Phyre 2 alignment of Q47319 with c1jocA_

Return to main results | Retrieve Phyre Job Id

Job Description | Q47319
Confidence | 4.26% | Date | Thu Jan 5 12:36:46 GMT 2012
Rank | 95 | Aligned Residues | 34
% Identity | 21% | Template | c1jocA_
PDB info | PDB header:membrane protein | Chain: A: PDB Molecule:early endosomal autoantigen 1; | PDBTitle: eea1 homodimer of c-terminal fyve domain bound to inositol2 1,3-diphosphate
Resolution | 2.20 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . |  | . |  |  |  |  | . | . | . | . | . | . | 50 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | R | P | F | L | A | R | G | N | R | V | R | R | C | Q | R | C | L | L | P | E | K | L | C | L | . | C | . | . | . | . | S | T | I | T | P | A | Q | A | K | S | R | F
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  | . |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | G | F | . | S | V | T | V | R | R | H | H | C | R | Q | C | G | N | . | . | I | F | C | A | E | C | S | A | K | N | A | L | T | P | S | S | K | K | P | V | R | V
Template Known Secondary structure |  |  | B |  | . |  | S | S | S |  |  |  |  |  | T | T | T |  |  | . | . |  |  |  | G | G | G | S |  |  |  |  |  |  | T | T |  | S | S |  |  |  |
Template Predicted Secondary structure |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 1363 | . | . |  | . | . | . | . | 1370 | . | . | . | . | . | . | . | . | . |  |  | 1380 | . | . | . | . | . | . | . | . | . | 1390 | . | . | . | . | . | . | . | . | . | 1400 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions