Phyre 2 alignment of P75818 with c3dt5A_

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Job Description | P75818
Confidence | 3.33% | Date | Thu Jan 5 12:14:31 GMT 2012
Rank | 86 | Aligned Residues | 41
% Identity | 24% | Template | c3dt5A_
PDB info | PDB header:structural genomics, unknown function | Chain: A: PDB Molecule:uncharacterized protein af_0924; | PDBTitle: c_terminal domain of protein of unknown function af_0924 from2 archaeoglobus fulgidus.
Resolution | 1.94 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 93 | . | . | . |  | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |  |  |  |  |  | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 |  |  |  |  | . | . | .
Predicted Secondary structure |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |
Query SS confidence |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |
Query Sequence |  | F | S | S | R | . | T | T | L | P | D | S | A | H | V | A | S | A | S | T | . | . | . | . | . | I | P | N | R | D | A | R | N | I | P | L | R | V | D | L | K | Q | G | D | Q | . | . | . | . | G | W | Q
Query Conservation |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |
Alig confidence |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | F | S | S | Y | V | Y | T | A | Q | T | E | D | E | I | E | T | I | I | T | C | R | R | Y | L | A | G | N | N | L | L | R | V | L | P | X | H | F | K | F | K | A | D | K | I | A | G | S | A | N | W | T
Template Known Secondary structure |  |  |  | S | S |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  | T | T | G | G | G | S |  |  |  |  |  |  |  |  |  | S |  |  | G | G | G |  |  |  |  | T | T |  | S | S |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 96 | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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