BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (928 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q9F173 DNA polymerase I n=177 Tax=Proteobacteria RepID=... 1790 0.0 UniRef50_P43741 DNA polymerase I n=222 Tax=cellular organisms Re... 1184 0.0 UniRef50_Q65W28 PolA protein n=42 Tax=Bacteria RepID=Q65W28_MANSM 1164 0.0 UniRef50_Q9HT80 DNA polymerase I n=9 Tax=Gammaproteobacteria Rep... 1126 0.0 UniRef50_A9ITV6 DNA polymerase I n=89 Tax=Proteobacteria RepID=A... 929 0.0 UniRef50_Q7VRJ4 DNA polymerase I n=3 Tax=Enterobacteriaceae RepI... 919 0.0 UniRef50_Q21YU4 DNA polymerase I n=39 Tax=Betaproteobacteria Rep... 906 0.0 UniRef50_A5EWG4 DNA polymerase I n=10 Tax=Gammaproteobacteria Re... 844 0.0 UniRef50_Q1QDQ1 DNA polymerase I n=24 Tax=cellular organisms Rep... 817 0.0 UniRef50_Q0F0N6 DNA polymerase I n=1 Tax=Mariprofundus ferrooxyd... 817 0.0 UniRef50_A5CXW1 DNA polymerase I n=2 Tax=sulfur-oxidizing symbio... 809 0.0 UniRef50_A7HP95 DNA polymerase I n=11 Tax=Alphaproteobacteria Re... 799 0.0 UniRef50_A1ASW3 DNA polymerase I n=12 Tax=Deltaproteobacteria Re... 797 0.0 UniRef50_B9M4P2 DNA polymerase I n=3 Tax=Deltaproteobacteria Rep... 782 0.0 UniRef50_A0LCQ8 DNA polymerase I n=1 Tax=Magnetococcus sp. MC-1 ... 778 0.0 UniRef50_A5WH47 DNA polymerase I n=4 Tax=Bacteria RepID=A5WH47_P... 777 0.0 UniRef50_B6R626 DNA polymerase I superfamily protein n=1 Tax=Pse... 775 0.0 UniRef50_Q6X9Q9 DNA polymerase I n=1 Tax=Spirochaeta thermophila... 768 0.0 UniRef50_B8H5J7 DNA polymerase I n=23 Tax=Alphaproteobacteria Re... 757 0.0 UniRef50_Q9S1G2 DNA polymerase I n=25 Tax=Rhizobiales RepID=DPO1... 753 0.0 UniRef50_A6KZN3 DNA polymerase I n=15 Tax=Bacteroides RepID=A6KZ... 734 0.0 UniRef50_B6IUP1 DNA polymerase I, putative n=2 Tax=Alphaproteoba... 733 0.0 UniRef50_A9H4T5 DNA polymerase I n=43 Tax=Alphaproteobacteria Re... 720 0.0 UniRef50_A4YLA1 DNA polymerase I (POL I) n=63 Tax=cellular organ... 714 0.0 UniRef50_D0RQG2 DNA polymerase I n=1 Tax=alpha proteobacterium H... 707 0.0 UniRef50_B2IJU1 DNA polymerase I n=25 Tax=cellular organisms Rep... 707 0.0 UniRef50_B0SCM1 DNA-directed DNA polymerase n=2 Tax=Leptospira b... 706 0.0 UniRef50_D1R879 Putative uncharacterized protein n=1 Tax=Parachl... 703 0.0 UniRef50_Q1V0V5 DNA polymerase I n=3 Tax=Candidatus Pelagibacter... 699 0.0 UniRef50_D0XR83 DNA polymerase I n=2 Tax=Alphaproteobacteria Rep... 698 0.0 UniRef50_Q11NX3 DNA polymerase I n=11 Tax=Bacteria RepID=Q11NX3_... 696 0.0 UniRef50_Q04Q27 DNA-directed DNA polymerase n=4 Tax=Leptospira R... 693 0.0 UniRef50_B2RLP5 DNA polymerase I n=2 Tax=Porphyromonas gingivali... 691 0.0 UniRef50_B9KYZ1 DNA polymerase I n=4 Tax=Thermomicrobia (class) ... 690 0.0 UniRef50_Q2GBP7 DNA polymerase I n=10 Tax=Alphaproteobacteria Re... 690 0.0 UniRef50_C6W4A8 DNA polymerase I n=44 Tax=Bacteria RepID=C6W4A8_... 688 0.0 UniRef50_A9G0B1 DNA polymerase I n=3 Tax=Sorangium cellulosum 'S... 687 0.0 UniRef50_B0MYJ0 Putative uncharacterized protein n=1 Tax=Alistip... 683 0.0 UniRef50_A0LIP7 DNA polymerase I n=1 Tax=Syntrophobacter fumarox... 680 0.0 UniRef50_Q2LQV1 DNA polymerase I n=1 Tax=Syntrophus aciditrophic... 674 0.0 UniRef50_C8QY72 DNA polymerase I n=1 Tax=Desulfurivibrio alkalip... 669 0.0 UniRef50_C1A3H5 DNA polymerase I n=1 Tax=Gemmatimonas aurantiaca... 667 0.0 UniRef50_Q6MEQ2 Probable DNA polymerase I n=1 Tax=Candidatus Pro... 667 0.0 UniRef50_Q1NVM3 DNA polymerase A n=2 Tax=Deltaproteobacteria Rep... 663 0.0 UniRef50_B0VJ17 DNA polymerase I n=1 Tax=Candidatus Cloacamonas ... 661 0.0 UniRef50_Q1PUU8 Stongly similair to DNA polymerase I n=1 Tax=Can... 656 0.0 UniRef50_UPI0001744922 DNA polymerase I n=1 Tax=Verrucomicrobium... 655 0.0 UniRef50_B6YQQ9 DNA polymerase I n=13 Tax=Bacteroidales RepID=B6... 652 0.0 UniRef50_B4S5F3 DNA polymerase I n=12 Tax=Chlorobiaceae RepID=B4... 651 0.0 UniRef50_C3J9S9 DNA polymerase type I n=2 Tax=Bacteria RepID=C3J... 645 0.0 UniRef50_A6CAX6 DNA polymerase I n=2 Tax=Planctomycetaceae RepID... 641 0.0 UniRef50_Q2S226 DNA polymerase I n=4 Tax=Rhodothermaceae RepID=Q... 641 0.0 UniRef50_C8PRX0 DNA polymerase I n=1 Tax=Treponema vincentii ATC... 640 0.0 UniRef50_D1CFH6 DNA polymerase I n=1 Tax=Thermobaculum terrenum ... 640 0.0 UniRef50_Q7UI29 DNA polymerase I n=1 Tax=Rhodopirellula baltica ... 639 0.0 UniRef50_C5CIW2 DNA polymerase I n=1 Tax=Kosmotoga olearia TBF 1... 639 0.0 UniRef50_A6TSU6 DNA polymerase I n=13 Tax=Clostridiaceae RepID=A... 637 0.0 UniRef50_B2UNN5 DNA polymerase I n=1 Tax=Akkermansia muciniphila... 636 e-180 UniRef50_Q3Z6P9 DNA-directed DNA polymerase I n=5 Tax=Dehalococc... 634 e-180 UniRef50_Q73M72 DNA polymerase I n=1 Tax=Treponema denticola Rep... 632 e-179 UniRef50_C0QYF7 DNA polymerase I n=3 Tax=Brachyspira RepID=C0QYF... 632 e-179 UniRef50_C6XHK7 DNA polymerase I n=1 Tax=Candidatus Liberibacter... 632 e-179 UniRef50_A6G5W6 DNA polymerase I n=2 Tax=cellular organisms RepI... 626 e-177 UniRef50_A6FZM5 DNA polymerase I n=2 Tax=Deltaproteobacteria Rep... 624 e-177 UniRef50_A7NJD5 DNA polymerase I n=2 Tax=Roseiflexus RepID=A7NJD... 624 e-177 UniRef50_B3TC83 Putative DNA polymerase family A n=1 Tax=uncultu... 623 e-177 UniRef50_Q0AVE2 DNA polymerase I n=1 Tax=Syntrophomonas wolfei s... 620 e-176 UniRef50_A7HJZ2 DNA polymerase I n=11 Tax=Bacteria RepID=A7HJZ2_... 620 e-176 UniRef50_A7HD60 DNA polymerase I n=2 Tax=Cystobacterineae RepID=... 619 e-175 UniRef50_D2R075 DNA polymerase I n=1 Tax=Pirellula staleyi DSM 6... 618 e-175 UniRef50_O08307 DNA polymerase I n=4 Tax=Chloroflexi (class) Rep... 617 e-175 UniRef50_O34996 DNA polymerase I n=38 Tax=Bacteria RepID=DPO1_BACSU 613 e-173 UniRef50_C1ZLA6 DNA polymerase I n=1 Tax=Planctomyces limnophilu... 613 e-173 UniRef50_B1GZ14 DNA polymerase I n=1 Tax=uncultured Termite grou... 610 e-172 UniRef50_C8W0H1 DNA polymerase I n=2 Tax=Clostridia RepID=C8W0H1... 609 e-172 UniRef50_A9BEU8 DNA polymerase I n=1 Tax=Petrotoga mobilis SJ95 ... 608 e-172 UniRef50_Q02DA6 DNA polymerase I n=1 Tax=Candidatus Solibacter u... 607 e-172 UniRef50_B8D217 DNA polymerase I n=1 Tax=Halothermothrix orenii ... 603 e-171 UniRef50_C9RNE9 DNA polymerase I n=1 Tax=Fibrobacter succinogene... 603 e-171 UniRef50_Q2RHE8 DNA polymerase I n=4 Tax=Clostridia RepID=Q2RHE8... 603 e-170 UniRef50_B0KAJ0 DNA polymerase I n=12 Tax=Thermoanaerobacterales... 597 e-169 UniRef50_D1BM52 DNA polymerase I n=6 Tax=Veillonellaceae RepID=D... 597 e-169 UniRef50_C7MNN5 DNA polymerase I n=2 Tax=Coriobacteriaceae RepID... 592 e-167 UniRef50_Q1D7R1 DNA polymerase I n=4 Tax=Myxococcaceae RepID=Q1D... 591 e-167 UniRef50_Q6MPP6 DNA polymerase I n=1 Tax=Bdellovibrio bacteriovo... 590 e-167 UniRef50_C4Z0G0 DNA polymerase I n=23 Tax=Bacteria RepID=C4Z0G0_... 587 e-166 UniRef50_Q2JPZ4 DNA polymerase I n=3 Tax=Cyanobacteria RepID=Q2J... 587 e-166 UniRef50_B9L837 DNA polymerase I n=2 Tax=Nautiliaceae RepID=B9L8... 581 e-164 UniRef50_C4Z982 DNA polymerase I n=2 Tax=Clostridiales RepID=C4Z... 574 e-162 UniRef50_Q55971 DNA polymerase I n=13 Tax=Cyanobacteria RepID=DP... 572 e-161 UniRef50_Q5HCC8 DNA polymerase I n=14 Tax=Rickettsiales RepID=Q5... 572 e-161 UniRef50_C2MBR8 DNA polymerase type I n=1 Tax=Porphyromonas ueno... 571 e-161 UniRef50_Q7WZP8 DNA polymerase type I n=2 Tax=unclassified Bacte... 570 e-161 UniRef50_C5B5N3 DNA polymerase I n=1 Tax=Methylobacterium extorq... 570 e-161 UniRef50_Q6X9S0 DNA polymerase I n=3 Tax=Bacillales RepID=Q6X9S0... 569 e-160 UniRef50_D1VS49 DNA polymerase I n=1 Tax=Peptoniphilus lacrimali... 569 e-160 UniRef50_C7HT94 DNA polymerase I n=1 Tax=Anaerococcus vaginalis ... 568 e-160 UniRef50_A1QZY0 DNA polymerase I n=1 Tax=Borrelia turicatae 91E1... 567 e-159 UniRef50_Q04957 DNA polymerase I n=117 Tax=Firmicutes RepID=DPO1... 567 e-159 UniRef50_Q59156 DNA polymerase I n=6 Tax=Clostridia RepID=DPO1_A... 566 e-159 UniRef50_Q9RAA9 DNA polymerase I n=2 Tax=spotted fever group Rep... 566 e-159 UniRef50_A6NVK8 DNA polymerase I n=2 Tax=Bacteria RepID=A6NVK8_9... 566 e-159 UniRef50_B1WPN5 DNA polymerase I n=13 Tax=Bacteria RepID=B1WPN5_... 565 e-159 UniRef50_D1AZX7 DNA polymerase I n=3 Tax=Campylobacterales RepID... 565 e-159 UniRef50_Q1RH76 DNA polymerase I n=18 Tax=Rickettsia RepID=DPO1_... 565 e-159 UniRef50_B9YEU0 DNA polymerase I n=2 Tax=Cyanobacteria RepID=B9Y... 564 e-159 UniRef50_A0PZF5 DNA polymerase I n=27 Tax=Clostridia RepID=A0PZF... 561 e-158 UniRef50_B8I3Y7 DNA polymerase I n=6 Tax=Clostridium RepID=B8I3Y... 560 e-158 UniRef50_D0WFK8 DNA polymerase I n=2 Tax=Coriobacteriaceae RepID... 558 e-157 UniRef50_D2RIE4 DNA polymerase I n=5 Tax=Clostridiales RepID=D2R... 558 e-157 UniRef50_P74933 DNA polymerase I n=3 Tax=Bacteria RepID=DPO1_TREPA 558 e-157 UniRef50_B6G9J6 Putative uncharacterized protein n=2 Tax=Collins... 556 e-156 UniRef50_D0LQ66 DNA polymerase I n=1 Tax=Haliangium ochraceum DS... 554 e-156 UniRef50_Q3AZ16 DNA polymerase A n=12 Tax=Chroococcales RepID=Q3... 554 e-156 UniRef50_B5RMA2 DNA polymerase I n=2 Tax=Borrelia RepID=B5RMA2_B... 553 e-155 UniRef50_C7RDU0 DNA polymerase I n=3 Tax=Anaerococcus RepID=C7RD... 551 e-155 UniRef50_B5YDJ0 DNA polymerase I n=3 Tax=Dictyoglomus RepID=B5YD... 548 e-154 UniRef50_B4U0B7 DNA polymerase I n=5 Tax=Streptococcus RepID=B4U... 545 e-153 UniRef50_UPI0001978038 DNA polymerase I n=1 Tax=Helicobacter cin... 545 e-153 UniRef50_UPI00016BFC66 DNA polymerase I n=1 Tax=Epulopiscium sp.... 545 e-153 UniRef50_B2A646 DNA polymerase I n=1 Tax=Natranaerobius thermoph... 545 e-153 UniRef50_Q1JIU7 DNA polymerase I n=14 Tax=Streptococcus RepID=Q1... 544 e-153 UniRef50_O51498 DNA polymerase I n=20 Tax=Borrelia RepID=DPO1_BORBU 542 e-152 UniRef50_UPI0001C17162 DNA polymerase A n=2 Tax=Nostocaceae RepI... 541 e-152 UniRef50_Q30R59 DNA polymerase A n=6 Tax=Epsilonproteobacteria R... 541 e-152 UniRef50_C5RBK8 DNA polymerase I n=9 Tax=Lactobacillales RepID=C... 540 e-151 UniRef50_B1YKA1 DNA polymerase I n=3 Tax=Bacilli RepID=B1YKA1_EXIS2 538 e-151 UniRef50_D2VA69 DNA polymerase I n=1 Tax=Naegleria gruberi RepID... 536 e-150 UniRef50_B0S404 DNA polymerase I n=2 Tax=Finegoldia magna RepID=... 536 e-150 UniRef50_A2C810 DNA polymerase I n=16 Tax=Cyanobacteria RepID=A2... 535 e-150 UniRef50_C8W7U1 DNA polymerase I n=3 Tax=Coriobacteriaceae RepID... 535 e-150 UniRef50_B8FU82 DNA polymerase I n=2 Tax=Desulfitobacterium hafn... 533 e-149 UniRef50_P59200 DNA polymerase I n=187 Tax=Firmicutes RepID=DPO1... 532 e-149 UniRef50_A8FKC7 DNA polymerase I n=20 Tax=Campylobacter RepID=A8... 530 e-148 UniRef50_Q04G12 DNA polymerase I n=28 Tax=Lactobacillales RepID=... 529 e-148 UniRef50_B1C859 DNA polymerase I n=1 Tax=Anaerofustis stercoriho... 527 e-148 UniRef50_C8PHS8 DNA polymerase I n=2 Tax=Campylobacter RepID=C8P... 527 e-148 UniRef50_D2QFD0 DNA polymerase I n=3 Tax=Bacteria RepID=D2QFD0_9... 525 e-147 UniRef50_B1BYY4 DNA polymerase I n=4 Tax=Bacteria RepID=B1BYY4_9... 525 e-147 UniRef50_B5YG86 DNA polymerase I n=1 Tax=Thermodesulfovibrio yel... 524 e-147 UniRef50_B9Y7P1 DNA polymerase I n=2 Tax=Erysipelotrichaceae Rep... 524 e-147 UniRef50_B0PCZ2 DNA polymerase I n=3 Tax=Clostridiales RepID=B0P... 523 e-146 UniRef50_C1A095 DNA polymerase I n=60 Tax=Actinomycetales RepID=... 520 e-146 UniRef50_D1AJI6 DNA polymerase I n=2 Tax=Fusobacteriaceae RepID=... 520 e-145 UniRef50_Q4JW27 DNA polymerase I n=2 Tax=Corynebacterium jeikeiu... 520 e-145 UniRef50_Q7VGK4 DNA polymerase I n=8 Tax=Campylobacterales RepID... 517 e-145 UniRef50_A5TW64 DNA-directed DNA polymerase I n=10 Tax=Fusobacte... 516 e-144 UniRef50_B2KCD2 DNA polymerase I n=1 Tax=Elusimicrobium minutum ... 515 e-144 UniRef50_A5CDT3 DNA polymerase I n=2 Tax=Orientia tsutsugamushi ... 515 e-144 UniRef50_D0L9T3 DNA polymerase I n=2 Tax=Corynebacterineae RepID... 507 e-142 UniRef50_A9NF42 DNA polymerase I n=1 Tax=Acholeplasma laidlawii ... 506 e-141 UniRef50_C3WHF0 DNA polymerase I n=3 Tax=Fusobacterium RepID=C3W... 505 e-141 UniRef50_P46835 DNA polymerase I n=51 Tax=Actinobacteridae RepID... 503 e-140 UniRef50_C4LIB4 DNA polymerase I n=1 Tax=Corynebacterium kroppen... 502 e-140 UniRef50_A9KNZ3 DNA polymerase I n=4 Tax=Firmicutes RepID=A9KNZ3... 500 e-139 UniRef50_UPI0001BC5C75 DNA polymerase I n=3 Tax=Fusobacterium Re... 498 e-139 UniRef50_A8R8A1 DNA polymerase I n=2 Tax=unclassified Erysipelot... 497 e-139 UniRef50_Q118S8 DNA polymerase I n=4 Tax=Cyanobacteria RepID=Q11... 491 e-137 UniRef50_Q252Y8 DNA polymerase I n=14 Tax=Chlamydiaceae RepID=Q2... 491 e-137 UniRef50_A6DML3 DNA-directed DNA polymerase, DNA polimerase I pr... 491 e-137 UniRef50_C7GZ50 DNA polymerase I n=1 Tax=Eubacterium saphenum AT... 488 e-136 UniRef50_UPI0001976BF8 DNA polymerase I n=1 Tax=Bifidobacterium ... 480 e-133 UniRef50_C8NZ98 DNA polymerase I n=1 Tax=Erysipelothrix rhusiopa... 475 e-132 UniRef50_A0JWM3 DNA polymerase I n=7 Tax=Actinobacteria (class) ... 471 e-131 UniRef50_C5CBM1 DNA polymerase I n=2 Tax=Micrococcus luteus NCTC... 469 e-130 UniRef50_C2BWF0 DNA-directed DNA polymerase n=1 Tax=Mobiluncus c... 469 e-130 UniRef50_C7H3Z2 DNA polymerase I n=2 Tax=Ruminococcaceae RepID=C... 465 e-129 UniRef50_B2GGW1 DNA polymerase I n=1 Tax=Kocuria rhizophila DC22... 460 e-127 UniRef50_D2NTK8 DNA polymerase I n=2 Tax=Rothia mucilaginosa Rep... 456 e-126 UniRef50_Q14QK7 DNA polymerase I n=1 Tax=Spiroplasma citri RepID... 449 e-124 UniRef50_B8DUU4 DNA polymerase I n=16 Tax=Bifidobacterium RepID=... 447 e-124 UniRef50_C7LZ56 DNA polymerase I n=1 Tax=Acidimicrobium ferrooxi... 442 e-122 UniRef50_B0TER6 DNA polymerase i n=2 Tax=Heliobacteriaceae RepID... 437 e-121 UniRef50_D1PTJ0 DNA-directed DNA polymerase I (Fragment) n=1 Tax... 435 e-120 UniRef50_Q2SRK9 DNA polymerase I n=4 Tax=Mollicutes RepID=Q2SRK9... 425 e-117 UniRef50_A8SN89 DNA polymerase I n=2 Tax=Clostridiales Family XI... 418 e-115 UniRef50_C9LLQ0 DNA polymerase I n=1 Tax=Dialister invisus DSM 1... 405 e-111 UniRef50_C7GEY2 DNA polymerase I n=6 Tax=Clostridiales RepID=C7G... 397 e-109 UniRef50_Q3ABL3 DNA polymerase I n=1 Tax=Carboxydothermus hydrog... 395 e-108 UniRef50_C0X9C2 Possible DNA polymerase I (Fragment) n=3 Tax=Fir... 389 e-106 UniRef50_B2TNM6 DNA polymerase I n=7 Tax=Clostridiales RepID=B2T... 388 e-106 UniRef50_Q1II21 DNA polymerase I n=2 Tax=Acidobacteria RepID=Q1I... 387 e-105 UniRef50_C4GAN0 Putative uncharacterized protein n=1 Tax=Shuttle... 385 e-105 UniRef50_Q2JCJ5 DNA polymerase I n=10 Tax=Actinomycetales RepID=... 384 e-104 UniRef50_Q9ZJE9 DNA polymerase I n=17 Tax=Helicobacter RepID=DPO... 382 e-104 UniRef50_P52027 DNA polymerase I n=4 Tax=Deinococci RepID=DPO1_D... 381 e-104 UniRef50_Q2GI23 DNA polymerase I n=6 Tax=Rickettsiales RepID=Q2G... 372 e-101 UniRef50_B6WQX5 Putative uncharacterized protein n=1 Tax=Desulfo... 370 e-100 UniRef50_B8IZN9 DNA polymerase I n=1 Tax=Desulfovibrio desulfuri... 366 2e-99 UniRef50_P52028 DNA polymerase I, thermostable n=18 Tax=Bacteria... 362 3e-98 UniRef50_D0YSZ1 DNA polymerase I n=6 Tax=Actinobacteridae RepID=... 354 9e-96 UniRef50_C6C0R6 DNA polymerase I n=3 Tax=Desulfovibrio RepID=C6C... 354 1e-95 UniRef50_C2D755 DNA-directed DNA polymerase n=1 Tax=Atopobium va... 350 2e-94 UniRef50_C0E901 Putative uncharacterized protein (Fragment) n=2 ... 350 2e-94 UniRef50_Q1AUF6 DNA polymerase I n=1 Tax=Rubrobacter xylanophilu... 348 7e-94 UniRef50_B0MR22 DNA polymerase I n=1 Tax=Eubacterium siraeum DSM... 347 2e-93 UniRef50_Q72ES3 DNA polymerase I n=3 Tax=Desulfovibrio vulgaris ... 343 2e-92 UniRef50_C3XEZ4 DNA polymerase I n=3 Tax=Bacteria RepID=C3XEZ4_9... 341 7e-92 UniRef50_C1SHV2 DNA polymerase I n=1 Tax=Denitrovibrio acetiphil... 341 8e-92 UniRef50_UPI0001C32326 DNA polymerase I n=1 Tax=Conexibacter woe... 339 3e-91 UniRef50_Q1LTX9 DNA polymerase I n=1 Tax=Baumannia cicadellinico... 337 1e-90 UniRef50_D2RAL7 DNA-directed DNA polymerase n=2 Tax=Gardnerella ... 336 2e-90 UniRef50_Q8I7W9 Mitochondrial DNA polymerase A n=2 Tax=Eukaryota... 336 2e-90 UniRef50_Q30VQ3 DNA polymerase I n=7 Tax=Desulfovibrionales RepI... 334 8e-90 UniRef50_Q057H2 5'-3' exonuclease domain of DNA polymerase I n=2... 334 8e-90 UniRef50_UPI00016C3887 DNA polymerase I n=1 Tax=Gemmata obscurig... 333 2e-89 UniRef50_C3U0N4 DNA polymerase I n=1 Tax=uncultured bacterium Re... 332 5e-89 UniRef50_A3EQ00 DNA polymerase I n=3 Tax=Leptospirillum RepID=A3... 325 7e-87 UniRef50_C7N982 DNA polymerase I n=6 Tax=Leptotrichia RepID=C7N9... 317 1e-84 UniRef50_C1TPP4 DNA polymerase I n=2 Tax=Synergistaceae RepID=C1... 310 1e-82 UniRef50_C4FFL7 Putative uncharacterized protein n=2 Tax=Bifidob... 308 6e-82 UniRef50_Q2GD93 DNA polymerase I n=2 Tax=Neorickettsia RepID=Q2G... 307 2e-81 UniRef50_D1AV04 DNA polymerase I n=1 Tax=Streptobacillus monilif... 305 8e-81 UniRef50_D1Y4U0 DNA polymerase I n=1 Tax=Pyramidobacter piscolen... 302 3e-80 UniRef50_A5D075 DNA polymerase I-3'-5' exonuclease and polymeras... 290 2e-76 UniRef50_D1B5M0 DNA polymerase I n=1 Tax=Thermanaerovibrio acida... 286 2e-75 UniRef50_C3U0N1 Truncated DNA polymerase I n=1 Tax=uncultured ba... 276 2e-72 UniRef50_C8VXR3 DNA-directed DNA polymerase n=1 Tax=Desulfotomac... 273 2e-71 UniRef50_B3RWI3 Putative uncharacterized protein (Fragment) n=1 ... 269 5e-70 UniRef50_A3DFZ4 DNA-directed DNA polymerase n=3 Tax=Clostridium ... 266 2e-69 UniRef50_B0TCV6 DNA polymerase i n=1 Tax=Heliobacterium modestic... 265 6e-69 UniRef50_B4AHF3 DNA polymerase I n=1 Tax=Bacillus pumilus ATCC 7... 263 2e-68 UniRef50_Q89AD1 5'-3' exonuclease n=1 Tax=Buchnera aphidicola (B... 257 2e-66 UniRef50_P30314 DNA polymerase n=4 Tax=Caudovirales RepID=DPOL_B... 256 3e-66 UniRef50_C3ZGQ2 DNA polymerase I n=1 Tax=Branchiostoma floridae ... 256 4e-66 UniRef50_Q8K9D0 5'-3' exonuclease n=4 Tax=Buchnera aphidicola Re... 252 4e-65 UniRef50_C3YL74 Putative uncharacterized protein (Fragment) n=1 ... 248 8e-64 UniRef50_Q7Z5Q5 DNA polymerase nu n=15 Tax=Amniota RepID=DPOLN_H... 246 3e-63 UniRef50_Q1ARA6 DNA polymerase I n=1 Tax=Rubrobacter xylanophilu... 246 4e-63 UniRef50_A5X572 DNA polymerase nu n=8 Tax=Euteleostomi RepID=A5X... 242 5e-62 UniRef50_Q7TQ07 DNA polymerase nu n=13 Tax=Tetrapoda RepID=DPOLN... 241 8e-62 UniRef50_UPI0000D572BA PREDICTED: similar to DNA polymerase thet... 241 9e-62 UniRef50_UPI000190CBC4 DNA polymerase I n=1 Tax=Salmonella enter... 239 4e-61 UniRef50_Q8VL18 DNA polymerase I (Fragment) n=27 Tax=Bacteria Re... 237 2e-60 UniRef50_B8C4R5 DNA polymerase (Fragment) n=1 Tax=Thalassiosira ... 236 3e-60 UniRef50_UPI00019050E7 DNA polymerase I n=2 Tax=Rhizobium etli R... 236 3e-60 UniRef50_UPI000180C99B PREDICTED: similar to DNA polymerase thet... 235 7e-60 UniRef50_C1XI40 DNA polymerase I n=24 Tax=Bacteria RepID=C1XI40_... 234 1e-59 UniRef50_B3M1V8 GF17871 n=1 Tax=Drosophila ananassae RepID=B3M1V... 232 7e-59 UniRef50_B4KC49 GI21961 n=1 Tax=Drosophila mojavensis RepID=B4KC... 229 3e-58 UniRef50_A9U2H4 Predicted protein n=1 Tax=Physcomitrella patens ... 229 4e-58 UniRef50_Q7TQC0 DNA polymerase Q n=13 Tax=Deuterostomia RepID=Q7... 226 2e-57 UniRef50_C9Y9S8 Putative uncharacterized protein n=1 Tax=Curviba... 225 5e-57 UniRef50_B2V602 5'-3' exonuclease n=4 Tax=Hydrogenothermaceae Re... 225 5e-57 UniRef50_A4RWY1 Predicted protein n=2 Tax=Ostreococcus RepID=A4R... 224 2e-56 UniRef50_B4NI17 GK13557 n=1 Tax=Drosophila willistoni RepID=B4NI... 223 2e-56 UniRef50_B4MBB7 GJ14321 n=1 Tax=Drosophila virilis RepID=B4MBB7_... 223 3e-56 UniRef50_Q588V7 Helicase and polymerase containing protein TEBIC... 223 4e-56 UniRef50_O18475 FI03732p n=5 Tax=melanogaster subgroup RepID=O18... 222 4e-56 UniRef50_C4LXM4 DNA polymerase I n=4 Tax=Entamoeba RepID=C4LXM4_... 220 2e-55 >UniRef50_Q9F173 DNA polymerase I n=177 Tax=Proteobacteria RepID=DPO1_SALTY Length = 928 Score = 1790 bits (4636), Expect = 0.0, Method: Compositional matrix adjust. Identities = 871/928 (93%), Positives = 906/928 (97%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 MVQIP+NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQY+PTHAAV Sbjct: 1 MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYQPTHAAV 60 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL 180 LAREAEK GRPVLISTGDKDMAQLVTPNITLINTMTNTILGP+EVVNKYGVPPELIIDFL Sbjct: 121 LAREAEKVGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPDEVVNKYGVPPELIIDFL 180 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGL+FRGAKTMA KL QNK Sbjct: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLTFRGAKTMAGKLAQNK 240 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 +VAYLSY+LATIKTDVELELTCEQLEVQQP A+ELLGLFKKYEFKRWTADVE+GKWLQAK Sbjct: 241 DVAYLSYKLATIKTDVELELTCEQLEVQQPIADELLGLFKKYEFKRWTADVESGKWLQAK 300 Query: 301 GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDS 360 GAKPAAKPQET V DE+P A +SY+NYVTILD+ TL++WI KL+KAPVFAFDTETDS Sbjct: 301 GAKPAAKPQETVVIDESPSEPAAALSYENYVTILDDVTLESWIEKLKKAPVFAFDTETDS 360 Query: 361 LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN 420 LDNI+ANLVGLSFAIEPGVAAY+PVAHDYLDAPDQISR+RALELLKPLLEDEK KVGQN Sbjct: 361 LDNIAANLVGLSFAIEPGVAAYVPVAHDYLDAPDQISRQRALELLKPLLEDEKVRKVGQN 420 Query: 421 LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG 480 LKYDRG+L NYGIELRGIAFDTMLESYILNSVAGRHDMDSL++RWLKHKTITFE+IAGKG Sbjct: 421 LKYDRGVLQNYGIELRGIAFDTMLESYILNSVAGRHDMDSLSDRWLKHKTITFEDIAGKG 480 Query: 481 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI 540 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWP+LQ+HKGPLNVFENIEMPLVPVLSR+ Sbjct: 481 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPELQQHKGPLNVFENIEMPLVPVLSRV 540 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK 600 ERNGVKIDP VLH HSEE+TLRLAELEKKAH+IAGE FNLSSTKQLQTILFEKQGIKPLK Sbjct: 541 ERNGVKIDPAVLHKHSEEITLRLAELEKKAHDIAGEAFNLSSTKQLQTILFEKQGIKPLK 600 Query: 601 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH Sbjct: 601 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRD 720 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY+IVSADYSQIELRIMAHLSRD Sbjct: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYLIVSADYSQIELRIMAHLSRD 720 Query: 721 KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 KGLLTAFAEGKDIHRATAAEVFGLPL++VT EQRRSAKAINFGLIYGMSAFGL+RQLNIP Sbjct: 721 KGLLTAFAEGKDIHRATAAEVFGLPLDSVTGEQRRSAKAINFGLIYGMSAFGLSRQLNIP 780 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETL+GRRLYLPDIKSSN ARRA AE Sbjct: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLEGRRLYLPDIKSSNAARRAGAE 840 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDD+DAVAK+I Sbjct: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDLDAVAKRI 900 Query: 901 HQLMENCTRLDVPLLVEVGSGENWDQAH 928 HQLMENCTR+DVPLLVEVGSGENWDQAH Sbjct: 901 HQLMENCTRIDVPLLVEVGSGENWDQAH 928 >UniRef50_P43741 DNA polymerase I n=222 Tax=cellular organisms RepID=DPO1_HAEIN Length = 930 Score = 1184 bits (3064), Expect = 0.0, Method: Compositional matrix adjust. Identities = 588/935 (62%), Positives = 715/935 (76%), Gaps = 12/935 (1%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 M QI NPL+LVDGSSYLYRA+HAFP LTN+AGEPT AMYGVLNML+SLI Q +PTH AV Sbjct: 1 MAQIATNPLVLVDGSSYLYRAFHAFPSLTNAAGEPTSAMYGVLNMLKSLISQVQPTHIAV 60 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 VFDAKGKTFRDE+FE YKSHRPPMPDDLR QI+PLH M++A+G+PLL V G+EADDVIGT Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGIEADDVIGT 120 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL 180 LA +A G+ VLISTGDKDMAQLV NI LINTM N++L + V+ KYG+PPELIID+L Sbjct: 121 LALQASSLGKKVLISTGDKDMAQLVDDNIMLINTMNNSLLDRKGVIEKYGIPPELIIDYL 180 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 ALMGDS+DNIPGV GVGEKTA LLQG+G + +YA EK+A L RGAK + KL K Sbjct: 181 ALMGDSADNIPGVAGVGEKTALGLLQGIGSMAEIYANLEKVAELPIRGAKKLGEKLLAEK 240 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAG-KWLQA 299 A LSY LATIKTDVEL +T +QL + + ++L+ F +YEFKRW +V G + Sbjct: 241 NNADLSYTLATIKTDVELNVTTDQLLLGESQKDQLIEYFARYEFKRWLNEVMNGADSITQ 300 Query: 300 KGAKPA------AKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFA 353 +P A Q+ S + P++ I Y T+L + L WI KL A + A Sbjct: 301 TTEQPVKMNQYKATSQDQSAVENTPKIQ---IDRTKYETLLTQADLTRWIEKLNAAKLIA 357 Query: 354 FDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEK 413 DTETDSLD +SANLVG+SFA+E G AAY+P+ DYLDAP + + AL +KP+LE+ Sbjct: 358 VDTETDSLDYMSANLVGISFALENGEAAYLPLQLDYLDAPKTLEKSTALAAIKPILENPN 417 Query: 414 ALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITF 473 K+GQN+K+D I A +GIEL+G+ FDTML SY LNS GRH+MD LA+R+L H+TI F Sbjct: 418 IHKIGQNIKFDESIFARHGIELQGVEFDTMLLSYTLNST-GRHNMDDLAKRYLGHETIAF 476 Query: 474 EEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPL 533 E +AGKGK+QLTFNQI LE+A YAAEDADVT++L +W LQ+ + +++ +E+PL Sbjct: 477 ESLAGKGKSQLTFNQIPLEQATEYAAEDADVTMKLQQALWLKLQEEPTLVELYKTMELPL 536 Query: 534 VPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEK 593 + VLSR+ER GV ID L S E+ RL LEK+A+ +AG+ FNL+STKQLQ ILF+K Sbjct: 537 LHVLSRMERTGVLIDSDALFMQSNEIASRLTALEKQAYALAGQPFNLASTKQLQEILFDK 596 Query: 594 QGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTG 653 + L+KTP GAPST+EEVLEEL+ + LPK+++++RGL+KLKSTYTDKLP M+N +TG Sbjct: 597 LELPVLQKTPKGAPSTNEEVLEELSYSHELPKILVKHRGLSKLKSTYTDKLPQMVNSQTG 656 Query: 654 RVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRI 713 RVHTSYHQAVTATGRLSS+DPNLQNIP+RNEEGR IRQAFIA E Y IV+ADYSQIELRI Sbjct: 657 RVHTSYHQAVTATGRLSSSDPNLQNIPIRNEEGRHIRQAFIAREGYSIVAADYSQIELRI 716 Query: 714 MAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGL 773 MAHLS D+GL+ AF++GKDIHR+TAAE+FG+ L+ VTSEQRR+AKAINFGLIYGMSAFGL Sbjct: 717 MAHLSGDQGLINAFSQGKDIHRSTAAEIFGVSLDEVTSEQRRNAKAINFGLIYGMSAFGL 776 Query: 774 ARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNG 833 +RQL I R +AQKYMDLYF+RYP V ++M R +AK QGYVETL GRRLYLPDI SSN Sbjct: 777 SRQLGISRADAQKYMDLYFQRYPSVQQFMTDIREKAKAQGYVETLFGRRLYLPDINSSNA 836 Query: 834 ARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDV 893 RR AER AINAPMQGTAADIIKRAMI +D ++ + P + MIMQVHDELVFEV + V Sbjct: 837 MRRKGAERVAINAPMQGTAADIIKRAMIKLDEVIRHD-PDIEMIMQVHDELVFEVRSEKV 895 Query: 894 DAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 +QI Q ME L VPL+VEVG G+NWD+AH Sbjct: 896 AFFREQIKQHMEAAAELVVPLIVEVGVGQNWDEAH 930 >UniRef50_Q65W28 PolA protein n=42 Tax=Bacteria RepID=Q65W28_MANSM Length = 965 Score = 1164 bits (3011), Expect = 0.0, Method: Compositional matrix adjust. Identities = 598/964 (62%), Positives = 725/964 (75%), Gaps = 44/964 (4%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 M QI QNPL+LVDGSSYLYRA+HAFPPLTNS GEPTGAM+GVLNML+SLI Q +P+H AV Sbjct: 10 MAQIAQNPLVLVDGSSYLYRAFHAFPPLTNSLGEPTGAMFGVLNMLKSLITQVQPSHIAV 69 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 VFDAKGKTFRDELFE YKSHRPPMPDDLR QI+PLH +++A+G+PLL++ GVEADDVIGT Sbjct: 70 VFDAKGKTFRDELFEQYKSHRPPMPDDLRKQIQPLHDIIRALGIPLLSIEGVEADDVIGT 129 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL 180 LA +A AG+ VLISTGDKDMAQLV NI LINTM NT+L E V+ KYG+PPELIID+L Sbjct: 130 LALQASSAGKKVLISTGDKDMAQLVDDNIMLINTMNNTLLDREGVIEKYGIPPELIIDYL 189 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 ALMGDSSDNIPG+ GVGEKTA LLQG+G + +YA +K+A L RGAK + KL K Sbjct: 190 ALMGDSSDNIPGISGVGEKTALGLLQGIGSMAEIYANLDKVADLPIRGAKKLGEKLAAAK 249 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRW-----------TA 289 A LSY LATIKTDVEL+L EQL + +EL+ F +YEFKRW T Sbjct: 250 ADADLSYVLATIKTDVELDLNPEQLIIGTANKDELIEYFARYEFKRWLNEALNDESSVTK 309 Query: 290 DVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKA 349 E + A PA QE++V + + I Y T+ ++ L+ WI K+ + Sbjct: 310 PQEQAVKINNYQATPALAKQESAVKN------SVKIDRTLYETVDNQAKLQQWIEKIRQV 363 Query: 350 PVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAH-------------DYLDAPDQI 396 + A DTET++LD + A LVG+SFA+E G A YIP+AH D +Q Sbjct: 364 KLVAVDTETNALDPMLAELVGISFALENGEACYIPLAHVHQVAAQAENAQGDLFAESEQS 423 Query: 397 SRER------------ALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTML 444 S R L LKPLLE+ + K+GQN+KYD I AN GI ++G+ FDTML Sbjct: 424 SESRWEPVVGQLNKAECLSQLKPLLENPEIKKIGQNIKYDLTIFANNGINMQGVTFDTML 483 Query: 445 ESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADV 504 ESY+LNS GRH+MD LAER+L H TI FE+IAGKGKNQLTF+QI L++A YAAEDADV Sbjct: 484 ESYVLNST-GRHNMDDLAERYLGHHTIAFEDIAGKGKNQLTFDQIELKKAAEYAAEDADV 542 Query: 505 TLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLA 564 T++LH +W ++ + + +++ +E+PLV VLSRIERNGV ID + L S+E + +L Sbjct: 543 TMKLHQTLWREVAQSPELVKLYQEMELPLVSVLSRIERNGVLIDSRALLAQSKEFSQKLT 602 Query: 565 ELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLP 624 LE KAHE+AG+ FNL+STKQLQ ILF+K G+ LKKTP GAPST+EEVLEELA ++ LP Sbjct: 603 ALENKAHELAGQHFNLASTKQLQEILFDKLGLPVLKKTPKGAPSTNEEVLEELAYEHELP 662 Query: 625 KVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNE 684 K+++E+RGL+KLKSTYTDKLP M+N KTGRVHTSYHQAVTATGRLSS+DPNLQNIPVRNE Sbjct: 663 KLLVEHRGLSKLKSTYTDKLPQMVNRKTGRVHTSYHQAVTATGRLSSSDPNLQNIPVRNE 722 Query: 685 EGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGL 744 EGRRIRQAFIA + + +++ADYSQIELRIMAHLS DKGL AF+EGKDIHR+TAAE+FGL Sbjct: 723 EGRRIRQAFIARKGFKVIAADYSQIELRIMAHLSADKGLTAAFSEGKDIHRSTAAEIFGL 782 Query: 745 PLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMER 804 LE VT+EQRRSAKAINFGLIYGMS+FGL+RQL I R +AQ+YMDLYF+RYPGV +M Sbjct: 783 ALENVTAEQRRSAKAINFGLIYGMSSFGLSRQLGIARGDAQRYMDLYFQRYPGVQTFMTN 842 Query: 805 TRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVD 864 R +AK QGYVETL GRRLYLPDI+S+N RR AAER AINAPMQGTAADIIKRAMI +D Sbjct: 843 IREKAKSQGYVETLFGRRLYLPDIQSANAMRRKAAERVAINAPMQGTAADIIKRAMIDID 902 Query: 865 AWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 + + P + MIMQVHDELVFEV +D ++ + I LMEN +L VPL+V+VG G+NW Sbjct: 903 KAI-TDDPDILMIMQVHDELVFEVKEDKIEHYSALIKSLMENAAQLHVPLIVDVGVGDNW 961 Query: 925 DQAH 928 D+AH Sbjct: 962 DEAH 965 >UniRef50_Q9HT80 DNA polymerase I n=9 Tax=Gammaproteobacteria RepID=DPO1_PSEAE Length = 913 Score = 1126 bits (2912), Expect = 0.0, Method: Compositional matrix adjust. Identities = 575/929 (61%), Positives = 698/929 (75%), Gaps = 20/929 (2%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + Q PL+LVDGSSYLYRA+HA PPLT S G+PTGA+ GVLNML SL QY + AVVFD Sbjct: 1 MSQAPLVLVDGSSYLYRAFHALPPLTTSTGKPTGAVKGVLNMLLSLRKQYPDSPFAVVFD 60 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 AKG TFRDELF YK++RP MPDDLR Q+EPLHA V+A+GLPLL V GVEADDVIGTLAR Sbjct: 61 AKGPTFRDELFAEYKANRPSMPDDLRVQVEPLHASVRALGLPLLCVEGVEADDVIGTLAR 120 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALM 183 + A RPV+ISTGDKDMAQLV +ITL+NTMT + L + V K+GV PELIIDFLALM Sbjct: 121 SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSRLDVDGVKEKFGVGPELIIDFLALM 180 Query: 184 GDSSDNIPGVPGVGEKTAQALLQGLGGL-DTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 GD DNIPGVPGVGEKTA LL G+GG + LYA +K+ L RGAK + AKLE+N+E Sbjct: 181 GDKVDNIPGVPGVGEKTALGLLTGVGGGLEVLYASLDKVPELPIRGAKGLPAKLEENREQ 240 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A+LSYQLATIKTDVEL++ ++L +P E L+ L+++ EFK W D+ Sbjct: 241 AFLSYQLATIKTDVELDVEIDKLYPGEPQREALIALYRELEFKNWLDDL----------- 289 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 +E A E E + + +Y +LD+ AW+ KLE+A + AFDTET S+D Sbjct: 290 -----LREAKEAGENGEAETPIQAEVDYDVVLDQAGFDAWLKKLEEAELIAFDTETTSID 344 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 A +VG+SFA++ G AAY+P+AH Y+ P+Q+ R+ L LKPLLED K LKVGQ+ K Sbjct: 345 AQQAQVVGVSFAVKEGEAAYVPLAHSYMGVPEQLDRDAVLRALKPLLEDPKKLKVGQHAK 404 Query: 423 YDRGILANYG--IELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG 480 YD +LAN I LRG+A+DTMLESY+L+S A RHDMDSLA ++L H TI FE+IAGKG Sbjct: 405 YDINVLANASTPIALRGVAYDTMLESYVLDSTATRHDMDSLALKYLGHSTIRFEDIAGKG 464 Query: 481 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI 540 QLTF+QIA+E+AG YAAEDADVTL+LH +W L+ V +IEMPLVPVL+RI Sbjct: 465 AKQLTFDQIAIEQAGPYAAEDADVTLRLHQALWQKLEAIPSLARVLTDIEMPLVPVLARI 524 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK 600 ERNG +D +L S EL ++ LE++A+++AG+EFNL S KQL IL++K G+ L Sbjct: 525 ERNGALVDANLLGIQSRELGEKMVALERQAYDLAGQEFNLGSPKQLGAILYDKLGLPVLS 584 Query: 601 KTPGGAPSTSEEVLEELA-LDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 KT G PST+E VL ELA D+ LPKVI++YR ++KLKSTYTD+LP INP+TGR+HTSY Sbjct: 585 KTATGQPSTAEAVLAELAEQDFELPKVIMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSY 644 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSR 719 HQAV ATGRLSS+DPNLQNIP+R EGRRIRQAF+AP+ Y +++ADYSQIELRIMAHL++ Sbjct: 645 HQAVAATGRLSSSDPNLQNIPIRTAEGRRIRQAFVAPQGYKLLAADYSQIELRIMAHLAK 704 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 D GLL AF D+HRATAAEVFG+PLE V+ +QRRSAKAINFGLIYGMSAFGLA+Q+ + Sbjct: 705 DDGLLDAFRHDLDVHRATAAEVFGVPLEDVSGDQRRSAKAINFGLIYGMSAFGLAKQIGV 764 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 RKEAQ Y+D YF RYPGVL YMERTRAQA EQG+VETL GRRLYLP+I S NGA R AA Sbjct: 765 ERKEAQAYIDRYFARYPGVLAYMERTRAQAAEQGFVETLFGRRLYLPEIHSKNGAMRKAA 824 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 ER AINAPMQGTAADI+KRAM+AVD WLQ R+I+QVHDELV EV +D V+ V + Sbjct: 825 ERTAINAPMQGTAADIMKRAMVAVDNWLQESGLDARVILQVHDELVLEVREDLVEQVCEG 884 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWDQAH 928 I LM LDVPL+VE G G NWD+AH Sbjct: 885 IRPLMSGAATLDVPLVVEAGVGSNWDEAH 913 >UniRef50_A9ITV6 DNA polymerase I n=89 Tax=Proteobacteria RepID=A9ITV6_BORPD Length = 948 Score = 929 bits (2401), Expect = 0.0, Method: Compositional matrix adjust. Identities = 478/930 (51%), Positives = 631/930 (67%), Gaps = 39/930 (4%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 L+LVDGSSYLYRA+HA P L N+ GEPTGA+YGV+NMLR L+ +K +AA +FDA+GKT Sbjct: 48 LLLVDGSSYLYRAFHAMPDLRNAQGEPTGALYGVVNMLRKLVSDHKADYAACIFDARGKT 107 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FRD+L+ YKSHRPPMP+DL AQIEP+H V+A+G +LA+ GVEADD+IGTLA +A Sbjct: 108 FRDDLYPDYKSHRPPMPEDLAAQIEPIHQAVRALGWQVLAIEGVEADDIIGTLACQASGM 167 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSD 188 G ++STGDKD+AQLV N+TL+NTM+ +L V NK+GVPP+ I+D+L L+GD+ D Sbjct: 168 GIRTIVSTGDKDLAQLVDANVTLVNTMSGEVLDETGVRNKFGVPPDRIVDYLMLVGDAID 227 Query: 189 NIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQ 248 N+PGV VG KTA L G +D+L + + I G++ + + L+ Q Sbjct: 228 NVPGVAKVGPKTAAKWLAEFGSIDSLVEQADGIKGVAGNNLREAIGQFP-------LTRQ 280 Query: 249 LATIKTDVELEL---TCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPA 305 L T+K D +L + L +QP + L L+++Y F+ W ++ Sbjct: 281 LLTVKCDCDLAGHIGGIDDLAPRQPDTDTLQALYERYGFRTWLREL-------------- 326 Query: 306 AKPQETSVADEAPEVTATVISYD-------NYVTILDEETLKAWIAKLEKAPVFAFDTET 358 T + P+ A VI+ Y+ I W+A+ P+ A DTET Sbjct: 327 -----TGDSQRVPQGDARVIAEAPAAPAELRYLIISSWPAFDEWMAQAADTPLVALDTET 381 Query: 359 DSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVG 418 SLD + A+LVG+S A+ PGVA YIP+AH D+ +Q+ + LE ++ L+D K+ Sbjct: 382 TSLDEMQASLVGISMALAPGVACYIPLAHRGPDSAEQLPKREVLERMRAWLQDPARPKLL 441 Query: 419 QNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAG 478 + KYD + AN G+ L GI DTML++Y+L S G ++ LA+R+L IT+EE+ G Sbjct: 442 HHAKYDAHVFANEGVALAGIQDDTMLQAYVLESHRGV-GLNDLAQRYLGRGGITYEELCG 500 Query: 479 KGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLS 538 KG Q+ F+++A+E+AG YA EDAD TLQLH + P + G +++ +E+ + VL+ Sbjct: 501 KGAKQIGFDEVAVEQAGHYACEDADFTLQLHHALRPRVAADAGLERIYQ-LEIQVSRVLT 559 Query: 539 RIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKP 598 +ERNGVK+D L S L + +LE++A+E+AG+ FNL+S KQL ILF + + Sbjct: 560 VVERNGVKVDAAELGRQSHRLGQEMLQLEQRAYELAGQPFNLNSPKQLGEILFGRMQLPV 619 Query: 599 LKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTS 658 ++KT GGAPST EEVL LA DYPLP+V+LEYRGL+KLKSTYTDKLP MIN +TGRVHT Sbjct: 620 VRKTAGGAPSTDEEVLTRLAQDYPLPQVLLEYRGLSKLKSTYTDKLPRMINARTGRVHTH 679 Query: 659 YHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLS 718 Y QA TGRL+S+DPNLQNIPVR E GRR+R+AF+A E V+VSADYSQIELRIMAH+S Sbjct: 680 YSQAAVVTGRLASSDPNLQNIPVRTEAGRRVREAFVA-EHGVLVSADYSQIELRIMAHVS 738 Query: 719 RDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLN 778 D L AFA GKDIHRATA+E+FG+ L+ V ++QRR+AKAINFGLIYGM FGLA L Sbjct: 739 DDANLQQAFAAGKDIHRATASEIFGVALDEVGADQRRAAKAINFGLIYGMGVFGLASNLG 798 Query: 779 IPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAA 838 I R AQ Y+D YF RYPGV +YME TR A++QGYVET+ GRRL LPDI++++G RR Sbjct: 799 ITRDAAQAYIDRYFARYPGVAQYMEHTRQLARQQGYVETVFGRRLQLPDIRAASGPRRQG 858 Query: 839 AERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAK 898 AERAAINAPMQGTAAD+IK AM+AV WL AE+ RMIMQVHDEL+ EV ++DAV Sbjct: 859 AERAAINAPMQGTAADLIKMAMVAVQDWLDAERLATRMIMQVHDELILEVPDGELDAVRA 918 Query: 899 QIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 ++ +LM RL VPL+ EVG G NW+QAH Sbjct: 919 RLPELMCGVARLRVPLVAEVGVGPNWEQAH 948 >UniRef50_Q7VRJ4 DNA polymerase I n=3 Tax=Enterobacteriaceae RepID=Q7VRJ4_BLOFL Length = 943 Score = 919 bits (2374), Expect = 0.0, Method: Compositional matrix adjust. Identities = 451/937 (48%), Positives = 627/937 (66%), Gaps = 15/937 (1%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 NP+ILVDGS Y+YRAYHA+PPLT G+P +YGV++M++SLI +Y+P+H AV+FD Sbjct: 8 HNPIILVDGSFYMYRAYHAYPPLTTQNGQPVWVIYGVISMIKSLITRYQPSHMAVIFDVS 67 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 GKTFRD+LF+ YKS+R +PDDL QI P H ++KAMG+ +L + VEADDVI TLA Sbjct: 68 GKTFRDDLFKQYKSNRIKIPDDLSIQIIPTHKIIKAMGISVLNIPNVEADDVIATLATFY 127 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185 + + VLISTGDKDMAQ+V+ NI LINTM+N +L P EV K+GVPP LI D+LAL+GD Sbjct: 128 AQLNKTVLISTGDKDMAQIVSSNIILINTMSNIMLNPTEVEKKFGVPPTLIADYLALVGD 187 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 +DNIPGVPG+G+KTAQ +L +G L+ LY I L+ RG K + L NKE+A+L Sbjct: 188 RADNIPGVPGIGKKTAQIVLNQIGNLNILYQNLNNILQLNIRGRKKIYQALLINKELAFL 247 Query: 246 SYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKW-----LQAK 300 Y+LATIK DV L+ + +L +Q+ ++L+ LF +YEF W D+++GKW + K Sbjct: 248 CYKLATIKIDVPLQESDYKLLIQEINTQDLILLFTQYEFNTWLTDLQSGKWNNTNKYEKK 307 Query: 301 GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDS 360 A + + ++ ++ I + TLK WI + + +D+ Sbjct: 308 IISTAYTKHANTKIIQNSSYNNLKLNNNSNYIIYNTATLKHWIKQNYHKNHLILNIHSDN 367 Query: 361 LDNISANLVGLS---FAIEPGVAAYIPVAHDYLDAPDQISRERALEL------LKPLLED 411 + +AN++GL + I YIP++++ + P+Q + + L L L+P+LE+ Sbjct: 368 SNIFTANILGLCLSLYNIYINQYIYIPISNN-IQIPNQYNNKNYLSLKNVLLNLQPILEN 426 Query: 412 EKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTI 471 +K+GQN+K++ +L + I L G FD +LE YIL ++ + + + Sbjct: 427 PAVVKIGQNMKFNYSLLKRHNINLSGKIFDVILEFYILYGTTNYQNIKRFLNKETFNSIL 486 Query: 472 TFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEM 531 F++ N + + + YA + LH +WP L + +F+ IE+ Sbjct: 487 NFQQSYDNYNNYIVKEIKNIYQESLYAIQLILAIFDLHQILWPQLYSNDKLKKIFQEIEI 546 Query: 532 PLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILF 591 PL+ +L+ IE GV ID +L ++S EL + L L+ +A+++AG FNL S KQLQ IL+ Sbjct: 547 PLISILAHIESYGVLIDKTLLCSYSMELNVHLNTLQNQAYQLAGTSFNLDSIKQLQEILY 606 Query: 592 EKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPK 651 +KQ + LKKTP G+PST+EEVL++L+ YP+PK+IL+YR L+KLKSTYT+KL M+N + Sbjct: 607 KKQKLPILKKTPSGSPSTNEEVLKKLSHKYPIPKIILKYRSLSKLKSTYTNKLISMVNTE 666 Query: 652 TGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIEL 711 + R+HTSY+Q TATGRLSS +PNLQNIP RN +GR+IRQAFIAP VIVSADYSQIEL Sbjct: 667 SNRIHTSYNQTRTATGRLSSANPNLQNIPNRNHDGRKIRQAFIAPSHSVIVSADYSQIEL 726 Query: 712 RIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAF 771 RIMAHLSRD L+ F GKDIH TA+E+F L VT+EQR AK INFGLIYGMSAF Sbjct: 727 RIMAHLSRDFKLINDFLSGKDIHTTTASEIFVTSLNLVTNEQRHQAKTINFGLIYGMSAF 786 Query: 772 GLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSS 831 GL++QL++ EAQKY+D YF+RYPGV++Y++ + + GYV TL+GR+LYLP+I S Sbjct: 787 GLSKQLSVTCYEAQKYVDRYFQRYPGVMQYIQHIKDNVYKYGYVSTLEGRKLYLPNIYSK 846 Query: 832 NGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKD 891 N +++ AERAAINAPMQG+AADIIK+AMI+++ WL+ + V+MIMQVHDELVFEV + Sbjct: 847 NLSKKKGAERAAINAPMQGSAADIIKKAMISINYWLKQDDIPVQMIMQVHDELVFEVQNN 906 Query: 892 DVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 +D KQI +LME C LDVPL V++G G+NW+QAH Sbjct: 907 FIDTAIKQIKKLMEECFILDVPLKVDIGVGKNWEQAH 943 >UniRef50_Q21YU4 DNA polymerase I n=39 Tax=Betaproteobacteria RepID=Q21YU4_RHOFD Length = 957 Score = 906 bits (2341), Expect = 0.0, Method: Compositional matrix adjust. Identities = 489/959 (50%), Positives = 635/959 (66%), Gaps = 45/959 (4%) Query: 5 PQNP--LILVDGSSYLYRAYHAFPPLTNSAGEP----TGAMYGVLNMLRSLIMQYKPTHA 58 P P L+LVDGSSYLYRA+HA P L G+P TGA+ G++NML+SL + +A Sbjct: 9 PAKPKTLLLVDGSSYLYRAFHAMPDLRAVPGDPSSAPTGAIRGMINMLQSLRKEVPADYA 68 Query: 59 AVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVI 118 A +FD KG TFRD L+ YK+HR PMPDDLR+QIEP+H +V+ MG +LAV GVEADDVI Sbjct: 69 ACIFDDKGPTFRDALYPEYKAHRSPMPDDLRSQIEPIHEVVRLMGWKVLAVPGVEADDVI 128 Query: 119 GTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIID 178 GTLA A + G V++S+GDKD+AQLV +IT+I+TM V ++GVPP+L++D Sbjct: 129 GTLAVTAARQGIEVIVSSGDKDLAQLVNSHITIIDTMNGRRRDVAGVEAEFGVPPQLMVD 188 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 F L+GD DN+PGVP VG KTA LQ G LD + A ++I G+ + L++ Sbjct: 189 FQTLVGDVIDNVPGVPKVGPKTAAKWLQEYGSLDAVVANADQIKGV-------VGENLKK 241 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLG------LFKKYEFKRWTADVE 292 + + L QL TIKTD +L+ L A + ++KY FK + Sbjct: 242 SLDWLPLGRQLLTIKTDCDLDGWMPDLPALDSIATGTMDTGALAIFYEKYGFKGLARTLG 301 Query: 293 AG----------------KWLQAKGAKPAAKPQ---ETSVADEAPEVTA----TVISYDN 329 G K G+ P + Q E + DE PE + + ++ + Sbjct: 302 GGAASVASKASSGFGVGPKERSDAGSDPNSVRQLTREPGLFDE-PEAASDPIPSSVTNLH 360 Query: 330 YVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDY 389 Y TIL E W+AK++ A + A DTET SLD + A +VG+SF++ PG AAYIP+AH Y Sbjct: 361 YDTILTWEAFDRWLAKVQAADLVALDTETTSLDEMRAQIVGISFSVTPGEAAYIPLAHAY 420 Query: 390 LDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYIL 449 DAP Q+ L LKP L+D K+GQ++KYDR + AN+GIE++G A DTML+SY+L Sbjct: 421 PDAPAQLPLADVLAKLKPWLQDASHKKLGQHVKYDRHVFANHGIEVQGYAHDTMLQSYVL 480 Query: 450 NSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLH 509 V H + SLAER L I+FE++ GKG NQ+ F+Q+ + +A +Y+ ED+D+TL +H Sbjct: 481 E-VTKPHGLASLAERHLGRSGISFEDLCGKGANQICFDQVDIAQAAQYSCEDSDMTLDVH 539 Query: 510 LKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKK 569 +WP LQ + ++E +E+ L RIERNGV ID L S EL R+ +LEK+ Sbjct: 540 RALWPLLQANDKLRFIYE-LEIASSEALYRIERNGVLIDGPTLAVQSHELGQRILQLEKE 598 Query: 570 AHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILE 629 AHE+AG+ FNLSS KQ+ I F K G+ +KKTP G+PST +EVL++LA DYPLP ILE Sbjct: 599 AHELAGQPFNLSSPKQIAEIFFTKLGLPVVKKTPTGSPSTDDEVLQKLAEDYPLPAKILE 658 Query: 630 YRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRI 689 +RGLAKLK TYTDKL + +P+TGRVHT Y QA+ TGRLSS +PNLQNIPVR EGRR+ Sbjct: 659 HRGLAKLKGTYTDKLAQLAHPRTGRVHTHYAQAIAVTGRLSSLEPNLQNIPVRTPEGRRV 718 Query: 690 RQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETV 749 R+AF+AP VI SADYSQIELRIMAH+S D LL AF +G D+HRATA+E+FG+ V Sbjct: 719 REAFVAPPGSVIASADYSQIELRIMAHISGDAALLLAFHDGIDVHRATASEIFGVDRAQV 778 Query: 750 TSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQA 809 TSEQRR AK INFGLIYGMSA+GLA+ L+I A+ Y++ YF+RYPGV YME TRA A Sbjct: 779 TSEQRRYAKVINFGLIYGMSAYGLAKALSIDNTAAKNYIERYFDRYPGVKNYMEHTRALA 838 Query: 810 KEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQA 869 K QGYVET+ GRRLYLP+I S NG RR+ AERAAINAPMQGTAAD+IK +M+ V + Sbjct: 839 KRQGYVETVFGRRLYLPEINSPNGPRRSGAERAAINAPMQGTAADLIKLSMVKVQQVIDE 898 Query: 870 EQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 E+ +MIMQVHDELVFEV + ++D V ++ +LM L VPLL EVG G NWD+AH Sbjct: 899 EKRATKMIMQVHDELVFEVPESEIDWVRHEVPRLMAGVAHLKVPLLAEVGVGANWDKAH 957 >UniRef50_A5EWG4 DNA polymerase I n=10 Tax=Gammaproteobacteria RepID=A5EWG4_DICNV Length = 901 Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust. Identities = 468/928 (50%), Positives = 598/928 (64%), Gaps = 43/928 (4%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 ++LVDGSSYL+RA++A PPLT G PTGAM+GV+ ML L Y+P + AVVFDA GKT Sbjct: 8 VVLVDGSSYLFRAFYALPPLTTQKGHPTGAMHGVIKMLMRLYDDYQPNYFAVVFDAAGKT 67 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR +++ YK++RPPMP+DL QI+PLH ++ A+G PL+ SGVEADDVIGTLAR+A Sbjct: 68 FRHQIYPDYKANRPPMPEDLAVQIQPLHQLITALGFPLIMESGVEADDVIGTLARQALAE 127 Query: 129 GRPVLISTGDKDMAQLVT-PNITLINTMTNTILGPEEVVNKYGV---PPELIIDFLALMG 184 V+IS+GDKDM QL+T +ITL++TM N + +V ++ + +IDFLAL+G Sbjct: 128 DYQVIISSGDKDMTQLLTHADITLLDTMKNETITASDVAKRFKIEQLTAAQVIDFLALVG 187 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 D SDNIPGV VG KTA+ L G LD + +KI G + + A L Q K Sbjct: 188 DKSDNIPGVEKVGAKTAEKWLATYGSLDAIIENADKIRG---KVGDNLRAGLAQLK---- 240 Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304 S QLATI ++L L +L L +YE D++ ++L+ Sbjct: 241 CSQQLATINQTLDLPYRIADLARGAENPHKLAALCAQYELN----DIQ-NRYLKTTAV-- 293 Query: 305 AAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNI 364 A +APE +Y I A KL + F FD ETDSL+ + Sbjct: 294 --------AAPKAPEKL-------HYHLIQTIAECNALCEKLAQKSAFVFDVETDSLNYM 338 Query: 365 SANLVGLSFAIEPGVAAYIPVAH-DYLDAPDQISRERALELLKPLLEDEKALKVGQNLKY 423 A+ VG+SFA+E G A Y+P+ H + ++ P L LK L E+ K+GQ+LK+ Sbjct: 339 QAHWVGISFAVEAGEAWYLPLVHQNGINLP----FAETLAALKNLFENASIRKIGQHLKF 394 Query: 424 DRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQ 483 DR ILA YGI L G+ DTML SY NS A RH+MD LA+ +L +TI FE+IAG G Q Sbjct: 395 DRHILARYGISLNGVIDDTMLMSYCYNSTATRHNMDDLADFYLNKQTIRFEDIAGSGAKQ 454 Query: 484 LTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERN 543 F++I LE A +YA EDAD+TLQL+ L ++EN+E PL +L +E Sbjct: 455 RRFDEIDLETAMQYACEDADITLQLYQFFQQKLASEPTLQALYENVERPLAEILWAMEHQ 514 Query: 544 GVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTP 603 GVKI L S+EL +L L+K+A+++AG FNL S KQLQ ILFE+ + + KTP Sbjct: 515 GVKIAGDKLAVQSQELAAQLKTLQKQAYQLAGGVFNLDSPKQLQEILFERLALPVIHKTP 574 Query: 604 GGAPSTSEEVLEELA--LDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 G ST+EEVL++LA LP++IL YR L KLKSTYTDKLP +I+P + RVHTSYHQ Sbjct: 575 TGQASTNEEVLQKLAELRQSALPEIILNYRALGKLKSTYTDKLPELIDPDSKRVHTSYHQ 634 Query: 662 AVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDK 721 AVT+TGRLSS+DPNLQNIP+R++EGRRIRQAFIA E Y I++ADYSQIELRIMAHLS+D+ Sbjct: 635 AVTSTGRLSSSDPNLQNIPIRSDEGRRIRQAFIAEEGYSILAADYSQIELRIMAHLSQDE 694 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 L AF +DIH ATAAE+F + E V QRR AKAINFGLIYGMSAFGLARQLNI R Sbjct: 695 RLQRAFQLQQDIHTATAAELFSVAPEAVDRNQRRDAKAINFGLIYGMSAFGLARQLNISR 754 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 +A +Y+D YF RYP VL YM+ R A++QGYV TL GRRLY+PDI + N RR AAER Sbjct: 755 TQAAEYIDKYFHRYPQVLAYMDSARQTAQQQGYVSTLLGRRLYIPDIHNKNMQRRRAAER 814 Query: 842 AAINAPMQGTAADIIKRAMIAVDAW-LQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 AINAPMQG+AADIIK AM V W Q R++MQVHDELVFEV +D +I Sbjct: 815 LAINAPMQGSAADIIKLAM--VQFWQTYGAQKECRLLMQVHDELVFEVATAALDIWQPRI 872 Query: 901 HQLMENCTRLDVPLLVEVGSGENWDQAH 928 +ME+ L VPL+V+ G ++WD AH Sbjct: 873 THIMEHALPLSVPLIVDCGVSKDWDGAH 900 >UniRef50_Q1QDQ1 DNA polymerase I n=24 Tax=cellular organisms RepID=Q1QDQ1_PSYCK Length = 988 Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust. Identities = 463/963 (48%), Positives = 601/963 (62%), Gaps = 52/963 (5%) Query: 6 QNPLILVDGSSYLYRAYHAFP-PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 Q P ILVDGS YL+R YHA P + NS G T A+ G LN L L+ +Y PTH AV FD Sbjct: 38 QPPFILVDGSYYLFRTYHALPKTMQNSQGLVTNAIRGTLNALLKLMRRYHPTHMAVCFDT 97 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 K TFR + E YK++RP M +L QI +H +V A+G+PLL + G EADD+IGTLA Sbjct: 98 KSPTFRHAMSEEYKANRPKMDIELAEQIPYIHRLVTALGIPLLRIEGAEADDIIGTLAYR 157 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMG 184 A G V+ISTGDKDM QL+ + L ++ T + VV K+G+ PE +IDFL LMG Sbjct: 158 AVAEGHHVVISTGDKDMMQLINDCVILEDSFTGKMTDSAGVVEKFGINPEQMIDFLTLMG 217 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 DSSD I GVPG+G+KTA+ LL G +D + + +A + R K + LE ++ Sbjct: 218 DSSDGIKGVPGIGKKTAKDLLNEYGNIDNML---KNVANIKGRAGKNL---LEYADDIP- 270 Query: 245 LSYQLATIKTDVELELTCEQLEVQ-QPAAE--ELLGLFKKYEFKRWTADVE--------A 293 ++ QLATI TD+E+ + L++ P A EL L+ + EF+ A ++ Sbjct: 271 MNAQLATIVTDLEVGQDWQDLKINTDPCAHINELRELYSELEFRNELASLDHPNHPANGN 330 Query: 294 GKWLQAKGAKPAAKPQETSVADEAP-----EVTATVISYDNYVTILDEETLKAWIAKLEK 348 G Q+ A + +A ++T + I + TILDE + L Sbjct: 331 GHGTQSVAHSQADAESQAQIAKSLQSSTIGDITDSKIHDRAWHTILDESAFDNLVQLLAS 390 Query: 349 APVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAH----DYLDAPDQISRERALEL 404 AP F DTET S+ A LVGLSFA++ A YIP+ H D L A Q+ R+ L Sbjct: 391 APHFVIDTETTSVYWRQAELVGLSFAVQAHEAYYIPLTHALEGDELIAK-QLDRDTVLAR 449 Query: 405 LKPLLEDEKALKVGQNLKYDRGILANYGIELRG--------IAFDTMLESYILNSVAGRH 456 LKP+LE+ K+GQ+LKYD IL+ Y I L G A DTML SY++N+ RH Sbjct: 450 LKPILENPNIGKIGQHLKYDAHILSLYDINLLGNIHDKPNNWAMDTMLASYVINAAITRH 509 Query: 457 DMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDL 516 MD LA +L+ +TI+FE++AGKG Q++F+Q+A++ A YA EDAD+T QL L Sbjct: 510 GMDDLARHYLQTQTISFEDVAGKGAKQVSFDQVAIDIASDYACEDADITYQLFDLFSKKL 569 Query: 517 QKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGE 576 + +E+P +L ++E NG+ I L+ S+ + LEK+A+E+AGE Sbjct: 570 ADDTNNAKLLHELEIPTAEILCQMEANGILIRRPFLNELSKRFDEEIIALEKRAYEVAGE 629 Query: 577 EFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKL 636 EFNL S KQL +LF+K G+ KKT G ST E VL ++ D+PL + LEYRGL+KL Sbjct: 630 EFNLGSPKQLGEMLFDKLGVVGGKKTKTGQYSTGEAVLSKI--DHPLVDITLEYRGLSKL 687 Query: 637 KSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP 696 KSTYTD L + + KT RVHTSYHQA+T+TGRLSSTDPNLQNIP+R GR IRQAFIAP Sbjct: 688 KSTYTDALDNVADAKTDRVHTSYHQALTSTGRLSSTDPNLQNIPIRTATGRLIRQAFIAP 747 Query: 697 EDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRS 756 E VI++ADYSQIELR+MAH S DK L AF EG DIH ATAAEV G + VT+ +RR+ Sbjct: 748 EGRVILAADYSQIELRLMAHFSGDKNLTHAFNEGLDIHAATAAEVLGKEVAEVTATERRN 807 Query: 757 AKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVE 816 AKAINFGL+YGMSAFGLA+QL + R EAQ Y+D+YFERYPGV +YM TRA A E GY+E Sbjct: 808 AKAINFGLLYGMSAFGLAKQLQMSRSEAQDYIDMYFERYPGVKDYMINTRASAYEHGYIE 867 Query: 817 TLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRM 876 T+ GR+LY PDI SN + AERAAINAP+QG+AAD+IK AMIAVD L EQ +M Sbjct: 868 TILGRKLYTPDINHSNRMVKQGAERAAINAPLQGSAADLIKLAMIAVDKVLPKEQ--AKM 925 Query: 877 IMQVHDELVFEVHKDDVDAVAKQIHQLMENC-----------TRLDVPLLVEVGSGENWD 925 ++QVHDELVFEV D VD +++ I M++ VPLLVE SG+NWD Sbjct: 926 LLQVHDELVFEVDADKVDEISQLITNAMQDVLTATAVEKGWNVNFAVPLLVETDSGQNWD 985 Query: 926 QAH 928 +AH Sbjct: 986 EAH 988 >UniRef50_Q0F0N6 DNA polymerase I n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0N6_9PROT Length = 917 Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust. Identities = 455/934 (48%), Positives = 589/934 (63%), Gaps = 36/934 (3%) Query: 9 LILVDGSSYLYRAYHAF-PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 L+L+DG +Y++RA+HA LTNS GEPT A++G + MLRS++ + PTH AV FD KG Sbjct: 4 LVLIDGPNYVFRAFHAVRHNLTNSKGEPTNAVFGYVQMLRSILKELGPTHVAVAFDPKGG 63 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 TFR+ ++ YK+HRPPMP+DL AQ + + A L + V EADDVI TLAR+AE Sbjct: 64 TFRNRMYADYKAHRPPMPEDLAAQWPSIFDVTDAFRLNRICVEDYEADDVIATLARQAEA 123 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSS 187 G V I + DKD+ QLV I +++TM GPEEV ++GV P+ I D LAL GDS+ Sbjct: 124 RGWDVSIVSTDKDLMQLVGERIWMLDTMKRKDYGPEEVKERWGVGPDRIQDLLALAGDSA 183 Query: 188 DNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK------- 240 DNIPGVPG+G KTA LL+ G L+ G T A +++Q K Sbjct: 184 DNIPGVPGIGPKTAVTLLEAYGDLE---------------GVLTRAGEIKQQKRRENLIE 228 Query: 241 --EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 + A LSY+L + V L + + L V +P E L LF + EF+R A+ + Sbjct: 229 FADDARLSYRLVALDEQVPLPIELDDLAVTEPDRERLAELFTRLEFRRMLAEFSGPAAID 288 Query: 299 AKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTET 358 P AKP E VT + D V DE TL++ +A+L A + A DTET Sbjct: 289 TP-VVPQAKPAEPVRTSTPATVTPRI---DRLVN--DETTLQSLLAELSSAELIALDTET 342 Query: 359 DSLDNISANLVGLSFAIEPGVAAYIPVAHDYLD----APDQISRERALELLKPLLEDEKA 414 SL A LVGLSFA G A YIPV H D AP Q+ + L LKPLLED Sbjct: 343 TSLQAHDAELVGLSFATRAGEAWYIPVGHRSTDLLVPAPQQLPLQHVLAALKPLLEDAAK 402 Query: 415 LKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFE 474 K G NLKYD +L GIEL GIA D+ML +Y L +DS+AE +L + + Sbjct: 403 RKCGHNLKYDAQVLRRAGIELAGIAADSMLLAYCLYPAKYPPSLDSVAEDYLNYHCTPYS 462 Query: 475 EIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLV 534 E+AGKG Q+ F+++ + A YA EDAD+ L+L + L +G L + IE+PL Sbjct: 463 EVAGKGAKQVCFDEVPVSIATPYACEDADIALRLTGLLSAQLLT-EGRLTRHDEIELPLS 521 Query: 535 PVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQ 594 VL+ IE G +D ++L S LR+AELE + H AGE+FN+ S KQL +LFE Sbjct: 522 QVLADIEWTGAHVDAEMLAGLSTGFGLRIAELESQIHAAAGEKFNIQSPKQLGVLLFETL 581 Query: 595 GIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGR 654 I KKT G +T +EVLE+LA ++ +P++IL+ R LAKLKSTYTD LP +I+ TGR Sbjct: 582 AIPGGKKTKSGQWATGQEVLEKLADEHEVPRLILQVRQLAKLKSTYTDALPKLIHRTTGR 641 Query: 655 VHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIM 714 VHTS++QA+T TGRLSS+DPNLQNIP+R+ EGR IR+AFIA E + +++ADYSQIELR+M Sbjct: 642 VHTSFNQAITTTGRLSSSDPNLQNIPIRSAEGREIRKAFIAEEGHTLLAADYSQIELRLM 701 Query: 715 AHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLA 774 AH S D L AFA G+DIH ATAA V G+ LE V+ E RR AKAINFG++YGMSAFGLA Sbjct: 702 AHFSGDAALCAAFANGEDIHAATAAAVNGIALEDVSGEMRRRAKAINFGILYGMSAFGLA 761 Query: 775 RQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGA 834 +QLNI R EAQ ++D YFERYP V +M+ T A+EQGYVETL G R+Y+P+I SSNG Sbjct: 762 KQLNISRGEAQTFIDTYFERYPSVRGFMDDTLVLAREQGYVETLLGHRVYVPEISSSNGM 821 Query: 835 RRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVD 894 RRA AER AINAP+QG+AADIIK AMI + L+ E P +I+QVHDEL+ E D +D Sbjct: 822 RRAYAERTAINAPLQGSAADIIKVAMIHLHRRLRQEAPAAAIILQVHDELIVEAPVDQID 881 Query: 895 AVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 AV+ + Q ME L+VPL V++GSG +W AH Sbjct: 882 AVSAIMRQTMEQAVTLEVPLTVDIGSGHSWYDAH 915 >UniRef50_A5CXW1 DNA polymerase I n=2 Tax=sulfur-oxidizing symbionts RepID=A5CXW1_VESOH Length = 909 Score = 809 bits (2090), Expect = 0.0, Method: Compositional matrix adjust. Identities = 421/926 (45%), Positives = 602/926 (65%), Gaps = 27/926 (2%) Query: 9 LILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 LIL+DGS++L+RAY + LTN G PTGAM+GV+N ++SL +Y+ ++FDA+G Sbjct: 5 LILMDGSAFLFRAYFSTLKQNLTNQNGFPTGAMFGVINAMKSLQRKYQEARIIIIFDARG 64 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 K FR ++ YK++R P+ L QIEPL+ M++AMG+ + VS VEADDVI TL+ A Sbjct: 65 KNFRHNIYPQYKANRKPIDGGLVVQIEPLYEMIQAMGIHFICVSKVEADDVIATLSCCAN 124 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDS 186 + +I++GDKD+ QLV NI+ +N M + + V+ K GV PE I+DFLAL GDS Sbjct: 125 QNNIKTIIASGDKDLMQLVGTNISQLN-MKGVLHDRQSVIEKIGVAPEKILDFLALTGDS 183 Query: 187 SDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLS 246 +DNIPGVP VG KTA LQ +Y++ I + + + KL N ++ LS Sbjct: 184 ADNIPGVPSVGPKTAIKWLQ-------IYSDILGIKENAMQIKGKVGEKLRDNFDLLDLS 236 Query: 247 YQLATIKTDVELELTCEQLEVQQPAA--EELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304 YQL +K DV L C L+ +P ++L L+++Y F W ++ L+ K + Sbjct: 237 YQLVKLKFDVVLP--CNILD-DEPVKNIDKLANLYQQYGFFMWLKQLDNVSVLKQKSIQV 293 Query: 305 AAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNI 364 D + ++ + + +LD + +++L+ F F + SLD + Sbjct: 294 IG-------TDTGVNNSVDILKGYSQILVLDLDIFNTMVSRLKILKTFVFSLKATSLDYM 346 Query: 365 SANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYD 424 +A++VG F I+ + Y+PV HDY+DAP Q++ L LKP+LED K+GQNLKYD Sbjct: 347 NASIVGWVFLIDKD-SFYVPVNHDYIDAPKQLNFNDVLNQLKPILEDVSISKIGQNLKYD 405 Query: 425 RGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQL 484 IL+NY I+L+GI+ D +++SY LNSVA RH+M+ L+E +L ++TI F +I GKGK Q+ Sbjct: 406 AHILSNYKIDLQGISDDVIVKSYCLNSVATRHNMNDLSEYYLNYQTINFVDILGKGKKQV 465 Query: 485 TFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNG 544 TFNQ+ +E A Y E+ +T L+ + ++ ++ + +++N+E+PL+ VL +ERNG Sbjct: 466 TFNQVNVEIALLYVCENVIITSLLNHMLDEEIAQYPRLVKLYQNLELPLIKVLLCMERNG 525 Query: 545 VKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIK--PLKKT 602 V++D +L ++T ++ +++ + E+A FNL S KQ+Q ILFE +G+ PL+KT Sbjct: 526 VELDVNILSTQQLDITQQMEDIKNQVFELADNVFNLESPKQIQRILFESKGLGLIPLRKT 585 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 P G PST+EE L+ LD+P+ +IL YR LAKL STY + LP I+ T R+HTSY+Q Sbjct: 586 PKGVPSTNEEALK--LLDHPVVDLILSYRTLAKLNSTYLEVLPRKIDLNTHRLHTSYNQV 643 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKG 722 VTATGRLSS++PNLQNIP+ +E+G IR AFI + VI+SADYSQIELRIM LS+D+ Sbjct: 644 VTATGRLSSSNPNLQNIPIFSEQGSCIRGAFITGKGNVIISADYSQIELRIMTQLSKDQN 703 Query: 723 LLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRK 782 LL AF KD+H TA+ +F +P++ VTSE RR AKAINFGLIYGMSA+GLA+Q+ + R Sbjct: 704 LLEAFNNDKDVHSETASTMFNIPIDEVTSEYRRRAKAINFGLIYGMSAYGLAKQIGVSRT 763 Query: 783 EAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERA 842 +A++YMD YF+ YP VL YM+ + AK QGYVET+ GRRLYLP I + N + A R Sbjct: 764 KAKQYMDTYFDNYPSVLYYMDNIKEIAKVQGYVETIMGRRLYLPQINAKNKMLQQHALRT 823 Query: 843 AINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQ 902 AINAPMQG++ADIIK++M V W+ + P +RMIMQVHDELVFEV D +++I Sbjct: 824 AINAPMQGSSADIIKKSMFDVYTWIGQDNPDIRMIMQVHDELVFEVSASKADEFSRKIQA 883 Query: 903 LMENCTRLDVPLLVEVGSGENWDQAH 928 LM N LD+PL V+VG G +W +AH Sbjct: 884 LMSNTYLLDIPLKVDVGIGNSWKEAH 909 >UniRef50_A7HP95 DNA polymerase I n=11 Tax=Alphaproteobacteria RepID=A7HP95_PARL1 Length = 979 Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust. Identities = 452/964 (46%), Positives = 619/964 (64%), Gaps = 52/964 (5%) Query: 9 LILVDGSSYLYRAYHAFPPLT-NSAGEPTGAMYGVLNMLRSLIM----QYKPTHAAVVFD 63 L LVDGS Y++RAYHA PPLT S G P GA+ G NML LI +++PTH AV+FD Sbjct: 24 LFLVDGSGYIFRAYHALPPLTRKSDGMPVGAVAGFCNMLYKLIEDTKDEFEPTHLAVIFD 83 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 A KTFR++++ YK++R +DLR Q + +A G+P + G EADD+I T AR Sbjct: 84 AAAKTFRNDIYPEYKANRVEPSEDLRPQFALVRDATRAFGVPCIEKKGYEADDIIATYAR 143 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALM 183 A +AG V I + DKD+ QLV N+ +++TM + E+V+ K+GVPPE ++D AL Sbjct: 144 LAHEAGARVTIVSSDKDLMQLVNDNVDMLDTMKLKTIAREQVIEKFGVPPEKVVDVQALA 203 Query: 184 GDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVA 243 GDS+DN+PGVPG+G KTA L+ G L+TL A +I R L + E A Sbjct: 204 GDSTDNVPGVPGIGIKTAAQLIGEYGDLETLLARAGEIKQQKRR------ENLIEFAEQA 257 Query: 244 YLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEF--------KRWTADVEA-- 293 +S +L + +V LE E + V++P E L+G FK EF +R+ DV+A Sbjct: 258 RISRRLVELDNNVPLEEPLEGMGVREPDPETLIGFFKDMEFNTLTRRVGERFNIDVDAIP 317 Query: 294 --GKW-LQAKGA--KPAA---KPQETSVADEA----PEVTATVISYD----NYVTILDEE 337 GK L GA PA K ++ +VA A P I D NYV + Sbjct: 318 AAGKHALITDGALAAPAGEEPKKEKQTVARTARGGTPGAVPKGIDADFNDANYVAVTALA 377 Query: 338 TLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAH------DYLD 391 L WIA+ + A DTETDSL + A LVG+S ++ PG A YIP+ H D+ D Sbjct: 378 DLDEWIARAREQGFLAVDTETDSLFPMQARLVGVSLSLLPGEACYIPLQHGAGGGLDFAD 437 Query: 392 APDQ--ISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYIL 449 A Q I + A+ LKPLLED LK+GQNLK+D +L +GI+L+G+ DTML SY L Sbjct: 438 AGGQPQIPLKEAIARLKPLLEDPSILKIGQNLKFDMTVLRQHGIQLKGLD-DTMLMSYAL 496 Query: 450 NSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLH 509 ++ H MD L+E L HK I+F E+AGKGK Q+TF+Q+ ++ A YAAEDADVTL+L Sbjct: 497 DAGVHGHGMDELSELHLGHKPISFAEVAGKGKAQITFDQVPVDRATAYAAEDADVTLRLW 556 Query: 510 LKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKK 569 + P L + + V+E +E PLV VL+ +ER GVK+D VL S + + ++A+ E + Sbjct: 557 HILKPRLVAER-RVTVYETLERPLVSVLAEMERAGVKVDKAVLARLSGDFSQKMAQYEDE 615 Query: 570 AHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALD-YPLPKVIL 628 +E+AGE FN+ S KQL ILF+KQ ++ +KT GA ST + LE LA + LP+ +L Sbjct: 616 IYELAGERFNIGSPKQLGEILFDKQSLEGGRKTKTGAWSTDADTLEALAAKGHELPQRVL 675 Query: 629 EYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRR 688 ++RGL+KLKSTYTD LP INP+TGR+HT Y A T+TGRL+ST+PNLQNIPVR E+GR+ Sbjct: 676 DWRGLSKLKSTYTDALPEYINPETGRIHTCYSLASTSTGRLASTEPNLQNIPVRTEDGRK 735 Query: 689 IRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLET 748 IR AF+A + +++SADYSQIELR++AH++ + L AFAEG DIH TA+E+FG+P+E Sbjct: 736 IRTAFVAEKGNLLISADYSQIELRLLAHIADIEALKKAFAEGLDIHAMTASEMFGVPIEG 795 Query: 749 VTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQ 808 + S RR AKAINFG+IYG+SAFGLA QL IPR+EA +Y+D YF+R+PG+ YM+ TR Sbjct: 796 MESSVRRRAKAINFGIIYGISAFGLANQLGIPRQEAGEYIDRYFKRFPGIRAYMDDTRDF 855 Query: 809 AKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQ 868 A + GYVET+ GRR++LP I S N A ++ ERAAINAP+QG+AADII+RAMI + L Sbjct: 856 AHKNGYVETIFGRRIHLPAINSKNPAEKSFMERAAINAPIQGSAADIIRRAMIRMPQALA 915 Query: 869 AEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMEN----CTRLDVPLLVEVGSGENW 924 + RM++QVHDEL+FEV + + + +K + ++M + L VPL V+ + +NW Sbjct: 916 DAKLAARMLLQVHDELIFEVPEKEAEKTSKVVSRIMSDAAAPAVALTVPLDVDARAAKNW 975 Query: 925 DQAH 928 D+AH Sbjct: 976 DEAH 979 >UniRef50_A1ASW3 DNA polymerase I n=12 Tax=Deltaproteobacteria RepID=A1ASW3_PELPD Length = 893 Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust. Identities = 424/925 (45%), Positives = 583/925 (63%), Gaps = 39/925 (4%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 + L LVDGSSY+YRAY+A L++ G PT +YG ML L+ +++P H AVVFD Sbjct: 5 DTLYLVDGSSYIYRAYYAIRHLSSPTGHPTNTIYGFTQMLLKLLKEHQPRHVAVVFDVGR 64 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 +TFR EL+ YK++R +PDDLR Q+ P+ +V+A +P L ++G EADD+IG LA Sbjct: 65 ETFRTELYPDYKANRAALPDDLRVQMGPIRDLVRAFNIPALELAGFEADDIIGCLAARFS 124 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDS 186 G V+I TGDKD+ Q+VT +TL++TM +V+ ++GV P L+ D L L GD+ Sbjct: 125 ATGGRVVIVTGDKDLMQIVTERVTLLDTMKEKRSAITDVIERFGVEPRLVTDILGLAGDA 184 Query: 187 SDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLS 246 SDNIPGVPG+GEKTA L++ G LD L ++ G + KL + ++ A LS Sbjct: 185 SDNIPGVPGIGEKTAMKLIREYGSLDQLLERASEVKGKN-------GEKLREFRDQALLS 237 Query: 247 YQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAA 306 +LATI+ DV +++ E+L Q+P E L LF+ Y F ++ L ++G Sbjct: 238 RRLATIRCDVPIQVELEELASQEPDREALNTLFRLYGFTTLIKELTGRSTLSSEG----- 292 Query: 307 KPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISA 366 Y T+ +E L+ + LE++ FA D ET SLD A Sbjct: 293 -----------------------YCTVTAQEELEELVHALERSEEFAIDLETTSLDPRDA 329 Query: 367 NLVGLSFAIEPGVAAYIPVAH--DYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYD 424 +VGLSF+ A YIPV H D P Q+ R+ LE L+P LE K+GQN+K+D Sbjct: 330 EIVGLSFSFRDHQAWYIPVGHTSDAGLQPGQLPRDLVLERLRPQLESPSPTKIGQNIKFD 389 Query: 425 RGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQL 484 +LA G+ L GI FDTML SY+LN H +D+LA L H+ I++ E+ G GK Q Sbjct: 390 MQVLATNGVSLSGIRFDTMLASYVLNPSRQGHGLDALALEHLGHRMISYAEVTGSGKTQK 449 Query: 485 TFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNG 544 F+Q+ +E A RYA EDAD T LH K P L G +F IEMPLVP+L+ +E +G Sbjct: 450 NFSQVEIETASRYACEDADATWLLHRKFSP-LLAENGVEELFHRIEMPLVPILAGMENHG 508 Query: 545 VKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEK-QGIKPLKKTP 603 V +D ++L + S + + R+A LE + ++AG FNL+S KQL +LFE+ Q K Sbjct: 509 VLLDIRLLADLSRDFSSRMATLEGRIFQLAGTTFNLNSPKQLGEVLFERLQLKTGKKTKG 568 Query: 604 GGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAV 663 ST EVL LA ++ + ++IL+YRGL+KLKSTY+D LP +++P+TGRVHTSY+Q V Sbjct: 569 KTGWSTDNEVLSSLAEEHEIARLILDYRGLSKLKSTYSDALPRLVHPRTGRVHTSYNQTV 628 Query: 664 TATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGL 723 T+TGRLSS+DPNLQNIP+R++EGR IR AFIAP +VI+SADYSQIELR++AHLS D Sbjct: 629 TSTGRLSSSDPNLQNIPIRSDEGRMIRHAFIAPPGHVIISADYSQIELRVLAHLSGDPVF 688 Query: 724 LTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKE 783 AF +DIH TA+EVFGL E VT+E RR AK INFG+IYG +F LARQL I RK Sbjct: 689 CQAFEHDEDIHTRTASEVFGLFPEMVTAEMRRQAKTINFGIIYGQGSFSLARQLGIARKT 748 Query: 784 AQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAA 843 A++++ Y ER+ + +++ QA+EQG+V T+ GRRL + DI S+NG RA A+R A Sbjct: 749 AEEFISAYKERHAKAVGFLDDCIRQAEEQGFVTTILGRRLPIADITSTNGNIRAFAQRNA 808 Query: 844 INAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQL 903 IN P+QG+AADIIK AMI VD +++E + R+IMQVHDELVFEV +D++ A+ + + Sbjct: 809 INYPIQGSAADIIKSAMIRVDGRIRSEGLKSRLIMQVHDELVFEVREDELLAMELLVEEE 868 Query: 904 MENCTRLDVPLLVEVGSGENWDQAH 928 M L +PL V++ G NW +AH Sbjct: 869 MSRAVELRIPLKVDISHGVNWSEAH 893 >UniRef50_B9M4P2 DNA polymerase I n=3 Tax=Deltaproteobacteria RepID=B9M4P2_GEOSF Length = 891 Score = 782 bits (2019), Expect = 0.0, Method: Compositional matrix adjust. Identities = 425/927 (45%), Positives = 587/927 (63%), Gaps = 38/927 (4%) Query: 4 IPQNP-LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 +P+ P L L+DGSSY+YRAY+A L++ G PT A+YG + ML ++ KP H AVVF Sbjct: 1 MPEKPKLYLIDGSSYIYRAYYAIRHLSSPKGFPTNALYGFIQMLLKVVKDRKPDHLAVVF 60 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 DA TFR+E++ YK++R MPDDLR QIEP+ V+A +P+L + G EADD+IGT+A Sbjct: 61 DAGKLTFRNEIYPAYKANRSAMPDDLRLQIEPIKEAVRAFRIPVLELPGFEADDIIGTIA 120 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLAL 182 + EK G +I TGDKD+ Q+VT ++TL++TM + GP EVV ++GVPPE ++D LAL Sbjct: 121 CDCEKKGMAAVIVTGDKDLMQIVTDSVTLLDTMKDKASGPAEVVERFGVPPERVVDILAL 180 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 GDSSDNIPG+PG+GEKTA L+Q LD L + G + +L + + Sbjct: 181 AGDSSDNIPGIPGIGEKTAIKLIQEHHSLDQLLENASVVKG-------KVGERLREFADQ 233 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A LS +LATI+ +V + + P L LF++Y F ++ Sbjct: 234 ARLSRRLATIECNVPVPYSYGDFAASPPDNRLLGDLFREYGFTTLMKEL----------- 282 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 TSVA +S D+Y TIL A + KL +FA D ET SL+ Sbjct: 283 --------TSVA---------TLSSDDYRTILSAGDFSALMDKLGTQSIFAIDLETTSLN 325 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 A +VG+SF+ A YIPVAH YL PDQ+S L+ L+PLL D K+GQN+K Sbjct: 326 PFEAEIVGISFSFSDHQAYYIPVAHHYLGVPDQLSLAHVLQALRPLLLDPAIKKIGQNIK 385 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 YD +L GIE+ GI DTML SY+LN H +++LA L HK I++ ++AG GK+ Sbjct: 386 YDYQVLRRAGIEMEGIWCDTMLASYLLNPNRSSHGLNALAVELLDHKMISYADVAGSGKD 445 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 Q F Q+ +E+A Y+ EDAD T LH P +++ +FE +EMPLV +L+ +E Sbjct: 446 QKNFAQVEVEKASIYSCEDADATWLLHKLFLPQIEESGMERLLFE-LEMPLVKILAEMEL 504 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 GVK+D +L S +LAELE++ + AG FN++S KQL +LFE + KKT Sbjct: 505 YGVKLDLVLLQKLSAGFGSQLAELEREIFQCAGTTFNINSPKQLGEVLFEHLQLPCGKKT 564 Query: 603 PGGAP-STSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 ST+ + LE LA ++ + ++IL+YR L+KLKSTYTD LP ++ ++GR+HTSY+Q Sbjct: 565 KTKTGWSTNVDELERLAAEHEIGRLILQYRSLSKLKSTYTDALPKLVYSESGRIHTSYNQ 624 Query: 662 AVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDK 721 AVT TGRLSS++PNLQNIP+R+EEGR IR AFIA E +I+SADYSQIELR++AHLS+D+ Sbjct: 625 AVTNTGRLSSSEPNLQNIPIRSEEGRSIRHAFIAEEGCLILSADYSQIELRVLAHLSQDR 684 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 AFA+ +DIH TAAEVFGL VT E RR AK INFG+IYG F LA++L + Sbjct: 685 VFCDAFAKDEDIHTRTAAEVFGLFPGMVTPEMRRQAKTINFGVIYGQGPFSLAKELGVST 744 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 K A++++D YF+R+ G +++ +A+ +G+V T+ GRRL +PDI S+NG R+ A+R Sbjct: 745 KVAKEFIDNYFDRHAGARVFLDGCVREAEAKGHVTTILGRRLPIPDINSTNGNIRSFAQR 804 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 AIN P+QG+AADIIK+AM+ V ++ E + R+IMQVHDELVFEV ++ + K + Sbjct: 805 NAINYPIQGSAADIIKQAMVRVSGRMRREGLKSRLIMQVHDELVFEVPLEEKLTMEKLVC 864 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQAH 928 MEN L VPL V+V G NW +AH Sbjct: 865 HEMENALTLRVPLKVDVNFGSNWSEAH 891 >UniRef50_A0LCQ8 DNA polymerase I n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LCQ8_MAGSM Length = 911 Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust. Identities = 431/922 (46%), Positives = 574/922 (62%), Gaps = 18/922 (1%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 L L+DGS YLYRA+ LT G PT A++G + MLR +I KP + FD K T Sbjct: 6 LFLIDGSGYLYRAFFGVRNLTRRDGFPTNAIFGFIKMLRKVIEDEKPDFVTIAFDTKAPT 65 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR + YK++R PMPD+LR QI +H ++ A +P +A+ G EADD+IGT AR A Sbjct: 66 FRHTMDAQYKANRKPMPDELRVQIPVIHDVIDAFNIPRIALEGYEADDIIGTFARLGCAA 125 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSD 188 G V++ +GDKD+ QL+TP + + + + GPE+VV +GV E I D L L GD+SD Sbjct: 126 GVEVVVVSGDKDLMQLITPQVKMFDGSKDKWYGPEDVVESWGVAAERIPDLLGLAGDTSD 185 Query: 189 NIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQ 248 NIPGV G+G KTA L+ G L+ + E+I + K A LEQ + A S Q Sbjct: 186 NIPGVGGIGPKTAAQLIAEFGSLEGVLHGAERI-----KQPKRRTALLEQ-ADTARRSLQ 239 Query: 249 LATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAKP 308 LATI +V L + +Q+P L +++ F T EA K LQA G++ A Sbjct: 240 LATINREVPLPFDLQGARMQRPNWARLREIYQDMSFA--TLAREAEKQLQALGSEAAPSI 297 Query: 309 QETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANL 368 Q + + P + NY I E +A++ +L+ P FA DTET L SA L Sbjct: 298 QIETQPESLP-------NQPNYQVITSEAAFQAFMEQLKGLPRFAVDTETTDLHPHSAEL 350 Query: 369 VGLSFAIEPGVAAYIPVAHDYLDAPD-QISRERALELLKPLLEDEKALKVGQNLKYDRGI 427 VG+S A +P VA YIPV H AP+ Q+ R L LKPLLE + K GQN+KYD I Sbjct: 351 VGISIAWQPMVAYYIPVGHALDAAPEGQLPRADVLAALKPLLESPEIGKTGQNIKYDYQI 410 Query: 428 LANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFN 487 Y I ++GI D+ML SY+L H++D++A L TI FE++AGKG+ ++ F+ Sbjct: 411 FKRYHITMQGIERDSMLYSYLLYGANRAHNLDAIATEELGRTTIKFEDVAGKGRKRIRFD 470 Query: 488 QIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKI 547 Q+ L A YA EDA+VT Q M P+L + G ++E IE PL+PVL+ +E GV + Sbjct: 471 QVPLHLAAPYACEDAEVTWQAAASMAPNLDREPGLKRLYETIERPLIPVLAEMEYAGVLV 530 Query: 548 DPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAP 607 D VL S + + R A L ++ HE+AGE FN++ST+QL ILFEK GIK K+T G Sbjct: 531 DRDVLSTMSADFSKRRARLVEEIHELAGEVFNVNSTQQLGHILFEKMGIKGGKRTKSGF- 589 Query: 608 STSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTAT 666 ST VL +LA D +P+ +L YR L KL+STYTD L +I+P TGRVHTSY+QAVT T Sbjct: 590 STDVSVLSKLADDGEKIPQQVLAYRSLTKLQSTYTDALVALIHPYTGRVHTSYNQAVTLT 649 Query: 667 GRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTA 726 GRLSS+DPNLQNIP+R EEGR IR AFIAP + +++ADYSQIELR++AH+ L A Sbjct: 650 GRLSSSDPNLQNIPIRTEEGRAIRTAFIAPAGWSLLAADYSQIELRVLAHMGNVSRLKEA 709 Query: 727 FAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQK 786 F G DIH ATAAE+FG+PL VT E RR AK INFGL+YGMS FGLA++L I EA+ Sbjct: 710 FHAGLDIHAATAAELFGVPLAQVTGEHRRMAKTINFGLVYGMSPFGLAKRLGIQNNEARA 769 Query: 787 YMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINA 846 YMDLYF RY GV ++M+ T A+ G+VETL GRR + DI ++ + R AER AINA Sbjct: 770 YMDLYFARYDGVRQHMDATIRDARAHGFVETLGGRRCPIRDINATQRSLREFAERTAINA 829 Query: 847 PMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMEN 906 P+QG+A+D+IK AMI + LQA + RM++QVHDELV EV ++ AV + + ME Sbjct: 830 PLQGSASDLIKLAMIRLHGALQAGGFKARMVLQVHDELVLEVPDKELAAVKEVVRSCMEG 889 Query: 907 CTRLDVPLLVEVGSGENWDQAH 928 L +PL+V++G G+NW +AH Sbjct: 890 VMTLSIPLVVDMGVGQNWGEAH 911 >UniRef50_A5WH47 DNA polymerase I n=4 Tax=Bacteria RepID=A5WH47_PSYWF Length = 1022 Score = 777 bits (2006), Expect = 0.0, Method: Compositional matrix adjust. Identities = 440/987 (44%), Positives = 589/987 (59%), Gaps = 79/987 (8%) Query: 6 QNPLILVDGSSYLYRAYHAFP-PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 Q P +LVDGS YL+R YHA P + + G T A+ G LN L ++ +Y PTH AV FD Sbjct: 51 QPPFVLVDGSYYLFRTYHALPKTMMTTQGLTTNAIRGTLNALLKVMRRYHPTHMAVCFDT 110 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 K TFR + E YK++RP M +L QI +H +V+A+G+PLL + G EADD+IGTL Sbjct: 111 KSPTFRHTMSEEYKANRPKMDPELAEQIPYIHRLVRALGIPLLRIEGAEADDIIGTLTHR 170 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMG 184 A + G V+ISTGDKDM QLV + L ++ ++ V K+G+ P IID L LMG Sbjct: 171 AIEEGHHVVISTGDKDMMQLVNDCVILEDSFAGKVVDVPAVEEKFGIKPNQIIDLLTLMG 230 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 D+SD I G+P VG+KTA L +D + A I G + KL + + Sbjct: 231 DASDGIKGIPSVGQKTAVKWLNQYQTVDNILANAHNIKG-------KVGEKLVEFVDNIP 283 Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAE---ELLGLFKKYEFK---------------- 285 QLATI T++++ E L + ++ EL L+ + EFK Sbjct: 284 RDRQLATIVTNLDIGQDWEDLRINTDSSTFVAELRDLYSELEFKNELASLDHPNHPANSS 343 Query: 286 -RWTADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDN-YVTILDEETLKAWI 343 AD +A QA+ AK +++S+ + ++D + TILDE + Sbjct: 344 VHSVADSKADAESQAQVAKTLQHQKQSSIIEHIKNSN----THDKAWHTILDESAFDNLL 399 Query: 344 AKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPD--------- 394 KL+ AP FA DTET S++ A +VGLSF+++ A Y+P+AH + P Sbjct: 400 NKLQAAPYFAVDTETTSINWREAQIVGLSFSVQAHEAYYLPLAHVDYNEPQKKAKNKKEE 459 Query: 395 ------------------QISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIEL- 435 Q+ R+ L LKP+LE+ K+GQ+LKYD +L+ YGIEL Sbjct: 460 AEQAKLLANATVDPLIAKQLDRDTVLAKLKPILENPNIGKIGQHLKYDAHVLSKYGIELN 519 Query: 436 ---RGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALE 492 + DTML SY+LN+ A RH MD LA +L +TI+FE++AGKG Q+TF+++A+ Sbjct: 520 MSPKNWEMDTMLASYVLNAAATRHSMDDLARHYLHTQTISFEDVAGKGAKQVTFDKVAIN 579 Query: 493 EAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVL 552 A YA EDAD+T QL L+ + +E+P+ +L ++E G+ I L Sbjct: 580 IASDYACEDADITYQLFELFQDKLKDDAVNQRLLHELEIPVAQILCQMESEGIMIKRSFL 639 Query: 553 HNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEE 612 + SE + LEK+A+ AGE FNL S KQL +LF+K G+ KKT G ST E Sbjct: 640 NELSERFDEEIVALEKQAYIEAGEAFNLGSPKQLGEMLFDKLGVIGGKKTKSGQYSTGEA 699 Query: 613 VLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSST 672 VL ++ ++PL ++ LEYR LAKLK+TYTD L + + T RVHTSYHQA+T+TGRLSST Sbjct: 700 VLSKI--EHPLAEIALEYRSLAKLKNTYTDALDAVADNDTDRVHTSYHQALTSTGRLSST 757 Query: 673 DPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKD 732 DPNLQNIP+R + GR IRQAFIAP+ V+++ADYSQIELR+MAH S D L AF EG D Sbjct: 758 DPNLQNIPIRTKTGRLIRQAFIAPKGRVLLAADYSQIELRLMAHFSGDDNLTRAFNEGLD 817 Query: 733 IHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYF 792 IH ATAAEV G ++ VT +RR+AKAINFGL+YGMSAFGLA+Q+ + R EAQ Y++ YF Sbjct: 818 IHSATAAEVLGKSVDDVTPTERRNAKAINFGLLYGMSAFGLAKQIQMGRSEAQDYINQYF 877 Query: 793 ERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTA 852 RYPGV YM+ TR A + GY+ET+ GR+LY PDI+ SN R AERAAINAP+QG+A Sbjct: 878 ARYPGVQRYMQETRNSAVDNGYIETILGRKLYTPDIQHSNQMVRRGAERAAINAPLQGSA 937 Query: 853 ADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENC----- 907 AD+IK AMIAVD L + +M++QVHDELVFEV D VD +AK I M+N Sbjct: 938 ADLIKLAMIAVDNVLPKQN--AKMLLQVHDELVFEVDADKVDHIAKLIKNAMQNVLSDTA 995 Query: 908 ------TRLDVPLLVEVGSGENWDQAH 928 VPLLVE G G+NWD+AH Sbjct: 996 KQMGWDVDFAVPLLVETGVGDNWDEAH 1022 >UniRef50_B6R626 DNA polymerase I superfamily protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R626_9RHOB Length = 980 Score = 775 bits (2001), Expect = 0.0, Method: Compositional matrix adjust. Identities = 433/971 (44%), Positives = 592/971 (60%), Gaps = 61/971 (6%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSA-GEPTGAMYGVLNMLRSLIMQY-------KPTHAAV 60 LIL+DGS++++RAYHA PPLT G P GA+ G NML ++ + +PTH AV Sbjct: 20 LILIDGSTFIFRAYHALPPLTRKPDGLPVGAVSGFCNMLWKMMQEGPTKEEGDEPTHFAV 79 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 +FD GKTFR++ + YK+HRPP P+DLR Q + +A G+P + G EADD+I T Sbjct: 80 IFDKSGKTFRNDFYPEYKAHRPPPPEDLRPQFGLIRQATRAFGVPAIEQQGYEADDLIAT 139 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL 180 AR+AE G V I +GDKD+ QLVT I +++TM N I+G EV K+GV PE +++ Sbjct: 140 YARQAEAQGARVTIVSGDKDLMQLVTDKIGMVDTMKNKIIGKPEVFEKFGVGPEKVVEVQ 199 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 +L GDS DN+PGVPG+G KTA L+ G LDTL + E I K L + Sbjct: 200 SLAGDSVDNVPGVPGIGLKTAALLINEFGDLDTLLEQAETIK------QKKRRENLIEFA 253 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWT------------ 288 E A +S +L ++ V +E E V + +G K F T Sbjct: 254 EQARISKRLVQLEEAVPVETPVEDFSVCDVDGAQAVGFLKAMGFTSLTKKVADKTGAVLE 313 Query: 289 ----ADVEAGKWLQAKGAKPAAKPQETS-------------VADEAPEVTATVISYDNYV 331 ADV W AKPA + ++++ + A E++A I Y Sbjct: 314 NIEAADVVIEGW--ESTAKPAEQAEDSAGELEGKAWTAAPLAENVAAEISALPIDNSAYE 371 Query: 332 TILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAH---- 387 T+ E LK WIA+ + A DTETD+L+ + + LVG+S + PG A YIP+AH Sbjct: 372 TVSTVERLKEWIAEAYEVGYVAVDTETDALNAMESGLVGVSLSCTPGKACYIPLAHVDGE 431 Query: 388 -----DYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDT 442 QI A+ LLKP+LED LK+ QN+KYD +L YG+E+ DT Sbjct: 432 GDLLGGGALLEGQIPLAEAITLLKPMLEDPAVLKIAQNMKYDWLVLKRYGVEMAPFD-DT 490 Query: 443 MLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDA 502 ML SY L++ G + MD L++RWL H I F+E+ G GK+Q++F+++ L++A YAAEDA Sbjct: 491 MLLSYALDAGMGGNGMDELSQRWLNHTPIPFKEVCGSGKSQISFDKVPLDKATAYAAEDA 550 Query: 503 DVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLR 562 DVTL+L + P L + + V+E +E P+V L+++ER G+ ID ++L S E Sbjct: 551 DVTLRLWKILKPRLAAEEMTV-VYERLERPMVATLAKMERRGISIDRQMLSLLSGEFAQG 609 Query: 563 LAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALD-Y 621 A LE + H++AGE FN+ S KQL ILF K G+ KKT GA STS VL++LA + Sbjct: 610 AARLESEIHDVAGEIFNVGSPKQLGEILFGKMGLPGGKKTKTGAWSTSASVLDDLAAQGH 669 Query: 622 PLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPV 681 LP I+E+R L+KLKSTYTD LP IN +TGRVHTS+ A T+TGRLSS++PN+QNIP+ Sbjct: 670 ELPSKIVEWRQLSKLKSTYTDALPSFINQETGRVHTSFSLASTSTGRLSSSEPNIQNIPI 729 Query: 682 RNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEV 741 R EGR+IRQAFIA + ++SADYSQIELR++AH++ L AFA+G DIH TA+E+ Sbjct: 730 RTSEGRKIRQAFIAEKGKKLISADYSQIELRVLAHMADIPQLKQAFADGLDIHAMTASEM 789 Query: 742 FGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEY 801 FG+P+E + RR AKAINFG+IYG+SAFGLA QL I R EA Y+ YFER+PG+ +Y Sbjct: 790 FGVPIEGMDPMVRRRAKAINFGIIYGISAFGLANQLGIARGEAGDYIKTYFERFPGIKDY 849 Query: 802 MERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMI 861 ME T+ GYVET+ GRR + PD+ + N R ERAAINAP+QG+AADII+RAM+ Sbjct: 850 MEETKKFVHANGYVETIFGRRAHYPDVNTKNPNMRQFYERAAINAPIQGSAADIIRRAMV 909 Query: 862 AVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCT----RLDVPLLVE 917 +D L+ +M++QVHDEL+FE+ +D VD K + ME T +L VPL VE Sbjct: 910 RMDEVLETANLDAQMLLQVHDELIFELPEDQVDETKKLVIATMEKATEPALQLSVPLKVE 969 Query: 918 VGSGENWDQAH 928 + +NW++AH Sbjct: 970 AEAADNWEEAH 980 >UniRef50_Q6X9Q9 DNA polymerase I n=1 Tax=Spirochaeta thermophila RepID=Q6X9Q9_9SPIO Length = 897 Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust. Identities = 415/928 (44%), Positives = 590/928 (63%), Gaps = 38/928 (4%) Query: 7 NPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 PL L+D +YRAY A P+ G T A+YG ML + +Y P + VV D+ Sbjct: 2 KPLFLIDAYGLIYRAYFALIRAPMRTKDGRNTSAIYGFFRMLFRFVKEYDPVYCGVVLDS 61 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 TFR++ FE YK+ R P+DL QI + +++A+G + ++G EADDV+GTLA Sbjct: 62 LTPTFREKTFEAYKATRQKTPEDLHPQIPVIEEILEALGFATVRMNGFEADDVMGTLAAM 121 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTN--TILGPEEVVNKYGVPPELIIDFLAL 182 A+ GRP + +GDKD+AQLVT + ++ + +L E V K+GV + I+DFLAL Sbjct: 122 AQAEGRPCFVVSGDKDLAQLVTKGVKIVRMDKDDFVVLDEEGVKEKWGVRADQIVDFLAL 181 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 +GD+SDNIPGV G+GEKTAQ LL G L+ +YA ++++ ++ KLE+ +E Sbjct: 182 VGDASDNIPGVEGIGEKTAQRLLAEYGSLEGVYAHLDELS-------PSLRRKLEEGRER 234 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A+LS LATI+TD++L LT L ++P + LF Y+ + +V G Sbjct: 235 AFLSRDLATIRTDLDLSLTIGDLRRREPEVQRARELFLAYDIRSLAQEV---------GG 285 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAK-LEKAPVFAFDTETDSL 361 P+ + T + E P +Y + D +L W+ + LE+ V A DTETD L Sbjct: 286 SPSVGEKPT-LEVEGPSRAGV-----SYEVVTDRASLSRWVEEALERGAV-AVDTETDGL 338 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAH-DYLDAPDQISRERALELLKPLLEDEKALKVGQN 420 D ++ LVG+SFA++ G A Y+P+A D P + RE +L PLL + +KVGQN Sbjct: 339 DPLTCRLVGVSFAVDEGRACYVPLAAPDVRPLPADVVRE----VLSPLLVSTEVVKVGQN 394 Query: 421 LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG 480 LK+D +L +G+ G FDTM+ +++L S AGR+++D LAE++L +TI ++++ KG Sbjct: 395 LKFDYHVLRRWGVRPEGPFFDTMVAAWLLESDAGRYNLDRLAEKYLGWRTIHYKDVVEKG 454 Query: 481 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI 540 +F + + EAG YAAEDAD+ L+L ++ + + +G VF +EMPL+ +L+R+ Sbjct: 455 A---SFETVPVAEAGVYAAEDADIALRLS-RVLKERLEAEGLGRVFYEMEMPLLSILARM 510 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK 600 E G+ +D + L EL R++ +EK+ E+ G EFN+ STKQLQ +LF ++G+ P+K Sbjct: 511 EEWGIGLDGEALSAFGRELEERISTIEKEIFELVGHEFNVGSTKQLQEVLFVERGLPPVK 570 Query: 601 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 KT G ST VLEELA P+ +LEYR L KLK+TY D LP ++NP TGR+HT + Sbjct: 571 KTKTGF-STDTSVLEELAARDPVAAKVLEYRSLTKLKNTYVDVLPGLVNPGTGRLHTWFS 629 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRD 720 Q TATGRLSS DPNLQNIP++ EEGRRIR+AF+ + +SADYSQIEL I+AHLS D Sbjct: 630 QVGTATGRLSSKDPNLQNIPIKTEEGRRIREAFVPQRGWWFLSADYSQIELVILAHLSED 689 Query: 721 KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 L AF EG+D+HRAT + +FG+P E VT EQRR AK INFG+IYGMSAF L+R+L IP Sbjct: 690 PALCRAFREGEDVHRATGSLLFGVPPEAVTPEQRRIAKTINFGVIYGMSAFRLSRELGIP 749 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 RKEA++++D YF Y GV ++ERT A+A+E+GYV TL GR+ LP I S N ++ AE Sbjct: 750 RKEAERFIDAYFTTYAGVRAFIERTIAEAEEKGYVTTLFGRKRPLPYITSRNKTQKTGAE 809 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 R A+N P+QG+ ADIIK AMI +DA ++ RMI+QVHDEL+FEV ++++ + + + Sbjct: 810 RIAVNTPIQGSGADIIKLAMIDLDAQMRRMGLASRMILQVHDELIFEVPPEELEVMKRLV 869 Query: 901 HQLMENCTRLDVPLLVEVGSGENWDQAH 928 + ME RL VPL VE+G G NW +AH Sbjct: 870 RERMEGVVRLSVPLRVEMGVGRNWGEAH 897 >UniRef50_B8H5J7 DNA polymerase I n=23 Tax=Alphaproteobacteria RepID=B8H5J7_CAUCN Length = 982 Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/952 (44%), Positives = 579/952 (60%), Gaps = 36/952 (3%) Query: 5 PQNPLILVDGSSYLYRAYHAFPPLT-NSAGEPTGAMYGVLNMLRSLIMQYK---PTHAAV 60 P L LVDGS+YL+RAYHA PPLT S G P GA+ G NML L+ + PTH AV Sbjct: 39 PAVRLFLVDGSAYLFRAYHALPPLTRKSDGLPVGAVQGFCNMLWKLLRDMQGDTPTHLAV 98 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 ++D KTFR+ L++ YK+HRPP P+DL Q + A G+P + + G EADD+I Sbjct: 99 IWDHSEKTFRNALYDQYKAHRPPPPEDLIPQFPLVREATLAFGVPAIELPGYEADDLIAA 158 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL 180 A +A G +I + DKD+ QLV +++ + M + E+V K+GV PE ++D Sbjct: 159 YACKARDIGGEAIIVSSDKDLMQLVGDGVSMYDPMKGVRIEREQVFEKFGVYPEKVVDVQ 218 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 AL GDS DN+PG PG+G KTA L+ G LDTL A +I R +T+ +Q + Sbjct: 219 ALCGDSVDNVPGAPGIGIKTAAQLITEYGDLDTLLARAGEIKQPKRR--ETLINFADQIR 276 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 LS L + D L + L V++P E L ++ EF+ V G Sbjct: 277 ----LSRALVKLDCDTPLPQPLDALTVREPDKEALAAFLEQMEFRSLARRVGDGSAAATP 332 Query: 301 GA--KPAAKPQETSVA---------DEAPEVTATVISYDNYVTILDEETLKAWIAKLEKA 349 G +PAA P+ V+ A V I + Y + D TLKAW+AK Sbjct: 333 GTLDRPAAPPKAPVVSVSYMGAAARAAAHPVEPVKIDHAAYACVRDLATLKAWVAKATDK 392 Query: 350 PVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHD------YLDAP---DQISRER 400 + AFDTETD+L + +A L G+S AI PG A YIP++H +AP +QI Sbjct: 393 GLVAFDTETDALSSATAGLCGVSLAIAPGEACYIPISHCEKADGLAFEAPADIEQIPLAD 452 Query: 401 ALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDS 460 + LKPLLED LKV QN KYD +LA +GI++ I DTML SY+L + H MD Sbjct: 453 VIATLKPLLEDPAVLKVAQNAKYDIAVLARHGIQVAPIE-DTMLISYVLEAGLHGHGMDE 511 Query: 461 LAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHK 520 L+E L HK I F+++AG GK Q++F +AL EA YAAEDADVTL+L+ + P L + Sbjct: 512 LSELHLGHKPIPFKQVAGSGKGQISFKHVALPEATAYAAEDADVTLRLYHHLKPQLARAS 571 Query: 521 GPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNL 580 V+E +E P+ VL+ +E NGV++DP+ L S E +LR+A+ E +A E+ G FNL Sbjct: 572 LS-TVYETLERPMPAVLAMMENNGVRVDPEALRLLSNEFSLRMAQFEARAQELVGRPFNL 630 Query: 581 SSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTY 640 S KQ+ +LF + +K KKT G ST +VLE LAL++ LP+V+L++R L+KLK TY Sbjct: 631 GSPKQIGDVLFGEMQMKGGKKTATGQWSTDSDVLESLALEHELPRVLLDWRQLSKLKGTY 690 Query: 641 TDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYV 700 T+ L I P TGRVHTSY A T TGRLSS+DPNLQNIPVR EEGR+IR+AF+A +V Sbjct: 691 TENLIAAIAPSTGRVHTSYALAATTTGRLSSSDPNLQNIPVRTEEGRKIRKAFVAAPGHV 750 Query: 701 IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAI 760 ++SADYSQIELR++AH+ L AF EG DIH TA+E+F P+E + RR AKAI Sbjct: 751 LISADYSQIELRLLAHIGDIPQLKKAFQEGLDIHAMTASEMFDTPIEGMDPMIRRRAKAI 810 Query: 761 NFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDG 820 NFG++YG+SAFGLA QL I + EA Y+ YFER+PG+ YM+ T+A +E GYV T+ G Sbjct: 811 NFGIVYGISAFGLANQLGISQGEAGAYIKTYFERFPGIQAYMDATKAFVREHGYVTTIFG 870 Query: 821 RRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQV 880 R++ +PDI++ + A R AERAAINAP+QG AAD+++RAMI + L+A RM++QV Sbjct: 871 RKINIPDIEAKSAAHRQFAERAAINAPIQGAAADVMRRAMIRMPVALEAAGLSTRMLLQV 930 Query: 881 HDELVFEVHKDDVDAVAKQIHQLMENCTR----LDVPLLVEVGSGENWDQAH 928 HDELVFE + + + + +ME L +PL VE + NWD+AH Sbjct: 931 HDELVFEAPEAEAERACAVVRAVMEKAAEPAVALSIPLTVEARAASNWDEAH 982 >UniRef50_Q9S1G2 DNA polymerase I n=25 Tax=Rhizobiales RepID=DPO1_RHILE Length = 1016 Score = 753 bits (1943), Expect = 0.0, Method: Compositional matrix adjust. Identities = 444/1003 (44%), Positives = 601/1003 (59%), Gaps = 93/1003 (9%) Query: 9 LILVDGSSYLYRAYHAFPPLT-NSAGEPTGAMYGVLNMLRSLIMQYK-------PTHAAV 60 L LVDGS +++RA+HA PPLT + G P GA+ G NML L+ + PTH AV Sbjct: 24 LFLVDGSGFIFRAFHALPPLTRKTDGLPIGAVSGFCNMLWKLLRDARNTDVGVTPTHLAV 83 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 +FD KTFR +L++ YK++R P++L Q + +A LP + G EADD+I T Sbjct: 84 IFDYSAKTFRKDLYDAYKANRSAPPEELIPQFGLIREATRAFNLPCIETEGFEADDIIAT 143 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL 180 AR+AE G V I + DKD+ QLV+PN+ + ++M + +G +V+ K+GVPPE +ID Sbjct: 144 YARQAEATGADVTIVSSDKDLMQLVSPNVHMYDSMKDKQIGIPDVIEKWGVPPEKMIDLQ 203 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 A+ GDS DN+PG+PG+G KTA LL+ G LDTL +I + R +T+ A N Sbjct: 204 AMTGDSVDNVPGIPGIGPKTAAQLLEEYGDLDTLLERATEIKQVKRR--ETILA----NI 257 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 ++A LS L ++TDV L+L + L ++ +L+G K EF T V A Sbjct: 258 DMARLSRDLVRLRTDVPLDLDLDALVLEPQNGPKLIGFLKTMEFTTLTRRVAEACDCDAS 317 Query: 301 GAKPA-----------------AKPQETSVADEAPEVTA--------------------- 322 +PA A+P+ VA PEV+ Sbjct: 318 AIEPAIVRIEWGETARGPDLDAAEPE--PVAGGIPEVSGESVPMPPRAKAKSAVEGAFSP 375 Query: 323 -----------TVISYDN--YVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLV 369 + +D+ YVTI D TL WIA + AFDTET SLD + A LV Sbjct: 376 ADLAKARAEAFATLPFDHSAYVTIRDLVTLDRWIADARATGLVAFDTETTSLDAMQAELV 435 Query: 370 GLSFAIEPGVA---------AYIPVAHD--------YLDAPDQISRERALELLKPLLEDE 412 G S AI A AY+P+ H A +QI AL LK LLEDE Sbjct: 436 GFSLAIADNTADPTGTKIRAAYVPLVHKNGVGDLLGGGLADNQIPMRDALPRLKALLEDE 495 Query: 413 KALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTIT 472 LKV QNLKYD +L YGIE R DTML SY+L++ G H MD L+E++L H I Sbjct: 496 SVLKVAQNLKYDYLLLKRYGIETRSFD-DTMLISYVLDAGTGAHGMDPLSEKFLGHTPIP 554 Query: 473 FEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMP 532 ++++AG GK +TF+ + ++ A YAAEDADVTL+L L + P L G +V+E +E P Sbjct: 555 YKDVAGSGKANVTFDLVDIDRATHYAAEDADVTLRLWLVLKPRLAA-AGLTSVYERLERP 613 Query: 533 LVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFE 592 L+PVL+R+E G+ +D ++L S EL A LE + + +AGE FN+ S KQL ILF Sbjct: 614 LLPVLARMEARGITVDRQILSRLSGELAQGAARLEDEIYVLAGERFNIGSPKQLGDILFG 673 Query: 593 KQGIKPLKKTPGGAPSTSEEVLEELAL-DYPLPKVILEYRGLAKLKSTYTDKLPLMINPK 651 K G+ KT G STS +VLE+LA + LP+ I+++R + KLKSTYTD LP ++P+ Sbjct: 674 KMGLSGGSKTKTGQWSTSAQVLEDLAAAGFELPRKIVDWRQVTKLKSTYTDALPGYVHPE 733 Query: 652 TGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIEL 711 T RVHTSY A T TGRLSS++PNLQNIPVR EGR+IR AFI+ + ++SADYSQIEL Sbjct: 734 TKRVHTSYSLASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPGHKLISADYSQIEL 793 Query: 712 RIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAF 771 R++AH++ L AF +G DIH TA+E+FG+P+E + E RR AKAINFG+IYG+SAF Sbjct: 794 RVLAHVAEIPQLTKAFEDGVDIHAMTASEMFGVPVEGMPGEVRRRAKAINFGIIYGISAF 853 Query: 772 GLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSS 831 GLA QL+I R EA Y+ YFER+PG+ +YME +A A+++GYVET+ GRR+ P+I+SS Sbjct: 854 GLANQLSIERSEAGDYIKKYFERFPGIRDYMESRKAMARDKGYVETIFGRRINYPEIRSS 913 Query: 832 NGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWL--QAEQPRVRMIMQVHDELVFEVH 889 N + RA ERAAINAP+QG+AAD+I+RAMI ++ L RVRM++QVHDEL+FEV Sbjct: 914 NPSVRAFNERAAINAPIQGSAADVIRRAMIKIEPALVEVGLADRVRMLLQVHDELIFEVE 973 Query: 890 KDDVDAVAKQIHQLMENCT----RLDVPLLVEVGSGENWDQAH 928 DV+ I +MEN T + VPL V+ + NWD+AH Sbjct: 974 DQDVEKAMPVIVSVMENATMPALEMRVPLRVDARAATNWDEAH 1016 >UniRef50_A6KZN3 DNA polymerase I n=15 Tax=Bacteroides RepID=A6KZN3_BACV8 Length = 971 Score = 734 bits (1895), Expect = 0.0, Method: Compositional matrix adjust. Identities = 419/985 (42%), Positives = 585/985 (59%), Gaps = 78/985 (7%) Query: 7 NPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 + L L+D + +YRAY+AF P NS G T A+ G +N L ++ + PTH V FD Sbjct: 2 DKLFLLDAYALIYRAYYAFIKSPRINSKGFNTSAVLGFVNTLEEVLKKENPTHIGVAFDP 61 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 G TFR E +E YK+ R P+ +R + + +++A +P+L V G EADDVIGTLA E Sbjct: 62 AGPTFRHEAYEQYKAQREETPEVIRLSVPIIKDIIRAYRIPILEVPGYEADDVIGTLATE 121 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLI---NTMTNTILGPEEVVNKYGV-PPELIIDFL 180 A K G + T DKD QLV N+ + +T ++G EEV K+ + P +ID L Sbjct: 122 AGKRGITTYMMTPDKDYGQLVGGNVFMYRPKHTGGFEVMGIEEVKAKFDIQSPAQVIDML 181 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 LMGDSSDNIPG PGVGEKTAQ L+ G ++ L + ++ G + K+E N+ Sbjct: 182 GLMGDSSDNIPGCPGVGEKTAQKLIAQYGSIENLLSHSAELKG-------ALKTKVETNR 234 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFK--------RWTADVE 292 ++ S LATIK DV + L ++L+ ++P EEL +F++ EF+ R Sbjct: 235 KMIEFSKFLATIKIDVPIALNMDELKREEPNEEELRKIFEEMEFRTLIDRVFNRDKKSAF 294 Query: 293 AGKWLQAKGAKPAAKPQ----------------------ETSVADEAP------------ 318 AG + A G P + + E + E+P Sbjct: 295 AGTYTDATGNDPQGRNRTPGGSARQGNTPNGSGQLSLFGEPASNGESPASPSSPQGNLFA 354 Query: 319 ---------EVTATVISYDN----YVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNIS 365 E + + DN Y + EE + L +F+ DTET D I+ Sbjct: 355 EFTDGGTESEKYSNLACLDNLKYDYQLVDTEEKRTELLQNLLTKEIFSLDTETTGTDPIT 414 Query: 366 ANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDR 425 A LVG+SF+ A Y+PV D +A ++ + +P E E LKVGQN+KYD Sbjct: 415 AELVGMSFSYAENQAFYVPVPADRAEA------QKIVNEFRPAFEKEGVLKVGQNIKYDM 468 Query: 426 GILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAG-KGKNQL 484 +L NYG E+RG FDTM+ Y+L RH+MD LAE +L ++TI EE+ G KGK Q Sbjct: 469 LVLGNYGTEVRGPLFDTMVAHYVLQPEL-RHNMDYLAEIYLHYQTIHIEELIGPKGKGQK 527 Query: 485 TFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNG 544 ++ E +YA EDADVTL+L + +L+ + +F IEMPLVPVL+ +ERNG Sbjct: 528 NMRDLSPEAIYKYACEDADVTLKLKNILEQELKTNDAE-KLFYEIEMPLVPVLAYMERNG 586 Query: 545 VKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEK-QGIKPLKKTP 603 V++D + L SE T R+ ++E++ H++AG +FN++S KQ+ +LF+K + ++ KKT Sbjct: 587 VRVDTEALKQTSEHFTARMNQIEEEVHQLAGTDFNIASPKQVGEVLFDKLRIVEKAKKTK 646 Query: 604 GGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAV 663 G TSEEVLE L + + ILE+RGL KL TY D LPL+IN +TG++HTS++Q V Sbjct: 647 TGQYVTSEEVLESLRGKHEIVGKILEHRGLKKLLGTYIDALPLLINKETGKIHTSFNQTV 706 Query: 664 TATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGL 723 TATGRLSS++PNLQNIP+RNE+G+ IR+AFI + SADYSQIELRIMAHLS D + Sbjct: 707 TATGRLSSSNPNLQNIPIRNEDGKEIRKAFIPDDGCEFFSADYSQIELRIMAHLSGDTNM 766 Query: 724 LTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKE 783 + AF EG DIH ATAA+V+ + ++ VT EQR AK NFG+IYG+S FGLA ++N+ RKE Sbjct: 767 IEAFKEGDDIHAATAAKVYKISIDKVTREQRSKAKTANFGIIYGISVFGLAERMNVDRKE 826 Query: 784 AQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAA 843 A++ +D YFE YP + EYM+++ A+ QGY+ET+ GR+ YLPDI S N R AER A Sbjct: 827 AKELIDGYFETYPQIKEYMDKSIDLARGQGYIETIFGRKRYLPDINSRNSVVRGYAERNA 886 Query: 844 INAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQL 903 INAP+QG+AADIIK AM+ + Q+E + +MI+QVHDEL F V ++ + V K + + Sbjct: 887 INAPIQGSAADIIKVAMVRIYQRFQSESIKSKMILQVHDELNFSVLPEEKEKVQKIVIEE 946 Query: 904 MENCTRLDVPLLVEVGSGENWDQAH 928 MEN R+ VPL + G G NW +AH Sbjct: 947 MENAYRMQVPLRADCGWGSNWLEAH 971 >UniRef50_B6IUP1 DNA polymerase I, putative n=2 Tax=Alphaproteobacteria RepID=B6IUP1_RHOCS Length = 987 Score = 733 bits (1893), Expect = 0.0, Method: Compositional matrix adjust. Identities = 427/968 (44%), Positives = 576/968 (59%), Gaps = 64/968 (6%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 L LVDGS +++RAYHA PPL G P A+ G NML L+ + K AV+FDAK Sbjct: 36 LYLVDGSGFIFRAYHALPPLNRPDGTPVNAVLGFTNMLMKLLAELKAEAVAVIFDAKRLN 95 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR+E + YK++RP P+DLR Q + V A LP L + G EADD+I T AR A + Sbjct: 96 FRNEFYPDYKANRPEPPEDLRPQFAIIREAVDAFCLPCLELEGYEADDLIATYARLAREQ 155 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSD 188 GRPV + + DKD+ QLV + L++ M ++GPEEV K+GVPPE ++D AL GDS D Sbjct: 156 GRPVTVVSSDKDLMQLVRDGVRLMDPMKGRLIGPEEVAEKFGVPPEKVVDVQALAGDSVD 215 Query: 189 NIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQ 248 N+PGVPG+G KTA L+ G L+TL +I R KL +N E+A +S + Sbjct: 216 NVPGVPGIGVKTAAQLITEYGDLETLLERAGEIRQAGRR------QKLLENAELARISKR 269 Query: 249 LATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEA--------------- 293 L + V + + ++L V++P +L+ K F+ VEA Sbjct: 270 LVRLDDAVPVPVPLDRLRVREPDHHKLIDWLKVQGFRSVIHKVEAELAADGTLVDGAAPA 329 Query: 294 ------------GKWLQAKGAKPAAKP----QETSVADEAPEVTATVISYDNYVTILDEE 337 L ++ PAA P ++ VA + V Y + D + Sbjct: 330 PAPAGRAPRTDVRTALDSRSYAPAATPVPEARDDGVAPQPERV--------EYELVQDLD 381 Query: 338 TLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAH---------- 387 L WI + +A A DTETD L +SA LVG+S ++EPG A YIPV H Sbjct: 382 ALDRWIERAREAGTVAVDTETDGLTPVSAGLVGISLSVEPGRACYIPVQHIDPATPKGAT 441 Query: 388 DYLD------APDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFD 441 LD P QI+ AL LKPLLED LKVGQN+K+D I A +GI + I D Sbjct: 442 GGLDLGGTPPPPPQIALADALARLKPLLEDPAVLKVGQNVKFDWQIFARHGIAMAPID-D 500 Query: 442 TMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAED 501 TML SY+L + H MD LA R L H TI ++E+ G GK+++TF+++ L++A YAAED Sbjct: 501 TMLISYVLGTGLHGHGMDELALRHLGHTTIKYDEVTGTGKSRITFDRVPLDKARDYAAED 560 Query: 502 ADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTL 561 AD+TL+LH + DL + + ++E +E PLVPV++R+E GV +D VL S + Sbjct: 561 ADITLRLHRVLKHDLVRQHM-VTLYETVERPLVPVVARMESRGVLVDRAVLRQMSSDFAQ 619 Query: 562 RLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELA-LD 620 R+ E+E + ++A FN+ S KQL ILF++ + K GA T VLE LA Sbjct: 620 RMLEMEAEIQKLAPRAFNVGSPKQLGEILFDEMKLPGGSKGKSGAWGTDSGVLEGLAEQG 679 Query: 621 YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIP 680 + + +L++R LAKLKSTYTD L I+ +TGRVHTS+ A TATGRLSSTDPNLQNIP Sbjct: 680 VEIAQKVLDWRQLAKLKSTYTDALAEQIDARTGRVHTSFALAATATGRLSSTDPNLQNIP 739 Query: 681 VRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAE 740 +R EEGR+IR+AF+A ++++S DYSQIELR++A ++ L AF +G DIH TA++ Sbjct: 740 IRTEEGRKIRRAFVARPGHLLLSVDYSQIELRLVAEMAGVPALRRAFHDGIDIHAMTASQ 799 Query: 741 VFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLE 800 VFG+PL+ +TSE RR AKAINFG+IYG+S FGL RQL I EA ++ YFER+P + Sbjct: 800 VFGVPLDQMTSEIRRKAKAINFGIIYGISGFGLGRQLGITPGEAGAFIRQYFERFPELQT 859 Query: 801 YMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAM 860 YME T+A A+E GYV TL GRR ++ I+ ARRA AER AINAP+QGTAADIIKRAM Sbjct: 860 YMETTKAFAREHGYVTTLLGRRCWIQGIREKAPARRAYAERQAINAPIQGTAADIIKRAM 919 Query: 861 IAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGS 920 ++ L A + M++QVHDEL+FEV + V+ A + +ME L VPL+ E G Sbjct: 920 ARIEPALAAAKLDAAMLLQVHDELLFEVPEAQVEETAAVVRGVMEGAAGLGVPLVAEAGW 979 Query: 921 GENWDQAH 928 NW +AH Sbjct: 980 APNWAEAH 987 >UniRef50_A9H4T5 DNA polymerase I n=43 Tax=Alphaproteobacteria RepID=A9H4T5_GLUDA Length = 943 Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust. Identities = 414/975 (42%), Positives = 559/975 (57%), Gaps = 95/975 (9%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 LILVDGS +++RA+HA PP+T G P A++G NML L+ + TH AV+FDA T Sbjct: 9 LILVDGSGFIFRAFHALPPMTAPDGTPVNAVFGFTNMLARLLRDHVGTHLAVIFDAGRVT 68 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR+ +++ YK+HRP P++LR Q + A G+P + +G EADD+I AR A Sbjct: 69 FRNGIYDQYKAHRPEPPEELRPQFALVRDATAAFGVPGIEEAGWEADDLIAAYARLVTDA 128 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSD 188 G + + DKD+ QL+ P + +++ + +GP+EV K+GV P+ +ID AL+GDS D Sbjct: 129 GGRCTVVSSDKDLMQLIRPGVEMLDPIRQKPIGPKEVEAKFGVTPDKVIDVQALIGDSVD 188 Query: 189 NIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAK-----LEQNKEVA 243 N+PGVPG+G KTA AL+ G LD + GA M L ++ E A Sbjct: 189 NVPGVPGIGPKTASALIAEYGSLDAI-----------LDGAPAMKPSKRRDSLIEHAERA 237 Query: 244 YLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAK 303 LS L T++ D L E L + P +V+ G+WLQ+ G + Sbjct: 238 RLSRVLVTLREDAPCPLGLEDLICRDPD------------------EVKLGEWLQSMGFR 279 Query: 304 P-------------------------AAKPQETSVADEAPEVTATVISYDNYVTILDEET 338 A T D AP Y Y T+ Sbjct: 280 SLLHRMGMKESAAAVGVASSAPAPAAAVAAAPTPSPDRAP--------YGPYETVRTAGA 331 Query: 339 LKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYL-------- 390 L+ W+A+ A A DTETD LD + A LVG+S A+ PG A YIP+AH Sbjct: 332 LETWVAEARTAGFCAIDTETDGLDPLRAGLVGISLAVAPGRACYIPLAHTAEPPPPQLLP 391 Query: 391 ----------DAPD----QISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELR 436 DAPD Q+ AL +L PLL D LK+ QN K+D +L G Sbjct: 392 DLLLEPAPQDDAPDPVGPQLETGLALAILGPLLADASVLKIFQNAKFDLLVLTRAGAPQP 451 Query: 437 GIAFDTMLESYILNSVAGRHD--MDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEA 494 DTML SY AGRH MD L+ +L H I ++E+ G G+N++ F ++ + A Sbjct: 452 APVDDTMLISY--AQFAGRHGQGMDELSRLYLGHTPIPYDEVTGTGRNRVPFARVDVARA 509 Query: 495 GRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHN 554 YAAEDADVTL+L L + P L+ H L ++E +E PLV VL+ +ER G+ ID L Sbjct: 510 TAYAAEDADVTLRLWLSLRPTLRIHHA-LALYEELERPLVAVLADMERAGIAIDVVELRR 568 Query: 555 HSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVL 614 S + R+A++E + +AG FN+ S KQL ILF++ G+ K+ GA T VL Sbjct: 569 MSADFATRMAQMEAEIQALAGRSFNVGSPKQLGEILFDEMGLPGGKRMKSGAWGTDSSVL 628 Query: 615 EELA-LDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTD 673 ++LA + LP IL +R LAKLKSTY D L +P T RVHTS+ A+T+TGRLSS + Sbjct: 629 QDLADQGHDLPGRILAWRQLAKLKSTYADALVKQADPDTARVHTSFQMAITSTGRLSSNE 688 Query: 674 PNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDI 733 PNLQNIP+R EEG RIR+AF+A +V++SADYSQIELR++AH++ L AFA G+DI Sbjct: 689 PNLQNIPIRTEEGGRIRRAFVAAPGHVLLSADYSQIELRLLAHVADIPALREAFALGQDI 748 Query: 734 HRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFE 793 H TA+EVFG+P+E + RR AKAINFG+IYG+SAFGL RQL IP EA+ Y+D YF Sbjct: 749 HARTASEVFGIPIEGMDPLTRRRAKAINFGIIYGISAFGLGRQLGIPPGEARAYIDAYFA 808 Query: 794 RYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAA 853 RYPG+ YME + +AK+QGYV T GRR ++P I + RRA AER AINAP+QG AA Sbjct: 809 RYPGIRAYMETVKQEAKDQGYVTTPFGRRCWVPGIADRSAVRRAYAERQAINAPLQGGAA 868 Query: 854 DIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVP 913 DIIKRAM+ + L + R+++QVHDEL+FEV DA++ + Q+ME+ L VP Sbjct: 869 DIIKRAMVRLPHALASAGLDGRLLLQVHDELLFEVRAGQQDALSALVKQVMESAASLSVP 928 Query: 914 LLVEVGSGENWDQAH 928 L+VE G+G NW AH Sbjct: 929 LVVETGTGANWADAH 943 >UniRef50_A4YLA1 DNA polymerase I (POL I) n=63 Tax=cellular organisms RepID=A4YLA1_BRASO Length = 1034 Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust. Identities = 430/987 (43%), Positives = 582/987 (58%), Gaps = 76/987 (7%) Query: 9 LILVDGSSYLYRAYHAFPPLT-NSAGEPTGAMYGVLNMLRSLIMQY----KPTHAAVVFD 63 + LVDGSSY++RAYHA PPL S G A+ G NML L+ +PTH A+VFD Sbjct: 57 VFLVDGSSYIFRAYHALPPLNRKSDGLNVNAVLGFCNMLWKLLRDMPETDRPTHLAIVFD 116 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 TFR++++ YK+HRPP PDDL Q + V+A LP L SG EADD+I T AR Sbjct: 117 KSEVTFRNQIYADYKAHRPPAPDDLIPQFALIREAVRAFDLPCLEQSGFEADDLIATYAR 176 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALM 183 A + G I + DKD+ QLV +T+ +TM + +G EV+ K+GVPPE +++ AL Sbjct: 177 LACERGATTTIVSSDKDLMQLVNDCVTMYDTMKDRRIGTAEVIEKFGVPPEKVVEVQALA 236 Query: 184 GDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVA 243 GDS+DN+PGVPG+G KTA L+ G L++L +I R A L +N E A Sbjct: 237 GDSTDNVPGVPGIGIKTAAQLINDYGDLESLLTRAAEIKQPKRREA------LIENAEKA 290 Query: 244 YLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWT-----------ADVE 292 +S QL + V LE+ + L V +P +L+ K EF T ADV Sbjct: 291 RISRQLVLLDDKVALEVPLDDLAVHEPDPRKLIAFLKAMEFSTLTRRVAEYSQIDPADVT 350 Query: 293 AGKWLQAKGAKPAAKPQETSVAD---EAPEVTATV------------------------- 324 A L+ G+ PAA P +S A AP AT Sbjct: 351 ADAQLKV-GSSPAAAPTPSSPASGGGSAPSKPATAPRTGDPRIDKSAMGKGTPAGLAESR 409 Query: 325 --------ISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIE 376 I D Y T+ LKA++A+ + D + S+D + ANL GLS A+ Sbjct: 410 AEAAKSARIDRDKYQTLRSLPELKAFLARAHEFGRVTVDVKASSIDPMQANLCGLSLALA 469 Query: 377 PGVAAYIPVAH----------DYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRG 426 PG A YIP+AH D APDQI AL LKP+LE LK+G N+K+ Sbjct: 470 PGEACYIPLAHRQAGDGGGLFDAGLAPDQIKESEALAALKPVLESTGLLKIGYNIKFLAV 529 Query: 427 ILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTF 486 +LA +GI L+ + D +L SY L++ G H +DSLAE L H I+ E+ G GKN+LTF Sbjct: 530 LLAQHGITLQNVD-DILLMSYALDAGRGSHKLDSLAEHVLAHAIISEGELIGSGKNKLTF 588 Query: 487 NQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVK 546 Q+A++ A +AAE ADV ++ + P L + V+E +E PLV VL+R+ER G+ Sbjct: 589 EQVAIDRATAHAAEAADVIHRVWRVLKPRLTAERM-TAVYETLERPLVSVLARMERRGIS 647 Query: 547 IDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGA 606 ID +VL S + A +E + E+AGE N+ S KQ+ ILF K G+ +T GA Sbjct: 648 IDRQVLSRLSGDFAQTAARVEAELQELAGEPINVGSPKQIGDILFGKMGLSGGTRTKTGA 707 Query: 607 PSTSEEVLEELA-LDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTA 665 STS +L++LA + ILE+R ++KLKSTYTD LP +NP+T RVHT+Y A T Sbjct: 708 WSTSASILDDLAEQGNDFARKILEWRQVSKLKSTYTDALPTYVNPQTHRVHTTYALAATT 767 Query: 666 TGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLT 725 TGRLSS +PNLQNIPVR E+GR+IR+AFIA Y +VSADYSQIELR++A ++ L Sbjct: 768 TGRLSSNEPNLQNIPVRTEDGRKIRRAFIATPGYKLVSADYSQIELRLLAEIADIPVLKQ 827 Query: 726 AFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQ 785 AF +G DIH TA+E+FG+P++ + SE RR AKAINFG+IYG+SAFGLA QL I R+EA Sbjct: 828 AFKDGLDIHAMTASEMFGVPIKDMPSEVRRRAKAINFGIIYGISAFGLANQLGIAREEAS 887 Query: 786 KYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAIN 845 Y+ YFER+PG+ YM+ TR ++ GYV TL GR+ + P+IK+SN + RA ERAAIN Sbjct: 888 AYIKRYFERFPGIRAYMDETREFCRKNGYVVTLFGRKCHYPEIKASNASVRAFNERAAIN 947 Query: 846 APMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLME 905 A +QGTAADII+RAM V+ L ++ +M++QVHDEL+FEV +D+V A + +M+ Sbjct: 948 ARLQGTAADIIRRAMTRVEEALAQKKLSAQMLLQVHDELIFEVPEDEVAATLPVVQHVMQ 1007 Query: 906 N----CTRLDVPLLVEVGSGENWDQAH 928 + L VPL V+ + +NWD+AH Sbjct: 1008 DAPFPAVLLSVPLHVDARAADNWDEAH 1034 >UniRef50_D0RQG2 DNA polymerase I n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RQG2_9RICK Length = 925 Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/938 (40%), Positives = 578/938 (61%), Gaps = 37/938 (3%) Query: 9 LILVDGSSYLYRAYHAFPPLT-NSAGEPTGAMYGVLNMLRSLIMQYK-------PTHAAV 60 L L+DGS Y++RAY+A PPLT S G P GA+ G NML S + + K PTH AV Sbjct: 7 LFLIDGSGYIFRAYYALPPLTRKSDGLPVGAVSGFCNMLYSFLEKAKAGNTMDTPTHLAV 66 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 +FD+ K FR+++++ YK +R P+DL Q + + VKA LP + + EADD+I T Sbjct: 67 IFDSARKNFRNDIYKDYKGNRSDAPEDLIPQFDYIRKAVKAFNLPSIEMLNYEADDLIAT 126 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL 180 +A+K + I + DKD+ QLV +++TM + +G EEV K+GVPPE +ID Sbjct: 127 YKEKAKKKKIKITIVSSDKDLMQLVDKETFMLDTMKDRHIGIEEVKEKFGVPPEKVIDVQ 186 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 +L GDS DNIPGVPG+G KTA L+ G LD L + + I R L NK Sbjct: 187 SLAGDSVDNIPGVPGIGVKTAAELINQFGSLDELLKKADTIKQPKRRQT------LLDNK 240 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEA--GKWLQ 298 + A +S +L T+K DV ++ E ++ E++ + EF + +E GK Sbjct: 241 KNALISRELVTLKCDVPIKEEIEDFILKPLDKEKIFNFLDEMEFSKIKKSIEQTYGKSSD 300 Query: 299 AKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTET 358 K A PQ+T+ E+ + I + + L+ + + + FA DTET Sbjct: 301 TLTKKETATPQKTNNKKES-----------GFHIIYEAQELEDLLKQADNQGYFAIDTET 349 Query: 359 DSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPD---QISRERALELLKPLLEDEKAL 415 +SL++ A+LVG+S AI A Y+PV H P+ QI + +++LKP LEDE Sbjct: 350 NSLNSQKADLVGISLAINENEAYYVPVGHKNKQDPNLKKQIKIKELVKVLKPYLEDETVK 409 Query: 416 KVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEE 475 KVGQN+KYD I YGIEL+ DTML SY L++ RH++D LA+ L H I F++ Sbjct: 410 KVGQNIKYDLKIFLKYGIELKSFE-DTMLLSYSLDAGVNRHNLDLLAKTHLDHDNIKFKD 468 Query: 476 IAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVP 535 + G GK+++TF+++ ++ A RYA EDADVTL+L+ ++ D + ++E +E+PLV Sbjct: 469 VVGTGKSEVTFDEVLIDNAYRYACEDADVTLKLY-NLFKDRIVKEKCFQIYETLEIPLVD 527 Query: 536 VLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG 595 VL+R+E NG+KID +L S + L LEKK ++++GEEFN++STKQL IL+EK Sbjct: 528 VLARMENNGIKIDQVILKKLSNSFSADLKTLEKKIYKLSGEEFNIASTKQLGDILYEKLK 587 Query: 596 IKPLKKTPGGAPSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGR 654 I KKT G +T+ VLE+LA PK++LE+R +KLK+TYTD LP I+ T R Sbjct: 588 ISGTKKTKKGNFATNVNVLEDLASKGNEFPKLVLEWRQKSKLKNTYTDSLPEYIDKNTKR 647 Query: 655 VHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIM 714 +HTS+ A T+TGRL+S DPNLQNIP++++EG+ IR AF++ + I+SADYSQIE+R++ Sbjct: 648 IHTSFLLAATSTGRLASADPNLQNIPIKSKEGKLIRSAFVSEKGSSIISADYSQIEMRVL 707 Query: 715 AHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLA 774 AH++ K L AF +DIH TA+++F ++ + + RR AKAINFG+IYG+S++GLA Sbjct: 708 AHVADVKELKKAFKNNEDIHNITASQIFECDIKKINEDMRRKAKAINFGIIYGISSYGLA 767 Query: 775 RQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGA 834 +Q+++ EA++++ YF+++P + +YM+ T ++ G+V+T+ R+ + P+I N Sbjct: 768 KQISVSNPEAEQFLFSYFKKFPEIRDYMQETLEFCRKNGFVQTMFNRKCHFPNINDKNHT 827 Query: 835 RRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVD 894 ++ ERAAINAP+QG AADII+ AMI +D + +++ + R+++Q+HDEL+ E D+ Sbjct: 828 LKSFQERAAINAPIQGAAADIIRFAMINIDKKILSKKIKSRLLVQIHDELLLETKDMDLK 887 Query: 895 AVAKQIHQLMENCTRLD----VPLLVEVGSGENWDQAH 928 ++I MEN D VPL+V+ S +NW+ AH Sbjct: 888 KEIQKIKNEMENAIDGDYNFSVPLIVDANSAKNWNDAH 925 >UniRef50_B2IJU1 DNA polymerase I n=25 Tax=cellular organisms RepID=B2IJU1_BEII9 Length = 1043 Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust. Identities = 436/1017 (42%), Positives = 585/1017 (57%), Gaps = 105/1017 (10%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGE-------PTGAMYGVLNMLRSLIMQ----YKPTH 57 + LVDGSS+++RAY F + A PTGA+ L I + KPTH Sbjct: 35 VFLVDGSSFVFRAY--FQSIRQDAKYNYRSDRLPTGAVRLFCTKLFQFIREGAADLKPTH 92 Query: 58 AAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDV 117 A++FD +FR E++ YKS+R P+DL Q + A V+A GL + EADD+ Sbjct: 93 LAIIFDKSENSFRKEIYPPYKSNRSEPPEDLIPQFPLMRASVRAFGLQPVEQDRYEADDL 152 Query: 118 IGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI----------LGPEEVVN 167 I T A +A G VLI + DKD+ QL+ P +++ + + +G EEVV Sbjct: 153 IATYATQAHALGAEVLIISADKDLMQLIGPGVSMYDPASGEAGAKGARQERRIGQEEVVA 212 Query: 168 KYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFR 227 +GV P+ +ID AL GDS+DN+PG G+G KTA L+ G LD L +I R Sbjct: 213 YFGVGPDKVIDVQALAGDSTDNVPGARGIGIKTAAQLINDYGDLDNLLKLAREIKQPKRR 272 Query: 228 GAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRW 287 T ++ + +S +L T+ DV +E+ L + P +L+ K EF Sbjct: 273 EILTEP----ESVGLIEISRKLVTLVRDVPVEIPLADLGLHAPEPHKLVAYLKALEFTTL 328 Query: 288 T-----------ADVE-------AGKWLQAKG-----AKPAA------------------ 306 T A VE A W G A+P A Sbjct: 329 TKRVAEAYGVDLAAVEPDPAFCGAAGWRGRNGEVLVEAEPKAGEGATEPAGAEASGEVAT 388 Query: 307 -----------KPQETSVADEAP---------EVTATVISYDNYVTILDEETLKAWIAKL 346 +P E + P E A + Y TI+ E L A IA Sbjct: 389 RSGPKRNARYGEPVEKAALGSGPGLFASARAAEGRAGTFEHSAYQTIVTLEALDAVIAAA 448 Query: 347 EKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAH------DYLDA----PDQI 396 +A + A DTET SLD + A+L GLS EPG A Y+PV H D + P Q+ Sbjct: 449 YEAGLLAIDTETTSLDPMLADLAGLSLCAEPGKAFYVPVGHTSGEGQDLFEGKGLLPGQL 508 Query: 397 SRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRH 456 LE LKPLLED LK+GQN+KYD +L +G+E+R + DT+L SY+L++ H Sbjct: 509 PIGVVLERLKPLLEDPSILKIGQNVKYDWIVLKQHGVEMRPLD-DTLLLSYVLDAGLTDH 567 Query: 457 DMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDL 516 MD L+E+ L HK I F +AG G+ + F ++A+++A YAAEDADVTL+L + P L Sbjct: 568 GMDVLSEKHLGHKPIPFSAVAGSGRTFIGFARVAIDKATEYAAEDADVTLRLWRVLKPRL 627 Query: 517 QKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGE 576 K V+E +E P++ VL+R+ER GV IDP +L S + +A E + +E+AGE Sbjct: 628 PAEKM-TTVYETLERPMIDVLARMERRGVAIDPPLLGRLSSDFAQDMARYEAEIYELAGE 686 Query: 577 EFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELA-LDYPLPKVILEYRGLAK 635 +FNL S KQL ILF K G+ KKT GA ST+ VLE+LA L IL++R LAK Sbjct: 687 KFNLGSPKQLGDILFGKLGLPGAKKTATGAWSTAAGVLEDLAEQGVDLAARILDWRQLAK 746 Query: 636 LKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA 695 LKSTYTD LP INP +GRVHTSY A T TGRLSS++PNLQNIPVRNE GR+IR+AFIA Sbjct: 747 LKSTYTDALPNYINPSSGRVHTSYALAATTTGRLSSSEPNLQNIPVRNEAGRKIRRAFIA 806 Query: 696 PEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRR 755 P +VSADYSQIELR++AH++ K L AFAE DIH TA+E+FG+P+E + SE RR Sbjct: 807 PPGRKLVSADYSQIELRLLAHIADIKSLKNAFAENLDIHAMTASEMFGVPVEGMPSEIRR 866 Query: 756 SAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYV 815 AKAINFG+IYG+SAFGLA QL IPR+EA Y+ YFER+PG+ YM+ T+ +A+E GYV Sbjct: 867 RAKAINFGIIYGISAFGLANQLAIPREEAAAYIKKYFERFPGIRAYMDDTKKKARENGYV 926 Query: 816 ETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVR 875 ET+ GR+ + P IK+SN + RA ERAAINAP+QG+AADII+RAMI ++A L AE+ + Sbjct: 927 ETIFGRKCHYPRIKASNPSERALNERAAINAPIQGSAADIIRRAMIHMEAALAAEKLSAQ 986 Query: 876 MIMQVHDELVFEVHKDDVDAVAKQIHQLMEN----CTRLDVPLLVEVGSGENWDQAH 928 M++QVHDEL+FEV D+V+A + ++M L VPL V+ + +NWD+AH Sbjct: 987 MLLQVHDELIFEVPDDEVEATIAVVRKIMVEAPLPAVHLSVPLQVDAKAAQNWDEAH 1043 >UniRef50_B0SCM1 DNA-directed DNA polymerase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SCM1_LEPBA Length = 942 Score = 706 bits (1821), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/927 (41%), Positives = 575/927 (62%), Gaps = 36/927 (3%) Query: 28 LTNS-AGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKTFRDELFEHYKSHRPPMPD 86 LTNS G P+GA++G ML L+ TH A FD + R++L+E YK+HR PMP+ Sbjct: 26 LTNSKTGLPSGAIFGFWRMLFKLLQDEHVTHIAFTFDPGTRLERNDLYEEYKAHRKPMPE 85 Query: 87 DLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKAGRPVLISTGDKDMAQLVT 146 DL+ QI+ ++ M++A+ P+ ++G+EADD+IG+L ++ K ++I + DKD+ Q++ Sbjct: 86 DLKPQIQKIYEMLQALEFPMYKINGIEADDIIGSLCKKFGKDFEEIVILSSDKDLYQVLD 145 Query: 147 PNITLINTMTNTI----LGPEEVVNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQ 202 NI ++ + P+ V G+ E + D++AL+GD+SDNIPGV G+GEK A Sbjct: 146 KNIHMLRGKRGVSEFEKIDPKWVKTNIGITKEQVTDYMALLGDASDNIPGVKGIGEKGAA 205 Query: 203 ALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTC 262 L+Q G L+T+Y + +K+ K++ KL +KE A+LS +LATI T+++L++ Sbjct: 206 KLIQEFGDLETIYKKIDKVKN------KSLIDKLIADKENAFLSRKLATIVTNLKLDIKK 259 Query: 263 EQLEVQQPAAEELLGLFKKYEFKRWTADV--EAGKWLQAKG-AKPAAKPQET-------- 311 L++ + + FK + D+ +AG + + G AK ++ + Sbjct: 260 SDLKLPNYYDPKKVQYFKDEGYNVLHRDLAKQAGIPIVSDGDAKEESETSKKTTKGKKES 319 Query: 312 ---SVADEAP----EVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNI 364 + AD + + +V++ +Y I + LK ++KL + DTET S D + Sbjct: 320 NTEASADGSKKGKTDAATSVVAKKSYKRIQSIDELKKIVSKLNSKKPISIDTETTSQDPM 379 Query: 365 SANLVGLSFAIEPGVAAYIPVAH-DYLDAPDQISRERALELLKPLLEDEKALKVGQNLKY 423 A L+G+SF+ EPGVA YI +H + + + S E +L++LKP+LED K+GQN+KY Sbjct: 380 MAELLGISFSEEPGVAYYIAFSHSESIYSHLLPSAEESLKILKPMLEDSNWKKIGQNIKY 439 Query: 424 DRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQ 483 D +L NYGIEL+GI FDTML SY+LN RH+MD +A +L +KTIT+EE+ G GK + Sbjct: 440 DLLVLKNYGIELKGIYFDTMLASYLLNPGERRHNMDDMAVDYLNYKTITYEELVGTGKKK 499 Query: 484 LTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQK--HKGPLNVFENIEMPLVPVLSRIE 541 I ++ YA EDAD+TLQLH + P + + HK +F +EMP++ L+ +E Sbjct: 500 QNLYDIDPDKVSEYACEDADITLQLHNVLSPKMDENIHK---KLFYEMEMPVLLTLADME 556 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 G+ +D + S ++ E EK H AG +FN++STK+LQT+LFE + KK Sbjct: 557 FEGIAVDKSYFESLSGTFDTKIKEHEKNIHFYAGRQFNVNSTKELQTVLFEDLRLPAEKK 616 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 T G ST VLE L +P+ +L R +KLKSTYTD LPL++NPKT R+HTSY+Q Sbjct: 617 TQTGY-STDHSVLESLQGTHPIIDDLLSIRKFSKLKSTYTDTLPLLVNPKTKRIHTSYNQ 675 Query: 662 AVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDK 721 + ATGRLSST+PNLQNIP+++EEGR +R+ FIA + Y I+S DYSQIELRIMAH S D Sbjct: 676 TIAATGRLSSTNPNLQNIPIKDEEGRLLRKGFIAKKGYEILSLDYSQIELRIMAHFSNDP 735 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 ++ A+ G DIH+ TAA +FG+P + VT + R AK +NF +IYG+++FGL+ L I R Sbjct: 736 NMIDAYNSGADIHKRTAAGIFGVPEDQVTPDMRNKAKVVNFSVIYGVTSFGLSNNLRISR 795 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 KEA+++++ YF Y GV YME K+ GYVETL GRR YLPDI SS+ A+R Sbjct: 796 KEAKEFIEKYFAAYKGVATYMEEIVEFCKQNGYVETLLGRRRYLPDIHSSHKMVSEGAKR 855 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 AIN+P+QGT+AD+IK AMI + ++ E R ++++QVHDELVFEV + + Sbjct: 856 VAINSPIQGTSADMIKIAMIQIHEKIKKESFRSKLLLQVHDELVFEVDPKEKKEFFQMAK 915 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQAH 928 + ME+ +L VP++V+ G NWD+AH Sbjct: 916 EEMESAMKLKVPIVVQGKFGGNWDEAH 942 >UniRef50_D1R879 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R879_9CHLA Length = 896 Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust. Identities = 389/922 (42%), Positives = 552/922 (59%), Gaps = 38/922 (4%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA-KGK 67 L ++D S +LYR+Y A +TN GE T A+YG + + L + P H VFD Sbjct: 10 LYVLDASGFLYRSYFAIRNMTNKQGESTNALYGFIRSVLKLFKDFNPEHLVCVFDGPNNA 69 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 R EL+ +YK+HR MP DLR QIE MG+P L+V VEADD +GT+A+ AE+ Sbjct: 70 KKRLELYPNYKAHRSAMPPDLRYQIEWAQDFCSLMGIPYLSVPEVEADDTMGTVAKWAEQ 129 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMT-NTILGPEEVVNKYGVPPELIIDFLALMGDS 186 G + T DKDMAQLV P++ L+NT NTIL + ++GVPP ++D LA+ GD+ Sbjct: 130 QGAITYLCTSDKDMAQLVNPHVFLLNTHKDNTILDAASIEKEWGVPPSQMVDLLAMTGDA 189 Query: 187 SDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLS 246 SDNIPG+ G GEKTA ALL+ G LD + A PE++ G K L+ ++A +S Sbjct: 190 SDNIPGLTGFGEKTAAALLRQFGSLDYILAHPEEVPG------KKKQETLQTEADLARIS 243 Query: 247 YQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAA 306 L TI VE+ + P + L + + F L+ G + Sbjct: 244 RDLVTIDLSVEIPQEIAFYKKTDPVIDPLKTFYARMNF---------NSLLRELGQE--- 291 Query: 307 KPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISA 366 +P E +V E V YV + + E A + L FDTET + + A Sbjct: 292 EPVEAAVEAEKETV--------EYVLVDEPEAFDALLKNLSSEKQICFDTETTDIQPLKA 343 Query: 367 NLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRG 426 LVG+ F I P A Y+P+ ++ ++R LE +KPL E+ G N+KYD Sbjct: 344 ELVGIGFGIHPKKAWYVPLN-------GKLGKQRVLEGVKPLFENSAIGFYGHNVKYDWH 396 Query: 427 ILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTF 486 +L N GI+++ I FDT+L SYILN+ + +H ++ LA + TI E+ GKGKN L+ Sbjct: 397 VLQNEGIQIQNICFDTILASYILNAHSRQHSLEVLALEYFGKVTIPISELIGKGKNVLSM 456 Query: 487 NQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVK 546 + +E Y ED D T +L + L K + LN++ IE+PL+ VL+++ER G+ Sbjct: 457 RDVPIERVTEYCCEDVDFTCRLKEVLEKQL-KERDLLNLYHQIELPLLVVLAKMERRGIY 515 Query: 547 IDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGA 606 +D L S+ELT L L++ + +AGEEFNL+S KQ+ +LF K GI KKT G Sbjct: 516 VDIPYLEQLSKELTQELKTLQESIYTMAGEEFNLNSPKQVSELLFIKLGIPAPKKTATGH 575 Query: 607 PSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTAT 666 STS EVLE L DYPL ILEYR L KL+STY D LP + P+T R+H++++Q+V AT Sbjct: 576 -STSAEVLEFLKNDYPLAGKILEYRLLEKLRSTYVDALPSQVIPRTHRIHSTFNQSVAAT 634 Query: 667 GRLSSTDPNLQNIPVRNEEGRRIRQAFI-APEDYVIVSADYSQIELRIMAHLSRDKGLLT 725 GRLSS DPNLQNIP+R EEGR+IR AF E + +SADYSQIELR++AHLS+D L+ Sbjct: 635 GRLSSQDPNLQNIPIRTEEGRKIRGAFRPEKEGWSFLSADYSQIELRLLAHLSQDPVLMA 694 Query: 726 AFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQ 785 AF +DIH TAA +F +PLE V+ EQR AKAINFG+IYG AFGLAR+L I K+A Sbjct: 695 AFQNNEDIHTYTAASMFEIPLEQVSKEQRYQAKAINFGIIYGQQAFGLARELGIEVKQAS 754 Query: 786 KYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAIN 845 K++ +YF+RYP + EY+++++ A+ G TL GR +P+I S N RAAAER A+N Sbjct: 755 KFITMYFQRYPKIKEYLDQSKENARATGKSVTLTGRERIIPEILSKNMQIRAAAERLAVN 814 Query: 846 APMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLME 905 P+QGTAAD+IK AM+ +D ++ + + MI+Q+HDEL+FE+ +++ ++ + ++M+ Sbjct: 815 TPLQGTAADLIKMAMLKMDEEIEKQHLKGFMILQIHDELIFEIPDEEISLFSQLVPEVMQ 874 Query: 906 NCTRLDVPLLVEVGSGENWDQA 927 + L+V L+V++ G+NW + Sbjct: 875 SVMLLNVSLVVDINIGKNWKEC 896 >UniRef50_Q1V0V5 DNA polymerase I n=3 Tax=Candidatus Pelagibacter RepID=Q1V0V5_PELUB Length = 924 Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust. Identities = 378/933 (40%), Positives = 578/933 (61%), Gaps = 35/933 (3%) Query: 11 LVDGSSYLYRAYHAFPPLT-NSAGEPTGAMYGVLNMLRSLIMQ-------YKPTHAAVVF 62 L+DGS Y++RAY+A PPLT S G P GA+ G +ML L+ KPTH AV+F Sbjct: 12 LIDGSGYIFRAYYALPPLTRKSDGLPVGAVSGFCSMLFKLLEDSKSNENLQKPTHFAVIF 71 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 DA KTFR+E++ YK++R PDDL Q E + V A LP + + EADD+I T Sbjct: 72 DAARKTFRNEIYSDYKANRSEAPDDLAPQFEYIRKSVVAFNLPSVDLPNYEADDLIATYV 131 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLAL 182 + G V I + DKD+ QL ++ + + M N + PE++V K+GV PE +ID +L Sbjct: 132 EQILAKGAKVTIVSSDKDLMQLYRKDVRIFDPMKNKFITPEDIVTKFGVGPEKVIDVQSL 191 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 GDSSDN+PGVPG+G KTA L+ G L+ L ++I R L +NK+ Sbjct: 192 AGDSSDNVPGVPGIGVKTAAELINKYGTLEKLLDNAQEIKQNKRRET------LIENKDK 245 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A +S +L T+ D +E E+ +++ +L ++ EF R + V + A G Sbjct: 246 AIISKKLVTLMKDAPVERKLEEFHLKKIDKNKLYKFLREMEFNRLLSSV-----ISAYG- 299 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 +P E + + PE IS NY I +E+ + WI + E+A A DTET SLD Sbjct: 300 EPLL---EETAKETKPEKKHQNISKKNYHLITNEKEIDEWINEAEEAGELAIDTETSSLD 356 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 +LVG+S + + G A YIP+ H + + +E ++ LKPLLED+ K+GQN+K Sbjct: 357 AHQTDLVGISLSTKIGKACYIPIGHKFKGC---LKKETVIKKLKPLLEDKSVKKIGQNIK 413 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 +D +L +GI + + DTML SY+L++ RH+MD+L+E L+HKTI+F+EI G GK Sbjct: 414 FDFIVLYKHGINMNSME-DTMLMSYVLDAGKNRHNMDTLSEIHLQHKTISFKEIVGTGKK 472 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 ++ F+ + L++A YAAEDAD+T +L+ K++ K + N++E E PL+ +L+ +E Sbjct: 473 EINFSDVELDKAMEYAAEDADITYRLY-KIFSKNLKLEKLTNIYEIFEKPLIKILAFMEI 531 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 G+KID K L SE+ ++++LEK+ +I+ ++FN++S KQL I++ I LKKT Sbjct: 532 EGIKIDNKFLKVLSEKFEKKISKLEKEVFKISKKKFNIASPKQLGEIIYNDLKIAVLKKT 591 Query: 603 PGGAPSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 G+ +T+ VLE+LA + PK+IL++R ++KLK+TY+D LP INP T RVHTS+ Sbjct: 592 RKGSFATNASVLEDLAFKGHEFPKLILDWRQVSKLKNTYSDALPEHINPNTKRVHTSFLL 651 Query: 662 AVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDK 721 A T TGRL+S+DPNLQNIP+++E+G+ IR+AFIA + + ++SADY+QIE+RI+A L+ K Sbjct: 652 AATTTGRLASSDPNLQNIPIKSEDGKDIRKAFIAEKGFTLISADYNQIEMRILADLAEVK 711 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 L AF+ +DIH TA++VF + ++ V + RR AKAINFG+IYG+S +GLA+Q+N+ Sbjct: 712 ELKKAFSNNEDIHSLTASQVFNVDIKKVDQDMRRKAKAINFGIIYGISQYGLAKQINVSN 771 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 EA ++++ YF ++P + YM+ T ++ GYV + GRR + I N R ER Sbjct: 772 HEADEFLNAYFLKFPEIKIYMDNTIKFCRKSGYVTNIFGRRSHFNGINDKNFNVRNFQER 831 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQA-EQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 AAINAP+QG+A++I++ AMI ++ ++ + + ++++Q+HDEL+FEV +V + + I Sbjct: 832 AAINAPIQGSASEIMRLAMIRLNKKFESIKNNKSKILLQIHDELIFEVPVKEVKNITEII 891 Query: 901 HQLMENCTRLDV-----PLLVEVGSGENWDQAH 928 M + T D+ PL V+V +G+NW H Sbjct: 892 KDEMTSVTESDLHTFSTPLTVDVNTGDNWGILH 924 >UniRef50_D0XR83 DNA polymerase I n=2 Tax=Alphaproteobacteria RepID=D0XR83_9CAUL Length = 994 Score = 698 bits (1801), Expect = 0.0, Method: Compositional matrix adjust. Identities = 412/960 (42%), Positives = 563/960 (58%), Gaps = 44/960 (4%) Query: 5 PQNPLILVDGSSYLYRAYHAFPPLT-NSAGEPTGAMYGVLNMLRSLIMQYK----PTHAA 59 P L L+D S+Y++RAYHA PPLT S G P GA+ G NML L+ K PTH A Sbjct: 43 PAVRLWLIDASAYIFRAYHALPPLTRKSDGLPVGAVQGYCNMLWKLLKDMKGADGPTHLA 102 Query: 60 VVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIG 119 +FD KTFR+ L++ YK++R P+DL Q + +A G+ + + G EADD+I Sbjct: 103 AIFDHSEKTFRNALYDQYKANRSAPPEDLVPQFPLVRDATRAFGVHCVELPGYEADDLIA 162 Query: 120 TLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDF 179 T A + AG +I + DKD+ QL+ P++ + + M + L + V+ K+GV P+ +ID Sbjct: 163 TYACKVRDAGGECVIVSSDKDLMQLIGPSVVMWDPMKDRRLAEDAVMEKFGVTPDKMIDL 222 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 AL+GDS DN+PG PG+G KTA LL G LDTL +I R L Sbjct: 223 QALIGDSVDNVPGAPGIGPKTAAQLLDEYGDLDTLLERAGEIKQPKRR------ETLINF 276 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 ++ LS QL + D + V+ P + L + EF+ V GK Sbjct: 277 RDQILLSRQLVRLTCDAPAPEPIDDFRVRDPDPQTLADFLETMEFRSLLRRVGDGKLAGH 336 Query: 300 KGAKPA-AKPQETSVADEAPE-----VTATV----ISYDNYVTILDEETLKAWIAKLEKA 349 G+ A A+P S +P V+A V + +D Y I D L A+IA+ +A Sbjct: 337 DGSAFAPARPAPLSAPVISPRYAPQAVSADVEKQSVDHDAYHCIRDLADLDAFIARATEA 396 Query: 350 PVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDY--------------LDAP-- 393 V FDTETD+L A L G+S AI P A Y+P+ H++ DA Sbjct: 397 GVVGFDTETDALSATHAGLCGVSLAIGPNDACYVPLTHEHPPVEGAGGLDFGGDTDARPP 456 Query: 394 -DQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSV 452 DQ+ + L LK LLED LKV QN KYD ++A GI + I DTML SY+L Sbjct: 457 LDQLDKPTVLARLKGLLEDPGVLKVVQNGKYDLAVMARRGIRVAPID-DTMLISYVLEGG 515 Query: 453 AGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKM 512 H MD L+ L H+ I F+ +AG GK Q +F + L+ A YAAEDADVTL+L + Sbjct: 516 LHGHGMDELSRLHLGHEPIPFKSVAGTGKAQKSFKHVELKPATCYAAEDADVTLRLWRIL 575 Query: 513 WPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHE 572 P L + V+E +E + VL+ +E G+++DP L S E LR+AELE +AHE Sbjct: 576 KPRLATER-LATVYETLERGMPAVLADMELRGIRVDPARLRRLSSEFGLRMAELEAQAHE 634 Query: 573 IAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRG 632 IAG FN+ S +Q+ ILF + + KKT G T LE LA + LP+V+L++R Sbjct: 635 IAGRPFNVGSPRQIGEILFGELNLPGGKKTASGQWETGAATLEGLAETHALPRVLLDWRQ 694 Query: 633 LAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQA 692 L+KLK TYTD L ++P+T RVHTSY A TGRL+S+DPNLQNIP+R E GR+IRQA Sbjct: 695 LSKLKGTYTDALVAAMDPQTDRVHTSYQLAAATTGRLASSDPNLQNIPIRTETGRQIRQA 754 Query: 693 FIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSE 752 FIA + +V++SADYSQIELR++AH+ L AF G DIH ATA+E+FG+P+ + E Sbjct: 755 FIAKDGHVLISADYSQIELRLLAHIGDIPELKRAFKAGIDIHTATASEMFGVPVADMDPE 814 Query: 753 QRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQ 812 RR AKAINFG++YG+SAFGLA QL I + EA Y+ YFER+PG+ YM+ TRA+ + Sbjct: 815 TRRRAKAINFGIVYGISAFGLANQLGIDQGEAGAYIKTYFERFPGIRTYMDATRAEVRSL 874 Query: 813 GYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQP 872 G+V T+ GR++++P I S +GA R ERAAINAP+QG AADII+RAMI + L+A Sbjct: 875 GFVSTVFGRKIHIPAIASKSGAERQFGERAAINAPIQGAAADIIRRAMIRMPGALEAAGL 934 Query: 873 RVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTR----LDVPLLVEVGSGENWDQAH 928 +M++QVHDELVFE + +V+A I ++ME L VPL+V+ + +NWD+AH Sbjct: 935 ETKMLLQVHDELVFEAPEAEVEAAIPLIKRIMEGAAEPAVALSVPLVVDARAAKNWDEAH 994 >UniRef50_Q11NX3 DNA polymerase I n=11 Tax=Bacteria RepID=Q11NX3_CYTH3 Length = 946 Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust. Identities = 403/960 (41%), Positives = 567/960 (59%), Gaps = 57/960 (5%) Query: 9 LILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L L+D + +YRA+ AF P S G TGA++G N L ++++ KPTH V FD +G Sbjct: 4 LFLLDAMALIYRAHFAFSKNPRVTSTGISTGAVFGFTNSLLEILLKEKPTHIGVAFDLQG 63 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 TFR + F YK++R P+D+ I ++ +++ M +P+L V G EADD++GT ++ A Sbjct: 64 PTFRHDNFTEYKANRQEQPEDISVAIPYIYRLLEGMNIPILGVPGYEADDIVGTFSKIAP 123 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLIN--TMTNT--ILGPEEVVNKYGVPP-ELIIDFLA 181 G V + T DKD QLV ++ L M N I +V+ K+ + + + D L Sbjct: 124 PLGFDVYMMTMDKDYMQLVNEHVFLYRPAYMGNDVEIYDINKVLAKFNIKEVDQVRDILG 183 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 L GD+ DNIPG+PG+GEKTAQ L+ G ++ L +++ G AA+ Sbjct: 184 LQGDTVDNIPGIPGIGEKTAQKLIADFGSVENLIKNADQLKGKQKENVINFAAQ------ 237 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRW--------TADVEA 293 LS +LATI +V +E E L V++ E L LF + EF+ ++ E Sbjct: 238 -GLLSKELATIHCEVPIEFDEEALRVKEYNIEALDQLFDELEFRTLKKRLFGNSSSASET 296 Query: 294 GKWLQAKGAKPAAKPQETSVA---------------DEAPEVTATVIS-------YDNYV 331 K ++ K K +A T DE E T++ +D YV Sbjct: 297 EKKMETKATKKSAAVSSTGQMGLFGMEAAETITEEFDEKGESKETIVRDTIDTVLHDYYV 356 Query: 332 TILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLD 391 + E ++ L + F FDTET SL+ + A LVGL+ + A YIP Sbjct: 357 VDTEAEIVRLTNLLLLQES-FCFDTETTSLNALEAELVGLAISFRAKEAYYIPFT----- 410 Query: 392 APDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNS 451 DQI +R L+LL+P E KVGQNLKYD +L Y + G FDTML Y+L Sbjct: 411 -SDQIQTQRILDLLQPAFEKSSITKVGQNLKYDLLVLKKYNFAIAGPLFDTMLAHYLLEP 469 Query: 452 VAGRHDMDSLAERWLKHKTITFEEIAGK-GKNQLTFNQIALEEAGRYAAEDADVTLQLHL 510 RH MD+LAE +L + ++ E++ GK G Q T + +E YAAEDAD+T QL+ Sbjct: 470 -EMRHGMDTLAEVYLNYTPVSIEQLIGKKGAKQGTMRDVEIEAIKEYAAEDADITFQLY- 527 Query: 511 KMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKA 570 K + L K + +F +EMPL VL+ +E GVKID + L S L + +EK+ Sbjct: 528 KFFSPLVKDQNLNPLFNEVEMPLSEVLADMELEGVKIDTQALSEFSSLLQTEITAVEKEI 587 Query: 571 HEIAGEEFNLSSTKQLQTILFEKQGIKP-LKKTPGGAPSTSEEVLEELALDYPLPKVILE 629 +E AG +FN+SS KQL ILF+K + P KKT G +T E+VL +L D+P+ IL+ Sbjct: 588 YEHAGVQFNISSPKQLGEILFDKLKLDPNAKKTKTGQYATGEDVLTKLDSDHPILANILD 647 Query: 630 YRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRI 689 YR KLKSTY D LPL++ K GRVHTS++QAV ATGRLSST+PNLQNIP+R + G+ I Sbjct: 648 YREFQKLKSTYVDALPLLLG-KDGRVHTSFNQAVAATGRLSSTNPNLQNIPIRTDRGKEI 706 Query: 690 RQAFIAPE-DYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLET 748 R+AF+A + D+VI+SADYSQIELRIMA S+D+ +L AF +G DIH TA++VF +P+E Sbjct: 707 RRAFVARDNDHVILSADYSQIELRIMAAFSKDESMLNAFRKGVDIHSTTASKVFKVPIED 766 Query: 749 VTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQ 808 VT++ RR AK +NFG+IYG+SAFGL+++L+IPRKEA + + YF +P V YM+ Sbjct: 767 VTADMRRKAKMVNFGIIYGISAFGLSQRLSIPRKEAAEIITAYFTEFPAVKAYMDACVNS 826 Query: 809 AKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQ 868 A+E YVET+ GRR +L DI S N R AER AINAP+QG+AAD+IK AMI + W++ Sbjct: 827 AREVEYVETILGRRRFLRDINSRNMTMRGFAERNAINAPIQGSAADMIKVAMIRIHDWMK 886 Query: 869 AEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 E + +M++QVHDEL+F+ HKD++D + Q+ M+ LDVP+ V +G GENW +AH Sbjct: 887 KENLKSKMVLQVHDELLFDAHKDEIDLLKTQVEIFMKEAIALDVPMEVGMGIGENWLEAH 946 >UniRef50_Q04Q27 DNA-directed DNA polymerase n=4 Tax=Leptospira RepID=Q04Q27_LEPBJ Length = 921 Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/933 (41%), Positives = 563/933 (60%), Gaps = 28/933 (3%) Query: 9 LILVDGSSYLYRAYHAF--PPLTNS-AGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 L+++DG ++++RAY+AF LTNS G+P+GA +G ML L+ Y PTH A+ FD Sbjct: 4 LLIIDGHAFVFRAYYAFGASNLTNSKTGKPSGATFGFFKMLFKLLQDYTPTHVAMTFDPG 63 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 G R + FE YK++R PMP+DLR QI+ + ++ +G +L + G EADD+IGTL Sbjct: 64 GPLERGKTFEDYKANRKPMPEDLRPQIKEVMETLEKIGFKVLKMEGHEADDIIGTLCETY 123 Query: 126 EKAGRPVLISTGDKDMAQLV-TPNITLINTMTNTI----LGPEEVVNKYGVPPELIIDFL 180 + +LI +GDKD+ QL+ NI ++ + V + G+ + I D++ Sbjct: 124 RTIAKEILIFSGDKDLYQLLEKKNIKMLRGKKGVTEFVEIDSAWVKEELGIDVKQIPDYM 183 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 ++GD+SDNIPGV G+G+K A LLQ LD +Y KI S + KL + K Sbjct: 184 GIVGDTSDNIPGVKGIGDKGASKLLQEYKTLDGIYKNLNKIKNPSIQ------TKLSEQK 237 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADV--EAGKWLQ 298 E AYLS QLATI+ D++L +T + +E ++ + FK + + D+ AGK + Sbjct: 238 ENAYLSKQLATIRRDLKLGITEKDIETPDYKSDHAIVYFKSQGYNVLSKDLAKSAGKEV- 296 Query: 299 AKGAKPAAKPQETSVADEAPEV-TATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTE 357 P + ADE+ E T V Y I E L L K+ V + DTE Sbjct: 297 -----PKDAEVTDATADESAETKTIPVGEKGTYKLITTVEELSKICRGLPKSRVLSVDTE 351 Query: 358 TDSLDNISANLVGLSFAIEPGVAAYIPVAHD-YLDAPDQISRERALELLKPLLEDEKALK 416 T S + A L+G+SF+ + Y+ V + L S E E L P+L + K Sbjct: 352 TTSPNPAMAELLGISFSNQEKTGFYVSVKNSASLFQDKSFSLEEIREHLGPVLSSQ-VPK 410 Query: 417 VGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEI 476 VGQN+KYD +L N+G L I FDTML SY++ RH+MD LA+ L + TIT++++ Sbjct: 411 VGQNIKYDLIVLENHGFILNNIQFDTMLASYVIQPEGRRHNMDVLAKDLLNYDTITYDDL 470 Query: 477 AGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPV 536 G GK + I E+ YAAEDAD+T +L+ +++ K G + NIEMPL+ V Sbjct: 471 VGTGKKKKELTDIDPEQVAEYAAEDADITFRLY-QIFRKKIKESGVEPILRNIEMPLISV 529 Query: 537 LSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGI 596 L+++E+ G+ +D + + + LE + H AG FN++STK+LQ ILF+ + Sbjct: 530 LAKMEKTGIALDVPYFEELARDFDREIRHLESEIHRQAGRSFNIASTKELQKILFDDLKL 589 Query: 597 KPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVH 656 K +KKT G ST EVLEEL ++P+ + +L+YR KLKSTY D LP M+NP+TGR+H Sbjct: 590 KTVKKTQTGY-STDHEVLEELLGEHPIVEKLLDYRKYTKLKSTYVDALPKMVNPRTGRIH 648 Query: 657 TSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPED-YVIVSADYSQIELRIMA 715 TSY+Q + ATGRLSSTDPNLQNIP+R+ EGR +R+ F D Y I+S DYSQIELRIMA Sbjct: 649 TSYNQTIAATGRLSSTDPNLQNIPIRDREGRLLRKGFTVDSDEYEILSLDYSQIELRIMA 708 Query: 716 HLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLAR 775 H+S+D +L A+ G DIH TAA ++G+P + VT E R AK +NF +IYG++ +GL+R Sbjct: 709 HISKDPAMLEAYNHGLDIHIRTAAALYGVPEKEVTPEMRDKAKVVNFSVIYGVTPYGLSR 768 Query: 776 QLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGAR 835 L IPR EA+ +++ Y +YPGV YM+ A++ GYV+TL GRR + DI S++ + Sbjct: 769 NLRIPRDEAKSFIERYMIQYPGVKSYMDSMVEFAEKNGYVQTLTGRRRPIVDINSTHKSA 828 Query: 836 RAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDA 895 + AA+R AIN+P+QGT+AD+IK AMI + ++ + R RM++QVHDELVFEVHK + + Sbjct: 829 KEAAKRVAINSPVQGTSADMIKIAMINIHEDIEKKHYRSRMLLQVHDELVFEVHKKEKEE 888 Query: 896 VAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 + + MEN LD+P+LVE G NWD+AH Sbjct: 889 FKISMKKHMENAMPLDLPILVEGKFGVNWDEAH 921 >UniRef50_B2RLP5 DNA polymerase I n=2 Tax=Porphyromonas gingivalis RepID=B2RLP5_PORG3 Length = 926 Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust. Identities = 397/941 (42%), Positives = 565/941 (60%), Gaps = 40/941 (4%) Query: 9 LILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L L+D + ++RAY+AF P +S G TGA++G L ++ + P H AVVFD G Sbjct: 5 LFLLDAYALIFRAYYAFIRSPRIDSTGRDTGAVFGFALTLLDILEKESPEHIAVVFDPPG 64 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 +FR + YK+ R P+ +R + + M+ A +P + V EADD IGTLA++AE Sbjct: 65 GSFRHREYAEYKAQREETPEGIRIAVPLIKEMLAAFRIPAVEVPDFEADDTIGTLAKQAE 124 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTN---TILGPEEVVNKYGVP-PELIIDFLAL 182 + G V + T DKD QLV+ I + + GP EV K+G+ P +ID+L L Sbjct: 125 EQGLAVRMVTPDKDFGQLVSERIKIYRPKSGGGYETWGPAEVCEKFGLSIPGQMIDYLGL 184 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 +GDSSDNIPG G+G KTA+ LL G +D +YA +++ G +A K+++ +E Sbjct: 185 VGDSSDNIPGCKGIGAKTAEKLLAEYGSIDGIYAHQDELKG-------AVAKKIQEGEEQ 237 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEA--------- 293 S LATI+TD + E P + F EF+ +E+ Sbjct: 238 TRFSRYLATIRTDAPIVFDSEAYRRTSPDMAAVRECFAALEFRTLLKRLESTPADAPATD 297 Query: 294 --GKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPV 351 +QA+ P E + A P T + ++ Y + EE + I P Sbjct: 298 LFAGMVQAQ-EPPTDLFGEGTDATGLPLKKLTDVPHE-YTILETEEEIADCIRMFSSTPC 355 Query: 352 FAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLED 411 F+FDTETDS D + AN+V ++ E G A +IP+ D ++I + R L+LL+PL D Sbjct: 356 FSFDTETDSKDALRANIVAITLCAESGRAFFIPLPED-----EEIGKRR-LDLLRPLFAD 409 Query: 412 EKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTI 471 KVGQN+KYD +L+ YGIE+RG FDTM+ Y+L RH+MD +AE L ++TI Sbjct: 410 TAIGKVGQNMKYDIQVLSRYGIEVRGQLFDTMIAHYLLFPDL-RHNMDEMAETLLGYRTI 468 Query: 472 TFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEM 531 + ++ G K ++ Q+ L+ YA EDAD+T QL+ ++ L + G ++FE+IEM Sbjct: 469 HYSDLVGSDKQEVHIRQVPLQNLADYAMEDADITWQLYERLNAMLSE-AGMTSLFESIEM 527 Query: 532 PLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILF 591 PLVPVL +ER+GVK+D +VL + L + +E + + +AG FN++S Q+ T+LF Sbjct: 528 PLVPVLVDMERSGVKLDTEVLRRTASRLGEEMQRIEDEIYRLAGHSFNINSPSQVGTVLF 587 Query: 592 EKQGI--KPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMIN 649 E+ I KP KKT G+ ST+EE+L +L +P+ ++IL+YRG+ KL STY + LP M Sbjct: 588 EELQITEKP-KKTKSGSYSTNEEILVKLQEKHPIVRLILDYRGIKKLLSTYVEALPEMRY 646 Query: 650 PKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVI-VSADYSQ 708 P G++HTS++Q V TGRLSS++PNLQNIP+R E GR +R AF+ D I +SADYSQ Sbjct: 647 PD-GKLHTSFNQTVATTGRLSSSNPNLQNIPIRTEVGRGLRAAFVPDNDECIFMSADYSQ 705 Query: 709 IELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGM 768 IELR+MAHLS D+ L+ AF G+DIHRATA++++ LPL VT + RR AK NFG+IYG+ Sbjct: 706 IELRLMAHLSEDESLIQAFLHGEDIHRATASKIYRLPLVEVTDDMRRRAKTANFGIIYGI 765 Query: 769 SAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDI 828 SAFGL+ +LNI R EA+ ++ YF YPGV YM+R+ A+AK QGYV TL GR+ +L DI Sbjct: 766 SAFGLSERLNISRTEAKALIEGYFASYPGVKAYMDRSIAEAKRQGYVTTLFGRKRFLRDI 825 Query: 829 KSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEV 888 S+N R AER AINAP+QG+AAD+IK AMI + + + R RMI+QVHDEL F V Sbjct: 826 NSANAVVRGYAERNAINAPIQGSAADLIKLAMIRIHEEITERKLRSRMILQVHDELNFNV 885 Query: 889 HKDDVDAVAKQIHQLMENCT-RLDVPLLVEVGSGENWDQAH 928 + + V + + ME L VPL+ E+G G NW +AH Sbjct: 886 LRPEAAEVRELVRSCMEGVMPSLRVPLIAEIGEGANWLEAH 926 >UniRef50_B9KYZ1 DNA polymerase I n=4 Tax=Thermomicrobia (class) RepID=B9KYZ1_THERP Length = 917 Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust. Identities = 395/933 (42%), Positives = 551/933 (59%), Gaps = 54/933 (5%) Query: 9 LILVDGSSYLYRAYHAFPP-LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 L+LVDG YRAYHA PP L SAGEPT ++G +ML ++ ++P + V FD G+ Sbjct: 10 LVLVDGHGLAYRAYHALPPTLATSAGEPTHVVFGFASMLLEVLNDFEPDYVIVCFDT-GR 68 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 +FR +L+E YK+HRP PDDL+ Q+E + ++ A+G+P++ G EADD+IGTLA A Sbjct: 69 SFRQQLYEEYKAHRPETPDDLKHQLERIRQLLDALGIPIVTREGYEADDLIGTLAARATA 128 Query: 128 AGRPVLISTGDKDMAQLVTPNITLI-----NTMTNTILGPEEVVNKYGVPPELIIDFLAL 182 G VLI TGD D+ QLV ++ +I + + V+ +YG PPE + ++ AL Sbjct: 129 NGLEVLIVTGDTDLLQLVDEDVRVILPGRQRFGDYRVYDRQAVIERYGFPPERLPEYKAL 188 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 +GD SDNIPGVPG+GEKTA L+Q L+ + +++ R A L +E Sbjct: 189 VGDPSDNIPGVPGIGEKTATRLIQRFSSLEEMLDRIDEVEPPRLREA------LRAARET 242 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 S +LATI D ++ L EQ E +L LF++ EF+ + + K A Sbjct: 243 VLASRRLATIVRDADITLDLEQARFGDFDRERVLQLFRELEFRSLVPRLPQPRQPVRKTA 302 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 PA++ + +L + L + LE FA D ET +L Sbjct: 303 APASQRR----------------------AVLTDADLSDLVRDLETCQAFALDVETTALH 340 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 + A+LVG++ A P + Y+P+ H D Q+ E+ L+ L P L + + + K Sbjct: 341 PMYADLVGIALATAPDRSYYVPLGHTTGDT--QLDIEQVLQRLAPFLRHPEKQRYAHHGK 398 Query: 423 YDRGILANYGIELRGIAFDTMLESYIL--NSVAGRHDMDSLAERWLKHKTITFEEIAGKG 480 YD +L G I FDTM+ +Y+L N+V + LA L + E+ G+G Sbjct: 399 YDALVLERAGFPRPHIDFDTMIAAYLLGENAVG----LKELAFTKLGWEMEEITELIGRG 454 Query: 481 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI 540 K QLT ++ + +YA D + T +L + P L+ H L +F IE+PL+ VL + Sbjct: 455 KKQLTMDRAEIARVTQYACADVEATYRLVEVLRPQLEAHNQ-LRLFTEIELPLIDVLIDM 513 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK 600 E+ G+ ID L S L +L LE++ +E+AG FN++S +QL T+LF++ G+ K Sbjct: 514 EKAGIAIDVPYLEQLSIMLDGQLHALERRIYELAGHPFNINSPQQLSTLLFDELGLPRGK 573 Query: 601 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 +T G S S+EVLE L +P+ + ILEYR L KLKSTY D LP ++P+TGRVHT +H Sbjct: 574 RTKTGY-SVSQEVLENLRDTHPIVEAILEYRQLLKLKSTYVDALPRQVHPQTGRVHTIFH 632 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP---------EDYVIVSADYSQIEL 711 Q V ATGRLSS+DPNLQNIP R E G +R+AFIA E +++S DYSQIEL Sbjct: 633 QTVAATGRLSSSDPNLQNIPARGELGLAVRRAFIADNRPGYRIADEPILLLSVDYSQIEL 692 Query: 712 RIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAF 771 R+MAH S+D LL AFAEGKDIH ATA+EVFG+PL+ VT E RR AK +NFG++YGM A+ Sbjct: 693 RLMAHFSQDPALLRAFAEGKDIHAATASEVFGVPLDAVTPEMRRIAKVVNFGIMYGMQAY 752 Query: 772 GLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSS 831 GLAR + R++AQ++++ YF+R+PGV Y+E TR +A E GYVETL GRR YLP+I SS Sbjct: 753 GLARDTGMSRQDAQRFIEAYFQRFPGVARYLEETRRRAAELGYVETLFGRRRYLPEITSS 812 Query: 832 NGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKD 891 N ARR AAER A+N P+QGTAADI+K AMIAV L R RM++QVHDELV EV + Sbjct: 813 NPARRQAAERMAVNMPLQGTAADIMKLAMIAVHRALAERGLRSRMLLQVHDELVLEVPES 872 Query: 892 DVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 ++ + + M L VPL V+ +G NW Sbjct: 873 ELATTTELVTTRMSRVVELSVPLEVDAKAGPNW 905 >UniRef50_Q2GBP7 DNA polymerase I n=10 Tax=Alphaproteobacteria RepID=Q2GBP7_NOVAD Length = 945 Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust. Identities = 415/955 (43%), Positives = 561/955 (58%), Gaps = 51/955 (5%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYK----PTHAAVVFDA 64 L LVDGS+Y++RAYH PPLTN G P GA+YG ML L PTH AV+ D Sbjct: 7 LYLVDGSAYIFRAYHRLPPLTNPRGVPVGAVYGYTTMLWKLAEDLHKADGPTHLAVILDK 66 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 G +FR++L++ YK++RPP P+DL Q + +A L + +EADD+I + AR Sbjct: 67 AGTSFRNDLYDQYKANRPPPPEDLVPQFPLIRDATRAFSLACIEEDALEADDLIASYARA 126 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNIT------LINTMTNTILGPEEVVNKYGVPPELIID 178 A G V I + DKD+ QLV T +++TM N + EVV K+GVPPE + D Sbjct: 127 ATLRGWDVTIVSSDKDLMQLVGKCATGGGCIDMLDTMKNQRIDIPEVVEKFGVPPEKVGD 186 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 LALMGDS DN+PG+ G+G KTA L+Q G L++ A A + + K + +EQ Sbjct: 187 VLALMGDSVDNVPGIRGIGPKTATKLIQEHGDLESALA-----AAPTMKAGKLRESLIEQ 241 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 E+A LS L +K D L + E ++ Q + L +++ F ++ GK Sbjct: 242 -AEMARLSRVLVALKEDCPLPVPIEDFKLGQIPRDPLAAFLEEHGFTSLLRRLDDGK--G 298 Query: 299 AKGAKPAAKPQ--ETSVADEAPEVTATVI------SYDNYVTILDEETLKAWIAKLEKAP 350 + G K P + A APE + Y + L+ WIA+ +A Sbjct: 299 SPGPKTQLNPAKPDNKAAPAAPEGNRQALPSWPAPDLSAYACVQSMGELQQWIARAFEAR 358 Query: 351 VFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHD----YLDAPDQISRERALELLK 406 V A DTET +LD + A+LVG+S A+ P A YIP+ H + + P Q+ R AL LK Sbjct: 359 VVAIDTETSALDAMRADLVGVSLALGPNDACYIPLGHGGSDMFAEKPLQVDRAEALAALK 418 Query: 407 PLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGR-------HDMD 459 PLLE + LKVGQN+KYD ILA GI + I DTM+ S+ L+ AGR H MD Sbjct: 419 PLLESDAVLKVGQNIKYDLNILARQGIMVSPID-DTMVMSFCLD--AGRSETGLAGHGMD 475 Query: 460 SLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKH 519 L+ER L H T+ F+E+ G GK ++F ++ L +A RYAAEDADVT +LH P L Sbjct: 476 ELSERHLLHTTMKFKELCGTGKKAISFAEVPLADATRYAAEDADVTWRLHRLFQPRLAGE 535 Query: 520 KGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFN 579 G +++ ++ PL+PV++ +ERNG+K+D + L S E ++A LE HE G F Sbjct: 536 GG-TRIYQKVDRPLIPVVAMMERNGIKVDRERLSGLSTEFAAQIARLEGVIHEKCGMSFT 594 Query: 580 LSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALD-YPLPKVILEYRGLAKLKS 638 + S KQL +LF+K G K KK G ST + VLE LA + ++LE+R L+KLKS Sbjct: 595 IGSPKQLGEVLFDKLGYKGGKKGKTGQYSTDQSVLEGLAAQGAEVATLVLEWRQLSKLKS 654 Query: 639 TYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPED 698 TYTD L INP TGRVHTSY TGRLSS +PNLQNIP+R E GR+IR AF+A Sbjct: 655 TYTDALQAAINPHTGRVHTSYSLVGAQTGRLSSNEPNLQNIPIRTEIGRQIRDAFVAEPG 714 Query: 699 YVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAK 758 V+++ADYSQIELR+ AH++ L AFA G+DIH TA E+FG TV + R AK Sbjct: 715 NVLLAADYSQIELRLAAHMADVPALKEAFAAGEDIHARTAMEMFG----TVDRDTRGRAK 770 Query: 759 AINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETL 818 INF ++YG+S +GL +L + EAQ +D YFER+PG+ Y+ T +E+GY ETL Sbjct: 771 TINFAILYGISRWGLGGRLGVSADEAQAMIDRYFERFPGIQRYIHETLESVRERGYSETL 830 Query: 819 DGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMI-AVDAWLQAEQPRVRMI 877 GR+ + P I S N A R +ERAAINAP+QGT+ADIIKRAM + A +A VRM+ Sbjct: 831 FGRKTWFPRISSKNQAERQGSERAAINAPIQGTSADIIKRAMARMMPALTEAGLGHVRML 890 Query: 878 MQVHDELVFEVHKDDVDAVAKQIHQLM----ENCTRLDVPLLVEVGSGENWDQAH 928 +QVHDELVFE+ + DV+A I ++M E +L VPL VE+G+G +W AH Sbjct: 891 LQVHDELVFELPQGDVEAAKPVIERVMATAAEPAVKLSVPLGVEIGTGLSWGAAH 945 >UniRef50_C6W4A8 DNA polymerase I n=44 Tax=Bacteria RepID=C6W4A8_DYAFD Length = 963 Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust. Identities = 405/976 (41%), Positives = 565/976 (57%), Gaps = 68/976 (6%) Query: 5 PQNPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 P + L L+D + +YRA+ AF P S G T A++G N L ++ + KPTH V F Sbjct: 4 PIHKLFLLDAMALIYRAHFAFIKAPRITSKGLNTSAVFGFTNTLLEVLQKEKPTHIGVAF 63 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 D TFR FE YK+ R P+D+ I + +++ M +P+L + G EADD+IGT+A Sbjct: 64 DTAAPTFRHVQFEAYKAQREAQPEDITVAIPLVKRLLRGMCIPILELDGYEADDIIGTIA 123 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTM----TNTILGPEEVVNKYGVPP-ELII 177 +EA + G V + T DKD QLV I + +LG +++++++ + + +I Sbjct: 124 KEASREGFEVYMMTPDKDYGQLVEQYIHIYKPAFLGKGAEVLGVQQILDRWQIQRIDQVI 183 Query: 178 DFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLE 237 D L LMGD+ DNIPG+PGVGEKTAQ L+Q ++ L +I G + K+ Sbjct: 184 DILGLMGDAVDNIPGIPGVGEKTAQKLIQEYDTIENLITHAGEIKG-------KLGEKIR 236 Query: 238 QNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWL 297 +N + A LS QLATI V + E L + P AE + LF + EFK + G+ Sbjct: 237 ENFDKAVLSKQLATIDCKVPVPFDAEDLTICSPNAELIAELFDELEFKTLKTRILGGQPG 296 Query: 298 QAKGA---KPAA-------------------------KPQETS--VAD-EAPEVTATVI- 325 + GA +PA+ +P S +AD E E T+ + Sbjct: 297 GSAGALSPRPASAQAPARKNAKGQLDIFGNPTEEIGQQPAAVSGDLADGELTEDTSEIRI 356 Query: 326 ---------SYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIE 376 ++ Y T+ E + + L F FDTET SLD A LVGLSF+ Sbjct: 357 PTSKRTIDNTFHRYHTVDTPELMTSLAHYLSLQDAFCFDTETTSLDTTDAELVGLSFSYL 416 Query: 377 PGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELR 436 G A YIPV D A + + RA+ E+E K+GQN+KYD +L NYGIE+ Sbjct: 417 AGEAFYIPVPADRQQAEEIVGYFRAV------FENENIEKIGQNIKYDMLVLKNYGIEVH 470 Query: 437 GIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK-GKNQLTFNQIALEEAG 495 G DTML Y+L RH MD LA +L ++ ++ + GK G Q +A+ E Sbjct: 471 GKLSDTMLAHYLLEP-DKRHGMDILAASYLNYEPVSITSLIGKKGGKQGNMRDVAIPEIT 529 Query: 496 RYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNH 555 +YA EDAD+T QLH +L K +F +EMPL VL+ +E GV++D L Sbjct: 530 QYAGEDADITFQLHSIFSRELPKVNAA-KLFNEVEMPLTKVLASMENTGVRLDINALKEM 588 Query: 556 SEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGI--KPLKKTPGGAPSTSEEV 613 S L L + E + +E AG+ FN+SS KQL +LFEK + KP KKT G +T EE+ Sbjct: 589 SAVLESDLRQTESEIYEAAGQSFNISSPKQLGEVLFEKMKLIEKP-KKTKTGQYATGEEI 647 Query: 614 LEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTD 673 L +L ++ + + IL+YR L KLKSTY D LP M++ +TGR+HTSY+QAV ATGRLSST+ Sbjct: 648 LSDLEANHLIARKILDYRELQKLKSTYVDALPTMVSSRTGRIHTSYNQAVAATGRLSSTN 707 Query: 674 PNLQNIPVRNEEGRRIRQAFIAPE-DYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKD 732 PNLQNIP+R GR IR+AF+ D+ I+SADYSQIELRIMA S D + AF +G+D Sbjct: 708 PNLQNIPIRTPRGREIRKAFVPDSADFQILSADYSQIELRIMAAFSGDASMTEAFNQGRD 767 Query: 733 IHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYF 792 IH TA++VF +PLE VTS+ RR +K +NFG+IYG+SAFGLA++L IPR EA + + YF Sbjct: 768 IHATTASKVFQVPLEEVTSDMRRKSKMVNFGIIYGISAFGLAQRLGIPRGEASEIIRAYF 827 Query: 793 ERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTA 852 E +P V YM++ A+E+ YVET+ GRR YLPDI S N R AER AINAP+QG+A Sbjct: 828 EEFPAVKGYMDKVVNDAREREYVETILGRRRYLPDINSRNQTNRGYAERNAINAPIQGSA 887 Query: 853 ADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDV 912 AD+IK AMI + ++ E+ + RMI+QVHDELVF+ H ++D + +++ +LM N + V Sbjct: 888 ADMIKVAMINIHDFMAKEKLKSRMILQVHDELVFDAHYSEIDLLKERVDELMRNAIPMAV 947 Query: 913 PLLVEVGSGENWDQAH 928 + +G G NW +AH Sbjct: 948 RMETGIGVGANWLEAH 963 >UniRef50_A9G0B1 DNA polymerase I n=3 Tax=Sorangium cellulosum 'So ce 56' RepID=A9G0B1_SORC5 Length = 900 Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust. Identities = 404/923 (43%), Positives = 552/923 (59%), Gaps = 42/923 (4%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 L LVD S Y++RAYHA PL++ +GEPT A YG + ML L+ + KP + V D+ GKT Sbjct: 17 LYLVDLSGYVFRAYHAISPLSSPSGEPTHATYGTVAMLTKLVDERKPAYLGVAMDSPGKT 76 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FRDEL YK+HRPP P DL Q+ +V+A +P+ G+EADD++ A++ Sbjct: 77 FRDELDPRYKAHRPPPPPDLGVQMSRCREIVEAYRIPIFIQEGLEADDLVAVAVARAKER 136 Query: 129 GRPVLISTGDKDMAQLVT-PNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSS 187 G V+I++ DKD+ QLV + L + M + + G EVV K+GVPPE + D LAL+GD+S Sbjct: 137 GLRVVIASSDKDLMQLVDGEQVMLWDAMRDKVYGHPEVVAKFGVPPEQVRDLLALVGDTS 196 Query: 188 DNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSY 247 DN+PGVPGVG KTA LL G L +Y ++ R L+QN+ A LS Sbjct: 197 DNVPGVPGVGLKTAAELLAQFGSLSAIYERIGEVKKPRIR------ESLQQNEADARLSQ 250 Query: 248 QLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAK 307 +L T+ + L E L L LF + F R+ V A Sbjct: 251 KLVTLDGGAPVSLDLETLRYGGADTGRLRELFTELGFSRFLKAVRA-------------- 296 Query: 308 PQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISAN 367 PE TA +Y T E L+ + A A D S + +SA+ Sbjct: 297 ----------PEPTARAATYRVLTT---REELEGFARSARAAGRLALDVLATSREPMSAH 343 Query: 368 LVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGI 427 + G++ A EPG A Y+P+ H YL AP Q+S ++ PLL D + KVG ++K+ I Sbjct: 344 VCGVALACEPGQAVYVPLGHRYLGAPAQLSMSDIDAVMGPLLADPELPKVGHDVKFCEVI 403 Query: 428 LANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK--GKNQLT 485 L + I L G++FDTML SY+L+ G++ + LAER L K T +E+A K G+ Q Sbjct: 404 LLRHRIGLVGVSFDTMLASYLLDP-EGKNQLHELAERELGAKMQTLDEVAPKRRGQAQRA 462 Query: 486 FNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGV 545 ++I L EA Y A ADV L L ++ P L+ K ++ IE+PL VL+ +E GV Sbjct: 463 LDEIELGEASSYGAAFADVALSLTDRLRPRLRAEKLE-DLLVQIELPLSAVLAEMELTGV 521 Query: 546 KIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGG 605 +DP+ L ++T LA LE+KA EI G + NL+S KQL+ +LF++ ++ +KT G Sbjct: 522 LVDPQALAQLGAQMTTELAALEQKAREIVGHDINLASPKQLEAVLFDELKLRSQRKTKTG 581 Query: 606 APSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTA 665 ST +VLE L+ ++P P V+LE+R +AKLK TY D LP +++P TGR+HT + QAV A Sbjct: 582 R-STDADVLEALSEEHPFPGVVLEHRAIAKLKGTYVDALPRLVHPGTGRIHTRWGQAVAA 640 Query: 666 TGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLT 725 TGRLSS DPNLQNIP+R E GR IR+AF+AP VIVSADYSQIELR++AHLS+D L+ Sbjct: 641 TGRLSSQDPNLQNIPIRTELGRMIRRAFVAPPGSVIVSADYSQIELRVLAHLSKDPVLVD 700 Query: 726 AFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQ 785 AF G+D+H TA E+FG+ VT+E RR +K INFG+IYGM LA++L+I R EA Sbjct: 701 AFRTGQDVHVRTAMEIFGVDQAGVTAEMRRRSKTINFGVIYGMGESALAKRLDISRAEAA 760 Query: 786 KYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAIN 845 +++D YF RY GV E+ME T A+AK V TL GRR LPD++SS+ RRA AER A N Sbjct: 761 RFIDAYFARYRGVHEFMEGTMAEAKRSESVRTLLGRRRLLPDLRSSDRMRRAQAERIAQN 820 Query: 846 APMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLME 905 P+QGTAAD++K AM+ V + P RM++ VHDEL FEV + VD ++ + ME Sbjct: 821 TPIQGTAADLLKLAMVRVP---RPVVPGARMVLTVHDELAFEVPAEAVDEAKAKVREAME 877 Query: 906 NCTRLDVPLLVEVGSGENWDQAH 928 + LDVPL+V+VG G W AH Sbjct: 878 SVFPLDVPLVVDVGHGPTWADAH 900 >UniRef50_B0MYJ0 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MYJ0_9BACT Length = 959 Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust. Identities = 399/974 (40%), Positives = 570/974 (58%), Gaps = 72/974 (7%) Query: 9 LILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L LVD + +++ Y+AF P+ N AG T ++G LR + + P V FD KG Sbjct: 4 LFLVDAYALIFKYYYAFMGRPMRNRAGMNTSVVFGFTKFLRDIQKREHPDLLGVAFDPKG 63 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 +FR E+F YK++R P+D+ + + +V+AM +P+L V G EADDVIGTLA + Sbjct: 64 GSFRREIFPEYKANRAETPEDILLSVPYVKRIVEAMCIPVLEVPGYEADDVIGTLAHKGV 123 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNT---ILGPEEVVNKYGVP-PELIIDFLAL 182 +AG V + T DKD QLV N + N I+G E + KYG+ P+L+ D LAL Sbjct: 124 EAGYDVFMVTPDKDYGQLVCDNCKIYKQKGNDGIEIVGREAIREKYGIENPQLVRDILAL 183 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 GD+SDNIPGVPG+GEKTA L+Q G ++ + ++I K+ + + Sbjct: 184 WGDASDNIPGVPGIGEKTACKLVQEWGTVENILQNADRIKS-------RQGEKIAEWGDK 236 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVE---------- 292 L+ +L TI DV ++ E L V P +EL LF + +F+ + D+ Sbjct: 237 LLLAKRLTTICLDVPIDFREEDLTVCAPRIDELKALFAELDFRMFLNDLTNLAPAEPLPE 296 Query: 293 -----AGKWL------------------QAKGAKPAAKPQETSVAD-----------EAP 318 A L Q PAA E+ +D E+ Sbjct: 297 GPRQAAQTQLAEVARAKSAAAKKAALAGQGDLFAPAADSGESPASDRESASSDEQTAESE 356 Query: 319 EVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPG 378 E + Y + + + L+A + ++ P F FDTET D + +VGLS A+ P Sbjct: 357 EFATAQTTPHAYTIVRNAQELEAVLREVAACPEFCFDTETTGFDIFNDRIVGLSLAVRPY 416 Query: 379 VAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGI 438 A YIP ++ + L++PL D K K+GQN+K+D +LA G+E+RG Sbjct: 417 EAWYIPF--------NESNTAEYAALIRPLFADGKIAKIGQNIKFDLMVLARLGVEIRGR 468 Query: 439 AFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYA 498 +DTM+ Y+L+ RH+MD+LA R+L ++ I+ + GKG QLT + I+LE YA Sbjct: 469 LYDTMILHYLLDP-ESRHNMDALAMRYLNYRPISITSLIGKGARQLTMDMISLERVAEYA 527 Query: 499 AEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEE 558 AEDADVTL+L +WP +++ ++ IE P++ VL+ IE GV+ID + L ++ E Sbjct: 528 AEDADVTLRLKQVLWPKVEELDLA-GLYLEIEEPMIAVLAEIEMAGVRIDSEALAEYAVE 586 Query: 559 LTLRLAELEKKAHEIAGE-EFNLSSTKQLQTILFEKQGI--KPLKKTPGGAPSTSEEVLE 615 L L +LE +A E N++S +QL +LF K I KP K T ST EE L+ Sbjct: 587 LNKTLNDLEGDIRRLADEPSLNVNSARQLGEVLFGKLRIAEKP-KMTKTKQFSTEEEYLQ 645 Query: 616 ELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPN 675 A Y + ILEYRG+ KL STY + LPL++NP TG++HTS++QAVTATGRLSST+PN Sbjct: 646 TFAHKYEIVDKILEYRGVKKLLSTYVEALPLLVNPVTGKIHTSFNQAVTATGRLSSTNPN 705 Query: 676 LQNIPVRNEEGRRIRQAFIAPED-YVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIH 734 LQNIPVR+E GRRIR+AFI +D ++++SADYSQ+ELR+MAHLS D+ L+ AF G+D+H Sbjct: 706 LQNIPVRDELGRRIRKAFIPSDDEHLLLSADYSQVELRLMAHLSGDESLIAAFEHGEDVH 765 Query: 735 RATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFER 794 ATAA +FG + V S++RR AK NFG+IYG+SAFGL+++L+IPRKEA++ ++ YF Sbjct: 766 AATAARLFGKEVAEVDSDERRKAKTANFGIIYGISAFGLSQRLDIPRKEAKEIIEGYFAS 825 Query: 795 YPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAAD 854 YP V EYM+R +AK GYV T+ GRR YL DI S N R AER A+NAP+QG+AAD Sbjct: 826 YPKVKEYMDRVVEEAKRDGYVSTIFGRRRYLNDIASRNAVARGLAERNAVNAPIQGSAAD 885 Query: 855 IIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPL 914 I+K AMI V + E R ++I+QVHDELV ++ + + + V + + ME+ L V L Sbjct: 886 IMKIAMIRVSRRFREEGIRSKVILQVHDELVVDMLRSEQERVIAIVTEAMESAAALRVRL 945 Query: 915 LVEVGSGENWDQAH 928 +V+ G G+NW +AH Sbjct: 946 VVDCGVGDNWLEAH 959 >UniRef50_A0LIP7 DNA polymerase I n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LIP7_SYNFM Length = 902 Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/919 (42%), Positives = 561/919 (61%), Gaps = 28/919 (3%) Query: 11 LVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKTFR 70 LVDGSSY+YRAY+A LTNS G PTGA+ G ML ++ + KP + VVFDA G TFR Sbjct: 10 LVDGSSYIYRAYYAVSRLTNSRGFPTGAVLGFAQMLDKVVREKKPDYICVVFDAPGPTFR 69 Query: 71 DELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKAGR 130 E++ YK+ R P+D+ AQI + +V+ G+P + + G EADD+I TL A + Sbjct: 70 HEMYAPYKATRQKAPEDMIAQIPYIKDLVRFRGIPQMELPGYEADDLIATLTHWAVEQDI 129 Query: 131 PVLISTGDKDMAQLV-TPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSDN 189 V++ + DKD+ QL+ P + + + + EV ++YGVPP ++D+LAL+GDSSDN Sbjct: 130 EVVVVSSDKDLHQLIDDPVVRQWDPQKDRVFMEWEVEDRYGVPPGRMVDYLALVGDSSDN 189 Query: 190 IPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQL 249 +PGV G+G+KTA+ LLQ G LD +YA ++ S R KLE+++E A LS +L Sbjct: 190 VPGVKGIGDKTARQLLQEWGSLDRIYANLARVGSASVRD------KLEKHREEALLSRRL 243 Query: 250 ATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAKPQ 309 + + DV +E E P +L+GLF++ EF+ + K L A AA Sbjct: 244 VSFREDVPVERKLEAFAPGPPLKSQLIGLFEELEFRSLLDSLR--KELNAVEPAAAAPAG 301 Query: 310 ETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLV 369 T +DE L+ +L PV + ET D ++++L Sbjct: 302 RTK---------------HKIAGSMDE--LRTLAERLAGEPVVSIQVETTRKDAMASDLA 344 Query: 370 GLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILA 429 GLSF E A Y+P+ D + ++ AL L+P+L + K+G +LK + Sbjct: 345 GLSFGFEDDGAWYVPLGPDGSEGDGRLPAAVALAALEPVLGRSRPAKIGHDLKTAWIVFK 404 Query: 430 NYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQI 489 +GIELRGIAFDTM+ +Y+L+ + +D +A L ++E++ GKGK+Q+ F+ I Sbjct: 405 KHGIELRGIAFDTMVAAYLLDPGKQNYGIDRVAAECLGENIDSYEDVTGKGKSQVGFDTI 464 Query: 490 ALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDP 549 + A Y+ AD ++H + L + + +FE IE+PL+ VL+R+E G+ D Sbjct: 465 DIGRAAAYSCAAADAARRMHPVLKRKLDESR-LTELFEKIELPLITVLARMEFRGITADA 523 Query: 550 KVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPST 609 + L + S + L +++A E+FN+ S KQL ILFEK G++ +KKT G PST Sbjct: 524 EKLESLSIDFQKALDRTADTIYDLAKEKFNIQSPKQLAYILFEKLGLRVVKKTKSG-PST 582 Query: 610 SEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRL 669 VLEELAL++P+ +L +R LAKLK TY D L +INP+TGR+HTSY+Q V ATGRL Sbjct: 583 DMAVLEELALEHPIADHVLVFRTLAKLKGTYADALGKLINPRTGRIHTSYNQTVAATGRL 642 Query: 670 SSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAE 729 SS+DPNLQNIP+R EEGR+IR AFI ++++SADYSQIELRI+AH S+D+ LL AF + Sbjct: 643 SSSDPNLQNIPIRTEEGRKIRSAFIPAPGWLLLSADYSQIELRILAHCSKDEHLLEAFRD 702 Query: 730 GKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMD 789 +DIHR TAAE+FG+ VT E RR AK INFG+IYGM FGLA++L I K A+ +D Sbjct: 703 DEDIHRRTAAEMFGVSPIEVTPEMRRQAKTINFGIIYGMGPFGLAQRLRISTKTARTAID 762 Query: 790 LYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQ 849 YF+ Y GV +++ T A+ GY ETL GRR ++P+++S N R ER AIN P+Q Sbjct: 763 KYFQGYRGVRRFIDTTIELARRLGYSETLLGRRRFIPELQSRNKTIRQLGERLAINTPLQ 822 Query: 850 GTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTR 909 GTAAD+IK+AMI + L R M++QVHDELVFE ++++ A + + ++ME+ + Sbjct: 823 GTAADLIKKAMIDAEDALNGSGLRTVMLLQVHDELVFETPREELAAAQELVRRVMEDVWK 882 Query: 910 LDVPLLVEVGSGENWDQAH 928 LDVPL VE+G G+NW +AH Sbjct: 883 LDVPLKVELGWGDNWAEAH 901 >UniRef50_Q2LQV1 DNA polymerase I n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LQV1_SYNAS Length = 901 Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/926 (41%), Positives = 553/926 (59%), Gaps = 40/926 (4%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 ++ + LVDGS+YLYRA++A L+NS G PT A+YG NML L+ + KP + A+ FD K Sbjct: 12 KSTIYLVDGSNYLYRAFYAIRELSNSRGLPTNAVYGFTNMLIKLLRERKPEYIAITFDLK 71 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 G TFR E + YK+ R P+ L QI + +++ +P+L G EADD+IGTLA Sbjct: 72 GPTFRHETYAQYKATRKATPEALIPQIPYIKDIIRGFSIPILEQQGTEADDIIGTLACRF 131 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185 G V+I +GDKDM QL++P++ +I+TM + V ++GV PE + + L L GD Sbjct: 132 AGEGLKVIIVSGDKDMLQLLSPDVIMIDTMNDRTYDVAAVRERFGVDPEKVPEILGLTGD 191 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 SDNIPG+PG+G K A L++ G ++ + E++ R + + E A L Sbjct: 192 MSDNIPGIPGIGPKGALRLVEEYGSIEEILRNVERLRNPKLRDSVRVYG------EQALL 245 Query: 246 SYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPA 305 S LA I+T + L E+ +Q+P E L LF++ EF Sbjct: 246 SRDLARIRTGIPLTFDLEEARLQEPDREVLTRLFRELEFSSLL----------------- 288 Query: 306 AKPQETSVADEAPEVTATVISYDNYVTILDE-ETLKAWIAKLEKAPVFAFDTETDSLDNI 364 QE SV ++ DN T+L E + A++ L++ + S + + Sbjct: 289 ---QEFSVVEDCG---------DNSHTLLRTPEAVAAFMEPLKEGGFLVLEMVLSSSEPM 336 Query: 365 SANLVGLSFAIEPGVAAYIPVAHDYLD-APDQISRERALELLKPLLEDEKALKVGQNLKY 423 A L+G++ ++ G A YIP+ + + +S E+ +L P L D+K VG +LK Sbjct: 337 RAELIGVALGLDSGNAGYIPLEPGAAEKSASSLSEEQVFPVLFPFLADKKIALVGHDLKT 396 Query: 424 DRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITF-EEIAGKGKN 482 +L+ G++++ DTM+ +YILN +++ + + +L + +++ G Sbjct: 397 VLIVLSQKGVKVQNPLLDTMVAAYILNPARRGYELSEIVQDYLHRQVEPLRKKLVGGSSP 456 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 + + E +A + +L + +++ G +F+++EMPLV VL+ +E Sbjct: 457 KQSPASFPPERLRDFACRRVEAIGELASTLIEKMEE-TGLRELFDSVEMPLVAVLAAMEE 515 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 GV +D +L S+EL L+ E K + +AGE FN++S KQLQTILFEK + KKT Sbjct: 516 KGVLLDLHLLKEMSQELGHLLSLSEAKIYALAGERFNIASPKQLQTILFEKLNLPKGKKT 575 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 GG ST EVL LAL++ LP IL YR +AKLKSTY D LP +IN +TGR+HTSY+Q Sbjct: 576 KGGY-STDVEVLSNLALNHELPAEILAYRSMAKLKSTYIDALPSLINIRTGRIHTSYNQT 634 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKG 722 V ATGRLSS++PNLQNIP+R EG+RIRQAFIAP + IVSADYSQIELR++AHLS D Sbjct: 635 VAATGRLSSSNPNLQNIPIRTLEGKRIRQAFIAPPGWAIVSADYSQIELRVLAHLSEDPV 694 Query: 723 LLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRK 782 L+ AFA G+DIH TAA+VFG+ E + +E RR AK INFG++YGMSAFGL+R+L IP+K Sbjct: 695 LINAFAAGEDIHSRTAADVFGVFPEMINAEMRRQAKVINFGVLYGMSAFGLSRELGIPQK 754 Query: 783 EAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERA 842 +AQ Y+D YF++Y V Y++ QA+E+GYV TL RR YLP+I S N A R AER Sbjct: 755 QAQAYIDGYFKKYESVKTYLDGILQQARERGYVTTLLNRRRYLPEINSVNPAVRQLAERM 814 Query: 843 AINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQ 902 AINAP+QGTAAD+IK AM+ + ++ + + M MQVHDELVFEV +++ A+ + Q Sbjct: 815 AINAPIQGTAADLIKMAMLRIADLIREKGMKSAMTMQVHDELVFEVPQEEKIALMNLVRQ 874 Query: 903 LMENCTRLDVPLLVEVGSGENWDQAH 928 ME L VPL V++ SG NWD+AH Sbjct: 875 EMEGVVELKVPLKVDIASGRNWDEAH 900 >UniRef50_C8QY72 DNA polymerase I n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QY72_9DELT Length = 914 Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust. Identities = 392/941 (41%), Positives = 545/941 (57%), Gaps = 58/941 (6%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 + PL L+DGS+Y+YRAYHA PL+N+AG+PT A+YG L +I + P + A+ +D+K Sbjct: 4 REPLYLIDGSAYIYRAYHAIRPLSNAAGQPTHAVYGFTTTLLRVIREKTPRYLAIAYDSK 63 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 G FR E++ YK++RP MP DL QI + +V A + L +GVEADD+I AR Sbjct: 64 GPNFRHEIYPAYKANRPEMPADLACQIPYIKEVVSAYHITTLEQAGVEADDLIAAAARRL 123 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185 +P++I +GDKD+ QLV +TL + M +T + P V KY V P+ ++D+ AL+GD Sbjct: 124 AGPDQPLIIVSGDKDLLQLVNEWVTLWDPMQDTFMDPAAVAKKYQVSPQQLLDYFALIGD 183 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 SSDN+PGVPGVG KTA L+ G L+ L+A E+++ R KL +++ A L Sbjct: 184 SSDNVPGVPGVGPKTAAKLIDQFGSLEQLFANLEQVSAAKLR------EKLAAHRQDAQL 237 Query: 246 SYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPA 305 + +L +K D+EL + + + P ++L LF + EF R Sbjct: 238 ARRLIRLKDDLELPTSLDDYTLPPPDQDKLRQLFTELEFTRLIKS--------------- 282 Query: 306 AKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPV-FAFDTETDSLDNI 364 E+ A I+ D + I + L +A L P DTET SLD + Sbjct: 283 -------------ELQAEKIAADAFQLINSLDQLHELVAILAADPAPLVIDTETTSLDPL 329 Query: 365 SANLVGLSFAI------------------EPGVAAYIPVAHDYLD---APDQISRERALE 403 A LVG+S + E G Y+P+AH D A +Q+ Sbjct: 330 QAELVGISLTLAAPGSDESEAKASRTAAGENGACWYLPIAHRREDGSAAANQLPLAEVRR 389 Query: 404 LLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAE 463 L PLL D++ LK+G NLKYD +L + + L DTM+ SY+++ H +D L+E Sbjct: 390 ALAPLLADDRRLKLGHNLKYDLQVLHRHDLPLAPPLADTMIASYLIDPSRRSHGLDVLSE 449 Query: 464 RWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPL 523 L+ + +F E+ + + F +A A Y+ ED T L P L + + Sbjct: 450 ELLQRRLTSFAEVTDRDRRPEAFAHVAPAAAAAYSCEDVAATRLLWQLFQPKLAELELA- 508 Query: 524 NVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSST 583 +F +E+ L+P+L+R+ER G+ +D +VL + E + L L K +++AG EFN++S Sbjct: 509 ELFYQVEITLLPILARMERVGILLDGQVLKELAAEFSQELERLSSKIYQLAGVEFNINSP 568 Query: 584 KQLQTILFEKQGIKPLKKTPGGAP-STSEEVLEELALDYPLPKVILEYRGLAKLKSTYTD 642 +QL +LFE+ + +KT G ST LE LA + LP I+ R L+KLKSTY D Sbjct: 569 RQLGEVLFERLKLPHGRKTKGKTGYSTDIRELERLAAYHDLPAAIIAQRNLSKLKSTYVD 628 Query: 643 KLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIV 702 KL +INP GR+HTS++Q VTATGRLSS++PNLQNIPVR +EGRRIR AFIA + + Sbjct: 629 KLSTLINPADGRIHTSFNQTVTATGRLSSSNPNLQNIPVRTQEGRRIRGAFIAAPGHRFL 688 Query: 703 SADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINF 762 +ADYSQI+LR++AH S D LL AF + +DIHR TAAE+F + VT++ RR AK INF Sbjct: 689 AADYSQIDLRVLAHYSADPMLLEAFQQDQDIHRRTAAEIFRVNPAMVTADMRRVAKTINF 748 Query: 763 GLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRR 822 G+IYGMSAFGLA QL RKEAQ ++D YFE Y GV +ME QA+ G+V TL RR Sbjct: 749 GIIYGMSAFGLAEQLRCSRKEAQVFIDRYFELYRGVKTFMEEIVEQARRDGFVRTLLKRR 808 Query: 823 LYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHD 882 LP+I SSN RR AER AIN P+QGTAADIIK A IA D L+ + ++Q+HD Sbjct: 809 RQLPEINSSNKLRREFAERTAINTPIQGTAADIIKLAAIACDRELRRKNFNTEALLQIHD 868 Query: 883 ELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGEN 923 EL+FEV +D+ AV K + Q MEN L VPL V + SG N Sbjct: 869 ELIFEVPEDEQAAVGKLVQQAMENVMELTVPLRVNLKSGPN 909 >UniRef50_C1A3H5 DNA polymerase I n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A3H5_GEMAT Length = 984 Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust. Identities = 401/996 (40%), Positives = 569/996 (57%), Gaps = 87/996 (8%) Query: 2 VQIPQNP-LILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHA 58 V P P L L+DG + +YRA+ A PL+ S GE T +G+ + L+ L+ ++P Sbjct: 4 VTRPTAPRLFLIDGYALIYRAFFALLQRPLSTSRGENTSIAWGIASFLKRLLNTHQPELL 63 Query: 59 AVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQ----IEPLHAMVKAMGLPLLAVSGVEA 114 A V D+ G TFRDEL+ YK+ R + DDL+A ++ + ++ A +P+L+ G EA Sbjct: 64 AWVHDS-GATFRDELYPDYKATREKLTDDLQADFDQGLQRVLQLLAAYDIPVLSAPGFEA 122 Query: 115 DDVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLIN-------TMTNTILGPEEVVN 167 DDVIGT+A +AG V++ +GDKD QLV P + L+N ++ + +G E + Sbjct: 123 DDVIGTMAARGVEAGYNVVVVSGDKDFQQLVRPGVWLLNPGRGGPASVDESWVGVENGSD 182 Query: 168 KYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFR 227 + GVPPE +ID+LA++GD+SDN+PGV G+GEK A L+ G L+ + A E I R Sbjct: 183 RLGVPPERVIDYLAIVGDTSDNVPGVKGIGEKGAIELITQYGPLENILANVENITKKRPR 242 Query: 228 GAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRW 287 A L+Q + A LS QL TI DV + E+L V QP + L L+ + EF Sbjct: 243 EA------LQQYADSARLSKQLVTIHCDVPVPFESEKLTVGQPNTDALRALYLELEFTSL 296 Query: 288 TADVEAGKWLQAKGAKPAAKPQET----SVADEAP----------------EVTATVISY 327 DV GA P A T + AD AP E V++ Sbjct: 297 LKDV--------GGAVPVATSSGTGATSTAADVAPALPVPGRPAAPAVTLGESGVPVLAD 348 Query: 328 DNYVTILDEETLKAWIAKLEKAPVFAFDTETD-------SLDNISANLVGLSFAIEPGVA 380 YVT+ E L + ++ + P A DTET +D + + LVGLS A+ PG A Sbjct: 349 ARYVTVDTVEALATLLTRVREVPYIAIDTETVIEPGAPFDVDALRSRLVGLSIAVAPGEA 408 Query: 381 AYIPVAHDYLD------------------------APDQIS----RERALELLKPLLEDE 412 Y+P AH D AP+ ++ A L+ +LED Sbjct: 409 YYLPFAHRRDDGSGNLALLAGDTGTGIVGRRINAGAPEPVNLPPFDSDACAPLRAMLEDP 468 Query: 413 KALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTIT 472 K+ QN KYD +L + G+ + G+ FDTML SY+L+ H +D LA L H Sbjct: 469 SVTKIAQNAKYDLLVLRSSGVRVAGVGFDTMLASYVLDPGRRSHGLDLLALEQLGHTMTA 528 Query: 473 FEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMP 532 ++ + GKGK QL F+ ++ A Y+ ED D+T++L K+ P L +H L++F+ IE+P Sbjct: 529 YDTLVGKGKTQLPFDVAPVDTARDYSCEDVDITMRLRAKLEPMLAEH-ALLSLFQEIEVP 587 Query: 533 LVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFE 592 LV VL+ +E G+ ID + +E+ + AGEEFN++S +L+ ILFE Sbjct: 588 LVSVLAEMEWEGIAIDLDWFASLKARFAAERGRVEQAIYAEAGEEFNINSNPKLRAILFE 647 Query: 593 KQGIKPLKKTPGGAPSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINPK 651 K G+ P+KK PST VL+ELA + + LP +++EYR + KL+ TY D LP +++P+ Sbjct: 648 KLGL-PVKKKTATGPSTDASVLQELAEEGHVLPTLLMEYREIFKLEGTYIDALPRLVHPR 706 Query: 652 TGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIEL 711 R+HTSY Q V+ATGRLSS DPNLQNIP+R E GR IR+ F+ E + ++SADYSQIEL Sbjct: 707 DRRLHTSYSQTVSATGRLSSHDPNLQNIPIRRELGRDIRRGFVPREGWRLLSADYSQIEL 766 Query: 712 RIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAF 771 R++AHLS D ++AF G DIHR TAA +FG+PLE VTSE R AK INF IYG A Sbjct: 767 RVLAHLSADPAFVSAFKAGGDIHRQTAAIIFGVPLEDVTSEMRARAKTINFATIYGQGAH 826 Query: 772 GLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSS 831 L+RQL I EA+ +++ YFER+ GV ++++ A+ +GYVETL RR Y+P++K Sbjct: 827 ALSRQLRITNAEAKAFIETYFERFAGVRGFLDQCVVDARARGYVETLFKRRRYIPELKER 886 Query: 832 NGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKD 891 N RA ER A NAP+QG+AAD+IK AMI V + AE RM++QVHDELVFE+ + Sbjct: 887 NFNIRAFGERVAQNAPIQGSAADLIKIAMINVRNAIDAEGLASRMLLQVHDELVFELPVE 946 Query: 892 DVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 + D ++ + + ME L+VPLLVE+G G +W A Sbjct: 947 EADTLSALVKREMEGAAVLNVPLLVEMGLGTDWVSA 982 >UniRef50_Q6MEQ2 Probable DNA polymerase I n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MEQ2_PARUW Length = 891 Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust. Identities = 380/924 (41%), Positives = 540/924 (58%), Gaps = 37/924 (4%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 + L ++D S Y+YR+Y A +TN+ GE T A++G + + LI + PTH VFD Sbjct: 2 DKLYILDASGYIYRSYFAIRQMTNARGESTNALFGFIRSVLKLIKDFNPTHLVAVFDGPN 61 Query: 67 KT-FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 + R EL+ YK+HR MP DL QI + MG+P L V GVEADD +G++A+ A Sbjct: 62 NSQKRTELYPAYKAHRKEMPKDLLYQILWSQRFCQLMGIPELMVPGVEADDTMGSIAKWA 121 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMT-NTILGPEEVVNKYGVPPELIIDFLALMG 184 I T DKDM QLV+ I ++NT N I+ V ++GV P +ID+LA++G Sbjct: 122 ATLNTTAYICTSDKDMCQLVSNQILILNTFKDNLIIDANGVKEQFGVMPAQMIDYLAIIG 181 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 D+SDNIPG+ G G KTA LL+ G LD + P +++G K L KE Sbjct: 182 DASDNIPGLTGFGPKTAADLLEKFGSLDYILEHPLEVSG------KKKQDTLISEKEKVL 235 Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304 LS +L + T V + ++ PA + L + + F ++EA K Sbjct: 236 LSKKLVIVDTTVSFPNQEDFFKLTSPAYQSLKEFYAEMNFSSLIRELEAVK--------- 286 Query: 305 AAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNI 364 + ++ E V+ Y + DEETL I+ L + DTET L + Sbjct: 287 ------SGISFSDLESQNEVV----YQLVNDEETLVNLISYLSQQKEICLDTETTDLRPL 336 Query: 365 SANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYD 424 A LVG+ +EP A YIP+ Q++ + L LKPLLE+ G N KYD Sbjct: 337 EAQLVGIGLGVEPKKAWYIPLN-------GQLNGDFVLSQLKPLLENPSIGFYGHNFKYD 389 Query: 425 RGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQL 484 +L N+ I + I+FDT+L SY+LNS +H +D LA I +E+ GKGKNQL Sbjct: 390 YHVLRNHNISVANISFDTILASYLLNSHKRQHSLDHLALELFDKVKIAIQELIGKGKNQL 449 Query: 485 TFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNG 544 +AL++ Y ED D T++L + L++ K ++ ++E+PL+ VL+++ERNG Sbjct: 450 NMKNVALDKICHYCCEDVDYTIRLKNILLSQLEERKLT-SLLFDLELPLLSVLAQMERNG 508 Query: 545 VKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPG 604 + ID L + S+ + + LE+ + +AGE FNL+S KQL ILF K GIKP KK Sbjct: 509 IFIDTAYLKHLSQFIGQEIHCLEQNIYALAGEIFNLNSPKQLSQILFHKLGIKPPKKIAT 568 Query: 605 GAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVT 664 G ST+ EVLE L YP+ + +LEYR L KL+STY + LPL +N KTGR+H +++Q++ Sbjct: 569 GH-STNAEVLEILKHVYPIAEKLLEYRTLEKLRSTYVNSLPLQVNAKTGRIHCNFNQSMA 627 Query: 665 ATGRLSSTDPNLQNIPVRNEEGRRIRQAFI-APEDYVIVSADYSQIELRIMAHLSRDKGL 723 ATGRLS DPNLQNIPVR E GR+IR+AF ED+ +SADYSQIELR++AHLS D L Sbjct: 628 ATGRLSCQDPNLQNIPVRTEVGRQIREAFRPEKEDWSYLSADYSQIELRLLAHLSEDPVL 687 Query: 724 LTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKE 783 + AF +DIH+ TA+ +F +PL+ V+SEQR AKA+NFGLIYG AFGLA +L I K Sbjct: 688 IKAFLSNEDIHKYTASLIFDVPLQQVSSEQRYQAKAVNFGLIYGQQAFGLAHELGIDTKT 747 Query: 784 AQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAA 843 A ++ YFERY V E++E + A+E G T+ GR LP+I+S N RA A+R A Sbjct: 748 AAAFIQRYFERYGKVKEFLEACKQSARETGKAVTMYGRERLLPEIRSQNAMIRATADRFA 807 Query: 844 INAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQL 903 +N P+QGT AD+IK AM+ ++ L E+ + MI+Q+HDEL+FEV ++++++ + Sbjct: 808 VNTPIQGTQADLIKMAMLKINKLLIQEKKKGFMILQIHDELIFEVPNQELESISHLVKNT 867 Query: 904 MENCTRLDVPLLVEVGSGENWDQA 927 MEN L VPL+V + G+NW + Sbjct: 868 MENIINLKVPLIVNIHIGKNWKEC 891 >UniRef50_Q1NVM3 DNA polymerase A n=2 Tax=Deltaproteobacteria RepID=Q1NVM3_9DELT Length = 910 Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/937 (41%), Positives = 540/937 (57%), Gaps = 53/937 (5%) Query: 8 PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 P+ L+DGS+Y++RAYHA PLTN G PT A+YG L +I + + H AVVFDA+G Sbjct: 6 PVYLIDGSAYIHRAYHAITPLTNRDGLPTHAIYGFTTTLLRVIREGEARHLAVVFDARGP 65 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 FR +L+ YK++RP MP+DL Q+ + +V A + L G EADD+I R Sbjct: 66 NFRHQLYPQYKANRPAMPEDLACQLPYIKEIVAAYRITSLEREGFEADDLIAAAGRRLAA 125 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSS 187 AG V+I +GDKD+ QLV PNIT + M + +L V KY +PP ++D+ AL+GDSS Sbjct: 126 AGHRVVIVSGDKDLLQLVGPNITFWDPMGDRLLDAAAVEAKYQLPPAKLLDYFALIGDSS 185 Query: 188 DNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSY 247 DNIPGVPGVG KTA L++ G LD L A E+++ R KL +++ A L+ Sbjct: 186 DNIPGVPGVGPKTAVKLIKEFGDLDQLLANLEQVSAPKLR------QKLADHRDAALLAR 239 Query: 248 QLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAK 307 +L +K D+E+ T E+ +P +L LF + +F R LQ++ A Sbjct: 240 ELIRLKDDLEIPATPEEYRQPEPDRGKLRQLFSQLDFSRL---------LQSEAAA---- 286 Query: 308 PQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISAN 367 + D A ++ T E L +L A DTET SL+ + A Sbjct: 287 ---EELDDSAFQLLTTT------------EQLPTVCEELRAAGGLVIDTETTSLNALRAE 331 Query: 368 LVGLSFAIEPGVAA--------------YIPVAHDYLD---APDQISRERALELLKPLLE 410 LVG+S P A Y+P+ H D AP Q+ + L PLL Sbjct: 332 LVGISLCPLPAAATAADNSQPTPPPTAWYLPIGHRLADGSPAPGQLPLAAVQQQLAPLLG 391 Query: 411 DEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKT 470 D + LK+G NLKYD +L ++G+EL D+M+ SY+++ H +D L+ L+ + Sbjct: 392 DPQLLKLGHNLKYDLQVLKSHGLELAAPLADSMIASYLIDPGRRSHKLDDLSSELLERQL 451 Query: 471 ITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIE 530 +F E++ + F + A RY+ +D + L P LQ+ G ++ +E Sbjct: 452 TSFAEVSAGDRRPEAFAYVEPAAACRYSCQDVVASRLLWELFAPQLQQ-LGLDSLLHEVE 510 Query: 531 MPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTIL 590 M L+P+L+R+ER G+ +DP VL E LA LE K E+AGE FN++S +QL +L Sbjct: 511 MALLPILARMERLGILVDPAVLDELEREFGRELARLESKIAELAGESFNINSPRQLGEVL 570 Query: 591 FEKQGIKPLKKTPGGAP-STSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMIN 649 +E+ + +KT G ST LE LA + LP ++ +R L+KLKSTY DKL +I+ Sbjct: 571 YERLKLPHGRKTKGKTGYSTDYRELERLAAYHDLPAAVISHRNLSKLKSTYVDKLATLID 630 Query: 650 PKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQI 709 P GRVHT+++Q VTATGRLSS++PNLQNIP+R EGRR+R AF+A ++ ++ADYSQI Sbjct: 631 PADGRVHTTFNQTVTATGRLSSSNPNLQNIPIRTPEGRRLRAAFVAAAGHLFLAADYSQI 690 Query: 710 ELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMS 769 +LR++AH S D L AFA +DIH TAAE+F + V+++ RR AK INFG++YGMS Sbjct: 691 DLRVLAHYSGDPVLQEAFAHDQDIHARTAAEIFRVNQGLVSADMRRVAKTINFGIVYGMS 750 Query: 770 AFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIK 829 AFGLA QL RKEAQ ++D YFE Y GVL +M+ QA+ G+V TL RR LP+I Sbjct: 751 AFGLAEQLRCSRKEAQTFIDRYFELYQGVLRFMQEIVEQARRDGWVGTLLNRRRPLPEIN 810 Query: 830 SSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVH 889 S N RR AER AIN P+QGTAADIIK A IA D L+ R ++Q+HDEL+FEV Sbjct: 811 SGNKMRREFAERTAINTPIQGTAADIIKLAAIACDRALREAGCRSEALLQIHDELIFEVP 870 Query: 890 KDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 +D++ V I Q ME L VPL V + SG N + Sbjct: 871 QDELAQVGPLIRQAMEEVMELAVPLTVNLKSGPNLSE 907 >UniRef50_B0VJ17 DNA polymerase I n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VJ17_9BACT Length = 918 Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust. Identities = 393/947 (41%), Positives = 571/947 (60%), Gaps = 60/947 (6%) Query: 9 LILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L L+DG++ LYRA+ AF PL NS G T A++GV+N ++ + + A+ FD K Sbjct: 5 LYLIDGTALLYRAHFAFIKNPLINSKGIHTSAIFGVINSFLHILENTQAAYVAISFDRKA 64 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 TFR L+E YK+ RPPMPD+L AQIEP+ + +GL + + G EADD++GTLA+ + Sbjct: 65 PTFRHNLYEAYKAQRPPMPDELTAQIEPVKRFFELIGLKEIGLDGYEADDILGTLAKLYK 124 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDS 186 + V + T DKD QLV +++ M + +L + V KYGV PE ID+LAL+GD Sbjct: 125 DQFQIVFL-TSDKDYCQLVDERSVMLDPMKDIVLDRDAVYAKYGVYPEQFIDYLALVGDP 183 Query: 187 SDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLS 246 SDNIPGV +G KTA LL LD +YA +K+ + L +NKE AYLS Sbjct: 184 SDNIPGVSSIGPKTAAMLLSEYQTLDNIYANLDKLK-------PRLQEVLRENKENAYLS 236 Query: 247 YQLATIKTDV--------ELELTCEQLEVQQPAAEE--LLGLFKKYEFKR-WTADVEAGK 295 QLA I TDV L + L P EE + + +K E K T + Sbjct: 237 KQLAKIDTDVPIPKPDLEHLTFWAKDLRKAIPLLEEYEINSIKRKIELKYPETNTTKQQT 296 Query: 296 WLQAKGAKPAAKPQE-TSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAF 354 Q K KPQE T+ +E +A +++ N+VT+L E L++A + Sbjct: 297 EYQDDIFKEKEKPQEETAETEEKMPFSAVLVNTLNFVTLLKE---------LKEAKQISL 347 Query: 355 DTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERAL-ELLKPLLEDEK 413 DTETDS + + ANLVG+SF ++ A Y+P+ H Q++ L E+L+ L E Sbjct: 348 DTETDSPEPMRANLVGISFCMDEKKAYYLPLGH-------QLAVNLPLPEVLRHL---ED 397 Query: 414 ALK----VGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHK 469 ALK +G NLK+D +LA G+EL FDTML +YIL+ + +++ A L +K Sbjct: 398 ALKGKLLLGHNLKFDLIVLARNGLELDNPLFDTMLAAYILDPGTLNYSLETCALNELNYK 457 Query: 470 TITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQK---HKGPLNVF 526 I ++ GKGKNQ TF+ + E+A Y+AEDA K++P ++ N+F Sbjct: 458 MIPISDLIGKGKNQSTFDLVEPEKACIYSAEDAWAVY----KLYPVYRRKVDFSVMANLF 513 Query: 527 ENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQL 586 + IE+PL+ VL ++E NGV ID VL S ++ L L L K + AG EFN++ST+QL Sbjct: 514 DTIELPLIKVLQQMEMNGVAIDCSVLSEISHQINLELKTLTDKIYAFAGYEFNINSTQQL 573 Query: 587 QTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPL 646 +LFE++ + +KT G ST VLEELA+DY + +I++YR L+KL+STY LP Sbjct: 574 AKLLFEEKKLPYGRKTKTGY-STDNSVLEELAIDYEIAGIIIQYRQLSKLQSTYVSALPK 632 Query: 647 MINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE-DYVIVSAD 705 MINP+TGR+H+S++Q VT+TGRLSS++PNLQNIPVR E GR IR+AF A + +++I+ AD Sbjct: 633 MINPQTGRIHSSFNQTVTSTGRLSSSNPNLQNIPVRTEIGREIRKAFCAKDAEHLILDAD 692 Query: 706 YSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLI 765 YSQIELR++A +S D+ L+ AF + DIH+ AA++F + +E VT +QRR+AK INFG++ Sbjct: 693 YSQIELRLLALMSEDEVLIEAFKQDLDIHKRMAAKIFNVDIEKVTPDQRRAAKTINFGIL 752 Query: 766 YGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYL 825 YGM L+R+L I EA+ +D Y+ ++P + ++ + +A++Q Y ETL GRRLYL Sbjct: 753 YGMGQRKLSRELGISLNEAKDIIDGYYAQFPSIRNFINQCVNKARQQHYAETLFGRRLYL 812 Query: 826 PDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELV 885 P+I S N ++ AER A+N P+QGTAAD+IK AM+ + + + ++MI+QVHDEL+ Sbjct: 813 PNIDSKNQGLKSEAERIAVNMPIQGTAADLIKIAMLNIHKQIDKRED-IKMILQVHDELL 871 Query: 886 FEVHKDDVDAVAKQIHQLMENCT----RLDVPLLVEVGSGENWDQAH 928 FEV ++ ++ + ME+ V L +VG G+NW +AH Sbjct: 872 FEVQQEALEETKNIVKTCMESALPPKYAEKVHLKTDVGVGKNWFEAH 918 >UniRef50_Q1PUU8 Stongly similair to DNA polymerase I n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PUU8_9BACT Length = 887 Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/921 (39%), Positives = 548/921 (59%), Gaps = 46/921 (4%) Query: 9 LILVDGSSYLYRAYHAFPP-LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 ++DG S+ Y+A++A LT G P A+YG ML L+ + +P + A+VFD K Sbjct: 5 FFIIDGHSHCYQAFYAITAKLTTPDGTPANAVYGFTRMLLKLLREQRPDYLALVFDTKYT 64 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 T R + + YK+ R P+DL+ QI ++ +V+A G+P+ A G EADDVIG+L EK Sbjct: 65 TNRHQKYSDYKATRKETPEDLQVQIPLIYKVVRAFGIPVYAAKGYEADDVIGSLVTVLEK 