110 d2jhfa2 Probab=98.58   E-value=1.6e-06  Score=54.60  Aligned_columns=165  Identities=18%

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCC-EEECCCHHHHHHHHHCCCCEEEEC
Q ss_conf             4211221110000012344531354456848873125543107999998621560-241275889887642388589827
Q batch____       147 QEQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHV-VAFTTSEAKREAAKALGADEVVNS  225 (349)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  225 (349)
                      .+...++.+.+...+++..+...+..+.+.++.+.+.+..+....+......... +......++............++.
T Consensus         1 ~P~e~Aa~l~ca~~Ta~~al~~~~~~~~G~~VlI~Gag~~g~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~   80 (176)
T d2jhfa2           1 SPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP   80 (176)
T ss_dssp             CCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECG
T ss_pred             CCHHHHHHHCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEECCHHHHHHHCCCCCEEEEEE
T ss_conf             98567444221599999999984288988889998167432217899999830364374141455321013673268851


Q ss_pred             CCCC------CHHCCCCCCCCCCCCCCCCCHHHHHHHHHHC-CCEEEEEECCCCCCCCCCHHHHHHCCCEEEEEECCC--
Q ss_conf             5310------0000011211110133452027878876410-873999943578655678889985681799997699--
Q batch____       226 RNAD------EMAAHLKSFDFILNTVAAPHNLDDFTTLLKR-DGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGG--  296 (349)
Q Consensus       226 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~--  296 (349)
                      ....      .........+..+.+................ .+.++.++.............++.+++++.|+++++  
T Consensus        81 ~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~l~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~ti~Gs~~Gs~~  160 (176)
T d2jhfa2          81 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFK  160 (176)
T ss_dssp             GGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCCCCCTHHHHTTCEEEECSGGGCC
T ss_pred             CCCCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHCCCEEEEEEEECCC
T ss_conf             54301289999973246874201101572022357641058980899992068987567798898348768999931831


Q ss_pred             -HHHHHHHHHHHHCCC
Q ss_conf             -899999999998589
Q batch____       297 -IPETQEMLDFCAEHG  311 (349)
Q Consensus       297 -~~~l~~~~~li~~g~  311 (349)
                       ++++.++++++++||
T Consensus       161 ~~~~~~~li~~~~~gk  176 (176)
T d2jhfa2         161 SKDSVPKLVADFMAKK  176 (176)
T ss_dssp             HHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHCCC
T ss_conf             7999999999997387