BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= batch____
         (171 letters)

Database: uniref50.fasta 
           3,077,464 sequences; 1,040,396,356 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P75818 Uncharacterized lipoprotein ybjP n=94 Tax=Entero...   355   3e-97
UniRef50_A4W8N2 Lipoprotein n=14 Tax=Enterobacteriaceae RepID=A4...   291   4e-78
UniRef50_A4TN56 Lipoprotein n=36 Tax=Enterobacteriaceae RepID=A4...   120   2e-26
UniRef50_A7HVC0 Putative uncharacterized protein n=1 Tax=Parviba...    43   0.004

>UniRef50_P75818 Uncharacterized lipoprotein ybjP n=94 Tax=Enterobacteriaceae
           RepID=YBJP_ECOLI
          Length = 171

 Score =  355 bits (911), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 171/171 (100%), Positives = 171/171 (100%)

Query: 1   MRYSKLTMLIPCALLLSACTTVTPAYKDNGTRSGPCVEGGPDNVAQQFYDYRILHRSNDI 60
           MRYSKLTMLIPCALLLSACTTVTPAYKDNGTRSGPCVEGGPDNVAQQFYDYRILHRSNDI
Sbjct: 1   MRYSKLTMLIPCALLLSACTTVTPAYKDNGTRSGPCVEGGPDNVAQQFYDYRILHRSNDI 60

Query: 61  TALRPYLSDKLATLLSDASRDNNHRELLTNDPFSSRTTLPDSAHVASASTIPNRDARNIP 120
           TALRPYLSDKLATLLSDASRDNNHRELLTNDPFSSRTTLPDSAHVASASTIPNRDARNIP
Sbjct: 61  TALRPYLSDKLATLLSDASRDNNHRELLTNDPFSSRTTLPDSAHVASASTIPNRDARNIP 120

Query: 121 LRVDLKQGDQGWQDEVLMIQEGQCWVIDDVRYLGGSVHATAGTLRQSIENR 171
           LRVDLKQGDQGWQDEVLMIQEGQCWVIDDVRYLGGSVHATAGTLRQSIENR
Sbjct: 121 LRVDLKQGDQGWQDEVLMIQEGQCWVIDDVRYLGGSVHATAGTLRQSIENR 171


>UniRef50_A4W8N2 Lipoprotein n=14 Tax=Enterobacteriaceae RepID=A4W8N2_ENT38
          Length = 172

 Score =  291 bits (746), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 142/172 (82%), Positives = 152/172 (88%), Gaps = 1/172 (0%)

Query: 1   MRYSKLTMLIPCALLLSACTT-VTPAYKDNGTRSGPCVEGGPDNVAQQFYDYRILHRSND 59
           MRYS LT+L+PCALLLSACTT VTPA+KD GTRSGPC++GGPD VAQQFYDYRI HR+ND
Sbjct: 1   MRYSALTLLVPCALLLSACTTPVTPAFKDIGTRSGPCIDGGPDVVAQQFYDYRIQHRNND 60

Query: 60  ITALRPYLSDKLATLLSDASRDNNHRELLTNDPFSSRTTLPDSAHVASASTIPNRDARNI 119
           ITALRPYLSD LA LLSDA+RD  H  LL +DPFSSRTT PDSA VASASTIPN DARNI
Sbjct: 61  ITALRPYLSDNLAKLLSDATRDPQHNALLQSDPFSSRTTPPDSAKVASASTIPNTDARNI 120

Query: 120 PLRVDLKQGDQGWQDEVLMIQEGQCWVIDDVRYLGGSVHATAGTLRQSIENR 171
           PLRV L QGDQ WQDEVLMI+EGQCW IDDVRY+GGSVHA AGTLRQSIENR
Sbjct: 121 PLRVKLTQGDQSWQDEVLMIREGQCWAIDDVRYIGGSVHAPAGTLRQSIENR 172


>UniRef50_A4TN56 Lipoprotein n=36 Tax=Enterobacteriaceae RepID=A4TN56_YERPP
          Length = 191

 Score =  120 bits (300), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/170 (46%), Positives = 101/170 (59%), Gaps = 23/170 (13%)

Query: 22  VTPAYKDNGTRSGPCVEGGPDNVAQQFYDYRI--------LHRSNDITALRPYLSDKLAT 73
           V P ++   +RS PC+EGGPD VAQ+FYD RI        L   N     RPYLS  L  
Sbjct: 23  VNPVFEATSSRSSPCIEGGPDTVAQKFYDLRIQQIGGQQGLPDDNLSAQFRPYLSQSLYN 82

Query: 74  LLSDASRDNNHR--------ELLTNDPFSSRTTLPDSAHVASASTIPNRDARNIPLRVDL 125
            +  A +  ++R        ++++ D F+S      SA VASASTIPN DARNIPLRV+L
Sbjct: 83  DIQAARKQASNRTPAQVNKTQMISGDIFTSLREGSTSASVASASTIPNTDARNIPLRVNL 142

Query: 126 K-QGDQG----WQDEVLMIQEGQCWVIDDVRYLGGSVHATAGTLRQSIEN 170
             Q   G    WQDEVLMI+EG CWV+DD+R++G  V A A +LRQ + N
Sbjct: 143 SHQMADGKAVMWQDEVLMIREGTCWVVDDIRFMG--VSAPASSLRQLLGN 190


>UniRef50_A7HVC0 Putative uncharacterized protein n=1 Tax=Parvibaculum
           lavamentivorans DS-1 RepID=A7HVC0_PARL1
          Length = 181

 Score = 43.1 bits (100), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 73/186 (39%), Gaps = 31/186 (16%)

Query: 1   MRYSKLTMLIPCALLLSACTTVTPAYKDNGTRSGPCVEGGPDNVAQQFYDYRILHRSNDI 60
           MR  +  +L     +L+AC    P             E      A  FYD  +  RS+ +
Sbjct: 1   MRTLRPLLLFALGFMLAACGEAKP-------------EADALRAAAVFYDIVLSARSSGV 47

Query: 61  ------TALRPYLSDKLATLLSDASR-DNNHRELLTND--PFSSRTTLPDSAHVASASTI 111
                   LRP +S  L +LLS A+  +  H E + N   P+            A+A  I
Sbjct: 48  PDADMRARLRPVISSDLDSLLSQAAEAERRHTERVNNSEPPYLQGDIFSSLFEGATAYEI 107

Query: 112 PNRDARNIPLRVDLKQGDQG-----WQDEVLMIQEG----QCWVIDDVRYLGGSVHATAG 162
              D     ++ +     +      W D ++++  G    + W++DD+ Y G    A+ G
Sbjct: 108 GTCDGDERRMQCEAMLAHEAEEPVQWTDRLVLVANGGPEDRRWLVDDILYGGDWDFASKG 167

Query: 163 TLRQSI 168
           TL+ S+
Sbjct: 168 TLKSSL 173


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_P75818 Uncharacterized lipoprotein ybjP n=94 Tax=Entero...   314   8e-85
UniRef50_A4W8N2 Lipoprotein n=14 Tax=Enterobacteriaceae RepID=A4...   303   1e-81
UniRef50_A4TN56 Lipoprotein n=36 Tax=Enterobacteriaceae RepID=A4...   205   5e-52

Sequences not found previously or not previously below threshold:

UniRef50_A7HVC0 Putative uncharacterized protein n=1 Tax=Parviba...    55   8e-07
UniRef50_B7LL23 Putative uncharacterized protein n=5 Tax=Escheri...    47   3e-04
UniRef50_Q1H0J5 Putative uncharacterized protein n=1 Tax=Methylo...    45   0.001

>UniRef50_P75818 Uncharacterized lipoprotein ybjP n=94 Tax=Enterobacteriaceae
           RepID=YBJP_ECOLI
          Length = 171

 Score =  314 bits (804), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 171/171 (100%), Positives = 171/171 (100%)

Query: 1   MRYSKLTMLIPCALLLSACTTVTPAYKDNGTRSGPCVEGGPDNVAQQFYDYRILHRSNDI 60
           MRYSKLTMLIPCALLLSACTTVTPAYKDNGTRSGPCVEGGPDNVAQQFYDYRILHRSNDI
Sbjct: 1   MRYSKLTMLIPCALLLSACTTVTPAYKDNGTRSGPCVEGGPDNVAQQFYDYRILHRSNDI 60

Query: 61  TALRPYLSDKLATLLSDASRDNNHRELLTNDPFSSRTTLPDSAHVASASTIPNRDARNIP 120
           TALRPYLSDKLATLLSDASRDNNHRELLTNDPFSSRTTLPDSAHVASASTIPNRDARNIP
Sbjct: 61  TALRPYLSDKLATLLSDASRDNNHRELLTNDPFSSRTTLPDSAHVASASTIPNRDARNIP 120

