Phyre 2 alignment of Q47319 with d1j3kc_

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Job Description | Q47319
Confidence | 5.51% | Date | Thu Jan 5 12:36:46 GMT 2012
Rank | 68 | Aligned Residues | 28
% Identity | 7% | Template | d1j3kc_
SCOP info | Thymidylate synthase/dCMP hydroxymethylase | Thymidylate synthase/dCMP hydroxymethylase | Thymidylate synthase/dCMP hydroxymethylase
Resolution | 2.10

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | W | P | E | A | R | K | M | F | R | K | S | P | Y | L | D | N | L | P | V | I | S | V | D | L | S | R | L | S | A | Y
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | D | S | L | K | I | Q | L | N | R | I | P | . | . | Y | P | F | P | T | L | K | L | N | P | D | I | K | N | I | E
Template Known Secondary structure |  |  |  |  |  |  |  |  | T | T | S |  |  | . | . |  |  |  |  |  |  |  |  |  | T | T |  |  | S | G | G
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 557 | . | . | 560 | . | . | . | . | . | . | . | . |  |  | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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