124 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSS 187 V+I T DKD+ QL+ P + +++ I+ + + + G+ P ++D LAL GD S Sbjct: 125 KEIEVVIVTSDKDLEQLIGPKVKILHAKKGEIIDSDVLFTQKGIMPNQVVDVLALAGDVS 184 Query: 188 DNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSY 247 DNIPGVPG+G KTA L++ G L+++ A I+G K L + A S Sbjct: 185 DNIPGVPGIGNKTALDLIKKWGSLESVLANVGHISG------KKRQENLRTFADQARFSR 238 Query: 248 QLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAK 307 +L + D+ L + E + +L LF+ + F +D+ Sbjct: 239 ELLDLYNDIPLTVDMESCRLSTGENIKLRKLFRSFGFNTLLSDM---------------- 282 Query: 308 PQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISAN 367 VA E T +Y I E ++ ++ K FA D ET D + A+ Sbjct: 283 -----VATANTEAT-------HYYLINTIEQFHGFLEQISKKDAFAIDLETTGTDPLKAH 330 Query: 368 LVGLSFAIEPGVAAYIPVAHDYLDAPD---QISRERALELLKPLLEDEKALKVGQNLKYD 424 +VGLSF+ E A Y+P L AP+ ++ + L ++ +LEDE K+GQN+KYD Sbjct: 331 IVGLSFSWEQKEAYYVP-----LMAPENTRHLTADIVLPEIRKVLEDESKKKIGQNIKYD 385 Query: 425 RGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQL 484 +L + I L+GI FD+M+ SY+LN H++D +A +L +KTI E+ G GK Q+ Sbjct: 386 LLVLKKHNIGLKGIYFDSMIASYLLNPAKRNHNLDDIAFEYLSYKTIMIAELIGSGKQQI 445 Query: 485 TFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNG 544 T +++ +++ +YA +DAD+T +L M P L+K +G +F+ IE+PL+ VL+ +E NG Sbjct: 446 TMDKVPVDKVCQYACQDADITFRLAETMAPLLKK-EGLWQLFQEIEIPLIYVLAEMEGNG 504 Query: 545 VKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPG 604 + I+ L S +L +L LEK+ + +A +EFN+SS KQL ILF+K + L++T Sbjct: 505 ICINADFLRQMSGDLAAQLQCLEKEIYRVAEQEFNISSHKQLGAILFDKFQLPKLRRTKT 564 Query: 605 GAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVT 664 G ST VL LA +PLPK+ LEYR LAKLKSTY D LP ++N TG++HT+++Q VT Sbjct: 565 GV-STDANVLASLAWRHPLPKLALEYRQLAKLKSTYADALPNLLNQDTGKIHTTFNQTVT 623 Query: 665 ATGRLSSTDPNLQNIPVRNEEGRRIRQAFI-APEDYVIVSADYSQIELRIMAHLSRDKGL 723 +TGRLSS++PNLQNIPV+ + G++IR+AFI + ++ V +SADYSQIELRI+AH S D L Sbjct: 624 STGRLSSSNPNLQNIPVKTDIGKQIRRAFIPSGKNAVFLSADYSQIELRILAHFSEDTAL 683 Query: 724 LTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKE 783 + AF E DIH A A+ ++ +PLE VT+E RR+AKAINFG+IYG++ +GL+R + + Sbjct: 684 MEAFREDLDIHAAVASSIYHVPLENVTTEMRRNAKAINFGIIYGLNEYGLSRDTGLSLND 743 Query: 784 AQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAA 843 A+ ++D YF Y GV E+ ++ +AKE GYV+TL R+ +PDI + N R AER A Sbjct: 744 AKDFIDAYFTLYQGVREFRDKVVEEAKEMGYVKTLFNRKRAIPDINAKNKRFRNLAERIA 803 Query: 844 INAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQL 903 IN +QG+AAD+IK AM + + L+ RM++Q+HDEL+FEV ++ + + Sbjct: 804 INTIIQGSAADLIKVAMNNIYSKLKCGDYEARMLLQIHDELLFEVGVQALEQTRIMVQEE 863 Query: 904 MENCTRLDVPLLVEVGSGENW 924 M + L VP+ V + +G+NW Sbjct: 864 MGHAVTLRVPVKVNIKTGKNW 884 >UniRef50_UPI0001744922 DNA polymerase I n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744922 Length = 971 Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust. Identities = 410/985 (41%), Positives = 560/985 (56%), Gaps = 80/985 (8%) Query: 5 PQNPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 PQ L L+D + LYRA+ A P+ S G T A++G N L ++ KPTH F Sbjct: 6 PQR-LFLLDSMALLYRAHFALIRKPIFTSDGVNTSALFGYANALLDILQNQKPTHLGAAF 64 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 D T R +F YK+ R MP+DL I ++KAM +P+L V G EADD+IGTLA Sbjct: 65 DTSAPTPRHTMFPAYKAQREEMPEDLSVAIPAAKRLLKAMRIPVLEVDGWEADDIIGTLA 124 Query: 123 REAE-KAGRPVLISTGDKDMAQLVTPNITLI-----NTMTNTILGPEEVVNKYGVP-PEL 175 AE + G + T DKD QLVT N TLI ILG +EV ++GV P Sbjct: 125 HHAEARGGFETYMVTPDKDFGQLVTEN-TLIYKPGRQGADTEILGVKEVCERWGVSNPGQ 183 Query: 176 IIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAK 235 +ID L LMGD+SDNIPG+ GVGEKTA L+Q G ++ + ++I G + K Sbjct: 184 VIDLLGLMGDASDNIPGIAGVGEKTAAKLIQQFGSVEAMLDRVDEIEG-------KLKDK 236 Query: 236 LEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEF-----KRWTAD 290 ++ E+A +S QLATI D L + + L + E L + ++EF + + D Sbjct: 237 VKAGAEMARISKQLATIMVDAPLTVQLDDLALLGFDEEALKSILVEFEFNALGRRLFGDD 296 Query: 291 VEAGKWLQAKGAKP----------------------AAKPQETSVA---DEA-------- 317 +AG+ Q G A + VA DE Sbjct: 297 FKAGRGRQLGGGVAPVSAPAPPAKKSKGGDLQGDLFGAGAETIPVAAAGDEGSAEAMADA 356 Query: 318 ---PEVTATVISYD---NYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGL 371 P + D Y + + +AW+ KL F FDTETD LD +SA ++G+ Sbjct: 357 AAAPHLPGLKTIRDIPHRYELVKTADERRAWLEKLAGVDAFCFDTETDGLDPLSARMLGI 416 Query: 372 SFAIEPGVAAYIPVAHDYLDAPDQISRERA-LELLKPLLEDEKALKVGQNLKYDRGILAN 430 +F+I P Y + P++ A L+ +K L KA K+G NLK+D + Sbjct: 417 AFSIAPHEGCYFHI-------PEERDEHLAVLKEVKTFLSTSKAEKIGHNLKFDLRVFLA 469 Query: 431 YGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN---QLTFN 487 +GIE+ G FDTML + L RH MD L+ER+L + ++ + G+ K Q + Sbjct: 470 HGIEVAGPFFDTML-VHALVEPDQRHGMDYLSERYLGYSPVSITTLIGEKKGATPQKSMA 528 Query: 488 QIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKI 547 ++ LE YAAEDADVTLQL K+ P+L++ G + VF IE PL+PVL+ +E GVK+ Sbjct: 529 EVPLEPLAEYAAEDADVTLQLSQKLRPELER-LGLMKVFYEIEAPLLPVLAHMEHEGVKV 587 Query: 548 DPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGI--KPLKKTPGG 605 D L +EL + L ++ FNL+S KQL +LF+ + KP KKT G Sbjct: 588 DVPTLEEFGQELLSQANVLRERIQGYVDWPFNLNSPKQLGEVLFDHLKLMEKP-KKTATG 646 Query: 606 APSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTA 665 T+E+ L L +P+ IL YR KLKSTY D LP +NP T RVHT++HQ + A Sbjct: 647 QYQTNEQTLLTLQGRHPIIDDILAYRECTKLKSTYVDALPAAVNPLTHRVHTTFHQLMAA 706 Query: 666 TGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIELRIMAHLSRDKGLL 724 TGR++STDPNLQNIP+R ++GR IR+AF+ E +V++SADYSQIELR+MA LS D ++ Sbjct: 707 TGRMASTDPNLQNIPIRTDQGREIRKAFVPEKEGWVLMSADYSQIELRVMAELSADPAMM 766 Query: 725 TAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQL-NIPRKE 783 AF EG DIH+ATAA+V+G+ L+ V E RR+AK +NFG+IYG+SAFGL+++L N R E Sbjct: 767 EAFQEGHDIHQATAAKVYGVALDEVLPEMRRTAKMVNFGIIYGISAFGLSQRLGNTSRTE 826 Query: 784 AQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAA 843 A + ++ YF++YPGV YME QA+ QGYVETL GRR YL DI SSN R+A ER A Sbjct: 827 AAQIIENYFKQYPGVKRYMEDIVTQARTQGYVETLTGRRRYLRDINSSNMTVRSATERVA 886 Query: 844 INAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQL 903 +NAP+QGTAAD+IK AM+ V L+ + RM++QVHDEL+FEV ++VD V I Q Sbjct: 887 MNAPIQGTAADMIKLAMVNVARSLREGGFKTRMLLQVHDELLFEVPLEEVDKVKPVIEQG 946 Query: 904 MENCTRLDVPLLVEVGSGENWDQAH 928 M L VP+LVE G+G+ W +AH Sbjct: 947 MREALPLKVPVLVEAGTGKTWLEAH 971 >UniRef50_B6YQQ9 DNA polymerase I n=13 Tax=Bacteroidales RepID=B6YQQ9_AZOPC Length = 928 Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust. Identities = 382/954 (40%), Positives = 565/954 (59%), Gaps = 62/954 (6%) Query: 9 LILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L L+D + +YRAY++F PL NS G T A++G +N L +++ + PTH V FD Sbjct: 3 LFLLDAYALIYRAYYSFIKMPLINSKGFNTSAIFGFVNTLDNILRRENPTHIGVAFDPIE 62 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 TFR ++F+ YK+ R P+ +R I + +V A +P+L VSG EADDVIGT+A++ Sbjct: 63 PTFRHQVFKQYKAQREETPETIRLSIPIIKDIVSAYHIPILEVSGYEADDVIGTVAKKTS 122 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYG-VPPELIIDFLA 181 + + + T DKD QLV +I + ILG +E+ KYG + P +IDFL Sbjct: 123 R-DYEIFMMTPDKDYGQLVDEHIFIYKPRYRKDGFEILGVKEIKEKYGFISPIQMIDFLG 181 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGDSSDNIPG PG+GE TA+ L+ G ++ L + G+ + K+E+NKE Sbjct: 182 LMGDSSDNIPGCPGIGEITAKKLIARFGSIENLLKNVHFLNGI-------LKTKIERNKE 234 Query: 242 VAYLSYQLATIKTDVELELTCEQL---EVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 S LATIKTDV + +L ++ +P +++ F+K EF + + ++ Sbjct: 235 TILFSKFLATIKTDVPINFNPNELIREDIDKPVLKKI---FEKLEFHQLVS-----RFFG 286 Query: 299 AKGAKPAAKPQETS-------VADEAPEVTATVIS-YDNYVTIL-------DEETLKAWI 343 K + + K Q +S ++ E T TV+S +DN T+L + + I Sbjct: 287 EKRSVLSIKKQFSSSLLFTDKFVEKNNEKTETVLSNFDNLSTVLHKYRVIDKQSDIGDLI 346 Query: 344 AKLEKAPVFAFD---TETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRER 400 K++ F+F+ TE +D +SA LVG++F ++ G A ++P R+R Sbjct: 347 NKIKIQNFFSFNIKTTEAIEIDPLSAELVGIAFTLQEGEAYFLPF----------FGRKR 396 Query: 401 ----ALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRH 456 ++L K + E + LKVGQNLKYD +L YGI + FD ++ Y++N H Sbjct: 397 DIIPTVQLFKEIFESDTILKVGQNLKYDINVLKKYGIRMNYPIFDILIAHYLINP-EYLH 455 Query: 457 DMDSLAERWLKHKTITFEEIAG-KGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPD 515 ++D LA+ +L ++ I EE+ G K ++QL+ Q+ L YA E+AD+ L+L P Sbjct: 456 NLDFLAKTYLNYRIINTEELIGSKKESQLSVRQVPLSLLADYACENADIVLKLKNIFEPI 515 Query: 516 LQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAG 575 ++K N+F IE+PLV VLS +E GVK+D L ++S L L +EK +I+G Sbjct: 516 IRKSNFS-NLFYRIELPLVFVLSDMEEFGVKLDISALKDYSVVLNRYLESIEKIIFQISG 574 Query: 576 EEFNLSSTKQLQTILFEK-QGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLA 634 + FN++S K + ILF+ + I+ KKT G +TSE +LE L +P+ IL+YR Sbjct: 575 KIFNVNSPKMVGEILFDHLKIIENSKKTKSGQYATSEGILENLKKKHPIVGEILKYRKSK 634 Query: 635 KLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFI 694 KL +TY D LP +++ ++HT+Y+QA TATGRLSS PNLQNIP+R++EG+ IR+ FI Sbjct: 635 KLLTTYIDTLPTLVSFIDKKIHTTYNQATTATGRLSSNSPNLQNIPIRDKEGKEIRRVFI 694 Query: 695 APEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQR 754 ++ + +SADYSQIELRIMAHLS DK +L AF G+DIH A A+ +FG+PL +T + R Sbjct: 695 PDDNCLFLSADYSQIELRIMAHLSEDKNMLEAFRNGQDIHSAIASIIFGVPLAEITCDMR 754 Query: 755 RSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGY 814 R AK NFG+IYG+S FGLA QL + R A++ ++ YF +P + Y++R+ A A++ GY Sbjct: 755 RKAKITNFGIIYGISVFGLAEQLQVSRFIAKELINKYFMIFPDIKNYIDRSIAIARKDGY 814 Query: 815 VETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRV 874 VET+ R+ +LPDI S N R AER +INAP+QG+AADIIK AM + L + Sbjct: 815 VETIFRRKRFLPDINSRNSVVRKYAERNSINAPIQGSAADIIKVAMNRIHRRLIDNDLQS 874 Query: 875 RMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 +MI+QVHDEL F V D++D V + + ME+ T L VPL+V G G+NW +AH Sbjct: 875 KMIIQVHDELNFNVFIDELDKVKQIVVYEMEHATHLKVPLVVNCGIGKNWLEAH 928 >UniRef50_B4S5F3 DNA polymerase I n=12 Tax=Chlorobiaceae RepID=B4S5F3_PROA2 Length = 950 Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust. Identities = 387/940 (41%), Positives = 555/940 (59%), Gaps = 46/940 (4%) Query: 9 LILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L L+DG + +YRA+ A + G PTGA +G L L + Y P + AV FD++ Sbjct: 37 LFLLDGMALVYRAFFALQRADMKTRDGVPTGAAFGFLTTLLKIYETYAPDYLAVAFDSRE 96 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 KTFR E ++ YK++RP P+DL Q++ + +++A +P+L G EADD+IGT ARE E Sbjct: 97 KTFRHERYDAYKANRPQPPEDLITQLDFIFRLIEAFNIPILKQPGYEADDLIGTAAREFE 156 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLIN--TMTNTIL--GPEEVVNKYGVPPELIIDFLAL 182 R + I + DKDM QL+ +TL+ N +L G E+ + G+ P+ ID L L Sbjct: 157 PECR-INIVSPDKDMTQLIHDGVTLLKPGKRQNELLRFGAAELKEELGIAPDQFIDLLTL 215 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 GDSSDNIPG G+G KTA LL G LD + EK L R K++ L + + Sbjct: 216 TGDSSDNIPGAKGIGPKTASKLLLSYGSLDEISKNLEK---LPPRTRKSLEEFLPERE-- 270 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 L L TIKTD++L+ L+ QP E+L L ++ E + + + Sbjct: 271 --LIRDLVTIKTDIDLQTPLASLQCGQPDPEKLFPLLERLELRAIASKI--------PDL 320 Query: 303 KPAAKPQETSVADEAPEV--------TATVISYDNYVTILDEETLKAWIAKLEKA-PVFA 353 PA P + D AP+V T T D T++D E + + FA Sbjct: 321 FPAITPPKEIAPDNAPKVKREAHRAPTITEPPEDAVYTLIDTEEELTTLTETLAGLSSFA 380 Query: 354 FDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEK 413 DTET SL+ A LVG+S +++P A +I + P+ + E+AL +LKP+LE+ Sbjct: 381 LDTETTSLNTFEAELVGISISVKPQEAVFIYCS------PEGLKPEKALSILKPVLENPA 434 Query: 414 ALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITF 473 K GQNLKYD +L NYGI+L FDTML SY++N H++D LA+R L+++T T+ Sbjct: 435 IEKWGQNLKYDILVLKNYGIQLAPTGFDTMLASYVINP-EETHNLDDLAQRHLQYRTTTY 493 Query: 474 EEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPL 533 E+ G GK + Q+ LE YA +DAD+ L+L + L+ ++ + NIE PL Sbjct: 494 SELCGTGKKAVPLRQVPLEALKNYACQDADIALRLQNTLEKQLKDNQELEWLCRNIEFPL 553 Query: 534 VPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEK 593 V VL +E G+ +D K L + ++ A+L+++ + AG FN+ S KQL ILF + Sbjct: 554 VNVLVAMEYRGISLDTKHLEKTATKVASLTADLKERIYATAGSTFNIDSPKQLGEILFTR 613 Query: 594 QGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTG 653 G+ P KKT ST+ +VLEELA+ +P+ + ILEYR L KL+STY + LP ++NP TG Sbjct: 614 LGL-PAKKTTKTGYSTNVQVLEELAMIHPIAQDILEYRSLQKLRSTYIEALPKILNPATG 672 Query: 654 RVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY-VIVSADYSQIELR 712 ++HTS++Q +TATGRLSS++PNLQNIP+R E G+ IR+AFIA + ++SADYSQIELR Sbjct: 673 KLHTSFNQHITATGRLSSSNPNLQNIPIRTELGKEIRKAFIASTNRNFLLSADYSQIELR 732 Query: 713 IMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFG 772 I A LS DK L+ AF +DIH ATA +F E VTS+ RR AK +NFG++YG+ +G Sbjct: 733 IAAELSGDKKLIEAFRNQEDIHAATAKAIFDT--EDVTSDMRRKAKEVNFGVLYGIQPYG 790 Query: 773 LARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSN 832 L+ +LNI +KEA+ +D Y +YPG+ E ++ QA E G+V TL GRR Y+ + S N Sbjct: 791 LSMRLNISQKEAKAIIDTYKSKYPGLFEALDALVRQAAENGFVTTLLGRRRYIAALNSRN 850 Query: 833 GARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDD 892 G R AAERAA+N P+QGTAADIIK AM ++ +Q + M++QVHDELVFE ++++ Sbjct: 851 GNIRKAAERAAMNTPVQGTAADIIKYAMCLIENTMQEHKMHSTMLLQVHDELVFETNEEE 910 Query: 893 VDAVAKQIHQLMEN----CTRLDVPLLVEVGSGENWDQAH 928 + + + M+ C VP+ V+ G G+NW AH Sbjct: 911 HEKLETMVVASMKEAALVCGLKQVPVEVDTGIGKNWLDAH 950 >UniRef50_C3J9S9 DNA polymerase type I n=2 Tax=Bacteria RepID=C3J9S9_9PORP Length = 937 Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/949 (40%), Positives = 566/949 (59%), Gaps = 50/949 (5%) Query: 9 LILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L L+D S +YRAY AF P +S G T A+ G N L +I + KP + AV+FD +G Sbjct: 10 LFLLDASMLIYRAYFAFIHTPRFDSKGNNTSALLGFANSLIEIIKKEKPDYLAVIFDPEG 69 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 +FR + YK+ R P+ + + +++A+ +P + V EADDV+GTL++ AE Sbjct: 70 GSFRHREYTAYKAQRDATPEGILWAFPQVKRLLEALRIPAIEVPDYEADDVVGTLSQRAE 129 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTN--TILGPEEVVNKYG-VPPELIIDFLALM 183 K G V + T DKD QLVT + + T + G EV K+G V ++D+LAL+ Sbjct: 130 KEGFEVYMVTADKDYGQLVTEHALMYRPGTKGAEVWGEAEVCEKFGLVHCSQMVDYLALV 189 Query: 184 GDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVA 243 GD+SDNIPG G+G K A LL G +D +Y ++++ ++ KLE+ +E Sbjct: 190 GDASDNIPGCKGIGPKKASELLTQFGSIDAIYEHLDELS-------PSLKKKLEEGRENT 242 Query: 244 YLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADV-----EAGKW-- 296 LS LA I T+V +E+ E +P +L L ++E + EA W Sbjct: 243 LLSRYLAKICTEVPMEVEWETFRHLEPNVPQLRALLAEFEMHTLAKRLLPNEGEAADWGG 302 Query: 297 -LQAKGAKPAAKPQETSVADE--APEVTATV--------ISYDNYVTILDEETLKAWIAK 345 L + + + +E S A+ +PE TA++ ++ +V EE + W A+ Sbjct: 303 GLFSSSSTSQDEGKEPSEANSLFSPERTASLQGLTTLKDTAHTYHVVRTKEEQKQLW-AR 361 Query: 346 LEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELL 405 L ++ FAFDTETD L+ ++A++V SFA E G A Y+P+ D+ + A +L Sbjct: 362 LAESKQFAFDTETDGLNPLTASIVVASFAPEEGEAYYLPLPQDF---------DEACAIL 412 Query: 406 KPL---LEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLA 462 +PL + + + LK+ QN K+D+ +LA YG+ FDT++ Y++ + RH++D+LA Sbjct: 413 QPLDALMRNSEILKMAQNAKFDQKLLARYGVSSATPLFDTLVAHYLI-APDQRHNLDTLA 471 Query: 463 ERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGP 522 E++L ++TI + +++ K KN +A E YAAEDADV +L+ + L++ + Sbjct: 472 EQYLGYRTIAYSDLSEK-KNFDLRRDVAEELLVDYAAEDADVVRRLYPLLREKLEQEQQE 530 Query: 523 LNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSS 582 +F +EMPLV VL R+ER GV++D + LH SE+LT L E E AG FN+SS Sbjct: 531 -KLFWEVEMPLVGVLERMEREGVQLDVQRLHEVSEKLTNDLRETEDAIFHWAGHSFNVSS 589 Query: 583 TKQLQTILFEKQGIKPL-KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYT 641 KQ+ +LFE+ G+ KKT STSEEVL + +P+ + IL+YRGL KL TYT Sbjct: 590 PKQVGVVLFEELGLHAKGKKTKTNTYSTSEEVLSKCVDQHPIVQKILDYRGLKKLIGTYT 649 Query: 642 DKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYV 700 + LP ++ P GR+ TSY+QAVT TGRLSS+DPNLQNIP+R+ G+ IR AF+ ++ Sbjct: 650 EALPELVYPD-GRLRTSYNQAVTVTGRLSSSDPNLQNIPIRSAMGQEIRSAFVPRSSEFT 708 Query: 701 IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAI 760 +SADYSQIELR+MAH S+D+ L+ AF EG+D+HR+TAA ++ + E VT QR AK Sbjct: 709 FLSADYSQIELRLMAHFSQDEHLIKAFVEGEDVHRSTAARIYNVAPEEVTPLQRSHAKTA 768 Query: 761 NFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDG 820 NFG+IYG+SA+GL+++LNI EA + YFE YP V YM+ +A++ GY ETL G Sbjct: 769 NFGIIYGISAYGLSQRLNIDPSEASSLISSYFENYPAVRAYMDECVQKARKLGYTETLLG 828 Query: 821 RRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQV 880 RR YLPDI S + R AER A+NAP+QGTAAD+IK AMI +DA ++ + RMIMQV Sbjct: 829 RRRYLPDINSRSATVRQFAERNAVNAPIQGTAADLIKVAMIRIDAKMRERNMKSRMIMQV 888 Query: 881 HDELVFEVHKDDVDAVAKQIHQLM-ENCTRLDVPLLVEVGSGENWDQAH 928 HDEL F+ + +VD + +HQ M + L VPL VE+G G +W +AH Sbjct: 889 HDELNFDAYLPEVDELRALVHQEMCQAIPNLRVPLEVEIGVGSSWLEAH 937 >UniRef50_A6CAX6 DNA polymerase I n=2 Tax=Planctomycetaceae RepID=A6CAX6_9PLAN Length = 900 Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/924 (39%), Positives = 545/924 (58%), Gaps = 47/924 (5%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 L ++D S +++ +HA P +T G+PT A++G+ + ++I + P + D+ G Sbjct: 5 LYIIDTFSLVFQVFHAVPAMTGPTGQPTNAIFGITRDILNIIKTHSPDYLIFAMDSSGPG 64 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 R++L+ YK++R MP+DL QI + +VK +P++ G EADDV T+AR A + Sbjct: 65 TRNDLYSEYKANRSAMPEDLVPQIPHIMDVVKGFQVPVIECPGWEADDVFATIARLANEK 124 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSD 188 G I T DKD QL+ +I L N N + E V +GV P+ +IDF +L+GDS D Sbjct: 125 GIETTIVTNDKDARQLINDSIRLYNIRKNQFMDAEAVQADWGVRPDQVIDFQSLVGDSVD 184 Query: 189 NIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN-KEVA---Y 244 NIPGVP VG K AQ L++ G L+ + A +K G KL+QN KE A Sbjct: 185 NIPGVPLVGPKKAQTLIEQFGTLEGVLANADKAKG----------PKLQQNLKEFADQAR 234 Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304 +S +L T+ ++L + E + P E L LF + F+R+ D++ +A +P Sbjct: 235 MSRELVTLNQSLDLNINWEASRLTHPDRERLHQLFVDFGFRRFAEDMKEVLSTEAP-PEP 293 Query: 305 AAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNI 364 + +ET D P +++ ++ +L E+ F D ET L Sbjct: 294 VERIRET--IDTKP-------AFETFLALLKEQD------------EFCVDLETTGLKPA 332 Query: 365 SANLVGLSFAIEPGVAAYIPVAHDYLDAPD---QISRERALELLKPLLEDEKALKVGQNL 421 A +VG + + E YIPV + P + + LE LKP+LED + L QN+ Sbjct: 333 EAEIVGWAISWEKHRGFYIPV-----EGPSGQLALDPQYVLEHLKPILEDPEILITNQNI 387 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 KYD +L G+ L+G++ D M+ SY++++ H +D L+ER+L H I E+ G GK Sbjct: 388 KYDMVVLMRVGVFLQGVSIDPMVASYLISAGERGHSLDKLSERYLNHTMIPISELIGSGK 447 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 Q ++ +++ YA EDA++ QL ++ D KH G ++ +E PL+ +L+ +E Sbjct: 448 QQKKMFEVDVDKVAEYAVEDAEIAWQLS-RILQDELKHAGLWELYWELERPLISILAEME 506 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 G+K+D L S+ L RL L + HEIAG EFN++S QL+T+LFE+ + KK Sbjct: 507 FTGIKVDTAELKQQSQLLEKRLTTLISEIHEIAGHEFNIASPLQLRTVLFEELNLPVFKK 566 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 T G PST + VLE+LA + LP I E+R L+KLKSTY D LP ++NP+TGR+H S++Q Sbjct: 567 TKTG-PSTDQSVLEKLAPLHALPARITEHRHLSKLKSTYLDALPGLVNPETGRIHASFNQ 625 Query: 662 AVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFI-APEDYVIVSADYSQIELRIMAHLSRD 720 V ATGRLSS+DPNLQNIPVR +EGR+IR+AFI E++ ++ ADYSQIELRI+AHLS+D Sbjct: 626 VVAATGRLSSSDPNLQNIPVRTQEGRQIRKAFIPQDENWRLLCADYSQIELRILAHLSQD 685 Query: 721 KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 L AF EG DIH A A+++F +P + V S+ RR+AKA+NFG+IYG S FGL+ + IP Sbjct: 686 VALSQAFREGADIHTAVASDIFRVPHDQVDSDMRRTAKAVNFGVIYGQSPFGLSEAIGIP 745 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 + EA +++ YF RY GV E++++ +Q +VET+ GR+ + ++ + E Sbjct: 746 QSEAAGFIEDYFVRYQGVREFLDQILEDCAKQKFVETICGRKREIQGVRGGVQKQLNMPE 805 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 R AIN +QG+AAD+IK+AM+ V ++ EQ RM+MQ+HDELVFEV +D + + Sbjct: 806 RTAINTVIQGSAADLIKQAMLNVSDRIKQEQHPGRMLMQIHDELVFEVPLTALDTLGLIV 865 Query: 901 HQLMENCTRLDVPLLVEVGSGENW 924 + ME+ L+VPL+V++ SG NW Sbjct: 866 REEMESAMDLEVPLIVDMSSGLNW 889 >UniRef50_Q2S226 DNA polymerase I n=4 Tax=Rhodothermaceae RepID=Q2S226_SALRD Length = 926 Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust. Identities = 372/940 (39%), Positives = 562/940 (59%), Gaps = 46/940 (4%) Query: 9 LILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD-AK 65 L L+D S YRA++ F PL NS G+ T A YG N L LI + HAAVVFD + Sbjct: 13 LYLIDAMSLAYRAHYIFISRPLINSKGQNTSAAYGFTNSLLKLIEDHDIEHAAVVFDEGE 72 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 TFR E+++ YK++R P P++L I + +V+ + +P+L V GVEADDVIG LA++A Sbjct: 73 EDTFRKEMYDDYKANRDPPPEELLENIPYIKEIVEGLDIPVLEVPGVEADDVIGALAKQA 132 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPELIIDFLA 181 E V+I + DKD QL++ +++ I + ++YG+ P +D LA Sbjct: 133 EADDADVVIVSPDKDFKQLLSDKVSIYKPAKGDQDFEIKTGDTFRDEYGLDPAQFVDMLA 192 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGDSSDN+PGV G+GEKTAQ LL+ ++ L + ++G K ++++ E Sbjct: 193 LMGDSSDNVPGVYGIGEKTAQKLLREYHSVENLIDHADDLSG------KRAREGMQEHAE 246 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 A LS +L I+T++++ L +L+ ++ E+L +F++ EF + + ++ Sbjct: 247 EARLSKRLVRIRTELDVGLDWHELQRRELDEEKLTAVFQELEFDSFGDRLGIEGGEGSEE 306 Query: 302 AK------------PAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKA 349 P K QE PE +Y + EE L A+ +L + Sbjct: 307 ETDEDDPDLQFDFGPYEKVQELD-----PEAV-------DYEVVRTEEELHAFADRLGEE 354 Query: 350 PVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLL 409 +AFD E S D ++A+LVGLSF+ E A Y+P PD + L++L P+L Sbjct: 355 ARYAFDAEATSRDPMTADLVGLSFSSEAERATYVPTP-----LPDDTPTDAVLDVLGPVL 409 Query: 410 EDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHK 469 + K+G NLKYD +L +G+E+ G FDTM+ Y++ + H++D +A L +K Sbjct: 410 ARDTE-KLGHNLKYDLLLLKQHGVEVGGTLFDTMVAHYLV-APEENHNLDDVARSVLNYK 467 Query: 470 TITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENI 529 + ++ G ++ + ++ +E A YA EDAD++ +L ++ L+ L+V +I Sbjct: 468 MVPIADLIGDETDRDSMREVEVETAAPYACEDADISYRLADELEAQLED-GNVLDVAHDI 526 Query: 530 EMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTI 589 E PLV VL+ +E G+++D VL L RL+ +E++ E+AGEEFN++ST+QL I Sbjct: 527 EFPLVHVLATMEHTGIRLDTDVLDEILAGLEERLSGIEEEVFELAGEEFNINSTQQLGEI 586 Query: 590 LFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMIN 649 LFEK + + KTP G PST E VL+EL+ ++ +P ++L++R KLKSTY D L +++ Sbjct: 587 LFEKLDLPVVSKTPTGKPSTKESVLQELSTEHEIPGLVLDWRSTYKLKSTYLDSLGELVH 646 Query: 650 PKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQI 709 P+TGR+HTS++Q TATGRLSS+DPNLQNIP+R E GR+IR+AF+ + + ++SADY+QI Sbjct: 647 PETGRLHTSFNQTRTATGRLSSSDPNLQNIPIRTEMGRQIRRAFVPKDGWALLSADYAQI 706 Query: 710 ELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMS 769 ELRI+A +S D + F EG DIH AA V+G+ E VT EQR AK +N+G+ YG+S Sbjct: 707 ELRILAAMSGDDAMRATFQEGGDIHTDAAARVYGIDPEDVTPEQRSKAKEVNYGIPYGIS 766 Query: 770 AFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIK 829 +GLA+++ +P EAQ + Y + YPGV + + +A+++GY ETL GRR YLPDI Sbjct: 767 PWGLAQRMRMPVDEAQDIIKQYRKSYPGVSQLLNELVEKAQDKGYAETLLGRRRYLPDID 826 Query: 830 SSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVH 889 SSN R+AAER A+N P+QGT AD+IK AM + L + +M++QVHDELVFEV Sbjct: 827 SSNSNARSAAERVAVNMPIQGTQADMIKIAMNRIHDRLAGDDWATQMLLQVHDELVFEVP 886 Query: 890 KDDVDAVAKQIHQLMENCTRL-DVPLLVEVGSGENWDQAH 928 D++DA I M + L DVP+ V++ +G+NW +AH Sbjct: 887 PDELDAAQTMIDDEMRDALPLDDVPVTVDMDTGDNWLEAH 926 >UniRef50_C8PRX0 DNA polymerase I n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PRX0_9SPIO Length = 951 Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust. Identities = 392/968 (40%), Positives = 550/968 (56%), Gaps = 57/968 (5%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHA 58 M Q Q+ L L+D +YR+Y AF PLTN AGE A+YG L ++ Y+P + Sbjct: 1 MTQHTQDTLYLLDSYGLIYRSYFAFISHPLTNKAGENVSALYGFFRSLAMILKTYRPRYF 60 Query: 59 AVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVI 118 FD++ TFR E + YK+ R P+DL AQI + ++ A+G+ L G EADD+I Sbjct: 61 LAAFDSRTPTFRHEWYSEYKATRDKTPEDLHAQIPHIEKILTALGIACLRKDGFEADDII 120 Query: 119 GTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTIL---GPEEVVNKYGVPPEL 175 TLAR + + GR +I +GDKD+AQLV ++++ + L G EEV +GV P Sbjct: 121 ATLARRSAQEGRRCVIISGDKDLAQLVGDFVSVLKPDKSEALAQCGVEEVKAHWGVAPAQ 180 Query: 176 IIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAK 235 ++D+L+L+GDS+DNIPGV G+G KTA LLQ G LD +Y + IAG + K Sbjct: 181 MLDYLSLIGDSADNIPGVKGIGPKTAVKLLQDYGTLDAVYEHIDSIAG-------AVQKK 233 Query: 236 LEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRW-------- 287 L K+ AY S +L T+ +V +E T + E L K+YE R Sbjct: 234 LAAGKDSAYFSKKLITLADNVPIEGTLDDYRCTALHYAETAALLKEYELPRLGELYAKAA 293 Query: 288 -----------------TADVE---AGKWLQAKGAKPAAKPQETSVADEAPEVTATVISY 327 ADV AGK GA AA T A+ A A + Sbjct: 294 GESETAGSAAEQNTAAGKADVNTATAGK----TGATTAADDIGTKPANSAAAQPAELRKN 349 Query: 328 DN-YVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVA 386 D Y T+ D + L+A IA+ E AFD ET L+ + +LVG S +++ G Y+P+ Sbjct: 350 DGEYRTVTDAKELEAVIAEAEAQGFAAFDCETTGLNPLYDSLVGFSLSLKAGTGIYVPLK 409 Query: 387 HDYLDAPDQ----ISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIA--F 440 + +Q + A +LL L +++ V N K+D +L G+ R F Sbjct: 410 APAPELGEQPFAVMPLAAAKKLLARLWNNKELTLVLHNGKFDYQVLRTAGVFTRAGCRLF 469 Query: 441 DTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAE 500 DTM+ +++L +++L E L + + ++++ KG TF ++L +A YAAE Sbjct: 470 DTMIAAWLLEPDNLSFGLENLTEAQLGLQGLDYKDVVPKG---CTFAAVSLPQATAYAAE 526 Query: 501 DADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELT 560 DAD TLQL+ P L++ +FE +EMPL+P+L+ +E G+ + + L SEEL Sbjct: 527 DADFTLQLYHVYKPALEQ-ANLTTLFETLEMPLMPLLADMEAQGIFLKKEELAAFSEELA 585 Query: 561 LRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALD 620 LA E + +++ G FN++S KQLQ +LF ++ + KKT G ST VLEELA Sbjct: 586 GTLARDEAEIYKLVGHPFNIASPKQLQEVLFTERKLPTGKKTKTGY-STDISVLEELAAI 644 Query: 621 YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIP 680 LP IL+YR AKLKS Y D LPL+ + GR+HTS+ Q TATGRLSS DPNLQNIP Sbjct: 645 DELPAKILDYRASAKLKSGYADALPLLADAN-GRIHTSFIQTGTATGRLSSRDPNLQNIP 703 Query: 681 VRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAE 740 +R EEGR+IR+AF A + ++SADY+QIEL I+AH S+D+ L+ AF +G D+H ATAA Sbjct: 704 IRGEEGRKIRKAFYAADGCKLISADYAQIELVILAHFSQDENLVKAFRQGTDVHAATAAL 763 Query: 741 VFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLE 800 +F +P+E V + RR AK INFG++YGMSAF LA QL I R EA ++ YF Y GV Sbjct: 764 IFNVPVENVVPDMRRIAKVINFGVMYGMSAFRLANQLRISRTEAADFITRYFTTYSGVAA 823 Query: 801 YMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAM 860 +ME + A E+G+VETL GRR Y+ I S N +RAAAER AIN P+QG+AADI+K AM Sbjct: 824 FMETLKESAAEKGFVETLMGRRRYIRAINSRNQTQRAAAERIAINTPIQGSAADIVKTAM 883 Query: 861 IAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGS 920 + VD L+ + +++QVHDEL+ E +VD+V + Q ME+ +L VPL V + S Sbjct: 884 LHVDRALKRQHLSAHLLLQVHDELILEAPDSEVDSVKALLKQEMEHVVKLAVPLRVSIES 943 Query: 921 GENWDQAH 928 G W H Sbjct: 944 GSCWGDFH 951 >UniRef50_D1CFH6 DNA polymerase I n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFH6_THET1 Length = 930 Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust. Identities = 385/941 (40%), Positives = 559/941 (59%), Gaps = 61/941 (6%) Query: 9 LILVDGSSYLYRAYHAFPP-LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 ++L+D S +YRAYHA P L S GE T A+YG NML +I + P AV FD GK Sbjct: 9 VVLIDAYSLIYRAYHALPSDLATSKGEKTNAIYGFCNMLVQVINRENPDSIAVAFDV-GK 67 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 FR + F YK+ R PMPDDL+AQI + ++ A +P+ V G EADDVIG+LA++ Sbjct: 68 AFRHDEFVEYKAQRAPMPDDLQAQIGRVRQVIAAFDIPVYEVPGYEADDVIGSLAKKLSS 127 Query: 128 AGRPVLISTGDKDMAQLVTPNITLI-----NTMTNTILGPEEVVNKYGVPPELIIDFLAL 182 G V+I TGDKD QLV+ +++++ + P+ V +YG P I+DF AL Sbjct: 128 QGHQVVIVTGDKDFLQLVSDSVSVVLPARGRFSEVQVYTPDLVRLQYGFDPRYIVDFKAL 187 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGA-KTMAAKLEQNKE 241 MGD+SDNIPGVPGVGEKTA++L+Q G L + + I R A K ++L QN Sbjct: 188 MGDASDNIPGVPGVGEKTARSLIQTFGSLQNILENVDSIKPERIRNAIKEHQSQLIQN-- 245 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 +LATI TD+++++ P +++ +F++ EF+ + K+ + Sbjct: 246 -----LRLATIVTDIDVDIEPVISHAWAPDMQKVNEIFRELEFRSLMYRLP--KYFE--- 295 Query: 302 AKPAAKPQETS---VA----DEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAF 354 PQ TS VA +E P++ + Y + D+E+L+ + +L AF Sbjct: 296 ------PQNTSSEKVASVERNEQPQIQ------EKYEIVSDQESLRRLVRELLAKEYIAF 343 Query: 355 DTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKA 414 DTET + + ++LVG+SF+ + G+A Y+P+ D + L+ L PLLE Sbjct: 344 DTETSGKNVMESDLVGVSFSPKAGIAYYVPINGFSDDGTKDL-----LDELSPLLEGGPK 398 Query: 415 LKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVA-GRHDMDSLAERWLKHKTITF 473 K+ N K+D L +GI + + FDT + +++LN + G D LA L + T Sbjct: 399 -KIAHNAKFDYMALYKHGIRVSPLYFDTSIAAFLLNETSVGLKD---LAATRLGIQMTTI 454 Query: 474 EEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPL 533 + + GKGKNQ T +++++E RYA DAD+T +L + ++ + K ++F +EMPL Sbjct: 455 DSLIGKGKNQKTMLEVSVDECARYACADADMTFRLFTMLEKEIVERKLQ-DLFYTLEMPL 513 Query: 534 VPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEK 593 VPVL+ +E GV ID L + S +L ++ ++E + +EIAG EFNL S +QL LF+ Sbjct: 514 VPVLADMEMTGVAIDADALKSLSTKLYEQIRDIESQIYEIAGYEFNLKSPQQLSKFLFQD 573 Query: 594 QGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTG 653 G+K ++KT G ST LE L+ +P+ +IL YR L KLK TY D LPLM++ TG Sbjct: 574 LGLKGIRKTSKGY-STDAATLEALSGQHPVIDLILSYRQLTKLKDTYVDALPLMVSRSTG 632 Query: 654 RVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA----------PEDYVIVS 703 R+HT++ Q TGRL+S+DPNLQNIP+R+ G+ +R+AF+A E V++S Sbjct: 633 RLHTNFSQTSAVTGRLASSDPNLQNIPIRSSLGKEVRKAFVAGSPEKNNAIFDEPSVLLS 692 Query: 704 ADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFG 763 ADYSQIELR++AH++ + L AF+ DIH TA+ +FG+P+E+V RR K INFG Sbjct: 693 ADYSQIELRVLAHVTDEPKLKEAFSRDIDIHALTASRLFGVPIESVDDNMRRMGKTINFG 752 Query: 764 LIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRL 823 +IYGMS F LAR + ++EA ++ Y +++P V Y E+ +A+++GYVET GRR Sbjct: 753 IIYGMSGFRLARDTGLEQREANLFVKRYMDQFPRVKAYFEQLIKEAEKKGYVETPLGRRR 812 Query: 824 YLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDE 883 YLPDI SSN RR AA RAAIN P+QG AADIIK+AMI V + L+ E + +MI+QVHDE Sbjct: 813 YLPDITSSNPQRREAARRAAINMPIQGMAADIIKQAMIDVHSALEREGIKAKMILQVHDE 872 Query: 884 LVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 L+FEV + +D A+ I + M L VPL+VE G NW Sbjct: 873 LLFEVAESQLDRAAEVIVREMSTAFDLSVPLVVEAEYGPNW 913 >UniRef50_Q7UI29 DNA polymerase I n=1 Tax=Rhodopirellula baltica RepID=Q7UI29_RHOBA Length = 1027 Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/926 (38%), Positives = 537/926 (57%), Gaps = 41/926 (4%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 +++VD S +Y+ +HA PP+T++ G P A+YG + + L+ + P + FD T Sbjct: 130 VVVVDAHSLIYQVFHALPPMTSTGGLPVSAVYGFVGDMLELLSRKNPDYLIAAFDKSEVT 189 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR+EL+ YK++R MPD+LR QI + + AMG+ ++ SG EADD++ T+A + E+A Sbjct: 190 FRNELYPEYKANRDSMPDELRQQIPLIRQAIDAMGIGIIEQSGFEADDLLATVAAKVEEA 249 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSD 188 G L+ T DKD QL++ + N + + E+ +G+ P+ ++D+ AL+GD D Sbjct: 250 GGRCLVVTSDKDCRQLISDQTKIYNIRKDQEIDAAELFGLWGIRPDQVVDYQALVGDPVD 309 Query: 189 NIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQ 248 N+PG+ +G K AQ LL+ L+ + E I+G K L +E A +S + Sbjct: 310 NVPGISLIGPKIAQQLLETHDTLEEILNNAESISG------KKRKENLMNGREAAMMSRE 363 Query: 249 LATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAKP 308 L +K DVE + + E + L +++ F+R + A + L + KP Sbjct: 364 LVELKRDVESPIPWNRCVRSAADLERVDALLQEFGFRRLRS--RAAELLGGEAPVEEPKP 421 Query: 309 QETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANL 368 S Y TI +E LKA +L K V A DTET S +L Sbjct: 422 AWES----------------RYQTITNESELKALAVELAKQTVLAIDTETTSTHARGCDL 465 Query: 369 VGLSFAIEPGVAAYIPVAHDYLDAPD---QISRERALELLKPLLEDEKALKVGQNLKYDR 425 VG+S A +PG AAYIPV APD I+ +E+L+ +LE KVG NLK+D Sbjct: 466 VGISIAWQPGEAAYIPVR-----APDGDPAINELIVIEILRDVLESSAIEKVGHNLKFDV 520 Query: 426 GILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLT 485 +L + G++L GI DTM+ Y+LNS H +D LA+R L H ++ +++ G GK Q+T Sbjct: 521 IVLRSAGVQLGGITMDTMVADYLLNSGGRNHGLDDLAQRRLDHTNLSIKDLIGTGKKQIT 580 Query: 486 FNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGV 545 +Q+ +++ YA ED DV ++L + +L + G +F+ +EMPL VL+ +E NG+ Sbjct: 581 MDQVPVDDVSPYACEDVDVPIRLAPTLRDELNE-SGLDGLFDEVEMPLTEVLAEMEFNGI 639 Query: 546 KIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGG 605 ++ L SE +A+L AG EFNL S KQL +LFE+ G+ +KKT G Sbjct: 640 HVNADTLAKMSERFDKDIADLRALVFSAAGHEFNLDSPKQLGVVLFEELGLPVIKKTKTG 699 Query: 606 APSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTA 665 ST +VL +LA+++ + + +L+YR KLK+TY D LP +I KTGRVHTS+ Q V A Sbjct: 700 V-STDADVLSQLAVNHEIAEHVLQYRQATKLKNTYIDALPQLICDKTGRVHTSFRQDVAA 758 Query: 666 TGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQIELRIMAHLSRDKGLL 724 TGRLSS++PNLQNIP+R E+G+ IR AF A E + ++ ADYSQIELR++AH S D+ L+ Sbjct: 759 TGRLSSSEPNLQNIPIRTEQGKAIRAAFTAGREGWSLLGADYSQIELRVLAHYSGDEALI 818 Query: 725 TAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEA 784 A+ + DIH AAEV G+ VTS+ RR AK INFG++YG S FGLA+ L I EA Sbjct: 819 GAYHDDADIHTRVAAEVNGIEESEVTSDLRRIAKTINFGIVYGQSPFGLAKTLGISNDEA 878 Query: 785 QKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKS----SNGARRAAA- 839 + Y++LYF+RY GV +M T A+ + +GYV T+ GRR + ++ RR+ Sbjct: 879 RDYIELYFQRYSGVEAFMMDTLARCRNEGYVATMLGRRREIKGVRDLAKLPESKRRSLTE 938 Query: 840 -ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAK 898 ER AIN P+QGTAAD+IK AM+ V L+ + R+++Q+HDEL+ E +++DA++ Sbjct: 939 PERIAINMPIQGTAADLIKLAMLRVHEQLKQSDLQARLLLQIHDELLLESPDEELDALSD 998 Query: 899 QIHQLMENCTRLDVPLLVEVGSGENW 924 I + M + LDVPL V+V G W Sbjct: 999 TIREAMTSVMELDVPLKVDVAHGRTW 1024 >UniRef50_C5CIW2 DNA polymerase I n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CIW2_KOSOT Length = 896 Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/933 (40%), Positives = 543/933 (58%), Gaps = 56/933 (6%) Query: 7 NPLILVDGSSYLYRAYHAFP-PLTNSAGEPTGAMYGVLNMLRSLIMQY--KPTHAAVVFD 63 N L L DG++ +YRAY A LTNS GEPT A+YG ML I Y + +A FD Sbjct: 3 NRLFLFDGTAIVYRAYFAIDVSLTNSKGEPTNAVYGTARMLSRFIKNYIAEGDYALFAFD 62 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 K T R +LFE YK+ R MPD L AQ++ + +V+ G+ +V+ +EADD+I T Sbjct: 63 RKEATHRHDLFEGYKATRAEMPDALVAQLKYIPDLVEGFGIKFHSVATLEADDIIATAVT 122 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPE----EVVNKYGVPPELIIDF 179 + ++I +GDKD+ QLV + ++ ++ E +V K+G+PPE I + Sbjct: 123 KYRDKFDEIVIVSGDKDILQLVDEKVKVLRFVSGLTDLEEYDRRKVEEKFGLPPEKIYEL 182 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 L+L GD+SDNIPGVPG+G KTA LL+ G +D +Y K+ + + KL Sbjct: 183 LSLCGDTSDNIPGVPGIGIKTALKLLKEYGSIDEIYKNIRKL-------SPGLRKKLMDG 235 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVE----AGK 295 K+ +S +L + TD +L + E+L + E+L LF K EF + + Sbjct: 236 KKALEMSKKLVRLVTDADLHIELEELRYRGLDKEKLRELFLKLEFASLLREFDLTNLGSD 295 Query: 296 WLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDE--ETLKAWIAKLEKAPVFA 353 + G +P + QE LDE ETLK + V + Sbjct: 296 NNEDNGYRPVSSQQE-----------------------LDELFETLKG-------SDVIS 325 Query: 354 FDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEK 413 D ET SLD A +VG+S AI+ G YIPV H+ D Q ++ L LK LLED Sbjct: 326 IDLETSSLDPHEAKIVGISVAIKDGEGFYIPVNHESSDW--QADEKQVLLRLKELLEDSG 383 Query: 414 ALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITF 473 VGQNLK+D IL +GIE FDTM+ +Y+LN + R ++D LA ++L ++T +F Sbjct: 384 TKIVGQNLKFDYEILEKHGIEPVVPHFDTMIAAYLLNPDSRRFNLDDLALKFLGYRTTSF 443 Query: 474 EEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPL-NVFENIEMP 532 E+ K + + F ++++EEA +Y+ EDAD+ L+L+ + L ++ L N+F IEM Sbjct: 444 SELMNKNQLKDQFEKVSVEEAAKYSVEDADIALRLYRVLSKKL--YESDLDNIFHKIEME 501 Query: 533 LVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFE 592 L+PVL+ +E NGV ++ + L N SEE RL ++ ++ E+AGE FN +S Q+ ILFE Sbjct: 502 LIPVLAELELNGVYMNVESLKNLSEEYEKRLGKIREELFELAGEPFNPNSPTQVSKILFE 561 Query: 593 KQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKT 652 K G+ P KKT GA STS VLEEL ++P+ + +L+YR KLKSTY D LP ++NP T Sbjct: 562 KLGLNPPKKTKHGAYSTSAAVLEELVNEHPIIQKLLDYRKYQKLKSTYLDTLPTLVNPVT 621 Query: 653 GRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFI-APEDYVIVSADYSQIEL 711 GR+H SYHQ T TGRLSS++PN+QN+P++ EEG+ IR+ + D+ I+SADYSQIEL Sbjct: 622 GRIHASYHQTGTGTGRLSSSNPNMQNLPIKGEEGKEIRKCVVPQKSDWKIISADYSQIEL 681 Query: 712 RIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAF 771 R++AH S D+ L++AF G+D+H TA+ ++G+ ++ VT E R+ K +NF +IYG+S + Sbjct: 682 RVLAHFSEDERLISAFKNGEDVHALTASRLYGVSVKDVTPEMRQVGKMVNFSIIYGISPY 741 Query: 772 GLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSS 831 GLAR+L I A+ + YF YPGV +++ +AKE+GYV TL GR+ +P ++ Sbjct: 742 GLARRLKIKTHIAENMISNYFNAYPGVRKFINEVIHEAKEKGYVRTLFGRKREIPHFRTR 801 Query: 832 NGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKD 891 N + ER AIN P+QGTAADI+K AMI + ++ E I+QVHDELVFE Sbjct: 802 NKMKIQEGERIAINTPIQGTAADIMKLAMIKIHKMVKEEGLEAFPILQVHDELVFEAPAT 861 Query: 892 DVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 +VD V + + M L VPL V+V W Sbjct: 862 EVDRVCDILTRGMSGVVELKVPLEVDVAVNSYW 894 >UniRef50_A6TSU6 DNA polymerase I n=13 Tax=Clostridiaceae RepID=A6TSU6_ALKMQ Length = 897 Score = 637 bits (1644), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/923 (38%), Positives = 553/923 (59%), Gaps = 42/923 (4%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 ++++DG+S + RA++A PPLTN G+ T A+YG + ML ++ Y P + +V FD K T Sbjct: 6 MVIIDGNSLINRAFYALPPLTNKEGQHTNAIYGFMTMLLKVMDDYDPQYISVAFDRKAPT 65 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR + FE YK+ R MP +L Q+EPL ++ A + + + G EADD+IGTL++ AE+ Sbjct: 66 FRHKSFEGYKAGRKKMPPELAEQLEPLKEVLDAFHIYRVEIDGFEADDLIGTLSKYAEEQ 125 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPELIIDFLALMG 184 LI TGDKD QL + + ++ T I P++++ +Y V PE ID LMG Sbjct: 126 DIECLIVTGDKDALQLASEKVKILFTKKGISSLEIYDPQKIMEQYEVTPEQFIDLKGLMG 185 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 D+SDNIPG+PGVGEKTA LL+ G ++ L +I+ A+ + K+E N E A Sbjct: 186 DNSDNIPGIPGVGEKTAIKLLKQFGTVENLIQNAGEIS------AQKLREKVENNTEQAM 239 Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304 +S +LATI T+V +E+ E+L+ E++L LFKK+EF V A K + Sbjct: 240 MSKRLATIMTNVPVEIELEKLKKIAIDEEKVLALFKKFEFNTLIGRVIARK----EEVDG 295 Query: 305 AAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNI 364 ++ + +E ++T +DE LK ++ T+T+ + + Sbjct: 296 EVVVKQEKMTNEIAQITN-----------IDE--LKKAFDEVRAGKQMILQTKTEEENIV 342 Query: 365 SANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYD 424 +++ ++F++ G Y Y+D D +E L +K +LEDE+ K+G ++K++ Sbjct: 343 LDHILAITFSVN-GEKLY------YIDVRDFSDKEALLIQIKEVLEDEEIHKIGHDIKHE 395 Query: 425 RGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQL 484 + IE++ + FDTM+ Y+++ + + LA +++ + ++ EE+ GKGKN + Sbjct: 396 IRHFYVHDIEMKNVTFDTMIGEYLIDPAKSSYALKDLAAQYIGQEVMSEEELRGKGKNLI 455 Query: 485 TFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPL---NVFENIEMPLVPVLSRIE 541 + + E+ +Y + V K++P+++ L ++ +E+PLV VL+ +E Sbjct: 456 SIGEAPKEDLMKYLCQRVSVIG----KIYPEIKAKMQELELEKLYYEVELPLVEVLAAME 511 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 G+K+D +L E ++ L K HE+A FN++S KQL +LFEK + P+KK Sbjct: 512 YKGIKVDRSMLEILEIEFGEQIDLLTKAIHELAETNFNINSPKQLGEVLFEKLELPPIKK 571 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 T G ST+ EVLE+L + + ILEYR + KLKSTY D L +INP+TGR+H++++Q Sbjct: 572 TKTGY-STNAEVLEKLQDQHDIIPKILEYRQVTKLKSTYVDGLLNIINPETGRIHSNFNQ 630 Query: 662 AVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDK 721 VT TGR+SST+PNLQNIP++ E GRR+R+ F+A E++ + ADYSQ+ELR++AH+ D+ Sbjct: 631 TVTTTGRISSTEPNLQNIPIKLEMGRRLRKVFVANENHQFIDADYSQVELRVLAHICEDE 690 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 LL AF + +DIH TAAE+F +P+E VT R SAKA+NFG++YG+S +GL++ LNI R Sbjct: 691 NLLDAFLKNQDIHTRTAAEIFDVPMEEVTDSMRSSAKAVNFGIVYGISDYGLSQNLNITR 750 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 +A+KY+D Y ++YP V YM+ QA +QGYV TL RR YLP++KS N R+ ER Sbjct: 751 VKAKKYIDNYLDKYPSVKRYMDEIVEQAHQQGYVVTLFNRRRYLPELKSRNFNIRSFGER 810 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 A+N P+QG+AADIIK AM+ V L+ + ++I+QVHDEL+ E ++V+ K + Sbjct: 811 MAMNTPIQGSAADIIKIAMVNVYRRLKEQGLTSKLILQVHDELIVEAPDNEVEVAIKIVR 870 Query: 902 QLMENCTRLDVPLLVEVGSGENW 924 + ME L V L V++ NW Sbjct: 871 ESMEEAMNLKVQLKVDLAYANNW 893 >UniRef50_B2UNN5 DNA polymerase I n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UNN5_AKKM8 Length = 945 Score = 636 bits (1641), Expect = e-180, Method: Compositional matrix adjust. Identities = 389/969 (40%), Positives = 570/969 (58%), Gaps = 65/969 (6%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHA 58 M P L ++DG + YRA+ AF P+ NS G T A+YG N L ++ +PTH Sbjct: 1 MTDSPSKRLFILDGMALAYRAHFAFFSNPIRNSKGVNTSAVYGFANTLLGILEHERPTHI 60 Query: 59 AVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVI 118 A FD T R +L+ YK++R MP++L Q+ + +++AM +P+L G EADD I Sbjct: 61 AACFDTSAPTARHKLYPAYKANRESMPEELSDQMPLIFRLLEAMNIPILRYEGYEADDTI 120 Query: 119 GTLAREAEKA-GRPVLISTGDKDMAQLVTPNITLINT----MTNTILGPEEVVNKYGVP- 172 GTLAR A+ G + + DKD+ QL++ L + ++ ++ ++G+ Sbjct: 121 GTLARIADGTEGFQTYMVSQDKDLGQLISSTCFLWKPGKRGNDHEVIDLAKLKEQWGIER 180 Query: 173 PELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTM 232 + ++D LALMGDSSDNIPG+PGVGEKTA+ L+ G ++ L + +K+ G Sbjct: 181 ADQVVDILALMGDSSDNIPGLPGVGEKTAKLLIGEFGSVENLLSNTDKLKG-------KR 233 Query: 233 AAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVE 292 +E+N +A LS QLATI +V L +T +L ++P+ EEL L ++ EF+ A + Sbjct: 234 KQIVEENGAMATLSKQLATIDRNVPLTVTLPELVKREPSPEELQALLQELEFRSMQAKLF 293 Query: 293 AGKWLQAKGA--------KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLK---- 340 K + + A PA + ++ A+ + V+ + + + +E LK Sbjct: 294 GKKAPEPRKAPLPADDLFAPAPRTEQPLSAEPSAPVSGARQNGSGQMDLFEERHLKTVDD 353 Query: 341 ---------------AWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPV 385 + A+LEK + FDTET L+ + NL+G+SF EP A Y+PV Sbjct: 354 FRHEYIIADTPEARSSMAAELEKYDSWCFDTETTGLNPLMDNLLGVSFCAEPHKAWYMPV 413 Query: 386 AHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLE 445 S LE ++PLLE A K+G +LK+D +L GI ++G FDT+L Sbjct: 414 -----------SGPADLEAVRPLLEG-PAEKIGHHLKFDLEVLRANGIHVKGPFFDTLL- 460 Query: 446 SYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG--KNQLTFNQIALEEAGRYAAEDAD 503 ++ L + +H MD LAE L++ TI ++IA G K +L + + +E G+Y+AEDAD Sbjct: 461 AHALIAPGMKHGMDVLAENLLQYSTIKLKDIAAPGAKKRELDTSGVPVEVMGKYSAEDAD 520 Query: 504 VTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRL 563 +TLQL + + K G +F +E+PL+PVL+ +E +G+++ P+ L S ++ + Sbjct: 521 ITLQLSAVLKRQV-KESGMEKLFRTVELPLLPVLADMEFSGIRVLPESLEKASVKVGAII 579 Query: 564 AELEKKAHEIAGEEFNLSSTKQLQTILF-EKQGIKPLKKTPGGAPSTSEEVLEELALDYP 622 L ++ E AG NL+S KQL LF E + +K KKT G T E+ L LA +P Sbjct: 580 DGLRERIEEAAGHPLNLNSPKQLGDFLFGELELVKKPKKTKTGQFVTDEDTLSALAPQHP 639 Query: 623 LPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVR 682 + IL YR KLKSTY D LP I P+ GR+HT +HQ +TATGRL+S DPNLQNIPVR Sbjct: 640 IIADILAYRENMKLKSTYLDALPKYICPRDGRIHTQFHQMLTATGRLASQDPNLQNIPVR 699 Query: 683 NEEGRRIRQAFI-APEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEV 741 E+GR IR AF+ A E Y ++SADYSQIELRIMA LS D + AF EG+DIH TAA V Sbjct: 700 TEQGRLIRTAFVPASEKYTMLSADYSQIELRIMAALSGDPAMCGAFREGRDIHTETAARV 759 Query: 742 FGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEY 801 +G+P + V + RR+AK +NFG+IYG+SAFGL+++L PR EA ++ YF ++P V + Sbjct: 760 YGIPRDQVDAVMRRAAKTVNFGIIYGISAFGLSQRLGCPRGEAATLIENYFTQFPVVKSF 819 Query: 802 MERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMI 861 ME +A++ GY ETL GRR +P+I S+N ++AAER AIN P+QGTAAD+IK AMI Sbjct: 820 MEDLVHKAEQAGYAETLLGRRRMIPEINSANKTIKSAAERTAINTPIQGTAADMIKIAMI 879 Query: 862 AVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRL--DVPLLVEVG 919 VD L+ R R+I+Q+HDEL+ ++H+D++D + K I + M + L VP+LVE Sbjct: 880 HVDKLLKGT--RSRLILQIHDELLVDLHRDELDLIPK-IEEAMVSALPLPNGVPILVEAR 936 Query: 920 SGENWDQAH 928 +G NW +AH Sbjct: 937 TGGNWLEAH 945 >UniRef50_Q3Z6P9 DNA-directed DNA polymerase I n=5 Tax=Dehalococcoides RepID=Q3Z6P9_DEHE1 Length = 903 Score = 634 bits (1635), Expect = e-180, Method: Compositional matrix adjust. Identities = 365/926 (39%), Positives = 543/926 (58%), Gaps = 42/926 (4%) Query: 9 LILVDGSSYLYRAYHAFPPLT-NSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 ++L DG++ ++RAYH PPL GE GA +G ++L ++ KP A+ FD KG Sbjct: 6 IVLFDGTNLVHRAYHVLPPLAIRKTGEVVGAAFGFASILIKVLTDLKPDCYAISFDRKGP 65 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 TFR E+F+ YK+ RPPMPD+L +Q+ + +V A +P+ SG EADDV+GTLA A Sbjct: 66 TFRHEMFKAYKAQRPPMPDELVSQLGRVRQIVDAFNMPVYEQSGFEADDVLGTLATRAAA 125 Query: 128 AGRPVLISTGDKDMAQLVTPNITLI-----NTMTNTILGPEEVVN-KYGVPPELIIDFLA 181 AG V+I++GD D QLV P+I ++ + +T L E V KYG+ PE I D+ A Sbjct: 126 AGMEVIIASGDADSMQLVGPDIRILYPGPAGSFASTSLYDEVAVRAKYGLGPEHIADYKA 185 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGD SDNIPGVPG+G KTAQ L++ GG++ +Y +KI+ + KL N E Sbjct: 186 LMGDPSDNIPGVPGIGPKTAQKLIEEYGGIEDIYKNLDKIS------PPGLQKKLADNAE 239 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 VA S L TI D+ L+ + E+ + ++++ LF++ EF R + G+ Q +G Sbjct: 240 VARDSKILTTIVCDLPLDFSIEECRAEHYNRQKVVDLFRELEFFRLIDRLPGGEN-QLQG 298 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 P++ A + + D + + + +++L A A Sbjct: 299 T---------------PDMFAVASKVETRYMVADSQNIDSIVSRLANAKELALAVSGTPE 343 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 + + A L L+ + G A ++P + Q+ L LL DEK K N Sbjct: 344 EAMDARLTALALSSAAGDACFVPAEFIGSASEGQMFAAEGHSGLAALLGDEKISKTAHNA 403 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTI---TFEEIAG 478 KY +L + G ++G+ FDTM+ +++L G ++ ++ + +H I E I Sbjct: 404 KYLMNLLLSAGQAVKGLDFDTMIAAHLL----GEKNL-AIKDLVFEHFGIEIADIENILT 458 Query: 479 KGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLS 538 + + +F+++ L EA + AA D T +L L + + +++F +EMPL+P+L Sbjct: 459 RNGKKASFSEVQLSEAAQLAA---DYTFRLKGIFAAQLAETR-LMDLFARVEMPLLPILL 514 Query: 539 RIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKP 598 +ER G+ +D +L +E+ ++ +LE+ + AG FN+ S +QL ILF++ + Sbjct: 515 GMERTGIMLDTDLLKAMAEKTGRQIFKLEEDIYARAGHNFNIGSPQQLGRILFDELKLPV 574 Query: 599 LKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTS 658 +KKT G ST EVLEEL + + +ILEYR L KLKSTY D LP M+NP T R+HTS Sbjct: 575 IKKTKTGY-STGAEVLEELKGKHRIVDLILEYRMLVKLKSTYLDTLPRMVNPHTRRLHTS 633 Query: 659 YHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLS 718 ++Q TATGRLSS++PNLQNIPVR E GR IR+AFIAP V+++ DYSQI+LR++AHLS Sbjct: 634 FNQTRTATGRLSSSEPNLQNIPVRGEMGREIRRAFIAPPGTVLLAGDYSQIDLRVLAHLS 693 Query: 719 RDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLN 778 +D L+ AF +DIH ATAA + +P VT EQRR AK +NFG+IYGMS++GL + Sbjct: 694 QDPALIEAFQSDQDIHTATAARLLNIPPSKVTKEQRRLAKTVNFGVIYGMSSYGLEQATE 753 Query: 779 IPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAA 838 + +EA K++ YFE+YP V Y + Q + QGYVETL GRR Y+P+I S N R + Sbjct: 754 LSLEEADKFIKAYFEKYPRVAVYFSEIKQQVRTQGYVETLLGRRRYIPEINSPNRILRES 813 Query: 839 AERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAK 898 AER AIN P+QGT+ADIIK AM+ +D L+ E+ + R+++QVHDEL+FEV K ++ ++ Sbjct: 814 AERMAINMPVQGTSADIIKLAMVRLDEKLKEEKLKSRLLLQVHDELIFEVPKTELGRMSD 873 Query: 899 QIHQLMENCTRLDVPLLVEVGSGENW 924 + + M ++PL VE+ SG NW Sbjct: 874 LLVETMSGAVAFEIPLKVELKSGANW 899 >UniRef50_Q73M72 DNA polymerase I n=1 Tax=Treponema denticola RepID=Q73M72_TREDE Length = 936 Score = 632 bits (1630), Expect = e-179, Method: Compositional matrix adjust. Identities = 376/955 (39%), Positives = 557/955 (58%), Gaps = 52/955 (5%) Query: 6 QNPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 ++ + ++D +YR+Y AF PLTNS GE A++G L S+ +Y P D Sbjct: 2 KDTIYVLDAYGLIYRSYFAFISRPLTNSKGENVSAIFGFFKSLHSIFTEYNPKLFVTALD 61 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 + TFR E+++ YK+ R PDDL AQI+ + ++K LP + +G EADDVI ++A Sbjct: 62 SLTPTFRHEMYKEYKATRDKTPDDLHAQIDKIEEILKTFKLPTVRCNGFEADDVIASIAA 121 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI---LGPEEVVNKYGVPPELIIDFL 180 AEK GR ++ +GDKD+ QLV+ T++ E V ++GV P+ ++D L Sbjct: 122 LAEKEGRECVVISGDKDLMQLVSKTTTMLKPGKIKAWEGFDAENVKEEWGVYPDGMLDLL 181 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 +L+GDS+DN+PG+ GVG KTA LL+ LD +YA + G + K+E+ K Sbjct: 182 SLIGDSADNVPGIKGVGPKTAVKLLEEYKSLDGIYANTGNLKG-------ALKTKIEEGK 234 Query: 241 EVAYLSYQLATIKTDVELE-----LTCEQLEVQQPA----AEELLGLFKKYEFK------ 285 E AY S +L ++ DV +E + Q++ + A +EEL + K Y K Sbjct: 235 ESAYFSKELIRLRFDVPVEKDLNAYSTSQMDYEAAARLFISEELPNIAKLYSEKIIAEKN 294 Query: 286 ----RWTADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKA 341 + E G + ++ P PQE +E + + +Y + + E L Sbjct: 295 APSSKENLKQETGLFENSEQTSPEMLPQELGTGEE----ISLPQNKGDYKLVDEAEELFK 350 Query: 342 WIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDY----LDAPDQIS 397 + + K + ++D ET S D ++A + G S A++ G A Y P+ +AP I+ Sbjct: 351 IVDEALKQGLASYDCETTSEDPLNAEVCGFSLALKEGEAYYFPLKAPCPELGEEAPKLIA 410 Query: 398 RERALELLKPLLEDEKALKVGQNLKYDRGILANYGIEL-RGIA---FDTMLESYILNSVA 453 + A + + L D K + N K+D I A +L GI+ FDTM+ +++L+ Sbjct: 411 FKDAKKAVTKLF-DSKMTLIMHNGKFD--IQAALSSKLASGISANLFDTMIAAWLLDPAR 467 Query: 454 GRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMW 513 + MD LAE L KTI F+++ +G+N F+ I L+EA YAAEDAD+T + + K Sbjct: 468 SSYGMDKLAESILGVKTIRFKDLVKQGQN---FSDIPLKEACPYAAEDADITFRFYKKFL 524 Query: 514 PDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEI 573 P L+K+ +F ++EMP+ +L+ +E G+ + + L +S+EL L + EK + + Sbjct: 525 PLLKKNNLE-KLFFDLEMPITKLLTEMEIKGIFLKGEELTAYSKELGKELEDCEKDIYRL 583 Query: 574 AGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGL 633 G EFN++S KQLQ +LFE++ + P KKT G ST VLE LA + P+P IL+YR L Sbjct: 584 VGHEFNIASPKQLQEVLFEERKLTPGKKTKTGY-STDTSVLENLASEDPVPAKILDYRAL 642 Query: 634 AKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAF 693 AKLKSTYTD LP M + K GR+HTS+ Q TATGRLSS DPNLQNIP+R EGR+IR+AF Sbjct: 643 AKLKSTYTDTLPKMTD-KNGRIHTSFIQTGTATGRLSSRDPNLQNIPIRGNEGRKIREAF 701 Query: 694 IAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQ 753 A + V++SADYSQIEL I+AHLS+D+ L+ AF G D+H TA+ +F + ++ V+ + Sbjct: 702 QAEKGRVLISADYSQIELVILAHLSKDQNLVEAFNTGIDVHAKTASLIFAVDIKDVSQDM 761 Query: 754 RRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQG 813 RR AK INFG++YGMSAF LA L IPRK A +++ YF Y GV +M +A+++G Sbjct: 762 RRIAKTINFGVMYGMSAFRLASSLRIPRKRADEFIKAYFATYSGVSGFMANVCQEAEQRG 821 Query: 814 YVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPR 873 YVETL GRR YLP I S N +A AER A+N P+QGTAADI+K AM+ VD L+ ++ Sbjct: 822 YVETLMGRRRYLPAINSKNKVEKAGAERIAVNTPIQGTAADIVKLAMLEVDKALKKQKLD 881 Query: 874 VRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 +++QVHDEL+ E + + + V + + ME +L VPL V + SG +W + H Sbjct: 882 ASILLQVHDELIIEAAESEREKVMSLVKEKMEGVIKLSVPLRVSIESGMSWGEFH 936 >UniRef50_C0QYF7 DNA polymerase I n=3 Tax=Brachyspira RepID=C0QYF7_BRAHW Length = 920 Score = 632 bits (1629), Expect = e-179, Method: Compositional matrix adjust. Identities = 357/939 (38%), Positives = 542/939 (57%), Gaps = 36/939 (3%) Query: 6 QNPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + +++D LYR + F PL NS G+ ++ G + SLI Y + A+ D Sbjct: 2 KKTFLIIDAFGILYRYHFIFLKRPLLNSKGQNVSSINGFMRTYFSLINTYPAEYVAIALD 61 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 + KTFR+E+++ YK +R MPDDLR+QI L+ ++ A+G+ + + EADD++GT+A Sbjct: 62 SSRKTFRNEIYKEYKENRESMPDDLRSQIPILYNLIDALGISRIVLDNYEADDIVGTIAE 121 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTIL---GPEEVVNKYGVPPELIIDFL 180 +K +I + DKD+ QLV ++ ++ + + L + V K GV P IID L Sbjct: 122 RNKKENIKTIIYSPDKDILQLVDDDVKVVASNKDNELMEYDAQAVKEKRGVYPNQIIDLL 181 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 +LMGD+SDNIPGV GVGEKTA LL+ LD +Y + I G + KL ++K Sbjct: 182 SLMGDASDNIPGVKGVGEKTALKLLEEYKSLDGIYENIDSIKG-------KIQEKLLESK 234 Query: 241 EVAYLSYQLATIKTDVE-LELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEA------ 293 ++AY+SY+LATI+ ++E L ++ + +E+ + + E K+ + + Sbjct: 235 DMAYMSYKLATIERNIEGFNLDYNEIASSKINIDEVNKILDELELKQIRDKINSYIYGSS 294 Query: 294 GKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDN---YVTILDEETLKAWIAKLEKAP 350 K + K + S +EAP ++A DN Y I +E L+ + + Sbjct: 295 KKEDKVKISNDKINKDNDSKTEEAPILSAK----DNKSSYYLIENETELENLLKDINSKK 350 Query: 351 VFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLE 410 + D ET LD ++G+SFAI+ A Y+ L +I +++ + L+ LE Sbjct: 351 LVCIDFETTGLDTFKDTIIGISFAIKSNEAFYLD-----LSGRTKIDKDKCMNLVFDTLE 405 Query: 411 DEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKT 470 E +G NLKY+ ++ G + + FDTM+ +Y++N GR++MD LA +L + T Sbjct: 406 KEDIKVIGHNLKYEYKMMRAIGKSIGNMYFDTMVAAYLINPTRGRYNMDDLAIAYLSYNT 465 Query: 471 ITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIE 530 I + ++ K L L++ YA EDADVT + + P L+ H ++F NIE Sbjct: 466 IKYADLTDNAKKTLL--DAPLKDVVEYACEDADVTFRFYECFAPLLKTHNLE-DLFFNIE 522 Query: 531 MPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTIL 590 MPLV VL+ +E +GV I + + S+E + L + ++K ++ AGEEFNL S KQL+ IL Sbjct: 523 MPLVSVLADMEFDGVYISSERMKALSDEYSSLLEKTKEKIYKEAGEEFNLQSPKQLEYIL 582 Query: 591 FEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINP 650 F+K GI P KKT G ST EEVL EL+ Y + + +L YR AKLK+TY D P +IN Sbjct: 583 FDKMGIPPTKKTKTGF-STDEEVLTELSQKYKIAEYMLTYRKYAKLKNTYLDVFPTLINE 641 Query: 651 KTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIE 710 KTGR+H S++Q VTATGRLSS++PNLQNIPVR EEGR IR FI + ++++ADYSQIE Sbjct: 642 KTGRIHASFNQTVTATGRLSSSEPNLQNIPVRGEEGREIRNTFIPEKGNLLIAADYSQIE 701 Query: 711 LRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSA 770 LR++AH S D L+ AF DIHR TA +++ + E VT+ R AK INF +IYG +A Sbjct: 702 LRLLAHFSNDPTLVEAFKNNDDIHRKTAMKIYSVSKEHVTASMRNIAKIINFSIIYGKTA 761 Query: 771 FGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGR-RLYLPDIK 829 FGL+++L I RKEA+ ++ YF Y V + E + + +G+V T+ GR R I Sbjct: 762 FGLSKELGIKRKEAEDFIKGYFSTYSRVKPFCEEVVEEVRNKGFVRTMCGRIRDLSKTIN 821 Query: 830 SSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVH 889 SSN R AER A+N +QG+AAD+IK AM+A+ + +++MQVHDELV EV Sbjct: 822 SSNAMARNEAERMALNTLIQGSAADMIKVAMVAIHKEFKNHLKTAKIVMQVHDELVVEVS 881 Query: 890 KDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 + + D + ++ME+ + +VP++V++ G +W + H Sbjct: 882 EAEADKAMTIMKEIMEHSVKANVPIIVDIHKGNSWGEVH 920 >UniRef50_C6XHK7 DNA polymerase I n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XHK7_LIBAP Length = 976 Score = 632 bits (1629), Expect = e-179, Method: Compositional matrix adjust. Identities = 367/986 (37%), Positives = 559/986 (56%), Gaps = 80/986 (8%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSA-GEPTGAMYGVLNMLRSLIMQYKP----THAAV 60 +N L LVDGSS++YRA++A P L+ G P A+ G NML L+ + +H AV Sbjct: 4 ENHLFLVDGSSFIYRAFYATPLLSRKHDGLPVNAIAGFCNMLWKLLQNSRKESIASHFAV 63 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 +FD TFR+E++ YK++RP +P+ L Q+ + +A G+P + + G EADD+I T Sbjct: 64 IFDYPAVTFRNEIYPDYKANRPKIPEMLLPQLPLVRLATQAFGIPAIEIQGFEADDIIAT 123 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL 180 AEK G V I + DKD+ QLV+P L +T+ + E V+ K+G+PPE ++ Sbjct: 124 YTYIAEKEGFAVTIISTDKDLMQLVSPTTCLYDTVKEEKIDIEHVIKKWGIPPEKMVCLQ 183 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 AL GDS DNIPG+PG+G KTA LLQ G L+ + +I K + + Sbjct: 184 ALTGDSIDNIPGIPGIGYKTAALLLQEYGNLENILINASRIK------QKKRRENILEYA 237 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 E A LS +L ++TDV + + E L ++ L+ K EF + V A Sbjct: 238 ETARLSRKLVMLRTDVPITIPLEHLILEDCNGPRLISFLKALEFTKLINRVATTYDCDAA 297 Query: 301 GAKPAA------------------------KPQETSVADEAPEVTATV------------ 324 +P Q +S++D+ ++ + Sbjct: 298 NIEPVVLDINTTENKGIAIETEIDRDTTIKTSQFSSLSDQTSKINSEQTPQKLFLERLQK 357 Query: 325 -----ISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGL-------- 371 I+ D+Y I++ + ++ W+ KLE +F TD++D + + + Sbjct: 358 LSQYPINNDSYTKIVNTKDIQQWVQKLETIGSASFKIITDTMDAFHSKPIAIAISTLDQK 417 Query: 372 ---SFAIEPGVAAYIPVA-HDYLDAP--DQISRERALELLKPLLEDEKALKVGQNLKYDR 425 SF +E +I ++ H D+ + +++E L LK E+E LK+G N+KYD+ Sbjct: 418 DDTSFKVE---TIFIDLSVHTSQDSTGKNTLTKE-ILSYLKKFFENEHFLKIGHNIKYDK 473 Query: 426 GILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLT 485 +L YGI +RG D ML SY+L+S HD+ S+A++WL + T +EI K+ + Sbjct: 474 LVLHRYGISMRGFE-DIMLMSYVLDSGRSSHDIASIAQKWLSY---TRKEILKSRKSSIP 529 Query: 486 FNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGV 545 ++I+ + +A E+++V LQL L + P L K L+V+E ++ P++ V+S++E G+ Sbjct: 530 IDKISDSQVQEHAIENSNVILQLWLLLRPKLIVEKL-LHVYERLDKPMIDVVSQMEITGI 588 Query: 546 KIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGG 605 +ID +L S E++ L LE+ ++++GE+FNLSS KQL ILF K KT G Sbjct: 589 QIDQDLLKQVSAEISKNLLSLEENIYDLSGEKFNLSSPKQLGDILFTKLKFPSGAKTKTG 648 Query: 606 APSTSEEVLEELAL-DYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVT 664 T+ + LE++ D P+ K ILE+R L+K+KSTY D LP IN +T RVHT Y A T Sbjct: 649 QWKTTAQDLEQINCGDNPIIKNILEWRQLSKIKSTYADSLPNHINKRTQRVHTFYSLAST 708 Query: 665 ATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLL 724 TGRL+S +PNLQNIP++ + G++IR+AFI+P ++SADYSQIELRI+AH+++ L Sbjct: 709 MTGRLASLEPNLQNIPIKTDLGQKIRRAFISPPTKKLISADYSQIELRILAHIAKITPLY 768 Query: 725 TAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEA 784 F DIHR AAE+FG+ +E V+ + RR AK INF +IYG+S F LA QL IPR EA Sbjct: 769 QVFENSLDIHRMVAAEIFGVNIEKVSPQMRRHAKTINFSIIYGISPFRLATQLRIPRSEA 828 Query: 785 QKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAI 844 Y+ YF R+PG+ EY+E+T+ ++ GYVET+ GRR++ +I S + R ERAAI Sbjct: 829 ADYIKRYFHRFPGIHEYIEKTKNFVRQNGYVETIFGRRIHYDEINSPKSSIRNINERAAI 888 Query: 845 NAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI-HQL 903 NAP+QG+AADI +RAMI+V L+ + +M++Q+HDELVFEV ++++ ++ I H + Sbjct: 889 NAPIQGSAADITRRAMISVHKSLEDHKLATKMLLQIHDELVFEVPEEEITTASQIIVHSM 948 Query: 904 MENC---TRLDVPLLVEVGSGENWDQ 926 + C L VPL V + NW + Sbjct: 949 EKACLPKINLRVPLKVNIKVSNNWQE 974 >UniRef50_A6G5W6 DNA polymerase I n=2 Tax=cellular organisms RepID=A6G5W6_9DELT Length = 933 Score = 626 bits (1614), Expect = e-177, Method: Compositional matrix adjust. Identities = 390/947 (41%), Positives = 546/947 (57%), Gaps = 44/947 (4%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG-K 67 + LVD +++L+RAYHA P LT G P A++G + M++++ ++ P H VFDA G K Sbjct: 1 MFLVDANNFLFRAYHALPMLTAPDGRPVNAVHGYVRMVQAIRKEFAPQHLLAVFDASGSK 60 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 +R EL+ YK++RPP P+DL+ QI + A+ +P L EADD+I + + Sbjct: 61 GWRRELYAEYKANRPPPPEDLQPQIPLVREATDALSIPWLEDPRYEADDLIARYVQAGVE 120 Query: 128 AGRPVLISTGDKDMAQLVTP-------NITLINTMTNTILGPEEVVNKYGVPPELIIDFL 180 A V+I + DKD+ QLV ++ L +TM N +GP EVV K+GV PE + D L Sbjct: 121 AKLEVVIVSSDKDLMQLVAGPDDVREGSVRLWDTMKNRRVGPAEVVAKFGVGPEKLGDLL 180 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 AL GDSSDNIPGV G+G KTA +LL+ G L+ + + +KI K LE Sbjct: 181 ALAGDSSDNIPGVKGIGPKTATSLLETYGDLEGILSNTDKIK------QKKRRENLETYA 234 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFK-RWTADVEAGKWLQA 299 E A +S +L ++TD +L E + + P + F FK T V AG + Sbjct: 235 EDARMSRKLVALRTDYDLPRPIEDVADKGPKRATMEAFFTPLGFKATLTGAVRAGGGSRR 294 Query: 300 KGAKP----AAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFD 355 + AK +E V EA EV ++ D TL A++A+ A AF+ Sbjct: 295 VAPRTLVETIAKIKELEVDREAVEV----LNADEAGVA----TLDAFLAQARAAEGLAFE 346 Query: 356 TETDSLDNISANLVGLSFAI------EPGV----AAYIPVAHDYLD--APDQISRERALE 403 E D + A+ +GL+ AI PG Y+P+AH L A Q L Sbjct: 347 LELSGDDPLRADPIGLALAIPKAKAEAPGALERAPIYLPMAHRSLSDGAVQQWKPSEVLA 406 Query: 404 LLKPLLEDEKALKVGQNLKYDRGIL--ANYGIELRGIAFDTMLESYILNSVAGRHDMDSL 461 + PLL D K K LK + +L A+ +E+R + DT+L SY L+ H+++ L Sbjct: 407 KVGPLLSDAKLPKYTHALKDQQVVLSRADLNVEVRNVVGDTLLASYTLDPARSDHNLEGL 466 Query: 462 AERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQK-HK 520 A+ E I GKGK ++ F+Q+A+ AG +A E A + L M + + Sbjct: 467 AKDIGGRLVGDRESIVGKGKKRVGFDQVAVAVAGPWAGERAGLAATLGPHMVAAAKAAGE 526 Query: 521 GPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNL 580 ++ +E+PL VL+R+ER GV +D L ++EL ++ L+ E AG + Sbjct: 527 QTQKLYAEVELPLARVLARLERRGVLLDEAELQRQNDELGGQIDALKSTLQEEAGYAVDP 586 Query: 581 SSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTY 640 +S KQL +LFE++G+ KKT G ST + LEEL+L P+ KVIL+YR LAKLK+TY Sbjct: 587 NSPKQLGKLLFEERGLPAKKKTKTGY-STDAQTLEELSLLDPIVKVILDYRSLAKLKNTY 645 Query: 641 TDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYV 700 D LP ++NP TGR+HT + QAV ATGRLSS +PNLQNIP+R E+GRRIR+ F+APE Sbjct: 646 LDTLPKLVNPNTGRLHTHFRQAVAATGRLSSREPNLQNIPIRTEQGRRIRRGFVAPEGMQ 705 Query: 701 IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAI 760 +V+ DYSQIELR++AHLS+D L+ AF +G D+HR TAAEVF +P VTSEQRR AKA+ Sbjct: 706 LVTLDYSQIELRVLAHLSKDPNLVKAFTDGADVHRRTAAEVFEVPEAEVTSEQRRVAKAV 765 Query: 761 NFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDG 820 NFG+IYG SAFGLARQL IP+ A KY+ YF++ PGV YM AK+ G+ ET+ G Sbjct: 766 NFGVIYGQSAFGLARQLGIPQGRAGKYIKAYFKKIPGVSSYMNALIDTAKDTGFAETIFG 825 Query: 821 RRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQV 880 RR +P+++ R+ ER A N P+QG+AADI+K AM+ V+ L ++P RM++ V Sbjct: 826 RRRRIPELRRRGAVARSYGERIARNTPIQGSAADILKIAMVEVERLLD-DKPWARMLLTV 884 Query: 881 HDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 HDEL+FE D V + + ME LDVPLLVE G+G NW+ A Sbjct: 885 HDELIFECETDKVQELIGLVKPAMEKSASLDVPLLVEGGAGANWEDA 931 >UniRef50_A6FZM5 DNA polymerase I n=2 Tax=Deltaproteobacteria RepID=A6FZM5_9DELT Length = 898 Score = 624 bits (1609), Expect = e-177, Method: Compositional matrix adjust. Identities = 376/932 (40%), Positives = 532/932 (57%), Gaps = 52/932 (5%) Query: 9 LILVDGSSYLYRAYHAFPP-LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 LIL+D SS +YRAY+A P + + G T A+YG M R ++ +P AVVFDA GK Sbjct: 7 LILIDASSLIYRAYYAIPANFSTADGLHTNAIYGFATMFRKILSGRQPERGAVVFDAPGK 66 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 TFR+E + YK+ RP M +LR Q+ + +V+A P L V G EADD+IGTL R+A Sbjct: 67 TFREEQYPEYKAQRPRMDPELREQLPWVDKLVEAHRFPHLRVPGYEADDIIGTLTRQAVD 126 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSS 187 AG V I +GDKD AQL+ P + +I+T+ + E V K+GVPP L ID+LAL+GD Sbjct: 127 AGMEVYIISGDKDFAQLIGPTVRMIDTLRDVTFDAELVRKKWGVPPSLFIDYLALVGDKV 186 Query: 188 DNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSY 247 DNIPGVPG+G KTA+ LL G L+ + ++ G +LE N E A +S Sbjct: 187 DNIPGVPGIGPKTAKKLLDAYGDLEGVLTHTSELKG-------KQKERLEDNAEQARMSQ 239 Query: 248 QLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAK 307 +LATI T VELEL E L++ AA EL L+K+ EF ++ E AK AK Sbjct: 240 KLATIDTQVELELGLEDLKLVPVAAAELNALYKRLEFYSLLSEEEV--------AKGEAK 291 Query: 308 PQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTE--TDSLDNIS 365 Q + ++ + E L A +A L A T D+ + Sbjct: 292 AQVGA----------------DFGAVTSLEQLDALLASLPGPEDGAVATMAIVDAPSAVR 335 Query: 366 ANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDR 425 L GL+ ++ G +IP L + E L L+P LED K K+G + K Sbjct: 336 GELAGLALSVGAGHGRFIP-----LHCEGGLG-EAGLAKLRPWLEDPKRYKLGHDCKASW 389 Query: 426 GILANYGIELRGIAFDTMLESYIL--NSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQ 483 L G+ L GI DTM+ES+++ N + H +D L + +L+ + I G GK Sbjct: 390 VALRRKGVALAGIVGDTMIESFLVEPNKLI-PHRLDQLTKEYLQRTIPPQKRILGSGKRL 448 Query: 484 LTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERN 543 F+Q+ E + + +++ L +G + E + +PL VL ++E + Sbjct: 449 KRFSQLDAEALAPWCCTQVEAVAAAFVEIRERLDA-EGHRDTLEQVSLPLSWVLGQMELD 507 Query: 544 GVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTP 603 GV ID + L SEE RLA+LEK EIAG EFN++S+KQL +LF++ + +K+T Sbjct: 508 GVAIDSEDLGKMSEEFGERLAKLEKTIFEIAGREFNIASSKQLGAVLFDELELPVIKRTK 567 Query: 604 GGAPSTSEEVLEELALDYPLP-----KVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTS 658 G ST+ EVLE LA P K +LE+R LAKL +TYTD L +NP +GR+H + Sbjct: 568 TGY-STNAEVLERLAGKTKHPKHTIAKYLLEHRKLAKLINTYTDVLQAAVNPDSGRIHAT 626 Query: 659 YHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLS 718 + Q +GRL +T+P+LQ P++ EG+R+RQAF+ Y ++SAD+SQIELR++AH S Sbjct: 627 FQQTAGVSGRLITTEPDLQRTPIKTPEGKRVRQAFVTRPGYKLISADWSQIELRLLAHFS 686 Query: 719 RDKGLLTAFAEGKDIHRATAAEVF--GLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQ 776 D L+ AFA+G D+H TAA++F G E V+ EQR K +NF IYG A L + Sbjct: 687 SDAHLVEAFAKGLDVHARTAAQLFEVGGGPEKVSREQRGVGKLVNFATIYGQGATALGQI 746 Query: 777 LNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARR 836 L +PRK+AQ Y+D YF Y GV ++++ T AQA G+VETL GRR Y+P++ S+N R Sbjct: 747 LKVPRKQAQAYIDGYFAYYSGVRDWLDGTMAQANVDGFVETLLGRRRYIPELSSNNWQDR 806 Query: 837 AAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAV 896 A ER A N P+QG+AADI K AM+ +D L+A++ RM++Q+HDELVFE +V+AV Sbjct: 807 QAGERIAANTPIQGSAADICKLAMLGIDRQLRAQKLTTRMLLQIHDELVFEAPVAEVEAV 866 Query: 897 AKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 + ME+ L VPL+V+VG G+ W +AH Sbjct: 867 VAIVRGQMESVVELRVPLVVDVGVGDTWAEAH 898 >UniRef50_A7NJD5 DNA polymerase I n=2 Tax=Roseiflexus RepID=A7NJD5_ROSCS Length = 972 Score = 624 bits (1608), Expect = e-177, Method: Compositional matrix adjust. Identities = 389/976 (39%), Positives = 565/976 (57%), Gaps = 73/976 (7%) Query: 9 LILVDGSSYLYRAYHAFPP--LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L+L+DG + YRA+HA L +S GEPT A+YG + + + I +Y+P +AAV FD G Sbjct: 8 LLLIDGHALAYRAFHALAEAGLRSSTGEPTYAVYGFTSAMLNAIEEYQPEYAAVAFDV-G 66 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 KTFRD+L+ YK++R P + Q+E + ++ A +P+ G EADDVIGTLAR+A Sbjct: 67 KTFRDDLYAEYKANRAETPAEFEQQLERIKQVLAAFDIPIYTAEGYEADDVIGTLARQAT 126 Query: 127 KAGRPVLISTGDKDMAQLVTPNIT-LINT------MTNTILGPEEVVNKY-GVPPELIID 178 + G VLI TGD D QLV ++T L+N T G EV +Y G+ P + D Sbjct: 127 ERGVDVLILTGDTDTLQLVDDHVTVLLNNPYLRGPKNTTRYGVAEVTERYKGLRPHQLAD 186 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 L GD SDNIPGV G+GE A ALL G ++ LY ++ K LE Sbjct: 187 LRGLKGDPSDNIPGVKGIGEAGAIALLNQFGTIENLYDHLDE-------APKRYQKHLEG 239 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEF-----KRW------ 287 +++A S +LATI D + L + ++ +F++ EF KR Sbjct: 240 QRDIALFSKKLATIVCDAPVTLNLADATLADYDRSRVIAVFQELEFGASLVKRLPPSGST 299 Query: 288 --------TADVEAGKWLQAKGAKP--------AAKPQETSVADEAPEVTATVISY---- 327 +A LQA P +A+PQ+ ++ + PEV +++ Sbjct: 300 TVAQPLPSIPQADASAPLQADMFAPEAPAVRESSAEPQQLTLFGD-PEVVPPPVAHVEAP 358 Query: 328 -----DNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAY 382 Y + L+A +A+L AP+ AFDTET ++ + +LVGLS A PG A Y Sbjct: 359 LRAAPGEYRAACTDADLEAVVAELATAPLVAFDTETRGMNPLRDDLVGLSLATVPGRAWY 418 Query: 383 IPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDT 442 IPV H + Q+ R+R + L+ D KV N K+D +L G+ + G++FDT Sbjct: 419 IPVGHTTGEM--QLPRDRVIAALRSFFADPARPKVAHNAKFDIEVLERAGMPVAGLSFDT 476 Query: 443 MLESYILNSVAGRHDMDSLA--ERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAE 500 ML + +L+ R ++ LA E L ++ GKGKNQ+TF ++ + A RYAA Sbjct: 477 MLAAGLLDK---RRNLKDLAFYELELAEPLDAIGDLIGKGKNQVTFAEVPIARATRYAAA 533 Query: 501 DADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELT 560 DAD+TL+L + L+ ++F +EMPLVPVL R+E++G+ +D + E + Sbjct: 534 DADMTLRLQPALEAKLRAAGSLADMFYRLEMPLVPVLVRMEQSGILLDVPYMRALGERMG 593 Query: 561 LRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKP---LKKTPGGAPSTSEEVLEEL 617 LA++E++ IAG+ FN++S QL +LF + P L++T G S + + LEEL Sbjct: 594 RELAQIEQQIFAIAGKPFNINSGDQLSEVLFGPKINLPTTGLERTRTGRYSLTAQALEEL 653 Query: 618 -ALDYP-LPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPN 675 A D + ++IL +R L+KLKSTY D+LP ++NP+TGRVHT Y+Q ATGRLSS PN Sbjct: 654 QASDTTGIIELILRHRRLSKLKSTYVDELPALVNPETGRVHTDYNQLGAATGRLSSNSPN 713 Query: 676 LQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHR 735 LQNIP R EEGR +R+ FIA +V+++ADYSQIELR++AH++ D L+ F EG+DIH Sbjct: 714 LQNIPTRTEEGREVRRGFIAAPGHVLIAADYSQIELRVLAHITGDPNLIQTFIEGRDIHA 773 Query: 736 ATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERY 795 ATAA +FG+ V QRR AK + FG+IYG+S FGLA++L I R++A+ +D F ++ Sbjct: 774 ATAARLFGVGFNAVDKNQRRIAKTVVFGVIYGISPFGLAQRLGISREQARNLIDSLFNQF 833 Query: 796 PGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADI 855 P + +Y++RT + +GYV++L GRR + D+++S G RR AAER AIN P+Q TAADI Sbjct: 834 PRIRDYIDRTLETGRNEGYVQSLFGRRRPMFDLRTS-GPRRQAAEREAINHPIQSTAADI 892 Query: 856 IKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTR-----L 910 +K AMIAVDA L+ + R RM++QVHDEL+FE + +VD V + + ME Sbjct: 893 MKLAMIAVDAELRRRRLRTRMLLQVHDELIFEAPEAEVDEVVALVRERMEGVLSDMHPPF 952 Query: 911 DVPLLVEVGSGENWDQ 926 VPL VE+ G NW++ Sbjct: 953 AVPLRVEIEKGSNWEE 968 >UniRef50_B3TC83 Putative DNA polymerase family A n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC83_9ZZZZ Length = 891 Score = 623 bits (1607), Expect = e-177, Method: Compositional matrix adjust. Identities = 370/924 (40%), Positives = 530/924 (57%), Gaps = 41/924 (4%) Query: 4 IPQNP-LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 +P P L L+DG++ +YRAYHA LT G T A+YG + MLR L+ +P A F Sbjct: 1 MPSTPRLFLIDGNNQMYRAYHALHGLTGPDGRSTNAVYGFITMLRKLLSDQQPDLVAAAF 60 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 D KG TFR EL YK+ R PMP+DL Q+ +H A+G+P++ +G EADDVIGTLA Sbjct: 61 DLKGPTFRHELAADYKATRRPMPEDLVEQVSWVHEACAALGVPVVTHAGFEADDVIGTLA 120 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEE-VVNKYGVPPELIIDFLA 181 +A AG V++ TGDKD QLV I + N + V+ K+GV P+ ++D LA Sbjct: 121 TQAVAAGLEVVVVTGDKDFFQLVGDRIRVFNPRDEGAWYDDAGVLEKFGVRPDQVVDVLA 180 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGD+SDN+ GVPG+GEK A+ LL G LD L +++ +R A L ++ + Sbjct: 181 LMGDASDNVKGVPGIGEKGARELLADFGSLDWLLDHADELPKKKYRTA------LTEHAD 234 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 A S +L + TDV + E+ + LF + FK Sbjct: 235 NARRSRELVRLVTDVPVPYEPERYRYRGADRTRCFTLFSELGFK---------------- 278 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 + V++ AP TA + D Y + D L+A A L ++ T S Sbjct: 279 ---------SLVSEFAP--TADSVDTD-YRMVTDVAELEALAAALRESGRCGLHVLTVSG 326 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 +VGL+F+ A+Y+P+A D LD + L P+LED + K+G +L Sbjct: 327 PPTRGGVVGLAFSTAARSASYVPLAQDGLDLTGSLDGGTVFGTLGPMLEDPQVRKIGHDL 386 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 K D LA + I LRG+ DTM+ SY+L++ ++++A ++ +T + + GKG Sbjct: 387 KRDMLWLAAHEIRLRGLELDTMIASYLLDATRTTPTVETVALEHAGYQALTADTVRGKGA 446 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 F+++ + YA E AD+ LQ + L + + ++ +E PL+PVL+ IE Sbjct: 447 KAPDFDRLPPDGVLAYACERADLPLQAAEPLRARLDQER-LAELYRELEQPLIPVLADIE 505 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 G+++ L S + L+EL+ + + +AGEEFN++S +QL ILFEK + KK Sbjct: 506 TAGIQVATDALAVQSRRMDADLSELQSQIYTLAGEEFNINSPRQLSAILFEKLALPTRKK 565 Query: 602 T-PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 T A ST+ +VLEELA + LP++++E+R + KLK TY D LP ++ P TGRVHTS++ Sbjct: 566 TGKTRAASTAADVLEELAQHHALPRLVIEWRAVQKLKGTYVDALPQLVRPDTGRVHTSFN 625 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRD 720 QAV ATGRLSS+DPNLQNIP+R GR IR+AF+A + +V++SADYSQIELR++AHLS D Sbjct: 626 QAVAATGRLSSSDPNLQNIPIRTPLGREIRRAFVARDGHVLISADYSQIELRVLAHLSAD 685 Query: 721 KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 L AF +DIH TA VFG E RR AK IN+ L+YG +AF L+R + + Sbjct: 686 TALTQAFIRNEDIHDKTALHVFGPDSGLDAHELRRRAKIINYALLYGKTAFTLSRDIGVT 745 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 + AQ ++D YFE YP V +++ +A+E G V T+ GRR +P++++ NG RAAAE Sbjct: 746 PQAAQAFIDAYFEGYPAVRGFLDGVIDEARESGEVRTMFGRRRLVPELRNRNGQIRAAAE 805 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 R +N P+QGTAADI+KRAMI + L P MI+ VHDEL+ E +D+ D+VA + Sbjct: 806 RVTVNMPIQGTAADILKRAMIDLAGALPPSAP---MILTVHDELLIEPPRDEADSVADLV 862 Query: 901 HQLMENCTRLDVPLLVEVGSGENW 924 ME L VPL V+VG GENW Sbjct: 863 RDRMERAADLTVPLRVDVGIGENW 886 >UniRef50_Q0AVE2 DNA polymerase I n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AVE2_SYNWW Length = 866 Score = 620 bits (1599), Expect = e-176, Method: Compositional matrix adjust. Identities = 374/924 (40%), Positives = 540/924 (58%), Gaps = 70/924 (7%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 + IL+DG+S LYRA++A P L NSAG T +YG L M ++ + +PTH AV FD Sbjct: 3 DKFILIDGNSLLYRAFYALPLLHNSAGVYTNGVYGFLTMFNRVLAEIQPTHIAVAFDKDR 62 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 TFR+EL+ YK++R P++L Q + L ++ A+ + L + G EADD+IGTL+++AE Sbjct: 63 STFRNELYSEYKANRSAPPEELGGQFQLLRDVLAALNIEYLEMQGYEADDIIGTLSKKAE 122 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPELIIDFLAL 182 + G +I TGD D QLV+ + ++ T + P+ V +K+GV PE +++ L Sbjct: 123 EQGLKTVILTGDGDALQLVSEQVEVLLTKKGISEMELYDPQGVKDKWGVEPEKMVEIKGL 182 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 MGD+SDNIPGVPGVG KTA L+Q L+ LY ++ G K + KLEQN+E Sbjct: 183 MGDASDNIPGVPGVGPKTAMKLVQEFTSLENLYENLPQVKG------KKLVEKLEQNREQ 236 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A+LS QLATI D+EL+ + E +++P ELL L++ EF + K LQ K Sbjct: 237 AFLSRQLATINRDMELDFSIEDYVMREPHYPELLELYRSLEFNNFL------KILQEK-- 288 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 +E +A E+ + + VT L EE +++ A ++ Sbjct: 289 -----EREKGMAPLKQEIEVLFLEREEDVTALLEE--------IKQGESVALYFQSSYHH 335 Query: 363 NISANLVGLSFAIEPGVAAY-IPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 + A+L G+ V + DY L+ +K LLE K N Sbjct: 336 PMWASLQGVFLEYSERVYQLKLEAGDDY-----------KLQWIKALLESAVIKKYLHNA 384 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 K+ + +L +GIELRG+A DTML +Y+ + ++D+ + KH + E Sbjct: 385 KFIQVLLLRHGIELRGVAGDTMLLAYVDDPAFEGDELDACLK---KHLQLNIAE------ 435 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 N L AL R ++ QL ++ +L++ + + +EMP+ VL+R+E Sbjct: 436 NNLA----ALVNTIR------ELYFQLEGQIPAELRE------LLQEVEMPMSEVLARME 479 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 GVK++ L SEEL +A E++ E+AG FN++S KQL +LFE G++ +KK Sbjct: 480 FCGVKVERSTLARISEELASGIAGHEERIFELAGSSFNINSPKQLGKVLFEDLGLRVIKK 539 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 G ST EVLEEL ++ + IL YR L+K+KSTY D L +I+P+TGRVHT + Q Sbjct: 540 GKTGY-STGAEVLEELYQEHEIIAHILNYRQLSKIKSTYADALQELIHPETGRVHTIFKQ 598 Query: 662 AVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQIELRIMAHLSRD 720 A TATGRLSS +PNLQNIP+R EEGRRIRQAF+AP D++I++ADYSQI+LR +AH+S D Sbjct: 599 AQTATGRLSSVEPNLQNIPIRMEEGRRIRQAFVAPGPDWLIMAADYSQIDLRSLAHISGD 658 Query: 721 KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 + L+ F G DIH TA E+F +P+E V SE RR AKA+NFG+IYG+S FGLAR + Sbjct: 659 ERLIETFKSGVDIHTRTAVEIFHVPVEWVDSELRRRAKAVNFGIIYGISDFGLARDTGVS 718 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 RKEA+KY+D Y YPGV +YME + GYVETL RR YLP++ + N +A Sbjct: 719 RKEARKYIDNYLNSYPGVKKYMEDIVEFGRRHGYVETLLKRRRYLPELNARNKMVQAFGR 778 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 R A+N P+QGT+ADIIK AMI VD ++ + + R+++QVHDEL+ E+ + +++ V+ + Sbjct: 779 RMALNTPVQGTSADIIKLAMIKVDEEIRKRRLQARLLLQVHDELLLELPRTELEEVSGLL 838 Query: 901 HQLMENCTRLDVPLLVEVGSGENW 924 MEN L VPL V + +G NW Sbjct: 839 RDCMENACSLKVPLEVSLKTGPNW 862 >UniRef50_A7HJZ2 DNA polymerase I n=11 Tax=Bacteria RepID=A7HJZ2_FERNB Length = 898 Score = 620 bits (1599), Expect = e-176, Method: Compositional matrix adjust. Identities = 374/940 (39%), Positives = 547/940 (58%), Gaps = 82/940 (8%) Query: 9 LILVDGSSYLYRAYHAF-PPLTNSAGEPTGAMYGVLNMLRSLIMQY---KPTHAAVVFDA 64 + L DG+ LYRAY A LT ++G PT A+YG+ ML + ++ + A + D Sbjct: 4 VFLFDGTGLLYRAYFAIDQSLTTTSGVPTNALYGLSRMLVKFLKEHVIINEDYCAFMLDV 63 Query: 65 KG-KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 KG T+R EL+ YK+HRP P+ L QI +++ G+ L+ V G EADDVI TLA+ Sbjct: 64 KGGSTYRKELYADYKAHRPETPEPLLKQISLADELIEGFGIKLIKVPGYEADDVIATLAK 123 Query: 124 EAEKAGRPVLIS-----TGDKDMAQLVTPNI---------TLINTMTNTILGPEEVVNKY 169 + EK + IS T DKDM QLV NI T + TN E++ KY Sbjct: 124 KFEKEKQKYNISEINIITSDKDMLQLVNENIFVWRVEKGVTDLKKYTNN-----EIIEKY 178 Query: 170 GVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLG----GLDTLYAEPEKIAGLS 225 G+ E I D+LAL+GD SDNIPGV G+GEKTA +L G L + PEKI Sbjct: 179 GITSEQIKDYLALVGDVSDNIPGVSGIGEKTAAKILNEFGSVENALKNISKLPEKI---- 234 Query: 226 FRGAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFK 285 R A +E N E LS +L + T+VE+++ E+L + ++LL + KK+EF Sbjct: 235 -RNA------IENNIEDFELSRKLVELNTNVEIKIDIEELLYKGYDQKKLLNVLKKFEF- 286 Query: 286 RWTADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAK 345 +SV E ++A + + Y I +E L + Sbjct: 287 -------------------------SSVIKEL-NLSAELTNKVEYKVIENERALSDLLET 320 Query: 346 LEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELL 405 + K+ A D ET SLD +VG+S A++ G A YIP+AH I E + L Sbjct: 321 IMKSKKIALDLETTSLDPFEGKIVGISIAVDEGKAFYIPIAHV---GAKNIPIESVKKFL 377 Query: 406 KPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERW 465 + L K + G N+K+D ++ GIE + +FD+M+E+Y+LN + ++D L+ + Sbjct: 378 RDLFNSGKTVG-GHNIKFDLKFISRLGIEPQIPSFDSMIEAYLLNPNEKKFNLDELSLKL 436 Query: 466 LKHKTITFEEIAGKGKNQL-----TFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHK 520 L HK I++E++ K+ + F+ I ++ A +Y+ EDAD++L++H + P + + Sbjct: 437 LGHKMISYEDLV---KDTIPLFAGDFSYIPVDTAVKYSCEDADMSLRIHNLLHPLI--YS 491 Query: 521 GPLN-VFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFN 579 +N ++E IE+P++ VL+ +E NGV D + L+N S+E+ +L L + EI GE FN Sbjct: 492 NEMNELYEKIELPMILVLANLELNGVYFDIQYLNNLSQEMDKKLLALSNRIFEITGEAFN 551 Query: 580 LSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKST 639 L+S KQL ILFEK + +K T GA ST EVLE LA +Y + K+ILEYR + KLKST Sbjct: 552 LNSPKQLGYILFEKLKLPSVKSTSTGAYSTDVEVLEYLANEYEIAKLILEYRKIQKLKST 611 Query: 640 YTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPED- 698 Y D +P M+N T RVH S++Q TATGRLSS+DPNLQN+P R++EG+ IR A +D Sbjct: 612 YVDAIPNMVNKNTKRVHASFNQTGTATGRLSSSDPNLQNLPGRSDEGKEIRMAVKPQKDG 671 Query: 699 YVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAK 758 + I+ ADYSQIELR++AH++ D L+ AF E KDIH TA ++FG+ E +T RR K Sbjct: 672 WYILGADYSQIELRVLAHITEDPNLINAFKENKDIHLETAKKLFGVSEEFITENMRRIGK 731 Query: 759 AINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETL 818 +NF ++YG+S +GLA++ + K+ +K ++ Y + Y V EYM + AK+ GYV T+ Sbjct: 732 MVNFAIVYGVSPYGLAKRTGLDVKDTKKMIEAYLDYYKNVQEYMANIKEFAKKNGYVRTM 791 Query: 819 DGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIM 878 GR+ +P I S + RA ER AIN P+QG+AADI+K AMI + L+ E+ + MI+ Sbjct: 792 FGRKRDIPQINSKDQNIRAEGERIAINTPIQGSAADIMKIAMIRIYERLKDEKLQSMMIL 851 Query: 879 QVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEV 918 QVHDELVFEV +++V+ V K + + MEN +L VPLLV++ Sbjct: 852 QVHDELVFEVPENEVEYVKKLVKEEMENAVKLRVPLLVDI 891 >UniRef50_A7HD60 DNA polymerase I n=2 Tax=Cystobacterineae RepID=A7HD60_ANADF Length = 899 Score = 619 bits (1597), Expect = e-175, Method: Compositional matrix adjust. Identities = 366/927 (39%), Positives = 530/927 (57%), Gaps = 38/927 (4%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 L L+DGS +++RAYHA P L+ + G PT A+YG ML + ++ PTH +V DA K+ Sbjct: 4 LTLIDGSGFVFRAYHAIPHLSTTRGTPTNAVYGFTTMLLKALREHAPTHVVLVMDAGRKS 63 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR+E+ YK++RP PDDL+ Q + + A+ +P + GVEADDVI TLA A + Sbjct: 64 FRNEIDPAYKANRPEAPDDLQVQFPLVREVADALAVPRIEEPGVEADDVIATLASRAREQ 123 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNTI-----LGPEEVVNKYGVPPELIIDFLALM 183 G V++ TGDKD QLV ++L + M GP EV K GV P+ +I+++A++ Sbjct: 124 GWEVVVVTGDKDFGQLVDERLSLYDPMAEASGRGGWTGPGEVEKKLGVRPDQVIEYMAIL 183 Query: 184 GDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVA 243 GD DN+PG+PG+GE TA AL++ G ++ + PE+I RG + + K+ ++E Sbjct: 184 GDKIDNVPGIPGIGEVTAAALVRHFGTVEEMLRRPEEIKAALSRGGEKVKEKIVASEERI 243 Query: 244 YLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAK 303 + QL +++ D+ L Q E ++P + LF + EF R D+ Sbjct: 244 RKNRQLVSLRRDLVLPFAPGQFERRRPDEARVRALFSELEFSRLLKDL------------ 291 Query: 304 PAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDN 363 PA P + E + + ++ ++ + AP TD + Sbjct: 292 PAPPPTPRTERAELILDAGALAAAVAALSAAPAVGVRPVLGG--PAP------RTDPV-- 341 Query: 364 ISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKY 423 VGL+ A G A Y+P+ H YL AP Q+S E A L+PLL E K + K Sbjct: 342 -----VGLALA-GGGRAFYLPLRHQYLGAPAQLSAEEAAGALRPLLSGELP-KHAHDRKG 394 Query: 424 DRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEE--IAGKGK 481 + LA G+ L G DT L S +L H + +A + + A + Sbjct: 395 VQHALAQLGLALGGPGADTDLASRLLLPTRREHALADVARERIGCELPRDPSGGDAARKS 454 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 ++ + +E G +AA+ A L L + L+ +G L ++ ++E PLVPVL +E Sbjct: 455 ERVPVEGLEVERVGEWAAQCAASLLDLAPALERALES-EGLLPLYRDVERPLVPVLCEME 513 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 R G+ +D + S E + +LE + H AG FN++ST++L +LF + + LK+ Sbjct: 514 RAGILVDRAAMEGMSAEFGRTMQDLEARIHAAAGHPFNIASTRELAQVLFTELALPVLKR 573 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 G PST ++VLE+LA + LP+++LE+R LAKLK TY D LP +++P+ GR+HT++HQ Sbjct: 574 LKTG-PSTDQDVLEKLAEQHELPRLVLEHRALAKLKGTYVDALPQLVDPRDGRIHTTFHQ 632 Query: 662 AVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDK 721 A ATGRLSS+DPNLQNIPVR E RRIR AF+AP + ++SADYSQIELRI+AH S D Sbjct: 633 AGAATGRLSSSDPNLQNIPVRTELSRRIRAAFVAPPGWRLLSADYSQIELRILAHYSDDP 692 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 LL AF +D+H TAAE FG+ VTS+ RR AK +NFG+ YG+SAFGL+++L++P Sbjct: 693 ALLEAFRLREDVHTRTAAETFGVATGEVTSDMRRIAKVLNFGIAYGLSAFGLSQRLDLPG 752 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 EAQ +D YF RY GV Y+E+ A+ G TL GR +P+I + N A R AAER Sbjct: 753 AEAQGIIDRYFARYAGVRRYVEKAVEDARATGESRTLFGRARAMPEIAARNPALRNAAER 812 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 AIN P+QGTAADI+K AMI V L + R R+++QVHDELV EV +D++ V + Sbjct: 813 TAINTPIQGTAADIVKVAMIRVHDALAGDARRARLLLQVHDELVLEVPEDELAPVEALVR 872 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQAH 928 + M +L VPL VEVG G +W +AH Sbjct: 873 REMGGAAQLKVPLDVEVGVGHSWAEAH 899 >UniRef50_D2R075 DNA polymerase I n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R075_9PLAN Length = 966 Score = 618 bits (1593), Expect = e-175, Method: Compositional matrix adjust. Identities = 368/966 (38%), Positives = 533/966 (55%), Gaps = 63/966 (6%) Query: 5 PQNPL-----ILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAA 59 P+ PL ++D S +Y+ +HA P +T+ +G+P GA+ G + + LI + Sbjct: 10 PETPLGDSTVYVIDAHSLIYQVFHAMPEMTSPSGQPVGAVQGFVRDMLDLIENRSAEYIV 69 Query: 60 VVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIG 119 FD TFR ++E+YK HR MP DL++QI + + A+G+ L++ G EADD++ Sbjct: 70 AAFDHPSPTFRHTMYENYKVHRDEMPGDLQSQIPIIQQFLDALGITQLSIPGFEADDILA 129 Query: 120 TLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDF 179 TLA+ G L+ T DKD QL+ + ++N N I ++ +G+ P+ ++DF Sbjct: 130 TLAKRVASDGGRCLVVTSDKDCRQLINDRVQMLNLRKNEIFDDVALMATWGIRPDQVVDF 189 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 +L+GDS DN+PGVP +G K AQ LL L+ + ++++G + L+ Sbjct: 190 QSLVGDSVDNVPGVPLIGPKIAQELLAKYETLEGVLDNADQVSGAKRK------ENLKNF 243 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVE--AGKWL 297 ++ A+LS L +K D+E +L + V + E L+ L + F++ +E A + Sbjct: 244 RDQAFLSRDLVRLKNDMEFDLDWSSVRVGRYQIEMLMELCRACGFRQLLTRIEKLAKRGA 303 Query: 298 QAK--------------------------GAKPAAKPQETSVADEAPEVTAT-------- 323 AK AA Q + P+V A Sbjct: 304 PAKSSRSTGYSSSIPAPQRDRDTPPDELYAGTEAADSQTSPSGSLGPQVAAAPWEATYRR 363 Query: 324 VISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYI 383 V S D TI+DE ++ A DTET S+ A +VG SF G A Y+ Sbjct: 364 VESLDQLRTIIDE---------IKAAGSLVIDTETTSVQPRWAEIVGYSFCYRDGEAWYL 414 Query: 384 PVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTM 443 P+ + + +L +P+LED KVGQN+KYD +L + GIELRG AFDTM Sbjct: 415 PIRAPENEQALCLDATAVADLFRPVLEDPAIAKVGQNIKYDMVVLRSAGIELRGAAFDTM 474 Query: 444 LESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDAD 503 + Y+++ H++D LA R L H+ I E + G GK Q+ +Q+ L YAAEDA Sbjct: 475 VADYLIDPGERSHNLDELARRHLGHQNIEIESLIGTGKKQIRMDQVPLAAITDYAAEDAL 534 Query: 504 VTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRL 563 V +L + P L++ G + +F ++EMPLV VL+ +E G+K+D L S + + ++ Sbjct: 535 VPYRLLPILEPRLEQ-DGLVPLFRDLEMPLVEVLAELEHRGIKVDRARLVELSTDFSTKI 593 Query: 564 AELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPL 623 LE + + I EFN+ S QL +LFE + LKKT G PS EVLE+LA + L Sbjct: 594 TALENEIYAINHGEFNIDSRLQLAKLLFEDLKLPILKKTKTG-PSMDAEVLEDLARLHEL 652 Query: 624 PKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRN 683 PK +LEYR LAKL+STY D L +I+P TGRVHTS Q V ATGRLSS DPNLQNIPVR Sbjct: 653 PKKVLEYRHLAKLRSTYVDSLQELIHPVTGRVHTSLKQDVAATGRLSSQDPNLQNIPVRT 712 Query: 684 EEGRRIRQAFI-APEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVF 742 EGR IR AF E + +++ADYSQIELR++AH S D L AFA +DIH A++V+ Sbjct: 713 AEGRAIRSAFQPGIEGWKLMAADYSQIELRVLAHFSGDAALAEAFASDRDIHTQVASQVY 772 Query: 743 GLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYM 802 + VT E RRSAKAINFG+IYG S FGLAR L I EA ++ YF +YPGV ++M Sbjct: 773 EVAPGDVTPEMRRSAKAINFGVIYGQSPFGLARSLGIENDEAAAFISAYFAQYPGVDDFM 832 Query: 803 ERTRAQAKEQGYVETLDGRRLYLPDIKSSNGA----RRAAAERAAINAPMQGTAADIIKR 858 T ++QGYV T+ GRR + ++ + +R ER AIN +QG+AADIIKR Sbjct: 833 RETLIGCRKQGYVTTIAGRRRPVTGVRDPHAVNDKRQRTLPERIAINTVIQGSAADIIKR 892 Query: 859 AMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEV 918 AMI V L+ E+ + RM++Q+HDEL+FE ++ + + + M ++ VPL ++V Sbjct: 893 AMITVHRRLKEEKLQARMLLQIHDELLFEFPPEEQGQLRDLVVESMSTAEKISVPLKIDV 952 Query: 919 GSGENW 924 +G NW Sbjct: 953 KTGLNW 958 >UniRef50_O08307 DNA polymerase I n=4 Tax=Chloroflexi (class) RepID=DPO1_CHLAA Length = 942 Score = 617 bits (1592), Expect = e-175, Method: Compositional matrix adjust. Identities = 377/943 (39%), Positives = 556/943 (58%), Gaps = 38/943 (4%) Query: 9 LILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L+LVDG + YRA+ A L +S GEPT A++G +L + + +Y+P +AAV FD G Sbjct: 6 LVLVDGHALAYRAFFALRESGLRSSRGEPTYAVFGFAQILLTALAEYRPDYAAVAFDV-G 64 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 +TFRD+L+ YK+ R P++ Q E + +V+A+ +P+ G EADDVIGTLAR+A Sbjct: 65 RTFRDDLYAEYKAGRAETPEEFYPQFERIKQLVQALNIPIYTAEGYEADDVIGTLARQAT 124 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLI------NTMTNTILGPEEVVNKY-GVPPELIIDF 179 + G +I TGD D+ QLV ++ + + T+ E+V +Y G+ P+ + D Sbjct: 125 ERGVDTIILTGDSDVLQLVNDHVRVALANPYGGKTSVTLYDLEQVRKRYDGLEPDQLADL 184 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 L GD+SDNIPGV G+GEK A ALL+ LD L + + K L + Sbjct: 185 RGLKGDTSDNIPGVRGIGEKGAIALLKQFRSLDALLEQIDA-------APKRYQTLLREQ 237 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEF-------KRWTADVE 292 E A S QLATI TDV ++L E + ++ LF++ EF K+ + V+ Sbjct: 238 AEAARFSRQLATIVTDVPVQLDLEAARIGVYDRSAVMALFQELEFGVSSNLIKKLPSVVQ 297 Query: 293 AGKWLQAKGAKPAA----KPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEK 348 A + PAA P + S+ E + D L +++L Sbjct: 298 APTLAELPADLPAAPLTTAPTQLSLFAGESEPAQPTAEPPPVTIVRDATALADLVSRLRN 357 Query: 349 APVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPL 408 AP FAFDTE SL ++++LVG+S AI P YIPV H + Q+ + L P Sbjct: 358 APAFAFDTECTSLQPVASDLVGISIAIAPDTVCYIPVGHQ---SETQVPCGEVVTALAPF 414 Query: 409 LEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKH 468 + + K N K+D +LA GI++ G+AFDTM+ + +L G D+ + E L Sbjct: 415 FANPQQPKFAHNAKFDMEVLAGAGIKVSGLAFDTMIAAAMLGKRQGLKDL-AFYELKLPE 473 Query: 469 KTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFEN 528 T E++ G+G Q++F ++ +E+A YAA DA TL+L ++ L+ +++ Sbjct: 474 PPTTIEDLIGRGNKQISFAEVPVEQAAPYAAADALYTLRLTERLQRQLEAEPALHDLYYR 533 Query: 529 IEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQT 588 +E+PL+ VL+ +E G+++D + L R+A+L ++ ++ AG FN++S +QL Sbjct: 534 VELPLIEVLTDMELTGIRLDQEYLRELGRHFAQRIADLVERIYQQAGGPFNINSGQQLND 593 Query: 589 ILFEKQGIKP----LKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKL 644 +LF + GI P L K G S + EVLEEL+ YP+ IL YR L KLKSTY D L Sbjct: 594 VLFGRLGIDPRAHGLSKLKSGGYSITAEVLEELSQLYPIAADILTYRQLTKLKSTYIDAL 653 Query: 645 PLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSA 704 P ++NP+TGR+HTSY+Q ATGRLSS +PNLQNIPVR EEGR IR+AF+A + V+A Sbjct: 654 PDLVNPRTGRIHTSYNQLGAATGRLSSNNPNLQNIPVRTEEGREIRRAFVAEPGWRFVAA 713 Query: 705 DYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGL 764 DYSQIELR++AH+S D+ L+ AF +G DIH ATA+ +FG+ V QRR AK + FG+ Sbjct: 714 DYSQIELRVLAHMSGDENLIAAFQQGLDIHAATASRLFGVEPTAVDKNQRRVAKTVVFGV 773 Query: 765 IYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLY 824 IYG+SAFGLA++L I R A++ +D F ++PG+ Y+++T ++ GYV+TL GRR Sbjct: 774 IYGISAFGLAQRLGIERDLARQLIDNLFAQFPGIRRYIDQTLEFGRQHGYVQTLFGRRRV 833 Query: 825 LPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDEL 884 + D+++S ARRAAAER AINAP+QGTAAD++K AM+ V L+ + R R+++QVHDEL Sbjct: 834 MEDLRASG-ARRAAAEREAINAPIQGTAADLMKMAMVNVHRALREQGLRTRLLLQVHDEL 892 Query: 885 VFEVHKDDVDAVAKQIHQLMENCTR-LDVPLLVEVGSGENWDQ 926 + E +D+V+ A+ + +M + R L VPL V + G NWD+ Sbjct: 893 IAEAPEDEVEPAARLLRDVMSSVYRDLVVPLSVNLEVGPNWDE 935 >UniRef50_O34996 DNA polymerase I n=38 Tax=Bacteria RepID=DPO1_BACSU Length = 880 Score = 613 bits (1580), Expect = e-173, Method: Compositional matrix adjust. Identities = 381/926 (41%), Positives = 544/926 (58%), Gaps = 60/926 (6%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 + L+LVDG+S YRA+ A P L+N G T A+YG +L ++ KPTH V FDA Sbjct: 4 RKKLVLVDGNSLAYRAFFALPLLSNDKGVHTNAVYGFAMILMKMLEDEKPTHMLVAFDAG 63 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 TFR F+ YK R P +L Q+ + ++ A + + EADD+IGTLA+ A Sbjct: 64 KTTFRHGTFKEYKGGRQKTPPELSEQMPFIRELLDAYQISRYELEQYEADDIIGTLAKSA 123 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINT---MTNT-ILGPEEVVNKYGVPPELIIDFLA 181 EK G V + +GDKD+ QL T T+ T +T+ PE V KYG+ PE IID Sbjct: 124 EKDGFEVKVFSGDKDLTQLATDKTTVAITRKGITDVEFYTPEHVKEKYGLTPEQIIDMKG 183 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGDSSDNIPGVPGVGEKTA LL+ ++ L ++++G K + KLE+ K+ Sbjct: 184 LMGDSSDNIPGVPGVGEKTAIKLLKQFDSVEKLLESIDEVSG------KKLKEKLEEFKD 237 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 A +S +LATI TD +E++ LE Q E+++ +FK D+ L+ G Sbjct: 238 QALMSKELATIMTDAPIEVSVSGLEYQGFNREQVIAIFK---------DLGFNTLLERLG 288 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 A Q+ S+ D + T T ++ D V+ P AF E Sbjct: 289 EDSAEAEQDQSLEDINVK-TVTDVTSDILVS-----------------PS-AFVVEQIGD 329 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 + ++G S E G A +IP I+ E E+ K +E+++ K + Sbjct: 330 NYHEEPILGFSIVNETG-AYFIP---------KDIAVES--EVFKEWVENDEQKKWVFDS 377 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG- 480 K L GIEL+G FDT+L +YI+N D+ S+A+ + H + E + GKG Sbjct: 378 KRAVVALRWQGIELKGAEFDTLLAAYIINPGNSYDDVASVAKDYGLHIVSSDESVYGKGA 437 Query: 481 KNQLTFNQIALEEAGRYAAEDADVTLQ-LHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 K + + E GR A + +Q L K+ +L+ + L +FE +EMPL +L Sbjct: 438 KRAVPSEDVLSEHLGRKA-----LAIQSLREKLVQELENND-QLELFEELEMPLALILGE 491 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 +E GVK+D L EEL +L E E+K HEIAGE FN++S KQL ILFEK G+ + Sbjct: 492 MESTGVKVDVDRLKRMGEELGAKLKEYEEKIHEIAGEPFNINSPKQLGVILFEKIGLPVV 551 Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 KKT G STS +VLE+LA + + IL+YR + KL+STY + L + P + +VHT + Sbjct: 552 KKTKTGY-STSADVLEKLADKHDIVDYILQYRQIGKLQSTYIEGLLKVTRPDSHKVHTRF 610 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE-DYVIVSADYSQIELRIMAHLS 718 +QA+T TGRLSSTDPNLQNIP+R EEGR+IRQAF+ E D++I +ADYSQIELR++AH+S Sbjct: 611 NQALTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSEKDWLIFAADYSQIELRVLAHIS 670 Query: 719 RDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLN 778 +D+ L+ AF DIH TA +VF + + VTS RR AKA+NFG++YG+S +GL++ L Sbjct: 671 KDENLIEAFTNDMDIHTKTAMDVFHVAKDEVTSAMRRQAKAVNFGIVYGISDYGLSQNLG 730 Query: 779 IPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAA 838 I RKEA ++D Y E + GV YME + +AK++GYV TL RR Y+P++ S N R+ Sbjct: 731 ITRKEAGAFIDRYLESFQGVKAYMEDSVQEAKQKGYVTTLMHRRRYIPELTSRNFNIRSF 790 Query: 839 AERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAK 898 AER A+N P+QG+AADIIK+AMI + A L+ +Q + R+++QVHDEL+FE K++++ + K Sbjct: 791 AERTAMNTPIQGSAADIIKKAMIDMAAKLKEKQLKARLLLQVHDELIFEAPKEEIEILEK 850 Query: 899 QIHQLMENCTRLDVPLLVEVGSGENW 924 + ++ME+ LDVPL V+ SG +W Sbjct: 851 LVPEVMEHALALDVPLKVDFASGPSW 876 >UniRef50_C1ZLA6 DNA polymerase I n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZLA6_PLALI Length = 1031 Score = 613 bits (1580), Expect = e-173, Method: Compositional matrix adjust. Identities = 364/955 (38%), Positives = 540/955 (56%), Gaps = 52/955 (5%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 IP+ L+D +++ +HA PP+T+ AG+PT A++G L LI + KPT D Sbjct: 91 IPRERAWLIDVFGVMFQVFHAIPPMTSPAGQPTNAVFGFCRDLLWLIEKQKPTWLICAMD 150 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 + G R+ + YK++R MP+DLR QI L + +A GLP++ G EADDV+ +LA Sbjct: 151 SPGPGIRESWYPEYKANRTEMPEDLRPQIPLLKEVFEAFGLPIIQQDGWEADDVLASLAA 210 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALM 183 + + G V I T DKD QL+TP I + N T ++ ++G+ P+ ++DF L+ Sbjct: 211 QFARHGTDVAIVTNDKDARQLLTPQIQIYNLRKMTWFNEASLLEEWGIRPDQVVDFQGLV 270 Query: 184 GDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN---- 239 GD+ DN+PGVP VG K A ALLQ L+ + A ++ G AKL++N Sbjct: 271 GDAVDNVPGVPLVGPKKAAALLQQFETLEGVLAHADQAPG----------AKLKENLKNF 320 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 E A LS +L + T+++L+ E +P E+L LF++ F++ EA + L Sbjct: 321 AEQARLSQKLVRLNTELQLDFDPEAGRHFRPDVEKLQALFRRLGFRKLVD--EAARVLGQ 378 Query: 300 KGAKPAAKPQETSVAD--------------EAPEVTATVISYD------NYVTILDEETL 339 + A+ Q ++ APE V S + + E L Sbjct: 379 VPSSAASTTQNSATTTPSLNDGNPAENSLFSAPENNTVVPSKPLQRLERTWEMVNTPEGL 438 Query: 340 KAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAI-----EPGVAAYIPVAHDYLDAPD 394 A +L D ET LD + +VG + A +PG A Y+PV L P Sbjct: 439 AALSRQLPLLTQICIDLETTGLDPLRDEIVGWAIAWAAQHGQPGRAVYLPV----LGPPG 494 Query: 395 QISRE--RALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSV 452 + + ++ LKP+LE+ + + QN+K+D + GI I DTM+ Y+L++ Sbjct: 495 SVLLDGTAVVQTLKPILENPQCQLINQNVKFDLLAMRKVGIRPATIGLDTMVGDYLLDAG 554 Query: 453 AGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKM 512 A H+++ L +++L TI ++ G GKNQ T NQI +E YA EDA++ +++ + Sbjct: 555 ARSHNLEVLGQKYLSAATIPISDLLGSGKNQKTMNQIEIERVAEYATEDAELVVRMAPII 614 Query: 513 WPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHE 572 LQ+ G +++ +E PL+PVL+ +E G+K+D L S+EL++ LA L + HE Sbjct: 615 ESQLQE-AGLWKLYDEVEKPLIPVLADMEFKGIKVDVPELERQSQELSITLARLMSEIHE 673 Query: 573 IAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRG 632 +AG EFN+ S QL+ ILFE+ + KKT G PST +EVLE LA +PLP I E+R Sbjct: 674 LAGREFNIDSPMQLRKILFEELKLPVQKKTKTG-PSTDQEVLELLAPLHPLPAKITEHRH 732 Query: 633 LAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQA 692 L KLK TY D LPL+++P++GR+HTS++Q V ATGRLSS+DPNLQNIP+R EG RIR+A Sbjct: 733 LTKLKGTYLDALPLLVHPQSGRIHTSFNQVVAATGRLSSSDPNLQNIPIRTPEGSRIRRA 792 Query: 693 FIAPE-DYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTS 751 F++ + ++ +V ADYSQIELR++AH S+D L++AF G+DIHR AA+V + LE VTS Sbjct: 793 FVSCDPEWRLVCADYSQIELRMLAHFSQDPALVSAFEHGEDIHRLVAAQVHQVALEDVTS 852 Query: 752 EQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKE 811 + RR AKA+NFG++YG S +GL+ L I R+ A ++D YF RY GV +ME + Sbjct: 853 DMRRIAKAVNFGVMYGQSPYGLSAALGISREAATTFIDEYFTRYAGVTTFMENVLDECLA 912 Query: 812 QGYVETLDGRRLYLPDIKS--SNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQA 869 GY T+ GRR + ++ R AER IN +QG+AAD+IK AMI V L+ Sbjct: 913 TGYARTILGRRRPIEGVRGPRERNRNRNMAERTGINTVIQGSAADLIKMAMIRVHHRLER 972 Query: 870 EQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 E ++++Q+HDELV E + + + + M LDVPL V+V G NW Sbjct: 973 ENHPGQLLLQIHDELVLEAPAHLAEELGALVSEEMTKALPLDVPLEVDVAIGTNW 1027 >UniRef50_B1GZ14 DNA polymerase I n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZ14_UNCTG Length = 908 Score = 610 bits (1572), Expect = e-172, Method: Compositional matrix adjust. Identities = 350/921 (38%), Positives = 535/921 (58%), Gaps = 23/921 (2%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 ++DG++Y++RAYHA PPL+ S A+YG + +L + +KP + AV FD K Sbjct: 4 FFIIDGNAYIHRAYHALPPLSTSNNRQVNAVYGFVKLLLKIKNSFKPDYMAVCFDYPSKN 63 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR E+F+ YK++R P+ L +Q+ VKA+ + + + G EADD+I T+ + + Sbjct: 64 FRHEIFKDYKANRKPLDKALISQMPIAREAVKALNVVGIEIKGYEADDLIATVTGNNKGS 123 Query: 129 GRPVLISTGDKDMAQLVTPNITLI-NTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSS 187 G +I TGDKD+ QL LI N + + ++V KYGV P+ + D ALMGD+S Sbjct: 124 GVQTVIVTGDKDILQLAEDETVLIWNYSKDIMYDTKKVEEKYGVAPKQLSDIFALMGDAS 183 Query: 188 DNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSY 247 DNIPG+ G+GEKTA L++ G L+ + + + G M L KE A LS Sbjct: 184 DNIPGIKGIGEKTAVKLIEKFGNLENVLQNADSVKG-------NMGKLLSHGKEQALLSR 236 Query: 248 QLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAK 307 +L + V L+ + E + A + + F+KYEFK A ++ + Sbjct: 237 KLIELNRRVPLDYKLGEFESKDIDAGKAVSFFEKYEFKSLLAKYS----VKEHELQFPVI 292 Query: 308 PQETSVADEAPEVTATVISYDNYVTILDEETLKAWIA-KLEKAPVFAFDTETDSLDNISA 366 ET +EA + + ++ +++ + A +A K+E+A +FA T +LD++ Sbjct: 293 LNETHRNEEAG--SGSFVTDKPVFEVVNSQERAAEVAEKIEQAGIFALKTVRSTLDSLKT 350 Query: 367 NLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRG 426 +VG+S +E A Y P+ H+ L A Q+ E ++ PL +K K+G +LK +R Sbjct: 351 RIVGISLCVE-NKAFYFPIGHNDLTAR-QVIFEDFKDIFAPLFFSDKIKKIGHDLKQERN 408 Query: 427 ILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTF 486 I + G+ L I FD ML SY LN A H + +++ +L T A KG + +F Sbjct: 409 IYSMSGVGLNNIYFDIMLASYCLNP-AKSHCITDMSKEYLDF-TAGVGSYAWKGSKKSSF 466 Query: 487 NQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVK 546 ++E +YA + ++ K++ K K +F + EM LV +LS +E +G+K Sbjct: 467 ANSSIEAGAKYANSISAAVFAIY-KIFDFQIKEKKLSLLFFDTEMSLVEILSEMEISGIK 525 Query: 547 IDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGA 606 +D L N +E++ L +E ++IAG EFN++S KQL +++FEK + +KKT G Sbjct: 526 VDLPFLRNFNEKIVYELKIIENNIYKIAGIEFNINSQKQLSSVMFEKLNLPVIKKTKTGY 585 Query: 607 PSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTAT 666 ST EEVL EL+ + P IL+YR L KLKSTY D L R+HT ++QAVT T Sbjct: 586 -STDEEVLVELS-SHEFPAEILKYRELQKLKSTYIDPLTDYCVYYGSRIHTIFNQAVTTT 643 Query: 667 GRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTA 726 GRLSST+PNLQNIPV++ G+ R+AF+ + + +SADYSQI+LR++AH+S+D + A Sbjct: 644 GRLSSTEPNLQNIPVKSAYGKEFRKAFVPERNKIFISADYSQIDLRVLAHISQDTKFIEA 703 Query: 727 FAEGKDIHRATAAEVFGLPLET-VTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQ 785 F G DIH ATA E+F +P +T R +AK+INFG+IYGMS FGL++QLNIP +A+ Sbjct: 704 FKAGTDIHSATAREIFNIPEGYPLTDSLRSAAKSINFGIIYGMSPFGLSKQLNIPFGKAK 763 Query: 786 KYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAIN 845 +Y+D YFERY V +ME+ QA E GYV T+ GR Y+P+++S+N R A ER A+N Sbjct: 764 EYIDGYFERYDKVKFWMEQIVKQASEDGYVRTITGRIRYIPELRSTNAQVRKAGERMALN 823 Query: 846 APMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLME 905 P+QG++ADIIK AMI+V ++ + + M++QVHD+L+FEV + + + I ME Sbjct: 824 TPVQGSSADIIKIAMISVYNEIKLKGYKSLMLLQVHDDLLFEVPDGESENMISIIKNKME 883 Query: 906 NCTRLDVPLLVEVGSGENWDQ 926 N L +P++V++ +G NW + Sbjct: 884 NPLHLSIPIVVDIKAGRNWGE 904 >UniRef50_C8W0H1 DNA polymerase I n=2 Tax=Clostridia RepID=C8W0H1_DESAS Length = 888 Score = 609 bits (1571), Expect = e-172, Method: Compositional matrix adjust. Identities = 367/929 (39%), Positives = 542/929 (58%), Gaps = 57/929 (6%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 + + N ++++DG+S ++RA+HA P L+ + G PT A+YG NML ++ +P V Sbjct: 6 LTEAKNNTILVIDGNSLIHRAFHAIPLLSTADGLPTNAVYGFTNMLLKILNDIQPKWVTV 65 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 FD TFR++ + YK+HR P++LR Q + ++ A+ + L G EADD+IGT Sbjct: 66 AFDKSKTTFRNQEYSEYKAHRKATPEELRPQFSLVKDVLNALSIKWLEAEGYEADDLIGT 125 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI----LGPEEVVNKYGVPPELI 176 + ++AE+ V+I +GDKD+ QLV+ I T E V K+GV P I Sbjct: 126 IVKKAEEEDADVVILSGDKDILQLVSDKTRAILTKKGITEIEEYNAENVYRKFGVHPNQI 185 Query: 177 IDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKL 236 D+ L GD SDNIPGVPG+G KTA LLQ ++ + A +KI A+T+ + Sbjct: 186 TDYKGLTGDPSDNIPGVPGIGPKTATKLLQDFDSVENILANLDKITS----RARTL---M 238 Query: 237 EQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKW 296 E N E A LS +LATI T+V +++T EQ +P EL + KK EFK+ D+ + Sbjct: 239 ENNSEQALLSKRLATIITNVPVQITLEQCIRTEPNEAELFNILKKLEFKKLLRDMLTAET 298 Query: 297 LQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDT 356 + K + S A E Y+T+ ++E + + + +K+ A Sbjct: 299 GNSNQIKQKHLINKQSYAVE-------------YITLSEQEDFEDLLVQAQKSGKVALAL 345 Query: 357 ETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALK 416 + L+ ++ + G +P L++ + + AL+LL+ + D K K Sbjct: 346 QGRR----EKGLISVALCLSEGQNYLLP-----LNSSTETT-SFALKLLQNICVDSKIKK 395 Query: 417 VGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEI 476 + K D +L YGIE+ FD ML Y+LN G+ SL E L H I +E Sbjct: 396 CCYDTKADLWLLHYYGIEINQPGFDVMLADYLLN--PGK-SARSLPETALSHLDIVLQE- 451 Query: 477 AGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPV 536 ++ L + + D+ L K+ LQ+ + N++ +IE+PL+ V Sbjct: 452 ---------GSETYLPASAEVISRLVDI---LQSKLL--LQEQE---NLYYDIELPLLKV 494 Query: 537 LSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGI 596 L+ +ER GV +D + L SEEL +L L +E AGE FN++STKQL +ILFEK + Sbjct: 495 LASMERTGVSVDKEQLQLMSEELNKKLQVLTTDIYEHAGEIFNINSTKQLGSILFEKLKL 554 Query: 597 KPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVH 656 K KKT G ST VLEELA D+P+ ++LEYR LAKLKSTY D L +INP+TG++H Sbjct: 555 KAGKKTKTGY-STDVTVLEELAGDHPVVSLLLEYRQLAKLKSTYVDGLTGLINPQTGKLH 613 Query: 657 TSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFI-APEDYVIVSADYSQIELRIMA 715 T++HQAVTATGRLSS++PNLQN+P+R + GR+IR+ F+ D I SADYSQIELRI+A Sbjct: 614 TTFHQAVTATGRLSSSEPNLQNVPIRLDAGRKIRKFFVPCKPDNFIFSADYSQIELRILA 673 Query: 716 HLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLAR 775 H+++D L+ AFA+ +DIH TA+EVFG+ ++ VT E R AKA+NFG++YG+S FGLA+ Sbjct: 674 HIAQDNNLMDAFAKKQDIHTRTASEVFGVAMDEVTPEMRGRAKAVNFGIVYGISDFGLAK 733 Query: 776 QLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGAR 835 + + RKEA +Y++ YF RY GV Y++R +A+E+GYV T+ RR YLPD+ SSN Sbjct: 734 DIKVTRKEAGRYINNYFNRYSGVKAYIDRVIREAREKGYVTTILNRRRYLPDLFSSNRVV 793 Query: 836 RAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDA 895 R+ ER A+N P+QG+A+DIIK AM+ + ++ + MI+QVHDEL+F+V +V+ Sbjct: 794 RSFGERTAMNTPIQGSASDIIKLAMVLIYREMRKRKLSSTMILQVHDELIFDVVASEVEE 853 Query: 896 VAKQIHQLMENCTRLDVPLLVEVGSGENW 924 + + MEN L VPL+V++ G NW Sbjct: 854 MQNLVKYYMENAVELSVPLVVDMKIGPNW 882 >UniRef50_A9BEU8 DNA polymerase I n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEU8_PETMO Length = 896 Score = 608 bits (1568), Expect = e-172, Method: Compositional matrix adjust. Identities = 366/930 (39%), Positives = 532/930 (57%), Gaps = 49/930 (5%) Query: 9 LILVDGSSYLYRAYHAFPP-LTNSAGEPTGAMYGVLNMLRSLIMQY-KPTHAAVVF--DA 64 L L+DGS YRA+ A ++ S G PT A+YGV ML L+ +Y K +++F D Sbjct: 4 LYLIDGSGIAYRAFFALGDWMSTSDGLPTNAIYGVARMLLKLLKEYVKKGEDSIIFVMDK 63 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 K T+R EL E YK+ RP P+ QI ++ MV+ +G+ L+A+ EADDVI T+ + Sbjct: 64 KTTTYRHELLESYKAQRPETPEKYIQQIPYIYEMVEKLGIKLVAMDNYEADDVIATIVSK 123 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLI---NTMTNTI-LGPEEVVNKYGVPPELIIDFL 180 ++ V I T DKDM QLV N+ ++ +T + ++V K GVPPE I D L Sbjct: 124 KKRNYDNVYIITSDKDMMQLVKDNVYILRPEQGITEMVKYDAQQVEKKMGVPPEKIADLL 183 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 ALMGDSSDNIPGV G+G KTAQ LLQ +D LY ++I G + KL+ K Sbjct: 184 ALMGDSSDNIPGVKGIGIKTAQKLLQDYDNIDDLYQHLDEIKG-------STKNKLKNEK 236 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEV-QQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 E AYLS +L + D +E E E+ Q L KK +F +++ Sbjct: 237 ETAYLSKKLVQLMVDAPIEEIFEDKEIIYQGFRNNLRDFLKKLDFNSILKELDM------ 290 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 P T VA E + Y + + K + LEK + +FD ET Sbjct: 291 ----PDTTTNSTKVAAETKAEKKDYSTKGKYYE-YNAQDYKELLKILEKYEIISFDLETS 345 Query: 360 SLDNISANLVGLSFAIEP--GVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKV 417 SLD A++VG++ + +P G Y+ D + +I LL ++K + Sbjct: 346 SLDPYQADIVGIALSCKPFEGYFLYLYKEKDRWEITKEIV---------DLLNNKKV--I 394 Query: 418 GQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIA 477 GQNLKYD +L GIEL + FD+M+ +Y+LN + R +MD LA+ +L +KTI ++E+ Sbjct: 395 GQNLKYDITVLKVNGIELSKVHFDSMIAAYLLNPDSRRFNMDDLAKEYLDYKTIKYKEVM 454 Query: 478 GKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVL 537 GK LT I + YA EDAD+ +L + P L++ + + IEM + VL Sbjct: 455 GKDIKLLTLGDIDKKRVVEYAGEDADIAYRLFEVLKPKLEEFELFELFEK-IEMSTINVL 513 Query: 538 SRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIK 597 S +E NGV D K L EE +L+ L + +I G +FN +S KQ+ +LFE G+K Sbjct: 514 SEMEMNGVYFDLKELQKLEEEYNKKLSSLMYEMKKIVGYDFNPNSPKQVGELLFENLGLK 573 Query: 598 PLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHT 657 +KT G+ ST + LE L ++P+ + +LEYR KL STY +P ++N KTGRVHT Sbjct: 574 GKRKTKSGSYSTDADSLEALRDEHPIIEKLLEYRKYQKLLSTYIIAIPKLVNKKTGRVHT 633 Query: 658 SYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIELRIMAH 716 S++Q TATGRLSS++PNLQN+P+R E+G RIR A +DYV++SADYSQIELR++AH Sbjct: 634 SFNQTGTATGRLSSSEPNLQNLPIREEDGERIRSTVKAQKDDYVLLSADYSQIELRVLAH 693 Query: 717 LSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQ 776 L+ D+ L+ AF G+DIH TAA +FG+ ++ V RR K +NF L+YG S +GLA Sbjct: 694 LTNDETLINAFNNGEDIHALTAAAIFGVKIDDVDYNMRRVGKVVNFSLVYGSSPYGLAEN 753 Query: 777 LNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARR 836 L IP ++A+ +M+ YF+ Y V EY E + A ++GYVET+ GR+ +L +IK+ + Sbjct: 754 LKIPVEDAKDFMNRYFKTYQKVKEYQESSLKIATQKGYVETIFGRKRFLKNIKTG----K 809 Query: 837 AAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAV 896 + +R IN P+QG+AADI+K AMI + L E ++I+QVHDE+V E+ + V+ Sbjct: 810 SELKRIVINTPIQGSAADIMKLAMINLYKKLPKE---AKLILQVHDEVVIELPEKIVEET 866 Query: 897 AKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 K + MEN +L++PL V++ G+NW + Sbjct: 867 KKMVQDCMENAVKLNIPLKVDISVGKNWQK 896 >UniRef50_Q02DA6 DNA polymerase I n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02DA6_SOLUE Length = 865 Score = 607 bits (1565), Expect = e-172, Method: Compositional matrix adjust. Identities = 365/938 (38%), Positives = 535/938 (57%), Gaps = 86/938 (9%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHA-----FPPLTNSAGEPTGAMYGVLNMLRSLIMQYKP 55 M + + L L+D +++RAYHA PP+ S G T A+Y NMLR L Q+ P Sbjct: 2 MGAVARQKLFLIDTFGFIFRAYHARARTGAPPMRTSTGFSTEAVYIFNNMLRKLSKQHDP 61 Query: 56 THAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115 + A +F++ T R + F YK++R P DL QI + +++AM +P+L G EAD Sbjct: 62 PYVAAIFESGEATHRVQEFAEYKANRTETPPDLLDQIPFVRRVLEAMRIPILEYPGFEAD 121 Query: 116 DVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLIN-TMTNTILGPEEVVNKYGVPPE 174 DVIGT+ R AE G V+I + DKDM QLVT +++++N + + PEEV GVPP Sbjct: 122 DVIGTITRRAEAEGLDVVIVSSDKDMLQLVTEHVSMLNPAKDDKLYNPEEVKTFMGVPPV 181 Query: 175 LIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAA 234 + D LALMGDS DNIPG PG+G+K A+ +L+ G ++ ++ +R Sbjct: 182 QVADLLALMGDSVDNIPGAPGIGDKGAKQILEKFGSIEAALERAAEVERKVYR------E 235 Query: 235 KLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAG 294 L+ N + +S +LATI TDV +E T + ++ Q P L ++K+ EF Sbjct: 236 SLQNNVDRIRMSKRLATISTDVPIEFTLDAVKAQAPDPGLLKAIYKEMEFH--------- 286 Query: 295 KWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAF 354 L+ G + + SV A E L+ W+A PV Sbjct: 287 SLLKELGPSEDTRERRYSVIGSAGE-------------------LREWLAGAAGTPVAVA 327 Query: 355 DTETD----SLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLE 410 T++ +LD I+A+ +GL A + G A ++ E +EL KP LE Sbjct: 328 ITKSTEGEFALDMIAADTIGL--ARKRGEAC-------------AVTSELIVEL-KPWLE 371 Query: 411 DEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKT 470 D +KV ++K LA GIE RG D M+ ++L++ G +++ A R L K Sbjct: 372 DAAVVKVACDVKSAVLQLARLGIEARGFGHDVMIYGFLLDADPGGCGLENQAHRRLDLKL 431 Query: 471 ITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIE 530 G A + AD+TL+L+ ++ P + +G +++ IE Sbjct: 432 ------------------------GGAAEQHADITLELYEQLAPAIDG-RGLRKLYDEIE 466 Query: 531 MPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTIL 590 +PL VL+R+ER G++ID L S + +++ L + H +AG+ FN+SS +QL +L Sbjct: 467 LPLTRVLARMERTGIRIDGAELKRLSVLMESQISGLTAEIHALAGKPFNISSPQQLGKVL 526 Query: 591 FEKQGI-KPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMIN 649 FE + P+K G ST+ +VL+ELA ++ + + +LEYR L KLK TY D LP +I+ Sbjct: 527 FEDLNLPAPVKYGKGKTISTAADVLDELAAEHEIVRKVLEYRQLTKLKGTYVDALPALID 586 Query: 650 PKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQI 709 P TGR+HTS++Q ATGRLSS++PNLQNIP+R GR IR AF+ + + ++ ADYSQI Sbjct: 587 PATGRLHTSFNQTGAATGRLSSSNPNLQNIPIRTSLGREIRAAFVPRDGWKLLVADYSQI 646 Query: 710 ELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMS 769 ELR++AH+S D+ L+ AF EG+DIH TAAEV G+P VT E RR AKA+NFG++YG+S Sbjct: 647 ELRLLAHMSGDELLVQAFREGEDIHTRTAAEVMGVPPLMVTPEARRDAKAVNFGIVYGIS 706 Query: 770 AFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIK 829 AFGLA QL I R EA++Y+ YF RY GV ++E T A+ ++ G +TL GR +P+I Sbjct: 707 AFGLAAQLGIGRAEAERYIKNYFARYVGVKRFIEETIAEVRKTGVTKTLFGRERPIPEIN 766 Query: 830 SSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVH 889 N R AER A+N+P+QGTAAD+IK AM+ +DA L A + M++QVHDELVFE Sbjct: 767 GRNPNARGFAERTAVNSPLQGTAADLIKLAMVRIDAALAAGGFQAAMLLQVHDELVFECP 826 Query: 890 KDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 +++D V++ + + ME L VPL+V+VGSG+NW A Sbjct: 827 PEELDEVSRMVKREMEGACELKVPLVVDVGSGDNWRDA 864 >UniRef50_B8D217 DNA polymerase I n=1 Tax=Halothermothrix orenii H 168 RepID=B8D217_HALOH Length = 870 Score = 603 bits (1556), Expect = e-171, Method: Compositional matrix adjust. Identities = 370/936 (39%), Positives = 539/936 (57%), Gaps = 93/936 (9%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 + L L+DG S +RA++A P L+ S GE T A++G ML L+ + KP AV FD K Sbjct: 2 KKKLYLLDGQSLAHRAFYALPLLSTSRGEYTNAVFGFTRMLLKLLDEEKPDLIAVAFDKK 61 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 TFR + ++ YK+HR MP++L+ Q+ + ++K+ +P++ + G EADD+IGT+AR+ Sbjct: 62 APTFRHKEYKEYKAHRKKMPEELKPQLSLIKEVLKSFSIPIIEIEGFEADDIIGTMARKG 121 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINT---MTNTI-LGPEEVVNKYGVPPELIIDFLA 181 E+ G V+I TGD+D QLVT +++++ T +++ + +V +Y + P+ +ID Sbjct: 122 EEEGFEVVIVTGDRDALQLVTEDVSVMYTKRGISDIVRYDLNKVRERYELEPQQLIDMKG 181 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGDSSDNIPGVPG+GEKTA LL+ L+ + +K++G K L++ + Sbjct: 182 LMGDSSDNIPGVPGIGEKTAIKLLKEFSSLEEILDNIDKVSG------KKRKENLQKYAD 235 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYE-------FKRWTA---DV 291 A LS +L IK DV L++ ++ + + + + LF++ E FK T+ D Sbjct: 236 QARLSKRLGEIKVDVPLDVELDECHLGKFHKKNIRELFERLEFASLLNRFKEKTSISIDD 295 Query: 292 EAGKWLQAKGAKPAAKPQETSVADEAPEV--TATVISYDNYVTILDEETLKAWIAKLEKA 349 + K L KG + ++ D+A + + +NY T Sbjct: 296 ISVKELDRKGLE--------NICDKARNLGKLGLTLRLNNYTT----------------- 330 Query: 350 PVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLL 409 PV A + S ++ L E + + + A+ +LKP+L Sbjct: 331 PVRA---------HASQGIISLG---EGNLYIFTDINE-------------AISILKPIL 365 Query: 410 EDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHK 469 D K N K L + IEL G+ FD +L Y+L + L ++ L Sbjct: 366 TDISVKKYILNSKECTVFLKKHDIELEGLVFDPLLAYYLLKPSGKLPGLRDLLDQEL--- 422 Query: 470 TITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENI 529 +++ E + L F D +L M P L+ + + +F +I Sbjct: 423 SLSLPEDIKEDNLYLVF---------------MDNIFKLAEGMVPKLEDME-LIELFNDI 466 Query: 530 EMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTI 589 E+PL+ VL+ +E NG+K+D + L + S + L LE K HE+AGE+FN++S KQL I Sbjct: 467 EIPLITVLAELEYNGIKVDAEYLESLSRKWEEELNGLESKIHELAGEKFNINSPKQLGGI 526 Query: 590 LFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMIN 649 LFEK G+ +KKT G ST +VLE+L +P+ +I EYR L KLKSTY D LP MIN Sbjct: 527 LFEKLGLPVIKKTKTGY-STGAKVLEKLEDKHPIIPLISEYRQLMKLKSTYVDALPPMIN 585 Query: 650 PKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQ 708 P TGR+HTS++Q VTATGRLSST+PNLQNIPVR +EGR IR+AFI ED+V+++ADYSQ Sbjct: 586 PDTGRLHTSFNQMVTATGRLSSTEPNLQNIPVRTDEGREIRRAFITENEDWVLLAADYSQ 645 Query: 709 IELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGM 768 IELR++AH+S D+GL AF G+DIH TA+EVF + + VT RR AK INFG+ YGM Sbjct: 646 IELRVLAHISDDEGLKAAFNTGQDIHTQTASEVFEVEPDEVTPNMRRHAKVINFGIAYGM 705 Query: 769 SAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDI 828 S +GLAR L I R+EA Y++ YFER+ GV +YMER +AK +GYV T+ RR Y+P+I Sbjct: 706 SPYGLARDLGISRQEASDYINKYFERFTGVKDYMERVVTEAKTKGYVTTIFNRRRYIPEI 765 Query: 829 KSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEV 888 S N RR+ AER AIN P+QGTAADI+K AMI V L+ R+++QVHDEL+ EV Sbjct: 766 NSRNYHRRSFAERTAINTPIQGTAADIMKLAMIKVYNRLKENGSPARILLQVHDELILEV 825 Query: 889 HKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 ++D+ +A+ + ME + VPL+V + SG NW Sbjct: 826 PREDLTEMARIVKSEMEKAVDMKVPLVVNLESGPNW 861 >UniRef50_C9RNE9 DNA polymerase I n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RNE9_FIBSS Length = 972 Score = 603 bits (1555), Expect = e-171, Method: Compositional matrix adjust. Identities = 376/989 (38%), Positives = 555/989 (56%), Gaps = 81/989 (8%) Query: 4 IPQNPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 + + L+L+D + +R ++A+ PL NS GE M+G + ++ ++KPTH A+ Sbjct: 1 MAEKTLLLLDSFALAFRMFYAYSQNPLVNSKGEDVSMMHGYWGAVLRILAKHKPTHFAIA 60 Query: 62 FD-AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 D A KTFR EL+ YK++R PMP+++ AQ+ L ++A G+PLL+ G EADDV+ + Sbjct: 61 RDVAHTKTFRHELYPDYKANRGPMPEEMAAQMPLLCESMEASGIPLLSEPGYEADDVMAS 120 Query: 121 LAREAEKAG-RPVLISTGDKDMAQLVTPNITLINT---MTNTILGPEEVVNKYGVPPELI 176 A A AG V+I + DKDM+Q+VT I L + GP++V+ KYG+PPE I Sbjct: 121 AAEAAVNAGFDHVVIISKDKDMSQIVTDKIHLFHLEKGADGIDFGPQQVLEKYGIPPEKI 180 Query: 177 IDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKL 236 D+LALMGDSSDN+PGVP VG KTA LL G +D +YA + I K + L Sbjct: 181 RDYLALMGDSSDNVPGVPKVGPKTAIQLLTEYGDMDNIYANLDNIK------KKGLHDNL 234 Query: 237 EQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVE---- 292 NKE A+LS +L T++T + LE ++ L G+F+++E +E Sbjct: 235 ANNKEQAFLSRELVTLQTKRAYHGNLDALEFCGLHSDTLEGIFREHEINSLIRLLENVPS 294 Query: 293 -AGKWLQAKGAKPAAKPQETSVADEAP------EVTATVISYD---NYVTILDEETLKAW 342 G + AA + +D+A +V D Y+ + ++E + Sbjct: 295 KTGFVRKDDSDDSAAGSESNGTSDDASGDSSNSKVVKASFPADLPPTYICVDNDEVFEQM 354 Query: 343 IAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAA-----YIPVAH---------- 387 + ++A DTETD LD + N+VGL A + YIP+ H Sbjct: 355 KKEFDEATEIGIDTETDGLDPMQCNIVGLCLAAAAKDGSVPKGYYIPLGHTDDIGFPYPA 414 Query: 388 --------------------DYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGI 427 D P IS + + + K V N K+D + Sbjct: 415 GKGGNFDFNATKKWFIDFWNDSCTLPGDISDSGSKQP-----DSAKRSLVFHNAKFDLHV 469 Query: 428 LA-NYGIELRGI----AFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 LA +G+ + I DT++ +++L+ +D+ + L+H+ I E + G+GK Sbjct: 470 LARTFGLTQKQIDSANIIDTLIAAWMLSPGQTGLGLDNQVMQLLQHEMIPIENLIGRGKK 529 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 Q+TFN+ +++A Y AEDA TL+L + LQK+ F EMPL+ VL ++E Sbjct: 530 QITFNRTPIKDATEYGAEDAVYTLRLWAPLRAKLQKYDYEKYFFSQ-EMPLLKVLYQMEG 588 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 G +D K+L +L R+ +LEK+ ++AG EFN+ S KQL +LF+ G+ +KK Sbjct: 589 VGAFVDTKILKKLQTDLEHRIEKLEKEICDMAGCEFNIGSPKQLGEVLFDTLGLPEIKKR 648 Query: 603 PGGAPSTSEEVLEELALD--YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 ST VLEEL+ +P+ ++EYR L K++STY LP ++NP T R+HTS+ Sbjct: 649 -----STDAAVLEELSFRSAHPIVFAVIEYRELKKMQSTYVSVLPTLVNPDTKRIHTSFI 703 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE-DYVIVSADYSQIELRIMAHLSR 719 Q TATGRLSS DPNLQNIPVR++ G++IR AF+ + VI++ DYSQIELR++AHLS Sbjct: 704 QWGTATGRLSSRDPNLQNIPVRSDLGKQIRAAFVPQNPNNVILAVDYSQIELRMLAHLSG 763 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 D+ L+ ++ EG DIH TAA + + LE VT++ RR AK +NFG++YGM+AF L+R L I Sbjct: 764 DEALIESYKEGIDIHARTAAAINRVSLEDVTADMRRDAKVVNFGVLYGMTAFRLSRDLKI 823 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 P +A+ ++D YFE Y GV ++++ T+A A GYVETL GRR Y+ I SS+ A Sbjct: 824 PMAQAKSFIDGYFEMYQGVQKFIDDTKAAAHRDGYVETLSGRRRYIAGIDSSDRMESQMA 883 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 ER A+N P+QG+AAD+IK AMI + + E +RM++QVHDELVFE KD V+A++ Sbjct: 884 ERMAVNTPVQGSAADLIKIAMIRIQKRINDENLPLRMMLQVHDELVFECPKDQVEALSAM 943 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWDQAH 928 + ME L VPL+ VG G+NW +AH Sbjct: 944 VKSEMEGAMELKVPLVASVGFGKNWLEAH 972 >UniRef50_Q2RHE8 DNA polymerase I n=4 Tax=Clostridia RepID=Q2RHE8_MOOTA Length = 885 Score = 603 bits (1554), Expect = e-170, Method: Compositional matrix adjust. Identities = 381/922 (41%), Positives = 525/922 (56%), Gaps = 58/922 (6%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 L+LVDG+S ++RA+HA PPL G T A+YG ML+ +KP + V FD T Sbjct: 8 LLLVDGNSVIHRAFHALPPLQTREGIRTNAVYGFATMLQKAREMFKPDYIIVAFDHSKVT 67 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR+EL++ YK RP +LR Q + ++ A L V G EADD+IGTL+R+ Sbjct: 68 FRNELYDEYKGTRPETDPELRPQFALVKRLLAAWNLASCEVEGYEADDLIGTLSRQGAAT 127 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPELIIDFLALMG 184 G VLI TGD+D QLV + ++ ++ E + YG+ PE +ID ALMG Sbjct: 128 GLEVLILTGDRDALQLVGERVKVLLMRRGLSQVEVIDREAIKKNYGLEPEQLIDVKALMG 187 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 D+SDNIPGVPGVGEKTA L++ G L+ + A +I G + +A L + A Sbjct: 188 DASDNIPGVPGVGEKTAVQLVRQYGDLEGVLAHSGEIKG------RRVAENLVTFADQAR 241 Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304 L+ +LATI + L Q P E +L L+K+ EF DV + ++ +G K Sbjct: 242 LARRLATIDCQAPVTLDLAGCCNQSPDYEAVLALYKELEFHSLVKDVL--RAMEQEGKKA 299 Query: 305 AAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNI 364 + QET+ +S + +T+ E L +A+L A + ++ + Sbjct: 300 S---QETTAVRG--------LSLPDPLTLDSLEELAELVARLVGKTDVALELILNNPSYL 348 Query: 365 SANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYD 424 A V + A E GVA + ++ L + P+ D K V Sbjct: 349 EAAAVAVGLAWEDGVAV---LGTAGIEPAALAGTLEPLLRVNPIFHDAKRALV------- 398 Query: 425 RGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQL 484 +N G + DTM+ Y+LN A RHD L E L+H + E QL Sbjct: 399 --WFSNAGAGVADPGGDTMVAGYLLNPSASRHD---LPELCLEHLNLALVE---GDSPQL 450 Query: 485 TFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNG 544 AA A V LH ++ LQ G N++ +E+PL VL +E G Sbjct: 451 A------------AARRAAVIRLLHRELASKLQV-AGMENLYRRVELPLTRVLGAMESYG 497 Query: 545 VKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPG 604 V ++ + L EL LA L + +E+AGEEFNL+S KQL ILFEK G+ P+K+T Sbjct: 498 VAVNMETLDLMGIELEGGLAALTEAIYELAGEEFNLNSPKQLAVILFEKLGLPPVKRTKT 557 Query: 605 GAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVT 664 G ST VLEELA +P+ ++EYR LAKLKSTY D L ++NP+TG +HTS++Q VT Sbjct: 558 GF-STDAAVLEELACRHPIAAKLVEYRQLAKLKSTYVDGLKPLVNPRTGSLHTSFNQTVT 616 Query: 665 ATGRLSSTDPNLQNIPVRNEEGRRIRQAFI--APEDYVIVSADYSQIELRIMAHLSRDKG 722 ATGRLSS++PNLQNIPVR E GRR+R+AF+ P ++++ADYSQIELRI+AH+S D+ Sbjct: 617 ATGRLSSSEPNLQNIPVRLELGRRLRKAFVPHGP-GRLLLAADYSQIELRILAHISGDEA 675 Query: 723 LLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRK 782 ++ AF G+DIH TAAEVFG+PL VT RRSAKA+NFG++YG+S +GL+R L I R Sbjct: 676 MIAAFRRGEDIHARTAAEVFGVPLGEVTPAMRRSAKAVNFGIVYGISDYGLSRDLGISRS 735 Query: 783 EAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERA 842 EA Y++ YF RY GV Y+E A+A+++GYV TL GRR YLPD+ SSN R+ ER Sbjct: 736 EAHDYIERYFRRYRGVKAYLEEIVARARQEGYVTTLLGRRRYLPDLFSSNRNVRSFGERT 795 Query: 843 AINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQ 902 A+N P+QGTAADIIK AM+ + L+A+ P RMI+QVHDEL+F+V DD+ AVA + Sbjct: 796 AMNTPIQGTAADIIKMAMVKIFRLLEAQYPAARMILQVHDELIFDVPDDDLPAVAGLVKD 855 Query: 903 LMENCTRLDVPLLVEVGSGENW 924 ME+ L VPL V++ +G NW Sbjct: 856 TMEHTLELQVPLQVDLKAGPNW 877 >UniRef50_B0KAJ0 DNA polymerase I n=12 Tax=Thermoanaerobacterales RepID=B0KAJ0_THEP3 Length = 872 Score = 597 bits (1540), Expect = e-169, Method: Compositional matrix adjust. Identities = 364/925 (39%), Positives = 538/925 (58%), Gaps = 69/925 (7%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 +++DGSS +YRAY+A P LT S G T A+YG ML LI + KP + A+ FD K T Sbjct: 4 FLVIDGSSLMYRAYYALPMLTTSEGLHTNALYGFTMMLIKLIEEEKPDYIAIAFDKKAPT 63 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR + ++ YK+ R MP++L Q++ L +++ + +L + G EADD+IGT+++ AE+ Sbjct: 64 FRHKEYQDYKATRQAMPEELAEQVDLLKEIIEGFNIKILELEGYEADDIIGTISKLAEEK 123 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEE-----VVNKYGVPPELIIDFLALM 183 VL+ TGD+D QLV+ + + I EE V+ +Y + P ID LM Sbjct: 124 EMEVLVVTGDRDALQLVSDKVK-VKISKKGITQMEEFDEKAVLERYEITPHQFIDLKGLM 182 Query: 184 GDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVA 243 GD SDNIPG+P +GEKTA LL+ G ++ L ++ G + +E NKE+A Sbjct: 183 GDKSDNIPGIPNIGEKTAIKLLKDFGTIENLLQNLSQLKG-------KIKENIENNKELA 235 Query: 244 YLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAK 303 +S +LATIK D+ +E+ E+ V+ E+LL LF K EF Sbjct: 236 IMSKKLATIKRDIPIEIDFEEYRVKDFNEEKLLELFNKLEF------------------- 276 Query: 304 PAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDN 363 S+ D I N V I++ ++ W +K++ + A ++ S+ Sbjct: 277 -------FSLIDS--------IKKKNNVEIVNNHKVQKW-SKVDIKKLIALLQDSKSI-- 318 Query: 364 ISANLVGLSFAIEPGVAAYIPVAHD--YLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 L + E A+ +D Y+D ++ LK + E EK + Sbjct: 319 ---AFYPLIYEGEIKKIAF-SFGNDTVYIDG-------FQIKDLKEIFEKEKFEFTTHEI 367 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 K L+ GIE + DT + +Y+LN +D+D + +++LK ++EE+ GKG+ Sbjct: 368 KDFLVKLSYKGIECKSKYMDTAIMAYLLNPSESNYDLDRVLKKYLKVDVPSYEEVFGKGR 427 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 ++ +I + Y L K+ +++ + E IEMPLV VL +E Sbjct: 428 DKKKLEEIGEDILADYICSRCVHLFDLREKLMNFIEEMDMKRLLLE-IEMPLVEVLKSME 486 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 +G +D +VL S+++ R+AE+ K ++ AG +FN++S KQL LFEK + +KK Sbjct: 487 VSGFTLDKEVLKELSQKINDRIAEILDKIYKEAGYQFNVNSPKQLSEFLFEKLNLPVIKK 546 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDK-LPLMINPKTGRVHTSYH 660 T G ST EVLE+L + I+EYR L KLKSTY + LPLM + RVH+++ Sbjct: 547 TKTGY-STDSEVLEQLVPYNNIVNDIIEYRQLTKLKSTYINGFLPLM--DENNRVHSNFK 603 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFI-APEDYVIVSADYSQIELRIMAHLSR 719 Q VT+TGR+SST+PNLQNIP+R E GR+IR+AFI +D IVSADYSQIELR++AH+S Sbjct: 604 QMVTSTGRISSTEPNLQNIPIREEFGRQIRRAFIPRTKDGYIVSADYSQIELRVLAHVSG 663 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 D+ L+ +F +DIH TA+EVF +P+E VT E RR+AKA+NFG+IYG+S +GL+R L I Sbjct: 664 DEKLIESFMNNEDIHLRTASEVFKVPMEKVTPEMRRAAKAVNFGIIYGISDYGLSRDLKI 723 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 RKEA++Y++ YFERY GV EY+E+ AKE GYV T+ RR Y+P+I S N +R+ A Sbjct: 724 SRKEAKEYINNYFERYKGVKEYIEKIVRFAKENGYVITIMNRRRYIPEINSRNFTQRSQA 783 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 ER A+NAP+QG+AADIIK AM+ V L+ + + ++I+QVHDELV + +KD+V+ V K Sbjct: 784 ERLAMNAPIQGSAADIIKMAMVRVYNDLEKLKLKSKLILQVHDELVVDTYKDEVEIVKKI 843 Query: 900 IHQLMENCTRLDVPLLVEVGSGENW 924 + MEN +L VPL+VE+G G NW Sbjct: 844 LKDNMENVVQLKVPLVVEIGVGPNW 868 >UniRef50_D1BM52 DNA polymerase I n=6 Tax=Veillonellaceae RepID=D1BM52_VEIPT Length = 873 Score = 597 bits (1539), Expect = e-169, Method: Compositional matrix adjust. Identities = 373/934 (39%), Positives = 527/934 (56%), Gaps = 86/934 (9%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 L+++DGSS L+RA+ A PPL ++ G PT A+YG L ML L + P + AV FD +T Sbjct: 4 LMIIDGSSLLFRAFFALPPLKSALGTPTNAVYGFLTMLIKLYEEINPDYIAVAFDKGRQT 63 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR E++ YK +RP P+DLR Q + ++KA+G+ ++ G E DD++G+L+++ Sbjct: 64 FRTEMYSEYKGNRPDAPEDLRPQFSLIQDVLKALGICVIEEEGFEGDDILGSLSKKFGAP 123 Query: 129 GRPVLISTGDKDMAQLVTPNITL------INTMTNTILGPEEVVNKYGVPPELIIDFLAL 182 V I TGD+D QLVT + + I+ M L E + YG P+ +I+ AL Sbjct: 124 EMAVQIITGDRDNLQLVTEHSHVFLTKKGISDMLEVTLDNMEEL--YGYGPDKVIEMKAL 181 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 MGDSSDNIPGVPGVGEKTA L+ G L+++Y E I+G K + +L +NKE+ Sbjct: 182 MGDSSDNIPGVPGVGEKTALKLITEYGNLESVYEHIEDISG------KKLKERLVENKEL 235 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A+LS +LATIKTD+EL E VQ E+ LF+ F + T + +Q G Sbjct: 236 AFLSRELATIKTDMELSYKVEDF-VQNFHTSEVQPLFETLGFTKLTP-----RIVQVMGG 289 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 + AA S+ E IS D+ + D + L A K + V Sbjct: 290 EEAAFGDPGSLFAPQEE-----ISLDD---LADAKVLTADFYKDKTVAVHV--------- 332 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 I G + V + YL D I + + + +L+ KA+ Q + Sbjct: 333 ------------ILDGKTPFRTVTNTYLSNGDTIVKTDDTKAVLAVLQGAKAIVTTQTKE 380 Query: 423 YDRGILANYGIELR-------GIAFDTMLESYILNSVAGRHDMDSLAERW----LKHKTI 471 A+ E+ D L +Y+L+ + L ER+ + ++ Sbjct: 381 IIEAFGADVPAEISLFNADKTARVHDMSLIAYLLDPTRTNYGYLYLTERFSVPSIASGSV 440 Query: 472 TFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEM 531 E ++ K L N+ A E A R ++W +++E IE+ Sbjct: 441 DVECVS-MVKALLAMNEAACESARRE-------------ELW----------SLYETIEL 476 Query: 532 PLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILF 591 PL+ L +E+NG+ ID + L + LA+++++ +E+AGE FN++S KQL ILF Sbjct: 477 PLIHTLVVMEKNGIYIDTEKLAETTTRFKEELAQVQQEIYELAGENFNINSPKQLGVILF 536 Query: 592 EKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPK 651 EK + +KKT G ST EVL+ L + P+ + IL YR +AKL STY + L ++IN K Sbjct: 537 EKMNLPIIKKTKTGY-STDAEVLDMLRHESPIVEKILAYRSVAKLVSTYCEGLAVLINDK 595 Query: 652 TGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY-VIVSADYSQIE 710 T R+HT+++Q VTATGRLSS+DPNLQNIPVR E+GR IR F Y +VSADYSQIE Sbjct: 596 TRRIHTTFNQMVTATGRLSSSDPNLQNIPVRTEKGREIRALFYPGAGYDTLVSADYSQIE 655 Query: 711 LRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSA 770 LRI+AHLS D+ L+ AF EGKDIHR TAAEV G + VTSE+R AKAINFG+IYG+S Sbjct: 656 LRILAHLSGDEALIKAFVEGKDIHRFTAAEVLGKAQDDVTSEERSHAKAINFGIIYGISD 715 Query: 771 FGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKS 830 FGL+R L I R EA+ Y+DLYF RYP V EYM+R +A E G V T+ GR+ LPDI S Sbjct: 716 FGLSRDLGITRGEAKNYIDLYFSRYPKVKEYMDRMVQEAHETGKVRTMFGRQRELPDINS 775 Query: 831 SNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHK 890 N RR+ AER A+N P+QGTAADIIK AM ++ L+ + + R+++QVHDELV EV Sbjct: 776 RNFNRRSFAERTAMNTPIQGTAADIIKLAMNQMEQKLEEQNFKSRLLLQVHDELVLEVVN 835 Query: 891 DDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 +++A+ + + M++ L VPL+V+V ENW Sbjct: 836 SELEAIEELLRNTMQSVVELQVPLIVDVHHAENW 869 >UniRef50_C7MNN5 DNA polymerase I n=2 Tax=Coriobacteriaceae RepID=C7MNN5_CRYCD Length = 885 Score = 592 bits (1526), Expect = e-167, Method: Compositional matrix adjust. Identities = 369/940 (39%), Positives = 519/940 (55%), Gaps = 79/940 (8%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSA-GEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 + ++DG+S ++RAYHA PP N+ G PT A++G L+M I P FD Sbjct: 5 IAVIDGNSLMHRAYHAVPPTMNAPDGTPTNAVFGFLSMFLKFIDIAHPDAVVCAFDVGKP 64 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 R E YK+ RPPM DDLR Q + ++ AMG+P + V G E DD++GT+A + Sbjct: 65 QHRIAALEQYKAQRPPMDDDLRVQFPVVEQVLAAMGIPAVKVPGWEGDDILGTIAARGDA 124 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLALM 183 AG L+ TGDKD QL + + ++NT I P V KYGV PE I DFL LM Sbjct: 125 AGYDTLLVTGDKDACQLASDHTRIVNTKRGISDVVIFDPAGVEEKYGVSPEQIPDFLGLM 184 Query: 184 GDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVA 243 GDSSDNIPGVPG+G KTA LLQ G ++ +Y +++ G + N++ A Sbjct: 185 GDSSDNIPGVPGIGPKTAAKLLQRFGSIEGIYEHLDELKG-------KQQESIRDNRDAA 237 Query: 244 YLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK-GA 302 +LS +A IK D++ EL E L E + F+K + V + +A G Sbjct: 238 FLSRDVAIIKCDLDFELDLENLTFPSFNEEAVTAAFEKLGMRAHLGRVLSLIGEEAPVGH 297 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYV------------TILDEETLKAWIAKLEKAP 350 A K Q+ + DEA + A V+ D+ V TI D+E L KL Sbjct: 298 VVALKWQDYTRNDEAYNLIAQVL--DDSVECTGAERIGMAFTISDQENLFESGLKL---- 351 Query: 351 VFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLE 410 A DT ++ A + L FA+ + I V LDA + AL+ + P Sbjct: 352 AVACDTGCALIEGDRARAL-LGFAVGRSSSLRIAV----LDA------KEALQCVYPPDT 400 Query: 411 DEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKT 470 E+ +L N+ FD L +Y+L+S R+D LAE +L+ Sbjct: 401 AEEIHIAEADL-----FAMNF--------FDVTLAAYVLDSSVSRYDFSYLAETYLEGAL 447 Query: 471 ITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIE 530 E+ + Q + ++ + D G V++ I+ Sbjct: 448 APVEDDDDRLVMQAACLRALIDPMSQALVAD-------------------GTKGVYDTID 488 Query: 531 MPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTIL 590 +PLVPVL+ +ER G +D L +A++ ++ +E+AGE+FN+ S +Q+ IL Sbjct: 489 LPLVPVLAHMERIGALLDTDTLQALGSRTAQNIADISERIYELAGEKFNIDSPQQVSHIL 548 Query: 591 FEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINP 650 F+ G+ P K+T G ST +VLE+L+ ++ LP +ILEYR LAK+ TY D LP + Sbjct: 549 FDVIGLPPRKRTSRGY-STDAKVLEDLSSEHQLPGLILEYRELAKIMGTYIDALP-KLRG 606 Query: 651 KTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFI--APEDYVIVSADYSQ 708 GR+HTS+++ VT TGRLSS++PNLQNIPVR E GR IR+ FI +PE ++ VSADYSQ Sbjct: 607 ADGRLHTSFNETVTTTGRLSSSNPNLQNIPVRTEFGRHIRECFIPLSPE-HLFVSADYSQ 665 Query: 709 IELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGM 768 IELR++AHLS D L+ AF G D H ATAA VFG+P+E VT E R AKA+NFG++YG Sbjct: 666 IELRLLAHLSGDAHLIDAFRSGADFHSATAARVFGVPVEEVTPELRSRAKAVNFGIVYGQ 725 Query: 769 SAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDI 828 AFGL++ L IP EAQ +D YF YP V Y++ AQA E+GY T+ GR+ ++P++ Sbjct: 726 QAFGLSQSLRIPFGEAQAMIDRYFTAYPVVRAYLDNIVAQAHEKGYALTMFGRKRHIPEL 785 Query: 829 KSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEV 888 ++ N +RA ER A+N PMQGTAADIIK+AM+ VDA L+ E P +M++QVHDEL V Sbjct: 786 RAHNAQQRAFGERIAMNHPMQGTAADIIKKAMVEVDARLRHEFPNAKMMIQVHDELDLSV 845 Query: 889 HKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 D V V+ + ++MEN LDVPL+V+V S +NW +AH Sbjct: 846 PADQVGEVSALLKEVMENVVELDVPLIVDVQSAKNWAEAH 885 >UniRef50_Q1D7R1 DNA polymerase I n=4 Tax=Myxococcaceae RepID=Q1D7R1_MYXXD Length = 908 Score = 591 bits (1524), Expect = e-167, Method: Compositional matrix adjust. Identities = 363/922 (39%), Positives = 526/922 (57%), Gaps = 28/922 (3%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 L+L+D S +++RAYHA PPLT S G T A+ G M+ + + KPTH A+ FD + +T Sbjct: 13 LVLIDASGFIFRAYHAIPPLTTSKGVQTNAVLGFTRMVLKALRELKPTHVALAFDKESRT 72 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 R ++ YK++R P+DL Q + +V+A+ +P+L V+G EADDVIGTLA +A++ Sbjct: 73 ERQKIDPTYKANREGPPEDLVPQFALIRRVVEAINVPVLEVAGWEADDVIGTLAVKAKQE 132 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSD 188 G V + TGDKD Q+V ++ L + M + P +V + G+ P + D+LAL+GD+ D Sbjct: 133 GFCVQVVTGDKDFVQIVDDDVRLYDPMKDVHTLPADVKARLGIEPGQMRDYLALIGDAVD 192 Query: 189 NIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQ 248 N+P VPG+G KTA L+Q G ++TL + +++ R + ++E + Sbjct: 193 NVPKVPGIGPKTATELIQQFGDVETLLSRLDEVKKPKIR------ENIASHRESLLRAKV 246 Query: 249 LATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAKP 308 L T KTD+ L++ L + A+ LF + EF ++ Q G A P Sbjct: 247 LVTFKTDLSLDVRMADLARRPVDAQRSRELFTELEFFALLKELP-----QQDGV--AGAP 299 Query: 309 QETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANL 368 E VT ++ D + L +A L + A++ A L Sbjct: 300 DEVKEKPAPLAVTPRLVGADAELAQLAGAVREAGAVTL----IPAYEGSP-----FGAKL 350 Query: 369 VGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGIL 428 VGL A+ G AY+P+ H L Q+ E + +LED K G +LK +L Sbjct: 351 VGLGVALPDGQTAYVPLRHAQLGV-TQVRPEAFTAAFREVLEDAAVKKGGHDLKALSLVL 409 Query: 429 ANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIA--GKGKNQLTF 486 AN GI L G D L SY+LN H + L+ L + A +GK Sbjct: 410 ANDGITLHGAHDDVELLSYLLNPSRREHALVDLSRERLNTELPPLPPAAEGKRGKKDRAL 469 Query: 487 NQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVK 546 +EE A A+ +L ++W +L+ K + ++E+PL+P+L+++ER GV Sbjct: 470 ADHTVEEVATGFAIRAEAARRLAPELWKELEAAKL-AALARDMELPLLPLLAQMERRGVL 528 Query: 547 IDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGA 606 +D L S ++ + K+ + AG EFN+ S QL +LF + + +K+ G Sbjct: 529 LDTAELSRTSVKVDAAVEAQVKEVYRHAGREFNIGSNPQLVEVLFTELKLPIIKRGKTG- 587 Query: 607 PSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTAT 666 PS +EVLE+L+ ++PLP I+EYR L+KLKSTY D LP ++ GR+HT+YHQA TAT Sbjct: 588 PSADQEVLEKLSEEHPLPGAIIEYRSLSKLKSTYLDTLPTLVA-ADGRIHTTYHQAATAT 646 Query: 667 GRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTA 726 GRLSSTDPNLQNIPVR + GR IR+AF+A E + +VSADYSQ+ELR++AH++ D L+ A Sbjct: 647 GRLSSTDPNLQNIPVRTDLGREIRRAFVAAEGHQLVSADYSQVELRLLAHIANDPVLIEA 706 Query: 727 FAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQK 786 F +DIH TAAEVFG+ E V EQRR AK +NFG+ YG+S GL +L I + A+ Sbjct: 707 FLHDEDIHTRTAAEVFGVAKEQVDREQRRVAKMVNFGIAYGLSPHGLGARLGIAQDVARD 766 Query: 787 YMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINA 846 ++ YF RY G+ Y+E T +A++ GYVETL GRR Y+ D+ S N AAERAAIN Sbjct: 767 IIERYFTRYAGIRRYLEETVDRARKTGYVETLYGRRRYMADLNSKNRGVAQAAERAAINM 826 Query: 847 PMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMEN 906 P+QGTAAD+IK+AM+AVD L A++ R RM++QVHDEL+FE +V+ V + M + Sbjct: 827 PIQGTAADLIKKAMLAVDEALTAQKLRTRMLLQVHDELLFEAPDAEVEQVKALAVKAMSS 886 Query: 907 CTRLDVPLLVEVGSGENWDQAH 928 L VPL VEVG+G +W AH Sbjct: 887 VADLKVPLKVEVGAGRSWADAH 908 >UniRef50_Q6MPP6 DNA polymerase I n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MPP6_BDEBA Length = 863 Score = 590 bits (1522), Expect = e-167, Method: Compositional matrix adjust. Identities = 367/926 (39%), Positives = 526/926 (56%), Gaps = 72/926 (7%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 + L+D S+ +RA++A L++ +G P A+YG L+M+ L+ + KP + +D K + Sbjct: 4 IYLIDVSAMFFRAFYAIRALSSPSGVPVNAVYGFLSMMIKLLKEEKPEYLVFCYDRKEPS 63 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR +++ YK+HR MPD+L QI + + +G+P V EADD+IGTL + + + Sbjct: 64 FRKTMYDGYKAHRTEMPDELAQQIPYIKRLADLLGVPAFEVESFEADDIIGTLTKWSRRN 123 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSD 188 G V I +GDKD QL+ +TL +TM E V K+GV P+ ID+LA++GD+SD Sbjct: 124 GMEVFIVSGDKDFGQLIEDGVTLYDTMKGVRYNAEGVFEKWGVRPDQFIDYLAIVGDASD 183 Query: 189 NIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQ 248 N+PGV GVGEK A LL+ ++ +Y +K+ +K++ KL +K+ A LS + Sbjct: 184 NVPGVKGVGEKGAIKLLEQFKHVEDIYENIDKVE------SKSVREKLIASKDNALLSKK 237 Query: 249 LATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRW------TADVEAGKWLQAKGA 302 L TI DV + E +++ A+EL + FK + T D A A Sbjct: 238 LVTISCDVPMPDDLEAYKLKPFKADELRAFLHELNFKSFEKSLFGTVDTTPAAAAPAAPA 297 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 P K + A AP ++I D+ IAK E+ T + D Sbjct: 298 GPLIK----TAAPSAP------------LSIADDVAPTIVIAKEERQFTEKSMTTRELAD 341 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 ++ + F+ GV +I + PD E L L + + G +LK Sbjct: 342 FLAEHQSLWGFSDMRGV--FIGTESQIIQVPDH-------EYLGKLTDTFQVQWHGYDLK 392 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 G + A+D+ L +Y+L AG D A+ + + ++A + Sbjct: 393 ---SFWHKIGAKTPVAAWDSQLAAYVLK--AG--DTSDFAKIYTRFMADVLPDLASP--S 443 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 QL Y A+ L + LQ +G V++ +++PL VL +ER Sbjct: 444 QL------------YNAQ-----LNFATTLKSQLQTVQGE-KVYQELDLPLARVLLSMER 485 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 GV+ID +L SEEL +AE+EK+ HE AGE FN+ S KQL ILFEK G+ KKT Sbjct: 486 LGVRIDKDLLAKQSEELAKDIAEIEKQIHEAAGESFNVGSPKQLGVILFEKLGLPAGKKT 545 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST EEVL L L++P+ K++L++R ++KLKSTY D LP MI+PK RVHTS++QA Sbjct: 546 KTGY-STDEEVL--LGLEHPIAKLVLQWREMSKLKSTYVDALPTMIDPKDERVHTSFNQA 602 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKG 722 +T TGRLSST PNLQNIP+R G+++R+AFIA ++S DYSQIELRI+AH+S D Sbjct: 603 LTTTGRLSSTQPNLQNIPIRTARGQQVRKAFIAAPRMKLLSVDYSQIELRILAHISEDPN 662 Query: 723 LLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRK 782 L AFAE DIH ATAAEVFG+PL+ VT+E RRSAKA+NFG+ YG AFGLA L I R Sbjct: 663 LCKAFAEDLDIHAATAAEVFGVPLKDVTAEHRRSAKAVNFGIAYGQGAFGLAENLGISRT 722 Query: 783 EAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERA 842 EA+ ++ YF R+ V EY++ T A E+GYVETL GRR Y+ +++S N A + ERA Sbjct: 723 EAKDIIERYFNRFKNVREYIDGTIKMAHEKGYVETLFGRRRYIDELQSKNMALKKFGERA 782 Query: 843 AINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQ 902 AINAP+QGTA+D++K+AMI V E+ VRM++QVHDEL+FE ++++ + Q+ Sbjct: 783 AINAPIQGTASDLVKKAMIEV-----FEKVPVRMLLQVHDELIFEDFEENLQKHSPQLVS 837 Query: 903 LMENCTRLDVPLLVEVGSGENWDQAH 928 +MEN +L VPL V G NWD+AH Sbjct: 838 IMENVMKLKVPLKVNYAIGNNWDEAH 863 >UniRef50_C4Z0G0 DNA polymerase I n=23 Tax=Bacteria RepID=C4Z0G0_EUBE2 Length = 894 Score = 587 bits (1514), Expect = e-166, Method: Compositional matrix adjust. Identities = 368/940 (39%), Positives = 539/940 (57%), Gaps = 70/940 (7%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 LIL+DG S L RA++ P LTN+ G T AMYG LN+L + + KP + V FD T Sbjct: 5 LILIDGHSILNRAFYGVPDLTNAEGIHTNAMYGFLNILFKFLDEEKPDYITVAFDLSAPT 64 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR ++F+ YK R PM +L+ Q+ + ++KAM + ++ G EADD++GT+A+E+ Sbjct: 65 FRHKVFDGYKGTRKPMQPELKQQVPLMKELLKAMNITVVEQEGYEADDILGTIAKESAAK 124 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNTILG------PEEVVNKYGVPPELIIDFLAL 182 G V I +GD+D+ QL +I + T + P +V N YGV P ID AL Sbjct: 125 GIDVSIVSGDRDLLQLADEHIKIRIPKTKKGVTEVEDYYPSDVFNLYGVTPHEFIDVKAL 184 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 MGD+SDNIPG PGVG KTA A++Q LD ++ E + L AK + +N E Sbjct: 185 MGDTSDNIPGAPGVGPKTASAIIQKYHSLDNVF---EHLCELKPPKAKI---SITENVEQ 238 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 +S L+ IK DV ++ E + E LFKKY FK Sbjct: 239 IKMSRFLSEIKIDVPIDYKVEDSKAGDFFNENSYELFKKYNFKNMLK------------- 285 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 K + T + + PE Y+ + I D ++ KA A E L Sbjct: 286 ----KFENTDIIAKDPEC------YEYFKKISDFADVENV---FNKAVDIAGGIEKIGLS 332 Query: 363 NISAN-LVGLSFAIEPGVAAYIPVA----HDYLDAPDQISRERALELLKPLLEDEKALKV 417 + N L+ + + YIPV+ YL D++S ++ + + Sbjct: 333 IVRENELIAVGITLSDTEIYYIPVSGFVTESYL--ADRLSDVVSVASNRNI--------A 382 Query: 418 GQNLK-----YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTIT 472 N+K +++ + Y + DT + +Y+L+ +D +SL +L + Sbjct: 383 SANIKDYLDIFEKDKINGYPLVSEKAFIDTAIAAYLLHPSNESYDYESLGREFLSLTYPS 442 Query: 473 FEEIAGKGKNQLTFNQIALEEAG----RYAAEDADVTLQLHLKMWPDLQKHKGPLNVFEN 528 E+ GK L+ N+ A+ EA +YA + + K+ L K + +FE Sbjct: 443 KTELLGK----LSINK-AVNEAEDNLIKYACLSSYAYYKCADKITEQL-KSENMYELFET 496 Query: 529 IEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQT 588 IEMPL+ VL +++ G+ +D + L ++S+ L +++ LEK+ +E AGEEFN++S KQL Sbjct: 497 IEMPLIFVLFEMQQQGISVDKQALVDYSKVLGTKISVLEKEIYEAAGEEFNINSPKQLGV 556 Query: 589 ILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMI 648 ILFE+ G+ KKT G ST+ +VLE+LA DYP+ ILEYR LAKLKSTY D L I Sbjct: 557 ILFERLGMPNGKKTKSGY-STAADVLEKLAPDYPVVSKILEYRQLAKLKSTYADGLTQYI 615 Query: 649 NPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQ 708 + + GR+H +++Q +TATGR+SST+PNLQNIP+R E G+ IR+ F+ + +V + ADYSQ Sbjct: 616 S-EDGRIHGTFNQTITATGRISSTEPNLQNIPIRMEMGKAIRKVFVPKDGFVFLDADYSQ 674 Query: 709 IELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGM 768 IELRI+AH+S D+ L+ A+ DIHRATAA+VFG+PLE VT EQRR+AKA+NFG+IYGM Sbjct: 675 IELRILAHMSGDEKLIEAYNSSADIHRATAAQVFGVPLEEVTDEQRRNAKAVNFGIIYGM 734 Query: 769 SAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDI 828 S+FGL++ L+I RKEA++Y++ YF YP + +++ + AKE+GY T+ RR +P+I Sbjct: 735 SSFGLSQDLSISRKEAKEYIERYFASYPTIKTFIDGLVSDAKEKGYSLTMYNRRREIPEI 794 Query: 829 KSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEV 888 KSSN +R+ ER A+NAP+QGTAADIIK AMI V L+ R R+I+QVHDEL+ E Sbjct: 795 KSSNFMQRSFGERVAMNAPIQGTAADIIKLAMINVYNALKEHNLRSRLILQVHDELLVET 854 Query: 889 HKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 +D+VD V + + M+N L VPL V++ G++W +AH Sbjct: 855 AEDEVDTVKQIMLDGMKNAVSLKVPLEVDLKEGKDWLEAH 894 >UniRef50_Q2JPZ4 DNA polymerase I n=3 Tax=Cyanobacteria RepID=Q2JPZ4_SYNJB Length = 931 Score = 587 bits (1513), Expect = e-166, Method: Compositional matrix adjust. Identities = 382/952 (40%), Positives = 542/952 (56%), Gaps = 53/952 (5%) Query: 6 QNP-LILVDGSSYLYRAYHAFP-----PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAA 59 Q P L+LVDG S YR+++AF L S G PT +G L L ++ +Y PTH A Sbjct: 4 QTPTLLLVDGHSLAYRSFYAFAYSREGGLRTSTGIPTSVSFGFLKSLLEVLDKYTPTHVA 63 Query: 60 VVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIG 119 V FD + TFR E E YKS RP P + +E L ++ A+ +P+L V G EADD++G Sbjct: 64 VAFDTRQPTFRHEADETYKSGRPETPPEFIEDVENLKQVLTALRIPILVVPGFEADDILG 123 Query: 120 TLAREAEKAGRPVLISTGDKDMAQLVTPN----ITLINTMTN-TILGPEEVVNKYGVPPE 174 TL+R A + R V I +GD+D+ QL+ + + +N+ + GPE+V K G+ P Sbjct: 124 TLSRLAPQDYR-VQILSGDQDLFQLIDTDGRVRVLHLNSKDRISEFGPEQVKEKLGIWPW 182 Query: 175 LIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAA 234 ++D+ AL GD SDNIPGV G+G K A LL+ G LD ++ ++I G + Sbjct: 183 QVVDYKALCGDPSDNIPGVKGIGPKRAVELLERYGSLDEIFDHLDEIQG-------KVQQ 235 Query: 235 KLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVE-- 292 L++ A+ S +A IK DV L E +++ ELL L +K EF + A V Sbjct: 236 YLKEGIPAAHHSQFMARIKCDVPLSPDWESMKLTGFDQAELLPLLEKLEFHSFIAQVRKI 295 Query: 293 ----AGKWLQAK--GA-----KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKA 341 G +A+ GA PA P E D A + ++ + V I+D Sbjct: 296 QTALGGIPTEAEVVGAFNPTGDPANAPDEALWFDFALDPVPSLPA----VRIIDTPEQLE 351 Query: 342 WIAKLEKAP--VFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRE 399 + + A + A+DTET SLD A LVG+ G AY+P+ H + E Sbjct: 352 LLRQELLACPGIVAWDTETTSLDPRDAQLVGIGCCWSEGDIAYLPIGHR---QGSNLDWE 408 Query: 400 RALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMD 459 + L+PL ED K QN KYD I +GI L+GI FD ML SY+L+ A H++ Sbjct: 409 LVKQSLQPLWEDPNRPKSLQNCKYDLSIFRAHGIRLQGIQFDPMLASYVLDPEAS-HNLA 467 Query: 460 SLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKH 519 LA L T +++++ GK + + I + + Y DA +L + LQK Sbjct: 468 DLAATHLNLPTTSYKKLLGKEQ---SIADIPISKVAEYCGTDAYCAYRLVPILTEKLQKT 524 Query: 520 KGPL-NVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEF 578 L ++F +E+PL VL +E G+++D + L S+EL L LE+KA+ AGE F Sbjct: 525 DPRLWDLFIQVELPLAQVLEEMEWIGIRVDTEFLRQFSQELEQELQSLEQKAYAQAGETF 584 Query: 579 NLSSTKQLQTILFEKQ--GIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKL 636 NL+S KQL ++LFEK I+ +KT G ST VLE+L D+PL + I++YR LAKL Sbjct: 585 NLNSPKQLGSLLFEKLKLDIRKTRKTATGY-STDASVLEKLEGDHPLIETIVQYRTLAKL 643 Query: 637 KSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP 696 KSTY D LP ++ TGRVHT ++Q VTATGRLSS++PNLQNIP+R E RRIRQAFI Sbjct: 644 KSTYVDALPALVRSDTGRVHTDFNQTVTATGRLSSSNPNLQNIPIRTEFSRRIRQAFIPQ 703 Query: 697 EDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRS 756 E +++ +ADYSQIELRI+AHLS++ LL F G+D+H TA + L + +TSE+RR Sbjct: 704 EGWLLTAADYSQIELRILAHLSQEPALLEGFRSGEDVHTLTARLL--LEKQEITSEERRL 761 Query: 757 AKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVE 816 AK IN+G+IYGM A AR + EA++++ + ERY G+ Y+ T A ++ GYVE Sbjct: 762 AKTINYGVIYGMGAQRFARTAGVSLSEAKQFLQRFNERYAGIFAYLRSTEAFVEKHGYVE 821 Query: 817 TLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRM 876 T+ GRR Y P++ G R+ A RAA+NAP+QG+A+DIIK AM+ + LQ R R+ Sbjct: 822 TILGRRRYFPNLSRLTGHRKQAELRAAVNAPIQGSASDIIKVAMVRLRQKLQ--NFRSRL 879 Query: 877 IMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 ++QVHDELVFEV + A+ I + ME L +PL+V++ G NW +A+ Sbjct: 880 LLQVHDELVFEVDPSEWQALKPLIQREMEGAVPLSIPLVVDIQIGHNWKEAN 931 >UniRef50_B9L837 DNA polymerase I n=2 Tax=Nautiliaceae RepID=B9L837_NAUPA Length = 872 Score = 581 bits (1498), Expect = e-164, Method: Compositional matrix adjust. Identities = 360/927 (38%), Positives = 542/927 (58%), Gaps = 72/927 (7%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK- 67 L ++D +L+R ++A PPL + G PTG + G LN + SL ++ + D+K K Sbjct: 3 LTIIDTFGFLFRNFYALPPLKSKKGFPTGMITGFLNFVASLGRDFETDYIVFTLDSKEKD 62 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 TFR E+F+ YK++RP P+DL+ Q+ ++ MG +L + G E+DD+I +LA+ A Sbjct: 63 TFRKEIFKDYKANRPEAPEDLKTQLPVAIELINEMGFKMLEIPGYESDDIIASLAKLAAS 122 Query: 128 AGRPVLISTGDKDMAQLVTPN-ITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDS 186 G V I + DKDM QL+ + I + + + + + + K+GV P+ I+F AL+GDS Sbjct: 123 QGIKVKIVSHDKDMYQLIDDDKIVIFDPIKKVEINEAKCIEKFGVHPKDFINFQALVGDS 182 Query: 187 SDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLS 246 SDNIPGV GVG KTA L+ L+ LY ++I G + KL +KE A+LS Sbjct: 183 SDNIPGVKGVGVKTAAKLINQYKTLENLYDHIDEIKG-------ALQKKLLADKENAFLS 235 Query: 247 YQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAA 306 +L T+KTD+ + E E + P +L + K D++ L+ K Sbjct: 236 RELVTLKTDLFDNINLE--EFKYPEINPILKVADK------LIDLDITSILER--VKKDG 285 Query: 307 KPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISA 366 +T + D + A +I +E+ L I K+E V AFDTETDSL+N Sbjct: 286 LYVKTKMPDNQVKFDAVLIE--------NEKELFEIIDKIEDKIV-AFDTETDSLEN--P 334 Query: 367 NLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRG 426 N+VG SFA E A Y+P+ H YL DQI + AL+ ++ +L D+K +G NLK+D Sbjct: 335 NIVGFSFAYEKNKAYYVPINHFYLGVTDQIPEKTALKAIQKIL-DKKV--IGHNLKFDFK 391 Query: 427 ILANYGIELRGIAFDTMLESYILN--SVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQL 484 +L YG+E+ DTM+ ++IL+ S G +DS+A+R+L H+ I F+E+ GK KN Sbjct: 392 MLKKYGLEIPTPHADTMILAWILDPDSPVG---LDSVAKRYLDHQNIKFKEVIGKRKN-- 446 Query: 485 TFNQIALEEAGRYAAEDADVTLQLHL----KMWPDLQKHKGPLNVFENIEMPLVPVLSRI 540 F+++ ++EA +YAAEDA ++L+L+ K+W +++ ENIEMP + +L I Sbjct: 447 -FSEVDIQEAAKYAAEDALISLKLYEILKEKLWEEVKWD------IENIEMPFINLLIDI 499 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK 600 E G+K+D + + E T +L L ++ + AG EFN+ STKQL ILFE + P+K Sbjct: 500 ESQGIKLDIEYMQKLQTETTEKLENLTQEIYRYAGSEFNIKSTKQLAHILFEVLKL-PVK 558 Query: 601 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPK---TGRVHT 657 + ST E+VL L +P+ + +LEYR L KL STY +PL K +++T Sbjct: 559 RKTKTGYSTDEKVLTSLKGTHPIIEKLLEYRKLDKLLSTYI--IPLQEYAKKDPNHKIYT 616 Query: 658 SYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHL 717 ++ Q TATGRLSS +PNLQNIP + IR AF+A +++V S DYSQIELR++AH Sbjct: 617 NFLQTGTATGRLSSKNPNLQNIPTSTD--INIRDAFVAEKEFV--SLDYSQIELRLLAHF 672 Query: 718 SRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQL 777 S+D+ L+ AF E KDIH TA ++FG E E R AK+INFGLIYGM L+ + Sbjct: 673 SKDEHLINAFLEDKDIHLETAVKIFG---ENRAKEYRPVAKSINFGLIYGMGPKKLSETI 729 Query: 778 NIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRA 837 N+ KEA+++++ YF +P V ++E T+ +A+E+GYVETL RR + D ++N A Sbjct: 730 NVSTKEAKEFIEKYFASFPTVKTFLENTKIEAREKGYVETLLKRRRFF-DFAAANARTLA 788 Query: 838 AAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVA 897 ER A+N QG+AADIIK+AMI + + P+ +M++Q+HDEL+FE+ D A Sbjct: 789 NFEREAVNTIFQGSAADIIKKAMIEI----KQRFPKAKMLLQIHDELIFEIDSRD---EA 841 Query: 898 KQIHQLMENCTRLDVPLLVEVGSGENW 924 + ++M+N +L+VPL V + G+ W Sbjct: 842 YEYKKIMQNVFKLEVPLKVGISFGKRW 868 >UniRef50_C4Z982 DNA polymerase I n=2 Tax=Clostridiales RepID=C4Z982_EUBR3 Length = 903 Score = 574 bits (1479), Expect = e-162, Method: Compositional matrix adjust. Identities = 372/943 (39%), Positives = 540/943 (57%), Gaps = 67/943 (7%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 L+L+DG S L RAYH P LTNS G T A+YG LN++ ++ + KP + V FD T Sbjct: 5 LVLIDGHSILNRAYHGLPDLTNSEGLHTNAVYGFLNIMFKILDEEKPDYLTVAFDVHAPT 64 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR +F+ YK R PM ++LR Q+ + M+ AMG+ ++ G EADD++GTL+ AEKA Sbjct: 65 FRHRMFDAYKGTRKPMDEELRQQVPMIKEMLTAMGIKIVEKEGYEADDILGTLSVRAEKA 124 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNTILGPE-------EVVNKYGVPPELIIDFLA 181 G V I +GD+D+ QL T ++ ++ G E +V+ KYGV P+ ID A Sbjct: 125 GMDVAIISGDRDLLQLATDHV-MVRIPKTKKTGTEIENYNTADVIEKYGVTPKEFIDVKA 183 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 L GD+SDNIPGVPG+GEKTA AL+ ++ ++ + E + R +K + EQ Sbjct: 184 LQGDTSDNIPGVPGIGEKTAGALIAKYHCIEAVHEDAENVK--PPRASKNIVEYWEQ--- 238 Query: 242 VAYLSYQLATIKTD--VELELTCEQLE--VQQPAAEELLGLFKKYEFKRWTADVEAGKWL 297 A +S +LATI D V+ E + +L V+ EE L K+YEFK + Sbjct: 239 -ALMSKELATIILDAPVDYEFSDAKLSGGVESLYTEEAFLLCKRYEFKNMLSRFNV---- 293 Query: 298 QAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTE 357 EAP+ A +++V + D +T ++ K + V Sbjct: 294 ------------------EAPKNNAE----EHFVVVRDLKTAESVFEKAKDREVAFAVVP 331 Query: 358 TDSLDNISANLVGLSFAIEPGVAAYIPVA-----HD--YLDAPDQISRERALELLKPLLE 410 +SL+N S + LS EP Y+ V+ D ++ D+IS E L L Sbjct: 332 GESLEN-SESDGQLSLFSEPVSNDYLAVSICFSEEDIYFICTGDEISSSFLDEKLNTL-- 388 Query: 411 DEKALKVGQNLKYDRGILANYGIEL--RGIAFDTMLESYILNSVAGRHDMDSLAERWLKH 468 E + +LK + + I+ RG FD M+ +Y++N + G + D++A+ +L Sbjct: 389 -EVKSWISPDLKTNLHRFKSKEIKADDRGRYFDMMVAAYLINPLVGEYPYDAVAKDYLGL 447 Query: 469 KTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDL-QKHK--GPLNV 525 + ++ GK L F Q+ ++E + A + A + K P L QK K L + Sbjct: 448 MLSSKKDYLGK----LDFTQM-MKEDEKKAVDCACYEVYTAWKSKPVLLQKLKEMNMLTL 502 Query: 526 FENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQ 585 + +IE+PLV VL +E G++ D L + ++L + + ELEKK +E AGEEFN++S KQ Sbjct: 503 YRDIELPLVFVLYDMENEGIRADGIKLKEYGDKLAVSITELEKKIYEAAGEEFNINSPKQ 562 Query: 586 LQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLP 645 L ILFEK G+ KKT G ST+ +VLE+LA +YP+ ILEYR L KLKSTY D L Sbjct: 563 LGVILFEKLGLPNEKKTKTGY-STAADVLEKLAPEYPIVADILEYRQLTKLKSTYADGLS 621 Query: 646 LMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSAD 705 I G++HT+ +Q +TATGRLSST+PNLQNIP+R E G+ IR+ F+ E + V +D Sbjct: 622 GYI-ASDGKIHTTLNQTITATGRLSSTEPNLQNIPIRIELGKLIRKVFLPEEGDLFVDSD 680 Query: 706 YSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLI 765 YSQIELR++A LS D+ ++ AF G+DIHR+TA+ VF P + VT QRR+AKA+NFG++ Sbjct: 681 YSQIELRVLAALSGDERMIEAFKNGQDIHRSTASLVFDTPFDEVTDLQRRNAKAVNFGIV 740 Query: 766 YGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYL 825 YG+SAFGL+ L I RKEAQ Y+D YF +YP + E++++T AK+ GY +T+ GR + Sbjct: 741 YGISAFGLSNDLGISRKEAQGYIDSYFVKYPKIKEFLDQTVLDAKKNGYTKTMFGRIRPI 800 Query: 826 PDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELV 885 P++ SSN +R ER A+N+P+QGTAADIIK AMI V L E + R+I+QVHDEL+ Sbjct: 801 PELNSSNFMQRQFGERVAMNSPIQGTAADIIKIAMIRVHDRLLDEGLKSRLILQVHDELL 860 Query: 886 FEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 E + + D V K + + M + V + V G +W AH Sbjct: 861 IETKEAEKDKVIKLLEKEMRGAVDMKVSMEVGTECGYDWYDAH 903 >UniRef50_Q55971 DNA polymerase I n=13 Tax=Cyanobacteria RepID=DPO1_SYNY3 Length = 986 Score = 572 bits (1475), Expect = e-161, Method: Compositional matrix adjust. Identities = 383/1001 (38%), Positives = 556/1001 (55%), Gaps = 107/1001 (10%) Query: 9 LILVDGSSYLYRAYHAFP-----PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 L+LVDG S +RAY+AF PL +AG PT +G LN L ++ KP A+ FD Sbjct: 10 LLLVDGHSLAFRAYYAFGLSKKGPLRTTAGIPTSVCFGFLNSLMQVMESQKPAAIAIAFD 69 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 + TFR E YKS+R P+D + L +++A+ L + +G EADD++GTLA Sbjct: 70 RREPTFRHEADGAYKSNRQETPEDFAEDLSYLQQLLEALNLQTITYAGYEADDILGTLAC 129 Query: 124 EAEKAGRPVLISTGDKDMAQLVTP--NITLINTMTNTI--------LGPEEVVNKYGVPP 173 + AG V I +GD+D+ QLV+P NI+++ N L + VV+K GV P Sbjct: 130 QGSDAGYQVKILSGDRDLFQLVSPEKNISVLYLTRNPFSSNTGYDELDWQGVVDKMGVTP 189 Query: 174 ELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMA 233 I+DF AL GD SD IPG+ G+GEKTA LL L+ +Y +I G + Sbjct: 190 AQIVDFKALCGDKSDCIPGINGIGEKTAIKLLAEYETLEKVYENLAQIKG-------ALK 242 Query: 234 AKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEA 293 +L+ K+ A S LA I DV L +T E L++ + + L+ L +K E + + ++A Sbjct: 243 TRLDNGKDDAMHSQMLARIVVDVPLPVTWEDLQLTGFSTDRLVPLLEKLELRTFIDKIQA 302 Query: 294 GKWLQAKGAKPA--------AKP------------------QETSVADEAPEVTATVISY 327 + P +P Q+ S+ D P V Sbjct: 303 FHRNFSDNQSPVPMGNEADNGEPKKTVKAKKSKEKVNPDDSQQLSLFDGVPVVNQE---- 358 Query: 328 DNYVTI-LDEET----------LKAWIAKLEKA-----PVFAFDTETDSLDNISANLVGL 371 D +TI L ++ L+A + +L+K PV A+DTETDSLD + ANLVG+ Sbjct: 359 DGLITIQLPKQIQPQIITTIAQLEALVEELKKHTDADFPV-AWDTETDSLDPLVANLVGI 417 Query: 372 SFAI--EPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILA 429 A EP AYIP+ H +Q+S +LL +L + KV QN K+DR +LA Sbjct: 418 GCAWGQEPNQVAYIPLKHH---QGEQLSLGIIKDLLGEILGNAIYPKVLQNAKFDRRVLA 474 Query: 430 NYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERW-LKHKTITFEEIAGKGKNQLTFNQ 488 ++GIEL G+ DTML SY+L H++ L R+ L ++++++ G K+Q T Sbjct: 475 HHGIELGGVVLDTMLASYVLQP-EETHNLTDLCRRYNLGLVALSYKDL-GLKKDQ-TIAD 531 Query: 489 IALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKID 548 + LE AG+Y D T L K+ +L ++ + + IE PL +L+ +E G++ID Sbjct: 532 LPLETAGQYCGLDCYATYLLASKLQKELDQYPELKEILKEIEQPLEKILAAMEDRGIRID 591 Query: 549 PKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGI--KPLKKTPGGA 606 L S++L L +E A+E AGE FNLSS KQL TILF+K G+ K +KT G Sbjct: 592 CDYLQTLSQQLAENLLTIETAAYEAAGESFNLSSPKQLGTILFDKLGLDRKKSRKTKTGY 651 Query: 607 PSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTAT 666 ST LE+L D+P+ ILE+R LAKLKSTY D LP ++N +T R+HT ++QAVT+T Sbjct: 652 -STDHATLEKLQGDHPIIDAILEHRTLAKLKSTYVDALPELVNGQTQRIHTDFNQAVTST 710 Query: 667 GRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTA 726 GRLSS++PNLQNIP+R++ R+IR+AF+ +D+++VSADYSQIELRI+AHLS++ LL A Sbjct: 711 GRLSSSNPNLQNIPIRSDFSRQIRRAFLPQKDWLLVSADYSQIELRILAHLSQEPVLLQA 770 Query: 727 FAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQK 786 + + +D+H TA +FG E +T +R K INFG+IYGM A AR+ I E ++ Sbjct: 771 YGDRQDVHGVTAKLLFG--KEDITPAERNLGKTINFGVIYGMGAQRFARETGISAVEGRE 828 Query: 787 YMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLY--------------------LP 826 ++D Y Y V +Y+E + +A +GYV T+ GRR Y L Sbjct: 829 FIDRYHRTYAQVFDYLETMKLEAIAKGYVTTIVGRRRYFNFVTEALRQLRGKTVTELDLV 888 Query: 827 DIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVF 886 D+K + A R+A NAP+QG++ADIIK AM+ + L++ Q RM++QVHDEL+F Sbjct: 889 DVKMN--YNDAQLLRSAANAPIQGSSADIIKIAMVKLAKLLESYQ--TRMLLQVHDELIF 944 Query: 887 EVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 E+ ++ + +A I ME L VPL+VE+ G NW +A Sbjct: 945 EMPPEEWEELAPLIQNTMEQALTLSVPLVVEMHRGSNWMEA 985 >UniRef50_Q5HCC8 DNA polymerase I n=14 Tax=Rickettsiales RepID=Q5HCC8_EHRRW Length = 865 Score = 572 bits (1474), Expect = e-161, Method: Compositional matrix adjust. Identities = 347/917 (37%), Positives = 506/917 (55%), Gaps = 71/917 (7%) Query: 11 LVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKTFR 70 ++D L+RAY+A P L+ S G P G +YG +NML I + + V FD GK FR Sbjct: 11 IIDAYGLLFRAYYALPHLSTSNGVPIGGVYGFINMLLKYIEVHTANYLVVAFDTGGKNFR 70 Query: 71 DELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA-G 129 +++ YKS+R +P+DL +Q L V A+ + V+G EADDVI TL++ K G Sbjct: 71 HDIYPQYKSNRIKLPEDLISQFPLLREAVNALNISYEEVAGYEADDVIATLSKNYSKFDG 130 Query: 130 RPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSDN 189 V + T DKD+ QL+ NI + + + N + ++V +K+G+ ++DFL+L GD+SDN Sbjct: 131 IKVTVVTSDKDLLQLLEHNIHIFDPVKNKYIVEDDVQDKFGISSSKLLDFLSLTGDTSDN 190 Query: 190 IPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQL 249 IPGVPG+G KTA LL G LD L ++P I R + + + ++ A LS QL Sbjct: 191 IPGVPGIGIKTAAKLLNNFGSLDNLLSQPHAIEKNKCRES------IIKYQDQAILSRQL 244 Query: 250 ATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAKPQ 309 T+ V L+ E+ + P ++L+ KKYE + + GK + A Sbjct: 245 LTLCDTVNLDNNIEKYRSRIPDTQKLVKFLKKYELQSLINKI--GKIFKT----DAFTVY 298 Query: 310 ETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLV 369 + S + + VI Y + E LK +I + A D DN + N + Sbjct: 299 QKSGYNNENSIKTNVIPYSS-------EELKTFIENCKNEGTIAL--YIDITDN-TINSM 348 Query: 370 GLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILA 429 LS+ + G YI H AL+L+KPL + LKV ++K I+ Sbjct: 349 SLSY--KEGTILYINKEH----------ITHALDLIKPLFSLDHILKVMYDVKTLFKIIQ 396 Query: 430 NYGIELRGIAFDTML-ESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQ 488 + AFD +L SY L++ H + ++ R + IT E I Sbjct: 397 E---DTNITAFDDILIMSYSLDAGLHDHTLKNIIIRNIDKHDITNENIT----------- 442 Query: 489 IALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKID 548 A L LH + +L ++ ++ IE PL+ VL +E+ G+ ID Sbjct: 443 -------------ASTLLSLHTALRRNLFTNQ-LCTIYYRIEKPLINVLHNMEKIGIMID 488 Query: 549 PKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPS 608 +L S + +++ LE+K ++++GEEFN++S++QL TILF+K GIK KK G S Sbjct: 489 GSILDKLSSTFSDKISVLEEKIYKLSGEEFNIASSRQLSTILFDKMGIKKGKKLSSGTYS 548 Query: 609 TSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATG 667 T EVL ELA + + IL++R KLK+TYTD L I+ T RVHT Y T TG Sbjct: 549 TDAEVLHELAFNGVEIADEILKWRHFTKLKNTYTDVLAKQIDNNTSRVHTFYSMTSTVTG 608 Query: 668 RLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAF 727 RLSS++PNLQNIP+R+EEG IR AFIA Y ++SADYSQIELRIMAH++ + AF Sbjct: 609 RLSSSNPNLQNIPIRSEEGNAIRNAFIAKSGYKLISADYSQIELRIMAHIASVQAFRDAF 668 Query: 728 AEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKY 787 + +DIH TA ++F + + + RR AK+INFG+IYG+S FGLA+QL I R EA K+ Sbjct: 669 SLDQDIHLITAQQIFN--TQNIDKKLRRKAKSINFGIIYGISPFGLAKQLGITRSEASKH 726 Query: 788 MDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAP 847 ++ YF+ YP + Y+E + A+ GY T+ GR+ ++ DI S+N A R +ERAA+NAP Sbjct: 727 IENYFKSYPEIKSYIEDIKVYARTHGYTRTVFGRKCFIKDINSNNHALRNFSERAAVNAP 786 Query: 848 MQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENC 907 +QGT+ADIIK +MI + L+ MI+QVHDEL+FEV +D VD K I ++ME Sbjct: 787 LQGTSADIIKMSMIHLFDRLKTGY----MILQVHDELLFEVPEDHVDNTVKLIKEVMEGI 842 Query: 908 TRLDVPLLVEVGSGENW 924 +L VPL V++ G+NW Sbjct: 843 VKLSVPLKVDITIGDNW 859 >UniRef50_C2MBR8 DNA polymerase type I n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MBR8_9PORP Length = 948 Score = 571 bits (1472), Expect = e-161, Method: Compositional matrix adjust. Identities = 371/982 (37%), Positives = 555/982 (56%), Gaps = 99/982 (10%) Query: 9 LILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L L+D + +YRAY+AF PL ++ G T A+YG + L+ +I + +P + AV D G Sbjct: 4 LYLLDAYALIYRAYYAFINRPLVDAQGRDTSALYGFASTLQDIIDKERPDYIAVAMDMPG 63 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 TFR + + YK++RP P+ +R + + +V+A +PLL V G EADD+IGTL+R+A Sbjct: 64 GTFRHKEYPEYKANRPETPETIRFSMPYIKELVQAYQIPLLGVEGYEADDLIGTLSRQAV 123 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVP-PELIIDFLA 181 +AG V + T DKD QLV P+ + +LG EE+ KYG+ P +ID+L Sbjct: 124 EAGYEVRMVTPDKDYGQLVGPHAQMFAPQRTGSGFELLGAEEITAKYGIRYPLQMIDYLG 183 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 L+GDSSDN+PG PG+G+ AQ LL+ ++ +YA +++ T A KL KE Sbjct: 184 LVGDSSDNVPGCPGIGKVAAQRLLEEFDTIEDIYARIDQVK-------PTYAKKLLAAKE 236 Query: 242 VAYLSYQLATIKTDVE-LELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 LS L TI TDV + +Q++ + P + +FK++ F L + Sbjct: 237 QTMLSRHLVTIVTDVPGVTFDPDQMKWRGPDHAAVERIFKEFAFTS----------LLKR 286 Query: 301 GAKPAAKPQETSVAD-----EAPEVTATV---------ISYDNYVTI-------LDEETL 339 KPAA + + D AP + AT+ +NY T+ E + Sbjct: 287 IGKPAATAAQVGLFDLGGSSAAPSLPATIEVAGPVSATTPLENYKTVGVTFTEVQGYEAV 346 Query: 340 KAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRE 399 +L + V AFDTETD LD + A +VG+S + A +IP+ S E Sbjct: 347 SQLAKQLAGSSVVAFDTETDGLDALCAGIVGMSLCADEKQAYFIPLPE---------SAE 397 Query: 400 RALELLKPL---LEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRH 456 A +L PL ++DE+ LKV N K+D +L YG+ +DTML Y++++ G H Sbjct: 398 EATHILSPLKELMQDERVLKVAHNAKFDLEVLTRYGLPEARPLYDTMLAHYLIDADQG-H 456 Query: 457 DMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQL----HLKM 512 +D LA L++ TI +++++ L + + YA+EDA VTL+L H ++ Sbjct: 457 SLDELAGGLLRYDTIRYKDLSPLEIFALR-TDVDPKLLCDYASEDAYVTLRLYQALHKQL 515 Query: 513 WPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHE 572 P Q+ + +E+PL+ VL +E+ G+ +D + L +EL + LEK+ Sbjct: 516 SPTEQR------LLTEVEIPLLYVLMHMEQRGIVLDIEALQRSRQELLESVLRLEKEIQS 569 Query: 573 IAGEEFNL--SSTKQLQTILFEKQGI--KPLKKTPGGAPSTSEEVLEELALDYPLPKVIL 628 + NL +S KQ+ +LF++ I KP +KT G+ T+EE L L +P+ +IL Sbjct: 570 YSSRGLNLKVNSPKQIGELLFDELQIMEKP-RKTKTGSYVTNEETLLPLRSLHPVVALIL 628 Query: 629 EYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRR 688 +YR KL +TY D LP M P G++HTSY+QAVTATGRLSS++PNLQNIP+R++ GR Sbjct: 629 DYREARKLLNTYIDPLPKMCYPD-GKLHTSYNQAVTATGRLSSSNPNLQNIPIRSDLGRP 687 Query: 689 IRQAFIA------------PEDY--------VIVSADYSQIELRIMAHLSRDKGLLTAFA 728 +R+AF+A P D+ V++SADYSQ+ELR+MAHLS+D ++ +F Sbjct: 688 LRRAFVADPYYTPRLSACAPVDHTHEKPIGAVLLSADYSQVELRVMAHLSQDPAMIHSFL 747 Query: 729 EGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYM 788 G DIH ATAA+VF + E VT R AK NFG+ YG++ +GL+++LNIP EA + + Sbjct: 748 SGDDIHTATAAKVFKVAPEEVTPLMRSKAKTANFGINYGITPYGLSQRLNIPVGEAAELI 807 Query: 789 DLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPM 848 YF + + +M A A E+GY ET GRR L +++++ GA+R AER AINAP+ Sbjct: 808 KEYFATFTHIQAFMNEAIALATERGYTETAFGRRRQLRNLRTARGAQRGNAERNAINAPI 867 Query: 849 QGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCT 908 QGTAADIIK AMI V+ L +Q R +++QVHDELV V+ D+++ V + + ME C Sbjct: 868 QGTAADIIKIAMIRVEEELTKQQLRSYLVLQVHDELVLNVYLDELERVTALVREAME-CA 926 Query: 909 --RLDVPLLVEVGSGENWDQAH 928 VPL+VE+G+G++W +AH Sbjct: 927 WPECSVPLVVEIGTGKDWLEAH 948 >UniRef50_Q7WZP8 DNA polymerase type I n=2 Tax=unclassified Bacteroidetes RepID=Q7WZP8_9BACT Length = 939 Score = 570 bits (1470), Expect = e-161, Method: Compositional matrix adjust. Identities = 359/947 (37%), Positives = 534/947 (56%), Gaps = 55/947 (5%) Query: 9 LILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L L+DG S +YRA+ A T + G TGA+ G +N L +L+ + KPTH V FD K Sbjct: 8 LFLLDGMSLIYRAHFALGKAATTTAQGLKTGAILGFVNTLVALLEKEKPTHLIVAFDGKE 67 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 KTFR LF YKSHRP P+++ I + ++++ G+ + SG EADD++GTLA++A Sbjct: 68 KTFRHALFPAYKSHRPVQPEEISIAIPYIKSILEGFGILAITYSGYEADDLLGTLAKKAA 127 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMT----NTILGPEEVVNKYGVP-PELIIDFLA 181 G I + DKD+AQ+V NI L + +TILG +E++ ++ + PE + D LA Sbjct: 128 VMGCRTYIMSTDKDLAQIVGDNIYLYKPSSYGEKSTILGEKEILAQWEIARPEQVRDILA 187 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 L GD SD IPG+P +G+KTA+ L++ L+ + A + G + A L Q + Sbjct: 188 LEGDPSDFIPGIPSIGKKTARKLIKEFDNLENILAHSHMLTG-------KLKANLIQYAD 240 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK- 300 LS +LATI+T+V + L E+ Q P +L +F EFK+ + GK K Sbjct: 241 QGILSKELATIRTNVPITLDLEKCHYQGPNKVKLEPIFSLLEFKQLKQRL-FGKPNPEKA 299 Query: 301 ---------GAKPAAKPQETSVA-----DEAPEVTATVISYDNYVTILDEETLKAWIAKL 346 G P AK QE + + D P T D Y I + + KL Sbjct: 300 TNQPVGLFDGINPMAKSQENNHSNGHGLDRQPHTTEGQHEQDAYALIETLPACEKLLEKL 359 Query: 347 EKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLK 406 E A +AFD T +D A+L+G++FA +PG A YI + P++ + + L LL+ Sbjct: 360 ESATKWAFDIATTGMDPHLADLLGIAFAYQPGTAYYIALP------PNKAAAQPFLALLQ 413 Query: 407 PLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWL 466 PL + LKVG NLK ++ +G+ + FDTM+ ++ L + H + +L+E++L Sbjct: 414 PLFQRTDVLKVGHNLKNALIVMQRHGLSIAPPLFDTMI-AHGLVAADMDHHLTTLSEQYL 472 Query: 467 KHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVF 526 H++ K N+ E YA E AD+ L ++ K+ L++HK +F Sbjct: 473 NHRSYL------KPPNRAEKES---EGIKNYAGEGADLVLHIYPKIAQALREHKVA-TLF 522 Query: 527 ENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQL 586 +EMPLV VL +E GV ID L E+ L++K + +A FN+ S KQL Sbjct: 523 YRVEMPLVQVLVAMELAGVSIDLPFLATLGSEMEPTTKALKEKIYTLAQTTFNIDSPKQL 582 Query: 587 QTILFEKQGI--KPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKL 644 +LFEK + KP+K T GG +T E +L +L+ +P+ +I+EYR KL+STY D L Sbjct: 583 GVVLFEKLALHTKPMK-TKGGQYATGEAILAKLSKVHPIVPLIMEYRTWQKLRSTYVDAL 641 Query: 645 PLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY-VIVS 703 P +++P R+H +YHQ V TGRLS+T PNLQ IP+R GR +R+AFI + + S Sbjct: 642 PTLLHPIDQRLHATYHQTVVTTGRLSATGPNLQQIPIRTPTGRALRKAFIPHQKGDCLFS 701 Query: 704 ADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFG 763 ADYSQIELRIMA ++D ++ AF +DIH+ TA ++F + V E R+ AK NFG Sbjct: 702 ADYSQIELRIMAAYAQDTTMIMAFQSDQDIHQITAQKLFKTVI--VDQEMRQKAKIANFG 759 Query: 764 LIYGMSAFGLARQL-NIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRR 822 +IYG+S FGL+ ++ ++ RKEA + ++ YFE +PG+ Y++ + A A+ GYV TL GR+ Sbjct: 760 IIYGISPFGLSERMEHLSRKEAAELIEAYFEAFPGIKTYIDDSIAHAEANGYVRTLLGRK 819 Query: 823 LYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHD 882 +LPD+ +SN R A R AIN P+QG+AA++IK AMI + WL+ + ++I+QVHD Sbjct: 820 RFLPDLYASNPTTRGVARRNAINTPIQGSAAEMIKLAMIHIQDWLEKHKLSTKLIIQVHD 879 Query: 883 ELVFEVHKDDVDAVAKQIHQLMENCTRL-DVPLLVEVGSGENWDQAH 928 ELVF V + ++ + I LM L +VP+ V G NW +AH Sbjct: 880 ELVFNVPRSEIADIQHHIPLLMATALPLENVPIKVNWNIGANWLEAH 926 >UniRef50_C5B5N3 DNA polymerase I n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B5N3_METEA Length = 957 Score = 570 bits (1470), Expect = e-161, Method: Compositional matrix adjust. Identities = 376/962 (39%), Positives = 518/962 (53%), Gaps = 51/962 (5%) Query: 5 PQNPLILVDGSSYLYRAYHAF---PPLTN---SAGEPTGA----MYGVLNMLRSLIMQYK 54 P + LILVD SS+++RAYH P N S G PTGA + +R Sbjct: 9 PGSRLILVDASSFVFRAYHQSLNQDPKYNARPSDGLPTGAARLFFAKLFQFVRDGAAGVV 68 Query: 55 PTHAAVVFDAKGK-TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVE 113 PTH +VFD + + R +L+ YK++R P DLR Q+ + V+A GLP++ + E Sbjct: 69 PTHLGIVFDKGSRESHRRQLYPEYKANRSETPADLRPQMPLVREAVRAFGLPVIELDRTE 128 Query: 114 ADDVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGP----------E 163 ADD+I T AR AE G V+I + DKD+ QLV+P I + + + P E Sbjct: 129 ADDLIATYARAAEAKGAEVVIVSADKDLQQLVSPRIRFYDAESGSKGKPGYRPERNLDVE 188 Query: 164 EVVNKY-GVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIA 222 VV K+ G+ P I D LAL+GD+SDNIPGVPG+G KTA LL G L+ L + Sbjct: 189 AVVAKWEGLQPGQIGDALALIGDTSDNIPGVPGIGLKTAAQLLLEYGSLEAL------LE 242 Query: 223 GLSFRGAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKY 282 G S L E A LS +L + V+L + + L + P L+ K Sbjct: 243 GASAIKQPKRRENLLAAAEGARLSRRLVELDCSVDLPVDPDTLALPAPDGRRLVAYLKAL 302 Query: 283 EFKRWTADVEAGKWLQAKGAKP----AAKPQETSVADEAPEVTATVISYDNYVTILDEET 338 E V + A P AA P AD D Y + ++ Sbjct: 303 ELPALAKRVAKELGVDADRVPPDAELAASPTTAPGADGPVMPPFPAADPDAYGLVATQDD 362 Query: 339 LKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAH----DYLD--- 391 L WIA A F L A +GL A+EPG A Y+P+ H D L Sbjct: 363 LDGWIAAARAAGRFGL-----HLHRGDAGAIGLGIAVEPGRAVYVPIEHRAGGDGLFGGL 417 Query: 392 APDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNS 451 AP QI A + L+ED K+ +LK G E+ G A D L SY L S Sbjct: 418 APGQIDAAAAWGAVGALMEDAGVRKIVHDLKGTAKAAGRLGFEIAG-ADDVGLMSYALES 476 Query: 452 VAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLK 511 H + LA R L + + + G+G+ ++ +A A AA+ AD L+L Sbjct: 477 GLTGHGLPELAARHLGNAAPDPDALRGQGRGRVDAEAVAPRAAAPVAAQIADAVLRLWTV 536 Query: 512 MWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAH 571 + P L+ V+E +E+P+VPVL+R+E GV+ID VL S + LA LE + H Sbjct: 537 LAPRLEGTP-TQAVYEELELPMVPVLARMEAAGVRIDRAVLTELSRDFGATLARLETEIH 595 Query: 572 EIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELAL-DYPLPKVILEY 630 E+ G F + S KQ+ +LF + G+ ++TP G +T +LEELA + LP +L++ Sbjct: 596 ELGGGPFQIGSPKQIGDVLFGRLGLPGGRRTPSGQWATGATILEELAAAGHALPGRLLDW 655 Query: 631 RGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIR 690 R +KLKSTY D L + T RVHT++ A T TGRLSS+DP L NIP+R EEGRRIR Sbjct: 656 RRTSKLKSTYADALLSAADRGTDRVHTTFSLAATTTGRLSSSDPGLHNIPIRTEEGRRIR 715 Query: 691 QAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVT 750 AF+A E + I+SADYSQ+ELR++AH++ + AFAEG DIH ATA+++FG+P+ V Sbjct: 716 AAFVAAEGHRILSADYSQVELRLLAHIADVPRMREAFAEGVDIHAATASDMFGVPVGAVP 775 Query: 751 SEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAK 810 E RR AK INFG++YG+SAFGLA +L I R+EA +++ YFER+PG+ +Y+E T+ + Sbjct: 776 GELRRRAKTINFGIVYGISAFGLADRLGIGRQEAAEFIARYFERFPGIRDYVEGTKTFCR 835 Query: 811 EQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAE 870 E G+V TL GR + P I S N + R ER A+NAP+QGTAADII+RAMI ++ L Sbjct: 836 EHGFVRTLFGRVCHYPGITSGNVSERMGVERQAVNAPIQGTAADIIRRAMIRMEGALADS 895 Query: 871 QPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLD----VPLLVEVGSGENWDQ 926 RM++QVHDELVFEV + + A+ + +M D VPL+VE S ENW++ Sbjct: 896 GLSARMLLQVHDELVFEVAEAECADTARVVSDVMAGAAAPDIDLAVPLVVEARSAENWER 955 Query: 927 AH 928 AH Sbjct: 956 AH 957 >UniRef50_Q6X9S0 DNA polymerase I n=3 Tax=Bacillales RepID=Q6X9S0_9BACL Length = 903 Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust. Identities = 368/938 (39%), Positives = 532/938 (56%), Gaps = 64/938 (6%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 LILVDG+S RA++A L+ G T A+YG NML LI + +PTH V FDA T Sbjct: 4 LILVDGNSVANRAFYAVRLLSTRGGLHTNAVYGFANMLLKLIEEERPTHFLVAFDAGKAT 63 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR +E YK+ R P +L Q + +V+A G+ + EADD+IGTLA+ AE Sbjct: 64 FRHREYEAYKAGRLQTPPELSEQFPYIRELVRAFGVASGELEEYEADDMIGTLAKRAEAE 123 Query: 129 GRPVLISTGDKDMAQLVTPNITLINT---MTNT-ILGPEEVVNKYGVPPELIIDFLALMG 184 G L+ TGD+D+ QLV+ +T+ T +T T P + +YG P+ I D LMG Sbjct: 124 GVDTLVVTGDRDLLQLVSDRVTVALTRKGITETERYDPARIREEYGFDPDRIRDLKGLMG 183 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 D+SDN+PGVPGVGEKTA LL+ G L+++ +IAG + L + + A Sbjct: 184 DASDNLPGVPGVGEKTALKLLRQYGSLESVLEHASEIAG-------KLGENLRAHADAAR 236 Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRW-----------TADVEA 293 LS +LATI V L+ + L + +P L L ++ EFK ADV+ Sbjct: 237 LSKRLATIDCAVPLQSGWDWLRLGEPDRAALASLLRQLEFKSLLKRLGLDGTSADADVDG 296 Query: 294 GKWLQAKGAKPA--AKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPV 351 + A+PA +P+ +VA+E +V D E ++ +++LE A Sbjct: 297 VR----SSARPADEKRPRAVAVAEEGVDVRCP----DR------PEEVEEALSRLEAAQS 342 Query: 352 FAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALEL-LKPL-- 408 + D+ + + G+++ + A +IP ER ++ ++PL Sbjct: 343 VVVEVTGDNPHD--GEVRGVAW-WDGHTAYFIPF-------------ERLVQSDMRPLAD 386 Query: 409 -LEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLK 467 L D + K + L +G+ RG +F T + +Y+L+ RH + L+ R+ Sbjct: 387 WLADARRPKRTHDSHRAEVALFWHGLAFRGTSFCTHIAAYLLDPTESRHTLADLSRRYGL 446 Query: 468 HKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFE 527 E++ GKG F + RY A + +L + DL G ++F Sbjct: 447 PPVPEAEDVYGKGAK---FKVPDRDTLARYVGRKAALVARLVPLLEADLAAC-GMRSLFY 502 Query: 528 NIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQ 587 ++E+PL L+ +E GV++D L + EEL A++E++ +E+AG FN+ STKQL Sbjct: 503 DLELPLSSELAVMETVGVRVDAAALAAYGEELREAAAKVEREIYELAGTTFNIGSTKQLG 562 Query: 588 TILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLM 647 ILF+K G+ +KKT G ST +VLEELA +P+ + IL YR L KL+STY + L Sbjct: 563 EILFDKLGLPVVKKTKTGY-STDADVLEELAPYHPIVEKILHYRQLTKLQSTYIEGLLKE 621 Query: 648 INPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE-DYVIVSADY 706 I P+TG++HT Y Q + ATGRLSS PNLQNIP+R EEGR+IR+AF+ E +++++ADY Sbjct: 622 IRPQTGKIHTYYQQTIAATGRLSSQFPNLQNIPIRLEEGRKIRKAFVPSEPGWLMLAADY 681 Query: 707 SQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIY 766 SQIELR++AH+S D+ L AF G DIH TA +VFG+ + V + RR AKA+NFG+IY Sbjct: 682 SQIELRVLAHVSGDERLKEAFRTGMDIHTKTAMDVFGVSEDRVDARMRRQAKAVNFGIIY 741 Query: 767 GMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLP 826 G+S FGLA+ LNI RKEA +++ YF + GV Y ER QA+ GYV TL GRR YLP Sbjct: 742 GISDFGLAQNLNISRKEAAEFIRQYFAVFSGVKAYRERIVEQARRDGYVTTLLGRRRYLP 801 Query: 827 DIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVF 886 DI +SN R+ AER A+N P+QGTAADIIK AM+ + ++ + RM++QVHDELVF Sbjct: 802 DINASNYNLRSFAERTAMNTPIQGTAADIIKTAMVRLTRRMRDVGLKSRMLLQVHDELVF 861 Query: 887 EVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 EV D++DA+ + + +ME+ LDVPL V+V G +W Sbjct: 862 EVPPDELDAMRELVTDVMESAVPLDVPLKVDVSWGADW 899 >UniRef50_D1VS49 DNA polymerase I n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VS49_9FIRM Length = 885 Score = 569 bits (1466), Expect = e-160, Method: Compositional matrix adjust. Identities = 350/930 (37%), Positives = 531/930 (57%), Gaps = 60/930 (6%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + +N +++DGSS +RA++A P L G T A+YG + ML + I + KP+H V FD Sbjct: 1 MSKNIFLIIDGSSLFFRAFYALPLLKTKRGIYTNAIYGFVMMLENAIERVKPSHIVVCFD 60 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 KGKTFR EL++ YK R P++L Q + ++K M + +L EADD+ GTL+ Sbjct: 61 RKGKTFRSELYKDYKGTRQKTPNELEQQFPLVRDILKYMNIVVLDSPVYEADDIAGTLSL 120 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVN------KYGVPPELII 177 A K G + TGDKD QLV N ++ MT + EVVN YG+ P+ I Sbjct: 121 IASKEGYKSYLLTGDKDYYQLVDDNTNVL--MTRKGITELEVVNLQSINDDYGISPQEFI 178 Query: 178 DFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLE 237 D LMGDSSDNIPGVPG+G KT L++ ++ LY +I+G K + LE Sbjct: 179 DLKGLMGDSSDNIPGVPGIGPKTGLKLIKEYSTIENLYNHLSEISG------KKLKENLE 232 Query: 238 QNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWL 297 +NK A++S +L TI +++L + L++++ E L L++ +EF K L Sbjct: 233 ENKVQAFMSKKLGTIVRNIDLPVGLSDLKIKEYDYENLSKLYRDFEFNSIL------KRL 286 Query: 298 QAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTE 357 K K ++ E++ T N ++++ I ++ + FAF Sbjct: 287 PEKYQK-----------EKTEEISDTFFQISN-------DSIEDIIENIKTSKSFAFKFI 328 Query: 358 TDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKV 417 +D I + AI P Y DY D +S LK L ED+ K+ Sbjct: 329 SDG--KIYEGIDPFKIAILP--KGYNTSVIDY--NKDNLSN------LKALWEDDSIEKL 376 Query: 418 GQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIA 477 G +LK D +L I+L+ D+M+ Y+LNS +++D LA + + EE+ Sbjct: 377 GYDLKEDIIVLQYNKIDLKNYCHDSMIAEYLLNSTESNYEIDHLASSYFNKAYKSEEELL 436 Query: 478 GKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHK----GPLNVFENIEMPL 533 GKG + F +I + Y + L + K+ P LQ K G +++ N+E+PL Sbjct: 437 GKGVKKKKFQEIDEGDLNSYFS----YILNMVYKISP-LQMQKIEAEGMKDLYVNVELPL 491 Query: 534 VPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEK 593 + VL+ +E G++ D +L+ E++ R+ +LE ++ A E+FN++S KQL ILFEK Sbjct: 492 IEVLANMEIVGIRTDVNILNEIDEKIKERINDLEFNIYKDADEQFNINSPKQLGQILFEK 551 Query: 594 QGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTG 653 + +KKT G STS +VLE+L + ILEYR ++K+K+TY D L +IN KTG Sbjct: 552 MDLPVIKKTKTGY-STSADVLEKLRGKSLIIDNILEYRKISKIKNTYIDGLRDVINKKTG 610 Query: 654 RVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRI 713 R+H+ ++Q VT+TGR+SST+PNLQNIP++ EGR IR+A ++ E +V +DYSQIELR+ Sbjct: 611 RIHSRFNQTVTSTGRISSTEPNLQNIPIKTHEGRLIRKALLSSEGSSLVDSDYSQIELRV 670 Query: 714 MAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGL 773 +A LS D ++ AFA+G DIHR TA+EVF P + V+ E R AKA+NFG++YG+S +GL Sbjct: 671 LASLSNDTYMINAFADGLDIHRKTASEVFHTPYDEVSDELRSMAKAVNFGIVYGISDYGL 730 Query: 774 ARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNG 833 ++ LNIPRKEA+ Y+D Y + G+ +YM E+GYVETL RR Y+P++K+ N Sbjct: 731 SQNLNIPRKEAKTYIDNYLGHFQGIKKYMNDIIHVGTEKGYVETLLHRRRYIPELKAKNF 790 Query: 834 ARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDV 893 R+ ER A+N P+QGTAADIIK AM+ V L+ + + ++I+Q+HDELV + ++V Sbjct: 791 NIRSFGERIALNTPIQGTAADIIKIAMVGVYKELKKKNLKAKLILQIHDELVVDAPDEEV 850 Query: 894 DAVAKQIHQLMENCTRLDVPLLVEVGSGEN 923 V + + +M+N + VPL V + +G++ Sbjct: 851 AEVCEIMKDVMDNALIMKVPLSVSMKTGKS 880 >UniRef50_C7HT94 DNA polymerase I n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HT94_9FIRM Length = 893 Score = 568 bits (1463), Expect = e-160, Method: Compositional matrix adjust. Identities = 335/921 (36%), Positives = 526/921 (57%), Gaps = 55/921 (5%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 ++L+DGSS ++RA+ A P LTN+ G T +YG L M + +YKP + V FD K KT Sbjct: 19 VMLIDGSSLIFRAFFALPNLTNADGVMTNGVYGFLTMYFRAVEEYKPDYILVAFDKKTKT 78 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR + FE YK++R P++L Q L ++ ++ + L + G EADD++GT + A++ Sbjct: 79 FRHKEFEDYKANRDKAPNELNYQFGILKDILDSLNVKYLDIDGYEADDIVGTFSTIAKEE 138 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNK-----YGVPPELIIDFLALM 183 G +I TGDKD QLV + + T I EE+ K YG+ P+ +ID LM Sbjct: 139 GLETVIITGDKDYFQLVNDKVVVFLTRKG-ISQMEEITVKSIEDDYGLSPKQLIDVKGLM 197 Query: 184 GDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVA 243 GD SDNIPGV G+GEKTA ++ G ++ LY + I G K LE +K++A Sbjct: 198 GDKSDNIPGVDGIGEKTAIKFIKKYGSMEGLYENLDDIKG------KKTKENLENSKQIA 251 Query: 244 YLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAK 303 +LS ++ TI T+ + + +L+V++P + L F KY F ++ E Sbjct: 252 FLSKKIGTIVTNAPVGMKISELKVKEPDLDSLREKFSKYNFNKFMEKFE----------- 300 Query: 304 PAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDN 363 ++E + S+ + +I+D+ +EK VF F + + + Sbjct: 301 --------DTSEERKDEIEFSYSFSDDFSIIDD---------IEKDGVFYFKSIFEEDNY 343 Query: 364 ISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKY 423 I +N +A + Y+ PD E+ +E K E + KV ++K Sbjct: 344 IHSNAYK--------IAIKTSSSKTYIYNPD----EKFVEKFKKYFEADNIKKVSFDIKE 391 Query: 424 DRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQ 483 D + GI + DTML Y+++ +D+ + ++ +LK++ E++ GKGK++ Sbjct: 392 DIVLFDKLGINISLPYDDTMLMHYLIDPSRSSYDLKTFSQAFLKYEVENEEDLLGKGKSK 451 Query: 484 LTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERN 543 ++ + + G+Y A + ++ L + + +++++ E+ L VL+ +E Sbjct: 452 KSYKDLDSDNLGKYLASIVN-AIEDSLDILTQKLEELSMYDLYKDCEIKLSKVLADMEIT 510 Query: 544 GVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTP 603 G D L +E++L L +LEK +E+AG EFN++S KQL ILFE + +KKT Sbjct: 511 GFICDKNELEKIKDEVSLELGDLEKIIYELAGSEFNINSPKQLSKILFEDLKLPIIKKTK 570 Query: 604 GGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAV 663 G ST+ +VLE+L +P+ + I YR + KLKSTY + L I+ + GR+ +++ Q V Sbjct: 571 TGY-STNAQVLEKLRKKHPIIEKIERYREMYKLKSTYLESLEECID-EDGRIRSTFKQNV 628 Query: 664 TATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGL 723 TATGRLSST+PNLQN+P+R EEGR+IR+AF A + V++ ADYSQIELR++AHL+ DK + Sbjct: 629 TATGRLSSTEPNLQNLPIRTEEGRKIRKAFKADDGKVLIDADYSQIELRVLAHLANDKKM 688 Query: 724 LTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKE 783 AF++ DIH TA+EVF P++ VT QR AKA+NFG+IYG+S +GL++ LNIPRK Sbjct: 689 QEAFSKDIDIHTKTASEVFSTPIDEVTKLQRSEAKAVNFGIIYGISDYGLSQNLNIPRKR 748 Query: 784 AQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAA 843 A++Y++ Y + YP + +YM+ +AKE GYV T+ RR Y+P+I S N R+ ER A Sbjct: 749 AKEYIENYLDTYPEIKKYMKDIVKKAKEDGYVNTIFNRRRYVPEINSKNFNVRSFGERVA 808 Query: 844 INAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQL 903 +N P+QGTAADIIK AMI LQ + ++++Q+HDE++ E K D++ + + Sbjct: 809 LNTPIQGTAADIIKFAMINSYQNLQKAKIDAKIVLQIHDEIIIEASKKDLEKAKEILKSS 868 Query: 904 MENCTRLDVPLLVEVGSGENW 924 M++ L VPLLV++ SGE+ Sbjct: 869 MQDAVDLKVPLLVDIDSGESM 889 >UniRef50_A1QZY0 DNA polymerase I n=1 Tax=Borrelia turicatae 91E135 RepID=A1QZY0_BORT9 Length = 919 Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust. Identities = 341/945 (36%), Positives = 535/945 (56%), Gaps = 55/945 (5%) Query: 9 LILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 + L+D + ++R YH PLTN GE A G L +I + P + V FD++ Sbjct: 4 IYLIDALNIIFRNYHVMKNNPLTNKKGENVNAFIGFFKTLFFIIKEKNPENLIVTFDSET 63 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 +TFR + + YK+ R PD+L QI + + +P+ + G EADD+I + A++AE Sbjct: 64 QTFRQQKYPSYKATRDAPPDNLIPQIYWIKESLIKANIPMFEIQGYEADDLIASFAKKAE 123 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNTI--LGPEEVVNKYGVPPELIIDFLALMG 184 I + DKD+ QL++ ++ ++ + + V+ K+GV I D+L+++G Sbjct: 124 INNYLTYIISPDKDLLQLMSAKTKILKIENSSFVEMDNDYVMKKFGVNKSQIKDYLSIVG 183 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 D SDNIPG+ G+GEK A LL L+ +Y + I +R L + +E A+ Sbjct: 184 DRSDNIPGIKGIGEKGAAKLLNEFQTLNGIYDNLDSINN-KYREI------LLKERENAF 236 Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304 LSY+L ++ D+EL E+ +++ E++L LF++Y T +++ K + K Sbjct: 237 LSYELISLVEDLELP-ALEKFKLEN-LKEDILLLFEEYS---ATTLIKSYKTILKKRYAT 291 Query: 305 AAKPQ---ETSVADEAPEVTATVISYDN-----------YVTILDEETLKAWIAKLEKAP 350 + ET++ E+ T S+ N Y TIL +E L I KL++A Sbjct: 292 NQTQKSLFETNINQTDTEILQTTTSHSNALKTIQEENIKYETILKKEQLDLLIEKLKQAN 351 Query: 351 VFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLE 410 A DTET SL+ A ++G+S + + + YIP+ I + ++ + Sbjct: 352 YVAIDTETTSLNVHEAQIIGISVSFKEFESYYIPIE---TKEKKTIEKAYIIQKFNEFFK 408 Query: 411 DEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKT 470 + L +GQN K+D IL + + FDTM+ +Y+++ + +D LAE++L HK Sbjct: 409 AQPKL-IGQNYKFDYKILKKHEFNVIPPYFDTMIAAYVIDP-NTKVSLDFLAEKYLMHKN 466 Query: 471 ITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIE 530 I +EEI + T I LE YAAEDAD+T +L K++ K N+ +IE Sbjct: 467 IRYEEIVAQNG---TLKDIPLEMVSNYAAEDADITFRL-FKIFTKKLKEDNLENLMTDIE 522 Query: 531 MPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTIL 590 MP V++ +E NG+ +D L + EL L +E + + G EFNL+STKQL T+L Sbjct: 523 MPFSNVITEMEENGIYLDKDYLRQYGYELDKELKLIENEIIKSIGIEFNLNSTKQLHTVL 582 Query: 591 FEK------QGIKPLKKTPGGAPSTSEEVLEELALDY-PLPKVILEYRGLAKLKSTYTDK 643 FE+ Q +K ST +VLE + + +PK+I +YR +AKLK+TYTD Sbjct: 583 FERLNLVLPQNVK--------QDSTDIKVLETIKEQHESIPKLI-QYRQIAKLKNTYTDN 633 Query: 644 LPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVS 703 L +N KT ++HT++ Q TATGR+SST PNLQNIP+++E+GR+IR+AF + + +S Sbjct: 634 LIEFVNEKTNKIHTNFIQTKTATGRISSTSPNLQNIPIKDEKGRKIREAFKPEKGNIFIS 693 Query: 704 ADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFG 763 ADYSQIEL I+AHLS D+ L+ AF KDIH TA+++F + E VTS RR AK+INFG Sbjct: 694 ADYSQIELVILAHLSEDESLIEAFKNKKDIHIKTASQLFKVDEEKVTSSMRRIAKSINFG 753 Query: 764 LIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRL 823 +IY MSAF L+++L+I R+EAQK++D YF Y + +++ ++ GY ETL RR Sbjct: 754 IIYRMSAFRLSKELSIKREEAQKFIDSYFNLYSKIKTFIQNQIDFVRKNGYSETLLKRRR 813 Query: 824 YLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDE 883 Y+ +I S N + R+ AER AIN+ +QG+A+DI+K AMI V L+++ + ++++QVHDE Sbjct: 814 YIKEINSQNYSERSGAERIAINSTIQGSASDIMKIAMIKVYNELKSKNLKSKILLQVHDE 873 Query: 884 LVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 ++ E + + + V K I +MEN L +PL V + +G++W + H Sbjct: 874 MLIESPEQECEEVNKIIKTMMENAYPLKIPLKVNIETGKSWGEIH 918 >UniRef50_Q04957 DNA polymerase I n=117 Tax=Firmicutes RepID=DPO1_BACCA Length = 877 Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust. Identities = 363/925 (39%), Positives = 534/925 (57%), Gaps = 59/925 (6%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 + L+L+DGSS YRA+ A P L N G T A+YG ML ++ + +PTH V FDA Sbjct: 2 KKKLVLIDGSSVAYRAFFALPLLHNDKGIHTNAVYGFTMMLNKILAEEEPTHMLVAFDAG 61 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 TFR E F+ YK R P +L Q L +++A +P + EADD+IGTLA A Sbjct: 62 KTTFRHEAFQEYKGGRQQTPPELSEQFPLLRELLRAYRIPAYELENYEADDIIGTLAARA 121 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI----LGPEEVVNKYGVPPELIIDFLA 181 E+ G V + +GD+D+ QL +P++T+ T PE V KYG+ PE I+D Sbjct: 122 EQEGFEVKVISGDRDLTQLASPHVTVDITKKGITDIEPYTPEAVREKYGLTPEQIVDLKG 181 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGD SDNIPGVPG+GEKTA LL+ G ++ + A ++I G + + L Q++E Sbjct: 182 LMGDKSDNIPGVPGIGEKTAVKLLRQFGTVENVLASIDEIKG------EKLKETLRQHRE 235 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 +A LS +LA I+ D +EL+ + + Q E+++ LFK+ F+ + +E+ ++ Sbjct: 236 MALLSKKLAAIRRDAPVELSLDDIAYQGEDREKVVALFKELGFQSFLEKMESP---SSEE 292 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 KP AK T +AD + EE L +KA + E + Sbjct: 293 EKPLAKMAFT-LADR-----------------VTEEMLA------DKAALVVEVVEENYH 328 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 D A +VG++ E G P L P ++ L DE K + Sbjct: 329 D---APIVGIAVVNEHGRFFLRP--ETALADPQFVA----------WLGDETKKKSMFDS 373 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 K L GIEL G++FD +L +Y+L+ G D+ + A+ E + GKG Sbjct: 374 KRAAVALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVAAAAKMKQYEAVRPDEAVYGKGA 433 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 + ++ L E + A L +L++++ + E +E PL +L+ +E Sbjct: 434 KRAVPDEPVLAE---HLVRKAAAIWALERPFLDELRRNEQDRLLVE-LEQPLSSILAEME 489 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 GVK+D K L EEL +L +E++ +E+AG+EFN++S KQL ILFEK + LKK Sbjct: 490 FAGVKVDTKRLEQMGEELAEQLRTVEQRIYELAGQEFNINSPKQLGVILFEKLQLPVLKK 549 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILE-YRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 + G STS +VLE+LA + + + IL+ YR L KL+STY + L ++ P T +VHT ++ Sbjct: 550 SKTGY-STSADVLEKLAPYHEIVENILQHYRQLGKLQSTYIEGLLKVVRPDTKKVHTIFN 608 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE-DYVIVSADYSQIELRIMAHLSR 719 QA+T TGRLSST+PNLQNIP+R EEGR+IRQAF+ E D++I +ADYSQIELR++AH++ Sbjct: 609 QALTQTGRLSSTEPNLQNIPIRLEEGRKIRQAFVPSESDWLIFAADYSQIELRVLAHIAE 668 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 D L+ AF DIH TA ++F + + VT RR AKA+NFG++YG+S +GLA+ LNI Sbjct: 669 DDNLMEAFRRDLDIHTKTAMDIFQVSEDEVTPNMRRQAKAVNFGIVYGISDYGLAQNLNI 728 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 RKEA ++++ YFE +PGV YME +AK++GYV TL RR YLPDI S N R+ A Sbjct: 729 SRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFA 788 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 ER A+N P+QG+AADIIK+AMI ++A L+ E+ + R+++QVHDEL+ E K++++ + + Sbjct: 789 ERMAMNTPIQGSAADIIKKAMIDLNARLKEERLQARLLLQVHDELILEAPKEEMERLCRL 848 Query: 900 IHQLMENCTRLDVPLLVEVGSGENW 924 + ++ME L VPL V+ G W Sbjct: 849 VPEVMEQAVTLRVPLKVDYHYGSTW 873 >UniRef50_Q59156 DNA polymerase I n=6 Tax=Clostridia RepID=DPO1_ANATD Length = 850 Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust. Identities = 341/927 (36%), Positives = 527/927 (56%), Gaps = 94/927 (10%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 L++ DG+S LYRA+ A P LT S PT A+YG +N++ + Q KP + AV FD +G+ Sbjct: 3 LVIFDGNSILYRAFFALPELTTSNNIPTNAIYGFVNVILKYLEQEKPDYVAVAFDKRGRE 62 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 R +E YK++R PMPD+L+ QI + ++ A +P++ G EADDVIG+L + + Sbjct: 63 ARKSEYEEYKANRKPMPDNLQVQIPYVREILYAFNIPIIEFEGYEADDVIGSLVNQFKNT 122 Query: 129 GRPVLISTGDKDMAQLVTPNI------TLINTMTNTILGPEEVVNKYGVPPELIIDFLAL 182 G ++I TGD+D QL+ N+ T + + E V KYGV + D+ AL Sbjct: 123 GLDIVIITGDRDTLQLLDKNVVVKIVSTKFDKTVEDLYTVENVKEKYGVWANQVPDYKAL 182 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 +GD SDNIPGV G+GEK+AQ LL+ L+ +Y +KI ++ KLE K++ Sbjct: 183 VGDQSDNIPGVKGIGEKSAQKLLEEYSSLEEIYQNLDKIKS-------SIREKLEAGKDM 235 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A+LS +LATI D+ L + E L ++ E L + + EFK + + +Q + Sbjct: 236 AFLSKRLATIVCDLPLNVKLEDLRTKEWNKERLYEILVQLEFKSIIKRLGLSEVVQFEFV 295 Query: 303 KPAAKPQETSVAD-EAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 + Q T + D E E+ + ++ + + + + EK + +D E++++ Sbjct: 296 Q-----QRTDIPDVEQKELES--------ISQIRSKEIPLMFVQGEKC-FYLYDQESNTV 341 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 I++N + + ++ + + +D + Q++ LED +K +++ Sbjct: 342 -FITSNKLLIEEILKSDT---VKIMYDLKNIFHQLN-----------LEDTNNIKNCEDV 386 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 M+ SY+L+S +++++L +L T E K K Sbjct: 387 ---------------------MIASYVLDSTRSSYELETLFVSYLN----TDIEAVKKDK 421 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLN----VFENIEMPLVPVL 537 V++ L ++W +L + LN ++ENIE PL+PVL Sbjct: 422 KI--------------------VSVVLLKRLWDELLRLID-LNSCQFLYENIERPLIPVL 460 Query: 538 SRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIK 597 +E+ G K+D L +++E+ ++ +LE + ++IAGE FN++S KQL ILFEK + Sbjct: 461 YEMEKTGFKVDRDALIQYTKEIENKILKLETQIYQIAGEWFNINSPKQLSYILFEKLKLP 520 Query: 598 PLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHT 657 +KKT G ST EVLEEL + + +IL+YR K+ +TY L INP +GRVHT Sbjct: 521 VIKKTKTGY-STDAEVLEELFDKHEIVPLILDYRMYTKILTTYCQGLLQAINPSSGRVHT 579 Query: 658 SYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHL 717 ++ Q TATGRL+S+DPNLQNIPV+ +EG+ IR+ F+ +V++ ADYSQIELRI+AH+ Sbjct: 580 TFIQTGTATGRLASSDPNLQNIPVKYDEGKLIRKVFVPEGGHVLIDADYSQIELRILAHI 639 Query: 718 SRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQL 777 S D+ L++AF DIH TAAEVFG+ + VT E R AKA+NFG++YG+S +GLAR + Sbjct: 640 SEDERLISAFKNNVDIHSQTAAEVFGVDIADVTPEMRSQAKAVNFGIVYGISDYGLARDI 699 Query: 778 NIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRA 837 I RKEA ++++ YFERYP V EY++ T A++ G+V TL R+ Y+ DIKS+N R Sbjct: 700 KISRKEAAEFINKYFERYPKVKEYLDNTVKFARDNGFVLTLFNRKRYIKDIKSTNRNLRG 759 Query: 838 AAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVA 897 AER A+N+P+QG+AADI+K AMI V L+ + ++I+QVHDEL+ E ++ D V Sbjct: 760 YAERIAMNSPIQGSAADIMKLAMIKVYQKLKENNLKSKIILQVHDELLIEAPYEEKDIVK 819 Query: 898 KQIHQLMENCTRLDVPLLVEVGSGENW 924 + + + MEN L VPL+VEV G NW Sbjct: 820 EIVKREMENAVALKVPLVVEVKEGLNW 846 >UniRef50_Q9RAA9 DNA polymerase I n=2 Tax=spotted fever group RepID=DPO1_RICFE Length = 922 Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust. Identities = 344/958 (35%), Positives = 529/958 (55%), Gaps = 74/958 (7%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 +N L+L+DG +++RAY+A PLT+ GEP GA+YG +ML L+ +KP H AVVFD+ Sbjct: 4 KNTLLLIDGYGFVFRAYYAQQPLTSPKGEPVGALYGFASMLLKLLSDFKPKHVAVVFDSG 63 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 GK FR ++ YK++RPP P+DL Q+ + + + P+L +G EADD+I T A + Sbjct: 64 GKNFRHHIYPEYKANRPPPPEDLVVQLPLVRDVASNLNFPILEKNGYEADDIIATFAAKT 123 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185 G V++ + DKD+ QL+ NI + + + + ++VV K+G + + + +AL+GD Sbjct: 124 AALGEDVVVISSDKDLLQLMGENIKIYDPLKGKYITEDDVVKKFGTTSDKLREVMALIGD 183 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 SDNIPGVP +G KTA +L+ G ++ ++ E+++ L R L+ +KE A + Sbjct: 184 RSDNIPGVPSIGPKTASSLITQFGSVENIFNSLEQVSSLKQRET------LQNSKEAALI 237 Query: 246 SYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPA 305 S+QL + ++V+L+ LE P +++L G ++Y FK E ++ K Sbjct: 238 SWQLIGLDSNVDLDFQLNNLEWSPPNSDKLTGFLQEYGFKSLYKRAENLFDIKINDHKEI 297 Query: 306 AKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNIS 365 + + T EA E++ + L + K EK +F DN++ Sbjct: 298 VENKVT----EAKEIS-------------NASELADFAKKAEKIGIFGIYLLQHKGDNVA 340 Query: 366 ANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDR 425 + LS + + +HD + + + +++ LL D+ K+ +LK Sbjct: 341 ---LILSLQNQSYIIKISNTSHDLFSYNTKNNNDWFSDIIFNLLTDKSIRKITYSLKPLL 397 Query: 426 GILANYGIELRGIAFDTMLESYILNS-------------VAGRH------------DMDS 460 A E+ I D L Y L++ RH D ++ Sbjct: 398 KFYAEQSHEITAIE-DLELMQYALSAGLSQKNLFEEALKEDNRHLSKPAYREEFKGDTEA 456 Query: 461 LAERWLKHKTITFEEIAGKGKN-----QLTFNQIA--LEEAGRYAAEDADVTLQLHLKMW 513 LA K + E A G + F +++ + E+ R AE + Q L++ Sbjct: 457 LATAAYK----SVREDASTGSTSKLPLETKFGKMSNVINESARIVAEFTSLYKQNILEL- 511 Query: 514 PDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEI 573 K ++ NI++P+ +L ++E+ G+K+D L+ S E + +LE++ + Sbjct: 512 ----KDNKAFRLYSNIDLPICFILDKMEKIGIKVDANYLNQLSAEFGAEILKLEEEIFAL 567 Query: 574 AGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPS--TSEEVLEELA-LDYPLPKVILEY 630 +G +FN+ S KQL ILFEK + P K A S T E+LE+L+ Y + ++L + Sbjct: 568 SGTKFNIGSPKQLGEILFEKMQL-PFGKASAKASSYSTGAEILEKLSEHGYNIADLLLRW 626 Query: 631 RGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIR 690 R L KLK+TYTD LP I+ T RVHT++ Q T TGRLSS +PNLQN+P+R+ EG +IR Sbjct: 627 RQLTKLKNTYTDSLPKQIDNITHRVHTTFLQTSTTTGRLSSQEPNLQNVPIRSSEGNKIR 686 Query: 691 QAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVT 750 QAFIA E Y ++SADYSQIELRI++H++ L AF DIH TA ++F L +T Sbjct: 687 QAFIAEEGYKLISADYSQIELRILSHIANIDALKQAFINKDDIHTQTACQIFNLQKHELT 746 Query: 751 SEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAK 810 SE RR AKAINFG+IYG+SAFGLA+QLN+ EA +Y+ YF Y GV EYME+T+A A Sbjct: 747 SEHRRKAKAINFGIIYGISAFGLAKQLNVSNGEASEYIKKYFAEYKGVQEYMEQTKAFAS 806 Query: 811 EQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAE 870 GYV GR+ ++P I + + AERAAINAP+QGT ADIIK AMI +D ++ Sbjct: 807 SNGYVINFFGRKCFVPLI--HDKKLKQFAERAAINAPIQGTNADIIKIAMINLDQEIEKN 864 Query: 871 QPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 + R+++Q+HDEL+FEV +D+V+ V I ++MEN T +DVP++ E+ G NW + H Sbjct: 865 NLKTRLVLQIHDELLFEVPEDEVELVTPIIKKIMENSTNMDVPIITEIRVGNNWMEIH 922 >UniRef50_A6NVK8 DNA polymerase I n=2 Tax=Bacteria RepID=A6NVK8_9BACE Length = 889 Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust. Identities = 366/953 (38%), Positives = 527/953 (55%), Gaps = 102/953 (10%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 L+++DG+S + RA++ LT G+PT A+YG L +L+ L+ + KP FD K T Sbjct: 3 LMVIDGNSIVNRAFYGVHMLTTRDGQPTNAVYGFLTILQKLVDEEKPDALCCTFDRKAPT 62 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR +E YK+ R MPD+L +Q+ L ++ AM +P + G EADD+IGT++ + A Sbjct: 63 FRHLAYEGYKAQRKGMPDELASQMPILKEVLDAMNIPRYEMDGWEADDLIGTISVKDAAA 122 Query: 129 GRPVLISTGDKDMAQLVT--PNITLINT----MTNTILGPEEVVNKYGVPPELIIDFLAL 182 G ++ TGDKD QLVT + L++T T + P+ YG P IID AL Sbjct: 123 GWDTVVVTGDKDSLQLVTDRTRVKLVSTRMGQTTTKEMTPDTFRETYGFDPIHIIDLKAL 182 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 MGD+SDNIPGV GVGEKTA L+Q ++ +YA+ +K+ + KL + +E Sbjct: 183 MGDASDNIPGVKGVGEKTAMDLIQRYQSVEAIYADLDKV-----EAKPAVLKKLTEGREQ 237 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A +SY LATI+TD L+ E ++ EL LF K EF K + G Sbjct: 238 AMMSYDLATIRTDAPLDFKPEDAARKEVNQAELYQLFLKLEFS---------KLIDKMGL 288 Query: 303 KPAAKPQ-ETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 K PQ E + E VT T S + EE L W + E V A Sbjct: 289 KA---PQGEAAAVTEEQAVTGTCESEEVTDLTRAEELLAIWRGQ-ESVDVLAL------- 337 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERA-------LELLKPLLEDEKA 414 P + A VA ++ ++ SR RA LE +L+ A Sbjct: 338 ---------------PDLNA---VAVEWWESE---SRSRAAVLRADKLEGYNGVLKALFA 376 Query: 415 LKVGQNLKYDRGILANY---GIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTI 471 + +N + +L+ G+E G FDT + +Y+L G ++++ L I Sbjct: 377 ADIKKNTHDVKTLLSRLLEEGVEGDGFVFDTAIAAYLLAPTDGSYELEKLG--------I 428 Query: 472 TFEEIAGKGKNQLTFNQIALEEAGRYAAEDA-----DVTLQL-----HLKMWPDLQKHKG 521 T+ FNQ + Y A DA D T L H + L+K Sbjct: 429 TY------------FNQEFAKAKDTYLAPDAFSPLADQTAVLGGMLSHCALIGALKKVLA 476 Query: 522 PL-------NVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIA 574 P ++ +IE+PL VLS +E G+ +D K L + L R+A + + +E+A Sbjct: 477 PRLEELGMHQLYYDIELPLCQVLSAMEHAGMLVDRKALSEFGDMLDERIAADQAEIYELA 536 Query: 575 GEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLA 634 GE FN++ST+QL ILF+K G+ P+KKT G ST+ EVLE+L +P+ ILEYR Sbjct: 537 GETFNINSTQQLGKILFDKLGLPPVKKTKTGY-STNAEVLEKLRGQHPIIDKILEYRQYT 595 Query: 635 KLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFI 694 KLKSTY D L +I P GR+HTS+ VTATGRLSST+PNLQNIPVR E G +R+ F+ Sbjct: 596 KLKSTYVDGLGKVIAPD-GRIHTSFQNTVTATGRLSSTEPNLQNIPVRTELGAELRKMFV 654 Query: 695 APEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQR 754 AP V+V ADYSQIELR++AH++ D+ ++ AF G+DIH TAA+VFG+P++ VT R Sbjct: 655 APAGKVLVDADYSQIELRLLAHIAGDEHMIEAFRTGEDIHTVTAAQVFGVPVDQVTKHMR 714 Query: 755 RSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGY 814 SAKA+NFG++YG+SAF L++ + +P EA++Y++ YF R+ GV YM +AK GY Sbjct: 715 SSAKAVNFGIVYGISAFSLSQDIGVPTYEAKEYIEKYFARFSGVHAYMTDVVNRAKTDGY 774 Query: 815 VETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRV 874 V TL GRR +LP++KSSN R+ ER A+N P+QGTAADI+K AM+ V + L+ E + Sbjct: 775 VSTLFGRRRWLPELKSSNFNTRSFGERVALNMPIQGTAADIMKLAMLHVHSRLREEGLQA 834 Query: 875 RMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 R+I+QVHDEL+ E +++ + V + + ME+ +L VPL+ + +G +W +A Sbjct: 835 RLILQVHDELIVECPEEEAETVKALLSREMESVAQLAVPLIADAAAGRSWAEA 887 >UniRef50_B1WPN5 DNA polymerase I n=13 Tax=Bacteria RepID=B1WPN5_CYAA5 Length = 970 Score = 565 bits (1456), Expect = e-159, Method: Compositional matrix adjust. Identities = 368/978 (37%), Positives = 536/978 (54%), Gaps = 77/978 (7%) Query: 9 LILVDGSSYLYRAYHAFP-----PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 L+L+DG S +RAY+AF PL S G PT +G LN L I P + A+ FD Sbjct: 10 LMLIDGHSLAFRAYYAFAKARKGPLRTSTGIPTSVCFGFLNSLIQAIKLENPQYIAIAFD 69 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 +K TFR E +YK+ R P+D I L +++A+ + ++ G EADDV+GT+A Sbjct: 70 SKEPTFRHEADVNYKADRKETPEDFIPDILNLQRLLEALNITIITAPGYEADDVLGTVAT 129 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPN--ITLINTMTNTI----------LGPEEVVNKYGV 171 + + G V I +GD+D+ QLV + ++++ N + E V K G+ Sbjct: 130 KGSQEGYRVKIVSGDRDLFQLVNDDNHLSVLYLERNAVKSSSGEGYTEFNVEAVTEKMGI 189 Query: 172 PPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKT 231 P +ID+ AL GD SDNIPGV G+GEKTA LL G L+ +Y E+I G + + Sbjct: 190 KPTQVIDYKALCGDKSDNIPGVRGIGEKTAVKLLSEYGTLEAVYNNIEEIKGANQK---- 245 Query: 232 MAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADV 291 KL++ K+ A S LA I TD LE E+ E++ + + + ++ E K++ ++ Sbjct: 246 ---KLKEGKKEAEHSQYLAEIVTDAPLEFQIERCELKGFNFDAVKPILEELELKKFIKEI 302 Query: 292 E-------AGKWLQAKGAKPAAKPQETSVADEAPEVTATVI--------SYDNYVTILDE 336 L+ + + S+ D+ PE V S N I + Sbjct: 303 NQLQEHFGGNITLEVHEKINKNETHQLSIFDDVPEKVEPVNNIKEETKESLINPQIITEI 362 Query: 337 ETLKAWIAKLE-----KAPVFAFDTETDSLDNISANLVGL--SFAIEPGVAAYIPVAHDY 389 E L + KL PV A+DTET L+ ANLVG+ + P AYIP+ H Sbjct: 363 EQLHELVDKLSTFTNANIPV-AWDTETTDLNPRQANLVGIGCCWGNNPTDIAYIPIGHK- 420 Query: 390 LDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYIL 449 Q+ +E+ L+ L+ +LE KV QN K+DR I + I L G+ FDTML SY+L Sbjct: 421 --QGKQLKKEQVLDSLRTILESSDYPKVFQNTKFDRLIFKHQAINLDGVVFDTMLASYVL 478 Query: 450 NSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLH 509 + H + L E++L+ T + G K Q T + +E+ Y DA T L Sbjct: 479 HP-EKSHKLSELCEQYLEGITCQNYDELGISKKQ-TIADLDIEKVAEYCGMDAYGTFLLV 536 Query: 510 LKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKK 569 + +LQ+ + +E PL VLS +E G+ ID + L S+EL L+ LEKK Sbjct: 537 EPLKNELQQVPTLEQLLLEVEQPLEAVLSIMEDTGILIDTEYLGKLSKELEQELSSLEKK 596 Query: 570 AHEIAGEEFNLSSTKQLQTILFEKQGI--KPLKKTPGGAPSTSEEVLEELALDYPLPKVI 627 A++ A E+FNL S KQL ILFEK + K +KT G ST LE+L D+P+ I Sbjct: 597 AYDAAEEKFNLGSPKQLGEILFEKLELNRKKSRKTKTGY-STDHATLEKLKGDHPIIDYI 655 Query: 628 LEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGR 687 LEYR L+KLKSTY D LP ++N KT R+HT+++Q+VTATGRLSS++PNLQNIP+R E R Sbjct: 656 LEYRTLSKLKSTYIDALPELVNKKTKRIHTNFNQSVTATGRLSSSNPNLQNIPIRTEFSR 715 Query: 688 RIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLE 747 +IRQAFI +D+++VSADYSQIELRI+AHLS++ LL A+ +D+H TA +F E Sbjct: 716 QIRQAFIPQKDWLLVSADYSQIELRILAHLSQESVLLNAYQNAEDVHTVTAKLLF--EKE 773 Query: 748 TVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRA 807 +T ++R K INFG+IYGM + AR+ + E +++++ Y +RY V EY+E + Sbjct: 774 EITPQERNLGKTINFGVIYGMGSQRFAREAGVSATEGKEFINKYRQRYAKVFEYLENMKK 833 Query: 808 QAKEQGYVETLDGRRLYLP-----------------DIKSSN-GARRAAAERAAINAPMQ 849 +A GYV T+ GRR Y D+ N + RAA NAP+Q Sbjct: 834 EAIANGYVTTILGRRRYFNFFDDNLYRFRGHDPQTIDLNKLNINYNDSQLLRAAANAPIQ 893 Query: 850 GTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTR 909 G++ADIIK AM+ + L Q +++QVHDELVFE+ + + + + +I + MEN + Sbjct: 894 GSSADIIKIAMVKIQEILNYYQ--ANLLLQVHDELVFEIPEKEWEELNHKIKETMENAVK 951 Query: 910 LDVPLLVEVGSGENWDQA 927 L +PL+VE+ +G+NW +A Sbjct: 952 LTIPLVVEIHAGKNWMEA 969 >UniRef50_D1AZX7 DNA polymerase I n=3 Tax=Campylobacterales RepID=D1AZX7_SULD5 Length = 885 Score = 565 bits (1456), Expect = e-159, Method: Compositional matrix adjust. Identities = 347/926 (37%), Positives = 523/926 (56%), Gaps = 54/926 (5%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 L ++D + +R Y+A P L NS G PTG + G N + ++ ++ + D+KGK Sbjct: 4 LTIIDTFGFFFRNYYALPQLRNSQGFPTGLLTGFANFIYAIKNEHDTDYVMFALDSKGKN 63 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR EL +YK++RP P++L+ Q+ + ++ MG + G EADDVI + + A++ Sbjct: 64 FRHELDPNYKANRPEAPEELKKQLPVAISWIEKMGFKCYSEEGFEADDVIASAVKFAKRH 123 Query: 129 GRPVLISTGDKDMAQLVTPN-ITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSS 187 G V I T DKD+ QL+ + + + M + E+ K+GV P+ I ++L+L+GD++ Sbjct: 124 GIKVRIVTHDKDLYQLIDDGRVVIYDPMKKIEIDSEKCFEKFGVYPDKINEYLSLVGDTA 183 Query: 188 DNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSY 247 DNIPGV G+G K A+ LL G ++ +YA E+IA +K+M LE+ +E A+LS Sbjct: 184 DNIPGVKGIGPKGAKKLLDDFGSVENIYANLERIANPR---SKSM---LEEGRESAFLSK 237 Query: 248 QLATIKTDVELELTCEQLEVQQPAAEELLGL---FKKYEFKRWTADVEAGKWLQAKGAKP 304 QL + + + T E P L+ + +KYE + + V + L K Sbjct: 238 QLVRLDDSLNIADTFEAFYF--PCDNPLVNIADELEKYELRHMLSRVR-NEALHVK---- 290 Query: 305 AAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNI 364 EAP T I D D + L I +E+ AFDTET++LD Sbjct: 291 ---------IKEAPSNTFRAILVD------DAKILFNVIEGIEEGSWVAFDTETNALDAY 335 Query: 365 SANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYD 424 +A +VG SFA+ A Y+P+AH YL +QI E A E LK L K VGQNLKYD Sbjct: 336 NAKIVGFSFALNEHEAYYVPLAHHYLGVGEQIGMEEAKEALKKLF---KHKIVGQNLKYD 392 Query: 425 RGILAN-YGIELRGIAFDTMLESYILN--SVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 ++ N +G+ L DTML +++LN S G +D+LA+R+ H + F+++ K + Sbjct: 393 LAVIENNFGLRLSSSYADTMLMAWLLNPESNVG---LDTLAKRFFNHDMVKFKDVVSKNE 449 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 N F+ + L++A YA+EDA +TL+L+ K+ L+ L + + +E P + L R+E Sbjct: 450 N---FSHVPLDKACEYASEDAWMTLKLYNKLHDMLEPR--LLEIAKEVEFPFILTLMRME 504 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 + G+KID + + L+ + + +FNL+ST+QL T+LFE+ G+ P+KK Sbjct: 505 KEGIKIDGAYFEALLKRTDGAIDALKHEIFTLCDAQFNLNSTQQLGTVLFEQLGLPPVKK 564 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKL-PLMINPKTGRVHTSYH 660 T G ST E VL EL +P ILEYR L KL+STY + L L GRVHTS+ Sbjct: 565 TKTGY-STDENVLNELLDKHPSIAKILEYRELYKLRSTYIEPLLKLSKESPLGRVHTSFI 623 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRD 720 Q T+TGRLSS DPNLQNIPV+ GR +R F+A E V++ DYSQIELR++AH S D Sbjct: 624 QTGTSTGRLSSKDPNLQNIPVKTALGREVRGGFVAKEGCVLIGIDYSQIELRLLAHFSND 683 Query: 721 KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 + ++ AF +GKDIH TA ++FG E + +R AK+INFGL+YGM L+ L I Sbjct: 684 EAMVKAFRDGKDIHYETALKLFG---EQEAASKRSVAKSINFGLLYGMGPKRLSETLGIS 740 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 EA++Y++ YF +P + Y+ QAK GYVETL GR+ + D + +N + A Sbjct: 741 MAEAKRYIESYFATFPTIKAYVMEVAEQAKTTGYVETLLGRKRFF-DFEHANAMQYAGYL 799 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 R A+N QG+AAD+IK +M + A L ++ ++++Q+HDEL+FEV + + A + Sbjct: 800 REAVNTVFQGSAADLIKLSMNKIMATLIHDE--AKLLLQIHDELIFEVVESQAQSFALEA 857 Query: 901 HQLMENCTRLDVPLLVEVGSGENWDQ 926 ++ME L +PL V + G+NW + Sbjct: 858 QKVMEEIYALRIPLKVSIAMGKNWGE 883 >UniRef50_Q1RH76 DNA polymerase I n=18 Tax=Rickettsia RepID=DPO1_RICBR Length = 871 Score = 565 bits (1455), Expect = e-159, Method: Compositional matrix adjust. Identities = 333/931 (35%), Positives = 525/931 (56%), Gaps = 71/931 (7%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 +N L+L+DG +++RAY+A PLT+ GEP GA+YG +ML L+ +KP HAAVVFD+ Sbjct: 4 KNTLLLIDGYGFVFRAYYAQQPLTSPKGEPVGALYGFTSMLLKLLNDFKPKHAAVVFDSG 63 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 GK FR E++ YK++RPP P+DL AQ+ + + + + P+L +G EADD+I T A + Sbjct: 64 GKNFRHEIYPEYKANRPPPPEDLIAQLPLVRDVARNLNFPILEKNGFEADDIIATFAAKT 123 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185 G V++ + DKD+ QL+ N+ + + + + + VV K+GV + + + +AL+GD Sbjct: 124 ASIGEEVVVISSDKDLLQLMNDNVKIYDPLKAKYITEDNVVEKFGVTSDKLREVMALIGD 183 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 SDNIPGVP +G KTA +L+ G ++ ++ E+++ + R L+ +KE A + Sbjct: 184 KSDNIPGVPSIGPKTASSLITQFGTVENIFNSLEQVSSIKQRET------LQNSKEAALI 237 Query: 246 SYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPA 305 S+QL + +V+++ + LE P +L +Y FK E ++ K Sbjct: 238 SWQLIGLDYNVDMDFKLDALEWSPPDHNKLTEFLHEYGFKSLYKRAENLFDIKISEHKEV 297 Query: 306 AKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNIS 365 + + + D I ++ L+A+ K +K +F L N Sbjct: 298 IEEKAVEIKD-----------------ISNKAELEAFAEKAKKVGIFGIYI----LQNKG 336 Query: 366 ANLVGLSFAIEPGVAAYI----PVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 AN+ +F + AYI A++ + E +++ LL D+ K+ +L Sbjct: 337 ANI---AFILSLKNQAYIIKISNEANNLFTYNSKADNEWFTDIIFNLLTDQSIKKITYSL 393 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 K A+ ++ I D L +Y L++ + ++ E+ Sbjct: 394 KPLLKFYASRAQQITAIE-DLELMNYALSAGLPQKNLFEAVEK----------------- 435 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 + +EEA + D+ Q L++ K +++ I++P+ V+ ++E Sbjct: 436 ------EATIEEAAKIVVGFIDLYQQTILEL-----KDNKAFRIYKEIDLPVCFVIDKME 484 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 + G+K+D L+ S E + +LE++ ++G +FN+ S KQL ILFEK + P K Sbjct: 485 KAGIKVDANYLNQLSSEFGAEILKLEEEIFVLSGMKFNIGSPKQLGEILFEKMQL-PFGK 543 Query: 602 TPGGAPS--TSEEVLEELA-LDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTS 658 T A S T ++LE+L+ YP+ ++L +R L KLK+TYTD LP I+ T R+HT+ Sbjct: 544 TSAKANSYSTGADILEKLSEQGYPIADLLLRWRQLTKLKNTYTDSLPKQIDNITRRIHTT 603 Query: 659 YHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLS 718 + Q T TGRLSS +PNLQN+P+R+ EG +IRQAF+A + Y ++SADYSQIELRI++H++ Sbjct: 604 FLQTSTTTGRLSSQEPNLQNVPIRSGEGNKIRQAFVAEQGYKLISADYSQIELRILSHIA 663 Query: 719 RDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLN 778 K L AF DIH TA ++F L E +TSE RR AKAINFG+IYG+SAFGLA+QLN Sbjct: 664 DIKALKQAFINKDDIHTQTACQIFNLQKEELTSEHRRKAKAINFGIIYGISAFGLAKQLN 723 Query: 779 IPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGAR-RA 837 + EA +Y+ YF Y GV EYME T++ A+ GYV GR+ ++P I N R + Sbjct: 724 VSNTEAAEYIKKYFAEYKGVQEYMEATKSFAQANGYVTDFFGRKCFVPLI---NDKRLKQ 780 Query: 838 AAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVA 897 AERAAINAP+QGT ADIIK AM +D ++ + + R+++Q+HDEL+FE D+++ + Sbjct: 781 FAERAAINAPIQGTNADIIKIAMTLLDREIEKRKLKTRLVLQIHDELLFEAPIDEIETIM 840 Query: 898 KQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 I Q+MEN T +DVP++ E+ +G NW + H Sbjct: 841 PIIKQIMENSTNMDVPIITEIRAGNNWMEIH 871 >UniRef50_B9YEU0 DNA polymerase I n=2 Tax=Cyanobacteria RepID=B9YEU0_ANAAZ Length = 982 Score = 564 bits (1454), Expect = e-159, Method: Compositional matrix adjust. Identities = 381/985 (38%), Positives = 539/985 (54%), Gaps = 85/985 (8%) Query: 4 IPQNP-LILVDGSSYLYRAYHAFPP-----LTNSAGEPTGAMYGVLNMLRSLIMQYKPTH 57 I NP ILVDG S +R+Y AF L AG PT +G + L +I KP Sbjct: 15 ISNNPTFILVDGHSLAFRSYFAFAKGKNGGLRTKAGIPTSVCFGFIKCLLEVITTQKPQA 74 Query: 58 AAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDV 117 AV FD TFR E + YK+ R P+D +E L+ +++ + LP+ G EADDV Sbjct: 75 IAVAFDLGLPTFRHEADDTYKADRLETPEDFIPDLENLNELLRGLNLPIFTAPGYEADDV 134 Query: 118 IGTLAREAEKAGRPVLISTGDKDMAQLVTPN--ITLIN-------TMTNTI--LGPEEVV 166 +GTL+++A AG V I +GD+D+ QL+ + IT++N N+I E+V Sbjct: 135 LGTLSQKASAAGYRVKILSGDRDLFQLIDGDKGITVLNFSPEALKRYANSITEFQAEQVK 194 Query: 167 NKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSF 226 K GV P I+DF AL GD SDNIPGV G+GEKTA LL LD +YA+ ++I G Sbjct: 195 EKLGVLPTQIVDFKALCGDKSDNIPGVRGIGEKTAVKLLNTYNSLDGIYAKLDEITG--- 251 Query: 227 RGAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKR 286 + KL KE A S LA I DV LE+ E ++ +L+ + +K EF + Sbjct: 252 ----STQEKLIAGKEDASHSRYLAQIVVDVPLEVNLEDCQLTGFDTNQLIPILEKLEFNK 307 Query: 287 WTADVE------AGKWLQAKGAKPAAKPQETSVADEAPEVTATVISY-DNYVTIL---DE 336 + + G+ L+ K + ++ + + E TA D+ + I E Sbjct: 308 FLDQINELQQKLGGQVLETKAEEINTTQEDDDLWFFSGEDTANTEKRPDSSIQIRIINTE 367 Query: 337 ETLKAWIAKLEKA-----PVFAFDTETDSLDNISANLVGLSFAIEPGV--AAYIPVAHDY 389 + L+ +A L+K PV A+DTET +L+ A LVG+ G AAYIPV H Sbjct: 368 DKLQELVAILQKCTNLEKPV-AWDTETTALEPRDAALVGIGCCWGTGSDEAAYIPVGH-- 424 Query: 390 LDAPDQISRERALEL----LKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLE 445 +I L+L L+P+LE+ K QN K+DR I GI L G+ FDTML Sbjct: 425 -----KIGHNLQLDLVVSALRPILENANYPKTFQNAKFDRLIFKCQGINLVGVVFDTMLA 479 Query: 446 SYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK-GKNQLTFN--QIALEEAGRYAAEDA 502 SY++N H++ L+ R L + + +I K GK +L N I ++ Y Sbjct: 480 SYLINP-DTTHNLSDLSLRNLGLQLTEYNDIVTKTGKKELQKNIADIGIDIVAYYCGTQV 538 Query: 503 DVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLR 562 T QL K+ +L K + +E PL VL+ +E GV+I+ L S++L Sbjct: 539 YATFQLVDKLRCELNKTPDLAKLLVEVEQPLEAVLAEMEYTGVRINSSYLQELSQQLESE 598 Query: 563 LAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGI--KPLKKTPGGAPSTSEEVLEEL--A 618 LA+LE +A EIA E+FNL S KQL ILF+K G+ K +K G ST LE+L Sbjct: 599 LAKLEIQATEIASEKFNLDSPKQLSYILFDKLGLSTKYSRKIQTGY-STDAATLEKLQEV 657 Query: 619 LDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQN 678 + I+EYR +KLKSTY D LP +++P++ R+HT ++Q T+TGRLSS++PNLQN Sbjct: 658 DNTGFVDAIIEYRTSSKLKSTYVDALPALVHPQSQRLHTDFNQTATSTGRLSSSNPNLQN 717 Query: 679 IPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATA 738 IP+R R+IR+AF+ +++V+ADYSQIELRI+AHLS++ L+ A+ + +DIH TA Sbjct: 718 IPIRTAFSRQIRKAFLPESGWLMVAADYSQIELRILAHLSQEPVLVQAYKQNEDIHTVTA 777 Query: 739 AEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGV 798 VF + VTSE+RR AK INFG+IYGM + AR + + A +++ + ERYP V Sbjct: 778 KLVF--EKDEVTSEERRFAKTINFGVIYGMGSLKFARSTGVDKANANEFIRRFNERYPQV 835 Query: 799 LEYMERTRAQAKEQGYVETLDGRRLY---------------LPDIKSSN----GARRAAA 839 Y+E+ + +A QGYVET+ GRR Y L DI S GA A Sbjct: 836 FAYLEKVKKEAISQGYVETILGRRRYFDFTSKSLKELKGISLEDIDLSRLKNLGAYNAGL 895 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 R+A NAP+QG++ADIIK AM+ + L+ Q R+++QVHDELVFEV + + Q Sbjct: 896 LRSAANAPIQGSSADIIKIAMVQLHEVLRNYQ--ARLLLQVHDELVFEVPPQEWGELQLQ 953 Query: 900 IHQLMENCTRLDVPLLVEVGSGENW 924 I +MEN L VPL+V+V +G+NW Sbjct: 954 IKSVMENAMSLSVPLVVDVRAGDNW 978 >UniRef50_A0PZF5 DNA polymerase I n=27 Tax=Clostridia RepID=A0PZF5_CLONN Length = 878 Score = 561 bits (1447), Expect = e-158, Method: Compositional matrix adjust. Identities = 334/928 (35%), Positives = 524/928 (56%), Gaps = 65/928 (7%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 L+++DG S +YRA+ A PPLTN G T A+YG + ML + + KP + FD K T Sbjct: 6 LLILDGHSLMYRAFFALPPLTNKEGIHTNAIYGFIKMLLKMKEEIKPDYIVTTFDKKAPT 65 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR + +E YK+ R MPD+L Q + ++ + + + + G EADD+IGTL++ AE+ Sbjct: 66 FRHKEYEEYKAGRAKMPDELNEQFPIVKDILNKLAINIFEIEGFEADDLIGTLSKFAEEK 125 Query: 129 GRPVLISTGDKDMAQLVTPNITLI----NTMTNTILGPEEVVNKYGVPPELIIDFLALMG 184 G V I TGD+D QL T N+ ++ I +++ +YGV P ID LMG Sbjct: 126 GIEVYIVTGDRDALQLATDNVRVVINKKGMSEKEIYDKNKMIEEYGVTPTEFIDVKGLMG 185 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 D SDNIPGVPG+G KTA L++ G ++ + E I+G K M L +E A Sbjct: 186 DKSDNIPGVPGIGNKTALKLIKEYGSIENVLENVENISG------KKMKQNLIDYREQAI 239 Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLG---LFKKYEFKRWTADVEAGKWLQAKG 301 LS +LATI DV +E+ + E++ ++ G LF+ FK ++ + L + Sbjct: 240 LSKKLATICKDVPIEINLD--EIKSKEDYDIQGVRLLFQSLGFKSLLDNIGDNEGLDKED 297 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 A+ +E+ + ++ + T+ ++ +V +D+ + + D + Sbjct: 298 E---AEVKESDINIKSTNIN-TIENFSKFVEGIDD----------------SIYIQADFV 337 Query: 362 D-NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN 420 D NI + + + + ++ A++ D + E+LK L E+EK KV + Sbjct: 338 DENIYSKIEFNNLYVRHKEEVFVISANEIKDKDGA----KYFEILKNLFENEKIKKVCHD 393 Query: 421 LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG 480 K +L + I + IAFDT + +Y+L + + L E L ++ K Sbjct: 394 SKKVYVVLKKHNIAAKNIAFDTKIAAYLLQPSKSDYMLKDLIEEMLL--------LSLKD 445 Query: 481 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI 540 + + N+ Y +D ++ K+ D++K + +E+PL+ VL+ + Sbjct: 446 DDNIKINE-------TYYIKD------VYEKLEKDIKKSNME-ELLYTVELPLIEVLASM 491 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK 600 E G ++D L E+ + LEK+ HE+A EEFN+ S KQL ILFEK + +K Sbjct: 492 ECEGFRVDENRLTEIGEKFKKEIETLEKEIHELADEEFNIKSPKQLGKILFEKLDLPVIK 551 Query: 601 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 KT G ST+ EVLE+L +P+ + I+EYR + KL STY + L +I+ + ++H+S++ Sbjct: 552 KTKTGY-STNAEVLEKLKDSHPIIEKIIEYRQITKLDSTYVEGLKNVID-EDAKIHSSFN 609 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPED-YVIVSADYSQIELRIMAHLSR 719 Q VT TGRLSST+PNLQNIP+++E GR IR+ F+ D VI SADYSQIELRI++H++ Sbjct: 610 QTVTTTGRLSSTEPNLQNIPIKHEMGREIRKVFVPNNDESVIFSADYSQIELRILSHIAD 669 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 D+ L+ AF KDIH TA+EVF +P++ VT R +AKA+NFG++YG+ AF L++ +N+ Sbjct: 670 DEKLIDAFKHHKDIHTITASEVFKVPIDEVTPLMRSNAKAVNFGIVYGIGAFSLSKDINV 729 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 RKEA++Y+D YF RYP V +Y++ ++A+ G+V T+ R+ Y+P+I+S N R Sbjct: 730 SRKEAKEYIDTYFSRYPNVKKYIDEIISKAEVDGFVTTILNRKRYIPEIQSRNKIVRGFG 789 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 ER A+N P+QG+AADIIK AM+ V L+ + +I+QVHDEL+ V+KD+++ V + Sbjct: 790 ERLAMNTPIQGSAADIIKLAMVEVYNELKNRNLKSTLILQVHDELILNVYKDELEEVKEM 849 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWDQA 927 + MEN +L VPL +V GE W +A Sbjct: 850 VVDKMENVMKLLVPLEADVNVGETWYEA 877 >UniRef50_B8I3Y7 DNA polymerase I n=6 Tax=Clostridium RepID=B8I3Y7_CLOCE Length = 896 Score = 560 bits (1444), Expect = e-158, Method: Compositional matrix adjust. Identities = 345/929 (37%), Positives = 522/929 (56%), Gaps = 50/929 (5%) Query: 6 QNPLILVDGSSYLYRAYHAFPP---LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 ++ +++VDG+S L RA++ LT S G T A++G +N+L + P + V F Sbjct: 4 EDKILVVDGNSILNRAFYGLSRAAMLTTSEGLYTNAVFGFINILSKHLQDENPKYVCVAF 63 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 D K TFR + ++ YK+ R MP++L Q+ + ++ AM + + V G EADD++GT++ Sbjct: 64 DLKAPTFRHKEYDQYKAQRKGMPNELAVQVPIIKQVLDAMNIARVEVEGFEADDILGTVS 123 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPN------ITLINTMTNTILGPEEVVNKYGVPPELI 176 AEK G ++ TGD+D QL + +T N E+V+ KYGV P + Sbjct: 124 SYAEKQGMKTILLTGDRDSLQLASNYTRIKLPVTRANKTETDEYDYEKVIEKYGVTPGQL 183 Query: 177 IDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKL 236 ID LMGD+SDNIPGVPG+GEKTA AL++ L+ LY +K+ K + KL Sbjct: 184 IDVKGLMGDTSDNIPGVPGIGEKTALALIKKFNSLEELYENIDKV------DKKGVREKL 237 Query: 237 EQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKW 296 E NKE+A++ +LATI V + E+L +FK+ EFK Sbjct: 238 ENNKELAFMCKRLATIYRKVPGVENLNDFARLEIDKEKLYSIFKRLEFKTLI-------- 289 Query: 297 LQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDT 356 E + P V AT +V + L+++I+ ++ + + + Sbjct: 290 -------------EKFGLENTPFVEATEALKIEHVDVDSISELQSYISVIKLSGMVSVYY 336 Query: 357 ETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALK 416 D + +L + E A I ++++ E + L+ + E + K Sbjct: 337 HVDPAGSYLDDLCIFACNEEYAPANII--------FSEKLTCETVVNELREIFESKDIEK 388 Query: 417 VGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEI 476 G +LK L ++GIEL + FDT + +YIL + + L+E LK E + Sbjct: 389 YGHDLKNLYKYLKSHGIELENVIFDTFIAAYILEPTRSTYTISELSEDKLKQSITPVEIL 448 Query: 477 AGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPV 536 K +L Q + A + L K+ P + + G ++ IE+PLV V Sbjct: 449 YDKHGKRLEQGQDV--SSSEVCAAAVNAIYGLTQKLRP-IIRDNGQDELYYKIELPLVEV 505 Query: 537 LSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGI 596 L+ +E G K+D + L +S+EL RL LE + + AGE FN++S KQL ILFEK G+ Sbjct: 506 LANMELRGFKVDVENLKAYSKELDSRLVILENEIYMQAGETFNINSPKQLGVILFEKLGL 565 Query: 597 KPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVH 656 KKT G STS EVLE+L+ + + + ILEYR L KLKSTY D L L + + G++H Sbjct: 566 PVGKKTKTGY-STSAEVLEQLSYKHEIVERILEYRQLMKLKSTYADGL-LSVLEQDGKIH 623 Query: 657 TSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFI-APEDYVIVSADYSQIELRIMA 715 ++++Q VTATGR+SST+PNLQNIPV+ E GR+IR+ FI DYV++ ADYSQIELR++A Sbjct: 624 SNFNQTVTATGRISSTEPNLQNIPVKLEMGRKIRKVFIPTNSDYVLLDADYSQIELRVLA 683 Query: 716 HLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLAR 775 H++ D ++ AF +DIH TA++VFG+P E V+S R AKA+NFG++YG+ F L++ Sbjct: 684 HITGDPNMIEAFINNEDIHTTTASKVFGIPPEEVSSLMRSRAKAVNFGIVYGIGDFSLSK 743 Query: 776 QLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGAR 835 + + +KEA+KY+D Y ++Y V EYM T + KE G+V TL RR YLP++KSSN Sbjct: 744 DIGVTKKEARKYIDDYLDKYSKVKEYMSDTVEKGKEFGFVTTLYNRRRYLPELKSSNFNM 803 Query: 836 RAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDA 895 R+ ER A+N P+QG+AADIIK +M+ V L+ + + ++I+QVHDEL+ E K +++ Sbjct: 804 RSFGERVAMNTPIQGSAADIIKISMVKVYTELKKRKLKSKLILQVHDELIVETEKSELEE 863 Query: 896 VAKQIHQLMENCTRLDVPLLVEVGSGENW 924 V+K + MEN +L VPL V+V G++W Sbjct: 864 VSKLLKDCMENAVQLKVPLTVDVKHGDSW 892 >UniRef50_D0WFK8 DNA polymerase I n=2 Tax=Coriobacteriaceae RepID=D0WFK8_9ACTN Length = 905 Score = 558 bits (1439), Expect = e-157, Method: Compositional matrix adjust. Identities = 351/943 (37%), Positives = 499/943 (52%), Gaps = 65/943 (6%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSA-GEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 + ++DG+S ++RAYHA PP N+ G PT A +G ++ML +P FDA Sbjct: 5 IAVIDGNSLMHRAYHAVPPTMNAVDGTPTNAAFGFMSMLLKFYEDARPDAIVCAFDAGKP 64 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 T R E + YK+ RPPM D+LR Q + ++ AMG+P++ V G E DD++GT+A E Sbjct: 65 THRIEAMKAYKAQRPPMDDELRVQFPVIEGLLDAMGIPVVKVKGWEGDDILGTIAARDEA 124 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINT---MTNTIL-GPEEVVNKYGVPPELIIDFLALM 183 G L+ TGDKD QLV+ + ++ T +T+ ++ GP+EV+ +YGV DFL L Sbjct: 125 LGWNTLLVTGDKDAYQLVSDHTRVVTTRKGITDVVIYGPDEVLERYGVTAAQFPDFLGLQ 184 Query: 184 GDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVA 243 GD++DNIPGVPG+G KTA LLQ G +D +Y +K+ G + L N++ A Sbjct: 185 GDTADNIPGVPGIGPKTATKLLQAYGSMDGIYKNLDKLKGKQLQ-------NLADNRDQA 237 Query: 244 YLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAK 303 YLS LA I D++ EL E AA + F +F A V A + +G Sbjct: 238 YLSRDLAVIVQDLDFELDLESAAFPSFAASAVAEAFGAVQFSSHLARVLA--LIGGEGDL 295 Query: 304 PAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDN 363 P+A E D A A + L+AW+A A E + Sbjct: 296 PSAASIELPDIDPATGDAARAL-------------LEAWLAPRADAVPSMLADEGALVLG 342 Query: 364 ISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKY 423 + + E A++ HD + + E A+ + ++ D + Sbjct: 343 VEVVEPAQASLFESACIAFVSDGHDVV----RFENEDAIAAVARIVRDGCFCTLDAKATM 398 Query: 424 DRGILANYGIE--------LRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEE 475 R + E L AFD L +Y+L S A +D +L E +L F++ Sbjct: 399 QRAYPPDSSREAFVAPAELLSARAFDIGLSAYLLQSNASSYDYATLCEEYLAASLPAFDD 458 Query: 476 IAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQ---------KHKGPLNVF 526 A +EA +A + L M D + + G + + Sbjct: 459 --------------ACDEACAHAFVAPRLARALDGAMACDAEEASPDGTSGRSVGTRSCY 504 Query: 527 ENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQL 586 +I++PLVPVL+ +ER G +ID L + + + + E+AGEEFNL S KQL Sbjct: 505 YDIDLPLVPVLAVMERVGARIDVDALAEMGRSVAEEIDGIRTRVFELAGEEFNLDSPKQL 564 Query: 587 QTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPL 646 +LFEK G+ KKT G ST + L +L +P+ + IL YR LAK++STY + LP Sbjct: 565 SVVLFEKLGLPHGKKTQRGY-STDAKTLSKLEDVHPIAREILRYRELAKMESTYIEALPR 623 Query: 647 MINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY-VIVSAD 705 M G VHT ++Q VT TGRLSS+DPNLQNIPVR E GRRIR F+ + +SAD Sbjct: 624 M-RAGDGLVHTHFNQTVTTTGRLSSSDPNLQNIPVRTEFGRRIRGCFVPLRTGDLFMSAD 682 Query: 706 YSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLI 765 YSQIELR++AHLSRD+ L+ AF G D H +TAA VFG+PLE VT R AKA+NFG++ Sbjct: 683 YSQIELRLLAHLSRDEHLVHAFCSGADFHASTAARVFGVPLEEVTPSMRSRAKAVNFGIV 742 Query: 766 YGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYL 825 YG AFGLA+ L I KEAQ+ +D YFE YPGV +++ T + + GY T+ GRR ++ Sbjct: 743 YGQQAFGLAQNLGIGFKEAQEMIDRYFEAYPGVRAFLDGTVEEVRACGYATTMFGRRRHI 802 Query: 826 PDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELV 885 P++K+ N A+R ER A+N PMQG+AADI+K AM V L ++++QVHDEL Sbjct: 803 PELKAKNPAQRGFGERTAMNHPMQGSAADIVKMAMNEVQRRLVDGGFAAQVMIQVHDELD 862 Query: 886 FEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 V ++DAV + M N L+VPL+V+V S + W +AH Sbjct: 863 LSVPVSELDAVGALVRDAMTNVVTLEVPLIVDVQSAKTWAEAH 905 >UniRef50_D2RIE4 DNA polymerase I n=5 Tax=Clostridiales RepID=D2RIE4_ACIFE Length = 872 Score = 558 bits (1438), Expect = e-157, Method: Compositional matrix adjust. Identities = 362/937 (38%), Positives = 520/937 (55%), Gaps = 88/937 (9%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 +L+DGSS ++RA+ A PPLTN G TGA+YG+ NM+ L+ + +P++ V FD KT Sbjct: 5 FLLIDGSSLIHRAFFALPPLTNKNGVNTGAVYGLCNMILKLLQEIQPSYMLVAFDKSRKT 64 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR E F YK R P +L+ Q ++++MG+P L V EADD+IGTL+ A + Sbjct: 65 FRTEKFPEYKGQRKATPPELKEQFPLSIQLLQSMGIPTLEVDNYEADDIIGTLSSGAPEN 124 Query: 129 GRPVLISTGDKDMAQLVTPNITLINT---MTNTILGPEEVVNK--YGVPPELIIDFLALM 183 + V I TGD+D QL+ N+ ++ T ++N + E+ + G+ P IID LM Sbjct: 125 VQ-VRIVTGDRDEFQLIKGNVQVLFTKKGISNIAVYDEKAFGEEYQGLQPRQIIDLKGLM 183 Query: 184 GDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVA 243 GD+SDNIPGVPGVG KTA L+ ++ + E++ G K + KL N+E A Sbjct: 184 GDTSDNIPGVPGVGPKTALKLITEYRTVENVLDHAEEVKG------KALKEKLRNNREQA 237 Query: 244 YLSYQLATIKTDVELELTCEQLEVQQ-PAAEELLGL-------FKKYEFKR-WTADVEAG 294 LS LATI C Q+ + + P A L GL ++ +FK W V Sbjct: 238 LLSKDLATI---------CLQVPIDRDPGAYVLTGLTEESRQLMQELQFKNLWDRFVPV- 287 Query: 295 KWLQAKGAKPAAKPQETSVADE--APEVTATV-ISYDNYVTILDEETLKAWIAKLEKAPV 351 L A S+ + A E TV I+ D L EE I K Sbjct: 288 --LGCAAGTDAGSSDPLSLFGQPVAAETLDTVEITSDAQGEALVEE-----IRARGKQVA 340 Query: 352 FAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLED 411 A+ + SL + + L+FA Y+ P+ +E L LL+ Sbjct: 341 LAWQLK-GSLPVLEMERLDLAFA-----------GKHYVFCPETAGKEAVLSLLQDPAIS 388 Query: 412 EKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTI 471 + A + KY G G L+GI D L Y+ A + + +L E +L + Sbjct: 389 KAAADPKELYKYMMG----QGKNLQGITDDPALAGYLYEPGASGYGIQALGEEFLPAAS- 443 Query: 472 TFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEM 531 G A + A + L K+ + +G ++E+IE+ Sbjct: 444 -----------------------GEGAQDTAALVPVLREKL-----EERGLTRLYEDIEL 475 Query: 532 PLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILF 591 PL L+ +E G+ +D +L + E+T ++ LE++A + AGE+FNL+S KQL +LF Sbjct: 476 PLTENLAEMEFTGIAVDQAMLDEVTGEMTKKVQALEQQAWDQAGEQFNLNSPKQLGVLLF 535 Query: 592 EKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPK 651 EK G+ +KKT G ST VLE L ++PL + ++ YR L+KL STY L +INP Sbjct: 536 EKLGLPIIKKTKTGY-STDVSVLEALQGEHPLIETLISYRQLSKLLSTYLLGLHPLINPA 594 Query: 652 TGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY-VIVSADYSQIE 710 TGR+HT ++Q T TGRLSST+PNLQNIP R E G+R+R+ F+ E Y +++S DYSQ+E Sbjct: 595 TGRIHTHFNQMATVTGRLSSTEPNLQNIPTRTEVGKRMREMFVPGEGYDLLMSCDYSQVE 654 Query: 711 LRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSA 770 LR+MA +++D+ LL +F G+D+H TA+E+FG+PL+ VT R AK +NFG+IYG+S Sbjct: 655 LRVMASIAQDELLLDSFRHGQDVHARTASEIFGVPLDQVTPYMRSKAKTVNFGIIYGISD 714 Query: 771 FGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKS 830 FGLARQL +PR EA +Y++ YF RY GV YMER + +A+E GYVETL GRR YLPDI + Sbjct: 715 FGLARQLGVPRGEAAQYIESYFARYTGVKAYMEREKQKAREMGYVETLFGRRRYLPDINA 774 Query: 831 SNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHK 890 N RR+ AER AIN P+QGTAADIIK AM+ V L+ + + R+++QVHDELV E+ Sbjct: 775 KNFNRRSFAERTAINTPIQGTAADIIKVAMLKVARNLKEARVKSRVLLQVHDELVLEIPA 834 Query: 891 DDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 + + V K + + ME+ L VPL+ +V G+NW +A Sbjct: 835 AEQETVGKIVKETMEHAVDLAVPLVADVAVGKNWARA 871 >UniRef50_P74933 DNA polymerase I n=3 Tax=Bacteria RepID=DPO1_TREPA Length = 997 Score = 558 bits (1438), Expect = e-157, Method: Compositional matrix adjust. Identities = 357/1012 (35%), Positives = 522/1012 (51%), Gaps = 107/1012 (10%) Query: 6 QNPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + L L+D +YR+YHAF PL N +G A+YG L +L+ Y+P + VFD Sbjct: 4 KKTLYLLDAYGLIYRSYHAFARAPLINDSGANVSAVYGFFRSLHTLLCHYRPRYFVAVFD 63 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 + TFR + YK+ R +L AQI + ++ A+G+ +L G EADD+I TLA+ Sbjct: 64 SLTPTFRHVQYPAYKAKRDKTSAELYAQIPLIEEILCALGITVLRHDGFEADDLIATLAK 123 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN---TILGPEEVVNKYGVPPELIIDFL 180 V+I + DKD+ QLV + ++ + T V ++ V P ++D Sbjct: 124 RVAAEHCHVVIISSDKDVLQLVCDTVQVLRLDIDHKWTCCDAAYVQQRWTVMPTQLLDLF 183 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 +LMGDSSDN+PGV G+G KTA LL G LD +Y ++ + + K+ K Sbjct: 184 SLMGDSSDNVPGVRGIGPKTAAHLLHCFGTLDGIYRH-------TYSLKEALRTKIVCGK 236 Query: 241 EVAYLSYQLATIKTDVELELT-----CEQLEVQQPAA----EELLGLFKKYEFKRWTADV 291 + A+ S L ++ DV + C L+V A E L L ++Y D Sbjct: 237 KDAFFSRSLIELRDDVPCVFSLEDSCCIPLDVTSAARIFVREGLHALAQQYRACVQEIDT 296 Query: 292 EA-------------------GKWLQAKGAKPAAKPQETSVADEAPEVTAT--------- 323 EA + ++ A+ P+ SV + +A Sbjct: 297 EATNDTLQMTESSVLTSGRCANECFLSQVEGRASTPEVNSVLKSELKTSAVSGAIPIENR 356 Query: 324 --------VISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAI 375 S +Y + D LK I V AFD ETD L LVG S Sbjct: 357 DLRQDVMLARSAGHYRGVTDPVELKRIIDCACANGVVAFDCETDGLHPHDTRLVGFSICF 416 Query: 376 EPGVAAYIPVAHDYLDAPD--------QISRERA-------------------------- 401 + A Y+P L PD Q + R+ Sbjct: 417 QEAEAFYVP-----LIVPDVSLHTESTQCTCARSTNVETEKECTEQHGVSASAVQDPAYV 471 Query: 402 ---LELLKPLLEDEKALKVGQNLKYDRGILANYGI--ELRGIAFDTMLESYILNSVAGRH 456 + L+ L DE V N K+D ++ G+ FDTM+ +++L+ G + Sbjct: 472 QAVMHQLRRLWNDETLTLVMHNGKFDYHVMHRAGVFEHCACNIFDTMVAAWLLDPDRGTY 531 Query: 457 DMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDL 516 MD LA + + +TITFEE+ KG+ TF + E A RYAAEDAD+T +L+ + L Sbjct: 532 GMDVLAASFFQIRTITFEEVVAKGQ---TFAHVPYECAVRYAAEDADITFRLYHYLKLRL 588 Query: 517 QKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGE 576 + G L+VFE IEMPL+P+L+R+E G+ + V+ + + + + E +AG Sbjct: 589 ET-AGLLSVFETIEMPLLPILARMEEVGIFLRKDVVQQLTRSFSDLIQQYEHDIFSLAGH 647 Query: 577 EFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKL 636 EFN+ S KQLQT+LF++ + P KK G ST VL++LA +P+ + IL +R L+KL Sbjct: 648 EFNIGSPKQLQTVLFQELHLPPGKKNTQGY-STDHSVLKKLARKHPIAEKILLFRDLSKL 706 Query: 637 KSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP 696 +STYT+ L + + +TGRVHTS+ Q TATGRLSS +PNLQNIP+++ EGR+IRQAF A Sbjct: 707 RSTYTESLAKLAD-QTGRVHTSFVQIGTATGRLSSRNPNLQNIPIKSTEGRKIRQAFQAT 765 Query: 697 EDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRS 756 + ++SADY+QIEL ++AHLS+D+ LL AF + DIH TAA +F + ++ V RR Sbjct: 766 VGHELISADYTQIELVVLAHLSQDRNLLNAFRQHIDIHALTAAYIFNVSIDDVQPAMRRI 825 Query: 757 AKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVE 816 AK INFG++YGMSAF L+ +L I +KEAQ ++ YFE YPGV + + Q ++ GYV Sbjct: 826 AKTINFGIVYGMSAFRLSDELKISQKEAQSFIYRYFETYPGVYAFSTQVAEQTRKTGYVT 885 Query: 817 TLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRM 876 +L GRR Y+ I S N RA AER A+N +Q +AADI+K AMIA+ R ++ Sbjct: 886 SLAGRRRYIRTIDSRNTLERARAERMALNTQIQSSAADIVKIAMIAIQRAFARRPLRAQL 945 Query: 877 IMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 ++QVHDEL+FE + V + + ME+ L +PL + V SG +W H Sbjct: 946 LLQVHDELIFEAPAAETAIVKEILFAEMEHAVELSIPLRIHVESGNSWGDFH 997 >UniRef50_B6G9J6 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6G9J6_9ACTN Length = 932 Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust. Identities = 365/970 (37%), Positives = 522/970 (53%), Gaps = 103/970 (10%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSA-GEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 + ++DG+S ++RA+HA PP N+ G PT A++G LNM ++ ++ P FD Sbjct: 14 IAVIDGNSLMHRAFHAVPPTMNAPDGSPTNAVFGFLNMFLKMVDEFSPDGVVCAFDKGHP 73 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 R E+ YK+ RPPM +LRAQ + ++ ++ +P++ + G E DD++GTLAR E Sbjct: 74 KVRMEMLPQYKAQRPPMDPNLRAQFPMIKELLASLSVPVVELEGWEGDDILGTLARRGEA 133 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKY-GVPPELIIDFLAL 182 AG + + TGD+DM QLVT ++ +++T I+ PE V + Y G+ PEL+ DF L Sbjct: 134 AGCDMYLVTGDRDMYQLVTDHVHVVSTRKGLSDIAIMTPESVDDLYHGITPELVPDFYGL 193 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 GDSSDNIPGVPG+G K A AL+ G LD + A +++ G M L + + Sbjct: 194 KGDSSDNIPGVPGIGPKKASALIVQYGSLDEVIAHADEVKG-------KMGESLRAHIDD 246 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPA--------AEELLGLFK-KYEFKRWTADVEA 293 A +S ++ATI TD +E C+ EV PA A LG+ + F D A Sbjct: 247 ALVSRKIATIMTDAPVE--CDLDEVSFPAYDAASVSAALGALGIMAMQNRFLALLGDAAA 304 Query: 294 GKWLQAK-------------------------GAKPAAKPQETSVADEAPEVTATVISYD 328 + +K A+ A E A EA E + D Sbjct: 305 SQAAVSKLELPEVLRVSLDASRAFDEAESNRESAEMNACFDELMRALEAGEWLGVAMEDD 364 Query: 329 NYVTILDEETLKAWIA------KLEK--APVFAFDTETDSLDNISANLVGLSFAIEPGVA 380 L T + W+A E+ P F T+ D + ++GL FA V+ Sbjct: 365 KEADALFGMTRRLWVATDRALLSFEEPIGPCGVFATDIDCSHGVIPGVLGLLFAKGSVVS 424 Query: 381 AYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAF 440 + + L D E L+ PL D L F Sbjct: 425 SDVKALLHVLSPVDSSEPE----LMDPLDADPARL------------------------F 456 Query: 441 DTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAE 500 DT++ +Y+L+SV LAE +L H + A G++ + + + A Sbjct: 457 DTVVAAYLLDSVRSDFADAHLAETYL-HAALP----AAAGEDGAPADAPSAAARSAWLAR 511 Query: 501 DADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELT 560 L L+ +G ++F IEMPLV VL+ +ER G+ +DP L SEEL+ Sbjct: 512 ILREPLAAALEA-------QGAEDIFTKIEMPLVRVLASMERAGMYVDPARLAAQSEELS 564 Query: 561 LRLAELEKKAHEIAG-EEFNLSSTKQLQTILFEKQGIKP--LKKTPGGAPSTSEEVLEEL 617 ++AEL + E+AG EEFNLSS QL +LF+K G+ LKKT G ST+ +VLE+L Sbjct: 565 GQIAELSDRIRELAGGEEFNLSSPMQLSRVLFDKLGLPTAGLKKTQRGYYSTNAKVLEDL 624 Query: 618 ALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQ 677 A DY + ++ILEYR K+KSTY D L + GRVHT+Y+Q +TATGRLSS++PNLQ Sbjct: 625 AKDYEIVRLILEYRERTKIKSTYLDTLG-ALRETDGRVHTTYNQTITATGRLSSSNPNLQ 683 Query: 678 NIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRAT 737 NIP R+E G +++AF E V V+ DYSQIELR++AHLS D+ L+ AF EG+D H T Sbjct: 684 NIPTRSELGHAVKKAFSVEEGSVFVAIDYSQIELRLLAHLSGDEHLVGAFNEGEDFHAET 743 Query: 738 AAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPG 797 AA VFG+P+E VT + R AKA+NFG++YG A+GL++ L+IP EA++ +D YF YPG Sbjct: 744 AARVFGVPVEEVTPQLRSRAKAVNFGIVYGQQAYGLSQALDIPMAEAREMIDAYFRAYPG 803 Query: 798 VLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIK 857 V Y++ T A AK+ GY ET+ GRR +P+++ A+R ER A+N PMQG+AADIIK Sbjct: 804 VRTYLDETVAFAKQTGYAETMYGRRRPIPELRVP--AQRMFGERTAMNHPMQGSAADIIK 861 Query: 858 RAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVE 917 AM+ V L+ E +MI+QVHDEL FE +VDA+ + + ME +L VPL+ + Sbjct: 862 IAMVRVAERLRTEGFAAKMILQVHDELDFECPVGEVDALVAMVREEMEGVAQLRVPLIAD 921 Query: 918 VGSGENWDQA 927 GE W +A Sbjct: 922 ASVGETWAEA 931 >UniRef50_D0LQ66 DNA polymerase I n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LQ66_HALO1 Length = 930 Score = 554 bits (1428), Expect = e-156, Method: Compositional matrix adjust. Identities = 369/958 (38%), Positives = 529/958 (55%), Gaps = 69/958 (7%) Query: 9 LILVDGSSYLYRAYHAFPP-----LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 L ++DG Y+YRAY A L+ G PT A++ ML L + +P AVVFD Sbjct: 4 LHILDGHGYIYRAYFALAGPGSQRLSTKGGMPTAALFVYAQMLIRLFIDERPERIAVVFD 63 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 G+TFR+EL + YK+ R P+DL+ Q+ + +A+G P++ GVEADDVI TL Sbjct: 64 PPGRTFRNELDDAYKATRRETPEDLKPQLPYFSKLTEALGWPVICEQGVEADDVIATLVG 123 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALM 183 A G V++ +GDKD+ QLV +T+I+++ + + V K+GVPP + D+LAL+ Sbjct: 124 RARAQGWDVVVYSGDKDLMQLVDEGVTVIDSLRSIVYDAARVEKKFGVPPAKLRDYLALV 183 Query: 184 GDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGL---SFRGAKTMAAKLEQNK 240 GD SDN+PG+PGVG KTA LL +D + A E++ G FR + + +L +++ Sbjct: 184 GDVSDNVPGMPGVGAKTAAKLLGSYDSIDGILAHNEELKGKMGERFRDPEALE-RLARSR 242 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTA----------- 289 E+ L +AT D EL+ +Q A E L + +R +A Sbjct: 243 ELVTLRSDVAT---DAELDALVQQPWEGAQAEELFRELEFETLLERLSAARPDVPSPSGD 299 Query: 290 ---------DVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLK 340 D A A A+PA PQ T VA + + + + + Sbjct: 300 AAATGPKGNDANADDGSAASSARPAFAPQPTQVALDEAALAELLAAACAH---------- 349 Query: 341 AWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRER 400 + VFA E+D A +GL+ A Y+P+AH YL P Q S Sbjct: 350 ------RRVAVFA---ESDGARPDRAIAIGLALAAGEAAPVYLPLAHRYLGVPAQWS--- 397 Query: 401 AL-ELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMD 459 AL E L+ LL D V ++K +L L G+ DTML +Y+L G+ +++ Sbjct: 398 ALPEALRALLADPAVEIVAHDVKSLARLLRTLDAPLAGVLGDTMLAAYLLGQ-EGKLEVE 456 Query: 460 SLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQK- 518 +A + + T + + G G++++ F + + A A A L WP L + Sbjct: 457 DVAGAAVGAELPTRKSLLGSGRSKIGFEAVDISAA----AMRAGGAAAAVLASWPRLGEQ 512 Query: 519 --HKGPLNVFENIE----MPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHE 572 H G + +PL +L+ IE +G+ +D L ++EL +LA +E++ +E Sbjct: 513 LEHAGGDGALRKLHDELELPLALLLAEIEEHGITLDVPYLRALADELGGQLAGIERQVYE 572 Query: 573 IAGEEFNLSSTKQLQTILFEKQGIKP--LKKTPGGAPSTSEEVLEELALDYPLPKVILEY 630 +AGEEFNL S KQL +LFEK G++ +++T G+ ST+ E+LE +A + + I+E+ Sbjct: 573 LAGEEFNLGSPKQLGHMLFEKLGLRADKMRRTKTGSYSTNHEILESMAESHAIIPPIIEH 632 Query: 631 RGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIR 690 R L KLK TY D LP ++NP TGR+HTS++QAV ATGRLSS DPNLQNIP+R + GRRIR Sbjct: 633 RELLKLKGTYLDALPPLVNPHTGRIHTSFNQAVAATGRLSSQDPNLQNIPIRKDIGRRIR 692 Query: 691 QAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVT 750 +AF+A +VS DYSQIELR+MAHLS D+ L+ AF D+H TAAEVF LP E + Sbjct: 693 RAFVAAPGKTLVSIDYSQIELRVMAHLSGDERLVQAFQNDVDVHTQTAAEVFDLPREEIG 752 Query: 751 SEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAK 810 ++RR AKA+N+GL+YG S FGLA+ L I R +A YM+ YFER+ V YM++ A A+ Sbjct: 753 PDERRVAKAVNYGLMYGQSEFGLAQSLGISRAQAAHYMERYFERFSTVRAYMDQVVADAR 812 Query: 811 EQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAE 870 +G TL GRR +PD+ + N RR AAER A N P+QG+AADIIK AM+ V A L Sbjct: 813 AEGAAVTLLGRRRPIPDLDARNQQRRRAAERVAQNTPVQGSAADIIKLAMLRVAAHLARG 872 Query: 871 QPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 + M++ VHDELVFEV + + AK + ME LDVPL+ G +NW AH Sbjct: 873 EWDASMLLTVHDELVFEVVPEQAETFAKAMIAEMEGAYALDVPLVASAGIADNWADAH 930 >UniRef50_Q3AZ16 DNA polymerase A n=12 Tax=Chroococcales RepID=Q3AZ16_SYNS9 Length = 998 Score = 554 bits (1427), Expect = e-156, Method: Compositional matrix adjust. Identities = 384/999 (38%), Positives = 536/999 (53%), Gaps = 91/999 (9%) Query: 9 LILVDGSSYLYRAYHAFPP-----LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 L+LVDG S +R+++AF L G PT YG L L +KP A+ FD Sbjct: 10 LLLVDGHSLAFRSFYAFSKGGEGGLATKDGRPTSVTYGFLKSLLDTGKTFKPQGVAIAFD 69 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVK-AMGLPLLAVSGVEADDVIGTLA 122 TFR + +YK+HR P+ +E L ++ M LPL G EADDV+GTLA Sbjct: 70 TAEPTFRHKADTNYKAHRDVAPEVFFQDLEQLQQILSDQMKLPLCMAPGYEADDVLGTLA 129 Query: 123 REAEKAGRPVLISTGDKDMAQLV--TPNITLI--------NTMTNTILGPEEVVNKYGVP 172 A AG V I +GD+D+ QLV + +I ++ T++ + VV+K GV Sbjct: 130 NRAADAGWGVRILSGDRDLFQLVDNSRDIAVLYMGGGPYAKGSGPTLIQEDGVVSKLGVM 189 Query: 173 PELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYA---EPEKIAGLSFRGA 229 P+ ++D AL GDSSDNIPGV GVG KTA LL+ LD +YA E E + RGA Sbjct: 190 PDKVVDLKALTGDSSDNIPGVRGVGPKTAINLLKDNIDLDAVYATLAEVEAEGPKASRGA 249 Query: 230 --KTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKR- 286 + KL +++ AYLS LA I D+ L E L +QQ AE L + E Sbjct: 250 IKGALVGKLRSDRDNAYLSRMLAEILVDIPLPKDPE-LGLQQVDAEGLSDRLEDLELNSL 308 Query: 287 ------WTADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYD------------ 328 + A G + A + A K + S A P+ T+++ S Sbjct: 309 VRQVGGFVATFSTGGY-GANASSEAEKTPKRSPAKTNPDSTSSIGSAAAPQQGSGEAEVG 367 Query: 329 -----NYVTILDEETLKAWIAKL-----EKAPVFAFDTETDSLDNISANLVGLSFAIEPG 378 I E L+A + +L KAP+ A DTET L+ A LVG+ Sbjct: 368 AIPPLQPQLIESNEALQALVQRLMDCTDPKAPI-AVDTETTDLNPFKAELVGVGVCWGEA 426 Query: 379 --VAAYIPVAH------DYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILAN 430 AYIP+ H P Q+ E L L P L + K QN KYDR IL Sbjct: 427 NDALAYIPIGHKPPSELSEATPPQQLPLETVLMALSPWLASPQHPKALQNAKYDRLILLR 486 Query: 431 YGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIA 490 +G+ L G+ DT+L Y L A +H +D ++ER + T+ ++ GK + TF +A Sbjct: 487 HGLTLNGVVIDTLLADY-LRDAAAKHGLDLMSEREFGFRPTTYGDLVGKKQ---TFADVA 542 Query: 491 LEEAGRYAAEDADVTLQLHLKMWPDLQKHKGP--LNVFENIEMPLVPVLSRIERNGVKID 548 +E A Y D VT +L L++ LQ GP L + E +E PL PVL+++E G++ID Sbjct: 543 IEPASLYCGMDVHVTRRLALQLRQTLQAM-GPQLLPLLEGVEQPLEPVLAQMEATGIRID 601 Query: 549 PKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGI--KPLKKTPGGA 606 L S+EL L LE A ++A +FNL+S KQL +LF+ G+ K ++T G Sbjct: 602 VPYLKTLSDELGSTLNRLETDAKQVAEVDFNLASPKQLGELLFDTLGLDRKKSRRTKTGF 661 Query: 607 PSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTAT 666 ST VLE+L D+P+ ++LE+R L+KLKSTY D LP ++ +TGRVHT ++QAVTAT Sbjct: 662 -STDATVLEKLENDHPVVPLVLEHRVLSKLKSTYVDALPQLVEAETGRVHTDFNQAVTAT 720 Query: 667 GRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTA 726 GRLSS++PNLQNIPVR E RRIR+AF+ E + ++SADYSQIELRI+ HLS ++ L A Sbjct: 721 GRLSSSNPNLQNIPVRTEYSRRIRKAFLPQEGWTLLSADYSQIELRILTHLSGEEVLQEA 780 Query: 727 FAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQK 786 ++ G D+H TA + L + V++++RR K INFG+IYGM A AR+ + EA++ Sbjct: 781 YSTGDDVHALTARLL--LDKDDVSADERRLGKTINFGVIYGMGAQRFARETGVSSAEAKE 838 Query: 787 YMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNG------------- 833 ++ Y +RYP V ++E A +GYVET+ GRR ++ G Sbjct: 839 FLTKYKQRYPKVFAFLELQERLALSRGYVETILGRRRPFHFDRNGLGRLLGKDPLEIDLD 898 Query: 834 -ARRAAAE----RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEV 888 ARR E RAA NAP+QG++ADIIK AM+ + A L ++ R+++QVHDELV EV Sbjct: 899 VARRGGMEAQQLRAAANAPIQGSSADIIKVAMVQLQAVLLSQGIPARLLLQVHDELVLEV 958 Query: 889 HKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 D +D + MEN +L VPL+VE G G +W +A Sbjct: 959 APDALDTTRNLVVNTMENAVKLSVPLVVETGVGRDWMEA 997 >UniRef50_B5RMA2 DNA polymerase I n=2 Tax=Borrelia RepID=B5RMA2_BORDL Length = 922 Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust. Identities = 339/954 (35%), Positives = 517/954 (54%), Gaps = 70/954 (7%) Query: 9 LILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 + L+D + ++R YH PLTNS GE A G L +I + KP + V FD++ Sbjct: 4 IYLIDALNIIFRNYHVMKNNPLTNSKGENVSAFIGFFKTLFFIIKEKKPENLIVTFDSET 63 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 +TFR + + YK+ R PD+L QI + + +P+ + G EADD+I + ++AE Sbjct: 64 QTFRQKQYPSYKATRDAPPDNLIPQIHWIKEGLIKANIPMFELQGYEADDLIASFTKKAE 123 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNTIL--GPEEVVNKYGVPPELIIDFLALMG 184 + I + DKD+ QL++ + ++ L + V+ K+G+ I D+L+++G Sbjct: 124 QNNYLTYIISPDKDLLQLISNQTKIFKIENSSFLEMNNDYVIKKFGINKSQIKDYLSIVG 183 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 D SDNIPG+ G+G+K A LL L+ +Y LS K L + KE A+ Sbjct: 184 DPSDNIPGIKGIGQKGASKLLNEFHTLNGIYE------NLSLINNKYREILLRE-KENAF 236 Query: 245 LSYQLATIKTDVEL-ELTCEQLEVQQPAAEELLGLFKKY--------------------- 282 LSY+L ++ D+EL L +LE E+++ LF++Y Sbjct: 237 LSYKLISLVEDLELPSLETFRLE---NLKEDIILLFEEYSATTLIKSYKSLLKKKNIINT 293 Query: 283 ------EFKRWTADVEAGKWLQAKG--AKPAAKPQETSVADEAPEVTATVISYDNYVTIL 334 + + A+ E K LQ+ A QE +V Y TIL Sbjct: 294 MQKSIFDINKTKANKENTKDLQSTTLYANTLKTIQEENVK---------------YKTIL 338 Query: 335 DEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPD 394 +E L I +L+KA A DTET S++ +N++G+S + + + YIP+ + Sbjct: 339 KKEELDLLIEQLKKASYIAIDTETTSINVYESNIIGISVSFKEFESYYIPIE---TKEKN 395 Query: 395 QISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAG 454 I +E ++ L + L +GQN K+D +L +G + FDTM+ +Y+++ Sbjct: 396 SIGKEYIIQKFNELFNSQPKL-IGQNYKFDYKVLKRHGFNVISAYFDTMIAAYVIDP-NT 453 Query: 455 RHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWP 514 + +D LA ++L HK I +EEI + T I LE A YAAEDAD+T +L + Sbjct: 454 KVSLDFLAAKYLMHKNIKYEEIVPQHS---TLKDIPLEIASNYAAEDADITFRLFNILRK 510 Query: 515 DLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIA 574 L K ++ +NIEMP V+ +E NG+ +D L + EL L +E + + Sbjct: 511 KL-KEDNLESLMKNIEMPFSNVIIEMEENGIYLDSNYLTQYGHELEQELKTIENEVIQSI 569 Query: 575 GEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLA 634 G EFNL+S+KQL TILFEK I K ST +VLE + + + ++ YR LA Sbjct: 570 GIEFNLNSSKQLHTILFEKLNIIVPKNVKQD--STDIKVLETIKDQHESIEKLINYRQLA 627 Query: 635 KLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFI 694 KLK+TYTD L IN KT ++HT++ Q TATGR+SST PNLQNIP++NE GR+IR AF Sbjct: 628 KLKNTYTDNLIEFINEKTNKIHTNFIQTKTATGRISSTAPNLQNIPIKNERGRKIRAAFK 687 Query: 695 APEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQR 754 + + +SADYSQIEL I+AHLS D+ L+ AF KDIH TA+++F + +T R Sbjct: 688 PTKGNIFISADYSQIELVILAHLSEDESLIEAFTHKKDIHIQTASKLFKVDEANITPSMR 747 Query: 755 RSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGY 814 R AK+INFG+IY MSAF L+++L+I R+EAQ ++D YF Y + +++ K+ GY Sbjct: 748 RIAKSINFGIIYRMSAFRLSQELSIKREEAQNFIDSYFNLYSKIKTFIQNQIDFVKQNGY 807 Query: 815 VETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRV 874 ETL RR Y+ +I S N R AER AIN+ +QG+A+DI+K AMI V + + Sbjct: 808 SETLLKRRRYIREINSQNYLERTGAERMAINSIIQGSASDIMKIAMIKVYNEFKNNNLKS 867 Query: 875 RMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 ++++QVHDE++ E +++ + I ++MEN L +PL + +G++W H Sbjct: 868 KILLQVHDEMLIESPEEECEKAQIIIKEMMENAYPLKIPLKTNIETGKSWGDIH 921 >UniRef50_C7RDU0 DNA polymerase I n=3 Tax=Anaerococcus RepID=C7RDU0_ANAPD Length = 879 Score = 551 bits (1419), Expect = e-155, Method: Compositional matrix adjust. Identities = 329/923 (35%), Positives = 507/923 (54%), Gaps = 65/923 (7%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 ++L+DGSS ++RA+ A P LTN+ G T +YG L M + +YKP + V FD KT Sbjct: 5 VMLIDGSSLIFRAFFALPKLTNNDGVMTNGVYGFLTMYNNAFDRYKPDYVLVAFDRASKT 64 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR + FE YK R MP +L Q L ++ ++ + + G EADD++GT A+ A++A Sbjct: 65 FRHKEFEDYKGTRDKMPSELSYQFGILKDILDSLNVKYTDLDGFEADDIVGTYAKMAQEA 124 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVN----KYGVPPELIIDFLALMG 184 G ++ TGD+D QLV I + T E V+ ++G+ P+ +I+ L G Sbjct: 125 GYESVLITGDRDYLQLVDEKIVVNLTKKGVSETKEYTVDTIKEEFGLSPKQLIEVKGLEG 184 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 D SDNIPGV G+G K A +Q G ++ LY ++++G K L ++ +AY Sbjct: 185 DKSDNIPGVDGIGPKKAIGFIQKYGSIEGLYDHIDEVSG------KKTKQTLIDSEAIAY 238 Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304 +S ++ TI T +E E+L+V+ P E L + KY F ++ D++ G Sbjct: 239 MSKKIGTIVTSAPVEFDLEELKVKDPDLESLREKYSKYNFNKFLEDMDGGD--------- 289 Query: 305 AAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNI 364 P+E D T E I ++K F F + + I Sbjct: 290 --SPKE-----------------DKDFTYEKLENPDKLIEAIKKNKEFTFKSIYEGDRYI 330 Query: 365 SANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYD 424 + + L I D++ K + EDE+ +K ++K D Sbjct: 331 HSEIYKLGIKTTDTPTYIIDPDSDFVSK------------FKEIFEDEEIVKNSFDIKED 378 Query: 425 RGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQL 484 +L GI L+ D ML Y+++ +D+ L++ +L ++ + ++ GKGK L Sbjct: 379 VVLLDKLGINLKLPYDDMMLMHYLIDPSRSSYDLKVLSQSYLDYEVKSPVDLLGKGKKAL 438 Query: 485 TFNQIALEEAGRY------AAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLS 538 + + +E G Y A ED+ L+ L + L++++ IE+ L VL+ Sbjct: 439 KYQDLDFDELGNYLASGINAIEDSKEILEDKLDEYH-------MLDLYKEIEIKLSKVLA 491 Query: 539 RIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKP 598 +E G D KVL + E + + ++ ++ +E+AG EFN++STKQL +LF+ + Sbjct: 492 DMEIVGFVTDKKVLEDLKENIDKDIDKITEEIYELAGSEFNINSTKQLGEVLFKDLDLPV 551 Query: 599 LKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTS 658 +KKT G ST+ +VLE+L + + I YR L KL+STY + L I+ + GR+ ++ Sbjct: 552 IKKTKTGF-STNAQVLEKLRDKHQIIPKIERYRELFKLRSTYIEGLEKAID-EDGRIRST 609 Query: 659 YHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLS 718 + Q + ATGRLSS DPNLQN+P++ +EGR IR+AF A E +++ ADYSQIELRI+A LS Sbjct: 610 FRQNIAATGRLSSQDPNLQNLPIKTDEGRLIRKAFRAEEGKILIDADYSQIELRILASLS 669 Query: 719 RDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLN 778 D+ ++ AF EG DIH TA++VF L+ VT QR AKA+NFG+IYG+S +GL++ LN Sbjct: 670 GDRHMIDAFKEGVDIHTKTASKVFHTDLDKVTKRQRSEAKAVNFGIIYGISDYGLSQNLN 729 Query: 779 IPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAA 838 IPRKEA++Y+D Y YP + EYM+ +AKE GYVETL RR Y+P+I S N R+ Sbjct: 730 IPRKEAKEYIDNYMASYPSIKEYMDSIVEKAKEDGYVETLFKRRRYVPEINSRNFNVRSF 789 Query: 839 AERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAK 898 +R A+N P+QGTAADIIK AMI D L+ ++++Q+HDE++ E + D K Sbjct: 790 GQRVALNTPIQGTAADIIKIAMIETDKNLKKAGLDAKIVLQIHDEIILEADESSKDEAIK 849 Query: 899 QIHQLMENCTRLDVPLLVEVGSG 921 + + MEN T L+VPL+V++ +G Sbjct: 850 ILRESMENATDLEVPLIVDIDTG 872 >UniRef50_B5YDJ0 DNA polymerase I n=3 Tax=Dictyoglomus RepID=B5YDJ0_DICT6 Length = 856 Score = 548 bits (1413), Expect = e-154, Method: Compositional matrix adjust. Identities = 331/919 (36%), Positives = 519/919 (56%), Gaps = 93/919 (10%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 ++++DGSS +YR Y+A PPL GE T A+YG + +L + + P V FD T Sbjct: 22 ILIIDGSSLIYRVYYALPPLKTKNGELTNALYGFIRILLKAVEDFNPDLVGVAFDRPEPT 81 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR +++ YK+ RPPM DDL+AQI + ++ +PLL G EADD+I T+ + + Sbjct: 82 FRHVIYKEYKAKRPPMKDDLKAQIPWIREFLRLNDIPLLEEPGYEADDIIATIVNKYKDD 141 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLALMG 184 + +L +GD D+ QLV+ LI+ TI P+ V +++GV P I + L+G Sbjct: 142 LKYIL--SGDLDLLQLVSDKTFLIHPQKGITEFTIYDPKAVKDRFGVEPYKIPLYKVLVG 199 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 D SDNIPGV G+G K A +L+ + +D + KI L + +E+N + Sbjct: 200 DESDNIPGVNGIGPKKASKILEKISSVDEFKS---KIKVLD----SDLRELIEKNWNIIE 252 Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304 + +L T+K +++ +L + E+++ E+++ K+YE K + P Sbjct: 253 RNLELVTLK-NIDKDLILKPFEIKR--DEKVIDFLKRYELKSILQKL-----------FP 298 Query: 305 AAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNI 364 + +E + E+ ++EK FAF D Sbjct: 299 DLQEEENIEIKDVEEINFN---------------------EVEKEGYFAFKCLGDRA--- 334 Query: 365 SANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYD 424 G+S + + G +I D ++I ++ ++ ++ E K+G ++ D Sbjct: 335 ---FEGISLSFKEGEGYFISP----FDFNNEIRKK-----IENIISSENVKKIGSYIQRD 382 Query: 425 RGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQL 484 L +++G FD L SY+LN H +D L +L + ++ AG L Sbjct: 383 LHFL---NCKIKGDVFDVSLASYLLNPERQNHSLDILIGEYLNKTSFIPQKYAG----YL 435 Query: 485 TFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNG 544 + LEE K++G V NIE+PL+PVL +E+ G Sbjct: 436 FPLKSILEER----------------------IKNEGLEFVLYNIEIPLIPVLYSMEKWG 473 Query: 545 VKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPG 604 +K+D + L S+E R+ +LE++ +E+AG FNL+S KQL +LFE+ + KK Sbjct: 474 IKVDKEYLKQLSDEFCERIKKLEEEIYELAGTRFNLNSPKQLSEVLFERLKLPSGKKGKT 533 Query: 605 GAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVT 664 G STS VL+ L +P+ + IL+YR L KLKSTY D +P ++NP+TGRVHT ++ T Sbjct: 534 GY-STSSSVLQNLINAHPIVRKILQYRELYKLKSTYVDAIPNLVNPQTGRVHTKFNPTGT 592 Query: 665 ATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLL 724 ATGR+SS++PNLQNIP+++EEGR+IR+AF++ + Y +VS DYSQIELRIMAHLS++ L+ Sbjct: 593 ATGRISSSEPNLQNIPIKSEEGRKIRRAFVSEDGYFLVSLDYSQIELRIMAHLSQEPKLI 652 Query: 725 TAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEA 784 +AF +G+DIHR TA+E+FG+P E V R AKA+NFG+IYG+S+FGL+ ++I +EA Sbjct: 653 SAFQKGEDIHRRTASEIFGVPEEEVDDLLRSRAKAVNFGIIYGISSFGLSETVSITPEEA 712 Query: 785 QKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAI 844 +K++D YF+ YP V ++++T +A+E+ YV+TL GR+ Y+P+IKS N R A ER AI Sbjct: 713 EKFIDSYFKHYPRVKLFIDKTIHEAREKLYVKTLFGRKRYIPEIKSINKQVRNAYERIAI 772 Query: 845 NAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLM 904 NAP+QGTAADIIK AMI + ++ + + R+++Q+HDEL+ EV +++++ + M Sbjct: 773 NAPIQGTAADIIKLAMIEIYKEIENKNLKSRILLQIHDELILEVPEEEMEFTPLMAKEKM 832 Query: 905 ENCTRLDVPLLVEVGSGEN 923 E L VPL+VE+ G+N Sbjct: 833 EKVVELSVPLVVEISVGKN 851 >UniRef50_B4U0B7 DNA polymerase I n=5 Tax=Streptococcus RepID=B4U0B7_STREM Length = 899 Score = 545 bits (1405), Expect = e-153, Method: Compositional matrix adjust. Identities = 360/938 (38%), Positives = 524/938 (55%), Gaps = 78/938 (8%) Query: 6 QNPLILVDGSSYLYRAYHAF----PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 +N L+L+DGSS +RA+ A N +G T A+YG ML ++ + +PTH V Sbjct: 23 KNKLLLIDGSSVAFRAFFALYNQIDRFKNHSGLHTNAIYGFHLMLDHMMKRVQPTHVLVA 82 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 FDA TFR ELF YK+ R PD+ R Q + M+ A+G+ + EADD+IGTL Sbjct: 83 FDAGKTTFRTELFADYKAGRAKTPDEFREQFPYIRDMLGALGIAFYELEHYEADDIIGTL 142 Query: 122 AREAEKAGRP--VLISTGDKDMAQLVTPNITLINTMTNTI-----LGPEEVVNKYGVPPE 174 + AE+ P V I +GDKD+ QL N T++ + P +++K G+ PE Sbjct: 143 DKMAERTELPFDVTIVSGDKDLIQLTDAN-TVVEISKKGVAEFEEFTPAYLMDKMGLTPE 201 Query: 175 LIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAA 234 ID ALMGD SDNIPGV +GEKT LL G L+ +Y + SF+ +K M Sbjct: 202 QFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEYGSLEGIYQHVD-----SFKPSK-MKE 255 Query: 235 KLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAG 294 L +KE A+LS LATI T + + E + Q P + L + + +F Sbjct: 256 NLLHDKEQAFLSKTLATINTSAPITIGLEDIVYQGPDLDRLSQFYDEMDF---------- 305 Query: 295 KWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAF 354 +Q K A + PQE EVT D + ++T VF F Sbjct: 306 --VQLKNALASQLPQEPVAEIAYQEVT------DIRADMFSDDT------------VFYF 345 Query: 355 DTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKA 414 + D+ L+G ++ + + A ++ EL K +LE A Sbjct: 346 EALRDNYHR--EELIGFAWGNQGQIYASADISL------------LTTELFKKVLEQPIA 391 Query: 415 LKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFE 474 + K + +L++ G++L ++D L +Y+L++V ++M +LA + T E Sbjct: 392 ---TYDFKRSKVLLSHLGLDLPAASYDARLANYLLSTVED-NEMATLARLYTTIPLDTDE 447 Query: 475 EIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLV 534 + GKG + ++ L + A V L M L +H+ +++ +IE+PL Sbjct: 448 VVYGKGVKRAVPDKAVLL---GHLARKVQVLLDSRPVMLDKLAEHEQA-DLYTDIELPLA 503 Query: 535 PVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQ 594 VL+++E G+ ++ L +E+ + + EL ++ +E+AGE FN++S KQL ILFEK Sbjct: 504 NVLAKMEIEGIAVNQDSLQEMAEQNKVVIEELTQEIYEMAGEVFNINSPKQLGVILFEKM 563 Query: 595 GIKPL---KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPK 651 + PL KKT G ST+ +VLE LA P+ IL+YR + KL+STY L I Sbjct: 564 QL-PLHLTKKTKTGY-STAVDVLERLAPIAPIVAKILDYRQITKLQSTYVIGLQDYIMAD 621 Query: 652 TGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFI-APEDYVIVSADYSQIE 710 GR+HT Y Q +T TGRLSS DPNLQNIP+R E+GR IR+AF + +D V++S+DYSQIE Sbjct: 622 -GRIHTRYLQDLTQTGRLSSVDPNLQNIPIRLEQGRLIRKAFTPSHDDAVLLSSDYSQIE 680 Query: 711 LRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPL-ETVTSEQRRSAKAINFGLIYGMS 769 LR++AH+S D+ L+ AF EG DIH +TA VFG+ E VT+ RR+AKA+NFG++YG+S Sbjct: 681 LRVLAHISGDEHLIAAFKEGADIHTSTAMRVFGIEKPEDVTANDRRNAKAVNFGIVYGIS 740 Query: 770 AFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIK 829 FGL+ L IPRK+A+ Y+D YFERYPG+ YMER +AK++GYVETL RR LPDI Sbjct: 741 DFGLSNNLGIPRKQAKAYIDTYFERYPGIKAYMERVVREAKDKGYVETLFKRRRQLPDIN 800 Query: 830 SSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVH 889 S R+ AER AIN+P+QG+AADI+K AMI +D L A +M++QVHDE+V EV Sbjct: 801 SRQFNLRSFAERTAINSPIQGSAADILKIAMINLDQALVAGGFETKMLLQVHDEIVLEVP 860 Query: 890 KDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 ++ AV + + + ME+ L VPL V+ +G++W +A Sbjct: 861 SHELAAVKELVKETMESAVNLAVPLRVDESAGKSWYEA 898 >UniRef50_UPI0001978038 DNA polymerase I n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI0001978038 Length = 913 Score = 545 bits (1405), Expect = e-153, Method: Compositional matrix adjust. Identities = 326/938 (34%), Positives = 531/938 (56%), Gaps = 50/938 (5%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 N L ++D + +R+++A PPL NS G PTG + G N+L+SL T+ A + G Sbjct: 2 NTLSVIDTFGFFFRSFYALPPLKNSQGFPTGLLVGFCNLLQSLYKDPSCTYIAFALEGGG 61 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 + R +++ YK++R P++LR Q+ + MG +++ G EADDV+ ++ + A Sbjct: 62 RNKRRDIYSEYKANRQAAPEELRLQLPIAIEWIAKMGFLNISIEGYEADDVVASINKVAN 121 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDS 186 V I + DKD+ QL+ N + + + + + + KYGV P+ ID+ +L+GDS Sbjct: 122 AQNITVRIISHDKDLYQLIDENTYIYDPIGKKDIKEAQCLQKYGVYPKNFIDYQSLVGDS 181 Query: 187 SDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLS 246 SDN+ GV G+G K+AQ L+Q G +++LYA +++ + +A +++ K+ A+LS Sbjct: 182 SDNVMGVKGIGAKSAQKLIQRFGSIESLYARIDEVESAT---TPRIAKLIKEGKDNAFLS 238 Query: 247 YQLATIKTDVELELTCEQLEVQQ---PAAEELLGLF---KKYEFKRWTADVEA--GKWLQ 298 +L T+ ++ E +++ + P + +L +F +KYE K + +++ ++ Q Sbjct: 239 KKLVTLYDNL-----LENIDLNKCLMPESNPMLKIFDELEKYELKNIISKIQSPYERYTQ 293 Query: 299 AKGA-------KPAAKPQET-SVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAP 350 K A + PQ S DEA T ++ T+ E+++ + + + Sbjct: 294 KKSAQMGIGSLQGTQSPQNIESKKDEAFSFTPHLLD-----TL---ESVEFVLDSIPQGV 345 Query: 351 VFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLE 410 FD E+D LD A LVG SF + A Y+PV H YL +Q++ + A + + Sbjct: 346 RVGFDCESDGLDLQEAQLVGFSFCFDGKNAYYVPVGHRYLGVGNQLNLQEAKSAISRIFT 405 Query: 411 DEKALKVGQNLKYDRG-ILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHK 469 +G NLK+D I G+E G +D+M+ S++ +S+A +D +W H Sbjct: 406 HP---LIGHNLKFDFSLIYRTLGLEHIGKIYDSMILSWLYDSIAPV-GLDKQMLKWFNHT 461 Query: 470 TITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHK--GPLNVFE 527 I+F+ + KG+N F+Q+ + A +YAAEDA T +L+ ++ + K + G L + + Sbjct: 462 MISFDSVVPKGEN---FSQVNIITATQYAAEDAAATFKLYHRLEDEFHKREWGGILELAQ 518 Query: 528 NIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQ 587 N+E P + VL +E G+++D +L ++ + +AEL +K +++ GE FNL+S +QL Sbjct: 519 NLEYPFIKVLMDMELEGIRVDIGLLEILKDKSSEHIAELSQKIYDLCGETFNLNSPQQLA 578 Query: 588 TILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDK-LPL 646 ILFE G+KP + GG ST E+ L + +P+ +IL+YR KLKSTY + L L Sbjct: 579 HILFENLGLKPGRSVKGGL-STDEKTLLAIIDSHPVIDLILDYRESNKLKSTYIEPLLRL 637 Query: 647 MINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADY 706 +T R+HTS+ Q TATGRLSS PNLQNIPVR EEGR+IRQAFI+ E + ++S DY Sbjct: 638 GRTNETHRIHTSFLQNGTATGRLSSKSPNLQNIPVRREEGRKIRQAFISKEGHSLISIDY 697 Query: 707 SQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIY 766 SQIELR++AH +D L+ +F + KDIH TAA +FG E ++R AK+INFGLIY Sbjct: 698 SQIELRLLAHFCKDPSLVESFMQDKDIHFETAARLFG---EQEAMQKRFIAKSINFGLIY 754 Query: 767 GMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLP 826 GM + L++ L IP K+A++Y++ YF +P + +++ E GY +TL G R Y Sbjct: 755 GMGSKKLSQTLQIPLKQAKEYIESYFALFPTIKDFLNAQEEFLLENGYSQTLLGHRRYF- 813 Query: 827 DIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVF 886 D K + +A R IN+ QG+AAD+IK +M + + + ++M++QVHDEL+F Sbjct: 814 DFKRATDFMKANFLREGINSIFQGSAADLIKLSMCEIHK--RYAKSDLKMLLQVHDELIF 871 Query: 887 EVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 E + + AK++ +M + +L+VPL + G NW Sbjct: 872 EAPSERAENYAKEVADIMNSIYKLEVPLKCGIAIGTNW 909 >UniRef50_UPI00016BFC66 DNA polymerase I n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016BFC66 Length = 865 Score = 545 bits (1404), Expect = e-153, Method: Compositional matrix adjust. Identities = 362/932 (38%), Positives = 520/932 (55%), Gaps = 89/932 (9%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 ++LVDG S YRA++ P L+ G T A+YG L +L +L+ ++P AV FD T Sbjct: 3 IMLVDGFSIAYRAFYGMPLLSTKEGIFTNAIYGFLKILFNLLDTHQPDALAVAFDFAAPT 62 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR + YK+ R PMP +L+ QI L ++ AMG+ ++ G EADD++GTLA A A Sbjct: 63 FRHQYALTYKATRKPMPSELQPQIPLLQDLLSAMGISHISAPGFEADDILGTLATAAAAA 122 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNTILGPE-------EVVNKYGVPPELIIDFLA 181 VLI +GD+D+ Q+ T +I + T G E +VV KYGV P +ID A Sbjct: 123 KHDVLIVSGDRDLLQIATDSIQIXIPKTKQT-GTEIESYYAADVVAKYGVIPTELIDVKA 181 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN-- 239 LMGD+SDNIPGV GVGEKTA L+ +DTLYA E I G AKL++N Sbjct: 182 LMGDASDNIPGVKGVGEKTALKLIAEYKNIDTLYANLENIKG----------AKLKENLA 231 Query: 240 --KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWL 297 K+ AY S LATIK D+ + T + + + LF+K EFK L Sbjct: 232 TYKDSAYDSKFLATIKIDIPINFTLQDFSFKLEDNLAVRELFEKLEFK---------SLL 282 Query: 298 QAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTE 357 A PAA PQ D A VT + S +A L+ A VFA E Sbjct: 283 TKFSAIPAA-PQ----VDVASIVTVSTTSV---------------LADLDTAAVFAV-LE 321 Query: 358 TDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKV 417 D+ L + G Y A+ +++E + +K E + K+ Sbjct: 322 NDT----------LYMGVADGSNCYFIAAN--------LAQEYDIIAVKNFFEAKNISKI 363 Query: 418 GQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERW-LKHKTITFEEI 476 N K R IL Y I + G FDT + SY++N + +++ A + +KH +++ Sbjct: 364 LHNSKDLRHILYRYQINIHGNIFDTAIASYLINPLQSDYELSVAATGYDIKH----VDQL 419 Query: 477 AGKGKNQLTFNQIA--LEEAGRYAAEDADVTLQL-HLKMWPDLQKHKGPLNVFENIEMPL 533 G GKN++T+ +A + A A A TLQ LK D L++F +IEMPL Sbjct: 420 LGTGKNKITWASLASXIIVAQLGARASAMWTLQTAQLKELTD----ASMLDLFYDIEMPL 475 Query: 534 VPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEK 593 + VL +E G+ +D L ++L +A LE+ + +A E+FN+SS+KQL ILF+K Sbjct: 476 IEVLFDMEIAGITVDAAFLTAFGKKLDALIATLEQDIYSLADEKFNISSSKQLGLILFDK 535 Query: 594 QGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTG 653 GI KKT G ST+ +L++L Y + +LEYR KL STY L +++ K Sbjct: 536 LGIPAGKKTKTGY-STAANILDKLKDKYVIVAKVLEYRQYKKLHSTYVVGLLKLLD-KNN 593 Query: 654 RVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFI-APEDYVIVSADYSQIELR 712 ++H++++Q VTATGR+SS +PNLQNIP+R G+ IR+AFI + +DYV + ADYSQIELR Sbjct: 594 KLHSTFNQTVTATGRISSAEPNLQNIPIRLALGKEIRRAFIPSNDDYVFLDADYSQIELR 653 Query: 713 IMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFG 772 ++A LS D + AF EG DIH +TA+EVFG ++TVT QR +AKA+NFG++YG+SAF Sbjct: 654 VLASLSADANMQRAFLEGIDIHTSTASEVFG--VDTVTQAQRNAAKAVNFGVVYGISAFS 711 Query: 773 LARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSN 832 LA + + +EA +Y++ YF +YP V Y++ ++ GY TL R+ + ++ SSN Sbjct: 712 LADDIQVSNQEATEYIENYFAKYPNVKHYLDSLITTSQATGYGVTLLNRKRNIVELFSSN 771 Query: 833 GARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDD 892 + +R A+N P+QGTAADIIK+AMI V L+ R +I+ VHDEL+ EVHK + Sbjct: 772 FNTKEYGKRIAMNMPIQGTAADIIKKAMIQVHNALKG--TRSTLILTVHDELLLEVHKSE 829 Query: 893 VDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 ++ + K + ME+ +L VPLLV+V SG +W Sbjct: 830 IEHITKLLKTEMESAVKLAVPLLVDVKSGXSW 861 >UniRef50_B2A646 DNA polymerase I n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A646_NATTJ Length = 930 Score = 545 bits (1404), Expect = e-153, Method: Compositional matrix adjust. Identities = 359/957 (37%), Positives = 522/957 (54%), Gaps = 85/957 (8%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 + +++DG+S L RA++A P L G T A+YG ML L+ P + AVVFD K Sbjct: 10 DKFVVIDGNSLLNRAFYALPLLQTKQGFFTNAIYGFTTMLLKLVQDESPNYLAVVFDTKA 69 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 KTFR F YK HR PD++R Q+ L +++AM + G EADD+IG + A+ Sbjct: 70 KTFRHHKFPEYKGHRDKAPDEMRPQMPMLKELLEAMNINYFEKDGYEADDLIGAFTKIAK 129 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNTI----LGPEEVVNKYGVPPELIIDFLAL 182 + + ++ TGDKD+ QL+ T++ T E+V ++GV + +ID AL Sbjct: 130 QEDKETMVVTGDKDLLQLLDDKTTILLTKKGITQMESYDGEKVKEEFGVNVDKLIDLKAL 189 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 GD SDN+PGVPGVG+KTA LL G L+ LY + + G + +KL NK+ Sbjct: 190 TGDKSDNVPGVPGVGKKTALKLLNNYGDLEKLYKSLDGVGG-------KLQSKLADNKDK 242 Query: 243 AYLSYQLATIKTDVEL--ELTCEQL---EVQQPAAEELLGLFKKYEFKRWTADVEAGKWL 297 A+LS +L TI + L L QL E+ P A ELL +++E + A Sbjct: 243 AFLSKELVTIDCEESLIENLDWNQLSKFEIASPKARELL---QEWEMNSILERLPASDEE 299 Query: 298 QAKGAKPAAKPQETSVADEAPEVTATVISYDN--YVTILDEETLKAWIAKLEKAPVFAFD 355 Q K P + + +S ++DN Y++ E ++LEK F Sbjct: 300 QKKDQSPVNEGKTSS------------FNWDNFYYISEFPHENSDNLESELEK-----FI 342 Query: 356 TETDSLDNISANL-VGLSFAI------EPGVAAYIPVAHDYLDAPDQISRERALELLKPL 408 + + + +L LS A EP + + P+++ + E + P Sbjct: 343 QDGNHKMALYRHLPKKLSTAKQKDSYPEPEGGLVVSINDLIFYVPEKLLSQVLAETIAPK 402 Query: 409 L----------EDEKALKVGQ-NLKYDRGILAN------YGIELRGIAF-DTMLESYILN 450 L ED LK+ N+K + N Y ++ F DT L +Y+L Sbjct: 403 LIKGNDKGTETEDAPKLKIASYNIKRIWHLFKNNTELDLYDLDTNKFLFYDTELMAYLLE 462 Query: 451 SVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHL 510 H ++ + R+ F+ + + E + L L + Sbjct: 463 PTEAPHSIEDMMNRYYGQ-----------------FDLTPYGQDWQAVCERGAILLDL-I 504 Query: 511 KMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKA 570 D+ + + +++NIE+PL +L+R+E G+K+D +VL + RL+E+ K Sbjct: 505 SPLEDILQERNQWQLYKNIELPLAFILARMEFRGIKVDARVLTEMEANIDHRLSEISTKI 564 Query: 571 HEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEY 630 EIAGEEFNL+S KQL ILFEK + +KKT G ST + LE L+ DY + K++L+Y Sbjct: 565 FEIAGEEFNLNSPKQLGYILFEKLQLPVVKKTKTGY-STDAKTLETLSHDYEICKLLLDY 623 Query: 631 RGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIR 690 R L KLK+TY L +I+ TG++HT+Y+Q +TATGRLSSTDPNLQNIP++ EEGR+IR Sbjct: 624 RQLHKLKTTYLVGLKDLISKTTGKIHTTYNQTITATGRLSSTDPNLQNIPIKLEEGRKIR 683 Query: 691 QAF-IAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETV 749 + F I D + ++ADYSQIELRI+AH+S D L+ AF E +DIH TAA+VF + V Sbjct: 684 KGFVIQNSDQLFLAADYSQIELRILAHVSEDTNLIQAFQEQQDIHTQTAAQVFEVESTQV 743 Query: 750 TSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQA 809 T E R AKA+NFG++YG+S +GL+RQL I RK+A+ Y+D Y R+ GV EYM++ QA Sbjct: 744 TREMRSHAKAVNFGIVYGISDYGLSRQLGISRKQAKTYIDNYLTRFSGVKEYMDQIVNQA 803 Query: 810 KEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWL-- 867 K GYVETL RR LPDI N R+AAER AIN P+QGTAADIIK AM+ V+ L Sbjct: 804 KMNGYVETLYNRRRNLPDISHRNFNIRSAAERTAINTPIQGTAADIIKDAMVKVEKELEK 863 Query: 868 QAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 Q + +++QVHDEL+ E++K+ + VA ++ ++MEN L VPL V++ +G NW Sbjct: 864 QDLLDKAALLLQVHDELILEINKEVLSDVATKVKEIMENIIELKVPLTVDLKTGPNW 920 >UniRef50_Q1JIU7 DNA polymerase I n=14 Tax=Streptococcus RepID=Q1JIU7_STRPD Length = 880 Score = 544 bits (1402), Expect = e-153, Method: Compositional matrix adjust. Identities = 356/941 (37%), Positives = 528/941 (56%), Gaps = 84/941 (8%) Query: 6 QNPLILVDGSSYLYRAYHAF----PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 +N L+L+DGSS +RA+ A N +G T A+YG ML ++ + +PTH V Sbjct: 4 KNKLLLIDGSSVAFRAFFALYNQIDRFKNHSGLHTNAIYGFHLMLDHMMKRVQPTHVLVA 63 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 FDA TFR E++ YK+ R PD+ R Q + M+ A+G+ + EADD+IGTL Sbjct: 64 FDAGKTTFRTEMYADYKAGRAKTPDEFREQFPYIREMLTALGIAYYELEHYEADDIIGTL 123 Query: 122 AREAEKAGRP--VLISTGDKDMAQLVTPNITLINTMTNTI-----LGPEEVVNKYGVPPE 174 + AE+ P V I +GDKD+ QL N T++ + P ++ K G+ P Sbjct: 124 DKMAERTEVPFDVTIVSGDKDLIQLTDEN-TVVEISKKGVAEFEEFTPAYLMEKMGLTPN 182 Query: 175 LIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAA 234 ID ALMGD SDNIPGV +GEKT LL G L+ +Y E I G F+ +K M Sbjct: 183 QFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEFGSLEGIY---EHIDG--FKASK-MKE 236 Query: 235 KLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAG 294 L +++ A+LS LATI T + + + + P L + + +F Sbjct: 237 NLINDRDQAFLSKTLATINTASPITIGLDDIVYNGPDVASLSQFYDEMDF---------- 286 Query: 295 KWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAF 354 +Q K + PQE A EVT +S D + +F F Sbjct: 287 --VQLKKGLASQMPQEPVAAISYQEVTN--VSADLF----------------SAEDIFYF 326 Query: 355 DTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKA 414 +T D+ + ++G ++ + A + D+ Q+ + KP+ Sbjct: 327 ETLRDNYHREA--IIGFAWGHGEQIYASTDLGLLATDSFKQVFQ-------KPI------ 371 Query: 415 LKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFE 474 + K + +L++ GIEL ++D L +Y+L++V +++ ++A + I+ E Sbjct: 372 --ATYDFKRSKVLLSHLGIELVAPSYDARLANYLLSTVED-NELSTIARIF---TDISLE 425 Query: 475 E---IAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEM 531 E + GKG + ++ L E + A V L +M L H+ L++++NIE+ Sbjct: 426 EDDTVYGKGAKRAVPDKDVLLE---HLARKVKVLLDSKSQMLDKLTAHE-QLDLYQNIEL 481 Query: 532 PLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILF 591 PL VL+++E G+K++ L + +E+ + + L ++ +++AG+EFN++S KQL +ILF Sbjct: 482 PLANVLAKMEIEGIKVNRATLQDMAEQNKVIIEALTQEIYDMAGQEFNINSPKQLGSILF 541 Query: 592 EKQGIKPL---KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMI 648 EK + PL KKT G ST+ +VLE LA P+ IL+YR + KL+STY L I Sbjct: 542 EKMQL-PLEMTKKTKTGY-STAVDVLERLAPIAPIVAKILDYRQITKLQSTYVIGLQDYI 599 Query: 649 NPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFI-APEDYVIVSADYS 707 G++HT Y Q +T TGRLSS DPNLQNIP+R E+GR IR+AF + ED V++S+DYS Sbjct: 600 -LADGKIHTRYVQDLTQTGRLSSVDPNLQNIPIRLEQGRLIRKAFTPSHEDAVLLSSDYS 658 Query: 708 QIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGL-PLETVTSEQRRSAKAINFGLIY 766 QIELR++AH+S D+ L+ AF EG DIH +TA VFG+ VT+ RR+AKA+NFG++Y Sbjct: 659 QIELRVLAHISGDEHLIAAFNEGADIHTSTAMRVFGIDKAADVTANDRRNAKAVNFGIVY 718 Query: 767 GMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLP 826 G+S FGL+ L I RK+A+ Y+D YFERYPG+ YME +AK++GYVETL RR LP Sbjct: 719 GISDFGLSNNLGITRKQAKSYIDTYFERYPGIKAYMENVVREAKDKGYVETLFKRRRELP 778 Query: 827 DIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVF 886 DI S N R+ AER AIN+P+QG+AADI+K AMI +D LQA R +M++QVHDE+V Sbjct: 779 DINSRNFNVRSFAERTAINSPIQGSAADILKIAMINLDKALQAGGFRAKMLLQVHDEIVL 838 Query: 887 EVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 EV D++ A+ K + ME L VPL V+ +G++W +A Sbjct: 839 EVPNDELTAIKKLVKDTMEAAVDLAVPLCVDESTGQSWYEA 879 >UniRef50_O51498 DNA polymerase I n=20 Tax=Borrelia RepID=DPO1_BORBU Length = 908 Score = 542 bits (1396), Expect = e-152, Method: Compositional matrix adjust. Identities = 327/930 (35%), Positives = 526/930 (56%), Gaps = 35/930 (3%) Query: 9 LILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L L+D + ++R YH PL N+ GE A G L +I + P H + FD++ Sbjct: 4 LYLIDALNIIFRNYHVMKNYPLLNTQGENVNAFIGFFKTLFFIIKEKNPEHLIITFDSEV 63 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 TFR + + YK+ R PDDL QI + + +P+ + G EADD++ + A++A Sbjct: 64 PTFRKQKYPSYKATRDLPPDDLIPQIGWIKEGLLKAKIPIFEMEGYEADDLLASFAKKAA 123 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNTI--LGPEEVVNKYGVPPELIIDFLALMG 184 K I + DKD+ Q ++ + ++ N+ + E V K+GV I D+LA++G Sbjct: 124 KNNYLTYIISPDKDLLQTMSEYVKILKIENNSFIEMDNEYVTKKFGVNSFQIKDYLAIVG 183 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 D SDNIPG+ G+G K A LL+ LD +Y+ E I K L + KE A+ Sbjct: 184 DRSDNIPGIKGIGAKGAANLLREFKTLDGIYSNLEIIN-------KKHRELLIKEKENAF 236 Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYE----FKRWTADVEAGKWLQAK 300 LSY+L +++ ++++ E ++ +EE++ LF+K+ K + D+ + A Sbjct: 237 LSYELVSLEENLKIP-EIENFALKN-FSEEIISLFEKHSAIALIKTYKKDILKQEKENAD 294 Query: 301 GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDS 360 + T+ D+ + + Y + T ++ L I L+KA + DTET S Sbjct: 295 QKSLFKQEPTTNSLDDINTIDTENVKYRSITTKIE---LDDLIESLKKAKYISIDTETSS 351 Query: 361 LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRER--ALELLKPLLEDEKALKVG 418 LD +A L+G+S + + YIP+ +A +I E+ ++ L E + +G Sbjct: 352 LDTYTAKLIGISISFKEFEGYYIPI-----EAKGKIYIEKNYIIQKFNNLFESNPKI-IG 405 Query: 419 QNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAG 478 QN K+D IL N G FDTM+ +Y++++ + +D LAE++L HK I +E++ Sbjct: 406 QNYKFDYKILKNNGFNPIPPYFDTMIAAYLIDT-NSKVSLDFLAEKYLMHKNIKYEDVIQ 464 Query: 479 KGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLS 538 K N F I+LE A Y++EDAD+T +L ++ K + IEMP V+ Sbjct: 465 KNDN---FANISLEMATSYSSEDADITFRL-FNIFTKKLKEDKLDKLMHEIEMPFNKVII 520 Query: 539 RIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKP 598 +E NG+ +D + L + +EL L +E + + G +FNL+S KQ+ ILFEK +K Sbjct: 521 EMEENGIYLDKEYLKEYGKELGKELEAIENEIIKSIGIDFNLNSPKQMHEILFEKLNLKL 580 Query: 599 LKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTS 658 +K ST +VLE L + + +++YR +AKLKSTYTD L +IN KT R+HTS Sbjct: 581 PEKMKKD--STDIKVLESLREQHESIENLIKYRQIAKLKSTYTDNLIELINYKTNRLHTS 638 Query: 659 YHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLS 718 + Q TATGR++S +PNLQNIP+++E+GR+IR+AF + +SADYSQIEL I+AHLS Sbjct: 639 FIQTKTATGRITSINPNLQNIPIKDEKGRKIRKAFKPENGNIFISADYSQIELAILAHLS 698 Query: 719 RDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLN 778 +D+ L+ AF KDIH TA+++F + + +T RR AK+INFG+IY MS F LA++L Sbjct: 699 QDEVLIKAFENNKDIHTETASKLFKIEEKEITPNLRRIAKSINFGIIYRMSDFRLAKELG 758 Query: 779 IPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAA 838 I ++EA+ +++ YF+ YP + E++ + GY ET+ RR Y+ +I S+N R+A Sbjct: 759 ITKEEAKGFINSYFDSYPKIKEFIINQINFVRNAGYSETILKRRRYIKEINSNNYLERSA 818 Query: 839 AERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAK 898 AER AIN+ +QG+AADI+K AM+ V ++++ ++++QVHDE++ E ++ + V K Sbjct: 819 AERIAINSIIQGSAADIMKIAMVKVFNEFKSKKMESKILLQVHDEMLIESPIEEENEVKK 878 Query: 899 QIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 + +ME L++PL + +G++W + H Sbjct: 879 ILKIMMETAYTLNLPLRANIETGKSWGEIH 908 >UniRef50_UPI0001C17162 DNA polymerase A n=2 Tax=Nostocaceae RepID=UPI0001C17162 Length = 988 Score = 541 bits (1394), Expect = e-152, Method: Compositional matrix adjust. Identities = 364/986 (36%), Positives = 536/986 (54%), Gaps = 84/986 (8%) Query: 9 LILVDGSSYLYRAYHAFPP-----LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 +ILVDG S +R+Y AF L +G PT +G + L +I++ +P AV FD Sbjct: 13 IILVDGHSLAFRSYFAFAKSRAGGLRTKSGIPTNVCFGFMQCLLDVIVKEQPQAIAVAFD 72 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 TFR E +YK++R P+D + L+ +++A+ + ++ G EADD++GTLA Sbjct: 73 LAAPTFRHEADSNYKANRADTPEDFIPDLVNLYDLLEALNIQVITQPGYEADDILGTLAE 132 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPN--ITLIN-------TMTNTI--LGPEEVVNKYGVP 172 + +G V I +GD+D+ QL+ N I+++N + +N I +V K GV Sbjct: 133 TSVCSGYRVKILSGDRDLFQLIDENKGISVLNFTPEALKSSSNGIKEFHTLDVKEKLGVL 192 Query: 173 PELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTM 232 P ++DF AL GD+SDNIPGV G+GEKTA LL L +YA KI G + Sbjct: 193 PTQVVDFKALCGDTSDNIPGVKGIGEKTAVKLLNIYKSLTEIYANINKITGAN------- 245 Query: 233 AAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVE 292 KL +E A+ S LA I TDV + + + ++ +++ + +K EFK++ ++ Sbjct: 246 QQKLIAGQESAFHSQYLAKIVTDVPITIKIQDCHLKGFDTAKIIPILEKLEFKKFLDKIQ 305 Query: 293 --AGKWLQAKGAKPAAKPQET--------------SVADEAPEVTATVI---SYDNYVTI 333 K++ ++ + + S AD + + S + V I Sbjct: 306 EIEKKFIHSQSTSLTGETNNSNTNNLSLDDDLWFFSAADTVNAQKSQTLKQGSSEIKVRI 365 Query: 334 LD-EETLKAWIAKLEK-----APVFAFDTETDSLDNISANLVGLSFAIEPGV--AAYIPV 385 +D E+ L+ + LE+ PV A+DTET LD +ANLVG+ G AYIP+ Sbjct: 366 IDTEDKLRELVNILEQHKDPENPV-AWDTETTDLDPRNANLVGIGCCWGTGENDVAYIPL 424 Query: 386 AHDYL-DAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTML 444 H+ + + L L+ +L K QN K+DR I GI L G+ FD ML Sbjct: 425 GHNITSNLEKNLPLNTVLSTLEKILVSGDYPKTFQNAKFDRLIFKYQGITLDGVVFDPML 484 Query: 445 ESYILNSVAGRHDMDSLAERWLKHKTITFEEI---AGKGKNQLTFNQIALEEAGRYAAED 501 SY+LN H++ LA R+L + +++I +GK + Q T I++ Y + Sbjct: 485 ASYVLNP-DRTHNLTDLALRYLGLQLTEYDDIVQKSGKKERQKTIADISIHTVANYCGKQ 543 Query: 502 ADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTL 561 T QL K+ +L + + ++E PL VL+ +E GV I+ L S+ + Sbjct: 544 VYATWQLVGKLREELNEIPALFKLLVDVEQPLEVVLAEMEHRGVIINSAYLQQLSQHIES 603 Query: 562 RLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGI--KPLKKTPGGAPSTSEEVLEELA- 618 LA LE KA +IAGE+FNL S KQL ILFEK G+ K +K G ST LE+L Sbjct: 604 DLATLEIKATKIAGEKFNLGSPKQLSYILFEKLGLSTKYSRKISTGY-STDAATLEKLQE 662 Query: 619 LDYP-LPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQ 677 +D I+EYR LAKLKSTY D LP ++N KT R+HT+++Q TATGRLSS++PNLQ Sbjct: 663 VDQTGFVDAIIEYRTLAKLKSTYVDALPELVNHKTQRIHTNFNQTATATGRLSSSNPNLQ 722 Query: 678 NIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRAT 737 NIP+R R+IR+AF+ +++V+ADYSQIELRI+AHLS++ L+ A++ +DIH T Sbjct: 723 NIPIRTAFSRQIRKAFLPESGWLMVAADYSQIELRILAHLSQEPMLIQAYSNNQDIHTLT 782 Query: 738 AAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPG 797 A +F E VTSE+RR AK INFG+IYGM +R + + A +++ + +RYP Sbjct: 783 AKLLFD--KEDVTSEERRFAKTINFGVIYGMGVLKFSRSTGVDKNIANEFIQKFNQRYPL 840 Query: 798 VLEYMERTRAQAKEQGYVETLDGRRLY-------LPDIKSSN------------GARRAA 838 V Y+E + QA QGYVET+ GRR Y L +K + G A Sbjct: 841 VFTYLETIKKQAISQGYVETILGRRRYFDFTNKTLQQLKGKDLQEIELNKLKNLGPYDAG 900 Query: 839 AERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAK 898 R+A NAP+QG++ADIIK AM+ + L+ Q ++++QVHDELVFEV + D + Sbjct: 901 LLRSAANAPIQGSSADIIKIAMVRLHEVLRRYQ--AKLLLQVHDELVFEVPPSEWDELQL 958 Query: 899 QIHQLMENCTRLDVPLLVEVGSGENW 924 QI +MEN +L VPL+V++ GENW Sbjct: 959 QIKSVMENAMKLSVPLVVDIHVGENW 984 >UniRef50_Q30R59 DNA polymerase A n=6 Tax=Epsilonproteobacteria RepID=Q30R59_SULDN Length = 902 Score = 541 bits (1393), Expect = e-152, Method: Compositional matrix adjust. Identities = 331/927 (35%), Positives = 517/927 (55%), Gaps = 44/927 (4%) Query: 11 LVDGSSYLYRAYHAFPP-LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKTF 69 ++D + +R+++A P L NS G PTG + G N + +L Q+ + D KG +F Sbjct: 7 IIDTFGFFFRSFYALPQHLKNSQGFPTGLLTGFTNFISTLQKQHDSDYIVFAIDTKGDSF 66 Query: 70 RDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKAG 129 R E+ +YK++R P P +L Q+ + MG L G EADDVI T+ R A++ Sbjct: 67 RKEIDPNYKANRQPPPQELSMQLPIAIEWIDKMGYKTLGFDGYEADDVIATVVRFAKEKS 126 Query: 130 RPVLISTGDKDMAQLVTPN-ITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSD 188 V + + DKD+ QL+ + L++ + ++ +E KYG+ P+ ID+ +++GDS+D Sbjct: 127 YNVRVVSHDKDLFQLIDDGRVVLVDAIKKQVMDEDECFKKYGISPKQFIDYQSILGDSAD 186 Query: 189 NIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQ 248 NIPGV G+G+ A+ LL LD +YA E I L + KL + KE AY+S + Sbjct: 187 NIPGVKGIGKVGAEKLLIEYETLDNIYANIENIKPLG------IQKKLLEFKEQAYMSKK 240 Query: 249 LATIKTDVELELTCEQ--LEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAA 306 L T+ V E+ ++++ P L ++ + E L+A AK Sbjct: 241 LVTLSCSVFESFDFEEFKMDIENP----FLNIYDE------LVKYEQNGILRALNAKNLV 290 Query: 307 KPQETSVADEAPEVTATVISYDNYVTIL--DEETLKAWIAKLEKAPVFAFDTETDSLDNI 364 + + + V N+ +L D + LK +++L + AFDTET LD Sbjct: 291 HVEAVKKVEAEAQTNKKV----NFRAVLIDDAKELKRVLSELRDDTIVAFDTETTGLDYE 346 Query: 365 SANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYD 424 + +LVG SF A Y+P+AH YL +QIS+E A +K + + VG N+K+D Sbjct: 347 NDSLVGFSFCFNEDEAYYVPIAHFYLGVGEQISQEDAKIAIKKIF---NSRVVGHNIKFD 403 Query: 425 RGILANY-GIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQ 483 + + G I D+M+ ++++N + +D L+E+ L+HK ITF+E KG+ Sbjct: 404 LHFVIRFLGEGELDIFADSMILAWLINPESAL-SLDKLSEKLLEHKMITFKESVKKGE-- 460 Query: 484 LTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFEN---IEMPLVPVLSRI 540 TF +ALEEA YAAEDA +TL+L+ ++ ++ K +G ++ E +E P + L ++ Sbjct: 461 -TFASVALEEACNYAAEDAYITLRLYY-LFLEMLKDQGAEHLIEEAKEVEFPFIKTLLKM 518 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK 600 E +G++++ L E L+EL KK +E+A EFN++ST+QL +LFE+ G+ K Sbjct: 519 EMHGIELNSLFLEQFLAEAKDSLSELTKKIYELASLEFNINSTQQLGNVLFEQLGLPTSK 578 Query: 601 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKL-PLMINPKTGRVHTSY 659 KT G ST E+VL L ++ + +LEYR + KL STY + L L K R+HTS+ Sbjct: 579 KTKTGY-STDEKVLNSLLGEHEIIPYLLEYREVYKLYSTYIEPLLKLSQQDKESRIHTSF 637 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSR 719 Q T TGRLSS +PNLQNIP R G +IR+AF+APE ++ DYSQIELR++AH ++ Sbjct: 638 VQTGTTTGRLSSKNPNLQNIPTRTALGTKIREAFVAPEGKKLIGIDYSQIELRLLAHFTQ 697 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 D+ L+ AF + KDIH TA +FG E +R AK +NFGL+YGM L+ L I Sbjct: 698 DRVLVEAFMQDKDIHMQTAIALFG---EEDAPLKRNVAKTVNFGLLYGMGQKKLSETLKI 754 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 EA++ ++ YF +P V Y +KE GYVETL RR Y D +S++ RAA Sbjct: 755 TTAEAKEIIERYFSSFPSVKSYFRSIVDFSKEAGYVETLLKRRRYF-DYESASPMFRAAY 813 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 ER A+N+ QG+A+DIIK +M + ++ E+ +M++Q+HDEL+FEV + + + ++ Sbjct: 814 EREAVNSIFQGSASDIIKLSMNKIHKLIEDEKLNAKMLLQIHDELIFEVDTSEAEILGEK 873 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWDQ 926 +M+N L++PL + G+ W + Sbjct: 874 FKNIMQNIMPLNIPLKASMKIGDKWSE 900 >UniRef50_C5RBK8 DNA polymerase I n=9 Tax=Lactobacillales RepID=C5RBK8_WEIPA Length = 931 Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust. Identities = 350/939 (37%), Positives = 518/939 (55%), Gaps = 72/939 (7%) Query: 9 LILVDGSSYLYRAYHAF----PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 L+L+DG+S +RA++A N G T A+ G N+L +I + P A V +DA Sbjct: 38 LLLIDGNSLAFRAFYALINQVDRFVNHEGLHTNALVGFNNLLDGIIDPFNPDLALVAWDA 97 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 TFR F++YK +R P +L Q EPL MV+ G+ + G EADD+IGT+AR Sbjct: 98 GKTTFRTGKFDNYKGNRDNTPQELVEQFEPLRKMVELHGIKSYELPGFEADDIIGTMARL 157 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI----LGPEEVVNKY-GVPPELIIDF 179 E+ G V I TGD+DM QLV+ +IT+ T P + Y G+ P+ I+D Sbjct: 158 GEENGYSVTIVTGDRDMTQLVSDDITVWVTKKGISEIDHYTPAMIAELYDGLEPKQIVDI 217 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 L GD+SDN PGV G+G KTA L++ + +Y + +++ A KL Sbjct: 218 KGLQGDTSDNYPGVAGIGPKTALKLIKQYHSIPEMYEQIDEMK------ASKQKEKLVNG 271 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 K+ A LS LA I TD + ++ L P E ++ ++ +FK + + Sbjct: 272 KQDAMLSRDLAKILTDAPVTISLSDLNYHGPDYENIIPFYQHLDFKAQLVKLANQGY--- 328 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 P D ++ T + V+ + +L A +++L+ +F E D Sbjct: 329 ------TVPTSGHTKDAEFDINNTTLD----VSAITPASL-AHVSQLKDT--VSFYLELD 375 Query: 360 SLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQ 419 + + AN +G F I Y A +D Q S +K +LED LK Sbjct: 376 NENYHIANPIG--FVIGNQADGYF--ASRDIDLLTQNSP------VKRILEDSTILKNVF 425 Query: 420 NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 N K L GI L+G++FD +L SY+L++ +D+ +LA + +T EE+ GK Sbjct: 426 NAKELYVSLKRLGIALKGVSFDLLLVSYLLDTNDNNNDLGALAHDNDYYAVMTDEEVYGK 485 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLK------------MWPDLQKHKGPLNVFE 527 G ++A AD HL + L H+ ++E Sbjct: 486 G--------------AKFAIPAADADFFEHLGRKAMAINLLREPLLDRLLSHE-QTKLYE 530 Query: 528 NIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQ 587 +IE+PL +L+ +E G+ +D + L +LT RL+ELE+K ++ AG EFN+ S KQL Sbjct: 531 DIELPLTKILADMESTGITVDSEQLLQMRSKLTERLSELEQKIYQQAGHEFNIQSPKQLG 590 Query: 588 TILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLM 647 +LFE+ P+KKT G STS EVLE++ D P+ + IL YR +AK++STY + L + Sbjct: 591 VVLFEEMKYTPIKKTKTGY-STSVEVLEKMG-DVPIVESILAYRQVAKIQSTYVEGLLRV 648 Query: 648 INPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFI-APEDYVIVSADY 706 I+ +VHT Y Q +T TGRLSS DPNLQNIPVR EEGR+IR+AF+ + D+ I+SADY Sbjct: 649 IHGSDSKVHTRYLQTLTQTGRLSSVDPNLQNIPVRIEEGRQIRKAFVPSHSDWQILSADY 708 Query: 707 SQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPL-ETVTSEQRRSAKAINFGLI 765 SQIELR++AH++ DK L AF G+DIH ATA +FG+ E V RR AKA+NFG++ Sbjct: 709 SQIELRVLAHITGDKNLQAAFINGEDIHAATARRIFGIKDDEPVEGNVRRQAKAVNFGIV 768 Query: 766 YGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYL 825 YG+S FGL++ + + RKEA+ ++ YF++YP V ++ + A A+E GYVET+ RR YL Sbjct: 769 YGISDFGLSKNIGVSRKEAKAIIETYFDQYPDVKKWSDDIIASARETGYVETIAHRRRYL 828 Query: 826 PDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELV 885 PDIK+ R+ AER A+N+P+QG+AADIIK AMI V A ++ + M++QVHDEL+ Sbjct: 829 PDIKAKRFNARSFAERTAMNSPIQGSAADIIKIAMIKVQAAIEQAGMQAHMLLQVHDELI 888 Query: 886 FEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 FE ++ + K + ++M++ +LDVPLLV G +W Sbjct: 889 FEAPASEMADLEKLVTKVMDSAVKLDVPLLVSSHVGASW 927 >UniRef50_B1YKA1 DNA polymerase I n=3 Tax=Bacilli RepID=B1YKA1_EXIS2 Length = 865 Score = 538 bits (1387), Expect = e-151, Method: Compositional matrix adjust. Identities = 350/928 (37%), Positives = 513/928 (55%), Gaps = 78/928 (8%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 +N L+L+DG+S YRA+ A PP+T++ G T A YG ML L+ + +PTH V FDA Sbjct: 3 ENKLLLIDGNSLTYRAFFALPPMTDAQGRNTNAAYGFTMMLLKLLEEEQPTHMLVAFDAS 62 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 +TFR ++++ YK R P +LR Q + + +A+G+ ++ + EADD+IGTLA + Sbjct: 63 SETFRHDVYQEYKGSREKTPSELREQFPIVRDICEALGIQMMELHRYEADDLIGTLA-QT 121 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINT---MTNTILGPEEVVNKY--GVPPELIIDFL 180 A R + I TGDKD+ QLVT + ++ T +T+ + EE+ + G+ P +ID Sbjct: 122 MPADR-IRIVTGDKDLLQLVTSQVEVLITKRGITDVLCMTEELFAETYGGLKPIQMIDLK 180 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 LMGD SDNIPGVPG+GEKTA L+ G ++ LY E + G K+ N+ Sbjct: 181 GLMGDKSDNIPGVPGIGEKTAIKLISAYGSVEGLYEHVEDLKG-------KQKEKVVANE 233 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 E+A LS +LATIK DV L++T + L++ + LF+ FK T Sbjct: 234 ELARLSKELATIKLDVPLDVTLDDLQISDVDTQVPYSLFQSLGFKSLTNRF--------- 284 Query: 301 GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDS 360 V +EA + V +T L E+ A + E Sbjct: 285 ----------APVVEEADKEQLNV----QAITSLPEDVTDAVLV-----------VEQLR 319 Query: 361 LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLED---EKALKV 417 D + +++G A PDQI A + P D K+ Sbjct: 320 EDYMEEDIIGFGIA-----------------TPDQIYVASAELVDDPAFRDWIESDHQKI 362 Query: 418 GQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIA 477 + K L +G++L AFD +L + L +++G + S+A ++ E + Sbjct: 363 CLDAKQAAFALRKHGLKL--TAFDDLLLAGYLLNLSGGTTLASIAGHYMLMAP-NEEAVL 419 Query: 478 GKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVL 537 GKG +L L Y AE A + L K+ +L+ ++ ++E +E PL VL Sbjct: 420 GKGAKRLAPADDVLHP---YLAEKARMIELLFPKVKEELKANQ-QFELYETLERPLSGVL 475 Query: 538 SRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIK 597 + +E G+++D L +L RL +LE+ + GEEFN++S KQL ILFEK + Sbjct: 476 AEMEWTGIRVDVGTLQEMQHDLAGRLHDLEQLIYGEVGEEFNINSPKQLGVILFEKMELP 535 Query: 598 PLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHT 657 KKT G ST+ +VLE+L +P+ I+ YR L KL+STY + L +I + G++HT Sbjct: 536 AFKKTKTGY-STAADVLEKLRPLHPVIDHIMLYRELQKLQSTYVEGLQKVIK-EDGKIHT 593 Query: 658 SYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE-DYVIVSADYSQIELRIMAH 716 + Q + TGRLSS +PNLQNIPVR EEGR+IR+AF+ E + + +ADYSQIELR+MAH Sbjct: 594 RFAQTIAQTGRLSSVNPNLQNIPVRIEEGRKIRKAFVPSEPGWSLYAADYSQIELRVMAH 653 Query: 717 LSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQ 776 +S DK L+ AF + DIH TA+ VFG+ VT RR AKA+NFG+IYG+S +GL++ Sbjct: 654 MSEDKTLVQAFLDDADIHTQTASSVFGVAPNDVTGNMRRQAKAVNFGIIYGISDYGLSQN 713 Query: 777 LNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARR 836 LNI RKEAQ ++D YFE +P + +M+ +A+ G+VETL RR +PDI S N R Sbjct: 714 LNISRKEAQDFIDRYFELFPQIKLFMDAAIEKARMNGFVETLMNRRRNIPDINSKNFNLR 773 Query: 837 AAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAV 896 AER AIN P+QG+AADIIK+AM+ V A L+ R R+++QVHDEL+FE +++DA+ Sbjct: 774 GFAERTAINTPIQGSAADIIKKAMLDVHAALEQSPLRARLLLQVHDELIFEAPDEELDAL 833 Query: 897 AKQIHQLMENCTRLDVPLLVEVGSGENW 924 + Q ME +L VPL V+ +G +W Sbjct: 834 KTLVKQAMEQTVQLSVPLRVDGDAGHSW 861 >UniRef50_D2VA69 DNA polymerase I n=1 Tax=Naegleria gruberi RepID=D2VA69_NAEGR Length = 1085 Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust. Identities = 347/1000 (34%), Positives = 536/1000 (53%), Gaps = 92/1000 (9%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 + ++LVDG+ + RAY PPLT+S G PT A+ L +++ + H A+ FD+ Sbjct: 93 EKKILLVDGTPLVVRAYFGTPPLTSSNGTPTNAILTFAKSLIAILKSDEFDHVAIFFDSG 152 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 + R + YK++R P D+L+ Q + + MGL +++ G EADD+I T+AR+A Sbjct: 153 KPSIRKSISSDYKANRKPTEDNLKKQFPICKLLAEKMGLKVISKDGFEADDLIATVARQA 212 Query: 126 --EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALM 183 EK V++S+ DKD+ L N+TL++ MT L ++++ KY +PP+LI +FLAL+ Sbjct: 213 KDEKFNSIVVVSS-DKDLHCLSDTNLTLLDPMTKKKLTMDDIIGKYELPPKLIPEFLALV 271 Query: 184 GDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYA--EPEKIAGLSFRGAKTMAAKLEQNKE 241 GD++DNI GV G+G+K A +LL+ G + + + E + S K+ L+ Sbjct: 272 GDTADNIKGVKGIGKKKAVSLLEQYGSISEILNNLDDENMEKKSREAIKSNIDDLK---- 327 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPA-----AEELLGLFKKYEFKRWTAD------ 290 LS +L + +V L+ + + +V Q + EEL+ + + E Sbjct: 328 ---LSLRLVALDEEVPLDYSLQDFQVDQSSLDFSQNEELIKMLEDLEINSVIKQLKKETD 384 Query: 291 ---------------VEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILD 335 +E+ + + A + + V+D++ ++ Y IL+ Sbjct: 385 KKEKTTKSKSKKKEVIESVVLSEEMSSADVASLKLSHVSDDSK--IGKIVKASEYNIILN 442 Query: 336 EETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAH----DYLD 391 E+ L ++I +++ + F TE L + + G+SF I PG A Y+P ++LD Sbjct: 443 EKELDSFIEQVKISGNVCFSTEICLLSLHNPVMAGISFCISPGQAYYLPFFKGGKVEFLD 502 Query: 392 APDQISRERALELLKP-LLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILN 450 + + + L ++ ++E+ LK+G N+KY +LANYG+ ++ D M+ SY+LN Sbjct: 503 SVNILKESPILSKVRTEIMENPNILKIGHNIKYHIKMLANYGVTVKNFD-DIMVMSYVLN 561 Query: 451 SVAGRHDMDSLAERWL----KHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTL 506 H+MD + E L K I +E+ G GK ++T + + +A + AD+T Sbjct: 562 CGKHGHEMDEIVENVLLLDPKEHIIPEKEVLGIGKKKVTLMEADIVSVVHFACQHADLTK 621 Query: 507 QLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAEL 566 Q + + L K +E IE PLV L+ IE GV +D L E ++ + Sbjct: 622 QAYDVLKSALDKSPKLTQFYEGIEKPLVETLAGIEMKGVFMDEPALVKMENEYREKIKAI 681 Query: 567 EKKAHEIAG--------------------------------EEFNLSSTKQLQTILFEKQ 594 K E AG EEFN++S +QL ++FEK Sbjct: 682 GNKIREDAGYPTIDEDIEIPTSEEEIESMIIEMDEMKQEASEEFNINSNRQLGQVIFEKL 741 Query: 595 GI--KPLKKTPGGAPSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINPK 651 GI K KKT G + EVL++LA + + + K ILEYR L KL STY L INP Sbjct: 742 GIGTKLRKKTKVGDYILNAEVLQKLAAEGHSIAKHILEYRALTKLYSTYISGLRQHINPY 801 Query: 652 TGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQIE 710 T R+HT++ A+T TGRLSS PN+QNIPVR EG++IR+ FI+P +DYVI+ DYSQ+E Sbjct: 802 TKRIHTTFQNALTVTGRLSSVMPNIQNIPVRTAEGKQIRRCFISPSDDYVIMKVDYSQVE 861 Query: 711 LRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSA 770 LRI+AH++ L AF E KD+H TA++VF +PL+ V R AKAINFG+IYGMS Sbjct: 862 LRILAHIANIPVLKNAFKENKDVHAITASQVFNVPLDQVDKSTRNKAKAINFGIIYGMSE 921 Query: 771 FGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKS 830 FGL++++ + + A+ +++ YF++YPG+ YM +T ++ GYV TL RR ++P I+ Sbjct: 922 FGLSKRIGVDTQAAKSFIEQYFKQYPGIKNYMTKTIEFCRKHGYVNTLFNRRCWIPGIED 981 Query: 831 SN-GARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVH 889 G + + ER +IN P+QGT+ADI K AM ++ Q + R RMI+QVHDE+VFEV Sbjct: 982 QGFGGKSSFGERTSINTPIQGTSADITKIAMNSLHKAFQEKGLRTRMIIQVHDEIVFEVP 1041 Query: 890 KDDVDAVAKQIHQLMENC-----TRLDVPLLVEVGSGENW 924 KD+V+ V I +LME T VPL VE W Sbjct: 1042 KDEVETVEPIIKELMEGAAFFGGTNFTVPLTVEATVDSKW 1081 >UniRef50_B0S404 DNA polymerase I n=2 Tax=Finegoldia magna RepID=B0S404_FINM2 Length = 875 Score = 536 bits (1381), Expect = e-150, Method: Compositional matrix adjust. Identities = 327/929 (35%), Positives = 520/929 (55%), Gaps = 71/929 (7%) Query: 10 ILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKTF 69 +++DGSS L+R ++A LT G T ++G +NM S++ + P V FD K TF Sbjct: 6 LIIDGSSLLFRGFYAIRDLTTKDGIHTNGVFGFMNMYYSVMGKINPDLVVVCFDRKEPTF 65 Query: 70 RDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKAG 129 R E + YK +R P++L Q + L ++KAMG+ + + G EADD+ GTLA++A Sbjct: 66 RHEKYSEYKGNRQETPEELIGQFDMLKELLKAMGVSYIDLKGYEADDIAGTLAKQASSKD 125 Query: 130 RPVLISTGDKDMAQLVTPNITLINT---MTNTILGPEEVVNK-YGVPPELIIDFLALMGD 185 V + TGDKD QL+ N ++ T +T T + +V+ + YG+ P+ +ID LMGD Sbjct: 126 YDVYLLTGDKDYLQLIDDNTKVVLTKRGITETKIYDVDVLKEEYGITPKQMIDLKGLMGD 185 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 SDNIPG+ GVGEKTA +Q G ++ LY ++I+G K K+ +++AYL Sbjct: 186 KSDNIPGIDGVGEKTALKYIQKYGSIEGLYEHVDEISG------KKTKQKVIDGEDIAYL 239 Query: 246 SYQLATIKTDVELELT---CEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 S +L TI TDV +L E +++ + L+ + K EF + + Sbjct: 240 SRELGTINTDVPEDLMGFGIEDCTIKEADNDHLIEVLTKLEFNSFIKKL----------- 288 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 P E S +E E Y+N +DE +KA+I K K FA + +D Sbjct: 289 -----PNEES--NEKFE-------YENLDEKVDE--IKAYI-KENKKFTFALFNDDYYVD 331 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 N EP + A D++ R +EL++ E+ ++ + + L Sbjct: 332 N------------EPVIFAI---------YTDKVYITRNVELVESFKEEFESKDINK-LS 369 Query: 423 YDRG----ILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAG 478 +D L YGI++ D ++ Y+L+ + M+ + + + E+I G Sbjct: 370 FDIKPCIYHLMRYGIDISYNYDDVVIIEYLLDPSKTSYSMERSDPKVIGYDFKPLEDITG 429 Query: 479 KGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLS 538 KGK++ T + +E Y + T +L+ K+ + + ++++ ++E+PL+ VL Sbjct: 430 KGKSKKTILESDEKEIDNYVVKYMMFTNKLYEKISE--IEEEDMMHLYRDVEIPLIKVLC 487 Query: 539 RIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKP 598 +E GV + + L E + +EK E+ G++ N++S+KQL +LFE + Sbjct: 488 DMEFTGVCVKKETLVEMGELFEDEIKSIEKSVEELIGKKININSSKQLAEVLFEDLELPV 547 Query: 599 LKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTS 658 +KK G PST +EVLE L+ + + IL YR + KLK+TY D + +I K G++HT+ Sbjct: 548 IKKNKTG-PSTDQEVLEALSGRHEIIDYILRYRTITKLKTTYIDGMVDLI-KKDGKIHTT 605 Query: 659 YHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLS 718 + Q + TGR+SST+PNLQNIP+R EEGR IR+AF+ E +++ ADYSQIELR++A L+ Sbjct: 606 FQQTIAQTGRISSTNPNLQNIPIRTEEGRLIRKAFVPSEGNMLLDADYSQIELRVLADLA 665 Query: 719 RDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLN 778 D+ +L AF G DIHR TA+EVF + + VTS QR +AKA+NFG++YG+ + L++ L+ Sbjct: 666 NDEVMLDAFKHGADIHRKTASEVFKVDFDKVTSLQRSNAKAVNFGIVYGIGDYSLSKDLH 725 Query: 779 IPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAA 838 I RKEA++Y++ Y + Y G+ +YME A KE+GYVET+ RR Y+P++KS N R+ Sbjct: 726 ITRKEAKEYIENYLDTYKGIKQYMEDIVAIGKEKGYVETIMNRRRYIPELKSKNYNVRSF 785 Query: 839 AERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAK 898 ER A+N P+QG+AADIIK AM+ L E+ + ++I+QVHDEL+ + KD+ + V + Sbjct: 786 GERVALNTPIQGSAADIIKVAMVKFYNRLNEEKLKAKLILQVHDELIVDCPKDEREKVLE 845 Query: 899 QIHQLMENCTRLDVPLLVEVGSGENWDQA 927 + +M + L V + ++V S +NW A Sbjct: 846 IMKDVMTHAVDLKVDMKIDVNSADNWYDA 874 >UniRef50_A2C810 DNA polymerase I n=16 Tax=Cyanobacteria RepID=A2C810_PROM3 Length = 986 Score = 535 bits (1379), Expect = e-150, Method: Compositional matrix adjust. Identities = 373/988 (37%), Positives = 530/988 (53%), Gaps = 81/988 (8%) Query: 9 LILVDGSSYLYRAYHAFPP-----LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 L+LVDG S +R+++AF L G PT YG L L P + FD Sbjct: 10 LLLVDGHSLAFRSFYAFSKGGEGGLATKDGTPTSVTYGFLKALLDNCKGLSPQGIVIAFD 69 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKA-MGLPLLAVSGVEADDVIGTLA 122 TFR + +YK++R PD ++ L +++ + LPL G EADDV+GTLA Sbjct: 70 TAEPTFRHQADVNYKANRDVAPDIFFQDLKQLQEILENNLQLPLCLAPGYEADDVLGTLA 129 Query: 123 REAEKAGRPVLISTGDKDMAQLVTP--NITLI--------NTMTNTILGPEEVVNKYGVP 172 +A + G V I +GD+D+ QLV +I ++ + +++ V++K GV Sbjct: 130 NQASRDGWGVRILSGDRDLFQLVDDQRDIAVLYMGGGPYAKSSGPSLIDEAGVLSKLGVI 189 Query: 173 PELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLY-------AEPEKIAGLS 225 P +++ AL GDSSDNIPGV GVG KTA LL+ G LD +Y AE EK + + Sbjct: 190 PNKVVELKALTGDSSDNIPGVKGVGPKTAITLLKENGDLDGIYNALAEVEAEGEKASRGA 249 Query: 226 FRGAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFK 285 +GA + +KL +++ AYLS LA I D+ L +LE+ + L E Sbjct: 250 IKGA--LKSKLSNDRDNAYLSLHLAEILVDIPLP-KAPRLELGSVDNDGLTDRLSSLELN 306 Query: 286 RWTADVEAGKWLQAKGAKPAAK----PQETSVADEAPEV-TATVISYDNYVTILD----- 335 V + + G A + P +++ + PE T T +S DN L+ Sbjct: 307 SLVRQVPSFVATFSSGGFKANRHELEPSKSATSPVEPESSTETKVSNDNEQPALEPQLIT 366 Query: 336 -----EETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVA--AYIPVAHD 388 +E +K + ++ A DTET +L+ A LVGL G+ AYIP+ H Sbjct: 367 NPEELQELVKRLMGYRDRLKPVALDTETTALNPFCAELVGLGVCWGEGLQDLAYIPIGHH 426 Query: 389 ------YLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDT 442 +A Q+ E L+ + P L K QN KYDR IL +G+ L G+ DT Sbjct: 427 PPAELLEAEAACQLPLEAVLKAIAPWLASNDHPKALQNAKYDRLILLRHGLALEGVVMDT 486 Query: 443 MLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDA 502 +L Y L A +H ++ +AER K F E+ GKG+ TF +A+ A Y D Sbjct: 487 LLADY-LRDAAAKHGLEVMAEREFKITPTGFSELVGKGQ---TFADVAIPTASLYCGMDV 542 Query: 503 DVTLQLHLKMWPDLQKHKGPL-NVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTL 561 +T +L L++ L+ L + E +E PL PVL+ +E G++ID L S EL Sbjct: 543 HLTRRLALRLRAQLEDMGAKLLPLLEQVEQPLEPVLALMEATGIRIDLPYLQTLSVELGE 602 Query: 562 RLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGI--KPLKKTPGGAPSTSEEVLEELAL 619 L LE++A E AG +FNL+S KQL +LFE G+ K ++T G ST VLE+L Sbjct: 603 TLERLEEQAREAAGVDFNLASPKQLGELLFETLGLNRKKSRRTKTGW-STDANVLEKLEA 661 Query: 620 DYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNI 679 D+P+ ++LE+R L+KL+STY D LP ++ +TGRVHT ++QAVTATGRLSS++PNLQNI Sbjct: 662 DHPVVPLVLEHRVLSKLRSTYVDALPQLVESETGRVHTDFNQAVTATGRLSSSNPNLQNI 721 Query: 680 PVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAA 739 P+R E RRIR+AF+ E++ ++SADYSQIELRI+ HLS ++ L AF G D+H TA Sbjct: 722 PIRTEFSRRIRKAFLPQENWQLLSADYSQIELRILTHLSGEEVLQEAFRNGDDVHALTAR 781 Query: 740 EVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVL 799 + L + V+S++RR K INFG+IYGM A AR + + EA+ ++ Y +RY V Sbjct: 782 LL--LDKDEVSSDERRLGKTINFGVIYGMGAQRFARSTGVSQAEAKDFLSRYKQRYAKVF 839 Query: 800 EYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNG----------------ARRAAAE--- 840 ++E A +GYVETL GRR P NG ARR E Sbjct: 840 TFLELQERLALSEGYVETLLGRR--RPFHFDRNGLGRLLGKDPMDIDLDVARRGGMEAQQ 897 Query: 841 -RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 RAA NAP+QG++ADIIK AM+ + L A R+++QVHDELV EV ++ V + Sbjct: 898 LRAAANAPIQGSSADIIKVAMVQLQEKLTAADLPARLLLQVHDELVLEVDPTALEDVQQL 957 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWDQA 927 + Q ME L VPL+VE G G+NW +A Sbjct: 958 VVQTMEKAVELSVPLVVETGIGDNWMEA 985 >UniRef50_C8W7U1 DNA polymerase I n=3 Tax=Coriobacteriaceae RepID=C8W7U1_ATOPD Length = 912 Score = 535 bits (1379), Expect = e-150, Method: Compositional matrix adjust. Identities = 342/937 (36%), Positives = 500/937 (53%), Gaps = 65/937 (6%) Query: 5 PQNPLILVDGSSYLYRAYHAF-PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 P+ + ++DG+S ++RA+HA P+ G PTGA++G NM L+ + P FD Sbjct: 26 PRRTIAVIDGNSLMHRAFHAIRQPMAAPDGTPTGALFGFFNMFIKLVESFSPDGVICAFD 85 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 R ++ YK+ RPPM L AQ + ++K + +P+ + G E DD++GTLAR Sbjct: 86 KGKPQIRIDMLPQYKAQRPPMDPALHAQFPVVKELLKTLDVPVCQLEGWEGDDILGTLAR 145 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKY-GVPPELIID 178 E G +L+ TGD+DM QL T N+ +++T +I+ PE V + Y G+ PEL+ D Sbjct: 146 RGEAEGYQMLLFTGDRDMYQLSTENVKIVSTRKGVSDVSIMTPETVADLYAGITPELVPD 205 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 F L GDSSDNIPGVPG+G K A AL+ G LD + A +++ G + L Sbjct: 206 FYGLKGDSSDNIPGVPGIGPKKAAALIVEYGSLDEVIAHADEVKG-------KVGENLRA 258 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 + + A LS ++ATI+TD L++ + + +++ F F T+ + Sbjct: 259 HIDDALLSRKVATIRTDAPLDINLDDAKFPTFDPNDVVKAFSALGFTGMTSRLAR----M 314 Query: 299 AKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTET 358 A G+ Q S P + + + D + + WI E + +T Sbjct: 315 AGGSASGVTAQTASATPALPIPSEFLQAGDASAALTAALENQEWIGVAEDSAA-----DT 369 Query: 359 DSLDNISANL------VGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDE 412 +L ++S L L F E AA + + + A D + K LL + Sbjct: 370 GALFSLSHTLWVSTEKALLKFEGENATAALLRILREARVAADDV---------KALLHEV 420 Query: 413 KALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTIT 472 + + K D + + + FDT + +Y+L S D++ L E + Sbjct: 421 SPVDSSEPQKLDIETIDSDRL------FDTGVAAYLLESDRSSFDINGLVELYF------ 468 Query: 473 FEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMP 532 G + T ++I AA L L+ G L +F ++EM Sbjct: 469 -----GSELPEPT-DEIPAAALRAVAARALVPVLTKKLE-------DDGSLELFTSLEMQ 515 Query: 533 LVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFE 592 L+PVL+ +ER G+ +DP+ L S +L +A+ H+ AGE+FNL S QL ILF+ Sbjct: 516 LLPVLAAMERRGLYVDPQKLAEQSAQLGEDIAQRVASIHQTAGEDFNLDSPSQLSHILFD 575 Query: 593 --KQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINP 650 K LKKT G ST+ +VL ELA +Y + +LEYR AK+KSTY D LP +I Sbjct: 576 VLKLPTYGLKKTRTGFYSTNAKVLGELAQEYQIVADVLEYRERAKIKSTYLDALPSLIRG 635 Query: 651 KTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIE 710 R+HT+ +Q VTATGRLSS+DPNLQNIP R+E G R+R AF PE V ++ DYSQIE Sbjct: 636 DK-RIHTTLNQTVTATGRLSSSDPNLQNIPTRSELGHRVRTAFTVPEGSVFLACDYSQIE 694 Query: 711 LRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSA 770 LR++AHLS D+ L+ AF G D H ATAA VFG+P+E VT R AKA+NFG++YG A Sbjct: 695 LRLLAHLSADEHLVAAFNSGADFHAATAARVFGVPVEEVTPALRSRAKAVNFGIVYGQQA 754 Query: 771 FGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKS 830 FGLA L I RKEAQ+ +D YF+ YPGV Y++ + A E GY T+ GR+ ++ + Sbjct: 755 FGLATSLKISRKEAQEMIDRYFDAYPGVRAYLDDSVRTAHECGYAITMYGRKRHIREFNQ 814 Query: 831 SNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHK 890 SN A ER A+N PMQG+AADIIK AMI V+ L+ E ++I+Q+HDEL EV + Sbjct: 815 SNRQLIAFGERTAMNHPMQGSAADIIKIAMINVEKRLRDEGLTSKLILQIHDELDLEVPE 874 Query: 891 DDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 +++ V+ + + ME+ L VPL+ +V G NW +A Sbjct: 875 SEIETVSTLVKETMEDVVTLRVPLIADVSYGSNWAEA 911 >UniRef50_B8FU82 DNA polymerase I n=2 Tax=Desulfitobacterium hafniense RepID=B8FU82_DESHD Length = 873 Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust. Identities = 348/935 (37%), Positives = 510/935 (54%), Gaps = 93/935 (9%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 ++++DG+S R ++A P +T + G+PT ++G + ML L+++ KP + V FD T Sbjct: 4 ILILDGNSLANRTFYALPMMTTADGKPTNVLHGFMTMLLRLLLEQKPDYWVVAFDKTKAT 63 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 R E + YK+ R PD L+ Q + L ++ A +P+L G EADD+I T+ AE+ Sbjct: 64 VRIEQYADYKAQRKETPDALKPQFDFLKELLTAFAMPILECPGYEADDIIATVTSLAEQR 123 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEV--------VNKYGVPPELIIDFL 180 I TGD+D QL++P T+ T G EV KY + P IID Sbjct: 124 EWETQIYTGDRDALQLISPRTTVYLTRK----GITEVDAYDEGALYEKYQLRPAQIIDLK 179 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 LMGD+SDNIPGVPGVGEKTA LL G ++ + +KI+G K + L N Sbjct: 180 GLMGDASDNIPGVPGVGEKTALKLLWEYGSVENVLDNIDKISG------KKLQENLRNNT 233 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 + A LS +LAT+ D+ LE+ ++L ++P + KY K A W + Sbjct: 234 DKALLSKKLATMLYDIPLEIDLDRLVYRRPDEKTFTAALDKYVLKS-----VARIWHEHH 288 Query: 301 GAKPAAK--PQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTET 358 GA K P+E V P L E T + W+A+ P + D T Sbjct: 289 GAGEEGKDTPRE-EVLKPWP---------------LRELTGEEWLARF---PQWQADQGT 329 Query: 359 DSLDNISANLVG-------LSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLED 411 L AN G ++ I G ++I ++ DA ++ LLED Sbjct: 330 LVL--TCANTGGNPHWARITAWGIAVGGESFI---LNWTDAAPEVRLA-----FSQLLED 379 Query: 412 EKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTI 471 + K + K +L N I LRG++ D L +Y++N + + L + Sbjct: 380 SEVPKQVADSKVLYSLLLNEEIILRGVSLDIGLAAYLINPTRNKFEPLELVK-------- 431 Query: 472 TFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEM 531 E I G G+ F +A E + D+ + + + G + +E Sbjct: 432 --EYIPGAGE----FANLAEEASALAQVADS----------YKETLEELGLSALLHEMEE 475 Query: 532 PLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILF 591 PL P+L+ +E+ G+ +D + L ELT+ L LE++ + AGE FN++S +QL ILF Sbjct: 476 PLSPILAEMEKQGIAVDVQRLQEFGRELTVELQRLEQEIYADAGETFNINSPQQLGHILF 535 Query: 592 EKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPK 651 EK G+ P+KKT G ST + LEEL + + + +L+YR L+KL STY + L I+ Sbjct: 536 EKLGLPPMKKTKTGY-STDADTLEELRDQHSIVERVLDYRQLSKLMSTYVNGLLAQIH-- 592 Query: 652 TGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFI-APEDYVIVSADYSQIE 710 GRVHT++ Q VTATGRLSST+PNLQNIP+R E GR +R+ F E +V++SADYSQIE Sbjct: 593 EGRVHTTFQQTVTATGRLSSTEPNLQNIPIRLELGRLLRKVFTPTQEGWVLLSADYSQIE 652 Query: 711 LRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSA 770 LRI+AH S+D+ L +F+ +D+H TA+EVFG+P+ VT + RR AKA+NFGLIYG++ Sbjct: 653 LRILAHYSQDEVLCESFSLNQDVHTRTASEVFGIPMAEVTKDMRRKAKAVNFGLIYGLTD 712 Query: 771 FGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKS 830 FGL R L +PRKEA+ Y++ YF RY GV Y+E +AKE+G V TL R +P+++ Sbjct: 713 FGLGRDLGVPRKEAKTYIETYFHRYEGVKRYLEEIVVKAKEEGQVRTLLNRLRRIPELRH 772 Query: 831 SNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQP-RVRMIMQVHDELVFEVH 889 N +R ER A+N P+QGTAADI+K AM+ V +A +P R +++QVHDELV EV Sbjct: 773 PNRVQRQFGERIAMNTPIQGTAADIMKLAMLGV---AEALKPYRANLLLQVHDELVIEVA 829 Query: 890 KDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 +D++ VAK + + ME+ L VPL+ + +G NW Sbjct: 830 PEDLEEVAKVVREEMESAFPLSVPLIADCKTGPNW 864 >UniRef50_P59200 DNA polymerase I n=187 Tax=Firmicutes RepID=DPO1_STRR6 Length = 877 Score = 532 bits (1371), Expect = e-149, Method: Compositional matrix adjust. Identities = 360/948 (37%), Positives = 526/948 (55%), Gaps = 96/948 (10%) Query: 4 IPQNPLILVDGSSYLYRAYHAF----PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAA 59 + + L+L+DGSS +RA+ A N+AG T A+YG ML L+ + +P+H Sbjct: 1 MDKKKLLLIDGSSVAFRAFFALYQQLDRFKNAAGLHTNAIYGFQLMLSHLLERVEPSHIL 60 Query: 60 VVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIG 119 V FDA TFR E++ YK R PD+ R Q + ++ MG+ ++ EADD+IG Sbjct: 61 VAFDAGKTTFRTEMYADYKGGRAKTPDEFREQFPFIRELLDHMGIRHYELAQYEADDIIG 120 Query: 120 TLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI-----LGPEEVVNKYGVPPE 174 TL + AE+ G + I +GDKD+ QL T T++ + P+ ++ + G+ P Sbjct: 121 TLDKLAEQDGFDITIVSGDKDLIQL-TDEHTVVEISKKGVAEFEAFTPDYLMEEMGLTPA 179 Query: 175 LIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAA 234 ID ALMGD SDNIPGV VGEKT LL G L+ +Y E I G+ M Sbjct: 180 QFIDLKALMGDKSDNIPGVTKVGEKTGIKLLLEHGSLEGIY---ENIDGMK---TSKMKE 233 Query: 235 KLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAG 294 L +KE A+LS LATI T + + E L P E L G Sbjct: 234 NLINDKEQAFLSKTLATIDTKAPIAIGLEDLVYSGPDVENL------------------G 275 Query: 295 KWLQAKGAKPAAKPQETSVADEAPEVTATV---ISYDNYVTILDEETLKAWIAKLEKAPV 351 K+ G K + S AD A + T+ IS D +L EE++ + + Sbjct: 276 KFYDEMGFKQLKQALNMSSADVAEGLDFTIVDQISQD----MLSEESIFHF-------EL 324 Query: 352 FAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLK-PLLE 410 F + TD NLVG +++ DQ+ LELL+ P+ + Sbjct: 325 FGENYHTD-------NLVGFAWS-----------------CGDQLYATDKLELLQDPIFK 360 Query: 411 D---EKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLK 467 D + +L+V + K + +L +G++L+ AFD L Y+L++V +++ ++A + + Sbjct: 361 DFLEKTSLRV-YDFKKVKVLLQRFGVDLQAPAFDIRLAKYLLSTVED-NEIATIASLYGQ 418 Query: 468 HKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQK---HKGPLN 524 + E GKG + A+ E ++ E L + ++ P L + G L Sbjct: 419 TYLVDDETFYGKGVKK------AIPEREKFL-EHLACKLAVLVETEPILLEKLSENGQLE 471 Query: 525 VFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTK 584 + ++E PL VL+++E G+ + + L E L + +L ++ +E+AGEEFN++S K Sbjct: 472 LLYDMEQPLAFVLAKMEIAGIVVKKETLLEMQAENELVIEKLTQEIYELAGEEFNVNSPK 531 Query: 585 QLQTILFEKQGIKPL---KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYT 641 QL +LFEK G+ PL KKT G ST+ +VLE LA P+ K IL+YR +AK++STY Sbjct: 532 QLGVLLFEKLGL-PLEYTKKTKTGY-STAVDVLERLAPIAPIVKKILDYRQIAKIQSTYV 589 Query: 642 DKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYV 700 L I G++HT Y Q +T TGRLSS DPNLQNIP R E+GR IR+AF+ ED V Sbjct: 590 IGLQDWI-LADGKIHTRYVQDLTQTGRLSSVDPNLQNIPARLEQGRLIRKAFVPEWEDSV 648 Query: 701 IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPL-ETVTSEQRRSAKA 759 ++S+DYSQIELR++AH+S+D+ L+ AF EG DIH +TA VFG+ + VT+ RR+AKA Sbjct: 649 LLSSDYSQIELRVLAHISKDEHLIKAFQEGADIHTSTAMRVFGIERPDNVTANDRRNAKA 708 Query: 760 INFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLD 819 +NFG++YG+S FGL+ L I RKEA+ Y+D YFER+PG+ YM+ +A+++GYVETL Sbjct: 709 VNFGVVYGISDFGLSNNLGISRKEAKAYIDTYFERFPGIKNYMDEVVREARDKGYVETLF 768 Query: 820 GRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQ 879 RR LPDI S N R AER AIN+P+QG+AADI+K AMI +D L A + +M++Q Sbjct: 769 KRRRELPDINSRNFNIRGFAERTAINSPIQGSAADILKIAMIQLDKALVAGGYQTKMLLQ 828 Query: 880 VHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 VHDE+V EV K ++ + K + Q ME +L VPL+ + G W +A Sbjct: 829 VHDEIVLEVPKSELVEMKKLVKQTMEEAIQLSVPLIADENEGATWYEA 876 >UniRef50_A8FKC7 DNA polymerase I n=20 Tax=Campylobacter RepID=A8FKC7_CAMJ8 Length = 879 Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust. Identities = 331/920 (35%), Positives = 499/920 (54%), Gaps = 52/920 (5%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 L ++D + +R Y+A NS G+ +G + G N + SL ++K + D+KGKT Sbjct: 4 LTIIDTFGFFFRLYYALKGFKNSQGQASGMISGFANFIYSLKNEHKSDYIVFALDSKGKT 63 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR E+ +YK +R P P +L QI M++ MG ++ G EADD+I + R E Sbjct: 64 FRSEIDPNYKQNRTPPPPELLEQIPICIEMIEKMGFISVSQEGYEADDIIASFVRTCEDR 123 Query: 129 GRPVLISTGDKDMAQLVTPNITLINT-MTNTILGPEEVVNKYGVPPELIIDFLALMGDSS 187 V I T DKD+ QL+ T I + ++ + KYGV P I DFLAL GDSS Sbjct: 124 DIFVRIITQDKDLYQLIKDGKTSIYSPISKNDYDEAACLEKYGVKPHQIRDFLALCGDSS 183 Query: 188 DNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSY 247 DNIPGV G+G K A+ LL G ++ +Y + R ++ LE KE A+LS Sbjct: 184 DNIPGVKGIGAKGAKTLLDEFGSIEGIYENLTLV-----RNERSRNLLLE-GKENAFLSK 237 Query: 248 QLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAK 307 +LA++ ++E++ E+ P E LL + + E E L+ P K Sbjct: 238 KLASLYENLEVQDLIEK--ATYPDEEPLLKILEILE------HYELNTLLKKLRQNPDNK 289 Query: 308 PQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISAN 367 D+ AT+I DE L + L+K + AFDTET LD A Sbjct: 290 -------DKNLGFKATLIQ--------DENKLFEILNTLDKESIIAFDTETTGLDTKEAK 334 Query: 368 LVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGI 427 +VG SF + A Y+P+ H+YL +QIS + A + ++ + +G NLKYD I Sbjct: 335 IVGFSFCMSENEAFYVPLTHNYLGVGEQISLQSAKKAIEVIF---NHFVIGHNLKYDFKI 391 Query: 428 LAN-YGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTF 486 + N +G+ L DTM+ +++ N + R +MD LA R ++T+ FE + KG+N F Sbjct: 392 IQNNFGLNLPQKYADTMILAWLKNP-SLRVNMDDLALRLFNYETLHFESLVKKGEN---F 447 Query: 487 NQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPL-NVFENIEMPLVPVLSRIERNGV 545 + LE+A +YAAEDA +TL+ +L +L+ PL + +N E + ++ +E NG+ Sbjct: 448 ASVELEKACKYAAEDAYITLRFYLYFLKNLET---PLLELAKNCEFDFIKIIMMMEENGI 504 Query: 546 KIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGG 605 K+D L ++ + L ++ + + + FNL+S KQ+ ILFEK + KK G Sbjct: 505 KLDTNALEILMKKFENEIKNLSEEIYTLCEDRFNLNSPKQVGDILFEKLKLPSGKKGKTG 564 Query: 606 APSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKL-PLMINPKTGRVHTSYHQAVT 664 ST E+VL L +P+ IL+YR LAKL STY + L L + K R+++S+ Q T Sbjct: 565 Y-STDEKVLNALLDKHPVIAKILDYRELAKLYSTYCEPLLKLALKDKNSRIYSSFLQTGT 623 Query: 665 ATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLL 724 ATGRLSS DPNLQNIP + + + F+A + + +S DYSQIELR++AH S D+ LL Sbjct: 624 ATGRLSSKDPNLQNIPAHGQYAKDYKSCFVAKDGFSFISLDYSQIELRMLAHFSEDEKLL 683 Query: 725 TAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEA 784 AFA +DIH TA +FG E R AK+INFGLIYGM L++ L I A Sbjct: 684 NAFANDEDIHARTAIMIFG----ESNYETRSVAKSINFGLIYGMGYKTLSQNLKIEAHLA 739 Query: 785 QKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAI 844 + Y++ YFE + + +Y E + +AK+ G++ TL GR+ Y D +++ + A ER +I Sbjct: 740 KSYIEKYFENFTSIKKYFETVKNKAKQNGFITTLSGRKRYF-DFENAKPMQIAMYERESI 798 Query: 845 NAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLM 904 N+ +QG+AAD+IK AM+ ++ L ++ ++I+Q+HDEL+FEV D + K+ +M Sbjct: 799 NSILQGSAADVIKLAMLEINKELNEDK---KLILQIHDELIFEVKDDLCENFVKKTRDIM 855 Query: 905 ENCTRLDVPLLVEVGSGENW 924 EN +L V L +NW Sbjct: 856 ENIVKLKVKLKTSSSIAKNW 875 >UniRef50_Q04G12 DNA polymerase I n=28 Tax=Lactobacillales RepID=Q04G12_OENOB Length = 903 Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust. Identities = 347/943 (36%), Positives = 517/943 (54%), Gaps = 86/943 (9%) Query: 9 LILVDGSSYLYRAYHA----FPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 L+L+DG+S +RA++A + G T A+ N ++ + P +A V +DA Sbjct: 16 LLLIDGNSLAFRAFYAMYNQLDRMVAHTGLHTNALVAFNNFFDQVVEKMNPDYALVAWDA 75 Query: 65 -KG-KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 KG TFR ++F+ YK R P +L Q L MV G+ + G EADD+IGT + Sbjct: 76 GKGATTFRAKIFDDYKGDRQTTPPELSEQFPYLRKMVDLHGIHSYELPGFEADDIIGTYS 135 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI----LGPEEVVNKYG-VPPELII 177 + AEKAG I TGD+D+ QLVT N+++ T P+ + K+G + P +I Sbjct: 136 KLAEKAGLKTTIITGDRDLTQLVTDNVSVNVTKKGVTELDRYTPKFLAEKWGGITPSQVI 195 Query: 178 DFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLE 237 + +L GD+SD+ PGV VG KTA LL G LD +Y + S + +K + L Sbjct: 196 EMKSLTGDTSDHYPGVTKVGLKTAIKLLNEFGSLDGIYQHID-----SMKTSK-LKENLL 249 Query: 238 QNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWL 297 +KE AY +++LATI+TD +EL ++L Q +EL+ +++ +FK A + + + Sbjct: 250 NDKESAYRAHELATIRTDAPVELEMKELINQPINFQELIPFYEELDFKVQLAKIHS---M 306 Query: 298 QAKGAKPAAKPQETSVADEAPEVTATVISY----DNYVTILDEETLKAWIAKLEKAPVFA 353 Q G + +E +V + E+ A + + NY+T+ F Sbjct: 307 QKAGMVGQDQEEEKNV--QVTELKAANLDHLSEIKNYLTVY-----------------FQ 347 Query: 354 FDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEK 413 D++ ISA +VG + D R LELL + + Sbjct: 348 TDSDNYHTAKISAFVVG--------------------NENDGYFASRDLELLNSSVV--R 385 Query: 414 ALKVGQNLKYDRG------ILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLK 467 L G KY +L G+++ + FD +L SY+L++ + + +LA R+ Sbjct: 386 KLFKGDLPKYVFNAKELIVLLNRLGLQINNLDFDFLLVSYLLDTTDNDNQLATLANRF-- 443 Query: 468 HKTITFE---EIAGKG-KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPL 523 + E E+ G G K ++ N E + A A +LH L H+ Sbjct: 444 --NVFLESDAEVYGSGVKFKIPENN---ETLFSHMANKASTISKLHDPSMKKLSDHQQA- 497 Query: 524 NVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSST 583 ++ IE+PL VL+ +E NG+K+D L +E R+ ELEK+ +E AG+EFN++S Sbjct: 498 ELYRQIELPLSKVLASMEINGIKLDQAELKKLGQEFDQRIFELEKQIYEEAGQEFNINSP 557 Query: 584 KQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDK 643 KQL +LF I P+KKT G ST+ VLEELA YP +IL+YR LAKL STY Sbjct: 558 KQLADLLFAHMKIPPIKKTKTGY-STAANVLEELAEKYPFVGLILQYRQLAKLNSTYVKG 616 Query: 644 LPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFI-APEDYVIV 702 L ++NP ++HT Y Q +T TGRLSS DPN+QNIP R+EEG+RIR+AF+ + E + I Sbjct: 617 LLEVVNPDDSKIHTRYLQTLTQTGRLSSVDPNMQNIPDRDEEGKRIRKAFVPSHEGWEIF 676 Query: 703 SADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPL-ETVTSEQRRSAKAIN 761 +DYSQIELR++AH++ D+ L AF G+DIH ATA +FGL + +T +QRR AKA+N Sbjct: 677 GSDYSQIELRVLAHVTGDENLKKAFESGEDIHAATARSIFGLSTDQKITFDQRRRAKAVN 736 Query: 762 FGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGR 821 FG++YG+S FGLA++L R E ++ + YF +P V +++ A A +QGYVET+ R Sbjct: 737 FGIVYGISDFGLAQRLGTSRIEGKEIIQTYFHEFPKVKNWIDSIIALAHKQGYVETIAQR 796 Query: 822 RLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVH 881 R YLPDI S N R+ AER A N P+QG+AADIIK AMI + L + +M++QVH Sbjct: 797 RRYLPDIHSKNFNLRSFAERTATNTPIQGSAADIIKIAMIKMQQALDDNHLKAKMLLQVH 856 Query: 882 DELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 DEL+FE K ++D + + + ++M++ +L+VPL VE G NW Sbjct: 857 DELIFEAPKQEIDILEELVPKVMDSAVKLNVPLRVEAHHGVNW 899 >UniRef50_B1C859 DNA polymerase I n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C859_9FIRM Length = 888 Score = 527 bits (1358), Expect = e-148, Method: Compositional matrix adjust. Identities = 323/939 (34%), Positives = 520/939 (55%), Gaps = 70/939 (7%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 + L+++D S +Y+ + P+ + G T A+YG LN++ LI KP + FD Sbjct: 2 KKKLVIIDAYSIIYKCFFGVRPMHSPKGISTNAVYGFLNIILKLISDEKPNYLYAAFDKG 61 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 K FR + + YK+ R MP++LR QI + ++ A + L V EADD+IG+++ A Sbjct: 62 HKNFRHDKYADYKAGRQSMPEELREQIPYIERLLDAANIISLKVDDYEADDIIGSVSEVA 121 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVN------KYGVPPELIIDF 179 +K G ++ TGD+D QLV+ + ++ + + EV+N KY + P+ +ID Sbjct: 122 DKEGIDTVVITGDRDSFQLVSEHTKILYSKRG--ISDIEVINEDYLKEKYNLTPKQMIDL 179 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 ALMGD SDNIPGV GVGEKTA LL+ LD +Y E+I G + KL + Sbjct: 180 KALMGDKSDNIPGVKGVGEKTALNLLEKYSDLDGVYEHIEEIKG-------KLQEKLIND 232 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 K+ A+LS L TI+ +++++L + EE + + ++ + K + Sbjct: 233 KDNAFLSKDLGTIEVNMDIDLDLNEECNFNFENEEFISILRELDLKSIIKKLGVKANDTR 292 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVT-ILDEETLKAW------IAKLEKAPVF 352 + K K + + +E ++ IS D + I D+++L + + ++ A +F Sbjct: 293 EDNKENEKDDFSHIKEEYKTISKD-ISLDEVLNNIKDKKSLSVYFVLSDDLKTIKSAMIF 351 Query: 353 AFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDE 412 + D+ +++ +S ++ + V H++ D Sbjct: 352 ----DKDNFYLYDSSVSDISELVKIMRSGLDIVTHNFKDV-------------------- 387 Query: 413 KALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTIT 472 KV + YD I R FD L Y+LN R+ ++ +++++L I Sbjct: 388 --YKVFVSQGYD-------DIHCR---FDIYLGGYVLNPSDERYSLEVMSKKYL---DID 432 Query: 473 FEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLK-MWPDLQKHKGPLNVFENIEM 531 EE G+ Q +F + +E+ +Y + L ++ + K + ++++NIE Sbjct: 433 LEEEKGEAVQQ-SF--LDIEDNNKYNMQMKKAKSIYSLAGIFKEKIKEEEMEDLYQNIEH 489 Query: 532 PLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEE--FNLSSTKQLQTI 589 L+ VL +E G K+D L + R+ +L + E AGE+ FN++STKQL + Sbjct: 490 KLMYVLGDMELEGFKVDLNTLEELGVDFDKRVEDLTRNIREAAGEDEDFNVNSTKQLGHV 549 Query: 590 LFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMIN 649 LF+K G+ LKKT G ST+ EVLE+L +P+ +I++ R ++KL STY L +I+ Sbjct: 550 LFDKMGLPALKKTKTGY-STNIEVLEKLRDHHPIIPMIIDLRQISKLNSTYVKGLVSLID 608 Query: 650 PKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQ 708 T ++H++++Q +T TGR+SS++PNLQNIPVR EEGR IR+ FI+ E+ V+V ADYSQ Sbjct: 609 KDTNKIHSTFNQTITTTGRISSSNPNLQNIPVRTEEGRIIRKVFISSSENNVLVDADYSQ 668 Query: 709 IELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGM 768 IELR++AH+S+D+ L+ +F +DIH TA+EVF +P++ VTSE R SAKA+NFG++YG+ Sbjct: 669 IELRVLAHISKDEKLINSFKNNEDIHTRTASEVFNVPIDEVTSEMRSSAKAVNFGIVYGI 728 Query: 769 SAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDI 828 S FGLA+ L+I RK+A++Y+D Y +YPGV +YME AKEQGYV T+ RR Y+ +I Sbjct: 729 SDFGLAKGLSIARKDAKEYIDTYLSKYPGVCKYMEDIVVTAKEQGYVTTMFNRRRYINEI 788 Query: 829 KSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEV 888 S N R+ ER A+N P+QG+AADIIK AM+ V L + + ++I+QVHDEL+ + Sbjct: 789 YSKNFNVRSFGERTALNTPIQGSAADIIKLAMVNVQNELNKRKLKAKLILQVHDELIIDT 848 Query: 889 HKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 ++V+ V + MEN + PL ++ G+ W +A Sbjct: 849 PMEEVEEVKALLKDKMENVVDMSCPLKADISVGKTWFEA 887 >UniRef50_C8PHS8 DNA polymerase I n=2 Tax=Campylobacter RepID=C8PHS8_9PROT Length = 938 Score = 527 bits (1357), Expect = e-148, Method: Compositional matrix adjust. Identities = 331/957 (34%), Positives = 508/957 (53%), Gaps = 63/957 (6%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 + ++D + +R Y+A L G+P+G + G + + +L ++K + D+KGKT Sbjct: 4 ITIIDTFGFFFRLYYAMSGLKTKDGKPSGMVSGFASFIANLSKEFKSDYIIFALDSKGKT 63 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR ++ +YK++R P L Q+ M++ MGL L G EADD+I ++ ++ A Sbjct: 64 FRSDIDPNYKTNRQAPPPALLQQLPVCIEMIEKMGLYSLGREGYEADDLIASVVKKY-GA 122 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSD 188 + I T DKD+ QL+ N+ + + + G EE + +YGV PE I+DFLA+ GDS+D Sbjct: 123 THKINIVTSDKDLYQLIGENVKIYSHGKKMLYGREECLQRYGVYPEQIVDFLAICGDSAD 182 Query: 189 NIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQ 248 NIPGV G+G+K A+ LL G LD +Y+ +++ L + K+ AY+S + Sbjct: 183 NIPGVRGIGDKGAKKLLDEWGSLDEIYSNLDRLP------QNKQREYLIEGKQSAYISKR 236 Query: 249 LATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGK------WLQAKGA 302 LAT+ ++E+ + QQ ++ + K Y R + + + W + KGA Sbjct: 237 LATLYDELEIPPLEDAKFPQQNPLFKIREILKDYALNRLLSALSLQEQNGLDLWGEGKGA 296 Query: 303 KPAAKPQETSVADEAPEVT---------------------ATVISYDNY----------V 331 + E + + S N + Sbjct: 297 GAKSSVLGAGGKGAGAESSRGGSILGAAVGGLDGQNSIPGGSACSEKNSESAFKTPFEPI 356 Query: 332 TILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLD 391 I D L ++ + +FDTET S+D+ SA +VG SFA A Y+P+AH YL Sbjct: 357 CITDAVELARLCESIDAETLVSFDTETTSIDSKSAKIVGFSFAFNEERAYYVPLAHSYLG 416 Query: 392 APDQISRERALELLKPLLEDEKALKVGQNLKYDRGILAN-YGIELRGIAFDTMLESYILN 450 AP QIS + A + L + VGQNLKYD I+ N + IE DTM+ +++L+ Sbjct: 417 APAQISSDAAKAAIDSLF---RGYVVGQNLKYDFEIVKNNFNIEPPARFADTMVLAWLLD 473 Query: 451 SVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHL 510 A MDS++ R+L ++T+ F ++ KG+ TF + L+ A YA+EDA VTL+L+ Sbjct: 474 P-ANAVGMDSISPRYLGYETVHFGDVVKKGE---TFASVELDAATIYASEDAWVTLRLYF 529 Query: 511 KMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKA 570 K+ L+ + + +E P V VL +++R G+KID +++ L L + Sbjct: 530 KLKGLLEP--ALFKLAQELEFPFVRVLWQMQRCGIKIDVEMIKRLIGRNEKSLRALTDEI 587 Query: 571 HEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEY 630 +E+ GE+FN++S QL +LFE+ G+ K+T G ST E VL++L +P IL+Y Sbjct: 588 YELCGEQFNINSPAQLGAVLFERLGLPAAKRTKTGY-STDESVLKDLTALHPAVGKILDY 646 Query: 631 RGLAKLKSTYTDKL-PLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRI 689 R L KL+STY + L L + RV +++ Q TATGRL+S +PNLQNIP R + + Sbjct: 647 RELFKLQSTYCEPLLQLALADAQNRVRSNFLQTGTATGRLASKNPNLQNIPARGTFAKNV 706 Query: 690 RQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETV 749 R F+A Y ++S DYSQIELR++AH SRD LL AF +DIH TA +FG Sbjct: 707 RDCFLAEGGYSLISLDYSQIELRLLAHFSRDPALLAAFRADEDIHARTAISIFG----DA 762 Query: 750 TSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQA 809 R AK+INFGLIYGM A L+ L I R EA+ Y++ YF + + E+++ ++ A Sbjct: 763 QPAHRTIAKSINFGLIYGMGAGKLSDSLGIARAEAKGYIERYFAAFSTIKEFLQSIKSDA 822 Query: 810 KEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQA 869 K GYV TL GRR Y + N A+ ER A+N QG+AADIIK+AM+ + L Sbjct: 823 KADGYVSTLFGRRRYFDFANARNNMVYASYEREAVNTKFQGSAADIIKKAMVDISPLLNG 882 Query: 870 EQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 E R+I+Q+HDEL+FEV D + ++M++ L+VPL + + W + Sbjct: 883 E---ARLILQIHDELIFEVRDDLAQGFGARAQEIMQSAASLNVPLKTSLNIAKRWGE 936 >UniRef50_D2QFD0 DNA polymerase I n=3 Tax=Bacteria RepID=D2QFD0_9SPHI Length = 1024 Score = 525 bits (1353), Expect = e-147, Method: Compositional matrix adjust. Identities = 282/624 (45%), Positives = 411/624 (65%), Gaps = 20/624 (3%) Query: 313 VADEAPEVTATVISYDNYVTILDEETLKAWIAK-LEKAPVFAFDTETDSLDNISANLVGL 371 + + PE T++S + ++D L+A + L + FD+ET ++D + A+LVGL Sbjct: 413 IDENQPERRKTILSVKHDYRLVDTAELRASLVHYLSQQESLCFDSETTAIDPVEADLVGL 472 Query: 372 SFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANY 431 SFA G A Y+PV D +A + ++ KP+ E+ KVGQNLKYD +L Y Sbjct: 473 SFAYRAGEAFYVPVPADRAEA------QAIVDQFKPVFENPTIEKVGQNLKYDLLMLKKY 526 Query: 432 GIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK-GKNQLTFNQIA 490 G+E++G FDTM+ Y++ RH+MD +A +L + + E + GK GK QLT + Sbjct: 527 GVEVQGKLFDTMIAHYLIEPEM-RHNMDMMAMTYLNYSPVEIEALIGKKGKGQLTMRDVD 585 Query: 491 LEEAGRYAAEDADVTLQLHLKMWPDLQK---HKGPLNVFENIEMPLVPVLSRIERNGVKI 547 +++ YA EDAD+TLQL P L+K HK +F+ +EMPLV VL+ +E G+KI Sbjct: 586 IQKVVDYAGEDADITLQLKHAFAPRLEKDNLHK----LFDQVEMPLVQVLTDLELEGIKI 641 Query: 548 DPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGI-KPLKKTPGGA 606 D L S L + + +++++ EIAGE FN+ S KQL +LF+K + K KKT G Sbjct: 642 DTNALSELSATLEVDMRQVQQEIFEIAGESFNIGSPKQLGEVLFDKLKLDKNAKKTKTGQ 701 Query: 607 PSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTAT 666 +T EE+L +L ++ + + IL+YR L KLK+TY D LPL+I+ +TGR+HTS++QAV AT Sbjct: 702 YATGEEILSKLEAEHEIARKILDYRELIKLKNTYVDALPLLISKRTGRIHTSFNQAVAAT 761 Query: 667 GRLSSTDPNLQNIPVRNEEGRRIRQAFI--APEDYVIVSADYSQIELRIMAHLSRDKGLL 724 GRLSST+PNLQNIP+R G+ IR+AF+ PE +VI+SADYSQIELRIMA S D+ +L Sbjct: 762 GRLSSTNPNLQNIPIRTPRGQEIRKAFVPRGPE-FVIMSADYSQIELRIMAAFSGDQTML 820 Query: 725 TAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEA 784 AF G DIH TA++VF + L+ VTS+ RR AK INFG+IYG+S+FGLA++L IPRKEA Sbjct: 821 EAFNNGVDIHTQTASKVFHVGLDEVTSDMRRKAKTINFGIIYGISSFGLAQRLKIPRKEA 880 Query: 785 QKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAI 844 + ++ YF +P V +Y+++ +A+ GY ET+ GRR YL DI S N R AER A+ Sbjct: 881 GQIIEEYFAGFPAVKDYIDQCIEKARGFGYAETILGRRRYLRDINSRNQTDRMFAERNAV 940 Query: 845 NAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLM 904 NAP+QG+AAD++K AMI + ++QAE+ + +MI+ VHDELVF+ H+D++D + ++ ++M Sbjct: 941 NAPIQGSAADMLKIAMIQIHEFMQAERLKSKMILTVHDELVFDAHRDEIDLLRVRVDEIM 1000 Query: 905 ENCTRLDVPLLVEVGSGENWDQAH 928 +N + V + +G+GENW AH Sbjct: 1001 KNAIPMGVKMETGIGTGENWLLAH 1024 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 106/303 (34%), Positives = 162/303 (53%), Gaps = 22/303 (7%) Query: 5 PQNPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 P L L+D + +YRA+ AF P +S G T A++G +N + ++ + KPTH V F Sbjct: 4 PTKKLFLLDALALIYRAHFAFSKSPRISSRGINTSAVFGFMNAMIEVLTKEKPTHIGVAF 63 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 D+ KTFR E F YK++R P+D+ + + +V+AM +P+L + G EADD+IGT+A Sbjct: 64 DSAKKTFRHESFPMYKANRQSQPEDISVAMPYIKQIVEAMHIPMLILDGYEADDIIGTIA 123 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTM----TNTILGPEEVVNKYGVPP-ELII 177 ++A A V + T DKD QLV +I + LG EV+ ++ + E + Sbjct: 124 KKAALADFEVYMMTPDKDYGQLVEEHIHIYKPAFMGKPAEKLGVTEVLERWQIERIEQVT 183 Query: 178 DFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLE 237 D L LMGDS DNIPG+PG+GEKTAQ L+ G ++ L A +++ G KL+ Sbjct: 184 DMLGLMGDSVDNIPGIPGIGEKTAQKLIADFGSVENLIARADELKG-----------KLK 232 Query: 238 QN----KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEA 293 +N + +S +LATI DV + E L + L L + EF++ + Sbjct: 233 ENVVNFAQQGLMSKELATIHLDVPVPFDEEHLRHTEYDKPRLAALLDELEFRQMKTRLLG 292 Query: 294 GKW 296 G + Sbjct: 293 GSY 295 >UniRef50_B1BYY4 DNA polymerase I n=4 Tax=Bacteria RepID=B1BYY4_9FIRM Length = 873 Score = 525 bits (1353), Expect = e-147, Method: Compositional matrix adjust. Identities = 340/924 (36%), Positives = 503/924 (54%), Gaps = 69/924 (7%) Query: 9 LILVDGSSYLYRAYHAFPPL----TNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 L+L+DG+S LYRAY+A + N G PT A+YG NML + I++ P + V FD Sbjct: 7 LVLIDGNSLLYRAYYATAAMGNLMVNKDGIPTNAVYGFANMLEN-ILKGNPEYIVVAFDY 65 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 KTFR++LFE YK R PD+L Q + + A G+ + G E DDVIGT+A Sbjct: 66 GKKTFRNDLFEVYKGTRSATPDELVCQFSMIREYLTAHGIHYQEIEGYEGDDVIGTIASI 125 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI----LGPEEVVNKYGVPPELIIDFL 180 A K V I T DKDM QLV N+++ T + PE+ YG+ P+ + D Sbjct: 126 ASKKRFKVSIVTSDKDMLQLVDDNVSVYLTKKGVAELEKITPEKFKEMYGLIPDQMRDLK 185 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 LMGD +DNIPG+PGVGEKTA LL+ ++ L +++ G M K+ N Sbjct: 186 GLMGDKADNIPGIPGVGEKTALKLLKQYHTIENLNDHLDELKG-------KMGEKIRDNI 238 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 + LS ++ATI DV +EL + Q EL +++Y Sbjct: 239 DQGLLSKKIATIIKDVPMELDLDDFYYQGFDYNELAEFYRRYNMNSLL------------ 286 Query: 301 GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDS 360 + S+A+E + TVI V I+D I + V FD+ Sbjct: 287 --------KRMSLANEDNK-GETVID----VKIVD---CLPIIKRDSSIVVGVFDS---- 326 Query: 361 LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN 420 N +L+ + FAI AY Y+D + I + + + DE K G + Sbjct: 327 --NYHRSLI-VGFAIYNNSEAY------YIDIENAIKCQN----FQNFINDESIEKYGYD 373 Query: 421 LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG 480 +K +G+E++ FD L SYILN + + ++ S+ E + + + EE+ GKG Sbjct: 374 IKKCINAAKWHGLEIKNYVFDLQLASYILNP-SLKDEIRSVCEYYDYYDVLYDEEVYGKG 432 Query: 481 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI 540 + A+ + + + A L K L K + ++++++EMP+ +L+ + Sbjct: 433 AKKKIPETTAIAD---HLIKQAKAIYVLKDKAIEKL-KQENQFDLYKDVEMPVAKILASM 488 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK 600 E G KID VL + + + LEK+ H++A + FN++S KQL +LFE G+ K Sbjct: 489 EYQGAKIDKDVLKDLENQFGKEIEVLEKEIHQLANKNFNIASPKQLGEVLFEDLGLPNGK 548 Query: 601 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 KT G STS ++L +L +P+ +L+YR L+KL STY L I G++HT Y+ Sbjct: 549 KTKTGY-STSVDILNKLKDVHPIINKVLQYRTLSKLYSTYIIGLQEQIFV-DGKIHTIYN 606 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRD 720 QA+T TGRLSSTDPNLQNIPV+ EG+ IR+AFI DY +VS DYSQIELR++AHL+ Sbjct: 607 QALTQTGRLSSTDPNLQNIPVKTAEGKLIRKAFIPEYDY-LVSFDYSQIELRVLAHLANV 665 Query: 721 KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 K L+ AF E KDIHR TA+E+FG+ + V S RR+AKA+NFG+IYGMS FGLA Q+ +P Sbjct: 666 KSLIKAFNEDKDIHRHTASEIFGVDEDEVDSTMRRNAKAVNFGIIYGMSDFGLAEQVGVP 725 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 EA+ ++ YFE YP + YM+ K+ GYV T+ R+ ++ +I N R+ + Sbjct: 726 VNEARNFIKRYFENYPEIKTYMDNNIEFCKKNGYVTTMLNRKRFIREINEKNYMRQELGK 785 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 R A+N+P+QG+AADIIK AMI VD + + +MI+QVHDEL+F+V+K++++ V + + Sbjct: 786 RLAMNSPIQGSAADIIKVAMIKVDELFKKHNLKSKMILQVHDELIFDVYKEELEEVMEVV 845 Query: 901 HQLMENCTRLDVPLLVEVGSGENW 924 + M +++V L E NW Sbjct: 846 AKGMTTAVKMNVELKSEGSYAINW 869 >UniRef50_B5YG86 DNA polymerase I n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YG86_THEYD Length = 838 Score = 524 bits (1350), Expect = e-147, Method: Compositional matrix adjust. Identities = 321/919 (34%), Positives = 509/919 (55%), Gaps = 91/919 (9%) Query: 11 LVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKTFR 70 LVDGS ++YRAYHA L+ S G PT A+YG ML L+ + + FD+ T R Sbjct: 6 LVDGSCFIYRAYHAIKGLSTSRGIPTNAIYGFTRMLLKLLREKNVKYILCAFDSPHPTKR 65 Query: 71 DELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT-LAREAEKAG 129 +++E YK RP P DL QI+ + ++ A+G+ + V G EADD+I T + + A Sbjct: 66 HKIYEEYKITRPETPKDLPVQIDYIKQIIDALGITRIEVPGYEADDIIATAVGVINQFAP 125 Query: 130 RPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSDN 189 +I + DKDM QLV+ N+ + + + I+ E V+ KYGVPPE + DF+AL+GD+ DN Sbjct: 126 LNFIIISIDKDMLQLVSDNVKIYDPINELIIDREYVIKKYGVPPEKLNDFMALVGDAIDN 185 Query: 190 IPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQL 249 IPGV G+GEKTA L++ G ++ + + I L ++ +++N + LS +L Sbjct: 186 IPGVKGIGEKTAANLIKRYGSIENILKNLDIIKPLK------VSDIIKKNIKSLQLSKEL 239 Query: 250 ATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAKPQ 309 ++ D +E+ + L+++Q E+L+ +F++ EF + Sbjct: 240 VILRKDTPIEIKLDDLKIKQQDREKLVQIFRELEFNTLLKQI------------------ 281 Query: 310 ETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLV 369 + D + +V+ + L E + I +EK + + T + D+I A + Sbjct: 282 ---IKDFPNHSSCSVLQLN-----LASENRRNTIELIEKIKEYGKFSVTFNKDSIIAGVN 333 Query: 370 GLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILA 429 G + I + R E+L + LK+ N K L Sbjct: 334 GTLYEI-------------------AFNDTRVNEIL-----SSEILKIIYNAKEALKKLK 369 Query: 430 NYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQI 489 N G++L FD M+ +Y++N G++++D L Sbjct: 370 NSGLKLSPPYFDLMIVAYLINPNRGKYNIDELI--------------------------- 402 Query: 490 ALEEAGRYAAEDADVTL---QLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVK 546 LE G++ ++ +L+ K+ +L K K N++ +IEMPL+ VL +E G+K Sbjct: 403 -LEYTGKFYENAENINFYMFELYEKLNKEL-KEKELENLYFDIEMPLIEVLFDMEETGIK 460 Query: 547 IDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGA 606 ++ + L ++ +++ L ++++K + IAG EFN++S KQL +L+++ G+K +K A Sbjct: 461 VNIEKLETLTKHISMELDKIKEKIYTIAGTEFNINSPKQLAEVLYDRLGLKT-RKRGKKA 519 Query: 607 PSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTAT 666 ST EVLEELA+ + LP ++ YR L KL + Y L INP+T R+HT + Q V T Sbjct: 520 RSTEMEVLEELAIQHELPHEVINYRTLNKLLTGYLIPLRDYINPETKRIHTKWSQTVAGT 579 Query: 667 GRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTA 726 GR+ S++PNLQNIPV+ E +R+ FI Y+ +SADYSQIELR++AH+S D L+ A Sbjct: 580 GRIVSSEPNLQNIPVKGEWAEFLREVFIPENGYMFLSADYSQIELRLLAHMSEDPALIKA 639 Query: 727 FAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQK 786 F +GKDIH ATA+E+F +P VT E RR AK +NFG+ YG+S FGL+ + IP ++A++ Sbjct: 640 FLDGKDIHTATASEIFSIPENAVTDEHRRIAKTVNFGISYGISPFGLSESIKIPYEKAEE 699 Query: 787 YMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINA 846 ++LYF RYP V +++E T + A++ GYV TL GR LP+I S N R +ER A+NA Sbjct: 700 LIELYFLRYPMVRKFIEETISFAQKNGYVRTLFGRIRPLPEINSPNQFLRMQSERMAVNA 759 Query: 847 PMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMEN 906 +QGTAADIIK AMI + L+ E+ ++I+Q+HDE+V EV + ++ V++ + M++ Sbjct: 760 RVQGTAADIIKIAMIRIYNRLKKEKLNAKIILQIHDEIVLEVEQKVIEKVSEIVQNEMKD 819 Query: 907 CTRLDVPLLVEVGSGENWD 925 + L VPL V V SG + + Sbjct: 820 FS-LSVPLEVNVFSGNSLN 837 >UniRef50_B9Y7P1 DNA polymerase I n=2 Tax=Erysipelotrichaceae RepID=B9Y7P1_9FIRM Length = 900 Score = 524 bits (1349), Expect = e-147, Method: Compositional matrix adjust. Identities = 333/931 (35%), Positives = 518/931 (55%), Gaps = 77/931 (8%) Query: 9 LILVDGSSYLYRAYHA--FPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 ++LVDG+S L+RA++A P++ S G PT A+YG M+ + +P V FD Sbjct: 34 MLLVDGNSMLFRAFYATFMRPMSTSTGIPTNAIYGFAMMINKAVQIIQPDAMLVAFDKGK 93 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 TFR ELF YK R PD L Q + ++A G+ ++ +EADD+IG++ ++ Sbjct: 94 HTFRHELFAEYKGGRKETPDALVEQFPIVREYLEAAGIKQFEMTDIEADDIIGSMIKKYP 153 Query: 127 KAGRPVLISTGDKDMAQLV--TPNITLINTMTNTI--LGPEEVVNKYGVPPELIIDFLAL 182 VL S D+DM QL+ T ++ L+ + I + E + K G+ P+ I D L Sbjct: 154 DWDINVLSS--DRDMLQLIDETTSVWLMKKGISDIEEMTVESLKEKMGITPDQIRDLKGL 211 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 MGD+SDNIPG+P VGEKTA LL+ G ++ L A +++ G + +E K+ Sbjct: 212 MGDASDNIPGIPKVGEKTALKLLEQFGTVENLIANTDQLKG-------KLKDNVEAFKDQ 264 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A LS +LATIKTDVE+ E+ E L + +YE + + QA+ Sbjct: 265 ALLSKRLATIKTDVEIPFETEEFTFH-ITPEPLRQFYVRYEMNSLASKLSTQISEQAEAE 323 Query: 303 KPAAKPQETSVAD--EAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDS 360 PA++P T VA+ PE + DN + +LD++ P F Sbjct: 324 APASQPTLT-VAEVRRCPEA----LLQDNAILVLDQDQ-----------PSVYF------ 361 Query: 361 LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN 420 A++ GL+ A + A YIP I R E L L EK K+ + Sbjct: 362 -----ADVHGLALAYQDQ-AVYIP-----------IEDVRQDEALLAYLAGEKT-KIVYD 403 Query: 421 LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK- 479 +K + G+ + G+ D M+ +++ +S + E++ +T+T +E+ GK Sbjct: 404 VKACLHLADGAGLTINGMKIDAMIAAFLCDSTLTSDQ--KIREKFGLTETVTMDEVYGKP 461 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQ---KHKGPLNVFENIEMPLVPV 536 GK +L Q+ + + +QL +W D + K +++F ++EMPL V Sbjct: 462 GKMKLPEPQLQRQLCAQ--------KIQLIDALWKDSEPKLKEMEIVSLFYDVEMPLAAV 513 Query: 537 LSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGI 596 L ++E+ G++ID + L + + + RL L + AGE FN++S KQL +LF+K G+ Sbjct: 514 LYKMEKEGIRIDSQTLDDIARQTQARLDALTDAIYAAAGETFNINSPKQLGEVLFDKLGL 573 Query: 597 KPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVH 656 G STS +VLE+L +P+ +LE+R KL STY + L I+P GR+H Sbjct: 574 P----ASGKKRSTSADVLEKLLGVHPIIADLLEFRKYQKLYSTYAEGLKKYIHPD-GRIH 628 Query: 657 TSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAH 716 T Y+Q T TGRLSST+PNLQNI VR+EE R +R+AF+ E V+V++DYSQIELR++AH Sbjct: 629 TIYNQCATQTGRLSSTEPNLQNISVRDEESREVRKAFLPSEGNVLVASDYSQIELRMLAH 688 Query: 717 LSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQ 776 ++ ++GLL AF DIH TA++VF +PL+ V ++ RR AKA+NFG++YG+S FGL++Q Sbjct: 689 MADEQGLLDAFRHAVDIHTKTASDVFQIPLDQVDAKHRRQAKAVNFGIVYGISDFGLSQQ 748 Query: 777 LNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARR 836 L+I R +A+++++ Y + YP + +YM++ + +E GY T+ GRR +P+I N R Sbjct: 749 LDISRAQAKEFIERYLQSYPNISKYMDQVISFCQEHGYTATMLGRRREVPEIHDKNYMTR 808 Query: 837 AAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAV 896 +RAA+NAP+QG+AAD+IK AMI +D + + + +MI+QVHDEL+F+ ++DA+ Sbjct: 809 EFGKRAAMNAPIQGSAADLIKLAMIRIDKAISEKGLQSKMILQVHDELIFDALPSELDAL 868 Query: 897 AKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 I + ME+ L VPL+ E G+ W +A Sbjct: 869 CAIIQEGMEHAMELKVPLVAETKIGDTWYEA 899 >UniRef50_B0PCZ2 DNA polymerase I n=3 Tax=Clostridiales RepID=B0PCZ2_9FIRM Length = 874 Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust. Identities = 351/933 (37%), Positives = 510/933 (54%), Gaps = 80/933 (8%) Query: 5 PQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 P L+ VDG+S L RAY+ LT GE T +YG L++L ++ + +P AV FD Sbjct: 5 PAVKLLAVDGNSILNRAYYGIKALTTKNGEFTNGIYGFLSILLRVLDEAEPDAVAVAFDL 64 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 + TFR +L++ YK+ R MP +L +Q+EPL ++ A+G ++ G EADD++GTLAR Sbjct: 65 RAPTFRHKLYDGYKAQRKGMPHELASQLEPLKELLGALGFQIVTCEGYEADDILGTLARS 124 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMT------NTILGPEEVVNKYGVPPELIID 178 + + G +I+TGD+D QLV P++++ T +T+ V KYGV P ++D Sbjct: 125 SAETGWDCVIATGDRDSLQLVGPHVSVRLATTKMGQPASTLYDETAVREKYGVEPAQLVD 184 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 ALMGD+SDNIPGV G+GEKTA +L+ +D +YA+ + + + KL + Sbjct: 185 VKALMGDASDNIPGVAGIGEKTALSLIGQYHDIDAIYAQLD-----TLEIKPGVRKKLGE 239 Query: 239 NKEVAYLSYQLATIKTDVELELT---CEQLEVQQPAAEELLGLFKKYEF-KRWTADVEAG 294 KE+AY S +L I D ++ + + V Q A LL + ++ +RW D A Sbjct: 240 GKEMAYTSRKLGEICCDAPIDASPAAYRRAPVDQAKAAALLARLEMFKMMERWGVDPAAA 299 Query: 295 KWLQAKGAKP--AAKPQETSVAD-EAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPV 351 + GA P A +P A+ +AP++ VI KA A L Sbjct: 300 RETAGGGAAPETAREPSRPMRAEADAPDLAQRVI--------------KAGAADL----A 341 Query: 352 FAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLED 411 F D D I+A VAA +P L E L+PLL Sbjct: 342 FGLDGNGD----IAA------------VAAALPDGTLLLSGG---------ETLEPLLAA 376 Query: 412 EKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTI 471 L+V + R + G+ L + FD L +Y+L+ + +D L ++ Sbjct: 377 GVKLRVWSSKPLHR-MAYRRGVHLENVTFDGELAAYLLSPTSAGYDPVQLCAQY------ 429 Query: 472 TFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEM 531 E A +G+ + +A + A A D K+ ++++H+ ++E IEM Sbjct: 430 ATETRALEGEIPEQYAALAAQAAALSALLD---------KLTDEIREHEQEKLLYE-IEM 479 Query: 532 PLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILF 591 PL VL+ +E G +D + L ++ EL R+ E E AG +FNL+S KQL +LF Sbjct: 480 PLARVLAGMECEGFALDTQALRDYGGELDDRIDETHAAIVEYAGYDFNLNSPKQLGDVLF 539 Query: 592 EKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPK 651 K G+ KKT G ST+ +VLE L +P+ ILEYR L+KLKSTY D L ++ P Sbjct: 540 VKLGLPAKKKTKTGY-STNVDVLEALRPQHPIIGEILEYRKLSKLKSTYVDGLLKVVGPD 598 Query: 652 TGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIEL 711 GRV +++ Q T TGR+SST+PNLQNIP+R EEG R+R+ F A + +V ADYSQIEL Sbjct: 599 -GRVRSTFQQTETRTGRISSTEPNLQNIPIRTEEGSRMRRFFTARPGWKLVDADYSQIEL 657 Query: 712 RIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAF 771 R++A L+ D+ ++ AF G+DIH TAA+VFG+P TVT R AKA+NFG++YG+ AF Sbjct: 658 RVLADLADDQNMIAAFQSGEDIHATTAAQVFGMPGGTVTPLMRSRAKAVNFGIVYGIGAF 717 Query: 772 GLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSS 831 L++ + + EA Y+ Y Y GV +YME T A A+E GYV+TL GRR YLP++ +S Sbjct: 718 SLSQDIGVTVSEADSYIKSYLAHYAGVRKYMEDTIAFARENGYVKTLFGRRRYLPELAAS 777 Query: 832 NGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKD 891 N +A ER A N P+QGTAADIIK AM+ V L+ E R R+I+QVHDEL+ E D Sbjct: 778 NKVTQAFGERVARNTPIQGTAADIIKIAMVRVFERLRREGLRARLILQVHDELLVEAPDD 837 Query: 892 DVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 ++D + + ME+ L VPL + G+NW Sbjct: 838 EIDRARAILKEEMEHAIALKVPLEADTNVGDNW 870 >UniRef50_C1A095 DNA polymerase I n=60 Tax=Actinomycetales RepID=C1A095_RHOE4 Length = 915 Score = 520 bits (1340), Expect = e-146, Method: Compositional matrix adjust. Identities = 344/929 (37%), Positives = 497/929 (53%), Gaps = 53/929 (5%) Query: 9 LILVDGSSYLYRAYHAFPP--LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L+L+DG S +RA++A P +G+ T A+YG +ML +L+ +PTH A FD Sbjct: 28 LMLLDGHSLAFRAFYALPAENFKTHSGQATNAVYGFTSMLINLLRDEQPTHLAAAFDVSR 87 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 +TFR +LF YK+ R PD+ + QI+ ++ A+G+P++A G EADDVI TL +AE Sbjct: 88 QTFRADLFPEYKAQRAKAPDEFKGQIDITKDVLGALGIPVMAEEGFEADDVIATLTTQAE 147 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLI----NTMTNTILGPEEVVNKYGVPPELIIDFLAL 182 G VL+ TGD+D QLVT N+T++ T V KY + P DF AL Sbjct: 148 ALGYRVLVVTGDRDSLQLVTDNVTVLYPKKGVSELTRFTQTAVEEKYSLTPSQYPDFAAL 207 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 GD SDN+PG+PGVGEKTA ++ G L L +K+ G + L +N Sbjct: 208 RGDPSDNLPGIPGVGEKTATKWIREYGDLQGLVDNVDKVRG-------KVGDSLRENLAN 260 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 L+ QL + DV L T EQL + E++ LF EFK + A Sbjct: 261 VLLNRQLTEMVRDVPLPYTPEQLVLAPWDREKIHALFDDLEFKVLRDRLFA--------T 312 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 +++P+ A+E EV+ ++ LD E+ V T T Sbjct: 313 LSSSEPE----AEEGFEVSGDALAPGAVAAWLDAHARTG-----ERHGVTVLGTRT---- 359 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 + ++ L+ A G AYI A D+ + L L D K K Sbjct: 360 PFAGDVTALAIAASDGECAYI--AASTATPEDEAA-------LGDWLADASQPKALHEAK 410 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 + L G L G+ DT L +Y++ ++D L+ R+LK + E +G+ + Sbjct: 411 WAIHALRGRGWTLGGLTSDTALAAYLVRPGQRSFNLDDLSLRYLKRELRA--ETSGQEQL 468 Query: 483 QLTFNQIALE-EAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 L + L+ EA A A L L + +L+ + ++ ++E+PL L++IE Sbjct: 469 SLLDDTEQLDAEAAETAMLSAQAVLDLAAALDTELESIESK-SLLSDMELPLTIELAQIE 527 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 G+ +D LH+ ++A+ A+E+ ++ NL S KQLQ +LFE+ + P K Sbjct: 528 ATGIAVDSAHLHDLQSRFASQVADAANSAYEVIDKQINLGSPKQLQVVLFEELDM-PKTK 586 Query: 602 TPGGAPSTSEEVLEEL--ALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 +T E L+ L +P + +L +R ++K T D L L + GR+HT++ Sbjct: 587 KTKTGYTTDAEALQGLFDKTGHPFLEHLLAHRDATRMKVT-VDGL-LKAVAEDGRIHTTF 644 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY-VIVSADYSQIELRIMAHLS 718 +Q V ATGRLSSTDPNLQNIPVRN+ GR IR F+ + + V+++ADYSQIE+RIMAH+S Sbjct: 645 NQTVAATGRLSSTDPNLQNIPVRNDAGREIRDGFVVGQGFDVLLTADYSQIEMRIMAHVS 704 Query: 719 RDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLN 778 D+GL+ AF G+D+H + FG+P+E VT E RR KA+++GL YG+SA+GLA QL Sbjct: 705 GDEGLIEAFNTGEDLHSFVGSRAFGVPIEEVTPELRRRVKAMSYGLAYGLSAYGLASQLK 764 Query: 779 IPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAA 838 I +EA++ MD YF R+ GV +Y+ QA++ GY TL GRR YLPD+ S N RR Sbjct: 765 ISTEEAKQQMDAYFARFGGVRDYLHAVVEQARKDGYTSTLYGRRRYLPDLNSDNRQRREV 824 Query: 839 AERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAK 898 AERAA+NAP+QGTAADIIK AMI V L + RM++QVHDELV EV +++ V Sbjct: 825 AERAALNAPIQGTAADIIKVAMINVQKALAEAGLKSRMLLQVHDELVLEVVASELEEVTA 884 Query: 899 QIHQLMENCTRLDVPLLVEVGSGENWDQA 927 + M L VPL V VG+G +WD A Sbjct: 885 LVKDKMATAIELSVPLDVSVGTGRSWDSA 913 >UniRef50_D1AJI6 DNA polymerase I n=2 Tax=Fusobacteriaceae RepID=D1AJI6_SEBTE Length = 885 Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust. Identities = 344/933 (36%), Positives = 511/933 (54%), Gaps = 74/933 (7%) Query: 10 ILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKTF 69 +++D S+ +YR + A + NS G+ TGA YG +N L +I ++ P + D K Sbjct: 5 VILDTSAIMYRTHFALMGMRNSKGKATGATYGFINTLNLIIKEFSPDYLVACLDVKRSEL 64 Query: 70 R--DELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 + EL E YK+HR MP++L QI + ++ A +P V G EADDVI TLA++ Sbjct: 65 KRTSELTE-YKAHREDMPEELVYQIPKIMEVLDAYNIPKYKVDGYEADDVIATLAKKFSD 123 Query: 128 AGRPVLISTGDKDMAQLVTPNITLI-------NTMTNTILGPEEVVNKYGVPPELIIDFL 180 V I TGDKD+ QL+ NI + + I ++VV GV P+ +ID Sbjct: 124 DNNEVFIVTGDKDLMQLIKDNINIALLGKGDGKSQFKYIQTEQDVVEYLGVRPDQVIDLF 183 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 LMGD SD IPG+ G+G KT L+ G L+TLY E+I G KLE K Sbjct: 184 GLMGDKSDGIPGIQGIGPKTGVELISKYGNLETLYENIEEIKG-------KRKEKLENEK 236 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKW---- 296 E A+LS +LAT+ D+++E E+L+ ++ ++L+ L+K+ EFKR+ D E K Sbjct: 237 ENAFLSRELATVHMDLDVEYNKEKLKYEEKNMDKLIPLYKEMEFKRFLEDAERAKKIANP 296 Query: 297 LQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDT 356 LQ + A + + +V +E E T Y+ T+ E I K+ V FD Sbjct: 297 LQGTLFQTAVQEKIPAVKEEKKE---TPFQYEIIETLEKAEE----ITKIIGDEVTVFDN 349 Query: 357 ETDSLDNISANLVGLSFAIEPGVAAY-IPVAHDYLDAPDQISRERALELLKPLLEDEKAL 415 E L F I Y IP A I ++A + LK + Sbjct: 350 E-------------LGFGISNKEKNYYIPAA---------IISDKA-DFLKKFKD----- 381 Query: 416 KVGQNLK-YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFE 474 +N+ Y+ L G+E + FD ML Y+L + A + D++S+ + E Sbjct: 382 ---KNVNAYNIKELFKSGLEYKDY-FDIMLVWYVLGTEAAQ-DLESII---FSEFQVLLE 433 Query: 475 EIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLV 534 + + K Q ++++ E + + + +L + L+ G NV+ENIE LV Sbjct: 434 KYEVEFKKQ-NMDEVSPERKAEFLTKRSYYMTRLKEILGHRLEAE-GLNNVYENIEKKLV 491 Query: 535 PVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQ 594 PVL+ +E+ G+ IDP + EL LAE+EK + +AGEEFN++S KQL ILFEK Sbjct: 492 PVLADMEKKGILIDPDYFGKYGNELKNNLAEIEKNIYGLAGEEFNINSPKQLSEILFEKM 551 Query: 595 GIKPLKKTPGGAPSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTG 653 + P+KKT G ST EVLE LA + + ILEYRG KL +TY + LP + + + Sbjct: 552 MLDPVKKTKTGY-STDVEVLEVLAAQGVEVAEKILEYRGYTKLLTTYVEPLPKLADSEN- 609 Query: 654 RVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRI 713 R+HT++HQ TATGRLSS++PN+QNIPV+ +EG +IR+ F++ E + +S DYSQIELR+ Sbjct: 610 RIHTTFHQNGTATGRLSSSNPNIQNIPVKTDEGIKIRRGFVSEEGWSFISFDYSQIELRV 669 Query: 714 MAHLSRDKGLLTAFAEGKDIHRATAAEV-FGLPLETVTSEQRRSAKAINFGLIYGMSAFG 772 +A LS D+ L+ A+ + KD+H TA ++ F E V+ E+R AK INF ++YG + FG Sbjct: 670 LAELSEDETLILAYQKDKDLHDLTARKLFFKTDEEPVSREERSIAKVINFSILYGKTPFG 729 Query: 773 LARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSN 832 L+++L IP +A+ Y++ YFE YP V ++ +AK G+VETL G R Y+ I SSN Sbjct: 730 LSKELKIPMGDAKLYINKYFEEYPRVRTFLNSVLQEAKLNGFVETLYGTRRYITGINSSN 789 Query: 833 GARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDD 892 A A+R A+N +QGTAA+IIK M+ + + ++ + M++QVHDEL+FEV + Sbjct: 790 KNIEAQADRMAVNTVVQGTAANIIKIVMVKLYEEFK-DKEDINMLLQVHDELIFEVKNES 848 Query: 893 VDAVAKQIHQLMENCTRL-DVPLLVEVGSGENW 924 VD K+I +MEN +L +V L G+NW Sbjct: 849 VDKYLKEIDNIMENTIKLKNVRLAANGNVGKNW 881 >UniRef50_Q4JW27 DNA polymerase I n=2 Tax=Corynebacterium jeikeium RepID=Q4JW27_CORJK Length = 859 Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust. Identities = 341/931 (36%), Positives = 494/931 (53%), Gaps = 89/931 (9%) Query: 9 LILVDGSSYLYRAYHAFPP--LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L+L+DG S +RA++A P + G+ T A+YG L M +L+ + +PTH A FD G Sbjct: 4 LLLLDGHSLAFRAFYALPAANFSTVGGQHTNAVYGFLGMFLTLMDKEQPTHVAAAFDLSG 63 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 TFR+E F YK+ RP P++ + QIE + ++A+G+ L EADD+I TLA E Sbjct: 64 PTFREESFPEYKAQRPSTPEEFKGQIELIRRTLEALGVTTLDKESYEADDIIATLATEGA 123 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNTI----LGPEEVVNKYGVPPELIIDFLAL 182 K G VLI TGD+D QLVT ++T++ T+ P+ V KYGV P D AL Sbjct: 124 KDGMDVLICTGDRDSLQLVTEDVTVLYTLKGVSELHRFTPQAVEEKYGVTPTQYPDLAAL 183 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 GD+SDN+PGVPGVG KTAQ + G L + + I G + A L +N + Sbjct: 184 RGDTSDNMPGVPGVGPKTAQKWIAKYGSLQGVIDNMDDIGG-------KVGANLRENIDN 236 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 L+ + + D++L + L E LG+F++ +F + A K + + A Sbjct: 237 VVLARDITEMVRDLKLVDDLDALSPHDIDPNEALGMFEELQFGTGLRN-RAFKIMGVEFA 295 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL- 361 AA P V E P+ L AW+ K + V D E +L Sbjct: 296 DSAAVP----VTVEKPK----------------PGKLGAWLKKRTRGTVVDVDGEQLTLL 335 Query: 362 --DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQ 419 DN+ + D D + + A L P +A K Sbjct: 336 DRDNVV-------------------IVQDLADVAPKDEKALAEWLANP-----QATKWLH 371 Query: 420 NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 + K L N G+ L G+ DT L +Y+L + + +R + H+ Sbjct: 372 DSKKAYHTLQNQGLTLDGVEHDTSLAAYLLRPDVRTLSLADVVQRHVGHE---------- 421 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 L E G E A +L + P+++ G ++ ++E+PL +L+ Sbjct: 422 -----------LSE-GATGPERAQAVAELVKALTPEIEA-AGQAELYFDLEVPLALILAA 468 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGE-EFNLSSTKQLQTILFEKQGIKP 598 +E G+ +D L S++ RL E A E+AGE E NLSS KQLQ +LFE + Sbjct: 469 MEHAGIAVDDAALQELSDDYGARLNEEIAAARELAGEPELNLSSPKQLQKVLFETFDLPK 528 Query: 599 LKKTPGG-APSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHT 657 KKT G + + +E ++P ++ +R K+KST D L + GR+HT Sbjct: 529 TKKTKTGYSTAAAELEKLAAQSNHPFLGHLMAHREYQKMKST-IDGLIEAVG-DDGRIHT 586 Query: 658 SYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY-VIVSADYSQIELRIMAH 716 +++Q ATGRLSS+DPNLQNIPVR + GR+IR AF E Y +++ADYSQIE+R+MAH Sbjct: 587 TFNQKGAATGRLSSSDPNLQNIPVRTDAGRKIRAAFTVGEGYETLLTADYSQIEMRVMAH 646 Query: 717 LSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQ 776 LS D GL+ A+A G+D+H + VF +P++ VT E RR KA+++GL+YG+SAFGL++Q Sbjct: 647 LSEDAGLIEAYASGEDLHNYVGSRVFDVPVDEVTPELRRRVKALSYGLVYGLSAFGLSQQ 706 Query: 777 LNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARR 836 L I EA++ MD YFER+ GV Y++ AKE GY ETL GRR YLP++ SSN R Sbjct: 707 LKISAWEAKRIMDNYFERFGGVKRYLDHVVEVAKETGYTETLYGRRRYLPELNSSNRVAR 766 Query: 837 AAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAV 896 AERAA+NAP+QGTAADIIK AM+ VD + +Q R+++QVHDELV EV +++ + Sbjct: 767 ENAERAALNAPIQGTAADIIKLAMLRVDREITRQQLASRVLLQVHDELVVEVAPGELEQI 826 Query: 897 AKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 + + + M+ +L VPL V G+G+NWD A Sbjct: 827 TELVEREMDAAAQLRVPLDVSAGTGDNWDLA 857 >UniRef50_Q7VGK4 DNA polymerase I n=8 Tax=Campylobacterales RepID=Q7VGK4_HELHP Length = 912 Score = 517 bits (1332), Expect = e-145, Method: Compositional matrix adjust. Identities = 325/930 (34%), Positives = 519/930 (55%), Gaps = 35/930 (3%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 N L ++D + +R+++A PPL N G PTG + G N+L+SL T+ A + G Sbjct: 2 NTLSVIDTFGFFFRSFYALPPLKNKEGFPTGLLVGFCNLLQSLYKDPSCTYLAFALEGGG 61 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 + R ++++ YK +R P P +L Q+ ++ MG +++ G EADDVI ++ + A Sbjct: 62 ENKRRQIYDAYKRNRQPPPQELLMQLPIAIEWIEKMGFLNISIEGYEADDVIASINKVAN 121 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDS 186 V I + DKD+ QL+ N + + + + E + KYGV P+ ID+ +L+GD+ Sbjct: 122 AQNIVVRIISHDKDLYQLIDENTYIYDPIGKRDIREAECLYKYGVNPKNFIDYQSLVGDT 181 Query: 187 SDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLS 246 SDNI G+ G+G K+AQ L+ G +++LY E+ + L +A L + K A+LS Sbjct: 182 SDNIVGIKGIGAKSAQKLITHFGSIESLY---ERESELEEVVTPRIAHLLREGKNNAFLS 238 Query: 247 YQLATIKTDV--ELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304 +L T+ D+ ++L+ + P ++L KKY+ K + V++ A+ K Sbjct: 239 KKLVTLYDDLLENIDLSKCLMPESNPML-KILDELKKYDLKNIISKVQSPHERYAQ--KR 295 Query: 305 AAKPQETSVAD--EAPEVTATVISYDNYVTILDEET-LKAWIAKLEKAPVFAFDTETDSL 361 +A+ S+ D + E +++ S+ +LD T L+A + + FD E+DSL Sbjct: 296 SAQKGIGSLNDMPDVIESSSSAQSFSFKAHLLDNFTALEAVLDSIPSGAKIGFDCESDSL 355 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 + ANLVG SF + A Y+PV H YL Q++ +A LK + +G NL Sbjct: 356 NMQEANLVGFSFCFDGENAYYVPVGHHYLGVGCQLTHTQAKIALKRIFTYP---LIGHNL 412 Query: 422 KYDRG-ILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG 480 K+D I +E G +D+M+ ++ +S+A +D +W H I+F+ + K Sbjct: 413 KFDLSLIFHTLELEHTGEIYDSMILGWLYDSIAPI-GLDKQMLKWFNHTMISFDSVVAKD 471 Query: 481 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGP--LNVFENIEMPLVPVLS 538 +N F+Q+ + A +YAAEDA T +L+ ++ K + L + +E P + VL Sbjct: 472 EN---FSQVNIAAATQYAAEDAIATFRLYHRLEEVFYKREWSSILELANKLEYPFIKVLL 528 Query: 539 RIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKP 598 +E G+K+D +L + E+ + +++L + E+ GE FNL+S +QL ILF + G+K Sbjct: 529 AMECEGIKVDIPLLESLKEKASEHISQLSAQIFELCGETFNLNSPQQLAHILFNRLGLKA 588 Query: 599 LKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLM----INPKTGR 654 + GG ST E L + +P+ +IL+YR + KLKSTY + PL+ N K R Sbjct: 589 GRSVKGGL-STDERTLLAIIDAHPVIALILDYREVNKLKSTYIE--PLLRFGSANDKH-R 644 Query: 655 VHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIM 714 ++TS+ Q+ TATGRLSS PNLQNIPVR EEGR+IRQAFI+ E + ++S DYSQIELR++ Sbjct: 645 IYTSFLQSGTATGRLSSKSPNLQNIPVRREEGRKIRQAFISKEGHSLISIDYSQIELRLL 704 Query: 715 AHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLA 774 AH +D L+ +F + KDIH TAA +FG+ L +++R AK+INFGLIYGM + LA Sbjct: 705 AHFCKDSSLIESFKQDKDIHFETAARLFGVEL---AAQKRAIAKSINFGLIYGMGSKKLA 761 Query: 775 RQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGA 834 + L I KEA+ Y++ YF +P + ++ + E GY +TL G R Y D K++ Sbjct: 762 QTLQISLKEAKNYIESYFALFPTIKNFLNAQKEFLLENGYSQTLLGHRRYF-DFKNATDF 820 Query: 835 RRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVD 894 +A R IN+ QG+AAD+IK +M + + +M++QVHDEL+FE ++ Sbjct: 821 MKANFLREGINSIFQGSAADLIKLSMCEIHK--RYGHSDFKMLLQVHDELIFEAPQEKAH 878 Query: 895 AVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 A++ Q+M + L+VPL + G+NW Sbjct: 879 IYAQEAAQIMNHIYELEVPLKCGISIGKNW 908 >UniRef50_A5TW64 DNA-directed DNA polymerase I n=10 Tax=Fusobacterium RepID=A5TW64_FUSNP Length = 914 Score = 516 bits (1328), Expect = e-144, Method: Compositional matrix adjust. Identities = 340/947 (35%), Positives = 530/947 (55%), Gaps = 67/947 (7%) Query: 10 ILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKTF 69 +L+D S+ +YRAY A + EPTGA+YG +N L S+I ++KP + A FD K + Sbjct: 5 VLLDVSAIMYRAYFANMNF-RTKNEPTGAVYGFINTLLSIINEFKPDYMAAAFDVKRSSL 63 Query: 70 -RDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 R E++ YKS+R P+DL QI + ++ A + + G EADDV+G+LA++ K Sbjct: 64 KRTEIYSDYKSNRQSAPEDLITQIPRIEEVLDAFNINRYKIEGYEADDVLGSLAKKLAKQ 123 Query: 129 GRPVLISTGDKDMAQLVTPNITLI-------NTMTNTILGPEEVVNKYGVPPELIIDFLA 181 V+I TGDKD++QLV NIT+ T+ ++VVN GV PE I D Sbjct: 124 DIEVIIVTGDKDLSQLVEKNITVALLGKGAEGEKFGTLKNSDDVVNYLGVVPEKIPDLFG 183 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 L+GD SD IPGV +GEK A A+ L+ +Y + + + G ++ L K+ Sbjct: 184 LIGDKSDGIPGVTKIGEKKALAIFSQYDSLEKIYENIDNLKSIDGIGP-SLIKNLINEKD 242 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 +A++S +LA I T++++++ L+ E L L K EFK + + L+ K Sbjct: 243 IAFMSRELAKIFTNLDIDVEESGLQYGMDR-ERLYSLCKALEFKMFIKKL----GLEEKP 297 Query: 302 AKP--------AAKPQETSVADEAP----EVTATV-ISYDN-YVTILDEET----LKAWI 343 P K T V +E E T V +S N V I+D E+ K ++ Sbjct: 298 QNPTLFSSENVGEKKDSTKVVEETINEEIEFTKEVNLSLTNRQVLIIDSESSLNEQKEYL 357 Query: 344 AKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALE 403 A +K +++ +G+ + E Y P+ H L A + I + + Sbjct: 358 ANYKKIASIYYES------------LGIIISTEDK-DFYFPLNHGGLLAKN-IDKNLVVN 403 Query: 404 LLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAE 463 + L D K + Y+ L N GI + + D M+ ++++S + ++ E Sbjct: 404 FISQL--DIKFIS------YNFKALLNLGISFKSMYMDMMIAYHLISSQTKIDPIIAITE 455 Query: 464 RWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPL 523 + K + F+ GK +L I ++ +Y ++ + L ++ ++ L+K Sbjct: 456 -YSKLEPKDFKATFGKVNVEL----ITTQDFSKYLSDISIGILAIYDELNYLLKKEDLYK 510 Query: 524 NVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSST 583 + EN EMPL+PVLS +ER G++ID + N+S EL L +EK +E AGEEFN++S Sbjct: 511 VLMEN-EMPLIPVLSLMERKGIEIDVQYFKNYSVELDKELLRIEKAIYEEAGEEFNINSP 569 Query: 584 KQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEEL-ALDYPLPKVILEYRGLAKLKSTYTD 642 KQL ILF K + KKT G ST VLE+L + Y + +++L+YR L KLK+TY D Sbjct: 570 KQLGDILFVKMNLPSGKKTKTGY-STDVMVLEDLESYGYNIARLLLDYRKLNKLKTTYVD 628 Query: 643 KLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIV 702 LPL+++ + R+HTS++Q TATGRLSS+DPNLQNIPV+ ++G +IR+ FIA E V++ Sbjct: 629 TLPLLVDENS-RIHTSFNQIGTATGRLSSSDPNLQNIPVKTDDGIKIREGFIAGEGKVLM 687 Query: 703 SADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLP-LETVTSEQRRSAKAIN 761 S DYSQ+ELR++ +S+D+ L+ A+ E KD+H TA +F L ETV+ EQR AK IN Sbjct: 688 SIDYSQVELRVLTSMSKDENLIEAYREEKDLHDLTARRIFNLADSETVSREQRTIAKIIN 747 Query: 762 FGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGR 821 F +IYG + FGLA++L IP K+A +Y+ YFE+YP V + + +E GYV+TL GR Sbjct: 748 FSIIYGKTPFGLAKELKIPVKDASEYIKKYFEQYPRVTTFEKEVIEFGEEHGYVKTLFGR 807 Query: 822 RLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVH 881 + Y+ I S N ++ AER A+N +QGTAA+++K+ M+ V L+ ++ + +++QVH Sbjct: 808 KRYISGIDSKNKTIKSQAERMAVNTVIQGTAAEVLKKVMVKVYDVLK-DKEDIALLLQVH 866 Query: 882 DELVFEVHKDDVDAVAKQIHQLMENCTRL-DVPLLVEVGSGENWDQA 927 DEL+FEV K V+ ++ + +M+N +L DV L + + G+NW +A Sbjct: 867 DELIFEVEKSSVEKYSEILADIMKNTVQLEDVKLNININIGKNWAEA 913 >UniRef50_B2KCD2 DNA polymerase I n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KCD2_ELUMP Length = 862 Score = 515 bits (1326), Expect = e-144, Method: Compositional matrix adjust. Identities = 333/922 (36%), Positives = 515/922 (55%), Gaps = 75/922 (8%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 + + + D ++L+R YHA P L+ S G GA+YG + L L+ + KP + AV FD++ Sbjct: 5 KKTIYIADAHNFLHRNYHALPKLSTSQGLEVGALYGFVRWLVKLVEEKKPHYVAVCFDSR 64 Query: 66 G-KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 G T R ++F YK+HR P+ + L Q++ +V MGL + AV G+EADD+IG +A++ Sbjct: 65 GGSTKRKKMFSDYKAHRKPVDEALLTQLQLAREVVSGMGLKVFAVQGIEADDIIGFIAKK 124 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITL--INTMTNTILGPEEVVNKYGVPPELIIDFLAL 182 + G +++T DKD QL+ +I L ++ GP+ V K+ + + + D+LA+ Sbjct: 125 SVAEGADAVLATSDKDALQLLNEHIKLWPAGAAKESLKGPDYVKEKFNIAQKYLTDYLAI 184 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 +GDSSDN+PGV G+G KTA L+ G L+ + E + AG + + K A K+ N+ V Sbjct: 185 VGDSSDNVPGVAGLGPKTAAELINNFGYLEDIIKEAK--AG-NPKIKKGAAQKIIDNEAV 241 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A LS QL T+ ++ ++ T E PA +L LF KYEFK + ++ A Sbjct: 242 AILSKQLVTLDENIPMDFTLEDAVFSPPAPAKLSELFAKYEFKNLLSAFDS--------A 293 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 +P P E + + E+ IS++ V + + K +I E + + D++T L+ Sbjct: 294 RPKNTP-EGELFSQDTEIKQG-ISFNEVVNKIKD---KMFIQTDENFVLISADSQTCCLE 348 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 + D +++E L++ + L +++ LK+ ++K Sbjct: 349 EL-----------------------------DNLTQEELLKI-EELANNKQILKISYDVK 378 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 + L E+ FD L +Y LN A +LA ++L ++ + K+ Sbjct: 379 FTLRALDVTPKEIIN-CFDVRLAAYSLNPGADI-GFKALAAQYL--------DVIIEPKD 428 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 + F + L+ ++ ++ + DL K K +F +E+PL+ VL +E Sbjct: 429 EKEF--LTLQNQYIWSLKEV---------LERDL-KEKDQFKIFNELELPLITVLLAMEE 476 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 GV +D L N S+ L +A ++ ++ A E N++S KQL +LF++ + +KKT Sbjct: 477 IGVLVDKAWLENFSKTLEGEIAAIQNDINKDAQREINVNSPKQLGALLFDQLKLPSVKKT 536 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST EEVL++L +P+ K ILEYR AKLKSTY D L +M+ RVHT Q Sbjct: 537 KTGY-STDEEVLQQLVNLHPIVKKILEYRSNAKLKSTYVDNL-IMLADGNSRVHTYLDQT 594 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKG 722 T TGRLSS+ PNLQNIP+R +GR +R+AF+A ++S DYSQI+LR++AH S+D Sbjct: 595 GTVTGRLSSSSPNLQNIPIRTPKGRMLRRAFVAEGGKTLLSVDYSQIDLRLLAHESQDSV 654 Query: 723 LLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRK 782 L+ AF EG DIH TAAEVFG+ E V+ E R SAKAINFG+IYG GL++ LNI + Sbjct: 655 LVNAFKEGGDIHTKTAAEVFGVMREMVSDEMRSSAKAINFGIIYGQGPMGLSQNLNISVR 714 Query: 783 EAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERA 842 EA++Y+D YF Y GV E++++ A A+E+GYV+TL G YLP+ K +G + A+RA Sbjct: 715 EAKEYIDNYFAVYKGVREWIDKNIALARERGYVKTLLGHIRYLPEFKMGSGHMASFAQRA 774 Query: 843 AINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQ 902 AIN +QG +AD+IK+AM D + + V+M++QVHDEL+FE+ + ++ A I Sbjct: 775 AINTIVQGGSADVIKKAM--ADIFNHYKGTEVKMLLQVHDELIFELPEKNLLKEAAVIKN 832 Query: 903 LMENCTRLDVPLLVEVGSGENW 924 ME+ L VPLL E +G NW Sbjct: 833 KMEHTIELKVPLLAEAKTGVNW 854 >UniRef50_A5CDT3 DNA polymerase I n=2 Tax=Orientia tsutsugamushi RepID=A5CDT3_ORITB Length = 910 Score = 515 bits (1326), Expect = e-144, Method: Compositional matrix adjust. Identities = 329/941 (34%), Positives = 505/941 (53%), Gaps = 77/941 (8%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 M + L+DG +++RAY LT+ G P G +YG M+ ++I ++ P + V Sbjct: 22 MCSFKNKKIFLLDGYPFIFRAYFVNQDLTSHNGNPIGGVYGFATMIMNIISEFNPEYMVV 81 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 VFD FR +++ YKSHRP +P +L+ Q + +VK + + + + GVEADDVI + Sbjct: 82 VFDTGLDNFRHKIYPEYKSHRPELPSELKIQFPLVREIVKYLNINTIEMEGVEADDVIAS 141 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL 180 LA + A ++I + DKD+ QLV + + + + + +E + K GV P + DFL Sbjct: 142 LANKFGNASDEIIIVSSDKDLLQLVNNKVYIYDPIKKQYIREKETIEKLGVRPSQVRDFL 201 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 +L GD SDNIPG+PG+G KTA LL+ L+ + IA R +E+++ Sbjct: 202 SLTGDVSDNIPGIPGIGPKTAIKLLEQFDSLNNILHNYANIASPRHRKL------IEEHR 255 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 ++A LS+QL +K D+ L L+ E L P AE++ L K+ F +A K + + Sbjct: 256 QLAELSWQLVGLKQDLNLNLSVENLRWSPPNAEQIRTLIHKFGFTSLIT--KASKLFKLE 313 Query: 301 GAKPAAK-PQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 + AK P + E+T I ++ + ++ ++A L Sbjct: 314 LSHLIAKYPLSRASNISKIEITNPEI----WLQVKNKAQESGYLAVL------------- 356 Query: 360 SLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALEL-------LKPLLEDE 412 L+ N + ++F+++ +I L A + RA+ + LL D Sbjct: 357 -LEKEKNNYISITFSLDLHKLYFID-----LTAITSKEQNRAIATNPWWKSSIIELLLDS 410 Query: 413 KALKVGQNLKYDRGILANY---GIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHK 469 K+ NLK L N+ I D ML YIL++ Sbjct: 411 SIQKITYNLKELLIFLLNFLRTEITSASCIDDIMLMHYILSA------------------ 452 Query: 470 TITFEEIAGKGKNQLTFNQIALEEAGRYA---AEDADVTLQLHL-KMWPDLQKHKGPLNV 525 GKN L+ N+I Y+ +E+ L+ + +L K+K L+ Sbjct: 453 ----------GKNDLSLNEIIQTYNKSYSEQYSENKVCWLKNTFDNLMSELFKNK-LLHC 501 Query: 526 FENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQ 585 + I++P+ +L IE NG+KI+ +L S +L ++ LE++ ++I G+EFN++S KQ Sbjct: 502 YYEIDLPICYILRNIENNGIKINVPLLKELSAQLKHKIELLEQQIYKICGQEFNIASPKQ 561 Query: 586 LQTILFEKQGIKPLKKT-PGGAPSTSEEVLEELA-LDYPLPKVILEYRGLAKLKSTYTDK 643 L ILF+ + K + + ST EVLE L+ + ++L++R L KL +TY D Sbjct: 562 LGEILFDVLKLPHAKVSQKTKSYSTDSEVLENLSRAGIKIADLLLKWRQLTKLLTTYIDT 621 Query: 644 LPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVS 703 LP IN T R+HT+ Q T T RLSS PNLQNIP+R+E G ++R AF+AP+ I+S Sbjct: 622 LPTQINNNTFRIHTTLLQTSTTTSRLSSHSPNLQNIPIRSEYGLKVRSAFVAPQGSKILS 681 Query: 704 ADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFG 763 ADYSQIELRI+++ + + L F G+DIH +TAA++F + + VT E RR AKAINFG Sbjct: 682 ADYSQIELRILSYFANIEQLKNVFIMGEDIHSSTAAQIFKINADQVTEEHRRKAKAINFG 741 Query: 764 LIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRL 823 +IYG+SAFG+A+QLNI EA +Y++ YF+ YP + +YM+ T+ A E GYV+ + GRR Sbjct: 742 VIYGISAFGVAKQLNISNTEAAQYINHYFQEYPSIRQYMDETKKFAVENGYVKNMIGRRC 801 Query: 824 YLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDE 883 Y+P I SSN R A+RAAINAP+Q TA+DI K AMI + + ++ P +++++QVHDE Sbjct: 802 YIPLINSSNLTTRNFAQRAAINAPIQSTASDIAKIAMIQYEKLIYSKYPAIKLLLQVHDE 861 Query: 884 LVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 LVFE+ + VD I MEN PL VE+ G+NW Sbjct: 862 LVFELPNELVDTACNLIKCTMENIPYFSFPLKVELKIGDNW 902 >UniRef50_D0L9T3 DNA polymerase I n=2 Tax=Corynebacterineae RepID=D0L9T3_GORB4 Length = 949 Score = 507 bits (1305), Expect = e-142, Method: Compositional matrix adjust. Identities = 333/965 (34%), Positives = 502/965 (52%), Gaps = 89/965 (9%) Query: 9 LILVDGSSYLYRAYHAFPP--LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L+L+DG S YRA+ A P + G+ T A+YG +ML +L+ +PTH A FD Sbjct: 26 LMLLDGHSLAYRAFFALPAENFKTATGQTTNAVYGFTSMLINLLRDEEPTHIAAAFDVSR 85 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 KTFR E++ YK+ R PD+ Q++ ++ A+G+P++A+ G EADD+I TLA +A+ Sbjct: 86 KTFRSEMYPAYKAQRSKSPDEFNGQVDLTKEVLDALGIPVMAIEGYEADDIIATLATQAD 145 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLAL 182 G VL+ TGD+D QLV ++T++ T P EV KYG+ P D+ AL Sbjct: 146 AEGYSVLVVTGDRDSLQLVNDSVTVLYPRKGVSELTRFTPAEVEKKYGLTPTQYPDYAAL 205 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 GD SDN+PG+PGVGEKTA ++ G L +L +++ G + A ++ N+ Sbjct: 206 RGDPSDNLPGIPGVGEKTASKWIREYGSLASLVDHVDEVKGKVGDALRANLASVQTNR-- 263 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 QL + D++L ++L + + + LF EF+ V + Sbjct: 264 -----QLTELVRDMQLPAGPDELAMVGWDRDRIHQLFDDLEFR-----VLRDRLF----- 308 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 ++++ PE + +D +L + ++AW+A+ + Sbjct: 309 --------STLSSATPEAES---GFDLDGAVLGQGEVRAWLAEHAGTGRSGLAVTAPHV- 356 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 + A+ GL+ A G +AY+ V +DA D+ + L L D K +K Sbjct: 357 VVGADPTGLAIAAADGTSAYVDVT--AVDADDE-------QALADWLADPAMGKALHEVK 407 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 + L + G L G+ DT L +YI+ ++D LA R+L+ + + ++ +G G+ Sbjct: 408 WGIHALRSRGWTLAGVTSDTSLAAYIVRPGQRTFNLDDLALRYLR-RELRADDGSGDGQL 466 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 L + + +A ++L + +L + L + +E+PL VL+ +E Sbjct: 467 SLLDDDGGAAKLAEQHMLEARAVVELAEVLDTELDRIDS-LPLLTEMELPLAFVLADLEA 525 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 G+ +D + R+ A+++ GE+ NL S KQLQT+LF+K + P K Sbjct: 526 AGIAVDVDHFGELEKNFAQRIRVAANAAYDVIGEQINLGSPKQLQTVLFDKLDM-PKTKK 584 Query: 603 PGGAPSTSEEVLEEL--ALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 +T + L+ L ++P +LE+R +LK T L + + GR+HT+++ Sbjct: 585 TKTGYTTDADALQALYEKTEHPFLAHLLEHRDATRLKVTVDGLLKSVAD--DGRIHTTFN 642 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA--------------------PEDY- 699 Q + ATGRLSST+PNLQNIPVR GR IRQ FI P+ Sbjct: 643 QTIAATGRLSSTEPNLQNIPVRTAAGREIRQGFIVGAGSGASGDGGVGAGSGASGPDGVG 702 Query: 700 -----------------VIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVF 742 +++ADYSQIE+RIMAHLS D GL+ AF G+D+H + F Sbjct: 703 AGSGSSGHDGGTGDGFDCLMTADYSQIEMRIMAHLSEDAGLIEAFNTGEDLHNFVGSRAF 762 Query: 743 GLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYM 802 G+P++ VT+E R KA+++GL YG+SAFGLA QL I R EA++ MD YF R+ GV +Y+ Sbjct: 763 GVPIDEVTTEMRHRVKAMSYGLAYGLSAFGLAAQLKISRDEAKEQMDAYFARFGGVRDYL 822 Query: 803 ERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIA 862 A+A+ Y TL GRR YLPD+ S N RR +AER A+NAP+QGTAADIIK AMI Sbjct: 823 HDVVAEARRNEYTATLFGRRRYLPDLNSDNWQRRQSAERMALNAPIQGTAADIIKVAMIN 882 Query: 863 VDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGE 922 V LQ+E+ R RM++QVHDELV EV + DAV + + M L VPL V VG G Sbjct: 883 VHKRLQSEELRSRMLLQVHDELVVEVATGERDAVEAVVREEMGAAITLSVPLEVSVGFGR 942 Query: 923 NWDQA 927 +WD A Sbjct: 943 SWDDA 947 >UniRef50_A9NF42 DNA polymerase I n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NF42_ACHLI Length = 880 Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust. Identities = 337/932 (36%), Positives = 503/932 (53%), Gaps = 75/932 (8%) Query: 9 LILVDGSSYLYRAYHA--FPP---LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + LVDG+S L+RAY+A +P L S G T A++ M+ +I + +H + FD Sbjct: 4 ITLVDGNSILFRAYNATAYPGAKVLQTSTGIYTNAVFAFSGMIDKII-EISNSHMLIAFD 62 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 T R + ++ YK+ R MP++L +QI +H ++K +G+ +++G EADD+IGTLA+ Sbjct: 63 TGEPTHRHKSYDDYKAGRKEMPEELGSQIPLIHELIKYLGIKEYSMAGYEADDIIGTLAK 122 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITL---------INTMTNTILGPEEVVNKYGVPPE 174 AEKAG V + + D D+ QLVT +IT+ + T T PE + YG E Sbjct: 123 MAEKAGYKVDVFSSDYDLLQLVTEHITVHMLKKGMRVVETYT-----PETLKETYGFSHE 177 Query: 175 LIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAA 234 L IDF AL+GD SDNIPGVPGVGE TA+ L+ G L+ + E I G + Sbjct: 178 LFIDFKALVGDKSDNIPGVPGVGEVTAKKLIAEYGTLENILNNAEHIKG-------KLGE 230 Query: 235 KLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAG 294 + NKE A S +L+TI TD+ L E +V + E L+ +K+ E K+ Sbjct: 231 NIRTNKEQAVFSKELSTILTDMPLPFDLEDTKVGEVDEESLINFYKRLELKQLV------ 284 Query: 295 KWLQAKGAKPAAKPQETSVADEAPEVTATV--ISYDNYVTILDEETLKAWIAKLEKAPVF 352 S + PEV AT S Y I E LK+ + + + A F Sbjct: 285 ----------------ISYNKKNPEVAATTAETSEFQYKAIDSENALKSLLNQ-DLAIYF 327 Query: 353 AFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDE 412 F + A L G+ + G Y + +L++ K LE Sbjct: 328 EFS----DFNYHKAELWGV--GLSNGKINYFVDSETFLNSAS----------FKAYLESS 371 Query: 413 KALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTIT 472 K K + K + L G E + +D +L +Y++ S G+ D +A+++ Sbjct: 372 KYKKYTYHYKGTKVFLKKLGTEFNHVTYDLLLAAYLIQSSIGKQDFTFIAQQFQITDIQY 431 Query: 473 FEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMP 532 EE+ GKG + I + G + A+ A + +L ++ D+ + L++ ++E+P Sbjct: 432 DEEVYGKGAKK-ALPLIPSDYEG-HIAKKAYIIHKL-MQQTLDVLTERNQLSLLNDVELP 488 Query: 533 LVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFE 592 L VL+ +E G+ +D K L N +++++LR+ +L + +AG +FN+ S KQL +LF+ Sbjct: 489 LSDVLADMEYQGLTVDLKELENQTKDMSLRIDKLRTEILLLAGVDFNVDSPKQLGDVLFD 548 Query: 593 KQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKT 652 G+ KKT G ST EVL L +P+ +I+EYR L KL STY + + + Sbjct: 549 TLGLPNGKKTKTGY-STGIEVLNNLIDHHPIINLIIEYRQLTKLYSTYLIGIKESV-FED 606 Query: 653 GRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELR 712 RVHT Y+QA+T TGRLSS +PNLQNIP+R EEGR+IR+ FI D V ADYSQIELR Sbjct: 607 NRVHTIYNQALTLTGRLSSLEPNLQNIPIRTEEGRQIRKLFIPEPDSYFVGADYSQIELR 666 Query: 713 IMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFG 772 ++A ++ K L AF E +DIH TA +VF ++TV SEQRR AKA+NFG+IYG+ + Sbjct: 667 VLAAMADVKNLKQAFEEDQDIHTVTAQKVF--HVDTVDSEQRRRAKAVNFGIIYGIGPWS 724 Query: 773 LARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSN 832 L+ + + KEA+ ++ Y E YP + +YM AK GYVETL RR Y+P++ S Sbjct: 725 LSEDIGVTVKEAENFISRYLEVYPEIKDYMTNIVEFAKTHGYVETLLNRRRYIPELSSKV 784 Query: 833 GARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDD 892 R +R ++NAP+QGTAADIIK AMI + +L+ + + ++I+QVHDEL+ EV K++ Sbjct: 785 FNLREFGKRTSLNAPIQGTAADIIKLAMIDLHNYLKDNKKKSKLILQVHDELIVEVVKEE 844 Query: 893 VDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 +D + + I +ME L V L G NW Sbjct: 845 LDEMKEVIPNIMEKAFNLGVRLKTSCDVGNNW 876 >UniRef50_C3WHF0 DNA polymerase I n=3 Tax=Fusobacterium RepID=C3WHF0_9FUSO Length = 916 Score = 505 bits (1300), Expect = e-141, Method: Compositional matrix adjust. Identities = 339/950 (35%), Positives = 523/950 (55%), Gaps = 71/950 (7%) Query: 10 ILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKTF 69 +L+D S+ +YRAY A + EPTGA+YG +N L S+I ++ P + A FD K + Sbjct: 5 VLLDVSAIMYRAYFANMNF-RTKNEPTGAVYGFINTLLSIIKEFNPDYMAAAFDVKRSSL 63 Query: 70 -RDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 R E+F YKS+R P+DL AQI + ++ A + + EADDV+G++A++ K Sbjct: 64 KRTEIFGDYKSNRQSTPEDLVAQIPRIEEVLDAFNINRYRIESYEADDVLGSIAKKIAKD 123 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNT-------ILGPEEVVNKYGVPPELIIDFLA 181 V+I TGDKD++QLV NIT+ T + E+VVN GV PE I D Sbjct: 124 DLEVIIVTGDKDLSQLVEKNITIALLGKGTEGEKFGMLRTAEDVVNYLGVVPEKIPDLFG 183 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 L+GD SD IPGV +GEK A A+ L+ +Y + + + G ++ L K+ Sbjct: 184 LIGDKSDGIPGVTKIGEKKALAIFSKYDSLEKIYENIDDLKNIEGIGP-SLIKNLTNEKD 242 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 +A+LS +LA I T++++ L E L+ E+L L K EFK + + + Q Sbjct: 243 IAFLSRELAKIFTNLDINLEEENLKYSMDK-EKLYELCKTLEFKMFIKKLNLEEKTQT-- 299 Query: 302 AKPAAKPQETSVADEAPEVTATV-------------ISYDNY-VTILDEETL----KAWI 343 + KP S+ D+ EV T I++ N + I+D ETL K ++ Sbjct: 300 SNFDHKPVLLSLFDKVEEVEKTEKVEKEIVYEKELNINFSNRELVIIDNETLLNEQKEYL 359 Query: 344 AKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALE 403 +K ++ +G+ + E Y P+ H L + + I + ++ Sbjct: 360 NNYKKIASIYYEE------------LGIILSTEEK-DLYFPLNHGGLLSKN-IDKNTLIK 405 Query: 404 LLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAE 463 + L D K + Y+ L N G + + D M+ +Y L S + D+ Sbjct: 406 FIAEL--DVKFIS------YNFKTLLNLGFTFKSMYMDMMI-AYHLISSQTKMDVFIPIT 456 Query: 464 RWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQK--HKG 521 + F+ GK I G +A + + L + L ++ ++ HK Sbjct: 457 EYSNVDAKDFKTTFGKA-------HIETLLVGEFAGYLSKIGLGI-LAIYDEINHILHKE 508 Query: 522 PL-NVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNL 580 L ++ EMPL+PVLS +ER G+KID N+S EL LA++EK +E AGEEFN+ Sbjct: 509 ELYDILIQNEMPLIPVLSLMERKGIKIDVSYFKNYSLELEKELAKIEKAIYEEAGEEFNI 568 Query: 581 SSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEEL-ALDYPLPKVILEYRGLAKLKST 639 +S KQL ILF K + KKT G ST VLE+L + Y + +++L+YR L KLK+T Sbjct: 569 NSPKQLGDILFVKMNLPSGKKTKTGY-STDVMVLEDLESYGYNIARLLLDYRKLNKLKTT 627 Query: 640 YTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY 699 Y D LP +++ + R+HTS++Q TATGRLSS++PNLQNIPV+ ++G +IR+ F+A E Sbjct: 628 YVDTLPNLVDSNS-RIHTSFNQIGTATGRLSSSEPNLQNIPVKTDDGIKIREGFVAGEGK 686 Query: 700 VIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLP-LETVTSEQRRSAK 758 V++S DYSQ+ELR++ +S+D+ L+ A+ E KD+H TA +F L + VT EQR AK Sbjct: 687 VLMSIDYSQVELRVLTSMSKDENLIEAYREEKDLHDLTARRIFNLSDSDDVTREQRTIAK 746 Query: 759 AINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETL 818 INF +IYG +AFGLA++L IP K+A +Y+ YFE+YP V + + +E GYV+TL Sbjct: 747 IINFSIIYGKTAFGLAKELKIPVKDASEYIKKYFEQYPRVTTFEKEVIEFGEEHGYVKTL 806 Query: 819 DGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIM 878 GR+ Y+ I S N +A AER A+N +QGTAA+++K+ M+ V L+ ++ + +++ Sbjct: 807 FGRKRYISGIDSKNKTIKAQAERMAVNTVIQGTAAEVLKKVMLKVYETLK-DKDDIALLL 865 Query: 879 QVHDELVFEVHKDDVDAVAKQIHQLMENCTRL-DVPLLVEVGSGENWDQA 927 QVHDEL+FEV + V+ ++ + +M+N +L DV L + + G+NW +A Sbjct: 866 QVHDELIFEVEESSVEKYSEILADIMKNTVKLEDVNLNININIGKNWAEA 915 >UniRef50_P46835 DNA polymerase I n=51 Tax=Actinobacteridae RepID=DPO1_MYCLE Length = 911 Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust. Identities = 343/945 (36%), Positives = 510/945 (53%), Gaps = 79/945 (8%) Query: 9 LILVDGSSYLYRAYHAFPP--LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L+L+DG+S +RA++A P G T A+YG ML +L+ + PTH A FD Sbjct: 18 LMLLDGNSLAFRAFYALPTENFKTRGGLTTNAVYGFTAMLINLLREEAPTHIAAAFDVSR 77 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 KTFR E + YK++R +P + QI+ ++ A+G+ + A +G EADD+I TLA +AE Sbjct: 78 KTFRSECYAGYKANRSSIPAEFHGQIDITKEVLGALGITVFAEAGFEADDLIATLATQAE 137 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLI----NTMTNTILGPEEVVNKYGVPPELIIDFLAL 182 G VL+ TGD+D QLV+ ++T++ T PE V+ KYGV P D AL Sbjct: 138 NEGYRVLVVTGDRDALQLVSNDVTVLYPRKGVSELTRFTPEAVIEKYGVTPAQYPDLAAL 197 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 GD SDN+PG+PGVGEKTA + G L L E + G +T A + +N+E Sbjct: 198 RGDPSDNLPGIPGVGEKTAAKWIVDYGSLQGLVDNVESVRGKVGEALRTHLASVVRNRE- 256 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 L + DV L T + L +Q + + LF EF+ V + +A A Sbjct: 257 ------LTELVKDVPLVQTSDTLRLQPWDRDRIHRLFDNLEFR-----VLRDRLFEALAA 305 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 + PEV +D +L+ T+ W+AK A D L Sbjct: 306 ----------AGERVPEVDE---GFDVRGGLLESGTVGRWLAK------HADDGRRSGLA 346 Query: 363 NISANL------VGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALK 416 + +L L+ A G YI A D D + A L P ++ KAL Sbjct: 347 IVGTHLPHGGDATALAVAAADGNGGYIDTAMLTPDDDDAL----AAWLADP--DNPKALH 400 Query: 417 VGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEI 476 + +D LA G L GI DT L +Y++ +D L+ R+L+ E+ Sbjct: 401 EAKLAMHD---LAGRGWTLGGITSDTALAAYLVRPGQRSFTLDDLSLRYLRR------EL 451 Query: 477 AGKGKNQLTFNQI-ALEEAGRYAAEDADVTLQLHLKMWPDLQKH-KGPLNVFEN------ 528 + Q F+ + ++E + A + TL L + DL L++ ++ Sbjct: 452 RAETPEQEQFSLLDNVDEVDKQAIQ----TLILRARAVVDLAAALDAELDLIDSTSLLGE 507 Query: 529 IEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQT 588 +E+P+ VL+ +E+ G+ D ++L + ++ + + A+ + G++ NLSS KQLQ Sbjct: 508 MELPVQQVLADMEKAGIAADLRLLTELQSQFGDQIRDAAEAAYAVIGKQINLSSPKQLQV 567 Query: 589 ILFEKQGIKPLKKTPGGAPSTSEEVLEELAL--DYPLPKVILEYRGLAKLKSTYTDKLPL 646 +LFE+ G+ K+T G +T + L+ L ++P + +L +R + +LK T D L L Sbjct: 568 VLFEELGMPKTKRTKTGY-TTDADALQSLFCKTEHPFLQHLLTHRDVTRLKVT-VDGL-L 624 Query: 647 MINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPED---YV-IV 702 GR+HT+++Q + TGRLSST+PNLQNIP+R GR+IR AF+ + Y ++ Sbjct: 625 NAVAADGRIHTTFNQTIATTGRLSSTEPNLQNIPIRTNAGRQIRDAFVVGSENNGYTELM 684 Query: 703 SADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINF 762 +ADYSQIE+RIMAHLSRD+GL+ AF G+D+H A+ FG+P+E +T E RR KA+++ Sbjct: 685 TADYSQIEMRIMAHLSRDEGLIEAFHTGEDLHSFVASRAFGIPIEDITPELRRRVKAMSY 744 Query: 763 GLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRR 822 GL YG+SA+GLA QL I +EA+ M+ YF R+ GV +Y+ QA++ GY T+ GRR Sbjct: 745 GLAYGLSAYGLATQLKISTEEAKLQMEQYFARFGGVRDYLMDVVEQARKDGYTSTVLGRR 804 Query: 823 LYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHD 882 YLP++ SSN R AAERAA+NAP+QG+AADIIK AMIAVD L+ + RM++QVHD Sbjct: 805 RYLPELDSSNRQIREAAERAALNAPIQGSAADIIKVAMIAVDKSLKQAKLASRMLLQVHD 864 Query: 883 ELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 EL+FEV + + + + + M + LDVPL V VG G +W A Sbjct: 865 ELLFEVAIGEREQIEAMVREQMGSAYPLDVPLEVSVGFGRSWGAA 909 >UniRef50_C4LIB4 DNA polymerase I n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LIB4_CORK4 Length = 925 Score = 502 bits (1292), Expect = e-140, Method: Compositional matrix adjust. Identities = 344/960 (35%), Positives = 521/960 (54%), Gaps = 77/960 (8%) Query: 2 VQIPQNPLILVDGSSYLYRAYHAFPP--LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAA 59 V+ + L+L+DG S +RA++A P T+S+G+ T A+YG ++ML +L+ Q KPTH+A Sbjct: 7 VEDTKKKLLLLDGHSLAFRAFYALPADKFTDSSGQHTNAVYGFISMLVTLLEQEKPTHSA 66 Query: 60 VVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIG 119 FD G TFR E F YK+ RP P + + QIE + ++ G+ + EADDVI Sbjct: 67 AAFDLAGPTFRSEKFADYKAQRPETPPEFKGQIELIRQALETFGITTVDYKRYEADDVIA 126 Query: 120 TLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI----LGPEEVVNKYGVPPEL 175 TLA + + G I TGD+D QLVT ++T++ T+ PE V KYGV P Sbjct: 127 TLATQGHEQGFDTYICTGDRDSLQLVTDDVTVLYTLRGVSNLARFTPEAVEEKYGVTPTQ 186 Query: 176 IIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAK 235 D AL GD+SDN+PGVPGVG KTAQ + G L L + I G + Sbjct: 187 YPDLAALRGDTSDNMPGVPGVGPKTAQKWINKYGSLSNLIDNIDDIGG-------KVGDA 239 Query: 236 LEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGK 295 L ++ + + +L + D+ ++ + E E++ A ++ F DV+ G Sbjct: 240 LRRDIDTVIQARELTEMVRDLPIKCSPEDCEIRPSARNDVNDFFD---------DVQFGM 290 Query: 296 WLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEK---APVF 352 L+ + +S A E +SY+ L + ++ W+ + A + Sbjct: 291 NLRERVFSVIPTQGGSSDAGNHRER----VSYER--VGLQKGKVRHWLEEATDHTPAGIA 344 Query: 353 AFDTETDSLDNISANLVGLSFAIEPGV-AAYIPVAHDYLDAPDQISRERALELLKPLLED 411 A ++ S N+ A AI G A I ++ D D LK L+D Sbjct: 345 ALGSKLPSSPNMKA------LAITQGKQTAIINMSRTTDDDRDA---------LKEWLQD 389 Query: 412 EKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWL----- 466 V + K +L++ G+ I DT L SY+++ G D++S+ R L Sbjct: 390 PDHPIVVHDGKGLLHMLSSEGLTATNIEHDTRLASYLIHPDFGSFDLESVVRRRLGRDLY 449 Query: 467 KHKTITFEEIAGKGKNQLTFN---------------QIALEEAGRYAAEDADVTLQLHLK 511 +++EE G+ Q++ + I+ E + A + A+ L+L + Sbjct: 450 DSDVVSWEEEHRSGR-QMSLDVGDLSSDGDDDRSVAGISWPEWAKLA-DHAEAPLELAEE 507 Query: 512 MWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLA-ELEKKA 570 + L K G +++EN+E+PLVP+L +ER G+K++ + + + +LA E+E+ Sbjct: 508 LAKKLDK-AGLYSIYENLEIPLVPILFGMERAGIKVNRERMTALRDSTAEKLAKEVEEAR 566 Query: 571 HEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKV--IL 628 + + NL S KQLQ +LF+K + KKT G ST+ + +E LA +P P + +L Sbjct: 567 ALVDMPKLNLGSPKQLQEVLFDKLELSKTKKTKTGY-STAAKAIERLAEKHPHPFLDHLL 625 Query: 629 EYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRR 688 +R K ST D L I GR+HT+++Q TATGRLSSTDPNLQNIPVR EEGR+ Sbjct: 626 AHREYQKRVSTL-DGLIKAI-ASDGRIHTTFNQTATATGRLSSTDPNLQNIPVRTEEGRQ 683 Query: 689 IRQAFIAPEDY-VIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLE 747 IR AF+ E Y +++ADYSQIE+R+MAH S+D+GL+ A+ G+D+H ++VF +P+ Sbjct: 684 IRAAFVPGEGYEALLTADYSQIEMRVMAHFSQDRGLIEAYRSGEDLHNFVGSQVFDVPVN 743 Query: 748 TVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRA 807 VT E RR KA+++GL+YG+S +GL++QL+I +EA+K M YFER+ GV Y+ Sbjct: 744 EVTPELRRRVKALSYGLVYGLSEYGLSQQLDISVREAKKIMVKYFERFGGVRRYLNEVVD 803 Query: 808 QAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWL 867 +A++ Y T+ GRR YL D+ S N R AERAA+NAP+QGTAADIIK AMI VDA L Sbjct: 804 RARKDEYTSTMLGRRRYLSDLASLNRQARENAERAALNAPIQGTAADIIKVAMIRVDAAL 863 Query: 868 QAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 + E+ R+++QVHDEL EV +++ V I + M+ L VPL V + G +W++A Sbjct: 864 KKEKLASRVLLQVHDELDVEVANGELEQVRGIIQREMDEAIELAVPLEVGMAVGADWNEA 923 >UniRef50_A9KNZ3 DNA polymerase I n=4 Tax=Firmicutes RepID=A9KNZ3_CLOPH Length = 994 Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust. Identities = 350/999 (35%), Positives = 537/999 (53%), Gaps = 106/999 (10%) Query: 9 LILVDGSSYLYRAYHA------------------FPPLTNSA-GEPTGAMYGVLNMLRSL 49 L+++DGSS L + FP + +A G T A+YG L +L + Sbjct: 21 LLVIDGSSLLSTQFFGNLPKEIMFAKTMEEKEKYFPKIMQTATGVYTNAVYGFLRVLLKI 80 Query: 50 IMQYKPTHAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAV 109 I KPT+ AV +D TFR E++ YK +R + L+ Q + ++K MG+ Sbjct: 81 IKDQKPTYLAVAWDISRNTFRREIYPDYKGNRGETLEPLKDQFKLCQHVLKEMGIVQFMD 140 Query: 110 SGVEADDVIGTLAREAEKAGRPVLISTGDKDMAQLVT--PNITLINTMTNT--------- 158 EADD GTL ++ E+ P+ + T D D QL+T N+ LI++ Sbjct: 141 ERYEADDFSGTLCQKFEEE-VPIRVMTKDNDYLQLITERTNLWLIHSTAKKTDELYEKYG 199 Query: 159 -------------ILGPEEVVNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALL 205 + PE V ++G+ P + + GDSSDNI GVPGVGE TA AL+ Sbjct: 200 LSKKELNVPDRTFLFTPELVEKEFGIEPSSVPSLKGIGGDSSDNIKGVPGVGEATAVALI 259 Query: 206 QGLGGLDTLYAEPEKIAGLSFRGAK-------TMAAKLE-------------QNKEVAYL 245 + ++ LY E + L G K T+ K ++ A L Sbjct: 260 KEYKTVENLY---EILNNLDETGKKEINEYWKTLGIKRTPINALLKISDTELVGEKAAIL 316 Query: 246 SYQLATIKTDVEL-ELTCEQLEVQQPAAEELLGLFKKYEFKRW---TADVEAGKWLQAKG 301 S LATIK D++L +L EQL + E F + EFK A+VE + Sbjct: 317 SKTLATIKKDIDLKDLGLEQLRIH-INTENAQKCFNELEFKTIKMDNAEVEDSSINNLRF 375 Query: 302 AKPAAKPQETSVADEAPEVTATVISY---------DNYVTILDEETLKAWIAKLEKAPVF 352 A K + TS +E + + +I + D+ K I +++K Sbjct: 376 E--ADKIKITSNLEEVETLFSNLIKLWEKNQKKLKKTKKSRNDKSDSKITIKEIKKPEYA 433 Query: 353 AFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDE 412 + D L + +LVG+S + G A + + PD ++ + L LLE + Sbjct: 434 SEDAVGIKLIMENKSLVGIS--VYYGSEASFIIPCEGFITPDFLTSK-----LNGLLEKK 486 Query: 413 KALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTIT 472 L + KY + AN FD + Y+L A ++ ++AE++L+ + Sbjct: 487 ITLAIFDIKKYLPYLNANE----ESPCFDVTIAGYLLEPDASTYEYQTIAEKYLELDLPS 542 Query: 473 FEEI-AGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQK---HKGPLNVFEN 528 +E+ +G+ T+ ++L + +Y + H ++P L K +G L +F Sbjct: 543 EKEVFSGQ-----TYASLSLLDQDQYKKAACYESYVAH-HIYPVLLKLLSERGLLPLFAG 596 Query: 529 IEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQT 588 IEMPLV L +E+ G+++D L ++S++L + + ELEK+ E+ G EFN++S KQL Sbjct: 597 IEMPLVYTLYDMEQRGIRVDTNGLKDYSDQLGVSIVELEKQIFELVGVEFNINSPKQLGE 656 Query: 589 ILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMI 648 ILF++ G+ KKT G STS EVLE+L+ ++P+ K+IL+YR L KLKSTY D L + Sbjct: 657 ILFQRLGLSYGKKTKTGY-STSAEVLEKLSSEHPVIKLILQYRQLTKLKSTYADGLVSYV 715 Query: 649 NPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQ 708 GR+H +++Q + ATGRLSST+PNLQNIP+R E GR+IR+ FI + Y+ + ADYSQ Sbjct: 716 EGD-GRIHGTFNQTIAATGRLSSTEPNLQNIPIRMELGRKIRKVFIPEDGYLFLDADYSQ 774 Query: 709 IELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGM 768 IELR++AH+S D L+ A+ + +DIHR TA+EVF P + VTS QR +AKA+NFG++YG+ Sbjct: 775 IELRLLAHMSNDARLIEAYRQAQDIHRLTASEVFHTPFDEVTSAQRSNAKAVNFGIVYGI 834 Query: 769 SAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDI 828 S+F L + L+I RKEA++Y++ YF YPGV Y++ + KE G V+TL GR +P++ Sbjct: 835 SSFSLGQDLDITRKEAEEYINKYFMTYPGVKTYLDGLIEEGKETGVVKTLYGRIRPVPNL 894 Query: 829 KSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEV 888 +SN +R+A ER A+N+P+QGTAADI+K AMI V+ L+ + + R+++Q+HDEL+ E Sbjct: 895 TNSNFMKRSAEERIAMNSPIQGTAADIMKLAMIHVNQVLKERKLKSRLLLQIHDELLVET 954 Query: 889 HKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 H+ +V+ VAK + + M+ L VPL VEV +G NW +A Sbjct: 955 HESEVEEVAKIMKEEMQQAASLSVPLEVEVANGNNWYEA 993 >UniRef50_UPI0001BC5C75 DNA polymerase I n=3 Tax=Fusobacterium RepID=UPI0001BC5C75 Length = 894 Score = 498 bits (1282), Expect = e-139, Method: Compositional matrix adjust. Identities = 340/929 (36%), Positives = 505/929 (54%), Gaps = 51/929 (5%) Query: 10 ILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKTF 69 +L+D S+ +YRAY+A + + PTGA+YG L L L+ +Y+ + A FD K Sbjct: 5 LLLDVSAMMYRAYYANMNM-RTKEMPTGAVYGFLLSLFQLLKEYESEYMAAAFDIKRSHL 63 Query: 70 -RDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 R EL+ YKS+R P+DL QI + A++ A G+ + + G EADD++G+L+ + K Sbjct: 64 KRTELYAEYKSNRDTTPEDLVKQIPYIEAILDAFGIQRIKIDGYEADDILGSLSTKLSKK 123 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSD 188 G PV I TGDKD++QL+ N + + E+V N V PE I D L+GDSSD Sbjct: 124 GIPVTIVTGDKDISQLLDENTEIYLLGKEVLKTREDVKNYIDVYPEKIPDLFGLIGDSSD 183 Query: 189 NIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQ 248 IPGV +G K A +L+ G L+ +Y +K++ L G KT+ ++++KE+A+LS Sbjct: 184 CIPGVRKIGPKKAVPMLEKYGNLEGIYENIDKLSELPGVG-KTLIQIMKEDKELAFLSRS 242 Query: 249 LATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAKP 308 LA I+ +++ + E+L+ ++ E L +F+K EFK + + + + K K + Sbjct: 243 LAKIERNLDFPFSLEELQFEKKE-EALREIFQKLEFKSFLKRLGSE---ETKEEKSLLQG 298 Query: 309 QETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANL 368 S + A + + T + N LEK + +F+ +++ S Sbjct: 299 NLFSASPRAEKESRTEVKEKN----------------LEKKIIKSFEELKKEMEDFSEED 342 Query: 369 VGLSFAIEPGVAA-------YIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 L G+ Y+P H+ L + LE K K G+ Sbjct: 343 KILLLYDRLGITCTFSQKNLYLPFFHEGL-----LGNNLDLEECKQFFSTLK----GKIY 393 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 Y L G +D M+ +Y L S + D + + +LK I +E K Sbjct: 394 TYHLKELYKLGFSFSKPVYDMMI-AYHLVSSQTKEDYTLIGQYYLKK--IAEDEKTVFAK 450 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 +L ++ E G + A V L L + + K K V E+PL+PVL+ +E Sbjct: 451 QKL--ESLSAEVYGDFLLNRAGV-LYSCLDILEEDVKEKELEAVLWETELPLIPVLADME 507 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 R G+KID K +S ELT +LA LEK E AGEEFNL+S KQL ILF K + KK Sbjct: 508 RIGIKIDRKYFEAYSLELTEKLALLEKAIWEEAGEEFNLNSPKQLGEILFLKLNLPTGKK 567 Query: 602 TPGGAPSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 T G ST EVLE L+ + + +LEYR LAKLK+TY D +P M + R+HT YH Sbjct: 568 TKTGF-STDVEVLEHLSSQGFQIASNLLEYRKLAKLKNTYVDPIPKMTG-EGDRIHTCYH 625 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRD 720 Q T TGRLSS+DPNLQNIPV+ EEG RIRQ FIA E + ++S DYSQ+ELR++A LS+D Sbjct: 626 QIGTVTGRLSSSDPNLQNIPVKTEEGIRIRQGFIAREGWKLLSIDYSQVELRVLASLSKD 685 Query: 721 KGLLTAFAEGKDIHRATAAEVFGLPL-ETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 + LL A+ E +D+H TA +F L E V+ EQR AK INF +IYG + FGLA++L I Sbjct: 686 ENLLKAYQEKQDLHSVTAKRIFELQEDEEVSREQRIMAKIINFSIIYGKTPFGLAKELGI 745 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 K+A +Y+ YF +YP V ++ + A+E GYVET GRR + I S N ++ A Sbjct: 746 SVKDAGEYIKRYFAQYPRVAQFERQVITFAEEHGYVETYFGRRRIIDGIHSKNKMVKSQA 805 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 ER A+N +QGTAA+I+K+ MI + +WL +++ + +++QVHDEL+FE+ + + + Sbjct: 806 ERMAVNTVVQGTAAEILKKVMIKIYSWL-SQKTDIHLLLQVHDELIFEIQEGKLQEYEEN 864 Query: 900 IHQLMENCTRL-DVPLLVEVGSGENWDQA 927 + + M +L +V L V G+ W +A Sbjct: 865 LIRFMRETIQLEEVELEVNTNIGDTWAEA 893 >UniRef50_A8R8A1 DNA polymerase I n=2 Tax=unclassified Erysipelotrichaceae RepID=A8R8A1_9FIRM Length = 861 Score = 497 bits (1280), Expect = e-139, Method: Compositional matrix adjust. Identities = 327/932 (35%), Positives = 518/932 (55%), Gaps = 94/932 (10%) Query: 9 LILVDGSSYLYRAYHAF---PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 L+L+DG+S L+RAY+A +T S G PT A+YG + M+ + P + V +DA Sbjct: 4 LLLIDGNSMLFRAYYATLYGRMMTTSNGIPTNAVYGFITMVNKALDMIDPDYVFVAWDAG 63 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 TFR ++ YK R + +L Q + + A G+ G+EADD+IG++A++ Sbjct: 64 KPTFRHTTYKEYKGTRKELDKELIVQFPIVREYLDAAGIKRYECEGIEADDIIGSIAKQH 123 Query: 126 EKAGRPVLISTGDKDMAQLVTP--NITLINTMTNTI--LGPEEVVNKYGVPPELIIDFLA 181 + +L S D+D+ QL+ P ++ L+ + I + +++ Y + P+ IID A Sbjct: 124 PELAIHILSS--DRDLLQLIDPTTDVYLMKKGISEIEVMDEAQLMETYTLCPQQIIDLKA 181 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGDS+DNIPGV G+GEKTA LL+ +D +Y +I G + KLE KE Sbjct: 182 LMGDSADNIPGVKGIGEKTAIKLLKEYQSVDNVYEHIAEIKG-------KLKEKLENGKE 234 Query: 242 VAYLSYQLATIKTDVELEL---TCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 A+LS LATIKTD ++ + TC+++E P+ L F KYE + Sbjct: 235 SAFLSKFLATIKTDAKIPVDMKTCKRVE---PSTT-LHDFFVKYEMNSF----------- 279 Query: 299 AKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTET 358 AK +AK +E V E N V + +E L ++ + ++A Sbjct: 280 ---AKASAKKEE--VKREGKR---------NVVPCVSKELL------VDGSVLYA---NL 316 Query: 359 DSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVG 418 D+ + A L G FAI G +Y+ D + LE + ++ K + Sbjct: 317 DAENYYDATLYG--FAIAHGNNC------EYISLEDAKNDTALLEYIHT--DNGKIVYDA 366 Query: 419 QNLKYDRGILANYGIELRGIAF-----DTMLESYILNSVAGRHDMDSLAERWLKHKTITF 473 +N+ + IAF D MLE+++L+ + D D LAE++ T++ Sbjct: 367 KNVYH--------AWHRNHIAFVPVHRDVMLEAFLLDGMIS--DYDKLAEKYAFDCTLSK 416 Query: 474 EEIAGK-GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMP 532 E++ GK GK +L + E+A YA + A+ + +++ +L++ K +++ IEMP Sbjct: 417 EDVFGKKGKPKL----VVEEDAAAYAMQCAENLANIEQQLFDELEQ-KDMKELYDTIEMP 471 Query: 533 LVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFE 592 +V VL +E+ GV + L +E ++ L + +E AG EFN++S KQL +L++ Sbjct: 472 VVEVLYAMEKEGVHTSVETLQEIAEATGKKIEALNAQIYEYAGMEFNINSPKQLAVVLYD 531 Query: 593 KQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKT 652 + G+ KK GA +VLE+L +P+ ++LE R K+ STY L I K Sbjct: 532 ELGLPCGKKRSTGA-----DVLEKLKPVHPIISLLLEQRKYQKIYSTYAVGLSKHI-LKD 585 Query: 653 GRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELR 712 G++HT ++Q T TGRLSS++PNLQNI VR+EEG+ IR+AF+A + ++SADYSQIELR Sbjct: 586 GKIHTIFNQIQTQTGRLSSSEPNLQNISVRDEEGKVIRKAFVASPQHTLMSADYSQIELR 645 Query: 713 IMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFG 772 ++AH++ +K ++ AF +G DIH TA ++F + + V S RRSAK +NFG++YG S FG Sbjct: 646 MLAHMANEKTMIQAFNQGIDIHNQTAMQIFDVDHDHVDSNMRRSAKTVNFGIVYGQSDFG 705 Query: 773 LARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSN 832 L+ QL I KEA++++D YF YP + +M+ T A +E GYV+T+ GRR Y+ +I N Sbjct: 706 LSEQLGITMKEAKRFIDKYFASYPNIKTFMDDTIAFCEENGYVKTMFGRRRYIKEINDKN 765 Query: 833 GARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDD 892 R +RAA+NAP+QG+AAD+IK AM+ + ++ ++ + RMI+Q+HDEL+F+V D+ Sbjct: 766 YMMREFGKRAAMNAPIQGSAADLIKLAMVHIYQTMKEKKVKSRMILQIHDELIFDVCDDE 825 Query: 893 VDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 +D + + Q M+ +L VPL+ E G+ W Sbjct: 826 LDTMKDIVEQGMQQAMQLRVPLIAEASFGKTW 857 >UniRef50_Q118S8 DNA polymerase I n=4 Tax=Cyanobacteria RepID=Q118S8_TRIEI Length = 1045 Score = 491 bits (1265), Expect = e-137, Method: Compositional matrix adjust. Identities = 350/1057 (33%), Positives = 527/1057 (49%), Gaps = 166/1057 (15%) Query: 10 ILVDGSSYLYRAYHAFPP-----LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 + VDG S +R+Y+AF L S G PT +G L L +I KP + A+ FD Sbjct: 9 LFVDGHSLAFRSYYAFAKSRNGGLKTSTGIPTSICFGFLKSLLEVINTQKPEYLAIAFDL 68 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 TFR E ++YK+ RP P+DL + L ++KA L ++ G EADD++GTLA++ Sbjct: 69 GKPTFRHEADKNYKADRPEPPEDLIIDLGNLQDLLKAFNLTVITAPGYEADDILGTLAKK 128 Query: 125 AEKAGRPVLISTGDKDMAQLVT--PNITLINT--MTNTI---LGPEEVVNKYGVPPELII 177 A G V I +GD+D+ QL+ I++++ +I PEEV K G+ P ++ Sbjct: 129 ASATGFKVKILSGDQDLFQLIDAEKGISVLHLPGGKGSIPQEFFPEEVKEKLGILPTQVV 188 Query: 178 DFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLE 237 D+ AL GD SDNIPGV G+G+KTA LL G L +YA E+I G + KL Sbjct: 189 DYKALCGDKSDNIPGVRGIGQKTAVKLLNEYGCLSEIYASLEQIKGAN-------KKKLV 241 Query: 238 QNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWT--------- 288 K A S +A I+ +V L + E + ++ E+ + +K E + + Sbjct: 242 LGKTEAEHSQFMAKIEVNVPLNIDIEDCKFKKIYPSEIEPILQKLELQHFINKIPHLEQQ 301 Query: 289 ----ADVEAG----------------------KWLQAKGAKPAAKPQETSVADEAPEVTA 322 +V++G W + AK Q ++ + P++ Sbjct: 302 FNSLVEVKSGLDESGIQQQEISQNTLVEIGSDDWFFSAEDTKVAKQQTSTKSKIKPQIVD 361 Query: 323 TVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGV--A 380 T+ + V IL E+ K PV A+DTET SL+ A LVG+ + Sbjct: 362 TIEKLNKLVNILKEQ-------KNPHIPV-AWDTETTSLEPRDAELVGIGCCWGKNMEDV 413 Query: 381 AYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAF 440 AYIP H D+++ LE LKP+LE + KV QN K+DR + GI+L G+ F Sbjct: 414 AYIPTGHKTDKNLDKVT---VLESLKPVLESSEYPKVFQNSKFDRLVFRCQGIKLTGVFF 470 Query: 441 DTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAE 500 DTML SY+LN A +H ++ + R+L++ I + T + + + Y Sbjct: 471 DTMLASYVLNPEA-KHSLEEIYIRYLRNVGINLQSYQDVVSKNQTIADLDILKVADYCGT 529 Query: 501 DADVTLQLHLKMWPDLQK-------HKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLH 553 VT QL K+ +L+K K + ++E PL PVL+ +E G++ID + L Sbjct: 530 QVWVTFQLVEKLRTELEKADKNKSTEKSLYRLLVDVEQPLEPVLAEMEFQGIRIDIEYLK 589 Query: 554 NHSEELTLRLAE-----------------LEKKAHEIAGEEF------------------ 578 S +L L E L+ + HEI F Sbjct: 590 KFSVQLKEDLEEIEKRAFKTVDSQVLQKYLQTEIHEIDFNSFSNQQELKKAISSPILKAY 649 Query: 579 ----------------------------NLSSTKQLQTILFE--KQGIKPLKKTPGGAPS 608 NL+S QL +LF Q K ++ G S Sbjct: 650 ITKLLKEHRQNLENIESQINQVETRDLLNLNSPSQLSELLFRILNQNHKKSRRIKTGY-S 708 Query: 609 TSEEVLEELALD---YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTA 665 T LE+L + +P+ IL +R L KL STY + +P ++ T RVHT+++Q T Sbjct: 709 TDVVALEKLQTEPEHHPIIDEILNHRTLYKLFSTYVEAIPRLVRSDTQRVHTNFNQTQTD 768 Query: 666 TGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLT 725 TGRLSS++PNLQNIP+ + R+IRQAF+ +D+++V+ADYSQIELRI+AHLS++ L+ Sbjct: 769 TGRLSSSEPNLQNIPIGTKFSRQIRQAFLPKKDWLLVAADYSQIELRILAHLSQEPVLIE 828 Query: 726 AFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQ 785 A+ +D+H TA +F E ++SE+RR K INFG+IYGM A LAR + I KE++ Sbjct: 829 AYKNNQDVHTVTAKLLF--EKEEISSEERRVGKTINFGVIYGMGAQKLARSVKITVKESK 886 Query: 786 KYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLY-------LPDIKSSN------ 832 ++++ Y ++Y V Y+E+ + QA +GYVET+ GRR Y + D+K Sbjct: 887 QFLEKYKQQYSLVFAYLEKLKKQAIAKGYVETILGRRRYFELESKTIRDLKDKEPEEINL 946 Query: 833 -----GARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFE 887 A R+A N+P+QG++ADIIK AMI ++ L Q ++++QVHDELVFE Sbjct: 947 QELKFSQNDAQILRSAANSPIQGSSADIIKIAMIRLNKILTNYQ--TKLLLQVHDELVFE 1004 Query: 888 VHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 V +++ + + I MEN L VPL+V++ G+NW Sbjct: 1005 VPPSELEKMQQLIKSTMENAVTLKVPLIVDIHGGKNW 1041 >UniRef50_Q252Y8 DNA polymerase I n=14 Tax=Chlamydiaceae RepID=Q252Y8_CHLFF Length = 869 Score = 491 bits (1264), Expect = e-137, Method: Compositional matrix adjust. Identities = 328/926 (35%), Positives = 500/926 (53%), Gaps = 67/926 (7%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA-KGK 67 + ++D S +++RAY A P + NS+G+ T A++G + + LI ++ P H VFD K Sbjct: 4 IFILDASGFVFRAYFALPDMKNSSGKGTQAVFGFIRSINKLIKEFSPNHMVAVFDGPNNK 63 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 R E++ YKS+R +DL QI + +GL L V GVEADDVI ++++ A Sbjct: 64 QSRREIYADYKSNREKKEEDLYQQIPVVKEYCNLLGLSHLEVEGVEADDVIASVSKLAIA 123 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTNTI-LGPEEVVNKYGVPPELIIDFLALMGDS 186 G V I T DKD+ QLV+PN+ +IN + + VVN YGVPP I D+LAL+GD+ Sbjct: 124 EGYEVCICTADKDLLQLVSPNVVVINPWKDQPPIDENGVVNIYGVPPCRIPDYLALVGDT 183 Query: 187 SDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLS 246 SDNIPGV G G K A ALLQ ++ + +++ G + + + K++ LS Sbjct: 184 SDNIPGVSGCGPKKAAALLQKYHSVEGILEHLDELTGSTHK-------MFSEQKDILLLS 236 Query: 247 YQLATIKTDVELELTCEQLE--VQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304 LA + +V L + LE + + EE+ + + FK VE Sbjct: 237 KDLAVLNNNVPLPTEIKDLEFPMHEIRQEEMNAFYMRQGFKTLVQQVE------------ 284 Query: 305 AAKPQETSVADEAPEVTATVIS-YDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDN 363 EA V VI+ +N + +L TL +K P F+ + L + Sbjct: 285 -----------EASNVYVEVINNSENLIEVL--PTLHG-----KKVP-FSVGYKGSFLPS 325 Query: 364 ISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKY 423 +S L+G++ A + V Y+D + + + ++ LK + G N+K Sbjct: 326 LS--LMGVALACDDSVY--------YVDVEN--ATDDVIKPLKDFFGRKDTEFYGYNIKR 373 Query: 424 DRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQ 483 D L N GI + IA D L +++N A LA+ L + GK Q Sbjct: 374 DSHALKNAGIHVNNIALDLALAEHLINGGAKISYQTLLADLGLVSSAGRY----GKEWGQ 429 Query: 484 LTFN-QIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 L+ Q + +Y E + + +L K K ++F N+EMPL VL IER Sbjct: 430 LSLPIQKSPPNPAQYFGEFVSHLPTIKETLLKEL-KSKNIEDIFFNMEMPLEKVLFTIER 488 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 NG+ +D + L N + L+ LA L + +AG FN+ S KQL +L+ K G+ P+ K Sbjct: 489 NGMPLDVEDLQNLEKILSEELAILADDIYALAGSPFNIKSPKQLAEVLYNKLGLTPVDK- 547 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 A ST EVLE + ++ + + IL +R + KL STY LP ++P T R+H +++Q Sbjct: 548 ---ARSTKAEVLEAMTGEHDVIEKILAFRSVEKLLSTYVRALPKQVDPCTFRIHPTFNQM 604 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFI-APEDYVIVSADYSQIELRIMAHLSRDK 721 T TGRL+ DPNLQNIP+R+E GR +R+AF ++ +SADYSQIELR +AHLS+D+ Sbjct: 605 GTVTGRLACQDPNLQNIPIRSERGRLLRKAFCDTHQNTYFLSADYSQIELRFLAHLSQDE 664 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 L AF +D+H TA++VF +PLE VT +QR AK +NFG+IYG A+GL++ L I Sbjct: 665 SLKLAFESREDVHTFTASQVFHVPLEKVTKQQRMQAKTVNFGIIYGQQAYGLSKILKISV 724 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 EAQK +D YF+RYP V ++ T +QA E V+TL GR + + + + RAA+ R Sbjct: 725 SEAQKLIDAYFDRYPDVARFINETVSQACENLRVKTLLGRERIIDNWTEFSNS-RAASGR 783 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 A+N +QG+AA++IK AM+ + L+ + R RM++Q+HDEL+FEV +++ + + + Sbjct: 784 LAVNTRIQGSAAELIKLAMLQLSDALEKRKLRSRMLLQIHDELIFEVPEEEKEEMQTLVR 843 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQA 927 +ME+ L VPL+V + G+NW + Sbjct: 844 DIMESAMILSVPLVVNILIGKNWAEC 869 >UniRef50_A6DML3 DNA-directed DNA polymerase, DNA polimerase I protein n=3 Tax=Bacteria RepID=A6DML3_9BACT Length = 1036 Score = 491 bits (1263), Expect = e-137, Method: Compositional matrix adjust. Identities = 265/646 (41%), Positives = 394/646 (60%), Gaps = 14/646 (2%) Query: 287 WTADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYD----NYVTILDEETLKAW 342 W D+E G A P + A A + + Y+ +Y + LKA Sbjct: 399 WLHDIELGLEQIASNHLPLIQEHLFLNAKFAELLATATVEYNSQRHDYNIVKSIPELKAV 458 Query: 343 IAKLEKAPV-FAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERA 401 + ++ KA + +FDTET LD SA +VGL AI A YIP D + +E Sbjct: 459 LDEITKAKLPVSFDTETTGLDVRSATIVGLGLAIRDHHAWYIPFNSD-------LDKEEI 511 Query: 402 LELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSL 461 L+ +KP D QN K+D +L GIE++ I FDT++ S+I N HD+DSL Sbjct: 512 LKEIKPFFADSSLKFFAQNAKFDLQMLHYAGIEVKNIDFDTLVASFICNPSRQFHDLDSL 571 Query: 462 AERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKG 521 + +L ++ I+ E + GKGK Q++ + +E Y ED D+TL+L ++ +L + + Sbjct: 572 SLHYLNYRKISTESLIGKGKKQISMADLPVERVATYCCEDVDITLRLRNELEAELHR-RD 630 Query: 522 PLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLS 581 N+F+ +++PL+PVLS++E NG+ I+ L S + + L + E++ H +AG EFN++ Sbjct: 631 LRNLFDEMDIPLIPVLSKMENNGISINLGTLEKISSDFSAELKKCEEQIHALAGHEFNIN 690 Query: 582 STKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYT 641 S KQ+ +LFE+ G+K KKT G STS EVLE LA + + + IL +R L+KL STY Sbjct: 691 SPKQVGVVLFEEMGLKAGKKTATGY-STSAEVLENLAAESEIVRAILRHRTLSKLISTYA 749 Query: 642 DKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVI 701 D LP ++ R+HT + Q ATGRL+ST PNLQNIP R EG+ IR AF APE + Sbjct: 750 DALPKEVSELDQRIHTRFSQTTAATGRLASTQPNLQNIPTRTAEGKSIRSAFQAPEGHHF 809 Query: 702 VSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAIN 761 +S DYSQIELRIMA LS+D GLL AF D+H TA+ VF L VT +QR +AKA+N Sbjct: 810 ISCDYSQIELRIMAELSQDPGLLEAFNNDFDVHTHTASLVFETELSEVTKQQRYAAKAVN 869 Query: 762 FGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGR 821 FG+++G +GLA+++ + EA++++ YF+RYP V ++M + A+++GY ET GR Sbjct: 870 FGIMFGQGPYGLAKEIGVSADEAKQFISNYFKRYPDVQKFMAKCVEDARDKGYSETSFGR 929 Query: 822 RLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVH 881 R YLP++ SSNG R+ AER ++N+P+QGTAADIIK AMI V L+ Q + +M++Q+H Sbjct: 930 RRYLPEMLSSNGRIRSGAERISVNSPIQGTAADIIKIAMIKVADELEKRQLKSKMLLQIH 989 Query: 882 DELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 DEL+FEV D+++ + + I Q+M + ++ VPL V+ + ++WDQ Sbjct: 990 DELLFEVPDDELEIMKELIPQIMTDIPQIKVPLKVDCAAAKSWDQC 1035 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 176/309 (56%), Gaps = 8/309 (2%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSA-GEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 Q+ + ++D +Y++RA++ +S G PT A++G +N ++I + P+H VFDA Sbjct: 4 QSSIFVIDSMAYIFRAFYGIRANMHSKDGLPTNALFGFINSFENIIRDFNPSHVVAVFDA 63 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 +TFR+E++ YK++R P++L+ Q + + + G+PLL G EADD+I T+A++ Sbjct: 64 GSETFRNEMYSEYKANRKECPEELKPQFDLVKEYIALRGIPLLIQKGFEADDIIATVAKQ 123 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTIL-GPEEVVNKYGVPPELIIDFLALM 183 A + +I +GDKD+ QLV + + +T N ++ E+VV GV P+ I+D+L++ Sbjct: 124 ATGSHIKTVICSGDKDLMQLVNDDTLICHTHKNNLMIDAEKVVEIMGVRPDQIVDYLSIC 183 Query: 184 GDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVA 243 GDS+DNIPG+PG+G K A LL L+T+ A +KI G K + + + ++A Sbjct: 184 GDSADNIPGLPGIGPKGAAKLLAEFDNLETILASHDKIKG------KKQSETIREKADLA 237 Query: 244 YLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAK 303 LS L ++ ++ L+ + E+L QP + L +++ F R+ D+ K +K Sbjct: 238 TLSKSLVILQDEMTLDKSYEELVPSQPDFDGLADFYERMGFARFLRDLPNIKASYEGNSK 297 Query: 304 PAAKPQETS 312 P K +S Sbjct: 298 PTLKQSLSS 306 >UniRef50_C7GZ50 DNA polymerase I n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZ50_9FIRM Length = 918 Score = 488 bits (1256), Expect = e-136, Method: Compositional matrix adjust. Identities = 333/951 (35%), Positives = 502/951 (52%), Gaps = 80/951 (8%) Query: 10 ILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKTF 69 I++DG+S +RAY+A ++ G T A+YG L+ML I + P + AV FD GKTF Sbjct: 7 IIIDGNSLFFRAYYAIKANMSADGMATNAIYGFLSMLYKSINDFSPDYIAVAFDLGGKTF 66 Query: 70 RDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKAG 129 R E F+ YK++R D+L QI + ++ AM + +L E DD+IG+ AR E Sbjct: 67 RHEKFDDYKANRRKTDDELLMQIPVIKEILAAMNIKILQKKAFEGDDIIGSFARFVESDD 126 Query: 130 RPVLISTGDKDMAQLVTPNITLINT---MTNT-ILGPEEVVNKYGVPPELIIDFLALMGD 185 V+I +GDKDM QL++ N + T ++N I ++ ++Y P+ ID+ A+MGD Sbjct: 127 VEVIIISGDKDMFQLISDNTKIAYTKRGISNIDIYDIQKFEDEYNFAPKHFIDYKAIMGD 186 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 SSDN GV G+G+K A+ L+ ++ +Y ++I+G KT A LE +K A++ Sbjct: 187 SSDNYKGVKGIGDKGARNLVTKYQTIENIYQNIDEISG------KTKLA-LENSKMQAFM 239 Query: 246 SYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPA 305 +LATI +++L LT + +++ P + L ++K Y+ + K L+ G Sbjct: 240 GKELATIIVNLDLGLTLDDVKLVDPDFDTLASIYKNYKLNTFL------KKLETNGCVNG 293 Query: 306 AKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNIS 365 ET DE + + +S D V L+ KA +A L +++ +D Sbjct: 294 TNDDET---DELKGMLSIDVSRD--VGSLEATLKKADVADL------CLINDSNHID--- 339 Query: 366 ANLVGLSFAIEPGV-AAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYD 424 +P + AAY V + D R L+++ +EK VG +LK Sbjct: 340 ----------KPEIYAAYFNVDGNIWLLDDMAQIHRVLDIV----AEEKVKVVGYDLKNA 385 Query: 425 RGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWL------------KHKTIT 472 L G+ L FD ML ++N+ D + E L + KT+T Sbjct: 386 LFALLQNGLPLFTPFFDVMLAYEVINNKGKYMDFYKILEDQLGIDVSDKLLKAKRKKTLT 445 Query: 473 FEEIAGKGKN-----QLTFNQI---------ALEEAGRYAAEDADVTLQLHLKMWPDLQK 518 ++I + N + T N + + +E R EDA + L + ++ K Sbjct: 446 ADDIKERYANICKSLKKTNNDVVNAALGDVESSDENARIGHEDALLYLLETVNIFKVYDK 505 Query: 519 HKGPL------NVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHE 572 K + VF IEMPLV V++ +E GV +D + L + EL+ AEL K +E Sbjct: 506 LKSQIEEDDLQKVFYEIEMPLVEVIASMENTGVWLDTEFLKTYEAELSNIEAELLDKIYE 565 Query: 573 IAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRG 632 +AG EFN++S KQL +LFEK ++P KT G ST+ EVL++L +P+ +ILE+R Sbjct: 566 LAGFEFNVNSPKQLGEVLFEKLNLEPKVKTKRGY-STNAEVLQKLRKTHPIIDLILEFRK 624 Query: 633 LAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQA 692 ++KL STY + G+V + Q +TGR++ +P LQ IPV+ + G+RIR+A Sbjct: 625 VSKLNSTYVRGF-MGFKGTDGKVRPEFLQIGASTGRMACINPALQTIPVKTDMGKRIRKA 683 Query: 693 FIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSE 752 F A +D V VSADYSQIELRI+ H+S D+GL+ AF G+DIH A A V G V+ Sbjct: 684 FKAGKDRVFVSADYSQIELRILGHVSCDEGLINAFKSGEDIHEAVAVNVLGAQKGAVSKA 743 Query: 753 QRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQ 812 R AKAINFG+IYGMS FGL+ +L I RK+A+KY+D YF ++ V EYME ++ AK+ Sbjct: 744 VRSKAKAINFGVIYGMSDFGLSNELEISRKDAKKYIDEYFAKHRAVYEYMEAQKSIAKQT 803 Query: 813 GYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQP 872 G V T GR +P+I + N R ER A+N+P+QG ADI+K AM V +Q + Sbjct: 804 GAVRTETGRIRKIPEINAQNIMVRNLGERLAMNSPIQGMGADIMKLAMNNVYRAIQKQGL 863 Query: 873 RVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGEN 923 ++++Q+HDELV + D + V K + ME L L+ SGEN Sbjct: 864 DAKIVLQIHDELVIDASVSDGEKVKKLLKDEMEAAYNLKTGLIANPQSGEN 914 >UniRef50_UPI0001976BF8 DNA polymerase I n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=UPI0001976BF8 Length = 943 Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust. Identities = 325/955 (34%), Positives = 486/955 (50%), Gaps = 65/955 (6%) Query: 6 QNPLILVDGSSYLYRAYHAFPP--LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + L++VDG S +RA+ A P + AG+ T A++G ML ++ KP H AV FD Sbjct: 13 RGTLLVVDGHSLAFRAFFALPAENFSTQAGQATNAVWGFATMLSQVLDSEKPDHLAVAFD 72 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 KG TFR+E+ YK R P+DL Q+ + M+ A+G+ + G E DD+I TLA Sbjct: 73 MKGGTFRNEMLPQYKGTREAAPEDLLTQLPLIQKMLTALGVTYVEKQGYEGDDIIATLAA 132 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDF 179 E++G L+ +GD+D QL+ +T++ + + P+ V +KY V P D Sbjct: 133 MGERSGYDTLVLSGDRDAFQLIDERVTVLYPGHHFKDLKHMTPQAVEDKYHVGPAQYPDL 192 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 AL G+++DNIPGVPGVG+ A + GGL+ + ++I G L +N Sbjct: 193 AALRGETADNIPGVPGVGDGFAAKWINQYGGLEGIIEHADEIGG-------KKGESLREN 245 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 E L+ ++ ++ DV+L + E L + A+ L LF EF T K L++ Sbjct: 246 IEQVKLNRKVNALRRDVDLGIGIEDLTFGEVDADALSELFTSLEFGPRTR----SKVLKS 301 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 A A AD+ E T+ + VTI DE L AWI D D Sbjct: 302 FNAGKRAGDAADKHADD--ENTSDDLRIPEAVTIADEAALAAWIDSARDGLGSPADNSDD 359 Query: 360 SLDNIS--ANLVGLSFAI---------EPGVAAYIPVAHDYLDAPDQISRERALELLKPL 408 N + A+++ + A+ PG + + + + + ++P Sbjct: 360 EPRNRAHCADVMASTCALYAEGSSKPGNPGCSVLML----EVGGKAAVLEAGVIAGVRPA 415 Query: 409 LE---DEKALK-VGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAER 464 L+ D A + V K ILA+ G++L FDT L Y++ ++ A Sbjct: 416 LQRFLDGHADRIVVHGYKEQSHILASLGLDLAEPWFDTKLAGYLVQPDYHADSLEQAASH 475 Query: 465 WLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQK------ 518 +L+ + +++A Q L+ +G D L LH+ M L Sbjct: 476 FLQLQLDNADDVA----------QGQLDLSGDVDPADQRKDL-LHMAMVRALADMLAAKI 524 Query: 519 -HKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEE 577 + + ++IE+P+ VL +E+ G +D L + + + ++ A + AG Sbjct: 525 DEREQFRLLQSIELPVSHVLFGMEQVGASVDFMRLTEMRDRFAIDARDAQETAWQFAGSR 584 Query: 578 FNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDY-------PLPKVILEY 630 NL S KQLQ +LF+ G+KP KKT G+ +T+ L++LA+ +L + Sbjct: 585 VNLQSPKQLQAVLFDDMGLKPTKKTKSGSYTTNASALQDLAVRSVGNERANGFLTALLRH 644 Query: 631 RGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIR 690 R KLK L +NP GR+HT++ Q V ATGRLSS DPNLQNIP RN EGR IR Sbjct: 645 RETNKLKQI-VQSLIDAVNPDDGRIHTTFEQTVAATGRLSSVDPNLQNIPNRNAEGREIR 703 Query: 691 QAFIAPEDY-VIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETV 749 AF+ E Y ++S+DYSQ+ELRIMA LS D L+ AF G D H+ A+ V+G+P++ + Sbjct: 704 SAFVPGEGYESLLSSDYSQVELRIMADLSGDDALIEAFRSGADFHKYVASLVYGIPVDDI 763 Query: 750 TSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQA 809 T +QR KA+++GL YG+S +GLA+QL I EA + YF + V EY+E A A Sbjct: 764 TPDQRTHVKAMSYGLAYGLSTYGLAQQLKISPGEADRLKSQYFATFGKVHEYLESLVAGA 823 Query: 810 KEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQA 869 +E+GY ET+ GRR Y P ++S N R AAER A+NAP+QG+AADI+K AMI L Sbjct: 824 REKGYTETMFGRRRYFPGLQSPNRNIRDAAERGALNAPIQGSAADIMKIAMIHASDALAK 883 Query: 870 EQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 + R R+I+Q+HDELV E+ + + V + ME+ L VPL V G G +W Sbjct: 884 AKVRSRIILQIHDELVVEIAPGEAEQVTGLVRDAMEHAVDLAVPLDVSTGIGSDW 938 >UniRef50_C8NZ98 DNA polymerase I n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZ98_ERYRH Length = 833 Score = 475 bits (1222), Expect = e-132, Method: Compositional matrix adjust. Identities = 325/934 (34%), Positives = 489/934 (52%), Gaps = 119/934 (12%) Query: 7 NPLILVDGSSYLYRAYHAFPP---LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 N L+L+DG+S L+RAY+ + +S+G T A+YG ML I PTH V FD Sbjct: 2 NKLLLIDGNSMLFRAYYGTLSRGYMKSSSGVVTNAVYGFSTMLAKAIEIINPTHVLVAFD 61 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 K KTFR ++F+ YK R + ++L +Q + + A + +SG EADD+IGT++R Sbjct: 62 TKDKTFRHDMFDEYKGTRKEVDEELVSQFALVREFLDAYPIKRFELSGYEADDIIGTMSR 121 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLI---NTMTNT-ILGPEEVVNKYGVPPELIIDF 179 +L T D+DM QL+ N+ ++ +T+ ++ ++++ G+ P+ I+D Sbjct: 122 MYPDFKVEIL--TSDRDMLQLIDDNVDVLLMKKGLTDLRLMDKTSLMDEMGIEPKQIVDM 179 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 ALMGD+SDNIPGVP +GEKTA LL + LY E+I G M K+ + Sbjct: 180 KALMGDTSDNIPGVPSIGEKTALKLLGQYTTFENLYVHKEEIKG-------KMGEKIREF 232 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 +E A +SY+LA I T V L++ + KYE Sbjct: 233 EEQARMSYKLAEIHTSVPLDIDLSSI---------------KYEI--------------- 262 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNY-VTILDEETLK------AWIAKLEKAPVF 352 P E+ A ++I+ DNY V ++++ET++ +W K + Sbjct: 263 --------PNESLNAFYRKYDMNSLIT-DNYDVEVVEKETIEFTNLDSSW-----KKSMI 308 Query: 353 AFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHD--YLDAPDQISRERALELLKPLLE 410 A E D NL G Y+ + YL + + E K L+ Sbjct: 309 AISMELDK----KGNLEG----------CYLSDGKENIYLTFGEMVGNEA----FKALIS 350 Query: 411 DEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKT 470 + ++ V + R L N IE+ D +L ++I+NS + ++A R Sbjct: 351 SDTSIVVDSSKSLYRFCLEN-NIEIANQFDDLLLLAFIVNS-----SITTMA-RLKDEFG 403 Query: 471 ITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIE 530 + F E G K F Q L + E + + L+V+E IE Sbjct: 404 LWFHEYEGMEKGA-AFTQAILSQFNTLKTEANKIEV----------------LSVYEEIE 446 Query: 531 MPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTIL 590 PLVP+LS+ E G+ +D VL + ++ L + +E+AG EFNL+S KQL +L Sbjct: 447 KPLVPILSKCEFRGINVDRSVLDEIALVTHQKIETLSNQVYELAGMEFNLNSPKQLAEVL 506 Query: 591 FEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINP 650 F+ + P KK A E ++EE A+ P ILEYR KL STY L I+ Sbjct: 507 FDHLKL-PTKKKRSTAVDVLEGLIEEHAIIAP----ILEYRKYQKLYSTYAVGLTKHIHA 561 Query: 651 KTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIE 710 G++HTS++Q T TGRLSS+DPNLQNI VR+EE R IR+AF+A E ++S DYSQIE Sbjct: 562 D-GKIHTSFNQHATQTGRLSSSDPNLQNISVRDEETRMIRKAFVASEGCTLMSIDYSQIE 620 Query: 711 LRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSA 770 LR++++L+ +K ++ AF G DIH TA +FG+ + VTS RR AK++NFG++YGMS Sbjct: 621 LRVLSYLADEKRMMEAFNGGHDIHSETAKAIFGV--DDVTSTMRRQAKSVNFGIVYGMSE 678 Query: 771 FGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKS 830 +GL++QL+I EA+ ++ Y E YP + +YM+ GYV+TL RR Y+P+I Sbjct: 679 YGLSKQLDITIPEARHFITRYNEIYPNITKYMDSVVEDCLRDGYVKTLFNRRRYIPEIYD 738 Query: 831 SNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHK 890 +N A + +RAA+NAP+QGTAADIIK AMI D L + + MI+QVHDELVF+V+ Sbjct: 739 ANRAVKDFGKRAAMNAPIQGTAADIIKIAMIKADELLTSNNYKSSMILQVHDELVFDVYD 798 Query: 891 DDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 D+++ + + +ME+ + L V V +G++W Sbjct: 799 DELEQIQDLMVSVMEHIVSWPIDLNVSVDTGKDW 832 >UniRef50_A0JWM3 DNA polymerase I n=7 Tax=Actinobacteria (class) RepID=A0JWM3_ARTS2 Length = 955 Score = 471 bits (1213), Expect = e-131, Method: Compositional matrix adjust. Identities = 322/942 (34%), Positives = 501/942 (53%), Gaps = 59/942 (6%) Query: 1 MVQIPQNPLILV-DGSSYLYRAYHAFPP--LTNSAGEPTGAMYGVLNMLRSLIMQYKPTH 57 ++ I P +LV DG S +RA+ A P + +AG+ T A++G +ML +LI + KPTH Sbjct: 59 VIPITDQPRLLVLDGHSMAFRAFFALPADKFSTAAGQHTNAIHGFTSMLINLIKEQKPTH 118 Query: 58 AAVVFDAKGKT-FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADD 116 AV FD +T R + YK R P ++ QI+ + ++ A G+ + + G EADD Sbjct: 119 VAVAFDVSDETTHRKAEYSEYKGGRNETPREMSGQIDLIDKVMGAWGIKTIKMPGYEADD 178 Query: 117 VIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI----LGPEEVVNKYGVP 172 V+ TLA EKAG VL+ TGD+D QL+T N+ ++ L + KY V Sbjct: 179 VLATLAAMGEKAGYEVLLVTGDRDAFQLITDNVFVLYPRKGVSDIPRLDAPAIQEKYFVS 238 Query: 173 PELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTM 232 P D AL+G+S+DN+PGVPGVG KTA + GGL+ + +KI G + Sbjct: 239 PAQYSDLAALVGESADNLPGVPGVGPKTAAKWINLYGGLEGVLEHLDKIGG-------KV 291 Query: 233 AAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVE 292 L +N + + +L + TD+EL +T + L +P L LF + EFK Sbjct: 292 GDSLRENVDAVKRNRRLNRLHTDLELPVTLDDLADPRPDQAALEQLFDELEFKTIRT--- 348 Query: 293 AGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAK-LEKAPV 351 + GA +E +A+ + +Y T L A++A + Sbjct: 349 --RLFALYGA------EEVDLAERES------LDIPDYSTPAGAAELSAFLAAGAGQRSA 394 Query: 352 FAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLED 411 A D + +A L + G A YI ++ +A + +L L D Sbjct: 395 VAVDLVPGRIGEDAAALA----IVRDGAAVYIDLSGQDAEAEN---------VLAAWLRD 441 Query: 412 EKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTI 471 +A KV K L+ G+EL G+ DT + Y++ +++ LA+ L + Sbjct: 442 PEAPKVMHGFKAALKALSARGLELEGVVDDTSISGYLIQPDRRTYELAELAQHHLNIEIS 501 Query: 472 TFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEM 531 T +A G+ +L+F+ AG A V L +L++ K + +E+ Sbjct: 502 T--AVAKAGQLELSFDGDDSAAAGELV-HAAAVVHALSRYFEAELKERKAE-ELLSTLEL 557 Query: 532 PLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILF 591 P+ VL+ +E G+ ID + + +L + ++ A G E NL S KQLQT+LF Sbjct: 558 PVSQVLADMELAGIAIDMQRMDEQLADLAKVIDNAQELAFAAIGHEVNLGSPKQLQTVLF 617 Query: 592 EKQGIKPLKKTPGGAPSTS---EEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMI 648 ++ + KK G + + + +LE+ ++ + ++ +R +KL+ + L + Sbjct: 618 DELQLPKTKKIKSGYTTDAASLKNLLEKTGHEFLVQ--LMAHRESSKLRQML-ESLKKSV 674 Query: 649 NPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY-VIVSADYS 707 + GR+HT+Y Q V ATGR+SS +PNLQNIP+R+EEGRR+R F+ E Y ++SADYS Sbjct: 675 -AEDGRIHTTYAQNVAATGRISSNNPNLQNIPIRSEEGRRVRGIFVVSEGYECLLSADYS 733 Query: 708 QIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYG 767 QIE+RIMAHLS D GL+ A+ +G+D+HR + +F +P + VTS R KA+++GL YG Sbjct: 734 QIEMRIMAHLSGDAGLIQAYRDGEDLHRFVGSNIFHVPTDQVTSAMRSKVKAMSYGLAYG 793 Query: 768 MSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPD 827 +++FGL++QL I EA+ M YF+R+ V +Y+ QA+ G+ T++GRR YLPD Sbjct: 794 LTSFGLSKQLEISVDEARTLMKEYFDRFGAVRDYLRGVVDQARIDGFTATIEGRRRYLPD 853 Query: 828 IKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFE 887 + S++ R AER A+N+P+QG+AADIIKRAM+ V A L+A+ + RM++QVHDELV E Sbjct: 854 LTSTDRQLRENAERIALNSPIQGSAADIIKRAMLGVHAELKAQGLKSRMLLQVHDELVLE 913 Query: 888 VHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW-DQAH 928 V + +AV K + + M + L VPL V++G G +W D H Sbjct: 914 VAAGEREAVEKLVTEQMGSAADLSVPLDVQIGVGPSWYDAGH 955 >UniRef50_C5CBM1 DNA polymerase I n=2 Tax=Micrococcus luteus NCTC 2665 RepID=C5CBM1_MICLC Length = 937 Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust. Identities = 337/971 (34%), Positives = 501/971 (51%), Gaps = 87/971 (8%) Query: 5 PQNP--LILVDGSSYLYRAYHAFPP--LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 P+ P L+++DG S +RA++A P G+ T A+YG ML ++I Q +PTH AV Sbjct: 7 PEAPQRLLVLDGHSMAFRAFYALPAENFATDTGQHTNAVYGFTAMLLTMIRQQRPTHVAV 66 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 FD G TFR E + YK+ R P + QIE +++A+G+P L + G EADD++ T Sbjct: 67 AFDLSGPTFRSEEYAEYKAGRSETPAEFAGQIELTVKVMEALGIPTLTLEGYEADDIVAT 126 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGP----EEVVNKYGVPPELI 176 L+ AE+AG ++ +GD+D QL++ T++ P + V+ KYGV P Sbjct: 127 LSARAEEAGWEAVVVSGDRDAFQLISERTTVLYPKKGVSDIPPMDADAVLAKYGVAPAQY 186 Query: 177 IDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKL 236 + AL+G+++DN+PGVPGVG A L+ G LD + A +I G + + Sbjct: 187 PELAALVGEAADNLPGVPGVGPGFAAKWLKQYGDLDGVLAHAHEITGKKGEALREHLEDV 246 Query: 237 EQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKW 296 +N+ +L + D++L + E + ++ P E + LF +F R V Sbjct: 247 RRNR-------RLNALVRDLDLPIGLEAMRLEMPEREPVEELFDALQFNRIRERV----- 294 Query: 297 LQAKGAKPA--AKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAF 354 + G + A P E A E E T E ++A++A E + Sbjct: 295 FEVFGERVGEDAPPPEVEAAPEFTEATTA-------------EDVRAFLAA-EAGTLLGV 340 Query: 355 --DTETDSLDNISANLVGLSFAIEPGVA-----AYIPVAHDYLDAPD----QISRE---- 399 D E +L V +F GVA A + V D DAPD RE Sbjct: 341 HVDVEGPALLPRRKVPVPGTFGTPVGVALVGEHAGLHVTLDG-DAPDPALVAAVREALGE 399 Query: 400 ----RALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGR 455 +A+ LK L+ A G L D L G+ D +L +Y++ Sbjct: 400 GGLAKAVHDLKRTLKALAAPTEGDGLGPDAA--------LDGVVDDVLLSAYLIQPDRRD 451 Query: 456 HDMDSLAERWLKHKTITFEEIAGKGKNQLTFN------QIALEEAGRYAAEDADVTLQLH 509 +++LAE L H + + + Q TF+ A A V +L Sbjct: 452 TSLEALAEAHL-HTPLAAPREPAQQRAQGTFDLDGGQAAADRAARAADAVRAAWVVRRLS 510 Query: 510 LKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKK 569 + P + +G + + +E+PL +L+R+E G+ +D L + E+ T ++ Sbjct: 511 TQFTPQVLD-RGAQRLLQELEIPLSRLLARMELAGIAVDVDALTDLREDFTAAADAAKES 569 Query: 570 A-----HEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEEL--ALDYP 622 A E G + NL S KQLQ +LFE+ + +KT G ST + L++L +P Sbjct: 570 AWASVAEETGGMQVNLGSPKQLQEVLFERLNMPRTRKTKTGY-STDVDSLQDLLEQTRHP 628 Query: 623 LPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVR 682 + ++ +R KL+ T + L + P R+HT+Y Q ATGRLSS PNLQNIPVR Sbjct: 629 FLENLMAHRDATKLRQT-VEGLLETVAPDD-RIHTTYSQTAAATGRLSSLHPNLQNIPVR 686 Query: 683 NEEGRRIRQAFIAPE----DYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATA 738 E GRRIR+ F+A E V++SADYSQIE+RIMAHLS D+GL+ AF EG+D+H Sbjct: 687 TEAGRRIREVFVADEVAGEQAVLLSADYSQIEMRIMAHLSEDEGLIQAFREGEDLHSFVG 746 Query: 739 AEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGV 798 ++VFG+ + VT+EQR KA+++GL YG+S+FGL++QL I EA+ M YF+R+ GV Sbjct: 747 SQVFGVDPDEVTAEQRAKVKAMSYGLAYGLSSFGLSKQLKISVDEARGLMKGYFDRFGGV 806 Query: 799 LEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKR 858 +Y+ AQA++ GY T++GRR YLPD+ S N R AERAA+NAP+QG+AADIIKR Sbjct: 807 RDYLRDVVAQARQDGYTSTIEGRRRYLPDLSSDNRQLRDMAERAALNAPIQGSAADIIKR 866 Query: 859 AMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEV 918 AM+ V A L+ R+++QVHDEL+ EV +++ + + M L VPL V V Sbjct: 867 AMLDVQAGLEEHGLASRLLLQVHDELILEVPAAELEQATALLEERMGRAAELSVPLDVHV 926 Query: 919 GSGENW-DQAH 928 G G +W D AH Sbjct: 927 GRGRSWHDAAH 937 >UniRef50_C2BWF0 DNA-directed DNA polymerase n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BWF0_9ACTO Length = 932 Score = 469 bits (1206), Expect = e-130, Method: Compositional matrix adjust. Identities = 324/949 (34%), Positives = 502/949 (52%), Gaps = 54/949 (5%) Query: 9 LILVDGSSYLYRAYHAFPP--LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L+++DG S +RA+ + P S G T A++G +ML ++I KPTH FD Sbjct: 6 LLVLDGHSLAFRAFFSRDPEHFRTSTGVYTNAVHGFFSMLLTMIRAEKPTHIGAAFDLSR 65 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 +FR +++ YK R P + Q+E + M+ AMG+ L VEADD++ TLA + Sbjct: 66 HSFRTDIYPDYKGGRAETPPEFIGQVENIQKMLSAMGIKWLTEPNVEADDILATLATKGT 125 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLI---NTMTNTI-LGPEEVVNKYGVPPELIIDFLAL 182 K+G VL+S+GD+D QL++ ++T++ +++ T + P+ V ++Y V P+ + AL Sbjct: 126 KSGMEVLVSSGDRDSFQLISDDVTVLYPGRSISETKRMTPQAVKDRYDVWPQQYPEIAAL 185 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 +G+ +DN+PGVP VGEK A + + G LD+L +++ G RG L Q+ + Sbjct: 186 VGEHADNLPGVPLVGEKVAASWINEYGSLDSLLEHRDELKGK--RGEN-----LRQHIDD 238 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRW-TADVEAGKWLQAKG 301 + QL ++TD++L L+ E L + + + + EFK+ T + G+ Sbjct: 239 VLRNRQLNRLRTDLQLPLSLEDLHWTGFDPQAIQEICDELEFKQMRTQILRLGQAFGVTS 298 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 + E PE D Y + + + + F +D L Sbjct: 299 INGDSATMELDRTQTEPEPQDA----DGYGVVPEPQ-------RFRLGSDFTATQFSDWL 347 Query: 362 DNISANLVGLSFAIEPGVAA------YIPVAHDY-----LDAPDQISRERALELLKPLLE 410 N ++ +G+ GV ++ D L PD+++ + L L Sbjct: 348 QNTQSSSLGIWAVGNIGVTNPRIDWLFLAAERDCQGQCVLIVPDELTPQTEHLLCDALAG 407 Query: 411 DEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKT 470 D K K + K R L +G EL G D + Y++N R + +R L + Sbjct: 408 DRK--KTVYDAKSLRHALHAHGWELHGAVTDIKMLDYLVNPDGNRTKFAGVTKRLLGWEI 465 Query: 471 ITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLH-------LKMWPDLQK--HKG 521 K Q+T + + +E G +A+ TL L+M P L++ H Sbjct: 466 DEKPSDISKISEQMTLD-LGVELDGNSSAQPWPQTLINQAIYAYALLQMQPTLEQLAHFR 524 Query: 522 PLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLS 581 ++ +E PL +L ++E G+ ID L +++ L +A ++ A + G E NLS Sbjct: 525 QVDGLLELENPLSYILEKMEYTGIGIDTIYLDEYAQSLQSEVAMAQQSAFDSIGREVNLS 584 Query: 582 STKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLP--KVILEYRGLAKLKST 639 S KQLQ +LF + + P K +T + LEELA P P + +L +R KL Sbjct: 585 SPKQLQEVLFTQLEL-PKTKKTKTGYTTDAKALEELARYNPHPFLEALLYHRDRIKLLQI 643 Query: 640 YTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY 699 + + + GR+HT++ Q V ATGRLSS DPNLQNIP R +G++IR+AF+ + Y Sbjct: 644 VRNLRERVAD--DGRIHTTFGQTVAATGRLSSIDPNLQNIPARTVDGQKIREAFVPQKPY 701 Query: 700 V-IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAK 758 +++ADYSQIE+RIMAHLS D+GLL AFA G+D+HR+ AA V+G+ + VT QR K Sbjct: 702 AALMTADYSQIEMRIMAHLSGDEGLLAAFASGEDLHRSVAALVYGVQPDEVTPTQRSHVK 761 Query: 759 AINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETL 818 A ++GL YG+SA+GLA QLNI +++A++ MD YFER+ V EY+ + A A GY ET+ Sbjct: 762 ATSYGLAYGLSAYGLAAQLNISQRDAKQLMDTYFERFGKVREYLNQIVATATRVGYTETM 821 Query: 819 DGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIM 878 GRR YLP+++S+N A RAA+NAP+QG+AAD++K AM+ VDA L+ EQ + R+++ Sbjct: 822 RGRRRYLPELRSTNRNVADNARRAALNAPIQGSAADLMKAAMLQVDADLRQEQLQSRVLL 881 Query: 879 QVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 QVHDELV EV + + + + Q M +L VPL V VG G NW A Sbjct: 882 QVHDELVLEVAPGETERLETLVRQAMTGVAKLRVPLEVSVGIGPNWRAA 930 >UniRef50_C7H3Z2 DNA polymerase I n=2 Tax=Ruminococcaceae RepID=C7H3Z2_9FIRM Length = 859 Score = 465 bits (1197), Expect = e-129, Method: Compositional matrix adjust. Identities = 327/935 (34%), Positives = 487/935 (52%), Gaps = 100/935 (10%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 L+++DG+S RA++ LT G T A++G LN++ SL+ + +P AV FD K T Sbjct: 10 LLVIDGNSIANRAFYGIKLLTTKDGRYTNAIFGFLNIMNSLLRECEPDEVAVAFDLKHPT 69 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR E+++ YK R MPD+L Q+ L ++ +G ++ G EADD++GTLA E Sbjct: 70 FRHEMYDGYKGTRHAMPDELAQQMPILKELLTDLGYRQVSAKGWEADDILGTLAAACEAR 129 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVN------KYGVPPELIIDFLAL 182 ++TGD+D QLV+ T++ + E ++ KYG+ P+ +I+ +L Sbjct: 130 RDDCFLATGDRDSLQLVSETTTVLLATSAMGRSKTETMDLDAIHEKYGIEPKQLIEVKSL 189 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 MGD+SDNIPGV G+GEKTA L++ G LD++Y + + R + + A +E Sbjct: 190 MGDTSDNIPGVKGIGEKTAMTLVKNFGTLDSVYDHLDSPI-IKPRQRENLLA----CRED 244 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 AYLS+ L TI+TD + D G + +G Sbjct: 245 AYLSHTLGTIRTDAPI-------------------------------DTAEGAYKVTEGN 273 Query: 303 KPAAKP--QETSVADEAPEVTATVISYDNYVTILDEETL---KAWIAKLEKAPVFAFDTE 357 KPAA QE + + T D V LD +TL A IA L P + Sbjct: 274 KPAAVRLMQELEI-----QTLITRFGLDGIVPELDPDTLPEVDAAIASLPAEPSGHY--- 325 Query: 358 TDSLDNISANLVGLSFAIEPGVAAYI-PVAHDYLDAPDQISRERALELLKPLLEDEK-AL 415 LV A+ +A + P A + D + E L LL+D K L Sbjct: 326 ----------LVAARPAVLGKKSAVVQPEA--WYAVQDTTVYPLSEEELVSLLDDPKVTL 373 Query: 416 KVGQNLK-YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFE 474 V + Y R + A G I +D L +Y+L++ A + + +LA + + E Sbjct: 374 DVFDSAPLYARAMAA--GSWGSSIVWDGKLAAYLLDASASHYLLTTLATSYHARSAFSCE 431 Query: 475 EIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLV 534 E DA L KM ++ ++ G +++ NIE PL Sbjct: 432 EYP-----------------------DAGFLADLFAKMKAEITEN-GEDDLYNNIEFPLA 467 Query: 535 PVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAG-EEFNLSSTKQLQTILFEK 593 VL+ + R G+ +D + + +L L ++ + AG +FN +S KQL T+LF+ Sbjct: 468 QVLADMTRTGILVDREGIEAFGVQLRQELDQVLTRIEMEAGTSDFNPNSPKQLGTLLFDT 527 Query: 594 QGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTG 653 G+ KKT G ST E LE+L D PL + IL+YR KL STY + L L + + G Sbjct: 528 MGLPHGKKTKNGW-STDAETLEKLR-DIPLVEDILQYRACQKLNSTYVEGL-LKVIGEDG 584 Query: 654 RVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRI 713 R+HT ++Q TGRLSS +PNLQNIP+R E G ++R F+A V+V ADYSQIELRI Sbjct: 585 RIHTRFNQTEARTGRLSSDNPNLQNIPIRTEMGSKLRAYFVAKPGCVLVDADYSQIELRI 644 Query: 714 MAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGL 773 +AH++ D + AF G DIHR+TAA+++ + E VT R SAKAINFG++YG A+ L Sbjct: 645 LAHVTGDAHMQEAFLSGADIHRSTAAKIYNIRPEDVTPRLRSSAKAINFGIMYGKGAYSL 704 Query: 774 ARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNG 833 ++ + + KEA+ ++ Y +P + YME+T A A++ GYV TL GRR LP++ S+N Sbjct: 705 SKDIGVSVKEAEAFLQTYLATFPNIDGYMEKTIADARQCGYVSTLFGRRRALPELNSNNH 764 Query: 834 ARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDV 893 RA+ ER A N P+QGTAAD+IK AM+ V L+ E+ R+I+ VHDEL+ E + + Sbjct: 765 NIRASGERMARNTPIQGTAADVIKLAMVRVWRRLRNEKMESRLILTVHDELIVEAPEAEA 824 Query: 894 DAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 + A+ + + ME C VPL +V +G+NW +AH Sbjct: 825 EKAAQILREEMEGCVHYAVPLSTDVHTGKNWLEAH 859 >UniRef50_B2GGW1 DNA polymerase I n=1 Tax=Kocuria rhizophila DC2201 RepID=B2GGW1_KOCRD Length = 960 Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust. Identities = 322/960 (33%), Positives = 492/960 (51%), Gaps = 71/960 (7%) Query: 2 VQIPQNPLILVDGSSYLYRAYHAF---------PPLTNSAGEPTGAMYGVLNMLRSLIMQ 52 V P+ L+L+DG S +RA+ A P S G T +YG +N + L+ + Sbjct: 36 VSRPEKRLLLIDGHSLAFRAFFALSRAAEYGNGPGFVTSEGVHTEGVYGFVNTMVKLVRE 95 Query: 53 YKPTHAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGV 112 KPTH V FD +G T R + + YK R P++ Q+ + +++A+G+P++ + G Sbjct: 96 EKPTHLVVSFDLEGPTLRSQEYGEYKGGRDETPEEFHGQVPNIQRVLEALGVPIVTMEGH 155 Query: 113 EADDVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLI---NTMTN-TILGPEEVVNK 168 EADDV+ TLA A VL+ +GD+D Q++T ++T++ T ++ + V K Sbjct: 156 EADDVLATLASRAAAEDFEVLVFSGDRDAFQMITDHVTVVYPGRTPSDLRRMDAAAVYEK 215 Query: 169 YGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRG 228 Y V P+ D AL G+++DN+PGVPGVG A + G +D+L +I G Sbjct: 216 YKVAPQNYPDLAALTGETADNLPGVPGVGPGFAAKWITAYGPVDSLLEHAGQITG----- 270 Query: 229 AKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWT 288 L +N+E+ + +L + TD+ LE+ + + AE + +F + EF Sbjct: 271 --KKGEALRENEELVRRNRKLNRLVTDLPLEIDLSATALPKAHAERVAEVFDELEFGSQL 328 Query: 289 ADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWI-AKLE 347 G+ L+A A+ + VA AP T + W+ A+ + Sbjct: 329 R----GRLLEAFAAQTSGD----DVAALAPVTDVTRVHT--------APEFADWLEAQDQ 372 Query: 348 KAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKP 407 APV D + L G A D + A +++R ++ Sbjct: 373 DAPVVVRRLSADPKAPSGEEVTALVLTGTTGAAL------DLVAADQELTRA-----VEQ 421 Query: 408 LLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLK 467 L D A KV LK L GI L G+ D L Y++ ++++S + L+ Sbjct: 422 WLGDTTAAKVVDGLKDLYHGLIQRGIVLAGVVDDVQLSGYLVRPALRSYELESQLAQHLE 481 Query: 468 HKTITFEEIAGKGKNQLTFNQIALE-EAGRYAAEDADVTLQLHL-KMWPDLQKH------ 519 + EE G G + +ALE E DA + + L + +L +H Sbjct: 482 VEVPAAEESTG-GADAHGQTALALEDEDALGGVSDAVLVREATLGRACRELSEHLRALLE 540 Query: 520 -KGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEF 578 G L + +EMPL +L+R+E G+ +D + E+L + + ++A E Sbjct: 541 ADGQLGLLTELEMPLAVILARMEATGIAMDRPGIDVLFEDLQHPIDQAFEQAQAQIDHEV 600 Query: 579 NLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYP------LPKVILEYRG 632 NL STKQLQ ++F++ G+ KKT G + + V + + P ++ +R Sbjct: 601 NLGSTKQLQAVMFDELGLPKTKKTKTGYTTDASAVADLIGKVSPDTAGSRFLVALMNWRE 660 Query: 633 LAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQA 692 +KLK + + GR+HT+Y Q V ATGRLSST PNLQNIPVR E+G+RIR Sbjct: 661 YSKLKQIVAGLRDAI--AEDGRIHTTYQQTVAATGRLSSTGPNLQNIPVRTEQGQRIRDV 718 Query: 693 FIAPEDY-----VIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLE 747 F+ ED +++ADYSQIE+RIMAHLS D+GL+ AF G+D+HR + VF + E Sbjct: 719 FVVGEDTQGPFECLMTADYSQIEMRIMAHLSGDEGLIEAFRGGEDLHRFVGSRVFDVAPE 778 Query: 748 TVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRA 807 VT + R KA+++GL+YG+S++GL++QL+I EA+ M YFER+ GV +++ Sbjct: 779 DVTPQMRSKVKAMSYGLVYGLSSYGLSQQLHIGVDEARTMMSGYFERFGGVRDFLRGVVE 838 Query: 808 QAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWL 867 +A+ +GY ET+DGRR YLPD+ S N R AAER A+NAP+QG+AADIIK+AMI VD L Sbjct: 839 EARSKGYTETIDGRRRYLPDLTSDNRQARQAAERMALNAPIQGSAADIIKKAMIGVDRAL 898 Query: 868 QAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 + Q R R+++QVHDEL+ EV + + V + + M L VPL V VG+G W QA Sbjct: 899 RDGQLRSRVLLQVHDELIVEVAPGEREEVERILRTEMAGAAELTVPLDVNVGTGRTWHQA 958 >UniRef50_D2NTK8 DNA polymerase I n=2 Tax=Rothia mucilaginosa RepID=D2NTK8_9MICC Length = 1003 Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust. Identities = 347/1014 (34%), Positives = 504/1014 (49%), Gaps = 115/1014 (11%) Query: 9 LILVDGSSYLYRAYHAFPPL---------TNSAGEPTGAMYGVLNMLRSLIMQYKPTHAA 59 L+L+DG S R++ + S G+ T A++ L+ L S+I +P+H A Sbjct: 8 LLLIDGHSLALRSFFGIYTMAEKTGQHIFVRSDGQHTEAVHAFLSTLLSIIKDNQPSHIA 67 Query: 60 VVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIG 119 V FD G TFR + YK R +P+ QI+ + M+ A+ +P L EADD++ Sbjct: 68 VAFDLPGGTFRTAEYGEYKGGRNAIPEAFNGQIDLIKKMLGALNIPALTYENYEADDIVA 127 Query: 120 TLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN------TILGPEEVVNKYGVPP 173 TL R +AG VLI +GD+D+ QLVT ++TL+ +T + P V K VPP Sbjct: 128 TLTRRGTEAGYKVLILSGDRDIFQLVTDDVTLLYPVTTGPSKGIQRMDPAAVEKKTKVPP 187 Query: 174 ELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMA 233 + D AL G+ +DN+PGVPGVG A L G L + +KI G Sbjct: 188 HMYPDLAALTGEQADNLPGVPGVGPGFAAKWLGEYGSLQGVLDNRDKIGG-------KKG 240 Query: 234 AKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFK--RWTADV 291 L +N + + +L + D++L +T E P + L F + EF+ R A Sbjct: 241 EALRENVDNVVRNRRLNQLVNDLDLNVTLEDTAF-TPDLDALNTFFDEVEFRTIRKRAAD 299 Query: 292 EAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPV 351 G ++A G+ A + + AP+ T Y T + K A Sbjct: 300 TLGPIVRAAGSAGATSSAAEAGEEGAPKKAPTGPVYAPINT--------SAPTKNADAAA 351 Query: 352 FAFDTETDSLDNISANLVGLSFAI----EPGVAAY----IPVAHDYL-DAPD-QISR--- 398 F + +N + G A+ E V Y +PVA + DAP ++++ Sbjct: 352 FRAFCSAAAEENYGTDEQGAPIAVPERLEGAVTLYPVTNLPVARPAIGDAPAVKVTKTKI 411 Query: 399 ---ERALELLKPLL--------------------------EDEKALKVGQNLKYDRGILA 429 E ELL LL DE A K+ +LK R +L Sbjct: 412 RAAEENPELLGVLLTSKSTSLWIDTRTIDPELDAALAAWLSDEAARKIVMDLKVQRKLLR 471 Query: 430 NYGIELRGIAFDTMLESYILNSV--AGR----HDMDSLAERWL-----KHKTITFEEIAG 478 YG EL G D L SY+ + A R M+ LAER+L + + F+ Sbjct: 472 AYGYELAGAVEDPALSSYMCGFIPTATRKLFSERMEDLAERYLWIPKEPYAQLVFQPEED 531 Query: 479 KGKNQLTFNQIALEEAG---RYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVP 535 + + L F+ E RY + + + +L + ++++H G L V+E IE+PL+ Sbjct: 532 EAEPSL-FSLPGEAEPVDNLRYFTQISRIIHELARLLHYEMEEH-GQLKVYEEIELPLLY 589 Query: 536 VLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAG---------EEFNLSSTKQL 586 VL+ +E+ G+ + +L + + R + ++ A I G E NL+S KQL Sbjct: 590 VLADMEQAGIAVSDALLTELHDTFSARANQAQESARAIIGGEVATEDGEEPLNLASVKQL 649 Query: 587 QTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYP------LPKVILEYRGLAKLKSTY 640 QT+LFE G+ +K G + +E V E L+ P + YR KL T Sbjct: 650 QTVLFETLGLPHTRKIKSGYSTDAESVTELLSKISPESDGAAFLGALAAYRDNIKLAQTV 709 Query: 641 TDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFI-APE-- 697 + GRVHT++ Q +TGRLSST PNLQNIP+R EEGRRIR AFI APE Sbjct: 710 EGLQKAAT--EDGRVHTTFQQGAASTGRLSSTAPNLQNIPIRTEEGRRIRGAFIVAPEPI 767 Query: 698 DYV----IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQ 753 D V +++ADYSQIE+RIM HL+ D+ L+ A+ G+D+HR +EVFG+ E VT EQ Sbjct: 768 DGVEYEGLLTADYSQIEMRIMVHLAADEKLIAAYEAGEDLHRYVGSEVFGVAPEDVTPEQ 827 Query: 754 RRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQG 813 R KA+++GL YG+S FGLA+QLNI EA + YF+R+ V ++ QA + G Sbjct: 828 RSKVKAMSYGLAYGLSRFGLAKQLNISSDEAGELRTNYFKRFGRVGRFLRGVLKQAHQDG 887 Query: 814 YVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPR 873 Y ET+ GRR LPD+ S N RR AAERAA+NAP+QGTAADIIK AMI + L+ E + Sbjct: 888 YTETIFGRRRVLPDLDSPNRVRREAAERAALNAPIQGTAADIIKIAMINIHRRLREEGLK 947 Query: 874 VRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 RM++QVHDE++ EV + +A + + + M L VPL V+VG G++W +A Sbjct: 948 TRMLLQVHDEIILEVATGEREAAERVLVEEMSGAASLRVPLDVQVGWGKSWQEA 1001 >UniRef50_Q14QK7 DNA polymerase I n=1 Tax=Spiroplasma citri RepID=Q14QK7_SPICI Length = 869 Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust. Identities = 305/929 (32%), Positives = 476/929 (51%), Gaps = 80/929 (8%) Query: 9 LILVDGSSYLYRAYHAFP----PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 ++L+DG+S L+RA++A L + G PT A+Y NML ++ V FD Sbjct: 4 VLLIDGNSLLFRAFYATAYNGEMLKSLDGTPTNAVYAFTNMLNKILKANNYYSVVVAFDK 63 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 K FR +L YK R P++L Q + + + +P L G EADD++G LA Sbjct: 64 GKKNFRHDLLVDYKDGRSKTPNELIVQFPIVKEFLDSYQIPYLEQEGYEADDLLGCLAML 123 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLI---NTMTNTILGPEEVVNKYGVPPELIIDFLA 181 AEK V I + DKD+ QL+T ++ + ++ ++ K+G+ P + D Sbjct: 124 AEKEDFYVDIFSSDKDLYQLITNKTNILVPRQGDSADVIDEAALIAKWGIKPLQVPDLKG 183 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGD SDN+ GVP VGEKTA L++ ++ LY E I G + L +KE Sbjct: 184 LMGDPSDNLKGVPKVGEKTAIKLIKEYHSIENLYDNIEHIKG-------ALQQNLLNHKE 236 Query: 242 VAYLSYQLATIKTDVELE-LTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 A L ++ATI D+ LE T P E L+ + KY + + + + Sbjct: 237 SALLCKKIATIFCDINLEHFTFTSFS---PNHETLMQFYLKYNMNSFVTKLFNNQDNDIQ 293 Query: 301 GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWI---AKLEKAPVFAFDTE 357 + K E + E E TV Y+ +LDE + I + VF FD Sbjct: 294 NSNIKVKIIEEWRS-EFNENNTTV-----YLELLDENYHTSEIIGFGIVNSKGVFYFD-- 345 Query: 358 TDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKV 417 YI HD +L L D K K+ Sbjct: 346 ------------------------YIHAKHD--------------KLWHQFLNDNKYQKL 367 Query: 418 GQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIA 477 + K LA I ++ I +D ML Y+ NS A ++ +D+ + K + +T E Sbjct: 368 TYHAKSLIVALARDNIFVQNIEYDMMLAGYVYNSNA-KNSLDTYINLFEKKQILTDEFFY 426 Query: 478 GKG-KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPV 536 GKG K Q+ + I L G + E A +L K+ +L K +++ NIE+P+ Sbjct: 427 GKGVKKQIPADVIKL---GHFIGEKASYIHKLRPKII-ELLKTNQQYDLYHNIELPIAFA 482 Query: 537 LSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGI 596 L+R+E NGVK+D L + + + EL + ++IA +E N +S KQ+ +LF+ + Sbjct: 483 LARMEINGVKVDQYELTTQTLRIEKIVQELNNEINDIAQKEINPNSPKQISELLFQNFSL 542 Query: 597 KPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVH 656 KK ST++E LEE+ ++ + IL+YR KL STY + I G+VH Sbjct: 543 PDRKK-----GSTAQETLEEIKNNHVIIPKILDYRKYQKLYSTYLKGMEKYIFA-DGKVH 596 Query: 657 TSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE-DYVIVSADYSQIELRIMA 715 T Y Q +T TGRLSS +PN+QNI +R+ + +R+ F+ D +++S DYSQIELRI+A Sbjct: 597 TIYKQTLTNTGRLSSVEPNMQNISIRDHIQKEVRKIFVVSSPDNILLSCDYSQIELRILA 656 Query: 716 HLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLAR 775 H+S+D+ L+ AF +DIH TA ++F L + +T RRSAKA+NFG+IYG+S FGLA Sbjct: 657 HMSKDQDLIAAFNNNEDIHTNTAMKIFNLSKDEITPNIRRSAKAVNFGIIYGISDFGLAT 716 Query: 776 QLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGAR 835 LNI +A+ ++ Y++++P + ++++ K+ GYV T+ R+ Y+ +I N + Sbjct: 717 DLNISVAKAKAIINNYYQQFPTIKAFIDKQVEFCKQNGYVTTIFNRKRYVSEINDRNYMQ 776 Query: 836 RAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDA 895 R +R A+N P+QG+AADIIK A+ +D + ++I Q+HDEL+FE+ + ++ Sbjct: 777 REFGKRIAMNMPIQGSAADIIKIALKNIDQEFLKLNLKAKIIAQIHDELIFEIPQVELIQ 836 Query: 896 VAKQIHQLMENCTRLDVPLLVEVGSGENW 924 V K + LME+ T+LDV L+V++ +G +W Sbjct: 837 VQKIVKILMEDSTKLDVKLIVDMKTGLSW 865 >UniRef50_B8DUU4 DNA polymerase I n=16 Tax=Bifidobacterium RepID=B8DUU4_BIFA0 Length = 960 Score = 447 bits (1150), Expect = e-124, Method: Compositional matrix adjust. Identities = 327/974 (33%), Positives = 491/974 (50%), Gaps = 70/974 (7%) Query: 3 QIPQNPLILVDGSSYLYRAYHAFPPLTNSA--GEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 Q + L+++DG S +RA++A P SA G+ T A+YG ML +I KP V Sbjct: 6 QGTRGTLLVIDGHSLAFRAFYALPAENFSAKDGQATNAVYGFFTMLSQVIASQKPDLLGV 65 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 FD KG TFR+++ YK R P++L +QI + M++A G+ + G E DDVI T Sbjct: 66 AFDVKGGTFRNKMLTQYKGTREAAPEELISQIPLIQDMLEAFGVTYVTKQGYEGDDVIAT 125 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELI 176 LA E A + +GD+D QL+ +IT++ + + P+ V +KY V P Sbjct: 126 LATMGEHADYRTYVLSGDRDAFQLIDDDITVLYPGYHFKELKAMTPQAVEDKYHVTPRQY 185 Query: 177 IDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKL 236 D AL G+++DNIPGVPGVG+ A + GGLD + ++I +G K A L Sbjct: 186 PDLAALRGETADNIPGVPGVGDGFAAKWINQYGGLDGVIEHADEI-----KGKKGDA--L 238 Query: 237 EQNKEVAYLSYQLATIKTDVELELTCEQL---EVQQPAAEELLGLFKKYEF-----KRWT 288 ++ E L+ ++ + D++L + L +V AEEL F + F + Sbjct: 239 RESIEQIRLNRKVNALVRDLDLGVDIADLTFGKVDPAKAEEL---FNQLNFGARIRSKLL 295 Query: 289 ADVEAGKWLQ--AKGAKPAAKPQ-ETSVADEAPEVTATVISYDNYVTILDE-ETLKAW-- 342 AG Q AK A A + + E D + + +V + V +D +L+AW Sbjct: 296 KTFNAGDPGQPVAKKASDAERFEFEGEFDDGSFDTPESVRVQEPVVDEIDAPASLEAWAQ 355 Query: 343 ----IAKLEKAPVFAFDT--ETDSLDNISANLVGLSFAI------EPGVAAYIPVA---- 386 IA + D E D+ V S+++ +PG ++ +A Sbjct: 356 QHCPIASGKSISSTTLDVVGEYDAQSQQCVEAVEGSWSLFASGSPKPGRSSISGLALMAD 415 Query: 387 -HDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLE 445 H + P E+ L+ +L+ A K +L + L + FDT L Sbjct: 416 GHAVVVDPHD---EQYHMALQRILDTYAATLSVHGYKEHLHMLGAVNLRLPMVLFDTNLA 472 Query: 446 SYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALE----EAGRYAAED 501 Y+++ + A+ +L EE+ + L I ++ E R + Sbjct: 473 GYLIDPDFQGGSLQDCADHFLHRHA---EEVTETEQGTL---DIGMDDERAERDRKVVRN 526 Query: 502 ADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTL 561 A + L + L++ + ++ +IE+P L +E G +D L E T Sbjct: 527 AAIVSLLARTLARQLEQ-RCQYSLLRDIELPTSVALFHMEHTGASVDRARLDELLEMFTD 585 Query: 562 RLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVL------- 614 +E+ +E AG E NL S KQL +LFE+ G+ P KKT G+ ST+ + L Sbjct: 586 ESNRMEQICYEAAGHEVNLQSPKQLGVVLFEEMGLNPTKKTKRGSYSTNAKALTTLYATS 645 Query: 615 EELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDP 674 EE + +L +R + KL+ L INP+ GR+HT++ Q V ATGRLSS DP Sbjct: 646 EEGSRPNEFLGALLRHREVNKLRQI-VQTLIDAINPRDGRIHTTFTQTVAATGRLSSVDP 704 Query: 675 NLQNIPVRNEEGRRIRQAFIAPEDYV-IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDI 733 NLQNIP RN GR IR AF+ E + ++SADYSQ+ELRIMA LS D+ L+ AF G D Sbjct: 705 NLQNIPNRNATGRDIRSAFVPGEGFADLLSADYSQVELRIMADLSGDEALIKAFKSGADF 764 Query: 734 HRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFE 793 HR A+ V+G+P++ VT +QR KA+++GL YG+S +GL++QL IP KEA YF+ Sbjct: 765 HRYVASMVYGIPVDEVTPDQRNHVKAMSYGLAYGLSTYGLSQQLGIPSKEAAALRSRYFQ 824 Query: 794 RYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAA 853 + V +Y+E + A+ GY +T+ GRR Y P + S+N R AAER A+NAP+QGTAA Sbjct: 825 TFGKVHDYLESLVSNARNTGYTQTMFGRRRYFPALTSANRVARDAAERGALNAPIQGTAA 884 Query: 854 DIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVP 913 DI+K AMI VD L+ R+++Q+HDELV E+ + V + + ME+ + VP Sbjct: 885 DIMKIAMIRVDRALRDGNLNSRIVLQIHDELVVELAPGEEKRVTELVRDAMEHAVNIAVP 944 Query: 914 LLVEVGSGENWDQA 927 L V G G +W QA Sbjct: 945 LDVSTGVGSDWQQA 958 >UniRef50_C7LZ56 DNA polymerase I n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZ56_ACIFD Length = 886 Score = 442 bits (1136), Expect = e-122, Method: Compositional matrix adjust. Identities = 330/926 (35%), Positives = 473/926 (51%), Gaps = 85/926 (9%) Query: 19 YRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKTFRDELFEH 76 +RA++A P + +G T A++G +ML +++ Q +PTH AV DA+G TFRD + E Sbjct: 25 FRAFYALREPMMRTESGVATNALFGFASMLANVVAQTRPTHLAVALDAEGPTFRDAILES 84 Query: 77 YKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKAGRPVLIST 136 YK R P PDDLR Q++ +++A+G+P + SG EADDVI TLA A AG I T Sbjct: 85 YKGTRAPTPDDLRQQLDAARGLLEAIGVPAVEASGFEADDVIATLATRARDAGIATRIVT 144 Query: 137 GDKDMAQLV-TPNITLINTMTNT----ILGPEEVVNKYGVPPELIIDFLALMGDSSDNIP 191 GD+D+ QLV P I ++ T +V+ YGVPP D +L GDSSDN+P Sbjct: 145 GDRDLLQLVEDPLIVVLLTRKGVSNLEAFDEAKVLETYGVPPARYGDLASLRGDSSDNLP 204 Query: 192 GVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQLAT 251 GVPG+G KTA ALL ++ + A + LS R + LEQ + + L Sbjct: 205 GVPGIGPKTAAALLDRFESIEGILAH---LDALSARQREA----LEQARSQLLEARLLTQ 257 Query: 252 IKTDV-EL-ELTCEQLEVQQPAAEELLGLFKKYEFKR-WTADVEAGKWLQAKGAKPAAKP 308 ++ DV EL L +L P E L + +E +R + A V A + +P A Sbjct: 258 LRRDVAELPSLDALRLGPWDPRRAETL-MVGTFELRRPFQALVRAFE------GRPTA-- 308 Query: 309 QETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANL 368 DE P V ++ V L + + A + +L A D + + Sbjct: 309 -----GDEPPPV-------ESPVAHLTDVSAAAVVERLAPGATVAVAATFAG-DPGRSRV 355 Query: 369 VGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK-YDRGI 427 V L+ +E V A P DAP + E L + VG K R + Sbjct: 356 VELALGVEGVVWAGSPE-----DAPTHL-----WEALG------SCVLVGAGPKEIVRSL 399 Query: 428 LANYGIELRGIAF-DTMLESYILNSVAGRHDMDSLAERWL-KH---KTITFEEIAGKGKN 482 + + + L A D + ++++S H +D LA RWL +H + E A G Sbjct: 400 VMEHAVPLEPRALVDLEVLGWLVDSADVAHGLDQLARRWLGRHLDDRGPLEAEAAPLGAR 459 Query: 483 QLTFNQIALEEA-GRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 Q + EA R ED +W + ++E+PL VL+ +E Sbjct: 460 QWVEVVHPIREALERRLTED---------DLW----------RLATDVEIPLTRVLTDME 500 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 +GV ID VL EL + AG E N +S +QL +LFE+ G+ +K Sbjct: 501 IHGVAIDRDVLAAIGTELATERDRALAEVRHYAGGELNPNSPRQLAVVLFERLGLPAGRK 560 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 T G ST VLE L +P+ IL +R L KL ST+ + L I GR+H +++Q Sbjct: 561 TKTGY-STDARVLESLRDAHPIVAAILRFRELDKLLSTFYEGLRSEIG-ADGRIHATFNQ 618 Query: 662 AVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDK 721 AV TGR+SS PNLQNIPVR +EG+R R AF+A E +V+V+ADYSQIELR++AHLS D+ Sbjct: 619 AVARTGRISSERPNLQNIPVRTDEGKRFRDAFVATEGHVLVAADYSQIELRVLAHLSGDE 678 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 L+ + D+H AA VFG+P E VT +QR AK + +GL YGM A+GLA++L +P Sbjct: 679 ELVRILSGDGDVHTLVAARVFGVPAERVTPQQRSVAKMVTYGLSYGMEAYGLAQRLGVPP 738 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 EA+ + +F +PG+ Y + + A+ QG+ TL GRR YLPD+ S N R AER Sbjct: 739 AEAEGILADFFAAFPGLRHYRDASVDAARAQGFTTTLLGRRRYLPDLDSPNRTVRQGAER 798 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 A+NA QG AADI K A++ + A L +++QVHDE+V E + V + Sbjct: 799 QAMNAGTQGLAADIFKIALVRLHAALSPTDG--ALVLQVHDEVVVEAVAERAHDVRALVE 856 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQA 927 ++E+ L VPL V+ G G +W +A Sbjct: 857 DVLEHAFALRVPLRVQSGVGRSWGRA 882 >UniRef50_B0TER6 DNA polymerase i n=2 Tax=Heliobacteriaceae RepID=B0TER6_HELMI Length = 939 Score = 437 bits (1125), Expect = e-121, Method: Compositional matrix adjust. Identities = 234/491 (47%), Positives = 328/491 (66%), Gaps = 17/491 (3%) Query: 435 LRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEA 494 + GI D +L +Y+L+ +A R+ + A W+ K T AG+ + + EE Sbjct: 458 IEGIDGDGLLGAYLLDPLANRYSLARSAHDWIGWKVDT---EAGR-------SVLPPEEG 507 Query: 495 GRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHN 554 R AA +T + ++ +G ++ ++E+PL P+L +E G+K++P VL Sbjct: 508 ARAAAALFHMTPVMEARL-----GEEGLCALYRDVELPLAPILGAMEWTGIKVNPAVLQE 562 Query: 555 HSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVL 614 + EL + L+ +++AGE FN++ST+Q ILFEK G+ +K+T G ST EVL Sbjct: 563 MAGELGADIRRLQADIYDLAGESFNINSTQQFGKILFEKLGLPVIKRTKTGY-STDVEVL 621 Query: 615 EELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDP 674 EELA +P+ +LEYR L KLKSTY + L +I+ + GR+HTS++QAVTATGRLSST+P Sbjct: 622 EELADRHPIVPKVLEYRQLMKLKSTYVEGLLPLIDGEDGRIHTSFNQAVTATGRLSSTEP 681 Query: 675 NLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDI 733 NLQNIPVR E+GRRIR+AF AP +D+ +++ADYSQIELRI+AHLS D AFA+ +DI Sbjct: 682 NLQNIPVRLEQGRRIRKAFTAPGDDWTLLAADYSQIELRILAHLSGDPSFKDAFAKNQDI 741 Query: 734 HRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFE 793 H TA+EVFG+P+E VTSE RR AKA+NFG++YG+S FGL+R L + R EA++Y+D YF+ Sbjct: 742 HTRTASEVFGVPMENVTSEMRRRAKAVNFGIVYGISDFGLSRDLGVLRAEARQYIDGYFD 801 Query: 794 RYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAA 853 RY GV Y++ A+A+ QGYV TL GRR LPD+ N R+ ERAA+N P+QGTAA Sbjct: 802 RYSGVKGYIDEIIAEARRQGYVTTLLGRRRRLPDLFVKNKIRQNFGERAAMNTPIQGTAA 861 Query: 854 DIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVP 913 DIIK AM+ + L A+ + RM++QVHDEL+FE K+++ A I + ME RLDVP Sbjct: 862 DIIKAAMVRIPGLLAAKGLKTRMLLQVHDELIFEAPKEELSEAAALIRETMEQTIRLDVP 921 Query: 914 LLVEVGSGENW 924 L V+V +G NW Sbjct: 922 LTVDVKTGPNW 932 Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 109/281 (38%), Positives = 157/281 (55%), Gaps = 11/281 (3%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 +++DGSS L+RA++A P ++ S G T A+YG L ML L +Y+P AV D T Sbjct: 6 FMVIDGSSLLHRAFYALPLMSTSQGVHTNAVYGFLTMLERLRREYQPDFLAVCLDKSRIT 65 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 R + +E YK+ R P++LR Q L ++ A +PL G EADD+IG L A+K Sbjct: 66 HRTQRYEAYKAQRGATPEELRPQFGLLKEVLAAWRIPLFEEEGYEADDLIGALVCLAKKQ 125 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNTI----LGPEEVVNKYGVPPELIIDFLALMG 184 G LI TGD+D QL++P + ++ T E + K G+ P ++D+ LMG Sbjct: 126 GIDSLIVTGDRDAWQLISPGVEVLFTRKGISELERYDEEALKAKIGLTPRQVVDWKGLMG 185 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 D SDNIPGVPGVGEK A LL+ G +D+LY +++ G + KL ++E A+ Sbjct: 186 DPSDNIPGVPGVGEKRAFKLLEQFGDMDSLYERLDEVKG-------KLKEKLATHREQAF 238 Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFK 285 LS +LATI+ ++ LE E P L L+KK EF+ Sbjct: 239 LSRELATIQCNIPLEPDWEACRAASPDFPALRRLYKKLEFR 279 >UniRef50_D1PTJ0 DNA-directed DNA polymerase I (Fragment) n=1 Tax=Prevotella bergensis DSM 17361 RepID=D1PTJ0_9BACT Length = 661 Score = 435 bits (1119), Expect = e-120, Method: Compositional matrix adjust. Identities = 275/683 (40%), Positives = 390/683 (57%), Gaps = 47/683 (6%) Query: 9 LILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L L+D + ++R+Y+AF P NS G T A+ G N L +I + PTH V FD G Sbjct: 4 LFLLDAYAIIFRSYYAFIKRPTINSKGLNTSAILGFCNTLNEIIEKENPTHIGVAFDY-G 62 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 KTFR E F YK+ R P+D++ + + ++KAM +P+L V+G EADDVIGTLA +A Sbjct: 63 KTFRHEAFPPYKAQREATPEDIKLSVPHIQDILKAMHIPILQVNGFEADDVIGTLATQAA 122 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTN---TILGPEEVVNKYGVPPEL-IIDFLAL 182 + G + T DKD QL+ ++ + +G +E+ KYG+ +ID LAL Sbjct: 123 EKGIETYMLTPDKDYGQLIRQHVYMFRPRHGGGYDKIGEKEIQAKYGIASAAQVIDLLAL 182 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 MGDSSDN PG PGVGEKTA L+ G + L +++ G M K+E + Sbjct: 183 MGDSSDNYPGCPGVGEKTAVKLIHEFGTCENLIENSDQLKG-------KMREKVENAVDD 235 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 +S LATI+TDV +EL ++L++ P EL +F + EF+R A K+L Sbjct: 236 IKMSKFLATIRTDVPIELNLDELKMTSPDEAELHKIFTELEFRRL-----AKKFLNKGEE 290 Query: 303 KPAAKPQETSVADEAPEVTATVISYD----------NYVTILDEETLKAWIAKLEKAPVF 352 K + + ++ +E P T + + +Y I ++E + L + Sbjct: 291 KITSDNLQLNLFEENPTKTTSEPKFSTFESLKTTSHHYKLIDNQEEARKLCDFLRTNKIL 350 Query: 353 AFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALE---LLKPLL 409 + DTET S + A LVGLSF+++ A Y+ + D RE AL+ + KPL Sbjct: 351 SLDTETTSTSPMEAELVGLSFSVKEKEAFYVAIPKD---------REEALQYVNIFKPLY 401 Query: 410 EDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHK 469 ED + LKVGQN+KYD +L NYG++++G FDTML Y++ RH+MD +AE L ++ Sbjct: 402 EDPEILKVGQNIKYDYVVLRNYGVDIQGKMFDTMLAHYLIQPEL-RHNMDYMAETLLHYQ 460 Query: 470 TITFEEIAG-KGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFEN 528 T+ EE+ G KGK Q ++ EE YAAEDAD+TL+L + P L K G ++F + Sbjct: 461 TMHIEELIGPKGKGQKNMRDLSPEEIYEYAAEDADITLRLKNVLEPQL-KEVGAKSLFWD 519 Query: 529 IEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQT 588 IEMPLV VL+ +E NGV +D + L+ T R+ + E+ A E+AGEEFN+SS KQ+ Sbjct: 520 IEMPLVKVLADMELNGVLLDTESLNEIERTFTERMQQYERHAFELAGEEFNISSPKQVGE 579 Query: 589 ILFEKQGI--KPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPL 646 ILF K I KP KKT G TSEEVL +L P+ + IL YRG+ KL TY + LP Sbjct: 580 ILFGKMKIVDKP-KKTKTGQFVTSEEVLLQLKDKAPIVEDILNYRGMKKLLGTYVEALPK 638 Query: 647 MINPKTGRVHTSYHQAVTATGRL 669 +INP+TG +HTS++QAVTATGRL Sbjct: 639 LINPRTGHIHTSFNQAVTATGRL 661 >UniRef50_Q2SRK9 DNA polymerase I n=4 Tax=Mollicutes RepID=Q2SRK9_MYCCT Length = 911 Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust. Identities = 285/933 (30%), Positives = 479/933 (51%), Gaps = 90/933 (9%) Query: 8 PLILVDGSSYLYRAYHA--FPP----LTNSAGEPTGAMYGVLNMLRSLIMQYKP-THAAV 60 +++VDG+S ++RA++A + P L +G T A+Y +NML S+I Q P H + Sbjct: 4 KILVVDGNSLIFRAFYATAYSPNTSLLKTKSGVLTNAVYSFINMLLSVIHQRGPYDHILI 63 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 FD KTFR +L YK++R P++L Q + + + +EADD+ G+ Sbjct: 64 AFDKGKKTFRHDLLSDYKANRIKTPNELVEQFSIVREFLTKANIQWFEQENIEADDIAGS 123 Query: 121 LAREAEKAGRPVL--ISTGDKDMAQLVTPNITLINTM--TNTI--LGPEEVVNKYGVPPE 174 + + AEK + I + DKDM QL+T + +N + N + + ++ K+ + P Sbjct: 124 ICKYAEKQFDNLQAEILSSDKDMYQLITNKVICLNPVQGVNELEEVDTNKLFEKWQILPN 183 Query: 175 LIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAA 234 + D+ A++GDSSDN+ GV G+G+K A L+Q L+ +Y E+I G + Sbjct: 184 QVPDYKAIVGDSSDNLKGVNGIGQKGAIKLIQQYQNLENIYNNLEQIKG-------AIKT 236 Query: 235 KLEQNKEVAYLSYQLATIKTDVELE-LTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEA 293 KLEQ+K++A+L LATIKTDV LE + ++L+ E L ++ Y K+ ++ Sbjct: 237 KLEQDKKMAFLCKDLATIKTDVTLENFSFKKLDFNVDNIYEFLNKYEMYSLKKRFTNILN 296 Query: 294 GKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFA 353 D P Y N LD + +W E + + Sbjct: 297 --------------------LDFNP--------YQNKKQNLDVRIINSWSKDYEDSINYL 328 Query: 354 FDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALE---------L 404 + E+ D ++G+ + G + YLD ++ + E L Sbjct: 329 Y-VESLEEDYHKDKIIGIGISNNKG--------NFYLDFKNKAQQLSFFEDTTLSSTDSL 379 Query: 405 LKPLLEDEKALKVGQNLKYDRGILAN--YGIELRGIAFDTMLESYILNS--VAGRHDMDS 460 + L + K ++K +L N Y + FD M+ Y LN+ V+ + Sbjct: 380 FEEFLNNSNLKKYTYDIKKTTYLLKNHKYNVLASNFDFDFMVACYSLNANVVSDLSNQIK 439 Query: 461 LAERWLKHKTITFEEIAGKG--KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQK 518 L + ++ +TI +EI GKG KN I L+ +Y ++ A + + ++ L K Sbjct: 440 LVDNLIELETI--DEIFGKGVKKNP----DIDLDIKSKYISKKAYLLKKYSDQLIEQL-K 492 Query: 519 HKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEE- 577 +++ I+ PL+ VL IE G+ ID + L ++++ ++ +E + + EE Sbjct: 493 QTNTYDLYLKIDHPLIEVLYDIEVQGILIDKEQLKLQTQQILKKINHIEWQMKILVAEEI 552 Query: 578 ---FNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLA 634 FN SS KQ+Q +LF+K + L+K +TS+EVLE+L +P+ ++LE+R Sbjct: 553 DNNFNFSSPKQIQELLFDKLKLPNLEK-----GTTSKEVLEKLITYHPIINLLLEHRKYT 607 Query: 635 KLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFI 694 KL +TY I +VHT ++ +T TGRLSS+ PN+QNI +R+ E + +R+ FI Sbjct: 608 KLYTTYLKGFEKFI-FDDNKVHTIFNHTLTNTGRLSSSYPNIQNISIRDNEQKEVRKIFI 666 Query: 695 APEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQR 754 + +S DYSQIELR++A +S++ L+ AF + DIH A +F L + +TSEQR Sbjct: 667 TNNNKTFLSYDYSQIELRVLAQMSKETNLINAFNQNADIHLQAAKLIFNLSDDQITSEQR 726 Query: 755 RSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGY 814 R AK NFG++YG++ FGLA LN+ +A++ + Y+ +P +L++ E+ A +GY Sbjct: 727 RIAKVFNFGILYGLTDFGLASDLNMNVNQAKQMIKDYYSAFPSLLDFKEKQVEIATSKGY 786 Query: 815 VETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRV 874 + TL RR Y+ ++ S+N R +R A+N P+QGTA+DI+K AMI++ L+ + Sbjct: 787 ITTLSNRRRYINELNSTNHNIRQFGKRIAVNTPIQGTASDILKVAMISIYKKLKEQNLDA 846 Query: 875 RMIMQVHDELVFEVHKDDVDAVAKQIHQLMENC 907 ++I Q+HDE++ EV + ++ K + +EN Sbjct: 847 KIICQIHDEIILEVDDNQLEQTKKIVVSELENA 879 >UniRef50_A8SN89 DNA polymerase I n=2 Tax=Clostridiales Family XI. Incertae Sedis RepID=A8SN89_9FIRM Length = 888 Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust. Identities = 214/485 (44%), Positives = 321/485 (66%), Gaps = 5/485 (1%) Query: 441 DTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAE 500 D M+ Y+++S G +D+ ++ +L + + +E+ GKGKN+ TF ++ + ++ ++ Sbjct: 404 DVMILEYLIDSNKGNYDILKVSNEFLNLEILDLKEMLGKGKNKKTFFELEEDIIFKFISQ 463 Query: 501 DADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELT 560 + L+ ++ + K ++++EN+E PLV VL+ +E+ GV +D + +EE + Sbjct: 464 NVFAISALY-DIFIEKAKENNLISLYENVEKPLVKVLADMEKTGVLVDRNKIIELNEEYS 522 Query: 561 LRLAEL-EKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELAL 619 +LA L E+K +E+AGE FNL+S KQL ILFEK G+ +KKT G ST EVLE+L+ Sbjct: 523 -KLAYLYEQKVYELAGEVFNLNSPKQLGVILFEKIGLPVVKKTKTGY-STDVEVLEKLSK 580 Query: 620 DYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNI 679 + + IL+YR L KL STY D + I GRV TS+ Q +TATGRLSS DPNLQNI Sbjct: 581 KHEIVDYILKYRSLNKLISTYLDGILEYI-MDDGRVRTSFKQMITATGRLSSVDPNLQNI 639 Query: 680 PVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAA 739 P+R+EEG+ IR+ F+A ++ V + ADYSQIELR++AHLS+D ++ +F DIH TA+ Sbjct: 640 PIRSEEGKNIRKVFVADKNKVFIDADYSQIELRVLAHLSKDSVMIDSFKNDLDIHYKTAS 699 Query: 740 EVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVL 799 EVFG+P+ VT QRRSAKA+NFG++YG+S +GL++ LNI R EA++Y+D Y YP + Sbjct: 700 EVFGVPINEVTDNQRRSAKAVNFGIVYGISDYGLSKDLNITRNEARQYIDGYLNTYPSIK 759 Query: 800 EYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRA 859 YME +AK+ G+V T+ R+ Y+P+I S N R+ ER A+N P+QG+AADIIK A Sbjct: 760 SYMEEIVNKAKKDGFVTTILDRKRYIPEINSKNFNIRSFGERIALNTPIQGSAADIIKLA 819 Query: 860 MIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVG 919 MI V L+ E+ ++I+Q+HDEL+ E + + + V K + MEN +LD+PL V++ Sbjct: 820 MIKVYERLKIEKVNAKLILQIHDELIVECEESEKETVKKILKNSMENVYKLDLPLKVDIC 879 Query: 920 SGENW 924 G NW Sbjct: 880 EGRNW 884 Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 106/281 (37%), Positives = 147/281 (52%), Gaps = 11/281 (3%) Query: 8 PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 ++L+DGSS ++RA++A LT G +YG LNM + PTH V FD K Sbjct: 15 KILLIDGSSLIFRAFYAIRNLTTKDGVFVNGVYGFLNMYYKALELINPTHIFVAFDKGSK 74 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 TFR F YK R P+++ Q L ++ +M + L + EADD+IGT+A+ A+K Sbjct: 75 TFRHNEFADYKGTRDNAPNEITYQFGILKDLLSSMNVNYLELDEYEADDIIGTIAKLAQK 134 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPELIIDFLALM 183 G V I TGD+D QLV NI + T ++ E ++ +Y + P+ +ID AL Sbjct: 135 EGFEVDIFTGDRDYLQLVDDNILVYLTKKGISEIKLMNTESILEEYDLSPKQLIDVKALQ 194 Query: 184 GDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVA 243 GDSSDNIPGV GVGEKTA L+Q G L+ LY + + G + L K+ A Sbjct: 195 GDSSDNIPGVKGVGEKTALKLIQEYGNLENLYENIDNLKG-------KLKENLVNEKDKA 247 Query: 244 YLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEF 284 YLS L I V +E E E++ E L +K EF Sbjct: 248 YLSRYLGEIFLRVPIERNIEDFEIKDVNYNEYLKKLEKLEF 288 >UniRef50_C9LLQ0 DNA polymerase I n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLQ0_9FIRM Length = 858 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 212/411 (51%), Positives = 279/411 (67%), Gaps = 2/411 (0%) Query: 518 KHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEE 577 K G ++FE IE PL VL+ +E+ G+ D K EL ++ +L +E AGEE Sbjct: 448 KSNGVQSLFEKIENPLAAVLAEMEKAGIATDQKRWEAVCHELKVQERKLLSLIYEAAGEE 507 Query: 578 FNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLK 637 FN++S KQL ILFEK G+ KKT G ST+ +VLE LA YP K ILEYR ++KL Sbjct: 508 FNVNSPKQLGVILFEKMGMPAGKKTKNGY-STAADVLEMLAKSYPFVKDILEYRTISKLI 566 Query: 638 STYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE 697 STY + LPL+I P+TGR+HTS++Q VTATGRLSS+DPNLQNIPVR EGR+IR F+ Sbjct: 567 STYLEALPLLIRPETGRIHTSFNQTVTATGRLSSSDPNLQNIPVRTAEGRQIRSLFVPGP 626 Query: 698 DY-VIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRS 756 Y +S+DYSQ+ELR++AH+S D+ L+ AF +DIHR TAAEV G+P E VTSEQR Sbjct: 627 GYDCFISSDYSQVELRVLAHMSGDESLIRAFRNKEDIHRRTAAEVLGIPFEEVTSEQRSH 686 Query: 757 AKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVE 816 AKA+NFG+IYG+S FGLA QL I R EA Y+ YFERYP + +M+ A+E G + Sbjct: 687 AKAVNFGIIYGISDFGLANQLGISRGEAGTYIKKYFERYPYIHAFMKSMVEDAQESGRAK 746 Query: 817 TLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRM 876 TL GR LPDI+SSN RR+ AER A+N P+QGTAADI+K AMI V ++ E + R+ Sbjct: 747 TLFGRYRELPDIRSSNFNRRSFAERTAMNTPIQGTAADIMKLAMIEVSRRIKEEGYKSRV 806 Query: 877 IMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 ++QVHDELV E ++ + + + + ME+ L VPL+ +V G+NW +A Sbjct: 807 LLQVHDELVVEAVSEEKENLKTLLKETMESVVELKVPLIADVHEGKNWAEA 857 Score = 218 bits (556), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 126/286 (44%), Positives = 166/286 (58%), Gaps = 16/286 (5%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 + L++VDGSS LYRA+ PPL+ G PT A+ G LNML + + P + AV FD Sbjct: 2 EKKLVVVDGSSLLYRAFFGLPPLSYH-GIPTNAVMGFLNMLYDIYKNFDPEYMAVSFDKN 60 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 +TFR E+++ YK+ R P P +L Q + ++ +G + V G E DD++GTLA Sbjct: 61 KQTFRSEVYKEYKATRKPAPPELVPQFALIREALRTLGAAVYEVDGYEGDDILGTLAARY 120 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPELIIDFLA 181 EK PV I TGD+D QL T + T+ T + PE VV KYG+ P +ID A Sbjct: 121 EKE-LPVFIVTGDRDALQLATKDTTVYITQRGVSQMAAMTPEAVVEKYGITPRQVIDMKA 179 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGD+SDNIPGVPGVGEKTA LL LD LY +I G + +L NKE Sbjct: 180 LMGDTSDNIPGVPGVGEKTAAKLLSQYQTLDNLYGHVGEIKG-------AVGKRLAANKE 232 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAA-EELLGLFKKYEFKR 286 +AYLSY+LATIKTDV E E E++QP EE++ F + +R Sbjct: 233 LAYLSYRLATIKTDVPFEAALE--EMKQPVHFEEMMEFFHRLGLER 276 >UniRef50_C7GEY2 DNA polymerase I n=6 Tax=Clostridiales RepID=C7GEY2_9FIRM Length = 930 Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust. Identities = 223/498 (44%), Positives = 325/498 (65%), Gaps = 24/498 (4%) Query: 440 FDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGR--- 496 FD +L +Y+LN + + + +A+ ++ + ++ GK LT Q A+++A Sbjct: 446 FDGVLAAYLLNPLKNEYPYEDIAKDYMGQMIPSKADLLGK----LTIEQ-AMKDAPEAFL 500 Query: 497 -------YAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDP 549 Y A+ + TL+ LK +G ++F IEMPLV L+ +E G+ Sbjct: 501 NYVCYMAYVAQASKKTLETDLK-------EEGMDHLFTEIEMPLVFTLADMENEGIIACR 553 Query: 550 KVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPST 609 + L + ++L +R+AELEK+ +E AGEEFN++S KQL ILFEK + KKT G ST Sbjct: 554 EALTEYGDKLAVRIAELEKQIYEEAGEEFNINSPKQLGVILFEKLSMPYGKKTKTGY-ST 612 Query: 610 SEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRL 669 + +VL+ LA +YP+ ILEYR L KLKSTY D L I K GR+HTS++Q +TATGRL Sbjct: 613 AADVLDRLAPEYPIVSDILEYRQLTKLKSTYADGLVNYI-AKDGRIHTSFNQTITATGRL 671 Query: 670 SSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAE 729 SST+PNLQNIP+R E GR IR+AF+ E + + ADYSQIELR++AH+S D+ L+ A+ E Sbjct: 672 SSTEPNLQNIPMRIELGRLIRKAFVPKEGFEFMDADYSQIELRVLAHMSGDEKLIEAYRE 731 Query: 730 GKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMD 789 +DIHR TA++VF +P + VT QRR+AKA+NFG++YG+S+FGL++ L+I +KEA +Y++ Sbjct: 732 AQDIHRITASQVFHIPFDEVTDLQRRNAKAVNFGIVYGISSFGLSQDLSISKKEAAEYIE 791 Query: 790 LYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQ 849 YFE YP + +++ A+AKE+GYV T+ GRR +P++ SSN +R+ ER A+N+P+Q Sbjct: 792 RYFETYPKIKTFLDGLVAEAKEKGYVTTMFGRRRPVPELSSSNFMQRSFGERVAMNSPIQ 851 Query: 850 GTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTR 909 GTAADIIK AMI V L E + R+I+ VHDEL+ E ++ DAV K + + M Sbjct: 852 GTAADIIKIAMIRVHDRLLKENLKSRLILTVHDELLVETAIEEEDAVRKILEEEMHGAAD 911 Query: 910 LDVPLLVEVGSGENWDQA 927 L V L ++ G+NW +A Sbjct: 912 LAVTLEIDAHVGKNWYEA 929 Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 111/287 (38%), Positives = 167/287 (58%), Gaps = 17/287 (5%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 L+L+DG S L RA+ P LTNS G T A+YG LN++ ++ + +P + V FD T Sbjct: 9 LVLIDGHSILNRAFFGIPDLTNSEGLHTNAVYGFLNIMFKILEEEQPDYLTVAFDVSEPT 68 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR ++F YK R PM +LR Q+ + M+KAMG+ + G EADD++GT+A+++E+ Sbjct: 69 FRHKMFAEYKGTRKPMAQELREQVPLMKEMLKAMGVTTIEKGGYEADDLLGTIAKQSEQK 128 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNTILGPE-------EVVNKYGVPPELIIDFLA 181 G V + +GD+D+ QL T +I + T G E EV KY V P ID A Sbjct: 129 GLTVSVVSGDRDLLQLATDHIKIRIPKTKRT-GTEIEDYNAAEVQEKYQVTPIEFIDVKA 187 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGD++DNIPGVPG+GEKTA A++ G ++ YA +++ R +K L++ + Sbjct: 188 LMGDTADNIPGVPGIGEKTATAIIAQYGSVENAYAHVDELK--PPRASKN----LKEYYD 241 Query: 242 VAYLSYQLATIK--TDVELELTCEQLE-VQQPAAEELLGLFKKYEFK 285 +A +S LATI+ D++ +L+ +L + EE L K+ EFK Sbjct: 242 LAQMSKTLATIEIHADIDYDLSGAKLNGISSLYTEEAYLLCKRLEFK 288 >UniRef50_Q3ABL3 DNA polymerase I n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ABL3_CARHZ Length = 831 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 203/404 (50%), Positives = 283/404 (70%), Gaps = 2/404 (0%) Query: 525 VFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTK 584 +F IE+PL PVL+++E G+++D + L S EL ++ EL ++ + +AGEEFNL+S + Sbjct: 428 LFYEIELPLTPVLAQMEHTGIQVDREALKEMSLELGEQIEELIREIYVLAGEEFNLNSPR 487 Query: 585 QLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKL 644 QL ILFEK G+ +KKT G ST EVLEEL + + IL YR L KLKSTYTD L Sbjct: 488 QLGVILFEKLGLPVIKKTKTGY-STDAEVLEELLPFHEIIGKILNYRQLMKLKSTYTDGL 546 Query: 645 PLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY-VIVS 703 +IN +TG++HT+++Q T TGRL+S++PNLQNIP+R E GR++R+ FI Y IVS Sbjct: 547 MPLINERTGKLHTTFNQTGTLTGRLASSEPNLQNIPIRLELGRKLRKMFIPSPGYDYIVS 606 Query: 704 ADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFG 763 ADYSQIELR++AH S + L+ A+ +G+DIHR TA+EVFG+ LE VT E R AK++NFG Sbjct: 607 ADYSQIELRLLAHFSEEPKLIEAYQKGEDIHRKTASEVFGVSLEEVTPEMRAHAKSVNFG 666 Query: 764 LIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRL 823 ++YG+S FGL R L IPR+ A KY+ YF YP V EY++ A+E+GYV TL GRR Sbjct: 667 IVYGISDFGLGRDLKIPREVAGKYIKNYFANYPKVREYLDELVRTAREKGYVTTLFGRRR 726 Query: 824 YLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDE 883 Y+P++ S N + ER A+N P+QG+AADIIK AMI V+ L+A + + R+++ VHDE Sbjct: 727 YIPELSSKNRTVQGFGERTAMNTPLQGSAADIIKLAMINVEKELKARKLKSRLLLSVHDE 786 Query: 884 LVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 LV EV ++++ V + +ME+ L VPL+ EVG+G+NW +A Sbjct: 787 LVLEVPAEELEEVKALVKGVMESVVELKVPLIAEVGAGKNWYEA 830 Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 115/288 (39%), Positives = 173/288 (60%), Gaps = 11/288 (3%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 ++LVDG+S L+RA+ A PPL + GEPTGA+YG L ML +I KP + AV FD KT Sbjct: 4 VVLVDGNSLLHRAFFALPPLKTTKGEPTGAVYGFLTMLFRVIKDEKPEYLAVAFDISRKT 63 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR E F YK HR PD+L Q + ++K + +P + + G EADD+IG L+R Sbjct: 64 FRTEQFTAYKGHRKEAPDELVPQFALVREVLKVLNVPYIELDGYEADDIIGHLSRAFAGQ 123 Query: 129 GRPVLISTGDKDMAQLVTPNITLINT---MTNTI-LGPEEVVNKYGVPPELIIDFLALMG 184 G V+I T D+DM QLV + T +T + + ++ YG+ P+ ++D LMG Sbjct: 124 GHEVVIYTADRDMLQLVDEKTVVYLTKKGITELVKMDLAAILENYGLKPKQLVDVKGLMG 183 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 D SDNIPGVPG+GEKTA L++ G ++ + A +++ + KL +++ +A Sbjct: 184 DPSDNIPGVPGIGEKTALDLIKTYGSVEEVLAHKDEL-------KPKLREKLAEHENLAK 236 Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVE 292 +S QLATI ++ LE++ E L+V++P EE+ LF + EFK + ++E Sbjct: 237 ISKQLATILREIPLEISLEDLKVKEPNYEEVAKLFLRLEFKSFLKEIE 284 >UniRef50_C0X9C2 Possible DNA polymerase I (Fragment) n=3 Tax=Firmicutes RepID=C0X9C2_ENTFA Length = 431 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 203/410 (49%), Positives = 283/410 (69%), Gaps = 4/410 (0%) Query: 520 KGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFN 579 K ++F +E+PL +L +E G+++D L E + RL E+E+K + AGEEFN Sbjct: 23 KNQADLFYKMELPLSRILGDMEITGIRVDATRLKEMQVEFSERLKEIEEKIYAEAGEEFN 82 Query: 580 LSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKST 639 L+S KQL ILFEK G+ +KKT G ST+ +VLE+L P+ IL YR +AK++ST Sbjct: 83 LNSPKQLGVILFEKMGLPVIKKTKTGY-STAVDVLEQLKEQAPIVADILTYRQIAKIQST 141 Query: 640 YTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPED- 698 Y + L +I P ++HT Y Q +T TGRLSS DPNLQNIP+R EEGR+IR+AF+ ED Sbjct: 142 YVEGLLKVIQPD-NKIHTRYVQTLTQTGRLSSVDPNLQNIPIRLEEGRKIREAFVPREDN 200 Query: 699 YVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGL-PLETVTSEQRRSA 757 ++I S+DYSQIELR++AH+S D+ L AF EG+DIH +TA VFG+ E VT RR A Sbjct: 201 WLIFSSDYSQIELRVLAHISNDEHLKEAFVEGQDIHASTAMRVFGVEKAEDVTPNMRRQA 260 Query: 758 KAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVET 817 KA+NFG++YG+S +GL++ L I RK+AQ+Y+D YFE+YPGV +YME AK++GYVET Sbjct: 261 KAVNFGIVYGISDYGLSQNLGITRKQAQQYIDTYFEKYPGVKQYMEEIVRDAKDKGYVET 320 Query: 818 LDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMI 877 L RR YL DI S N R+ AER AIN P+QG+AADI+K AMI + L+ E+ + M+ Sbjct: 321 LYHRRRYLSDINSRNFNLRSFAERTAINTPIQGSAADILKIAMIEMARRLKEEKLQATML 380 Query: 878 MQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 +QVHDELVFEV + +++ + + + ++ME+ L VPL+ + G+ W +A Sbjct: 381 LQVHDELVFEVPESELEQLNQLVKEVMEHAVSLHVPLITDSSWGKTWYEA 430 >UniRef50_B2TNM6 DNA polymerase I n=7 Tax=Clostridiales RepID=B2TNM6_CLOBB Length = 871 Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust. Identities = 219/540 (40%), Positives = 331/540 (61%), Gaps = 40/540 (7%) Query: 397 SRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRH 456 +RE+AL LL+ +ED+ KV + K L Y I+++G FDT + +Y+++S + Sbjct: 362 NREKALNLLRTFMEDKTVKKVIHDSKNLITFLNKYDIDIQGFDFDTAIAAYLIDSSKANY 421 Query: 457 DMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHL-KMWPD 515 ++ L R+L E+ + +D +L K++ Sbjct: 422 EVFDLINRFL-------------------------EKDIKSDCDDLKAICSSYLTKLYEK 456 Query: 516 LQK--HKGPLN-VFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAE----LEK 568 L++ HK ++ ++ +E PL+ VLS +E G KI+ L EEL ++ E EK Sbjct: 457 LKERLHKEDMDELYYKVEHPLIYVLSSMESIGFKINKDKL----EELRIKFKEQIEKTEK 512 Query: 569 KAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVIL 628 + +E+A EEFN+SS KQL ILFEK + +KKT G ST++EVLE+L +P+ ++ Sbjct: 513 EIYELADEEFNVSSPKQLGKILFEKLDLPVIKKTKTGY-STNQEVLEKLIDKHPIITKVM 571 Query: 629 EYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRR 688 YR + K+ STY + L +I+ G +H++++Q VT TGRLSST+PNLQNIP++ E G+ Sbjct: 572 YYRQITKINSTYVEGLKNVIDI-DGCIHSNFNQTVTTTGRLSSTEPNLQNIPIKYEMGKE 630 Query: 689 IRQAFIAPE-DYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLE 747 IR+ FI + D +++S DYSQIELR++AH++ DK ++ AF DIH TA+EVF +P++ Sbjct: 631 IRKVFIPQDSDDILISCDYSQIELRVLAHVADDKNMIDAFEHHSDIHTKTASEVFKVPVD 690 Query: 748 TVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRA 807 VTS R +AKA+NFG++YG+S F LA+ L I +KEA +YM +YFERYP + EY+ Sbjct: 691 EVTSTMRSNAKAVNFGIVYGISDFSLAQDLKITKKEAAEYMAIYFERYPKIKEYLNYVSE 750 Query: 808 QAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWL 867 AKE+GYV T+ RR ++P+IKSSN +A ER A+NAP+QG+AADIIK AM+ V L Sbjct: 751 YAKEKGYVLTILNRRRFIPEIKSSNKIVKALGERLAMNAPIQGSAADIIKLAMVNVYNKL 810 Query: 868 QAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 + + +I+QVHDEL+ V KD+ D V + + + ME +L+V L V++ G W A Sbjct: 811 REKNLNSELILQVHDELILNVKKDEFDIVKQLVIEEMEKAIKLNVALDVDLKYGYTWYDA 870 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 99/262 (37%), Positives = 146/262 (55%), Gaps = 10/262 (3%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 L+++D +S + RA++A PPLTN G T A+YG NML + + P + FD K T Sbjct: 4 LLILDSNSLMNRAFYALPPLTNDDGVNTNAIYGFTNMLFKMKDEINPDNIIATFDKKSPT 63 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR + + YK+ R MP +L Q + ++K MG+ + G EADD+IGT+++ E+ Sbjct: 64 FRHKEYSEYKAGRKKMPPELGEQFPIIKELLKYMGIKTFEIDGFEADDIIGTISKFGEEN 123 Query: 129 GRPVLISTGDKDMAQLVTPNITLINT---MTNT-ILGPEEVVNKYGVPPELIIDFLALMG 184 V I TGDKD QL + ++ T +T T I + ++++ + P ID LMG Sbjct: 124 DMEVYIVTGDKDALQLASEKTKVVITKKGVTETAIYDYKAFMDEFEITPTQFIDVKGLMG 183 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 D SDNIPGVPGVGEKTA L++ G L+ + +I+G K + LE N E A Sbjct: 184 DKSDNIPGVPGVGEKTAFKLIKEYGTLEDVLKHIPEISG------KKLKENLENNMEQAI 237 Query: 245 LSYQLATIKTDVELELTCEQLE 266 S +LATI +V L++ +E Sbjct: 238 FSKKLATIMREVPLDINLSDIE 259 >UniRef50_Q1II21 DNA polymerase I n=2 Tax=Acidobacteria RepID=Q1II21_ACIBL Length = 929 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 221/495 (44%), Positives = 309/495 (62%), Gaps = 27/495 (5%) Query: 432 GIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIAL 491 G+ L + DTML Y+L+ + + + R L K +AG L Sbjct: 456 GLPLESVEHDTMLYEYLLDPTYTTYRLPDVVLRRLNLK------LAG-----------TL 498 Query: 492 EEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKV 551 EA AD+T +L K+ L + G + V+E+I+ PLV VL +E GVK+D V Sbjct: 499 PEA-------ADMTHRLTTKLH-KLVEDGGLMKVYEDIDRPLVTVLYAMEAAGVKLDCDV 550 Query: 552 LHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGI-KPLKKTPGGAPSTS 610 L S L L +K + ++G+EFN++S KQL +LF K + KP+K G ST+ Sbjct: 551 LAEMSTRLQRDADALARKIYGLSGQEFNINSPKQLGDVLFNKLNLPKPVKYGKGKTISTA 610 Query: 611 EEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLS 670 +VLE LA ++ +PK++LEYR KLKSTY D LP + + TGR+HT++ QA T+TGRLS Sbjct: 611 VDVLEGLAGEHEVPKLVLEYRQFTKLKSTYVDALPNLCHAGTGRLHTTFAQAATSTGRLS 670 Query: 671 STDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEG 730 S +PNLQNIP+R E GR IR AF+A + V+++ADYSQIELR++AH S+D+ L+ A+ Sbjct: 671 SVNPNLQNIPIRTELGREIRAAFVAEKGNVLLAADYSQIELRLLAHFSQDRLLVDAYNND 730 Query: 731 KDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDL 790 +DIH TA+EVFG+P + +E RR AKA+NFG++YG+S FGL++QL I KE+++Y++ Sbjct: 731 RDIHALTASEVFGVPPMMIDAEHRRRAKAVNFGIVYGISPFGLSQQLGIDTKESKRYIES 790 Query: 791 YFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQG 850 YFERY GV E++ Q ++ V TL GR +PDI S N R AER A N P+QG Sbjct: 791 YFERYSGVREWLNSVLEQVRKDEKVSTLFGRIRPIPDIHSRNPNLRGFAERTATNTPLQG 850 Query: 851 TAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENC-TR 909 TAAD+IK AMI + L + + RM++QVHDELVFEV + +V+ V + MEN Sbjct: 851 TAADLIKLAMIRIHRDLIERKLKTRMLLQVHDELVFEVPQAEVEEVRALVQDRMENVHPE 910 Query: 910 LDVPLLVEVGSGENW 924 L VPL V+VG G+NW Sbjct: 911 LTVPLKVDVGVGKNW 925 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 107/304 (35%), Positives = 160/304 (52%), Gaps = 38/304 (12%) Query: 9 LILVDGSSYLYRAYHAFP---PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 + L+D +++RAYHA P++ G PT A Y +NML L + P H A + + Sbjct: 35 VFLIDTFGFVFRAYHAMARQRPMSTKTGIPTSATYVFVNMLNKLRQDFAPEHIAAIMEG- 93 Query: 66 GKTFRDE---------------------LFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGL 104 GKTFRDE + YK++R MP+DL Q+ + + A + Sbjct: 94 GKTFRDEEAAAVATINKFDIKTQTFQEIAYGGYKANRTEMPEDLTQQMPYIERALNAYRI 153 Query: 105 PLLAVSGVEADDVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLIN-TMTNTILGPE 163 P+++ G EADDVIGTLA++A G PV I + DKDM QLVT + ++N N I P+ Sbjct: 154 PMISAEGFEADDVIGTLAKKAADGGYPVYIVSSDKDMMQLVTERVCILNPPKDNLICDPK 213 Query: 164 EVVNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAG 223 +V GVPPE ++D +AL GDS DN+PG PG+G+K + L+Q G ++ A Sbjct: 214 KVEEILGVPPERVVDVMALRGDSIDNVPGAPGIGDKGSVQLIQRFGTVE---------AA 264 Query: 224 LSFRG---AKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFK 280 L G +K L+QN++ S ++ TI+TD+++ + + Q P E LF Sbjct: 265 LDHAGEVESKRQRESLQQNRDAVLFSKRMVTIRTDIDMPFEPQAMRAQDPDYEACKALFA 324 Query: 281 KYEF 284 + EF Sbjct: 325 ELEF 328 >UniRef50_C4GAN0 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GAN0_9FIRM Length = 910 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 217/510 (42%), Positives = 324/510 (63%), Gaps = 6/510 (1%) Query: 418 GQNLKYD--RGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEE 475 G+NL + + L+ RG +FD + +Y+L+ ++ + + +A L ++ E Sbjct: 400 GKNLAFLDLKEALSQLSFSDRGRSFDLQVAAYLLDPLSSSYPTEDIARDQLALSIPSYSE 459 Query: 476 IAGKGK-NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLV 534 GK K +Q+ + +E YA A V + K+ L++ +G ++E +E+PLV Sbjct: 460 FFGKKKADQIWEDPEEVEHRMHYACYQAYVASRAPQKLLKRLEE-QGMRALYEEVELPLV 518 Query: 535 PVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQ 594 L +E G+ ++ + L ++ ++L R+ ELE+ + AGE FN++S KQL +LF + Sbjct: 519 YTLYDMETAGIAVEKEALKSYGDQLVGRINELEEGIYREAGETFNINSPKQLGEVLFGQL 578 Query: 595 GIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGR 654 G+ +KT G ST+ +VL+ LA++Y + + +LE+R L KLKSTY D L +I GR Sbjct: 579 GLPGARKTKTGY-STAADVLDPLAVNYQIVRDVLEFRQLTKLKSTYADGLAKVI-ADDGR 636 Query: 655 VHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIM 714 +H+S+ Q VTATGRLSST+PNLQNIP+R E G+ IR+ F A E V V +DYSQIELR++ Sbjct: 637 IHSSFQQTVTATGRLSSTEPNLQNIPIRMELGKEIRRVFPAMEGCVFVDSDYSQIELRVL 696 Query: 715 AHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLA 774 AHLS+D L+ A+ +GKDIHRATA+ VF P E VT +QR +AKA+NFG++YG+SAFGLA Sbjct: 697 AHLSQDPKLIEAYRQGKDIHRATASLVFHTPFEEVTDQQRSNAKAVNFGIVYGISAFGLA 756 Query: 775 RQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGA 834 + L I R+EAQ+Y+D YF YP + +Y++ A+++GY TL GRR +P++K+SN Sbjct: 757 KDLGISREEAQEYIDGYFAAYPRLHDYLDGLVEFARKEGYAVTLFGRRRPVPELKNSNFM 816 Query: 835 RRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVD 894 +R ER A+NAP+QGTAADIIK AM+ V L E R R+I+ VHDEL+ E + + Sbjct: 817 QRQFGERVAMNAPVQGTAADIIKIAMVRVHDRLAKEGLRSRLILTVHDELLVETFEQEEQ 876 Query: 895 AVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 V + + Q M +L V L ++ SG NW Sbjct: 877 EVREILDQEMRGAAQLSVELEIDTHSGRNW 906 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 104/287 (36%), Positives = 156/287 (54%), Gaps = 14/287 (4%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 Q+ L+L+DG S L RA++ P LTNS G+ T A+YG LN+L + + KP H V FD Sbjct: 4 QSKLLLIDGHSILNRAFYGLPDLTNSKGQHTNAVYGFLNILFKTMEEEKPDHLTVAFDLS 63 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 TFR +F YK R PM +LR Q+ + M+ AMG+ L+ G+EADD++GT+++ Sbjct: 64 APTFRHRMFADYKGTRKPMAAELREQVPMIKEMLAAMGICLVTKEGLEADDLLGTMSKIG 123 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLI-------NTMTNTILGPEEVVNKYGVPPELIID 178 E AG V I +GD+D+ QL T + ++ T T + ++V Y V P ID Sbjct: 124 EAAGMDVTILSGDRDLLQLATDKVKIMIPKTKKGGTETESYYA-KDVRETYQVSPTEFID 182 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 AL GD++DNIPGVPG+GEKTA ++ G ++ + E + R A+ + +Q Sbjct: 183 VKALWGDTADNIPGVPGIGEKTAINIIAAYGSIEAAHEHAEDLK--PPRAARNIVDFWDQ 240 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFK 285 A LS LATI +++ ++ ++ L K + FK Sbjct: 241 ----ARLSKTLATIDVHAKIDYDLAAAQIGNIFTDDAYRLCKDWGFK 283 >UniRef50_Q2JCJ5 DNA polymerase I n=10 Tax=Actinomycetales RepID=Q2JCJ5_FRASC Length = 945 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 223/526 (42%), Positives = 316/526 (60%), Gaps = 10/526 (1%) Query: 405 LKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAER 464 L L D K ++K L + L G+ DT L +Y+ D+ L R Sbjct: 425 LGAWLADPNQPKAAHDVKGPMLALTELDLPLAGVTSDTALAAYLALPGQRSFDLADLVAR 484 Query: 465 WLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLN 524 +L H+ ++ + + G QLT + + A A L+L + DL++ + Sbjct: 485 YL-HRDLSADPV--PGGQQLTLDGSGEADQAHADAVRARACLELADALDADLER-RSAAT 540 Query: 525 VFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTK 584 + +IE+PLV VL+ +ER G+ +D + L + ++ + +AHEI G FNL S K Sbjct: 541 LLRDIELPLVTVLAGMERAGIAVDSEHLTELQKHYGGEVSAVAAQAHEIVGRPFNLGSPK 600 Query: 585 QLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELAL--DYPLPKVILEYRGLAKLKSTYTD 642 QLQ ILF++ G+ KK G +T + L LA+ D+PL V+L +R +A+LK T D Sbjct: 601 QLQQILFDELGLPKTKKIKTGY-TTDADALAWLAVQSDHPLLPVLLRHRDVARLK-TVVD 658 Query: 643 KLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY-VI 701 L MI+ GR+HT+++Q + ATGRLSS DPNLQNIP+R EGR+IR+AF+ Y + Sbjct: 659 SLIPMID-DIGRIHTTFNQTIAATGRLSSADPNLQNIPIRTAEGRQIRRAFVVGAGYETL 717 Query: 702 VSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAIN 761 ++ADYSQIE+RIMAHLS D+GL+ AF G+D+H AAE FGLP+ V E RR KA++ Sbjct: 718 LTADYSQIEMRIMAHLSGDEGLIEAFGSGEDLHTFVAAEAFGLPVSEVDPELRRRIKAMS 777 Query: 762 FGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGR 821 +GL YG+SAFGLA QL I EA+++MD YF R+ GV +++ +A++ GY ET+ GR Sbjct: 778 YGLAYGLSAFGLAGQLGIAPDEAREHMDAYFARFGGVRDFLRGVVERARKDGYTETILGR 837 Query: 822 RLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVH 881 R YLPD+ S N RR AER A+NAP+QG+AADIIK AM+ VD L A R+++QVH Sbjct: 838 RRYLPDLTSDNSQRRQMAERMALNAPIQGSAADIIKIAMLGVDRALCAGGYASRLLLQVH 897 Query: 882 DELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 DELV E+ + DAV + + M + + VPL V VG+G WD A Sbjct: 898 DELVLEIAPGEHDAVERLVRAEMTSAYTMSVPLDVSVGAGCTWDDA 943 >UniRef50_Q9ZJE9 DNA polymerase I n=17 Tax=Helicobacter RepID=DPO1_HELPJ Length = 897 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 302/947 (31%), Positives = 480/947 (50%), Gaps = 82/947 (8%) Query: 4 IPQNPLILVDGSSYLYRAYHAF---PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 I + L L+D +YL+R+Y+ PLTN G PTG + G++ M++ K + Sbjct: 6 IKEGTLALIDTFAYLFRSYYMSAKNKPLTNDKGFPTGLLTGLVGMVKKFYKDRK-NMPFI 64 Query: 61 VF--DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVI 118 VF +++ KT R E YK +R P ++ QI ++ MG + V G EADDVI Sbjct: 65 VFALESQTKTKRAEKLGEYKQNRKDAPKEMLLQIPIALEWLQKMGFTCVEVGGFEADDVI 124 Query: 119 GTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIID 178 +LA + R I + DKD QL++ I L + T + ++ V KYG+ P D Sbjct: 125 ASLATLSPYKTR---IYSKDKDFNQLLSDKIALFDGKTEFL--AKDCVEKYGILPSQFTD 179 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 + ++GDSSDN GV G+G K A+ LLQ LG L+ +Y + L + M L Q Sbjct: 180 YQGIVGDSSDNYKGVKGIGSKNAKELLQRLGSLEKIYENLDLAKNLL---SPKMYQALIQ 236 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGL---FKKYEFKRWTADVEAGK 295 +K A+LS +LAT++ E + L P+ LL + K+Y F D+E Sbjct: 237 DKGSAFLSKELATLERGCIKEF--DFLSCAFPSENPLLKIKDELKEYGFISTLRDLENSP 294 Query: 296 WLQAKGAKPAAKP--QETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFA 353 ++ + P T D AP+ + ++ + E L ++ KLE Sbjct: 295 FIVENVPILNSTPILDNTPALDNAPKKSRMIV-------LESAEPLSMFLEKLENPNARV 347 Query: 354 FDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLED-- 411 F D ++ L+F ++ ++P+ + L +P +LE L+ Sbjct: 348 FMRLVLDKDK---KILALAFLLQDQ-GYFLPL-EEALFSP------FSLEFLQNAFSQML 396 Query: 412 EKALKVGQNLKYDRGIL-ANYGIELRGIAF-DTMLESYILNSVAGRHDMDSLAERWLKHK 469 + A +G +LK L A Y + L I DT + +++ N + D + + +LK Sbjct: 397 QHACIIGHDLKPLLSFLKAKYQVPLENIRIQDTQILAFLKN--PEKVGFDEVLKEYLKED 454 Query: 470 TITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKH--KGPL---- 523 I E+I + + AE +++ L + L L ++ KG L Sbjct: 455 LIPHEKIK--------------DFKTKSKAEKSEL-LSMELNALKRLCEYFEKGGLEEDL 499 Query: 524 -NVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSS 582 + +IE P V VL +E G KID +E L LE++ ++ G +FNL+S Sbjct: 500 LTLARDIETPFVKVLMGMEFQGFKIDAPYFKRLEQEFKNELNVLERQILDLIGVDFNLNS 559 Query: 583 TKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTD 642 KQL +L++K G+ P K+ ST E+ L ++ +P +ILEYR L KL +TYT Sbjct: 560 PKQLGEVLYDKLGL-PKNKSH----STDEKNLLKILDKHPSIPLILEYRELNKLFNTYTT 614 Query: 643 KLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVI 701 L L + K ++HT++ Q TATGRLSS PNLQNIPVR+ +G IR+ FIA ++Y + Sbjct: 615 PL-LRLKDKDDKIHTTFIQTGTATGRLSSHSPNLQNIPVRSPKGLLIRKGFIASSKEYCL 673 Query: 702 VSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAIN 761 + DYSQIELR++AH S+DK L+ AF +G+DIH T+ +FG E + E+R AK+IN Sbjct: 674 LGVDYSQIELRLLAHFSQDKDLMEAFLKGRDIHLETSKALFG---EDLAKEKRSIAKSIN 730 Query: 762 FGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGR 821 FGL+YGM + L+ L+IP EA+ Y++ YF+R+P + +Y+ R + + TL GR Sbjct: 731 FGLVYGMGSKKLSETLSIPLSEAKSYIEAYFKRFPSIKDYLNGMREEILKTSKAFTLLGR 790 Query: 822 -RLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQV 880 R++ D N + R +NA QG+A+D++K M+ V + P VR+++QV Sbjct: 791 YRVF--DFTGVNDYVKGNYLREGVNAIFQGSASDLLKLGMLKVSERFK-NNPSVRLLLQV 847 Query: 881 HDELVFEVHKDDVDAVAKQIHQLMEN-CTRLDVPLLVEVGSGENWDQ 926 HDEL+FE+ + + + ++I +++ + L VPL + W++ Sbjct: 848 HDELIFEIEEKNAPELQQEIQRILNDEVYPLRVPLETSAFIAKRWNE 894 >UniRef50_P52027 DNA polymerase I n=4 Tax=Deinococci RepID=DPO1_DEIRA Length = 956 Score = 381 bits (978), Expect = e-104, Method: Compositional matrix adjust. Identities = 195/401 (48%), Positives = 269/401 (67%), Gaps = 3/401 (0%) Query: 525 VFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTK 584 +++ +E PL VL R+E GV++D L S + +RLA+LE + HE AGEEF++ S K Sbjct: 554 MYDEMEKPLSGVLGRMEVRGVQVDSDFLQTLSIQAGVRLADLESQIHEYAGEEFHIRSPK 613 Query: 585 QLQTILFEKQGIKPLKKTP-GGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDK 643 QL+T+L++K + KKT G ST+ LE L +P+ ++LE+R L KL+ TY D Sbjct: 614 QLETVLYDKLELASSKKTKLTGQRSTAVSALEPLRDAHPIIPLVLEFRELDKLRGTYLDP 673 Query: 644 LPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVS 703 +P ++NP TGR+HT++ Q ATGRLSS +PNLQNIP+R+E GR IR+ FIA + + +++ Sbjct: 674 IPNLVNPHTGRLHTTFAQTAVATGRLSSLNPNLQNIPIRSELGREIRKGFIAEDGFTLIA 733 Query: 704 ADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFG 763 ADYSQIELR++AH++ D + AF EG DIHR TAA+V GL TV + QRR+AK +NFG Sbjct: 734 ADYSQIELRLLAHIADDPLMQQAFVEGADIHRRTAAQVLGLDEATVDANQRRAAKTVNFG 793 Query: 764 LIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRL 823 ++YGMSA L+ L IP EA ++++YF YPG+ Y+ T + GYVETL GRR Sbjct: 794 VLYGMSAHRLSNDLGIPYAEAATFIEIYFATYPGIRRYINHTLDFGRTHGYVETLYGRRR 853 Query: 824 YLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDE 883 Y+P + S N +R A ER A N P+QGTAADI+K AM+ +D L A RM++QVHDE Sbjct: 854 YVPGLSSRNRVQREAEERLAYNMPIQGTAADIMKLAMVQLDPQLDAIG--ARMLLQVHDE 911 Query: 884 LVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 L+ E D + VA ++MEN +L VPL VEVG+G NW Sbjct: 912 LLIEAPLDKAEQVAALTKKVMENVVQLKVPLAVEVGTGPNW 952 Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 108/258 (41%), Positives = 146/258 (56%), Gaps = 8/258 (3%) Query: 5 PQNP--LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 P P L+L+DG + +R+Y A PPL NS GE T A+ G + +L L Q K VVF Sbjct: 43 PSKPDTLVLIDGHALAFRSYFALPPLNNSKGEMTHAIVGFMKLLLRLARQ-KSNQVIVVF 101 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 D KTFR E +E YKS R P+DL QI + A+V A+G P L G EADDVI +L Sbjct: 102 DPPVKTFRHEQYEGYKSGRAQTPEDLPGQINRIRALVDALGFPRLEEPGYEADDVIASLT 161 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLAL 182 R AE G V I T D+D QL+ ++ +I +++GP +V KYGV +D+ AL Sbjct: 162 RMAEGKGYEVRIVTSDRDAYQLLDEHVKVIAN-DFSLIGPAQVEEKYGVTVRQWVDYRAL 220 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 GD+SDNIPG G+G KTA LLQ G L+ +Y E L G + KL ++E Sbjct: 221 TGDASDNIPGAKGIGPKTAAKLLQEYGTLEKVY-EAAHAGTLKPDGTRK---KLLDSEEN 276 Query: 243 AYLSYQLATIKTDVELEL 260 S+ L+ + TD+ L++ Sbjct: 277 VKFSHDLSCMVTDLPLDI 294 >UniRef50_Q2GI23 DNA polymerase I n=6 Tax=Rickettsiales RepID=Q2GI23_EHRCR Length = 944 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 232/590 (39%), Positives = 330/590 (55%), Gaps = 54/590 (9%) Query: 337 ETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQI 396 E+LK ++ + + AF E DN+ + +S + + + YI H Sbjct: 398 ESLKVFLENCKGEGIMAFYMEM--ADNV---IDSVSLSYKDDILLYIDKDH--------- 443 Query: 397 SRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFD-TMLESYILNSVAGR 455 ALEL+KP+L LKV YD L ++ +AFD M+ SYIL+ Sbjct: 444 -VTDALELIKPVLGLNYVLKV----IYDVKTLLKVIPDVEIVAFDDIMIMSYILSPSVHD 498 Query: 456 HDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPD 515 H + + +K + K +T + QL+ Sbjct: 499 HSLQEIINYNVKQDVVNV-------KTAITLLLLHKLLKKNLFVN------QLY------ 539 Query: 516 LQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAG 575 ++E +E PL+ VL +E+ G+ ID +L S + +++ LE + + +AG Sbjct: 540 --------TIYERVEKPLIRVLDSMEKVGMLIDIDILKTLSSTFSEKVSVLENEIYRLAG 591 Query: 576 EEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALD-YPLPKVILEYRGLA 634 EFN++S+KQL T+LF+K GIK KK G+ ST EVL +L + + IL++R Sbjct: 592 TEFNIASSKQLGTVLFDKMGIKKSKKLSSGSYSTDAEVLNDLVFNEIEIADKILQWRHFT 651 Query: 635 KLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFI 694 KLKSTYTD L IN +GR+HT Y TATGRLSS++PNLQNIP+R+EEG IR+AF+ Sbjct: 652 KLKSTYTDALGKQINSNSGRIHTFYSMISTATGRLSSSNPNLQNIPIRSEEGNAIRRAFV 711 Query: 695 APEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQR 754 A + Y +VSADYSQIELRIMAH++ + AF +DIH TA ++F +++ R Sbjct: 712 ARKGYKLVSADYSQIELRIMAHIAGVQAFKDAFFLDQDIHSITAEQIF--CTQSLDKNLR 769 Query: 755 RSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGY 814 R AK+INFG+IYGMSAFGLA+QL I R EA Y+D YF+ YP + YM + AK GY Sbjct: 770 RKAKSINFGIIYGMSAFGLAKQLGISRSEANAYIDNYFKSYPEIQSYMNNIKIYAKTYGY 829 Query: 815 VETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRV 874 T+ GR+ ++ DI SSN A R +ERAAINAP+QGT+ADIIK +MI L + Sbjct: 830 TRTIFGRKCFIRDINSSNAAARNFSERAAINAPLQGTSADIIKMSMI----HLFDKITHG 885 Query: 875 RMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 +I+QVHDEL+FE+ ++ VD + I ++ME +L VPL V++ G NW Sbjct: 886 SLILQVHDELLFEILEEYVDYAVEVITKVMEGIVKLSVPLKVDIRIGTNW 935 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 110/308 (35%), Positives = 163/308 (52%), Gaps = 10/308 (3%) Query: 11 LVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKTFR 70 ++D L+RAY+A P L S G P G +YG +N+ I ++ + VVFD K FR Sbjct: 6 IIDAYGLLFRAYYALPNLRTSYGLPIGGVYGFINIFLKYIEKHVTDYLVVVFDTGSKNFR 65 Query: 71 DELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK-AG 129 ++ YK +RP +PDDL Q L V A + V G EADDVI TL+++ K G Sbjct: 66 HNIYPEYKGNRPKLPDDLIPQFSLLREAVNAFNIASEEVVGYEADDVIATLSKKYCKLQG 125 Query: 130 RPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSDN 189 V + T DKD+ QL+ NI + + + N + E+V +K+G+ ++DFL+L GD+SDN Sbjct: 126 VKVTVVTSDKDLLQLLKYNICIFDPIKNKYIEEEDVQSKFGISSNQLLDFLSLTGDASDN 185 Query: 190 IPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQL 249 +PG+PG+G KTA LL G LD L ++ R + T Q + A LS QL Sbjct: 186 VPGIPGIGVKTAAKLLNDFGSLDNLLLHVHEVKTNKCRESIT------QYSDQAILSRQL 239 Query: 250 ATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAKPQ 309 T+ +V++ E+ Q +EL+ KKYE + V+ K+ + A A Q Sbjct: 240 VTLCDEVDICGDIEKYSFQISGIQELVEFLKKYELQSLMNKVD--KFFKVGNASSAVN-Q 296 Query: 310 ETSVADEA 317 TS +D+ Sbjct: 297 NTSSSDKT 304 >UniRef50_B6WQX5 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WQX5_9DELT Length = 919 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 208/497 (41%), Positives = 305/497 (61%), Gaps = 30/497 (6%) Query: 439 AFDTMLESYILNSVAGRHDMDSLAERW---LKHKTITFEEIAGKGKNQLTFNQIALEEAG 495 D + +Y+LN + L+ RW L+H+ LE G Sbjct: 446 CIDLGVAAYLLNPEENDYGWPRLSARWGAVLRHE---------------------LESRG 484 Query: 496 RYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNH 555 A+ A + L + +++ + G L +F +EMPL+PVL+ +E++GV ID Sbjct: 485 ETASGPARLGLAMA-QLFEQRMEKDGLLELFRRLEMPLLPVLAGMEQSGVAIDAAAFRAF 543 Query: 556 SEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLE 615 +++ +L +L +E+AG +FN+ S +QL +LF G+ +KT GG STS++ LE Sbjct: 544 LDDVQGQLDQLTAHVYELAGTQFNIRSAQQLGDVLFNGLGLPAPRKTKGGQASTSQQTLE 603 Query: 616 ELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPN 675 +LA +P+ IL+YR L K++STY D LP +++P+ GR+HT+++Q TATGRLSS++PN Sbjct: 604 KLAGQHPVVDSILQYRKLEKMRSTYLDPLPRLVDPQ-GRIHTTFNQKATATGRLSSSNPN 662 Query: 676 LQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHR 735 LQNIPVR G+R+R FIA ++VSADYSQ+ELR++AH+S+D LL AF G+DIH Sbjct: 663 LQNIPVRGPLGKRMRSCFIAGPGRLLVSADYSQVELRVLAHVSQDPALLEAFRNGEDIHA 722 Query: 736 ATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERY 795 TAA V+ LP + V+ +QRR+AK INFGLIYGM A LA++L I +A+ ++ YFER Sbjct: 723 RTAALVYDLPPDQVSPDQRRNAKTINFGLIYGMGAQKLAQELKISTTQAKDFIARYFERL 782 Query: 796 PGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADI 855 G+ E+ E A A++ G+V TL GRR LPDI S++G A A R AIN +QG+AADI Sbjct: 783 QGLKEFYEGVEASARKHGFVTTLGGRRRLLPDINSASGQAAALARRQAINTVIQGSAADI 842 Query: 856 IKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCT----RLD 911 IK AM+AV + + R+++QVHDEL+ EV D + + +LM++ L Sbjct: 843 IKLAMLAVARDERLRELDARLLLQVHDELLLEVPADAAEEAGALVARLMQDVCPAGKELS 902 Query: 912 VPLLVEVGSGENWDQAH 928 VPLLV+ G+G +W AH Sbjct: 903 VPLLVDWGTGHDWGAAH 919 Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 97/284 (34%), Positives = 153/284 (53%), Gaps = 20/284 (7%) Query: 8 PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 P+ L+DGS+++YR + A + S G PT ++ V +L ++ + +P + A V D KG Sbjct: 13 PVFLMDGSAFIYRGFFANRNMQRSDGFPTNSLVVVSRVLLRILREERPRYFAFVQDGKGP 72 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 FR E+F YK++R P+DL Q++P+ MV+A+GL L G EADD I +LA A Sbjct: 73 NFRHEIFPLYKANRDATPEDLVRQLDPIQRMVRALGLRLEVSQGCEADDCIASLA--ARF 130 Query: 128 AG-RPVLISTGDKDMAQLVTPNITLINTMTN--TILGPEEVVNKYGVPPELIIDFLALMG 184 AG PV+I +GDKD+ Q + PN+ + + + ++ + + GV P D AL+G Sbjct: 131 AGEHPVIIVSGDKDLKQCLGPNVYMWDPASKEEKLVSEADFTAESGVTPGQWPDVQALIG 190 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGL----DTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 D+SDNIPGVPG+G KTA+ + L D P K + AKL+++ Sbjct: 191 DTSDNIPGVPGIGPKTARQIFSICPSLEDIRDHFVLLPPK-----------LQAKLQEHL 239 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEF 284 E ++ QL T+ + +T + L V+ A L +++E Sbjct: 240 ENMFIWRQLTTLSREACPGVTLDDLRVRPLDAATCALLTEEFEL 283 >UniRef50_B8IZN9 DNA polymerase I n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8IZN9_DESDA Length = 921 Score = 366 bits (940), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 192/415 (46%), Positives = 267/415 (64%), Gaps = 5/415 (1%) Query: 518 KHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEE 577 + G ++E++E+PL P+L+ +ER G+ ID + ++ RL L +E AG E Sbjct: 508 RQDGLAELYESLELPLTPILADMERRGIAIDAAAFESFLSDVQGRLDTLTAAVYEAAGRE 567 Query: 578 FNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLK 637 FN+ S +QL +LF + +KT GG STS++ LE+LA +P+ +LE+R L K++ Sbjct: 568 FNIRSAQQLGDVLFSTLELPSPRKTKGGQASTSQDTLEKLAGRHPVVDSVLEFRKLEKMR 627 Query: 638 STYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE 697 STY D LP +++ GR+HT+++Q TATGRLSS++PNLQNIPVR + G+R+R FIA Sbjct: 628 STYLDPLPRLMD-GNGRIHTTFNQKATATGRLSSSNPNLQNIPVRGDLGKRMRTCFIANP 686 Query: 698 DYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSA 757 +VSADYSQ+ELR++AH+S+DK LL AF G+DIH TAA V+ L + V+ +QRR+A Sbjct: 687 GSALVSADYSQVELRVLAHMSQDKALLEAFRNGEDIHARTAALVYDLAPDQVSPDQRRNA 746 Query: 758 KAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVET 817 K INFGLIYGM A L + L I EA++++ YF R G+ E+ + A AK QGYV T Sbjct: 747 KTINFGLIYGMGAQKLGQDLKISTSEAKEFIARYFSRLTGLKEFYDSVEATAKRQGYVTT 806 Query: 818 LDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMI 877 L GRR LPDI S NG A A R AIN +QG+AADIIK AM+AV Q + R++ Sbjct: 807 LGGRRRLLPDIHSPNGQAYALARRQAINTVIQGSAADIIKLAMLAVAEDEQLREHEARLL 866 Query: 878 MQVHDELVFEVHKDDVDAVAKQIHQLMENCT----RLDVPLLVEVGSGENWDQAH 928 +QVHDEL+ EV + A ++ LM + L VPL+V+ G G+NW AH Sbjct: 867 LQVHDELLLEVPEASARAAGARVADLMSSVKPGGEPLSVPLVVDWGVGKNWGAAH 921 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 76/201 (37%), Positives = 117/201 (58%), Gaps = 3/201 (1%) Query: 8 PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 P+ L+DGS+++YR + A + S G PT A+ V +L ++ + +P + V D KGK Sbjct: 13 PVFLMDGSAFIYRGFFANRNMQRSDGFPTNALVVVTRVLLRILREERPQYFLFVKDGKGK 72 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 FR ++F YK++R P+DL Q++P+ MV A+G+ L EADD I +LA + Sbjct: 73 NFRHDIFPLYKANRDATPEDLVRQMQPIERMVTALGMNLEVSDHCEADDCIASLAARFSQ 132 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTM--TNTILGPEEVVNKYGVPPELIIDFLALMGD 185 RPV+I GDKD+ Q + PN+ + + +L + + G+ P D AL+GD Sbjct: 133 E-RPVVIVGGDKDLKQCLGPNVYMWDPAFRDEKLLTAAQFTEESGLTPAQWPDVQALVGD 191 Query: 186 SSDNIPGVPGVGEKTAQALLQ 206 +SDNIPGVPG+G KTA + + Sbjct: 192 TSDNIPGVPGIGPKTAAKIFE 212 >UniRef50_P52028 DNA polymerase I, thermostable n=18 Tax=Bacteria RepID=DPO1T_THET8 Length = 834 Score = 362 bits (930), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 196/431 (45%), Positives = 284/431 (65%), Gaps = 3/431 (0%) Query: 498 AAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSE 557 AA A ++ +LH + L+ + L ++ +E PL VL+ +E GV++D L S Sbjct: 404 AAHRALLSERLHRNLLKRLEGEEKLLWLYHEVEKPLSRVLAHMEATGVRLDVAYLQALSL 463 Query: 558 ELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT-PGGAPSTSEEVLEE 616 EL + LE++ +AG FNL+S QL+ +LF++ + L KT G STS VLE Sbjct: 464 ELAEEIRRLEEEVFRLAGHPFNLNSRDQLERVLFDELRLPALGKTQKTGKRSTSAAVLEA 523 Query: 617 LALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNL 676 L +P+ + IL++R L KLK+TY D LP +++P+TGR+HT ++Q TATGRLSS+DPNL Sbjct: 524 LREAHPIVEKILQHRELTKLKNTYVDPLPSLVHPRTGRLHTRFNQTATATGRLSSSDPNL 583 Query: 677 QNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRA 736 QNIPVR G+RIR+AF+A + +V+ DYSQIELR++AHLS D+ L+ F EGKDIH Sbjct: 584 QNIPVRTPLGQRIRRAFVAEAGWALVALDYSQIELRVLAHLSGDENLIRVFQEGKDIHTQ 643 Query: 737 TAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYP 796 TA+ +FG+P E V RR+AK +NFG++YGMSA L+++L IP +EA +++ YF+ +P Sbjct: 644 TASWMFGVPPEAVDPLMRRAAKTVNFGVLYGMSAHRLSQELAIPYEEAVAFIERYFQSFP 703 Query: 797 GVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADII 856 V ++E+T + +++GYVETL GRR Y+PD+ + + R AAER A N P+QGTAAD++ Sbjct: 704 KVRAWIEKTLEEGRKRGYVETLFGRRRYVPDLNARVKSVREAAERMAFNMPVQGTAADLM 763 Query: 857 KRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLV 916 K AM+ + L+ + RM++QVHDEL+ E + + VA + ME L VPL V Sbjct: 764 KLAMVKLFPRLR--EMGARMLLQVHDELLLEAPQARAEEVAALAKEAMEKAYPLAVPLEV 821 Query: 917 EVGSGENWDQA 927 EVG GE+W A Sbjct: 822 EVGMGEDWLSA 832 Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 106/280 (37%), Positives = 158/280 (56%), Gaps = 9/280 (3%) Query: 5 PQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 P+ ++LVDG YR + A LT S GEP A+YG L + + VVFDA Sbjct: 10 PKGRVLLVDGHHLAYRTFFALKGLTTSRGEPVQAVYGFAKSLLKALKEDGYKAVFVVFDA 69 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 K +FR E +E YK+ R P P+D Q+ + +V +G L V G EADDV+ TLA++ Sbjct: 70 KAPSFRHEAYEAYKAGRAPTPEDFPRQLALIKELVDLLGFTRLEVPGYEADDVLATLAKK 129 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMG 184 AEK G V I T D+D+ QLV+ + +++ ++ PE + KYG+ PE +DF AL+G Sbjct: 130 AEKEGYEVRILTADRDLYQLVSDRVAVLHP-EGHLITPEWLWEKYGLRPEQWVDFRALVG 188 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 D SDN+PGV G+GEKTA LL+ G L+ L +++ + R K++ + E Sbjct: 189 DPSDNLPGVKGIGEKTALKLLKEWGSLENLLKNLDRVKPENVR------EKIKAHLEDLR 242 Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEF 284 LS +L+ ++TD+ LE+ Q ++P E L ++ EF Sbjct: 243 LSLELSRVRTDLPLEVDLAQ--GREPDREGLRAFLERLEF 280 >UniRef50_D0YSZ1 DNA polymerase I n=6 Tax=Actinobacteridae RepID=D0YSZ1_9ACTO Length = 1040 Score = 354 bits (909), Expect = 9e-96, Method: Compositional matrix adjust. Identities = 222/561 (39%), Positives = 309/561 (55%), Gaps = 35/561 (6%) Query: 398 RERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHD 457 R + +L+ E V N K R L YG EL G D L Y+ + A R Sbjct: 482 RPESENVLRDFFAAENRTVVVYNAKALRHALRAYGWELSGTVRDVNLLDYLADPDASRLK 541 Query: 458 MDSLAERWLKHKTITFEEIAGKGKNQLTFN--------------------------QIAL 491 ++ ER L GK Q+ F+ I L Sbjct: 542 FAAVTERLLGWSIDEKPSDIGKISEQMAFDLGWGNVTDAAGAAAVAASTGSKDISGGIPL 601 Query: 492 EEAGRYAAEDADVTLQLHLKMWPDL--QKHKGPLNVFENIEMPLVPVLSRIERNGVKIDP 549 A L L L M P L Q + ++E+PL +L R+E G+ +D Sbjct: 602 PSLPETLVNQAKYALSL-LDMLPILTEQVEYRRVGSLLDMELPLSRLLERMEDTGIAVDE 660 Query: 550 KVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPST 609 +L +EL+ + E A E G E NLSS KQLQ +LF + G+ P +KT G +T Sbjct: 661 GLLQRFDQELSSEVKRTEAAAFEAIGREVNLSSPKQLQDVLFNQLGLPPTRKTKTGY-TT 719 Query: 610 SEEVLEELALDYPLP--KVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATG 667 + LEELAL P P + +L +R +KL + + + GR+HT++ Q V ATG Sbjct: 720 DAKALEELALYNPHPFLQALLYFRDRSKLLQVVRNLGDRIAS--DGRIHTTFGQTVAATG 777 Query: 668 RLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYV-IVSADYSQIELRIMAHLSRDKGLLTA 726 RLSS DPNLQNIP R ++G RIR+ FIA +V +++ADYSQIE+RIMAHLS D+GL+ A Sbjct: 778 RLSSLDPNLQNIPARTDDGARIRETFIAQMPFVSLMTADYSQIEMRIMAHLSGDEGLIAA 837 Query: 727 FAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQK 786 F G+D+HR+ AA VFG+ E VT+ QR KA ++GL YG+SAFGLA QL I + EA+ Sbjct: 838 FKSGEDLHRSVAALVFGVAPEAVTATQRTHVKATSYGLAYGLSAFGLAGQLRISQGEAKH 897 Query: 787 YMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINA 846 M+ YF R+ V +Y+E ++A+ GY ET+ GRR YLP ++++N A RAA+NA Sbjct: 898 LMETYFSRFGAVRDYLEHIVSEARRVGYTETMWGRRRYLPGLRATNRVVAENARRAALNA 957 Query: 847 PMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMEN 906 P+QG+AAD++K+AM+ VDA + A R+++Q+HDELVFEV +VDA+ + + + M + Sbjct: 958 PIQGSAADLMKQAMLRVDAAMAAAGLGSRILLQIHDELVFEVAPGEVDALRRVVTEAMTS 1017 Query: 907 CTRLDVPLLVEVGSGENWDQA 927 L VPL V VG G NW A Sbjct: 1018 VVELRVPLEVSVGVGANWRAA 1038 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 90/283 (31%), Positives = 154/283 (54%), Gaps = 13/283 (4%) Query: 9 LILVDGSSYLYRAYHAFPP--LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L+++DG S +RA+++ PP + G T A++G ++ML +++ + KPTH FD Sbjct: 6 LLVLDGHSLAFRAFYSRPPENFRTTTGVYTNAVHGFMSMLLAMLRREKPTHIGAAFDLSR 65 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 +FR +++ YK R P + QIE + ++ A+G+ L + VEADD++ TLA + + Sbjct: 66 HSFRTDIYPDYKGGRAETPPEFLGQIENIQRLLDALGIKWLTMENVEADDILATLATQGK 125 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLI----NTMTNTILGPEEVVNKYGVPPELIIDFLAL 182 G VL+S+GD+D QL+ + T++ N T + P+ V +KYGV P + AL Sbjct: 126 AQGMQVLVSSGDRDTFQLIDESTTVLYPGHNAAQTTRMTPQAVKDKYGVWPAQYPEVAAL 185 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 +G+ +DN+PGVP VGEK+A A + GGL+ + A ++ G + + +N+E Sbjct: 186 VGEKADNLPGVPLVGEKSAAAWINQYGGLEGILAHRGELKGKRGENLRAHVDDVLRNRE- 244 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFK 285 L ++TD+ L L + L + + + + EFK Sbjct: 245 ------LNRLRTDLHLPLQLDDLRWRGMDVSAVDAVCAELEFK 281 >UniRef50_C6C0R6 DNA polymerase I n=3 Tax=Desulfovibrio RepID=C6C0R6_DESAD Length = 904 Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 181/401 (45%), Positives = 267/401 (66%), Gaps = 1/401 (0%) Query: 528 NIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQ 587 N+E+PL+PVL+ +E+ G+ ID + E+ R+ EL + HE AGE FN+ S++Q+ Sbjct: 505 NLEIPLIPVLADMEKAGITIDLDAFADFLTEVNERINELTRVIHERAGEPFNIRSSQQMA 564 Query: 588 TILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLM 647 T+LF+ G+KP KTP GA ST+ VLE+L+ + + ILEYR + KL+STY + LP + Sbjct: 565 TVLFDSLGLKPGGKTPKGALSTANSVLEKLSGQHEIITDILEYRKMEKLRSTYLEPLPKL 624 Query: 648 INPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYS 707 +N GR+HT+++Q TATGRLSS+ PNLQNIP+R ++G+R+R F A E + +ADYS Sbjct: 625 VNA-NGRIHTNFNQLATATGRLSSSGPNLQNIPIRGDQGKRMRACFTAGEGLRLAAADYS 683 Query: 708 QIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYG 767 Q+ELR++AH S D L++AF +DIH TAA +F VTS++RR+AK INFGLIYG Sbjct: 684 QVELRVLAHFSGDPALVSAFEHDEDIHSRTAALLFDRDPADVTSDERRNAKTINFGLIYG 743 Query: 768 MSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPD 827 M L+R+L I EA++++ YFE+ + E+ + Q +E+GYV TL GRR LP+ Sbjct: 744 MGPQKLSRELGIKINEAKEFIAKYFEKLDVLKEFYDSVVEQGREKGYVTTLSGRRRLLPE 803 Query: 828 IKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFE 887 + S++ + A R AIN +QG+AADIIK AMI V + + R+I+Q+HDEL+ E Sbjct: 804 LHSTSPQILSQARRQAINTVIQGSAADIIKMAMIKVADNAEIKHLGGRLILQIHDELLVE 863 Query: 888 VHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 +++++ + K + + M+ L VPL V++G G NW QAH Sbjct: 864 GPEENIEEIGKLLQKDMQTVATLAVPLKVDLGLGRNWAQAH 904 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 109/318 (34%), Positives = 168/318 (52%), Gaps = 16/318 (5%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 +PL L+DGS++ YR +HA+P L S G PT AM+ VL L +I + KP + + D KG Sbjct: 12 DPLYLIDGSAFFYRGFHAYPDLKRSDGVPTNAMFFVLRTLLKVIKEEKPKYLVFILDGKG 71 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 K FR EL++ YK+ RPPMPDDLR+QIEPL + +G+PL+ G EADD I +LA Sbjct: 72 KNFRHELYDQYKAQRPPMPDDLRSQIEPLKEALNVIGVPLIVSEGEEADDCIASLAARY- 130 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTM--TNTILGPEEVVNKYGVPPELIIDFLALMG 184 K+ RPV+I DKD+ Q + N+ + + I + + PE DF AL+G Sbjct: 131 KSERPVVILGADKDLKQCLDENVFMWDPAGKKEKITSLADFREDTKLEPEQWADFQALVG 190 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 DS+DNIPGVPGVG+ TA ++ L+ + +K+ + K++ E + Sbjct: 191 DSADNIPGVPGVGKVTATKIMAEYPTLEDIRDNYDKL-------KPAIQKKMKDELENIF 243 Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVE------AGKWLQ 298 + +L ++ + +Q E++ + YEF+ DV+ +G + Sbjct: 244 VYRELTRMRLGSCSDCDLKQCELRSVDGDRAAEFMTTYEFRSLVRDVKSLFSATSGSGVP 303 Query: 299 AKGAKPAAKPQETSVADE 316 A +K +A Q + +E Sbjct: 304 AGNSKKSASGQASLFGEE 321 >UniRef50_C2D755 DNA-directed DNA polymerase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D755_9ACTN Length = 1030 Score = 350 bits (897), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 197/502 (39%), Positives = 296/502 (58%), Gaps = 22/502 (4%) Query: 432 GIELRGIA----FDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFN 487 +EL I+ FD L +Y+LNS A + +L +L T + + Sbjct: 544 SLELSDISTAALFDVGLAAYLLNSDANDYSWQTLCSAYLP--TFVYPDTTDDT------- 594 Query: 488 QIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKI 547 +E YA E + ++ + +L G ++F +E+PL+PVL +ERNG+ Sbjct: 595 ----DEPNEYALEA--IAVRALYPVLRELLHTDGSDDLFYELELPLIPVLLHMERNGIYC 648 Query: 548 DPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGI--KPLKKTPGG 605 D +L S L+ L + + +A ++FN+ S QL +LF+ G+ K LKKT G Sbjct: 649 DKHLLAEQSRALSHELNAMSLELRRLAQQDFNIDSPMQLSHVLFDVWGLPTKGLKKTRRG 708 Query: 606 APSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTA 665 ST+ + L L++ ++IL+YR K+K+TY D L I GR+H++++Q + A Sbjct: 709 YYSTNAQTLASLSMADERVQLILDYRERMKIKNTYLDALVHDIR-SDGRIHSTFNQTIAA 767 Query: 666 TGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLT 725 TGRLSS+DPNLQNIP R+ G R+R+AF+ P +++ ++ DYSQIELR++AHLS+D+ L+ Sbjct: 768 TGRLSSSDPNLQNIPTRSSLGHRVRKAFVLPRNHLFLACDYSQIELRLLAHLSQDEHLIH 827 Query: 726 AFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQ 785 AF G D H ATAA +F + + VT R AKA+NFG++YG AFGLA L I RKEAQ Sbjct: 828 AFQTGADFHAATAARIFHVSPDEVTPALRSRAKAVNFGIVYGQQAFGLATSLKISRKEAQ 887 Query: 786 KYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAIN 845 + +D YFE YPGV ++++ + A+E YV T+ GR+ ++ I S N R+ AER A+N Sbjct: 888 EMIDRYFEAYPGVRKFLDESVQFAREHSYVPTMYGRKRHIAQIDSRNFQLRSFAERTAMN 947 Query: 846 APMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLME 905 PMQG+AADIIK AMI V+ ++I+Q+HDEL FEV ++++ V+ + + ME Sbjct: 948 HPMQGSAADIIKLAMIEVEKQFAQLGLASKLILQIHDELDFEVVPEELERVSSVVKRAME 1007 Query: 906 NCTRLDVPLLVEVGSGENWDQA 927 L VPL+ E+ +NW A Sbjct: 1008 GVVTLRVPLIAEISYADNWADA 1029 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 92/271 (33%), Positives = 151/271 (55%), Gaps = 15/271 (5%) Query: 9 LILVDGSSYLYRAYHA-FPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 + ++DG+S ++RA+HA P++ G T A+ G NML L+ + P FD Sbjct: 70 IAVIDGNSLMHRAFHAIMQPMSAPDGRSTNALLGFFNMLIKLVRSFSPDGIICAFDKGKP 129 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 R ++ YK+ RPPM L Q + +++A+ +P++ + G E DD++GTLA + E Sbjct: 130 QVRIDMLPQYKAQRPPMDPSLHEQFPMVKELLRALQIPVVELQGWEGDDILGTLAHQGEL 189 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKY-GVPPELIIDFLAL 182 G +L+ TGD+D+ QL T ++++++T I+ PE+V + Y G+ P L+ DF L Sbjct: 190 QGYSMLLFTGDRDIYQLATEHVSVVSTKKGVSDVRIMTPEDVDDLYHGITPNLVPDFYGL 249 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 GD+SDNIPGVPG+G K A AL+ G L+ + A ++++G M L + + Sbjct: 250 KGDTSDNIPGVPGIGPKRAAALIVEYGSLEGVIAHADQVSG-------KMGENLRNHIDD 302 Query: 243 AYLSYQLATIKTD--VELELTCEQLEVQQPA 271 A LS ++ATI+ D + ++L PA Sbjct: 303 ARLSKRVATIRRDAPITVDLCAAAFPTFDPA 333 >UniRef50_C0E901 Putative uncharacterized protein (Fragment) n=2 Tax=Clostridiales RepID=C0E901_9CLOT Length = 890 Score = 350 bits (897), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 182/404 (45%), Positives = 264/404 (65%), Gaps = 2/404 (0%) Query: 524 NVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSST 583 ++ +IE+PL VL+ +E G ++D + E L + + + ++ + AGEEFN++ST Sbjct: 487 SLLHDIELPLSEVLANMENEGFQVDVAGVRTFGEMLQVEIERITQEIYGYAGEEFNINST 546 Query: 584 KQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDK 643 ++L ILF+K G+ KKT G ST+ +VLE+L +P+ ++LEYR L KL STY Sbjct: 547 RELGAILFDKLGLPTGKKTKTGY-STNVDVLEKLIPKHPIAGLVLEYRKLTKLSSTYVTG 605 Query: 644 LPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVS 703 L + P RVH+ + Q T TGR+SST+PN+QNIP+R E G ++R+ F+A V++ Sbjct: 606 LLKVTGPDQ-RVHSVFRQTETRTGRISSTEPNMQNIPIRTELGSQMRKFFVAKPGCVLLD 664 Query: 704 ADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFG 763 ADYSQIELRI+AH+S D ++TAF EG DIH ATA++VFG+P E + +E RR AKAINFG Sbjct: 665 ADYSQIELRILAHISNDSRMITAFREGADIHTATASQVFGVPAEVLPAELRRRAKAINFG 724 Query: 764 LIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRL 823 ++YG+ A+ L++ +N+ EA++Y++ Y Y GV +YM + + GYV+T+ GR Sbjct: 725 IVYGIGAYSLSQDINVSVAEAKEYIENYLHTYSGVRQYMNDIVESSAKSGYVKTMFGRVR 784 Query: 824 YLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDE 883 +LP+I SSN +A ER A+N P+QGTAADIIK AM+ V L+ E ++I+QVHDE Sbjct: 785 HLPEITSSNHNTKAFGERVALNTPIQGTAADIIKIAMVKVYRRLKEEGLSAQLILQVHDE 844 Query: 884 LVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 L+ EV K D + + ME+ L VPL V+V GENW A Sbjct: 845 LLIEVSKADAPRAKVILKEEMEHAADLSVPLSVDVSEGENWYDA 888 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 97/305 (31%), Positives = 163/305 (53%), Gaps = 12/305 (3%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 ++ VDG+S L R+Y+ L+NS G PT A++G N++ +I + +P AV FD T Sbjct: 43 VLAVDGNSILNRSYYGVRNLSNSKGVPTNAVFGFFNVMDKMIKEVEPDCVAVAFDLSAPT 102 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR + ++ YK+ R MP++L Q+ +++ G ++ G EADD++GT AR + Sbjct: 103 FRHKQYDGYKAGRKGMPEELAVQLPITKELIQLFGYHIVECEGFEADDIMGTFARLCREQ 162 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTN---TILGPEEVVNKYGVPPELIIDFLALMGD 185 +I+TGD+D QLV +T + TN + +++V +YGV P +I+ ALMGD Sbjct: 163 KAECVIATGDRDNLQLVGDGVT-VRLATNKEAILFDTDKIVQEYGVTPPELIEVKALMGD 221 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 SSDNIPGV G+GEKTA +L+ + + +++ + R ++A E +E+A + Sbjct: 222 SSDNIPGVKGIGEKTALSLVSKYHSVSYILDHAQELDATT-RVKNLLSA--EGARELAEM 278 Query: 246 SYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPA 305 S L TI + ++ V L +F + E K++ ++ G +PA Sbjct: 279 SRMLGTIVDNAPIDGDLSHYAVGPRDDAGLYRIFSELELKKFLE-----RYHLQPGNEPA 333 Query: 306 AKPQE 310 P++ Sbjct: 334 PAPEK 338 >UniRef50_Q1AUF6 DNA polymerase I n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AUF6_RUBXD Length = 843 Score = 348 bits (892), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 212/501 (42%), Positives = 302/501 (60%), Gaps = 32/501 (6%) Query: 432 GIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIAL 491 G+ +RG FDT L Y+ G +D+D+LA + I+ E + + A Sbjct: 362 GVGVRGAHFDTYLAGYLAKPGLGSYDLDALA----TERGISDVEASHADPVVREAARRAA 417 Query: 492 EEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKV 551 DA++ + G ++ +E+PL VL+ +ER G+ +D + Sbjct: 418 LVRALAPRLDAEL-------------REMGLSRLYYEVELPLADVLAEMERVGMPVDART 464 Query: 552 LHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSE 611 L E+ R+AELE+ E G FN+ S KQL +LFE+ G+ P+++T G ST Sbjct: 465 LEEVGREIERRIAELEEAIFEDVGHPFNIGSPKQLSEVLFEELGLPPVRRTKTGY-STDA 523 Query: 612 EVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSS 671 +VL++LAL++P+ + I+ +R LAKLK TY + L L + + GR+HT+ +Q TATGR+SS Sbjct: 524 KVLQQLALEHPIAERIIAWRELAKLKGTYVEGL-LKLVGEDGRIHTTLNQTTTATGRISS 582 Query: 672 TDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGK 731 PNLQNIPVR E G RIR AF A ++V ADYSQIELRI+AH+SR+ L+ AF G+ Sbjct: 583 DSPNLQNIPVRTETGMRIRDAFTASPGRLLVVADYSQIELRILAHMSREPALVEAFKNGE 642 Query: 732 DIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQL-NIPRKEAQKYMDL 790 DIH TAAEVF + E+VT E RR AK +NFG++YG+S +GLA +L N+ EA +Y+ Sbjct: 643 DIHTRTAAEVFDVRPESVTPELRRRAKMVNFGILYGISGYGLATRLGNVHPAEADRYIQR 702 Query: 791 YFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQG 850 YFER+P V E++ ++ A+A+E GY TL GRR Y+P++++ N R ER A NA +QG Sbjct: 703 YFERHPRVTEFIRKSLAEAEELGYATTLFGRRRYVPELRNKNKNVRKLGERIAFNARVQG 762 Query: 851 TAADIIKRAMIAVDAWLQAEQPRV-----RMIMQVHDELVFEVHKDDVDAVAKQIHQLME 905 +AADIIK AM+ + PR+ M+MQVHDELVF+V +D V+ VA + M Sbjct: 763 SAADIIKVAMVDL-------APRLGPLGADMLMQVHDELVFDVDRDRVEEVAALAAERMV 815 Query: 906 NCTRLDVPLLVEVGSGENWDQ 926 LD PL VEV +GE W + Sbjct: 816 AAYDLDPPLEVEVKAGERWGR 836 Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 108/280 (38%), Positives = 167/280 (59%), Gaps = 12/280 (4%) Query: 11 LVDGSSYLYRAYHAFP-PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKTF 69 L+DG S LYRA++A P + S+G PT A+YG +M+ L+ + VV+D F Sbjct: 16 LIDGYSLLYRAFYALPQSIATSSGLPTNALYGFTSMVLKLLDSDEELGIGVVWDGGLPAF 75 Query: 70 RDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKAG 129 R E++ YK+ R MP++LR Q++ L +++AM +P++ V G EADDV+ T++R + G Sbjct: 76 RTEVYPEYKAQRSAMPEELRVQLDHLDEILEAMNIPVVRVEGFEADDVLATVSRRLPE-G 134 Query: 130 RPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPELIIDFLALMGD 185 + I TGD+D QLV + ++ T + G EV+ +YGV PE I D+ AL+GD Sbjct: 135 VELYIVTGDQDAMQLVDGRVRVLRTTRGVSETKVYGRREVMEEYGVSPEQIPDYKALVGD 194 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 SDNIPGV G+G K+A ALL+ G L+ LY E++ + RG + KLE+ +E A+L Sbjct: 195 PSDNIPGVRGIGPKSAAALLRRFGSLEALY---ERLEEVEARGTRR---KLEEGRENAFL 248 Query: 246 SYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFK 285 S +LA ++ D ++ E+L + A L ++YEF+ Sbjct: 249 SLRLARMRFDAPVQFDPERLRFRGVAPGVRDVLLRRYEFR 288 >UniRef50_B0MR22 DNA polymerase I n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MR22_9FIRM Length = 829 Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 179/408 (43%), Positives = 260/408 (63%), Gaps = 2/408 (0%) Query: 521 GPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNL 580 G V +IE+PL VL +ER GV ID + +E+ + ++ ++ +E AG EFN+ Sbjct: 424 GSAAVLTDIEIPLATVLVAMEREGVSIDADGIKAFGKEVCEKAEKISREIYEYAGYEFNI 483 Query: 581 SSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTY 640 S KQL ++LFEK + KKT G ST+ +VLE L +P+ +I EYR L KL++TY Sbjct: 484 GSPKQLGSVLFEKLALPSAKKTKTGY-STNADVLESLMDKHPIVPLITEYRALTKLQNTY 542 Query: 641 TDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYV 700 L L + + GR+H+++ Q T TGR+SS +PN+QNIPVR GR +R+ F A + + Sbjct: 543 VTGL-LKVVGEDGRIHSTFKQTETRTGRISSAEPNIQNIPVRTPLGREMRRFFTAKDGCL 601 Query: 701 IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAI 760 +V ADYSQIELR++AH+S D+ + AF +G DIH TA++VF P+E VT + R AKA+ Sbjct: 602 LVDADYSQIELRVLAHISGDEIMKKAFLDGVDIHTVTASQVFNQPIEWVTPDLRSKAKAV 661 Query: 761 NFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDG 820 NFG++YG+ AF L++ + + +A +Y+ Y +Y G+ YME+T A+AK GYVET+ G Sbjct: 662 NFGIVYGIGAFSLSKDIGVSVPKASEYIRSYLSKYSGIAHYMEQTVAKAKRDGYVETMFG 721 Query: 821 RRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQV 880 RR Y+ ++ + N +A ER A N P+QGTAADIIK AMI V L+ R+I+QV Sbjct: 722 RRRYIKELAAKNKNLQAFGERVAKNTPIQGTAADIIKIAMIKVYNRLKESGLDARLILQV 781 Query: 881 HDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 HDEL+ E +D + VA + + MEN +L VP+ V+V G+ W H Sbjct: 782 HDELIVEAKEDCAEKVALLLKEEMENAVKLTVPMTVDVNIGKTWYDTH 829 Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 102/247 (41%), Positives = 147/247 (59%), Gaps = 9/247 (3%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 +++DG+S L RA++ LTNS G T A+ G +N L L P AV FD K T Sbjct: 3 FLIIDGNSILNRAFYGIRVLTNSRGVATNAVTGFMNTLLMLEKDVNPDMIAVAFDLKALT 62 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR ++++ YK++R MP+DL Q+ + ++ AMG+ ++ G EADD+IGT++ Sbjct: 63 FRHKMYDGYKANRKGMPEDLAQQLPYMKKIITAMGITIIEKEGFEADDIIGTVSAACADK 122 Query: 129 GRPVLISTGDKDMAQLVTPNIT--LINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDS 186 P +STGD+D QLV +T L T + P+ ++ +YGV P+ +I+ ALMGDS Sbjct: 123 KIPCTVSTGDRDSFQLVNDYVTVRLAKTKGDIYYTPDVIMEEYGVTPKQMIEVKALMGDS 182 Query: 187 SDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAG-LSFRGAKTMAAKLEQNKEVAYL 245 SDNIPGVPG+GEKTA +L++ +D +Y E I L +G +T KLE KE Y+ Sbjct: 183 SDNIPGVPGIGEKTALSLIKEFASVDGVY---ENIGSTLITKGVRT---KLENGKESCYM 236 Query: 246 SYQLATI 252 S QLA I Sbjct: 237 SRQLAEI 243 >UniRef50_Q72ES3 DNA polymerase I n=3 Tax=Desulfovibrio vulgaris RepID=Q72ES3_DESVH Length = 1015 Score = 343 bits (880), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 198/495 (40%), Positives = 291/495 (58%), Gaps = 35/495 (7%) Query: 440 FDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQ--IALEEAGRY 497 FD L +Y+L+ + LA RW G ++ T N +ALE A Sbjct: 550 FDLGLAAYLLDPEERDYGWPRLAARW------------GDMLDRSTDNPGLLALEMAQGM 597 Query: 498 AAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSE 557 A A +L + +E+PLVPVL+ +E G+ +D + Sbjct: 598 AGRLAGASLD----------------TLMRTLELPLVPVLADMEEAGIAVDRTAFAAFLD 641 Query: 558 ELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEEL 617 E+ L + ++ ++ AG +FN+ S +QL +LF G+ + KT GG +TS++ LE+L Sbjct: 642 EVQHELDRITQEVYKAAGGQFNIRSAQQLGELLFGTLGLPTVGKTRGGQATTSQDALEKL 701 Query: 618 ALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQ 677 + +P+ +IL++R L KL+STY + LP +++ GR+H++++Q TATGRLSS++PNLQ Sbjct: 702 SGRHPVVDLILDFRKLEKLRSTYLEPLPKLVD-AAGRIHSTFNQLATATGRLSSSNPNLQ 760 Query: 678 NIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRAT 737 NIP R + GRR+R F A E ++VSADYSQIELR++AH+S+D LL AF EG DIHR T Sbjct: 761 NIPARGDLGRRMRSCFTAAEGNLLVSADYSQIELRVLAHMSQDPTLLAAFREGADIHRRT 820 Query: 738 AAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPG 797 A ++ E VT +QRR+AK INFGLIYGM L ++L I EA+++++ YF R Sbjct: 821 AGLLYDTAPEDVTPDQRRNAKTINFGLIYGMGPQKLGQELRITVNEAKQFIERYFSRLQH 880 Query: 798 VLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIK 857 + + + A A+EQG+V TL GRR LP++ S N R+ A R AIN +QG+AADIIK Sbjct: 881 LRNFYDNVEAAAREQGHVTTLAGRRRLLPEMHSENTQLRSQARRQAINTLIQGSAADIIK 940 Query: 858 RAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENC----TRLDVP 913 AM+A + R+I+QVHDEL+ EV + + A +++ LM LDVP Sbjct: 941 LAMLAAHDDPVLHGLKARLILQVHDELMLEVPEANAQAAGERLALLMSEVRPGGVTLDVP 1000 Query: 914 LLVEVGSGENWDQAH 928 LLV+ G+G++W AH Sbjct: 1001 LLVDWGAGKDWGSAH 1015 Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 103/284 (36%), Positives = 151/284 (53%), Gaps = 14/284 (4%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 Q PL L+DGS++++R ++AF + S G PT A++ V +L L+ + KP H A V D K Sbjct: 11 QEPLWLMDGSAFIFRGFYAFQNMQRSDGFPTNALFIVTRILLRLLREEKPRHFAFVLDGK 70 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 G TFR +LF YK+ R P+ L Q+EP+ MV A+GLPL G EADD I +LA Sbjct: 71 GPTFRHDLFPLYKAQRAATPEPLVQQLEPIRRMVTALGLPLEVSDGCEADDCIASLAARY 130 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLA 181 RPV+I DKD+ Q + PN+ L + T L + G+ P D A Sbjct: 131 RDE-RPVVIIGADKDLKQCLHPNVVLWDPGAKEEKLTTLA--SFTAETGLTPAQWPDVQA 187 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 ++GD+SDNIPG+PGVG KTA + L+ + +++ + K EQ+ + Sbjct: 188 VIGDTSDNIPGIPGVGPKTASKIFADFPTLEDIRDGFDRL-------PPNLQKKFEQHLD 240 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFK 285 +L QL T+ D +LT E+L VQ A +++E + Sbjct: 241 AMFLYRQLTTLAIDRCADLTPERLSVQPLDARTASTFLQEFELR 284 >UniRef50_C3XEZ4 DNA polymerase I n=3 Tax=Bacteria RepID=C3XEZ4_9HELI Length = 1102 Score = 341 bits (875), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 221/645 (34%), Positives = 339/645 (52%), Gaps = 71/645 (11%) Query: 333 ILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAH----- 387 I D + L + + + K + AFD ET+ LD A++VG SF + A Y+P H Sbjct: 472 ITDSKELFSLLESIPKGNLVAFDCETNGLDVREADMVGFSFCFDGLHAYYVPFLHGGIKR 531 Query: 388 ------------------------------------------DYLDAPDQISR---ERAL 402 D +AP QIS+ ++AL Sbjct: 532 EKSKYEVMKSQSISQNLFSTEEAKPTFSLFDDTTMSKDSADNDTTNAPAQISQSDAKKAL 591 Query: 403 ELL--KPLLEDEKALKVGQNLKYDRGI-LANYGIELRGIAFDTMLESYILNSVAGRHDMD 459 E+L PL +G N+K+D I N+GI+ + D+ML ++ L+ + +D Sbjct: 592 EILFSYPL--------IGHNIKFDLHIAWHNFGIKPKHTPQDSMLLAW-LDDPSQSVSLD 642 Query: 460 SLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKH 519 +L ++ H I F +I K + TF+ I ++ A YAAEDA T QL+ L H Sbjct: 643 NLMKKHFNHNMIAFSDIVPK---KATFDSIDIKTASNYAAEDAAATFQLYFYFKNTLYPH 699 Query: 520 KGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFN 579 L +++E P + L +E G+ I+ N + L +L+++ +E AG FN Sbjct: 700 LFTLA--KDLEFPFIRTLCAMEDCGIAINYSYFKNLKTTFSHTLQQLQQEIYEKAGVSFN 757 Query: 580 LSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKST 639 L+S KQ+ ILF+ + +K G ST E L L +P+ ++LEYR + KL ST Sbjct: 758 LNSPKQVAEILFDTLKLDTKRKGKSGY-STDEATLLALKDSHPVVPLLLEYREIFKLFST 816 Query: 640 YTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY 699 Y + + L + R++T++ Q T TGRLSS PNLQNIPVR+E GR IR+ F++ + Y Sbjct: 817 YIEPI-LKLGKNENRIYTTFLQTGTNTGRLSSKSPNLQNIPVRSEMGRSIRKGFVSRDGY 875 Query: 700 VIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKA 759 ++S DYSQIELR++AH S DK LL +F DIH TA +F + S R AK+ Sbjct: 876 KLLSLDYSQIELRLLAHFSGDKVLLESFHNNADIHAETAKLLFKDSNKDF-SLLRSIAKS 934 Query: 760 INFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLD 819 INFGLIYGM A L++ LNI + EA++Y++ YF +P V +++E + + GY TL Sbjct: 935 INFGLIYGMGARKLSQTLNITQTEAKQYIEDYFATFPSVKQFLESQKDSILKNGYSSTLL 994 Query: 820 GRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQ 879 GR+ Y D S+ RA R +N QG+AAD+IK +M + +++ M++Q Sbjct: 995 GRKRYF-DFFSATEFMRANFLREGVNTIFQGSAADLIKLSMNEIYKKIESLDNDCFMLLQ 1053 Query: 880 VHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 VHDEL+FE+ +++++K++ ++MEN +L VPL+ + G W Sbjct: 1054 VHDELIFEIKDSIIESLSKELKEIMENIYKLKVPLVCNLSIGNTW 1098 Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 89/250 (35%), Positives = 142/250 (56%), Gaps = 3/250 (1%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 +ILVD + +R+Y+A PPL NS PT + G ++ +L ++K + + G Sbjct: 8 VILVDTFGFFFRSYYALPPLHNSKHFPTSLLTGFATLIFNLYKEHKDSCIIFTLEGGGTN 67 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 R E + YK++R P DL AQ+ ++ MGLP L++ G EADD I TLA A+K Sbjct: 68 RRKEFYPQYKANRKESPQDLLAQLPVAIEWLEKMGLPTLSLQGYEADDCIATLATLAKKD 127 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSD 188 G I + DKD+ QL++ I + + + +E K+GV P I + +++GDSSD Sbjct: 128 GYETQIISHDKDLYQLISEGIYIFDYAKKQAITQKECYEKFGVLPNDFIMYQSIVGDSSD 187 Query: 189 NIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAG--LSFRGAKTMAAKLEQNKEVAYLS 246 N+PG+ G+G K AQ++L L++LY EK +S G +T A ++++KE A++S Sbjct: 188 NVPGIKGIGPKGAQSILAHFKSLESLYESIEKDYENIVSLLGKRT-AGLIKEHKEQAFIS 246 Query: 247 YQLATIKTDV 256 L T++TD+ Sbjct: 247 RNLVTLRTDL 256 >UniRef50_C1SHV2 DNA polymerase I n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHV2_9BACT Length = 798 Score = 341 bits (874), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 186/424 (43%), Positives = 265/424 (62%), Gaps = 8/424 (1%) Query: 505 TLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLA 564 + +H + D K G L V+ +E+P+ L ++E NG+ D V+ +++L +A Sbjct: 373 NIVVHAQEEKDKLKANGLLEVYLGMELPVAYCLGKMENNGIGFDKDVMAKVADKLQDEVA 432 Query: 565 ELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLP 624 E+ +K G + NL+S KQLQ LFE+ G++ LKKT G ST EE L + PL Sbjct: 433 EISEKIKTFVGYDINLNSPKQLQVFLFEELGVEGLKKTKTGF-STDEESLRAMIPMNPLY 491 Query: 625 KVILE----YRGLAKLKSTYTDKLPLM-INPKTGRVHTSYHQAVTATGRLSSTDPNLQNI 679 +LE YR LAKL STY LPL GR+H+S+ Q TATGRLSS +PN+QNI Sbjct: 492 AHVLEDILVYRELAKLLSTYA--LPLKDYVLADGRIHSSFRQTGTATGRLSSVNPNMQNI 549 Query: 680 PVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAA 739 P++ + G ++R+AFI E Y VS DYSQIELRI+AHL+ D+ L A+ +DIH TA+ Sbjct: 550 PMKGKWGVKLREAFIPREGYSFVSFDYSQIELRILAHLTGDEHLKEAYRNNEDIHTKTAS 609 Query: 740 EVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVL 799 +FG+ E V S RR AKA+NFG++YG+S FGL+R + +KEA+K+++ YF YP V Sbjct: 610 GIFGVAPEKVDSGMRRLAKAVNFGILYGLSPFGLSRDTGVSQKEAKKFIEKYFATYPKVK 669 Query: 800 EYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRA 859 ++E+ + KE+GY ETL GR+ ++ +I+S N ER A N PMQG+AADIIK A Sbjct: 670 GFIEKIAKETKEKGYAETLAGRKRFIREIRSKNRTVAMRGERIATNVPMQGSAADIIKLA 729 Query: 860 MIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVG 919 M+ A L ++ +++QVHDELVFEV D+D + ++ +ME LDVPL+V Sbjct: 730 MVECQAVLDDKEYDALVVLQVHDELVFEVLDKDIDEFSDRVRSIMEGVMELDVPLVVNGA 789 Query: 920 SGEN 923 +G+N Sbjct: 790 AGKN 793 Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 98/243 (40%), Positives = 139/243 (57%), Gaps = 10/243 (4%) Query: 10 ILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKTF 69 I++DGS +R YH PPLTNSAG PT ++GV+ + +LI +Y + AVVFDAKGK Sbjct: 3 IVIDGSYIAFRTYHKSPPLTNSAGVPTSVIHGVMQSIITLINKYGRENIAVVFDAKGKNR 62 Query: 70 RDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKAG 129 R E+ YK+ R P+DL Q + ++ +G+ V G E DD++ T+A + Sbjct: 63 RHEIHPEYKATRDATPEDLGLQFGIMDELIPLLGVAYYKVDGYEGDDIMATIAAHTKD-- 120 Query: 130 RPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSDN 189 V + T DKD+ Q+V + + ++ G + V+ K+GVPPE + + LAL GD++DN Sbjct: 121 -DVGMLTKDKDIYQIVDDRVKIYDSQKGEFFGRDMVIEKFGVPPEKVRELLALAGDTADN 179 Query: 190 IPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQL 249 IPGV GVG KTA LL G LD +Y E + G + KL NK+ AYLSY L Sbjct: 180 IPGVAGVGVKTAAKLLNEHGSLDGIYENIESVKG-------KLKDKLIDNKDSAYLSYDL 232 Query: 250 ATI 252 + Sbjct: 233 VGL 235 >UniRef50_UPI0001C32326 DNA polymerase I n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C32326 Length = 884 Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 173/402 (43%), Positives = 260/402 (64%), Gaps = 1/402 (0%) Query: 523 LNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSS 582 L +F+++E+PLV VL +E G+++D ++L + LE++ E+ GEEF + S Sbjct: 480 LPLFDDVELPLVRVLRAMETAGLRLDTELLATIRTRVMDEAVALEREIWELTGEEFMIGS 539 Query: 583 TKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTD 642 +QL ILFEK G+ ++ G ST VL+ + ++P+ + I +R L KL STY D Sbjct: 540 PQQLGQILFEKLGLSRKRRGKTGY-STDARVLQAIRGEHPVIEKIERWRELTKLASTYLD 598 Query: 643 KLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIV 702 LPL+I+P+ R+HT+++Q ATGRLSST+PNLQNIP+R GR IR F+A V++ Sbjct: 599 ALPLLISPEDHRLHTTFNQVTAATGRLSSTNPNLQNIPIRTPLGREIRACFVAEPGNVLI 658 Query: 703 SADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINF 762 SADYSQ+ELR++AH++ ++ L F G+D+H ATAA + G+ E + + R AK +N+ Sbjct: 659 SADYSQVELRVLAHIAGEEVLKEIFRRGEDVHTATAAAILGIDPEQLDAGSRSKAKMVNY 718 Query: 763 GLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRR 822 G++YG+SAFGLA +L IPR+EAQ+++D Y + +P V ++ T QA +QGYV TL GRR Sbjct: 719 GIVYGLSAFGLADRLQIPREEAQEFIDRYLDGFPAVQAFIRTTIEQATDQGYVTTLMGRR 778 Query: 823 LYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHD 882 +P++++ N R ER A+N +QGTAAD+IK AM+ D L A R R+I+Q+HD Sbjct: 779 RQIPELRARNYQMRQLGERLAVNTVIQGTAADVIKLAMVNADRALHASGLRTRLILQIHD 838 Query: 883 ELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 EL+FE ++ + + M + LD PL+V+ G G NW Sbjct: 839 ELLFEGPAEEAEQARDLVVPQMVDALELDPPLVVDAGIGPNW 880 Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 107/288 (37%), Positives = 165/288 (57%), Gaps = 14/288 (4%) Query: 5 PQNP--LILVDGSSYLYRAYHAFP-PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 P P L L+DG+S YRA+ A P + S G PT A++G +ML ++ +Y P V Sbjct: 22 PDKPDELFLIDGNSLAYRAFFALPESIATSTGFPTNAIFGFASMLVKILTEYGPRATIVA 81 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 +D +G + R E++ YK+ R PD + Q L +V++ G +++ G EADDVI TL Sbjct: 82 WD-RGHSGRREVYPEYKAQRSSRPDLFKQQWPHLEPLVESFGYQNVSLDGYEADDVIATL 140 Query: 122 AREAEKAGRPVLISTGDKDMAQLVTPNITLINT---MTNT-ILGPEEVVNKYGVPPELII 177 A A+ AG PV++ TGD+D QLV + ++ T +T T + V+++YG+PPEL+ Sbjct: 141 AERAKAAGIPVMVVTGDRDSFQLVDEGVQIMATSRGITETRTYDRQGVIDRYGIPPELVP 200 Query: 178 DFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLE 237 DF+ L GD+SDNIPGVPG+G+KTA LL G L+ + A I A+ L Sbjct: 201 DFIGLKGDTSDNIPGVPGIGDKTAAQLLNDFGDLEGVLANAHTIR------ARKRRENLI 254 Query: 238 QNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFK 285 ++ E A +S QLAT++ D+E+ + + +P L F+++E + Sbjct: 255 EHAEDARVSKQLATMRRDLEVAIDVAAVHGAEPDRSRLRETFREFELR 302 >UniRef50_Q1LTX9 DNA polymerase I n=1 Tax=Baumannia cicadellinicola str. Hc (Homalodisca coagulata) RepID=Q1LTX9_BAUCH Length = 306 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 166/299 (55%), Positives = 216/299 (72%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 L+LVDGS YLYRAYHAFP LTN+ GEPTGA+YGV+NML SL QY + A++FDA G+ Sbjct: 2 LLLVDGSFYLYRAYHAFPLLTNNLGEPTGAIYGVINMLNSLFKQYSTSSIAIIFDAYGQN 61 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR ++F YK +R M DL QI+PL+ ++++MGLPLL V GVE+DDVIGTLA +A Sbjct: 62 FRHKIFHDYKLNRTRMSKDLSCQIDPLYKIIQSMGLPLLVVKGVESDDVIGTLAHQAMCN 121 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSD 188 VLISTGDKDMAQLV+P I L N+ N LGP+EV K+GV PELIID++AL+GD SD Sbjct: 122 NINVLISTGDKDMAQLVSPKIHLFNSTMNMRLGPKEVQKKFGVLPELIIDYIALVGDKSD 181 Query: 189 NIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQ 248 NIPGVPG+G+KTA+ LLQ GGL LY K+ + K +A KL+ +E A+LSYQ Sbjct: 182 NIPGVPGIGKKTAKILLQQFGGLKFLYQNLHKLNHFNLCRNKNLATKLDNYREKAFLSYQ 241 Query: 249 LATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAK 307 LATI+T+V L++T +QL V++P +L+ LFK YEFKRW +++ ++ K A + K Sbjct: 242 LATIRTNVMLDITYDQLIVKEPDYNQLIKLFKHYEFKRWILQLQSAQFPYNKAALSSNK 300 >UniRef50_D2RAL7 DNA-directed DNA polymerase n=2 Tax=Gardnerella vaginalis RepID=D2RAL7_GARVA Length = 1025 Score = 336 bits (862), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 209/562 (37%), Positives = 315/562 (56%), Gaps = 33/562 (5%) Query: 395 QISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAF-----DTMLESYIL 449 Q S + LE+L+ L+ ++ V + K G+L + + +F DT L SY+L Sbjct: 466 QSSDQALLEMLRKFLQKNSSITVLHDYKKHLGLLKSLKLFDSNNSFGTPLLDTRLASYLL 525 Query: 450 NSVAGRHDMDSLAERWLKHKTIT---FEEIAGKGK------NQLTFNQIALEEAGRYAAE 500 ++++AE +L +++ E A +G+ N+++ ++ E A E Sbjct: 526 EPDFRAETLENMAEHYLDIQSVEDNLGENEAKQGELDLLIDNEVSSSEEETNEKQTQARE 585 Query: 501 DADVT-------LQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLH 553 + L LH D +K G + ++EMP+ VL +E G +D + L Sbjct: 586 AKFLKTALLIRLLALHFASTLDDRKQTG---LMTDLEMPISRVLRGMEDVGAAVDMQRLS 642 Query: 554 NHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEV 613 ++ + + A ++AG NL S KQLQ ILFE G+KP ++T G+ +T+ E Sbjct: 643 GMLKQFSADAEFAQNMAWKVAGSSVNLQSPKQLQQILFEHFGLKPTRRTKNGSYTTNAEA 702 Query: 614 LEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINP-------KTGRVHTSYHQAVTAT 666 L+ + + + ++ G A LK T+KL ++ R+HT++ Q + AT Sbjct: 703 LQAMYVKLDPEEPASQFLG-ALLKHRETNKLKQIVQSLIDAAHYDDRRIHTTFEQTIAAT 761 Query: 667 GRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY-VIVSADYSQIELRIMAHLSRDKGLLT 725 GRLSS DPNLQNIP RN GR IR AFI E++ ++S DYSQ+ELRIMAH S DK L+ Sbjct: 762 GRLSSADPNLQNIPNRNAAGREIRAAFIPGEEFEYLMSCDYSQVELRIMAHASHDKTLIE 821 Query: 726 AFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQ 785 AF G D H+ A+ V+ +P+E VT +QR KA+++GL YG+S +GLA+QL+I EA+ Sbjct: 822 AFRSGVDFHKYVASLVYKIPVEQVTPDQRSHVKAMSYGLAYGLSTYGLAKQLSISPAEAE 881 Query: 786 KYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAIN 845 + YF+ + V +Y+E ++AKE GY ET+ GRR Y P + S+N A R AAER A+N Sbjct: 882 MLKNKYFDTFGNVHDYLESLVSKAKELGYTETMFGRRRYFPQLSSNNRASREAAERGALN 941 Query: 846 APMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLME 905 AP+QGTAADI+K AM+ VD L+ + R R+I+Q+HDEL+ E+ + V + + ME Sbjct: 942 APIQGTAADIMKLAMLRVDLGLREAKVRSRVILQIHDELILEISHGEQAQVENIVRKAME 1001 Query: 906 NCTRLDVPLLVEVGSGENWDQA 927 N LDVPL V G G +W A Sbjct: 1002 NAVHLDVPLSVSTGVGVDWQLA 1023 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 90/282 (31%), Positives = 145/282 (51%), Gaps = 13/282 (4%) Query: 9 LILVDGSSYLYRAYHAFPP--LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L++VDG S +RA+ A + +G+ T +++G + ML ++ + KP A+ FD KG Sbjct: 20 LLVVDGHSLAFRAFFAISADNFSTRSGQATNSIWGFITMLSQVVKKEKPDRLAIAFDVKG 79 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 TFR+ + YK R P +L +Q+ + M+KA+G+ + G E DDVIGTLA Sbjct: 80 GTFRNTMLPQYKGTRDAAPQELLSQLPIIQQMLKALGVTYIEKPGYEGDDVIGTLAVMGS 139 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLAL 182 AG L+ +GD+D QL+ NIT++ + + V KY V P+ D AL Sbjct: 140 NAGYRTLVLSGDRDAFQLIDDNITVLYPGQHFKDLKEMDKNAVYEKYHVTPKQYPDLAAL 199 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 G+++DNIPGVPGVG+ A + G L+ + +I+G L +N + Sbjct: 200 RGETADNIPGVPGVGDGYAAKWINQFGSLENIIEHSNEISG-------KKGEALRENIDQ 252 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEF 284 L+ ++ + D++L +T + L A +L L + EF Sbjct: 253 VRLNRKVNALVCDLDLGVTVDDLCFGDVDAAKLGILLSQLEF 294 >UniRef50_Q8I7W9 Mitochondrial DNA polymerase A n=2 Tax=Eukaryota RepID=Q8I7W9_DICDI Length = 1369 Score = 336 bits (862), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 289/1105 (26%), Positives = 490/1105 (44%), Gaps = 198/1105 (17%) Query: 10 ILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV-FDAKG-K 67 +L+DG+ Y+A P LTN G +YG + + +I + KP + VV FD KG Sbjct: 275 VLIDGTLMAYKANATTPSLTNE-GMNVNVLYGFMRSMLKVIDELKPIDSIVVCFDPKGGS 333 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 +FR +L+ YKS+RPP P +L Q+ + + ++ + V G E DD++ T ++ A + Sbjct: 334 SFRRDLYPEYKSNRPPTPPELLQQLLLIPEVTDSINVAFTKVDGYECDDLLATYSKLATQ 393 Query: 128 AGRP----------------------VLISTGDKDMAQLVTPNITLINTMTNTILGPEEV 165 G V I T DKD+ QLV N+++ +T +++ + V Sbjct: 394 EGNKFIEGNDQYDPTHPESNRFNGSQVTIVTDDKDIYQLVNDNVSVYSTRRGSMVDKQGV 453 Query: 166 VNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLS 225 ++K+G P + F +L+GD DNIPG+P +GEKTA +++ G L+++ E I L Sbjct: 454 IDKFGFEPNKFVTFQSLIGDKVDNIPGIPRIGEKTATDIIKKFGNLNSII---ENIDQLP 510 Query: 226 FRGAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFK 285 + + + + ++Q + +SYQLA + +V + L + ++ + + KY F Sbjct: 511 QKFIEPIRSSIDQLR----ISYQLAKLNDNVSINLNLDDIKYKPIDRTKFYNFLDKYNFT 566 Query: 286 RWTADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISY------------------ 327 + VE L + + T++ + +Y Sbjct: 567 SIKSSVEKLNKLFSDNQEITTSTSTTNLETIKKNYSKVEFNYIDDENIKFDEISNEEINQ 626 Query: 328 ---DNYVTILDEETLKAWIAKL--EKAPVFAFDTETDSLDNISANLVG----LSFAIE-- 376 N + D ET + ++ L +K A DTE +D + +G + F+I Sbjct: 627 LKPKNVTMVRDVETARMVVSILMKQKDRFHACDTEVIDIDLKKFSPIGHGKMICFSIYCG 686 Query: 377 PGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELR 436 P V + + ++D D I + L++ K EDE LKV N +DR I N+GI ++ Sbjct: 687 PQVKFHDGNSRVWVDVMDDIEGDEILQVFKEYFEDESILKVWHNYAFDRHIFYNHGINVK 746 Query: 437 GIAFDTMLESYILNSV---AGRHDMDSLAERWLKHKTITFEEIAG------KGKNQLTFN 487 G DT+ + + N+ +G + +++L++ L + +++ G G+ + Sbjct: 747 GFGGDTLHMARLWNASRMNSGGYSLEALSKELLNKPKVPIKDLFGTRKIKADGEEGKSIV 806 Query: 488 QIALEEAGR----------YAAEDADVTL----QLHLKMWPDLQKHKGP--LNVFENIEM 531 LE R Y++ D+++T +H+K+ D++ ++G + + + Sbjct: 807 IPPLERIQRDSKFILNWIEYSSLDSELTWLLRENIHIKL-RDMEWNQGTTMWDFYYLMWR 865 Query: 532 PLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEK------KAHEIAGEEFNLSSTKQ 585 P +L+ +E+ G+K+D L + E+ + E K K H E N S Q Sbjct: 866 PFGHLLTEMEQRGLKVDIDYLKSLEEKAYTDMEENRKVFLNWAKTHSPDAENMNPVSDAQ 925 Query: 586 LQTILF---EKQGIK---PLKK------------------------------------TP 603 +Q + F + + K PL+K T Sbjct: 926 IQQLFFAPVQNKKTKESLPLEKDFECDNLDGTIEVGKTKPKKKKTFYLRGIGMESKSLTT 985 Query: 604 GGAPSTSEEVLEELALDYPLP-KVILEYRGLAKLKSTYTDKLPLMINPKTG--------- 653 G PS L ELA P+ K Y K K+ LP+ + G Sbjct: 986 NGWPSVDSSSLRELAGKNPIDGKYGSAYDFFVKSKNECYKDLPIEEREQMGREASIAINA 1045 Query: 654 --------------------------RVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGR 687 R+HTS + T TGRLSS PNLQN P ++ Sbjct: 1046 LLELGSIGTLLNTFIIPLQKLADSNSRLHTSIN-VNTETGRLSSKKPNLQNQPALEKDRY 1104 Query: 688 RIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVF----- 742 +IR+AF ++ ADY Q+ELR++AH++ K ++TAF G D H TA ++ Sbjct: 1105 KIRKAFTCEPGNTLIVADYGQLELRLLAHITNCKSMITAFQVGGDFHSRTAMGMYPHVKE 1164 Query: 743 --------------GLP----LETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEA 784 G P L+ V + +RR AK +NF + YG +A GL++ + EA Sbjct: 1165 AIDRGEVLLEWDGEGEPPKPLLKNVYASERRKAKTLNFSIAYGKTAHGLSQDWGVTLNEA 1224 Query: 785 QKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAI 844 ++ ++ ++E P VL + +T A + G+ TL GR LPDIK + G + AERA+I Sbjct: 1225 KETLNRWYEDRPEVLVWQRKTIETAHKYGWTRTLMGRYRQLPDIKGNKGM-KGHAERASI 1283 Query: 845 NAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLM 904 N P+QG AADI+ +AM+ ++ + ++ ++IMQ+HDEL+ E + D + LM Sbjct: 1284 NTPLQGGAADIVMKAMLIIEDNKRLKELGFKLIMQIHDELILEGPEQHADEARSIMMNLM 1343 Query: 905 EN--CTRLDVPLLVEVGSGENWDQA 927 N T L + L+V+ + W A Sbjct: 1344 SNPLTTPLLIDLVVDCRYAKTWYDA 1368 >UniRef50_Q30VQ3 DNA polymerase I n=7 Tax=Desulfovibrionales RepID=Q30VQ3_DESDG Length = 931 Score = 334 bits (857), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 180/408 (44%), Positives = 259/408 (63%), Gaps = 5/408 (1%) Query: 525 VFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTK 584 + E +EMPL+PVL+ +E G++I+ E+ L L ++ + +AG +FN+ S++ Sbjct: 525 LMEELEMPLIPVLADMELRGIRINRAEFSGFLAEVQKELDRLTQEVYAVAGGQFNIRSSQ 584 Query: 585 QLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKL 644 QL +LF G+K KT GG STS+ VLE+LA +P+ ILEYR L KL+STY + L Sbjct: 585 QLGELLFGTLGLKAGSKTKGGQASTSQAVLEKLAGKHPVIDTILEYRKLEKLRSTYLEPL 644 Query: 645 PLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSA 704 P + + R+HT+++Q TATGRLSS+ PNLQNIPVR G+R+R+ F A +V+A Sbjct: 645 PRLAQ-ENDRIHTTFNQLATATGRLSSSQPNLQNIPVRGPMGQRMRRCFTAAPGNKLVAA 703 Query: 705 DYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGL 764 DYSQIELR++AH+S D L+ +F +DIH TA ++ + VT +QRR+AK INFGL Sbjct: 704 DYSQIELRVLAHVSADPTLIESFTRNEDIHSRTAGLLYDVTAADVTPDQRRNAKTINFGL 763 Query: 765 IYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLY 824 IYGM LA++L + EA+++++ YF + + E+ + A+E G+V TL GRR Sbjct: 764 IYGMGPQKLAQELKVTLNEAKEFIERYFSKLSHLKEFYDNVEQSAREHGFVTTLAGRRRL 823 Query: 825 LPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDEL 884 LP+I S N R+ A R AIN +QG+AADIIK AM+ A +Q +I+QVHDEL Sbjct: 824 LPEIHSDNNQLRSQARRQAINTVVQGSAADIIKIAMLKAAADETLQQLNAALILQVHDEL 883 Query: 885 VFEVHKDDVDAVAKQIHQLMENC----TRLDVPLLVEVGSGENWDQAH 928 + E +D +A AK++ +M + LDVPL V+ G G+NW QAH Sbjct: 884 LLEAPQDAAEAAAKRLADIMSSVRPGGAALDVPLAVDYGIGDNWGQAH 931 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 112/335 (33%), Positives = 170/335 (50%), Gaps = 24/335 (7%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 + P+ L+DGS++++R ++AF + S G PT A++ VL +L L+ + +P +AA D K Sbjct: 77 KEPVYLIDGSAFIFRGFYAFQNMQRSDGLPTNALFIVLRILLKLLREEQPAYAAFFMDGK 136 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 G TFR L++ YK++R P+ L Q++P+ V+++G+PL G EADD I +LA + Sbjct: 137 GPTFRHALYDQYKANRSATPEPLVQQLDPIRRGVRSLGIPLEVSDGCEADDCIASLAAKF 196 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLIN--TMTNTILGPEEVVNKYGVPPELIIDFLALM 183 K+ RPV+I DKD+ Q + N+ L + +L + G+ P DF A++ Sbjct: 197 -KSERPVIIVGADKDLKQCIDDNVYLWDPGAKQEKLLDLAGFTEETGLSPSQWPDFQAVI 255 Query: 184 GDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVA 243 GDSSDNIPGVPGVG KTA Q TL A E L K A + + Sbjct: 256 GDSSDNIPGVPGVGPKTAA---QIFAEFPTLEAIQENEKALKPGVQKKFAGQWDN----I 308 Query: 244 YLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVE----------- 292 YL +L T+ T L + + VQ A+ +++E + ++ Sbjct: 309 YLYRRLTTLDTGRCTSLALKDMTVQSVDADNAAAFLREFELRTLLRELPQSVPVRPARSG 368 Query: 293 AGKWLQAK-GAKPAAKPQ--ETSVADEAPEVTATV 324 A QA +P A PQ S AD+ P V+ TV Sbjct: 369 AAAMQQASLFGEPQAAPQIPSFSSADQLPAVSGTV 403 >UniRef50_Q057H2 5'-3' exonuclease domain of DNA polymerase I n=2 Tax=cellular organisms RepID=Q057H2_BUCCC Length = 886 Score = 334 bits (857), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 172/402 (42%), Positives = 272/402 (67%), Gaps = 1/402 (0%) Query: 526 FENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQ 585 F+ I+M L+P+L+ IE NGV I K+L + L +L+KK +I E+FN++S+KQ Sbjct: 481 FQLIDMSLLPILAEIENNGVLIKKKILKKQKKNHEKTLKKLKKKIFKITKEKFNINSSKQ 540 Query: 586 LQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLP 645 LQ ILF+K + + KT G ST+E VL++L+ + LPK+IL++R + K+ +TY L Sbjct: 541 LQNILFKKFNLPKIYKTKLGNISTNEIVLKKLSKIHILPKIILQFRLIKKIINTYLRNLI 600 Query: 646 LMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSAD 705 IN KT R+HT+Y+Q T+TGRLSS +PNLQNIP++ + GR++R AFI + +++++AD Sbjct: 601 KSINNKTNRIHTTYNQINTSTGRLSSKNPNLQNIPIKTKIGRKLRIAFITKKKWLLLTAD 660 Query: 706 YSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLI 765 YS IELRI+AH S+DK L+ + KDIH +TA+ +F PLE + R AK INF ++ Sbjct: 661 YSHIELRIIAHYSKDKNLIKDLLKNKDIHISTASHIFNKPLEKIKKYHRNIAKTINFSIL 720 Query: 766 YGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYL 825 YG+S FGL+++LNI K+++ + YF +Y + +++ T AK++GY++TL R+LY+ Sbjct: 721 YGISPFGLSKKLNISIKKSKNLIYRYFLKYNKIKRFIKNTYKTAKKRGYIKTLFKRKLYI 780 Query: 826 PDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPR-VRMIMQVHDEL 884 P+I S N + +A+R IN +Q TA+DIIK++MI + + + P+ +++IMQ+HDEL Sbjct: 781 PNINSKNIYLKNSAKRFCINLMIQNTASDIIKKSMITLHHLFKKKFPKDIKIIMQIHDEL 840 Query: 885 VFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 +FE+ + D + I ++MEN T+L +PL + G+NW + Sbjct: 841 IFEIKEKKKDKIIDVIKKIMENNTKLIIPLYITTKIGKNWKE 