Phyre 2 Results for P75818

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Email | l.a.kelley@imperial.ac.uk
Description | P75818
Date | Thu Jan 5 12:14:31 GMT 2012
Unique Job ID | 51d2266632419c90

Summary |

Top model
Image coloured by rainbow N → C terminus
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Model (left) based on template c2qguA_
Top template information
PDB header:structural genomics, unknown function Chain: A: PDB Molecule:probable signal peptide protein; PDBTitle: three-dimensional structure of the phospholipid-binding protein from2 ralstonia solanacearum q8xv73_ralsq in complex with a phospholipid at3 the resolution 1.53 a. northeast structural genomics consortium4 target rsr89
Confidence and coverage
Confidence: | 84.4% | Coverage: | 37%
64 residues ( 37% of your sequence) have been modelled with 84.4% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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3D viewing
Interactive 3D view in Jmol

Sequence analysis |

Secondary structure and disorder prediction |

|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60
Sequence |  | M | R | Y | S | K | L | T | M | L | I | P | C | A | L | L | L | S | A | C | T | T | V | T | P | A | Y | K | D | N | G | T | R | S | G | P | C | V | E | G | G | P | D | N | V | A | Q | Q | F | Y | D | Y | R | I | L | H | R | S | N | D | I
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? | ? | ? |  | ? |  |  |  |  |  |  |  |  |  |  | ? |  |  |  |  |  |  | ? |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120
Sequence |  | T | A | L | R | P | Y | L | S | D | K | L | A | T | L | L | S | D | A | S | R | D | N | N | H | R | E | L | L | T | N | D | P | F | S | S | R | T | T | L | P | D | S | A | H | V | A | S | A | S | T | I | P | N | R | D | A | R | N | I | P
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? |  | ? |  |  |  |  | ? | ? |  |  |  |  |  | ? | ? |  |  | ? | ? | ? |  | ? | ? | ? | ? | ? | ? |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | .
Sequence |  | L | R | V | D | L | K | Q | G | D | Q | G | W | Q | D | E | V | L | M | I | Q | E | G | Q | C | W | V | I | D | D | V | R | Y | L | G | G | S | V | H | A | T | A | G | T | L | R | Q | S | I | E | N | R
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  | ? |  | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  | ? | ? | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |

Confidence Key
High(9) |  |  |  |  |  |  |  |  |  |  | Low (0)

? | Disordered
| Alpha helix
| Beta strand

Domain analysis |

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank | Aligned region
--- | ---
1 |
| c2qguA_ |

### PDB 2qgu chain A

Region: 93 - 156
Aligned: 64
Modelled: 64
Confidence: 84.4%
Identity: 11%
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:probable signal peptide protein;
PDBTitle: three-dimensional structure of the phospholipid-binding protein from2 ralstonia solanacearum q8xv73_ralsq in complex with a phospholipid at3 the resolution 1.53 a. northeast structural genomics consortium4 target rsr89

Phyre2
2 |
| c3dukD_ |

### PDB 3duk chain D

Region: 104 - 153
Aligned: 47
Modelled: 50
Confidence: 78.3%
Identity: 9%
PDB header:unknown function
Chain: D: PDB Molecule:ntf2-like protein of unknown function;
PDBTitle: crystal structure of a ntf2-like protein of unknown function2 (mfla_0564) from methylobacillus flagellatus kt at 2.200 a resolution

Phyre2
3 |
| d2cw9a1 |

### PDB 2cw9 chain A domain 1

Region: 57 - 154
Aligned: 94
Modelled: 98
Confidence: 77.9%
Identity: 16%
Fold: Cystatin-like
Superfamily: NTF2-like
Family: TIM44-like

Phyre2
4 |
| d1vqqa1 |

### PDB 1vqq chain A domain 1

Region: 92 - 148
Aligned: 56
Modelled: 57
Confidence: 76.0%
Identity: 11%
Fold: Cystatin-like
Superfamily: NTF2-like
Family: Penicillin binding protein 2a (PBP2A), N-terminal domain

