BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (218 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q15T22 Two component transcriptional regulator, LuxR fa... 284 1e-75 UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobact... 276 4e-73 UniRef50_Q52376 Response regulator gacA n=286 Tax=Gammaproteobac... 261 1e-68 UniRef50_Q1QVM5 Two component transcriptional regulator, LuxR fa... 235 8e-61 UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobact... 229 7e-59 UniRef50_B3PFS2 GacA n=1 Tax=Cellvibrio japonicus Ueda107 RepID=... 221 2e-56 UniRef50_A5WFD3 Two component transcriptional regulator, LuxR fa... 204 2e-51 UniRef50_Q700Q1 GacA protein n=3 Tax=Gammaproteobacteria RepID=Q... 200 4e-50 UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ecto... 198 9e-50 UniRef50_A1WT06 Two component transcriptional regulator, LuxR fa... 195 8e-49 UniRef50_Q21J15 Response regulator receiver n=1 Tax=Saccharophag... 192 6e-48 UniRef50_A6W0B9 Two component transcriptional regulator, LuxR fa... 191 2e-47 UniRef50_UPI0001699909 response regulator n=1 Tax=Endoriftia per... 184 1e-45 UniRef50_B6J0B9 Response regulator n=18 Tax=Coxiella burnetii Re... 181 2e-44 UniRef50_B2STP5 Transcriptional regulator LuxR/uhpA family n=22 ... 176 4e-43 UniRef50_B5JUM2 Two component transcriptional regulator, LuxR fa... 172 5e-42 UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR fa... 172 6e-42 UniRef50_D0L1Q4 Two component transcriptional regulator, LuxR fa... 171 1e-41 UniRef50_B4EXV5 Response regulator n=4 Tax=Gammaproteobacteria R... 168 9e-41 UniRef50_D2U148 Two-component system, NarL family, invasion resp... 167 3e-40 UniRef50_Q1H354 Two component transcriptional regulator, LuxR fa... 165 9e-40 UniRef50_Q47H95 Two component transcriptional regulator, LuxR fa... 165 1e-39 UniRef50_Q2BNZ3 Transcriptional regulator, LuxR family protein n... 164 1e-39 UniRef50_A1K960 Probable transcriptional regulator, LuxR family ... 164 3e-39 UniRef50_A9NCJ1 Transcriptional regulator n=7 Tax=Coxiella burne... 163 4e-39 UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR fa... 162 8e-39 UniRef50_C6WV69 Two component transcriptional regulator, LuxR fa... 162 1e-38 UniRef50_C0N6H7 Response regulator receiver domain protein n=1 T... 161 1e-38 UniRef50_B1Y743 Two component transcriptional regulator, LuxR fa... 160 3e-38 UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR fa... 160 3e-38 UniRef50_Q2BNR9 DNA-binding response regulator, LuxR family prot... 159 5e-38 UniRef50_C4KAM8 Two component transcriptional regulator, LuxR fa... 159 7e-38 UniRef50_C5UZV9 Two component transcriptional regulator, LuxR fa... 158 1e-37 UniRef50_A1TVD4 Two component transcriptional regulator, LuxR fa... 158 1e-37 UniRef50_D0LYS4 Two component transcriptional regulator, LuxR fa... 157 3e-37 UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovib... 155 6e-37 UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 ... 154 2e-36 UniRef50_B8FDP3 Two component transcriptional regulator, LuxR fa... 153 4e-36 UniRef50_C7RMN3 Two component transcriptional regulator, LuxR fa... 153 4e-36 UniRef50_B1Y741 Two component transcriptional regulator, LuxR fa... 153 5e-36 UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR fa... 151 1e-35 UniRef50_Q47FR0 Two component transcriptional regulator, LuxR fa... 151 1e-35 UniRef50_B2JSN3 Two component transcriptional regulator, LuxR fa... 151 1e-35 UniRef50_C6XAP6 Two component transcriptional regulator, LuxR fa... 151 2e-35 UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrh... 150 2e-35 UniRef50_Q2IIQ2 Two component transcriptional regulator, LuxR fa... 150 3e-35 UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium ... 150 4e-35 UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa... 150 4e-35 UniRef50_C5V4R9 Two component transcriptional regulator, LuxR fa... 149 9e-35 UniRef50_Q1H353 Two component transcriptional regulator, LuxR fa... 149 9e-35 UniRef50_Q5NZZ3 Two-component system response regulator n=3 Tax=... 148 1e-34 UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92... 148 2e-34 UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betapro... 148 2e-34 UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR fa... 147 2e-34 UniRef50_Q024Y7 Two component transcriptional regulator, LuxR fa... 147 3e-34 UniRef50_C4ZL17 Two component transcriptional regulator, LuxR fa... 146 5e-34 UniRef50_C5V5K1 Two component transcriptional regulator, LuxR fa... 145 9e-34 UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 145 1e-33 UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas fl... 145 1e-33 UniRef50_B8ET67 Two component transcriptional regulator, LuxR fa... 145 1e-33 UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa... 145 1e-33 UniRef50_Q2Y9N3 Two component transcriptional regulator, LuxR fa... 145 1e-33 UniRef50_A0L9F1 Two component transcriptional regulator, LuxR fa... 144 2e-33 UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga t... 144 2e-33 UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas... 144 2e-33 UniRef50_B6JD38 Two component transcriptional regulator, LuxR fa... 144 3e-33 UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa... 143 4e-33 UniRef50_B9XL75 Two component transcriptional regulator, LuxR fa... 143 4e-33 UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR fa... 143 4e-33 UniRef50_A6GLU5 Two-component response regulator n=1 Tax=Limnoba... 143 5e-33 UniRef50_B8G137 Two component transcriptional regulator, LuxR fa... 142 6e-33 UniRef50_B9XC41 Two component transcriptional regulator, LuxR fa... 142 9e-33 UniRef50_C7QC31 Two component transcriptional regulator, LuxR fa... 141 1e-32 UniRef50_B8GAC9 Two component transcriptional regulator, LuxR fa... 141 1e-32 UniRef50_B8FX94 Two component transcriptional regulator, LuxR fa... 141 1e-32 UniRef50_Q39C19 Two component transcriptional regulator, LuxR fa... 140 2e-32 UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 ... 140 3e-32 UniRef50_Q0A525 Two component transcriptional regulator, LuxR fa... 140 3e-32 UniRef50_C1TL94 Response regulator containing a CheY-like receiv... 140 4e-32 UniRef50_C7I0E4 Two component transcriptional regulator, LuxR fa... 139 7e-32 UniRef50_C1A5E6 NarL family two-component response regulator n=1... 138 1e-31 UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Sele... 138 1e-31 UniRef50_C6BTX3 Two component transcriptional regulator, LuxR fa... 138 1e-31 UniRef50_A2SCN0 Two-component response regulator n=1 Tax=Methyli... 138 1e-31 UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomyceta... 138 2e-31 UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa... 137 2e-31 UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsoni... 137 2e-31 UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 ... 137 4e-31 UniRef50_A5FQU5 Two component transcriptional regulator, LuxR fa... 136 4e-31 UniRef50_B0TSG4 Two component transcriptional regulator, LuxR fa... 136 4e-31 UniRef50_C1DSJ1 Two-component response regulator, LuxR family n=... 136 5e-31 UniRef50_Q0EZ33 Regulatory protein, LuxR:Response regulator rece... 136 5e-31 UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus... 136 6e-31 UniRef50_A1K2Y1 DNA-binding response regulator n=7 Tax=Betaprote... 136 6e-31 UniRef50_A7HA46 Two component transcriptional regulator, LuxR fa... 135 1e-30 UniRef50_A2SLK8 Two component transcriptional regulator, LuxR fa... 135 1e-30 UniRef50_D2Q2Q8 Two component transcriptional regulator, LuxR fa... 135 1e-30 UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR fa... 134 1e-30 UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR fa... 134 2e-30 UniRef50_A1ASJ5 Two component transcriptional regulator, LuxR fa... 134 2e-30 UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Ta... 134 2e-30 UniRef50_Q39TN7 Two component transcriptional regulator, LuxR fa... 134 3e-30 UniRef50_C6CGT1 Two component transcriptional regulator, LuxR fa... 134 3e-30 UniRef50_Q13QW9 Two component transcriptional regulator, LuxR fa... 133 4e-30 UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr... 133 4e-30 UniRef50_A8UE45 Two component transcriptional regulator, LuxR fa... 133 4e-30 UniRef50_C1A5H1 Putative NarL family two-component response regu... 133 4e-30 UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepI... 133 5e-30 UniRef50_D1BTX1 Two component transcriptional regulator, LuxR fa... 133 5e-30 UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti... 133 5e-30 UniRef50_Q21Y82 Two component transcriptional regulator, LuxR fa... 133 5e-30 UniRef50_D1NYD9 Response regulator UvrY n=4 Tax=Providencia RepI... 132 6e-30 UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistip... 132 7e-30 UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillac... 132 7e-30 UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa... 132 8e-30 UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=... 132 9e-30 UniRef50_A6BYP5 Response regulator receiver domain protein n=1 T... 132 1e-29 UniRef50_A9AX03 Two component transcriptional regulator, LuxR fa... 132 1e-29 UniRef50_Q470N3 Two component transcriptional regulator, LuxR fa... 131 1e-29 UniRef50_D1C1C8 Two component transcriptional regulator, LuxR fa... 131 2e-29 UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Baci... 131 2e-29 UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa... 131 2e-29 UniRef50_C8WSR5 Two component transcriptional regulator, LuxR fa... 130 2e-29 UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=... 130 2e-29 UniRef50_A7LKW1 Putative two component transcriptional regulator... 130 2e-29 UniRef50_C6C961 Two component transcriptional regulator, LuxR fa... 130 3e-29 UniRef50_C8WS10 Two component transcriptional regulator, LuxR fa... 130 3e-29 UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR fa... 130 3e-29 UniRef50_C4XNR8 NarL family two-component response regulator n=1... 130 4e-29 UniRef50_B1M5J4 Two component transcriptional regulator, LuxR fa... 130 4e-29 UniRef50_Q021D5 Two component transcriptional regulator, LuxR fa... 130 4e-29 UniRef50_B4CWX5 Two component transcriptional regulator, LuxR fa... 130 4e-29 UniRef50_C7MRK0 Response regulator containing a CheY-like receiv... 129 5e-29 UniRef50_A9B5L0 Two component transcriptional regulator, LuxR fa... 129 5e-29 UniRef50_B9TGG7 Response regulator uvrY, putative n=1 Tax=Ricinu... 129 6e-29 UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa... 129 7e-29 UniRef50_C0QJ84 Two-component response regulator protein n=1 Tax... 129 9e-29 UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=... 128 1e-28 UniRef50_C4ZM15 Two component transcriptional regulator, LuxR fa... 128 1e-28 UniRef50_C6C0G1 Two component transcriptional regulator, LuxR fa... 128 1e-28 UniRef50_A8MF72 Two component transcriptional regulator, LuxR fa... 128 1e-28 UniRef50_C7RBI1 Two component transcriptional regulator, LuxR fa... 127 2e-28 UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR fa... 127 2e-28 UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=... 127 3e-28 UniRef50_A4VLT5 DNA-binding response regulator, LuxR family n=15... 127 3e-28 UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR fa... 127 3e-28 UniRef50_C7RKP7 Two component transcriptional regulator, LuxR fa... 127 3e-28 UniRef50_C1I7X4 Two-component system response regulator n=1 Tax=... 127 3e-28 UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibac... 127 3e-28 UniRef50_B7AAT6 Two component transcriptional regulator, LuxR fa... 127 3e-28 UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR fa... 127 3e-28 UniRef50_A4J6C2 Two component transcriptional regulator, LuxR fa... 127 3e-28 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 127 3e-28 UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=... 127 3e-28 UniRef50_UPI00018507A5 two component LuxR family transcriptional... 127 3e-28 UniRef50_B8EMC5 Two component transcriptional regulator, LuxR fa... 127 4e-28 UniRef50_C0N6J7 Sigma-70, region 4 family n=1 Tax=Methylophaga t... 126 4e-28 UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa... 126 4e-28 UniRef50_D1AAU8 Two component transcriptional regulator, LuxR fa... 126 5e-28 UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 T... 126 5e-28 UniRef50_C6DD36 Two component transcriptional regulator, LuxR fa... 126 6e-28 UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa... 126 6e-28 UniRef50_B2KBW2 Two component transcriptional regulator, LuxR fa... 126 6e-28 UniRef50_A5FIE9 Two component transcriptional regulator, LuxR fa... 126 7e-28 UniRef50_D1C6S1 Two component transcriptional regulator, LuxR fa... 125 7e-28 UniRef50_A5URU4 Two component transcriptional regulator, LuxR fa... 125 7e-28 UniRef50_P0AGA8 Transcriptional regulatory protein uhpA n=167 Ta... 125 8e-28 UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromon... 125 8e-28 UniRef50_B3E9K5 Two component transcriptional regulator, LuxR fa... 125 9e-28 UniRef50_C9M9U6 Response regulator GacA n=1 Tax=Jonquetella anth... 125 9e-28 UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides... 125 9e-28 UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR fa... 125 1e-27 UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=M... 125 1e-27 UniRef50_A1SKW0 Two component transcriptional regulator, LuxR fa... 125 1e-27 UniRef50_C3BGJ6 Two component transcriptional regulator, LuxR n=... 125 1e-27 UniRef50_A3K876 Two-component response regulator n=2 Tax=Rhodoba... 125 1e-27 UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC... 124 2e-27 UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut... 124 2e-27 UniRef50_A1WN26 Two component transcriptional regulator, LuxR fa... 124 2e-27 UniRef50_Q3BU15 Two-component system response regulator, LuxR fa... 124 2e-27 UniRef50_Q023R1 Two component transcriptional regulator, LuxR fa... 124 2e-27 UniRef50_A5G586 Two component transcriptional regulator, LuxR fa... 124 2e-27 UniRef50_A6WBE1 Two component transcriptional regulator, LuxR fa... 124 2e-27 UniRef50_Q3K943 Putative LuxR family response regulator n=4 Tax=... 124 3e-27 UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa... 123 3e-27 UniRef50_C7MUJ2 Response regulator containing a CheY-like receiv... 123 3e-27 UniRef50_A8UHM3 Two-component response regulator n=1 Tax=Flavoba... 123 4e-27 UniRef50_A4CPM8 Regulatory protein, LuxR:Response regulator rece... 123 4e-27 UniRef50_C1A9U5 NarL family two-component response regulator n=1... 123 4e-27 UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiob... 123 4e-27 UniRef50_A9B192 Two component transcriptional regulator, LuxR fa... 123 4e-27 UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=... 123 5e-27 UniRef50_B9JLI1 Two-component response regulator protein n=1 Tax... 123 5e-27 UniRef50_A1VB77 Two component transcriptional regulator, LuxR fa... 122 7e-27 UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ... 122 7e-27 UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding... 122 7e-27 UniRef50_Q11YW8 Two component transcriptional regulator, LuxR fa... 122 7e-27 UniRef50_Q1LE49 Two component transcriptional regulator, LuxR fa... 122 7e-27 UniRef50_D2QF32 Two component transcriptional regulator, LuxR fa... 122 7e-27 UniRef50_Q11VM8 Two-component response regulator n=1 Tax=Cytopha... 122 7e-27 UniRef50_C7MN84 Response regulator containing a CheY-like receiv... 122 8e-27 UniRef50_B6WQV4 Putative uncharacterized protein n=1 Tax=Desulfo... 122 8e-27 UniRef50_A8LG56 Two component transcriptional regulator, LuxR fa... 122 9e-27 UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacilla... 122 9e-27 UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR fa... 122 1e-26 UniRef50_Q1YTG7 Regulatory protein, LuxR:Response regulator rece... 122 1e-26 UniRef50_C6W2Z0 Two component transcriptional regulator, LuxR fa... 122 1e-26 UniRef50_C6E3E1 Two component transcriptional regulator, LuxR fa... 122 1e-26 UniRef50_C1TQ52 Response regulator containing a CheY-like receiv... 121 1e-26 UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family prot... 121 1e-26 UniRef50_B8GUD1 Two component transcriptional regulator, LuxR fa... 121 1e-26 UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR fa... 121 1e-26 UniRef50_A1AUQ3 Two component transcriptional regulator, LuxR fa... 121 2e-26 UniRef50_A2SD01 Two-component response regulator n=3 Tax=Betapro... 121 2e-26 UniRef50_B1ZKP8 Two component transcriptional regulator, LuxR fa... 121 2e-26 UniRef50_C6W645 Two component transcriptional regulator, LuxR fa... 121 2e-26 UniRef50_Q1IT25 Two component transcriptional regulator, LuxR fa... 120 2e-26 UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. ora... 120 3e-26 UniRef50_A0NNP3 Response regulator containing a CheY-like receiv... 120 3e-26 UniRef50_Q1AST2 Two component transcriptional regulator, LuxR fa... 120 3e-26 UniRef50_C7LQH4 Two component transcriptional regulator, LuxR fa... 120 3e-26 UniRef50_C1ZGK9 Response regulator containing a CheY-like receiv... 120 3e-26 UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium... 120 3e-26 UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR fa... 120 3e-26 UniRef50_B2G7N1 Two component response regulator n=7 Tax=Lactoba... 120 4e-26 UniRef50_A9DM99 Transcriptional regulator, LuxR family protein n... 120 4e-26 UniRef50_C6VXG6 Two component transcriptional regulator, LuxR fa... 119 5e-26 UniRef50_C9YCL5 Putative uncharacterized protein n=1 Tax=Curviba... 119 5e-26 UniRef50_A6GQJ8 Two component transcriptional regulator, LuxR fa... 119 5e-26 UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiob... 119 5e-26 UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 ... 119 6e-26 UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi... 119 7e-26 UniRef50_B0C756 Two-component transcriptional regulator, LuxR fa... 119 7e-26 UniRef50_C5C7H0 Response regulator containing a CheY-like receiv... 119 8e-26 UniRef50_C6Y109 Response regulator receiver n=1 Tax=Pedobacter h... 119 9e-26 UniRef50_C7MLQ9 Response regulator containing a CheY-like receiv... 119 1e-25 UniRef50_UPI0001B502C9 two component LuxR family transcriptional... 119 1e-25 UniRef50_C4ZEG3 Two-component response regulator (Extracellular ... 118 1e-25 UniRef50_Q24Z68 Putative uncharacterized protein n=1 Tax=Desulfi... 118 1e-25 UniRef50_C7PMV2 Two component transcriptional regulator, LuxR fa... 118 1e-25 UniRef50_D1CF52 Two component transcriptional regulator, LuxR fa... 118 2e-25 UniRef50_A9AZR3 Two component transcriptional regulator, LuxR fa... 118 2e-25 UniRef50_C0GF31 Two component transcriptional regulator, LuxR fa... 118 2e-25 UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteri... 118 2e-25 UniRef50_C7IMN9 Two component transcriptional regulator, LuxR fa... 118 2e-25 UniRef50_C1B8T3 NarL family two-component response regulator n=6... 118 2e-25 UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 ... 117 2e-25 UniRef50_Q72LA2 Probable two-component response regulator n=1 Ta... 117 2e-25 UniRef50_A0LVS2 Two component transcriptional regulator, LuxR fa... 117 2e-25 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 117 2e-25 >UniRef50_Q15T22 Two component transcriptional regulator, LuxR family n=4 Tax=Alteromonadales RepID=Q15T22_PSEA6 Length = 214 Score = 284 bits (727), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 134/215 (62%), Positives = 175/215 (81%), Gaps = 1/215 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +LLVDDHELVR GIRRILED++G VVGEA+ GE+AVK+CR NA D+VLMDMSMPGI Sbjct: 1 MIKILLVDDHELVRTGIRRILEDVQGFVVVGEATTGEEAVKFCRKNAPDLVLMDMSMPGI 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GGLEAT++I R + + ++I+L+VH ENP+PAKVM+ GA GYL+K + P+E+ AIR V + Sbjct: 61 GGLEATKQILRFSENTRVIVLSVHKENPIPAKVMRMGAFGYLTKDSDPKEMELAIRKVAA 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 GQ+Y++ DIAQQ+A+ ++ +PF SLSEREL+I LM+TKG KV +I++ LN+S KT Sbjct: 121 GQKYVSPDIAQQIAIGALDFSDG-NPFESLSERELEITLMLTKGSKVPDIAKFLNISAKT 179 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETL 215 VN++RYRMF KLN+ DVELTHLA+RH L N+E L Sbjct: 180 VNTHRYRMFEKLNVSTDVELTHLALRHKLINSENL 214 >UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobacteria RepID=GACA_PSEAE Length = 214 Score = 276 bits (705), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 128/214 (59%), Positives = 168/214 (78%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VL+VDDH+LVR GI R+L DI+G++VVG+A CGED +K R DVVLMD+ MPGI Sbjct: 1 MIKVLVVDDHDLVRTGITRMLADIEGLQVVGQADCGEDCLKLARELKPDVVLMDVKMPGI 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GGLEATRK+ RS D+K++++TV E+P P ++MQAGAAGY++KGA +E+V AIR V++ Sbjct: 61 GGLEATRKLLRSQPDIKVVVVTVCEEDPFPTRLMQAGAAGYMTKGAGLEEMVQAIRQVFA 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 GQRYI+ IAQQ+AL +P++ +SPF SLSERE+QI LMI KV IS++L LSPKT Sbjct: 121 GQRYISPQIAQQLALKSFQPQQHDSPFDSLSEREIQIALMIANCHKVQSISDKLCLSPKT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 VN+YRYR+F KL+I DVEL LA+RHG+ +A + Sbjct: 181 VNTYRYRIFEKLSITSDVELALLAVRHGMVDAAS 214 >UniRef50_Q52376 Response regulator gacA n=286 Tax=Gammaproteobacteria RepID=GACA_PSEU2 Length = 214 Score = 261 bits (668), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 125/212 (58%), Positives = 162/212 (76%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VL+VDDH+LVR GI R+L DI G++VVG+A GE+++K R DVVLMD+ MPGI Sbjct: 1 MIKVLVVDDHDLVRTGITRMLADIDGLQVVGQADSGEESLKKARELKPDVVLMDVKMPGI 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GGLEATRK+ RS D+K++ +TV E+P P +++QAGAAGY++KGA E+V AIR V++ Sbjct: 61 GGLEATRKMLRSHPDIKVVAVTVCEEDPFPTRLLQAGAAGYMTKGAGLAEMVQAIRLVFA 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 GQRYI+ IAQQ+AL +P+ SPF LSERE+QI LMI QKV IS++L LSPKT Sbjct: 121 GQRYISPQIAQQLALKSFQPQVNNSPFDLLSEREIQIALMIVGCQKVQTISDKLCLSPKT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 VN+YRYR+F KL+I DVEL LA+RHG+ +A Sbjct: 181 VNTYRYRIFEKLSISSDVELALLAVRHGMVDA 212 >UniRef50_Q1QVM5 Two component transcriptional regulator, LuxR family n=29 Tax=Gammaproteobacteria RepID=Q1QVM5_CHRSD Length = 214 Score = 235 bits (600), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 112/212 (52%), Positives = 154/212 (72%), Gaps = 2/212 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VL+ DDH LVR I R+L+ G+KV+ EA GE+AV R D+VLMD+ MPGI Sbjct: 1 MIKVLVADDHHLVRTSIARMLDSEDGLKVIAEAVDGEEAVNMARELRPDIVLMDIRMPGI 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GGLEATRKI R +D+K++++T E ++M AGAAG++SKG E+V AIR+++ Sbjct: 61 GGLEATRKIMRGMSDIKVVIVTAFLEEAFAQRLMDAGAAGFISKGTELDEMVRAIRAIFD 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 GQRYI+ DIAQ++ LS++ + ++PF LS RELQ+ +MI QKV++IS++L LSPKT Sbjct: 121 GQRYISPDIAQKVVLSKMGTQ--DNPFDQLSHRELQVAMMIVNCQKVSDISDRLFLSPKT 178 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 VN+YRYR+F KLN+ DVELTHL +R+GL + Sbjct: 179 VNTYRYRIFEKLNVQSDVELTHLGLRYGLIDG 210 >UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobacteria RepID=Q5ZS73_LEGPH Length = 225 Score = 229 bits (583), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 105/207 (50%), Positives = 155/207 (74%), Gaps = 1/207 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 +I VL+VDDH LVR GIRR+LED+ + VV +A GE A+ + +T++ DVVL+DM MPGI Sbjct: 7 LIKVLIVDDHALVRMGIRRLLEDMSDVDVVADAESGEQALAYVKTHSPDVVLLDMKMPGI 66 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G E TR++ ++ ++K+I +T +PLP +V+Q GA GYL+K + +E+ +AIR V Sbjct: 67 DGWEVTRRLKKTNPNIKVIAVTAICSDPLPTRVLQLGAMGYLTKESGAEEMAAAIRKVAK 126 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G++Y++++IAQ+MA++ ++ E +SPF LSERE+Q+MLMIT G V +I+++L LS KT Sbjct: 127 GEKYLSAEIAQKMAINSLQ-ESQDSPFDLLSEREMQVMLMITSGMNVQDIADRLFLSSKT 185 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRH 207 +N YRYRMF KL I DVELT+LA++H Sbjct: 186 INGYRYRMFEKLGIKNDVELTYLAMKH 212 >UniRef50_B3PFS2 GacA n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PFS2_CELJU Length = 217 Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 110/216 (50%), Positives = 147/216 (68%), Gaps = 1/216 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 M +L+VDDH+LVR GI R+L DI G +VVG+A GE+AV R DVVLMD+ MPG+ Sbjct: 1 MTKILVVDDHDLVRMGIVRMLADIDGYQVVGDAKSGEEAVTKARILKPDVVLMDVKMPGM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GGLEAT+K+ +KII +T ++ P ++MQAGA GY++KGA E+ AI V Sbjct: 61 GGLEATKKLLTVNPAIKIIAVTACDDDLYPTRLMQAGAVGYVTKGADFTEITDAINKVTR 120 Query: 121 GQRYIASDIAQQMALSQIE-PEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 G Y+++ IAQQ+AL ESPF LS+RELQ ++I GQKVN+I+ +SPK Sbjct: 121 GDLYMSNSIAQQLALRTFSGANNQESPFEKLSQRELQTAMLIANGQKVNDIANTFCVSPK 180 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETL 215 TVNSYRYR+F KL+I+ DVELT LA++H L + E + Sbjct: 181 TVNSYRYRIFEKLDINSDVELTLLAVKHNLLDPEAV 216 >UniRef50_A5WFD3 Two component transcriptional regulator, LuxR family n=3 Tax=Psychrobacter RepID=A5WFD3_PSYWF Length = 211 Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 96/209 (45%), Positives = 146/209 (69%), Gaps = 1/209 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VL+VDDH+LVR GI R+L D I+V+GEA GE A++ + + DVVL+D++MP I Sbjct: 1 MIKVLVVDDHDLVRMGISRMLADDPEIEVIGEADSGEAAIRMVKALSPDVVLLDVNMPNI 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GG+E T+++ + VKI+ ++ + P P+ +++AG GY++KG E++ AI+ VY Sbjct: 61 GGVETTKRLRQFDEKVKILAVSSVSSQPYPSMLLKAGVNGYITKGTPLDEMIKAIKKVYQ 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G +Y +SD+A+Q+A + + ESPF LSERE Q+ +M+ Q +I++QL +S KT Sbjct: 121 GSKYFSSDVAEQLA-DMLLTDNEESPFDRLSEREKQVAMMVVNCQSPQQIADQLFVSVKT 179 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 VN+YRYR+F K+ + DV+LTHLA+RHGL Sbjct: 180 VNTYRYRIFEKVGVDSDVKLTHLAMRHGL 208 >UniRef50_Q700Q1 GacA protein n=3 Tax=Gammaproteobacteria RepID=Q700Q1_PSEPU Length = 176 Score = 200 bits (508), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 105/212 (49%), Positives = 136/212 (64%), Gaps = 38/212 (17%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VL+VDDH+LVR GI R+L DI G Sbjct: 1 MIRVLVVDDHDLVRTGITRMLADIDG---------------------------------- 26 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 LEATRK+ RS D+K++ +TV E+P P +++QAGAAGYL+KGA E+V AIR ++ Sbjct: 27 --LEATRKLLRSHPDIKVVAVTVCEEDPFPTRLLQAGAAGYLTKGAGLDEMVQAIRVAFA 84 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 GQRYI+ IAQQ+AL +P+ SPF +LSERE+QI LMI QKV IS++L LSPKT Sbjct: 85 GQRYISPQIAQQVALKSFQPQG--SPFDALSEREIQIALMIVGCQKVQIISDKLCLSPKT 142 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 VN+YRYR+F KL++ DVELT LA+RHG+ +A Sbjct: 143 VNTYRYRIFEKLSVTSDVELTLLAVRHGMVDA 174 >UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ectothiorhodospiraceae RepID=B8GSX5_THISH Length = 220 Score = 198 bits (504), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 103/212 (48%), Positives = 149/212 (70%), Gaps = 4/212 (1%) Query: 1 MINVLLVDDHELVRAGIRRILED---IKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSM 57 MI+VLLVDDHELVR GIR +L++ + GI+VVGEA GE+A+ + DVVLMD++M Sbjct: 1 MIDVLLVDDHELVRMGIRGLLDERAAVTGIQVVGEAHSGEEALVEAKRLKPDVVLMDINM 60 Query: 58 PGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRS 117 PGIGGL ATR+I + VK+++LT E P+P V++AGA+GYL+KG +E+++AI+ Sbjct: 61 PGIGGLVATRRIVEAQPSVKVLVLTAMDEGPVPRWVLEAGASGYLTKGCRIEEMIAAIQG 120 Query: 118 VYSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 G+R+I+ +AQ++AL + + +PF LS RE QI+LMI +GQ I+ LN+S Sbjct: 121 AMQGERHISPAVAQRLALGGLAKGQA-NPFDELSGRERQILLMILQGQTPQAIATALNIS 179 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 PKTV++Y+ R+ KL I D++L LA +HGL Sbjct: 180 PKTVSTYKCRVMGKLGISNDMQLVTLAAQHGL 211 >UniRef50_A1WT06 Two component transcriptional regulator, LuxR family n=1 Tax=Halorhodospira halophila SL1 RepID=A1WT06_HALHL Length = 216 Score = 195 bits (496), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 97/214 (45%), Positives = 140/214 (65%), Gaps = 1/214 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI V+L DDH L+R I +L DI I++V A E AV R DVVLMD+ MPG+ Sbjct: 1 MIRVVLADDHRLIRQAIDGMLRDIPDIQIVAHAENAEHAVAAVREQEPDVVLMDLQMPGM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GG+EA R++ RS V +I LTV+ P PA ++AGA GY+ KGA E++ AIRSVY Sbjct: 61 GGVEAIRRLYRSHPKVGVIALTVYQSGPYPAHALRAGAKGYVHKGADRDELIEAIRSVYL 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+RYI ++A+ +AL+ ++ ESPF L+ RE ++++ I GQ+ I++ L LSPKT Sbjct: 121 GRRYICHEVARHVALNSLD-GTGESPFDHLTPREFEVLMRILNGQRGTSIAKDLCLSPKT 179 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 V++YR R+F +L + D +LT +AI +GL A++ Sbjct: 180 VSTYRSRIFERLGVRNDAQLTRIAIDYGLLEAKS 213 >UniRef50_Q21J15 Response regulator receiver n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21J15_SACD2 Length = 198 Score = 192 bits (488), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 99/194 (51%), Positives = 138/194 (71%), Gaps = 3/194 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 M +L+ DDH+LVR GI R+L D++GI+VVGEA GEDAV+ R A DV+LMD+ MPG+ Sbjct: 1 MTKILVADDHDLVRMGIVRMLSDVEGIEVVGEACNGEDAVRLARELAPDVILMDVKMPGM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GGLEATRKI ++ + KII +T +++ P ++M+AGAAGY++KGA +E+V+AIR+V + Sbjct: 61 GGLEATRKIHQACSGCKIIAVTALSDDLFPERLMKAGAAGYVTKGAGFEEIVNAIRTVLN 120 Query: 121 GQRYIASDIAQQMALSQIEPEK-TESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 G Y++S IAQQ+AL K + SPF LSERELQ +MI +KV+EI+E +SPK Sbjct: 121 GDLYMSSSIAQQLALRNFGSSKGSASPFEQLSERELQTAIMIANSKKVHEIAEAFCVSPK 180 Query: 180 --TVNSYRYRMFSK 191 V + Y + SK Sbjct: 181 RSIVTATAYSISSK 194 >UniRef50_A6W0B9 Two component transcriptional regulator, LuxR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W0B9_MARMS Length = 213 Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 101/207 (48%), Positives = 144/207 (69%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 M+ VL+VDDH++V GI R+L+D+KG++VVG GE+A+ + D++LMD+ MPGI Sbjct: 1 MLKVLIVDDHDVVSQGISRVLQDVKGVEVVGVVHSGEEAIIQSKILLPDIILMDVHMPGI 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GGL AT++I R KII L+ +N P K+++AGA+GYL+KG E++ AI+ V Sbjct: 61 GGLGATKEIKRILPKTKIIALSALDDNLYPVKLLEAGASGYLTKGTNTSELLEAIQMVSK 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+ YI+ IAQ+MALS+ + SP LS+RELQ+ MI +K NEI+E L +SPKT Sbjct: 121 GEHYISKSIAQKMALSKFSIDGQGSPLGQLSDRELQVAQMIVDCKKSNEIAEHLCVSPKT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRH 207 V++YR R+F+KLNI DVEL LA+R+ Sbjct: 181 VSTYRTRIFTKLNIESDVELIRLAVRY 207 >UniRef50_UPI0001699909 response regulator n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001699909 Length = 181 Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 83/169 (49%), Positives = 124/169 (73%), Gaps = 1/169 (0%) Query: 41 KWCRTNAVDVVLMDMSMPGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAG 100 +WC ++ DVVLMD++MPGIGG+EATR++ R D+K++ LT+ P PA++ + GA G Sbjct: 6 RWCSSDRPDVVLMDVNMPGIGGIEATRRLLRIAPDLKVVALTMLDNEPFPARLNEVGAMG 65 Query: 101 YLSKGAAPQEVVSAIRSVYSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLM 160 YL+KG E++ AIRSV+ GQ +++SD+A++ L+ + + +PF LS RE Q+MLM Sbjct: 66 YLTKGCPADEMIQAIRSVFRGQPFVSSDVARKHILTDWK-RHSATPFQGLSSRETQVMLM 124 Query: 161 ITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 I +GQ+ EIS+ L+LSPKTV++YR R++ KL++ DVELT LA RHG+ Sbjct: 125 ILEGQRNQEISDGLSLSPKTVSTYRQRIYEKLDVRNDVELTRLAYRHGI 173 >UniRef50_B6J0B9 Response regulator n=18 Tax=Coxiella burnetii RepID=B6J0B9_COXB2 Length = 240 Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 92/217 (42%), Positives = 147/217 (67%), Gaps = 2/217 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 +I+VLL++DH L+R G+R +LE IKGI++VGEAS GE+ + R VV++D +P Sbjct: 24 LISVLLIEDHVLIRRGMRLMLEQIKGIRIVGEASTGEEGLALRREKEPGVVILDFQLPDT 83 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GLE R++ R ++KI+++T LP ++++ G G+++K + E+ AIR+V+S Sbjct: 84 NGLELARRLLRRDPEIKILVVTAMEGELLPMRLLEVGVRGFITKSSDSAELERAIRAVHS 143 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 GQRYI S IA ++ALS+ K SPF LS R+++++L++ KG I++QL+++ KT Sbjct: 144 GQRYIGSAIASRLALSKTTAAK--SPFDQLSNRQMEVLLLLAKGMNAESIAKQLHITAKT 201 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLSS 217 VNS+RYRMF KL + DVEL LA+++GL + + +S Sbjct: 202 VNSHRYRMFEKLGVKNDVELIKLAVQYGLIDIDKTTS 238 >UniRef50_B2STP5 Transcriptional regulator LuxR/uhpA family n=22 Tax=Xanthomonadaceae RepID=B2STP5_XANOP Length = 215 Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 86/210 (40%), Positives = 139/210 (66%), Gaps = 2/210 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V L+DDH LVR G++ IL + VVGEA GE A+ R D+VL D+ +PG+ Sbjct: 3 IRVFLIDDHALVRTGMKMILSKEVDVCVVGEAESGEAALPQIRQLKPDIVLCDLHLPGVS 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLE T +I + ++I+++V + PLP ++++AGA+GY+ KG E++ A+R V G Sbjct: 63 GLEITERIVKGDYGTRVIIVSVLEDGPLPKRLLEAGASGYVGKGGDAHELLRAVREVALG 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 +RY+ + IAQ +ALS + E SPF +LS REL++ L++T+G + +I+++LNLS KT+ Sbjct: 123 RRYLGNTIAQNLALSNL--EGGGSPFDALSPRELEVALLLTQGLRQEDIAKRLNLSAKTI 180 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 N+++ R+F K+ I ++ L LA ++GL + Sbjct: 181 NTHKARLFEKVGIQDNIALARLANQYGLTD 210 >UniRef50_B5JUM2 Two component transcriptional regulator, LuxR family n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JUM2_9GAMM Length = 223 Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 86/210 (40%), Positives = 138/210 (65%), Gaps = 4/210 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAV-DVVLMDMSMPG 59 MI +LLV+D +LVR ++ +LE I VVGE GE A+ +CR NA+ DV+LMD+ MPG Sbjct: 1 MIRLLLVEDQDLVRYAVKGLLEGEGSICVVGECDSGESALSYCRENALPDVILMDLHMPG 60 Query: 60 IGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVY 119 IGG+EA+ I + + +I++LT +E+PLP +M+ G GY++K ++P+E+ AI V Sbjct: 61 IGGIEASHAILQEHPNARILILTGQSESPLPKHLMELGVYGYITKKSSPREMQQAISQVS 120 Query: 120 SGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 +G RY++ D AQ++AL +P +LS RE+++++ I G EI + + +SPK Sbjct: 121 AGHRYLSQDEAQRLALGG---SGASNPLDALSRREMELLIKIALGCTNREIQKHMQVSPK 177 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 T+++YR R+ KL+ DVEL +A ++G+ Sbjct: 178 TISTYRTRLMEKLDAKSDVELARIAQQYGV 207 >UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfobacteraceae RepID=B8FFJ9_DESAA Length = 212 Score = 172 bits (437), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 85/211 (40%), Positives = 139/211 (65%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VLL DDH +VRAG+RRI+ED + IKV+ EAS G++A+ + DV ++D+SMPGI Sbjct: 1 MIRVLLADDHVIVRAGLRRIIEDSEDIKVIVEASNGKEAIDLTLEHCPDVAVVDISMPGI 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GLE ++ D+ +++LT+H E + ++AGA GY++K +AP+++V+AIR ++S Sbjct: 61 DGLEVVSRLHAELPDLPMLILTMHEEEQYVVRAIEAGAMGYMTKKSAPEQLVTAIRKLHS 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G R++ + A+ +AL K S SLS+RELQ++ + G EI++ ++S KT Sbjct: 121 GSRFLTEEAAELLALRVSRWSKGGSLLDSLSKRELQVLRHLASGHTNREIADSYHISVKT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V++YR R+ KLN+ + +++ AI++ L N Sbjct: 181 VDTYRARLLKKLNLRNNADISRFAIQNNLIN 211 >UniRef50_D0L1Q4 Two component transcriptional regulator, LuxR family n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1Q4_HALNC Length = 212 Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 88/208 (42%), Positives = 134/208 (64%), Gaps = 2/208 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI V+LVDDH +VR + ++ +GI V EA GE A+ +T VDVVL D+ MPG+ Sbjct: 1 MIRVMLVDDHTMVRKALAHLIGSEQGIGVTSEADSGEAALALLKTETVDVVLCDIHMPGM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GGLEA R+I ++ +I +T + L V++AG GY++K A PQE+++AI + Sbjct: 61 GGLEAIRRIQARYPEIGLIAVTAEADAALARSVLEAGVHGYVTKDAPPQELITAIENARH 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 R+I+S IAQ++AL + KT PF +LS RE Q+++MI +G+ IS+ L +SPKT Sbjct: 121 KIRFISSRIAQEIALQSM--RKTADPFETLSGREQQVLMMILEGKSNQFISDALCVSPKT 178 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHG 208 V++Y+ R+ KL ++ D+EL LA++ G Sbjct: 179 VSTYKVRLQEKLGVNNDIELLRLAVKSG 206 >UniRef50_B4EXV5 Response regulator n=4 Tax=Gammaproteobacteria RepID=B4EXV5_PROMH Length = 219 Score = 168 bits (426), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 84/214 (39%), Positives = 141/214 (65%), Gaps = 3/214 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MIN L++ E+ GI ++L IK I + + +A ++CR +V++++ S+P + Sbjct: 1 MINTLVISQVEIFSLGIEKLLCQIKKINIRKIMNDESEAFRYCRQYSVNLIIF-YSLPTV 59 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 ++ ++I R + +KI++++ ++ L ++Q G G++ ++ V+ AIR V Sbjct: 60 SLIDVIKRIKRFSPIIKIVVISPKIDSILSVTLLQLGIEGFIVIDSSAANVLQAIRQVCI 119 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 GQRYI+ +IA +AL++++ + +P LSERELQIM MI +G+K+ +I+++LN+S KT Sbjct: 120 GQRYISPEIAMDIALTKVQADL--NPLHHLSERELQIMSMIIRGKKIAQIAQELNISTKT 177 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 VNSYRYRMFSKL I GDVELTH+A+R+GL E+ Sbjct: 178 VNSYRYRMFSKLKISGDVELTHIAVRYGLIEIES 211 >UniRef50_D2U148 Two-component system, NarL family, invasion response regulator UvrY n=1 Tax=Arsenophonus nasoniae RepID=D2U148_9ENTR Length = 204 Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 83/200 (41%), Positives = 126/200 (63%), Gaps = 1/200 (0%) Query: 16 GIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGLEATRKIARSTAD 75 G++ I + KG+K+ G A++WCR + +++L++ ++ + + R D Sbjct: 2 GMQSIFDKTKGMKIAGHVVSLNQAIQWCRKHTAEIILLNGRTSDYELIKKLQSLIRMIPD 61 Query: 76 VKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQRYIASDIAQQMAL 135 + IIM + +N K ++AGA G LS A +++ AIR V Q+Y++ DIAQ + L Sbjct: 62 IGIIMYSTEKKNIYLMKALEAGARGILSVKAKESDLLHAIRVVKLKQKYLSPDIAQWLVL 121 Query: 136 SQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIH 195 Q+E E + +P LS+RELQIMLM+T+G V EI++QLNL+ KT+NSYRYRMFSKL + Sbjct: 122 HQLETEMS-NPLNLLSDRELQIMLMVTRGVPVGEIAKQLNLNTKTINSYRYRMFSKLKVR 180 Query: 196 GDVELTHLAIRHGLCNAETL 215 DVELTH+AI +GL E+ Sbjct: 181 SDVELTHIAITNGLIQTESF 200 >UniRef50_Q1H354 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=Q1H354_METFK Length = 213 Score = 165 bits (418), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 83/211 (39%), Positives = 131/211 (62%), Gaps = 2/211 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I ++LVDDHE+VR+G+RR+LE G++V+ EA GE A ++ + DV++MDMSMPG+G Sbjct: 5 IRIMLVDDHEVVRSGLRRLLEQNDGVEVIAEADSGEQAYQFYGEHMPDVIVMDMSMPGMG 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLEA R+I ++I+ ++H ++ + AGA Y++K A ++V A+R V G Sbjct: 65 GLEALRRIIARYPQARVIIFSMHENAAFASQALGAGARAYVAKSGAADDLVQAVREVAQG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + Y++ IAQQ+AL + ++ P LS RE ++ ++ G+ V EIS L +S KTV Sbjct: 125 KGYLSPGIAQQIALQTL--SGSDDPTRLLSAREFEVFRLLAAGKGVEEISTILKISQKTV 182 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 +Y+ + KL I +EL LAI+HG+ Sbjct: 183 ANYQTLLKQKLGITSPIELVRLAIKHGVIEG 213 >UniRef50_Q47H95 Two component transcriptional regulator, LuxR family n=9 Tax=cellular organisms RepID=Q47H95_DECAR Length = 215 Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 85/209 (40%), Positives = 132/209 (63%), Gaps = 3/209 (1%) Query: 4 VLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGL 63 +LL DDH +VR G R +LE G V+ E GE AV+ DVV+MD+SMPGIGGL Sbjct: 10 ILLADDHAVVRLGFRLLLEG-AGATVIAETDNGESAVRLYAETNPDVVVMDVSMPGIGGL 68 Query: 64 EATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQR 123 A ++ A +++ML+ H ++ +P + ++ GA GYL K AAP+E + A+ V + QR Sbjct: 69 VALERLLVWEAKARVLMLSAHNDDIVPIRALRLGARGYLCKRAAPEEFLRAVGQVAADQR 128 Query: 124 YIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVNS 183 YI ++AQ +AL+Q+ + +P +L+E+EL + L + +G+ VNE+++ LSP TV + Sbjct: 129 YIDPELAQAVALAQL--SGSANPVETLTEKELAVFLKLAEGRSVNEVADDFCLSPSTVGT 186 Query: 184 YRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 + Y + KLN+ ELT +A+R+GL A Sbjct: 187 HLYHIKQKLNVQNAAELTLVAVRNGLLEA 215 >UniRef50_Q2BNZ3 Transcriptional regulator, LuxR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNZ3_9GAMM Length = 223 Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 87/222 (39%), Positives = 138/222 (62%), Gaps = 14/222 (6%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI- 60 I +LLVDDH LVRAG +R+L + I++VGEA G+ A + ++ DVV+MD++MP Sbjct: 5 IKILLVDDHPLVRAGFQRLLISDESIEIVGEADNGQSACEMYASHMPDVVIMDLNMPSDA 64 Query: 61 ----------GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQE 110 GGLEA R+I K+++LT +P PA V+ AGA G+L+K AP E Sbjct: 65 NTEEMSNNLNGGLEAIRRIISHDPKAKVLVLTAMEIDPFPAHVVNAGAKGFLTKRCAPDE 124 Query: 111 VVSAIRSVYSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEI 170 ++ A++++++G+ YI +I ++ + ASL++RELQI ++ +G+ V+ + Sbjct: 125 LLEAVKAIHAGEEYITEEIRLRITEGG---SADGASLASLTKRELQIFSLLAEGRTVSIV 181 Query: 171 SEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 +E++ LSPKTV+++R +F KL I + EL HLAIRH + A Sbjct: 182 AEEMFLSPKTVHAHRTNIFRKLKISNNSELVHLAIRHNIVQA 223 >UniRef50_A1K960 Probable transcriptional regulator, LuxR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K960_AZOSB Length = 209 Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 136/209 (65%), Gaps = 1/209 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 M+ VL+ DDH +VR G+R+ L + +V EA+ G+ A++ RT+ DVVL+D+++P + Sbjct: 1 MVKVLIADDHAVVRGGLRQFLSSTEEFDIVAEAANGQTALELVRTSGCDVVLLDITLPDL 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GLE ++I RS D+ +++ ++ +E+ + AGA+GYL+K + P ++++A+ +V + Sbjct: 61 NGLEVLKRIKRSKPDLPVLIFSMFSEDEFALPALNAGASGYLNKDSPPAQILAALHTVVA 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G RY++ +A+++ + P K P +LS RE+ ++L+++KG + I EQ +LS KT Sbjct: 121 GARYVSPSLAERLLAGTMSPGK-RLPHENLSPREMAVLLLLSKGVPLTRIGEQFHLSVKT 179 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 +++YR R+ KL++ + E+T ++H L Sbjct: 180 ISTYRARILEKLDLASNAEITRYVLQHKL 208 >UniRef50_A9NCJ1 Transcriptional regulator n=7 Tax=Coxiella burnetii RepID=A9NCJ1_COXBR Length = 211 Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 80/211 (37%), Positives = 133/211 (63%), Gaps = 1/211 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI+VL+VDD +LVR ++ +L+D G+KV+GEA GE A+ R +V+L+D+ +P Sbjct: 1 MISVLIVDDEQLVREALKLLLKDASGVKVIGEAETGEMALASAREKRPNVILLDVHLPDF 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GL ++K+ R + K+I+LT ++++ G YL+K A +E++ AI+ V Sbjct: 61 SGLYISQKLLRQYPETKVIILTSEKNKTFSRRLLEVGVHSYLTKEAEQEELIQAIKEVQK 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+R I+ IA Q+A+S++ + S+S+RE++I+LM+ +G I+++L+LSPKT Sbjct: 121 GKRIISPKIASQLAISKMTSQ-VSGVLDSISDREMEILLMMVRGVPTETIAQKLHLSPKT 179 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V++YR +F KLN+ D EL L +R GL Sbjct: 180 VSTYRVAIFKKLNVKNDAELILLGMRQGLLQ 210 >UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR family n=10 Tax=Proteobacteria RepID=Q1GZT3_METFK Length = 215 Score = 162 bits (410), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 84/211 (39%), Positives = 137/211 (64%), Gaps = 3/211 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V++ DDH ++R G+++IL + + I+VV +A +A+K T +DVV++D+S+P Sbjct: 7 IKVVIADDHAILREGLKQILAETEDIEVVADAKNAAEAIKLAGTKGLDVVVLDISLPDRS 66 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA I + V ++ML++H E+ + ++AGA GYLSK +A ++V+AIR+V G Sbjct: 67 GIEACNIIKKEHPGVAVLMLSMHREDAYAIRALRAGAVGYLSKQSASDQLVTAIRTVAKG 126 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFA-SLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 ++YI++++A +AL+ E P +LS RE Q + MI G V+EI+E L+LS KT Sbjct: 127 KKYISAEVA--LALADQVSGGLEKPIHDTLSNREFQTLTMIASGLSVSEIAENLSLSVKT 184 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V+ YR R+ KLN+ + ELTH AI++ L + Sbjct: 185 VSMYRARLLEKLNLRHNAELTHYAIKNNLID 215 >UniRef50_C6WV69 Two component transcriptional regulator, LuxR family n=2 Tax=Betaproteobacteria RepID=C6WV69_METML Length = 216 Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 78/210 (37%), Positives = 136/210 (64%), Gaps = 1/210 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V++ DDH ++RAG+++IL + + I V+ EA +A+K DV+L+D+S+P Sbjct: 8 IKVIIADDHAILRAGLKQILSETEDILVIAEAQNANEAIKLGSQPEADVLLLDISLPDRS 67 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA + I R + + ++ML++H E+ + +++GAAGYL K +A E+V+AI++V G Sbjct: 68 GMEALKYIKRENSHIAVLMLSMHREDEYAIRALKSGAAGYLCKQSASSELVNAIQTVARG 127 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 ++YI ++A+ +A +QI + ++P LS+RE Q +MI G V +++ +L+LS KTV Sbjct: 128 KKYITPEVAEILA-NQIGRDDQKAPHELLSDREYQTFIMIASGLSVTDVANKLSLSVKTV 186 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 + YR R+ K+ + + ELTH A +H L + Sbjct: 187 SMYRARLLEKMQLKHNAELTHYAFKHNLVS 216 >UniRef50_C0N6H7 Response regulator receiver domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6H7_9GAMM Length = 214 Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 81/208 (38%), Positives = 135/208 (64%), Gaps = 2/208 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V+LVDDH +VR+G+ R+LE I VVGEA GE A + + DV++MDMSMPG+G Sbjct: 5 IRVMLVDDHAVVRSGLCRLLEQNTDISVVGEAESGEQAYQTYPEISPDVLVMDMSMPGMG 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLEA R+I + K+IM ++H + + AGA GY++K +++V A+R V SG Sbjct: 65 GLEAVRRILNRWSGAKVIMFSMHENATYAIQSLTAGAMGYVAKSGHAEDLVKAVREVKSG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + +++SD+A ++AL + + ++P L+ RE ++ ++ +G+ V++I+ +LN+ KTV Sbjct: 125 KSFLSSDMAHKVALQSLAGD--DNPTQRLTSREFEVFRLLAEGKLVDDIASRLNIGQKTV 182 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 +Y+ + KL IH V+L LA+++G+ Sbjct: 183 ANYQTSLKQKLGIHSPVDLVRLAMKYGV 210 >UniRef50_B1Y743 Two component transcriptional regulator, LuxR family n=6 Tax=Bacteria RepID=B1Y743_LEPCP Length = 211 Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 80/210 (38%), Positives = 133/210 (63%), Gaps = 1/210 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + V + DDH +VR G++++L V GEAS G + + C A DV ++D MPG G Sbjct: 3 MRVFIADDHPVVRQGLKQLLGAEADFSVAGEASSGHEVIDQCGRFAWDVAVLDYRMPGKG 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++ +++ + D +++L+V E+ +V++AGAAGYL+K +AP+++V+AIR V G Sbjct: 63 GIDLIKELRQRFPDRPVLVLSVCPEDQYAMRVLRAGAAGYLTKESAPEDLVNAIRKVARG 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 R++++ + +Q+ALS + E LS+RE QIM ++ G+KV EI++QL LSP T+ Sbjct: 123 GRFVSAALGEQLALS-LSTGGDEPLHCRLSDREYQIMWLLASGKKVGEIAQQLFLSPNTI 181 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++YR R+ KL++ + EL AI H L + Sbjct: 182 STYRKRILEKLDLKSNAELMRYAIGHQLVD 211 >UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR family n=30 Tax=root RepID=A1WBJ7_ACISJ Length = 239 Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 79/211 (37%), Positives = 135/211 (63%), Gaps = 1/211 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI + +VDDH +VRAG+R+ L + ++VVGEAS G +A+ R + +DV++MD+SMPG Sbjct: 30 MIKIGIVDDHAIVRAGLRQFLSEHVDLRVVGEASNGREAIDLVRVHEIDVLVMDLSMPGQ 89 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GL+A + D+ I++L+ + E +++ GA+GYL+K P+E+V AIR++ Sbjct: 90 SGLDALAMLRAKAPDMGILILSGYPEEHYAINLIRQGASGYLNKECEPKEIVEAIRTIAL 149 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+RY+ +A +A Q+ + P LSERE Q+ L + KG+ +I++ L+LS KT Sbjct: 150 GRRYLTPSVADLLA-QQLNRKDDAPPHEQLSEREFQVFLKLAKGETAGDIAKSLSLSVKT 208 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V++YR R+ K+ + + +LT+ A+++ L + Sbjct: 209 VSTYRTRLMEKMGLSSNSDLTYYALKNKLID 239 >UniRef50_Q2BNR9 DNA-binding response regulator, LuxR family protein n=2 Tax=Neptuniibacter caesariensis RepID=Q2BNR9_9GAMM Length = 214 Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 79/213 (37%), Positives = 134/213 (62%), Gaps = 2/213 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +++ DDH +VR G +L + V EA G+ A C++++ DVV+MD++M GI Sbjct: 1 MKIVIADDHAVVRQGYASLLSAMLAPCEVLEAGNGDQAYSLCQSDSPDVVIMDVNMQGIS 60 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR+I + D +I+ +++ E P+ + ++AGA GY++K P+ ++ A++ V +G Sbjct: 61 GIEATRRILQKKPDTRILFFSMYDEIPVVTQALEAGAKGYITKSCTPEILIEAVKKVSAG 120 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Q Y+ ++A ++A+S+ PE+ + +++RE +I +M+ +G V EISEQL +S KTV Sbjct: 121 QLYVEHELAMRLAVSR--PEQKDKRLKEMTQREFEIFVMLAQGSNVKEISEQLCISSKTV 178 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 ++Y + SKLNI EL HLAI GL T Sbjct: 179 SNYTAILKSKLNIGSTAELVHLAIETGLVKVGT 211 >UniRef50_C4KAM8 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=C4KAM8_THASP Length = 217 Score = 159 bits (402), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 88/208 (42%), Positives = 128/208 (61%), Gaps = 3/208 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +LL DDH +VR G R +LE G +VVGEA CGE AV+ DV+LMD+SMPGIG Sbjct: 10 LRILLADDHAVVRMGFRLLLEG-AGAEVVGEADCGEAAVQAFGQLHPDVLLMDVSMPGIG 68 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GL A ++ +++ML+ H + +PA+ ++AGA GYLSK A P E++ A+ +V G Sbjct: 69 GLGALERVLAHHPAARVLMLSAHDDAQIPARALRAGAGGYLSKRAHPDELLHAVATVARG 128 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 QRYI D A AL+ + P A+L+E+E + L + +G+ V EI+E +LSP TV Sbjct: 129 QRYI--DPAIAPALALAQFAGGGDPVAALTEKEFAVFLQLARGRSVAEIAETHSLSPSTV 186 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 ++ Y + KL + EL +A+R GL Sbjct: 187 GTHLYHIKQKLEVSNAAELALVAVRCGL 214 >UniRef50_C5UZV9 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZV9_9PROT Length = 213 Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 78/210 (37%), Positives = 133/210 (63%), Gaps = 1/210 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +L+VDDH L+R G++++LED +K+ GEAS G +A+ R D++L+D+++P Sbjct: 1 MIQILVVDDHALIRKGLKQLLEDTPDLKITGEASSGTEAISMLRAAPFDLMLLDINLPDK 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+E ++ +KII+L+++ E+ + ++AGA GY++K +A ++ AIR V S Sbjct: 61 HGIEVLKQFKSEQPQLKIIILSMYPEDQYGVRALKAGAMGYINKQSASDVLIKAIRHVLS 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G++YI+ +A+Q+ L+ + E E +LS RE Q + ++ G+ ++EIS+ + LSPKT Sbjct: 121 GKKYISEILAEQL-LNNLIGESQELMHQNLSNREYQTLCLMASGKTLSEISQIMALSPKT 179 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 V+ YR RM +K+ + E H AI H L Sbjct: 180 VSVYRSRMLAKMTFTNNAEAIHYAITHRLV 209 >UniRef50_A1TVD4 Two component transcriptional regulator, LuxR family n=9 Tax=Burkholderiales RepID=A1TVD4_ACIAC Length = 209 Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 80/209 (38%), Positives = 134/209 (64%), Gaps = 1/209 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI+V+L DDH ++R GIR L + I+V GEA + + R DV+L+D++MPG Sbjct: 1 MIHVVLCDDHAVLRRGIRDTLTEAPDIQVTGEAGGYSELREILRKAPCDVLLLDLNMPGR 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GLE + + + +K+++++++ E+ + ++AGA GY +K P E++ A+R+V Sbjct: 61 SGLEVLSSLKETDSAIKVLVVSMYPEDQYALRCLRAGAQGYANKAGDPMELIEAVRTVMK 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G++Y+ ++AQ +A S +P E P +LSERELQ ++ I G+++++I+E+L LSPKT Sbjct: 121 GRKYLTPEVAQMLADSLAQP-APELPHEALSERELQTLVKIASGKRLSDIAEELMLSPKT 179 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 V+ YR R+ KL + + ELT AIR+ L Sbjct: 180 VSVYRSRVLEKLKLSNNAELTVYAIRNQL 208 >UniRef50_D0LYS4 Two component transcriptional regulator, LuxR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS4_HALO1 Length = 212 Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 80/208 (38%), Positives = 129/208 (62%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI + + DDH L+R G+RR+L + I+VVGEAS G +AV+ + A DV+L+D++MP Sbjct: 1 MIKIAIADDHALLREGMRRMLSQSELIEVVGEASNGAEAVEVVKEKAPDVLLLDITMPVK 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EAT I + KI++L++H + + ++AGA G++SKGA +E++ AI V+ Sbjct: 61 DGIEATADILALNVNTKILILSMHADEQYALRTLRAGANGFISKGARLEELLKAITDVHE 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 GQRY+ IA A I P+ + +LS+RE Q+M + +G EI+ L +S KT Sbjct: 121 GQRYLPDKIATSFAERHIRPDAEKPLVETLSKREFQVMTHLAQGMTNREIAGVLQISVKT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHG 208 V+++R + KL + + ++T AI+HG Sbjct: 181 VDTHRSHVLKKLELRNNSDITRFAIQHG 208 >UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR2_THEYD Length = 213 Score = 155 bits (393), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 77/208 (37%), Positives = 128/208 (61%), Gaps = 1/208 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + VL+VDDH L R G++ IL D IK EA G +A+ + D+V +D++M I Sbjct: 5 LKVLIVDDHTLFRKGLKEILLDTPYIKECKEAKSGYEAIDILSKESFDIVFLDIAMSDIN 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+E +KI + KI+ML+++ E + ++ GA+GYL+K A P+E++ A+ + G Sbjct: 65 GIETLKKIKILYPETKILMLSMYPEEQYAIRSLKCGASGYLTKSADPEELLKAVDKIIKG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 +Y+ ++++ L I+ + P LSERE Q+ LMI KG+ + EIS++L++S KTV Sbjct: 125 GKYLPHTFSEKL-LHYIDKSEDIPPHEKLSEREFQVFLMIAKGKSLIEISKELSISIKTV 183 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 ++YR R+ KL + + E+ + AI+HGL Sbjct: 184 STYRARILEKLGLENNAEIINYAIKHGL 211 >UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 Tax=Methylococcus capsulatus RepID=Q60AR8_METCA Length = 215 Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 76/208 (36%), Positives = 127/208 (61%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V+LVDDH +VRAG R +L I+VVGEA GE+A + DV++MD+S+PGIG Sbjct: 5 ITVMLVDDHAVVRAGYRLLLSGTPNIEVVGEAERGEEACQLYADTRPDVIVMDLSLPGIG 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GL + R+I +I++ ++H E + ++AGA GY++K AP+ +V A+ + SG Sbjct: 65 GLASIRRIRSRDTSARILVFSIHDELIYVVRALEAGARGYITKSCAPEILVEAVARIASG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + ++ +IAQ++A+ + + + +LS RE + L++ KG E++E+L L KTV Sbjct: 125 ESFLEPEIAQRLAMQTLGGAEATTALNTLSAREFDVFLLLAKGYTTREVAEELRLGYKTV 184 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 +Y + SKL ++ E+ LA ++G+ Sbjct: 185 ANYSTLIKSKLGVNTTAEMARLAYQNGI 212 >UniRef50_B8FDP3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDP3_DESAA Length = 219 Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 73/210 (34%), Positives = 132/210 (62%), Gaps = 2/210 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +L+ +DH LVR G++ ++ +VVGEA G A++ R D++L+D+SMP + Sbjct: 6 IKILITEDHALVRKGLKSLISSRSEFQVVGEADNGLAAIEMTRKCKPDLILLDLSMPKMN 65 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GL R++ + +VKI+++T+H ++ GA GYL KG PQE+ AIR++ G Sbjct: 66 GLATMRQLKKERPEVKILVITMHASQDYLIPALKEGADGYLLKGDDPQELFMAIRAIMDG 125 Query: 122 QRYIASDIAQQMALSQIEPEKTES--PFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 + Y++SD++ Q+ S I P+ E+ P ASL++RE ++ ++ +G +I++ L +SPK Sbjct: 126 KAYLSSDLSGQLIHSVINPDTREAADPLASLTQREKEVFQLVAEGNTNQQIADLLFISPK 185 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 TV+ +R + KL++H E+++ A+++G+ Sbjct: 186 TVDKHRTNLMKKLDLHSAREVSNFALKNGI 215 >UniRef50_C7RMN3 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMN3_9PROT Length = 213 Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 131/210 (62%), Gaps = 2/210 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +LLVDDH +VR G+R +L ++VV EA E A+ R N DV L+D+ +PG G Sbjct: 6 LQILLVDDHAVVRGGLRLLLAQTDDMEVVSEAENAEQAISMIRQNEFDVALVDIGLPGKG 65 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GL+ ++I + ++ML+++ E + ++AGA+GYL+K + P +++AIR V G Sbjct: 66 GLDLLKQIKAERPRIAVLMLSMYAEEVYAVRALKAGASGYLTKNSPPGTLLAAIRKVAGG 125 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 R+++ + +Q+A+ + K+ S +LS+RE++++ + G+ + +I+E L+LSPKTV Sbjct: 126 GRHVSPALLEQLAVEVGQGRKSASD--ALSDREIEVLRRLASGESLTQIAEALHLSPKTV 183 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 +YR R+ K +H + ELT A+ G+ + Sbjct: 184 TTYRARIVEKTGLHSNAELTRYALDKGMLS 213 >UniRef50_B1Y741 Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y741_LEPCP Length = 205 Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 76/204 (37%), Positives = 127/204 (62%), Gaps = 1/204 (0%) Query: 6 LVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGLEA 65 + DDH +VR +R+IL + VV EA G++A+ R+ D+ L+D SMPG GL Sbjct: 1 MADDHPVVRQRLRQILMAEPALTVVAEAGDGDEALALARSTDWDLALLDFSMPGCSGLSL 60 Query: 66 TRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQRYI 125 + R +++L+VH E L V++AGA+GYL K A ++++ AIR+V +G ++ Sbjct: 61 IEHVRRDFPQRPVLVLSVHDEQLLAPHVLRAGASGYLCKECATEQLIQAIRAVTAGGTHV 120 Query: 126 ASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVNSYR 185 ++ +AQ++A Q+ E +P LS+RE ++M +++ G+ + EI+++L+L P+TV SYR Sbjct: 121 SAPVAQRLAW-QVAIESGGAPHERLSDREYRVMWLLSSGRHIVEIAQELHLRPRTVASYR 179 Query: 186 YRMFSKLNIHGDVELTHLAIRHGL 209 +R+ KL +H EL A+RH L Sbjct: 180 HRVLRKLGLHDTAELVSYAVRHEL 203 >UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiaceae RepID=Q1LEP5_RALME Length = 214 Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 81/213 (38%), Positives = 128/213 (60%), Gaps = 2/213 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI V++ DDH +VR G+R ILE +VVGEA+ G + + R + V+L+D+SMPG Sbjct: 1 MIRVIIADDHTVVRNGLRHILERTSDFEVVGEAARGTEVPQLVRELSPHVILLDLSMPGR 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GLE R++ ++I++LT+H E + +AGAAGYL+K +A E+V A+R V + Sbjct: 61 NGLELIRQLRTDHPALRILVLTMHAEEQYVVRAFRAGAAGYLTKESAATELVEALRKVAA 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G Y++ +A+++AL EK ++P LS+REL++ I G+ + +I+ L +S KT Sbjct: 121 GGTYVSPAMAEKLALGL--QEKPDAPHEGLSDRELEVFRRIVDGESLTQIAAALCVSAKT 178 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 V++Y+ R+ KL + D L AI L E Sbjct: 179 VSTYKMRLMEKLQLRSDAALVRYAIEARLFGDE 211 >UniRef50_Q47FR0 Two component transcriptional regulator, LuxR family n=9 Tax=Betaproteobacteria RepID=Q47FR0_DECAR Length = 218 Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 77/211 (36%), Positives = 126/211 (59%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI L+ DDH+++R G++ IL D I V EAS G +A+ R D +++D++MPG Sbjct: 1 MIRTLIADDHDILRIGLKHILSDTGDIVVTAEASNGIEALVELRKGTFDALVLDLTMPGR 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+E ++I + I++L++H E+ + ++AGA+GYL K +A + AIR V Sbjct: 61 NGIELIKQIKGEFPKLPILILSMHKEDIYAVRSLKAGASGYLCKDSAETLLADAIRKVAD 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G +I +A+++ L + T++P L++RE QI LMI +G V EI QLNLS KT Sbjct: 121 GGLFINQAVAEKLTLQILHGRDTDAPHTGLTDREHQIFLMILQGLGVTEIGRQLNLSVKT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V++++ + +K+N+ EL AI+H L + Sbjct: 181 VSTHKASILAKMNLRNSAELVRYAIQHRLID 211 >UniRef50_B2JSN3 Two component transcriptional regulator, LuxR family n=28 Tax=Proteobacteria RepID=B2JSN3_BURP8 Length = 210 Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 129/210 (61%), Gaps = 4/210 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +L+ DDH +VR G+++I+ I V EA+ G + V RT AVD++L+DM+MPGI Sbjct: 1 MIRILIADDHAIVRGGLKQIIATTNDIVVAAEAAQGSEVVDKLRTCAVDLLLLDMTMPGI 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G++ R++ + +++L++H E + ++ ++AGA GYL+K + P +++AIR + Sbjct: 61 SGVDLIRRVRAEQPALPVLVLSIHDEAQVASRALRAGATGYLTKDSDPDVLLAAIRKLAD 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTE-SPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 G R+I + M E + + P LS+RE Q++ M+ G+ +NEI++ LS K Sbjct: 121 GGRFIDPKLVDAMVF---ETHRGDMPPHEVLSDREFQVLQMLAAGKSINEIADICALSAK 177 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 T+++++ R+ KL + + E+ AIRHGL Sbjct: 178 TISTHKMRLMQKLGLANNAEVIRYAIRHGL 207 >UniRef50_C6XAP6 Two component transcriptional regulator, LuxR family n=3 Tax=cellular organisms RepID=C6XAP6_METSD Length = 214 Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 127/212 (59%), Gaps = 2/212 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 +I VLLVDDH +VR+G+ R+LE GIKVV EA GE A + DV +MD+SMPG+ Sbjct: 5 IIRVLLVDDHTVVRSGLCRLLEQHSGIKVVAEAESGEQAYQVFGEYLPDVTVMDLSMPGM 64 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GGLEA R+I ++++ ++H + +++GA GY++K + E+V A+ V Sbjct: 65 GGLEAMRRILARYRTARVLIFSMHENAAFAMQTLKSGARGYVAKTGSFDELVKAVVEVAR 124 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+ YI++ IAQ++AL + + + LS RE ++ + +G+ EI+E L +S KT Sbjct: 125 GKSYISTSIAQKIALQTVIGDG--DLISQLSPREFEVFRLFAEGKNAEEIAEVLKISQKT 182 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 V +Y + KL + VE+ AI+HGL ++ Sbjct: 183 VANYHTLVKQKLGLSNPVEMVRFAIKHGLIDS 214 >UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrhizobium RepID=Q89IF1_BRAJA Length = 217 Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 85/209 (40%), Positives = 119/209 (56%), Gaps = 2/209 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I+VLLVDDH +VR G RR+LE + VV EA DA + + DVV++D+SMPG Sbjct: 9 ISVLLVDDHPIVRQGYRRVLESQGDLHVVAEADNAADAYGAFKAHDPDVVVLDISMPGAS 68 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLEA R I + +I++ T+H E L AGA+G+++K + P VV+AIRSV G Sbjct: 69 GLEAIRNIRARSPRARILVFTMHNEAVLVKAAFSAGASGFVTKSSEPSAVVNAIRSVARG 128 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 +R ++ DIA +A + P T S L ERE++I+ G +I+ LNLS KTV Sbjct: 129 ERAMSDDIAHILADDSLSP--TGSVLDQLGEREIEILRQFAGGATTEQIATHLNLSVKTV 186 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 +Y Y + +K D +L LA GL Sbjct: 187 QNYHYLIKTKTGARTDAQLVRLAASCGLT 215 >UniRef50_Q2IIQ2 Two component transcriptional regulator, LuxR family n=3 Tax=Anaeromyxobacter RepID=Q2IIQ2_ANADE Length = 210 Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 80/211 (37%), Positives = 127/211 (60%), Gaps = 1/211 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 M+ +LL DDH + R+G+RRILE VGEA+ D + DV+L+D+SM G Sbjct: 1 MLRILLADDHAMFRSGLRRILEAEFPGASVGEAATIADVQERLGAQPWDVLLLDISMAGQ 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 L A + + +++L+++ + + ++AGA+ YL+K AP+E++ AIRSV + Sbjct: 61 NSLNALPPLKERHPRLPVVVLSMYGDRQFVIQALRAGASAYLTKERAPEELIRAIRSVLA 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+RY+ D+A+Q+A + T SP LS REL+I L + + V+EI+E+L LS KT Sbjct: 121 GRRYVGDDLAEQLA-DHLAGGGTGSPHERLSPRELEIFLQLAAARSVSEIAERLQLSVKT 179 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V++YR R+ K+ + + EL A+RHGL Sbjct: 180 VSTYRGRILEKMALRSNAELMQYAVRHGLVG 210 >UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1R6_THERP Length = 221 Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 86/215 (40%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLL DDH +VR G+R +LE I VVGEA ++AV+ RT DV ++D+SMPG Sbjct: 6 IRVLLADDHPIVRVGLRALLEAEPDIAVVGEAGTADEAVELARTLQPDVAVLDISMPG-N 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLEA R+IA + ++LTVH E V+QAG +GY+ K + ++V AIR V G Sbjct: 65 GLEALRRIASLGLPTRTLILTVHAEERYLLPVLQAGGSGYVRKSSLHTDLVEAIRLVARG 124 Query: 122 QRYIASDIAQQMALSQIEPEKT---ESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 + +I A+ + ++ +T + P LSERE +++ + G EI++QL LSP Sbjct: 125 EVFIDQAAARTLLQGYLDHARTGEVQDPAQLLSEREREVLRLTAAGYTAQEIADQLFLSP 184 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 KTV +YR+R+ KL EL A+R GL + + Sbjct: 185 KTVETYRHRVMQKLGFSRRSELVRFALRIGLLDPQ 219 >UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B1ZVM0_OPITP Length = 219 Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 77/214 (35%), Positives = 129/214 (60%), Gaps = 2/214 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + ++L DDH LVRAGIR +LE + G+ +VGEA G + V T A D+ +MD++MPG+ Sbjct: 5 LKIVLADDHALVRAGIRTLLEKLPGVTIVGEAGDGRETVTLVHTFAPDIAIMDITMPGLN 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G +AT +IAR K+++L++HT + ++AGA GYL K AA E+ A+ +V G Sbjct: 65 GFDATARIAREHPRTKVLILSMHTAEDYVLQALRAGATGYLLKDAATAELQLALNAVRKG 124 Query: 122 QRYIASDIAQQMA--LSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 + Y++ I++ + Q E + P +L+ R +I+ +I +G+ EI+ LNLS K Sbjct: 125 ETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIAFLLNLSVK 184 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 T+ ++R + ++L +H + A+R GL +A+ Sbjct: 185 TIETHRMHLMARLGLHDVAGVVRYALRTGLISAD 218 >UniRef50_C5V4R9 Two component transcriptional regulator, LuxR family n=2 Tax=Proteobacteria RepID=C5V4R9_9PROT Length = 211 Score = 149 bits (375), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 75/211 (35%), Positives = 131/211 (62%), Gaps = 2/211 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTN-AVDVVLMDMSMPG 59 MI +L+ DDH +VR GI++IL + I+V EA + +K DV+L+D+SMPG Sbjct: 1 MIRLLIADDHAIVREGIKKILALAQDIQVEAEAVDAIEVMKHLDDGVTFDVLLLDLSMPG 60 Query: 60 IGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVY 119 + G+ +I I++ ++H E + ++ ++AGAAG+++K + P+ ++ AIR V Sbjct: 61 VTGMSLITQIKAQYPAFPILIFSMHNEAQIASRAIKAGAAGFIAKDSDPEILLEAIRRVA 120 Query: 120 SGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 +G+ YI +A+QMA + P K+ +P A LS REL+I ++ G++VN+I+ LN+S K Sbjct: 121 AGRNYIDPALAEQMAFDALMPPKS-APHAILSSRELEIFALLVAGKRVNDIAYILNISNK 179 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 TV++++ + +K+ +H +L H A+ H L Sbjct: 180 TVSTHKLNLITKMKLHSTADLVHYALEHKLF 210 >UniRef50_Q1H353 Two component transcriptional regulator, LuxR family n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H353_METFK Length = 212 Score = 149 bits (375), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 75/207 (36%), Positives = 128/207 (61%), Gaps = 3/207 (1%) Query: 4 VLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGL 63 +LL DDH +VR+G+R +LE+ G +V+ EA GE A + + D+ ++D+ MPGIGGL Sbjct: 5 ILLADDHAVVRSGLRILLEN-AGYQVIAEAESGERACTLWQEHHPDLGILDLDMPGIGGL 63 Query: 64 EATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQR 123 E +I + ++I+ ++H +N A+ MQAGA GY+ K AP+ ++ A++ V G R Sbjct: 64 ETLHRIIARDRNARLIIFSMHNDNIYAARSMQAGARGYVVKTDAPEILLEAVKQVLRGGR 123 Query: 124 YIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVNS 183 YI ++AQ +A+ + P +E+P LS RE ++ I +G ++ I+E+L++ KT + Sbjct: 124 YIGHELAQHLAMDRFSP--SENPLEKLSPREFEVFRRIAEGISLSGIAEELHIGYKTAAN 181 Query: 184 YRYRMFSKLNIHGDVELTHLAIRHGLC 210 + ++ KLN+ +L H+AIR G+ Sbjct: 182 IQTQVRQKLNVQTTGQLVHIAIRFGIT 208 >UniRef50_Q5NZZ3 Two-component system response regulator n=3 Tax=Betaproteobacteria RepID=Q5NZZ3_AZOSE Length = 210 Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 77/211 (36%), Positives = 127/211 (60%), Gaps = 1/211 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +L+VDDH + R+G+RR+L D + V EAS G A+ R+ DV+LMD++M G Sbjct: 1 MIELLIVDDHTIFRSGLRRMLSDEADMHVADEASDGASALAKIRSGKFDVILMDINMAGR 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GL+ + ++ +IML+++ E ++A A YLSK PQE+++AIR V Sbjct: 61 SGLDTLESLRAERPELPVIMLSMYPEEQYAVLALRARANAYLSKDVEPQELLAAIRHVVG 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G RY++ A + L Q++ + +P L+ RE+Q+M+ I +G + ++ Q+ LS KT Sbjct: 121 GGRYVSPRSAANL-LMQMDRAREGAPHEKLTAREMQVMMKIVRGMSLTDVGVQMCLSVKT 179 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V++YR R+ KL++ + EL A+R+GL + Sbjct: 180 VSTYRMRILEKLSLSSNAELVQYAMRNGLLD 210 >UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92 Tax=Burkholderiales RepID=Q3JFS6_BURP1 Length = 282 Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 77/211 (36%), Positives = 126/211 (59%), Gaps = 1/211 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VL+ DDH LVR G+R IL++ G +V GEA + R+ V+++D+SMPG Sbjct: 68 MIKVLIADDHALVRDGLRHILQNASGYEVAGEAFDSATTIALVRSTPAQVLVLDLSMPGR 127 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+E ++I ++I++LT+H E + +AGA+GYL+K +A E+V A+ V S Sbjct: 128 NGVELIKQIKEEKPALRILVLTMHAEQQYAVRAFRAGASGYLTKESASSELVGAVTKVAS 187 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G Y++ +A++ A S EP +T P LS+RE + I GQ + +I+++L +S KT Sbjct: 188 GGVYVSLAMAERFAQSLNEPAET-LPHHRLSDREFDVFRRIASGQTLTQIADELCVSAKT 246 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V++Y+ R+ K+ + + L A+RH L + Sbjct: 247 VSTYKTRILEKMQMPHEAALVRYALRHKLID 277 >UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betaproteobacteria RepID=Q5NZX4_AZOSE Length = 211 Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 78/204 (38%), Positives = 130/204 (63%), Gaps = 2/204 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VL+ DDH LVR G++ + ++ ++VV EA+ G + + +T V+L+DMSMPG+ Sbjct: 1 MIRVLVADDHFLVREGLKMTIAAMQDVEVVAEATNGGEVLAAIKTCNAHVLLLDMSMPGL 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G++ R++ + I++L+++ E L AKV+Q+GA+GY++KG + ++SAIR V S Sbjct: 61 SGVDLVRRVKSEWPGLPILVLSMYGETQLAAKVLQSGASGYVTKGKGREILLSAIRKVAS 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G RYI D+A+++ P T S L+ RE QI+ M+ G+ V +I+ +L++SPKT Sbjct: 121 GHRYIDPDLAEKILFDVRMP--TASVQEQLTHRESQILRMLQAGKSVTQIANELSVSPKT 178 Query: 181 VNSYRYRMFSKLNIHGDVELTHLA 204 V++++ R KL+ +VEL A Sbjct: 179 VSTHKIRAMQKLHCQNNVELLKYA 202 >UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR family n=2 Tax=Frankia sp. EAN1pec RepID=A8L9Z7_FRASN Length = 218 Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 75/192 (39%), Positives = 115/192 (59%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLL DDH LV G+ +++ + G+ VVGEA+ GE AV T DVVLMD+ MPGIG Sbjct: 8 IRVLLADDHRLVLDGLSALIDSVDGLTVVGEATSGEQAVDLAGTEHPDVVLMDIEMPGIG 67 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR+I + + ++MLT++ E+ ++AGA GYL KGA ++VV I +V G Sbjct: 68 GVEATRRITTAQPTIAVVMLTMYGEDEFVFAALRAGARGYLLKGAQQKDVVRTIGAVARG 127 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 D+A ++ + P +PF L+ERE +++ ++ G + I+ L L+PKTV Sbjct: 128 DAVFGPDVAHRVLRTFTSPPAENAPFPELTEREREVLSLLANGWPNSRIARHLQLTPKTV 187 Query: 182 NSYRYRMFSKLN 193 + + +KL+ Sbjct: 188 ANNVSNILAKLH 199 >UniRef50_Q024Y7 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q024Y7_SOLUE Length = 225 Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 79/214 (36%), Positives = 134/214 (62%), Gaps = 5/214 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 +++LVDDH+LVR G+R ILE VVGEA G DAV+ C+ ++ D+VLMD+ +PG+ Sbjct: 3 FDIVLVDDHKLVRDGVRMILERGSEFLVVGEAENGADAVQLCKKSSPDIVLMDIGLPGMN 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EAT ++ R VK+I+L+++ + +++GA ++ K A+ E++ A+R+V G Sbjct: 63 GIEATTELLRHCPSVKVIILSMYDDENSVVSAIRSGARAFVLKKASSNELLDALRTVARG 122 Query: 122 QRYIASDIAQQMALSQIEPEKTE----SPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 Y++S ++ ++ L +I+ E SP SLS RELQ++ ++ +G+ +I+ L+L Sbjct: 123 GSYLSSQVSDRL-LQRIQRGDLETHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLLDLG 181 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 +TV SYR M KL ++ LT LA+ G+ + Sbjct: 182 LQTVRSYRKTMMKKLGVNNVAGLTQLALAAGITH 215 >UniRef50_C4ZL17 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZL17_THASP Length = 213 Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 78/212 (36%), Positives = 130/212 (61%), Gaps = 4/212 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +L+VDDH ++R G+R+++ V+GEASC A++ R ++ ++D+SMP Sbjct: 1 MKLLIVDDHPVMRFGVRQLVTQRWPDAVIGEASCLAQALEQVRAAEWELAVLDLSMPDTS 60 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLE ++ R+ ++++L++H E A+ +Q GAAGYL+K A E+V+AI V SG Sbjct: 61 GLEGLVRLHRAAPLTRLLVLSMHDEAAYAARALQLGAAGYLTKEHATTELVAAIERVRSG 120 Query: 122 QRYIASDIAQQMA--LSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 QRYI+SD+A ++A LS P + +P +LS +E +++L+I G +EI+E ++LS K Sbjct: 121 QRYISSDLAARLADLLSGEAPAR--APHETLSAQEYRVLLLIAAGHGASEIAEIMHLSVK 178 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 TV +YR R+ K + E+ HGL + Sbjct: 179 TVGTYRSRIIDKTGLANTAEMARYCSEHGLVD 210 >UniRef50_C5V5K1 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K1_9PROT Length = 211 Score = 145 bits (366), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 74/208 (35%), Positives = 131/208 (62%), Gaps = 1/208 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +++ DDHELVRAG+ ++ E GI+VVGEA GE+ ++ + VD+VL+D+ MPG Sbjct: 3 VRLIVTDDHELVRAGLLQLFEGAPGIEVVGEAVNGEELMRKLQATQVDLVLLDLDMPGEN 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G +I R D+ I++L+ H E + ++ +QAGA+GY+ K +P+ ++ AI V + Sbjct: 63 GANLIERIRRHYPDLLILILSAHDEIKVVSRAVQAGASGYICKDCSPKTLLEAIHKVVAT 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 +Y++ +A+++A + P+ S A LS RE +I ++ +G ++IS QL +S +TV Sbjct: 123 GKYLSPLMAEELAYTSAIPQANNS-LALLSSREQEIFRLLVEGLSNDDISRQLFISDRTV 181 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 ++++ + +KL + VEL H +I+H L Sbjct: 182 SAHKINLLNKLGLKNVVELVHYSIQHQL 209 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 81/215 (37%), Positives = 131/215 (60%), Gaps = 2/215 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +LLVDDH +VR G R +LE ++VVGEA GE+A+ R DV+LMD+SMPG+ Sbjct: 15 ITLLLVDDHPVVRKGTRELLEGEADLRVVGEAESGEEAILKARQLMPDVILMDVSMPGMN 74 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR I V I++LT + ++ +++AGAAGYL K A+ E++ A+R+V +G Sbjct: 75 GIEATRAIKAERPGVGILVLTSYDDDAYVFALLEAGAAGYLLKNASEDELLGAVRAVAAG 134 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFA-SLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 + + +A+++ L + +T +P +LS REL+++ + G+ EI+ L++SP+T Sbjct: 135 ESALHPAVARKV-LERFSTHQTPTPPEDALSPRELEVLRVAATGRTNKEIARDLDISPRT 193 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETL 215 V + +FSKL + E I+ G + +TL Sbjct: 194 VQVHLANIFSKLGVGSRTEAVLYGIKRGWIDPKTL 228 >UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1Z2_9FIRM Length = 209 Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 76/207 (36%), Positives = 125/207 (60%), Gaps = 2/207 (0%) Query: 5 LLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGLE 64 ++VDDH L+RAGI+ +L++ V EA GE+A++ +D+V+MD+SMPG+GGL Sbjct: 1 MIVDDHLLIRAGIKLLLKNTSAYTVTAEAESGEEALRLLAQQPIDLVIMDISMPGMGGLA 60 Query: 65 ATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQRY 124 R+I VKI++L++H + K MQ GA GYL K +A E+ A++ + G+RY Sbjct: 61 CIREIRAHYPAVKILVLSMHEDEEYIYKAMQYGAMGYLPKTSADNELFDALQVLSQGRRY 120 Query: 125 IASDIAQQMALSQIEP--EKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVN 182 ++ + Q + P E + P + L+ RE ++ + G + EI+EQL+LS KTV+ Sbjct: 121 LSPNAQQSLMDIMFRPAEEAADDPRSVLTAREREVFDELIHGYTITEIAEQLHLSVKTVD 180 Query: 183 SYRYRMFSKLNIHGDVELTHLAIRHGL 209 +++ ++ KL+ EL LA+R+GL Sbjct: 181 THKKHIYEKLHCSRRSELVTLALRNGL 207 >UniRef50_B8ET67 Two component transcriptional regulator, LuxR family n=12 Tax=Proteobacteria RepID=B8ET67_METSB Length = 223 Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 75/213 (35%), Positives = 130/213 (61%), Gaps = 6/213 (2%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 +LLVDDH +VR G R +L+ +KVV EA G +A + + D+V+MD++MPG+GG Sbjct: 6 TILLVDDHAIVREGYRALLQQQPRLKVVAEAGDGAEAYRLFKQVKPDLVIMDLTMPGLGG 65 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 +EA ++I + +I++ T+H + ++AGA GY++K + P+ ++ V G+ Sbjct: 66 VEAVKRIRQWDPAARILVFTMHQNAAFAVQAIRAGAKGYVTKSSPPEALIRGAFDVLQGR 125 Query: 123 RYIASDIAQQMALSQIEPEKTESPFAS--LSERELQIMLMITKGQKVNEISEQLNLSPKT 180 +++DI ++ALS++ TE+P A+ L+ RE +I+ ++ + I+ L LSPKT Sbjct: 126 IALSADIDHELALSRV----TETPTATDVLTPREFEILRLLLAEKSTEAIAAILGLSPKT 181 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 V + RY + +KL + D+EL +A+R G+ AE Sbjct: 182 VANTRYLIKAKLGVASDIELVLVALRQGILGAE 214 >UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=C6E2Z1_GEOSM Length = 216 Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 78/216 (36%), Positives = 126/216 (58%), Gaps = 2/216 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI V++VDDH +VR GIR +LE + VV EA G A + A VVLMDM+MPG+ Sbjct: 1 MIKVMVVDDHSIVREGIRILLERFPDLSVVAEADNGRKASELAADLAPHVVLMDMTMPGL 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G++AT+++ + +V++++L++H + ++ +AGA GYL K A E+V A+R V Sbjct: 61 NGIDATQRLLAACPEVRVLILSMHKDKRFVSQAFRAGARGYLLKDCASAELVQAVRQVAC 120 Query: 121 GQRYIASDIAQQMALSQIE--PEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 G+ Y+ I + + PE P L+ RE +++ +I +G + QLN++ Sbjct: 121 GEMYVCHGIIGVVVHDYVTRLPESLTQPEVPLTPREREVLQLIAEGNNAKNAAYQLNINV 180 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 KTV+++R ++ KL + ELT AIR GL + E+ Sbjct: 181 KTVDTHRQQIMKKLKMRSVAELTKYAIREGLISMES 216 >UniRef50_Q2Y9N3 Two component transcriptional regulator, LuxR family n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y9N3_NITMU Length = 211 Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 77/210 (36%), Positives = 122/210 (58%), Gaps = 1/210 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 +I L DDH L R G+RRIL + I VVGEA+ G DA+K R DV L+D+SMPG+ Sbjct: 2 IIKTFLADDHRLFRDGLRRILAETTDIVVVGEATDGLDALKKMRLGGWDVGLLDVSMPGM 61 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GLE ++I +I+ML+ + E+ + ++AG + YL+K + ++S IR + Sbjct: 62 NGLEVLQRIMDDDPKHRILMLSTYHEDEYAIRAIRAGTSAYLTKNSPTDLLISVIRRLAH 121 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G RYI +A+++ L + P T ++LS REL ++ +I G + EIS++L LS KT Sbjct: 122 GGRYIDPKLAEKL-LFDLGPSSTMPRHSALSNRELDVLKLIAVGISLTEISQKLKLSAKT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 +++YR R+ K+ + + +L H L Sbjct: 181 ISTYRARVLEKMGMQNNAQLIRYVAEHKLL 210 >UniRef50_A0L9F1 Two component transcriptional regulator, LuxR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9F1_MAGSM Length = 206 Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 72/210 (34%), Positives = 128/210 (60%), Gaps = 4/210 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +++ DDH + R G+ +L + +++VGEA G+DA++ R DV L+D+SMPG+ Sbjct: 1 MIRIIMADDHTIFRQGLAHLLSAHQELEIVGEAGRGDDALQLIRDLNPDVALLDISMPGL 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GL+ +++ ++++LT+H + L K QAGA GY+ K A E++ AI +V + Sbjct: 61 NGLDVVKRVVEEKRPTRLLLLTMHDDPTLAIKAEQAGALGYVVKDNAFSELLDAILAVAA 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+R+++ +A+++ E E+ + LS RE +++ ++ GQ EI+ L +SPKT Sbjct: 121 GKRFVSEVVAEKVN----ELERLDDLPVQLSPREKEVVRLVADGQTNKEIARSLGISPKT 176 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 V+++R R+ KLN+H ++ A+R GL Sbjct: 177 VDTHRTRLMRKLNLHTTADVVRYAMRMGLV 206 >UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N7Q7_9GAMM Length = 226 Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 73/211 (34%), Positives = 128/211 (60%), Gaps = 2/211 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 +I ++LVDDH +VR G R +L+ ++V+ EA G +A + D+V+MD+S+PG Sbjct: 4 VITIMLVDDHAIVREGYRSLLQKQDNLEVIAEACDGTEAYSQYKKYQPDIVVMDISLPGQ 63 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GL+A +I + A KI++ ++H + +AGA GY++K + P++++ AI V Sbjct: 64 SGLKAIERIRQFDAKAKILVFSMHQNPSFALQATRAGALGYITKSSDPEDLIRAIAEVAK 123 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 + +++DIAQ +A+ ++ E +S L+ RE +I+ ++ + +I+E LN+SPKT Sbjct: 124 NKHTLSADIAQALAMEKLGQE--QSALDELTVREFEILRLLVDAKSNQDIAELLNISPKT 181 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V++ Y + KL + D+ELT LAI+ L N Sbjct: 182 VSNSHYIIKKKLGVSSDIELTRLAIKMNLVN 212 >UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU8_DESAH Length = 219 Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 78/212 (36%), Positives = 133/212 (62%), Gaps = 4/212 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+ +DH +VR G+ +L I+VVGEA G +A+K A DVVLMD+SMP + Sbjct: 4 IKVLVAEDHTIVRKGLCSLLYSEPDIEVVGEAENGREAIKMVEELAPDVVLMDISMPELN 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++ATR++ + DVKI++L++H+ + ++AGA+GYL K +AP +++ AI + ++G Sbjct: 64 GMDATRQLKKKYPDVKILILSMHSTEEYIFETLRAGASGYLIKRSAPTDLIKAIHAAHAG 123 Query: 122 QRYIASDIAQQMALSQIEPEKTES----PFASLSERELQIMLMITKGQKVNEISEQLNLS 177 +++ I++++ + ++ ++ S LS RE +++ +I +G EI+ L +S Sbjct: 124 DCFLSPSISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANREIAGHLYIS 183 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 PKTV ++R + KL ++G ELT AIR GL Sbjct: 184 PKTVEAHRNHIQKKLGLNGTAELTKYAIRKGL 215 >UniRef50_B6JD38 Two component transcriptional regulator, LuxR family n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JD38_OLICO Length = 210 Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 125/209 (59%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 M +++ DDH + R G+R+IL + +VGEA+ G+D + R D+VL+D+SMPGI Sbjct: 1 MTRIIIADDHTIFREGLRQILAEANDFTLVGEATNGDDLLVRLREAPCDIVLLDLSMPGI 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+ R +II+L++H E+ + ++AGA GY++K +A ++++AIR V Sbjct: 61 SGITLVRAAREIAGAHRIIVLSMHEEHQYVVEALKAGADGYVTKNSASDQLIAAIRKVSQ 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+ ++++ +Q+ L ++ TE P L+ RE ++ M+ G K++ I+ L+LS KT Sbjct: 121 GELFVSAAASQEAILREMRTSPTELPHTRLTRREREVFDMLVAGHKISRIARDLDLSIKT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 V++++ + +K++ +L A+RH L Sbjct: 181 VSTHKTNLLAKMDAETTADLVRYALRHDL 209 >UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC6_SOLUE Length = 216 Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 72/213 (33%), Positives = 129/213 (60%), Gaps = 3/213 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +LL DDH +VR G+R +LE G +V+G+A+ G DAV + DVV+MD++MPG+ Sbjct: 4 IRILLADDHTVVRKGLRLLLESHPGFQVIGDAADGRDAVSLAGEHTPDVVVMDVAMPGLN 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA R+I+ I+ L++H++ K ++AGA YL K +A ++++A+ +V G Sbjct: 64 GIEAARQISAKLPHTAIVFLSMHSDESYVLKALKAGARAYLLKDSAEHDLIAAVIAVSEG 123 Query: 122 QRYIASDIAQQMA---LSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 + + + I++ + + Q++ + E + L+ RE +++ ++ +G+ E++ LNLS Sbjct: 124 KAFFSPAISKMLVEDYMRQMQERQIEDSYELLTTREREVLQLLAEGKNNKEVAAILNLSL 183 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 TV ++R + KLN+H EL AIR G+ + Sbjct: 184 YTVETHRGNILQKLNLHSGAELILYAIRKGVIS 216 >UniRef50_B9XL75 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XL75_9BACT Length = 234 Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 81/216 (37%), Positives = 130/216 (60%), Gaps = 5/216 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLL DDH +VR G+ L +++ I++VGEA G++ V R + ++VLMD+ MP + Sbjct: 19 IKVLLADDHPVVRKGLGSCLNNLEHIEIVGEAVDGQETVSKVRELSPEIVLMDLDMPTMS 78 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLEAT+ I R VK+++L++HT +++++GA GY+ K A E+V AI SV+ G Sbjct: 79 GLEATKIIRREFPLVKVLILSIHTNKDYVLQIIKSGAQGYVLKDAPLTELVRAIESVHGG 138 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFAS----LSERELQIMLMITKGQKVNEISEQLNLS 177 + + DI+Q M L Q E T + L+ RE +++ MI +GQ E++ ++ + Sbjct: 139 GAFFSPDISQIM-LDQYLAEATNGEESGNSKKLTNRETEVLSMIAEGQSNKEMASRMGVG 197 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 +TV ++R R+ +KL+IH LT AI HG+ E Sbjct: 198 VRTVETHRERVMNKLDIHNVAGLTKYAIAHGIIKLE 233 >UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y1Z3_LEPCP Length = 235 Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 130/210 (61%), Gaps = 1/210 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 +++L+VDDH +VR G++RILE VV EAS G A++ R +D+ ++D+SMPG+ Sbjct: 13 LHILIVDDHVIVREGLQRILEATGAGWVVAEASSGFQALEVMRHQPIDLAIVDLSMPGMN 72 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GL+ ++I V++++L++H E + +AGA GY++K A E+V+A+R V +G Sbjct: 73 GLDLIKRIRTEFPRVRVLVLSMHAEEQYAMRAFKAGANGYVTKDGASAELVNAVRKVATG 132 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Y+ + +A+++ L Q+ T A LS+REL+++ I G+++ +I+E L+LS KTV Sbjct: 133 GAYVTASLAERVVL-QLNGATTAPGHAQLSDRELEVLRRIVAGERITDIAEALHLSVKTV 191 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++++ R+ KL + L + HGL Sbjct: 192 STHKSRIQEKLQLPTMAALIRYGMAHGLAQ 221 >UniRef50_A6GLU5 Two-component response regulator n=1 Tax=Limnobacter sp. MED105 RepID=A6GLU5_9BURK Length = 218 Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 76/210 (36%), Positives = 123/210 (58%), Gaps = 2/210 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +LLVDDH +VRAG R +LE G K V EA ++A C+ +++ D+SMP Sbjct: 6 LRILLVDDHAVVRAGYRHLLETQGGFKQVREAENAQEAYSTCQKELPGLIICDISMPEPV 65 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GL +++ +VK +M T+H L M AGA GY++K + P+ ++ AI V +G Sbjct: 66 GLNLVQRVLGRWPEVKFLMFTMHNSIELARACMDAGAKGYVTKSSRPEVLLRAIGEVLAG 125 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + +I++D+++ MALS++ + LS RE +++ ++ GQ +I E L LS KT+ Sbjct: 126 RTFISADLSRLMALSRLRDNR--GGLDELSSREFEVLCLLVAGQSAEQIGELLFLSAKTI 183 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++ Y++ KL + D+ELT LAI GL N Sbjct: 184 HNIHYQIKKKLQVSNDIELTKLAIAWGLTN 213 >UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD Length = 217 Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 130/212 (61%), Gaps = 4/212 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + ++L DDH ++RAG++ +L ++V+GEAS GE+A+ D+VL+D++MP + Sbjct: 5 LRIVLADDHAVLRAGLKVLLNAEPDLEVIGEASDGEEAIDRVDDLHPDLVLLDLTMPKLN 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++ ++ + AD+KI++LT+H + V+Q GA GY+ K AA E++SAIR+V G Sbjct: 65 GVDCIEELLKKHADLKILVLTMHDDEEYLKAVLQVGAKGYVLKKAADVELLSAIRTVARG 124 Query: 122 QRYI----ASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 + +I A++ + +S EPEK LSEREL+++ + G +I++ L++S Sbjct: 125 EMFIYPTMAAEFVYRHLVSPREPEKESKKLKQLSERELEVLRNLALGHTNQDIADLLHVS 184 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 KTV +Y+ R+ KL +H EL A+ +G+ Sbjct: 185 VKTVETYKARVMEKLEMHKRAELVRYAMENGI 216 >UniRef50_B9XC41 Two component transcriptional regulator, LuxR family n=7 Tax=Verrucomicrobia RepID=B9XC41_9BACT Length = 267 Score = 142 bits (357), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 83/215 (38%), Positives = 128/215 (59%), Gaps = 5/215 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLL DDH +VR G+R +L K I++VGEA G +AV+ + DV+LMD++MP + Sbjct: 31 IRVLLADDHTVVRQGLRALLSGEKDIQIVGEAGTGREAVQMAQKLTPDVILMDIAMPLMN 90 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLEATRKIA K+++L+ + E+ K+ +AGA+GYL K AA ++V+A+R + G Sbjct: 91 GLEATRKIAEVAPSAKVLVLSSYGEDDYVQKLTEAGASGYLIKHAAANDLVAAVRETHKG 150 Query: 122 QRYIASDIAQ----QMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 + + IA+ Q+ T++ F L+EREL+ + I G+ I+ + +S Sbjct: 151 NAFFSPGIAKRLRDQVRAGFANGNGTKASF-ELTERELETLGHIVAGKPNKVIACDMGIS 209 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 KTV +R ++ +KLNIH LT AI G+ +A Sbjct: 210 IKTVEKHRQQVMNKLNIHEVASLTRYAIAKGMIDA 244 >UniRef50_C7QC31 Two component transcriptional regulator, LuxR family n=95 Tax=Actinobacteria (class) RepID=C7QC31_CATAD Length = 236 Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 79/216 (36%), Positives = 125/216 (57%), Gaps = 7/216 (3%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 V+L DD +LVRAG+R +++ G+ VVGEA+ G DAV+ R DVVLMD+ MPG+ G Sbjct: 15 RVVLADDQDLVRAGLRLMIDRAPGLAVVGEAATGHDAVRIAREARADVVLMDIRMPGLDG 74 Query: 63 LEATRKIA--RSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 L ATR+IA S A V++++LT + + +++GA+G+L KGA P ++ AIR+V Sbjct: 75 LAATRRIAADDSLAGVRVLILTTFEVDDYVFEALRSGASGFLGKGARPDALIDAIRTVAR 134 Query: 121 GQRYIASD-----IAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLN 175 G ++ IA+ ++L EP +L++RE ++ ++ G +I+ QL Sbjct: 135 GDALLSPSATRGLIARFLSLQDTEPVHPSPLLTTLTDRERELTALVADGMSNTDIARQLT 194 Query: 176 LSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 LSP TV ++ +KL +L LA + GL + Sbjct: 195 LSPLTVKTHVNHAMTKLGARDRAQLVVLAYQTGLAH 230 >UniRef50_B8GAC9 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexus RepID=B8GAC9_CHLAD Length = 213 Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 78/211 (36%), Positives = 125/211 (59%), Gaps = 2/211 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 M +LLVDDH ++RAG+R +LE + VVGEA A+ T D++L+D+S+ Sbjct: 1 MSGILLVDDHAVLRAGLRLLLESQPDMVVVGEAEDSRTAITQATTLQPDLILLDLSLTNS 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GL A + + + +I++LT+H + + + AGA GY+ K AA E+++AIR+V Sbjct: 61 SGLAAIQSLRAAAPQARILVLTMHDDEGYVRQALAAGAHGYVLKRAADAELIAAIRAVLR 120 Query: 121 GQRYIASDIAQQMALSQIEPE-KTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 G+ YI + +++ L I P+ + +P+ SLSERE ++++++ +G EI+ QLNLSPK Sbjct: 121 GELYIHPALTRRL-LEDILPQPQPTNPWESLSEREREVLVLVARGYTAAEIAGQLNLSPK 179 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 TV +YR R KL + L A+ H L Sbjct: 180 TVETYRTRGMEKLGLRSRAALVQFALDHNLL 210 >UniRef50_B8FX94 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FX94_DESHD Length = 212 Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 76/194 (39%), Positives = 116/194 (59%), Gaps = 1/194 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI V++ DDH L+R G+RRILE +GI+VV E G+ A+ RT D++LMD++MPG+ Sbjct: 1 MIRVVIADDHPLLREGLRRILEFEEGIQVVCEVGDGQGAINVSRTLDFDILLMDLNMPGV 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GLEA R I R + I++LTV + +V+Q G AGYL K P+ ++ +IR V+S Sbjct: 61 NGLEACRVIRRENETIGILVLTVDDSDEKVFQVLQLGVAGYLLKDVDPKTLIDSIRKVHS 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 GQ ++ + ++ + P + LS+RELQI+ + KG EI + L +S KT Sbjct: 121 GQPILSPAVTGKLLGQLVHPTQNRDT-CGLSDRELQILTYVVKGSSNREIGQALFISEKT 179 Query: 181 VNSYRYRMFSKLNI 194 V ++ +F KL + Sbjct: 180 VKNHLSSIFRKLAV 193 >UniRef50_Q39C19 Two component transcriptional regulator, LuxR family n=60 Tax=Betaproteobacteria RepID=Q39C19_BURS3 Length = 271 Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 72/210 (34%), Positives = 125/210 (59%), Gaps = 1/210 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 +N+LLVDDH +VR GIR++L D + V EA G DAV DV+L+D+S+P Sbjct: 3 LNILLVDDHAIVRQGIRQLLIDRGVARDVTEAENGGDAVAAVDKQEFDVILLDISLPDTN 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+E +++ R ++M +++ E+ + ++AGAAGYLSK +++ AI+ V +G Sbjct: 63 GIEVLKRLKRKLPRTPVLMFSMYREDQYAVRALKAGAAGYLSKTVNAAQMIGAIQQVAAG 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 ++Y++ +A+ +A + E P LS+RE Q + M+ G+++ +I+ L+LS KTV Sbjct: 123 RKYVSPAMAEALA-EYVSFENEPLPHEKLSDREYQTLCMLASGKRLTDIANTLSLSVKTV 181 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 + YR R+ K+ + + ELT + + L + Sbjct: 182 SVYRSRLLEKMRLSNNAELTFYVMSNRLVD 211 >UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y661_9BACT Length = 216 Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 79/212 (37%), Positives = 128/212 (60%), Gaps = 8/212 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLL DDHE+ G+R +L GI++ G A G +AV DV LMDM+MP + Sbjct: 3 IRVLLADDHEMFLEGLRELLGKADGIELAGLARDGAEAVAAAERLQPDVALMDMTMPRLN 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++AT+KIA + K+++L++H + L + ++AGA GY+ K + QE+ AI++V +G Sbjct: 63 GIQATQKIAAGSPGTKVLVLSMHGDKNLIVESLKAGARGYVLKECSSQELCLAIQTVANG 122 Query: 122 QRY-----IASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNL 176 Q Y +++ I + L++ E + ++ P LSEREL ++ ++ KG +I+EQL++ Sbjct: 123 QYYLTPAILSTLIGDYLRLTENEEQGSDCP---LSERELDVLKLLVKGCNAKQIAEQLSI 179 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHG 208 S TV+++R + KL + ELT AIR G Sbjct: 180 SKNTVDTHRRHILDKLGCNSMAELTRYAIREG 211 >UniRef50_Q0A525 Two component transcriptional regulator, LuxR family n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A525_ALHEH Length = 214 Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 75/211 (35%), Positives = 121/211 (57%), Gaps = 6/211 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +LLVDDH +VRAG RR+LE V EA GE A + C DVV+MD+S+PGI Sbjct: 10 LTLLLVDDHAVVRAGYRRLLEQASRCWQVTEADSGESAYRACARERFDVVVMDISLPGIS 69 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLE ++ R ++++++ ++H E + + GAAGY++K +AP+ +V A++ + +G Sbjct: 70 GLETLARLQRRAPEIRVLIFSMHEEPVFAEQALSGGAAGYITKSSAPEVLVEAVQRIAAG 129 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Y+ D+ + + + SLS RE +I ++ +G EI+ LN+S KTV Sbjct: 130 GHYLGPDVRCRHG------DADTAGLQSLSAREFEIFRLLAEGCGSAEIARLLNISYKTV 183 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 +Y + KL ++ E+T LAIR G+ A Sbjct: 184 ANYGSGIREKLALNNVAEMTRLAIRAGVIKA 214 >UniRef50_C1TL94 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL94_9BACT Length = 215 Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 75/213 (35%), Positives = 129/213 (60%), Gaps = 2/213 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +++ DDHEL G+R IL + V+ A G++A++ + DVV+MD++MP + Sbjct: 1 MIPLIIADDHELFLEGVRDILSREDDLDVLALARTGQEALELTLQHHPDVVVMDVTMPKM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EA+R+I S DVKI+ L++H + L A++++AGA+GY K + +E++ AI V S Sbjct: 61 NGIEASRRIKSSLGDVKILALSMHADKRLIAEILKAGASGYALKEGSSEELIRAIHIVSS 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFAS--LSERELQIMLMITKGQKVNEISEQLNLSP 178 G+ Y++ IA + ++ T P + LS+RE +++ ++ KG E++ L++S Sbjct: 121 GETYLSPKIASILIKDYLKLLDTAVPSRASLLSDREREVLALLAKGSSTKEVASSLHISK 180 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 TV+++R R+ KL+ EL AIR GL + Sbjct: 181 NTVDTHRRRIMEKLDCGNIAELIRFAIREGLID 213 >UniRef50_C7I0E4 Two component transcriptional regulator, LuxR family n=2 Tax=Thiomonas intermedia K12 RepID=C7I0E4_THIIN Length = 226 Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 71/210 (33%), Positives = 127/210 (60%), Gaps = 6/210 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGE--DAVKWCRTNAVDVVLMDMSMPG 59 + VL++DDH L+ + R L G + CG+ +A++ R + VVL+D+SMP Sbjct: 19 LRVLIIDDHALLGESLARFL----GSNDMQAVWCGDLVEAMQSIRDRSWSVVLLDLSMPR 74 Query: 60 IGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVY 119 GL+ ++I D+ +++L++H E + ++ GAAGYL+KG +P +V AI+ V Sbjct: 75 GNGLDLLKRIKLMHPDLPVLILSMHPEQQFALRALRGGAAGYLTKGCSPDVLVEAIQKVV 134 Query: 120 SGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 G RY+ +A+Q+A E E E P A LS+RE+Q+ + + +G+ VN+++++L++S K Sbjct: 135 HGGRYLTPGVAEQLANYMNEGEAAEEPHARLSDREMQVFMRLVEGKSVNQVADELHISCK 194 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 TV++++ R+ KL + D +L A+ G+ Sbjct: 195 TVSTHKTRLMHKLALDNDADLVRYAMHQGI 224 >UniRef50_C1A5E6 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5E6_GEMAT Length = 213 Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 79/212 (37%), Positives = 120/212 (56%), Gaps = 8/212 (3%) Query: 4 VLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGL 63 V+LVDDH LVR G+ +L VVGEA GE AV D+V++D++MPGI GL Sbjct: 7 VVLVDDHSLVRRGLAVLLRLDGRHDVVGEAGTGEAAVPLIEAERPDLVILDLNMPGIDGL 66 Query: 64 EATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQR 123 E R++ ++++L++H E L + + AGA GYL K + E+ AI SV GQR Sbjct: 67 ETLRRVRAKGLTTRVLVLSMHDETHLVGQALSAGADGYLLKDSMDDELFFAIESVLRGQR 126 Query: 124 YIASDIAQ-QMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVN 182 Y+A+ I + ++ S++ P SL+ RE +++ +I G + ++E LN+SP T Sbjct: 127 YLAAAIDRARLQESRMRP-------VSLTAREREVLQLIANGLTTSAVAEALNISPHTAT 179 Query: 183 SYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 +R + KLN+H VEL +A GL +T Sbjct: 180 RHRANLMQKLNVHNQVELVRIAASQGLIVLQT 211 >UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUT0_9FIRM Length = 216 Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 74/208 (35%), Positives = 126/208 (60%), Gaps = 3/208 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +LL DDH ++R G+ +L + VV EAS GE+A++ VD+ L+D+SMP +G Sbjct: 8 LRILLADDHRVLRKGLSLLLSSEEDFSVVAEASDGEEALEKAAKTPVDIALLDLSMPHMG 67 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLE R++ V++++LT+H+E + ++AGA GYL K E+ A+R+V +G Sbjct: 68 GLECLRRLKAMQPAVRVLILTMHSERQYVCECLRAGANGYLCKDTLDAELFRALRTVAAG 127 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 RY+ A+ + + E+ E P A+LS RE +++ +I G ++ I+++L LS KTV Sbjct: 128 GRYLGEREAELLIDGAL--EEPEEP-AALSTREREVLELIVHGYSLSTIADKLYLSIKTV 184 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 ++Y+ R+ KL+ + EL A+RH + Sbjct: 185 STYKTRLLQKLDCTQNSELVDYALRHNI 212 >UniRef50_C6BTX3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTX3_DESAD Length = 217 Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 80/213 (37%), Positives = 128/213 (60%), Gaps = 2/213 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 +I VLLVDDH++VR G+R L IKVVGEA+ G++AV+ + D++LMDM MP + Sbjct: 4 VIKVLLVDDHDIVRIGVRSFLGSFDDIKVVGEAANGQEAVEMTAELSPDIILMDMLMPVM 63 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G++A R+I +II LT + ++AGA GYL K + P E++ AIR V+ Sbjct: 64 DGIQAIREIRDRKLPGRIIALTSFATDDKLFPAIKAGAMGYLLKDSTPDELLEAIRRVHR 123 Query: 121 GQRYIASDIAQQMALSQIEP-EKTESPFAS-LSERELQIMLMITKGQKVNEISEQLNLSP 178 G+ +A DIA+++ +P E +E+P L+ REL + ++ KG+ I+E++ +S Sbjct: 124 GEPSLAPDIARKVLSELSQPGEDSETPTPDPLTPRELDTLKLVAKGKSNKAIAEEMFVSE 183 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 TV ++ + SKL++ VE T A+R G+ + Sbjct: 184 ATVRTHMTSILSKLHLANRVEATLYALREGIAS 216 >UniRef50_A2SCN0 Two-component response regulator n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SCN0_METPP Length = 210 Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 73/207 (35%), Positives = 129/207 (62%), Gaps = 2/207 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V+LVDDH +VR G +R+LE I VV EA G +A+ R VV++D+ +PG+G Sbjct: 3 IRVMLVDDHAIVREGYKRLLELQSDIVVVAEAGDGGEALNQWRALRPAVVVIDLGLPGMG 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLE ++ + +++ ++H + A+ ++AGA GY++K +AP ++V+A+R V G Sbjct: 63 GLELIARLRQRDEACRMLAFSMHRDAVWVAQALRAGALGYVTKSSAPSQLVAAVREVNQG 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 +R ++ D++ ++A + ++P+ +S LS RE ++M ++ G+ EI++ L+LS KTV Sbjct: 123 RRVLSPDVSGEVASALLDPQ--DSAAHGLSPREFEVMRLLVGGRTPQEIAQSLSLSVKTV 180 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHG 208 ++ Y++ SKL D EL +A + G Sbjct: 181 HNVHYQIKSKLGTASDFELARMAWQRG 207 >UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomycetales RepID=A4XCA4_SALTO Length = 235 Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 73/215 (33%), Positives = 126/215 (58%), Gaps = 4/215 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 +I VL+VDD LVR+ +R ++ ++ + + GEA GE+AV+ R DVVLMD+ MPG+ Sbjct: 2 IIEVLVVDDQPLVRSALRMVVAEVDDMVIAGEAETGEEAVRLTRELKPDVVLMDLRMPGM 61 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GG+EAT +I R + + ++++LT E+ +QAGAAG+L K + +++ A+R+V Sbjct: 62 GGIEATGQIVRLSPETRVLVLTTFDEDDHVFGALQAGAAGFLIKNMSLDDILDAVRTVAH 121 Query: 121 GQRYIASDIAQQMALSQIE----PEKTESPFASLSERELQIMLMITKGQKVNEISEQLNL 176 G +A + +++ ++ P P + ++ERE +++ ++ +G +EI+++L L Sbjct: 122 GNGLLAPSVTRRLIKHVVDTRTAPTVPRRPLSGITEREREVLTLVGRGLSNSEIADELRL 181 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 S TV +Y R+ SKL V L A GL Sbjct: 182 SHATVKTYITRLLSKLGARDRVHLVIAAYEAGLAT 216 >UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM Length = 216 Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 76/208 (36%), Positives = 122/208 (58%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+VDDH L+R+G+R +L + I+VVGEA+ G + + DVVL+D+SMP + Sbjct: 4 IKVLIVDDHTLMRSGLRLMLSAQEDIEVVGEAADGSGGIAMAQKMRPDVVLLDISMPEMS 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLE + + + D+++I+LT+H + + GA GY+ K AA + A+R+VYSG Sbjct: 64 GLECLKTLLANQPDLRVILLTMHEDARYVKEGFALGAMGYVLKKAADDVLYQAVRAVYSG 123 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + YI I + + E + + LS++E +++ +I G EI+EQL +S KTV Sbjct: 124 EMYIQPSITKAVVAELTERPRADDLRKPLSDQEKKVLSLIAAGYANREIAEQLVISVKTV 183 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 +Y+YR+ KLN +L A+ +GL Sbjct: 184 ETYKYRIMEKLNCKKRSDLVKFALDNGL 211 >UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VH7_CYTH3 Length = 220 Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 76/212 (35%), Positives = 128/212 (60%), Gaps = 8/212 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 IN+LLVDDH +VR GI+ L+D K +VGEA+ G D ++ + DVV+MD++MP + Sbjct: 4 INILLVDDHTIVRDGIKATLKDQKNFHIVGEAANGLDGIEAVKQLKPDVVIMDITMPEMS 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA I++ D K+++L++H K ++AGA GYL K E + AI +VY+G Sbjct: 64 GIEAADVISKKYPDSKVLILSMHDNETYILKSVEAGAYGYLLKDVDKDEFIKAITAVYNG 123 Query: 122 QRYIASDIAQQMA---LSQI-EPEKTESPFAS----LSERELQIMLMITKGQKVNEISEQ 173 +Y + I+ + LS++ + + +S +++ L++RE I+ MIT G+ EI++ Sbjct: 124 DKYFNTAISSVLVSGYLSKVKQTDSIQSGYSNDEYELTKREKGILKMITDGKNNREIADG 183 Query: 174 LNLSPKTVNSYRYRMFSKLNIHGDVELTHLAI 205 L +S +T+ ++R + KL + VEL +AI Sbjct: 184 LGISIRTIETHRANIMKKLKVKNAVELVRIAI 215 >UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NY27_AZOSE Length = 215 Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 124/212 (58%), Gaps = 4/212 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I ++L DDH++ R +R +LE GI++VGEAS G++ + VD+ +D+ MPG+ Sbjct: 3 IRIVLADDHQMFRHALRAMLEKEPGIRIVGEASNGDELIDLISHQPVDIACVDIGMPGMN 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR++ V++I L+ ++ ++ AGA GY++K A +E++ AI +V Sbjct: 63 GIEATRRLLAIRPHVRVIGLSAFSDRQFVLDLLNAGATGYVTKAEAGEELLRAIHTVQQS 122 Query: 122 QRYIASDIAQQM--ALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 + Y+ D+A + AL P+ +P ++ RE Q++ +I +G I+++L+L+P Sbjct: 123 KTYLCPDVAATVTNALLDNAPKDISAP--RITARERQVLQLIAEGYTSTRIADRLHLAPS 180 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 TV +R + KL++H ELT AIR G+ Sbjct: 181 TVEVHRRNIMRKLDLHSVAELTKYAIRSGITT 212 >UniRef50_A5FQU5 Two component transcriptional regulator, LuxR family n=1 Tax=Dehalococcoides sp. BAV1 RepID=A5FQU5_DEHSB Length = 209 Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 72/204 (35%), Positives = 120/204 (58%), Gaps = 2/204 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 M N+L+VDDH +VRAG++ IL +G+ + EA ++ N D++L+D+++P Sbjct: 1 MYNILIVDDHPIVRAGVKTILNAERGMFTLDEAQNAKETKLKISANNYDLILLDLTLPDS 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GL + I I++L+VH E + ++AGA+G++SK +AP E++ AIR V + Sbjct: 61 QGLNLLKDIKTIKKHTPILVLSVHPEEQYGIRCIKAGASGFISKESAPFELIKAIRKVQA 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G RYI+ +A+ MA +K LS+RE I + I +G +V E++E+ LSPKT Sbjct: 121 GGRYISPALAEIMACQIF--DKDGPRHLCLSDREFDIFIGIAQGLRVTELAERFKLSPKT 178 Query: 181 VNSYRYRMFSKLNIHGDVELTHLA 204 + +YR + +K+ + +VEL A Sbjct: 179 IYTYREHVLTKMGLSSNVELARYA 202 >UniRef50_B0TSG4 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=B0TSG4_SHEHH Length = 222 Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 125/206 (60%), Gaps = 1/206 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I ++LVDDH LVRAGIR +LE I ++V+ E+ G +A+ RT+ ++++D+S+PG+ Sbjct: 5 ITIILVDDHILVRAGIRSLLESIANVEVIKESGDGIEALSLLRTHQPTLLILDISLPGLN 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLE R + + KI+ML++H++ AK + G+ GYL K +A +E+ +AI ++ + Sbjct: 65 GLEVARSVTKMKTKTKILMLSMHSDVEYVAKALTIGSHGYLMKESAVEELETAISTLIND 124 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFAS-LSERELQIMLMITKGQKVNEISEQLNLSPKT 180 ++YI +I +M ES L+ R+ QI+ +I +G EI+E++++S KT Sbjct: 125 KQYIGKNIDLEMVDKLRGDSNQESDLIKLLTSRQRQILQLIAEGYSTREIAERMSVSIKT 184 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIR 206 V ++R + S+LNI L AIR Sbjct: 185 VETHRAHIMSRLNIFDIAGLVRFAIR 210 >UniRef50_C1DSJ1 Two-component response regulator, LuxR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DSJ1_AZOVD Length = 211 Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 75/211 (35%), Positives = 125/211 (59%), Gaps = 3/211 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI+VL+VDDH+L R+G+ R+L + + I V GEA+ A++ R V ++D+++ G Sbjct: 1 MISVLIVDDHQLFRSGLSRLLSEDRKIAVEGEAASLPQAMEILRRQTFHVAIVDINLAGR 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GLE +I + ++M++++ A Q GA+GYLSK P E++ A+++V Sbjct: 61 SGLELLSRIRHDWPRLPVLMISMYPAAQFSAVAFQKGASGYLSKDVEPGELLRAVKTVAK 120 Query: 121 GQRYIASDIAQQMALSQIEPEK-TESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 G +Y AS + A Q+ E+ P L++RE+QI +I G ++ EI E++ LS K Sbjct: 121 GGQYDASHPSATPA--QVADERFANQPHLRLTDREMQIFNLIVTGARLTEIGERILLSVK 178 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 TV++Y+ R+ KL ++ + EL AIRHG+ Sbjct: 179 TVSTYKTRIMEKLGVNNNAELIQYAIRHGIL 209 >UniRef50_Q0EZ33 Regulatory protein, LuxR:Response regulator receiver n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZ33_9PROT Length = 217 Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 76/211 (36%), Positives = 127/211 (60%), Gaps = 1/211 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V LVDDHE+VR G R +LE ++VV E++ G+ A + D+V+MD+S+P I Sbjct: 7 ITVQLVDDHEVVRIGFRYLLEADDLMQVVAESASGKQACRDYEKWLPDIVIMDISLPDIS 66 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLE R+I + + +I+ML++H+ + + MQ GA G++ K + + ++SAI V +G Sbjct: 67 GLEVMRRILLAHPEARILMLSMHS-GMVAERAMQMGARGFVCKRSGARLLISAIHEVMAG 125 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 +RY+ + Q+ L E + +SL+ REL++ L++T G+ V++I+ L+LS KTV Sbjct: 126 RRYLDDETGVQLPLLHSASETLKPLPSSLTRRELEVCLLLTDGRSVSDIAAALHLSEKTV 185 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 S+R + KL + EL +A R G+ + Sbjct: 186 YSHRQHIMEKLGVATMAELVQVATRMGILSG 216 >UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus RepID=A0R9S0_BACAH Length = 216 Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 76/212 (35%), Positives = 124/212 (58%), Gaps = 6/212 (2%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGE---DAVKWCRTNAVDVVLMDMSM 57 MI +L+VDDH +R IR ILED + VVGEAS G+ + V+ CR D +LMD+++ Sbjct: 4 MIKILVVDDHAFLRDAIRSILEDESDMNVVGEASSGDGVLEKVEACRP---DCILMDINL 60 Query: 58 PGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRS 117 PG G+EAT + ++ + ++++ T++ + +QAGA GYL K ++ ++VV+AIR Sbjct: 61 PGKNGIEATELVKKNYPNCRVLVFTMYEHDEYLMDALQAGADGYLLKDSSSEQVVAAIRM 120 Query: 118 VYSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 +Y G I + +++ + K ES L+ERE +I+ + KG EI+E L +S Sbjct: 121 LYRGDSVIHPRMTKKLITYHQQKMKVESNENELTEREKEILFELVKGLSNKEIAEALYIS 180 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 KTV + ++F KLN+ + A+R+ L Sbjct: 181 DKTVKIHINKIFKKLNVKSRSQAVIYAVRNQL 212 >UniRef50_A1K2Y1 DNA-binding response regulator n=7 Tax=Betaproteobacteria RepID=A1K2Y1_AZOSB Length = 211 Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 77/209 (36%), Positives = 129/209 (61%), Gaps = 1/209 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 M+++ +VDDH +VRAG R +L + +V EA+ GEDA+ D++L+D+S+PG Sbjct: 1 MLHLAIVDDHAIVRAGFREMLATETDLHIVFEAATGEDALARVADTGCDLLLLDLSLPGQ 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G++ R + R ++++LT E+ +++ GA GYL K E+V AIR++ Sbjct: 61 SGVDVLRTLRRRGDSTRVLVLTGFPEDRYAVAMIRLGADGYLCKNCERDELVQAIRTIAQ 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+RY+++ A+ +A +I + + + LSERELQ+ L + G+ V+ I++ L+LS KT Sbjct: 121 GRRYLSARTAELLA-GEIAGDGSGAAHEQLSERELQVFLRLAHGESVSAIADALHLSIKT 179 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 V++YR R+ KL++ + EL AIRHGL Sbjct: 180 VSTYRSRVLEKLDVTSNAELATYAIRHGL 208 >UniRef50_A7HA46 Two component transcriptional regulator, LuxR family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HA46_ANADF Length = 212 Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 76/210 (36%), Positives = 124/210 (59%), Gaps = 4/210 (1%) Query: 5 LLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGLE 64 ++ DDHE+VR G+R ++E G V GEAS G +AV+ + DVV++D++MP + GLE Sbjct: 1 MVADDHEVVRRGVRALVESHPGWTVCGEASNGREAVRLAQELRPDVVVLDVTMPELNGLE 60 Query: 65 ATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQRY 124 ATR+I S D +II+LTVH + L + + AGA GY+ K A + +V AI ++ Y Sbjct: 61 ATREIRASVPDTEIILLTVHDSDQLLGQALDAGARGYVLKEDAARHLVDAIDALSKHAPY 120 Query: 125 IASDIAQQMALSQIEPEKT----ESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 + S A++ + + T SL++RE +++ ++ +G E++ QL++S KT Sbjct: 121 VPSRAAERPGNAAAQERNTVVSRGGRVTSLTQREREVLRLLAQGDSNREVAGQLSISAKT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 V ++R + KL V+L H AIR+G+ Sbjct: 181 VETHRANVMRKLGASSIVDLVHYAIRNGIV 210 >UniRef50_A2SLK8 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiales RepID=A2SLK8_METPP Length = 226 Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 81/223 (36%), Positives = 125/223 (56%), Gaps = 14/223 (6%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAV-----DVVLMDM 55 MI V++ DDH +VR GI++IL D I + GEA G DA+ R A DVVL+D+ Sbjct: 1 MIRVVICDDHVIVRQGIKQILADAGDIALAGEAGNGPDAMTLVRAGAAAGTPPDVVLLDI 60 Query: 56 SMPGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAI 115 +MP GL+ + + + ++ML+ + + + ++ GAAGYL+K A ++++ AI Sbjct: 61 AMPQRDGLDVLKSLKAEFPRLPVLMLSTYPDRQYAVRSLKLGAAGYLNKSADSEQMIDAI 120 Query: 116 RSVYSGQRYIASDIAQQMA---LSQIEPEK-----TESPF-ASLSERELQIMLMITKGQK 166 R V G+ +I +A+Q+A + I K E+P LS RE Q+ ++ G+ Sbjct: 121 RRVAQGKLFITPSVAEQLAGAVGAGIGSRKGGVGDDEAPLHERLSHREYQVFGLLAAGKS 180 Query: 167 VNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 V EI+EQL LS TV++YR R+ K + DVEL A+R L Sbjct: 181 VGEIAEQLVLSSNTVSTYRARILEKTGVRNDVELALYAVRQEL 223 >UniRef50_D2Q2Q8 Two component transcriptional regulator, LuxR family n=3 Tax=Actinomycetales RepID=D2Q2Q8_9ACTO Length = 216 Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 82/216 (37%), Positives = 124/216 (57%), Gaps = 5/216 (2%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VL+VDD +LVRAG+R ++++ ++VVGEAS G +A+ R + DVVLMD+ MP + Sbjct: 1 MIRVLVVDDQDLVRAGLRLLIDNTDDLRVVGEASDGREALALAREHQPDVVLMDLQMPVM 60 Query: 61 GGLEATRKIARST--ADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSV 118 GG+E T I D +++LT + +QAGA+GYL K A E+ AIR+ Sbjct: 61 GGVETTAAIRADPLLKDTPVVVLTTFDHDADVVDAVQAGASGYLLKDLAADELRGAIRTA 120 Query: 119 YSGQRYIASDIAQQMA--LSQIEPEKT-ESPFASLSERELQIMLMITKGQKVNEISEQLN 175 +G IA +A+ M +S++ K E A L+ REL I+ + +G EI + L Sbjct: 121 VTGGAPIAPKVAKLMMHRISRMPSRKVQEETLAGLTARELDILAHVGRGLSNEEIGQALF 180 Query: 176 LSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 LSP+T +Y R+ +KL + +L LA + GL + Sbjct: 181 LSPETARTYVSRLLAKLGVRDRSQLVVLAHKAGLVD 216 >UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteroidetes RepID=A5FAZ3_FLAJ1 Length = 219 Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 72/216 (33%), Positives = 127/216 (58%), Gaps = 6/216 (2%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 +I V+L DDH VR GI+ +LE+ I+VVGEA G DA++ D++++D+ MP + Sbjct: 4 IIRVVLADDHVFVRDGIKSLLENEANIEVVGEAIDGADALEVVTATKPDLLIVDIRMPNL 63 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+E K+ +VKIIML++H K ++AGA GYL KG++ +E + A+ +V S Sbjct: 64 TGIEVVEKLRSENNNVKIIMLSMHESEEYVLKSIKAGADGYLLKGSSKEEFLKALHAVSS 123 Query: 121 GQRYIASDIAQQM------ALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQL 174 G +Y + DI+ + + + +EP++T +++RE +I+ ++ G+ EI+E L Sbjct: 124 GGKYFSGDISSILISQLTNSTASLEPKQTLGEEMMITKREKEILTLLLSGKGNKEIAEAL 183 Query: 175 NLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 +S +T +R+ + KL + +EL++ A + L Sbjct: 184 EISKRTAEVHRFNLMKKLKVKNLMELSNKAAEYSLI 219 >UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR family n=3 Tax=Clostridia RepID=Q2RJU9_MOOTA Length = 222 Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 72/215 (33%), Positives = 132/215 (61%), Gaps = 4/215 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +L+ DDH LVR GIR+ILE ++VVGEA+ G++A++ R V++MD++MPG+ Sbjct: 7 ITILIADDHSLVREGIRKILELEPDLQVVGEAATGQEAIEMTRRYQPQVIIMDINMPGLN 66 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EAT+ I + + I+ LT+H + +++++G +GY+ K + +E+V A+ V G Sbjct: 67 GIEATKVIRQEWPQIAILALTIHDDEEYIIELLRSGVSGYVLKDISAEELVQAVYQVARG 126 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFA---SLSERELQIMLMITKGQKVNEISEQLNLSP 178 R I +AQ++ + I+ +K +P L+ RE +I++ ++ G+ EI+ +L +S Sbjct: 127 ARVIHPGVAQKV-IGCIQKQKPFTPAPVSIPLTAREREILIHVSLGKSNREIARELFISE 185 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 KTV ++ +F K+ + + A++HGL +A+ Sbjct: 186 KTVKNHLTHIFHKIGVSDRTQAALYALKHGLNDAK 220 >UniRef50_A1ASJ5 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfuromonadales RepID=A1ASJ5_PELPD Length = 208 Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 76/209 (36%), Positives = 121/209 (57%), Gaps = 6/209 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +L+ DDH +VR G+ ILE G+ V GEA G DA+ DVV+MD++MP + Sbjct: 3 VRILIADDHAIVREGLTMILES-SGMIVAGEARDGRDALSQTEVLRPDVVVMDIAMPELN 61 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++ATR I +VK+I+L++H + MQAGA YL K +A +V A+R+V G Sbjct: 62 GIDATRMIHGRLPEVKVIVLSMHNTREHVFRAMQAGARAYLLKESAGSGLVDAVRAVIRG 121 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + Y + A++ +SP SLS RE +++ ++ +G+ EI+E L+LSPK++ Sbjct: 122 ECYFGEGVDAPQAVAGF-----KSPLDSLSLREREVIQLVVEGRTSAEIAELLSLSPKSI 176 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 +YR R+ KL + L A++HG+ Sbjct: 177 ETYRSRLMVKLGVGNIPALVKFALQHGIT 205 >UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Tax=Firmicutes RepID=LIAR_BACSU Length = 211 Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 128/212 (60%), Gaps = 2/212 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VLL+DDHE+VR G+ LE I+V+GEAS G + V+ + DV+LMD+ M G+ Sbjct: 1 MIRVLLIDDHEMVRMGLAAFLEAQPDIEVIGEASDGSEGVRLAVELSPDVILMDLVMEGM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EAT++I R +D KII+LT ++ V++AGA YL K + E+ AIR+ Sbjct: 61 DGIEATKQICRELSDPKIIVLTSFIDDDKVYPVIEAGALSYLLKTSKAAEIADAIRAASK 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTES-PFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 G+ + S +A ++ LS++ + P SL++REL+I+ +I +G+ EI E+L ++ K Sbjct: 121 GEPKLESKVAGKV-LSRLRHSGENALPHESLTKRELEILCLIAEGKTNKEIGEELFITIK 179 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 TV ++ + SKL++ + A R+ L N Sbjct: 180 TVKTHITNILSKLDVSDRTQAAVYAHRNHLVN 211 >UniRef50_Q39TN7 Two component transcriptional regulator, LuxR family n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39TN7_GEOMG Length = 210 Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 125/207 (60%), Gaps = 1/207 (0%) Query: 4 VLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGL 63 +L+ DDH + R G+++++ + VV EA G++ + + N D+V++D++MPG GL Sbjct: 5 ILVADDHAIFREGLKQVIGTTVDMSVVDEAVDGKELLNKIQANDYDMVILDITMPGRNGL 64 Query: 64 EATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQR 123 + ++ + ++++++H E + ++GAAGYL+KG+A E++ A+ + G++ Sbjct: 65 DVLTEMKSIKPKLPVLVMSMHPEEQYALRAYKSGAAGYLNKGSASNELLDALHKISMGKK 124 Query: 124 YIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVNS 183 Y++S +A+ + +S + + SLS RE Q+M MI G+ V +I+ +L+LS KTV++ Sbjct: 125 YVSSALAESL-VSGLSDHNQQDLLQSLSNREYQVMSMIASGKTVGKIATELSLSVKTVST 183 Query: 184 YRYRMFSKLNIHGDVELTHLAIRHGLC 210 YR + KLN+ + ELT I + L Sbjct: 184 YRAHILRKLNMKNNAELTRFVIENKLI 210 >UniRef50_C6CGT1 Two component transcriptional regulator, LuxR family n=21 Tax=Proteobacteria RepID=C6CGT1_DICZE Length = 213 Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 70/209 (33%), Positives = 126/209 (60%), Gaps = 1/209 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 +I +++ DDH ++R G+++I + ++VV EA G + R N VD++L+DMSMPGI Sbjct: 4 LIKLMIADDHVIMREGLKQIFALDENLEVVAEAGTGSQVLSQLRENQVDLLLLDMSMPGI 63 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G E +I + I++L++++E + +V+++GA GY++K P+ ++SAIR V Sbjct: 64 CGEELIIRIVAQYPRLPILVLSMYSEPQIARRVLKSGALGYITKDKDPEALLSAIRRVAQ 123 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G RYI IA+Q+ + + + + L+ RE QIM+M+ +G VN I+E L +S KT Sbjct: 124 GARYIDHSIAEQIVFADCQT-RGDGRHELLTSREHQIMVMLAQGLGVNAIAEMLAISNKT 182 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 V++++ R+ K+ + ++ A+ L Sbjct: 183 VSTHKSRLMEKMQFTTNADIVKYALSQRL 211 >UniRef50_Q13QW9 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderia RepID=Q13QW9_BURXL Length = 220 Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 76/209 (36%), Positives = 122/209 (58%), Gaps = 4/209 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAV-KWCRTNAVDVVLMDMSMPGI 60 I+VLLVDDH +VR G RR+LE + V GEA+ A ++C DVV+MD+S+PG Sbjct: 6 ISVLLVDDHAVVREGYRRLLELNADVHVCGEAADAAQAYQRFCALRP-DVVVMDVSLPGA 64 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EA R++ D ++++ +VH E + + AGA GY++K +AP +V A+R++ Sbjct: 65 SGIEAMRRMLAREPDARVLIFSVHEEAIFVRRALDAGALGYVTKASAPDVLVEAVRTIAR 124 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 Y++ DI+Q +AL E P LS RE +++ ++ +G + I+E+L LS KT Sbjct: 125 RAGYLSPDISQALALRNAFSEGP--PGRQLSAREFEVLRLLVQGYTLPSIAEKLGLSQKT 182 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 V +++ + K V+L +A R GL Sbjct: 183 VANHQSVIRQKFGADNGVQLAQMASRLGL 211 >UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria RepID=Q2LSF1_SYNAS Length = 217 Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 74/215 (34%), Positives = 124/215 (57%), Gaps = 2/215 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 +NVLL DDH++VR G+R +LE + VV EA G+ + R ++++MD+SMP + Sbjct: 3 VNVLLADDHKIVRDGLRTLLETHGSMNVVAEAENGQKTITLARELHPEIIIMDISMPDMN 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++ATRKI +K+I L++H + +++AGA+GYL K A +E+V+AI++V S Sbjct: 63 GIDATRKITSDLPGIKVIALSMHADRHFVIGMLEAGASGYLLKDCAFEELVNAIQTVLSN 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFAS--LSERELQIMLMITKGQKVNEISEQLNLSPK 179 Y++ IA + + + S S L+ RE +++ ++ +G +I+ L++S K Sbjct: 123 HTYLSPTIADIVVKNYVHKAAGTSVVVSSELTPRERELLQLLAEGLSAKQIAANLHVSVK 182 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 TV ++R + KL + EL AIR GL T Sbjct: 183 TVETHRRNITQKLGVGSVAELIKYAIREGLTTVGT 217 >UniRef50_A8UE45 Two component transcriptional regulator, LuxR family protein n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UE45_9FLAO Length = 209 Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 63/210 (30%), Positives = 122/210 (58%), Gaps = 1/210 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +L+VD H +VR G+ L KV+G S G + ++ R N VDV++ ++ +P + Sbjct: 1 MIRILIVDSHPIVRTGLELFLNSKPDFKVIGNLSSGIEIFEFVRRNQVDVIISEVDLPEL 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+ A R I + + ++M + E ++AGA+GYL+K A + + +A+R ++S Sbjct: 61 NGITALRAIKKENKSINVLMFSHQPEEIYAISTLKAGASGYLNKTANVETIEAAVRKIHS 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+ ++ + + + ++ F LS RE++++ +++ G+K EI+++L+++ KT Sbjct: 121 GEVSLSEKMDKHLRYEDTRKSRSRM-FKKLSTREVEVLKLLSIGRKNKEIAQELDINEKT 179 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 V++Y+ R+F KLN+ ++L H A H L Sbjct: 180 VSTYKARLFKKLNVTNIIDLIHQAKHHNLT 209 >UniRef50_C1A5H1 Putative NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5H1_GEMAT Length = 231 Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 79/224 (35%), Positives = 127/224 (56%), Gaps = 13/224 (5%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 +I V+LV DH++VRAG++ +L K I VVGE G+DA+ V++MD+SMP + Sbjct: 5 LIRVILVADHQIVRAGLKAVLSTAKDITVVGEGGNGKDALALAERLDPHVIVMDLSMPDM 64 Query: 61 GGLEATRKI----------ARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQE 110 GL ATR++ A A ++++LT+HTE+ +++AGA GYL K A +E Sbjct: 65 DGLTATRELQKVNAGRVHPADEPATRRVLVLTMHTEDEHLVALLEAGAGGYLLKSVADRE 124 Query: 111 VVSAIRSVYSGQRYIASDIAQQMALSQIEPE---KTESPFASLSERELQIMLMITKGQKV 167 +V AIR+V +G Y+ A+ +A + E + F L++RE ++ M+ +G Sbjct: 125 LVDAIRTVAAGDVYVQPSAARALARGLAKREGHADERARFEKLTDREQVVLKMVAEGYTA 184 Query: 168 NEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 EI E L +SPKTV++Y+ R+ KL + + A++ GL Sbjct: 185 PEIGEHLTISPKTVDTYKQRIGEKLGLTHRTDYVKFALKLGLLK 228 >UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M4_MAGSA Length = 209 Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 73/208 (35%), Positives = 128/208 (61%), Gaps = 3/208 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +L+ +D +LVR G+ +L + + +VGEA G+ A++ RT A DVVLMD+SMP + Sbjct: 3 VRILIAEDQQLVRQGLVALLA-VDDVTIVGEAEDGKGAIEMARTLAPDVVLMDLSMPELD 61 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR+I + V++++LTV A+ + AGA GY K E+++AI +V +G Sbjct: 62 GVEATRRIKQVAPQVRVLVLTVANCERRVAEALAAGADGYALKKLGHGELMAAINAVCAG 121 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + Y+ +++ + +E ++ SL+ RE +++ +I +G K EI+++L ++ KTV Sbjct: 122 KTYLGPGLSEDLVKEYLEG--SDMGGGSLTAREREVLQLIARGHKNREIADELGIAIKTV 179 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 ++R ++ KL++H EL AIR GL Sbjct: 180 ETHRTKIMQKLDLHNSAELAAYAIRRGL 207 >UniRef50_D1BTX1 Two component transcriptional regulator, LuxR family n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=D1BTX1_XYLCX Length = 220 Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 73/214 (34%), Positives = 126/214 (58%), Gaps = 6/214 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLL DD +R+ R++L+ +G VV E G +AV+ R DV L+D+ MPG+ Sbjct: 6 IRVLLADDDARLRSVYRKLLDRTEGFVVVAETGDGAEAVRLARERTPDVALLDVQMPGLS 65 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GL+A R I + V+++MLT + + AG +G+L K A P EV++A+RSV++G Sbjct: 66 GLDAARAIL-AGGQVRVVMLTTFDLDEYVHDALTAGVSGFLLKNATPAEVLAAVRSVHAG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFAS----LSERELQIMLMITKGQKVNEISEQLNLS 177 +A ++ ++ + + P + + P LS+RE+ ++ ++ G+ +I+++L LS Sbjct: 125 HALLAPEVTGRL-IRHLAPPRPDHPHPFVGKVLSQREVDVVRLVALGRSNQQIADELVLS 183 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 +TV +Y RMF+KL+++ +L LA R GL + Sbjct: 184 LETVRTYLRRMFAKLDVNDRTQLAVLAYRAGLLH 217 >UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales RepID=D2BDI1_STRRD Length = 227 Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 76/209 (36%), Positives = 124/209 (59%), Gaps = 3/209 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLLVDDH L+R G+R +LE + G +VVGEA GE+A+ + DVV+MD+ MPG+ Sbjct: 19 IRVLLVDDHPLLRHGLRALLEQVGGAEVVGEAGDGEEAIALVLSLNPDVVVMDLVMPGVT 78 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR + D+ +++LT+ ++ ++AGA GY+ KGA + ++A+R+V G Sbjct: 79 GIEATRTLIDRRPDLGVLVLTMSEDDASVFAALRAGARGYVLKGADGNDFIAAVRAVARG 138 Query: 122 QRYIASDIAQQM-ALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 + +A+++ PE PF L++RE +I+ ++ G+ EI+ +L LS KT Sbjct: 139 EAVYGPAVARRIRRFLTTGPES--GPFPELTQREREILDLLASGKSNAEIARRLFLSQKT 196 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 V ++ +F+KL + + A R GL Sbjct: 197 VKNHLTSIFAKLQVADRTQAVVRARRAGL 225 >UniRef50_Q21Y82 Two component transcriptional regulator, LuxR family n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21Y82_RHOFD Length = 230 Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 76/213 (35%), Positives = 133/213 (62%), Gaps = 3/213 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 M V LVDDH+++R G+R +LE KG KVVGE++ +A+ +V+L+D+++ Sbjct: 1 MTGVYLVDDHQIMREGLRALLE-AKGHKVVGESADPTEALADLLRMRPEVLLLDLNLGER 59 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G E ++ R + ++LT+ + A+ ++ GA+GY+ KG+A +++SA+ + Sbjct: 60 SGFELLAELQRRHLPTRCVVLTMSAQPRQVAEALRMGASGYVLKGSAVSDLLSAVDAAVR 119 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G++++ +++A +AL Q+ K E P ++LS RE QI++M+ KG ++I QL+LSPKT Sbjct: 120 GKKHLGAEVAD-LAL-QVFTLKDEDPLSTLSPREQQIIIMVVKGASSSQIGTQLHLSPKT 177 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 V +YR R+ +KL + L LA+RH L +A+ Sbjct: 178 VATYRSRLMAKLGVRDVPGLVRLAVRHKLIDAD 210 >UniRef50_D1NYD9 Response regulator UvrY n=4 Tax=Providencia RepID=D1NYD9_9ENTR Length = 198 Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 69/177 (38%), Positives = 102/177 (57%) Query: 37 EDAVKWCRTNAVDVVLMDMSMPGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQA 96 + + W R N +++L+ G L+ I R+ DV II+ + + + Sbjct: 7 DQVITWNRQNRANIILISSEHCHFGSLKTLATIRRTQPDVGIIIYNIRNNYSFVLRALDI 66 Query: 97 GAAGYLSKGAAPQEVVSAIRSVYSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQ 156 G G LS E++ +I+ V + Q+ I+ DIAQ +AL ++ LS REL+ Sbjct: 67 GIFGILSANINEDELIESIQIVNARQKIISPDIAQHIALQRVNQRNQLDIHELLSARELE 126 Query: 157 IMLMITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 IMLMITKG V +++++L+LSPKTVN+YRYRMF KLNI DVELTH+AI + L A+ Sbjct: 127 IMLMITKGVPVKQVADRLSLSPKTVNTYRYRMFGKLNICSDVELTHIAISYDLITAK 183 >UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVU6_9BACT Length = 216 Score = 132 bits (333), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 118/212 (55%), Gaps = 1/212 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 + ++LVDDH L R+G+R +L+ GI+VVGEAS GE+ + DVV MD +MPG+ Sbjct: 3 LCRIILVDDHSLFRSGMRGLLDRYDGIRVVGEASTGEEFLAMLPATEADVVFMDFAMPGM 62 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G E T K +K+I L++ + ++++QAGA G+L K + EV+ AI +V + Sbjct: 63 NGAETTEKALALEPGLKVITLSMFGDENYYSRMVQAGAKGFLMKDSPMDEVLRAIETVAA 122 Query: 121 GQRYIASDIAQQMALS-QIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 G Y ++ + +A Q E LS RE++I++ + +G EI+++L +S + Sbjct: 123 GGTYFCEEVLRSLASRMQTAVSGYEGSDERLSTREIEILVCVCRGLSNQEIADELFISKR 182 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 TV+ +R + K L A+RHGL + Sbjct: 183 TVDKHRANILEKTGCKNTASLVVYAVRHGLVD 214 >UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillaceae RepID=A0RDP4_BACAH Length = 221 Score = 132 bits (333), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 71/207 (34%), Positives = 124/207 (59%), Gaps = 2/207 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +LLV+DH +VR G+ L+ + ++VGEA GEDA+ + RT DVVLMD+SMP + Sbjct: 15 IKLLLVEDHHIVRRGLVFFLKTREEFEIVGEAENGEDALTFVRTERPDVVLMDLSMPKMD 74 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EAT++I + +KI++L+ +E ++AGA GY K P+++V++I ++Y G Sbjct: 75 GIEATKQIKQYDETIKILILSSFSEQDYVLPALEAGADGYQLKEVQPEQLVASIIAIYEG 134 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + AL K E+PF+ L++RE +++ I KG+ EI+ +L+++ +TV Sbjct: 135 NANFHPKVTP--ALLGRSAVKKENPFSMLTKREQEVLQEIAKGRSNKEIAAELHITEQTV 192 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHG 208 ++ + +KL + + A++HG Sbjct: 193 KTHVSNILAKLEVDDRTQAALYAVKHG 219 >UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NIZ3_ROSCS Length = 230 Score = 132 bits (332), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 75/211 (35%), Positives = 120/211 (56%), Gaps = 2/211 (0%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 VL+VDDHEL RAG+ +L GI+VVGEA G A+ + + VD+V+MD+ MP I G Sbjct: 15 RVLIVDDHELARAGLAAVLACEPGIEVVGEADNGAAALDFVARHPVDLVMMDLQMPVIDG 74 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 +EATR+I + IIM+TV + + ++AG AGYL K A+ +E++ A+R V G+ Sbjct: 75 IEATRRIKALHPAIGIIMVTVQAKPDALMEALRAGVAGYLLKDASRREIIGAVRQVLRGE 134 Query: 123 RYIASDIAQQMA--LSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 ++ D+ Q L+ P +P L+ RE Q++ ++ +G+ EI+ +L +SP T Sbjct: 135 AFLNPDLVLQTLRRLAHATPTDDATPIEPLTPREQQVLRLLMQGKTNREIARELIISPGT 194 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V + + +KL + + A+ GL Sbjct: 195 VKVHVEHIIAKLGVSDRTQAAVRALELGLVR 225 >UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=Gammaproteobacteria RepID=A5F1Q5_VIBC3 Length = 216 Score = 132 bits (332), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 78/208 (37%), Positives = 118/208 (56%), Gaps = 2/208 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V++VDDH++V G LE I+VV AS G +A++ + + DVVLMD+SMP + Sbjct: 9 IRVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSMPIMN 68 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR I K++MLT+H +VMQAGA GY+ K + ++V AI++V+ G Sbjct: 69 GIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKTVHQG 128 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Y + +I P + LS RE I+ M+ +G +I+ LN+S +TV Sbjct: 129 ATYFCESTTSTLFSQEILPVANKP--NPLSRREEAILRMVAQGCSSKKIATLLNISYRTV 186 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 ++R + KL+IH EL A++HGL Sbjct: 187 ETHRQNIKHKLDIHSTAELAQYALQHGL 214 >UniRef50_A6BYP5 Response regulator receiver domain protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BYP5_9PLAN Length = 221 Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 68/205 (33%), Positives = 122/205 (59%), Gaps = 2/205 (0%) Query: 4 VLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGL 63 V++VDDH +VR G R++E ++V GEA DA++ N D++++D+S+ GL Sbjct: 11 VMIVDDHPIVREGYSRLIEHQDDLQVCGEADSKVDAIRKIMENPPDLIIVDISLKDGSGL 70 Query: 64 EATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQR 123 E + + + +K++ +++H E + ++AGA GY++K AP++++ AI V G+ Sbjct: 71 ELIKDVKAQFSQIKMLTVSMHDETLFAERSLRAGALGYVNKQQAPEQLIKAIYQVLKGKV 130 Query: 124 YIASDIAQQMALSQIEPEK--TESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Y+++ + ++M I + +SP SLS+REL++ I +G+ I+++LNLS KTV Sbjct: 131 YLSAAVTERMICRSIGSDNYSDQSPIESLSDRELEVFEQIGEGETTRSIAQKLNLSSKTV 190 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIR 206 +YR + KLN+ LT AI+ Sbjct: 191 ETYRENIKHKLNLENATALTRHAIQ 215 >UniRef50_A9AX03 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AX03_HERA2 Length = 218 Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 77/213 (36%), Positives = 127/213 (59%), Gaps = 5/213 (2%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +L+ DD +VR G+ +L ++V+ AS G +AV+ T D++LMD+ MP + Sbjct: 1 MIKLLICDDQAVVRDGLSIMLNLAPDLEVIAVASNGREAVQLSATWQPDLILMDLKMPIM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EATR+I+ + VKI++LT + ++ + ++AGAAGYL K A ++VSAIR S Sbjct: 61 NGIEATRQISAAQPLVKILVLTTYDDDEWLFEAIRAGAAGYLLKDMAHSDLVSAIRGTVS 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFAS----LSERELQIMLMITKGQKVNEISEQLNL 176 G+ Y+ ++ ++ LSQ+ + + P + L+EREL ++ +I G I+EQL L Sbjct: 121 GKAYVDPNVTARL-LSQVATSRNQPPASQLTGRLTERELAVLNLIATGHTNASIAEQLRL 179 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 S TV ++ + SKL++ + LA+ HGL Sbjct: 180 SEGTVRNHVSTILSKLDVADRTQAALLAVEHGL 212 >UniRef50_Q470N3 Two component transcriptional regulator, LuxR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q470N3_RALEJ Length = 206 Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 67/208 (32%), Positives = 116/208 (55%), Gaps = 6/208 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I+V++ DDH +VR G RR+LE +G++VV E + A W N DV+++D+SMPG G Sbjct: 4 IDVVITDDHAVVRTGYRRLLELDEGMRVVAEFGDADTAYDWLVRNRADVLILDLSMPGRG 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLE +++ + ++ ++H + + M+AGA GYL+K +AP+ +V A+R V G Sbjct: 64 GLEMLQRLRIRVPALHTLVFSMHDSAAIVMQAMRAGAVGYLTKNSAPEALVDAVRRVAGG 123 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 R ++ DIA + + P +LS RE + +G + +++ + LS KTV Sbjct: 124 LRVLSDDIAGLL------DTGGQPPHLALSPREFDLFRQFARGTALEDVAARFCLSTKTV 177 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 +Y+ + K+ + +E+ A+ HG Sbjct: 178 ANYQTLIRKKMGLANRIEMHRYAVEHGF 205 >UniRef50_D1C1C8 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1C1C8_SPHTD Length = 237 Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 119/212 (56%), Gaps = 2/212 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I+VLLVDDH L R +R +LE I+V+GEA G A + DV+LMD+SMPG+ Sbjct: 23 ISVLLVDDHVLFRQALRHLLEAEPDIRVIGEAGDGRSAQQLAERFHPDVILMDISMPGVD 82 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ ATR + + KII+LT+ E+ + ++AGA YL K + +V+ AIR+V G Sbjct: 83 GVTATRDLKAGIPNTKIIILTMFAEDGHVIRAIRAGADAYLLKNSESSKVIDAIRAVARG 142 Query: 122 QRYIASDIAQQM--ALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 + I +A ++ +I + E A L+ERE+Q++ ++ G EI+ +L+L+ Sbjct: 143 ESVIEPQLATKLLNEFRRISEFREEETVAGLTEREIQLLRLVASGMSNKEIAAELSLAES 202 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 TV + +F KL++ + A+ HGL Sbjct: 203 TVKNRLSLLFEKLDVKDRTQAAIYALSHGLIT 234 >UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTE0_9BACI Length = 219 Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 71/214 (33%), Positives = 121/214 (56%), Gaps = 8/214 (3%) Query: 4 VLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGL 63 ++LVDDH + R+G++ IL V+ EA GE A++ D+++MD+SMPG+ G+ Sbjct: 5 IMLVDDHPVFRSGLKHILCTEADYHVIAEADDGESAIEMAAEANPDIIIMDISMPGLDGI 64 Query: 64 EATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQR 123 E TR+I R D++I+MLT++ + + + AGA+GY+ K A E+V A++ V +G+ Sbjct: 65 EVTREIKRKIPDIRILMLTMYADEAFLKESLDAGASGYVLKRAVDTELVHAVKLVMNGEH 124 Query: 124 YIASDI------AQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 YI + A Q + P+ ++ LS+RE +++ I G EIS +L +S Sbjct: 125 YIYPTLIPKLYHANQPQQDAVSPDSNQA--VELSQREQEVLKYIALGYTQKEISTELFIS 182 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 KTV++Y+ R+ K+ L A++H + N Sbjct: 183 IKTVDTYKKRVMEKIGSKKKSALVRYALKHNIIN 216 >UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3 Tax=Proteobacteria RepID=Q313W8_DESDG Length = 223 Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 73/210 (34%), Positives = 123/210 (58%), Gaps = 3/210 (1%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 ++++ +DH L+R G++ +L+ + + V GEAS G+ AV C N ++VLMD+SMP + G Sbjct: 6 SLIIAEDHTLLREGLKSLLQSVPHLIVTGEASDGQMAVDLCDRNQPELVLMDISMPRMDG 65 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 ++ATR I + +V++++LTVH + AGA GY+ K A+ E + A+ SV G+ Sbjct: 66 VQATRLIKKRHPEVRVLVLTVHGAGEYVYAALAAGADGYVLKDASNDEFILAVESVLGGK 125 Query: 123 RYIA---SDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 Y++ SD + L+ + S + +L+ RE +I ++ +G K EI+E L +S K Sbjct: 126 IYLSPGVSDAVVKGYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREIAEMLVVSVK 185 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 TV +R + KL +H EL LA+ G+ Sbjct: 186 TVEKHRSNLMQKLGVHSAAELRALALERGI 215 >UniRef50_C8WSR5 Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSR5_ALIAD Length = 231 Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 72/221 (32%), Positives = 121/221 (54%), Gaps = 4/221 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 +I VL+VDDHEL R G+ +L GI VVGEA G +A++ +T DV L+D+ MP Sbjct: 9 VIKVLVVDDHELFRRGVVTVLRSTPGIYVVGEAGNGREAIECFQTLQPDVTLLDIHMPVC 68 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GLE RK+ + + KI+MLTV + + +++GA+GY+ K +P+ ++ +R VY Sbjct: 69 NGLETARKMREANPNTKILMLTVSETEEMLFEAVKSGASGYVLKSVSPERLIECVRQVYE 128 Query: 121 GQRYIASDIAQQMALSQIEPEKTESP----FASLSERELQIMLMITKGQKVNEISEQLNL 176 G+ + S +A +M +T P L+ERE +++ ++ G EI+ L + Sbjct: 129 GEPVVPSSLAMKMIAEFSRTAETRMPSSESVTELTEREREVLQYLSAGASNKEIARALFI 188 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLSS 217 S TV ++ + KL++ + A+R+G+ L+S Sbjct: 189 SENTVRNHVRHILDKLHLSNRAQAAAYAVRNGIARGRQLTS 229 >UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=Bacteria RepID=B4VFW8_9ACTO Length = 216 Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 122/210 (58%), Gaps = 1/210 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + VLLVDDH++VR G+R LE + I+VVGEAS GE+ + DV+LMD+ MPG Sbjct: 8 VRVLLVDDHQVVRRGLRTFLEVQEDIEVVGEASDGEEGIARAEELRPDVILMDIKMPGTD 67 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA R++ +++++T TE ++AGAAGY+ K P + AIRSV++G Sbjct: 68 GIEALRRLRELANPARVLIVTSFTEQRTVVPALRAGAAGYVYKDIDPDALAGAIRSVHAG 127 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + ++A + L+Q + + S +L++RE +++ I G+ EI+ L LS KTV Sbjct: 128 HVLLQPEVAVAL-LTQDDQGPSSSRGGALTDREREVLSHIADGRSNREIARALVLSEKTV 186 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++ + KL++ + A+RHG+ + Sbjct: 187 KTHVSNILMKLDVADRTQAALWAVRHGIGD 216 >UniRef50_A7LKW1 Putative two component transcriptional regulator n=1 Tax=uncultured Methylophaga sp. RepID=A7LKW1_9GAMM Length = 217 Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 122/207 (58%), Gaps = 3/207 (1%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 +LL+DDH ++R G +++LE G +V+G++ E+ + V ++D++MPG GG Sbjct: 7 TILLIDDHAILREGYQQLLES-AGFEVIGQSGNAEEGYQAFIALQPKVCIIDLTMPGTGG 65 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 LE R+I D +I++ ++H E L + ++ GA GY++K + ++ A++SV + Sbjct: 66 LECVRRICNRDKDARILVCSMHEETTLAMRALELGAIGYITKSCSSDVLIEAVKSVAEKR 125 Query: 123 RYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVN 182 Y+ +++A+ +A+ ++ KT+ SLS +E + M+ +G + EIS+ L L+PKTV+ Sbjct: 126 HYLGAEVARSIAMEKL--IKTDQKIDSLSHQEFAVFRMVAEGMSIEEISKSLTLAPKTVS 183 Query: 183 SYRYRMFSKLNIHGDVELTHLAIRHGL 209 +Y+ M KL ++ LA + GL Sbjct: 184 NYKTNMMRKLGTTKLADIIFLAQKIGL 210 >UniRef50_C6C961 Two component transcriptional regulator, LuxR family n=24 Tax=Gammaproteobacteria RepID=C6C961_DICDC Length = 211 Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 122/210 (58%), Gaps = 6/210 (2%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDA-VKWCRTNAVDVVLMDMSMPG 59 MINV L+DDH +VR+G ++L I+VVG+ + DA V + N VDV +MD++MP Sbjct: 3 MINVALIDDHIVVRSGFAQLLSLEGDIQVVGQYASAADAGVSLLKLN-VDVAVMDIAMPD 61 Query: 60 IGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVY 119 GL ++ + + I+L+++ + AGA GYL+K P+E+V A+R+V+ Sbjct: 62 ESGLSLLARLRQKRPTFRAIILSIYDTAAFVQSALDAGACGYLTKRCGPEELVQAVRAVH 121 Query: 120 SGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 +G Y+ +D + + S+ P+ E +L+ RE +I ++ G V I+EQL+LS K Sbjct: 122 AGGSYLCADAMRALRHSRQRPKALE----ALTPREREIFDLLVNGLSVKTIAEQLDLSHK 177 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 TV+ +R + KL+ VEL H A++H L Sbjct: 178 TVHVHRANVLDKLHCATTVELVHFALQHQL 207 >UniRef50_C8WS10 Two component transcriptional regulator, LuxR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WS10_ALIAD Length = 224 Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 71/210 (33%), Positives = 121/210 (57%), Gaps = 4/210 (1%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMP-GIG 61 V++VDDH LVR G+R IL + GI+VVGE SCGEDA+K + DV+LMD+ MP G+ Sbjct: 5 RVVIVDDHALVRQGLRLILHGVAGIEVVGECSCGEDALKAAVKDRPDVMLMDVHMPQGLD 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ R + + V++IMLT+ + K++ AG +G + K E+V+AI+ G Sbjct: 65 GITTARHLRQIAPQVRVIMLTMFDDRVHVEKMLDAGVSGIVFKHDDSSEIVAAIQHGQPG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Y++ Q+ + P +T LS RE ++++++ +G E+++ L++S KTV Sbjct: 125 HPYLSRRWGQRANAETVSPSRTAE---RLSPRETEVLVLLAQGYTNREVADALHISVKTV 181 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++R + ++ +H L A ++GL + Sbjct: 182 ETHRQHIMRRIGLHSRAALVRYAYQNGLVD 211 >UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR family n=4 Tax=Bacteria RepID=D1C9Z8_SPHTD Length = 212 Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 72/211 (34%), Positives = 125/211 (59%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +L+VDDH +VR G+ ILE + + VVGEA G+ AV+ R DVVLMD++MPG Sbjct: 1 MIRILVVDDHPVVREGLVAILEAQEDLTVVGEAGDGDQAVQQYRDLKPDVVLMDLAMPGT 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G++A ++I R + ++++LT + + + +QAGA+GYL KGA +++ A+R VY Sbjct: 61 DGVQAIQEIKRIDPNARVVVLTAYDTDERILQAVQAGASGYLLKGAPREDIFRAVRVVYR 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G + +A ++ + + E L+ REL ++ ++ +G + EI+ +L+++ +T Sbjct: 121 GGSLLEPVVAGKLLNRMGDLLRGEPVEEELTARELDVLTLMARGLRNKEIAYELSITERT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V + ++ KL++ G E AI+ GL Sbjct: 181 VKFHANAIYRKLDVSGRTEAVSKAIQRGLVR 211 >UniRef50_C4XNR8 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNR8_DESMR Length = 220 Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 126/210 (60%), Gaps = 4/210 (1%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 ++L DDH ++R G+R ++++ VVGEA+ GE + +V+++D+SMP + G Sbjct: 5 RIILADDHTVLRTGLRLLIDNQPDFTVVGEAADGEALLALVERVPAEVLVLDLSMPRVSG 64 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 LE +++ ++KI++LT+H + + M AGA GY+ K A E+ AIR+V SG+ Sbjct: 65 LECIKELKSRGQEIKILVLTMHGREYV-KEAMAAGALGYIEKQALDSELFVAIRTVASGR 123 Query: 123 RYIASDIAQQM---ALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 RY++ D A+ + LS + P+A L+ RE +++ ++ +G + +I+ L+LS K Sbjct: 124 RYMSPDNAEVLLDQLLSPTPQAASPDPYAVLTAREREVLKLLVRGHTLTQIAGLLHLSVK 183 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 T+++++ + KLN+ +L A+RHGL Sbjct: 184 TIDTHKTHVMEKLNLTHKSQLVDYALRHGL 213 >UniRef50_B1M5J4 Two component transcriptional regulator, LuxR family n=7 Tax=Bacteria RepID=B1M5J4_METRJ Length = 222 Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 74/217 (34%), Positives = 121/217 (55%), Gaps = 3/217 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V L DDH +V AGIR +L I++VGEA+ G +A+ DV ++D+SMPG+ Sbjct: 5 IRVALADDHPIVLAGIRTLLNADPEIELVGEATSGSEALPMIHAADPDVAVVDVSMPGLN 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLE T ++A S ++++LTVH + +++AGA GYL K +A ++++ A+R+V +G Sbjct: 65 GLELTERVAGSCPRTRVLVLTVHEDAAYVQPLLKAGARGYLLKRSAAEDLLRAVRAVAAG 124 Query: 122 QRYIASDIAQQMALSQIEPEK---TESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 Y+ +A P + TE +LS RE ++ +I +G EI+ + +LS Sbjct: 125 GIYLDPSVASHAMAHPATPTQGGDTEPSAEALSPRETDVLRLIAQGFSNKEIARRFDLSV 184 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETL 215 K++ +Y+ R KL + E+ A HG +A L Sbjct: 185 KSIETYKARAAEKLGLRTRAEIIRYAAAHGWLDALAL 221 >UniRef50_Q021D5 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q021D5_SOLUE Length = 210 Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 80/210 (38%), Positives = 116/210 (55%), Gaps = 7/210 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I+VLLVDDH LVR G RR+LED I VVGEA G AV+ VV+MD +MP + Sbjct: 6 ISVLLVDDHSLVRRGFRRMLEDDPAIVVVGEAEDGHQAVQLAGELHPRVVVMDFAMPSMN 65 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G A R I R+ + I++L++H E ++AG GYL K A E+V+A++ V +G Sbjct: 66 GAVAARHILRTAPETAILILSMHAEASYVRTCLEAGVRGYLLKNALDLEMVAAVKQVAAG 125 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 ++ + L ++ +P A L+ REL+++ +I G+ EI+ L+LS TV Sbjct: 126 KQVL------DRRLGALDLPSGAAP-AGLTTRELEVLQLIVHGKSNKEIAAVLSLSANTV 178 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 +R + L IH EL AIR GL + Sbjct: 179 AVHRANIMQTLGIHNTAELVVYAIRQGLVS 208 >UniRef50_B4CWX5 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B4CWX5_9BACT Length = 210 Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 120/212 (56%), Gaps = 8/212 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +L+VDDH +VR+G+ L + VVGEA +AV R + DVVLMD+ +PG Sbjct: 7 IRILVVDDHHVVRSGLAASLGLEDDLNVVGEAGNAGEAVTQFRKHHPDVVLMDLRLPGAN 66 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G AT + R D +++M T + MQAGA GYL K AA +E++SAIR+V +G Sbjct: 67 GTAATADLRREWPDARVLMFTTFDGEEDIYRAMQAGARGYLLKSAAREELLSAIRAVAAG 126 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 +R++++ +AQ++A P+ +S+RE +++ +I +G+ EI+ L +S +TV Sbjct: 127 ERHLSAALAQRLAGRVAAPD--------VSDREREVLQLIARGKANKEIAAALGISEETV 178 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 + +F K+ + + T IR GL E Sbjct: 179 KRHASNLFVKMGVADRAQATSEGIRRGLIQLE 210 >UniRef50_C7MRK0 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MRK0_SACVD Length = 226 Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 75/216 (34%), Positives = 125/216 (57%), Gaps = 9/216 (4%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAV------DVVLMDM 55 + V++VDDH +VR G+R LE + +++V EA+ G++AV V VVLMD+ Sbjct: 11 VRVMVVDDHAIVRRGLRAYLETVPDLRLVSEAADGQEAVDLLNERHVVGDPMPHVVLMDL 70 Query: 56 SMPGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAI 115 MP + G+EATR I S DVK+++LT +E + AGAAGY+ K A P+EV +A+ Sbjct: 71 QMPRLDGIEATRSILASYPDVKVVVLTSFSEAERVHAALSAGAAGYVLKDAEPEEVATAV 130 Query: 116 RSVYSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLN 175 R+ G+ ++ + +A+ +A P+ SL+ RE I++++ +G EI+++L Sbjct: 131 RAAVKGEVHLDAAVARLLARRMASPQVG---VTSLTARERDILVLVGQGLSNREIADRLV 187 Query: 176 LSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 +S +T ++ + SKL + + LAIR GL + Sbjct: 188 ISERTARTHVSNVLSKLQLSSRTQAALLAIREGLVS 223 >UniRef50_A9B5L0 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5L0_HERA2 Length = 207 Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 120/210 (57%), Gaps = 4/210 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VL+VDDH +VR G+ +L + + VG+A+ G+ AV DVVL+D+ +P + Sbjct: 1 MIRVLVVDDHPVVRHGLMAMLGWEQDFEPVGDAADGQQAVNLIEQQQPDVVLLDLRLPQL 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+E R S + + ++LT + + + AGAAGYL K A+P+EV AIRS+Y Sbjct: 61 SGIEVMRHTRASAPNTRFLVLTTYDTDEYIGPALNAGAAGYLLKDASPEEVFRAIRSIYE 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G + S IA ++ L ++ E E LS+REL ++ ++ +G+ I+ LN+S T Sbjct: 121 GGAALQSGIAARV-LKRLATEPAED---ELSQRELDVLQLLVRGESNKAIALSLNISENT 176 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 + S+ +FSKL++ E +A++ GL Sbjct: 177 IKSHVSHIFSKLDVRSRAEAVAVALQRGLV 206 >UniRef50_B9TGG7 Response regulator uvrY, putative n=1 Tax=Ricinus communis RepID=B9TGG7_RICCO Length = 210 Score = 129 bits (325), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 66/209 (31%), Positives = 119/209 (56%), Gaps = 1/209 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +L+ DDH L+R G+ + + V +A+ + + R D++++D MPGI Sbjct: 1 MIRILVADDHPLIRIGLSHLCALAGDMAVTFQAATSGEVLDRIRKQDFDLLVLDTEMPGI 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G E ++ + I+ +VH E + +++ AGAAGYLSK P+ ++ AIR + S Sbjct: 61 TGAELIARVHAHVPRLPILAFSVHNEAQVVRRILYAGAAGYLSKDCDPETLLFAIRKIAS 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G R+I +A+++A + + ++++ P LS REL I+ ++ G+ VN+++ QL +S KT Sbjct: 121 GGRFIDLKLAERIAFHK-KKDESKRPHEQLSNRELCILRLLVAGKTVNDVASQLVISNKT 179 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 V++++ RM K+ + E+ I H L Sbjct: 180 VSTHKARMMEKMGFQSNAEMIRYGIDHAL 208 >UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT Length = 220 Score = 129 bits (324), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 73/215 (33%), Positives = 129/215 (60%), Gaps = 3/215 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + VLLV+DH +VR G++ +L + ++VVGE + G AV+ A DVV+MD++MP + Sbjct: 5 VRVLLVEDHTIVREGLKALLTATEDLEVVGEVADGRAAVEAAERLAPDVVVMDINMPKLD 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ ATR+I ++++L+++ ++AGA+GYL KG+ ++V+AIR V G Sbjct: 65 GVGATREIREKVNAPRVLILSMYDGEEYVRPAIRAGASGYLLKGSGLSDLVTAIREVAGG 124 Query: 122 QRYIASDIAQ---QMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 + + +A+ Q + + ++ P SL++RE +++ ++ +G+ EI++ L LS Sbjct: 125 NAFFSPTVAKILLQESRGERSVKEAPDPADSLTKREREVLTLVGEGKSSPEIAKILGLSV 184 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 KT+ +R R+ +KL +H L AIR GL +AE Sbjct: 185 KTIEGHRGRIMAKLGVHNVAGLVRQAIRIGLVSAE 219 >UniRef50_C0QJ84 Two-component response regulator protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJ84_DESAH Length = 218 Score = 129 bits (323), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 72/210 (34%), Positives = 123/210 (58%), Gaps = 2/210 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +LLVDDH+++R +++ LE+ +KV+ A G DAV+ + ++V+MD++MP + Sbjct: 6 ITILLVDDHDILRQSLKKALEEKPNVKVLQGACNGLDAVRLTEKHCPNIVIMDINMPDLN 65 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA ++I D+KII L++ + ++QAGA G+L K ++ +++ +AI V SG Sbjct: 66 GIEAAKQIISKNPDIKIIALSMLCDEFNVKSMIQAGAKGFLLKTSSLEDLHTAILMVASG 125 Query: 122 QRYIASDIAQQMALSQIEPEKTE--SPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 + Y+ + M P T+ P L+ RE ++ +I +G EISE+LN+S + Sbjct: 126 KSYLCPEALNIMMEDIQTPGDTKLLCPLQRLTLRERGVIQLIAEGYTSQEISEKLNISKR 185 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 TV+ +R +KL IH LT A++ GL Sbjct: 186 TVDVHRTNTMNKLKIHTIAGLTRFAVKEGL 215 >UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=Thermomicrobia (class) RepID=B9L2G4_THERP Length = 246 Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 76/215 (35%), Positives = 123/215 (57%), Gaps = 3/215 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+VDDH+L R G+R+++E I+VVGEA+ G+DA+K DVVLMD++MPG+ Sbjct: 28 IRVLIVDDHDLFREGLRQLIETDPAIEVVGEAANGQDALKMVAELQPDVVLMDINMPGMD 87 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ AT I + V ++MLT++ + ++AGA YL K + P+E++ AI G Sbjct: 88 GIRATEAIVQQYRHVHVLMLTMYDDEEYVLHAIRAGARSYLVKNSKPEELLRAIHVAAEG 147 Query: 122 QRYIASDIAQQMALSQIEPEKTESPF--ASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 I D+A + + + + T++P LS+REL ++ ++ +G +I++ LNL+ Sbjct: 148 GATIDPDLA-PILMREYQRLLTKAPTRGQDLSDRELTMLRLLAQGYNNRQIADALNLAES 206 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 TV + +F KL + + AI HGL T Sbjct: 207 TVKNNLSALFQKLGVRDRTQAVIYAISHGLVPRPT 241 >UniRef50_C4ZM15 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZM15_THASP Length = 226 Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 76/211 (36%), Positives = 121/211 (57%), Gaps = 1/211 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + VLLVDDH LVRAGIR +L I G+ + EAS G AV+ T D+VLMD++M + Sbjct: 4 MRVLLVDDHSLVRAGIRALLGSIAGVAGIEEASSGRQAVELAATMQPDLVLMDIAMDDMD 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GL ATR IA + +K+++L++H + ++ GA GYL K AA E+ AI +V G Sbjct: 64 GLAATRTIAAAHPHIKVVILSMHDTGDFFEQALRCGARGYLLKDAAVAELEMAIAAVMRG 123 Query: 122 QRYIASDIAQQMALSQI-EPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 Y++ +++ + + + P + E + L+ R+ +I+ +I G EI+ +L+LS KT Sbjct: 124 DVYLSPAVSRHLVGNMLARPPEDERAASVLTPRQTEILELIGSGLGTKEIARRLDLSVKT 183 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V ++R ++ +L + L A R GL Sbjct: 184 VEAHRAQIMERLGVRDIANLLLEAARRGLIT 214 >UniRef50_C6C0G1 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0G1_DESAD Length = 218 Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 73/202 (36%), Positives = 119/202 (58%), Gaps = 3/202 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 ++ V++ DDH LVR G++ IL+ GI V+G A GE+AV+ CR DV LMD+SMP Sbjct: 4 LVTVVIADDHALVREGLKTILKSQSGISVLGMAENGEEAVRLCRRLNPDVALMDLSMPIK 63 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G++A ++++ K + LT H E + AGA+GY+ K ++ +E+V AI +V Sbjct: 64 SGVQAIQELS-GEGKTKFLALTAHVEPDHIYSALDAGASGYVLKTSSSKELVMAIETVMQ 122 Query: 121 GQRYIASDIAQQMALSQIEPEKTES--PFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 G+ Y+A DI+ ++A ++ +++ S SL+ERE +++ + G K EI++ L +S Sbjct: 123 GKVYLAPDISAEVAKGFLQRDRSNSCDSLESLTEREREVLKQVLAGYKNREIADLLVISV 182 Query: 179 KTVNSYRYRMFSKLNIHGDVEL 200 KTV +R KL + EL Sbjct: 183 KTVEKHRSNFMKKLGLRSKAEL 204 >UniRef50_A8MF72 Two component transcriptional regulator, LuxR family n=14 Tax=Clostridia RepID=A8MF72_ALKOO Length = 224 Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 124/212 (58%), Gaps = 5/212 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 INVL+ DDH LVR G+++I+E IKV+G A+ GE+AV + + DVVL+D+SMP Sbjct: 11 INVLIADDHALVRQGLKQIIELEPDIKVIGLAADGEEAVLKTQQLSPDVVLLDISMPKQN 70 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++ R++ + +KIIMLT H + + + GA GY+ K A + ++ AIR VY G Sbjct: 71 GIQTLRRLKDMDSTIKIIMLTFHEDREYLFETINLGANGYVLKDAESESLIKAIRDVYQG 130 Query: 122 QRYI----ASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 YI A+++ ++ +++ +K + L+ RE +++ ++ +G EI + L +S Sbjct: 131 LNYIYPTLATELVKEFNRREVKSQKRNNE-DELTRREYEVLTLLAEGINNKEIGDCLFIS 189 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 KTV ++ +F K+N++ + A +H + Sbjct: 190 EKTVKNHVSNIFKKINVNDRTQAAIYAYKHNI 221 >UniRef50_C7RBI1 Two component transcriptional regulator, LuxR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBI1_KANKD Length = 212 Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 66/210 (31%), Positives = 122/210 (58%), Gaps = 1/210 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI V+L DDH ++R G+ +L VV EAS G +AV+ V ++D+SMP + Sbjct: 1 MIRVMLADDHTILRQGLVSLLSKDADCTVVAEASNGLEAVEKALETRPQVAVIDISMPEL 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+E ++I + KI++LT+H E +++AGA+GYL K +A +E++ A++++ + Sbjct: 61 NGMEVVKRIHDKLPECKILVLTMHEEQEYVIHMVRAGASGYLLKDSASEELIDAVKALAT 120 Query: 121 GQRYIASDIAQQMALSQIEPEKT-ESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 G+ Y + A +A +P+K + P+ +L++RE ++ ++ G+ +I+ L++S K Sbjct: 121 GKTYYSQYAASVLATQYSQPDKEWQDPYKNLTQREREVFHLVVDGKTTKDIARTLDISVK 180 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 T ++R ++ KL + EL A +H L Sbjct: 181 TAENHRGKVLDKLGVSNTAELVRYAAKHNL 210 >UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6Y1_9BACT Length = 220 Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 122/210 (58%), Gaps = 3/210 (1%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 +LL DDH++VR G+R +LE ++ EAS G AV++ A D+V++D+SMP + G Sbjct: 8 RILLADDHDIVRRGLRTLLELRSDWEICAEASDGRAAVQFAEDLAPDIVILDLSMPELNG 67 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 LEA R+IA +++MLT+H + + AG GY+ K A +++ +A+ ++ G+ Sbjct: 68 LEAARRIAAHCPRSRMLMLTMHETEQFVREALAAGVRGYILKTDAGRDLANAVDALIRGE 127 Query: 123 RYIASDIAQQMALSQIE---PEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 + AS +A + ++ + A L+ RE +I+ ++ +G+K ++ + LN+S K Sbjct: 128 TFFASRLAATIYAAEFAGMGRRRRSKSQAGLTPREREILQLLAEGRKNRDVGKALNISVK 187 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 T ++R R+ +KL I +L AIR+GL Sbjct: 188 TAETHRARIMAKLGIDSVADLVRYAIRNGL 217 >UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=Mesorhizobium loti RepID=Q98DH9_RHILO Length = 215 Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 70/208 (33%), Positives = 123/208 (59%), Gaps = 1/208 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +++ DDH +VR+GIR +LE V GEA GE AV+ R +A +V++D S+P + Sbjct: 6 IKIVIADDHPIVRSGIRAVLEQRAEWWVCGEADNGETAVRLAREHAAKIVILDYSLPVLN 65 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLEATR I R+ + ++++ T+H + L + ++AGA GYL K E+V+A+ ++ G Sbjct: 66 GLEATRIIRRTMPETEVLIYTMHEDESLIRETLRAGARGYLLKIEDDSELVAAVAALIRG 125 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Q Y + ++ + L +++ +L+ RE +++ +++G+ I+ +L +S KTV Sbjct: 126 QTYFSPRVS-ECVLQDFLDGQSDVTSRNLTNREREVVRFVSEGESNKRIAARLGVSVKTV 184 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 +S+R KL + V+L AIR+ L Sbjct: 185 DSHRTTAMRKLGLRNAVDLVRYAIRNKL 212 >UniRef50_A4VLT5 DNA-binding response regulator, LuxR family n=15 Tax=Pseudomonas RepID=A4VLT5_PSEU5 Length = 219 Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 70/208 (33%), Positives = 121/208 (58%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +LLVDDH +VR G +L+ + V EA GE A++ + + ++V++D+ +PGI Sbjct: 1 MKILLVDDHAVVRQGYASLLKALLPEVSVSEAESGEQALQQVQESIPNLVVLDLGLPGIS 60 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLE R++ + + +++ ++H E L + + AGA+GYL+K AP +V A+R V +G Sbjct: 61 GLETCRRLRQRLPLLPVLVFSMHDELALVRQALDAGASGYLTKRCAPDVLVEAVRKVLAG 120 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Q +I +A +A + ++ RE++I +M+ +G EI+E+L +S KTV Sbjct: 121 QTFIEQPLATDLACQRPSRSPVRGRLVDMTPREMEIFIMLARGIGNREIAERLCISSKTV 180 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 +++ + SKL + EL HLAI GL Sbjct: 181 SNHLALLKSKLEVSSQAELVHLAIDQGL 208 >UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZNU7_THASP Length = 220 Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 66/208 (31%), Positives = 120/208 (57%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +LL DDH++ R +R +L ++VV EA+ GE+ + VD+V MD++MPG+ Sbjct: 3 LRILLADDHQMFRHALRALLARDPELEVVAEAASGEEVLAIADAQPVDLVCMDIAMPGMD 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR++ +++I L+ + ++ AGA GY++KG A E++ AIR+V G Sbjct: 63 GIEATRRLLARHPALRVIGLSAFADRQFVTDLLAAGARGYITKGEAGDELLRAIRTVCEG 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + Y+ ++A +A + + + L+ RE Q++ +I +G +I ++L+++ TV Sbjct: 123 RSYLCPEVAATVADALRDSPGVYAAAPRLTARERQVLQLIAEGLTSVQIGDRLHIAASTV 182 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 +R + KL++H ELT AI G+ Sbjct: 183 EVHRRNLMRKLDLHNVAELTRYAIHSGI 210 >UniRef50_C7RKP7 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RKP7_9PROT Length = 216 Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 69/209 (33%), Positives = 124/209 (59%), Gaps = 2/209 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + V++VDDH +RAG+R +++ G++VV + GE A +T D V+MD+SM G G Sbjct: 8 VTVMVVDDHAALRAGLRSVIDSDPGLRVVLDVPSGEVAYAQYQTLRPDTVVMDLSMEGFG 67 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA R+I I++ TVH L + ++AGA G+++KG+ ++ AI+ + S Sbjct: 68 GIEAIRRIRSRDPQAAILVYTVHNSRVLLERALEAGALGFVTKGSDIDTLLQAIKRIASR 127 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + +++ D+ + L + P S F L++RE Q+ ++++G + E ++ LNLS KTV Sbjct: 128 ESFVSPDMLPAL-LDRHFPAGGVS-FDRLTQREFQVFKLLSEGHALPECADILNLSSKTV 185 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 +++ ++ +KL + E+ +AIR GL Sbjct: 186 SNHFTQIRAKLGVDSPAEMARIAIRQGLV 214 >UniRef50_C1I7X4 Two-component system response regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I7X4_9CLOT Length = 226 Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 121/212 (57%), Gaps = 4/212 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I ++VDDH L+R G+ RI+ + + + G+ GE+ + + DV+L+D++MPG Sbjct: 6 IRTIVVDDHALIREGLNRIISFEEDLIICGQFRSGEELLNNMKNYNPDVILLDINMPGKN 65 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+E + + D+K++MLTV + + + GA Y+ K +A E+V+AIR+VY G Sbjct: 66 GIETLKTLKILYPDIKVVMLTVENDKKTIMESIDIGADAYILKESAGSEIVNAIRNVYLG 125 Query: 122 QRYIASDIAQQMAL---SQIEPEKTE-SPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 ++YI + + + L S + + E L+ REL I+ I+KG K EI+E+L LS Sbjct: 126 EKYIDKSLIKAIFLDIKSDVACKNKEIESLKLLTNRELNILYEISKGLKNKEIAEKLFLS 185 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 KTV +Y +F K+ + V+ T AIR+ + Sbjct: 186 EKTVKNYITSIFKKIEVEDRVQATIYAIRNNI 217 >UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJD7_9MICO Length = 207 Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 70/194 (36%), Positives = 116/194 (59%), Gaps = 4/194 (2%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI V LVDDH+LVRAG+R +LE G+ VVGEA G++AV A DVVLMD+SMP + Sbjct: 1 MIRVYLVDDHQLVRAGVRTLLESDPGLSVVGEARDGQEAVAGIDAAASDVVLMDLSMPVM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EATR I + D ++++LT ++ +V+ AGA GY+ K A P ++++A+ + Sbjct: 61 DGVEATRAILSTHPDTRVLVLTSFSDRERVKEVLAAGAIGYVLKDAEPADLLAAVHAAAR 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+ I +A + S P + LS RE Q++ ++ +G +++ L ++ +T Sbjct: 121 GEVPIDPRVAGALLPSAGGPSVAD----RLSPRETQVLRLVAQGLANKQVARALGITERT 176 Query: 181 VNSYRYRMFSKLNI 194 V ++ R+F ++ + Sbjct: 177 VKAHLGRVFREIGV 190 >UniRef50_B7AAT6 Two component transcriptional regulator, LuxR family n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AAT6_THEAQ Length = 207 Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 69/208 (33%), Positives = 121/208 (58%), Gaps = 3/208 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI V+LV+DH LVR+G+R +LE ++VVGEA +A++ DV ++D+S+P Sbjct: 1 MIRVVLVEDHLLVRSGLRHLLEARGPVRVVGEAGSCREALELLEKVQADVAILDVSLPDG 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+ +++ +++++ L++H + +QAG GY+SK A QE++ A+ +V Sbjct: 61 TGIALCQRLRERFPELRLLALSMHEDLEYVRGFLQAGGQGYVSKAAVDQELLDAVLAVAR 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+RY+ +A ++A+ + E+P LS RE +++ ++ +G E++E+L +S KT Sbjct: 121 GERYLNPALAMRLAMELVRESAEEAP---LSPREEEVLRLLAQGLSHKEVAEKLGISEKT 177 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHG 208 V +YR R KL + EL A R G Sbjct: 178 VATYRERGMEKLGLASRSELLRYAARKG 205 >UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QGZ7_9SPHI Length = 218 Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 70/218 (32%), Positives = 128/218 (58%), Gaps = 12/218 (5%) Query: 5 LLVDDHELVRAGIRRILEDIKGIKVVGEASCGE---DAVKWCRTNAV---DVVLMDMSMP 58 +LVDDH +VR GIR +LE G++++ EA+ GE D +K + + D++LMD+S+P Sbjct: 1 MLVDDHSIVRDGIRLLLEQADGLEIIDEANDGEEVLDKLKVLQPDPSLLPDLILMDISLP 60 Query: 59 GIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSV 118 G+ G++ T+ I+R +V+++ML++H + ++AGA GY+ K ++ E++ AIR++ Sbjct: 61 GMSGIQTTQVISRLYKNVRVLMLSMHNNEDYILRSVEAGAYGYILKDSSSDEMIKAIRTI 120 Query: 119 YSGQRYIASDIAQQMALSQIEPEKTESPF------ASLSERELQIMLMITKGQKVNEISE 172 SG++Y +S +A + ++ K + LS +E +I+ + G EI+E Sbjct: 121 ASGEKYYSSPVASIILSGYMQQLKKGDRHGRAERQSKLSNKEKEILQFLVDGMSSREIAE 180 Query: 173 QLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 +L LS +TV+++R M +L + EL +A+ L Sbjct: 181 KLQLSVRTVDNHRANMMRRLQVRNAAELVRMAVEDKLI 218 >UniRef50_A4J6C2 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=A4J6C2_DESRM Length = 218 Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 71/215 (33%), Positives = 123/215 (57%), Gaps = 7/215 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +L+ DDH L+R G+R+IL I VVGE + G+ AV +C N VD+VLMD++MP + Sbjct: 5 IKLLIADDHILIREGLRKILSIEPHISVVGEVTNGQQAVDYCLKNPVDIVLMDINMPIMN 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA R+I + ++ II LT+H ++ ++++ G +GY+ K P +++ I V G Sbjct: 65 GIEACRQIKKLNPNIGIIALTIHDQDEYLFELIKYGISGYVLKDIHPDQLIKTILGVAQG 124 Query: 122 QRYI-----ASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNL 176 + +I A +A+ LS + +E +L+ERE++++ + KGQ I+ L + Sbjct: 125 ESFIPPSLTARVLAEFTRLSS--GDYSEKKHLNLTEREIEVLKQVAKGQSNKAIANALYI 182 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 S KTV ++ +F K+ + + AI+ L + Sbjct: 183 SEKTVKNHLTNIFQKIGVADRTQAALYAIKEKLVD 217 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 72/208 (34%), Positives = 118/208 (56%), Gaps = 4/208 (1%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 +LL DDH L R G+R +L ++V GEA+ DAV + DVVLMD+ M G+ Sbjct: 5 KILLTDDHTLFRQGVRTLLAAEADMEVAGEAANAMDAVALAQQLRPDVVLMDIGMAGMSS 64 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 EATR I + +VK+I L+++ + A+ + GA GY+ K + ++++AIR V G Sbjct: 65 FEATRLIRKERPEVKVIFLSMYDDEDYLAECVDMGANGYILKDSPADQLITAIREVQRGG 124 Query: 123 RYIASDIAQQMALS---QIEPEKTESP-FASLSERELQIMLMITKGQKVNEISEQLNLSP 178 Y++ + ++ Q T SP F +L++RE +I+ M+ +G+ V EI+ LS Sbjct: 125 SYLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKEIAAFFELSV 184 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIR 206 KTV ++++ + KL+IH +L AI+ Sbjct: 185 KTVEAHKFNLMRKLDIHNKAQLVQYAIQ 212 >UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=Proteobacteria RepID=Q09C30_STIAU Length = 213 Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 74/199 (37%), Positives = 115/199 (57%), Gaps = 5/199 (2%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MIN++LVDDH L+R GIR +LE + VVGEAS GE+AVK R + DVVLMD+ MP + Sbjct: 1 MINIVLVDDHALIREGIRSLLEFTPDLHVVGEASDGEEAVKRVRELSPDVVLMDVRMPRM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GLEA R + R + ++++LT E+ + + ++AG G+L K ++ AIR V + Sbjct: 61 TGLEALRAMRREAPERRVVLLTTFDEDSVVVEALRAGVKGFLLKDVTRDQLADAIRRVAN 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSE----RELQIMLMITKGQKVNEISEQLNL 176 G+ + +A+++ E + E P A L E REL++M +I +G EI+ L Sbjct: 121 GETLLPPGVAERVQRGFTEVPQ-EFPHAELPEGLTRRELEVMRLIARGLSNREIATVLGT 179 Query: 177 SPKTVNSYRYRMFSKLNIH 195 + TV + + +KL + Sbjct: 180 AEGTVKNQTSNILAKLGVR 198 >UniRef50_UPI00018507A5 two component LuxR family transcriptional regulator n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI00018507A5 Length = 212 Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 70/198 (35%), Positives = 117/198 (59%), Gaps = 5/198 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+ DDH L R G+ +L + +V+ EA GE+AV+ D+VLMD+ MP + Sbjct: 4 IRVLIADDHPLFRQGVSSVLANTPDNEVIAEAGSGEEAVQMACNLLPDLVLMDIQMPDLN 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATRKI D+ II++T+ ++ MQAGA GY+ K A ++++ A+R++ G Sbjct: 64 GIEATRKILSKCRDIYIIIITMFEDDTSVFSAMQAGARGYVLKDAEKEDILRAVRAIAKG 123 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFAS-----LSERELQIMLMITKGQKVNEISEQLNL 176 + +S +A +M + E T++ AS L+ RE +++ +++KG +E++E L L Sbjct: 124 EVLFSSGVASRMIDYFAQGEVTQTVVASTLFPELTSRESEVLFLLSKGASNSEVAETLGL 183 Query: 177 SPKTVNSYRYRMFSKLNI 194 S KTV +Y + +KL + Sbjct: 184 SNKTVYNYVANILNKLQV 201 >UniRef50_B8EMC5 Two component transcriptional regulator, LuxR family n=2 Tax=Rhizobiales RepID=B8EMC5_METSB Length = 232 Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 72/205 (35%), Positives = 125/205 (60%), Gaps = 5/205 (2%) Query: 2 INVLLVDDHELVRAGIRRILE-DIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 + VLLVDDH +VR G+RR+L ++ ++++ EA +A+ R+ D+V++D+++PG Sbjct: 27 MKVLLVDDHIVVREGVRRLLSVFVESVELL-EAGTTLEALSIYRSTRPDIVILDLNLPGT 85 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GGLE +++ ++++ ++HT A+ +Q+GA GY+SKGA+ +E V AI V Sbjct: 86 GGLELLKRLLIEDPRARVLIFSMHTVTLYVARALQSGARGYISKGASAEEFVEAIHQVMG 145 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G RYI ++A +AL+ ++ P SLS REL IM ++ KG+ ++ I++ L +S KT Sbjct: 146 GGRYIERELAADLALNVF---GSQDPGKSLSARELDIMRLLAKGKSLSAIADTLGVSYKT 202 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAI 205 + + M KL + +L LA+ Sbjct: 203 IANTCTAMKHKLLVQRTSDLIRLAV 227 >UniRef50_C0N6J7 Sigma-70, region 4 family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6J7_9GAMM Length = 168 Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 105/163 (64%), Gaps = 2/163 (1%) Query: 49 DVVLMDMSMPGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAP 108 D+VL+D+++PG+GGLE R+I + D K++M ++H + ++ MQAGA GY++K A Sbjct: 8 DMVLLDITLPGVGGLEVLRRIRANREDAKVLMFSMHEDPVFASRAMQAGARGYITKNNAA 67 Query: 109 QEVVSAIRSVYSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVN 168 +V A+ V G+ Y++ D+AQQ+A+ I+ S + LS REL+I+ ++ +G+ +N Sbjct: 68 DHLVEAVEKVLDGKIYLSPDMAQQLAMLNIDA--GTSALSDLSRRELEILRLLGEGKSMN 125 Query: 169 EISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 EIS+ L +S KTV + ++ SKL+I EL AI HGL + Sbjct: 126 EISDVLGISYKTVANNLTQIKSKLDISKTAELMRFAISHGLSS 168 >UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37 Tax=Bacteria RepID=D1AEE5_THECD Length = 244 Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 74/215 (34%), Positives = 124/215 (57%), Gaps = 6/215 (2%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNA-----VDVVLMDMSM 57 +LL DDH LVR G+R IL+ + VVGEA G +A++ R A VD+ ++D++M Sbjct: 29 RILLADDHALVRRGVRLILDGEPDLWVVGEAGDGAEAIEQVRRRAGTPQEVDLAVLDVAM 88 Query: 58 PGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRS 117 P + GL+A R+++R ++I++LT+H + ++AGAAGY+ K A +++V A R+ Sbjct: 89 PRMTGLQAARELSRMYPRLRILILTMHDNEQYLFEALKAGAAGYVLKSLADRDLVQACRA 148 Query: 118 VYSGQRYIASDIAQQMALSQIEPEKT-ESPFASLSERELQIMLMITKGQKVNEISEQLNL 176 G+ ++ + S +E + E P L+ RE +I+ ++ +G EI++ L + Sbjct: 149 AVRGEPFLYPGAISVLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSREIADTLFI 208 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 S KTV +R + +KL + +ELT AIR GL Sbjct: 209 SVKTVERHRANILAKLGMKDRLELTRYAIRTGLIE 243 >UniRef50_D1AAU8 Two component transcriptional regulator, LuxR family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AAU8_THECD Length = 220 Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 76/209 (36%), Positives = 127/209 (60%), Gaps = 2/209 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+ DDH + R G+R +LE + G++VVGEA G AV+ DVV+MD+ MPG Sbjct: 10 IRVLITDDHPVFRQGLRGLLEAL-GVEVVGEAESGPQAVQLAAELQPDVVVMDLHMPGGN 68 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR I R++ + +++LT+ ++ M+AGA GYL K + +E+ A+R+V +G Sbjct: 69 GIEATRTITRTSPRIGVLVLTMFRDDDSVFAAMRAGARGYLLKESGAEEIARAVRAVAAG 128 Query: 122 QRYIASDIAQQMALSQIE-PEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 + +IA+++ + P+ ++ F L+ERE +++ +I +G+ EI++ L LSPKT Sbjct: 129 EAIYGPEIARRVLTYFADMPDPKQTAFPELTEREREVLQLIAQGRSNGEIAQTLFLSPKT 188 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 V ++ +F KL++ + LA GL Sbjct: 189 VRNHVSNIFMKLHVADRAQAIVLAREAGL 217 >UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QSJ5_9RHOB Length = 212 Score = 126 bits (316), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 76/210 (36%), Positives = 121/210 (57%), Gaps = 2/210 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLL DDH LVR GIR L + I+VVGEA+ G +AVK DV+LMD+SMP + Sbjct: 5 IRVLLADDHALVRDGIRARLNKVPEIEVVGEATNGREAVKLAHELRPDVLLMDVSMPVMN 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLEA ++ +S ++ +++L+++ + V+QAGA GY+ K + E+++AI SV SG Sbjct: 65 GLEAAAEVRKSFPEIAVLILSIYDNSEYVRGVVQAGARGYILKDISAPEMITAISSVASG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Y +S + + + E P+ L++RE Q++ I KG E+++ L +S +TV Sbjct: 125 GYYFSSAVGPTL-VGTATSAPIEDPYG-LTDRERQVLTAIAKGLPNKEVAKSLGISVRTV 182 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 S+R + K+ +L +A GL + Sbjct: 183 ESHRLNLREKVGNKNAAQLYKVAQDLGLLD 212 >UniRef50_C6DD36 Two component transcriptional regulator, LuxR family n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PC1 RepID=C6DD36_PECCP Length = 218 Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 113/209 (54%), Gaps = 4/209 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MINV LVDDH +VR+G ++L I+VVG+ + A +DV ++D++MP Sbjct: 10 MINVALVDDHIVVRSGFAQLLALENDIQVVGQYASAAQAWPHLLKQPIDVAVIDIAMPDE 69 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GL ++ + + I+L+++ + AGA GYL+K P+E+V A+R V S Sbjct: 70 SGLSLLTRLRQQRPQFRAIILSIYDTTAFVQSALDAGAGGYLTKRCGPEELVQAVRVVSS 129 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G Y+ +D + Q P++ +L+ RE +I ++ G V I+EQL LS KT Sbjct: 130 GGIYLCADALHAIRHQQQPPKE----LLALTPREREIFSLLINGISVKSIAEQLELSHKT 185 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 V+ +R + SKL VEL H A++H L Sbjct: 186 VHVHRANILSKLQCESTVELVHFALQHQL 214 >UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH Length = 211 Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 70/208 (33%), Positives = 125/208 (60%), Gaps = 4/208 (1%) Query: 4 VLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGL 63 VL+ DDH+LVR GI ++LE + IKVVGEA G + VK R + D+VL+D++MP +GG+ Sbjct: 6 VLVADDHDLVREGICKLLELYEDIKVVGEAGDGLETVKGVRDHFPDLVLLDLNMPRMGGI 65 Query: 64 EATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQR 123 A +KI + +K+++LT+H E +V+++GA GY+ K P+E+ AI V G + Sbjct: 66 TAIKKIKEISPGIKVLILTIHDEEEYVYEVIRSGAEGYIQKDVKPEELKRAIDKVIKGDK 125 Query: 124 YIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVNS 183 + + + ++ EK E LS RE +++ ++ +G +I+++L +S KTV + Sbjct: 126 VFPR--STENEVREVVNEKYE--VCELSSREQEVLELLAQGMSNKQIAQELFISEKTVKN 181 Query: 184 YRYRMFSKLNIHGDVELTHLAIRHGLCN 211 + + KL+++ + +A++ GL + Sbjct: 182 HVSNILRKLSVNDRTQAVIVALKRGLVS 209 >UniRef50_B2KBW2 Two component transcriptional regulator, LuxR family n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBW2_ELUMP Length = 215 Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 73/216 (33%), Positives = 127/216 (58%), Gaps = 7/216 (3%) Query: 1 MINVLLVDDHELVRAGIRRILEDI-KGIKVVGEASCGEDAVKWCRTNA-VDVVLMDMSMP 58 MI +LL DDH LVR GI+ ILE K I VV E G++ + + N +DV ++D++MP Sbjct: 1 MIRILLADDHALVRDGIKSILERKGKNISVVAEMGNGKEMLDYAVKNKNIDVYVVDIAMP 60 Query: 59 GIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSV 118 + G+ A +K+ + D K+I+L+++ + K +AGA G++ K ++ E++ AI+ V Sbjct: 61 ILNGIAAVQKLLKINPDAKVIVLSMYDDRASVEKAFKAGARGFVVKVSSADEIIEAIKEV 120 Query: 119 YSGQRYIASDIAQ---QMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLN 175 +G+ Y+ S +++ Q L + P K + + L+ +E QI+ +I +G EI+++ Sbjct: 121 SAGRFYLCSKVSKFVVQGFLGKASPSKKDP--SGLTPKEKQILQLIAEGFSSKEIAKEFG 178 Query: 176 LSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 LS TV+ +R + KL+IH EL AI+ G+ + Sbjct: 179 LSLNTVHVHRNNIMRKLDIHKQAELVRYAIKEGIAH 214 >UniRef50_A5FIE9 Two component transcriptional regulator, LuxR family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FIE9_FLAJ1 Length = 213 Score = 126 bits (316), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 65/210 (30%), Positives = 123/210 (58%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 IN+L+ DDH + GI +LE I ++ +A G +A++ + VD +++D+SMP + Sbjct: 4 INLLIADDHTMFLQGIISLLEQEPNITIIDKAVNGIEALEIIKKGVVDFIILDISMPEMD 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+E ++ + + +VKI++++ H+ + +++++ G GYL K AA +E++ AI ++ SG Sbjct: 64 GIELSKILKKQHPNVKILIVSTHSNVMIVSRLIRIGVNGYLLKNAAKEELLKAINTIASG 123 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + Y A ++ ++ + + EK S LS RE +I+++I EI+E+ +S TV Sbjct: 124 ENYFAEELEEKHLSNSSKIEKQVSNLTELSSREKEILVLIAHEYNTAEIAEKTFISLNTV 183 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 N++R + SKLN L A+ +GL + Sbjct: 184 NTHRRNLLSKLNAKNTAGLVKYAVENGLVD 213 >UniRef50_D1C6S1 Two component transcriptional regulator, LuxR family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6S1_SPHTD Length = 223 Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 75/213 (35%), Positives = 124/213 (58%), Gaps = 5/213 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I++LLVDDH L R G+ +L VVGEA+ GE+AV+ R DVVLMD+ +PGI Sbjct: 4 ISLLLVDDHALFREGLASLLSYQPDFTVVGEAASGEEAVERARELVPDVVLMDIDLPGID 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR+I R +V+++MLTV+ ++ + ++AGA GYL K E++ +R + G Sbjct: 64 GIEATRRIKRQLPEVRVVMLTVYDDHERLFQSIKAGAQGYLIKNIRSAELLDQLRGLARG 123 Query: 122 Q----RYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 + R +A+ I ++ A + + E E P LS RE++++ ++ EI+ +L++S Sbjct: 124 EAAISRRMAARILEEFARLERQAEILE-PDGGLSPREVEVLELVALRLSNKEIAARLSIS 182 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 TV ++ + +KL + + A+ HGL Sbjct: 183 EHTVKNHLKNILAKLQLSSRRQAAAYAVAHGLI 215 >UniRef50_A5URU4 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexi (class) RepID=A5URU4_ROSS1 Length = 242 Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 76/219 (34%), Positives = 125/219 (57%), Gaps = 13/219 (5%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL++DDH L R GIR LE+ ++VVGEA G++A+K DVVL+D+++PG+ Sbjct: 5 IRVLIIDDHPLFRQGIRWSLEEAGDMEVVGEAENGQEAIKLAERLVPDVVLVDINLPGLN 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLE R I R + +I+++V+ ++ + ++ GAA Y SK P+++V IR V G Sbjct: 65 GLEVARVIKRREPRIGLIVISVYEDDDQLFQAIKVGAAAYSSKDVHPRDLVRMIREVARG 124 Query: 122 QRYIASD------------IAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNE 169 +Y+ +D + Q L+ E E+T + FA L+ RE++I+ I +G E Sbjct: 125 -KYLINDSVIAKPHVATRVLHQFRELAATEDERTSALFAPLTSREIEILDCIARGLSNKE 183 Query: 170 ISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHG 208 I+ QL++S +TV ++ + SKL ++ AI+ G Sbjct: 184 IASQLSISGQTVKNHITSILSKLQVNDRTMAVIYAIQRG 222 >UniRef50_P0AGA8 Transcriptional regulatory protein uhpA n=167 Tax=Gammaproteobacteria RepID=UHPA_ECO57 Length = 196 Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 73/200 (36%), Positives = 114/200 (57%), Gaps = 12/200 (6%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI V L+DDH +VR+G ++L ++VV E G +A+ V V + D+SMP I Sbjct: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GLE ++ + A IML+VH L + + AGA G+LSK +P E+++A+ +V + Sbjct: 61 SGLELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G Y+ DIA ++A + +P L++RE Q+ + +G V EI+ +L LSPKT Sbjct: 118 GGCYLTPDIAIKLASGRQDP---------LTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 Query: 181 VNSYRYRMFSKLNIHGDVEL 200 V+ +R + KL + DVEL Sbjct: 169 VHVHRANLMEKLGVSNDVEL 188 >UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromonadales RepID=Q485W6_COLP3 Length = 215 Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 68/208 (32%), Positives = 120/208 (57%), Gaps = 4/208 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 ++V +VDDH +V+ G++ L I +VG G DA+ DV+LMD+SMP + Sbjct: 9 VSVQIVDDHPMVQGGLKACLSFYDDIIIVGSTDDGSDALNKAIELKPDVILMDISMPTMN 68 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++AT I + K+++L++H+ +QAGA GYL K +E+ AI++V +G Sbjct: 69 GIDATEIITEQLPETKVLILSMHSNPEFVKSAIQAGAVGYLLKDTTSEEIYYAIKAVANG 128 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + + +S IA+ + + + ++E L+ RE ++ + KG+ EI++ LN+S +TV Sbjct: 129 KTHFSSSIAKLLIDNPVNTNESE----KLTTREQVVLSYLAKGKTSKEIAKILNISFRTV 184 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 ++R M +KL IH +L A++HG+ Sbjct: 185 EAHRRNMKTKLGIHSLAKLISYAVKHGI 212 >UniRef50_B3E9K5 Two component transcriptional regulator, LuxR family n=1 Tax=Geobacter lovleyi SZ RepID=B3E9K5_GEOLS Length = 214 Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 72/214 (33%), Positives = 121/214 (56%), Gaps = 4/214 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIK--GIKV-VGEASCGEDAVKWCRTNAVDVVLMDMSM 57 M +LLVDDH +VR G+ IL ++ G+ + EA GEDA+ + D+V++D++M Sbjct: 1 MKRLLLVDDHAMVRKGLVSILSVLQEDGMLLSCDEAGSGEDALGLLKQYRYDLVVLDIAM 60 Query: 58 PGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRS 117 P +GGLE I + + ++ML++ E + ++ GA+GYL+K A E++ A+ Sbjct: 61 PELGGLELLSIIHENWPTLPVLMLSMFPEEQFALRSLKLGASGYLTKKEAADELLLAVGQ 120 Query: 118 VYSGQRYIASDIAQQMALSQIEPEKTESP-FASLSERELQIMLMITKGQKVNEISEQLNL 176 + G+RY++ ++ + + P A+LS RE QI+ + G+ + I+ L L Sbjct: 121 LLKGKRYLSQSLSTSLINQALASGDNSRPSHATLSNREFQILRSLATGKSLKAIALDLEL 180 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 S KTV++Y+ R+F+KL H DV+L A H L Sbjct: 181 SIKTVSTYKARLFAKLGFHNDVDLIAYANNHQLT 214 >UniRef50_C9M9U6 Response regulator GacA n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M9U6_9BACT Length = 217 Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 70/215 (32%), Positives = 120/215 (55%), Gaps = 4/215 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI ++L+DDH + AG+ I ++VVG A GE + R DV ++DM+MP I Sbjct: 1 MIRLVLIDDHRMFIAGLMEIFASRPDLQVVGSAPDGESGLAVVREQRPDVAVLDMTMPSI 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GG+E R++ S + KI+ L++H + +++++ GA GYL K A E+++A+R+V Sbjct: 61 GGVECARRLVESFPETKILALSMHNDLRFISELLRIGAKGYLLKDCATDELLTAVRTVAE 120 Query: 121 GQRYIASDIAQQMALSQIEPEKT--ESPFAS--LSERELQIMLMITKGQKVNEISEQLNL 176 G+ Y+A + Q + + ++ + P S LSERE ++ ++ +G I ++L + Sbjct: 121 GRLYLAGGVVQLLVEDYLRLKRAVHDGPARSMVLSEREKSVLALMAQGLTSKAIGDELGI 180 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 S TV+++R RM KL + EL A R L + Sbjct: 181 SKNTVDTHRRRMMDKLGCNSVAELLRHAYREELLD 215 >UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides sp. JS614 RepID=A1SGL7_NOCSJ Length = 213 Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 76/209 (36%), Positives = 118/209 (56%), Gaps = 3/209 (1%) Query: 4 VLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGL 63 +L+VDD EL R G+ +L GI+VVGEA G + T A DVVL+D+ MP G+ Sbjct: 1 MLVVDDQELFRRGLTMLLGTEAGIEVVGEAGDGVEGTNLAATAAPDVVLLDIRMPKRSGI 60 Query: 64 EATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQR 123 EA I + KIIMLTV E + +++GA+GYL K ++ +EV A+R V GQ Sbjct: 61 EACLAIKEAVPSAKIIMLTVSDEEADLYEAVKSGASGYLLKDSSIEEVAQAVRVVADGQS 120 Query: 124 YIASDIAQQM--ALSQI-EPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 I+ +A ++ Q+ PE+ P L+EREL+++ ++ KG EI+++L +S T Sbjct: 121 LISPSMAVKLIDEFKQMSRPERDHVPGLRLTERELEVLRLVAKGMNNREIAKELFISENT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 V ++ + KL +H +E A++ L Sbjct: 181 VKNHVRNILEKLQLHSRMEAVMYAVKEKL 209 >UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR family n=29 Tax=Alphaproteobacteria RepID=Q1GIA7_SILST Length = 233 Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 68/208 (32%), Positives = 119/208 (57%), Gaps = 6/208 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+VDDH +V GI+ ILE I+VVG S G +A+ DV+LMD++MP +G Sbjct: 24 IRVLIVDDHPMVAEGIQSILESYGDIEVVGAVSSGREAIARAEALVPDVILMDLNMPDVG 83 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GL AT I ++++++L++H + GA GY+ K P+E+ +AI +V G Sbjct: 84 GLSATEIIQERCPEIRVLILSMHDSPEYITTALSHGAVGYVLKDVQPEEIKTAIDAVMRG 143 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 ++Y+ + A ++ ++++ +L+ RE I+L + +G+ E+++ L++S +TV Sbjct: 144 EQYLCTGAAGSLS------PQSQTSREALTGREQTILLELAQGKSNKEVAQALDISVRTV 197 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 ++R + KL I LT A+ HG+ Sbjct: 198 ETHRKNIKRKLGISSTAGLTRYALEHGV 225 >UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZFU2_9SPHI Length = 219 Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 67/202 (33%), Positives = 116/202 (57%), Gaps = 3/202 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNA--VDVVLMDMSMPG 59 I V++ DDH +V G+ +++ I+V+G A G A K N VD+ ++D+ MP Sbjct: 7 IKVIIADDHHMVLEGLEALIKVTNDIEVIGLAYNGHHAFKLLELNQLDVDIAVLDVDMPV 66 Query: 60 IGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVY 119 GLE TRKI ++K+++LT+H +++ AGA+GY+ K E+V+AIR++Y Sbjct: 67 QDGLETTRKIRTEYPNIKVLILTMHNNESYIKEIIAAGASGYILKNRGASELVNAIRTIY 126 Query: 120 SGQRYIASDIAQQMALSQIEPEKTE-SPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 +G+ Y + + + S E +K + +P L++RE +++ +I KG EIS+QL ++ Sbjct: 127 AGEEYFSKAVTDTLIKSIQESKKAKPNPQVKLTKREKEVLALIGKGMTTKEISKQLFIAD 186 Query: 179 KTVNSYRYRMFSKLNIHGDVEL 200 TV ++R + KL + EL Sbjct: 187 TTVETHRRNLIDKLEVKNSKEL 208 >UniRef50_A1SKW0 Two component transcriptional regulator, LuxR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SKW0_NOCSJ Length = 215 Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 114/210 (54%), Gaps = 6/210 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+VDDH L R G RRILE + VVG+A+ GEDA+ VVLMD+ +PG+ Sbjct: 6 IAVLVVDDHTLHRDGTRRILEQYDDVDVVGDAASGEDALAMVNRLHPRVVLMDIRLPGMN 65 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR+I D +++++T + + GAAGYLSK A +E+V A+R+V G Sbjct: 66 GIEATRRIRERHPDTRVLIVTAYDDEEYVRGAFDVGAAGYLSKTAPGRELVEAVRAVAGG 125 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + Q L K SP +L++RE ++ ++ +G +I+ +L +S +TV Sbjct: 126 NSVL------QPTLMAALLAKRSSPANTLTDRERAVLRLLAEGMHNKQIASRLGISARTV 179 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 + R++ KL + E AI L + Sbjct: 180 ERHCDRIYGKLGVTSRTEAVVRAISANLLD 209 >UniRef50_C3BGJ6 Two component transcriptional regulator, LuxR n=5 Tax=Firmicutes RepID=C3BGJ6_9BACI Length = 201 Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 122/200 (61%), Gaps = 2/200 (1%) Query: 13 VRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGLEATRKIARS 72 +R+G++ +L+ +KVVGEAS G +A++ D++++D+S+P + G++ +I Sbjct: 1 MRSGLKLLLQKRPSLKVVGEASDGLEALRLYDILRPDILILDISLPRLDGIQVLTEIKLR 60 Query: 73 TADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQRYI-ASDIAQ 131 K+I+LT+H + +M AGA+GY+ K A +E+ +AI SV G Y+ +I+ Sbjct: 61 YEQAKVIVLTMHEDEDYVTLIMNAGASGYVPKAAVDEELYTAIDSVMDGYLYLRPKEIST 120 Query: 132 QMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVNSYRYRMFSK 191 + Q E E + +P+ LS RE +++ + KG ++EI+++L +S KTV++++ RM +K Sbjct: 121 MLKRLQNETE-SRNPYVILSPREREVLQFLVKGFSLSEIAQELTISIKTVDTHKTRMLNK 179 Query: 192 LNIHGDVELTHLAIRHGLCN 211 LN+ EL AI++ L N Sbjct: 180 LNLSKKSELVQYAIKYNLIN 199 >UniRef50_A3K876 Two-component response regulator n=2 Tax=Rhodobacteraceae RepID=A3K876_9RHOB Length = 213 Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 117/210 (55%), Gaps = 2/210 (0%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 +V+++DDH +VR G RR+++ G+K+VGEA A R DVV+MD+++PG G Sbjct: 5 SVIIIDDHPVVREGYRRLIDLQPGLKIVGEAEDARSAYAAFRDLRPDVVVMDVTLPGASG 64 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 +EA R I + +I++ T+H K ++AGA Y++K + P+ +V AI GQ Sbjct: 65 IEAIRHIRQYDDGARIVVFTMHLSAAFALKAIKAGATSYITKSSDPKVLVEAIFGALRGQ 124 Query: 123 RYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVN 182 I+ D+ + +A I T + LS R+ +I+ ++ +G I+ +L++S KTV Sbjct: 125 TVISPDVIEAIARDSISGIGTG--LSDLSPRQTEILCLLARGWSAERIAGELSISQKTVR 182 Query: 183 SYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 + Y++ S L + D +L A+ GL A Sbjct: 183 NNHYQIKSILGLETDAQLVWFALETGLLQA 212 >UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC-HTH domains) n=7 Tax=Bacteria RepID=B3DW63_METI4 Length = 243 Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 69/205 (33%), Positives = 119/205 (58%), Gaps = 2/205 (0%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 VL+VDDH ++R G+ +++ G+ V G A + + DVVL+D+S+PG G Sbjct: 20 KVLIVDDHAILREGLIQLINSTPGLSVCGAAKNAHEGFELIEKTMPDVVLVDISLPGKSG 79 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 LE + I + D+ +++L++H E+ +V++AGA GYL K Q++++AI+ V +G Sbjct: 80 LELIKDIHAAYPDIALLVLSMHEESLYAERVLRAGARGYLMKNEGGQKLIAAIQKVLAGG 139 Query: 123 RYIASDIAQQM--ALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 ++ +A ++ +S + SP +LS+RE ++ +I KG +I+EQL+LS KT Sbjct: 140 ISVSERVANRILQGVSGKRKALSISPIEALSDREFEVFQLIGKGYGSRQIAEQLSLSVKT 199 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAI 205 V +YR + KL + +L H AI Sbjct: 200 VEAYRASIKQKLYLKSGPQLVHYAI 224 >UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ Length = 218 Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 70/216 (32%), Positives = 125/216 (57%), Gaps = 7/216 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMP-GI 60 + +++ DDH +VR G IL + ++VV A+ G +A + + DV+++D+SMP G Sbjct: 1 MKIVIADDHAVVRTGFSMILNYQEDMEVVATAADGVEAYQKVLEHRPDVLILDLSMPPGE 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GL AT KI+ S D KI++LT+ + V+++GA GY+ K + ++++ A+R+VY Sbjct: 61 SGLIATSKISESFPDTKILILTMFDDEEYLFHVLKSGAKGYILKNSPDEQLILAVRTVYQ 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTE------SPFASLSERELQIMLMITKGQKVNEISEQL 174 G+ Y+ + + + +T+ PF LS+REL+I+ +I KG +I+E+L Sbjct: 121 GETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNKDIAEKL 180 Query: 175 NLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 +S KTV +++ + +KLN+ EL A++ L Sbjct: 181 FVSVKTVEAHKTHIMTKLNLKSKPELVEYALKKKLL 216 >UniRef50_A1WN26 Two component transcriptional regulator, LuxR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WN26_VEREI Length = 222 Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 113/204 (55%), Gaps = 2/204 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I L+VDDH +VR+G R LE + G +VV EA C +A + DVV+MD+ + G Sbjct: 6 IRTLIVDDHAVVRSGYRSYLEQVPGFQVVAEADCANEAYAQYKRMHPDVVIMDIMLQGAS 65 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++A+R+I + KI++ +++ L + + G G + K P + A +V G Sbjct: 66 GIDASRRILSNHPGAKILIFSMYVSPVLLQQALNVGVLGAVGKQCDPDTLREAAIAVAGG 125 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 RY+ + +AQ + S+ ++ + F +LS RE +I L++ G V EI++ LNLS KTV Sbjct: 126 DRYLDASMAQSLVFSRY--DRGQKIFDALSPREFEIFLLLISGAPVKEIAQALNLSAKTV 183 Query: 182 NSYRYRMFSKLNIHGDVELTHLAI 205 + + KL + D++L LA+ Sbjct: 184 ANRASMIRQKLGVSSDIQLVKLAV 207 >UniRef50_Q3BU15 Two-component system response regulator, LuxR family n=12 Tax=Xanthomonadaceae RepID=Q3BU15_XANC5 Length = 221 Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 119/206 (57%), Gaps = 1/206 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + V++VDDH LVRAG+ R+L+ GI VVGEAS + A+ + D+VLMD+S+PG Sbjct: 12 VRVIIVDDHTLVRAGLSRLLQTFAGIDVVGEASNAQQALDMTSLHRPDLVLMDLSLPGRS 71 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GL+A + R+ ++M+++H + + GA G++ K AAP E+ A+R+ +G Sbjct: 72 GLDAMTDVLRAAPRTHVVMMSMHDDPVHVRDALDRGAVGFVVKDAAPLELELALRAAAAG 131 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Q +++ I+ +M + EK A+LS R+ +I+ I +GQ EI+ L +S KTV Sbjct: 132 QVFLSPQISSKMIAPMLGREKPVG-IAALSPRQREILREIGRGQSNKEIAADLGISVKTV 190 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRH 207 ++R RM L +L LA +H Sbjct: 191 ETHRARMMESLGCRRANDLVLLAAKH 216 >UniRef50_Q023R1 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q023R1_SOLUE Length = 214 Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 69/213 (32%), Positives = 121/213 (56%), Gaps = 2/213 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +LL DDH ++ +GI+ +LE +V+G G ++ D+V++D+SMP + Sbjct: 4 LRILLGDDHAMILSGIKGLLEG--HYEVIGSEKNGRALIETAVRLKPDLVVLDVSMPILN 61 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++A R+I ++ K+I LT+HT K + AGA+GY+ K A +E+++AI V G Sbjct: 62 GIDAAREIKKALPAAKLIFLTMHTNAIYLRKALHAGASGYVLKSGAAEELLTAIEEVCKG 121 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Y+ D Q + S ++ +L++R+ I+ ++ +G++ EI E ++S +TV Sbjct: 122 YIYVGPDFGQDVIESIRSTGDSQGGLPALTDRQRHILQLLAEGKQNKEIGEIAHISVRTV 181 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 +R R+ S+L H ELT AI+ GL + ET Sbjct: 182 EFHRSRLMSRLGAHSVAELTRFAIQEGLIDGET 214 >UniRef50_A5G586 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=A5G586_GEOUR Length = 226 Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 75/214 (35%), Positives = 119/214 (55%), Gaps = 2/214 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLLVDDH+++R G++ IL I+VV EA+ G +A++ DVV+MD++MP + Sbjct: 13 IRVLLVDDHKIMRKGLKAILALEHTIEVVAEAANGREAIRKADELLPDVVVMDLTMPEMN 72 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA R+I + DV+ ++L++ + + +AGA GYL K A +E+V AI +V SG Sbjct: 73 GIEAIRQIVAAHPDVRTLVLSMVLDRACVMETFKAGATGYLLKDCAVEELVGAIHTVASG 132 Query: 122 QRYIASDIAQQMALSQIEPEKTES--PFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 + Y+ I + + S LS+RE +++ +I G EI+ +S K Sbjct: 133 EPYLCPQITSLVIRDYTKGADANSSDSCVQLSKREREVLQLIANGNSTKEIAFTFGVSIK 192 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 TV R + KLN+ +LT A+R GL + E Sbjct: 193 TVAVQRMSVMKKLNLFNVADLTKYAVREGLTSIE 226 >UniRef50_A6WBE1 Two component transcriptional regulator, LuxR family n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6WBE1_KINRD Length = 215 Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 74/213 (34%), Positives = 122/213 (57%), Gaps = 8/213 (3%) Query: 5 LLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGLE 64 ++VDD E++R G+R I+ ++V A G +A+K + AVDVVLMD+ MPGI G+E Sbjct: 1 MIVDDQEMIREGLRTIIGAHPDLQVAAVAGDGLEALKLLESTAVDVVLMDIRMPGIDGVE 60 Query: 65 ATRKI--ARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 ATR+I RS+A V+I +LT + + ++AGA G+LSKGA P E+ + I + G Sbjct: 61 ATRRIRATRSSAQVRICVLTTFDNDENVLRALKAGADGFLSKGAGPTELTAGILDIAGGG 120 Query: 123 RYIA----SDIAQQMALSQIEPEKTES--PFASLSERELQIMLMITKGQKVNEISEQLNL 176 ++ S + +A P+ ++ FA+L+ RE +++ I G +I+E + + Sbjct: 121 SALSPTALSAVVTHVAEDNSVPDDPQALKLFAALTAREREVVEAIVTGLDNQQIAEAMFV 180 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 SP TV ++ R SK+ +L +A+R G+ Sbjct: 181 SPFTVKTHANRAMSKVGARDRAQLVSMAVRAGM 213 >UniRef50_Q3K943 Putative LuxR family response regulator n=4 Tax=Gammaproteobacteria RepID=Q3K943_PSEPF Length = 208 Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 71/209 (33%), Positives = 119/209 (56%), Gaps = 2/209 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 M +V +VDDH ++R +R +LE +G KVVGE G DA++ R D++++D+S+P + Sbjct: 1 MNSVFIVDDHPVIRLAVRMLLEH-EGYKVVGETDNGVDAMQMVRECMPDLIILDISIPKL 59 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GLE + ++ K ++LT + MQ+GA+GY+ K E+VSAI++V S Sbjct: 60 DGLEVLARFNAMSSPFKTLVLTAQCPTLFGIRCMQSGASGYVCKQEDLSELVSAIKAVLS 119 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G Y S + + + E F S+++REL ++ + +G+ EI++ + LS KT Sbjct: 120 GYNYFPSQALNPVRHDDVRYAELEL-FKSVNDRELMVLQLFAQGRTNKEIAKGMFLSNKT 178 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 V++Y+ R+ KL VEL +A R+ L Sbjct: 179 VSTYKKRLMQKLKAKSLVELIEMAKRNAL 207 >UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=Q2RMH6_MOOTA Length = 221 Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 128/222 (57%), Gaps = 13/222 (5%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSM-PGI 60 I V+LVDDH LVR G+R +LE I+VVGE + + +VV+MD+ + G Sbjct: 3 IRVMLVDDHALVREGLRALLEREGDIEVVGETGSAAGVLALAEESRPEVVVMDLQLGAGR 62 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EATR++ ++K+++L+++ + L + +++GA GY+ K A +E+ +AIR V Sbjct: 63 NGVEATRELVEKKPEIKVVILSMYDDEELVFRALESGARGYVLKRAGIEELTTAIRLVAR 122 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFA--------SLSERELQIMLMITKGQKVNEISE 172 G+ Y+ IA+++ IE + PF L+EREL+++ + +G EI+ Sbjct: 123 