882 Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 101/250 (40%), Positives = 152/250 (60%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 +I++DG LY+ Y +F L N G TG +YG + +L LI ++ P +VFD KT Sbjct: 5 IIIIDGHYCLYQNYFSFIKLKNKNGSSTGVLYGYIRLLNKLIEKFNPKKIIIVFDTPKKT 64 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 R +LF YK +R MP++L+ QI PL ++KA+ + ++++ +EADD+IGT++R K Sbjct: 65 NRHKLFTKYKKNRISMPNELKKQINPLKKIIKALNITIISIKKIEADDIIGTISRIFTKK 124 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSD 188 + I + DKDM QL+ N+ +I +L ++ KYGV P+ I DFL L+GD SD Sbjct: 125 KYYIFIYSADKDMTQLIKKNVFVIPGSIKKVLNKNDIFKKYGVYPKSIADFLCLVGDFSD 184 Query: 189 NIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQ 248 NI GV G+G+KTA+ LLQ + +Y EKI+ L + K + LE+NK+ +LSYQ Sbjct: 185 NIRGVLGIGKKTAKILLQSFSSIKKIYKNIEKISFLPIKNIKNIKKNLEKNKKNTFLSYQ 244 Query: 249 LATIKTDVEL 258 L I ++EL Sbjct: 245 LTKINKNIEL 254 >UniRef50_UPI00016C3887 DNA polymerase I n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3887 Length = 824 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 198/477 (41%), Positives = 286/477 (59%), Gaps = 15/477 (3%) Query: 304 PAAKPQETSVAD-EAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 P A P ET ++ AP + SY Y +I E + ++ +L + P F FD ET LD Sbjct: 356 PGAVPTETGASEPTAPAPISDGWSYSGYESITTPERFEQFVGELAQQPAFVFDLETAGLD 415 Query: 363 NISANLVGLSFAIEPGVAAYIPV---AHDYLDAPDQISRERALELLKPLLEDEKALKVGQ 419 + +VG SF+ + G A Y+PV A + + PD + L LKP+ E+ K Sbjct: 416 PVHDPIVGYSFSWQKGTAYYLPVRAPAGEPVLNPDTV-----LAALKPVFENPAIEKRNH 470 Query: 420 NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 N+K+D +LA G+EL G+A D+M+ Y+L+ A H +D L L+H I+ +E+ G Sbjct: 471 NIKFDLIVLAASGVELAGVAGDSMVAHYLLDPGARAHGLDDLTLDELRHTNISIKELIGT 530 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 GK Q+T ++ + YA EDAD LQL P L G +++ +E+PL+ VL+ Sbjct: 531 GKKQITMAEVPVARVRDYACEDADAALQLAAAFEPRLDA-AGLRELYDTLEVPLIRVLAE 589 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 +E G+++D L ++ LA E H +AG FN+ S K+LQ ILF++ + P+ Sbjct: 590 MEHVGIRVDVPFLVQLGVQMGEELAGYEGDIHALAGRAFNIGSLKELQKILFDELKL-PV 648 Query: 600 KKTPG--GAPSTSEEVLEELA-LDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVH 656 +K G PST +E LE LA L + LPK +L YR ++KLKSTY D LP + + K GRVH Sbjct: 649 QKRTGIKNEPSTDQESLERLAALGHELPKKLLAYRKVSKLKSTYVDVLPALAD-KNGRVH 707 Query: 657 TSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAH 716 TS++QA TGRLSS++PNLQN+P R E+G ++R+AFI + +V+V+ADYSQIELR++ H Sbjct: 708 TSFNQASAETGRLSSSEPNLQNVPTRTEQGAQLRKAFIPRDGWVLVTADYSQIELRLLTH 767 Query: 717 LSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGL 773 D L AFAE +D+H A AA++F +P VT QR AK +NFG++YGMSA GL Sbjct: 768 FCGDDTLRAAFAEDRDVHTAVAAQIFKVPEGEVTKAQRGVAKTVNFGVLYGMSATGL 824 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 103/318 (32%), Positives = 156/318 (49%), Gaps = 9/318 (2%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 + L+D +++ ++ P++ G PT A++GV L +L + D + T Sbjct: 10 MYLLDAHGLIFQMFYGVGPMSAPDGRPTNAVFGVTRALMNL-YDRGADYLIATLDHEKPT 68 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR E+ YK+HR P P DL Q + +++AM +P L G EADDV+ T++ +A Sbjct: 69 FRVEIDAAYKAHRDPPPPDLLLQEPMIQQVMEAMRVPFLIAPGYEADDVMATVSTQAAAR 128 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTN-TILGPEEVVNKYGVPPELIIDFLALMGDSS 187 G V + T DKD QL+T + ++N + L V+ +GV P+ ++DF AL+GDS Sbjct: 129 GLDVFLCTSDKDCRQLITDKVKMLNLRKDYEALDAAGVLADWGVRPDQVVDFQALVGDSV 188 Query: 188 DNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL-S 246 D + GV GVG KTA LQ G LD L A ++ AG G KT A + A S Sbjct: 189 DGVKGVAGVGPKTAAKWLQQFGTLDVLIANADQAAG----GPKTRQALKDAVASGALAKS 244 Query: 247 YQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAA 306 +L + DV + E + + LL LF ++ F+ + V K L GA+ A Sbjct: 245 KRLVCLDRDVPVAFDWEGWRRRDWDGQRLLELFHEFGFRGFAERVR--KTLTRSGAQKNA 302 Query: 307 KPQETSVADEAPEVTATV 324 T+ + P V TV Sbjct: 303 DALATAGLNAPPPVADTV 320 >UniRef50_C3U0N4 DNA polymerase I n=1 Tax=uncultured bacterium RepID=C3U0N4_9BACT Length = 803 Score = 332 bits (850), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 190/440 (43%), Positives = 267/440 (60%), Gaps = 12/440 (2%) Query: 495 GRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHN 554 GR E A+ ++ K+ + + G +V+ IE PL+ VL I G+ +D L Sbjct: 360 GRSYFETANFH-EISTKLEERVMSNLGLASVYVKIEQPLMEVLQHINATGITLDTAYLAG 418 Query: 555 HSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKP--LKKTPGGAPSTSEE 612 S + L LE K + AG EFN++S KQ+ +LF++ G+KP KKT GG ST E Sbjct: 419 LSVTMHTELTALEGKIYTHAGREFNINSPKQMGEVLFDEMGLKPKNQKKTAGGQRSTKES 478 Query: 613 VLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSST 672 LE++ D+P+ IL YR L KL STY D LP +++ GR+ T++ Q ATGR++S Sbjct: 479 ELEKMREDHPIITEILRYRELQKLVSTYIDNLPPLVSAD-GRLRTTFVQTGAATGRMASQ 537 Query: 673 DPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKD 732 +PNLQNIP+R EE + IRQAF+A Y IVS DYSQIELRI A LSRD+ ++ FA G+D Sbjct: 538 NPNLQNIPIRTEESKAIRQAFVASPGYSIVSIDYSQIELRIAAILSRDEKMVEIFARGED 597 Query: 733 IHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQL--NIPRKEAQKYMDL 790 +H A VFG+ E VT E RR AK INFG++YGM L L R+EAQ++ + Sbjct: 598 VHTGVAVRVFGVTPEEVTREMRRKAKVINFGILYGMGVNALRGNLGEGTSREEAQEFFNA 657 Query: 791 YFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQG 850 YF + + EY+E T+A A++ GY ETL GRR + P ++S+ RA AER AINAP+QG Sbjct: 658 YFNTFTRLAEYLEETKAFARKNGYTETLFGRRRHFPGMQSTAPFIRAQAERMAINAPVQG 717 Query: 851 TAADIIKRAMIAVDAWLQAEQPR--VRMIMQVHDELVFEVHKDDVDAVAKQIHQLM---- 904 TAAD ++ AM V ++Q E+ V +++QVHDEL+FE+ + ++ ++ +LM Sbjct: 718 TAADAMRVAMNLVYQYIQTEKKTDDVHILLQVHDELLFEIKNNVLETEIPKLVELMQGVL 777 Query: 905 ENCTRLDVPLLVEVGSGENW 924 E VP+ +V G NW Sbjct: 778 EGYDTSGVPIKADVAVGPNW 797 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 116/325 (35%), Positives = 170/325 (52%), Gaps = 20/325 (6%) Query: 2 VQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 ++ + L+L+D + L+RAYHA P + +GEPTGA+YGV+ ML +I +KP + A Sbjct: 12 IKSDKKTLVLLDSHAILHRAYHALPDFASPSGEPTGALYGVVAMLLKIIEDFKPDYIAAC 71 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 FD T+R E F YK R D L QI + A G+P+ G EADD++GT+ Sbjct: 72 FDLPEPTYRHEAFAAYKGTRSKTDDALVQQIIRSRDIFAAFGIPIYEHPGFEADDMLGTI 131 Query: 122 AREA-EKAGRPVLISTGDKDMAQLVTPN----ITLINTMTNTILGPEEVVN-KYGVPPEL 175 A + + V+I++GD D Q V TL + +TIL EE V ++G P+L Sbjct: 132 AYQTRDDKDLTVIIASGDMDTMQCVEKKRVQVYTLKKGIKDTILYDEEAVKERFGFGPKL 191 Query: 176 IIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEK------IAGLSFRGA 229 + D+ L GD+SDNIPG+ G+GEKTA L+ G +D +Y + +K AG+ R Sbjct: 192 VPDYKGLRGDTSDNIPGIVGIGEKTATDLITQFGSIDDIYKKLKKDEAPFLAAGIKPR-- 249 Query: 230 KTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPA-AEELLGLFKKYEFKRWT 288 + L+ +E A S LATI+TD + Q+ A + +L LF + F+ Sbjct: 250 --IIGLLKAGEEEAQFSKMLATIRTDAPITFVPHATHWQERADTDVILNLFSELGFRTLG 307 Query: 289 ADVEAGKWLQAKGAKPAAKPQETSV 313 A + K L A A A P E+ V Sbjct: 308 AKI---KTLFALAADVPANPAESGV 329 >UniRef50_A3EQ00 DNA polymerase I n=3 Tax=Leptospirillum RepID=A3EQ00_9BACT Length = 872 Score = 325 bits (832), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 182/419 (43%), Positives = 269/419 (64%), Gaps = 8/419 (1%) Query: 511 KMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKA 570 K+W D K +G L + ++IE+PL +L ++E G++ID + L + E + ELE++ Sbjct: 459 KLWEDAVK-EGLLELVQSIEIPLGRILYQMEVLGIRIDRQALESARESIEALARELEEEI 517 Query: 571 HEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEY 630 + +AG F + S KQ+ IL+ K G+ +K G ST EE L L+ +PLP+ IL Y Sbjct: 518 YRLAGSRFTILSPKQVGEILYGKLGLPTARKGKTGY-STDEETLTGLSGLHPLPEKILAY 576 Query: 631 RGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIR 690 R + KL STY D + ++ + GR+H ++Q VTATGRLSS++PNLQNIP+R+ GR IR Sbjct: 577 RQMKKLLSTYVDPISRGVDAQ-GRLHGQFNQTVTATGRLSSSNPNLQNIPMRSPAGREIR 635 Query: 691 QAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVT 750 + FIA E+ V++SADYSQIELR++AH S D L+ F +DIH TA +FG P VT Sbjct: 636 KCFIAGENRVLLSADYSQIELRLLAHFSEDPELMAVFERNEDIHARTARLLFGDP---VT 692 Query: 751 SEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAK 810 E RR AK INFG++YGMSAF L+ L + EAQ ++D YF +P V + +AK Sbjct: 693 PETRRKAKTINFGILYGMSAFSLSLDLGVEPPEAQAFIDRYFGAFPKVGPLFDSILEEAK 752 Query: 811 EQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAE 870 + G V T+ GR+ +P++ + + R ER A+N +QG+AAD+IK++M+ ++ + Sbjct: 753 KTGEVRTILGRKRRIPELSAPDRRSREYGERMAVNTVLQGSAADLIKKSMVDF-GQVRKD 811 Query: 871 QPRV-RMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 +P V +++QVHDEL+FEV +D+++ + I LME RL VPL+V+VG G+NW AH Sbjct: 812 RPEVGDLLVQVHDELLFEVREDNLEDASGTIRSLMEGALRLKVPLIVQVGHGKNWVDAH 870 Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 101/286 (35%), Positives = 161/286 (56%), Gaps = 12/286 (4%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 +P + L+L+DG Y++RAYH+ AG PT A+ NML S++ + P+ AVVF+ Sbjct: 21 LPPSTLVLMDGFGYIFRAYHSRVTFVTRAGLPTDAITVFGNMLLSVLKELSPSAMAVVFE 80 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA- 122 ++ R E+ K++RP P D QI + +++ +G+PLL+ G EADD I LA Sbjct: 81 SRTGNVRSEILPEIKANRPEPPSDFLQQIPYIERLIRGIGVPLLSTDGYEADDTIAALAL 140 Query: 123 ---REAEKAGRP--VLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELII 177 ++ P V++ + DKD+ LV+ + + + MT +LGP +V K+GV P I Sbjct: 141 KWLNHHDRTNVPCHVVVLSSDKDLLTLVSERVWVYDPMTKKVLGPSDVREKWGVEPWQIP 200 Query: 178 DFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLE 237 D LAL GD++DNIPGVPG+G+KTA LL G +DTLY + + + R A L Sbjct: 201 DLLALTGDTADNIPGVPGIGQKTAAKLLGNQGTIDTLYEDLDNVVPERIR------ALLR 254 Query: 238 QNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYE 283 +++E + + ++ + +D+ L L E L + P + L L ++ E Sbjct: 255 EHRERVFRNKKVTVLHSDLALSLEPESLSLSPPDMDSLKSLLQELE 300 >UniRef50_C7N982 DNA polymerase I n=6 Tax=Leptotrichia RepID=C7N982_LEPBD Length = 1046 Score = 317 bits (813), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 192/512 (37%), Positives = 296/512 (57%), Gaps = 26/512 (5%) Query: 431 YGI--ELRGIA----FDTMLESYILNSVAGRHDMDSLAERWLKHKTI---TFEEIAGKGK 481 YGI E GI FD +L Y+L G + + E L + TFEE K + Sbjct: 539 YGINEERFGIKCTEYFDILLARYVL----GTESLQEIEEIILDEFGVEIATFEEQFKKER 594 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 + F+ ++ + + ++ +L + LQ + LN+F+ +E L+PVL+++E Sbjct: 595 RKKDFSDVSDDVVCEFLSKRTFFIYKLEIIFRNRLQNEQ-FLNIFDKLESRLIPVLAQME 653 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 G+KID K EL ++ L+ +++A EFN+ S +QL +LFEK I KK Sbjct: 654 ETGIKIDKKYFSEFQNELEEKINMLQSDIYKLADGEFNIDSPQQLGEVLFEKLQIPSGKK 713 Query: 602 TPGGAPSTSEEVLEELALDYPLP-------KVILEYRGLAKLKSTYTDKLPLMINPKTGR 654 T G ST+ EVLE +A + L K +LEYR KL STY + +P + + K R Sbjct: 714 TKTGY-STNVEVLEMIANNRELTEDKRMIGKKLLEYRAYKKLLSTYIEPIPKLAD-KEER 771 Query: 655 VHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIM 714 +HT+++Q T+TGRLSS +PNLQNIPVR ++G RIR F++ E + ++S DYSQIELR++ Sbjct: 772 IHTTFNQNGTSTGRLSSANPNLQNIPVRTDDGIRIRTGFVSKEGHSLISFDYSQIELRVL 831 Query: 715 AHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRS-AKAINFGLIYGMSAFGL 773 A LS+D+ L+ A+ + +D+H TA ++F E S RS AK INF ++YG + FGL Sbjct: 832 AELSKDRHLVQAYQDNQDLHNLTARKIFFKTEEDEISRHERSIAKVINFSILYGKTPFGL 891 Query: 774 ARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNG 833 +++L I +EA +Y+ YFE YP V ++++ AK G+VET G R Y+ I ++N Sbjct: 892 SKELGITVQEASQYITTYFEEYPRVRKFLDIVTETAKLHGFVETFYGTRRYISGINATNK 951 Query: 834 ARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDV 893 +A A R A+N +QGTAA+IIK+ MI + + ++ ++M++QVHDEL+FEV + Sbjct: 952 NVQAQAVRMAVNTVVQGTAANIIKKVMIELHEEFKNDE-NIKMLLQVHDELIFEVRDEFA 1010 Query: 894 DAVAKQIHQLMENCTRL-DVPLLVEVGSGENW 924 ++I ++MEN + VPL +NW Sbjct: 1011 KEYMEKIEKIMENTVKFKKVPLKANGSVAKNW 1042 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 111/329 (33%), Positives = 175/329 (53%), Gaps = 29/329 (8%) Query: 10 ILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKTF 69 +++D S+ +YR++ A + NS+G TGA +G +N L S+I +++P + D K Sbjct: 5 VILDTSAIMYRSHFALMGMRNSSGMSTGATFGFINTLESVIREFRPDYLVACLDVK---- 60 Query: 70 RDEL-----FEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 RDEL E YK+HR MP++L QI+ + ++ +P +G EADDVI T A + Sbjct: 61 RDELERTGELETYKAHRESMPEELVMQIDTIMKVLDGYRIPKYKKAGQEADDVIATFATK 120 Query: 125 AEKAGRP---VLISTGDKDMAQLVTP--NITLI-----NTMTNTILGPEEVVNKYGVPPE 174 V + TGDKD+ QLV NI L+ N+ I E+VV GV P+ Sbjct: 121 FSNDADEQIEVFVITGDKDLTQLVDGKINIALLGKGDKNSAFKHIKTDEDVVEYLGVTPD 180 Query: 175 LIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAA 234 I D LMGD SD IPGV G+G K L+ G L+ +Y ++I G Sbjct: 181 KIPDLFGLMGDKSDGIPGVAGIGPKNGVKLITTYGNLEGIYENIDEIKG-------KQKE 233 Query: 235 KLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAG 294 KL +KE A++S +LAT+K ++++E +L+ ++ + LL L+++ FKR++ VE Sbjct: 234 KLLTDKENAFISRELATVKRELDVEYDKNKLKFEEKDFDSLLKLYEELNFKRFSKAVEEE 293 Query: 295 K--WLQAKGAKPAAKPQETSVADEAPEVT 321 K +LQ G + +E V ++ ++T Sbjct: 294 KERFLQ-NGNQKELTEEEKLVLEKNKKIT 321 >UniRef50_C1TPP4 DNA polymerase I n=2 Tax=Synergistaceae RepID=C1TPP4_9BACT Length = 854 Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 178/406 (43%), Positives = 251/406 (61%), Gaps = 10/406 (2%) Query: 518 KHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEE 577 + +G V I+MPLVPVL +E++G+K++ VL + +L RL + ++ AGE Sbjct: 443 ESRGLSEVLYGIDMPLVPVLVSMEKSGIKLEEPVLQDVISDLKERLERIVEEITSAAGES 502 Query: 578 FNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELA-LDYP---LPKVILEYRGL 633 NL+S KQ+ +LFEK G+ P+KKT G ST VLE+LA L P +P ++LE+R L Sbjct: 503 INLNSPKQVGCLLFEKLGLPPVKKTKTGY-STDVTVLEQLAELPEPHNAVPSMLLEHRAL 561 Query: 634 AKLKSTYTDKLPLMIN-PKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQA 692 +K+ S + LPLM + G + +++ T TGRLSS DPNLQN+P E RI+ + Sbjct: 562 SKMSSGFA--LPLMSSVCGDGIIRSTFESDTTGTGRLSSRDPNLQNLPAYGEWSDRIKSS 619 Query: 693 FIAPED-YVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTS 751 I E V+ADYSQ+ELR++AH+S +K L F G+DIH TA+ VFG+ VT Sbjct: 620 LIPREKGRCFVAADYSQVELRVLAHISGEKRLADIFRSGRDIHTETASMVFGVDSSMVTK 679 Query: 752 EQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKE 811 E RRSAK + FGL+YGMSAFGLA++L + R EA + M YF PGV Y+ ++ +A Sbjct: 680 ELRRSAKMVTFGLLYGMSAFGLAKRLGVGRSEADRIMSRYFAALPGVEAYVTKSADEAIA 739 Query: 812 QGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQ 871 +GY ETL GR L ++ + N R R AIN+P+QGTAAD+ K+AMIAV AE Sbjct: 740 KGYTETLFGRIRPLEEVVTGNTRDRGHIRRVAINSPIQGTAADLAKKAMIAVSRSF-AED 798 Query: 872 PRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVE 917 P V M++QVHD +V E ++ + V ++ ++M+N L VPL E Sbjct: 799 PDVSMVLQVHDSIVCECPEERSEEVLAELQEIMKNVASLAVPLETE 844 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 106/264 (40%), Positives = 153/264 (57%), Gaps = 14/264 (5%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 + P++ VDG +RA++A P LT G PT A+ G NML + ++ P +VVFDA Sbjct: 3 EGPIMFVDGHGLAFRAFYAIPELTAPDGTPTNALVGFFNMLSKIKKEWAPQSLSVVFDAP 62 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 GKTFR E+FE YK R P P++ + Q+ L M+ +G+P++ GVEADDVIG ++RE Sbjct: 63 GKTFRHEMFEEYKKGRKPTPEEFKVQLPILKKMLGLLGIPVICRPGVEADDVIGAVSREY 122 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLI----NTMTNTILGPEEVVNKYGVPPELIIDFLA 181 G PVL+ T DKDM Q++ IT+I + E +YG PP + D+LA Sbjct: 123 AYKGTPVLVVTSDKDMLQILDEGITVIRPGKGISSFNRWDAETFQGEYGFPPARMADYLA 182 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 L+GDS DN+PGVPG+G+KTA+ LL G L+ + A + G + KLE+N + Sbjct: 183 LVGDSVDNVPGVPGIGDKTARRLLGKYGDLEGILAHTADLTA----GQRK---KLEENAD 235 Query: 242 VAYLSYQLATIKTDV---ELELTC 262 +A S L T+ D +++L C Sbjct: 236 LARKSLILTTLSVDGAPDDVDLVC 259 >UniRef50_C4FFL7 Putative uncharacterized protein n=2 Tax=Bifidobacterium RepID=C4FFL7_9BIFI Length = 982 Score = 308 bits (789), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 195/516 (37%), Positives = 289/516 (56%), Gaps = 22/516 (4%) Query: 427 ILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTF 486 + A+ G++L FDT L Y++ ++ A R+L I EE K + Sbjct: 472 LFASLGVDLPKPLFDTKLAGYLVQPDFHADTLEQAAARFLD---IHVEE---KTEEATQG 525 Query: 487 NQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGP-------LNVFENIEMPLVPVLSR 539 + A A + TL H + +L + P + + +E+P+ VL Sbjct: 526 LLDLDDGADADADGNQTSTLLQHAAIIAELARALAPQIDQREQFGLLQRMELPVSHVLYG 585 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 +E G K+D + L + + + ++ A + AG NL S KQL +LFE G+KP Sbjct: 586 MESQGAKVDMQRLTSMRDTFAADARQAQEIAWDYAGTTVNLQSPKQLGKVLFEDMGLKPT 645 Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMI-------NPKT 652 K+T G +T+ + L++L Y + + G A L+ T+KL ++ NP Sbjct: 646 KRTKTGGYTTNADALQKLYFTYADDERASGFLG-ALLRHRETNKLKQIVATLIDATNPAD 704 Query: 653 GRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY-VIVSADYSQIEL 711 R+HT++ Q V ATGRLSS DPNLQNIP RN GR IR AF+ E + ++S DYSQ+EL Sbjct: 705 ERIHTTFEQTVAATGRLSSVDPNLQNIPNRNAAGREIRSAFVPGEGFESLMSCDYSQVEL 764 Query: 712 RIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAF 771 RIMAHLS D+ L+ AF G D H+ A+ V G+P++ +T +QR KA+++GL YG+S++ Sbjct: 765 RIMAHLSGDESLIEAFKSGADFHKYVASLVHGVPVDQITPDQRSHVKAMSYGLAYGLSSY 824 Query: 772 GLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSS 831 GLA+QL I EA+ YF + V +++E ++A+++GY ET+ GRR Y P +KS+ Sbjct: 825 GLAQQLKIRPSEAEALKAKYFATFGKVHDFLESCVSEARKRGYTETMFGRRRYFPALKST 884 Query: 832 NGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKD 891 N A R AAERAA+NAP+QG+AADI+K AMI L + R+I+Q+HDELV E+ Sbjct: 885 NRAARDAAERAALNAPIQGSAADIMKIAMIRARRALAEAGMKSRIILQIHDELVVEIAPG 944 Query: 892 DVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 + + V+ + MEN LDVPL V G G +W A Sbjct: 945 EREQVSALVRDAMENAVHLDVPLDVSTGVGADWQLA 980 Score = 168 bits (426), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 112/341 (32%), Positives = 176/341 (51%), Gaps = 19/341 (5%) Query: 9 LILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L++VDG S +RA+ A P + S+G+ T A++G ML +I KP H AV FD KG Sbjct: 13 LLVVDGHSLAFRAFFALPVENFSTSSGQATNAVWGFATMLAQVIDAEKPDHLAVAFDVKG 72 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 TFR+ + YK R P+DL +Q+ + +M+ A+G+ + G E DDVIGTLA E Sbjct: 73 GTFRNTMLPQYKGTRDAAPEDLLSQLPLIQSMLDALGVTYIEKPGYEGDDVIGTLATMGE 132 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLAL 182 +A L+ +GD+D QLV +T++ + + PE V KY V P D AL Sbjct: 133 QAKYKTLVLSGDRDAFQLVDDWVTVLYPGHHFKDLKHMTPEAVFAKYKVTPAQYPDLAAL 192 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 G+++DNIPGVPGVG+ A + G L+ + ++I G + +++ L+Q K Sbjct: 193 RGETADNIPGVPGVGDGFAAKWINQYGSLEGICEHADEIGG---KKGESLRENLDQVK-- 247 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 L+ ++ + D++L +T + L A ++ LF EF T + L+ Sbjct: 248 --LNRKVNALVRDIDLGVTVDDLTFGHFDAAKIDELFTSLEFGSRTKT----RILKTFNG 301 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWI 343 A K ++ + A+ E +A +S Y D +TL AW+ Sbjct: 302 GEAPKLEQNAKAEAGKERSAIEVSDVQYAG--DADTLNAWV 340 >UniRef50_Q2GD93 DNA polymerase I n=2 Tax=Neorickettsia RepID=Q2GD93_NEOSM Length = 829 Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 168/404 (41%), Positives = 254/404 (62%), Gaps = 14/404 (3%) Query: 523 LNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSS 582 L ++ ++ PL+ + +E+NG+ +D + L + S +++ +L E+E K +IAG+ F+L S Sbjct: 415 LTLYYKVDKPLINAIKHMEKNGISLDVEQLLSLSTQISGKLEEIESKIFDIAGKTFSLQS 474 Query: 583 TKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYT 641 KQL +LFE+ I KK G ST EVL L++ Y + +L +R KLK+ Y Sbjct: 475 PKQLGKVLFEEMQIPVQKKLKSGLSSTDNEVLTSLSIQGYEIADYLLSWRHYIKLKTAYI 534 Query: 642 DKLPLMINP--KTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY 699 D L L +NP + R+ T+Y +T TGRLSS++PNLQNIP E IR+ F A E + Sbjct: 535 DPLLLKVNPNEEKHRISTTYSATLTLTGRLSSSNPNLQNIPREKE----IRKIFTAKEGH 590 Query: 700 VIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKA 759 + ADYSQIELRI+A+++ + L A A G D+H TA+++F + +T + R AKA Sbjct: 591 HFLCADYSQIELRILAYIANVERLKCALASGTDLHTLTASQIF--KTDKITPDLRNKAKA 648 Query: 760 INFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLD 819 +NFG++YG++ FGL++QL I ++EA Y+ YF+ YP + YM R QA++ YV+T+ Sbjct: 649 VNFGIVYGITNFGLSKQLAISKEEAASYIQKYFDEYPEIKIYMNHIRNQARKDTYVKTMM 708 Query: 820 GRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQ 879 R+ + +I S+N AER+AINAP+QGTAADII+ AM+ + Q ++ M+MQ Sbjct: 709 NRKCPIQNINSNNRTISLVAERSAINAPIQGTAADIIRTAMVRM---AQEKELLSHMVMQ 765 Query: 880 VHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGEN 923 VHDELVFE+ D + +AK+I ++ME +PLLVE+ G N Sbjct: 766 VHDELVFELETDVIQQLAKKIKRIMEESH--GIPLLVELKHGPN 807 Score = 188 bits (477), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 103/281 (36%), Positives = 162/281 (57%), Gaps = 18/281 (6%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 L+++D ++L+ AY A P LT++ P GA+YG LN+L ++ KP + V D T Sbjct: 5 LMIIDAYNFLFSAYFALPNLTHNEL-PVGAVYGFLNILLKH-LRTKPEYLVVALDHGKST 62 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR+ ++ +YK++RPP+P +L Q L V + L L + G EADDVI TL R+ K+ Sbjct: 63 FRETIYNNYKANRPPVPGNLTPQFALLRECVDVLNLNPLEIEGFEADDVIATLVRKFSKS 122 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSD 188 + I + DKD+ QLV N+ +IN + N I+G EV K+GV P + DFL+L+GD+SD Sbjct: 123 DLKIKILSTDKDLMQLVNENVHVINPIKNRIIGVNEVKEKFGVFPTQMTDFLSLVGDTSD 182 Query: 189 NIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ----NKEVAY 244 NIPGVPG+G KTA LL G ++ +FR + A++++ + + Sbjct: 183 NIPGVPGIGVKTAAKLLNTFGAIE------------NFRLNEISPARIKESLLRHHDQLT 230 Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFK 285 LS +L ++ D+ ++ + + + QQ +LL +KY FK Sbjct: 231 LSKRLVSLVDDINIQCSLDCIRYQQQDGTKLLAFLEKYGFK 271 >UniRef50_D1AV04 DNA polymerase I n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AV04_STRM9 Length = 861 Score = 305 bits (780), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 173/416 (41%), Positives = 261/416 (62%), Gaps = 11/416 (2%) Query: 512 MWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAH 571 ++ DL + + L+++ E VL +E+ G+ I+ ++ EL ++ ++E K + Sbjct: 450 VFMDLLEKENQLDIYLE-EKEFTDVLIYMEKQGIAINQNYFEKYNLELEKKIKDIENKIY 508 Query: 572 EIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELA-LDYPLPKVILEY 630 +GE FN+SS KQL +LFE GI+ +KK G ST EVLE L + +++LEY Sbjct: 509 IESGESFNISSPKQLGEVLFETMGIEGVKKNKRGY-STDAEVLELLRDRGIKIAELLLEY 567 Query: 631 RGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIR 690 R L KLKSTY + PL+ GR+HT+Y+Q TATGRLSS++PNLQNIP R EG +IR Sbjct: 568 RELVKLKSTYVE--PLLKLSINGRIHTTYNQTGTATGRLSSSNPNLQNIPTRTYEGTKIR 625 Query: 691 QAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLP-LETV 749 + FIA + +VS DYSQIELR++A +S+D+ L+ A+ D+H TA ++F L E V Sbjct: 626 EGFIASKGMKLVSFDYSQIELRVLAEISKDENLINAYKHNLDLHELTARKIFMLKDDEKV 685 Query: 750 TSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQA 809 + QR AK INF ++YG + FGL+++L I +A+ Y++ YF+ YP V ++ +A Sbjct: 686 SKTQRNIAKVINFSVLYGKTPFGLSKELKITVSDAKLYINTYFKEYPKVRILLDDIIEKA 745 Query: 810 KEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQA 869 K+ GYVET G R Y+ DI SSN + A+R A+N +QGTAA+IIK+ M + + + Sbjct: 746 KKDGYVETKFGTRRYVYDINSSNINIKEQAKRMAVNTVIQGTAANIIKKVMKEI--YDKL 803 Query: 870 EQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRL-DVPLLVEVGSGENW 924 V+M++QVHDEL+FEV ++D++ + ++I +M+N DV L V G+NW Sbjct: 804 CNDNVKMLLQVHDELIFEV-REDIN-IFEEIRDIMQNTIVFDDVVLKVNGSEGDNW 857 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 92/286 (32%), Positives = 160/286 (55%), Gaps = 16/286 (5%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK-GK 67 ++++D S+ +YRAY A NS GEP GAM G + L + + P + D K + Sbjct: 4 ILILDTSAIMYRAYFALMNFRNSNGEPVGAMLGFIKQLELALSYFSPEYVIAAKDVKRAE 63 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 R E+++ YK +R MPD+L Q++ + +++ G+P++ + EADDVI +++++ K Sbjct: 64 LKRREIYKEYKENRSGMPDELVMQLDAIDGILEGYGIPIIKIPSYEADDVIASISKKYSK 123 Query: 128 AGRPVLISTGDKDMAQLVTPNITLI-------NTMTNTILGPEEVVNKYGVPPELIIDFL 180 ++I TGDKD+AQL+ PN ++ N I E+V+ GV I D Sbjct: 124 -DYEIIILTGDKDLAQLINPNTSIALLGKKDENEPYKIIENDEDVIEYLGVKSYQIKDLF 182 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 L+GDSSD IPGV G+G KT L+ +D +YA + I G + K+ +K Sbjct: 183 GLIGDSSDGIPGVLGIGPKTGAKLIAEYDNIDNIYANIDNIKG-------ALQKKIIASK 235 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKR 286 ++AY+S +LAT+ +++++L E ++++ ++L ++ KYE ++ Sbjct: 236 DLAYISRELATVFDELDIDLNIEDAKIKEKDFDKLSEIYLKYELRK 281 >UniRef50_D1Y4U0 DNA polymerase I n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y4U0_9BACT Length = 866 Score = 302 bits (774), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 176/404 (43%), Positives = 240/404 (59%), Gaps = 10/404 (2%) Query: 525 VFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTK 584 V I++PL+P L +ER G+++D + + S EL +L + +K +E AG E NL+S K Sbjct: 464 VMNEIDLPLIPSLIGMERRGIRLDREKMLALSRELERQLNAITEKVYEAAGCEINLNSPK 523 Query: 585 QLQTILFEKQGIKPLKKTPGGAPSTSEEVLEEL----ALDYPLPKVILEYRGLAKLKSTY 640 Q+ +LFEK G+ +KKT G ST VLE+L +P +LEYR L K+ S + Sbjct: 524 QIGELLFEKLGLPVVKKTKTGY-STDVSVLEQLREICGARCEIPGQLLEYRELQKMASGF 582 Query: 641 TDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE-DY 699 L L G +H+++ T TGRLSS DPN+QN+P + G+RIR+ I + + Sbjct: 583 VQPL-LSAAGGDGLIHSTFESLTTGTGRLSSRDPNMQNLPTYSGWGQRIRECLIPSQPGH 641 Query: 700 VIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKA 759 +ADYSQIELR++AHLS D L+ F +DIH TAA +FGLP + VT E RRSAK Sbjct: 642 CFAAADYSQIELRVLAHLSGDPQLIEIFNSDRDIHTETAAMIFGLPADAVTKELRRSAKT 701 Query: 760 INFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLD 819 ++FGLIYGMS FGLA +L R A + MD YF PGV EYME ++ ++ E GY TL Sbjct: 702 VSFGLIYGMSVFGLASRLGTDRNTAFQIMDAYFAALPGVREYMETSKKKSLEFGYTSTLF 761 Query: 820 GRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQ 879 GRR + +I + N + +R AINAP+QGTAADI K AM V A V M++Q Sbjct: 762 GRRRPMDEIATGNQTKD-HQKRVAINAPIQGTAADITKIAMNKVAAHFAGRD--VAMVLQ 818 Query: 880 VHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGEN 923 VHD +V E D + A ++ Q+ME+ L VPL E G + Sbjct: 819 VHDSIVCECPHDQAEQTALELSQVMESAVHLSVPLKTERTVGTS 862 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 89/254 (35%), Positives = 136/254 (53%), Gaps = 11/254 (4%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 ++L+DG +RA++A P L G PT A+ G NM + +P FD K T Sbjct: 8 ILLIDGHGIAFRAFYAIPELNAPDGTPTNALVGFFNMFARVRHDQRPDEIYAAFDMKEPT 67 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR L+ YK+ R P P++ + Q+ LH M+ +G+ ++ VEADD+IG+ A + Sbjct: 68 FRHRLYPEYKATRRPTPEEFKIQVPLLHEMLPLLGVHIMERPSVEADDLIGSAAVQFASR 127 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNTILGPE----EVVNKYGVPPELIIDFLALMG 184 G VLI T DKD+ Q++ P + ++ E KYG PP+ ++D+L+LMG Sbjct: 128 GDEVLILTSDKDIMQVLRPGVKILRPGKGVSSFEEYDVPHFTEKYGFPPDTMVDYLSLMG 187 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 DS DNIPGVPGVGEKTA LLQ G ++ + ++ + K+E++ A Sbjct: 188 DSIDNIPGVPGVGEKTASKLLQSYGSIEGIMEHAGEL-------KPALQKKIEEHGAQAV 240 Query: 245 LSYQLATIKTDVEL 258 + +L +K D +L Sbjct: 241 ANRKLTRLKCDEDL 254 >UniRef50_A5D075 DNA polymerase I-3'-5' exonuclease and polymerase domains n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D075_PELTS Length = 751 Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 208/645 (32%), Positives = 320/645 (49%), Gaps = 69/645 (10%) Query: 328 DNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAI-EPGVAAYIPVA 386 DNY I E+ KA +A L P FAFDTET +D +VG+S + G YIPVA Sbjct: 115 DNYRLIQTEDQFKALLADLRHEPAFAFDTETTGVDVYQDVIVGVSLTLPRAGYHVYIPVA 174 Query: 387 HDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLES 446 H+ +A Q+ R L LK L D KV N K+D +L +G+ +RG+A DTM+ Sbjct: 175 HN--NAGPQLRRSYVLNGLKRYLTDPTVGKVLHNAKFDIHMLLRHGMRMRGLAHDTMIAM 232 Query: 447 YILNSVAGRHDMDSLAERWLKH-----KTITFEEIAGKGKNQLTFNQIALEEAGRYAAED 501 ILN + +LA R+ K ++ TFE++ GK F + L+ A YAA+D Sbjct: 233 KILNENEPSVALKNLATRYGKFFGFDGESHTFEDLFGKA----CFADVPLDMALIYAAKD 288 Query: 502 ADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTL 561 +T +L+ L K + L ++ +E PLV + +E+ G +D + EEL Sbjct: 289 THLTWELYKWQMEHLTKREDLLKLYRELENPLVDICVEMEQTGFAVDTAFAQEYGEELKG 348 Query: 562 RLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDY 621 LAE+EK GE N +S QL +L+++ G+ G ST + L+ L + Sbjct: 349 ELAEVEKTLVAHFGE-INFNSPAQLAEVLYDRLGL-----PQGKERSTDVKTLKGLKGRH 402 Query: 622 PLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPV 681 P + +L+YR L KL TY + LP + GR+H S++Q T TGR +S +PNLQN+P Sbjct: 403 PGIEPLLKYRELTKLLGTYVEALPHQLKA-DGRIHGSFNQVATVTGRFASREPNLQNLPP 461 Query: 682 RNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEV 741 R R+ +AP+ ++++ D+SQIE RI+AH+S D + +G+D++ AA V Sbjct: 462 R------ARRLIVAPKGWLLLGIDFSQIEPRILAHMSGDPHFREPYLKGEDLYSTLAARV 515 Query: 742 FGLPLETV--TSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVL 799 F +PL S+ R+ K ++YG S F L+ QL I +EA ++++ +++ YP V Sbjct: 516 FKVPLSECGDGSKYRKMMKIGLLAVMYGTSMFTLSEQLGISVEEAHRFIEGFYDEYPDVY 575 Query: 800 EYMERTRAQAKEQGYVETLDGRRLYLP--------------------------------- 826 +++ T K+ YV TL GR+ P Sbjct: 576 AFIKDTWEFVKKNEYVATLYGRKRRFPGHREQAIVYDQLAAKICKALGTERVPLDFWSNK 635 Query: 827 ----DIKSSNGARRAAAERA---AINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQ 879 D+K GA + ER A+NA +QGTAADI+KRA++ + + +A ++ Sbjct: 636 GIPKDLKRKFGAVKGEVERVRRMAVNARIQGTAADIMKRALLNLYEYTRARGWKINGT-- 693 Query: 880 VHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 VHDE + V A +++ M L+VP+ V+ W Sbjct: 694 VHDEALLLVRDTITLAEVEELEACMVRAAELEVPVKVDTEIMARW 738 >UniRef50_D1B5M0 DNA polymerase I n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B5M0_THEAS Length = 836 Score = 286 bits (733), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 166/407 (40%), Positives = 243/407 (59%), Gaps = 10/407 (2%) Query: 520 KGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFN 579 +G + ++ PL VL +ER G+ +D + L E L L LE+ AG + N Sbjct: 429 EGVRELVTRVDHPLSAVLVDMEREGIGLDVEGLRGLRERLERALGALEEGIAREAGAQVN 488 Query: 580 LSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELA-LDYPL---PKVILEYRGLAK 635 L S KQ+ +LFE+ G+ P+K+T G ST VLEEL+ L PL P +ILE+R ++K Sbjct: 489 LQSPKQVAWLLFERLGLPPVKRTKTGL-STDVGVLEELSRLPEPLGRVPSMILEHREISK 547 Query: 636 LKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA 695 L + + + P + +G + +++ Q T TGRLSS DPN+QN+P R+ + Sbjct: 548 LITAFVN--PFLEQGSSGVIRSTFDQTGTGTGRLSSRDPNVQNLPQFGHWAVEFRRCLVP 605 Query: 696 PED-YVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQR 754 E+ V VSADYSQIELR++AHLS ++ L+ AF EG D+H TA+ ++G+ + V+ EQR Sbjct: 606 VEEGNVFVSADYSQIELRVLAHLSGEERLIRAFEEGADVHARTASWIYGVDPQAVSPEQR 665 Query: 755 RSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGY 814 R AK +NFGL+YGM A GLA+++ + R EA + M+ YF PGV E+ R QAK +GY Sbjct: 666 RFAKVVNFGLLYGMGAHGLAQRMGVSRSEAAEVMERYFSALPGVREFTRRMVEQAKARGY 725 Query: 815 VETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRV 874 TL GR L ++ + G A +R AIN P+QG+AADI ++AM+ + L Sbjct: 726 AATLMGRVRPLSEVSTVEGRGAGAIDRVAINTPIQGSAADIARKAMVELHRALAGGD--C 783 Query: 875 RMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSG 921 RM++QVHD +V V + VA+ + ++ME L VPL+VEV +G Sbjct: 784 RMVLQVHDSIVCSVPEGMASRVAELMREVMEGAASLSVPLVVEVKTG 830 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 87/245 (35%), Positives = 140/245 (57%), Gaps = 12/245 (4%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 +LVDG +RA++A P L+ G P A+ G LNML ++ +PT A+ FD G Sbjct: 5 FLLVDGHGLAFRAFYALPALSAPDGTPVNAVLGFLNMLYKVLEDQRPTGWAIFFDPPGPV 64 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 R E+ E YK+ R P P + + Q+ + +++A+G P+ G EADDVI A + Sbjct: 65 IRREVLESYKAGRRPTPQEFKVQLPIIIDLLEALGHPVHVREGQEADDVIAATAVNLSGS 124 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPELIIDFLALMG 184 G V++S DKD+ Q+++P++ + + + E + +Y PP L+ D+LAL G Sbjct: 125 GEVVILSA-DKDLLQVISPSVKVCRPVKGVSEFRVYDQEAFLEEYRFPPALMADYLALTG 183 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 DS DNIPGVPG+G+K A+ L+ LG L+++Y +++ + +LE+ +E+A+ Sbjct: 184 DSVDNIPGVPGIGDKGARELVSSLGPLESIYEALDRL-------SPAKRKRLEEGRELAF 236 Query: 245 LSYQL 249 LS QL Sbjct: 237 LSRQL 241 >UniRef50_C3U0N1 Truncated DNA polymerase I n=1 Tax=uncultured bacterium RepID=C3U0N1_9BACT Length = 557 Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 192/534 (35%), Positives = 272/534 (50%), Gaps = 49/534 (9%) Query: 9 LILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L L+D + +YRAY+A P S G T A +G + L LI + KPTH AV FD + Sbjct: 5 LFLLDAMALIYRAYYALIRSPRITSKGRNTNAQFGFTSTLIDLINKEKPTHLAVCFDTEA 64 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 T R F YK++R P+DL + + + ++ A +P++ + G EADDVIGTLA +A Sbjct: 65 ATERHTDFAEYKANRQAAPEDLISALPDIKKIITAFNIPVVELDGYEADDVIGTLAWQAA 124 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLI-----NTMTNTILGPEEVVNKYGVPP-ELIIDFL 180 G V + T DKD QL+ N I IL +++ K+G+ + ++D L Sbjct: 125 DKGYEVFMVTPDKDYGQLLIHNNVFIYKPPYQGGKEDILDAKKICEKWGIERVDQVVDML 184 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 LMGD+ DNIPG+ G+GEKTA LL+ L+ + A + I G + K+ K Sbjct: 185 GLMGDAVDNIPGIAGIGEKTACKLLKEFDNLENILANADNIKG-------AVGEKIRNGK 237 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEF----KRWTADVEAGKW 296 E A +S +LA I TDV ++ E +++ EL LF + EF KR D + + Sbjct: 238 EAALMSKKLARIITDVPVQFHEEDYRLKEWNQPELKELFNELEFKALGKRLLGD-DFSVF 296 Query: 297 LQAKGAKPA------------AKPQETSVADEAPEVTATV-ISYD--------NYVTILD 335 +A A PA +K E + E E T TV ++ D Y I Sbjct: 297 DKAGNATPANGQMDMFGTAVESKSTEENANSETDETTETVGLTADKNLGNTPHTYTLIDT 356 Query: 336 EETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQ 395 EE +K +A+L +FDTET LVGLSF + G YIP P Sbjct: 357 EEKIKQLVAELMAQDEISFDTETTGTYAHDVELVGLSFCYKTGEGYYIPC------PPSA 410 Query: 396 ISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGR 455 + L+ KPL +D +GQN+KYD +L YG+ L G FDTML Y++ GR Sbjct: 411 NETQALLQHFKPLFDDASKKWIGQNVKYDLIVLKWYGVLLAGQFFDTMLAHYLIEP-EGR 469 Query: 456 HDMDSLAERWLKHKTITFEEIAG-KGKNQLTFNQIALEEAGRYAAEDADVTLQL 508 MD L+ ++L+++ + EE+ G KGKNQLT + LE+ YAAEDAD+TLQL Sbjct: 470 RGMDYLSAQYLQYEPVHIEELIGKKGKNQLTMKDVELEKIKEYAAEDADITLQL 523 >UniRef50_C8VXR3 DNA-directed DNA polymerase n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VXR3_DESAS Length = 755 Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 209/647 (32%), Positives = 320/647 (49%), Gaps = 74/647 (11%) Query: 329 NYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAI-EPGVAAYIPVAH 387 NY + EE L + L++ A DTET LD + +VGLSF + + YIPVAH Sbjct: 117 NYRLVQTEEQLDQLVTDLQQEDEIAVDTETTGLDVYNDVIVGLSFTLPKADYHVYIPVAH 176 Query: 388 DYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESY 447 A Q+SR L LKP+L D K+ N KYD +L +G+ LRGI DTM+ Sbjct: 177 KV--AGQQLSRRAVLTALKPILTDVNIGKILHNSKYDIHMLIRHGLRLRGIKHDTMIAMA 234 Query: 448 ILNSVAGRHDMDSLAERWLKH-----KTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDA 502 +LN + +LA ++ K+ K+ T+EE+ GK +F +I L+ A YAA+D Sbjct: 235 VLNENEPTLALKNLATKYGKYFGFEDKSYTYEELFGKT----SFAEIPLDAALVYAAKDT 290 Query: 503 DVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLR 562 +T +L+ L + + +++ +E PL+ V +E+ G ID + EL Sbjct: 291 HLTYELYKWQRQHLNQKESLRLIYDELENPLIDVCVDMEQAGFLIDMDFAMEYKAELKGE 350 Query: 563 LAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEEL--ALD 620 +A LE E G+ N +S QL +L++K + +K G ST + L++L Sbjct: 351 IAGLEANLTEHFGD-INFNSPLQLAAVLYDKLKLPVIK---GKERSTDVKTLKKLRDETK 406 Query: 621 YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIP 680 + V+L+YR L KL TY + LP +I K G +H S++Q T TGR +S +PNLQN+P Sbjct: 407 HEGIDVLLKYRELTKLLGTYVEALPQLIK-KDGLLHGSFNQVATVTGRFASREPNLQNLP 465 Query: 681 VRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAE 740 R R+ +APED +I+ D+SQIE R++AH+S D L + +G+D++ A+ Sbjct: 466 PR------ARRLIVAPEDSLILGVDFSQIEPRVLAHMSGDPHLQEPYLKGQDLYSTLASR 519 Query: 741 VFGLPLETV--TSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGV 798 VF + E S+ R+ K ++YG S + LA QL I +EA ++++ +F YP V Sbjct: 520 VFKVSYEECGDDSKYRKMMKVGLLAVMYGTSMWTLADQLGITVEEANQFIEDFFATYPDV 579 Query: 799 LEYMERTRAQAKEQGYVETLDGRRLYLPD------------------------------- 827 ++ T AK+ YVETL GR+ P Sbjct: 580 YAFICATHEFAKQNEYVETLYGRKRRFPGHREKAIVYDKLATEICEILGTKAVPYDYWQY 639 Query: 828 -------IKSSNGARRAAAERA---AINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMI 877 ++ A + ER A+NA +QGTAADI+KRA+I + ++I Sbjct: 640 KKELPVILRRQFRAVKGEVERVRRMAVNARIQGTAADIMKRALINL------YNDGRKII 693 Query: 878 MQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 VHDE + V+K+ A ++I M L+VP+ V+ W Sbjct: 694 GTVHDEALLIVNKNITLAEVEKIEACMIRSANLNVPIRVDTELSTRW 740 >UniRef50_B3RWI3 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3RWI3_TRIAD Length = 1492 Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 165/540 (30%), Positives = 292/540 (54%), Gaps = 40/540 (7%) Query: 409 LEDEKALKVGQNLKYDRGILANY-GIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLK 467 +E+ A+K+ NLK IL + +E++G ++D + ++L+ A ++ +L Sbjct: 963 IENSSAIKIAYNLKEQYKILTRHLQVEIKGTSYDPKIGIWLLDQDAHEKTFHAIISNYLA 1022 Query: 468 HKTITFEEIAGKGK--NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNV 525 + + + G N + + + R A ++ + +LH + + K + + Sbjct: 1023 DEAALLDCVIGTCTDGNGIGLHYNSQTSGRRRACIESVLVHKLH-SVVEAMLKERELYKL 1081 Query: 526 FENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQ 585 + IEMP + L +E +G+ E L RL +E+ A+ IAG F L+S Sbjct: 1082 YSEIEMPTIRTLCWLELDGIGFCMDECQQQIERLQYRLHYIEEMAYRIAGRSFQLTSPTD 1141 Query: 586 LQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKL- 644 + +L+ + +T ++VL++L+ +PLP ++LE+R ++ S T L Sbjct: 1142 IAHVLYTEL-------------NTCKDVLQKLSQIHPLPALVLEWR---RINSALTKTLY 1185 Query: 645 PL------MINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGR--RIRQAFIAP 696 PL KT RV+ + Q TATGR+S +DPNLQNIP + + R+R Sbjct: 1186 PLKRYSKYCHKSKTYRVYPTC-QMHTATGRISISDPNLQNIPKDFDIAKMVRMRNIIGCT 1244 Query: 697 EDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRS 756 D +++SADYSQ+ELR++AHLS DK L +G D+ +A A+E +P + V+ EQR+ Sbjct: 1245 NDTILLSADYSQLELRLIAHLSEDKQLSRVLNDGGDVFKAIASEWLCIPTDHVSDEQRQR 1304 Query: 757 AKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVE 816 AK + +G+IYGM+ L Q+ +P ++A +M + RY G+ +++E+T + +GYV Sbjct: 1305 AKQMCYGIIYGMTPMALGEQMKVPEEQAATFMHTFKSRYNGIAKFIEKTLVSCRREGYVS 1364 Query: 817 TLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWL--------- 867 T+ R+ LP+I+S+N R+ AER AIN +QG+AAD++K AMI + + Sbjct: 1365 TIMNRKRLLPNIRSTNARLRSHAERQAINTTVQGSAADLVKIAMINIHKRIDEMCANRAN 1424 Query: 868 -QAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 + + + ++Q+HDEL+FE+ +++++V+ + Q MEN +L V L V++ +G+ W + Sbjct: 1425 RDNAEWKPKFVLQMHDELLFEIKANELESVSLIVKQEMENALKLRVKLEVKIKTGKYWGE 1484 >UniRef50_A3DFZ4 DNA-directed DNA polymerase n=3 Tax=Clostridium RepID=A3DFZ4_CLOTH Length = 640 Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 199/634 (31%), Positives = 313/634 (49%), Gaps = 68/634 (10%) Query: 346 LEKAPVFAFDTETD-----------SLDNISANLVGLSFAIEPGVAAYIPVAH-DYLDAP 393 L+ +FAFD ET +LD A++ G+SF++ G A Y+P+ H +A Sbjct: 16 LKNTVLFAFDFETSPRDKWRNDKSAALDAHKADITGISFSVSEGTAIYVPLKHRSGRNAE 75 Query: 394 DQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVA 453 +Q + + LK L E + +KV NL ++ L GI L+ +DT+ S + ++ Sbjct: 76 NQAA---IWDYLKLLFESKDVIKVAHNLAFESMFLYARGIVLQKPCYDTIAASQL--TLK 130 Query: 454 GRHDMDSLAERWLKH--------KTITFEEIA-GKGKNQLTFNQIALEEAGRYAAEDADV 504 + + SLA+ LK + F + G+ ++L E+ RYA D+D Sbjct: 131 SKWEFRSLADSGLKTLAPALCKAEMTEFSTVTEGRFFDELNPQD---EKTVRYACADSDY 187 Query: 505 TLQLH--LKMWPD--LQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELT 560 TL+L+ W D L KH+ + E +E P + ++ NG+ +D + E Sbjct: 188 TLRLYHVFNQWFDRFLPKHR---TIVEEVESPTSVYVGIMKYNGILVDKSAMLKKQAEAA 244 Query: 561 LRLAELEKKAHEIAGEEFNL-----SSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVL- 614 ++ + K EIAG N+ +ST + LF G+ +K T + +E + Sbjct: 245 EKIVSIRK---EIAGIIGNVEIGANASTSAFKKYLFVDLGLPVMKTTAKHQEAADDETMI 301 Query: 615 ---EELALDYP----LPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATG 667 E A + P L +++ EYR KLKSTY D I+ TGR+H T TG Sbjct: 302 LLKEWCATNRPELVRLFELVQEYRKWGKLKSTYIDGYLRFIDEDTGRIHPDLMPLGTETG 361 Query: 668 RLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAF 727 R +S +PN+QN P ++ + +R+ IAP V++S D+SQIELR+ A RDK +L + Sbjct: 362 RFASRNPNMQNCPQKDNDPIGVRKFIIAPAGKVLLSLDFSQIELRVGAFYCRDKRMLETY 421 Query: 728 AEGKDIHRATAAEVFGLPLETVT-------SEQRRSAKAINFGLIYGMSAFGLARQL--- 777 G DIH T + ++ +P E E+R AK NFG+ YG+ GL R L Sbjct: 422 RTGGDIHAQTTSVIYRIPFEEAADKNAPHYKERRTIAKNCNFGVFYGLFPTGLQRTLKFK 481 Query: 778 ---NIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGA 834 N E + + YPG+ ++ + + +A Y ET GRR YL I+SS+ Sbjct: 482 AGINPTLAECETIIQNLKSGYPGLAKWQDEVKKRAAVSCYSETWLGRRRYLLGIRSSDWG 541 Query: 835 RRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVD 894 +++ AER A+N P+QGTAADI+K A + + L E+ ++ ++Q+HDELVFE+ +D VD Sbjct: 542 KKSFAERCALNTPIQGTAADILKLACGRIISGL-PERLWLKPMLQIHDELVFELPEDKVD 600 Query: 895 AVAKQIHQLMEN--CTRLDVPLLVEVGSGENWDQ 926 I + ME DVP++ E G N+ + Sbjct: 601 EAVVFIKECMETQPFPAFDVPIVAEASVGRNFGE 634 >UniRef50_B0TCV6 DNA polymerase i n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TCV6_HELMI Length = 645 Score = 265 bits (677), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 202/645 (31%), Positives = 322/645 (49%), Gaps = 70/645 (10%) Query: 330 YVTILDEETLKAWIAKLEKAPVFAFDTETD-----------SLDNISANLVGLSFAIEPG 378 Y + D L+ + L+KA + AFD ET +LD A++ G+SF++ G Sbjct: 3 YKCVTDLTELRDY---LDKAGLIAFDFETAPREKYRRDEKAALDAHKADIAGVSFSVSEG 59 Query: 379 VAAYIPVAHDY---LDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIEL 435 A Y+P+ H +PD+I + L + + + K +K+ NL ++ L G+ L Sbjct: 60 TAVYVPLKHKTGKNAGSPDKIMQW----LSENVFANRKVVKIAHNLSFEAMFLYALGVVL 115 Query: 436 RGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTI--------TFEEI-AGKGKNQLTF 486 + +DT+ + L ++ +LA+ LK T +FE + AG+ ++L Sbjct: 116 QPPCYDTIAAA--LMTLKSNTAFRTLADSGLKTLTQELFGVDLPSFETVTAGRYFDELDP 173 Query: 487 NQIALEEAGRYAAEDADVTLQLH--LKMWPD--LQKHKGPLNVFENIEMPLVPVLSRIER 542 EE RYA D+D TL+L+ W + L KH+ + E +E P ++ Sbjct: 174 QD---EETVRYACADSDYTLRLYHLFNNWFNRYLPKHRF---IVEKLESPAAVYCGLMKY 227 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNL---SSTKQLQTILFEKQGIKPL 599 NG+ D +++ E +LAEL + G+ N+ +ST + L++ + Sbjct: 228 NGLLADEELMLKKQAEAEGKLAELRGNIAFLIGD-VNIGANASTSAFKKYLYDDLKLPVF 286 Query: 600 KKTPGGAPSTSEEVL----EELALDYP----LPKVILEYRGLAKLKSTYTDKLPLMINPK 651 K T + +E + E + P L +++ EYR K+KSTY D IN Sbjct: 287 KTTAKYQEAMDDEAMILLSEWCRENRPELAELFELVQEYRRWGKIKSTYIDGYLEYINSV 346 Query: 652 TGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIEL 711 TGR+H T TGR ++ +PNLQN P ++ + +R FIAP+ ++S D+SQIEL Sbjct: 347 TGRIHPDMFPLGTETGRFAARNPNLQNCPRKDNDPVGVRNFFIAPKGKALLSLDFSQIEL 406 Query: 712 RIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVT-------SEQRRSAKAINFGL 764 R+ A RD+ +L + G DIH T + ++ +P E E+R AK NFG+ Sbjct: 407 RVGAFYCRDERMLETYRTGGDIHAQTTSVIYRIPFEEAADKSAQHYKERRAIAKNCNFGV 466 Query: 765 IYGMSAFGLARQ------LNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETL 818 YG+ GL R L+ P E ++ + YP ++++ E+T+ +A + Y ET Sbjct: 467 FYGLFPKGLHRNLKFKAGLDTPLSECERIIANLKAGYPRLVQWQEKTKKRAASRRYTETW 526 Query: 819 DGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIM 878 GRR YLPDI SS+ +++ AER A+N P+QGTAADI+K A+ + L ++ R+R ++ Sbjct: 527 LGRRRYLPDIASSDWGKKSFAERCALNTPIQGTAADILKLALGRIIEGL-PQRMRLRPVL 585 Query: 879 QVHDELVFEVHKDDVDAVAKQIHQLMEN--CTRLDVPLLVEVGSG 921 Q+HDELVFEV +D V A I ME DVP++ E G Sbjct: 586 QIHDELVFEVPEDKVHEAAVFIKSCMEERPFEEFDVPIVAEAAFG 630 >UniRef50_B4AHF3 DNA polymerase I n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AHF3_BACPU Length = 744 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 197/574 (34%), Positives = 302/574 (52%), Gaps = 34/574 (5%) Query: 328 DNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVG-LSFAIEPGVAAYIPVA 386 +NY I DE+ L ++A LE FD ET +D + +VG + AI+ V AYIP Sbjct: 113 ENYWLITDEKRLAEFVALLENEEEIVFDVETTGVDVWNDYIVGHVITAIKADVHAYIPTR 172 Query: 387 HDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLES 446 H + P Q+SR+ E L+P ED K+ N K+D +L GI+LRG+ +DT Sbjct: 173 HKTI-LP-QLSRDLVNETLRPFYEDPTVGKLAHNAKFDIHMLDREGIKLRGLTWDTQEAM 230 Query: 447 YILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIA-LEEAGRYAAEDADVT 505 +LN + +L ++L+ ++ T+ ++ GK + F+++ LE A YAA+D DVT Sbjct: 231 RLLNENEPSFALKNLVTKYLRIESSTYGDLFGK----IGFDEVDDLEIALAYAAKDGDVT 286 Query: 506 LQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAE 565 L+L L K L +E +E+PL+ V+ ++E G ID + EL L Sbjct: 287 LKLRNFQREHLAKMPEVLRYYETVEVPLISVVQQMETTGFDIDLDYAEEYGRELKSGLDR 346 Query: 566 LEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPK 625 L + E G+ N++S QL+ L G A + +++VL+ LA YP+ K Sbjct: 347 LYDELIEELGD-VNINSPAQLKPALERVTG-------ESLASTDAKKVLKPLAKKYPVVK 398 Query: 626 VILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSS--TDPNLQNIPVRN 683 +LEY+ KL STY + LP +I+ KTG+++T+++ TGR SS T NLQN P Sbjct: 399 KLLEYKDSFKLYSTYINALPELIDQKTGKLYTNFNPNGAKTGRFSSGGTGVNLQNQP--- 455 Query: 684 EEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFG 743 ++ R+ F+APE Y I+ D+SQ E R +A+ ++D L+ + G D++ + AAEVFG Sbjct: 456 ---KKARKLFVAPEGYAILGGDWSQQEYRCLAYFTQDPKLVDNYFRGDDLYASIAAEVFG 512 Query: 744 LPLETV--TSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEY 801 P+E S R+ AK I + YG A L + + + EAQK++D +FER+P V E+ Sbjct: 513 KPIEECGDGSVYRKQAKVIMLAVAYGGGANMLKDAIGVEKHEAQKFLDSFFERFPVVKEW 572 Query: 802 MERTRAQAKEQGYVETLD--GRRLYLPDIKS-SNGARRAAAERAAINAPMQGTAADIIKR 858 +E + K+ G+V +D R+ LPD K S +A + NA +QG+AA K Sbjct: 573 VESNQKFVKKHGFV-WMDHLQRKRRLPDAKDRSAKGHYSAVFTQSTNARVQGSAAIQTKA 631 Query: 859 AMIA----VDAWLQAEQPRVRMIMQVHDELVFEV 888 MIA D + R+ VHDE + V Sbjct: 632 TMIALQELCDRKTAEGRGEWRLWCVVHDEALLLV 665 >UniRef50_Q89AD1 5'-3' exonuclease n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=EX53_BUCBP Length = 302 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 134/289 (46%), Positives = 199/289 (68%) Query: 10 ILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKTF 69 +L+DG+SYLYRAY+AF N+ +P GA+YG+LNMLRS++++Y ++ V+FD+ KTF Sbjct: 11 LLIDGTSYLYRAYYAFLKFKNNFNKPCGAIYGMLNMLRSMLLKYPYSNIVVIFDSPQKTF 70 Query: 70 RDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKAG 129 R+ELF YK +RP MP+DL+ QI P+H ++K +G+P++++ VEADD+IGTLA + K Sbjct: 71 RNELFIPYKKNRPKMPNDLKEQILPIHHIIKHIGIPIISIPHVEADDIIGTLATKLYKKK 130 Query: 130 RPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSDN 189 +LIST DKD+AQLV +I ++ +N +L +V KYG+ P+LI D L LMGD+SDN Sbjct: 131 YFILISTNDKDLAQLVNIHIHVLIGTSNIVLDESKVKKKYGIIPKLIPDLLGLMGDNSDN 190 Query: 190 IPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQL 249 IPGVP VG+KTA LL+ G L+ +Y EKI + AKT+ L K++A+LS +L Sbjct: 191 IPGVPTVGKKTALILLKTFGSLENIYNNIEKIPKCLIKKAKTIYNNLHTYKKLAFLSQKL 250 Query: 250 ATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 ATIKTD+ + +T +++++ P E+ F Y+F W ++ G WL+ Sbjct: 251 ATIKTDINVNITTKKIKMLPPCTTEISNFFLHYKFYNWNKLLKQGLWLK 299 >UniRef50_P30314 DNA polymerase n=4 Tax=Caudovirales RepID=DPOL_BPSP1 Length = 924 Score = 256 bits (654), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 188/635 (29%), Positives = 310/635 (48%), Gaps = 82/635 (12%) Query: 368 LVGLSFAIEPGVAAYIPVAH-DYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYD-R 425 +VG+ + G IP+ H + L +QI ++ L+ LLE E + N K+D R Sbjct: 243 IVGIGLSDRSGYGCAIPLYHRENLMKGNQIGT--IVKFLRKLLEREDLEFIAHNGKFDIR 300 Query: 426 GILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAER--WLKHKTITFEEIAG----K 479 + A+ I L +DTML ++ + R + S ++R WL+ +++ K Sbjct: 301 WLRASLDIYLDISIWDTML----IHIIDYRGERYSWSKRLAWLETDMGGYDDALDGEKPK 356 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 G+++ ++ I + Y A+D DVT +L K P +++++ ++ENI +P L Sbjct: 357 GEDEGNYDLIPWDILKVYLADDCDVTFRLSEKYIPLVEENEEKKWLWENIMVPGYYTLLD 416 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEI-------------------------- 573 IE +G+ +D + L ++ LE K E Sbjct: 417 IEMDGIHVDREWLEVLRVSYEKEISRLEDKMREFPEGVAMEREMRDKWKERVMIGNIKSA 476 Query: 574 --------------------AGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEV 613 G++ N STKQL +LFE+ G++ + T GAPST+++ Sbjct: 477 NRTPEQQDKFKKYKKYDPSKGGDKINFGSTKQLGELLFERMGLETVIFTDKGAPSTNDDS 536 Query: 614 LEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTD 673 L+ + KV++E+R L + + KL LMI+P VH SY+ T TGRLSS + Sbjct: 537 LKFMGSQSDFVKVLMEFRKANHLYNNFVSKLSLMIDPDN-IVHPSYNIHGTVTGRLSSNE 595 Query: 674 PNLQ------NIPVRNEEGRRIRQAFIA--PEDYVIVSADYSQIELRIMAHLSRDKGLLT 725 PN Q N P + I++ F + + VIV DYSQ+ELRI+ + Sbjct: 596 PNAQQFPRKVNTPTLFQYNFEIKKMFNSRFGDGGVIVQFDYSQLELRILVCYYSRPYTID 655 Query: 726 AFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQL-----NIP 780 + G D+H+A A++ FG+ +E V+ +QR ++K I FG++Y SA GL+ L + Sbjct: 656 LYRSGADLHKAVASDAFGVAIEEVSKDQRTASKKIQFGIVYQESARGLSEDLRAEGITMS 715 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 E + ++ YF+R+P V +++ T+ K+ V+TL G LPDI S + ++ AE Sbjct: 716 EDECEIFIKKYFKRFPKVSKWIRDTKKHVKDISTVKTLTGATRNLPDIDSIDQSKANEAE 775 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 R A+N P+QGT +D ++I ++ WL+ R R+ + VHD +V + KD+V VAK++ Sbjct: 776 RQAVNTPIQGTGSDCTLMSLILINQWLRESGLRSRICITVHDSIVLDCPKDEVLEVAKKV 835 Query: 901 HQLMENCTRL--------DVPLLVEVGSGENWDQA 927 +MEN DVP+L E+ G N+ A Sbjct: 836 KHIMENLGEYNEFYKFLGDVPILSEMEIGRNYGDA 870 >UniRef50_C3ZGQ2 DNA polymerase I n=1 Tax=Branchiostoma floridae RepID=C3ZGQ2_BRAFL Length = 595 Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 168/498 (33%), Positives = 266/498 (53%), Gaps = 74/498 (14%) Query: 498 AAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSE 557 AA + T L +K+ L + +G F N+EMP + L+R+E NG +P+ + Sbjct: 97 AALECVFTFHLMVKL-SKLLEEQGLSTAFRNVEMPSLVALARLELNGAGFNPEECETQCQ 155 Query: 558 ELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIK-----PLKKTPGGAPSTSEE 612 + RL LE++AH++AG F L+STK + +L+E++ ++ P STS + Sbjct: 156 VMKDRLRMLEERAHKLAGHTFALNSTKAVDKVLYEEKKLEINEDPSTNSQPQERLSTSRK 215 Query: 613 -VLEELALDYPL---PKVILEYRGLAKLKSTYTDKLPL----MINPKTG--RVHTSYHQA 662 VLE+L +PL P VIL+++ ++ L + T PL + NP+ R++++ + Sbjct: 216 GVLEKLKTSHPLHPLPGVILKWKHISNLLNKVT---PLQKKNVYNPRLNMDRIYSTCNLH 272 Query: 663 VTATGRLSSTDPNLQNIP----------VRNEEG-----------RRI--RQAFIAPEDY 699 TATGR++ DPNLQ IP NE+G R++ R AFI + Sbjct: 273 -TATGRVAFHDPNLQFIPKEFEIEMPTDTNNEDGPPAAGEETMSKRKVCMRHAFIPFKGG 331 Query: 700 VIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKA 759 VI++ADYSQ+E+RIMAHLS+D L A G+D+ +A A++ G+ +E V+ + R+ AK Sbjct: 332 VILAADYSQLEVRIMAHLSKDSKLTQALNSGQDVFKAIASQWKGVAVEHVSDKLRQQAKQ 391 Query: 760 INFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLD 819 + +G+IYGM L +L + ++E ++ ++ + Y G+ Y + T Q K GYV+T+ Sbjct: 392 LYYGIIYGMGPKTLGEKLGVSKEEGKRRIETFKSSYTGIQRYRQTTVDQCKRNGYVQTMA 451 Query: 820 GRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVR---- 875 RR YLPDI + + + AER A N +QG+AAD++K+AM+ +D LQ E P R Sbjct: 452 ERRRYLPDINGEDYYKLSQAERQAFNTTIQGSAADLVKKAMVLIDQRLQQEFPDTRRSHR 511 Query: 876 ---------------------------MIMQVHDELVFEVHKDDVDAVAKQIHQLMENCT 908 +I+Q+HDEL++EVH++D VA+ + ME Sbjct: 512 HGESTAAAADTDKRRSQQPSSPPRGAYLILQLHDELIYEVHEEDEQKVAQIVKHKMEKAM 571 Query: 909 RLDVPLLVEVGSGENWDQ 926 L V L V+V G W Q Sbjct: 572 ELSVELPVKVKVGPTWGQ 589 >UniRef50_Q8K9D0 5'-3' exonuclease n=4 Tax=Buchnera aphidicola RepID=EX53_BUCAP Length = 287 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 123/280 (43%), Positives = 186/280 (66%), Gaps = 1/280 (0%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQ-YKPTHAAVVFDA 64 + P+I+VDGS YLYR+Y F ++ P+GA+YG+L +++++ + Y ++FD+ Sbjct: 6 KKPIIIVDGSLYLYRSYFTFQNFNSNEENPSGAIYGMLKTIQNILNKNYNSKKIIIIFDS 65 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 K FR+ +F+ YKS+R MP+ L QI+PL +++ +G+ L++ G+EADD+IG+LA + Sbjct: 66 SKKNFRNTIFKEYKSNRSAMPNKLYVQIQPLFKILEEIGIKTLSILGIEADDIIGSLAYK 125 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMG 184 E+ G VLI + DKDM QL+T NI ++N N+IL PE++ KYG+ P+ ID LALMG Sbjct: 126 LEQKGEQVLIVSHDKDMIQLITDNINVLNISKNSILTPEKIQEKYGIYPKEFIDLLALMG 185 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 DSSDNIPGVP +G KTA LL+ + +Y EKI L FR AK A +L+ K+ A+ Sbjct: 186 DSSDNIPGVPKIGIKTALFLLKKFSNIKNIYNNIEKIQSLPFRNAKNAAIQLKNYKKTAF 245 Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEF 284 LSYQLA IK DV + +T E++ +++ ++L L + Y F Sbjct: 246 LSYQLAKIKLDVPINITSEEITLKKTCFKKLSNLIRWYSF 285 >UniRef50_C3YL74 Putative uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae RepID=C3YL74_BRAFL Length = 2215 Score = 248 bits (633), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 189/636 (29%), Positives = 302/636 (47%), Gaps = 113/636 (17%) Query: 394 DQISRERALELLKPLLE--DEKALKVGQNLKYDRGILA-NYGIELRGIAFDTMLESYILN 450 D++ E L +K +LE D + +V +LK LA GI + G D + ++L+ Sbjct: 1580 DRLPVEERLHNIKSVLEKGDVCSSQVLFDLKPQYKALALGCGITMNGDFEDPKVADWLLD 1639 Query: 451 SVAGRHDMDSLAERWLKHKTITFEEIAGK-GKNQLTFNQIALEEAGRYAAEDADVTLQLH 509 A +R+ ++ + + G G L + +GR A + L H Sbjct: 1640 PGAKVKSFHGTVQRFTPQESYLLQGLGGCFGVGSLAMT-VQNSGSGRMRAA-LECVLTFH 1697 Query: 510 LKMWPD-LQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEK 568 + D L + +G F ++EMP + L+R+E NG P + + +L LE+ Sbjct: 1698 MMEELDKLLEAQGLSTAFRDVEMPSLVTLARMELNGAGFSPVECETQCQIMQAKLRMLEE 1757 Query: 569 KAHEIAGEEFNLSSTKQLQTILF---------------------------EKQGIKPLKK 601 +A+++AG F L+S + +LF +G KPLK Sbjct: 1758 QAYQLAGHTFALTSPDDIAQVLFLELKLPANGDPSSTTNPQPRKTLGTARPARGRKPLKH 1817 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILEYRGLAK--LKSTYTDKLPLMINPKTG--RVHT 657 STS++VLE+L + LP VILE+R ++ K + + + NP+ R++ Sbjct: 1818 L-----STSKDVLEKLKKFHALPGVILEWRRISNSLTKVVFPLQKEKVYNPRLNMDRIYG 1872 Query: 658 SYHQAVTATGRLSSTDPNLQNIP-------------------------------VRNEEG 686 + TATGR++ DPNLQNIP VR +G Sbjct: 1873 NC-DLHTATGRVTFHDPNLQNIPKDFEIEMPTIIGDSPPPGCGETVSKRKGRKVVRRTDG 1931 Query: 687 RRI-------------RQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDI 733 RR+ R AFI + V+++ADYSQ+ELRI+AHLS+D L G+D+ Sbjct: 1932 RRVESDGAGQAFSVSLRHAFIPFQGGVLLAADYSQLELRIIAHLSQDSKLTQVLNSGQDV 1991 Query: 734 HRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFE 793 +A A++ G+ +E V+ + R+ AK + +G+IYG+ A L QL + +E +++ + Sbjct: 1992 FKAIASQWKGVAMEDVSDKLRQQAKQLCYGMIYGIGAKALGEQLGVDEEEGACFIETFKS 2051 Query: 794 RYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAA 853 +Y G+ Y+ T Q K+ G+V+T+ GRR YLP I N R AER A+N +QG+AA Sbjct: 2052 KYTGMRRYLHTTVDQCKKDGFVQTMAGRRRYLPGITEGNHHVRCHAERQAVNTTVQGSAA 2111 Query: 854 DIIKRAMIAVDAWLQAEQPRVR-------------------------MIMQVHDELVFEV 888 D++K+AM+++D LQ P R +I+Q+HDEL++EV Sbjct: 2112 DLVKKAMVSIDQKLQKLFPATRRSHRQDTQKRSRRSQQPSSPPRGAYLILQLHDELIYEV 2171 Query: 889 HKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 ++DV VA+ + MEN +L V L V+V G W Sbjct: 2172 RREDVQQVAQIVKHEMENAVKLSVVLPVKVKVGPTW 2207 >UniRef50_Q7Z5Q5 DNA polymerase nu n=15 Tax=Amniota RepID=DPOLN_HUMAN Length = 900 Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 162/519 (31%), Positives = 273/519 (52%), Gaps = 43/519 (8%) Query: 438 IAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRY 497 I D + +++++ + L E++ + K+IT K T+ + + Sbjct: 345 IGLDPRIAAWLIDPSDATPSFEDLVEKYCE-KSITV-------KVNSTYGNSSRNIVNQN 396 Query: 498 AAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSE 557 E+ +L + + L+ + G +F +E+PL+P+L+ +E + ++++ + + S Sbjct: 397 VRENLKTLYRLTMDLCSKLKDY-GLWQLFRTLELPLIPILAVMESHAIQVNKEEMEKTSA 455 Query: 558 ELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPG-------GAPSTS 610 L RL ELE++AH +AGE F ++S QL+ ILF K + L + PSTS Sbjct: 456 LLGARLKELEQEAHFVAGERFLITSNNQLREILFGKLKLHLLSQRNSLPRTGLQKYPSTS 515 Query: 611 EEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLS 670 E VL L +PLPK+ILEYR + K+KST+ D L + K G + ++++Q T TGRLS Sbjct: 516 EAVLNALRDLHPLPKIILEYRQVHKIKSTFVDGL--LACMKKGSISSTWNQTGTVTGRLS 573 Query: 671 STDPNLQNI---PV-----RNEEGRR-------IRQAFIAPEDYVIVSADYSQIELRIMA 715 + PN+Q I P+ +N +G+ R F++ + + ++AD+SQIELRI+ Sbjct: 574 AKHPNIQGISKHPIQITTPKNFKGKEDKILTISPRAMFVSSKGHTFLAADFSQIELRILT 633 Query: 716 HLSRDKGLLTAFAEGK--DIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGL 773 HLS D LL F E + D+ ++ +P+E VT R K + + ++YG L Sbjct: 634 HLSGDPELLKLFQESERDDVFSTLTSQWKDVPVEQVTHADREQTKKVVYAVVYGAGKERL 693 Query: 774 ARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNG 833 A L +P +EA ++++ + ++Y + ++ AQ + G V ++ GRR LP I + + Sbjct: 694 AACLGVPIQEAAQFLESFLQKYKKIKDFARAAIAQCHQTGCVVSIMGRRRPLPRIHAHDQ 753 Query: 834 ARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQP-RVRMIMQVHDELVFEVHKDD 892 RA AER A+N +QG+AAD+ K AMI V + A R++ Q+HDEL+FEV Sbjct: 754 QLRAQAERQAVNFVVQGSAADLCKLAMIHVFTAVAASHTLTARLVAQIHDELLFEVEDPQ 813 Query: 893 VDAVAKQIHQLMENCT-------RLDVPLLVEVGSGENW 924 + A + + ME+ +L VPL V + +G +W Sbjct: 814 IPECAALVRRTMESLEQVQALELQLQVPLKVSLSAGRSW 852 >UniRef50_Q1ARA6 DNA polymerase I n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ARA6_RUBXD Length = 582 Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 190/541 (35%), Positives = 281/541 (51%), Gaps = 49/541 (9%) Query: 405 LKPLLE--DEKALKVGQNLKYDRG-ILANYGIELRGIAFDTMLESYILNS--VAGRHDMD 459 L PL E + LKV N KYD +LA +GI L + FDTML + +L+ + ++ Sbjct: 68 LSPLREALEGGPLKVLHNAKYDYSFLLAQHGIRLSPL-FDTMLAAQLLDGGEQGPSYSLE 126 Query: 460 SLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKH 519 ++A R+L +E K + +++ E YAA DA + L LH ++ L++ Sbjct: 127 AVAGRYL-------QETVDKTARREDWSKELSREQLEYAARDAAILLPLHERLQELLERE 179 Query: 520 K-GPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEK--KAH----- 571 GP++ IE VP ++ +E G+++D + + R E + ++H Sbjct: 180 GLGPVS---RIEFGAVPAIAEMELAGIRLDVRRWRELERVVRRRRDEAARRLESHFPQPE 236 Query: 572 -----EIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKV 626 E G NL+S +Q+ F GI+ P T L L +D+P + Sbjct: 237 GVLPLEGLGPRLNLNSPQQIMEA-FRSIGIE--------LPDTRMWTL--LTVDHPAARD 285 Query: 627 ILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEG 686 +LEYR L K TY + ++PKTGR+H S+ Q TGRL+ T+PN+Q IP +E Sbjct: 286 LLEYRELQKKLGTYLETYEGFVHPKTGRIHASFLQCRVPTGRLACTNPNVQQIPHEDE-- 343 Query: 687 RRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPL 746 R+ F+A E V+V ADYSQIELRI+A +S D G + AF G+D+HR TAA +FG+P Sbjct: 344 --FRRCFVAGEGNVLVIADYSQIELRILAEVSGDPGFVEAFRRGEDLHRVTAATMFGVPK 401 Query: 747 ETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTR 806 E VT EQR +AK INFGL YG LA QL + A++ +D YF Y V Y+ T Sbjct: 402 EEVTKEQRSAAKRINFGLAYGRGPRSLAAQLGTDEERARRLIDEYFATYGRVQRYLNETA 461 Query: 807 AQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAW 866 +A ++G + TL GR + + A R A +R A+N P+QGT+ADI K A+I + + Sbjct: 462 NRALKEGALRTLSGRLRKFGRTRGLSSAERGALKREAMNYPIQGTSADIAKLALIFIHSE 521 Query: 867 LQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENC-TRL--DVPLLVEVGSGEN 923 L+ R+I +HDE V E ++ + A ++ M RL VP+ VEV Sbjct: 522 LRDLD--ARLINCIHDEFVVECAEEQAEEAASRVRSAMVRAGERLLKRVPVEVEVAVSRE 579 Query: 924 W 924 W Sbjct: 580 W 580 >UniRef50_A5X572 DNA polymerase nu n=8 Tax=Euteleostomi RepID=A5X572_DANRE Length = 1146 Score = 242 bits (617), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 152/447 (34%), Positives = 248/447 (55%), Gaps = 36/447 (8%) Query: 507 QLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAEL 566 +LH K+ + +G ++ IE ++PVL+ +E + +D + L SE L +L +L Sbjct: 690 ELHYKL-----RTQGLWQLYSGIEQKMIPVLAAMESYKMHVDKEALKKTSEMLGSKLKQL 744 Query: 567 EKKAHEIAGEEFNLSSTKQLQTILFEKQGI------KPLKKTPGGAPSTSEEVLEELALD 620 E++AH+ AG++F +SS+ QL+ ILFEK + K L KT STSE L +L Sbjct: 745 EQEAHQAAGQKFLVSSSAQLRLILFEKLRLHELCENKKLPKTVKQQQSTSETALLQLQKL 804 Query: 621 YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQ--- 677 +PLPK+ILEYR + K+K+T+ D + L KT + ++++Q T +GRLS+ PN Q Sbjct: 805 HPLPKIILEYRQIHKIKTTFVDGI-LSCTRKTF-ISSTWNQTSTVSGRLSAKHPNFQALP 862 Query: 678 NIPVRNEEGRRI------------RQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLT 725 +P++ + + I R FI E + +SAD+ Q+ELR++AHLS D LL Sbjct: 863 KLPLQISKKQYIHGKASDIVTVHPRAMFIPREGWTFLSADFCQVELRLLAHLSADPQLLR 922 Query: 726 AFAEGK-DIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEA 784 F + D AA+ G+ + V+ E R AK I + ++YG L+ L + +EA Sbjct: 923 IFQSPEADAFTMLAAQWKGVSEDRVSLEDREQAKRIVYSVVYGAGRERLSGILGVSAEEA 982 Query: 785 QKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAI 844 ++ D + + Y V +++ T + G+V ++ GRR +LP I S++ + R AER A+ Sbjct: 983 SRFQDSFLKTYREVPAFIQHTIQHCQSHGFVRSIMGRRRFLPHIHSADWSLRNQAERQAV 1042 Query: 845 NAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLM 904 N +QG+AAD+ K AMI + + + ++ R++ Q+HDEL+FEV +D A + + M Sbjct: 1043 NFVLQGSAADLAKLAMIRICSQVSSDSQTARLVAQIHDELLFEVEISQLDQFAALVKKTM 1102 Query: 905 ENC-------TRLDVPLLVEVGSGENW 924 E+ L VPL V + +G +W Sbjct: 1103 ESLQHIEYLNVNLSVPLKVLLSTGRSW 1129 >UniRef50_Q7TQ07 DNA polymerase nu n=13 Tax=Tetrapoda RepID=DPOLN_MOUSE Length = 864 Score = 241 bits (616), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 159/455 (34%), Positives = 247/455 (54%), Gaps = 41/455 (9%) Query: 503 DVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLR 562 D+T+ L K+ K G +F +E+PL+P+L+ +E + + +D + + S L R Sbjct: 405 DLTMDLCSKL-----KAYGLWQLFCTLELPLIPILAVMENHKIPVDKEEMERTSALLGAR 459 Query: 563 LAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL---KKTP----GGAPSTSEEVLE 615 L ELE++AH +AGE+F + S QL+ ILF K + L K P STSE +L Sbjct: 460 LKELEQEAHFVAGEQFLIMSNNQLREILFGKLKLHLLSQRKHLPRTGLQNQLSTSEAMLN 519 Query: 616 ELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPN 675 L +PLPK+ILEYR + K+KST+ D L + K G + ++++Q T TGRLS+ PN Sbjct: 520 SLQDLHPLPKLILEYRQVHKIKSTFIDGL--LAYMKKGSISSTWNQTGTVTGRLSAKHPN 577 Query: 676 LQNI---PVR----------NEEGRRI--RQAFIAPEDYVIVSADYSQIELRIMAHLSRD 720 +Q I P++ EE I R F++ E + ++AD+SQIELRI+AHLS D Sbjct: 578 IQGISKHPIKISKPWNFKGKEEETVTISPRTLFVSSEGHTFLAADFSQIELRILAHLSGD 637 Query: 721 KGLLTAFAEGK--DIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLN 778 LL F E + D+ ++ +P+E VT R K + + ++YG LA L Sbjct: 638 PELLKLFQESERDDVFSTLTSQWKDIPIERVTHMDREQTKKVVYSVVYGAGKERLAACLG 697 Query: 779 IPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAA 838 + EA +++ + ++Y + ++ + Q GYV ++ GRR LP I + + RA Sbjct: 698 VTVLEATHFLERFLQKYKKIKDFAQTVIGQCHSAGYVTSILGRRRPLPRICAQDQQLRAQ 757 Query: 839 AERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRV--RMIMQVHDELVFEVHKDDVDAV 896 AER A+N +QG+AAD+ K AMI + + A P + R++ Q+HDEL+FEV V Sbjct: 758 AERQAVNFVVQGSAADLCKLAMIRISTAV-ATSPTLTARLVAQIHDELLFEVEDTQVPEF 816 Query: 897 AKQIHQLMENCT-------RLDVPLLVEVGSGENW 924 A + ++ME+ +L VPL V + G +W Sbjct: 817 AALVRRIMESLQQVQTLELQLQVPLKVNLSVGRSW 851 >UniRef50_UPI0000D572BA PREDICTED: similar to DNA polymerase theta n=1 Tax=Tribolium castaneum RepID=UPI0000D572BA Length = 1588 Score = 241 bits (615), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 201/701 (28%), Positives = 331/701 (47%), Gaps = 96/701 (13%) Query: 267 VQQPAAEELLGLFKKYEFKRWTADVEAGKW--------LQAKGAKPAAKPQETSVADEAP 318 ++ AAE +L EF R ++ KW L + G A P E+ Sbjct: 937 TEREAAEMILA--NTREFLRIEMGLKEAKWAVKTNDISLNSTGDVIVASPDESYSFKTPK 994 Query: 319 EVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDN--ISANLVGLSFAIE 376 + T +S++ V + T I LE V A D DS + SANLV L+FA Sbjct: 995 KRTKRRLSHETPVK--KQRT----IFNLETVDVCAHDLLFDSFRHEIKSANLVALAFASC 1048 Query: 377 P-------GV-----AAYIPVA-------HDYLDAPDQISRERALELLKPLLEDEKALKV 417 P G+ + +P++ H D + ++L++ ++ +++ + Sbjct: 1049 PTKQGRTIGLNHTIKSPEVPISGFALFWGHSTAYYLDVAKKRETIDLIRHIVNEQQKTII 1108 Query: 418 GQNLKYDRGILANY-GIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEI 476 N K L + G+E R D + ++L + L E + Sbjct: 1109 MYNCKQQIKTLHKWHGVEFRSRVHDPKVADWLLQPEGQDKTLHQLVETYCP--------- 1159 Query: 477 AGKGKNQLTFNQIALEEAGRYAAEDA------DVTLQLHLKMWPDLQKHKGPLNVFENIE 530 +L +Q +DA + L H+ +++ K L + E Sbjct: 1160 ------ELPLDQ----------GQDAKLRSIFECYLSWHVLKNIEVELSKSNLLTVFDTE 1203 Query: 531 MPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTIL 590 M ++ +L+ IE G+ + L N + LT L +E++ H IAG F+ +S++QL IL Sbjct: 1204 MSIMRILANIELAGIGANVSTLSNLVDLLTRELKAIERQGHAIAGRHFSFASSRQLAKIL 1263 Query: 591 -FEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKL-PLMI 648 + K L+K D PL +IL++R K+ +T L PL+ Sbjct: 1264 QSDNNSKKSLQKN-----------------DNPLASLILKWR---KISATIGKTLQPLIR 1303 Query: 649 NPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNE-EGRRI--RQAFIAPEDYVIVSAD 705 + GR+ Y TATGR++ +PNLQN+ + +G + R+AF+ + +V+VSAD Sbjct: 1304 LVENGRIFGCY-VTHTATGRITMHEPNLQNVAKDFDIDGVEVSCRKAFVPSQGHVMVSAD 1362 Query: 706 YSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLI 765 + Q+ELR++AHLSRD+ L DI RA AA+ + VT E R+ AK I +G+I Sbjct: 1363 FCQLELRVLAHLSRDEVLGGILRRKGDIFRAIAAKWNNISENEVTEELRQRAKQIIYGII 1422 Query: 766 YGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYL 825 YGM + LA QLN +A ++M + YPGV +Y+ ++ G+VETL GRR +L Sbjct: 1423 YGMGSKALAEQLNTDEAQATRFMQTFRNAYPGVQKYISEIIETCRKTGFVETLAGRRRFL 1482 Query: 826 PDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELV 885 I NGA ++ AER A+N +QG+AAD++K AM+ ++ E+ V++++ +HDEL+ Sbjct: 1483 AHINHKNGAVKSQAERQAVNTTIQGSAADLVKMAMVRLETVFLGEK-EVKLVLHLHDELL 1541 Query: 886 FEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 +EV + + + + + ME +L +P V+V SG +W Q Sbjct: 1542 YEVPEGSLGSFVRILKTEMEGSVKLSIPFPVKVKSGPSWGQ 1582 >UniRef50_UPI000190CBC4 DNA polymerase I n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. E98-0664 RepID=UPI000190CBC4 Length = 136 Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 115/136 (84%), Positives = 126/136 (92%) Query: 270 PAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDN 329 P A+ELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAKPQET V DE+P A +SY+N Sbjct: 1 PIADELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAKPQETVVIDESPSEPAAALSYEN 60 Query: 330 YVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDY 389 YVTILD+ TL++WI KL+KAPVFAFDTETDSLDNI+ANLVGLSFAIEPGVAAY+PVAHDY Sbjct: 61 YVTILDDVTLESWIEKLKKAPVFAFDTETDSLDNIAANLVGLSFAIEPGVAAYVPVAHDY 120 Query: 390 LDAPDQISRERALELL 405 LDAPDQISR+RALELL Sbjct: 121 LDAPDQISRQRALELL 136 >UniRef50_Q8VL18 DNA polymerase I (Fragment) n=27 Tax=Bacteria RepID=Q8VL18_ECOLX Length = 114 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 114/114 (100%), Positives = 114/114 (100%) Query: 693 FIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSE 752 FIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSE Sbjct: 1 FIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSE 60 Query: 753 QRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTR 806 QRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTR Sbjct: 61 QRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTR 114 >UniRef50_B8C4R5 DNA polymerase (Fragment) n=1 Tax=Thalassiosira pseudonana RepID=B8C4R5_THAPS Length = 500 Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 150/427 (35%), Positives = 234/427 (54%), Gaps = 32/427 (7%) Query: 526 FENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEE-FNLSSTK 584 ENIE P+ +L+ +E GV P L + + R+ LE +A I + F LSS + Sbjct: 72 LENIEAPVQSILAAMECRGVAFYPNHLKRNEAQANERIEALEAQARTITNDSSFLLSSPQ 131 Query: 585 QLQTILFEKQGIKP---LKKTPGGAPSTSEEVLEEL-----ALDYPLPKVILEYRGLAKL 636 Q+ L++ +K L + STSEE L+ L +P+ VILE+R L KL Sbjct: 132 QISNYLYDILKMKVPSGLVQKTKSQRSTSEETLQALKAASNGSPHPIIDVILEFRTLNKL 191 Query: 637 KSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFI-- 694 +TY LP P+ R+H + + TGRLS PNLQ +P ++G +R++F+ Sbjct: 192 LTTYIKPLPTFCLPQ--RIHPQWSECAVRTGRLSCRQPNLQQVP--KDDGASVRRSFVPS 247 Query: 695 APEDYVIVSADYSQIELRIMAHLSRDKGLLTAFA--EGKDIHRATAAEVFGLPLETVTSE 752 E + + DYSQ E+RI+AH+S DK L++ F DI++ ++ + P+E++T++ Sbjct: 248 KKETMCLFACDYSQKEVRILAHMSGDKALISLFQMDANVDIYKQMSSLIRNKPVESITAQ 307 Query: 753 QRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQ 812 +R K + L+YGMS +A++LNI + +A + M+ +F R+ GV +ME T+ A+ Sbjct: 308 ERAQFKQVTLALLYGMSPNQVAKKLNITKSQAIQMMNDFFRRFQGVKNWMEDTKEFARRN 367 Query: 813 GYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQ- 871 YV T+ GRR YL I S + +A AER AIN +QG+AAD++K +MI + LQ Q Sbjct: 368 HYVVTIAGRRRYLDGIDSDDNGAKAQAERQAINTVIQGSAADLMKCSMINIAENLQRWQE 427 Query: 872 --------PRVRMIMQVHDELVFEVHKDDVD-----AVA-KQIHQLMENCTRLDVPLLVE 917 R R+++Q+HDELV E++ + D A+A K + + E L VPLL+ Sbjct: 428 DNSSNGTSSRPRILLQIHDELVLELNFVETDIRRLQAIATKSLTRDCEEYFHLKVPLLLT 487 Query: 918 VGSGENW 924 G +W Sbjct: 488 CSCGMSW 494 >UniRef50_UPI00019050E7 DNA polymerase I n=2 Tax=Rhizobium etli RepID=UPI00019050E7 Length = 452 Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 169/460 (36%), Positives = 235/460 (51%), Gaps = 72/460 (15%) Query: 138 DKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSDNIPGVPGVG 197 DKD+ QLVT N+ + ++M + +G +VV K+GVPPE +ID A+ GDS DN+PG+PG+G Sbjct: 1 DKDLMQLVTANVHMYDSMKDKQIGIPDVVEKWGVPPEKMIDLQAMTGDSVDNVPGIPGIG 60 Query: 198 EKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQLATIKTDVE 257 KTA LL+ G LDTL +I + R +T+ A N E+A LS +L ++TDV Sbjct: 61 PKTAAQLLEEYGDLDTLLERATEIKQVKRR--ETILA----NIEMAKLSRELVRLRTDVP 114 Query: 258 LELTCEQLEVQQPAAEELLGLFKKYEFKRWT------ADVEAG---------KWLQAKGA 302 L+L + L ++ +L+G K EF T D +A +W A Sbjct: 115 LDLDLDALVLEPQNGPKLIGFLKTMEFTTLTRRVAEVCDCDASAIEPAVVRIEWGDAAHG 174 Query: 303 KPAAKPQETSVADEAPEVTATVI--------------------------------SYDNY 330 + VA P+V+ + + Y Sbjct: 175 PDLDAAEPAPVAGGVPDVSGPSVPVPPRAKAGVEGAFSPADLAKARAEAFATLPFDHSTY 234 Query: 331 VTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVA---------A 381 VTI D TL WIA + AFDTET SLD + A LVG S AI VA A Sbjct: 235 VTIRDLATLDRWIADARDTGLVAFDTETTSLDAMQAELVGFSMAIADNVADPTGTKIRAA 294 Query: 382 YIPVAHD--------YLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGI 433 Y+P+AH A +Q+ AL LK LLED LKV QNLKYD ++ YGI Sbjct: 295 YVPLAHKNGVGDLLGGGLAENQVPMRDALPRLKALLEDAAVLKVAQNLKYDYLLMKRYGI 354 Query: 434 ELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEE 493 E + DTML SY+L++ G H MD L+E++L H I ++++AG G+ +TF+ + ++ Sbjct: 355 ETKSFD-DTMLISYVLDAGTGAHGMDPLSEKFLGHTPIPYKDVAGSGRANVTFDLVDIDR 413 Query: 494 AGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPL 533 A YAAEDADVTL+L L + P L G +V+E +E PL Sbjct: 414 ATHYAAEDADVTLRLWLVLKPRLAA-AGLTSVYERLERPL 452 >UniRef50_UPI000180C99B PREDICTED: similar to DNA polymerase theta n=1 Tax=Ciona intestinalis RepID=UPI000180C99B Length = 1711 Score = 235 bits (599), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 182/642 (28%), Positives = 306/642 (47%), Gaps = 90/642 (14%) Query: 334 LDEETLKAWIAKLEKAPVFAFDTETDSLDN-ISANLVGLSFAIEPGVAAYIPVAHDYLDA 392 +D E L + FAF + + LVGLS P V Y+ + Sbjct: 1096 IDHEKLSDFFHIWANETKFAFSVNVQTCTSEKDPKLVGLSLCWSPTVVYYLDI------- 1148 Query: 393 PDQISRER---ALELLKPLLE--DEKALKVGQNLKYDRGILANYGIELRGIAF-----DT 442 QI + R +E ++ + E DE +++ +K + N G+ G+ D Sbjct: 1149 --QILKTRHPSVIEDIQNIFESFDEDVIQIAFCIKDQFKWMLNSGVH--GVTTSNNWQDP 1204 Query: 443 MLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK-NQLTFNQIALEEAGRYAAED 501 M+ S++++ + + SL E + F++ N+ ++ ++ E+ + Sbjct: 1205 MIASWLMDPDNIKQGLFSLVEHYCSEHLYLFQDTKYDWDVNRPSYTSVSSEKVCCVESIA 1264 Query: 502 ADV-TLQLH-----LKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNH 555 + + LQL + MW +H F +EMP + ++ +E NG+++D +L + Sbjct: 1265 SYILMLQLEEQLSGMNMW----QH------FTGVEMPHMYCVALLELNGIEVDNSLLKRY 1314 Query: 556 SEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEE--- 612 EL L++KA +I G +FNLS+ K++ +LF++ + Sbjct: 1315 RLELHSASLALQEKAWKILGRKFNLSNPKEVSKVLFQELRLXXXXXXXXXXXXXXXXXYP 1374 Query: 613 -VLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVT--ATGRL 669 ++ ++Y L KVIL + LP P GR+H H+ +T TGR+ Sbjct: 1375 CIMSWRTVNYALNKVIL-----------LINSLP----PSCGRLH---HKCLTLTNTGRM 1416 Query: 670 SSTDPNLQNIPVR------------NEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHL 717 ++PN+Q+IP + +E+ +R F+A +++SADYSQIELRI+AHL Sbjct: 1417 IMSEPNIQSIPKQFSITKGSKSEADSEQSFCLRNIFVAGNGKLLISADYSQIELRILAHL 1476 Query: 718 SRDKGLLTAF-AEGKDIHRATAAEVFG--LPLETVTSEQRRSAKAINFGLIYGMSAFGLA 774 S D+ L+ AF + G DI ++ AA + ++ VT +QR + K +G++YGM A LA Sbjct: 1477 SGDETLIAAFNSSGVDIFKSIAAMFYSEISSIDDVTDKQRDTTKQTCYGILYGMGAQTLA 1536 Query: 775 RQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGA 834 +Q+N +AQ MD + YP V Y R AQ KE+GY+ET+ GRR YLP+IKS Sbjct: 1537 QQMNTSETDAQNAMDSFMNSYPMVKVYFNRLVAQCKEKGYIETISGRRRYLPEIKSVRLK 1596 Query: 835 RRAAAERAAINAPMQGTAADIIKRAM------IAVDAW------LQAEQPRVRMIMQVHD 882 R+ AER A+N+ +QG+AADI+K A +A W ++ ++ +HD Sbjct: 1597 MRSHAERQAVNSTIQGSAADIVKMATYKIHCAVASLGWNTLHQNTRSNTTDFFLVHHIHD 1656 Query: 883 ELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 EL++EV + + I + M + + V L V + G+ W Sbjct: 1657 ELIYEVDEKKLHEAVSVIERCMVDAFPMSVKLAVRIKVGKLW 1698 >UniRef50_C1XI40 DNA polymerase I n=24 Tax=Bacteria RepID=C1XI40_MEIRU Length = 1273 Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 130/275 (47%), Positives = 177/275 (64%), Gaps = 6/275 (2%) Query: 494 AGRYAAEDADVTLQLHLKMWPDLQKHKGPLN----VFENIEMPLVPVLSRIERNGVKIDP 549 AG + ++ + H +W LQ G +++ IE PL VL+RIE G+ ++ Sbjct: 406 AGDWGSDPGERAQAAH-TLWETLQSRIGENPKIEWLYQQIEKPLSAVLARIEARGISLNA 464 Query: 550 KVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIK-PLKKTPGGAPS 608 + L SEEL ++ LE + H +AG FN++S QL+ +L+++ + P +KT G S Sbjct: 465 EYLLQLSEELAKEISYLEAEIHRLAGRSFNVNSRDQLEVVLYDELKLSAPGRKTQTGKRS 524 Query: 609 TSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGR 668 T+ LEEL +P+ + IL YR L KLKSTY D LP +I+PKTGR+HT ++Q TATGR Sbjct: 525 TAASALEELLGQHPIIERILTYRELTKLKSTYLDPLPKLIHPKTGRLHTRFNQTGTATGR 584 Query: 669 LSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFA 728 LSS DPNLQNIPVR E GRRIR+AF A +V ADYSQIELR++AHLS D+ L+ F Sbjct: 585 LSSVDPNLQNIPVRTEIGRRIRKAFRAAPGMRLVVADYSQIELRVLAHLSGDENLINVFR 644 Query: 729 EGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFG 763 EG+DIH TAA +FGL + V +EQRR+AK + G Sbjct: 645 EGRDIHTQTAAWMFGLEPDKVGAEQRRAAKCLVEG 679 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 116/284 (40%), Positives = 163/284 (57%), Gaps = 10/284 (3%) Query: 2 VQIPQ-NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 V++P+ + + LVDG YR+Y AF L S GEPT A++G L L L+ + V Sbjct: 14 VELPRPDRIWLVDGHHLAYRSYFAFEKLATSRGEPTQAIFGFLRTLLKLLKEDGDC-VIV 72 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 VFD +TFR + FE YK+ R PDD Q+E + +V MGL L V G EADDVIGT Sbjct: 73 VFDPPTRTFRHDAFEEYKAGRAATPDDFHPQLEKIKELVDLMGLQRLEVPGYEADDVIGT 132 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL 180 LA++AE+ G PV I TGD+D QL++ + ++ ++ P+ V KYGV +D+ Sbjct: 133 LAKKAEQEGYPVRILTGDRDSFQLLSEAVQVM-LPDGRLMHPQAVQEKYGVSVAQWVDYR 191 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 +L+GDSSDN+PG G+GEKTA LLQ G L+ LYA E + + + A LE+++ Sbjct: 192 SLVGDSSDNLPGAKGIGEKTAAKLLQEWGSLEGLYANLEAL-------SPKIRASLEESR 244 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEF 284 + LS L+ I TD+ LEL ++P L +K EF Sbjct: 245 DNVQLSRTLSLIHTDLPLELDFRDCHRREPDRGALREALEKLEF 288 Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 82/195 (42%), Positives = 119/195 (61%), Gaps = 5/195 (2%) Query: 736 ATAAEVFGLPLE---TVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYF 792 A A V+ L +E +E S INFG++YGMSA L+ +L+I EA+ +++ YF Sbjct: 1080 AKPARVYDLSVEGKPAYLAEGFVSHNTINFGVLYGMSAHRLSNELSISYAEAEGFIERYF 1139 Query: 793 ERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTA 852 YP V E++ER A A++ GYVET+ GRR ++ D+ S + R AAER A N P+QGTA Sbjct: 1140 ASYPKVREWIERVLADARQTGYVETMFGRRRFVADLGSRVRSVREAAERMAFNMPVQGTA 1199 Query: 853 ADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDV 912 AD++K AM+ + + E +++QVHDEL+ E D +AVA + ++M+ L V Sbjct: 1200 ADLMKLAMVKLQP--ELEPLEAHLVLQVHDELLVEAPADKAEAVAGVVREVMQQAWALAV 1257 Query: 913 PLLVEVGSGENWDQA 927 PL V G GENW +A Sbjct: 1258 PLEVGTGIGENWLEA 1272 >UniRef50_B3M1V8 GF17871 n=1 Tax=Drosophila ananassae RepID=B3M1V8_DROAN Length = 2135 Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 158/470 (33%), Positives = 252/470 (53%), Gaps = 38/470 (8%) Query: 476 IAGKGKNQLTFNQIALEEAGRYAAE-----DADVTLQLHLKMWPDLQKHKGPLNVFENIE 530 + G G L + L+ + +A+ +A V++ + L++H+ + VF + E Sbjct: 1675 LCGSG---LGYTSYGLDASSEVSAQVRAQVEACVSVHILNGQMKSLEEHQF-IKVFRDNE 1730 Query: 531 MPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTIL 590 MPL +L+++E G + L N ++ + +LE K E+ G FN++S++ + +L Sbjct: 1731 MPLCLILAQMEVIGFPVKEHRLGNLISQIAGSMKKLEAKIFELNGSRFNINSSQAVAKVL 1790 Query: 591 FEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINP 650 GI + P G STS EVLE L + P+ +I +YR L L + PLM Sbjct: 1791 ----GIH---RKPTGRVSTSREVLERL--EAPIANLICQYRKLNAL--LVKNVQPLMKCC 1839 Query: 651 KTGRVHTSYHQAVTATGRLSSTDPNLQNIP---VRNEEGR----RIRQAFIAPEDY--VI 701 R+H + TATGR+S +PNLQN+ V + + R R AF+ P D + Sbjct: 1840 LNNRIH-GHSITNTATGRISMAEPNLQNVAKNFVVDVQDRGAIVSCRSAFM-PMDSTRCL 1897 Query: 702 VSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAIN 761 +SAD+ Q+E+RI+AHLS+DK L+ A +DI + +A + V+ + R K I Sbjct: 1898 LSADFCQLEMRILAHLSQDKALVAAMNSPRDIFTSISAHWHRMNESEVSDQLREGTKKIC 1957 Query: 762 FGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGR 821 +G+IYGMS LA +LN+ +EA+ + + YPG+ Y R A+ +GYVET+ GR Sbjct: 1958 YGIIYGMSMRKLADELNVTEQEAEVLSEQFHSNYPGIRSYTNRLIKYARHKGYVETITGR 2017 Query: 822 RLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQ-------AEQPRV 874 R YL +I+S + R AER A+N+ +QG+AADI K A+I +++ ++ V Sbjct: 2018 RRYLENIRSEDAGTRKKAERQAVNSTIQGSAADIAKVAIIKSVKYMRRHCQKLFIDENSV 2077 Query: 875 RMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 +++ +HDEL+FEV D +AK + +ME RL VPL V++ G W Sbjct: 2078 NLVLHIHDELMFEVPADKAKKIAKLLKVVMEASARLTVPLKVKLKMGSCW 2127 >UniRef50_B4KC49 GI21961 n=1 Tax=Drosophila mojavensis RepID=B4KC49_DROMO Length = 2181 Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 147/420 (35%), Positives = 222/420 (52%), Gaps = 33/420 (7%) Query: 523 LNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSS 582 L F +EMP+ L +E G L +++ + LE K +E+ G FNL S Sbjct: 1769 LKFFRELEMPIQMSLCHMECIGFPAKEHSLQRLFQQMMATMKRLESKIYELHGSRFNLGS 1828 Query: 583 TKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTD 642 T+ + +L L + G STS ++LE++ D P+ ++IL YR L+ L + Sbjct: 1829 TQAVAKVL-------GLHRKANGRVSTSRQILEKI--DSPISQLILNYRKLSMLLAKSMQ 1879 Query: 643 KLPLMINPKTGRVHTSYHQAVT--ATGRLSSTDPNLQNIP--VRNEEGRR-----IRQAF 693 PL+ + RVH Q++T ATGR+S ++PNLQN+ E G+ R AF Sbjct: 1880 --PLLKCCQANRVHG---QSITYTATGRISMSEPNLQNVAKDFHIELGKEQLKISCRSAF 1934 Query: 694 IAP--EDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTS 751 AP E ++SAD+ Q+E+RI+AHLS+DK LL +D+ A AA + V+ Sbjct: 1935 -APMDEKRCLISADFCQLEMRILAHLSQDKALLQVMNSTQDLFTAIAAHWNKIDESNVSE 1993 Query: 752 EQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKE 811 + R K I +G++YGM L+ L +EAQ + + YPG+ Y + A+ Sbjct: 1994 QLRNGTKQICYGIVYGMGMRSLSEALKCTEQEAQMITEQFHLAYPGIKAYTMKVVKFARN 2053 Query: 812 QGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQ 871 GYVET+ GRR YL I S + AER AIN+ +QG+AADI K A++ ++ L + Sbjct: 2054 NGYVETITGRRRYLDHINSGEVQLKTQAERQAINSTIQGSAADIAKSAILRMEKNLGRYR 2113 Query: 872 PR-------VRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 + V +++ +HDEL+FEV D VAK + MENC +L+VPL V++ G +W Sbjct: 2114 EKLGLAKNAVNLVLHLHDELIFEVPTDKAKKVAKVLSLTMENCVKLNVPLRVKLKIGRSW 2173 >UniRef50_A9U2H4 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U2H4_PHYPA Length = 1683 Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 154/455 (33%), Positives = 237/455 (52%), Gaps = 40/455 (8%) Query: 508 LHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELE 567 LH W L +G +EMPLV VL+ +E + +D +V L +L ELE Sbjct: 1222 LHCAFW-KLLVAEGLHEALLQLEMPLVRVLADMETWSLGLDMRVCRKAQSHLHCKLRELE 1280 Query: 568 KKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGA--PSTSEEVLEELALDYPLPK 625 + ++AG F+LS+ ++ +L+ + P+ G PST ++ LE L +P+ Sbjct: 1281 AQGEKLAGMSFSLSAPAEVAHVLYRHLKL-PVPPGCKGKHHPSTDKQALEFLRNHHPIAD 1339 Query: 626 VILEYRGLAKL-KSTYTDKLPLMINP--------KTGR-----VHTSYHQAVTATGRLSS 671 +I E+R L+KL +ST + +P ++ R + + Q TATGRLS Sbjct: 1340 IIKEHRSLSKLLQSTLGSIIAWAKSPEPLFSSQERSSRGEIFSIAGHWLQTSTATGRLSM 1399 Query: 672 TDPNLQNI----PVRNEEGRRI---------------RQAFI-APEDYVIVSADYSQIEL 711 DPNLQ + E GR + RQAF+ + E ++++SADYSQIEL Sbjct: 1400 EDPNLQCVEHAVSFTIEGGRSLDGDQEKANNVVEVNARQAFVPSQEGWILLSADYSQIEL 1459 Query: 712 RIMAHLSRDKGLLTAFAE-GKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSA 770 R+MAH S D L++ + D+ R AA+ GLP+ V+ +QR K + +G++YGM Sbjct: 1460 RLMAHFSGDPSLVSLLSHPTGDLFRVLAAQWTGLPMCEVSDKQRERTKRLVYGILYGMGV 1519 Query: 771 FGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKS 830 LA L P EAQ ++ + +P V ++ +++GY+ TL GR+ YL I + Sbjct: 1520 NTLAEHLECPVAEAQVMLERFKGTFPLVTTWLSHAVDSCRQKGYITTLSGRKRYLDKINT 1579 Query: 831 SNGARRAAAERAAINAPMQGTAADIIKRAMIAV-DAWLQAEQPRVRMIMQVHDELVFEVH 889 +A AER A+N+ QG+AAD+IK AMI V DA + Q R+++Q+HDEL+ EV Sbjct: 1580 GKWGEQAKAERQAVNSICQGSAADLIKLAMIKVHDAISSSHQGSCRLLLQIHDELLLEVD 1639 Query: 890 KDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 K + VA+ + ME L VPL ++ G +W Sbjct: 1640 KRVLKHVAQILRSSMEGAITLRVPLRTKLQVGTSW 1674 >UniRef50_Q7TQC0 DNA polymerase Q n=13 Tax=Deuterostomia RepID=Q7TQC0_MOUSE Length = 2587 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 175/612 (28%), Positives = 286/612 (46%), Gaps = 114/612 (18%) Query: 427 ILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEI-AGKGKNQLT 485 +L + GI L D + ++L+ + + S+ +L H+ E + G G L Sbjct: 1972 LLLSCGISLEPSYEDPKVACWLLDPDSKEPTLHSIVTSFLPHELALLEGMETGPGIQSLG 2031 Query: 486 FNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGV 545 N + E +GRY A V + + L + + ++F +EMP L+ +E NG+ Sbjct: 2032 LN-VNTEHSGRYRASVESVLIFNSMNQLNSLLQKENLHDIFCKVEMPSQYCLALLELNGI 2090 Query: 546 KIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKP------- 598 + + +L +E +A+++AG F+ +S + +LF + + P Sbjct: 2091 GFSTAECESQKHVMQAKLDAIETQAYQLAGHSFSFTSADDIAQVLFLELKLPPNGEMKTQ 2150 Query: 599 -LKKTPGGAP---------------STSEEVLEELALDYPLPKVILEYRGLAK--LKSTY 640 KKT G STS+++L +L +PLP +ILE+R ++ K + Sbjct: 2151 GSKKTLGSTRRGNESGRRMRLGRQFSTSKDILNKLKGLHPLPGLILEWRRISNAITKVVF 2210 Query: 641 TDKLPLMINP--KTGRVHTSYHQAVTATGRLSSTDPNLQNIP----------VRNE---- 684 + +NP + R++ Q+ TATGR++ T+PN+QN+P VR Sbjct: 2211 PLQREKHLNPLLRMERIYP-VSQSHTATGRITFTEPNIQNVPRDFEIKMPTLVRESPPSQ 2269 Query: 685 --EGR-----------------------------------RIRQAFIAPEDYVIVSADYS 707 +GR +R AF+ +I++ADYS Sbjct: 2270 APKGRFPMAIGQDKKVYGLHPGHRTQMEEKASDRGVPFSVSMRHAFVPFPGGLILAADYS 2329 Query: 708 QIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYG 767 Q+ELRI+AHLSRD L+ G D+ R+ AAE + + V + R+ AK I +G+IYG Sbjct: 2330 QLELRILAHLSRDCRLIQVLNTGADVFRSIAAEWKMIEPDAVGDDLRQHAKQICYGIIYG 2389 Query: 768 MSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPD 827 M A L Q+ I +A Y+D + RY G+ +M T ++ G+VET+ GRR YLP Sbjct: 2390 MGAKSLGEQMGIKENDAASYIDSFKSRYKGINHFMRDTVKNCRKNGFVETILGRRRYLPG 2449 Query: 828 IKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAV-----------------DAWLQAE 870 IK N +A AER AIN +QG+AADI+K A + + ++ LQ + Sbjct: 2450 IKDDNPYHKAHAERQAINTTVQGSAADIVKIATVNIQKQLETFRSTFKSHGHRESMLQND 2509 Query: 871 Q----PRVRM------------IMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPL 914 + P+ ++ I+Q+HDEL++EV ++DV VA+ + ME +L V L Sbjct: 2510 RTGLLPKRKLKGMFCPMRGGFFILQLHDELLYEVAEEDVVQVAQIVKNEMECAIKLSVKL 2569 Query: 915 LVEVGSGENWDQ 926 V+V G +W + Sbjct: 2570 KVKVKIGASWGE 2581 >UniRef50_C9Y9S8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9S8_9BURK Length = 430 Score = 225 bits (574), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 141/357 (39%), Positives = 192/357 (53%), Gaps = 15/357 (4%) Query: 36 TGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPL 95 TGA+ ++NM+ SL +Y + A VFDAKG TFRDE++ YK+HR PMPDDLR+QI P+ Sbjct: 50 TGAVRIMINMMNSLRKEYPADYVACVFDAKGPTFRDEIYPEYKAHRDPMPDDLRSQIAPI 109 Query: 96 HAMVKAMGLPLLAVSGVEADDVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTM 155 H +V+ +G +L V GVEADDVIGTLA A G V++S+GDKD+AQLV +IT+I+TM Sbjct: 110 HEIVRLLGWKVLDVPGVEADDVIGTLAATAASQGIEVIVSSGDKDLAQLVNEHITIIDTM 169 Query: 156 TNTILGPEEVVNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLY 215 V ++GVP L++D+ L+GD+ DN+PGV VG KTA LQ G L + Sbjct: 170 NGKRRDLAGVEAEFGVPARLMLDYQTLVGDTVDNVPGVAKVGPKTAVKWLQQYGSLQGVV 229 Query: 216 AEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAE-- 273 I G+ + L + + L TIKTD +L + L A Sbjct: 230 DNAANIGGV-------VGENLRKALDWLPTGRTLLTIKTDCDLTGWVDGLPAMDSIAAGA 282 Query: 274 ----ELLGLFKKYEFKRWTADVEAGK--WLQAKGAKPAAKPQETSVADEAPEVTATVISY 327 L ++KY FK V + + A+P A+ +S Sbjct: 283 QDTGALRAFYEKYGFKGLAKSVGGAETSAAAPAPSARTAEPGLFDEPAGEAAAPASRVST 342 Query: 328 DNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIP 384 Y TI E L A I ++ AP+ A DTET SLD + A +VG+SF+ EPG A IP Sbjct: 343 VEYETIFSYEALDALIQRIHAAPLTALDTETTSLDEMRAEIVGISFSTEPGKGATIP 399 >UniRef50_B2V602 5'-3' exonuclease n=4 Tax=Hydrogenothermaceae RepID=B2V602_SULSY Length = 299 Score = 225 bits (574), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 116/288 (40%), Positives = 174/288 (60%), Gaps = 8/288 (2%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 +N ++L+DGSSYLYRAY+A PPLT G PTGA+YG + ML + + + AV FD Sbjct: 2 KNKVLLIDGSSYLYRAYYALPPLTAPDGRPTGAVYGFIRMLLKTLSVFNTPYVAVAFDLP 61 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 GKT R E F YK+ R PD L+ QI L +++ +G+ +L + G EADD+I TL+++A Sbjct: 62 GKTLRHEKFSEYKATRKETPDPLKQQIPILKEIIQLLGIKILEIPGYEADDIIATLSKKA 121 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185 EK G +I T DKDM QL++ NI + N + +L E++ KYG+ P+ ID+L ++GD Sbjct: 122 EKEGYEAIIVTPDKDMNQLISDNIKIFNPVKEELLDKEKIKEKYGIHPQQFIDYLTMIGD 181 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTM-AAKLEQNKEVAY 244 + DNIPG+ G+G KTA ALLQ G L+ + +K+ G K + +L++ KE+ Sbjct: 182 AVDNIPGIKGIGPKTAAALLQEFGSLENILENVDKLKGKLKESFKELDKEQLQRMKEIIK 241 Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVE 292 L ++E+ + E L+ +P E+L +F++ FK DVE Sbjct: 242 LD-------ANIEINIKIEDLKKSKPDLEKLKQIFQELGFKSLLKDVE 282 >UniRef50_A4RWY1 Predicted protein n=2 Tax=Ostreococcus RepID=A4RWY1_OSTLU Length = 671 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 139/433 (32%), Positives = 227/433 (52%), Gaps = 35/433 (8%) Query: 520 KGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFN 579 +G + ++E + L ++ +GV D R+ ELE++A + G + N Sbjct: 231 RGDAPLARDVEAKVAVALGVLQHHGVGFDRTRADEQRRAANRRVEELEREAQKCIGVDIN 290 Query: 580 LSSTKQLQTILFEKQGI-----KPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLA 634 L+S +Q+ +L+ K + +K + STS EVL+ L + +++L +RG Sbjct: 291 LASAQQVADVLYNKLKLPTPSAHAMKGSKSSHLSTSVEVLQSLVKHHHFAQIVLNHRGAL 350 Query: 635 KLKSTYT--DKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGR-RIRQ 691 K ++ DK ++ R+HT ++ TATGRLSS+ PN+Q + GR +R Sbjct: 351 KERAMCDNYDKSAVIAADGRARIHTQWNNTKTATGRLSSSHPNIQQV------GRGTMRN 404 Query: 692 AFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGK-DIHRATAAEVFGLPLETVT 750 F+AP ++ADYSQIELR++AHLS D L++ + K D+ A GLPL+ Sbjct: 405 CFVAPTGRTFIAADYSQIELRVLAHLSGDDRLISLLRQAKGDVFVAIWNAGKGLPLDAPA 464 Query: 751 SEQRRS-AKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQA 809 + R AK +G++YG A GLA +L +P+ EAQ Y+ + +P V +++ R +A Sbjct: 465 EKSTRDIAKRTAYGIVYGQHATGLAEKLGVPKSEAQGYIAAFHRAFPKVNQWITRVLQRA 524 Query: 810 KEQGYVET-LDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQ 868 ++ G V + GR LP I S + R+ A+R A+N +QGTAAD++K AM+ W Sbjct: 525 EQTGAVTLPMSGRHRALPKIHSKVFSERSEAQRQAVNTIIQGTAADMMKTAMLR---WTS 581 Query: 869 A---------------EQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVP 913 A + RV ++ Q+HDEL+FEV +D V A+ + +MEN +L VP Sbjct: 582 AVGAGRFANDVAPGSVNKKRVTLVAQIHDELLFEVDEDYVPECARAVKNVMENAIKLAVP 641 Query: 914 LLVEVGSGENWDQ 926 +++ G +W + Sbjct: 642 TPIKLAVGTSWGE 654 >UniRef50_B4NI17 GK13557 n=1 Tax=Drosophila willistoni RepID=B4NI17_DROWI Length = 2080 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 141/420 (33%), Positives = 224/420 (53%), Gaps = 33/420 (7%) Query: 523 LNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSS 582 L F ++EMP+ L +E G + L S+++ + +LE K +E+ G FNL S Sbjct: 1668 LKFFRDLEMPIQLSLCNMEFTGFPAKQESLQGLSQQMLSTMKKLEAKIYELHGSRFNLGS 1727 Query: 583 TKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTD 642 ++ + +L L + G STS ++LE+L D P+ ++I+ YR L+ + + Sbjct: 1728 SQAVAKVL-------GLHRKASGKVSTSRQILEKL--DSPISQLIVGYRKLSTVLAKNVQ 1778 Query: 643 KLPLMINPKTGRVHTSYHQAV--TATGRLSSTDPNLQNIPV-------RNEEGRRIRQAF 693 PL+ + RV Y Q++ TATGR+S ++PNLQN+ ++ R AF Sbjct: 1779 --PLLKCCQDNRV---YGQSLSYTATGRISMSEPNLQNVAKDFEINLDSDKVNISCRSAF 1833 Query: 694 IAPEDY--VIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTS 751 + P D+ ++SAD+ Q+E+RI+AHLS+D LL +D+ A AA + V+ Sbjct: 1834 L-PMDFKRCLISADFCQLEMRILAHLSQDPALLEVMNSPRDLFTAIAARWNHMNESEVSE 1892 Query: 752 EQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKE 811 R K I +G++YGM LA L EAQ + + + Y G+ Y+++ A+ Sbjct: 1893 NLRNGTKQICYGIVYGMGMRSLAESLKCTENEAQTVSEQFHQTYAGISAYIQKVVKFARN 1952 Query: 812 QGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQ 871 GYVET+ GRR YL I S + AER AIN+ +QG+AADI K A++ ++ L + Sbjct: 1953 NGYVETITGRRRYLEHINSGELQIKNQAERQAINSTIQGSAADIAKSAILRMEKHLLRYR 2012 Query: 872 PR-------VRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 R V +++ +HDEL+FEV D +AK + ME+C +L VPL V++ G +W Sbjct: 2013 ERLGITENSVNLVLHLHDELIFEVPIDKAKKIAKVLSLTMESCVKLSVPLKVKLKIGRSW 2072 >UniRef50_B4MBB7 GJ14321 n=1 Tax=Drosophila virilis RepID=B4MBB7_DROVI Length = 2086 Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 141/419 (33%), Positives = 224/419 (53%), Gaps = 31/419 (7%) Query: 523 LNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSS 582 L F +EMP+ L +E G + L +++ + +LE K E+ G FNL S Sbjct: 1674 LKFFRELEMPIQMSLCNMECLGFPAQEQRLQRLLQQMLATMKKLEVKIFELHGSRFNLGS 1733 Query: 583 TKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTD 642 T+ + +L L + G STS ++LE+L D P+ ++IL++R L+ + + + Sbjct: 1734 TQAVAKVL-------GLHRKANGRISTSRQILEKL--DSPISQLILDHRKLSMVLAK--N 1782 Query: 643 KLPLMINPKTGRVHTSYHQAVT--ATGRLSSTDPNLQNIPV-------RNEEGRRIRQAF 693 PL+ + RVH Q++T ATGR+S ++PNLQN+ + + R AF Sbjct: 1783 MQPLLKCCQANRVHG---QSITYTATGRISMSEPNLQNVAKDFLVDLGQEKINISCRSAF 1839 Query: 694 IAP-EDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSE 752 ++ E + ++SAD+ Q+E+RI+AHLS+DK LL +D+ A AA + V+ + Sbjct: 1840 VSSNEKHCLLSADFCQLEMRILAHLSQDKALLKVMNSPQDLFTAIAAHWNKIAESDVSEQ 1899 Query: 753 QRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQ 812 R K I +G++YGM LA L +EAQ + + Y G+ Y + A+ Sbjct: 1900 LRNGTKQICYGIVYGMGMRSLAESLKCTEQEAQMISEQFHLAYAGIKAYASKVVKFARNN 1959 Query: 813 GYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQP 872 GYVET+ GRR YL I S + AER AIN+ +QG+AADI K A++ ++ + + Sbjct: 1960 GYVETITGRRRYLDHINSGEPQLKNQAERQAINSTIQGSAADIAKSAILRMEKNIARYRE 2019 Query: 873 R-------VRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 + V +++ +HDEL+FEV D VAK + MENC +L+VPL V++ G +W Sbjct: 2020 KLGLAENAVNLVLHLHDELIFEVPADKAKKVAKVLSLTMENCVKLNVPLRVKLKIGRSW 2078 >UniRef50_Q588V7 Helicase and polymerase containing protein TEBICHI n=7 Tax=Magnoliophyta RepID=Q588V7_ARATH Length = 2154 Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 158/489 (32%), Positives = 254/489 (51%), Gaps = 48/489 (9%) Query: 477 AGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPV 536 +G+ +NQ+ ++A R A+ T L +W L + L IEMPLV V Sbjct: 1664 SGRWRNQI--RRVAHNGCCRRVAQ----TRALCSALWKILVSEE-LLQALTTIEMPLVNV 1716 Query: 537 LSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGI 596 L+ +E G+ ID + L +L LEKKA E+AG F+L + + +LF + + Sbjct: 1717 LADMELWGIGIDIEGCLRARNILRDKLRSLEKKAFELAGMTFSLHNPADIANVLFGQLKL 1776 Query: 597 K-PLKKTPGG-APSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKL----PLMINP 650 P ++ G PST + L+ L ++P+ +I E+R LAKL + + L ++ Sbjct: 1777 PIPENQSKGKLHPSTDKHCLDLLRNEHPVVPIIKEHRTLAKLLNCTLGSICSLAKLRLST 1836 Query: 651 KTGRVHTSYHQAVTATGRLSSTDPNLQNIPVR-----NEEGRRIR----------QAFIA 695 + +H + Q TATGRLS +PNLQ++ ++ GR + + F Sbjct: 1837 QRYTLHGRWLQTSTATGRLSIEEPNLQSVEHEVEFKLDKNGRDVSSDADRYKINARDFFV 1896 Query: 696 P--EDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGK-DIHRATAAEVFGLPLETVTSE 752 P E++++++ADYSQIELR+MAH SRD L++ ++ + D+ AA+ G ++V+ Sbjct: 1897 PTQENWLLLTADYSQIELRLMAHFSRDSSLISKLSQPEGDVFTMIAAKWTGKAEDSVSPH 1956 Query: 753 QRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQ 812 R K + +G++YGM A LA QL EA++ + + +P V ++ T + +E+ Sbjct: 1957 DRDQTKRLIYGILYGMGANRLAEQLECTSDEAKEKIRSFKSSFPAVTSWLNETISFCQEK 2016 Query: 813 GYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAE-- 870 GY++TL GRR +L IK N ++ A+R A+N+ QG+AADIIK AMI + + + + Sbjct: 2017 GYIQTLKGRRRFLSKIKFGNAKEKSKAQRQAVNSMCQGSAADIIKIAMINIYSAIAEDVD 2076 Query: 871 ---------------QPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLL 915 + R R+++QVHDELV EV V A + MEN L VPL Sbjct: 2077 TAASSSSSETRFHMLKGRCRILLQVHDELVLEVDPSYVKLAAMLLQTSMENAVSLLVPLH 2136 Query: 916 VEVGSGENW 924 V++ G+ W Sbjct: 2137 VKLKVGKTW 2145 >UniRef50_O18475 FI03732p n=5 Tax=melanogaster subgroup RepID=O18475_DROME Length = 2059 Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 141/419 (33%), Positives = 225/419 (53%), Gaps = 31/419 (7%) Query: 523 LNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSS 582 L F +IEMP+ L ++E G + L + + + ++E K +E G FNL S Sbjct: 1647 LKFFHDIEMPIQLTLCQMELVGFPAQKQRLQQLYQRMVAVMKKVETKIYEQHGSRFNLGS 1706 Query: 583 TKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTD 642 ++ + +L L + G +TS +VLE+L + P+ +IL YR L+ L + Sbjct: 1707 SQAVAKVL-------GLHRKAKGRVTTSRQVLEKL--NSPISHLILGYRKLSGLLAKSIQ 1757 Query: 643 KLPLMINPKTGRVHTSYHQAVT--ATGRLSSTDPNLQNIP--VRNEEGRRI-----RQAF 693 PLM + R+H Q++T ATGR+S T+PNLQN+ + G + R F Sbjct: 1758 --PLMECCQADRIHG---QSITYTATGRISMTEPNLQNVAKEFSIQVGSDVVHISCRSPF 1812 Query: 694 I-APEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSE 752 + E ++SAD+ Q+E+RI+AH+S+DK LL +D+ A AA + VT + Sbjct: 1813 MPTDESRCLLSADFCQLEMRILAHMSQDKALLEVMKSSQDLFIAIAAHWNKIEESEVTQD 1872 Query: 753 QRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQ 812 R S K + +G++YGM LA LN +EA+ D + + Y G+ +Y R A+ + Sbjct: 1873 LRNSTKQVCYGIVYGMGMRSLAESLNCSEQEARMISDQFHQAYKGIRDYTTRVVNFARSK 1932 Query: 813 GYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQP 872 G+VET+ GRR YL +I S + AER A+N+ +QG+AADI K A++ ++ ++ + Sbjct: 1933 GFVETITGRRRYLENINSDVEHLKNQAERQAVNSTIQGSAADIAKNAILKMEKNIERYRE 1992 Query: 873 R-------VRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 + V ++M +HDEL+FEV +AK + MENC +L VPL V++ G +W Sbjct: 1993 KLALGDNSVDLVMHLHDELIFEVPTGKAKKIAKVLSLTMENCVKLSVPLKVKLRIGRSW 2051 >UniRef50_C4LXM4 DNA polymerase I n=4 Tax=Entamoeba RepID=C4LXM4_ENTHI Length = 657 Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 139/419 (33%), Positives = 230/419 (54%), Gaps = 23/419 (5%) Query: 523 LNVFENIEMPLVPVLSRIER-NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLS 581 + VF+ EM + VL + N KID K+L+ ++L ++E + +I G NLS Sbjct: 244 IKVFQEQEMIIDGVLIEMNYCNEFKIDNKLLNEQRKKLIEEQHKIEMETKKIIGRTINLS 303 Query: 582 STKQLQTILFEKQ-GIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTY 640 S +Q++ L GI +KK +T +++L + D+P K++LEYR ++KL S Sbjct: 304 SPEQVKKELIRFNIGIDGIKK----KATTDKKILSQS--DHPFAKLVLEYRKISKLLSGV 357 Query: 641 TDKLPLMINPKTGR---VHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE 697 +++ K+G + T++ Q TGR+ S PNLQ IP ++ + Q I P Sbjct: 358 IEQIRKCC-IKSGDEYFIRTTWSQTAIVTGRIQSKSPNLQQIP---KQSFSLPQCLIIPR 413 Query: 698 DYVI-------VSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVT 750 D I V+ DY+QIELRI+A ++D L+ F D+HR AA + +T Sbjct: 414 DLFITHNNNTFVAIDYNQIELRILADFTKDHHLIEFFKSNTDVHRLIAAHWLKKNVNDIT 473 Query: 751 SEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAK 810 ++RR AK I +G IYG+ F LA QL++ E++ +++ + +++P ++ E T A Sbjct: 474 DDERRKAKTIVYGCIYGIGPFSLADQLHVSLDESKAFLESFLDQFPAFKKWKEETITNAS 533 Query: 811 EQGYVETLDGRRLYLPDIKSSNGARRAA-AERAAINAPMQGTAADIIKRAMIAVDAWLQA 869 G+V T++ RR + ++ N + A ++R A+N+P+QGTAADIIK MI + L + Sbjct: 534 TTGFVHTINNRRRRINNLTDCNDKKTVAESKRIAVNSPIQGTAADIIKMCMIEIFKKLHS 593 Query: 870 EQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 V++++ +HDE+V EV +D V + LME+ +L+VPL+V V +G+ W H Sbjct: 594 SWVGVQLLLNIHDEIVLEVPDHLLDEVCVTLKHLMEHIVKLEVPLVVTVETGKKWGSLH 652 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q9F173 DNA polymerase I n=177 Tax=Proteobacteria RepID=... 1300 0.0 UniRef50_P43741 DNA polymerase I n=222 Tax=cellular organisms Re... 1153 0.0 UniRef50_Q9HT80 DNA polymerase I n=9 Tax=Gammaproteobacteria Rep... 1118 0.0 UniRef50_Q65W28 PolA protein n=42 Tax=Bacteria RepID=Q65W28_MANSM 1115 0.0 UniRef50_B9M4P2 DNA polymerase I n=3 Tax=Deltaproteobacteria Rep... 1109 0.0 UniRef50_A1ASW3 DNA polymerase I n=12 Tax=Deltaproteobacteria Re... 1096 0.0 UniRef50_A0LCQ8 DNA polymerase I n=1 Tax=Magnetococcus sp. MC-1 ... 1079 0.0 UniRef50_Q0F0N6 DNA polymerase I n=1 Tax=Mariprofundus ferrooxyd... 1077 0.0 UniRef50_Q6X9Q9 DNA polymerase I n=1 Tax=Spirochaeta thermophila... 1072 0.0 UniRef50_A7HP95 DNA polymerase I n=11 Tax=Alphaproteobacteria Re... 1069 0.0 UniRef50_A9ITV6 DNA polymerase I n=89 Tax=Proteobacteria RepID=A... 1067 0.0 UniRef50_Q21YU4 DNA polymerase I n=39 Tax=Betaproteobacteria Rep... 1060 0.0 UniRef50_B6R626 DNA polymerase I superfamily protein n=1 Tax=Pse... 1048 0.0 UniRef50_B8H5J7 DNA polymerase I n=23 Tax=Alphaproteobacteria Re... 1042 0.0 UniRef50_B6IUP1 DNA polymerase I, putative n=2 Tax=Alphaproteoba... 1040 0.0 UniRef50_A9H4T5 DNA polymerase I n=43 Tax=Alphaproteobacteria Re... 1036 0.0 UniRef50_B9KYZ1 DNA polymerase I n=4 Tax=Thermomicrobia (class) ... 1035 0.0 UniRef50_A6KZN3 DNA polymerase I n=15 Tax=Bacteroides RepID=A6KZ... 1029 0.0 UniRef50_D0XR83 DNA polymerase I n=2 Tax=Alphaproteobacteria Rep... 1025 0.0 UniRef50_A0LIP7 DNA polymerase I n=1 Tax=Syntrophobacter fumarox... 1021 0.0 UniRef50_Q1QDQ1 DNA polymerase I n=24 Tax=cellular organisms Rep... 1016 0.0 UniRef50_Q9S1G2 DNA polymerase I n=25 Tax=Rhizobiales RepID=DPO1... 1015 0.0 UniRef50_Q2LQV1 DNA polymerase I n=1 Tax=Syntrophus aciditrophic... 1015 0.0 UniRef50_A5EWG4 DNA polymerase I n=10 Tax=Gammaproteobacteria Re... 1012 0.0 UniRef50_A5WH47 DNA polymerase I n=4 Tax=Bacteria RepID=A5WH47_P... 1012 0.0 UniRef50_Q1NVM3 DNA polymerase A n=2 Tax=Deltaproteobacteria Rep... 1006 0.0 UniRef50_B2RLP5 DNA polymerase I n=2 Tax=Porphyromonas gingivali... 1003 0.0 UniRef50_Q1PUU8 Stongly similair to DNA polymerase I n=1 Tax=Can... 1001 0.0 UniRef50_A4YLA1 DNA polymerase I (POL I) n=63 Tax=cellular organ... 1000 0.0 UniRef50_D1R879 Putative uncharacterized protein n=1 Tax=Parachl... 997 0.0 UniRef50_C1ZLA6 DNA polymerase I n=1 Tax=Planctomyces limnophilu... 995 0.0 UniRef50_Q1V0V5 DNA polymerase I n=3 Tax=Candidatus Pelagibacter... 995 0.0 UniRef50_C8QY72 DNA polymerase I n=1 Tax=Desulfurivibrio alkalip... 992 0.0 UniRef50_A6CAX6 DNA polymerase I n=2 Tax=Planctomycetaceae RepID... 992 0.0 UniRef50_Q7UI29 DNA polymerase I n=1 Tax=Rhodopirellula baltica ... 991 0.0 UniRef50_A6TSU6 DNA polymerase I n=13 Tax=Clostridiaceae RepID=A... 990 0.0 UniRef50_Q2GBP7 DNA polymerase I n=10 Tax=Alphaproteobacteria Re... 986 0.0 UniRef50_B0MYJ0 Putative uncharacterized protein n=1 Tax=Alistip... 986 0.0 UniRef50_Q11NX3 DNA polymerase I n=11 Tax=Bacteria RepID=Q11NX3_... 986 0.0 UniRef50_D2R075 DNA polymerase I n=1 Tax=Pirellula staleyi DSM 6... 985 0.0 UniRef50_C8PRX0 DNA polymerase I n=1 Tax=Treponema vincentii ATC... 984 0.0 UniRef50_Q6X9S0 DNA polymerase I n=3 Tax=Bacillales RepID=Q6X9S0... 984 0.0 UniRef50_Q04Q27 DNA-directed DNA polymerase n=4 Tax=Leptospira R... 983 0.0 UniRef50_Q2S226 DNA polymerase I n=4 Tax=Rhodothermaceae RepID=Q... 981 0.0 UniRef50_C6W4A8 DNA polymerase I n=44 Tax=Bacteria RepID=C6W4A8_... 981 0.0 UniRef50_B0SCM1 DNA-directed DNA polymerase n=2 Tax=Leptospira b... 981 0.0 UniRef50_C5CIW2 DNA polymerase I n=1 Tax=Kosmotoga olearia TBF 1... 980 0.0 UniRef50_UPI0001744922 DNA polymerase I n=1 Tax=Verrucomicrobium... 979 0.0 UniRef50_B2IJU1 DNA polymerase I n=25 Tax=cellular organisms Rep... 976 0.0 UniRef50_B3TC83 Putative DNA polymerase family A n=1 Tax=uncultu... 976 0.0 UniRef50_C1A3H5 DNA polymerase I n=1 Tax=Gemmatimonas aurantiaca... 975 0.0 UniRef50_D1CFH6 DNA polymerase I n=1 Tax=Thermobaculum terrenum ... 974 0.0 UniRef50_B0VJ17 DNA polymerase I n=1 Tax=Candidatus Cloacamonas ... 971 0.0 UniRef50_D0RQG2 DNA polymerase I n=1 Tax=alpha proteobacterium H... 969 0.0 UniRef50_O34996 DNA polymerase I n=38 Tax=Bacteria RepID=DPO1_BACSU 968 0.0 UniRef50_O08307 DNA polymerase I n=4 Tax=Chloroflexi (class) Rep... 965 0.0 UniRef50_B4S5F3 DNA polymerase I n=12 Tax=Chlorobiaceae RepID=B4... 964 0.0 UniRef50_B2UNN5 DNA polymerase I n=1 Tax=Akkermansia muciniphila... 964 0.0 UniRef50_B8D217 DNA polymerase I n=1 Tax=Halothermothrix orenii ... 963 0.0 UniRef50_C3J9S9 DNA polymerase type I n=2 Tax=Bacteria RepID=C3J... 963 0.0 UniRef50_A9G0B1 DNA polymerase I n=3 Tax=Sorangium cellulosum 'S... 962 0.0 UniRef50_Q2RHE8 DNA polymerase I n=4 Tax=Clostridia RepID=Q2RHE8... 961 0.0 UniRef50_Q6MEQ2 Probable DNA polymerase I n=1 Tax=Candidatus Pro... 960 0.0 UniRef50_Q7VRJ4 DNA polymerase I n=3 Tax=Enterobacteriaceae RepI... 960 0.0 UniRef50_A7HD60 DNA polymerase I n=2 Tax=Cystobacterineae RepID=... 960 0.0 UniRef50_Q2JPZ4 DNA polymerase I n=3 Tax=Cyanobacteria RepID=Q2J... 960 0.0 UniRef50_A5CXW1 DNA polymerase I n=2 Tax=sulfur-oxidizing symbio... 958 0.0 UniRef50_C8W0H1 DNA polymerase I n=2 Tax=Clostridia RepID=C8W0H1... 957 0.0 UniRef50_Q3Z6P9 DNA-directed DNA polymerase I n=5 Tax=Dehalococc... 952 0.0 UniRef50_Q73M72 DNA polymerase I n=1 Tax=Treponema denticola Rep... 951 0.0 UniRef50_Q0AVE2 DNA polymerase I n=1 Tax=Syntrophomonas wolfei s... 951 0.0 UniRef50_A7NJD5 DNA polymerase I n=2 Tax=Roseiflexus RepID=A7NJD... 949 0.0 UniRef50_B0TER6 DNA polymerase i n=2 Tax=Heliobacteriaceae RepID... 946 0.0 UniRef50_C0QYF7 DNA polymerase I n=3 Tax=Brachyspira RepID=C0QYF... 944 0.0 UniRef50_Q04957 DNA polymerase I n=117 Tax=Firmicutes RepID=DPO1... 940 0.0 UniRef50_B6YQQ9 DNA polymerase I n=13 Tax=Bacteroidales RepID=B6... 939 0.0 UniRef50_A7HJZ2 DNA polymerase I n=11 Tax=Bacteria RepID=A7HJZ2_... 937 0.0 UniRef50_C6XHK7 DNA polymerase I n=1 Tax=Candidatus Liberibacter... 936 0.0 UniRef50_A6FZM5 DNA polymerase I n=2 Tax=Deltaproteobacteria Rep... 935 0.0 UniRef50_B1GZ14 DNA polymerase I n=1 Tax=uncultured Termite grou... 934 0.0 UniRef50_B1WPN5 DNA polymerase I n=13 Tax=Bacteria RepID=B1WPN5_... 931 0.0 UniRef50_C9RNE9 DNA polymerase I n=1 Tax=Fibrobacter succinogene... 930 0.0 UniRef50_B8I3Y7 DNA polymerase I n=6 Tax=Clostridium RepID=B8I3Y... 930 0.0 UniRef50_B0KAJ0 DNA polymerase I n=12 Tax=Thermoanaerobacterales... 928 0.0 UniRef50_Q1D7R1 DNA polymerase I n=4 Tax=Myxococcaceae RepID=Q1D... 927 0.0 UniRef50_Q02DA6 DNA polymerase I n=1 Tax=Candidatus Solibacter u... 924 0.0 UniRef50_A6NVK8 DNA polymerase I n=2 Tax=Bacteria RepID=A6NVK8_9... 922 0.0 UniRef50_A9BEU8 DNA polymerase I n=1 Tax=Petrotoga mobilis SJ95 ... 921 0.0 UniRef50_C4Z0G0 DNA polymerase I n=23 Tax=Bacteria RepID=C4Z0G0_... 920 0.0 UniRef50_UPI0001C17162 DNA polymerase A n=2 Tax=Nostocaceae RepI... 919 0.0 UniRef50_A6G5W6 DNA polymerase I n=2 Tax=cellular organisms RepI... 919 0.0 UniRef50_D2RIE4 DNA polymerase I n=5 Tax=Clostridiales RepID=D2R... 919 0.0 UniRef50_A0PZF5 DNA polymerase I n=27 Tax=Clostridia RepID=A0PZF... 918 0.0 UniRef50_B9YEU0 DNA polymerase I n=2 Tax=Cyanobacteria RepID=B9Y... 918 0.0 UniRef50_Q55971 DNA polymerase I n=13 Tax=Cyanobacteria RepID=DP... 918 0.0 UniRef50_C2MBR8 DNA polymerase type I n=1 Tax=Porphyromonas ueno... 914 0.0 UniRef50_Q3ABL3 DNA polymerase I n=1 Tax=Carboxydothermus hydrog... 913 0.0 UniRef50_P74933 DNA polymerase I n=3 Tax=Bacteria RepID=DPO1_TREPA 911 0.0 UniRef50_C7HT94 DNA polymerase I n=1 Tax=Anaerococcus vaginalis ... 910 0.0 UniRef50_C4Z982 DNA polymerase I n=2 Tax=Clostridiales RepID=C4Z... 906 0.0 UniRef50_C7GEY2 DNA polymerase I n=6 Tax=Clostridiales RepID=C7G... 904 0.0 UniRef50_D1VS49 DNA polymerase I n=1 Tax=Peptoniphilus lacrimali... 903 0.0 UniRef50_Q6MPP6 DNA polymerase I n=1 Tax=Bdellovibrio bacteriovo... 903 0.0 UniRef50_B1YKA1 DNA polymerase I n=3 Tax=Bacilli RepID=B1YKA1_EXIS2 901 0.0 UniRef50_D1AZX7 DNA polymerase I n=3 Tax=Campylobacterales RepID... 900 0.0 UniRef50_C7RDU0 DNA polymerase I n=3 Tax=Anaerococcus RepID=C7RD... 899 0.0 UniRef50_B8FU82 DNA polymerase I n=2 Tax=Desulfitobacterium hafn... 898 0.0 UniRef50_C7MNN5 DNA polymerase I n=2 Tax=Coriobacteriaceae RepID... 897 0.0 UniRef50_Q7WZP8 DNA polymerase type I n=2 Tax=unclassified Bacte... 896 0.0 UniRef50_D1BM52 DNA polymerase I n=6 Tax=Veillonellaceae RepID=D... 895 0.0 UniRef50_A8SN89 DNA polymerase I n=2 Tax=Clostridiales Family XI... 890 0.0 UniRef50_A1QZY0 DNA polymerase I n=1 Tax=Borrelia turicatae 91E1... 890 0.0 UniRef50_C5RBK8 DNA polymerase I n=9 Tax=Lactobacillales RepID=C... 890 0.0 UniRef50_B0S404 DNA polymerase I n=2 Tax=Finegoldia magna RepID=... 888 0.0 UniRef50_C5B5N3 DNA polymerase I n=1 Tax=Methylobacterium extorq... 888 0.0 UniRef50_B5RMA2 DNA polymerase I n=2 Tax=Borrelia RepID=B5RMA2_B... 883 0.0 UniRef50_C9LLQ0 DNA polymerase I n=1 Tax=Dialister invisus DSM 1... 883 0.0 UniRef50_Q1JIU7 DNA polymerase I n=14 Tax=Streptococcus RepID=Q1... 883 0.0 UniRef50_P52028 DNA polymerase I, thermostable n=18 Tax=Bacteria... 882 0.0 UniRef50_Q30R59 DNA polymerase A n=6 Tax=Epsilonproteobacteria R... 880 0.0 UniRef50_Q3AZ16 DNA polymerase A n=12 Tax=Chroococcales RepID=Q3... 879 0.0 UniRef50_A2C810 DNA polymerase I n=16 Tax=Cyanobacteria RepID=A2... 878 0.0 UniRef50_C4GAN0 Putative uncharacterized protein n=1 Tax=Shuttle... 878 0.0 UniRef50_C8PHS8 DNA polymerase I n=2 Tax=Campylobacter RepID=C8P... 878 0.0 UniRef50_B4U0B7 DNA polymerase I n=5 Tax=Streptococcus RepID=B4U... 878 0.0 UniRef50_P59200 DNA polymerase I n=187 Tax=Firmicutes RepID=DPO1... 875 0.0 UniRef50_B9Y7P1 DNA polymerase I n=2 Tax=Erysipelotrichaceae Rep... 875 0.0 UniRef50_UPI0001978038 DNA polymerase I n=1 Tax=Helicobacter cin... 873 0.0 UniRef50_B1C859 DNA polymerase I n=1 Tax=Anaerofustis stercoriho... 873 0.0 UniRef50_B9L837 DNA polymerase I n=2 Tax=Nautiliaceae RepID=B9L8... 872 0.0 UniRef50_D0LQ66 DNA polymerase I n=1 Tax=Haliangium ochraceum DS... 871 0.0 UniRef50_Q9RAA9 DNA polymerase I n=2 Tax=spotted fever group Rep... 870 0.0 UniRef50_Q2JCJ5 DNA polymerase I n=10 Tax=Actinomycetales RepID=... 870 0.0 UniRef50_Q04G12 DNA polymerase I n=28 Tax=Lactobacillales RepID=... 869 0.0 UniRef50_B2TNM6 DNA polymerase I n=7 Tax=Clostridiales RepID=B2T... 868 0.0 UniRef50_O51498 DNA polymerase I n=20 Tax=Borrelia RepID=DPO1_BORBU 868 0.0 UniRef50_C1A095 DNA polymerase I n=60 Tax=Actinomycetales RepID=... 867 0.0 UniRef50_A8R8A1 DNA polymerase I n=2 Tax=unclassified Erysipelot... 866 0.0 UniRef50_B1BYY4 DNA polymerase I n=4 Tax=Bacteria RepID=B1BYY4_9... 866 0.0 UniRef50_Q1RH76 DNA polymerase I n=18 Tax=Rickettsia RepID=DPO1_... 864 0.0 UniRef50_Q1II21 DNA polymerase I n=2 Tax=Acidobacteria RepID=Q1I... 863 0.0 UniRef50_D0WFK8 DNA polymerase I n=2 Tax=Coriobacteriaceae RepID... 861 0.0 UniRef50_B0PCZ2 DNA polymerase I n=3 Tax=Clostridiales RepID=B0P... 858 0.0 UniRef50_B5YG86 DNA polymerase I n=1 Tax=Thermodesulfovibrio yel... 858 0.0 UniRef50_C8W7U1 DNA polymerase I n=3 Tax=Coriobacteriaceae RepID... 857 0.0 UniRef50_UPI00016BFC66 DNA polymerase I n=1 Tax=Epulopiscium sp.... 856 0.0 UniRef50_D0L9T3 DNA polymerase I n=2 Tax=Corynebacterineae RepID... 856 0.0 UniRef50_A8FKC7 DNA polymerase I n=20 Tax=Campylobacter RepID=A8... 855 0.0 UniRef50_B5YDJ0 DNA polymerase I n=3 Tax=Dictyoglomus RepID=B5YD... 853 0.0 UniRef50_Q5HCC8 DNA polymerase I n=14 Tax=Rickettsiales RepID=Q5... 852 0.0 UniRef50_Q59156 DNA polymerase I n=6 Tax=Clostridia RepID=DPO1_A... 851 0.0 UniRef50_A9NF42 DNA polymerase I n=1 Tax=Acholeplasma laidlawii ... 850 0.0 UniRef50_B6G9J6 Putative uncharacterized protein n=2 Tax=Collins... 849 0.0 UniRef50_C4LIB4 DNA polymerase I n=1 Tax=Corynebacterium kroppen... 849 0.0 UniRef50_B2A646 DNA polymerase I n=1 Tax=Natranaerobius thermoph... 849 0.0 UniRef50_P46835 DNA polymerase I n=51 Tax=Actinobacteridae RepID... 849 0.0 UniRef50_B0MR22 DNA polymerase I n=1 Tax=Eubacterium siraeum DSM... 847 0.0 UniRef50_UPI0001976BF8 DNA polymerase I n=1 Tax=Bifidobacterium ... 845 0.0 UniRef50_Q118S8 DNA polymerase I n=4 Tax=Cyanobacteria RepID=Q11... 843 0.0 UniRef50_A5CDT3 DNA polymerase I n=2 Tax=Orientia tsutsugamushi ... 843 0.0 UniRef50_Q7VGK4 DNA polymerase I n=8 Tax=Campylobacterales RepID... 841 0.0 UniRef50_A0JWM3 DNA polymerase I n=7 Tax=Actinobacteria (class) ... 839 0.0 UniRef50_A9KNZ3 DNA polymerase I n=4 Tax=Firmicutes RepID=A9KNZ3... 839 0.0 UniRef50_C2D755 DNA-directed DNA polymerase n=1 Tax=Atopobium va... 839 0.0 UniRef50_Q4JW27 DNA polymerase I n=2 Tax=Corynebacterium jeikeiu... 839 0.0 UniRef50_B8DUU4 DNA polymerase I n=16 Tax=Bifidobacterium RepID=... 833 0.0 UniRef50_UPI0001C32326 DNA polymerase I n=1 Tax=Conexibacter woe... 829 0.0 UniRef50_C2BWF0 DNA-directed DNA polymerase n=1 Tax=Mobiluncus c... 827 0.0 UniRef50_B6WQX5 Putative uncharacterized protein n=1 Tax=Desulfo... 826 0.0 UniRef50_C5CBM1 DNA polymerase I n=2 Tax=Micrococcus luteus NCTC... 826 0.0 UniRef50_C0E901 Putative uncharacterized protein (Fragment) n=2 ... 825 0.0 UniRef50_C7H3Z2 DNA polymerase I n=2 Tax=Ruminococcaceae RepID=C... 825 0.0 UniRef50_Q14QK7 DNA polymerase I n=1 Tax=Spiroplasma citri RepID... 820 0.0 UniRef50_C4FFL7 Putative uncharacterized protein n=2 Tax=Bifidob... 819 0.0 UniRef50_C6C0R6 DNA polymerase I n=3 Tax=Desulfovibrio RepID=C6C... 819 0.0 UniRef50_Q252Y8 DNA polymerase I n=14 Tax=Chlamydiaceae RepID=Q2... 818 0.0 UniRef50_Q30VQ3 DNA polymerase I n=7 Tax=Desulfovibrionales RepI... 814 0.0 UniRef50_Q2GI23 DNA polymerase I n=6 Tax=Rickettsiales RepID=Q2G... 812 0.0 UniRef50_D2VA69 DNA polymerase I n=1 Tax=Naegleria gruberi RepID... 811 0.0 UniRef50_A5TW64 DNA-directed DNA polymerase I n=10 Tax=Fusobacte... 810 0.0 UniRef50_UPI0001BC5C75 DNA polymerase I n=3 Tax=Fusobacterium Re... 810 0.0 UniRef50_P52027 DNA polymerase I n=4 Tax=Deinococci RepID=DPO1_D... 809 0.0 UniRef50_D1AJI6 DNA polymerase I n=2 Tax=Fusobacteriaceae RepID=... 805 0.0 UniRef50_B8IZN9 DNA polymerase I n=1 Tax=Desulfovibrio desulfuri... 802 0.0 UniRef50_C3WHF0 DNA polymerase I n=3 Tax=Fusobacterium RepID=C3W... 798 0.0 UniRef50_B2KCD2 DNA polymerase I n=1 Tax=Elusimicrobium minutum ... 798 0.0 UniRef50_B2GGW1 DNA polymerase I n=1 Tax=Kocuria rhizophila DC22... 791 0.0 UniRef50_A3EQ00 DNA polymerase I n=3 Tax=Leptospirillum RepID=A3... 791 0.0 UniRef50_C7GZ50 DNA polymerase I n=1 Tax=Eubacterium saphenum AT... 790 0.0 UniRef50_C8NZ98 DNA polymerase I n=1 Tax=Erysipelothrix rhusiopa... 784 0.0 UniRef50_D2RAL7 DNA-directed DNA polymerase n=2 Tax=Gardnerella ... 778 0.0 UniRef50_C7LZ56 DNA polymerase I n=1 Tax=Acidimicrobium ferrooxi... 769 0.0 UniRef50_D2NTK8 DNA polymerase I n=2 Tax=Rothia mucilaginosa Rep... 765 0.0 UniRef50_Q2SRK9 DNA polymerase I n=4 Tax=Mollicutes RepID=Q2SRK9... 764 0.0 UniRef50_C1TPP4 DNA polymerase I n=2 Tax=Synergistaceae RepID=C1... 762 0.0 UniRef50_D1Y4U0 DNA polymerase I n=1 Tax=Pyramidobacter piscolen... 759 0.0 UniRef50_Q2GD93 DNA polymerase I n=2 Tax=Neorickettsia RepID=Q2G... 735 0.0 UniRef50_UPI00016C3887 DNA polymerase I n=1 Tax=Gemmata obscurig... 729 0.0 UniRef50_Q1AUF6 DNA polymerase I n=1 Tax=Rubrobacter xylanophilu... 713 0.0 UniRef50_D1AV04 DNA polymerase I n=1 Tax=Streptobacillus monilif... 705 0.0 UniRef50_Q8I7W9 Mitochondrial DNA polymerase A n=2 Tax=Eukaryota... 683 0.0 UniRef50_Q9ZJE9 DNA polymerase I n=17 Tax=Helicobacter RepID=DPO... 678 0.0 UniRef50_D2QFD0 DNA polymerase I n=3 Tax=Bacteria RepID=D2QFD0_9... 661 0.0 UniRef50_A6DML3 DNA-directed DNA polymerase, DNA polimerase I pr... 656 0.0 UniRef50_Q057H2 5'-3' exonuclease domain of DNA polymerase I n=2... 655 0.0 UniRef50_D1PTJ0 DNA-directed DNA polymerase I (Fragment) n=1 Tax... 654 0.0 UniRef50_C7N982 DNA polymerase I n=6 Tax=Leptotrichia RepID=C7N9... 646 0.0 UniRef50_C1XI40 DNA polymerase I n=24 Tax=Bacteria RepID=C1XI40_... 604 e-171 UniRef50_C3XEZ4 DNA polymerase I n=3 Tax=Bacteria RepID=C3XEZ4_9... 536 e-150 UniRef50_C0X9C2 Possible DNA polymerase I (Fragment) n=3 Tax=Fir... 517 e-145 UniRef50_Q72ES3 DNA polymerase I n=3 Tax=Desulfovibrio vulgaris ... 514 e-144 UniRef50_D0YSZ1 DNA polymerase I n=6 Tax=Actinobacteridae RepID=... 501 e-140 UniRef50_A5D075 DNA polymerase I-3'-5' exonuclease and polymeras... 495 e-138 UniRef50_C3U0N1 Truncated DNA polymerase I n=1 Tax=uncultured ba... 491 e-137 UniRef50_C8VXR3 DNA-directed DNA polymerase n=1 Tax=Desulfotomac... 473 e-131 UniRef50_C1SHV2 DNA polymerase I n=1 Tax=Denitrovibrio acetiphil... 464 e-129 UniRef50_B3RWI3 Putative uncharacterized protein (Fragment) n=1 ... 449 e-124 UniRef50_C3U0N4 DNA polymerase I n=1 Tax=uncultured bacterium Re... 446 e-123 UniRef50_A3DFZ4 DNA-directed DNA polymerase n=3 Tax=Clostridium ... 443 e-122 UniRef50_D1B5M0 DNA polymerase I n=1 Tax=Thermanaerovibrio acida... 440 e-122 UniRef50_Q7TQC0 DNA polymerase Q n=13 Tax=Deuterostomia RepID=Q7... 439 e-121 UniRef50_Q7TQ07 DNA polymerase nu n=13 Tax=Tetrapoda RepID=DPOLN... 437 e-121 UniRef50_B0TCV6 DNA polymerase i n=1 Tax=Heliobacterium modestic... 437 e-120 UniRef50_UPI0000DAED41 hypothetical protein Wendoof_01000149 n=1... 435 e-120 UniRef50_Q4UGW4 DNA polymerase i, putative n=2 Tax=Theileria Rep... 434 e-120 UniRef50_C3YL74 Putative uncharacterized protein (Fragment) n=1 ... 434 e-120 UniRef50_Q7Z5Q5 DNA polymerase nu n=15 Tax=Amniota RepID=DPOLN_H... 434 e-120 UniRef50_B4AHF3 DNA polymerase I n=1 Tax=Bacillus pumilus ATCC 7... 433 e-119 UniRef50_C0E6N1 Putative uncharacterized protein n=1 Tax=Coryneb... 428 e-118 UniRef50_UPI0000D572BA PREDICTED: similar to DNA polymerase thet... 427 e-118 UniRef50_B4KC49 GI21961 n=1 Tax=Drosophila mojavensis RepID=B4KC... 427 e-117 UniRef50_O75417 DNA polymerase theta n=30 Tax=Deuterostomia RepI... 427 e-117 UniRef50_Q1ARA6 DNA polymerase I n=1 Tax=Rubrobacter xylanophilu... 426 e-117 UniRef50_A9U2H4 Predicted protein n=1 Tax=Physcomitrella patens ... 425 e-117 UniRef50_B4NI17 GK13557 n=1 Tax=Drosophila willistoni RepID=B4NI... 425 e-117 UniRef50_B4MBB7 GJ14321 n=1 Tax=Drosophila virilis RepID=B4MBB7_... 424 e-117 UniRef50_P30314 DNA polymerase n=4 Tax=Caudovirales RepID=DPOL_B... 420 e-115 UniRef50_UPI000174344B DNA polymerase I n=4 Tax=candidate divisi... 418 e-115 UniRef50_A7AQX3 DNA polymerase I, putative n=1 Tax=Babesia bovis... 417 e-115 UniRef50_A5X572 DNA polymerase nu n=8 Tax=Euteleostomi RepID=A5X... 415 e-114 UniRef50_Q588V7 Helicase and polymerase containing protein TEBIC... 414 e-114 UniRef50_C4Z601 DNA polymerase I n=1 Tax=Eubacterium eligens ATC... 411 e-113 UniRef50_O18475 FI03732p n=5 Tax=melanogaster subgroup RepID=O18... 410 e-112 UniRef50_C3ZGQ2 DNA polymerase I n=1 Tax=Branchiostoma floridae ... 409 e-112 UniRef50_Q299V6 GA19301 n=2 Tax=pseudoobscura subgroup RepID=Q29... 407 e-111 UniRef50_UPI000180C99B PREDICTED: similar to DNA polymerase thet... 406 e-111 UniRef50_B3M1V8 GF17871 n=1 Tax=Drosophila ananassae RepID=B3M1V... 403 e-110 UniRef50_D0MZ95 DNA polymerase I, putative n=2 Tax=Phytophthora ... 402 e-110 UniRef50_B3LAQ1 POM1 homolog, putative n=1 Tax=Plasmodium knowle... 402 e-110 UniRef50_A5K1B5 POM1, putative n=1 Tax=Plasmodium vivax RepID=A5... 400 e-109 Sequences not found previously or not previously below threshold: >UniRef50_Q9F173 DNA polymerase I n=177 Tax=Proteobacteria RepID=DPO1_SALTY Length = 928 Score = 1300 bits (3364), Expect = 0.0, Method: Composition-based stats. Identities = 871/928 (93%), Positives = 906/928 (97%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 MVQIP+NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQY+PTHAAV Sbjct: 1 MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYQPTHAAV 60 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL 180 LAREAEK GRPVLISTGDKDMAQLVTPNITLINTMTNTILGP+EVVNKYGVPPELIIDFL Sbjct: 121 LAREAEKVGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPDEVVNKYGVPPELIIDFL 180 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGL+FRGAKTMA KL QNK Sbjct: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLTFRGAKTMAGKLAQNK 240 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 +VAYLSY+LATIKTDVELELTCEQLEVQQP A+ELLGLFKKYEFKRWTADVE+GKWLQAK Sbjct: 241 DVAYLSYKLATIKTDVELELTCEQLEVQQPIADELLGLFKKYEFKRWTADVESGKWLQAK 300 Query: 301 GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDS 360 GAKPAAKPQET V DE+P A +SY+NYVTILD+ TL++WI KL+KAPVFAFDTETDS Sbjct: 301 GAKPAAKPQETVVIDESPSEPAAALSYENYVTILDDVTLESWIEKLKKAPVFAFDTETDS 360 Query: 361 LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN 420 LDNI+ANLVGLSFAIEPGVAAY+PVAHDYLDAPDQISR+RALELLKPLLEDEK KVGQN Sbjct: 361 LDNIAANLVGLSFAIEPGVAAYVPVAHDYLDAPDQISRQRALELLKPLLEDEKVRKVGQN 420 Query: 421 LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG 480 LKYDRG+L NYGIELRGIAFDTMLESYILNSVAGRHDMDSL++RWLKHKTITFE+IAGKG Sbjct: 421 LKYDRGVLQNYGIELRGIAFDTMLESYILNSVAGRHDMDSLSDRWLKHKTITFEDIAGKG 480 Query: 481 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI 540 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWP+LQ+HKGPLNVFENIEMPLVPVLSR+ Sbjct: 481 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPELQQHKGPLNVFENIEMPLVPVLSRV 540 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK 600 ERNGVKIDP VLH HSEE+TLRLAELEKKAH+IAGE FNLSSTKQLQTILFEKQGIKPLK Sbjct: 541 ERNGVKIDPAVLHKHSEEITLRLAELEKKAHDIAGEAFNLSSTKQLQTILFEKQGIKPLK 600 Query: 601 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH Sbjct: 601 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRD 720 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY+IVSADYSQIELRIMAHLSRD Sbjct: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYLIVSADYSQIELRIMAHLSRD 720 Query: 721 KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 KGLLTAFAEGKDIHRATAAEVFGLPL++VT EQRRSAKAINFGLIYGMSAFGL+RQLNIP Sbjct: 721 KGLLTAFAEGKDIHRATAAEVFGLPLDSVTGEQRRSAKAINFGLIYGMSAFGLSRQLNIP 780 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETL+GRRLYLPDIKSSN ARRA AE Sbjct: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLEGRRLYLPDIKSSNAARRAGAE 840 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDD+DAVAK+I Sbjct: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDLDAVAKRI 900 Query: 901 HQLMENCTRLDVPLLVEVGSGENWDQAH 928 HQLMENCTR+DVPLLVEVGSGENWDQAH Sbjct: 901 HQLMENCTRIDVPLLVEVGSGENWDQAH 928 >UniRef50_P43741 DNA polymerase I n=222 Tax=cellular organisms RepID=DPO1_HAEIN Length = 930 Score = 1153 bits (2983), Expect = 0.0, Method: Composition-based stats. Identities = 589/932 (63%), Positives = 712/932 (76%), Gaps = 6/932 (0%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 M QI NPL+LVDGSSYLYRA+HAFP LTN+AGEPT AMYGVLNML+SLI Q +PTH AV Sbjct: 1 MAQIATNPLVLVDGSSYLYRAFHAFPSLTNAAGEPTSAMYGVLNMLKSLISQVQPTHIAV 60 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 VFDAKGKTFRDE+FE YKSHRPPMPDDLR QI+PLH M++A+G+PLL V G+EADDVIGT Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGIEADDVIGT 120 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL 180 LA +A G+ VLISTGDKDMAQLV NI LINTM N++L + V+ KYG+PPELIID+L Sbjct: 121 LALQASSLGKKVLISTGDKDMAQLVDDNIMLINTMNNSLLDRKGVIEKYGIPPELIIDYL 180 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 ALMGDS+DNIPGV GVGEKTA LLQG+G + +YA EK+A L RGAK + KL K Sbjct: 181 ALMGDSADNIPGVAGVGEKTALGLLQGIGSMAEIYANLEKVAELPIRGAKKLGEKLLAEK 240 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 A LSY LATIKTDVEL +T +QL + + ++L+ F +YEFKRW +V G + Sbjct: 241 NNADLSYTLATIKTDVELNVTTDQLLLGESQKDQLIEYFARYEFKRWLNEVMNGADSITQ 300 Query: 301 GAKPAAKPQE---TSVADEAPEVTAT-VISYDNYVTILDEETLKAWIAKLEKAPVFAFDT 356 + K + TS A E T I Y T+L + L WI KL A + A DT Sbjct: 301 TTEQPVKMNQYKATSQDQSAVENTPKIQIDRTKYETLLTQADLTRWIEKLNAAKLIAVDT 360 Query: 357 ETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALK 416 ETDSLD +SANLVG+SFA+E G AAY+P+ DYLDAP + + AL +KP+LE+ K Sbjct: 361 ETDSLDYMSANLVGISFALENGEAAYLPLQLDYLDAPKTLEKSTALAAIKPILENPNIHK 420 Query: 417 VGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEI 476 +GQN+K+D I A +GIEL+G+ FDTML SY LNS GRH+MD LA+R+L H+TI FE + Sbjct: 421 IGQNIKFDESIFARHGIELQGVEFDTMLLSYTLNST-GRHNMDDLAKRYLGHETIAFESL 479 Query: 477 AGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPV 536 AGKGK+QLTFNQI LE+A YAAEDADVT++L +W LQ+ + +++ +E+PL+ V Sbjct: 480 AGKGKSQLTFNQIPLEQATEYAAEDADVTMKLQQALWLKLQEEPTLVELYKTMELPLLHV 539 Query: 537 LSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGI 596 LSR+ER GV ID L S E+ RL LEK+A+ +AG+ FNL+STKQLQ ILF+K + Sbjct: 540 LSRMERTGVLIDSDALFMQSNEIASRLTALEKQAYALAGQPFNLASTKQLQEILFDKLEL 599 Query: 597 KPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVH 656 L+KTP GAPST+EEVLEEL+ + LPK+++++RGL+KLKSTYTDKLP M+N +TGRVH Sbjct: 600 PVLQKTPKGAPSTNEEVLEELSYSHELPKILVKHRGLSKLKSTYTDKLPQMVNSQTGRVH 659 Query: 657 TSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAH 716 TSYHQAVTATGRLSS+DPNLQNIP+RNEEGR IRQAFIA E Y IV+ADYSQIELRIMAH Sbjct: 660 TSYHQAVTATGRLSSSDPNLQNIPIRNEEGRHIRQAFIAREGYSIVAADYSQIELRIMAH 719 Query: 717 LSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQ 776 LS D+GL+ AF++GKDIHR+TAAE+FG+ L+ VTSEQRR+AKAINFGLIYGMSAFGL+RQ Sbjct: 720 LSGDQGLINAFSQGKDIHRSTAAEIFGVSLDEVTSEQRRNAKAINFGLIYGMSAFGLSRQ 779 Query: 777 LNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARR 836 L I R +AQKYMDLYF+RYP V ++M R +AK QGYVETL GRRLYLPDI SSN RR Sbjct: 780 LGISRADAQKYMDLYFQRYPSVQQFMTDIREKAKAQGYVETLFGRRLYLPDINSSNAMRR 839 Query: 837 AAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAV 896 AER AINAPMQGTAADIIKRAMI +D ++ P + MIMQVHDELVFEV + V Sbjct: 840 KGAERVAINAPMQGTAADIIKRAMIKLDEVIR-HDPDIEMIMQVHDELVFEVRSEKVAFF 898 Query: 897 AKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 +QI Q ME L VPL+VEVG G+NWD+AH Sbjct: 899 REQIKQHMEAAAELVVPLIVEVGVGQNWDEAH 930 >UniRef50_Q9HT80 DNA polymerase I n=9 Tax=Gammaproteobacteria RepID=DPO1_PSEAE Length = 913 Score = 1118 bits (2892), Expect = 0.0, Method: Composition-based stats. Identities = 575/929 (61%), Positives = 698/929 (75%), Gaps = 20/929 (2%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + Q PL+LVDGSSYLYRA+HA PPLT S G+PTGA+ GVLNML SL QY + AVVFD Sbjct: 1 MSQAPLVLVDGSSYLYRAFHALPPLTTSTGKPTGAVKGVLNMLLSLRKQYPDSPFAVVFD 60 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 AKG TFRDELF YK++RP MPDDLR Q+EPLHA V+A+GLPLL V GVEADDVIGTLAR Sbjct: 61 AKGPTFRDELFAEYKANRPSMPDDLRVQVEPLHASVRALGLPLLCVEGVEADDVIGTLAR 120 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALM 183 + A RPV+ISTGDKDMAQLV +ITL+NTMT + L + V K+GV PELIIDFLALM Sbjct: 121 SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSRLDVDGVKEKFGVGPELIIDFLALM 180 Query: 184 GDSSDNIPGVPGVGEKTAQALLQGLGGL-DTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 GD DNIPGVPGVGEKTA LL G+GG + LYA +K+ L RGAK + AKLE+N+E Sbjct: 181 GDKVDNIPGVPGVGEKTALGLLTGVGGGLEVLYASLDKVPELPIRGAKGLPAKLEENREQ 240 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A+LSYQLATIKTDVEL++ ++L +P E L+ L+++ EFK W D+ Sbjct: 241 AFLSYQLATIKTDVELDVEIDKLYPGEPQREALIALYRELEFKNWLDDLL---------- 290 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 +E A E E + + +Y +LD+ AW+ KLE+A + AFDTET S+D Sbjct: 291 ------REAKEAGENGEAETPIQAEVDYDVVLDQAGFDAWLKKLEEAELIAFDTETTSID 344 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 A +VG+SFA++ G AAY+P+AH Y+ P+Q+ R+ L LKPLLED K LKVGQ+ K Sbjct: 345 AQQAQVVGVSFAVKEGEAAYVPLAHSYMGVPEQLDRDAVLRALKPLLEDPKKLKVGQHAK 404 Query: 423 YDRGILANYG--IELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG 480 YD +LAN I LRG+A+DTMLESY+L+S A RHDMDSLA ++L H TI FE+IAGKG Sbjct: 405 YDINVLANASTPIALRGVAYDTMLESYVLDSTATRHDMDSLALKYLGHSTIRFEDIAGKG 464 Query: 481 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI 540 QLTF+QIA+E+AG YAAEDADVTL+LH +W L+ V +IEMPLVPVL+RI Sbjct: 465 AKQLTFDQIAIEQAGPYAAEDADVTLRLHQALWQKLEAIPSLARVLTDIEMPLVPVLARI 524 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK 600 ERNG +D +L S EL ++ LE++A+++AG+EFNL S KQL IL++K G+ L Sbjct: 525 ERNGALVDANLLGIQSRELGEKMVALERQAYDLAGQEFNLGSPKQLGAILYDKLGLPVLS 584 Query: 601 KTPGGAPSTSEEVLEELAL-DYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 KT G PST+E VL ELA D+ LPKVI++YR ++KLKSTYTD+LP INP+TGR+HTSY Sbjct: 585 KTATGQPSTAEAVLAELAEQDFELPKVIMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSY 644 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSR 719 HQAV ATGRLSS+DPNLQNIP+R EGRRIRQAF+AP+ Y +++ADYSQIELRIMAHL++ Sbjct: 645 HQAVAATGRLSSSDPNLQNIPIRTAEGRRIRQAFVAPQGYKLLAADYSQIELRIMAHLAK 704 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 D GLL AF D+HRATAAEVFG+PLE V+ +QRRSAKAINFGLIYGMSAFGLA+Q+ + Sbjct: 705 DDGLLDAFRHDLDVHRATAAEVFGVPLEDVSGDQRRSAKAINFGLIYGMSAFGLAKQIGV 764 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 RKEAQ Y+D YF RYPGVL YMERTRAQA EQG+VETL GRRLYLP+I S NGA R AA Sbjct: 765 ERKEAQAYIDRYFARYPGVLAYMERTRAQAAEQGFVETLFGRRLYLPEIHSKNGAMRKAA 824 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 ER AINAPMQGTAADI+KRAM+AVD WLQ R+I+QVHDELV EV +D V+ V + Sbjct: 825 ERTAINAPMQGTAADIMKRAMVAVDNWLQESGLDARVILQVHDELVLEVREDLVEQVCEG 884 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWDQAH 928 I LM LDVPL+VE G G NWD+AH Sbjct: 885 IRPLMSGAATLDVPLVVEAGVGSNWDEAH 913 >UniRef50_Q65W28 PolA protein n=42 Tax=Bacteria RepID=Q65W28_MANSM Length = 965 Score = 1115 bits (2884), Expect = 0.0, Method: Composition-based stats. Identities = 591/958 (61%), Positives = 721/958 (75%), Gaps = 32/958 (3%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 M QI QNPL+LVDGSSYLYRA+HAFPPLTNS GEPTGAM+GVLNML+SLI Q +P+H AV Sbjct: 10 MAQIAQNPLVLVDGSSYLYRAFHAFPPLTNSLGEPTGAMFGVLNMLKSLITQVQPSHIAV 69 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 VFDAKGKTFRDELFE YKSHRPPMPDDLR QI+PLH +++A+G+PLL++ GVEADDVIGT Sbjct: 70 VFDAKGKTFRDELFEQYKSHRPPMPDDLRKQIQPLHDIIRALGIPLLSIEGVEADDVIGT 129 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL 180 LA +A AG+ VLISTGDKDMAQLV NI LINTM NT+L E V+ KYG+PPELIID+L Sbjct: 130 LALQASSAGKKVLISTGDKDMAQLVDDNIMLINTMNNTLLDREGVIEKYGIPPELIIDYL 189 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 ALMGDSSDNIPG+ GVGEKTA LLQG+G + +YA +K+A L RGAK + KL K Sbjct: 190 ALMGDSSDNIPGISGVGEKTALGLLQGIGSMAEIYANLDKVADLPIRGAKKLGEKLAAAK 249 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 A LSY LATIKTDVEL+L EQL + +EL+ F +YEFKRW + + K Sbjct: 250 ADADLSYVLATIKTDVELDLNPEQLIIGTANKDELIEYFARYEFKRWLNEALNDESSVTK 309 Query: 301 GAKPAAKPQETSVAD-----EAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFD 355 + A K E+ + I Y T+ ++ L+ WI K+ + + A D Sbjct: 310 PQEQAVKINNYQATPALAKQESAVKNSVKIDRTLYETVDNQAKLQQWIEKIRQVKLVAVD 369 Query: 356 TETDSLDNISANLVGLSFAIEPGVAAYIPVAH-------------------------DYL 390 TET++LD + A LVG+SFA+E G A YIP+AH + Sbjct: 370 TETNALDPMLAELVGISFALENGEACYIPLAHVHQVAAQAENAQGDLFAESEQSSESRWE 429 Query: 391 DAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILN 450 Q+++ L LKPLLE+ + K+GQN+KYD I AN GI ++G+ FDTMLESY+LN Sbjct: 430 PVVGQLNKAECLSQLKPLLENPEIKKIGQNIKYDLTIFANNGINMQGVTFDTMLESYVLN 489 Query: 451 SVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHL 510 S GRH+MD LAER+L H TI FE+IAGKGKNQLTF+QI L++A YAAEDADVT++LH Sbjct: 490 ST-GRHNMDDLAERYLGHHTIAFEDIAGKGKNQLTFDQIELKKAAEYAAEDADVTMKLHQ 548 Query: 511 KMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKA 570 +W ++ + + +++ +E+PLV VLSRIERNGV ID + L S+E + +L LE KA Sbjct: 549 TLWREVAQSPELVKLYQEMELPLVSVLSRIERNGVLIDSRALLAQSKEFSQKLTALENKA 608 Query: 571 HEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEY 630 HE+AG+ FNL+STKQLQ ILF+K G+ LKKTP GAPST+EEVLEELA ++ LPK+++E+ Sbjct: 609 HELAGQHFNLASTKQLQEILFDKLGLPVLKKTPKGAPSTNEEVLEELAYEHELPKLLVEH 668 Query: 631 RGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIR 690 RGL+KLKSTYTDKLP M+N KTGRVHTSYHQAVTATGRLSS+DPNLQNIPVRNEEGRRIR Sbjct: 669 RGLSKLKSTYTDKLPQMVNRKTGRVHTSYHQAVTATGRLSSSDPNLQNIPVRNEEGRRIR 728 Query: 691 QAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVT 750 QAFIA + + +++ADYSQIELRIMAHLS DKGL AF+EGKDIHR+TAAE+FGL LE VT Sbjct: 729 QAFIARKGFKVIAADYSQIELRIMAHLSADKGLTAAFSEGKDIHRSTAAEIFGLALENVT 788 Query: 751 SEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAK 810 +EQRRSAKAINFGLIYGMS+FGL+RQL I R +AQ+YMDLYF+RYPGV +M R +AK Sbjct: 789 AEQRRSAKAINFGLIYGMSSFGLSRQLGIARGDAQRYMDLYFQRYPGVQTFMTNIREKAK 848 Query: 811 EQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAE 870 QGYVETL GRRLYLPDI+S+N RR AAER AINAPMQGTAADIIKRAMI +D + + Sbjct: 849 SQGYVETLFGRRLYLPDIQSANAMRRKAAERVAINAPMQGTAADIIKRAMIDIDKAIT-D 907 Query: 871 QPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 P + MIMQVHDELVFEV +D ++ + I LMEN +L VPL+V+VG G+NWD+AH Sbjct: 908 DPDILMIMQVHDELVFEVKEDKIEHYSALIKSLMENAAQLHVPLIVDVGVGDNWDEAH 965 >UniRef50_B9M4P2 DNA polymerase I n=3 Tax=Deltaproteobacteria RepID=B9M4P2_GEOSF Length = 891 Score = 1109 bits (2869), Expect = 0.0, Method: Composition-based stats. Identities = 420/927 (45%), Positives = 583/927 (62%), Gaps = 38/927 (4%) Query: 4 IPQNP-LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 +P+ P L L+DGSSY+YRAY+A L++ G PT A+YG + ML ++ KP H AVVF Sbjct: 1 MPEKPKLYLIDGSSYIYRAYYAIRHLSSPKGFPTNALYGFIQMLLKVVKDRKPDHLAVVF 60 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 DA TFR+E++ YK++R MPDDLR QIEP+ V+A +P+L + G EADD+IGT+A Sbjct: 61 DAGKLTFRNEIYPAYKANRSAMPDDLRLQIEPIKEAVRAFRIPVLELPGFEADDIIGTIA 120 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLAL 182 + EK G +I TGDKD+ Q+VT ++TL++TM + GP EVV ++GVPPE ++D LAL Sbjct: 121 CDCEKKGMAAVIVTGDKDLMQIVTDSVTLLDTMKDKASGPAEVVERFGVPPERVVDILAL 180 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 GDSSDNIPG+PG+GEKTA L+Q LD L + G + +L + + Sbjct: 181 AGDSSDNIPGIPGIGEKTAIKLIQEHHSLDQLLENASVVKG-------KVGERLREFADQ 233 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A LS +LATI+ +V + + P L LF++Y F ++ Sbjct: 234 ARLSRRLATIECNVPVPYSYGDFAASPPDNRLLGDLFREYGFTTLMKEL----------- 282 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 + +S D+Y TIL A + KL +FA D ET SL+ Sbjct: 283 -----------------TSVATLSSDDYRTILSAGDFSALMDKLGTQSIFAIDLETTSLN 325 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 A +VG+SF+ A YIPVAH YL PDQ+S L+ L+PLL D K+GQN+K Sbjct: 326 PFEAEIVGISFSFSDHQAYYIPVAHHYLGVPDQLSLAHVLQALRPLLLDPAIKKIGQNIK 385 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 YD +L GIE+ GI DTML SY+LN H +++LA L HK I++ ++AG GK+ Sbjct: 386 YDYQVLRRAGIEMEGIWCDTMLASYLLNPNRSSHGLNALAVELLDHKMISYADVAGSGKD 445 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 Q F Q+ +E+A Y+ EDAD T LH P +++ G + +EMPLV +L+ +E Sbjct: 446 QKNFAQVEVEKASIYSCEDADATWLLHKLFLPQIEES-GMERLLFELEMPLVKILAEMEL 504 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 GVK+D +L S +LAELE++ + AG FN++S KQL +LFE + KKT Sbjct: 505 YGVKLDLVLLQKLSAGFGSQLAELEREIFQCAGTTFNINSPKQLGEVLFEHLQLPCGKKT 564 Query: 603 PGGA-PSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 ST+ + LE LA ++ + ++IL+YR L+KLKSTYTD LP ++ ++GR+HTSY+Q Sbjct: 565 KTKTGWSTNVDELERLAAEHEIGRLILQYRSLSKLKSTYTDALPKLVYSESGRIHTSYNQ 624 Query: 662 AVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDK 721 AVT TGRLSS++PNLQNIP+R+EEGR IR AFIA E +I+SADYSQIELR++AHLS+D+ Sbjct: 625 AVTNTGRLSSSEPNLQNIPIRSEEGRSIRHAFIAEEGCLILSADYSQIELRVLAHLSQDR 684 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 AFA+ +DIH TAAEVFGL VT E RR AK INFG+IYG F LA++L + Sbjct: 685 VFCDAFAKDEDIHTRTAAEVFGLFPGMVTPEMRRQAKTINFGVIYGQGPFSLAKELGVST 744 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 K A++++D YF+R+ G +++ +A+ +G+V T+ GRRL +PDI S+NG R+ A+R Sbjct: 745 KVAKEFIDNYFDRHAGARVFLDGCVREAEAKGHVTTILGRRLPIPDINSTNGNIRSFAQR 804 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 AIN P+QG+AADIIK+AM+ V ++ E + R+IMQVHDELVFEV ++ + K + Sbjct: 805 NAINYPIQGSAADIIKQAMVRVSGRMRREGLKSRLIMQVHDELVFEVPLEEKLTMEKLVC 864 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQAH 928 MEN L VPL V+V G NW +AH Sbjct: 865 HEMENALTLRVPLKVDVNFGSNWSEAH 891 >UniRef50_A1ASW3 DNA polymerase I n=12 Tax=Deltaproteobacteria RepID=A1ASW3_PELPD Length = 893 Score = 1096 bits (2835), Expect = 0.0, Method: Composition-based stats. Identities = 422/925 (45%), Positives = 583/925 (63%), Gaps = 39/925 (4%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 + L LVDGSSY+YRAY+A L++ G PT +YG ML L+ +++P H AVVFD Sbjct: 5 DTLYLVDGSSYIYRAYYAIRHLSSPTGHPTNTIYGFTQMLLKLLKEHQPRHVAVVFDVGR 64 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 +TFR EL+ YK++R +PDDLR Q+ P+ +V+A +P L ++G EADD+IG LA Sbjct: 65 ETFRTELYPDYKANRAALPDDLRVQMGPIRDLVRAFNIPALELAGFEADDIIGCLAARFS 124 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDS 186 G V+I TGDKD+ Q+VT +TL++TM +V+ ++GV P L+ D L L GD+ Sbjct: 125 ATGGRVVIVTGDKDLMQIVTERVTLLDTMKEKRSAITDVIERFGVEPRLVTDILGLAGDA 184 Query: 187 SDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLS 246 SDNIPGVPG+GEKTA L++ G LD L ++ G KL + ++ A LS Sbjct: 185 SDNIPGVPGIGEKTAMKLIREYGSLDQLLERASEVKG-------KNGEKLREFRDQALLS 237 Query: 247 YQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAA 306 +LATI+ DV +++ E+L Q+P E L LF+ Y F ++ Sbjct: 238 RRLATIRCDVPIQVELEELASQEPDREALNTLFRLYGFTTLIKELTGR------------ 285 Query: 307 KPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISA 366 + +S + Y T+ +E L+ + LE++ FA D ET SLD A Sbjct: 286 ----------------STLSSEGYCTVTAQEELEELVHALERSEEFAIDLETTSLDPRDA 329 Query: 367 NLVGLSFAIEPGVAAYIPVAH--DYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYD 424 +VGLSF+ A YIPV H D P Q+ R+ LE L+P LE K+GQN+K+D Sbjct: 330 EIVGLSFSFRDHQAWYIPVGHTSDAGLQPGQLPRDLVLERLRPQLESPSPTKIGQNIKFD 389 Query: 425 RGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQL 484 +LA G+ L GI FDTML SY+LN H +D+LA L H+ I++ E+ G GK Q Sbjct: 390 MQVLATNGVSLSGIRFDTMLASYVLNPSRQGHGLDALALEHLGHRMISYAEVTGSGKTQK 449 Query: 485 TFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNG 544 F+Q+ +E A RYA EDAD T LH K P L ++ G +F IEMPLVP+L+ +E +G Sbjct: 450 NFSQVEIETASRYACEDADATWLLHRKFSPLLAEN-GVEELFHRIEMPLVPILAGMENHG 508 Query: 545 VKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG-IKPLKKTP 603 V +D ++L + S + + R+A LE + ++AG FNL+S KQL +LFE+ K Sbjct: 509 VLLDIRLLADLSRDFSSRMATLEGRIFQLAGTTFNLNSPKQLGEVLFERLQLKTGKKTKG 568 Query: 604 GGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAV 663 ST EVL LA ++ + ++IL+YRGL+KLKSTY+D LP +++P+TGRVHTSY+Q V Sbjct: 569 KTGWSTDNEVLSSLAEEHEIARLILDYRGLSKLKSTYSDALPRLVHPRTGRVHTSYNQTV 628 Query: 664 TATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGL 723 T+TGRLSS+DPNLQNIP+R++EGR IR AFIAP +VI+SADYSQIELR++AHLS D Sbjct: 629 TSTGRLSSSDPNLQNIPIRSDEGRMIRHAFIAPPGHVIISADYSQIELRVLAHLSGDPVF 688 Query: 724 LTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKE 783 AF +DIH TA+EVFGL E VT+E RR AK INFG+IYG +F LARQL I RK Sbjct: 689 CQAFEHDEDIHTRTASEVFGLFPEMVTAEMRRQAKTINFGIIYGQGSFSLARQLGIARKT 748 Query: 784 AQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAA 843 A++++ Y ER+ + +++ QA+EQG+V T+ GRRL + DI S+NG RA A+R A Sbjct: 749 AEEFISAYKERHAKAVGFLDDCIRQAEEQGFVTTILGRRLPIADITSTNGNIRAFAQRNA 808 Query: 844 INAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQL 903 IN P+QG+AADIIK AMI VD +++E + R+IMQVHDELVFEV +D++ A+ + + Sbjct: 809 INYPIQGSAADIIKSAMIRVDGRIRSEGLKSRLIMQVHDELVFEVREDELLAMELLVEEE 868 Query: 904 MENCTRLDVPLLVEVGSGENWDQAH 928 M L +PL V++ G NW +AH Sbjct: 869 MSRAVELRIPLKVDISHGVNWSEAH 893 >UniRef50_A0LCQ8 DNA polymerase I n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LCQ8_MAGSM Length = 911 Score = 1079 bits (2792), Expect = 0.0, Method: Composition-based stats. Identities = 426/927 (45%), Positives = 570/927 (61%), Gaps = 18/927 (1%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + L L+DGS YLYRA+ LT G PT A++G + MLR +I KP + FD Sbjct: 1 MTTQRLFLIDGSGYLYRAFFGVRNLTRRDGFPTNAIFGFIKMLRKVIEDEKPDFVTIAFD 60 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 K TFR + YK++R PMPD+LR QI +H ++ A +P +A+ G EADD+IGT AR Sbjct: 61 TKAPTFRHTMDAQYKANRKPMPDELRVQIPVIHDVIDAFNIPRIALEGYEADDIIGTFAR 120 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALM 183 AG V++ +GDKD+ QL+TP + + + + GPE+VV +GV E I D L L Sbjct: 121 LGCAAGVEVVVVSGDKDLMQLITPQVKMFDGSKDKWYGPEDVVESWGVAAERIPDLLGLA 180 Query: 184 GDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVA 243 GD+SDNIPGV G+G KTA L+ G L+ + E+I L + + A Sbjct: 181 GDTSDNIPGVGGIGPKTAAQLIAEFGSLEGVLHGAERIK------QPKRRTALLEQADTA 234 Query: 244 YLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAK 303 S QLATI +V L + +Q+P L +++ F EA K LQA G++ Sbjct: 235 RRSLQLATINREVPLPFDLQGARMQRPNWARLREIYQDMSFATLAR--EAEKQLQALGSE 292 Query: 304 PAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDN 363 A Q + + P + NY I E +A++ +L+ P FA DTET L Sbjct: 293 AAPSIQIETQPESLP-------NQPNYQVITSEAAFQAFMEQLKGLPRFAVDTETTDLHP 345 Query: 364 ISANLVGLSFAIEPGVAAYIPVAHDYLDAPD-QISRERALELLKPLLEDEKALKVGQNLK 422 SA LVG+S A +P VA YIPV H AP+ Q+ R L LKPLLE + K GQN+K Sbjct: 346 HSAELVGISIAWQPMVAYYIPVGHALDAAPEGQLPRADVLAALKPLLESPEIGKTGQNIK 405 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 YD I Y I ++GI D+ML SY+L H++D++A L TI FE++AGKG+ Sbjct: 406 YDYQIFKRYHITMQGIERDSMLYSYLLYGANRAHNLDAIATEELGRTTIKFEDVAGKGRK 465 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 ++ F+Q+ L A YA EDA+VT Q M P+L + G ++E IE PL+PVL+ +E Sbjct: 466 RIRFDQVPLHLAAPYACEDAEVTWQAAASMAPNLDREPGLKRLYETIERPLIPVLAEMEY 525 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 GV +D VL S + + R A L ++ HE+AGE FN++ST+QL ILFEK GIK K+T Sbjct: 526 AGVLVDRDVLSTMSADFSKRRARLVEEIHELAGEVFNVNSTQQLGHILFEKMGIKGGKRT 585 Query: 603 PGGAPSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 G ST VL +LA D +P+ +L YR L KL+STYTD L +I+P TGRVHTSY+Q Sbjct: 586 KSG-FSTDVSVLSKLADDGEKIPQQVLAYRSLTKLQSTYTDALVALIHPYTGRVHTSYNQ 644 Query: 662 AVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDK 721 AVT TGRLSS+DPNLQNIP+R EEGR IR AFIAP + +++ADYSQIELR++AH+ Sbjct: 645 AVTLTGRLSSSDPNLQNIPIRTEEGRAIRTAFIAPAGWSLLAADYSQIELRVLAHMGNVS 704 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 L AF G DIH ATAAE+FG+PL VT E RR AK INFGL+YGMS FGLA++L I Sbjct: 705 RLKEAFHAGLDIHAATAAELFGVPLAQVTGEHRRMAKTINFGLVYGMSPFGLAKRLGIQN 764 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 EA+ YMDLYF RY GV ++M+ T A+ G+VETL GRR + DI ++ + R AER Sbjct: 765 NEARAYMDLYFARYDGVRQHMDATIRDARAHGFVETLGGRRCPIRDINATQRSLREFAER 824 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 AINAP+QG+A+D+IK AMI + LQA + RM++QVHDELV EV ++ AV + + Sbjct: 825 TAINAPLQGSASDLIKLAMIRLHGALQAGGFKARMVLQVHDELVLEVPDKELAAVKEVVR 884 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQAH 928 ME L +PL+V++G G+NW +AH Sbjct: 885 SCMEGVMTLSIPLVVDMGVGQNWGEAH 911 >UniRef50_Q0F0N6 DNA polymerase I n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0N6_9PROT Length = 917 Score = 1077 bits (2785), Expect = 0.0, Method: Composition-based stats. Identities = 449/927 (48%), Positives = 585/927 (63%), Gaps = 18/927 (1%) Query: 7 NPLILVDGSSYLYRAYHAFP-PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 L+L+DG +Y++RA+HA LTNS GEPT A++G + MLRS++ + PTH AV FD K Sbjct: 2 PHLVLIDGPNYVFRAFHAVRHNLTNSKGEPTNAVFGYVQMLRSILKELGPTHVAVAFDPK 61 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 G TFR+ ++ YK+HRPPMP+DL AQ + + A L + V EADDVI TLAR+A Sbjct: 62 GGTFRNRMYADYKAHRPPMPEDLAAQWPSIFDVTDAFRLNRICVEDYEADDVIATLARQA 121 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185 E G V I + DKD+ QLV I +++TM GPEEV ++GV P+ I D LAL GD Sbjct: 122 EARGWDVSIVSTDKDLMQLVGERIWMLDTMKRKDYGPEEVKERWGVGPDRIQDLLALAGD 181 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 S+DNIPGVPG+G KTA LL+ G L+ + +I + L + + A L Sbjct: 182 SADNIPGVPGIGPKTAVTLLEAYGDLEGVLTRAGEIK------QQKRRENLIEFADDARL 235 Query: 246 SYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPA 305 SY+L + V L + + L V +P E L LF + EF+R A+ + P Sbjct: 236 SYRLVALDEQVPLPIELDDLAVTEPDRERLAELFTRLEFRRMLAEFSGPAAIDTP-VVPQ 294 Query: 306 AKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNIS 365 AKP E T ++ + DE TL++ +A+L A + A DTET SL Sbjct: 295 AKPAEPVRT-----STPATVTPRIDRLVNDETTLQSLLAELSSAELIALDTETTSLQAHD 349 Query: 366 ANLVGLSFAIEPGVAAYIPVAHDYLD----APDQISRERALELLKPLLEDEKALKVGQNL 421 A LVGLSFA G A YIPV H D AP Q+ + L LKPLLED K G NL Sbjct: 350 AELVGLSFATRAGEAWYIPVGHRSTDLLVPAPQQLPLQHVLAALKPLLEDAAKRKCGHNL 409 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 KYD +L GIEL GIA D+ML +Y L +DS+AE +L + + E+AGKG Sbjct: 410 KYDAQVLRRAGIELAGIAADSMLLAYCLYPAKYPPSLDSVAEDYLNYHCTPYSEVAGKGA 469 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 Q+ F+++ + A YA EDAD+ L+L + L G L + IE+PL VL+ IE Sbjct: 470 KQVCFDEVPVSIATPYACEDADIALRLTGLLSAQLLTE-GRLTRHDEIELPLSQVLADIE 528 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 G +D ++L S LR+AELE + H AGE+FN+ S KQL +LFE I KK Sbjct: 529 WTGAHVDAEMLAGLSTGFGLRIAELESQIHAAAGEKFNIQSPKQLGVLLFETLAIPGGKK 588 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 T G +T +EVLE+LA ++ +P++IL+ R LAKLKSTYTD LP +I+ TGRVHTS++Q Sbjct: 589 TKSGQWATGQEVLEKLADEHEVPRLILQVRQLAKLKSTYTDALPKLIHRTTGRVHTSFNQ 648 Query: 662 AVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDK 721 A+T TGRLSS+DPNLQNIP+R+ EGR IR+AFIA E + +++ADYSQIELR+MAH S D Sbjct: 649 AITTTGRLSSSDPNLQNIPIRSAEGREIRKAFIAEEGHTLLAADYSQIELRLMAHFSGDA 708 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 L AFA G+DIH ATAA V G+ LE V+ E RR AKAINFG++YGMSAFGLA+QLNI R Sbjct: 709 ALCAAFANGEDIHAATAAAVNGIALEDVSGEMRRRAKAINFGILYGMSAFGLAKQLNISR 768 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 EAQ ++D YFERYP V +M+ T A+EQGYVETL G R+Y+P+I SSNG RRA AER Sbjct: 769 GEAQTFIDTYFERYPSVRGFMDDTLVLAREQGYVETLLGHRVYVPEISSSNGMRRAYAER 828 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 AINAP+QG+AADIIK AMI + L+ E P +I+QVHDEL+ E D +DAV+ + Sbjct: 829 TAINAPLQGSAADIIKVAMIHLHRRLRQEAPAAAIILQVHDELIVEAPVDQIDAVSAIMR 888 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQAH 928 Q ME L+VPL V++GSG +W AH Sbjct: 889 QTMEQAVTLEVPLTVDIGSGHSWYDAH 915 >UniRef50_Q6X9Q9 DNA polymerase I n=1 Tax=Spirochaeta thermophila RepID=Q6X9Q9_9SPIO Length = 897 Score = 1072 bits (2772), Expect = 0.0, Method: Composition-based stats. Identities = 410/926 (44%), Positives = 584/926 (63%), Gaps = 34/926 (3%) Query: 7 NPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 PL L+D +YRAY A P+ G T A+YG ML + +Y P + VV D+ Sbjct: 2 KPLFLIDAYGLIYRAYFALIRAPMRTKDGRNTSAIYGFFRMLFRFVKEYDPVYCGVVLDS 61 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 TFR++ FE YK+ R P+DL QI + +++A+G + ++G EADDV+GTLA Sbjct: 62 LTPTFREKTFEAYKATRQKTPEDLHPQIPVIEEILEALGFATVRMNGFEADDVMGTLAAM 121 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTN--TILGPEEVVNKYGVPPELIIDFLAL 182 A+ GRP + +GDKD+AQLVT + ++ + +L E V K+GV + I+DFLAL Sbjct: 122 AQAEGRPCFVVSGDKDLAQLVTKGVKIVRMDKDDFVVLDEEGVKEKWGVRADQIVDFLAL 181 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 +GD+SDNIPGV G+GEKTAQ LL G L+ +YA ++++ ++ KLE+ +E Sbjct: 182 VGDASDNIPGVEGIGEKTAQRLLAEYGSLEGVYAHLDELS-------PSLRRKLEEGRER 234 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A+LS LATI+TD++L LT L ++P + LF Y+ + +V G Sbjct: 235 AFLSRDLATIRTDLDLSLTIGDLRRREPEVQRARELFLAYDIRSLAQEV---------GG 285 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 P+ + T EV + +Y + D +L W+ + + A DTETD LD Sbjct: 286 SPSVGEKPTL------EVEGPSRAGVSYEVVTDRASLSRWVEEALERGAVAVDTETDGLD 339 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 ++ LVG+SFA++ G A Y+P+A + + + E+L PLL + +KVGQNLK Sbjct: 340 PLTCRLVGVSFAVDEGRACYVPLAAPDVRP---LPADVVREVLSPLLVSTEVVKVGQNLK 396 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 +D +L +G+ G FDTM+ +++L S AGR+++D LAE++L +TI ++++ KG Sbjct: 397 FDYHVLRRWGVRPEGPFFDTMVAAWLLESDAGRYNLDRLAEKYLGWRTIHYKDVVEKGA- 455 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 +F + + EAG YAAEDAD+ L+L + L+ G VF +EMPL+ +L+R+E Sbjct: 456 --SFETVPVAEAGVYAAEDADIALRLSRVLKERLEAE-GLGRVFYEMEMPLLSILARMEE 512 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 G+ +D + L EL R++ +EK+ E+ G EFN+ STKQLQ +LF ++G+ P+KKT Sbjct: 513 WGIGLDGEALSAFGRELEERISTIEKEIFELVGHEFNVGSTKQLQEVLFVERGLPPVKKT 572 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST VLEELA P+ +LEYR L KLK+TY D LP ++NP TGR+HT + Q Sbjct: 573 KTG-FSTDTSVLEELAARDPVAAKVLEYRSLTKLKNTYVDVLPGLVNPGTGRLHTWFSQV 631 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKG 722 TATGRLSS DPNLQNIP++ EEGRRIR+AF+ + +SADYSQIEL I+AHLS D Sbjct: 632 GTATGRLSSKDPNLQNIPIKTEEGRRIREAFVPQRGWWFLSADYSQIELVILAHLSEDPA 691 Query: 723 LLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRK 782 L AF EG+D+HRAT + +FG+P E VT EQRR AK INFG+IYGMSAF L+R+L IPRK Sbjct: 692 LCRAFREGEDVHRATGSLLFGVPPEAVTPEQRRIAKTINFGVIYGMSAFRLSRELGIPRK 751 Query: 783 EAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERA 842 EA++++D YF Y GV ++ERT A+A+E+GYV TL GR+ LP I S N ++ AER Sbjct: 752 EAERFIDAYFTTYAGVRAFIERTIAEAEEKGYVTTLFGRKRPLPYITSRNKTQKTGAERI 811 Query: 843 AINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQ 902 A+N P+QG+ ADIIK AMI +DA ++ RMI+QVHDEL+FEV ++++ + + + + Sbjct: 812 AVNTPIQGSGADIIKLAMIDLDAQMRRMGLASRMILQVHDELIFEVPPEELEVMKRLVRE 871 Query: 903 LMENCTRLDVPLLVEVGSGENWDQAH 928 ME RL VPL VE+G G NW +AH Sbjct: 872 RMEGVVRLSVPLRVEMGVGRNWGEAH 897 >UniRef50_A7HP95 DNA polymerase I n=11 Tax=Alphaproteobacteria RepID=A7HP95_PARL1 Length = 979 Score = 1069 bits (2764), Expect = 0.0, Method: Composition-based stats. Identities = 436/966 (45%), Positives = 603/966 (62%), Gaps = 52/966 (5%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTN-SAGEPTGAMYGVLNMLRSLIM----QYKPTHAAVV 61 + L LVDGS Y++RAYHA PPLT S G P GA+ G NML LI +++PTH AV+ Sbjct: 22 DHLFLVDGSGYIFRAYHALPPLTRKSDGMPVGAVAGFCNMLYKLIEDTKDEFEPTHLAVI 81 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 FDA KTFR++++ YK++R +DLR Q + +A G+P + G EADD+I T Sbjct: 82 FDAAAKTFRNDIYPEYKANRVEPSEDLRPQFALVRDATRAFGVPCIEKKGYEADDIIATY 141 Query: 122 AREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLA 181 AR A +AG V I + DKD+ QLV N+ +++TM + E+V+ K+GVPPE ++D A Sbjct: 142 ARLAHEAGARVTIVSSDKDLMQLVNDNVDMLDTMKLKTIAREQVIEKFGVPPEKVVDVQA 201 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 L GDS+DN+PGVPG+G KTA L+ G L+TL A +I + L + E Sbjct: 202 LAGDSTDNVPGVPGIGIKTAAQLIGEYGDLETLLARAGEIK------QQKRRENLIEFAE 255 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ--- 298 A +S +L + +V LE E + V++P E L+G FK EF T V + Sbjct: 256 QARISRRLVELDNNVPLEEPLEGMGVREPDPETLIGFFKDMEFNTLTRRVGERFNIDVDA 315 Query: 299 -----------------------AKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILD 335 K + A+ P+ + NYV + Sbjct: 316 IPAAGKHALITDGALAAPAGEEPKKEKQTVARTARGGTPGAVPKGIDADFNDANYVAVTA 375 Query: 336 EETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPD- 394 L WIA+ + A DTETDSL + A LVG+S ++ PG A YIP+ H D Sbjct: 376 LADLDEWIARAREQGFLAVDTETDSLFPMQARLVGVSLSLLPGEACYIPLQHGAGGGLDF 435 Query: 395 -------QISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESY 447 QI + A+ LKPLLED LK+GQNLK+D +L +GI+L+G+ DTML SY Sbjct: 436 ADAGGQPQIPLKEAIARLKPLLEDPSILKIGQNLKFDMTVLRQHGIQLKGL-DDTMLMSY 494 Query: 448 ILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQ 507 L++ H MD L+E L HK I+F E+AGKGK Q+TF+Q+ ++ A YAAEDADVTL+ Sbjct: 495 ALDAGVHGHGMDELSELHLGHKPISFAEVAGKGKAQITFDQVPVDRATAYAAEDADVTLR 554 Query: 508 LHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELE 567 L + P L + + V+E +E PLV VL+ +ER GVK+D VL S + + ++A+ E Sbjct: 555 LWHILKPRLVAERR-VTVYETLERPLVSVLAEMERAGVKVDKAVLARLSGDFSQKMAQYE 613 Query: 568 KKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALD-YPLPKV 626 + +E+AGE FN+ S KQL ILF+KQ ++ +KT GA ST + LE LA + LP+ Sbjct: 614 DEIYELAGERFNIGSPKQLGEILFDKQSLEGGRKTKTGAWSTDADTLEALAAKGHELPQR 673 Query: 627 ILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEG 686 +L++RGL+KLKSTYTD LP INP+TGR+HT Y A T+TGRL+ST+PNLQNIPVR E+G Sbjct: 674 VLDWRGLSKLKSTYTDALPEYINPETGRIHTCYSLASTSTGRLASTEPNLQNIPVRTEDG 733 Query: 687 RRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPL 746 R+IR AF+A + +++SADYSQIELR++AH++ + L AFAEG DIH TA+E+FG+P+ Sbjct: 734 RKIRTAFVAEKGNLLISADYSQIELRLLAHIADIEALKKAFAEGLDIHAMTASEMFGVPI 793 Query: 747 ETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTR 806 E + S RR AKAINFG+IYG+SAFGLA QL IPR+EA +Y+D YF+R+PG+ YM+ TR Sbjct: 794 EGMESSVRRRAKAINFGIIYGISAFGLANQLGIPRQEAGEYIDRYFKRFPGIRAYMDDTR 853 Query: 807 AQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAW 866 A + GYVET+ GRR++LP I S N A ++ ERAAINAP+QG+AADII+RAMI + Sbjct: 854 DFAHKNGYVETIFGRRIHLPAINSKNPAEKSFMERAAINAPIQGSAADIIRRAMIRMPQA 913 Query: 867 LQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMEN----CTRLDVPLLVEVGSGE 922 L + RM++QVHDEL+FEV + + + +K + ++M + L VPL V+ + + Sbjct: 914 LADAKLAARMLLQVHDELIFEVPEKEAEKTSKVVSRIMSDAAAPAVALTVPLDVDARAAK 973 Query: 923 NWDQAH 928 NWD+AH Sbjct: 974 NWDEAH 979 >UniRef50_A9ITV6 DNA polymerase I n=89 Tax=Proteobacteria RepID=A9ITV6_BORPD Length = 948 Score = 1067 bits (2760), Expect = 0.0, Method: Composition-based stats. Identities = 474/926 (51%), Positives = 624/926 (67%), Gaps = 25/926 (2%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 L+LVDGSSYLYRA+HA P L N+ GEPTGA+YGV+NMLR L+ +K +AA +FDA+ Sbjct: 45 NKTLLLVDGSSYLYRAFHAMPDLRNAQGEPTGALYGVVNMLRKLVSDHKADYAACIFDAR 104 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 GKTFRD+L+ YKSHRPPMP+DL AQIEP+H V+A+G +LA+ GVEADD+IGTLA +A Sbjct: 105 GKTFRDDLYPDYKSHRPPMPEDLAAQIEPIHQAVRALGWQVLAIEGVEADDIIGTLACQA 164 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185 G ++STGDKD+AQLV N+TL+NTM+ +L V NK+GVPP+ I+D+L L+GD Sbjct: 165 SGMGIRTIVSTGDKDLAQLVDANVTLVNTMSGEVLDETGVRNKFGVPPDRIVDYLMLVGD 224 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 + DN+PGV VG KTA L G +D+L + + I G++ L + L Sbjct: 225 AIDNVPGVAKVGPKTAAKWLAEFGSIDSLVEQADGIKGVA-------GNNLREAIGQFPL 277 Query: 246 SYQLATIKTDVELE---LTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 + QL T+K D +L + L +QP + L L+++Y F+ W ++ +G Sbjct: 278 TRQLLTVKCDCDLAGHIGGIDDLAPRQPDTDTLQALYERYGFRTWLRELTGDSQRVPQGD 337 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 + Y+ I W+A+ P+ A DTET SLD Sbjct: 338 ARVIA------------EAPAAPAELRYLIISSWPAFDEWMAQAADTPLVALDTETTSLD 385 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 + A+LVG+S A+ PGVA YIP+AH D+ +Q+ + LE ++ L+D K+ + K Sbjct: 386 EMQASLVGISMALAPGVACYIPLAHRGPDSAEQLPKREVLERMRAWLQDPARPKLLHHAK 445 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 YD + AN G+ L GI DTML++Y+L S G ++ LA+R+L IT+EE+ GKG Sbjct: 446 YDAHVFANEGVALAGIQDDTMLQAYVLESHRGV-GLNDLAQRYLGRGGITYEELCGKGAK 504 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 Q+ F+++A+E+AG YA EDAD TLQLH + P + G ++ +E+ + VL+ +ER Sbjct: 505 QIGFDEVAVEQAGHYACEDADFTLQLHHALRPRVAADAGLERIY-QLEIQVSRVLTVVER 563 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 NGVK+D L S L + +LE++A+E+AG+ FNL+S KQL ILF + + ++KT Sbjct: 564 NGVKVDAAELGRQSHRLGQEMLQLEQRAYELAGQPFNLNSPKQLGEILFGRMQLPVVRKT 623 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 GGAPST EEVL LA DYPLP+V+LEYRGL+KLKSTYTDKLP MIN +TGRVHT Y QA Sbjct: 624 AGGAPSTDEEVLTRLAQDYPLPQVLLEYRGLSKLKSTYTDKLPRMINARTGRVHTHYSQA 683 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKG 722 TGRL+S+DPNLQNIPVR E GRR+R+AF+A V+VSADYSQIELRIMAH+S D Sbjct: 684 AVVTGRLASSDPNLQNIPVRTEAGRRVREAFVAEHG-VLVSADYSQIELRIMAHVSDDAN 742 Query: 723 LLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRK 782 L AFA GKDIHRATA+E+FG+ L+ V ++QRR+AKAINFGLIYGM FGLA L I R Sbjct: 743 LQQAFAAGKDIHRATASEIFGVALDEVGADQRRAAKAINFGLIYGMGVFGLASNLGITRD 802 Query: 783 EAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERA 842 AQ Y+D YF RYPGV +YME TR A++QGYVET+ GRRL LPDI++++G RR AERA Sbjct: 803 AAQAYIDRYFARYPGVAQYMEHTRQLARQQGYVETVFGRRLQLPDIRAASGPRRQGAERA 862 Query: 843 AINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQ 902 AINAPMQGTAAD+IK AM+AV WL AE+ RMIMQVHDEL+ EV ++DAV ++ + Sbjct: 863 AINAPMQGTAADLIKMAMVAVQDWLDAERLATRMIMQVHDELILEVPDGELDAVRARLPE 922 Query: 903 LMENCTRLDVPLLVEVGSGENWDQAH 928 LM RL VPL+ EVG G NW+QAH Sbjct: 923 LMCGVARLRVPLVAEVGVGPNWEQAH 948 >UniRef50_Q21YU4 DNA polymerase I n=39 Tax=Betaproteobacteria RepID=Q21YU4_RHOFD Length = 957 Score = 1060 bits (2742), Expect = 0.0, Method: Composition-based stats. Identities = 482/954 (50%), Positives = 630/954 (66%), Gaps = 41/954 (4%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEP----TGAMYGVLNMLRSLIMQYKPTHAAVVF 62 L+LVDGSSYLYRA+HA P L G+P TGA+ G++NML+SL + +AA +F Sbjct: 13 KTLLLVDGSSYLYRAFHAMPDLRAVPGDPSSAPTGAIRGMINMLQSLRKEVPADYAACIF 72 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 D KG TFRD L+ YK+HR PMPDDLR+QIEP+H +V+ MG +LAV GVEADDVIGTLA Sbjct: 73 DDKGPTFRDALYPEYKAHRSPMPDDLRSQIEPIHEVVRLMGWKVLAVPGVEADDVIGTLA 132 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLAL 182 A + G V++S+GDKD+AQLV +IT+I+TM V ++GVPP+L++DF L Sbjct: 133 VTAARQGIEVIVSSGDKDLAQLVNSHITIIDTMNGRRRDVAGVEAEFGVPPQLMVDFQTL 192 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 +GD DN+PGVP VG KTA LQ G LD + A ++I G+ + L+++ + Sbjct: 193 VGDVIDNVPGVPKVGPKTAAKWLQEYGSLDAVVANADQIKGV-------VGENLKKSLDW 245 Query: 243 AYLSYQLATIKTDVELEL------TCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAG-- 294 L QL TIKTD +L+ + + L ++KY FK + G Sbjct: 246 LPLGRQLLTIKTDCDLDGWMPDLPALDSIATGTMDTGALAIFYEKYGFKGLARTLGGGAA 305 Query: 295 --------------KWLQAKGAKPAA------KPQETSVADEAPEVTATVISYDNYVTIL 334 K G+ P + +P + A + + ++ +Y TIL Sbjct: 306 SVASKASSGFGVGPKERSDAGSDPNSVRQLTREPGLFDEPEAASDPIPSSVTNLHYDTIL 365 Query: 335 DEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPD 394 E W+AK++ A + A DTET SLD + A +VG+SF++ PG AAYIP+AH Y DAP Sbjct: 366 TWEAFDRWLAKVQAADLVALDTETTSLDEMRAQIVGISFSVTPGEAAYIPLAHAYPDAPA 425 Query: 395 QISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAG 454 Q+ L LKP L+D K+GQ++KYDR + AN+GIE++G A DTML+SY+L V Sbjct: 426 QLPLADVLAKLKPWLQDASHKKLGQHVKYDRHVFANHGIEVQGYAHDTMLQSYVL-EVTK 484 Query: 455 RHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWP 514 H + SLAER L I+FE++ GKG NQ+ F+Q+ + +A +Y+ ED+D+TL +H +WP Sbjct: 485 PHGLASLAERHLGRSGISFEDLCGKGANQICFDQVDIAQAAQYSCEDSDMTLDVHRALWP 544 Query: 515 DLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIA 574 LQ + ++E +E+ L RIERNGV ID L S EL R+ +LEK+AHE+A Sbjct: 545 LLQANDKLRFIYE-LEIASSEALYRIERNGVLIDGPTLAVQSHELGQRILQLEKEAHELA 603 Query: 575 GEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLA 634 G+ FNLSS KQ+ I F K G+ +KKTP G+PST +EVL++LA DYPLP ILE+RGLA Sbjct: 604 GQPFNLSSPKQIAEIFFTKLGLPVVKKTPTGSPSTDDEVLQKLAEDYPLPAKILEHRGLA 663 Query: 635 KLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFI 694 KLK TYTDKL + +P+TGRVHT Y QA+ TGRLSS +PNLQNIPVR EGRR+R+AF+ Sbjct: 664 KLKGTYTDKLAQLAHPRTGRVHTHYAQAIAVTGRLSSLEPNLQNIPVRTPEGRRVREAFV 723 Query: 695 APEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQR 754 AP VI SADYSQIELRIMAH+S D LL AF +G D+HRATA+E+FG+ VTSEQR Sbjct: 724 APPGSVIASADYSQIELRIMAHISGDAALLLAFHDGIDVHRATASEIFGVDRAQVTSEQR 783 Query: 755 RSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGY 814 R AK INFGLIYGMSA+GLA+ L+I A+ Y++ YF+RYPGV YME TRA AK QGY Sbjct: 784 RYAKVINFGLIYGMSAYGLAKALSIDNTAAKNYIERYFDRYPGVKNYMEHTRALAKRQGY 843 Query: 815 VETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRV 874 VET+ GRRLYLP+I S NG RR+ AERAAINAPMQGTAAD+IK +M+ V + E+ Sbjct: 844 VETVFGRRLYLPEINSPNGPRRSGAERAAINAPMQGTAADLIKLSMVKVQQVIDEEKRAT 903 Query: 875 RMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 +MIMQVHDELVFEV + ++D V ++ +LM L VPLL EVG G NWD+AH Sbjct: 904 KMIMQVHDELVFEVPESEIDWVRHEVPRLMAGVAHLKVPLLAEVGVGANWDKAH 957 >UniRef50_B6R626 DNA polymerase I superfamily protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R626_9RHOB Length = 980 Score = 1048 bits (2711), Expect = 0.0, Method: Composition-based stats. Identities = 428/972 (44%), Positives = 584/972 (60%), Gaps = 57/972 (5%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNS-AGEPTGAMYGVLNMLRSLIMQ-------YKPTH 57 + LIL+DGS++++RAYHA PPLT G P GA+ G NML ++ + +PTH Sbjct: 17 NDHLILIDGSTFIFRAYHALPPLTRKPDGLPVGAVSGFCNMLWKMMQEGPTKEEGDEPTH 76 Query: 58 AAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDV 117 AV+FD GKTFR++ + YK+HRPP P+DLR Q + +A G+P + G EADD+ Sbjct: 77 FAVIFDKSGKTFRNDFYPEYKAHRPPPPEDLRPQFGLIRQATRAFGVPAIEQQGYEADDL 136 Query: 118 IGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELII 177 I T AR+AE G V I +GDKD+ QLVT I +++TM N I+G EV K+GV PE ++ Sbjct: 137 IATYARQAEAQGARVTIVSGDKDLMQLVTDKIGMVDTMKNKIIGKPEVFEKFGVGPEKVV 196 Query: 178 DFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLE 237 + +L GDS DN+PGVPG+G KTA L+ G LDTL + E I K L Sbjct: 197 EVQSLAGDSVDNVPGVPGIGLKTAALLINEFGDLDTLLEQAETIK------QKKRRENLI 250 Query: 238 QNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWL 297 + E A +S +L ++ V +E E V + +G K F T V Sbjct: 251 EFAEQARISKRLVQLEEAVPVETPVEDFSVCDVDGAQAVGFLKAMGFTSLTKKVADKTGA 310 Query: 298 QAKGAKPAAKPQETSVADEAP---------------------------EVTATVISYDNY 330 + + A E + P E++A I Y Sbjct: 311 VLENIEAADVVIEGWESTAKPAEQAEDSAGELEGKAWTAAPLAENVAAEISALPIDNSAY 370 Query: 331 VTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAH--- 387 T+ E LK WIA+ + A DTETD+L+ + + LVG+S + PG A YIP+AH Sbjct: 371 ETVSTVERLKEWIAEAYEVGYVAVDTETDALNAMESGLVGVSLSCTPGKACYIPLAHVDG 430 Query: 388 ------DYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFD 441 QI A+ LLKP+LED LK+ QN+KYD +L YG+E+ D Sbjct: 431 EGDLLGGGALLEGQIPLAEAITLLKPMLEDPAVLKIAQNMKYDWLVLKRYGVEMA-PFDD 489 Query: 442 TMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAED 501 TML SY L++ G + MD L++RWL H I F+E+ G GK+Q++F+++ L++A YAAED Sbjct: 490 TMLLSYALDAGMGGNGMDELSQRWLNHTPIPFKEVCGSGKSQISFDKVPLDKATAYAAED 549 Query: 502 ADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTL 561 ADVTL+L + P L + + V+E +E P+V L+++ER G+ ID ++L S E Sbjct: 550 ADVTLRLWKILKPRLAAEEMTV-VYERLERPMVATLAKMERRGISIDRQMLSLLSGEFAQ 608 Query: 562 RLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALD- 620 A LE + H++AGE FN+ S KQL ILF K G+ KKT GA STS VL++LA Sbjct: 609 GAARLESEIHDVAGEIFNVGSPKQLGEILFGKMGLPGGKKTKTGAWSTSASVLDDLAAQG 668 Query: 621 YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIP 680 + LP I+E+R L+KLKSTYTD LP IN +TGRVHTS+ A T+TGRLSS++PN+QNIP Sbjct: 669 HELPSKIVEWRQLSKLKSTYTDALPSFINQETGRVHTSFSLASTSTGRLSSSEPNIQNIP 728 Query: 681 VRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAE 740 +R EGR+IRQAFIA + ++SADYSQIELR++AH++ L AFA+G DIH TA+E Sbjct: 729 IRTSEGRKIRQAFIAEKGKKLISADYSQIELRVLAHMADIPQLKQAFADGLDIHAMTASE 788 Query: 741 VFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLE 800 +FG+P+E + RR AKAINFG+IYG+SAFGLA QL I R EA Y+ YFER+PG+ + Sbjct: 789 MFGVPIEGMDPMVRRRAKAINFGIIYGISAFGLANQLGIARGEAGDYIKTYFERFPGIKD 848 Query: 801 YMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAM 860 YME T+ GYVET+ GRR + PD+ + N R ERAAINAP+QG+AADII+RAM Sbjct: 849 YMEETKKFVHANGYVETIFGRRAHYPDVNTKNPNMRQFYERAAINAPIQGSAADIIRRAM 908 Query: 861 IAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTR----LDVPLLV 916 + +D L+ +M++QVHDEL+FE+ +D VD K + ME T L VPL V Sbjct: 909 VRMDEVLETANLDAQMLLQVHDELIFELPEDQVDETKKLVIATMEKATEPALQLSVPLKV 968 Query: 917 EVGSGENWDQAH 928 E + +NW++AH Sbjct: 969 EAEAADNWEEAH 980 >UniRef50_B8H5J7 DNA polymerase I n=23 Tax=Alphaproteobacteria RepID=B8H5J7_CAUCN Length = 982 Score = 1042 bits (2694), Expect = 0.0, Method: Composition-based stats. Identities = 423/952 (44%), Positives = 571/952 (59%), Gaps = 36/952 (3%) Query: 5 PQNPLILVDGSSYLYRAYHAFPPLTN-SAGEPTGAMYGVLNMLRSLIMQYK---PTHAAV 60 P L LVDGS+YL+RAYHA PPLT S G P GA+ G NML L+ + PTH AV Sbjct: 39 PAVRLFLVDGSAYLFRAYHALPPLTRKSDGLPVGAVQGFCNMLWKLLRDMQGDTPTHLAV 98 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 ++D KTFR+ L++ YK+HRPP P+DL Q + A G+P + + G EADD+I Sbjct: 99 IWDHSEKTFRNALYDQYKAHRPPPPEDLIPQFPLVREATLAFGVPAIELPGYEADDLIAA 158 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL 180 A +A G +I + DKD+ QLV +++ + M + E+V K+GV PE ++D Sbjct: 159 YACKARDIGGEAIIVSSDKDLMQLVGDGVSMYDPMKGVRIEREQVFEKFGVYPEKVVDVQ 218 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 AL GDS DN+PG PG+G KTA L+ G LDTL A +I L Sbjct: 219 ALCGDSVDNVPGAPGIGIKTAAQLITEYGDLDTLLARAGEIK------QPKRRETLINFA 272 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 + LS L + D L + L V++P E L ++ EF+ V G Sbjct: 273 DQIRLSRALVKLDCDTPLPQPLDALTVREPDKEALAAFLEQMEFRSLARRVGDGSAAATP 332 Query: 301 GA--KPAAKPQET---------SVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKA 349 G +PAA P+ + A V I + Y + D TLKAW+AK Sbjct: 333 GTLDRPAAPPKAPVVSVSYMGAAARAAAHPVEPVKIDHAAYACVRDLATLKAWVAKATDK 392 Query: 350 PVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAH---------DYLDAPDQISRER 400 + AFDTETD+L + +A L G+S AI PG A YIP++H + +QI Sbjct: 393 GLVAFDTETDALSSATAGLCGVSLAIAPGEACYIPISHCEKADGLAFEAPADIEQIPLAD 452 Query: 401 ALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDS 460 + LKPLLED LKV QN KYD +LA +GI++ I DTML SY+L + H MD Sbjct: 453 VIATLKPLLEDPAVLKVAQNAKYDIAVLARHGIQVAPIE-DTMLISYVLEAGLHGHGMDE 511 Query: 461 LAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHK 520 L+E L HK I F+++AG GK Q++F +AL EA YAAEDADVTL+L+ + P L + Sbjct: 512 LSELHLGHKPIPFKQVAGSGKGQISFKHVALPEATAYAAEDADVTLRLYHHLKPQLARA- 570 Query: 521 GPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNL 580 V+E +E P+ VL+ +E NGV++DP+ L S E +LR+A+ E +A E+ G FNL Sbjct: 571 SLSTVYETLERPMPAVLAMMENNGVRVDPEALRLLSNEFSLRMAQFEARAQELVGRPFNL 630 Query: 581 SSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTY 640 S KQ+ +LF + +K KKT G ST +VLE LAL++ LP+V+L++R L+KLK TY Sbjct: 631 GSPKQIGDVLFGEMQMKGGKKTATGQWSTDSDVLESLALEHELPRVLLDWRQLSKLKGTY 690 Query: 641 TDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYV 700 T+ L I P TGRVHTSY A T TGRLSS+DPNLQNIPVR EEGR+IR+AF+A +V Sbjct: 691 TENLIAAIAPSTGRVHTSYALAATTTGRLSSSDPNLQNIPVRTEEGRKIRKAFVAAPGHV 750 Query: 701 IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAI 760 ++SADYSQIELR++AH+ L AF EG DIH TA+E+F P+E + RR AKAI Sbjct: 751 LISADYSQIELRLLAHIGDIPQLKKAFQEGLDIHAMTASEMFDTPIEGMDPMIRRRAKAI 810 Query: 761 NFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDG 820 NFG++YG+SAFGLA QL I + EA Y+ YFER+PG+ YM+ T+A +E GYV T+ G Sbjct: 811 NFGIVYGISAFGLANQLGISQGEAGAYIKTYFERFPGIQAYMDATKAFVREHGYVTTIFG 870 Query: 821 RRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQV 880 R++ +PDI++ + A R AERAAINAP+QG AAD+++RAMI + L+A RM++QV Sbjct: 871 RKINIPDIEAKSAAHRQFAERAAINAPIQGAAADVMRRAMIRMPVALEAAGLSTRMLLQV 930 Query: 881 HDELVFEVHKDDVDAVAKQIHQLMENCTR----LDVPLLVEVGSGENWDQAH 928 HDELVFE + + + + +ME L +PL VE + NWD+AH Sbjct: 931 HDELVFEAPEAEAERACAVVRAVMEKAAEPAVALSIPLTVEARAASNWDEAH 982 >UniRef50_B6IUP1 DNA polymerase I, putative n=2 Tax=Alphaproteobacteria RepID=B6IUP1_RHOCS Length = 987 Score = 1040 bits (2690), Expect = 0.0, Method: Composition-based stats. Identities = 421/960 (43%), Positives = 570/960 (59%), Gaps = 48/960 (5%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 L LVDGS +++RAYHA PPL G P A+ G NML L+ + K AV+FDAK Sbjct: 36 LYLVDGSGFIFRAYHALPPLNRPDGTPVNAVLGFTNMLMKLLAELKAEAVAVIFDAKRLN 95 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR+E + YK++RP P+DLR Q + V A LP L + G EADD+I T AR A + Sbjct: 96 FRNEFYPDYKANRPEPPEDLRPQFAIIREAVDAFCLPCLELEGYEADDLIATYARLAREQ 155 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSD 188 GRPV + + DKD+ QLV + L++ M ++GPEEV K+GVPPE ++D AL GDS D Sbjct: 156 GRPVTVVSSDKDLMQLVRDGVRLMDPMKGRLIGPEEVAEKFGVPPEKVVDVQALAGDSVD 215 Query: 189 NIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQ 248 N+PGVPG+G KTA L+ G L+TL +I R KL +N E+A +S + Sbjct: 216 NVPGVPGIGVKTAAQLITEYGDLETLLERAGEIRQAGRR------QKLLENAELARISKR 269 Query: 249 LATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAG-------------- 294 L + V + + ++L V++P +L+ K F+ VEA Sbjct: 270 LVRLDDAVPVPVPLDRLRVREPDHHKLIDWLKVQGFRSVIHKVEAELAADGTLVDGAAPA 329 Query: 295 ---------KWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAK 345 ++ + P T V + + A Y + D + L WI + Sbjct: 330 PAPAGRAPRTDVRTALDSRSYAPAATPVPEARDDGVAPQPERVEYELVQDLDALDRWIER 389 Query: 346 LEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAH----------------DY 389 +A A DTETD L +SA LVG+S ++EPG A YIPV H Sbjct: 390 AREAGTVAVDTETDGLTPVSAGLVGISLSVEPGRACYIPVQHIDPATPKGATGGLDLGGT 449 Query: 390 LDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYIL 449 P QI+ AL LKPLLED LKVGQN+K+D I A +GI + I DTML SY+L Sbjct: 450 PPPPPQIALADALARLKPLLEDPAVLKVGQNVKFDWQIFARHGIAMAPI-DDTMLISYVL 508 Query: 450 NSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLH 509 + H MD LA R L H TI ++E+ G GK+++TF+++ L++A YAAEDAD+TL+LH Sbjct: 509 GTGLHGHGMDELALRHLGHTTIKYDEVTGTGKSRITFDRVPLDKARDYAAEDADITLRLH 568 Query: 510 LKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKK 569 + DL + + ++E +E PLVPV++R+E GV +D VL S + R+ E+E + Sbjct: 569 RVLKHDLVRQH-MVTLYETVERPLVPVVARMESRGVLVDRAVLRQMSSDFAQRMLEMEAE 627 Query: 570 AHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALD-YPLPKVIL 628 ++A FN+ S KQL ILF++ + K GA T VLE LA + + +L Sbjct: 628 IQKLAPRAFNVGSPKQLGEILFDEMKLPGGSKGKSGAWGTDSGVLEGLAEQGVEIAQKVL 687 Query: 629 EYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRR 688 ++R LAKLKSTYTD L I+ +TGRVHTS+ A TATGRLSSTDPNLQNIP+R EEGR+ Sbjct: 688 DWRQLAKLKSTYTDALAEQIDARTGRVHTSFALAATATGRLSSTDPNLQNIPIRTEEGRK 747 Query: 689 IRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLET 748 IR+AF+A ++++S DYSQIELR++A ++ L AF +G DIH TA++VFG+PL+ Sbjct: 748 IRRAFVARPGHLLLSVDYSQIELRLVAEMAGVPALRRAFHDGIDIHAMTASQVFGVPLDQ 807 Query: 749 VTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQ 808 +TSE RR AKAINFG+IYG+S FGL RQL I EA ++ YFER+P + YME T+A Sbjct: 808 MTSEIRRKAKAINFGIIYGISGFGLGRQLGITPGEAGAFIRQYFERFPELQTYMETTKAF 867 Query: 809 AKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQ 868 A+E GYV TL GRR ++ I+ ARRA AER AINAP+QGTAADIIKRAM ++ L Sbjct: 868 AREHGYVTTLLGRRCWIQGIREKAPARRAYAERQAINAPIQGTAADIIKRAMARIEPALA 927 Query: 869 AEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 A + M++QVHDEL+FEV + V+ A + +ME L VPL+ E G NW +AH Sbjct: 928 AAKLDAAMLLQVHDELLFEVPEAQVEETAAVVRGVMEGAAGLGVPLVAEAGWAPNWAEAH 987 >UniRef50_A9H4T5 DNA polymerase I n=43 Tax=Alphaproteobacteria RepID=A9H4T5_GLUDA Length = 943 Score = 1036 bits (2679), Expect = 0.0, Method: Composition-based stats. Identities = 403/944 (42%), Positives = 552/944 (58%), Gaps = 31/944 (3%) Query: 8 PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 LILVDGS +++RA+HA PP+T G P A++G NML L+ + TH AV+FDA Sbjct: 8 HLILVDGSGFIFRAFHALPPMTAPDGTPVNAVFGFTNMLARLLRDHVGTHLAVIFDAGRV 67 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 TFR+ +++ YK+HRP P++LR Q + A G+P + +G EADD+I AR Sbjct: 68 TFRNGIYDQYKAHRPEPPEELRPQFALVRDATAAFGVPGIEEAGWEADDLIAAYARLVTD 127 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSS 187 AG + + DKD+ QL+ P + +++ + +GP+EV K+GV P+ +ID AL+GDS Sbjct: 128 AGGRCTVVSSDKDLMQLIRPGVEMLDPIRQKPIGPKEVEAKFGVTPDKVIDVQALIGDSV 187 Query: 188 DNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSY 247 DN+PGVPG+G KTA AL+ G LD + G L ++ E A LS Sbjct: 188 DNVPGVPGIGPKTASALIAEYGSLDAILD------GAPAMKPSKRRDSLIEHAERARLSR 241 Query: 248 QLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAK 307 L T++ D L E L + P +L + F+ + K A ++ Sbjct: 242 VLVTLREDAPCPLGLEDLICRDPDEVKLGEWLQSMGFRSLLHRMGM-KESAAAVGVASSA 300 Query: 308 PQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISAN 367 P + AP + Y Y T+ L+ W+A+ A A DTETD LD + A Sbjct: 301 PAPAAAVAAAPTPSPDRAPYGPYETVRTAGALETWVAEARTAGFCAIDTETDGLDPLRAG 360 Query: 368 LVGLSFAIEPGVAAYIPVAHDY------------------LDAPD----QISRERALELL 405 LVG+S A+ PG A YIP+AH DAPD Q+ AL +L Sbjct: 361 LVGISLAVAPGRACYIPLAHTAEPPPPQLLPDLLLEPAPQDDAPDPVGPQLETGLALAIL 420 Query: 406 KPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERW 465 PLL D LK+ QN K+D +L G DTML SY + MD L+ + Sbjct: 421 GPLLADASVLKIFQNAKFDLLVLTRAGAPQPAPVDDTMLISYAQFAGRHGQGMDELSRLY 480 Query: 466 LKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNV 525 L H I ++E+ G G+N++ F ++ + A YAAEDADVTL+L L + P L+ H + Sbjct: 481 LGHTPIPYDEVTGTGRNRVPFARVDVARATAYAAEDADVTLRLWLSLRPTLRIHHALA-L 539 Query: 526 FENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQ 585 +E +E PLV VL+ +ER G+ ID L S + R+A++E + +AG FN+ S KQ Sbjct: 540 YEELERPLVAVLADMERAGIAIDVVELRRMSADFATRMAQMEAEIQALAGRSFNVGSPKQ 599 Query: 586 LQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKL 644 L ILF++ G+ K+ GA T VL++LA + LP IL +R LAKLKSTY D L Sbjct: 600 LGEILFDEMGLPGGKRMKSGAWGTDSSVLQDLADQGHDLPGRILAWRQLAKLKSTYADAL 659 Query: 645 PLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSA 704 +P T RVHTS+ A+T+TGRLSS +PNLQNIP+R EEG RIR+AF+A +V++SA Sbjct: 660 VKQADPDTARVHTSFQMAITSTGRLSSNEPNLQNIPIRTEEGGRIRRAFVAAPGHVLLSA 719 Query: 705 DYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGL 764 DYSQIELR++AH++ L AFA G+DIH TA+EVFG+P+E + RR AKAINFG+ Sbjct: 720 DYSQIELRLLAHVADIPALREAFALGQDIHARTASEVFGIPIEGMDPLTRRRAKAINFGI 779 Query: 765 IYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLY 824 IYG+SAFGL RQL IP EA+ Y+D YF RYPG+ YME + +AK+QGYV T GRR + Sbjct: 780 IYGISAFGLGRQLGIPPGEARAYIDAYFARYPGIRAYMETVKQEAKDQGYVTTPFGRRCW 839 Query: 825 LPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDEL 884 +P I + RRA AER AINAP+QG AADIIKRAM+ + L + R+++QVHDEL Sbjct: 840 VPGIADRSAVRRAYAERQAINAPLQGGAADIIKRAMVRLPHALASAGLDGRLLLQVHDEL 899 Query: 885 VFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 +FEV DA++ + Q+ME+ L VPL+VE G+G NW AH Sbjct: 900 LFEVRAGQQDALSALVKQVMESAASLSVPLVVETGTGANWADAH 943 >UniRef50_B9KYZ1 DNA polymerase I n=4 Tax=Thermomicrobia (class) RepID=B9KYZ1_THERP Length = 917 Score = 1035 bits (2676), Expect = 0.0, Method: Composition-based stats. Identities = 391/936 (41%), Positives = 547/936 (58%), Gaps = 50/936 (5%) Query: 6 QNPLILVDGSSYLYRAYHAFPP-LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 + L+LVDG YRAYHA PP L SAGEPT ++G +ML ++ ++P + V FD Sbjct: 7 RPRLVLVDGHGLAYRAYHALPPTLATSAGEPTHVVFGFASMLLEVLNDFEPDYVIVCFDT 66 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 G++FR +L+E YK+HRP PDDL+ Q+E + ++ A+G+P++ G EADD+IGTLA Sbjct: 67 -GRSFRQQLYEEYKAHRPETPDDLKHQLERIRQLLDALGIPIVTREGYEADDLIGTLAAR 125 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI-----LGPEEVVNKYGVPPELIIDF 179 A G VLI TGD D+ QLV ++ +I + V+ +YG PPE + ++ Sbjct: 126 ATANGLEVLIVTGDTDLLQLVDEDVRVILPGRQRFGDYRVYDRQAVIERYGFPPERLPEY 185 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 AL+GD SDNIPGVPG+GEKTA L+Q L+ + +++ + L Sbjct: 186 KALVGDPSDNIPGVPGIGEKTATRLIQRFSSLEEMLDRIDEV------EPPRLREALRAA 239 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 +E S +LATI D ++ L EQ E +L LF++ EF+ + + Sbjct: 240 RETVLASRRLATIVRDADITLDLEQARFGDFDRERVLQLFRELEFRSLVPRLPQPRQPVR 299 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 K A PA++ + +L + L + LE FA D ET Sbjct: 300 KTAAPASQRR----------------------AVLTDADLSDLVRDLETCQAFALDVETT 337 Query: 360 SLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQ 419 +L + A+LVG++ A P + Y+P+ H D Q+ E+ L+ L P L + + Sbjct: 338 ALHPMYADLVGIALATAPDRSYYVPLGHTTGD--TQLDIEQVLQRLAPFLRHPEKQRYAH 395 Query: 420 NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 + KYD +L G I FDTM+ +Y+L + LA L + E+ G+ Sbjct: 396 HGKYDALVLERAGFPRPHIDFDTMIAAYLL--GENAVGLKELAFTKLGWEMEEITELIGR 453 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 GK QLT ++ + +YA D + T +L + P L+ H L +F IE+PL+ VL Sbjct: 454 GKKQLTMDRAEIARVTQYACADVEATYRLVEVLRPQLEAH-NQLRLFTEIELPLIDVLID 512 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 +E+ G+ ID L S L +L LE++ +E+AG FN++S +QL T+LF++ G+ Sbjct: 513 MEKAGIAIDVPYLEQLSIMLDGQLHALERRIYELAGHPFNINSPQQLSTLLFDELGLPRG 572 Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 K+T G S S+EVLE L +P+ + ILEYR L KLKSTY D LP ++P+TGRVHT + Sbjct: 573 KRTKTGY-SVSQEVLENLRDTHPIVEAILEYRQLLKLKSTYVDALPRQVHPQTGRVHTIF 631 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP--EDY-------VIVSADYSQIE 710 HQ V ATGRLSS+DPNLQNIP R E G +R+AFIA Y +++S DYSQIE Sbjct: 632 HQTVAATGRLSSSDPNLQNIPARGELGLAVRRAFIADNRPGYRIADEPILLLSVDYSQIE 691 Query: 711 LRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSA 770 LR+MAH S+D LL AFAEGKDIH ATA+EVFG+PL+ VT E RR AK +NFG++YGM A Sbjct: 692 LRLMAHFSQDPALLRAFAEGKDIHAATASEVFGVPLDAVTPEMRRIAKVVNFGIMYGMQA 751 Query: 771 FGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKS 830 +GLAR + R++AQ++++ YF+R+PGV Y+E TR +A E GYVETL GRR YLP+I S Sbjct: 752 YGLARDTGMSRQDAQRFIEAYFQRFPGVARYLEETRRRAAELGYVETLFGRRRYLPEITS 811 Query: 831 SNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHK 890 SN ARR AAER A+N P+QGTAADI+K AMIAV L R RM++QVHDELV EV + Sbjct: 812 SNPARRQAAERMAVNMPLQGTAADIMKLAMIAVHRALAERGLRSRMLLQVHDELVLEVPE 871 Query: 891 DDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 ++ + + M L VPL V+ +G NW Sbjct: 872 SELATTTELVTTRMSRVVELSVPLEVDAKAGPNWAD 907 >UniRef50_A6KZN3 DNA polymerase I n=15 Tax=Bacteroides RepID=A6KZN3_BACV8 Length = 971 Score = 1029 bits (2661), Expect = 0.0, Method: Composition-based stats. Identities = 413/985 (41%), Positives = 577/985 (58%), Gaps = 78/985 (7%) Query: 7 NPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 + L L+D + +YRAY+AF P NS G T A+ G +N L ++ + PTH V FD Sbjct: 2 DKLFLLDAYALIYRAYYAFIKSPRINSKGFNTSAVLGFVNTLEEVLKKENPTHIGVAFDP 61 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 G TFR E +E YK+ R P+ +R + + +++A +P+L V G EADDVIGTLA E Sbjct: 62 AGPTFRHEAYEQYKAQREETPEVIRLSVPIIKDIIRAYRIPILEVPGYEADDVIGTLATE 121 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTN---TILGPEEVVNKYGV-PPELIIDFL 180 A K G + T DKD QLV N+ + ++G EEV K+ + P +ID L Sbjct: 122 AGKRGITTYMMTPDKDYGQLVGGNVFMYRPKHTGGFEVMGIEEVKAKFDIQSPAQVIDML 181 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 LMGDSSDNIPG PGVGEKTAQ L+ G ++ L + ++ G + K+E N+ Sbjct: 182 GLMGDSSDNIPGCPGVGEKTAQKLIAQYGSIENLLSHSAELKG-------ALKTKVETNR 234 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADV--------- 291 ++ S LATIK DV + L ++L+ ++P EEL +F++ EF+ V Sbjct: 235 KMIEFSKFLATIKIDVPIALNMDELKREEPNEEELRKIFEEMEFRTLIDRVFNRDKKSAF 294 Query: 292 ---------------------EAGKWLQAKGAKPAAKPQETSVADEAPEVTATVIS---- 326 A + G+ + E + E+P ++ Sbjct: 295 AGTYTDATGNDPQGRNRTPGGSARQGNTPNGSGQLSLFGEPASNGESPASPSSPQGNLFA 354 Query: 327 ---------------------YDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNIS 365 +Y + EE + L +F+ DTET D I+ Sbjct: 355 EFTDGGTESEKYSNLACLDNLKYDYQLVDTEEKRTELLQNLLTKEIFSLDTETTGTDPIT 414 Query: 366 ANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDR 425 A LVG+SF+ A Y+PV D +A ++ + +P E E LKVGQN+KYD Sbjct: 415 AELVGMSFSYAENQAFYVPVPADRAEA------QKIVNEFRPAFEKEGVLKVGQNIKYDM 468 Query: 426 GILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAG-KGKNQL 484 +L NYG E+RG FDTM+ Y+L RH+MD LAE +L ++TI EE+ G KGK Q Sbjct: 469 LVLGNYGTEVRGPLFDTMVAHYVLQPEL-RHNMDYLAEIYLHYQTIHIEELIGPKGKGQK 527 Query: 485 TFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNG 544 ++ E +YA EDADVTL+L + +L+ + +F IEMPLVPVL+ +ERNG Sbjct: 528 NMRDLSPEAIYKYACEDADVTLKLKNILEQELKTNDAE-KLFYEIEMPLVPVLAYMERNG 586 Query: 545 VKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGI-KPLKKTP 603 V++D + L SE T R+ ++E++ H++AG +FN++S KQ+ +LF+K I + KKT Sbjct: 587 VRVDTEALKQTSEHFTARMNQIEEEVHQLAGTDFNIASPKQVGEVLFDKLRIVEKAKKTK 646 Query: 604 GGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAV 663 G TSEEVLE L + + ILE+RGL KL TY D LPL+IN +TG++HTS++Q V Sbjct: 647 TGQYVTSEEVLESLRGKHEIVGKILEHRGLKKLLGTYIDALPLLINKETGKIHTSFNQTV 706 Query: 664 TATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGL 723 TATGRLSS++PNLQNIP+RNE+G+ IR+AFI + SADYSQIELRIMAHLS D + Sbjct: 707 