180 c3iraA_ Probab=97.51   E-value=0.00014  Score=47.19  Aligned_columns=103  Identities=9%

Q ss_pred             CCEEEEEEECCCCCCCCCCCCHHHHHHHCCCCC-CEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCEECCCCCHHH
Q ss_conf             977999952589888646840688986302343-0466676113577875698999999999628998532023333223
Q batch____        25 GNVLLIVNVASKCGLTPQYEQLENIQKAWVDRG-FMVLGFPCNQFLEQEPGSDEEIKTYCTTTWGVTFPMFSKIEVNGEG  103 (183)
Q Consensus        25 GKvvli~F~~t~Cp~~~~~~~~~~l~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (183)
                      ||+|+|+|++.||+.|..+........+..+.- ..++.|.++   .++..+..+....+....                
T Consensus        39 ~Kpi~l~~~a~wC~~C~~m~~~~f~d~~v~~~ln~~FV~vkvD---~ee~pdl~~~y~~~~~~~----------------   99 (172)
T c3iraA_          39 NKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVD---REERPDIDNIYMTVCQII----------------   99 (172)
T ss_dssp             TCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEE---TTTCHHHHHHHHHHHHHH----------------
T ss_pred             CCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHCCCEEEEEC---CCCCCCHHHHHHHHHHHH----------------
T ss_conf             9909999850787214455677634288999966491599962---886810789999999987----------------


Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEE------CCCCCCCHHHHHHHH
Q ss_conf             44789999851686555443310122102222234567744320899998998199995------689989889999999
Q batch____       104 RHPLYQKLIAAAPTAVAPEESGFYARMVSKGRAPLYPDDILWNFEKFLVGRDGKVIQRF------SPDMTPEDPIVMESI  177 (183)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~flId~~G~i~~~~------~~~~~p~~~~l~~~I  177 (183)
                                                           +++.+.|.+++++|+|+.+..-      .....+...++...|
T Consensus       100 -------------------------------------~g~~G~P~~vfltPdgkp~~~~tY~P~~~~~~~~~f~~~L~~i  142 (172)
T c3iraA_         100 -------------------------------------LGRGGWPLNIIMTPGKKPFFAGTYIPKNTRFNQIGMLELVPRI  142 (172)
T ss_dssp             -------------------------------------HSCCCSSEEEEECTTSCEEEEESSCCSSCBTTBCCHHHHHHHH
T ss_pred             -------------------------------------HCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHH
T ss_conf             -------------------------------------0889983699996899877630335877657810189999999


Q ss_pred             HHHHCC
Q ss_conf             998509
Q batch____       178 KLALAK  183 (183)
Q Consensus       178 ~~lL~~  183 (183)
                      ..+.++
T Consensus       143 ~~~~~~  148 (172)
T c3iraA_         143 KEIWEQ  148 (172)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
T ss_conf             999985