GEAYLDPQIARRV----IEGLQERLPFTRASRPEGPELTERELEVLRLAAEGLTNAEIAR 178 Query: 173 QLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 +L +S KTV ++R + KL +H V+L AI++G+ ++ Sbjct: 179 RLVISVKTVQAHRANIMQKLGLHDRVDLVKYAIKNGILKLDS 220 >UniRef50_C7MUJ2 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=101 Tax=Bacteria RepID=C7MUJ2_SACVD Length = 239 Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 73/216 (33%), Positives = 121/216 (56%), Gaps = 7/216 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + V+L DD +LVRAG R IL GI+VVGEA G +AV+ DVVLMD+ MP + Sbjct: 21 LRVVLADDQDLVRAGFRVILSSDDGIEVVGEAGDGWEAVEVATRERADVVLMDVQMPKLD 80 Query: 62 GLEATRKI---ARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSV 118 GLEATR++ A + K+I+LT + ++AGA+G+L K A+P++++ ++R V Sbjct: 81 GLEATRRLLGPAGADHPTKVIILTTFDREDYLFEALRAGASGFLLKNASPEDLIESVRIV 140 Query: 119 YSGQRYIASDIAQQMALSQIEPE---KTESPFASLSERELQIMLMITKGQKVNEISEQLN 175 G ++ ++ +++ P T P + L++RE +++ ++ KG EI+ QL Sbjct: 141 ARGDALLSPEVTRRVIARFSAPAVTGPTRRP-SELTDREFEVLSLLAKGASNAEIARQLV 199 Query: 176 LSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 L TV ++ R+ +KLN+ A +G+ Sbjct: 200 LGETTVKTHVSRILTKLNLRDRTHAVVFAYENGIVT 235 >UniRef50_A8UHM3 Two-component response regulator n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UHM3_9FLAO Length = 217 Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 121/209 (57%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I + + DDHELV GI+ +L+D K ++VV S + +K +V+V+L+D+++P Sbjct: 9 IEIAITDDHELVLEGIKSMLQDTKEVEVVSTFSNAKQTLKGLDDLSVEVLLLDINLPDTN 68 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++ ++++ + D+KII LT H + ++++ G GYL K E++ A+++V SG Sbjct: 69 GIDLSKQLLKKFPDLKIIALTSHDDASFAKRMLKNGVHGYLLKNTDKIELLRALKTVLSG 128 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + Y+ D++ ++ + +P+ L+ RE ++++ I++ +ISE+L +SPKTV Sbjct: 129 EIYLQKDMSDRLLYQRSKPKAKNGLNIKLTRREHEVLIAISEELTTQQISEKLFISPKTV 188 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 ++R + K V + +AI +GL Sbjct: 189 ETHRSNIILKFGAKNSVGIIKMAIENGLL 217 >UniRef50_A4CPM8 Regulatory protein, LuxR:Response regulator receiver n=4 Tax=Flavobacteria RepID=A4CPM8_9FLAO Length = 226 Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 67/207 (32%), Positives = 120/207 (57%), Gaps = 7/207 (3%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MINVL+ D+H +VR GI+++LE+ I+V+G+ + DV++++M +P I Sbjct: 18 MINVLIADNHPVVRLGIKQVLENDGDIQVLGDVGTTTALFQMLSKATPDVLILEMDIPEI 77 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+ RK+ +V++++ + +E+ ++AGA GYLSK A + A+ V Sbjct: 78 NGIATLRKMKDEYPEVQVLIYSGQSEDVYALSTIRAGARGYLSKSAELSYLADAVHKVSD 137 Query: 121 GQRYIASDIAQQMALSQIEPEKTESP---FASLSERELQIMLMITKGQKVNEISEQLNLS 177 G +I +++AQ++A E T+ P F LS RE++++ M+ G++ E++ LNL+ Sbjct: 138 GGMFITNELAQRLAFD----EGTQKPRRFFRKLSTREVEVLKMLASGKRNKEVALGLNLN 193 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLA 204 KTV++Y+ R+ KLN+ V+L A Sbjct: 194 EKTVSTYKARLMKKLNVDNMVDLLQQA 220 >UniRef50_C1A9U5 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9U5_GEMAT Length = 223 Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 69/213 (32%), Positives = 123/213 (57%), Gaps = 5/213 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+ DDH LVR G+R +L+ GI+VVGEAS G AV + DVV++D++MP Sbjct: 11 IRVLIADDHALVREGLRYVLDADPGIEVVGEASNGRTAVDLALQHVPDVVVLDITMPEES 70 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GL+A ++ + D ++++L++H + + M+ G GYL K +A +E+ +AIR+V++G Sbjct: 71 GLKAAARLREALPDTRVLLLSMHDQGEYVREGMRIGTHGYLLKDSAGEELRAAIRAVHAG 130 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFAS---LSERELQIMLMITKGQKVNEISEQLNLSP 178 + + + +++ +++ E +P A L+ RE ++ + +G I+ +L +S Sbjct: 131 GTFFSPAVVRRLTSTEVVSEG--APAAQLDLLTPRERDVLAGVARGLTNKAIAAELGISR 188 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 +TV ++R + KL IH LT A+ G+ Sbjct: 189 RTVEAHRESLMRKLQIHSVAGLTRFALETGIIT 221 >UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QY5_SYMTH Length = 218 Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 127/212 (59%), Gaps = 4/212 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + VL+VDDH ++R G+ +L + ++V+GEAS G++A++ D+VLMD++MP + Sbjct: 1 MKVLIVDDHLMLRKGVLSVLSNTD-LEVIGEASNGQEALELVPKLKPDLVLMDINMPVLD 59 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATRK+ + D+K+++LTV + + ++AGA GYL K P+E+VS++R+ SG Sbjct: 60 GVEATRKLKQMYPDLKVVILTVSEIDKDLFEAIKAGADGYLLKNLGPEELVSSLRAAISG 119 Query: 122 QRYIASDIAQQMALSQIEPEKT---ESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 + I+S +A +M +P + P LS RE++++ + + G EI+ +L ++ Sbjct: 120 EAPISSVMAAKMLKEFRQPRANTTGKQPGQQLSPREIEVLRLASTGLTYKEIAAKLYVAE 179 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 TV ++ + KL++ E AIR GL Sbjct: 180 STVKNHMRHILEKLHLRNRSEAVGYAIRTGLA 211 >UniRef50_A9B192 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B192_HERA2 Length = 219 Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 70/215 (32%), Positives = 122/215 (56%), Gaps = 6/215 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +L+VDDH + R G+R +LE ++VVG G DA + VDV L+D+S+P + Sbjct: 1 MRILIVDDHPVFREGVRALLETHDEMEVVGVLGHGRDAAVVAKDQFVDVALLDVSLPDMP 60 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G E R I ++ +++MLT + N + + + AGAAGY+ K P ++S I +V G Sbjct: 61 GYEVCRSIVEASPRTRVLMLTANDTNDVIRQSLAAGAAGYVLKTEDPSRLISHISAVAQG 120 Query: 122 QRYIASDIAQQMALSQIE-PE-----KTESPFASLSERELQIMLMITKGQKVNEISEQLN 175 + +A IAQ++ +E P+ KT +L+ERE Q+ + +G++ ++I++QL Sbjct: 121 ETVLAGPIAQKVVRQLLEGPQPTVSTKTNDALNALTERERQVFFLAAEGRRNSDIAQQLI 180 Query: 176 LSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 LS +T+ ++ ++SKL + EL A++ L Sbjct: 181 LSEETIKTHLRNIYSKLGLGNKAELRLFAVQARLA 215 >UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0H3_THERP Length = 245 Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 73/224 (32%), Positives = 126/224 (56%), Gaps = 14/224 (6%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 IN+L+VDDH L R+GIR LE +VGEA+ G +A++ + DV+L+D+S+PG+ Sbjct: 4 INILIVDDHPLFRSGIRWSLEQNPQFVIVGEAADGSEALRLADELSPDVILVDLSLPGMN 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLE R + R +I+LT+H ++ ++AGA+ Y +K P++++ I V G Sbjct: 64 GLEVARALKRRQPQAGVIILTMHQDDEQLFNAIRAGASAYCTKDIEPEQLIDVITRVARG 123 Query: 122 QR----------YIASDIAQQM-ALSQIEPEKTESPFAS-LSERELQIMLMITKGQKVNE 169 + ++AS + Q LS++ ++T S F S L+ RE++I+ + +G E Sbjct: 124 EYLINEMVLSRPFVASRVLDQFRELSRL--DRTSSGFFSPLTPREIEILDCVARGYSNKE 181 Query: 170 ISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 I++ LN+S +TV ++ + KL ++ + A+RHG E Sbjct: 182 IAQALNISDQTVKNHITSILRKLAVNDRTQAVIYALRHGWIKLE 225 >UniRef50_B9JLI1 Two-component response regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JLI1_AGRRK Length = 219 Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 68/217 (31%), Positives = 120/217 (55%), Gaps = 14/217 (6%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 ++ DDH +VR G++ ++ + + +V EA+ G+ + R+ D++++D+ MPG+ Sbjct: 5 FTAIIADDHAIVREGLKLLISAMTNVSIVAEAANGDTLLDLVRSTRADLLILDLGMPGVA 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++ I +KI++LT + E + AGA GYL+K P+E+ +AI +V SG Sbjct: 65 GIQFISDIRALAPRMKILVLTANIEPRTVRAALDAGANGYLTKDGDPEELDTAIDAVKSG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTE---------SPFASLSERELQIMLMITKGQKVNEISE 172 + Y+A I +A +PE+ SP L+ RE Q++L+ +GQ +++E Sbjct: 125 KTYLAKSIRFAVA----DPERLGKMPVTGEIVSPI-PLTLRERQVLLLSAQGQTSRQMAE 179 Query: 173 QLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 +L +SP T +R + KLN+H E+T A+R GL Sbjct: 180 RLGISPLTARKHRENLMRKLNLHSTAEVTAYAVRLGL 216 >UniRef50_A1VB77 Two component transcriptional regulator, LuxR family n=5 Tax=Desulfovibrio RepID=A1VB77_DESVV Length = 216 Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 71/211 (33%), Positives = 123/211 (58%), Gaps = 2/211 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V++V+D ++VR GI+ +L+ +VGEAS G +A++ +A D+VLMD+++P + Sbjct: 3 ITVVIVEDLDIVREGIKALLDANGEFIIVGEASDGIEALRIVEKHAPDIVLMDLTLPVME 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G EA R+I R K++ LT H ++ L + + AGA GYL K A+ + A+++V +G Sbjct: 63 GAEAIREIKRRRETTKVLALTAHKKDSLIYRTLSAGADGYLLKNASRDILFQAMQTVLAG 122 Query: 122 QRYIASDIAQQMALSQIEPEKTE--SPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 +RYI+ +I+ + + + + S LS+RE Q++ ++ +G ++E+L +S K Sbjct: 123 RRYISPEISDLLIDDFLRHGRRDEASMLDLLSDREKQVLKLVAEGHGNKAVAEKLCISHK 182 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 TV ++ + KL EL AI HGL Sbjct: 183 TVEKHKANLKRKLGTASTAELVTFAIEHGLT 213 >UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria RepID=Q3Z7M1_DEHE1 Length = 232 Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 64/218 (29%), Positives = 128/218 (58%), Gaps = 3/218 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI+++L DDH++VR G++ +LE +VVGEAS G +AV + V++ D+ M G+ Sbjct: 1 MISIVLADDHQIVRHGLKALLEAEADFEVVGEASDGIEAVNLVESLQPGVLVTDLMMGGM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+E T ++ + + +++L+++ + ++AGA Y+ K + +E+V ++R Sbjct: 61 SGIEVTYQVVKRSPKTAVVILSMYGNEAYVHEALRAGARAYVLKDSTSEELVRSVREAVQ 120 Query: 121 GQRYIASDIAQQMALSQIE--PEKTE-SPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 G RY++S ++++ + +E E T P+ +L+ RE +++ ++ +G EI+E+L +S Sbjct: 121 GHRYLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAERLFIS 180 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETL 215 P+TV +R M KL++ +L A++ G+ E + Sbjct: 181 PRTVEVHRANMMRKLDLRNQTQLLRYALQRGIIPPENM 218 >UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding domain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746AEC Length = 222 Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 114/207 (55%), Gaps = 2/207 (0%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 VLLVDDH +V G R +L ++V A +A+ D+V+ D+++ G G Sbjct: 11 RVLLVDDHRMVLEGYRFMLNAQPDLEVCATAVSAAEALGLLEQVRPDLVVTDLTLGGRSG 70 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 L+ + + + KI++ ++H E + +QAGA GY+ K A ++A+R+V +GQ Sbjct: 71 LDLIKDVMALFPETKILVCSMHDEMLWANRTLQAGARGYVMKDADGPTFLTAVRTVLAGQ 130 Query: 123 RYIASDIAQQM--ALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 RY++S +A + + Q +P + SP LS+RE ++ + +G+ EI+ QLNLSPKT Sbjct: 131 RYMSSRLAASVLESFGQSKPRGSSSPIEKLSDREFEVFRLFGEGKTAKEIAAQLNLSPKT 190 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRH 207 V+ +R + KL E+ A+RH Sbjct: 191 VSVHRDHIKEKLGFSTSAEMIRQAVRH 217 >UniRef50_Q11YW8 Two component transcriptional regulator, LuxR family n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YW8_CYTH3 Length = 215 Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 61/201 (30%), Positives = 120/201 (59%), Gaps = 2/201 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I++++ DDH L+R GI+ +L+ + +VVGEA+ G++ +++ T ++V++D++MP Sbjct: 5 ISIIIADDHTLIRDGIKSLLQSVDEFEVVGEATDGDELIQFIDTLDPEIVVLDITMPKKS 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+E ++ + VK I+L++H K +Q+GA YL K +E++ A+++V +G Sbjct: 65 GIEVITEVKKYNNRVKFIVLSMHDNPEYVLKSVQSGALSYLLKNTDHEEIIKAVKAVSAG 124 Query: 122 QRYIASDIAQQMALSQIEPE--KTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 Q+Y + DI + PE K +L++REL+++ ++ G I+++L +S + Sbjct: 125 QKYFSPDIYSIILNGLANPELVKASQIAETLTKRELEVLKEVSMGLSTKLIADKLFISVR 184 Query: 180 TVNSYRYRMFSKLNIHGDVEL 200 TV ++R + KL++H EL Sbjct: 185 TVETHRINLMKKLDVHNSAEL 205 >UniRef50_Q1LE49 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderiaceae RepID=Q1LE49_RALME Length = 264 Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 122/210 (58%), Gaps = 3/210 (1%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 +VL+V+DH L+RAG+R +L G V GEA G +A + + D++LMD+S+PG+ G Sbjct: 6 SVLIVEDHNLLRAGLRSMLSAQMGYHVAGEARDGREACQLAISLCPDLILMDLSLPGMNG 65 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 ++A I R + ++II L+VH + + ++AG GY+ K + ++V+A+R V G+ Sbjct: 66 IDAIAAIKRRSPGIRIIALSVHQNDEYVREALRAGVDGYVLKDTSFDDLVTAMRVVLLGK 125 Query: 123 RYIASDIAQQMALSQI---EPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 ++++ ++ + S + E ++ + L+ RE ++ ++ +G+ ++ +NLSPK Sbjct: 126 KHLSPELYGNLVESYVSGHEMSTAKTGWDLLTARERSVLKLVAEGRSNRQVGIYMNLSPK 185 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 T+ YR + KL I EL +AI GL Sbjct: 186 TIEKYRASLMRKLGITNLTELVLIAISMGL 215 >UniRef50_D2QF32 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QF32_9SPHI Length = 223 Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 70/217 (32%), Positives = 120/217 (55%), Gaps = 13/217 (5%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +L+ DDH +VR GIR +LED I++VGEAS G++A+ + DV+L+D++MP + Sbjct: 3 IRILIADDHSVVRKGIRMLLEDETDIQIVGEASDGDEAIDLLASIGTDVLLLDITMPRMS 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA + I++ V+ +M ++H+ K +Q GAAGYL K +E++ A+R+V G Sbjct: 63 GIEALKVISKKYPAVRTLMFSMHSNPDYIVKAVQHGAAGYLLKDTGLEEMLRAVRTVVDG 122 Query: 122 QRYIASDIAQQMALSQI--------EPEK-----TESPFASLSERELQIMLMITKGQKVN 168 Y + + + S + EP K ++S + ++ RE Q++ + G Sbjct: 123 DLYYPPNASSVIIRSLVLPNANLTKEPAKAGGSVSKSIWNRITSREGQVLTCLIDGMSSP 182 Query: 169 EISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAI 205 EI+E+ +SP TV + R + K + +L LA+ Sbjct: 183 EIAEKFGISPNTVANQRASIIRKAGVKNTADLIRLAL 219 >UniRef50_Q11VM8 Two-component response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VM8_CYTH3 Length = 227 Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 69/207 (33%), Positives = 119/207 (57%), Gaps = 8/207 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V + DDHE+ R G+R+++ + ++VVG AS GE+A++ + N DVV+MD+ M G+ Sbjct: 6 IKVFIADDHEIFRDGVRQLISNESDMEVVGTASSGEEALELLKDNHADVVIMDIRMSGMN 65 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLE +R I ++ ++ I+ +++ + ++ GA+GY+ K + + + IR+V +G Sbjct: 66 GLETSRAILKNDSNTHILFFSLYDRDDYVVTALEMGASGYILKDTSNKIFLKGIRAVSNG 125 Query: 122 QRYIASDIAQQMALSQIE-------PE-KTESPFASLSERELQIMLMITKGQKVNEISEQ 173 Q Y D+ + E PE + S +SLS+RE QI+ I +G+ EI+E+ Sbjct: 126 QFYFTGDVTDVLIKKYKELKDVKNTPEISSSSIQSSLSKREYQILNRIREGKTNKEIAEE 185 Query: 174 LNLSPKTVNSYRYRMFSKLNIHGDVEL 200 NLS +TV ++R + K N+ EL Sbjct: 186 YNLSVRTVETHRMNILRKFNVSNFDEL 212 >UniRef50_C7MN84 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MN84_CRYCD Length = 215 Score = 122 bits (306), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 71/214 (33%), Positives = 125/214 (58%), Gaps = 3/214 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMP-G 59 MI+V + DDH +VR G I+ ++VVGEA+ G++A V+L+D+SMP G Sbjct: 1 MIDVAIADDHAVVRQGFAFIINSQCDMRVVGEAADGKEAYDLVARVEPHVLLLDISMPPG 60 Query: 60 IGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVY 119 GL A +I+ +II+LT+ E ++ GAAGY+ K ++ + ++ AIR V Sbjct: 61 ENGLIACERISCDFPSTRIIILTMFEETDYLFYTLRGGAAGYVLKNSSTEVLLGAIRKVA 120 Query: 120 SGQRYIASDIAQQMA--LSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 +G+ YI ++AQ ++ L ++P+ LS RE +I ++ +G E +++L +S Sbjct: 121 TGETYIEPNMAQALSGKLHGQSGVAEKNPYHELSSREFEIFSLLAQGYTNKEAADKLFIS 180 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 KTV ++R ++++KL ++ EL HLA+++ L + Sbjct: 181 VKTVETHRSKIYAKLGVNSRAELVHLALKYHLLD 214 >UniRef50_B6WQV4 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WQV4_9DELT Length = 222 Score = 122 bits (306), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 73/213 (34%), Positives = 122/213 (57%), Gaps = 7/213 (3%) Query: 4 VLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGL 63 +LLVDDH+L+ GIR +L ++V G A G++AV T + D+V+MD+SMPG+ G+ Sbjct: 7 ILLVDDHKLLMEGIRSLLAPHSHLRVAGMAPDGKEAVGLAATLSPDLVIMDISMPGMNGV 66 Query: 64 EATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQR 123 EA+R I + + +I++ T H + +++Q G G++ K P ++ AI +V G+ Sbjct: 67 EASRAILQIRPETRILIYTGHEDQRHLLELIQLGIMGHVCKSDPPSVLLQAIDAVRQGEV 126 Query: 124 YIA-SDIAQQMAL------SQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNL 176 +++ +D MA ++ P + LS RE +I ++ G V +I + LN+ Sbjct: 127 FLSCADPGGCMAALMRQNRQRLSPAEGGPDIGMLSPREKEIFRLLADGYSVRQIGDALNI 186 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 SPKTV +++Y + +KL ELT +AIR GL Sbjct: 187 SPKTVETHKYSVLTKLRASSINELTKMAIRLGL 219 >UniRef50_A8LG56 Two component transcriptional regulator, LuxR family n=4 Tax=Actinomycetales RepID=A8LG56_FRASN Length = 244 Score = 122 bits (306), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 79/213 (37%), Positives = 119/213 (55%), Gaps = 2/213 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 ++VLLVDD ELVR G+R ILE I VVGEAS G V R N DVV+MD+ MP + Sbjct: 29 VSVLLVDDEELVRVGLRVILESGGEIDVVGEASDGSQVVPLIRENTPDVVIMDIRMPRVD 88 Query: 62 GLEATRKIARSTAD-VKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GL A R+I AD KI++LT + + +++GA G+L K A P E+V A+R++ S Sbjct: 89 GLAAIREILADVADPPKILVLTTFELDDYVYEALRSGANGFLLKRARPAEIVQAVRTIVS 148 Query: 121 GQRYIASDIAQQMALSQIEPEKTES-PFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 + + + + MA + E E+ A L++RE ++ +I++G NEI+ +L L + Sbjct: 149 SESLLFPEAIRYMAGKRPNREAHETMRRAVLTDREADVLRLISEGLSNNEIANRLYLGAQ 208 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 TV S+ + +KL + +A G A Sbjct: 209 TVKSHVSSVLAKLGARDRTQAVIIAYESGFVEA 241 >UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacillales RepID=C0ZDE8_BREBN Length = 214 Score = 122 bits (306), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 70/208 (33%), Positives = 121/208 (58%), Gaps = 2/208 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMP-G 59 MI VLLVDDH ++R G+R +LE IK+VGE+ G DA+ DVVLMD+S+P G Sbjct: 1 MIRVLLVDDHTMIRKGLRVLLESYSQIKIVGESHTGNDAILKANQLKPDVVLMDLSLPNG 60 Query: 60 IGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVY 119 + G A+++I +S VKI++LT+H E + + GA GY+ K + + + AI VY Sbjct: 61 LDGFTASKEIRKSNPLVKIVILTMHDEEIFVQEAITVGAHGYILKNSHGELLFQAIVEVY 120 Query: 120 SGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 G+ + + ++Q++ + + P + L+ RE +++ +I G E++++L +S K Sbjct: 121 RGKCFYKTSVSQEIINLWLRSDAKTLP-SVLTLREKELVRLIVLGYSNKEMADKLLISVK 179 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRH 207 TV +++ + KL + +L AI++ Sbjct: 180 TVENHKTNIMQKLGLDSKHQLIQYAIKN 207 >UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9H4_DESAH Length = 217 Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 121/212 (57%), Gaps = 2/212 (0%) Query: 4 VLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGL 63 V++ DDH ++R GI +++E +G+ VVGE G + + T D+V++D+SMP + G+ Sbjct: 6 VVIADDHAMLRRGICQVIETQEGVSVVGEVGDGIELLNLLSTQPADLVILDISMPKMSGI 65 Query: 64 EATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQR 123 EA +KI + +KI+ L++H N AGA GYL K E+++A+ ++ G+ Sbjct: 66 EAAKKIRATYPGIKILFLSMHKRNEYLYHAFSAGANGYLLKEDTDTEILTAMDTILEGKA 125 Query: 124 YIASDIAQQMA--LSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 +++S + M L+ + + P +LS RE +++ ++ +G+ +I++ L +S +TV Sbjct: 126 FLSSIFTKDMPDILTDMVKNGSSFPGGTLSPREEEVLTLLAEGKSNKKIADILCISTRTV 185 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 +R + +L++ +L AIRHG + E Sbjct: 186 EHHRASIMKRLDLRTLADLIKYAIRHGYTSDE 217 >UniRef50_Q1YTG7 Regulatory protein, LuxR:Response regulator receiver n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTG7_9GAMM Length = 214 Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 69/214 (32%), Positives = 127/214 (59%), Gaps = 5/214 (2%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 M ++LLVDDH +VR G++++L + G V+GEA+ +A++ R +V++D+ +PG Sbjct: 1 MSSILLVDDHAVVRNGLKQMLIEHLGSVVLGEANDAIEAMQQVRKQDWGLVVLDIRLPGR 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G++ ++I + +++L+ + E+ +++QAGAAGY+SK + E++ A+++ + Sbjct: 61 SGVDVLKQIKSEKPHLPVLILSSYPESQYAVRLIQAGAAGYISKDSEETEIIKAVKTAAA 120 Query: 121 GQRYI----ASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNL 176 G RYI +A M+ S + S + SLS+RE QI L + G++ +I+E+L + Sbjct: 121 GGRYINEIVGGLLANTMSRSFSNADDL-SLYESLSDREYQIFLELASGKRAKDIAEKLQV 179 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 S KTV ++R R+ K+ + EL A + GL Sbjct: 180 SAKTVATHRSRLMQKMGFSTNAELILYANKSGLL 213 >UniRef50_C6W2Z0 Two component transcriptional regulator, LuxR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W2Z0_DYAFD Length = 205 Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 62/208 (29%), Positives = 116/208 (55%), Gaps = 6/208 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +L+VDDH LV G++ +L D +G++VVG A+ +A+ + + N VD+ +D+++P I Sbjct: 3 VRILIVDDHPLVLEGLKSLLADAEGVQVVGTATNAIEAIAFLKGNEVDIAFLDINLPDIS 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++ +K+ +VK + L+ E ++++Q GA+GYL K + ++++ AI V +G Sbjct: 63 GIDLCKKVKDQFPEVKTLALSTFNERAYVSRMIQNGASGYLIKSSGKEDILEAIAQVQAG 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 ++ + Q+ P L+ RE +++++I +G +I+EQL +S TV Sbjct: 123 GYFM------NVQFDQVTPATAPKTVPFLTRREKEVLVLIAEGLTNPQIAEQLFISVTTV 176 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 NS+R + K + L LA GL Sbjct: 177 NSHRQNLLIKFEVSNTASLIKLAAGLGL 204 >UniRef50_C6E3E1 Two component transcriptional regulator, LuxR family n=4 Tax=Deltaproteobacteria RepID=C6E3E1_GEOSM Length = 223 Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 66/221 (29%), Positives = 121/221 (54%), Gaps = 13/221 (5%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 VL+VDDH L R G++ ++E + VGEA CG +A+ + D+V MD+S+P + G Sbjct: 5 RVLIVDDHPLFREGVKSLVERSANYQAVGEAGCGAEALALAQELKPDLVTMDVSLPDMSG 64 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 +E R I + +I+ML+++ + A+ +AGA GY+ K ++ ++ G+ Sbjct: 65 IEVVRGILDLAPETRILMLSMYPKFDYVAEAFKAGAKGYVVKETTTARLIQGFDALCRGE 124 Query: 123 RYIASDIAQQMA--LSQ-------IEPEKTESPFASLSERELQIMLMITKGQKVNEISEQ 173 ++ ++Q + L+Q ++ EK + L+ RE Q++ ++ +G +I+ Sbjct: 125 FFVDGQVSQDLVAKLAQGAARDQALQDEK----YGLLTPREQQVLRLVAEGSSTRQIAAA 180 Query: 174 LNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 + LSPKTV ++R + KL++H +EL A R GL + E+ Sbjct: 181 IELSPKTVENHRTNLMKKLDVHSKMELVKYAARLGLIDVES 221 >UniRef50_C1TQ52 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQ52_9BACT Length = 214 Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 65/210 (30%), Positives = 123/210 (58%), Gaps = 1/210 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +LL DDH+++R G++ +L + ++VV EA GE+A+ DV +MD+ MP + Sbjct: 3 IKILLADDHKILREGVKALLNRQEDMEVVAEAGNGEEALSIAGEIRPDVTVMDVMMPQMD 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR+I + +++ L+++ + +++++ GA G+L K A E+V A+R V G Sbjct: 63 GIEATRRIVEDGSS-RVVALSMYADRSFVSEMLKVGALGFLLKDCASTELVEAVRKVMDG 121 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + Y+ I+ +A + L+ RE +I++++ +G E++E+L+LS KTV Sbjct: 122 EIYLGPSISHIVAKLYVSSLHDPDDIEPLTPREKEILMLLAEGNTNREVAERLHLSIKTV 181 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++R + +KL + +L AIR+G+ + Sbjct: 182 GTHRQHIMNKLKLKNLADLVKYAIRNGMIS 211 >UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFI8_DESAH Length = 220 Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 121/210 (57%), Gaps = 3/210 (1%) Query: 4 VLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGL 63 +L+ DDH +VR G+R +LE KG++V A G AV D+V+MD++MP + G Sbjct: 5 ILIADDHAIVREGLRVLLER-KGLEVPWMAENGRQAVCLAVKFKPDIVIMDITMPNMNGS 63 Query: 64 EATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQR 123 AT KI ++ ++I L++H + ++ AGA Y+ K +A E+ AI++V G+ Sbjct: 64 IATEKIMQALPRTRVIALSMHADRRYIDRMFNAGAIAYVLKDSAFAELFDAIQAVGRGKY 123 Query: 124 YIASDIAQQMALSQIEPEKT--ESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 YI+ IA+ +A S T + PF +S RE +++ +I +G K +I+E+L +S KTV Sbjct: 124 YISPSIAKTLADSCTSAPDTPQKCPFGRISPREREVLQLIAEGVKTRQIAERLFVSIKTV 183 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++R + +KL I LT AI+ GL + Sbjct: 184 EAHRRNIMNKLMISSVAGLTRFAIQEGLVS 213 >UniRef50_B8GUD1 Two component transcriptional regulator, LuxR family n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GUD1_THISH Length = 227 Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 74/213 (34%), Positives = 114/213 (53%), Gaps = 12/213 (5%) Query: 4 VLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGL 63 VLL+DDH L R G++ +L+ GI VG GE + R DV+L+DM MP + GL Sbjct: 5 VLLIDDHTLFREGLQELLKR-HGIDTVGAVGDGETGIDLARDLLPDVILLDMRMPAMNGL 63 Query: 64 EATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQR 123 E R++ ++ + I+MLT TE + ++ GA GYL K P ++V A+ + G+ Sbjct: 64 EVLRRLRQAGLKMPIVMLTTSTEEQDLVECLRNGAQGYLLKEMEPGDLVDALEEILQGKT 123 Query: 124 YIASDIAQQM-------ALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNL 176 +A D+AQ + + S EP SPF L+ RE +I+ ++ +GQ I+ L + Sbjct: 124 VVAPDLAQLLVRVVQGKSSSANEP----SPFDELTPREGEILALLAEGQSNKVIARNLGI 179 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 S TV + + KL +H VE LA++ GL Sbjct: 180 SDGTVKLHVKAILRKLGVHSRVEAAVLAVQQGL 212 >UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=C7QHJ1_CATAD Length = 222 Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 72/213 (33%), Positives = 122/213 (57%), Gaps = 5/213 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +L+VDDH +VR G+R + + G +VVGEAS G A+ + DVVLMD+ MP +G Sbjct: 12 LRLLIVDDHPIVRDGLRGVFDGEDGFEVVGEASDGAQALVRAAESGPDVVLMDLRMPTMG 71 Query: 62 GLEATRKIARSTADVKIIMLTVH-TENP-LPAKVMQAGAAGYLSKGAAPQEVVSAIRSVY 119 G+EA R++ V++++LT + TE+ LPA ++AGA GYL K A ++++ A+R+ Sbjct: 72 GVEAIRRLRVEQPAVRVLVLTTYDTESDVLPA--IEAGATGYLLKDAPREDLIRAVRAAA 129 Query: 120 SGQRYIASDIAQQ-MALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 +GQ +A +AQ+ M Q + P +L+EREL+++ ++ G E + +L +S Sbjct: 130 AGQPVLAPTVAQRLMTRVQTPLAEPAPPGDALTERELEVLRLVASGTTNRETARKLFISE 189 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 TV ++ ++K + A + GL Sbjct: 190 ATVKTHLLHAYAKFGVRDRAAAVAEAYKRGLLK 222 >UniRef50_A1AUQ3 Two component transcriptional regulator, LuxR family n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AUQ3_PELPD Length = 212 Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 121/210 (57%), Gaps = 1/210 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKV-VGEASCGEDAVKWCRTNAVDVVLMDMSMPG 59 M +L+VDDH +VR G+ R+L+DI V EA G + + ++VL+D+S+P Sbjct: 1 MKRILIVDDHTIVRQGVIRVLQDILEQPVEFHEACTGRQTLDMACSCEYNLVLLDISLPD 60 Query: 60 IGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVY 119 GL + + + + +IM++ H E + ++AGA+GY++KG A + AI V Sbjct: 61 QNGLNVLKALQQKHPRLPVIMVSTHPEEHYAVRALRAGASGYVNKGDAAVVLKEAIEKVL 120 Query: 120 SGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 +G+RY+ A+ +A + + + +LS+RE Q+ M+ G+ + EI+ +L+LS K Sbjct: 121 AGRRYVTPSQAELLADALCDGAEPAVLHHALSDREYQLACMMAAGKTLTEIARELSLSVK 180 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 TV++YR R+ KL++ ++ + I++GL Sbjct: 181 TVSTYRTRVLEKLHLRSTADIINYCIQNGL 210 >UniRef50_A2SD01 Two-component response regulator n=3 Tax=Betaproteobacteria RepID=A2SD01_METPP Length = 215 Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 66/209 (31%), Positives = 121/209 (57%), Gaps = 2/209 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 +I+VLL+DDH +VRAG R++++ + VV + A + R +DV ++D+S+ Sbjct: 6 LIHVLLLDDHAVVRAGYRQLIDAEPDMCVVAACATSAQACEQLRLQQIDVAVVDLSLKDD 65 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GL+A +++ A ++I++ T+H + + ++AGA GYL+K + PQ ++ A+R V Sbjct: 66 SGLQAIQRLRARLASLRILVFTMHAQQSYALQALRAGALGYLTKDSDPQAMLDAVRQVAQ 125 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+R +S++ + M L +E E+ P L+ RE ++ + +G I+E ++L KT Sbjct: 126 GRRVFSSELVEAM-LDPLEVERG-GPLRQLTPREFDVLRLAAQGLATRAIAEAMHLGDKT 183 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 V +Y + KL D++L LA ++GL Sbjct: 184 VLNYMSLIRQKLGAANDLQLLRLAAQNGL 212 >UniRef50_B1ZKP8 Two component transcriptional regulator, LuxR family n=4 Tax=Alphaproteobacteria RepID=B1ZKP8_METPB Length = 219 Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 121/212 (57%), Gaps = 2/212 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 M +LLVDDH +VR G RR+LE G VV EA A + + A D+V++D+S+PG Sbjct: 1 MPTLLLVDDHPVVREGYRRLLERQPGFTVVAEAETAAQAYRLYKAQAPDLVILDLSLPGP 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EA R I + A +I++ ++ T + + AGA+GY+SK + P+++++A+ V Sbjct: 61 SGIEAIRHIRQWDAAARILVFSMRTGAAVARQAFAAGASGYVSKASPPRDLLTAVAGVLR 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+R ++ DIA +A++Q E + LS RE++I+ M G + ++E L LS KT Sbjct: 121 GERAMSPDIA--LAIAQDEVSGGRTALDDLSPREIEILGMTAAGATASAVAEALCLSLKT 178 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 V + + +KL D L +A+ GL A Sbjct: 179 VQNNLSLIRAKLGARTDAHLVWIAVGAGLVAA 210 >UniRef50_C6W645 Two component transcriptional regulator, LuxR family n=2 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W645_DYAFD Length = 209 Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 118/209 (56%), Gaps = 1/209 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 M+ +L+ DDH LVR G++ +L + + E+ GE + D++L+D++MP Sbjct: 1 MMKILIADDHSLVRYGLKLVLTNYFSESQIDESWDGESVRAQFTAHRYDLLLLDLNMPDT 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 E + I ++ KI++++++ E+ + +Q GA GYL K ++P+E+ A+ ++ S Sbjct: 61 DSTELLQWIRDFYSETKILVVSMNDESVFGKRSLQQGAHGYLEKDSSPEELARAVTTIMS 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+RY ++++A + ++ K+ +PF L+ RE Q+ + K V +ISE L + + Sbjct: 121 GKRYASTNLA-NILINDTLTGKSANPFDRLTAREFQVATYLAKDYSVTQISEILQVQYTS 179 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 VN+++ R+F KLNI L LA + L Sbjct: 180 VNTFKRRIFKKLNIPNKAALVRLADAYNL 208 >UniRef50_Q1IT25 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IT25_ACIBL Length = 227 Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 70/214 (32%), Positives = 120/214 (56%), Gaps = 5/214 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +L+ DDH + R G+RR+LE V+GEA+ G +AV+ R DV+L+D++MP + Sbjct: 10 VRILIADDHTIFRDGLRRLLESEPEFDVIGEAADGGEAVQQARRLGPDVLLLDLAMPRVP 69 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GL+A R++ + KII+LT E + +QAGA G + K +A Q ++ IRSV +G Sbjct: 70 GLDALRELTTDDSSTKIIILTAAIEKAQIVQALQAGAKGIILKESATQLLLKGIRSVMAG 129 Query: 122 QRYIA----SDIAQQMALSQIEPE-KTESPFASLSERELQIMLMITKGQKVNEISEQLNL 176 Q ++ +DI + + + + +++ L++RE++I+ I G EI+++ NL Sbjct: 130 QYWVGRESVNDIVEYLKSTAAGAQADSQAKNFGLTKREMEILGTIVAGFTNKEIAKKFNL 189 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 S TV + +F K+ + +EL AI L Sbjct: 190 SEDTVKHHLTNIFDKVGVSSRLELALFAINQRLA 223 >UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7D2_9BACL Length = 227 Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 126/212 (59%), Gaps = 7/212 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAV----KWCRTNAVDVVLMDMSM 57 I V++VDDH++VR G++ L G +V+ EA G +AV + R D++LMD+ M Sbjct: 13 IKVMIVDDHDMVRMGLKTYLMQDPGFEVIAEAGDGREAVELLERGLREGQPDIILMDLMM 72 Query: 58 PGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRS 117 PG+ G EAT+++ D+KI++LT E+ L + ++AGA Y+ K + +E++ A++ Sbjct: 73 PGMNGAEATKEVRSRFPDMKIVILTSFLEDDLVVQAVEAGAVSYVLKTVSAEELIYALQG 132 Query: 118 VYSGQRYIASDIAQQMALSQIEPEKT-ESPFASLSERELQIMLMITKGQKVNEISEQLNL 176 Y G + ++AQ AL++ ++T + + ++ERE +++L+I +G+ +I+E+L++ Sbjct: 133 AYRGMPVMTGEVAQ--ALTRGLRQRTVQGDDSGMTEREKEVLLLIAEGKSNKDIAEELHI 190 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHG 208 S KTV ++ + K + +L A R G Sbjct: 191 SIKTVKTHVSNLLMKCELEDRTQLAIYAHRQG 222 >UniRef50_A0NNP3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NNP3_9RHOB Length = 205 Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 71/207 (34%), Positives = 120/207 (57%), Gaps = 2/207 (0%) Query: 5 LLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGLE 64 +L DDHELVR GIR L+ + ++VVGEA+ G +A+ DV+LMD+SMP + GLE Sbjct: 1 MLADDHELVRDGIRARLQKVADLEVVGEATNGREALTLAHDLRPDVLLMDVSMPVMNGLE 60 Query: 65 ATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQRY 124 A ++ + ++ +++L+V+ V+QAGA GY+ K + E+++AI SV SG Y Sbjct: 61 AATQMRKLLPEIAVLILSVYDNPEYVRGVVQAGARGYILKDISAAEMITAITSVASGGYY 120 Query: 125 IASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVNSY 184 +S + + + E P+ L++RE Q++ I +GQ E++++L +S +TV S+ Sbjct: 121 FSSAVGPTLVGAGTS-APVEDPYG-LTDRERQVLTAIARGQPNKEVAKELGISVRTVESH 178 Query: 185 RYRMFSKLNIHGDVELTHLAIRHGLCN 211 R + K+ +L +A GL + Sbjct: 179 RLNLREKVGNKNAAQLYKVAQDLGLLD 205 >UniRef50_Q1AST2 Two component transcriptional regulator, LuxR family n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AST2_RUBXD Length = 232 Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 73/223 (32%), Positives = 126/223 (56%), Gaps = 17/223 (7%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +++VDDH+L+RAG R +LE +VVGEAS G +A++ CR DVV+MD++MPG+ Sbjct: 11 VRLIVVDDHDLIRAGFRLVLEQEPDFEVVGEASSGREAIELCRRLRPDVVVMDLAMPGVD 70 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLEATR+I V ++++T + + ++AGAAGY+ K + V+SA+R + SG Sbjct: 71 GLEATRRIKEEHPQVAVLVVTALEDPEYMLEALKAGAAGYVLKSSPLPRVISALRRLLSG 130 Query: 122 Q----RYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 + + +A+ + Q +A + P L+ RE ++++++ +G+ EI+ +L +S Sbjct: 131 ESPLNQELAARLIQDLA-RRPGGGGNPPPAEELTAREREVLVLMARGRTNPEIARELVIS 189 Query: 178 PKTVNSYRYRMFSKLNIH------------GDVELTHLAIRHG 208 T S+ + KL + G +E +HL R G Sbjct: 190 RGTAKSHVQNIIRKLGVSDRTQAVARAFELGLIEPSHLKEREG 232 >UniRef50_C7LQH4 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LQH4_DESBD Length = 222 Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 123/212 (58%), Gaps = 5/212 (2%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 +L++DDH L R G+R L+ + VVGEA + ++ +T A D+ ++D+S+P G Sbjct: 6 RILIIDDHPLYRDGLRARLDTRPDLCVVGEAGTCAEGLRLTQTLAPDLAVIDISLPDGSG 65 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 +E TR+I + D+ ++++++H + A QAGA+GY+SK + + ++ AI +V SG Sbjct: 66 IELTREIRLARPDLPVLIVSMHAKLDFIAAAFQAGASGYMSKESGGEGILQAIETVLSGG 125 Query: 123 RYIASDIAQQMA--LSQIEPEKT---ESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 +Y+ ++ + LS I K ++ + SLS RE Q+M ++ +G EI+ +L +S Sbjct: 126 QYLDGSLSPSVLRRLSDISGRKAKTVDASYGSLSLREQQVMRLLAEGLTPEEIAAKLFVS 185 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 KTV ++RY + +KL I V A R GL Sbjct: 186 RKTVLNHRYAIMTKLGIKSPVAFVRHAARLGL 217 >UniRef50_C1ZGK9 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZGK9_PLALI Length = 217 Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 69/213 (32%), Positives = 121/213 (56%), Gaps = 4/213 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V L++DHELVR G++ ++E K ++VVGEA+ G + +K DVV++D+S+P + Sbjct: 3 IQVALIEDHELVRTGLKLLIERQKDLQVVGEAADGAEGLKIIARTLPDVVVLDLSIPHLN 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G E ++ K++++T + + + GAAG+L+K +A E++ AIR + +G Sbjct: 63 GFELLEQLQHQKRPPKVLVVTANEDLDSLQRSWNLGAAGHLAKRSAADELIVAIRKIAAG 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFA---SLSERELQIMLMITKGQKVNEISEQLNLSP 178 ++ S + A+ + +T SLSERE +++ +I G EI+ +L++S Sbjct: 123 EKVFPSK-EESKAVKTLGFNETSGRLTGAESLSERETEVLKLIAAGHMAKEIAAKLDISL 181 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 KTV +Y+ R KL++ G EL A++ G N Sbjct: 182 KTVETYKSRGMQKLSLRGRTELVRFAMKMGWLN 214 >UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FM25_SORC5 Length = 233 Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 120/212 (56%), Gaps = 1/212 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 +++ L+DDH +VR G R L D + VVG+A DA++ + DVVL+D+++P Sbjct: 22 LHIYLIDDHPVVREGFARALSDEPDMVVVGQAGTAADALRETASCKPDVVLVDLNIPDRD 81 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+E + K+++L+ + + A+ ++AGA GYL K + +EV+ IR + +G Sbjct: 82 GIELLGALRAQLPQAKLLVLSGYDDEFRVAEALRAGAQGYLVKTSKLEEVIEGIRRIATG 141 Query: 122 QRYIASDIAQQMALSQIEPEKTES-PFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 ++S IA + + +P S +L+ RE Q++ ++ G E + +L +SPKT Sbjct: 142 GAPLSSSIAGAVVRAMRKPASEGSGGLDALTPRERQVLRLLAAGVSTRETAARLTISPKT 201 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 V ++R R+++KL VELT +A+R GL A Sbjct: 202 VETHRVRIYAKLGCKSAVELTRIAVRTGLIEA 233 >UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridium RepID=C5RGJ7_CLOCL Length = 220 Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 116/219 (52%), Gaps = 10/219 (4%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MINV++ DD ++VR GI+ IL I V+GEA GE+ + + DV+LMD+ MP I Sbjct: 1 MINVIIADDQKIVREGIKMILSLYDEINVIGEAENGEELINLLQNFMADVILMDVRMPII 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EAT+ I K+I+LT E+ K ++ GA GYL K + +++AIRSVY+ Sbjct: 61 DGVEATKIIKERYIHTKVIILTTFNEDEYIFKAIKNGADGYLLKDVGSEFIINAIRSVYN 120 Query: 121 GQRYIASDIAQQM--ALSQIEPEKTES--------PFASLSERELQIMLMITKGQKVNEI 170 G + ++ ++ A + I E S SL+ RE+ + ++ +G+ +I Sbjct: 121 GAMLLDPEVTVKVVKAFNSITNESKNSNEFDNINNKLNSLTPREIDVAKLVAQGKSNKDI 180 Query: 171 SEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 L L+ TV +Y R+ KL ++ EL + G+ Sbjct: 181 CRSLFLTEGTVKNYVTRILGKLELNSRTELAVFINQAGI 219 >UniRef50_B2G7N1 Two component response regulator n=7 Tax=Lactobacillus RepID=B2G7N1_LACRJ Length = 217 Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 72/216 (33%), Positives = 118/216 (54%), Gaps = 5/216 (2%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMP-G 59 M NVL+ DDH +VR+GI +++ VV + G D +D+++MD+SMP G Sbjct: 1 MYNVLVADDHAIVRSGISYLVDLQPNFTVVDGTASGTDTYIRVEQGGIDILIMDLSMPPG 60 Query: 60 IGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVY 119 GL TR+I VKII+L++H E K M GA Y+ K + E+V+ ++ V Sbjct: 61 ENGLITTRRIHDKFPKVKIIILSMHEEQEYINKAMANGAMSYILKSSPDSEIVNGLKHVI 120 Query: 120 SGQRYI-ASDIAQQMALSQIEPEKT---ESPFASLSERELQIMLMITKGQKVNEISEQLN 175 +G++Y+ A+ I + + +I + LS+RE ++ +I G EIS+++ Sbjct: 121 NGEKYLDANIIVSKKDIKEINASGNILKLKGYNGLSKREKEVFPLIALGYSNKEISQKMF 180 Query: 176 LSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 +S KTV +++ + KL++HG VEL AI H L + Sbjct: 181 ISTKTVEAHKANISRKLHLHGRVELVQYAIHHHLID 216 >UniRef50_A9DM99 Transcriptional regulator, LuxR family protein n=1 Tax=Kordia algicida OT-1 RepID=A9DM99_9FLAO Length = 212 Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 118/207 (57%), Gaps = 3/207 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 +N+++ DDH++V G++ +L IKVVGEAS GE+A+K N V++ ++D+SMP + Sbjct: 7 LNIIIADDHQIVIDGLKSLLVAHPHIKVVGEASDGEEALKLIENNTVNIAVLDISMPKMN 66 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+E T+ I + +KI++LT+H + ++ + GA GY+ K +E V A+ ++ +G Sbjct: 67 GVETTKIIKKKYPYIKILILTMHDGDEFIHELFEIGADGYILKNRGKEEFVEALETINNG 126 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + YI + + + +P +S ++RE ++ +I +EIS +LN++ TV Sbjct: 127 EEYIKGKVLNVLLDAVRKP---KSKTIQFTKREKDVLRLIVGDHTTSEISAKLNIANSTV 183 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHG 208 ++R + K + + L A+ +G Sbjct: 184 ETHRRNLIEKTGVKSSLGLVRYAVENG 210 >UniRef50_C6VXG6 Two component transcriptional regulator, LuxR family n=2 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VXG6_DYAFD Length = 220 Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 71/201 (35%), Positives = 112/201 (55%), Gaps = 1/201 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 M VLLV+DH +VR G+R ++ED V EA+ + +K ++ D+V++D+ +PG Sbjct: 1 MKTVLLVEDHSIVRMGVRLLIEDFLPSVTVVEAATFSETLKHLQSRFFDLVILDIKIPGG 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 KI VKI++ + E ++AGA GYL K + +E+ AI SV + Sbjct: 61 EAFNMIGKIRDIQNKVKILVFSSQDEELYAIHYVKAGANGYLPKDTSNEELEKAITSVLA 120 Query: 121 GQRYIASDIAQQMALSQ-IEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 G YI++ I Q+ + +E E ESP LS REL+IM M+ G+ +I+ LN+ Sbjct: 121 GGTYISNVIQDQLVNNTLLERESKESPLEILSNRELEIMDMLLTGKWTKDIALDLNIKES 180 Query: 180 TVNSYRYRMFSKLNIHGDVEL 200 TV++Y+ R+F KL + +EL Sbjct: 181 TVSTYKARIFEKLEVTNILEL 201 >UniRef50_C9YCL5 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YCL5_9BURK Length = 235 Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 70/201 (34%), Positives = 119/201 (59%), Gaps = 6/201 (2%) Query: 4 VLLVDDHELVRAGIRRILEDIKGIKVVGEASCGED---AVKWCRTNA-VDVVLMDMSMPG 59 +L+ DDH +VR G++++L D + VV EA+ G + AV+ NA + VL+D++MPG Sbjct: 24 ILIGDDHRIVREGLKQVLADAADLHVVAEAASGPEVLEAVQALGGNAGLSAVLLDIAMPG 83 Query: 60 IGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVY 119 GL+ + + + + ++ML+ + E + ++ GAAGYL+KGA P ++++A+R V Sbjct: 84 RDGLDVLQVLKATWPKLPVLMLSTYPEKQYAVRCIKLGAAGYLNKGADPDDMIAAVRKVA 143 Query: 120 SGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 SG Y+++ A+ +A + + +LS RE Q+ ++T G+ V EI QL L+ Sbjct: 144 SGGVYVSAQAAEALASAVANAAHQGAE--ALSHREHQVFRLLTAGKTVGEIGAQLGLASN 201 Query: 180 TVNSYRYRMFSKLNIHGDVEL 200 TV++YR R+ K DVEL Sbjct: 202 TVSTYRQRILEKTGTKNDVEL 222 >UniRef50_A6GQJ8 Two component transcriptional regulator, LuxR family protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GQJ8_9BURK Length = 207 Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 63/208 (30%), Positives = 118/208 (56%), Gaps = 1/208 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +L+VDDH ++R G+ +IL++ G +A+ G +A++ R + D VL+D+++ Sbjct: 1 MKILIVDDHMIIRRGLVQILDEFDGQYHSEQAADGVEAMQKLRKDNFDAVLLDVALGERD 60 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G + + + + ++ML+V+ E + +++GA YL+KG +P E+ A++ +G Sbjct: 61 GFDVLKSVRSEFPKLGVVMLSVYPEAQFALRAIRSGANAYLNKGCSPAELTQALQMACAG 120 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Q Y+ A MA + + P LS RE+Q++ ++ +G+ V I++ L LS TV Sbjct: 121 QVYLTPATANLMA-NDLRKPADRPPHERLSNREMQVLRLMAQGETVQHIAQALCLSGNTV 179 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 ++YR R+F KL + V+L + HGL Sbjct: 180 STYRARVFEKLELKNLVDLVNYTKLHGL 207 >UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67MG8_SYMTH Length = 197 Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 68/193 (35%), Positives = 110/193 (56%), Gaps = 12/193 (6%) Query: 27 IKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGLEATRKIARSTADVKIIMLTVHTE 86 +++VGEA GE+AV+ + DVV+MD+S+P + G+EATR I + + ++I LT+H E Sbjct: 8 LELVGEAGRGEEAVELTKALKPDVVIMDISLPDMSGIEATRLIKEAVPETRVIGLTMHEE 67 Query: 87 NPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQRYIASDIAQQMALSQI-------- 138 P + ++AGA Y+ K +A ++V AIR+V GQ + + + + + Sbjct: 68 EPFVLEFLRAGADAYIVKRSAAADLVGAIRAVMEGQAVLDPAVTRAVVEGYVSRPGRAVG 127 Query: 139 EPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDV 198 +PE+ L+ RE +I+++I +G EI+ +L +S KTV ++R M KL IH Sbjct: 128 QPEEP----CPLTPREREILVLIAEGLTNAEIARRLYISEKTVQTHRSNMLDKLGIHDRT 183 Query: 199 ELTHLAIRHGLCN 211 EL AIR GL Sbjct: 184 ELVRYAIRQGLVE 196 >UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 Tax=Bacteria RepID=Q3Z8L1_DEHE1 Length = 224 Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 72/218 (33%), Positives = 124/218 (56%), Gaps = 3/218 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VLL DDH +VR G R +++ G+ VVGEAS G +AV+ DVV+MD++MP + Sbjct: 6 MIKVLLADDHVIVREGTRELIQRESGMMVVGEASDGVEAVEMSMKVHPDVVVMDIAMPRL 65 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EAT++I + I++LT + +++AGAA +L K +++ AIR+VY+ Sbjct: 66 NGIEATKQIKQLLPTTAILILTAYESEQYILAILEAGAASFLLKNVKGTQLLEAIRAVYA 125 Query: 121 GQRYIASDIAQQMALSQI-EPEKTE--SPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 G+ + +++ I + KTE S L++RE++++ M +G +I++QL LS Sbjct: 126 GESVLQPSTTRRVIDQLINKATKTEEVSAVNPLTDREIEVLKMAARGVSNKDIADQLYLS 185 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETL 215 +T+ ++ +F KL++ E ++ G E L Sbjct: 186 NRTIQTHLSNIFKKLSVGSRTEAILYGLKRGWFIMEDL 223 >UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C4B6_LISGR Length = 214 Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 72/215 (33%), Positives = 124/215 (57%), Gaps = 7/215 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMP-GI 60 + +L+ DDH +VR+ ++ ++ K ++V+G+A+ G +A + +N D+VLMD+SMP G Sbjct: 1 MKLLIADDHAVVRSALKFMINAQKDMEVIGDAADGTEAFLFIESNRPDIVLMDLSMPPGE 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GL T++I + + K+I+LT+H E + +QAGA GY+ K ++ + ++ AIRSV Sbjct: 61 NGLLTTKRITEAFPETKVILLTMHDEEAYITQALQAGAQGYIMKNSSEELLLDAIRSVMG 120 Query: 121 GQRYIASDIAQQMALSQIEPEK----TESPFASLSERELQIMLMITKGQKVNEISEQLNL 176 GQ I D + QIE K +E+ LS+RE +I+ +I G EI+E+L + Sbjct: 121 GQ--IIIDPVFNYSSKQIEQLKRADASENIIERLSKREKEILPLIALGYGNKEIAERLFI 178 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 S KTV ++ + KL + +L ++ L + Sbjct: 179 SAKTVEVHKSHIMKKLEMKKFSDLLRFCVKEQLID 213 >UniRef50_B0C756 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C756_ACAM1 Length = 224 Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 118/216 (54%), Gaps = 4/216 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLLVDD ++VR G++ I + I++VGEA G+ A+ +T DV+LMD++MP + Sbjct: 8 IRVLLVDDEDIVRYGLKAIAQGTPEIEIVGEAGSGKAAIAQAKTLQPDVILMDINMPQMD 67 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ AT++I+R K+++LT H E + MQ GA GYL K P++ + +I+ + G Sbjct: 68 GVTATQEISRIQPHAKVLILTTHDEAEYLVEAMQQGAVGYLLKNTPPEDFIQSIQQAHKG 127 Query: 122 QRYIASDIAQQMALSQIEPEKTE-SPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 + + Q++ P + + F ++ RE ++ ++ G EISE L+++ KT Sbjct: 128 YLQLGPGLGQKLCQLLKTPVRPQIEAFEGITPREQDVLKLVATGASNREISETLHITEKT 187 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLS 216 V ++ + S++ + T LAI ET S Sbjct: 188 VKNHVSSILSRVGVQSR---TQLAIWANSAGEETSS 220 >UniRef50_C5C7H0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=9 Tax=Bacteria RepID=C5C7H0_MICLC Length = 230 Score = 119 bits (298), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 71/222 (31%), Positives = 123/222 (55%), Gaps = 13/222 (5%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + V LVDD L+R+G+ +++ + VV EA G +AV DVVLMD+ MP + Sbjct: 9 VRVALVDDQALIRSGLAMLVDSQPDLTVVAEAGSGREAVASVSVAGADVVLMDVRMPEMD 68 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR + R ++++LT + ++AGA+G+L K A P+E+++AIR+V+ G Sbjct: 69 GIEATRALLRRPDAPRVVVLTTFDLDEYAFDAIEAGASGFLLKDAPPEELLAAIRTVHRG 128 Query: 122 QRYIASDIAQQMALSQIEP------------EKTESPFASLSERELQIMLMITKGQKVNE 169 IA +++ L+ + P E+ ++ ASL+ RE ++++++ +G E Sbjct: 129 DAVIAPSTTRRL-LTHMAPRLRSDQVRSAECEEQQAAVASLTPREREVLVLMAQGAANLE 187 Query: 170 ISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 I+ +L LS TV ++ R+ +KL V+ +A R GL Sbjct: 188 IAAELVLSEATVKTHVGRVLAKLGARDRVQAVLIAHRAGLVQ 229 >UniRef50_C6Y109 Response regulator receiver n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6Y109_PEDHD Length = 224 Score = 119 bits (297), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 125/216 (57%), Gaps = 9/216 (4%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTN-AVDVVLMDMSMPG 59 M+N+LL +DH +VR+GI+++LE + I +V EA G A++ R N ++D++L D++MPG Sbjct: 9 MLNLLLAEDHNVVRSGIKKLLEADEAINIVAEAINGAQALELIRDNGSIDLLLTDLNMPG 68 Query: 60 IGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVY 119 I G+ ++ +VK+++L++H + A+ QAGA+GYL K +E++ A++ + Sbjct: 69 INGISLISEVKNFNPNVKVVILSMHDDEKYVAQAFQAGASGYLLKNVDAEEMLFALKYIS 128 Query: 120 SGQRYIASDIAQQMALSQIEPEKTESPFA------SLSERELQIMLMITKGQKVNEISEQ 173 G YI + ++ M LS++ ++ S A S RE++I+ +I +G E++++ Sbjct: 129 RGGSYICAALSMSM-LSKV-LKRINSTVAVAETAIDFSSREIEILELIAEGLTNQEMADR 186 Query: 174 LNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 L +S +TV +R + K L A+ H + Sbjct: 187 LFISKRTVEGHRQSLTDKTGCRNTAALIRYAMVHDI 222 >UniRef50_C7MLQ9 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=29 Tax=Actinobacteria (class) RepID=C7MLQ9_CRYCD Length = 261 Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 73/216 (33%), Positives = 117/216 (54%), Gaps = 6/216 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 ++VL+VDD +LVR G + IL ++VVGEAS G +A + VVLMD+ MP Sbjct: 43 VDVLIVDDQDLVRNGFKLILSSYDHVRVVGEASNGIEAYEQSLALRPQVVLMDIRMPVED 102 Query: 62 GLEATRKIARST--ADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVY 119 G+ ATRKI T A ++++LT + +QAGA+G++ K A P ++V A+R+V Sbjct: 103 GIAATRKIVGDTALAQTRVLVLTTFDIDEYVYDALQAGASGFMLKDAEPDDIVRAVRTVA 162 Query: 120 SGQRYIASDIAQQMALSQIEPEKTESPFA----SLSERELQIMLMITKGQKVNEISEQLN 175 +G I I +++ + + S A L++RE +I+ + +G EI++ L Sbjct: 163 AGDALIQPSITRRLIETFVSSRPRTSAAAGGLVDLTDREREILRFVARGMSNEEIADDLV 222 Query: 176 LSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 +SP TV ++ R+ KL+ H +L A GL Sbjct: 223 ISPATVKTHLARIMGKLDAHDRAQLVVAAYESGLVQ 258 >UniRef50_UPI0001B502C9 two component LuxR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B502C9 Length = 229 Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 69/215 (32%), Positives = 121/215 (56%), Gaps = 4/215 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + VL+ DDH +VR G+R IL IKVVGE + G +AV+ R DVVLMD+ MP + Sbjct: 3 LRVLIADDHAVVRQGLRMILGLDNEIKVVGETTNGREAVRLARELCPDVVLMDLLMPVMD 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ AT +I + +V+++ LT ++ + ++AGA G+L K A ++ +A+++ +G Sbjct: 63 GVSATAEIRQDIPEVEVVALTSSLDDAMVMGAVRAGAIGFLLKNAEADDLRNAVKAAAAG 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Q +++ ++ EP E L+ERE +++ M+ +G+ EI+ L + +TV Sbjct: 123 QIHVSPAAISRLMGQVREPSGPE----QLTERETEVLTMLARGKANKEIARDLRIGQQTV 178 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLS 216 +Y + +KL +H + A++ GL A L+ Sbjct: 179 KTYVSHILTKLGVHSRTQAAVYAVQSGLVPAGELT 213 >UniRef50_C4ZEG3 Two-component response regulator (Extracellular proteinase response regulator) n=3 Tax=Bacteria RepID=C4ZEG3_EUBR3 Length = 214 Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 61/208 (29%), Positives = 117/208 (56%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 IN+++ DDH ++R G++ +LE IKV+ EA GED + +T DV+L+D++MP + Sbjct: 3 INIMITDDHSMIREGLKNLLELDGDIKVIAEAENGEDCLDKLKTFRPDVLLLDINMPKMN 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLE + + + VK+++LTVH E K + G GY+ K + E+ AI ++ G Sbjct: 63 GLEVLKALKDRKSKVKVLVLTVHNETEYLMKAVDIGINGYVLKDSESAELKKAIFTIADG 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + YI + + I+ + E +L++RE++++ + G+ +I++++ +S +TV Sbjct: 123 ETYIQPSLIPALNSKMIQKNEDELKIDALTKREMEVLKEMAVGKFNRDIAKEMKISERTV 182 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 ++ +F KL + + AIR+ + Sbjct: 183 KNHISSIFKKLEVTDRTQAAVFAIRNNI 210 >UniRef50_Q24Z68 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q24Z68_DESHY Length = 227 Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 69/213 (32%), Positives = 112/213 (52%), Gaps = 6/213 (2%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 +I V L DDH ++R + L+ + + VVG+A E AV+ DV+LMD+ Sbjct: 12 IITVFLADDHHILRQSLGVFLDQQRDLGVVGQAGTAEQAVREALHLRPDVILMDIDFLDF 71 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EAT +I + + +I+ LT+H+E + AG GYL K AA +++ AIR Sbjct: 72 SGIEATIQIRKEWPEARILALTMHSEENYLLPFLDAGGCGYLHKSAADTDLIRAIRMAAQ 131 Query: 121 GQRYIASD----IAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNL 176 GQ ++ + + Q L++ + P L+ERE Q++ M+ +G EI E+L + Sbjct: 132 GQVFLRPEGLAVLTVQQKLNKKQKHCGGEPV--LTERETQVLGMVARGYTSKEIGEKLYI 189 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 +P TV++YR R+ KL +L AI H + Sbjct: 190 APSTVDTYRERLIKKLEFTTRAQLVDYAILHDI 222 >UniRef50_C7PMV2 Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PMV2_CHIPD Length = 222 Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 66/212 (31%), Positives = 120/212 (56%), Gaps = 5/212 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +++ DDHE+ R G+ +L I +VG+A+ G + ++ + DVV+ D+ MP + Sbjct: 5 IRLVIADDHEIFRDGLALMLSRQPDITLVGQANNGRELLELLTSVEADVVMTDLKMPLMD 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ ATR + + D+KII L++ E L ++++AGA GYL K A QE++ AI SVY Sbjct: 65 GITATRALLQRNPDIKIIALSMFDEEELIVEMLEAGAKGYLLKNADKQEIIEAINSVYED 124 Query: 122 Q----RYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 R ++ +A + S+ P + E+ + ++RE +I+ +I + EI +++ LS Sbjct: 125 HIFYCRQTSARLAAMIVKSRFNPPR-ENNAVTFTDREKEIIRLICQQFTAQEIGDKIFLS 183 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 +TV +R R+ K+N+ + A+++ L Sbjct: 184 KRTVEGHRTRILEKMNVKNTAGVVVFALKNNL 215 >UniRef50_D1CF52 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=D1CF52_THET1 Length = 1648 Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 70/211 (33%), Positives = 122/211 (57%), Gaps = 3/211 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + V++ DDH L R GI+ +LE +G ++VGEAS G++AV+ + D+VLMD+SMP +G Sbjct: 1439 LRVVIADDHALFRDGIKSLLES-EGFQMVGEASNGQEAVELVHNLSPDLVLMDLSMPVMG 1497 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GL+A R I+ VK+I+LT E+ + ++AGA G++ K +E +R+V G Sbjct: 1498 GLDAIRLISADKPSVKVIVLTASEEDKDLFEAIKAGAQGFIPKNLESEEFFQLLRNVIRG 1557 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKG-QKVNEISEQLNLSPKT 180 + I +A ++ P ++ S L++RE +I+ ++ G ++S QL +S T Sbjct: 1558 EPAITPRLAGKLIDEFSRPVRSSS-LQMLTDREQEILQLLVNGVTSTKDLSRQLGVSEHT 1616 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V + + SKL++ ++ A++HGL + Sbjct: 1617 VKYHLRNILSKLHLQSRAQVVAWAVQHGLSS 1647 >UniRef50_A9AZR3 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AZR3_HERA2 Length = 213 Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/209 (33%), Positives = 117/209 (55%), Gaps = 3/209 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 +I ++LVDDH +VR G+R +L + +VGEA G DA++ V+LMD+ MP + Sbjct: 4 IIRIMLVDDHAIVREGLRTLLAEDTEFLIVGEAQNGADAIELAAVVRPHVILMDLVMPNV 63 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G++AT+ + +II+LT +++ +K +QAGA+GYL K E+ AIR+V + Sbjct: 64 DGIQATQALQSLMPSSRIIVLTSFSDDQWVSKAIQAGASGYLLKNVLKAELFLAIRTVAN 123 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 GQ ++ ++ AQ+ + Q + P SL+ERE ++ I G EI+ L+L+ T Sbjct: 124 GQPFLHAE-AQRTLMRQSTAPPSLLP--SLTERERSVLDGIVGGLSNKEIARSLHLTEGT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 V Y + +KL + + AI+HG Sbjct: 181 VKGYVSTILTKLAVADRTQAALYAIKHGF 209 >UniRef50_C0GF31 Two component transcriptional regulator, LuxR family n=3 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GF31_9FIRM Length = 218 Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 65/191 (34%), Positives = 110/191 (57%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 M+ V++VDDH +VR G++ ++E V+ EA GE+AV+ R DVV+MD+ MPG+ Sbjct: 1 MVRVMIVDDHAVVRVGLKSLIELHGDFSVIAEAGSGEEAVEVARETVPDVVVMDVRMPGM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G++A R I + D K+IMLT + ++ + AGA+GY+ K +++ AI Sbjct: 61 SGIDACRAIVEAVPDTKVIMLTSYADDEAIYSAILAGASGYVLKQTDNAKLLEAIEQAAR 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 + + + ++ E A LSE E +I+++I +G++ EI+E+L L+ KT Sbjct: 121 NESLLDPHVTGKVLKRMKEIAAATQYEAKLSETEKKILVLIAEGKRNKEIAEELFLAEKT 180 Query: 181 VNSYRYRMFSK 191 V +Y ++FSK Sbjct: 181 VRNYVSKIFSK 191 >UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteria RepID=Q8YV43_ANASP Length = 209 Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 66/210 (31%), Positives = 114/210 (54%), Gaps = 8/210 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+ DDH + R G+ I+ ++VV +A GE + + DV LMD+ MP + Sbjct: 7 IRVLIADDHAIFRQGLATIINRDPEMQVVAQAENGEQVIALFEEHQPDVTLMDLRMPEVE 66 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ A I + +II+LT + + + +QAGA GYL K P E+++AIR+V+ G Sbjct: 67 GVAAISAICATAKSARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVHRG 126 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 +YI D+ ++ PE LSEREL+++ + +G +I++ L++ TV Sbjct: 127 HKYIPPDVGAKLVQRLSNPE--------LSERELEVLRSLAQGMSNADIADALSIGEGTV 178 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 S+ R+ +KL++ + +A++ G+ N Sbjct: 179 KSHVNRILNKLDVSDRTQAVIVAVKRGIVN 208 >UniRef50_C7IMN9 Two component transcriptional regulator, LuxR family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IMN9_9CLOT Length = 210 Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 64/213 (30%), Positives = 121/213 (56%), Gaps = 8/213 (3%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +++ DD ++ R ++ ++E K ++V+G S G++A+ +C +N D+++MD+ MP + Sbjct: 1 MIKIVIADDMQMFRESLKFMIESDKEMQVIGLVSSGKEALDFCNSNTPDMIIMDLKMPEL 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G EATR I +++KI++L+ + K ++ GA G+++K E+ +IRS++ Sbjct: 61 DGFEATRLIKHMYSEIKIVILSTFNDEVSVTKAVKYGADGFITKDMGLLELHHSIRSIHI 120 Query: 121 GQRY----IASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNL 176 G R + S+I ++ EPEK +S RE+ I+ +I G+ EI E L L Sbjct: 121 GLRVFEDSVLSNIVSKIDTVSAEPEKA----IDISPREISIIKLIADGKSYKEIGETLYL 176 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 + TV + Y++ S+L++ ++L A + L Sbjct: 177 AEGTVRNIVYKLLSQLDLKDRIQLAVYAAKRKL 209 >UniRef50_C1B8T3 NarL family two-component response regulator n=61 Tax=Bacteria RepID=C1B8T3_RHOOB Length = 276 Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 70/195 (35%), Positives = 112/195 (57%), Gaps = 7/195 (3%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSM-PG 59 MI +LL DDH +VRAG+R +LE I+VVGEA+ + AV C T VD+VLMD+ PG Sbjct: 1 MIRLLLADDHAIVRAGLRALLEHEDDIEVVGEAATADAAVALCATTPVDLVLMDLRFGPG 60 Query: 60 IGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVY 119 G++ATR + ++++T + + + AGAAGYL K P E+++A+R+ Sbjct: 61 TSGVDATRNLRSLPNPPHVLVVTNYDTDADILDAVAAGAAGYLLKDTPPPELLAAVRAAS 120 Query: 120 SGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 +G ++ +A ++ + P SLS RE+Q++ ++ G+ EI ++L LS Sbjct: 121 AGDSVLSPAVASKLM------TRVRRPATSLSPREIQVLTLVAAGRSNREIGKELFLSET 174 Query: 180 TVNSYRYRMFSKLNI 194 TV S+ +F KL + Sbjct: 175 TVKSHLVHIFGKLGV 189 >UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 Tax=Dehalococcoides RepID=D2BGT0_DEHSV Length = 232 Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 74/209 (35%), Positives = 120/209 (57%), Gaps = 5/209 (2%) Query: 4 VLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGL 63 VL+ DDH ++R G+ R+L K I+VVGEA G++AV DVVLMD+ MP + G+ Sbjct: 6 VLIADDHAVLREGMSRLLSQEKDIEVVGEAGDGQEAVDMVAQFKPDVVLMDIVMPRLTGV 65 Query: 64 EATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQR 123 EAT+ I ++ I++LT +++ +++AGA+GYL K A E+V AIR++ +G+ Sbjct: 66 EATKLIKKNNPSTCILILTAYSDIRYILGLLEAGASGYLLKSAKSDEIVGAIRAIKAGES 125 Query: 124 YIASDIAQQMALSQIEPEKTESP----FASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 + S IA + L ++ ES LS RE++I+ + +KG EI+++L LS + Sbjct: 126 VLDS-IATRKLLERVVNVSKESDEDKVRGQLSPREVEILQLASKGLSNREIADKLTLSMR 184 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHG 208 TV ++ +F+K+ E R G Sbjct: 185 TVKAHLSNIFNKMRCSCRTEAIVKGFREG 213 >UniRef50_Q72LA2 Probable two-component response regulator n=1 Tax=Thermus thermophilus HB27 RepID=Q72LA2_THET2 Length = 198 Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/211 (33%), Positives = 121/211 (57%), Gaps = 15/211 (7%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAV--KWCRTNAVDVVLMDMSMPG 59 + V+LV+DH LVR G+ +LE+ G +VV E + E+A+ W +VVL+D+++PG Sbjct: 1 MRVVLVEDHHLVRKGLSLLLEE-GGHQVVAEFASAEEALATPW----EAEVVLLDLNLPG 55 Query: 60 IGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVY 119 +GGLEA +A+ K++++++H E A+ GA GYL K A Q+++ A+ + Sbjct: 56 MGGLEALPHLAQRA---KVLVVSMHNEPAYVARAFALGARGYLPKDALDQDLLEALARLS 112 Query: 120 SGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 G RY+ + + + Q EP LSERE ++ ++ +G +++++E+L LS K Sbjct: 113 QGLRYLHPSLTEALLEGQAEPGPE-----VLSERERAVVALLAQGYTLSQVAERLGLSVK 167 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 T ++Y+ R +KL + EL A HGL Sbjct: 168 TASTYKQRALNKLGLMDTPELVRWAREHGLA 198 >UniRef50_A0LVS2 Two component transcriptional regulator, LuxR family n=35 Tax=Actinomycetales RepID=A0LVS2_ACIC1 Length = 303 Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 74/213 (34%), Positives = 116/213 (54%), Gaps = 5/213 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+ DDH L R G+ +L I++V EAS G +AV DVVL+D+ MP Sbjct: 87 IKVLVADDHALFRRGLEMVLRQEPDIQLVAEASDGAEAVARAAETLPDVVLLDVRMPKRT 146 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA I KIIMLT+ E + ++AGA GYL K + EV +AIR+V+ G Sbjct: 147 GIEACAAIKEVCPSAKIIMLTISDEEADLYEAIKAGAMGYLLKEISIDEVAAAIRAVHGG 206 Query: 122 QRYIASDIAQQM-----ALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNL 176 Q I+ +A ++ +L + + + P L+ERE++++ ++ KG +I++QL + Sbjct: 207 QSLISPSMASKLLNEFASLIKRGDARHQVPAPKLTEREMEVLRLVAKGLNNRDIAKQLFI 266 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 S TV ++ + KL +H +E A+R L Sbjct: 267 SENTVKNHVRNILEKLQLHSRMEAVVYAVREKL 299 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 112/210 (53%), Gaps = 6/210 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+ DDH +VR G++ L+ + VV EA G++A+ + DVVL+D++MPG Sbjct: 5 IRVLVADDHPIVRQGLKTFLDIQPDLSVVAEARDGDEALALIAAHEPDVVLLDLNMPGSD 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G + ++A S K+I+LT TE + + AGAAG+L K P + AIRSV G Sbjct: 65 GAKVLTRLAASDHRAKVIVLTSVTEAVRVTEAVAAGAAGFLYKDIDPDSLAQAIRSVADG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Q A + M P A+L+ RE +++ ++ G+ EI++QL+++ KTV Sbjct: 125 QVIFAREAVTAMT------APAPGPVAALTAREREVLALVAAGRSNREIAKQLSVAEKTV 178 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++ +F KL + + A+ HG+ Sbjct: 179 KTHLSSLFRKLGVADRTQAALYAVTHGMAG 208 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobact... 305 8e-82 UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas... 301 1e-80 UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 300 2e-80 UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC... 297 1e-79 UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR fa... 295 5e-79 UniRef50_Q15T22 Two component transcriptional regulator, LuxR fa... 295 7e-79 UniRef50_Q52376 Response regulator gacA n=286 Tax=Gammaproteobac... 294 1e-78 UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus... 289 4e-77 UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR fa... 288 1e-76 UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=... 286 4e-76 UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=... 286 5e-76 UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa... 285 5e-76 UniRef50_C7MN84 Response regulator containing a CheY-like receiv... 285 6e-76 UniRef50_A0LVS2 Two component transcriptional regulator, LuxR fa... 285 9e-76 UniRef50_B1Y743 Two component transcriptional regulator, LuxR fa... 284 1e-75 UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti... 284 1e-75 UniRef50_C8WSR5 Two component transcriptional regulator, LuxR fa... 283 2e-75 UniRef50_C7RBI1 Two component transcriptional regulator, LuxR fa... 283 3e-75 UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr... 283 3e-75 UniRef50_A8MF72 Two component transcriptional regulator, LuxR fa... 283 3e-75 UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR fa... 283 4e-75 UniRef50_A4J6C2 Two component transcriptional regulator, LuxR fa... 282 7e-75 UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa... 282 7e-75 UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa... 282 8e-75 UniRef50_Q1QVM5 Two component transcriptional regulator, LuxR fa... 282 8e-75 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 281 1e-74 UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ... 280 2e-74 UniRef50_B8FDP3 Two component transcriptional regulator, LuxR fa... 280 2e-74 UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut... 280 3e-74 UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Ta... 279 4e-74 UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa... 278 7e-74 UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobact... 278 7e-74 UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=... 278 8e-74 UniRef50_B8GAC9 Two component transcriptional regulator, LuxR fa... 278 8e-74 UniRef50_A1WT06 Two component transcriptional regulator, LuxR fa... 278 9e-74 UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR fa... 278 9e-74 UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa... 278 1e-73 UniRef50_C1TQ52 Response regulator containing a CheY-like receiv... 278 1e-73 UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillac... 278 1e-73 UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa... 278 1e-73 UniRef50_D0LYS4 Two component transcriptional regulator, LuxR fa... 277 2e-73 UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Ac... 277 2e-73 UniRef50_B9XL75 Two component transcriptional regulator, LuxR fa... 277 2e-73 UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa... 277 3e-73 UniRef50_B3PFS2 GacA n=1 Tax=Cellvibrio japonicus Ueda107 RepID=... 277 3e-73 UniRef50_B9XC41 Two component transcriptional regulator, LuxR fa... 276 3e-73 UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=... 276 3e-73 UniRef50_C6BTX3 Two component transcriptional regulator, LuxR fa... 276 3e-73 UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR fa... 276 4e-73 UniRef50_D1AAU8 Two component transcriptional regulator, LuxR fa... 276 4e-73 UniRef50_C7MUJ2 Response regulator containing a CheY-like receiv... 276 4e-73 UniRef50_Q1H354 Two component transcriptional regulator, LuxR fa... 276 5e-73 UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteri... 275 6e-73 UniRef50_A5WFD3 Two component transcriptional regulator, LuxR fa... 275 8e-73 UniRef50_B8G137 Two component transcriptional regulator, LuxR fa... 275 8e-73 UniRef50_D1C1C8 Two component transcriptional regulator, LuxR fa... 275 1e-72 UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family prot... 274 1e-72 UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax... 274 2e-72 UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa... 273 2e-72 UniRef50_A5G586 Two component transcriptional regulator, LuxR fa... 273 2e-72 UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium ... 273 2e-72 UniRef50_B2A8K6 Two component transcriptional regulator, LuxR fa... 273 2e-72 UniRef50_C1A9U5 NarL family two-component response regulator n=1... 273 2e-72 UniRef50_B4CWX5 Two component transcriptional regulator, LuxR fa... 273 3e-72 UniRef50_B0C955 Two-component transcriptional regulator, LuxR fa... 273 3e-72 UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteri... 272 4e-72 UniRef50_D1VBH1 Two component transcriptional regulator, LuxR fa... 272 5e-72 UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR fa... 272 5e-72 UniRef50_D1XHI5 Two component transcriptional regulator, LuxR fa... 272 6e-72 UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Baci... 272 7e-72 UniRef50_B1M5J4 Two component transcriptional regulator, LuxR fa... 272 7e-72 UniRef50_O07528 Uncharacterized transcriptional regulatory prote... 272 7e-72 UniRef50_Q47FR0 Two component transcriptional regulator, LuxR fa... 272 8e-72 UniRef50_C6XAP6 Two component transcriptional regulator, LuxR fa... 272 9e-72 UniRef50_A9AX03 Two component transcriptional regulator, LuxR fa... 271 1e-71 UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR fa... 271 1e-71 UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsoni... 271 1e-71 UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa... 271 1e-71 UniRef50_A0K2I9 Two component transcriptional regulator, LuxR fa... 271 2e-71 UniRef50_A5V148 Two component transcriptional regulator, LuxR fa... 270 2e-71 UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92... 270 2e-71 UniRef50_D1C6S1 Two component transcriptional regulator, LuxR fa... 270 2e-71 UniRef50_P55184 Uncharacterized transcriptional regulatory prote... 269 4e-71 UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ecto... 269 5e-71 UniRef50_A9B5L0 Two component transcriptional regulator, LuxR fa... 269 5e-71 UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 ... 269 5e-71 UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR fa... 269 5e-71 UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Sele... 269 5e-71 UniRef50_C0N6H7 Response regulator receiver domain protein n=1 T... 269 6e-71 UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR fa... 268 6e-71 UniRef50_Q024Y7 Two component transcriptional regulator, LuxR fa... 268 7e-71 UniRef50_C0WKL5 Response regulator n=6 Tax=Corynebacterium RepID... 268 8e-71 UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR fa... 268 1e-70 UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiob... 268 1e-70 UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 ... 268 1e-70 UniRef50_A7NP18 Two component transcriptional regulator, LuxR fa... 268 1e-70 UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=... 268 1e-70 UniRef50_B8FX94 Two component transcriptional regulator, LuxR fa... 267 1e-70 UniRef50_A1K960 Probable transcriptional regulator, LuxR family ... 267 1e-70 UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistip... 267 1e-70 UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 ... 267 1e-70 UniRef50_Q04VJ6 Receiver component of a two-component response r... 267 2e-70 UniRef50_UPI0001B502C9 two component LuxR family transcriptional... 267 2e-70 UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides... 267 2e-70 UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 T... 267 2e-70 UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. ora... 266 3e-70 UniRef50_B0C756 Two-component transcriptional regulator, LuxR fa... 266 3e-70 UniRef50_C6E3E1 Two component transcriptional regulator, LuxR fa... 266 4e-70 UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 ... 266 4e-70 UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR fa... 266 5e-70 UniRef50_C7RMN3 Two component transcriptional regulator, LuxR fa... 265 5e-70 UniRef50_A0L9F1 Two component transcriptional regulator, LuxR fa... 265 6e-70 UniRef50_A4VZN8 Response regulator containing a CheY-like receiv... 265 6e-70 UniRef50_B2J8J5 Two component transcriptional regulator, LuxR fa... 265 6e-70 UniRef50_A3CKH3 Two-component system transcriptional regulator (... 265 6e-70 UniRef50_A7HA46 Two component transcriptional regulator, LuxR fa... 265 6e-70 UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR fa... 265 6e-70 UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR fa... 265 7e-70 UniRef50_C4ZEG3 Two-component response regulator (Extracellular ... 265 8e-70 UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR fa... 265 1e-69 UniRef50_C4DCK3 Response regulator containing a CheY-like receiv... 264 1e-69 UniRef50_C7MLQ9 Response regulator containing a CheY-like receiv... 264 1e-69 UniRef50_Q1AST2 Two component transcriptional regulator, LuxR fa... 264 1e-69 UniRef50_B2JSN3 Two component transcriptional regulator, LuxR fa... 264 2e-69 UniRef50_C8WS10 Two component transcriptional regulator, LuxR fa... 264 2e-69 UniRef50_B1ZY58 Two component transcriptional regulator, LuxR fa... 263 2e-69 UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V... 263 2e-69 UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovib... 263 2e-69 UniRef50_C6D0G6 Two component transcriptional regulator, LuxR fa... 263 2e-69 UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomyceta... 263 2e-69 UniRef50_Q5WI37 Two-component response regulator n=5 Tax=Bacilla... 263 3e-69 UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa... 263 3e-69 UniRef50_Q1LE49 Two component transcriptional regulator, LuxR fa... 263 3e-69 UniRef50_D1CF52 Two component transcriptional regulator, LuxR fa... 263 3e-69 UniRef50_C1TL94 Response regulator containing a CheY-like receiv... 263 3e-69 UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromon... 263 4e-69 UniRef50_B2A6W2 Two component transcriptional regulator, LuxR fa... 263 4e-69 UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococc... 262 5e-69 UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacill... 262 5e-69 UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi... 262 5e-69 UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR fa... 262 7e-69 UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiob... 262 7e-69 UniRef50_Q13QW9 Two component transcriptional regulator, LuxR fa... 262 8e-69 UniRef50_UPI00018507A5 two component LuxR family transcriptional... 262 8e-69 UniRef50_A5URU4 Two component transcriptional regulator, LuxR fa... 262 8e-69 UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas fl... 262 9e-69 UniRef50_C1RMQ2 Response regulator containing a CheY-like receiv... 262 9e-69 UniRef50_C6WV69 Two component transcriptional regulator, LuxR fa... 262 9e-69 UniRef50_A1SKW0 Two component transcriptional regulator, LuxR fa... 262 9e-69 UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga t... 261 1e-68 UniRef50_C5C7H0 Response regulator containing a CheY-like receiv... 261 1e-68 UniRef50_D1BX47 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_B1KE04 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding... 260 2e-68 UniRef50_Q5NZZ3 Two-component system response regulator n=3 Tax=... 260 2e-68 UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR fa... 260 3e-68 UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepI... 260 3e-68 UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID... 260 4e-68 UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR fa... 259 4e-68 UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmic... 259 4e-68 UniRef50_A9AZR3 Two component transcriptional regulator, LuxR fa... 259 4e-68 UniRef50_D2Q2Q8 Two component transcriptional regulator, LuxR fa... 259 4e-68 UniRef50_C7QC31 Two component transcriptional regulator, LuxR fa... 259 5e-68 UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC... 259 5e-68 UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=... 259 5e-68 UniRef50_Q2BNR9 DNA-binding response regulator, LuxR family prot... 259 6e-68 UniRef50_C4XMF2 NarL family two-component response regulator n=1... 259 6e-68 UniRef50_D1BGN7 Response regulator containing a CheY-like receiv... 259 6e-68 UniRef50_C5VAN3 Two component transcriptional regulator, LuxR fa... 258 7e-68 UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrh... 258 8e-68 UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexac... 258 8e-68 UniRef50_UPI0001C314AF two component transcriptional regulator, ... 258 8e-68 UniRef50_UPI0001789C57 two component transcriptional regulator, ... 258 9e-68 UniRef50_C5UZV9 Two component transcriptional regulator, LuxR fa... 258 1e-67 UniRef50_A4FAA4 Two component system response regulator n=2 Tax=... 258 1e-67 UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Act... 258 1e-67 UniRef50_C7MRK0 Response regulator containing a CheY-like receiv... 258 1e-67 UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR fa... 257 2e-67 UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Synt... 257 2e-67 UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium... 257 2e-67 UniRef50_A2SLK8 Two component transcriptional regulator, LuxR fa... 257 2e-67 UniRef50_C6CZA5 Two component transcriptional regulator, LuxR fa... 257 2e-67 UniRef50_B6JD38 Two component transcriptional regulator, LuxR fa... 257 2e-67 UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 ... 257 3e-67 UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacilla... 257 3e-67 UniRef50_A9VLR5 Two component transcriptional regulator, LuxR fa... 256 3e-67 UniRef50_A1VB77 Two component transcriptional regulator, LuxR fa... 256 3e-67 UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 T... 256 3e-67 UniRef50_B7AAT6 Two component transcriptional regulator, LuxR fa... 256 4e-67 UniRef50_C1TL62 Response regulator containing a CheY-like receiv... 256 4e-67 UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermop... 256 4e-67 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 256 4e-67 UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, ... 256 4e-67 UniRef50_D1CI66 Two component transcriptional regulator, LuxR fa... 256 4e-67 UniRef50_B8ET67 Two component transcriptional regulator, LuxR fa... 256 5e-67 UniRef50_A2SCN0 Two-component response regulator n=1 Tax=Methyli... 256 5e-67 UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betapro... 255 5e-67 UniRef50_C5V5K1 Two component transcriptional regulator, LuxR fa... 255 6e-67 UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 T... 255 6e-67 UniRef50_Q11YW8 Two component transcriptional regulator, LuxR fa... 255 6e-67 UniRef50_Q2BNZ3 Transcriptional regulator, LuxR family protein n... 255 6e-67 UniRef50_UPI0001789139 two component transcriptional regulator, ... 255 7e-67 UniRef50_B0C7V6 Two-component response regulator n=1 Tax=Acaryoc... 255 7e-67 UniRef50_A9B4P1 Two component transcriptional regulator, LuxR fa... 255 8e-67 UniRef50_C7NKN7 Response regulator containing a CheY-like receiv... 255 8e-67 UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microsc... 255 8e-67 UniRef50_B4D808 Two component transcriptional regulator, LuxR fa... 255 9e-67 UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR fa... 255 9e-67 UniRef50_A0NNP3 Response regulator containing a CheY-like receiv... 255 1e-66 UniRef50_A1ASJ5 Two component transcriptional regulator, LuxR fa... 255 1e-66 UniRef50_C4XNR8 NarL family two-component response regulator n=1... 255 1e-66 UniRef50_B4D831 Two component transcriptional regulator, LuxR fa... 255 1e-66 UniRef50_C6C0G1 Two component transcriptional regulator, LuxR fa... 254 1e-66 UniRef50_B9XAM6 Two component transcriptional regulator, LuxR fa... 254 1e-66 UniRef50_D1BCA8 Two component transcriptional regulator, LuxR fa... 254 1e-66 UniRef50_B4D2X8 Two component transcriptional regulator, LuxR fa... 254 2e-66 UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeoba... 254 2e-66 UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibac... 254 2e-66 UniRef50_C4RJ91 Two-component system response regulator n=2 Tax=... 254 2e-66 UniRef50_P94439 Uncharacterized transcriptional regulatory prote... 254 2e-66 UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR fa... 253 2e-66 UniRef50_C7R398 Two component transcriptional regulator, LuxR fa... 253 2e-66 UniRef50_C1B8T3 NarL family two-component response regulator n=6... 253 2e-66 UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator rece... 253 2e-66 UniRef50_D2PZN7 Two component transcriptional regulator, LuxR fa... 253 2e-66 UniRef50_C0GJ72 Two component transcriptional regulator, LuxR fa... 253 2e-66 UniRef50_A1TVD4 Two component transcriptional regulator, LuxR fa... 253 3e-66 UniRef50_A9U6E4 Predicted protein (Fragment) n=1 Tax=Physcomitre... 253 3e-66 UniRef50_A5FIE9 Two component transcriptional regulator, LuxR fa... 253 4e-66 UniRef50_C6WIC9 Two component transcriptional regulator, LuxR fa... 253 4e-66 UniRef50_B6A2W0 Two component transcriptional regulator, LuxR fa... 253 4e-66 UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 ... 253 4e-66 UniRef50_B2KBW2 Two component transcriptional regulator, LuxR fa... 252 5e-66 UniRef50_A6W0B9 Two component transcriptional regulator, LuxR fa... 252 5e-66 UniRef50_A6BYP5 Response regulator receiver domain protein n=1 T... 252 5e-66 UniRef50_C2RNB5 Two-component protein Kinase n=1 Tax=Bacillus ce... 252 6e-66 UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=... 252 6e-66 UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paeniba... 252 7e-66 Sequences not found previously or not previously below threshold: UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR fa... 271 1e-71 UniRef50_B2J2N1 Two component transcriptional regulator, LuxR fa... 270 3e-71 UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR fa... 265 9e-70 UniRef50_B5JFN7 Response regulator receiver domain protein n=1 T... 263 3e-69 UniRef50_A3Y699 Putative two component system response regulator... 263 4e-69 UniRef50_C3JVF4 Two component transcriptional regulator, LuxR fa... 262 6e-69 UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 ... 259 4e-68 UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus... 258 1e-67 UniRef50_C7Q058 Two component transcriptional regulator, LuxR fa... 256 4e-67 UniRef50_D1B9T1 Two component transcriptional regulator, LuxR fa... 253 2e-66 UniRef50_D1BXU0 Two component transcriptional regulator, LuxR fa... 253 3e-66 UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenel... 253 3e-66 >UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobacteria RepID=GACA_PSEAE Length = 214 Score = 305 bits (782), Expect = 8e-82, Method: Composition-based stats. Identities = 128/214 (59%), Positives = 168/214 (78%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VL+VDDH+LVR GI R+L DI+G++VVG+A CGED +K R DVVLMD+ MPGI Sbjct: 1 MIKVLVVDDHDLVRTGITRMLADIEGLQVVGQADCGEDCLKLARELKPDVVLMDVKMPGI 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GGLEATRK+ RS D+K++++TV E+P P ++MQAGAAGY++KGA +E+V AIR V++ Sbjct: 61 GGLEATRKLLRSQPDIKVVVVTVCEEDPFPTRLMQAGAAGYMTKGAGLEEMVQAIRQVFA 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 GQRYI+ IAQQ+AL +P++ +SPF SLSERE+QI LMI KV IS++L LSPKT Sbjct: 121 GQRYISPQIAQQLALKSFQPQQHDSPFDSLSEREIQIALMIANCHKVQSISDKLCLSPKT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 VN+YRYR+F KL+I DVEL LA+RHG+ +A + Sbjct: 181 VNTYRYRIFEKLSITSDVELALLAVRHGMVDAAS 214 >UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU8_DESAH Length = 219 Score = 301 bits (773), Expect = 1e-80, Method: Composition-based stats. Identities = 77/214 (35%), Positives = 132/214 (61%), Gaps = 4/214 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+ +DH +VR G+ +L I+VVGEA G +A+K A DVVLMD+SMP + Sbjct: 4 IKVLVAEDHTIVRKGLCSLLYSEPDIEVVGEAENGREAIKMVEELAPDVVLMDISMPELN 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++ATR++ + DVKI++L++H+ + ++AGA+GYL K +AP +++ AI + ++G Sbjct: 64 GMDATRQLKKKYPDVKILILSMHSTEEYIFETLRAGASGYLIKRSAPTDLIKAIHAAHAG 123 Query: 122 QRYIASDIAQQMALSQIEPEKT----ESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 +++ I++++ + ++ ++ LS RE +++ +I +G EI+ L +S Sbjct: 124 DCFLSPSISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANREIAGHLYIS 183 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 PKTV ++R + KL ++G ELT AIR GL Sbjct: 184 PKTVEAHRNHIQKKLGLNGTAELTKYAIRKGLVE 217 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 300 bits (770), Expect = 2e-80, Method: Composition-based stats. Identities = 79/214 (36%), Positives = 127/214 (59%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +LLVDDH +VR G R +LE ++VVGEA GE+A+ R DV+LMD+SMPG+ Sbjct: 15 ITLLLVDDHPVVRKGTRELLEGEADLRVVGEAESGEEAILKARQLMPDVILMDVSMPGMN 74 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR I V I++LT + ++ +++AGAAGYL K A+ E++ A+R+V +G Sbjct: 75 GIEATRAIKAERPGVGILVLTSYDDDAYVFALLEAGAAGYLLKNASEDELLGAVRAVAAG 134 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + + +A+++ + P +LS REL+++ + G+ EI+ L++SP+TV Sbjct: 135 ESALHPAVARKVLERFSTHQTPTPPEDALSPRELEVLRVAATGRTNKEIARDLDISPRTV 194 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETL 215 + +FSKL + E I+ G + +TL Sbjct: 195 QVHLANIFSKLGVGSRTEAVLYGIKRGWIDPKTL 228 >UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30 Tax=Bacillales RepID=B7GL14_ANOFW Length = 260 Score = 297 bits (763), Expect = 1e-79, Method: Composition-based stats. Identities = 64/223 (28%), Positives = 116/223 (52%), Gaps = 12/223 (5%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 ++L+DDH+L R GI+RIL+ + +VV E S G++A+ DVV+MD++MP + G Sbjct: 38 RIVLIDDHKLFREGIKRILDFEQDFEVVAEGSDGDEALALVERYKPDVVIMDINMPHVNG 97 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 +EATR++ + D K+I+L++H + +Q GA GYL K ++ A+R V G Sbjct: 98 VEATRQLIEAYPDTKVIILSIHDDESYVMHALQTGAMGYLLKEMDADALIEAVRVVAEGG 157 Query: 123 RYIASDIAQQMALSQIEPEKTES------------PFASLSERELQIMLMITKGQKVNEI 170 Y+ + + E P+ L+ RE +++ ++ G+ I Sbjct: 158 SYLHPKVTHNLVKEYRRLVAGEGGGKEKQNQDVCRPYHLLTRRECEVLQLLADGKSNKGI 217 Query: 171 SEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 ++ L +S KTV ++ + KLN++ + +AI++G + Sbjct: 218 ADALYISEKTVKNHVSNILQKLNVNDRTQAVVVAIKNGWVEVK 260 >UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR family n=3 Tax=Clostridia RepID=Q2RJU9_MOOTA Length = 222 Score = 295 bits (758), Expect = 5e-79, Method: Composition-based stats. Identities = 70/214 (32%), Positives = 129/214 (60%), Gaps = 2/214 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +L+ DDH LVR GIR+ILE ++VVGEA+ G++A++ R V++MD++MPG+ Sbjct: 7 ITILIADDHSLVREGIRKILELEPDLQVVGEAATGQEAIEMTRRYQPQVIIMDINMPGLN 66 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EAT+ I + + I+ LT+H + +++++G +GY+ K + +E+V A+ V G Sbjct: 67 GIEATKVIRQEWPQIAILALTIHDDEEYIIELLRSGVSGYVLKDISAEELVQAVYQVARG 126 Query: 122 QRYIASDIAQQMA--LSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 R I +AQ++ + + +P L+ RE +I++ ++ G+ EI+ +L +S K Sbjct: 127 ARVIHPGVAQKVIGCIQKQKPFTPAPVSIPLTAREREILIHVSLGKSNREIARELFISEK 186 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 TV ++ +F K+ + + A++HGL +A+ Sbjct: 187 TVKNHLTHIFHKIGVSDRTQAALYALKHGLNDAK 220 >UniRef50_Q15T22 Two component transcriptional regulator, LuxR family n=4 Tax=Alteromonadales RepID=Q15T22_PSEA6 Length = 214 Score = 295 bits (757), Expect = 7e-79, Method: Composition-based stats. Identities = 134/215 (62%), Positives = 175/215 (81%), Gaps = 1/215 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +LLVDDHELVR GIRRILED++G VVGEA+ GE+AVK+CR NA D+VLMDMSMPGI Sbjct: 1 MIKILLVDDHELVRTGIRRILEDVQGFVVVGEATTGEEAVKFCRKNAPDLVLMDMSMPGI 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GGLEAT++I R + + ++I+L+VH ENP+PAKVM+ GA GYL+K + P+E+ AIR V + Sbjct: 61 GGLEATKQILRFSENTRVIVLSVHKENPIPAKVMRMGAFGYLTKDSDPKEMELAIRKVAA 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 GQ+Y++ DIAQQ+A+ ++ +PF SLSEREL+I LM+TKG KV +I++ LN+S KT Sbjct: 121 GQKYVSPDIAQQIAIGALDFSDG-NPFESLSERELEITLMLTKGSKVPDIAKFLNISAKT 179 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETL 215 VN++RYRMF KLN+ DVELTHLA+RH L N+E L Sbjct: 180 VNTHRYRMFEKLNVSTDVELTHLALRHKLINSENL 214 >UniRef50_Q52376 Response regulator gacA n=286 Tax=Gammaproteobacteria RepID=GACA_PSEU2 Length = 214 Score = 294 bits (755), Expect = 1e-78, Method: Composition-based stats. Identities = 125/212 (58%), Positives = 162/212 (76%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VL+VDDH+LVR GI R+L DI G++VVG+A GE+++K R DVVLMD+ MPGI Sbjct: 1 MIKVLVVDDHDLVRTGITRMLADIDGLQVVGQADSGEESLKKARELKPDVVLMDVKMPGI 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GGLEATRK+ RS D+K++ +TV E+P P +++QAGAAGY++KGA E+V AIR V++ Sbjct: 61 GGLEATRKMLRSHPDIKVVAVTVCEEDPFPTRLLQAGAAGYMTKGAGLAEMVQAIRLVFA 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 GQRYI+ IAQQ+AL +P+ SPF LSERE+QI LMI QKV IS++L LSPKT Sbjct: 121 GQRYISPQIAQQLALKSFQPQVNNSPFDLLSEREIQIALMIVGCQKVQTISDKLCLSPKT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 VN+YRYR+F KL+I DVEL LA+RHG+ +A Sbjct: 181 VNTYRYRIFEKLSISSDVELALLAVRHGMVDA 212 >UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus RepID=A0R9S0_BACAH Length = 216 Score = 289 bits (741), Expect = 4e-77, Method: Composition-based stats. Identities = 73/213 (34%), Positives = 122/213 (57%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +L+VDDH +R IR ILED + VVGEAS G+ ++ D +LMD+++PG Sbjct: 4 MIKILVVDDHAFLRDAIRSILEDESDMNVVGEASSGDGVLEKVEACRPDCILMDINLPGK 63 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EAT + ++ + ++++ T++ + +QAGA GYL K ++ ++VV+AIR +Y Sbjct: 64 NGIEATELVKKNYPNCRVLVFTMYEHDEYLMDALQAGADGYLLKDSSSEQVVAAIRMLYR 123 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G I + +++ + K ES L+ERE +I+ + KG EI+E L +S KT Sbjct: 124 GDSVIHPRMTKKLITYHQQKMKVESNENELTEREKEILFELVKGLSNKEIAEALYISDKT 183 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 V + ++F KLN+ + A+R+ L + Sbjct: 184 VKIHINKIFKKLNVKSRSQAVIYAVRNQLVPLD 216 >UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiaceae RepID=Q1LEP5_RALME Length = 214 Score = 288 bits (738), Expect = 1e-76, Method: Composition-based stats. Identities = 81/213 (38%), Positives = 128/213 (60%), Gaps = 2/213 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI V++ DDH +VR G+R ILE +VVGEA+ G + + R + V+L+D+SMPG Sbjct: 1 MIRVIIADDHTVVRNGLRHILERTSDFEVVGEAARGTEVPQLVRELSPHVILLDLSMPGR 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GLE R++ ++I++LT+H E + +AGAAGYL+K +A E+V A+R V + Sbjct: 61 NGLELIRQLRTDHPALRILVLTMHAEEQYVVRAFRAGAAGYLTKESAATELVEALRKVAA 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G Y++ +A+++AL EK ++P LS+REL++ I G+ + +I+ L +S KT Sbjct: 121 GGTYVSPAMAEKLALGL--QEKPDAPHEGLSDRELEVFRRIVDGESLTQIAAALCVSAKT 178 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 V++Y+ R+ KL + D L AI L E Sbjct: 179 VSTYKMRLMEKLQLRSDAALVRYAIEARLFGDE 211 >UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=Thermomicrobia (class) RepID=B9L2G4_THERP Length = 246 Score = 286 bits (733), Expect = 4e-76, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 117/210 (55%), Gaps = 1/210 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+VDDH+L R G+R+++E I+VVGEA+ G+DA+K DVVLMD++MPG+ Sbjct: 28 IRVLIVDDHDLFREGLRQLIETDPAIEVVGEAANGQDALKMVAELQPDVVLMDINMPGMD 87 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ AT I + V ++MLT++ + ++AGA YL K + P+E++ AI G Sbjct: 88 GIRATEAIVQQYRHVHVLMLTMYDDEEYVLHAIRAGARSYLVKNSKPEELLRAIHVAAEG 147 Query: 122 QRYIASDIAQQMALSQIE-PEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 I D+A + K + LS+REL ++ ++ +G +I++ LNL+ T Sbjct: 148 GATIDPDLAPILMREYQRLLTKAPTRGQDLSDRELTMLRLLAQGYNNRQIADALNLAEST 207 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 V + +F KL + + AI HGL Sbjct: 208 VKNNLSALFQKLGVRDRTQAVIYAISHGLV 237 >UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0H3_THERP Length = 245 Score = 286 bits (733), Expect = 5e-76, Method: Composition-based stats. Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 10/222 (4%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 IN+L+VDDH L R+GIR LE +VGEA+ G +A++ + DV+L+D+S+PG+ Sbjct: 4 INILIVDDHPLFRSGIRWSLEQNPQFVIVGEAADGSEALRLADELSPDVILVDLSLPGMN 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLE R + R +I+LT+H ++ ++AGA+ Y +K P++++ I V G Sbjct: 64 GLEVARALKRRQPQAGVIILTMHQDDEQLFNAIRAGASAYCTKDIEPEQLIDVITRVARG 123 Query: 122 QRYIA------SDIAQQMALSQIEPEKTESP----FASLSERELQIMLMITKGQKVNEIS 171 + I +A ++ E + + F+ L+ RE++I+ + +G EI+ Sbjct: 124 EYLINEMVLSRPFVASRVLDQFRELSRLDRTSSGFFSPLTPREIEILDCVARGYSNKEIA 183 Query: 172 EQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 + LN+S +TV ++ + KL ++ + A+RHG E Sbjct: 184 QALNISDQTVKNHITSILRKLAVNDRTQAVIYALRHGWIKLE 225 >UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=C6E2Z1_GEOSM Length = 216 Score = 285 bits (732), Expect = 5e-76, Method: Composition-based stats. Identities = 78/216 (36%), Positives = 126/216 (58%), Gaps = 2/216 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI V++VDDH +VR GIR +LE + VV EA G A + A VVLMDM+MPG+ Sbjct: 1 MIKVMVVDDHSIVREGIRILLERFPDLSVVAEADNGRKASELAADLAPHVVLMDMTMPGL 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G++AT+++ + +V++++L++H + ++ +AGA GYL K A E+V A+R V Sbjct: 61 NGIDATQRLLAACPEVRVLILSMHKDKRFVSQAFRAGARGYLLKDCASAELVQAVRQVAC 120 Query: 121 GQRYIASDIAQQMALSQIE--PEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 G+ Y+ I + + PE P L+ RE +++ +I +G + QLN++ Sbjct: 121 GEMYVCHGIIGVVVHDYVTRLPESLTQPEVPLTPREREVLQLIAEGNNAKNAAYQLNINV 180 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 KTV+++R ++ KL + ELT AIR GL + E+ Sbjct: 181 KTVDTHRQQIMKKLKMRSVAELTKYAIREGLISMES 216 >UniRef50_C7MN84 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MN84_CRYCD Length = 215 Score = 285 bits (732), Expect = 6e-76, Method: Composition-based stats. Identities = 71/214 (33%), Positives = 125/214 (58%), Gaps = 3/214 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMP-G 59 MI+V + DDH +VR G I+ ++VVGEA+ G++A V+L+D+SMP G Sbjct: 1 MIDVAIADDHAVVRQGFAFIINSQCDMRVVGEAADGKEAYDLVARVEPHVLLLDISMPPG 60 Query: 60 IGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVY 119 GL A +I+ +II+LT+ E ++ GAAGY+ K ++ + ++ AIR V Sbjct: 61 ENGLIACERISCDFPSTRIIILTMFEETDYLFYTLRGGAAGYVLKNSSTEVLLGAIRKVA 120 Query: 120 SGQRYIASDIAQQMA--LSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 +G+ YI ++AQ ++ L ++P+ LS RE +I ++ +G E +++L +S Sbjct: 121 TGETYIEPNMAQALSGKLHGQSGVAEKNPYHELSSREFEIFSLLAQGYTNKEAADKLFIS 180 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 KTV ++R ++++KL ++ EL HLA+++ L + Sbjct: 181 VKTVETHRSKIYAKLGVNSRAELVHLALKYHLLD 214 >UniRef50_A0LVS2 Two component transcriptional regulator, LuxR family n=35 Tax=Actinomycetales RepID=A0LVS2_ACIC1 Length = 303 Score = 285 bits (730), Expect = 9e-76, Method: Composition-based stats. Identities = 73/215 (33%), Positives = 113/215 (52%), Gaps = 5/215 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+ DDH L R G+ +L I++V EAS G +AV DVVL+D+ MP Sbjct: 87 IKVLVADDHALFRRGLEMVLRQEPDIQLVAEASDGAEAVARAAETLPDVVLLDVRMPKRT 146 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA I KIIMLT+ E + ++AGA GYL K + EV +AIR+V+ G Sbjct: 147 GIEACAAIKEVCPSAKIIMLTISDEEADLYEAIKAGAMGYLLKEISIDEVAAAIRAVHGG 206 Query: 122 QRYIASDIAQQMALSQIE-----PEKTESPFASLSERELQIMLMITKGQKVNEISEQLNL 176 Q I+ +A ++ + + P L+ERE++++ ++ KG +I++QL + Sbjct: 207 QSLISPSMASKLLNEFASLIKRGDARHQVPAPKLTEREMEVLRLVAKGLNNRDIAKQLFI 266 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 S TV ++ + KL +H +E A+R L Sbjct: 267 SENTVKNHVRNILEKLQLHSRMEAVVYAVREKLLE 301 >UniRef50_B1Y743 Two component transcriptional regulator, LuxR family n=6 Tax=Bacteria RepID=B1Y743_LEPCP Length = 211 Score = 284 bits (729), Expect = 1e-75, Method: Composition-based stats. Identities = 80/210 (38%), Positives = 133/210 (63%), Gaps = 1/210 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + V + DDH +VR G++++L V GEAS G + + C A DV ++D MPG G Sbjct: 3 MRVFIADDHPVVRQGLKQLLGAEADFSVAGEASSGHEVIDQCGRFAWDVAVLDYRMPGKG 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++ +++ + D +++L+V E+ +V++AGAAGYL+K +AP+++V+AIR V G Sbjct: 63 GIDLIKELRQRFPDRPVLVLSVCPEDQYAMRVLRAGAAGYLTKESAPEDLVNAIRKVARG 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 R++++ + +Q+ALS + E LS+RE QIM ++ G+KV EI++QL LSP T+ Sbjct: 123 GRFVSAALGEQLALS-LSTGGDEPLHCRLSDREYQIMWLLASGKKVGEIAQQLFLSPNTI 181 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++YR R+ KL++ + EL AI H L + Sbjct: 182 STYRKRILEKLDLKSNAELMRYAIGHQLVD 211 >UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales RepID=D2BDI1_STRRD Length = 227 Score = 284 bits (729), Expect = 1e-75, Method: Composition-based stats. Identities = 74/208 (35%), Positives = 123/208 (59%), Gaps = 1/208 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLLVDDH L+R G+R +LE + G +VVGEA GE+A+ + DVV+MD+ MPG+ Sbjct: 19 IRVLLVDDHPLLRHGLRALLEQVGGAEVVGEAGDGEEAIALVLSLNPDVVVMDLVMPGVT 78 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR + D+ +++LT+ ++ ++AGA GY+ KGA + ++A+R+V G Sbjct: 79 GIEATRTLIDRRPDLGVLVLTMSEDDASVFAALRAGARGYVLKGADGNDFIAAVRAVARG 138 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + +A+++ + PF L++RE +I+ ++ G+ EI+ +L LS KTV Sbjct: 139 EAVYGPAVARRI-RRFLTTGPESGPFPELTQREREILDLLASGKSNAEIARRLFLSQKTV 197 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 ++ +F+KL + + A R GL Sbjct: 198 KNHLTSIFAKLQVADRTQAVVRARRAGL 225 >UniRef50_C8WSR5 Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSR5_ALIAD Length = 231 Score = 283 bits (727), Expect = 2e-75, Method: Composition-based stats. Identities = 72/221 (32%), Positives = 120/221 (54%), Gaps = 4/221 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+VDDHEL R G+ +L GI VVGEA G +A++ +T DV L+D+ MP Sbjct: 10 IKVLVVDDHELFRRGVVTVLRSTPGIYVVGEAGNGREAIECFQTLQPDVTLLDIHMPVCN 69 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLE RK+ + + KI+MLTV + + +++GA+GY+ K +P+ ++ +R VY G Sbjct: 70 GLETARKMREANPNTKILMLTVSETEEMLFEAVKSGASGYVLKSVSPERLIECVRQVYEG 129 Query: 122 QRYIASDIAQQMALSQIEPEKTESP----FASLSERELQIMLMITKGQKVNEISEQLNLS 177 + + S +A +M +T P L+ERE +++ ++ G EI+ L +S Sbjct: 130 EPVVPSSLAMKMIAEFSRTAETRMPSSESVTELTEREREVLQYLSAGASNKEIARALFIS 189 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLSSQ 218 TV ++ + KL++ + A+R+G+ L+S Sbjct: 190 ENTVRNHVRHILDKLHLSNRAQAAAYAVRNGIARGRQLTSD 230 >UniRef50_C7RBI1 Two component transcriptional regulator, LuxR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBI1_KANKD Length = 212 Score = 283 bits (726), Expect = 3e-75, Method: Composition-based stats. Identities = 66/211 (31%), Positives = 122/211 (57%), Gaps = 1/211 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI V+L DDH ++R G+ +L VV EAS G +AV+ V ++D+SMP + Sbjct: 1 MIRVMLADDHTILRQGLVSLLSKDADCTVVAEASNGLEAVEKALETRPQVAVIDISMPEL 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+E ++I + KI++LT+H E +++AGA+GYL K +A +E++ A++++ + Sbjct: 61 NGMEVVKRIHDKLPECKILVLTMHEEQEYVIHMVRAGASGYLLKDSASEELIDAVKALAT 120 Query: 121 GQRYIASDIAQQMALSQIEPEKT-ESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 G+ Y + A +A +P+K + P+ +L++RE ++ ++ G+ +I+ L++S K Sbjct: 121 GKTYYSQYAASVLATQYSQPDKEWQDPYKNLTQREREVFHLVVDGKTTKDIARTLDISVK 180 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 T ++R ++ KL + EL A +H L Sbjct: 181 TAENHRGKVLDKLGVSNTAELVRYAAKHNLL 211 >UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria RepID=Q2LSF1_SYNAS Length = 217 Score = 283 bits (726), Expect = 3e-75, Method: Composition-based stats. Identities = 73/215 (33%), Positives = 124/215 (57%), Gaps = 2/215 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 +NVLL DDH++VR G+R +LE + VV EA G+ + R ++++MD+SMP + Sbjct: 3 VNVLLADDHKIVRDGLRTLLETHGSMNVVAEAENGQKTITLARELHPEIIIMDISMPDMN 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++ATRKI +K+I L++H + +++AGA+GYL K A +E+V+AI++V S Sbjct: 63 GIDATRKITSDLPGIKVIALSMHADRHFVIGMLEAGASGYLLKDCAFEELVNAIQTVLSN 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESPF--ASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 Y++ IA + + + S + L+ RE +++ ++ +G +I+ L++S K Sbjct: 123 HTYLSPTIADIVVKNYVHKAAGTSVVVSSELTPRERELLQLLAEGLSAKQIAANLHVSVK 182 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 TV ++R + KL + EL AIR GL T Sbjct: 183 TVETHRRNITQKLGVGSVAELIKYAIREGLTTVGT 217 >UniRef50_A8MF72 Two component transcriptional regulator, LuxR family n=14 Tax=Clostridia RepID=A8MF72_ALKOO Length = 224 Score = 283 bits (725), Expect = 3e-75, Method: Composition-based stats. Identities = 71/211 (33%), Positives = 119/211 (56%), Gaps = 3/211 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 INVL+ DDH LVR G+++I+E IKV+G A+ GE+AV + + DVVL+D+SMP Sbjct: 11 INVLIADDHALVRQGLKQIIELEPDIKVIGLAADGEEAVLKTQQLSPDVVLLDISMPKQN 70 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++ R++ + +KIIMLT H + + + GA GY+ K A + ++ AIR VY G Sbjct: 71 GIQTLRRLKDMDSTIKIIMLTFHEDREYLFETINLGANGYVLKDAESESLIKAIRDVYQG 130 Query: 122 QRYIASDIAQQMALSQIEPE---KTESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 YI +A ++ E + + L+ RE +++ ++ +G EI + L +S Sbjct: 131 LNYIYPTLATELVKEFNRREVKSQKRNNEDELTRREYEVLTLLAEGINNKEIGDCLFISE 190 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 KTV ++ +F K+N++ + A +H + Sbjct: 191 KTVKNHVSNIFKKINVNDRTQAAIYAYKHNI 221 >UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfobacteraceae RepID=B8FFJ9_DESAA Length = 212 Score = 283 bits (725), Expect = 4e-75, Method: Composition-based stats. Identities = 85/212 (40%), Positives = 139/212 (65%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VLL DDH +VRAG+RRI+ED + IKV+ EAS G++A+ + DV ++D+SMPGI Sbjct: 1 MIRVLLADDHVIVRAGLRRIIEDSEDIKVIVEASNGKEAIDLTLEHCPDVAVVDISMPGI 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GLE ++ D+ +++LT+H E + ++AGA GY++K +AP+++V+AIR ++S Sbjct: 61 DGLEVVSRLHAELPDLPMLILTMHEEEQYVVRAIEAGAMGYMTKKSAPEQLVTAIRKLHS 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G R++ + A+ +AL K S SLS+RELQ++ + G EI++ ++S KT Sbjct: 121 GSRFLTEEAAELLALRVSRWSKGGSLLDSLSKRELQVLRHLASGHTNREIADSYHISVKT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 V++YR R+ KLN+ + +++ AI++ L N Sbjct: 181 VDTYRARLLKKLNLRNNADISRFAIQNNLINP 212 >UniRef50_A4J6C2 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=A4J6C2_DESRM Length = 218 Score = 282 bits (722), Expect = 7e-75, Method: Composition-based stats. Identities = 67/213 (31%), Positives = 120/213 (56%), Gaps = 3/213 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +L+ DDH L+R G+R+IL I VVGE + G+ AV +C N VD+VLMD++MP + Sbjct: 5 IKLLIADDHILIREGLRKILSIEPHISVVGEVTNGQQAVDYCLKNPVDIVLMDINMPIMN 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA R+I + ++ II LT+H ++ ++++ G +GY+ K P +++ I V G Sbjct: 65 GIEACRQIKKLNPNIGIIALTIHDQDEYLFELIKYGISGYVLKDIHPDQLIKTILGVAQG 124 Query: 122 QRYIASDIAQQMALSQIE---PEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 + +I + ++ + +E +L+ERE++++ + KGQ I+ L +S Sbjct: 125 ESFIPPSLTARVLAEFTRLSSGDYSEKKHLNLTEREIEVLKQVAKGQSNKAIANALYISE 184 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 KTV ++ +F K+ + + AI+ L + Sbjct: 185 KTVKNHLTNIFQKIGVADRTQAALYAIKEKLVD 217 >UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC6_SOLUE Length = 216 Score = 282 bits (722), Expect = 7e-75, Method: Composition-based stats. Identities = 72/213 (33%), Positives = 129/213 (60%), Gaps = 3/213 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +LL DDH +VR G+R +LE G +V+G+A+ G DAV + DVV+MD++MPG+ Sbjct: 4 IRILLADDHTVVRKGLRLLLESHPGFQVIGDAADGRDAVSLAGEHTPDVVVMDVAMPGLN 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA R+I+ I+ L++H++ K ++AGA YL K +A ++++A+ +V G Sbjct: 64 GIEAARQISAKLPHTAIVFLSMHSDESYVLKALKAGARAYLLKDSAEHDLIAAVIAVSEG 123 Query: 122 QRYIASDIAQQMA---LSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 + + + I++ + + Q++ + E + L+ RE +++ ++ +G+ E++ LNLS Sbjct: 124 KAFFSPAISKMLVEDYMRQMQERQIEDSYELLTTREREVLQLLAEGKNNKEVAAILNLSL 183 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 TV ++R + KLN+H EL AIR G+ + Sbjct: 184 YTVETHRGNILQKLNLHSGAELILYAIRKGVIS 216 >UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT Length = 220 Score = 282 bits (722), Expect = 8e-75, Method: Composition-based stats. Identities = 72/215 (33%), Positives = 126/215 (58%), Gaps = 3/215 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + VLLV+DH +VR G++ +L + ++VVGE + G AV+ A DVV+MD++MP + Sbjct: 5 VRVLLVEDHTIVREGLKALLTATEDLEVVGEVADGRAAVEAAERLAPDVVVMDINMPKLD 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ ATR+I ++++L+++ ++AGA+GYL KG+ ++V+AIR V G Sbjct: 65 GVGATREIREKVNAPRVLILSMYDGEEYVRPAIRAGASGYLLKGSGLSDLVTAIREVAGG 124 Query: 122 QRYIASDIAQQMALSQIEPE---KTESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 + + +A+ + + P SL++RE +++ ++ +G+ EI++ L LS Sbjct: 125 NAFFSPTVAKILLQESRGERSVKEAPDPADSLTKREREVLTLVGEGKSSPEIAKILGLSV 184 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 KT+ +R R+ +KL +H L AIR GL +AE Sbjct: 185 KTIEGHRGRIMAKLGVHNVAGLVRQAIRIGLVSAE 219 >UniRef50_Q1QVM5 Two component transcriptional regulator, LuxR family n=29 Tax=Gammaproteobacteria RepID=Q1QVM5_CHRSD Length = 214 Score = 282 bits (722), Expect = 8e-75, Method: Composition-based stats. Identities = 112/212 (52%), Positives = 154/212 (72%), Gaps = 2/212 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VL+ DDH LVR I R+L+ G+KV+ EA GE+AV R D+VLMD+ MPGI Sbjct: 1 MIKVLVADDHHLVRTSIARMLDSEDGLKVIAEAVDGEEAVNMARELRPDIVLMDIRMPGI 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GGLEATRKI R +D+K++++T E ++M AGAAG++SKG E+V AIR+++ Sbjct: 61 GGLEATRKIMRGMSDIKVVIVTAFLEEAFAQRLMDAGAAGFISKGTELDEMVRAIRAIFD 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 GQRYI+ DIAQ++ LS++ + ++PF LS RELQ+ +MI QKV++IS++L LSPKT Sbjct: 121 GQRYISPDIAQKVVLSKMGTQ--DNPFDQLSHRELQVAMMIVNCQKVSDISDRLFLSPKT 178 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 VN+YRYR+F KLN+ DVELTHL +R+GL + Sbjct: 179 VNTYRYRIFEKLNVQSDVELTHLGLRYGLIDG 210 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 281 bits (720), Expect = 1e-74, Method: Composition-based stats. Identities = 69/218 (31%), Positives = 117/218 (53%), Gaps = 4/218 (1%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 +LL DDH L R G+R +L ++V GEA+ DAV + DVVLMD+ M G+ Sbjct: 5 KILLTDDHTLFRQGVRTLLAAEADMEVAGEAANAMDAVALAQQLRPDVVLMDIGMAGMSS 64 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 EATR I + +VK+I L+++ + A+ + GA GY+ K + ++++AIR V G Sbjct: 65 FEATRLIRKERPEVKVIFLSMYDDEDYLAECVDMGANGYILKDSPADQLITAIREVQRGG 124 Query: 123 RYIASDIAQQMA----LSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 Y++ + ++ L F +L++RE +I+ M+ +G+ V EI+ LS Sbjct: 125 SYLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKEIAAFFELSV 184 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLS 216 KTV ++++ + KL+IH +L AI+ + + Sbjct: 185 KTVEAHKFNLMRKLDIHNKAQLVQYAIQKKIIRLPETT 222 >UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria RepID=Q3Z7M1_DEHE1 Length = 232 Score = 280 bits (718), Expect = 2e-74, Method: Composition-based stats. Identities = 62/218 (28%), Positives = 126/218 (57%), Gaps = 3/218 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI+++L DDH++VR G++ +LE +VVGEAS G +AV + V++ D+ M G+ Sbjct: 1 MISIVLADDHQIVRHGLKALLEAEADFEVVGEASDGIEAVNLVESLQPGVLVTDLMMGGM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+E T ++ + + +++L+++ + ++AGA Y+ K + +E+V ++R Sbjct: 61 SGIEVTYQVVKRSPKTAVVILSMYGNEAYVHEALRAGARAYVLKDSTSEELVRSVREAVQ 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTE---SPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 G RY++S ++++ + +E P+ +L+ RE +++ ++ +G EI+E+L +S Sbjct: 121 GHRYLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAERLFIS 180 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETL 215 P+TV +R M KL++ +L A++ G+ E + Sbjct: 181 PRTVEVHRANMMRKLDLRNQTQLLRYALQRGIIPPENM 218 >UniRef50_B8FDP3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDP3_DESAA Length = 219 Score = 280 bits (718), Expect = 2e-74, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 131/211 (62%), Gaps = 2/211 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +L+ +DH LVR G++ ++ +VVGEA G A++ R D++L+D+SMP + Sbjct: 6 IKILITEDHALVRKGLKSLISSRSEFQVVGEADNGLAAIEMTRKCKPDLILLDLSMPKMN 65 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GL R++ + +VKI+++T+H ++ GA GYL KG PQE+ AIR++ G Sbjct: 66 GLATMRQLKKERPEVKILVITMHASQDYLIPALKEGADGYLLKGDDPQELFMAIRAIMDG 125 Query: 122 QRYIASDIAQQMALSQIEPEKTE--SPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 + Y++SD++ Q+ S I P+ E P ASL++RE ++ ++ +G +I++ L +SPK Sbjct: 126 KAYLSSDLSGQLIHSVINPDTREAADPLASLTQREKEVFQLVAEGNTNQQIADLLFISPK 185 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 TV+ +R + KL++H E+++ A+++G+ Sbjct: 186 TVDKHRTNLMKKLDLHSAREVSNFALKNGII 216 >UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ Length = 218 Score = 280 bits (717), Expect = 3e-74, Method: Composition-based stats. Identities = 70/217 (32%), Positives = 125/217 (57%), Gaps = 7/217 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMP-GI 60 + +++ DDH +VR G IL + ++VV A+ G +A + + DV+++D+SMP G Sbjct: 1 MKIVIADDHAVVRTGFSMILNYQEDMEVVATAADGVEAYQKVLEHRPDVLILDLSMPPGE 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GL AT KI+ S D KI++LT+ + V+++GA GY+ K + ++++ A+R+VY Sbjct: 61 SGLIATSKISESFPDTKILILTMFDDEEYLFHVLKSGAKGYILKNSPDEQLILAVRTVYQ 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTE------SPFASLSERELQIMLMITKGQKVNEISEQL 174 G+ Y+ + + + +T+ PF LS+REL+I+ +I KG +I+E+L Sbjct: 121 GETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNKDIAEKL 180 Query: 175 NLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 +S KTV +++ + +KLN+ EL A++ L Sbjct: 181 FVSVKTVEAHKTHIMTKLNLKSKPELVEYALKKKLLE 217 >UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Tax=Firmicutes RepID=LIAR_BACSU Length = 211 Score = 279 bits (716), Expect = 4e-74, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 124/211 (58%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VLL+DDHE+VR G+ LE I+V+GEAS G + V+ + DV+LMD+ M G+ Sbjct: 1 MIRVLLIDDHEMVRMGLAAFLEAQPDIEVIGEASDGSEGVRLAVELSPDVILMDLVMEGM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EAT++I R +D KII+LT ++ V++AGA YL K + E+ AIR+ Sbjct: 61 DGIEATKQICRELSDPKIIVLTSFIDDDKVYPVIEAGALSYLLKTSKAAEIADAIRAASK 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+ + S +A ++ + P SL++REL+I+ +I +G+ EI E+L ++ KT Sbjct: 121 GEPKLESKVAGKVLSRLRHSGENALPHESLTKRELEILCLIAEGKTNKEIGEELFITIKT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V ++ + SKL++ + A R+ L N Sbjct: 181 VKTHITNILSKLDVSDRTQAAVYAHRNHLVN 211 >UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B1ZVM0_OPITP Length = 219 Score = 278 bits (714), Expect = 7e-74, Method: Composition-based stats. Identities = 77/214 (35%), Positives = 129/214 (60%), Gaps = 2/214 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + ++L DDH LVRAGIR +LE + G+ +VGEA G + V T A D+ +MD++MPG+ Sbjct: 5 LKIVLADDHALVRAGIRTLLEKLPGVTIVGEAGDGRETVTLVHTFAPDIAIMDITMPGLN 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G +AT +IAR K+++L++HT + ++AGA GYL K AA E+ A+ +V G Sbjct: 65 GFDATARIAREHPRTKVLILSMHTAEDYVLQALRAGATGYLLKDAATAELQLALNAVRKG 124 Query: 122 QRYIASDIAQQMA--LSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 + Y++ I++ + Q E + P +L+ R +I+ +I +G+ EI+ LNLS K Sbjct: 125 ETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIAFLLNLSVK 184 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 T+ ++R + ++L +H + A+R GL +A+ Sbjct: 185 TIETHRMHLMARLGLHDVAGVVRYALRTGLISAD 218 >UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobacteria RepID=Q5ZS73_LEGPH Length = 225 Score = 278 bits (714), Expect = 7e-74, Method: Composition-based stats. Identities = 107/218 (49%), Positives = 158/218 (72%), Gaps = 1/218 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 +I VL+VDDH LVR GIRR+LED+ + VV +A GE A+ + +T++ DVVL+DM MPGI Sbjct: 7 LIKVLIVDDHALVRMGIRRLLEDMSDVDVVADAESGEQALAYVKTHSPDVVLLDMKMPGI 66 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G E TR++ ++ ++K+I +T +PLP +V+Q GA GYL+K + +E+ +AIR V Sbjct: 67 DGWEVTRRLKKTNPNIKVIAVTAICSDPLPTRVLQLGAMGYLTKESGAEEMAAAIRKVAK 126 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G++Y++++IAQ+MA++ ++ E +SPF LSERE+Q+MLMIT G V +I+++L LS KT Sbjct: 127 GEKYLSAEIAQKMAINSLQ-ESQDSPFDLLSEREMQVMLMITSGMNVQDIADRLFLSSKT 185 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLSSQ 218 +N YRYRMF KL I DVELT+LA++H + SQ Sbjct: 186 INGYRYRMFEKLGIKNDVELTYLAMKHRIIEHPNDLSQ 223 >UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=Bacteria RepID=B4VFW8_9ACTO Length = 216 Score = 278 bits (713), Expect = 8e-74, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 122/210 (58%), Gaps = 1/210 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + VLLVDDH++VR G+R LE + I+VVGEAS GE+ + DV+LMD+ MPG Sbjct: 8 VRVLLVDDHQVVRRGLRTFLEVQEDIEVVGEASDGEEGIARAEELRPDVILMDIKMPGTD 67 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA R++ +++++T TE ++AGAAGY+ K P + AIRSV++G Sbjct: 68 GIEALRRLRELANPARVLIVTSFTEQRTVVPALRAGAAGYVYKDIDPDALAGAIRSVHAG 127 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + ++A + L+Q + + S +L++RE +++ I G+ EI+ L LS KTV Sbjct: 128 HVLLQPEVAVAL-LTQDDQGPSSSRGGALTDREREVLSHIADGRSNREIARALVLSEKTV 186 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++ + KL++ + A+RHG+ + Sbjct: 187 KTHVSNILMKLDVADRTQAALWAVRHGIGD 216 >UniRef50_B8GAC9 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexus RepID=B8GAC9_CHLAD Length = 213 Score = 278 bits (713), Expect = 8e-74, Method: Composition-based stats. Identities = 75/210 (35%), Positives = 122/210 (58%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 M +LLVDDH ++RAG+R +LE + VVGEA A+ T D++L+D+S+ Sbjct: 1 MSGILLVDDHAVLRAGLRLLLESQPDMVVVGEAEDSRTAITQATTLQPDLILLDLSLTNS 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GL A + + + +I++LT+H + + + AGA GY+ K AA E+++AIR+V Sbjct: 61 SGLAAIQSLRAAAPQARILVLTMHDDEGYVRQALAAGAHGYVLKRAADAELIAAIRAVLR 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+ YI + +++ + + +P+ SLSERE ++++++ +G EI+ QLNLSPKT Sbjct: 121 GELYIHPALTRRLLEDILPQPQPTNPWESLSEREREVLVLVARGYTAAEIAGQLNLSPKT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 V +YR R KL + L A+ H L Sbjct: 181 VETYRTRGMEKLGLRSRAALVQFALDHNLL 210 >UniRef50_A1WT06 Two component transcriptional regulator, LuxR family n=1 Tax=Halorhodospira halophila SL1 RepID=A1WT06_HALHL Length = 216 Score = 278 bits (713), Expect = 9e-74, Method: Composition-based stats. Identities = 97/214 (45%), Positives = 140/214 (65%), Gaps = 1/214 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI V+L DDH L+R I +L DI I++V A E AV R DVVLMD+ MPG+ Sbjct: 1 MIRVVLADDHRLIRQAIDGMLRDIPDIQIVAHAENAEHAVAAVREQEPDVVLMDLQMPGM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GG+EA R++ RS V +I LTV+ P PA ++AGA GY+ KGA E++ AIRSVY Sbjct: 61 GGVEAIRRLYRSHPKVGVIALTVYQSGPYPAHALRAGAKGYVHKGADRDELIEAIRSVYL 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+RYI ++A+ +AL+ ++ ESPF L+ RE ++++ I GQ+ I++ L LSPKT Sbjct: 121 GRRYICHEVARHVALNSLDGTG-ESPFDHLTPREFEVLMRILNGQRGTSIAKDLCLSPKT 179 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 V++YR R+F +L + D +LT +AI +GL A++ Sbjct: 180 VSTYRSRIFERLGVRNDAQLTRIAIDYGLLEAKS 213 >UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR family n=4 Tax=Bacteria RepID=D1C9Z8_SPHTD Length = 212 Score = 278 bits (713), Expect = 9e-74, Method: Composition-based stats. Identities = 72/212 (33%), Positives = 125/212 (58%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +L+VDDH +VR G+ ILE + + VVGEA G+ AV+ R DVVLMD++MPG Sbjct: 1 MIRILVVDDHPVVREGLVAILEAQEDLTVVGEAGDGDQAVQQYRDLKPDVVLMDLAMPGT 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G++A ++I R + ++++LT + + + +QAGA+GYL KGA +++ A+R VY Sbjct: 61 DGVQAIQEIKRIDPNARVVVLTAYDTDERILQAVQAGASGYLLKGAPREDIFRAVRVVYR 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G + +A ++ + + E L+ REL ++ ++ +G + EI+ +L+++ +T Sbjct: 121 GGSLLEPVVAGKLLNRMGDLLRGEPVEEELTARELDVLTLMARGLRNKEIAYELSITERT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 V + ++ KL++ G E AI+ GL Sbjct: 181 VKFHANAIYRKLDVSGRTEAVSKAIQRGLVRP 212 >UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=Q2RMH6_MOOTA Length = 221 Score = 278 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 70/218 (32%), Positives = 125/218 (57%), Gaps = 5/218 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSM-PGI 60 I V+LVDDH LVR G+R +LE I+VVGE + + +VV+MD+ + G Sbjct: 3 IRVMLVDDHALVREGLRALLEREGDIEVVGETGSAAGVLALAEESRPEVVVMDLQLGAGR 62 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EATR++ ++K+++L+++ + L + +++GA GY+ K A +E+ +AIR V Sbjct: 63 NGVEATRELVEKKPEIKVVILSMYDDEELVFRALESGARGYVLKRAGIEELTTAIRLVAR 122 Query: 121 GQRYIASDIAQQMALSQIEP----EKTESPFASLSERELQIMLMITKGQKVNEISEQLNL 176 G+ Y+ IA+++ E + L+EREL+++ + +G EI+ +L + Sbjct: 123 GEAYLDPQIARRVIEGLQERLPFTRASRPEGPELTERELEVLRLAAEGLTNAEIARRLVI 182 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 S KTV ++R + KL +H V+L AI++G+ ++ Sbjct: 183 SVKTVQAHRANIMQKLGLHDRVDLVKYAIKNGILKLDS 220 >UniRef50_C1TQ52 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQ52_9BACT Length = 214 Score = 278 bits (712), Expect = 1e-73, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 123/210 (58%), Gaps = 1/210 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +LL DDH+++R G++ +L + ++VV EA GE+A+ DV +MD+ MP + Sbjct: 3 IKILLADDHKILREGVKALLNRQEDMEVVAEAGNGEEALSIAGEIRPDVTVMDVMMPQMD 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR+I + +++ L+++ + +++++ GA G+L K A E+V A+R V G Sbjct: 63 GIEATRRIVEDGSS-RVVALSMYADRSFVSEMLKVGALGFLLKDCASTELVEAVRKVMDG 121 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + Y+ I+ +A + L+ RE +I++++ +G E++E+L+LS KTV Sbjct: 122 EIYLGPSISHIVAKLYVSSLHDPDDIEPLTPREKEILMLLAEGNTNREVAERLHLSIKTV 181 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++R + +KL + +L AIR+G+ + Sbjct: 182 GTHRQHIMNKLKLKNLADLVKYAIRNGMIS 211 >UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillaceae RepID=A0RDP4_BACAH Length = 221 Score = 278 bits (712), Expect = 1e-73, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 123/207 (59%), Gaps = 2/207 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +LLV+DH +VR G+ L+ + ++VGEA GEDA+ + RT DVVLMD+SMP + Sbjct: 15 IKLLLVEDHHIVRRGLVFFLKTREEFEIVGEAENGEDALTFVRTERPDVVLMDLSMPKMD 74 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EAT++I + +KI++L+ +E ++AGA GY K P+++V++I ++Y G Sbjct: 75 GIEATKQIKQYDETIKILILSSFSEQDYVLPALEAGADGYQLKEVQPEQLVASIIAIYEG 134 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + + K E+PF+ L++RE +++ I KG+ EI+ +L+++ +TV Sbjct: 135 NANFHPKVTPALL--GRSAVKKENPFSMLTKREQEVLQEIAKGRSNKEIAAELHITEQTV 192 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHG 208 ++ + +KL + + A++HG Sbjct: 193 KTHVSNILAKLEVDDRTQAALYAVKHG 219 >UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37 Tax=Bacteria RepID=D1AEE5_THECD Length = 244 Score = 278 bits (712), Expect = 1e-73, Method: Composition-based stats. Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 6/216 (2%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRT-----NAVDVVLMDMSM 57 +LL DDH LVR G+R IL+ + VVGEA G +A++ R VD+ ++D++M Sbjct: 29 RILLADDHALVRRGVRLILDGEPDLWVVGEAGDGAEAIEQVRRRAGTPQEVDLAVLDVAM 88 Query: 58 PGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRS 117 P + GL+A R+++R ++I++LT+H + ++AGAAGY+ K A +++V A R+ Sbjct: 89 PRMTGLQAARELSRMYPRLRILILTMHDNEQYLFEALKAGAAGYVLKSLADRDLVQACRA 148 Query: 118 VYSGQRYIASDIAQQMALSQIEPEKT-ESPFASLSERELQIMLMITKGQKVNEISEQLNL 176 G+ ++ + S +E + E P L+ RE +I+ ++ +G EI++ L + Sbjct: 149 AVRGEPFLYPGAISVLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSREIADTLFI 208 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 S KTV +R + +KL + +ELT AIR GL Sbjct: 209 SVKTVERHRANILAKLGMKDRLELTRYAIRTGLIEP 244 >UniRef50_D0LYS4 Two component transcriptional regulator, LuxR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS4_HALO1 Length = 212 Score = 277 bits (711), Expect = 2e-73, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 129/211 (61%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI + + DDH L+R G+RR+L + I+VVGEAS G +AV+ + A DV+L+D++MP Sbjct: 1 MIKIAIADDHALLREGMRRMLSQSELIEVVGEASNGAEAVEVVKEKAPDVLLLDITMPVK 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EAT I + KI++L++H + + ++AGA G++SKGA +E++ AI V+ Sbjct: 61 DGIEATADILALNVNTKILILSMHADEQYALRTLRAGANGFISKGARLEELLKAITDVHE 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 GQRY+ IA A I P+ + +LS+RE Q+M + +G EI+ L +S KT Sbjct: 121 GQRYLPDKIATSFAERHIRPDAEKPLVETLSKREFQVMTHLAQGMTNREIAGVLQISVKT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V+++R + KL + + ++T AI+HG Sbjct: 181 VDTHRSHVLKKLELRNNSDITRFAIQHGYIQ 211 >UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Actinobacteria (class) RepID=D2AX12_STRRD Length = 239 Score = 277 bits (710), Expect = 2e-73, Method: Composition-based stats. Identities = 67/215 (31%), Positives = 114/215 (53%), Gaps = 4/215 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+VDD LVR G+ IL +VVGEA G AV R DVV+MD+ MP + Sbjct: 11 IRVLIVDDQPLVRRGLSLILSPDPSFEVVGEAENGAQAVTLARRLRPDVVVMDIRMPVLD 70 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ ATR++A + D +++ L+ + ++AGA G+L K ++P+++ +AIR+V++G Sbjct: 71 GVGATRELAATVPDCRVLALSTFDLDEYVVGALRAGAYGFLPKDSSPEDLSAAIRTVHAG 130 Query: 122 QRYIASDIAQQMALSQIEPEKTESP----FASLSERELQIMLMITKGQKVNEISEQLNLS 177 + +A + ++ + + P L+ RE+++ ++ G IS L++S Sbjct: 131 EAAVAPRLLTRLISTYVRAPHGTRPTPTGLGELTPREVEVWRLMATGLDNTGISRTLDIS 190 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 TV +Y +F KL + + +A GL A Sbjct: 191 LSTVKNYITSIFDKLAVRDRAQAVIVAYESGLVTA 225 >UniRef50_B9XL75 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XL75_9BACT Length = 234 Score = 277 bits (710), Expect = 2e-73, Method: Composition-based stats. Identities = 77/215 (35%), Positives = 127/215 (59%), Gaps = 3/215 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLL DDH +VR G+ L +++ I++VGEA G++ V R + ++VLMD+ MP + Sbjct: 19 IKVLLADDHPVVRKGLGSCLNNLEHIEIVGEAVDGQETVSKVRELSPEIVLMDLDMPTMS 78 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLEAT+ I R VK+++L++HT +++++GA GY+ K A E+V AI SV+ G Sbjct: 79 GLEATKIIRREFPLVKVLILSIHTNKDYVLQIIKSGAQGYVLKDAPLTELVRAIESVHGG 138 Query: 122 QRYIASDIAQQMALSQIEPE---KTESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 + + DI+Q M + + L+ RE +++ MI +GQ E++ ++ + Sbjct: 139 GAFFSPDISQIMLDQYLAEATNGEESGNSKKLTNRETEVLSMIAEGQSNKEMASRMGVGV 198 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 +TV ++R R+ +KL+IH LT AI HG+ E Sbjct: 199 RTVETHRERVMNKLDIHNVAGLTKYAIAHGIIKLE 233 >UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM Length = 216 Score = 277 bits (709), Expect = 3e-73, Method: Composition-based stats. Identities = 76/209 (36%), Positives = 122/209 (58%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+VDDH L+R+G+R +L + I+VVGEA+ G + + DVVL+D+SMP + Sbjct: 4 IKVLIVDDHTLMRSGLRLMLSAQEDIEVVGEAADGSGGIAMAQKMRPDVVLLDISMPEMS 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLE + + + D+++I+LT+H + + GA GY+ K AA + A+R+VYSG Sbjct: 64 GLECLKTLLANQPDLRVILLTMHEDARYVKEGFALGAMGYVLKKAADDVLYQAVRAVYSG 123 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + YI I + + E + + LS++E +++ +I G EI+EQL +S KTV Sbjct: 124 EMYIQPSITKAVVAELTERPRADDLRKPLSDQEKKVLSLIAAGYANREIAEQLVISVKTV 183 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 +Y+YR+ KLN +L A+ +GL Sbjct: 184 ETYKYRIMEKLNCKKRSDLVKFALDNGLL 212 >UniRef50_B3PFS2 GacA n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PFS2_CELJU Length = 217 Score = 277 bits (709), Expect = 3e-73, Method: Composition-based stats. Identities = 110/216 (50%), Positives = 147/216 (68%), Gaps = 1/216 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 M +L+VDDH+LVR GI R+L DI G +VVG+A GE+AV R DVVLMD+ MPG+ Sbjct: 1 MTKILVVDDHDLVRMGIVRMLADIDGYQVVGDAKSGEEAVTKARILKPDVVLMDVKMPGM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GGLEAT+K+ +KII +T ++ P ++MQAGA GY++KGA E+ AI V Sbjct: 61 GGLEATKKLLTVNPAIKIIAVTACDDDLYPTRLMQAGAVGYVTKGADFTEITDAINKVTR 120 Query: 121 GQRYIASDIAQQMALSQIEPE-KTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 G Y+++ IAQQ+AL ESPF LS+RELQ ++I GQKVN+I+ +SPK Sbjct: 121 GDLYMSNSIAQQLALRTFSGANNQESPFEKLSQRELQTAMLIANGQKVNDIANTFCVSPK 180 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETL 215 TVNSYRYR+F KL+I+ DVELT LA++H L + E + Sbjct: 181 TVNSYRYRIFEKLDINSDVELTLLAVKHNLLDPEAV 216 >UniRef50_B9XC41 Two component transcriptional regulator, LuxR family n=7 Tax=Verrucomicrobia RepID=B9XC41_9BACT Length = 267 Score = 276 bits (708), Expect = 3e-73, Method: Composition-based stats. Identities = 82/215 (38%), Positives = 128/215 (59%), Gaps = 5/215 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLL DDH +VR G+R +L K I++VGEA G +AV+ + DV+LMD++MP + Sbjct: 31 IRVLLADDHTVVRQGLRALLSGEKDIQIVGEAGTGREAVQMAQKLTPDVILMDIAMPLMN 90 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLEATRKIA K+++L+ + E+ K+ +AGA+GYL K AA ++V+A+R + G Sbjct: 91 GLEATRKIAEVAPSAKVLVLSSYGEDDYVQKLTEAGASGYLIKHAAANDLVAAVRETHKG 150 Query: 122 QRYIASDIAQQMALS----QIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 + + IA+++ T++ F L+EREL+ + I G+ I+ + +S Sbjct: 151 NAFFSPGIAKRLRDQVRAGFANGNGTKASFE-LTERELETLGHIVAGKPNKVIACDMGIS 209 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 KTV +R ++ +KLNIH LT AI G+ +A Sbjct: 210 IKTVEKHRQQVMNKLNIHEVASLTRYAIAKGMIDA 244 >UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=Gammaproteobacteria RepID=A5F1Q5_VIBC3 Length = 216 Score = 276 bits (708), Expect = 3e-73, Method: Composition-based stats. Identities = 78/210 (37%), Positives = 118/210 (56%), Gaps = 2/210 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V++VDDH++V G LE I+VV AS G +A++ + + DVVLMD+SMP + Sbjct: 9 IRVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSMPIMN 68 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR I K++MLT+H +VMQAGA GY+ K + ++V AI++V+ G Sbjct: 69 GIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKTVHQG 128 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Y + +I P + LS RE I+ M+ +G +I+ LN+S +TV Sbjct: 129 ATYFCESTTSTLFSQEILPVANKP--NPLSRREEAILRMVAQGCSSKKIATLLNISYRTV 186 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++R + KL+IH EL A++HGL Sbjct: 187 ETHRQNIKHKLDIHSTAELAQYALQHGLLE 216 >UniRef50_C6BTX3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTX3_DESAD Length = 217 Score = 276 bits (708), Expect = 3e-73, Method: Composition-based stats. Identities = 80/212 (37%), Positives = 127/212 (59%), Gaps = 2/212 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLLVDDH++VR G+R L IKVVGEA+ G++AV+ + D++LMDM MP + Sbjct: 5 IKVLLVDDHDIVRIGVRSFLGSFDDIKVVGEAANGQEAVEMTAELSPDIILMDMLMPVMD 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++A R+I +II LT + ++AGA GYL K + P E++ AIR V+ G Sbjct: 65 GIQAIREIRDRKLPGRIIALTSFATDDKLFPAIKAGAMGYLLKDSTPDELLEAIRRVHRG 124 Query: 122 QRYIASDIAQQMALSQIEP-EKTESPF-ASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 + +A DIA+++ +P E +E+P L+ REL + ++ KG+ I+E++ +S Sbjct: 125 EPSLAPDIARKVLSELSQPGEDSETPTPDPLTPRELDTLKLVAKGKSNKAIAEEMFVSEA 184 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 TV ++ + SKL++ VE T A+R G+ + Sbjct: 185 TVRTHMTSILSKLHLANRVEATLYALREGIAS 216 >UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=C7QHJ1_CATAD Length = 222 Score = 276 bits (708), Expect = 4e-73, Method: Composition-based stats. Identities = 66/211 (31%), Positives = 116/211 (54%), Gaps = 1/211 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +L+VDDH +VR G+R + + G +VVGEAS G A+ + DVVLMD+ MP +G Sbjct: 12 LRLLIVDDHPIVRDGLRGVFDGEDGFEVVGEASDGAQALVRAAESGPDVVLMDLRMPTMG 71 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA R++ V++++LT + ++AGA GYL K A ++++ A+R+ +G Sbjct: 72 GVEAIRRLRVEQPAVRVLVLTTYDTESDVLPAIEAGATGYLLKDAPREDLIRAVRAAAAG 131 Query: 122 QRYIASDIAQQMALSQIEP-EKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 Q +A +AQ++ P + P +L+EREL+++ ++ G E + +L +S T Sbjct: 132 QPVLAPTVAQRLMTRVQTPLAEPAPPGDALTERELEVLRLVASGTTNRETARKLFISEAT 191 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V ++ ++K + A + GL Sbjct: 192 VKTHLLHAYAKFGVRDRAAAVAEAYKRGLLK 222 >UniRef50_D1AAU8 Two component transcriptional regulator, LuxR family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AAU8_THECD Length = 220 Score = 276 bits (707), Expect = 4e-73, Method: Composition-based stats. Identities = 76/209 (36%), Positives = 127/209 (60%), Gaps = 2/209 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+ DDH + R G+R +LE + G++VVGEA G AV+ DVV+MD+ MPG Sbjct: 10 IRVLITDDHPVFRQGLRGLLEAL-GVEVVGEAESGPQAVQLAAELQPDVVVMDLHMPGGN 68 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR I R++ + +++LT+ ++ M+AGA GYL K + +E+ A+R+V +G Sbjct: 69 GIEATRTITRTSPRIGVLVLTMFRDDDSVFAAMRAGARGYLLKESGAEEIARAVRAVAAG 128 Query: 122 QRYIASDIAQQMALSQIE-PEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 + +IA+++ + P+ ++ F L+ERE +++ +I +G+ EI++ L LSPKT Sbjct: 129 EAIYGPEIARRVLTYFADMPDPKQTAFPELTEREREVLQLIAQGRSNGEIAQTLFLSPKT 188 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 V ++ +F KL++ + LA GL Sbjct: 189 VRNHVSNIFMKLHVADRAQAIVLAREAGL 217 >UniRef50_C7MUJ2 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=101 Tax=Bacteria RepID=C7MUJ2_SACVD Length = 239 Score = 276 bits (707), Expect = 4e-73, Method: Composition-based stats. Identities = 70/219 (31%), Positives = 118/219 (53%), Gaps = 7/219 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + V+L DD +LVRAG R IL GI+VVGEA G +AV+ DVVLMD+ MP + Sbjct: 21 LRVVLADDQDLVRAGFRVILSSDDGIEVVGEAGDGWEAVEVATRERADVVLMDVQMPKLD 80 Query: 62 GLEATRKIA----RSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRS 117 GLEATR++ K+I+LT + ++AGA+G+L K A+P++++ ++R Sbjct: 81 GLEATRRLLGPAGADHP-TKVIILTTFDREDYLFEALRAGASGFLLKNASPEDLIESVRI 139 Query: 118 VYSGQRYIASDIAQQMALSQIEPE--KTESPFASLSERELQIMLMITKGQKVNEISEQLN 175 V G ++ ++ +++ P + L++RE +++ ++ KG EI+ QL Sbjct: 140 VARGDALLSPEVTRRVIARFSAPAVTGPTRRPSELTDREFEVLSLLAKGASNAEIARQLV 199 Query: 176 LSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 L TV ++ R+ +KLN+ A +G+ + Sbjct: 200 LGETTVKTHVSRILTKLNLRDRTHAVVFAYENGIVTPGS 238 >UniRef50_Q1H354 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=Q1H354_METFK Length = 213 Score = 276 bits (707), Expect = 5e-73, Method: Composition-based stats. Identities = 83/211 (39%), Positives = 131/211 (62%), Gaps = 2/211 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I ++LVDDHE+VR+G+RR+LE G++V+ EA GE A ++ + DV++MDMSMPG+G Sbjct: 5 IRIMLVDDHEVVRSGLRRLLEQNDGVEVIAEADSGEQAYQFYGEHMPDVIVMDMSMPGMG 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLEA R+I ++I+ ++H ++ + AGA Y++K A ++V A+R V G Sbjct: 65 GLEALRRIIARYPQARVIIFSMHENAAFASQALGAGARAYVAKSGAADDLVQAVREVAQG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + Y++ IAQQ+AL + ++ P LS RE ++ ++ G+ V EIS L +S KTV Sbjct: 125 KGYLSPGIAQQIALQTLS--GSDDPTRLLSAREFEVFRLLAAGKGVEEISTILKISQKTV 182 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 +Y+ + KL I +EL LAI+HG+ Sbjct: 183 ANYQTLLKQKLGITSPIELVRLAIKHGVIEG 213 >UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteria RepID=C1F9F6_ACIC5 Length = 213 Score = 275 bits (706), Expect = 6e-73, Method: Composition-based stats. Identities = 66/212 (31%), Positives = 119/212 (56%), Gaps = 8/212 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +L+VDDH +VR G+ +L + G +V+ EA G +A+ R + D+ +MD+ +P + Sbjct: 10 IRILVVDDHHIVRQGLVALLNTLPGFEVIAEAGDGVEAIALHREHQPDITIMDLRLPRMN 69 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA +I + +I++LT + + +QAGA GYL KG ++ +AIRSV++G Sbjct: 70 GVEAITRIREESPGARIVVLTTFDGDEDIYRALQAGARGYLLKGMDADDLTAAIRSVHAG 129 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + I + +A+++A E L+ REL ++ +I +G+ EI+ L++S TV Sbjct: 130 KSRIPTVVAERLAERMSGSE--------LTARELDVLRLIVQGRSNREIAADLHISEATV 181 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 ++ + SKL + + A++ GL + E Sbjct: 182 KTHINNLLSKLGVSDRTQAATTALQRGLVHLE 213 >UniRef50_A5WFD3 Two component transcriptional regulator, LuxR family n=3 Tax=Psychrobacter RepID=A5WFD3_PSYWF Length = 211 Score = 275 bits (705), Expect = 8e-73, Method: Composition-based stats. Identities = 96/212 (45%), Positives = 146/212 (68%), Gaps = 1/212 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VL+VDDH+LVR GI R+L D I+V+GEA GE A++ + + DVVL+D++MP I Sbjct: 1 MIKVLVVDDHDLVRMGISRMLADDPEIEVIGEADSGEAAIRMVKALSPDVVLLDVNMPNI 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GG+E T+++ + VKI+ ++ + P P+ +++AG GY++KG E++ AI+ VY Sbjct: 61 GGVETTKRLRQFDEKVKILAVSSVSSQPYPSMLLKAGVNGYITKGTPLDEMIKAIKKVYQ 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G +Y +SD+A+Q+A + + ESPF LSERE Q+ +M+ Q +I++QL +S KT Sbjct: 121 GSKYFSSDVAEQLADMLL-TDNEESPFDRLSEREKQVAMMVVNCQSPQQIADQLFVSVKT 179 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 VN+YRYR+F K+ + DV+LTHLA+RHGL Sbjct: 180 VNTYRYRIFEKVGVDSDVKLTHLAMRHGLITP 211 >UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD Length = 217 Score = 275 bits (705), Expect = 8e-73, Method: Composition-based stats. Identities = 75/213 (35%), Positives = 129/213 (60%), Gaps = 4/213 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + ++L DDH ++RAG++ +L ++V+GEAS GE+A+ D+VL+D++MP + Sbjct: 5 LRIVLADDHAVLRAGLKVLLNAEPDLEVIGEASDGEEAIDRVDDLHPDLVLLDLTMPKLN 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++ ++ + AD+KI++LT+H + V+Q GA GY+ K AA E++SAIR+V G Sbjct: 65 GVDCIEELLKKHADLKILVLTMHDDEEYLKAVLQVGAKGYVLKKAADVELLSAIRTVARG 124 Query: 122 QRYIASDIAQ----QMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 + +I +A + +S EPEK LSEREL+++ + G +I++ L++S Sbjct: 125 EMFIYPTMAAEFVYRHLVSPREPEKESKKLKQLSERELEVLRNLALGHTNQDIADLLHVS 184 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 KTV +Y+ R+ KL +H EL A+ +G+ Sbjct: 185 VKTVETYKARVMEKLEMHKRAELVRYAMENGII 217 >UniRef50_D1C1C8 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1C1C8_SPHTD Length = 237 Score = 275 bits (704), Expect = 1e-72, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 119/212 (56%), Gaps = 2/212 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I+VLLVDDH L R +R +LE I+V+GEA G A + DV+LMD+SMPG+ Sbjct: 23 ISVLLVDDHVLFRQALRHLLEAEPDIRVIGEAGDGRSAQQLAERFHPDVILMDISMPGVD 82 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ ATR + + KII+LT+ E+ + ++AGA YL K + +V+ AIR+V G Sbjct: 83 GVTATRDLKAGIPNTKIIILTMFAEDGHVIRAIRAGADAYLLKNSESSKVIDAIRAVARG 142 Query: 122 QRYIASDIAQQMA--LSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 + I +A ++ +I + E A L+ERE+Q++ ++ G EI+ +L+L+ Sbjct: 143 ESVIEPQLATKLLNEFRRISEFREEETVAGLTEREIQLLRLVASGMSNKEIAAELSLAES 202 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 TV + +F KL++ + A+ HGL Sbjct: 203 TVKNRLSLLFEKLDVKDRTQAAIYALSHGLIT 234 >UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFI8_DESAH Length = 220 Score = 274 bits (703), Expect = 1e-72, Method: Composition-based stats. Identities = 74/211 (35%), Positives = 120/211 (56%), Gaps = 3/211 (1%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 +L+ DDH +VR G+R +LE KG++V A G AV D+V+MD++MP + G Sbjct: 4 RILIADDHAIVREGLRVLLER-KGLEVPWMAENGRQAVCLAVKFKPDIVIMDITMPNMNG 62 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 AT KI ++ ++I L++H + ++ AGA Y+ K +A E+ AI++V G+ Sbjct: 63 SIATEKIMQALPRTRVIALSMHADRRYIDRMFNAGAIAYVLKDSAFAELFDAIQAVGRGK 122 Query: 123 RYIASDIAQQMALSQIEPEKTES--PFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 YI+ IA+ +A S T PF +S RE +++ +I +G K +I+E+L +S KT Sbjct: 123 YYISPSIAKTLADSCTSAPDTPQKCPFGRISPREREVLQLIAEGVKTRQIAERLFVSIKT 182 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V ++R + +KL I LT AI+ GL + Sbjct: 183 VEAHRRNIMNKLMISSVAGLTRFAIQEGLVS 213 >UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax=Bacillales RepID=DEGU_BREBE Length = 236 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 62/225 (27%), Positives = 113/225 (50%), Gaps = 15/225 (6%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I ++++DDH+L R G++RIL +VV + GE+AV+ DV+LMD++MP + Sbjct: 10 IQIVIIDDHQLFREGVKRILAMEPEFEVVADGEDGENAVELVEKYNPDVILMDINMPKVN 69 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR + + DVK+++L++H + V++ GA+GYL K ++ A++ V G Sbjct: 70 GVEATRDLIQRYPDVKVLVLSIHDDESYVTHVLKTGASGYLLKEMDADALIEAVKVVAQG 129 Query: 122 QRYIASDIAQQMALSQIEPEKTES---------------PFASLSERELQIMLMITKGQK 166 YI + + + P L+ RE +++ ++T G Sbjct: 130 GAYIHPKVTHNLIKEYRRLVNEDEQESSEIGFKEVEYRKPLHILTRRECEVLQLMTDGYS 189 Query: 167 VNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 I E L +S KTV ++ + K+N++ + +I++G Sbjct: 190 NRMIGEALYISEKTVKNHVSNILQKMNVNDRTQAVVESIKNGWVK 234 >UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH Length = 211 Score = 273 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 121/209 (57%), Gaps = 4/209 (1%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 VL+ DDH+LVR GI ++LE + IKVVGEA G + VK R + D+VL+D++MP +GG Sbjct: 5 KVLVADDHDLVREGICKLLELYEDIKVVGEAGDGLETVKGVRDHFPDLVLLDLNMPRMGG 64 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 + A +KI + +K+++LT+H E +V+++GA GY+ K P+E+ AI V G Sbjct: 65 ITAIKKIKEISPGIKVLILTIHDEEEYVYEVIRSGAEGYIQKDVKPEELKRAIDKVIKGD 124 Query: 123 RYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVN 182 + ++ E + LS RE +++ ++ +G +I+++L +S KTV Sbjct: 125 KVFPRSTENEV----REVVNEKYEVCELSSREQEVLELLAQGMSNKQIAQELFISEKTVK 180 Query: 183 SYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++ + KL+++ + +A++ GL + Sbjct: 181 NHVSNILRKLSVNDRTQAVIVALKRGLVS 209 >UniRef50_A5G586 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=A5G586_GEOUR Length = 226 Score = 273 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 75/214 (35%), Positives = 120/214 (56%), Gaps = 2/214 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLLVDDH+++R G++ IL I+VV EA+ G +A++ DVV+MD++MP + Sbjct: 13 IRVLLVDDHKIMRKGLKAILALEHTIEVVAEAANGREAIRKADELLPDVVVMDLTMPEMN 72 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA R+I + DV+ ++L++ + + +AGA GYL K A +E+V AI +V SG Sbjct: 73 GIEAIRQIVAAHPDVRTLVLSMVLDRACVMETFKAGATGYLLKDCAVEELVGAIHTVASG 132 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFA--SLSERELQIMLMITKGQKVNEISEQLNLSPK 179 + Y+ I + + S + LS+RE +++ +I G EI+ +S K Sbjct: 133 EPYLCPQITSLVIRDYTKGADANSSDSCVQLSKREREVLQLIANGNSTKEIAFTFGVSIK 192 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 TV R + KLN+ +LT A+R GL + E Sbjct: 193 TVAVQRMSVMKKLNLFNVADLTKYAVREGLTSIE 226 >UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1R6_THERP Length = 221 Score = 273 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 86/216 (39%), Positives = 125/216 (57%), Gaps = 4/216 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLL DDH +VR G+R +LE I VVGEA ++AV+ RT DV ++D+SMPG Sbjct: 6 IRVLLADDHPIVRVGLRALLEAEPDIAVVGEAGTADEAVELARTLQPDVAVLDISMPG-N 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLEA R+IA + ++LTVH E V+QAG +GY+ K + ++V AIR V G Sbjct: 65 GLEALRRIASLGLPTRTLILTVHAEERYLLPVLQAGGSGYVRKSSLHTDLVEAIRLVARG 124 Query: 122 QRYIASDIAQQMALSQIEPEKT---ESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 + +I A+ + ++ +T + P LSERE +++ + G EI++QL LSP Sbjct: 125 EVFIDQAAARTLLQGYLDHARTGEVQDPAQLLSEREREVLRLTAAGYTAQEIADQLFLSP 184 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 KTV +YR+R+ KL EL A+R GL + + Sbjct: 185 KTVETYRHRVMQKLGFSRRSELVRFALRIGLLDPQA 220 >UniRef50_B2A8K6 Two component transcriptional regulator, LuxR family n=9 Tax=Clostridia RepID=B2A8K6_NATTJ Length = 228 Score = 273 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 66/218 (30%), Positives = 120/218 (55%), Gaps = 8/218 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +LL DDH L R G+++IL+ + + V GEA GE+ V + +++LMD++MP + Sbjct: 10 IRILLADDHALFRQGLKKILDMEEDLAVCGEAQNGEEVVDKVKLLKPNIILMDINMPLLN 69 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EAT+ + + + K+I LT+H + ++++ GAAG+L K +V AI+ V G Sbjct: 70 GVEATKYVKEVSPETKVIALTIHEDEEYLFEIVKEGAAGFLLKDVETPTLVQAIQEVNKG 129 Query: 122 QRYIASDIAQQMA-----LSQIEPEKTESPFA---SLSERELQIMLMITKGQKVNEISEQ 173 +I I ++ L+Q P +S A L+ RE +I+ ++ +G EIS++ Sbjct: 130 NSFIHPTITHKLLGEFNRLAQNSPRNIKSDEAVQSELTGREKEILELMAQGYTNKEISKE 189 Query: 174 LNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 L +S KTV ++ + K+++ + A++ G+ Sbjct: 190 LYISEKTVKNHVSNILRKMDVTDRTQAVITALKCGVVQ 227 >UniRef50_C1A9U5 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9U5_GEMAT Length = 223 Score = 273 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 67/211 (31%), Positives = 121/211 (57%), Gaps = 1/211 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+ DDH LVR G+R +L+ GI+VVGEAS G AV + DVV++D++MP Sbjct: 11 IRVLIADDHALVREGLRYVLDADPGIEVVGEASNGRTAVDLALQHVPDVVVLDITMPEES 70 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GL+A ++ + D ++++L++H + + M+ G GYL K +A +E+ +AIR+V++G Sbjct: 71 GLKAAARLREALPDTRVLLLSMHDQGEYVREGMRIGTHGYLLKDSAGEELRAAIRAVHAG 130 Query: 122 QRYIASDIAQQMALSQIEPEKTESP-FASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 + + + +++ +++ E + L+ RE ++ + +G I+ +L +S +T Sbjct: 131 GTFFSPAVVRRLTSTEVVSEGAPAAQLDLLTPRERDVLAGVARGLTNKAIAAELGISRRT 190 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V ++R + KL IH LT A+ G+ Sbjct: 191 VEAHRESLMRKLQIHSVAGLTRFALETGIIT 221 >UniRef50_B4CWX5 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B4CWX5_9BACT Length = 210 Score = 273 bits (700), Expect = 3e-72, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 119/212 (56%), Gaps = 8/212 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +L+VDDH +VR+G+ L + VVGEA +AV R + DVVLMD+ +PG Sbjct: 7 IRILVVDDHHVVRSGLAASLGLEDDLNVVGEAGNAGEAVTQFRKHHPDVVLMDLRLPGAN 66 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G AT + R D +++M T + MQAGA GYL K AA +E++SAIR+V +G Sbjct: 67 GTAATADLRREWPDARVLMFTTFDGEEDIYRAMQAGARGYLLKSAAREELLSAIRAVAAG 126 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 +R++++ +AQ++A P+ S+RE +++ +I +G+ EI+ L +S +TV Sbjct: 127 ERHLSAALAQRLAGRVAAPDV--------SDREREVLQLIARGKANKEIAAALGISEETV 178 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 + +F K+ + + T IR GL E Sbjct: 179 KRHASNLFVKMGVADRAQATSEGIRRGLIQLE 210 >UniRef50_B0C955 Two-component transcriptional regulator, LuxR family n=4 Tax=Cyanobacteria RepID=B0C955_ACAM1 Length = 215 Score = 273 bits (699), Expect = 3e-72, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 113/209 (54%), Gaps = 2/209 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +LL DD L R G+ +LE + + VVG+A G DA+ +T DV+LMD+ MP Sbjct: 1 MIRLLLADDQALFRQGLASLLELEEDLSVVGQAQDGRDAILLTQTLQPDVILMDVRMPIC 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EATR+I + ++I++LT E+ +QAGA GYL K ++ +AIR ++ Sbjct: 61 DGVEATREIHQRFPWIRILVLTTFDEDEYIWTSLQAGALGYLLKSTPASQLAAAIRMLHD 120 Query: 121 GQRYIASDIAQQMALSQIEPE--KTESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 G + IA ++ P ++ LS+REL ++ +I +G+ EIS+ L+L+ Sbjct: 121 GHFQLGPTIAPKVIAQLRPPPLKNEQNHLERLSDRELDVLNLIGQGKSNREISQILHLTE 180 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRH 207 TV +Y ++ L + + A ++ Sbjct: 181 GTVKNYVSQLLGSLGVRDRTQAALWAQQY 209 >UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteria RepID=Q8YV43_ANASP Length = 209 Score = 272 bits (698), Expect = 4e-72, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 114/210 (54%), Gaps = 8/210 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+ DDH + R G+ I+ ++VV +A GE + + DV LMD+ MP + Sbjct: 7 IRVLIADDHAIFRQGLATIINRDPEMQVVAQAENGEQVIALFEEHQPDVTLMDLRMPEVE 66 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ A I + +II+LT + + + +QAGA GYL K P E+++AIR+V+ G Sbjct: 67 GVAAISAICATAKSARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVHRG 126 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 +YI D+ ++ PE LSEREL+++ + +G +I++ L++ TV Sbjct: 127 HKYIPPDVGAKLVQRLSNPE--------LSERELEVLRSLAQGMSNADIADALSIGEGTV 178 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 S+ R+ +KL++ + +A++ G+ N Sbjct: 179 KSHVNRILNKLDVSDRTQAVIVAVKRGIVN 208 >UniRef50_D1VBH1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=D1VBH1_9ACTO Length = 248 Score = 272 bits (698), Expect = 5e-72, Method: Composition-based stats. Identities = 71/223 (31%), Positives = 119/223 (53%), Gaps = 7/223 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+ DD LVRAG R ++E + VV EA+ G AV+ R DVVLMD+ MP + Sbjct: 26 IRVLIADDEGLVRAGFRALVEATPDLTVVAEAADGVAAVRESRRLRPDVVLMDIRMPVMN 85 Query: 62 GLEATRKIARS--TADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVY 119 GLEATR IA I+++T ++ + ++AGAAG++ K P+ +++AIR+V Sbjct: 86 GLEATRLIAADAVRPGPGILVVTTFDDDEYVFEALRAGAAGFILKDTQPENLLAAIRTVA 145 Query: 120 SGQRYIASDIAQQMALSQIE-PEKTESPF----ASLSERELQIMLMITKGQKVNEISEQL 174 +G +A + +++ + + P SP ++L++RE ++ I G EI++ L Sbjct: 146 AGDALLAPGVTRRLIAAFVRVPAPPASPLTGLASTLTDRERAVLTQIANGYSNAEIAQAL 205 Query: 175 NLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLSS 217 +S TV ++ + +KL +L A GL + ++ Sbjct: 206 YVSVSTVKTHVGHLLAKLAARDRAQLVIAAYESGLVAPGSATA 248 >UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR family n=30 Tax=root RepID=A1WBJ7_ACISJ Length = 239 Score = 272 bits (698), Expect = 5e-72, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 135/211 (63%), Gaps = 1/211 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI + +VDDH +VRAG+R+ L + ++VVGEAS G +A+ R + +DV++MD+SMPG Sbjct: 30 MIKIGIVDDHAIVRAGLRQFLSEHVDLRVVGEASNGREAIDLVRVHEIDVLVMDLSMPGQ 89 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GL+A + D+ I++L+ + E +++ GA+GYL+K P+E+V AIR++ Sbjct: 90 SGLDALAMLRAKAPDMGILILSGYPEEHYAINLIRQGASGYLNKECEPKEIVEAIRTIAL 149 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+RY+ +A +A Q+ + P LSERE Q+ L + KG+ +I++ L+LS KT Sbjct: 150 GRRYLTPSVADLLA-QQLNRKDDAPPHEQLSEREFQVFLKLAKGETAGDIAKSLSLSVKT 208 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V++YR R+ K+ + + +LT+ A+++ L + Sbjct: 209 VSTYRTRLMEKMGLSSNSDLTYYALKNKLID 239 >UniRef50_D1XHI5 Two component transcriptional regulator, LuxR family n=4 Tax=Streptomyces RepID=D1XHI5_9ACTO Length = 222 Score = 272 bits (697), Expect = 6e-72, Method: Composition-based stats. Identities = 67/215 (31%), Positives = 113/215 (52%), Gaps = 7/215 (3%) Query: 5 LLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGLE 64 ++ DD +VR GI +L + GI+VVG A G++AV A DVVLMD+ MP G+E Sbjct: 2 VVADDQAIVREGIVMLLGLLPGIEVVGAAKDGDEAVALVAEKAPDVVLMDLRMPRCDGVE 61 Query: 65 ATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQRY 124 ATR+I + ++++LT ++ +QAGA GYL+K A +E+V AI +V SG+ Sbjct: 62 ATRRIRKEHPRTQVVVLTTFADDDSLFTALQAGARGYLTKDARGEEIVQAIDAVMSGEAG 121 Query: 125 IASDIAQQMALSQIEPEKTESP-------FASLSERELQIMLMITKGQKVNEISEQLNLS 177 ++ + +++ E +P L+ RE +++++I +G EI+ L++S Sbjct: 122 LSPKVQRRLLERVTGSETVPAPCALPSELPDGLTPREAEVLVLIAEGLSNREIARALHVS 181 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 TV ++ +F+K + A GL Sbjct: 182 AATVKTHINNLFAKTGARDRTQAVRYAYGRGLARP 216 >UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTE0_9BACI Length = 219 Score = 272 bits (697), Expect = 7e-72, Method: Composition-based stats. Identities = 70/213 (32%), Positives = 121/213 (56%), Gaps = 4/213 (1%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 ++LVDDH + R+G++ IL V+ EA GE A++ D+++MD+SMPG+ G Sbjct: 4 RIMLVDDHPVFRSGLKHILCTEADYHVIAEADDGESAIEMAAEANPDIIIMDISMPGLDG 63 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 +E TR+I R D++I+MLT++ + + + AGA+GY+ K A E+V A++ V +G+ Sbjct: 64 IEVTREIKRKIPDIRILMLTMYADEAFLKESLDAGASGYVLKRAVDTELVHAVKLVMNGE 123 Query: 123 RYIASDIAQQMALSQIEPEKTESPFA----SLSERELQIMLMITKGQKVNEISEQLNLSP 178 YI + ++ + + SP + LS+RE +++ I G EIS +L +S Sbjct: 124 HYIYPTLIPKLYHANQPQQDAVSPDSNQAVELSQREQEVLKYIALGYTQKEISTELFISI 183 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 KTV++Y+ R+ K+ L A++H + N Sbjct: 184 KTVDTYKKRVMEKIGSKKKSALVRYALKHNIIN 216 >UniRef50_B1M5J4 Two component transcriptional regulator, LuxR family n=7 Tax=Bacteria RepID=B1M5J4_METRJ Length = 222 Score = 272 bits (697), Expect = 7e-72, Method: Composition-based stats. Identities = 74/217 (34%), Positives = 121/217 (55%), Gaps = 3/217 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V L DDH +V AGIR +L I++VGEA+ G +A+ DV ++D+SMPG+ Sbjct: 5 IRVALADDHPIVLAGIRTLLNADPEIELVGEATSGSEALPMIHAADPDVAVVDVSMPGLN 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLE T ++A S ++++LTVH + +++AGA GYL K +A ++++ A+R+V +G Sbjct: 65 GLELTERVAGSCPRTRVLVLTVHEDAAYVQPLLKAGARGYLLKRSAAEDLLRAVRAVAAG 124 Query: 122 QRYIASDIAQQMALSQIEPEK---TESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 Y+ +A P + TE +LS RE ++ +I +G EI+ + +LS Sbjct: 125 GIYLDPSVASHAMAHPATPTQGGDTEPSAEALSPRETDVLRLIAQGFSNKEIARRFDLSV 184 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETL 215 K++ +Y+ R KL + E+ A HG +A L Sbjct: 185 KSIETYKARAAEKLGLRTRAEIIRYAAAHGWLDALAL 221 >UniRef50_O07528 Uncharacterized transcriptional regulatory protein yhcZ n=3 Tax=Bacillus RepID=YHCZ_BACSU Length = 214 Score = 272 bits (696), Expect = 7e-72, Method: Composition-based stats. Identities = 61/209 (29%), Positives = 108/209 (51%), Gaps = 2/209 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +++ DDH +VR G+R I+VVGEA+ G +A++ D+VLMD+SMP + Sbjct: 1 MKIVIADDHHVVRKGLRFFFATQDDIEVVGEAATGLEALRVIEETKPDLVLMDLSMPEMD 60 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++A +K + D II+LT +++ +QAGA Y K P+E+V R V+ G Sbjct: 61 GIQAIKKAIQQFPDTNIIVLTSYSDQEHVIPALQAGAKAYQLKDTEPEELVKT-RQVHGG 119 Query: 122 QRYIASDIAQQMALSQIEPEKTE-SPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 + +++ I + E + L+ RE ++ I G+ EI+ L +S KT Sbjct: 120 EYKLSTAIMPHVLTHMKNQHDPEKEKYYQLTRREKDVLTEIANGKSNKEIAAALFISEKT 179 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 V ++ + +KL + + A+++ L Sbjct: 180 VKTHVSNLLAKLEVADRTQAALFAVKYNL 208 >UniRef50_Q47FR0 Two component transcriptional regulator, LuxR family n=9 Tax=Betaproteobacteria RepID=Q47FR0_DECAR Length = 218 Score = 272 bits (696), Expect = 8e-72, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 126/211 (59%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI L+ DDH+++R G++ IL D I V EAS G +A+ R D +++D++MPG Sbjct: 1 MIRTLIADDHDILRIGLKHILSDTGDIVVTAEASNGIEALVELRKGTFDALVLDLTMPGR 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+E ++I + I++L++H E+ + ++AGA+GYL K +A + AIR V Sbjct: 61 NGIELIKQIKGEFPKLPILILSMHKEDIYAVRSLKAGASGYLCKDSAETLLADAIRKVAD 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G +I +A+++ L + T++P L++RE QI LMI +G V EI QLNLS KT Sbjct: 121 GGLFINQAVAEKLTLQILHGRDTDAPHTGLTDREHQIFLMILQGLGVTEIGRQLNLSVKT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V++++ + +K+N+ EL AI+H L + Sbjct: 181 VSTHKASILAKMNLRNSAELVRYAIQHRLID 211 >UniRef50_C6XAP6 Two component transcriptional regulator, LuxR family n=3 Tax=cellular organisms RepID=C6XAP6_METSD Length = 214 Score = 272 bits (696), Expect = 9e-72, Method: Composition-based stats. Identities = 80/212 (37%), Positives = 127/212 (59%), Gaps = 2/212 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 +I VLLVDDH +VR+G+ R+LE GIKVV EA GE A + DV +MD+SMPG+ Sbjct: 5 IIRVLLVDDHTVVRSGLCRLLEQHSGIKVVAEAESGEQAYQVFGEYLPDVTVMDLSMPGM 64 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GGLEA R+I ++++ ++H + +++GA GY++K + E+V A+ V Sbjct: 65 GGLEAMRRILARYRTARVLIFSMHENAAFAMQTLKSGARGYVAKTGSFDELVKAVVEVAR 124 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+ YI++ IAQ++AL + + + LS RE ++ + +G+ EI+E L +S KT Sbjct: 125 GKSYISTSIAQKIALQTVIGDG--DLISQLSPREFEVFRLFAEGKNAEEIAEVLKISQKT 182 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 V +Y + KL + VE+ AI+HGL ++ Sbjct: 183 VANYHTLVKQKLGLSNPVEMVRFAIKHGLIDS 214 >UniRef50_A9AX03 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AX03_HERA2 Length = 218 Score = 271 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 77/213 (36%), Positives = 127/213 (59%), Gaps = 5/213 (2%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +L+ DD +VR G+ +L ++V+ AS G +AV+ T D++LMD+ MP + Sbjct: 1 MIKLLICDDQAVVRDGLSIMLNLAPDLEVIAVASNGREAVQLSATWQPDLILMDLKMPIM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EATR+I+ + VKI++LT + ++ + ++AGAAGYL K A ++VSAIR S Sbjct: 61 NGIEATRQISAAQPLVKILVLTTYDDDEWLFEAIRAGAAGYLLKDMAHSDLVSAIRGTVS 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFA----SLSERELQIMLMITKGQKVNEISEQLNL 176 G+ Y+ ++ ++ LSQ+ + + P + L+EREL ++ +I G I+EQL L Sbjct: 121 GKAYVDPNVTARL-LSQVATSRNQPPASQLTGRLTERELAVLNLIATGHTNASIAEQLRL 179 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 S TV ++ + SKL++ + LA+ HGL Sbjct: 180 SEGTVRNHVSTILSKLDVADRTQAALLAVEHGL 212 >UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR family n=29 Tax=Alphaproteobacteria RepID=Q1GIA7_SILST Length = 233 Score = 271 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 68/211 (32%), Positives = 118/211 (55%), Gaps = 6/211 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+VDDH +V GI+ ILE I+VVG S G +A+ DV+LMD++MP +G Sbjct: 24 IRVLIVDDHPMVAEGIQSILESYGDIEVVGAVSSGREAIARAEALVPDVILMDLNMPDVG 83 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GL AT I ++++++L++H + GA GY+ K P+E+ +AI +V G Sbjct: 84 GLSATEIIQERCPEIRVLILSMHDSPEYITTALSHGAVGYVLKDVQPEEIKTAIDAVMRG 143 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 ++Y+ + A + ++++ +L+ RE I+L + +G+ E+++ L++S +TV Sbjct: 144 EQYLCTGAAGSL------SPQSQTSREALTGREQTILLELAQGKSNKEVAQALDISVRTV 197 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 ++R + KL I LT A+ HG+ Sbjct: 198 ETHRKNIKRKLGISSTAGLTRYALEHGVLQG 228 >UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=Q1AVR6_RUBXD Length = 220 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 57/215 (26%), Positives = 111/215 (51%), Gaps = 4/215 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + V++V+D L+R G+R +L+ +G++VVGEA+ G +A++ +VVL+D+ MP + Sbjct: 5 VRVMIVEDQALMREGLRTLLDLEEGVEVVGEAADGVEALERLPGARPEVVLVDVRMPRMD 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++ ++ R +V I+LT ++ + ++AGA GY+ K +E+ +AI V+ G Sbjct: 65 GIQLIERLGREHPEVAAIILTTFDDDEYVFRGLRAGARGYILKDTPSEELAAAIEKVHRG 124 Query: 122 QRYIASDIAQQMALSQIE----PEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 + + I ++ P + LSERE++++ ++ G EI+ L ++ Sbjct: 125 EAVLDGPITLKVISELGRLSKGPAGPQPGSGGLSEREMEVLRLVASGASNREIARALYIT 184 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 TV ++ + KL + A+ G A Sbjct: 185 EGTVKNHISSILRKLGFRDRTQAALYALERGWIEA 219 >UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VH7_CYTH3 Length = 220 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 75/217 (34%), Positives = 121/217 (55%), Gaps = 8/217 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 IN+LLVDDH +VR GI+ L+D K +VGEA+ G D ++ + DVV+MD++MP + Sbjct: 4 INILLVDDHTIVRDGIKATLKDQKNFHIVGEAANGLDGIEAVKQLKPDVVIMDITMPEMS 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA I++ D K+++L++H K ++AGA GYL K E + AI +VY+G Sbjct: 64 GIEAADVISKKYPDSKVLILSMHDNETYILKSVEAGAYGYLLKDVDKDEFIKAITAVYNG 123 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFAS--------LSERELQIMLMITKGQKVNEISEQ 173 +Y + I+ + + K S L++RE I+ MIT G+ EI++ Sbjct: 124 DKYFNTAISSVLVSGYLSKVKQTDSIQSGYSNDEYELTKREKGILKMITDGKNNREIADG 183 Query: 174 LNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 L +S +T+ ++R + KL + VEL +AI + Sbjct: 184 LGISIRTIETHRANIMKKLKVKNAVELVRIAIDEKIV 220 >UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3 Tax=Proteobacteria RepID=Q313W8_DESDG Length = 223 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 71/210 (33%), Positives = 122/210 (58%), Gaps = 3/210 (1%) Query: 4 VLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGL 63 +++ +DH L+R G++ +L+ + + V GEAS G+ AV C N ++VLMD+SMP + G+ Sbjct: 7 LIIAEDHTLLREGLKSLLQSVPHLIVTGEASDGQMAVDLCDRNQPELVLMDISMPRMDGV 66 Query: 64 EATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQR 123 +ATR I + +V++++LTVH + AGA GY+ K A+ E + A+ SV G+ Sbjct: 67 QATRLIKKRHPEVRVLVLTVHGAGEYVYAALAAGADGYVLKDASNDEFILAVESVLGGKI 126 Query: 124 YIASDIAQQMA---LSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 Y++ ++ + L+ + S + +L+ RE +I ++ +G K EI+E L +S KT Sbjct: 127 YLSPGVSDAVVKGYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREIAEMLVVSVKT 186 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 V +R + KL +H EL LA+ G+ Sbjct: 187 VEKHRSNLMQKLGVHSAAELRALALERGII 216 >UniRef50_A0K2I9 Two component transcriptional regulator, LuxR family n=5 Tax=Actinomycetales RepID=A0K2I9_ARTS2 Length = 250 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 75/237 (31%), Positives = 122/237 (51%), Gaps = 28/237 (11%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLLVDD L+R G R ILE +++VGEAS G +A++ R DVVLMD+ MP + Sbjct: 7 IKVLLVDDQPLLRMGFRLILEGEDDLRIVGEASDGAEAIRQVREVDPDVVLMDVRMPVLD 66 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR + S + K+I+LT + +QAGA+ +L K AP E+VSA+R V SG Sbjct: 67 GIEATRAVTSSGSHAKVIILTTFDLDEYAFAGLQAGASAFLLKDVAPSELVSAVRVVASG 126 Query: 122 QRYIASDIAQQMALSQI----------------------------EPEKTESPFASLSER 153 +A + +++ + + E ++ + +L+ R Sbjct: 127 DAVVAPRVTRRLLEAYVREGNPPAVNGQRAGTSAPAAGRGRHSLGEEQQRDPLLEALTPR 186 Query: 154 ELQIMLMITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 E++++ + +G EI+ + LS TV ++ R+ +KL++ V+ A GL Sbjct: 187 EMEMLEAMAEGLSNAEIAHRFFLSEATVKTHVRRILAKLHLRDRVQAVVYAYETGLV 243 >UniRef50_A5V148 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=A5V148_ROSS1 Length = 216 Score = 270 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 65/211 (30%), Positives = 122/211 (57%), Gaps = 1/211 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I++L+V+D L+R G+R IL+ + I+VVGEA G + V+ D++LMD+ MP + Sbjct: 6 ISILIVEDQTLMRQGLRTILDLEESIRVVGEARDGAEGVREALRLRPDIILMDVQMPVMN 65 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA R I + + +II+LT + + ++AGA GYL K A + ++ IR V++G Sbjct: 66 GVEAIRAIIAAWSQARIIVLTTFDRDDYVFQSVRAGAMGYLLKDAPAEALLQTIRRVHAG 125 Query: 122 QRYIASDIAQQ-MALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 + +I +IA + + + + + LSERE ++++++ +G EI+ +L+++ T Sbjct: 126 EVFIQPEIASRTLREAATGRRRAGTIPFDLSEREREVLVLLAQGLSNREIAGRLSITEGT 185 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V ++ + +KL + ++A R GL + Sbjct: 186 VKNHVSNILAKLQAENRTQAANIARREGLTD 216 >UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92 Tax=Burkholderiales RepID=Q3JFS6_BURP1 Length = 282 Score = 270 bits (692), Expect = 2e-71, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 126/211 (59%), Gaps = 1/211 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VL+ DDH LVR G+R IL++ G +V GEA + R+ V+++D+SMPG Sbjct: 68 MIKVLIADDHALVRDGLRHILQNASGYEVAGEAFDSATTIALVRSTPAQVLVLDLSMPGR 127 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+E ++I ++I++LT+H E + +AGA+GYL+K +A E+V A+ V S Sbjct: 128 NGVELIKQIKEEKPALRILVLTMHAEQQYAVRAFRAGASGYLTKESASSELVGAVTKVAS 187 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G Y++ +A++ A S EP +T P LS+RE + I GQ + +I+++L +S KT Sbjct: 188 GGVYVSLAMAERFAQSLNEPAET-LPHHRLSDREFDVFRRIASGQTLTQIADELCVSAKT 246 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V++Y+ R+ K+ + + L A+RH L + Sbjct: 247 VSTYKTRILEKMQMPHEAALVRYALRHKLID 277 >UniRef50_D1C6S1 Two component transcriptional regulator, LuxR family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6S1_SPHTD Length = 223 Score = 270 bits (692), Expect = 2e-71, Method: Composition-based stats. Identities = 71/212 (33%), Positives = 119/212 (56%), Gaps = 3/212 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I++LLVDDH L R G+ +L VVGEA+ GE+AV+ R DVVLMD+ +PGI Sbjct: 4 ISLLLVDDHALFREGLASLLSYQPDFTVVGEAASGEEAVERARELVPDVVLMDIDLPGID 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR+I R +V+++MLTV+ ++ + ++AGA GYL K E++ +R + G Sbjct: 64 GIEATRRIKRQLPEVRVVMLTVYDDHERLFQSIKAGAQGYLIKNIRSAELLDQLRGLARG 123 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFAS---LSERELQIMLMITKGQKVNEISEQLNLSP 178 + I+ +A ++ E+ LS RE++++ ++ EI+ +L++S Sbjct: 124 EAAISRRMAARILEEFARLERQAEILEPDGGLSPREVEVLELVALRLSNKEIAARLSISE 183 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 TV ++ + +KL + + A+ HGL Sbjct: 184 HTVKNHLKNILAKLQLSSRRQAAAYAVAHGLI 215 >UniRef50_B2J2N1 Two component transcriptional regulator, LuxR family n=12 Tax=Cyanobacteria RepID=B2J2N1_NOSP7 Length = 232 Score = 270 bits (691), Expect = 3e-71, Method: Composition-based stats. Identities = 62/208 (29%), Positives = 110/208 (52%), Gaps = 5/208 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +L+VDD L+R G++ +LE ++VVG+A G+ A++ DVVLMD+ MP + Sbjct: 9 IRLLIVDDQSLIRQGLKAMLEQEPDLEVVGDAENGKVALELVAELQPDVVLMDIRMPEMD 68 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G AT+ I +S ++K+++L+ ++ M+AGA GYL K E+ AIR +SG Sbjct: 69 GRTATKLIMQSFPNIKVLVLSTFDDDSYLTGAMRAGAKGYLLKDMPSSELADAIRFGHSG 128 Query: 122 QRYIASDIAQQM-----ALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNL 176 + ++ A + S + ++ RE +++ +I G EI++QL + Sbjct: 129 YTQFGPGLFDKLLVTEAASASANQNSASSKPSEITAREQEVLCLIGVGATNREIAQQLYI 188 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLA 204 + TV ++ + S+LN+ +L A Sbjct: 189 TEGTVKTHVTSILSRLNLKNRSQLAIYA 216 >UniRef50_P55184 Uncharacterized transcriptional regulatory protein yxjL n=1 Tax=Bacillus subtilis RepID=YXJL_BACSU Length = 218 Score = 269 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 63/213 (29%), Positives = 107/213 (50%), Gaps = 3/213 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V L DD LVR G R ++ + V GEA G D + + DV+LMD+ MP Sbjct: 6 IRVALADDQPLVREGFRYVINAQTDMTVSGEAGDGHDIIALAKQTKPDVILMDVQMPRCS 65 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA + I + + KI++LT + ++AGA GYL K P+E++ AIR+ G Sbjct: 66 GIEAAKDIMSALPNTKIVILTTFDTEEYVFEGIRAGAVGYLLKDTLPEELIDAIRAAARG 125 Query: 122 QRYIASDIAQQMALSQIEPEK---TESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 + + A ++ ++ E ++REL+++ + G + +I+E+L +S Sbjct: 126 EAIFRTVTAAKIISETFRAKQQTHAEELAEPFTKRELEVLQQMAYGLRNEDIAEKLFVSE 185 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 TV ++ +R+ K N + AIR+G+ Sbjct: 186 STVKTHVHRILQKCNAQDRTQAVVFAIRNGIVQ 218 >UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ectothiorhodospiraceae RepID=B8GSX5_THISH Length = 220 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 103/218 (47%), Positives = 150/218 (68%), Gaps = 4/218 (1%) Query: 1 MINVLLVDDHELVRAGIRRILE---DIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSM 57 MI+VLLVDDHELVR GIR +L+ + GI+VVGEA GE+A+ + DVVLMD++M Sbjct: 1 MIDVLLVDDHELVRMGIRGLLDERAAVTGIQVVGEAHSGEEALVEAKRLKPDVVLMDINM 60 Query: 58 PGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRS 117 PGIGGL ATR+I + VK+++LT E P+P V++AGA+GYL+KG +E+++AI+ Sbjct: 61 PGIGGLVATRRIVEAQPSVKVLVLTAMDEGPVPRWVLEAGASGYLTKGCRIEEMIAAIQG 120 Query: 118 VYSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 G+R+I+ +AQ++AL + + +PF LS RE QI+LMI +GQ I+ LN+S Sbjct: 121 AMQGERHISPAVAQRLALGGL-AKGQANPFDELSGRERQILLMILQGQTPQAIATALNIS 179 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETL 215 PKTV++Y+ R+ KL I D++L LA +HGL + + Sbjct: 180 PKTVSTYKCRVMGKLGISNDMQLVTLAAQHGLIASREV 217 >UniRef50_A9B5L0 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5L0_HERA2 Length = 207 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 117/211 (55%), Gaps = 4/211 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VL+VDDH +VR G+ +L + + VG+A+ G+ AV DVVL+D+ +P + Sbjct: 1 MIRVLVVDDHPVVRHGLMAMLGWEQDFEPVGDAADGQQAVNLIEQQQPDVVLLDLRLPQL 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+E R S + + ++LT + + + AGAAGYL K A+P+EV AIRS+Y Sbjct: 61 SGIEVMRHTRASAPNTRFLVLTTYDTDEYIGPALNAGAAGYLLKDASPEEVFRAIRSIYE 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G + S IA ++ TE LS+REL ++ ++ +G+ I+ LN+S T Sbjct: 121 GGAALQSGIAARVLKRLA----TEPAEDELSQRELDVLQLLVRGESNKAIALSLNISENT 176 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 + S+ +FSKL++ E +A++ GL Sbjct: 177 IKSHVSHIFSKLDVRSRAEAVAVALQRGLVK 207 >UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y661_9BACT Length = 216 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 77/212 (36%), Positives = 123/212 (58%), Gaps = 2/212 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLL DDHE+ G+R +L GI++ G A G +AV DV LMDM+MP + Sbjct: 3 IRVLLADDHEMFLEGLRELLGKADGIELAGLARDGAEAVAAAERLQPDVALMDMTMPRLN 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++AT+KIA + K+++L++H + L + ++AGA GY+ K + QE+ AI++V +G Sbjct: 63 GIQATQKIAAGSPGTKVLVLSMHGDKNLIVESLKAGARGYVLKECSSQELCLAIQTVANG 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFA--SLSERELQIMLMITKGQKVNEISEQLNLSPK 179 Q Y+ I + + + E + LSEREL ++ ++ KG +I+EQL++S Sbjct: 123 QYYLTPAILSTLIGDYLRLTENEEQGSDCPLSERELDVLKLLVKGCNAKQIAEQLSISKN 182 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 TV+++R + KL + ELT AIR G + Sbjct: 183 TVDTHRRHILDKLGCNSMAELTRYAIREGYLD 214 >UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR family n=2 Tax=Frankia sp. EAN1pec RepID=A8L9Z7_FRASN Length = 218 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 79/208 (37%), Positives = 119/208 (57%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLL DDH LV G+ +++ + G+ VVGEA+ GE AV T DVVLMD+ MPGIG Sbjct: 8 IRVLLADDHRLVLDGLSALIDSVDGLTVVGEATSGEQAVDLAGTEHPDVVLMDIEMPGIG 67 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR+I + + ++MLT++ E+ ++AGA GYL KGA ++VV I +V G Sbjct: 68 GVEATRRITTAQPTIAVVMLTMYGEDEFVFAALRAGARGYLLKGAQQKDVVRTIGAVARG 127 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 D+A ++ + P +PF L+ERE +++ ++ G + I+ L L+PKTV Sbjct: 128 DAVFGPDVAHRVLRTFTSPPAENAPFPELTEREREVLSLLANGWPNSRIARHLQLTPKTV 187 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 + + +KL+ A R GL Sbjct: 188 ANNVSNILAKLHAPDRTAAILRARRAGL 215 >UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUT0_9FIRM Length = 216 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 124/210 (59%), Gaps = 3/210 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +LL DDH ++R G+ +L + VV EAS GE+A++ VD+ L+D+SMP +G Sbjct: 8 LRILLADDHRVLRKGLSLLLSSEEDFSVVAEASDGEEALEKAAKTPVDIALLDLSMPHMG 67 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLE R++ V++++LT+H+E + ++AGA GYL K E+ A+R+V +G Sbjct: 68 GLECLRRLKAMQPAVRVLILTMHSERQYVCECLRAGANGYLCKDTLDAELFRALRTVAAG 127 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 RY+ A+ + +E + A+LS RE +++ +I G ++ I+++L LS KTV Sbjct: 128 GRYLGEREAELLIDGALEEPEEP---AALSTREREVLELIVHGYSLSTIADKLYLSIKTV 184 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++Y+ R+ KL+ + EL A+RH + Sbjct: 185 STYKTRLLQKLDCTQNSELVDYALRHNILG 214 >UniRef50_C0N6H7 Response regulator receiver domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6H7_9GAMM Length = 214 Score = 269 bits (689), Expect = 6e-71, Method: Composition-based stats. Identities = 81/209 (38%), Positives = 135/209 (64%), Gaps = 2/209 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V+LVDDH +VR+G+ R+LE I VVGEA GE A + + DV++MDMSMPG+G Sbjct: 5 IRVMLVDDHAVVRSGLCRLLEQNTDISVVGEAESGEQAYQTYPEISPDVLVMDMSMPGMG 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLEA R+I + K+IM ++H + + AGA GY++K +++V A+R V SG Sbjct: 65 GLEAVRRILNRWSGAKVIMFSMHENATYAIQSLTAGAMGYVAKSGHAEDLVKAVREVKSG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + +++SD+A ++AL + + ++P L+ RE ++ ++ +G+ V++I+ +LN+ KTV Sbjct: 125 KSFLSSDMAHKVALQSLAGD--DNPTQRLTSREFEVFRLLAEGKLVDDIASRLNIGQKTV 182 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 +Y+ + KL IH V+L LA+++G+ Sbjct: 183 ANYQTSLKQKLGIHSPVDLVRLAMKYGVI 211 >UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR family n=10 Tax=Proteobacteria RepID=Q1GZT3_METFK Length = 215 Score = 268 bits (688), Expect = 6e-71, Method: Composition-based stats. Identities = 82/210 (39%), Positives = 136/210 (64%), Gaps = 1/210 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V++ DDH ++R G+++IL + + I+VV +A +A+K T +DVV++D+S+P Sbjct: 7 IKVVIADDHAILREGLKQILAETEDIEVVADAKNAAEAIKLAGTKGLDVVVLDISLPDRS 66 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA I + V ++ML++H E+ + ++AGA GYLSK +A ++V+AIR+V G Sbjct: 67 GIEACNIIKKEHPGVAVLMLSMHREDAYAIRALRAGAVGYLSKQSASDQLVTAIRTVAKG 126 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 ++YI++++A +A Q+ + +LS RE Q + MI G V+EI+E L+LS KTV Sbjct: 127 KKYISAEVALALA-DQVSGGLEKPIHDTLSNREFQTLTMIASGLSVSEIAENLSLSVKTV 185 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 + YR R+ KLN+ + ELTH AI++ L + Sbjct: 186 SMYRARLLEKLNLRHNAELTHYAIKNNLID 215 >UniRef50_Q024Y7 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q024Y7_SOLUE Length = 225 Score = 268 bits (688), Expect = 7e-71, Method: Composition-based stats. Identities = 76/211 (36%), Positives = 129/211 (61%), Gaps = 3/211 (1%) Query: 4 VLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGL 63 ++LVDDH+LVR G+R ILE VVGEA G DAV+ C+ ++ D+VLMD+ +PG+ G+ Sbjct: 5 IVLVDDHKLVRDGVRMILERGSEFLVVGEAENGADAVQLCKKSSPDIVLMDIGLPGMNGI 64 Query: 64 EATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQR 123 EAT ++ R VK+I+L+++ + +++GA ++ K A+ E++ A+R+V G Sbjct: 65 EATTELLRHCPSVKVIILSMYDDENSVVSAIRSGARAFVLKKASSNELLDALRTVARGGS 124 Query: 124 YIASDIAQQMALSQIEPE---KTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 Y++S ++ ++ + SP SLS RELQ++ ++ +G+ +I+ L+L +T Sbjct: 125 YLSSQVSDRLLQRIQRGDLETHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLLDLGLQT 184 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V SYR M KL ++ LT LA+ G+ + Sbjct: 185 VRSYRKTMMKKLGVNNVAGLTQLALAAGITH 215 >UniRef50_C0WKL5 Response regulator n=6 Tax=Corynebacterium RepID=C0WKL5_9CORY Length = 253 Score = 268 bits (687), Expect = 8e-71, Method: Composition-based stats. Identities = 71/240 (29%), Positives = 117/240 (48%), Gaps = 23/240 (9%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I + LVDD L+RAG ++ + + VV +AS G++ + R VD++LMD+ M + Sbjct: 11 IRIALVDDQPLLRAGFAMLIGSQEDMSVVWQASDGDEVLDLARQEPVDIILMDVQMARVN 70 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ AT ++ D K+IMLT ++ + AGA+G+L K P+E++SAIR+V+SG Sbjct: 71 GIAATEEVLPEFPDTKVIMLTTFDDHNFVHGAISAGASGFLLKDVEPEELLSAIRTVHSG 130 Query: 122 QRYIASDIAQQMALSQIEPEKTES-----------------------PFASLSERELQIM 158 + ++ I Q+ E +S P A L+ RE+ I+ Sbjct: 131 EAVLSPRITAQVLQQVRSEEGGDSRKAHSASHTAAAAQPGATTATAPPSAELTPREMDIL 190 Query: 159 LMITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLSSQ 218 ++ G EISE+ +S TV ++ + +K V+ A HG+ E L S Sbjct: 191 RLMALGYSNTEISEEEFVSMATVKTHVRHVLTKTGSRDRVQAVLYAYTHGVVTVEELLSH 250 >UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZNU7_THASP Length = 220 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 66/208 (31%), Positives = 120/208 (57%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +LL DDH++ R +R +L ++VV EA+ GE+ + VD+V MD++MPG+ Sbjct: 3 LRILLADDHQMFRHALRALLARDPELEVVAEAASGEEVLAIADAQPVDLVCMDIAMPGMD 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR++ +++I L+ + ++ AGA GY++KG A E++ AIR+V G Sbjct: 63 GIEATRRLLARHPALRVIGLSAFADRQFVTDLLAAGARGYITKGEAGDELLRAIRTVCEG 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + Y+ ++A +A + + + L+ RE Q++ +I +G +I ++L+++ TV Sbjct: 123 RSYLCPEVAATVADALRDSPGVYAAAPRLTARERQVLQLIAEGLTSVQIGDRLHIAASTV 182 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 +R + KL++H ELT AI G+ Sbjct: 183 EVHRRNLMRKLDLHNVAELTRYAIHSGI 210 >UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QY5_SYMTH Length = 218 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 72/213 (33%), Positives = 127/213 (59%), Gaps = 4/213 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + VL+VDDH ++R G+ +L + ++V+GEAS G++A++ D+VLMD++MP + Sbjct: 1 MKVLIVDDHLMLRKGVLSVLSNT-DLEVIGEASNGQEALELVPKLKPDLVLMDINMPVLD 59 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATRK+ + D+K+++LTV + + ++AGA GYL K P+E+VS++R+ SG Sbjct: 60 GVEATRKLKQMYPDLKVVILTVSEIDKDLFEAIKAGADGYLLKNLGPEELVSSLRAAISG 119 Query: 122 QRYIASDIAQQMALSQIEPEKT---ESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 + I+S +A +M +P + P LS RE++++ + + G EI+ +L ++ Sbjct: 120 EAPISSVMAAKMLKEFRQPRANTTGKQPGQQLSPREIEVLRLASTGLTYKEIAAKLYVAE 179 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 TV ++ + KL++ E AIR GL Sbjct: 180 STVKNHMRHILEKLHLRNRSEAVGYAIRTGLAG 212 >UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 Tax=Methylococcus capsulatus RepID=Q60AR8_METCA Length = 215 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 76/208 (36%), Positives = 127/208 (61%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V+LVDDH +VRAG R +L I+VVGEA GE+A + DV++MD+S+PGIG Sbjct: 5 ITVMLVDDHAVVRAGYRLLLSGTPNIEVVGEAERGEEACQLYADTRPDVIVMDLSLPGIG 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GL + R+I +I++ ++H E + ++AGA GY++K AP+ +V A+ + SG Sbjct: 65 GLASIRRIRSRDTSARILVFSIHDELIYVVRALEAGARGYITKSCAPEILVEAVARIASG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + ++ +IAQ++A+ + + + +LS RE + L++ KG E++E+L L KTV Sbjct: 125 ESFLEPEIAQRLAMQTLGGAEATTALNTLSAREFDVFLLLAKGYTTREVAEELRLGYKTV 184 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 +Y + SKL ++ E+ LA ++G+ Sbjct: 185 ANYSTLIKSKLGVNTTAEMARLAYQNGI 212 >UniRef50_A7NP18 Two component transcriptional regulator, LuxR family n=12 Tax=Bacteria RepID=A7NP18_ROSCS Length = 222 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 65/209 (31%), Positives = 113/209 (54%), Gaps = 1/209 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +LL DDH + R G+R +LE G +VGEAS G + + D+VL+D+ MP I Sbjct: 6 IRILLADDHRMFRQGLRELLERKGGFIIVGEASTGREVLAQAAALRPDIVLLDIQMPEID 65 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ R++A++ DVK+IMLT++ ++ + ++AGA YL K A E++ I V+ G Sbjct: 66 GVAVARQLAQTHPDVKVIMLTMYRQDQHLFEAIKAGARAYLLKDADADELIDVIERVHRG 125 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + + + ++ + + L+ERE I+ ++ +G I+++L LS KTV Sbjct: 126 EAALDPTVTLRV-FDEFRRLSIDQDAEQLTERERDILTLLAEGHDNRTIAQRLFLSEKTV 184 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 + +F KL + + +A++ GL Sbjct: 185 GNRLSEIFQKLGVSNRTQAALVAVQRGLI 213 >UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=Proteobacteria RepID=Q09C30_STIAU Length = 213 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 115/211 (54%), Gaps = 3/211 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MIN++LVDDH L+R GIR +LE + VVGEAS GE+AVK R + DVVLMD+ MP + Sbjct: 1 MINIVLVDDHALIREGIRSLLEFTPDLHVVGEASDGEEAVKRVRELSPDVVLMDVRMPRM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GLEA R + R + ++++LT E+ + + ++AG G+L K ++ AIR V + Sbjct: 61 TGLEALRAMRREAPERRVVLLTTFDEDSVVVEALRAGVKGFLLKDVTRDQLADAIRRVAN 120 Query: 121 GQRYIASDIAQQMALSQIEPEKT---ESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 G+ + +A+++ E + L+ REL++M +I +G EI+ L + Sbjct: 121 GETLLPPGVAERVQRGFTEVPQEFPHAELPEGLTRRELEVMRLIARGLSNREIATVLGTA 180 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHG 208 TV + + +KL + A+ G Sbjct: 181 EGTVKNQTSNILAKLGVRDRTRAVLRAMELG 211 >UniRef50_B8FX94 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FX94_DESHD Length = 212 Score = 267 bits (685), Expect = 1e-70, Method: Composition-based stats. Identities = 78/213 (36%), Positives = 122/213 (57%), Gaps = 1/213 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI V++ DDH L+R G+RRILE +GI+VV E G+ A+ RT D++LMD++MPG+ Sbjct: 1 MIRVVIADDHPLLREGLRRILEFEEGIQVVCEVGDGQGAINVSRTLDFDILLMDLNMPGV 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GLEA R I R + I++LTV + +V+Q G AGYL K P+ ++ +IR V+S Sbjct: 61 NGLEACRVIRRENETIGILVLTVDDSDEKVFQVLQLGVAGYLLKDVDPKTLIDSIRKVHS 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 GQ ++ + ++ + P + LS+RELQI+ + KG EI + L +S KT Sbjct: 121 GQPILSPAVTGKLLGQLVHPTQNRD-TCGLSDRELQILTYVVKGSSNREIGQALFISEKT 179 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 V ++ +F KL + + A++ L + Sbjct: 180 VKNHLSSIFRKLAVEDRTQAALKAVKLKLVQLD 212 >UniRef50_A1K960 Probable transcriptional regulator, LuxR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K960_AZOSB Length = 209 Score = 267 bits (685), Expect = 1e-70, Method: Composition-based stats. Identities = 72/209 (34%), Positives = 136/209 (65%), Gaps = 1/209 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 M+ VL+ DDH +VR G+R+ L + +V EA+ G+ A++ RT+ DVVL+D+++P + Sbjct: 1 MVKVLIADDHAVVRGGLRQFLSSTEEFDIVAEAANGQTALELVRTSGCDVVLLDITLPDL 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GLE ++I RS D+ +++ ++ +E+ + AGA+GYL+K + P ++++A+ +V + Sbjct: 61 NGLEVLKRIKRSKPDLPVLIFSMFSEDEFALPALNAGASGYLNKDSPPAQILAALHTVVA 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G RY++ +A+++ + P K P +LS RE+ ++L+++KG + I EQ +LS KT Sbjct: 121 GARYVSPSLAERLLAGTMSPGKR-LPHENLSPREMAVLLLLSKGVPLTRIGEQFHLSVKT 179 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 +++YR R+ KL++ + E+T ++H L Sbjct: 180 ISTYRARILEKLDLASNAEITRYVLQHKL 208 >UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVU6_9BACT Length = 216 Score = 267 bits (685), Expect = 1e-70, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 117/210 (55%), Gaps = 1/210 (0%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 ++LVDDH L R+G+R +L+ GI+VVGEAS GE+ + DVV MD +MPG+ G Sbjct: 5 RIILVDDHSLFRSGMRGLLDRYDGIRVVGEASTGEEFLAMLPATEADVVFMDFAMPGMNG 64 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 E T K +K+I L++ + ++++QAGA G+L K + EV+ AI +V +G Sbjct: 65 AETTEKALALEPGLKVITLSMFGDENYYSRMVQAGAKGFLMKDSPMDEVLRAIETVAAGG 124 Query: 123 RYIASDIAQQMALS-QIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Y ++ + +A Q E LS RE++I++ + +G EI+++L +S +TV Sbjct: 125 TYFCEEVLRSLASRMQTAVSGYEGSDERLSTREIEILVCVCRGLSNQEIADELFISKRTV 184 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 + +R + K L A+RHGL + Sbjct: 185 DKHRANILEKTGCKNTASLVVYAVRHGLVD 214 >UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 Tax=Bacteria RepID=Q3Z8L1_DEHE1 Length = 224 Score = 267 bits (685), Expect = 1e-70, Method: Composition-based stats. Identities = 69/218 (31%), Positives = 120/218 (55%), Gaps = 3/218 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VLL DDH +VR G R +++ G+ VVGEAS G +AV+ DVV+MD++MP + Sbjct: 6 MIKVLLADDHVIVREGTRELIQRESGMMVVGEASDGVEAVEMSMKVHPDVVVMDIAMPRL 65 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EAT++I + I++LT + +++AGAA +L K +++ AIR+VY+ Sbjct: 66 NGIEATKQIKQLLPTTAILILTAYESEQYILAILEAGAASFLLKNVKGTQLLEAIRAVYA 125 Query: 121 GQRYIASDIAQQMALSQIEPEKTE---SPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 G+ + +++ I S L++RE++++ M +G +I++QL LS Sbjct: 126 GESVLQPSTTRRVIDQLINKATKTEEVSAVNPLTDREIEVLKMAARGVSNKDIADQLYLS 185 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETL 215 +T+ ++ +F KL++ E ++ G E L Sbjct: 186 NRTIQTHLSNIFKKLSVGSRTEAILYGLKRGWFIMEDL 223 >UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04VJ6_LEPBJ Length = 221 Score = 267 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 61/217 (28%), Positives = 113/217 (52%), Gaps = 9/217 (4%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 + LVDDH ++R G++ IL ++ GE+ E A+ D+V+ D+SMPG+ G Sbjct: 7 KIFLVDDHAILREGLKMILSGQ--FEICGESGDAEKALDQIGKLNPDLVITDISMPGLSG 64 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 ++ + + + +++ I+L+ H K+++ G GY+ K A +++ AI +V+ G+ Sbjct: 65 IDLVKNLRKQYPNIRTIILSRHDNREYVQKLLELGINGYVLKDDAGNDLLRAIEAVHKGE 124 Query: 123 RYIASDIAQQMALSQI-------EPEKTESPFASLSERELQIMLMITKGQKVNEISEQLN 175 Y++ I + E + + F+ LS+RE +I+ ++ +G I + L Sbjct: 125 TYLSPGITAHFLSGFVGSGKPGEENQDAKKAFSVLSDREREILKLVAEGNSNESIGKILG 184 Query: 176 LSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 +SP TV +R + KLN+H +L AIR GL + Sbjct: 185 ISPATVKVHRANIMKKLNLHKVADLVMYAIRAGLIES 221 >UniRef50_UPI0001B502C9 two component LuxR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B502C9 Length = 229 Score = 267 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 69/215 (32%), Positives = 121/215 (56%), Gaps = 4/215 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + VL+ DDH +VR G+R IL IKVVGE + G +AV+ R DVVLMD+ MP + Sbjct: 3 LRVLIADDHAVVRQGLRMILGLDNEIKVVGETTNGREAVRLARELCPDVVLMDLLMPVMD 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ AT +I + +V+++ LT ++ + ++AGA G+L K A ++ +A+++ +G Sbjct: 63 GVSATAEIRQDIPEVEVVALTSSLDDAMVMGAVRAGAIGFLLKNAEADDLRNAVKAAAAG 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Q +++ ++ EP E L+ERE +++ M+ +G+ EI+ L + +TV Sbjct: 123 QIHVSPAAISRLMGQVREPSGPE----QLTERETEVLTMLARGKANKEIARDLRIGQQTV 178 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLS 216 +Y + +KL +H + A++ GL A L+ Sbjct: 179 KTYVSHILTKLGVHSRTQAAVYAVQSGLVPAGELT 213 >UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides sp. JS614 RepID=A1SGL7_NOCSJ Length = 213 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 75/210 (35%), Positives = 115/210 (54%), Gaps = 3/210 (1%) Query: 5 LLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGLE 64 L+VDD EL R G+ +L GI+VVGEA G + T A DVVL+D+ MP G+E Sbjct: 2 LVVDDQELFRRGLTMLLGTEAGIEVVGEAGDGVEGTNLAATAAPDVVLLDIRMPKRSGIE 61 Query: 65 ATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQRY 124 A I + KIIMLTV E + +++GA+GYL K ++ +EV A+R V GQ Sbjct: 62 ACLAIKEAVPSAKIIMLTVSDEEADLYEAVKSGASGYLLKDSSIEEVAQAVRVVADGQSL 121 Query: 125 IASDIAQQMAL---SQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 I+ +A ++ PE+ P L+EREL+++ ++ KG EI+++L +S TV Sbjct: 122 ISPSMAVKLIDEFKQMSRPERDHVPGLRLTERELEVLRLVAKGMNNREIAKELFISENTV 181 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++ + KL +H +E A++ L Sbjct: 182 KNHVRNILEKLQLHSRMEAVMYAVKEKLLE 211 >UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QSJ5_9RHOB Length = 212 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 120/210 (57%), Gaps = 2/210 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLL DDH LVR GIR L + I+VVGEA+ G +AVK DV+LMD+SMP + Sbjct: 5 IRVLLADDHALVRDGIRARLNKVPEIEVVGEATNGREAVKLAHELRPDVLLMDVSMPVMN 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLEA ++ +S ++ +++L+++ + V+QAGA GY+ K + E+++AI SV SG Sbjct: 65 GLEAAAEVRKSFPEIAVLILSIYDNSEYVRGVVQAGARGYILKDISAPEMITAISSVASG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Y +S + + E P+ L++RE Q++ I KG E+++ L +S +TV Sbjct: 125 GYYFSSAVGPTLV-GTATSAPIEDPY-GLTDRERQVLTAIAKGLPNKEVAKSLGISVRTV 182 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 S+R + K+ +L +A GL + Sbjct: 183 ESHRLNLREKVGNKNAAQLYKVAQDLGLLD 212 >UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7D2_9BACL Length = 227 Score = 266 bits (682), Expect = 3e-70, Method: Composition-based stats. Identities = 65/214 (30%), Positives = 121/214 (56%), Gaps = 5/214 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWC----RTNAVDVVLMDMSM 57 I V++VDDH++VR G++ L G +V+ EA G +AV+ R D++LMD+ M Sbjct: 13 IKVMIVDDHDMVRMGLKTYLMQDPGFEVIAEAGDGREAVELLERGLREGQPDIILMDLMM 72 Query: 58 PGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRS 117 PG+ G EAT+++ D+KI++LT E+ L + ++AGA Y+ K + +E++ A++ Sbjct: 73 PGMNGAEATKEVRSRFPDMKIVILTSFLEDDLVVQAVEAGAVSYVLKTVSAEELIYALQG 132 Query: 118 VYSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 Y G + ++AQ + + + + ++ERE +++L+I +G+ +I+E+L++S Sbjct: 133 AYRGMPVMTGEVAQALTRG-LRQRTVQGDDSGMTEREKEVLLLIAEGKSNKDIAEELHIS 191 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 KTV ++ + K + +L A R G Sbjct: 192 IKTVKTHVSNLLMKCELEDRTQLAIYAHRQGWVG 225 >UniRef50_B0C756 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C756_ACAM1 Length = 224 Score = 266 bits (682), Expect = 3e-70, Method: Composition-based stats. Identities = 65/208 (31%), Positives = 115/208 (55%), Gaps = 1/208 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLLVDD ++VR G++ I + I++VGEA G+ A+ +T DV+LMD++MP + Sbjct: 8 IRVLLVDDEDIVRYGLKAIAQGTPEIEIVGEAGSGKAAIAQAKTLQPDVILMDINMPQMD 67 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ AT++I+R K+++LT H E + MQ GA GYL K P++ + +I+ + G Sbjct: 68 GVTATQEISRIQPHAKVLILTTHDEAEYLVEAMQQGAVGYLLKNTPPEDFIQSIQQAHKG 127 Query: 122 QRYIASDIAQQMALSQIEPEKTE-SPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 + + Q++ P + + F ++ RE ++ ++ G EISE L+++ KT Sbjct: 128 YLQLGPGLGQKLCQLLKTPVRPQIEAFEGITPREQDVLKLVATGASNREISETLHITEKT 187 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHG 208 V ++ + S++ + +L A G Sbjct: 188 VKNHVSSILSRVGVQSRTQLAIWANSAG 215 >UniRef50_C6E3E1 Two component transcriptional regulator, LuxR family n=4 Tax=Deltaproteobacteria RepID=C6E3E1_GEOSM Length = 223 Score = 266 bits (682), Expect = 4e-70, Method: Composition-based stats. Identities = 62/217 (28%), Positives = 115/217 (52%), Gaps = 5/217 (2%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 VL+VDDH L R G++ ++E + VGEA CG +A+ + D+V MD+S+P + G Sbjct: 5 RVLIVDDHPLFREGVKSLVERSANYQAVGEAGCGAEALALAQELKPDLVTMDVSLPDMSG 64 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 +E R I + +I+ML+++ + A+ +AGA GY+ K ++ ++ G+ Sbjct: 65 IEVVRGILDLAPETRILMLSMYPKFDYVAEAFKAGAKGYVVKETTTARLIQGFDALCRGE 124 Query: 123 RYIASDIAQQMALSQIEPEKTESPFAS-----LSERELQIMLMITKGQKVNEISEQLNLS 177 ++ ++Q + + + L+ RE Q++ ++ +G +I+ + LS Sbjct: 125 FFVDGQVSQDLVAKLAQGAARDQALQDEKYGLLTPREQQVLRLVAEGSSTRQIAAAIELS 184 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 PKTV ++R + KL++H +EL A R GL + E+ Sbjct: 185 PKTVENHRTNLMKKLDVHSKMELVKYAARLGLIDVES 221 >UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NY27_AZOSE Length = 215 Score = 266 bits (681), Expect = 4e-70, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 122/210 (58%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I ++L DDH++ R +R +LE GI++VGEAS G++ + VD+ +D+ MPG+ Sbjct: 3 IRIVLADDHQMFRHALRAMLEKEPGIRIVGEASNGDELIDLISHQPVDIACVDIGMPGMN 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR++ V++I L+ ++ ++ AGA GY++K A +E++ AI +V Sbjct: 63 GIEATRRLLAIRPHVRVIGLSAFSDRQFVLDLLNAGATGYVTKAEAGEELLRAIHTVQQS 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + Y+ D+A + + ++ + ++ RE Q++ +I +G I+++L+L+P TV Sbjct: 123 KTYLCPDVAATVTNALLDNAPKDISAPRITARERQVLQLIAEGYTSTRIADRLHLAPSTV 182 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 +R + KL++H ELT AIR G+ Sbjct: 183 EVHRRNIMRKLDLHSVAELTKYAIRSGITT 212 >UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=C4L5Q6_EXISA Length = 230 Score = 266 bits (681), Expect = 5e-70, Method: Composition-based stats. Identities = 57/223 (25%), Positives = 118/223 (52%), Gaps = 14/223 (6%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 + +VDDHEL R G++RI + VV E G +A++ ++++MD++MP + G Sbjct: 7 RIAIVDDHELFREGLKRIFDLEDEFTVVAEGRTGREAIRIAGEQKPEILIMDINMPDMNG 66 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 +EAT++++ + + ++++L++H + ++AGA+G+L K A E++SA+R+V Sbjct: 67 IEATKQLSLLSPETRVLILSIHDDESYITHALEAGASGFLLKEVASTELISAVRAVAKDG 126 Query: 123 RYIASDIAQQM--------------ALSQIEPEKTESPFASLSERELQIMLMITKGQKVN 168 Y+ + + A +E + + LS RE++++ ++ G+ Sbjct: 127 AYLHPKVTTNVLKEYRRLLQFKGEQAGRGVESRTDDPVYQLLSRREVEVLHLLADGRSNR 186 Query: 169 EISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 +IS+ L +S KTV ++ + K++++ + AIR G Sbjct: 187 DISDMLFISEKTVKNHVSSVLRKMDVNDRTQAVVDAIRRGWVE 229 >UniRef50_C7RMN3 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMN3_9PROT Length = 213 Score = 265 bits (680), Expect = 5e-70, Method: Composition-based stats. Identities = 74/208 (35%), Positives = 130/208 (62%), Gaps = 2/208 (0%) Query: 4 VLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGL 63 +LLVDDH +VR G+R +L ++VV EA E A+ R N DV L+D+ +PG GGL Sbjct: 8 ILLVDDHAVVRGGLRLLLAQTDDMEVVSEAENAEQAISMIRQNEFDVALVDIGLPGKGGL 67 Query: 64 EATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQR 123 + ++I + ++ML+++ E + ++AGA+GYL+K + P +++AIR V G R Sbjct: 68 DLLKQIKAERPRIAVLMLSMYAEEVYAVRALKAGASGYLTKNSPPGTLLAAIRKVAGGGR 127 Query: 124 YIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVNS 183 +++ + +Q+A+ + K+ S +LS+RE++++ + G+ + +I+E L+LSPKTV + Sbjct: 128 HVSPALLEQLAVEVGQGRKSAS--DALSDREIEVLRRLASGESLTQIAEALHLSPKTVTT 185 Query: 184 YRYRMFSKLNIHGDVELTHLAIRHGLCN 211 YR R+ K +H + ELT A+ G+ + Sbjct: 186 YRARIVEKTGLHSNAELTRYALDKGMLS 213 >UniRef50_A0L9F1 Two component transcriptional regulator, LuxR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9F1_MAGSM Length = 206 Score = 265 bits (680), Expect = 6e-70, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 128/210 (60%), Gaps = 4/210 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +++ DDH + R G+ +L + +++VGEA G+DA++ R DV L+D+SMPG+ Sbjct: 1 MIRIIMADDHTIFRQGLAHLLSAHQELEIVGEAGRGDDALQLIRDLNPDVALLDISMPGL 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GL+ +++ ++++LT+H + L K QAGA GY+ K A E++ AI +V + Sbjct: 61 NGLDVVKRVVEEKRPTRLLLLTMHDDPTLAIKAEQAGALGYVVKDNAFSELLDAILAVAA 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+R+++ +A+++ E E+ + LS RE +++ ++ GQ EI+ L +SPKT Sbjct: 121 GKRFVSEVVAEKV----NELERLDDLPVQLSPREKEVVRLVADGQTNKEIARSLGISPKT 176 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 V+++R R+ KLN+H ++ A+R GL Sbjct: 177 VDTHRTRLMRKLNLHTTADVVRYAMRMGLV 206 >UniRef50_A4VZN8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=52 Tax=Bacilli RepID=A4VZN8_STRS2 Length = 213 Score = 265 bits (680), Expect = 6e-70, Method: Composition-based stats. Identities = 68/212 (32%), Positives = 118/212 (55%), Gaps = 4/212 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V+LVDDHE+VR G++ L ++VV EAS GE+ + DVV+MD+ MP + Sbjct: 4 IRVMLVDDHEMVRLGLKSYLNLQPDVEVVAEASDGEEGLAKALEVKPDVVVMDLVMPKMT 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EAT + + +I++LT + +N V++AGA GY+ K ++ E+++AIR V G Sbjct: 64 GVEATLALLKEWPQAQIVILTSYLDNEKIYPVLEAGARGYMLKTSSADEILAAIRKVALG 123 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + I +++ +++ + P L+ RE +I+ ++ KG I+++ +S KTV Sbjct: 124 EYAIETEVEKKVEHHKRHP----DLHDDLTAREREILTLLAKGYDNQRIADESFISLKTV 179 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 ++ + SKL + + A +HGL E Sbjct: 180 KTHVSNILSKLAVSDRTQAVVYAFQHGLVAQE 211 >UniRef50_B2J8J5 Two component transcriptional regulator, LuxR family n=3 Tax=Cyanobacteria RepID=B2J8J5_NOSP7 Length = 211 Score = 265 bits (680), Expect = 6e-70, Method: Composition-based stats. Identities = 67/209 (32%), Positives = 110/209 (52%), Gaps = 8/209 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +LL DDH ++ + L+ + V+G A G +A++ + DV LMD+ MP + Sbjct: 9 IRILLADDHPILGQALTMFLQCESDMTVIGHAGDGREALELFHQHQPDVALMDLRMPKME 68 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G +A I +I++LT + + ++AGA GYL KGA P E++ AIR+V+ G Sbjct: 69 GADAIAAICAKFKHARIVVLTTFDGDEDIYRGLRAGAKGYLLKGAEPNELLDAIRTVHKG 128 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Q+YI IA ++A LS+REL+++ +I KG+ +IS LN++ TV Sbjct: 129 QKYIPPTIAAKLAERMSS--------EELSDRELEVLRLIAKGKNNQQISNVLNIAESTV 180 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 + +F KLN+ + A+ G+ Sbjct: 181 RFHTNNIFGKLNVSDRTQALVTALNRGIV 209 >UniRef50_A3CKH3 Two-component system transcriptional regulator (CheY domain and HTH-like DNA-binding domain), putative n=30 Tax=Bacteria RepID=A3CKH3_STRSV Length = 227 Score = 265 bits (680), Expect = 6e-70, Method: Composition-based stats. Identities = 71/220 (32%), Positives = 113/220 (51%), Gaps = 7/220 (3%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VL+ DD L+R ++ IL I+VVG G++ ++ DV+LMD+ MP + Sbjct: 1 MIKVLIADDQALIRESLQIILSAHADIEVVGTVGDGKEVLEKLHRVRPDVILMDIRMPVM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+ T+ + DVKII+LT ++ ++ GA+GY+ KG + +E+ AI++VY Sbjct: 61 DGVLCTKAVKEQYPDVKIIILTTFDDDEFIFSALKYGASGYILKGVSTEELHEAIQTVYR 120 Query: 121 GQRYIASDIA-------QQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQ 173 G I +IA QMA S TE +S E +I+ I G EI+ + Sbjct: 121 GGAMINPNIATKVFKIFSQMAQSNFAITVTEENIEDMSRTEWKIIQQIGFGISNKEIAAK 180 Query: 174 LNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 L LS TV +Y + +KLN+ +L A++ G+ + Sbjct: 181 LFLSEGTVRNYLSGILAKLNLRDRTQLAIWAVQTGVTQRD 220 >UniRef50_A7HA46 Two