Query: 121 LRVDLKQGDQGWQDEVLMIQEGQCWVIDDVRYLGGSVHATAGTLRQSIENR 171
           LRVDLKQGDQGWQDEVLMIQEGQCWVIDDVRYLGGSVHATAGTLRQSIENR
Sbjct: 121 LRVDLKQGDQGWQDEVLMIQEGQCWVIDDVRYLGGSVHATAGTLRQSIENR 171


>UniRef50_A4W8N2 Lipoprotein n=14 Tax=Enterobacteriaceae RepID=A4W8N2_ENT38
          Length = 172

 Score =  303 bits (777), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 142/172 (82%), Positives = 152/172 (88%), Gaps = 1/172 (0%)

Query: 1   MRYSKLTMLIPCALLLSACTT-VTPAYKDNGTRSGPCVEGGPDNVAQQFYDYRILHRSND 59
           MRYS LT+L+PCALLLSACTT VTPA+KD GTRSGPC++GGPD VAQQFYDYRI HR+ND
Sbjct: 1   MRYSALTLLVPCALLLSACTTPVTPAFKDIGTRSGPCIDGGPDVVAQQFYDYRIQHRNND 60

Query: 60  ITALRPYLSDKLATLLSDASRDNNHRELLTNDPFSSRTTLPDSAHVASASTIPNRDARNI 119
           ITALRPYLSD LA LLSDA+RD  H  LL +DPFSSRTT PDSA VASASTIPN DARNI
Sbjct: 61  ITALRPYLSDNLAKLLSDATRDPQHNALLQSDPFSSRTTPPDSAKVASASTIPNTDARNI 120

Query: 120 PLRVDLKQGDQGWQDEVLMIQEGQCWVIDDVRYLGGSVHATAGTLRQSIENR 171
           PLRV L QGDQ WQDEVLMI+EGQCW IDDVRY+GGSVHA AGTLRQSIENR
Sbjct: 121 PLRVKLTQGDQSWQDEVLMIREGQCWAIDDVRYIGGSVHAPAGTLRQSIENR 172


>UniRef50_A4TN56 Lipoprotein n=36 Tax=Enterobacteriaceae RepID=A4TN56_YERPP
          Length = 191

 Score =  205 bits (522), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 79/170 (46%), Positives = 101/170 (59%), Gaps = 23/170 (13%)

Query: 22  VTPAYKDNGTRSGPCVEGGPDNVAQQFYDYRI--------LHRSNDITALRPYLSDKLAT 73
           V P ++   +RS PC+EGGPD VAQ+FYD RI        L   N     RPYLS  L  
Sbjct: 23  VNPVFEATSSRSSPCIEGGPDTVAQKFYDLRIQQIGGQQGLPDDNLSAQFRPYLSQSLYN 82

Query: 74  LLSDASRDNNHR--------ELLTNDPFSSRTTLPDSAHVASASTIPNRDARNIPLRVDL 125
            +  A +  ++R        ++++ D F+S      SA VASASTIPN DARNIPLRV+L
Sbjct: 83  DIQAARKQASNRTPAQVNKTQMISGDIFTSLREGSTSASVASASTIPNTDARNIPLRVNL 142

Query: 126 K-QGDQG----WQDEVLMIQEGQCWVIDDVRYLGGSVHATAGTLRQSIEN 170
             Q   G    WQDEVLMI+EG CWV+DD+R++G  V A A +LRQ + N
Sbjct: 143 SHQMADGKAVMWQDEVLMIREGTCWVVDDIRFMG--VSAPASSLRQLLGN 190


>UniRef50_A7HVC0 Putative uncharacterized protein n=1 Tax=Parvibaculum
           lavamentivorans DS-1 RepID=A7HVC0_PARL1
          Length = 181

 Score = 55.5 bits (132), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 43/190 (22%), Positives = 75/190 (39%), Gaps = 39/190 (20%)

Query: 1   MRYSKLTMLIPCALLLSACTTVTPAYKDNGTRSGPCVEGGPDNVAQQFYDYRI------L 54
           MR  +  +L     +L+AC    P  + +  R+           A  FYD  +      +
Sbjct: 1   MRTLRPLLLFALGFMLAACGEAKP--EADALRA-----------AAVFYDIVLSARSSGV 47