Phyre2
5 |
| c3qk9B_ |

### PDB 3qk9 chain B

Region: 57 - 154
Aligned: 94
Modelled: 98
Confidence: 75.0%
Identity: 11%
PDB header:protein transport
Chain: B: PDB Molecule:mitochondrial import inner membrane translocase subunit
PDBTitle: yeast tim44 c-terminal domain complexed with cymal-3

Phyre2
6 |
| c3fkaD_ |

### PDB 3fka chain D

Region: 98 - 153
Aligned: 52
Modelled: 56
Confidence: 71.4%
Identity: 17%
PDB header:unknown function
Chain: D: PDB Molecule:uncharacterized ntf-2 like protein;
PDBTitle: crystal structure of a ntf-2 like protein of unknown function2 (spo1084) from silicibacter pomeroyi dss-3 at 1.69 a resolution

Phyre2
7 |
| d3blza1 |

### PDB 3blz chain A domain 1

Region: 104 - 153
Aligned: 47
Modelled: 50
Confidence: 64.6%
Identity: 11%
Fold: Cystatin-like
Superfamily: NTF2-like
Family: Sbal0622-like

Phyre2
8 |
| d1w8oa3 |

### PDB 1w8o chain A domain 3

Region: 84 - 145
Aligned: 61
Modelled: 62
Confidence: 50.6%
Identity: 10%
Fold: 6-bladed beta-propeller
Superfamily: Sialidases
Family: Sialidases (neuraminidases)

Phyre2
9 |
| d2fxta1 |

### PDB 2fxt chain A domain 1

Region: 57 - 127
Aligned: 66
Modelled: 71
Confidence: 35.3%
Identity: 9%
Fold: Cystatin-like
Superfamily: NTF2-like
Family: TIM44-like

Phyre2
10 |
| d1dmua_ |

### PDB 1dmu chain A

Region: 106 - 145
Aligned: 39
Modelled: 40
Confidence: 32.1%
Identity: 10%
Fold: Restriction endonuclease-like
Superfamily: Restriction endonuclease-like
Family: Restriction endonuclease BglI

Phyre2
11 |
| c3f7sA_ |

### PDB 3f7s chain A

Region: 93 - 164
Aligned: 72
Modelled: 72
Confidence: 31.5%
Identity: 17%
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized ntf2-like protein;
PDBTitle: crystal structure of a ntf2-like protein of unknown function (pp_4556)2 from pseudomonas putida kt2440 at 2.11 a resolution

Phyre2
12 |
| c2berA_ |

### PDB 2ber chain A

Region: 84 - 145
Aligned: 60
Modelled: 62
Confidence: 22.7%
Identity: 8%
PDB header:hydrolase
Chain: A: PDB Molecule:bacterial sialidase;
PDBTitle: y370g active site mutant of the sialidase from2 micromonospora viridifaciens in complex with beta-neu5ac3 (sialic acid).

Phyre2
13 |
| d1m98a2 |

### PDB 1m98 chain A domain 2

Region: 22 - 63
Aligned: 40
Modelled: 42
Confidence: 21.6%
Identity: 20%
Fold: Cystatin-like
Superfamily: NTF2-like
Family: Orange carotenoid protein, C-terminal domain

Phyre2
14 |
| c3gwrA_ |

### PDB 3gwr chain A

Region: 37 - 147
Aligned: 96
Modelled: 93
Confidence: 20.3%
Identity: 18%
PDB header:protein binding
Chain: A: PDB Molecule:putative calcium/calmodulin-dependent protein kinase type
PDBTitle: crystal structure of putative calcium/calmodulin-dependent protein2 kinase type ii association domain (yp_315894.1) from thiobacillus3 denitrificans atcc 25259 at 2.00 a resolution