component transcriptional regulator, LuxR family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HA46_ANADF Length = 212 Score = 265 bits (680), Expect = 6e-70, Method: Composition-based stats. Identities = 76/212 (35%), Positives = 124/212 (58%), Gaps = 4/212 (1%) Query: 5 LLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGLE 64 ++ DDHE+VR G+R ++E G V GEAS G +AV+ + DVV++D++MP + GLE Sbjct: 1 MVADDHEVVRRGVRALVESHPGWTVCGEASNGREAVRLAQELRPDVVVLDVTMPELNGLE 60 Query: 65 ATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQRY 124 ATR+I S D +II+LTVH + L + + AGA GY+ K A + +V AI ++ Y Sbjct: 61 ATREIRASVPDTEIILLTVHDSDQLLGQALDAGARGYVLKEDAARHLVDAIDALSKHAPY 120 Query: 125 IASDIAQQMALSQIEPEKT----ESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 + S A++ + + T SL++RE +++ ++ +G E++ QL++S KT Sbjct: 121 VPSRAAERPGNAAAQERNTVVSRGGRVTSLTQREREVLRLLAQGDSNREVAGQLSISAKT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 V ++R + KL V+L H AIR+G+ Sbjct: 181 VETHRANVMRKLGASSIVDLVHYAIRNGIVEP 212 >UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR family n=10 Tax=Bacteria RepID=Q1IXN1_DEIGD Length = 221 Score = 265 bits (680), Expect = 6e-70, Method: Composition-based stats. Identities = 68/213 (31%), Positives = 112/213 (52%), Gaps = 4/213 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + VLLVDDH +VR G+R L I+VVGEA+ GE+A+ DVV+MD+ MP + Sbjct: 10 VRVLLVDDHAVVRQGLRLFLSLDSQIEVVGEAANGEEALAAAERLHPDVVIMDLMMPVMD 69 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++ATR + R D ++I LT E + AGA GY+ K A+ + AI + G Sbjct: 70 GIQATRLLRRQHPDTEVIALTSTLEEHKVNGAIDAGAMGYMLKDASSDTLADAIHAAARG 129 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + + + A+++ PE E +L+ +E+ ++ +I +G +I+ ++ TV Sbjct: 130 EVRLHPEAARRLVRDFRTPEMRE----TLTPKEVIVLQLIARGYSNRDIARDQGVTEATV 185 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 ++ R+ KL + + A+RHGL E Sbjct: 186 KTHVSRLLGKLGLESRTQAALYALRHGLARLEE 218 >UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6Y1_9BACT Length = 220 Score = 265 bits (679), Expect = 7e-70, Method: Composition-based stats. Identities = 69/211 (32%), Positives = 122/211 (57%), Gaps = 3/211 (1%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 +LL DDH++VR G+R +LE ++ EAS G AV++ A D+V++D+SMP + G Sbjct: 8 RILLADDHDIVRRGLRTLLELRSDWEICAEASDGRAAVQFAEDLAPDIVILDLSMPELNG 67 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 LEA R+IA +++MLT+H + + AG GY+ K A +++ +A+ ++ G+ Sbjct: 68 LEAARRIAAHCPRSRMLMLTMHETEQFVREALAAGVRGYILKTDAGRDLANAVDALIRGE 127 Query: 123 RYIASDIAQQMA---LSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 + AS +A + + + + A L+ RE +I+ ++ +G+K ++ + LN+S K Sbjct: 128 TFFASRLAATIYAAEFAGMGRRRRSKSQAGLTPREREILQLLAEGRKNRDVGKALNISVK 187 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 T ++R R+ +KL I +L AIR+GL Sbjct: 188 TAETHRARIMAKLGIDSVADLVRYAIRNGLI 218 >UniRef50_C4ZEG3 Two-component response regulator (Extracellular proteinase response regulator) n=3 Tax=Bacteria RepID=C4ZEG3_EUBR3 Length = 214 Score = 265 bits (679), Expect = 8e-70, Method: Composition-based stats. Identities = 61/210 (29%), Positives = 117/210 (55%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 IN+++ DDH ++R G++ +LE IKV+ EA GED + +T DV+L+D++MP + Sbjct: 3 INIMITDDHSMIREGLKNLLELDGDIKVIAEAENGEDCLDKLKTFRPDVLLLDINMPKMN 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLE + + + VK+++LTVH E K + G GY+ K + E+ AI ++ G Sbjct: 63 GLEVLKALKDRKSKVKVLVLTVHNETEYLMKAVDIGINGYVLKDSESAELKKAIFTIADG 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + YI + + I+ + E +L++RE++++ + G+ +I++++ +S +TV Sbjct: 123 ETYIQPSLIPALNSKMIQKNEDELKIDALTKREMEVLKEMAVGKFNRDIAKEMKISERTV 182 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++ +F KL + + AIR+ + Sbjct: 183 KNHISSIFKKLEVTDRTQAAVFAIRNNIIQ 212 >UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ8_HALOH Length = 209 Score = 265 bits (678), Expect = 9e-70, Method: Composition-based stats. Identities = 56/211 (26%), Positives = 111/211 (52%), Gaps = 3/211 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI V LVDDH V G++ L +GI++VG + GE A+K +V ++D+ +PG+ Sbjct: 1 MIQVYLVDDHPFVLQGLKAYLNTREGIEIVGTSGNGEKAIKEIAKLNPEVAVVDLRLPGL 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+E TR+I + ++I+L+ + + + AGA Y+ K + P+++V AI++ Sbjct: 61 NGIEVTREIKKKNPGTEVIILSSFNKEDEVIEAIDAGALSYVMKDSRPEKLVEAIKAARR 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+ + +A+++ + P L+ RE +++ + +G +I++ L +S T Sbjct: 121 GEPVLTPGVAKKIMKRAARKGRKTEP---LTPREKEVLACLVRGNSNRDIAKTLCISETT 177 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V ++ + KL++ + AI + L + Sbjct: 178 VKTHVSNILKKLDVKDRTQAVIKAIENNLVD 208 >UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridium RepID=C5RGJ7_CLOCL Length = 220 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 69/219 (31%), Positives = 115/219 (52%), Gaps = 10/219 (4%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MINV++ DD ++VR GI+ IL I V+GEA GE+ + + DV+LMD+ MP I Sbjct: 1 MINVIIADDQKIVREGIKMILSLYDEINVIGEAENGEELINLLQNFMADVILMDVRMPII 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EAT+ I K+I+LT E+ K ++ GA GYL K + +++AIRSVY+ Sbjct: 61 DGVEATKIIKERYIHTKVIILTTFNEDEYIFKAIKNGADGYLLKDVGSEFIINAIRSVYN 120 Query: 121 GQRYIASDIAQQMA----------LSQIEPEKTESPFASLSERELQIMLMITKGQKVNEI 170 G + ++ ++ + E + + SL+ RE+ + ++ +G+ +I Sbjct: 121 GAMLLDPEVTVKVVKAFNSITNESKNSNEFDNINNKLNSLTPREIDVAKLVAQGKSNKDI 180 Query: 171 SEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 L L+ TV +Y R+ KL ++ EL + G+ Sbjct: 181 CRSLFLTEGTVKNYVTRILGKLELNSRTELAVFINQAGI 219 >UniRef50_C4DCK3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=3 Tax=Actinomycetales RepID=C4DCK3_9ACTO Length = 214 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 113/210 (53%), Gaps = 2/210 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VLLVDD L+RAG+R + E I+VVGEA G+ AV+ D+VLMD+ MPG+ Sbjct: 1 MIRVLLVDDQRLIRAGLRMLCEPAADIEVVGEADGGQAAVRLAGELCPDLVLMDLRMPGM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+ AT++I +++ LT ++ + AGA G+L K +P E++ AIR Sbjct: 61 DGITATQRILAERPSTRVVALTTFDDDDHLYPALAAGACGFLVKDTSPNELLEAIRKAAD 120 Query: 121 GQRYIASDIAQQMALSQIEPEKT--ESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 G ++ + +++ S + + + L+ RE +++ ++ G +I+E+L+L Sbjct: 121 GDTPFSAGVVKRIVDSAVRARASVPTATLPKLTTREREVLALVGAGYANVDIAERLHLGV 180 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHG 208 TV ++ + +K V L LA+R G Sbjct: 181 TTVKTHIASLMTKTGCSNRVRLAVLAVRSG 210 >UniRef50_C7MLQ9 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=29 Tax=Actinobacteria (class) RepID=C7MLQ9_CRYCD Length = 261 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 71/215 (33%), Positives = 114/215 (53%), Gaps = 6/215 (2%) Query: 4 VLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGL 63 VL+VDD +LVR G + IL ++VVGEAS G +A + VVLMD+ MP G+ Sbjct: 45 VLIVDDQDLVRNGFKLILSSYDHVRVVGEASNGIEAYEQSLALRPQVVLMDIRMPVEDGI 104 Query: 64 EATRKIA--RSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 ATRKI + A ++++LT + +QAGA+G++ K A P ++V A+R+V +G Sbjct: 105 AATRKIVGDTALAQTRVLVLTTFDIDEYVYDALQAGASGFMLKDAEPDDIVRAVRTVAAG 164 Query: 122 QRYIASDIAQQMALSQIEPEKTES----PFASLSERELQIMLMITKGQKVNEISEQLNLS 177 I I +++ + + S L++RE +I+ + +G EI++ L +S Sbjct: 165 DALIQPSITRRLIETFVSSRPRTSAAAGGLVDLTDREREILRFVARGMSNEEIADDLVIS 224 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 P TV ++ R+ KL+ H +L A GL Sbjct: 225 PATVKTHLARIMGKLDAHDRAQLVVAAYESGLVQP 259 >UniRef50_Q1AST2 Two component transcriptional regulator, LuxR family n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AST2_RUBXD Length = 232 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 67/214 (31%), Positives = 118/214 (55%), Gaps = 3/214 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +++VDDH+L+RAG R +LE +VVGEAS G +A++ CR DVV+MD++MPG+ Sbjct: 11 VRLIVVDDHDLIRAGFRLVLEQEPDFEVVGEASSGREAIELCRRLRPDVVVMDLAMPGVD 70 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLEATR+I V ++++T + + ++AGAAGY+ K + V+SA+R + SG Sbjct: 71 GLEATRRIKEEHPQVAVLVVTALEDPEYMLEALKAGAAGYVLKSSPLPRVISALRRLLSG 130 Query: 122 QRYIASDIAQQMALSQIEPEKTESPF---ASLSERELQIMLMITKGQKVNEISEQLNLSP 178 + + ++A ++ L+ RE ++++++ +G+ EI+ +L +S Sbjct: 131 ESPLNQELAARLIQDLARRPGGGGNPPPAEELTAREREVLVLMARGRTNPEIARELVISR 190 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 T S+ + KL + + A GL Sbjct: 191 GTAKSHVQNIIRKLGVSDRTQAVARAFELGLIEP 224 >UniRef50_B2JSN3 Two component transcriptional regulator, LuxR family n=28 Tax=Proteobacteria RepID=B2JSN3_BURP8 Length = 210 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 127/210 (60%), Gaps = 2/210 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +L+ DDH +VR G+++I+ I V EA+ G + V RT AVD++L+DM+MPGI Sbjct: 1 MIRILIADDHAIVRGGLKQIIATTNDIVVAAEAAQGSEVVDKLRTCAVDLLLLDMTMPGI 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G++ R++ + +++L++H E + ++ ++AGA GYL+K + P +++AIR + Sbjct: 61 SGVDLIRRVRAEQPALPVLVLSIHDEAQVASRALRAGATGYLTKDSDPDVLLAAIRKLAD 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G R+I + M + P LS+RE Q++ M+ G+ +NEI++ LS KT Sbjct: 121 GGRFIDPKLVDAMVFETHRGDM--PPHEVLSDREFQVLQMLAAGKSINEIADICALSAKT 178 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 +++++ R+ KL + + E+ AIRHGL Sbjct: 179 ISTHKMRLMQKLGLANNAEVIRYAIRHGLI 208 >UniRef50_C8WS10 Two component transcriptional regulator, LuxR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WS10_ALIAD Length = 224 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 71/211 (33%), Positives = 121/211 (57%), Gaps = 4/211 (1%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMP-GIG 61 V++VDDH LVR G+R IL + GI+VVGE SCGEDA+K + DV+LMD+ MP G+ Sbjct: 5 RVVIVDDHALVRQGLRLILHGVAGIEVVGECSCGEDALKAAVKDRPDVMLMDVHMPQGLD 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ R + + V++IMLT+ + K++ AG +G + K E+V+AI+ G Sbjct: 65 GITTARHLRQIAPQVRVIMLTMFDDRVHVEKMLDAGVSGIVFKHDDSSEIVAAIQHGQPG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Y++ Q+ + P +T LS RE ++++++ +G E+++ L++S KTV Sbjct: 125 HPYLSRRWGQRANAETVSPSRTA---ERLSPRETEVLVLLAQGYTNREVADALHISVKTV 181 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 ++R + ++ +H L A ++GL + Sbjct: 182 ETHRQHIMRRIGLHSRAALVRYAYQNGLVDP 212 >UniRef50_B1ZY58 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=B1ZY58_OPITP Length = 223 Score = 263 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 68/212 (32%), Positives = 115/212 (54%), Gaps = 8/212 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+VDDH +R G+ ++ G+ VV EAS GE+A++ DVVLMD+ MPG+G Sbjct: 20 IRVLVVDDHPPMRVGLVALIRSQPGMDVVAEASDGEEAIEIYDDLQPDVVLMDLRMPGMG 79 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA I + + ++I+L+ + + + +Q+GA YL K +E+ S +R+VY+G Sbjct: 80 GVEAILAIRKKAPEARVIVLSTYDWDEDIHRALQSGAKSYLLKDMPIEEIASTVRAVYAG 139 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + +A+++ L+ERE ++ + KG+ EI+ L +S TV Sbjct: 140 DTSLPRSVAERLTERAQR--------EQLTERERDVLESLIKGRSNKEIASSLCISEDTV 191 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 S+ +F+KL + AIRHG+ + + Sbjct: 192 KSHLKTLFAKLRVRDRTGAAIEAIRHGIVHLK 223 >UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V5Y3_9FIRM Length = 223 Score = 263 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 65/221 (29%), Positives = 119/221 (53%), Gaps = 9/221 (4%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +LL DDH L+R GI+R+L ++VVGEA G++A+ D++L+D++MPG+ Sbjct: 3 IRILLADDHALLRQGIKRVLNFEDDLEVVGEAEDGQEALARTLMLKPDILLLDINMPGLT 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GL+ +++ ++ + VKII LT+H + ++++ GA GYL K P ++ AI V G Sbjct: 63 GLDVAKQLKQARSRVKIIALTIHDSDNYVLELLKNGALGYLLKDVEPNVLIKAIHMVNEG 122 Query: 122 QRYIASDIAQQM---------ALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISE 172 ++ +A+++ + ES L+ RE+ ++ I KG +I + Sbjct: 123 NPFVYPKLAERLFGTSSISGDVGRMAKEIWDESRGERLTPREMDVLGCIAKGLSNQDIGK 182 Query: 173 QLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 L LS KTV ++ +F KL ++ + +++ + + E Sbjct: 183 ALGLSEKTVKNHLTSVFHKLKVNDRTQALVYVLKNKIVSLE 223 >UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR2_THEYD Length = 213 Score = 263 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 77/209 (36%), Positives = 128/209 (61%), Gaps = 1/209 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + VL+VDDH L R G++ IL D IK EA G +A+ + D+V +D++M I Sbjct: 5 LKVLIVDDHTLFRKGLKEILLDTPYIKECKEAKSGYEAIDILSKESFDIVFLDIAMSDIN 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+E +KI + KI+ML+++ E + ++ GA+GYL+K A P+E++ A+ + G Sbjct: 65 GIETLKKIKILYPETKILMLSMYPEEQYAIRSLKCGASGYLTKSADPEELLKAVDKIIKG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 +Y+ ++++ L I+ + P LSERE Q+ LMI KG+ + EIS++L++S KTV Sbjct: 125 GKYLPHTFSEKL-LHYIDKSEDIPPHEKLSEREFQVFLMIAKGKSLIEISKELSISIKTV 183 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 ++YR R+ KL + + E+ + AI+HGL Sbjct: 184 STYRARILEKLGLENNAEIINYAIKHGLI 212 >UniRef50_C6D0G6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=C6D0G6_PAESJ Length = 225 Score = 263 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 63/212 (29%), Positives = 110/212 (51%), Gaps = 9/212 (4%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +LL DDH++V GI L ++VGEA G++AV+ D+VLMD++MP + Sbjct: 3 IKILLADDHQIVLKGISFFLAMQPDFELVGEAHNGKEAVEKAGELQPDIVLMDLNMPIMD 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA+ I +K+++LT + +Q GA GY+ K P ++ AIRS Y G Sbjct: 63 GIEASALIKEQHPHIKVLVLTSFADQSHIVPALQTGAIGYMLKDVEPDQLAEAIRSAYKG 122 Query: 122 QRYIASDIAQQMALSQ---------IEPEKTESPFASLSERELQIMLMITKGQKVNEISE 172 + DI++ + I+ + +L+ REL+++ ++TKG +I++ Sbjct: 123 NIQLHPDISRALLSRPEPEPRPEPVIQHSNRDKSLEALTPRELEVLELLTKGLSNKDIAQ 182 Query: 173 QLNLSPKTVNSYRYRMFSKLNIHGDVELTHLA 204 L ++ KTV ++ + SKL++ + A Sbjct: 183 TLIVAEKTVKTHVSSILSKLDLSDRTQAALFA 214 >UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomycetales RepID=A4XCA4_SALTO Length = 235 Score = 263 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 73/215 (33%), Positives = 126/215 (58%), Gaps = 4/215 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 +I VL+VDD LVR+ +R ++ ++ + + GEA GE+AV+ R DVVLMD+ MPG+ Sbjct: 2 IIEVLVVDDQPLVRSALRMVVAEVDDMVIAGEAETGEEAVRLTRELKPDVVLMDLRMPGM 61 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GG+EAT +I R + + ++++LT E+ +QAGAAG+L K + +++ A+R+V Sbjct: 62 GGIEATGQIVRLSPETRVLVLTTFDEDDHVFGALQAGAAGFLIKNMSLDDILDAVRTVAH 121 Query: 121 GQRYIASDIAQQMA----LSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNL 176 G +A + +++ ++ P P + ++ERE +++ ++ +G +EI+++L L Sbjct: 122 GNGLLAPSVTRRLIKHVVDTRTAPTVPRRPLSGITEREREVLTLVGRGLSNSEIADELRL 181 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 S TV +Y R+ SKL V L A GL Sbjct: 182 SHATVKTYITRLLSKLGARDRVHLVIAAYEAGLAT 216 >UniRef50_Q5WI37 Two-component response regulator n=5 Tax=Bacillaceae RepID=Q5WI37_BACSK Length = 210 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 115/210 (54%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VLL +D +VR G++ ++E + IKV GEA G A++ C T+ DV ++D+ MP + Sbjct: 1 MIKVLLAEDQVMVRQGLKAMIETDEDIKVTGEADDGRKALRLCETHVFDVAILDIRMPEM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EA + + +KI+MLT ++ + ++ G GY+ K + ++ +I+S + Sbjct: 61 DGIEAAKMMRLRYPKMKILMLTTFDDHQYVVESLKLGVNGYMLKNGDTESLIRSIKSTIN 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G + +A ++ + ++ ++ S SL+ RE I+ I +G EI+E+L LS T Sbjct: 121 GGLSLEDQVAAKVVPTLLQNQEEPSIDPSLTPRERAILTCIGEGLNNKEIAERLGLSVGT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 V + +F KL + +L AIRH L Sbjct: 181 VKNQTSHIFDKLALRDRTQLAIYAIRHRLV 210 >UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NIZ3_ROSCS Length = 230 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 75/210 (35%), Positives = 120/210 (57%), Gaps = 2/210 (0%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 VL+VDDHEL RAG+ +L GI+VVGEA G A+ + + VD+V+MD+ MP I G Sbjct: 15 RVLIVDDHELARAGLAAVLACEPGIEVVGEADNGAAALDFVARHPVDLVMMDLQMPVIDG 74 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 +EATR+I + IIM+TV + + ++AG AGYL K A+ +E++ A+R V G+ Sbjct: 75 IEATRRIKALHPAIGIIMVTVQAKPDALMEALRAGVAGYLLKDASRREIIGAVRQVLRGE 134 Query: 123 RYIASDIAQQMA--LSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 ++ D+ Q L+ P +P L+ RE Q++ ++ +G+ EI+ +L +SP T Sbjct: 135 AFLNPDLVLQTLRRLAHATPTDDATPIEPLTPREQQVLRLLMQGKTNREIARELIISPGT 194 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 V + + +KL + + A+ GL Sbjct: 195 VKVHVEHIIAKLGVSDRTQAAVRALELGLV 224 >UniRef50_B5JFN7 Response regulator receiver domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFN7_9BACT Length = 220 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 59/216 (27%), Positives = 114/216 (52%), Gaps = 7/216 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I ++L DD L G++ +L +++VGE G++A++ CR +VLMD++MP + Sbjct: 5 IQIVLADDQALFLEGLKTLLSLDDSLEIVGECHNGQEALEACRRLRPQIVLMDLNMPVMD 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ AT+ I + +V ++ LT ++ + ++AG++GYL K +++V AIR+V SG Sbjct: 65 GVAATKAIKQELPEVNVLTLTTFDDDERVFEALKAGSSGYLLKDTPSKQLVEAIRAVSSG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTES-------PFASLSERELQIMLMITKGQKVNEISEQL 174 + ++ IA ++ + LS+RE Q+++ +++G EI+ L Sbjct: 125 ESFLQPSIASKVLAEFSRMSGPAAVKKAPVQLREPLSQREEQVLVWLSRGCSNKEIASHL 184 Query: 175 NLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 +L+ TV ++ + KL + + +A GL Sbjct: 185 DLAEGTVKNHVSNVLGKLGVLDRTQAALMARDLGLV 220 >UniRef50_Q1LE49 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderiaceae RepID=Q1LE49_RALME Length = 264 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 66/212 (31%), Positives = 122/212 (57%), Gaps = 3/212 (1%) Query: 4 VLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGL 63 VL+V+DH L+RAG+R +L G V GEA G +A + + D++LMD+S+PG+ G+ Sbjct: 7 VLIVEDHNLLRAGLRSMLSAQMGYHVAGEARDGREACQLAISLCPDLILMDLSLPGMNGI 66 Query: 64 EATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQR 123 +A I R + ++II L+VH + + ++AG GY+ K + ++V+A+R V G++ Sbjct: 67 DAIAAIKRRSPGIRIIALSVHQNDEYVREALRAGVDGYVLKDTSFDDLVTAMRVVLLGKK 126 Query: 124 YIASDIAQQMALSQIEPEK---TESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 +++ ++ + S + + ++ + L+ RE ++ ++ +G+ ++ +NLSPKT Sbjct: 127 HLSPELYGNLVESYVSGHEMSTAKTGWDLLTARERSVLKLVAEGRSNRQVGIYMNLSPKT 186 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 + YR + KL I EL +AI GL + Sbjct: 187 IEKYRASLMRKLGITNLTELVLIAISMGLITS 218 >UniRef50_D1CF52 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=D1CF52_THET1 Length = 1648 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 70/209 (33%), Positives = 120/209 (57%), Gaps = 3/209 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + V++ DDH L R GI+ +LE G ++VGEAS G++AV+ + D+VLMD+SMP +G Sbjct: 1439 LRVVIADDHALFRDGIKSLLESE-GFQMVGEASNGQEAVELVHNLSPDLVLMDLSMPVMG 1497 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GL+A R I+ VK+I+LT E+ + ++AGA G++ K +E +R+V G Sbjct: 1498 GLDAIRLISADKPSVKVIVLTASEEDKDLFEAIKAGAQGFIPKNLESEEFFQLLRNVIRG 1557 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQ-KVNEISEQLNLSPKT 180 + I +A ++ P ++ S L++RE +I+ ++ G ++S QL +S T Sbjct: 1558 EPAITPRLAGKLIDEFSRPVRSSS-LQMLTDREQEILQLLVNGVTSTKDLSRQLGVSEHT 1616 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 V + + SKL++ ++ A++HGL Sbjct: 1617 VKYHLRNILSKLHLQSRAQVVAWAVQHGL 1645 >UniRef50_C1TL94 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL94_9BACT Length = 215 Score = 263 bits (673), Expect = 3e-69, Method: Composition-based stats. Identities = 74/213 (34%), Positives = 128/213 (60%), Gaps = 2/213 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +++ DDHEL G+R IL + V+ A G++A++ + DVV+MD++MP + Sbjct: 1 MIPLIIADDHELFLEGVRDILSREDDLDVLALARTGQEALELTLQHHPDVVVMDVTMPKM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EA+R+I S DVKI+ L++H + L A++++AGA+GY K + +E++ AI V S Sbjct: 61 NGIEASRRIKSSLGDVKILALSMHADKRLIAEILKAGASGYALKEGSSEELIRAIHIVSS 120 Query: 121 GQRYIASDIAQQMALSQIE--PEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 G+ Y++ IA + ++ S + LS+RE +++ ++ KG E++ L++S Sbjct: 121 GETYLSPKIASILIKDYLKLLDTAVPSRASLLSDREREVLALLAKGSSTKEVASSLHISK 180 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 TV+++R R+ KL+ EL AIR GL + Sbjct: 181 NTVDTHRRRIMEKLDCGNIAELIRFAIREGLID 213 >UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromonadales RepID=Q485W6_COLP3 Length = 215 Score = 263 bits (673), Expect = 4e-69, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 120/210 (57%), Gaps = 4/210 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 ++V +VDDH +V+ G++ L I +VG G DA+ DV+LMD+SMP + Sbjct: 9 VSVQIVDDHPMVQGGLKACLSFYDDIIIVGSTDDGSDALNKAIELKPDVILMDISMPTMN 68 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++AT I + K+++L++H+ +QAGA GYL K +E+ AI++V +G Sbjct: 69 GIDATEIITEQLPETKVLILSMHSNPEFVKSAIQAGAVGYLLKDTTSEEIYYAIKAVANG 128 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + + +S IA+ + + + ++E L+ RE ++ + KG+ EI++ LN+S +TV Sbjct: 129 KTHFSSSIAKLLIDNPVNTNESE----KLTTREQVVLSYLAKGKTSKEIAKILNISFRTV 184 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++R M +KL IH +L A++HG+ Sbjct: 185 EAHRRNMKTKLGIHSLAKLISYAVKHGIIK 214 >UniRef50_A3Y699 Putative two component system response regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3Y699_9GAMM Length = 226 Score = 263 bits (673), Expect = 4e-69, Method: Composition-based stats. Identities = 56/218 (25%), Positives = 110/218 (50%), Gaps = 5/218 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +++VDD LVR+G+ IL+ I+VV E + G +A++ + D++LMD+ MP + Sbjct: 3 IRIVIVDDQALVRSGLSMILDHQSDIEVVAECANGLEAIEAAKKYIPDLILMDIRMPEMD 62 Query: 62 GLEATRKIA-RSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GL AT I +I++L+ + + ++ GA+G++ K P E+V+A+ V Sbjct: 63 GLSATSAILGDLNIQTRIVILSTFDLDEYIYRALREGASGFILKDTPPDELVAAVHVVAQ 122 Query: 121 GQRYIASDIAQQMALSQIEPEKTESP----FASLSERELQIMLMITKGQKVNEISEQLNL 176 G + I +++ + E + + + L+ RE +I+ + G +EI+ +L + Sbjct: 123 GGALLTPSITKKLIGAFAELKPSHTNVTGHIDRLTTREKEILKNLALGFNNSEIASRLFI 182 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 TV ++ + SKL + + A +G+ + Sbjct: 183 GESTVKTHVSSLLSKLELRDRAQAVIFAYENGVIRVGS 220 >UniRef50_B2A6W2 Two component transcriptional regulator, LuxR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W2_NATTJ Length = 215 Score = 263 bits (673), Expect = 4e-69, Method: Composition-based stats. Identities = 67/214 (31%), Positives = 119/214 (55%), Gaps = 3/214 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I+VL+VDDH ++ G+ +L ++V G+ ++A+ C+ DVVL+D+S+P Sbjct: 3 ISVLVVDDHAVLGKGLSMLLNSQDDMEVCGQVGTAKEALDTCKEKCPDVVLLDLSLPDKQ 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G E +++ S +++ LT+H + +V++AG GY+ K AA E++SAIRSVY G Sbjct: 63 GHEIIKELKESC-SARVLALTMHEDEAYFKRVVEAGGDGYILKKAADDELISAIRSVYQG 121 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFA--SLSERELQIMLMITKGQKVNEISEQLNLSPK 179 + + + + P+K LS+RE +++ +I G EI+E+L +S K Sbjct: 122 EVIVDKTFTKLLIDYYRNPDKQSGTEKNYDLSDREKEVLQLIALGYTNKEIAEKLYISIK 181 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 TV ++ R+ KL ++ EL A+R+ + + E Sbjct: 182 TVETHIARIKEKLGLNRRSELVRYAMRNNIISTE 215 >UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococci RepID=Q9RU37_DEIRA Length = 225 Score = 262 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 118/212 (55%), Gaps = 4/212 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + VLLVDDH +VR G+R L +GI+VVGEA+ GE+A++ +VV+MD+ MP + Sbjct: 14 VRVLLVDDHAVVRQGLRLFLGLDEGIEVVGEAANGEEALQEAERLRPEVVVMDLMMPVMD 73 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ ATR++ R D ++I LT E ++AGA Y+ K A+ + AI + G Sbjct: 74 GITATRELRRRLPDTEVIALTSTLEENKVNGAIEAGAISYMLKDASSDTLADAIHAAARG 133 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + + + A+++ PE ES L+ +E ++ ++ +GQ +I+ + +S TV Sbjct: 134 EVRLHPEAARRLVRDFRSPEMRES----LTPKETAVLQLLARGQSNKDIAAEQGVSEATV 189 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 ++ R+ SKL + + A+++G+ + E Sbjct: 190 KTHVSRLLSKLGLDSRTQAALYALKYGIASLE 221 >UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacillus RepID=C3BET8_9BACI Length = 216 Score = 262 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 63/214 (29%), Positives = 112/214 (52%), Gaps = 7/214 (3%) Query: 5 LLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGLE 64 ++VDD L+R G+ +L ++VVG A+ G++ V+ +++LMD+ MP I G+E Sbjct: 1 MIVDDQSLIRDGLAMLLNLRSELEVVGTANDGDEVVRIAEQLQPEIILMDIRMPRINGVE 60 Query: 65 ATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQRY 124 TR I D+K++MLT ++ L + ++ GA+GYL K +V AI +V++G Sbjct: 61 GTRLIRERFPDMKVLMLTTFNDSELIFEALEQGASGYLLKDMETDAIVQAILTVHAGGAV 120 Query: 125 IASDIAQQMALS-------QIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 + DI Q+ +I + L+ERE+ ++ I G EI+E+L ++ Sbjct: 121 LPQDITAQIVKELKRTKVVEISGQNQPKQVEQLTEREIDVLREIGLGLNNKEIAEKLFIT 180 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 TV ++ + SKL + + A+R+G+ Sbjct: 181 EGTVKNHVSNLISKLELRDRTQAAIYAVRYGITT 214 >UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C4B6_LISGR Length = 214 Score = 262 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 67/213 (31%), Positives = 121/213 (56%), Gaps = 3/213 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMP-GI 60 + +L+ DDH +VR+ ++ ++ K ++V+G+A+ G +A + +N D+VLMD+SMP G Sbjct: 1 MKLLIADDHAVVRSALKFMINAQKDMEVIGDAADGTEAFLFIESNRPDIVLMDLSMPPGE 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GL T++I + + K+I+LT+H E + +QAGA GY+ K ++ + ++ AIRSV Sbjct: 61 NGLLTTKRITEAFPETKVILLTMHDEEAYITQALQAGAQGYIMKNSSEELLLDAIRSVMG 120 Query: 121 GQRYIASDI--AQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 GQ I + + + +E+ LS+RE +I+ +I G EI+E+L +S Sbjct: 121 GQIIIDPVFNYSSKQIEQLKRADASENIIERLSKREKEILPLIALGYGNKEIAERLFISA 180 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 KTV ++ + KL + +L ++ L + Sbjct: 181 KTVEVHKSHIMKKLEMKKFSDLLRFCVKEQLID 213 >UniRef50_C3JVF4 Two component transcriptional regulator, LuxR family n=2 Tax=Rhodococcus erythropolis RepID=C3JVF4_RHOER Length = 220 Score = 262 bits (671), Expect = 6e-69, Method: Composition-based stats. Identities = 64/216 (29%), Positives = 112/216 (51%), Gaps = 6/216 (2%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI+VL+ DD ++VR G L I+VVG A G +A + R DVVLMD+ MP Sbjct: 1 MIDVLIADDQQVVRQGFELFLSGHPEIRVVGHAKTGVEAYEQVRALRPDVVLMDIRMPHG 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GL ATR++ ++I++T + + + +GAAG+L K A P+E+ SA+ +V Sbjct: 61 DGLTATREVLAEFPGTRVIVITTFDLDEYVFEALDSGAAGFLLKDADPEELSSAVLTVAE 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFAS------LSERELQIMLMITKGQKVNEISEQL 174 G ++ + ++ + + A LS RE+ ++ ++++G N+I++ L Sbjct: 121 GGSVLSPRLTSRLIVEFARRKPAPMSTARSGSDHGLSAREMDVVQLLSQGLGNNDIADSL 180 Query: 175 NLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 +L TV S+ + KL + V++ A R+ + Sbjct: 181 SLEQSTVKSHISNICKKLQVRTRVQIVIWAYRNNVI 216 >UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y1Z3_LEPCP Length = 235 Score = 262 bits (671), Expect = 7e-69, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 129/210 (61%), Gaps = 1/210 (0%) Query: 4 VLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGL 63 +L+VDDH +VR G++RILE VV EAS G A++ R +D+ ++D+SMPG+ GL Sbjct: 15 ILIVDDHVIVREGLQRILEATGAGWVVAEASSGFQALEVMRHQPIDLAIVDLSMPGMNGL 74 Query: 64 EATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQR 123 + ++I V++++L++H E + +AGA GY++K A E+V+A+R V +G Sbjct: 75 DLIKRIRTEFPRVRVLVLSMHAEEQYAMRAFKAGANGYVTKDGASAELVNAVRKVATGGA 134 Query: 124 YIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVNS 183 Y+ + +A+++ L Q+ T A LS+REL+++ I G+++ +I+E L+LS KTV++ Sbjct: 135 YVTASLAERVVL-QLNGATTAPGHAQLSDRELEVLRRIVAGERITDIAEALHLSVKTVST 193 Query: 184 YRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 ++ R+ KL + L + HGL + Sbjct: 194 HKSRIQEKLQLPTMAALIRYGMAHGLAQRD 223 >UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67MG8_SYMTH Length = 197 Score = 262 bits (670), Expect = 7e-69, Method: Composition-based stats. Identities = 67/197 (34%), Positives = 109/197 (55%), Gaps = 4/197 (2%) Query: 20 ILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGLEATRKIARSTADVKII 79 +L+ +++VGEA GE+AV+ + DVV+MD+S+P + G+EATR I + + ++I Sbjct: 1 MLQSEPDLELVGEAGRGEEAVELTKALKPDVVIMDISLPDMSGIEATRLIKEAVPETRVI 60 Query: 80 MLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQRYIASDIAQQMALSQIE 139 LT+H E P + ++AGA Y+ K +A ++V AIR+V GQ + + + + + Sbjct: 61 GLTMHEEEPFVLEFLRAGADAYIVKRSAAADLVGAIRAVMEGQAVLDPAVTRAVVEGYVS 120 Query: 140 PE----KTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIH 195 L+ RE +I+++I +G EI+ +L +S KTV ++R M KL IH Sbjct: 121 RPGRAVGQPEEPCPLTPREREILVLIAEGLTNAEIARRLYISEKTVQTHRSNMLDKLGIH 180 Query: 196 GDVELTHLAIRHGLCNA 212 EL AIR GL Sbjct: 181 DRTELVRYAIRQGLVEP 197 >UniRef50_Q13QW9 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderia RepID=Q13QW9_BURXL Length = 220 Score = 262 bits (670), Expect = 8e-69, Method: Composition-based stats. Identities = 75/208 (36%), Positives = 120/208 (57%), Gaps = 2/208 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I+VLLVDDH +VR G RR+LE + V GEA+ A + DVV+MD+S+PG Sbjct: 6 ISVLLVDDHAVVREGYRRLLELNADVHVCGEAADAAQAYQRFCALRPDVVVMDVSLPGAS 65 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA R++ D ++++ +VH E + + AGA GY++K +AP +V A+R++ Sbjct: 66 GIEAMRRMLAREPDARVLIFSVHEEAIFVRRALDAGALGYVTKASAPDVLVEAVRTIARR 125 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Y++ DI+Q +AL E P LS RE +++ ++ +G + I+E+L LS KTV Sbjct: 126 AGYLSPDISQALALRNAFSEG--PPGRQLSAREFEVLRLLVQGYTLPSIAEKLGLSQKTV 183 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 +++ + K V+L +A R GL Sbjct: 184 ANHQSVIRQKFGADNGVQLAQMASRLGL 211 >UniRef50_UPI00018507A5 two component LuxR family transcriptional regulator n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI00018507A5 Length = 212 Score = 262 bits (670), Expect = 8e-69, Method: Composition-based stats. Identities = 70/203 (34%), Positives = 117/203 (57%), Gaps = 5/203 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+ DDH L R G+ +L + +V+ EA GE+AV+ D+VLMD+ MP + Sbjct: 4 IRVLIADDHPLFRQGVSSVLANTPDNEVIAEAGSGEEAVQMACNLLPDLVLMDIQMPDLN 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATRKI D+ II++T+ ++ MQAGA GY+ K A ++++ A+R++ G Sbjct: 64 GIEATRKILSKCRDIYIIIITMFEDDTSVFSAMQAGARGYVLKDAEKEDILRAVRAIAKG 123 Query: 122 QRYIASDIAQQMALSQIEPEKTE-----SPFASLSERELQIMLMITKGQKVNEISEQLNL 176 + +S +A +M + E T+ + F L+ RE +++ +++KG +E++E L L Sbjct: 124 EVLFSSGVASRMIDYFAQGEVTQTVVASTLFPELTSRESEVLFLLSKGASNSEVAETLGL 183 Query: 177 SPKTVNSYRYRMFSKLNIHGDVE 199 S KTV +Y + +KL + E Sbjct: 184 SNKTVYNYVANILNKLQVSDRQE 206 >UniRef50_A5URU4 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexi (class) RepID=A5URU4_ROSS1 Length = 242 Score = 262 bits (670), Expect = 8e-69, Method: Composition-based stats. Identities = 75/220 (34%), Positives = 124/220 (56%), Gaps = 11/220 (5%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL++DDH L R GIR LE+ ++VVGEA G++A+K DVVL+D+++PG+ Sbjct: 5 IRVLIIDDHPLFRQGIRWSLEEAGDMEVVGEAENGQEAIKLAERLVPDVVLVDINLPGLN 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLE R I R + +I+++V+ ++ + ++ GAA Y SK P+++V IR V G Sbjct: 65 GLEVARVIKRREPRIGLIVISVYEDDDQLFQAIKVGAAAYSSKDVHPRDLVRMIREVARG 124 Query: 122 QRYIA------SDIAQQMA-----LSQIEPEKTESPFASLSERELQIMLMITKGQKVNEI 170 + I +A ++ L+ E E+T + FA L+ RE++I+ I +G EI Sbjct: 125 KYLINDSVIAKPHVATRVLHQFRELAATEDERTSALFAPLTSREIEILDCIARGLSNKEI 184 Query: 171 SEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 + QL++S +TV ++ + SKL ++ AI+ G Sbjct: 185 ASQLSISGQTVKNHITSILSKLQVNDRTMAVIYAIQRGWI 224 >UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1Z2_9FIRM Length = 209 Score = 262 bits (670), Expect = 9e-69, Method: Composition-based stats. Identities = 76/209 (36%), Positives = 125/209 (59%), Gaps = 2/209 (0%) Query: 5 LLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGLE 64 ++VDDH L+RAGI+ +L++ V EA GE+A++ +D+V+MD+SMPG+GGL Sbjct: 1 MIVDDHLLIRAGIKLLLKNTSAYTVTAEAESGEEALRLLAQQPIDLVIMDISMPGMGGLA 60 Query: 65 ATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQRY 124 R+I VKI++L++H + K MQ GA GYL K +A E+ A++ + G+RY Sbjct: 61 CIREIRAHYPAVKILVLSMHEDEEYIYKAMQYGAMGYLPKTSADNELFDALQVLSQGRRY 120 Query: 125 IASDIAQQMALSQIEP--EKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVN 182 ++ + Q + P E + P + L+ RE ++ + G + EI+EQL+LS KTV+ Sbjct: 121 LSPNAQQSLMDIMFRPAEEAADDPRSVLTAREREVFDELIHGYTITEIAEQLHLSVKTVD 180 Query: 183 SYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 +++ ++ KL+ EL LA+R+GL Sbjct: 181 THKKHIYEKLHCSRRSELVTLALRNGLLQ 209 >UniRef50_C1RMQ2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Actinomycetales RepID=C1RMQ2_9CELL Length = 254 Score = 262 bits (670), Expect = 9e-69, Method: Composition-based stats. Identities = 67/214 (31%), Positives = 111/214 (51%), Gaps = 5/214 (2%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 VL+VDD L+R GIR +L G++VVGEA G AV+ R DV LMD+ MPG+ G Sbjct: 11 TVLVVDDQPLIRQGIRAVLRGQPGVEVVGEAHDGHSAVRTARRLRPDVTLMDVQMPGMDG 70 Query: 63 LEATRKIAR-STADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 +EATR I +++LT++ ++ + ++AGA G + K A E+V+AI + +G Sbjct: 71 VEATRVICADDDPPTSVVVLTMYDQDEHVFEALRAGARGLVLKDAPTSELVAAIHAAAAG 130 Query: 122 QRYIASDIAQQMALSQIEPE----KTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 ++ + +++ + A L+ RE + ++ +G E +E+L L Sbjct: 131 DSLLSPSVTRRLIEEFARRPTVRMEATDGPAELTARERDVFRLLVQGLSTAEAAERLTLG 190 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 TV S+ ++ KL + V+ A HGL + Sbjct: 191 DSTVKSHVQSLYRKLGVRDRVQAVIYAYEHGLVD 224 >UniRef50_C6WV69 Two component transcriptional regulator, LuxR family n=2 Tax=Betaproteobacteria RepID=C6WV69_METML Length = 216 Score = 262 bits (670), Expect = 9e-69, Method: Composition-based stats. Identities = 78/210 (37%), Positives = 136/210 (64%), Gaps = 1/210 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V++ DDH ++RAG+++IL + + I V+ EA +A+K DV+L+D+S+P Sbjct: 8 IKVIIADDHAILRAGLKQILSETEDILVIAEAQNANEAIKLGSQPEADVLLLDISLPDRS 67 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA + I R + + ++ML++H E+ + +++GAAGYL K +A E+V+AI++V G Sbjct: 68 GMEALKYIKRENSHIAVLMLSMHREDEYAIRALKSGAAGYLCKQSASSELVNAIQTVARG 127 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 ++YI ++A+ +A +QI + ++P LS+RE Q +MI G V +++ +L+LS KTV Sbjct: 128 KKYITPEVAEILA-NQIGRDDQKAPHELLSDREYQTFIMIASGLSVTDVANKLSLSVKTV 186 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 + YR R+ K+ + + ELTH A +H L + Sbjct: 187 SMYRARLLEKMQLKHNAELTHYAFKHNLVS 216 >UniRef50_A1SKW0 Two component transcriptional regulator, LuxR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SKW0_NOCSJ Length = 215 Score = 262 bits (670), Expect = 9e-69, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 114/210 (54%), Gaps = 6/210 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+VDDH L R G RRILE + VVG+A+ GEDA+ VVLMD+ +PG+ Sbjct: 6 IAVLVVDDHTLHRDGTRRILEQYDDVDVVGDAASGEDALAMVNRLHPRVVLMDIRLPGMN 65 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR+I D +++++T + + GAAGYLSK A +E+V A+R+V G Sbjct: 66 GIEATRRIRERHPDTRVLIVTAYDDEEYVRGAFDVGAAGYLSKTAPGRELVEAVRAVAGG 125 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + + + K SP +L++RE ++ ++ +G +I+ +L +S +TV Sbjct: 126 NSVLQPTLMAALL------AKRSSPANTLTDRERAVLRLLAEGMHNKQIASRLGISARTV 179 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 + R++ KL + E AI L + Sbjct: 180 ERHCDRIYGKLGVTSRTEAVVRAISANLLD 209 >UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N7Q7_9GAMM Length = 226 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 74/217 (34%), Positives = 129/217 (59%), Gaps = 2/217 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I ++LVDDH +VR G R +L+ ++V+ EA G +A + D+V+MD+S+PG Sbjct: 5 ITIMLVDDHAIVREGYRSLLQKQDNLEVIAEACDGTEAYSQYKKYQPDIVVMDISLPGQS 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GL+A +I + A KI++ ++H + +AGA GY++K + P++++ AI V Sbjct: 65 GLKAIERIRQFDAKAKILVFSMHQNPSFALQATRAGALGYITKSSDPEDLIRAIAEVAKN 124 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + +++DIAQ +A+ ++ E +S L+ RE +I+ ++ + +I+E LN+SPKTV Sbjct: 125 KHTLSADIAQALAMEKLGQE--QSALDELTVREFEILRLLVDAKSNQDIAELLNISPKTV 182 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLSSQ 218 ++ Y + KL + D+ELT LAI+ L N L + Sbjct: 183 SNSHYIIKKKLGVSSDIELTRLAIKMNLVNLLDLVDE 219 >UniRef50_C5C7H0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=9 Tax=Bacteria RepID=C5C7H0_MICLC Length = 230 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 70/221 (31%), Positives = 121/221 (54%), Gaps = 11/221 (4%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + V LVDD L+R+G+ +++ + VV EA G +AV DVVLMD+ MP + Sbjct: 9 VRVALVDDQALIRSGLAMLVDSQPDLTVVAEAGSGREAVASVSVAGADVVLMDVRMPEMD 68 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR + R ++++LT + ++AGA+G+L K A P+E+++AIR+V+ G Sbjct: 69 GIEATRALLRRPDAPRVVVLTTFDLDEYAFDAIEAGASGFLLKDAPPEELLAAIRTVHRG 128 Query: 122 QRYIASDIAQQMA-----------LSQIEPEKTESPFASLSERELQIMLMITKGQKVNEI 170 IA +++ + E E+ ++ ASL+ RE ++++++ +G EI Sbjct: 129 DAVIAPSTTRRLLTHMAPRLRSDQVRSAECEEQQAAVASLTPREREVLVLMAQGAANLEI 188 Query: 171 SEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 + +L LS TV ++ R+ +KL V+ +A R GL Sbjct: 189 AAELVLSEATVKTHVGRVLAKLGARDRVQAVLIAHRAGLVQ 229 >UniRef50_D1BX47 Two component transcriptional regulator, LuxR family n=14 Tax=Actinomycetales RepID=D1BX47_XYLCX Length = 234 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 64/223 (28%), Positives = 120/223 (53%), Gaps = 12/223 (5%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTN--AVDVVLMDMSMPG 59 I V LVDD ++VRAG R +++ + VV EA G +A++ DVVLMD+ MP Sbjct: 10 IRVALVDDQQMVRAGFRMVIDSQPDMTVVAEAGDGVEALRVLGALPVRADVVLMDVRMPR 69 Query: 60 IGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVY 119 + GL AT + ++++LT + + +++GA+G++ K A P+E++ AIR+V+ Sbjct: 70 MDGLTATAALTSGADAPRVVVLTTFDIDEYVLEAIRSGASGFMLKDAPPEEMLGAIRTVH 129 Query: 120 SGQRYIASDIAQQMALSQIEPEKTESP----------FASLSERELQIMLMITKGQKVNE 169 +G IA +++ + T +P A+L++RE +++ ++ +G+ E Sbjct: 130 AGDAVIAPSSTRRLLEHLVTALPTPAPDTPPSPAHAALATLTDREREVLELMARGRSNTE 189 Query: 170 ISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 I+ L ++ TV ++ R+ +KL+ V+ LA G+ + Sbjct: 190 IAADLFVAEATVKTHVGRILAKLDARDRVQAVVLAYETGVVHP 232 >UniRef50_B1KE04 Two component transcriptional regulator, LuxR family n=2 Tax=Alteromonadales RepID=B1KE04_SHEWM Length = 206 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 59/208 (28%), Positives = 109/208 (52%), Gaps = 4/208 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + + +VDDH + R G+ L +VG+A+ G++A++ D+VLMD+SMP + Sbjct: 1 MRIFIVDDHPIFREGLIARLSMDDDFVIVGQAANGKEALEKMPNLMPDIVLMDISMPEMN 60 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++A ++KI++L++H + V+ G GY K + E+ A+R +++G Sbjct: 61 GMDAAEIFKDKFPEIKILILSMHDDKEYVLSVLNRGVRGYALKDISAAEMFYALRVIHNG 120 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Y + I+ + S EP+K L+ RE ++ ++ G E++ +L++S +T+ Sbjct: 121 GIYYSRAISDLLVQSSQEPDKN----TVLTTREQTVLRLLASGLNNKELARELDISVRTI 176 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 ++R + KL I L AI HGL Sbjct: 177 ETHRRNIKDKLAIKTSAGLVRYAIDHGL 204 >UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding domain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746AEC Length = 222 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 113/207 (54%), Gaps = 2/207 (0%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 VLLVDDH +V G R +L ++V A +A+ D+V+ D+++ G G Sbjct: 11 RVLLVDDHRMVLEGYRFMLNAQPDLEVCATAVSAAEALGLLEQVRPDLVVTDLTLGGRSG 70 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 L+ + + + KI++ ++H E + +QAGA GY+ K A ++A+R+V +GQ Sbjct: 71 LDLIKDVMALFPETKILVCSMHDEMLWANRTLQAGARGYVMKDADGPTFLTAVRTVLAGQ 130 Query: 123 RYIASDIAQQMA--LSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 RY++S +A + Q +P + SP LS+RE ++ + +G+ EI+ QLNLSPKT Sbjct: 131 RYMSSRLAASVLESFGQSKPRGSSSPIEKLSDREFEVFRLFGEGKTAKEIAAQLNLSPKT 190 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRH 207 V+ +R + KL E+ A+RH Sbjct: 191 VSVHRDHIKEKLGFSTSAEMIRQAVRH 217 >UniRef50_Q5NZZ3 Two-component system response regulator n=3 Tax=Betaproteobacteria RepID=Q5NZZ3_AZOSE Length = 210 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 76/211 (36%), Positives = 127/211 (60%), Gaps = 1/211 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +L+VDDH + R+G+RR+L D + V EAS G A+ R+ DV+LMD++M G Sbjct: 1 MIELLIVDDHTIFRSGLRRMLSDEADMHVADEASDGASALAKIRSGKFDVILMDINMAGR 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GL+ + ++ +IML+++ E ++A A YLSK PQE+++AIR V Sbjct: 61 SGLDTLESLRAERPELPVIMLSMYPEEQYAVLALRARANAYLSKDVEPQELLAAIRHVVG 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G RY++ A + + Q++ + +P L+ RE+Q+M+ I +G + ++ Q+ LS KT Sbjct: 121 GGRYVSPRSAANLLM-QMDRAREGAPHEKLTAREMQVMMKIVRGMSLTDVGVQMCLSVKT 179 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V++YR R+ KL++ + EL A+R+GL + Sbjct: 180 VSTYRMRILEKLSLSSNAELVQYAMRNGLLD 210 >UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR family n=89 Tax=Bacteria RepID=C7Q6M6_CATAD Length = 225 Score = 260 bits (666), Expect = 3e-68, Method: Composition-based stats. Identities = 64/214 (29%), Positives = 119/214 (55%), Gaps = 1/214 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+ DDH +VR G+R LE +GI+V GEA+ G + + DV+L+D+ MPG+ Sbjct: 8 IRVLIADDHRMVRQGLRTFLELQEGIEVAGEAADGAECAERAAELEPDVILLDLVMPGVD 67 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ A + + + +++++T T+ + ++AGA GY+ K P + +A+RSV++G Sbjct: 68 GVGAMELLREAGSTARVLVVTSFTDRRMIIPAIRAGARGYVYKDVDPAALAAAVRSVHAG 127 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFA-SLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 + ++A + S + P A +L+ RE +++++I +G+ EI+ L L+ KT Sbjct: 128 HVLLEPEVATALLDSGSNGAADQGPQAPALTAREREVLVLIAQGRANREIARALVLAEKT 187 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 V ++ + KL + + A+RHG+ + Sbjct: 188 VKTHVSNILMKLGVADRTQAALWAVRHGIAPEDQ 221 >UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M4_MAGSA Length = 209 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 126/210 (60%), Gaps = 3/210 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +L+ +D +LVR G+ +L + + +VGEA G+ A++ RT A DVVLMD+SMP + Sbjct: 3 VRILIAEDQQLVRQGLVALL-AVDDVTIVGEAEDGKGAIEMARTLAPDVVLMDLSMPELD 61 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR+I + V++++LTV A+ + AGA GY K E+++AI +V +G Sbjct: 62 GVEATRRIKQVAPQVRVLVLTVANCERRVAEALAAGADGYALKKLGHGELMAAINAVCAG 121 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + Y+ +++ + +E SL+ RE +++ +I +G K EI+++L ++ KTV Sbjct: 122 KTYLGPGLSEDLVKEYLEGSDMGGG--SLTAREREVLQLIARGHKNREIADELGIAIKTV 179 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++R ++ KL++H EL AIR GL Sbjct: 180 ETHRTKIMQKLDLHNSAELAAYAIRRGLIE 209 >UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID=Q9RPE7_CORDI Length = 233 Score = 260 bits (665), Expect = 4e-68, Method: Composition-based stats. Identities = 72/230 (31%), Positives = 114/230 (49%), Gaps = 12/230 (5%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI V LVDD +LVRAG R +L+ I V EA+ G++A++ VDV+LMD+ MP + Sbjct: 1 MITVGLVDDQQLVRAGFRMVLDSQSDITVAWEANDGKEALENAANTPVDVILMDVQMPVM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GLEAT++I + D +II+LT ++ GA+G+L K AP+++++A+R+V Sbjct: 61 DGLEATKRIVATNTDTRIIVLTTFDSENYVVGAVEHGASGFLLKDTAPEDLIAAVRTVGE 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTES------------PFASLSERELQIMLMITKGQKVN 168 I+ + S L+ RE +I+L+I G+ Sbjct: 121 QSAVISPAATAVLFKSMRGHAPQTDLVATPGGDINAGLIDPLTPREQEILLLIALGKSNT 180 Query: 169 EISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLSSQ 218 EI+E+L +S TV ++ ++ SK V A GL L + Sbjct: 181 EIAEELFISLPTVKTHVSKVLSKTGSRDRVHAVLFAFSRGLVAPNQLLTH 230 >UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9H4_DESAH Length = 217 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 64/213 (30%), Positives = 121/213 (56%), Gaps = 2/213 (0%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 V++ DDH ++R GI +++E +G+ VVGE G + + T D+V++D+SMP + G Sbjct: 5 RVVIADDHAMLRRGICQVIETQEGVSVVGEVGDGIELLNLLSTQPADLVILDISMPKMSG 64 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 +EA +KI + +KI+ L++H N AGA GYL K E+++A+ ++ G+ Sbjct: 65 IEAAKKIRATYPGIKILFLSMHKRNEYLYHAFSAGANGYLLKEDTDTEILTAMDTILEGK 124 Query: 123 RYIASDIAQQM--ALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 +++S + M L+ + + P +LS RE +++ ++ +G+ +I++ L +S +T Sbjct: 125 AFLSSIFTKDMPDILTDMVKNGSSFPGGTLSPREEEVLTLLAEGKSNKKIADILCISTRT 184 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 V +R + +L++ +L AIRHG + E Sbjct: 185 VEHHRASIMKRLDLRTLADLIKYAIRHGYTSDE 217 >UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmicutes RepID=VRAR_STAA1 Length = 209 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 110/210 (52%), Gaps = 3/210 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL VDDHE+VR GI L I+VVGE + G++A+ D++LMD+ M + Sbjct: 3 IKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKPDLILMDLLMEDMD 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EAT +I + +K++MLT E+ + + AG Y+ K + +++ A+R G Sbjct: 63 GVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTSRG 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + ++ + + +K + L+ERE++I+L+I KG EI+ +++ KTV Sbjct: 123 ESVFEPEV---LVKMRNRMKKRAELYEMLTEREMEILLLIAKGYSNQEIASASHITIKTV 179 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++ + SKL + + A +H L Sbjct: 180 KTHVSNILSKLEVQDRTQAVIYAFQHNLIQ 209 >UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYF0_9SPHI Length = 218 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 66/215 (30%), Positives = 111/215 (51%), Gaps = 5/215 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + V + DDH L R G+ ILE I+VV A G++ + DV+LMD+ MP + Sbjct: 3 VKVAIADDHVLFRKGLVTILELDDNIEVVYGADNGKELIDKVDAQPPDVILMDLKMPVMD 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EAT+ I +VK+++L+++ E ++ GA GYL K P E+V AI +V + Sbjct: 63 GMEATKIIKAKYPEVKVLVLSMYDEEKFIIHCLELGANGYLLKNTDPDELVHAIGTVMAK 122 Query: 122 QRYIASDIAQQMA--LSQIEPEKTESPFA---SLSERELQIMLMITKGQKVNEISEQLNL 176 Y + I+ M L+Q + K + F L++RE +++ +I K E++E+L + Sbjct: 123 DFYFNNHISTVMLKGLNQKKRAKGKPQFENSIELTKREQEVLELICKELTTPEMAEKLFI 182 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 S +TV +R + K L A+++ L Sbjct: 183 SNRTVEGHRKNLLEKTGAKNTAGLVVFALKNELVE 217 >UniRef50_A9AZR3 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AZR3_HERA2 Length = 213 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 69/208 (33%), Positives = 114/208 (54%), Gaps = 3/208 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 +I ++LVDDH +VR G+R +L + +VGEA G DA++ V+LMD+ MP + Sbjct: 4 IIRIMLVDDHAIVREGLRTLLAEDTEFLIVGEAQNGADAIELAAVVRPHVILMDLVMPNV 63 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G++AT+ + +II+LT +++ +K +QAGA+GYL K E+ AIR+V + Sbjct: 64 DGIQATQALQSLMPSSRIIVLTSFSDDQWVSKAIQAGASGYLLKNVLKAELFLAIRTVAN 123 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 GQ ++ ++ + + P S SL+ERE ++ I G EI+ L+L+ T Sbjct: 124 GQPFLHAEAQRTLMRQSTAP---PSLLPSLTERERSVLDGIVGGLSNKEIARSLHLTEGT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHG 208 V Y + +KL + + AI+HG Sbjct: 181 VKGYVSTILTKLAVADRTQAALYAIKHG 208 >UniRef50_D2Q2Q8 Two component transcriptional regulator, LuxR family n=3 Tax=Actinomycetales RepID=D2Q2Q8_9ACTO Length = 216 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 80/216 (37%), Positives = 120/216 (55%), Gaps = 5/216 (2%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VL+VDD +LVRAG+R ++++ ++VVGEAS G +A+ R + DVVLMD+ MP + Sbjct: 1 MIRVLVVDDQDLVRAGLRLLIDNTDDLRVVGEASDGREALALAREHQPDVVLMDLQMPVM 60 Query: 61 GGLEATRKIARS--TADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSV 118 GG+E T I D +++LT + +QAGA+GYL K A E+ AIR+ Sbjct: 61 GGVETTAAIRADPLLKDTPVVVLTTFDHDADVVDAVQAGASGYLLKDLAADELRGAIRTA 120 Query: 119 YSGQRYIASDIAQQM---ALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLN 175 +G IA +A+ M + E A L+ REL I+ + +G EI + L Sbjct: 121 VTGGAPIAPKVAKLMMHRISRMPSRKVQEETLAGLTARELDILAHVGRGLSNEEIGQALF 180 Query: 176 LSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 LSP+T +Y R+ +KL + +L LA + GL + Sbjct: 181 LSPETARTYVSRLLAKLGVRDRSQLVVLAHKAGLVD 216 >UniRef50_C7QC31 Two component transcriptional regulator, LuxR family n=95 Tax=Actinobacteria (class) RepID=C7QC31_CATAD Length = 236 Score = 259 bits (664), Expect = 5e-68, Method: Composition-based stats. Identities = 77/217 (35%), Positives = 124/217 (57%), Gaps = 7/217 (3%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 V+L DD +LVRAG+R +++ G+ VVGEA+ G DAV+ R DVVLMD+ MPG+ G Sbjct: 15 RVVLADDQDLVRAGLRLMIDRAPGLAVVGEAATGHDAVRIAREARADVVLMDIRMPGLDG 74 Query: 63 LEATRKIARSTA--DVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 L ATR+IA + V++++LT + + +++GA+G+L KGA P ++ AIR+V Sbjct: 75 LAATRRIAADDSLAGVRVLILTTFEVDDYVFEALRSGASGFLGKGARPDALIDAIRTVAR 134 Query: 121 GQRYIASD-----IAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLN 175 G ++ IA+ ++L EP +L++RE ++ ++ G +I+ QL Sbjct: 135 GDALLSPSATRGLIARFLSLQDTEPVHPSPLLTTLTDRERELTALVADGMSNTDIARQLT 194 Query: 176 LSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 LSP TV ++ +KL +L LA + GL + Sbjct: 195 LSPLTVKTHVNHAMTKLGARDRAQLVVLAYQTGLAHP 231 >UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC-HTH domains) n=7 Tax=Bacteria RepID=B3DW63_METI4 Length = 243 Score = 259 bits (663), Expect = 5e-68, Method: Composition-based stats. Identities = 69/205 (33%), Positives = 117/205 (57%), Gaps = 2/205 (0%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 VL+VDDH ++R G+ +++ G+ V G A + + DVVL+D+S+PG G Sbjct: 20 KVLIVDDHAILREGLIQLINSTPGLSVCGAAKNAHEGFELIEKTMPDVVLVDISLPGKSG 79 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 LE + I + D+ +++L++H E+ +V++AGA GYL K Q++++AI+ V +G Sbjct: 80 LELIKDIHAAYPDIALLVLSMHEESLYAERVLRAGARGYLMKNEGGQKLIAAIQKVLAGG 139 Query: 123 RYIASDIAQQMALSQIEPEKTE--SPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 ++ +A ++ K SP +LS+RE ++ +I KG +I+EQL+LS KT Sbjct: 140 ISVSERVANRILQGVSGKRKALSISPIEALSDREFEVFQLIGKGYGSRQIAEQLSLSVKT 199 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAI 205 V +YR + KL + +L H AI Sbjct: 200 VEAYRASIKQKLYLKSGPQLVHYAI 224 >UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=Mesorhizobium loti RepID=Q98DH9_RHILO Length = 215 Score = 259 bits (663), Expect = 5e-68, Method: Composition-based stats. Identities = 69/209 (33%), Positives = 124/209 (59%), Gaps = 1/209 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +++ DDH +VR+GIR +LE V GEA GE AV+ R +A +V++D S+P + Sbjct: 6 IKIVIADDHPIVRSGIRAVLEQRAEWWVCGEADNGETAVRLAREHAAKIVILDYSLPVLN 65 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLEATR I R+ + ++++ T+H + L + ++AGA GYL K E+V+A+ ++ G Sbjct: 66 GLEATRIIRRTMPETEVLIYTMHEDESLIRETLRAGARGYLLKIEDDSELVAAVAALIRG 125 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Q Y + +++ + ++ + + +L+ RE +++ +++G+ I+ +L +S KTV Sbjct: 126 QTYFSPRVSECVLQDFLDGQSDVTS-RNLTNREREVVRFVSEGESNKRIAARLGVSVKTV 184 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 +S+R KL + V+L AIR+ L Sbjct: 185 DSHRTTAMRKLGLRNAVDLVRYAIRNKLT 213 >UniRef50_Q2BNR9 DNA-binding response regulator, LuxR family protein n=2 Tax=Neptuniibacter caesariensis RepID=Q2BNR9_9GAMM Length = 214 Score = 259 bits (663), Expect = 6e-68, Method: Composition-based stats. Identities = 79/213 (37%), Positives = 133/213 (62%), Gaps = 2/213 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +++ DDH +VR G +L + V EA G+ A C++++ DVV+MD++M GI Sbjct: 1 MKIVIADDHAVVRQGYASLLSAMLAPCEVLEAGNGDQAYSLCQSDSPDVVIMDVNMQGIS 60 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR+I + D +I+ +++ E P+ + ++AGA GY++K P+ ++ A++ V +G Sbjct: 61 GIEATRRILQKKPDTRILFFSMYDEIPVVTQALEAGAKGYITKSCTPEILIEAVKKVSAG 120 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Q Y+ ++A ++A+S PE+ + +++RE +I +M+ +G V EISEQL +S KTV Sbjct: 121 QLYVEHELAMRLAVS--RPEQKDKRLKEMTQREFEIFVMLAQGSNVKEISEQLCISSKTV 178 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 ++Y + SKLNI EL HLAI GL T Sbjct: 179 SNYTAILKSKLNIGSTAELVHLAIETGLVKVGT 211 >UniRef50_C4XMF2 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMF2_DESMR Length = 218 Score = 259 bits (663), Expect = 6e-68, Method: Composition-based stats. Identities = 61/214 (28%), Positives = 117/214 (54%), Gaps = 5/214 (2%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 +L+VDDH L R G++ IL V GEA +A++ + D+ ++D+S+P G Sbjct: 5 RLLIVDDHPLFREGLKAILRRDPSYAVAGEAGSYAEALRTAKDCRPDLAVLDISLPDRSG 64 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 ++ R++ + + I+M+++H + A+ ++ GA GYL+K AA ++S +R+V +GQ Sbjct: 65 IQLARELRQMLPSLGILMVSMHAKVDYVAEALKVGALGYLTKDAATDNLLSGLRAVAAGQ 124 Query: 123 RYIASDIA-----QQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 ++ ++ +A + E++ S + SL+ RE ++M ++ +G E++ L +S Sbjct: 125 PWLDPTLSVEISRSLLAKTPRAEEESHSAYDSLTPREREVMRLVVEGLSNKEVAAALEIS 184 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 KT +R + KL + VEL A + GL + Sbjct: 185 VKTAEHHRGSLMRKLGMQNSVELVRYATKLGLID 218 >UniRef50_D1BGN7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=4 Tax=Actinomycetales RepID=D1BGN7_SANKS Length = 258 Score = 259 bits (663), Expect = 6e-68, Method: Composition-based stats. Identities = 72/218 (33%), Positives = 118/218 (54%), Gaps = 7/218 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLLVDD EL R+GI I++ G++VVG+A+ G +AV+ + DVVLMD+ MP + Sbjct: 34 IRVLLVDDQELFRSGIAVIVDAQDGLEVVGQAADGSEAVRMVDDLSPDVVLMDVRMPELD 93 Query: 62 GLEATRKI------ARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAI 115 G+EATR+I A V++I+LT + A ++ GA+G+L K A P + AI Sbjct: 94 GVEATRQIFAPARAASRAGPVRVIVLTTFDLDDRAAAAIRYGASGFLLKDATPAMLRDAI 153 Query: 116 RSVYSGQRYIASDIAQQMALSQIEPEKTESP-FASLSERELQIMLMITKGQKVNEISEQL 174 R+V++G +A D + + + P L+ +E +++ + G EI+ + Sbjct: 154 RTVHAGNAVLAPDDLSTLLDGRFRARRPSPPGLEDLTPKEREVLAAVAAGLNNAEIARRA 213 Query: 175 NLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 +S TV ++ + KL + V++ LA HGL + Sbjct: 214 FVSESTVKTHVGAVLRKLGLRDRVQVVVLAHEHGLVDP 251 >UniRef50_C5VAN3 Two component transcriptional regulator, LuxR family n=2 Tax=Corynebacterium matruchotii RepID=C5VAN3_9CORY Length = 215 Score = 258 bits (662), Expect = 7e-68, Method: Composition-based stats. Identities = 66/212 (31%), Positives = 110/212 (51%), Gaps = 1/212 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 +I V++ DD L+RAG+ IL+ I+V+GEAS GE+A+ + DVV MD+ MPG Sbjct: 4 LIRVVIADDEALIRAGLATILQASGDIEVIGEASTGEEALTVAQRLQPDVVCMDIRMPGG 63 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GLEATR+I + +I++T + ++AGA G L K ++ ++V +R Sbjct: 64 DGLEATRRIQQLEPAPAVIVITTFDMDEYVFGALEAGACGILLKDSSMTDLVEGVRRAAL 123 Query: 121 GQRYIASDIAQQMALSQIEPEKT-ESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 G+ + + + +++ + S L+ REL + + +G NEI+ L L P Sbjct: 124 GEGLVDASLTRRVIAEFTRRKSIFTSSSEVLTPRELDCVAQLCQGMSNNEIATTLFLEPS 183 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 TV ++ +K H V+L A R+G+ Sbjct: 184 TVKTHLSSAMAKTGTHNRVQLVIWAFRNGVVE 215 >UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrhizobium RepID=Q89IF1_BRAJA Length = 217 Score = 258 bits (662), Expect = 8e-68, Method: Composition-based stats. Identities = 85/210 (40%), Positives = 119/210 (56%), Gaps = 2/210 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I+VLLVDDH +VR G RR+LE + VV EA DA + + DVV++D+SMPG Sbjct: 9 ISVLLVDDHPIVRQGYRRVLESQGDLHVVAEADNAADAYGAFKAHDPDVVVLDISMPGAS 68 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLEA R I + +I++ T+H E L AGA+G+++K + P VV+AIRSV G Sbjct: 69 GLEAIRNIRARSPRARILVFTMHNEAVLVKAAFSAGASGFVTKSSEPSAVVNAIRSVARG 128 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 +R ++ DIA +A + P T S L ERE++I+ G +I+ LNLS KTV Sbjct: 129 ERAMSDDIAHILADDSLSP--TGSVLDQLGEREIEILRQFAGGATTEQIATHLNLSVKTV 186 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 +Y Y + +K D +L LA GL Sbjct: 187 QNYHYLIKTKTGARTDAQLVRLAASCGLTK 216 >UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexaceae RepID=A9WKI8_CHLAA Length = 209 Score = 258 bits (661), Expect = 8e-68, Method: Composition-based stats. Identities = 68/211 (32%), Positives = 118/211 (55%), Gaps = 6/211 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPG-I 60 I V LVDDH +VR G+ L I VVGEA+ GE A++ T DV++MD+ MPG I Sbjct: 4 IRVALVDDHSIVRRGLSAYLAAQPDIVVVGEAANGESALQMASTWQADVIVMDVLMPGGI 63 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+E TR++ R II+L+ + ++ ++AGA Y+ K + P++++ AIR + Sbjct: 64 DGIETTRQLKRLIPHTHIIILSGYADDARVIGALRAGAITYIEKESQPEQLLEAIRGAMA 123 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+ +A + Q++ +Q +L+ERE +++ ++ +G EI+ +L +S +T Sbjct: 124 GKAVLAPALMQRILEAQTSKAA-----DTLTEREREVLKLVAEGLTNAEIASRLTVSEET 178 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V ++ + KL + + A+RHGL + Sbjct: 179 VKTHVASILRKLGLAHRTQAAIYALRHGLVS 209 >UniRef50_UPI0001C314AF two component transcriptional regulator, LuxR family n=2 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314AF Length = 228 Score = 258 bits (661), Expect = 8e-68, Method: Composition-based stats. Identities = 66/211 (31%), Positives = 113/211 (53%), Gaps = 4/211 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V++ DDH +VR+G+R +L+ I VV EA A + R + V+++D++MPG Sbjct: 14 IRVVIADDHRVVRSGLRMVLDAEPDIAVVAEAGDVPSAERAVRAHHPHVLVLDLNMPGEQ 73 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 L A ++ + +++LT+ + + +++GA GY+ K AA E+V A+R G Sbjct: 74 SLPAIPRLVAELPETAVVVLTMQQDPAFAREALRSGARGYVLKEAADDELVQAVRLAREG 133 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + Y+ ++ +MA P L+ REL+++ +I G EI++QL LS +TV Sbjct: 134 RTYLNPELGARMAAE----PPPSGPPDDLTARELEVLRLIALGHTNAEIAQQLFLSIRTV 189 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 S+R + K+ EL A+ HGL +A Sbjct: 190 ESHRAHIQQKVRRSSRAELVRYALDHGLMDA 220 >UniRef50_UPI0001789C57 two component transcriptional regulator, LuxR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C57 Length = 225 Score = 258 bits (661), Expect = 9e-68, Method: Composition-based stats. Identities = 70/220 (31%), Positives = 119/220 (54%), Gaps = 9/220 (4%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI ++L DD +R G+R IL+ K ++V+GEA GE+AV N D+VLMD+ MPG Sbjct: 6 MIRIVLADDQPFIRKGLRYILDIQKDMQVIGEAMTGEEAVDITLRNVPDIVLMDIRMPGG 65 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+ AT+ IA + + K+++LT ++AGA+GYL K E++S IR+++ Sbjct: 66 TGIMATKSIAEALPNTKVVLLTTFDVEQYVFDGIRAGASGYLLKDTETDELLSGIRAMHR 125 Query: 121 GQRYIASDIAQQ----MALSQIEPEKTESP-----FASLSERELQIMLMITKGQKVNEIS 171 G S A++ + S ++ ++SP +L+ERE +++ ++ G++ +EIS Sbjct: 126 GATLFNSSTAKRALDQILTSGMQEPDSDSPGKDRLLGALTERETEVLQLLAYGKRNHEIS 185 Query: 172 EQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 L +S T ++ + + KL + AIR L Sbjct: 186 AILCISEGTTKTHIHHIMQKLGALDRTQAVVTAIRMKLVK 225 >UniRef50_C5UZV9 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZV9_9PROT Length = 213 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 78/213 (36%), Positives = 133/213 (62%), Gaps = 1/213 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +L+VDDH L+R G++++LED +K+ GEAS G +A+ R D++L+D+++P Sbjct: 1 MIQILVVDDHALIRKGLKQLLEDTPDLKITGEASSGTEAISMLRAAPFDLMLLDINLPDK 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+E ++ +KII+L+++ E+ + ++AGA GY++K +A ++ AIR V S Sbjct: 61 HGIEVLKQFKSEQPQLKIIILSMYPEDQYGVRALKAGAMGYINKQSASDVLIKAIRHVLS 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G++YI+ +A+Q+ + I E E +LS RE Q + ++ G+ ++EIS+ + LSPKT Sbjct: 121 GKKYISEILAEQLLNNLI-GESQELMHQNLSNREYQTLCLMASGKTLSEISQIMALSPKT 179 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 V+ YR RM +K+ + E H AI H L + Sbjct: 180 VSVYRSRMLAKMTFTNNAEAIHYAITHRLVELQ 212 >UniRef50_A4FAA4 Two component system response regulator n=2 Tax=Actinomycetales RepID=A4FAA4_SACEN Length = 218 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 69/216 (31%), Positives = 117/216 (54%), Gaps = 5/216 (2%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 M +LL +D ++VRAG+R+ILE + V+ EA G +AV R +A DVV+MD+ MP + Sbjct: 1 MTRILLAEDEQIVRAGLRKILESAGDLTVIAEAGDGAEAVTGVRRHAPDVVVMDIQMPRL 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GL ATR+I A KI++LT+ + ++AGA+G+L K A P+E+++AIR + Sbjct: 61 DGLAATRQITSLPAPPKILILTMFDFDANVYSAIEAGASGFLLKDARPEELINAIRVIAD 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESP-----FASLSERELQIMLMITKGQKVNEISEQLN 175 G ++ + +++ + P L+ RE QI+ ++ G I++ L Sbjct: 121 GDAMLSPSVTRRLLSHFADRNSPRGPTAVRGLDELTPRERQILSLVGGGLSNASIAKTLG 180 Query: 176 LSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 + TV + R+ KL+ V+L +A G+ + Sbjct: 181 ATESTVKGHVSRLLMKLDCENRVQLALIAHNAGIAS 216 >UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus RepID=A9WA66_CHLAA Length = 218 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 71/214 (33%), Positives = 106/214 (49%), Gaps = 8/214 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+VDD L+R GI +L I+VVG+A G +A++ + DVVLMD+ MP + Sbjct: 3 IRVLIVDDQALIRTGIATLLSRKADIEVVGQAGNGREALELVASLDPDVVLMDVMMPVMD 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATRK+A +IMLT ++ + + AGA GYL K + + +IR+V G Sbjct: 63 GVEATRKLAERGPRPAVIMLTTFHDDERVLQSIAAGARGYLLKDVDHRVLADSIRTVAGG 122 Query: 122 QRYIASDIAQQMALSQIEPEKTE--------SPFASLSERELQIMLMITKGQKVNEISEQ 173 I I Q+ T + L+ RE I+ ++ +G EI EQ Sbjct: 123 GALIHPQIIAQLLPRLASLAPTPVTASSSPSDVTSILTPRERDILRLLAQGYTNQEIGEQ 182 Query: 174 LNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRH 207 L LS TV ++ +F+KL + + A H Sbjct: 183 LALSVGTVKNHLSVIFAKLAVRDRTQAALWAREH 216 >UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Actinomycetales RepID=D2AUN6_STRRD Length = 226 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 64/217 (29%), Positives = 111/217 (51%), Gaps = 5/217 (2%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VLL DD ++RAG+R IL I+VV EA G +A+ ++ DVVL+D+ MP + Sbjct: 1 MIRVLLADDEAMIRAGVRAILAADPEIEVVAEAGDGREAIDLVLSHRPDVVLLDIRMPRM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GL A ++ R ++MLT E+ A+ + GA G+L K P+E+++ I +V Sbjct: 61 DGLAAVAELRRVAPGTAVVMLTTFGEDDYIARALGEGAGGFLLKSGDPRELLAGIHAVAE 120 Query: 121 GQRYIASDIAQQMALSQIEPE-----KTESPFASLSERELQIMLMITKGQKVNEISEQLN 175 G Y++ +A ++ A+L+ RE ++ ++ +G +I+ +L Sbjct: 121 GAAYLSPRVAHRVITQLTGGRMTRVVAAREQVAALTPRERDVLALVGEGLSNGQIARRLY 180 Query: 176 LSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 L TV ++ + ++L V+ LA GL ++ Sbjct: 181 LVEGTVKAHVSAILTRLGARNRVQAAILAHEAGLLDS 217 >UniRef50_C7MRK0 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MRK0_SACVD Length = 226 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 74/217 (34%), Positives = 124/217 (57%), Gaps = 9/217 (4%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNA------VDVVLMDM 55 + V++VDDH +VR G+R LE + +++V EA+ G++AV VVLMD+ Sbjct: 11 VRVMVVDDHAIVRRGLRAYLETVPDLRLVSEAADGQEAVDLLNERHVVGDPMPHVVLMDL 70 Query: 56 SMPGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAI 115 MP + G+EATR I S DVK+++LT +E + AGAAGY+ K A P+EV +A+ Sbjct: 71 QMPRLDGIEATRSILASYPDVKVVVLTSFSEAERVHAALSAGAAGYVLKDAEPEEVATAV 130 Query: 116 RSVYSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLN 175 R+ G+ ++ + +A+ +A P+ SL+ RE I++++ +G EI+++L Sbjct: 131 RAAVKGEVHLDAAVARLLARRMASPQVG---VTSLTARERDILVLVGQGLSNREIADRLV 187 Query: 176 LSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 +S +T ++ + SKL + + LAIR GL + Sbjct: 188 ISERTARTHVSNVLSKLQLSSRTQAALLAIREGLVSP 224 >UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q1ASU8_RUBXD Length = 207 Score = 257 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 60/211 (28%), Positives = 108/211 (51%), Gaps = 7/211 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +L+ DDH ++R G+ +L G +VVGEA GE+ ++ DVVL+D+ MPG G Sbjct: 4 IRILVADDHPMLREGLSAVLGTRPGFEVVGEAGDGEEVLRLASGLRPDVVLLDLEMPGTG 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+E R++ K+++ T + + + ++ GA G L KGA+ E+ A+R+V++G Sbjct: 64 GVEVLRRLRGLDDPPKVVVFTAYDDER-LLEALREGARGCLLKGASRTEIFDAVRTVHAG 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 I +I ++ L+ REL+++ ++ +G E++ L +S +TV Sbjct: 123 GSVIPPEITARVLKEMRGES------EPLTPRELEVLRLVARGLTNREVARALFISERTV 176 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 + + +KL + +A GL A Sbjct: 177 KFHVSSLLAKLRAENRTQAVAIARERGLLRA 207 >UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0B0G6_SYNWW Length = 213 Score = 257 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 67/211 (31%), Positives = 115/211 (54%), Gaps = 2/211 (0%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 V++ DDH LVR G+R++LE IKV+ E G+ A+ R D+++MD++MPG G Sbjct: 5 RVVIADDHVLVREGLRKLLELDSNIKVIDEVGDGQGAINIARKEKPDIIIMDVNMPGTDG 64 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 + ATR I R V+II LTV+ +++AGA+ Y+ K A E+V I V +G+ Sbjct: 65 IVATRVIKRELPSVRIIALTVYEGEE-VVDMVKAGASAYILKDVAGSELVDTIHRVMNGE 123 Query: 123 RYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVN 182 I +A ++ + E +S L++RE ++ ++ KG E++E + +S KTV Sbjct: 124 VVIYPRVANRLVRELRQSENRKSEI-RLTKREKDVLTLLVKGNTNKEMAEVMFISEKTVK 182 Query: 183 SYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 ++ +F KL + A+++ + + E Sbjct: 183 NHLTSIFRKLGVKDRTHAAIYALKNRIVSEE 213 >UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FM25_SORC5 Length = 233 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 69/210 (32%), Positives = 118/210 (56%), Gaps = 1/210 (0%) Query: 4 VLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGL 63 + L+DDH +VR G R L D + VVG+A DA++ + DVVL+D+++P G+ Sbjct: 24 IYLIDDHPVVREGFARALSDEPDMVVVGQAGTAADALRETASCKPDVVLVDLNIPDRDGI 83 Query: 64 EATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQR 123 E + K+++L+ + + A+ ++AGA GYL K + +EV+ IR + +G Sbjct: 84 ELLGALRAQLPQAKLLVLSGYDDEFRVAEALRAGAQGYLVKTSKLEEVIEGIRRIATGGA 143 Query: 124 YIASDIAQQMALSQIEPEKTES-PFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVN 182 ++S IA + + +P S +L+ RE Q++ ++ G E + +L +SPKTV Sbjct: 144 PLSSSIAGAVVRAMRKPASEGSGGLDALTPRERQVLRLLAAGVSTRETAARLTISPKTVE 203 Query: 183 SYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 ++R R+++KL VELT +A+R GL A Sbjct: 204 THRVRIYAKLGCKSAVELTRIAVRTGLIEA 233 >UniRef50_A2SLK8 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiales RepID=A2SLK8_METPP Length = 226 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 76/225 (33%), Positives = 119/225 (52%), Gaps = 14/225 (6%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRT-----NAVDVVLMDM 55 MI V++ DDH +VR GI++IL D I + GEA G DA+ R DVVL+D+ Sbjct: 1 MIRVVICDDHVIVRQGIKQILADAGDIALAGEAGNGPDAMTLVRAGAAAGTPPDVVLLDI 60 Query: 56 SMPGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAI 115 +MP GL+ + + + ++ML+ + + + ++ GAAGYL+K A ++++ AI Sbjct: 61 AMPQRDGLDVLKSLKAEFPRLPVLMLSTYPDRQYAVRSLKLGAAGYLNKSADSEQMIDAI 120 Query: 116 RSVYSGQRYIASDIAQQMA---------LSQIEPEKTESPFASLSERELQIMLMITKGQK 166 R V G+ +I +A+Q+A + LS RE Q+ ++ G+ Sbjct: 121 RRVAQGKLFITPSVAEQLAGAVGAGIGSRKGGVGDDEAPLHERLSHREYQVFGLLAAGKS 180 Query: 167 VNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V EI+EQL LS TV++YR R+ K + DVEL A+R L Sbjct: 181 VGEIAEQLVLSSNTVSTYRARILEKTGVRNDVELALYAVRQELMQ 225 >UniRef50_C6CZA5 Two component transcriptional regulator, LuxR family n=4 Tax=Firmicutes RepID=C6CZA5_PAESJ Length = 221 Score = 257 bits (657), Expect = 2e-67, Method: Composition-based stats. Identities = 67/214 (31%), Positives = 115/214 (53%), Gaps = 5/214 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAV----DVVLMDMSM 57 + V++VDDH++VR G+R L +VV EA G+ A+ DV+LMD+ M Sbjct: 7 LKVMIVDDHDMVRTGLRTYLMLEPKFEVVAEAGSGQAAISMLEAGLPSGLPDVILMDLMM 66 Query: 58 PGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRS 117 PG+ G+E TR++ ++KIIMLT E+ ++AGA Y+ K + +E++ A+ Sbjct: 67 PGMDGIETTRQLIVEYPNLKIIMLTSFLEDDKVYGAIEAGAVSYVLKTVSAEELIYALHG 126 Query: 118 VYSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 G + +D++Q + + +S L+ERE +++L+I +G+ EI E+L++S Sbjct: 127 AVKGMPVMTADVSQALTRG-LRQRTAQSGDEELTEREKEVLLLIAEGRSNKEIGEELHIS 185 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 KTV ++ + K + +L LA R G Sbjct: 186 VKTVKTHVSNLLMKCELEDRTQLAVLAHRKGWVK 219 >UniRef50_B6JD38 Two component transcriptional regulator, LuxR family n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JD38_OLICO Length = 210 Score = 257 bits (657), Expect = 2e-67, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 125/209 (59%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 M +++ DDH + R G+R+IL + +VGEA+ G+D + R D+VL+D+SMPGI Sbjct: 1 MTRIIIADDHTIFREGLRQILAEANDFTLVGEATNGDDLLVRLREAPCDIVLLDLSMPGI 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+ R +II+L++H E+ + ++AGA GY++K +A ++++AIR V Sbjct: 61 SGITLVRAAREIAGAHRIIVLSMHEEHQYVVEALKAGADGYVTKNSASDQLIAAIRKVSQ 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+ ++++ +Q+ L ++ TE P L+ RE ++ M+ G K++ I+ L+LS KT Sbjct: 121 GELFVSAAASQEAILREMRTSPTELPHTRLTRREREVFDMLVAGHKISRIARDLDLSIKT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 V++++ + +K++ +L A+RH L Sbjct: 181 VSTHKTNLLAKMDAETTADLVRYALRHDL 209 >UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 Tax=Dehalococcoides RepID=D2BGT0_DEHSV Length = 232 Score = 257 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 71/216 (32%), Positives = 119/216 (55%), Gaps = 3/216 (1%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 VL+ DDH ++R G+ R+L K I+VVGEA G++AV DVVLMD+ MP + G Sbjct: 5 KVLIADDHAVLREGMSRLLSQEKDIEVVGEAGDGQEAVDMVAQFKPDVVLMDIVMPRLTG 64 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 +EAT+ I ++ I++LT +++ +++AGA+GYL K A E+V AIR++ +G+ Sbjct: 65 VEATKLIKKNNPSTCILILTAYSDIRYILGLLEAGASGYLLKSAKSDEIVGAIRAIKAGE 124 Query: 123 RYIASDIAQQMALSQIEPEKTESPFA---SLSERELQIMLMITKGQKVNEISEQLNLSPK 179 + S +++ + K LS RE++I+ + +KG EI+++L LS + Sbjct: 125 SVLDSIATRKLLERVVNVSKESDEDKVRGQLSPREVEILQLASKGLSNREIADKLTLSMR 184 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETL 215 TV ++ +F+K+ E R G E + Sbjct: 185 TVKAHLSNIFNKMRCSCRTEAIVKGFREGYVMLEDV 220 >UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacillales RepID=C0ZDE8_BREBN Length = 214 Score = 257 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 70/212 (33%), Positives = 122/212 (57%), Gaps = 2/212 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMP-G 59 MI VLLVDDH ++R G+R +LE IK+VGE+ G DA+ DVVLMD+S+P G Sbjct: 1 MIRVLLVDDHTMIRKGLRVLLESYSQIKIVGESHTGNDAILKANQLKPDVVLMDLSLPNG 60 Query: 60 IGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVY 119 + G A+++I +S VKI++LT+H E + + GA GY+ K + + + AI VY Sbjct: 61 LDGFTASKEIRKSNPLVKIVILTMHDEEIFVQEAITVGAHGYILKNSHGELLFQAIVEVY 120 Query: 120 SGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 G+ + + ++Q++ + + P + L+ RE +++ +I G E++++L +S K Sbjct: 121 RGKCFYKTSVSQEIINLWLRSDAKTLP-SVLTLREKELVRLIVLGYSNKEMADKLLISVK 179 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 TV +++ + KL + +L AI++ + Sbjct: 180 TVENHKTNIMQKLGLDSKHQLIQYAIKNRYLD 211 >UniRef50_A9VLR5 Two component transcriptional regulator, LuxR family n=31 Tax=Bacillaceae RepID=A9VLR5_BACWK Length = 595 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 59/214 (27%), Positives = 111/214 (51%), Gaps = 3/214 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 +I +L+VDD VR +R +L+ + + VVG A G A+ C V+LMD+ M + Sbjct: 382 LIRLLIVDDQPFVRESLRTLLDRYEDLNVVGLAEDGNQAIDLCGRLQPHVILMDLDMQHM 441 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EAT+KI + +++++ T + + ++ GA G+L K E+ + IR ++ Sbjct: 442 DGVEATKKIKQQWPHIRVLIFTTFQDTEQALESLRNGADGFLLKSIETLELANTIRLIHK 501 Query: 121 GQRYIASDIAQQMALS---QIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 G I ++ ++ QIE ++++ L+ RE++I+ ++ KG + I+ +L LS Sbjct: 502 GGTLIDQGMSHKIFEKFDEQIETPQSKATAYELTAREIEILQLVAKGLRYTTIASRLYLS 561 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 TV +Y ++KL + E A+ G+ Sbjct: 562 NGTVRNYASTAYTKLGVRNKEEAVQKALEIGIIE 595 >UniRef50_A1VB77 Two component transcriptional regulator, LuxR family n=5 Tax=Desulfovibrio RepID=A1VB77_DESVV Length = 216 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 71/211 (33%), Positives = 123/211 (58%), Gaps = 2/211 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V++V+D ++VR GI+ +L+ +VGEAS G +A++ +A D+VLMD+++P + Sbjct: 3 ITVVIVEDLDIVREGIKALLDANGEFIIVGEASDGIEALRIVEKHAPDIVLMDLTLPVME 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G EA R+I R K++ LT H ++ L + + AGA GYL K A+ + A+++V +G Sbjct: 63 GAEAIREIKRRRETTKVLALTAHKKDSLIYRTLSAGADGYLLKNASRDILFQAMQTVLAG 122 Query: 122 QRYIASDIAQQMALSQIEPEKTE--SPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 +RYI+ +I+ + + + + S LS+RE Q++ ++ +G ++E+L +S K Sbjct: 123 RRYISPEISDLLIDDFLRHGRRDEASMLDLLSDREKQVLKLVAEGHGNKAVAEKLCISHK 182 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 TV ++ + KL EL AI HGL Sbjct: 183 TVEKHKANLKRKLGTASTAELVTFAIEHGLT 213 >UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 Tax=Vibrio RepID=C9QDP7_VIBOR Length = 209 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 60/211 (28%), Positives = 114/211 (54%), Gaps = 2/211 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI ++L DDH L++ G++ LE + ++ G +A++ DV+L+D++MP + Sbjct: 1 MIRLILADDHRLMQDGLKSRLEREDNLDIIACVGTGTEALEATLELKPDVLLLDINMPNL 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+E ++A++++ +IML++H + ++AGA GY+ K +E+V AI V Sbjct: 61 NGIEVLEQLAKTSSATSVIMLSMHDSRDYVVRSVKAGAKGYVLKDVGSEELVMAINQVAQ 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+ Y+ + ++ E + + +LS+RE ++ I G EI++ L++S +T Sbjct: 121 GRSYLCPQASDRLLEQINEAPEEKD--DTLSKRESDVLKAIANGAGNKEIADSLHISVRT 178 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V ++R R+ KL L LA++ GL Sbjct: 179 VETHRLRIKKKLGATSTAALVKLALQKGLVT 209 >UniRef50_C7Q058 Two component transcriptional regulator, LuxR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q058_CATAD Length = 258 Score = 256 bits (656), Expect = 4e-67, Method: Composition-based stats. Identities = 69/249 (27%), Positives = 118/249 (47%), Gaps = 39/249 (15%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 M+ VL+VDD L+RAG+ IL G +VVGEA G +AV DVVLMD+ MP + Sbjct: 1 MVKVLIVDDQVLIRAGMAAILRAAPGYEVVGEACDGVEAVTMAALTEPDVVLMDIRMPDM 60 Query: 61 GGLEATRKIARSTAD--VKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSV 118 G+ ATR I S + +I++LT + + ++AGA G++ K P+ +++A+++V Sbjct: 61 DGIAATRAILGSGRENLPRILILTTFDMDQYVYEALRAGADGFVLKDTPPERLLAALKAV 120 Query: 119 YSGQRYIASDIAQQMALSQI------------------------------EPEKTESP-- 146 G +S + +++ + + + + P Sbjct: 121 ADGDTLFSSTVTRRLVQAYVTATGLDGEPQGPGPGPGPGPVATPAPGLVPRSRRPDGPSS 180 Query: 147 -----FASLSERELQIMLMITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELT 201 A+L+ RE ++ ++ G EI+E+L +S TV ++ R +KLN+ + Sbjct: 181 AERAALAALTTRETDVLRLVATGLSNGEIAERLVVSEGTVKTHLNRAMAKLNLSSRAQAV 240 Query: 202 HLAIRHGLC 210 LA GL Sbjct: 241 VLAYESGLV 249 >UniRef50_B7AAT6 Two component transcriptional regulator, LuxR family n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AAT6_THEAQ Length = 207 Score = 256 bits (656), Expect = 4e-67, Method: Composition-based stats. Identities = 69/210 (32%), Positives = 121/210 (57%), Gaps = 3/210 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI V+LV+DH LVR+G+R +LE ++VVGEA +A++ DV ++D+S+P Sbjct: 1 MIRVVLVEDHLLVRSGLRHLLEARGPVRVVGEAGSCREALELLEKVQADVAILDVSLPDG 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+ +++ +++++ L++H + +QAG GY+SK A QE++ A+ +V Sbjct: 61 TGIALCQRLRERFPELRLLALSMHEDLEYVRGFLQAGGQGYVSKAAVDQELLDAVLAVAR 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+RY+ +A ++A+ + E+P LS RE +++ ++ +G E++E+L +S KT Sbjct: 121 GERYLNPALAMRLAMELVRESAEEAP---LSPREEEVLRLLAQGLSHKEVAEKLGISEKT 177 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 V +YR R KL + EL A R G Sbjct: 178 VATYRERGMEKLGLASRSELLRYAARKGWI 207 >UniRef50_C1TL62 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL62_9BACT Length = 217 Score = 256 bits (656), Expect = 4e-67, Method: Composition-based stats. Identities = 59/211 (27%), Positives = 114/211 (54%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I ++L+DDH+L R G++++LE + GEAS G + + + + DVVL+D+ MP + Sbjct: 4 IRMVLIDDHKLFRDGMKKLLEMEPDFSLEGEASDGIEGLALIKRSRPDVVLLDIGMPNLD 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ R++ + + K + +T + +++ G G++ K + E++SAIRSV G Sbjct: 64 GIGLIRELRSTEQNTKFVAITAFNDERKLSELSSVGVHGFVLKSSGRTELLSAIRSVARG 123 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Q Y+ +A + + + + L++RE +++ + +G EIS ++NLS KTV Sbjct: 124 QCYVDPKVAGLLLGAFHKKQDEADMLCDLTDREKEVLFWLAQGLSNLEISAKMNLSEKTV 183 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 ++ + KL++ + LA R G+ + Sbjct: 184 KNHVSHILKKLDLRDRTQAAILAWRVGIAES 214 >UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0L7_PELTS Length = 223 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 63/214 (29%), Positives = 122/214 (57%), Gaps = 4/214 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +LLVDD LVR +R + E I VVGEAS GE+A+K ++LMD++MP + Sbjct: 9 IQLLLVDDDPLVRRSLRMLFELH-DINVVGEASNGEEALKAIARLKPTMILMDVNMPKMD 67 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++A + I + D+++I+LTVH ++ + ++ G + Y+ K + P++++ + SV G Sbjct: 68 GIQALKAIKTNYPDIQVIILTVHNQHEKVVQAIRDGCSAYVLKDSPPEQLIEVVESVAEG 127 Query: 122 QRYIASDIAQQMALSQIEP---EKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 + ++ + IA ++ ++ ++ + L+ RE +++ +I G EI+ +LN++ Sbjct: 128 RYFVDTSIANELLVNLVQGTPRRQHPKNLPLLTLREKEVLQLIVNGLSNKEIAGKLNITL 187 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 +TV ++ + KLN++ + LAI+ L Sbjct: 188 RTVKAHVSSILMKLNVNDRTQAAVLAIQENLVQP 221 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 69/210 (32%), Positives = 112/210 (53%), Gaps = 6/210 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+ DDH +VR G++ L+ + VV EA G++A+ + DVVL+D++MPG Sbjct: 5 IRVLVADDHPIVRQGLKTFLDIQPDLSVVAEARDGDEALALIAAHEPDVVLLDLNMPGSD 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G + ++A S K+I+LT TE + + AGAAG+L K P + AIRSV G Sbjct: 65 GAKVLTRLAASDHRAKVIVLTSVTEAVRVTEAVAAGAAGFLYKDIDPDSLAQAIRSVADG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Q A + M P A+L+ RE +++ ++ G+ EI++QL+++ KTV Sbjct: 125 QVIFAREAVTAM------TAPAPGPVAALTAREREVLALVAAGRSNREIAKQLSVAEKTV 178 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++ +F KL + + A+ HG+ Sbjct: 179 KTHLSSLFRKLGVADRTQAALYAVTHGMAG 208 >UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, putative n=2 Tax=Shewanella RepID=B8CN77_SHEPW Length = 206 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 65/209 (31%), Positives = 113/209 (54%), Gaps = 5/209 (2%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VLLVDDH L R G+R L I+V+ EA G+ A++ VD+VL D++MP + Sbjct: 1 MIRVLLVDDHPLFREGLRYRLSLDSDIEVLAEADNGQQALEILNKMPVDLVLTDINMPQM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+ I K++ML++H M+ GA GY+ K +E++ AI+ V + Sbjct: 61 DGMYLLELIKEQELSCKVVMLSMHDNKEYIMATMRYGADGYILKDVPGKELIEAIKKVAA 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+RY ++D+ ++ ++ A +++RE ++ +I+ G I++++++S +T Sbjct: 121 GKRYFSADVINTLSQELASGKQ-----ALVTQREQLVLRLISLGMNNKRIAQEMDVSVRT 175 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 V +++ + KL I L AI HGL Sbjct: 176 VETHKRNIKQKLMIDSTAGLVRYAIDHGL 204 >UniRef50_D1CI66 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1CI66_THET1 Length = 218 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 67/211 (31%), Positives = 117/211 (55%), Gaps = 3/211 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + VL+ DDH L R +R +LE G++VVGEA G++AV+ R DVVLMD+ MPG+ Sbjct: 1 MRVLIADDHALFRDSLRTLLEAR-GVEVVGEAETGKEAVELARELRPDVVLMDLKMPGMD 59 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GL ATR I+ +VK+++LT ++ + +++GA GY+ K + + + G Sbjct: 60 GLAATRMISAEMPEVKVVVLTASEDDEDLFEAVKSGALGYMFKDVRSDQFFELLEAASRG 119 Query: 122 QRYIASDIAQQMALSQIEPE-KTESPFASLSERELQIMLMITKGQ-KVNEISEQLNLSPK 179 + +A+++ +P + E L+ERE +I+ ++ +G E++E+L LS Sbjct: 120 EPAFTPGLARKLLREMSKPAGRAEREPEVLTEREQEILELLVQGVTSNKELAERLILSEN 179 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 TV + + KL++ ++ A++HGL Sbjct: 180 TVKYHLRNILDKLHLQNRTQVVAYALQHGLV 210 >UniRef50_B8ET67 Two component transcriptional regulator, LuxR family n=12 Tax=Proteobacteria RepID=B8ET67_METSB Length = 223 Score = 256 bits (655), Expect = 5e-67, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 127/211 (60%), Gaps = 2/211 (0%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 +LLVDDH +VR G R +L+ +KVV EA G +A + + D+V+MD++MPG+GG Sbjct: 6 TILLVDDHAIVREGYRALLQQQPRLKVVAEAGDGAEAYRLFKQVKPDLVIMDLTMPGLGG 65 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 +EA ++I + +I++ T+H + ++AGA GY++K + P+ ++ V G+ Sbjct: 66 VEAVKRIRQWDPAARILVFTMHQNAAFAVQAIRAGAKGYVTKSSPPEALIRGAFDVLQGR 125 Query: 123 RYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVN 182 +++DI ++ALS++ +T + L+ RE +I+ ++ + I+ L LSPKTV Sbjct: 126 IALSADIDHELALSRV--TETPTATDVLTPREFEILRLLLAEKSTEAIAAILGLSPKTVA 183 Query: 183 SYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 + RY + +KL + D+EL +A+R G+ AE Sbjct: 184 NTRYLIKAKLGVASDIELVLVALRQGILGAE 214 >UniRef50_A2SCN0 Two-component response regulator n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SCN0_METPP Length = 210 Score = 256 bits (655), Expect = 5e-67, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 129/210 (61%), Gaps = 2/210 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V+LVDDH +VR G +R+LE I VV EA G +A+ R VV++D+ +PG+G Sbjct: 3 IRVMLVDDHAIVREGYKRLLELQSDIVVVAEAGDGGEALNQWRALRPAVVVIDLGLPGMG 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLE ++ + +++ ++H + A+ ++AGA GY++K +AP ++V+A+R V G Sbjct: 63 GLELIARLRQRDEACRMLAFSMHRDAVWVAQALRAGALGYVTKSSAPSQLVAAVREVNQG 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 +R ++ D++ ++A + ++P+ +S LS RE ++M ++ G+ EI++ L+LS KTV Sbjct: 123 RRVLSPDVSGEVASALLDPQ--DSAAHGLSPREFEVMRLLVGGRTPQEIAQSLSLSVKTV 180 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++ Y++ SKL D EL +A + G Sbjct: 181 HNVHYQIKSKLGTASDFELARMAWQRGWIG 210 >UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betaproteobacteria RepID=Q5NZX4_AZOSE Length = 211 Score = 255 bits (654), Expect = 5e-67, Method: Composition-based stats. Identities = 78/204 (38%), Positives = 130/204 (63%), Gaps = 2/204 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VL+ DDH LVR G++ + ++ ++VV EA+ G + + +T V+L+DMSMPG+ Sbjct: 1 MIRVLVADDHFLVREGLKMTIAAMQDVEVVAEATNGGEVLAAIKTCNAHVLLLDMSMPGL 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G++ R++ + I++L+++ E L AKV+Q+GA+GY++KG + ++SAIR V S Sbjct: 61 SGVDLVRRVKSEWPGLPILVLSMYGETQLAAKVLQSGASGYVTKGKGREILLSAIRKVAS 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G RYI D+A+++ P T S L+ RE QI+ M+ G+ V +I+ +L++SPKT Sbjct: 121 GHRYIDPDLAEKILFDVRMP--TASVQEQLTHRESQILRMLQAGKSVTQIANELSVSPKT 178 Query: 181 VNSYRYRMFSKLNIHGDVELTHLA 204 V++++ R KL+ +VEL A Sbjct: 179 VSTHKIRAMQKLHCQNNVELLKYA 202 >UniRef50_C5V5K1 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K1_9PROT Length = 211 Score = 255 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 74/208 (35%), Positives = 131/208 (62%), Gaps = 1/208 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +++ DDHELVRAG+ ++ E GI+VVGEA GE+ ++ + VD+VL+D+ MPG Sbjct: 3 VRLIVTDDHELVRAGLLQLFEGAPGIEVVGEAVNGEELMRKLQATQVDLVLLDLDMPGEN 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G +I R D+ I++L+ H E + ++ +QAGA+GY+ K +P+ ++ AI V + Sbjct: 63 GANLIERIRRHYPDLLILILSAHDEIKVVSRAVQAGASGYICKDCSPKTLLEAIHKVVAT 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 +Y++ +A+++A + P+ S A LS RE +I ++ +G ++IS QL +S +TV Sbjct: 123 GKYLSPLMAEELAYTSAIPQANNS-LALLSSREQEIFRLLVEGLSNDDISRQLFISDRTV 181 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 ++++ + +KL + VEL H +I+H L Sbjct: 182 SAHKINLLNKLGLKNVVELVHYSIQHQL 209 >UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 Tax=Bacillales RepID=C0Z7M8_BREBN Length = 602 Score = 255 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 65/221 (29%), Positives = 113/221 (51%), Gaps = 11/221 (4%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 +I +++VDDH +R +R ILE + ++VVG A G AV+ C D+VLMD+ MP + Sbjct: 382 IIRLVIVDDHSFIRESLRSILEGQRDLRVVGLAEDGAQAVELCEELEPDLVLMDLEMPNM 441 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+ AT++I ++I++L+ + ++M++GA GYL K +E+ IR V+ Sbjct: 442 DGITATKRIKEKWPGIRILVLSTFQDTEKAKEIMRSGADGYLLKSIESRELAETIRLVHR 501 Query: 121 GQRYIASDIAQQMALSQ-----------IEPEKTESPFASLSERELQIMLMITKGQKVNE 169 G IA D+ +M Q + + + L++RE +I+ M+ +G + Sbjct: 502 GGTMIAQDLFHKMLDGQPVNGQEDLLVAPKQSEKDENAYGLTKREQEILQMLAQGMRYKT 561 Query: 170 ISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 I+ +L LS TV +Y ++ KL + + GL Sbjct: 562 IASKLYLSDGTVRNYASALYDKLGVRNRDDAVQKGKMEGLV 602 >UniRef50_Q11YW8 Two component transcriptional regulator, LuxR family n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YW8_CYTH3 Length = 215 Score = 255 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 62/211 (29%), Positives = 123/211 (58%), Gaps = 2/211 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I++++ DDH L+R GI+ +L+ + +VVGEA+ G++ +++ T ++V++D++MP Sbjct: 5 ISIIIADDHTLIRDGIKSLLQSVDEFEVVGEATDGDELIQFIDTLDPEIVVLDITMPKKS 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+E ++ + VK I+L++H K +Q+GA YL K +E++ A+++V +G Sbjct: 65 GIEVITEVKKYNNRVKFIVLSMHDNPEYVLKSVQSGALSYLLKNTDHEEIIKAVKAVSAG 124 Query: 122 QRYIASDIAQQMALSQIEPE--KTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 Q+Y + DI + PE K +L++REL+++ ++ G I+++L +S + Sbjct: 125 QKYFSPDIYSIILNGLANPELVKASQIAETLTKRELEVLKEVSMGLSTKLIADKLFISVR 184 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 TV ++R + KL++H EL A+ + Sbjct: 185 TVETHRINLMKKLDVHNSAELIKKAMDLNII 215 >UniRef50_Q2BNZ3 Transcriptional regulator, LuxR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNZ3_9GAMM Length = 223 Score = 255 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 86/222 (38%), Positives = 138/222 (62%), Gaps = 14/222 (6%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMP--- 58 I +LLVDDH LVRAG +R+L + I++VGEA G+ A + ++ DVV+MD++MP Sbjct: 5 IKILLVDDHPLVRAGFQRLLISDESIEIVGEADNGQSACEMYASHMPDVVIMDLNMPSDA 64 Query: 59 ---GIG-----GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQE 110 + GLEA R+I K+++LT +P PA V+ AGA G+L+K AP E Sbjct: 65 NTEEMSNNLNGGLEAIRRIISHDPKAKVLVLTAMEIDPFPAHVVNAGAKGFLTKRCAPDE 124 Query: 111 VVSAIRSVYSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEI 170 ++ A++++++G+ YI +I ++ + ASL++RELQI ++ +G+ V+ + Sbjct: 125 LLEAVKAIHAGEEYITEEIRLRITEG---GSADGASLASLTKRELQIFSLLAEGRTVSIV 181 Query: 171 SEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 +E++ LSPKTV+++R +F KL I + EL HLAIRH + A Sbjct: 182 AEEMFLSPKTVHAHRTNIFRKLKISNNSELVHLAIRHNIVQA 223 >UniRef50_UPI0001789139 two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=UPI0001789139 Length = 216 Score = 255 bits (654), Expect = 7e-67, Method: Composition-based stats. Identities = 64/209 (30%), Positives = 106/209 (50%), Gaps = 6/209 (2%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRT-NAVDVVLMDMSMPG 59 MI+VL+ DD +R ++ ++ I+V A GE+A+ DVVLMD+ MP Sbjct: 1 MISVLIADDDPFIRESLKLLVGMDPDIEVSAVAEHGEEALSLLMDGLHADVVLMDIRMPV 60 Query: 60 IGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVY 119 G+E TR+I DV+++MLT ++ + ++ GA+GYL K P ++ I++V+ Sbjct: 61 CDGVEGTRRIRERYPDVRVLMLTTFDDDDYIVEALRNGASGYLLKNIPPDRIIQGIKTVH 120 Query: 120 SGQRYIASDIAQQMA-----LSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQL 174 G I DIA+++ Q P E L+ E +++ +I +G EI+ QL Sbjct: 121 DGNMLIHPDIARKLTGMLRPTPQPVPRSAELEQFGLTPAEKRVVALIAEGLSNKEIAAQL 180 Query: 175 NLSPKTVNSYRYRMFSKLNIHGDVELTHL 203 LS TV +Y + KLN+ ++ Sbjct: 181 YLSEGTVKNYVTEILGKLNLRDRTQIAIF 209 >UniRef50_B0C7V6 Two-component response regulator n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7V6_ACAM1 Length = 222 Score = 255 bits (653), Expect = 7e-67, Method: Composition-based stats. Identities = 64/217 (29%), Positives = 117/217 (53%), Gaps = 8/217 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I++LLV+DH L+R G++ +V+GEA G+ A+ ++VLMD+ +P + Sbjct: 6 IHLLLVEDHALMRMGLKGQFSLESDFEVIGEAENGQQAIDLAAQLQPNIVLMDIELPILD 65 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ AT+KI + D++++ L+ ++ ++ AGA GY K Q++++ IR + G Sbjct: 66 GISATQKIKATCPDIRVLALSAFGKDNQVVGMLAAGADGYCLKSIDWQQLLAVIRLIQGG 125 Query: 122 QRYIASDIAQQMAL--------SQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQ 173 Y+ IA ++A + + +P LS+RE +++ +I++G EI+ Q Sbjct: 126 GTYLDPQIAHKLASMLKSANTPTTAPAHRQTAPATVLSDREREVLQLISEGCSNQEIANQ 185 Query: 174 LNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 L LS T+ SY + +KL++ V+ A+R GL Sbjct: 186 LYLSLGTIKSYVRMILNKLSVDDRVQAAAKAVREGLI 222 >UniRef50_A9B4P1 Two component transcriptional regulator, LuxR family n=11 Tax=Bacteria RepID=A9B4P1_HERA2 Length = 257 Score = 255 bits (653), Expect = 8e-67, Method: Composition-based stats. Identities = 66/225 (29%), Positives = 117/225 (52%), Gaps = 14/225 (6%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + VL+VDDH L R G+R L + IK++GE S E+ + + DVVL D+++P + Sbjct: 5 VKVLMVDDHPLFRQGVRWALSSERDIKIIGEGSSAEEGLVLISEHEPDVVLTDLNLPNMD 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLE TR I R ++ ++ML+V+ + ++AGAA Y SK +P+ + + +R V G Sbjct: 65 GLEFTRTIRRQYPNIGVVMLSVYESDEHAFNALRAGAAAYYSKEISPKTLATVLRRVARG 124 Query: 122 QRYI------ASDIAQQMALSQI--------EPEKTESPFASLSERELQIMLMITKGQKV 167 + I +A ++ EP+ S F+ LS+RE++++ I G Sbjct: 125 EYVINDVMFEDPRVADRILTQFRGLQTGIVAEPDLDISLFSPLSDREIEVLEHIASGATN 184 Query: 168 NEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 +I++ L +S +TV ++ + KL+++ + A+R G Sbjct: 185 KDIADALKISTQTVKNHISSILRKLSLNDRTQAVLYALRRGWIET 229 >UniRef50_C7NKN7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=138 Tax=Bacteria RepID=C7NKN7_KYTSD Length = 244 Score = 255 bits (653), Expect = 8e-67, Method: Composition-based stats. Identities = 70/221 (31%), Positives = 114/221 (51%), Gaps = 17/221 (7%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 + LVDD LVRAG R +L+ + VVGEA G+ AV +T A DVVLMD+ MP + G Sbjct: 4 RIFLVDDQSLVRAGFRMVLDAQPDMSVVGEAPDGQSAVDQLKTIAADVVLMDIRMPRLDG 63 Query: 63 LEATRKI--ARSTA---DVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRS 117 +EATR + + K+++LT + ++AGA+G+L K A P+E+++AIR+ Sbjct: 64 IEATRVLLGRDKHPGGAEPKVVVLTTFDMDEYAYAALEAGASGFLLKDAGPEELLAAIRA 123 Query: 118 VYSGQRYIASDIAQQMALSQI------------EPEKTESPFASLSERELQIMLMITKGQ 165 V SG +A +++ + E+ E L+ERE ++ + G Sbjct: 124 VASGDAVVAPSTTKRLLERFVPTLTPEVADVASPAEQQEYLREVLTEREYEVFEAVAAGL 183 Query: 166 KVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIR 206 EI+++L ++ T+ ++ R+ KL V+L A Sbjct: 184 SNTEIAKELFVAEATIKTHIGRLLFKLGCRDRVQLVITAYE 224 >UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microscilla marina ATCC 23134 RepID=A1ZEE6_9SPHI Length = 213 Score = 255 bits (653), Expect = 8e-67, Method: Composition-based stats. Identities = 62/213 (29%), Positives = 113/213 (53%), Gaps = 3/213 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVK-WCRTNAVDVVLMDMSMPG 59 MI +V+DH +VR G++++L +KV+ E + + + D+VL D+++PG Sbjct: 1 MITFYIVEDHTIVRQGLKQLLAKYAEMKVLAEFGVPDQIMDNLAKGERPDIVLCDINLPG 60 Query: 60 IGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVY 119 + GL T KI + D KII+LT+H + K AGA GY K E++ I+ +Y Sbjct: 61 MDGLALTEKIKQKYPDQKIIILTMHQKEFYVLKAFDAGADGYFHKDTEESELIMGIKKIY 120 Query: 120 SGQRYIASDIAQQMALSQIEPEKT--ESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 +GQ+Y ++Q + ++ + + ++ +L+ RE +++ + G EI ++L +S Sbjct: 121 NGQKYFCQSVSQILINRLLDTKNSSGKTLLPTLTFREKEVLEQVVAGLGNREIGDKLCIS 180 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 +TV ++R + K + VEL AI + L Sbjct: 181 TRTVENHRANILRKFGLKNTVELVKFAIENSLV 213 >UniRef50_B4D808 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D808_9BACT Length = 212 Score = 255 bits (653), Expect = 9e-67, Method: Composition-based stats. Identities = 66/212 (31%), Positives = 108/212 (50%), Gaps = 8/212 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +LLVDDH +VR+G+ +L VV EA E AV R + DV LMD+ MPG Sbjct: 7 IRLLLVDDHFVVRSGLAMLLAQQDDFAVVAEADDAEQAVAHYRQHRPDVTLMDVRMPGAS 66 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA ++I D ++IMLT + + + ++AGA GYL K E+ +A+R V++G Sbjct: 67 GIEALQRIRGEFPDARVIMLTTYDLDEDVFRALEAGAVGYLLKSVRHAELFAAVRKVHAG 126 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 +R + + + K + + LS RE++ + ++ +G EI L ++ +T Sbjct: 127 ERCVPQSLETR--------CKNGALRSRLSPREVETLDLLARGFSNREIGSALGVTERTA 178 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 ++ + KL E A + GL A+ Sbjct: 179 KAHVQAILVKLEAADRAEAVDAAYKRGLLRAD 210 >UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XAQ5_9BACT Length = 229 Score = 255 bits (652), Expect = 9e-67, Method: Composition-based stats. Identities = 59/216 (27%), Positives = 119/216 (55%), Gaps = 4/216 (1%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 +LLVDDH ++R G+R+I+ + + V GEA A++ ++ D+VL D+++P G Sbjct: 14 KILLVDDHPMMREGLRQIIGNEIDLAVCGEAENAFQALELVKSEKPDLVLADITLPDKNG 73 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 LE + + + ++++++H E +V++AG GY+ K ++++ AIR V SGQ Sbjct: 74 LELLKDLQAQHPKLPVLVISMHDEALYAERVLRAGGRGYIMKHEGGKKIMQAIRHVLSGQ 133 Query: 123 RYIASDIAQQM--ALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 +++ ++ ++ S + SP +L++RE ++ +I +G EI+ +++S KT Sbjct: 134 IFVSEKMSARILELFSGHGTQAASSPIENLTDREFEVFRLIGEGLSTKEIAANMHVSAKT 193 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLS 216 V +R + +KL + EL +R +++ S Sbjct: 194 VEVHRMNIKTKLGLKTAAELIRYTVR--WVESQSTS 227 >UniRef50_A0NNP3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NNP3_9RHOB Length = 205 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 120/207 (57%), Gaps = 2/207 (0%) Query: 5 LLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGLE 64 +L DDHELVR GIR L+ + ++VVGEA+ G +A+ DV+LMD+SMP + GLE Sbjct: 1 MLADDHELVRDGIRARLQKVADLEVVGEATNGREALTLAHDLRPDVLLMDVSMPVMNGLE 60 Query: 65 ATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQRY 124 A ++ + ++ +++L+V+ V+QAGA GY+ K + E+++AI SV SG Y Sbjct: 61 AATQMRKLLPEIAVLILSVYDNPEYVRGVVQAGARGYILKDISAAEMITAITSVASGGYY 120 Query: 125 IASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVNSY 184 +S + + + E P+ L++RE Q++ I +GQ E++++L +S +TV S+ Sbjct: 121 FSSAVGPTLVGAGTS-APVEDPY-GLTDRERQVLTAIARGQPNKEVAKELGISVRTVESH 178 Query: 185 RYRMFSKLNIHGDVELTHLAIRHGLCN 211 R + K+ +L +A GL + Sbjct: 179 RLNLREKVGNKNAAQLYKVAQDLGLLD 205 >UniRef50_A1ASJ5 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfuromonadales RepID=A1ASJ5_PELPD Length = 208 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 76/209 (36%), Positives = 121/209 (57%), Gaps = 6/209 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +L+ DDH +VR G+ ILE G+ V GEA G DA+ DVV+MD++MP + Sbjct: 3 VRILIADDHAIVREGLTMILES-SGMIVAGEARDGRDALSQTEVLRPDVVVMDIAMPELN 61 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++ATR I +VK+I+L++H + MQAGA YL K +A +V A+R+V G Sbjct: 62 GIDATRMIHGRLPEVKVIVLSMHNTREHVFRAMQAGARAYLLKESAGSGLVDAVRAVIRG 121 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + Y + A++ +SP SLS RE +++ ++ +G+ EI+E L+LSPK++ Sbjct: 122 ECYFGEGVDAPQAVAGF-----KSPLDSLSLREREVIQLVVEGRTSAEIAELLSLSPKSI 176 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 +YR R+ KL + L A++HG+ Sbjct: 177 ETYRSRLMVKLGVGNIPALVKFALQHGIT 205 >UniRef50_C4XNR8 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNR8_DESMR Length = 220 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 68/211 (32%), Positives = 125/211 (59%), Gaps = 4/211 (1%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 ++L DDH ++R G+R ++++ VVGEA+ GE + +V+++D+SMP + G Sbjct: 5 RIILADDHTVLRTGLRLLIDNQPDFTVVGEAADGEALLALVERVPAEVLVLDLSMPRVSG 64 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 LE +++ ++KI++LT+H + M AGA GY+ K A E+ AIR+V SG+ Sbjct: 65 LECIKELKSRGQEIKILVLTMHG-REYVKEAMAAGALGYIEKQALDSELFVAIRTVASGR 123 Query: 123 RYIASDIAQQMALSQIEP---EKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 RY++ D A+ + + P + P+A L+ RE +++ ++ +G + +I+ L+LS K Sbjct: 124 RYMSPDNAEVLLDQLLSPTPQAASPDPYAVLTAREREVLKLLVRGHTLTQIAGLLHLSVK 183 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 T+++++ + KLN+ +L A+RHGL Sbjct: 184 TIDTHKTHVMEKLNLTHKSQLVDYALRHGLL 214 >UniRef50_B4D831 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B4D831_9BACT Length = 209 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 64/213 (30%), Positives = 113/213 (53%), Gaps = 8/213 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+VDDH ++R G+ + + + +VGEA+ G ++ R + DVV MD +PG Sbjct: 5 IRVLIVDDHAMMRLGLVEAIAGERDLTLVGEAANGTQCLEQYRKHQPDVVTMDFRLPGAD 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G E+T + D ++++L+V + ++AGA GY+SK A +EV+ AIR V G Sbjct: 65 GAESTAHLRTEFPDARVVVLSVFEGEEDIWRAVEAGAMGYVSKSAEVEEVLEAIRCVVGG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + Y + IA ++A + +L+ RE Q++ I G EI+ L++S TV Sbjct: 125 ETYFPAPIASKLASRRTR--------DALTPREHQVLHHIVAGLSNKEIAAALHMSEATV 176 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 + +KL++ + +A++ G+ + +T Sbjct: 177 KLHISNTLAKLHVADRTQAAIVAVQRGIIHLDT 209 >UniRef50_C6C0G1 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0G1_DESAD Length = 218 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 73/205 (35%), Positives = 119/205 (58%), Gaps = 3/205 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 ++ V++ DDH LVR G++ IL+ GI V+G A GE+AV+ CR DV LMD+SMP Sbjct: 4 LVTVVIADDHALVREGLKTILKSQSGISVLGMAENGEEAVRLCRRLNPDVALMDLSMPIK 63 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G++A ++++ K + LT H E + AGA+GY+ K ++ +E+V AI +V Sbjct: 64 SGVQAIQELSGEG-KTKFLALTAHVEPDHIYSALDAGASGYVLKTSSSKELVMAIETVMQ 122 Query: 121 GQRYIASDIAQQMALSQIEPEKTES--PFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 G+ Y+A DI+ ++A ++ +++ S SL+ERE +++ + G K EI++ L +S Sbjct: 123 GKVYLAPDISAEVAKGFLQRDRSNSCDSLESLTEREREVLKQVLAGYKNREIADLLVISV 182 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHL 203 KTV +R KL + EL Sbjct: 183 KTVEKHRSNFMKKLGLRSKAELKAY 207 >UniRef50_B9XAM6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=B9XAM6_9BACT Length = 209 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 116/210 (55%), Gaps = 8/210 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +L+ DDH +VR G+ ++ ++VV EA+ G A++ D+ LMD+ MP Sbjct: 7 IRILIADDHYVVRMGLIALVNTEPDMEVVAEAADGAQALELFAKCNPDLALMDLRMPVKS 66 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++AT +I A ++MLT + K +QAGA GY+ K + ++++ A+R+V +G Sbjct: 67 GVQATLEIRNRFATACVLMLTAFDGDEDIHKALQAGAQGYVLKSSTGEKLIPALRAVAAG 126 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 QR+I ++A ++AL + F LS RE+Q++ + +G EI++ LN++ T Sbjct: 127 QRWIPKEVANRLALR--------NSFEQLSPREVQVLSELARGLANKEIADVLNITEHTT 178 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 + + +KL + E +A++ G+ + Sbjct: 179 KDHLKSILAKLRVADRTEAVTVALQRGIIH 208 >UniRef50_D1BCA8 Two component transcriptional regulator, LuxR family n=18 Tax=Bacteria RepID=D1BCA8_SANKS Length = 234 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 108/210 (51%), Gaps = 6/210 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + V++ DDH +VRAGI +L I+VVGEA G AV RT + DVV+ D+ MP + Sbjct: 29 VRVVVADDHPVVRAGIVGMLGVESDIEVVGEAEDGRQAVDLARTLSPDVVITDLRMPVLD 88 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ ATR+I V++++LT + + + ++AGA GYL K E+V+ IR G Sbjct: 89 GVGATREIVALPGTVRVVVLTTYETDGEILRAVEAGATGYLLKDTPRAELVAGIREAARG 148 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Q + +A ++ + S L+ RE++++ + +G + +L +S TV Sbjct: 149 QTVLTPSVATRLV------SQVGSRADRLTPREVEVLRAVARGLSNAAVGHELFISETTV 202 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++ R F KL ++ +A GL Sbjct: 203 KTHLIRAFGKLGVNDRTHAVTVATDRGLLG 232 >UniRef50_B4D2X8 Two component transcriptional regulator, LuxR family n=2 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2X8_9BACT Length = 242 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 65/206 (31%), Positives = 115/206 (55%), Gaps = 2/206 (0%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 VLLVDDH +R G+ I+++ + GEAS A++ R D+ ++D+SMPG G Sbjct: 24 RVLLVDDHPAIRRGMAAIIDEEPDLTTCGEASTAPMALEAMRRLNPDIAVIDISMPGTNG 83 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 +E + + ++I+ML++H E+ + ++AGA GY+ KG A + V++ +R V G+ Sbjct: 84 VELIKLMLAEQPGLQILMLSMHDESVYALRALRAGAKGYVMKGEALECVLTGLRKVGEGE 143 Query: 123 RYIASDIAQQMALSQIEP--EKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 Y++ + ++ I+ SP LS+RE +++ ++ +G EI+E+L+LS KT Sbjct: 144 IYVSPKFSDRLIFKTIQSTIAGVASPVDKLSDREFEVLRLLGRGFGSREIAEELSLSVKT 203 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIR 206 V ++R + KL E+ AI Sbjct: 204 VETHRAHIKEKLGFKEAGEMVRFAID 229 >UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeobacter violaceus RepID=Q7NMF3_GLOVI Length = 212 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 65/212 (30%), Positives = 112/212 (52%), Gaps = 3/212 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 M +L+V+DH L+R G+R++L +V GEA+ GE A+ R+ D+VLMD+ +P + Sbjct: 1 MTRILIVEDHALMRIGLRQVLSQTPEYEVAGEAADGEQALALARSLQPDLVLMDLGLPVM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAA--PQEVVSAIRSV 118 G E TR + R ++++ LT H E+ + AGA GY K A +++A+ SV Sbjct: 61 SGTEVTRILKREYPAMRVLALTSHDEDESVFGALAAGADGYCLKATAGIASRLLAAVASV 120 Query: 119 YSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 G ++ DIA ++ + + LSERE++++ +I G EI +L ++ Sbjct: 121 RDGAAWLDPDIADRVLRDLGRIPQAGAD-NPLSEREMEVLKLIADGLTNAEIGRRLYIAS 179 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 TV + + +KL ++ V+ A+R G Sbjct: 180 GTVRVHVSNIIAKLGVNDRVQAAVRALREGWI 211 >UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJD7_9MICO Length = 207 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 118/207 (57%), Gaps = 4/207 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI V LVDDH+LVRAG+R +LE G+ VVGEA G++AV A DVVLMD+SMP + Sbjct: 1 MIRVYLVDDHQLVRAGVRTLLESDPGLSVVGEARDGQEAVAGIDAAASDVVLMDLSMPVM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EATR I + D ++++LT ++ +V+ AGA GY+ K A P ++++A+ + Sbjct: 61 DGVEATRAILSTHPDTRVLVLTSFSDRERVKEVLAAGAIGYVLKDAEPADLLAAVHAAAR 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+ I +A + S P + LS RE Q++ ++ +G +++ L ++ +T Sbjct: 121 GEVPIDPRVAGALLPSAGGPSVAD----RLSPRETQVLRLVAQGLANKQVARALGITERT 176 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRH 207 V ++ R+F ++ + A H Sbjct: 177 VKAHLGRVFREIGVLDRTSAALWARDH 203 >UniRef50_C4RJ91 Two-component system response regulator n=2 Tax=Actinomycetales RepID=C4RJ91_9ACTO Length = 232 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 70/221 (31%), Positives = 112/221 (50%), Gaps = 10/221 (4%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI L+VDD LVRAGIR +L+ I+VVGEA+ G +AV+ DVVLMD+ MP + Sbjct: 1 MIRALVVDDQGLVRAGIRVLLDTAPDIEVVGEAADGHNAVRLVERLRPDVVLMDIRMPRV 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EATR++ + +++LT ++ + AGA GYL K P +++ A+R Sbjct: 61 DGIEATRRLLAAAPLTNVLILTTFADDDSVYGALSAGAVGYLVKDGEPADMLDAVRRAAR 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESP----------FASLSERELQIMLMITKGQKVNEI 170 G+ +A + ++ + A+L+ RE ++ ++ G EI Sbjct: 121 GEPLLAPSVLARVVDRARRSHAADRNGDIEQPDTAVLAALTARERDVLSLVGVGLSNAEI 180 Query: 171 SEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 + LN+ TV ++ + KL I V+ LA R GL + Sbjct: 181 ARDLNVGVTTVKTHIVALLEKLGIRNRVQAGILAHRLGLVD 221 >UniRef50_P94439 Uncharacterized transcriptional regulatory protein yfiK n=4 Tax=Bacillales RepID=YFIK_BACSU Length = 220 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 62/216 (28%), Positives = 117/216 (54%), Gaps = 8/216 (3%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +++ DD ++VR G+ +L+ + + V+ A G++A + + D+VLMD+ MP Sbjct: 1 MIKIIITDDQDIVREGLASLLQLREELDVIATARNGQEAFEKAKELEPDIVLMDIRMPVS 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+E T+ I S VK++MLT ++ L A+ ++ GA+GYL K + +V A+ +V+S Sbjct: 61 NGVEGTKLITSSLPSVKVLMLTTFKDSALIAEALEEGASGYLLKDMSADTIVKAVMTVHS 120 Query: 121 GQRYIASDIAQQMA--------LSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISE 172 G + ++ QM L I + + L+ERE++++ + G EI+E Sbjct: 121 GGMVLPPELTAQMLNEWKREKQLKGINEIEKPNELLDLTEREIEVLAELGYGLNNKEIAE 180 Query: 173 QLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHG 208 +L ++ TV ++ + SKL + + ++R+G Sbjct: 181 KLYITEGTVKNHVSNIISKLAVRDRTQAAIYSVRYG 216 >UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QGZ7_9SPHI Length = 218 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 68/218 (31%), Positives = 126/218 (57%), Gaps = 12/218 (5%) Query: 5 LLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVD------VVLMDMSMP 58 +LVDDH +VR GIR +LE G++++ EA+ GE+ + + D ++LMD+S+P Sbjct: 1 MLVDDHSIVRDGIRLLLEQADGLEIIDEANDGEEVLDKLKVLQPDPSLLPDLILMDISLP 60 Query: 59 GIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSV 118 G+ G++ T+ I+R +V+++ML++H + ++AGA GY+ K ++ E++ AIR++ Sbjct: 61 GMSGIQTTQVISRLYKNVRVLMLSMHNNEDYILRSVEAGAYGYILKDSSSDEMIKAIRTI 120 Query: 119 YSGQRYIASDIAQQMALSQIEPEKTESPF------ASLSERELQIMLMITKGQKVNEISE 172 SG++Y +S +A + ++ K + LS +E +I+ + G EI+E Sbjct: 121 ASGEKYYSSPVASIILSGYMQQLKKGDRHGRAERQSKLSNKEKEILQFLVDGMSSREIAE 180 Query: 173 QLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 +L LS +TV+++R M +L + EL +A+ L Sbjct: 181 KLQLSVRTVDNHRANMMRRLQVRNAAELVRMAVEDKLI 218 >UniRef50_C7R398 Two component transcriptional regulator, LuxR family n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R398_JONDD Length = 230 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 69/210 (32%), Positives = 108/210 (51%), Gaps = 9/210 (4%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 +++VDD LVRAG+R IL GI VV E + GE+AV + DVVLMD+ MP G Sbjct: 10 RIIIVDDDALVRAGLRMILGGDPGITVVAEGTHGEEAVSLYAAHQPDVVLMDIRMPVRDG 69 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 L AT+ I +++LT + K ++AGA G+L K +P ++V A+ G Sbjct: 70 LSATKDIVTRWPHANVLVLTTFDTDEFIVKALRAGARGFLLKDTSPPDLVRAVNLAGDGH 129 Query: 123 RYIASDIAQQMALSQIE------PEKTESPFASLSERELQIMLMITKGQKVNEISEQLNL 176 ++ + Q+ E + L+EREL + I +G+ EIS+ L + Sbjct: 130 PTLSPSVTAQLIAKVSEEPDTGRQRQARRMVEQLTERELDVAQQIAQGKSNQEISQTLYM 189 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIR 206 S TV ++ R+F+K ++ V+ +AIR Sbjct: 190 SIPTVKTHISRIFTKFDVDNRVQ---IAIR 216 >UniRef50_C1B8T3 NarL family two-component response regulator n=61 Tax=Bacteria RepID=C1B8T3_RHOOB Length = 276 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 72/209 (34%), Positives = 113/209 (54%), Gaps = 7/209 (3%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSM-PG 59 MI +LL DDH +VRAG+R +LE I+VVGEA+ + AV C T VD+VLMD+ PG Sbjct: 1 MIRLLLADDHAIVRAGLRALLEHEDDIEVVGEAATADAAVALCATTPVDLVLMDLRFGPG 60 Query: 60 IGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVY 119 G++ATR + ++++T + + + AGAAGYL K P E+++A+R+ Sbjct: 61 TSGVDATRNLRSLPNPPHVLVVTNYDTDADILDAVAAGAAGYLLKDTPPPELLAAVRAAS 120 Query: 120 SGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 +G ++ +A ++ P SLS RE+Q++ ++ G+ EI ++L LS Sbjct: 121 AGDSVLSPAVASKLMTRVRRPA------TSLSPREIQVLTLVAAGRSNREIGKELFLSET 174 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHG 208 TV S+ +F KL + R G Sbjct: 175 TVKSHLVHIFGKLGVKSRTSANRAGPRAG 203 >UniRef50_D1B9T1 Two component transcriptional regulator, LuxR family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9T1_THEAS Length = 227 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 58/210 (27%), Positives = 107/210 (50%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I ++L DDH L R G+RR+LE K ++V+GEA G+ V+ DV+L D+ MP Sbjct: 4 IRIVLADDHRLFRDGLRRLLEMEKDMEVIGEAEDGDATVEMVSALKPDVLLFDIHMPKKD 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++ + + + + +T ++ + G Y+ K + E++SAIRSVY G Sbjct: 64 GIQVVKDLKAMGCSPRFVAITAFDDDDHITALSSVGIDAYVLKASGMAELLSAIRSVYRG 123 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Y+ +A ++ + + + L+ RE++++ I++G EI+ ++ LS KTV Sbjct: 124 HSYVDPKVAGKLLSTFNRRREERDLLSRLTPREMEVLYWISQGLNNGEIARKMVLSEKTV 183 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++ + KL++ + A + GL Sbjct: 184 KNHVSHILKKLDLVDRTQAAVFAWKRGLAQ 213 >UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator receiver n=32 Tax=Betaproteobacteria RepID=Q46VQ7_RALEJ Length = 231 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 111/209 (53%), Gaps = 8/209 (3%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRT----NAVDVVLMDMSMP 58 VLL+DDH LVR G+R L + VVGEA GE A+ W D+V+ D+ M Sbjct: 20 RVLLIDDHALVRDGMRMHLTLQPDLYVVGEADGGEAALAWLERAGARERPDLVITDIGMR 79 Query: 59 GIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSV 118 G+GG+ T + ++ ++++++H + ++AGA GY+ K A E+++AI +V Sbjct: 80 GMGGIALTAALHEQYPEIAVLVVSMHDNLEYARQAVRAGARGYVLKDAPADELMAAIEAV 139 Query: 119 YSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 +G+ + ++ IA+ MA E P +L+ RE I+ I +G EI+ QL +S Sbjct: 140 LAGRVFYSARIARGMA----EQMPATGPLDALTRRERDILGCIGRGMANKEIATQLGVSV 195 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRH 207 +TV ++R + KL I G L A+ Sbjct: 196 RTVETHRLNLKRKLGIEGRAGLVKYAVEQ 224 >UniRef50_D2PZN7 Two component transcriptional regulator, LuxR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PZN7_9ACTO Length = 242 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 64/219 (29%), Positives = 115/219 (52%), Gaps = 9/219 (4%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + V+L DD L+R R +L+ I VVGEA GE+AV R DVV+MD+ MPG+ Sbjct: 16 LRVVLADDQALLRGAFRTLLDSTDDIAVVGEAGDGEEAVALTRRTHPDVVVMDIQMPGMD 75 Query: 62 GLEATRKIARSTADV---KIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSV 118 GL AT +I D+ ++++LT + + A+ ++AGA+G++ KG ++ A+R++ Sbjct: 76 GLTATAQICA-DPDLRASRVLILTTYETDEYVAQALRAGASGFIGKGIDADGLIDAVRTI 134 Query: 119 YSGQRYIASDIAQQMALSQIEPEKTESP-----FASLSERELQIMLMITKGQKVNEISEQ 173 G ++ + + + +P +L+ RE +++ ++ G EI+++ Sbjct: 135 ADGDALLSPAATRSLVARFLATPVDTAPRDVERLVALTPREREMVALVATGLSNLEIADR 194 Query: 174 LNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 + +SP TV ++ R +KL +L +A R GL Sbjct: 195 MYVSPFTVRAHVQRAMTKLEARDRAQLVAIAYRTGLARG 233 >UniRef50_C0GJ72 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ72_9FIRM Length = 212 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 67/206 (32%), Positives = 114/206 (55%), Gaps = 2/206 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V+LVDDH +VR G+R +LE ++V GEA AV C A DV+L+D +P Sbjct: 5 IKVMLVDDHSVVRQGLRLLLELDDTMEVCGEAETLTGAVAVCAEVAPDVILLDFKLPDGD 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ + R VKII+LT + ++ L + ++AGA GYL K +E+++ I++V+ G Sbjct: 65 GIIGCGNLKRQFPQVKIIILTAYADDHLVTETIKAGADGYLLKNVESEELINTIQAVHKG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Q + + + + + + + +L+ +E+QI+ MI+ G+ EI+E + +S KTV Sbjct: 125 QSVLDPSVTEILFDNIKSQQPKKE--HNLTPKEVQILDMISVGKANKEIAEIMKISDKTV 182 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRH 207 +Y + KLN+ E +R+ Sbjct: 183 RNYVSNILQKLNVSNRTEAASYWMRN 208 >UniRef50_D1BXU0 Two component transcriptional regulator, LuxR family n=3 Tax=Actinomycetales RepID=D1BXU0_XYLCX Length = 223 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 60/218 (27%), Positives = 110/218 (50%), Gaps = 7/218 (3%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VL+ DD LVRAG+ ++ ++VVGEA G A+ + D+ +D+ MPG+ Sbjct: 1 MIRVLIADDQPLVRAGLTALVNLEPDLEVVGEAGDGVTALAMAQDLRPDIACLDIRMPGL 60 Query: 61 GGLEATRKIA--RSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSV 118 G+ R++ A + +++LT + ++AG +G+L K A P+ + +AIR V Sbjct: 61 DGIAVARRLCGPDVEAPIPVLVLTTFDLDDYVFGALEAGVSGFLLKDAEPETITTAIRQV 120 Query: 119 YSGQRYIASDIAQQMA-----LSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQ 173 +G I + +++ ++P T L+ RE +I+L++ +G +EI+ Sbjct: 121 AAGNGTIDQTLTRRILREFVQRRSLQPVSTSRGNGVLTSREQEILLLLAQGMSNDEIART 180 Query: 174 LNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 L + TV S+ RM KL + ++ A ++ + Sbjct: 181 LVVELSTVKSHLARMLPKLGVRSRLQAVVWAYQNRFVD 218 >UniRef50_A1TVD4 Two component transcriptional regulator, LuxR family n=9 Tax=Burkholderiales RepID=A1TVD4_ACIAC Length = 209 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 80/210 (38%), Positives = 134/210 (63%), Gaps = 1/210 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI+V+L DDH ++R GIR L + I+V GEA + + R DV+L+D++MPG Sbjct: 1 MIHVVLCDDHAVLRRGIRDTLTEAPDIQVTGEAGGYSELREILRKAPCDVLLLDLNMPGR 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GLE + + + +K+++++++ E+ + ++AGA GY +K P E++ A+R+V Sbjct: 61 SGLEVLSSLKETDSAIKVLVVSMYPEDQYALRCLRAGAQGYANKAGDPMELIEAVRTVMK 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G++Y+ ++AQ +A S +P E P +LSERELQ ++ I G+++++I+E+L LSPKT Sbjct: 121 GRKYLTPEVAQMLADSLAQPAP-ELPHEALSERELQTLVKIASGKRLSDIAEELMLSPKT 179 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 V+ YR R+ KL + + ELT AIR+ L Sbjct: 180 VSVYRSRVLEKLKLSNNAELTVYAIRNQLV 209 >UniRef50_A9U6E4 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U6E4_PHYPA Length = 563 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 7/206 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +L+VDDH ++R +R +LE+ + +VVG A GE A++ CR +VLMD+ MP + Sbjct: 358 IRLLVVDDHPVIRESLRTLLEEQQDFQVVGTAEDGEQAIELCRQLRPQLVLMDVDMPIVD 417 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ A+R I S ++I++LT + + +++G GYL K P E+ IR+V+ G Sbjct: 418 GISASRTIKESWPHIRILILTTFEDTKQALEALRSGVDGYLLKSMQPLELAETIRTVHRG 477 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFA-------SLSERELQIMLMITKGQKVNEISEQL 174 I ++ ++ + P + L+ REL+I+ ++KG + I+ Sbjct: 478 GTLIEQGMSHKLFAQLEADNSGDDPSSIKASSAYDLTPRELEILQFVSKGLRYKSIASNF 537 Query: 175 NLSPKTVNSYRYRMFSKLNIHGDVEL 200 LS TV +Y + KL + E Sbjct: 538 YLSDGTVRNYASSAYLKLGVRNREEA 563 >UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXM6_EIKCO Length = 215 Score = 253 bits (647), Expect = 3e-66, Method: Composition-based stats. Identities = 66/213 (30%), Positives = 108/213 (50%), Gaps = 3/213 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +LLVDDH L R G+ +L G ++V EA+ G + VK R + D+VL+D+ MP + Sbjct: 6 IRILLVDDHPLFRRGLSFLLAQEYGFEIVAEATDGLEGVKLARFHRPDLVLLDVEMPVMN 65 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G EA ++ + ++MLT+ + K ++ GA GY+ K A +V AIR +G Sbjct: 66 GPEALAQMLDFQPGLPVLMLTISEDADNLKKCLELGARGYILKNADTDFLVEAIRQAVAG 125 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Q+ ++ ++ Q P + + SL++RE ++ + G I+ ++ LS TV Sbjct: 126 QQTVSPEMNNA---GQSIPPEHSAILDSLTQRERDVLRYVAGGISNKMIARRMFLSENTV 182 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 ++ +F KLNI V A GL E Sbjct: 183 KAHMQNIFRKLNIDNRVRAAVYARELGLDKEEE 215 >UniRef50_A5FIE9 Two component transcriptional regulator, LuxR family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FIE9_FLAJ1 Length = 213 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 123/210 (58%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 IN+L+ DDH + GI +LE I ++ +A G +A++ + VD +++D+SMP + Sbjct: 4 INLLIADDHTMFLQGIISLLEQEPNITIIDKAVNGIEALEIIKKGVVDFIILDISMPEMD 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+E ++ + + +VKI++++ H+ + +++++ G GYL K AA +E++ AI ++ SG Sbjct: 64 GIELSKILKKQHPNVKILIVSTHSNVMIVSRLIRIGVNGYLLKNAAKEELLKAINTIASG 123 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + Y A ++ ++ + + EK S LS RE +I+++I EI+E+ +S TV Sbjct: 124 ENYFAEELEEKHLSNSSKIEKQVSNLTELSSREKEILVLIAHEYNTAEIAEKTFISLNTV 183 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 N++R + SKLN L A+ +GL + Sbjct: 184 NTHRRNLLSKLNAKNTAGLVKYAVENGLVD 213 >UniRef50_C6WIC9 Two component transcriptional regulator, LuxR family n=31 Tax=Actinobacteria (class) RepID=C6WIC9_ACTMD Length = 302 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 62/214 (28%), Positives = 113/214 (52%), Gaps = 4/214 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V++ DD L+R ++ ++V+G A GE AV DVVLMD+ MP + Sbjct: 71 IGVVIADDQALLRGSFEVLVGSAPDLRVLGTAEDGERAVAVAARVRPDVVLMDVRMPNVD 130 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EAT +I + A V++++LT + ++AGA+G+L K P ++++AIR V SG Sbjct: 131 GIEATARICAAQAGVRVLILTTFDLDEYVYAALRAGASGFLLKDTPPADLLAAIRVVASG 190 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASL---SERELQIMLMITKGQKVNEISEQLNLSP 178 + ++ + +++ ++ P +L + RE +++ ++ +G EI+E L++S Sbjct: 191 EALLSPSVTRRLI-TEFAARPAARPLPALDAVTAREREVLRLVAEGLSNTEITEALHVSR 249 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 T+ ++ R+ KL +L A GL A Sbjct: 250 GTLKTHVGRLLHKLGARDRAQLVIAAYESGLVTA 283 >UniRef50_B6A2W0 Two component transcriptional regulator, LuxR family n=47 Tax=Proteobacteria RepID=B6A2W0_RHILW Length = 223 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 64/211 (30%), Positives = 108/211 (51%), Gaps = 5/211 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLL+D+H LV G++ +LE I+V G A + + R VVLMD++MP + Sbjct: 7 IRVLLIDNHPLVLDGLKAVLETFDHIEVAGTAGLAQTGLDIARQIQPQVVLMDINMPKLS 66 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++A +++++ML++H + + GAAGY+ K + E+V+AI +V G Sbjct: 67 GIDAIELFRNEFPEIRVVMLSMHDSREYISSSVMHGAAGYVLKDVSTDEIVAAIETVADG 126 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Y +S + + E+ E L+ RE I+ +I G+ EI+E L +S T Sbjct: 127 GTYFSSGVFDALM-----GERAEEGSDPLTPREHDILGLIVAGRSNREIAEVLGISSATA 181 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 ++R + KL I L A+ HG+ ++ Sbjct: 182 ETHRKNLKKKLGIATTAGLIRYALDHGIASS 212 >UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8B3_9BACT Length = 212 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 68/214 (31%), Positives = 113/214 (52%), Gaps = 7/214 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V+L DDH L R G++ LE + + +VGEA+ G++A K DV L+D+ MPG Sbjct: 4 IRVILADDHPLTRQGLKAYLEREENVALVGEAADGDEAWKLIEELKPDVALLDIRMPGAD 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ R+I + V IMLT + ++AGA G++ K + ++ AI++V +G Sbjct: 64 GITLARRIKENKLPVAAIMLTSYDSQQYVLASLKAGAKGFVLKTTSAGALMKAIQTVATG 123 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 ++ S++A + E +LS RE +++L +G E++ QL +S +TV Sbjct: 124 SLFLDSEVASVV-------GAQEELTEALSPREREVLLCAARGLSSKEVAAQLYISERTV 176 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETL 215 ++ ++ KL H E LA++HGL E L Sbjct: 177 QTHLASVYDKLGAHNKTEAMLLALKHGLMTLEEL 210 >UniRef50_B2KBW2 Two component transcriptional regulator, LuxR family n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBW2_ELUMP Length = 215 Score = 252 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 68/214 (31%), Positives = 125/214 (58%), Gaps = 3/214 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIK-GIKVVGEASCGEDAVKWCRTNA-VDVVLMDMSMP 58 MI +LL DDH LVR GI+ ILE I VV E G++ + + N +DV ++D++MP Sbjct: 1 MIRILLADDHALVRDGIKSILERKGKNISVVAEMGNGKEMLDYAVKNKNIDVYVVDIAMP 60 Query: 59 GIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSV 118 + G+ A +K+ + D K+I+L+++ + K +AGA G++ K ++ E++ AI+ V Sbjct: 61 ILNGIAAVQKLLKINPDAKVIVLSMYDDRASVEKAFKAGARGFVVKVSSADEIIEAIKEV 120 Query: 119 YSGQRYIASDIAQQMALSQI-EPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 +G+ Y+ S +++ + + + ++ + L+ +E QI+ +I +G EI+++ LS Sbjct: 121 SAGRFYLCSKVSKFVVQGFLGKASPSKKDPSGLTPKEKQILQLIAEGFSSKEIAKEFGLS 180 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 TV+ +R + KL+IH EL AI+ G+ + Sbjct: 181 LNTVHVHRNNIMRKLDIHKQAELVRYAIKEGIAH 214 >UniRef50_A6W0B9 Two component transcriptional regulator, LuxR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W0B9_MARMS Length = 213 Score = 252 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 101/211 (47%), Positives = 145/211 (68%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 M+ VL+VDDH++V GI R+L+D+KG++VVG GE+A+ + D++LMD+ MPGI Sbjct: 1 MLKVLIVDDHDVVSQGISRVLQDVKGVEVVGVVHSGEEAIIQSKILLPDIILMDVHMPGI 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GGL AT++I R KII L+ +N P K+++AGA+GYL+KG E++ AI+ V Sbjct: 61 GGLGATKEIKRILPKTKIIALSALDDNLYPVKLLEAGASGYLTKGTNTSELLEAIQMVSK 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+ YI+ IAQ+MALS+ + SP LS+RELQ+ MI +K NEI+E L +SPKT Sbjct: 121 GEHYISKSIAQKMALSKFSIDGQGSPLGQLSDRELQVAQMIVDCKKSNEIAEHLCVSPKT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V++YR R+F+KLNI DVEL LA+R+ + Sbjct: 181 VSTYRTRIFTKLNIESDVELIRLAVRYNVLG 211 >UniRef50_A6BYP5 Response regulator receiver domain protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BYP5_9PLAN Length = 221 Score = 252 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 68/206 (33%), Positives = 122/206 (59%), Gaps = 2/206 (0%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 V++VDDH +VR G R++E ++V GEA DA++ N D++++D+S+ G Sbjct: 10 KVMIVDDHPIVREGYSRLIEHQDDLQVCGEADSKVDAIRKIMENPPDLIIVDISLKDGSG 69 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 LE + + + +K++ +++H E + ++AGA GY++K AP++++ AI V G+ Sbjct: 70 LELIKDVKAQFSQIKMLTVSMHDETLFAERSLRAGALGYVNKQQAPEQLIKAIYQVLKGK 129 Query: 123 RYIASDIAQQMALSQIEPEK--TESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 Y+++ + ++M I + +SP SLS+REL++ I +G+ I+++LNLS KT Sbjct: 130 VYLSAAVTERMICRSIGSDNYSDQSPIESLSDRELEVFEQIGEGETTRSIAQKLNLSSKT 189 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIR 206 V +YR + KLN+ LT AI+ Sbjct: 190 VETYRENIKHKLNLENATALTRHAIQ 215 >UniRef50_C2RNB5 Two-component protein Kinase n=1 Tax=Bacillus cereus BDRD-ST24 RepID=C2RNB5_BACCE Length = 304 Score = 252 bits (645), Expect = 6e-66, Method: Composition-based stats. Identities = 64/214 (29%), Positives = 113/214 (52%), Gaps = 4/214 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I + +VDDH +R + IL ++ ++VVG A GE A++ C DVVLMD+ MP + Sbjct: 91 IRLCIVDDHSFIRESLHTILSGLEDLQVVGMAEDGEQALELCGRLKPDVVLMDLEMPNLD 150 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ AT+ I + ++++++L+ ++++ GA GY+ K +E+ +IR VY G Sbjct: 151 GIHATKMIKKRWPEIRVLILSTFQNTERAKEIIRNGADGYVLKSIDSRELAESIRLVYRG 210 Query: 122 QRYIASDIAQQMALSQIEP----EKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 I D+ +M E +++ LS+REL+I+ ++++G + I+ L LS Sbjct: 211 GAMITHDLFHRMWEENKETGLFESRSDGIEYGLSKRELEILELLSQGSRYKTIASTLYLS 270 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 TV +Y ++ KL + E A GL + Sbjct: 271 NGTVRNYASNLYEKLGVKNREEAVQKAKDIGLLS 304 >UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C48EF Length = 220 Score = 252 bits (645), Expect = 6e-66, Method: Composition-based stats. Identities = 61/210 (29%), Positives = 107/210 (50%), Gaps = 5/210 (2%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 ++L DDH ++R G+R ++ ++VVGEA+ G + V R V+ +D+SMPG G Sbjct: 5 RIVLADDHVILREGLRALISAQPDLEVVGEAASGTETVDCVRATEPRVLCLDLSMPGWGS 64 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 ++ + ++++LT+H + + AGAAGY K ++++AIR+V +G Sbjct: 65 ATTITRVTQLAPRTRVLVLTMHNDPAYVRSALAAGAAGYFLKTTPSPDLLAAIRAVATGA 124 Query: 123 RYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVN 182 R I + + + + LS RE +++ ++ KG EI++QL LS KTV Sbjct: 125 RVIDPALGDVL-----GGPPPPAERSQLSRRETEVLELLVKGLTHQEIADQLFLSVKTVE 179 Query: 183 SYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 +YR R+ K + + + GL A Sbjct: 180 TYRARLREKTGLKTRADYVRYGLEAGLLGA 209 >UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paenibacillaceae RepID=C0ZBD9_BREBN Length = 215 Score = 252 bits (645), Expect = 7e-66, Method: Composition-based stats. Identities = 64/209 (30%), Positives = 113/209 (54%), Gaps = 1/209 (0%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 VL+ DDH + R IR +L+ +V+GEA GE+A C D+VLMD++MP G Sbjct: 5 RVLIADDHPMARMAIRSLLDPDPSFEVIGEAQNGEEAFLLCGQIQPDLVLMDINMPKWSG 64 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 LEATR++ ++ +K+++L+V + +Q GA GYL K P + ++ + ++ Sbjct: 65 LEATREVKKAYPHIKVVILSVSDDVADLITAIQFGAQGYLLKNLEPDDWINYLHALLGED 124 Query: 123 RYIASDIAQQMALSQIEPEKTESPFAS-LSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + ++A ++ + E T+ + L+ RE +I++ + G+ EISE L ++ TV Sbjct: 125 SELTREMATRLMYRFRQEEATDEMVPAVLTPREREIVMYVGAGKTNREISEALIIAENTV 184 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 ++ + KL + V+L A+RH L Sbjct: 185 KNHLKNILEKLQLANRVQLAAYAVRHHLV 213 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas... 307 2e-82 UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 305 8e-82 UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC... 305 9e-82 UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR fa... 302 8e-81 UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus... 295 6e-79 UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=... 294 1e-78 UniRef50_A8MF72 Two component transcriptional regulator, LuxR fa... 293 3e-78 UniRef50_A0LVS2 Two component transcriptional regulator, LuxR fa... 292 8e-78 UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=... 291 1e-77 UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Ta... 290 2e-77 UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti... 290 2e-77 UniRef50_A4J6C2 Two component transcriptional regulator, LuxR fa... 288 6e-77 UniRef50_C8WSR5 Two component transcriptional regulator, LuxR fa... 288 7e-77 UniRef50_C7MUJ2 Response regulator containing a CheY-like receiv... 288 8e-77 UniRef50_C7MN84 Response regulator containing a CheY-like receiv... 287 2e-76 UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillac... 285 6e-76 UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR fa... 285 9e-76 UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR fa... 284 1e-75 UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=... 284 1e-75 UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ... 284 2e-75 UniRef50_B0C955 Two-component transcriptional regulator, LuxR fa... 284 2e-75 UniRef50_B2A8K6 Two component transcriptional regulator, LuxR fa... 283 3e-75 UniRef50_C7RBI1 Two component transcriptional regulator, LuxR fa... 283 3e-75 UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Ac... 283 3e-75 UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut... 283 3e-75 UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa... 283 4e-75 UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax... 283 4e-75 UniRef50_D1VBH1 Two component transcriptional regulator, LuxR fa... 282 5e-75 UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR fa... 282 7e-75 UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa... 282 8e-75 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 282 8e-75 UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr... 282 9e-75 UniRef50_D1C1C8 Two component transcriptional regulator, LuxR fa... 281 1e-74 UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteri... 281 1e-74 UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobact... 281 1e-74 UniRef50_D1XHI5 Two component transcriptional regulator, LuxR fa... 281 1e-74 UniRef50_C6BTX3 Two component transcriptional regulator, LuxR fa... 281 1e-74 UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR fa... 281 1e-74 UniRef50_A0K2I9 Two component transcriptional regulator, LuxR fa... 280 2e-74 UniRef50_B2J2N1 Two component transcriptional regulator, LuxR fa... 280 2e-74 UniRef50_D1AAU8 Two component transcriptional regulator, LuxR fa... 280 2e-74 UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa... 280 2e-74 UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR fa... 280 2e-74 UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa... 280 3e-74 UniRef50_C1TQ52 Response regulator containing a CheY-like receiv... 280 3e-74 UniRef50_A9AX03 Two component transcriptional regulator, LuxR fa... 280 3e-74 UniRef50_A5V148 Two component transcriptional regulator, LuxR fa... 279 4e-74 UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa... 279 4e-74 UniRef50_C0WKL5 Response regulator n=6 Tax=Corynebacterium RepID... 279 6e-74 UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa... 278 6e-74 UniRef50_O07528 Uncharacterized transcriptional regulatory prote... 278 7e-74 UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa... 278 8e-74 UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteri... 278 9e-74 UniRef50_P55184 Uncharacterized transcriptional regulatory prote... 278 9e-74 UniRef50_A3Y699 Putative two component system response regulator... 278 1e-73 UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=... 277 2e-73 UniRef50_B5JFN7 Response regulator receiver domain protein n=1 T... 277 2e-73 UniRef50_B8FDP3 Two component transcriptional regulator, LuxR fa... 277 2e-73 UniRef50_B8GAC9 Two component transcriptional regulator, LuxR fa... 277 3e-73 UniRef50_B9XC41 Two component transcriptional regulator, LuxR fa... 276 3e-73 UniRef50_D1C6S1 Two component transcriptional regulator, LuxR fa... 276 3e-73 UniRef50_A9B5L0 Two component transcriptional regulator, LuxR fa... 275 5e-73 UniRef50_B9XL75 Two component transcriptional regulator, LuxR fa... 275 6e-73 UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID... 275 6e-73 UniRef50_B8FX94 Two component transcriptional regulator, LuxR fa... 275 7e-73 UniRef50_B4CWX5 Two component transcriptional regulator, LuxR fa... 275 7e-73 UniRef50_Q15T22 Two component transcriptional regulator, LuxR fa... 275 8e-73 UniRef50_A7NP18 Two component transcriptional regulator, LuxR fa... 275 8e-73 UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 ... 275 8e-73 UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa... 275 1e-72 UniRef50_D0LYS4 Two component transcriptional regulator, LuxR fa... 275 1e-72 UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR fa... 274 1e-72 UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=... 274 2e-72 UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR fa... 274 2e-72 UniRef50_C7MLQ9 Response regulator containing a CheY-like receiv... 274 2e-72 UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR fa... 274 2e-72 UniRef50_A3CKH3 Two-component system transcriptional regulator (... 273 2e-72 UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR fa... 273 2e-72 UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides... 273 2e-72 UniRef50_B0C756 Two-component transcriptional regulator, LuxR fa... 273 3e-72 UniRef50_A5G586 Two component transcriptional regulator, LuxR fa... 273 3e-72 UniRef50_B1Y743 Two component transcriptional regulator, LuxR fa... 273 3e-72 UniRef50_Q52376 Response regulator gacA n=286 Tax=Gammaproteobac... 273 4e-72 UniRef50_B8G137 Two component transcriptional regulator, LuxR fa... 273 4e-72 UniRef50_A4VZN8 Response regulator containing a CheY-like receiv... 272 4e-72 UniRef50_Q1AST2 Two component transcriptional regulator, LuxR fa... 272 4e-72 UniRef50_C6D0G6 Two component transcriptional regulator, LuxR fa... 272 5e-72 UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V... 272 5e-72 UniRef50_UPI0001B502C9 two component LuxR family transcriptional... 272 6e-72 UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family prot... 272 7e-72 UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus... 272 8e-72 UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiob... 272 8e-72 UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. ora... 272 8e-72 UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa... 272 8e-72 UniRef50_C3JVF4 Two component transcriptional regulator, LuxR fa... 272 8e-72 UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacill... 272 8e-72 UniRef50_D1BX47 Two component transcriptional regulator, LuxR fa... 271 1e-71 UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR fa... 271 1e-71 UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium ... 271 1e-71 UniRef50_B2J8J5 Two component transcriptional regulator, LuxR fa... 271 1e-71 UniRef50_C1A9U5 NarL family two-component response regulator n=1... 271 1e-71 UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 ... 271 1e-71 UniRef50_Q5WI37 Two-component response regulator n=5 Tax=Bacilla... 271 2e-71 UniRef50_C4DCK3 Response regulator containing a CheY-like receiv... 270 2e-71 UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Baci... 270 2e-71 UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR fa... 270 3e-71 UniRef50_B1ZY58 Two component transcriptional regulator, LuxR fa... 270 3e-71 UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsoni... 270 3e-71 UniRef50_C5VAN3 Two component transcriptional regulator, LuxR fa... 269 4e-71 UniRef50_C5C7H0 Response regulator containing a CheY-like receiv... 269 5e-71 UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistip... 269 5e-71 UniRef50_C4ZEG3 Two-component response regulator (Extracellular ... 269 6e-71 UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomyceta... 268 7e-71 UniRef50_B1M5J4 Two component transcriptional regulator, LuxR fa... 268 8e-71 UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmic... 268 8e-71 UniRef50_A5URU4 Two component transcriptional regulator, LuxR fa... 268 8e-71 UniRef50_C1RMQ2 Response regulator containing a CheY-like receiv... 268 9e-71 UniRef50_A4FAA4 Two component system response regulator n=2 Tax=... 268 1e-70 UniRef50_Q1H354 Two component transcriptional regulator, LuxR fa... 268 1e-70 UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR fa... 268 1e-70 UniRef50_D1BGN7 Response regulator containing a CheY-like receiv... 268 1e-70 UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa... 268 1e-70 UniRef50_A1WT06 Two component transcriptional regulator, LuxR fa... 267 2e-70 UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR fa... 267 2e-70 UniRef50_Q04VJ6 Receiver component of a two-component response r... 267 2e-70 UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiob... 267 2e-70 UniRef50_C6XAP6 Two component transcriptional regulator, LuxR fa... 267 2e-70 UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR fa... 267 2e-70 UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 ... 267 2e-70 UniRef50_D1CF52 Two component transcriptional regulator, LuxR fa... 267 2e-70 UniRef50_Q47FR0 Two component transcriptional regulator, LuxR fa... 267 2e-70 UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococc... 267 3e-70 UniRef50_UPI0001789C57 two component transcriptional regulator, ... 267 3e-70 UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Act... 267 3e-70 UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Sele... 266 3e-70 UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 T... 266 4e-70 UniRef50_UPI00018507A5 two component LuxR family transcriptional... 266 4e-70 UniRef50_D1B9T1 Two component transcriptional regulator, LuxR fa... 266 4e-70 UniRef50_Q1QVM5 Two component transcriptional regulator, LuxR fa... 265 5e-70 UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobact... 265 8e-70 UniRef50_C6CZA5 Two component transcriptional regulator, LuxR fa... 265 8e-70 UniRef50_Q024Y7 Two component transcriptional regulator, LuxR fa... 265 8e-70 UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR fa... 265 1e-69 UniRef50_C7MRK0 Response regulator containing a CheY-like receiv... 264 1e-69 UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermop... 264 1e-69 UniRef50_C1TL62 Response regulator containing a CheY-like receiv... 264 1e-69 UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 ... 264 1e-69 UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR fa... 264 2e-69 UniRef50_UPI0001789139 two component transcriptional regulator, ... 264 2e-69 UniRef50_D2Q2Q8 Two component transcriptional regulator, LuxR fa... 264 2e-69 UniRef50_B2A6W2 Two component transcriptional regulator, LuxR fa... 263 2e-69 UniRef50_P94439 Uncharacterized transcriptional regulatory prote... 263 2e-69 UniRef50_A9AZR3 Two component transcriptional regulator, LuxR fa... 263 2e-69 UniRef50_A1K960 Probable transcriptional regulator, LuxR family ... 263 3e-69 UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexac... 263 3e-69 UniRef50_C7NKN7 Response regulator containing a CheY-like receiv... 263 3e-69 UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 ... 263 3e-69 UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi... 263 3e-69 UniRef50_C0N6H7 Response regulator receiver domain protein n=1 T... 263 3e-69 UniRef50_C6E3E1 Two component transcriptional regulator, LuxR fa... 263 4e-69 UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Synt... 263 4e-69 UniRef50_C7QC31 Two component transcriptional regulator, LuxR fa... 263 4e-69 UniRef50_A7HA46 Two component transcriptional regulator, LuxR fa... 263 4e-69 UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeoba... 263 4e-69 UniRef50_A5WFD3 Two component transcriptional regulator, LuxR fa... 262 4e-69 UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 ... 262 4e-69 UniRef50_A1SKW0 Two component transcriptional regulator, LuxR fa... 262 5e-69 UniRef50_C1TL94 Response regulator containing a CheY-like receiv... 262 5e-69 UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromon... 262 5e-69 UniRef50_C4RJ91 Two-component system response regulator n=2 Tax=... 262 5e-69 UniRef50_C7Q058 Two component transcriptional regulator, LuxR fa... 262 6e-69 UniRef50_D1BXU0 Two component transcriptional regulator, LuxR fa... 262 6e-69 UniRef50_B3PFS2 GacA n=1 Tax=Cellvibrio japonicus Ueda107 RepID=... 262 7e-69 UniRef50_C8WS10 Two component transcriptional regulator, LuxR fa... 262 9e-69 UniRef50_C1B8T3 NarL family two-component response regulator n=6... 261 1e-68 UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92... 261 1e-68 UniRef50_D1BCA8 Two component transcriptional regulator, LuxR fa... 261 1e-68 UniRef50_A9VLR5 Two component transcriptional regulator, LuxR fa... 261 2e-68 UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_D2PZY5 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_D1CI66 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_C7R398 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_A0L9F1 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibac... 260 2e-68 UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovib... 260 2e-68 UniRef50_A6M052 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_A8ZMB6 Two-component transcriptional regulator, LuxR fa... 260 3e-68 UniRef50_A9B4P1 Two component transcriptional regulator, LuxR fa... 260 3e-68 UniRef50_B0C7V6 Two-component response regulator n=1 Tax=Acaryoc... 260 3e-68 UniRef50_C6WIC9 Two component transcriptional regulator, LuxR fa... 260 3e-68 UniRef50_A8L3K7 Two component transcriptional regulator, LuxR fa... 260 3e-68 UniRef50_D0LE76 Response regulator receiver n=2 Tax=Actinomyceta... 259 4e-68 UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 T... 259 4e-68 UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 T... 259 4e-68 UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepI... 259 4e-68 UniRef50_Q1LE49 Two component transcriptional regulator, LuxR fa... 259 5e-68 UniRef50_Q67JS2 Two-component response regulator n=1 Tax=Symbiob... 259 5e-68 UniRef50_A6TVR4 Two component transcriptional regulator, LuxR fa... 259 6e-68 UniRef50_D2B5Y0 Response regulator receiver protein n=14 Tax=Act... 259 6e-68 UniRef50_B1KE04 Two component transcriptional regulator, LuxR fa... 258 6e-68 UniRef50_C7RMN3 Two component transcriptional regulator, LuxR fa... 258 6e-68 UniRef50_B4D808 Two component transcriptional regulator, LuxR fa... 258 6e-68 UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ecto... 258 7e-68 UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacilla... 258 7e-68 UniRef50_B9XAM6 Two component transcriptional regulator, LuxR fa... 258 7e-68 UniRef50_Q024A4 Two component transcriptional regulator, LuxR fa... 258 8e-68 UniRef50_C0GJ72 Two component transcriptional regulator, LuxR fa... 258 9e-68 UniRef50_C0Z4M7 Two-component response regulator n=7 Tax=Bacilla... 258 1e-67 UniRef50_A8L345 Two component transcriptional regulator, LuxR fa... 258 1e-67 UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas fl... 258 1e-67 UniRef50_B4D831 Two component transcriptional regulator, LuxR fa... 258 1e-67 UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax... 257 2e-67 UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenel... 257 2e-67 UniRef50_B2JSN3 Two component transcriptional regulator, LuxR fa... 257 2e-67 UniRef50_D2PZN7 Two component transcriptional regulator, LuxR fa... 257 2e-67 UniRef50_C1A730 NarL family two-component response regulator n=1... 257 2e-67 UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, ... 257 2e-67 UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 ... 257 2e-67 UniRef50_D2SFS4 Two component transcriptional regulator, LuxR fa... 256 3e-67 UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paeniba... 256 3e-67 UniRef50_A8LHM9 Two component transcriptional regulator, LuxR fa... 256 3e-67 UniRef50_C5C8Q1 Response regulator containing a CheY-like receiv... 256 3e-67 UniRef50_C1TRD8 Response regulator containing a CheY-like receiv... 256 3e-67 UniRef50_D1V9H6 Two component transcriptional regulator, LuxR fa... 256 3e-67 UniRef50_Q13QW9 Two component transcriptional regulator, LuxR fa... 256 4e-67 UniRef50_UPI0001C314AF two component transcriptional regulator, ... 256 4e-67 UniRef50_Q11YW8 Two component transcriptional regulator, LuxR fa... 256 5e-67 UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga t... 255 5e-67 UniRef50_B4D2I0 Two component transcriptional regulator, LuxR fa... 255 6e-67 UniRef50_C0GF31 Two component transcriptional regulator, LuxR fa... 255 6e-67 UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC... 255 6e-67 UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR fa... 255 6e-67 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 255 6e-67 UniRef50_A2SLK8 Two component transcriptional regulator, LuxR fa... 255 6e-67 UniRef50_Q027R2 Two component transcriptional regulator, LuxR fa... 255 6e-67 UniRef50_C6WV69 Two component transcriptional regulator, LuxR fa... 255 6e-67 UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microsc... 255 6e-67 UniRef50_A9U6E4 Predicted protein (Fragment) n=1 Tax=Physcomitre... 255 8e-67 UniRef50_C2RNB5 Two-component protein Kinase n=1 Tax=Bacillus ce... 255 8e-67 UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR fa... 255 9e-67 UniRef50_UPI000050F8A6 two component transcriptional regulator, ... 255 9e-67 UniRef50_Q5NZZ3 Two-component system response regulator n=3 Tax=... 255 1e-66 UniRef50_C5UZV9 Two component transcriptional regulator, LuxR fa... 255 1e-66 UniRef50_A0NNP3 Response regulator containing a CheY-like receiv... 254 1e-66 UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=... 254 1e-66 UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium... 254 1e-66 UniRef50_C4XMF2 NarL family two-component response regulator n=1... 254 2e-66 UniRef50_B4B0U5 Two component transcriptional regulator, LuxR fa... 254 2e-66 UniRef50_B1L0K3 DNA-binding response regulator, LuxR family n=22... 254 2e-66 UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphy... 254 2e-66 Sequences not found previously or not previously below threshold: >UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU8_DESAH Length = 219 Score = 307 bits (788), Expect = 2e-82, Method: Composition-based stats. Identities = 77/216 (35%), Positives = 132/216 (61%), Gaps = 4/216 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+ +DH +VR G+ +L I+VVGEA G +A+K A DVVLMD+SMP + Sbjct: 4 IKVLVAEDHTIVRKGLCSLLYSEPDIEVVGEAENGREAIKMVEELAPDVVLMDISMPELN 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++ATR++ + DVKI++L++H+ + ++AGA+GYL K +AP +++ AI + ++G Sbjct: 64 GMDATRQLKKKYPDVKILILSMHSTEEYIFETLRAGASGYLIKRSAPTDLIKAIHAAHAG 123 Query: 122 QRYIASDIAQQMALSQIEPEK----TESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 +++ I++++ + ++ ++ LS RE +++ +I +G EI+ L +S Sbjct: 124 DCFLSPSISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANREIAGHLYIS 183 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 PKTV ++R + KL ++G ELT AIR GL Sbjct: 184 PKTVEAHRNHIQKKLGLNGTAELTKYAIRKGLVELG 219 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 305 bits (782), Expect = 8e-82, Method: Composition-based stats. Identities = 79/214 (36%), Positives = 127/214 (59%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +LLVDDH +VR G R +LE ++VVGEA GE+A+ R DV+LMD+SMPG+ Sbjct: 15 ITLLLVDDHPVVRKGTRELLEGEADLRVVGEAESGEEAILKARQLMPDVILMDVSMPGMN 74 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR I V I++LT + ++ +++AGAAGYL K A+ E++ A+R+V +G Sbjct: 75 GIEATRAIKAERPGVGILVLTSYDDDAYVFALLEAGAAGYLLKNASEDELLGAVRAVAAG 134 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + + +A+++ + P +LS REL+++ + G+ EI+ L++SP+TV Sbjct: 135 ESALHPAVARKVLERFSTHQTPTPPEDALSPRELEVLRVAATGRTNKEIARDLDISPRTV 194 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETL 215 + +FSKL + E I+ G + +TL Sbjct: 195 QVHLANIFSKLGVGSRTEAVLYGIKRGWIDPKTL 228 >UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30 Tax=Bacillales RepID=B7GL14_ANOFW Length = 260 Score = 305 bits (782), Expect = 9e-82, Method: Composition-based stats. Identities = 64/223 (28%), Positives = 116/223 (52%), Gaps = 12/223 (5%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 ++L+DDH+L R GI+RIL+ + +VV E S G++A+ DVV+MD++MP + G Sbjct: 38 RIVLIDDHKLFREGIKRILDFEQDFEVVAEGSDGDEALALVERYKPDVVIMDINMPHVNG 97 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 +EATR++ + D K+I+L++H + +Q GA GYL K ++ A+R V G Sbjct: 98 VEATRQLIEAYPDTKVIILSIHDDESYVMHALQTGAMGYLLKEMDADALIEAVRVVAEGG 157 Query: 123 RYIASDIAQQMALSQIEPEKTES------------PFASLSERELQIMLMITKGQKVNEI 170 Y+ + + E P+ L+ RE +++ ++ G+ I Sbjct: 158 SYLHPKVTHNLVKEYRRLVAGEGGGKEKQNQDVCRPYHLLTRRECEVLQLLADGKSNKGI 217 Query: 171 SEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 ++ L +S KTV ++ + KLN++ + +AI++G + Sbjct: 218 ADALYISEKTVKNHVSNILQKLNVNDRTQAVVVAIKNGWVEVK 260 >UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR family n=3 Tax=Clostridia RepID=Q2RJU9_MOOTA Length = 222 Score = 302 bits (774), Expect = 8e-81, Method: Composition-based stats. Identities = 70/214 (32%), Positives = 128/214 (59%), Gaps = 2/214 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +L+ DDH LVR GIR+ILE ++VVGEA+ G++A++ R V++MD++MPG+ Sbjct: 7 ITILIADDHSLVREGIRKILELEPDLQVVGEAATGQEAIEMTRRYQPQVIIMDINMPGLN 66 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EAT+ I + + I+ LT+H + +++++G +GY+ K + +E+V A+ V G Sbjct: 67 GIEATKVIRQEWPQIAILALTIHDDEEYIIELLRSGVSGYVLKDISAEELVQAVYQVARG 126 Query: 122 QRYIASDIAQQMAL--SQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 R I +AQ++ + +P L+ RE +I++ ++ G+ EI+ +L +S K Sbjct: 127 ARVIHPGVAQKVIGCIQKQKPFTPAPVSIPLTAREREILIHVSLGKSNREIARELFISEK 186 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 TV ++ +F K+ + + A++HGL +A+ Sbjct: 187 TVKNHLTHIFHKIGVSDRTQAALYALKHGLNDAK 220 >UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus RepID=A0R9S0_BACAH Length = 216 Score = 295 bits (757), Expect = 6e-79, Method: Composition-based stats. Identities = 73/213 (34%), Positives = 122/213 (57%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +L+VDDH +R IR ILED + VVGEAS G+ ++ D +LMD+++PG Sbjct: 4 MIKILVVDDHAFLRDAIRSILEDESDMNVVGEASSGDGVLEKVEACRPDCILMDINLPGK 63 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EAT + ++ + ++++ T++ + +QAGA GYL K ++ ++VV+AIR +Y Sbjct: 64 NGIEATELVKKNYPNCRVLVFTMYEHDEYLMDALQAGADGYLLKDSSSEQVVAAIRMLYR 123 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G I + +++ + K ES L+ERE +I+ + KG EI+E L +S KT Sbjct: 124 GDSVIHPRMTKKLITYHQQKMKVESNENELTEREKEILFELVKGLSNKEIAEALYISDKT 183 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 V + ++F KLN+ + A+R+ L + Sbjct: 184 VKIHINKIFKKLNVKSRSQAVIYAVRNQLVPLD 216 >UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0H3_THERP Length = 245 Score = 294 bits (755), Expect = 1e-78, Method: Composition-based stats. Identities = 68/224 (30%), Positives = 120/224 (53%), Gaps = 10/224 (4%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 IN+L+VDDH L R+GIR LE +VGEA+ G +A++ + DV+L+D+S+PG+ Sbjct: 4 INILIVDDHPLFRSGIRWSLEQNPQFVIVGEAADGSEALRLADELSPDVILVDLSLPGMN 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLE R + R +I+LT+H ++ ++AGA+ Y +K P++++ I V G Sbjct: 64 GLEVARALKRRQPQAGVIILTMHQDDEQLFNAIRAGASAYCTKDIEPEQLIDVITRVARG 123 Query: 122 QRYIA------SDIAQQMALSQIEPEKTESP----FASLSERELQIMLMITKGQKVNEIS 171 + I +A ++ E + + F+ L+ RE++I+ + +G EI+ Sbjct: 124 EYLINEMVLSRPFVASRVLDQFRELSRLDRTSSGFFSPLTPREIEILDCVARGYSNKEIA 183 Query: 172 EQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETL 215 + LN+S +TV ++ + KL ++ + A+RHG E Sbjct: 184 QALNISDQTVKNHITSILRKLAVNDRTQAVIYALRHGWIKLEDT 227 >UniRef50_A8MF72 Two component transcriptional regulator, LuxR family n=14 Tax=Clostridia RepID=A8MF72_ALKOO Length = 224 Score = 293 bits (751), Expect = 3e-78, Method: Composition-based stats. Identities = 71/211 (33%), Positives = 119/211 (56%), Gaps = 3/211 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 INVL+ DDH LVR G+++I+E IKV+G A+ GE+AV + + DVVL+D+SMP Sbjct: 11 INVLIADDHALVRQGLKQIIELEPDIKVIGLAADGEEAVLKTQQLSPDVVLLDISMPKQN 70 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++ R++ + +KIIMLT H + + + GA GY+ K A + ++ AIR VY G Sbjct: 71 GIQTLRRLKDMDSTIKIIMLTFHEDREYLFETINLGANGYVLKDAESESLIKAIRDVYQG 130 Query: 122 QRYIASDIAQQMALSQIEPE---KTESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 YI +A ++ E + + L+ RE +++ ++ +G EI + L +S Sbjct: 131 LNYIYPTLATELVKEFNRREVKSQKRNNEDELTRREYEVLTLLAEGINNKEIGDCLFISE 190 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 KTV ++ +F K+N++ + A +H + Sbjct: 191 KTVKNHVSNIFKKINVNDRTQAAIYAYKHNI 221 >UniRef50_A0LVS2 Two component transcriptional regulator, LuxR family n=35 Tax=Actinomycetales RepID=A0LVS2_ACIC1 Length = 303 Score = 292 bits (748), Expect = 8e-78, Method: Composition-based stats. Identities = 73/215 (33%), Positives = 113/215 (52%), Gaps = 5/215 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+ DDH L R G+ +L I++V EAS G +AV DVVL+D+ MP Sbjct: 87 IKVLVADDHALFRRGLEMVLRQEPDIQLVAEASDGAEAVARAAETLPDVVLLDVRMPKRT 146 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA I KIIMLT+ E + ++AGA GYL K + EV +AIR+V+ G Sbjct: 147 GIEACAAIKEVCPSAKIIMLTISDEEADLYEAIKAGAMGYLLKEISIDEVAAAIRAVHGG 206 Query: 122 QRYIASDIAQQMALSQ-----IEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNL 176 Q I+ +A ++ + + P L+ERE++++ ++ KG +I++QL + Sbjct: 207 QSLISPSMASKLLNEFASLIKRGDARHQVPAPKLTEREMEVLRLVAKGLNNRDIAKQLFI 266 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 S TV ++ + KL +H +E A+R L Sbjct: 267 SENTVKNHVRNILEKLQLHSRMEAVVYAVREKLLE 301 >UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=Thermomicrobia (class) RepID=B9L2G4_THERP Length = 246 Score = 291 bits (746), Expect = 1e-77, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 117/210 (55%), Gaps = 1/210 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+VDDH+L R G+R+++E I+VVGEA+ G+DA+K DVVLMD++MPG+ Sbjct: 28 IRVLIVDDHDLFREGLRQLIETDPAIEVVGEAANGQDALKMVAELQPDVVLMDINMPGMD 87 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ AT I + V ++MLT++ + ++AGA YL K + P+E++ AI G Sbjct: 88 GIRATEAIVQQYRHVHVLMLTMYDDEEYVLHAIRAGARSYLVKNSKPEELLRAIHVAAEG 147 Query: 122 QRYIASDIAQQMALSQIE-PEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 I D+A + K + LS+REL ++ ++ +G +I++ LNL+ T Sbjct: 148 GATIDPDLAPILMREYQRLLTKAPTRGQDLSDRELTMLRLLAQGYNNRQIADALNLAEST 207 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 V + +F KL + + AI HGL Sbjct: 208 VKNNLSALFQKLGVRDRTQAVIYAISHGLV 237 >UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Tax=Firmicutes RepID=LIAR_BACSU Length = 211 Score = 290 bits (744), Expect = 2e-77, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 124/211 (58%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VLL+DDHE+VR G+ LE I+V+GEAS G + V+ + DV+LMD+ M G+ Sbjct: 1 MIRVLLIDDHEMVRMGLAAFLEAQPDIEVIGEASDGSEGVRLAVELSPDVILMDLVMEGM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EAT++I R +D KII+LT ++ V++AGA YL K + E+ AIR+ Sbjct: 61 DGIEATKQICRELSDPKIIVLTSFIDDDKVYPVIEAGALSYLLKTSKAAEIADAIRAASK 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+ + S +A ++ + P SL++REL+I+ +I +G+ EI E+L ++ KT Sbjct: 121 GEPKLESKVAGKVLSRLRHSGENALPHESLTKRELEILCLIAEGKTNKEIGEELFITIKT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V ++ + SKL++ + A R+ L N Sbjct: 181 VKTHITNILSKLDVSDRTQAAVYAHRNHLVN 211 >UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales RepID=D2BDI1_STRRD Length = 227 Score = 290 bits (744), Expect = 2e-77, Method: Composition-based stats. Identities = 74/208 (35%), Positives = 122/208 (58%), Gaps = 1/208 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLLVDDH L+R G+R +LE + G +VVGEA GE+A+ + DVV+MD+ MPG+ Sbjct: 19 IRVLLVDDHPLLRHGLRALLEQVGGAEVVGEAGDGEEAIALVLSLNPDVVVMDLVMPGVT 78 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR + D+ +++LT+ ++ ++AGA GY+ KGA + ++A+R+V G Sbjct: 79 GIEATRTLIDRRPDLGVLVLTMSEDDASVFAALRAGARGYVLKGADGNDFIAAVRAVARG 138 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + +A++ + PF L++RE +I+ ++ G+ EI+ +L LS KTV Sbjct: 139 EAVYGPAVARR-IRRFLTTGPESGPFPELTQREREILDLLASGKSNAEIARRLFLSQKTV 197 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 ++ +F+KL + + A R GL Sbjct: 198 KNHLTSIFAKLQVADRTQAVVRARRAGL 225 >UniRef50_A4J6C2 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=A4J6C2_DESRM Length = 218 Score = 288 bits (740), Expect = 6e-77, Method: Composition-based stats. Identities = 67/214 (31%), Positives = 120/214 (56%), Gaps = 3/214 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +L+ DDH L+R G+R+IL I VVGE + G+ AV +C N VD+VLMD++MP + Sbjct: 5 IKLLIADDHILIREGLRKILSIEPHISVVGEVTNGQQAVDYCLKNPVDIVLMDINMPIMN 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA R+I + ++ II LT+H ++ ++++ G +GY+ K P +++ I V G Sbjct: 65 GIEACRQIKKLNPNIGIIALTIHDQDEYLFELIKYGISGYVLKDIHPDQLIKTILGVAQG 124 Query: 122 QRYIASDIAQQMALSQIE---PEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 + +I + ++ + +E +L+ERE++++ + KGQ I+ L +S Sbjct: 125 ESFIPPSLTARVLAEFTRLSSGDYSEKKHLNLTEREIEVLKQVAKGQSNKAIANALYISE 184 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 KTV ++ +F K+ + + AI+ L + Sbjct: 185 KTVKNHLTNIFQKIGVADRTQAALYAIKEKLVDL 218 >UniRef50_C8WSR5 Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSR5_ALIAD Length = 231 Score = 288 bits (740), Expect = 7e-77, Method: Composition-based stats. Identities = 72/221 (32%), Positives = 120/221 (54%), Gaps = 4/221 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+VDDHEL R G+ +L GI VVGEA G +A++ +T DV L+D+ MP Sbjct: 10 IKVLVVDDHELFRRGVVTVLRSTPGIYVVGEAGNGREAIECFQTLQPDVTLLDIHMPVCN 69 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLE RK+ + + KI+MLTV + + +++GA+GY+ K +P+ ++ +R VY G Sbjct: 70 GLETARKMREANPNTKILMLTVSETEEMLFEAVKSGASGYVLKSVSPERLIECVRQVYEG 129 Query: 122 QRYIASDIAQQMALSQIEPEKTESP----FASLSERELQIMLMITKGQKVNEISEQLNLS 177 + + S +A +M +T P L+ERE +++ ++ G EI+ L +S Sbjct: 130 EPVVPSSLAMKMIAEFSRTAETRMPSSESVTELTEREREVLQYLSAGASNKEIARALFIS 189 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLSSQ 218 TV ++ + KL++ + A+R+G+ L+S Sbjct: 190 ENTVRNHVRHILDKLHLSNRAQAAAYAVRNGIARGRQLTSD 230 >UniRef50_C7MUJ2 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=101 Tax=Bacteria RepID=C7MUJ2_SACVD Length = 239 Score = 288 bits (739), Expect = 8e-77, Method: Composition-based stats. Identities = 70/219 (31%), Positives = 118/219 (53%), Gaps = 7/219 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + V+L DD +LVRAG R IL GI+VVGEA G +AV+ DVVLMD+ MP + Sbjct: 21 LRVVLADDQDLVRAGFRVILSSDDGIEVVGEAGDGWEAVEVATRERADVVLMDVQMPKLD 80 Query: 62 GLEATRKIA----RSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRS 117 GLEATR++ K+I+LT + ++AGA+G+L K A+P++++ ++R Sbjct: 81 GLEATRRLLGPAGADHP-TKVIILTTFDREDYLFEALRAGASGFLLKNASPEDLIESVRI 139 Query: 118 VYSGQRYIASDIAQQMALSQIEPE--KTESPFASLSERELQIMLMITKGQKVNEISEQLN 175 V G ++ ++ +++ P + L++RE +++ ++ KG EI+ QL Sbjct: 140 VARGDALLSPEVTRRVIARFSAPAVTGPTRRPSELTDREFEVLSLLAKGASNAEIARQLV 199 Query: 176 LSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 L TV ++ R+ +KLN+ A +G+ + Sbjct: 200 LGETTVKTHVSRILTKLNLRDRTHAVVFAYENGIVTPGS 238 >UniRef50_C7MN84 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MN84_CRYCD Length = 215 Score = 287 bits (735), Expect = 2e-76, Method: Composition-based stats. Identities = 70/215 (32%), Positives = 124/215 (57%), Gaps = 3/215 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMP-G 59 MI+V + DDH +VR G I+ ++VVGEA+ G++A V+L+D+SMP G Sbjct: 1 MIDVAIADDHAVVRQGFAFIINSQCDMRVVGEAADGKEAYDLVARVEPHVLLLDISMPPG 60 Query: 60 IGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVY 119 GL A +I+ +II+LT+ E ++ GAAGY+ K ++ + ++ AIR V Sbjct: 61 ENGLIACERISCDFPSTRIIILTMFEETDYLFYTLRGGAAGYVLKNSSTEVLLGAIRKVA 120 Query: 120 SGQRYIASDIAQQMALSQ--IEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 +G+ YI ++AQ ++ ++P+ LS RE +I ++ +G E +++L +S Sbjct: 121 TGETYIEPNMAQALSGKLHGQSGVAEKNPYHELSSREFEIFSLLAQGYTNKEAADKLFIS 180 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 KTV ++R ++++KL ++ EL HLA+++ L + Sbjct: 181 VKTVETHRSKIYAKLGVNSRAELVHLALKYHLLDL 215 >UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillaceae RepID=A0RDP4_BACAH Length = 221 Score = 285 bits (732), Expect = 6e-76, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 123/207 (59%), Gaps = 2/207 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +LLV+DH +VR G+ L+ + ++VGEA GEDA+ + RT DVVLMD+SMP + Sbjct: 15 IKLLLVEDHHIVRRGLVFFLKTREEFEIVGEAENGEDALTFVRTERPDVVLMDLSMPKMD 74 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EAT++I + +KI++L+ +E ++AGA GY K P+++V++I ++Y G Sbjct: 75 GIEATKQIKQYDETIKILILSSFSEQDYVLPALEAGADGYQLKEVQPEQLVASIIAIYEG 134 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + + K E+PF+ L++RE +++ I KG+ EI+ +L+++ +TV Sbjct: 135 NANFHPKVTPALLGR--SAVKKENPFSMLTKREQEVLQEIAKGRSNKEIAAELHITEQTV 192 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHG 208 ++ + +KL + + A++HG Sbjct: 193 KTHVSNILAKLEVDDRTQAALYAVKHG 219 >UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=Q1AVR6_RUBXD Length = 220 Score = 285 bits (730), Expect = 9e-76, Method: Composition-based stats. Identities = 57/215 (26%), Positives = 111/215 (51%), Gaps = 4/215 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + V++V+D L+R G+R +L+ +G++VVGEA+ G +A++ +VVL+D+ MP + Sbjct: 5 VRVMIVEDQALMREGLRTLLDLEEGVEVVGEAADGVEALERLPGARPEVVLVDVRMPRMD 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++ ++ R +V I+LT ++ + ++AGA GY+ K +E+ +AI V+ G Sbjct: 65 GIQLIERLGREHPEVAAIILTTFDDDEYVFRGLRAGARGYILKDTPSEELAAAIEKVHRG 124 Query: 122 QRYIASDIAQQMALSQIE----PEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 + + I ++ P + LSERE++++ ++ G EI+ L ++ Sbjct: 125 EAVLDGPITLKVISELGRLSKGPAGPQPGSGGLSEREMEVLRLVASGASNREIARALYIT 184 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 TV ++ + KL + A+ G A Sbjct: 185 EGTVKNHISSILRKLGFRDRTQAALYALERGWIEA 219 >UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR family n=4 Tax=Bacteria RepID=D1C9Z8_SPHTD Length = 212 Score = 284 bits (729), Expect = 1e-75, Method: Composition-based stats. Identities = 72/212 (33%), Positives = 125/212 (58%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +L+VDDH +VR G+ ILE + + VVGEA G+ AV+ R DVVLMD++MPG Sbjct: 1 MIRILVVDDHPVVREGLVAILEAQEDLTVVGEAGDGDQAVQQYRDLKPDVVLMDLAMPGT 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G++A ++I R + ++++LT + + + +QAGA+GYL KGA +++ A+R VY Sbjct: 61 DGVQAIQEIKRIDPNARVVVLTAYDTDERILQAVQAGASGYLLKGAPREDIFRAVRVVYR 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G + +A ++ + + E L+ REL ++ ++ +G + EI+ +L+++ +T Sbjct: 121 GGSLLEPVVAGKLLNRMGDLLRGEPVEEELTARELDVLTLMARGLRNKEIAYELSITERT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 V + ++ KL++ G E AI+ GL Sbjct: 181 VKFHANAIYRKLDVSGRTEAVSKAIQRGLVRP 212 >UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=Bacteria RepID=B4VFW8_9ACTO Length = 216 Score = 284 bits (728), Expect = 1e-75, Method: Composition-based stats. Identities = 72/208 (34%), Positives = 118/208 (56%), Gaps = 1/208 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + VLLVDDH++VR G+R LE + I+VVGEAS GE+ + DV+LMD+ MPG Sbjct: 8 VRVLLVDDHQVVRRGLRTFLEVQEDIEVVGEASDGEEGIARAEELRPDVILMDIKMPGTD 67 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA R++ +++++T TE ++AGAAGY+ K P + AIRSV++G Sbjct: 68 GIEALRRLRELANPARVLIVTSFTEQRTVVPALRAGAAGYVYKDIDPDALAGAIRSVHAG 127 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + ++A + + + S +L++RE +++ I G+ EI+ L LS KTV Sbjct: 128 HVLLQPEVAVALLTQDDQG-PSSSRGGALTDREREVLSHIADGRSNREIARALVLSEKTV 186 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 ++ + KL++ + A+RHG+ Sbjct: 187 KTHVSNILMKLDVADRTQAALWAVRHGI 214 >UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria RepID=Q3Z7M1_DEHE1 Length = 232 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 62/218 (28%), Positives = 126/218 (57%), Gaps = 3/218 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI+++L DDH++VR G++ +LE +VVGEAS G +AV + V++ D+ M G+ Sbjct: 1 MISIVLADDHQIVRHGLKALLEAEADFEVVGEASDGIEAVNLVESLQPGVLVTDLMMGGM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+E T ++ + + +++L+++ + ++AGA Y+ K + +E+V ++R Sbjct: 61 SGIEVTYQVVKRSPKTAVVILSMYGNEAYVHEALRAGARAYVLKDSTSEELVRSVREAVQ 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTE---SPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 G RY++S ++++ + +E P+ +L+ RE +++ ++ +G EI+E+L +S Sbjct: 121 GHRYLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAERLFIS 180 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETL 215 P+TV +R M KL++ +L A++ G+ E + Sbjct: 181 PRTVEVHRANMMRKLDLRNQTQLLRYALQRGIIPPENM 218 >UniRef50_B0C955 Two-component transcriptional regulator, LuxR family n=4 Tax=Cyanobacteria RepID=B0C955_ACAM1 Length = 215 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 113/209 (54%), Gaps = 2/209 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +LL DD L R G+ +LE + + VVG+A G DA+ +T DV+LMD+ MP Sbjct: 1 MIRLLLADDQALFRQGLASLLELEEDLSVVGQAQDGRDAILLTQTLQPDVILMDVRMPIC 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EATR+I + ++I++LT E+ +QAGA GYL K ++ +AIR ++ Sbjct: 61 DGVEATREIHQRFPWIRILVLTTFDEDEYIWTSLQAGALGYLLKSTPASQLAAAIRMLHD 120 Query: 121 GQRYIASDIAQQMALSQIEPE--KTESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 G + IA ++ P ++ LS+REL ++ +I +G+ EIS+ L+L+ Sbjct: 121 GHFQLGPTIAPKVIAQLRPPPLKNEQNHLERLSDRELDVLNLIGQGKSNREISQILHLTE 180 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRH 207 TV +Y ++ L + + A ++ Sbjct: 181 GTVKNYVSQLLGSLGVRDRTQAALWAQQY 209 >UniRef50_B2A8K6 Two component transcriptional regulator, LuxR family n=9 Tax=Clostridia RepID=B2A8K6_NATTJ Length = 228 Score = 283 bits (726), Expect = 3e-75, Method: Composition-based stats. Identities = 62/218 (28%), Positives = 117/218 (53%), Gaps = 8/218 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +LL DDH L R G+++IL+ + + V GEA GE+ V + +++LMD++MP + Sbjct: 10 IRILLADDHALFRQGLKKILDMEEDLAVCGEAQNGEEVVDKVKLLKPNIILMDINMPLLN 69 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EAT+ + + + K+I LT+H + ++++ GAAG+L K +V AI+ V G Sbjct: 70 GVEATKYVKEVSPETKVIALTIHEDEEYLFEIVKEGAAGFLLKDVETPTLVQAIQEVNKG 129 Query: 122 QRYIASDIAQQMALSQIEPEK--------TESPFASLSERELQIMLMITKGQKVNEISEQ 173 +I I ++ + E+ + L+ RE +I+ ++ +G EIS++ Sbjct: 130 NSFIHPTITHKLLGEFNRLAQNSPRNIKSDEAVQSELTGREKEILELMAQGYTNKEISKE 189 Query: 174 LNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 L +S KTV ++ + K+++ + A++ G+ Sbjct: 190 LYISEKTVKNHVSNILRKMDVTDRTQAVITALKCGVVQ 227 >UniRef50_C7RBI1 Two component transcriptional regulator, LuxR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBI1_KANKD Length = 212 Score = 283 bits (726), Expect = 3e-75, Method: Composition-based stats. Identities = 66/211 (31%), Positives = 122/211 (57%), Gaps = 1/211 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI V+L DDH ++R G+ +L VV EAS G +AV+ V ++D+SMP + Sbjct: 1 MIRVMLADDHTILRQGLVSLLSKDADCTVVAEASNGLEAVEKALETRPQVAVIDISMPEL 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+E ++I + KI++LT+H E +++AGA+GYL K +A +E++ A++++ + Sbjct: 61 NGMEVVKRIHDKLPECKILVLTMHEEQEYVIHMVRAGASGYLLKDSASEELIDAVKALAT 120 Query: 121 GQRYIASDIAQQMALSQIEPEKT-ESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 G+ Y + A +A +P+K + P+ +L++RE ++ ++ G+ +I+ L++S K Sbjct: 121 GKTYYSQYAASVLATQYSQPDKEWQDPYKNLTQREREVFHLVVDGKTTKDIARTLDISVK 180 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 T ++R ++ KL + EL A +H L Sbjct: 181 TAENHRGKVLDKLGVSNTAELVRYAAKHNLL 211 >UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Actinobacteria (class) RepID=D2AX12_STRRD Length = 239 Score = 283 bits (726), Expect = 3e-75, Method: Composition-based stats. Identities = 67/215 (31%), Positives = 114/215 (53%), Gaps = 4/215 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+VDD LVR G+ IL +VVGEA G AV R DVV+MD+ MP + Sbjct: 11 IRVLIVDDQPLVRRGLSLILSPDPSFEVVGEAENGAQAVTLARRLRPDVVVMDIRMPVLD 70 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ ATR++A + D +++ L+ + ++AGA G+L K ++P+++ +AIR+V++G Sbjct: 71 GVGATRELAATVPDCRVLALSTFDLDEYVVGALRAGAYGFLPKDSSPEDLSAAIRTVHAG 130 Query: 122 QRYIASDIAQQMALSQIEPEKTESP----FASLSERELQIMLMITKGQKVNEISEQLNLS 177 + +A + ++ + + P L+ RE+++ ++ G IS L++S Sbjct: 131 EAAVAPRLLTRLISTYVRAPHGTRPTPTGLGELTPREVEVWRLMATGLDNTGISRTLDIS 190 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 TV +Y +F KL + + +A GL A Sbjct: 191 LSTVKNYITSIFDKLAVRDRAQAVIVAYESGLVTA 225 >UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ Length = 218 Score = 283 bits (725), Expect = 3e-75, Method: Composition-based stats. Identities = 70/217 (32%), Positives = 125/217 (57%), Gaps = 7/217 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMP-GI 60 + +++ DDH +VR G IL + ++VV A+ G +A + + DV+++D+SMP G Sbjct: 1 MKIVIADDHAVVRTGFSMILNYQEDMEVVATAADGVEAYQKVLEHRPDVLILDLSMPPGE 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GL AT KI+ S D KI++LT+ + V+++GA GY+ K + ++++ A+R+VY Sbjct: 61 SGLIATSKISESFPDTKILILTMFDDEEYLFHVLKSGAKGYILKNSPDEQLILAVRTVYQ 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTE------SPFASLSERELQIMLMITKGQKVNEISEQL 174 G+ Y+ + + + +T+ PF LS+REL+I+ +I KG +I+E+L Sbjct: 121 GETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNKDIAEKL 180 Query: 175 NLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 +S KTV +++ + +KLN+ EL A++ L Sbjct: 181 FVSVKTVEAHKTHIMTKLNLKSKPELVEYALKKKLLE 217 >UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=C6E2Z1_GEOSM Length = 216 Score = 283 bits (725), Expect = 4e-75, Method: Composition-based stats. Identities = 78/216 (36%), Positives = 126/216 (58%), Gaps = 2/216 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI V++VDDH +VR GIR +LE + VV EA G A + A VVLMDM+MPG+ Sbjct: 1 MIKVMVVDDHSIVREGIRILLERFPDLSVVAEADNGRKASELAADLAPHVVLMDMTMPGL 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G++AT+++ + +V++++L++H + ++ +AGA GYL K A E+V A+R V Sbjct: 61 NGIDATQRLLAACPEVRVLILSMHKDKRFVSQAFRAGARGYLLKDCASAELVQAVRQVAC 120 Query: 121 GQRYIASDIAQQMALSQIE--PEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 G+ Y+ I + + PE P L+ RE +++ +I +G + QLN++ Sbjct: 121 GEMYVCHGIIGVVVHDYVTRLPESLTQPEVPLTPREREVLQLIAEGNNAKNAAYQLNINV 180 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 KTV+++R ++ KL + ELT AIR GL + E+ Sbjct: 181 KTVDTHRQQIMKKLKMRSVAELTKYAIREGLISMES 216 >UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax=Bacillales RepID=DEGU_BREBE Length = 236 Score = 283 bits (725), Expect = 4e-75, Method: Composition-based stats. Identities = 62/225 (27%), Positives = 113/225 (50%), Gaps = 15/225 (6%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I ++++DDH+L R G++RIL +VV + GE+AV+ DV+LMD++MP + Sbjct: 10 IQIVIIDDHQLFREGVKRILAMEPEFEVVADGEDGENAVELVEKYNPDVILMDINMPKVN 69 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR + + DVK+++L++H + V++ GA+GYL K ++ A++ V G Sbjct: 70 GVEATRDLIQRYPDVKVLVLSIHDDESYVTHVLKTGASGYLLKEMDADALIEAVKVVAQG 129 Query: 122 QRYIASDIAQQMALSQIEPEKTES---------------PFASLSERELQIMLMITKGQK 166 YI + + + P L+ RE +++ ++T G Sbjct: 130 GAYIHPKVTHNLIKEYRRLVNEDEQESSEIGFKEVEYRKPLHILTRRECEVLQLMTDGYS 189 Query: 167 VNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 I E L +S KTV ++ + K+N++ + +I++G Sbjct: 190 NRMIGEALYISEKTVKNHVSNILQKMNVNDRTQAVVESIKNGWVK 234 >UniRef50_D1VBH1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=D1VBH1_9ACTO Length = 248 Score = 282 bits (723), Expect = 5e-75, Method: Composition-based stats. Identities = 71/223 (31%), Positives = 119/223 (53%), Gaps = 7/223 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+ DD LVRAG R ++E + VV EA+ G AV+ R DVVLMD+ MP + Sbjct: 26 IRVLIADDEGLVRAGFRALVEATPDLTVVAEAADGVAAVRESRRLRPDVVLMDIRMPVMN 85 Query: 62 GLEATRKIARS--TADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVY 119 GLEATR IA I+++T ++ + ++AGAAG++ K P+ +++AIR+V Sbjct: 86 GLEATRLIAADAVRPGPGILVVTTFDDDEYVFEALRAGAAGFILKDTQPENLLAAIRTVA 145 Query: 120 SGQRYIASDIAQQMALSQIE-PEKTESPF----ASLSERELQIMLMITKGQKVNEISEQL 174 +G +A + +++ + + P SP ++L++RE ++ I G EI++ L Sbjct: 146 AGDALLAPGVTRRLIAAFVRVPAPPASPLTGLASTLTDRERAVLTQIANGYSNAEIAQAL 205 Query: 175 NLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLSS 217 +S TV ++ + +KL +L A GL + ++ Sbjct: 206 YVSVSTVKTHVGHLLAKLAARDRAQLVIAAYESGLVAPGSATA 248 >UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfobacteraceae RepID=B8FFJ9_DESAA Length = 212 Score = 282 bits (722), Expect = 7e-75, Method: Composition-based stats. Identities = 85/212 (40%), Positives = 139/212 (65%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VLL DDH +VRAG+RRI+ED + IKV+ EAS G++A+ + DV ++D+SMPGI Sbjct: 1 MIRVLLADDHVIVRAGLRRIIEDSEDIKVIVEASNGKEAIDLTLEHCPDVAVVDISMPGI 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GLE ++ D+ +++LT+H E + ++AGA GY++K +AP+++V+AIR ++S Sbjct: 61 DGLEVVSRLHAELPDLPMLILTMHEEEQYVVRAIEAGAMGYMTKKSAPEQLVTAIRKLHS 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G R++ + A+ +AL K S SLS+RELQ++ + G EI++ ++S KT Sbjct: 121 GSRFLTEEAAELLALRVSRWSKGGSLLDSLSKRELQVLRHLASGHTNREIADSYHISVKT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 V++YR R+ KLN+ + +++ AI++ L N Sbjct: 181 VDTYRARLLKKLNLRNNADISRFAIQNNLINP 212 >UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC6_SOLUE Length = 216 Score = 282 bits (722), Expect = 8e-75, Method: Composition-based stats. Identities = 72/213 (33%), Positives = 128/213 (60%), Gaps = 3/213 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +LL DDH +VR G+R +LE G +V+G+A+ G DAV + DVV+MD++MPG+ Sbjct: 4 IRILLADDHTVVRKGLRLLLESHPGFQVIGDAADGRDAVSLAGEHTPDVVVMDVAMPGLN 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA R+I+ I+ L++H++ K ++AGA YL K +A ++++A+ +V G Sbjct: 64 GIEAARQISAKLPHTAIVFLSMHSDESYVLKALKAGARAYLLKDSAEHDLIAAVIAVSEG 123 Query: 122 QRYIASDIAQQMAL---SQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 + + + I++ + Q++ + E + L+ RE +++ ++ +G+ E++ LNLS Sbjct: 124 KAFFSPAISKMLVEDYMRQMQERQIEDSYELLTTREREVLQLLAEGKNNKEVAAILNLSL 183 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 TV ++R + KLN+H EL AIR G+ + Sbjct: 184 YTVETHRGNILQKLNLHSGAELILYAIRKGVIS 216 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 282 bits (722), Expect = 8e-75, Method: Composition-based stats. Identities = 68/218 (31%), Positives = 116/218 (53%), Gaps = 4/218 (1%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 +LL DDH L R G+R +L ++V GEA+ DAV + DVVLMD+ M G+ Sbjct: 5 KILLTDDHTLFRQGVRTLLAAEADMEVAGEAANAMDAVALAQQLRPDVVLMDIGMAGMSS 64 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 EATR I + +VK+I L+++ + A+ + GA GY+ K + ++++AIR V G Sbjct: 65 FEATRLIRKERPEVKVIFLSMYDDEDYLAECVDMGANGYILKDSPADQLITAIREVQRGG 124 Query: 123 RYIASDIAQQMALSQ----IEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 Y++ + ++ F +L++RE +I+ M+ +G+ V EI+ LS Sbjct: 125 SYLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKEIAAFFELSV 184 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLS 216 KTV ++++ + KL+IH +L AI+ + + Sbjct: 185 KTVEAHKFNLMRKLDIHNKAQLVQYAIQKKIIRLPETT 222 >UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria RepID=Q2LSF1_SYNAS Length = 217 Score = 282 bits (722), Expect = 9e-75, Method: Composition-based stats. Identities = 73/215 (33%), Positives = 124/215 (57%), Gaps = 2/215 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 +NVLL DDH++VR G+R +LE + VV EA G+ + R ++++MD+SMP + Sbjct: 3 VNVLLADDHKIVRDGLRTLLETHGSMNVVAEAENGQKTITLARELHPEIIIMDISMPDMN 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++ATRKI +K+I L++H + +++AGA+GYL K A +E+V+AI++V S Sbjct: 63 GIDATRKITSDLPGIKVIALSMHADRHFVIGMLEAGASGYLLKDCAFEELVNAIQTVLSN 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESPF--ASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 Y++ IA + + + S + L+ RE +++ ++ +G +I+ L++S K Sbjct: 123 HTYLSPTIADIVVKNYVHKAAGTSVVVSSELTPRERELLQLLAEGLSAKQIAANLHVSVK 182 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 TV ++R + KL + EL AIR GL T Sbjct: 183 TVETHRRNITQKLGVGSVAELIKYAIREGLTTVGT 217 >UniRef50_D1C1C8 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1C1C8_SPHTD Length = 237 Score = 281 bits (721), Expect = 1e-74, Method: Composition-based stats. Identities = 74/215 (34%), Positives = 118/215 (54%), Gaps = 2/215 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I+VLLVDDH L R +R +LE I+V+GEA G A + DV+LMD+SMPG+ Sbjct: 23 ISVLLVDDHVLFRQALRHLLEAEPDIRVIGEAGDGRSAQQLAERFHPDVILMDISMPGVD 82 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ ATR + + KII+LT+ E+ + ++AGA YL K + +V+ AIR+V G Sbjct: 83 GVTATRDLKAGIPNTKIIILTMFAEDGHVIRAIRAGADAYLLKNSESSKVIDAIRAVARG 142 Query: 122 QRYIASDIAQQMALSQIEPE--KTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 + I +A ++ + E A L+ERE+Q++ ++ G EI+ +L+L+ Sbjct: 143 ESVIEPQLATKLLNEFRRISEFREEETVAGLTEREIQLLRLVASGMSNKEIAAELSLAES 202 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 TV + +F KL++ + A+ HGL + Sbjct: 203 TVKNRLSLLFEKLDVKDRTQAAIYALSHGLITRKD 237 >UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteria RepID=C1F9F6_ACIC5 Length = 213 Score = 281 bits (721), Expect = 1e-74, Method: Composition-based stats. Identities = 65/212 (30%), Positives = 119/212 (56%), Gaps = 8/212 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +L+VDDH +VR G+ +L + G +V+ EA G +A+ R + D+ +MD+ +P + Sbjct: 10 IRILVVDDHHIVRQGLVALLNTLPGFEVIAEAGDGVEAIALHREHQPDITIMDLRLPRMN 69 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA +I + +I++LT + + +QAGA GYL KG ++ +AIRSV++G Sbjct: 70 GVEAITRIREESPGARIVVLTTFDGDEDIYRALQAGARGYLLKGMDADDLTAAIRSVHAG 129 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + I + +A+++A + L+ REL ++ +I +G+ EI+ L++S TV Sbjct: 130 KSRIPTVVAERLAERMSG--------SELTARELDVLRLIVQGRSNREIAADLHISEATV 181 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 ++ + SKL + + A++ GL + E Sbjct: 182 KTHINNLLSKLGVSDRTQAATTALQRGLVHLE 213 >UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobacteria RepID=GACA_PSEAE Length = 214 Score = 281 bits (721), Expect = 1e-74, Method: Composition-based stats. Identities = 128/214 (59%), Positives = 168/214 (78%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VL+VDDH+LVR GI R+L DI+G++VVG+A CGED +K R DVVLMD+ MPGI Sbjct: 1 MIKVLVVDDHDLVRTGITRMLADIEGLQVVGQADCGEDCLKLARELKPDVVLMDVKMPGI 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GGLEATRK+ RS D+K++++TV E+P P ++MQAGAAGY++KGA +E+V AIR V++ Sbjct: 61 GGLEATRKLLRSQPDIKVVVVTVCEEDPFPTRLMQAGAAGYMTKGAGLEEMVQAIRQVFA 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 GQRYI+ IAQQ+AL +P++ +SPF SLSERE+QI LMI KV IS++L LSPKT Sbjct: 121 GQRYISPQIAQQLALKSFQPQQHDSPFDSLSEREIQIALMIANCHKVQSISDKLCLSPKT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 VN+YRYR+F KL+I DVEL LA+RHG+ +A + Sbjct: 181 VNTYRYRIFEKLSITSDVELALLAVRHGMVDAAS 214 >UniRef50_D1XHI5 Two component transcriptional regulator, LuxR family n=4 Tax=Streptomyces RepID=D1XHI5_9ACTO Length = 222 Score = 281 bits (720), Expect = 1e-74, Method: Composition-based stats. Identities = 68/219 (31%), Positives = 114/219 (52%), Gaps = 7/219 (3%) Query: 5 LLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGLE 64 ++ DD +VR GI +L + GI+VVG A G++AV A DVVLMD+ MP G+E Sbjct: 2 VVADDQAIVREGIVMLLGLLPGIEVVGAAKDGDEAVALVAEKAPDVVLMDLRMPRCDGVE 61 Query: 65 ATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQRY 124 ATR+I + ++++LT ++ +QAGA GYL+K A +E+V AI +V SG+ Sbjct: 62 ATRRIRKEHPRTQVVVLTTFADDDSLFTALQAGARGYLTKDARGEEIVQAIDAVMSGEAG 121 Query: 125 IASDIAQQMALSQIEPEKTESP-------FASLSERELQIMLMITKGQKVNEISEQLNLS 177 ++ + +++ E +P L+ RE +++++I +G EI+ L++S Sbjct: 122 LSPKVQRRLLERVTGSETVPAPCALPSELPDGLTPREAEVLVLIAEGLSNREIARALHVS 181 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLS 216 TV ++ +F+K + A GL S Sbjct: 182 AATVKTHINNLFAKTGARDRTQAVRYAYGRGLARPPRTS 220 >UniRef50_C6BTX3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTX3_DESAD Length = 217 Score = 281 bits (720), Expect = 1e-74, Method: Composition-based stats. Identities = 77/213 (36%), Positives = 123/213 (57%), Gaps = 2/213 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLLVDDH++VR G+R L IKVVGEA+ G++AV+ + D++LMDM MP + Sbjct: 5 IKVLLVDDHDIVRIGVRSFLGSFDDIKVVGEAANGQEAVEMTAELSPDIILMDMLMPVMD 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++A R+I +II LT + ++AGA GYL K + P E++ AIR V+ G Sbjct: 65 GIQAIREIRDRKLPGRIIALTSFATDDKLFPAIKAGAMGYLLKDSTPDELLEAIRRVHRG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTE--SPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 + +A DIA+++ +P + L+ REL + ++ KG+ I+E++ +S Sbjct: 125 EPSLAPDIARKVLSELSQPGEDSETPTPDPLTPRELDTLKLVAKGKSNKAIAEEMFVSEA 184 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 TV ++ + SKL++ VE T A+R G+ + Sbjct: 185 TVRTHMTSILSKLHLANRVEATLYALREGIASL 217 >UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiaceae RepID=Q1LEP5_RALME Length = 214 Score = 281 bits (720), Expect = 1e-74, Method: Composition-based stats. Identities = 81/214 (37%), Positives = 128/214 (59%), Gaps = 2/214 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI V++ DDH +VR G+R ILE +VVGEA+ G + + R + V+L+D+SMPG Sbjct: 1 MIRVIIADDHTVVRNGLRHILERTSDFEVVGEAARGTEVPQLVRELSPHVILLDLSMPGR 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GLE R++ ++I++LT+H E + +AGAAGYL+K +A E+V A+R V + Sbjct: 61 NGLELIRQLRTDHPALRILVLTMHAEEQYVVRAFRAGAAGYLTKESAATELVEALRKVAA 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G Y++ +A+++AL E K ++P LS+REL++ I G+ + +I+ L +S KT Sbjct: 121 GGTYVSPAMAEKLALGLQE--KPDAPHEGLSDRELEVFRRIVDGESLTQIAAALCVSAKT 178 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 V++Y+ R+ KL + D L AI L E Sbjct: 179 VSTYKMRLMEKLQLRSDAALVRYAIEARLFGDED 212 >UniRef50_A0K2I9 Two component transcriptional regulator, LuxR family n=5 Tax=Actinomycetales RepID=A0K2I9_ARTS2 Length = 250 Score = 280 bits (719), Expect = 2e-74, Method: Composition-based stats. Identities = 74/237 (31%), Positives = 121/237 (51%), Gaps = 28/237 (11%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLLVDD L+R G R ILE +++VGEAS G +A++ R DVVLMD+ MP + Sbjct: 7 IKVLLVDDQPLLRMGFRLILEGEDDLRIVGEASDGAEAIRQVREVDPDVVLMDVRMPVLD 66 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR + S + K+I+LT + +QAGA+ +L K AP E+VSA+R V SG Sbjct: 67 GIEATRAVTSSGSHAKVIILTTFDLDEYAFAGLQAGASAFLLKDVAPSELVSAVRVVASG 126 Query: 122 QRYIASDIAQQMALSQIEP----------------------------EKTESPFASLSER 153 +A + +++ + + ++ + +L+ R Sbjct: 127 DAVVAPRVTRRLLEAYVREGNPPAVNGQRAGTSAPAAGRGRHSLGEEQQRDPLLEALTPR 186 Query: 154 ELQIMLMITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 E++++ + +G EI+ + LS TV ++ R+ +KL++ V+ A GL Sbjct: 187 EMEMLEAMAEGLSNAEIAHRFFLSEATVKTHVRRILAKLHLRDRVQAVVYAYETGLV 243 >UniRef50_B2J2N1 Two component transcriptional regulator, LuxR family n=12 Tax=Cyanobacteria RepID=B2J2N1_NOSP7 Length = 232 Score = 280 bits (719), Expect = 2e-74, Method: Composition-based stats. Identities = 61/208 (29%), Positives = 109/208 (52%), Gaps = 5/208 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +L+VDD L+R G++ +LE ++VVG+A G+ A++ DVVLMD+ MP + Sbjct: 9 IRLLIVDDQSLIRQGLKAMLEQEPDLEVVGDAENGKVALELVAELQPDVVLMDIRMPEMD 68 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G AT+ I +S ++K+++L+ ++ M+AGA GYL K E+ AIR +SG Sbjct: 69 GRTATKLIMQSFPNIKVLVLSTFDDDSYLTGAMRAGAKGYLLKDMPSSELADAIRFGHSG 128 Query: 122 QRYIASDIAQQMA-----LSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNL 176 + ++ + S + ++ RE +++ +I G EI++QL + Sbjct: 129 YTQFGPGLFDKLLVTEAASASANQNSASSKPSEITAREQEVLCLIGVGATNREIAQQLYI 188 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLA 204 + TV ++ + S+LN+ +L A Sbjct: 189 TEGTVKTHVTSILSRLNLKNRSQLAIYA 216 >UniRef50_D1AAU8 Two component transcriptional regulator, LuxR family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AAU8_THECD Length = 220 Score = 280 bits (719), Expect = 2e-74, Method: Composition-based stats. Identities = 76/209 (36%), Positives = 127/209 (60%), Gaps = 2/209 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+ DDH + R G+R +LE + G++VVGEA G AV+ DVV+MD+ MPG Sbjct: 10 IRVLITDDHPVFRQGLRGLLEAL-GVEVVGEAESGPQAVQLAAELQPDVVVMDLHMPGGN 68 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR I R++ + +++LT+ ++ M+AGA GYL K + +E+ A+R+V +G Sbjct: 69 GIEATRTITRTSPRIGVLVLTMFRDDDSVFAAMRAGARGYLLKESGAEEIARAVRAVAAG 128 Query: 122 QRYIASDIAQQMALSQIE-PEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 + +IA+++ + P+ ++ F L+ERE +++ +I +G+ EI++ L LSPKT Sbjct: 129 EAIYGPEIARRVLTYFADMPDPKQTAFPELTEREREVLQLIAQGRSNGEIAQTLFLSPKT 188 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 V ++ +F KL++ + LA GL Sbjct: 189 VRNHVSNIFMKLHVADRAQAIVLAREAGL 217 >UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT Length = 220 Score = 280 bits (718), Expect = 2e-74, Method: Composition-based stats. Identities = 72/215 (33%), Positives = 126/215 (58%), Gaps = 3/215 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + VLLV+DH +VR G++ +L + ++VVGE + G AV+ A DVV+MD++MP + Sbjct: 5 VRVLLVEDHTIVREGLKALLTATEDLEVVGEVADGRAAVEAAERLAPDVVVMDINMPKLD 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ ATR+I ++++L+++ ++AGA+GYL KG+ ++V+AIR V G Sbjct: 65 GVGATREIREKVNAPRVLILSMYDGEEYVRPAIRAGASGYLLKGSGLSDLVTAIREVAGG 124 Query: 122 QRYIASDIAQQMALSQIEPE---KTESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 + + +A+ + + P SL++RE +++ ++ +G+ EI++ L LS Sbjct: 125 NAFFSPTVAKILLQESRGERSVKEAPDPADSLTKREREVLTLVGEGKSSPEIAKILGLSV 184 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 KT+ +R R+ +KL +H L AIR GL +AE Sbjct: 185 KTIEGHRGRIMAKLGVHNVAGLVRQAIRIGLVSAE 219 >UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=C7QHJ1_CATAD Length = 222 Score = 280 bits (718), Expect = 2e-74, Method: Composition-based stats. Identities = 66/211 (31%), Positives = 116/211 (54%), Gaps = 1/211 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +L+VDDH +VR G+R + + G +VVGEAS G A+ + DVVLMD+ MP +G Sbjct: 12 LRLLIVDDHPIVRDGLRGVFDGEDGFEVVGEASDGAQALVRAAESGPDVVLMDLRMPTMG 71 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA R++ V++++LT + ++AGA GYL K A ++++ A+R+ +G Sbjct: 72 GVEAIRRLRVEQPAVRVLVLTTYDTESDVLPAIEAGATGYLLKDAPREDLIRAVRAAAAG 131 Query: 122 QRYIASDIAQQMALSQIEP-EKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 Q +A +AQ++ P + P +L+EREL+++ ++ G E + +L +S T Sbjct: 132 QPVLAPTVAQRLMTRVQTPLAEPAPPGDALTERELEVLRLVASGTTNRETARKLFISEAT 191 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V ++ ++K + A + GL Sbjct: 192 VKTHLLHAYAKFGVRDRAAAVAEAYKRGLLK 222 >UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37 Tax=Bacteria RepID=D1AEE5_THECD Length = 244 Score = 280 bits (717), Expect = 3e-74, Method: Composition-based stats. Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 6/216 (2%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRT-----NAVDVVLMDMSM 57 +LL DDH LVR G+R IL+ + VVGEA G +A++ R VD+ ++D++M Sbjct: 29 RILLADDHALVRRGVRLILDGEPDLWVVGEAGDGAEAIEQVRRRAGTPQEVDLAVLDVAM 88 Query: 58 PGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRS 117 P + GL+A R+++R ++I++LT+H + ++AGAAGY+ K A +++V A R+ Sbjct: 89 PRMTGLQAARELSRMYPRLRILILTMHDNEQYLFEALKAGAAGYVLKSLADRDLVQACRA 148 Query: 118 VYSGQRYIASDIAQQMALSQIEPEKT-ESPFASLSERELQIMLMITKGQKVNEISEQLNL 176 G+ ++ + S +E + E P L+ RE +I+ ++ +G EI++ L + Sbjct: 149 AVRGEPFLYPGAISVLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSREIADTLFI 208 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 S KTV +R + +KL + +ELT AIR GL Sbjct: 209 SVKTVERHRANILAKLGMKDRLELTRYAIRTGLIEP 244 >UniRef50_C1TQ52 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQ52_9BACT Length = 214 Score = 280 bits (717), Expect = 3e-74, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 123/210 (58%), Gaps = 1/210 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +LL DDH+++R G++ +L + ++VV EA GE+A+ DV +MD+ MP + Sbjct: 3 IKILLADDHKILREGVKALLNRQEDMEVVAEAGNGEEALSIAGEIRPDVTVMDVMMPQMD 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR+I + +++ L+++ + +++++ GA G+L K A E+V A+R V G Sbjct: 63 GIEATRRIVEDGSS-RVVALSMYADRSFVSEMLKVGALGFLLKDCASTELVEAVRKVMDG 121 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + Y+ I+ +A + L+ RE +I++++ +G E++E+L+LS KTV Sbjct: 122 EIYLGPSISHIVAKLYVSSLHDPDDIEPLTPREKEILMLLAEGNTNREVAERLHLSIKTV 181 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++R + +KL + +L AIR+G+ + Sbjct: 182 GTHRQHIMNKLKLKNLADLVKYAIRNGMIS 211 >UniRef50_A9AX03 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AX03_HERA2 Length = 218 Score = 280 bits (717), Expect = 3e-74, Method: Composition-based stats. Identities = 73/212 (34%), Positives = 119/212 (56%), Gaps = 3/212 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +L+ DD +VR G+ +L ++V+ AS G +AV+ T D++LMD+ MP + Sbjct: 1 MIKLLICDDQAVVRDGLSIMLNLAPDLEVIAVASNGREAVQLSATWQPDLILMDLKMPIM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EATR+I+ + VKI++LT + ++ + ++AGAAGYL K A ++VSAIR S Sbjct: 61 NGIEATRQISAAQPLVKILVLTTYDDDEWLFEAIRAGAAGYLLKDMAHSDLVSAIRGTVS 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFA---SLSERELQIMLMITKGQKVNEISEQLNLS 177 G+ Y+ ++ ++ L+EREL ++ +I G I+EQL LS Sbjct: 121 GKAYVDPNVTARLLSQVATSRNQPPASQLTGRLTERELAVLNLIATGHTNASIAEQLRLS 180 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 TV ++ + SKL++ + LA+ HGL Sbjct: 181 EGTVRNHVSTILSKLDVADRTQAALLAVEHGL 212 >UniRef50_A5V148 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=A5V148_ROSS1 Length = 216 Score = 279 bits (716), Expect = 4e-74, Method: Composition-based stats. Identities = 65/211 (30%), Positives = 119/211 (56%), Gaps = 1/211 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I++L+V+D L+R G+R IL+ + I+VVGEA G + V+ D++LMD+ MP + Sbjct: 6 ISILIVEDQTLMRQGLRTILDLEESIRVVGEARDGAEGVREALRLRPDIILMDVQMPVMN 65 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA R I + + +II+LT + + ++AGA GYL K A + ++ IR V++G Sbjct: 66 GVEAIRAIIAAWSQARIIVLTTFDRDDYVFQSVRAGAMGYLLKDAPAEALLQTIRRVHAG 125 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFA-SLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 + +I +IA + + LSERE ++++++ +G EI+ +L+++ T Sbjct: 126 EVFIQPEIASRTLREAATGRRRAGTIPFDLSEREREVLVLLAQGLSNREIAGRLSITEGT 185 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V ++ + +KL + ++A R GL + Sbjct: 186 VKNHVSNILAKLQAENRTQAANIARREGLTD 216 >UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=Q2RMH6_MOOTA Length = 221 Score = 279 bits (716), Expect = 4e-74, Method: Composition-based stats. Identities = 70/218 (32%), Positives = 125/218 (57%), Gaps = 5/218 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMP-GI 60 I V+LVDDH LVR G+R +LE I+VVGE + + +VV+MD+ + G Sbjct: 3 IRVMLVDDHALVREGLRALLEREGDIEVVGETGSAAGVLALAEESRPEVVVMDLQLGAGR 62 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EATR++ ++K+++L+++ + L + +++GA GY+ K A +E+ +AIR V Sbjct: 63 NGVEATRELVEKKPEIKVVILSMYDDEELVFRALESGARGYVLKRAGIEELTTAIRLVAR 122 Query: 121 GQRYIASDIAQQMALSQIEP----EKTESPFASLSERELQIMLMITKGQKVNEISEQLNL 176 G+ Y+ IA+++ E + L+EREL+++ + +G EI+ +L + Sbjct: 123 GEAYLDPQIARRVIEGLQERLPFTRASRPEGPELTERELEVLRLAAEGLTNAEIARRLVI 182 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 S KTV ++R + KL +H V+L AI++G+ ++ Sbjct: 183 SVKTVQAHRANIMQKLGLHDRVDLVKYAIKNGILKLDS 220 >UniRef50_C0WKL5 Response regulator n=6 Tax=Corynebacterium RepID=C0WKL5_9CORY Length = 253 Score = 279 bits (715), Expect = 6e-74, Method: Composition-based stats. Identities = 71/240 (29%), Positives = 117/240 (48%), Gaps = 23/240 (9%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I + LVDD L+RAG ++ + + VV +AS G++ + R VD++LMD+ M + Sbjct: 11 IRIALVDDQPLLRAGFAMLIGSQEDMSVVWQASDGDEVLDLARQEPVDIILMDVQMARVN 70 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ AT ++ D K+IMLT ++ + AGA+G+L K P+E++SAIR+V+SG Sbjct: 71 GIAATEEVLPEFPDTKVIMLTTFDDHNFVHGAISAGASGFLLKDVEPEELLSAIRTVHSG 130 Query: 122 QRYIASDIAQQMALSQIEPEKTES-----------------------PFASLSERELQIM 158 + ++ I Q+ E +S P A L+ RE+ I+ Sbjct: 131 EAVLSPRITAQVLQQVRSEEGGDSRKAHSASHTAAAAQPGATTATAPPSAELTPREMDIL 190 Query: 159 LMITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLSSQ 218 ++ G EISE+ +S TV ++ + +K V+ A HG+ E L S Sbjct: 191 RLMALGYSNTEISEEEFVSMATVKTHVRHVLTKTGSRDRVQAVLYAYTHGVVTVEELLSH 250 >UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH Length = 211 Score = 278 bits (714), Expect = 6e-74, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 121/210 (57%), Gaps = 4/210 (1%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 VL+ DDH+LVR GI ++LE + IKVVGEA G + VK R + D+VL+D++MP +GG Sbjct: 5 KVLVADDHDLVREGICKLLELYEDIKVVGEAGDGLETVKGVRDHFPDLVLLDLNMPRMGG 64 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 + A +KI + +K+++LT+H E +V+++GA GY+ K P+E+ AI V G Sbjct: 65 ITAIKKIKEISPGIKVLILTIHDEEEYVYEVIRSGAEGYIQKDVKPEELKRAIDKVIKGD 124 Query: 123 RYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVN 182 + ++ E + LS RE +++ ++ +G +I+++L +S KTV Sbjct: 125 KVFPRSTENEV----REVVNEKYEVCELSSREQEVLELLAQGMSNKQIAQELFISEKTVK 180 Query: 183 SYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 ++ + KL+++ + +A++ GL + Sbjct: 181 NHVSNILRKLSVNDRTQAVIVALKRGLVSL 210 >UniRef50_O07528 Uncharacterized transcriptional regulatory protein yhcZ n=3 Tax=Bacillus RepID=YHCZ_BACSU Length = 214 Score = 278 bits (714), Expect = 7e-74, Method: Composition-based stats. Identities = 61/209 (29%), Positives = 108/209 (51%), Gaps = 2/209 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +++ DDH +VR G+R I+VVGEA+ G +A++ D+VLMD+SMP + Sbjct: 1 MKIVIADDHHVVRKGLRFFFATQDDIEVVGEAATGLEALRVIEETKPDLVLMDLSMPEMD 60 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++A +K + D II+LT +++ +QAGA Y K P+E+V R V+ G Sbjct: 61 GIQAIKKAIQQFPDTNIIVLTSYSDQEHVIPALQAGAKAYQLKDTEPEELVKT-RQVHGG 119 Query: 122 QRYIASDIAQQMALSQIEPEKTE-SPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 + +++ I + E + L+ RE ++ I G+ EI+ L +S KT Sbjct: 120 EYKLSTAIMPHVLTHMKNQHDPEKEKYYQLTRREKDVLTEIANGKSNKEIAAALFISEKT 179 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 V ++ + +KL + + A+++ L Sbjct: 180 VKTHVSNLLAKLEVADRTQAALFAVKYNL 208 >UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM Length = 216 Score = 278 bits (713), Expect = 8e-74, Method: Composition-based stats. Identities = 76/209 (36%), Positives = 122/209 (58%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+VDDH L+R+G+R +L + I+VVGEA+ G + + DVVL+D+SMP + Sbjct: 4 IKVLIVDDHTLMRSGLRLMLSAQEDIEVVGEAADGSGGIAMAQKMRPDVVLLDISMPEMS 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLE + + + D+++I+LT+H + + GA GY+ K AA + A+R+VYSG Sbjct: 64 GLECLKTLLANQPDLRVILLTMHEDARYVKEGFALGAMGYVLKKAADDVLYQAVRAVYSG 123 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + YI I + + E + + LS++E +++ +I G EI+EQL +S KTV Sbjct: 124 EMYIQPSITKAVVAELTERPRADDLRKPLSDQEKKVLSLIAAGYANREIAEQLVISVKTV 183 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 +Y+YR+ KLN +L A+ +GL Sbjct: 184 ETYKYRIMEKLNCKKRSDLVKFALDNGLL 212 >UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteria RepID=Q8YV43_ANASP Length = 209 Score = 278 bits (713), Expect = 9e-74, Method: Composition-based stats. Identities = 66/211 (31%), Positives = 114/211 (54%), Gaps = 8/211 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+ DDH + R G+ I+ ++VV +A GE + + DV LMD+ MP + Sbjct: 7 IRVLIADDHAIFRQGLATIINRDPEMQVVAQAENGEQVIALFEEHQPDVTLMDLRMPEVE 66 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ A I + +II+LT + + + +QAGA GYL K P E+++AIR+V+ G Sbjct: 67 GVAAISAICATAKSARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVHRG 126 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 +YI D+ ++ PE LSEREL+++ + +G +I++ L++ TV Sbjct: 127 HKYIPPDVGAKLVQRLSNPE--------LSERELEVLRSLAQGMSNADIADALSIGEGTV 178 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 S+ R+ +KL++ + +A++ G+ N Sbjct: 179 KSHVNRILNKLDVSDRTQAVIVAVKRGIVNL 209 >UniRef50_P55184 Uncharacterized transcriptional regulatory protein yxjL n=1 Tax=Bacillus subtilis RepID=YXJL_BACSU Length = 218 Score = 278 bits (713), Expect = 9e-74, Method: Composition-based stats. Identities = 63/213 (29%), Positives = 106/213 (49%), Gaps = 3/213 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V L DD LVR G R ++ + V GEA G D + + DV+LMD+ MP Sbjct: 6 IRVALADDQPLVREGFRYVINAQTDMTVSGEAGDGHDIIALAKQTKPDVILMDVQMPRCS 65 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA + I + + KI++LT + ++AGA GYL K P+E++ AIR+ G Sbjct: 66 GIEAAKDIMSALPNTKIVILTTFDTEEYVFEGIRAGAVGYLLKDTLPEELIDAIRAAARG 125 Query: 122 QRYIASDIAQQMA---LSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 + + A ++ + E ++REL+++ + G + +I+E+L +S Sbjct: 126 EAIFRTVTAAKIISETFRAKQQTHAEELAEPFTKRELEVLQQMAYGLRNEDIAEKLFVSE 185 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 TV ++ +R+ K N + AIR+G+ Sbjct: 186 STVKTHVHRILQKCNAQDRTQAVVFAIRNGIVQ 218 >UniRef50_A3Y699 Putative two component system response regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3Y699_9GAMM Length = 226 Score = 278 bits (712), Expect = 1e-73, Method: Composition-based stats. Identities = 56/218 (25%), Positives = 110/218 (50%), Gaps = 5/218 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +++VDD LVR+G+ IL+ I+VV E + G +A++ + D++LMD+ MP + Sbjct: 3 IRIVIVDDQALVRSGLSMILDHQSDIEVVAECANGLEAIEAAKKYIPDLILMDIRMPEMD 62 Query: 62 GLEATRKIA-RSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GL AT I +I++L+ + + ++ GA+G++ K P E+V+A+ V Sbjct: 63 GLSATSAILGDLNIQTRIVILSTFDLDEYIYRALREGASGFILKDTPPDELVAAVHVVAQ 122 Query: 121 GQRYIASDIAQQMALSQIEPEKTESP----FASLSERELQIMLMITKGQKVNEISEQLNL 176 G + I +++ + E + + + L+ RE +I+ + G +EI+ +L + Sbjct: 123 GGALLTPSITKKLIGAFAELKPSHTNVTGHIDRLTTREKEILKNLALGFNNSEIASRLFI 182 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 TV ++ + SKL + + A +G+ + Sbjct: 183 GESTVKTHVSSLLSKLELRDRAQAVIFAYENGVIRVGS 220 >UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=Gammaproteobacteria RepID=A5F1Q5_VIBC3 Length = 216 Score = 277 bits (711), Expect = 2e-73, Method: Composition-based stats. Identities = 78/210 (37%), Positives = 118/210 (56%), Gaps = 2/210 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V++VDDH++V G LE I+VV AS G +A++ + + DVVLMD+SMP + Sbjct: 9 IRVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSMPIMN 68 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR I K++MLT+H +VMQAGA GY+ K + ++V AI++V+ G Sbjct: 69 GIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKTVHQG 128 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Y + +I P + LS RE I+ M+ +G +I+ LN+S +TV Sbjct: 129 ATYFCESTTSTLFSQEILPVANKP--NPLSRREEAILRMVAQGCSSKKIATLLNISYRTV 186 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++R + KL+IH EL A++HGL Sbjct: 187 ETHRQNIKHKLDIHSTAELAQYALQHGLLE 216 >UniRef50_B5JFN7 Response regulator receiver domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFN7_9BACT Length = 220 Score = 277 bits (710), Expect = 2e-73, Method: Composition-based stats. Identities = 59/216 (27%), Positives = 114/216 (52%), Gaps = 7/216 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I ++L DD L G++ +L +++VGE G++A++ CR +VLMD++MP + Sbjct: 5 IQIVLADDQALFLEGLKTLLSLDDSLEIVGECHNGQEALEACRRLRPQIVLMDLNMPVMD 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ AT+ I + +V ++ LT ++ + ++AG++GYL K +++V AIR+V SG Sbjct: 65 GVAATKAIKQELPEVNVLTLTTFDDDERVFEALKAGSSGYLLKDTPSKQLVEAIRAVSSG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTES-------PFASLSERELQIMLMITKGQKVNEISEQL 174 + ++ IA ++ + LS+RE Q+++ +++G EI+ L Sbjct: 125 ESFLQPSIASKVLAEFSRMSGPAAVKKAPVQLREPLSQREEQVLVWLSRGCSNKEIASHL 184 Query: 175 NLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 +L+ TV ++ + KL + + +A GL Sbjct: 185 DLAEGTVKNHVSNVLGKLGVLDRTQAALMARDLGLV 220 >UniRef50_B8FDP3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDP3_DESAA Length = 219 Score = 277 bits (709), Expect = 2e-73, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 130/211 (61%), Gaps = 2/211 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +L+ +DH LVR G++ ++ +VVGEA G A++ R D++L+D+SMP + Sbjct: 6 IKILITEDHALVRKGLKSLISSRSEFQVVGEADNGLAAIEMTRKCKPDLILLDLSMPKMN 65 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GL R++ + +VKI+++T+H ++ GA GYL KG PQE+ AIR++ G Sbjct: 66 GLATMRQLKKERPEVKILVITMHASQDYLIPALKEGADGYLLKGDDPQELFMAIRAIMDG 125 Query: 122 QRYIASDIAQQMALSQIEP--EKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 + Y++SD++ Q+ S I P + P ASL++RE ++ ++ +G +I++ L +SPK Sbjct: 126 KAYLSSDLSGQLIHSVINPDTREAADPLASLTQREKEVFQLVAEGNTNQQIADLLFISPK 185 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 TV+ +R + KL++H E+++ A+++G+ Sbjct: 186 TVDKHRTNLMKKLDLHSAREVSNFALKNGII 216 >UniRef50_B8GAC9 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexus RepID=B8GAC9_CHLAD Length = 213 Score = 277 bits (709), Expect = 3e-73, Method: Composition-based stats. Identities = 75/210 (35%), Positives = 122/210 (58%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 M +LLVDDH ++RAG+R +LE + VVGEA A+ T D++L+D+S+ Sbjct: 1 MSGILLVDDHAVLRAGLRLLLESQPDMVVVGEAEDSRTAITQATTLQPDLILLDLSLTNS 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GL A + + + +I++LT+H + + + AGA GY+ K AA E+++AIR+V Sbjct: 61 SGLAAIQSLRAAAPQARILVLTMHDDEGYVRQALAAGAHGYVLKRAADAELIAAIRAVLR 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+ YI + +++ + + +P+ SLSERE ++++++ +G EI+ QLNLSPKT Sbjct: 121 GELYIHPALTRRLLEDILPQPQPTNPWESLSEREREVLVLVARGYTAAEIAGQLNLSPKT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 V +YR R KL + L A+ H L Sbjct: 181 VETYRTRGMEKLGLRSRAALVQFALDHNLL 210 >UniRef50_B9XC41 Two component transcriptional regulator, LuxR family n=7 Tax=Verrucomicrobia RepID=B9XC41_9BACT Length = 267 Score = 276 bits (708), Expect = 3e-73, Method: Composition-based stats. Identities = 80/214 (37%), Positives = 124/214 (57%), Gaps = 3/214 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLL DDH +VR G+R +L K I++VGEA G +AV+ + DV+LMD++MP + Sbjct: 31 IRVLLADDHTVVRQGLRALLSGEKDIQIVGEAGTGREAVQMAQKLTPDVILMDIAMPLMN 90 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLEATRKIA K+++L+ + E+ K+ +AGA+GYL K AA ++V+A+R + G Sbjct: 91 GLEATRKIAEVAPSAKVLVLSSYGEDDYVQKLTEAGASGYLIKHAAANDLVAAVRETHKG 150 Query: 122 QRYIASDIAQQMALSQIEP---EKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 + + IA+++ L+EREL+ + I G+ I+ + +S Sbjct: 151 NAFFSPGIAKRLRDQVRAGFANGNGTKASFELTERELETLGHIVAGKPNKVIACDMGISI 210 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 KTV +R ++ +KLNIH LT AI G+ +A Sbjct: 211 KTVEKHRQQVMNKLNIHEVASLTRYAIAKGMIDA 244 >UniRef50_D1C6S1 Two component transcriptional regulator, LuxR family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6S1_SPHTD Length = 223 Score = 276 bits (708), Expect = 3e-73, Method: Composition-based stats. Identities = 71/214 (33%), Positives = 119/214 (55%), Gaps = 3/214 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I++LLVDDH L R G+ +L VVGEA+ GE+AV+ R DVVLMD+ +PGI Sbjct: 4 ISLLLVDDHALFREGLASLLSYQPDFTVVGEAASGEEAVERARELVPDVVLMDIDLPGID 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR+I R +V+++MLTV+ ++ + ++AGA GYL K E++ +R + G Sbjct: 64 GIEATRRIKRQLPEVRVVMLTVYDDHERLFQSIKAGAQGYLIKNIRSAELLDQLRGLARG 123 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFAS---LSERELQIMLMITKGQKVNEISEQLNLSP 178 + I+ +A ++ E+ LS RE++++ ++ EI+ +L++S Sbjct: 124 EAAISRRMAARILEEFARLERQAEILEPDGGLSPREVEVLELVALRLSNKEIAARLSISE 183 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 TV ++ + +KL + + A+ HGL Sbjct: 184 HTVKNHLKNILAKLQLSSRRQAAAYAVAHGLIPP 217 >UniRef50_A9B5L0 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5L0_HERA2 Length = 207 Score = 275 bits (706), Expect = 5e-73, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 117/211 (55%), Gaps = 4/211 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VL+VDDH +VR G+ +L + + VG+A+ G+ AV DVVL+D+ +P + Sbjct: 1 MIRVLVVDDHPVVRHGLMAMLGWEQDFEPVGDAADGQQAVNLIEQQQPDVVLLDLRLPQL 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+E R S + + ++LT + + + AGAAGYL K A+P+EV AIRS+Y Sbjct: 61 SGIEVMRHTRASAPNTRFLVLTTYDTDEYIGPALNAGAAGYLLKDASPEEVFRAIRSIYE 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G + S IA ++ TE LS+REL ++ ++ +G+ I+ LN+S T Sbjct: 121 GGAALQSGIAARVLKRLA----TEPAEDELSQRELDVLQLLVRGESNKAIALSLNISENT 176 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 + S+ +FSKL++ E +A++ GL Sbjct: 177 IKSHVSHIFSKLDVRSRAEAVAVALQRGLVK 207 >UniRef50_B9XL75 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XL75_9BACT Length = 234 Score = 275 bits (706), Expect = 6e-73, Method: Composition-based stats. Identities = 77/215 (35%), Positives = 127/215 (59%), Gaps = 3/215 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLL DDH +VR G+ L +++ I++VGEA G++ V R + ++VLMD+ MP + Sbjct: 19 IKVLLADDHPVVRKGLGSCLNNLEHIEIVGEAVDGQETVSKVRELSPEIVLMDLDMPTMS 78 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLEAT+ I R VK+++L++HT +++++GA GY+ K A E+V AI SV+ G Sbjct: 79 GLEATKIIRREFPLVKVLILSIHTNKDYVLQIIKSGAQGYVLKDAPLTELVRAIESVHGG 138 Query: 122 QRYIASDIAQQMALSQIEPE---KTESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 + + DI+Q M + + L+ RE +++ MI +GQ E++ ++ + Sbjct: 139 GAFFSPDISQIMLDQYLAEATNGEESGNSKKLTNRETEVLSMIAEGQSNKEMASRMGVGV 198 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 +TV ++R R+ +KL+IH LT AI HG+ E Sbjct: 199 RTVETHRERVMNKLDIHNVAGLTKYAIAHGIIKLE 233 >UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID=Q9RPE7_CORDI Length = 233 Score = 275 bits (705), Expect = 6e-73, Method: Composition-based stats. Identities = 72/230 (31%), Positives = 114/230 (49%), Gaps = 12/230 (5%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI V LVDD +LVRAG R +L+ I V EA+ G++A++ VDV+LMD+ MP + Sbjct: 1 MITVGLVDDQQLVRAGFRMVLDSQSDITVAWEANDGKEALENAANTPVDVILMDVQMPVM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GLEAT++I + D +II+LT ++ GA+G+L K AP+++++A+R+V Sbjct: 61 DGLEATKRIVATNTDTRIIVLTTFDSENYVVGAVEHGASGFLLKDTAPEDLIAAVRTVGE 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTES------------PFASLSERELQIMLMITKGQKVN 168 I+ + S L+ RE +I+L+I G+ Sbjct: 121 QSAVISPAATAVLFKSMRGHAPQTDLVATPGGDINAGLIDPLTPREQEILLLIALGKSNT 180 Query: 169 EISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLSSQ 218 EI+E+L +S TV ++ ++ SK V A GL L + Sbjct: 181 EIAEELFISLPTVKTHVSKVLSKTGSRDRVHAVLFAFSRGLVAPNQLLTH 230 >UniRef50_B8FX94 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FX94_DESHD Length = 212 Score = 275 bits (705), Expect = 7e-73, Method: Composition-based stats. Identities = 78/213 (36%), Positives = 122/213 (57%), Gaps = 1/213 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI V++ DDH L+R G+RRILE +GI+VV E G+ A+ RT D++LMD++MPG+ Sbjct: 1 MIRVVIADDHPLLREGLRRILEFEEGIQVVCEVGDGQGAINVSRTLDFDILLMDLNMPGV 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GLEA R I R + I++LTV + +V+Q G AGYL K P+ ++ +IR V+S Sbjct: 61 NGLEACRVIRRENETIGILVLTVDDSDEKVFQVLQLGVAGYLLKDVDPKTLIDSIRKVHS 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 GQ ++ + ++ + P + LS+RELQI+ + KG EI + L +S KT Sbjct: 121 GQPILSPAVTGKLLGQLVHPTQNRD-TCGLSDRELQILTYVVKGSSNREIGQALFISEKT 179 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 V ++ +F KL + + A++ L + Sbjct: 180 VKNHLSSIFRKLAVEDRTQAALKAVKLKLVQLD 212 >UniRef50_B4CWX5 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B4CWX5_9BACT Length = 210 Score = 275 bits (705), Expect = 7e-73, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 119/212 (56%), Gaps = 8/212 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +L+VDDH +VR+G+ L + VVGEA +AV R + DVVLMD+ +PG Sbjct: 7 IRILVVDDHHVVRSGLAASLGLEDDLNVVGEAGNAGEAVTQFRKHHPDVVLMDLRLPGAN 66 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G AT + R D +++M T + MQAGA GYL K AA +E++SAIR+V +G Sbjct: 67 GTAATADLRREWPDARVLMFTTFDGEEDIYRAMQAGARGYLLKSAAREELLSAIRAVAAG 126 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 +R++++ +AQ++A P+ S+RE +++ +I +G+ EI+ L +S +TV Sbjct: 127 ERHLSAALAQRLAGRVAAPDV--------SDREREVLQLIARGKANKEIAAALGISEETV 178 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 + +F K+ + + T IR GL E Sbjct: 179 KRHASNLFVKMGVADRAQATSEGIRRGLIQLE 210 >UniRef50_Q15T22 Two component transcriptional regulator, LuxR family n=4 Tax=Alteromonadales RepID=Q15T22_PSEA6 Length = 214 Score = 275 bits (705), Expect = 8e-73, Method: Composition-based stats. Identities = 134/215 (62%), Positives = 175/215 (81%), Gaps = 1/215 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +LLVDDHELVR GIRRILED++G VVGEA+ GE+AVK+CR NA D+VLMDMSMPGI Sbjct: 1 MIKILLVDDHELVRTGIRRILEDVQGFVVVGEATTGEEAVKFCRKNAPDLVLMDMSMPGI 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GGLEAT++I R + + ++I+L+VH ENP+PAKVM+ GA GYL+K + P+E+ AIR V + Sbjct: 61 GGLEATKQILRFSENTRVIVLSVHKENPIPAKVMRMGAFGYLTKDSDPKEMELAIRKVAA 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 GQ+Y++ DIAQQ+A+ ++ +PF SLSEREL+I LM+TKG KV +I++ LN+S KT Sbjct: 121 GQKYVSPDIAQQIAIGALDFSDG-NPFESLSERELEITLMLTKGSKVPDIAKFLNISAKT 179 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETL 215 VN++RYRMF KLN+ DVELTHLA+RH L N+E L Sbjct: 180 VNTHRYRMFEKLNVSTDVELTHLALRHKLINSENL 214 >UniRef50_A7NP18 Two component transcriptional regulator, LuxR family n=12 Tax=Bacteria RepID=A7NP18_ROSCS Length = 222 Score = 275 bits (705), Expect = 8e-73, Method: Composition-based stats. Identities = 65/211 (30%), Positives = 112/211 (53%), Gaps = 1/211 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +LL DDH + R G+R +LE G +VGEAS G + + D+VL+D+ MP I Sbjct: 6 IRILLADDHRMFRQGLRELLERKGGFIIVGEASTGREVLAQAAALRPDIVLLDIQMPEID 65 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ R++A++ DVK+IMLT++ ++ + ++AGA YL K A E++ I V+ G Sbjct: 66 GVAVARQLAQTHPDVKVIMLTMYRQDQHLFEAIKAGARAYLLKDADADELIDVIERVHRG 125 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + + + ++ + L+ERE I+ ++ +G I+++L LS KTV Sbjct: 126 EAALDPTVTLRVFDEFRRLSIDQDA-EQLTERERDILTLLAEGHDNRTIAQRLFLSEKTV 184 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 + +F KL + + +A++ GL Sbjct: 185 GNRLSEIFQKLGVSNRTQAALVAVQRGLIAP 215 >UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 Tax=Bacteria RepID=Q3Z8L1_DEHE1 Length = 224 Score = 275 bits (704), Expect = 8e-73, Method: Composition-based stats. Identities = 69/218 (31%), Positives = 121/218 (55%), Gaps = 3/218 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VLL DDH +VR G R +++ G+ VVGEAS G +AV+ DVV+MD++MP + Sbjct: 6 MIKVLLADDHVIVREGTRELIQRESGMMVVGEASDGVEAVEMSMKVHPDVVVMDIAMPRL 65 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EAT++I + I++LT + +++AGAA +L K +++ AIR+VY+ Sbjct: 66 NGIEATKQIKQLLPTTAILILTAYESEQYILAILEAGAASFLLKNVKGTQLLEAIRAVYA 125 Query: 121 GQRYIASDIAQQMALSQIEPE---KTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 G+ + +++ I + S L++RE++++ M +G +I++QL LS Sbjct: 126 GESVLQPSTTRRVIDQLINKATKTEEVSAVNPLTDREIEVLKMAARGVSNKDIADQLYLS 185 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETL 215 +T+ ++ +F KL++ E ++ G E L Sbjct: 186 NRTIQTHLSNIFKKLSVGSRTEAILYGLKRGWFIMEDL 223 >UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B1ZVM0_OPITP Length = 219 Score = 275 bits (704), Expect = 1e-72, Method: Composition-based stats. Identities = 76/214 (35%), Positives = 129/214 (60%), Gaps = 2/214 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + ++L DDH LVRAGIR +LE + G+ +VGEA G + V T A D+ +MD++MPG+ Sbjct: 5 LKIVLADDHALVRAGIRTLLEKLPGVTIVGEAGDGRETVTLVHTFAPDIAIMDITMPGLN 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G +AT +IAR K+++L++HT + ++AGA GYL K AA E+ A+ +V G Sbjct: 65 GFDATARIAREHPRTKVLILSMHTAEDYVLQALRAGATGYLLKDAATAELQLALNAVRKG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTE--SPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 + Y++ I++ + + E+ P +L+ R +I+ +I +G+ EI+ LNLS K Sbjct: 125 ETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIAFLLNLSVK 184 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 T+ ++R + ++L +H + A+R GL +A+ Sbjct: 185 TIETHRMHLMARLGLHDVAGVVRYALRTGLISAD 218 >UniRef50_D0LYS4 Two component transcriptional regulator, LuxR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS4_HALO1 Length = 212 Score = 275 bits (704), Expect = 1e-72, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 129/211 (61%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI + + DDH L+R G+RR+L + I+VVGEAS G +AV+ + A DV+L+D++MP Sbjct: 1 MIKIAIADDHALLREGMRRMLSQSELIEVVGEASNGAEAVEVVKEKAPDVLLLDITMPVK 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EAT I + KI++L++H + + ++AGA G++SKGA +E++ AI V+ Sbjct: 61 DGIEATADILALNVNTKILILSMHADEQYALRTLRAGANGFISKGARLEELLKAITDVHE 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 GQRY+ IA A I P+ + +LS+RE Q+M + +G EI+ L +S KT Sbjct: 121 GQRYLPDKIATSFAERHIRPDAEKPLVETLSKREFQVMTHLAQGMTNREIAGVLQISVKT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V+++R + KL + + ++T AI+HG Sbjct: 181 VDTHRSHVLKKLELRNNSDITRFAIQHGYIQ 211 >UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR family n=2 Tax=Frankia sp. EAN1pec RepID=A8L9Z7_FRASN Length = 218 Score = 274 bits (703), Expect = 1e-72, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 119/211 (56%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLL DDH LV G+ +++ + G+ VVGEA+ GE AV T DVVLMD+ MPGIG Sbjct: 8 IRVLLADDHRLVLDGLSALIDSVDGLTVVGEATSGEQAVDLAGTEHPDVVLMDIEMPGIG 67 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR+I + + ++MLT++ E+ ++AGA GYL KGA ++VV I +V G Sbjct: 68 GVEATRRITTAQPTIAVVMLTMYGEDEFVFAALRAGARGYLLKGAQQKDVVRTIGAVARG 127 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 D+A ++ + P +PF L+ERE +++ ++ G + I+ L L+PKTV Sbjct: 128 DAVFGPDVAHRVLRTFTSPPAENAPFPELTEREREVLSLLANGWPNSRIARHLQLTPKTV 187 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 + + +KL+ A R GL Sbjct: 188 ANNVSNILAKLHAPDRTAAILRARRAGLGEP 218 >UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=Proteobacteria RepID=Q09C30_STIAU Length = 213 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 114/211 (54%), Gaps = 3/211 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MIN++LVDDH L+R GIR +LE + VVGEAS GE+AVK R + DVVLMD+ MP + Sbjct: 1 MINIVLVDDHALIREGIRSLLEFTPDLHVVGEASDGEEAVKRVRELSPDVVLMDVRMPRM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GLEA R + R + ++++LT E+ + + ++AG G+L K ++ AIR V + Sbjct: 61 TGLEALRAMRREAPERRVVLLTTFDEDSVVVEALRAGVKGFLLKDVTRDQLADAIRRVAN 120 Query: 121 GQRYIASDIAQQMALSQIEPE---KTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 G+ + +A+++ E L+ REL++M +I +G EI+ L + Sbjct: 121 GETLLPPGVAERVQRGFTEVPQEFPHAELPEGLTRRELEVMRLIARGLSNREIATVLGTA 180 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHG 208 TV + + +KL + A+ G Sbjct: 181 EGTVKNQTSNILAKLGVRDRTRAVLRAMELG 211 >UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=C4L5Q6_EXISA Length = 230 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 55/223 (24%), Positives = 115/223 (51%), Gaps = 14/223 (6%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 + +VDDHEL R G++RI + VV E G +A++ ++++MD++MP + G Sbjct: 7 RIAIVDDHELFREGLKRIFDLEDEFTVVAEGRTGREAIRIAGEQKPEILIMDINMPDMNG 66 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 +EAT++++ + + ++++L++H + ++AGA+G+L K A E++SA+R+V Sbjct: 67 IEATKQLSLLSPETRVLILSIHDDESYITHALEAGASGFLLKEVASTELISAVRAVAKDG 126 Query: 123 RYIASDIAQQMALSQIE--------------PEKTESPFASLSERELQIMLMITKGQKVN 168 Y+ + + + + LS RE++++ ++ G+ Sbjct: 127 AYLHPKVTTNVLKEYRRLLQFKGEQAGRGVESRTDDPVYQLLSRREVEVLHLLADGRSNR 186 Query: 169 EISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 +IS+ L +S KTV ++ + K++++ + AIR G Sbjct: 187 DISDMLFISEKTVKNHVSSVLRKMDVNDRTQAVVDAIRRGWVE 229 >UniRef50_C7MLQ9 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=29 Tax=Actinobacteria (class) RepID=C7MLQ9_CRYCD Length = 261 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 72/216 (33%), Positives = 115/216 (53%), Gaps = 6/216 (2%) Query: 4 VLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGL 63 VL+VDD +LVR G + IL ++VVGEAS G +A + VVLMD+ MP G+ Sbjct: 45 VLIVDDQDLVRNGFKLILSSYDHVRVVGEASNGIEAYEQSLALRPQVVLMDIRMPVEDGI 104 Query: 64 EATRKIA--RSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 ATRKI + A ++++LT + +QAGA+G++ K A P ++V A+R+V +G Sbjct: 105 AATRKIVGDTALAQTRVLVLTTFDIDEYVYDALQAGASGFMLKDAEPDDIVRAVRTVAAG 164 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFA----SLSERELQIMLMITKGQKVNEISEQLNLS 177 I I +++ + + S A L++RE +I+ + +G EI++ L +S Sbjct: 165 DALIQPSITRRLIETFVSSRPRTSAAAGGLVDLTDREREILRFVARGMSNEEIADDLVIS 224 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 P TV ++ R+ KL+ H +L A GL Sbjct: 225 PATVKTHLARIMGKLDAHDRAQLVVAAYESGLVQPG 260 >UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridium RepID=C5RGJ7_CLOCL Length = 220 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 68/219 (31%), Positives = 113/219 (51%), Gaps = 10/219 (4%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MINV++ DD ++VR GI+ IL I V+GEA GE+ + + DV+LMD+ MP I Sbjct: 1 MINVIIADDQKIVREGIKMILSLYDEINVIGEAENGEELINLLQNFMADVILMDVRMPII 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EAT+ I K+I+LT E+ K ++ GA GYL K + +++AIRSVY+ Sbjct: 61 DGVEATKIIKERYIHTKVIILTTFNEDEYIFKAIKNGADGYLLKDVGSEFIINAIRSVYN 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTE----------SPFASLSERELQIMLMITKGQKVNEI 170 G + ++ ++ + + SL+ RE+ + ++ +G+ +I Sbjct: 121 GAMLLDPEVTVKVVKAFNSITNESKNSNEFDNINNKLNSLTPREIDVAKLVAQGKSNKDI 180 Query: 171 SEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 L L+ TV +Y R+ KL ++ EL + G+ Sbjct: 181 CRSLFLTEGTVKNYVTRILGKLELNSRTELAVFINQAGI 219 >UniRef50_A3CKH3 Two-component system transcriptional regulator (CheY domain and HTH-like DNA-binding domain), putative n=30 Tax=Bacteria RepID=A3CKH3_STRSV Length = 227 Score = 273 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 67/220 (30%), Positives = 113/220 (51%), Gaps = 7/220 (3%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VL+ DD L+R ++ IL I+VVG G++ ++ DV+LMD+ MP + Sbjct: 1 MIKVLIADDQALIRESLQIILSAHADIEVVGTVGDGKEVLEKLHRVRPDVILMDIRMPVM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+ T+ + DVKII+LT ++ ++ GA+GY+ KG + +E+ AI++VY Sbjct: 61 DGVLCTKAVKEQYPDVKIIILTTFDDDEFIFSALKYGASGYILKGVSTEELHEAIQTVYR 120 Query: 121 GQRYIASDIAQQMALSQIEPEK-------TESPFASLSERELQIMLMITKGQKVNEISEQ 173 G I +IA ++ + + TE +S E +I+ I G EI+ + Sbjct: 121 GGAMINPNIATKVFKIFSQMAQSNFAITVTEENIEDMSRTEWKIIQQIGFGISNKEIAAK 180 Query: 174 LNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 L LS TV +Y + +KLN+ +L A++ G+ + Sbjct: 181 LFLSEGTVRNYLSGILAKLNLRDRTQLAIWAVQTGVTQRD 220 >UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ8_HALOH Length = 209 Score = 273 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 56/211 (26%), Positives = 111/211 (52%), Gaps = 3/211 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI V LVDDH V G++ L +GI++VG + GE A+K +V ++D+ +PG+ Sbjct: 1 MIQVYLVDDHPFVLQGLKAYLNTREGIEIVGTSGNGEKAIKEIAKLNPEVAVVDLRLPGL 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+E TR+I + ++I+L+ + + + AGA Y+ K + P+++V AI++ Sbjct: 61 NGIEVTREIKKKNPGTEVIILSSFNKEDEVIEAIDAGALSYVMKDSRPEKLVEAIKAARR 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+ + +A+++ + P L+ RE +++ + +G +I++ L +S T Sbjct: 121 GEPVLTPGVAKKIMKRAARKGRKTEP---LTPREKEVLACLVRGNSNRDIAKTLCISETT 177 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V ++ + KL++ + AI + L + Sbjct: 178 VKTHVSNILKKLDVKDRTQAVIKAIENNLVD 208 >UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides sp. JS614 RepID=A1SGL7_NOCSJ Length = 213 Score = 273 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 115/211 (54%), Gaps = 3/211 (1%) Query: 5 LLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGLE 64 L+VDD EL R G+ +L GI+VVGEA G + T A DVVL+D+ MP G+E Sbjct: 2 LVVDDQELFRRGLTMLLGTEAGIEVVGEAGDGVEGTNLAATAAPDVVLLDIRMPKRSGIE 61 Query: 65 ATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQRY 124 A I + KIIMLTV E + +++GA+GYL K ++ +EV A+R V GQ Sbjct: 62 ACLAIKEAVPSAKIIMLTVSDEEADLYEAVKSGASGYLLKDSSIEEVAQAVRVVADGQSL 121 Query: 125 IASDIAQQMAL---SQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 I+ +A ++ PE+ P L+EREL+++ ++ KG EI+++L +S TV Sbjct: 122 ISPSMAVKLIDEFKQMSRPERDHVPGLRLTERELEVLRLVAKGMNNREIAKELFISENTV 181 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 ++ + KL +H +E A++ L Sbjct: 182 KNHVRNILEKLQLHSRMEAVMYAVKEKLLEL 212 >UniRef50_B0C756 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C756_ACAM1 Length = 224 Score = 273 bits (700), Expect = 3e-72, Method: Composition-based stats. Identities = 65/208 (31%), Positives = 115/208 (55%), Gaps = 1/208 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLLVDD ++VR G++ I + I++VGEA G+ A+ +T DV+LMD++MP + Sbjct: 8 IRVLLVDDEDIVRYGLKAIAQGTPEIEIVGEAGSGKAAIAQAKTLQPDVILMDINMPQMD 67 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ AT++I+R K+++LT H E + MQ GA GYL K P++ + +I+ + G Sbjct: 68 GVTATQEISRIQPHAKVLILTTHDEAEYLVEAMQQGAVGYLLKNTPPEDFIQSIQQAHKG 127 Query: 122 QRYIASDIAQQMALSQIEPEKTE-SPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 + + Q++ P + + F ++ RE ++ ++ G EISE L+++ KT Sbjct: 128 YLQLGPGLGQKLCQLLKTPVRPQIEAFEGITPREQDVLKLVATGASNREISETLHITEKT 187 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHG 208 V ++ + S++ + +L A G Sbjct: 188 VKNHVSSILSRVGVQSRTQLAIWANSAG 215 >UniRef50_A5G586 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=A5G586_GEOUR Length = 226 Score = 273 bits (700), Expect = 3e-72, Method: Composition-based stats. Identities = 75/214 (35%), Positives = 120/214 (56%), Gaps = 2/214 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLLVDDH+++R G++ IL I+VV EA+ G +A++ DVV+MD++MP + Sbjct: 13 IRVLLVDDHKIMRKGLKAILALEHTIEVVAEAANGREAIRKADELLPDVVVMDLTMPEMN 72 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA R+I + DV+ ++L++ + + +AGA GYL K A +E+V AI +V SG Sbjct: 73 GIEAIRQIVAAHPDVRTLVLSMVLDRACVMETFKAGATGYLLKDCAVEELVGAIHTVASG 132 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFA--SLSERELQIMLMITKGQKVNEISEQLNLSPK 179 + Y+ I + + S + LS+RE +++ +I G EI+ +S K Sbjct: 133 EPYLCPQITSLVIRDYTKGADANSSDSCVQLSKREREVLQLIANGNSTKEIAFTFGVSIK 192 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 TV R + KLN+ +LT A+R GL + E Sbjct: 193 TVAVQRMSVMKKLNLFNVADLTKYAVREGLTSIE 226 >UniRef50_B1Y743 Two component transcriptional regulator, LuxR family n=6 Tax=Bacteria RepID=B1Y743_LEPCP Length = 211 Score = 273 bits (700), Expect = 3e-72, Method: Composition-based stats. Identities = 80/210 (38%), Positives = 132/210 (62%), Gaps = 1/210 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + V + DDH +VR G++++L V GEAS G + + C A DV ++D MPG G Sbjct: 3 MRVFIADDHPVVRQGLKQLLGAEADFSVAGEASSGHEVIDQCGRFAWDVAVLDYRMPGKG 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++ +++ + D +++L+V E+ +V++AGAAGYL+K +AP+++V+AIR V G Sbjct: 63 GIDLIKELRQRFPDRPVLVLSVCPEDQYAMRVLRAGAAGYLTKESAPEDLVNAIRKVARG 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 R++++ + +Q+ALS E LS+RE QIM ++ G+KV EI++QL LSP T+ Sbjct: 123 GRFVSAALGEQLALSLSTG-GDEPLHCRLSDREYQIMWLLASGKKVGEIAQQLFLSPNTI 181 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++YR R+ KL++ + EL AI H L + Sbjct: 182 STYRKRILEKLDLKSNAELMRYAIGHQLVD 211 >UniRef50_Q52376 Response regulator gacA n=286 Tax=Gammaproteobacteria RepID=GACA_PSEU2 Length = 214 Score = 273 bits (699), Expect = 4e-72, Method: Composition-based stats. Identities = 125/212 (58%), Positives = 162/212 (76%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VL+VDDH+LVR GI R+L DI G++VVG+A GE+++K R DVVLMD+ MPGI Sbjct: 1 MIKVLVVDDHDLVRTGITRMLADIDGLQVVGQADSGEESLKKARELKPDVVLMDVKMPGI 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GGLEATRK+ RS D+K++ +TV E+P P +++QAGAAGY++KGA E+V AIR V++ Sbjct: 61 GGLEATRKMLRSHPDIKVVAVTVCEEDPFPTRLLQAGAAGYMTKGAGLAEMVQAIRLVFA 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 GQRYI+ IAQQ+AL +P+ SPF LSERE+QI LMI QKV IS++L LSPKT Sbjct: 121 GQRYISPQIAQQLALKSFQPQVNNSPFDLLSEREIQIALMIVGCQKVQTISDKLCLSPKT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 VN+YRYR+F KL+I DVEL LA+RHG+ +A Sbjct: 181 VNTYRYRIFEKLSISSDVELALLAVRHGMVDA 212 >UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD Length = 217 Score = 273 bits (699), Expect = 4e-72, Method: Composition-based stats. Identities = 75/213 (35%), Positives = 129/213 (60%), Gaps = 4/213 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + ++L DDH ++RAG++ +L ++V+GEAS GE+A+ D+VL+D++MP + Sbjct: 5 LRIVLADDHAVLRAGLKVLLNAEPDLEVIGEASDGEEAIDRVDDLHPDLVLLDLTMPKLN 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++ ++ + AD+KI++LT+H + V+Q GA GY+ K AA E++SAIR+V G Sbjct: 65 GVDCIEELLKKHADLKILVLTMHDDEEYLKAVLQVGAKGYVLKKAADVELLSAIRTVARG 124 Query: 122 QRYIASDIAQ----QMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 + +I +A + +S EPEK LSEREL+++ + G +I++ L++S Sbjct: 125 EMFIYPTMAAEFVYRHLVSPREPEKESKKLKQLSERELEVLRNLALGHTNQDIADLLHVS 184 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 KTV +Y+ R+ KL +H EL A+ +G+ Sbjct: 185 VKTVETYKARVMEKLEMHKRAELVRYAMENGII 217 >UniRef50_A4VZN8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=52 Tax=Bacilli RepID=A4VZN8_STRS2 Length = 213 Score = 272 bits (698), Expect = 4e-72, Method: Composition-based stats. Identities = 68/213 (31%), Positives = 118/213 (55%), Gaps = 4/213 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V+LVDDHE+VR G++ L ++VV EAS GE+ + DVV+MD+ MP + Sbjct: 4 IRVMLVDDHEMVRLGLKSYLNLQPDVEVVAEASDGEEGLAKALEVKPDVVVMDLVMPKMT 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EAT + + +I++LT + +N V++AGA GY+ K ++ E+++AIR V G Sbjct: 64 GVEATLALLKEWPQAQIVILTSYLDNEKIYPVLEAGARGYMLKTSSADEILAAIRKVALG 123 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + I +++ +++ + P L+ RE +I+ ++ KG I+++ +S KTV Sbjct: 124 EYAIETEVEKKVEHHKRHP----DLHDDLTAREREILTLLAKGYDNQRIADESFISLKTV 179 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 ++ + SKL + + A +HGL E Sbjct: 180 KTHVSNILSKLAVSDRTQAVVYAFQHGLVAQED 212 >UniRef50_Q1AST2 Two component transcriptional regulator, LuxR family n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AST2_RUBXD Length = 232 Score = 272 bits (698), Expect = 4e-72, Method: Composition-based stats. Identities = 67/214 (31%), Positives = 118/214 (55%), Gaps = 3/214 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +++VDDH+L+RAG R +LE +VVGEAS G +A++ CR DVV+MD++MPG+ Sbjct: 11 VRLIVVDDHDLIRAGFRLVLEQEPDFEVVGEASSGREAIELCRRLRPDVVVMDLAMPGVD 70 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLEATR+I V ++++T + + ++AGAAGY+ K + V+SA+R + SG Sbjct: 71 GLEATRRIKEEHPQVAVLVVTALEDPEYMLEALKAGAAGYVLKSSPLPRVISALRRLLSG 130 Query: 122 QRYIASDIAQQMALSQIEPEKTESPF---ASLSERELQIMLMITKGQKVNEISEQLNLSP 178 + + ++A ++ L+ RE ++++++ +G+ EI+ +L +S Sbjct: 131 ESPLNQELAARLIQDLARRPGGGGNPPPAEELTAREREVLVLMARGRTNPEIARELVISR 190 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 T S+ + KL + + A GL Sbjct: 191 GTAKSHVQNIIRKLGVSDRTQAVARAFELGLIEP 224 >UniRef50_C6D0G6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=C6D0G6_PAESJ Length = 225 Score = 272 bits (698), Expect = 5e-72, Method: Composition-based stats. Identities = 62/212 (29%), Positives = 109/212 (51%), Gaps = 9/212 (4%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +LL DDH++V GI L ++VGEA G++AV+ D+VLMD++MP + Sbjct: 3 IKILLADDHQIVLKGISFFLAMQPDFELVGEAHNGKEAVEKAGELQPDIVLMDLNMPIMD 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA+ I +K+++LT + +Q GA GY+ K P ++ AIRS Y G Sbjct: 63 GIEASALIKEQHPHIKVLVLTSFADQSHIVPALQTGAIGYMLKDVEPDQLAEAIRSAYKG 122 Query: 122 QRYIASDIAQQMALSQI---------EPEKTESPFASLSERELQIMLMITKGQKVNEISE 172 + DI++ + + + +L+ REL+++ ++TKG +I++ Sbjct: 123 NIQLHPDISRALLSRPEPEPRPEPVIQHSNRDKSLEALTPRELEVLELLTKGLSNKDIAQ 182 Query: 173 QLNLSPKTVNSYRYRMFSKLNIHGDVELTHLA 204 L ++ KTV ++ + SKL++ + A Sbjct: 183 TLIVAEKTVKTHVSSILSKLDLSDRTQAALFA 214 >UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V5Y3_9FIRM Length = 223 Score = 272 bits (698), Expect = 5e-72, Method: Composition-based stats. Identities = 65/221 (29%), Positives = 119/221 (53%), Gaps = 9/221 (4%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +LL DDH L+R GI+R+L ++VVGEA G++A+ D++L+D++MPG+ Sbjct: 3 IRILLADDHALLRQGIKRVLNFEDDLEVVGEAEDGQEALARTLMLKPDILLLDINMPGLT 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GL+ +++ ++ + VKII LT+H + ++++ GA GYL K P ++ AI V G Sbjct: 63 GLDVAKQLKQARSRVKIIALTIHDSDNYVLELLKNGALGYLLKDVEPNVLIKAIHMVNEG 122 Query: 122 QRYIASDIAQQM---------ALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISE 172 ++ +A+++ + ES L+ RE+ ++ I KG +I + Sbjct: 123 NPFVYPKLAERLFGTSSISGDVGRMAKEIWDESRGERLTPREMDVLGCIAKGLSNQDIGK 182 Query: 173 QLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 L LS KTV ++ +F KL ++ + +++ + + E Sbjct: 183 ALGLSEKTVKNHLTSVFHKLKVNDRTQALVYVLKNKIVSLE 223 >UniRef50_UPI0001B502C9 two component LuxR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B502C9 Length = 229 Score = 272 bits (697), Expect = 6e-72, Method: Composition-based stats. Identities = 68/215 (31%), Positives = 120/215 (55%), Gaps = 4/215 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + VL+ DDH +VR G+R IL IKVVGE + G +AV+ R DVVLMD+ MP + Sbjct: 3 LRVLIADDHAVVRQGLRMILGLDNEIKVVGETTNGREAVRLARELCPDVVLMDLLMPVMD 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ AT +I + +V+++ LT ++ + ++AGA G+L K A ++ +A+++ +G Sbjct: 63 GVSATAEIRQDIPEVEVVALTSSLDDAMVMGAVRAGAIGFLLKNAEADDLRNAVKAAAAG 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Q +++ ++ EP L+ERE +++ M+ +G+ EI+ L + +TV Sbjct: 123 QIHVSPAAISRLMGQVREPSGP----EQLTERETEVLTMLARGKANKEIARDLRIGQQTV 178 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLS 216 +Y + +KL +H + A++ GL A L+ Sbjct: 179 KTYVSHILTKLGVHSRTQAAVYAVQSGLVPAGELT 213 >UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFI8_DESAH Length = 220 Score = 272 bits (697), Expect = 7e-72, Method: Composition-based stats. Identities = 74/211 (35%), Positives = 120/211 (56%), Gaps = 3/211 (1%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 +L+ DDH +VR G+R +LE KG++V A G AV D+V+MD++MP + G Sbjct: 4 RILIADDHAIVREGLRVLLER-KGLEVPWMAENGRQAVCLAVKFKPDIVIMDITMPNMNG 62 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 AT KI ++ ++I L++H + ++ AGA Y+ K +A E+ AI++V G+ Sbjct: 63 SIATEKIMQALPRTRVIALSMHADRRYIDRMFNAGAIAYVLKDSAFAELFDAIQAVGRGK 122 Query: 123 RYIASDIAQQMALSQIEPEKTES--PFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 YI+ IA+ +A S T PF +S RE +++ +I +G K +I+E+L +S KT Sbjct: 123 YYISPSIAKTLADSCTSAPDTPQKCPFGRISPREREVLQLIAEGVKTRQIAERLFVSIKT 182 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V ++R + +KL I LT AI+ GL + Sbjct: 183 VEAHRRNIMNKLMISSVAGLTRFAIQEGLVS 213 >UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus RepID=A9WA66_CHLAA Length = 218 Score = 272 bits (696), Expect = 8e-72, Method: Composition-based stats. Identities = 71/214 (33%), Positives = 106/214 (49%), Gaps = 8/214 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+VDD L+R GI +L I+VVG+A G +A++ + DVVLMD+ MP + Sbjct: 3 IRVLIVDDQALIRTGIATLLSRKADIEVVGQAGNGREALELVASLDPDVVLMDVMMPVMD 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATRK+A +IMLT ++ + + AGA GYL K + + +IR+V G Sbjct: 63 GVEATRKLAERGPRPAVIMLTTFHDDERVLQSIAAGARGYLLKDVDHRVLADSIRTVAGG 122 Query: 122 QRYIASDIAQQMALSQIEPEKTE--------SPFASLSERELQIMLMITKGQKVNEISEQ 173 I I Q+ T + L+ RE I+ ++ +G EI EQ Sbjct: 123 GALIHPQIIAQLLPRLASLAPTPVTASSSPSDVTSILTPRERDILRLLAQGYTNQEIGEQ 182 Query: 174 LNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRH 207 L LS TV ++ +F+KL + + A H Sbjct: 183 LALSVGTVKNHLSVIFAKLAVRDRTQAALWAREH 216 >UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QY5_SYMTH Length = 218 Score = 272 bits (696), Expect = 8e-72, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 127/211 (60%), Gaps = 4/211 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + VL+VDDH ++R G+ +L + ++V+GEAS G++A++ D+VLMD++MP + Sbjct: 1 MKVLIVDDHLMLRKGVLSVLSNT-DLEVIGEASNGQEALELVPKLKPDLVLMDINMPVLD 59 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATRK+ + D+K+++LTV + + ++AGA GYL K P+E+VS++R+ SG Sbjct: 60 GVEATRKLKQMYPDLKVVILTVSEIDKDLFEAIKAGADGYLLKNLGPEELVSSLRAAISG 119 Query: 122 QRYIASDIAQQMALSQIEPEK---TESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 + I+S +A +M +P + P LS RE++++ + + G EI+ +L ++ Sbjct: 120 EAPISSVMAAKMLKEFRQPRANTTGKQPGQQLSPREIEVLRLASTGLTYKEIAAKLYVAE 179 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 TV ++ + KL++ E AIR GL Sbjct: 180 STVKNHMRHILEKLHLRNRSEAVGYAIRTGL 210 >UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7D2_9BACL Length = 227 Score = 272 bits (696), Expect = 8e-72, Method: Composition-based stats. Identities = 65/213 (30%), Positives = 120/213 (56%), Gaps = 5/213 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWC----RTNAVDVVLMDMSM 57 I V++VDDH++VR G++ L G +V+ EA G +AV+ R D++LMD+ M Sbjct: 13 IKVMIVDDHDMVRMGLKTYLMQDPGFEVIAEAGDGREAVELLERGLREGQPDIILMDLMM 72 Query: 58 PGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRS 117 PG+ G EAT+++ D+KI++LT E+ L + ++AGA Y+ K + +E++ A++ Sbjct: 73 PGMNGAEATKEVRSRFPDMKIVILTSFLEDDLVVQAVEAGAVSYVLKTVSAEELIYALQG 132 Query: 118 VYSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 Y G + ++AQ + + + ++ERE +++L+I +G+ +I+E+L++S Sbjct: 133 AYRGMPVMTGEVAQALTRGLRQRTVQGDD-SGMTEREKEVLLLIAEGKSNKDIAEELHIS 191 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 KTV ++ + K + +L A R G Sbjct: 192 IKTVKTHVSNLLMKCELEDRTQLAIYAHRQGWV 224 >UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3 Tax=Proteobacteria RepID=Q313W8_DESDG Length = 223 Score = 272 bits (696), Expect = 8e-72, Method: Composition-based stats. Identities = 70/210 (33%), Positives = 120/210 (57%), Gaps = 3/210 (1%) Query: 4 VLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGL 63 +++ +DH L+R G++ +L+ + + V GEAS G+ AV C N ++VLMD+SMP + G+ Sbjct: 7 LIIAEDHTLLREGLKSLLQSVPHLIVTGEASDGQMAVDLCDRNQPELVLMDISMPRMDGV 66 Query: 64 EATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQR 123 +ATR I + +V++++LTVH + AGA GY+ K A+ E + A+ SV G+ Sbjct: 67 QATRLIKKRHPEVRVLVLTVHGAGEYVYAALAAGADGYVLKDASNDEFILAVESVLGGKI 126 Query: 124 YIASDIAQQMALSQ---IEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 Y++ ++ + + S + +L+ RE +I ++ +G K EI+E L +S KT Sbjct: 127 YLSPGVSDAVVKGYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREIAEMLVVSVKT 186 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 V +R + KL +H EL LA+ G+ Sbjct: 187 VEKHRSNLMQKLGVHSAAELRALALERGII 216 >UniRef50_C3JVF4 Two component transcriptional regulator, LuxR family n=2 Tax=Rhodococcus erythropolis RepID=C3JVF4_RHOER Length = 220 Score = 272 bits (696), Expect = 8e-72, Method: Composition-based stats. Identities = 64/216 (29%), Positives = 112/216 (51%), Gaps = 6/216 (2%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI+VL+ DD ++VR G L I+VVG A G +A + R DVVLMD+ MP Sbjct: 1 MIDVLIADDQQVVRQGFELFLSGHPEIRVVGHAKTGVEAYEQVRALRPDVVLMDIRMPHG 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GL ATR++ ++I++T + + + +GAAG+L K A P+E+ SA+ +V Sbjct: 61 DGLTATREVLAEFPGTRVIVITTFDLDEYVFEALDSGAAGFLLKDADPEELSSAVLTVAE 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFAS------LSERELQIMLMITKGQKVNEISEQL 174 G ++ + ++ + + A LS RE+ ++ ++++G N+I++ L Sbjct: 121 GGSVLSPRLTSRLIVEFARRKPAPMSTARSGSDHGLSAREMDVVQLLSQGLGNNDIADSL 180 Query: 175 NLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 +L TV S+ + KL + V++ A R+ + Sbjct: 181 SLEQSTVKSHISNICKKLQVRTRVQIVIWAYRNNVI 216 >UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacillus RepID=C3BET8_9BACI Length = 216 Score = 272 bits (696), Expect = 8e-72, Method: Composition-based stats. Identities = 62/214 (28%), Positives = 110/214 (51%), Gaps = 7/214 (3%) Query: 5 LLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGLE 64 ++VDD L+R G+ +L ++VVG A+ G++ V+ +++LMD+ MP I G+E Sbjct: 1 MIVDDQSLIRDGLAMLLNLRSELEVVGTANDGDEVVRIAEQLQPEIILMDIRMPRINGVE 60 Query: 65 ATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQRY 124 TR I D+K++MLT ++ L + ++ GA+GYL K +V AI +V++G Sbjct: 61 GTRLIRERFPDMKVLMLTTFNDSELIFEALEQGASGYLLKDMETDAIVQAILTVHAGGAV 120 Query: 125 IASDIAQQMALSQIE-------PEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 + DI Q+ + L+ERE+ ++ I G EI+E+L ++ Sbjct: 121 LPQDITAQIVKELKRTKVVEISGQNQPKQVEQLTEREIDVLREIGLGLNNKEIAEKLFIT 180 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 TV ++ + SKL + + A+R+G+ Sbjct: 181 EGTVKNHVSNLISKLELRDRTQAAIYAVRYGITT 214 >UniRef50_D1BX47 Two component transcriptional regulator, LuxR family n=14 Tax=Actinomycetales RepID=D1BX47_XYLCX Length = 234 Score = 271 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 64/224 (28%), Positives = 120/224 (53%), Gaps = 12/224 (5%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTN--AVDVVLMDMSMPG 59 I V LVDD ++VRAG R +++ + VV EA G +A++ DVVLMD+ MP Sbjct: 10 IRVALVDDQQMVRAGFRMVIDSQPDMTVVAEAGDGVEALRVLGALPVRADVVLMDVRMPR 69 Query: 60 IGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVY 119 + GL AT + ++++LT + + +++GA+G++ K A P+E++ AIR+V+ Sbjct: 70 MDGLTATAALTSGADAPRVVVLTTFDIDEYVLEAIRSGASGFMLKDAPPEEMLGAIRTVH 129 Query: 120 SGQRYIASDIAQQMALSQIEPEKTESP----------FASLSERELQIMLMITKGQKVNE 169 +G IA +++ + T +P A+L++RE +++ ++ +G+ E Sbjct: 130 AGDAVIAPSSTRRLLEHLVTALPTPAPDTPPSPAHAALATLTDREREVLELMARGRSNTE 189 Query: 170 ISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 I+ L ++ TV ++ R+ +KL+ V+ LA G+ + Sbjct: 190 IAADLFVAEATVKTHVGRILAKLDARDRVQAVVLAYETGVVHPG 233 >UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR family n=10 Tax=Bacteria RepID=Q1IXN1_DEIGD Length = 221 Score = 271 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 67/214 (31%), Positives = 111/214 (51%), Gaps = 4/214 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + VLLVDDH +VR G+R L I+VVGEA+ GE+A+ DVV+MD+ MP + Sbjct: 10 VRVLLVDDHAVVRQGLRLFLSLDSQIEVVGEAANGEEALAAAERLHPDVVIMDLMMPVMD 69 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++ATR + R D ++I LT E + AGA GY+ K A+ + AI + G Sbjct: 70 GIQATRLLRRQHPDTEVIALTSTLEEHKVNGAIDAGAMGYMLKDASSDTLADAIHAAARG 129 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + + + A+++ PE +L+ +E+ ++ +I +G +I+ ++ TV Sbjct: 130 EVRLHPEAARRLVRDFRTPEMR----ETLTPKEVIVLQLIARGYSNRDIARDQGVTEATV 185 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETL 215 ++ R+ KL + + A+RHGL E Sbjct: 186 KTHVSRLLGKLGLESRTQAALYALRHGLARLEET 219 >UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1R6_THERP Length = 221 Score = 271 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 85/215 (39%), Positives = 122/215 (56%), Gaps = 4/215 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLL DDH +VR G+R +LE I VVGEA ++AV+ RT DV ++D+SMPG Sbjct: 6 IRVLLADDHPIVRVGLRALLEAEPDIAVVGEAGTADEAVELARTLQPDVAVLDISMPG-N 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLEA R+IA + ++LTVH E V+QAG +GY+ K + ++V AIR V G Sbjct: 65 GLEALRRIASLGLPTRTLILTVHAEERYLLPVLQAGGSGYVRKSSLHTDLVEAIRLVARG 124 Query: 122 QRYIASDIAQQMALSQ---IEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 + +I A+ + + + P LSERE +++ + G EI++QL LSP Sbjct: 125 EVFIDQAAARTLLQGYLDHARTGEVQDPAQLLSEREREVLRLTAAGYTAQEIADQLFLSP 184 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 KTV +YR+R+ KL EL A+R GL + + Sbjct: 185 KTVETYRHRVMQKLGFSRRSELVRFALRIGLLDPQ 219 >UniRef50_B2J8J5 Two component transcriptional regulator, LuxR family n=3 Tax=Cyanobacteria RepID=B2J8J5_NOSP7 Length = 211 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 67/211 (31%), Positives = 110/211 (52%), Gaps = 8/211 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +LL DDH ++ + L+ + V+G A G +A++ + DV LMD+ MP + Sbjct: 9 IRILLADDHPILGQALTMFLQCESDMTVIGHAGDGREALELFHQHQPDVALMDLRMPKME 68 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G +A I +I++LT + + ++AGA GYL KGA P E++ AIR+V+ G Sbjct: 69 GADAIAAICAKFKHARIVVLTTFDGDEDIYRGLRAGAKGYLLKGAEPNELLDAIRTVHKG 128 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Q+YI IA ++A LS+REL+++ +I KG+ +IS LN++ TV Sbjct: 129 QKYIPPTIAAKLAERMSS--------EELSDRELEVLRLIAKGKNNQQISNVLNIAESTV 180 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 + +F KLN+ + A+ G+ Sbjct: 181 RFHTNNIFGKLNVSDRTQALVTALNRGIVRL 211 >UniRef50_C1A9U5 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9U5_GEMAT Length = 223 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 66/211 (31%), Positives = 118/211 (55%), Gaps = 1/211 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+ DDH LVR G+R +L+ GI+VVGEAS G AV + DVV++D++MP Sbjct: 11 IRVLIADDHALVREGLRYVLDADPGIEVVGEASNGRTAVDLALQHVPDVVVLDITMPEES 70 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GL+A ++ + D ++++L++H + + M+ G GYL K +A +E+ +AIR+V++G Sbjct: 71 GLKAAARLREALPDTRVLLLSMHDQGEYVREGMRIGTHGYLLKDSAGEELRAAIRAVHAG 130 Query: 122 QRYIASDIAQQMAL-SQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 + + + +++ + + L+ RE ++ + +G I+ +L +S +T Sbjct: 131 GTFFSPAVVRRLTSTEVVSEGAPAAQLDLLTPRERDVLAGVARGLTNKAIAAELGISRRT 190 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V ++R + KL IH LT A+ G+ Sbjct: 191 VEAHRESLMRKLQIHSVAGLTRFALETGIIT 221 >UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y661_9BACT Length = 216 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 76/213 (35%), Positives = 122/213 (57%), Gaps = 2/213 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLL DDHE+ G+R +L GI++ G A G +AV DV LMDM+MP + Sbjct: 3 IRVLLADDHEMFLEGLRELLGKADGIELAGLARDGAEAVAAAERLQPDVALMDMTMPRLN 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++AT+KIA + K+++L++H + L + ++AGA GY+ K + QE+ AI++V +G Sbjct: 63 GIQATQKIAAGSPGTKVLVLSMHGDKNLIVESLKAGARGYVLKECSSQELCLAIQTVANG 122 Query: 122 QRYIASDIAQQMALSQIE--PEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 Q Y+ I + + + + LSEREL ++ ++ KG +I+EQL++S Sbjct: 123 QYYLTPAILSTLIGDYLRLTENEEQGSDCPLSERELDVLKLLVKGCNAKQIAEQLSISKN 182 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 TV+++R + KL + ELT AIR G + Sbjct: 183 TVDTHRRHILDKLGCNSMAELTRYAIREGYLDL 215 >UniRef50_Q5WI37 Two-component response regulator n=5 Tax=Bacillaceae RepID=Q5WI37_BACSK Length = 210 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 115/210 (54%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VLL +D +VR G++ ++E + IKV GEA G A++ C T+ DV ++D+ MP + Sbjct: 1 MIKVLLAEDQVMVRQGLKAMIETDEDIKVTGEADDGRKALRLCETHVFDVAILDIRMPEM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EA + + +KI+MLT ++ + ++ G GY+ K + ++ +I+S + Sbjct: 61 DGIEAAKMMRLRYPKMKILMLTTFDDHQYVVESLKLGVNGYMLKNGDTESLIRSIKSTIN 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G + +A ++ + ++ ++ S SL+ RE I+ I +G EI+E+L LS T Sbjct: 121 GGLSLEDQVAAKVVPTLLQNQEEPSIDPSLTPRERAILTCIGEGLNNKEIAERLGLSVGT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 V + +F KL + +L AIRH L Sbjct: 181 VKNQTSHIFDKLALRDRTQLAIYAIRHRLV 210 >UniRef50_C4DCK3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=3 Tax=Actinomycetales RepID=C4DCK3_9ACTO Length = 214 Score = 270 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 112/210 (53%), Gaps = 2/210 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VLLVDD L+RAG+R + E I+VVGEA G+ AV+ D+VLMD+ MPG+ Sbjct: 1 MIRVLLVDDQRLIRAGLRMLCEPAADIEVVGEADGGQAAVRLAGELCPDLVLMDLRMPGM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+ AT++I +++ LT ++ + AGA G+L K +P E++ AIR Sbjct: 61 DGITATQRILAERPSTRVVALTTFDDDDHLYPALAAGACGFLVKDTSPNELLEAIRKAAD 120 Query: 121 GQRYIASDIAQQMALSQIEPEK--TESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 G ++ + +++ S + + L+ RE +++ ++ G +I+E+L+L Sbjct: 121 GDTPFSAGVVKRIVDSAVRARASVPTATLPKLTTREREVLALVGAGYANVDIAERLHLGV 180 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHG 208 TV ++ + +K V L LA+R G Sbjct: 181 TTVKTHIASLMTKTGCSNRVRLAVLAVRSG 210 >UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTE0_9BACI Length = 219 Score = 270 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 70/213 (32%), Positives = 121/213 (56%), Gaps = 4/213 (1%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 ++LVDDH + R+G++ IL V+ EA GE A++ D+++MD+SMPG+ G Sbjct: 4 RIMLVDDHPVFRSGLKHILCTEADYHVIAEADDGESAIEMAAEANPDIIIMDISMPGLDG 63 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 +E TR+I R D++I+MLT++ + + + AGA+GY+ K A E+V A++ V +G+ Sbjct: 64 IEVTREIKRKIPDIRILMLTMYADEAFLKESLDAGASGYVLKRAVDTELVHAVKLVMNGE 123 Query: 123 RYIASDIAQQMALSQIEPEKTESPFA----SLSERELQIMLMITKGQKVNEISEQLNLSP 178 YI + ++ + + SP + LS+RE +++ I G EIS +L +S Sbjct: 124 HYIYPTLIPKLYHANQPQQDAVSPDSNQAVELSQREQEVLKYIALGYTQKEISTELFISI 183 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 KTV++Y+ R+ K+ L A++H + N Sbjct: 184 KTVDTYKKRVMEKIGSKKKSALVRYALKHNIIN 216 >UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR family n=29 Tax=Alphaproteobacteria RepID=Q1GIA7_SILST Length = 233 Score = 270 bits (691), Expect = 3e-71, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 118/210 (56%), Gaps = 6/210 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+VDDH +V GI+ ILE I+VVG S G +A+ DV+LMD++MP +G Sbjct: 24 IRVLIVDDHPMVAEGIQSILESYGDIEVVGAVSSGREAIARAEALVPDVILMDLNMPDVG 83 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GL AT I ++++++L++H + GA GY+ K P+E+ +AI +V G Sbjct: 84 GLSATEIIQERCPEIRVLILSMHDSPEYITTALSHGAVGYVLKDVQPEEIKTAIDAVMRG 143 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 ++Y+ + A + ++++ +L+ RE I+L + +G+ E+++ L++S +TV Sbjct: 144 EQYLCTGAAGSL------SPQSQTSREALTGREQTILLELAQGKSNKEVAQALDISVRTV 197 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++R + KL I LT A+ HG+ Sbjct: 198 ETHRKNIKRKLGISSTAGLTRYALEHGVLQ 227 >UniRef50_B1ZY58 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=B1ZY58_OPITP Length = 223 Score = 270 bits (691), Expect = 3e-71, Method: Composition-based stats. Identities = 68/212 (32%), Positives = 115/212 (54%), Gaps = 8/212 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+VDDH +R G+ ++ G+ VV EAS GE+A++ DVVLMD+ MPG+G Sbjct: 20 IRVLVVDDHPPMRVGLVALIRSQPGMDVVAEASDGEEAIEIYDDLQPDVVLMDLRMPGMG 79 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA I + + ++I+L+ + + + +Q+GA YL K +E+ S +R+VY+G Sbjct: 80 GVEAILAIRKKAPEARVIVLSTYDWDEDIHRALQSGAKSYLLKDMPIEEIASTVRAVYAG 139 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + +A+++ L+ERE ++ + KG+ EI+ L +S TV Sbjct: 140 DTSLPRSVAERLTERAQR--------EQLTERERDVLESLIKGRSNKEIASSLCISEDTV 191 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 S+ +F+KL + AIRHG+ + + Sbjct: 192 KSHLKTLFAKLRVRDRTGAAIEAIRHGIVHLK 223 >UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VH7_CYTH3 Length = 220 Score = 270 bits (691), Expect = 3e-71, Method: Composition-based stats. Identities = 74/217 (34%), Positives = 120/217 (55%), Gaps = 8/217 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 IN+LLVDDH +VR GI+ L+D K +VGEA+ G D ++ + DVV+MD++MP + Sbjct: 4 INILLVDDHTIVRDGIKATLKDQKNFHIVGEAANGLDGIEAVKQLKPDVVIMDITMPEMS 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA I++ D K+++L++H K ++AGA GYL K E + AI +VY+G Sbjct: 64 GIEAADVISKKYPDSKVLILSMHDNETYILKSVEAGAYGYLLKDVDKDEFIKAITAVYNG 123 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFA--------SLSERELQIMLMITKGQKVNEISEQ 173 +Y + I+ + + K L++RE I+ MIT G+ EI++ Sbjct: 124 DKYFNTAISSVLVSGYLSKVKQTDSIQSGYSNDEYELTKREKGILKMITDGKNNREIADG 183 Query: 174 LNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 L +S +T+ ++R + KL + VEL +AI + Sbjct: 184 LGISIRTIETHRANIMKKLKVKNAVELVRIAIDEKIV 220 >UniRef50_C5VAN3 Two component transcriptional regulator, LuxR family n=2 Tax=Corynebacterium matruchotii RepID=C5VAN3_9CORY Length = 215 Score = 269 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 66/212 (31%), Positives = 110/212 (51%), Gaps = 1/212 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 +I V++ DD L+RAG+ IL+ I+V+GEAS GE+A+ + DVV MD+ MPG Sbjct: 4 LIRVVIADDEALIRAGLATILQASGDIEVIGEASTGEEALTVAQRLQPDVVCMDIRMPGG 63 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GLEATR+I + +I++T + ++AGA G L K ++ ++V +R Sbjct: 64 DGLEATRRIQQLEPAPAVIVITTFDMDEYVFGALEAGACGILLKDSSMTDLVEGVRRAAL 123 Query: 121 GQRYIASDIAQQMALSQIEPEKT-ESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 G+ + + + +++ + S L+ REL + + +G NEI+ L L P Sbjct: 124 GEGLVDASLTRRVIAEFTRRKSIFTSSSEVLTPRELDCVAQLCQGMSNNEIATTLFLEPS 183 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 TV ++ +K H V+L A R+G+ Sbjct: 184 TVKTHLSSAMAKTGTHNRVQLVIWAFRNGVVE 215 >UniRef50_C5C7H0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=9 Tax=Bacteria RepID=C5C7H0_MICLC Length = 230 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 69/221 (31%), Positives = 119/221 (53%), Gaps = 11/221 (4%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + V LVDD L+R+G+ +++ + VV EA G +AV DVVLMD+ MP + Sbjct: 9 VRVALVDDQALIRSGLAMLVDSQPDLTVVAEAGSGREAVASVSVAGADVVLMDVRMPEMD 68 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR + R ++++LT + ++AGA+G+L K A P+E+++AIR+V+ G Sbjct: 69 GIEATRALLRRPDAPRVVVLTTFDLDEYAFDAIEAGASGFLLKDAPPEELLAAIRTVHRG 128 Query: 122 QRYIASDIAQQMALSQIEP-----------EKTESPFASLSERELQIMLMITKGQKVNEI 170 IA +++ E+ ++ ASL+ RE ++++++ +G EI Sbjct: 129 DAVIAPSTTRRLLTHMAPRLRSDQVRSAECEEQQAAVASLTPREREVLVLMAQGAANLEI 188 Query: 171 SEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 + +L LS TV ++ R+ +KL V+ +A R GL Sbjct: 189 AAELVLSEATVKTHVGRVLAKLGARDRVQAVLIAHRAGLVQ 229 >UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVU6_9BACT Length = 216 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 71/210 (33%), Positives = 116/210 (55%), Gaps = 1/210 (0%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 ++LVDDH L R+G+R +L+ GI+VVGEAS GE+ + DVV MD +MPG+ G Sbjct: 5 RIILVDDHSLFRSGMRGLLDRYDGIRVVGEASTGEEFLAMLPATEADVVFMDFAMPGMNG 64 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 E T K +K+I L++ + ++++QAGA G+L K + EV+ AI +V +G Sbjct: 65 AETTEKALALEPGLKVITLSMFGDENYYSRMVQAGAKGFLMKDSPMDEVLRAIETVAAGG 124 Query: 123 RYIASDIAQQMALSQIEP-EKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Y ++ + +A E LS RE++I++ + +G EI+++L +S +TV Sbjct: 125 TYFCEEVLRSLASRMQTAVSGYEGSDERLSTREIEILVCVCRGLSNQEIADELFISKRTV 184 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 + +R + K L A+RHGL + Sbjct: 185 DKHRANILEKTGCKNTASLVVYAVRHGLVD 214 >UniRef50_C4ZEG3 Two-component response regulator (Extracellular proteinase response regulator) n=3 Tax=Bacteria RepID=C4ZEG3_EUBR3 Length = 214 Score = 269 bits (689), Expect = 6e-71, Method: Composition-based stats. Identities = 61/210 (29%), Positives = 117/210 (55%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 IN+++ DDH ++R G++ +LE IKV+ EA GED + +T DV+L+D++MP + Sbjct: 3 INIMITDDHSMIREGLKNLLELDGDIKVIAEAENGEDCLDKLKTFRPDVLLLDINMPKMN 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLE + + + VK+++LTVH E K + G GY+ K + E+ AI ++ G Sbjct: 63 GLEVLKALKDRKSKVKVLVLTVHNETEYLMKAVDIGINGYVLKDSESAELKKAIFTIADG 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + YI + + I+ + E +L++RE++++ + G+ +I++++ +S +TV Sbjct: 123 ETYIQPSLIPALNSKMIQKNEDELKIDALTKREMEVLKEMAVGKFNRDIAKEMKISERTV 182 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++ +F KL + + AIR+ + Sbjct: 183 KNHISSIFKKLEVTDRTQAAVFAIRNNIIQ 212 >UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomycetales RepID=A4XCA4_SALTO Length = 235 Score = 268 bits (688), Expect = 7e-71, Method: Composition-based stats. Identities = 72/215 (33%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 +I VL+VDD LVR+ +R ++ ++ + + GEA GE+AV+ R DVVLMD+ MPG+ Sbjct: 2 IIEVLVVDDQPLVRSALRMVVAEVDDMVIAGEAETGEEAVRLTRELKPDVVLMDLRMPGM 61 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GG+EAT +I R + + ++++LT E+ +QAGAAG+L K + +++ A+R+V Sbjct: 62 GGIEATGQIVRLSPETRVLVLTTFDEDDHVFGALQAGAAGFLIKNMSLDDILDAVRTVAH 121 Query: 121 GQRYIASDIAQQMALSQIEPEKTE----SPFASLSERELQIMLMITKGQKVNEISEQLNL 176 G +A + +++ ++ P + ++ERE +++ ++ +G +EI+++L L Sbjct: 122 GNGLLAPSVTRRLIKHVVDTRTAPTVPRRPLSGITEREREVLTLVGRGLSNSEIADELRL 181 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 S TV +Y R+ SKL V L A GL Sbjct: 182 SHATVKTYITRLLSKLGARDRVHLVIAAYEAGLAT 216 >UniRef50_B1M5J4 Two component transcriptional regulator, LuxR family n=7 Tax=Bacteria RepID=B1M5J4_METRJ Length = 222 Score = 268 bits (687), Expect = 8e-71, Method: Composition-based stats. Identities = 73/214 (34%), Positives = 119/214 (55%), Gaps = 3/214 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V L DDH +V AGIR +L I++VGEA+ G +A+ DV ++D+SMPG+ Sbjct: 5 IRVALADDHPIVLAGIRTLLNADPEIELVGEATSGSEALPMIHAADPDVAVVDVSMPGLN 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLE T ++A S ++++LTVH + +++AGA GYL K +A ++++ A+R+V +G Sbjct: 65 GLELTERVAGSCPRTRVLVLTVHEDAAYVQPLLKAGARGYLLKRSAAEDLLRAVRAVAAG 124 Query: 122 QRYIASDIAQQMALSQIEP---EKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 Y+ +A P TE +LS RE ++ +I +G EI+ + +LS Sbjct: 125 GIYLDPSVASHAMAHPATPTQGGDTEPSAEALSPRETDVLRLIAQGFSNKEIARRFDLSV 184 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 K++ +Y+ R KL + E+ A HG +A Sbjct: 185 KSIETYKARAAEKLGLRTRAEIIRYAAAHGWLDA 218 >UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmicutes RepID=VRAR_STAA1 Length = 209 Score = 268 bits (687), Expect = 8e-71, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 110/210 (52%), Gaps = 3/210 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL VDDHE+VR GI L I+VVGE + G++A+ D++LMD+ M + Sbjct: 3 IKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKPDLILMDLLMEDMD 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EAT +I + +K++MLT E+ + + AG Y+ K + +++ A+R G Sbjct: 63 GVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTSRG 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + ++ +M + + + L+ERE++I+L+I KG EI+ +++ KTV Sbjct: 123 ESVFEPEVLVKMRNRMKKRAE---LYEMLTEREMEILLLIAKGYSNQEIASASHITIKTV 179 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++ + SKL + + A +H L Sbjct: 180 KTHVSNILSKLEVQDRTQAVIYAFQHNLIQ 209 >UniRef50_A5URU4 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexi (class) RepID=A5URU4_ROSS1 Length = 242 Score = 268 bits (687), Expect = 8e-71, Method: Composition-based stats. Identities = 74/223 (33%), Positives = 122/223 (54%), Gaps = 11/223 (4%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL++DDH L R GIR LE+ ++VVGEA G++A+K DVVL+D+++PG+ Sbjct: 5 IRVLIIDDHPLFRQGIRWSLEEAGDMEVVGEAENGQEAIKLAERLVPDVVLVDINLPGLN 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLE R I R + +I+++V+ ++ + ++ GAA Y SK P+++V IR V G Sbjct: 65 GLEVARVIKRREPRIGLIVISVYEDDDQLFQAIKVGAAAYSSKDVHPRDLVRMIREVARG 124 Query: 122 QRYIA------SDIAQQMALSQI-----EPEKTESPFASLSERELQIMLMITKGQKVNEI 170 + I +A ++ E E+T + FA L+ RE++I+ I +G EI Sbjct: 125 KYLINDSVIAKPHVATRVLHQFRELAATEDERTSALFAPLTSREIEILDCIARGLSNKEI 184 Query: 171 SEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 + QL++S +TV ++ + SKL ++ AI+ G Sbjct: 185 ASQLSISGQTVKNHITSILSKLQVNDRTMAVIYAIQRGWIRMG 227 >UniRef50_C1RMQ2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Actinomycetales RepID=C1RMQ2_9CELL Length = 254 Score = 268 bits (687), Expect = 9e-71, Method: Composition-based stats. Identities = 67/214 (31%), Positives = 111/214 (51%), Gaps = 5/214 (2%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 VL+VDD L+R GIR +L G++VVGEA G AV+ R DV LMD+ MPG+ G Sbjct: 11 TVLVVDDQPLIRQGIRAVLRGQPGVEVVGEAHDGHSAVRTARRLRPDVTLMDVQMPGMDG 70 Query: 63 LEATRKIAR-STADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 +EATR I +++LT++ ++ + ++AGA G + K A E+V+AI + +G Sbjct: 71 VEATRVICADDDPPTSVVVLTMYDQDEHVFEALRAGARGLVLKDAPTSELVAAIHAAAAG 130 Query: 122 QRYIASDIAQQMALSQIEPE----KTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 ++ + +++ + A L+ RE + ++ +G E +E+L L Sbjct: 131 DSLLSPSVTRRLIEEFARRPTVRMEATDGPAELTARERDVFRLLVQGLSTAEAAERLTLG 190 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 TV S+ ++ KL + V+ A HGL + Sbjct: 191 DSTVKSHVQSLYRKLGVRDRVQAVIYAYEHGLVD 224 >UniRef50_A4FAA4 Two component system response regulator n=2 Tax=Actinomycetales RepID=A4FAA4_SACEN Length = 218 Score = 268 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 69/218 (31%), Positives = 118/218 (54%), Gaps = 5/218 (2%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 M +LL +D ++VRAG+R+ILE + V+ EA G +AV R +A DVV+MD+ MP + Sbjct: 1 MTRILLAEDEQIVRAGLRKILESAGDLTVIAEAGDGAEAVTGVRRHAPDVVVMDIQMPRL 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GL ATR+I A KI++LT+ + ++AGA+G+L K A P+E+++AIR + Sbjct: 61 DGLAATRQITSLPAPPKILILTMFDFDANVYSAIEAGASGFLLKDARPEELINAIRVIAD 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESP-----FASLSERELQIMLMITKGQKVNEISEQLN 175 G ++ + +++ + P L+ RE QI+ ++ G I++ L Sbjct: 121 GDAMLSPSVTRRLLSHFADRNSPRGPTAVRGLDELTPRERQILSLVGGGLSNASIAKTLG 180 Query: 176 LSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 + TV + R+ KL+ V+L +A G+ + + Sbjct: 181 ATESTVKGHVSRLLMKLDCENRVQLALIAHNAGIASEQ 218 >UniRef50_Q1H354 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=Q1H354_METFK Length = 213 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 82/210 (39%), Positives = 129/210 (61%), Gaps = 2/210 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I ++LVDDHE+VR+G+RR+LE G++V+ EA GE A ++ + DV++MDMSMPG+G Sbjct: 5 IRIMLVDDHEVVRSGLRRLLEQNDGVEVIAEADSGEQAYQFYGEHMPDVIVMDMSMPGMG 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLEA R+I ++I+ ++H ++ + AGA Y++K A ++V A+R V G Sbjct: 65 GLEALRRIIARYPQARVIIFSMHENAAFASQALGAGARAYVAKSGAADDLVQAVREVAQG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + Y++ IAQQ+AL + + LS RE ++ ++ G+ V EIS L +S KTV Sbjct: 125 KGYLSPGIAQQIALQTLSGSDDPTRL--LSAREFEVFRLLAAGKGVEEISTILKISQKTV 182 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 +Y+ + KL I +EL LAI+HG+ Sbjct: 183 ANYQTLLKQKLGITSPIELVRLAIKHGVIE 212 >UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR family n=30 Tax=root RepID=A1WBJ7_ACISJ Length = 239 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 133/211 (63%), Gaps = 1/211 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI + +VDDH +VRAG+R+ L + ++VVGEAS G +A+ R + +DV++MD+SMPG Sbjct: 30 MIKIGIVDDHAIVRAGLRQFLSEHVDLRVVGEASNGREAIDLVRVHEIDVLVMDLSMPGQ 89 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GL+A + D+ I++L+ + E +++ GA+GYL+K P+E+V AIR++ Sbjct: 90 SGLDALAMLRAKAPDMGILILSGYPEEHYAINLIRQGASGYLNKECEPKEIVEAIRTIAL 149 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+RY+ +A +A + P LSERE Q+ L + KG+ +I++ L+LS KT Sbjct: 150 GRRYLTPSVADLLAQQLNRKDDAP-PHEQLSEREFQVFLKLAKGETAGDIAKSLSLSVKT 208 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V++YR R+ K+ + + +LT+ A+++ L + Sbjct: 209 VSTYRTRLMEKMGLSSNSDLTYYALKNKLID 239 >UniRef50_D1BGN7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=4 Tax=Actinomycetales RepID=D1BGN7_SANKS Length = 258 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 71/218 (32%), Positives = 118/218 (54%), Gaps = 7/218 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLLVDD EL R+GI I++ G++VVG+A+ G +AV+ + DVVLMD+ MP + Sbjct: 34 IRVLLVDDQELFRSGIAVIVDAQDGLEVVGQAADGSEAVRMVDDLSPDVVLMDVRMPELD 93 Query: 62 GLEATRKI------ARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAI 115 G+EATR+I A V++I+LT + A ++ GA+G+L K A P + AI Sbjct: 94 GVEATRQIFAPARAASRAGPVRVIVLTTFDLDDRAAAAIRYGASGFLLKDATPAMLRDAI 153 Query: 116 RSVYSGQRYIAS-DIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQL 174 R+V++G +A D++ + + L+ +E +++ + G EI+ + Sbjct: 154 RTVHAGNAVLAPDDLSTLLDGRFRARRPSPPGLEDLTPKEREVLAAVAAGLNNAEIARRA 213 Query: 175 NLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 +S TV ++ + KL + V++ LA HGL + Sbjct: 214 FVSESTVKTHVGAVLRKLGLRDRVQVVVLAHEHGLVDP 251 >UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NIZ3_ROSCS Length = 230 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 74/211 (35%), Positives = 118/211 (55%), Gaps = 2/211 (0%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 VL+VDDHEL RAG+ +L GI+VVGEA G A+ + + VD+V+MD+ MP I G Sbjct: 15 RVLIVDDHELARAGLAAVLACEPGIEVVGEADNGAAALDFVARHPVDLVMMDLQMPVIDG 74 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 +EATR+I + IIM+TV + + ++AG AGYL K A+ +E++ A+R V G+ Sbjct: 75 IEATRRIKALHPAIGIIMVTVQAKPDALMEALRAGVAGYLLKDASRREIIGAVRQVLRGE 134 Query: 123 RYIASDIAQQMALSQIEPEKTES--PFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 ++ D+ Q T+ P L+ RE Q++ ++ +G+ EI+ +L +SP T Sbjct: 135 AFLNPDLVLQTLRRLAHATPTDDATPIEPLTPREQQVLRLLMQGKTNREIARELIISPGT 194 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V + + +KL + + A+ GL Sbjct: 195 VKVHVEHIIAKLGVSDRTQAAVRALELGLVR 225 >UniRef50_A1WT06 Two component transcriptional regulator, LuxR family n=1 Tax=Halorhodospira halophila SL1 RepID=A1WT06_HALHL Length = 216 Score = 267 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 97/214 (45%), Positives = 140/214 (65%), Gaps = 1/214 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI V+L DDH L+R I +L DI I++V A E AV R DVVLMD+ MPG+ Sbjct: 1 MIRVVLADDHRLIRQAIDGMLRDIPDIQIVAHAENAEHAVAAVREQEPDVVLMDLQMPGM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GG+EA R++ RS V +I LTV+ P PA ++AGA GY+ KGA E++ AIRSVY Sbjct: 61 GGVEAIRRLYRSHPKVGVIALTVYQSGPYPAHALRAGAKGYVHKGADRDELIEAIRSVYL 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+RYI ++A+ +AL+ ++ ESPF L+ RE ++++ I GQ+ I++ L LSPKT Sbjct: 121 GRRYICHEVARHVALNSLDGTG-ESPFDHLTPREFEVLMRILNGQRGTSIAKDLCLSPKT 179 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 V++YR R+F +L + D +LT +AI +GL A++ Sbjct: 180 VSTYRSRIFERLGVRNDAQLTRIAIDYGLLEAKS 213 >UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR family n=89 Tax=Bacteria RepID=C7Q6M6_CATAD Length = 225 Score = 267 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 63/214 (29%), Positives = 118/214 (55%), Gaps = 1/214 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+ DDH +VR G+R LE +GI+V GEA+ G + + DV+L+D+ MPG+ Sbjct: 8 IRVLIADDHRMVRQGLRTFLELQEGIEVAGEAADGAECAERAAELEPDVILLDLVMPGVD 67 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ A + + + +++++T T+ + ++AGA GY+ K P + +A+RSV++G Sbjct: 68 GVGAMELLREAGSTARVLVVTSFTDRRMIIPAIRAGARGYVYKDVDPAALAAAVRSVHAG 127 Query: 122 QRYIASDIAQQMALSQIEPEKTESP-FASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 + ++A + S + P +L+ RE +++++I +G+ EI+ L L+ KT Sbjct: 128 HVLLEPEVATALLDSGSNGAADQGPQAPALTAREREVLVLIAQGRANREIARALVLAEKT 187 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 V ++ + KL + + A+RHG+ + Sbjct: 188 VKTHVSNILMKLGVADRTQAALWAVRHGIAPEDQ 221 >UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04VJ6_LEPBJ Length = 221 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 61/217 (28%), Positives = 113/217 (52%), Gaps = 9/217 (4%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 + LVDDH ++R G++ IL ++ GE+ E A+ D+V+ D+SMPG+ G Sbjct: 7 KIFLVDDHAILREGLKMILSGQ--FEICGESGDAEKALDQIGKLNPDLVITDISMPGLSG 64 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 ++ + + + +++ I+L+ H K+++ G GY+ K A +++ AI +V+ G+ Sbjct: 65 IDLVKNLRKQYPNIRTIILSRHDNREYVQKLLELGINGYVLKDDAGNDLLRAIEAVHKGE 124 Query: 123 RYIASDIAQQMALSQI-------EPEKTESPFASLSERELQIMLMITKGQKVNEISEQLN 175 Y++ I + E + + F+ LS+RE +I+ ++ +G I + L Sbjct: 125 TYLSPGITAHFLSGFVGSGKPGEENQDAKKAFSVLSDREREILKLVAEGNSNESIGKILG 184 Query: 176 LSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 +SP TV +R + KLN+H +L AIR GL + Sbjct: 185 ISPATVKVHRANIMKKLNLHKVADLVMYAIRAGLIES 221 >UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67MG8_SYMTH Length = 197 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 67/197 (34%), Positives = 109/197 (55%), Gaps = 4/197 (2%) Query: 20 ILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGLEATRKIARSTADVKII 79 +L+ +++VGEA GE+AV+ + DVV+MD+S+P + G+EATR I + + ++I Sbjct: 1 MLQSEPDLELVGEAGRGEEAVELTKALKPDVVIMDISLPDMSGIEATRLIKEAVPETRVI 60 Query: 80 MLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQRYIASDIAQQMALSQIE 139 LT+H E P + ++AGA Y+ K +A ++V AIR+V GQ + + + + + Sbjct: 61 GLTMHEEEPFVLEFLRAGADAYIVKRSAAADLVGAIRAVMEGQAVLDPAVTRAVVEGYVS 120 Query: 140 PE----KTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIH 195 L+ RE +I+++I +G EI+ +L +S KTV ++R M KL IH Sbjct: 121 RPGRAVGQPEEPCPLTPREREILVLIAEGLTNAEIARRLYISEKTVQTHRSNMLDKLGIH 180 Query: 196 GDVELTHLAIRHGLCNA 212 EL AIR GL Sbjct: 181 DRTELVRYAIRQGLVEP 197 >UniRef50_C6XAP6 Two component transcriptional regulator, LuxR family n=3 Tax=cellular organisms RepID=C6XAP6_METSD Length = 214 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 80/212 (37%), Positives = 127/212 (59%), Gaps = 2/212 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 +I VLLVDDH +VR+G+ R+LE GIKVV EA GE A + DV +MD+SMPG+ Sbjct: 5 IIRVLLVDDHTVVRSGLCRLLEQHSGIKVVAEAESGEQAYQVFGEYLPDVTVMDLSMPGM 64 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GGLEA R+I ++++ ++H + +++GA GY++K + E+V A+ V Sbjct: 65 GGLEAMRRILARYRTARVLIFSMHENAAFAMQTLKSGARGYVAKTGSFDELVKAVVEVAR 124 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+ YI++ IAQ++AL + + + LS RE ++ + +G+ EI+E L +S KT Sbjct: 125 GKSYISTSIAQKIALQTVIGDG--DLISQLSPREFEVFRLFAEGKNAEEIAEVLKISQKT 182 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 V +Y + KL + VE+ AI+HGL ++ Sbjct: 183 VANYHTLVKQKLGLSNPVEMVRFAIKHGLIDS 214 >UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZNU7_THASP Length = 220 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 66/208 (31%), Positives = 120/208 (57%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +LL DDH++ R +R +L ++VV EA+ GE+ + VD+V MD++MPG+ Sbjct: 3 LRILLADDHQMFRHALRALLARDPELEVVAEAASGEEVLAIADAQPVDLVCMDIAMPGMD 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR++ +++I L+ + ++ AGA GY++KG A E++ AIR+V G Sbjct: 63 GIEATRRLLARHPALRVIGLSAFADRQFVTDLLAAGARGYITKGEAGDELLRAIRTVCEG 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + Y+ ++A +A + + + L+ RE Q++ +I +G +I ++L+++ TV Sbjct: 123 RSYLCPEVAATVADALRDSPGVYAAAPRLTARERQVLQLIAEGLTSVQIGDRLHIAASTV 182 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 +R + KL++H ELT AI G+ Sbjct: 183 EVHRRNLMRKLDLHNVAELTRYAIHSGI 210 >UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 Tax=Dehalococcoides RepID=D2BGT0_DEHSV Length = 232 Score = 267 bits (683), Expect = 2e-70, Method: Composition-based stats. Identities = 70/216 (32%), Positives = 120/216 (55%), Gaps = 3/216 (1%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 VL+ DDH ++R G+ R+L K I+VVGEA G++AV DVVLMD+ MP + G Sbjct: 5 KVLIADDHAVLREGMSRLLSQEKDIEVVGEAGDGQEAVDMVAQFKPDVVLMDIVMPRLTG 64 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 +EAT+ I ++ I++LT +++ +++AGA+GYL K A E+V AIR++ +G+ Sbjct: 65 VEATKLIKKNNPSTCILILTAYSDIRYILGLLEAGASGYLLKSAKSDEIVGAIRAIKAGE 124 Query: 123 RYIASDIAQQMALSQI---EPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 + S +++ + + + LS RE++I+ + +KG EI+++L LS + Sbjct: 125 SVLDSIATRKLLERVVNVSKESDEDKVRGQLSPREVEILQLASKGLSNREIADKLTLSMR 184 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETL 215 TV ++ +F+K+ E R G E + Sbjct: 185 TVKAHLSNIFNKMRCSCRTEAIVKGFREGYVMLEDV 220 >UniRef50_D1CF52 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=D1CF52_THET1 Length = 1648 Score = 267 bits (683), Expect = 2e-70, Method: Composition-based stats. Identities = 70/209 (33%), Positives = 120/209 (57%), Gaps = 3/209 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + V++ DDH L R GI+ +LE G ++VGEAS G++AV+ + D+VLMD+SMP +G Sbjct: 1439 LRVVIADDHALFRDGIKSLLESE-GFQMVGEASNGQEAVELVHNLSPDLVLMDLSMPVMG 1497 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GL+A R I+ VK+I+LT E+ + ++AGA G++ K +E +R+V G Sbjct: 1498 GLDAIRLISADKPSVKVIVLTASEEDKDLFEAIKAGAQGFIPKNLESEEFFQLLRNVIRG 1557 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQ-KVNEISEQLNLSPKT 180 + I +A ++ P ++ S L++RE +I+ ++ G ++S QL +S T Sbjct: 1558 EPAITPRLAGKLIDEFSRPVRSSS-LQMLTDREQEILQLLVNGVTSTKDLSRQLGVSEHT 1616 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 V + + SKL++ ++ A++HGL Sbjct: 1617 VKYHLRNILSKLHLQSRAQVVAWAVQHGL 1645 >UniRef50_Q47FR0 Two component transcriptional regulator, LuxR family n=9 Tax=Betaproteobacteria RepID=Q47FR0_DECAR Length = 218 Score = 267 bits (683), Expect = 2e-70, Method: Composition-based stats. Identities = 77/216 (35%), Positives = 126/216 (58%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI L+ DDH+++R G++ IL D I V EAS G +A+ R D +++D++MPG Sbjct: 1 MIRTLIADDHDILRIGLKHILSDTGDIVVTAEASNGIEALVELRKGTFDALVLDLTMPGR 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+E ++I + I++L++H E+ + ++AGA+GYL K +A + AIR V Sbjct: 61 NGIELIKQIKGEFPKLPILILSMHKEDIYAVRSLKAGASGYLCKDSAETLLADAIRKVAD 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G +I +A+++ L + T++P L++RE QI LMI +G V EI QLNLS KT Sbjct: 121 GGLFINQAVAEKLTLQILHGRDTDAPHTGLTDREHQIFLMILQGLGVTEIGRQLNLSVKT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLS 216 V++++ + +K+N+ EL AI+H L + Sbjct: 181 VSTHKASILAKMNLRNSAELVRYAIQHRLIDENDAL 216 >UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococci RepID=Q9RU37_DEIRA Length = 225 Score = 267 bits (683), Expect = 3e-70, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 118/212 (55%), Gaps = 4/212 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + VLLVDDH +VR G+R L +GI+VVGEA+ GE+A++ +VV+MD+ MP + Sbjct: 14 VRVLLVDDHAVVRQGLRLFLGLDEGIEVVGEAANGEEALQEAERLRPEVVVMDLMMPVMD 73 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ ATR++ R D ++I LT E ++AGA Y+ K A+ + AI + G Sbjct: 74 GITATRELRRRLPDTEVIALTSTLEENKVNGAIEAGAISYMLKDASSDTLADAIHAAARG 133 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + + + A+++ PE ES L+ +E ++ ++ +GQ +I+ + +S TV Sbjct: 134 EVRLHPEAARRLVRDFRSPEMRES----LTPKETAVLQLLARGQSNKDIAAEQGVSEATV 189 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 ++ R+ SKL + + A+++G+ + E Sbjct: 190 KTHVSRLLSKLGLDSRTQAALYALKYGIASLE 221 >UniRef50_UPI0001789C57 two component transcriptional regulator, LuxR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C57 Length = 225 Score = 267 bits (683), Expect = 3e-70, Method: Composition-based stats. Identities = 67/220 (30%), Positives = 114/220 (51%), Gaps = 9/220 (4%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI ++L DD +R G+R IL+ K ++V+GEA GE+AV N D+VLMD+ MPG Sbjct: 6 MIRIVLADDQPFIRKGLRYILDIQKDMQVIGEAMTGEEAVDITLRNVPDIVLMDIRMPGG 65 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+ AT+ IA + + K+++LT ++AGA+GYL K E++S IR+++ Sbjct: 66 TGIMATKSIAEALPNTKVVLLTTFDVEQYVFDGIRAGASGYLLKDTETDELLSGIRAMHR 125 Query: 121 GQRYIASDIAQQMALSQI---------EPEKTESPFASLSERELQIMLMITKGQKVNEIS 171 G S A++ + + + +L+ERE +++ ++ G++ +EIS Sbjct: 126 GATLFNSSTAKRALDQILTSGMQEPDSDSPGKDRLLGALTERETEVLQLLAYGKRNHEIS 185 Query: 172 EQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 L +S T ++ + + KL + AIR L Sbjct: 186 AILCISEGTTKTHIHHIMQKLGALDRTQAVVTAIRMKLVK 225 >UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Actinomycetales RepID=D2AUN6_STRRD Length = 226 Score = 267 bits (683), Expect = 3e-70, Method: Composition-based stats. Identities = 64/217 (29%), Positives = 111/217 (51%), Gaps = 5/217 (2%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VLL DD ++RAG+R IL I+VV EA G +A+ ++ DVVL+D+ MP + Sbjct: 1 MIRVLLADDEAMIRAGVRAILAADPEIEVVAEAGDGREAIDLVLSHRPDVVLLDIRMPRM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GL A ++ R ++MLT E+ A+ + GA G+L K P+E+++ I +V Sbjct: 61 DGLAAVAELRRVAPGTAVVMLTTFGEDDYIARALGEGAGGFLLKSGDPRELLAGIHAVAE 120 Query: 121 GQRYIASDIAQQMALSQIEPE-----KTESPFASLSERELQIMLMITKGQKVNEISEQLN 175 G Y++ +A ++ A+L+ RE ++ ++ +G +I+ +L Sbjct: 121 GAAYLSPRVAHRVITQLTGGRMTRVVAAREQVAALTPRERDVLALVGEGLSNGQIARRLY 180 Query: 176 LSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 L TV ++ + ++L V+ LA GL ++ Sbjct: 181 LVEGTVKAHVSAILTRLGARNRVQAAILAHEAGLLDS 217 >UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUT0_9FIRM Length = 216 Score = 266 bits (682), Expect = 3e-70, Method: Composition-based stats. Identities = 72/209 (34%), Positives = 124/209 (59%), Gaps = 3/209 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +LL DDH ++R G+ +L + VV EAS GE+A++ VD+ L+D+SMP +G Sbjct: 8 LRILLADDHRVLRKGLSLLLSSEEDFSVVAEASDGEEALEKAAKTPVDIALLDLSMPHMG 67 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLE R++ V++++LT+H+E + ++AGA GYL K E+ A+R+V +G Sbjct: 68 GLECLRRLKAMQPAVRVLILTMHSERQYVCECLRAGANGYLCKDTLDAELFRALRTVAAG 127 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 RY+ A+ + +E + A+LS RE +++ +I G ++ I+++L LS KTV Sbjct: 128 GRYLGEREAELLIDGALEEPEEP---AALSTREREVLELIVHGYSLSTIADKLYLSIKTV 184 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 ++Y+ R+ KL+ + EL A+RH + Sbjct: 185 STYKTRLLQKLDCTQNSELVDYALRHNIL 213 >UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QSJ5_9RHOB Length = 212 Score = 266 bits (682), Expect = 4e-70, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 120/210 (57%), Gaps = 2/210 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLL DDH LVR GIR L + I+VVGEA+ G +AVK DV+LMD+SMP + Sbjct: 5 IRVLLADDHALVRDGIRARLNKVPEIEVVGEATNGREAVKLAHELRPDVLLMDVSMPVMN 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLEA ++ +S ++ +++L+++ + V+QAGA GY+ K + E+++AI SV SG Sbjct: 65 GLEAAAEVRKSFPEIAVLILSIYDNSEYVRGVVQAGARGYILKDISAPEMITAISSVASG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Y +S + + E P+ L++RE Q++ I KG E+++ L +S +TV Sbjct: 125 GYYFSSAVGPTLV-GTATSAPIEDPY-GLTDRERQVLTAIAKGLPNKEVAKSLGISVRTV 182 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 S+R + K+ +L +A GL + Sbjct: 183 ESHRLNLREKVGNKNAAQLYKVAQDLGLLD 212 >UniRef50_UPI00018507A5 two component LuxR family transcriptional regulator n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI00018507A5 Length = 212 Score = 266 bits (681), Expect = 4e-70, Method: Composition-based stats. Identities = 70/203 (34%), Positives = 117/203 (57%), Gaps = 5/203 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+ DDH L R G+ +L + +V+ EA GE+AV+ D+VLMD+ MP + Sbjct: 4 IRVLIADDHPLFRQGVSSVLANTPDNEVIAEAGSGEEAVQMACNLLPDLVLMDIQMPDLN 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATRKI D+ II++T+ ++ MQAGA GY+ K A ++++ A+R++ G Sbjct: 64 GIEATRKILSKCRDIYIIIITMFEDDTSVFSAMQAGARGYVLKDAEKEDILRAVRAIAKG 123 Query: 122 QRYIASDIAQQMALSQIEPEKTE-----SPFASLSERELQIMLMITKGQKVNEISEQLNL 176 + +S +A +M + E T+ + F L+ RE +++ +++KG +E++E L L Sbjct: 124 EVLFSSGVASRMIDYFAQGEVTQTVVASTLFPELTSRESEVLFLLSKGASNSEVAETLGL 183 Query: 177 SPKTVNSYRYRMFSKLNIHGDVE 199 S KTV +Y + +KL + E Sbjct: 184 SNKTVYNYVANILNKLQVSDRQE 206 >UniRef50_D1B9T1 Two component transcriptional regulator, LuxR family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9T1_THEAS Length = 227 Score = 266 bits (681), Expect = 4e-70, Method: Composition-based stats. Identities = 58/211 (27%), Positives = 107/211 (50%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I ++L DDH L R G+RR+LE K ++V+GEA G+ V+ DV+L D+ MP Sbjct: 4 IRIVLADDHRLFRDGLRRLLEMEKDMEVIGEAEDGDATVEMVSALKPDVLLFDIHMPKKD 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++ + + + + +T ++ + G Y+ K + E++SAIRSVY G Sbjct: 64 GIQVVKDLKAMGCSPRFVAITAFDDDDHITALSSVGIDAYVLKASGMAELLSAIRSVYRG 123 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Y+ +A ++ + + + L+ RE++++ I++G EI+ ++ LS KTV Sbjct: 124 HSYVDPKVAGKLLSTFNRRREERDLLSRLTPREMEVLYWISQGLNNGEIARKMVLSEKTV 183 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 ++ + KL++ + A + GL Sbjct: 184 KNHVSHILKKLDLVDRTQAAVFAWKRGLAQL 214 >UniRef50_Q1QVM5 Two component transcriptional regulator, LuxR family n=29 Tax=Gammaproteobacteria RepID=Q1QVM5_CHRSD Length = 214 Score = 265 bits (680), Expect = 5e-70, Method: Composition-based stats. Identities = 113/216 (52%), Positives = 155/216 (71%), Gaps = 2/216 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VL+ DDH LVR I R+L+ G+KV+ EA GE+AV R D+VLMD+ MPGI Sbjct: 1 MIKVLVADDHHLVRTSIARMLDSEDGLKVIAEAVDGEEAVNMARELRPDIVLMDIRMPGI 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GGLEATRKI R +D+K++++T E ++M AGAAG++SKG E+V AIR+++ Sbjct: 61 GGLEATRKIMRGMSDIKVVIVTAFLEEAFAQRLMDAGAAGFISKGTELDEMVRAIRAIFD 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 GQRYI+ DIAQ++ LS++ + ++PF LS RELQ+ +MI QKV++IS++L LSPKT Sbjct: 121 GQRYISPDIAQKVVLSKMGTQ--DNPFDQLSHRELQVAMMIVNCQKVSDISDRLFLSPKT 178 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLS 216 VN+YRYR+F KLN+ DVELTHL +R+GL + S Sbjct: 179 VNTYRYRIFEKLNVQSDVELTHLGLRYGLIDGYEAS 214 >UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobacteria RepID=Q5ZS73_LEGPH Length = 225 Score = 265 bits (679), Expect = 8e-70, Method: Composition-based stats. Identities = 107/218 (49%), Positives = 158/218 (72%), Gaps = 1/218 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 +I VL+VDDH LVR GIRR+LED+ + VV +A GE A+ + +T++ DVVL+DM MPGI Sbjct: 7 LIKVLIVDDHALVRMGIRRLLEDMSDVDVVADAESGEQALAYVKTHSPDVVLLDMKMPGI 66 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G E TR++ ++ ++K+I +T +PLP +V+Q GA GYL+K + +E+ +AIR V Sbjct: 67 DGWEVTRRLKKTNPNIKVIAVTAICSDPLPTRVLQLGAMGYLTKESGAEEMAAAIRKVAK 126 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G++Y++++IAQ+MA++ ++ E +SPF LSERE+Q+MLMIT G V +I+++L LS KT Sbjct: 127 GEKYLSAEIAQKMAINSLQ-ESQDSPFDLLSEREMQVMLMITSGMNVQDIADRLFLSSKT 185 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLSSQ 218 +N YRYRMF KL I DVELT+LA++H + SQ Sbjct: 186 INGYRYRMFEKLGIKNDVELTYLAMKHRIIEHPNDLSQ 223 >UniRef50_C6CZA5 Two component transcriptional regulator, LuxR family n=4 Tax=Firmicutes RepID=C6CZA5_PAESJ Length = 221 Score = 265 bits (679), Expect = 8e-70, Method: Composition-based stats. Identities = 67/214 (31%), Positives = 115/214 (53%), Gaps = 5/214 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAV----DVVLMDMSM 57 + V++VDDH++VR G+R L +VV EA G+ A+ DV+LMD+ M Sbjct: 7 LKVMIVDDHDMVRTGLRTYLMLEPKFEVVAEAGSGQAAISMLEAGLPSGLPDVILMDLMM 66 Query: 58 PGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRS 117 PG+ G+E TR++ ++KIIMLT E+ ++AGA Y+ K + +E++ A+ Sbjct: 67 PGMDGIETTRQLIVEYPNLKIIMLTSFLEDDKVYGAIEAGAVSYVLKTVSAEELIYALHG 126 Query: 118 VYSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 G + +D++Q + + +S L+ERE +++L+I +G+ EI E+L++S Sbjct: 127 AVKGMPVMTADVSQALTRGLRQ-RTAQSGDEELTEREKEVLLLIAEGRSNKEIGEELHIS 185 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 KTV ++ + K + +L LA R G Sbjct: 186 VKTVKTHVSNLLMKCELEDRTQLAVLAHRKGWVK 219 >UniRef50_Q024Y7 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q024Y7_SOLUE Length = 225 Score = 265 bits (679), Expect = 8e-70, Method: Composition-based stats. Identities = 76/211 (36%), Positives = 129/211 (61%), Gaps = 3/211 (1%) Query: 4 VLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGL 63 ++LVDDH+LVR G+R ILE VVGEA G DAV+ C+ ++ D+VLMD+ +PG+ G+ Sbjct: 5 IVLVDDHKLVRDGVRMILERGSEFLVVGEAENGADAVQLCKKSSPDIVLMDIGLPGMNGI 64 Query: 64 EATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQR 123 EAT ++ R VK+I+L+++ + +++GA ++ K A+ E++ A+R+V G Sbjct: 65 EATTELLRHCPSVKVIILSMYDDENSVVSAIRSGARAFVLKKASSNELLDALRTVARGGS 124 Query: 124 YIASDIAQQMALSQIEPE---KTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 Y++S ++ ++ + SP SLS RELQ++ ++ +G+ +I+ L+L +T Sbjct: 125 YLSSQVSDRLLQRIQRGDLETHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLLDLGLQT 184 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V SYR M KL ++ LT LA+ G+ + Sbjct: 185 VRSYRKTMMKKLGVNNVAGLTQLALAAGITH 215 >UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR family n=10 Tax=Proteobacteria RepID=Q1GZT3_METFK Length = 215 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 81/210 (38%), Positives = 135/210 (64%), Gaps = 1/210 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V++ DDH ++R G+++IL + + I+VV +A +A+K T +DVV++D+S+P Sbjct: 7 IKVVIADDHAILREGLKQILAETEDIEVVADAKNAAEAIKLAGTKGLDVVVLDISLPDRS 66 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA I + V ++ML++H E+ + ++AGA GYLSK +A ++V+AIR+V G Sbjct: 67 GIEACNIIKKEHPGVAVLMLSMHREDAYAIRALRAGAVGYLSKQSASDQLVTAIRTVAKG 126 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 ++YI++++A +A + + +LS RE Q + MI G V+EI+E L+LS KTV Sbjct: 127 KKYISAEVALALADQ-VSGGLEKPIHDTLSNREFQTLTMIASGLSVSEIAENLSLSVKTV 185 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 + YR R+ KLN+ + ELTH AI++ L + Sbjct: 186 SMYRARLLEKLNLRHNAELTHYAIKNNLID 215 >UniRef50_C7MRK0 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MRK0_SACVD Length = 226 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 74/217 (34%), Positives = 124/217 (57%), Gaps = 9/217 (4%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNA------VDVVLMDM 55 + V++VDDH +VR G+R LE + +++V EA+ G++AV VVLMD+ Sbjct: 11 VRVMVVDDHAIVRRGLRAYLETVPDLRLVSEAADGQEAVDLLNERHVVGDPMPHVVLMDL 70 Query: 56 SMPGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAI 115 MP + G+EATR I S DVK+++LT +E + AGAAGY+ K A P+EV +A+ Sbjct: 71 QMPRLDGIEATRSILASYPDVKVVVLTSFSEAERVHAALSAGAAGYVLKDAEPEEVATAV 130 Query: 116 RSVYSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLN 175 R+ G+ ++ + +A+ +A P+ SL+ RE I++++ +G EI+++L Sbjct: 131 RAAVKGEVHLDAAVARLLARRMASPQVG---VTSLTARERDILVLVGQGLSNREIADRLV 187 Query: 176 LSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 +S +T ++ + SKL + + LAIR GL + Sbjct: 188 ISERTARTHVSNVLSKLQLSSRTQAALLAIREGLVSP 224 >UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0L7_PELTS Length = 223 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 63/214 (29%), Positives = 121/214 (56%), Gaps = 4/214 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +LLVDD LVR +R + E I VVGEAS GE+A+K ++LMD++MP + Sbjct: 9 IQLLLVDDDPLVRRSLRMLFELH-DINVVGEASNGEEALKAIARLKPTMILMDVNMPKMD 67 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++A + I + D+++I+LTVH ++ + ++ G + Y+ K + P++++ + SV G Sbjct: 68 GIQALKAIKTNYPDIQVIILTVHNQHEKVVQAIRDGCSAYVLKDSPPEQLIEVVESVAEG 127 Query: 122 QRYIASDIAQQMALSQIEPEKT---ESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 + ++ + IA ++ ++ ++ L+ RE +++ +I G EI+ +LN++ Sbjct: 128 RYFVDTSIANELLVNLVQGTPRRQHPKNLPLLTLREKEVLQLIVNGLSNKEIAGKLNITL 187 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 +TV ++ + KLN++ + LAI+ L Sbjct: 188 RTVKAHVSSILMKLNVNDRTQAAVLAIQENLVQP 221 >UniRef50_C1TL62 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL62_9BACT Length = 217 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 59/213 (27%), Positives = 114/213 (53%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I ++L+DDH+L R G++++LE + GEAS G + + + + DVVL+D+ MP + Sbjct: 4 IRMVLIDDHKLFRDGMKKLLEMEPDFSLEGEASDGIEGLALIKRSRPDVVLLDIGMPNLD 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ R++ + + K + +T + +++ G G++ K + E++SAIRSV G Sbjct: 64 GIGLIRELRSTEQNTKFVAITAFNDERKLSELSSVGVHGFVLKSSGRTELLSAIRSVARG 123 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Q Y+ +A + + + + L++RE +++ + +G EIS ++NLS KTV Sbjct: 124 QCYVDPKVAGLLLGAFHKKQDEADMLCDLTDREKEVLFWLAQGLSNLEISAKMNLSEKTV 183 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 ++ + KL++ + LA R G+ + Sbjct: 184 KNHVSHILKKLDLRDRTQAAILAWRVGIAESSE 216 >UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NY27_AZOSE Length = 215 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 122/210 (58%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I ++L DDH++ R +R +LE GI++VGEAS G++ + VD+ +D+ MPG+ Sbjct: 3 IRIVLADDHQMFRHALRAMLEKEPGIRIVGEASNGDELIDLISHQPVDIACVDIGMPGMN 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR++ V++I L+ ++ ++ AGA GY++K A +E++ AI +V Sbjct: 63 GIEATRRLLAIRPHVRVIGLSAFSDRQFVLDLLNAGATGYVTKAEAGEELLRAIHTVQQS 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + Y+ D+A + + ++ + ++ RE Q++ +I +G I+++L+L+P TV Sbjct: 123 KTYLCPDVAATVTNALLDNAPKDISAPRITARERQVLQLIAEGYTSTRIADRLHLAPSTV 182 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 +R + KL++H ELT AIR G+ Sbjct: 183 EVHRRNIMRKLDLHSVAELTKYAIRSGITT 212 >UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q1ASU8_RUBXD Length = 207 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 60/211 (28%), Positives = 108/211 (51%), Gaps = 7/211 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +L+ DDH ++R G+ +L G +VVGEA GE+ ++ DVVL+D+ MPG G Sbjct: 4 IRILVADDHPMLREGLSAVLGTRPGFEVVGEAGDGEEVLRLASGLRPDVVLLDLEMPGTG 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+E R++ K+++ T + + + ++ GA G L KGA+ E+ A+R+V++G Sbjct: 64 GVEVLRRLRGLDDPPKVVVFTAYDDER-LLEALREGARGCLLKGASRTEIFDAVRTVHAG 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 I +I ++ L+ REL+++ ++ +G E++ L +S +TV Sbjct: 123 GSVIPPEITARVLKEMRGES------EPLTPRELEVLRLVARGLTNREVARALFISERTV 176 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 + + +KL + +A GL A Sbjct: 177 KFHVSSLLAKLRAENRTQAVAIARERGLLRA 207 >UniRef50_UPI0001789139 two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=UPI0001789139 Length = 216 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 63/213 (29%), Positives = 110/213 (51%), Gaps = 8/213 (3%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRT-NAVDVVLMDMSMPG 59 MI+VL+ DD +R ++ ++ I+V A GE+A+ DVVLMD+ MP Sbjct: 1 MISVLIADDDPFIRESLKLLVGMDPDIEVSAVAEHGEEALSLLMDGLHADVVLMDIRMPV 60 Query: 60 IGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVY 119 G+E TR+I DV+++MLT ++ + ++ GA+GYL K P ++ I++V+ Sbjct: 61 CDGVEGTRRIRERYPDVRVLMLTTFDDDDYIVEALRNGASGYLLKNIPPDRIIQGIKTVH 120 Query: 120 SGQRYIASDIAQQMALSQIEPEKTESPFAS------LSERELQIMLMITKGQKVNEISEQ 173 G I DIA+++ + P P ++ L+ E +++ +I +G EI+ Q Sbjct: 121 DGNMLIHPDIARKL-TGMLRPTPQPVPRSAELEQFGLTPAEKRVVALIAEGLSNKEIAAQ 179 Query: 174 LNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIR 206 L LS TV +Y + KLN+ ++ ++ Sbjct: 180 LYLSEGTVKNYVTEILGKLNLRDRTQIAIFYLK 212 >UniRef50_D2Q2Q8 Two component transcriptional regulator, LuxR family n=3 Tax=Actinomycetales RepID=D2Q2Q8_9ACTO Length = 216 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 80/216 (37%), Positives = 120/216 (55%), Gaps = 5/216 (2%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VL+VDD +LVRAG+R ++++ ++VVGEAS G +A+ R + DVVLMD+ MP + Sbjct: 1 MIRVLVVDDQDLVRAGLRLLIDNTDDLRVVGEASDGREALALAREHQPDVVLMDLQMPVM 