Query: 55  HRSNDITALRPYLSDKLATLLSDA---------SRDNNHRELLTNDPFSSRTTLPDSAHV 105
             ++    LRP +S  L +LLS A           +N+    L  D FSS      +  +
Sbjct: 48  PDADMRARLRPVISSDLDSLLSQAAEAERRHTERVNNSEPPYLQGDIFSSLFEGATAYEI 107

Query: 106 ASASTIPNRDARNIPLRVDLKQGDQ---GWQDEVLMIQEG----QCWVIDDVRYLGGSVH 158
            +     + D R +     L    +    W D ++++  G    + W++DD+ Y G    
Sbjct: 108 GTC----DGDERRMQCEAMLAHEAEEPVQWTDRLVLVANGGPEDRRWLVDDILYGGDWDF 163

Query: 159 ATAGTLRQSI 168
           A+ GTL+ S+
Sbjct: 164 ASKGTLKSSL 173


>UniRef50_B7LL23 Putative uncharacterized protein n=5 Tax=Escherichia
           RepID=B7LL23_ESCF3
          Length = 206

 Score = 47.0 bits (110), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 51/144 (35%), Gaps = 26/144 (18%)

Query: 33  SGPCVEGGPDNVAQQFY------DYRILHRSNDITALRPYLSDKLATLLSDASRDNNHRE 86
           +G C    PD VA +FY      D       + +   + YL+  L  L+  A   N    
Sbjct: 41  TGACPAQTPDGVADKFYSTYVFSDTSFKSEKDQLAFFQKYLTPSLYQLIVGAYDRNKRDY 100

Query: 87  LL---------TNDPFSSRTTLPDSAH------VASASTIPNRDARNIPLRVDLKQGD-Q 130
            +             F+S     DS +         +S  P  +   + L       D +
Sbjct: 101 AIDPTAKPTFGDGIIFTSY--PSDSYYEKFDGVTLPSSYKPGDNNVTVALHFHFTVDDKK 158

Query: 131 GWQDEVLMIQEGQ--CWVIDDVRY 152
            WQDE LM +     CW ID++ +
Sbjct: 159 AWQDEALMARSADDGCWRIDNIIF 182


>UniRef50_Q1H0J5 Putative uncharacterized protein n=1 Tax=Methylobacillus
           flagellatus KT RepID=Q1H0J5_METFK
          Length = 181

 Score = 44.7 bits (104), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 45/121 (37%), Gaps = 7/121 (5%)

Query: 53  ILHRSNDITALRPYLSDKLATLLSDASRDNNHRELL---TNDPFSSRTTLPDSAHVASAS 109
           +           P L       L +  R     + +   + D F+S      S  +    
Sbjct: 56  MQQLDAVSRHFIPKLHRIFYISLREQHRCRTRNKPIPWSSGDLFTSNDAGYTSFTIEP-- 113

Query: 110 TIPNRDARNIPLRVDLKQGD--QGWQDEVLMIQEGQCWVIDDVRYLGGSVHATAGTLRQS 167
           +IPN+  R   +   L+Q    Q W DEV++ +E   W+I D+ Y        AG   QS
Sbjct: 114 SIPNQFGRQSTVHFSLEQNGKVQRWSDEVILHKENSQWMIYDIEYHAPFAGQKAGKSLQS 173

Query: 168 I 168
           I
Sbjct: 174 I 174


Searching..................................................done


Results from round 3


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_P75818 Uncharacterized lipoprotein ybjP n=94 Tax=Entero...   259   3e-68
UniRef50_A4W8N2 Lipoprotein n=14 Tax=Enterobacteriaceae RepID=A4...   252   5e-66
UniRef50_A4TN56 Lipoprotein n=36 Tax=Enterobacteriaceae RepID=A4...   172   3e-42
UniRef50_A7HVC0 Putative uncharacterized protein n=1 Tax=Parviba...   164   8e-40
UniRef50_Q1H0J5 Putative uncharacterized protein n=1 Tax=Methylo...   142   5e-33
UniRef50_B7LL23 Putative uncharacterized protein n=5 Tax=Escheri...   136   3e-31

Sequences not found previously or not previously below threshold:

UniRef50_C1AAU1 Putative uncharacterized protein n=1 Tax=Gemmati...    58   1e-07
UniRef50_C2FTK6 Putative uncharacterized protein n=2 Tax=Sphingo...    56   6e-07
UniRef50_C0YS39 Putative uncharacterized protein n=1 Tax=Chryseo...    52   7e-06
UniRef50_B2FK98 Putative uncharacterized protein n=2 Tax=Stenotr...    47   2e-04
UniRef50_UPI00017455D6 hypothetical protein VspiD_12630 n=1 Tax=...    45   0.001
UniRef50_B4SR97 Putative uncharacterized protein n=1 Tax=Stenotr...    44   0.002

>UniRef50_P75818 Uncharacterized lipoprotein ybjP n=94 Tax=Enterobacteriaceae
           RepID=YBJP_ECOLI
          Length = 171

 Score =  259 bits (661), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 171/171 (100%), Positives = 171/171 (100%)

Query: 1   MRYSKLTMLIPCALLLSACTTVTPAYKDNGTRSGPCVEGGPDNVAQQFYDYRILHRSNDI 60
           MRYSKLTMLIPCALLLSACTTVTPAYKDNGTRSGPCVEGGPDNVAQQFYDYRILHRSNDI
Sbjct: 1   MRYSKLTMLIPCALLLSACTTVTPAYKDNGTRSGPCVEGGPDNVAQQFYDYRILHRSNDI 60

Query: 61  TALRPYLSDKLATLLSDASRDNNHRELLTNDPFSSRTTLPDSAHVASASTIPNRDARNIP 120
           TALRPYLSDKLATLLSDASRDNNHRELLTNDPFSSRTTLPDSAHVASASTIPNRDARNIP
Sbjct: 61  TALRPYLSDKLATLLSDASRDNNHRELLTNDPFSSRTTLPDSAHVASASTIPNRDARNIP 120

Query: 121 LRVDLKQGDQGWQDEVLMIQEGQCWVIDDVRYLGGSVHATAGTLRQSIENR 171
           LRVDLKQGDQGWQDEVLMIQEGQCWVIDDVRYLGGSVHATAGTLRQSIENR
Sbjct: 121 LRVDLKQGDQGWQDEVLMIQEGQCWVIDDVRYLGGSVHATAGTLRQSIENR 171


>UniRef50_A4W8N2 Lipoprotein n=14 Tax=Enterobacteriaceae RepID=A4W8N2_ENT38
          Length = 172

 Score =  252 bits (642), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 142/172 (82%), Positives = 152/172 (88%), Gaps = 1/172 (0%)

Query: 1   MRYSKLTMLIPCALLLSACTT-VTPAYKDNGTRSGPCVEGGPDNVAQQFYDYRILHRSND 59
           MRYS LT+L+PCALLLSACTT VTPA+KD GTRSGPC++GGPD VAQQFYDYRI HR+ND
Sbjct: 1   MRYSALTLLVPCALLLSACTTPVTPAFKDIGTRSGPCIDGGPDVVAQQFYDYRIQHRNND 60

Query: 60  ITALRPYLSDKLATLLSDASRDNNHRELLTNDPFSSRTTLPDSAHVASASTIPNRDARNI 119
           ITALRPYLSD LA LLSDA+RD  H  LL +DPFSSRTT PDSA VASASTIPN DARNI
Sbjct: 61  ITALRPYLSDNLAKLLSDATRDPQHNALLQSDPFSSRTTPPDSAKVASASTIPNTDARNI 120

Query: 120 PLRVDLKQGDQGWQDEVLMIQEGQCWVIDDVRYLGGSVHATAGTLRQSIENR 171
           PLRV L QGDQ WQDEVLMI+EGQCW IDDVRY+GGSVHA AGTLRQSIENR
Sbjct: 121 PLRVKLTQGDQSWQDEVLMIREGQCWAIDDVRYIGGSVHAPAGTLRQSIENR 172


>UniRef50_A4TN56 Lipoprotein n=36 Tax=Enterobacteriaceae RepID=A4TN56_YERPP
          Length = 191

 Score =  172 bits (436), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 76/170 (44%), Positives = 99/170 (58%), Gaps = 23/170 (13%)

Query: 22  VTPAYKDNGTRSGPCVEGGPDNVAQQFYDYRIL--------HRSNDITALRPYLSDKLAT 73
           V P ++   +RS PC+EGGPD VAQ+FYD RI            N     RPYLS  L  
Sbjct: 23  VNPVFEATSSRSSPCIEGGPDTVAQKFYDLRIQQIGGQQGLPDDNLSAQFRPYLSQSLYN 82

Query: 74  LLSDASRDNNHR--------ELLTNDPFSSRTTLPDSAHVASASTIPNRDARNIPLRVDL 125
            +  A +  ++R        ++++ D F+S      SA VASASTIPN DARNIPLRV+L
Sbjct: 83  DIQAARKQASNRTPAQVNKTQMISGDIFTSLREGSTSASVASASTIPNTDARNIPLRVNL 142

Query: 126 KQ---GDQG--WQDEVLMIQEGQCWVIDDVRYLGGSVHATAGTLRQSIEN 170
                  +   WQDEVLMI+EG CWV+DD+R++G  V A A +LRQ + N
Sbjct: 143 SHQMADGKAVMWQDEVLMIREGTCWVVDDIRFMG--VSAPASSLRQLLGN 190


>UniRef50_A7HVC0 Putative uncharacterized protein n=1 Tax=Parvibaculum
           lavamentivorans DS-1 RepID=A7HVC0_PARL1
          Length = 181

 Score =  164 bits (416), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 43/190 (22%), Positives = 75/190 (39%), Gaps = 39/190 (20%)

Query: 1   MRYSKLTMLIPCALLLSACTTVTPAYKDNGTRSGPCVEGGPDNVAQQFYDYRI------L 54
           MR  +  +L     +L+AC    P  + +  R+           A  FYD  +      +
Sbjct: 1   MRTLRPLLLFALGFMLAACGEAKP--EADALRA-----------AAVFYDIVLSARSSGV 47

Query: 55  HRSNDITALRPYLSDKLATLLSDA---------SRDNNHRELLTNDPFSSRTTLPDSAHV 105
             ++    LRP +S  L +LLS A           +N+    L  D FSS      +  +
Sbjct: 48  PDADMRARLRPVISSDLDSLLSQAAEAERRHTERVNNSEPPYLQGDIFSSLFEGATAYEI 107

Query: 106 ASASTIPNRDARNIPLRVDLKQGDQ---GWQDEVLMIQEG----QCWVIDDVRYLGGSVH 158
            +     + D R +     L    +    W D ++++  G    + W++DD+ Y G    
Sbjct: 108 GTC----DGDERRMQCEAMLAHEAEEPVQWTDRLVLVANGGPEDRRWLVDDILYGGDWDF 163

Query: 159 ATAGTLRQSI 168
           A+ GTL+ S+
Sbjct: 164 ASKGTLKSSL 173


>UniRef50_Q1H0J5 Putative uncharacterized protein n=1 Tax=Methylobacillus
           flagellatus KT RepID=Q1H0J5_METFK
          Length = 181

 Score =  142 bits (357), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 45/121 (37%), Gaps = 7/121 (5%)

Query: 53  ILHRSNDITALRPYLSDKLATLLSDASRDNNHRELL---TNDPFSSRTTLPDSAHVASAS 109
           +           P L       L +  R     + +   + D F+S      S  +    
Sbjct: 56  MQQLDAVSRHFIPKLHRIFYISLREQHRCRTRNKPIPWSSGDLFTSNDAGYTSFTIEP-- 113

Query: 110 TIPNRDARNIPLRVDLKQGD--QGWQDEVLMIQEGQCWVIDDVRYLGGSVHATAGTLRQS 167
           +IPN+  R   +   L+Q    Q W DEV++ +E   W+I D+ Y        AG   QS
Sbjct: 114 SIPNQFGRQSTVHFSLEQNGKVQRWSDEVILHKENSQWMIYDIEYHAPFAGQKAGKSLQS 173

Query: 168 I 168
           I
Sbjct: 174 I 174


>UniRef50_B7LL23 Putative uncharacterized protein n=5 Tax=Escherichia
           RepID=B7LL23_ESCF3
          Length = 206

 Score =  136 bits (342), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 53/151 (35%), Gaps = 26/151 (17%)

Query: 33  SGPCVEGGPDNVAQQFY------DYRILHRSNDITALRPYLSDKLATLLSDASRDNNHRE 86
           +G C    PD VA +FY      D       + +   + YL+  L  L+  A   N    
Sbjct: 41  TGACPAQTPDGVADKFYSTYVFSDTSFKSEKDQLAFFQKYLTPSLYQLIVGAYDRNKRDY 100

Query: 87  LL---------TNDPFSSRTTLPDSAH------VASASTIPNRDARNIPLRVDLKQGD-Q 130
            +             F+S     DS +         +S  P  +   + L       D +
Sbjct: 101 AIDPTAKPTFGDGIIFTSY--PSDSYYEKFDGVTLPSSYKPGDNNVTVALHFHFTVDDKK 158