Phyre2
15 |
| c3k7cC_ |

### PDB 3k7c chain C

Region: 55 - 147
Aligned: 90
Modelled: 93
Confidence: 16.1%
Identity: 11%
PDB header:protein binding
Chain: C: PDB Molecule:putative ntf2-like transpeptidase;
PDBTitle: crystal structure of putative ntf2-like transpeptidase (np_281412.1)2 from campylobacter jejuni at 2.00 a resolution

Phyre2
16 |
| d1kkea2 |

### PDB 1kke chain A domain 2

Region: 85 - 160
Aligned: 55
Modelled: 76
Confidence: 14.9%
Identity: 35%
Fold: Virus attachment protein globular domain
Superfamily: Virus attachment protein globular domain
Family: Reovirus attachment protein sigma 1 head domain

Phyre2
17 |
| d2j2za2 |

### PDB 2j2z chain A domain 2

Region: 129 - 149
Aligned: 21
Modelled: 21
Confidence: 13.2%
Identity: 19%
Fold: C2 domain-like
Superfamily: Periplasmic chaperone C-domain
Family: Periplasmic chaperone C-domain

Phyre2
18 |
| d1ub1a_ |

### PDB 1ub1 chain A

Region: 130 - 155
Aligned: 26
Modelled: 26
Confidence: 12.7%
Identity: 19%
Fold: DNA-binding domain
Superfamily: DNA-binding domain
Family: Methyl-CpG-binding domain, MBD

Phyre2
19 |
| c1kkeA_ |

### PDB 1kke chain A

Region: 85 - 160
Aligned: 55
Modelled: 76
Confidence: 12.5%
Identity: 35%
PDB header:viral protein
Chain: A: PDB Molecule:sigma 1 protein;
PDBTitle: crystal structure of reovirus attachment protein sigma12 trimer

Phyre2
20 |
| d3cnxa1 |

### PDB 3cnx chain A domain 1

Region: 102 - 147
Aligned: 46
Modelled: 46
Confidence: 10.7%
Identity: 9%
Fold: Cystatin-like
Superfamily: NTF2-like
Family: SAV4671-like

Phyre2
21 |
22 |
23 |
24 |
25 |
26 |
27 |
28 |
29 |
30 |
31 |
32 |
33 |
34 |
35 |
36 |
37 |
38 |
39 |
40 |
41 |
42 |
43 |
44 |

