 |
| Job Description | P76102 | | Confidence | 69.76% | Date | Thu Jan 5 12:18:56 GMT 2012 |
| Rank | 88 | Aligned Residues | 41 |
| % Identity | 17% | Template | d1l1oc_ |
| SCOP info | OB-fold
| Nucleic acid-binding proteins
| Single strand DNA-binding domain, SSB
|
| Resolution | 2.80 |
|
|   |   |
301 | . | . | . | . | . | . | . | . | 310 | . | |
. | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . |
| Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
Q | V | L | A | V | P | P | A | Y | T | S | . |
Q | R | C | A | Y | C | G | H | T | A | K | E | N | R | L | S | Q | S | K | F | R | C | Q | V | C | G | Y | T | A | N |
| Query Conservation |   |
  |
|   |   |
|   |
|   |
|
|
| . |
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|   |   |
|   |   |   |   |   |   |
|   |
|
|
|   |   |   |
|   |
|
|
|   |   |   |   |   |
|   |
|   |
|   |
|
|   |   |   |   |   |
| Template Sequence |   |
T | V | V | Y | L | R | K | E | N | C | M | Y | Q | A | C | P | T | Q | D | C | N | K | K | V | I | D | Q | Q | N | G | L | Y | R | C | E | K | C | D | T | E | F | P |
| Template Known Secondary structure |   |
 |  |  |  |  |
|
| S | T | T |  |  |  | B |
|
| S | T | T |
|
|
| B |
|  |  |  | T | T | T |  |  |  |  | T | T | T | T |  |  |  | S |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
467 | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|