Query: 131 GWQDEVLMIQEGQ--CWVIDDVRYLGGSVHA 159
            WQDE LM +     CW ID++ +     ++
Sbjct: 159 AWQDEALMARSADDGCWRIDNIIFHEDEDNS 189


>UniRef50_C1AAU1 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca
           T-27 RepID=C1AAU1_GEMAT
          Length = 160

 Score = 57.9 bits (138), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 51/150 (34%), Gaps = 15/150 (10%)

Query: 34  GPCVEGGPDNVAQQFY------DYRILHRSNDITALRPYLSDKLATLLSDASRDNN---- 83
            P     P   A Q Y        R +   + + ALRP+L+D LA  L+ A  +      
Sbjct: 7   APKGSTTPSQTAMQLYAMLDALGVRGVPDEDALRALRPFLTDSLADALAHADAERRVAVQ 66

Query: 84  -----HRELLTNDPFSSRTTLPDSAHVASASTIPNRDARNIPLRVDLKQGDQGWQDEVLM 138
                       DPFSS       A   +     +     +      ++    W+D +++
Sbjct: 67  EAPDDKPPFADGDPFSSLFEGRTEARPDTVVMRGDTALVVMAFSNKTQRPAVNWRDTIVV 126

Query: 139 IQEGQCWVIDDVRYLGGSVHATAGTLRQSI 168
                  V+ D+RY  G      G L + +
Sbjct: 127 TPFNGRLVVADIRYGAGWEFGFTGRLLEVL 156


>UniRef50_C2FTK6 Putative uncharacterized protein n=2 Tax=Sphingobacterium
           spiritivorum RepID=C2FTK6_9SPHI
          Length = 167

 Score = 55.6 bits (132), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 46/120 (38%), Gaps = 18/120 (15%)

Query: 64  RPYLSDKLATLLSDASRDNNHRE--------------LLTNDPFSSRTTLPDSAHVASAS 109
           R  +S  LA L+  A                      ++  D F+S     D+  + +  
Sbjct: 47  RQLISPDLALLIDKAISREKDDAEKVAKSDHPGDKPLMIEGDIFTSLYEGQDTFQIDTIK 106

Query: 110 TIPNRDARNIPLRVDLKQGDQGWQDEVLMIQEGQCWVIDDVRYLGGSV-HATAGTLRQSI 168
                D+  + ++       + W+DEV++I++   W ID+V +       +T   L+Q I
Sbjct: 107 VK--GDSAFVVVQFANTGYKESWKDEVVLIKKET-WRIDNVYFGEEKDLKSTKDVLKQLI 163


>UniRef50_C0YS39 Putative uncharacterized protein n=1 Tax=Chryseobacterium gleum
           ATCC 35910 RepID=C0YS39_9FLAO
          Length = 181

 Score = 52.1 bits (123), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 48/164 (29%), Gaps = 23/164 (14%)

Query: 5   KLTMLIPCALLLSACTTVTPAYKDNGTRSGPCVEGGPDNVAQQFYDYRILHRSNDITALR 64
           KL +L    LL ++C       K N        +   +    + Y               
Sbjct: 3   KLFLLSGIFLLFASC-------KKNEAHCSLSSDAAINAKINELYTTYEKSNEAIYNQPI 55

Query: 65  P--YLSDKLATLLSDA-------------SRDNNHRELL-TNDPFSSRTTLPDSAHVASA 108
           P    SD L  +L +A             S   + + L+     FSS           SA
Sbjct: 56  PEDLFSDDLKKVLEEAINTSKADIEKVKNSDHPDEKPLIFEGALFSSLYEGFTDYKTKSA 115

Query: 109 STIPNRDARNIPLRVDLKQGDQGWQDEVLMIQEGQCWVIDDVRY 152
                     +    +L      W D + +   G+ W ID++ +
Sbjct: 116 RIKNTTAEVPVAFEYNLASPKVAWTDTIHLTNTGKEWKIDNITF 159


>UniRef50_B2FK98 Putative uncharacterized protein n=2 Tax=Stenotrophomonas
           RepID=B2FK98_STRMK
          Length = 204

 Score = 47.1 bits (110), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 59/164 (35%), Gaps = 30/164 (18%)

Query: 2   RYSKLTMLIPCALLLSACTTVTPAYKDNGTRSGPCVEGGPDNVAQQFYDYRILHRSNDIT 61
           R S+ T L    +       V P      +         P +V  + YD      SN+ T
Sbjct: 41  RMSRPTALFVLLI-------VAPLAAAASS--------DPRDVVTRLYDAIQAPTSNE-T 84

Query: 62  ALRPYLSDKLATLLSDASRDNN----------HRELLTNDPFSSRTTLPDSAHVASASTI 111
           A+ P L + L + ++                    +L   P+      P++  V     +
Sbjct: 85  AISPLLGEALRSAIAGQRAYEQACTALAAPDEKPHMLDQSPYLLAPDRPETISVG----M 140

Query: 112 PNRDARNIPLRVDLKQGDQGWQDEVLMIQEGQCWVIDDVRYLGG 155
           P        + VD+  GD  W D VL+ ++ + W + D+R+  G
Sbjct: 141 PGSSGDATWIHVDMAVGDYRWTDRVLLQRQDRDWKVMDIRWGQG 184


>UniRef50_UPI00017455D6 hypothetical protein VspiD_12630 n=1 Tax=Verrucomicrobium spinosum
           DSM 4136 RepID=UPI00017455D6
          Length = 185

 Score = 45.2 bits (105), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 51/140 (36%), Gaps = 26/140 (18%)

Query: 49  YDYRILHRSNDITALRPYLSDKLATLLSDA--------------SRDNNHRELL------ 88
           ++ R +  + +I  L P L ++L  +   A               +++ H  +L      
Sbjct: 36  WEIRGVPDAREINLLSPLLGEELIQIFKKAESQKAREQAGIKRKYKNDPHPRVLKSAWSK 95

Query: 89  TNDPFSSRTTLPDSAHVASASTIPNRDARNIPLRVDLKQGDQGWQDEVLMIQEGQCWVID 148
             D F+S     D+  V             + L   + +    W   +++ +  Q WV+ 
Sbjct: 96  EGDLFASIAESFDTFAVGFPILKSGTVKVPVHLEYLVSKPAYRWTIILVLDRSDQDWVVS 155

Query: 149 DVRYLGGSVHATAGTLRQSI 168
           D+      V+    +LR+S+
Sbjct: 156 DI------VNQDGESLRKSL 169


>UniRef50_B4SR97 Putative uncharacterized protein n=1 Tax=Stenotrophomonas
           maltophilia R551-3 RepID=B4SR97_STRM5
          Length = 162

 Score = 44.4 bits (103), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 54/142 (38%), Gaps = 17/142 (11%)

Query: 35  PCVEGGPDNVAQQFYDYRILHRSNDITALRPYLSDKLATLLSDASR----------DNNH 84
                 P +V  + Y       S++   +RP L D L+  ++               +  
Sbjct: 17  AAAASDPRDVVTRLYATVQAPASSEEV-IRPLLGDALSAAINAQRAYERACTVLAAHDEK 75

Query: 85  RELLTNDPFSSRTTLPDSAHVASASTIPNRDARNIPLRVDLKQGDQGWQDEVLMIQEGQC 144
             +L   P+      P++  V      P        ++VD+  GD  W D VL+ ++GQ 
Sbjct: 76  PHMLDQSPYLMAPDRPETVRVG----RPGPIGSATWVQVDMAVGDYRWTDRVLLQRQGQD 131

Query: 145 WVIDDVRYLGGSVHATAGTLRQ 166
           W + D+R+  G      G L+Q
Sbjct: 132 WKVMDIRWGQG--GNLIGRLKQ 151


  Database: uniref50.fasta
    Posted date:  Mar 8, 2010 10:38 AM
  Number of letters in database: 1,040,396,356
  Number of sequences in database:  3,077,464
  
Lambda     K      H
   0.308    0.121    0.312 

Lambda     K      H
   0.267   0.0372    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 854,302,351
Number of Sequences: 3077464
Number of extensions: 28600010
Number of successful extensions: 85237
Number of sequences better than 1.0e-01: 12
Number of HSP's better than  0.1 without gapping: 16
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 85191
Number of HSP's gapped (non-prelim): 23
length of query: 171
length of database: 1,040,396,356
effective HSP length: 119
effective length of query: 52
effective length of database: 674,178,140
effective search space: 35057263280
effective search space used: 35057263280
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 88 (38.6 bits)