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c2qguA_ |
|  | 84.4 | 11 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:probable signal peptide protein; PDBTitle: three-dimensional structure of the phospholipid-binding protein from2 ralstonia solanacearum q8xv73_ralsq in complex with a phospholipid at3 the resolution 1.53 a. northeast structural genomics consortium4 target rsr89
2 | c3dukD_ |
|  | 78.3 | 9 | PDB header:unknown function Chain: D: PDB Molecule:ntf2-like protein of unknown function; PDBTitle: crystal structure of a ntf2-like protein of unknown function2 (mfla_0564) from methylobacillus flagellatus kt at 2.200 a resolution
3 | d2cw9a1 |
|  | 77.9 | 16 | Fold:Cystatin-like Superfamily:NTF2-like Family:TIM44-like
4 | d1vqqa1 |
|  | 76.0 | 11 | Fold:Cystatin-like Superfamily:NTF2-like Family:Penicillin binding protein 2a (PBP2A), N-terminal domain
5 | c3qk9B_ |
|  | 75.0 | 11 | PDB header:protein transport Chain: B: PDB Molecule:mitochondrial import inner membrane translocase subunit PDBTitle: yeast tim44 c-terminal domain complexed with cymal-3
6 | c3fkaD_ |
|  | 71.4 | 17 | PDB header:unknown function Chain: D: PDB Molecule:uncharacterized ntf-2 like protein; PDBTitle: crystal structure of a ntf-2 like protein of unknown function2 (spo1084) from silicibacter pomeroyi dss-3 at 1.69 a resolution
7 | d3blza1 |
|  | 64.6 | 11 | Fold:Cystatin-like Superfamily:NTF2-like Family:Sbal0622-like
8 | d1w8oa3 |
|  | 50.6 | 10 | Fold:6-bladed beta-propeller Superfamily:Sialidases Family:Sialidases (neuraminidases)
9 | d2fxta1 |
|  | 35.3 | 9 | Fold:Cystatin-like Superfamily:NTF2-like Family:TIM44-like
10 | d1dmua_ |
|  | 32.1 | 10 | Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:Restriction endonuclease BglI
11 | c3f7sA_ |
|  | 31.5 | 17 | PDB header:unknown function Chain: A: PDB Molecule:uncharacterized ntf2-like protein; PDBTitle: crystal structure of a ntf2-like protein of unknown function (pp_4556)2 from pseudomonas putida kt2440 at 2.11 a resolution
12 | c2berA_ |
|  | 22.7 | 8 | PDB header:hydrolase Chain: A: PDB Molecule:bacterial sialidase; PDBTitle: y370g active site mutant of the sialidase from2 micromonospora viridifaciens in complex with beta-neu5ac3 (sialic acid).
13 | d1m98a2 |
|  | 21.6 | 20 | Fold:Cystatin-like Superfamily:NTF2-like Family:Orange carotenoid protein, C-terminal domain
14 | c3gwrA_ |
|  | 20.3 | 18 | PDB header:protein binding Chain: A: PDB Molecule:putative calcium/calmodulin-dependent protein kinase type PDBTitle: crystal structure of putative calcium/calmodulin-dependent protein2 kinase type ii association domain (yp_315894.1) from thiobacillus3 denitrificans atcc 25259 at 2.00 a resolution
15 | c3k7cC_ |
|  | 16.1 | 11 | PDB header:protein binding Chain: C: PDB Molecule:putative ntf2-like transpeptidase; PDBTitle: crystal structure of putative ntf2-like transpeptidase (np_281412.1)2 from campylobacter jejuni at 2.00 a resolution
16 | d1kkea2 |
|  | 14.9 | 35 | Fold:Virus attachment protein globular domain Superfamily:Virus attachment protein globular domain Family:Reovirus attachment protein sigma 1 head domain
17 | d2j2za2 |
|  | 13.2 | 19 | Fold:C2 domain-like Superfamily:Periplasmic chaperone C-domain Family:Periplasmic chaperone C-domain
18 | d1ub1a_ |
|  | 12.7 | 19 | Fold:DNA-binding domain Superfamily:DNA-binding domain Family:Methyl-CpG-binding domain, MBD
19 | c1kkeA_ |
|  | 12.5 | 35 | PDB header:viral protein Chain: A: PDB Molecule:sigma 1 protein; PDBTitle: crystal structure of reovirus attachment protein sigma12 trimer
20 | d3cnxa1 |
|  | 10.7 | 9 | Fold:Cystatin-like Superfamily:NTF2-like Family:SAV4671-like
21 | c1mwuA_ |
| not modelled | 10.1 | 11 | PDB header:biosynthetic protein Chain: A: PDB Molecule:penicillin-binding protein 2a; PDBTitle: structure of methicillin acyl-penicillin binding protein 2a2 from methicillin resistant staphylococcus aureus strain3 27r at 2.60 a resolution.
22 | d2duya1 |
