234 c3jr2D_ Probab=89.27   E-value=1.7  Score=23.00  Aligned_columns=195  Identities=12%

Q ss_pred             CCHHHHHHHHHHH--HHCCCCEEEECCCCCCHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCC
Q ss_conf             4889999999999--97699899986723560208999999999999997189972999648899999999999998649
Q batch____        21 LDKKAMREVADFL--INKGVDGLFYLGTGGEFSQMNTAQRMALAEEAVTIVDGRVPVLIGVGSPSTDEAVKLAQHAQAYG   98 (301)
Q Consensus        21 ID~~~~~~~i~~l--~~~Gv~gi~~~GstGE~~~Lt~eEr~~l~~~~~~~~~~~~~vi~gv~~~st~~~i~~a~~a~~~G   98 (301)
                      +|...+.+.++.+  +..+++.+=+      ++-+...+=...++...+.. +..+++...--....+..  .+.+.++|
T Consensus         8 lD~~~~~~~l~~~~~~~~~vd~iki------G~~~~~~~G~~~i~~l~~~~-~~~~i~~d~k~~d~~~~~--~~~~~~~g   78 (212)
T c3jr2D_           8 LDQTNLTDAVAVASNVASYVDVIEV------GTILAFAEGXKAVSTLRHNH-PNHILVCDXKTTDGGAIL--SRXAFEAG   78 (212)
T ss_dssp             ECCSSHHHHHHHHHHHGGGCSEEEE------CHHHHHHHTTHHHHHHHHHC-TTSEEEEEEEECSCHHHH--HHHHHHHT
T ss_pred             CCCCCHHHHHHHHHHHCCCCCEEEE------CHHHHHCCCHHHHHHHHHHC-CCCEEEEECHHCCCHHHH--HHHHHHCC
T ss_conf             0589989999999961489539997------64621111827999999866-997899751111279999--99999569


Q ss_pred             CCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEE-------CCCCCCHH
Q ss_conf             98999838868899988999999999986399899981872127776989999999857989993-------47889989
Q batch____        99 ADGIVAINPYYWKVAPRNLDDYYQQIARSVTLPVILYNFPDLTGQDLTPETVTRLALQNENIVGI-------KDTIDSVG  171 (301)
Q Consensus        99 adav~~~~P~y~~~s~~~i~~~~~~ia~a~~~piiiYn~P~~tg~~l~~~~l~~l~~~~p~i~gi-------K~s~~~~~  171 (301)
                      +|++.+..     .+..+..+.+...++..++.+++=-.|.     .+.+....+.......+..       +.......
T Consensus        79 ~d~v~vh~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (212)
T c3jr2D_          79 ADWITVSA-----AAHIATIAACKKVADELNGEIQIEIYGN-----WTXQDAKAWVDLGITQAIYHRSRDAELAGIGWTT  148 (212)
T ss_dssp             CSEEEEET-----TSCHHHHHHHHHHHHHTTCEEEEECCSS-----CCHHHHHHHHHTTCCEEEEECCHHHHHHTCCSCH
T ss_pred             CCEEEECC-----CCCHHHHHHHHHHHHHCCCEEEEEECCC-----CCHHHHHHHHCCCHHEEEEECCCCCCCCCCCCCC
T ss_conf             98999868-----8998899999999975598399997159-----9989999986089201613314653103556530


Q ss_pred             HHHHHHHHHHHCCCCEEEEEC-CHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf             999999997304995799709-689999999968985628689877999999999998899899999999999999
Q batch____       172 HLRTMINTVKSVRPSFSVFCG-YDDHLLNTMLLGGDGAITASANFAPELSVGIYRAWREGDLATAATLNKKLLQLP  246 (301)
Q Consensus       172 ~~~~~~~~~~~~~~~~~v~~G-~d~~~~~~l~~G~~G~is~~~n~~P~~~~~~~~~~~~gd~~~a~~l~~~~~~~~  246 (301)
                      ......+..+.....+.+..| ........+..|+++.+.|.+            -+.+.|-++|.++.+++.++|
T Consensus       149 ~~~~~~~~~~~~~~~i~v~gGi~~~~~~~~~~~GaD~iVVGra------------I~~a~dp~~aa~~~~~i~~~~  212 (212)
T c3jr2D_         149 DDLDKXRQLSALGIELSITGGIVPEDIYLFEGIKTKTFIAGRA------------LAGAEGQQTAAALREQIDRFW  212 (212)
T ss_dssp             HHHHHHHHHHHHTCEEEEESSCCGGGGGGGTTSCEEEEEESGG------------GSSTTHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCEEEECCH------------HHCCCCHHHHHHHHHHHHHHC
T ss_conf             0178878862278834752688812279999649989998706------------648998899999999988619