TATGRLSSSNPNLQNIPIRNEDGKEIRKAFIPDDGCEFFSADYSQIELRIMAHLSGDTNM 766 Query: 724 LTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKE 783 + AF EG DIH ATAA+V+ + ++ VT EQR AK NFG+IYG+S FGLA ++N+ RKE Sbjct: 767 IEAFKEGDDIHAATAAKVYKISIDKVTREQRSKAKTANFGIIYGISVFGLAERMNVDRKE 826 Query: 784 AQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAA 843 A++ +D YFE YP + EYM+++ A+ QGY+ET+ GR+ YLPDI S N R AER A Sbjct: 827 AKELIDGYFETYPQIKEYMDKSIDLARGQGYIETIFGRKRYLPDINSRNSVVRGYAERNA 886 Query: 844 INAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQL 903 INAP+QG+AADIIK AM+ + Q+E + +MI+QVHDEL F V ++ + V K + + Sbjct: 887 INAPIQGSAADIIKVAMVRIYQRFQSESIKSKMILQVHDELNFSVLPEEKEKVQKIVIEE 946 Query: 904 MENCTRLDVPLLVEVGSGENWDQAH 928 MEN R+ VPL + G G NW +AH Sbjct: 947 MENAYRMQVPLRADCGWGSNWLEAH 971 >UniRef50_D0XR83 DNA polymerase I n=2 Tax=Alphaproteobacteria RepID=D0XR83_9CAUL Length = 994 Score = 1025 bits (2650), Expect = 0.0, Method: Composition-based stats. Identities = 407/960 (42%), Positives = 558/960 (58%), Gaps = 44/960 (4%) Query: 5 PQNPLILVDGSSYLYRAYHAFPPLTN-SAGEPTGAMYGVLNMLRSLIMQYK----PTHAA 59 P L L+D S+Y++RAYHA PPLT S G P GA+ G NML L+ K PTH A Sbjct: 43 PAVRLWLIDASAYIFRAYHALPPLTRKSDGLPVGAVQGYCNMLWKLLKDMKGADGPTHLA 102 Query: 60 VVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIG 119 +FD KTFR+ L++ YK++R P+DL Q + +A G+ + + G EADD+I Sbjct: 103 AIFDHSEKTFRNALYDQYKANRSAPPEDLVPQFPLVRDATRAFGVHCVELPGYEADDLIA 162 Query: 120 TLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDF 179 T A + AG +I + DKD+ QL+ P++ + + M + L + V+ K+GV P+ +ID Sbjct: 163 TYACKVRDAGGECVIVSSDKDLMQLIGPSVVMWDPMKDRRLAEDAVMEKFGVTPDKMIDL 222 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 AL+GDS DN+PG PG+G KTA LL G LDTL +I L Sbjct: 223 QALIGDSVDNVPGAPGIGPKTAAQLLDEYGDLDTLLERAGEIK------QPKRRETLINF 276 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 ++ LS QL + D + V+ P + L + EF+ V GK Sbjct: 277 RDQILLSRQLVRLTCDAPAPEPIDDFRVRDPDPQTLADFLETMEFRSLLRRVGDGKLAGH 336 Query: 300 KGAKPA-AKPQETSVADEAP---------EVTATVISYDNYVTILDEETLKAWIAKLEKA 349 G+ A A+P S +P +V + +D Y I D L A+IA+ +A Sbjct: 337 DGSAFAPARPAPLSAPVISPRYAPQAVSADVEKQSVDHDAYHCIRDLADLDAFIARATEA 396 Query: 350 PVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAP---------------- 393 V FDTETD+L A L G+S AI P A Y+P+ H++ Sbjct: 397 GVVGFDTETDALSATHAGLCGVSLAIGPNDACYVPLTHEHPPVEGAGGLDFGGDTDARPP 456 Query: 394 -DQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSV 452 DQ+ + L LK LLED LKV QN KYD ++A GI + I DTML SY+L Sbjct: 457 LDQLDKPTVLARLKGLLEDPGVLKVVQNGKYDLAVMARRGIRVAPI-DDTMLISYVLEGG 515 Query: 453 AGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKM 512 H MD L+ L H+ I F+ +AG GK Q +F + L+ A YAAEDADVTL+L + Sbjct: 516 LHGHGMDELSRLHLGHEPIPFKSVAGTGKAQKSFKHVELKPATCYAAEDADVTLRLWRIL 575 Query: 513 WPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHE 572 P L + V+E +E + VL+ +E G+++DP L S E LR+AELE +AHE Sbjct: 576 KPRLATER-LATVYETLERGMPAVLADMELRGIRVDPARLRRLSSEFGLRMAELEAQAHE 634 Query: 573 IAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRG 632 IAG FN+ S +Q+ ILF + + KKT G T LE LA + LP+V+L++R Sbjct: 635 IAGRPFNVGSPRQIGEILFGELNLPGGKKTASGQWETGAATLEGLAETHALPRVLLDWRQ 694 Query: 633 LAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQA 692 L+KLK TYTD L ++P+T RVHTSY A TGRL+S+DPNLQNIP+R E GR+IRQA Sbjct: 695 LSKLKGTYTDALVAAMDPQTDRVHTSYQLAAATTGRLASSDPNLQNIPIRTETGRQIRQA 754 Query: 693 FIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSE 752 FIA + +V++SADYSQIELR++AH+ L AF G DIH ATA+E+FG+P+ + E Sbjct: 755 FIAKDGHVLISADYSQIELRLLAHIGDIPELKRAFKAGIDIHTATASEMFGVPVADMDPE 814 Query: 753 QRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQ 812 RR AKAINFG++YG+SAFGLA QL I + EA Y+ YFER+PG+ YM+ TRA+ + Sbjct: 815 TRRRAKAINFGIVYGISAFGLANQLGIDQGEAGAYIKTYFERFPGIRTYMDATRAEVRSL 874 Query: 813 GYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQP 872 G+V T+ GR++++P I S +GA R ERAAINAP+QG AADII+RAMI + L+A Sbjct: 875 GFVSTVFGRKIHIPAIASKSGAERQFGERAAINAPIQGAAADIIRRAMIRMPGALEAAGL 934 Query: 873 RVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTR----LDVPLLVEVGSGENWDQAH 928 +M++QVHDELVFE + +V+A I ++ME L VPL+V+ + +NWD+AH Sbjct: 935 ETKMLLQVHDELVFEAPEAEVEAAIPLIKRIMEGAAEPAVALSVPLVVDARAAKNWDEAH 994 >UniRef50_A0LIP7 DNA polymerase I n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LIP7_SYNFM Length = 902 Score = 1021 bits (2640), Expect = 0.0, Method: Composition-based stats. Identities = 383/929 (41%), Positives = 560/929 (60%), Gaps = 29/929 (3%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 M + + LVDGSSY+YRAY+A LTNS G PTGA+ G ML ++ + KP + V Sbjct: 1 MTEQAR-TFYLVDGSSYIYRAYYAVSRLTNSRGFPTGAVLGFAQMLDKVVREKKPDYICV 59 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 VFDA G TFR E++ YK+ R P+D+ AQI + +V+ G+P + + G EADD+I T Sbjct: 60 VFDAPGPTFRHEMYAPYKATRQKAPEDMIAQIPYIKDLVRFRGIPQMELPGYEADDLIAT 119 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNI-TLINTMTNTILGPEEVVNKYGVPPELIIDF 179 L A + V++ + DKD+ QL+ + + + + EV ++YGVPP ++D+ Sbjct: 120 LTHWAVEQDIEVVVVSSDKDLHQLIDDPVVRQWDPQKDRVFMEWEVEDRYGVPPGRMVDY 179 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 LAL+GDSSDN+PGV G+G+KTA+ LLQ G LD +YA ++ G+ ++ KLE++ Sbjct: 180 LALVGDSSDNVPGVKGIGDKTARQLLQEWGSLDRIYANLARV------GSASVRDKLEKH 233 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 +E A LS +L + + DV +E E P +L+GLF++ EF+ + Sbjct: 234 REEALLSRRLVSFREDVPVERKLEAFAPGPPLKSQLIGLFEELEFRSLLDSLR------- 286 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 + A + + L+ +L PV + ET Sbjct: 287 ------------KELNAVEPAAAAPAGRTKHKIAGSMDELRTLAERLAGEPVVSIQVETT 334 Query: 360 SLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQ 419 D ++++L GLSF E A Y+P+ D + ++ AL L+P+L + K+G Sbjct: 335 RKDAMASDLAGLSFGFEDDGAWYVPLGPDGSEGDGRLPAAVALAALEPVLGRSRPAKIGH 394 Query: 420 NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 +LK + +GIELRGIAFDTM+ +Y+L+ + +D +A L ++E++ GK Sbjct: 395 DLKTAWIVFKKHGIELRGIAFDTMVAAYLLDPGKQNYGIDRVAAECLGENIDSYEDVTGK 454 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 GK+Q+ F+ I + A Y+ AD ++H + L + + +FE IE+PL+ VL+R Sbjct: 455 GKSQVGFDTIDIGRAAAYSCAAADAARRMHPVLKRKLDESR-LTELFEKIELPLITVLAR 513 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 +E G+ D + L + S + L +++A E+FN+ S KQL ILFEK G++ + Sbjct: 514 MEFRGITADAEKLESLSIDFQKALDRTADTIYDLAKEKFNIQSPKQLAYILFEKLGLRVV 573 Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 KKT G PST VLEELAL++P+ +L +R LAKLK TY D L +INP+TGR+HTSY Sbjct: 574 KKTKSG-PSTDMAVLEELALEHPIADHVLVFRTLAKLKGTYADALGKLINPRTGRIHTSY 632 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSR 719 +Q V ATGRLSS+DPNLQNIP+R EEGR+IR AFI ++++SADYSQIELRI+AH S+ Sbjct: 633 NQTVAATGRLSSSDPNLQNIPIRTEEGRKIRSAFIPAPGWLLLSADYSQIELRILAHCSK 692 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 D+ LL AF + +DIHR TAAE+FG+ VT E RR AK INFG+IYGM FGLA++L I Sbjct: 693 DEHLLEAFRDDEDIHRRTAAEMFGVSPIEVTPEMRRQAKTINFGIIYGMGPFGLAQRLRI 752 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 K A+ +D YF+ Y GV +++ T A+ GY ETL GRR ++P+++S N R Sbjct: 753 STKTARTAIDKYFQGYRGVRRFIDTTIELARRLGYSETLLGRRRFIPELQSRNKTIRQLG 812 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 ER AIN P+QGTAAD+IK+AMI + L R M++QVHDELVFE ++++ A + Sbjct: 813 ERLAINTPLQGTAADLIKKAMIDAEDALNGSGLRTVMLLQVHDELVFETPREELAAAQEL 872 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWDQAH 928 + ++ME+ +LDVPL VE+G G+NW +AH Sbjct: 873 VRRVMEDVWKLDVPLKVELGWGDNWAEAH 901 >UniRef50_Q1QDQ1 DNA polymerase I n=24 Tax=cellular organisms RepID=Q1QDQ1_PSYCK Length = 988 Score = 1016 bits (2626), Expect = 0.0, Method: Composition-based stats. Identities = 453/962 (47%), Positives = 589/962 (61%), Gaps = 50/962 (5%) Query: 6 QNPLILVDGSSYLYRAYHAFPP-LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 Q P ILVDGS YL+R YHA P + NS G T A+ G LN L L+ +Y PTH AV FD Sbjct: 38 QPPFILVDGSYYLFRTYHALPKTMQNSQGLVTNAIRGTLNALLKLMRRYHPTHMAVCFDT 97 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 K TFR + E YK++RP M +L QI +H +V A+G+PLL + G EADD+IGTLA Sbjct: 98 KSPTFRHAMSEEYKANRPKMDIELAEQIPYIHRLVTALGIPLLRIEGAEADDIIGTLAYR 157 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMG 184 A G V+ISTGDKDM QL+ + L ++ T + VV K+G+ PE +IDFL LMG Sbjct: 158 AVAEGHHVVISTGDKDMMQLINDCVILEDSFTGKMTDSAGVVEKFGINPEQMIDFLTLMG 217 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 DSSD I GVPG+G+KTA+ LL G +D + I G L + + Sbjct: 218 DSSDGIKGVPGIGKKTAKDLLNEYGNIDNMLKNVANIKG-------RAGKNLLEYADDIP 270 Query: 245 LSYQLATIKTDVELELTCEQLEVQQP---AAEELLGLFKKYEFKRWTADVE--------- 292 ++ QLATI TD+E+ + L++ EL L+ + EF+ A ++ Sbjct: 271 MNAQLATIVTDLEVGQDWQDLKINTDPCAHINELRELYSELEFRNELASLDHPNHPANGN 330 Query: 293 ----AGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEK 348 A+ A+ ++ + ++T + I + TILDE + L Sbjct: 331 GHGTQSVAHSQADAESQAQIAKSLQSSTIGDITDSKIHDRAWHTILDESAFDNLVQLLAS 390 Query: 349 APVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAP---DQISRERALELL 405 AP F DTET S+ A LVGLSFA++ A YIP+ H Q+ R+ L L Sbjct: 391 APHFVIDTETTSVYWRQAELVGLSFAVQAHEAYYIPLTHALEGDELIAKQLDRDTVLARL 450 Query: 406 KPLLEDEKALKVGQNLKYDRGILANYGIEL--------RGIAFDTMLESYILNSVAGRHD 457 KP+LE+ K+GQ+LKYD IL+ Y I L A DTML SY++N+ RH Sbjct: 451 KPILENPNIGKIGQHLKYDAHILSLYDINLLGNIHDKPNNWAMDTMLASYVINAAITRHG 510 Query: 458 MDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQ 517 MD LA +L+ +TI+FE++AGKG Q++F+Q+A++ A YA EDAD+T QL L Sbjct: 511 MDDLARHYLQTQTISFEDVAGKGAKQVSFDQVAIDIASDYACEDADITYQLFDLFSKKLA 570 Query: 518 KHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEE 577 + +E+P +L ++E NG+ I L+ S+ + LEK+A+E+AGEE Sbjct: 571 DDTNNAKLLHELEIPTAEILCQMEANGILIRRPFLNELSKRFDEEIIALEKRAYEVAGEE 630 Query: 578 FNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLK 637 FNL S KQL +LF+K G+ KKT G ST E VL ++ D+PL + LEYRGL+KLK Sbjct: 631 FNLGSPKQLGEMLFDKLGVVGGKKTKTGQYSTGEAVLSKI--DHPLVDITLEYRGLSKLK 688 Query: 638 STYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE 697 STYTD L + + KT RVHTSYHQA+T+TGRLSSTDPNLQNIP+R GR IRQAFIAPE Sbjct: 689 STYTDALDNVADAKTDRVHTSYHQALTSTGRLSSTDPNLQNIPIRTATGRLIRQAFIAPE 748 Query: 698 DYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSA 757 VI++ADYSQIELR+MAH S DK L AF EG DIH ATAAEV G + VT+ +RR+A Sbjct: 749 GRVILAADYSQIELRLMAHFSGDKNLTHAFNEGLDIHAATAAEVLGKEVAEVTATERRNA 808 Query: 758 KAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVET 817 KAINFGL+YGMSAFGLA+QL + R EAQ Y+D+YFERYPGV +YM TRA A E GY+ET Sbjct: 809 KAINFGLLYGMSAFGLAKQLQMSRSEAQDYIDMYFERYPGVKDYMINTRASAYEHGYIET 868 Query: 818 LDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMI 877 + GR+LY PDI SN + AERAAINAP+QG+AAD+IK AMIAVD L EQ +M+ Sbjct: 869 ILGRKLYTPDINHSNRMVKQGAERAAINAPLQGSAADLIKLAMIAVDKVLPKEQ--AKML 926 Query: 878 MQVHDELVFEVHKDDVDAVAKQIHQLMENC-----------TRLDVPLLVEVGSGENWDQ 926 +QVHDELVFEV D VD +++ I M++ VPLLVE SG+NWD+ Sbjct: 927 LQVHDELVFEVDADKVDEISQLITNAMQDVLTATAVEKGWNVNFAVPLLVETDSGQNWDE 986 Query: 927 AH 928 AH Sbjct: 987 AH 988 >UniRef50_Q9S1G2 DNA polymerase I n=25 Tax=Rhizobiales RepID=DPO1_RHILE Length = 1016 Score = 1015 bits (2625), Expect = 0.0, Method: Composition-based stats. Identities = 438/1003 (43%), Positives = 592/1003 (59%), Gaps = 89/1003 (8%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNS-AGEPTGAMYGVLNMLRSLIMQYK-------PTHA 58 + L LVDGS +++RA+HA PPLT G P GA+ G NML L+ + PTH Sbjct: 22 DHLFLVDGSGFIFRAFHALPPLTRKTDGLPIGAVSGFCNMLWKLLRDARNTDVGVTPTHL 81 Query: 59 AVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVI 118 AV+FD KTFR +L++ YK++R P++L Q + +A LP + G EADD+I Sbjct: 82 AVIFDYSAKTFRKDLYDAYKANRSAPPEELIPQFGLIREATRAFNLPCIETEGFEADDII 141 Query: 119 GTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIID 178 T AR+AE G V I + DKD+ QLV+PN+ + ++M + +G +V+ K+GVPPE +ID Sbjct: 142 ATYARQAEATGADVTIVSSDKDLMQLVSPNVHMYDSMKDKQIGIPDVIEKWGVPPEKMID 201 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 A+ GDS DN+PG+PG+G KTA LL+ G LDTL +I + + Sbjct: 202 LQAMTGDSVDNVPGIPGIGPKTAAQLLEEYGDLDTLLERATEIKQV------KRRETILA 255 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 N ++A LS L ++TDV L+L + L ++ +L+G K EF T V Sbjct: 256 NIDMARLSRDLVRLRTDVPLDLDLDALVLEPQNGPKLIGFLKTMEFTTLTRRVAEACDCD 315 Query: 299 AKGAKPA---------------AKPQETSVADEAPEVTATVI------------------ 325 A +PA + VA PEV+ + Sbjct: 316 ASAIEPAIVRIEWGETARGPDLDAAEPEPVAGGIPEVSGESVPMPPRAKAKSAVEGAFSP 375 Query: 326 ----------------SYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLV 369 + YVTI D TL WIA + AFDTET SLD + A LV Sbjct: 376 ADLAKARAEAFATLPFDHSAYVTIRDLVTLDRWIADARATGLVAFDTETTSLDAMQAELV 435 Query: 370 GLSFAIEPG---------VAAYIPVAHD--------YLDAPDQISRERALELLKPLLEDE 412 G S AI AAY+P+ H A +QI AL LK LLEDE Sbjct: 436 GFSLAIADNTADPTGTKIRAAYVPLVHKNGVGDLLGGGLADNQIPMRDALPRLKALLEDE 495 Query: 413 KALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTIT 472 LKV QNLKYD +L YGIE R DTML SY+L++ G H MD L+E++L H I Sbjct: 496 SVLKVAQNLKYDYLLLKRYGIETRSF-DDTMLISYVLDAGTGAHGMDPLSEKFLGHTPIP 554 Query: 473 FEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMP 532 ++++AG GK +TF+ + ++ A YAAEDADVTL+L L + P L G +V+E +E P Sbjct: 555 YKDVAGSGKANVTFDLVDIDRATHYAAEDADVTLRLWLVLKPRLAAA-GLTSVYERLERP 613 Query: 533 LVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFE 592 L+PVL+R+E G+ +D ++L S EL A LE + + +AGE FN+ S KQL ILF Sbjct: 614 LLPVLARMEARGITVDRQILSRLSGELAQGAARLEDEIYVLAGERFNIGSPKQLGDILFG 673 Query: 593 KQGIKPLKKTPGGAPSTSEEVLEELAL-DYPLPKVILEYRGLAKLKSTYTDKLPLMINPK 651 K G+ KT G STS +VLE+LA + LP+ I+++R + KLKSTYTD LP ++P+ Sbjct: 674 KMGLSGGSKTKTGQWSTSAQVLEDLAAAGFELPRKIVDWRQVTKLKSTYTDALPGYVHPE 733 Query: 652 TGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIEL 711 T RVHTSY A T TGRLSS++PNLQNIPVR EGR+IR AFI+ + ++SADYSQIEL Sbjct: 734 TKRVHTSYSLASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPGHKLISADYSQIEL 793 Query: 712 RIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAF 771 R++AH++ L AF +G DIH TA+E+FG+P+E + E RR AKAINFG+IYG+SAF Sbjct: 794 RVLAHVAEIPQLTKAFEDGVDIHAMTASEMFGVPVEGMPGEVRRRAKAINFGIIYGISAF 853 Query: 772 GLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSS 831 GLA QL+I R EA Y+ YFER+PG+ +YME +A A+++GYVET+ GRR+ P+I+SS Sbjct: 854 GLANQLSIERSEAGDYIKKYFERFPGIRDYMESRKAMARDKGYVETIFGRRINYPEIRSS 913 Query: 832 NGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQP--RVRMIMQVHDELVFEVH 889 N + RA ERAAINAP+QG+AAD+I+RAMI ++ L RVRM++QVHDEL+FEV Sbjct: 914 NPSVRAFNERAAINAPIQGSAADVIRRAMIKIEPALVEVGLADRVRMLLQVHDELIFEVE 973 Query: 890 KDDVDAVAKQIHQLMENCT----RLDVPLLVEVGSGENWDQAH 928 DV+ I +MEN T + VPL V+ + NWD+AH Sbjct: 974 DQDVEKAMPVIVSVMENATMPALEMRVPLRVDARAATNWDEAH 1016 >UniRef50_Q2LQV1 DNA polymerase I n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LQV1_SYNAS Length = 901 Score = 1015 bits (2624), Expect = 0.0, Method: Composition-based stats. Identities = 375/925 (40%), Positives = 544/925 (58%), Gaps = 38/925 (4%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 ++ + LVDGS+YLYRA++A L+NS G PT A+YG NML L+ + KP + A+ FD K Sbjct: 12 KSTIYLVDGSNYLYRAFYAIRELSNSRGLPTNAVYGFTNMLIKLLRERKPEYIAITFDLK 71 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 G TFR E + YK+ R P+ L QI + +++ +P+L G EADD+IGTLA Sbjct: 72 GPTFRHETYAQYKATRKATPEALIPQIPYIKDIIRGFSIPILEQQGTEADDIIGTLACRF 131 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185 G V+I +GDKDM QL++P++ +I+TM + V ++GV PE + + L L GD Sbjct: 132 AGEGLKVIIVSGDKDMLQLLSPDVIMIDTMNDRTYDVAAVRERFGVDPEKVPEILGLTGD 191 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 SDNIPG+PG+G K A L++ G ++ + E++ + + E A L Sbjct: 192 MSDNIPGIPGIGPKGALRLVEEYGSIEEILRNVERL------RNPKLRDSVRVYGEQALL 245 Query: 246 SYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPA 305 S LA I+T + L E+ +Q+P E L LF++ EF + + Sbjct: 246 SRDLARIRTGIPLTFDLEEARLQEPDREVLTRLFRELEFSSLLQEFSVVEDCGDNSHT-- 303 Query: 306 AKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNIS 365 + E + A++ L++ + S + + Sbjct: 304 --------------------------LLRTPEAVAAFMEPLKEGGFLVLEMVLSSSEPMR 337 Query: 366 ANLVGLSFAIEPGVAAYIPVAHDYLD-APDQISRERALELLKPLLEDEKALKVGQNLKYD 424 A L+G++ ++ G A YIP+ + + +S E+ +L P L D+K VG +LK Sbjct: 338 AELIGVALGLDSGNAGYIPLEPGAAEKSASSLSEEQVFPVLFPFLADKKIALVGHDLKTV 397 Query: 425 RGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITF-EEIAGKGKNQ 483 +L+ G++++ DTM+ +YILN +++ + + +L + +++ G + Sbjct: 398 LIVLSQKGVKVQNPLLDTMVAAYILNPARRGYELSEIVQDYLHRQVEPLRKKLVGGSSPK 457 Query: 484 LTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERN 543 + E +A + +L + +++ G +F+++EMPLV VL+ +E Sbjct: 458 QSPASFPPERLRDFACRRVEAIGELASTLIEKMEET-GLRELFDSVEMPLVAVLAAMEEK 516 Query: 544 GVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTP 603 GV +D +L S+EL L+ E K + +AGE FN++S KQLQTILFEK + KKT Sbjct: 517 GVLLDLHLLKEMSQELGHLLSLSEAKIYALAGERFNIASPKQLQTILFEKLNLPKGKKTK 576 Query: 604 GGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAV 663 GG ST EVL LAL++ LP IL YR +AKLKSTY D LP +IN +TGR+HTSY+Q V Sbjct: 577 GGY-STDVEVLSNLALNHELPAEILAYRSMAKLKSTYIDALPSLINIRTGRIHTSYNQTV 635 Query: 664 TATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGL 723 ATGRLSS++PNLQNIP+R EG+RIRQAFIAP + IVSADYSQIELR++AHLS D L Sbjct: 636 AATGRLSSSNPNLQNIPIRTLEGKRIRQAFIAPPGWAIVSADYSQIELRVLAHLSEDPVL 695 Query: 724 LTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKE 783 + AFA G+DIH TAA+VFG+ E + +E RR AK INFG++YGMSAFGL+R+L IP+K+ Sbjct: 696 INAFAAGEDIHSRTAADVFGVFPEMINAEMRRQAKVINFGVLYGMSAFGLSRELGIPQKQ 755 Query: 784 AQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAA 843 AQ Y+D YF++Y V Y++ QA+E+GYV TL RR YLP+I S N A R AER A Sbjct: 756 AQAYIDGYFKKYESVKTYLDGILQQARERGYVTTLLNRRRYLPEINSVNPAVRQLAERMA 815 Query: 844 INAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQL 903 INAP+QGTAAD+IK AM+ + ++ + + M MQVHDELVFEV +++ A+ + Q Sbjct: 816 INAPIQGTAADLIKMAMLRIADLIREKGMKSAMTMQVHDELVFEVPQEEKIALMNLVRQE 875 Query: 904 MENCTRLDVPLLVEVGSGENWDQAH 928 ME L VPL V++ SG NWD+AH Sbjct: 876 MEGVVELKVPLKVDIASGRNWDEAH 900 >UniRef50_A5EWG4 DNA polymerase I n=10 Tax=Gammaproteobacteria RepID=A5EWG4_DICNV Length = 901 Score = 1012 bits (2617), Expect = 0.0, Method: Composition-based stats. Identities = 458/926 (49%), Positives = 587/926 (63%), Gaps = 39/926 (4%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 ++LVDGSSYL+RA++A PPLT G PTGAM+GV+ ML L Y+P + AVVFDA GKT Sbjct: 8 VVLVDGSSYLFRAFYALPPLTTQKGHPTGAMHGVIKMLMRLYDDYQPNYFAVVFDAAGKT 67 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR +++ YK++RPPMP+DL QI+PLH ++ A+G PL+ SGVEADDVIGTLAR+A Sbjct: 68 FRHQIYPDYKANRPPMPEDLAVQIQPLHQLITALGFPLIMESGVEADDVIGTLARQALAE 127 Query: 129 GRPVLISTGDKDMAQLVTP-NITLINTMTNTILGPEEVVNKYGV---PPELIIDFLALMG 184 V+IS+GDKDM QL+T +ITL++TM N + +V ++ + +IDFLAL+G Sbjct: 128 DYQVIISSGDKDMTQLLTHADITLLDTMKNETITASDVAKRFKIEQLTAAQVIDFLALVG 187 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 D SDNIPGV VG KTA+ L G LD + +KI G + L Sbjct: 188 DKSDNIPGVEKVGAKTAEKWLATYGSLDAIIENADKIRG-------KVGDNLRAGLAQLK 240 Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304 S QLATI ++L L +L L +YE ++L+ Sbjct: 241 CSQQLATINQTLDLPYRIADLARGAENPHKLAALCAQYELNDI-----QNRYLKTTAVAA 295 Query: 305 AAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNI 364 P++ +Y I A KL + F FD ETDSL+ + Sbjct: 296 PKAPEKL-----------------HYHLIQTIAECNALCEKLAQKSAFVFDVETDSLNYM 338 Query: 365 SANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYD 424 A+ VG+SFA+E G A Y+P+ H + L LK L E+ K+GQ+LK+D Sbjct: 339 QAHWVGISFAVEAGEAWYLPLVH---QNGINLPFAETLAALKNLFENASIRKIGQHLKFD 395 Query: 425 RGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQL 484 R ILA YGI L G+ DTML SY NS A RH+MD LA+ +L +TI FE+IAG G Q Sbjct: 396 RHILARYGISLNGVIDDTMLMSYCYNSTATRHNMDDLADFYLNKQTIRFEDIAGSGAKQR 455 Query: 485 TFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNG 544 F++I LE A +YA EDAD+TLQL+ L ++EN+E PL +L +E G Sbjct: 456 RFDEIDLETAMQYACEDADITLQLYQFFQQKLASEPTLQALYENVERPLAEILWAMEHQG 515 Query: 545 VKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPG 604 VKI L S+EL +L L+K+A+++AG FNL S KQLQ ILFE+ + + KTP Sbjct: 516 VKIAGDKLAVQSQELAAQLKTLQKQAYQLAGGVFNLDSPKQLQEILFERLALPVIHKTPT 575 Query: 605 GAPSTSEEVLEELA--LDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST+EEVL++LA LP++IL YR L KLKSTYTDKLP +I+P + RVHTSYHQA Sbjct: 576 GQASTNEEVLQKLAELRQSALPEIILNYRALGKLKSTYTDKLPELIDPDSKRVHTSYHQA 635 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKG 722 VT+TGRLSS+DPNLQNIP+R++EGRRIRQAFIA E Y I++ADYSQIELRIMAHLS+D+ Sbjct: 636 VTSTGRLSSSDPNLQNIPIRSDEGRRIRQAFIAEEGYSILAADYSQIELRIMAHLSQDER 695 Query: 723 LLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRK 782 L AF +DIH ATAAE+F + E V QRR AKAINFGLIYGMSAFGLARQLNI R Sbjct: 696 LQRAFQLQQDIHTATAAELFSVAPEAVDRNQRRDAKAINFGLIYGMSAFGLARQLNISRT 755 Query: 783 EAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERA 842 +A +Y+D YF RYP VL YM+ R A++QGYV TL GRRLY+PDI + N RR AAER Sbjct: 756 QAAEYIDKYFHRYPQVLAYMDSARQTAQQQGYVSTLLGRRLYIPDIHNKNMQRRRAAERL 815 Query: 843 AINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQ 902 AINAPMQG+AADIIK AM+ A++ R++MQVHDELVFEV +D +I Sbjct: 816 AINAPMQGSAADIIKLAMVQFWQTYGAQK-ECRLLMQVHDELVFEVATAALDIWQPRITH 874 Query: 903 LMENCTRLDVPLLVEVGSGENWDQAH 928 +ME+ L VPL+V+ G ++WD AH Sbjct: 875 IMEHALPLSVPLIVDCGVSKDWDGAH 900 >UniRef50_A5WH47 DNA polymerase I n=4 Tax=Bacteria RepID=A5WH47_PSYWF Length = 1022 Score = 1012 bits (2616), Expect = 0.0, Method: Composition-based stats. Identities = 436/983 (44%), Positives = 579/983 (58%), Gaps = 71/983 (7%) Query: 6 QNPLILVDGSSYLYRAYHAFPP-LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 Q P +LVDGS YL+R YHA P + + G T A+ G LN L ++ +Y PTH AV FD Sbjct: 51 QPPFVLVDGSYYLFRTYHALPKTMMTTQGLTTNAIRGTLNALLKVMRRYHPTHMAVCFDT 110 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 K TFR + E YK++RP M +L QI +H +V+A+G+PLL + G EADD+IGTL Sbjct: 111 KSPTFRHTMSEEYKANRPKMDPELAEQIPYIHRLVRALGIPLLRIEGAEADDIIGTLTHR 170 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMG 184 A + G V+ISTGDKDM QLV + L ++ ++ V K+G+ P IID L LMG Sbjct: 171 AIEEGHHVVISTGDKDMMQLVNDCVILEDSFAGKVVDVPAVEEKFGIKPNQIIDLLTLMG 230 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 D+SD I G+P VG+KTA L +D + A I G + KL + + Sbjct: 231 DASDGIKGIPSVGQKTAVKWLNQYQTVDNILANAHNIKG-------KVGEKLVEFVDNIP 283 Query: 245 LSYQLATIKTDVELELTCEQLE---VQQPAAEELLGLFKKYEFKRWTADVE--------- 292 QLATI T++++ E L EL L+ + EFK A ++ Sbjct: 284 RDRQLATIVTNLDIGQDWEDLRINTDSSTFVAELRDLYSELEFKNELASLDHPNHPANSS 343 Query: 293 -----AGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLE 347 K A+ A Q + + + + TILDE + KL+ Sbjct: 344 VHSVADSKADAESQAQVAKTLQHQKQSSIIEHIKNSNTHDKAWHTILDESAFDNLLNKLQ 403 Query: 348 KAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAP-------------- 393 AP FA DTET S++ A +VGLSF+++ A Y+P+AH + P Sbjct: 404 AAPYFAVDTETTSINWREAQIVGLSFSVQAHEAYYLPLAHVDYNEPQKKAKNKKEEAEQA 463 Query: 394 -------------DQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIEL----R 436 Q+ R+ L LKP+LE+ K+GQ+LKYD +L+ YGIEL + Sbjct: 464 KLLANATVDPLIAKQLDRDTVLAKLKPILENPNIGKIGQHLKYDAHVLSKYGIELNMSPK 523 Query: 437 GIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGR 496 DTML SY+LN+ A RH MD LA +L +TI+FE++AGKG Q+TF+++A+ A Sbjct: 524 NWEMDTMLASYVLNAAATRHSMDDLARHYLHTQTISFEDVAGKGAKQVTFDKVAINIASD 583 Query: 497 YAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHS 556 YA EDAD+T QL L+ + +E+P+ +L ++E G+ I L+ S Sbjct: 584 YACEDADITYQLFELFQDKLKDDAVNQRLLHELEIPVAQILCQMESEGIMIKRSFLNELS 643 Query: 557 EELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEE 616 E + LEK+A+ AGE FNL S KQL +LF+K G+ KKT G ST E VL + Sbjct: 644 ERFDEEIVALEKQAYIEAGEAFNLGSPKQLGEMLFDKLGVIGGKKTKSGQYSTGEAVLSK 703 Query: 617 LALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNL 676 + ++PL ++ LEYR LAKLK+TYTD L + + T RVHTSYHQA+T+TGRLSSTDPNL Sbjct: 704 I--EHPLAEIALEYRSLAKLKNTYTDALDAVADNDTDRVHTSYHQALTSTGRLSSTDPNL 761 Query: 677 QNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRA 736 QNIP+R + GR IRQAFIAP+ V+++ADYSQIELR+MAH S D L AF EG DIH A Sbjct: 762 QNIPIRTKTGRLIRQAFIAPKGRVLLAADYSQIELRLMAHFSGDDNLTRAFNEGLDIHSA 821 Query: 737 TAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYP 796 TAAEV G ++ VT +RR+AKAINFGL+YGMSAFGLA+Q+ + R EAQ Y++ YF RYP Sbjct: 822 TAAEVLGKSVDDVTPTERRNAKAINFGLLYGMSAFGLAKQIQMGRSEAQDYINQYFARYP 881 Query: 797 GVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADII 856 GV YM+ TR A + GY+ET+ GR+LY PDI+ SN R AERAAINAP+QG+AAD+I Sbjct: 882 GVQRYMQETRNSAVDNGYIETILGRKLYTPDIQHSNQMVRRGAERAAINAPLQGSAADLI 941 Query: 857 KRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENC--------- 907 K AMIAVD L + +M++QVHDELVFEV D VD +AK I M+N Sbjct: 942 KLAMIAVDNVLPKQ--NAKMLLQVHDELVFEVDADKVDHIAKLIKNAMQNVLSDTAKQMG 999 Query: 908 --TRLDVPLLVEVGSGENWDQAH 928 VPLLVE G G+NWD+AH Sbjct: 1000 WDVDFAVPLLVETGVGDNWDEAH 1022 >UniRef50_Q1NVM3 DNA polymerase A n=2 Tax=Deltaproteobacteria RepID=Q1NVM3_9DELT Length = 910 Score = 1006 bits (2602), Expect = 0.0, Method: Composition-based stats. Identities = 384/938 (40%), Positives = 535/938 (57%), Gaps = 53/938 (5%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 P+ L+DGS+Y++RAYHA PLTN G PT A+YG L +I + + H AVVFDA+G Sbjct: 5 PPVYLIDGSAYIHRAYHAITPLTNRDGLPTHAIYGFTTTLLRVIREGEARHLAVVFDARG 64 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 FR +L+ YK++RP MP+DL Q+ + +V A + L G EADD+I R Sbjct: 65 PNFRHQLYPQYKANRPAMPEDLACQLPYIKEIVAAYRITSLEREGFEADDLIAAAGRRLA 124 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDS 186 AG V+I +GDKD+ QLV PNIT + M + +L V KY +PP ++D+ AL+GDS Sbjct: 125 AAGHRVVIVSGDKDLLQLVGPNITFWDPMGDRLLDAAAVEAKYQLPPAKLLDYFALIGDS 184 Query: 187 SDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLS 246 SDNIPGVPGVG KTA L++ G LD L A E+++ A + KL +++ A L+ Sbjct: 185 SDNIPGVPGVGPKTAVKLIKEFGDLDQLLANLEQVS------APKLRQKLADHRDAALLA 238 Query: 247 YQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAA 306 +L +K D+E+ T E+ +P +L LF + +F R Sbjct: 239 RELIRLKDDLEIPATPEEYRQPEPDRGKLRQLFSQLDFSRLL------------------ 280 Query: 307 KPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISA 366 E A + + + E L +L A DTET SL+ + A Sbjct: 281 ----------QSEAAAEELDDSAFQLLTTTEQLPTVCEELRAAGGLVIDTETTSLNALRA 330 Query: 367 NLVGLSFAIEPG--------------VAAYIPVAHDYLD---APDQISRERALELLKPLL 409 LVG+S P A Y+P+ H D AP Q+ + L PLL Sbjct: 331 ELVGISLCPLPAAATAADNSQPTPPPTAWYLPIGHRLADGSPAPGQLPLAAVQQQLAPLL 390 Query: 410 EDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHK 469 D + LK+G NLKYD +L ++G+EL D+M+ SY+++ H +D L+ L+ + Sbjct: 391 GDPQLLKLGHNLKYDLQVLKSHGLELAAPLADSMIASYLIDPGRRSHKLDDLSSELLERQ 450 Query: 470 TITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENI 529 +F E++ + F + A RY+ +D + L P LQ+ G ++ + Sbjct: 451 LTSFAEVSAGDRRPEAFAYVEPAAACRYSCQDVVASRLLWELFAPQLQQL-GLDSLLHEV 509 Query: 530 EMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTI 589 EM L+P+L+R+ER G+ +DP VL E LA LE K E+AGE FN++S +QL + Sbjct: 510 EMALLPILARMERLGILVDPAVLDELEREFGRELARLESKIAELAGESFNINSPRQLGEV 569 Query: 590 LFEKQGIKPLKKTPGGA-PSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMI 648 L+E+ + +KT G ST LE LA + LP ++ +R L+KLKSTY DKL +I Sbjct: 570 LYERLKLPHGRKTKGKTGYSTDYRELERLAAYHDLPAAVISHRNLSKLKSTYVDKLATLI 629 Query: 649 NPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQ 708 +P GRVHT+++Q VTATGRLSS++PNLQNIP+R EGRR+R AF+A ++ ++ADYSQ Sbjct: 630 DPADGRVHTTFNQTVTATGRLSSSNPNLQNIPIRTPEGRRLRAAFVAAAGHLFLAADYSQ 689 Query: 709 IELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGM 768 I+LR++AH S D L AFA +DIH TAAE+F + V+++ RR AK INFG++YGM Sbjct: 690 IDLRVLAHYSGDPVLQEAFAHDQDIHARTAAEIFRVNQGLVSADMRRVAKTINFGIVYGM 749 Query: 769 SAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDI 828 SAFGLA QL RKEAQ ++D YFE Y GVL +M+ QA+ G+V TL RR LP+I Sbjct: 750 SAFGLAEQLRCSRKEAQTFIDRYFELYQGVLRFMQEIVEQARRDGWVGTLLNRRRPLPEI 809 Query: 829 KSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEV 888 S N RR AER AIN P+QGTAADIIK A IA D L+ R ++Q+HDEL+FEV Sbjct: 810 NSGNKMRREFAERTAINTPIQGTAADIIKLAAIACDRALREAGCRSEALLQIHDELIFEV 869 Query: 889 HKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 +D++ V I Q ME L VPL V + SG N + Sbjct: 870 PQDELAQVGPLIRQAMEEVMELAVPLTVNLKSGPNLSE 907 >UniRef50_B2RLP5 DNA polymerase I n=2 Tax=Porphyromonas gingivalis RepID=B2RLP5_PORG3 Length = 926 Score = 1003 bits (2594), Expect = 0.0, Method: Composition-based stats. Identities = 389/939 (41%), Positives = 556/939 (59%), Gaps = 34/939 (3%) Query: 8 PLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 L L+D + ++RAY+AF P +S G TGA++G L ++ + P H AVVFD Sbjct: 4 RLFLLDAYALIFRAYYAFIRSPRIDSTGRDTGAVFGFALTLLDILEKESPEHIAVVFDPP 63 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 G +FR + YK+ R P+ +R + + M+ A +P + V EADD IGTLA++A Sbjct: 64 GGSFRHREYAEYKAQREETPEGIRIAVPLIKEMLAAFRIPAVEVPDFEADDTIGTLAKQA 123 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTN---TILGPEEVVNKYGVP-PELIIDFLA 181 E+ G V + T DKD QLV+ I + + GP EV K+G+ P +ID+L Sbjct: 124 EEQGLAVRMVTPDKDFGQLVSERIKIYRPKSGGGYETWGPAEVCEKFGLSIPGQMIDYLG 183 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 L+GDSSDNIPG G+G KTA+ LL G +D +YA +++ G +A K+++ +E Sbjct: 184 LVGDSSDNIPGCKGIGAKTAEKLLAEYGSIDGIYAHQDELKG-------AVAKKIQEGEE 236 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEA----GKWL 297 S LATI+TD + E P + F EF+ +E+ Sbjct: 237 QTRFSRYLATIRTDAPIVFDSEAYRRTSPDMAAVRECFAALEFRTLLKRLESTPADAPAT 296 Query: 298 QAKGAKPAAKPQETSVADEAPEVTATVISY-----DNYVTILDEETLKAWIAKLEKAPVF 352 A+ T + E + T + Y + EE + I P F Sbjct: 297 DLFAGMVQAQEPPTDLFGEGTDATGLPLKKLTDVPHEYTILETEEEIADCIRMFSSTPCF 356 Query: 353 AFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDE 412 +FDTETDS D + AN+V ++ E G A +IP+ D+ +R L+LL+PL D Sbjct: 357 SFDTETDSKDALRANIVAITLCAESGRAFFIPL------PEDEEIGKRRLDLLRPLFADT 410 Query: 413 KALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTIT 472 KVGQN+KYD +L+ YGIE+RG FDTM+ Y+L RH+MD +AE L ++TI Sbjct: 411 AIGKVGQNMKYDIQVLSRYGIEVRGQLFDTMIAHYLLFPDL-RHNMDEMAETLLGYRTIH 469 Query: 473 FEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMP 532 + ++ G K ++ Q+ L+ YA EDAD+T QL+ ++ L + G ++FE+IEMP Sbjct: 470 YSDLVGSDKQEVHIRQVPLQNLADYAMEDADITWQLYERLNAMLSEA-GMTSLFESIEMP 528 Query: 533 LVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFE 592 LVPVL +ER+GVK+D +VL + L + +E + + +AG FN++S Q+ T+LFE Sbjct: 529 LVPVLVDMERSGVKLDTEVLRRTASRLGEEMQRIEDEIYRLAGHSFNINSPSQVGTVLFE 588 Query: 593 KQG-IKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPK 651 + + KKT G+ ST+EE+L +L +P+ ++IL+YRG+ KL STY + LP M P Sbjct: 589 ELQITEKPKKTKSGSYSTNEEILVKLQEKHPIVRLILDYRGIKKLLSTYVEALPEMRYP- 647 Query: 652 TGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPED-YVIVSADYSQIE 710 G++HTS++Q V TGRLSS++PNLQNIP+R E GR +R AF+ D + +SADYSQIE Sbjct: 648 DGKLHTSFNQTVATTGRLSSSNPNLQNIPIRTEVGRGLRAAFVPDNDECIFMSADYSQIE 707 Query: 711 LRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSA 770 LR+MAHLS D+ L+ AF G+DIHRATA++++ LPL VT + RR AK NFG+IYG+SA Sbjct: 708 LRLMAHLSEDESLIQAFLHGEDIHRATASKIYRLPLVEVTDDMRRRAKTANFGIIYGISA 767 Query: 771 FGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKS 830 FGL+ +LNI R EA+ ++ YF YPGV YM+R+ A+AK QGYV TL GR+ +L DI S Sbjct: 768 FGLSERLNISRTEAKALIEGYFASYPGVKAYMDRSIAEAKRQGYVTTLFGRKRFLRDINS 827 Query: 831 SNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHK 890 +N R AER AINAP+QG+AAD+IK AMI + + + R RMI+QVHDEL F V + Sbjct: 828 ANAVVRGYAERNAINAPIQGSAADLIKLAMIRIHEEITERKLRSRMILQVHDELNFNVLR 887 Query: 891 DDVDAVAKQIHQLMENCTR-LDVPLLVEVGSGENWDQAH 928 + V + + ME L VPL+ E+G G NW +AH Sbjct: 888 PEAAEVRELVRSCMEGVMPSLRVPLIAEIGEGANWLEAH 926 >UniRef50_Q1PUU8 Stongly similair to DNA polymerase I n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PUU8_9BACT Length = 887 Score = 1001 bits (2588), Expect = 0.0, Method: Composition-based stats. Identities = 358/926 (38%), Positives = 545/926 (58%), Gaps = 41/926 (4%) Query: 4 IPQNPLILVDGSSYLYRAYHAF-PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 +P+ ++DG S+ Y+A++A LT G P A+YG ML L+ + +P + A+VF Sbjct: 1 MPE-RFFIIDGHSHCYQAFYAITAKLTTPDGTPANAVYGFTRMLLKLLREQRPDYLALVF 59 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 D K T R + + YK+ R P+DL+ QI ++ +V+A G+P+ A G EADDVIG+L Sbjct: 60 DTKYTTNRHQKYSDYKATRKETPEDLQVQIPLIYKVVRAFGIPVYAAKGYEADDVIGSLV 119 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLAL 182 EK V+I T DKD+ QL+ P + +++ I+ + + + G+ P ++D LAL Sbjct: 120 TVLEKKEIEVVIVTSDKDLEQLIGPKVKILHAKKGEIIDSDVLFTQKGIMPNQVVDVLAL 179 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 GD SDNIPGVPG+G KTA L++ G L+++ A I+G K L + Sbjct: 180 AGDVSDNIPGVPGIGNKTALDLIKKWGSLESVLANVGHISG------KKRQENLRTFADQ 233 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A S +L + D+ L + E + +L LF+ + F +D+ Sbjct: 234 ARFSRELLDLYNDIPLTVDMESCRLSTGENIKLRKLFRSFGFNTLLSDM----------- 282 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 V +Y I E ++ ++ K FA D ET D Sbjct: 283 -----------------VATANTEATHYYLINTIEQFHGFLEQISKKDAFAIDLETTGTD 325 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 + A++VGLSF+ E A Y+P+ + ++ + L ++ +LEDE K+GQN+K Sbjct: 326 PLKAHIVGLSFSWEQKEAYYVPLM--APENTRHLTADIVLPEIRKVLEDESKKKIGQNIK 383 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 YD +L + I L+GI FD+M+ SY+LN H++D +A +L +KTI E+ G GK Sbjct: 384 YDLLVLKKHNIGLKGIYFDSMIASYLLNPAKRNHNLDDIAFEYLSYKTIMIAELIGSGKQ 443 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 Q+T +++ +++ +YA +DAD+T +L M P L+K G +F+ IE+PL+ VL+ +E Sbjct: 444 QITMDKVPVDKVCQYACQDADITFRLAETMAPLLKKE-GLWQLFQEIEIPLIYVLAEMEG 502 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 NG+ I+ L S +L +L LEK+ + +A +EFN+SS KQL ILF+K + L++T Sbjct: 503 NGICINADFLRQMSGDLAAQLQCLEKEIYRVAEQEFNISSHKQLGAILFDKFQLPKLRRT 562 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST VL LA +PLPK+ LEYR LAKLKSTY D LP ++N TG++HT+++Q Sbjct: 563 KTGV-STDANVLASLAWRHPLPKLALEYRQLAKLKSTYADALPNLLNQDTGKIHTTFNQT 621 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIELRIMAHLSRDK 721 VT+TGRLSS++PNLQNIPV+ + G++IR+AFI ++ V +SADYSQIELRI+AH S D Sbjct: 622 VTSTGRLSSSNPNLQNIPVKTDIGKQIRRAFIPSGKNAVFLSADYSQIELRILAHFSEDT 681 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 L+ AF E DIH A A+ ++ +PLE VT+E RR+AKAINFG+IYG++ +GL+R + Sbjct: 682 ALMEAFREDLDIHAAVASSIYHVPLENVTTEMRRNAKAINFGIIYGLNEYGLSRDTGLSL 741 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 +A+ ++D YF Y GV E+ ++ +AKE GYV+TL R+ +PDI + N R AER Sbjct: 742 NDAKDFIDAYFTLYQGVREFRDKVVEEAKEMGYVKTLFNRKRAIPDINAKNKRFRNLAER 801 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 AIN +QG+AAD+IK AM + + L+ RM++Q+HDEL+FEV ++ + Sbjct: 802 IAINTIIQGSAADLIKVAMNNIYSKLKCGDYEARMLLQIHDELLFEVGVQALEQTRIMVQ 861 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQA 927 + M + L VP+ V + +G+NW + Sbjct: 862 EEMGHAVTLRVPVKVNIKTGKNWMET 887 >UniRef50_A4YLA1 DNA polymerase I (POL I) n=63 Tax=cellular organisms RepID=A4YLA1_BRASO Length = 1034 Score = 1000 bits (2587), Expect = 0.0, Method: Composition-based stats. Identities = 421/988 (42%), Positives = 575/988 (58%), Gaps = 74/988 (7%) Query: 7 NPLILVDGSSYLYRAYHAFPPL-TNSAGEPTGAMYGVLNMLRSLIMQY----KPTHAAVV 61 + + LVDGSSY++RAYHA PPL S G A+ G NML L+ +PTH A+V Sbjct: 55 DHVFLVDGSSYIFRAYHALPPLNRKSDGLNVNAVLGFCNMLWKLLRDMPETDRPTHLAIV 114 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 FD TFR++++ YK+HRPP PDDL Q + V+A LP L SG EADD+I T Sbjct: 115 FDKSEVTFRNQIYADYKAHRPPAPDDLIPQFALIREAVRAFDLPCLEQSGFEADDLIATY 174 Query: 122 AREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLA 181 AR A + G I + DKD+ QLV +T+ +TM + +G EV+ K+GVPPE +++ A Sbjct: 175 ARLACERGATTTIVSSDKDLMQLVNDCVTMYDTMKDRRIGTAEVIEKFGVPPEKVVEVQA 234 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 L GDS+DN+PGVPG+G KTA L+ G L++L +I L +N E Sbjct: 235 LAGDSTDNVPGVPGIGIKTAAQLINDYGDLESLLTRAAEIK------QPKRREALIENAE 288 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK- 300 A +S QL + V LE+ + L V +P +L+ K EF T V + Sbjct: 289 KARISRQLVLLDDKVALEVPLDDLAVHEPDPRKLIAFLKAMEFSTLTRRVAEYSQIDPAD 348 Query: 301 ---------GAKPAAKPQETSVAD------------------------------------ 315 G+ PAA P +S A Sbjct: 349 VTADAQLKVGSSPAAAPTPSSPASGGGSAPSKPATAPRTGDPRIDKSAMGKGTPAGLAES 408 Query: 316 EAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAI 375 A + I D Y T+ LKA++A+ + D + S+D + ANL GLS A+ Sbjct: 409 RAEAAKSARIDRDKYQTLRSLPELKAFLARAHEFGRVTVDVKASSIDPMQANLCGLSLAL 468 Query: 376 EPGVAAYIPVAH----------DYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDR 425 PG A YIP+AH D APDQI AL LKP+LE LK+G N+K+ Sbjct: 469 APGEACYIPLAHRQAGDGGGLFDAGLAPDQIKESEALAALKPVLESTGLLKIGYNIKFLA 528 Query: 426 GILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLT 485 +LA +GI L+ + D +L SY L++ G H +DSLAE L H I+ E+ G GKN+LT Sbjct: 529 VLLAQHGITLQNV-DDILLMSYALDAGRGSHKLDSLAEHVLAHAIISEGELIGSGKNKLT 587 Query: 486 FNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGV 545 F Q+A++ A +AAE ADV ++ + P L + V+E +E PLV VL+R+ER G+ Sbjct: 588 FEQVAIDRATAHAAEAADVIHRVWRVLKPRLTAER-MTAVYETLERPLVSVLARMERRGI 646 Query: 546 KIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGG 605 ID +VL S + A +E + E+AGE N+ S KQ+ ILF K G+ +T G Sbjct: 647 SIDRQVLSRLSGDFAQTAARVEAELQELAGEPINVGSPKQIGDILFGKMGLSGGTRTKTG 706 Query: 606 APSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVT 664 A STS +L++LA + ILE+R ++KLKSTYTD LP +NP+T RVHT+Y A T Sbjct: 707 AWSTSASILDDLAEQGNDFARKILEWRQVSKLKSTYTDALPTYVNPQTHRVHTTYALAAT 766 Query: 665 ATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLL 724 TGRLSS +PNLQNIPVR E+GR+IR+AFIA Y +VSADYSQIELR++A ++ L Sbjct: 767 TTGRLSSNEPNLQNIPVRTEDGRKIRRAFIATPGYKLVSADYSQIELRLLAEIADIPVLK 826 Query: 725 TAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEA 784 AF +G DIH TA+E+FG+P++ + SE RR AKAINFG+IYG+SAFGLA QL I R+EA Sbjct: 827 QAFKDGLDIHAMTASEMFGVPIKDMPSEVRRRAKAINFGIIYGISAFGLANQLGIAREEA 886 Query: 785 QKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAI 844 Y+ YFER+PG+ YM+ TR ++ GYV TL GR+ + P+IK+SN + RA ERAAI Sbjct: 887 SAYIKRYFERFPGIRAYMDETREFCRKNGYVVTLFGRKCHYPEIKASNASVRAFNERAAI 946 Query: 845 NAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLM 904 NA +QGTAADII+RAM V+ L ++ +M++QVHDEL+FEV +D+V A + +M Sbjct: 947 NARLQGTAADIIRRAMTRVEEALAQKKLSAQMLLQVHDELIFEVPEDEVAATLPVVQHVM 1006 Query: 905 EN----CTRLDVPLLVEVGSGENWDQAH 928 ++ L VPL V+ + +NWD+AH Sbjct: 1007 QDAPFPAVLLSVPLHVDARAADNWDEAH 1034 >UniRef50_D1R879 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R879_9CHLA Length = 896 Score = 997 bits (2578), Expect = 0.0, Method: Composition-based stats. Identities = 383/922 (41%), Positives = 548/922 (59%), Gaps = 38/922 (4%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 L ++D S +LYR+Y A +TN GE T A+YG + + L + P H VFD Sbjct: 10 LYVLDASGFLYRSYFAIRNMTNKQGESTNALYGFIRSVLKLFKDFNPEHLVCVFDGPNNA 69 Query: 69 F-RDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 R EL+ +YK+HR MP DLR QIE MG+P L+V VEADD +GT+A+ AE+ Sbjct: 70 KKRLELYPNYKAHRSAMPPDLRYQIEWAQDFCSLMGIPYLSVPEVEADDTMGTVAKWAEQ 129 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMT-NTILGPEEVVNKYGVPPELIIDFLALMGDS 186 G + T DKDMAQLV P++ L+NT NTIL + ++GVPP ++D LA+ GD+ Sbjct: 130 QGAITYLCTSDKDMAQLVNPHVFLLNTHKDNTILDAASIEKEWGVPPSQMVDLLAMTGDA 189 Query: 187 SDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLS 246 SDNIPG+ G GEKTA ALL+ G LD + A PE++ G K L+ ++A +S Sbjct: 190 SDNIPGLTGFGEKTAAALLRQFGSLDYILAHPEEVPG------KKKQETLQTEADLARIS 243 Query: 247 YQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAA 306 L TI VE+ + P + L + + F ++ + ++A Sbjct: 244 RDLVTIDLSVEIPQEIAFYKKTDPVIDPLKTFYARMNFNSLLRELGQEEPVEAAVEAEKE 303 Query: 307 KPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISA 366 + YV + + E A + L FDTET + + A Sbjct: 304 TVE--------------------YVLVDEPEAFDALLKNLSSEKQICFDTETTDIQPLKA 343 Query: 367 NLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRG 426 LVG+ F I P A Y+P+ ++ ++R LE +KPL E+ G N+KYD Sbjct: 344 ELVGIGFGIHPKKAWYVPLN-------GKLGKQRVLEGVKPLFENSAIGFYGHNVKYDWH 396 Query: 427 ILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTF 486 +L N GI+++ I FDT+L SYILN+ + +H ++ LA + TI E+ GKGKN L+ Sbjct: 397 VLQNEGIQIQNICFDTILASYILNAHSRQHSLEVLALEYFGKVTIPISELIGKGKNVLSM 456 Query: 487 NQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVK 546 + +E Y ED D T +L + L K + LN++ IE+PL+ VL+++ER G+ Sbjct: 457 RDVPIERVTEYCCEDVDFTCRLKEVLEKQL-KERDLLNLYHQIELPLLVVLAKMERRGIY 515 Query: 547 IDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGA 606 +D L S+ELT L L++ + +AGEEFNL+S KQ+ +LF K GI KKT G Sbjct: 516 VDIPYLEQLSKELTQELKTLQESIYTMAGEEFNLNSPKQVSELLFIKLGIPAPKKTATGH 575 Query: 607 PSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTAT 666 STS EVLE L DYPL ILEYR L KL+STY D LP + P+T R+H++++Q+V AT Sbjct: 576 -STSAEVLEFLKNDYPLAGKILEYRLLEKLRSTYVDALPSQVIPRTHRIHSTFNQSVAAT 634 Query: 667 GRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQIELRIMAHLSRDKGLLT 725 GRLSS DPNLQNIP+R EEGR+IR AF E + +SADYSQIELR++AHLS+D L+ Sbjct: 635 GRLSSQDPNLQNIPIRTEEGRKIRGAFRPEKEGWSFLSADYSQIELRLLAHLSQDPVLMA 694 Query: 726 AFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQ 785 AF +DIH TAA +F +PLE V+ EQR AKAINFG+IYG AFGLAR+L I K+A Sbjct: 695 AFQNNEDIHTYTAASMFEIPLEQVSKEQRYQAKAINFGIIYGQQAFGLARELGIEVKQAS 754 Query: 786 KYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAIN 845 K++ +YF+RYP + EY+++++ A+ G TL GR +P+I S N RAAAER A+N Sbjct: 755 KFITMYFQRYPKIKEYLDQSKENARATGKSVTLTGRERIIPEILSKNMQIRAAAERLAVN 814 Query: 846 APMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLME 905 P+QGTAAD+IK AM+ +D ++ + + MI+Q+HDEL+FE+ +++ ++ + ++M+ Sbjct: 815 TPLQGTAADLIKMAMLKMDEEIEKQHLKGFMILQIHDELIFEIPDEEISLFSQLVPEVMQ 874 Query: 906 NCTRLDVPLLVEVGSGENWDQA 927 + L+V L+V++ G+NW + Sbjct: 875 SVMLLNVSLVVDINIGKNWKEC 896 >UniRef50_C1ZLA6 DNA polymerase I n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZLA6_PLALI Length = 1031 Score = 995 bits (2574), Expect = 0.0, Method: Composition-based stats. Identities = 357/951 (37%), Positives = 531/951 (55%), Gaps = 36/951 (3%) Query: 3 QIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 IP+ L+D +++ +HA PP+T+ AG+PT A++G L LI + KPT Sbjct: 90 TIPRERAWLIDVFGVMFQVFHAIPPMTSPAGQPTNAVFGFCRDLLWLIEKQKPTWLICAM 149 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 D+ G R+ + YK++R MP+DLR QI L + +A GLP++ G EADDV+ +LA Sbjct: 150 DSPGPGIRESWYPEYKANRTEMPEDLRPQIPLLKEVFEAFGLPIIQQDGWEADDVLASLA 209 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLAL 182 + + G V I T DKD QL+TP I + N T ++ ++G+ P+ ++DF L Sbjct: 210 AQFARHGTDVAIVTNDKDARQLLTPQIQIYNLRKMTWFNEASLLEEWGIRPDQVVDFQGL 269 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 +GD+ DN+PGVP VG K A ALLQ L+ + A ++ G + L+ E Sbjct: 270 VGDAVDNVPGVPLVGPKKAAALLQQFETLEGVLAHADQAPGA------KLKENLKNFAEQ 323 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWT---ADVEAGKWLQA 299 A LS +L + T+++L+ E +P E+L LF++ F++ A V A Sbjct: 324 ARLSQKLVRLNTELQLDFDPEAGRHFRPDVEKLQALFRRLGFRKLVDEAARVLGQVPSSA 383 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDN---------------YVTILDEETLKAWIA 344 + S+ D P + + +N + + E L A Sbjct: 384 ASTTQNSATTTPSLNDGNPAENSLFSAPENNTVVPSKPLQRLERTWEMVNTPEGLAALSR 443 Query: 345 KLEKAPVFAFDTETDSLDNISANLVGLSFAI-----EPGVAAYIPVAHDYLDAPDQISRE 399 +L D ET LD + +VG + A +PG A Y+PV + Sbjct: 444 QLPLLTQICIDLETTGLDPLRDEIVGWAIAWAAQHGQPGRAVYLPVLGPPGSVL--LDGT 501 Query: 400 RALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMD 459 ++ LKP+LE+ + + QN+K+D + GI I DTM+ Y+L++ A H+++ Sbjct: 502 AVVQTLKPILENPQCQLINQNVKFDLLAMRKVGIRPATIGLDTMVGDYLLDAGARSHNLE 561 Query: 460 SLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKH 519 L +++L TI ++ G GKNQ T NQI +E YA EDA++ +++ + LQ+ Sbjct: 562 VLGQKYLSAATIPISDLLGSGKNQKTMNQIEIERVAEYATEDAELVVRMAPIIESQLQEA 621 Query: 520 KGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFN 579 G +++ +E PL+PVL+ +E G+K+D L S+EL++ LA L + HE+AG EFN Sbjct: 622 -GLWKLYDEVEKPLIPVLADMEFKGIKVDVPELERQSQELSITLARLMSEIHELAGREFN 680 Query: 580 LSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKST 639 + S QL+ ILFE+ + KKT G PST +EVLE LA +PLP I E+R L KLK T Sbjct: 681 IDSPMQLRKILFEELKLPVQKKTKTG-PSTDQEVLELLAPLHPLPAKITEHRHLTKLKGT 739 Query: 640 YTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PED 698 Y D LPL+++P++GR+HTS++Q V ATGRLSS+DPNLQNIP+R EG RIR+AF++ + Sbjct: 740 YLDALPLLVHPQSGRIHTSFNQVVAATGRLSSSDPNLQNIPIRTPEGSRIRRAFVSCDPE 799 Query: 699 YVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAK 758 + +V ADYSQIELR++AH S+D L++AF G+DIHR AA+V + LE VTS+ RR AK Sbjct: 800 WRLVCADYSQIELRMLAHFSQDPALVSAFEHGEDIHRLVAAQVHQVALEDVTSDMRRIAK 859 Query: 759 AINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETL 818 A+NFG++YG S +GL+ L I R+ A ++D YF RY GV +ME + GY T+ Sbjct: 860 AVNFGVMYGQSPYGLSAALGISREAATTFIDEYFTRYAGVTTFMENVLDECLATGYARTI 919 Query: 819 DGRRLYLPDIKSS--NGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRM 876 GRR + ++ R AER IN +QG+AAD+IK AMI V L+ E ++ Sbjct: 920 LGRRRPIEGVRGPRERNRNRNMAERTGINTVIQGSAADLIKMAMIRVHHRLERENHPGQL 979 Query: 877 IMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 ++Q+HDELV E + + + + M LDVPL V+V G NW A Sbjct: 980 LLQIHDELVLEAPAHLAEELGALVSEEMTKALPLDVPLEVDVAIGTNWLDA 1030 >UniRef50_Q1V0V5 DNA polymerase I n=3 Tax=Candidatus Pelagibacter RepID=Q1V0V5_PELUB Length = 924 Score = 995 bits (2572), Expect = 0.0, Method: Composition-based stats. Identities = 375/944 (39%), Positives = 575/944 (60%), Gaps = 36/944 (3%) Query: 1 MVQIPQ-NPLILVDGSSYLYRAYHAFPPLTN-SAGEPTGAMYGVLNMLRSLIMQ------ 52 M +I + + L+DGS Y++RAY+A PPLT S G P GA+ G +ML L+ Sbjct: 1 MDKIKKTDHFYLIDGSGYIFRAYYALPPLTRKSDGLPVGAVSGFCSMLFKLLEDSKSNEN 60 Query: 53 -YKPTHAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSG 111 KPTH AV+FDA KTFR+E++ YK++R PDDL Q E + V A LP + + Sbjct: 61 LQKPTHFAVIFDAARKTFRNEIYSDYKANRSEAPDDLAPQFEYIRKSVVAFNLPSVDLPN 120 Query: 112 VEADDVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGV 171 EADD+I T + G V I + DKD+ QL ++ + + M N + PE++V K+GV Sbjct: 121 YEADDLIATYVEQILAKGAKVTIVSSDKDLMQLYRKDVRIFDPMKNKFITPEDIVTKFGV 180 Query: 172 PPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKT 231 PE +ID +L GDSSDN+PGVPG+G KTA L+ G L+ L ++I Sbjct: 181 GPEKVIDVQSLAGDSSDNVPGVPGIGVKTAAELINKYGTLEKLLDNAQEIK------QNK 234 Query: 232 MAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADV 291 L +NK+ A +S +L T+ D +E E+ +++ +L ++ EF R + V Sbjct: 235 RRETLIENKDKAIISKKLVTLMKDAPVERKLEEFHLKKIDKNKLYKFLREMEFNRLLSSV 294 Query: 292 EAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPV 351 + E + + PE IS NY I +E+ + WI + E+A Sbjct: 295 ISAYGEPLL---------EETAKETKPEKKHQNISKKNYHLITNEKEIDEWINEAEEAGE 345 Query: 352 FAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLED 411 A DTET SLD +LVG+S + + G A YIP+ H + + +E ++ LKPLLED Sbjct: 346 LAIDTETSSLDAHQTDLVGISLSTKIGKACYIPIGHKF---KGCLKKETVIKKLKPLLED 402 Query: 412 EKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTI 471 + K+GQN+K+D +L +GI + + DTML SY+L++ RH+MD+L+E L+HKTI Sbjct: 403 KSVKKIGQNIKFDFIVLYKHGINMNSME-DTMLMSYVLDAGKNRHNMDTLSEIHLQHKTI 461 Query: 472 TFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEM 531 +F+EI G GK ++ F+ + L++A YAAEDAD+T +L+ +L K + N++E E Sbjct: 462 SFKEIVGTGKKEINFSDVELDKAMEYAAEDADITYRLYKIFSKNL-KLEKLTNIYEIFEK 520 Query: 532 PLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILF 591 PL+ +L+ +E G+KID K L SE+ ++++LEK+ +I+ ++FN++S KQL I++ Sbjct: 521 PLIKILAFMEIEGIKIDNKFLKVLSEKFEKKISKLEKEVFKISKKKFNIASPKQLGEIIY 580 Query: 592 EKQGIKPLKKTPGGAPSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINP 650 I LKKT G+ +T+ VLE+LA + PK+IL++R ++KLK+TY+D LP INP Sbjct: 581 NDLKIAVLKKTRKGSFATNASVLEDLAFKGHEFPKLILDWRQVSKLKNTYSDALPEHINP 640 Query: 651 KTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIE 710 T RVHTS+ A T TGRL+S+DPNLQNIP+++E+G+ IR+AFIA + + ++SADY+QIE Sbjct: 641 NTKRVHTSFLLAATTTGRLASSDPNLQNIPIKSEDGKDIRKAFIAEKGFTLISADYNQIE 700 Query: 711 LRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSA 770 +RI+A L+ K L AF+ +DIH TA++VF + ++ V + RR AKAINFG+IYG+S Sbjct: 701 MRILADLAEVKELKKAFSNNEDIHSLTASQVFNVDIKKVDQDMRRKAKAINFGIIYGISQ 760 Query: 771 FGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKS 830 +GLA+Q+N+ EA ++++ YF ++P + YM+ T ++ GYV + GRR + I Sbjct: 761 YGLAKQINVSNHEADEFLNAYFLKFPEIKIYMDNTIKFCRKSGYVTNIFGRRSHFNGIND 820 Query: 831 SNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQA-EQPRVRMIMQVHDELVFEVH 889 N R ERAAINAP+QG+A++I++ AMI ++ ++ + + ++++Q+HDEL+FEV Sbjct: 821 KNFNVRNFQERAAINAPIQGSASEIMRLAMIRLNKKFESIKNNKSKILLQIHDELIFEVP 880 Query: 890 KDDVDAVAKQIHQLMENCTR-----LDVPLLVEVGSGENWDQAH 928 +V + + I M + T PL V+V +G+NW H Sbjct: 881 VKEVKNITEIIKDEMTSVTESDLHTFSTPLTVDVNTGDNWGILH 924 >UniRef50_C8QY72 DNA polymerase I n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QY72_9DELT Length = 914 Score = 992 bits (2565), Expect = 0.0, Method: Composition-based stats. Identities = 393/942 (41%), Positives = 546/942 (57%), Gaps = 58/942 (6%) Query: 5 PQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 + PL L+DGS+Y+YRAYHA PL+N+AG+PT A+YG L +I + P + A+ +D+ Sbjct: 3 SREPLYLIDGSAYIYRAYHAIRPLSNAAGQPTHAVYGFTTTLLRVIREKTPRYLAIAYDS 62 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 KG FR E++ YK++RP MP DL QI + +V A + L +GVEADD+I AR Sbjct: 63 KGPNFRHEIYPAYKANRPEMPADLACQIPYIKEVVSAYHITTLEQAGVEADDLIAAAARR 122 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMG 184 +P++I +GDKD+ QLV +TL + M +T + P V KY V P+ ++D+ AL+G Sbjct: 123 LAGPDQPLIIVSGDKDLLQLVNEWVTLWDPMQDTFMDPAAVAKKYQVSPQQLLDYFALIG 182 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 DSSDN+PGVPGVG KTA L+ G L+ L+A E+++ A + KL +++ A Sbjct: 183 DSSDNVPGVPGVGPKTAAKLIDQFGSLEQLFANLEQVS------AAKLREKLAAHRQDAQ 236 Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304 L+ +L +K D+EL + + + P ++L LF + EF R Sbjct: 237 LARRLIRLKDDLELPTSLDDYTLPPPDQDKLRQLFTELEFTRLIKS-------------- 282 Query: 305 AAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAP-VFAFDTETDSLDN 363 E+ A I+ D + I + L +A L P DTET SLD Sbjct: 283 --------------ELQAEKIAADAFQLINSLDQLHELVAILAADPAPLVIDTETTSLDP 328 Query: 364 ISANLVGLSF------------------AIEPGVAAYIPVAH---DYLDAPDQISRERAL 402 + A LVG+S A E G Y+P+AH D A +Q+ Sbjct: 329 LQAELVGISLTLAAPGSDESEAKASRTAAGENGACWYLPIAHRREDGSAAANQLPLAEVR 388 Query: 403 ELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLA 462 L PLL D++ LK+G NLKYD +L + + L DTM+ SY+++ H +D L+ Sbjct: 389 RALAPLLADDRRLKLGHNLKYDLQVLHRHDLPLAPPLADTMIASYLIDPSRRSHGLDVLS 448 Query: 463 ERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGP 522 E L+ + +F E+ + + F +A A Y+ ED T L P L + + Sbjct: 449 EELLQRRLTSFAEVTDRDRRPEAFAHVAPAAAAAYSCEDVAATRLLWQLFQPKLAELE-L 507 Query: 523 LNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSS 582 +F +E+ L+P+L+R+ER G+ +D +VL + E + L L K +++AG EFN++S Sbjct: 508 AELFYQVEITLLPILARMERVGILLDGQVLKELAAEFSQELERLSSKIYQLAGVEFNINS 567 Query: 583 TKQLQTILFEKQGIKPLKKTPGGA-PSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYT 641 +QL +LFE+ + +KT G ST LE LA + LP I+ R L+KLKSTY Sbjct: 568 PRQLGEVLFERLKLPHGRKTKGKTGYSTDIRELERLAAYHDLPAAIIAQRNLSKLKSTYV 627 Query: 642 DKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVI 701 DKL +INP GR+HTS++Q VTATGRLSS++PNLQNIPVR +EGRRIR AFIA + Sbjct: 628 DKLSTLINPADGRIHTSFNQTVTATGRLSSSNPNLQNIPVRTQEGRRIRGAFIAAPGHRF 687 Query: 702 VSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAIN 761 ++ADYSQI+LR++AH S D LL AF + +DIHR TAAE+F + VT++ RR AK IN Sbjct: 688 LAADYSQIDLRVLAHYSADPMLLEAFQQDQDIHRRTAAEIFRVNPAMVTADMRRVAKTIN 747 Query: 762 FGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGR 821 FG+IYGMSAFGLA QL RKEAQ ++D YFE Y GV +ME QA+ G+V TL R Sbjct: 748 FGIIYGMSAFGLAEQLRCSRKEAQVFIDRYFELYRGVKTFMEEIVEQARRDGFVRTLLKR 807 Query: 822 RLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVH 881 R LP+I SSN RR AER AIN P+QGTAADIIK A IA D L+ + ++Q+H Sbjct: 808 RRQLPEINSSNKLRREFAERTAINTPIQGTAADIIKLAAIACDRELRRKNFNTEALLQIH 867 Query: 882 DELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGEN 923 DEL+FEV +D+ AV K + Q MEN L VPL V + SG N Sbjct: 868 DELIFEVPEDEQAAVGKLVQQAMENVMELTVPLRVNLKSGPN 909 >UniRef50_A6CAX6 DNA polymerase I n=2 Tax=Planctomycetaceae RepID=A6CAX6_9PLAN Length = 900 Score = 992 bits (2565), Expect = 0.0, Method: Composition-based stats. Identities = 356/922 (38%), Positives = 540/922 (58%), Gaps = 33/922 (3%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 + L ++D S +++ +HA P +T G+PT A++G+ + ++I + P + D+ Sbjct: 2 KETLYIIDTFSLVFQVFHAVPAMTGPTGQPTNAIFGITRDILNIIKTHSPDYLIFAMDSS 61 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 G R++L+ YK++R MP+DL QI + +VK +P++ G EADDV T+AR A Sbjct: 62 GPGTRNDLYSEYKANRSAMPEDLVPQIPHIMDVVKGFQVPVIECPGWEADDVFATIARLA 121 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185 + G I T DKD QL+ +I L N N + E V +GV P+ +IDF +L+GD Sbjct: 122 NEKGIETTIVTNDKDARQLINDSIRLYNIRKNQFMDAEAVQADWGVRPDQVIDFQSLVGD 181 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 S DNIPGVP VG K AQ L++ G L+ + A +K G + L++ + A + Sbjct: 182 SVDNIPGVPLVGPKKAQTLIEQFGTLEGVLANADKAKG------PKLQQNLKEFADQARM 235 Query: 246 SYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPA 305 S +L T+ ++L + E + P E L LF + F+R+ D++ Sbjct: 236 SRELVTLNQSLDLNINWEASRLTHPDRERLHQLFVDFGFRRFAEDMK------------- 282 Query: 306 AKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNIS 365 E + PE + TI + + ++A L++ F D ET L Sbjct: 283 ----EVLSTEAPPEPVERIRE-----TIDTKPAFETFLALLKEQDEFCVDLETTGLKPAE 333 Query: 366 ANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDR 425 A +VG + + E YIPV + + + LE LKP+LED + L QN+KYD Sbjct: 334 AEIVGWAISWEKHRGFYIPV--EGPSGQLALDPQYVLEHLKPILEDPEILITNQNIKYDM 391 Query: 426 GILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLT 485 +L G+ L+G++ D M+ SY++++ H +D L+ER+L H I E+ G GK Q Sbjct: 392 VVLMRVGVFLQGVSIDPMVASYLISAGERGHSLDKLSERYLNHTMIPISELIGSGKQQKK 451 Query: 486 FNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGV 545 ++ +++ YA EDA++ QL + +L KH G ++ +E PL+ +L+ +E G+ Sbjct: 452 MFEVDVDKVAEYAVEDAEIAWQLSRILQDEL-KHAGLWELYWELERPLISILAEMEFTGI 510 Query: 546 KIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGG 605 K+D L S+ L RL L + HEIAG EFN++S QL+T+LFE+ + KKT G Sbjct: 511 KVDTAELKQQSQLLEKRLTTLISEIHEIAGHEFNIASPLQLRTVLFEELNLPVFKKTKTG 570 Query: 606 APSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTA 665 PST + VLE+LA + LP I E+R L+KLKSTY D LP ++NP+TGR+H S++Q V A Sbjct: 571 -PSTDQSVLEKLAPLHALPARITEHRHLSKLKSTYLDALPGLVNPETGRIHASFNQVVAA 629 Query: 666 TGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIELRIMAHLSRDKGLL 724 TGRLSS+DPNLQNIPVR +EGR+IR+AFI E++ ++ ADYSQIELRI+AHLS+D L Sbjct: 630 TGRLSSSDPNLQNIPVRTQEGRQIRKAFIPQDENWRLLCADYSQIELRILAHLSQDVALS 689 Query: 725 TAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEA 784 AF EG DIH A A+++F +P + V S+ RR+AKA+NFG+IYG S FGL+ + IP+ EA Sbjct: 690 QAFREGADIHTAVASDIFRVPHDQVDSDMRRTAKAVNFGVIYGQSPFGLSEAIGIPQSEA 749 Query: 785 QKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAI 844 +++ YF RY GV E++++ +Q +VET+ GR+ + ++ + ER AI Sbjct: 750 AGFIEDYFVRYQGVREFLDQILEDCAKQKFVETICGRKREIQGVRGGVQKQLNMPERTAI 809 Query: 845 NAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLM 904 N +QG+AAD+IK+AM+ V ++ EQ RM+MQ+HDELVFEV +D + + + M Sbjct: 810 NTVIQGSAADLIKQAMLNVSDRIKQEQHPGRMLMQIHDELVFEVPLTALDTLGLIVREEM 869 Query: 905 ENCTRLDVPLLVEVGSGENWDQ 926 E+ L+VPL+V++ SG NW + Sbjct: 870 ESAMDLEVPLIVDMSSGLNWLE 891 >UniRef50_Q7UI29 DNA polymerase I n=1 Tax=Rhodopirellula baltica RepID=Q7UI29_RHOBA Length = 1027 Score = 991 bits (2563), Expect = 0.0, Method: Composition-based stats. Identities = 359/932 (38%), Positives = 536/932 (57%), Gaps = 35/932 (3%) Query: 3 QIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 + +++VD S +Y+ +HA PP+T++ G P A+YG + + L+ + P + F Sbjct: 124 DLTDKLVVVVDAHSLIYQVFHALPPMTSTGGLPVSAVYGFVGDMLELLSRKNPDYLIAAF 183 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 D TFR+EL+ YK++R MPD+LR QI + + AMG+ ++ SG EADD++ T+A Sbjct: 184 DKSEVTFRNELYPEYKANRDSMPDELRQQIPLIRQAIDAMGIGIIEQSGFEADDLLATVA 243 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLAL 182 + E+AG L+ T DKD QL++ + N + + E+ +G+ P+ ++D+ AL Sbjct: 244 AKVEEAGGRCLVVTSDKDCRQLISDQTKIYNIRKDQEIDAAELFGLWGIRPDQVVDYQAL 303 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 +GD DN+PG+ +G K AQ LL+ L+ + E I+G K L +E Sbjct: 304 VGDPVDNVPGISLIGPKIAQQLLETHDTLEEILNNAESISG------KKRKENLMNGREA 357 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A +S +L +K DVE + + E + L +++ F+R + A + L + Sbjct: 358 AMMSRELVELKRDVESPIPWNRCVRSAADLERVDALLQEFGFRRLRSR--AAELLGGEAP 415 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 KP S Y TI +E LKA +L K V A DTET S Sbjct: 416 VEEPKPAWESR----------------YQTITNESELKALAVELAKQTVLAIDTETTSTH 459 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 +LVG+S A +PG AAYIPV D I+ +E+L+ +LE KVG NLK Sbjct: 460 ARGCDLVGISIAWQPGEAAYIPV--RAPDGDPAINELIVIEILRDVLESSAIEKVGHNLK 517 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 +D +L + G++L GI DTM+ Y+LNS H +D LA+R L H ++ +++ G GK Sbjct: 518 FDVIVLRSAGVQLGGITMDTMVADYLLNSGGRNHGLDDLAQRRLDHTNLSIKDLIGTGKK 577 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 Q+T +Q+ +++ YA ED DV ++L + +L + G +F+ +EMPL VL+ +E Sbjct: 578 QITMDQVPVDDVSPYACEDVDVPIRLAPTLRDELNES-GLDGLFDEVEMPLTEVLAEMEF 636 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 NG+ ++ L SE +A+L AG EFNL S KQL +LFE+ G+ +KKT Sbjct: 637 NGIHVNADTLAKMSERFDKDIADLRALVFSAAGHEFNLDSPKQLGVVLFEELGLPVIKKT 696 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST +VL +LA+++ + + +L+YR KLK+TY D LP +I KTGRVHTS+ Q Sbjct: 697 KTGV-STDADVLSQLAVNHEIAEHVLQYRQATKLKNTYIDALPQLICDKTGRVHTSFRQD 755 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIELRIMAHLSRDK 721 V ATGRLSS++PNLQNIP+R E+G+ IR AF A E + ++ ADYSQIELR++AH S D+ Sbjct: 756 VAATGRLSSSEPNLQNIPIRTEQGKAIRAAFTAGREGWSLLGADYSQIELRVLAHYSGDE 815 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 L+ A+ + DIH AAEV G+ VTS+ RR AK INFG++YG S FGLA+ L I Sbjct: 816 ALIGAYHDDADIHTRVAAEVNGIEESEVTSDLRRIAKTINFGIVYGQSPFGLAKTLGISN 875 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKS----SNGARRA 837 EA+ Y++LYF+RY GV +M T A+ + +GYV T+ GRR + ++ RR+ Sbjct: 876 DEARDYIELYFQRYSGVEAFMMDTLARCRNEGYVATMLGRRREIKGVRDLAKLPESKRRS 935 Query: 838 --AAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDA 895 ER AIN P+QGTAAD+IK AM+ V L+ + R+++Q+HDEL+ E +++DA Sbjct: 936 LTEPERIAINMPIQGTAADLIKLAMLRVHEQLKQSDLQARLLLQIHDELLLESPDEELDA 995 Query: 896 VAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 ++ I + M + LDVPL V+V G W Sbjct: 996 LSDTIREAMTSVMELDVPLKVDVAHGRTWADC 1027 >UniRef50_A6TSU6 DNA polymerase I n=13 Tax=Clostridiaceae RepID=A6TSU6_ALKMQ Length = 897 Score = 990 bits (2559), Expect = 0.0, Method: Composition-based stats. Identities = 350/925 (37%), Positives = 547/925 (59%), Gaps = 36/925 (3%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 ++++DG+S + RA++A PPLTN G+ T A+YG + ML ++ Y P + +V FD K Sbjct: 4 KRMVIIDGNSLINRAFYALPPLTNKEGQHTNAIYGFMTMLLKVMDDYDPQYISVAFDRKA 63 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 TFR + FE YK+ R MP +L Q+EPL ++ A + + + G EADD+IGTL++ AE Sbjct: 64 PTFRHKSFEGYKAGRKKMPPELAEQLEPLKEVLDAFHIYRVEIDGFEADDLIGTLSKYAE 123 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLAL 182 + LI TGDKD QL + + ++ T I P++++ +Y V PE ID L Sbjct: 124 EQDIECLIVTGDKDALQLASEKVKILFTKKGISSLEIYDPQKIMEQYEVTPEQFIDLKGL 183 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 MGD+SDNIPG+PGVGEKTA LL+ G ++ L +I+ A+ + K+E N E Sbjct: 184 MGDNSDNIPGIPGVGEKTAIKLLKQFGTVENLIQNAGEIS------AQKLREKVENNTEQ 237 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A +S +LATI T+V +E+ E+L+ E++L LFKK+EF V A K Sbjct: 238 AMMSKRLATIMTNVPVEIELEKLKKIAIDEEKVLALFKKFEFNTLIGRVIARKEEVDGEV 297 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 + +A I + + LK ++ T+T+ + Sbjct: 298 VVKQEKMTNEIAQ-----------------ITNIDELKKAFDEVRAGKQMILQTKTEEEN 340 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 + +++ ++F++ YI V D +E L +K +LEDE+ K+G ++K Sbjct: 341 IVLDHILAITFSVNGEKLYYIDVR-------DFSDKEALLIQIKEVLEDEEIHKIGHDIK 393 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 ++ + IE++ + FDTM+ Y+++ + + LA +++ + ++ EE+ GKGKN Sbjct: 394 HEIRHFYVHDIEMKNVTFDTMIGEYLIDPAKSSYALKDLAAQYIGQEVMSEEELRGKGKN 453 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 ++ + E+ +Y + V +++ ++ +Q+ + ++ +E+PLV VL+ +E Sbjct: 454 LISIGEAPKEDLMKYLCQRVSVIGKIYPEIKAKMQELE-LEKLYYEVELPLVEVLAAMEY 512 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 G+K+D +L E ++ L K HE+A FN++S KQL +LFEK + P+KKT Sbjct: 513 KGIKVDRSMLEILEIEFGEQIDLLTKAIHELAETNFNINSPKQLGEVLFEKLELPPIKKT 572 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST+ EVLE+L + + ILEYR + KLKSTY D L +INP+TGR+H++++Q Sbjct: 573 KTGY-STNAEVLEKLQDQHDIIPKILEYRQVTKLKSTYVDGLLNIINPETGRIHSNFNQT 631 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKG 722 VT TGR+SST+PNLQNIP++ E GRR+R+ F+A E++ + ADYSQ+ELR++AH+ D+ Sbjct: 632 VTTTGRISSTEPNLQNIPIKLEMGRRLRKVFVANENHQFIDADYSQVELRVLAHICEDEN 691 Query: 723 LLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRK 782 LL AF + +DIH TAAE+F +P+E VT R SAKA+NFG++YG+S +GL++ LNI R Sbjct: 692 LLDAFLKNQDIHTRTAAEIFDVPMEEVTDSMRSSAKAVNFGIVYGISDYGLSQNLNITRV 751 Query: 783 EAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERA 842 +A+KY+D Y ++YP V YM+ QA +QGYV TL RR YLP++KS N R+ ER Sbjct: 752 KAKKYIDNYLDKYPSVKRYMDEIVEQAHQQGYVVTLFNRRRYLPELKSRNFNIRSFGERM 811 Query: 843 AINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQ 902 A+N P+QG+AADIIK AM+ V L+ + ++I+QVHDEL+ E ++V+ K + + Sbjct: 812 AMNTPIQGSAADIIKIAMVNVYRRLKEQGLTSKLILQVHDELIVEAPDNEVEVAIKIVRE 871 Query: 903 LMENCTRLDVPLLVEVGSGENWDQA 927 ME L V L V++ NW A Sbjct: 872 SMEEAMNLKVQLKVDLAYANNWYDA 896 >UniRef50_Q2GBP7 DNA polymerase I n=10 Tax=Alphaproteobacteria RepID=Q2GBP7_NOVAD Length = 945 Score = 986 bits (2550), Expect = 0.0, Method: Composition-based stats. Identities = 407/954 (42%), Positives = 551/954 (57%), Gaps = 43/954 (4%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYK----PTHAAVV 61 + L LVDGS+Y++RAYH PPLTN G P GA+YG ML L PTH AV+ Sbjct: 4 KQHLYLVDGSAYIFRAYHRLPPLTNPRGVPVGAVYGYTTMLWKLAEDLHKADGPTHLAVI 63 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 D G +FR++L++ YK++RPP P+DL Q + +A L + +EADD+I + Sbjct: 64 LDKAGTSFRNDLYDQYKANRPPPPEDLVPQFPLIRDATRAFSLACIEEDALEADDLIASY 123 Query: 122 AREAEKAGRPVLISTGDKDMAQLVTPN------ITLINTMTNTILGPEEVVNKYGVPPEL 175 AR A G V I + DKD+ QLV I +++TM N + EVV K+GVPPE Sbjct: 124 ARAATLRGWDVTIVSSDKDLMQLVGKCATGGGCIDMLDTMKNQRIDIPEVVEKFGVPPEK 183 Query: 176 IIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAK 235 + D LALMGDS DN+PG+ G+G KTA L+Q G L++ A + A + Sbjct: 184 VGDVLALMGDSVDNVPGIRGIGPKTATKLIQEHGDLESALAAAPTMK------AGKLRES 237 Query: 236 LEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGK 295 L + E+A LS L +K D L + E ++ Q + L +++ F ++ GK Sbjct: 238 LIEQAEMARLSRVLVALKEDCPLPVPIEDFKLGQIPRDPLAAFLEEHGFTSLLRRLDDGK 297 Query: 296 WLQAKGAKPAAKPQETSVADEAPEVTATVI------SYDNYVTILDEETLKAWIAKLEKA 349 + + A APE + Y + L+ WIA+ +A Sbjct: 298 GSPGPKTQLNPAKPDNKAAPAAPEGNRQALPSWPAPDLSAYACVQSMGELQQWIARAFEA 357 Query: 350 PVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLD----APDQISRERALELL 405 V A DTET +LD + A+LVG+S A+ P A YIP+ H D P Q+ R AL L Sbjct: 358 RVVAIDTETSALDAMRADLVGVSLALGPNDACYIPLGHGGSDMFAEKPLQVDRAEALAAL 417 Query: 406 KPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAG-----RHDMDS 460 KPLLE + LKVGQN+KYD ILA GI + I DTM+ S+ L++ H MD Sbjct: 418 KPLLESDAVLKVGQNIKYDLNILARQGIMVSPI-DDTMVMSFCLDAGRSETGLAGHGMDE 476 Query: 461 LAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHK 520 L+ER L H T+ F+E+ G GK ++F ++ L +A RYAAEDADVT +LH P L Sbjct: 477 LSERHLLHTTMKFKELCGTGKKAISFAEVPLADATRYAAEDADVTWRLHRLFQPRLAGEG 536 Query: 521 GPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNL 580 G +++ ++ PL+PV++ +ERNG+K+D + L S E ++A LE HE G F + Sbjct: 537 GTR-IYQKVDRPLIPVVAMMERNGIKVDRERLSGLSTEFAAQIARLEGVIHEKCGMSFTI 595 Query: 581 SSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALD-YPLPKVILEYRGLAKLKST 639 S KQL +LF+K G K KK G ST + VLE LA + ++LE+R L+KLKST Sbjct: 596 GSPKQLGEVLFDKLGYKGGKKGKTGQYSTDQSVLEGLAAQGAEVATLVLEWRQLSKLKST 655 Query: 640 YTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY 699 YTD L INP TGRVHTSY TGRLSS +PNLQNIP+R E GR+IR AF+A Sbjct: 656 YTDALQAAINPHTGRVHTSYSLVGAQTGRLSSNEPNLQNIPIRTEIGRQIRDAFVAEPGN 715 Query: 700 VIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKA 759 V+++ADYSQIELR+ AH++ L AFA G+DIH TA E+FG TV + R AK Sbjct: 716 VLLAADYSQIELRLAAHMADVPALKEAFAAGEDIHARTAMEMFG----TVDRDTRGRAKT 771 Query: 760 INFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLD 819 INF ++YG+S +GL +L + EAQ +D YFER+PG+ Y+ T +E+GY ETL Sbjct: 772 INFAILYGISRWGLGGRLGVSADEAQAMIDRYFERFPGIQRYIHETLESVRERGYSETLF 831 Query: 820 GRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPR-VRMIM 878 GR+ + P I S N A R +ERAAINAP+QGT+ADIIKRAM + L VRM++ Sbjct: 832 GRKTWFPRISSKNQAERQGSERAAINAPIQGTSADIIKRAMARMMPALTEAGLGHVRMLL 891 Query: 879 QVHDELVFEVHKDDVDAVAKQIHQLM----ENCTRLDVPLLVEVGSGENWDQAH 928 QVHDELVFE+ + DV+A I ++M E +L VPL VE+G+G +W AH Sbjct: 892 QVHDELVFELPQGDVEAAKPVIERVMATAAEPAVKLSVPLGVEIGTGLSWGAAH 945 >UniRef50_B0MYJ0 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MYJ0_9BACT Length = 959 Score = 986 bits (2549), Expect = 0.0, Method: Composition-based stats. Identities = 395/975 (40%), Positives = 567/975 (58%), Gaps = 70/975 (7%) Query: 7 NPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 L LVD + +++ Y+AF P+ N AG T ++G LR + + P V FD Sbjct: 2 KKLFLVDAYALIFKYYYAFMGRPMRNRAGMNTSVVFGFTKFLRDIQKREHPDLLGVAFDP 61 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 KG +FR E+F YK++R P+D+ + + +V+AM +P+L V G EADDVIGTLA + Sbjct: 62 KGGSFRREIFPEYKANRAETPEDILLSVPYVKRIVEAMCIPVLEVPGYEADDVIGTLAHK 121 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTN---TILGPEEVVNKYGVP-PELIIDFL 180 +AG V + T DKD QLV N + N I+G E + KYG+ P+L+ D L Sbjct: 122 GVEAGYDVFMVTPDKDYGQLVCDNCKIYKQKGNDGIEIVGREAIREKYGIENPQLVRDIL 181 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 AL GD+SDNIPGVPG+GEKTA L+Q G ++ + ++I K+ + Sbjct: 182 ALWGDASDNIPGVPGIGEKTACKLVQEWGTVENILQNADRIKS-------RQGEKIAEWG 234 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEA------- 293 + L+ +L TI DV ++ E L V P +EL LF + +F+ + D+ Sbjct: 235 DKLLLAKRLTTICLDVPIDFREEDLTVCAPRIDELKALFAELDFRMFLNDLTNLAPAEPL 294 Query: 294 --------------------------GKWLQAKGAKPAAKPQETSVAD-----------E 316 Q PAA E+ +D E Sbjct: 295 PEGPRQAAQTQLAEVARAKSAAAKKAALAGQGDLFAPAADSGESPASDRESASSDEQTAE 354 Query: 317 APEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIE 376 + E + Y + + + L+A + ++ P F FDTET D + +VGLS A+ Sbjct: 355 SEEFATAQTTPHAYTIVRNAQELEAVLREVAACPEFCFDTETTGFDIFNDRIVGLSLAVR 414 Query: 377 PGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELR 436 P A YIP ++ + L++PL D K K+GQN+K+D +LA G+E+R Sbjct: 415 PYEAWYIPF--------NESNTAEYAALIRPLFADGKIAKIGQNIKFDLMVLARLGVEIR 466 Query: 437 GIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGR 496 G +DTM+ Y+L+ RH+MD+LA R+L ++ I+ + GKG QLT + I+LE Sbjct: 467 GRLYDTMILHYLLDP-ESRHNMDALAMRYLNYRPISITSLIGKGARQLTMDMISLERVAE 525 Query: 497 YAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHS 556 YAAEDADVTL+L +WP +++ ++ IE P++ VL+ IE GV+ID + L ++ Sbjct: 526 YAAEDADVTLRLKQVLWPKVEELD-LAGLYLEIEEPMIAVLAEIEMAGVRIDSEALAEYA 584 Query: 557 EELTLRLAELEKKAHEIAGEE-FNLSSTKQLQTILFEKQGI-KPLKKTPGGAPSTSEEVL 614 EL L +LE +A E N++S +QL +LF K I + K T ST EE L Sbjct: 585 VELNKTLNDLEGDIRRLADEPSLNVNSARQLGEVLFGKLRIAEKPKMTKTKQFSTEEEYL 644 Query: 615 EELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDP 674 + A Y + ILEYRG+ KL STY + LPL++NP TG++HTS++QAVTATGRLSST+P Sbjct: 645 QTFAHKYEIVDKILEYRGVKKLLSTYVEALPLLVNPVTGKIHTSFNQAVTATGRLSSTNP 704 Query: 675 NLQNIPVRNEEGRRIRQAFIAPED-YVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDI 733 NLQNIPVR+E GRRIR+AFI +D ++++SADYSQ+ELR+MAHLS D+ L+ AF G+D+ Sbjct: 705 NLQNIPVRDELGRRIRKAFIPSDDEHLLLSADYSQVELRLMAHLSGDESLIAAFEHGEDV 764 Query: 734 HRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFE 793 H ATAA +FG + V S++RR AK NFG+IYG+SAFGL+++L+IPRKEA++ ++ YF Sbjct: 765 HAATAARLFGKEVAEVDSDERRKAKTANFGIIYGISAFGLSQRLDIPRKEAKEIIEGYFA 824 Query: 794 RYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAA 853 YP V EYM+R +AK GYV T+ GRR YL DI S N R AER A+NAP+QG+AA Sbjct: 825 SYPKVKEYMDRVVEEAKRDGYVSTIFGRRRYLNDIASRNAVARGLAERNAVNAPIQGSAA 884 Query: 854 DIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVP 913 DI+K AMI V + E R ++I+QVHDELV ++ + + + V + + ME+ L V Sbjct: 885 DIMKIAMIRVSRRFREEGIRSKVILQVHDELVVDMLRSEQERVIAIVTEAMESAAALRVR 944 Query: 914 LLVEVGSGENWDQAH 928 L+V+ G G+NW +AH Sbjct: 945 LVVDCGVGDNWLEAH 959 >UniRef50_Q11NX3 DNA polymerase I n=11 Tax=Bacteria RepID=Q11NX3_CYTH3 Length = 946 Score = 986 bits (2549), Expect = 0.0, Method: Composition-based stats. Identities = 397/961 (41%), Positives = 557/961 (57%), Gaps = 55/961 (5%) Query: 7 NPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 L L+D + +YRA+ AF P S G TGA++G N L ++++ KPTH V FD Sbjct: 2 KKLFLLDAMALIYRAHFAFSKNPRVTSTGISTGAVFGFTNSLLEILLKEKPTHIGVAFDL 61 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 +G TFR + F YK++R P+D+ I ++ +++ M +P+L V G EADD++GT ++ Sbjct: 62 QGPTFRHDNFTEYKANRQEQPEDISVAIPYIYRLLEGMNIPILGVPGYEADDIVGTFSKI 121 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTM----TNTILGPEEVVNKYGV-PPELIIDF 179 A G V + T DKD QLV ++ L I +V+ K+ + + + D Sbjct: 122 APPLGFDVYMMTMDKDYMQLVNEHVFLYRPAYMGNDVEIYDINKVLAKFNIKEVDQVRDI 181 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 L L GD+ DNIPG+PG+GEKTAQ L+ G ++ L +++ G + Sbjct: 182 LGLQGDTVDNIPGIPGIGEKTAQKLIADFGSVENLIKNADQLKG-------KQKENVINF 234 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADV-------- 291 LS +LATI +V +E E L V++ E L LF + EF+ + Sbjct: 235 AAQGLLSKELATIHCEVPIEFDEEALRVKEYNIEALDQLFDELEFRTLKKRLFGNSSSAS 294 Query: 292 EAGKWLQAKGAKPAAKPQETSV---------------ADEAPEVTATVIS------YDNY 330 E K ++ K K +A T DE E T++ +Y Sbjct: 295 ETEKKMETKATKKSAAVSSTGQMGLFGMEAAETITEEFDEKGESKETIVRDTIDTVLHDY 354 Query: 331 VTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYL 390 + E + L F FDTET SL+ + A LVGL+ + A YIP Sbjct: 355 YVVDTEAEIVRLTNLLLLQESFCFDTETTSLNALEAELVGLAISFRAKEAYYIPFT---- 410 Query: 391 DAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILN 450 DQI +R L+LL+P E KVGQNLKYD +L Y + G FDTML Y+L Sbjct: 411 --SDQIQTQRILDLLQPAFEKSSITKVGQNLKYDLLVLKKYNFAIAGPLFDTMLAHYLLE 468 Query: 451 SVAGRHDMDSLAERWLKHKTITFEEIAGK-GKNQLTFNQIALEEAGRYAAEDADVTLQLH 509 RH MD+LAE +L + ++ E++ GK G Q T + +E YAAEDAD+T QL+ Sbjct: 469 P-EMRHGMDTLAEVYLNYTPVSIEQLIGKKGAKQGTMRDVEIEAIKEYAAEDADITFQLY 527 Query: 510 LKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKK 569 P L K + +F +EMPL VL+ +E GVKID + L S L + +EK+ Sbjct: 528 KFFSP-LVKDQNLNPLFNEVEMPLSEVLADMELEGVKIDTQALSEFSSLLQTEITAVEKE 586 Query: 570 AHEIAGEEFNLSSTKQLQTILFEKQGIKP-LKKTPGGAPSTSEEVLEELALDYPLPKVIL 628 +E AG +FN+SS KQL ILF+K + P KKT G +T E+VL +L D+P+ IL Sbjct: 587 IYEHAGVQFNISSPKQLGEILFDKLKLDPNAKKTKTGQYATGEDVLTKLDSDHPILANIL 646 Query: 629 EYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRR 688 +YR KLKSTY D LPL++ K GRVHTS++QAV ATGRLSST+PNLQNIP+R + G+ Sbjct: 647 DYREFQKLKSTYVDALPLLL-GKDGRVHTSFNQAVAATGRLSSTNPNLQNIPIRTDRGKE 705 Query: 689 IRQAFIAPE-DYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLE 747 IR+AF+A + D+VI+SADYSQIELRIMA S+D+ +L AF +G DIH TA++VF +P+E Sbjct: 706 IRRAFVARDNDHVILSADYSQIELRIMAAFSKDESMLNAFRKGVDIHSTTASKVFKVPIE 765 Query: 748 TVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRA 807 VT++ RR AK +NFG+IYG+SAFGL+++L+IPRKEA + + YF +P V YM+ Sbjct: 766 DVTADMRRKAKMVNFGIIYGISAFGLSQRLSIPRKEAAEIITAYFTEFPAVKAYMDACVN 825 Query: 808 QAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWL 867 A+E YVET+ GRR +L DI S N R AER AINAP+QG+AAD+IK AMI + W+ Sbjct: 826 SAREVEYVETILGRRRFLRDINSRNMTMRGFAERNAINAPIQGSAADMIKVAMIRIHDWM 885 Query: 868 QAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 + E + +M++QVHDEL+F+ HKD++D + Q+ M+ LDVP+ V +G GENW +A Sbjct: 886 KKENLKSKMVLQVHDELLFDAHKDEIDLLKTQVEIFMKEAIALDVPMEVGMGIGENWLEA 945 Query: 928 H 928 H Sbjct: 946 H 946 >UniRef50_D2R075 DNA polymerase I n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R075_9PLAN Length = 966 Score = 985 bits (2548), Expect = 0.0, Method: Composition-based stats. Identities = 357/958 (37%), Positives = 525/958 (54%), Gaps = 40/958 (4%) Query: 2 VQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 + + + ++D S +Y+ +HA P +T+ +G+P GA+ G + + LI + Sbjct: 12 TPLGDSTVYVIDAHSLIYQVFHAMPEMTSPSGQPVGAVQGFVRDMLDLIENRSAEYIVAA 71 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 FD TFR ++E+YK HR MP DL++QI + + A+G+ L++ G EADD++ TL Sbjct: 72 FDHPSPTFRHTMYENYKVHRDEMPGDLQSQIPIIQQFLDALGITQLSIPGFEADDILATL 131 Query: 122 AREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLA 181 A+ G L+ T DKD QL+ + ++N N I ++ +G+ P+ ++DF + Sbjct: 132 AKRVASDGGRCLVVTSDKDCRQLINDRVQMLNLRKNEIFDDVALMATWGIRPDQVVDFQS 191 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 L+GDS DN+PGVP +G K AQ LL L+ + ++++G L+ ++ Sbjct: 192 LVGDSVDNVPGVPLIGPKIAQELLAKYETLEGVLDNADQVSGA------KRKENLKNFRD 245 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEA-------- 293 A+LS L +K D+E +L + V + E L+ L + F++ +E Sbjct: 246 QAFLSRDLVRLKNDMEFDLDWSSVRVGRYQIEMLMELCRACGFRQLLTRIEKLAKRGAPA 305 Query: 294 -------------------GKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTIL 334 A A +TS + A Y + Sbjct: 306 KSSRSTGYSSSIPAPQRDRDTPPDELYAGTEAADSQTSPSGSLGPQVAAAPWEATYRRVE 365 Query: 335 DEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPD 394 + L+ I +++ A DTET S+ A +VG SF G A Y+P+ + Sbjct: 366 SLDQLRTIIDEIKAAGSLVIDTETTSVQPRWAEIVGYSFCYRDGEAWYLPIRAPENEQAL 425 Query: 395 QISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAG 454 + +L +P+LED KVGQN+KYD +L + GIELRG AFDTM+ Y+++ Sbjct: 426 CLDATAVADLFRPVLEDPAIAKVGQNIKYDMVVLRSAGIELRGAAFDTMVADYLIDPGER 485 Query: 455 RHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWP 514 H++D LA R L H+ I E + G GK Q+ +Q+ L YAAEDA V +L + P Sbjct: 486 SHNLDELARRHLGHQNIEIESLIGTGKKQIRMDQVPLAAITDYAAEDALVPYRLLPILEP 545 Query: 515 DLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIA 574 L++ G + +F ++EMPLV VL+ +E G+K+D L S + + ++ LE + + I Sbjct: 546 RLEQ-DGLVPLFRDLEMPLVEVLAELEHRGIKVDRARLVELSTDFSTKITALENEIYAIN 604 Query: 575 GEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLA 634 EFN+ S QL +LFE + LKKT G PS EVLE+LA + LPK +LEYR LA Sbjct: 605 HGEFNIDSRLQLAKLLFEDLKLPILKKTKTG-PSMDAEVLEDLARLHELPKKVLEYRHLA 663 Query: 635 KLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFI 694 KL+STY D L +I+P TGRVHTS Q V ATGRLSS DPNLQNIPVR EGR IR AF Sbjct: 664 KLRSTYVDSLQELIHPVTGRVHTSLKQDVAATGRLSSQDPNLQNIPVRTAEGRAIRSAFQ 723 Query: 695 AP-EDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQ 753 E + +++ADYSQIELR++AH S D L AFA +DIH A++V+ + VT E Sbjct: 724 PGIEGWKLMAADYSQIELRVLAHFSGDAALAEAFASDRDIHTQVASQVYEVAPGDVTPEM 783 Query: 754 RRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQG 813 RRSAKAINFG+IYG S FGLAR L I EA ++ YF +YPGV ++M T ++QG Sbjct: 784 RRSAKAINFGVIYGQSPFGLARSLGIENDEAAAFISAYFAQYPGVDDFMRETLIGCRKQG 843 Query: 814 YVETLDGRRLYLPDIKSS----NGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQA 869 YV T+ GRR + ++ + +R ER AIN +QG+AADIIKRAMI V L+ Sbjct: 844 YVTTIAGRRRPVTGVRDPHAVNDKRQRTLPERIAINTVIQGSAADIIKRAMITVHRRLKE 903 Query: 870 EQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 E+ + RM++Q+HDEL+FE ++ + + + M ++ VPL ++V +G NW Sbjct: 904 EKLQARMLLQIHDELLFEFPPEEQGQLRDLVVESMSTAEKISVPLKIDVKTGLNWADC 961 >UniRef50_C8PRX0 DNA polymerase I n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PRX0_9SPIO Length = 951 Score = 984 bits (2545), Expect = 0.0, Method: Composition-based stats. Identities = 382/964 (39%), Positives = 541/964 (56%), Gaps = 49/964 (5%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHA 58 M Q Q+ L L+D +YR+Y AF PLTN AGE A+YG L ++ Y+P + Sbjct: 1 MTQHTQDTLYLLDSYGLIYRSYFAFISHPLTNKAGENVSALYGFFRSLAMILKTYRPRYF 60 Query: 59 AVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVI 118 FD++ TFR E + YK+ R P+DL AQI + ++ A+G+ L G EADD+I Sbjct: 61 LAAFDSRTPTFRHEWYSEYKATRDKTPEDLHAQIPHIEKILTALGIACLRKDGFEADDII 120 Query: 119 GTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTIL---GPEEVVNKYGVPPEL 175 TLAR + + GR +I +GDKD+AQLV ++++ + L G EEV +GV P Sbjct: 121 ATLARRSAQEGRRCVIISGDKDLAQLVGDFVSVLKPDKSEALAQCGVEEVKAHWGVAPAQ 180 Query: 176 IIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAK 235 ++D+L+L+GDS+DNIPGV G+G KTA LLQ G LD +Y + IAG + K Sbjct: 181 MLDYLSLIGDSADNIPGVKGIGPKTAVKLLQDYGTLDAVYEHIDSIAG-------AVQKK 233 Query: 236 LEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRW-------- 287 L K+ AY S +L T+ +V +E T + E L K+YE R Sbjct: 234 LAAGKDSAYFSKKLITLADNVPIEGTLDDYRCTALHYAETAALLKEYELPRLGELYAKAA 293 Query: 288 -----------------TADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNY 330 ADV + A A + + Y Sbjct: 294 GESETAGSAAEQNTAAGKADVNTATAGKTGATTAADDIGTKPANSAAAQPAELRKNDGEY 353 Query: 331 VTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYL 390 T+ D + L+A IA+ E AFD ET L+ + +LVG S +++ G Y+P+ Sbjct: 354 RTVTDAKELEAVIAEAEAQGFAAFDCETTGLNPLYDSLVGFSLSLKAGTGIYVPLKAPAP 413 Query: 391 DAPDQ----ISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRG--IAFDTML 444 + +Q + A +LL L +++ V N K+D +L G+ R FDTM+ Sbjct: 414 ELGEQPFAVMPLAAAKKLLARLWNNKELTLVLHNGKFDYQVLRTAGVFTRAGCRLFDTMI 473 Query: 445 ESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADV 504 +++L +++L E L + + ++++ KG TF ++L +A YAAEDAD Sbjct: 474 AAWLLEPDNLSFGLENLTEAQLGLQGLDYKDVVPKG---CTFAAVSLPQATAYAAEDADF 530 Query: 505 TLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLA 564 TLQL+ P L++ +FE +EMPL+P+L+ +E G+ + + L SEEL LA Sbjct: 531 TLQLYHVYKPALEQA-NLTTLFETLEMPLMPLLADMEAQGIFLKKEELAAFSEELAGTLA 589 Query: 565 ELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLP 624 E + +++ G FN++S KQLQ +LF ++ + KKT G ST VLEELA LP Sbjct: 590 RDEAEIYKLVGHPFNIASPKQLQEVLFTERKLPTGKKTKTGY-STDISVLEELAAIDELP 648 Query: 625 KVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNE 684 IL+YR AKLKS Y D LPL+ + GR+HTS+ Q TATGRLSS DPNLQNIP+R E Sbjct: 649 AKILDYRASAKLKSGYADALPLLADA-NGRIHTSFIQTGTATGRLSSRDPNLQNIPIRGE 707 Query: 685 EGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGL 744 EGR+IR+AF A + ++SADY+QIEL I+AH S+D+ L+ AF +G D+H ATAA +F + Sbjct: 708 EGRKIRKAFYAADGCKLISADYAQIELVILAHFSQDENLVKAFRQGTDVHAATAALIFNV 767 Query: 745 PLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMER 804 P+E V + RR AK INFG++YGMSAF LA QL I R EA ++ YF Y GV +ME Sbjct: 768 PVENVVPDMRRIAKVINFGVMYGMSAFRLANQLRISRTEAADFITRYFTTYSGVAAFMET 827 Query: 805 TRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVD 864 + A E+G+VETL GRR Y+ I S N +RAAAER AIN P+QG+AADI+K AM+ VD Sbjct: 828 LKESAAEKGFVETLMGRRRYIRAINSRNQTQRAAAERIAINTPIQGSAADIVKTAMLHVD 887 Query: 865 AWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 L+ + +++QVHDEL+ E +VD+V + Q ME+ +L VPL V + SG W Sbjct: 888 RALKRQHLSAHLLLQVHDELILEAPDSEVDSVKALLKQEMEHVVKLAVPLRVSIESGSCW 947 Query: 925 DQAH 928 H Sbjct: 948 GDFH 951 >UniRef50_Q6X9S0 DNA polymerase I n=3 Tax=Bacillales RepID=Q6X9S0_9BACL Length = 903 Score = 984 bits (2544), Expect = 0.0, Method: Composition-based stats. Identities = 356/928 (38%), Positives = 515/928 (55%), Gaps = 36/928 (3%) Query: 8 PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 LILVDG+S RA++A L+ G T A+YG NML LI + +PTH V FDA Sbjct: 3 KLILVDGNSVANRAFYAVRLLSTRGGLHTNAVYGFANMLLKLIEEERPTHFLVAFDAGKA 62 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 TFR +E YK+ R P +L Q + +V+A G+ + EADD+IGTLA+ AE Sbjct: 63 TFRHREYEAYKAGRLQTPPELSEQFPYIRELVRAFGVASGELEEYEADDMIGTLAKRAEA 122 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLALM 183 G L+ TGD+D+ QLV+ +T+ T P + +YG P+ I D LM Sbjct: 123 EGVDTLVVTGDRDLLQLVSDRVTVALTRKGITETERYDPARIREEYGFDPDRIRDLKGLM 182 Query: 184 GDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVA 243 GD+SDN+PGVPGVGEKTA LL+ G L+++ +IAG + L + + A Sbjct: 183 GDASDNLPGVPGVGEKTALKLLRQYGSLESVLEHASEIAG-------KLGENLRAHADAA 235 Query: 244 YLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVE---AGKWLQAK 300 LS +LATI V L+ + L + +P L L ++ EFK + Sbjct: 236 RLSKRLATIDCAVPLQSGWDWLRLGEPDRAALASLLRQLEFKSLLKRLGLDGTSADADVD 295 Query: 301 GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDS 360 G + +A+P + ++ P A + E ++ +++LE A E Sbjct: 296 GVRSSARPAD----EKRPRAVAVAEEGVDVRCPDRPEEVEEALSRLEAAQSVV--VEVTG 349 Query: 361 LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN 420 + + G+++ + A +IP + + L L D + K + Sbjct: 350 DNPHDGEVRGVAW-WDGHTAYFIPFERLV---------QSDMRPLADWLADARRPKRTHD 399 Query: 421 LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG 480 L +G+ RG +F T + +Y+L+ RH + L+ R+ E++ GKG Sbjct: 400 SHRAEVALFWHGLAFRGTSFCTHIAAYLLDPTESRHTLADLSRRYGLPPVPEAEDVYGKG 459 Query: 481 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI 540 F + RY A + +L + DL G ++F ++E+PL L+ + Sbjct: 460 AK---FKVPDRDTLARYVGRKAALVARLVPLLEADLAAC-GMRSLFYDLELPLSSELAVM 515 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK 600 E GV++D L + EEL A++E++ +E+AG FN+ STKQL ILF+K G+ +K Sbjct: 516 ETVGVRVDAAALAAYGEELREAAAKVEREIYELAGTTFNIGSTKQLGEILFDKLGLPVVK 575 Query: 601 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 KT G ST +VLEELA +P+ + IL YR L KL+STY + L I P+TG++HT Y Sbjct: 576 KTKTGY-STDADVLEELAPYHPIVEKILHYRQLTKLQSTYIEGLLKEIRPQTGKIHTYYQ 634 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIELRIMAHLSR 719 Q + ATGRLSS PNLQNIP+R EEGR+IR+AF+ +++++ADYSQIELR++AH+S Sbjct: 635 QTIAATGRLSSQFPNLQNIPIRLEEGRKIRKAFVPSEPGWLMLAADYSQIELRVLAHVSG 694 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 D+ L AF G DIH TA +VFG+ + V + RR AKA+NFG+IYG+S FGLA+ LNI Sbjct: 695 DERLKEAFRTGMDIHTKTAMDVFGVSEDRVDARMRRQAKAVNFGIIYGISDFGLAQNLNI 754 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 RKEA +++ YF + GV Y ER QA+ GYV TL GRR YLPDI +SN R+ A Sbjct: 755 SRKEAAEFIRQYFAVFSGVKAYRERIVEQARRDGYVTTLLGRRRYLPDINASNYNLRSFA 814 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 ER A+N P+QGTAADIIK AM+ + ++ + RM++QVHDELVFEV D++DA+ + Sbjct: 815 ERTAMNTPIQGTAADIIKTAMVRLTRRMRDVGLKSRMLLQVHDELVFEVPPDELDAMREL 874 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWDQA 927 + +ME+ LDVPL V+V G +W A Sbjct: 875 VTDVMESAVPLDVPLKVDVSWGADWYAA 902 >UniRef50_Q04Q27 DNA-directed DNA polymerase n=4 Tax=Leptospira RepID=Q04Q27_LEPBJ Length = 921 Score = 983 bits (2542), Expect = 0.0, Method: Composition-based stats. Identities = 387/934 (41%), Positives = 559/934 (59%), Gaps = 26/934 (2%) Query: 7 NPLILVDGSSYLYRAYHAF--PPLTNSA-GEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 L+++DG ++++RAY+AF LTNS G+P+GA +G ML L+ Y PTH A+ FD Sbjct: 2 KRLLIIDGHAFVFRAYYAFGASNLTNSKTGKPSGATFGFFKMLFKLLQDYTPTHVAMTFD 61 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 G R + FE YK++R PMP+DLR QI+ + ++ +G +L + G EADD+IGTL Sbjct: 62 PGGPLERGKTFEDYKANRKPMPEDLRPQIKEVMETLEKIGFKVLKMEGHEADDIIGTLCE 121 Query: 124 EAEKAGRPVLISTGDKDMAQLVTP-NITLINTMTNTI----LGPEEVVNKYGVPPELIID 178 + +LI +GDKD+ QL+ NI ++ + V + G+ + I D Sbjct: 122 TYRTIAKEILIFSGDKDLYQLLEKKNIKMLRGKKGVTEFVEIDSAWVKEELGIDVKQIPD 181 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 ++ ++GD+SDNIPGV G+G+K A LLQ LD +Y KI ++ KL + Sbjct: 182 YMGIVGDTSDNIPGVKGIGDKGASKLLQEYKTLDGIYKNLNKIKN------PSIQTKLSE 235 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVE--AGKW 296 KE AYLS QLATI+ D++L +T + +E ++ + FK + + D+ AGK Sbjct: 236 QKENAYLSKQLATIRRDLKLGITEKDIETPDYKSDHAIVYFKSQGYNVLSKDLAKSAGKE 295 Query: 297 LQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDT 356 + A E++ P V Y I E L L K+ V + DT Sbjct: 296 VPKDAEVTDATADESAETKTIP-----VGEKGTYKLITTVEELSKICRGLPKSRVLSVDT 350 Query: 357 ETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQ-ISRERALELLKPLLEDEKAL 415 ET S + A L+G+SF+ + Y+ V + D+ S E E L P+L + Sbjct: 351 ETTSPNPAMAELLGISFSNQEKTGFYVSVKNSASLFQDKSFSLEEIREHLGPVLSSQ-VP 409 Query: 416 KVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEE 475 KVGQN+KYD +L N+G L I FDTML SY++ RH+MD LA+ L + TIT+++ Sbjct: 410 KVGQNIKYDLIVLENHGFILNNIQFDTMLASYVIQPEGRRHNMDVLAKDLLNYDTITYDD 469 Query: 476 IAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVP 535 + G GK + I E+ YAAEDAD+T +L+ + K G + NIEMPL+ Sbjct: 470 LVGTGKKKKELTDIDPEQVAEYAAEDADITFRLYQIFRKKI-KESGVEPILRNIEMPLIS 528 Query: 536 VLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG 595 VL+++E+ G+ +D + + + LE + H AG FN++STK+LQ ILF+ Sbjct: 529 VLAKMEKTGIALDVPYFEELARDFDREIRHLESEIHRQAGRSFNIASTKELQKILFDDLK 588 Query: 596 IKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRV 655 +K +KKT G ST EVLEEL ++P+ + +L+YR KLKSTY D LP M+NP+TGR+ Sbjct: 589 LKTVKKTQTGY-STDHEVLEELLGEHPIVEKLLDYRKYTKLKSTYVDALPKMVNPRTGRI 647 Query: 656 HTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPED-YVIVSADYSQIELRIM 714 HTSY+Q + ATGRLSSTDPNLQNIP+R+ EGR +R+ F D Y I+S DYSQIELRIM Sbjct: 648 HTSYNQTIAATGRLSSTDPNLQNIPIRDREGRLLRKGFTVDSDEYEILSLDYSQIELRIM 707 Query: 715 AHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLA 774 AH+S+D +L A+ G DIH TAA ++G+P + VT E R AK +NF +IYG++ +GL+ Sbjct: 708 AHISKDPAMLEAYNHGLDIHIRTAAALYGVPEKEVTPEMRDKAKVVNFSVIYGVTPYGLS 767 Query: 775 RQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGA 834 R L IPR EA+ +++ Y +YPGV YM+ A++ GYV+TL GRR + DI S++ + Sbjct: 768 RNLRIPRDEAKSFIERYMIQYPGVKSYMDSMVEFAEKNGYVQTLTGRRRPIVDINSTHKS 827 Query: 835 RRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVD 894 + AA+R AIN+P+QGT+AD+IK AMI + ++ + R RM++QVHDELVFEVHK + + Sbjct: 828 AKEAAKRVAINSPVQGTSADMIKIAMINIHEDIEKKHYRSRMLLQVHDELVFEVHKKEKE 887 Query: 895 AVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 + + MEN LD+P+LVE G NWD+AH Sbjct: 888 EFKISMKKHMENAMPLDLPILVEGKFGVNWDEAH 921 >UniRef50_Q2S226 DNA polymerase I n=4 Tax=Rhodothermaceae RepID=Q2S226_SALRD Length = 926 Score = 981 bits (2537), Expect = 0.0, Method: Composition-based stats. Identities = 368/928 (39%), Positives = 557/928 (60%), Gaps = 22/928 (2%) Query: 9 LILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L L+D S YRA++ F PL NS G+ T A YG N L LI + HAAVVFD Sbjct: 13 LYLIDAMSLAYRAHYIFISRPLINSKGQNTSAAYGFTNSLLKLIEDHDIEHAAVVFDEGE 72 Query: 67 K-TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 + TFR E+++ YK++R P P++L I + +V+ + +P+L V GVEADDVIG LA++A Sbjct: 73 EDTFRKEMYDDYKANRDPPPEELLENIPYIKEIVEGLDIPVLEVPGVEADDVIGALAKQA 132 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLA 181 E V+I + DKD QL++ +++ I + ++YG+ P +D LA Sbjct: 133 EADDADVVIVSPDKDFKQLLSDKVSIYKPAKGDQDFEIKTGDTFRDEYGLDPAQFVDMLA 192 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGDSSDN+PGV G+GEKTAQ LL+ ++ L + ++G K ++++ E Sbjct: 193 LMGDSSDNVPGVYGIGEKTAQKLLREYHSVENLIDHADDLSG------KRAREGMQEHAE 246 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 A LS +L I+T++++ L +L+ ++ E+L +F++ EF + + ++ Sbjct: 247 EARLSKRLVRIRTELDVGLDWHELQRRELDEEKLTAVFQELEFDSFGDRLGIEGGEGSEE 306 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 P +V +Y + EE L A+ +L + +AFD E S Sbjct: 307 ETDEDDPDLQFDFGPYEKVQELDPEAVDYEVVRTEEELHAFADRLGEEARYAFDAEATSR 366 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 D ++A+LVGLSF+ E A Y+P PD + L++L P+L K+G NL Sbjct: 367 DPMTADLVGLSFSSEAERATYVPTP-----LPDDTPTDAVLDVLGPVLA-RDTEKLGHNL 420 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 KYD +L +G+E+ G FDTM+ Y++ H++D +A L +K + ++ G Sbjct: 421 KYDLLLLKQHGVEVGGTLFDTMVAHYLVAPEEN-HNLDDVARSVLNYKMVPIADLIGDET 479 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 ++ + ++ +E A YA EDAD++ +L ++ L + L+V +IE PLV VL+ +E Sbjct: 480 DRDSMREVEVETAAPYACEDADISYRLADELEAQL-EDGNVLDVAHDIEFPLVHVLATME 538 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 G+++D VL L RL+ +E++ E+AGEEFN++ST+QL ILFEK + + K Sbjct: 539 HTGIRLDTDVLDEILAGLEERLSGIEEEVFELAGEEFNINSTQQLGEILFEKLDLPVVSK 598 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 TP G PST E VL+EL+ ++ +P ++L++R KLKSTY D L +++P+TGR+HTS++Q Sbjct: 599 TPTGKPSTKESVLQELSTEHEIPGLVLDWRSTYKLKSTYLDSLGELVHPETGRLHTSFNQ 658 Query: 662 AVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDK 721 TATGRLSS+DPNLQNIP+R E GR+IR+AF+ + + ++SADY+QIELRI+A +S D Sbjct: 659 TRTATGRLSSSDPNLQNIPIRTEMGRQIRRAFVPKDGWALLSADYAQIELRILAAMSGDD 718 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 + F EG DIH AA V+G+ E VT EQR AK +N+G+ YG+S +GLA+++ +P Sbjct: 719 AMRATFQEGGDIHTDAAARVYGIDPEDVTPEQRSKAKEVNYGIPYGISPWGLAQRMRMPV 778 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 EAQ + Y + YPGV + + +A+++GY ETL GRR YLPDI SSN R+AAER Sbjct: 779 DEAQDIIKQYRKSYPGVSQLLNELVEKAQDKGYAETLLGRRRYLPDIDSSNSNARSAAER 838 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 A+N P+QGT AD+IK AM + L + +M++QVHDELVFEV D++DA I Sbjct: 839 VAVNMPIQGTQADMIKIAMNRIHDRLAGDDWATQMLLQVHDELVFEVPPDELDAAQTMID 898 Query: 902 QLMENCTRL-DVPLLVEVGSGENWDQAH 928 M + L DVP+ V++ +G+NW +AH Sbjct: 899 DEMRDALPLDDVPVTVDMDTGDNWLEAH 926 >UniRef50_C6W4A8 DNA polymerase I n=44 Tax=Bacteria RepID=C6W4A8_DYAFD Length = 963 Score = 981 bits (2537), Expect = 0.0, Method: Composition-based stats. Identities = 398/975 (40%), Positives = 558/975 (57%), Gaps = 66/975 (6%) Query: 5 PQNPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 P + L L+D + +YRA+ AF P S G T A++G N L ++ + KPTH V F Sbjct: 4 PIHKLFLLDAMALIYRAHFAFIKAPRITSKGLNTSAVFGFTNTLLEVLQKEKPTHIGVAF 63 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 D TFR FE YK+ R P+D+ I + +++ M +P+L + G EADD+IGT+A Sbjct: 64 DTAAPTFRHVQFEAYKAQREAQPEDITVAIPLVKRLLRGMCIPILELDGYEADDIIGTIA 123 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINT----MTNTILGPEEVVNKYGVPP-ELII 177 +EA + G V + T DKD QLV I + +LG +++++++ + + +I Sbjct: 124 KEASREGFEVYMMTPDKDYGQLVEQYIHIYKPAFLGKGAEVLGVQQILDRWQIQRIDQVI 183 Query: 178 DFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLE 237 D L LMGD+ DNIPG+PGVGEKTAQ L+Q ++ L +I G + K+ Sbjct: 184 DILGLMGDAVDNIPGIPGVGEKTAQKLIQEYDTIENLITHAGEIKG-------KLGEKIR 236 Query: 238 QNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWL 297 +N + A LS QLATI V + E L + P AE + LF + EFK + G+ Sbjct: 237 ENFDKAVLSKQLATIDCKVPVPFDAEDLTICSPNAELIAELFDELEFKTLKTRILGGQPG 296 Query: 298 QAKGA--------------------------------KPAAKPQETSVADEAPEVTATVI 325 + GA +PAA + + + + + I Sbjct: 297 GSAGALSPRPASAQAPARKNAKGQLDIFGNPTEEIGQQPAAVSGDLADGELTEDTSEIRI 356 Query: 326 ---------SYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIE 376 ++ Y T+ E + + L F FDTET SLD A LVGLSF+ Sbjct: 357 PTSKRTIDNTFHRYHTVDTPELMTSLAHYLSLQDAFCFDTETTSLDTTDAELVGLSFSYL 416 Query: 377 PGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELR 436 G A YIPV D A E + + + E+E K+GQN+KYD +L NYGIE+ Sbjct: 417 AGEAFYIPVPADRQQA------EEIVGYFRAVFENENIEKIGQNIKYDMLVLKNYGIEVH 470 Query: 437 GIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK-GKNQLTFNQIALEEAG 495 G DTML Y+L RH MD LA +L ++ ++ + GK G Q +A+ E Sbjct: 471 GKLSDTMLAHYLLEPDK-RHGMDILAASYLNYEPVSITSLIGKKGGKQGNMRDVAIPEIT 529 Query: 496 RYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNH 555 +YA EDAD+T QLH +L K +F +EMPL VL+ +E GV++D L Sbjct: 530 QYAGEDADITFQLHSIFSRELPKVNAA-KLFNEVEMPLTKVLASMENTGVRLDINALKEM 588 Query: 556 SEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG-IKPLKKTPGGAPSTSEEVL 614 S L L + E + +E AG+ FN+SS KQL +LFEK I+ KKT G +T EE+L Sbjct: 589 SAVLESDLRQTESEIYEAAGQSFNISSPKQLGEVLFEKMKLIEKPKKTKTGQYATGEEIL 648 Query: 615 EELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDP 674 +L ++ + + IL+YR L KLKSTY D LP M++ +TGR+HTSY+QAV ATGRLSST+P Sbjct: 649 SDLEANHLIARKILDYRELQKLKSTYVDALPTMVSSRTGRIHTSYNQAVAATGRLSSTNP 708 Query: 675 NLQNIPVRNEEGRRIRQAFIAPE-DYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDI 733 NLQNIP+R GR IR+AF+ D+ I+SADYSQIELRIMA S D + AF +G+DI Sbjct: 709 NLQNIPIRTPRGREIRKAFVPDSADFQILSADYSQIELRIMAAFSGDASMTEAFNQGRDI 768 Query: 734 HRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFE 793 H TA++VF +PLE VTS+ RR +K +NFG+IYG+SAFGLA++L IPR EA + + YFE Sbjct: 769 HATTASKVFQVPLEEVTSDMRRKSKMVNFGIIYGISAFGLAQRLGIPRGEASEIIRAYFE 828 Query: 794 RYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAA 853 +P V YM++ A+E+ YVET+ GRR YLPDI S N R AER AINAP+QG+AA Sbjct: 829 EFPAVKGYMDKVVNDAREREYVETILGRRRYLPDINSRNQTNRGYAERNAINAPIQGSAA 888 Query: 854 DIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVP 913 D+IK AMI + ++ E+ + RMI+QVHDELVF+ H ++D + +++ +LM N + V Sbjct: 889 DMIKVAMINIHDFMAKEKLKSRMILQVHDELVFDAHYSEIDLLKERVDELMRNAIPMAVR 948 Query: 914 LLVEVGSGENWDQAH 928 + +G G NW +AH Sbjct: 949 METGIGVGANWLEAH 963 >UniRef50_B0SCM1 DNA-directed DNA polymerase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SCM1_LEPBA Length = 942 Score = 981 bits (2536), Expect = 0.0, Method: Composition-based stats. Identities = 390/948 (41%), Positives = 575/948 (60%), Gaps = 34/948 (3%) Query: 7 NPLILVDGSSYLYRAYHAF--PPLTNSA-GEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 L+++DG + +RAY AF LTNS G P+GA++G ML L+ TH A FD Sbjct: 3 GRLLIIDGHALAFRAYFAFAASNLTNSKTGLPSGAIFGFWRMLFKLLQDEHVTHIAFTFD 62 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 + R++L+E YK+HR PMP+DL+ QI+ ++ M++A+ P+ ++G+EADD+IG+L + Sbjct: 63 PGTRLERNDLYEEYKAHRKPMPEDLKPQIQKIYEMLQALEFPMYKINGIEADDIIGSLCK 122 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPELIIDF 179 + K ++I + DKD+ Q++ NI ++ + P+ V G+ E + D+ Sbjct: 123 KFGKDFEEIVILSSDKDLYQVLDKNIHMLRGKRGVSEFEKIDPKWVKTNIGITKEQVTDY 182 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 +AL+GD+SDNIPGV G+GEK A L+Q G L+T+Y + +K+ K++ KL + Sbjct: 183 MALLGDASDNIPGVKGIGEKGAAKLIQEFGDLETIYKKIDKVKN------KSLIDKLIAD 236 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 KE A+LS +LATI T+++L++ L++ + + FK + D+ + Sbjct: 237 KENAFLSRKLATIVTNLKLDIKKSDLKLPNYYDPKKVQYFKDEGYNVLHRDLAKQAGIPI 296 Query: 300 KGAKPAAKPQETSV------------------ADEAPEVTATVISYDNYVTILDEETLKA 341 A + ETS + +V++ +Y I + LK Sbjct: 297 VSDGDAKEESETSKKTTKGKKESNTEASADGSKKGKTDAATSVVAKKSYKRIQSIDELKK 356 Query: 342 WIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQIS-RER 400 ++KL + DTET S D + A L+G+SF+ EPGVA YI +H + E Sbjct: 357 IVSKLNSKKPISIDTETTSQDPMMAELLGISFSEEPGVAYYIAFSHSESIYSHLLPSAEE 416 Query: 401 ALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDS 460 +L++LKP+LED K+GQN+KYD +L NYGIEL+GI FDTML SY+LN RH+MD Sbjct: 417 SLKILKPMLEDSNWKKIGQNIKYDLLVLKNYGIELKGIYFDTMLASYLLNPGERRHNMDD 476 Query: 461 LAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHK 520 +A +L +KTIT+EE+ G GK + I ++ YA EDAD+TLQLH + P + ++ Sbjct: 477 MAVDYLNYKTITYEELVGTGKKKQNLYDIDPDKVSEYACEDADITLQLHNVLSPKMDENI 536 Query: 521 GPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNL 580 +F +EMP++ L+ +E G+ +D + S ++ E EK H AG +FN+ Sbjct: 537 -HKKLFYEMEMPVLLTLADMEFEGIAVDKSYFESLSGTFDTKIKEHEKNIHFYAGRQFNV 595 Query: 581 SSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTY 640 +STK+LQT+LFE + KKT G ST VLE L +P+ +L R +KLKSTY Sbjct: 596 NSTKELQTVLFEDLRLPAEKKTQTGY-STDHSVLESLQGTHPIIDDLLSIRKFSKLKSTY 654 Query: 641 TDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYV 700 TD LPL++NPKT R+HTSY+Q + ATGRLSST+PNLQNIP+++EEGR +R+ FIA + Y Sbjct: 655 TDTLPLLVNPKTKRIHTSYNQTIAATGRLSSTNPNLQNIPIKDEEGRLLRKGFIAKKGYE 714 Query: 701 IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAI 760 I+S DYSQIELRIMAH S D ++ A+ G DIH+ TAA +FG+P + VT + R AK + Sbjct: 715 ILSLDYSQIELRIMAHFSNDPNMIDAYNSGADIHKRTAAGIFGVPEDQVTPDMRNKAKVV 774 Query: 761 NFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDG 820 NF +IYG+++FGL+ L I RKEA+++++ YF Y GV YME K+ GYVETL G Sbjct: 775 NFSVIYGVTSFGLSNNLRISRKEAKEFIEKYFAAYKGVATYMEEIVEFCKQNGYVETLLG 834 Query: 821 RRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQV 880 RR YLPDI SS+ A+R AIN+P+QGT+AD+IK AMI + ++ E R ++++QV Sbjct: 835 RRRYLPDIHSSHKMVSEGAKRVAINSPIQGTSADMIKIAMIQIHEKIKKESFRSKLLLQV 894 Query: 881 HDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 HDELVFEV + + + ME+ +L VP++V+ G NWD+AH Sbjct: 895 HDELVFEVDPKEKKEFFQMAKEEMESAMKLKVPIVVQGKFGGNWDEAH 942 >UniRef50_C5CIW2 DNA polymerase I n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CIW2_KOSOT Length = 896 Score = 980 bits (2533), Expect = 0.0, Method: Composition-based stats. Identities = 366/927 (39%), Positives = 537/927 (57%), Gaps = 42/927 (4%) Query: 7 NPLILVDGSSYLYRAYHAFP-PLTNSAGEPTGAMYGVLNMLRSLIMQY--KPTHAAVVFD 63 N L L DG++ +YRAY A LTNS GEPT A+YG ML I Y + +A FD Sbjct: 3 NRLFLFDGTAIVYRAYFAIDVSLTNSKGEPTNAVYGTARMLSRFIKNYIAEGDYALFAFD 62 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 K T R +LFE YK+ R MPD L AQ++ + +V+ G+ +V+ +EADD+I T Sbjct: 63 RKEATHRHDLFEGYKATRAEMPDALVAQLKYIPDLVEGFGIKFHSVATLEADDIIATAVT 122 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDF 179 + ++I +GDKD+ QLV + ++ ++ +V K+G+PPE I + Sbjct: 123 KYRDKFDEIVIVSGDKDILQLVDEKVKVLRFVSGLTDLEEYDRRKVEEKFGLPPEKIYEL 182 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 L+L GD+SDNIPGVPG+G KTA LL+ G +D +Y K++ + KL Sbjct: 183 LSLCGDTSDNIPGVPGIGIKTALKLLKEYGSIDEIYKNIRKLS-------PGLRKKLMDG 235 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 K+ +S +L + TD +L + E+L + E+L LF K EF + + Sbjct: 236 KKALEMSKKLVRLVTDADLHIELEELRYRGLDKEKLRELFLKLEFASLLREFDL------ 289 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 + + + Y + ++ L L+ + V + D ET Sbjct: 290 ------------------TNLGSDNNEDNGYRPVSSQQELDELFETLKGSDVISIDLETS 331 Query: 360 SLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQ 419 SLD A +VG+S AI+ G YIPV H+ D Q ++ L LK LLED VGQ Sbjct: 332 SLDPHEAKIVGISVAIKDGEGFYIPVNHESSD--WQADEKQVLLRLKELLEDSGTKIVGQ 389 Query: 420 NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 NLK+D IL +GIE FDTM+ +Y+LN + R ++D LA ++L ++T +F E+ K Sbjct: 390 NLKFDYEILEKHGIEPVVPHFDTMIAAYLLNPDSRRFNLDDLALKFLGYRTTSFSELMNK 449 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 + + F ++++EEA +Y+ EDAD+ L+L+ + L + N+F IEM L+PVL+ Sbjct: 450 NQLKDQFEKVSVEEAAKYSVEDADIALRLYRVLSKKLYESD-LDNIFHKIEMELIPVLAE 508 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 +E NGV ++ + L N SEE RL ++ ++ E+AGE FN +S Q+ ILFEK G+ P Sbjct: 509 LELNGVYMNVESLKNLSEEYEKRLGKIREELFELAGEPFNPNSPTQVSKILFEKLGLNPP 568 Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 KKT GA STS VLEEL ++P+ + +L+YR KLKSTY D LP ++NP TGR+H SY Sbjct: 569 KKTKHGAYSTSAAVLEELVNEHPIIQKLLDYRKYQKLKSTYLDTLPTLVNPVTGRIHASY 628 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE-DYVIVSADYSQIELRIMAHLS 718 HQ T TGRLSS++PN+QN+P++ EEG+ IR+ + + D+ I+SADYSQIELR++AH S Sbjct: 629 HQTGTGTGRLSSSNPNMQNLPIKGEEGKEIRKCVVPQKSDWKIISADYSQIELRVLAHFS 688 Query: 719 RDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLN 778 D+ L++AF G+D+H TA+ ++G+ ++ VT E R+ K +NF +IYG+S +GLAR+L Sbjct: 689 EDERLISAFKNGEDVHALTASRLYGVSVKDVTPEMRQVGKMVNFSIIYGISPYGLARRLK 748 Query: 779 IPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAA 838 I A+ + YF YPGV +++ +AKE+GYV TL GR+ +P ++ N + Sbjct: 749 IKTHIAENMISNYFNAYPGVRKFINEVIHEAKEKGYVRTLFGRKREIPHFRTRNKMKIQE 808 Query: 839 AERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAK 898 ER AIN P+QGTAADI+K AMI + ++ E I+QVHDELVFE +VD V Sbjct: 809 GERIAINTPIQGTAADIMKLAMIKIHKMVKEEGLEAFPILQVHDELVFEAPATEVDRVCD 868 Query: 899 QIHQLMENCTRLDVPLLVEVGSGENWD 925 + + M L VPL V+V W Sbjct: 869 ILTRGMSGVVELKVPLEVDVAVNSYWG 895 >UniRef50_UPI0001744922 DNA polymerase I n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744922 Length = 971 Score = 979 bits (2532), Expect = 0.0, Method: Composition-based stats. Identities = 394/986 (39%), Positives = 544/986 (55%), Gaps = 73/986 (7%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHA 58 M Q L L+D + LYRA+ A P+ S G T A++G N L ++ KPTH Sbjct: 1 MPQSQPQRLFLLDSMALLYRAHFALIRKPIFTSDGVNTSALFGYANALLDILQNQKPTHL 60 Query: 59 AVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVI 118 FD T R +F YK+ R MP+DL I ++KAM +P+L V G EADD+I Sbjct: 61 GAAFDTSAPTPRHTMFPAYKAQREEMPEDLSVAIPAAKRLLKAMRIPVLEVDGWEADDII 120 Query: 119 GTLAREAEKA-GRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVP- 172 GTLA AE G + T DKD QLVT N + ILG +EV ++GV Sbjct: 121 GTLAHHAEARGGFETYMVTPDKDFGQLVTENTLIYKPGRQGADTEILGVKEVCERWGVSN 180 Query: 173 PELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTM 232 P +ID L LMGD+SDNIPG+ GVGEKTA L+Q G ++ + ++I G + Sbjct: 181 PGQVIDLLGLMGDASDNIPGIAGVGEKTAAKLIQQFGSVEAMLDRVDEIEG-------KL 233 Query: 233 AAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADV- 291 K++ E+A +S QLATI D L + + L + E L + ++EF + Sbjct: 234 KDKVKAGAEMARISKQLATIMVDAPLTVQLDDLALLGFDEEALKSILVEFEFNALGRRLF 293 Query: 292 ----EAGKWLQAKGAKPAAKPQETSVADEA------------------------------ 317 +AG+ Q G Sbjct: 294 GDDFKAGRGRQLGGGVAPVSAPAPPAKKSKGGDLQGDLFGAGAETIPVAAAGDEGSAEAM 353 Query: 318 ---------PEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANL 368 P + Y + + +AW+ KL F FDTETD LD +SA + Sbjct: 354 ADAAAAPHLPGLKTIRDIPHRYELVKTADERRAWLEKLAGVDAFCFDTETDGLDPLSARM 413 Query: 369 VGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGIL 428 +G++F+I P Y + + + L+ +K L KA K+G NLK+D + Sbjct: 414 LGIAFSIAPHEGCYFHIPEERDE------HLAVLKEVKTFLSTSKAEKIGHNLKFDLRVF 467 Query: 429 ANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN---QLT 485 +GIE+ G FDTML ++ RH MD L+ER+L + ++ + G+ K Q + Sbjct: 468 LAHGIEVAGPFFDTMLVHALVEPDQ-RHGMDYLSERYLGYSPVSITTLIGEKKGATPQKS 526 Query: 486 FNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGV 545 ++ LE YAAEDADVTLQL K+ P+L++ G + VF IE PL+PVL+ +E GV Sbjct: 527 MAEVPLEPLAEYAAEDADVTLQLSQKLRPELERL-GLMKVFYEIEAPLLPVLAHMEHEGV 585 Query: 546 KIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG-IKPLKKTPG 604 K+D L +EL + L ++ FNL+S KQL +LF+ ++ KKT Sbjct: 586 KVDVPTLEEFGQELLSQANVLRERIQGYVDWPFNLNSPKQLGEVLFDHLKLMEKPKKTAT 645 Query: 605 GAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVT 664 G T+E+ L L +P+ IL YR KLKSTY D LP +NP T RVHT++HQ + Sbjct: 646 GQYQTNEQTLLTLQGRHPIIDDILAYRECTKLKSTYVDALPAAVNPLTHRVHTTFHQLMA 705 Query: 665 ATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQIELRIMAHLSRDKGL 723 ATGR++STDPNLQNIP+R ++GR IR+AF+ E +V++SADYSQIELR+MA LS D + Sbjct: 706 ATGRMASTDPNLQNIPIRTDQGREIRKAFVPEKEGWVLMSADYSQIELRVMAELSADPAM 765 Query: 724 LTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLN-IPRK 782 + AF EG DIH+ATAA+V+G+ L+ V E RR+AK +NFG+IYG+SAFGL+++L R Sbjct: 766 MEAFQEGHDIHQATAAKVYGVALDEVLPEMRRTAKMVNFGIIYGISAFGLSQRLGNTSRT 825 Query: 783 EAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERA 842 EA + ++ YF++YPGV YME QA+ QGYVETL GRR YL DI SSN R+A ER Sbjct: 826 EAAQIIENYFKQYPGVKRYMEDIVTQARTQGYVETLTGRRRYLRDINSSNMTVRSATERV 885 Query: 843 AINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQ 902 A+NAP+QGTAAD+IK AM+ V L+ + RM++QVHDEL+FEV ++VD V I Q Sbjct: 886 AMNAPIQGTAADMIKLAMVNVARSLREGGFKTRMLLQVHDELLFEVPLEEVDKVKPVIEQ 945 Query: 903 LMENCTRLDVPLLVEVGSGENWDQAH 928 M L VP+LVE G+G+ W +AH Sbjct: 946 GMREALPLKVPVLVEAGTGKTWLEAH 971 >UniRef50_B2IJU1 DNA polymerase I n=25 Tax=cellular organisms RepID=B2IJU1_BEII9 Length = 1043 Score = 976 bits (2524), Expect = 0.0, Method: Composition-based stats. Identities = 429/1017 (42%), Positives = 577/1017 (56%), Gaps = 101/1017 (9%) Query: 7 NPLILVDGSSYLYRAYHA-----FPPLTNSAGEPTGAMYGVLNMLRSLIMQ----YKPTH 57 + + LVDGSS+++RAY S PTGA+ L I + KPTH Sbjct: 33 DRVFLVDGSSFVFRAYFQSIRQDAKYNYRSDRLPTGAVRLFCTKLFQFIREGAADLKPTH 92 Query: 58 AAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDV 117 A++FD +FR E++ YKS+R P+DL Q + A V+A GL + EADD+ Sbjct: 93 LAIIFDKSENSFRKEIYPPYKSNRSEPPEDLIPQFPLMRASVRAFGLQPVEQDRYEADDL 152 Query: 118 IGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----------TILGPEEVVN 167 I T A +A G VLI + DKD+ QL+ P +++ + + +G EEVV Sbjct: 153 IATYATQAHALGAEVLIISADKDLMQLIGPGVSMYDPASGEAGAKGARQERRIGQEEVVA 212 Query: 168 KYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFR 227 +GV P+ +ID AL GDS+DN+PG G+G KTA L+ G LD L +I R Sbjct: 213 YFGVGPDKVIDVQALAGDSTDNVPGARGIGIKTAAQLINDYGDLDNLLKLAREIKQPKRR 272 Query: 228 GAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRW 287 T + + +S +L T+ DV +E+ L + P +L+ K EF Sbjct: 273 EILTEPESV----GLIEISRKLVTLVRDVPVEIPLADLGLHAPEPHKLVAYLKALEFTTL 328 Query: 288 TADV-------------------------EAGKWLQAKGAKPAAKPQETSVADEAPEVT- 321 T V G+ L K E + A+ + EV Sbjct: 329 TKRVAEAYGVDLAAVEPDPAFCGAAGWRGRNGEVLVEAEPKAGEGATEPAGAEASGEVAT 388 Query: 322 -----------------------------------ATVISYDNYVTILDEETLKAWIAKL 346 A + Y TI+ E L A IA Sbjct: 389 RSGPKRNARYGEPVEKAALGSGPGLFASARAAEGRAGTFEHSAYQTIVTLEALDAVIAAA 448 Query: 347 EKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDA----------PDQI 396 +A + A DTET SLD + A+L GLS EPG A Y+PV H + P Q+ Sbjct: 449 YEAGLLAIDTETTSLDPMLADLAGLSLCAEPGKAFYVPVGHTSGEGQDLFEGKGLLPGQL 508 Query: 397 SRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRH 456 LE LKPLLED LK+GQN+KYD +L +G+E+R DT+L SY+L++ H Sbjct: 509 PIGVVLERLKPLLEDPSILKIGQNVKYDWIVLKQHGVEMR-PLDDTLLLSYVLDAGLTDH 567 Query: 457 DMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDL 516 MD L+E+ L HK I F +AG G+ + F ++A+++A YAAEDADVTL+L + P L Sbjct: 568 GMDVLSEKHLGHKPIPFSAVAGSGRTFIGFARVAIDKATEYAAEDADVTLRLWRVLKPRL 627 Query: 517 QKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGE 576 K V+E +E P++ VL+R+ER GV IDP +L S + +A E + +E+AGE Sbjct: 628 PAEK-MTTVYETLERPMIDVLARMERRGVAIDPPLLGRLSSDFAQDMARYEAEIYELAGE 686 Query: 577 EFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALD-YPLPKVILEYRGLAK 635 +FNL S KQL ILF K G+ KKT GA ST+ VLE+LA L IL++R LAK Sbjct: 687 KFNLGSPKQLGDILFGKLGLPGAKKTATGAWSTAAGVLEDLAEQGVDLAARILDWRQLAK 746 Query: 636 LKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA 695 LKSTYTD LP INP +GRVHTSY A T TGRLSS++PNLQNIPVRNE GR+IR+AFIA Sbjct: 747 LKSTYTDALPNYINPSSGRVHTSYALAATTTGRLSSSEPNLQNIPVRNEAGRKIRRAFIA 806 Query: 696 PEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRR 755 P +VSADYSQIELR++AH++ K L AFAE DIH TA+E+FG+P+E + SE RR Sbjct: 807 PPGRKLVSADYSQIELRLLAHIADIKSLKNAFAENLDIHAMTASEMFGVPVEGMPSEIRR 866 Query: 756 SAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYV 815 AKAINFG+IYG+SAFGLA QL IPR+EA Y+ YFER+PG+ YM+ T+ +A+E GYV Sbjct: 867 RAKAINFGIIYGISAFGLANQLAIPREEAAAYIKKYFERFPGIRAYMDDTKKKARENGYV 926 Query: 816 ETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVR 875 ET+ GR+ + P IK+SN + RA ERAAINAP+QG+AADII+RAMI ++A L AE+ + Sbjct: 927 ETIFGRKCHYPRIKASNPSERALNERAAINAPIQGSAADIIRRAMIHMEAALAAEKLSAQ 986 Query: 876 MIMQVHDELVFEVHKDDVDAVAKQIHQLMEN----CTRLDVPLLVEVGSGENWDQAH 928 M++QVHDEL+FEV D+V+A + ++M L VPL V+ + +NWD+AH Sbjct: 987 MLLQVHDELIFEVPDDEVEATIAVVRKIMVEAPLPAVHLSVPLQVDAKAAQNWDEAH 1043 >UniRef50_B3TC83 Putative DNA polymerase family A n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC83_9ZZZZ Length = 891 Score = 976 bits (2523), Expect = 0.0, Method: Composition-based stats. Identities = 367/927 (39%), Positives = 524/927 (56%), Gaps = 41/927 (4%) Query: 4 IPQNP-LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 +P P L L+DG++ +YRAYHA LT G T A+YG + MLR L+ +P A F Sbjct: 1 MPSTPRLFLIDGNNQMYRAYHALHGLTGPDGRSTNAVYGFITMLRKLLSDQQPDLVAAAF 60 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 D KG TFR EL YK+ R PMP+DL Q+ +H A+G+P++ +G EADDVIGTLA Sbjct: 61 DLKGPTFRHELAADYKATRRPMPEDLVEQVSWVHEACAALGVPVVTHAGFEADDVIGTLA 120 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMT-NTILGPEEVVNKYGVPPELIIDFLA 181 +A AG V++ TGDKD QLV I + N V+ K+GV P+ ++D LA Sbjct: 121 TQAVAAGLEVVVVTGDKDFFQLVGDRIRVFNPRDEGAWYDDAGVLEKFGVRPDQVVDVLA 180 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGD+SDN+ GVPG+GEK A+ LL G LD L +++ K L ++ + Sbjct: 181 LMGDASDNVKGVPGIGEKGARELLADFGSLDWLLDHADELP------KKKYRTALTEHAD 234 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 A S +L + TDV + E+ + LF + FK ++ Sbjct: 235 NARRSRELVRLVTDVPVPYEPERYRYRGADRTRCFTLFSELGFKSLVSEFA--------- 285 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 TA + D Y + D L+A A L ++ T S Sbjct: 286 ------------------PTADSVDTD-YRMVTDVAELEALAAALRESGRCGLHVLTVSG 326 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 +VGL+F+ A+Y+P+A D LD + L P+LED + K+G +L Sbjct: 327 PPTRGGVVGLAFSTAARSASYVPLAQDGLDLTGSLDGGTVFGTLGPMLEDPQVRKIGHDL 386 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 K D LA + I LRG+ DTM+ SY+L++ ++++A ++ +T + + GKG Sbjct: 387 KRDMLWLAAHEIRLRGLELDTMIASYLLDATRTTPTVETVALEHAGYQALTADTVRGKGA 446 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 F+++ + YA E AD+ LQ + L + + ++ +E PL+PVL+ IE Sbjct: 447 KAPDFDRLPPDGVLAYACERADLPLQAAEPLRARLDQER-LAELYRELEQPLIPVLADIE 505 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 G+++ L S + L+EL+ + + +AGEEFN++S +QL ILFEK + KK Sbjct: 506 TAGIQVATDALAVQSRRMDADLSELQSQIYTLAGEEFNINSPRQLSAILFEKLALPTRKK 565 Query: 602 T-PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 T A ST+ +VLEELA + LP++++E+R + KLK TY D LP ++ P TGRVHTS++ Sbjct: 566 TGKTRAASTAADVLEELAQHHALPRLVIEWRAVQKLKGTYVDALPQLVRPDTGRVHTSFN 625 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRD 720 QAV ATGRLSS+DPNLQNIP+R GR IR+AF+A + +V++SADYSQIELR++AHLS D Sbjct: 626 QAVAATGRLSSSDPNLQNIPIRTPLGREIRRAFVARDGHVLISADYSQIELRVLAHLSAD 685 Query: 721 KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 L AF +DIH TA VFG E RR AK IN+ L+YG +AF L+R + + Sbjct: 686 TALTQAFIRNEDIHDKTALHVFGPDSGLDAHELRRRAKIINYALLYGKTAFTLSRDIGVT 745 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 + AQ ++D YFE YP V +++ +A+E G V T+ GRR +P++++ NG RAAAE Sbjct: 746 PQAAQAFIDAYFEGYPAVRGFLDGVIDEARESGEVRTMFGRRRLVPELRNRNGQIRAAAE 805 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 R +N P+QGTAADI+KRAMI + L P MI+ VHDEL+ E +D+ D+VA + Sbjct: 806 RVTVNMPIQGTAADILKRAMIDLAGALP---PSAPMILTVHDELLIEPPRDEADSVADLV 862 Query: 901 HQLMENCTRLDVPLLVEVGSGENWDQA 927 ME L VPL V+VG GENW A Sbjct: 863 RDRMERAADLTVPLRVDVGIGENWMAA 889 >UniRef50_C1A3H5 DNA polymerase I n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A3H5_GEMAT Length = 984 Score = 975 bits (2522), Expect = 0.0, Method: Composition-based stats. Identities = 391/988 (39%), Positives = 556/988 (56%), Gaps = 71/988 (7%) Query: 2 VQIPQNP-LILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHA 58 V P P L L+DG + +YRA+ A PL+ S GE T +G+ + L+ L+ ++P Sbjct: 4 VTRPTAPRLFLIDGYALIYRAFFALLQRPLSTSRGENTSIAWGIASFLKRLLNTHQPELL 63 Query: 59 AVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIE----PLHAMVKAMGLPLLAVSGVEA 114 A V D+ TFRDEL+ YK+ R + DDL+A + + ++ A +P+L+ G EA Sbjct: 64 AWVHDSGA-TFRDELYPDYKATREKLTDDLQADFDQGLQRVLQLLAAYDIPVLSAPGFEA 122 Query: 115 DDVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN-------TILGPEEVVN 167 DDVIGT+A +AG V++ +GDKD QLV P + L+N + +G E + Sbjct: 123 DDVIGTMAARGVEAGYNVVVVSGDKDFQQLVRPGVWLLNPGRGGPASVDESWVGVENGSD 182 Query: 168 KYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFR 227 + GVPPE +ID+LA++GD+SDN+PGV G+GEK A L+ G L+ + A E I Sbjct: 183 RLGVPPERVIDYLAIVGDTSDNVPGVKGIGEKGAIELITQYGPLENILANVENI------ 236 Query: 228 GAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRW 287 K L+Q + A LS QL TI DV + E+L V QP + L L+ + EF Sbjct: 237 TKKRPREALQQYADSARLSKQLVTIHCDVPVPFESEKLTVGQPNTDALRALYLELEFTSL 296 Query: 288 TADVEAGKWLQAKGAKPAAKP------------QETSVADEAPEVTATVISYDNYVTILD 335 DV + A + + A E V++ YVT+ Sbjct: 297 LKDVGGAVPVATSSGTGATSTAADVAPALPVPGRPAAPAVTLGESGVPVLADARYVTVDT 356 Query: 336 EETLKAWIAKLEKAPVFAFDTET-------DSLDNISANLVGLSFAIEPGVAAYIPVAHD 388 E L + ++ + P A DTET +D + + LVGLS A+ PG A Y+P AH Sbjct: 357 VEALATLLTRVREVPYIAIDTETVIEPGAPFDVDALRSRLVGLSIAVAPGEAYYLPFAHR 416 Query: 389 YLDAPDQIS----------------------------RERALELLKPLLEDEKALKVGQN 420 D ++ A L+ +LED K+ QN Sbjct: 417 RDDGSGNLALLAGDTGTGIVGRRINAGAPEPVNLPPFDSDACAPLRAMLEDPSVTKIAQN 476 Query: 421 LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG 480 KYD +L + G+ + G+ FDTML SY+L+ H +D LA L H ++ + GKG Sbjct: 477 AKYDLLVLRSSGVRVAGVGFDTMLASYVLDPGRRSHGLDLLALEQLGHTMTAYDTLVGKG 536 Query: 481 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI 540 K QL F+ ++ A Y+ ED D+T++L K+ P L +H L++F+ IE+PLV VL+ + Sbjct: 537 KTQLPFDVAPVDTARDYSCEDVDITMRLRAKLEPMLAEH-ALLSLFQEIEVPLVSVLAEM 595 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK 600 E G+ ID + +E+ + AGEEFN++S +L+ ILFEK G+ K Sbjct: 596 EWEGIAIDLDWFASLKARFAAERGRVEQAIYAEAGEEFNINSNPKLRAILFEKLGLPVKK 655 Query: 601 KTPGGAPSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 KT G PST VL+ELA + + LP +++EYR + KL+ TY D LP +++P+ R+HTSY Sbjct: 656 KTATG-PSTDASVLQELAEEGHVLPTLLMEYREIFKLEGTYIDALPRLVHPRDRRLHTSY 714 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSR 719 Q V+ATGRLSS DPNLQNIP+R E GR IR+ F+ E + ++SADYSQIELR++AHLS Sbjct: 715 SQTVSATGRLSSHDPNLQNIPIRRELGRDIRRGFVPREGWRLLSADYSQIELRVLAHLSA 774 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 D ++AF G DIHR TAA +FG+PLE VTSE R AK INF IYG A L+RQL I Sbjct: 775 DPAFVSAFKAGGDIHRQTAAIIFGVPLEDVTSEMRARAKTINFATIYGQGAHALSRQLRI 834 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 EA+ +++ YFER+ GV ++++ A+ +GYVETL RR Y+P++K N RA Sbjct: 835 TNAEAKAFIETYFERFAGVRGFLDQCVVDARARGYVETLFKRRRYIPELKERNFNIRAFG 894 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 ER A NAP+QG+AAD+IK AMI V + AE RM++QVHDELVFE+ ++ D ++ Sbjct: 895 ERVAQNAPIQGSAADLIKIAMINVRNAIDAEGLASRMLLQVHDELVFELPVEEADTLSAL 954 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWDQA 927 + + ME L+VPLLVE+G G +W A Sbjct: 955 VKREMEGAAVLNVPLLVEMGLGTDWVSA 982 >UniRef50_D1CFH6 DNA polymerase I n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFH6_THET1 Length = 930 Score = 974 bits (2518), Expect = 0.0, Method: Composition-based stats. Identities = 373/942 (39%), Positives = 550/942 (58%), Gaps = 43/942 (4%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAFP-PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAA 59 M + ++L+D S +YRAYHA P L S GE T A+YG NML +I + P A Sbjct: 1 MNEGCAVKVVLIDAYSLIYRAYHALPSDLATSKGEKTNAIYGFCNMLVQVINRENPDSIA 60 Query: 60 VVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIG 119 V FD GK FR + F YK+ R PMPDDL+AQI + ++ A +P+ V G EADDVIG Sbjct: 61 VAFDV-GKAFRHDEFVEYKAQRAPMPDDLQAQIGRVRQVIAAFDIPVYEVPGYEADDVIG 119 Query: 120 TLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI-----LGPEEVVNKYGVPPE 174 +LA++ G V+I TGDKD QLV+ +++++ P+ V +YG P Sbjct: 120 SLAKKLSSQGHQVVIVTGDKDFLQLVSDSVSVVLPARGRFSEVQVYTPDLVRLQYGFDPR 179 Query: 175 LIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAA 234 I+DF ALMGD+SDNIPGVPGVGEKTA++L+Q G L + + I R A Sbjct: 180 YIVDFKALMGDASDNIPGVPGVGEKTARSLIQTFGSLQNILENVDSIKPERIRNA----- 234 Query: 235 KLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAG 294 +++++ + +LATI TD+++++ P +++ +F++ EF+ + Sbjct: 235 -IKEHQSQLIQNLRLATIVTDIDVDIEPVISHAWAPDMQKVNEIFRELEFRSLMYRLPKY 293 Query: 295 KWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAF 354 Q ++ A E + Y + D+E+L+ + +L AF Sbjct: 294 FEPQNTSSEKVASV----------ERNEQPQIQEKYEIVSDQESLRRLVRELLAKEYIAF 343 Query: 355 DTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKA 414 DTET + + ++LVG+SF+ + G+A Y+P+ D + L+ L PLLE Sbjct: 344 DTETSGKNVMESDLVGVSFSPKAGIAYYVPINGFSDDGTKDL-----LDELSPLLEGGP- 397 Query: 415 LKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFE 474 K+ N K+D L +GI + + FDT + +++LN + LA L + T + Sbjct: 398 KKIAHNAKFDYMALYKHGIRVSPLYFDTSIAAFLLN--ETSVGLKDLAATRLGIQMTTID 455 Query: 475 EIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLV 534 + GKGKNQ T +++++E RYA DAD+T +L + ++ + + ++F +EMPLV Sbjct: 456 SLIGKGKNQKTMLEVSVDECARYACADADMTFRLFTMLEKEIVE-RKLQDLFYTLEMPLV 514 Query: 535 PVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQ 594 PVL+ +E GV ID L + S +L ++ ++E + +EIAG EFNL S +QL LF+ Sbjct: 515 PVLADMEMTGVAIDADALKSLSTKLYEQIRDIESQIYEIAGYEFNLKSPQQLSKFLFQDL 574 Query: 595 GIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGR 654 G+K ++KT G ST LE L+ +P+ +IL YR L KLK TY D LPLM++ TGR Sbjct: 575 GLKGIRKTSKGY-STDAATLEALSGQHPVIDLILSYRQLTKLKDTYVDALPLMVSRSTGR 633 Query: 655 VHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA----------PEDYVIVSA 704 +HT++ Q TGRL+S+DPNLQNIP+R+ G+ +R+AF+A E V++SA Sbjct: 634 LHTNFSQTSAVTGRLASSDPNLQNIPIRSSLGKEVRKAFVAGSPEKNNAIFDEPSVLLSA 693 Query: 705 DYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGL 764 DYSQIELR++AH++ + L AF+ DIH TA+ +FG+P+E+V RR K INFG+ Sbjct: 694 DYSQIELRVLAHVTDEPKLKEAFSRDIDIHALTASRLFGVPIESVDDNMRRMGKTINFGI 753 Query: 765 IYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLY 824 IYGMS F LAR + ++EA ++ Y +++P V Y E+ +A+++GYVET GRR Y Sbjct: 754 IYGMSGFRLARDTGLEQREANLFVKRYMDQFPRVKAYFEQLIKEAEKKGYVETPLGRRRY 813 Query: 825 LPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDEL 884 LPDI SSN RR AA RAAIN P+QG AADIIK+AMI V + L+ E + +MI+QVHDEL Sbjct: 814 LPDITSSNPQRREAARRAAINMPIQGMAADIIKQAMIDVHSALEREGIKAKMILQVHDEL 873 Query: 885 VFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 +FEV + +D A+ I + M L VPL+VE G NW + Sbjct: 874 LFEVAESQLDRAAEVIVREMSTAFDLSVPLVVEAEYGPNWGE 915 >UniRef50_B0VJ17 DNA polymerase I n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VJ17_9BACT Length = 918 Score = 971 bits (2511), Expect = 0.0, Method: Composition-based stats. Identities = 373/931 (40%), Positives = 550/931 (59%), Gaps = 26/931 (2%) Query: 8 PLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 L L+DG++ LYRA+ AF PL NS G T A++GV+N ++ + + A+ FD K Sbjct: 4 KLYLIDGTALLYRAHFAFIKNPLINSKGIHTSAIFGVINSFLHILENTQAAYVAISFDRK 63 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 TFR L+E YK+ RPPMPD+L AQIEP+ + +GL + + G EADD++GTLA+ Sbjct: 64 APTFRHNLYEAYKAQRPPMPDELTAQIEPVKRFFELIGLKEIGLDGYEADDILGTLAKLY 123 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185 + ++ T DKD QLV +++ M + +L + V KYGV PE ID+LAL+GD Sbjct: 124 KDQ-FQIVFLTSDKDYCQLVDERSVMLDPMKDIVLDRDAVYAKYGVYPEQFIDYLALVGD 182 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 SDNIPGV +G KTA LL LD +YA +K+ + L +NKE AYL Sbjct: 183 PSDNIPGVSSIGPKTAAMLLSEYQTLDNIYANLDKLK-------PRLQEVLRENKENAYL 235 Query: 246 SYQLATIKTDVELEL-TCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304 S QLA I TDV + E L + + L ++YE +E + Sbjct: 236 SKQLAKIDTDVPIPKPDLEHLTFWAKDLRKAIPLLEEYEINSIKRKIELKYPETNTTKQQ 295 Query: 305 AAKPQETSVADEAP--EVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 + E P E T +++ + +L++A + DTETDS + Sbjct: 296 TEYQDDIFKEKEKPQEETAETEEKMPFSAVLVNTLNFVTLLKELKEAKQISLDTETDSPE 355 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 + ANLVG+SF ++ A Y+P+ H + L L+ L+ + L +G NLK Sbjct: 356 PMRANLVGISFCMDEKKAYYLPLGHQLAVN---LPLPEVLRHLEDALKGK--LLLGHNLK 410 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 +D +LA G+EL FDTML +YIL+ + +++ A L +K I ++ GKGKN Sbjct: 411 FDLIVLARNGLELDNPLFDTMLAAYILDPGTLNYSLETCALNELNYKMIPISDLIGKGKN 470 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 Q TF+ + E+A Y+AEDA +L+ + N+F+ IE+PL+ VL ++E Sbjct: 471 QSTFDLVEPEKACIYSAEDAWAVYKLYPVYRRKVD-FSVMANLFDTIELPLIKVLQQMEM 529 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 NGV ID VL S ++ L L L K + AG EFN++ST+QL +LFE++ + +KT Sbjct: 530 NGVAIDCSVLSEISHQINLELKTLTDKIYAFAGYEFNINSTQQLAKLLFEEKKLPYGRKT 589 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST VLEELA+DY + +I++YR L+KL+STY LP MINP+TGR+H+S++Q Sbjct: 590 KTGY-STDNSVLEELAIDYEIAGIIIQYRQLSKLQSTYVSALPKMINPQTGRIHSSFNQT 648 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE-DYVIVSADYSQIELRIMAHLSRDK 721 VT+TGRLSS++PNLQNIPVR E GR IR+AF A + +++I+ ADYSQIELR++A +S D+ Sbjct: 649 VTSTGRLSSSNPNLQNIPVRTEIGREIRKAFCAKDAEHLILDADYSQIELRLLALMSEDE 708 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 L+ AF + DIH+ AA++F + +E VT +QRR+AK INFG++YGM L+R+L I Sbjct: 709 VLIEAFKQDLDIHKRMAAKIFNVDIEKVTPDQRRAAKTINFGILYGMGQRKLSRELGISL 768 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 EA+ +D Y+ ++P + ++ + +A++Q Y ETL GRRLYLP+I S N ++ AER Sbjct: 769 NEAKDIIDGYYAQFPSIRNFINQCVNKARQQHYAETLFGRRLYLPNIDSKNQGLKSEAER 828 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 A+N P+QGTAAD+IK AM+ + + + ++MI+QVHDEL+FEV ++ ++ + Sbjct: 829 IAVNMPIQGTAADLIKIAMLNIHKQIDKRE-DIKMILQVHDELLFEVQQEALEETKNIVK 887 Query: 902 QLMENCTRL----DVPLLVEVGSGENWDQAH 928 ME+ V L +VG G+NW +AH Sbjct: 888 TCMESALPPKYAEKVHLKTDVGVGKNWFEAH 918 >UniRef50_D0RQG2 DNA polymerase I n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RQG2_9RICK Length = 925 Score = 969 bits (2505), Expect = 0.0, Method: Composition-based stats. Identities = 383/942 (40%), Positives = 575/942 (61%), Gaps = 37/942 (3%) Query: 5 PQNPLILVDGSSYLYRAYHAFPPLTN-SAGEPTGAMYGVLNMLRSLIMQYK-------PT 56 + L L+DGS Y++RAY+A PPLT S G P GA+ G NML S + + K PT Sbjct: 3 KEKHLFLIDGSGYIFRAYYALPPLTRKSDGLPVGAVSGFCNMLYSFLEKAKAGNTMDTPT 62 Query: 57 HAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADD 116 H AV+FD+ K FR+++++ YK +R P+DL Q + + VKA LP + + EADD Sbjct: 63 HLAVIFDSARKNFRNDIYKDYKGNRSDAPEDLIPQFDYIRKAVKAFNLPSIEMLNYEADD 122 Query: 117 VIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELI 176 +I T +A+K + I + DKD+ QLV +++TM + +G EEV K+GVPPE + Sbjct: 123 LIATYKEKAKKKKIKITIVSSDKDLMQLVDKETFMLDTMKDRHIGIEEVKEKFGVPPEKV 182 Query: 177 IDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKL 236 ID +L GDS DNIPGVPG+G KTA L+ G LD L + + I L Sbjct: 183 IDVQSLAGDSVDNIPGVPGIGVKTAAELINQFGSLDELLKKADTIK------QPKRRQTL 236 Query: 237 EQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEA--G 294 NK+ A +S +L T+K DV ++ E ++ E++ + EF + +E G Sbjct: 237 LDNKKNALISRELVTLKCDVPIKEEIEDFILKPLDKEKIFNFLDEMEFSKIKKSIEQTYG 296 Query: 295 KWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAF 354 K K A PQ+T+ E + I + + L+ + + + FA Sbjct: 297 KSSDTLTKKETATPQKTNNKKE-----------SGFHIIYEAQELEDLLKQADNQGYFAI 345 Query: 355 DTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPD---QISRERALELLKPLLED 411 DTET+SL++ A+LVG+S AI A Y+PV H P+ QI + +++LKP LED Sbjct: 346 DTETNSLNSQKADLVGISLAINENEAYYVPVGHKNKQDPNLKKQIKIKELVKVLKPYLED 405 Query: 412 EKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTI 471 E KVGQN+KYD I YGIEL+ DTML SY L++ RH++D LA+ L H I Sbjct: 406 ETVKKVGQNIKYDLKIFLKYGIELKSFE-DTMLLSYSLDAGVNRHNLDLLAKTHLDHDNI 464 Query: 472 TFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEM 531 F+++ G GK+++TF+++ ++ A RYA EDADVTL+L+ + K K ++E +E+ Sbjct: 465 KFKDVVGTGKSEVTFDEVLIDNAYRYACEDADVTLKLYNLFKDRIVKEK-CFQIYETLEI 523 Query: 532 PLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILF 591 PLV VL+R+E NG+KID +L S + L LEKK ++++GEEFN++STKQL IL+ Sbjct: 524 PLVDVLARMENNGIKIDQVILKKLSNSFSADLKTLEKKIYKLSGEEFNIASTKQLGDILY 583 Query: 592 EKQGIKPLKKTPGGAPSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINP 650 EK I KKT G +T+ VLE+LA PK++LE+R +KLK+TYTD LP I+ Sbjct: 584 EKLKISGTKKTKKGNFATNVNVLEDLASKGNEFPKLVLEWRQKSKLKNTYTDSLPEYIDK 643 Query: 651 KTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIE 710 T R+HTS+ A T+TGRL+S DPNLQNIP++++EG+ IR AF++ + I+SADYSQIE Sbjct: 644 NTKRIHTSFLLAATSTGRLASADPNLQNIPIKSKEGKLIRSAFVSEKGSSIISADYSQIE 703 Query: 711 LRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSA 770 +R++AH++ K L AF +DIH TA+++F ++ + + RR AKAINFG+IYG+S+ Sbjct: 704 MRVLAHVADVKELKKAFKNNEDIHNITASQIFECDIKKINEDMRRKAKAINFGIIYGISS 763 Query: 771 FGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKS 830 +GLA+Q+++ EA++++ YF+++P + +YM+ T ++ G+V+T+ R+ + P+I Sbjct: 764 YGLAKQISVSNPEAEQFLFSYFKKFPEIRDYMQETLEFCRKNGFVQTMFNRKCHFPNIND 823 Query: 831 SNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHK 890 N ++ ERAAINAP+QG AADII+ AMI +D + +++ + R+++Q+HDEL+ E Sbjct: 824 KNHTLKSFQERAAINAPIQGAAADIIRFAMINIDKKILSKKIKSRLLVQIHDELLLETKD 883 Query: 891 DDVDAVAKQIHQLMENC----TRLDVPLLVEVGSGENWDQAH 928 D+ ++I MEN VPL+V+ S +NW+ AH Sbjct: 884 MDLKKEIQKIKNEMENAIDGDYNFSVPLIVDANSAKNWNDAH 925 >UniRef50_O34996 DNA polymerase I n=38 Tax=Bacteria RepID=DPO1_BACSU Length = 880 Score = 968 bits (2502), Expect = 0.0, Method: Composition-based stats. Identities = 368/927 (39%), Positives = 532/927 (57%), Gaps = 56/927 (6%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 + L+LVDG+S YRA+ A P L+N G T A+YG +L ++ KPTH V FDA Sbjct: 4 RKKLVLVDGNSLAYRAFFALPLLSNDKGVHTNAVYGFAMILMKMLEDEKPTHMLVAFDAG 63 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 TFR F+ YK R P +L Q+ + ++ A + + EADD+IGTLA+ A Sbjct: 64 KTTFRHGTFKEYKGGRQKTPPELSEQMPFIRELLDAYQISRYELEQYEADDIIGTLAKSA 123 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLA 181 EK G V + +GDKD+ QL T T+ T PE V KYG+ PE IID Sbjct: 124 EKDGFEVKVFSGDKDLTQLATDKTTVAITRKGITDVEFYTPEHVKEKYGLTPEQIIDMKG 183 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGDSSDNIPGVPGVGEKTA LL+ ++ L ++++G K + KLE+ K+ Sbjct: 184 LMGDSSDNIPGVPGVGEKTAIKLLKQFDSVEKLLESIDEVSG------KKLKEKLEEFKD 237 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 A +S +LATI TD +E++ LE Q E+++ +FK F + Sbjct: 238 QALMSKELATIMTDAPIEVSVSGLEYQGFNREQVIAIFKDLGFNTLLERL---------- 287 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 + +A+ ++ ++ T T ++ D V+ AF E Sbjct: 288 GEDSAEAEQDQSLEDINVKTVTDVTSDILVS------------------PSAFVVEQIGD 329 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 + ++G S E G A +IP E+ K +E+++ K + Sbjct: 330 NYHEEPILGFSIVNETG-AYFIPK-----------DIAVESEVFKEWVENDEQKKWVFDS 377 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 K L GIEL+G FDT+L +YI+N D+ S+A+ + H + E + GKG Sbjct: 378 KRAVVALRWQGIELKGAEFDTLLAAYIINPGNSYDDVASVAKDYGLHIVSSDESVYGKGA 437 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 + ++ + + A L K+ +L ++ L +FE +EMPL +L +E Sbjct: 438 KRAVPSE---DVLSEHLGRKALAIQSLREKLVQEL-ENNDQLELFEELEMPLALILGEME 493 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 GVK+D L EEL +L E E+K HEIAGE FN++S KQL ILFEK G+ +KK Sbjct: 494 STGVKVDVDRLKRMGEELGAKLKEYEEKIHEIAGEPFNINSPKQLGVILFEKIGLPVVKK 553 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 T G STS +VLE+LA + + IL+YR + KL+STY + L + P + +VHT ++Q Sbjct: 554 TKTGY-STSADVLEKLADKHDIVDYILQYRQIGKLQSTYIEGLLKVTRPDSHKVHTRFNQ 612 Query: 662 AVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE-DYVIVSADYSQIELRIMAHLSRD 720 A+T TGRLSSTDPNLQNIP+R EEGR+IRQAF+ E D++I +ADYSQIELR++AH+S+D Sbjct: 613 ALTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSEKDWLIFAADYSQIELRVLAHISKD 672 Query: 721 KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 + L+ AF DIH TA +VF + + VTS RR AKA+NFG++YG+S +GL++ L I Sbjct: 673 ENLIEAFTNDMDIHTKTAMDVFHVAKDEVTSAMRRQAKAVNFGIVYGISDYGLSQNLGIT 732 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 RKEA ++D Y E + GV YME + +AK++GYV TL RR Y+P++ S N R+ AE Sbjct: 733 RKEAGAFIDRYLESFQGVKAYMEDSVQEAKQKGYVTTLMHRRRYIPELTSRNFNIRSFAE 792 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 R A+N P+QG+AADIIK+AMI + A L+ +Q + R+++QVHDEL+FE K++++ + K + Sbjct: 793 RTAMNTPIQGSAADIIKKAMIDMAAKLKEKQLKARLLLQVHDELIFEAPKEEIEILEKLV 852 Query: 901 HQLMENCTRLDVPLLVEVGSGENWDQA 927 ++ME+ LDVPL V+ SG +W A Sbjct: 853 PEVMEHALALDVPLKVDFASGPSWYDA 879 >UniRef50_O08307 DNA polymerase I n=4 Tax=Chloroflexi (class) RepID=DPO1_CHLAA Length = 942 Score = 965 bits (2494), Expect = 0.0, Method: Composition-based stats. Identities = 373/945 (39%), Positives = 550/945 (58%), Gaps = 42/945 (4%) Query: 9 LILVDGSSYLYRAYHAFPP--LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L+LVDG + YRA+ A L +S GEPT A++G +L + + +Y+P +AAV FD G Sbjct: 6 LVLVDGHALAYRAFFALRESGLRSSRGEPTYAVFGFAQILLTALAEYRPDYAAVAFDV-G 64 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 +TFRD+L+ YK+ R P++ Q E + +V+A+ +P+ G EADDVIGTLAR+A Sbjct: 65 RTFRDDLYAEYKAGRAETPEEFYPQFERIKQLVQALNIPIYTAEGYEADDVIGTLARQAT 124 Query: 127 KAGRPVLISTGDKDMAQLVTPNITL-----INTMTNTI-LGPEEVVNKY-GVPPELIIDF 179 + G +I TGD D+ QLV ++ + T+ E+V +Y G+ P+ + D Sbjct: 125 ERGVDTIILTGDSDVLQLVNDHVRVALANPYGGKTSVTLYDLEQVRKRYDGLEPDQLADL 184 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 L GD+SDNIPGV G+GEK A ALL+ LD L + + K L + Sbjct: 185 RGLKGDTSDNIPGVRGIGEKGAIALLKQFRSLDALLEQID-------AAPKRYQTLLREQ 237 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEF-------KRWTADVE 292 E A S QLATI TDV ++L E + ++ LF++ EF K+ + V+ Sbjct: 238 AEAARFSRQLATIVTDVPVQLDLEAARIGVYDRSAVMALFQELEFGVSSNLIKKLPSVVQ 297 Query: 293 AGKWLQAKGAKPAA----KPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEK 348 A + PAA P + S+ E + D L +++L Sbjct: 298 APTLAELPADLPAAPLTTAPTQLSLFAGESEPAQPTAEPPPVTIVRDATALADLVSRLRN 357 Query: 349 APVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPL 408 AP FAFDTE SL ++++LVG+S AI P YIPV H + Q+ + L P Sbjct: 358 APAFAFDTECTSLQPVASDLVGISIAIAPDTVCYIPVGH---QSETQVPCGEVVTALAPF 414 Query: 409 LEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLA--ERWL 466 + + K N K+D +LA GI++ G+AFDTM+ + +L R + LA E L Sbjct: 415 FANPQQPKFAHNAKFDMEVLAGAGIKVSGLAFDTMIAAAML---GKRQGLKDLAFYELKL 471 Query: 467 KHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVF 526 T E++ G+G Q++F ++ +E+A YAA DA TL+L ++ L+ +++ Sbjct: 472 PEPPTTIEDLIGRGNKQISFAEVPVEQAAPYAAADALYTLRLTERLQRQLEAEPALHDLY 531 Query: 527 ENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQL 586 +E+PL+ VL+ +E G+++D + L R+A+L ++ ++ AG FN++S +QL Sbjct: 532 YRVELPLIEVLTDMELTGIRLDQEYLRELGRHFAQRIADLVERIYQQAGGPFNINSGQQL 591 Query: 587 QTILFEKQGIKP----LKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTD 642 +LF + GI P L K G S + EVLEEL+ YP+ IL YR L KLKSTY D Sbjct: 592 NDVLFGRLGIDPRAHGLSKLKSGGYSITAEVLEELSQLYPIAADILTYRQLTKLKSTYID 651 Query: 643 KLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIV 702 LP ++NP+TGR+HTSY+Q ATGRLSS +PNLQNIPVR EEGR IR+AF+A + V Sbjct: 652 ALPDLVNPRTGRIHTSYNQLGAATGRLSSNNPNLQNIPVRTEEGREIRRAFVAEPGWRFV 711 Query: 703 SADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINF 762 +ADYSQIELR++AH+S D+ L+ AF +G DIH ATA+ +FG+ V QRR AK + F Sbjct: 712 AADYSQIELRVLAHMSGDENLIAAFQQGLDIHAATASRLFGVEPTAVDKNQRRVAKTVVF 771 Query: 763 GLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRR 822 G+IYG+SAFGLA++L I R A++ +D F ++PG+ Y+++T ++ GYV+TL GRR Sbjct: 772 GVIYGISAFGLAQRLGIERDLARQLIDNLFAQFPGIRRYIDQTLEFGRQHGYVQTLFGRR 831 Query: 823 LYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHD 882 + D+++S R AA AINAP+QGTAAD++K AM+ V L+ + R R+++QVHD Sbjct: 832 RVMEDLRASGARRAAAER-EAINAPIQGTAADLMKMAMVNVHRALREQGLRTRLLLQVHD 890 Query: 883 ELVFEVHKDDVDAVAKQIHQLMENCTR-LDVPLLVEVGSGENWDQ 926 EL+ E +D+V+ A+ + +M + R L VPL V + G NWD+ Sbjct: 891 ELIAEAPEDEVEPAARLLRDVMSSVYRDLVVPLSVNLEVGPNWDE 935 >UniRef50_B4S5F3 DNA polymerase I n=12 Tax=Chlorobiaceae RepID=B4S5F3_PROA2 Length = 950 Score = 964 bits (2493), Expect = 0.0, Method: Composition-based stats. Identities = 383/941 (40%), Positives = 549/941 (58%), Gaps = 33/941 (3%) Query: 2 VQIPQNP-LILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHA 58 + P L L+DG + +YRA+ A + G PTGA +G L L + Y P + Sbjct: 29 TPRTEKPELFLLDGMALVYRAFFALQRADMKTRDGVPTGAAFGFLTTLLKIYETYAPDYL 88 Query: 59 AVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVI 118 AV FD++ KTFR E ++ YK++RP P+DL Q++ + +++A +P+L G EADD+I Sbjct: 89 AVAFDSREKTFRHERYDAYKANRPQPPEDLITQLDFIFRLIEAFNIPILKQPGYEADDLI 148 Query: 119 GTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPE 174 GT ARE E R + I + DKDM QL+ +TL+ G E+ + G+ P+ Sbjct: 149 GTAAREFEPECR-INIVSPDKDMTQLIHDGVTLLKPGKRQNELLRFGAAELKEELGIAPD 207 Query: 175 LIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAA 234 ID L L GDSSDNIPG G+G KTA LL G LD + EK+ R K++ Sbjct: 208 QFIDLLTLTGDSSDNIPGAKGIGPKTASKLLLSYGSLDEISKNLEKL---PPRTRKSLEE 264 Query: 235 KLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEA- 293 L + + L L TIKTD++L+ L+ QP E+L L ++ E + + + Sbjct: 265 FLPERE----LIRDLVTIKTDIDLQTPLASLQCGQPDPEKLFPLLERLELRAIASKIPDL 320 Query: 294 -GKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVF 352 K P P+ A AP +T Y I EE L L F Sbjct: 321 FPAITPPKEIAPDNAPKVKREAHRAPTITEPPEDA-VYTLIDTEEELTTLTETLAGLSSF 379 Query: 353 AFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDE 412 A DTET SL+ A LVG+S +++P A +I +P+ + E+AL +LKP+LE+ Sbjct: 380 ALDTETTSLNTFEAELVGISISVKPQEAVFI------YCSPEGLKPEKALSILKPVLENP 433 Query: 413 KALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTIT 472 K GQNLKYD +L NYGI+L FDTML SY++N H++D LA+R L+++T T Sbjct: 434 AIEKWGQNLKYDILVLKNYGIQLAPTGFDTMLASYVINPEET-HNLDDLAQRHLQYRTTT 492 Query: 473 FEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMP 532 + E+ G GK + Q+ LE YA +DAD+ L+L + L+ ++ + NIE P Sbjct: 493 YSELCGTGKKAVPLRQVPLEALKNYACQDADIALRLQNTLEKQLKDNQELEWLCRNIEFP 552 Query: 533 LVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFE 592 LV VL +E G+ +D K L + ++ A+L+++ + AG FN+ S KQL ILF Sbjct: 553 LVNVLVAMEYRGISLDTKHLEKTATKVASLTADLKERIYATAGSTFNIDSPKQLGEILFT 612 Query: 593 KQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKT 652 + G+ K T G ST+ +VLEELA+ +P+ + ILEYR L KL+STY + LP ++NP T Sbjct: 613 RLGLPAKKTTKTGY-STNVQVLEELAMIHPIAQDILEYRSLQKLRSTYIEALPKILNPAT 671 Query: 653 GRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPED-YVIVSADYSQIEL 711 G++HTS++Q +TATGRLSS++PNLQNIP+R E G+ IR+AFIA + ++SADYSQIEL Sbjct: 672 GKLHTSFNQHITATGRLSSSNPNLQNIPIRTELGKEIRKAFIASTNRNFLLSADYSQIEL 731 Query: 712 RIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAF 771 RI A LS DK L+ AF +DIH ATA +F E VTS+ RR AK +NFG++YG+ + Sbjct: 732 RIAAELSGDKKLIEAFRNQEDIHAATAKAIF--DTEDVTSDMRRKAKEVNFGVLYGIQPY 789 Query: 772 GLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSS 831 GL+ +LNI +KEA+ +D Y +YPG+ E ++ QA E G+V TL GRR Y+ + S Sbjct: 790 GLSMRLNISQKEAKAIIDTYKSKYPGLFEALDALVRQAAENGFVTTLLGRRRYIAALNSR 849 Query: 832 NGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKD 891 NG R AAERAA+N P+QGTAADIIK AM ++ +Q + M++QVHDELVFE +++ Sbjct: 850 NGNIRKAAERAAMNTPVQGTAADIIKYAMCLIENTMQEHKMHSTMLLQVHDELVFETNEE 909 Query: 892 DVDAVAKQIHQLMENCTRL----DVPLLVEVGSGENWDQAH 928 + + + + M+ + VP+ V+ G G+NW AH Sbjct: 910 EHEKLETMVVASMKEAALVCGLKQVPVEVDTGIGKNWLDAH 950 >UniRef50_B2UNN5 DNA polymerase I n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UNN5_AKKM8 Length = 945 Score = 964 bits (2492), Expect = 0.0, Method: Composition-based stats. Identities = 383/969 (39%), Positives = 561/969 (57%), Gaps = 65/969 (6%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHA 58 M P L ++DG + YRA+ AF P+ NS G T A+YG N L ++ +PTH Sbjct: 1 MTDSPSKRLFILDGMALAYRAHFAFFSNPIRNSKGVNTSAVYGFANTLLGILEHERPTHI 60 Query: 59 AVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVI 118 A FD T R +L+ YK++R MP++L Q+ + +++AM +P+L G EADD I Sbjct: 61 AACFDTSAPTARHKLYPAYKANRESMPEELSDQMPLIFRLLEAMNIPILRYEGYEADDTI 120 Query: 119 GTLAREAEK-AGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVP- 172 GTLAR A+ G + + DKD+ QL++ L ++ ++ ++G+ Sbjct: 121 GTLARIADGTEGFQTYMVSQDKDLGQLISSTCFLWKPGKRGNDHEVIDLAKLKEQWGIER 180 Query: 173 PELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTM 232 + ++D LALMGDSSDNIPG+PGVGEKTA+ L+ G ++ L + +K+ G Sbjct: 181 ADQVVDILALMGDSSDNIPGLPGVGEKTAKLLIGEFGSVENLLSNTDKLKG-------KR 233 Query: 233 AAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVE 292 +E+N +A LS QLATI +V L +T +L ++P+ EEL L ++ EF+ A + Sbjct: 234 KQIVEENGAMATLSKQLATIDRNVPLTVTLPELVKREPSPEELQALLQELEFRSMQAKLF 293 Query: 293 AGKWLQAKGA--------KPAAKPQETSVADEAPEVTATVIS------------------ 326 K + + A PA + ++ A+ + V+ + Sbjct: 294 GKKAPEPRKAPLPADDLFAPAPRTEQPLSAEPSAPVSGARQNGSGQMDLFEERHLKTVDD 353 Query: 327 -YDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPV 385 Y+ E + A+LEK + FDTET L+ + NL+G+SF EP A Y+PV Sbjct: 354 FRHEYIIADTPEARSSMAAELEKYDSWCFDTETTGLNPLMDNLLGVSFCAEPHKAWYMPV 413 Query: 386 AHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLE 445 S LE ++PLLE A K+G +LK+D +L GI ++G FDT+L Sbjct: 414 -----------SGPADLEAVRPLLEGP-AEKIGHHLKFDLEVLRANGIHVKGPFFDTLLA 461 Query: 446 SYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFN--QIALEEAGRYAAEDAD 503 ++ +H MD LAE L++ TI ++IA G + + + +E G+Y+AEDAD Sbjct: 462 HALIAPG-MKHGMDVLAENLLQYSTIKLKDIAAPGAKKRELDTSGVPVEVMGKYSAEDAD 520 Query: 504 VTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRL 563 +TLQL + + K G +F +E+PL+PVL+ +E +G+++ P+ L S ++ + Sbjct: 521 ITLQLSAVLKRQV-KESGMEKLFRTVELPLLPVLADMEFSGIRVLPESLEKASVKVGAII 579 Query: 564 AELEKKAHEIAGEEFNLSSTKQLQTILFEKQG-IKPLKKTPGGAPSTSEEVLEELALDYP 622 L ++ E AG NL+S KQL LF + +K KKT G T E+ L LA +P Sbjct: 580 DGLRERIEEAAGHPLNLNSPKQLGDFLFGELELVKKPKKTKTGQFVTDEDTLSALAPQHP 639 Query: 623 LPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVR 682 + IL YR KLKSTY D LP I P+ GR+HT +HQ +TATGRL+S DPNLQNIPVR Sbjct: 640 IIADILAYRENMKLKSTYLDALPKYICPRDGRIHTQFHQMLTATGRLASQDPNLQNIPVR 699 Query: 683 NEEGRRIRQAFI-APEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEV 741 E+GR IR AF+ A E Y ++SADYSQIELRIMA LS D + AF EG+DIH TAA V Sbjct: 700 TEQGRLIRTAFVPASEKYTMLSADYSQIELRIMAALSGDPAMCGAFREGRDIHTETAARV 759 Query: 742 FGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEY 801 +G+P + V + RR+AK +NFG+IYG+SAFGL+++L PR EA ++ YF ++P V + Sbjct: 760 YGIPRDQVDAVMRRAAKTVNFGIIYGISAFGLSQRLGCPRGEAATLIENYFTQFPVVKSF 819 Query: 802 MERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMI 861 ME +A++ GY ETL GRR +P+I S+N ++AAER AIN P+QGTAAD+IK AMI Sbjct: 820 MEDLVHKAEQAGYAETLLGRRRMIPEINSANKTIKSAAERTAINTPIQGTAADMIKIAMI 879 Query: 862 AVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRL--DVPLLVEVG 919 VD L+ R R+I+Q+HDEL+ ++H+D++D + +I + M + L VP+LVE Sbjct: 880 HVDKLLK--GTRSRLILQIHDELLVDLHRDELD-LIPKIEEAMVSALPLPNGVPILVEAR 936 Query: 920 SGENWDQAH 928 +G NW +AH Sbjct: 937 TGGNWLEAH 945 >UniRef50_B8D217 DNA polymerase I n=1 Tax=Halothermothrix orenii H 168 RepID=B8D217_HALOH Length = 870 Score = 963 bits (2490), Expect = 0.0, Method: Composition-based stats. Identities = 359/925 (38%), Positives = 516/925 (55%), Gaps = 71/925 (7%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 + L L+DG S +RA++A P L+ S GE T A++G ML L+ + KP AV FD K Sbjct: 2 KKKLYLLDGQSLAHRAFYALPLLSTSRGEYTNAVFGFTRMLLKLLDEEKPDLIAVAFDKK 61 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 TFR + ++ YK+HR MP++L+ Q+ + ++K+ +P++ + G EADD+IGT+AR+ Sbjct: 62 APTFRHKEYKEYKAHRKKMPEELKPQLSLIKEVLKSFSIPIIEIEGFEADDIIGTMARKG 121 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLA 181 E+ G V+I TGD+D QLVT +++++ T +V +Y + P+ +ID Sbjct: 122 EEEGFEVVIVTGDRDALQLVTEDVSVMYTKRGISDIVRYDLNKVRERYELEPQQLIDMKG 181 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGDSSDNIPGVPG+GEKTA LL+ L+ + +K++G K L++ + Sbjct: 182 LMGDSSDNIPGVPGIGEKTAIKLLKEFSSLEEILDNIDKVSG------KKRKENLQKYAD 235 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 A LS +L IK DV L++ ++ + + + + LF++ EF + + Sbjct: 236 QARLSKRLGEIKVDVPLDVELDECHLGKFHKKNIRELFERLEFASLLNRFKEKTSISID- 294 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDT-ETDS 360 D V LD + L+ K + Sbjct: 295 --------------------------DISVKELDRKGLENICDKARNLGKLGLTLRLNNY 328 Query: 361 LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN 420 + A+ ++ G A+ +LKP+L D K N Sbjct: 329 TTPVRAHASQGIISLGEGNLYIFT------------DINEAISILKPILTDISVKKYILN 376 Query: 421 LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG 480 K L + IEL G+ FD +L Y+L + L ++ L Sbjct: 377 SKECTVFLKKHDIELEGLVFDPLLAYYLLKPSGKLPGLRDLLDQELSLSLPE-------- 428 Query: 481 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI 540 ++E Y D +L M P L+ + + +F +IE+PL+ VL+ + Sbjct: 429 ---------DIKEDNLYLV-FMDNIFKLAEGMVPKLEDME-LIELFNDIEIPLITVLAEL 477 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK 600 E NG+K+D + L + S + L LE K HE+AGE+FN++S KQL ILFEK G+ +K Sbjct: 478 EYNGIKVDAEYLESLSRKWEEELNGLESKIHELAGEKFNINSPKQLGGILFEKLGLPVIK 537 Query: 601 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 KT G ST +VLE+L +P+ +I EYR L KLKSTY D LP MINP TGR+HTS++ Sbjct: 538 KTKTGY-STGAKVLEKLEDKHPIIPLISEYRQLMKLKSTYVDALPPMINPDTGRLHTSFN 596 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQIELRIMAHLSR 719 Q VTATGRLSST+PNLQNIPVR +EGR IR+AFI ED+V+++ADYSQIELR++AH+S Sbjct: 597 QMVTATGRLSSTEPNLQNIPVRTDEGREIRRAFITENEDWVLLAADYSQIELRVLAHISD 656 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 D+GL AF G+DIH TA+EVF + + VT RR AK INFG+ YGMS +GLAR L I Sbjct: 657 DEGLKAAFNTGQDIHTQTASEVFEVEPDEVTPNMRRHAKVINFGIAYGMSPYGLARDLGI 716 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 R+EA Y++ YFER+ GV +YMER +AK +GYV T+ RR Y+P+I S N RR+ A Sbjct: 717 SRQEASDYINKYFERFTGVKDYMERVVTEAKTKGYVTTIFNRRRYIPEINSRNYHRRSFA 776 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 ER AIN P+QGTAADI+K AMI V L+ R+++QVHDEL+ EV ++D+ +A+ Sbjct: 777 ERTAINTPIQGTAADIMKLAMIKVYNRLKENGSPARILLQVHDELILEVPREDLTEMARI 836 Query: 900 IHQLMENCTRLDVPLLVEVGSGENW 924 + ME + VPL+V + SG NW Sbjct: 837 VKSEMEKAVDMKVPLVVNLESGPNW 861 >UniRef50_C3J9S9 DNA polymerase type I n=2 Tax=Bacteria RepID=C3J9S9_9PORP Length = 937 Score = 963 bits (2489), Expect = 0.0, Method: Composition-based stats. Identities = 385/951 (40%), Positives = 560/951 (58%), Gaps = 42/951 (4%) Query: 3 QIPQNPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 L L+D S +YRAY AF P +S G T A+ G N L +I + KP + AV Sbjct: 4 TFTGKRLFLLDASMLIYRAYFAFIHTPRFDSKGNNTSALLGFANSLIEIIKKEKPDYLAV 63 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 +FD +G +FR + YK+ R P+ + + +++A+ +P + V EADDV+GT Sbjct: 64 IFDPEGGSFRHREYTAYKAQRDATPEGILWAFPQVKRLLEALRIPAIEVPDYEADDVVGT 123 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN--TILGPEEVVNKYG-VPPELII 177 L++ AEK G V + T DKD QLVT + + T + G EV K+G V ++ Sbjct: 124 LSQRAEKEGFEVYMVTADKDYGQLVTEHALMYRPGTKGAEVWGEAEVCEKFGLVHCSQMV 183 Query: 178 DFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLE 237 D+LAL+GD+SDNIPG G+G K A LL G +D +Y ++++ ++ KLE Sbjct: 184 DYLALVGDASDNIPGCKGIGPKKASELLTQFGSIDAIYEHLDELS-------PSLKKKLE 236 Query: 238 QNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADV------ 291 + +E LS LA I T+V +E+ E +P +L L ++E + Sbjct: 237 EGRENTLLSRYLAKICTEVPMEVEWETFRHLEPNVPQLRALLAEFEMHTLAKRLLPNEGE 296 Query: 292 --EAGKWLQAKGAKPAAKPQETSVAD--EAPEVTATVI-------SYDNYVTILDEETLK 340 + G L + + + +E S A+ +PE TA++ + Y + +E K Sbjct: 297 AADWGGGLFSSSSTSQDEGKEPSEANSLFSPERTASLQGLTTLKDTAHTYHVVRTKEEQK 356 Query: 341 AWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRER 400 A+L ++ FAFDTETD L+ ++A++V SFA E G A Y+P+ D+ +A Sbjct: 357 QLWARLAESKQFAFDTETDGLNPLTASIVVASFAPEEGEAYYLPLPQDFDEAC------A 410 Query: 401 ALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDS 460 L+ L L+ + + LK+ QN K+D+ +LA YG+ FDT++ Y++ RH++D+ Sbjct: 411 ILQPLDALMRNSEILKMAQNAKFDQKLLARYGVSSATPLFDTLVAHYLIAPDQ-RHNLDT 469 Query: 461 LAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHK 520 LAE++L ++TI + +++ K KN +A E YAAEDADV +L+ + L++ + Sbjct: 470 LAEQYLGYRTIAYSDLSEK-KNFDLRRDVAEELLVDYAAEDADVVRRLYPLLREKLEQEQ 528 Query: 521 GPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNL 580 +F +EMPLV VL R+ER GV++D + LH SE+LT L E E AG FN+ Sbjct: 529 -QEKLFWEVEMPLVGVLERMEREGVQLDVQRLHEVSEKLTNDLRETEDAIFHWAGHSFNV 587 Query: 581 SSTKQLQTILFEKQGIK-PLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKST 639 SS KQ+ +LFE+ G+ KKT STSEEVL + +P+ + IL+YRGL KL T Sbjct: 588 SSPKQVGVVLFEELGLHAKGKKTKTNTYSTSEEVLSKCVDQHPIVQKILDYRGLKKLIGT 647 Query: 640 YTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE-D 698 YT+ LP ++ P GR+ TSY+QAVT TGRLSS+DPNLQNIP+R+ G+ IR AF+ + Sbjct: 648 YTEALPELVYP-DGRLRTSYNQAVTVTGRLSSSDPNLQNIPIRSAMGQEIRSAFVPRSSE 706 Query: 699 YVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAK 758 + +SADYSQIELR+MAH S+D+ L+ AF EG+D+HR+TAA ++ + E VT QR AK Sbjct: 707 FTFLSADYSQIELRLMAHFSQDEHLIKAFVEGEDVHRSTAARIYNVAPEEVTPLQRSHAK 766 Query: 759 AINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETL 818 NFG+IYG+SA+GL+++LNI EA + YFE YP V YM+ +A++ GY ETL Sbjct: 767 TANFGIIYGISAYGLSQRLNIDPSEASSLISSYFENYPAVRAYMDECVQKARKLGYTETL 826 Query: 819 DGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIM 878 GRR YLPDI S + R AER A+NAP+QGTAAD+IK AMI +DA ++ + RMIM Sbjct: 827 LGRRRYLPDINSRSATVRQFAERNAVNAPIQGTAADLIKVAMIRIDAKMRERNMKSRMIM 886 Query: 879 QVHDELVFEVHKDDVDAVAKQIHQLMENCT-RLDVPLLVEVGSGENWDQAH 928 QVHDEL F+ + +VD + +HQ M L VPL VE+G G +W +AH Sbjct: 887 QVHDELNFDAYLPEVDELRALVHQEMCQAIPNLRVPLEVEIGVGSSWLEAH 937 >UniRef50_A9G0B1 DNA polymerase I n=3 Tax=Sorangium cellulosum 'So ce 56' RepID=A9G0B1_SORC5 Length = 900 Score = 962 bits (2488), Expect = 0.0, Method: Composition-based stats. Identities = 402/923 (43%), Positives = 552/923 (59%), Gaps = 42/923 (4%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 L LVD S Y++RAYHA PL++ +GEPT A YG + ML L+ + KP + V D+ GKT Sbjct: 17 LYLVDLSGYVFRAYHAISPLSSPSGEPTHATYGTVAMLTKLVDERKPAYLGVAMDSPGKT 76 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FRDEL YK+HRPP P DL Q+ +V+A +P+ G+EADD++ A++ Sbjct: 77 FRDELDPRYKAHRPPPPPDLGVQMSRCREIVEAYRIPIFIQEGLEADDLVAVAVARAKER 136 Query: 129 GRPVLISTGDKDMAQLVT-PNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSS 187 G V+I++ DKD+ QLV + L + M + + G EVV K+GVPPE + D LAL+GD+S Sbjct: 137 GLRVVIASSDKDLMQLVDGEQVMLWDAMRDKVYGHPEVVAKFGVPPEQVRDLLALVGDTS 196 Query: 188 DNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSY 247 DN+PGVPGVG KTA LL G L +Y ++ + L+QN+ A LS Sbjct: 197 DNVPGVPGVGLKTAAELLAQFGSLSAIYERIGEVK------KPRIRESLQQNEADARLSQ 250 Query: 248 QLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAK 307 +L T+ + L E L L LF + F R+ V A Sbjct: 251 KLVTLDGGAPVSLDLETLRYGGADTGRLRELFTELGFSRFLKAVRA-------------- 296 Query: 308 PQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISAN 367 PE TA + Y + E L+ + A A D S + +SA+ Sbjct: 297 ----------PEPTARAAT---YRVLTTREELEGFARSARAAGRLALDVLATSREPMSAH 343 Query: 368 LVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGI 427 + G++ A EPG A Y+P+ H YL AP Q+S ++ PLL D + KVG ++K+ I Sbjct: 344 VCGVALACEPGQAVYVPLGHRYLGAPAQLSMSDIDAVMGPLLADPELPKVGHDVKFCEVI 403 Query: 428 LANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK--GKNQLT 485 L + I L G++FDTML SY+L+ G++ + LAER L K T +E+A K G+ Q Sbjct: 404 LLRHRIGLVGVSFDTMLASYLLDP-EGKNQLHELAERELGAKMQTLDEVAPKRRGQAQRA 462 Query: 486 FNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGV 545 ++I L EA Y A ADV L L ++ P L+ K ++ IE+PL VL+ +E GV Sbjct: 463 LDEIELGEASSYGAAFADVALSLTDRLRPRLRAEK-LEDLLVQIELPLSAVLAEMELTGV 521 Query: 546 KIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGG 605 +DP+ L ++T LA LE+KA EI G + NL+S KQL+ +LF++ ++ +KT G Sbjct: 522 LVDPQALAQLGAQMTTELAALEQKAREIVGHDINLASPKQLEAVLFDELKLRSQRKTKTG 581 Query: 606 APSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTA 665 ST +VLE L+ ++P P V+LE+R +AKLK TY D LP +++P TGR+HT + QAV A Sbjct: 582 R-STDADVLEALSEEHPFPGVVLEHRAIAKLKGTYVDALPRLVHPGTGRIHTRWGQAVAA 640 Query: 666 TGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLT 725 TGRLSS DPNLQNIP+R E GR IR+AF+AP VIVSADYSQIELR++AHLS+D L+ Sbjct: 641 TGRLSSQDPNLQNIPIRTELGRMIRRAFVAPPGSVIVSADYSQIELRVLAHLSKDPVLVD 700 Query: 726 AFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQ 785 AF G+D+H TA E+FG+ VT+E RR +K INFG+IYGM LA++L+I R EA Sbjct: 701 AFRTGQDVHVRTAMEIFGVDQAGVTAEMRRRSKTINFGVIYGMGESALAKRLDISRAEAA 760 Query: 786 KYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAIN 845 +++D YF RY GV E+ME T A+AK V TL GRR LPD++SS+ RRA AER A N Sbjct: 761 RFIDAYFARYRGVHEFMEGTMAEAKRSESVRTLLGRRRLLPDLRSSDRMRRAQAERIAQN 820 Query: 846 APMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLME 905 P+QGTAAD++K AM+ V + P RM++ VHDEL FEV + VD ++ + ME Sbjct: 821 TPIQGTAADLLKLAMVRV---PRPVVPGARMVLTVHDELAFEVPAEAVDEAKAKVREAME 877 Query: 906 NCTRLDVPLLVEVGSGENWDQAH 928 + LDVPL+V+VG G W AH Sbjct: 878 SVFPLDVPLVVDVGHGPTWADAH 900 >UniRef50_Q2RHE8 DNA polymerase I n=4 Tax=Clostridia RepID=Q2RHE8_MOOTA Length = 885 Score = 961 bits (2485), Expect = 0.0, Method: Composition-based stats. Identities = 371/930 (39%), Positives = 513/930 (55%), Gaps = 58/930 (6%) Query: 4 IPQNP--LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 +P L+LVDG+S ++RA+HA PPL G T A+YG ML+ +KP + V Sbjct: 1 MPTKTARLLLVDGNSVIHRAFHALPPLQTREGIRTNAVYGFATMLQKAREMFKPDYIIVA 60 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 FD TFR+EL++ YK RP +LR Q + ++ A L V G EADD+IGTL Sbjct: 61 FDHSKVTFRNELYDEYKGTRPETDPELRPQFALVKRLLAAWNLASCEVEGYEADDLIGTL 120 Query: 122 AREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELII 177 +R+ G VLI TGD+D QLV + ++ ++ E + YG+ PE +I Sbjct: 121 SRQGAATGLEVLILTGDRDALQLVGERVKVLLMRRGLSQVEVIDREAIKKNYGLEPEQLI 180 Query: 178 DFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLE 237 D ALMGD+SDNIPGVPGVGEKTA L++ G L+ + A +I G + +A L Sbjct: 181 DVKALMGDASDNIPGVPGVGEKTAVQLVRQYGDLEGVLAHSGEIKG------RRVAENLV 234 Query: 238 QNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWL 297 + A L+ +LATI + L Q P E +L L+K+ EF DV Sbjct: 235 TFADQARLARRLATIDCQAPVTLDLAGCCNQSPDYEAVLALYKELEFHSLVKDVLRAMEQ 294 Query: 298 QAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTE 357 + K A +S + +T+ E L +A+L A + Sbjct: 295 EGKKASQETT-------------AVRGLSLPDPLTLDSLEELAELVARLVGKTDVALELI 341 Query: 358 TDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKV 417 ++ + A V + A E GVA + ++ L + P+ Sbjct: 342 LNNPSYLEAAAVAVGLAWEDGVAV---LGTAGIEPAALAGTLEPLLRVNPIF-------- 390 Query: 418 GQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIA 477 + K +N G + DTM+ Y+LN A RHD+ L L Sbjct: 391 -HDAKRALVWFSNAGAGVADPGGDTMVAGYLLNPSASRHDLPELCLEHLN---------- 439 Query: 478 GKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVL 537 + + AA A V LH ++ LQ G N++ +E+PL VL Sbjct: 440 --------LALVEGDSPQLAAARRAAVIRLLHRELASKLQVA-GMENLYRRVELPLTRVL 490 Query: 538 SRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIK 597 +E GV ++ + L EL LA L + +E+AGEEFNL+S KQL ILFEK G+ Sbjct: 491 GAMESYGVAVNMETLDLMGIELEGGLAALTEAIYELAGEEFNLNSPKQLAVILFEKLGLP 550 Query: 598 PLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHT 657 P+K+T G ST VLEELA +P+ ++EYR LAKLKSTY D L ++NP+TG +HT Sbjct: 551 PVKRTKTG-FSTDAAVLEELACRHPIAAKLVEYRQLAKLKSTYVDGLKPLVNPRTGSLHT 609 Query: 658 SYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIELRIMAH 716 S++Q VTATGRLSS++PNLQNIPVR E GRR+R+AF+ ++++ADYSQIELRI+AH Sbjct: 610 SFNQTVTATGRLSSSEPNLQNIPVRLELGRRLRKAFVPHGPGRLLLAADYSQIELRILAH 669 Query: 717 LSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQ 776 +S D+ ++ AF G+DIH TAAEVFG+PL VT RRSAKA+NFG++YG+S +GL+R Sbjct: 670 ISGDEAMIAAFRRGEDIHARTAAEVFGVPLGEVTPAMRRSAKAVNFGIVYGISDYGLSRD 729 Query: 777 LNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARR 836 L I R EA Y++ YF RY GV Y+E A+A+++GYV TL GRR YLPD+ SSN R Sbjct: 730 LGISRSEAHDYIERYFRRYRGVKAYLEEIVARARQEGYVTTLLGRRRYLPDLFSSNRNVR 789 Query: 837 AAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAV 896 + ER A+N P+QGTAADIIK AM+ + L+A+ P RMI+QVHDEL+F+V DD+ AV Sbjct: 790 SFGERTAMNTPIQGTAADIIKMAMVKIFRLLEAQYPAARMILQVHDELIFDVPDDDLPAV 849 Query: 897 AKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 A + ME+ L VPL V++ +G NW Sbjct: 850 AGLVKDTMEHTLELQVPLQVDLKAGPNWYD 879 >UniRef50_Q6MEQ2 Probable DNA polymerase I n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MEQ2_PARUW Length = 891 Score = 960 bits (2483), Expect = 0.0, Method: Composition-based stats. Identities = 378/924 (40%), Positives = 539/924 (58%), Gaps = 37/924 (4%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 + L ++D S Y+YR+Y A +TN+ GE T A++G + + LI + PTH VFD Sbjct: 2 DKLYILDASGYIYRSYFAIRQMTNARGESTNALFGFIRSVLKLIKDFNPTHLVAVFDGPN 61 Query: 67 KT-FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 + R EL+ YK+HR MP DL QI + MG+P L V GVEADD +G++A+ A Sbjct: 62 NSQKRTELYPAYKAHRKEMPKDLLYQILWSQRFCQLMGIPELMVPGVEADDTMGSIAKWA 121 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNT-ILGPEEVVNKYGVPPELIIDFLALMG 184 I T DKDM QLV+ I ++NT + I+ V ++GV P +ID+LA++G Sbjct: 122 ATLNTTAYICTSDKDMCQLVSNQILILNTFKDNLIIDANGVKEQFGVMPAQMIDYLAIIG 181 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 D+SDNIPG+ G G KTA LL+ G LD + P +++G K L KE Sbjct: 182 DASDNIPGLTGFGPKTAADLLEKFGSLDYILEHPLEVSG------KKKQDTLISEKEKVL 235 Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304 LS +L + T V + ++ PA + L + + F ++EA K Sbjct: 236 LSKKLVIVDTTVSFPNQEDFFKLTSPAYQSLKEFYAEMNFSSLIRELEAVK--------- 286 Query: 305 AAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNI 364 + ++ E V+ Y + DEETL I+ L + DTET L + Sbjct: 287 ------SGISFSDLESQNEVV----YQLVNDEETLVNLISYLSQQKEICLDTETTDLRPL 336 Query: 365 SANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYD 424 A LVG+ +EP A YIP+ Q++ + L LKPLLE+ G N KYD Sbjct: 337 EAQLVGIGLGVEPKKAWYIPLN-------GQLNGDFVLSQLKPLLENPSIGFYGHNFKYD 389 Query: 425 RGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQL 484 +L N+ I + I+FDT+L SY+LNS +H +D LA I +E+ GKGKNQL Sbjct: 390 YHVLRNHNISVANISFDTILASYLLNSHKRQHSLDHLALELFDKVKIAIQELIGKGKNQL 449 Query: 485 TFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNG 544 +AL++ Y ED D T++L + L + + ++ ++E+PL+ VL+++ERNG Sbjct: 450 NMKNVALDKICHYCCEDVDYTIRLKNILLSQL-EERKLTSLLFDLELPLLSVLAQMERNG 508 Query: 545 VKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPG 604 + ID L + S+ + + LE+ + +AGE FNL+S KQL ILF K GIKP KK Sbjct: 509 IFIDTAYLKHLSQFIGQEIHCLEQNIYALAGEIFNLNSPKQLSQILFHKLGIKPPKKIAT 568 Query: 605 GAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVT 664 G ST+ EVLE L YP+ + +LEYR L KL+STY + LPL +N KTGR+H +++Q++ Sbjct: 569 GH-STNAEVLEILKHVYPIAEKLLEYRTLEKLRSTYVNSLPLQVNAKTGRIHCNFNQSMA 627 Query: 665 ATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQIELRIMAHLSRDKGL 723 ATGRLS DPNLQNIPVR E GR+IR+AF ED+ +SADYSQIELR++AHLS D L Sbjct: 628 ATGRLSCQDPNLQNIPVRTEVGRQIREAFRPEKEDWSYLSADYSQIELRLLAHLSEDPVL 687 Query: 724 LTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKE 783 + AF +DIH+ TA+ +F +PL+ V+SEQR AKA+NFGLIYG AFGLA +L I K Sbjct: 688 IKAFLSNEDIHKYTASLIFDVPLQQVSSEQRYQAKAVNFGLIYGQQAFGLAHELGIDTKT 747 Query: 784 AQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAA 843 A ++ YFERY V E++E + A+E G T+ GR LP+I+S N RA A+R A Sbjct: 748 AAAFIQRYFERYGKVKEFLEACKQSARETGKAVTMYGRERLLPEIRSQNAMIRATADRFA 807 Query: 844 INAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQL 903 +N P+QGT AD+IK AM+ ++ L E+ + MI+Q+HDEL+FEV ++++++ + Sbjct: 808 VNTPIQGTQADLIKMAMLKINKLLIQEKKKGFMILQIHDELIFEVPNQELESISHLVKNT 867 Query: 904 MENCTRLDVPLLVEVGSGENWDQA 927 MEN L VPL+V + G+NW + Sbjct: 868 MENIINLKVPLIVNIHIGKNWKEC 891 >UniRef50_Q7VRJ4 DNA polymerase I n=3 Tax=Enterobacteriaceae RepID=Q7VRJ4_BLOFL Length = 943 Score = 960 bits (2483), Expect = 0.0, Method: Composition-based stats. Identities = 449/936 (47%), Positives = 625/936 (66%), Gaps = 13/936 (1%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 NP+ILVDGS Y+YRAYHA+PPLT G+P +YGV++M++SLI +Y+P+H AV+FD Sbjct: 8 HNPIILVDGSFYMYRAYHAYPPLTTQNGQPVWVIYGVISMIKSLITRYQPSHMAVIFDVS 67 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 GKTFRD+LF+ YKS+R +PDDL QI P H ++KAMG+ +L + VEADDVI TLA Sbjct: 68 GKTFRDDLFKQYKSNRIKIPDDLSIQIIPTHKIIKAMGISVLNIPNVEADDVIATLATFY 127 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185 + + VLISTGDKDMAQ+V+ NI LINTM+N +L P EV K+GVPP LI D+LAL+GD Sbjct: 128 AQLNKTVLISTGDKDMAQIVSSNIILINTMSNIMLNPTEVEKKFGVPPTLIADYLALVGD 187 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 +DNIPGVPG+G+KTAQ +L +G L+ LY I L+ RG K + L NKE+A+L Sbjct: 188 RADNIPGVPGIGKKTAQIVLNQIGNLNILYQNLNNILQLNIRGRKKIYQALLINKELAFL 247 Query: 246 SYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWL-----QAK 300 Y+LATIK DV L+ + +L +Q+ ++L+ LF +YEF W D+++GKW + K Sbjct: 248 CYKLATIKIDVPLQESDYKLLIQEINTQDLILLFTQYEFNTWLTDLQSGKWNNTNKYEKK 307 Query: 301 GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDS 360 A + + ++ ++ I + TLK WI + + +D+ Sbjct: 308 IISTAYTKHANTKIIQNSSYNNLKLNNNSNYIIYNTATLKHWIKQNYHKNHLILNIHSDN 367 Query: 361 LDNISANLVGLSFA---IEPGVAAYIPVAHDY-----LDAPDQISRERALELLKPLLEDE 412 + +AN++GL + I YIP++++ + + +S + L L+P+LE+ Sbjct: 368 SNIFTANILGLCLSLYNIYINQYIYIPISNNIQIPNQYNNKNYLSLKNVLLNLQPILENP 427 Query: 413 KALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTIT 472 +K+GQN+K++ +L + I L G FD +LE YIL ++ + + + Sbjct: 428 AVVKIGQNMKFNYSLLKRHNINLSGKIFDVILEFYILYGTTNYQNIKRFLNKETFNSILN 487 Query: 473 FEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMP 532 F++ N + + + YA + LH +WP L + +F+ IE+P Sbjct: 488 FQQSYDNYNNYIVKEIKNIYQESLYAIQLILAIFDLHQILWPQLYSNDKLKKIFQEIEIP 547 Query: 533 LVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFE 592 L+ +L+ IE GV ID +L ++S EL + L L+ +A+++AG FNL S KQLQ IL++ Sbjct: 548 LISILAHIESYGVLIDKTLLCSYSMELNVHLNTLQNQAYQLAGTSFNLDSIKQLQEILYK 607 Query: 593 KQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKT 652 KQ + LKKTP G+PST+EEVL++L+ YP+PK+IL+YR L+KLKSTYT+KL M+N ++ Sbjct: 608 KQKLPILKKTPSGSPSTNEEVLKKLSHKYPIPKIILKYRSLSKLKSTYTNKLISMVNTES 667 Query: 653 GRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELR 712 R+HTSY+Q TATGRLSS +PNLQNIP RN +GR+IRQAFIAP VIVSADYSQIELR Sbjct: 668 NRIHTSYNQTRTATGRLSSANPNLQNIPNRNHDGRKIRQAFIAPSHSVIVSADYSQIELR 727 Query: 713 IMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFG 772 IMAHLSRD L+ F GKDIH TA+E+F L VT+EQR AK INFGLIYGMSAFG Sbjct: 728 IMAHLSRDFKLINDFLSGKDIHTTTASEIFVTSLNLVTNEQRHQAKTINFGLIYGMSAFG 787 Query: 773 LARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSN 832 L++QL++ EAQKY+D YF+RYPGV++Y++ + + GYV TL+GR+LYLP+I S N Sbjct: 788 LSKQLSVTCYEAQKYVDRYFQRYPGVMQYIQHIKDNVYKYGYVSTLEGRKLYLPNIYSKN 847 Query: 833 GARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDD 892 +++ AERAAINAPMQG+AADIIK+AMI+++ WL+ + V+MIMQVHDELVFEV + Sbjct: 848 LSKKKGAERAAINAPMQGSAADIIKKAMISINYWLKQDDIPVQMIMQVHDELVFEVQNNF 907 Query: 893 VDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 +D KQI +LME C LDVPL V++G G+NW+QAH Sbjct: 908 IDTAIKQIKKLMEECFILDVPLKVDIGVGKNWEQAH 943 >UniRef50_A7HD60 DNA polymerase I n=2 Tax=Cystobacterineae RepID=A7HD60_ANADF Length = 899 Score = 960 bits (2482), Expect = 0.0, Method: Composition-based stats. Identities = 361/929 (38%), Positives = 521/929 (56%), Gaps = 38/929 (4%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L L+DGS +++RAYHA P L+ + G PT A+YG ML + ++ PTH +V DA Sbjct: 2 PTLTLIDGSGFVFRAYHAIPHLSTTRGTPTNAVYGFTTMLLKALREHAPTHVVLVMDAGR 61 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 K+FR+E+ YK++RP PDDL+ Q + + A+ +P + GVEADDVI TLA A Sbjct: 62 KSFRNEIDPAYKANRPEAPDDLQVQFPLVREVADALAVPRIEEPGVEADDVIATLASRAR 121 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTM-----TNTILGPEEVVNKYGVPPELIIDFLA 181 + G V++ TGDKD QLV ++L + M GP EV K GV P+ +I+++A Sbjct: 122 EQGWEVVVVTGDKDFGQLVDERLSLYDPMAEASGRGGWTGPGEVEKKLGVRPDQVIEYMA 181 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 ++GD DN+PG+PG+GE TA AL++ G ++ + PE+I RG + + K+ ++E Sbjct: 182 ILGDKIDNVPGIPGIGEVTAAALVRHFGTVEEMLRRPEEIKAALSRGGEKVKEKIVASEE 241 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 + QL +++ D+ L Q E ++P + LF + EF R D+ A Sbjct: 242 RIRKNRQLVSLRRDLVLPFAPGQFERRRPDEARVRALFSELEFSRLLKDLPAPPPTPRTE 301 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 A A A + + Sbjct: 302 RAELILDAGALAAAVAALSAAPAVGVRPVLG---------------------------GP 334 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 + +VGL+ A G A Y+P+ H YL AP Q+S E A L+PLL + K + Sbjct: 335 APRTDPVVGLALA-GGGRAFYLPLRHQYLGAPAQLSAEEAAGALRPLL-SGELPKHAHDR 392 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEE--IAGK 479 K + LA G+ L G DT L S +L H + +A + + A + Sbjct: 393 KGVQHALAQLGLALGGPGADTDLASRLLLPTRREHALADVARERIGCELPRDPSGGDAAR 452 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 ++ + +E G +AA+ A L L + L + +G L ++ ++E PLVPVL Sbjct: 453 KSERVPVEGLEVERVGEWAAQCAASLLDLAPALERAL-ESEGLLPLYRDVERPLVPVLCE 511 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 +ER G+ +D + S E + +LE + H AG FN++ST++L +LF + + L Sbjct: 512 MERAGILVDRAAMEGMSAEFGRTMQDLEARIHAAAGHPFNIASTRELAQVLFTELALPVL 571 Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 K+ G PST ++VLE+LA + LP+++LE+R LAKLK TY D LP +++P+ GR+HT++ Sbjct: 572 KRLKTG-PSTDQDVLEKLAEQHELPRLVLEHRALAKLKGTYVDALPQLVDPRDGRIHTTF 630 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSR 719 HQA ATGRLSS+DPNLQNIPVR E RRIR AF+AP + ++SADYSQIELRI+AH S Sbjct: 631 HQAGAATGRLSSSDPNLQNIPVRTELSRRIRAAFVAPPGWRLLSADYSQIELRILAHYSD 690 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 D LL AF +D+H TAAE FG+ VTS+ RR AK +NFG+ YG+SAFGL+++L++ Sbjct: 691 DPALLEAFRLREDVHTRTAAETFGVATGEVTSDMRRIAKVLNFGIAYGLSAFGLSQRLDL 750 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 P EAQ +D YF RY GV Y+E+ A+ G TL GR +P+I + N A R AA Sbjct: 751 PGAEAQGIIDRYFARYAGVRRYVEKAVEDARATGESRTLFGRARAMPEIAARNPALRNAA 810 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 ER AIN P+QGTAADI+K AMI V L + R R+++QVHDELV EV +D++ V Sbjct: 811 ERTAINTPIQGTAADIVKVAMIRVHDALAGDARRARLLLQVHDELVLEVPEDELAPVEAL 870 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWDQAH 928 + + M +L VPL VEVG G +W +AH Sbjct: 871 VRREMGGAAQLKVPLDVEVGVGHSWAEAH 899 >UniRef50_Q2JPZ4 DNA polymerase I n=3 Tax=Cyanobacteria RepID=Q2JPZ4_SYNJB Length = 931 Score = 960 bits (2482), Expect = 0.0, Method: Composition-based stats. Identities = 372/947 (39%), Positives = 526/947 (55%), Gaps = 48/947 (5%) Query: 7 NPLILVDGSSYLYRAYHAFPP-----LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 L+LVDG S YR+++AF L S G PT +G L L ++ +Y PTH AV Sbjct: 6 PTLLLVDGHSLAYRSFYAFAYSREGGLRTSTGIPTSVSFGFLKSLLEVLDKYTPTHVAVA 65 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 FD + TFR E E YKS RP P + +E L ++ A+ +P+L V G EADD++GTL Sbjct: 66 FDTRQPTFRHEADETYKSGRPETPPEFIEDVENLKQVLTALRIPILVVPGFEADDILGTL 125 Query: 122 AREAEKAGRPVLISTGDKDMAQLVT--PNITLINTMTNTIL---GPEEVVNKYGVPPELI 176 +R A + R V I +GD+D+ QL+ + +++ + + GPE+V K G+ P + Sbjct: 126 SRLAPQDYR-VQILSGDQDLFQLIDTDGRVRVLHLNSKDRISEFGPEQVKEKLGIWPWQV 184 Query: 177 IDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKL 236 +D+ AL GD SDNIPGV G+G K A LL+ G LD ++ ++I G + L Sbjct: 185 VDYKALCGDPSDNIPGVKGIGPKRAVELLERYGSLDEIFDHLDEIQG-------KVQQYL 237 Query: 237 EQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGK- 295 ++ A+ S +A IK DV L E +++ ELL L +K EF + A V + Sbjct: 238 KEGIPAAHHSQFMARIKCDVPLSPDWESMKLTGFDQAELLPLLEKLEFHSFIAQVRKIQT 297 Query: 296 ------------WLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWI 343 PA P E D A + S I E L+ Sbjct: 298 ALGGIPTEAEVVGAFNPTGDPANAPDEALWFDFALDPVP---SLPAVRIIDTPEQLELLR 354 Query: 344 AKLEKAP-VFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERAL 402 +L P + A+DTET SLD A LVG+ G AY+P+ H + E Sbjct: 355 QELLACPGIVAWDTETTSLDPRDAQLVGIGCCWSEGDIAYLPIGHR---QGSNLDWELVK 411 Query: 403 ELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLA 462 + L+PL ED K QN KYD I +GI L+GI FD ML SY+L+ A H++ LA Sbjct: 412 QSLQPLWEDPNRPKSLQNCKYDLSIFRAHGIRLQGIQFDPMLASYVLDPEAS-HNLADLA 470 Query: 463 ERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQK-HKG 521 L T +++++ GK + + I + + Y DA +L + LQK Sbjct: 471 ATHLNLPTTSYKKLLGKEQ---SIADIPISKVAEYCGTDAYCAYRLVPILTEKLQKTDPR 527 Query: 522 PLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLS 581 ++F +E+PL VL +E G+++D + L S+EL L LE+KA+ AGE FNL+ Sbjct: 528 LWDLFIQVELPLAQVLEEMEWIGIRVDTEFLRQFSQELEQELQSLEQKAYAQAGETFNLN 587 Query: 582 STKQLQTILFEKQGIKPLKKTPGGA-PSTSEEVLEELALDYPLPKVILEYRGLAKLKSTY 640 S KQL ++LFEK + K ST VLE+L D+PL + I++YR LAKLKSTY Sbjct: 588 SPKQLGSLLFEKLKLDIRKTRKTATGYSTDASVLEKLEGDHPLIETIVQYRTLAKLKSTY 647 Query: 641 TDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYV 700 D LP ++ TGRVHT ++Q VTATGRLSS++PNLQNIP+R E RRIRQAFI E ++ Sbjct: 648 VDALPALVRSDTGRVHTDFNQTVTATGRLSSSNPNLQNIPIRTEFSRRIRQAFIPQEGWL 707 Query: 701 IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAI 760 + +ADYSQIELRI+AHLS++ LL F G+D+H TA + + +TSE+RR AK I Sbjct: 708 LTAADYSQIELRILAHLSQEPALLEGFRSGEDVHTLTARLLL--EKQEITSEERRLAKTI 765 Query: 761 NFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDG 820 N+G+IYGM A AR + EA++++ + ERY G+ Y+ T A ++ GYVET+ G Sbjct: 766 NYGVIYGMGAQRFARTAGVSLSEAKQFLQRFNERYAGIFAYLRSTEAFVEKHGYVETILG 825 Query: 821 RRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQV 880 RR Y P++ G R+ A RAA+NAP+QG+A+DIIK AM+ + LQ R R+++QV Sbjct: 826 RRRYFPNLSRLTGHRKQAELRAAVNAPIQGSASDIIKVAMVRLRQKLQ--NFRSRLLLQV 883 Query: 881 HDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 HDELVFEV + A+ I + ME L +PL+V++ G NW +A Sbjct: 884 HDELVFEVDPSEWQALKPLIQREMEGAVPLSIPLVVDIQIGHNWKEA 930 >UniRef50_A5CXW1 DNA polymerase I n=2 Tax=sulfur-oxidizing symbionts RepID=A5CXW1_VESOH Length = 909 Score = 958 bits (2477), Expect = 0.0, Method: Composition-based stats. Identities = 418/925 (45%), Positives = 594/925 (64%), Gaps = 23/925 (2%) Query: 8 PLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 LIL+DGS++L+RAY + LTN G PTGAM+GV+N ++SL +Y+ ++FDA+ Sbjct: 4 KLILMDGSAFLFRAYFSTLKQNLTNQNGFPTGAMFGVINAMKSLQRKYQEARIIIIFDAR 63 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 GK FR ++ YK++R P+ L QIEPL+ M++AMG+ + VS VEADDVI TL+ A Sbjct: 64 GKNFRHNIYPQYKANRKPIDGGLVVQIEPLYEMIQAMGIHFICVSKVEADDVIATLSCCA 123 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185 + +I++GDKD+ QLV NI+ +N M + + V+ K GV PE I+DFLAL GD Sbjct: 124 NQNNIKTIIASGDKDLMQLVGTNISQLN-MKGVLHDRQSVIEKIGVAPEKILDFLALTGD 182 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 S+DNIPGVP VG KTA LQ + + +I G + KL N ++ L Sbjct: 183 SADNIPGVPSVGPKTAIKWLQIYSDILGIKENAMQIKG-------KVGEKLRDNFDLLDL 235 Query: 246 SYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPA 305 SYQL +K DV L + ++L L+++Y F W ++ L+ K + Sbjct: 236 SYQLVKLKFDVVLPCNILD-DEPVKNIDKLANLYQQYGFFMWLKQLDNVSVLKQKSIQVI 294 Query: 306 AKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNIS 365 D + ++ + + +LD + +++L+ F F + SLD ++ Sbjct: 295 GT-------DTGVNNSVDILKGYSQILVLDLDIFNTMVSRLKILKTFVFSLKATSLDYMN 347 Query: 366 ANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDR 425 A++VG F I + Y+PV HDY+DAP Q++ L LKP+LED K+GQNLKYD Sbjct: 348 ASIVGWVFLI-DKDSFYVPVNHDYIDAPKQLNFNDVLNQLKPILEDVSISKIGQNLKYDA 406 Query: 426 GILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLT 485 IL+NY I+L+GI+ D +++SY LNSVA RH+M+ L+E +L ++TI F +I GKGK Q+T Sbjct: 407 HILSNYKIDLQGISDDVIVKSYCLNSVATRHNMNDLSEYYLNYQTINFVDILGKGKKQVT 466 Query: 486 FNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGV 545 FNQ+ +E A Y E+ +T L+ + ++ ++ + +++N+E+PL+ VL +ERNGV Sbjct: 467 FNQVNVEIALLYVCENVIITSLLNHMLDEEIAQYPRLVKLYQNLELPLIKVLLCMERNGV 526 Query: 546 KIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEK--QGIKPLKKTP 603 ++D +L ++T ++ +++ + E+A FNL S KQ+Q ILFE G+ PL+KTP Sbjct: 527 ELDVNILSTQQLDITQQMEDIKNQVFELADNVFNLESPKQIQRILFESKGLGLIPLRKTP 586 Query: 604 GGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAV 663 G PST+EE L+ L D+P+ +IL YR LAKL STY + LP I+ T R+HTSY+Q V Sbjct: 587 KGVPSTNEEALKLL--DHPVVDLILSYRTLAKLNSTYLEVLPRKIDLNTHRLHTSYNQVV 644 Query: 664 TATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGL 723 TATGRLSS++PNLQNIP+ +E+G IR AFI + VI+SADYSQIELRIM LS+D+ L Sbjct: 645 TATGRLSSSNPNLQNIPIFSEQGSCIRGAFITGKGNVIISADYSQIELRIMTQLSKDQNL 704 Query: 724 LTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKE 783 L AF KD+H TA+ +F +P++ VTSE RR AKAINFGLIYGMSA+GLA+Q+ + R + Sbjct: 705 LEAFNNDKDVHSETASTMFNIPIDEVTSEYRRRAKAINFGLIYGMSAYGLAKQIGVSRTK 764 Query: 784 AQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAA 843 A++YMD YF+ YP VL YM+ + AK QGYVET+ GRRLYLP I + N + A R A Sbjct: 765 AKQYMDTYFDNYPSVLYYMDNIKEIAKVQGYVETIMGRRLYLPQINAKNKMLQQHALRTA 824 Query: 844 INAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQL 903 INAPMQG++ADIIK++M V W+ + P +RMIMQVHDELVFEV D +++I L Sbjct: 825 INAPMQGSSADIIKKSMFDVYTWIGQDNPDIRMIMQVHDELVFEVSASKADEFSRKIQAL 884 Query: 904 MENCTRLDVPLLVEVGSGENWDQAH 928 M N LD+PL V+VG G +W +AH Sbjct: 885 MSNTYLLDIPLKVDVGIGNSWKEAH 909 >UniRef50_C8W0H1 DNA polymerase I n=2 Tax=Clostridia RepID=C8W0H1_DESAS Length = 888 Score = 957 bits (2473), Expect = 0.0, Method: Composition-based stats. Identities = 358/931 (38%), Positives = 527/931 (56%), Gaps = 57/931 (6%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 + + N ++++DG+S ++RA+HA P L+ + G PT A+YG NML ++ +P V Sbjct: 6 LTEAKNNTILVIDGNSLIHRAFHAIPLLSTADGLPTNAVYGFTNMLLKILNDIQPKWVTV 65 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 FD TFR++ + YK+HR P++LR Q + ++ A+ + L G EADD+IGT Sbjct: 66 AFDKSKTTFRNQEYSEYKAHRKATPEELRPQFSLVKDVLNALSIKWLEAEGYEADDLIGT 125 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI----LGPEEVVNKYGVPPELI 176 + ++AE+ V+I +GDKD+ QLV+ I T E V K+GV P I Sbjct: 126 IVKKAEEEDADVVILSGDKDILQLVSDKTRAILTKKGITEIEEYNAENVYRKFGVHPNQI 185 Query: 177 IDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKL 236 D+ L GD SDNIPGVPG+G KTA LLQ ++ + A +KI + Sbjct: 186 TDYKGLTGDPSDNIPGVPGIGPKTATKLLQDFDSVENILANLDKI-------TSRARTLM 238 Query: 237 EQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKW 296 E N E A LS +LATI T+V +++T EQ +P EL + KK EFK+ D+ + Sbjct: 239 ENNSEQALLSKRLATIITNVPVQITLEQCIRTEPNEAELFNILKKLEFKKLLRDMLTAET 298 Query: 297 LQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDT 356 + K + S A E Y+T+ ++E + + + +K+ A Sbjct: 299 GNSNQIKQKHLINKQSYAVE-------------YITLSEQEDFEDLLVQAQKSGKVALAL 345 Query: 357 ETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALK 416 + L+ ++ + G +P+ + AL+LL+ + D K K Sbjct: 346 QG----RREKGLISVALCLSEGQNYLLPLNSSTE------TTSFALKLLQNICVDSKIKK 395 Query: 417 VGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEI 476 + K D +L YGIE+ FD ML Y+LN + A L Sbjct: 396 CCYDTKADLWLLHYYGIEINQPGFDVMLADYLLNPGKSARSLPETALSHL---------- 445 Query: 477 AGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPV 536 + + E + Y A+V +L + L + N++ +IE+PL+ V Sbjct: 446 ----------DIVLQEGSETYLPASAEVISRLVDILQSKLL-LQEQENLYYDIELPLLKV 494 Query: 537 LSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGI 596 L+ +ER GV +D + L SEEL +L L +E AGE FN++STKQL +ILFEK + Sbjct: 495 LASMERTGVSVDKEQLQLMSEELNKKLQVLTTDIYEHAGEIFNINSTKQLGSILFEKLKL 554 Query: 597 KPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVH 656 K KKT G ST VLEELA D+P+ ++LEYR LAKLKSTY D L +INP+TG++H Sbjct: 555 KAGKKTKTGY-STDVTVLEELAGDHPVVSLLLEYRQLAKLKSTYVDGLTGLINPQTGKLH 613 Query: 657 TSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIELRIMA 715 T++HQAVTATGRLSS++PNLQN+P+R + GR+IR+ F+ D I SADYSQIELRI+A Sbjct: 614 TTFHQAVTATGRLSSSEPNLQNVPIRLDAGRKIRKFFVPCKPDNFIFSADYSQIELRILA 673 Query: 716 HLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLAR 775 H+++D L+ AFA+ +DIH TA+EVFG+ ++ VT E R AKA+NFG++YG+S FGLA+ Sbjct: 674 HIAQDNNLMDAFAKKQDIHTRTASEVFGVAMDEVTPEMRGRAKAVNFGIVYGISDFGLAK 733 Query: 776 QLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGAR 835 + + RKEA +Y++ YF RY GV Y++R +A+E+GYV T+ RR YLPD+ SSN Sbjct: 734 DIKVTRKEAGRYINNYFNRYSGVKAYIDRVIREAREKGYVTTILNRRRYLPDLFSSNRVV 793 Query: 836 RAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDA 895 R+ ER A+N P+QG+A+DIIK AM+ + ++ + MI+QVHDEL+F+V +V+ Sbjct: 794 RSFGERTAMNTPIQGSASDIIKLAMVLIYREMRKRKLSSTMILQVHDELIFDVVASEVEE 853 Query: 896 VAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 + + MEN L VPL+V++ G NW Sbjct: 854 MQNLVKYYMENAVELSVPLVVDMKIGPNWYD 884 >UniRef50_Q3Z6P9 DNA-directed DNA polymerase I n=5 Tax=Dehalococcoides RepID=Q3Z6P9_DEHE1 Length = 903 Score = 952 bits (2461), Expect = 0.0, Method: Composition-based stats. Identities = 358/930 (38%), Positives = 535/930 (57%), Gaps = 36/930 (3%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPPLT-NSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 + + ++L DG++ ++RAYH PPL GE GA +G ++L ++ KP A+ F Sbjct: 1 MNKPVIVLFDGTNLVHRAYHVLPPLAIRKTGEVVGAAFGFASILIKVLTDLKPDCYAISF 60 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 D KG TFR E+F+ YK+ RPPMPD+L +Q+ + +V A +P+ SG EADDV+GTLA Sbjct: 61 DRKGPTFRHEMFKAYKAQRPPMPDELVSQLGRVRQIVDAFNMPVYEQSGFEADDVLGTLA 120 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTM------TNTILGPEEVVNKYGVPPELI 176 A AG V+I++GD D QLV P+I ++ + ++ V KYG+ PE I Sbjct: 121 TRAAAAGMEVIIASGDADSMQLVGPDIRILYPGPAGSFASTSLYDEVAVRAKYGLGPEHI 180 Query: 177 IDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKL 236 D+ ALMGD SDNIPGVPG+G KTAQ L++ GG++ +Y +KI+ + KL Sbjct: 181 ADYKALMGDPSDNIPGVPGIGPKTAQKLIEEYGGIEDIYKNLDKIS------PPGLQKKL 234 Query: 237 EQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKW 296 N EVA S L TI D+ L+ + E+ + ++++ LF++ EF R + G+ Sbjct: 235 ADNAEVARDSKILTTIVCDLPLDFSIEECRAEHYNRQKVVDLFRELEFFRLIDRLPGGE- 293 Query: 297 LQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDT 356 + P++ A + + D + + + +++L A A Sbjct: 294 ---------------NQLQGTPDMFAVASKVETRYMVADSQNIDSIVSRLANAKELALAV 338 Query: 357 ETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALK 416 + + A L L+ + G A ++P + Q+ L LL DEK K Sbjct: 339 SGTPEEAMDARLTALALSSAAGDACFVPAEFIGSASEGQMFAAEGHSGLAALLGDEKISK 398 Query: 417 VGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEI 476 N KY +L + G ++G+ FDTM+ +++L + L + E I Sbjct: 399 TAHNAKYLMNLLLSAGQAVKGLDFDTMIAAHLL--GEKNLAIKDLVFEHFGIEIADIENI 456 Query: 477 AGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPV 536 + + +F+++ L EA + A AD T +L L + + +++F +EMPL+P+ Sbjct: 457 LTRNGKKASFSEVQLSEAAQLA---ADYTFRLKGIFAAQLAETR-LMDLFARVEMPLLPI 512 Query: 537 LSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGI 596 L +ER G+ +D +L +E+ ++ +LE+ + AG FN+ S +QL ILF++ + Sbjct: 513 LLGMERTGIMLDTDLLKAMAEKTGRQIFKLEEDIYARAGHNFNIGSPQQLGRILFDELKL 572 Query: 597 KPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVH 656 +KKT G ST EVLEEL + + +ILEYR L KLKSTY D LP M+NP T R+H Sbjct: 573 PVIKKTKTGY-STGAEVLEELKGKHRIVDLILEYRMLVKLKSTYLDTLPRMVNPHTRRLH 631 Query: 657 TSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAH 716 TS++Q TATGRLSS++PNLQNIPVR E GR IR+AFIAP V+++ DYSQI+LR++AH Sbjct: 632 TSFNQTRTATGRLSSSEPNLQNIPVRGEMGREIRRAFIAPPGTVLLAGDYSQIDLRVLAH 691 Query: 717 LSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQ 776 LS+D L+ AF +DIH ATAA + +P VT EQRR AK +NFG+IYGMS++GL + Sbjct: 692 LSQDPALIEAFQSDQDIHTATAARLLNIPPSKVTKEQRRLAKTVNFGVIYGMSSYGLEQA 751 Query: 777 LNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARR 836 + +EA K++ YFE+YP V Y + Q + QGYVETL GRR Y+P+I S N R Sbjct: 752 TELSLEEADKFIKAYFEKYPRVAVYFSEIKQQVRTQGYVETLLGRRRYIPEINSPNRILR 811 Query: 837 AAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAV 896 +AER AIN P+QGT+ADIIK AM+ +D L+ E+ + R+++QVHDEL+FEV K ++ + Sbjct: 812 ESAERMAINMPVQGTSADIIKLAMVRLDEKLKEEKLKSRLLLQVHDELIFEVPKTELGRM 871 Query: 897 AKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 + + + M ++PL VE+ SG NW Sbjct: 872 SDLLVETMSGAVAFEIPLKVELKSGANWGD 901 >UniRef50_Q73M72 DNA polymerase I n=1 Tax=Treponema denticola RepID=Q73M72_TREDE Length = 936 Score = 951 bits (2459), Expect = 0.0, Method: Composition-based stats. Identities = 362/948 (38%), Positives = 537/948 (56%), Gaps = 38/948 (4%) Query: 6 QNPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 ++ + ++D +YR+Y AF PLTNS GE A++G L S+ +Y P D Sbjct: 2 KDTIYVLDAYGLIYRSYFAFISRPLTNSKGENVSAIFGFFKSLHSIFTEYNPKLFVTALD 61 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 + TFR E+++ YK+ R PDDL AQI+ + ++K LP + +G EADDVI ++A Sbjct: 62 SLTPTFRHEMYKEYKATRDKTPDDLHAQIDKIEEILKTFKLPTVRCNGFEADDVIASIAA 121 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI---LGPEEVVNKYGVPPELIIDFL 180 AEK GR ++ +GDKD+ QLV+ T++ E V ++GV P+ ++D L Sbjct: 122 LAEKEGRECVVISGDKDLMQLVSKTTTMLKPGKIKAWEGFDAENVKEEWGVYPDGMLDLL 181 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 +L+GDS+DN+PG+ GVG KTA LL+ LD +YA + G + K+E+ K Sbjct: 182 SLIGDSADNVPGIKGVGPKTAVKLLEEYKSLDGIYANTGNLKG-------ALKTKIEEGK 234 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 E AY S +L ++ DV +E Q E LF E + Sbjct: 235 ESAYFSKELIRLRFDVPVEKDLNAYSTSQMDYEAAARLFISEELPNIAKLYSEKIIAEKN 294 Query: 301 GAKPAAKPQETSVADEAPEVTAT---------------VISYDNYVTILDEETLKAWIAK 345 ++ + E E T+ + +Y + + E L + + Sbjct: 295 APSSKENLKQETGLFENSEQTSPEMLPQELGTGEEISLPQNKGDYKLVDEAEELFKIVDE 354 Query: 346 LEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELL 405 K + ++D ET S D ++A + G S A++ G A Y P+ + ++ + A + Sbjct: 355 ALKQGLASYDCETTSEDPLNAEVCGFSLALKEGEAYYFPLKAPCPELGEEAPKLIAFKDA 414 Query: 406 KPL---LEDEKALKVGQNLKYDRGILANYGIE--LRGIAFDTMLESYILNSVAGRHDMDS 460 K L D K + N K+D + + + FDTM+ +++L+ + MD Sbjct: 415 KKAVTKLFDSKMTLIMHNGKFDIQAALSSKLASGISANLFDTMIAAWLLDPARSSYGMDK 474 Query: 461 LAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHK 520 LAE L KTI F+++ +G+N F+ I L+EA YAAEDAD+T + + K P L+K+ Sbjct: 475 LAESILGVKTIRFKDLVKQGQN---FSDIPLKEACPYAAEDADITFRFYKKFLPLLKKN- 530 Query: 521 GPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNL 580 +F ++EMP+ +L+ +E G+ + + L +S+EL L + EK + + G EFN+ Sbjct: 531 NLEKLFFDLEMPITKLLTEMEIKGIFLKGEELTAYSKELGKELEDCEKDIYRLVGHEFNI 590 Query: 581 SSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTY 640 +S KQLQ +LFE++ + P KKT G ST VLE LA + P+P IL+YR LAKLKSTY Sbjct: 591 ASPKQLQEVLFEERKLTPGKKTKTGY-STDTSVLENLASEDPVPAKILDYRALAKLKSTY 649 Query: 641 TDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYV 700 TD LP M + K GR+HTS+ Q TATGRLSS DPNLQNIP+R EGR+IR+AF A + V Sbjct: 650 TDTLPKMTD-KNGRIHTSFIQTGTATGRLSSRDPNLQNIPIRGNEGRKIREAFQAEKGRV 708 Query: 701 IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAI 760 ++SADYSQIEL I+AHLS+D+ L+ AF G D+H TA+ +F + ++ V+ + RR AK I Sbjct: 709 LISADYSQIELVILAHLSKDQNLVEAFNTGIDVHAKTASLIFAVDIKDVSQDMRRIAKTI 768 Query: 761 NFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDG 820 NFG++YGMSAF LA L IPRK A +++ YF Y GV +M +A+++GYVETL G Sbjct: 769 NFGVMYGMSAFRLASSLRIPRKRADEFIKAYFATYSGVSGFMANVCQEAEQRGYVETLMG 828 Query: 821 RRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQV 880 RR YLP I S N +A AER A+N P+QGTAADI+K AM+ VD L+ ++ +++QV Sbjct: 829 RRRYLPAINSKNKVEKAGAERIAVNTPIQGTAADIVKLAMLEVDKALKKQKLDASILLQV 888 Query: 881 HDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 HDEL+ E + + + V + + ME +L VPL V + SG +W + H Sbjct: 889 HDELIIEAAESEREKVMSLVKEKMEGVIKLSVPLRVSIESGMSWGEFH 936 >UniRef50_Q0AVE2 DNA polymerase I n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AVE2_SYNWW Length = 866 Score = 951 bits (2459), Expect = 0.0, Method: Composition-based stats. Identities = 361/925 (39%), Positives = 533/925 (57%), Gaps = 68/925 (7%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 + IL+DG+S LYRA++A P L NSAG T +YG L M ++ + +PTH AV FD Sbjct: 3 DKFILIDGNSLLYRAFYALPLLHNSAGVYTNGVYGFLTMFNRVLAEIQPTHIAVAFDKDR 62 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 TFR+EL+ YK++R P++L Q + L ++ A+ + L + G EADD+IGTL+++AE Sbjct: 63 STFRNELYSEYKANRSAPPEELGGQFQLLRDVLAALNIEYLEMQGYEADDIIGTLSKKAE 122 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLAL 182 + G +I TGD D QLV+ + ++ T + P+ V +K+GV PE +++ L Sbjct: 123 EQGLKTVILTGDGDALQLVSEQVEVLLTKKGISEMELYDPQGVKDKWGVEPEKMVEIKGL 182 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 MGD+SDNIPGVPGVG KTA L+Q L+ LY ++ G K + KLEQN+E Sbjct: 183 MGDASDNIPGVPGVGPKTAMKLVQEFTSLENLYENLPQVKG------KKLVEKLEQNREQ 236 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A+LS QLATI D+EL+ + E +++P ELL L++ EF + ++ Sbjct: 237 AFLSRQLATINRDMELDFSIEDYVMREPHYPELLELYRSLEFNNFLKILQ---------- 286 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 K +E +A E+ + EE + A + ++++ A ++ Sbjct: 287 ---EKEREKGMAPLKQEIEVLFLER--------EEDVTALLEEIKQGESVALYFQSSYHH 335 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 + A+L G+ V + + L+ +K LLE K N K Sbjct: 336 PMWASLQGVFLEYSERVY----------QLKLEAGDDYKLQWIKALLESAVIKKYLHNAK 385 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 + + +L +GIELRG+A DTML +Y+ + ++D+ ++ L+ Sbjct: 386 FIQVLLLRHGIELRGVAGDTMLLAYVDDPAFEGDELDACLKKHLQ--------------- 430 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 L A A + +L+ ++ + + + +EMP+ VL+R+E Sbjct: 431 --------LNIAENNLAALVNTIRELYFQLEGQIPAE--LRELLQEVEMPMSEVLARMEF 480 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 GVK++ L SEEL +A E++ E+AG FN++S KQL +LFE G++ +KK Sbjct: 481 CGVKVERSTLARISEELASGIAGHEERIFELAGSSFNINSPKQLGKVLFEDLGLRVIKKG 540 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST EVLEEL ++ + IL YR L+K+KSTY D L +I+P+TGRVHT + QA Sbjct: 541 KTGY-STGAEVLEELYQEHEIIAHILNYRQLSKIKSTYADALQELIHPETGRVHTIFKQA 599 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQIELRIMAHLSRDK 721 TATGRLSS +PNLQNIP+R EEGRRIRQAF+AP D++I++ADYSQI+LR +AH+S D+ Sbjct: 600 QTATGRLSSVEPNLQNIPIRMEEGRRIRQAFVAPGPDWLIMAADYSQIDLRSLAHISGDE 659 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 L+ F G DIH TA E+F +P+E V SE RR AKA+NFG+IYG+S FGLAR + R Sbjct: 660 RLIETFKSGVDIHTRTAVEIFHVPVEWVDSELRRRAKAVNFGIIYGISDFGLARDTGVSR 719 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 KEA+KY+D Y YPGV +YME + GYVETL RR YLP++ + N +A R Sbjct: 720 KEARKYIDNYLNSYPGVKKYMEDIVEFGRRHGYVETLLKRRRYLPELNARNKMVQAFGRR 779 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 A+N P+QGT+ADIIK AMI VD ++ + + R+++QVHDEL+ E+ + +++ V+ + Sbjct: 780 MALNTPVQGTSADIIKLAMIKVDEEIRKRRLQARLLLQVHDELLLELPRTELEEVSGLLR 839 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQ 926 MEN L VPL V + +G NW + Sbjct: 840 DCMENACSLKVPLEVSLKTGPNWYE 864 >UniRef50_A7NJD5 DNA polymerase I n=2 Tax=Roseiflexus RepID=A7NJD5_ROSCS Length = 972 Score = 949 bits (2453), Expect = 0.0, Method: Composition-based stats. Identities = 380/976 (38%), Positives = 554/976 (56%), Gaps = 67/976 (6%) Query: 6 QNPLILVDGSSYLYRAYHAFPP--LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + L+L+DG + YRA+HA L +S GEPT A+YG + + + I +Y+P +AAV FD Sbjct: 5 RPLLLLIDGHALAYRAFHALAEAGLRSSTGEPTYAVYGFTSAMLNAIEEYQPEYAAVAFD 64 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 GKTFRD+L+ YK++R P + Q+E + ++ A +P+ G EADDVIGTLAR Sbjct: 65 V-GKTFRDDLYAEYKANRAETPAEFEQQLERIKQVLAAFDIPIYTAEGYEADDVIGTLAR 123 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLI-------NTMTNTILGPEEVVNKY-GVPPEL 175 +A + G VLI TGD D QLV ++T++ T G EV +Y G+ P Sbjct: 124 QATERGVDVLILTGDTDTLQLVDDHVTVLLNNPYLRGPKNTTRYGVAEVTERYKGLRPHQ 183 Query: 176 IIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAK 235 + D L GD SDNIPGV G+GE A ALL G ++ LY ++ K Sbjct: 184 LADLRGLKGDPSDNIPGVKGIGEAGAIALLNQFGTIENLYDHLDE-------APKRYQKH 236 Query: 236 LEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEF-KRWTADV--- 291 LE +++A S +LATI D + L + ++ +F++ EF + Sbjct: 237 LEGQRDIALFSKKLATIVCDAPVTLNLADATLADYDRSRVIAVFQELEFGASLVKRLPPS 296 Query: 292 ---------------EAGKWLQAKGAKPAAKPQETSVADEA-------PEVTATVISY-- 327 +A LQA P A S A+ PEV +++ Sbjct: 297 GSTTVAQPLPSIPQADASAPLQADMFAPEAPAVRESSAEPQQLTLFGDPEVVPPPVAHVE 356 Query: 328 -------DNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVA 380 Y + L+A +A+L AP+ AFDTET ++ + +LVGLS A PG A Sbjct: 357 APLRAAPGEYRAACTDADLEAVVAELATAPLVAFDTETRGMNPLRDDLVGLSLATVPGRA 416 Query: 381 AYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAF 440 YIPV H + Q+ R+R + L+ D KV N K+D +L G+ + G++F Sbjct: 417 WYIPVGHTTGEM--QLPRDRVIAALRSFFADPARPKVAHNAKFDIEVLERAGMPVAGLSF 474 Query: 441 DTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAE 500 DTML + +L+ D+ + E L ++ GKGKNQ+TF ++ + A RYAA Sbjct: 475 DTMLAAGLLDKRRNLKDL-AFYELELAEPLDAIGDLIGKGKNQVTFAEVPIARATRYAAA 533 Query: 501 DADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELT 560 DAD+TL+L + L+ ++F +EMPLVPVL R+E++G+ +D + E + Sbjct: 534 DADMTLRLQPALEAKLRAAGSLADMFYRLEMPLVPVLVRMEQSGILLDVPYMRALGERMG 593 Query: 561 LRLAELEKKAHEIAGEEFNLSSTKQLQTILFE---KQGIKPLKKTPGGAPSTSEEVLEEL 617 LA++E++ IAG+ FN++S QL +LF L++T G S + + LEEL Sbjct: 594 RELAQIEQQIFAIAGKPFNINSGDQLSEVLFGPKINLPTTGLERTRTGRYSLTAQALEEL 653 Query: 618 --ALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPN 675 + + ++IL +R L+KLKSTY D+LP ++NP+TGRVHT Y+Q ATGRLSS PN Sbjct: 654 QASDTTGIIELILRHRRLSKLKSTYVDELPALVNPETGRVHTDYNQLGAATGRLSSNSPN 713 Query: 676 LQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHR 735 LQNIP R EEGR +R+ FIA +V+++ADYSQIELR++AH++ D L+ F EG+DIH Sbjct: 714 LQNIPTRTEEGREVRRGFIAAPGHVLIAADYSQIELRVLAHITGDPNLIQTFIEGRDIHA 773 Query: 736 ATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERY 795 ATAA +FG+ V QRR AK + FG+IYG+S FGLA++L I R++A+ +D F ++ Sbjct: 774 ATAARLFGVGFNAVDKNQRRIAKTVVFGVIYGISPFGLAQRLGISREQARNLIDSLFNQF 833 Query: 796 PGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADI 855 P + +Y++RT + +GYV++L GRR + D+++S G RR AAER AIN P+Q TAADI Sbjct: 834 PRIRDYIDRTLETGRNEGYVQSLFGRRRPMFDLRTS-GPRRQAAEREAINHPIQSTAADI 892 Query: 856 IKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCT-----RL 910 +K AMIAVDA L+ + R RM++QVHDEL+FE + +VD V + + ME Sbjct: 893 MKLAMIAVDAELRRRRLRTRMLLQVHDELIFEAPEAEVDEVVALVRERMEGVLSDMHPPF 952 Query: 911 DVPLLVEVGSGENWDQ 926 VPL VE+ G NW++ Sbjct: 953 AVPLRVEIEKGSNWEE 968 >UniRef50_B0TER6 DNA polymerase i n=2 Tax=Heliobacteriaceae RepID=B0TER6_HELMI Length = 939 Score = 946 bits (2445), Expect = 0.0, Method: Composition-based stats. Identities = 363/952 (38%), Positives = 522/952 (54%), Gaps = 57/952 (5%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 +++DGSS L+RA++A P ++ S G T A+YG L ML L +Y+P AV D T Sbjct: 6 FMVIDGSSLLHRAFYALPLMSTSQGVHTNAVYGFLTMLERLRREYQPDFLAVCLDKSRIT 65 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 R + +E YK+ R P++LR Q L ++ A +PL G EADD+IG L A+K Sbjct: 66 HRTQRYEAYKAQRGATPEELRPQFGLLKEVLAAWRIPLFEEEGYEADDLIGALVCLAKKQ 125 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLALMG 184 G LI TGD+D QL++P + ++ T E + K G+ P ++D+ LMG Sbjct: 126 GIDSLIVTGDRDAWQLISPGVEVLFTRKGISELERYDEEALKAKIGLTPRQVVDWKGLMG 185 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 D SDNIPGVPGVGEK A LL+ G +D+LY +++ G + KL ++E A+ Sbjct: 186 DPSDNIPGVPGVGEKRAFKLLEQFGDMDSLYERLDEVKG-------KLKEKLATHREQAF 238 Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGK-WLQAKGAK 303 LS +LATI+ ++ LE E P L L+KK EF+ + + +A+G Sbjct: 239 LSRELATIQCNIPLEPDWEACRAASPDFPALRRLYKKLEFRSLLRHLPGDEGDDEAEGGS 298 Query: 304 PAAKPQET--------------------SVADEAPEVTATVISYDNYVTILDEETLKAWI 343 A+ E S A+ + D V I E L Sbjct: 299 LFARQDEQAVSAVDPMGADGTAGGGVRCSAAEGDKPGDGQAVRPDQAVRIDVEAPLTVEY 358 Query: 344 AKLEKAPVFAFDTE---TDSLDNISANLVGLSFAIEPGVA----AYIPVAHDYLDAPDQI 396 +E + V ++ P + D L I Sbjct: 359 TAVEDGNAIGAMLTELMQIGAEPGCRTAVLAAWEGSPRTGKLKQIVLAAGRDALLRLWVI 418 Query: 397 SR-ERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGR 455 R KP + K+ + K + + GI D +L +Y+L+ +A R Sbjct: 419 DRPGAFFAATKPFWASKDHRKLFFDAKSLWLLARREDTVIEGIDGDGLLGAYLLDPLANR 478 Query: 456 HDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPD 515 + + A W+ K T + + + EE R AA +T + ++ Sbjct: 479 YSLARSAHDWIGWKVDT----------EAGRSVLPPEEGARAAAALFHMTPVMEARLG-- 526 Query: 516 LQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAG 575 +G ++ ++E+PL P+L +E G+K++P VL + EL + L+ +++AG Sbjct: 527 ---EEGLCALYRDVELPLAPILGAMEWTGIKVNPAVLQEMAGELGADIRRLQADIYDLAG 583 Query: 576 EEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAK 635 E FN++ST+Q ILFEK G+ +K+T G ST EVLEELA +P+ +LEYR L K Sbjct: 584 ESFNINSTQQFGKILFEKLGLPVIKRTKTGY-STDVEVLEELADRHPIVPKVLEYRQLMK 642 Query: 636 LKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA 695 LKSTY + L +I+ + GR+HTS++QAVTATGRLSST+PNLQNIPVR E+GRRIR+AF A Sbjct: 643 LKSTYVEGLLPLIDGEDGRIHTSFNQAVTATGRLSSTEPNLQNIPVRLEQGRRIRKAFTA 702 Query: 696 P-EDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQR 754 P +D+ +++ADYSQIELRI+AHLS D AFA+ +DIH TA+EVFG+P+E VTSE R Sbjct: 703 PGDDWTLLAADYSQIELRILAHLSGDPSFKDAFAKNQDIHTRTASEVFGVPMENVTSEMR 762 Query: 755 RSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGY 814 R AKA+NFG++YG+S FGL+R L + R EA++Y+D YF+RY GV Y++ A+A+ QGY Sbjct: 763 RRAKAVNFGIVYGISDFGLSRDLGVLRAEARQYIDGYFDRYSGVKGYIDEIIAEARRQGY 822 Query: 815 VETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRV 874 V TL GRR LPD+ N R+ ERAA+N P+QGTAADIIK AM+ + L A+ + Sbjct: 823 VTTLLGRRRRLPDLFVKNKIRQNFGERAAMNTPIQGTAADIIKAAMVRIPGLLAAKGLKT 882 Query: 875 RMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 RM++QVHDEL+FE K+++ A I + ME RLDVPL V+V +G NW + Sbjct: 883 RMLLQVHDELIFEAPKEELSEAAALIRETMEQTIRLDVPLTVDVKTGPNWYE 934 >UniRef50_C0QYF7 DNA polymerase I n=3 Tax=Brachyspira RepID=C0QYF7_BRAHW Length = 920 Score = 944 bits (2440), Expect = 0.0, Method: Composition-based stats. Identities = 353/936 (37%), Positives = 542/936 (57%), Gaps = 30/936 (3%) Query: 6 QNPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + +++D LYR + F PL NS G+ ++ G + SLI Y + A+ D Sbjct: 2 KKTFLIIDAFGILYRYHFIFLKRPLLNSKGQNVSSINGFMRTYFSLINTYPAEYVAIALD 61 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 + KTFR+E+++ YK +R MPDDLR+QI L+ ++ A+G+ + + EADD++GT+A Sbjct: 62 SSRKTFRNEIYKEYKENRESMPDDLRSQIPILYNLIDALGISRIVLDNYEADDIVGTIAE 121 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI---LGPEEVVNKYGVPPELIIDFL 180 +K +I + DKD+ QLV ++ ++ + + + V K GV P IID L Sbjct: 122 RNKKENIKTIIYSPDKDILQLVDDDVKVVASNKDNELMEYDAQAVKEKRGVYPNQIIDLL 181 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 +LMGD+SDNIPGV GVGEKTA LL+ LD +Y + I G + KL ++K Sbjct: 182 SLMGDASDNIPGVKGVGEKTALKLLEEYKSLDGIYENIDSIKG-------KIQEKLLESK 234 Query: 241 EVAYLSYQLATIKTDVE-LELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEA------ 293 ++AY+SY+LATI+ ++E L ++ + +E+ + + E K+ + + Sbjct: 235 DMAYMSYKLATIERNIEGFNLDYNEIASSKINIDEVNKILDELELKQIRDKINSYIYGSS 294 Query: 294 GKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFA 353 K + K + S +EAP ++A + +Y I +E L+ + + + Sbjct: 295 KKEDKVKISNDKINKDNDSKTEEAPILSAKD-NKSSYYLIENETELENLLKDINSKKLVC 353 Query: 354 FDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEK 413 D ET LD ++G+SFAI+ A Y+ ++ +I +++ + L+ LE E Sbjct: 354 IDFETTGLDTFKDTIIGISFAIKSNEAFYLDLSGRT-----KIDKDKCMNLVFDTLEKED 408 Query: 414 ALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITF 473 +G NLKY+ ++ G + + FDTM+ +Y++N GR++MD LA +L + TI + Sbjct: 409 IKVIGHNLKYEYKMMRAIGKSIGNMYFDTMVAAYLINPTRGRYNMDDLAIAYLSYNTIKY 468 Query: 474 EEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPL 533 ++ K T L++ YA EDADVT + + P L+ H ++F NIEMPL Sbjct: 469 ADLTDNAKK--TLLDAPLKDVVEYACEDADVTFRFYECFAPLLKTH-NLEDLFFNIEMPL 525 Query: 534 VPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEK 593 V VL+ +E +GV I + + S+E + L + ++K ++ AGEEFNL S KQL+ ILF+K Sbjct: 526 VSVLADMEFDGVYISSERMKALSDEYSSLLEKTKEKIYKEAGEEFNLQSPKQLEYILFDK 585 Query: 594 QGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTG 653 GI P KKT G ST EEVL EL+ Y + + +L YR AKLK+TY D P +IN KTG Sbjct: 586 MGIPPTKKTKTG-FSTDEEVLTELSQKYKIAEYMLTYRKYAKLKNTYLDVFPTLINEKTG 644 Query: 654 RVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRI 713 R+H S++Q VTATGRLSS++PNLQNIPVR EEGR IR FI + ++++ADYSQIELR+ Sbjct: 645 RIHASFNQTVTATGRLSSSEPNLQNIPVRGEEGREIRNTFIPEKGNLLIAADYSQIELRL 704 Query: 714 MAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGL 773 +AH S D L+ AF DIHR TA +++ + E VT+ R AK INF +IYG +AFGL Sbjct: 705 LAHFSNDPTLVEAFKNNDDIHRKTAMKIYSVSKEHVTASMRNIAKIINFSIIYGKTAFGL 764 Query: 774 ARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYL-PDIKSSN 832 +++L I RKEA+ ++ YF Y V + E + + +G+V T+ GR L I SSN Sbjct: 765 SKELGIKRKEAEDFIKGYFSTYSRVKPFCEEVVEEVRNKGFVRTMCGRIRDLSKTINSSN 824 Query: 833 GARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDD 892 R AER A+N +QG+AAD+IK AM+A+ + +++MQVHDELV EV + + Sbjct: 825 AMARNEAERMALNTLIQGSAADMIKVAMVAIHKEFKNHLKTAKIVMQVHDELVVEVSEAE 884 Query: 893 VDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 D + ++ME+ + +VP++V++ G +W + H Sbjct: 885 ADKAMTIMKEIMEHSVKANVPIIVDIHKGNSWGEVH 920 >UniRef50_Q04957 DNA polymerase I n=117 Tax=Firmicutes RepID=DPO1_BACCA Length = 877 Score = 940 bits (2430), Expect = 0.0, Method: Composition-based stats. Identities = 357/928 (38%), Positives = 522/928 (56%), Gaps = 59/928 (6%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 + L+L+DGSS YRA+ A P L N G T A+YG ML ++ + +PTH V FDA Sbjct: 2 KKKLVLIDGSSVAYRAFFALPLLHNDKGIHTNAVYGFTMMLNKILAEEEPTHMLVAFDAG 61 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 TFR E F+ YK R P +L Q L +++A +P + EADD+IGTLA A Sbjct: 62 KTTFRHEAFQEYKGGRQQTPPELSEQFPLLRELLRAYRIPAYELENYEADDIIGTLAARA 121 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI----LGPEEVVNKYGVPPELIIDFLA 181 E+ G V + +GD+D+ QL +P++T+ T PE V KYG+ PE I+D Sbjct: 122 EQEGFEVKVISGDRDLTQLASPHVTVDITKKGITDIEPYTPEAVREKYGLTPEQIVDLKG 181 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGD SDNIPGVPG+GEKTA LL+ G ++ + A ++I G + + L Q++E Sbjct: 182 LMGDKSDNIPGVPGIGEKTAVKLLRQFGTVENVLASIDEIKG------EKLKETLRQHRE 235 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 +A LS +LA I+ D +EL+ + + Q E+++ LFK+ F+ + +E+ Sbjct: 236 MALLSKKLAAIRRDAPVELSLDDIAYQGEDREKVVALFKELGFQSFLEKMES-------- 287 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 S +E P D + EE L A A E Sbjct: 288 ---------PSSEEEKPLAKMAFTLADR----VTEEML---------ADKAALVVEVVEE 325 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 + A +VG++ E G P A L DE K + Sbjct: 326 NYHDAPIVGIAVVNEHGRFFLRP------------ETALADPQFVAWLGDETKKKSMFDS 373 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 K L GIEL G++FD +L +Y+L+ G D+ + A+ E + GKG Sbjct: 374 KRAAVALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVAAAAKMKQYEAVRPDEAVYGKGA 433 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 + ++ L + A L +L++++ + +E PL +L+ +E Sbjct: 434 KRAVPDEPVL---AEHLVRKAAAIWALERPFLDELRRNE-QDRLLVELEQPLSSILAEME 489 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 GVK+D K L EEL +L +E++ +E+AG+EFN++S KQL ILFEK + LKK Sbjct: 490 FAGVKVDTKRLEQMGEELAEQLRTVEQRIYELAGQEFNINSPKQLGVILFEKLQLPVLKK 549 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILE-YRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 + G STS +VLE+LA + + + IL+ YR L KL+STY + L ++ P T +VHT ++ Sbjct: 550 SKTGY-STSADVLEKLAPYHEIVENILQHYRQLGKLQSTYIEGLLKVVRPDTKKVHTIFN 608 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE-DYVIVSADYSQIELRIMAHLSR 719 QA+T TGRLSST+PNLQNIP+R EEGR+IRQAF+ E D++I +ADYSQIELR++AH++ Sbjct: 609 QALTQTGRLSSTEPNLQNIPIRLEEGRKIRQAFVPSESDWLIFAADYSQIELRVLAHIAE 668 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 D L+ AF DIH TA ++F + + VT RR AKA+NFG++YG+S +GLA+ LNI Sbjct: 669 DDNLMEAFRRDLDIHTKTAMDIFQVSEDEVTPNMRRQAKAVNFGIVYGISDYGLAQNLNI 728 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 RKEA ++++ YFE +PGV YME +AK++GYV TL RR YLPDI S N R+ A Sbjct: 729 SRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFA 788 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 ER A+N P+QG+AADIIK+AMI ++A L+ E+ + R+++QVHDEL+ E K++++ + + Sbjct: 789 ERMAMNTPIQGSAADIIKKAMIDLNARLKEERLQARLLLQVHDELILEAPKEEMERLCRL 848 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWDQA 927 + ++ME L VPL V+ G W A Sbjct: 849 VPEVMEQAVTLRVPLKVDYHYGSTWYDA 876 >UniRef50_B6YQQ9 DNA polymerase I n=13 Tax=Bacteroidales RepID=B6YQQ9_AZOPC Length = 928 Score = 939 bits (2428), Expect = 0.0, Method: Composition-based stats. Identities = 376/943 (39%), Positives = 547/943 (58%), Gaps = 38/943 (4%) Query: 8 PLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 L L+D + +YRAY++F PL NS G T A++G +N L +++ + PTH V FD Sbjct: 2 KLFLLDAYALIYRAYYSFIKMPLINSKGFNTSAIFGFVNTLDNILRRENPTHIGVAFDPI 61 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 TFR ++F+ YK+ R P+ +R I + +V A +P+L VSG EADDVIGT+A++ Sbjct: 62 EPTFRHQVFKQYKAQREETPETIRLSIPIIKDIVSAYHIPILEVSGYEADDVIGTVAKKT 121 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYG-VPPELIIDFL 180 + + T DKD QLV +I + ILG +E+ KYG + P +IDFL Sbjct: 122 S-RDYEIFMMTPDKDYGQLVDEHIFIYKPRYRKDGFEILGVKEIKEKYGFISPIQMIDFL 180 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 LMGDSSDNIPG PG+GE TA+ L+ G ++ L + G+ + K+E+NK Sbjct: 181 GLMGDSSDNIPGCPGIGEITAKKLIARFGSIENLLKNVHFLNGI-------LKTKIERNK 233 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 E S LATIKTDV + +L + L +F+K EF + + K Sbjct: 234 ETILFSKFLATIKTDVPINFNPNELIREDIDKPVLKKIFEKLEFHQLVSRFFGEKRSVLS 293 Query: 301 GAKPAAKPQ--ETSVADEAPEVTATVISY--------DNYVTILDEETLKAWIAKLEKAP 350 K + ++ E T TV+S Y I + + I K++ Sbjct: 294 IKKQFSSSLLFTDKFVEKNNEKTETVLSNFDNLSTVLHKYRVIDKQSDIGDLINKIKIQN 353 Query: 351 VFAFDTETDS---LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKP 407 F+F+ +T +D +SA LVG++F ++ G A ++P D + +L K Sbjct: 354 FFSFNIKTTEAIEIDPLSAELVGIAFTLQEGEAYFLPFFGRKRDIIPTV------QLFKE 407 Query: 408 LLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLK 467 + E + LKVGQNLKYD +L YGI + FD ++ Y++N H++D LA+ +L Sbjct: 408 IFESDTILKVGQNLKYDINVLKKYGIRMNYPIFDILIAHYLINP-EYLHNLDFLAKTYLN 466 Query: 468 HKTITFEEIAG-KGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVF 526 ++ I EE+ G K ++QL+ Q+ L YA E+AD+ L+L P ++K N+F Sbjct: 467 YRIINTEELIGSKKESQLSVRQVPLSLLADYACENADIVLKLKNIFEPIIRKS-NFSNLF 525 Query: 527 ENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQL 586 IE+PLV VLS +E GVK+D L ++S L L +EK +I+G+ FN++S K + Sbjct: 526 YRIELPLVFVLSDMEEFGVKLDISALKDYSVVLNRYLESIEKIIFQISGKIFNVNSPKMV 585 Query: 587 QTILFEKQGI-KPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLP 645 ILF+ I + KKT G +TSE +LE L +P+ IL+YR KL +TY D LP Sbjct: 586 GEILFDHLKIIENSKKTKSGQYATSEGILENLKKKHPIVGEILKYRKSKKLLTTYIDTLP 645 Query: 646 LMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSAD 705 +++ ++HT+Y+QA TATGRLSS PNLQNIP+R++EG+ IR+ FI ++ + +SAD Sbjct: 646 TLVSFIDKKIHTTYNQATTATGRLSSNSPNLQNIPIRDKEGKEIRRVFIPDDNCLFLSAD 705 Query: 706 YSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLI 765 YSQIELRIMAHLS DK +L AF G+DIH A A+ +FG+PL +T + RR AK NFG+I Sbjct: 706 YSQIELRIMAHLSEDKNMLEAFRNGQDIHSAIASIIFGVPLAEITCDMRRKAKITNFGII 765 Query: 766 YGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYL 825 YG+S FGLA QL + R A++ ++ YF +P + Y++R+ A A++ GYVET+ R+ +L Sbjct: 766 YGISVFGLAEQLQVSRFIAKELINKYFMIFPDIKNYIDRSIAIARKDGYVETIFRRKRFL 825 Query: 826 PDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELV 885 PDI S N R AER +INAP+QG+AADIIK AM + L + +MI+QVHDEL Sbjct: 826 PDINSRNSVVRKYAERNSINAPIQGSAADIIKVAMNRIHRRLIDNDLQSKMIIQVHDELN 885 Query: 886 FEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 F V D++D V + + ME+ T L VPL+V G G+NW +AH Sbjct: 886 FNVFIDELDKVKQIVVYEMEHATHLKVPLVVNCGIGKNWLEAH 928 >UniRef50_A7HJZ2 DNA polymerase I n=11 Tax=Bacteria RepID=A7HJZ2_FERNB Length = 898 Score = 937 bits (2422), Expect = 0.0, Method: Composition-based stats. Identities = 357/930 (38%), Positives = 534/930 (57%), Gaps = 56/930 (6%) Query: 8 PLILVDGSSYLYRAYHAF-PPLTNSAGEPTGAMYGVLNMLRSLIMQY---KPTHAAVVFD 63 + L DG+ LYRAY A LT ++G PT A+YG+ ML + ++ + A + D Sbjct: 3 RVFLFDGTGLLYRAYFAIDQSLTTTSGVPTNALYGLSRMLVKFLKEHVIINEDYCAFMLD 62 Query: 64 -AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 G T+R EL+ YK+HRP P+ L QI +++ G+ L+ V G EADDVI TLA Sbjct: 63 VKGGSTYRKELYADYKAHRPETPEPLLKQISLADELIEGFGIKLIKVPGYEADDVIATLA 122 Query: 123 REAEKAGR-----PVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPP 173 ++ EK + + I T DKDM QLV NI + E++ KYG+ Sbjct: 123 KKFEKEKQKYNISEINIITSDKDMLQLVNENIFVWRVEKGVTDLKKYTNNEIIEKYGITS 182 Query: 174 ELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMA 233 E I D+LAL+GD SDNIPGV G+GEKTA +L G ++ K+ + + Sbjct: 183 EQIKDYLALVGDVSDNIPGVSGIGEKTAAKILNEFGSVENALKNISKLP-------EKIR 235 Query: 234 AKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEA 293 +E N E LS +L + T+VE+++ E+L + ++LL + KK+EF ++ Sbjct: 236 NAIENNIEDFELSRKLVELNTNVEIKIDIEELLYKGYDQKKLLNVLKKFEFSSVIKEL-- 293 Query: 294 GKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFA 353 ++A + + Y I +E L + + K+ A Sbjct: 294 -------------------------NLSAELTNKVEYKVIENERALSDLLETIMKSKKIA 328 Query: 354 FDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEK 413 D ET SLD +VG+S A++ G A YIP+AH I E + L+ L K Sbjct: 329 LDLETTSLDPFEGKIVGISIAVDEGKAFYIPIAHVGA---KNIPIESVKKFLRDLFNSGK 385 Query: 414 ALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITF 473 + G N+K+D ++ GIE + +FD+M+E+Y+LN + ++D L+ + L HK I++ Sbjct: 386 TVG-GHNIKFDLKFISRLGIEPQIPSFDSMIEAYLLNPNEKKFNLDELSLKLLGHKMISY 444 Query: 474 EEIAGKGKN--QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEM 531 E++ F+ I ++ A +Y+ EDAD++L++H + P + ++ ++E IE+ Sbjct: 445 EDLVKDTIPLFAGDFSYIPVDTAVKYSCEDADMSLRIHNLLHPLIYSNE-MNELYEKIEL 503 Query: 532 PLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILF 591 P++ VL+ +E NGV D + L+N S+E+ +L L + EI GE FNL+S KQL ILF Sbjct: 504 PMILVLANLELNGVYFDIQYLNNLSQEMDKKLLALSNRIFEITGEAFNLNSPKQLGYILF 563 Query: 592 EKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPK 651 EK + +K T GA ST EVLE LA +Y + K+ILEYR + KLKSTY D +P M+N Sbjct: 564 EKLKLPSVKSTSTGAYSTDVEVLEYLANEYEIAKLILEYRKIQKLKSTYVDAIPNMVNKN 623 Query: 652 TGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIE 710 T RVH S++Q TATGRLSS+DPNLQN+P R++EG+ IR A + + I+ ADYSQIE Sbjct: 624 TKRVHASFNQTGTATGRLSSSDPNLQNLPGRSDEGKEIRMAVKPQKDGWYILGADYSQIE 683 Query: 711 LRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSA 770 LR++AH++ D L+ AF E KDIH TA ++FG+ E +T RR K +NF ++YG+S Sbjct: 684 LRVLAHITEDPNLINAFKENKDIHLETAKKLFGVSEEFITENMRRIGKMVNFAIVYGVSP 743 Query: 771 FGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKS 830 +GLA++ + K+ +K ++ Y + Y V EYM + AK+ GYV T+ GR+ +P I S Sbjct: 744 YGLAKRTGLDVKDTKKMIEAYLDYYKNVQEYMANIKEFAKKNGYVRTMFGRKRDIPQINS 803 Query: 831 SNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHK 890 + RA ER AIN P+QG+AADI+K AMI + L+ E+ + MI+QVHDELVFEV + Sbjct: 804 KDQNIRAEGERIAINTPIQGSAADIMKIAMIRIYERLKDEKLQSMMILQVHDELVFEVPE 863 Query: 891 DDVDAVAKQIHQLMENCTRLDVPLLVEVGS 920 ++V+ V K + + MEN +L VPLLV++ Sbjct: 864 NEVEYVKKLVKEEMENAVKLRVPLLVDIYV 893 >UniRef50_C6XHK7 DNA polymerase I n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XHK7_LIBAP Length = 976 Score = 936 bits (2420), Expect = 0.0, Method: Composition-based stats. Identities = 363/983 (36%), Positives = 553/983 (56%), Gaps = 72/983 (7%) Query: 5 PQNPLILVDGSSYLYRAYHAFPPLTNS-AGEPTGAMYGVLNMLRSLI----MQYKPTHAA 59 +N L LVDGSS++YRA++A P L+ G P A+ G NML L+ + +H A Sbjct: 3 KENHLFLVDGSSFIYRAFYATPLLSRKHDGLPVNAIAGFCNMLWKLLQNSRKESIASHFA 62 Query: 60 VVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIG 119 V+FD TFR+E++ YK++RP +P+ L Q+ + +A G+P + + G EADD+I Sbjct: 63 VIFDYPAVTFRNEIYPDYKANRPKIPEMLLPQLPLVRLATQAFGIPAIEIQGFEADDIIA 122 Query: 120 TLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDF 179 T AEK G V I + DKD+ QLV+P L +T+ + E V+ K+G+PPE ++ Sbjct: 123 TYTYIAEKEGFAVTIISTDKDLMQLVSPTTCLYDTVKEEKIDIEHVIKKWGIPPEKMVCL 182 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 AL GDS DNIPG+PG+G KTA LLQ G L+ + +I K + + Sbjct: 183 QALTGDSIDNIPGIPGIGYKTAALLLQEYGNLENILINASRIK------QKKRRENILEY 236 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 E A LS +L ++TDV + + E L ++ L+ K EF + V A Sbjct: 237 AETARLSRKLVMLRTDVPITIPLEHLILEDCNGPRLISFLKALEFTKLINRVATTYDCDA 296 Query: 300 KGAKPAA------------------------KPQETSVADEAPEVTAT------------ 323 +P Q +S++D+ ++ + Sbjct: 297 ANIEPVVLDINTTENKGIAIETEIDRDTTIKTSQFSSLSDQTSKINSEQTPQKLFLERLQ 356 Query: 324 -----VISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPG 378 I+ D+Y I++ + ++ W+ KLE +F TD++D + + ++ + Sbjct: 357 KLSQYPINNDSYTKIVNTKDIQQWVQKLETIGSASFKIITDTMDAFHSKPIAIAISTLDQ 416 Query: 379 --------VAAYIPVA-HDYLDAPDQISR-ERALELLKPLLEDEKALKVGQNLKYDRGIL 428 +I ++ H D+ + + + L LK E+E LK+G N+KYD+ +L Sbjct: 417 KDDTSFKVETIFIDLSVHTSQDSTGKNTLTKEILSYLKKFFENEHFLKIGHNIKYDKLVL 476 Query: 429 ANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQ 488 YGI +RG D ML SY+L+S HD+ S+A++WL + T +EI K+ + ++ Sbjct: 477 HRYGISMRGFE-DIMLMSYVLDSGRSSHDIASIAQKWLSY---TRKEILKSRKSSIPIDK 532 Query: 489 IALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKID 548 I+ + +A E+++V LQL L + P L K L+V+E ++ P++ V+S++E G++ID Sbjct: 533 ISDSQVQEHAIENSNVILQLWLLLRPKLIVEK-LLHVYERLDKPMIDVVSQMEITGIQID 591 Query: 549 PKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPS 608 +L S E++ L LE+ ++++GE+FNLSS KQL ILF K KT G Sbjct: 592 QDLLKQVSAEISKNLLSLEENIYDLSGEKFNLSSPKQLGDILFTKLKFPSGAKTKTGQWK 651 Query: 609 TSEEVLEELA-LDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATG 667 T+ + LE++ D P+ K ILE+R L+K+KSTY D LP IN +T RVHT Y A T TG Sbjct: 652 TTAQDLEQINCGDNPIIKNILEWRQLSKIKSTYADSLPNHINKRTQRVHTFYSLASTMTG 711 Query: 668 RLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAF 727 RL+S +PNLQNIP++ + G++IR+AFI+P ++SADYSQIELRI+AH+++ L F Sbjct: 712 RLASLEPNLQNIPIKTDLGQKIRRAFISPPTKKLISADYSQIELRILAHIAKITPLYQVF 771 Query: 728 AEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKY 787 DIHR AAE+FG+ +E V+ + RR AK INF +IYG+S F LA QL IPR EA Y Sbjct: 772 ENSLDIHRMVAAEIFGVNIEKVSPQMRRHAKTINFSIIYGISPFRLATQLRIPRSEAADY 831 Query: 788 MDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAP 847 + YF R+PG+ EY+E+T+ ++ GYVET+ GRR++ +I S + R ERAAINAP Sbjct: 832 IKRYFHRFPGIHEYIEKTKNFVRQNGYVETIFGRRIHYDEINSPKSSIRNINERAAINAP 891 Query: 848 MQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENC 907 +QG+AADI +RAMI+V L+ + +M++Q+HDELVFEV ++++ ++ I ME Sbjct: 892 IQGSAADITRRAMISVHKSLEDHKLATKMLLQIHDELVFEVPEEEITTASQIIVHSMEKA 951 Query: 908 ----TRLDVPLLVEVGSGENWDQ 926 L VPL V + NW + Sbjct: 952 CLPKINLRVPLKVNIKVSNNWQE 974 >UniRef50_A6FZM5 DNA polymerase I n=2 Tax=Deltaproteobacteria RepID=A6FZM5_9DELT Length = 898 Score = 935 bits (2417), Expect = 0.0, Method: Composition-based stats. Identities = 368/935 (39%), Positives = 527/935 (56%), Gaps = 50/935 (5%) Query: 5 PQNPLILVDGSSYLYRAYHAFP-PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 LIL+D SS +YRAY+A P + + G T A+YG M R ++ +P AVVFD Sbjct: 3 TPERLILIDASSLIYRAYYAIPANFSTADGLHTNAIYGFATMFRKILSGRQPERGAVVFD 62 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 A GKTFR+E + YK+ RP M +LR Q+ + +V+A P L V G EADD+IGTL R Sbjct: 63 APGKTFREEQYPEYKAQRPRMDPELREQLPWVDKLVEAHRFPHLRVPGYEADDIIGTLTR 122 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALM 183 +A AG V I +GDKD AQL+ P + +I+T+ + E V K+GVPP L ID+LAL+ Sbjct: 123 QAVDAGMEVYIISGDKDFAQLIGPTVRMIDTLRDVTFDAELVRKKWGVPPSLFIDYLALV 182 Query: 184 GDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVA 243 GD DNIPGVPG+G KTA+ LL G L+ + ++ G +LE N E A Sbjct: 183 GDKVDNIPGVPGIGPKTAKKLLDAYGDLEGVLTHTSELKG-------KQKERLEDNAEQA 235 Query: 244 YLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAK 303 +S +LATI T VELEL E L++ AA EL L+K+ EF ++ Sbjct: 236 RMSQKLATIDTQVELELGLEDLKLVPVAAAELNALYKRLEFYSLLSE------------- 282 Query: 304 PAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKL--EKAPVFAFDTETDSL 361 +E + A ++ + E L A +A L + A D+ Sbjct: 283 -----------EEVAKGEAKAQVGADFGAVTSLEQLDALLASLPGPEDGAVATMAIVDAP 331 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 + L GL+ ++ G +IP+ + E L L+P LED K K+G + Sbjct: 332 SAVRGELAGLALSVGAGHGRFIPLHCEGGLG------EAGLAKLRPWLEDPKRYKLGHDC 385 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAG-RHDMDSLAERWLKHKTITFEEIAGKG 480 K L G+ L GI DTM+ES+++ H +D L + +L+ + I G G Sbjct: 386 KASWVALRRKGVALAGIVGDTMIESFLVEPNKLIPHRLDQLTKEYLQRTIPPQKRILGSG 445 Query: 481 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI 540 K F+Q+ E + + +++ L G + E + +PL VL ++ Sbjct: 446 KRLKRFSQLDAEALAPWCCTQVEAVAAAFVEIRERLDAE-GHRDTLEQVSLPLSWVLGQM 504 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK 600 E +GV ID + L SEE RLA+LEK EIAG EFN++S+KQL +LF++ + +K Sbjct: 505 ELDGVAIDSEDLGKMSEEFGERLAKLEKTIFEIAGREFNIASSKQLGAVLFDELELPVIK 564 Query: 601 KTPGGAPSTSEEVLEELA-----LDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRV 655 +T G ST+ EVLE LA + + K +LE+R LAKL +TYTD L +NP +GR+ Sbjct: 565 RTKTGY-STNAEVLERLAGKTKHPKHTIAKYLLEHRKLAKLINTYTDVLQAAVNPDSGRI 623 Query: 656 HTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMA 715 H ++ Q +GRL +T+P+LQ P++ EG+R+RQAF+ Y ++SAD+SQIELR++A Sbjct: 624 HATFQQTAGVSGRLITTEPDLQRTPIKTPEGKRVRQAFVTRPGYKLISADWSQIELRLLA 683 Query: 716 HLSRDKGLLTAFAEGKDIHRATAAEVF--GLPLETVTSEQRRSAKAINFGLIYGMSAFGL 773 H S D L+ AFA+G D+H TAA++F G E V+ EQR K +NF IYG A L Sbjct: 684 HFSSDAHLVEAFAKGLDVHARTAAQLFEVGGGPEKVSREQRGVGKLVNFATIYGQGATAL 743 Query: 774 ARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNG 833 + L +PRK+AQ Y+D YF Y GV ++++ T AQA G+VETL GRR Y+P++ S+N Sbjct: 744 GQILKVPRKQAQAYIDGYFAYYSGVRDWLDGTMAQANVDGFVETLLGRRRYIPELSSNNW 803 Query: 834 ARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDV 893 R A ER A N P+QG+AADI K AM+ +D L+A++ RM++Q+HDELVFE +V Sbjct: 804 QDRQAGERIAANTPIQGSAADICKLAMLGIDRQLRAQKLTTRMLLQIHDELVFEAPVAEV 863 Query: 894 DAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 +AV + ME+ L VPL+V+VG G+ W +AH Sbjct: 864 EAVVAIVRGQMESVVELRVPLVVDVGVGDTWAEAH 898 >UniRef50_B1GZ14 DNA polymerase I n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZ14_UNCTG Length = 908 Score = 934 bits (2414), Expect = 0.0, Method: Composition-based stats. Identities = 346/922 (37%), Positives = 527/922 (57%), Gaps = 21/922 (2%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 ++DG++Y++RAYHA PPL+ S A+YG + +L + +KP + AV FD Sbjct: 2 KKFFIIDGNAYIHRAYHALPPLSTSNNRQVNAVYGFVKLLLKIKNSFKPDYMAVCFDYPS 61 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 K FR E+F+ YK++R P+ L +Q+ VKA+ + + + G EADD+I T+ + Sbjct: 62 KNFRHEIFKDYKANRKPLDKALISQMPIAREAVKALNVVGIEIKGYEADDLIATVTGNNK 121 Query: 127 KAGRPVLISTGDKDMAQLV-TPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185 +G +I TGDKD+ QL + + N + + ++V KYGV P+ + D ALMGD Sbjct: 122 GSGVQTVIVTGDKDILQLAEDETVLIWNYSKDIMYDTKKVEEKYGVAPKQLSDIFALMGD 181 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 +SDNIPG+ G+GEKTA L++ G L+ + + + G M L KE A L Sbjct: 182 ASDNIPGIKGIGEKTAVKLIEKFGNLENVLQNADSVKG-------NMGKLLSHGKEQALL 234 Query: 246 SYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPA 305 S +L + V L+ + E + A + + F+KYEFK A ++ + Sbjct: 235 SRKLIELNRRVPLDYKLGEFESKDIDAGKAVSFFEKYEFKSLLAK----YSVKEHELQFP 290 Query: 306 AKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNIS 365 ET +EA + + + +E K+E+A +FA T +LD++ Sbjct: 291 VILNETHRNEEAGSGSFVT-DKPVFEVVNSQERAAEVAEKIEQAGIFALKTVRSTLDSLK 349 Query: 366 ANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDR 425 +VG+S +E A Y P+ H+ L A Q+ E ++ PL +K K+G +LK +R Sbjct: 350 TRIVGISLCVE-NKAFYFPIGHNDLTAR-QVIFEDFKDIFAPLFFSDKIKKIGHDLKQER 407 Query: 426 GILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLT 485 I + G+ L I FD ML SY LN A H + +++ +L T A KG + + Sbjct: 408 NIYSMSGVGLNNIYFDIMLASYCLNP-AKSHCITDMSKEYLDF-TAGVGSYAWKGSKKSS 465 Query: 486 FNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGV 545 F ++E +YA + ++ + K K +F + EM LV +LS +E +G+ Sbjct: 466 FANSSIEAGAKYANSISAAVFAIYKIFDFQI-KEKKLSLLFFDTEMSLVEILSEMEISGI 524 Query: 546 KIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGG 605 K+D L N +E++ L +E ++IAG EFN++S KQL +++FEK + +KKT G Sbjct: 525 KVDLPFLRNFNEKIVYELKIIENNIYKIAGIEFNINSQKQLSSVMFEKLNLPVIKKTKTG 584 Query: 606 APSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTA 665 ST EEVL EL+ + P IL+YR L KLKSTY D L R+HT ++QAVT Sbjct: 585 Y-STDEEVLVELSS-HEFPAEILKYRELQKLKSTYIDPLTDYCVYYGSRIHTIFNQAVTT 642 Query: 666 TGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLT 725 TGRLSST+PNLQNIPV++ G+ R+AF+ + + +SADYSQI+LR++AH+S+D + Sbjct: 643 TGRLSSTEPNLQNIPVKSAYGKEFRKAFVPERNKIFISADYSQIDLRVLAHISQDTKFIE 702 Query: 726 AFAEGKDIHRATAAEVFGLPLE-TVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEA 784 AF G DIH ATA E+F +P +T R +AK+INFG+IYGMS FGL++QLNIP +A Sbjct: 703 AFKAGTDIHSATAREIFNIPEGYPLTDSLRSAAKSINFGIIYGMSPFGLSKQLNIPFGKA 762 Query: 785 QKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAI 844 ++Y+D YFERY V +ME+ QA E GYV T+ GR Y+P+++S+N R A ER A+ Sbjct: 763 KEYIDGYFERYDKVKFWMEQIVKQASEDGYVRTITGRIRYIPELRSTNAQVRKAGERMAL 822 Query: 845 NAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLM 904 N P+QG++ADIIK AMI+V ++ + + M++QVHD+L+FEV + + + I M Sbjct: 823 NTPVQGSSADIIKIAMISVYNEIKLKGYKSLMLLQVHDDLLFEVPDGESENMISIIKNKM 882 Query: 905 ENCTRLDVPLLVEVGSGENWDQ 926 EN L +P++V++ +G NW + Sbjct: 883 ENPLHLSIPIVVDIKAGRNWGE 904 >UniRef50_B1WPN5 DNA polymerase I n=13 Tax=Bacteria RepID=B1WPN5_CYAA5 Length = 970 Score = 931 bits (2407), Expect = 0.0, Method: Composition-based stats. Identities = 366/977 (37%), Positives = 530/977 (54%), Gaps = 75/977 (7%) Query: 9 LILVDGSSYLYRAYHAFP-----PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 L+L+DG S +RAY+AF PL S G PT +G LN L I P + A+ FD Sbjct: 10 LMLIDGHSLAFRAYYAFAKARKGPLRTSTGIPTSVCFGFLNSLIQAIKLENPQYIAIAFD 69 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 +K TFR E +YK+ R P+D I L +++A+ + ++ G EADDV+GT+A Sbjct: 70 SKEPTFRHEADVNYKADRKETPEDFIPDILNLQRLLEALNITIITAPGYEADDVLGTVAT 129 Query: 124 EAEKAGRPVLISTGDKDMAQLVTP--NITLINTMTN----------TILGPEEVVNKYGV 171 + + G V I +GD+D+ QLV +++++ N T E V K G+ Sbjct: 130 KGSQEGYRVKIVSGDRDLFQLVNDDNHLSVLYLERNAVKSSSGEGYTEFNVEAVTEKMGI 189 Query: 172 PPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKT 231 P +ID+ AL GD SDNIPGV G+GEKTA LL G L+ +Y E+I G + Sbjct: 190 KPTQVIDYKALCGDKSDNIPGVRGIGEKTAVKLLSEYGTLEAVYNNIEEIKGAN------ 243 Query: 232 MAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADV 291 KL++ K+ A S LA I TD LE E+ E++ + + + ++ E K++ ++ Sbjct: 244 -QKKLKEGKKEAEHSQYLAEIVTDAPLEFQIERCELKGFNFDAVKPILEELELKKFIKEI 302 Query: 292 EA-------GKWLQAKGAKPAAKPQETSVADEAPEV--------TATVISYDNYVTILDE 336 L+ + + S+ D+ PE T S N I + Sbjct: 303 NQLQEHFGGNITLEVHEKINKNETHQLSIFDDVPEKVEPVNNIKEETKESLINPQIITEI 362 Query: 337 ETLKAWIAKL----EKAPVFAFDTETDSLDNISANLVGLSFAIE--PGVAAYIPVAHDYL 390 E L + KL A+DTET L+ ANLVG+ P AYIP+ H Sbjct: 363 EQLHELVDKLSTFTNANIPVAWDTETTDLNPRQANLVGIGCCWGNNPTDIAYIPIGHK-- 420 Query: 391 DAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILN 450 Q+ +E+ L+ L+ +LE KV QN K+DR I + I L G+ FDTML SY+L+ Sbjct: 421 -QGKQLKKEQVLDSLRTILESSDYPKVFQNTKFDRLIFKHQAINLDGVVFDTMLASYVLH 479 Query: 451 SVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHL 510 H + L E++L+ T + G K Q T + +E+ Y DA T L Sbjct: 480 PEKS-HKLSELCEQYLEGITCQNYDELGISKKQ-TIADLDIEKVAEYCGMDAYGTFLLVE 537 Query: 511 KMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKA 570 + +LQ+ + +E PL VLS +E G+ ID + L S+EL L+ LEKKA Sbjct: 538 PLKNELQQVPTLEQLLLEVEQPLEAVLSIMEDTGILIDTEYLGKLSKELEQELSSLEKKA 597 Query: 571 HEIAGEEFNLSSTKQLQTILFEKQ--GIKPLKKTPGGAPSTSEEVLEELALDYPLPKVIL 628 ++ A E+FNL S KQL ILFEK K +KT G ST LE+L D+P+ IL Sbjct: 598 YDAAEEKFNLGSPKQLGEILFEKLELNRKKSRKTKTGY-STDHATLEKLKGDHPIIDYIL 656 Query: 629 EYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRR 688 EYR L+KLKSTY D LP ++N KT R+HT+++Q+VTATGRLSS++PNLQNIP+R E R+ Sbjct: 657 EYRTLSKLKSTYIDALPELVNKKTKRIHTNFNQSVTATGRLSSSNPNLQNIPIRTEFSRQ 716 Query: 689 IRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLET 748 IRQAFI +D+++VSADYSQIELRI+AHLS++ LL A+ +D+H TA +F E Sbjct: 717 IRQAFIPQKDWLLVSADYSQIELRILAHLSQESVLLNAYQNAEDVHTVTAKLLF--EKEE 774 Query: 749 VTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQ 808 +T ++R K INFG+IYGM + AR+ + E +++++ Y +RY V EY+E + + Sbjct: 775 ITPQERNLGKTINFGVIYGMGSQRFAREAGVSATEGKEFINKYRQRYAKVFEYLENMKKE 834 Query: 809 AKEQGYVETLDGRRLYLPDIKSSNGARR------------------AAAERAAINAPMQG 850 A GYV T+ GRR Y + R + RAA NAP+QG Sbjct: 835 AIANGYVTTILGRRRYFNFFDDNLYRFRGHDPQTIDLNKLNINYNDSQLLRAAANAPIQG 894 Query: 851 TAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRL 910 ++ADIIK AM+ + L Q +++QVHDELVFE+ + + + + +I + MEN +L Sbjct: 895 SSADIIKIAMVKIQEILNYYQAN--LLLQVHDELVFEIPEKEWEELNHKIKETMENAVKL 952 Query: 911 DVPLLVEVGSGENWDQA 927 +PL+VE+ +G+NW +A Sbjct: 953 TIPLVVEIHAGKNWMEA 969 >UniRef50_C9RNE9 DNA polymerase I n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RNE9_FIBSS Length = 972 Score = 930 bits (2404), Expect = 0.0, Method: Composition-based stats. Identities = 372/984 (37%), Positives = 546/984 (55%), Gaps = 71/984 (7%) Query: 4 IPQNPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 + + L+L+D + +R ++A+ PL NS GE M+G + ++ ++KPTH A+ Sbjct: 1 MAEKTLLLLDSFALAFRMFYAYSQNPLVNSKGEDVSMMHGYWGAVLRILAKHKPTHFAIA 60 Query: 62 FD-AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 D A KTFR EL+ YK++R PMP+++ AQ+ L ++A G+PLL+ G EADDV+ + Sbjct: 61 RDVAHTKTFRHELYPDYKANRGPMPEEMAAQMPLLCESMEASGIPLLSEPGYEADDVMAS 120 Query: 121 LAREAEKAG-RPVLISTGDKDMAQLVTPNITLINTMTN---TILGPEEVVNKYGVPPELI 176 A A AG V+I + DKDM+Q+VT I L + GP++V+ KYG+PPE I Sbjct: 121 AAEAAVNAGFDHVVIISKDKDMSQIVTDKIHLFHLEKGADGIDFGPQQVLEKYGIPPEKI 180 Query: 177 IDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKL 236 D+LALMGDSSDN+PGVP VG KTA LL G +D +YA + I K + L Sbjct: 181 RDYLALMGDSSDNVPGVPKVGPKTAIQLLTEYGDMDNIYANLDNIK------KKGLHDNL 234 Query: 237 EQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEA--- 293 NKE A+LS +L T++T + LE ++ L G+F+++E +E Sbjct: 235 ANNKEQAFLSRELVTLQTKRAYHGNLDALEFCGLHSDTLEGIFREHEINSLIRLLENVPS 294 Query: 294 --------GKWLQAKGAKPAAKPQETSVADEAPEVTATVISYD---NYVTILDEETLKAW 342 A G++ + S +V D Y+ + ++E + Sbjct: 295 KTGFVRKDDSDDSAAGSESNGTSDDASGDSSNSKVVKASFPADLPPTYICVDNDEVFEQM 354 Query: 343 IAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPG-----VAAYIPVAHD---YLDAPD 394 + ++A DTETD LD + N+VGL A YIP+ H P Sbjct: 355 KKEFDEATEIGIDTETDGLDPMQCNIVGLCLAAAAKDGSVPKGYYIPLGHTDDIGFPYPA 414 Query: 395 QISRERALELLKPLLEDE----------------------KALKVGQNLKYDRGILAN-Y 431 K D K V N K+D +LA + Sbjct: 415 GKGGNFDFNATKKWFIDFWNDSCTLPGDISDSGSKQPDSAKRSLVFHNAKFDLHVLARTF 474 Query: 432 GIELRGI----AFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFN 487 G+ + I DT++ +++L+ +D+ + L+H+ I E + G+GK Q+TFN Sbjct: 475 GLTQKQIDSANIIDTLIAAWMLSPGQTGLGLDNQVMQLLQHEMIPIENLIGRGKKQITFN 534 Query: 488 QIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKI 547 + +++A Y AEDA TL+L + LQK+ F EMPL+ VL ++E G + Sbjct: 535 RTPIKDATEYGAEDAVYTLRLWAPLRAKLQKYDYEKYFFSQ-EMPLLKVLYQMEGVGAFV 593 Query: 548 DPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAP 607 D K+L +L R+ +LEK+ ++AG EFN+ S KQL +LF+ G+ +K Sbjct: 594 DTKILKKLQTDLEHRIEKLEKEICDMAGCEFNIGSPKQLGEVLFDTLGLPEIK-----KR 648 Query: 608 STSEEVLEELALD--YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTA 665 ST VLEEL+ +P+ ++EYR L K++STY LP ++NP T R+HTS+ Q TA Sbjct: 649 STDAAVLEELSFRSAHPIVFAVIEYRELKKMQSTYVSVLPTLVNPDTKRIHTSFIQWGTA 708 Query: 666 TGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQIELRIMAHLSRDKGLL 724 TGRLSS DPNLQNIPVR++ G++IR AF+ + VI++ DYSQIELR++AHLS D+ L+ Sbjct: 709 TGRLSSRDPNLQNIPVRSDLGKQIRAAFVPQNPNNVILAVDYSQIELRMLAHLSGDEALI 768 Query: 725 TAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEA 784 ++ EG DIH TAA + + LE VT++ RR AK +NFG++YGM+AF L+R L IP +A Sbjct: 769 ESYKEGIDIHARTAAAINRVSLEDVTADMRRDAKVVNFGVLYGMTAFRLSRDLKIPMAQA 828 Query: 785 QKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAI 844 + ++D YFE Y GV ++++ T+A A GYVETL GRR Y+ I SS+ AER A+ Sbjct: 829 KSFIDGYFEMYQGVQKFIDDTKAAAHRDGYVETLSGRRRYIAGIDSSDRMESQMAERMAV 888 Query: 845 NAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLM 904 N P+QG+AAD+IK AMI + + E +RM++QVHDELVFE KD V+A++ + M Sbjct: 889 NTPVQGSAADLIKIAMIRIQKRINDENLPLRMMLQVHDELVFECPKDQVEALSAMVKSEM 948 Query: 905 ENCTRLDVPLLVEVGSGENWDQAH 928 E L VPL+ VG G+NW +AH Sbjct: 949 EGAMELKVPLVASVGFGKNWLEAH 972 >UniRef50_B8I3Y7 DNA polymerase I n=6 Tax=Clostridium RepID=B8I3Y7_CLOCE Length = 896 Score = 930 bits (2403), Expect = 0.0, Method: Composition-based stats. Identities = 343/933 (36%), Positives = 521/933 (55%), Gaps = 50/933 (5%) Query: 5 PQNPLILVDGSSYLYRAYHAFP---PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 ++ +++VDG+S L RA++ LT S G T A++G +N+L + P + V Sbjct: 3 SEDKILVVDGNSILNRAFYGLSRAAMLTTSEGLYTNAVFGFINILSKHLQDENPKYVCVA 62 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 FD K TFR + ++ YK+ R MP++L Q+ + ++ AM + + V G EADD++GT+ Sbjct: 63 FDLKAPTFRHKEYDQYKAQRKGMPNELAVQVPIIKQVLDAMNIARVEVEGFEADDILGTV 122 Query: 122 AREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN------TILGPEEVVNKYGVPPEL 175 + AEK G ++ TGD+D QL + + +T E+V+ KYGV P Sbjct: 123 SSYAEKQGMKTILLTGDRDSLQLASNYTRIKLPVTRANKTETDEYDYEKVIEKYGVTPGQ 182 Query: 176 IIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAK 235 +ID LMGD+SDNIPGVPG+GEKTA AL++ L+ LY +K+ K + K Sbjct: 183 LIDVKGLMGDTSDNIPGVPGIGEKTALALIKKFNSLEELYENIDKV------DKKGVREK 236 Query: 236 LEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGK 295 LE NKE+A++ +LATI V + E+L +FK+ EFK Sbjct: 237 LENNKELAFMCKRLATIYRKVPGVENLNDFARLEIDKEKLYSIFKRLEFKTLIEKFGL-- 294 Query: 296 WLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFD 355 + P V AT +V + L+++I+ ++ + + + Sbjct: 295 -------------------ENTPFVEATEALKIEHVDVDSISELQSYISVIKLSGMVSVY 335 Query: 356 TETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKAL 415 D + +L + E A I ++++ E + L+ + E + Sbjct: 336 YHVDPAGSYLDDLCIFACNEEYAPANII--------FSEKLTCETVVNELREIFESKDIE 387 Query: 416 KVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEE 475 K G +LK L ++GIEL + FDT + +YIL + + L+E LK E Sbjct: 388 KYGHDLKNLYKYLKSHGIELENVIFDTFIAAYILEPTRSTYTISELSEDKLKQSITPVEI 447 Query: 476 IAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVP 535 + K +L Q + A + L K+ P + + G ++ IE+PLV Sbjct: 448 LYDKHGKRLEQGQDV--SSSEVCAAAVNAIYGLTQKLRP-IIRDNGQDELYYKIELPLVE 504 Query: 536 VLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG 595 VL+ +E G K+D + L +S+EL RL LE + + AGE FN++S KQL ILFEK G Sbjct: 505 VLANMELRGFKVDVENLKAYSKELDSRLVILENEIYMQAGETFNINSPKQLGVILFEKLG 564 Query: 596 IKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRV 655 + KKT G STS EVLE+L+ + + + ILEYR L KLKSTY D L L + + G++ Sbjct: 565 LPVGKKTKTGY-STSAEVLEQLSYKHEIVERILEYRQLMKLKSTYADGL-LSVLEQDGKI 622 Query: 656 HTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIELRIM 714 H++++Q VTATGR+SST+PNLQNIPV+ E GR+IR+ FI DYV++ ADYSQIELR++ Sbjct: 623 HSNFNQTVTATGRISSTEPNLQNIPVKLEMGRKIRKVFIPTNSDYVLLDADYSQIELRVL 682 Query: 715 AHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLA 774 AH++ D ++ AF +DIH TA++VFG+P E V+S R AKA+NFG++YG+ F L+ Sbjct: 683 AHITGDPNMIEAFINNEDIHTTTASKVFGIPPEEVSSLMRSRAKAVNFGIVYGIGDFSLS 742 Query: 775 RQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGA 834 + + + +KEA+KY+D Y ++Y V EYM T + KE G+V TL RR YLP++KSSN Sbjct: 743 KDIGVTKKEARKYIDDYLDKYSKVKEYMSDTVEKGKEFGFVTTLYNRRRYLPELKSSNFN 802 Query: 835 RRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVD 894 R+ ER A+N P+QG+AADIIK +M+ V L+ + + ++I+QVHDEL+ E K +++ Sbjct: 803 MRSFGERVAMNTPIQGSAADIIKISMVKVYTELKKRKLKSKLILQVHDELIVETEKSELE 862 Query: 895 AVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 V+K + MEN +L VPL V+V G++W Sbjct: 863 EVSKLLKDCMENAVQLKVPLTVDVKHGDSWYDT 895 >UniRef50_B0KAJ0 DNA polymerase I n=12 Tax=Thermoanaerobacterales RepID=B0KAJ0_THEP3 Length = 872 Score = 928 bits (2398), Expect = 0.0, Method: Composition-based stats. Identities = 353/926 (38%), Positives = 528/926 (57%), Gaps = 61/926 (6%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 + +++DGSS +YRAY+A P LT S G T A+YG ML LI + KP + A+ FD K Sbjct: 2 SKFLVIDGSSLMYRAYYALPMLTTSEGLHTNALYGFTMMLIKLIEEEKPDYIAIAFDKKA 61 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 TFR + ++ YK+ R MP++L Q++ L +++ + +L + G EADD+IGT+++ AE Sbjct: 62 PTFRHKEYQDYKATRQAMPEELAEQVDLLKEIIEGFNIKILELEGYEADDIIGTISKLAE 121 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNTI----LGPEEVVNKYGVPPELIIDFLAL 182 + VL+ TGD+D QLV+ + + + + V+ +Y + P ID L Sbjct: 122 EKEMEVLVVTGDRDALQLVSDKVKVKISKKGITQMEEFDEKAVLERYEITPHQFIDLKGL 181 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 MGD SDNIPG+P +GEKTA LL+ G ++ L ++ G + +E NKE+ Sbjct: 182 MGDKSDNIPGIPNIGEKTAIKLLKDFGTIENLLQNLSQLKG-------KIKENIENNKEL 234 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A +S +LATIK D+ +E+ E+ V+ E+LL LF K EF Sbjct: 235 AIMSKKLATIKRDIPIEIDFEEYRVKDFNEEKLLELFNKLEFFSLI-------------- 280 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 D + I ++ V + +K IA L+ + AF Sbjct: 281 ------------DSIKKKNNVEIVNNHKVQKWSKVDIKKLIALLQDSKSIAFY-----PL 323 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 + ++F+ YI ++ LK + E EK +K Sbjct: 324 IYEGEIKKIAFSFG-NDTVYID--------------GFQIKDLKEIFEKEKFEFTTHEIK 368 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 L+ GIE + DT + +Y+LN +D+D + +++LK ++EE+ GKG++ Sbjct: 369 DFLVKLSYKGIECKSKYMDTAIMAYLLNPSESNYDLDRVLKKYLKVDVPSYEEVFGKGRD 428 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 + +I + Y L K+ +++ + IEMPLV VL +E Sbjct: 429 KKKLEEIGEDILADYICSRCVHLFDLREKLMNFIEEMD-MKRLLLEIEMPLVEVLKSMEV 487 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 +G +D +VL S+++ R+AE+ K ++ AG +FN++S KQL LFEK + +KKT Sbjct: 488 SGFTLDKEVLKELSQKINDRIAEILDKIYKEAGYQFNVNSPKQLSEFLFEKLNLPVIKKT 547 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST EVLE+L + I+EYR L KLKSTY + +++ + RVH+++ Q Sbjct: 548 KTGY-STDSEVLEQLVPYNNIVNDIIEYRQLTKLKSTYINGFLPLMD-ENNRVHSNFKQM 605 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQIELRIMAHLSRDK 721 VT+TGR+SST+PNLQNIP+R E GR+IR+AFI +D IVSADYSQIELR++AH+S D+ Sbjct: 606 VTSTGRISSTEPNLQNIPIREEFGRQIRRAFIPRTKDGYIVSADYSQIELRVLAHVSGDE 665 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 L+ +F +DIH TA+EVF +P+E VT E RR+AKA+NFG+IYG+S +GL+R L I R Sbjct: 666 KLIESFMNNEDIHLRTASEVFKVPMEKVTPEMRRAAKAVNFGIIYGISDYGLSRDLKISR 725 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 KEA++Y++ YFERY GV EY+E+ AKE GYV T+ RR Y+P+I S N +R+ AER Sbjct: 726 KEAKEYINNYFERYKGVKEYIEKIVRFAKENGYVITIMNRRRYIPEINSRNFTQRSQAER 785 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 A+NAP+QG+AADIIK AM+ V L+ + + ++I+QVHDELV + +KD+V+ V K + Sbjct: 786 LAMNAPIQGSAADIIKMAMVRVYNDLEKLKLKSKLILQVHDELVVDTYKDEVEIVKKILK 845 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQA 927 MEN +L VPL+VE+G G NW A Sbjct: 846 DNMENVVQLKVPLVVEIGVGPNWFLA 871 >UniRef50_Q1D7R1 DNA polymerase I n=4 Tax=Myxococcaceae RepID=Q1D7R1_MYXXD Length = 908 Score = 927 bits (2397), Expect = 0.0, Method: Composition-based stats. Identities = 358/928 (38%), Positives = 520/928 (56%), Gaps = 28/928 (3%) Query: 3 QIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 L+L+D S +++RAYHA PPLT S G T A+ G M+ + + KPTH A+ F Sbjct: 7 SRSAPTLVLIDASGFIFRAYHAIPPLTTSKGVQTNAVLGFTRMVLKALRELKPTHVALAF 66 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 D + +T R ++ YK++R P+DL Q + +V+A+ +P+L V+G EADDVIGTLA Sbjct: 67 DKESRTERQKIDPTYKANREGPPEDLVPQFALIRRVVEAINVPVLEVAGWEADDVIGTLA 126 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLAL 182 +A++ G V + TGDKD Q+V ++ L + M + P +V + G+ P + D+LAL Sbjct: 127 VKAKQEGFCVQVVTGDKDFVQIVDDDVRLYDPMKDVHTLPADVKARLGIEPGQMRDYLAL 186 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 +GD+ DN+P VPG+G KTA L+Q G ++TL + +++ + + ++E Sbjct: 187 IGDAVDNVPKVPGIGPKTATELIQQFGDVETLLSRLDEVK------KPKIRENIASHRES 240 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 + L T KTD+ L++ L + A+ LF + EF ++ + Sbjct: 241 LLRAKVLVTFKTDLSLDVRMADLARRPVDAQRSRELFTELEFFALLKELPQQDGV----- 295 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 A P E VT ++ D L + +A + Sbjct: 296 --AGAPDEVKEKPAPLAVTPRLVGADA--------ELAQLAGAVREAGAVTLIPAYEG-S 344 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 A LVGL A+ G AY+P+ H L Q+ E + +LED K G +LK Sbjct: 345 PFGAKLVGLGVALPDGQTAYVPLRHAQLGV-TQVRPEAFTAAFREVLEDAAVKKGGHDLK 403 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIA--GKG 480 +LAN GI L G D L SY+LN H + L+ L + A +G Sbjct: 404 ALSLVLANDGITLHGAHDDVELLSYLLNPSRREHALVDLSRERLNTELPPLPPAAEGKRG 463 Query: 481 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI 540 K +EE A A+ +L ++W +L+ K ++E+PL+P+L+++ Sbjct: 464 KKDRALADHTVEEVATGFAIRAEAARRLAPELWKELEAAKLAALA-RDMELPLLPLLAQM 522 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK 600 ER GV +D L S ++ + K+ + AG EFN+ S QL +LF + + +K Sbjct: 523 ERRGVLLDTAELSRTSVKVDAAVEAQVKEVYRHAGREFNIGSNPQLVEVLFTELKLPIIK 582 Query: 601 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 + G PS +EVLE+L+ ++PLP I+EYR L+KLKSTY D LP ++ GR+HT+YH Sbjct: 583 RGKTG-PSADQEVLEKLSEEHPLPGAIIEYRSLSKLKSTYLDTLPTLV-AADGRIHTTYH 640 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRD 720 QA TATGRLSSTDPNLQNIPVR + GR IR+AF+A E + +VSADYSQ+ELR++AH++ D Sbjct: 641 QAATATGRLSSTDPNLQNIPVRTDLGREIRRAFVAAEGHQLVSADYSQVELRLLAHIAND 700 Query: 721 KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 L+ AF +DIH TAAEVFG+ E V EQRR AK +NFG+ YG+S GL +L I Sbjct: 701 PVLIEAFLHDEDIHTRTAAEVFGVAKEQVDREQRRVAKMVNFGIAYGLSPHGLGARLGIA 760 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 + A+ ++ YF RY G+ Y+E T +A++ GYVETL GRR Y+ D+ S N AAE Sbjct: 761 QDVARDIIERYFTRYAGIRRYLEETVDRARKTGYVETLYGRRRYMADLNSKNRGVAQAAE 820 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 RAAIN P+QGTAAD+IK+AM+AVD L A++ R RM++QVHDEL+FE +V+ V Sbjct: 821 RAAINMPIQGTAADLIKKAMLAVDEALTAQKLRTRMLLQVHDELLFEAPDAEVEQVKALA 880 Query: 901 HQLMENCTRLDVPLLVEVGSGENWDQAH 928 + M + L VPL VEVG+G +W AH Sbjct: 881 VKAMSSVADLKVPLKVEVGAGRSWADAH 908 >UniRef50_Q02DA6 DNA polymerase I n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02DA6_SOLUE Length = 865 Score = 924 bits (2388), Expect = 0.0, Method: Composition-based stats. Identities = 358/938 (38%), Positives = 529/938 (56%), Gaps = 86/938 (9%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHA-----FPPLTNSAGEPTGAMYGVLNMLRSLIMQYKP 55 M + + L L+D +++RAYHA PP+ S G T A+Y NMLR L Q+ P Sbjct: 2 MGAVARQKLFLIDTFGFIFRAYHARARTGAPPMRTSTGFSTEAVYIFNNMLRKLSKQHDP 61 Query: 56 THAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115 + A +F++ T R + F YK++R P DL QI + +++AM +P+L G EAD Sbjct: 62 PYVAAIFESGEATHRVQEFAEYKANRTETPPDLLDQIPFVRRVLEAMRIPILEYPGFEAD 121 Query: 116 DVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN-TILGPEEVVNKYGVPPE 174 DVIGT+ R AE G V+I + DKDM QLVT +++++N + + PEEV GVPP Sbjct: 122 DVIGTITRRAEAEGLDVVIVSSDKDMLQLVTEHVSMLNPAKDDKLYNPEEVKTFMGVPPV 181 Query: 175 LIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAA 234 + D LALMGDS DNIPG PG+G+K A+ +L+ G ++ ++ K Sbjct: 182 QVADLLALMGDSVDNIPGAPGIGDKGAKQILEKFGSIEAALERAAEV------ERKVYRE 235 Query: 235 KLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAG 294 L+ N + +S +LATI TDV +E T + ++ Q P L ++K+ EF ++ Sbjct: 236 SLQNNVDRIRMSKRLATISTDVPIEFTLDAVKAQAPDPGLLKAIYKEMEFHSLLKELGPS 295 Query: 295 KWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAF 354 + + + Y I L+ W+A PV Sbjct: 296 EDTRER----------------------------RYSVIGSAGELREWLAGAAGTPVAVA 327 Query: 355 DTETD----SLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLE 410 T++ +LD I+A+ +GL+ ++ E +EL KP LE Sbjct: 328 ITKSTEGEFALDMIAADTIGLA---------------RKRGEACAVTSELIVEL-KPWLE 371 Query: 411 DEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKT 470 D +KV ++K LA GIE RG D M+ ++L++ G +++ A R L K Sbjct: 372 DAAVVKVACDVKSAVLQLARLGIEARGFGHDVMIYGFLLDADPGGCGLENQAHRRLDLKL 431 Query: 471 ITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIE 530 G A + AD+TL+L+ ++ P + +G +++ IE Sbjct: 432 ------------------------GGAAEQHADITLELYEQLAPAID-GRGLRKLYDEIE 466 Query: 531 MPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTIL 590 +PL VL+R+ER G++ID L S + +++ L + H +AG+ FN+SS +QL +L Sbjct: 467 LPLTRVLARMERTGIRIDGAELKRLSVLMESQISGLTAEIHALAGKPFNISSPQQLGKVL 526 Query: 591 FEKQGIK-PLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMIN 649 FE + P+K G ST+ +VL+ELA ++ + + +LEYR L KLK TY D LP +I+ Sbjct: 527 FEDLNLPAPVKYGKGKTISTAADVLDELAAEHEIVRKVLEYRQLTKLKGTYVDALPALID 586 Query: 650 PKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQI 709 P TGR+HTS++Q ATGRLSS++PNLQNIP+R GR IR AF+ + + ++ ADYSQI Sbjct: 587 PATGRLHTSFNQTGAATGRLSSSNPNLQNIPIRTSLGREIRAAFVPRDGWKLLVADYSQI 646 Query: 710 ELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMS 769 ELR++AH+S D+ L+ AF EG+DIH TAAEV G+P VT E RR AKA+NFG++YG+S Sbjct: 647 ELRLLAHMSGDELLVQAFREGEDIHTRTAAEVMGVPPLMVTPEARRDAKAVNFGIVYGIS 706 Query: 770 AFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIK 829 AFGLA QL I R EA++Y+ YF RY GV ++E T A+ ++ G +TL GR +P+I Sbjct: 707 AFGLAAQLGIGRAEAERYIKNYFARYVGVKRFIEETIAEVRKTGVTKTLFGRERPIPEIN 766 Query: 830 SSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVH 889 N R AER A+N+P+QGTAAD+IK AM+ +DA L A + M++QVHDELVFE Sbjct: 767 GRNPNARGFAERTAVNSPLQGTAADLIKLAMVRIDAALAAGGFQAAMLLQVHDELVFECP 826 Query: 890 KDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 +++D V++ + + ME L VPL+V+VGSG+NW A Sbjct: 827 PEELDEVSRMVKREMEGACELKVPLVVDVGSGDNWRDA 864 >UniRef50_A6NVK8 DNA polymerase I n=2 Tax=Bacteria RepID=A6NVK8_9BACE Length = 889 Score = 922 bits (2382), Expect = 0.0, Method: Composition-based stats. Identities = 342/926 (36%), Positives = 509/926 (54%), Gaps = 46/926 (4%) Query: 8 PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 L+++DG+S + RA++ LT G+PT A+YG L +L+ L+ + KP FD K Sbjct: 2 KLMVIDGNSIVNRAFYGVHMLTTRDGQPTNAVYGFLTILQKLVDEEKPDALCCTFDRKAP 61 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 TFR +E YK+ R MPD+L +Q+ L ++ AM +P + G EADD+IGT++ + Sbjct: 62 TFRHLAYEGYKAQRKGMPDELASQMPILKEVLDAMNIPRYEMDGWEADDLIGTISVKDAA 121 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTN------TILGPEEVVNKYGVPPELIIDFLA 181 AG ++ TGDKD QLVT + T + P+ YG P IID A Sbjct: 122 AGWDTVVVTGDKDSLQLVTDRTRVKLVSTRMGQTTTKEMTPDTFRETYGFDPIHIIDLKA 181 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGD+SDNIPGV GVGEKTA L+Q ++ +YA+ +K+ + KL + +E Sbjct: 182 LMGDASDNIPGVKGVGEKTAMDLIQRYQSVEAIYADLDKV-----EAKPAVLKKLTEGRE 236 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 A +SY LATI+TD L+ E ++ EL LF K EF + + Sbjct: 237 QAMMSYDLATIRTDAPLDFKPEDAARKEVNQAELYQLFLKLEFSKLIDKMGL-------- 288 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 A E + E VT T S + EE L W + + +L Sbjct: 289 ---KAPQGEAAAVTEEQAVTGTCESEEVTDLTRAEELLAIWRGQES--------VDVLAL 337 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 +++A V + AA + + + + L K ++ Sbjct: 338 PDLNAVAVEWWESESRSRAAVL-----------RADKLEGYNGVLKALFAADIKKNTHDV 386 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 K L G+E G FDT + +Y+L G ++++ L + + ++ Sbjct: 387 KTLLSRLLEEGVEGDGFVFDTAIAAYLLAPTDGSYELEKLGITYFNQEFAKAKDTY-LAP 445 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 + + G + A + L + P L++ G ++ +IE+PL VLS +E Sbjct: 446 DAFSPLADQTAVLGGMLSHCA-LIGALKKVLAPRLEEL-GMHQLYYDIELPLCQVLSAME 503 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 G+ +D K L + L R+A + + +E+AGE FN++ST+QL ILF+K G+ P+KK Sbjct: 504 HAGMLVDRKALSEFGDMLDERIAADQAEIYELAGETFNINSTQQLGKILFDKLGLPPVKK 563 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 T G ST+ EVLE+L +P+ ILEYR KLKSTY D L +I P GR+HTS+ Sbjct: 564 TKTGY-STNAEVLEKLRGQHPIIDKILEYRQYTKLKSTYVDGLGKVIAP-DGRIHTSFQN 621 Query: 662 AVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDK 721 VTATGRLSST+PNLQNIPVR E G +R+ F+AP V+V ADYSQIELR++AH++ D+ Sbjct: 622 TVTATGRLSSTEPNLQNIPVRTELGAELRKMFVAPAGKVLVDADYSQIELRLLAHIAGDE 681 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 ++ AF G+DIH TAA+VFG+P++ VT R SAKA+NFG++YG+SAF L++ + +P Sbjct: 682 HMIEAFRTGEDIHTVTAAQVFGVPVDQVTKHMRSSAKAVNFGIVYGISAFSLSQDIGVPT 741 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 EA++Y++ YF R+ GV YM +AK GYV TL GRR +LP++KSSN R+ ER Sbjct: 742 YEAKEYIEKYFARFSGVHAYMTDVVNRAKTDGYVSTLFGRRRWLPELKSSNFNTRSFGER 801 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 A+N P+QGTAADI+K AM+ V + L+ E + R+I+QVHDEL+ E +++ + V + Sbjct: 802 VALNMPIQGTAADIMKLAMLHVHSRLREEGLQARLILQVHDELIVECPEEEAETVKALLS 861 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQA 927 + ME+ +L VPL+ + +G +W +A Sbjct: 862 REMESVAQLAVPLIADAAAGRSWAEA 887 >UniRef50_A9BEU8 DNA polymerase I n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEU8_PETMO Length = 896 Score = 921 bits (2381), Expect = 0.0, Method: Composition-based stats. Identities = 362/926 (39%), Positives = 524/926 (56%), Gaps = 45/926 (4%) Query: 9 LILVDGSSYLYRAYHAFPP-LTNSAGEPTGAMYGVLNMLRSLIMQY---KPTHAAVVFDA 64 L L+DGS YRA+ A ++ S G PT A+YGV ML L+ +Y V D Sbjct: 4 LYLIDGSGIAYRAFFALGDWMSTSDGLPTNAIYGVARMLLKLLKEYVKKGEDSIIFVMDK 63 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 K T+R EL E YK+ RP P+ QI ++ MV+ +G+ L+A+ EADDVI T+ + Sbjct: 64 KTTTYRHELLESYKAQRPETPEKYIQQIPYIYEMVEKLGIKLVAMDNYEADDVIATIVSK 123 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFL 180 ++ V I T DKDM QLV N+ ++ ++V K GVPPE I D L Sbjct: 124 KKRNYDNVYIITSDKDMMQLVKDNVYILRPEQGITEMVKYDAQQVEKKMGVPPEKIADLL 183 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 ALMGDSSDNIPGV G+G KTAQ LLQ +D LY ++I G + KL+ K Sbjct: 184 ALMGDSSDNIPGVKGIGIKTAQKLLQDYDNIDDLYQHLDEIKGST-------KNKLKNEK 236 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEV-QQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 E AYLS +L + D +E E E+ Q L KK +F +++ Sbjct: 237 ETAYLSKKLVQLMVDAPIEEIFEDKEIIYQGFRNNLRDFLKKLDFNSILKELDM------ 290 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 P T VA E + Y + + K + LEK + +FD ET Sbjct: 291 ----PDTTTNSTKVAAETKAEKKDYSTKGKYYE-YNAQDYKELLKILEKYEIISFDLETS 345 Query: 360 SLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQ 419 SLD A++VG++ + +P ++ + + R + + LL ++K +GQ Sbjct: 346 SLDPYQADIVGIALSCKPFEGYFLYLYKEK-------DRWEITKEIVDLLNNKKV--IGQ 396 Query: 420 NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 NLKYD +L GIEL + FD+M+ +Y+LN + R +MD LA+ +L +KTI ++E+ GK Sbjct: 397 NLKYDITVLKVNGIELSKVHFDSMIAAYLLNPDSRRFNMDDLAKEYLDYKTIKYKEVMGK 456 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 LT I + YA EDAD+ +L + P L++ + E IEM + VLS Sbjct: 457 DIKLLTLGDIDKKRVVEYAGEDADIAYRLFEVLKPKLEEFELFELF-EKIEMSTINVLSE 515 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 +E NGV D K L EE +L+ L + +I G +FN +S KQ+ +LFE G+K Sbjct: 516 MEMNGVYFDLKELQKLEEEYNKKLSSLMYEMKKIVGYDFNPNSPKQVGELLFENLGLKGK 575 Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 +KT G+ ST + LE L ++P+ + +LEYR KL STY +P ++N KTGRVHTS+ Sbjct: 576 RKTKSGSYSTDADSLEALRDEHPIIEKLLEYRKYQKLLSTYIIAIPKLVNKKTGRVHTSF 635 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIELRIMAHLS 718 +Q TATGRLSS++PNLQN+P+R E+G RIR A +DYV++SADYSQIELR++AHL+ Sbjct: 636 NQTGTATGRLSSSEPNLQNLPIREEDGERIRSTVKAQKDDYVLLSADYSQIELRVLAHLT 695 Query: 719 RDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLN 778 D+ L+ AF G+DIH TAA +FG+ ++ V RR K +NF L+YG S +GLA L Sbjct: 696 NDETLINAFNNGEDIHALTAAAIFGVKIDDVDYNMRRVGKVVNFSLVYGSSPYGLAENLK 755 Query: 779 IPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAA 838 IP ++A+ +M+ YF+ Y V EY E + A ++GYVET+ GR+ +L +IK+ ++ Sbjct: 756 IPVEDAKDFMNRYFKTYQKVKEYQESSLKIATQKGYVETIFGRKRFLKNIKTG----KSE 811 Query: 839 AERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAK 898 +R IN P+QG+AADI+K AMI + L E ++I+QVHDE+V E+ + V+ K Sbjct: 812 LKRIVINTPIQGSAADIMKLAMINLYKKLPKE---AKLILQVHDEVVIELPEKIVEETKK 868 Query: 899 QIHQLMENCTRLDVPLLVEVGSGENW 924 + MEN +L++PL V++ G+NW Sbjct: 869 MVQDCMENAVKLNIPLKVDISVGKNW 894 >UniRef50_C4Z0G0 DNA polymerase I n=23 Tax=Bacteria RepID=C4Z0G0_EUBE2 Length = 894 Score = 920 bits (2378), Expect = 0.0, Method: Composition-based stats. Identities = 357/935 (38%), Positives = 522/935 (55%), Gaps = 58/935 (6%) Query: 8 PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 LIL+DG S L RA++ P LTN+ G T AMYG LN+L + + KP + V FD Sbjct: 4 KLILIDGHSILNRAFYGVPDLTNAEGIHTNAMYGFLNILFKFLDEEKPDYITVAFDLSAP 63 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 TFR ++F+ YK R PM +L+ Q+ + ++KAM + ++ G EADD++GT+A+E+ Sbjct: 64 TFRHKVFDGYKGTRKPMQPELKQQVPLMKELLKAMNITVVEQEGYEADDILGTIAKESAA 123 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTNTILG------PEEVVNKYGVPPELIIDFLA 181 G V I +GD+D+ QL +I + T + P +V N YGV P ID A Sbjct: 124 KGIDVSIVSGDRDLLQLADEHIKIRIPKTKKGVTEVEDYYPSDVFNLYGVTPHEFIDVKA 183 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGD+SDNIPG PGVG KTA A++Q LD ++ ++ + +N E Sbjct: 184 LMGDTSDNIPGAPGVGPKTASAIIQKYHSLDNVFEHLCELK------PPKAKISITENVE 237 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 +S L+ IK DV ++ E + E LFKKY FK E Sbjct: 238 QIKMSRFLSEIKIDVPIDYKVEDSKAGDFFNENSYELFKKYNFKNMLKKFENTDI----- 292 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 + Y+ + I D ++ K A A E L Sbjct: 293 ------------------IAKDPECYEYFKKISDFADVENVFNK---AVDIAGGIEKIGL 331 Query: 362 DNISAN-LVGLSFAIEPGVAAYIPVAHDYLDA--PDQISRERALELLKPLLEDEKALKVG 418 + N L+ + + YIPV+ ++ D++S ++ + + Sbjct: 332 SIVRENELIAVGITLSDTEIYYIPVSGFVTESYLADRLSDVVSVASNRNIASA------- 384 Query: 419 QNLKYDRGILANYGIE-----LRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITF 473 N+K I I DT + +Y+L+ +D +SL +L + Sbjct: 385 -NIKDYLDIFEKDKINGYPLVSEKAFIDTAIAAYLLHPSNESYDYESLGREFLSLTYPSK 443 Query: 474 EEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPL 533 E+ GK N+ A + +YA + + K+ L K + +FE IEMPL Sbjct: 444 TELLGKLSINKAVNE-AEDNLIKYACLSSYAYYKCADKITEQL-KSENMYELFETIEMPL 501 Query: 534 VPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEK 593 + VL +++ G+ +D + L ++S+ L +++ LEK+ +E AGEEFN++S KQL ILFE+ Sbjct: 502 IFVLFEMQQQGISVDKQALVDYSKVLGTKISVLEKEIYEAAGEEFNINSPKQLGVILFER 561 Query: 594 QGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTG 653 G+ KKT G ST+ +VLE+LA DYP+ ILEYR LAKLKSTY D L I + G Sbjct: 562 LGMPNGKKTKSGY-STAADVLEKLAPDYPVVSKILEYRQLAKLKSTYADGLTQYI-SEDG 619 Query: 654 RVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRI 713 R+H +++Q +TATGR+SST+PNLQNIP+R E G+ IR+ F+ + +V + ADYSQIELRI Sbjct: 620 RIHGTFNQTITATGRISSTEPNLQNIPIRMEMGKAIRKVFVPKDGFVFLDADYSQIELRI 679 Query: 714 MAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGL 773 +AH+S D+ L+ A+ DIHRATAA+VFG+PLE VT EQRR+AKA+NFG+IYGMS+FGL Sbjct: 680 LAHMSGDEKLIEAYNSSADIHRATAAQVFGVPLEEVTDEQRRNAKAVNFGIIYGMSSFGL 739 Query: 774 ARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNG 833 ++ L+I RKEA++Y++ YF YP + +++ + AKE+GY T+ RR +P+IKSSN Sbjct: 740 SQDLSISRKEAKEYIERYFASYPTIKTFIDGLVSDAKEKGYSLTMYNRRREIPEIKSSNF 799 Query: 834 ARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDV 893 +R+ ER A+NAP+QGTAADIIK AMI V L+ R R+I+QVHDEL+ E +D+V Sbjct: 800 MQRSFGERVAMNAPIQGTAADIIKLAMINVYNALKEHNLRSRLILQVHDELLVETAEDEV 859 Query: 894 DAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 D V + + M+N L VPL V++ G++W +AH Sbjct: 860 DTVKQIMLDGMKNAVSLKVPLEVDLKEGKDWLEAH 894 >UniRef50_UPI0001C17162 DNA polymerase A n=2 Tax=Nostocaceae RepID=UPI0001C17162 Length = 988 Score = 919 bits (2376), Expect = 0.0, Method: Composition-based stats. Identities = 348/989 (35%), Positives = 512/989 (51%), Gaps = 80/989 (8%) Query: 7 NPLILVDGSSYLYRAYHAFPP-----LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 +ILVDG S +R+Y AF L +G PT +G + L +I++ +P AV Sbjct: 11 PTIILVDGHSLAFRSYFAFAKSRAGGLRTKSGIPTNVCFGFMQCLLDVIVKEQPQAIAVA 70 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 FD TFR E +YK++R P+D + L+ +++A+ + ++ G EADD++GTL Sbjct: 71 FDLAAPTFRHEADSNYKANRADTPEDFIPDLVNLYDLLEALNIQVITQPGYEADDILGTL 130 Query: 122 AREAEKAGRPVLISTGDKDMAQLVTPN--ITLINTMTN---------TILGPEEVVNKYG 170 A + +G V I +GD+D+ QL+ N I+++N +V K G Sbjct: 131 AETSVCSGYRVKILSGDRDLFQLIDENKGISVLNFTPEALKSSSNGIKEFHTLDVKEKLG 190 Query: 171 VPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAK 230 V P ++DF AL GD+SDNIPGV G+GEKTA LL L +YA KI G + Sbjct: 191 VLPTQVVDFKALCGDTSDNIPGVKGIGEKTAVKLLNIYKSLTEIYANINKITGAN----- 245 Query: 231 TMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTAD 290 KL +E A+ S LA I TDV + + + ++ +++ + +K EFK++ Sbjct: 246 --QQKLIAGQESAFHSQYLAKIVTDVPITIKIQDCHLKGFDTAKIIPILEKLEFKKFLDK 303 Query: 291 VEAGKWLQAKGAKPAAKPQET--------------------SVADEAPEVTATVISYDNY 330 ++ + + + +V + + S Sbjct: 304 IQEIEKKFIHSQSTSLTGETNNSNTNNLSLDDDLWFFSAADTVNAQKSQTLKQGSSEIKV 363 Query: 331 VTILDEETLKAWIAKLEKAP----VFAFDTETDSLDNISANLVGLSFAIEPGVA--AYIP 384 I E+ L+ + LE+ A+DTET LD +ANLVG+ G AYIP Sbjct: 364 RIIDTEDKLRELVNILEQHKDPENPVAWDTETTDLDPRNANLVGIGCCWGTGENDVAYIP 423 Query: 385 VAHDYL-DAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTM 443 + H+ + + L L+ +L K QN K+DR I GI L G+ FD M Sbjct: 424 LGHNITSNLEKNLPLNTVLSTLEKILVSGDYPKTFQNAKFDRLIFKYQGITLDGVVFDPM 483 Query: 444 LESYILNSVAGRHDMDSLAERWLKHKTITFEEIA---GKGKNQLTFNQIALEEAGRYAAE 500 L SY+LN H++ LA R+L + +++I GK + Q T I++ Y + Sbjct: 484 LASYVLNPDRT-HNLTDLALRYLGLQLTEYDDIVQKSGKKERQKTIADISIHTVANYCGK 542 Query: 501 DADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELT 560 T QL K+ +L + + ++E PL VL+ +E GV I+ L S+ + Sbjct: 543 QVYATWQLVGKLREELNEIPALFKLLVDVEQPLEVVLAEMEHRGVIINSAYLQQLSQHIE 602 Query: 561 LRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTP-GGAPSTSEEVLEELA- 618 LA LE KA +IAGE+FNL S KQL ILFEK G+ ST LE+L Sbjct: 603 SDLATLEIKATKIAGEKFNLGSPKQLSYILFEKLGLSTKYSRKISTGYSTDAATLEKLQE 662 Query: 619 -LDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQ 677 I+EYR LAKLKSTY D LP ++N KT R+HT+++Q TATGRLSS++PNLQ Sbjct: 663 VDQTGFVDAIIEYRTLAKLKSTYVDALPELVNHKTQRIHTNFNQTATATGRLSSSNPNLQ 722 Query: 678 NIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRAT 737 NIP+R R+IR+AF+ +++V+ADYSQIELRI+AHLS++ L+ A++ +DIH T Sbjct: 723 NIPIRTAFSRQIRKAFLPESGWLMVAADYSQIELRILAHLSQEPMLIQAYSNNQDIHTLT 782 Query: 738 AAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPG 797 A +F E VTSE+RR AK INFG+IYGM +R + + A +++ + +RYP Sbjct: 783 AKLLF--DKEDVTSEERRFAKTINFGVIYGMGVLKFSRSTGVDKNIANEFIQKFNQRYPL 840 Query: 798 VLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARR-------------------AA 838 V Y+E + QA QGYVET+ GRR Y + + A Sbjct: 841 VFTYLETIKKQAISQGYVETILGRRRYFDFTNKTLQQLKGKDLQEIELNKLKNLGPYDAG 900 Query: 839 AERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAK 898 R+A NAP+QG++ADIIK AM+ + L+ Q ++++QVHDELVFEV + D + Sbjct: 901 LLRSAANAPIQGSSADIIKIAMVRLHEVLRRYQ--AKLLLQVHDELVFEVPPSEWDELQL 958 Query: 899 QIHQLMENCTRLDVPLLVEVGSGENWDQA 927 QI +MEN +L VPL+V++ GENW + Sbjct: 959 QIKSVMENAMKLSVPLVVDIHVGENWMET 987 >UniRef50_A6G5W6 DNA polymerase I n=2 Tax=cellular organisms RepID=A6G5W6_9DELT Length = 933 Score = 919 bits (2376), Expect = 0.0, Method: Composition-based stats. Identities = 381/943 (40%), Positives = 536/943 (56%), Gaps = 36/943 (3%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG-K 67 + LVD +++L+RAYHA P LT G P A++G + M++++ ++ P H VFDA G K Sbjct: 1 MFLVDANNFLFRAYHALPMLTAPDGRPVNAVHGYVRMVQAIRKEFAPQHLLAVFDASGSK 60 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 +R EL+ YK++RPP P+DL+ QI + A+ +P L EADD+I + + Sbjct: 61 GWRRELYAEYKANRPPPPEDLQPQIPLVREATDALSIPWLEDPRYEADDLIARYVQAGVE 120 Query: 128 AGRPVLISTGDKDMAQLV-------TPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL 180 A V+I + DKD+ QLV ++ L +TM N +GP EVV K+GV PE + D L Sbjct: 121 AKLEVVIVSSDKDLMQLVAGPDDVREGSVRLWDTMKNRRVGPAEVVAKFGVGPEKLGDLL 180 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 AL GDSSDNIPGV G+G KTA +LL+ G L+ + + +KI K LE Sbjct: 181 ALAGDSSDNIPGVKGIGPKTATSLLETYGDLEGILSNTDKIK------QKKRRENLETYA 234 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFK-RWTADVEAGKWLQA 299 E A +S +L ++TD +L E + + P + F FK T V AG + Sbjct: 235 EDARMSRKLVALRTDYDLPRPIEDVADKGPKRATMEAFFTPLGFKATLTGAVRAGGGSRR 294 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 + + E V++ D TL A++A+ A AF+ E Sbjct: 295 VAPRTLVETIAKIKELEVDREAVEVLNADEAGV----ATLDAFLAQARAAEGLAFELELS 350 Query: 360 SLDNISANLVGLSFAIEPGVA----------AYIPVAHDYLDAP--DQISRERALELLKP 407 D + A+ +GL+ AI A Y+P+AH L Q L + P Sbjct: 351 GDDPLRADPIGLALAIPKAKAEAPGALERAPIYLPMAHRSLSDGAVQQWKPSEVLAKVGP 410 Query: 408 LLEDEKALKVGQNLKYDRGILAN--YGIELRGIAFDTMLESYILNSVAGRHDMDSLAERW 465 LL D K K LK + +L+ +E+R + DT+L SY L+ H+++ LA+ Sbjct: 411 LLSDAKLPKYTHALKDQQVVLSRADLNVEVRNVVGDTLLASYTLDPARSDHNLEGLAKDI 470 Query: 466 LKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKH-KGPLN 524 E I GKGK ++ F+Q+A+ AG +A E A + L M + + Sbjct: 471 GGRLVGDRESIVGKGKKRVGFDQVAVAVAGPWAGERAGLAATLGPHMVAAAKAAGEQTQK 530 Query: 525 VFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTK 584 ++ +E+PL VL+R+ER GV +D L ++EL ++ L+ E AG + +S K Sbjct: 531 LYAEVELPLARVLARLERRGVLLDEAELQRQNDELGGQIDALKSTLQEEAGYAVDPNSPK 590 Query: 585 QLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKL 644 QL +LFE++G+ KKT G ST + LEEL+L P+ KVIL+YR LAKLK+TY D L Sbjct: 591 QLGKLLFEERGLPAKKKTKTGY-STDAQTLEELSLLDPIVKVILDYRSLAKLKNTYLDTL 649 Query: 645 PLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSA 704 P ++NP TGR+HT + QAV ATGRLSS +PNLQNIP+R E+GRRIR+ F+APE +V+ Sbjct: 650 PKLVNPNTGRLHTHFRQAVAATGRLSSREPNLQNIPIRTEQGRRIRRGFVAPEGMQLVTL 709 Query: 705 DYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGL 764 DYSQIELR++AHLS+D L+ AF +G D+HR TAAEVF +P VTSEQRR AKA+NFG+ Sbjct: 710 DYSQIELRVLAHLSKDPNLVKAFTDGADVHRRTAAEVFEVPEAEVTSEQRRVAKAVNFGV 769 Query: 765 IYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLY 824 IYG SAFGLARQL IP+ A KY+ YF++ PGV YM AK+ G+ ET+ GRR Sbjct: 770 IYGQSAFGLARQLGIPQGRAGKYIKAYFKKIPGVSSYMNALIDTAKDTGFAETIFGRRRR 829 Query: 825 LPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDEL 884 +P+++ R+ ER A N P+QG+AADI+K AM+ V L ++P RM++ VHDEL Sbjct: 830 IPELRRRGAVARSYGERIARNTPIQGSAADILKIAMVEV-ERLLDDKPWARMLLTVHDEL 888 Query: 885 VFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 +FE D V + + ME LDVPLLVE G+G NW+ A Sbjct: 889 IFECETDKVQELIGLVKPAMEKSASLDVPLLVEGGAGANWEDA 931 >UniRef50_D2RIE4 DNA polymerase I n=5 Tax=Clostridiales RepID=D2RIE4_ACIFE Length = 872 Score = 919 bits (2375), Expect = 0.0, Method: Composition-based stats. Identities = 350/926 (37%), Positives = 506/926 (54%), Gaps = 64/926 (6%) Query: 8 PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 +L+DGSS ++RA+ A PPLTN G TGA+YG+ NM+ L+ + +P++ V FD K Sbjct: 4 KFLLIDGSSLIHRAFFALPPLTNKNGVNTGAVYGLCNMILKLLQEIQPSYMLVAFDKSRK 63 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 TFR E F YK R P +L+ Q ++++MG+P L V EADD+IGTL+ A + Sbjct: 64 TFRTEKFPEYKGQRKATPPELKEQFPLSIQLLQSMGIPTLEVDNYEADDIIGTLSSGAPE 123 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKY-GVPPELIIDFLAL 182 V I TGD+D QL+ N+ ++ T + + +Y G+ P IID L Sbjct: 124 -NVQVRIVTGDRDEFQLIKGNVQVLFTKKGISNIAVYDEKAFGEEYQGLQPRQIIDLKGL 182 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 MGD+SDNIPGVPGVG KTA L+ ++ + E++ G K + KL N+E Sbjct: 183 MGDTSDNIPGVPGVGPKTALKLITEYRTVENVLDHAEEVKG------KALKEKLRNNREQ 236 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A LS LATI V ++ + EE L ++ +FK L Sbjct: 237 ALLSKDLATICLQVPIDRDPGAYVLTG-LTEESRQLMQELQFKNLWDRF--VPVLGCAAG 293 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 A S+ + V A + + E L I K A+ + SL Sbjct: 294 TDAGSSDPLSLFGQP--VAAETLDTVEITSDAQGEALVEEIRARGKQVALAWQLKG-SLP 350 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 + + L+FA Y+ P+ +E L LL+D K + K Sbjct: 351 VLEMERLDLAFA-----------GKHYVFCPETAGKEAVL----SLLQDPAISKAAADPK 395 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 + G L+GI D L Y+ A + + +L E +L Sbjct: 396 ELYKYMMGQGKNLQGITDDPALAGYLYEPGASGYGIQALGEEFL---------------- 439 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 +G A + A + L K+ + +G ++E+IE+PL L+ +E Sbjct: 440 --------PAASGEGAQDTAALVPVLREKL-----EERGLTRLYEDIELPLTENLAEMEF 486 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 G+ +D +L + E+T ++ LE++A + AGE+FNL+S KQL +LFEK G+ +KKT Sbjct: 487 TGIAVDQAMLDEVTGEMTKKVQALEQQAWDQAGEQFNLNSPKQLGVLLFEKLGLPIIKKT 546 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST VLE L ++PL + ++ YR L+KL STY L +INP TGR+HT ++Q Sbjct: 547 KTGY-STDVSVLEALQGEHPLIETLISYRQLSKLLSTYLLGLHPLINPATGRIHTHFNQM 605 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY-VIVSADYSQIELRIMAHLSRDK 721 T TGRLSST+PNLQNIP R E G+R+R+ F+ E Y +++S DYSQ+ELR+MA +++D+ Sbjct: 606 ATVTGRLSSTEPNLQNIPTRTEVGKRMREMFVPGEGYDLLMSCDYSQVELRVMASIAQDE 665 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 LL +F G+D+H TA+E+FG+PL+ VT R AK +NFG+IYG+S FGLARQL +PR Sbjct: 666 LLLDSFRHGQDVHARTASEIFGVPLDQVTPYMRSKAKTVNFGIIYGISDFGLARQLGVPR 725 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 EA +Y++ YF RY GV YMER + +A+E GYVETL GRR YLPDI + N RR+ AER Sbjct: 726 GEAAQYIESYFARYTGVKAYMEREKQKAREMGYVETLFGRRRYLPDINAKNFNRRSFAER 785 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 AIN P+QGTAADIIK AM+ V L+ + + R+++QVHDELV E+ + + V K + Sbjct: 786 TAINTPIQGTAADIIKVAMLKVARNLKEARVKSRVLLQVHDELVLEIPAAEQETVGKIVK 845 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQA 927 + ME+ L VPL+ +V G+NW +A Sbjct: 846 ETMEHAVDLAVPLVADVAVGKNWARA 871 >UniRef50_A0PZF5 DNA polymerase I n=27 Tax=Clostridia RepID=A0PZF5_CLONN Length = 878 Score = 918 bits (2374), Expect = 0.0, Method: Composition-based stats. Identities = 329/930 (35%), Positives = 516/930 (55%), Gaps = 59/930 (6%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + + L+++DG S +YRA+ A PPLTN G T A+YG + ML + + KP + FD Sbjct: 1 MNKERLLILDGHSLMYRAFFALPPLTNKEGIHTNAIYGFIKMLLKMKEEIKPDYIVTTFD 60 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 K TFR + +E YK+ R MPD+L Q + ++ + + + + G EADD+IGTL++ Sbjct: 61 KKAPTFRHKEYEEYKAGRAKMPDELNEQFPIVKDILNKLAINIFEIEGFEADDLIGTLSK 120 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDF 179 AE+ G V I TGD+D QL T N+ ++ I +++ +YGV P ID Sbjct: 121 FAEEKGIEVYIVTGDRDALQLATDNVRVVINKKGMSEKEIYDKNKMIEEYGVTPTEFIDV 180 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 LMGD SDNIPGVPG+G KTA L++ G ++ + E I+G K M L Sbjct: 181 KGLMGDKSDNIPGVPGIGNKTALKLIKEYGSIENVLENVENISG------KKMKQNLIDY 234 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQ-PAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 +E A LS +LATI DV +E+ ++++ ++ + + LF+ FK ++ + L Sbjct: 235 REQAILSKKLATICKDVPIEINLDEIKSKEDYDIQGVRLLFQSLGFKSLLDNIGDNEGLD 294 Query: 299 AKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTET 358 K E V + + +T I+ E ++ ++ + D Sbjct: 295 --------KEDEAEVKESDINIKSTNIN--------TIENFSKFVEGIDDSIYIQADFV- 337 Query: 359 DSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVG 418 +NI + + + + ++ A++ D + E+LK L E+EK KV Sbjct: 338 --DENIYSKIEFNNLYVRHKEEVFVISANEIKDKDG----AKYFEILKNLFENEKIKKVC 391 Query: 419 QNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAG 478 + K +L + I + IAFDT + +Y+L + + L E L Sbjct: 392 HDSKKVYVVLKKHNIAAKNIAFDTKIAAYLLQPSKSDYMLKDLIEEML------------ 439 Query: 479 KGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLS 538 ++L++ + ++ K+ D++K + +E+PL+ VL+ Sbjct: 440 ---------LLSLKDDDNIKINETYYIKDVYEKLEKDIKKS-NMEELLYTVELPLIEVLA 489 Query: 539 RIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKP 598 +E G ++D L E+ + LEK+ HE+A EEFN+ S KQL ILFEK + Sbjct: 490 SMECEGFRVDENRLTEIGEKFKKEIETLEKEIHELADEEFNIKSPKQLGKILFEKLDLPV 549 Query: 599 LKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTS 658 +KKT G ST+ EVLE+L +P+ + I+EYR + KL STY + L +I+ + ++H+S Sbjct: 550 IKKTKTGY-STNAEVLEKLKDSHPIIEKIIEYRQITKLDSTYVEGLKNVID-EDAKIHSS 607 Query: 659 YHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPED-YVIVSADYSQIELRIMAHL 717 ++Q VT TGRLSST+PNLQNIP+++E GR IR+ F+ D VI SADYSQIELRI++H+ Sbjct: 608 FNQTVTTTGRLSSTEPNLQNIPIKHEMGREIRKVFVPNNDESVIFSADYSQIELRILSHI 667 Query: 718 SRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQL 777 + D+ L+ AF KDIH TA+EVF +P++ VT R +AKA+NFG++YG+ AF L++ + Sbjct: 668 ADDEKLIDAFKHHKDIHTITASEVFKVPIDEVTPLMRSNAKAVNFGIVYGIGAFSLSKDI 727 Query: 778 NIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRA 837 N+ RKEA++Y+D YF RYP V +Y++ ++A+ G+V T+ R+ Y+P+I+S N R Sbjct: 728 NVSRKEAKEYIDTYFSRYPNVKKYIDEIISKAEVDGFVTTILNRKRYIPEIQSRNKIVRG 787 Query: 838 AAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVA 897 ER A+N P+QG+AADIIK AM+ V L+ + +I+QVHDEL+ V+KD+++ V Sbjct: 788 FGERLAMNTPIQGSAADIIKLAMVEVYNELKNRNLKSTLILQVHDELILNVYKDELEEVK 847 Query: 898 KQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 + + MEN +L VPL +V GE W +A Sbjct: 848 EMVVDKMENVMKLLVPLEADVNVGETWYEA 877 >UniRef50_B9YEU0 DNA polymerase I n=2 Tax=Cyanobacteria RepID=B9YEU0_ANAAZ Length = 982 Score = 918 bits (2374), Expect = 0.0, Method: Composition-based stats. Identities = 366/981 (37%), Positives = 524/981 (53%), Gaps = 76/981 (7%) Query: 6 QNPLILVDGSSYLYRAYHAFPP-----LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 ILVDG S +R+Y AF L AG PT +G + L +I KP AV Sbjct: 18 NPTFILVDGHSLAFRSYFAFAKGKNGGLRTKAGIPTSVCFGFIKCLLEVITTQKPQAIAV 77 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 FD TFR E + YK+ R P+D +E L+ +++ + LP+ G EADDV+GT Sbjct: 78 AFDLGLPTFRHEADDTYKADRLETPEDFIPDLENLNELLRGLNLPIFTAPGYEADDVLGT 137 Query: 121 LAREAEKAGRPVLISTGDKDMAQLV--TPNITLINTMTN---------TILGPEEVVNKY 169 L+++A AG V I +GD+D+ QL+ IT++N T E+V K Sbjct: 138 LSQKASAAGYRVKILSGDRDLFQLIDGDKGITVLNFSPEALKRYANSITEFQAEQVKEKL 197 Query: 170 GVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGA 229 GV P I+DF AL GD SDNIPGV G+GEKTA LL LD +YA+ ++I G + Sbjct: 198 GVLPTQIVDFKALCGDKSDNIPGVRGIGEKTAVKLLNTYNSLDGIYAKLDEITGST---- 253 Query: 230 KTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTA 289 KL KE A S LA I DV LE+ E ++ +L+ + +K EF ++ Sbjct: 254 ---QEKLIAGKEDASHSRYLAQIVVDVPLEVNLEDCQLTGFDTNQLIPILEKLEFNKFLD 310 Query: 290 DVE------AGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDN----YVTILDEETL 339 + G+ L+ K + ++ + + E TA + I E+ L Sbjct: 311 QINELQQKLGGQVLETKAEEINTTQEDDDLWFFSGEDTANTEKRPDSSIQIRIINTEDKL 370 Query: 340 KAWIAKLEK----APVFAFDTETDSLDNISANLVGLSFAIEPG--VAAYIPVAHDYLDAP 393 + +A L+K A+DTET +L+ A LVG+ G AAYIPV H Sbjct: 371 QELVAILQKCTNLEKPVAWDTETTALEPRDAALVGIGCCWGTGSDEAAYIPVGHKI---G 427 Query: 394 DQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVA 453 + + + L+P+LE+ K QN K+DR I GI L G+ FDTML SY++N Sbjct: 428 HNLQLDLVVSALRPILENANYPKTFQNAKFDRLIFKCQGINLVGVVFDTMLASYLINPD- 486 Query: 454 GRHDMDSLAERWLKHKTITFEEIA---GKGKNQLTFNQIALEEAGRYAAEDADVTLQLHL 510 H++ L+ R L + + +I GK + Q I ++ Y T QL Sbjct: 487 TTHNLSDLSLRNLGLQLTEYNDIVTKTGKKELQKNIADIGIDIVAYYCGTQVYATFQLVD 546 Query: 511 KMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKA 570 K+ +L K + +E PL VL+ +E GV+I+ L S++L LA+LE +A Sbjct: 547 KLRCELNKTPDLAKLLVEVEQPLEAVLAEMEYTGVRINSSYLQELSQQLESELAKLEIQA 606 Query: 571 HEIAGEEFNLSSTKQLQTILFEKQG--IKPLKKTPGGAPSTSEEVLEELA--LDYPLPKV 626 EIA E+FNL S KQL ILF+K G K +K G ST LE+L + Sbjct: 607 TEIASEKFNLDSPKQLSYILFDKLGLSTKYSRKIQTGY-STDAATLEKLQEVDNTGFVDA 665 Query: 627 ILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEG 686 I+EYR +KLKSTY D LP +++P++ R+HT ++Q T+TGRLSS++PNLQNIP+R Sbjct: 666 IIEYRTSSKLKSTYVDALPALVHPQSQRLHTDFNQTATSTGRLSSSNPNLQNIPIRTAFS 725 Query: 687 RRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPL 746 R+IR+AF+ +++V+ADYSQIELRI+AHLS++ L+ A+ + +DIH TA VF Sbjct: 726 RQIRKAFLPESGWLMVAADYSQIELRILAHLSQEPVLVQAYKQNEDIHTVTAKLVF--EK 783 Query: 747 ETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTR 806 + VTSE+RR AK INFG+IYGM + AR + + A +++ + ERYP V Y+E+ + Sbjct: 784 DEVTSEERRFAKTINFGVIYGMGSLKFARSTGVDKANANEFIRRFNERYPQVFAYLEKVK 843 Query: 807 AQAKEQGYVETLDGRRLYLPDIKSSN--------------------GARRAAAERAAINA 846 +A QGYVET+ GRR Y D S + GA A R+A NA Sbjct: 844 KEAISQGYVETILGRRRYF-DFTSKSLKELKGISLEDIDLSRLKNLGAYNAGLLRSAANA 902 Query: 847 PMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMEN 906 P+QG++ADIIK AM+ + L+ + R+++QVHDELVFEV + + QI +MEN Sbjct: 903 PIQGSSADIIKIAMVQLHEVLR--NYQARLLLQVHDELVFEVPPQEWGELQLQIKSVMEN 960 Query: 907 CTRLDVPLLVEVGSGENWDQA 927 L VPL+V+V +G+NW + Sbjct: 961 AMSLSVPLVVDVRAGDNWMET 981 >UniRef50_Q55971 DNA polymerase I n=13 Tax=Cyanobacteria RepID=DPO1_SYNY3 Length = 986 Score = 918 bits (2373), Expect = 0.0, Method: Composition-based stats. Identities = 372/1003 (37%), Positives = 542/1003 (54%), Gaps = 94/1003 (9%) Query: 1 MVQIPQNPLIL-VDGSSYLYRAYHAFP-----PLTNSAGEPTGAMYGVLNMLRSLIMQYK 54 M ++PL+L VDG S +RAY+AF PL +AG PT +G LN L ++ K Sbjct: 1 MFMSAKSPLLLLVDGHSLAFRAYYAFGLSKKGPLRTTAGIPTSVCFGFLNSLMQVMESQK 60 Query: 55 PTHAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEA 114 P A+ FD + TFR E YKS+R P+D + L +++A+ L + +G EA Sbjct: 61 PAAIAIAFDRREPTFRHEADGAYKSNRQETPEDFAEDLSYLQQLLEALNLQTITYAGYEA 120 Query: 115 DDVIGTLAREAEKAGRPVLISTGDKDMAQLVTP--NITLINTMTNTI--------LGPEE 164 DD++GTLA + AG V I +GD+D+ QLV+P NI+++ N L + Sbjct: 121 DDILGTLACQGSDAGYQVKILSGDRDLFQLVSPEKNISVLYLTRNPFSSNTGYDELDWQG 180 Query: 165 VVNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGL 224 VV+K GV P I+DF AL GD SD IPG+ G+GEKTA LL L+ +Y +I G Sbjct: 181 VVDKMGVTPAQIVDFKALCGDKSDCIPGINGIGEKTAIKLLAEYETLEKVYENLAQIKG- 239 Query: 225 SFRGAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEF 284 + +L+ K+ A S LA I DV L +T E L++ + + L+ L +K E Sbjct: 240 ------ALKTRLDNGKDDAMHSQMLARIVVDVPLPVTWEDLQLTGFSTDRLVPLLEKLEL 293 Query: 285 KRWTADVEAGKWLQAKGAKPAAKPQETSVAD----------------------------- 315 + + ++A + P E + Sbjct: 294 RTFIDKIQAFHRNFSDNQSPVPMGNEADNGEPKKTVKAKKSKEKVNPDDSQQLSLFDGVP 353 Query: 316 ----EAPEVTATVISYDNYVTILDEETLKAWIAKLEKAP----VFAFDTETDSLDNISAN 367 E +T + I L+A + +L+K A+DTETDSLD + AN Sbjct: 354 VVNQEDGLITIQLPKQIQPQIITTIAQLEALVEELKKHTDADFPVAWDTETDSLDPLVAN 413 Query: 368 LVGLSFAI--EPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDR 425 LVG+ A EP AYIP+ H +Q+S +LL +L + KV QN K+DR Sbjct: 414 LVGIGCAWGQEPNQVAYIPLKHH---QGEQLSLGIIKDLLGEILGNAIYPKVLQNAKFDR 470 Query: 426 GILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERW-LKHKTITFEEIAGKGKNQL 484 +LA++GIEL G+ DTML SY+L H++ L R+ L ++++++ K Sbjct: 471 RVLAHHGIELGGVVLDTMLASYVLQPEET-HNLTDLCRRYNLGLVALSYKDLGLK--KDQ 527 Query: 485 TFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNG 544 T + LE AG+Y D T L K+ +L ++ + + IE PL +L+ +E G Sbjct: 528 TIADLPLETAGQYCGLDCYATYLLASKLQKELDQYPELKEILKEIEQPLEKILAAMEDRG 587 Query: 545 VKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG--IKPLKKT 602 ++ID L S++L L +E A+E AGE FNLSS KQL TILF+K G K +KT Sbjct: 588 IRIDCDYLQTLSQQLAENLLTIETAAYEAAGESFNLSSPKQLGTILFDKLGLDRKKSRKT 647 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST LE+L D+P+ ILE+R LAKLKSTY D LP ++N +T R+HT ++QA Sbjct: 648 KTGY-STDHATLEKLQGDHPIIDAILEHRTLAKLKSTYVDALPELVNGQTQRIHTDFNQA 706 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKG 722 VT+TGRLSS++PNLQNIP+R++ R+IR+AF+ +D+++VSADYSQIELRI+AHLS++ Sbjct: 707 VTSTGRLSSSNPNLQNIPIRSDFSRQIRRAFLPQKDWLLVSADYSQIELRILAHLSQEPV 766 Query: 723 LLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRK 782 LL A+ + +D+H TA +FG E +T +R K INFG+IYGM A AR+ I Sbjct: 767 LLQAYGDRQDVHGVTAKLLFG--KEDITPAERNLGKTINFGVIYGMGAQRFARETGISAV 824 Query: 783 EAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA--- 839 E ++++D Y Y V +Y+E + +A +GYV T+ GRR Y + + R Sbjct: 825 EGREFIDRYHRTYAQVFDYLETMKLEAIAKGYVTTIVGRRRYFNFVTEALRQLRGKTVTE 884 Query: 840 ---------------ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDEL 884 R+A NAP+QG++ADIIK AM+ + L++ Q RM++QVHDEL Sbjct: 885 LDLVDVKMNYNDAQLLRSAANAPIQGSSADIIKIAMVKLAKLLESYQ--TRMLLQVHDEL 942 Query: 885 VFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 +FE+ ++ + +A I ME L VPL+VE+ G NW +A Sbjct: 943 IFEMPPEEWEELAPLIQNTMEQALTLSVPLVVEMHRGSNWMEA 985 >UniRef50_C2MBR8 DNA polymerase type I n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MBR8_9PORP Length = 948 Score = 914 bits (2362), Expect = 0.0, Method: Composition-based stats. Identities = 359/966 (37%), Positives = 544/966 (56%), Gaps = 63/966 (6%) Query: 7 NPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 L L+D + +YRAY+AF PL ++ G T A+YG + L+ +I + +P + AV D Sbjct: 2 PTLYLLDAYALIYRAYYAFINRPLVDAQGRDTSALYGFASTLQDIIDKERPDYIAVAMDM 61 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 G TFR + + YK++RP P+ +R + + +V+A +PLL V G EADD+IGTL+R+ Sbjct: 62 PGGTFRHKEYPEYKANRPETPETIRFSMPYIKELVQAYQIPLLGVEGYEADDLIGTLSRQ 121 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVP-PELIIDF 179 A +AG V + T DKD QLV P+ + +LG EE+ KYG+ P +ID+ Sbjct: 122 AVEAGYEVRMVTPDKDYGQLVGPHAQMFAPQRTGSGFELLGAEEITAKYGIRYPLQMIDY 181 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 L L+GDSSDN+PG PG+G+ AQ LL+ ++ +YA +++ T A KL Sbjct: 182 LGLVGDSSDNVPGCPGIGKVAAQRLLEEFDTIEDIYARIDQVK-------PTYAKKLLAA 234 Query: 240 KEVAYLSYQLATIKTDVE-LELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVE-----A 293 KE LS L TI TDV + +Q++ + P + +FK++ F + A Sbjct: 235 KEQTMLSRHLVTIVTDVPGVTFDPDQMKWRGPDHAAVERIFKEFAFTSLLKRIGKPAATA 294 Query: 294 GKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTI-------LDEETLKAWIAKL 346 + +A P + + A V+AT +NY T+ E + +L Sbjct: 295 AQVGLFDLGGSSAAPSLPATIEVAGPVSATTP-LENYKTVGVTFTEVQGYEAVSQLAKQL 353 Query: 347 EKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLK 406 + V AFDTETD LD + A +VG+S + A +IP+ +A L LK Sbjct: 354 AGSSVVAFDTETDGLDALCAGIVGMSLCADEKQAYFIPLPESAEEA------THILSPLK 407 Query: 407 PLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWL 466 L++DE+ LKV N K+D +L YG+ +DTML Y++++ G H +D LA L Sbjct: 408 ELMQDERVLKVAHNAKFDLEVLTRYGLPEARPLYDTMLAHYLIDADQG-HSLDELAGGLL 466 Query: 467 KHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVF 526 ++ TI +++++ L + + YA+EDA VTL+L+ + L + Sbjct: 467 RYDTIRYKDLSPLEIFALR-TDVDPKLLCDYASEDAYVTLRLYQALHKQLS--PTEQRLL 523 Query: 527 ENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNL--SSTK 584 +E+PL+ VL +E+ G+ +D + L +EL + LEK+ + NL +S K Sbjct: 524 TEVEIPLLYVLMHMEQRGIVLDIEALQRSRQELLESVLRLEKEIQSYSSRGLNLKVNSPK 583 Query: 585 QLQTILFEKQG-IKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDK 643 Q+ +LF++ ++ +KT G+ T+EE L L +P+ +IL+YR KL +TY D Sbjct: 584 QIGELLFDELQIMEKPRKTKTGSYVTNEETLLPLRSLHPVVALILDYREARKLLNTYIDP 643 Query: 644 LPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE------ 697 LP M P G++HTSY+QAVTATGRLSS++PNLQNIP+R++ GR +R+AF+A Sbjct: 644 LPKMCYP-DGKLHTSYNQAVTATGRLSSSNPNLQNIPIRSDLGRPLRRAFVADPYYTPRL 702 Query: 698 --------------DYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFG 743 V++SADYSQ+ELR+MAHLS+D ++ +F G DIH ATAA+VF Sbjct: 703 SACAPVDHTHEKPIGAVLLSADYSQVELRVMAHLSQDPAMIHSFLSGDDIHTATAAKVFK 762 Query: 744 LPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYME 803 + E VT R AK NFG+ YG++ +GL+++LNIP EA + + YF + + +M Sbjct: 763 VAPEEVTPLMRSKAKTANFGINYGITPYGLSQRLNIPVGEAAELIKEYFATFTHIQAFMN 822 Query: 804 RTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAV 863 A A E+GY ET GRR L +++++ GA+R AER AINAP+QGTAADIIK AMI V Sbjct: 823 EAIALATERGYTETAFGRRRQLRNLRTARGAQRGNAERNAINAPIQGTAADIIKIAMIRV 882 Query: 864 DAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCT-RLDVPLLVEVGSGE 922 + L +Q R +++QVHDELV V+ D+++ V + + ME VPL+VE+G+G+ Sbjct: 883 EEELTKQQLRSYLVLQVHDELVLNVYLDELERVTALVREAMECAWPECSVPLVVEIGTGK 942 Query: 923 NWDQAH 928 +W +AH Sbjct: 943 DWLEAH 948 >UniRef50_Q3ABL3 DNA polymerase I n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ABL3_CARHZ Length = 831 Score = 913 bits (2360), Expect = 0.0, Method: Composition-based stats. Identities = 340/926 (36%), Positives = 510/926 (55%), Gaps = 102/926 (11%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 ++LVDG+S L+RA+ A PPL + GEPTGA+YG L ML +I KP + AV FD Sbjct: 2 GKVVLVDGNSLLHRAFFALPPLKTTKGEPTGAVYGFLTMLFRVIKDEKPEYLAVAFDISR 61 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 KTFR E F YK HR PD+L Q + ++K + +P + + G EADD+IG L+R Sbjct: 62 KTFRTEQFTAYKGHRKEAPDELVPQFALVREVLKVLNVPYIELDGYEADDIIGHLSRAFA 121 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLAL 182 G V+I T D+DM QLV + T + ++ YG+ P+ ++D L Sbjct: 122 GQGHEVVIYTADRDMLQLVDEKTVVYLTKKGITELVKMDLAAILENYGLKPKQLVDVKGL 181 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 MGD SDNIPGVPG+GEKTA L++ G ++ + A +++ + KL +++ + Sbjct: 182 MGDPSDNIPGVPGIGEKTALDLIKTYGSVEEVLAHKDELK-------PKLREKLAEHENL 234 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A +S QLATI ++ LE++ E L+V++P EE+ LF + EFK + ++E Sbjct: 235 AKISKQLATILREIPLEISLEDLKVKEPNYEEVAKLFLRLEFKSFLKEIE---------- 284 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 P++ + V + ET + IA + + D E Sbjct: 285 ---------------PKIKKEYQEGKDLVQVETVET-EGQIAVVFSDGFYVDDGEKTKFY 328 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 ++ L ++ + ++K + + K Sbjct: 329 SL-----------------------------------DRLNEIEEIFRNKKI--ITDDAK 351 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 + G+ + FD + +Y+LN + L +LK+ +E++ Sbjct: 352 GIYHVCLEKGLTFPEVCFDARIAAYVLNPADQNPGLKGL---YLKYDLPVYEDV------ 402 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 + + L +M + + + +F IE+PL PVL+++E Sbjct: 403 ----------------SLNIRGLFYLKKEMMKKIFEQE-QERLFYEIELPLTPVLAQMEH 445 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 G+++D + L S EL ++ EL ++ + +AGEEFNL+S +QL ILFEK G+ +KKT Sbjct: 446 TGIQVDREALKEMSLELGEQIEELIREIYVLAGEEFNLNSPRQLGVILFEKLGLPVIKKT 505 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST EVLEEL + + IL YR L KLKSTYTD L +IN +TG++HT+++Q Sbjct: 506 KTGY-STDAEVLEELLPFHEIIGKILNYRQLMKLKSTYTDGLMPLINERTGKLHTTFNQT 564 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY-VIVSADYSQIELRIMAHLSRDK 721 T TGRL+S++PNLQNIP+R E GR++R+ FI Y IVSADYSQIELR++AH S + Sbjct: 565 GTLTGRLASSEPNLQNIPIRLELGRKLRKMFIPSPGYDYIVSADYSQIELRLLAHFSEEP 624 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 L+ A+ +G+DIHR TA+EVFG+ LE VT E R AK++NFG++YG+S FGL R L IPR Sbjct: 625 KLIEAYQKGEDIHRKTASEVFGVSLEEVTPEMRAHAKSVNFGIVYGISDFGLGRDLKIPR 684 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 + A KY+ YF YP V EY++ A+E+GYV TL GRR Y+P++ S N + ER Sbjct: 685 EVAGKYIKNYFANYPKVREYLDELVRTAREKGYVTTLFGRRRYIPELSSKNRTVQGFGER 744 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 A+N P+QG+AADIIK AMI V+ L+A + + R+++ VHDELV EV ++++ V + Sbjct: 745 TAMNTPLQGSAADIIKLAMINVEKELKARKLKSRLLLSVHDELVLEVPAEELEEVKALVK 804 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQA 927 +ME+ L VPL+ EVG+G+NW +A Sbjct: 805 GVMESVVELKVPLIAEVGAGKNWYEA 830 >UniRef50_P74933 DNA polymerase I n=3 Tax=Bacteria RepID=DPO1_TREPA Length = 997 Score = 911 bits (2356), Expect = 0.0, Method: Composition-based stats. Identities = 345/1007 (34%), Positives = 507/1007 (50%), Gaps = 97/1007 (9%) Query: 6 QNPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + L L+D +YR+YHAF PL N +G A+YG L +L+ Y+P + VFD Sbjct: 4 KKTLYLLDAYGLIYRSYHAFARAPLINDSGANVSAVYGFFRSLHTLLCHYRPRYFVAVFD 63 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 + TFR + YK+ R +L AQI + ++ A+G+ +L G EADD+I TLA+ Sbjct: 64 SLTPTFRHVQYPAYKAKRDKTSAELYAQIPLIEEILCALGITVLRHDGFEADDLIATLAK 123 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLIN---TMTNTILGPEEVVNKYGVPPELIIDFL 180 V+I + DKD+ QLV + ++ T V ++ V P ++D Sbjct: 124 RVAAEHCHVVIISSDKDVLQLVCDTVQVLRLDIDHKWTCCDAAYVQQRWTVMPTQLLDLF 183 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 +LMGDSSDN+PGV G+G KTA LL G LD +Y + + + K+ K Sbjct: 184 SLMGDSSDNVPGVRGIGPKTAAHLLHCFGTLDGIYRHTYSLK-------EALRTKIVCGK 236 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEA------- 293 + A+ S L ++ DV + E +F + A Sbjct: 237 KDAFFSRSLIELRDDVPCVFSLEDSCCIPLDVTSAARIFVREGLHALAQQYRACVQEIDT 296 Query: 294 ---------------------GKWLQAKGAKPAAKPQETSVADEAPEVTATV-------- 324 + ++ A+ P+ SV + +A Sbjct: 297 EATNDTLQMTESSVLTSGRCANECFLSQVEGRASTPEVNSVLKSELKTSAVSGAIPIENR 356 Query: 325 ---------ISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAI 375 S +Y + D LK I V AFD ETD L LVG S Sbjct: 357 DLRQDVMLARSAGHYRGVTDPVELKRIIDCACANGVVAFDCETDGLHPHDTRLVGFSICF 416 Query: 376 EPGVAAYIPV--------------------------------AHDYLDAPDQISRERALE 403 + A Y+P+ D + + Sbjct: 417 QEAEAFYVPLIVPDVSLHTESTQCTCARSTNVETEKECTEQHGVSASAVQDPAYVQAVMH 476 Query: 404 LLKPLLEDEKALKVGQNLKYDRGILANYGI--ELRGIAFDTMLESYILNSVAGRHDMDSL 461 L+ L DE V N K+D ++ G+ FDTM+ +++L+ G + MD L Sbjct: 477 QLRRLWNDETLTLVMHNGKFDYHVMHRAGVFEHCACNIFDTMVAAWLLDPDRGTYGMDVL 536 Query: 462 AERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKG 521 A + + +TITFEE+ KG+ TF + E A RYAAEDAD+T +L+ + L+ G Sbjct: 537 AASFFQIRTITFEEVVAKGQ---TFAHVPYECAVRYAAEDADITFRLYHYLKLRLETA-G 592 Query: 522 PLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLS 581 L+VFE IEMPL+P+L+R+E G+ + V+ + + + + E +AG EFN+ Sbjct: 593 LLSVFETIEMPLLPILARMEEVGIFLRKDVVQQLTRSFSDLIQQYEHDIFSLAGHEFNIG 652 Query: 582 STKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYT 641 S KQLQT+LF++ + P KK G ST VL++LA +P+ + IL +R L+KL+STYT Sbjct: 653 SPKQLQTVLFQELHLPPGKKNTQGY-STDHSVLKKLARKHPIAEKILLFRDLSKLRSTYT 711 Query: 642 DKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVI 701 + L + + +TGRVHTS+ Q TATGRLSS +PNLQNIP+++ EGR+IRQAF A + + Sbjct: 712 ESLAKLAD-QTGRVHTSFVQIGTATGRLSSRNPNLQNIPIKSTEGRKIRQAFQATVGHEL 770 Query: 702 VSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAIN 761 +SADY+QIEL ++AHLS+D+ LL AF + DIH TAA +F + ++ V RR AK IN Sbjct: 771 ISADYTQIELVVLAHLSQDRNLLNAFRQHIDIHALTAAYIFNVSIDDVQPAMRRIAKTIN 830 Query: 762 FGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGR 821 FG++YGMSAF L+ +L I +KEAQ ++ YFE YPGV + + Q ++ GYV +L GR Sbjct: 831 FGIVYGMSAFRLSDELKISQKEAQSFIYRYFETYPGVYAFSTQVAEQTRKTGYVTSLAGR 890 Query: 822 RLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVH 881 R Y+ I S N RA AER A+N +Q +AADI+K AMIA+ R ++++QVH Sbjct: 891 RRYIRTIDSRNTLERARAERMALNTQIQSSAADIVKIAMIAIQRAFARRPLRAQLLLQVH 950 Query: 882 DELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 DEL+FE + V + + ME+ L +PL + V SG +W H Sbjct: 951 DELIFEAPAAETAIVKEILFAEMEHAVELSIPLRIHVESGNSWGDFH 997 >UniRef50_C7HT94 DNA polymerase I n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HT94_9FIRM Length = 893 Score = 910 bits (2351), Expect = 0.0, Method: Composition-based stats. Identities = 330/924 (35%), Positives = 525/924 (56%), Gaps = 53/924 (5%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 ++L+DGSS ++RA+ A P LTN+ G T +YG L M + +YKP + V FD K Sbjct: 17 KKVMLIDGSSLIFRAFFALPNLTNADGVMTNGVYGFLTMYFRAVEEYKPDYILVAFDKKT 76 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 KTFR + FE YK++R P++L Q L ++ ++ + L + G EADD++GT + A+ Sbjct: 77 KTFRHKEFEDYKANRDKAPNELNYQFGILKDILDSLNVKYLDIDGYEADDIVGTFSTIAK 136 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLAL 182 + G +I TGDKD QLV + + T + + + + YG+ P+ +ID L Sbjct: 137 EEGLETVIITGDKDYFQLVNDKVVVFLTRKGISQMEEITVKSIEDDYGLSPKQLIDVKGL 196 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 MGD SDNIPGV G+GEKTA ++ G ++ LY + I G K LE +K++ Sbjct: 197 MGDKSDNIPGVDGIGEKTAIKFIKKYGSMEGLYENLDDIKG------KKTKENLENSKQI 250 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A+LS ++ TI T+ + + +L+V++P + L F KY F ++ E Sbjct: 251 AFLSKKIGTIVTNAPVGMKISELKVKEPDLDSLREKFSKYNFNKFMEKFE---------- 300 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 ++E + S+ + +I+D+ +EK VF F + + + Sbjct: 301 ---------DTSEERKDEIEFSYSFSDDFSIIDD---------IEKDGVFYFKSIFEEDN 342 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 I +N ++ + Y+ PD E+ +E K E + KV ++K Sbjct: 343 YIHSNAYKIAIKTSS--------SKTYIYNPD----EKFVEKFKKYFEADNIKKVSFDIK 390 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 D + GI + DTML Y+++ +D+ + ++ +LK++ E++ GKGK+ Sbjct: 391 EDIVLFDKLGINISLPYDDTMLMHYLIDPSRSSYDLKTFSQAFLKYEVENEEDLLGKGKS 450 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 + ++ + + G+Y A + + L++ +++++ E+ L VL+ +E Sbjct: 451 KKSYKDLDSDNLGKYLASIVNAIEDSLDILTQKLEEL-SMYDLYKDCEIKLSKVLADMEI 509 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 G D L +E++L L +LEK +E+AG EFN++S KQL ILFE + +KKT Sbjct: 510 TGFICDKNELEKIKDEVSLELGDLEKIIYELAGSEFNINSPKQLSKILFEDLKLPIIKKT 569 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST+ +VLE+L +P+ + I YR + KLKSTY + L I+ + GR+ +++ Q Sbjct: 570 KTGY-STNAQVLEKLRKKHPIIEKIERYREMYKLKSTYLESLEECID-EDGRIRSTFKQN 627 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKG 722 VTATGRLSST+PNLQN+P+R EEGR+IR+AF A + V++ ADYSQIELR++AHL+ DK Sbjct: 628 VTATGRLSSTEPNLQNLPIRTEEGRKIRKAFKADDGKVLIDADYSQIELRVLAHLANDKK 687 Query: 723 LLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRK 782 + AF++ DIH TA+EVF P++ VT QR AKA+NFG+IYG+S +GL++ LNIPRK Sbjct: 688 MQEAFSKDIDIHTKTASEVFSTPIDEVTKLQRSEAKAVNFGIIYGISDYGLSQNLNIPRK 747 Query: 783 EAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERA 842 A++Y++ Y + YP + +YM+ +AKE GYV T+ RR Y+P+I S N R+ ER Sbjct: 748 RAKEYIENYLDTYPEIKKYMKDIVKKAKEDGYVNTIFNRRRYVPEINSKNFNVRSFGERV 807 Query: 843 AINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQ 902 A+N P+QGTAADIIK AMI LQ + ++++Q+HDE++ E K D++ + + Sbjct: 808 ALNTPIQGTAADIIKFAMINSYQNLQKAKIDAKIVLQIHDEIIIEASKKDLEKAKEILKS 867 Query: 903 LMENCTRLDVPLLVEVGSGENWDQ 926 M++ L VPLLV++ SGE+ + Sbjct: 868 SMQDAVDLKVPLLVDIDSGESMYE 891 >UniRef50_C4Z982 DNA polymerase I n=2 Tax=Clostridiales RepID=C4Z982_EUBR3 Length = 903 Score = 906 bits (2341), Expect = 0.0, Method: Composition-based stats. Identities = 354/940 (37%), Positives = 524/940 (55%), Gaps = 59/940 (6%) Query: 8 PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 L+L+DG S L RAYH P LTNS G T A+YG LN++ ++ + KP + V FD Sbjct: 4 KLVLIDGHSILNRAYHGLPDLTNSEGLHTNAVYGFLNIMFKILDEEKPDYLTVAFDVHAP 63 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 TFR +F+ YK R PM ++LR Q+ + M+ AMG+ ++ G EADD++GTL+ AEK Sbjct: 64 TFRHRMFDAYKGTRKPMDEELRQQVPMIKEMLTAMGIKIVEKEGYEADDILGTLSVRAEK 123 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTNTI------LGPEEVVNKYGVPPELIIDFLA 181 AG V I +GD+D+ QL T ++ + T +V+ KYGV P+ ID A Sbjct: 124 AGMDVAIISGDRDLLQLATDHVMVRIPKTKKTGTEIENYNTADVIEKYGVTPKEFIDVKA 183 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 L GD+SDNIPGVPG+GEKTA AL+ ++ ++ + E + + + + E Sbjct: 184 LQGDTSDNIPGVPGIGEKTAGALIAKYHCIEAVHEDAENVK------PPRASKNIVEYWE 237 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQ----PAAEELLGLFKKYEFKRWTADVEAGKWL 297 A +S +LATI D ++ ++ EE L K+YEFK + Sbjct: 238 QALMSKELATIILDAPVDYEFSDAKLSGGVESLYTEEAFLLCKRYEFKNMLSRFNV---- 293 Query: 298 QAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTE 357 EAP+ A +++V + D +T ++ K + V Sbjct: 294 ------------------EAPKNNAE----EHFVVVRDLKTAESVFEKAKDREVAFAVVP 331 Query: 358 TDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDA-------PDQISRERALELLKPLLE 410 +SL+N ++ LS EP Y+ V+ + + D+IS E L L Sbjct: 332 GESLENSESD-GQLSLFSEPVSNDYLAVSICFSEEDIYFICTGDEISSSFLDEKLNTL-- 388 Query: 411 DEKALKVGQNLKYDRGILANYGIEL--RGIAFDTMLESYILNSVAGRHDMDSLAERWLKH 468 E + +LK + + I+ RG FD M+ +Y++N + G + D++A+ +L Sbjct: 389 -EVKSWISPDLKTNLHRFKSKEIKADDRGRYFDMMVAAYLINPLVGEYPYDAVAKDYLGL 447 Query: 469 KTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFEN 528 + ++ GK + + ++A A + + + L K L ++ + Sbjct: 448 MLSSKKDYLGK-LDFTQMMKEDEKKAVDCACYEVYTAWKSKPVLLQKL-KEMNMLTLYRD 505 Query: 529 IEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQT 588 IE+PLV VL +E G++ D L + ++L + + ELEKK +E AGEEFN++S KQL Sbjct: 506 IELPLVFVLYDMENEGIRADGIKLKEYGDKLAVSITELEKKIYEAAGEEFNINSPKQLGV 565 Query: 589 ILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMI 648 ILFEK G+ KKT G ST+ +VLE+LA +YP+ ILEYR L KLKSTY D L I Sbjct: 566 ILFEKLGLPNEKKTKTGY-STAADVLEKLAPEYPIVADILEYRQLTKLKSTYADGLSGYI 624 Query: 649 NPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQ 708 G++HT+ +Q +TATGRLSST+PNLQNIP+R E G+ IR+ F+ E + V +DYSQ Sbjct: 625 -ASDGKIHTTLNQTITATGRLSSTEPNLQNIPIRIELGKLIRKVFLPEEGDLFVDSDYSQ 683 Query: 709 IELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGM 768 IELR++A LS D+ ++ AF G+DIHR+TA+ VF P + VT QRR+AKA+NFG++YG+ Sbjct: 684 IELRVLAALSGDERMIEAFKNGQDIHRSTASLVFDTPFDEVTDLQRRNAKAVNFGIVYGI 743 Query: 769 SAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDI 828 SAFGL+ L I RKEAQ Y+D YF +YP + E++++T AK+ GY +T+ GR +P++ Sbjct: 744 SAFGLSNDLGISRKEAQGYIDSYFVKYPKIKEFLDQTVLDAKKNGYTKTMFGRIRPIPEL 803 Query: 829 KSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEV 888 SSN +R ER A+N+P+QGTAADIIK AMI V L E + R+I+QVHDEL+ E Sbjct: 804 NSSNFMQRQFGERVAMNSPIQGTAADIIKIAMIRVHDRLLDEGLKSRLILQVHDELLIET 863 Query: 889 HKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 + + D V K + + M + V + V G +W AH Sbjct: 864 KEAEKDKVIKLLEKEMRGAVDMKVSMEVGTECGYDWYDAH 903 >UniRef50_C7GEY2 DNA polymerase I n=6 Tax=Clostridiales RepID=C7GEY2_9FIRM Length = 930 Score = 904 bits (2337), Expect = 0.0, Method: Composition-based stats. Identities = 344/936 (36%), Positives = 521/936 (55%), Gaps = 30/936 (3%) Query: 8 PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 L+L+DG S L RA+ P LTNS G T A+YG LN++ ++ + +P + V FD Sbjct: 8 KLVLIDGHSILNRAFFGIPDLTNSEGLHTNAVYGFLNIMFKILEEEQPDYLTVAFDVSEP 67 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 TFR ++F YK R PM +LR Q+ + M+KAMG+ + G EADD++GT+A+++E+ Sbjct: 68 TFRHKMFAEYKGTRKPMAQELREQVPLMKEMLKAMGVTTIEKGGYEADDLLGTIAKQSEQ 127 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTNTI------LGPEEVVNKYGVPPELIIDFLA 181 G V + +GD+D+ QL T +I + T EV KY V P ID A Sbjct: 128 KGLTVSVVSGDRDLLQLATDHIKIRIPKTKRTGTEIEDYNAAEVQEKYQVTPIEFIDVKA 187 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGD++DNIPGVPG+GEKTA A++ G ++ YA +++ + L++ + Sbjct: 188 LMGDTADNIPGVPGIGEKTATAIIAQYGSVENAYAHVDELK------PPRASKNLKEYYD 241 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQP---AAEELLGLFKKYEFKRWTADVEAGKWLQ 298 +A +S LATI+ +++ ++ EE L K+ EFK ++ Sbjct: 242 LAQMSKTLATIEIHADIDYDLSGAKLNGISSLYTEEAYLLCKRLEFKNLLNRFA----VE 297 Query: 299 AKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTET 358 + A + EA +V A + D I+ + + + + + Sbjct: 298 TPKNQAAEHFKLVEDRKEAEKVFAKLRGKDCGFYIVFGDKKRDSHEEADGQMNLFAAGDM 357 Query: 359 DSLDNISANLVGLSF--AIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALK 416 D+ + +V + A+E + A I + A ++L E A Sbjct: 358 PGADSEPSGIVESAENDAVECCLGAAISTGEEETFFIKAGENLPAKQILSMFTASEAASY 417 Query: 417 VGQNLKYDRGILANYGIELRGIA-----FDTMLESYILNSVAGRHDMDSLAERWLKHKTI 471 +LK L ++ G FD +L +Y+LN + + + +A+ ++ Sbjct: 418 ATLDLKPQLAALGLLERQVNGNIGLSNLFDGVLAAYLLNPLKNEYPYEDIAKDYMGQMIP 477 Query: 472 TFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEM 531 + ++ GK + E Y A V + DL K +G ++F IEM Sbjct: 478 SKADLLGKLTIEQAMKDAP-EAFLNYVCYMAYVAQASKKTLETDL-KEEGMDHLFTEIEM 535 Query: 532 PLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILF 591 PLV L+ +E G+ + L + ++L +R+AELEK+ +E AGEEFN++S KQL ILF Sbjct: 536 PLVFTLADMENEGIIACREALTEYGDKLAVRIAELEKQIYEEAGEEFNINSPKQLGVILF 595 Query: 592 EKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPK 651 EK + KKT G ST+ +VL+ LA +YP+ ILEYR L KLKSTY D L I K Sbjct: 596 EKLSMPYGKKTKTGY-STAADVLDRLAPEYPIVSDILEYRQLTKLKSTYADGLVNYI-AK 653 Query: 652 TGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIEL 711 GR+HTS++Q +TATGRLSST+PNLQNIP+R E GR IR+AF+ E + + ADYSQIEL Sbjct: 654 DGRIHTSFNQTITATGRLSSTEPNLQNIPMRIELGRLIRKAFVPKEGFEFMDADYSQIEL 713 Query: 712 RIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAF 771 R++AH+S D+ L+ A+ E +DIHR TA++VF +P + VT QRR+AKA+NFG++YG+S+F Sbjct: 714 RVLAHMSGDEKLIEAYREAQDIHRITASQVFHIPFDEVTDLQRRNAKAVNFGIVYGISSF 773 Query: 772 GLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSS 831 GL++ L+I +KEA +Y++ YFE YP + +++ A+AKE+GYV T+ GRR +P++ SS Sbjct: 774 GLSQDLSISKKEAAEYIERYFETYPKIKTFLDGLVAEAKEKGYVTTMFGRRRPVPELSSS 833 Query: 832 NGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKD 891 N +R+ ER A+N+P+QGTAADIIK AMI V L E + R+I+ VHDEL+ E + Sbjct: 834 NFMQRSFGERVAMNSPIQGTAADIIKIAMIRVHDRLLKENLKSRLILTVHDELLVETAIE 893 Query: 892 DVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 + DAV K + + M L V L ++ G+NW +A Sbjct: 894 EEDAVRKILEEEMHGAADLAVTLEIDAHVGKNWYEA 929 >UniRef50_D1VS49 DNA polymerase I n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VS49_9FIRM Length = 885 Score = 903 bits (2335), Expect = 0.0, Method: Composition-based stats. Identities = 332/928 (35%), Positives = 527/928 (56%), Gaps = 48/928 (5%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + +N +++DGSS +RA++A P L G T A+YG + ML + I + KP+H V FD Sbjct: 1 MSKNIFLIIDGSSLFFRAFYALPLLKTKRGIYTNAIYGFVMMLENAIERVKPSHIVVCFD 60 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 KGKTFR EL++ YK R P++L Q + ++K M + +L EADD+ GTL+ Sbjct: 61 RKGKTFRSELYKDYKGTRQKTPNELEQQFPLVRDILKYMNIVVLDSPVYEADDIAGTLSL 120 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDF 179 A K G + TGDKD QLV N ++ T ++ + + + YG+ P+ ID Sbjct: 121 IASKEGYKSYLLTGDKDYYQLVDDNTNVLMTRKGITELEVVNLQSINDDYGISPQEFIDL 180 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 LMGDSSDNIPGVPG+G KT L++ ++ LY +I+G K + LE+N Sbjct: 181 KGLMGDSSDNIPGVPGIGPKTGLKLIKEYSTIENLYNHLSEISG------KKLKENLEEN 234 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 K A++S +L TI +++L + L++++ E L L++ +EF + Sbjct: 235 KVQAFMSKKLGTIVRNIDLPVGLSDLKIKEYDYENLSKLYRDFEFNSILKRLP------- 287 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 E ++ E++ T N ++++ I ++ + FAF +D Sbjct: 288 ----------EKYQKEKTEEISDTFFQISN-------DSIEDIIENIKTSKSFAFKFISD 330 Query: 360 SLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQ 419 + I+P A +P ++ + L LK L ED+ K+G Sbjct: 331 GK---------IYEGIDPFKIAILPKGYNTSVID---YNKDNLSNLKALWEDDSIEKLGY 378 Query: 420 NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 +LK D +L I+L+ D+M+ Y+LNS +++D LA + + EE+ GK Sbjct: 379 DLKEDIIVLQYNKIDLKNYCHDSMIAEYLLNSTESNYEIDHLASSYFNKAYKSEEELLGK 438 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 G + F +I + Y + ++ ++ ++ G +++ N+E+PL+ VL+ Sbjct: 439 GVKKKKFQEIDEGDLNSYFSYILNMVYKISPLQMQKIEAE-GMKDLYVNVELPLIEVLAN 497 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 +E G++ D +L+ E++ R+ +LE ++ A E+FN++S KQL ILFEK + + Sbjct: 498 MEIVGIRTDVNILNEIDEKIKERINDLEFNIYKDADEQFNINSPKQLGQILFEKMDLPVI 557 Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 KKT G STS +VLE+L + ILEYR ++K+K+TY D L +IN KTGR+H+ + Sbjct: 558 KKTKTGY-STSADVLEKLRGKSLIIDNILEYRKISKIKNTYIDGLRDVINKKTGRIHSRF 616 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSR 719 +Q VT+TGR+SST+PNLQNIP++ EGR IR+A ++ E +V +DYSQIELR++A LS Sbjct: 617 NQTVTSTGRISSTEPNLQNIPIKTHEGRLIRKALLSSEGSSLVDSDYSQIELRVLASLSN 676 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 D ++ AFA+G DIHR TA+EVF P + V+ E R AKA+NFG++YG+S +GL++ LNI Sbjct: 677 DTYMINAFADGLDIHRKTASEVFHTPYDEVSDELRSMAKAVNFGIVYGISDYGLSQNLNI 736 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 PRKEA+ Y+D Y + G+ +YM E+GYVETL RR Y+P++K+ N R+ Sbjct: 737 PRKEAKTYIDNYLGHFQGIKKYMNDIIHVGTEKGYVETLLHRRRYIPELKAKNFNIRSFG 796 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 ER A+N P+QGTAADIIK AM+ V L+ + + ++I+Q+HDELV + ++V V + Sbjct: 797 ERIALNTPIQGTAADIIKIAMVGVYKELKKKNLKAKLILQIHDELVVDAPDEEVAEVCEI 856 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWDQA 927 + +M+N + VPL V + +G++ + Sbjct: 857 MKDVMDNALIMKVPLSVSMKTGKSLYET 884 >UniRef50_Q6MPP6 DNA polymerase I n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MPP6_BDEBA Length = 863 Score = 903 bits (2333), Expect = 0.0, Method: Composition-based stats. Identities = 352/922 (38%), Positives = 515/922 (55%), Gaps = 60/922 (6%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 + L+D S+ +RA++A L++ +G P A+YG L+M+ L+ + KP + +D K Sbjct: 2 KKIYLIDVSAMFFRAFYAIRALSSPSGVPVNAVYGFLSMMIKLLKEEKPEYLVFCYDRKE 61 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 +FR +++ YK+HR MPD+L QI + + +G+P V EADD+IGTL + + Sbjct: 62 PSFRKTMYDGYKAHRTEMPDELAQQIPYIKRLADLLGVPAFEVESFEADDIIGTLTKWSR 121 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDS 186 + G V I +GDKD QL+ +TL +TM E V K+GV P+ ID+LA++GD+ Sbjct: 122 RNGMEVFIVSGDKDFGQLIEDGVTLYDTMKGVRYNAEGVFEKWGVRPDQFIDYLAIVGDA 181 Query: 187 SDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLS 246 SDN+PGV GVGEK A LL+ ++ +Y +K+ +K++ KL +K+ A LS Sbjct: 182 SDNVPGVKGVGEKGAIKLLEQFKHVEDIYENIDKV------ESKSVREKLIASKDNALLS 235 Query: 247 YQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAA 306 +L TI DV + E +++ A+EL + FK + + Sbjct: 236 KKLVTISCDVPMPDDLEAYKLKPFKADELRAFLHELNFKSFEKSL----------FGTVD 285 Query: 307 KPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISA 366 + + ++I D+ IAK E+ T + D ++ Sbjct: 286 TTPAAAAPAAPAGPLIKTAAPSAPLSIADDVAPTIVIAKEERQFTEKSMTTRELADFLAE 345 Query: 367 NLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRG 426 + F+ GV ++ QI + E L L + + G +LK Sbjct: 346 HQSLWGFSDMRGV---------FIGTESQIIQVPDHEYLGKLTDTFQVQWHGYDLK---S 393 Query: 427 ILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTF 486 G + A+D+ L +Y+L + A+ + + ++A Sbjct: 394 FWHKIGAKTPVAAWDSQLAAYVLKAGDTS----DFAKIYTRFMADVLPDLAS-------- 441 Query: 487 NQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVK 546 + Y A+ L + LQ +G V++ +++PL VL +ER GV+ Sbjct: 442 ------PSQLYNAQ-----LNFATTLKSQLQTVQGE-KVYQELDLPLARVLLSMERLGVR 489 Query: 547 IDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGA 606 ID +L SEEL +AE+EK+ HE AGE FN+ S KQL ILFEK G+ KKT G Sbjct: 490 IDKDLLAKQSEELAKDIAEIEKQIHEAAGESFNVGSPKQLGVILFEKLGLPAGKKTKTGY 549 Query: 607 PSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTAT 666 ST EEVL L L++P+ K++L++R ++KLKSTY D LP MI+PK RVHTS++QA+T T Sbjct: 550 -STDEEVL--LGLEHPIAKLVLQWREMSKLKSTYVDALPTMIDPKDERVHTSFNQALTTT 606 Query: 667 GRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTA 726 GRLSST PNLQNIP+R G+++R+AFIA ++S DYSQIELRI+AH+S D L A Sbjct: 607 GRLSSTQPNLQNIPIRTARGQQVRKAFIAAPRMKLLSVDYSQIELRILAHISEDPNLCKA 666 Query: 727 FAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQK 786 FAE DIH ATAAEVFG+PL+ VT+E RRSAKA+NFG+ YG AFGLA L I R EA+ Sbjct: 667 FAEDLDIHAATAAEVFGVPLKDVTAEHRRSAKAVNFGIAYGQGAFGLAENLGISRTEAKD 726 Query: 787 YMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINA 846 ++ YF R+ V EY++ T A E+GYVETL GRR Y+ +++S N A + ERAAINA Sbjct: 727 IIERYFNRFKNVREYIDGTIKMAHEKGYVETLFGRRRYIDELQSKNMALKKFGERAAINA 786 Query: 847 PMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMEN 906 P+QGTA+D++K+AMI V E+ VRM++QVHDEL+FE ++++ + Q+ +MEN Sbjct: 787 PIQGTASDLVKKAMIEVF-----EKVPVRMLLQVHDELIFEDFEENLQKHSPQLVSIMEN 841 Query: 907 CTRLDVPLLVEVGSGENWDQAH 928 +L VPL V G NWD+AH Sbjct: 842 VMKLKVPLKVNYAIGNNWDEAH 863 >UniRef50_B1YKA1 DNA polymerase I n=3 Tax=Bacilli RepID=B1YKA1_EXIS2 Length = 865 Score = 901 bits (2328), Expect = 0.0, Method: Composition-based stats. Identities = 339/933 (36%), Positives = 504/933 (54%), Gaps = 78/933 (8%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + +N L+L+DG+S YRA+ A PP+T++ G T A YG ML L+ + +PTH V FD Sbjct: 1 MMENKLLLIDGNSLTYRAFFALPPMTDAQGRNTNAAYGFTMMLLKLLEEEQPTHMLVAFD 60 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 A +TFR ++++ YK R P +LR Q + + +A+G+ ++ + EADD+IGTLA+ Sbjct: 61 ASSETFRHDVYQEYKGSREKTPSELREQFPIVRDICEALGIQMMELHRYEADDLIGTLAQ 120 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI----LGPEEVVNKYG-VPPELIID 178 + I TGDKD+ QLVT + ++ T + E YG + P +ID Sbjct: 121 TMPA--DRIRIVTGDKDLLQLVTSQVEVLITKRGITDVLCMTEELFAETYGGLKPIQMID 178 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 LMGD SDNIPGVPG+GEKTA L+ G ++ LY E + G K+ Sbjct: 179 LKGLMGDKSDNIPGVPGIGEKTAIKLISAYGSVEGLYEHVEDLKG-------KQKEKVVA 231 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 N+E+A LS +LATIK DV L++T + L++ + LF+ FK T Sbjct: 232 NEELARLSKELATIKLDVPLDVTLDDLQISDVDTQVPYSLFQSLGFKSLTNRF------- 284 Query: 299 AKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTET 358 + + L+ + + + + A + E Sbjct: 285 ------------------------APVVEEADKEQLNVQAITSLPEDVTDAVLVV---EQ 317 Query: 359 DSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLED---EKAL 415 D + +++G A PDQI A + P D Sbjct: 318 LREDYMEEDIIGFGIAT-----------------PDQIYVASAELVDDPAFRDWIESDHQ 360 Query: 416 KVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEE 475 K+ + K L +G++L AFD +L + L +++G + S+A ++ E Sbjct: 361 KICLDAKQAAFALRKHGLKLT--AFDDLLLAGYLLNLSGGTTLASIAGHYM-LMAPNEEA 417 Query: 476 IAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVP 535 + GKG +L + Y AE A + L K+ +L+ ++ ++E +E PL Sbjct: 418 VLGKGAKRLAPAD---DVLHPYLAEKARMIELLFPKVKEELKANQ-QFELYETLERPLSG 473 Query: 536 VLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG 595 VL+ +E G+++D L +L RL +LE+ + GEEFN++S KQL ILFEK Sbjct: 474 VLAEMEWTGIRVDVGTLQEMQHDLAGRLHDLEQLIYGEVGEEFNINSPKQLGVILFEKME 533 Query: 596 IKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRV 655 + KKT G ST+ +VLE+L +P+ I+ YR L KL+STY + L +I + G++ Sbjct: 534 LPAFKKTKTGY-STAADVLEKLRPLHPVIDHIMLYRELQKLQSTYVEGLQKVI-KEDGKI 591 Query: 656 HTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIELRIM 714 HT + Q + TGRLSS +PNLQNIPVR EEGR+IR+AF+ + + +ADYSQIELR+M Sbjct: 592 HTRFAQTIAQTGRLSSVNPNLQNIPVRIEEGRKIRKAFVPSEPGWSLYAADYSQIELRVM 651 Query: 715 AHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLA 774 AH+S DK L+ AF + DIH TA+ VFG+ VT RR AKA+NFG+IYG+S +GL+ Sbjct: 652 AHMSEDKTLVQAFLDDADIHTQTASSVFGVAPNDVTGNMRRQAKAVNFGIIYGISDYGLS 711 Query: 775 RQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGA 834 + LNI RKEAQ ++D YFE +P + +M+ +A+ G+VETL RR +PDI S N Sbjct: 712 QNLNISRKEAQDFIDRYFELFPQIKLFMDAAIEKARMNGFVETLMNRRRNIPDINSKNFN 771 Query: 835 RRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVD 894 R AER AIN P+QG+AADIIK+AM+ V A L+ R R+++QVHDEL+FE +++D Sbjct: 772 LRGFAERTAINTPIQGSAADIIKKAMLDVHAALEQSPLRARLLLQVHDELIFEAPDEELD 831 Query: 895 AVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 A+ + Q ME +L VPL V+ +G +W + Sbjct: 832 ALKTLVKQAMEQTVQLSVPLRVDGDAGHSWYET 864 >UniRef50_D1AZX7 DNA polymerase I n=3 Tax=Campylobacterales RepID=D1AZX7_SULD5 Length = 885 Score = 900 bits (2326), Expect = 0.0, Method: Composition-based stats. Identities = 333/924 (36%), Positives = 510/924 (55%), Gaps = 46/924 (4%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L ++D + +R Y+A P L NS G PTG + G N + ++ ++ + D+KG Sbjct: 2 KTLTIIDTFGFFFRNYYALPQLRNSQGFPTGLLTGFANFIYAIKNEHDTDYVMFALDSKG 61 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 K FR EL +YK++RP P++L+ Q+ + ++ MG + G EADDVI + + A+ Sbjct: 62 KNFRHELDPNYKANRPEAPEELKKQLPVAISWIEKMGFKCYSEEGFEADDVIASAVKFAK 121 Query: 127 KAGRPVLISTGDKDMAQLVTP-NITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185 + G V I T DKD+ QL+ + + + M + E+ K+GV P+ I ++L+L+GD Sbjct: 122 RHGIKVRIVTHDKDLYQLIDDGRVVIYDPMKKIEIDSEKCFEKFGVYPDKINEYLSLVGD 181 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 ++DNIPGV G+G K A+ LL G ++ +YA E+IA + LE+ +E A+L Sbjct: 182 TADNIPGVKGIGPKGAKKLLDDFGSVENIYANLERIAN------PRSKSMLEEGRESAFL 235 Query: 246 SYQLATIKTDVELELTCEQLEVQ-QPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304 S QL + + + T E + +KYE + + V P Sbjct: 236 SKQLVRLDDSLNIADTFEAFYFPCDNPLVNIADELEKYELRHMLSRVRNEALHVKIKEAP 295 Query: 305 AAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNI 364 + + + + D + L I +E+ AFDTET++LD Sbjct: 296 SNTFRA--------------------ILVDDAKILFNVIEGIEEGSWVAFDTETNALDAY 335 Query: 365 SANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYD 424 +A +VG SFA+ A Y+P+AH YL +QI E A E LK L K VGQNLKYD Sbjct: 336 NAKIVGFSFALNEHEAYYVPLAHHYLGVGEQIGMEEAKEALKKLF---KHKIVGQNLKYD 392 Query: 425 RGIL-ANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQ 483 ++ N+G+ L DTML +++LN +D+LA+R+ H + F+++ K +N Sbjct: 393 LAVIENNFGLRLSSSYADTMLMAWLLNP-ESNVGLDTLAKRFFNHDMVKFKDVVSKNEN- 450 Query: 484 LTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERN 543 F+ + L++A YA+EDA +TL+L+ K+ L L + + +E P + L R+E+ Sbjct: 451 --FSHVPLDKACEYASEDAWMTLKLYNKLHDML--EPRLLEIAKEVEFPFILTLMRMEKE 506 Query: 544 GVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTP 603 G+KID + + L+ + + +FNL+ST+QL T+LFE+ G+ P+KKT Sbjct: 507 GIKIDGAYFEALLKRTDGAIDALKHEIFTLCDAQFNLNSTQQLGTVLFEQLGLPPVKKTK 566 Query: 604 GGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLM-INPKTGRVHTSYHQA 662 G ST E VL EL +P ILEYR L KL+STY + L + GRVHTS+ Q Sbjct: 567 TGY-STDENVLNELLDKHPSIAKILEYRELYKLRSTYIEPLLKLSKESPLGRVHTSFIQT 625 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKG 722 T+TGRLSS DPNLQNIPV+ GR +R F+A E V++ DYSQIELR++AH S D+ Sbjct: 626 GTSTGRLSSKDPNLQNIPVKTALGREVRGGFVAKEGCVLIGIDYSQIELRLLAHFSNDEA 685 Query: 723 LLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRK 782 ++ AF +GKDIH TA ++FG E + +R AK+INFGL+YGM L+ L I Sbjct: 686 MVKAFRDGKDIHYETALKLFG---EQEAASKRSVAKSINFGLLYGMGPKRLSETLGISMA 742 Query: 783 EAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERA 842 EA++Y++ YF +P + Y+ QAK GYVETL GR+ + D + +N + A R Sbjct: 743 EAKRYIESYFATFPTIKAYVMEVAEQAKTTGYVETLLGRKRFF-DFEHANAMQYAGYLRE 801 Query: 843 AINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQ 902 A+N QG+AAD+IK +M + A L ++ ++++Q+HDEL+FEV + + A + + Sbjct: 802 AVNTVFQGSAADLIKLSMNKIMATLIHDE--AKLLLQIHDELIFEVVESQAQSFALEAQK 859 Query: 903 LMENCTRLDVPLLVEVGSGENWDQ 926 +ME L +PL V + G+NW + Sbjct: 860 VMEEIYALRIPLKVSIAMGKNWGE 883 >UniRef50_C7RDU0 DNA polymerase I n=3 Tax=Anaerococcus RepID=C7RDU0_ANAPD Length = 879 Score = 899 bits (2324), Expect = 0.0, Method: Composition-based stats. Identities = 321/924 (34%), Positives = 501/924 (54%), Gaps = 53/924 (5%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 ++L+DGSS ++RA+ A P LTN+ G T +YG L M + +YKP + V FD Sbjct: 3 KTVMLIDGSSLIFRAFFALPKLTNNDGVMTNGVYGFLTMYNNAFDRYKPDYVLVAFDRAS 62 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 KTFR + FE YK R MP +L Q L ++ ++ + + G EADD++GT A+ A+ Sbjct: 63 KTFRHKEFEDYKGTRDKMPSELSYQFGILKDILDSLNVKYTDLDGFEADDIVGTYAKMAQ 122 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLAL 182 +AG ++ TGD+D QLV I + T + + ++G+ P+ +I+ L Sbjct: 123 EAGYESVLITGDRDYLQLVDEKIVVNLTKKGVSETKEYTVDTIKEEFGLSPKQLIEVKGL 182 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 GD SDNIPGV G+G K A +Q G ++ LY ++++G K L ++ + Sbjct: 183 EGDKSDNIPGVDGIGPKKAIGFIQKYGSIEGLYDHIDEVSG------KKTKQTLIDSEAI 236 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 AY+S ++ TI T +E E+L+V+ P E L + KY F ++ D++ G Sbjct: 237 AYMSKKIGTIVTSAPVEFDLEELKVKDPDLESLREKYSKYNFNKFLEDMDGG-------- 288 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 D T E I ++K F F + + Sbjct: 289 --------------------DSPKEDKDFTYEKLENPDKLIEAIKKNKEFTFKSIYEGDR 328 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 I + + L I + K + EDE+ +K ++K Sbjct: 329 YIHSEIYKLGIKTTDTPTYIID------------PDSDFVSKFKEIFEDEEIVKNSFDIK 376 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 D +L GI L+ D ML Y+++ +D+ L++ +L ++ + ++ GKGK Sbjct: 377 EDVVLLDKLGINLKLPYDDMMLMHYLIDPSRSSYDLKVLSQSYLDYEVKSPVDLLGKGKK 436 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 L + + +E G Y A + + L ++ L++++ IE+ L VL+ +E Sbjct: 437 ALKYQDLDFDELGNYLASGINAIEDSKEILEDKLDEYH-MLDLYKEIEIKLSKVLADMEI 495 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 G D KVL + E + + ++ ++ +E+AG EFN++STKQL +LF+ + +KKT Sbjct: 496 VGFVTDKKVLEDLKENIDKDIDKITEEIYELAGSEFNINSTKQLGEVLFKDLDLPVIKKT 555 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST+ +VLE+L + + I YR L KL+STY + L I+ + GR+ +++ Q Sbjct: 556 KTG-FSTNAQVLEKLRDKHQIIPKIERYRELFKLRSTYIEGLEKAID-EDGRIRSTFRQN 613 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKG 722 + ATGRLSS DPNLQN+P++ +EGR IR+AF A E +++ ADYSQIELRI+A LS D+ Sbjct: 614 IAATGRLSSQDPNLQNLPIKTDEGRLIRKAFRAEEGKILIDADYSQIELRILASLSGDRH 673 Query: 723 LLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRK 782 ++ AF EG DIH TA++VF L+ VT QR AKA+NFG+IYG+S +GL++ LNIPRK Sbjct: 674 MIDAFKEGVDIHTKTASKVFHTDLDKVTKRQRSEAKAVNFGIIYGISDYGLSQNLNIPRK 733 Query: 783 EAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERA 842 EA++Y+D Y YP + EYM+ +AKE GYVETL RR Y+P+I S N R+ +R Sbjct: 734 EAKEYIDNYMASYPSIKEYMDSIVEKAKEDGYVETLFKRRRYVPEINSRNFNVRSFGQRV 793 Query: 843 AINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQ 902 A+N P+QGTAADIIK AMI D L+ ++++Q+HDE++ E + D K + + Sbjct: 794 ALNTPIQGTAADIIKIAMIETDKNLKKAGLDAKIVLQIHDEIILEADESSKDEAIKILRE 853 Query: 903 LMENCTRLDVPLLVEVGSGENWDQ 926 MEN T L+VPL+V++ +G + + Sbjct: 854 SMENATDLEVPLIVDIDTGVSMYE 877 >UniRef50_B8FU82 DNA polymerase I n=2 Tax=Desulfitobacterium hafniense RepID=B8FU82_DESHD Length = 873 Score = 898 bits (2320), Expect = 0.0, Method: Composition-based stats. Identities = 329/925 (35%), Positives = 486/925 (52%), Gaps = 65/925 (7%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 + ++++DG+S R ++A P +T + G+PT ++G + ML L+++ KP + V FD Sbjct: 2 SKILILDGNSLANRTFYALPMMTTADGKPTNVLHGFMTMLLRLLLEQKPDYWVVAFDKTK 61 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 T R E + YK+ R PD L+ Q + L ++ A +P+L G EADD+I T+ AE Sbjct: 62 ATVRIEQYADYKAQRKETPDALKPQFDFLKELLTAFAMPILECPGYEADDIIATVTSLAE 121 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNTI----LGPEEVVNKYGVPPELIIDFLAL 182 + I TGD+D QL++P T+ T + KY + P IID L Sbjct: 122 QREWETQIYTGDRDALQLISPRTTVYLTRKGITEVDAYDEGALYEKYQLRPAQIIDLKGL 181 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 MGD+SDNIPGVPGVGEKTA LL G ++ + +KI+G K + L N + Sbjct: 182 MGDASDNIPGVPGVGEKTALKLLWEYGSVENVLDNIDKISG------KKLQENLRNNTDK 235 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A LS +LAT+ D+ LE+ ++L ++P + KY K A W + GA Sbjct: 236 ALLSKKLATMLYDIPLEIDLDRLVYRRPDEKTFTAALDKYVLKSV-----ARIWHEHHGA 290 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 K V+ + EE L + + Sbjct: 291 GEEGKDTP----------REEVLKPWPLRELTGEEWLARFPQWQADQGTLVLTCANTGGN 340 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 A + A V + + LLED + K + K Sbjct: 341 PHWARITAWGIA----------VGGESFILNWTDAAPEVRLAFSQLLEDSEVPKQVADSK 390 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 +L N I LRG++ D L +Y++N + + L + + I G G+ Sbjct: 391 VLYSLLLNEEIILRGVSLDIGLAAYLINPTRNKFEPLELVKEY----------IPGAGE- 439 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 F +A E + D+ + + G + +E PL P+L+ +E+ Sbjct: 440 ---FANLAEEASALAQVADSY----------KETLEELGLSALLHEMEEPLSPILAEMEK 486 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 G+ +D + L ELT+ L LE++ + AGE FN++S +QL ILFEK G+ P+KKT Sbjct: 487 QGIAVDVQRLQEFGRELTVELQRLEQEIYADAGETFNINSPQQLGHILFEKLGLPPMKKT 546 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST + LEEL + + + +L+YR L+KL STY + L I+ GRVHT++ Q Sbjct: 547 KTGY-STDADTLEELRDQHSIVERVLDYRQLSKLMSTYVNGLLAQIHE--GRVHTTFQQT 603 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIELRIMAHLSRDK 721 VTATGRLSST+PNLQNIP+R E GR +R+ F E +V++SADYSQIELRI+AH S+D+ Sbjct: 604 VTATGRLSSTEPNLQNIPIRLELGRLLRKVFTPTQEGWVLLSADYSQIELRILAHYSQDE 663 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 L +F+ +D+H TA+EVFG+P+ VT + RR AKA+NFGLIYG++ FGL R L +PR Sbjct: 664 VLCESFSLNQDVHTRTASEVFGIPMAEVTKDMRRKAKAVNFGLIYGLTDFGLGRDLGVPR 723 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 KEA+ Y++ YF RY GV Y+E +AKE+G V TL R +P+++ N +R ER Sbjct: 724 KEAKTYIETYFHRYEGVKRYLEEIVVKAKEEGQVRTLLNRLRRIPELRHPNRVQRQFGER 783 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 A+N P+QGTAADI+K AM+ V L+ R +++QVHDELV EV +D++ VAK + Sbjct: 784 IAMNTPIQGTAADIMKLAMLGVAEALKPY--RANLLLQVHDELVIEVAPEDLEEVAKVVR 841 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQ 926 + ME+ L VPL+ + +G NW Sbjct: 842 EEMESAFPLSVPLIADCKTGPNWYD 866 >UniRef50_C7MNN5 DNA polymerase I n=2 Tax=Coriobacteriaceae RepID=C7MNN5_CRYCD Length = 885 Score = 897 bits (2319), Expect = 0.0, Method: Composition-based stats. Identities = 361/939 (38%), Positives = 510/939 (54%), Gaps = 73/939 (7%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTN-SAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 + ++DG+S ++RAYHA PP N G PT A++G L+M I P FD Sbjct: 3 KTIAVIDGNSLMHRAYHAVPPTMNAPDGTPTNAVFGFLSMFLKFIDIAHPDAVVCAFDVG 62 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 R E YK+ RPPM DDLR Q + ++ AMG+P + V G E DD++GT+A Sbjct: 63 KPQHRIAALEQYKAQRPPMDDDLRVQFPVVEQVLAAMGIPAVKVPGWEGDDILGTIAARG 122 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLA 181 + AG L+ TGDKD QL + + ++NT I P V KYGV PE I DFL Sbjct: 123 DAAGYDTLLVTGDKDACQLASDHTRIVNTKRGISDVVIFDPAGVEEKYGVSPEQIPDFLG 182 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGDSSDNIPGVPG+G KTA LLQ G ++ +Y +++ G + N++ Sbjct: 183 LMGDSSDNIPGVPGIGPKTAAKLLQRFGSIEGIYEHLDELKG-------KQQESIRDNRD 235 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK- 300 A+LS +A IK D++ EL E L E + F+K + V + +A Sbjct: 236 AAFLSRDVAIIKCDLDFELDLENLTFPSFNEEAVTAAFEKLGMRAHLGRVLSLIGEEAPV 295 Query: 301 GAKPAAKPQETSVADEAPEVTATVISYDNY----------VTILDEETLKAWIAKLEKAP 350 G A K Q+ + DEA + A V+ TI D+E L KL Sbjct: 296 GHVVALKWQDYTRNDEAYNLIAQVLDDSVECTGAERIGMAFTISDQENLFESGLKLA--- 352 Query: 351 VFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLE 410 A DT ++ A + L FA+ + I V + + AL+ + P Sbjct: 353 -VACDTGCALIEGDRARAL-LGFAVGRSSSLRIAV----------LDAKEALQCVYPPDT 400 Query: 411 DEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKT 470 E+ + D + FD L +Y+L+S R+D LAE +L+ Sbjct: 401 AEEI----HIAEADLFAMN---------FFDVTLAAYVLDSSVSRYDFSYLAETYLEGAL 447 Query: 471 ITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIE 530 E+ + Q + ++ + D G V++ I+ Sbjct: 448 APVEDDDDRLVMQAACLRALIDPMSQALVAD-------------------GTKGVYDTID 488 Query: 531 MPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTIL 590 +PLVPVL+ +ER G +D L +A++ ++ +E+AGE+FN+ S +Q+ IL Sbjct: 489 LPLVPVLAHMERIGALLDTDTLQALGSRTAQNIADISERIYELAGEKFNIDSPQQVSHIL 548 Query: 591 FEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINP 650 F+ G+ P K+T G ST +VLE+L+ ++ LP +ILEYR LAK+ TY D LP + Sbjct: 549 FDVIGLPPRKRTSRGY-STDAKVLEDLSSEHQLPGLILEYRELAKIMGTYIDALPKL-RG 606 Query: 651 KTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQI 709 GR+HTS+++ VT TGRLSS++PNLQNIPVR E GR IR+ FI +++ VSADYSQI Sbjct: 607 ADGRLHTSFNETVTTTGRLSSSNPNLQNIPVRTEFGRHIRECFIPLSPEHLFVSADYSQI 666 Query: 710 ELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMS 769 ELR++AHLS D L+ AF G D H ATAA VFG+P+E VT E R AKA+NFG++YG Sbjct: 667 ELRLLAHLSGDAHLIDAFRSGADFHSATAARVFGVPVEEVTPELRSRAKAVNFGIVYGQQ 726 Query: 770 AFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIK 829 AFGL++ L IP EAQ +D YF YP V Y++ AQA E+GY T+ GR+ ++P+++ Sbjct: 727 AFGLSQSLRIPFGEAQAMIDRYFTAYPVVRAYLDNIVAQAHEKGYALTMFGRKRHIPELR 786 Query: 830 SSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVH 889 + N +RA ER A+N PMQGTAADIIK+AM+ VDA L+ E P +M++QVHDEL V Sbjct: 787 AHNAQQRAFGERIAMNHPMQGTAADIIKKAMVEVDARLRHEFPNAKMMIQVHDELDLSVP 846 Query: 890 KDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 D V V+ + ++MEN LDVPL+V+V S +NW +AH Sbjct: 847 ADQVGEVSALLKEVMENVVELDVPLIVDVQSAKNWAEAH 885 >UniRef50_Q7WZP8 DNA polymerase type I n=2 Tax=unclassified Bacteroidetes RepID=Q7WZP8_9BACT Length = 939 Score = 896 bits (2316), Expect = 0.0, Method: Composition-based stats. Identities = 353/948 (37%), Positives = 527/948 (55%), Gaps = 53/948 (5%) Query: 7 NPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 L L+DG S +YRA+ A T + G TGA+ G +N L +L+ + KPTH V FD Sbjct: 6 PKLFLLDGMSLIYRAHFALGKAATTTAQGLKTGAILGFVNTLVALLEKEKPTHLIVAFDG 65 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 K KTFR LF YKSHRP P+++ I + ++++ G+ + SG EADD++GTLA++ Sbjct: 66 KEKTFRHALFPAYKSHRPVQPEEISIAIPYIKSILEGFGILAITYSGYEADDLLGTLAKK 125 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTM----TNTILGPEEVVNKYGV-PPELIIDF 179 A G I + DKD+AQ+V NI L +TILG +E++ ++ + PE + D Sbjct: 126 AAVMGCRTYIMSTDKDLAQIVGDNIYLYKPSSYGEKSTILGEKEILAQWEIARPEQVRDI 185 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 LAL GD SD IPG+P +G+KTA+ L++ L+ + A + G + A L Q Sbjct: 186 LALEGDPSDFIPGIPSIGKKTARKLIKEFDNLENILAHSHMLTG-------KLKANLIQY 238 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ- 298 + LS +LATI+T+V + L E+ Q P +L +F EFK+ + + Sbjct: 239 ADQGILSKELATIRTNVPITLDLEKCHYQGPNKVKLEPIFSLLEFKQLKQRLFGKPNPEK 298 Query: 299 --------AKGAKPAAKPQETSVA-----DEAPEVTATVISYDNYVTILDEETLKAWIAK 345 G P AK QE + + D P T D Y I + + K Sbjct: 299 ATNQPVGLFDGINPMAKSQENNHSNGHGLDRQPHTTEGQHEQDAYALIETLPACEKLLEK 358 Query: 346 LEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELL 405 LE A +AFD T +D A+L+G++FA +PG A YI + P++ + + L LL Sbjct: 359 LESATKWAFDIATTGMDPHLADLLGIAFAYQPGTAYYIAL------PPNKAAAQPFLALL 412 Query: 406 KPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERW 465 +PL + LKVG NLK ++ +G+ + FDTM+ ++ + H + +L+E++ Sbjct: 413 QPLFQRTDVLKVGHNLKNALIVMQRHGLSIAPPLFDTMIAHGLV-AADMDHHLTTLSEQY 471 Query: 466 LKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNV 525 L H++ + E YA E AD+ L ++ K+ L++HK + Sbjct: 472 LNHRSYL---------KPPNRAEKESEGIKNYAGEGADLVLHIYPKIAQALREHK-VATL 521 Query: 526 FENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQ 585 F +EMPLV VL +E GV ID L E+ L++K + +A FN+ S KQ Sbjct: 522 FYRVEMPLVQVLVAMELAGVSIDLPFLATLGSEMEPTTKALKEKIYTLAQTTFNIDSPKQ 581 Query: 586 LQTILFEK--QGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDK 643 L +LFEK KP+K T GG +T E +L +L+ +P+ +I+EYR KL+STY D Sbjct: 582 LGVVLFEKLALHTKPMK-TKGGQYATGEAILAKLSKVHPIVPLIMEYRTWQKLRSTYVDA 640 Query: 644 LPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIV 702 LP +++P R+H +YHQ V TGRLS+T PNLQ IP+R GR +R+AFI + + Sbjct: 641 LPTLLHPIDQRLHATYHQTVVTTGRLSATGPNLQQIPIRTPTGRALRKAFIPHQKGDCLF 700 Query: 703 SADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINF 762 SADYSQIELRIMA ++D ++ AF +DIH+ TA ++F + V E R+ AK NF Sbjct: 701 SADYSQIELRIMAAYAQDTTMIMAFQSDQDIHQITAQKLFKTVI--VDQEMRQKAKIANF 758 Query: 763 GLIYGMSAFGLARQL-NIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGR 821 G+IYG+S FGL+ ++ ++ RKEA + ++ YFE +PG+ Y++ + A A+ GYV TL GR Sbjct: 759 GIIYGISPFGLSERMEHLSRKEAAELIEAYFEAFPGIKTYIDDSIAHAEANGYVRTLLGR 818 Query: 822 RLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVH 881 + +LPD+ +SN R A R AIN P+QG+AA++IK AMI + WL+ + ++I+QVH Sbjct: 819 KRFLPDLYASNPTTRGVARRNAINTPIQGSAAEMIKLAMIHIQDWLEKHKLSTKLIIQVH 878 Query: 882 DELVFEVHKDDVDAVAKQIHQLMENCTRL-DVPLLVEVGSGENWDQAH 928 DELVF V + ++ + I LM L +VP+ V G NW +AH Sbjct: 879 DELVFNVPRSEIADIQHHIPLLMATALPLENVPIKVNWNIGANWLEAH 926 >UniRef50_D1BM52 DNA polymerase I n=6 Tax=Veillonellaceae RepID=D1BM52_VEIPT Length = 873 Score = 895 bits (2313), Expect = 0.0, Method: Composition-based stats. Identities = 357/927 (38%), Positives = 510/927 (55%), Gaps = 66/927 (7%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L+++DGSS L+RA+ A PPL ++ G PT A+YG L ML L + P + AV FD Sbjct: 2 KKLMIIDGSSLLFRAFFALPPLKSALGTPTNAVYGFLTMLIKLYEEINPDYIAVAFDKGR 61 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 +TFR E++ YK +RP P+DLR Q + ++KA+G+ ++ G E DD++G+L+++ Sbjct: 62 QTFRTEMYSEYKGNRPDAPEDLRPQFSLIQDVLKALGICVIEEEGFEGDDILGSLSKKFG 121 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNTI----LGPEEVVNKYGVPPELIIDFLAL 182 V I TGD+D QLVT + + T + + + YG P+ +I+ AL Sbjct: 122 APEMAVQIITGDRDNLQLVTEHSHVFLTKKGISDMLEVTLDNMEELYGYGPDKVIEMKAL 181 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 MGDSSDNIPGVPGVGEKTA L+ G L+++Y E I+G K + +L +NKE+ Sbjct: 182 MGDSSDNIPGVPGVGEKTALKLITEYGNLESVYEHIEDISG------KKLKERLVENKEL 235 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A+LS +LATIKTD+EL E VQ E+ LF+ F + T + +Q G Sbjct: 236 AFLSRELATIKTDMELSYKVEDF-VQNFHTSEVQPLFETLGFTKLTPRI-----VQVMGG 289 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 + AA S+ E++ + D K A K A D Sbjct: 290 EEAAFGDPGSLFAPQEEIS-----------LDDLADAKVLTADFYKDKTVAVHVILDGKT 338 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKV---GQ 419 Y+ + D + L+ K ++ + + G Sbjct: 339 PFRT-----------VTNTYLSNGDTIVKTDDTKAVLAVLQGAKAIVTTQTKEIIEAFGA 387 Query: 420 NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 ++ + + + D L +Y+L+ + L ER+ + +G Sbjct: 388 DVPAEISLFNA---DKTARVHDMSLIAYLLDPTRTNYGYLYLTERF---SVPSI--ASGS 439 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 + AL A E A + + +++E IE+PL+ L Sbjct: 440 VDVECVSMVKALLAMNEAACESA---------------RREELWSLYETIELPLIHTLVV 484 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 +E+NG+ ID + L + LA+++++ +E+AGE FN++S KQL ILFEK + + Sbjct: 485 MEKNGIYIDTEKLAETTTRFKEELAQVQQEIYELAGENFNINSPKQLGVILFEKMNLPII 544 Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 KKT G ST EVL+ L + P+ + IL YR +AKL STY + L ++IN KT R+HT++ Sbjct: 545 KKTKTGY-STDAEVLDMLRHESPIVEKILAYRSVAKLVSTYCEGLAVLINDKTRRIHTTF 603 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY-VIVSADYSQIELRIMAHLS 718 +Q VTATGRLSS+DPNLQNIPVR E+GR IR F Y +VSADYSQIELRI+AHLS Sbjct: 604 NQMVTATGRLSSSDPNLQNIPVRTEKGREIRALFYPGAGYDTLVSADYSQIELRILAHLS 663 Query: 719 RDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLN 778 D+ L+ AF EGKDIHR TAAEV G + VTSE+R AKAINFG+IYG+S FGL+R L Sbjct: 664 GDEALIKAFVEGKDIHRFTAAEVLGKAQDDVTSEERSHAKAINFGIIYGISDFGLSRDLG 723 Query: 779 IPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAA 838 I R EA+ Y+DLYF RYP V EYM+R +A E G V T+ GR+ LPDI S N RR+ Sbjct: 724 ITRGEAKNYIDLYFSRYPKVKEYMDRMVQEAHETGKVRTMFGRQRELPDINSRNFNRRSF 783 Query: 839 AERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAK 898 AER A+N P+QGTAADIIK AM ++ L+ + + R+++QVHDELV EV +++A+ + Sbjct: 784 AERTAMNTPIQGTAADIIKLAMNQMEQKLEEQNFKSRLLLQVHDELVLEVVNSELEAIEE 843 Query: 899 QIHQLMENCTRLDVPLLVEVGSGENWD 925 + M++ L VPL+V+V ENW Sbjct: 844 LLRNTMQSVVELQVPLIVDVHHAENWA 870 >UniRef50_A8SN89 DNA polymerase I n=2 Tax=Clostridiales Family XI. Incertae Sedis RepID=A8SN89_9FIRM Length = 888 Score = 890 bits (2301), Expect = 0.0, Method: Composition-based stats. Identities = 329/924 (35%), Positives = 489/924 (52%), Gaps = 55/924 (5%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 ++L+DGSS ++RA++A LT G +YG LNM + PTH V FD Sbjct: 14 KKILLIDGSSLIFRAFYAIRNLTTKDGVFVNGVYGFLNMYYKALELINPTHIFVAFDKGS 73 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 KTFR F YK R P+++ Q L ++ +M + L + EADD+IGT+A+ A+ Sbjct: 74 KTFRHNEFADYKGTRDNAPNEITYQFGILKDLLSSMNVNYLELDEYEADDIIGTIAKLAQ 133 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLAL 182 K G V I TGD+D QLV NI + T ++ E ++ +Y + P+ +ID AL Sbjct: 134 KEGFEVDIFTGDRDYLQLVDDNILVYLTKKGISEIKLMNTESILEEYDLSPKQLIDVKAL 193 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 GDSSDNIPGV GVGEKTA L+Q G L+ LY + + G + L K+ Sbjct: 194 QGDSSDNIPGVKGVGEKTALKLIQEYGNLENLYENIDNLKG-------KLKENLVNEKDK 246 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 AYLS L I V +E E E++ E L +K EF Sbjct: 247 AYLSRYLGEIFLRVPIERNIEDFEIKDVNYNEYLKKLEKLEFNSIINK------------ 294 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 D E T ++ I K++ + +D Sbjct: 295 ---------HFKDIKKESTVKSNQNIDFEVI----NFSEIFEKIKNDDEISIKFFSDKGY 341 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 + AYI + + +G ++K Sbjct: 342 IYRKKFY-IGIYSNFNKKAYI--------------CKNFKLSDFEKFCNLDIKIIGYDIK 386 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 + +E + D M+ Y+++S G +D+ ++ +L + + +E+ GKGKN Sbjct: 387 EELFFALKNNLEFKN-YEDVMILEYLIDSNKGNYDILKVSNEFLNLEILDLKEMLGKGKN 445 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 + TF ++ + ++ +++ L+ K ++++EN+E PLV VL+ +E+ Sbjct: 446 KKTFFELEEDIIFKFISQNVFAISALYDIFIEK-AKENNLISLYENVEKPLVKVLADMEK 504 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 GV +D + +EE + E+K +E+AGE FNL+S KQL ILFEK G+ +KKT Sbjct: 505 TGVLVDRNKIIELNEEYSKLAYLYEQKVYELAGEVFNLNSPKQLGVILFEKIGLPVVKKT 564 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST EVLE+L+ + + IL+YR L KL STY D + I GRV TS+ Q Sbjct: 565 KTGY-STDVEVLEKLSKKHEIVDYILKYRSLNKLISTYLDGILEYI-MDDGRVRTSFKQM 622 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKG 722 +TATGRLSS DPNLQNIP+R+EEG+ IR+ F+A ++ V + ADYSQIELR++AHLS+D Sbjct: 623 ITATGRLSSVDPNLQNIPIRSEEGKNIRKVFVADKNKVFIDADYSQIELRVLAHLSKDSV 682 Query: 723 LLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRK 782 ++ +F DIH TA+EVFG+P+ VT QRRSAKA+NFG++YG+S +GL++ LNI R Sbjct: 683 MIDSFKNDLDIHYKTASEVFGVPINEVTDNQRRSAKAVNFGIVYGISDYGLSKDLNITRN 742 Query: 783 EAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERA 842 EA++Y+D Y YP + YME +AK+ G+V T+ R+ Y+P+I S N R+ ER Sbjct: 743 EARQYIDGYLNTYPSIKSYMEEIVNKAKKDGFVTTILDRKRYIPEINSKNFNIRSFGERI 802 Query: 843 AINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQ 902 A+N P+QG+AADIIK AMI V L+ E+ ++I+Q+HDEL+ E + + + V K + Sbjct: 803 ALNTPIQGSAADIIKLAMIKVYERLKIEKVNAKLILQIHDELIVECEESEKETVKKILKN 862 Query: 903 LMENCTRLDVPLLVEVGSGENWDQ 926 MEN +LD+PL V++ G NW + Sbjct: 863 SMENVYKLDLPLKVDICEGRNWYE 886 >UniRef50_A1QZY0 DNA polymerase I n=1 Tax=Borrelia turicatae 91E135 RepID=A1QZY0_BORT9 Length = 919 Score = 890 bits (2301), Expect = 0.0, Method: Composition-based stats. Identities = 332/937 (35%), Positives = 521/937 (55%), Gaps = 35/937 (3%) Query: 7 NPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 + L+D + ++R YH PLTN GE A G L +I + P + V FD+ Sbjct: 2 KEIYLIDALNIIFRNYHVMKNNPLTNKKGENVNAFIGFFKTLFFIIKEKNPENLIVTFDS 61 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 + +TFR + + YK+ R PD+L QI + + +P+ + G EADD+I + A++ Sbjct: 62 ETQTFRQQKYPSYKATRDAPPDNLIPQIYWIKESLIKANIPMFEIQGYEADDLIASFAKK 121 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI--LGPEEVVNKYGVPPELIIDFLAL 182 AE I + DKD+ QL++ ++ ++ + + V+ K+GV I D+L++ Sbjct: 122 AEINNYLTYIISPDKDLLQLMSAKTKILKIENSSFVEMDNDYVMKKFGVNKSQIKDYLSI 181 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 +GD SDNIPG+ G+GEK A LL L+ +Y + I L + +E Sbjct: 182 VGDRSDNIPGIKGIGEKGAAKLLNEFQTLNGIYDNLDSINN-------KYREILLKEREN 234 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A+LSY+L ++ D+EL E+ ++ + E++L LF++Y + + Sbjct: 235 AFLSYELISLVEDLELP-ALEKFKL-ENLKEDILLLFEEYSATTLIKSYKTILKKRYATN 292 Query: 303 KPAAKPQETSVADEAPEVTATVISYDN-----------YVTILDEETLKAWIAKLEKAPV 351 + ET++ E+ T S+ N Y TIL +E L I KL++A Sbjct: 293 QTQKSLFETNINQTDTEILQTTTSHSNALKTIQEENIKYETILKKEQLDLLIEKLKQANY 352 Query: 352 FAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLED 411 A DTET SL+ A ++G+S + + + YIP+ I + ++ + Sbjct: 353 VAIDTETTSLNVHEAQIIGISVSFKEFESYYIPIE---TKEKKTIEKAYIIQKFNEFFKA 409 Query: 412 EKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTI 471 + L +GQN K+D IL + + FDTM+ +Y+++ + +D LAE++L HK I Sbjct: 410 QPKL-IGQNYKFDYKILKKHEFNVIPPYFDTMIAAYVIDPN-TKVSLDFLAEKYLMHKNI 467 Query: 472 TFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEM 531 +EEI T I LE YAAEDAD+T +L L K N+ +IEM Sbjct: 468 RYEEIV---AQNGTLKDIPLEMVSNYAAEDADITFRLFKIFTKKL-KEDNLENLMTDIEM 523 Query: 532 PLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILF 591 P V++ +E NG+ +D L + EL L +E + + G EFNL+STKQL T+LF Sbjct: 524 PFSNVITEMEENGIYLDKDYLRQYGYELDKELKLIENEIIKSIGIEFNLNSTKQLHTVLF 583 Query: 592 EKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPK 651 E+ + + ST +VLE + + +++YR +AKLK+TYTD L +N K Sbjct: 584 ERLNLVLPQNVK--QDSTDIKVLETIKEQHESIPKLIQYRQIAKLKNTYTDNLIEFVNEK 641 Query: 652 TGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIEL 711 T ++HT++ Q TATGR+SST PNLQNIP+++E+GR+IR+AF + + +SADYSQIEL Sbjct: 642 TNKIHTNFIQTKTATGRISSTSPNLQNIPIKDEKGRKIREAFKPEKGNIFISADYSQIEL 701 Query: 712 RIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAF 771 I+AHLS D+ L+ AF KDIH TA+++F + E VTS RR AK+INFG+IY MSAF Sbjct: 702 VILAHLSEDESLIEAFKNKKDIHIKTASQLFKVDEEKVTSSMRRIAKSINFGIIYRMSAF 761 Query: 772 GLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSS 831 L+++L+I R+EAQK++D YF Y + +++ ++ GY ETL RR Y+ +I S Sbjct: 762 RLSKELSIKREEAQKFIDSYFNLYSKIKTFIQNQIDFVRKNGYSETLLKRRRYIKEINSQ 821 Query: 832 NGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKD 891 N + R+ AER AIN+ +QG+A+DI+K AMI V L+++ + ++++QVHDE++ E + Sbjct: 822 NYSERSGAERIAINSTIQGSASDIMKIAMIKVYNELKSKNLKSKILLQVHDEMLIESPEQ 881 Query: 892 DVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 + + V K I +MEN L +PL V + +G++W + H Sbjct: 882 ECEEVNKIIKTMMENAYPLKIPLKVNIETGKSWGEIH 918 >UniRef50_C5RBK8 DNA polymerase I n=9 Tax=Lactobacillales RepID=C5RBK8_WEIPA Length = 931 Score = 890 bits (2299), Expect = 0.0, Method: Composition-based stats. Identities = 343/935 (36%), Positives = 507/935 (54%), Gaps = 48/935 (5%) Query: 4 IPQNPLILVDGSSYLYRAYHAF----PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAA 59 + + L+L+DG+S +RA++A N G T A+ G N+L +I + P A Sbjct: 33 MAKPTLLLIDGNSLAFRAFYALINQVDRFVNHEGLHTNALVGFNNLLDGIIDPFNPDLAL 92 Query: 60 VVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIG 119 V +DA TFR F++YK +R P +L Q EPL MV+ G+ + G EADD+IG Sbjct: 93 VAWDAGKTTFRTGKFDNYKGNRDNTPQELVEQFEPLRKMVELHGIKSYELPGFEADDIIG 152 Query: 120 TLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI----LGPEEVVNKY-GVPPE 174 T+AR E+ G V I TGD+DM QLV+ +IT+ T P + Y G+ P+ Sbjct: 153 TMARLGEENGYSVTIVTGDRDMTQLVSDDITVWVTKKGISEIDHYTPAMIAELYDGLEPK 212 Query: 175 LIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAA 234 I+D L GD+SDN PGV G+G KTA L++ + +Y + +++ A Sbjct: 213 QIVDIKGLQGDTSDNYPGVAGIGPKTALKLIKQYHSIPEMYEQIDEMK------ASKQKE 266 Query: 235 KLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAG 294 KL K+ A LS LA I TD + ++ L P E ++ ++ +FK + Sbjct: 267 KLVNGKQDAMLSRDLAKILTDAPVTISLSDLNYHGPDYENIIPFYQHLDFKAQLVKLANQ 326 Query: 295 KWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAF 354 + T A+ T +S ++ LK +F Sbjct: 327 GYTVPTSGH-------TKDAEFDINNTTLDVSAITPASLAHVSQLKD---------TVSF 370 Query: 355 DTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKA 414 E D+ + AN +G + D A I +K +LED Sbjct: 371 YLELDNENYHIANPIGFVIGNQA----------DGYFASRDIDLLTQNSPVKRILEDSTI 420 Query: 415 LKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFE 474 LK N K L GI L+G++FD +L SY+L++ +D+ +LA + +T E Sbjct: 421 LKNVFNAKELYVSLKRLGIALKGVSFDLLLVSYLLDTNDNNNDLGALAHDNDYYAVMTDE 480 Query: 475 EIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLV 534 E+ GKG A + + A L + L H+ ++E+IE+PL Sbjct: 481 EVYGKGAKFAIPA--ADADFFEHLGRKAMAINLLREPLLDRLLSHE-QTKLYEDIELPLT 537 Query: 535 PVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQ 594 +L+ +E G+ +D + L +LT RL+ELE+K ++ AG EFN+ S KQL +LFE+ Sbjct: 538 KILADMESTGITVDSEQLLQMRSKLTERLSELEQKIYQQAGHEFNIQSPKQLGVVLFEEM 597 Query: 595 GIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGR 654 P+KKT G STS EVLE++ D P+ + IL YR +AK++STY + L +I+ + Sbjct: 598 KYTPIKKTKTGY-STSVEVLEKMG-DVPIVESILAYRQVAKIQSTYVEGLLRVIHGSDSK 655 Query: 655 VHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQIELRI 713 VHT Y Q +T TGRLSS DPNLQNIPVR EEGR+IR+AF+ D+ I+SADYSQIELR+ Sbjct: 656 VHTRYLQTLTQTGRLSSVDPNLQNIPVRIEEGRQIRKAFVPSHSDWQILSADYSQIELRV 715 Query: 714 MAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLET-VTSEQRRSAKAINFGLIYGMSAFG 772 +AH++ DK L AF G+DIH ATA +FG+ + V RR AKA+NFG++YG+S FG Sbjct: 716 LAHITGDKNLQAAFINGEDIHAATARRIFGIKDDEPVEGNVRRQAKAVNFGIVYGISDFG 775 Query: 773 LARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSN 832 L++ + + RKEA+ ++ YF++YP V ++ + A A+E GYVET+ RR YLPDIK+ Sbjct: 776 LSKNIGVSRKEAKAIIETYFDQYPDVKKWSDDIIASARETGYVETIAHRRRYLPDIKAKR 835 Query: 833 GARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDD 892 R+ AER A+N+P+QG+AADIIK AMI V A ++ + M++QVHDEL+FE + Sbjct: 836 FNARSFAERTAMNSPIQGSAADIIKIAMIKVQAAIEQAGMQAHMLLQVHDELIFEAPASE 895 Query: 893 VDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 + + K + ++M++ +LDVPLLV G +W A Sbjct: 896 MADLEKLVTKVMDSAVKLDVPLLVSSHVGASWYDA 930 >UniRef50_B0S404 DNA polymerase I n=2 Tax=Finegoldia magna RepID=B0S404_FINM2 Length = 875 Score = 888 bits (2295), Expect = 0.0, Method: Composition-based stats. Identities = 306/928 (32%), Positives = 495/928 (53%), Gaps = 63/928 (6%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 +++DGSS L+R ++A LT G T ++G +NM S++ + P V FD K Sbjct: 3 KKALIIDGSSLLFRGFYAIRDLTTKDGIHTNGVFGFMNMYYSVMGKINPDLVVVCFDRKE 62 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 TFR E + YK +R P++L Q + L ++KAMG+ + + G EADD+ GTLA++A Sbjct: 63 PTFRHEKYSEYKGNRQETPEELIGQFDMLKELLKAMGVSYIDLKGYEADDIAGTLAKQAS 122 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLAL 182 V + TGDKD QL+ N ++ T I + + +YG+ P+ +ID L Sbjct: 123 SKDYDVYLLTGDKDYLQLIDDNTKVVLTKRGITETKIYDVDVLKEEYGITPKQMIDLKGL 182 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 MGD SDNIPG+ GVGEKTA +Q G ++ LY ++I+G K K+ +++ Sbjct: 183 MGDKSDNIPGIDGVGEKTALKYIQKYGSIEGLYEHVDEISG------KKTKQKVIDGEDI 236 Query: 243 AYLSYQLATIKTDVE---LELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 AYLS +L TI TDV + E +++ + L+ + K EF + + + + Sbjct: 237 AYLSRELGTINTDVPEDLMGFGIEDCTIKEADNDHLIEVLTKLEFNSFIKKLPNEESNEK 296 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 + + + A T +++ + +E + A E+ Sbjct: 297 FEYENLDEKVDEIKAYIKENKKFTFALFNDDYYVDNEPVIFAIYTDKVYITRNVELVESF 356 Query: 360 SLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQ 419 + S ++ LSF Sbjct: 357 KEEFESKDINKLSF---------------------------------------------- 370 Query: 420 NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 ++K L YGI++ D ++ Y+L+ + M+ + + + E+I GK Sbjct: 371 DIKPCIYHLMRYGIDISYNYDDVVIIEYLLDPSKTSYSMERSDPKVIGYDFKPLEDITGK 430 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 GK++ T + +E Y + T +L+ K+ + + ++++ ++E+PL+ VL Sbjct: 431 GKSKKTILESDEKEIDNYVVKYMMFTNKLYEKISE--IEEEDMMHLYRDVEIPLIKVLCD 488 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 +E GV + + L E + +EK E+ G++ N++S+KQL +LFE + + Sbjct: 489 MEFTGVCVKKETLVEMGELFEDEIKSIEKSVEELIGKKININSSKQLAEVLFEDLELPVI 548 Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 KK G PST +EVLE L+ + + IL YR + KLK+TY D + +I K G++HT++ Sbjct: 549 KKNKTG-PSTDQEVLEALSGRHEIIDYILRYRTITKLKTTYIDGMVDLI-KKDGKIHTTF 606 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSR 719 Q + TGR+SST+PNLQNIP+R EEGR IR+AF+ E +++ ADYSQIELR++A L+ Sbjct: 607 QQTIAQTGRISSTNPNLQNIPIRTEEGRLIRKAFVPSEGNMLLDADYSQIELRVLADLAN 666 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 D+ +L AF G DIHR TA+EVF + + VTS QR +AKA+NFG++YG+ + L++ L+I Sbjct: 667 DEVMLDAFKHGADIHRKTASEVFKVDFDKVTSLQRSNAKAVNFGIVYGIGDYSLSKDLHI 726 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 RKEA++Y++ Y + Y G+ +YME A KE+GYVET+ RR Y+P++KS N R+ Sbjct: 727 TRKEAKEYIENYLDTYKGIKQYMEDIVAIGKEKGYVETIMNRRRYIPELKSKNYNVRSFG 786 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 ER A+N P+QG+AADIIK AM+ L E+ + ++I+QVHDEL+ + KD+ + V + Sbjct: 787 ERVALNTPIQGSAADIIKVAMVKFYNRLNEEKLKAKLILQVHDELIVDCPKDEREKVLEI 846 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWDQA 927 + +M + L V + ++V S +NW A Sbjct: 847 MKDVMTHAVDLKVDMKIDVNSADNWYDA 874 >UniRef50_C5B5N3 DNA polymerase I n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B5N3_METEA Length = 957 Score = 888 bits (2295), Expect = 0.0, Method: Composition-based stats. Identities = 371/962 (38%), Positives = 513/962 (53%), Gaps = 51/962 (5%) Query: 5 PQNPLILVDGSSYLYRAYHAFPPL------TNSAGEPTGAMYGVLNMLRSLIMQ----YK 54 P + LILVD SS+++RAYH S G PTGA L + Sbjct: 9 PGSRLILVDASSFVFRAYHQSLNQDPKYNARPSDGLPTGAARLFFAKLFQFVRDGAAGVV 68 Query: 55 PTHAAVVFDAKGK-TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVE 113 PTH +VFD + + R +L+ YK++R P DLR Q+ + V+A GLP++ + E Sbjct: 69 PTHLGIVFDKGSRESHRRQLYPEYKANRSETPADLRPQMPLVREAVRAFGLPVIELDRTE 128 Query: 114 ADDVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI----------LGPE 163 ADD+I T AR AE G V+I + DKD+ QLV+P I + + + L E Sbjct: 129 ADDLIATYARAAEAKGAEVVIVSADKDLQQLVSPRIRFYDAESGSKGKPGYRPERNLDVE 188 Query: 164 EVVNKY-GVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIA 222 VV K+ G+ P I D LAL+GD+SDNIPGVPG+G KTA LL G L+ L I Sbjct: 189 AVVAKWEGLQPGQIGDALALIGDTSDNIPGVPGIGLKTAAQLLLEYGSLEALLEGASAIK 248 Query: 223 GLSFRGAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKY 282 L E A LS +L + V+L + + L + P L+ K Sbjct: 249 ------QPKRRENLLAAAEGARLSRRLVELDCSVDLPVDPDTLALPAPDGRRLVAYLKAL 302 Query: 283 EF----KRWTADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEET 338 E KR ++ A+ AA P AD D Y + ++ Sbjct: 303 ELPALAKRVAKELGVDADRVPPDAELAASPTTAPGADGPVMPPFPAADPDAYGLVATQDD 362 Query: 339 LKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLD------- 391 L WIA A F L A +GL A+EPG A Y+P+ H Sbjct: 363 LDGWIAAARAAGRFGL-----HLHRGDAGAIGLGIAVEPGRAVYVPIEHRAGGDGLFGGL 417 Query: 392 APDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNS 451 AP QI A + L+ED K+ +LK G E+ G A D L SY L S Sbjct: 418 APGQIDAAAAWGAVGALMEDAGVRKIVHDLKGTAKAAGRLGFEIAG-ADDVGLMSYALES 476 Query: 452 VAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLK 511 H + LA R L + + + G+G+ ++ +A A AA+ AD L+L Sbjct: 477 GLTGHGLPELAARHLGNAAPDPDALRGQGRGRVDAEAVAPRAAAPVAAQIADAVLRLWTV 536 Query: 512 MWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAH 571 + P L+ V+E +E+P+VPVL+R+E GV+ID VL S + LA LE + H Sbjct: 537 LAPRLEGTP-TQAVYEELELPMVPVLARMEAAGVRIDRAVLTELSRDFGATLARLETEIH 595 Query: 572 EIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELAL-DYPLPKVILEY 630 E+ G F + S KQ+ +LF + G+ ++TP G +T +LEELA + LP +L++ Sbjct: 596 ELGGGPFQIGSPKQIGDVLFGRLGLPGGRRTPSGQWATGATILEELAAAGHALPGRLLDW 655 Query: 631 RGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIR 690 R +KLKSTY D L + T RVHT++ A T TGRLSS+DP L NIP+R EEGRRIR Sbjct: 656 RRTSKLKSTYADALLSAADRGTDRVHTTFSLAATTTGRLSSSDPGLHNIPIRTEEGRRIR 715 Query: 691 QAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVT 750 AF+A E + I+SADYSQ+ELR++AH++ + AFAEG DIH ATA+++FG+P+ V Sbjct: 716 AAFVAAEGHRILSADYSQVELRLLAHIADVPRMREAFAEGVDIHAATASDMFGVPVGAVP 775 Query: 751 SEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAK 810 E RR AK INFG++YG+SAFGLA +L I R+EA +++ YFER+PG+ +Y+E T+ + Sbjct: 776 GELRRRAKTINFGIVYGISAFGLADRLGIGRQEAAEFIARYFERFPGIRDYVEGTKTFCR 835 Query: 811 EQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAE 870 E G+V TL GR + P I S N + R ER A+NAP+QGTAADII+RAMI ++ L Sbjct: 836 EHGFVRTLFGRVCHYPGITSGNVSERMGVERQAVNAPIQGTAADIIRRAMIRMEGALADS 895 Query: 871 QPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCT----RLDVPLLVEVGSGENWDQ 926 RM++QVHDELVFEV + + A+ + +M L VPL+VE S ENW++ Sbjct: 896 GLSARMLLQVHDELVFEVAEAECADTARVVSDVMAGAAAPDIDLAVPLVVEARSAENWER 955 Query: 927 AH 928 AH Sbjct: 956 AH 957 >UniRef50_B5RMA2 DNA polymerase I n=2 Tax=Borrelia RepID=B5RMA2_BORDL Length = 922 Score = 883 bits (2283), Expect = 0.0, Method: Composition-based stats. Identities = 328/940 (34%), Positives = 508/940 (54%), Gaps = 38/940 (4%) Query: 7 NPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 + L+D + ++R YH PLTNS GE A G L +I + KP + V FD+ Sbjct: 2 KEIYLIDALNIIFRNYHVMKNNPLTNSKGENVSAFIGFFKTLFFIIKEKKPENLIVTFDS 61 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 + +TFR + + YK+ R PD+L QI + + +P+ + G EADD+I + ++ Sbjct: 62 ETQTFRQKQYPSYKATRDAPPDNLIPQIHWIKEGLIKANIPMFELQGYEADDLIASFTKK 121 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI--LGPEEVVNKYGVPPELIIDFLAL 182 AE+ I + DKD+ QL++ + ++ + + V+ K+G+ I D+L++ Sbjct: 122 AEQNNYLTYIISPDKDLLQLISNQTKIFKIENSSFLEMNNDYVIKKFGINKSQIKDYLSI 181 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 +GD SDNIPG+ G+G+K A LL L+ +Y I L + KE Sbjct: 182 VGDPSDNIPGIKGIGQKGASKLLNEFHTLNGIYENLSLINN-------KYREILLREKEN 234 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADV----------- 291 A+LSY+L ++ D+EL + E + + E+++ LF++Y Sbjct: 235 AFLSYKLISLVEDLELP-SLETFRL-ENLKEDIILLFEEYSATTLIKSYKSLLKKKNIIN 292 Query: 292 ---EAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEK 348 ++ + A S A + Y TIL +E L I +L+K Sbjct: 293 TMQKSIFDINKTKANKENTKDLQSTTLYANTLKTIQEENVKYKTILKKEELDLLIEQLKK 352 Query: 349 APVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPL 408 A A DTET S++ +N++G+S + + + YIP+ + I +E ++ L Sbjct: 353 ASYIAIDTETTSINVYESNIIGISVSFKEFESYYIPIE---TKEKNSIGKEYIIQKFNEL 409 Query: 409 LEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKH 468 + L +GQN K+D +L +G + FDTM+ +Y+++ + +D LA ++L H Sbjct: 410 FNSQPKL-IGQNYKFDYKVLKRHGFNVISAYFDTMIAAYVIDPN-TKVSLDFLAAKYLMH 467 Query: 469 KTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFEN 528 K I +EEI + T I LE A YAAEDAD+T +L + L K ++ +N Sbjct: 468 KNIKYEEIVPQHS---TLKDIPLEIASNYAAEDADITFRLFNILRKKL-KEDNLESLMKN 523 Query: 529 IEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQT 588 IEMP V+ +E NG+ +D L + EL L +E + + G EFNL+S+KQL T Sbjct: 524 IEMPFSNVIIEMEENGIYLDSNYLTQYGHELEQELKTIENEVIQSIGIEFNLNSSKQLHT 583 Query: 589 ILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMI 648 ILFEK I K ST +VLE + + + ++ YR LAKLK+TYTD L I Sbjct: 584 ILFEKLNIIVPKNVK--QDSTDIKVLETIKDQHESIEKLINYRQLAKLKNTYTDNLIEFI 641 Query: 649 NPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQ 708 N KT ++HT++ Q TATGR+SST PNLQNIP++NE GR+IR AF + + +SADYSQ Sbjct: 642 NEKTNKIHTNFIQTKTATGRISSTAPNLQNIPIKNERGRKIRAAFKPTKGNIFISADYSQ 701 Query: 709 IELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGM 768 IEL I+AHLS D+ L+ AF KDIH TA+++F + +T RR AK+INFG+IY M Sbjct: 702 IELVILAHLSEDESLIEAFTHKKDIHIQTASKLFKVDEANITPSMRRIAKSINFGIIYRM 761 Query: 769 SAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDI 828 SAF L+++L+I R+EAQ ++D YF Y + +++ K+ GY ETL RR Y+ +I Sbjct: 762 SAFRLSQELSIKREEAQNFIDSYFNLYSKIKTFIQNQIDFVKQNGYSETLLKRRRYIREI 821 Query: 829 KSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEV 888 S N R AER AIN+ +QG+A+DI+K AMI V + + ++++QVHDE++ E Sbjct: 822 NSQNYLERTGAERMAINSIIQGSASDIMKIAMIKVYNEFKNNNLKSKILLQVHDEMLIES 881 Query: 889 HKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 +++ + I ++MEN L +PL + +G++W H Sbjct: 882 PEEECEKAQIIIKEMMENAYPLKIPLKTNIETGKSWGDIH 921 >UniRef50_C9LLQ0 DNA polymerase I n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLQ0_9FIRM Length = 858 Score = 883 bits (2281), Expect = 0.0, Method: Composition-based stats. Identities = 359/927 (38%), Positives = 494/927 (53%), Gaps = 76/927 (8%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 + L++VDGSS LYRA+ PPL+ G PT A+ G LNML + + P + AV FD Sbjct: 2 EKKLVVVDGSSLLYRAFFGLPPLSYH-GIPTNAVMGFLNMLYDIYKNFDPEYMAVSFDKN 60 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 +TFR E+++ YK+ R P P +L Q + ++ +G + V G E DD++GTLA Sbjct: 61 KQTFRSEVYKEYKATRKPAPPELVPQFALIREALRTLGAAVYEVDGYEGDDILGTLAARY 120 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI----LGPEEVVNKYGVPPELIIDFLA 181 EK PV I TGD+D QL T + T+ T + PE VV KYG+ P +ID A Sbjct: 121 EKE-LPVFIVTGDRDALQLATKDTTVYITQRGVSQMAAMTPEAVVEKYGITPRQVIDMKA 179 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGD+SDNIPGVPGVGEKTA LL LD LY +I G + +L NKE Sbjct: 180 LMGDTSDNIPGVPGVGEKTAAKLLSQYQTLDNLYGHVGEIKG-------AVGKRLAANKE 232 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 +AYLSY+LATIKTDV E E+++ Q EE++ F + +R + Sbjct: 233 LAYLSYRLATIKTDVPFEAALEEMK-QPVHFEEMMEFFHRLGLERIADRYSTLPRFRELA 291 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 + Q + + E K E + Sbjct: 292 VSKKKEIQAAA---------------------VKLEEFPLHPDFTGKEVSLVLHMEGKAP 330 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 + V V +P + + ++ ++ K + E + Sbjct: 331 FYHADLAV---VGYGNHVYRALPERFEDVCMALAAAKHVIVQDSKSIYESD--------- 378 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 GI +D L SY+L + + +AE + G Sbjct: 379 ------FPTEGI----PFYDMTLVSYVLEPTRTTYPLSYMAELF--------------GT 414 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 + + + + EE L L+ + K G ++FE IE PL VL+ +E Sbjct: 415 SPVFPDHLDTEEEKSVCI--CGFLLSLYATSLEHM-KSNGVQSLFEKIENPLAAVLAEME 471 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 + G+ D K EL ++ +L +E AGEEFN++S KQL ILFEK G+ KK Sbjct: 472 KAGIATDQKRWEAVCHELKVQERKLLSLIYEAAGEEFNVNSPKQLGVILFEKMGMPAGKK 531 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 T G ST+ +VLE LA YP K ILEYR ++KL STY + LPL+I P+TGR+HTS++Q Sbjct: 532 TKNGY-STAADVLEMLAKSYPFVKDILEYRTISKLISTYLEALPLLIRPETGRIHTSFNQ 590 Query: 662 AVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY-VIVSADYSQIELRIMAHLSRD 720 VTATGRLSS+DPNLQNIPVR EGR+IR F+ Y +S+DYSQ+ELR++AH+S D Sbjct: 591 TVTATGRLSSSDPNLQNIPVRTAEGRQIRSLFVPGPGYDCFISSDYSQVELRVLAHMSGD 650 Query: 721 KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 + L+ AF +DIHR TAAEV G+P E VTSEQR AKA+NFG+IYG+S FGLA QL I Sbjct: 651 ESLIRAFRNKEDIHRRTAAEVLGIPFEEVTSEQRSHAKAVNFGIIYGISDFGLANQLGIS 710 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 R EA Y+ YFERYP + +M+ A+E G +TL GR LPDI+SSN RR+ AE Sbjct: 711 RGEAGTYIKKYFERYPYIHAFMKSMVEDAQESGRAKTLFGRYRELPDIRSSNFNRRSFAE 770 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 R A+N P+QGTAADI+K AMI V ++ E + R+++QVHDELV E ++ + + + Sbjct: 771 RTAMNTPIQGTAADIMKLAMIEVSRRIKEEGYKSRVLLQVHDELVVEAVSEEKENLKTLL 830 Query: 901 HQLMENCTRLDVPLLVEVGSGENWDQA 927 + ME+ L VPL+ +V G+NW +A Sbjct: 831 KETMESVVELKVPLIADVHEGKNWAEA 857 >UniRef50_Q1JIU7 DNA polymerase I n=14 Tax=Streptococcus RepID=Q1JIU7_STRPD Length = 880 Score = 883 bits (2281), Expect = 0.0, Method: Composition-based stats. Identities = 337/936 (36%), Positives = 501/936 (53%), Gaps = 74/936 (7%) Query: 6 QNPLILVDGSSYLYRAYHAFPP----LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 +N L+L+DGSS +RA+ A N +G T A+YG ML ++ + +PTH V Sbjct: 4 KNKLLLIDGSSVAFRAFFALYNQIDRFKNHSGLHTNAIYGFHLMLDHMMKRVQPTHVLVA 63 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 FDA TFR E++ YK+ R PD+ R Q + M+ A+G+ + EADD+IGTL Sbjct: 64 FDAGKTTFRTEMYADYKAGRAKTPDEFREQFPYIREMLTALGIAYYELEHYEADDIIGTL 123 Query: 122 AREAEKAG--RPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPEL 175 + AE+ V I +GDKD+ QL N + + P ++ K G+ P Sbjct: 124 DKMAERTEVPFDVTIVSGDKDLIQLTDENTVVEISKKGVAEFEEFTPAYLMEKMGLTPNQ 183 Query: 176 IIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAK 235 ID ALMGD SDNIPGV +GEKT LL G L+ +Y + A M Sbjct: 184 FIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEFGSLEGIYEHIDGFK------ASKMKEN 237 Query: 236 LEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGK 295 L +++ A+LS LATI T + + + + P L + + +F + + + Sbjct: 238 LINDRDQAFLSKTLATINTASPITIGLDDIVYNGPDVASLSQFYDEMDFVQLKKGLASQM 297 Query: 296 WLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFD 355 PQE A EVT + I F Sbjct: 298 ------------PQEPVAAISYQEVTNVSADLFSAEDI--------------------FY 325 Query: 356 TETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKAL 415 ET + ++G ++ + A + D+ Q+ + Sbjct: 326 FETLRDNYHREAIIGFAWGHGEQIYASTDLGLLATDSFKQV---------------FQKP 370 Query: 416 KVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEE 475 + K + +L++ GIEL ++D L +Y+L S +++ ++A + + Sbjct: 371 IATYDFKRSKVLLSHLGIELVAPSYDARLANYLL-STVEDNELSTIARIFTDISLEEDDT 429 Query: 476 IAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVP 535 + GKG + ++ + + A V L +M L H+ L++++NIE+PL Sbjct: 430 VYGKGAKRAVPDK---DVLLEHLARKVKVLLDSKSQMLDKLTAHE-QLDLYQNIELPLAN 485 Query: 536 VLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG 595 VL+++E G+K++ L + +E+ + + L ++ +++AG+EFN++S KQL +ILFEK Sbjct: 486 VLAKMEIEGIKVNRATLQDMAEQNKVIIEALTQEIYDMAGQEFNINSPKQLGSILFEKMQ 545 Query: 596 IK--PLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTG 653 + KKT G ST+ +VLE LA P+ IL+YR + KL+STY L I G Sbjct: 546 LPLEMTKKTKTGY-STAVDVLERLAPIAPIVAKILDYRQITKLQSTYVIGLQDYILA-DG 603 Query: 654 RVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQIELR 712 ++HT Y Q +T TGRLSS DPNLQNIP+R E+GR IR+AF ED V++S+DYSQIELR Sbjct: 604 KIHTRYVQDLTQTGRLSSVDPNLQNIPIRLEQGRLIRKAFTPSHEDAVLLSSDYSQIELR 663 Query: 713 IMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLE-TVTSEQRRSAKAINFGLIYGMSAF 771 ++AH+S D+ L+ AF EG DIH +TA VFG+ VT+ RR+AKA+NFG++YG+S F Sbjct: 664 VLAHISGDEHLIAAFNEGADIHTSTAMRVFGIDKAADVTANDRRNAKAVNFGIVYGISDF 723 Query: 772 GLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSS 831 GL+ L I RK+A+ Y+D YFERYPG+ YME +AK++GYVETL RR LPDI S Sbjct: 724 GLSNNLGITRKQAKSYIDTYFERYPGIKAYMENVVREAKDKGYVETLFKRRRELPDINSR 783 Query: 832 NGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKD 891 N R+ AER AIN+P+QG+AADI+K AMI +D LQA R +M++QVHDE+V EV D Sbjct: 784 NFNVRSFAERTAINSPIQGSAADILKIAMINLDKALQAGGFRAKMLLQVHDEIVLEVPND 843 Query: 892 DVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 ++ A+ K + ME L VPL V+ +G++W +A Sbjct: 844 ELTAIKKLVKDTMEAAVDLAVPLCVDESTGQSWYEA 879 >UniRef50_P52028 DNA polymerase I, thermostable n=18 Tax=Bacteria RepID=DPO1T_THET8 Length = 834 Score = 882 bits (2280), Expect = 0.0, Method: Composition-based stats. Identities = 327/924 (35%), Positives = 490/924 (53%), Gaps = 102/924 (11%) Query: 5 PQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 P+ ++LVDG YR + A LT S GEP A+YG L + + VVFDA Sbjct: 10 PKGRVLLVDGHHLAYRTFFALKGLTTSRGEPVQAVYGFAKSLLKALKEDGYKAVFVVFDA 69 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 K +FR E +E YK+ R P P+D Q+ + +V +G L V G EADDV+ TLA++ Sbjct: 70 KAPSFRHEAYEAYKAGRAPTPEDFPRQLALIKELVDLLGFTRLEVPGYEADDVLATLAKK 129 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMG 184 AEK G V I T D+D+ QLV+ + +++ ++ PE + KYG+ PE +DF AL+G Sbjct: 130 AEKEGYEVRILTADRDLYQLVSDRVAVLHP-EGHLITPEWLWEKYGLRPEQWVDFRALVG 188 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 D SDN+PGV G+GEKTA LL+ G L+ L +++ + + K++ + E Sbjct: 189 DPSDNLPGVKGIGEKTALKLLKEWGSLENLLKNLDRVK------PENVREKIKAHLEDLR 242 Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304 LS +L+ ++TD+ LE+ Q ++P E L ++ EF + G Sbjct: 243 LSLELSRVRTDLPLEVDLAQ--GREPDREGLRAFLERLEFGSLLHEF---------GLLE 291 Query: 305 AAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNI 364 A P E + PE + + Sbjct: 292 APAPLEEAPWP-PPEGAFVGFVLSR-------------------------------PEPM 319 Query: 365 SANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYD 424 A L L+ + V A D ++ + L+ ++ LL K Sbjct: 320 WAELKALAACRDGRVHR----------AADPLAGLKDLKEVRGLL-----------AKDL 358 Query: 425 RGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQL 484 + + G++L D ML +Y+L+ + +A R+ Sbjct: 359 AVLASREGLDLV-PGDDPMLLAYLLDPSNTTP--EGVARRYGG----------------- 398 Query: 485 TFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNG 544 E AA A ++ +LH + L+ + L ++ +E PL VL+ +E G Sbjct: 399 --------EWTEDAAHRALLSERLHRNLLKRLEGEEKLLWLYHEVEKPLSRVLAHMEATG 450 Query: 545 VKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT-P 603 V++D L S EL + LE++ +AG FNL+S QL+ +LF++ + L KT Sbjct: 451 VRLDVAYLQALSLELAEEIRRLEEEVFRLAGHPFNLNSRDQLERVLFDELRLPALGKTQK 510 Query: 604 GGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAV 663 G STS VLE L +P+ + IL++R L KLK+TY D LP +++P+TGR+HT ++Q Sbjct: 511 TGKRSTSAAVLEALREAHPIVEKILQHRELTKLKNTYVDPLPSLVHPRTGRLHTRFNQTA 570 Query: 664 TATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGL 723 TATGRLSS+DPNLQNIPVR G+RIR+AF+A + +V+ DYSQIELR++AHLS D+ L Sbjct: 571 TATGRLSSSDPNLQNIPVRTPLGQRIRRAFVAEAGWALVALDYSQIELRVLAHLSGDENL 630 Query: 724 LTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKE 783 + F EGKDIH TA+ +FG+P E V RR+AK +NFG++YGMSA L+++L IP +E Sbjct: 631 IRVFQEGKDIHTQTASWMFGVPPEAVDPLMRRAAKTVNFGVLYGMSAHRLSQELAIPYEE 690 Query: 784 AQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAA 843 A +++ YF+ +P V ++E+T + +++GYVETL GRR Y+PD+ + + R AAER A Sbjct: 691 AVAFIERYFQSFPKVRAWIEKTLEEGRKRGYVETLFGRRRYVPDLNARVKSVREAAERMA 750 Query: 844 INAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQL 903 N P+QGTAAD++K AM+ + L+ + RM++QVHDEL+ E + + VA + Sbjct: 751 FNMPVQGTAADLMKLAMVKLFPRLR--EMGARMLLQVHDELLLEAPQARAEEVAALAKEA 808 Query: 904 MENCTRLDVPLLVEVGSGENWDQA 927 ME L VPL VEVG GE+W A Sbjct: 809 MEKAYPLAVPLEVEVGMGEDWLSA 832 >UniRef50_Q30R59 DNA polymerase A n=6 Tax=Epsilonproteobacteria RepID=Q30R59_SULDN Length = 902 Score = 880 bits (2273), Expect = 0.0, Method: Composition-based stats. Identities = 328/928 (35%), Positives = 508/928 (54%), Gaps = 38/928 (4%) Query: 7 NPLILVDGSSYLYRAYHAFP-PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 + ++D + +R+++A P L NS G PTG + G N + +L Q+ + D K Sbjct: 3 KTVTIIDTFGFFFRSFYALPQHLKNSQGFPTGLLTGFTNFISTLQKQHDSDYIVFAIDTK 62 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 G +FR E+ +YK++R P P +L Q+ + MG L G EADDVI T+ R A Sbjct: 63 GDSFRKEIDPNYKANRQPPPQELSMQLPIAIEWIDKMGYKTLGFDGYEADDVIATVVRFA 122 Query: 126 EKAGRPVLISTGDKDMAQLVTP-NITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMG 184 ++ V + + DKD+ QL+ + L++ + ++ +E KYG+ P+ ID+ +++G Sbjct: 123 KEKSYNVRVVSHDKDLFQLIDDGRVVLVDAIKKQVMDEDECFKKYGISPKQFIDYQSILG 182 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 DS+DNIPGV G+G+ A+ LL LD +YA E I L + KL + KE AY Sbjct: 183 DSADNIPGVKGIGKVGAEKLLIEYETLDNIYANIENIKPLG------IQKKLLEFKEQAY 236 Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAE-ELLGLFKKYEFKRWTADVEAGKWLQAKGAK 303 +S +L T+ V E+ ++ + KYE + A + + K Sbjct: 237 MSKKLVTLSCSVFESFDFEEFKMDIENPFLNIYDELVKYEQNGILRALNAKNLVHVEAVK 296 Query: 304 PAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDN 363 +T+ V I D + LK +++L + AFDTET LD Sbjct: 297 KVEAEAQTNKKVNF-----------RAVLIDDAKELKRVLSELRDDTIVAFDTETTGLDY 345 Query: 364 ISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKY 423 + +LVG SF A Y+P+AH YL +QIS+E A +K + VG N+K+ Sbjct: 346 ENDSLVGFSFCFNEDEAYYVPIAHFYLGVGEQISQEDAKIAIKKIFNS---RVVGHNIKF 402 Query: 424 DRGILAN-YGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 D + G I D+M+ ++++N +D L+E+ L+HK ITF+E KG+ Sbjct: 403 DLHFVIRFLGEGELDIFADSMILAWLINP-ESALSLDKLSEKLLEHKMITFKESVKKGE- 460 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFE---NIEMPLVPVLSR 539 TF +ALEEA YAAEDA +TL+L+ ++ ++ K +G ++ E +E P + L + Sbjct: 461 --TFASVALEEACNYAAEDAYITLRLYY-LFLEMLKDQGAEHLIEEAKEVEFPFIKTLLK 517 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 +E +G++++ L E L+EL KK +E+A EFN++ST+QL +LFE+ G+ Sbjct: 518 MEMHGIELNSLFLEQFLAEAKDSLSELTKKIYELASLEFNINSTQQLGNVLFEQLGLPTS 577 Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLM-INPKTGRVHTS 658 KKT G ST E+VL L ++ + +LEYR + KL STY + L + K R+HTS Sbjct: 578 KKTKTGY-STDEKVLNSLLGEHEIIPYLLEYREVYKLYSTYIEPLLKLSQQDKESRIHTS 636 Query: 659 YHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLS 718 + Q T TGRLSS +PNLQNIP R G +IR+AF+APE ++ DYSQIELR++AH + Sbjct: 637 FVQTGTTTGRLSSKNPNLQNIPTRTALGTKIREAFVAPEGKKLIGIDYSQIELRLLAHFT 696 Query: 719 RDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLN 778 +D+ L+ AF + KDIH TA +FG E +R AK +NFGL+YGM L+ L Sbjct: 697 QDRVLVEAFMQDKDIHMQTAIALFG---EEDAPLKRNVAKTVNFGLLYGMGQKKLSETLK 753 Query: 779 IPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAA 838 I EA++ ++ YF +P V Y +KE GYVETL RR Y D +S++ RAA Sbjct: 754 ITTAEAKEIIERYFSSFPSVKSYFRSIVDFSKEAGYVETLLKRRRYF-DYESASPMFRAA 812 Query: 839 AERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAK 898 ER A+N+ QG+A+DIIK +M + ++ E+ +M++Q+HDEL+FEV + + + + Sbjct: 813 YEREAVNSIFQGSASDIIKLSMNKIHKLIEDEKLNAKMLLQIHDELIFEVDTSEAEILGE 872 Query: 899 QIHQLMENCTRLDVPLLVEVGSGENWDQ 926 + +M+N L++PL + G+ W + Sbjct: 873 KFKNIMQNIMPLNIPLKASMKIGDKWSE 900 >UniRef50_Q3AZ16 DNA polymerase A n=12 Tax=Chroococcales RepID=Q3AZ16_SYNS9 Length = 998 Score = 879 bits (2272), Expect = 0.0, Method: Composition-based stats. Identities = 368/1002 (36%), Positives = 525/1002 (52%), Gaps = 85/1002 (8%) Query: 3 QIPQNPLILVDGSSYLYRAYHAFPP-----LTNSAGEPTGAMYGVLNMLRSLIMQYKPTH 57 + + L+LVDG S +R+++AF L G PT YG L L +KP Sbjct: 4 AVTKPLLLLVDGHSLAFRSFYAFSKGGEGGLATKDGRPTSVTYGFLKSLLDTGKTFKPQG 63 Query: 58 AAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMV-KAMGLPLLAVSGVEADD 116 A+ FD TFR + +YK+HR P+ +E L ++ M LPL G EADD Sbjct: 64 VAIAFDTAEPTFRHKADTNYKAHRDVAPEVFFQDLEQLQQILSDQMKLPLCMAPGYEADD 123 Query: 117 VIGTLAREAEKAGRPVLISTGDKDMAQLVT--PNITLINTMTN--------TILGPEEVV 166 V+GTLA A AG V I +GD+D+ QLV +I ++ T++ + VV Sbjct: 124 VLGTLANRAADAGWGVRILSGDRDLFQLVDNSRDIAVLYMGGGPYAKGSGPTLIQEDGVV 183 Query: 167 NKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSF 226 +K GV P+ ++D AL GDSSDNIPGV GVG KTA LL+ LD +YA ++ Sbjct: 184 SKLGVMPDKVVDLKALTGDSSDNIPGVRGVGPKTAINLLKDNIDLDAVYATLAEVEAEGP 243 Query: 227 RGAK-----TMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKK 281 + ++ + KL +++ AYLS LA I D+ L E L +QQ AE L + Sbjct: 244 KASRGAIKGALVGKLRSDRDNAYLSRMLAEILVDIPLPKDPE-LGLQQVDAEGLSDRLED 302 Query: 282 YEFKRWTADVEAGKWLQAKG------AKPAAKPQETSVADEAPEVTATVISYDNYV---- 331 E V + G + A K + S A P+ T+++ S Sbjct: 303 LELNSLVRQVGGFVATFSTGGYGANASSEAEKTPKRSPAKTNPDSTSSIGSAAAPQQGSG 362 Query: 332 -------------TILDEETLKAWIAKLEK----APVFAFDTETDSLDNISANLVGLSFA 374 I E L+A + +L A DTET L+ A LVG+ Sbjct: 363 EAEVGAIPPLQPQLIESNEALQALVQRLMDCTDPKAPIAVDTETTDLNPFKAELVGVGVC 422 Query: 375 IEPGVAA--YIPVAHD------YLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRG 426 A YIP+ H P Q+ E L L P L + K QN KYDR Sbjct: 423 WGEANDALAYIPIGHKPPSELSEATPPQQLPLETVLMALSPWLASPQHPKALQNAKYDRL 482 Query: 427 ILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTF 486 IL +G+ L G+ DT+L Y+ ++ A +H +D ++ER + T+ ++ GK + TF Sbjct: 483 ILLRHGLTLNGVVIDTLLADYLRDAAA-KHGLDLMSEREFGFRPTTYGDLVGK---KQTF 538 Query: 487 NQIALEEAGRYAAEDADVTLQLHLKMWPDLQKH-KGPLNVFENIEMPLVPVLSRIERNGV 545 +A+E A Y D VT +L L++ LQ L + E +E PL PVL+++E G+ Sbjct: 539 ADVAIEPASLYCGMDVHVTRRLALQLRQTLQAMGPQLLPLLEGVEQPLEPVLAQMEATGI 598 Query: 546 KIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG--IKPLKKTP 603 +ID L S+EL L LE A ++A +FNL+S KQL +LF+ G K ++T Sbjct: 599 RIDVPYLKTLSDELGSTLNRLETDAKQVAEVDFNLASPKQLGELLFDTLGLDRKKSRRTK 658 Query: 604 GGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAV 663 G ST VLE+L D+P+ ++LE+R L+KLKSTY D LP ++ +TGRVHT ++QAV Sbjct: 659 TG-FSTDATVLEKLENDHPVVPLVLEHRVLSKLKSTYVDALPQLVEAETGRVHTDFNQAV 717 Query: 664 TATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGL 723 TATGRLSS++PNLQNIPVR E RRIR+AF+ E + ++SADYSQIELRI+ HLS ++ L Sbjct: 718 TATGRLSSSNPNLQNIPVRTEYSRRIRKAFLPQEGWTLLSADYSQIELRILTHLSGEEVL 777 Query: 724 LTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKE 783 A++ G D+H TA + + V++++RR K INFG+IYGM A AR+ + E Sbjct: 778 QEAYSTGDDVHALTARLLL--DKDDVSADERRLGKTINFGVIYGMGAQRFARETGVSSAE 835 Query: 784 AQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIK-------------- 829 A++++ Y +RYP V ++E A +GYVET+ GRR + Sbjct: 836 AKEFLTKYKQRYPKVFAFLELQERLALSRGYVETILGRRRPFHFDRNGLGRLLGKDPLEI 895 Query: 830 ----SSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELV 885 + G A RAA NAP+QG++ADIIK AM+ + A L ++ R+++QVHDELV Sbjct: 896 DLDVARRGGMEAQQLRAAANAPIQGSSADIIKVAMVQLQAVLLSQGIPARLLLQVHDELV 955 Query: 886 FEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 EV D +D + MEN +L VPL+VE G G +W +A Sbjct: 956 LEVAPDALDTTRNLVVNTMENAVKLSVPLVVETGVGRDWMEA 997 >UniRef50_A2C810 DNA polymerase I n=16 Tax=Cyanobacteria RepID=A2C810_PROM3 Length = 986 Score = 878 bits (2270), Expect = 0.0, Method: Composition-based stats. Identities = 359/993 (36%), Positives = 515/993 (51%), Gaps = 74/993 (7%) Query: 1 MVQIPQNPLIL-VDGSSYLYRAYHAFPP-----LTNSAGEPTGAMYGVLNMLRSLIMQYK 54 M + PL+L VDG S +R+++AF L G PT YG L L Sbjct: 1 MPEAANKPLLLLVDGHSLAFRSFYAFSKGGEGGLATKDGTPTSVTYGFLKALLDNCKGLS 60 Query: 55 PTHAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKA-MGLPLLAVSGVE 113 P + FD TFR + +YK++R PD ++ L +++ + LPL G E Sbjct: 61 PQGIVIAFDTAEPTFRHQADVNYKANRDVAPDIFFQDLKQLQEILENNLQLPLCLAPGYE 120 Query: 114 ADDVIGTLAREAEKAGRPVLISTGDKDMAQLVTP--NITLINTMTN--------TILGPE 163 ADDV+GTLA +A + G V I +GD+D+ QLV +I ++ +++ Sbjct: 121 ADDVLGTLANQASRDGWGVRILSGDRDLFQLVDDQRDIAVLYMGGGPYAKSSGPSLIDEA 180 Query: 164 EVVNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKI-- 221 V++K GV P +++ AL GDSSDNIPGV GVG KTA LL+ G LD +Y ++ Sbjct: 181 GVLSKLGVIPNKVVELKALTGDSSDNIPGVKGVGPKTAITLLKENGDLDGIYNALAEVEA 240 Query: 222 ---AGLSFRGAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGL 278 + +KL +++ AYLS LA I D+ L +LE+ + L Sbjct: 241 EGEKASRGAIKGALKSKLSNDRDNAYLSLHLAEILVDIPLPKAP-RLELGSVDNDGLTDR 299 Query: 279 FKKYEFKRWTADVEAGKWLQAKG-----------AKPAAKPQETSVADEAPEVTATVISY 327 E V + + G +K A P E + E Sbjct: 300 LSSLELNSLVRQVPSFVATFSSGGFKANRHELEPSKSATSPVEPESSTETKVSNDNEQPA 359 Query: 328 DNYVTILDEETLKAWIAKL----EKAPVFAFDTETDSLDNISANLVGLSFAIEPGVA--A 381 I + E L+ + +L ++ A DTET +L+ A LVGL G+ A Sbjct: 360 LEPQLITNPEELQELVKRLMGYRDRLKPVALDTETTALNPFCAELVGLGVCWGEGLQDLA 419 Query: 382 YIPVAHD------YLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIEL 435 YIP+ H +A Q+ E L+ + P L K QN KYDR IL +G+ L Sbjct: 420 YIPIGHHPPAELLEAEAACQLPLEAVLKAIAPWLASNDHPKALQNAKYDRLILLRHGLAL 479 Query: 436 RGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAG 495 G+ DT+L Y+ ++ A +H ++ +AER K F E+ GKG+ TF +A+ A Sbjct: 480 EGVVMDTLLADYLRDAAA-KHGLEVMAEREFKITPTGFSELVGKGQ---TFADVAIPTAS 535 Query: 496 RYAAEDADVTLQLHLKMWPDLQKHK-GPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHN 554 Y D +T +L L++ L+ L + E +E PL PVL+ +E G++ID L Sbjct: 536 LYCGMDVHLTRRLALRLRAQLEDMGAKLLPLLEQVEQPLEPVLALMEATGIRIDLPYLQT 595 Query: 555 HSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG--IKPLKKTPGGAPSTSEE 612 S EL L LE++A E AG +FNL+S KQL +LFE G K ++T G ST Sbjct: 596 LSVELGETLERLEEQAREAAGVDFNLASPKQLGELLFETLGLNRKKSRRTKTGW-STDAN 654 Query: 613 VLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSST 672 VLE+L D+P+ ++LE+R L+KL+STY D LP ++ +TGRVHT ++QAVTATGRLSS+ Sbjct: 655 VLEKLEADHPVVPLVLEHRVLSKLRSTYVDALPQLVESETGRVHTDFNQAVTATGRLSSS 714 Query: 673 DPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKD 732 +PNLQNIP+R E RRIR+AF+ E++ ++SADYSQIELRI+ HLS ++ L AF G D Sbjct: 715 NPNLQNIPIRTEFSRRIRKAFLPQENWQLLSADYSQIELRILTHLSGEEVLQEAFRNGDD 774 Query: 733 IHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYF 792 +H TA + + V+S++RR K INFG+IYGM A AR + + EA+ ++ Y Sbjct: 775 VHALTARLLL--DKDEVSSDERRLGKTINFGVIYGMGAQRFARSTGVSQAEAKDFLSRYK 832 