| not modelled | 9.9 | 27 | Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:ComEA-like
23 | d2r4ia1 |
| not modelled | 9.7 | 9 | Fold:Cystatin-like Superfamily:NTF2-like Family:CHU142-like
24 | d1g2qa_ |
| not modelled | 9.6 | 15 | Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases)
25 | c2zxkB_ |
| not modelled | 9.4 | 24 | PDB header:oxidoreductase Chain: B: PDB Molecule:red chlorophyll catabolite reductase, PDBTitle: crystal structure of semet-red chlorophyll catabolite2 reductase
26 | c3lo2A_ |
| not modelled | 9.2 | 35 | PDB header:antimicrobial protein Chain: A: PDB Molecule:neutrophil defensin 1; PDBTitle: crystal structure of human alpha-defensin 1 (y21a mutant)
27 | c3lo2B_ |
| not modelled | 9.2 | 35 | PDB header:antimicrobial protein Chain: B: PDB Molecule:neutrophil defensin 1; PDBTitle: crystal structure of human alpha-defensin 1 (y21a mutant)
28 | c3gzrA_ |
| not modelled | 9.2 | 16 | PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein with a ntf2-like fold; PDBTitle: crystal structure of an uncharacterized protein with a cystatin-like2 fold (cc_2572) from caulobacter vibrioides at 1.40 a resolution
29 | c2veeC_ |
| not modelled | 9.1 | 12 | PDB header:transport protein Chain: C: PDB Molecule:protoglobin; PDBTitle: structure of protoglobin from methanosarcina acetivorans2 c2a
30 | d1ea9c2 |
| not modelled | 8.5 | 23 | Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain
31 | c2e26A_ |
| not modelled | 7.8 | 13 | PDB header:signaling protein Chain: A: PDB Molecule:reelin; PDBTitle: crystal structure of two repeat fragment of reelin
32 | c3s6xA_ |
| not modelled | 7.8 | 35 | PDB header:viral protein Chain: A: PDB Molecule:outer capsid protein sigma-1; PDBTitle: structure of reovirus attachment protein sigma1 in complex with alpha-2 2,3-sialyllactose
33 | d1sf9a_ |
| not modelled | 7.2 | 11 | Fold:SH3-like barrel Superfamily:Hypothetical protein YfhH Family:Hypothetical protein YfhH
34 | c2v6yA_ |
| not modelled | 7.1 | 30 | PDB header:hydrolase Chain: A: PDB Molecule:aaa family atpase, p60 katanin; PDBTitle: structure of the mit domain from a s. solfataricus vps4-2 like atpase
35 | d1kt0a2 |
| not modelled | 6.8 | 19 | Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase
36 | c3ke7A_ |
| not modelled | 6.7 | 11 | PDB header:isomerase Chain: A: PDB Molecule:putative ketosteroid isomerase; PDBTitle: crystal structure of putative ketosteroid isomerase (yp_001303366.1)2 from parabacteroides distasonis atcc 8503 at 1.45 a resolution
37 | d2gxfa1 |
| not modelled | 6.7 | 8 | Fold:Cystatin-like Superfamily:NTF2-like Family:YybH-like
38 | c3lo1A_ |
| not modelled | 6.6 | 35 | PDB header:antimicrobial protein Chain: A: PDB Molecule:neutrophil defensin 1; PDBTitle: crystal structure of human alpha-defensin 1 (y16a mutant)
39 | d3bb9a1 |
| not modelled | 6.6 | 14 | Fold:Cystatin-like Superfamily:NTF2-like Family:SO0125-like
40 | c3ie4A_ |
| not modelled | 6.3 | 15 | PDB header:immune system Chain: A: PDB Molecule:gram-negative binding protein 3; PDBTitle: b-glucan binding domain of drosophila gnbp3 defines a novel2 family of pattern recognition receptor
41 | c2ky8A_ |
| not modelled | 5.6 | 27 | PDB header:transcription/dna Chain: A: PDB Molecule:methyl-cpg-binding domain protein 2; PDBTitle: solution structure and dynamic analysis of chicken mbd2 methyl binding2 domain bound to a target methylated dna sequence
42 | d2dloa2 |
| not modelled | 5.5 | 43 | Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:LIM domain
43 | d3b7ca1 |
| not modelled | 5.5 | 16 | Fold:Cystatin-like Superfamily:NTF2-like Family:SO0125-like
44 | c2vtwF_ |
| not modelled | 5.3 | 19 | PDB header:viral protein Chain: F: PDB Molecule:fiber protein 2; PDBTitle: structure of the c-terminal head domain of the fowl2 adenovirus type 1 short fibre

Binding site prediction |

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions
Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0