 |
| Job Description | P11458 | | Confidence | 14.61% | Date | Thu Jan 5 11:32:40 GMT 2012 |
| Rank | 97 | Aligned Residues | 36 |
| % Identity | 25% | Template | c3eebB_ |
| PDB info |
PDB header:toxin | Chain: B: PDB Molecule:rtx toxin rtxa; |
PDBTitle: structure of the v. cholerae rtx cysteine protease domain
|
| Resolution | 2.10 Å |
|
|   |   |
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 130 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
S | P | E | K | T | I | L | M | P | T | L | Q | A | E | C | S | L | D | L | G | C | P | V | E | E | F | N | . |
. |
. |
. |
. |
A | F | C | D | A | H | P | D | R | T | V | V | V | Y |
| Query Conservation |   |
  |
|   |
|   |
|
|
|
|
|   |   |
|
|
|
|
|
|
|   |   |   |   |
|   |   |   | . | . | . | . | . |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
| Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|   |
|
|   |
| . | . | . | . | . |
|
|
|   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |
|   |
| Template Sequence |   |
K | P | D | H | I | S | I | . |
. |
. |
. |
. |
V | G | C | S | L | V | S | D | D | K | Q | K | G | F | G | H | Q | F | I | N | A | M | D | A | N | G | L | R | V | D | V | S | V | R |
| Template Known Secondary structure |   |
|  |  |  |  |  |  | . | . | . | . | . |  | S | S | S |
| S |
| T | T | S | S | S | S |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |  |
| Template Predicted Secondary structure |   |
|
|
|  |  |  |  | . | . | . | . | . |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
131 | . | . | . | . | . | . | |
|
|
|
|
. | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|