60 Query: 61 GGLEATRKIARSTA--DVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSV 118 GG+E T I D +++LT + +QAGA+GYL K A E+ AIR+ Sbjct: 61 GGVETTAAIRADPLLKDTPVVVLTTFDHDADVVDAVQAGASGYLLKDLAADELRGAIRTA 120 Query: 119 YSGQRYIASDIAQQMALSQIE---PEKTESPFASLSERELQIMLMITKGQKVNEISEQLN 175 +G IA +A+ M + E A L+ REL I+ + +G EI + L Sbjct: 121 VTGGAPIAPKVAKLMMHRISRMPSRKVQEETLAGLTARELDILAHVGRGLSNEEIGQALF 180 Query: 176 LSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 LSP+T +Y R+ +KL + +L LA + GL + Sbjct: 181 LSPETARTYVSRLLAKLGVRDRSQLVVLAHKAGLVD 216 >UniRef50_B2A6W2 Two component transcriptional regulator, LuxR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W2_NATTJ Length = 215 Score = 263 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 67/214 (31%), Positives = 119/214 (55%), Gaps = 3/214 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I+VL+VDDH ++ G+ +L ++V G+ ++A+ C+ DVVL+D+S+P Sbjct: 3 ISVLVVDDHAVLGKGLSMLLNSQDDMEVCGQVGTAKEALDTCKEKCPDVVLLDLSLPDKQ 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G E +++ S +++ LT+H + +V++AG GY+ K AA E++SAIRSVY G Sbjct: 63 GHEIIKELKESC-SARVLALTMHEDEAYFKRVVEAGGDGYILKKAADDELISAIRSVYQG 121 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFA--SLSERELQIMLMITKGQKVNEISEQLNLSPK 179 + + + + P+K LS+RE +++ +I G EI+E+L +S K Sbjct: 122 EVIVDKTFTKLLIDYYRNPDKQSGTEKNYDLSDREKEVLQLIALGYTNKEIAEKLYISIK 181 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 TV ++ R+ KL ++ EL A+R+ + + E Sbjct: 182 TVETHIARIKEKLGLNRRSELVRYAMRNNIISTE 215 >UniRef50_P94439 Uncharacterized transcriptional regulatory protein yfiK n=4 Tax=Bacillales RepID=YFIK_BACSU Length = 220 Score = 263 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 60/216 (27%), Positives = 116/216 (53%), Gaps = 8/216 (3%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +++ DD ++VR G+ +L+ + + V+ A G++A + + D+VLMD+ MP Sbjct: 1 MIKIIITDDQDIVREGLASLLQLREELDVIATARNGQEAFEKAKELEPDIVLMDIRMPVS 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+E T+ I S VK++MLT ++ L A+ ++ GA+GYL K + +V A+ +V+S Sbjct: 61 NGVEGTKLITSSLPSVKVLMLTTFKDSALIAEALEEGASGYLLKDMSADTIVKAVMTVHS 120 Query: 121 GQRYIASDIAQQMALSQIEPE--------KTESPFASLSERELQIMLMITKGQKVNEISE 172 G + ++ QM + + + L+ERE++++ + G EI+E Sbjct: 121 GGMVLPPELTAQMLNEWKREKQLKGINEIEKPNELLDLTEREIEVLAELGYGLNNKEIAE 180 Query: 173 QLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHG 208 +L ++ TV ++ + SKL + + ++R+G Sbjct: 181 KLYITEGTVKNHVSNIISKLAVRDRTQAAIYSVRYG 216 >UniRef50_A9AZR3 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AZR3_HERA2 Length = 213 Score = 263 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 69/208 (33%), Positives = 114/208 (54%), Gaps = 3/208 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 +I ++LVDDH +VR G+R +L + +VGEA G DA++ V+LMD+ MP + Sbjct: 4 IIRIMLVDDHAIVREGLRTLLAEDTEFLIVGEAQNGADAIELAAVVRPHVILMDLVMPNV 63 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G++AT+ + +II+LT +++ +K +QAGA+GYL K E+ AIR+V + Sbjct: 64 DGIQATQALQSLMPSSRIIVLTSFSDDQWVSKAIQAGASGYLLKNVLKAELFLAIRTVAN 123 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 GQ ++ ++ + + P S SL+ERE ++ I G EI+ L+L+ T Sbjct: 124 GQPFLHAEAQRTLMRQSTAP---PSLLPSLTERERSVLDGIVGGLSNKEIARSLHLTEGT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHG 208 V Y + +KL + + AI+HG Sbjct: 181 VKGYVSTILTKLAVADRTQAALYAIKHG 208 >UniRef50_A1K960 Probable transcriptional regulator, LuxR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K960_AZOSB Length = 209 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 72/209 (34%), Positives = 136/209 (65%), Gaps = 1/209 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 M+ VL+ DDH +VR G+R+ L + +V EA+ G+ A++ RT+ DVVL+D+++P + Sbjct: 1 MVKVLIADDHAVVRGGLRQFLSSTEEFDIVAEAANGQTALELVRTSGCDVVLLDITLPDL 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GLE ++I RS D+ +++ ++ +E+ + AGA+GYL+K + P ++++A+ +V + Sbjct: 61 NGLEVLKRIKRSKPDLPVLIFSMFSEDEFALPALNAGASGYLNKDSPPAQILAALHTVVA 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G RY++ +A+++ + P K P +LS RE+ ++L+++KG + I EQ +LS KT Sbjct: 121 GARYVSPSLAERLLAGTMSPGK-RLPHENLSPREMAVLLLLSKGVPLTRIGEQFHLSVKT 179 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 +++YR R+ KL++ + E+T ++H L Sbjct: 180 ISTYRARILEKLDLASNAEITRYVLQHKL 208 >UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexaceae RepID=A9WKI8_CHLAA Length = 209 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 68/211 (32%), Positives = 118/211 (55%), Gaps = 6/211 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPG-I 60 I V LVDDH +VR G+ L I VVGEA+ GE A++ T DV++MD+ MPG I Sbjct: 4 IRVALVDDHSIVRRGLSAYLAAQPDIVVVGEAANGESALQMASTWQADVIVMDVLMPGGI 63 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+E TR++ R II+L+ + ++ ++AGA Y+ K + P++++ AIR + Sbjct: 64 DGIETTRQLKRLIPHTHIIILSGYADDARVIGALRAGAITYIEKESQPEQLLEAIRGAMA 123 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+ +A + Q++ +Q +L+ERE +++ ++ +G EI+ +L +S +T Sbjct: 124 GKAVLAPALMQRILEAQTSKAA-----DTLTEREREVLKLVAEGLTNAEIASRLTVSEET 178 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V ++ + KL + + A+RHGL + Sbjct: 179 VKTHVASILRKLGLAHRTQAAIYALRHGLVS 209 >UniRef50_C7NKN7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=138 Tax=Bacteria RepID=C7NKN7_KYTSD Length = 244 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 70/221 (31%), Positives = 114/221 (51%), Gaps = 17/221 (7%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 + LVDD LVRAG R +L+ + VVGEA G+ AV +T A DVVLMD+ MP + G Sbjct: 4 RIFLVDDQSLVRAGFRMVLDAQPDMSVVGEAPDGQSAVDQLKTIAADVVLMDIRMPRLDG 63 Query: 63 LEATRKI--ARSTA---DVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRS 117 +EATR + + K+++LT + ++AGA+G+L K A P+E+++AIR+ Sbjct: 64 IEATRVLLGRDKHPGGAEPKVVVLTTFDMDEYAYAALEAGASGFLLKDAGPEELLAAIRA 123 Query: 118 VYSGQRYIASDIAQQMALSQI------------EPEKTESPFASLSERELQIMLMITKGQ 165 V SG +A +++ + E+ E L+ERE ++ + G Sbjct: 124 VASGDAVVAPSTTKRLLERFVPTLTPEVADVASPAEQQEYLREVLTEREYEVFEAVAAGL 183 Query: 166 KVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIR 206 EI+++L ++ T+ ++ R+ KL V+L A Sbjct: 184 SNTEIAKELFVAEATIKTHIGRLLFKLGCRDRVQLVITAYE 224 >UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 Tax=Methylococcus capsulatus RepID=Q60AR8_METCA Length = 215 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 76/208 (36%), Positives = 127/208 (61%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V+LVDDH +VRAG R +L I+VVGEA GE+A + DV++MD+S+PGIG Sbjct: 5 ITVMLVDDHAVVRAGYRLLLSGTPNIEVVGEAERGEEACQLYADTRPDVIVMDLSLPGIG 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GL + R+I +I++ ++H E + ++AGA GY++K AP+ +V A+ + SG Sbjct: 65 GLASIRRIRSRDTSARILVFSIHDELIYVVRALEAGARGYITKSCAPEILVEAVARIASG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + ++ +IAQ++A+ + + + +LS RE + L++ KG E++E+L L KTV Sbjct: 125 ESFLEPEIAQRLAMQTLGGAEATTALNTLSAREFDVFLLLAKGYTTREVAEELRLGYKTV 184 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 +Y + SKL ++ E+ LA ++G+ Sbjct: 185 ANYSTLIKSKLGVNTTAEMARLAYQNGI 212 >UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C4B6_LISGR Length = 214 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 67/214 (31%), Positives = 121/214 (56%), Gaps = 3/214 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMP-GI 60 + +L+ DDH +VR+ ++ ++ K ++V+G+A+ G +A + +N D+VLMD+SMP G Sbjct: 1 MKLLIADDHAVVRSALKFMINAQKDMEVIGDAADGTEAFLFIESNRPDIVLMDLSMPPGE 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GL T++I + + K+I+LT+H E + +QAGA GY+ K ++ + ++ AIRSV Sbjct: 61 NGLLTTKRITEAFPETKVILLTMHDEEAYITQALQAGAQGYIMKNSSEELLLDAIRSVMG 120 Query: 121 GQRYIASDI--AQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 GQ I + + + +E+ LS+RE +I+ +I G EI+E+L +S Sbjct: 121 GQIIIDPVFNYSSKQIEQLKRADASENIIERLSKREKEILPLIALGYGNKEIAERLFISA 180 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 KTV ++ + KL + +L ++ L + Sbjct: 181 KTVEVHKSHIMKKLEMKKFSDLLRFCVKEQLIDL 214 >UniRef50_C0N6H7 Response regulator receiver domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6H7_9GAMM Length = 214 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 81/209 (38%), Positives = 134/209 (64%), Gaps = 2/209 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V+LVDDH +VR+G+ R+LE I VVGEA GE A + + DV++MDMSMPG+G Sbjct: 5 IRVMLVDDHAVVRSGLCRLLEQNTDISVVGEAESGEQAYQTYPEISPDVLVMDMSMPGMG 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLEA R+I + K+IM ++H + + AGA GY++K +++V A+R V SG Sbjct: 65 GLEAVRRILNRWSGAKVIMFSMHENATYAIQSLTAGAMGYVAKSGHAEDLVKAVREVKSG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + +++SD+A ++AL + ++P L+ RE ++ ++ +G+ V++I+ +LN+ KTV Sbjct: 125 KSFLSSDMAHKVALQSL--AGDDNPTQRLTSREFEVFRLLAEGKLVDDIASRLNIGQKTV 182 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 +Y+ + KL IH V+L LA+++G+ Sbjct: 183 ANYQTSLKQKLGIHSPVDLVRLAMKYGVI 211 >UniRef50_C6E3E1 Two component transcriptional regulator, LuxR family n=4 Tax=Deltaproteobacteria RepID=C6E3E1_GEOSM Length = 223 Score = 263 bits (673), Expect = 4e-69, Method: Composition-based stats. Identities = 62/217 (28%), Positives = 115/217 (52%), Gaps = 5/217 (2%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 VL+VDDH L R G++ ++E + VGEA CG +A+ + D+V MD+S+P + G Sbjct: 5 RVLIVDDHPLFREGVKSLVERSANYQAVGEAGCGAEALALAQELKPDLVTMDVSLPDMSG 64 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 +E R I + +I+ML+++ + A+ +AGA GY+ K ++ ++ G+ Sbjct: 65 IEVVRGILDLAPETRILMLSMYPKFDYVAEAFKAGAKGYVVKETTTARLIQGFDALCRGE 124 Query: 123 RYIASDIAQQMALSQIEPEKTESPFAS-----LSERELQIMLMITKGQKVNEISEQLNLS 177 ++ ++Q + + + L+ RE Q++ ++ +G +I+ + LS Sbjct: 125 FFVDGQVSQDLVAKLAQGAARDQALQDEKYGLLTPREQQVLRLVAEGSSTRQIAAAIELS 184 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 PKTV ++R + KL++H +EL A R GL + E+ Sbjct: 185 PKTVENHRTNLMKKLDVHSKMELVKYAARLGLIDVES 221 >UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0B0G6_SYNWW Length = 213 Score = 263 bits (673), Expect = 4e-69, Method: Composition-based stats. Identities = 67/211 (31%), Positives = 115/211 (54%), Gaps = 2/211 (0%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 V++ DDH LVR G+R++LE IKV+ E G+ A+ R D+++MD++MPG G Sbjct: 5 RVVIADDHVLVREGLRKLLELDSNIKVIDEVGDGQGAINIARKEKPDIIIMDVNMPGTDG 64 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 + ATR I R V+II LTV+ +++AGA+ Y+ K A E+V I V +G+ Sbjct: 65 IVATRVIKRELPSVRIIALTVYEGEE-VVDMVKAGASAYILKDVAGSELVDTIHRVMNGE 123 Query: 123 RYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVN 182 I +A ++ + E +S L++RE ++ ++ KG E++E + +S KTV Sbjct: 124 VVIYPRVANRLVRELRQSENRKSEI-RLTKREKDVLTLLVKGNTNKEMAEVMFISEKTVK 182 Query: 183 SYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 ++ +F KL + A+++ + + E Sbjct: 183 NHLTSIFRKLGVKDRTHAAIYALKNRIVSEE 213 >UniRef50_C7QC31 Two component transcriptional regulator, LuxR family n=95 Tax=Actinobacteria (class) RepID=C7QC31_CATAD Length = 236 Score = 263 bits (673), Expect = 4e-69, Method: Composition-based stats. Identities = 74/217 (34%), Positives = 121/217 (55%), Gaps = 7/217 (3%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 V+L DD +LVRAG+R +++ G+ VVGEA+ G DAV+ R DVVLMD+ MPG+ G Sbjct: 15 RVVLADDQDLVRAGLRLMIDRAPGLAVVGEAATGHDAVRIAREARADVVLMDIRMPGLDG 74 Query: 63 LEATRKIARSTA--DVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 L ATR+IA + V++++LT + + +++GA+G+L KGA P ++ AIR+V Sbjct: 75 LAATRRIAADDSLAGVRVLILTTFEVDDYVFEALRSGASGFLGKGARPDALIDAIRTVAR 134 Query: 121 GQRYIASDIAQQMALSQI-----EPEKTESPFASLSERELQIMLMITKGQKVNEISEQLN 175 G ++ + + + EP +L++RE ++ ++ G +I+ QL Sbjct: 135 GDALLSPSATRGLIARFLSLQDTEPVHPSPLLTTLTDRERELTALVADGMSNTDIARQLT 194 Query: 176 LSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 LSP TV ++ +KL +L LA + GL + Sbjct: 195 LSPLTVKTHVNHAMTKLGARDRAQLVVLAYQTGLAHP 231 >UniRef50_A7HA46 Two component transcriptional regulator, LuxR family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HA46_ANADF Length = 212 Score = 263 bits (673), Expect = 4e-69, Method: Composition-based stats. Identities = 76/212 (35%), Positives = 124/212 (58%), Gaps = 4/212 (1%) Query: 5 LLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGLE 64 ++ DDHE+VR G+R ++E G V GEAS G +AV+ + DVV++D++MP + GLE Sbjct: 1 MVADDHEVVRRGVRALVESHPGWTVCGEASNGREAVRLAQELRPDVVVLDVTMPELNGLE 60 Query: 65 ATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQRY 124 ATR+I S D +II+LTVH + L + + AGA GY+ K A + +V AI ++ Y Sbjct: 61 ATREIRASVPDTEIILLTVHDSDQLLGQALDAGARGYVLKEDAARHLVDAIDALSKHAPY 120 Query: 125 IASDIAQQMALSQIEPEKT----ESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 + S A++ + + T SL++RE +++ ++ +G E++ QL++S KT Sbjct: 121 VPSRAAERPGNAAAQERNTVVSRGGRVTSLTQREREVLRLLAQGDSNREVAGQLSISAKT 180 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 V ++R + KL V+L H AIR+G+ Sbjct: 181 VETHRANVMRKLGASSIVDLVHYAIRNGIVEP 212 >UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeobacter violaceus RepID=Q7NMF3_GLOVI Length = 212 Score = 263 bits (673), Expect = 4e-69, Method: Composition-based stats. Identities = 65/213 (30%), Positives = 112/213 (52%), Gaps = 3/213 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 M +L+V+DH L+R G+R++L +V GEA+ GE A+ R+ D+VLMD+ +P + Sbjct: 1 MTRILIVEDHALMRIGLRQVLSQTPEYEVAGEAADGEQALALARSLQPDLVLMDLGLPVM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAA--PQEVVSAIRSV 118 G E TR + R ++++ LT H E+ + AGA GY K A +++A+ SV Sbjct: 61 SGTEVTRILKREYPAMRVLALTSHDEDESVFGALAAGADGYCLKATAGIASRLLAAVASV 120 Query: 119 YSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 G ++ DIA ++ + + LSERE++++ +I G EI +L ++ Sbjct: 121 RDGAAWLDPDIADRVLRDLGRIPQAGAD-NPLSEREMEVLKLIADGLTNAEIGRRLYIAS 179 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 TV + + +KL ++ V+ A+R G Sbjct: 180 GTVRVHVSNIIAKLGVNDRVQAAVRALREGWIR 212 >UniRef50_A5WFD3 Two component transcriptional regulator, LuxR family n=3 Tax=Psychrobacter RepID=A5WFD3_PSYWF Length = 211 Score = 262 bits (672), Expect = 4e-69, Method: Composition-based stats. Identities = 96/212 (45%), Positives = 146/212 (68%), Gaps = 1/212 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VL+VDDH+LVR GI R+L D I+V+GEA GE A++ + + DVVL+D++MP I Sbjct: 1 MIKVLVVDDHDLVRMGISRMLADDPEIEVIGEADSGEAAIRMVKALSPDVVLLDVNMPNI 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GG+E T+++ + VKI+ ++ + P P+ +++AG GY++KG E++ AI+ VY Sbjct: 61 GGVETTKRLRQFDEKVKILAVSSVSSQPYPSMLLKAGVNGYITKGTPLDEMIKAIKKVYQ 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G +Y +SD+A+Q+A + + ESPF LSERE Q+ +M+ Q +I++QL +S KT Sbjct: 121 GSKYFSSDVAEQLADMLL-TDNEESPFDRLSEREKQVAMMVVNCQSPQQIADQLFVSVKT 179 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 VN+YRYR+F K+ + DV+LTHLA+RHGL Sbjct: 180 VNTYRYRIFEKVGVDSDVKLTHLAMRHGLITP 211 >UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYF0_9SPHI Length = 218 Score = 262 bits (672), Expect = 4e-69, Method: Composition-based stats. Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 5/215 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + V + DDH L R G+ ILE I+VV A G++ + DV+LMD+ MP + Sbjct: 3 VKVAIADDHVLFRKGLVTILELDDNIEVVYGADNGKELIDKVDAQPPDVILMDLKMPVMD 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EAT+ I +VK+++L+++ E ++ GA GYL K P E+V AI +V + Sbjct: 63 GMEATKIIKAKYPEVKVLVLSMYDEEKFIIHCLELGANGYLLKNTDPDELVHAIGTVMAK 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFA-----SLSERELQIMLMITKGQKVNEISEQLNL 176 Y + I+ M + ++ + L++RE +++ +I K E++E+L + Sbjct: 123 DFYFNNHISTVMLKGLNQKKRAKGKPQFENSIELTKREQEVLELICKELTTPEMAEKLFI 182 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 S +TV +R + K L A+++ L Sbjct: 183 SNRTVEGHRKNLLEKTGAKNTAGLVVFALKNELVE 217 >UniRef50_A1SKW0 Two component transcriptional regulator, LuxR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SKW0_NOCSJ Length = 215 Score = 262 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 114/210 (54%), Gaps = 6/210 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+VDDH L R G RRILE + VVG+A+ GEDA+ VVLMD+ +PG+ Sbjct: 6 IAVLVVDDHTLHRDGTRRILEQYDDVDVVGDAASGEDALAMVNRLHPRVVLMDIRLPGMN 65 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR+I D +++++T + + GAAGYLSK A +E+V A+R+V G Sbjct: 66 GIEATRRIRERHPDTRVLIVTAYDDEEYVRGAFDVGAAGYLSKTAPGRELVEAVRAVAGG 125 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + + + K SP +L++RE ++ ++ +G +I+ +L +S +TV Sbjct: 126 NSVLQPTLMAALL------AKRSSPANTLTDRERAVLRLLAEGMHNKQIASRLGISARTV 179 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 + R++ KL + E AI L + Sbjct: 180 ERHCDRIYGKLGVTSRTEAVVRAISANLLD 209 >UniRef50_C1TL94 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL94_9BACT Length = 215 Score = 262 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 74/215 (34%), Positives = 128/215 (59%), Gaps = 2/215 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +++ DDHEL G+R IL + V+ A G++A++ + DVV+MD++MP + Sbjct: 1 MIPLIIADDHELFLEGVRDILSREDDLDVLALARTGQEALELTLQHHPDVVVMDVTMPKM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EA+R+I S DVKI+ L++H + L A++++AGA+GY K + +E++ AI V S Sbjct: 61 NGIEASRRIKSSLGDVKILALSMHADKRLIAEILKAGASGYALKEGSSEELIRAIHIVSS 120 Query: 121 GQRYIASDIAQQMALSQIE--PEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 G+ Y++ IA + ++ S + LS+RE +++ ++ KG E++ L++S Sbjct: 121 GETYLSPKIASILIKDYLKLLDTAVPSRASLLSDREREVLALLAKGSSTKEVASSLHISK 180 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 TV+++R R+ KL+ EL AIR GL + Sbjct: 181 NTVDTHRRRIMEKLDCGNIAELIRFAIREGLIDLG 215 >UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromonadales RepID=Q485W6_COLP3 Length = 215 Score = 262 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 119/210 (56%), Gaps = 4/210 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 ++V +VDDH +V+ G++ L I +VG G DA+ DV+LMD+SMP + Sbjct: 9 VSVQIVDDHPMVQGGLKACLSFYDDIIIVGSTDDGSDALNKAIELKPDVILMDISMPTMN 68 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++AT I + K+++L++H+ +QAGA GYL K +E+ AI++V +G Sbjct: 69 GIDATEIITEQLPETKVLILSMHSNPEFVKSAIQAGAVGYLLKDTTSEEIYYAIKAVANG 128 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + + +S IA+ + + + ++ L+ RE ++ + KG+ EI++ LN+S +TV Sbjct: 129 KTHFSSSIAKLLIDNPVNTNES----EKLTTREQVVLSYLAKGKTSKEIAKILNISFRTV 184 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++R M +KL IH +L A++HG+ Sbjct: 185 EAHRRNMKTKLGIHSLAKLISYAVKHGIIK 214 >UniRef50_C4RJ91 Two-component system response regulator n=2 Tax=Actinomycetales RepID=C4RJ91_9ACTO Length = 232 Score = 262 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 70/223 (31%), Positives = 114/223 (51%), Gaps = 10/223 (4%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI L+VDD LVRAGIR +L+ I+VVGEA+ G +AV+ DVVLMD+ MP + Sbjct: 1 MIRALVVDDQGLVRAGIRVLLDTAPDIEVVGEAADGHNAVRLVERLRPDVVLMDIRMPRV 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EATR++ + +++LT ++ + AGA GYL K P +++ A+R Sbjct: 61 DGIEATRRLLAAAPLTNVLILTTFADDDSVYGALSAGAVGYLVKDGEPADMLDAVRRAAR 120 Query: 121 GQRYIASDIAQQMALSQIE----------PEKTESPFASLSERELQIMLMITKGQKVNEI 170 G+ +A + ++ + + A+L+ RE ++ ++ G EI Sbjct: 121 GEPLLAPSVLARVVDRARRSHAADRNGDIEQPDTAVLAALTARERDVLSLVGVGLSNAEI 180 Query: 171 SEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 + LN+ TV ++ + KL I V+ LA R GL + + Sbjct: 181 ARDLNVGVTTVKTHIVALLEKLGIRNRVQAGILAHRLGLVDEQ 223 >UniRef50_C7Q058 Two component transcriptional regulator, LuxR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q058_CATAD Length = 258 Score = 262 bits (671), Expect = 6e-69, Method: Composition-based stats. Identities = 69/253 (27%), Positives = 117/253 (46%), Gaps = 39/253 (15%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 M+ VL+VDD L+RAG+ IL G +VVGEA G +AV DVVLMD+ MP + Sbjct: 1 MVKVLIVDDQVLIRAGMAAILRAAPGYEVVGEACDGVEAVTMAALTEPDVVLMDIRMPDM 60 Query: 61 GGLEATRKIARSTAD--VKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSV 118 G+ ATR I S + +I++LT + + ++AGA G++ K P+ +++A+++V Sbjct: 61 DGIAATRAILGSGRENLPRILILTTFDMDQYVYEALRAGADGFVLKDTPPERLLAALKAV 120 Query: 119 YSGQRYIASDIAQQMALSQIEP-------------------------------------E 141 G +S + +++ + + Sbjct: 121 ADGDTLFSSTVTRRLVQAYVTATGLDGEPQGPGPGPGPGPVATPAPGLVPRSRRPDGPSS 180 Query: 142 KTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELT 201 + A+L+ RE ++ ++ G EI+E+L +S TV ++ R +KLN+ + Sbjct: 181 AERAALAALTTRETDVLRLVATGLSNGEIAERLVVSEGTVKTHLNRAMAKLNLSSRAQAV 240 Query: 202 HLAIRHGLCNAET 214 LA GL A Sbjct: 241 VLAYESGLVVAGQ 253 >UniRef50_D1BXU0 Two component transcriptional regulator, LuxR family n=3 Tax=Actinomycetales RepID=D1BXU0_XYLCX Length = 223 Score = 262 bits (671), Expect = 6e-69, Method: Composition-based stats. Identities = 59/221 (26%), Positives = 110/221 (49%), Gaps = 7/221 (3%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VL+ DD LVRAG+ ++ ++VVGEA G A+ + D+ +D+ MPG+ Sbjct: 1 MIRVLIADDQPLVRAGLTALVNLEPDLEVVGEAGDGVTALAMAQDLRPDIACLDIRMPGL 60 Query: 61 GGLEATRKIA--RSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSV 118 G+ R++ A + +++LT + ++AG +G+L K A P+ + +AIR V Sbjct: 61 DGIAVARRLCGPDVEAPIPVLVLTTFDLDDYVFGALEAGVSGFLLKDAEPETITTAIRQV 120 Query: 119 YSGQRYIASDIAQQMALSQIEPEKTESPFAS-----LSERELQIMLMITKGQKVNEISEQ 173 +G I + +++ ++ + S L+ RE +I+L++ +G +EI+ Sbjct: 121 AAGNGTIDQTLTRRILREFVQRRSLQPVSTSRGNGVLTSREQEILLLLAQGMSNDEIART 180 Query: 174 LNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 L + TV S+ RM KL + ++ A ++ + Sbjct: 181 LVVELSTVKSHLARMLPKLGVRSRLQAVVWAYQNRFVDLPE 221 >UniRef50_B3PFS2 GacA n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PFS2_CELJU Length = 217 Score = 262 bits (671), Expect = 7e-69, Method: Composition-based stats. Identities = 110/216 (50%), Positives = 147/216 (68%), Gaps = 1/216 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 M +L+VDDH+LVR GI R+L DI G +VVG+A GE+AV R DVVLMD+ MPG+ Sbjct: 1 MTKILVVDDHDLVRMGIVRMLADIDGYQVVGDAKSGEEAVTKARILKPDVVLMDVKMPGM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GGLEAT+K+ +KII +T ++ P ++MQAGA GY++KGA E+ AI V Sbjct: 61 GGLEATKKLLTVNPAIKIIAVTACDDDLYPTRLMQAGAVGYVTKGADFTEITDAINKVTR 120 Query: 121 GQRYIASDIAQQMALS-QIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 G Y+++ IAQQ+AL ESPF LS+RELQ ++I GQKVN+I+ +SPK Sbjct: 121 GDLYMSNSIAQQLALRTFSGANNQESPFEKLSQRELQTAMLIANGQKVNDIANTFCVSPK 180 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETL 215 TVNSYRYR+F KL+I+ DVELT LA++H L + E + Sbjct: 181 TVNSYRYRIFEKLDINSDVELTLLAVKHNLLDPEAV 216 >UniRef50_C8WS10 Two component transcriptional regulator, LuxR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WS10_ALIAD Length = 224 Score = 262 bits (670), Expect = 9e-69, Method: Composition-based stats. Identities = 71/211 (33%), Positives = 121/211 (57%), Gaps = 4/211 (1%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMP-GIG 61 V++VDDH LVR G+R IL + GI+VVGE SCGEDA+K + DV+LMD+ MP G+ Sbjct: 5 RVVIVDDHALVRQGLRLILHGVAGIEVVGECSCGEDALKAAVKDRPDVMLMDVHMPQGLD 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ R + + V++IMLT+ + K++ AG +G + K E+V+AI+ G Sbjct: 65 GITTARHLRQIAPQVRVIMLTMFDDRVHVEKMLDAGVSGIVFKHDDSSEIVAAIQHGQPG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Y++ Q+ + P +T LS RE ++++++ +G E+++ L++S KTV Sbjct: 125 HPYLSRRWGQRANAETVSPSRTA---ERLSPRETEVLVLLAQGYTNREVADALHISVKTV 181 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 ++R + ++ +H L A ++GL + Sbjct: 182 ETHRQHIMRRIGLHSRAALVRYAYQNGLVDP 212 >UniRef50_C1B8T3 NarL family two-component response regulator n=61 Tax=Bacteria RepID=C1B8T3_RHOOB Length = 276 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 71/209 (33%), Positives = 113/209 (54%), Gaps = 7/209 (3%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSM-PG 59 MI +LL DDH +VRAG+R +LE I+VVGEA+ + AV C T VD+VLMD+ PG Sbjct: 1 MIRLLLADDHAIVRAGLRALLEHEDDIEVVGEAATADAAVALCATTPVDLVLMDLRFGPG 60 Query: 60 IGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVY 119 G++ATR + ++++T + + + AGAAGYL K P E+++A+R+ Sbjct: 61 TSGVDATRNLRSLPNPPHVLVVTNYDTDADILDAVAAGAAGYLLKDTPPPELLAAVRAAS 120 Query: 120 SGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 +G ++ +A ++ P + LS RE+Q++ ++ G+ EI ++L LS Sbjct: 121 AGDSVLSPAVASKLMTRVRRPATS------LSPREIQVLTLVAAGRSNREIGKELFLSET 174 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHG 208 TV S+ +F KL + R G Sbjct: 175 TVKSHLVHIFGKLGVKSRTSANRAGPRAG 203 >UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92 Tax=Burkholderiales RepID=Q3JFS6_BURP1 Length = 282 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 126/211 (59%), Gaps = 1/211 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VL+ DDH LVR G+R IL++ G +V GEA + R+ V+++D+SMPG Sbjct: 68 MIKVLIADDHALVRDGLRHILQNASGYEVAGEAFDSATTIALVRSTPAQVLVLDLSMPGR 127 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+E ++I ++I++LT+H E + +AGA+GYL+K +A E+V A+ V S Sbjct: 128 NGVELIKQIKEEKPALRILVLTMHAEQQYAVRAFRAGASGYLTKESASSELVGAVTKVAS 187 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G Y++ +A++ A S EP +T P LS+RE + I GQ + +I+++L +S KT Sbjct: 188 GGVYVSLAMAERFAQSLNEPAET-LPHHRLSDREFDVFRRIASGQTLTQIADELCVSAKT 246 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V++Y+ R+ K+ + + L A+RH L + Sbjct: 247 VSTYKTRILEKMQMPHEAALVRYALRHKLID 277 >UniRef50_D1BCA8 Two component transcriptional regulator, LuxR family n=18 Tax=Bacteria RepID=D1BCA8_SANKS Length = 234 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 64/209 (30%), Positives = 106/209 (50%), Gaps = 6/209 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + V++ DDH +VRAGI +L I+VVGEA G AV RT + DVV+ D+ MP + Sbjct: 29 VRVVVADDHPVVRAGIVGMLGVESDIEVVGEAEDGRQAVDLARTLSPDVVITDLRMPVLD 88 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ ATR+I V++++LT + + + ++AGA GYL K E+V+ IR G Sbjct: 89 GVGATREIVALPGTVRVVVLTTYETDGEILRAVEAGATGYLLKDTPRAELVAGIREAARG 148 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Q + +A ++ L+ RE++++ + +G + +L +S TV Sbjct: 149 QTVLTPSVATRLVSQVGSRA------DRLTPREVEVLRAVARGLSNAAVGHELFISETTV 202 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 ++ R F KL ++ +A GL Sbjct: 203 KTHLIRAFGKLGVNDRTHAVTVATDRGLL 231 >UniRef50_A9VLR5 Two component transcriptional regulator, LuxR family n=31 Tax=Bacillaceae RepID=A9VLR5_BACWK Length = 595 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 58/214 (27%), Positives = 110/214 (51%), Gaps = 3/214 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 +I +L+VDD VR +R +L+ + + VVG A G A+ C V+LMD+ M + Sbjct: 382 LIRLLIVDDQPFVRESLRTLLDRYEDLNVVGLAEDGNQAIDLCGRLQPHVILMDLDMQHM 441 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EAT+KI + +++++ T + + ++ GA G+L K E+ + IR ++ Sbjct: 442 DGVEATKKIKQQWPHIRVLIFTTFQDTEQALESLRNGADGFLLKSIETLELANTIRLIHK 501 Query: 121 GQRYIASDIAQQMALSQ---IEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 G I ++ ++ IE ++++ L+ RE++I+ ++ KG + I+ +L LS Sbjct: 502 GGTLIDQGMSHKIFEKFDEQIETPQSKATAYELTAREIEILQLVAKGLRYTTIASRLYLS 561 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 TV +Y ++KL + E A+ G+ Sbjct: 562 NGTVRNYASTAYTKLGVRNKEEAVQKALEIGIIE 595 >UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6Y1_9BACT Length = 220 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 69/213 (32%), Positives = 122/213 (57%), Gaps = 3/213 (1%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 +LL DDH++VR G+R +LE ++ EAS G AV++ A D+V++D+SMP + G Sbjct: 8 RILLADDHDIVRRGLRTLLELRSDWEICAEASDGRAAVQFAEDLAPDIVILDLSMPELNG 67 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 LEA R+IA +++MLT+H + + AG GY+ K A +++ +A+ ++ G+ Sbjct: 68 LEAARRIAAHCPRSRMLMLTMHETEQFVREALAAGVRGYILKTDAGRDLANAVDALIRGE 127 Query: 123 RYIASDIAQQMA---LSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 + AS +A + + + + A L+ RE +I+ ++ +G+K ++ + LN+S K Sbjct: 128 TFFASRLAATIYAAEFAGMGRRRRSKSQAGLTPREREILQLLAEGRKNRDVGKALNISVK 187 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 T ++R R+ +KL I +L AIR+GL Sbjct: 188 TAETHRARIMAKLGIDSVADLVRYAIRNGLIAP 220 >UniRef50_D2PZY5 Two component transcriptional regulator, LuxR family n=2 Tax=Actinomycetales RepID=D2PZY5_9ACTO Length = 252 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 61/235 (25%), Positives = 111/235 (47%), Gaps = 22/235 (9%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+ DD ++R G+ IL+ + V +A GE+A++ DVVLMD+ MP + Sbjct: 11 IRVLVADDQGVIRTGLAMILDHEPDLTTVAQAGDGEEALRLIDRFDPDVVLMDIRMPVMD 70 Query: 62 GLEATRKIARST-----ADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIR 116 GL AT +I R+ + +++LT + ++AGA+G+L K P +V+A+R Sbjct: 71 GLVATERITRANQEAGRSRPAVLVLTTFDDEAYVLSAVRAGASGFLLKDTDPDLLVAAVR 130 Query: 117 SVYSGQRYIASDIAQQMALSQIEPEKT-----------------ESPFASLSERELQIML 159 +V+ G + + + +E E+ A LSERE +++ Sbjct: 131 AVHRGDSLVDPASTRVLLERCVELERQVGADPVAAAPHAADGRWTGLLAQLSERERDVLV 190 Query: 160 MITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 + +G +++ +L +S TV ++ + SKL + V+ +A G+ Sbjct: 191 WMARGLSNRDLANKLFVSETTVKTHVSSVLSKLGLSSRVQAVVVAYEAGVVRPGE 245 >UniRef50_D1CI66 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1CI66_THET1 Length = 218 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 117/212 (55%), Gaps = 3/212 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + VL+ DDH L R +R +LE G++VVGEA G++AV+ R DVVLMD+ MPG+ Sbjct: 1 MRVLIADDHALFRDSLRTLLEAR-GVEVVGEAETGKEAVELARELRPDVVLMDLKMPGMD 59 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GL ATR I+ +VK+++LT ++ + +++GA GY+ K + + + G Sbjct: 60 GLAATRMISAEMPEVKVVVLTASEDDEDLFEAVKSGALGYMFKDVRSDQFFELLEAASRG 119 Query: 122 QRYIASDIAQQMALSQIEPE-KTESPFASLSERELQIMLMITKGQ-KVNEISEQLNLSPK 179 + +A+++ +P + E L+ERE +I+ ++ +G E++E+L LS Sbjct: 120 EPAFTPGLARKLLREMSKPAGRAEREPEVLTEREQEILELLVQGVTSNKELAERLILSEN 179 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 TV + + KL++ ++ A++HGL Sbjct: 180 TVKYHLRNILDKLHLQNRTQVVAYALQHGLVR 211 >UniRef50_C7R398 Two component transcriptional regulator, LuxR family n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R398_JONDD Length = 230 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 6/218 (2%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 +++VDD LVRAG+R IL GI VV E + GE+AV + DVVLMD+ MP G Sbjct: 10 RIIIVDDDALVRAGLRMILGGDPGITVVAEGTHGEEAVSLYAAHQPDVVLMDIRMPVRDG 69 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 L AT+ I +++LT + K ++AGA G+L K +P ++V A+ G Sbjct: 70 LSATKDIVTRWPHANVLVLTTFDTDEFIVKALRAGARGFLLKDTSPPDLVRAVNLAGDGH 129 Query: 123 RYIASDIAQQMALSQI------EPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNL 176 ++ + Q+ + L+EREL + I +G+ EIS+ L + Sbjct: 130 PTLSPSVTAQLIAKVSEEPDTGRQRQARRMVEQLTERELDVAQQIAQGKSNQEISQTLYM 189 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 S TV ++ R+F+K ++ V++ L + T Sbjct: 190 SIPTVKTHISRIFTKFDVDNRVQIAIRMHDAHLGHPTT 227 >UniRef50_A0L9F1 Two component transcriptional regulator, LuxR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9F1_MAGSM Length = 206 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 128/210 (60%), Gaps = 4/210 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +++ DDH + R G+ +L + +++VGEA G+DA++ R DV L+D+SMPG+ Sbjct: 1 MIRIIMADDHTIFRQGLAHLLSAHQELEIVGEAGRGDDALQLIRDLNPDVALLDISMPGL 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GL+ +++ ++++LT+H + L K QAGA GY+ K A E++ AI +V + Sbjct: 61 NGLDVVKRVVEEKRPTRLLLLTMHDDPTLAIKAEQAGALGYVVKDNAFSELLDAILAVAA 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+R+++ +A+++ E E+ + LS RE +++ ++ GQ EI+ L +SPKT Sbjct: 121 GKRFVSEVVAEKV----NELERLDDLPVQLSPREKEVVRLVADGQTNKEIARSLGISPKT 176 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 V+++R R+ KLN+H ++ A+R GL Sbjct: 177 VDTHRTRLMRKLNLHTTADVVRYAMRMGLV 206 >UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJD7_9MICO Length = 207 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 117/207 (56%), Gaps = 4/207 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI V LVDDH+LVRAG+R +LE G+ VVGEA G++AV A DVVLMD+SMP + Sbjct: 1 MIRVYLVDDHQLVRAGVRTLLESDPGLSVVGEARDGQEAVAGIDAAASDVVLMDLSMPVM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EATR I + D ++++LT ++ +V+ AGA GY+ K A P ++++A+ + Sbjct: 61 DGVEATRAILSTHPDTRVLVLTSFSDRERVKEVLAAGAIGYVLKDAEPADLLAAVHAAAR 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+ I +A + S S LS RE Q++ ++ +G +++ L ++ +T Sbjct: 121 GEVPIDPRVAGALLPS----AGGPSVADRLSPRETQVLRLVAQGLANKQVARALGITERT 176 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRH 207 V ++ R+F ++ + A H Sbjct: 177 VKAHLGRVFREIGVLDRTSAALWARDH 203 >UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR2_THEYD Length = 213 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 76/209 (36%), Positives = 127/209 (60%), Gaps = 1/209 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + VL+VDDH L R G++ IL D IK EA G +A+ + D+V +D++M I Sbjct: 5 LKVLIVDDHTLFRKGLKEILLDTPYIKECKEAKSGYEAIDILSKESFDIVFLDIAMSDIN 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+E +KI + KI+ML+++ E + ++ GA+GYL+K A P+E++ A+ + G Sbjct: 65 GIETLKKIKILYPETKILMLSMYPEEQYAIRSLKCGASGYLTKSADPEELLKAVDKIIKG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 +Y+ ++++ I+ + P LSERE Q+ LMI KG+ + EIS++L++S KTV Sbjct: 125 GKYLPHTFSEKLL-HYIDKSEDIPPHEKLSEREFQVFLMIAKGKSLIEISKELSISIKTV 183 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 ++YR R+ KL + + E+ + AI+HGL Sbjct: 184 STYRARILEKLGLENNAEIINYAIKHGLI 212 >UniRef50_A6M052 Two component transcriptional regulator, LuxR family n=8 Tax=Firmicutes RepID=A6M052_CLOB8 Length = 219 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 59/213 (27%), Positives = 109/213 (51%), Gaps = 10/213 (4%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MINV+LVDD ++VR GI+ IL I ++ EA G+ +K + D++LMD+ MP + Sbjct: 1 MINVVLVDDQQIVREGIKIILSLDNEISILKEAENGKQLLKILQEIQPDIILMDIRMPFM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EAT+ + ++K+I+LT E+ + ++ GA GY+ K A +++ +I++ Y+ Sbjct: 61 NGVEATKIVKEKYNNIKVIILTTFNEDEYVLQGIRNGADGYILKDARSHDIIKSIKAAYN 120 Query: 121 GQRYIASDIAQQMALSQIEPE----------KTESPFASLSERELQIMLMITKGQKVNEI 170 G + + ++ + K + L++RE+ + ++ +G +I Sbjct: 121 GDILLDPAVTTKLIRAFNSISIDKQNSRIINKQKKKLELLTQREMDVAKLVAQGNSNKDI 180 Query: 171 SEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHL 203 L L+ TV +Y +F KL + EL Sbjct: 181 CHTLFLTEGTVKNYLTNIFEKLELSSRTELALF 213 >UniRef50_A8ZMB6 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZMB6_ACAM1 Length = 215 Score = 260 bits (666), Expect = 3e-68, Method: Composition-based stats. Identities = 69/212 (32%), Positives = 116/212 (54%), Gaps = 4/212 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +LLVDD L+R GI +LE + ++V G A+ G++A+K +++LMD+ MP + Sbjct: 3 IQILLVDDQYLIREGIASLLELEEDLEVAGMAANGKEAIKQAIDLKPNIILMDIRMPELN 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EAT KI +S +IIMLT + L + + AGA GYL K P ++ AI+ +G Sbjct: 63 GVEATAKIKQSLPHCQIIMLTTFDDEELIVQSLLAGACGYLMKDIPPDDLGQAIKLADAG 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESP----FASLSERELQIMLMITKGQKVNEISEQLNLS 177 +A ++A ++ S ++P L+ REL+++ ++ KG EI++ NLS Sbjct: 123 VFQLAPEVAGKLIGSLKTQRAGDAPKLPTDTPLTTRELEVLKLLAKGNTNKEIAKAFNLS 182 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 TV ++ + +L + + A+ HGL Sbjct: 183 EGTVKNHVSNILMRLGLRDRTQAAVYAVEHGL 214 >UniRef50_A9B4P1 Two component transcriptional regulator, LuxR family n=11 Tax=Bacteria RepID=A9B4P1_HERA2 Length = 257 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 66/231 (28%), Positives = 118/231 (51%), Gaps = 14/231 (6%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + VL+VDDH L R G+R L + IK++GE S E+ + + DVVL D+++P + Sbjct: 5 VKVLMVDDHPLFRQGVRWALSSERDIKIIGEGSSAEEGLVLISEHEPDVVLTDLNLPNMD 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLE TR I R ++ ++ML+V+ + ++AGAA Y SK +P+ + + +R V G Sbjct: 65 GLEFTRTIRRQYPNIGVVMLSVYESDEHAFNALRAGAAAYYSKEISPKTLATVLRRVARG 124 Query: 122 QRYI------ASDIAQQMALSQI--------EPEKTESPFASLSERELQIMLMITKGQKV 167 + I +A ++ EP+ S F+ LS+RE++++ I G Sbjct: 125 EYVINDVMFEDPRVADRILTQFRGLQTGIVAEPDLDISLFSPLSDREIEVLEHIASGATN 184 Query: 168 NEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLSSQ 218 +I++ L +S +TV ++ + KL+++ + A+R G + Sbjct: 185 KDIADALKISTQTVKNHISSILRKLSLNDRTQAVLYALRRGWIETPATLLE 235 >UniRef50_B0C7V6 Two-component response regulator n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7V6_ACAM1 Length = 222 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 64/217 (29%), Positives = 116/217 (53%), Gaps = 8/217 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I++LLV+DH L+R G++ +V+GEA G+ A+ ++VLMD+ +P + Sbjct: 6 IHLLLVEDHALMRMGLKGQFSLESDFEVIGEAENGQQAIDLAAQLQPNIVLMDIELPILD 65 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ AT+KI + D++++ L+ ++ ++ AGA GY K Q++++ IR + G Sbjct: 66 GISATQKIKATCPDIRVLALSAFGKDNQVVGMLAAGADGYCLKSIDWQQLLAVIRLIQGG 125 Query: 122 QRYIASDIAQQMALSQIEPE--------KTESPFASLSERELQIMLMITKGQKVNEISEQ 173 Y+ IA ++A + +P LS+RE +++ +I++G EI+ Q Sbjct: 126 GTYLDPQIAHKLASMLKSANTPTTAPAHRQTAPATVLSDREREVLQLISEGCSNQEIANQ 185 Query: 174 LNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 L LS T+ SY + +KL++ V+ A+R GL Sbjct: 186 LYLSLGTIKSYVRMILNKLSVDDRVQAAAKAVREGLI 222 >UniRef50_C6WIC9 Two component transcriptional regulator, LuxR family n=31 Tax=Actinobacteria (class) RepID=C6WIC9_ACTMD Length = 302 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 60/214 (28%), Positives = 110/214 (51%), Gaps = 2/214 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V++ DD L+R ++ ++V+G A GE AV DVVLMD+ MP + Sbjct: 71 IGVVIADDQALLRGSFEVLVGSAPDLRVLGTAEDGERAVAVAARVRPDVVLMDVRMPNVD 130 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EAT +I + A V++++LT + ++AGA+G+L K P ++++AIR V SG Sbjct: 131 GIEATARICAAQAGVRVLILTTFDLDEYVYAALRAGASGFLLKDTPPADLLAAIRVVASG 190 Query: 122 QRYIASDIAQQMALSQIEPEKTE--SPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 + ++ + +++ +++ RE +++ ++ +G EI+E L++S Sbjct: 191 EALLSPSVTRRLITEFAARPAARPLPALDAVTAREREVLRLVAEGLSNTEITEALHVSRG 250 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 T+ ++ R+ KL +L A GL A Sbjct: 251 TLKTHVGRLLHKLGARDRAQLVIAAYESGLVTAG 284 >UniRef50_A8L3K7 Two component transcriptional regulator, LuxR family n=16 Tax=Actinomycetales RepID=A8L3K7_FRASN Length = 244 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 60/202 (29%), Positives = 106/202 (52%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V ++DDHE+VR G+R+ L I+VVGEA +A++ V ++D +P Sbjct: 36 IRVFVLDDHEIVRNGLRQTLARHDDIEVVGEAGLAAEALRRIPALHPHVAVLDGRLPDGS 95 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++ R++ + DV ++LT + ++ + AGAAGY+ K ++V AIR+V SG Sbjct: 96 GIDVCREVRSALPDVACLILTSYDDDEALFSAIMAGAAGYVLKEIRGNDLVGAIRTVASG 155 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Q +A + +++ + + A+L++RE +I+ +I G +I +L LS KTV Sbjct: 156 QSLLAPSVTRRVLERLRDGPSEDPAMATLNQREREILQLIADGLTNRQIGTRLGLSEKTV 215 Query: 182 NSYRYRMFSKLNIHGDVELTHL 203 +Y + KL + + Sbjct: 216 KNYVSSILEKLGLASRTQAAVY 237 >UniRef50_D0LE76 Response regulator receiver n=2 Tax=Actinomycetales RepID=D0LE76_GORB4 Length = 228 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 61/213 (28%), Positives = 110/213 (51%), Gaps = 1/213 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VLLVDD EL+R G+RRIL G +VGE + G + ++ DVV+MD+ M + Sbjct: 14 IRVLLVDDQELIRTGLRRILRVRDGFHIVGECADGSEVPAAVAEHSPDVVVMDLRMRNVD 73 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ AT +A +++LT ++ L + ++AGAAG++ K + + ++ A+R+V Sbjct: 74 GITATSMLAALNDPPPVLVLTTFDDDKLLSGALRAGAAGFILKDSPAESLIWAVRAVVRD 133 Query: 122 QRYIASDIAQQMALSQIEPEKTE-SPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 ++ + ++ + + L+ERE ++ ++ +G+ EI+ L +S T Sbjct: 134 GAFLDPAVTGRVLTGYRRSTTGDIATPDELTERETDVLRLVARGRTNAEIAAGLGISEVT 193 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 V S+ +F+KL++ A H L E Sbjct: 194 VKSHINHIFTKLDLRDRAAAIVYAFDHSLVLPE 226 >UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 Tax=Bacillales RepID=C0Z7M8_BREBN Length = 602 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 65/221 (29%), Positives = 113/221 (51%), Gaps = 11/221 (4%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 +I +++VDDH +R +R ILE + ++VVG A G AV+ C D+VLMD+ MP + Sbjct: 382 IIRLVIVDDHSFIRESLRSILEGQRDLRVVGLAEDGAQAVELCEELEPDLVLMDLEMPNM 441 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+ AT++I ++I++L+ + ++M++GA GYL K +E+ IR V+ Sbjct: 442 DGITATKRIKEKWPGIRILVLSTFQDTEKAKEIMRSGADGYLLKSIESRELAETIRLVHR 501 Query: 121 GQRYIASDIAQQMALSQ-----------IEPEKTESPFASLSERELQIMLMITKGQKVNE 169 G IA D+ +M Q + + + L++RE +I+ M+ +G + Sbjct: 502 GGTMIAQDLFHKMLDGQPVNGQEDLLVAPKQSEKDENAYGLTKREQEILQMLAQGMRYKT 561 Query: 170 ISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 I+ +L LS TV +Y ++ KL + + GL Sbjct: 562 IASKLYLSDGTVRNYASALYDKLGVRNRDDAVQKGKMEGLV 602 >UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 Tax=Vibrio RepID=C9QDP7_VIBOR Length = 209 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 60/211 (28%), Positives = 114/211 (54%), Gaps = 2/211 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI ++L DDH L++ G++ LE + ++ G +A++ DV+L+D++MP + Sbjct: 1 MIRLILADDHRLMQDGLKSRLEREDNLDIIACVGTGTEALEATLELKPDVLLLDINMPNL 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+E ++A++++ +IML++H + ++AGA GY+ K +E+V AI V Sbjct: 61 NGIEVLEQLAKTSSATSVIMLSMHDSRDYVVRSVKAGAKGYVLKDVGSEELVMAINQVAQ 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+ Y+ + ++ E + + +LS+RE ++ I G EI++ L++S +T Sbjct: 121 GRSYLCPQASDRLLEQINEAPEEKD--DTLSKRESDVLKAIANGAGNKEIADSLHISVRT 178 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V ++R R+ KL L LA++ GL Sbjct: 179 VETHRLRIKKKLGATSTAALVKLALQKGLVT 209 >UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M4_MAGSA Length = 209 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 126/210 (60%), Gaps = 3/210 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +L+ +D +LVR G+ +L + + +VGEA G+ A++ RT A DVVLMD+SMP + Sbjct: 3 VRILIAEDQQLVRQGLVALL-AVDDVTIVGEAEDGKGAIEMARTLAPDVVLMDLSMPELD 61 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR+I + V++++LTV A+ + AGA GY K E+++AI +V +G Sbjct: 62 GVEATRRIKQVAPQVRVLVLTVANCERRVAEALAAGADGYALKKLGHGELMAAINAVCAG 121 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + Y+ +++ + +E SL+ RE +++ +I +G K EI+++L ++ KTV Sbjct: 122 KTYLGPGLSEDLVKEYLEGSDMGGG--SLTAREREVLQLIARGHKNREIADELGIAIKTV 179 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++R ++ KL++H EL AIR GL Sbjct: 180 ETHRTKIMQKLDLHNSAELAAYAIRRGLIE 209 >UniRef50_Q1LE49 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderiaceae RepID=Q1LE49_RALME Length = 264 Score = 259 bits (663), Expect = 5e-68, Method: Composition-based stats. Identities = 66/212 (31%), Positives = 121/212 (57%), Gaps = 3/212 (1%) Query: 4 VLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGL 63 VL+V+DH L+RAG+R +L G V GEA G +A + + D++LMD+S+PG+ G+ Sbjct: 7 VLIVEDHNLLRAGLRSMLSAQMGYHVAGEARDGREACQLAISLCPDLILMDLSLPGMNGI 66 Query: 64 EATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQR 123 +A I R + ++II L+VH + + ++AG GY+ K + ++V+A+R V G++ Sbjct: 67 DAIAAIKRRSPGIRIIALSVHQNDEYVREALRAGVDGYVLKDTSFDDLVTAMRVVLLGKK 126 Query: 124 YIASDIAQQMALSQIEP---EKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 +++ ++ + S + ++ + L+ RE ++ ++ +G+ ++ +NLSPKT Sbjct: 127 HLSPELYGNLVESYVSGHEMSTAKTGWDLLTARERSVLKLVAEGRSNRQVGIYMNLSPKT 186 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 + YR + KL I EL +AI GL + Sbjct: 187 IEKYRASLMRKLGITNLTELVLIAISMGLITS 218 >UniRef50_Q67JS2 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67JS2_SYMTH Length = 211 Score = 259 bits (663), Expect = 5e-68, Method: Composition-based stats. Identities = 63/209 (30%), Positives = 115/209 (55%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+VDDHEL+R G++ +L + ++VVGEA+ G +AV CR+ DVV++D +P + Sbjct: 3 IRVLIVDDHELLREGLKSLLSREEDMEVVGEAAGGREAVALCRSLRPDVVVLDARLPDVD 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+E R++ +V ++MLT +++ L ++AGA GY+ K ++ +IR+V G Sbjct: 63 GVEVCRQLQEEMPEVAVLMLTTFSDSDLVLGAVRAGARGYVVKDVLGMDLKRSIRAVARG 122 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + + + + P + L+ ++L I+ ++ +G EI+E++ LS KTV Sbjct: 123 EVAMDPKVVGYLMQQMRSPSADKEERIPLNRQQLAIIRLVAQGYTNREIAERMFLSEKTV 182 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 Y ++ + VE +A ++G Sbjct: 183 KGYLAEAMRRMGVKNRVEAAMVASKNGWI 211 >UniRef50_A6TVR4 Two component transcriptional regulator, LuxR family n=5 Tax=Firmicutes RepID=A6TVR4_ALKMQ Length = 208 Score = 259 bits (663), Expect = 6e-68, Method: Composition-based stats. Identities = 61/206 (29%), Positives = 113/206 (54%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + VL+VDD L+R ++ +++ VVG AS G++A ++C+ A D++LMD+ MP + Sbjct: 1 MKVLIVDDDALIRDSLKILIDLEADFTVVGTASNGQEAFEFCKEYAPDLILMDIRMPIMD 60 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ AT+ I S ++II+LT ++ + ++ GA GY+ K + ++ ++R+V G Sbjct: 61 GVLATKMIKESFGSIRIIILTTFKDDQYIKEALKNGAQGYILKSQSADSIIESLRTVSKG 120 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 ++IA + E ++ L+ERE +I+ + +G EIS L LS TV Sbjct: 121 NVVFETEIASVLTSMLKEEKEKHHLDLQLTEREHEIIKWVGEGLSNREISAALYLSEGTV 180 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRH 207 +Y ++ KLN+ +L +++ Sbjct: 181 RNYVTQLLEKLNVRDRTQLAIFYLKY 206 >UniRef50_D2B5Y0 Response regulator receiver protein n=14 Tax=Actinobacteria (class) RepID=D2B5Y0_STRRD Length = 227 Score = 259 bits (663), Expect = 6e-68, Method: Composition-based stats. Identities = 64/217 (29%), Positives = 110/217 (50%), Gaps = 6/217 (2%) Query: 4 VLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGL 63 VL+VDD LVRAG+ +L I+VV +A G + +A DVVLMD+ MP + GL Sbjct: 11 VLIVDDDPLVRAGLVMMLGGAPDIRVVAQAGDGTQVLPLVDRHAPDVVLMDIRMPVMDGL 70 Query: 64 EATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQR 123 AT + ++I+LT + + ++AGAAG+L K P E+V+A+R V G Sbjct: 71 AATEVLRARPGAPEVIVLTTFDADDHVLRALRAGAAGFLLKDTPPDEIVTAVRQVARGYP 130 Query: 124 YIASDIAQQMALSQ------IEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 ++ + +++ + A L+ RE ++ + + +G+ EI L+LS Sbjct: 131 VLSPVVTRRLIARVADSGHDRRRTRAGDRLALLNAREREVAVALGQGRSNAEIGAVLHLS 190 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 TV ++ + +KL ++ V++ L GL + + Sbjct: 191 VPTVKTHVSGILTKLGLNNRVQIALLVHDAGLLDDQE 227 >UniRef50_B1KE04 Two component transcriptional regulator, LuxR family n=2 Tax=Alteromonadales RepID=B1KE04_SHEWM Length = 206 Score = 258 bits (662), Expect = 6e-68, Method: Composition-based stats. Identities = 59/208 (28%), Positives = 109/208 (52%), Gaps = 4/208 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + + +VDDH + R G+ L +VG+A+ G++A++ D+VLMD+SMP + Sbjct: 1 MRIFIVDDHPIFREGLIARLSMDDDFVIVGQAANGKEALEKMPNLMPDIVLMDISMPEMN 60 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++A ++KI++L++H + V+ G GY K + E+ A+R +++G Sbjct: 61 GMDAAEIFKDKFPEIKILILSMHDDKEYVLSVLNRGVRGYALKDISAAEMFYALRVIHNG 120 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Y + I+ + S EP+K L+ RE ++ ++ G E++ +L++S +T+ Sbjct: 121 GIYYSRAISDLLVQSSQEPDKNT----VLTTREQTVLRLLASGLNNKELARELDISVRTI 176 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 ++R + KL I L AI HGL Sbjct: 177 ETHRRNIKDKLAIKTSAGLVRYAIDHGL 204 >UniRef50_C7RMN3 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMN3_9PROT Length = 213 Score = 258 bits (662), Expect = 6e-68, Method: Composition-based stats. Identities = 74/208 (35%), Positives = 130/208 (62%), Gaps = 2/208 (0%) Query: 4 VLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGL 63 +LLVDDH +VR G+R +L ++VV EA E A+ R N DV L+D+ +PG GGL Sbjct: 8 ILLVDDHAVVRGGLRLLLAQTDDMEVVSEAENAEQAISMIRQNEFDVALVDIGLPGKGGL 67 Query: 64 EATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQR 123 + ++I + ++ML+++ E + ++AGA+GYL+K + P +++AIR V G R Sbjct: 68 DLLKQIKAERPRIAVLMLSMYAEEVYAVRALKAGASGYLTKNSPPGTLLAAIRKVAGGGR 127 Query: 124 YIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVNS 183 +++ + +Q+A+ + K+ S +LS+RE++++ + G+ + +I+E L+LSPKTV + Sbjct: 128 HVSPALLEQLAVEVGQGRKSAS--DALSDREIEVLRRLASGESLTQIAEALHLSPKTVTT 185 Query: 184 YRYRMFSKLNIHGDVELTHLAIRHGLCN 211 YR R+ K +H + ELT A+ G+ + Sbjct: 186 YRARIVEKTGLHSNAELTRYALDKGMLS 213 >UniRef50_B4D808 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D808_9BACT Length = 212 Score = 258 bits (662), Expect = 6e-68, Method: Composition-based stats. Identities = 66/212 (31%), Positives = 108/212 (50%), Gaps = 8/212 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +LLVDDH +VR+G+ +L VV EA E AV R + DV LMD+ MPG Sbjct: 7 IRLLLVDDHFVVRSGLAMLLAQQDDFAVVAEADDAEQAVAHYRQHRPDVTLMDVRMPGAS 66 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA ++I D ++IMLT + + + ++AGA GYL K E+ +A+R V++G Sbjct: 67 GIEALQRIRGEFPDARVIMLTTYDLDEDVFRALEAGAVGYLLKSVRHAELFAAVRKVHAG 126 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 +R + + + K + + LS RE++ + ++ +G EI L ++ +T Sbjct: 127 ERCVPQSLETR--------CKNGALRSRLSPREVETLDLLARGFSNREIGSALGVTERTA 178 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 ++ + KL E A + GL A+ Sbjct: 179 KAHVQAILVKLEAADRAEAVDAAYKRGLLRAD 210 >UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ectothiorhodospiraceae RepID=B8GSX5_THISH Length = 220 Score = 258 bits (662), Expect = 7e-68, Method: Composition-based stats. Identities = 103/218 (47%), Positives = 150/218 (68%), Gaps = 4/218 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIK---GIKVVGEASCGEDAVKWCRTNAVDVVLMDMSM 57 MI+VLLVDDHELVR GIR +L++ GI+VVGEA GE+A+ + DVVLMD++M Sbjct: 1 MIDVLLVDDHELVRMGIRGLLDERAAVTGIQVVGEAHSGEEALVEAKRLKPDVVLMDINM 60 Query: 58 PGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRS 117 PGIGGL ATR+I + VK+++LT E P+P V++AGA+GYL+KG +E+++AI+ Sbjct: 61 PGIGGLVATRRIVEAQPSVKVLVLTAMDEGPVPRWVLEAGASGYLTKGCRIEEMIAAIQG 120 Query: 118 VYSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 G+R+I+ +AQ++AL + + +PF LS RE QI+LMI +GQ I+ LN+S Sbjct: 121 AMQGERHISPAVAQRLALGGL-AKGQANPFDELSGRERQILLMILQGQTPQAIATALNIS 179 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETL 215 PKTV++Y+ R+ KL I D++L LA +HGL + + Sbjct: 180 PKTVSTYKCRVMGKLGISNDMQLVTLAAQHGLIASREV 217 >UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacillales RepID=C0ZDE8_BREBN Length = 214 Score = 258 bits (662), Expect = 7e-68, Method: Composition-based stats. Identities = 70/213 (32%), Positives = 122/213 (57%), Gaps = 2/213 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMP-G 59 MI VLLVDDH ++R G+R +LE IK+VGE+ G DA+ DVVLMD+S+P G Sbjct: 1 MIRVLLVDDHTMIRKGLRVLLESYSQIKIVGESHTGNDAILKANQLKPDVVLMDLSLPNG 60 Query: 60 IGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVY 119 + G A+++I +S VKI++LT+H E + + GA GY+ K + + + AI VY Sbjct: 61 LDGFTASKEIRKSNPLVKIVILTMHDEEIFVQEAITVGAHGYILKNSHGELLFQAIVEVY 120 Query: 120 SGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 G+ + + ++Q++ + + P + L+ RE +++ +I G E++++L +S K Sbjct: 121 RGKCFYKTSVSQEIINLWLRSDAKTLP-SVLTLREKELVRLIVLGYSNKEMADKLLISVK 179 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 TV +++ + KL + +L AI++ + Sbjct: 180 TVENHKTNIMQKLGLDSKHQLIQYAIKNRYLDL 212 >UniRef50_B9XAM6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=B9XAM6_9BACT Length = 209 Score = 258 bits (662), Expect = 7e-68, Method: Composition-based stats. Identities = 63/211 (29%), Positives = 116/211 (54%), Gaps = 8/211 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +L+ DDH +VR G+ ++ ++VV EA+ G A++ D+ LMD+ MP Sbjct: 7 IRILIADDHYVVRMGLIALVNTEPDMEVVAEAADGAQALELFAKCNPDLALMDLRMPVKS 66 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++AT +I A ++MLT + K +QAGA GY+ K + ++++ A+R+V +G Sbjct: 67 GVQATLEIRNRFATACVLMLTAFDGDEDIHKALQAGAQGYVLKSSTGEKLIPALRAVAAG 126 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 QR+I ++A ++AL + F LS RE+Q++ + +G EI++ LN++ T Sbjct: 127 QRWIPKEVANRLALR--------NSFEQLSPREVQVLSELARGLANKEIADVLNITEHTT 178 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 + + +KL + E +A++ G+ + Sbjct: 179 KDHLKSILAKLRVADRTEAVTVALQRGIIHL 209 >UniRef50_Q024A4 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q024A4_SOLUE Length = 225 Score = 258 bits (661), Expect = 8e-68, Method: Composition-based stats. Identities = 66/209 (31%), Positives = 111/209 (53%), Gaps = 8/209 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+ DDH +V G+ I+ + VVG+A G +AV R ++ DV+LMD+ MPG+ Sbjct: 23 IRVLIADDHPVVCLGLLGIINGQPDMTVVGQAKTGTEAVALARKHSPDVILMDLRMPGMS 82 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EAT I + +I+LT + + K + AGA YL KG + +++ AIRSV +G Sbjct: 83 GVEATEVIRAERPESAVIVLTTYQGDEDIRKALAAGAQSYLLKGMSHLKLLEAIRSVRTG 142 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Y I + A+LS RE+ I+ +I +G EI++ LN++ TV Sbjct: 143 HTYFPRAI--------RNSVPGKLNRAALSPREMDILRLIVRGLSNQEIADALNITRGTV 194 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 + + +L+++ + +A++ G+ Sbjct: 195 KWHVNIILRRLDVNDRTQAVVVAVQRGIV 223 >UniRef50_C0GJ72 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ72_9FIRM Length = 212 Score = 258 bits (661), Expect = 9e-68, Method: Composition-based stats. Identities = 67/206 (32%), Positives = 114/206 (55%), Gaps = 2/206 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V+LVDDH +VR G+R +LE ++V GEA AV C A DV+L+D +P Sbjct: 5 IKVMLVDDHSVVRQGLRLLLELDDTMEVCGEAETLTGAVAVCAEVAPDVILLDFKLPDGD 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ + R VKII+LT + ++ L + ++AGA GYL K +E+++ I++V+ G Sbjct: 65 GIIGCGNLKRQFPQVKIIILTAYADDHLVTETIKAGADGYLLKNVESEELINTIQAVHKG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Q + + + + + + + +L+ +E+QI+ MI+ G+ EI+E + +S KTV Sbjct: 125 QSVLDPSVTEILFDNIKSQQPKKE--HNLTPKEVQILDMISVGKANKEIAEIMKISDKTV 182 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRH 207 +Y + KLN+ E +R+ Sbjct: 183 RNYVSNILQKLNVSNRTEAASYWMRN 208 >UniRef50_C0Z4M7 Two-component response regulator n=7 Tax=Bacillales RepID=C0Z4M7_BREBN Length = 235 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 66/226 (29%), Positives = 118/226 (52%), Gaps = 16/226 (7%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V+LVDD ++R G+ +++ K ++V GEAS GE+AVK DVVLMD+ MP + Sbjct: 10 IRVVLVDDQTMIRQGLGYVIKMQKDMEVSGEASNGEEAVKIVGEIIPDVVLMDVQMPNMS 69 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G++ATR+I R VK+++LT ++AGA GY+ K + Q+++ IR + G Sbjct: 70 GIDATREITRLHPSVKVLILTTFDTYDYIVDGIRAGAVGYMLKDSDSQDMLDLIRRAHQG 129 Query: 122 QRYI-----ASDIAQQMALSQIEPEKTESP-----------FASLSERELQIMLMITKGQ 165 + A +A+ + Q E F L++RE ++ ++ G+ Sbjct: 130 EALFYTATAAKALAEVLQFQQKNYEPDSDADCDSTLPPLVMFDQLTDRERDVLEQLSYGK 189 Query: 166 KVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 + ++I++ L +S TV ++ +R+ K+ + + AIR+ + Sbjct: 190 RNDQIAQHLLISGGTVKTHIHRILQKMGVEDRTQAVAKAIRYKIVK 235 >UniRef50_A8L345 Two component transcriptional regulator, LuxR family n=33 Tax=Bacteria RepID=A8L345_FRASN Length = 249 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 9/217 (4%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V++ DD E+VR G+R IL+ GI VVG A G AV+ R DV L+D+ MP + Sbjct: 23 IRVVVADDQEIVRTGLRMILDAQPGIVVVGVAVDGRRAVELARRLRPDVCLIDIRMPVMD 82 Query: 62 GLEATRKIARSTADV----KIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRS 117 G++AT + + V ++++T + ++AGA G+L K A P + A+ + Sbjct: 83 GIQATLAL--AGPGVADPLAVVVITTFDLDEYVYAALRAGARGFLLKDAGPDLLAQAVHA 140 Query: 118 VYSGQRYIASDIAQQMALSQIEPEKTE---SPFASLSERELQIMLMITKGQKVNEISEQL 174 G IA ++ ++ + P +L++RE Q++ + G+ +EI+ L Sbjct: 141 AACGDALIAPNVTARLLATFAGSGPAPVPAQPVEALTDREEQVLATVAGGRTNSEIAADL 200 Query: 175 NLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++S TV ++ + +KL VE+ A + G + Sbjct: 201 HISLSTVKTHIASLMAKLGARNRVEIALWAYQTGRVD 237 >UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1Z2_9FIRM Length = 209 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 75/209 (35%), Positives = 125/209 (59%), Gaps = 2/209 (0%) Query: 5 LLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGLE 64 ++VDDH L+RAGI+ +L++ V EA GE+A++ +D+V+MD+SMPG+GGL Sbjct: 1 MIVDDHLLIRAGIKLLLKNTSAYTVTAEAESGEEALRLLAQQPIDLVIMDISMPGMGGLA 60 Query: 65 ATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQRY 124 R+I VKI++L++H + K MQ GA GYL K +A E+ A++ + G+RY Sbjct: 61 CIREIRAHYPAVKILVLSMHEDEEYIYKAMQYGAMGYLPKTSADNELFDALQVLSQGRRY 120 Query: 125 IASDIAQQMALSQIEPEK--TESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVN 182 ++ + Q + P + + P + L+ RE ++ + G + EI+EQL+LS KTV+ Sbjct: 121 LSPNAQQSLMDIMFRPAEEAADDPRSVLTAREREVFDELIHGYTITEIAEQLHLSVKTVD 180 Query: 183 SYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 +++ ++ KL+ EL LA+R+GL Sbjct: 181 THKKHIYEKLHCSRRSELVTLALRNGLLQ 209 >UniRef50_B4D831 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B4D831_9BACT Length = 209 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 64/213 (30%), Positives = 113/213 (53%), Gaps = 8/213 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+VDDH ++R G+ + + + +VGEA+ G ++ R + DVV MD +PG Sbjct: 5 IRVLIVDDHAMMRLGLVEAIAGERDLTLVGEAANGTQCLEQYRKHQPDVVTMDFRLPGAD 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G E+T + D ++++L+V + ++AGA GY+SK A +EV+ AIR V G Sbjct: 65 GAESTAHLRTEFPDARVVVLSVFEGEEDIWRAVEAGAMGYVSKSAEVEEVLEAIRCVVGG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + Y + IA ++A + +L+ RE Q++ I G EI+ L++S TV Sbjct: 125 ETYFPAPIASKLASRRTR--------DALTPREHQVLHHIVAGLSNKEIAAALHMSEATV 176 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 + +KL++ + +A++ G+ + +T Sbjct: 177 KLHISNTLAKLHVADRTQAAIVAVQRGIIHLDT 209 >UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6ADI3_LEIXX Length = 207 Score = 257 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 55/213 (25%), Positives = 112/213 (52%), Gaps = 7/213 (3%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPG- 59 MI ++LVDDH ++R G+R +L+ + +VVG+ E+ ++ D+VLMD+++ G Sbjct: 1 MIRIVLVDDHPILRHGMRTLLDTQEDFEVVGDCGDPEEYRLLLKSARPDIVLMDLALGGD 60 Query: 60 IGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVY 119 G+ T ++ +++ T + + + + AGA+GYL K + P E+ +AIR+ Sbjct: 61 TDGVALTAHTRATSPSTAVLVFTTYDSDADFVRSLDAGASGYLLKDSTPVELFAAIRTAR 120 Query: 120 SGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 G ++ +A ++ +P SL+ RE++++ ++ G+ ++ E+L +S Sbjct: 121 DGGSALSPAVASRLMDRMR------APQESLTPREIEVLALLATGRTNRQVGERLFVSET 174 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 TV ++ +F+KL + A++ GL Sbjct: 175 TVKTHVNHIFTKLGVDTRAAAVSRAMKEGLIRL 207 >UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXM6_EIKCO Length = 215 Score = 257 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 66/213 (30%), Positives = 108/213 (50%), Gaps = 3/213 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +LLVDDH L R G+ +L G ++V EA+ G + VK R + D+VL+D+ MP + Sbjct: 6 IRILLVDDHPLFRRGLSFLLAQEYGFEIVAEATDGLEGVKLARFHRPDLVLLDVEMPVMN 65 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G EA ++ + ++MLT+ + K ++ GA GY+ K A +V AIR +G Sbjct: 66 GPEALAQMLDFQPGLPVLMLTISEDADNLKKCLELGARGYILKNADTDFLVEAIRQAVAG 125 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Q+ ++ ++ Q P + + SL++RE ++ + G I+ ++ LS TV Sbjct: 126 QQTVSPEMNNA---GQSIPPEHSAILDSLTQRERDVLRYVAGGISNKMIARRMFLSENTV 182 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 ++ +F KLNI V A GL E Sbjct: 183 KAHMQNIFRKLNIDNRVRAAVYARELGLDKEEE 215 >UniRef50_B2JSN3 Two component transcriptional regulator, LuxR family n=28 Tax=Proteobacteria RepID=B2JSN3_BURP8 Length = 210 Score = 257 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 127/210 (60%), Gaps = 2/210 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +L+ DDH +VR G+++I+ I V EA+ G + V RT AVD++L+DM+MPGI Sbjct: 1 MIRILIADDHAIVRGGLKQIIATTNDIVVAAEAAQGSEVVDKLRTCAVDLLLLDMTMPGI 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G++ R++ + +++L++H E + ++ ++AGA GYL+K + P +++AIR + Sbjct: 61 SGVDLIRRVRAEQPALPVLVLSIHDEAQVASRALRAGATGYLTKDSDPDVLLAAIRKLAD 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G R+I + M + P LS+RE Q++ M+ G+ +NEI++ LS KT Sbjct: 121 GGRFIDPKLVDAMVFETHRGDMP--PHEVLSDREFQVLQMLAAGKSINEIADICALSAKT 178 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 +++++ R+ KL + + E+ AIRHGL Sbjct: 179 ISTHKMRLMQKLGLANNAEVIRYAIRHGLI 208 >UniRef50_D2PZN7 Two component transcriptional regulator, LuxR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PZN7_9ACTO Length = 242 Score = 257 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 64/218 (29%), Positives = 115/218 (52%), Gaps = 9/218 (4%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + V+L DD L+R R +L+ I VVGEA GE+AV R DVV+MD+ MPG+ Sbjct: 16 LRVVLADDQALLRGAFRTLLDSTDDIAVVGEAGDGEEAVALTRRTHPDVVVMDIQMPGMD 75 Query: 62 GLEATRKIARSTADV---KIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSV 118 GL AT +I D+ ++++LT + + A+ ++AGA+G++ KG ++ A+R++ Sbjct: 76 GLTATAQICA-DPDLRASRVLILTTYETDEYVAQALRAGASGFIGKGIDADGLIDAVRTI 134 Query: 119 YSGQRYIASDIAQQMALSQIEPEKTESPFA-----SLSERELQIMLMITKGQKVNEISEQ 173 G ++ + + + +P +L+ RE +++ ++ G EI+++ Sbjct: 135 ADGDALLSPAATRSLVARFLATPVDTAPRDVERLVALTPREREMVALVATGLSNLEIADR 194 Query: 174 LNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 + +SP TV ++ R +KL +L +A R GL Sbjct: 195 MYVSPFTVRAHVQRAMTKLEARDRAQLVAIAYRTGLAR 232 >UniRef50_C1A730 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A730_GEMAT Length = 209 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 58/210 (27%), Positives = 108/210 (51%), Gaps = 8/210 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +LLVDDH ++R G+ +L + G++V+G+A G A+ R DVV+ D+ M + Sbjct: 6 IRILLVDDHAILREGLAALLNGVDGMQVIGQAGDGATAIDLYRNLLPDVVICDLRMVPMD 65 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G E T I ++I+LT + + + ++AGA+ YL K P +++ + +VY+G Sbjct: 66 GTEVTSTIRAEFPAARVILLTTYDTDEEVFRGLRAGASSYLLKDVEPAQLIDTVHAVYAG 125 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 ++ I IA ++A +L+ R+L+++ + +G+ EI+ L +S TV Sbjct: 126 RKAIDPSIAAKLAEHVAS--------DALTARQLEVLRSLAEGRSNIEIANTLYISEGTV 177 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 ++ + KL + + I+ GL Sbjct: 178 KAHIKAILQKLGARDRTQAVTIGIKRGLIR 207 >UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, putative n=2 Tax=Shewanella RepID=B8CN77_SHEPW Length = 206 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 65/209 (31%), Positives = 113/209 (54%), Gaps = 5/209 (2%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI VLLVDDH L R G+R L I+V+ EA G+ A++ VD+VL D++MP + Sbjct: 1 MIRVLLVDDHPLFREGLRYRLSLDSDIEVLAEADNGQQALEILNKMPVDLVLTDINMPQM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+ I K++ML++H M+ GA GY+ K +E++ AI+ V + Sbjct: 61 DGMYLLELIKEQELSCKVVMLSMHDNKEYIMATMRYGADGYILKDVPGKELIEAIKKVAA 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G+RY ++D+ ++ ++ A +++RE ++ +I+ G I++++++S +T Sbjct: 121 GKRYFSADVINTLSQELASGKQ-----ALVTQREQLVLRLISLGMNNKRIAQEMDVSVRT 175 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 V +++ + KL I L AI HGL Sbjct: 176 VETHKRNIKQKLMIDSTAGLVRYAIDHGL 204 >UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8B3_9BACT Length = 212 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 68/216 (31%), Positives = 113/216 (52%), Gaps = 7/216 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V+L DDH L R G++ LE + + +VGEA+ G++A K DV L+D+ MPG Sbjct: 4 IRVILADDHPLTRQGLKAYLEREENVALVGEAADGDEAWKLIEELKPDVALLDIRMPGAD 63 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ R+I + V IMLT + ++AGA G++ K + ++ AI++V +G Sbjct: 64 GITLARRIKENKLPVAAIMLTSYDSQQYVLASLKAGAKGFVLKTTSAGALMKAIQTVATG 123 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 ++ S++A + E +LS RE +++L +G E++ QL +S +TV Sbjct: 124 SLFLDSEVASVV-------GAQEELTEALSPREREVLLCAARGLSSKEVAAQLYISERTV 176 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLSS 217 ++ ++ KL H E LA++HGL E L Sbjct: 177 QTHLASVYDKLGAHNKTEAMLLALKHGLMTLEELLD 212 >UniRef50_D2SFS4 Two component transcriptional regulator, LuxR family n=2 Tax=Frankineae RepID=D2SFS4_9ACTO Length = 220 Score = 256 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 114/207 (55%), Gaps = 4/207 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI+VL+VDDH L+R G+ ++ ++VVG A+ G +AV+ A VVLMD+SMP + Sbjct: 1 MIDVLVVDDHALMRTGLSGLIAAAGDMRVVGTAADGAEAVEEVARLAPHVVLMDLSMPVL 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+ ATR+I V++++LT ++ + + AGA GY+ K P ++++AIRS Sbjct: 61 DGVAATRRIVEEHPSVEVLVLTSFSDRQRVIEALDAGAGGYVLKDTEPADLLAAIRSTAR 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G + +A+ + ++ P + A L+ERE +++ ++ G +I+ +L + T Sbjct: 121 GHSPLDPRVARTVLHARRSPVRA----AELTEREQEVLALVGHGLANKQIARRLGIREST 176 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRH 207 V ++ +F ++ + T A H Sbjct: 177 VKAHLTSVFQRIGVRDRTSATLWARTH 203 >UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paenibacillaceae RepID=C0ZBD9_BREBN Length = 215 Score = 256 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 64/209 (30%), Positives = 113/209 (54%), Gaps = 1/209 (0%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 VL+ DDH + R IR +L+ +V+GEA GE+A C D+VLMD++MP G Sbjct: 5 RVLIADDHPMARMAIRSLLDPDPSFEVIGEAQNGEEAFLLCGQIQPDLVLMDINMPKWSG 64 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 LEATR++ ++ +K+++L+V + +Q GA GYL K P + ++ + ++ Sbjct: 65 LEATREVKKAYPHIKVVILSVSDDVADLITAIQFGAQGYLLKNLEPDDWINYLHALLGED 124 Query: 123 RYIASDIAQQMALSQIEPEKTESPFAS-LSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + ++A ++ + E T+ + L+ RE +I++ + G+ EISE L ++ TV Sbjct: 125 SELTREMATRLMYRFRQEEATDEMVPAVLTPREREIVMYVGAGKTNREISEALIIAENTV 184 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 ++ + KL + V+L A+RH L Sbjct: 185 KNHLKNILEKLQLANRVQLAAYAVRHHLV 213 >UniRef50_A8LHM9 Two component transcriptional regulator, LuxR family n=1 Tax=Frankia sp. EAN1pec RepID=A8LHM9_FRASN Length = 215 Score = 256 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 62/213 (29%), Positives = 115/213 (53%), Gaps = 4/213 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI V++ DD LVR G++ ++E +++ GEA G+ A+ R DVVL+D+ MP + Sbjct: 1 MIRVVVADDQPLVRLGLKVLIETEDDLELTGEAEDGQAALALVRRTRPDVVLLDIRMPVL 60 Query: 61 GGLEATRKIAR--STADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSV 118 GL A R I + D +++M+T + + ++ GA+G++ K P +++ AIR V Sbjct: 61 DGLAALRAITADPALTDTRVVMVTTFELDEYVFEALRNGASGFVLKDTEPADLLRAIRVV 120 Query: 119 YSGQRYIASDIAQQMALSQIEPEKTESPFA--SLSERELQIMLMITKGQKVNEISEQLNL 176 +G+ ++ I +++ + + SL+ RE ++M ++ G +EI+ +L + Sbjct: 121 AAGESLLSPTITRRVIETFARRPAAPAAVDLTSLTVREREVMGLVGLGLSNDEIAARLVI 180 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 SP T ++ R+ KL+ +L LA + GL Sbjct: 181 SPATARTHVSRVMVKLSARDRAQLAVLANQAGL 213 >UniRef50_C5C8Q1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Micrococcus luteus NCTC 2665 RepID=C5C8Q1_MICLC Length = 227 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 67/220 (30%), Positives = 115/220 (52%), Gaps = 9/220 (4%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 + +L+ DD L+ +R ++ G+ VG + G +AV+ C DVVLMDM MP + Sbjct: 5 LRILIADDQPLMSGALRVLVGSAPGMTCVGVVANGVEAVEACAAIEPDVVLMDMQMPLMD 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EATR+I + ++++ +T T ++AGA GYL K A P ++ AI++V+ G Sbjct: 65 GVEATRRIKDTHPAIRVLAITTFTSEDYLVPALRAGAGGYLLKDAEPPAILGAIQAVHRG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTESPF---------ASLSERELQIMLMITKGQKVNEISE 172 + ++ +A ++ S T P + L+EREL ++ ++ +GQ EI+ Sbjct: 125 ESVLSPAVAAKLLASIERDRPTVGPTSVQPGSPDGSDLTERELGVLRLLARGQSNPEIAA 184 Query: 173 QLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 L +S TV + R+ +KL + V+L A + GL Sbjct: 185 NLFVSESTVKANLTRIMAKLEVRDRVQLIIRAAQLGLVTL 224 >UniRef50_C1TRD8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRD8_9BACT Length = 222 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 69/213 (32%), Positives = 116/213 (54%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+VDDH + R G+ L I+VVGEA G +A+++ + DV L+D++MP +G Sbjct: 5 IRVLVVDDHAIFRTGVINTLSLEDDIEVVGEAGDGLEALEFMKKVDFDVALVDVTMPRMG 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+E K+ + +I LT ++ + +AG G++ K + E++SAIR+V G Sbjct: 65 GVELVSKMEETGMARSVIALTALEDDRDMVFLSKAGVKGFVLKTSGFDELISAIRTVSGG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Y+ S A ++ E E + LSEREL+++ + +G EI+E+L+LS KTV Sbjct: 125 DNYVDSRAAGKLLNCFSEDTSRERGMSRLSERELEVLYWLAQGLNGQEIAERLSLSDKTV 184 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 ++ + +KL + + A R GL + + Sbjct: 185 KNHISHILAKLKVSDRTQAVAWAWRSGLASKDP 217 >UniRef50_D1V9H6 Two component transcriptional regulator, LuxR family n=2 Tax=Actinomycetales RepID=D1V9H6_9ACTO Length = 219 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 64/218 (29%), Positives = 110/218 (50%), Gaps = 4/218 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI V++VDD +VR G+ RI G VV E + G AV D+VLMD+ MP + Sbjct: 1 MIRVVIVDDQAIVRTGLARIFGAEDGFDVVAECADGAQAVATVTRLRPDLVLMDVRMPRL 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+EATR++ + ++ LT E+ + V++AGA G++ K + +++++A R V + Sbjct: 61 DGIEATRQLCAAPEPPPVLALTTFDEDEVLWGVIEAGAQGFVLKDSTAEDLLAAARVVAA 120 Query: 121 GQRYIASDIAQQMALSQI----EPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNL 176 G + +A +M + + + L+ RE ++ ++ +GQ EI++ L + Sbjct: 121 GGAWFDPAVAPRMMRAYRGAVASRRREAARLDLLTAREHDVLRLLARGQVNAEIAQALRV 180 Query: 177 SPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 SP TV S+ +F KL + A HG+ Sbjct: 181 SPGTVKSHIGAIFEKLGVRDRAAAIVFAFDHGIVRPGQ 218 >UniRef50_Q13QW9 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderia RepID=Q13QW9_BURXL Length = 220 Score = 256 bits (656), Expect = 4e-67, Method: Composition-based stats. Identities = 74/208 (35%), Positives = 119/208 (57%), Gaps = 2/208 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I+VLLVDDH +VR G RR+LE + V GEA+ A + DVV+MD+S+PG Sbjct: 6 ISVLLVDDHAVVREGYRRLLELNADVHVCGEAADAAQAYQRFCALRPDVVVMDVSLPGAS 65 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA R++ D ++++ +VH E + + AGA GY++K +AP +V A+R++ Sbjct: 66 GIEAMRRMLAREPDARVLIFSVHEEAIFVRRALDAGALGYVTKASAPDVLVEAVRTIARR 125 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Y++ DI+Q +AL E LS RE +++ ++ +G + I+E+L LS KTV Sbjct: 126 AGYLSPDISQALALRNAFSEGPPGR--QLSAREFEVLRLLVQGYTLPSIAEKLGLSQKTV 183 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 +++ + K V+L +A R GL Sbjct: 184 ANHQSVIRQKFGADNGVQLAQMASRLGL 211 >UniRef50_UPI0001C314AF two component transcriptional regulator, LuxR family n=2 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314AF Length = 228 Score = 256 bits (656), Expect = 4e-67, Method: Composition-based stats. Identities = 66/211 (31%), Positives = 113/211 (53%), Gaps = 4/211 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V++ DDH +VR+G+R +L+ I VV EA A + R + V+++D++MPG Sbjct: 14 IRVVIADDHRVVRSGLRMVLDAEPDIAVVAEAGDVPSAERAVRAHHPHVLVLDLNMPGEQ 73 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 L A ++ + +++LT+ + + +++GA GY+ K AA E+V A+R G Sbjct: 74 SLPAIPRLVAELPETAVVVLTMQQDPAFAREALRSGARGYVLKEAADDELVQAVRLAREG 133 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + Y+ ++ +MA P L+ REL+++ +I G EI++QL LS +TV Sbjct: 134 RTYLNPELGARMAAE----PPPSGPPDDLTARELEVLRLIALGHTNAEIAQQLFLSIRTV 189 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 S+R + K+ EL A+ HGL +A Sbjct: 190 ESHRAHIQQKVRRSSRAELVRYALDHGLMDA 220 >UniRef50_Q11YW8 Two component transcriptional regulator, LuxR family n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YW8_CYTH3 Length = 215 Score = 256 bits (655), Expect = 5e-67, Method: Composition-based stats. Identities = 62/211 (29%), Positives = 123/211 (58%), Gaps = 2/211 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I++++ DDH L+R GI+ +L+ + +VVGEA+ G++ +++ T ++V++D++MP Sbjct: 5 ISIIIADDHTLIRDGIKSLLQSVDEFEVVGEATDGDELIQFIDTLDPEIVVLDITMPKKS 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+E ++ + VK I+L++H K +Q+GA YL K +E++ A+++V +G Sbjct: 65 GIEVITEVKKYNNRVKFIVLSMHDNPEYVLKSVQSGALSYLLKNTDHEEIIKAVKAVSAG 124 Query: 122 QRYIASDIAQQMALSQIEPE--KTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPK 179 Q+Y + DI + PE K +L++REL+++ ++ G I+++L +S + Sbjct: 125 QKYFSPDIYSIILNGLANPELVKASQIAETLTKRELEVLKEVSMGLSTKLIADKLFISVR 184 Query: 180 TVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 TV ++R + KL++H EL A+ + Sbjct: 185 TVETHRINLMKKLDVHNSAELIKKAMDLNII 215 >UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N7Q7_9GAMM Length = 226 Score = 255 bits (654), Expect = 5e-67, Method: Composition-based stats. Identities = 74/217 (34%), Positives = 129/217 (59%), Gaps = 2/217 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I ++LVDDH +VR G R +L+ ++V+ EA G +A + D+V+MD+S+PG Sbjct: 5 ITIMLVDDHAIVREGYRSLLQKQDNLEVIAEACDGTEAYSQYKKYQPDIVVMDISLPGQS 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GL+A +I + A KI++ ++H + +AGA GY++K + P++++ AI V Sbjct: 65 GLKAIERIRQFDAKAKILVFSMHQNPSFALQATRAGALGYITKSSDPEDLIRAIAEVAKN 124 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 + +++DIAQ +A+ ++ E +S L+ RE +I+ ++ + +I+E LN+SPKTV Sbjct: 125 KHTLSADIAQALAMEKLGQE--QSALDELTVREFEILRLLVDAKSNQDIAELLNISPKTV 182 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLSSQ 218 ++ Y + KL + D+ELT LAI+ L N L + Sbjct: 183 SNSHYIIKKKLGVSSDIELTRLAIKMNLVNLLDLVDE 219 >UniRef50_B4D2I0 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2I0_9BACT Length = 209 Score = 255 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 8/212 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I ++L DDH +VR G+ L+ ++V EA G++A+ + + + DV L+D +P + Sbjct: 6 IRLMLADDHFMVRMGLATSLKLEPDFEIVAEADTGKEAISFYQHHRPDVALLDCRLPDMT 65 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+E T+ + + A +I++L+ + +QAGA YL K A E+V+AIR+V++G Sbjct: 66 GIEVTQALRAADATARILILSAFNGEEDVFRAVQAGAESYLLKNARRTEIVTAIRTVHAG 125 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Y +I+ +A L+ RE ++ I KG EI L ++ V Sbjct: 126 SPYFPPEISAILAARMRR--------EELTPREKSVLFEIVKGSSNKEIGCCLEITESAV 177 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCNAE 213 + + KLN +AI+ G+ + + Sbjct: 178 KIHVTHLLQKLNAKDRTHAATIAIQRGIVHLD 209 >UniRef50_C0GF31 Two component transcriptional regulator, LuxR family n=3 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GF31_9FIRM Length = 218 Score = 255 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 65/191 (34%), Positives = 110/191 (57%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 M+ V++VDDH +VR G++ ++E V+ EA GE+AV+ R DVV+MD+ MPG+ Sbjct: 1 MVRVMIVDDHAVVRVGLKSLIELHGDFSVIAEAGSGEEAVEVARETVPDVVVMDVRMPGM 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G++A R I + D K+IMLT + ++ + AGA+GY+ K +++ AI Sbjct: 61 SGIDACRAIVEAVPDTKVIMLTSYADDEAIYSAILAGASGYVLKQTDNAKLLEAIEQAAR 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 + + + ++ E A LSE E +I+++I +G++ EI+E+L L+ KT Sbjct: 121 NESLLDPHVTGKVLKRMKEIAAATQYEAKLSETEKKILVLIAEGKRNKEIAEELFLAEKT 180 Query: 181 VNSYRYRMFSK 191 V +Y ++FSK Sbjct: 181 VRNYVSKIFSK 191 >UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC-HTH domains) n=7 Tax=Bacteria RepID=B3DW63_METI4 Length = 243 Score = 255 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 69/205 (33%), Positives = 117/205 (57%), Gaps = 2/205 (0%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 VL+VDDH ++R G+ +++ G+ V G A + + DVVL+D+S+PG G Sbjct: 20 KVLIVDDHAILREGLIQLINSTPGLSVCGAAKNAHEGFELIEKTMPDVVLVDISLPGKSG 79 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 LE + I + D+ +++L++H E+ +V++AGA GYL K Q++++AI+ V +G Sbjct: 80 LELIKDIHAAYPDIALLVLSMHEESLYAERVLRAGARGYLMKNEGGQKLIAAIQKVLAGG 139 Query: 123 RYIASDIAQQMALSQIEPEKTE--SPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 ++ +A ++ K SP +LS+RE ++ +I KG +I+EQL+LS KT Sbjct: 140 ISVSERVANRILQGVSGKRKALSISPIEALSDREFEVFQLIGKGYGSRQIAEQLSLSVKT 199 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAI 205 V +YR + KL + +L H AI Sbjct: 200 VEAYRASIKQKLYLKSGPQLVHYAI 224 >UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y1Z3_LEPCP Length = 235 Score = 255 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 127/211 (60%), Gaps = 1/211 (0%) Query: 4 VLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGL 63 +L+VDDH +VR G++RILE VV EAS G A++ R +D+ ++D+SMPG+ GL Sbjct: 15 ILIVDDHVIVREGLQRILEATGAGWVVAEASSGFQALEVMRHQPIDLAIVDLSMPGMNGL 74 Query: 64 EATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQR 123 + ++I V++++L++H E + +AGA GY++K A E+V+A+R V +G Sbjct: 75 DLIKRIRTEFPRVRVLVLSMHAEEQYAMRAFKAGANGYVTKDGASAELVNAVRKVATGGA 134 Query: 124 YIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVNS 183 Y+ + +A+++ L T A LS+REL+++ I G+++ +I+E L+LS KTV++ Sbjct: 135 YVTASLAERVVLQL-NGATTAPGHAQLSDRELEVLRRIVAGERITDIAEALHLSVKTVST 193 Query: 184 YRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 ++ R+ KL + L + HGL + Sbjct: 194 HKSRIQEKLQLPTMAALIRYGMAHGLAQRDD 224 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 255 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 69/208 (33%), Positives = 112/208 (53%), Gaps = 6/208 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I VL+ DDH +VR G++ L+ + VV EA G++A+ + DVVL+D++MPG Sbjct: 5 IRVLVADDHPIVRQGLKTFLDIQPDLSVVAEARDGDEALALIAAHEPDVVLLDLNMPGSD 64 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G + ++A S K+I+LT TE + + AGAAG+L K P + AIRSV G Sbjct: 65 GAKVLTRLAASDHRAKVIVLTSVTEAVRVTEAVAAGAAGFLYKDIDPDSLAQAIRSVADG 124 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Q A + M P A+L+ RE +++ ++ G+ EI++QL+++ KTV Sbjct: 125 QVIFAREAVTAM------TAPAPGPVAALTAREREVLALVAAGRSNREIAKQLSVAEKTV 178 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 ++ +F KL + + A+ HG+ Sbjct: 179 KTHLSSLFRKLGVADRTQAALYAVTHGM 206 >UniRef50_A2SLK8 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiales RepID=A2SLK8_METPP Length = 226 Score = 255 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 76/225 (33%), Positives = 120/225 (53%), Gaps = 14/225 (6%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRT-----NAVDVVLMDM 55 MI V++ DDH +VR GI++IL D I + GEA G DA+ R DVVL+D+ Sbjct: 1 MIRVVICDDHVIVRQGIKQILADAGDIALAGEAGNGPDAMTLVRAGAAAGTPPDVVLLDI 60 Query: 56 SMPGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAI 115 +MP GL+ + + + ++ML+ + + + ++ GAAGYL+K A ++++ AI Sbjct: 61 AMPQRDGLDVLKSLKAEFPRLPVLMLSTYPDRQYAVRSLKLGAAGYLNKSADSEQMIDAI 120 Query: 116 RSVYSGQRYIASDIAQQMALSQIE---------PEKTESPFASLSERELQIMLMITKGQK 166 R V G+ +I +A+Q+A + + LS RE Q+ ++ G+ Sbjct: 121 RRVAQGKLFITPSVAEQLAGAVGAGIGSRKGGVGDDEAPLHERLSHREYQVFGLLAAGKS 180 Query: 167 VNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V EI+EQL LS TV++YR R+ K + DVEL A+R L Sbjct: 181 VGEIAEQLVLSSNTVSTYRARILEKTGVRNDVELALYAVRQELMQ 225 >UniRef50_Q027R2 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q027R2_SOLUE Length = 247 Score = 255 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 55/221 (24%), Positives = 115/221 (52%), Gaps = 13/221 (5%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +++ DDH + R G+ R+L + +VV +A G + + + D++L+D+ MPG+ Sbjct: 23 IRIVVADDHPIFRDGLCRLLALEEDFEVVAQAQDGRQVLDVLQQHEPDILLLDLKMPGLD 82 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GL +++ + ++I+LT + + M+ G +G + K A + ++ +IR V++G Sbjct: 83 GLATLQRLQIAKNKTRVIVLTASDDKNEFVQAMKLGTSGIVLKQTATELLIKSIRKVHAG 142 Query: 122 QRYIASDIAQQMALSQI-------------EPEKTESPFASLSERELQIMLMITKGQKVN 168 + ++ S + + P E + LS+RE +I+ ++ +G K Sbjct: 143 EIWLDSHTTAAVIRQFVANDETPAMAAPSQAPPTRERERSPLSQREREIVALVAQGFKNK 202 Query: 169 EISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGL 209 E++E++ +S +TV ++ + +F KL + +EL AI + L Sbjct: 203 EMAEKMFISEQTVKNHLHNIFDKLGVSDRLELALYAIHNNL 243 >UniRef50_C6WV69 Two component transcriptional regulator, LuxR family n=2 Tax=Betaproteobacteria RepID=C6WV69_METML Length = 216 Score = 255 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 133/210 (63%), Gaps = 1/210 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V++ DDH ++RAG+++IL + + I V+ EA +A+K DV+L+D+S+P Sbjct: 8 IKVIIADDHAILRAGLKQILSETEDILVIAEAQNANEAIKLGSQPEADVLLLDISLPDRS 67 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+EA + I R + + ++ML++H E+ + +++GAAGYL K +A E+V+AI++V G Sbjct: 68 GMEALKYIKRENSHIAVLMLSMHREDEYAIRALKSGAAGYLCKQSASSELVNAIQTVARG 127 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 ++YI ++A+ +A + ++P LS+RE Q +MI G V +++ +L+LS KTV Sbjct: 128 KKYITPEVAEILANQI-GRDDQKAPHELLSDREYQTFIMIASGLSVTDVANKLSLSVKTV 186 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 + YR R+ K+ + + ELTH A +H L + Sbjct: 187 SMYRARLLEKMQLKHNAELTHYAFKHNLVS 216 >UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microscilla marina ATCC 23134 RepID=A1ZEE6_9SPHI Length = 213 Score = 255 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 62/213 (29%), Positives = 111/213 (52%), Gaps = 3/213 (1%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVK-WCRTNAVDVVLMDMSMPG 59 MI +V+DH +VR G++++L +KV+ E + + + D+VL D+++PG Sbjct: 1 MITFYIVEDHTIVRQGLKQLLAKYAEMKVLAEFGVPDQIMDNLAKGERPDIVLCDINLPG 60 Query: 60 IGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVY 119 + GL T KI + D KII+LT+H + K AGA GY K E++ I+ +Y Sbjct: 61 MDGLALTEKIKQKYPDQKIIILTMHQKEFYVLKAFDAGADGYFHKDTEESELIMGIKKIY 120 Query: 120 SGQRYIASDIAQQMALSQIEP--EKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 +GQ+Y ++Q + ++ ++ +L+ RE +++ + G EI ++L +S Sbjct: 121 NGQKYFCQSVSQILINRLLDTKNSSGKTLLPTLTFREKEVLEQVVAGLGNREIGDKLCIS 180 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 +TV ++R + K + VEL AI + L Sbjct: 181 TRTVENHRANILRKFGLKNTVELVKFAIENSLV 213 >UniRef50_A9U6E4 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U6E4_PHYPA Length = 563 Score = 255 bits (653), Expect = 8e-67, Method: Composition-based stats. Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 7/206 (3%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +L+VDDH ++R +R +LE+ + +VVG A GE A++ CR +VLMD+ MP + Sbjct: 358 IRLLVVDDHPVIRESLRTLLEEQQDFQVVGTAEDGEQAIELCRQLRPQLVLMDVDMPIVD 417 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ A+R I S ++I++LT + + +++G GYL K P E+ IR+V+ G Sbjct: 418 GISASRTIKESWPHIRILILTTFEDTKQALEALRSGVDGYLLKSMQPLELAETIRTVHRG 477 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFA-------SLSERELQIMLMITKGQKVNEISEQL 174 I ++ ++ + P + L+ REL+I+ ++KG + I+ Sbjct: 478 GTLIEQGMSHKLFAQLEADNSGDDPSSIKASSAYDLTPRELEILQFVSKGLRYKSIASNF 537 Query: 175 NLSPKTVNSYRYRMFSKLNIHGDVEL 200 LS TV +Y + KL + E Sbjct: 538 YLSDGTVRNYASSAYLKLGVRNREEA 563 >UniRef50_C2RNB5 Two-component protein Kinase n=1 Tax=Bacillus cereus BDRD-ST24 RepID=C2RNB5_BACCE Length = 304 Score = 255 bits (653), Expect = 8e-67, Method: Composition-based stats. Identities = 64/214 (29%), Positives = 113/214 (52%), Gaps = 4/214 (1%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I + +VDDH +R + IL ++ ++VVG A GE A++ C DVVLMD+ MP + Sbjct: 91 IRLCIVDDHSFIRESLHTILSGLEDLQVVGMAEDGEQALELCGRLKPDVVLMDLEMPNLD 150 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ AT+ I + ++++++L+ ++++ GA GY+ K +E+ +IR VY G Sbjct: 151 GIHATKMIKKRWPEIRVLILSTFQNTERAKEIIRNGADGYVLKSIDSRELAESIRLVYRG 210 Query: 122 QRYIASDIAQQMALSQIE----PEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 I D+ +M E +++ LS+REL+I+ ++++G + I+ L LS Sbjct: 211 GAMITHDLFHRMWEENKETGLFESRSDGIEYGLSKRELEILELLSQGSRYKTIASTLYLS 270 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 TV +Y ++ KL + E A GL + Sbjct: 271 NGTVRNYASNLYEKLGVKNREEAVQKAKDIGLLS 304 >UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XAQ5_9BACT Length = 229 Score = 255 bits (653), Expect = 9e-67, Method: Composition-based stats. Identities = 58/216 (26%), Positives = 118/216 (54%), Gaps = 4/216 (1%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 +LLVDDH ++R G+R+I+ + + V GEA A++ ++ D+VL D+++P G Sbjct: 14 KILLVDDHPMMREGLRQIIGNEIDLAVCGEAENAFQALELVKSEKPDLVLADITLPDKNG 73 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 LE + + + ++++++H E +V++AG GY+ K ++++ AIR V SGQ Sbjct: 74 LELLKDLQAQHPKLPVLVISMHDEALYAERVLRAGGRGYIMKHEGGKKIMQAIRHVLSGQ 133 Query: 123 RYIASDIAQQMALSQI--EPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 +++ ++ ++ + SP +L++RE ++ +I +G EI+ +++S KT Sbjct: 134 IFVSEKMSARILELFSGHGTQAASSPIENLTDREFEVFRLIGEGLSTKEIAANMHVSAKT 193 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLS 216 V +R + +KL + EL +R +++ S Sbjct: 194 VEVHRMNIKTKLGLKTAAELIRYTVR--WVESQSTS 227 >UniRef50_UPI000050F8A6 two component transcriptional regulator, LuxR family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F8A6 Length = 222 Score = 255 bits (652), Expect = 9e-67, Method: Composition-based stats. Identities = 58/215 (26%), Positives = 111/215 (51%), Gaps = 13/215 (6%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I V++ DD L+R+G+R +L I ++ EA+ G +A++ R + D++LMD+ MP + Sbjct: 3 IRVIIADDESLMRSGLRLLLGAADDIDIIAEAANGAEAIELARELSPDLILMDIRMPVMD 62 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLEATR + T ++++LT + + +++GAAGY+ K P++++ A+R+ +G Sbjct: 63 GLEATRALMAQTLHPEVLILTAFGTDEFVLQALRSGAAGYILKDTPPEDLIHAVRAAANG 122 Query: 122 QRYIASDIAQQMALSQIEPEK-------------TESPFASLSERELQIMLMITKGQKVN 168 R ++ + + P L+ RE +I + +G Sbjct: 123 TRTLSPSAVESLLGRDTTSATGVAGASNWNSVPIGPDPLEPLTTREREIAEAVAQGMTNA 182 Query: 169 EISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHL 203 +++ L +S TV ++ R+F KL++ V+L L Sbjct: 183 QVARALFVSTATVKTHLARIFYKLDVSTRVQLALL 217 >UniRef50_Q5NZZ3 Two-component system response regulator n=3 Tax=Betaproteobacteria RepID=Q5NZZ3_AZOSE Length = 210 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 125/211 (59%), Gaps = 1/211 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +L+VDDH + R+G+RR+L D + V EAS G A+ R+ DV+LMD++M G Sbjct: 1 MIELLIVDDHTIFRSGLRRMLSDEADMHVADEASDGASALAKIRSGKFDVILMDINMAGR 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 GL+ + ++ +IML+++ E ++A A YLSK PQE+++AIR V Sbjct: 61 SGLDTLESLRAERPELPVIMLSMYPEEQYAVLALRARANAYLSKDVEPQELLAAIRHVVG 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G RY++ A + + + + +P L+ RE+Q+M+ I +G + ++ Q+ LS KT Sbjct: 121 GGRYVSPRSAANLLMQM-DRAREGAPHEKLTAREMQVMMKIVRGMSLTDVGVQMCLSVKT 179 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 V++YR R+ KL++ + EL A+R+GL + Sbjct: 180 VSTYRMRILEKLSLSSNAELVQYAMRNGLLD 210 >UniRef50_C5UZV9 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZV9_9PROT Length = 213 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 78/214 (36%), Positives = 133/214 (62%), Gaps = 1/214 (0%) Query: 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60 MI +L+VDDH L+R G++++LED +K+ GEAS G +A+ R D++L+D+++P Sbjct: 1 MIQILVVDDHALIRKGLKQLLEDTPDLKITGEASSGTEAISMLRAAPFDLMLLDINLPDK 60 Query: 61 GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120 G+E ++ +KII+L+++ E+ + ++AGA GY++K +A ++ AIR V S Sbjct: 61 HGIEVLKQFKSEQPQLKIIILSMYPEDQYGVRALKAGAMGYINKQSASDVLIKAIRHVLS 120 Query: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180 G++YI+ +A+Q+ + I E E +LS RE Q + ++ G+ ++EIS+ + LSPKT Sbjct: 121 GKKYISEILAEQLLNNLI-GESQELMHQNLSNREYQTLCLMASGKTLSEISQIMALSPKT 179 Query: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAET 214 V+ YR RM +K+ + E H AI H L + Sbjct: 180 VSVYRSRMLAKMTFTNNAEAIHYAITHRLVELQD 213 >UniRef50_A0NNP3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NNP3_9RHOB Length = 205 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 118/207 (57%), Gaps = 2/207 (0%) Query: 5 LLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGLE 64 +L DDHELVR GIR L+ + ++VVGEA+ G +A+ DV+LMD+SMP + GLE Sbjct: 1 MLADDHELVRDGIRARLQKVADLEVVGEATNGREALTLAHDLRPDVLLMDVSMPVMNGLE 60 Query: 65 ATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQRY 124 A ++ + ++ +++L+V+ V+QAGA GY+ K + E+++AI SV SG Y Sbjct: 61 AATQMRKLLPEIAVLILSVYDNPEYVRGVVQAGARGYILKDISAAEMITAITSVASGGYY 120 Query: 125 IASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVNSY 184 +S + + + + L++RE Q++ I +GQ E++++L +S +TV S+ Sbjct: 121 FSSAVGPTLVGAGTSAPVEDP--YGLTDRERQVLTAIARGQPNKEVAKELGISVRTVESH 178 Query: 185 RYRMFSKLNIHGDVELTHLAIRHGLCN 211 R + K+ +L +A GL + Sbjct: 179 RLNLREKVGNKNAAQLYKVAQDLGLLD 205 >UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=Mesorhizobium loti RepID=Q98DH9_RHILO Length = 215 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 69/208 (33%), Positives = 123/208 (59%), Gaps = 1/208 (0%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +++ DDH +VR+GIR +LE V GEA GE AV+ R +A +V++D S+P + Sbjct: 6 IKIVIADDHPIVRSGIRAVLEQRAEWWVCGEADNGETAVRLAREHAAKIVILDYSLPVLN 65 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 GLEATR I R+ + ++++ T+H + L + ++AGA GYL K E+V+A+ ++ G Sbjct: 66 GLEATRIIRRTMPETEVLIYTMHEDESLIRETLRAGARGYLLKIEDDSELVAAVAALIRG 125 Query: 122 QRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTV 181 Q Y + +++ + ++ + + L+ RE +++ +++G+ I+ +L +S KTV Sbjct: 126 QTYFSPRVSECVLQDFLDGQSDVTSRN-LTNREREVVRFVSEGESNKRIAARLGVSVKTV 184 Query: 182 NSYRYRMFSKLNIHGDVELTHLAIRHGL 209 +S+R KL + V+L AIR+ L Sbjct: 185 DSHRTTAMRKLGLRNAVDLVRYAIRNKL 212 >UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FM25_SORC5 Length = 233 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 69/210 (32%), Positives = 118/210 (56%), Gaps = 1/210 (0%) Query: 4 VLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGL 63 + L+DDH +VR G R L D + VVG+A DA++ + DVVL+D+++P G+ Sbjct: 24 IYLIDDHPVVREGFARALSDEPDMVVVGQAGTAADALRETASCKPDVVLVDLNIPDRDGI 83 Query: 64 EATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQR 123 E + K+++L+ + + A+ ++AGA GYL K + +EV+ IR + +G Sbjct: 84 ELLGALRAQLPQAKLLVLSGYDDEFRVAEALRAGAQGYLVKTSKLEEVIEGIRRIATGGA 143 Query: 124 YIASDIAQQMALSQIEPEKTES-PFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVN 182 ++S IA + + +P S +L+ RE Q++ ++ G E + +L +SPKTV Sbjct: 144 PLSSSIAGAVVRAMRKPASEGSGGLDALTPRERQVLRLLAAGVSTRETAARLTISPKTVE 203 Query: 183 SYRYRMFSKLNIHGDVELTHLAIRHGLCNA 212 ++R R+++KL VELT +A+R GL A Sbjct: 204 THRVRIYAKLGCKSAVELTRIAVRTGLIEA 233 >UniRef50_C4XMF2 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMF2_DESMR Length = 218 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 61/214 (28%), Positives = 117/214 (54%), Gaps = 5/214 (2%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 +L+VDDH L R G++ IL V GEA +A++ + D+ ++D+S+P G Sbjct: 5 RLLIVDDHPLFREGLKAILRRDPSYAVAGEAGSYAEALRTAKDCRPDLAVLDISLPDRSG 64 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 ++ R++ + + I+M+++H + A+ ++ GA GYL+K AA ++S +R+V +GQ Sbjct: 65 IQLARELRQMLPSLGILMVSMHAKVDYVAEALKVGALGYLTKDAATDNLLSGLRAVAAGQ 124 Query: 123 RYIASDIA-----QQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 ++ ++ +A + E++ S + SL+ RE ++M ++ +G E++ L +S Sbjct: 125 PWLDPTLSVEISRSLLAKTPRAEEESHSAYDSLTPREREVMRLVVEGLSNKEVAAALEIS 184 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 KT +R + KL + VEL A + GL + Sbjct: 185 VKTAEHHRGSLMRKLGMQNSVELVRYATKLGLID 218 >UniRef50_B4B0U5 Two component transcriptional regulator, LuxR family n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B0U5_9CHRO Length = 224 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 67/215 (31%), Positives = 112/215 (52%), Gaps = 6/215 (2%) Query: 2 INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIG 61 I +LLVDDH L+R G++ + +V+GEA+ G A++ D++LMD+ +P + Sbjct: 10 IRILLVDDHNLMRRGLKGLFALNPDYEVIGEATDGLQAIELQEQLKPDIILMDIDLPLLD 69 Query: 62 GLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSG 121 G+ AT++I R KI+ L+ + + ++ +GA GY K +E++ IR + G Sbjct: 70 GISATQRIKRDDTATKILALSAYDHDTQVLGMLASGADGYCLKNIEWEELLVIIRLISHG 129 Query: 122 QRYIASDIAQQMALSQIEPE------KTESPFASLSERELQIMLMITKGQKVNEISEQLN 175 Y+ IA +++ T LSERE I+ +I +G +I+EQL Sbjct: 130 GVYLDPRIAHKVSHLLKSGSFAVETNTTPKAVTVLSERERLILKLIAEGFSNKKIAEQLF 189 Query: 176 LSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLC 210 LSP T+ SY + +KL++ V+ A+R GL Sbjct: 190 LSPGTIKSYVRMLLNKLSVDDRVQAAAKAVREGLI 224 >UniRef50_B1L0K3 DNA-binding response regulator, LuxR family n=22 Tax=Bacteria RepID=B1L0K3_CLOBM Length = 217 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 62/213 (29%), Positives = 112/213 (52%), Gaps = 4/213 (1%) Query: 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG 62 N+++VDD +L+R G++ IL I+VVG A G +A+ C+ V VVLMD+ MP G Sbjct: 5 NIIVVDDEKLIREGLKIILSTYNDIEVVGLAGDGREALSLCKEKDVQVVLMDIRMPNCDG 64 Query: 63 LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQ 122 + TR I +KI++LT + + ++ GA+GYL K ++ + + I++ G Sbjct: 65 VLGTRIIKEQFPHIKILILTTFNDKEYIHEALKFGASGYLLKDSSNELIYEGIKACVKGN 124 Query: 123 RYIASDIAQQMALSQIEPEKTES----PFASLSERELQIMLMITKGQKVNEISEQLNLSP 178 + D+A + L+ ++ +L+ERE+ I+ I G EI+E++ LS Sbjct: 125 VVVHPDVANNIILNTTYEKELNDDDINLKYNLTEREINIIRQIANGLSNKEIAEKIYLSE 184 Query: 179 KTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 T+ + + SKL++ ++ A ++ + N Sbjct: 185 GTIKNNISTILSKLDLRDRTQIAIFAFKNNIVN 217 >UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphylococcaceae RepID=B9E7V9_MACCJ Length = 210 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 57/214 (26%), Positives = 114/214 (53%), Gaps = 7/214 (3%) Query: 1 MIN--VLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNA-VDVVLMDMSM 57 M ++LVDDH +VR G++ +L V+ + + G + ++ D+++MD+ M Sbjct: 1 MKRMDIILVDDHHIVRQGMKFLLSTEASFNVIADFNNGRELLEHLDETQLPDLIIMDLVM 60 Query: 58 PGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRS 117 P + G+EATR+I DVK+++L+ + VM AGA GY K + P+ +++ I+ Sbjct: 61 PELNGIEATRRIKAKYPDVKVLVLSSFIDEEHVLGVMDAGADGYEMKDSEPKALINTIKQ 120 Query: 118 VYSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLS 177 + +G++ D+ + + LS+REL+++ +++G EI+E+L +S Sbjct: 121 IAAGEQIFHPDVMKV----RKSGMNLAHLRNPLSKRELEVLKAMSEGLTNKEIAEKLFVS 176 Query: 178 PKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCN 211 KTV ++ +F+KL + + + +++ L Sbjct: 177 EKTVKTHVSHIFAKLEVGDRTQASMYGVKYKLIE 210 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.216 0.770 Lambda K H 0.267 0.0662 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,350,868,165 Number of Sequences: 3077464 Number of extensions: 179844907 Number of successful extensions: 552579 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 38973 Number of HSP's successfully gapped in prelim test: 13801 Number of HSP's that attempted gapping in prelim test: 452606 Number of HSP's gapped (non-prelim): 61453 length of query: 218 length of database: 1,040,396,356 effective HSP length: 124 effective length of query: 94 effective length of database: 658,790,820 effective search space: 61926337080 effective search space used: 61926337080 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.8 bits) S2: 92 (39.4 bits)