Query: 793 ERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIK------------------SSNGA 834 +RY V ++E A +GYVETL GRR + + G Sbjct: 833 QRYAKVFTFLELQERLALSEGYVETLLGRRRPFHFDRNGLGRLLGKDPMDIDLDVARRGG 892 Query: 835 RRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVD 894 A RAA NAP+QG++ADIIK AM+ + L A R+++QVHDELV EV ++ Sbjct: 893 MEAQQLRAAANAPIQGSSADIIKVAMVQLQEKLTAADLPARLLLQVHDELVLEVDPTALE 952 Query: 895 AVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 V + + Q ME L VPL+VE G G+NW +A Sbjct: 953 DVQQLVVQTMEKAVELSVPLVVETGIGDNWMEA 985 >UniRef50_C4GAN0 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GAN0_9FIRM Length = 910 Score = 878 bits (2270), Expect = 0.0, Method: Composition-based stats. Identities = 331/930 (35%), Positives = 501/930 (53%), Gaps = 32/930 (3%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 Q+ L+L+DG S L RA++ P LTNS G+ T A+YG LN+L + + KP H V FD Sbjct: 4 QSKLLLIDGHSILNRAFYGLPDLTNSKGQHTNAVYGFLNILFKTMEEEKPDHLTVAFDLS 63 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 TFR +F YK R PM +LR Q+ + M+ AMG+ L+ G+EADD++GT+++ Sbjct: 64 APTFRHRMFADYKGTRKPMAAELREQVPMIKEMLAAMGICLVTKEGLEADDLLGTMSKIG 123 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNT------ILGPEEVVNKYGVPPELIIDF 179 E AG V I +GD+D+ QL T + ++ T ++V Y V P ID Sbjct: 124 EAAGMDVTILSGDRDLLQLATDKVKIMIPKTKKGGTETESYYAKDVRETYQVSPTEFIDV 183 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 AL GD++DNIPGVPG+GEKTA ++ G ++ + E + A + Sbjct: 184 KALWGDTADNIPGVPGIGEKTAINIIAAYGSIEAAHEHAEDLK------PPRAARNIVDF 237 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 + A LS LATI +++ ++ ++ L K + FK + + Sbjct: 238 WDQARLSKTLATIDVHAKIDYDLAAAQIGNIFTDDAYRLCKDWGFKNILLRFDKESVDRE 297 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 + + TS + S + ++ A+ + A E Sbjct: 298 EKDLTSRFSHLTSRTAFEEMIERAGQSQETWIGA-GLFLKDHSAARAGQIRALAISFEGK 356 Query: 360 SLDNISANLVGLSFAIEPGVAAYIPV-AHDYLDAPDQISRERALELLKPLLEDEKALKVG 418 + FA A + + + D + + L L D Sbjct: 357 AF-----------FAEADTEARQLSLFGSEADDGSGDLIQSTDLRRGLQALADAGKNLAF 405 Query: 419 QNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAG 478 +LK L+ RG +FD + +Y+L+ ++ + + +A L ++ E G Sbjct: 406 LDLK---EALSQLSFSDRGRSFDLQVAAYLLDPLSSSYPTEDIARDQLALSIPSYSEFFG 462 Query: 479 KGK-NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVL 537 K K +Q+ + +E YA A V + K+ L + +G ++E +E+PLV L Sbjct: 463 KKKADQIWEDPEEVEHRMHYACYQAYVASRAPQKLLKRL-EEQGMRALYEEVELPLVYTL 521 Query: 538 SRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIK 597 +E G+ ++ + L ++ ++L R+ ELE+ + AGE FN++S KQL +LF + G+ Sbjct: 522 YDMETAGIAVEKEALKSYGDQLVGRINELEEGIYREAGETFNINSPKQLGEVLFGQLGLP 581 Query: 598 PLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHT 657 +KT G ST+ +VL+ LA++Y + + +LE+R L KLKSTY D L +I GR+H+ Sbjct: 582 GARKTKTGY-STAADVLDPLAVNYQIVRDVLEFRQLTKLKSTYADGLAKVI-ADDGRIHS 639 Query: 658 SYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHL 717 S+ Q VTATGRLSST+PNLQNIP+R E G+ IR+ F A E V V +DYSQIELR++AHL Sbjct: 640 SFQQTVTATGRLSSTEPNLQNIPIRMELGKEIRRVFPAMEGCVFVDSDYSQIELRVLAHL 699 Query: 718 SRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQL 777 S+D L+ A+ +GKDIHRATA+ VF P E VT +QR +AKA+NFG++YG+SAFGLA+ L Sbjct: 700 SQDPKLIEAYRQGKDIHRATASLVFHTPFEEVTDQQRSNAKAVNFGIVYGISAFGLAKDL 759 Query: 778 NIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRA 837 I R+EAQ+Y+D YF YP + +Y++ A+++GY TL GRR +P++K+SN +R Sbjct: 760 GISREEAQEYIDGYFAAYPRLHDYLDGLVEFARKEGYAVTLFGRRRPVPELKNSNFMQRQ 819 Query: 838 AAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVA 897 ER A+NAP+QGTAADIIK AM+ V L E R R+I+ VHDEL+ E + + V Sbjct: 820 FGERVAMNAPVQGTAADIIKIAMVRVHDRLAKEGLRSRLILTVHDELLVETFEQEEQEVR 879 Query: 898 KQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 + + Q M +L V L ++ SG NW A Sbjct: 880 EILDQEMRGAAQLSVELEIDTHSGRNWYDA 909 >UniRef50_C8PHS8 DNA polymerase I n=2 Tax=Campylobacter RepID=C8PHS8_9PROT Length = 938 Score = 878 bits (2268), Expect = 0.0, Method: Composition-based stats. Identities = 326/959 (33%), Positives = 499/959 (52%), Gaps = 65/959 (6%) Query: 8 PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 + ++D + +R Y+A L G+P+G + G + + +L ++K + D+KGK Sbjct: 3 TITIIDTFGFFFRLYYAMSGLKTKDGKPSGMVSGFASFIANLSKEFKSDYIIFALDSKGK 62 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 TFR ++ +YK++R P L Q+ M++ MGL L G EADD+I ++ ++ Sbjct: 63 TFRSDIDPNYKTNRQAPPPALLQQLPVCIEMIEKMGLYSLGREGYEADDLIASVVKKY-G 121 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSS 187 A + I T DKD+ QL+ N+ + + + G EE + +YGV PE I+DFLA+ GDS+ Sbjct: 122 ATHKINIVTSDKDLYQLIGENVKIYSHGKKMLYGREECLQRYGVYPEQIVDFLAICGDSA 181 Query: 188 DNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSY 247 DNIPGV G+G+K A+ LL G LD +Y+ +++ L + K+ AY+S Sbjct: 182 DNIPGVRGIGDKGAKKLLDEWGSLDEIYSNLDRLP------QNKQREYLIEGKQSAYISK 235 Query: 248 QLATIKTDVELELTCEQLEVQQPAA-EELLGLFKKYEFKRWTADVEAGKWLQAK------ 300 +LAT+ ++E+ E + Q ++ + K Y R + + + Sbjct: 236 RLATLYDELEIP-PLEDAKFPQQNPLFKIREILKDYALNRLLSALSLQEQNGLDLWGEGK 294 Query: 301 -------------------------------GAKPAAKPQETSVADEAPEVTATVISYDN 329 G A + + Sbjct: 295 GAGAKSSVLGAGGKGAGAESSRGGSILGAAVGGLDGQNSIPGGSACSEKNSESAFKTPFE 354 Query: 330 YVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDY 389 + I D L ++ + +FDTET S+D+ SA +VG SFA A Y+P+AH Y Sbjct: 355 PICITDAVELARLCESIDAETLVSFDTETTSIDSKSAKIVGFSFAFNEERAYYVPLAHSY 414 Query: 390 LDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILAN-YGIELRGIAFDTMLESYI 448 L AP QIS + A + L VGQNLKYD I+ N + IE DTM+ +++ Sbjct: 415 LGAPAQISSDAAKAAIDSLFRGY---VVGQNLKYDFEIVKNNFNIEPPARFADTMVLAWL 471 Query: 449 LNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQL 508 L+ A MDS++ R+L ++T+ F ++ KG+ TF + L+ A YA+EDA VTL+L Sbjct: 472 LDP-ANAVGMDSISPRYLGYETVHFGDVVKKGE---TFASVELDAATIYASEDAWVTLRL 527 Query: 509 HLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEK 568 + K+ L + + +E P V VL +++R G+KID +++ L L Sbjct: 528 YFKLKGLL--EPALFKLAQELEFPFVRVLWQMQRCGIKIDVEMIKRLIGRNEKSLRALTD 585 Query: 569 KAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVIL 628 + +E+ GE+FN++S QL +LFE+ G+ K+T G ST E VL++L +P IL Sbjct: 586 EIYELCGEQFNINSPAQLGAVLFERLGLPAAKRTKTGY-STDESVLKDLTALHPAVGKIL 644 Query: 629 EYRGLAKLKSTYTDKL-PLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGR 687 +YR L KL+STY + L L + RV +++ Q TATGRL+S +PNLQNIP R + Sbjct: 645 DYRELFKLQSTYCEPLLQLALADAQNRVRSNFLQTGTATGRLASKNPNLQNIPARGTFAK 704 Query: 688 RIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLE 747 +R F+A Y ++S DYSQIELR++AH SRD LL AF +DIH TA +FG Sbjct: 705 NVRDCFLAEGGYSLISLDYSQIELRLLAHFSRDPALLAAFRADEDIHARTAISIFG---- 760 Query: 748 TVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRA 807 R AK+INFGLIYGM A L+ L I R EA+ Y++ YF + + E+++ ++ Sbjct: 761 DAQPAHRTIAKSINFGLIYGMGAGKLSDSLGIARAEAKGYIERYFAAFSTIKEFLQSIKS 820 Query: 808 QAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWL 867 AK GYV TL GRR Y + N A+ ER A+N QG+AADIIK+AM+ + L Sbjct: 821 DAKADGYVSTLFGRRRYFDFANARNNMVYASYEREAVNTKFQGSAADIIKKAMVDISPLL 880 Query: 868 QAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 E R+I+Q+HDEL+FEV D + ++M++ L+VPL + + W + Sbjct: 881 NGE---ARLILQIHDELIFEVRDDLAQGFGARAQEIMQSAASLNVPLKTSLNIAKRWGE 936 >UniRef50_B4U0B7 DNA polymerase I n=5 Tax=Streptococcus RepID=B4U0B7_STREM Length = 899 Score = 878 bits (2268), Expect = 0.0, Method: Composition-based stats. Identities = 349/936 (37%), Positives = 506/936 (54%), Gaps = 74/936 (7%) Query: 6 QNPLILVDGSSYLYRAYHAFPP----LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 +N L+L+DGSS +RA+ A N +G T A+YG ML ++ + +PTH V Sbjct: 23 KNKLLLIDGSSVAFRAFFALYNQIDRFKNHSGLHTNAIYGFHLMLDHMMKRVQPTHVLVA 82 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 FDA TFR ELF YK+ R PD+ R Q + M+ A+G+ + EADD+IGTL Sbjct: 83 FDAGKTTFRTELFADYKAGRAKTPDEFREQFPYIRDMLGALGIAFYELEHYEADDIIGTL 142 Query: 122 AREAEKAG--RPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPEL 175 + AE+ V I +GDKD+ QL N + + P +++K G+ PE Sbjct: 143 DKMAERTELPFDVTIVSGDKDLIQLTDANTVVEISKKGVAEFEEFTPAYLMDKMGLTPEQ 202 Query: 176 IIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAK 235 ID ALMGD SDNIPGV +GEKT LL G L+ +Y + M Sbjct: 203 FIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEYGSLEGIYQHVDSFK------PSKMKEN 256 Query: 236 LEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGK 295 L +KE A+LS LATI T + + E + Q P + L + + +F Sbjct: 257 LLHDKEQAFLSKTLATINTSAPITIGLEDIVYQGPDLDRLSQFYDEMDF----------- 305 Query: 296 WLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFD 355 +Q K A + PQE EVT + T+ E L+ Sbjct: 306 -VQLKNALASQLPQEPVAEIAYQEVTDIRADMFSDDTVFYFEALRD-------------- 350 Query: 356 TETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKAL 415 + L+G ++ + + A ++ EL K +LE Sbjct: 351 ------NYHREELIGFAWGNQGQIYASADISLLTT------------ELFKKVLEQP--- 389 Query: 416 KVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEE 475 + K + +L++ G++L ++D L +Y+L S ++M +LA + T E Sbjct: 390 IATYDFKRSKVLLSHLGLDLPAASYDARLANYLL-STVEDNEMATLARLYTTIPLDTDEV 448 Query: 476 IAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVP 535 + GKG + ++ L + A V L M L +H+ +++ +IE+PL Sbjct: 449 VYGKGVKRAVPDKAVLLG---HLARKVQVLLDSRPVMLDKLAEHE-QADLYTDIELPLAN 504 Query: 536 VLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG 595 VL+++E G+ ++ L +E+ + + EL ++ +E+AGE FN++S KQL ILFEK Sbjct: 505 VLAKMEIEGIAVNQDSLQEMAEQNKVVIEELTQEIYEMAGEVFNINSPKQLGVILFEKMQ 564 Query: 596 IKP--LKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTG 653 + KKT G ST+ +VLE LA P+ IL+YR + KL+STY L I G Sbjct: 565 LPLHLTKKTKTGY-STAVDVLERLAPIAPIVAKILDYRQITKLQSTYVIGLQDYI-MADG 622 Query: 654 RVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQIELR 712 R+HT Y Q +T TGRLSS DPNLQNIP+R E+GR IR+AF +D V++S+DYSQIELR Sbjct: 623 RIHTRYLQDLTQTGRLSSVDPNLQNIPIRLEQGRLIRKAFTPSHDDAVLLSSDYSQIELR 682 Query: 713 IMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLP-LETVTSEQRRSAKAINFGLIYGMSAF 771 ++AH+S D+ L+ AF EG DIH +TA VFG+ E VT+ RR+AKA+NFG++YG+S F Sbjct: 683 VLAHISGDEHLIAAFKEGADIHTSTAMRVFGIEKPEDVTANDRRNAKAVNFGIVYGISDF 742 Query: 772 GLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSS 831 GL+ L IPRK+A+ Y+D YFERYPG+ YMER +AK++GYVETL RR LPDI S Sbjct: 743 GLSNNLGIPRKQAKAYIDTYFERYPGIKAYMERVVREAKDKGYVETLFKRRRQLPDINSR 802 Query: 832 NGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKD 891 R+ AER AIN+P+QG+AADI+K AMI +D L A +M++QVHDE+V EV Sbjct: 803 QFNLRSFAERTAINSPIQGSAADILKIAMINLDQALVAGGFETKMLLQVHDEIVLEVPSH 862 Query: 892 DVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 ++ AV + + + ME+ L VPL V+ +G++W +A Sbjct: 863 ELAAVKELVKETMESAVNLAVPLRVDESAGKSWYEA 898 >UniRef50_P59200 DNA polymerase I n=187 Tax=Firmicutes RepID=DPO1_STRR6 Length = 877 Score = 875 bits (2262), Expect = 0.0, Method: Composition-based stats. Identities = 339/936 (36%), Positives = 502/936 (53%), Gaps = 72/936 (7%) Query: 4 IPQNPLILVDGSSYLYRAYHAF----PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAA 59 + + L+L+DGSS +RA+ A N+AG T A+YG ML L+ + +P+H Sbjct: 1 MDKKKLLLIDGSSVAFRAFFALYQQLDRFKNAAGLHTNAIYGFQLMLSHLLERVEPSHIL 60 Query: 60 VVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIG 119 V FDA TFR E++ YK R PD+ R Q + ++ MG+ ++ EADD+IG Sbjct: 61 VAFDAGKTTFRTEMYADYKGGRAKTPDEFREQFPFIRELLDHMGIRHYELAQYEADDIIG 120 Query: 120 TLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI----LGPEEVVNKYGVPPEL 175 TL + AE+ G + I +GDKD+ QL + + + P+ ++ + G+ P Sbjct: 121 TLDKLAEQDGFDITIVSGDKDLIQLTDEHTVVEISKKGVAEFEAFTPDYLMEEMGLTPAQ 180 Query: 176 IIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAK 235 ID ALMGD SDNIPGV VGEKT LL G L+ +Y + + M Sbjct: 181 FIDLKALMGDKSDNIPGVTKVGEKTGIKLLLEHGSLEGIYENIDGMK------TSKMKEN 234 Query: 236 LEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGK 295 L +KE A+LS LATI T + + E L P E L + + FK+ + Sbjct: 235 LINDKEQAFLSKTLATIDTKAPIAIGLEDLVYSGPDVENLGKFYDEMGFKQLKQAL---- 290 Query: 296 WLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFD 355 +++ ++ TI+D+ + + F Sbjct: 291 -----------------------NMSSADVAEGLDFTIVDQISQDMLSEE------SIFH 321 Query: 356 TETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKAL 415 E + + NLVG FA G Y + L P + K LE Sbjct: 322 FELFGENYHTDNLVG--FAWSCGDQLYATDKLELLQDP----------IFKDFLEKTSLR 369 Query: 416 KVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEE 475 + K + +L +G++L+ AFD L Y+L S +++ ++A + + + E Sbjct: 370 --VYDFKKVKVLLQRFGVDLQAPAFDIRLAKYLL-STVEDNEIATIASLYGQTYLVDDET 426 Query: 476 IAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVP 535 GKG + + E+ + A V ++ + L ++ G L + ++E PL Sbjct: 427 FYGKGVKKAIPER---EKFLEHLACKLAVLVETEPILLEKLSEN-GQLELLYDMEQPLAF 482 Query: 536 VLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG 595 VL+++E G+ + + L E L + +L ++ +E+AGEEFN++S KQL +LFEK G Sbjct: 483 VLAKMEIAGIVVKKETLLEMQAENELVIEKLTQEIYELAGEEFNVNSPKQLGVLLFEKLG 542 Query: 596 IK--PLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTG 653 + KKT G ST+ +VLE LA P+ K IL+YR +AK++STY L I G Sbjct: 543 LPLEYTKKTKTGY-STAVDVLERLAPIAPIVKKILDYRQIAKIQSTYVIGLQDWILA-DG 600 Query: 654 RVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQIELR 712 ++HT Y Q +T TGRLSS DPNLQNIP R E+GR IR+AF+ ED V++S+DYSQIELR Sbjct: 601 KIHTRYVQDLTQTGRLSSVDPNLQNIPARLEQGRLIRKAFVPEWEDSVLLSSDYSQIELR 660 Query: 713 IMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLP-LETVTSEQRRSAKAINFGLIYGMSAF 771 ++AH+S+D+ L+ AF EG DIH +TA VFG+ + VT+ RR+AKA+NFG++YG+S F Sbjct: 661 VLAHISKDEHLIKAFQEGADIHTSTAMRVFGIERPDNVTANDRRNAKAVNFGVVYGISDF 720 Query: 772 GLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSS 831 GL+ L I RKEA+ Y+D YFER+PG+ YM+ +A+++GYVETL RR LPDI S Sbjct: 721 GLSNNLGISRKEAKAYIDTYFERFPGIKNYMDEVVREARDKGYVETLFKRRRELPDINSR 780 Query: 832 NGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKD 891 N R AER AIN+P+QG+AADI+K AMI +D L A + +M++QVHDE+V EV K Sbjct: 781 NFNIRGFAERTAINSPIQGSAADILKIAMIQLDKALVAGGYQTKMLLQVHDEIVLEVPKS 840 Query: 892 DVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 ++ + K + Q ME +L VPL+ + G W +A Sbjct: 841 ELVEMKKLVKQTMEEAIQLSVPLIADENEGATWYEA 876 >UniRef50_B9Y7P1 DNA polymerase I n=2 Tax=Erysipelotrichaceae RepID=B9Y7P1_9FIRM Length = 900 Score = 875 bits (2261), Expect = 0.0, Method: Composition-based stats. Identities = 318/928 (34%), Positives = 507/928 (54%), Gaps = 67/928 (7%) Query: 7 NPLILVDGSSYLYRAYHA--FPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 ++LVDG+S L+RA++A P++ S G PT A+YG M+ + +P V FD Sbjct: 32 KKMLLVDGNSMLFRAFYATFMRPMSTSTGIPTNAIYGFAMMINKAVQIIQPDAMLVAFDK 91 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 TFR ELF YK R PD L Q + ++A G+ ++ +EADD+IG++ ++ Sbjct: 92 GKHTFRHELFAEYKGGRKETPDALVEQFPIVREYLEAAGIKQFEMTDIEADDIIGSMIKK 151 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFL 180 VL + D+DM QL+ ++ + E + K G+ P+ I D Sbjct: 152 YPDWDINVL--SSDRDMLQLIDETTSVWLMKKGISDIEEMTVESLKEKMGITPDQIRDLK 209 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 LMGD+SDNIPG+P VGEKTA LL+ G ++ L A +++ G + +E K Sbjct: 210 GLMGDASDNIPGIPKVGEKTALKLLEQFGTVENLIANTDQLKG-------KLKDNVEAFK 262 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 + A LS +LATIKTDVE+ E+ E L + +YE + + QA+ Sbjct: 263 DQALLSKRLATIKTDVEIPFETEEFTFH-ITPEPLRQFYVRYEMNSLASKLSTQISEQAE 321 Query: 301 GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDS 360 PA++P T+ E + A L+ + D D Sbjct: 322 AEAPASQP-----------------------TLTVAEVRRCPEALLQDNAILVLDQ--DQ 356 Query: 361 LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN 420 A++ GL+ A + A YIP+ + + ++ AL + K+ + Sbjct: 357 PSVYFADVHGLALAYQDQ-AVYIPI--------EDVRQDEALLAYLA----GEKTKIVYD 403 Query: 421 LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK- 479 +K + G+ + G+ D M+ +++ +S + E++ +T+T +E+ GK Sbjct: 404 VKACLHLADGAGLTINGMKIDAMIAAFLCDSTLTSD--QKIREKFGLTETVTMDEVYGKP 461 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 GK +L Q+ + A+ + L P L++ + +++F ++EMPL VL + Sbjct: 462 GKMKLPEPQL----QRQLCAQKIQLIDALWKDSEPKLKEME-IVSLFYDVEMPLAAVLYK 516 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 +E+ G++ID + L + + + RL L + AGE FN++S KQL +LF+K G+ Sbjct: 517 MEKEGIRIDSQTLDDIARQTQARLDALTDAIYAAAGETFNINSPKQLGEVLFDKLGLPA- 575 Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 G STS +VLE+L +P+ +LE+R KL STY + L I+P GR+HT Y Sbjct: 576 ---SGKKRSTSADVLEKLLGVHPIIADLLEFRKYQKLYSTYAEGLKKYIHP-DGRIHTIY 631 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSR 719 +Q T TGRLSST+PNLQNI VR+EE R +R+AF+ E V+V++DYSQIELR++AH++ Sbjct: 632 NQCATQTGRLSSTEPNLQNISVRDEESREVRKAFLPSEGNVLVASDYSQIELRMLAHMAD 691 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 ++GLL AF DIH TA++VF +PL+ V ++ RR AKA+NFG++YG+S FGL++QL+I Sbjct: 692 EQGLLDAFRHAVDIHTKTASDVFQIPLDQVDAKHRRQAKAVNFGIVYGISDFGLSQQLDI 751 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 R +A+++++ Y + YP + +YM++ + +E GY T+ GRR +P+I N R Sbjct: 752 SRAQAKEFIERYLQSYPNISKYMDQVISFCQEHGYTATMLGRRREVPEIHDKNYMTREFG 811 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 +RAA+NAP+QG+AAD+IK AMI +D + + + +MI+QVHDEL+F+ ++DA+ Sbjct: 812 KRAAMNAPIQGSAADLIKLAMIRIDKAISEKGLQSKMILQVHDELIFDALPSELDALCAI 871 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWDQA 927 I + ME+ L VPL+ E G+ W +A Sbjct: 872 IQEGMEHAMELKVPLVAETKIGDTWYEA 899 >UniRef50_UPI0001978038 DNA polymerase I n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI0001978038 Length = 913 Score = 873 bits (2255), Expect = 0.0, Method: Composition-based stats. Identities = 313/927 (33%), Positives = 520/927 (56%), Gaps = 24/927 (2%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 N L ++D + +R+++A PPL NS G PTG + G N+L+SL T+ A + G Sbjct: 2 NTLSVIDTFGFFFRSFYALPPLKNSQGFPTGLLVGFCNLLQSLYKDPSCTYIAFALEGGG 61 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 + R +++ YK++R P++LR Q+ + MG +++ G EADDV+ ++ + A Sbjct: 62 RNKRRDIYSEYKANRQAAPEELRLQLPIAIEWIAKMGFLNISIEGYEADDVVASINKVAN 121 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDS 186 V I + DKD+ QL+ N + + + + + + KYGV P+ ID+ +L+GDS Sbjct: 122 AQNITVRIISHDKDLYQLIDENTYIYDPIGKKDIKEAQCLQKYGVYPKNFIDYQSLVGDS 181 Query: 187 SDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLS 246 SDN+ GV G+G K+AQ L+Q G +++LYA +++ + +A +++ K+ A+LS Sbjct: 182 SDNVMGVKGIGAKSAQKLIQRFGSIESLYARIDEVESAT---TPRIAKLIKEGKDNAFLS 238 Query: 247 YQLATIKTDVELELTCEQLEVQQPAA-EELLGLFKKYEFKRWTADVEA--GKWLQAKGAK 303 +L T+ ++ + + + + ++ +KYE K + +++ ++ Q K A+ Sbjct: 239 KKLVTLYDNLLENIDLNKCLMPESNPMLKIFDELEKYELKNIISKIQSPYERYTQKKSAQ 298 Query: 304 PAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDN 363 + + + + E + E+++ + + + FD E+D LD Sbjct: 299 MGIGSLQGTQSPQNIESKKDEAFSFTPHLLDTLESVEFVLDSIPQGVRVGFDCESDGLDL 358 Query: 364 ISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKY 423 A LVG SF + A Y+PV H YL +Q++ + A + + +G NLK+ Sbjct: 359 QEAQLVGFSFCFDGKNAYYVPVGHRYLGVGNQLNLQEAKSAISRIFTHP---LIGHNLKF 415 Query: 424 DRGILAN-YGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 D ++ G+E G +D+M+ S++ +S+A +D +W H I+F+ + KG+N Sbjct: 416 DFSLIYRTLGLEHIGKIYDSMILSWLYDSIAPV-GLDKQMLKWFNHTMISFDSVVPKGEN 474 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHK--GPLNVFENIEMPLVPVLSRI 540 F+Q+ + A +YAAEDA T +L+ ++ + K + G L + +N+E P + VL + Sbjct: 475 ---FSQVNIITATQYAAEDAAATFKLYHRLEDEFHKREWGGILELAQNLEYPFIKVLMDM 531 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK 600 E G+++D +L ++ + +AEL +K +++ GE FNL+S +QL ILFE G+KP + Sbjct: 532 ELEGIRVDIGLLEILKDKSSEHIAELSQKIYDLCGETFNLNSPQQLAHILFENLGLKPGR 591 Query: 601 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLM-INPKTGRVHTSY 659 GG ST E+ L + +P+ +IL+YR KLKSTY + L + +T R+HTS+ Sbjct: 592 SVKGG-LSTDEKTLLAIIDSHPVIDLILDYRESNKLKSTYIEPLLRLGRTNETHRIHTSF 650 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSR 719 Q TATGRLSS PNLQNIPVR EEGR+IRQAFI+ E + ++S DYSQIELR++AH + Sbjct: 651 LQNGTATGRLSSKSPNLQNIPVRREEGRKIRQAFISKEGHSLISIDYSQIELRLLAHFCK 710 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 D L+ +F + KDIH TAA +FG E ++R AK+INFGLIYGM + L++ L I Sbjct: 711 DPSLVESFMQDKDIHFETAARLFG---EQEAMQKRFIAKSINFGLIYGMGSKKLSQTLQI 767 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 P K+A++Y++ YF +P + +++ E GY +TL G R Y D K + +A Sbjct: 768 PLKQAKEYIESYFALFPTIKDFLNAQEEFLLENGYSQTLLGHRRYF-DFKRATDFMKANF 826 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 R IN+ QG+AAD+IK +M + +M++QVHDEL+FE + + AK+ Sbjct: 827 LREGINSIFQGSAADLIKLSMCEIHKRYAKSDL--KMLLQVHDELIFEAPSERAENYAKE 884 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWDQ 926 + +M + +L+VPL + G NW + Sbjct: 885 VADIMNSIYKLEVPLKCGIAIGTNWAE 911 >UniRef50_B1C859 DNA polymerase I n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C859_9FIRM Length = 888 Score = 873 bits (2255), Expect = 0.0, Method: Composition-based stats. Identities = 314/930 (33%), Positives = 508/930 (54%), Gaps = 52/930 (5%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 + L+++D S +Y+ + P+ + G T A+YG LN++ LI KP + FD Sbjct: 2 KKKLVIIDAYSIIYKCFFGVRPMHSPKGISTNAVYGFLNIILKLISDEKPNYLYAAFDKG 61 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 K FR + + YK+ R MP++LR QI + ++ A + L V EADD+IG+++ A Sbjct: 62 HKNFRHDKYADYKAGRQSMPEELREQIPYIERLLDAANIISLKVDDYEADDIIGSVSEVA 121 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLA 181 +K G ++ TGD+D QLV+ + ++ + ++ + + KY + P+ +ID A Sbjct: 122 DKEGIDTVVITGDRDSFQLVSEHTKILYSKRGISDIEVINEDYLKEKYNLTPKQMIDLKA 181 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGD SDNIPGV GVGEKTA LL+ LD +Y E+I G + KL +K+ Sbjct: 182 LMGDKSDNIPGVKGVGEKTALNLLEKYSDLDGVYEHIEEIKG-------KLQEKLINDKD 234 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 A+LS L TI+ +++++L + EE + + ++ + K + + Sbjct: 235 NAFLSKDLGTIEVNMDIDLDLNEECNFNFENEEFISILRELDLKSIIKKLGVKANDTRED 294 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 K K + + +E Y TI + +L + ++ + Sbjct: 295 NKENEKDDFSHIKEE-------------YKTISKDISLDEVLNNIKDKKSLSVYF----- 336 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 +S +L + A + YL +++++ L+ V N Sbjct: 337 -VLSDDLKTI------KSAMIFDKDNFYLYDSSVSDISELVKIMRSGLD-----IVTHNF 384 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 K + + G + FD L Y+LN R+ ++ +++++L I EE G+ Sbjct: 385 KDVYKVFVSQGYDDIHCRFDIYLGGYVLNPSDERYSLEVMSKKYLD---IDLEEEKGEAV 441 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLK-MWPDLQKHKGPLNVFENIEMPLVPVLSRI 540 Q + +E+ +Y + L ++ + K + ++++NIE L+ VL + Sbjct: 442 QQSFLD---IEDNNKYNMQMKKAKSIYSLAGIFKEKIKEEEMEDLYQNIEHKLMYVLGDM 498 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEE--FNLSSTKQLQTILFEKQGIKP 598 E G K+D L + R+ +L + E AGE+ FN++STKQL +LF+K G+ Sbjct: 499 ELEGFKVDLNTLEELGVDFDKRVEDLTRNIREAAGEDEDFNVNSTKQLGHVLFDKMGLPA 558 Query: 599 LKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTS 658 LKKT G ST+ EVLE+L +P+ +I++ R ++KL STY L +I+ T ++H++ Sbjct: 559 LKKTKTGY-STNIEVLEKLRDHHPIIPMIIDLRQISKLNSTYVKGLVSLIDKDTNKIHST 617 Query: 659 YHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQIELRIMAHL 717 ++Q +T TGR+SS++PNLQNIPVR EEGR IR+ FI+ E+ V+V ADYSQIELR++AH+ Sbjct: 618 FNQTITTTGRISSSNPNLQNIPVRTEEGRIIRKVFISSSENNVLVDADYSQIELRVLAHI 677 Query: 718 SRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQL 777 S+D+ L+ +F +DIH TA+EVF +P++ VTSE R SAKA+NFG++YG+S FGLA+ L Sbjct: 678 SKDEKLINSFKNNEDIHTRTASEVFNVPIDEVTSEMRSSAKAVNFGIVYGISDFGLAKGL 737 Query: 778 NIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRA 837 +I RK+A++Y+D Y +YPGV +YME AKEQGYV T+ RR Y+ +I S N R+ Sbjct: 738 SIARKDAKEYIDTYLSKYPGVCKYMEDIVVTAKEQGYVTTMFNRRRYINEIYSKNFNVRS 797 Query: 838 AAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVA 897 ER A+N P+QG+AADIIK AM+ V L + + ++I+QVHDEL+ + ++V+ V Sbjct: 798 FGERTALNTPIQGSAADIIKLAMVNVQNELNKRKLKAKLILQVHDELIIDTPMEEVEEVK 857 Query: 898 KQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 + MEN + PL ++ G+ W +A Sbjct: 858 ALLKDKMENVVDMSCPLKADISVGKTWFEA 887 >UniRef50_B9L837 DNA polymerase I n=2 Tax=Nautiliaceae RepID=B9L837_NAUPA Length = 872 Score = 872 bits (2253), Expect = 0.0, Method: Composition-based stats. Identities = 348/923 (37%), Positives = 526/923 (56%), Gaps = 58/923 (6%) Query: 8 PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 L ++D +L+R ++A PPL + G PTG + G LN + SL ++ + D+K K Sbjct: 2 TLTIIDTFGFLFRNFYALPPLKSKKGFPTGMITGFLNFVASLGRDFETDYIVFTLDSKEK 61 Query: 68 -TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 TFR E+F+ YK++RP P+DL+ Q+ ++ MG +L + G E+DD+I +LA+ A Sbjct: 62 DTFRKEIFKDYKANRPEAPEDLKTQLPVAIELINEMGFKMLEIPGYESDDIIASLAKLAA 121 Query: 127 KAGRPVLISTGDKDMAQLVTPN-ITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185 G V I + DKDM QL+ + I + + + + + + K+GV P+ I+F AL+GD Sbjct: 122 SQGIKVKIVSHDKDMYQLIDDDKIVIFDPIKKVEINEAKCIEKFGVHPKDFINFQALVGD 181 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 SSDNIPGV GVG KTA L+ L+ LY ++I G + KL +KE A+L Sbjct: 182 SSDNIPGVKGVGVKTAAKLINQYKTLENLYDHIDEIKG-------ALQKKLLADKENAFL 234 Query: 246 SYQLATIKTDVELELTCEQLEVQQPAAE-ELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304 S +L T+KTD+ + E+ + + ++ + V+ Sbjct: 235 SRELVTLKTDLFDNINLEEFKYPEINPILKVADKLIDLDITSILERVKKDGLYV------ 288 Query: 305 AAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNI 364 +T + D + A V I +E+ L I K+E + AFDTETDSL+N Sbjct: 289 -----KTKMPDNQVKFDA--------VLIENEKELFEIIDKIED-KIVAFDTETDSLEN- 333 Query: 365 SANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYD 424 N+VG SFA E A Y+P+ H YL DQI + AL+ ++ +L+ +G NLK+D Sbjct: 334 -PNIVGFSFAYEKNKAYYVPINHFYLGVTDQIPEKTALKAIQKILD---KKVIGHNLKFD 389 Query: 425 RGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQL 484 +L YG+E+ DTM+ ++IL+ + +DS+A+R+L H+ I F+E+ GK KN Sbjct: 390 FKMLKKYGLEIPTPHADTMILAWILDPDSPV-GLDSVAKRYLDHQNIKFKEVIGKRKN-- 446 Query: 485 TFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNG 544 F+++ ++EA +YAAEDA ++L+L+ + L + ENIEMP + +L IE G Sbjct: 447 -FSEVDIQEAAKYAAEDALISLKLYEILKEKLWEE--VKWDIENIEMPFINLLIDIESQG 503 Query: 545 VKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPG 604 +K+D + + E T +L L ++ + AG EFN+ STKQL ILFE + +KT Sbjct: 504 IKLDIEYMQKLQTETTEKLENLTQEIYRYAGSEFNIKSTKQLAHILFEVLKLPVKRKTKT 563 Query: 605 GAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPK-TGRVHTSYHQAV 663 G ST E+VL L +P+ + +LEYR L KL STY L +++T++ Q Sbjct: 564 GY-STDEKVLTSLKGTHPIIEKLLEYRKLDKLLSTYIIPLQEYAKKDPNHKIYTNFLQTG 622 Query: 664 TATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGL 723 TATGRLSS +PNLQNIP + IR AF+A + VS DYSQIELR++AH S+D+ L Sbjct: 623 TATGRLSSKNPNLQNIPTSTD--INIRDAFVAEK--EFVSLDYSQIELRLLAHFSKDEHL 678 Query: 724 LTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKE 783 + AF E KDIH TA ++FG E E R AK+INFGLIYGM L+ +N+ KE Sbjct: 679 INAFLEDKDIHLETAVKIFG---ENRAKEYRPVAKSINFGLIYGMGPKKLSETINVSTKE 735 Query: 784 AQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAA 843 A+++++ YF +P V ++E T+ +A+E+GYVETL RR + D ++N A ER A Sbjct: 736 AKEFIEKYFASFPTVKTFLENTKIEAREKGYVETLLKRRRFF-DFAAANARTLANFEREA 794 Query: 844 INAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQL 903 +N QG+AADIIK+AMI + P+ +M++Q+HDEL+FE+ D A + ++ Sbjct: 795 VNTIFQGSAADIIKKAMIEIKQRF----PKAKMLLQIHDELIFEIDSRD---EAYEYKKI 847 Query: 904 MENCTRLDVPLLVEVGSGENWDQ 926 M+N +L+VPL V + G+ W + Sbjct: 848 MQNVFKLEVPLKVGISFGKRWGE 870 >UniRef50_D0LQ66 DNA polymerase I n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LQ66_HALO1 Length = 930 Score = 871 bits (2252), Expect = 0.0, Method: Composition-based stats. Identities = 356/938 (37%), Positives = 520/938 (55%), Gaps = 27/938 (2%) Query: 8 PLILVDGSSYLYRAYHAFPP-----LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 L ++DG Y+YRAY A L+ G PT A++ ML L + +P AVVF Sbjct: 3 RLHILDGHGYIYRAYFALAGPGSQRLSTKGGMPTAALFVYAQMLIRLFIDERPERIAVVF 62 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 D G+TFR+EL + YK+ R P+DL+ Q+ + +A+G P++ GVEADDVI TL Sbjct: 63 DPPGRTFRNELDDAYKATRRETPEDLKPQLPYFSKLTEALGWPVICEQGVEADDVIATLV 122 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLAL 182 A G V++ +GDKD+ QLV +T+I+++ + + V K+GVPP + D+LAL Sbjct: 123 GRARAQGWDVVVYSGDKDLMQLVDEGVTVIDSLRSIVYDAARVEKKFGVPPAKLRDYLAL 182 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLE--QNK 240 +GD SDN+PG+PGVG KTA LL +D + A E++ G M + + Sbjct: 183 VGDVSDNVPGMPGVGAKTAAKLLGSYDSIDGILAHNEELKG-------KMGERFRDPEAL 235 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 E S +L T+++DV + + L Q + LF++ EF+ + A + Sbjct: 236 ERLARSRELVTLRSDVATDAELDALVQQPWEGAQAEELFRELEFETLLERLSAARPDVPS 295 Query: 301 GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPV-----FAFD 355 + AA A + +A + + + L A A Sbjct: 296 PSGDAAATGPKGNDANADDGSAASSARPAFAPQPTQVALDEAALAELLAAACAHRRVAVF 355 Query: 356 TETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKAL 415 E+D A +GL+ A Y+P+AH YL P Q S E L+ LL D Sbjct: 356 AESDGARPDRAIAIGLALAAGEAAPVYLPLAHRYLGVPAQWS--ALPEALRALLADPAVE 413 Query: 416 KVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEE 475 V ++K +L L G+ DTML +Y+L G+ +++ +A + + T + Sbjct: 414 IVAHDVKSLARLLRTLDAPLAGVLGDTMLAAYLL-GQEGKLEVEDVAGAAVGAELPTRKS 472 Query: 476 IAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKG---PLNVFENIEMP 532 + G G++++ F + + A A A L ++ L+ G + + +E+P Sbjct: 473 LLGSGRSKIGFEAVDISAAAMRAGGAAAAVLASWPRLGEQLEHAGGDGALRKLHDELELP 532 Query: 533 LVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFE 592 L +L+ IE +G+ +D L ++EL +LA +E++ +E+AGEEFNL S KQL +LFE Sbjct: 533 LALLLAEIEEHGITLDVPYLRALADELGGQLAGIERQVYELAGEEFNLGSPKQLGHMLFE 592 Query: 593 KQGIK--PLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINP 650 K G++ +++T G+ ST+ E+LE +A + + I+E+R L KLK TY D LP ++NP Sbjct: 593 KLGLRADKMRRTKTGSYSTNHEILESMAESHAIIPPIIEHRELLKLKGTYLDALPPLVNP 652 Query: 651 KTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIE 710 TGR+HTS++QAV ATGRLSS DPNLQNIP+R + GRRIR+AF+A +VS DYSQIE Sbjct: 653 HTGRIHTSFNQAVAATGRLSSQDPNLQNIPIRKDIGRRIRRAFVAAPGKTLVSIDYSQIE 712 Query: 711 LRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSA 770 LR+MAHLS D+ L+ AF D+H TAAEVF LP E + ++RR AKA+N+GL+YG S Sbjct: 713 LRVMAHLSGDERLVQAFQNDVDVHTQTAAEVFDLPREEIGPDERRVAKAVNYGLMYGQSE 772 Query: 771 FGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKS 830 FGLA+ L I R +A YM+ YFER+ V YM++ A A+ +G TL GRR +PD+ + Sbjct: 773 FGLAQSLGISRAQAAHYMERYFERFSTVRAYMDQVVADARAEGAAVTLLGRRRPIPDLDA 832 Query: 831 SNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHK 890 N RR AAER A N P+QG+AADIIK AM+ V A L + M++ VHDELVFEV Sbjct: 833 RNQQRRRAAERVAQNTPVQGSAADIIKLAMLRVAAHLARGEWDASMLLTVHDELVFEVVP 892 Query: 891 DDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 + + AK + ME LDVPL+ G +NW AH Sbjct: 893 EQAETFAKAMIAEMEGAYALDVPLVASAGIADNWADAH 930 >UniRef50_Q9RAA9 DNA polymerase I n=2 Tax=spotted fever group RepID=DPO1_RICFE Length = 922 Score = 870 bits (2249), Expect = 0.0, Method: Composition-based stats. Identities = 335/953 (35%), Positives = 520/953 (54%), Gaps = 56/953 (5%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 M Q +N L+L+DG +++RAY+A PLT+ GEP GA+YG +ML L+ +KP H AV Sbjct: 1 MTQ--KNTLLLIDGYGFVFRAYYAQQPLTSPKGEPVGALYGFASMLLKLLSDFKPKHVAV 58 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 VFD+ GK FR ++ YK++RPP P+DL Q+ + + + P+L +G EADD+I T Sbjct: 59 VFDSGGKNFRHHIYPEYKANRPPPPEDLVVQLPLVRDVASNLNFPILEKNGYEADDIIAT 118 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL 180 A + G V++ + DKD+ QL+ NI + + + + ++VV K+G + + + + Sbjct: 119 FAAKTAALGEDVVVISSDKDLLQLMGENIKIYDPLKGKYITEDDVVKKFGTTSDKLREVM 178 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 AL+GD SDNIPGVP +G KTA +L+ G ++ ++ E+++ L L+ +K Sbjct: 179 ALIGDRSDNIPGVPSIGPKTASSLITQFGSVENIFNSLEQVSSL------KQRETLQNSK 232 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 E A +S+QL + ++V+L+ LE P +++L G ++Y FK E ++ Sbjct: 233 EAALISWQLIGLDSNVDLDFQLNNLEWSPPNSDKLTGFLQEYGFKSLYKRAENLFDIKIN 292 Query: 301 GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDS 360 K + + T + I + L + K EK +F Sbjct: 293 DHKEIVENKVTEAKE-----------------ISNASELADFAKKAEKIGIFGIYLLQHK 335 Query: 361 LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN 420 DN++ + LS + + +HD + + + +++ LL D+ K+ + Sbjct: 336 GDNVA---LILSLQNQSYIIKISNTSHDLFSYNTKNNNDWFSDIIFNLLTDKSIRKITYS 392 Query: 421 LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDM--DSLAE--RWLKHKTITFE-- 474 LK A E+ I D L Y L++ + ++ ++L E R L E Sbjct: 393 LKPLLKFYAEQSHEITAIE-DLELMQYALSAGLSQKNLFEEALKEDNRHLSKPAYREEFK 451 Query: 475 ---------------EIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDL--Q 517 E A G + + E A + + ++ Sbjct: 452 GDTEALATAAYKSVREDASTGSTSKLPLETKFGKMSNVINESARIVAEFTSLYKQNILEL 511 Query: 518 KHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEE 577 K ++ NI++P+ +L ++E+ G+K+D L+ S E + +LE++ ++G + Sbjct: 512 KDNKAFRLYSNIDLPICFILDKMEKIGIKVDANYLNQLSAEFGAEILKLEEEIFALSGTK 571 Query: 578 FNLSSTKQLQTILFEKQGIKPLKKT-PGGAPSTSEEVLEELALD-YPLPKVILEYRGLAK 635 FN+ S KQL ILFEK + K + + ST E+LE+L+ Y + ++L +R L K Sbjct: 572 FNIGSPKQLGEILFEKMQLPFGKASAKASSYSTGAEILEKLSEHGYNIADLLLRWRQLTK 631 Query: 636 LKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA 695 LK+TYTD LP I+ T RVHT++ Q T TGRLSS +PNLQN+P+R+ EG +IRQAFIA Sbjct: 632 LKNTYTDSLPKQIDNITHRVHTTFLQTSTTTGRLSSQEPNLQNVPIRSSEGNKIRQAFIA 691 Query: 696 PEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRR 755 E Y ++SADYSQIELRI++H++ L AF DIH TA ++F L +TSE RR Sbjct: 692 EEGYKLISADYSQIELRILSHIANIDALKQAFINKDDIHTQTACQIFNLQKHELTSEHRR 751 Query: 756 SAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYV 815 AKAINFG+IYG+SAFGLA+QLN+ EA +Y+ YF Y GV EYME+T+A A GYV Sbjct: 752 KAKAINFGIIYGISAFGLAKQLNVSNGEASEYIKKYFAEYKGVQEYMEQTKAFASSNGYV 811 Query: 816 ETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVR 875 GR+ ++P I + + AERAAINAP+QGT ADIIK AMI +D ++ + R Sbjct: 812 INFFGRKCFVPLIH--DKKLKQFAERAAINAPIQGTNADIIKIAMINLDQEIEKNNLKTR 869 Query: 876 MIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 +++Q+HDEL+FEV +D+V+ V I ++MEN T +DVP++ E+ G NW + H Sbjct: 870 LVLQIHDELLFEVPEDEVELVTPIIKKIMENSTNMDVPIITEIRVGNNWMEIH 922 >UniRef50_Q2JCJ5 DNA polymerase I n=10 Tax=Actinomycetales RepID=Q2JCJ5_FRASC Length = 945 Score = 870 bits (2249), Expect = 0.0, Method: Composition-based stats. Identities = 336/932 (36%), Positives = 484/932 (51%), Gaps = 53/932 (5%) Query: 5 PQNPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 L+L+DG S YRA++A P + + G+PT A+YG +ML +++ +PTH AV + Sbjct: 56 ATPRLLLLDGHSLAYRAFYALPVENFSTTTGQPTNAVYGFTSMLINVLRDERPTHVAVAW 115 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 D TFR + YK+ R P D Q+ +H + A+ +P ++ G EADDVI TLA Sbjct: 116 DLPTPTFRHTQYAEYKAGRGETPADFVGQVSLIHQVCDALAVPGVSAPGYEADDVIATLA 175 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIID 178 G VL+ TGD+D QLV +T++ T P+EV KYG+ P D Sbjct: 176 TLGAAEGMDVLVVTGDRDALQLVDERVTVLMTRKGISDMVRFTPDEVQAKYGLSPVQYPD 235 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 F AL GD SDN+P VPGVGEKTA +Q G L L ++I G A L Sbjct: 236 FAALRGDPSDNLPSVPGVGEKTATKWIQQFGSLAELVDHADEIGG-------KTGASLRA 288 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 + + L + DV L++ L ++ E + LF +F+ + Sbjct: 289 HLSEVIRNRSLTELSRDVPLDVVPAGLRMRPWDREAVHQLFDTLQFRVLRERL------- 341 Query: 299 AKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTET 358 A A ++ +T+L + W+A+ A Sbjct: 342 --------------YAALAIAPPPADEGFEIELTVLGPGEVARWLAE------HAHRVGR 381 Query: 359 DSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVG 418 L G + G+A P ++ L L D K Sbjct: 382 TGLHAR--GTWGRGTGVLAGLALAAAGGAAAWIDPTLLTPADV-AALGAWLADPNQPKAA 438 Query: 419 QNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAG 478 ++K L + L G+ DT L +Y+ D+ L R+L H+ ++ + + G Sbjct: 439 HDVKGPMLALTELDLPLAGVTSDTALAAYLALPGQRSFDLADLVARYL-HRDLSADPVPG 497 Query: 479 KGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLS 538 QLT + + A A L+L + DL++ + + +IE+PLV VL+ Sbjct: 498 --GQQLTLDGSGEADQAHADAVRARACLELADALDADLER-RSAATLLRDIELPLVTVLA 554 Query: 539 RIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKP 598 +ER G+ +D + L + ++ + +AHEI G FNL S KQLQ ILF++ G+ Sbjct: 555 GMERAGIAVDSEHLTELQKHYGGEVSAVAAQAHEIVGRPFNLGSPKQLQQILFDELGLPK 614 Query: 599 LKKTPGGAPSTSEEVLEELA--LDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVH 656 KK G +T + L LA D+PL V+L +R +A+LK T D L MI+ GR+H Sbjct: 615 TKKIKTGY-TTDADALAWLAVQSDHPLLPVLLRHRDVARLK-TVVDSLIPMID-DIGRIH 671 Query: 657 TSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY-VIVSADYSQIELRIMA 715 T+++Q + ATGRLSS DPNLQNIP+R EGR+IR+AF+ Y +++ADYSQIE+RIMA Sbjct: 672 TTFNQTIAATGRLSSADPNLQNIPIRTAEGRQIRRAFVVGAGYETLLTADYSQIEMRIMA 731 Query: 716 HLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLAR 775 HLS D+GL+ AF G+D+H AAE FGLP+ V E RR KA+++GL YG+SAFGLA Sbjct: 732 HLSGDEGLIEAFGSGEDLHTFVAAEAFGLPVSEVDPELRRRIKAMSYGLAYGLSAFGLAG 791 Query: 776 QLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGAR 835 QL I EA+++MD YF R+ GV +++ +A++ GY ET+ GRR YLPD+ S N R Sbjct: 792 QLGIAPDEAREHMDAYFARFGGVRDFLRGVVERARKDGYTETILGRRRYLPDLTSDNSQR 851 Query: 836 RAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDA 895 R AER A+NAP+QG+AADIIK AM+ VD L A R+++QVHDELV E+ + DA Sbjct: 852 RQMAERMALNAPIQGSAADIIKIAMLGVDRALCAGGYASRLLLQVHDELVLEIAPGEHDA 911 Query: 896 VAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 V + + M + + VPL V VG+G WD A Sbjct: 912 VERLVRAEMTSAYTMSVPLDVSVGAGCTWDDA 943 >UniRef50_Q04G12 DNA polymerase I n=28 Tax=Lactobacillales RepID=Q04G12_OENOB Length = 903 Score = 869 bits (2245), Expect = 0.0, Method: Composition-based stats. Identities = 333/933 (35%), Positives = 493/933 (52%), Gaps = 58/933 (6%) Query: 7 NPLILVDGSSYLYRAYHAFPP----LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 L+L+DG+S +RA++A + G T A+ N ++ + P +A V + Sbjct: 14 KTLLLIDGNSLAFRAFYAMYNQLDRMVAHTGLHTNALVAFNNFFDQVVEKMNPDYALVAW 73 Query: 63 DAKG--KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 DA TFR ++F+ YK R P +L Q L MV G+ + G EADD+IGT Sbjct: 74 DAGKGATTFRAKIFDDYKGDRQTTPPELSEQFPYLRKMVDLHGIHSYELPGFEADDIIGT 133 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI----LGPEEVVNKYG-VPPEL 175 ++ AEKAG I TGD+D+ QLVT N+++ T P+ + K+G + P Sbjct: 134 YSKLAEKAGLKTTIITGDRDLTQLVTDNVSVNVTKKGVTELDRYTPKFLAEKWGGITPSQ 193 Query: 176 IIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAK 235 +I+ +L GD+SD+ PGV VG KTA LL G LD +Y + + + Sbjct: 194 VIEMKSLTGDTSDHYPGVTKVGLKTAIKLLNEFGSLDGIYQHIDSMK------TSKLKEN 247 Query: 236 LEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGK 295 L +KE AY +++LATI+TD +EL ++L Q +EL+ +++ +FK A + Sbjct: 248 LLNDKESAYRAHELATIRTDAPVELEMKELINQPINFQELIPFYEELDFKVQLAKI---H 304 Query: 296 WLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFD 355 +Q G + +E +V VT L L E Sbjct: 305 SMQKAGMVGQDQEEEKNV----------------QVTELKAANLDHLS---EIKNYLTVY 345 Query: 356 TETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKAL 415 +TDS + +A + V ++ E + L Sbjct: 346 FQTDSDNYHTAKISAF------------VVGNENDGYFASRDLELLNSSVVRKLFKGDLP 393 Query: 416 KVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEE 475 K N K +L G+++ + FD +L SY+L++ + + +LA R+ + E Sbjct: 394 KYVFNAKELIVLLNRLGLQINNLDFDFLLVSYLLDTTDNDNQLATLANRF-NVFLESDAE 452 Query: 476 IAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVP 535 + G G E + A A +LH L H+ ++ IE+PL Sbjct: 453 VYGSGVKFKIPEN--NETLFSHMANKASTISKLHDPSMKKLSDHQ-QAELYRQIELPLSK 509 Query: 536 VLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG 595 VL+ +E NG+K+D L +E R+ ELEK+ +E AG+EFN++S KQL +LF Sbjct: 510 VLASMEINGIKLDQAELKKLGQEFDQRIFELEKQIYEEAGQEFNINSPKQLADLLFAHMK 569 Query: 596 IKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRV 655 I P+KKT G ST+ VLEELA YP +IL+YR LAKL STY L ++NP ++ Sbjct: 570 IPPIKKTKTGY-STAANVLEELAEKYPFVGLILQYRQLAKLNSTYVKGLLEVVNPDDSKI 628 Query: 656 HTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQIELRIM 714 HT Y Q +T TGRLSS DPN+QNIP R+EEG+RIR+AF+ E + I +DYSQIELR++ Sbjct: 629 HTRYLQTLTQTGRLSSVDPNMQNIPDRDEEGKRIRKAFVPSHEGWEIFGSDYSQIELRVL 688 Query: 715 AHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLET-VTSEQRRSAKAINFGLIYGMSAFGL 773 AH++ D+ L AF G+DIH ATA +FGL + +T +QRR AKA+NFG++YG+S FGL Sbjct: 689 AHVTGDENLKKAFESGEDIHAATARSIFGLSTDQKITFDQRRRAKAVNFGIVYGISDFGL 748 Query: 774 ARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNG 833 A++L R E ++ + YF +P V +++ A A +QGYVET+ RR YLPDI S N Sbjct: 749 AQRLGTSRIEGKEIIQTYFHEFPKVKNWIDSIIALAHKQGYVETIAQRRRYLPDIHSKNF 808 Query: 834 ARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDV 893 R+ AER A N P+QG+AADIIK AMI + L + +M++QVHDEL+FE K ++ Sbjct: 809 NLRSFAERTATNTPIQGSAADIIKIAMIKMQQALDDNHLKAKMLLQVHDELIFEAPKQEI 868 Query: 894 DAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 D + + + ++M++ +L+VPL VE G NW Sbjct: 869 DILEELVPKVMDSAVKLNVPLRVEAHHGVNWYD 901 >UniRef50_B2TNM6 DNA polymerase I n=7 Tax=Clostridiales RepID=B2TNM6_CLOBB Length = 871 Score = 868 bits (2244), Expect = 0.0, Method: Composition-based stats. Identities = 325/926 (35%), Positives = 495/926 (53%), Gaps = 62/926 (6%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L+++D +S + RA++A PPLTN G T A+YG NML + + P + FD K Sbjct: 2 KRLLILDSNSLMNRAFYALPPLTNDDGVNTNAIYGFTNMLFKMKDEINPDNIIATFDKKS 61 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 TFR + + YK+ R MP +L Q + ++K MG+ + G EADD+IGT+++ E Sbjct: 62 PTFRHKEYSEYKAGRKKMPPELGEQFPIIKELLKYMGIKTFEIDGFEADDIIGTISKFGE 121 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPELIIDFLAL 182 + V I TGDKD QL + ++ T I + ++++ + P ID L Sbjct: 122 ENDMEVYIVTGDKDALQLASEKTKVVITKKGVTETAIYDYKAFMDEFEITPTQFIDVKGL 181 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 MGD SDNIPGVPGVGEKTA L++ G L+ + +I+G K + LE N E Sbjct: 182 MGDKSDNIPGVPGVGEKTAFKLIKEYGTLEDVLKHIPEISG------KKLKENLENNMEQ 235 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A S +LATI +V L++ +E AD L+ Sbjct: 236 AIFSKKLATIMREVPLDINLSDIEN---------------------ADEVNLVELKKLSK 274 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 K + + E I+ I E ++ + ++ T D+ Sbjct: 275 NLKLKSVLSKYDLDNNEAELQEIANIEISKIETIEEMEEVLLSIKDRSYI-LFTLNDASK 333 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 + L L E G + I + +RE+AL LL+ +ED+ KV + K Sbjct: 334 YSTIELEYLILG-EEGRSHVIDFKLVSMS-----NREKALNLLRTFMEDKTVKKVIHDSK 387 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 L Y I+++G FDT + +Y+++S +++ L R+L+ + + Sbjct: 388 NLITFLNKYDIDIQGFDFDTAIAAYLIDSSKANYEVFDLINRFLEKDIKSDCDDLK---- 443 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 A + +L+ K+ L K ++ +E PL+ VLS +E Sbjct: 444 ----------------AICSSYLTKLYEKLKERLHKED-MDELYYKVEHPLIYVLSSMES 486 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 G KI+ L + ++ + EK+ +E+A EEFN+SS KQL ILFEK + +KKT Sbjct: 487 IGFKINKDKLEELRIKFKEQIEKTEKEIYELADEEFNVSSPKQLGKILFEKLDLPVIKKT 546 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST++EVLE+L +P+ ++ YR + K+ STY + L +I+ G +H++++Q Sbjct: 547 KTGY-STNQEVLEKLIDKHPIITKVMYYRQITKINSTYVEGLKNVIDI-DGCIHSNFNQT 604 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE-DYVIVSADYSQIELRIMAHLSRDK 721 VT TGRLSST+PNLQNIP++ E G+ IR+ FI + D +++S DYSQIELR++AH++ DK Sbjct: 605 VTTTGRLSSTEPNLQNIPIKYEMGKEIRKVFIPQDSDDILISCDYSQIELRVLAHVADDK 664 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 ++ AF DIH TA+EVF +P++ VTS R +AKA+NFG++YG+S F LA+ L I + Sbjct: 665 NMIDAFEHHSDIHTKTASEVFKVPVDEVTSTMRSNAKAVNFGIVYGISDFSLAQDLKITK 724 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 KEA +YM +YFERYP + EY+ AKE+GYV T+ RR ++P+IKSSN +A ER Sbjct: 725 KEAAEYMAIYFERYPKIKEYLNYVSEYAKEKGYVLTILNRRRFIPEIKSSNKIVKALGER 784 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 A+NAP+QG+AADIIK AM+ V L+ + +I+QVHDEL+ V KD+ D V + + Sbjct: 785 LAMNAPIQGSAADIIKLAMVNVYNKLREKNLNSELILQVHDELILNVKKDEFDIVKQLVI 844 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQA 927 + ME +L+V L V++ G W A Sbjct: 845 EEMEKAIKLNVALDVDLKYGYTWYDA 870 >UniRef50_O51498 DNA polymerase I n=20 Tax=Borrelia RepID=DPO1_BORBU Length = 908 Score = 868 bits (2242), Expect = 0.0, Method: Composition-based stats. Identities = 325/928 (35%), Positives = 518/928 (55%), Gaps = 27/928 (2%) Query: 7 NPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 L L+D + ++R YH PL N+ GE A G L +I + P H + FD+ Sbjct: 2 KELYLIDALNIIFRNYHVMKNYPLLNTQGENVNAFIGFFKTLFFIIKEKNPEHLIITFDS 61 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 + TFR + + YK+ R PDDL QI + + +P+ + G EADD++ + A++ Sbjct: 62 EVPTFRKQKYPSYKATRDLPPDDLIPQIGWIKEGLLKAKIPIFEMEGYEADDLLASFAKK 121 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTIL--GPEEVVNKYGVPPELIIDFLAL 182 A K I + DKD+ Q ++ + ++ N+ + E V K+GV I D+LA+ Sbjct: 122 AAKNNYLTYIISPDKDLLQTMSEYVKILKIENNSFIEMDNEYVTKKFGVNSFQIKDYLAI 181 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 +GD SDNIPG+ G+G K A LL+ LD +Y+ E I K L + KE Sbjct: 182 VGDRSDNIPGIKGIGAKGAANLLREFKTLDGIYSNLEII-------NKKHRELLIKEKEN 234 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK-G 301 A+LSY+L +++ ++++ E ++ +EE++ LF+K+ + Q K Sbjct: 235 AFLSYELVSLEENLKIP-EIENFALKNF-SEEIISLFEKHSAIALIKTYKKDILKQEKEN 292 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 A + ++ + ++ Y +I + L I L+KA + DTET SL Sbjct: 293 ADQKSLFKQEPTTNSLDDINTIDTENVKYRSITTKIELDDLIESLKKAKYISIDTETSSL 352 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 D +A L+G+S + + YIP+ I + ++ L E +GQN Sbjct: 353 DTYTAKLIGISISFKEFEGYYIPIEAKGKIY---IEKNYIIQKFNNLFES-NPKIIGQNY 408 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 K+D IL N G FDTM+ +Y++++ + +D LAE++L HK I +E++ K Sbjct: 409 KFDYKILKNNGFNPIPPYFDTMIAAYLIDTN-SKVSLDFLAEKYLMHKNIKYEDVIQKND 467 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 N F I+LE A Y++EDAD+T +L L++ K + IEMP V+ +E Sbjct: 468 N---FANISLEMATSYSSEDADITFRLFNIFTKKLKEDKLDKLM-HEIEMPFNKVIIEME 523 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIK-PLK 600 NG+ +D + L + +EL L +E + + G +FNL+S KQ+ ILFEK +K P K Sbjct: 524 ENGIYLDKEYLKEYGKELGKELEAIENEIIKSIGIDFNLNSPKQMHEILFEKLNLKLPEK 583 Query: 601 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 ST +VLE L + + +++YR +AKLKSTYTD L +IN KT R+HTS+ Sbjct: 584 MKK---DSTDIKVLESLREQHESIENLIKYRQIAKLKSTYTDNLIELINYKTNRLHTSFI 640 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRD 720 Q TATGR++S +PNLQNIP+++E+GR+IR+AF + +SADYSQIEL I+AHLS+D Sbjct: 641 QTKTATGRITSINPNLQNIPIKDEKGRKIRKAFKPENGNIFISADYSQIELAILAHLSQD 700 Query: 721 KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 + L+ AF KDIH TA+++F + + +T RR AK+INFG+IY MS F LA++L I Sbjct: 701 EVLIKAFENNKDIHTETASKLFKIEEKEITPNLRRIAKSINFGIIYRMSDFRLAKELGIT 760 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 ++EA+ +++ YF+ YP + E++ + GY ET+ RR Y+ +I S+N R+AAE Sbjct: 761 KEEAKGFINSYFDSYPKIKEFIINQINFVRNAGYSETILKRRRYIKEINSNNYLERSAAE 820 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 R AIN+ +QG+AADI+K AM+ V ++++ ++++QVHDE++ E ++ + V K + Sbjct: 821 RIAINSIIQGSAADIMKIAMVKVFNEFKSKKMESKILLQVHDEMLIESPIEEENEVKKIL 880 Query: 901 HQLMENCTRLDVPLLVEVGSGENWDQAH 928 +ME L++PL + +G++W + H Sbjct: 881 KIMMETAYTLNLPLRANIETGKSWGEIH 908 >UniRef50_C1A095 DNA polymerase I n=60 Tax=Actinomycetales RepID=C1A095_RHOE4 Length = 915 Score = 867 bits (2241), Expect = 0.0, Method: Composition-based stats. Identities = 339/932 (36%), Positives = 491/932 (52%), Gaps = 53/932 (5%) Query: 6 QNPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + L+L+DG S +RA++A P +G+ T A+YG +ML +L+ +PTH A FD Sbjct: 25 RPLLMLLDGHSLAFRAFYALPAENFKTHSGQATNAVYGFTSMLINLLRDEQPTHLAAAFD 84 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 +TFR +LF YK+ R PD+ + QI+ ++ A+G+P++A G EADDVI TL Sbjct: 85 VSRQTFRADLFPEYKAQRAKAPDEFKGQIDITKDVLGALGIPVMAEEGFEADDVIATLTT 144 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPELIIDF 179 +AE G VL+ TGD+D QLVT N+T++ V KY + P DF Sbjct: 145 QAEALGYRVLVVTGDRDSLQLVTDNVTVLYPKKGVSELTRFTQTAVEEKYSLTPSQYPDF 204 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 AL GD SDN+PG+PGVGEKTA ++ G L L +K+ G + L +N Sbjct: 205 AALRGDPSDNLPGIPGVGEKTATKWIREYGDLQGLVDNVDKVRG-------KVGDSLREN 257 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 L+ QL + DV L T EQL + E++ LF EFK + A Sbjct: 258 LANVLLNRQLTEMVRDVPLPYTPEQLVLAPWDREKIHALFDDLEFKVLRDRLFA------ 311 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 A+E EV+ ++ LD E+ V T T Sbjct: 312 ------TLSSSEPEAEEGFEVSGDALAPGAVAAWLDAHARTG-----ERHGVTVLGTRT- 359 Query: 360 SLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQ 419 + ++ L+ A G AYI + + + L D K Sbjct: 360 ---PFAGDVTALAIAASDGECAYIAASTATPEDEAALGD---------WLADASQPKALH 407 Query: 420 NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 K+ L G L G+ DT L +Y++ ++D L+ R+LK + E +G+ Sbjct: 408 EAKWAIHALRGRGWTLGGLTSDTALAAYLVRPGQRSFNLDDLSLRYLKRELRA--ETSGQ 465 Query: 480 GKNQLTFNQIALE-EAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLS 538 + L + L+ EA A A L L + +L+ + ++ ++E+PL L+ Sbjct: 466 EQLSLLDDTEQLDAEAAETAMLSAQAVLDLAAALDTELESIES-KSLLSDMELPLTIELA 524 Query: 539 RIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKP 598 +IE G+ +D LH+ ++A+ A+E+ ++ NL S KQLQ +LFE+ + Sbjct: 525 QIEATGIAVDSAHLHDLQSRFASQVADAANSAYEVIDKQINLGSPKQLQVVLFEELDMPK 584 Query: 599 LKKTPGGAPSTSEEVLEELALD--YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVH 656 KKT G + E L+ L +P + +L +R ++K T D L + + GR+H Sbjct: 585 TKKTKTGYTT-DAEALQGLFDKTGHPFLEHLLAHRDATRMKVT-VDGLLKAV-AEDGRIH 641 Query: 657 TSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY-VIVSADYSQIELRIMA 715 T+++Q V ATGRLSSTDPNLQNIPVRN+ GR IR F+ + + V+++ADYSQIE+RIMA Sbjct: 642 TTFNQTVAATGRLSSTDPNLQNIPVRNDAGREIRDGFVVGQGFDVLLTADYSQIEMRIMA 701 Query: 716 HLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLAR 775 H+S D+GL+ AF G+D+H + FG+P+E VT E RR KA+++GL YG+SA+GLA Sbjct: 702 HVSGDEGLIEAFNTGEDLHSFVGSRAFGVPIEEVTPELRRRVKAMSYGLAYGLSAYGLAS 761 Query: 776 QLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGAR 835 QL I +EA++ MD YF R+ GV +Y+ QA++ GY TL GRR YLPD+ S N R Sbjct: 762 QLKISTEEAKQQMDAYFARFGGVRDYLHAVVEQARKDGYTSTLYGRRRYLPDLNSDNRQR 821 Query: 836 RAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDA 895 R AERAA+NAP+QGTAADIIK AMI V L + RM++QVHDELV EV +++ Sbjct: 822 REVAERAALNAPIQGTAADIIKVAMINVQKALAEAGLKSRMLLQVHDELVLEVVASELEE 881 Query: 896 VAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 V + M L VPL V VG+G +WD A Sbjct: 882 VTALVKDKMATAIELSVPLDVSVGTGRSWDSA 913 >UniRef50_A8R8A1 DNA polymerase I n=2 Tax=unclassified Erysipelotrichaceae RepID=A8R8A1_9FIRM Length = 861 Score = 866 bits (2238), Expect = 0.0, Method: Composition-based stats. Identities = 305/928 (32%), Positives = 493/928 (53%), Gaps = 78/928 (8%) Query: 8 PLILVDGSSYLYRAYHAF---PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 L+L+DG+S L+RAY+A +T S G PT A+YG + M+ + P + V +DA Sbjct: 3 KLLLIDGNSMLFRAYYATLYGRMMTTSNGIPTNAVYGFITMVNKALDMIDPDYVFVAWDA 62 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 TFR ++ YK R + +L Q + + A G+ G+EADD+IG++A++ Sbjct: 63 GKPTFRHTTYKEYKGTRKELDKELIVQFPIVREYLDAAGIKRYECEGIEADDIIGSIAKQ 122 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFL 180 + + I + D+D+ QL+ P + ++ +++ Y + P+ IID Sbjct: 123 HPE--LAIHILSSDRDLLQLIDPTTDVYLMKKGISEIEVMDEAQLMETYTLCPQQIIDLK 180 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 ALMGDS+DNIPGV G+GEKTA LL+ +D +Y +I G + KLE K Sbjct: 181 ALMGDSADNIPGVKGIGEKTAIKLLKEYQSVDNVYEHIAEIKG-------KLKEKLENGK 233 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 E A+LS LATIKTD ++ + + + +P+ L F KYE + + ++ + Sbjct: 234 ESAFLSKFLATIKTDAKIPVDMKTCKRVEPSTT-LHDFFVKYEMNSFAKASAKKEEVKRE 292 Query: 301 GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDS 360 G + + ++K D+ Sbjct: 293 G----------------------------------KRNVVPCVSKELLVDGSVLYANLDA 318 Query: 361 LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN 420 + A L G + A +Y+ D + LE + K+ + Sbjct: 319 ENYYDATLYGFAIAHGNNC--------EYISLEDAKNDTALLEYI-----HTDNGKIVYD 365 Query: 421 LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK- 479 K I + D MLE+++L+ + + D LAE++ T++ E++ GK Sbjct: 366 AKNVYHAWHRNHIAFVPVHRDVMLEAFLLDGMISDY--DKLAEKYAFDCTLSKEDVFGKK 423 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 GK +L + E+A YA + A+ + +++ +L++ K +++ IEMP+V VL Sbjct: 424 GKPKL----VVEEDAAAYAMQCAENLANIEQQLFDELEQ-KDMKELYDTIEMPVVEVLYA 478 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 +E+ GV + L +E ++ L + +E AG EFN++S KQL +L+++ G+ Sbjct: 479 MEKEGVHTSVETLQEIAEATGKKIEALNAQIYEYAGMEFNINSPKQLAVVLYDELGLPCG 538 Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 K ST +VLE+L +P+ ++LE R K+ STY L I K G++HT + Sbjct: 539 K-----KRSTGADVLEKLKPVHPIISLLLEQRKYQKIYSTYAVGLSKHIL-KDGKIHTIF 592 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSR 719 +Q T TGRLSS++PNLQNI VR+EEG+ IR+AF+A + ++SADYSQIELR++AH++ Sbjct: 593 NQIQTQTGRLSSSEPNLQNISVRDEEGKVIRKAFVASPQHTLMSADYSQIELRMLAHMAN 652 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 +K ++ AF +G DIH TA ++F + + V S RRSAK +NFG++YG S FGL+ QL I Sbjct: 653 EKTMIQAFNQGIDIHNQTAMQIFDVDHDHVDSNMRRSAKTVNFGIVYGQSDFGLSEQLGI 712 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 KEA++++D YF YP + +M+ T A +E GYV+T+ GRR Y+ +I N R Sbjct: 713 TMKEAKRFIDKYFASYPNIKTFMDDTIAFCEENGYVKTMFGRRRYIKEINDKNYMMREFG 772 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 +RAA+NAP+QG+AAD+IK AM+ + ++ ++ + RMI+Q+HDEL+F+V D++D + Sbjct: 773 KRAAMNAPIQGSAADLIKLAMVHIYQTMKEKKVKSRMILQIHDELIFDVCDDELDTMKDI 832 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWDQA 927 + Q M+ +L VPL+ E G+ W A Sbjct: 833 VEQGMQQAMQLRVPLIAEASFGKTWYDA 860 >UniRef50_B1BYY4 DNA polymerase I n=4 Tax=Bacteria RepID=B1BYY4_9FIRM Length = 873 Score = 866 bits (2237), Expect = 0.0, Method: Composition-based stats. Identities = 326/934 (34%), Positives = 495/934 (52%), Gaps = 71/934 (7%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAFPPL----TNSAGEPTGAMYGVLNMLRSLIMQYKPT 56 M ++ + L+L+DG+S LYRAY+A + N G PT A+YG NML +++ P Sbjct: 1 MDKMKE--LVLIDGNSLLYRAYYATAAMGNLMVNKDGIPTNAVYGFANMLENILKG-NPE 57 Query: 57 HAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADD 116 + V FD KTFR++LFE YK R PD+L Q + + A G+ + G E DD Sbjct: 58 YIVVAFDYGKKTFRNDLFEVYKGTRSATPDELVCQFSMIREYLTAHGIHYQEIEGYEGDD 117 Query: 117 VIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVP 172 VIGT+A A K V I T DKDM QLV N+++ T + PE+ YG+ Sbjct: 118 VIGTIASIASKKRFKVSIVTSDKDMLQLVDDNVSVYLTKKGVAELEKITPEKFKEMYGLI 177 Query: 173 PELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTM 232 P+ + D LMGD +DNIPG+PGVGEKTA LL+ ++ L +++ G M Sbjct: 178 PDQMRDLKGLMGDKADNIPGIPGVGEKTALKLLKQYHTIENLNDHLDELKG-------KM 230 Query: 233 AAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVE 292 K+ N + LS ++ATI DV +EL + Q EL +++Y + Sbjct: 231 GEKIRDNIDQGLLSKKIATIIKDVPMELDLDDFYYQGFDYNELAEFYRRYNMNSLLKRMS 290 Query: 293 AGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVF 352 + D E T++D + + + + Sbjct: 291 ------------------LANEDNKGE------------TVIDVKIVDCLPIIKRDSSIV 320 Query: 353 AFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDE 412 ++ + + +VG + A YI + + + + + DE Sbjct: 321 VGVFDS---NYHRSLIVGFAI-YNNSEAYYIDIEN-----------AIKCQNFQNFINDE 365 Query: 413 KALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTIT 472 K G ++K +G+E++ FD L SYILN + ++ S+ E + + + Sbjct: 366 SIEKYGYDIKKCINAAKWHGLEIKNYVFDLQLASYILNPSL-KDEIRSVCEYYDYYDVLY 424 Query: 473 FEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMP 532 EE+ GKG + A+ + + A L K L K + ++++++EMP Sbjct: 425 DEEVYGKGAKKKIPETTAI---ADHLIKQAKAIYVLKDKAIEKL-KQENQFDLYKDVEMP 480 Query: 533 LVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFE 592 + +L+ +E G KID VL + + + LEK+ H++A + FN++S KQL +LFE Sbjct: 481 VAKILASMEYQGAKIDKDVLKDLENQFGKEIEVLEKEIHQLANKNFNIASPKQLGEVLFE 540 Query: 593 KQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKT 652 G+ KKT G STS ++L +L +P+ +L+YR L+KL STY L I Sbjct: 541 DLGLPNGKKTKTGY-STSVDILNKLKDVHPIINKVLQYRTLSKLYSTYIIGLQEQIFV-D 598 Query: 653 GRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELR 712 G++HT Y+QA+T TGRLSSTDPNLQNIPV+ EG+ IR+AFI DY +VS DYSQIELR Sbjct: 599 GKIHTIYNQALTQTGRLSSTDPNLQNIPVKTAEGKLIRKAFIPEYDY-LVSFDYSQIELR 657 Query: 713 IMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFG 772 ++AHL+ K L+ AF E KDIHR TA+E+FG+ + V S RR+AKA+NFG+IYGMS FG Sbjct: 658 VLAHLANVKSLIKAFNEDKDIHRHTASEIFGVDEDEVDSTMRRNAKAVNFGIIYGMSDFG 717 Query: 773 LARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSN 832 LA Q+ +P EA+ ++ YFE YP + YM+ K+ GYV T+ R+ ++ +I N Sbjct: 718 LAEQVGVPVNEARNFIKRYFENYPEIKTYMDNNIEFCKKNGYVTTMLNRKRFIREINEKN 777 Query: 833 GARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDD 892 R+ +R A+N+P+QG+AADIIK AMI VD + + +MI+QVHDEL+F+V+K++ Sbjct: 778 YMRQELGKRLAMNSPIQGSAADIIKVAMIKVDELFKKHNLKSKMILQVHDELIFDVYKEE 837 Query: 893 VDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 ++ V + + + M +++V L E NW + Sbjct: 838 LEEVMEVVAKGMTTAVKMNVELKSEGSYAINWYE 871 >UniRef50_Q1RH76 DNA polymerase I n=18 Tax=Rickettsia RepID=DPO1_RICBR Length = 871 Score = 864 bits (2232), Expect = 0.0, Method: Composition-based stats. Identities = 324/927 (34%), Positives = 519/927 (55%), Gaps = 61/927 (6%) Query: 5 PQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 +N L+L+DG +++RAY+A PLT+ GEP GA+YG +ML L+ +KP HAAVVFD+ Sbjct: 3 KKNTLLLIDGYGFVFRAYYAQQPLTSPKGEPVGALYGFTSMLLKLLNDFKPKHAAVVFDS 62 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 GK FR E++ YK++RPP P+DL AQ+ + + + + P+L +G EADD+I T A + Sbjct: 63 GGKNFRHEIYPEYKANRPPPPEDLIAQLPLVRDVARNLNFPILEKNGFEADDIIATFAAK 122 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMG 184 G V++ + DKD+ QL+ N+ + + + + + VV K+GV + + + +AL+G Sbjct: 123 TASIGEEVVVISSDKDLLQLMNDNVKIYDPLKAKYITEDNVVEKFGVTSDKLREVMALIG 182 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 D SDNIPGVP +G KTA +L+ G ++ ++ E+++ + L+ +KE A Sbjct: 183 DKSDNIPGVPSIGPKTASSLITQFGTVENIFNSLEQVSSI------KQRETLQNSKEAAL 236 Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304 +S+QL + +V+++ + LE P +L +Y FK E ++ K Sbjct: 237 ISWQLIGLDYNVDMDFKLDALEWSPPDHNKLTEFLHEYGFKSLYKRAENLFDIKISEHKE 296 Query: 305 AAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNI 364 + + + D I ++ L+A+ K +K +F L N Sbjct: 297 VIEEKAVEIKD-----------------ISNKAELEAFAEKAKKVGIFGIYI----LQNK 335 Query: 365 SANLVGL-SFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKY 423 AN+ + S + + A++ + E +++ LL D+ K+ +LK Sbjct: 336 GANIAFILSLKNQAYIIKISNEANNLFTYNSKADNEWFTDIIFNLLTDQSIKKITYSLKP 395 Query: 424 DRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQ 483 A+ ++ I D L +Y L++ + ++ E+ Sbjct: 396 LLKFYASRAQQITAIE-DLELMNYALSAGLPQKNLFEAVEK------------------- 435 Query: 484 LTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERN 543 + +EEA + D+ Q L++ K +++ I++P+ V+ ++E+ Sbjct: 436 ----EATIEEAAKIVVGFIDLYQQTILEL-----KDNKAFRIYKEIDLPVCFVIDKMEKA 486 Query: 544 GVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTP 603 G+K+D L+ S E + +LE++ ++G +FN+ S KQL ILFEK + K + Sbjct: 487 GIKVDANYLNQLSSEFGAEILKLEEEIFVLSGMKFNIGSPKQLGEILFEKMQLPFGKTSA 546 Query: 604 GGA-PSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 ST ++LE+L+ YP+ ++L +R L KLK+TYTD LP I+ T R+HT++ Q Sbjct: 547 KANSYSTGADILEKLSEQGYPIADLLLRWRQLTKLKNTYTDSLPKQIDNITRRIHTTFLQ 606 Query: 662 AVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDK 721 T TGRLSS +PNLQN+P+R+ EG +IRQAF+A + Y ++SADYSQIELRI++H++ K Sbjct: 607 TSTTTGRLSSQEPNLQNVPIRSGEGNKIRQAFVAEQGYKLISADYSQIELRILSHIADIK 666 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 L AF DIH TA ++F L E +TSE RR AKAINFG+IYG+SAFGLA+QLN+ Sbjct: 667 ALKQAFINKDDIHTQTACQIFNLQKEELTSEHRRKAKAINFGIIYGISAFGLAKQLNVSN 726 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 EA +Y+ YF Y GV EYME T++ A+ GYV GR+ ++P I + + AER Sbjct: 727 TEAAEYIKKYFAEYKGVQEYMEATKSFAQANGYVTDFFGRKCFVPLIN--DKRLKQFAER 784 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 AAINAP+QGT ADIIK AM +D ++ + + R+++Q+HDEL+FE D+++ + I Sbjct: 785 AAINAPIQGTNADIIKIAMTLLDREIEKRKLKTRLVLQIHDELLFEAPIDEIETIMPIIK 844 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQAH 928 Q+MEN T +DVP++ E+ +G NW + H Sbjct: 845 QIMENSTNMDVPIITEIRAGNNWMEIH 871 >UniRef50_Q1II21 DNA polymerase I n=2 Tax=Acidobacteria RepID=Q1II21_ACIBL Length = 929 Score = 863 bits (2231), Expect = 0.0, Method: Composition-based stats. Identities = 329/947 (34%), Positives = 493/947 (52%), Gaps = 79/947 (8%) Query: 7 NPLILVDGSSYLYRAYHAF---PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + L+D +++RAYHA P++ G PT A Y +NML L + P H A + Sbjct: 33 GRVFLIDTFGFVFRAYHAMARQRPMSTKTGIPTSATYVFVNMLNKLRQDFAPEHIAAIM- 91 Query: 64 AKGKTFRDEL---------------------FEHYKSHRPPMPDDLRAQIEPLHAMVKAM 102 GKTFRDE + YK++R MP+DL Q+ + + A Sbjct: 92 EGGKTFRDEEAAAVATINKFDIKTQTFQEIAYGGYKANRTEMPEDLTQQMPYIERALNAY 151 Query: 103 GLPLLAVSGVEADDVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTIL-G 161 +P+++ G EADDVIGTLA++A G PV I + DKDM QLVT + ++N + ++ Sbjct: 152 RIPMISAEGFEADDVIGTLAKKAADGGYPVYIVSSDKDMMQLVTERVCILNPPKDNLICD 211 Query: 162 PEEVVNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKI 221 P++V GVPPE ++D +AL GDS DN+PG PG+G+K + L+Q G ++ ++ Sbjct: 212 PKKVEEILGVPPERVVDVMALRGDSIDNVPGAPGIGDKGSVQLIQRFGTVEAALDHAGEV 271 Query: 222 AGLSFRGAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKK 281 +K L+QN++ S ++ TI+TD+++ + + Q P E LF + Sbjct: 272 ------ESKRQRESLQQNRDAVLFSKRMVTIRTDIDMPFEPQAMRAQDPDYEACKALFAE 325 Query: 282 YEFKRWTADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKA 341 EF + S + + + V I + Sbjct: 326 LEFNNLLKQF----LTEGSEVGETDYADAKSTDEIKALLRDVNADHPLAVAIAHLDAPSL 381 Query: 342 WIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERA 401 + E + + + ++ + G A + + + + Sbjct: 382 AAEEAEPEEDAPQLALAMAEPVATPQVTSVALSSREGAARAVEL------------KGES 429 Query: 402 LELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSL 461 E+++ L D K + K G+ L + DTML Y+L+ + + + Sbjct: 430 GEVVRRALADPTVPKAVHDAKAAMHA----GLPLESVEHDTMLYEYLLDPTYTTYRLPDV 485 Query: 462 AERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKG 521 R L K E AD+T +L K+ L + G Sbjct: 486 VLRRLNLKL------------------------AGTLPEAADMTHRLTTKL-HKLVEDGG 520 Query: 522 PLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLS 581 + V+E+I+ PLV VL +E GVK+D VL S L L +K + ++G+EFN++ Sbjct: 521 LMKVYEDIDRPLVTVLYAMEAAGVKLDCDVLAEMSTRLQRDADALARKIYGLSGQEFNIN 580 Query: 582 STKQLQTILFEKQGIK-PLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTY 640 S KQL +LF K + P+K G ST+ +VLE LA ++ +PK++LEYR KLKSTY Sbjct: 581 SPKQLGDVLFNKLNLPKPVKYGKGKTISTAVDVLEGLAGEHEVPKLVLEYRQFTKLKSTY 640 Query: 641 TDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYV 700 D LP + + TGR+HT++ QA T+TGRLSS +PNLQNIP+R E GR IR AF+A + V Sbjct: 641 VDALPNLCHAGTGRLHTTFAQAATSTGRLSSVNPNLQNIPIRTELGREIRAAFVAEKGNV 700 Query: 701 IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAI 760 +++ADYSQIELR++AH S+D+ L+ A+ +DIH TA+EVFG+P + +E RR AKA+ Sbjct: 701 LLAADYSQIELRLLAHFSQDRLLVDAYNNDRDIHALTASEVFGVPPMMIDAEHRRRAKAV 760 Query: 761 NFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDG 820 NFG++YG+S FGL++QL I KE+++Y++ YFERY GV E++ Q ++ V TL G Sbjct: 761 NFGIVYGISPFGLSQQLGIDTKESKRYIESYFERYSGVREWLNSVLEQVRKDEKVSTLFG 820 Query: 821 RRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQV 880 R +PDI S N R AER A N P+QGTAAD+IK AMI + L + + RM++QV Sbjct: 821 RIRPIPDIHSRNPNLRGFAERTATNTPLQGTAADLIKLAMIRIHRDLIERKLKTRMLLQV 880 Query: 881 HDELVFEVHKDDVDAVAKQIHQLMENC-TRLDVPLLVEVGSGENWDQ 926 HDELVFEV + +V+ V + MEN L VPL V+VG G+NW Sbjct: 881 HDELVFEVPQAEVEEVRALVQDRMENVHPELTVPLKVDVGVGKNWRD 927 >UniRef50_D0WFK8 DNA polymerase I n=2 Tax=Coriobacteriaceae RepID=D0WFK8_9ACTN Length = 905 Score = 861 bits (2225), Expect = 0.0, Method: Composition-based stats. Identities = 345/936 (36%), Positives = 496/936 (52%), Gaps = 42/936 (4%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPPLTNS-AGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 +P+ + ++DG+S ++RAYHA PP N+ G PT A +G ++ML +P F Sbjct: 1 MPR-TIAVIDGNSLMHRAYHAVPPTMNAVDGTPTNAAFGFMSMLLKFYEDARPDAIVCAF 59 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 DA T R E + YK+ RPPM D+LR Q + ++ AMG+P++ V G E DD++GT+A Sbjct: 60 DAGKPTHRIEAMKAYKAQRPPMDDELRVQFPVIEGLLDAMGIPVVKVKGWEGDDILGTIA 119 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIID 178 E G L+ TGDKD QLV+ + ++ T I GP+EV+ +YGV D Sbjct: 120 ARDEALGWNTLLVTGDKDAYQLVSDHTRVVTTRKGITDVVIYGPDEVLERYGVTAAQFPD 179 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 FL L GD++DNIPGVPG+G KTA LLQ G +D +Y +K+ G L Sbjct: 180 FLGLQGDTADNIPGVPGIGPKTATKLLQAYGSMDGIYKNLDKLKG-------KQLQNLAD 232 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 N++ AYLS LA I D++ EL E AA + F +F A V A + Sbjct: 233 NRDQAYLSRDLAVIVQDLDFELDLESAAFPSFAASAVAEAFGAVQFSSHLARVLA--LIG 290 Query: 299 AKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTET 358 +G P+A E D A A + L+AW+A A E Sbjct: 291 GEGDLPSAASIELPDIDPATGDAARAL-------------LEAWLAPRADAVPSMLADEG 337 Query: 359 DSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKP----LLEDEKA 414 + + + E A++ HD + ++ + +++ L+ + Sbjct: 338 ALVLGVEVVEPAQASLFESACIAFVSDGHDVVRFENEDAIAAVARIVRDGCFCTLDAKAT 397 Query: 415 LKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFE 474 ++ R L AFD L +Y+L S A +D +L E +L F+ Sbjct: 398 MQRAYPPDSSREAFVAPAELLSARAFDIGLSAYLLQSNASSYDYATLCEEYLAASLPAFD 457 Query: 475 EIAGKG-KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPL 533 + + + ++A G A + + + + G + + +I++PL Sbjct: 458 DACDEACAHAFVAPRLARALDGAMACDAEEASPDGTS------GRSVGTRSCYYDIDLPL 511 Query: 534 VPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEK 593 VPVL+ +ER G +ID L + + + + E+AGEEFNL S KQL +LFEK Sbjct: 512 VPVLAVMERVGARIDVDALAEMGRSVAEEIDGIRTRVFELAGEEFNLDSPKQLSVVLFEK 571 Query: 594 QGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTG 653 G+ KKT G ST + L +L +P+ + IL YR LAK++STY + LP M G Sbjct: 572 LGLPHGKKTQRGY-STDAKTLSKLEDVHPIAREILRYRELAKMESTYIEALPRM-RAGDG 629 Query: 654 RVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIELR 712 VHT ++Q VT TGRLSS+DPNLQNIPVR E GRRIR F+ + +SADYSQIELR Sbjct: 630 LVHTHFNQTVTTTGRLSSSDPNLQNIPVRTEFGRRIRGCFVPLRTGDLFMSADYSQIELR 689 Query: 713 IMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFG 772 ++AHLSRD+ L+ AF G D H +TAA VFG+PLE VT R AKA+NFG++YG AFG Sbjct: 690 LLAHLSRDEHLVHAFCSGADFHASTAARVFGVPLEEVTPSMRSRAKAVNFGIVYGQQAFG 749 Query: 773 LARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSN 832 LA+ L I KEAQ+ +D YFE YPGV +++ T + + GY T+ GRR ++P++K+ N Sbjct: 750 LAQNLGIGFKEAQEMIDRYFEAYPGVRAFLDGTVEEVRACGYATTMFGRRRHIPELKAKN 809 Query: 833 GARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDD 892 A+R ER A+N PMQG+AADI+K AM V L ++++QVHDEL V + Sbjct: 810 PAQRGFGERTAMNHPMQGSAADIVKMAMNEVQRRLVDGGFAAQVMIQVHDELDLSVPVSE 869 Query: 893 VDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 +DAV + M N L+VPL+V+V S + W +AH Sbjct: 870 LDAVGALVRDAMTNVVTLEVPLIVDVQSAKTWAEAH 905 >UniRef50_B0PCZ2 DNA polymerase I n=3 Tax=Clostridiales RepID=B0PCZ2_9FIRM Length = 874 Score = 858 bits (2218), Expect = 0.0, Method: Composition-based stats. Identities = 336/939 (35%), Positives = 486/939 (51%), Gaps = 78/939 (8%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 M P L+ VDG+S L RAY+ LT GE T +YG L++L ++ + +P AV Sbjct: 1 MRGWPAVKLLAVDGNSILNRAYYGIKALTTKNGEFTNGIYGFLSILLRVLDEAEPDAVAV 60 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 FD + TFR +L++ YK+ R MP +L +Q+EPL ++ A+G ++ G EADD++GT Sbjct: 61 AFDLRAPTFRHKLYDGYKAQRKGMPHELASQLEPLKELLGALGFQIVTCEGYEADDILGT 120 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN------TILGPEEVVNKYGVPPE 174 LAR + + G +I+TGD+D QLV P++++ T T+ V KYGV P Sbjct: 121 LARSSAETGWDCVIATGDRDSLQLVGPHVSVRLATTKMGQPASTLYDETAVREKYGVEPA 180 Query: 175 LIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAA 234 ++D ALMGD+SDNIPGV G+GEKTA +L+ +D +YA+ + + + Sbjct: 181 QLVDVKALMGDASDNIPGVAGIGEKTALSLIGQYHDIDAIYAQLDTL-----EIKPGVRK 235 Query: 235 KLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELL------GLFKKYEFKRWT 288 KL + KE+AY S +L I D ++ + + +FK E RW Sbjct: 236 KLGEGKEMAYTSRKLGEICCDAPIDASPAAYRRAPVDQAKAAALLARLEMFKMME--RWG 293 Query: 289 ADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEK 348 D A + GA P ET+ P I Sbjct: 294 VDPAAARETAGGGAAP-----ETAREPSRPMRAEADAPDLAQRVI--------------- 333 Query: 349 APVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPL 408 A L+F ++ +A PD E L+PL Sbjct: 334 ----------------KAGAADLAFGLDGNG----DIAAVAAALPDGTLLLSGGETLEPL 373 Query: 409 LEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKH 468 L L+V + K + G+ L + FD L +Y+L+ + +D L ++ Sbjct: 374 LAAGVKLRVW-SSKPLHRMAYRRGVHLENVTFDGELAAYLLSPTSAGYDPVQLCAQY--- 429 Query: 469 KTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFEN 528 + + + E A A L K+ ++++H+ + Sbjct: 430 ------------ATETRALEGEIPEQYAALAAQAAALSALLDKLTDEIREHE-QEKLLYE 476 Query: 529 IEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQT 588 IEMPL VL+ +E G +D + L ++ EL R+ E E AG +FNL+S KQL Sbjct: 477 IEMPLARVLAGMECEGFALDTQALRDYGGELDDRIDETHAAIVEYAGYDFNLNSPKQLGD 536 Query: 589 ILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMI 648 +LF K G+ KKT G ST+ +VLE L +P+ ILEYR L+KLKSTY D L ++ Sbjct: 537 VLFVKLGLPAKKKTKTGY-STNVDVLEALRPQHPIIGEILEYRKLSKLKSTYVDGLLKVV 595 Query: 649 NPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQ 708 P GRV +++ Q T TGR+SST+PNLQNIP+R EEG R+R+ F A + +V ADYSQ Sbjct: 596 GP-DGRVRSTFQQTETRTGRISSTEPNLQNIPIRTEEGSRMRRFFTARPGWKLVDADYSQ 654 Query: 709 IELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGM 768 IELR++A L+ D+ ++ AF G+DIH TAA+VFG+P TVT R AKA+NFG++YG+ Sbjct: 655 IELRVLADLADDQNMIAAFQSGEDIHATTAAQVFGMPGGTVTPLMRSRAKAVNFGIVYGI 714 Query: 769 SAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDI 828 AF L++ + + EA Y+ Y Y GV +YME T A A+E GYV+TL GRR YLP++ Sbjct: 715 GAFSLSQDIGVTVSEADSYIKSYLAHYAGVRKYMEDTIAFARENGYVKTLFGRRRYLPEL 774 Query: 829 KSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEV 888 +SN +A ER A N P+QGTAADIIK AM+ V L+ E R R+I+QVHDEL+ E Sbjct: 775 AASNKVTQAFGERVARNTPIQGTAADIIKIAMVRVFERLRREGLRARLILQVHDELLVEA 834 Query: 889 HKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 D++D + + ME+ L VPL + G+NW A Sbjct: 835 PDDEIDRARAILKEEMEHAIALKVPLEADTNVGDNWLAA 873 >UniRef50_B5YG86 DNA polymerase I n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YG86_THEYD Length = 838 Score = 858 bits (2217), Expect = 0.0, Method: Composition-based stats. Identities = 319/916 (34%), Positives = 501/916 (54%), Gaps = 85/916 (9%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 + LVDGS ++YRAYHA L+ S G PT A+YG ML L+ + + FD+ T Sbjct: 4 IYLVDGSCFIYRAYHAIKGLSTSRGIPTNAIYGFTRMLLKLLREKNVKYILCAFDSPHPT 63 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK- 127 R +++E YK RP P DL QI+ + ++ A+G+ + V G EADD+I T + Sbjct: 64 KRHKIYEEYKITRPETPKDLPVQIDYIKQIIDALGITRIEVPGYEADDIIATAVGVINQF 123 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSS 187 A +I + DKDM QLV+ N+ + + + I+ E V+ KYGVPPE + DF+AL+GD+ Sbjct: 124 APLNFIIISIDKDMLQLVSDNVKIYDPINELIIDREYVIKKYGVPPEKLNDFMALVGDAI 183 Query: 188 DNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSY 247 DNIPGV G+GEKTA L++ G ++ + + I L ++ +++N + LS Sbjct: 184 DNIPGVKGIGEKTAANLIKRYGSIENILKNLDIIKPL------KVSDIIKKNIKSLQLSK 237 Query: 248 QLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAK 307 +L ++ D +E+ + L+++Q E+L+ +F++ EF + Sbjct: 238 ELVILRKDTPIEIKLDDLKIKQQDREKLVQIFRELEFNTLLKQI---------------- 281 Query: 308 PQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISAN 367 + D + +V+ + L E + I +EK + + T + D+I A Sbjct: 282 -----IKDFPNHSSCSVLQLN-----LASENRRNTIELIEKIKEYGKFSVTFNKDSIIAG 331 Query: 368 LVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGI 427 + G + I A + L + LK+ N K Sbjct: 332 VNGTLYEI----------------AFNDTRVNEIL--------SSEILKIIYNAKEALKK 367 Query: 428 LANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFN 487 L N G++L FD M+ +Y++N G++++D L + E I Sbjct: 368 LKNSGLKLSPPYFDLMIVAYLINPNRGKYNIDELILEYTGKFYENAENIN---------- 417 Query: 488 QIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKI 547 +L+ K+ +L K K N++ +IEMPL+ VL +E G+K+ Sbjct: 418 ---------------FYMFELYEKLNKEL-KEKELENLYFDIEMPLIEVLFDMEETGIKV 461 Query: 548 DPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAP 607 + + L ++ +++ L ++++K + IAG EFN++S KQL +L+++ G+K K+ A Sbjct: 462 NIEKLETLTKHISMELDKIKEKIYTIAGTEFNINSPKQLAEVLYDRLGLKTRKRGKK-AR 520 Query: 608 STSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATG 667 ST EVLEELA+ + LP ++ YR L KL + Y L INP+T R+HT + Q V TG Sbjct: 521 STEMEVLEELAIQHELPHEVINYRTLNKLLTGYLIPLRDYINPETKRIHTKWSQTVAGTG 580 Query: 668 RLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAF 727 R+ S++PNLQNIPV+ E +R+ FI Y+ +SADYSQIELR++AH+S D L+ AF Sbjct: 581 RIVSSEPNLQNIPVKGEWAEFLREVFIPENGYMFLSADYSQIELRLLAHMSEDPALIKAF 640 Query: 728 AEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKY 787 +GKDIH ATA+E+F +P VT E RR AK +NFG+ YG+S FGL+ + IP ++A++ Sbjct: 641 LDGKDIHTATASEIFSIPENAVTDEHRRIAKTVNFGISYGISPFGLSESIKIPYEKAEEL 700 Query: 788 MDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAP 847 ++LYF RYP V +++E T + A++ GYV TL GR LP+I S N R +ER A+NA Sbjct: 701 IELYFLRYPMVRKFIEETISFAQKNGYVRTLFGRIRPLPEINSPNQFLRMQSERMAVNAR 760 Query: 848 MQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENC 907 +QGTAADIIK AMI + L+ E+ ++I+Q+HDE+V EV + ++ V++ + M++ Sbjct: 761 VQGTAADIIKIAMIRIYNRLKKEKLNAKIILQIHDEIVLEVEQKVIEKVSEIVQNEMKD- 819 Query: 908 TRLDVPLLVEVGSGEN 923 L VPL V V SG + Sbjct: 820 FSLSVPLEVNVFSGNS 835 >UniRef50_C8W7U1 DNA polymerase I n=3 Tax=Coriobacteriaceae RepID=C8W7U1_ATOPD Length = 912 Score = 857 bits (2215), Expect = 0.0, Method: Composition-based stats. Identities = 335/933 (35%), Positives = 495/933 (53%), Gaps = 57/933 (6%) Query: 5 PQNPLILVDGSSYLYRAYHAFP-PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 P+ + ++DG+S ++RA+HA P+ G PTGA++G NM L+ + P FD Sbjct: 26 PRRTIAVIDGNSLMHRAFHAIRQPMAAPDGTPTGALFGFFNMFIKLVESFSPDGVICAFD 85 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 R ++ YK+ RPPM L AQ + ++K + +P+ + G E DD++GTLAR Sbjct: 86 KGKPQIRIDMLPQYKAQRPPMDPALHAQFPVVKELLKTLDVPVCQLEGWEGDDILGTLAR 145 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKY-GVPPELIID 178 E G +L+ TGD+DM QL T N+ +++T I+ PE V + Y G+ PEL+ D Sbjct: 146 RGEAEGYQMLLFTGDRDMYQLSTENVKIVSTRKGVSDVSIMTPETVADLYAGITPELVPD 205 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 F L GDSSDNIPGVPG+G K A AL+ G LD + A +++ G + L Sbjct: 206 FYGLKGDSSDNIPGVPGIGPKKAAALIVEYGSLDEVIAHADEVKG-------KVGENLRA 258 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 + + A LS ++ATI+TD L++ + + +++ F F T+ + Sbjct: 259 HIDDALLSRKVATIRTDAPLDINLDDAKFPTFDPNDVVKAFSALGFTGMTSRLA----RM 314 Query: 299 AKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWI--AKLEKAPVFAFDT 356 A G+ Q S P + + + D + + WI A+ A A + Sbjct: 315 AGGSASGVTAQTASATPALPIPSEFLQAGDASAALTAALENQEWIGVAEDSAADTGALFS 374 Query: 357 ETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALK 416 + +L +S L F E AA + + + A D + + L + P+ E Sbjct: 375 LSHTL-WVSTEKALLKFEGENATAALLRILREARVAADDV--KALLHEVSPVDSSEPQ-- 429 Query: 417 VGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEI 476 K D + + FDT + +Y+L S D++ L E + + + Sbjct: 430 -----KLDIETIDS------DRLFDTGVAAYLLESDRSSFDINGLVELYFGSELPEPTDE 478 Query: 477 AGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPV 536 + + + + L + G L +F ++EM L+PV Sbjct: 479 IPAAALRAVAARALV------------------PVLTKKL-EDDGSLELFTSLEMQLLPV 519 Query: 537 LSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGI 596 L+ +ER G+ +DP+ L S +L +A+ H+ AGE+FNL S QL ILF+ + Sbjct: 520 LAAMERRGLYVDPQKLAEQSAQLGEDIAQRVASIHQTAGEDFNLDSPSQLSHILFDVLKL 579 Query: 597 K--PLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGR 654 LKKT G ST+ +VL ELA +Y + +LEYR AK+KSTY D LP +I R Sbjct: 580 PTYGLKKTRTGFYSTNAKVLGELAQEYQIVADVLEYRERAKIKSTYLDALPSLIR-GDKR 638 Query: 655 VHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIM 714 +HT+ +Q VTATGRLSS+DPNLQNIP R+E G R+R AF PE V ++ DYSQIELR++ Sbjct: 639 IHTTLNQTVTATGRLSSSDPNLQNIPTRSELGHRVRTAFTVPEGSVFLACDYSQIELRLL 698 Query: 715 AHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLA 774 AHLS D+ L+ AF G D H ATAA VFG+P+E VT R AKA+NFG++YG AFGLA Sbjct: 699 AHLSADEHLVAAFNSGADFHAATAARVFGVPVEEVTPALRSRAKAVNFGIVYGQQAFGLA 758 Query: 775 RQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGA 834 L I RKEAQ+ +D YF+ YPGV Y++ + A E GY T+ GR+ ++ + SN Sbjct: 759 TSLKISRKEAQEMIDRYFDAYPGVRAYLDDSVRTAHECGYAITMYGRKRHIREFNQSNRQ 818 Query: 835 RRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVD 894 A ER A+N PMQG+AADIIK AMI V+ L+ E ++I+Q+HDEL EV + +++ Sbjct: 819 LIAFGERTAMNHPMQGSAADIIKIAMINVEKRLRDEGLTSKLILQIHDELDLEVPESEIE 878 Query: 895 AVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 V+ + + ME+ L VPL+ +V G NW +A Sbjct: 879 TVSTLVKETMEDVVTLRVPLIADVSYGSNWAEA 911 >UniRef50_UPI00016BFC66 DNA polymerase I n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016BFC66 Length = 865 Score = 856 bits (2212), Expect = 0.0, Method: Composition-based stats. Identities = 343/927 (37%), Positives = 499/927 (53%), Gaps = 71/927 (7%) Query: 8 PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 ++LVDG S YRA++ P L+ G T A+YG L +L +L+ ++P AV FD Sbjct: 2 KIMLVDGFSIAYRAFYGMPLLSTKEGIFTNAIYGFLKILFNLLDTHQPDALAVAFDFAAP 61 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 TFR + YK+ R PMP +L+ QI L ++ AMG+ ++ G EADD++GTLA A Sbjct: 62 TFRHQYALTYKATRKPMPSELQPQIPLLQDLLSAMGISHISAPGFEADDILGTLATAAAA 121 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTNTILGP------EEVVNKYGVPPELIIDFLA 181 A VLI +GD+D+ Q+ T +I + T +VV KYGV P +ID A Sbjct: 122 AKHDVLIVSGDRDLLQIATDSIQIXIPKTKQTGTEIESYYAADVVAKYGVIPTELIDVKA 181 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGD+SDNIPGV GVGEKTA L+ +DTLYA E I G + L K+ Sbjct: 182 LMGDASDNIPGVKGVGEKTALKLIAEYKNIDTLYANLENIKGA------KLKENLATYKD 235 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 AY S LATIK D+ + T + + + LF+K EFK A Sbjct: 236 SAYDSKFLATIKIDIPINFTLQDFSFKLEDNLAVRELFEKLEFKSLLTKFSA-------- 287 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 A + + VT+ L A L+ A VFA E D+L Sbjct: 288 -----------------IPAAPQVDVASIVTVSTTSVL----ADLDTAAVFAV-LENDTL 325 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 + G Y A+ +++E + +K E + K+ N Sbjct: 326 YM----------GVADGSNCYFIAAN--------LAQEYDIIAVKNFFEAKNISKILHNS 367 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 K R IL Y I + G FDT + SY++N + +++ A + +++ G GK Sbjct: 368 KDLRHILYRYQINIHGNIFDTAIASYLINPLQSDYELSVAAT---GYDIKHVDQLLGTGK 424 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 N++T+ +A A L +L L++F +IEMPL+ VL +E Sbjct: 425 NKITWASLASXIIVAQLGARASAMWTLQTAQLKEL-TDASMLDLFYDIEMPLIEVLFDME 483 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 G+ +D L ++L +A LE+ + +A E+FN+SS+KQL ILF+K GI KK Sbjct: 484 IAGITVDAAFLTAFGKKLDALIATLEQDIYSLADEKFNISSSKQLGLILFDKLGIPAGKK 543 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 T G ST+ +L++L Y + +LEYR KL STY L +++ K ++H++++Q Sbjct: 544 TKTGY-STAANILDKLKDKYVIVAKVLEYRQYKKLHSTYVVGLLKLLD-KNNKLHSTFNQ 601 Query: 662 AVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQIELRIMAHLSRD 720 VTATGR+SS +PNLQNIP+R G+ IR+AFI +DYV + ADYSQIELR++A LS D Sbjct: 602 TVTATGRISSAEPNLQNIPIRLALGKEIRRAFIPSNDDYVFLDADYSQIELRVLASLSAD 661 Query: 721 KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 + AF EG DIH +TA+EVFG ++TVT QR +AKA+NFG++YG+SAF LA + + Sbjct: 662 ANMQRAFLEGIDIHTSTASEVFG--VDTVTQAQRNAAKAVNFGVVYGISAFSLADDIQVS 719 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 +EA +Y++ YF +YP V Y++ ++ GY TL R+ + ++ SSN + + Sbjct: 720 NQEATEYIENYFAKYPNVKHYLDSLITTSQATGYGVTLLNRKRNIVELFSSNFNTKEYGK 779 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 R A+N P+QGTAADIIK+AMI V L+ R +I+ VHDEL+ EVHK +++ + K + Sbjct: 780 RIAMNMPIQGTAADIIKKAMIQVHNALK--GTRSTLILTVHDELLLEVHKSEIEHITKLL 837 Query: 901 HQLMENCTRLDVPLLVEVGSGENWDQA 927 ME+ +L VPLLV+V SG +W A Sbjct: 838 KTEMESAVKLAVPLLVDVKSGXSWFAA 864 >UniRef50_D0L9T3 DNA polymerase I n=2 Tax=Corynebacterineae RepID=D0L9T3_GORB4 Length = 949 Score = 856 bits (2211), Expect = 0.0, Method: Composition-based stats. Identities = 332/968 (34%), Positives = 494/968 (51%), Gaps = 89/968 (9%) Query: 6 QNPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + L+L+DG S YRA+ A P + G+ T A+YG +ML +L+ +PTH A FD Sbjct: 23 KPVLMLLDGHSLAYRAFFALPAENFKTATGQTTNAVYGFTSMLINLLRDEEPTHIAAAFD 82 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 KTFR E++ YK+ R PD+ Q++ ++ A+G+P++A+ G EADD+I TLA Sbjct: 83 VSRKTFRSEMYPAYKAQRSKSPDEFNGQVDLTKEVLDALGIPVMAIEGYEADDIIATLAT 142 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDF 179 +A+ G VL+ TGD+D QLV ++T++ T P EV KYG+ P D+ Sbjct: 143 QADAEGYSVLVVTGDRDSLQLVNDSVTVLYPRKGVSELTRFTPAEVEKKYGLTPTQYPDY 202 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 AL GD SDN+PG+PGVGEKTA ++ G L +L +++ G + L N Sbjct: 203 AALRGDPSDNLPGIPGVGEKTASKWIREYGSLASLVDHVDEVKG-------KVGDALRAN 255 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 + QL + D++L ++L + + + LF EF+ + Sbjct: 256 LASVQTNRQLTELVRDMQLPAGPDELAMVGWDRDRIHQLFDDLEFRVLRDRL-------- 307 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 +A P+ S D +L + ++AW+A+ T Sbjct: 308 FSTLSSATPEAESGFDLDG-------------AVLGQGEVRAWLAEHAGTGRSGLAV-TA 353 Query: 360 SLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQ 419 + A+ GL+ A G +AY+ V D ++ L D K Sbjct: 354 PHVVVGADPTGLAIAAADGTSAYVDVTAVDADDEQALAD---------WLADPAMGKALH 404 Query: 420 NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 +K+ L + G L G+ DT L +YI+ ++D LA R+L+ + + ++ +G Sbjct: 405 EVKWGIHALRSRGWTLAGVTSDTSLAAYIVRPGQRTFNLDDLALRYLRRE-LRADDGSGD 463 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 G+ L + + +A ++L + +L + L + +E+PL VL+ Sbjct: 464 GQLSLLDDDGGAAKLAEQHMLEARAVVELAEVLDTELDRIDS-LPLLTEMELPLAFVLAD 522 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 +E G+ +D + R+ A+++ GE+ NL S KQLQT+LF+K + Sbjct: 523 LEAAGIAVDVDHFGELEKNFAQRIRVAANAAYDVIGEQINLGSPKQLQTVLFDKLDMPKT 582 Query: 600 KKTPGGAPSTSEEVLEEL--ALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHT 657 KKT G + + L+ L ++P +LE+R +LK T D L + GR+HT Sbjct: 583 KKTKTGYTT-DADALQALYEKTEHPFLAHLLEHRDATRLKVT-VDGLLKSV-ADDGRIHT 639 Query: 658 SYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA---------------------- 695 +++Q + ATGRLSST+PNLQNIPVR GR IRQ FI Sbjct: 640 TFNQTIAATGRLSSTEPNLQNIPVRTAAGREIRQGFIVGAGSGASGDGGVGAGSGASGPD 699 Query: 696 ---------------PEDY-VIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAA 739 + + +++ADYSQIE+RIMAHLS D GL+ AF G+D+H + Sbjct: 700 GVGAGSGSSGHDGGTGDGFDCLMTADYSQIEMRIMAHLSEDAGLIEAFNTGEDLHNFVGS 759 Query: 740 EVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVL 799 FG+P++ VT+E R KA+++GL YG+SAFGLA QL I R EA++ MD YF R+ GV Sbjct: 760 RAFGVPIDEVTTEMRHRVKAMSYGLAYGLSAFGLAAQLKISRDEAKEQMDAYFARFGGVR 819 Query: 800 EYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRA 859 +Y+ A+A+ Y TL GRR YLPD+ S N RR +AER A+NAP+QGTAADIIK A Sbjct: 820 DYLHDVVAEARRNEYTATLFGRRRYLPDLNSDNWQRRQSAERMALNAPIQGTAADIIKVA 879 Query: 860 MIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVG 919 MI V LQ+E+ R RM++QVHDELV EV + DAV + + M L VPL V VG Sbjct: 880 MINVHKRLQSEELRSRMLLQVHDELVVEVATGERDAVEAVVREEMGAAITLSVPLEVSVG 939 Query: 920 SGENWDQA 927 G +WD A Sbjct: 940 FGRSWDDA 947 >UniRef50_A8FKC7 DNA polymerase I n=20 Tax=Campylobacter RepID=A8FKC7_CAMJ8 Length = 879 Score = 855 bits (2209), Expect = 0.0, Method: Composition-based stats. Identities = 319/924 (34%), Positives = 489/924 (52%), Gaps = 52/924 (5%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L ++D + +R Y+A NS G+ +G + G N + SL ++K + D+KG Sbjct: 2 KTLTIIDTFGFFFRLYYALKGFKNSQGQASGMISGFANFIYSLKNEHKSDYIVFALDSKG 61 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 KTFR E+ +YK +R P P +L QI M++ MG ++ G EADD+I + R E Sbjct: 62 KTFRSEIDPNYKQNRTPPPPELLEQIPICIEMIEKMGFISVSQEGYEADDIIASFVRTCE 121 Query: 127 KAGRPVLISTGDKDMAQLVTP-NITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185 V I T DKD+ QL+ ++ + ++ + KYGV P I DFLAL GD Sbjct: 122 DRDIFVRIITQDKDLYQLIKDGKTSIYSPISKNDYDEAACLEKYGVKPHQIRDFLALCGD 181 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 SSDNIPGV G+G K A+ LL G ++ +Y + R L + KE A+L Sbjct: 182 SSDNIPGVKGIGAKGAKTLLDEFGSIEGIYENLTLVRNERSRNL------LLEGKENAFL 235 Query: 246 SYQLATIKTDVELELTCEQLEVQQPAA-EELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304 S +LA++ ++E++ E+ ++L + + YE + + K Sbjct: 236 SKKLASLYENLEVQDLIEKATYPDEEPLLKILEILEHYELNTLLKKLRQNPDNKDKNLGF 295 Query: 305 AAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNI 364 A I DE L + L+K + AFDTET LD Sbjct: 296 KAT------------------------LIQDENKLFEILNTLDKESIIAFDTETTGLDTK 331 Query: 365 SANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYD 424 A +VG SF + A Y+P+ H+YL +QIS + A + ++ + +G NLKYD Sbjct: 332 EAKIVGFSFCMSENEAFYVPLTHNYLGVGEQISLQSAKKAIEVIFNHF---VIGHNLKYD 388 Query: 425 RGILA-NYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQ 483 I+ N+G+ L DTM+ +++ N R +MD LA R ++T+ FE + KG+N Sbjct: 389 FKIIQNNFGLNLPQKYADTMILAWLKNPSL-RVNMDDLALRLFNYETLHFESLVKKGEN- 446 Query: 484 LTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERN 543 F + LE+A +YAAEDA +TL+ +L +L+ L + +N E + ++ +E N Sbjct: 447 --FASVELEKACKYAAEDAYITLRFYLYFLKNLET--PLLELAKNCEFDFIKIIMMMEEN 502 Query: 544 GVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTP 603 G+K+D L ++ + L ++ + + + FNL+S KQ+ ILFEK + KK Sbjct: 503 GIKLDTNALEILMKKFENEIKNLSEEIYTLCEDRFNLNSPKQVGDILFEKLKLPSGKKGK 562 Query: 604 GGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLM-INPKTGRVHTSYHQA 662 G ST E+VL L +P+ IL+YR LAKL STY + L + + K R+++S+ Q Sbjct: 563 TGY-STDEKVLNALLDKHPVIAKILDYRELAKLYSTYCEPLLKLALKDKNSRIYSSFLQT 621 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKG 722 TATGRLSS DPNLQNIP + + + F+A + + +S DYSQIELR++AH S D+ Sbjct: 622 GTATGRLSSKDPNLQNIPAHGQYAKDYKSCFVAKDGFSFISLDYSQIELRMLAHFSEDEK 681 Query: 723 LLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRK 782 LL AFA +DIH TA +FG E R AK+INFGLIYGM L++ L I Sbjct: 682 LLNAFANDEDIHARTAIMIFG----ESNYETRSVAKSINFGLIYGMGYKTLSQNLKIEAH 737 Query: 783 EAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERA 842 A+ Y++ YFE + + +Y E + +AK+ G++ TL GR+ Y D +++ + A ER Sbjct: 738 LAKSYIEKYFENFTSIKKYFETVKNKAKQNGFITTLSGRKRYF-DFENAKPMQIAMYERE 796 Query: 843 AINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQ 902 +IN+ +QG+AAD+IK AM+ ++ L ++ ++I+Q+HDEL+FEV D + K+ Sbjct: 797 SINSILQGSAADVIKLAMLEINKELNEDK---KLILQIHDELIFEVKDDLCENFVKKTRD 853 Query: 903 LMENCTRLDVPLLVEVGSGENWDQ 926 +MEN +L V L +NW Sbjct: 854 IMENIVKLKVKLKTSSSIAKNWGD 877 >UniRef50_B5YDJ0 DNA polymerase I n=3 Tax=Dictyoglomus RepID=B5YDJ0_DICT6 Length = 856 Score = 853 bits (2205), Expect = 0.0, Method: Composition-based stats. Identities = 324/926 (34%), Positives = 515/926 (55%), Gaps = 93/926 (10%) Query: 5 PQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 + ++++DGSS +YR Y+A PPL GE T A+YG + +L + + P V FD Sbjct: 18 SKRKILIIDGSSLIYRVYYALPPLKTKNGELTNALYGFIRILLKAVEDFNPDLVGVAFDR 77 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 TFR +++ YK+ RPPM DDL+AQI + ++ +PLL G EADD+I T+ + Sbjct: 78 PEPTFRHVIYKEYKAKRPPMKDDLKAQIPWIREFLRLNDIPLLEEPGYEADDIIATIVNK 137 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFL 180 + + I +GD D+ QLV+ LI+ TI P+ V +++GV P I + Sbjct: 138 YKDDLK--YILSGDLDLLQLVSDKTFLIHPQKGITEFTIYDPKAVKDRFGVEPYKIPLYK 195 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 L+GD SDNIPGV G+G K A +L+ + + ++ + +E+N Sbjct: 196 VLVGDESDNIPGVNGIGPKKASKILEKISSV-------DEFKSKIKVLDSDLRELIEKNW 248 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 + + +L T+K +++ +L + E+++ E+++ K+YE K + Sbjct: 249 NIIERNLELVTLK-NIDKDLILKPFEIKR--DEKVIDFLKRYELKSILQKL--------- 296 Query: 301 GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDS 360 + + + I D E + ++EK FAF D Sbjct: 297 ---------------------FPDLQEEENIEIKDVEEIN--FNEVEKEGYFAFKCLGDR 333 Query: 361 LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN 420 G+S + + G +I D ++I ++ ++ ++ E K+G Sbjct: 334 A------FEGISLSFKEGEGYFI----SPFDFNNEIRKK-----IENIISSENVKKIGSY 378 Query: 421 LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG 480 ++ D L +++G FD L SY+LN H +D L +L + ++ AG Sbjct: 379 IQRDLHFL---NCKIKGDVFDVSLASYLLNPERQNHSLDILIGEYLNKTSFIPQKYAG-- 433 Query: 481 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI 540 L + + K++G V NIE+PL+PVL + Sbjct: 434 ------------------------YLFPLKSILEERIKNEGLEFVLYNIEIPLIPVLYSM 469 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK 600 E+ G+K+D + L S+E R+ +LE++ +E+AG FNL+S KQL +LFE+ + K Sbjct: 470 EKWGIKVDKEYLKQLSDEFCERIKKLEEEIYELAGTRFNLNSPKQLSEVLFERLKLPSGK 529 Query: 601 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 K G STS VL+ L +P+ + IL+YR L KLKSTY D +P ++NP+TGRVHT ++ Sbjct: 530 KGKTGY-STSSSVLQNLINAHPIVRKILQYRELYKLKSTYVDAIPNLVNPQTGRVHTKFN 588 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRD 720 TATGR+SS++PNLQNIP+++EEGR+IR+AF++ + Y +VS DYSQIELRIMAHLS++ Sbjct: 589 PTGTATGRISSSEPNLQNIPIKSEEGRKIRRAFVSEDGYFLVSLDYSQIELRIMAHLSQE 648 Query: 721 KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 L++AF +G+DIHR TA+E+FG+P E V R AKA+NFG+IYG+S+FGL+ ++I Sbjct: 649 PKLISAFQKGEDIHRRTASEIFGVPEEEVDDLLRSRAKAVNFGIIYGISSFGLSETVSIT 708 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 +EA+K++D YF+ YP V ++++T +A+E+ YV+TL GR+ Y+P+IKS N R A E Sbjct: 709 PEEAEKFIDSYFKHYPRVKLFIDKTIHEAREKLYVKTLFGRKRYIPEIKSINKQVRNAYE 768 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 R AINAP+QGTAADIIK AMI + ++ + + R+++Q+HDEL+ EV +++++ Sbjct: 769 RIAINAPIQGTAADIIKLAMIEIYKEIENKNLKSRILLQIHDELILEVPEEEMEFTPLMA 828 Query: 901 HQLMENCTRLDVPLLVEVGSGENWDQ 926 + ME L VPL+VE+ G+N + Sbjct: 829 KEKMEKVVELSVPLVVEISVGKNLAE 854 >UniRef50_Q5HCC8 DNA polymerase I n=14 Tax=Rickettsiales RepID=Q5HCC8_EHRRW Length = 865 Score = 852 bits (2201), Expect = 0.0, Method: Composition-based stats. Identities = 340/920 (36%), Positives = 498/920 (54%), Gaps = 71/920 (7%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 ++D L+RAY+A P L+ S G P G +YG +NML I + + V FD GK Sbjct: 9 FTIIDAYGLLFRAYYALPHLSTSNGVPIGGVYGFINMLLKYIEVHTANYLVVAFDTGGKN 68 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK- 127 FR +++ YKS+R +P+DL +Q L V A+ + V+G EADDVI TL++ K Sbjct: 69 FRHDIYPQYKSNRIKLPEDLISQFPLLREAVNALNISYEEVAGYEADDVIATLSKNYSKF 128 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSS 187 G V + T DKD+ QL+ NI + + + N + ++V +K+G+ ++DFL+L GD+S Sbjct: 129 DGIKVTVVTSDKDLLQLLEHNIHIFDPVKNKYIVEDDVQDKFGISSSKLLDFLSLTGDTS 188 Query: 188 DNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSY 247 DNIPGVPG+G KTA LL G LD L ++P I R + + ++ A LS Sbjct: 189 DNIPGVPGIGIKTAAKLLNNFGSLDNLLSQPHAIEKNKCR------ESIIKYQDQAILSR 242 Query: 248 QLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAK 307 QL T+ V L+ E+ + P ++L+ KKYE + + A Sbjct: 243 QLLTLCDTVNLDNNIEKYRSRIPDTQKLVKFLKKYELQSLINKIGKIFKTD------AFT 296 Query: 308 PQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISAN 367 + S + + VI Y + E LK +I + A +D Sbjct: 297 VYQKSGYNNENSIKTNVIPYSS-------EELKTFIENCKNEGTIALY-----IDITDNT 344 Query: 368 LVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGI 427 + +S + + G YI H AL+L+KPL + LKV ++K I Sbjct: 345 INSMSLSYKEGTILYINKEH----------ITHALDLIKPLFSLDHILKVMYDVKTLFKI 394 Query: 428 LANYGIELRGIAF-DTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTF 486 + + AF D ++ SY L++ H + ++ R + IT E I Sbjct: 395 IQE---DTNITAFDDILIMSYSLDAGLHDHTLKNIIIRNIDKHDITNENIT--------- 442 Query: 487 NQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVK 546 A L LH + +L ++ ++ IE PL+ VL +E+ G+ Sbjct: 443 ---------------ASTLLSLHTALRRNLFTNQ-LCTIYYRIEKPLINVLHNMEKIGIM 486 Query: 547 IDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGA 606 ID +L S + +++ LE+K ++++GEEFN++S++QL TILF+K GIK KK G Sbjct: 487 IDGSILDKLSSTFSDKISVLEEKIYKLSGEEFNIASSRQLSTILFDKMGIKKGKKLSSGT 546 Query: 607 PSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTA 665 ST EVL ELA + + IL++R KLK+TYTD L I+ T RVHT Y T Sbjct: 547 YSTDAEVLHELAFNGVEIADEILKWRHFTKLKNTYTDVLAKQIDNNTSRVHTFYSMTSTV 606 Query: 666 TGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLT 725 TGRLSS++PNLQNIP+R+EEG IR AFIA Y ++SADYSQIELRIMAH++ + Sbjct: 607 TGRLSSSNPNLQNIPIRSEEGNAIRNAFIAKSGYKLISADYSQIELRIMAHIASVQAFRD 666 Query: 726 AFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQ 785 AF+ +DIH TA ++F + + RR AK+INFG+IYG+S FGLA+QL I R EA Sbjct: 667 AFSLDQDIHLITAQQIFNTQ--NIDKKLRRKAKSINFGIIYGISPFGLAKQLGITRSEAS 724 Query: 786 KYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAIN 845 K+++ YF+ YP + Y+E + A+ GY T+ GR+ ++ DI S+N A R +ERAA+N Sbjct: 725 KHIENYFKSYPEIKSYIEDIKVYARTHGYTRTVFGRKCFIKDINSNNHALRNFSERAAVN 784 Query: 846 APMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLME 905 AP+QGT+ADIIK +MI + L+ MI+QVHDEL+FEV +D VD K I ++ME Sbjct: 785 APLQGTSADIIKMSMIHLFDRLKTG----YMILQVHDELLFEVPEDHVDNTVKLIKEVME 840 Query: 906 NCTRLDVPLLVEVGSGENWD 925 +L VPL V++ G+NW Sbjct: 841 GIVKLSVPLKVDITIGDNWG 860 >UniRef50_Q59156 DNA polymerase I n=6 Tax=Clostridia RepID=DPO1_ANATD Length = 850 Score = 851 bits (2198), Expect = 0.0, Method: Composition-based stats. Identities = 319/927 (34%), Positives = 489/927 (52%), Gaps = 86/927 (9%) Query: 8 PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 L++ DG+S LYRA+ A P LT S PT A+YG +N++ + Q KP + AV FD +G+ Sbjct: 2 KLVIFDGNSILYRAFFALPELTTSNNIPTNAIYGFVNVILKYLEQEKPDYVAVAFDKRGR 61 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 R +E YK++R PMPD+L+ QI + ++ A +P++ G EADDVIG+L + + Sbjct: 62 EARKSEYEEYKANRKPMPDNLQVQIPYVREILYAFNIPIIEFEGYEADDVIGSLVNQFKN 121 Query: 128 AGRPVLISTGDKDMAQLVTPNITL------INTMTNTILGPEEVVNKYGVPPELIIDFLA 181 G ++I TGD+D QL+ N+ + + + E V KYGV + D+ A Sbjct: 122 TGLDIVIITGDRDTLQLLDKNVVVKIVSTKFDKTVEDLYTVENVKEKYGVWANQVPDYKA 181 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 L+GD SDNIPGV G+GEK+AQ LL+ L+ +Y +KI ++ KL Sbjct: 182 LVGDQSDNIPGVKGIGEKSAQKLLEEYSSLEEIYQNLDKI-------KSSIREKL----- 229 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 E + ++ L + D+ +W + + Sbjct: 230 ---------------------EAGKDMAFLSKRLATIVCDLPLNVKLEDLRTKEWNKERL 268 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 + + + S+ + T + + K E +S+ Sbjct: 269 YEILVQLEFKSIIKRLGLSEVVQFEFVQQRTDIPDVEQK----------------ELESI 312 Query: 362 DNISANLVGLSFAIEPGVAA-YIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN 420 I + + L F Y ++ +++ E L+ +K+ + Sbjct: 313 SQIRSKEIPLMFVQGEKCFYLYDQESNTVFITSNKLLIEEILK--------SDTVKIMYD 364 Query: 421 LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG 480 LK L D M+ SY+L+S +++++L +L E K Sbjct: 365 LKNIFHQLNLEDTNNIKNCEDVMIASYVLDSTRSSYELETLFVSYLNTDI----EAVKKD 420 Query: 481 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI 540 K ++ + +L ++ L ++ENIE PL+PVL + Sbjct: 421 KKIVS----------------VVLLKRLWDELL-RLIDLNSCQFLYENIERPLIPVLYEM 463 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK 600 E+ G K+D L +++E+ ++ +LE + ++IAGE FN++S KQL ILFEK + +K Sbjct: 464 EKTGFKVDRDALIQYTKEIENKILKLETQIYQIAGEWFNINSPKQLSYILFEKLKLPVIK 523 Query: 601 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 KT G ST EVLEEL + + +IL+YR K+ +TY L INP +GRVHT++ Sbjct: 524 KTKTGY-STDAEVLEELFDKHEIVPLILDYRMYTKILTTYCQGLLQAINPSSGRVHTTFI 582 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRD 720 Q TATGRL+S+DPNLQNIPV+ +EG+ IR+ F+ +V++ ADYSQIELRI+AH+S D Sbjct: 583 QTGTATGRLASSDPNLQNIPVKYDEGKLIRKVFVPEGGHVLIDADYSQIELRILAHISED 642 Query: 721 KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 + L++AF DIH TAAEVFG+ + VT E R AKA+NFG++YG+S +GLAR + I Sbjct: 643 ERLISAFKNNVDIHSQTAAEVFGVDIADVTPEMRSQAKAVNFGIVYGISDYGLARDIKIS 702 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 RKEA ++++ YFERYP V EY++ T A++ G+V TL R+ Y+ DIKS+N R AE Sbjct: 703 RKEAAEFINKYFERYPKVKEYLDNTVKFARDNGFVLTLFNRKRYIKDIKSTNRNLRGYAE 762 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 R A+N+P+QG+AADI+K AMI V L+ + ++I+QVHDEL+ E ++ D V + + Sbjct: 763 RIAMNSPIQGSAADIMKLAMIKVYQKLKENNLKSKIILQVHDELLIEAPYEEKDIVKEIV 822 Query: 901 HQLMENCTRLDVPLLVEVGSGENWDQA 927 + MEN L VPL+VEV G NW + Sbjct: 823 KREMENAVALKVPLVVEVKEGLNWYET 849 >UniRef50_A9NF42 DNA polymerase I n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NF42_ACHLI Length = 880 Score = 850 bits (2196), Expect = 0.0, Method: Composition-based stats. Identities = 330/929 (35%), Positives = 491/929 (52%), Gaps = 61/929 (6%) Query: 7 NPLILVDGSSYLYRAYHAFPP-----LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 + LVDG+S L+RAY+A L S G T A++ M+ +I +H + Sbjct: 2 KKITLVDGNSILFRAYNATAYPGAKVLQTSTGIYTNAVFAFSGMIDKIIEISN-SHMLIA 60 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 FD T R + ++ YK+ R MP++L +QI +H ++K +G+ +++G EADD+IGTL Sbjct: 61 FDTGEPTHRHKSYDDYKAGRKEMPEELGSQIPLIHELIKYLGIKEYSMAGYEADDIIGTL 120 Query: 122 AREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELII 177 A+ AEKAG V + + D D+ QLVT +IT+ PE + YG EL I Sbjct: 121 AKMAEKAGYKVDVFSSDYDLLQLVTEHITVHMLKKGMRVVETYTPETLKETYGFSHELFI 180 Query: 178 DFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLE 237 DF AL+GD SDNIPGVPGVGE TA+ L+ G L+ + E I G + + Sbjct: 181 DFKALVGDKSDNIPGVPGVGEVTAKKLIAEYGTLENILNNAEHIKG-------KLGENIR 233 Query: 238 QNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWL 297 NKE A S +L+TI TD+ L E +V + E L+ +K+ E K+ Sbjct: 234 TNKEQAVFSKELSTILTDMPLPFDLEDTKVGEVDEESLINFYKRLELKQLV------ISY 287 Query: 298 QAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTE 357 K + AA ETS Y I E LK+ + + A E Sbjct: 288 NKKNPEVAATTAETSEF--------------QYKAIDSENALKSLLNQ-----DLAIYFE 328 Query: 358 TDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKV 417 + A L G+ + G Y + +L++ K LE K K Sbjct: 329 FSDFNYHKAELWGVGLSN--GKINYFVDSETFLNS----------ASFKAYLESSKYKKY 376 Query: 418 GQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIA 477 + K + L G E + +D +L +Y++ S G+ D +A+++ EE+ Sbjct: 377 TYHYKGTKVFLKKLGTEFNHVTYDLLLAAYLIQSSIGKQDFTFIAQQFQITDIQYDEEVY 436 Query: 478 GKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVL 537 GKG + I + G A + + + + D+ + L++ ++E+PL VL Sbjct: 437 GKGAKK-ALPLIPSDYEGHIAKKAYIIHKLMQQTL--DVLTERNQLSLLNDVELPLSDVL 493 Query: 538 SRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIK 597 + +E G+ +D K L N +++++LR+ +L + +AG +FN+ S KQL +LF+ G+ Sbjct: 494 ADMEYQGLTVDLKELENQTKDMSLRIDKLRTEILLLAGVDFNVDSPKQLGDVLFDTLGLP 553 Query: 598 PLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHT 657 KKT G ST EVL L +P+ +I+EYR L KL STY + + + RVHT Sbjct: 554 NGKKTKTGY-STGIEVLNNLIDHHPIINLIIEYRQLTKLYSTYLIGIKESVF-EDNRVHT 611 Query: 658 SYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHL 717 Y+QA+T TGRLSS +PNLQNIP+R EEGR+IR+ FI D V ADYSQIELR++A + Sbjct: 612 IYNQALTLTGRLSSLEPNLQNIPIRTEEGRQIRKLFIPEPDSYFVGADYSQIELRVLAAM 671 Query: 718 SRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQL 777 + K L AF E +DIH TA +VF ++TV SEQRR AKA+NFG+IYG+ + L+ + Sbjct: 672 ADVKNLKQAFEEDQDIHTVTAQKVFH--VDTVDSEQRRRAKAVNFGIIYGIGPWSLSEDI 729 Query: 778 NIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRA 837 + KEA+ ++ Y E YP + +YM AK GYVETL RR Y+P++ S R Sbjct: 730 GVTVKEAENFISRYLEVYPEIKDYMTNIVEFAKTHGYVETLLNRRRYIPELSSKVFNLRE 789 Query: 838 AAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVA 897 +R ++NAP+QGTAADIIK AMI + +L+ + + ++I+QVHDEL+ EV K+++D + Sbjct: 790 FGKRTSLNAPIQGTAADIIKLAMIDLHNYLKDNKKKSKLILQVHDELIVEVVKEELDEMK 849 Query: 898 KQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 + I +ME L V L G NW + Sbjct: 850 EVIPNIMEKAFNLGVRLKTSCDVGNNWYE 878 >UniRef50_B6G9J6 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6G9J6_9ACTN Length = 932 Score = 849 bits (2195), Expect = 0.0, Method: Composition-based stats. Identities = 349/945 (36%), Positives = 513/945 (54%), Gaps = 53/945 (5%) Query: 9 LILVDGSSYLYRAYHAFPPLTN-SAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 + ++DG+S ++RA+HA PP N G PT A++G LNM ++ ++ P FD Sbjct: 14 IAVIDGNSLMHRAFHAVPPTMNAPDGSPTNAVFGFLNMFLKMVDEFSPDGVVCAFDKGHP 73 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 R E+ YK+ RPPM +LRAQ + ++ ++ +P++ + G E DD++GTLAR E Sbjct: 74 KVRMEMLPQYKAQRPPMDPNLRAQFPMIKELLASLSVPVVELEGWEGDDILGTLARRGEA 133 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKY-GVPPELIIDFLAL 182 AG + + TGD+DM QLVT ++ +++T I+ PE V + Y G+ PEL+ DF L Sbjct: 134 AGCDMYLVTGDRDMYQLVTDHVHVVSTRKGLSDIAIMTPESVDDLYHGITPELVPDFYGL 193 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 GDSSDNIPGVPG+G K A AL+ G LD + A +++ G M L + + Sbjct: 194 KGDSSDNIPGVPGIGPKKASALIVQYGSLDEVIAHADEVKG-------KMGESLRAHIDD 246 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYE-------FKRWTADVEAGK 295 A +S ++ATI TD +E +++ A + F D A + Sbjct: 247 ALVSRKIATIMTDAPVECDLDEVSFPAYDAASVSAALGALGIMAMQNRFLALLGDAAASQ 306 Query: 296 WLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFD 355 +K P + E + S + + +E ++A A D Sbjct: 307 AAVSKLELPEVLRVSLDASRAFDEAESNRESAE--MNACFDELMRALEAGEWLGVAMEDD 364 Query: 356 TETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKAL 415 E D+L ++ L ++ P+ + A D + + LL K Sbjct: 365 KEADALFGMTRRL--WVATDRALLSFEEPIGPCGVFATDIDCSHGVIPGVLGLLFA-KGS 421 Query: 416 KVGQNLKYDRGILA---NYGIEL-------RGIAFDTMLESYILNSVAGRHDMDSLAERW 465 V ++K +L+ + EL FDT++ +Y+L+SV LAE + Sbjct: 422 VVSSDVKALLHVLSPVDSSEPELMDPLDADPARLFDTVVAAYLLDSVRSDFADAHLAETY 481 Query: 466 LKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNV 525 L A G++ + + + A L L + +G ++ Sbjct: 482 LHAALP-----AAAGEDGAPADAPSAAARSAWLARILREPLAAAL-------EAQGAEDI 529 Query: 526 FENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAG-EEFNLSSTK 584 F IEMPLV VL+ +ER G+ +DP L SEEL+ ++AEL + E+AG EEFNLSS Sbjct: 530 FTKIEMPLVRVLASMERAGMYVDPARLAAQSEELSGQIAELSDRIRELAGGEEFNLSSPM 589 Query: 585 QLQTILFEKQGIK--PLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTD 642 QL +LF+K G+ LKKT G ST+ +VLE+LA DY + ++ILEYR K+KSTY D Sbjct: 590 QLSRVLFDKLGLPTAGLKKTQRGYYSTNAKVLEDLAKDYEIVRLILEYRERTKIKSTYLD 649 Query: 643 KLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIV 702 L + GRVHT+Y+Q +TATGRLSS++PNLQNIP R+E G +++AF E V V Sbjct: 650 TL-GALRETDGRVHTTYNQTITATGRLSSSNPNLQNIPTRSELGHAVKKAFSVEEGSVFV 708 Query: 703 SADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINF 762 + DYSQIELR++AHLS D+ L+ AF EG+D H TAA VFG+P+E VT + R AKA+NF Sbjct: 709 AIDYSQIELRLLAHLSGDEHLVGAFNEGEDFHAETAARVFGVPVEEVTPQLRSRAKAVNF 768 Query: 763 GLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRR 822 G++YG A+GL++ L+IP EA++ +D YF YPGV Y++ T A AK+ GY ET+ GRR Sbjct: 769 GIVYGQQAYGLSQALDIPMAEAREMIDAYFRAYPGVRTYLDETVAFAKQTGYAETMYGRR 828 Query: 823 LYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHD 882 +P+++ A+R ER A+N PMQG+AADIIK AM+ V L+ E +MI+QVHD Sbjct: 829 RPIPELRVP--AQRMFGERTAMNHPMQGSAADIIKIAMVRVAERLRTEGFAAKMILQVHD 886 Query: 883 ELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 EL FE +VDA+ + + ME +L VPL+ + GE W +A Sbjct: 887 ELDFECPVGEVDALVAMVREEMEGVAQLRVPLIADASVGETWAEA 931 >UniRef50_C4LIB4 DNA polymerase I n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LIB4_CORK4 Length = 925 Score = 849 bits (2195), Expect = 0.0, Method: Composition-based stats. Identities = 334/955 (34%), Positives = 504/955 (52%), Gaps = 67/955 (7%) Query: 2 VQIPQNPLILVDGSSYLYRAYHAFPP--LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAA 59 V+ + L+L+DG S +RA++A P T+S+G+ T A+YG ++ML +L+ Q KPTH+A Sbjct: 7 VEDTKKKLLLLDGHSLAFRAFYALPADKFTDSSGQHTNAVYGFISMLVTLLEQEKPTHSA 66 Query: 60 VVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIG 119 FD G TFR E F YK+ RP P + + QIE + ++ G+ + EADDVI Sbjct: 67 AAFDLAGPTFRSEKFADYKAQRPETPPEFKGQIELIRQALETFGITTVDYKRYEADDVIA 126 Query: 120 TLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPEL 175 TLA + + G I TGD+D QLVT ++T++ T+ PE V KYGV P Sbjct: 127 TLATQGHEQGFDTYICTGDRDSLQLVTDDVTVLYTLRGVSNLARFTPEAVEEKYGVTPTQ 186 Query: 176 IIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAK 235 D AL GD+SDN+PGVPGVG KTAQ + G L L + I G + Sbjct: 187 YPDLAALRGDTSDNMPGVPGVGPKTAQKWINKYGSLSNLIDNIDDIGG-------KVGDA 239 Query: 236 LEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGK 295 L ++ + + +L + D+ ++ + E E++ A ++ F +F + Sbjct: 240 LRRDIDTVIQARELTEMVRDLPIKCSPEDCEIRPSARNDVNDFFDDVQFGMNLRERVFSV 299 Query: 296 WLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFD 355 G+ A +E + V + T + A +KL +P Sbjct: 300 IPTQGGSSDAGNHRERVSYERVGLQKGKVRHWLEEATDHTPAGIAALGSKLPSSPNMKAL 359 Query: 356 TETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKAL 415 T + A I ++ D D + K L+D Sbjct: 360 AIT-----------------QGKQTAIINMSRTTDDDRDAL---------KEWLQDPDHP 393 Query: 416 KVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKT----- 470 V + K +L++ G+ I DT L SY+++ G D++S+ R L Sbjct: 394 IVVHDGKGLLHMLSSEGLTATNIEHDTRLASYLIHPDFGSFDLESVVRRRLGRDLYDSDV 453 Query: 471 ITFEEIAGKGKN--------------QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDL 516 +++EE G+ + I+ E + A+ A+ L+L ++ L Sbjct: 454 VSWEEEHRSGRQMSLDVGDLSSDGDDDRSVAGISWPEWAK-LADHAEAPLELAEELAKKL 512 Query: 517 QKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLA-ELEKKAHEIAG 575 K G +++EN+E+PLVP+L +ER G+K++ + + + +LA E+E+ + Sbjct: 513 DKA-GLYSIYENLEIPLVPILFGMERAGIKVNRERMTALRDSTAEKLAKEVEEARALVDM 571 Query: 576 EEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLP--KVILEYRGL 633 + NL S KQLQ +LF+K + KKT G ST+ + +E LA +P P +L +R Sbjct: 572 PKLNLGSPKQLQEVLFDKLELSKTKKTKTGY-STAAKAIERLAEKHPHPFLDHLLAHREY 630 Query: 634 AKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAF 693 K ST D L I GR+HT+++Q TATGRLSSTDPNLQNIPVR EEGR+IR AF Sbjct: 631 QKRVSTL-DGLIKAI-ASDGRIHTTFNQTATATGRLSSTDPNLQNIPVRTEEGRQIRAAF 688 Query: 694 IAPEDYV-IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSE 752 + E Y +++ADYSQIE+R+MAH S+D+GL+ A+ G+D+H ++VF +P+ VT E Sbjct: 689 VPGEGYEALLTADYSQIEMRVMAHFSQDRGLIEAYRSGEDLHNFVGSQVFDVPVNEVTPE 748 Query: 753 QRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQ 812 RR KA+++GL+YG+S +GL++QL+I +EA+K M YFER+ GV Y+ +A++ Sbjct: 749 LRRRVKALSYGLVYGLSEYGLSQQLDISVREAKKIMVKYFERFGGVRRYLNEVVDRARKD 808 Query: 813 GYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQP 872 Y T+ GRR YL D+ S N R AERAA+NAP+QGTAADIIK AMI VDA L+ E+ Sbjct: 809 EYTSTMLGRRRYLSDLASLNRQARENAERAALNAPIQGTAADIIKVAMIRVDAALKKEKL 868 Query: 873 RVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 R+++QVHDEL EV +++ V I + M+ L VPL V + G +W++A Sbjct: 869 ASRVLLQVHDELDVEVANGELEQVRGIIQREMDEAIELAVPLEVGMAVGADWNEA 923 >UniRef50_B2A646 DNA polymerase I n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A646_NATTJ Length = 930 Score = 849 bits (2194), Expect = 0.0, Method: Composition-based stats. Identities = 352/947 (37%), Positives = 511/947 (53%), Gaps = 57/947 (6%) Query: 5 PQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 + +++DG+S L RA++A P L G T A+YG ML L+ P + AVVFD Sbjct: 8 ANDKFVVIDGNSLLNRAFYALPLLQTKQGFFTNAIYGFTTMLLKLVQDESPNYLAVVFDT 67 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 K KTFR F YK HR PD++R Q+ L +++AM + G EADD+IG + Sbjct: 68 KAKTFRHHKFPEYKGHRDKAPDEMRPQMPMLKELLEAMNINYFEKDGYEADDLIGAFTKI 127 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI----LGPEEVVNKYGVPPELIIDFL 180 A++ + ++ TGDKD+ QL+ T++ T E+V ++GV + +ID Sbjct: 128 AKQEDKETMVVTGDKDLLQLLDDKTTILLTKKGITQMESYDGEKVKEEFGVNVDKLIDLK 187 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 AL GD SDN+PGVPGVG+KTA LL G L+ LY + + G + +KL NK Sbjct: 188 ALTGDKSDNVPGVPGVGKKTALKLLNNYGDLEKLYKSLDGVGG-------KLQSKLADNK 240 Query: 241 EVAYLSYQLATIKTDVEL--ELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 + A+LS +L TI + L L QL + A+ + L +++E + A Q Sbjct: 241 DKAFLSKELVTIDCEESLIENLDWNQLSKFEIASPKARELLQEWEMNSILERLPASDEEQ 300 Query: 299 AKGAKPAAKPQETS-------VADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPV 351 K P + + +S E P + + + I D A L K Sbjct: 301 KKDQSPVNEGKTSSFNWDNFYYISEFPHENSDNLESELEKFIQDGNHKMALYRHLPKKLS 360 Query: 352 FAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPL-LE 410 A D+ GL +I + Y+P + I+ + K E Sbjct: 361 TAKQ-----KDSYPEPEGGLVVSIND-LIFYVPEKLLSQVLAETIAPKLIKGNDKGTETE 414 Query: 411 DEKALKVG-QNLKYDRGILAN------YGIELRGIAF-DTMLESYILNSVAGRHDMDSLA 462 D LK+ N+K + N Y ++ F DT L +Y+L H ++ + Sbjct: 415 DAPKLKIASYNIKRIWHLFKNNTELDLYDLDTNKFLFYDTELMAYLLEPTEAPHSIEDMM 474 Query: 463 ERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGP 522 R+ F+ + + E + L L + D+ + + Sbjct: 475 NRYYG-----------------QFDLTPYGQDWQAVCERGAILLDLISPL-EDILQERNQ 516 Query: 523 LNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSS 582 +++NIE+PL +L+R+E G+K+D +VL + RL+E+ K EIAGEEFNL+S Sbjct: 517 WQLYKNIELPLAFILARMEFRGIKVDARVLTEMEANIDHRLSEISTKIFEIAGEEFNLNS 576 Query: 583 TKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTD 642 KQL ILFEK + +KKT G ST + LE L+ DY + K++L+YR L KLK+TY Sbjct: 577 PKQLGYILFEKLQLPVVKKTKTGY-STDAKTLETLSHDYEICKLLLDYRQLHKLKTTYLV 635 Query: 643 KLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE-DYVI 701 L +I+ TG++HT+Y+Q +TATGRLSSTDPNLQNIP++ EEGR+IR+ F+ D + Sbjct: 636 GLKDLISKTTGKIHTTYNQTITATGRLSSTDPNLQNIPIKLEEGRKIRKGFVIQNSDQLF 695 Query: 702 VSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAIN 761 ++ADYSQIELRI+AH+S D L+ AF E +DIH TAA+VF + VT E R AKA+N Sbjct: 696 LAADYSQIELRILAHVSEDTNLIQAFQEQQDIHTQTAAQVFEVESTQVTREMRSHAKAVN 755 Query: 762 FGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGR 821 FG++YG+S +GL+RQL I RK+A+ Y+D Y R+ GV EYM++ QAK GYVETL R Sbjct: 756 FGIVYGISDYGLSRQLGISRKQAKTYIDNYLTRFSGVKEYMDQIVNQAKMNGYVETLYNR 815 Query: 822 RLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWL--QAEQPRVRMIMQ 879 R LPDI N R+AAER AIN P+QGTAADIIK AM+ V+ L Q + +++Q Sbjct: 816 RRNLPDISHRNFNIRSAAERTAINTPIQGTAADIIKDAMVKVEKELEKQDLLDKAALLLQ 875 Query: 880 VHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 VHDEL+ E++K+ + VA ++ ++MEN L VPL V++ +G NW Sbjct: 876 VHDELILEINKEVLSDVATKVKEIMENIIELKVPLTVDLKTGPNWYD 922 >UniRef50_P46835 DNA polymerase I n=51 Tax=Actinobacteridae RepID=DPO1_MYCLE Length = 911 Score = 849 bits (2193), Expect = 0.0, Method: Composition-based stats. Identities = 321/941 (34%), Positives = 490/941 (52%), Gaps = 59/941 (6%) Query: 3 QIPQNPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 + L+L+DG+S +RA++A P G T A+YG ML +L+ + PTH A Sbjct: 12 DHTKPMLMLLDGNSLAFRAFYALPTENFKTRGGLTTNAVYGFTAMLINLLREEAPTHIAA 71 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 FD KTFR E + YK++R +P + QI+ ++ A+G+ + A +G EADD+I T Sbjct: 72 AFDVSRKTFRSECYAGYKANRSSIPAEFHGQIDITKEVLGALGITVFAEAGFEADDLIAT 131 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPELI 176 LA +AE G VL+ TGD+D QLV+ ++T++ PE V+ KYGV P Sbjct: 132 LATQAENEGYRVLVVTGDRDALQLVSNDVTVLYPRKGVSELTRFTPEAVIEKYGVTPAQY 191 Query: 177 IDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKL 236 D AL GD SDN+PG+PGVGEKTA + G L L E + G + L Sbjct: 192 PDLAALRGDPSDNLPGIPGVGEKTAAKWIVDYGSLQGLVDNVESVRG-------KVGEAL 244 Query: 237 EQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKW 296 + + +L + DV L T + L +Q + + LF EF+ + Sbjct: 245 RTHLASVVRNRELTELVKDVPLVQTSDTLRLQPWDRDRIHRLFDNLEFRVLRDRL----- 299 Query: 297 LQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDT 356 ++A V +D +L+ T+ W+AK + Sbjct: 300 -------------FEALAAAGERVPEVDEGFDVRGGLLESGTVGRWLAKHADDGRRSGLA 346 Query: 357 ETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALK 416 + + L+ A G YI A D D ++ L D K Sbjct: 347 IVGTHLPHGGDATALAVAAADGNGGYIDTAMLTPDDDDALA---------AWLADPDNPK 397 Query: 417 VGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEI 476 K LA G L GI DT L +Y++ +D L+ R+L+ E+ Sbjct: 398 ALHEAKLAMHDLAGRGWTLGGITSDTALAAYLVRPGQRSFTLDDLSLRYLRR------EL 451 Query: 477 AGKGKNQLTFNQIA-LEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLN---VFENIEMP 532 + Q F+ + ++E + A + + + + + L ++ + +E+P Sbjct: 452 RAETPEQEQFSLLDNVDEVDKQAIQTLILRARAVVDLAAALDAELDLIDSTSLLGEMELP 511 Query: 533 LVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFE 592 + VL+ +E+ G+ D ++L + ++ + + A+ + G++ NLSS KQLQ +LFE Sbjct: 512 VQQVLADMEKAGIAADLRLLTELQSQFGDQIRDAAEAAYAVIGKQINLSSPKQLQVVLFE 571 Query: 593 KQGIKPLKKTPGGAPSTSEEVLEEL--ALDYPLPKVILEYRGLAKLKSTYTDKLPLMINP 650 + G+ K+T G +T + L+ L ++P + +L +R + +LK T D L + Sbjct: 572 ELGMPKTKRTKTGY-TTDADALQSLFCKTEHPFLQHLLTHRDVTRLKVT-VDGLLNAV-A 628 Query: 651 KTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY----VIVSADY 706 GR+HT+++Q + TGRLSST+PNLQNIP+R GR+IR AF+ + +++ADY Sbjct: 629 ADGRIHTTFNQTIATTGRLSSTEPNLQNIPIRTNAGRQIRDAFVVGSENNGYTELMTADY 688 Query: 707 SQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIY 766 SQIE+RIMAHLSRD+GL+ AF G+D+H A+ FG+P+E +T E RR KA+++GL Y Sbjct: 689 SQIEMRIMAHLSRDEGLIEAFHTGEDLHSFVASRAFGIPIEDITPELRRRVKAMSYGLAY 748 Query: 767 GMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLP 826 G+SA+GLA QL I +EA+ M+ YF R+ GV +Y+ QA++ GY T+ GRR YLP Sbjct: 749 GLSAYGLATQLKISTEEAKLQMEQYFARFGGVRDYLMDVVEQARKDGYTSTVLGRRRYLP 808 Query: 827 DIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVF 886 ++ SSN R AAERAA+NAP+QG+AADIIK AMIAVD L+ + RM++QVHDEL+F Sbjct: 809 ELDSSNRQIREAAERAALNAPIQGSAADIIKVAMIAVDKSLKQAKLASRMLLQVHDELLF 868 Query: 887 EVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 EV + + + + + M + LDVPL V VG G +W A Sbjct: 869 EVAIGEREQIEAMVREQMGSAYPLDVPLEVSVGFGRSWGAA 909 >UniRef50_B0MR22 DNA polymerase I n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MR22_9FIRM Length = 829 Score = 847 bits (2189), Expect = 0.0, Method: Composition-based stats. Identities = 311/923 (33%), Positives = 471/923 (51%), Gaps = 99/923 (10%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 +++DG+S L RA++ LTNS G T A+ G +N L L P AV FD K T Sbjct: 3 FLIIDGNSILNRAFYGIRVLTNSRGVATNAVTGFMNTLLMLEKDVNPDMIAVAFDLKALT 62 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR ++++ YK++R MP+DL Q+ + ++ AMG+ ++ G EADD+IGT++ Sbjct: 63 FRHKMYDGYKANRKGMPEDLAQQLPYMKKIITAMGITIIEKEGFEADDIIGTVSAACADK 122 Query: 129 GRPVLISTGDKDMAQLVTPNITL--INTMTNTILGPEEVVNKYGVPPELIIDFLALMGDS 186 P +STGD+D QLV +T+ T + P+ ++ +YGV P+ +I+ ALMGDS Sbjct: 123 KIPCTVSTGDRDSFQLVNDYVTVRLAKTKGDIYYTPDVIMEEYGVTPKQMIEVKALMGDS 182 Query: 187 SDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLS 246 SDNIPGVPG+GEKTA +L++ +D +Y S K + KLE KE Y+S Sbjct: 183 SDNIPGVPGIGEKTALSLIKEFASVDGVYENI-----GSTLITKGVRTKLENGKESCYMS 237 Query: 247 YQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAA 306 QLA I ++ ++ EL L + E K LQ P + Sbjct: 238 RQLAEICLTAPIDTELSHYVPKERDDAELARLLSELEM---------YKMLQKLKLHPTS 288 Query: 307 KPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISA 366 P + E L+ AK + + A D + A Sbjct: 289 APTGSK------------------------EALEESAAK-QIPAMPAGDIVLTQEGGVYA 323 Query: 367 NLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRG 426 VG AP ++S D + K ++K Sbjct: 324 GTVG---------------------APVKLSDVELKAY-----ADSDSTKYTFDIKETLT 357 Query: 427 ILANYGIE-LRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLT 485 + G E L+ FDT L +Y+ + + + + L ++ + + +E +T Sbjct: 358 V---TGCERLKNNRFDTTLAAYLADPDSNDYSLSRLCAQYGVPEGNSIQE------KSIT 408 Query: 486 FNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGV 545 + + + G V +IE+PL VL +ER GV Sbjct: 409 VAALNDILNCKIS--------------------ETGSAAVLTDIEIPLATVLVAMEREGV 448 Query: 546 KIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGG 605 ID + +E+ + ++ ++ +E AG EFN+ S KQL ++LFEK + KKT G Sbjct: 449 SIDADGIKAFGKEVCEKAEKISREIYEYAGYEFNIGSPKQLGSVLFEKLALPSAKKTKTG 508 Query: 606 APSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTA 665 ST+ +VLE L +P+ +I EYR L KL++TY L ++ + GR+H+++ Q T Sbjct: 509 Y-STNADVLESLMDKHPIVPLITEYRALTKLQNTYVTGLLKVV-GEDGRIHSTFKQTETR 566 Query: 666 TGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLT 725 TGR+SS +PN+QNIPVR GR +R+ F A + ++V ADYSQIELR++AH+S D+ + Sbjct: 567 TGRISSAEPNIQNIPVRTPLGREMRRFFTAKDGCLLVDADYSQIELRVLAHISGDEIMKK 626 Query: 726 AFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQ 785 AF +G DIH TA++VF P+E VT + R AKA+NFG++YG+ AF L++ + + +A Sbjct: 627 AFLDGVDIHTVTASQVFNQPIEWVTPDLRSKAKAVNFGIVYGIGAFSLSKDIGVSVPKAS 686 Query: 786 KYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAIN 845 +Y+ Y +Y G+ YME+T A+AK GYVET+ GRR Y+ ++ + N +A ER A N Sbjct: 687 EYIRSYLSKYSGIAHYMEQTVAKAKRDGYVETMFGRRRYIKELAAKNKNLQAFGERVAKN 746 Query: 846 APMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLME 905 P+QGTAADIIK AMI V L+ R+I+QVHDEL+ E +D + VA + + ME Sbjct: 747 TPIQGTAADIIKIAMIKVYNRLKESGLDARLILQVHDELIVEAKEDCAEKVALLLKEEME 806 Query: 906 NCTRLDVPLLVEVGSGENWDQAH 928 N +L VP+ V+V G+ W H Sbjct: 807 NAVKLTVPMTVDVNIGKTWYDTH 829 >UniRef50_UPI0001976BF8 DNA polymerase I n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=UPI0001976BF8 Length = 943 Score = 845 bits (2184), Expect = 0.0, Method: Composition-based stats. Identities = 320/950 (33%), Positives = 479/950 (50%), Gaps = 44/950 (4%) Query: 5 PQNPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 + L++VDG S +RA+ A P + AG+ T A++G ML ++ KP H AV F Sbjct: 12 TRGTLLVVDGHSLAFRAFFALPAENFSTQAGQATNAVWGFATMLSQVLDSEKPDHLAVAF 71 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 D KG TFR+E+ YK R P+DL Q+ + M+ A+G+ + G E DD+I TLA Sbjct: 72 DMKGGTFRNEMLPQYKGTREAAPEDLLTQLPLIQKMLTALGVTYVEKQGYEGDDIIATLA 131 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIID 178 E++G L+ +GD+D QL+ +T++ + + P+ V +KY V P D Sbjct: 132 AMGERSGYDTLVLSGDRDAFQLIDERVTVLYPGHHFKDLKHMTPQAVEDKYHVGPAQYPD 191 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 AL G+++DNIPGVPGVG+ A + GGL+ + ++I G L + Sbjct: 192 LAALRGETADNIPGVPGVGDGFAAKWINQYGGLEGIIEHADEIGG-------KKGESLRE 244 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 N E L+ ++ ++ DV+L + E L + A+ L LF EF T K L+ Sbjct: 245 NIEQVKLNRKVNALRRDVDLGIGIEDLTFGEVDADALSELFTSLEFGPRTR----SKVLK 300 Query: 299 AKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTET 358 + A A AD+ E T+ + VTI DE L AWI D Sbjct: 301 SFNAGKRAGDAADKHADD--ENTSDDLRIPEAVTIADEAALAAWIDSARDGLGSPADNSD 358 Query: 359 DSLDN--ISANLVGLSFAIE---------PGVAAYIPVAHDYLDAPDQISRERALELLKP 407 D N A+++ + A+ PG + + + L+ Sbjct: 359 DEPRNRAHCADVMASTCALYAEGSSKPGNPGCSVLMLEVGGKAAVLEAGVIAGVRPALQR 418 Query: 408 LLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLK 467 L+ V K ILA+ G++L FDT L Y++ ++ A +L+ Sbjct: 419 FLDGHADRIVVHGYKEQSHILASLGLDLAEPWFDTKLAGYLVQPDYHADSLEQAASHFLQ 478 Query: 468 HKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFE 527 + +++A +G+ L+ + ++ L M + + + Sbjct: 479 LQLDNADDVA-QGQLDLSGDVDPADQRKDLLHMAMVRALAD---MLAAKIDEREQFRLLQ 534 Query: 528 NIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQ 587 +IE+P+ VL +E+ G +D L + + + ++ A + AG NL S KQLQ Sbjct: 535 SIELPVSHVLFGMEQVGASVDFMRLTEMRDRFAIDARDAQETAWQFAGSRVNLQSPKQLQ 594 Query: 588 TILFEKQGIKPLKKTPGGAPSTSEEVLEELALD-------YPLPKVILEYRGLAKLKSTY 640 +LF+ G+KP KKT G+ +T+ L++LA+ +L +R KLK Sbjct: 595 AVLFDDMGLKPTKKTKSGSYTTNASALQDLAVRSVGNERANGFLTALLRHRETNKLKQI- 653 Query: 641 TDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYV 700 L +NP GR+HT++ Q V ATGRLSS DPNLQNIP RN EGR IR AF+ E Y Sbjct: 654 VQSLIDAVNPDDGRIHTTFEQTVAATGRLSSVDPNLQNIPNRNAEGREIRSAFVPGEGYE 713 Query: 701 -IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKA 759 ++S+DYSQ+ELRIMA LS D L+ AF G D H+ A+ V+G+P++ +T +QR KA Sbjct: 714 SLLSSDYSQVELRIMADLSGDDALIEAFRSGADFHKYVASLVYGIPVDDITPDQRTHVKA 773 Query: 760 INFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLD 819 +++GL YG+S +GLA+QL I EA + YF + V EY+E A A+E+GY ET+ Sbjct: 774 MSYGLAYGLSTYGLAQQLKISPGEADRLKSQYFATFGKVHEYLESLVAGAREKGYTETMF 833 Query: 820 GRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQ 879 GRR Y P ++S N R AAER A+NAP+QG+AADI+K AMI L + R R+I+Q Sbjct: 834 GRRRYFPGLQSPNRNIRDAAERGALNAPIQGSAADIMKIAMIHASDALAKAKVRSRIILQ 893 Query: 880 VHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW-DQAH 928 +HDELV E+ + + V + ME+ L VPL V G G +W AH Sbjct: 894 IHDELVVEIAPGEAEQVTGLVRDAMEHAVDLAVPLDVSTGIGSDWQLAAH 943 >UniRef50_Q118S8 DNA polymerase I n=4 Tax=Cyanobacteria RepID=Q118S8_TRIEI Length = 1045 Score = 843 bits (2178), Expect = 0.0, Method: Composition-based stats. Identities = 341/1052 (32%), Positives = 516/1052 (49%), Gaps = 150/1052 (14%) Query: 10 ILVDGSSYLYRAYHAFPP-----LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 + VDG S +R+Y+AF L S G PT +G L L +I KP + A+ FD Sbjct: 9 LFVDGHSLAFRSYYAFAKSRNGGLKTSTGIPTSICFGFLKSLLEVINTQKPEYLAIAFDL 68 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 TFR E ++YK+ RP P+DL + L ++KA L ++ G EADD++GTLA++ Sbjct: 69 GKPTFRHEADKNYKADRPEPPEDLIIDLGNLQDLLKAFNLTVITAPGYEADDILGTLAKK 128 Query: 125 AEKAGRPVLISTGDKDMAQLVT--PNITLINTMTNT-----ILGPEEVVNKYGVPPELII 177 A G V I +GD+D+ QL+ I++++ PEEV K G+ P ++ Sbjct: 129 ASATGFKVKILSGDQDLFQLIDAEKGISVLHLPGGKGSIPQEFFPEEVKEKLGILPTQVV 188 Query: 178 DFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLE 237 D+ AL GD SDNIPGV G+G+KTA LL G L +YA E+I G + KL Sbjct: 189 DYKALCGDKSDNIPGVRGIGQKTAVKLLNEYGCLSEIYASLEQIKGAN-------KKKLV 241 Query: 238 QNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADV------ 291 K A S +A I+ +V L + E + ++ E+ + +K E + + + Sbjct: 242 LGKTEAEHSQFMAKIEVNVPLNIDIEDCKFKKIYPSEIEPILQKLELQHFINKIPHLEQQ 301 Query: 292 ------------EAGKWLQAKGAKPAAKPQETSVADEAPEVTATVI-----SYDNYVTIL 334 E+G Q + A + S + Sbjct: 302 FNSLVEVKSGLDESGIQQQEISQNTLVEIGSDDWFFSAEDTKVAKQQTSTKSKIKPQIVD 361 Query: 335 DEETLKAWIAKLEKAP----VFAFDTETDSLDNISANLVGLSFAIEPGVA--AYIPVAHD 388 E L + L++ A+DTET SL+ A LVG+ + AYIP H Sbjct: 362 TIEKLNKLVNILKEQKNPHIPVAWDTETTSLEPRDAELVGIGCCWGKNMEDVAYIPTGHK 421 Query: 389 YLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYI 448 D+++ LE LKP+LE + KV QN K+DR + GI+L G+ FDTML SY+ Sbjct: 422 TDKNLDKVT---VLESLKPVLESSEYPKVFQNSKFDRLVFRCQGIKLTGVFFDTMLASYV 478 Query: 449 LNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQL 508 LN A +H ++ + R+L++ I + T + + + Y VT QL Sbjct: 479 LNPEA-KHSLEEIYIRYLRNVGINLQSYQDVVSKNQTIADLDILKVADYCGTQVWVTFQL 537 Query: 509 HLKMWPDLQK-------HKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTL 561 K+ +L+K K + ++E PL PVL+ +E G++ID + L S +L Sbjct: 538 VEKLRTELEKADKNKSTEKSLYRLLVDVEQPLEPVLAEMEFQGIRIDIEYLKKFSVQLKE 597 Query: 562 RLAELEKKAH--------------EIAGEEFNLSSTKQ---------------------- 585 L E+EK+A EI +FN S +Q Sbjct: 598 DLEEIEKRAFKTVDSQVLQKYLQTEIHEIDFNSFSNQQELKKAISSPILKAYITKLLKEH 657 Query: 586 ---------------------------LQTILFE--KQGIKPLKKTPGGAPSTSEEVLEE 616 L +LF Q K ++ G ST LE+ Sbjct: 658 RQNLENIESQINQVETRDLLNLNSPSQLSELLFRILNQNHKKSRRIKTGY-STDVVALEK 716 Query: 617 LALD---YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTD 673 L + +P+ IL +R L KL STY + +P ++ T RVHT+++Q T TGRLSS++ Sbjct: 717 LQTEPEHHPIIDEILNHRTLYKLFSTYVEAIPRLVRSDTQRVHTNFNQTQTDTGRLSSSE 776 Query: 674 PNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDI 733 PNLQNIP+ + R+IRQAF+ +D+++V+ADYSQIELRI+AHLS++ L+ A+ +D+ Sbjct: 777 PNLQNIPIGTKFSRQIRQAFLPKKDWLLVAADYSQIELRILAHLSQEPVLIEAYKNNQDV 836 Query: 734 HRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFE 793 H TA +F E ++SE+RR K INFG+IYGM A LAR + I KE++++++ Y + Sbjct: 837 HTVTAKLLF--EKEEISSEERRVGKTINFGVIYGMGAQKLARSVKITVKESKQFLEKYKQ 894 Query: 794 RYPGVLEYMERTRAQAKEQGYVETLDGRRLY-------LPDIKSSN-----------GAR 835 +Y V Y+E+ + QA +GYVET+ GRR Y + D+K Sbjct: 895 QYSLVFAYLEKLKKQAIAKGYVETILGRRRYFELESKTIRDLKDKEPEEINLQELKFSQN 954 Query: 836 RAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDA 895 A R+A N+P+QG++ADIIK AMI ++ L + ++++QVHDELVFEV +++ Sbjct: 955 DAQILRSAANSPIQGSSADIIKIAMIRLNKILT--NYQTKLLLQVHDELVFEVPPSELEK 1012 Query: 896 VAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 + + I MEN L VPL+V++ G+NW + Sbjct: 1013 MQQLIKSTMENAVTLKVPLIVDIHGGKNWMET 1044 >UniRef50_A5CDT3 DNA polymerase I n=2 Tax=Orientia tsutsugamushi RepID=A5CDT3_ORITB Length = 910 Score = 843 bits (2177), Expect = 0.0, Method: Composition-based stats. Identities = 318/933 (34%), Positives = 495/933 (53%), Gaps = 57/933 (6%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 M + L+DG +++RAY LT+ G P G +YG M+ ++I ++ P + V Sbjct: 22 MCSFKNKKIFLLDGYPFIFRAYFVNQDLTSHNGNPIGGVYGFATMIMNIISEFNPEYMVV 81 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 VFD FR +++ YKSHRP +P +L+ Q + +VK + + + + GVEADDVI + Sbjct: 82 VFDTGLDNFRHKIYPEYKSHRPELPSELKIQFPLVREIVKYLNINTIEMEGVEADDVIAS 141 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL 180 LA + A ++I + DKD+ QLV + + + + + +E + K GV P + DFL Sbjct: 142 LANKFGNASDEIIIVSSDKDLLQLVNNKVYIYDPIKKQYIREKETIEKLGVRPSQVRDFL 201 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 +L GD SDNIPG+PG+G KTA LL+ L+ + IA R +E+++ Sbjct: 202 SLTGDVSDNIPGIPGIGPKTAIKLLEQFDSLNNILHNYANIASPRHR------KLIEEHR 255 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 ++A LS+QL +K D+ L L+ E L P AE++ L K+ F Sbjct: 256 QLAELSWQLVGLKQDLNLNLSVENLRWSPPNAEQIRTLIHKFGFTSLITK---------- 305 Query: 301 GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDS 360 A K + + + + P A+ IS + I + E K +++ A E + Sbjct: 306 -ASKLFKLELSHLIAKYPLSRASNISK---IEITNPEIWLQVKNKAQESGYLAVLLEKE- 360 Query: 361 LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLK--PLLEDEKALKVG 418 N + ++F+++ +I + ++ LL D K+ Sbjct: 361 ----KNNYISITFSLDLHKLYFIDLTAITSKEQNRAIATNPWWKSSIIELLLDSSIQKIT 416 Query: 419 QNLKYDRGILANY---GIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEE 475 NLK L N+ I D ML YIL++ ++ + + + ++ E Sbjct: 417 YNLKELLIFLLNFLRTEITSASCIDDIMLMHYILSAGKNDLSLNEIIQTY----NKSYSE 472 Query: 476 IAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVP 535 +Y+ + +L K+K L+ + I++P+ Sbjct: 473 --------------------QYSENKVCWLKNTFDNLMSELFKNK-LLHCYYEIDLPICY 511 Query: 536 VLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG 595 +L IE NG+KI+ +L S +L ++ LE++ ++I G+EFN++S KQL ILF+ Sbjct: 512 ILRNIENNGIKINVPLLKELSAQLKHKIELLEQQIYKICGQEFNIASPKQLGEILFDVLK 571 Query: 596 IKPLKKT-PGGAPSTSEEVLEELAL-DYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTG 653 + K + + ST EVLE L+ + ++L++R L KL +TY D LP IN T Sbjct: 572 LPHAKVSQKTKSYSTDSEVLENLSRAGIKIADLLLKWRQLTKLLTTYIDTLPTQINNNTF 631 Query: 654 RVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRI 713 R+HT+ Q T T RLSS PNLQNIP+R+E G ++R AF+AP+ I+SADYSQIELRI Sbjct: 632 RIHTTLLQTSTTTSRLSSHSPNLQNIPIRSEYGLKVRSAFVAPQGSKILSADYSQIELRI 691 Query: 714 MAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGL 773 +++ + + L F G+DIH +TAA++F + + VT E RR AKAINFG+IYG+SAFG+ Sbjct: 692 LSYFANIEQLKNVFIMGEDIHSSTAAQIFKINADQVTEEHRRKAKAINFGVIYGISAFGV 751 Query: 774 ARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNG 833 A+QLNI EA +Y++ YF+ YP + +YM+ T+ A E GYV+ + GRR Y+P I SSN Sbjct: 752 AKQLNISNTEAAQYINHYFQEYPSIRQYMDETKKFAVENGYVKNMIGRRCYIPLINSSNL 811 Query: 834 ARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDV 893 R A+RAAINAP+Q TA+DI K AMI + + ++ P +++++QVHDELVFE+ + V Sbjct: 812 TTRNFAQRAAINAPIQSTASDIAKIAMIQYEKLIYSKYPAIKLLLQVHDELVFELPNELV 871 Query: 894 DAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 D I MEN PL VE+ G+NW + Sbjct: 872 DTACNLIKCTMENIPYFSFPLKVELKIGDNWGE 904 >UniRef50_Q7VGK4 DNA polymerase I n=8 Tax=Campylobacterales RepID=Q7VGK4_HELHP Length = 912 Score = 841 bits (2173), Expect = 0.0, Method: Composition-based stats. Identities = 314/926 (33%), Positives = 507/926 (54%), Gaps = 23/926 (2%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 N L ++D + +R+++A PPL N G PTG + G N+L+SL T+ A + G Sbjct: 2 NTLSVIDTFGFFFRSFYALPPLKNKEGFPTGLLVGFCNLLQSLYKDPSCTYLAFALEGGG 61 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 + R ++++ YK +R P P +L Q+ ++ MG +++ G EADDVI ++ + A Sbjct: 62 ENKRRQIYDAYKRNRQPPPQELLMQLPIAIEWIEKMGFLNISIEGYEADDVIASINKVAN 121 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDS 186 V I + DKD+ QL+ N + + + + E + KYGV P+ ID+ +L+GD+ Sbjct: 122 AQNIVVRIISHDKDLYQLIDENTYIYDPIGKRDIREAECLYKYGVNPKNFIDYQSLVGDT 181 Query: 187 SDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLS 246 SDNI G+ G+G K+AQ L+ G +++LY E+ + L +A L + K A+LS Sbjct: 182 SDNIVGIKGIGAKSAQKLITHFGSIESLY---ERESELEEVVTPRIAHLLREGKNNAFLS 238 Query: 247 YQLATIKTDVELELTCEQLEVQQPAA-EELLGLFKKYEFKRWTADVEAGKWLQAKGAKPA 305 +L T+ D+ + + + + ++L KKY+ K + V++ A+ Sbjct: 239 KKLVTLYDDLLENIDLSKCLMPESNPMLKILDELKKYDLKNIISKVQSPHERYAQKRSAQ 298 Query: 306 AKPQETSVADEAPEVTATVISYDNYVTILDE-ETLKAWIAKLEKAPVFAFDTETDSLDNI 364 + + E +++ S+ +LD L+A + + FD E+DSL+ Sbjct: 299 KGIGSLNDMPDVIESSSSAQSFSFKAHLLDNFTALEAVLDSIPSGAKIGFDCESDSLNMQ 358 Query: 365 SANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYD 424 ANLVG SF + A Y+PV H YL Q++ +A LK + +G NLK+D Sbjct: 359 EANLVGFSFCFDGENAYYVPVGHHYLGVGCQLTHTQAKIALKRIFTYP---LIGHNLKFD 415 Query: 425 R-GILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQ 483 I +E G +D+M+ ++ +S+A +D +W H I+F+ + K +N Sbjct: 416 LSLIFHTLELEHTGEIYDSMILGWLYDSIAPI-GLDKQMLKWFNHTMISFDSVVAKDEN- 473 Query: 484 LTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKG--PLNVFENIEMPLVPVLSRIE 541 F+Q+ + A +YAAEDA T +L+ ++ K + L + +E P + VL +E Sbjct: 474 --FSQVNIAAATQYAAEDAIATFRLYHRLEEVFYKREWSSILELANKLEYPFIKVLLAME 531 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 G+K+D +L + E+ + +++L + E+ GE FNL+S +QL ILF + G+K + Sbjct: 532 CEGIKVDIPLLESLKEKASEHISQLSAQIFELCGETFNLNSPQQLAHILFNRLGLKAGRS 591 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKT-GRVHTSYH 660 GG ST E L + +P+ +IL+YR + KLKSTY + L + R++TS+ Sbjct: 592 VKGG-LSTDERTLLAIIDAHPVIALILDYREVNKLKSTYIEPLLRFGSANDKHRIYTSFL 650 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRD 720 Q+ TATGRLSS PNLQNIPVR EEGR+IRQAFI+ E + ++S DYSQIELR++AH +D Sbjct: 651 QSGTATGRLSSKSPNLQNIPVRREEGRKIRQAFISKEGHSLISIDYSQIELRLLAHFCKD 710 Query: 721 KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 L+ +F + KDIH TAA +FG+ + +++R AK+INFGLIYGM + LA+ L I Sbjct: 711 SSLIESFKQDKDIHFETAARLFGV---ELAAQKRAIAKSINFGLIYGMGSKKLAQTLQIS 767 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 KEA+ Y++ YF +P + ++ + E GY +TL G R Y D K++ +A Sbjct: 768 LKEAKNYIESYFALFPTIKNFLNAQKEFLLENGYSQTLLGHRRYF-DFKNATDFMKANFL 826 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 R IN+ QG+AAD+IK +M + +M++QVHDEL+FE ++ A++ Sbjct: 827 REGINSIFQGSAADLIKLSMCEIHKRY--GHSDFKMLLQVHDELIFEAPQEKAHIYAQEA 884 Query: 901 HQLMENCTRLDVPLLVEVGSGENWDQ 926 Q+M + L+VPL + G+NW + Sbjct: 885 AQIMNHIYELEVPLKCGISIGKNWAE 910 >UniRef50_A0JWM3 DNA polymerase I n=7 Tax=Actinobacteria (class) RepID=A0JWM3_ARTS2 Length = 955 Score = 839 bits (2168), Expect = 0.0, Method: Composition-based stats. Identities = 315/932 (33%), Positives = 486/932 (52%), Gaps = 53/932 (5%) Query: 6 QNPLILVDGSSYLYRAYHAFPP--LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 Q L+++DG S +RA+ A P + +AG+ T A++G +ML +LI + KPTH AV FD Sbjct: 65 QPRLLVLDGHSMAFRAFFALPADKFSTAAGQHTNAIHGFTSMLINLIKEQKPTHVAVAFD 124 Query: 64 -AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 + T R + YK R P ++ QI+ + ++ A G+ + + G EADDV+ TLA Sbjct: 125 VSDETTHRKAEYSEYKGGRNETPREMSGQIDLIDKVMGAWGIKTIKMPGYEADDVLATLA 184 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPELIID 178 EKAG VL+ TGD+D QL+T N+ ++ L + KY V P D Sbjct: 185 AMGEKAGYEVLLVTGDRDAFQLITDNVFVLYPRKGVSDIPRLDAPAIQEKYFVSPAQYSD 244 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 AL+G+S+DN+PGVPGVG KTA + GGL+ + +KI G + L + Sbjct: 245 LAALVGESADNLPGVPGVGPKTAAKWINLYGGLEGVLEHLDKIGG-------KVGDSLRE 297 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 N + + +L + TD+EL +T + L +P L LF + EFK + A Sbjct: 298 NVDAVKRNRRLNRLHTDLELPVTLDDLADPRPDQAALEQLFDELEFKTIRTRLFA----- 352 Query: 299 AKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTET 358 A+E + +Y T L A++A Sbjct: 353 ------------LYGAEEVDLAERESLDIPDYSTPAGAAELSAFLAAGAGQRSAVAVDLV 400 Query: 359 DSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVG 418 A + + + G A YI ++ +A + ++ L D +A KV Sbjct: 401 PGRIGEDAAALAI---VRDGAAVYIDLSGQDAEAENVLA---------AWLRDPEAPKVM 448 Query: 419 QNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAG 478 K L+ G+EL G+ DT + Y++ +++ LA+ L + T +A Sbjct: 449 HGFKAALKALSARGLELEGVVDDTSISGYLIQPDRRTYELAELAQHHLNIEIST--AVAK 506 Query: 479 KGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLS 538 G+ +L+F+ AG A V L +L K + + +E+P+ VL+ Sbjct: 507 AGQLELSFDGDDSAAAGE-LVHAAAVVHALSRYFEAEL-KERKAEELLSTLELPVSQVLA 564 Query: 539 RIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKP 598 +E G+ ID + + +L + ++ A G E NL S KQLQT+LF++ + Sbjct: 565 DMELAGIAIDMQRMDEQLADLAKVIDNAQELAFAAIGHEVNLGSPKQLQTVLFDELQLPK 624 Query: 599 LKKTPGGAPSTSEEVLEELALD--YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVH 656 KK G +T L+ L + ++ +R +KL+ + L + + GR+H Sbjct: 625 TKKIKSGY-TTDAASLKNLLEKTGHEFLVQLMAHRESSKLRQML-ESLKKSV-AEDGRIH 681 Query: 657 TSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY-VIVSADYSQIELRIMA 715 T+Y Q V ATGR+SS +PNLQNIP+R+EEGRR+R F+ E Y ++SADYSQIE+RIMA Sbjct: 682 TTYAQNVAATGRISSNNPNLQNIPIRSEEGRRVRGIFVVSEGYECLLSADYSQIEMRIMA 741 Query: 716 HLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLAR 775 HLS D GL+ A+ +G+D+HR + +F +P + VTS R KA+++GL YG+++FGL++ Sbjct: 742 HLSGDAGLIQAYRDGEDLHRFVGSNIFHVPTDQVTSAMRSKVKAMSYGLAYGLTSFGLSK 801 Query: 776 QLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGAR 835 QL I EA+ M YF+R+ V +Y+ QA+ G+ T++GRR YLPD+ S++ Sbjct: 802 QLEISVDEARTLMKEYFDRFGAVRDYLRGVVDQARIDGFTATIEGRRRYLPDLTSTDRQL 861 Query: 836 RAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDA 895 R AER A+N+P+QG+AADIIKRAM+ V A L+A+ + RM++QVHDELV EV + +A Sbjct: 862 RENAERIALNSPIQGSAADIIKRAMLGVHAELKAQGLKSRMLLQVHDELVLEVAAGEREA 921 Query: 896 VAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 V K + + M + L VPL V++G G +W A Sbjct: 922 VEKLVTEQMGSAADLSVPLDVQIGVGPSWYDA 953 >UniRef50_A9KNZ3 DNA polymerase I n=4 Tax=Firmicutes RepID=A9KNZ3_CLOPH Length = 994 Score = 839 bits (2168), Expect = 0.0, Method: Composition-based stats. Identities = 330/990 (33%), Positives = 513/990 (51%), Gaps = 88/990 (8%) Query: 9 LILVDGSSYLYRAYHAFPP-------------------LTNSAGEPTGAMYGVLNMLRSL 49 L+++DGSS L + P + + G T A+YG L +L + Sbjct: 21 LLVIDGSSLLSTQFFGNLPKEIMFAKTMEEKEKYFPKIMQTATGVYTNAVYGFLRVLLKI 80 Query: 50 IMQYKPTHAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAV 109 I KPT+ AV +D TFR E++ YK +R + L+ Q + ++K MG+ Sbjct: 81 IKDQKPTYLAVAWDISRNTFRREIYPDYKGNRGETLEPLKDQFKLCQHVLKEMGIVQFMD 140 Query: 110 SGVEADDVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLIN---------------- 153 EADD GTL ++ E+ P+ + T D D QL+T L Sbjct: 141 ERYEADDFSGTLCQKFEEE-VPIRVMTKDNDYLQLITERTNLWLIHSTAKKTDELYEKYG 199 Query: 154 --------TMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALL 205 + PE V ++G+ P + + GDSSDNI GVPGVGE TA AL+ Sbjct: 200 LSKKELNVPDRTFLFTPELVEKEFGIEPSSVPSLKGIGGDSSDNIKGVPGVGEATAVALI 259 Query: 206 QGLGGLDTLYA---EPEK--------------IAGLSFRGAKTMAAKLEQNKEVAYLSYQ 248 + ++ LY ++ I ++ ++ A LS Sbjct: 260 KEYKTVENLYEILNNLDETGKKEINEYWKTLGIKRTPINALLKISDTELVGEKAAILSKT 319 Query: 249 LATIKTDVEL-ELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAK 307 LATIK D++L +L EQL + E F + EFK D + + A Sbjct: 320 LATIKKDIDLKDLGLEQLRIH-INTENAQKCFNELEFKTIKMDNAEVEDSSINNLRFEAD 378 Query: 308 PQETSVADEAPEVTATVI----------SYDNYVTILDEETLKAWIAKLEKAPVFAFDTE 357 + + E E + + + D+ K I +++K + D Sbjct: 379 KIKITSNLEEVETLFSNLIKLWEKNQKKLKKTKKSRNDKSDSKITIKEIKKPEYASEDAV 438 Query: 358 TDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKV 417 L + +LVG+S + IP I+ + L LLE + L + Sbjct: 439 GIKLIMENKSLVGISVYYGSEASFIIP-------CEGFITPDFLTSKLNGLLEKKITLAI 491 Query: 418 GQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIA 477 KY L FD + Y+L A ++ ++AE++L+ + +E+ Sbjct: 492 FDIKKY----LPYLNANEESPCFDVTIAGYLLEPDASTYEYQTIAEKYLELDLPSEKEVF 547 Query: 478 GKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVL 537 G+ + + + ++ + A ++ V ++ + L +G L +F IEMPLV L Sbjct: 548 -SGQTYASLSLLDQDQYKKAACYESYVAHHIYPVLL-KLLSERGLLPLFAGIEMPLVYTL 605 Query: 538 SRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIK 597 +E+ G+++D L ++S++L + + ELEK+ E+ G EFN++S KQL ILF++ G+ Sbjct: 606 YDMEQRGIRVDTNGLKDYSDQLGVSIVELEKQIFELVGVEFNINSPKQLGEILFQRLGLS 665 Query: 598 PLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHT 657 KKT G STS EVLE+L+ ++P+ K+IL+YR L KLKSTY D L + GR+H Sbjct: 666 YGKKTKTGY-STSAEVLEKLSSEHPVIKLILQYRQLTKLKSTYADGLVSYV-EGDGRIHG 723 Query: 658 SYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHL 717 +++Q + ATGRLSST+PNLQNIP+R E GR+IR+ FI + Y+ + ADYSQIELR++AH+ Sbjct: 724 TFNQTIAATGRLSSTEPNLQNIPIRMELGRKIRKVFIPEDGYLFLDADYSQIELRLLAHM 783 Query: 718 SRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQL 777 S D L+ A+ + +DIHR TA+EVF P + VTS QR +AKA+NFG++YG+S+F L + L Sbjct: 784 SNDARLIEAYRQAQDIHRLTASEVFHTPFDEVTSAQRSNAKAVNFGIVYGISSFSLGQDL 843 Query: 778 NIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRA 837 +I RKEA++Y++ YF YPGV Y++ + KE G V+TL GR +P++ +SN +R+ Sbjct: 844 DITRKEAEEYINKYFMTYPGVKTYLDGLIEEGKETGVVKTLYGRIRPVPNLTNSNFMKRS 903 Query: 838 AAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVA 897 A ER A+N+P+QGTAADI+K AMI V+ L+ + + R+++Q+HDEL+ E H+ +V+ VA Sbjct: 904 AEERIAMNSPIQGTAADIMKLAMIHVNQVLKERKLKSRLLLQIHDELLVETHESEVEEVA 963 Query: 898 KQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 K + + M+ L VPL VEV +G NW +A Sbjct: 964 KIMKEEMQQAASLSVPLEVEVANGNNWYEA 993 >UniRef50_C2D755 DNA-directed DNA polymerase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D755_9ACTN Length = 1030 Score = 839 bits (2168), Expect = 0.0, Method: Composition-based stats. Identities = 317/990 (32%), Positives = 487/990 (49%), Gaps = 97/990 (9%) Query: 7 NPLILVDGSSYLYRAYHAFP-PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 + ++DG+S ++RA+HA P++ G T A+ G NML L+ + P FD Sbjct: 68 KTIAVIDGNSLMHRAFHAIMQPMSAPDGRSTNALLGFFNMLIKLVRSFSPDGIICAFDKG 127 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 R ++ YK+ RPPM L Q + +++A+ +P++ + G E DD++GTLA + Sbjct: 128 KPQVRIDMLPQYKAQRPPMDPSLHEQFPMVKELLRALQIPVVELQGWEGDDILGTLAHQG 187 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKY-GVPPELIIDFL 180 E G +L+ TGD+D+ QL T ++++++T I+ PE+V + Y G+ P L+ DF Sbjct: 188 ELQGYSMLLFTGDRDIYQLATEHVSVVSTKKGVSDVRIMTPEDVDDLYHGITPNLVPDFY 247 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 L GD+SDNIPGVPG+G K A AL+ G L+ + A ++++G M L + Sbjct: 248 GLKGDTSDNIPGVPGIGPKRAAALIVEYGSLEGVIAHADQVSG-------KMGENLRNHI 300 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADV--------- 291 + A LS ++ATI+ D + + E+ F F + Sbjct: 301 DDARLSKRVATIRRDAPITVDLCAAAFPTFDPAEVARAFCALGFTNLVPKLLRFLPSLNG 360 Query: 292 ---------EAGKWLQAKGAKPAAKPQETSVADE--------APEVTATVISYDNYVTIL 334 A + PA+ T AD + + T D T+ Sbjct: 361 ADIKGIIHDAATAAKRNSAVLPASAQHTTMSADSLTSSVQAHSTQATPLDSLVDRAQTVH 420 Query: 335 DEETLKAWIAKLEKAPVFAF---DTETDSLDNISANLV--GLSFAIEPGVAAYIPVAHDY 389 E + AP ++ +V G+ A AY P + Sbjct: 421 ASEEEQTQSEVNTYAPDYSALFPACVQTQAHAFIKRVVSCGIWVAC-----AYEPASMKS 475 Query: 390 LDAPDQISRERALELLKPLLEDEKAL----------------KVGQ----NLKYDRGILA 429 Q S + L+ + D L K G N K +L Sbjct: 476 AQENVQPSFDTLLDTHTLWVTDGTTLAQFSGTDVSSVLKTLVKSGHVIALNCKALLHVLY 535 Query: 430 N------YGIELRGIA----FDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 +EL I+ FD L +Y+LNS A + +L +L Sbjct: 536 PPVSSEPASLELSDISTAALFDVGLAAYLLNSDANDYSWQTLCSAYLPTFVYPD------ 589 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 +E YA E A L+ + +L G ++F +E+PL+PVL Sbjct: 590 -------TTDDTDEPNEYALE-AIAVRALYPVL-RELLHTDGSDDLFYELELPLIPVLLH 640 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIK-- 597 +ERNG+ D +L S L+ L + + +A ++FN+ S QL +LF+ G+ Sbjct: 641 MERNGIYCDKHLLAEQSRALSHELNAMSLELRRLAQQDFNIDSPMQLSHVLFDVWGLPTK 700 Query: 598 PLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHT 657 LKKT G ST+ + L L++ ++IL+YR K+K+TY D L I GR+H+ Sbjct: 701 GLKKTRRGYYSTNAQTLASLSMADERVQLILDYRERMKIKNTYLDALVHDIRS-DGRIHS 759 Query: 658 SYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHL 717 +++Q + ATGRLSS+DPNLQNIP R+ G R+R+AF+ P +++ ++ DYSQIELR++AHL Sbjct: 760 TFNQTIAATGRLSSSDPNLQNIPTRSSLGHRVRKAFVLPRNHLFLACDYSQIELRLLAHL 819 Query: 718 SRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQL 777 S+D+ L+ AF G D H ATAA +F + + VT R AKA+NFG++YG AFGLA L Sbjct: 820 SQDEHLIHAFQTGADFHAATAARIFHVSPDEVTPALRSRAKAVNFGIVYGQQAFGLATSL 879 Query: 778 NIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRA 837 I RKEAQ+ +D YFE YPGV ++++ + A+E YV T+ GR+ ++ I S N R+ Sbjct: 880 KISRKEAQEMIDRYFEAYPGVRKFLDESVQFAREHSYVPTMYGRKRHIAQIDSRNFQLRS 939 Query: 838 AAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVA 897 AER A+N PMQG+AADIIK AMI V+ ++I+Q+HDEL FEV ++++ V+ Sbjct: 940 FAERTAMNHPMQGSAADIIKLAMIEVEKQFAQLGLASKLILQIHDELDFEVVPEELERVS 999 Query: 898 KQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 + + ME L VPL+ E+ +NW A Sbjct: 1000 SVVKRAMEGVVTLRVPLIAEISYADNWADA 1029 >UniRef50_Q4JW27 DNA polymerase I n=2 Tax=Corynebacterium jeikeium RepID=Q4JW27_CORJK Length = 859 Score = 839 bits (2168), Expect = 0.0, Method: Composition-based stats. Identities = 338/933 (36%), Positives = 489/933 (52%), Gaps = 88/933 (9%) Query: 8 PLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 L+L+DG S +RA++A P + G+ T A+YG L M +L+ + +PTH A FD Sbjct: 3 KLLLLDGHSLAFRAFYALPAANFSTVGGQHTNAVYGFLGMFLTLMDKEQPTHVAAAFDLS 62 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 G TFR+E F YK+ RP P++ + QIE + ++A+G+ L EADD+I TLA E Sbjct: 63 GPTFREESFPEYKAQRPSTPEEFKGQIELIRRTLEALGVTTLDKESYEADDIIATLATEG 122 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPELIIDFLA 181 K G VLI TGD+D QLVT ++T++ T+ P+ V KYGV P D A Sbjct: 123 AKDGMDVLICTGDRDSLQLVTEDVTVLYTLKGVSELHRFTPQAVEEKYGVTPTQYPDLAA 182 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 L GD+SDN+PGVPGVG KTAQ + G L + + I G + A L +N + Sbjct: 183 LRGDTSDNMPGVPGVGPKTAQKWIAKYGSLQGVIDNMDDIGG-------KVGANLRENID 235 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 L+ + + D++L + L E LG+F++ +F + A K + + Sbjct: 236 NVVLARDITEMVRDLKLVDDLDALSPHDIDPNEALGMFEELQFGTGLRN-RAFKIMGVEF 294 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTET-DS 360 A AA P L AW+ K + V D E Sbjct: 295 ADSAAVPVTVEKPKPGK--------------------LGAWLKKRTRGTVVDVDGEQLTL 334 Query: 361 LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN 420 LD + +V D D ++ + L L + +A K + Sbjct: 335 LDRDNVVIVQ--------------------DLADVAPKDE--KALAEWLANPQATKWLHD 372 Query: 421 LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG 480 K L N G+ L G+ DT L +Y+L + + +R + H+ Sbjct: 373 SKKAYHTLQNQGLTLDGVEHDTSLAAYLLRPDVRTLSLADVVQRHVGHELSE-------- 424 Query: 481 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI 540 G E A +L + P+++ G ++ ++E+PL +L+ + Sbjct: 425 --------------GATGPERAQAVAELVKALTPEIEAA-GQAELYFDLEVPLALILAAM 469 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGE-EFNLSSTKQLQTILFEKQGIKPL 599 E G+ +D L S++ RL E A E+AGE E NLSS KQLQ +LFE + Sbjct: 470 EHAGIAVDDAALQELSDDYGARLNEEIAAARELAGEPELNLSSPKQLQKVLFETFDLPKT 529 Query: 600 KKTPGGAPST--SEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHT 657 KKT G ST +E ++P ++ +R K+KST D L + GR+HT Sbjct: 530 KKTKTGY-STAAAELEKLAAQSNHPFLGHLMAHREYQKMKST-IDGLIEAV-GDDGRIHT 586 Query: 658 SYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY-VIVSADYSQIELRIMAH 716 +++Q ATGRLSS+DPNLQNIPVR + GR+IR AF E Y +++ADYSQIE+R+MAH Sbjct: 587 TFNQKGAATGRLSSSDPNLQNIPVRTDAGRKIRAAFTVGEGYETLLTADYSQIEMRVMAH 646 Query: 717 LSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQ 776 LS D GL+ A+A G+D+H + VF +P++ VT E RR KA+++GL+YG+SAFGL++Q Sbjct: 647 LSEDAGLIEAYASGEDLHNYVGSRVFDVPVDEVTPELRRRVKALSYGLVYGLSAFGLSQQ 706 Query: 777 LNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARR 836 L I EA++ MD YFER+ GV Y++ AKE GY ETL GRR YLP++ SSN R Sbjct: 707 LKISAWEAKRIMDNYFERFGGVKRYLDHVVEVAKETGYTETLYGRRRYLPELNSSNRVAR 766 Query: 837 AAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAV 896 AERAA+NAP+QGTAADIIK AM+ VD + +Q R+++QVHDELV EV +++ + Sbjct: 767 ENAERAALNAPIQGTAADIIKLAMLRVDREITRQQLASRVLLQVHDELVVEVAPGELEQI 826 Query: 897 AKQIHQLMENCTRLDVPLLVEVGSGENWD-QAH 928 + + + M+ +L VPL V G+G+NWD AH Sbjct: 827 TELVEREMDAAAQLRVPLDVSAGTGDNWDLAAH 859 >UniRef50_B8DUU4 DNA polymerase I n=16 Tax=Bifidobacterium RepID=B8DUU4_BIFA0 Length = 960 Score = 833 bits (2151), Expect = 0.0, Method: Composition-based stats. Identities = 312/967 (32%), Positives = 474/967 (49%), Gaps = 56/967 (5%) Query: 3 QIPQNPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 Q + L+++DG S +RA++A P + G+ T A+YG ML +I KP V Sbjct: 6 QGTRGTLLVIDGHSLAFRAFYALPAENFSAKDGQATNAVYGFFTMLSQVIASQKPDLLGV 65 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 FD KG TFR+++ YK R P++L +QI + M++A G+ + G E DDVI T Sbjct: 66 AFDVKGGTFRNKMLTQYKGTREAAPEELISQIPLIQDMLEAFGVTYVTKQGYEGDDVIAT 125 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELI 176 LA E A + +GD+D QL+ +IT++ + + P+ V +KY V P Sbjct: 126 LATMGEHADYRTYVLSGDRDAFQLIDDDITVLYPGYHFKELKAMTPQAVEDKYHVTPRQY 185 Query: 177 IDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKL 236 D AL G+++DNIPGVPGVG+ A + GGLD + ++I G L Sbjct: 186 PDLAALRGETADNIPGVPGVGDGFAAKWINQYGGLDGVIEHADEIKG-------KKGDAL 238 Query: 237 EQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEF-----KRWTADV 291 ++ E L+ ++ + D++L + L + + LF + F + Sbjct: 239 RESIEQIRLNRKVNALVRDLDLGVDIADLTFGKVDPAKAEELFNQLNFGARIRSKLLKTF 298 Query: 292 EAGKWLQA--KGAKPAAKPQETSVADEAPEVTATVISYDNYVT--ILDEETLKAWIAK-- 345 AG Q K A A + + D+ T + V I +L+AW + Sbjct: 299 NAGDPGQPVAKKASDAERFEFEGEFDDGSFDTPESVRVQEPVVDEIDAPASLEAWAQQHC 358 Query: 346 -LEKAPVFAFDT-----ETDSLDNISANLVGLSFAI------EPGVA-----AYIPVAHD 388 + + T E D+ V S+++ +PG + A + H Sbjct: 359 PIASGKSISSTTLDVVGEYDAQSQQCVEAVEGSWSLFASGSPKPGRSSISGLALMADGHA 418 Query: 389 YLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYI 448 + P E+ L+ +L+ A K +L + L + FDT L Y+ Sbjct: 419 VVVDPH---DEQYHMALQRILDTYAATLSVHGYKEHLHMLGAVNLRLPMVLFDTNLAGYL 475 Query: 449 LNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQL 508 ++ + A+ +L E +G + + E R +A + L Sbjct: 476 IDPDFQGGSLQDCADHFLHRHAEEVTETE-QGTLDIGMDD-ERAERDRKVVRNAAIVSLL 533 Query: 509 HLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEK 568 + L++ + ++ +IE+P L +E G +D L E T +E+ Sbjct: 534 ARTLARQLEQ-RCQYSLLRDIELPTSVALFHMEHTGASVDRARLDELLEMFTDESNRMEQ 592 Query: 569 KAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEEL-------ALDY 621 +E AG E NL S KQL +LFE+ G+ P KKT G+ ST+ + L L + Sbjct: 593 ICYEAAGHEVNLQSPKQLGVVLFEEMGLNPTKKTKRGSYSTNAKALTTLYATSEEGSRPN 652 Query: 622 PLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPV 681 +L +R + KL+ L INP+ GR+HT++ Q V ATGRLSS DPNLQNIP Sbjct: 653 EFLGALLRHREVNKLRQI-VQTLIDAINPRDGRIHTTFTQTVAATGRLSSVDPNLQNIPN 711 Query: 682 RNEEGRRIRQAFIAPEDYV-IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAE 740 RN GR IR AF+ E + ++SADYSQ+ELRIMA LS D+ L+ AF G D HR A+ Sbjct: 712 RNATGRDIRSAFVPGEGFADLLSADYSQVELRIMADLSGDEALIKAFKSGADFHRYVASM 771 Query: 741 VFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLE 800 V+G+P++ VT +QR KA+++GL YG+S +GL++QL IP KEA YF+ + V + Sbjct: 772 VYGIPVDEVTPDQRNHVKAMSYGLAYGLSTYGLSQQLGIPSKEAAALRSRYFQTFGKVHD 831 Query: 801 YMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAM 860 Y+E + A+ GY +T+ GRR Y P + S+N R AAER A+NAP+QGTAADI+K AM Sbjct: 832 YLESLVSNARNTGYTQTMFGRRRYFPALTSANRVARDAAERGALNAPIQGTAADIMKIAM 891 Query: 861 IAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGS 920 I VD L+ R+++Q+HDELV E+ + V + + ME+ + VPL V G Sbjct: 892 IRVDRALRDGNLNSRIVLQIHDELVVELAPGEEKRVTELVRDAMEHAVNIAVPLDVSTGV 951 Query: 921 GENWDQA 927 G +W QA Sbjct: 952 GSDWQQA 958 >UniRef50_UPI0001C32326 DNA polymerase I n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C32326 Length = 884 Score = 829 bits (2142), Expect = 0.0, Method: Composition-based stats. Identities = 314/934 (33%), Positives = 487/934 (52%), Gaps = 75/934 (8%) Query: 1 MVQIPQNP--LILVDGSSYLYRAYHAFP-PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTH 57 + P P L L+DG+S YRA+ A P + S G PT A++G +ML ++ +Y P Sbjct: 18 VAAAPDKPDELFLIDGNSLAYRAFFALPESIATSTGFPTNAIFGFASMLVKILTEYGPRA 77 Query: 58 AAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDV 117 V +D +G + R E++ YK+ R PD + Q L +V++ G +++ G EADDV Sbjct: 78 TIVAWD-RGHSGRREVYPEYKAQRSSRPDLFKQQWPHLEPLVESFGYQNVSLDGYEADDV 136 Query: 118 IGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPP 173 I TLA A+ AG PV++ TGD+D QLV + ++ T + V+++YG+PP Sbjct: 137 IATLAERAKAAGIPVMVVTGDRDSFQLVDEGVQIMATSRGITETRTYDRQGVIDRYGIPP 196 Query: 174 ELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMA 233 EL+ DF+ L GD+SDNIPGVPG+G+KTA LL G L+ + A I A+ Sbjct: 197 ELVPDFIGLKGDTSDNIPGVPGIGDKTAAQLLNDFGDLEGVLANAHTI------RARKRR 250 Query: 234 AKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEA 293 L ++ E A +S QLAT++ D+E+ + + +P L F+++E + +E Sbjct: 251 ENLIEHAEDARVSKQLATMRRDLEVAIDVAAVHGAEPDRSRLRETFREFELRDPLRRLEE 310 Query: 294 GKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFA 353 G + A +PQ A+ A + + ++ A A+ + P A Sbjct: 311 A---LGDGDEAAPRPQ----AERAIGAKLRTGAVADLASLAPAGGEIALAAREPEKPDDA 363 Query: 354 FDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEK 413 E+D+ F G A DA ++ + Sbjct: 364 LFGESDA----------WRFGAYAGQDAL--AGECGGDAGPEVLAAAI----------GE 401 Query: 414 ALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITF 473 + + K R + +A DT++ +Y+L + +D L E Sbjct: 402 RPALAHDAKALREV-------PATLAHDTLIAAYLLEPARRSYPLDELTE---------- 444 Query: 474 EEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPL 533 E G L A A P L++ + L +F+++E+PL Sbjct: 445 ERGIGTDVEDAAAADAILVHALTAA-------------QRPQLEERE-LLPLFDDVELPL 490 Query: 534 VPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEK 593 V VL +E G+++D ++L + LE++ E+ GEEF + S +QL ILFEK Sbjct: 491 VRVLRAMETAGLRLDTELLATIRTRVMDEAVALEREIWELTGEEFMIGSPQQLGQILFEK 550 Query: 594 QGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTG 653 G+ ++ G ST VL+ + ++P+ + I +R L KL STY D LPL+I+P+ Sbjct: 551 LGLSRKRRGKTGY-STDARVLQAIRGEHPVIEKIERWRELTKLASTYLDALPLLISPEDH 609 Query: 654 RVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRI 713 R+HT+++Q ATGRLSST+PNLQNIP+R GR IR F+A V++SADYSQ+ELR+ Sbjct: 610 RLHTTFNQVTAATGRLSSTNPNLQNIPIRTPLGREIRACFVAEPGNVLISADYSQVELRV 669 Query: 714 MAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGL 773 +AH++ ++ L F G+D+H ATAA + G+ E + + R AK +N+G++YG+SAFGL Sbjct: 670 LAHIAGEEVLKEIFRRGEDVHTATAAAILGIDPEQLDAGSRSKAKMVNYGIVYGLSAFGL 729 Query: 774 ARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNG 833 A +L IPR+EAQ+++D Y + +P V ++ T QA +QGYV TL GRR +P++++ N Sbjct: 730 ADRLQIPREEAQEFIDRYLDGFPAVQAFIRTTIEQATDQGYVTTLMGRRRQIPELRARNY 789 Query: 834 ARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDV 893 R ER A+N +QGTAAD+IK AM+ D L A R R+I+Q+HDEL+FE ++ Sbjct: 790 QMRQLGERLAVNTVIQGTAADVIKLAMVNADRALHASGLRTRLILQIHDELLFEGPAEEA 849 Query: 894 DAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 + + M + LD PL+V+ G G NW A Sbjct: 850 EQARDLVVPQMVDALELDPPLVVDAGIGPNWLDA 883 >UniRef50_C2BWF0 DNA-directed DNA polymerase n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BWF0_9ACTO Length = 932 Score = 827 bits (2136), Expect = 0.0, Method: Composition-based stats. Identities = 321/956 (33%), Positives = 497/956 (51%), Gaps = 55/956 (5%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPP--LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 + + L+++DG S +RA+ + P S G T A++G +ML ++I KPTH Sbjct: 1 MSKKRLLVLDGHSLAFRAFFSRDPEHFRTSTGVYTNAVHGFFSMLLTMIRAEKPTHIGAA 60 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 FD +FR +++ YK R P + Q+E + M+ AMG+ L VEADD++ TL Sbjct: 61 FDLSRHSFRTDIYPDYKGGRAETPPEFIGQVENIQKMLSAMGIKWLTEPNVEADDILATL 120 Query: 122 AREAEKAGRPVLISTGDKDMAQLVTPNITLINTMT----NTILGPEEVVNKYGVPPELII 177 A + K+G VL+S+GD+D QL++ ++T++ + P+ V ++Y V P+ Sbjct: 121 ATKGTKSGMEVLVSSGDRDSFQLISDDVTVLYPGRSISETKRMTPQAVKDRYDVWPQQYP 180 Query: 178 DFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLE 237 + AL+G+ +DN+PGVP VGEK A + + G LD+L +++ G L Sbjct: 181 EIAALVGEHADNLPGVPLVGEKVAASWINEYGSLDSLLEHRDELKG-------KRGENLR 233 Query: 238 QNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTAD-VEAGKW 296 Q+ + + QL ++TD++L L+ E L + + + + EFK+ + G+ Sbjct: 234 QHIDDVLRNRQLNRLRTDLQLPLSLEDLHWTGFDPQAIQEICDELEFKQMRTQILRLGQA 293 Query: 297 LQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDT 356 + E PE D Y + + + + F Sbjct: 294 FGVTSINGDSATMELDRTQTEPE----PQDADGYGVVPEPQ-------RFRLGSDFTATQ 342 Query: 357 ETDSLDNISANLVGLSFAIEPGV------AAYIPVAHD-----YLDAPDQISRERALELL 405 +D L N ++ +G+ GV ++ D L PD+++ + L Sbjct: 343 FSDWLQNTQSSSLGIWAVGNIGVTNPRIDWLFLAAERDCQGQCVLIVPDELTPQTEHLLC 402 Query: 406 KPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERW 465 L D K K + K R L +G EL G D + Y++N R + +R Sbjct: 403 DALAGDRK--KTVYDAKSLRHALHAHGWELHGAVTDIKMLDYLVNPDGNRTKFAGVTKRL 460 Query: 466 LKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLH-------LKMWPDLQK 518 L + K Q+T + + +E G +A+ TL L+M P L++ Sbjct: 461 LGWEIDEKPSDISKISEQMTLD-LGVELDGNSSAQPWPQTLINQAIYAYALLQMQPTLEQ 519 Query: 519 --HKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGE 576 H ++ +E PL +L ++E G+ ID L +++ L +A ++ A + G Sbjct: 520 LAHFRQVDGLLELENPLSYILEKMEYTGIGIDTIYLDEYAQSLQSEVAMAQQSAFDSIGR 579 Query: 577 EFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALD--YPLPKVILEYRGLA 634 E NLSS KQLQ +LF + + KKT G + + LEELA +P + +L +R Sbjct: 580 EVNLSSPKQLQEVLFTQLELPKTKKTKTGYTT-DAKALEELARYNPHPFLEALLYHRDRI 638 Query: 635 KLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFI 694 KL + GR+HT++ Q V ATGRLSS DPNLQNIP R +G++IR+AF+ Sbjct: 639 KLLQIVRN--LRERVADDGRIHTTFGQTVAATGRLSSIDPNLQNIPARTVDGQKIREAFV 696 Query: 695 APEDYV-IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQ 753 + Y +++ADYSQIE+RIMAHLS D+GLL AFA G+D+HR+ AA V+G+ + VT Q Sbjct: 697 PQKPYAALMTADYSQIEMRIMAHLSGDEGLLAAFASGEDLHRSVAALVYGVQPDEVTPTQ 756 Query: 754 RRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQG 813 R KA ++GL YG+SA+GLA QLNI +++A++ MD YFER+ V EY+ + A A G Sbjct: 757 RSHVKATSYGLAYGLSAYGLAAQLNISQRDAKQLMDTYFERFGKVREYLNQIVATATRVG 816 Query: 814 YVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPR 873 Y ET+ GRR YLP+++S+N A RAA+NAP+QG+AAD++K AM+ VDA L+ EQ + Sbjct: 817 YTETMRGRRRYLPELRSTNRNVADNARRAALNAPIQGSAADLMKAAMLQVDADLRQEQLQ 876 Query: 874 VRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW-DQAH 928 R+++QVHDELV EV + + + + Q M +L VPL V VG G NW AH Sbjct: 877 SRVLLQVHDELVLEVAPGETERLETLVRQAMTGVAKLRVPLEVSVGIGPNWRAAAH 932 >UniRef50_B6WQX5 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WQX5_9DELT Length = 919 Score = 826 bits (2135), Expect = 0.0, Method: Composition-based stats. Identities = 326/948 (34%), Positives = 497/948 (52%), Gaps = 60/948 (6%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + P+ L+DGS+++YR + A + S G PT ++ V +L ++ + +P + A V D Sbjct: 9 LAAEPVFLMDGSAFIYRGFFANRNMQRSDGFPTNSLVVVSRVLLRILREERPRYFAFVQD 68 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 KG FR E+F YK++R P+DL Q++P+ MV+A+GL L G EADD I +LA Sbjct: 69 GKGPNFRHEIFPLYKANRDATPEDLVRQLDPIQRMVRALGLRLEVSQGCEADDCIASLAA 128 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN--TILGPEEVVNKYGVPPELIIDFLA 181 PV+I +GDKD+ Q + PN+ + + + ++ + + GV P D A Sbjct: 129 RFAGE-HPVIIVSGDKDLKQCLGPNVYMWDPASKEEKLVSEADFTAESGVTPGQWPDVQA 187 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 L+GD+SDNIPGVPG+G KTA+ + L+ + + AKL+++ E Sbjct: 188 LIGDTSDNIPGVPGIGPKTARQIFSICPSLEDIRDH-------FVLLPPKLQAKLQEHLE 240 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 ++ QL T+ + +T + L V+ A L +++E ++ A LQA Sbjct: 241 NMFIWRQLTTLSREACPGVTLDDLRVRPLDAATCALLTEEFELFALRRELAALDRLQAAE 300 Query: 302 AK------PAAKPQETSVADEAPEVTATVISYDNYVTILDEETLK--AWIAKLEKAPVFA 353 A A +E + + A S + + + + A Sbjct: 301 ADLPEEFLDAGSIREDARPAAGKKAAAEQASLPLAQPARSGRATSQMSLLDAMPQESAPA 360 Query: 354 FDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEK 413 D + D A V L +A A Y+ V + + + L L Sbjct: 361 LDDVSALPDCGDAR-VALIWAHGDREAPYLAVEGADGGSLGEWQWTGPVAELARWLA-PA 418 Query: 414 ALKVGQNLK------YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERW-- 465 V +LK LA + D + +Y+LN + L+ RW Sbjct: 419 RTLVTADLKGLLTSAPCWQFLAGRAAD----CIDLGVAAYLLNPEENDYGWPRLSARWGA 474 Query: 466 -LKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLN 524 L+H+ LE G A+ A + L + ++K G L Sbjct: 475 VLRHE---------------------LESRGETASGPARLGLAMAQLFEQRMEK-DGLLE 512 Query: 525 VFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTK 584 +F +EMPL+PVL+ +E++GV ID +++ +L +L +E+AG +FN+ S + Sbjct: 513 LFRRLEMPLLPVLAGMEQSGVAIDAAAFRAFLDDVQGQLDQLTAHVYELAGTQFNIRSAQ 572 Query: 585 QLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKL 644 QL +LF G+ +KT GG STS++ LE+LA +P+ IL+YR L K++STY D L Sbjct: 573 QLGDVLFNGLGLPAPRKTKGGQASTSQQTLEKLAGQHPVVDSILQYRKLEKMRSTYLDPL 632 Query: 645 PLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSA 704 P +++P+ GR+HT+++Q TATGRLSS++PNLQNIPVR G+R+R FIA ++VSA Sbjct: 633 PRLVDPQ-GRIHTTFNQKATATGRLSSSNPNLQNIPVRGPLGKRMRSCFIAGPGRLLVSA 691 Query: 705 DYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGL 764 DYSQ+ELR++AH+S+D LL AF G+DIH TAA V+ LP + V+ +QRR+AK INFGL Sbjct: 692 DYSQVELRVLAHVSQDPALLEAFRNGEDIHARTAALVYDLPPDQVSPDQRRNAKTINFGL 751 Query: 765 IYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLY 824 IYGM A LA++L I +A+ ++ YFER G+ E+ E A A++ G+V TL GRR Sbjct: 752 IYGMGAQKLAQELKISTTQAKDFIARYFERLQGLKEFYEGVEASARKHGFVTTLGGRRRL 811 Query: 825 LPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDEL 884 LPDI S++G A A R AIN +QG+AADIIK AM+AV + + R+++QVHDEL Sbjct: 812 LPDINSASGQAAALARRQAINTVIQGSAADIIKLAMLAVARDERLRELDARLLLQVHDEL 871 Query: 885 VFEVHKDDVDAVAKQIHQLMENCT----RLDVPLLVEVGSGENWDQAH 928 + EV D + + +LM++ L VPLLV+ G+G +W AH Sbjct: 872 LLEVPADAAEEAGALVARLMQDVCPAGKELSVPLLVDWGTGHDWGAAH 919 >UniRef50_C5CBM1 DNA polymerase I n=2 Tax=Micrococcus luteus NCTC 2665 RepID=C5CBM1_MICLC Length = 937 Score = 826 bits (2135), Expect = 0.0, Method: Composition-based stats. Identities = 321/951 (33%), Positives = 485/951 (50%), Gaps = 58/951 (6%) Query: 8 PLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 L+++DG S +RA++A P G+ T A+YG ML ++I Q +PTH AV FD Sbjct: 12 RLLVLDGHSMAFRAFYALPAENFATDTGQHTNAVYGFTAMLLTMIRQQRPTHVAVAFDLS 71 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 G TFR E + YK+ R P + QIE +++A+G+P L + G EADD++ TL+ A Sbjct: 72 GPTFRSEEYAEYKAGRSETPAEFAGQIELTVKVMEALGIPTLTLEGYEADDIVATLSARA 131 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI----LGPEEVVNKYGVPPELIIDFLA 181 E+AG ++ +GD+D QL++ T++ + + V+ KYGV P + A Sbjct: 132 EEAGWEAVVVSGDRDAFQLISERTTVLYPKKGVSDIPPMDADAVLAKYGVAPAQYPELAA 191 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 L+G+++DN+PGVPGVG A L+ G LD + A +I G L ++ E Sbjct: 192 LVGEAADNLPGVPGVGPGFAAKWLKQYGDLDGVLAHAHEITG-------KKGEALREHLE 244 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 + +L + D++L + E + ++ P E + LF +F R V + + Sbjct: 245 DVRRNRRLNALVRDLDLPIGLEAMRLEMPEREPVEELFDALQFNRIRERV---FEVFGER 301 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 A P E A E E T E+ A+ D E +L Sbjct: 302 VGEDAPPPEVEAAPEFTEATTA------------EDVRAFLAAEAGTLLGVHVDVEGPAL 349 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 V +F GVA A ++ + ++ L + K +L Sbjct: 350 LPRRKVPVPGTFGTPVGVALVGEHAGLHVTLDGDAPDPALVAAVREALGEGGLAKAVHDL 409 Query: 422 KYDRGILAN----YGI----ELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITF 473 K LA G+ L G+ D +L +Y++ +++LAE L H + Sbjct: 410 KRTLKALAAPTEGDGLGPDAALDGVVDDVLLSAYLIQPDRRDTSLEALAEAHL-HTPLAA 468 Query: 474 EEIAGKGKNQLTFN------QIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFE 527 + + Q TF+ A A V +L + P + +G + + Sbjct: 469 PREPAQQRAQGTFDLDGGQAAADRAARAADAVRAAWVVRRLSTQFTPQVL-DRGAQRLLQ 527 Query: 528 NIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAH-----EIAGEEFNLSS 582 +E+PL +L+R+E G+ +D L + E+ T ++ A E G + NL S Sbjct: 528 ELEIPLSRLLARMELAGIAVDVDALTDLREDFTAAADAAKESAWASVAEETGGMQVNLGS 587 Query: 583 TKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEEL--ALDYPLPKVILEYRGLAKLKSTY 640 KQLQ +LFE+ + +KT G ST + L++L +P + ++ +R KL+ T Sbjct: 588 PKQLQEVLFERLNMPRTRKTKTGY-STDVDSLQDLLEQTRHPFLENLMAHRDATKLRQT- 645 Query: 641 TDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE--- 697 + L + P R+HT+Y Q ATGRLSS PNLQNIPVR E GRRIR+ F+A E Sbjct: 646 VEGLLETVAPDD-RIHTTYSQTAAATGRLSSLHPNLQNIPVRTEAGRRIREVFVADEVAG 704 Query: 698 -DYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRS 756 V++SADYSQIE+RIMAHLS D+GL+ AF EG+D+H ++VFG+ + VT+EQR Sbjct: 705 EQAVLLSADYSQIEMRIMAHLSEDEGLIQAFREGEDLHSFVGSQVFGVDPDEVTAEQRAK 764 Query: 757 AKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVE 816 KA+++GL YG+S+FGL++QL I EA+ M YF+R+ GV +Y+ AQA++ GY Sbjct: 765 VKAMSYGLAYGLSSFGLSKQLKISVDEARGLMKGYFDRFGGVRDYLRDVVAQARQDGYTS 824 Query: 817 TLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRM 876 T++GRR YLPD+ S N R AERAA+NAP+QG+AADIIKRAM+ V A L+ R+ Sbjct: 825 TIEGRRRYLPDLSSDNRQLRDMAERAALNAPIQGSAADIIKRAMLDVQAGLEEHGLASRL 884 Query: 877 IMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 ++QVHDEL+ EV +++ + + M L VPL V VG G +W A Sbjct: 885 LLQVHDELILEVPAAELEQATALLEERMGRAAELSVPLDVHVGRGRSWHDA 935 >UniRef50_C0E901 Putative uncharacterized protein (Fragment) n=2 Tax=Clostridiales RepID=C0E901_9CLOT Length = 890 Score = 825 bits (2132), Expect = 0.0, Method: Composition-based stats. Identities = 304/922 (32%), Positives = 474/922 (51%), Gaps = 77/922 (8%) Query: 8 PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 ++ VDG+S L R+Y+ L+NS G PT A++G N++ +I + +P AV FD Sbjct: 42 KVLAVDGNSILNRSYYGVRNLSNSKGVPTNAVFGFFNVMDKMIKEVEPDCVAVAFDLSAP 101 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 TFR + ++ YK+ R MP++L Q+ +++ G ++ G EADD++GT AR + Sbjct: 102 TFRHKQYDGYKAGRKGMPEELAVQLPITKELIQLFGYHIVECEGFEADDIMGTFARLCRE 161 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTNT--ILGPEEVVNKYGVPPELIIDFLALMGD 185 +I+TGD+D QLV +T+ + +++V +YGV P +I+ ALMGD Sbjct: 162 QKAECVIATGDRDNLQLVGDGVTVRLATNKEAILFDTDKIVQEYGVTPPELIEVKALMGD 221 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 SSDNIPGV G+GEKTA +L+ + + +++ + A +E+A + Sbjct: 222 SSDNIPGVKGIGEKTALSLVSKYHSVSYILDHAQELDATTRVKNLLSAEG---ARELAEM 278 Query: 246 SYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPA 305 S L TI + ++ V L +F + E K++ + G +PA Sbjct: 279 SRMLGTIVDNAPIDGDLSHYAVGPRDDAGLYRIFSELELKKFLER-----YHLQPGNEPA 333 Query: 306 AKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNIS 365 P++ + T+L + + + + F +E L N+ Sbjct: 334 PAPEKQP---------------KKHFTVLQNPSAEQIREQFGDSVDF-LYSEGLLLLNLG 377 Query: 366 ANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDR 425 +V +F A + L+ K K Sbjct: 378 DTIVEYNF--------------------------DAESAFQALVLQNDRPKRTHGAKELY 411 Query: 426 GILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLT 485 G +L + F T L +Y+L+++A + + L E++L Sbjct: 412 KRCFENGEQLTNLVFSTDLAAYLLDALAKGYALGGLIEKYLP-----------------D 454 Query: 486 FNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGV 545 F E AA A + +L ++ +IE+PL VL+ +E G Sbjct: 455 FRCDVEERYKEIAAFPALC-----DALSKEL-TEWEMGSLLHDIELPLSEVLANMENEGF 508 Query: 546 KIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGG 605 ++D + E L + + + ++ + AGEEFN++ST++L ILF+K G+ KKT G Sbjct: 509 QVDVAGVRTFGEMLQVEIERITQEIYGYAGEEFNINSTRELGAILFDKLGLPTGKKTKTG 568 Query: 606 APSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTA 665 ST+ +VLE+L +P+ ++LEYR L KL STY L + P RVH+ + Q T Sbjct: 569 Y-STNVDVLEKLIPKHPIAGLVLEYRKLTKLSSTYVTGLLKVTGP-DQRVHSVFRQTETR 626 Query: 666 TGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLT 725 TGR+SST+PN+QNIP+R E G ++R+ F+A V++ ADYSQIELRI+AH+S D ++T Sbjct: 627 TGRISSTEPNMQNIPIRTELGSQMRKFFVAKPGCVLLDADYSQIELRILAHISNDSRMIT 686 Query: 726 AFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQ 785 AF EG DIH ATA++VFG+P E + +E RR AKAINFG++YG+ A+ L++ +N+ EA+ Sbjct: 687 AFREGADIHTATASQVFGVPAEVLPAELRRRAKAINFGIVYGIGAYSLSQDINVSVAEAK 746 Query: 786 KYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAIN 845 +Y++ Y Y GV +YM + + GYV+T+ GR +LP+I SSN +A ER A+N Sbjct: 747 EYIENYLHTYSGVRQYMNDIVESSAKSGYVKTMFGRVRHLPEITSSNHNTKAFGERVALN 806 Query: 846 APMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLME 905 P+QGTAADIIK AM+ V L+ E ++I+QVHDEL+ EV K D + + ME Sbjct: 807 TPIQGTAADIIKIAMVKVYRRLKEEGLSAQLILQVHDELLIEVSKADAPRAKVILKEEME 866 Query: 906 NCTRLDVPLLVEVGSGENWDQA 927 + L VPL V+V GENW A Sbjct: 867 HAADLSVPLSVDVSEGENWYDA 888 >UniRef50_C7H3Z2 DNA polymerase I n=2 Tax=Ruminococcaceae RepID=C7H3Z2_9FIRM Length = 859 Score = 825 bits (2132), Expect = 0.0, Method: Composition-based stats. Identities = 307/928 (33%), Positives = 465/928 (50%), Gaps = 84/928 (9%) Query: 8 PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 L+++DG+S RA++ LT G T A++G LN++ SL+ + +P AV FD K Sbjct: 9 RLLVIDGNSIANRAFYGIKLLTTKDGRYTNAIFGFLNIMNSLLRECEPDEVAVAFDLKHP 68 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 TFR E+++ YK R MPD+L Q+ L ++ +G ++ G EADD++GTLA E Sbjct: 69 TFRHEMYDGYKGTRHAMPDELAQQMPILKELLTDLGYRQVSAKGWEADDILGTLAAACEA 128 Query: 128 AGRPVLISTGDKDMAQLVTPNITLI------NTMTNTILGPEEVVNKYGVPPELIIDFLA 181 ++TGD+D QLV+ T++ + + + KYG+ P+ +I+ + Sbjct: 129 RRDDCFLATGDRDSLQLVSETTTVLLATSAMGRSKTETMDLDAIHEKYGIEPKQLIEVKS 188 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGD+SDNIPGV G+GEKTA L++ G LD++Y + S L +E Sbjct: 189 LMGDTSDNIPGVKGIGEKTAMTLVKNFGTLDSVYDHLD-----SPIIKPRQRENLLACRE 243 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 AYLS+ L TI+TD ++ +V + + L ++ E + G Sbjct: 244 DAYLSHTLGTIRTDAPIDTAEGAYKVTEGNKPAAVRLMQELEIQTLITRFGL------DG 297 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 P P D A S +Y+ L A ++ +A +T Sbjct: 298 IVPELDPDTLPEVDAAIASLPAEPS-GHYLVAARPAVLGKKSAVVQPEAWYAV-QDTTVY 355 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 LV LL+D K + Sbjct: 356 PLSEEELV-------------------------------------SLLDDPKVTLDVFDS 378 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 G I +D L +Y+L++ A + + +LA + + EE Sbjct: 379 APLYARAMAAGSWGSSIVWDGKLAAYLLDASASHYLLTTLATSYHARSAFSCEEYP---- 434 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 DA L KM ++ ++ G +++ NIE PL VL+ + Sbjct: 435 -------------------DAGFLADLFAKMKAEITEN-GEDDLYNNIEFPLAQVLADMT 474 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGE-EFNLSSTKQLQTILFEKQGIKPLK 600 R G+ +D + + +L L ++ + AG +FN +S KQL T+LF+ G+ K Sbjct: 475 RTGILVDREGIEAFGVQLRQELDQVLTRIEMEAGTSDFNPNSPKQLGTLLFDTMGLPHGK 534 Query: 601 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 KT G ST E LE+L D PL + IL+YR KL STY + L +I + GR+HT ++ Sbjct: 535 KTKNGW-STDAETLEKLR-DIPLVEDILQYRACQKLNSTYVEGLLKVI-GEDGRIHTRFN 591 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRD 720 Q TGRLSS +PNLQNIP+R E G ++R F+A V+V ADYSQIELRI+AH++ D Sbjct: 592 QTEARTGRLSSDNPNLQNIPIRTEMGSKLRAYFVAKPGCVLVDADYSQIELRILAHVTGD 651 Query: 721 KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 + AF G DIHR+TAA+++ + E VT R SAKAINFG++YG A+ L++ + + Sbjct: 652 AHMQEAFLSGADIHRSTAAKIYNIRPEDVTPRLRSSAKAINFGIMYGKGAYSLSKDIGVS 711 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 KEA+ ++ Y +P + YME+T A A++ GYV TL GRR LP++ S+N RA+ E Sbjct: 712 VKEAEAFLQTYLATFPNIDGYMEKTIADARQCGYVSTLFGRRRALPELNSNNHNIRASGE 771 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 R A N P+QGTAAD+IK AM+ V L+ E+ R+I+ VHDEL+ E + + + A+ + Sbjct: 772 RMARNTPIQGTAADVIKLAMVRVWRRLRNEKMESRLILTVHDELIVEAPEAEAEKAAQIL 831 Query: 901 HQLMENCTRLDVPLLVEVGSGENWDQAH 928 + ME C VPL +V +G+NW +AH Sbjct: 832 REEMEGCVHYAVPLSTDVHTGKNWLEAH 859 >UniRef50_Q14QK7 DNA polymerase I n=1 Tax=Spiroplasma citri RepID=Q14QK7_SPICI Length = 869 Score = 820 bits (2119), Expect = 0.0, Method: Composition-based stats. Identities = 293/930 (31%), Positives = 471/930 (50%), Gaps = 74/930 (7%) Query: 7 NPLILVDGSSYLYRAYHAFPP----LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 ++L+DG+S L+RA++A L + G PT A+Y NML ++ V F Sbjct: 2 KKVLLIDGNSLLFRAFYATAYNGEMLKSLDGTPTNAVYAFTNMLNKILKANNYYSVVVAF 61 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 D K FR +L YK R P++L Q + + + +P L G EADD++G LA Sbjct: 62 DKGKKNFRHDLLVDYKDGRSKTPNELIVQFPIVKEFLDSYQIPYLEQEGYEADDLLGCLA 121 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNT---ILGPEEVVNKYGVPPELIIDF 179 AEK V I + DKD+ QL+T ++ ++ ++ K+G+ P + D Sbjct: 122 MLAEKEDFYVDIFSSDKDLYQLITNKTNILVPRQGDSADVIDEAALIAKWGIKPLQVPDL 181 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 LMGD SDN+ GVP VGEKTA L++ ++ LY E I G + L + Sbjct: 182 KGLMGDPSDNLKGVPKVGEKTAIKLIKEYHSIENLYDNIEHIKG-------ALQQNLLNH 234 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 KE A L ++ATI D+ LE P E L+ + KY + + + Sbjct: 235 KESALLCKKIATIFCDINLEH--FTFTSFSPNHETLMQFYLKYNMNSFVTKLFNNQDNDI 292 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 + + K E ++ T Y+ +LDE Sbjct: 293 QNSNIKVKIIEEWRSEFNENNTTV------YLELLDE----------------------- 323 Query: 360 SLDNISANLVGLSFAIEPGVAA--YIPVAHDYLDAPDQISRERALELLKPLLEDEKALKV 417 + ++ ++G GV YI HD +L L D K K+ Sbjct: 324 --NYHTSEIIGFGIVNSKGVFYFDYIHAKHD--------------KLWHQFLNDNKYQKL 367 Query: 418 GQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIA 477 + K LA I ++ I +D ML Y+ NS A ++ +D+ + K + +T E Sbjct: 368 TYHAKSLIVALARDNIFVQNIEYDMMLAGYVYNSNA-KNSLDTYINLFEKKQILTDEFFY 426 Query: 478 GKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVL 537 GKG + + + G + E A +L K+ L+ ++ +++ NIE+P+ L Sbjct: 427 GKGVKKQIPADVI--KLGHFIGEKASYIHKLRPKIIELLKTNQ-QYDLYHNIELPIAFAL 483 Query: 538 SRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIK 597 +R+E NGVK+D L + + + EL + ++IA +E N +S KQ+ +LF+ + Sbjct: 484 ARMEINGVKVDQYELTTQTLRIEKIVQELNNEINDIAQKEINPNSPKQISELLFQNFSLP 543 Query: 598 PLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHT 657 K ST++E LEE+ ++ + IL+YR KL STY + I G+VHT Sbjct: 544 DRK-----KGSTAQETLEEIKNNHVIIPKILDYRKYQKLYSTYLKGMEKYIFA-DGKVHT 597 Query: 658 SYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFI-APEDYVIVSADYSQIELRIMAH 716 Y Q +T TGRLSS +PN+QNI +R+ + +R+ F+ + D +++S DYSQIELRI+AH Sbjct: 598 IYKQTLTNTGRLSSVEPNMQNISIRDHIQKEVRKIFVVSSPDNILLSCDYSQIELRILAH 657 Query: 717 LSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQ 776 +S+D+ L+ AF +DIH TA ++F L + +T RRSAKA+NFG+IYG+S FGLA Sbjct: 658 MSKDQDLIAAFNNNEDIHTNTAMKIFNLSKDEITPNIRRSAKAVNFGIIYGISDFGLATD 717 Query: 777 LNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARR 836 LNI +A+ ++ Y++++P + ++++ K+ GYV T+ R+ Y+ +I N +R Sbjct: 718 LNISVAKAKAIINNYYQQFPTIKAFIDKQVEFCKQNGYVTTIFNRKRYVSEINDRNYMQR 777 Query: 837 AAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAV 896 +R A+N P+QG+AADIIK A+ +D + ++I Q+HDEL+FE+ + ++ V Sbjct: 778 EFGKRIAMNMPIQGSAADIIKIALKNIDQEFLKLNLKAKIIAQIHDELIFEIPQVELIQV 837 Query: 897 AKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 K + LME+ T+LDV L+V++ +G +W Sbjct: 838 QKIVKILMEDSTKLDVKLIVDMKTGLSWYD 867 >UniRef50_C4FFL7 Putative uncharacterized protein n=2 Tax=Bifidobacterium RepID=C4FFL7_9BIFI Length = 982 Score = 819 bits (2117), Expect = 0.0, Method: Composition-based stats. Identities = 319/990 (32%), Positives = 484/990 (48%), Gaps = 82/990 (8%) Query: 5 PQNPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 + L++VDG S +RA+ A P + S+G+ T A++G ML +I KP H AV F Sbjct: 9 TRGTLLVVDGHSLAFRAFFALPVENFSTSSGQATNAVWGFATMLAQVIDAEKPDHLAVAF 68 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 D KG TFR+ + YK R P+DL +Q+ + +M+ A+G+ + G E DDVIGTLA Sbjct: 69 DVKGGTFRNTMLPQYKGTRDAAPEDLLSQLPLIQSMLDALGVTYIEKPGYEGDDVIGTLA 128 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIID 178 E+A L+ +GD+D QLV +T++ + + PE V KY V P D Sbjct: 129 TMGEQAKYKTLVLSGDRDAFQLVDDWVTVLYPGHHFKDLKHMTPEAVFAKYKVTPAQYPD 188 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 AL G+++DNIPGVPGVG+ A + G L+ + ++I G L + Sbjct: 189 LAALRGETADNIPGVPGVGDGFAAKWINQYGSLEGICEHADEIGG-------KKGESLRE 241 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 N + L+ ++ + D++L +T + L A ++ LF EF T + L+ Sbjct: 242 NLDQVKLNRKVNALVRDIDLGVTVDDLTFGHFDAAKIDELFTSLEFGSRTK----TRILK 297 Query: 299 AKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTET 358 A K ++ + A+ E +A +S Y D +TL AW+ P + + Sbjct: 298 TFNGGEAPKLEQNAKAEAGKERSAIEVSDVQYAG--DADTLNAWVEHNLPKPDASGASVN 355 Query: 359 DSLD---------------------------------NISANLVGLSFAIEPGVAAYIPV 385 D D + AN + L + + IP Sbjct: 356 DESDDTGTQFTIDHSMQCNGIIERSWVINAAGNAKPGKVKANAITLQYG-GSALIIEIPA 414 Query: 386 AHDYLDAPDQISRERAL----------------ELLKPLLEDEKALKVGQNLKYDRGILA 429 D Q A + L +L V K + A Sbjct: 415 VDSADDTGKQTDAATADATDAATDAPRLDPGMRDALNVILAQYAPTLVVHGYKEQLHLFA 474 Query: 430 NYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQI 489 + G++L FDT L Y++ ++ A R+L E A +G L Sbjct: 475 SLGVDLPKPLFDTKLAGYLVQPDFHADTLEQAAARFLDIHVEEKTEEATQGLLDLDDGAD 534 Query: 490 ALEEAGRYAA--EDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKI 547 A + + + + A + +L + P + + + + + +E+P+ VL +E G K+ Sbjct: 535 ADADGNQTSTLLQHAAIIAELARALAPQIDQRE-QFGLLQRMELPVSHVLYGMESQGAKV 593 Query: 548 DPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAP 607 D + L + + + ++ A + AG NL S KQL +LFE G+KP K+T G Sbjct: 594 DMQRLTSMRDTFAADARQAQEIAWDYAGTTVNLQSPKQLGKVLFEDMGLKPTKRTKTGGY 653 Query: 608 STSEEVLEELALDYP-------LPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 +T+ + L++L Y +L +R KLK L NP R+HT++ Sbjct: 654 TTNADALQKLYFTYADDERASGFLGALLRHRETNKLKQI-VATLIDATNPADERIHTTFE 712 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYV-IVSADYSQIELRIMAHLSR 719 Q V ATGRLSS DPNLQNIP RN GR IR AF+ E + ++S DYSQ+ELRIMAHLS Sbjct: 713 QTVAATGRLSSVDPNLQNIPNRNAAGREIRSAFVPGEGFESLMSCDYSQVELRIMAHLSG 772 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 D+ L+ AF G D H+ A+ V G+P++ +T +QR KA+++GL YG+S++GLA+QL I Sbjct: 773 DESLIEAFKSGADFHKYVASLVHGVPVDQITPDQRSHVKAMSYGLAYGLSSYGLAQQLKI 832 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 EA+ YF + V +++E ++A+++GY ET+ GRR Y P +KS+N A R AA Sbjct: 833 RPSEAEALKAKYFATFGKVHDFLESCVSEARKRGYTETMFGRRRYFPALKSTNRAARDAA 892 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 ERAA+NAP+QG+AADI+K AMI L + R+I+Q+HDELV E+ + + V+ Sbjct: 893 ERAALNAPIQGSAADIMKIAMIRARRALAEAGMKSRIILQIHDELVVEIAPGEREQVSAL 952 Query: 900 IHQLMENCTRLDVPLLVEVGSGENW-DQAH 928 + MEN LDVPL V G G +W AH Sbjct: 953 VRDAMENAVHLDVPLDVSTGVGADWQLAAH 982 >UniRef50_C6C0R6 DNA polymerase I n=3 Tax=Desulfovibrio RepID=C6C0R6_DESAD Length = 904 Score = 819 bits (2117), Expect = 0.0, Method: Composition-based stats. Identities = 318/932 (34%), Positives = 492/932 (52%), Gaps = 49/932 (5%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 +PL L+DGS++ YR +HA+P L S G PT AM+ VL L +I + KP + + D KG Sbjct: 12 DPLYLIDGSAFFYRGFHAYPDLKRSDGVPTNAMFFVLRTLLKVIKEEKPKYLVFILDGKG 71 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 K FR EL++ YK+ RPPMPDDLR+QIEPL + +G+PL+ G EADD I +LA Sbjct: 72 KNFRHELYDQYKAQRPPMPDDLRSQIEPLKEALNVIGVPLIVSEGEEADDCIASLAARY- 130 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINT--MTNTILGPEEVVNKYGVPPELIIDFLALMG 184 K+ RPV+I DKD+ Q + N+ + + I + + PE DF AL+G Sbjct: 131 KSERPVVILGADKDLKQCLDENVFMWDPAGKKEKITSLADFREDTKLEPEQWADFQALVG 190 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 DS+DNIPGVPGVG+ TA ++ L+ + +K+ + K++ E + Sbjct: 191 DSADNIPGVPGVGKVTATKIMAEYPTLEDIRDNYDKLK-------PAIQKKMKDELENIF 243 Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304 + +L ++ + +Q E++ + YEF+ DV++ + P Sbjct: 244 VYRELTRMRLGSCSDCDLKQCELRSVDGDRAAEFMTTYEFRSLVRDVKSLFSATSGSGVP 303 Query: 305 AAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFD-------TE 357 A ++++ + S + + AP + + Sbjct: 304 AGNSKKSASGQASLFGEEDTTSAAKPKKSASGGGQFSLFGEATPAPAAPENRLELKKISS 363 Query: 358 TDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKV 417 L + + VGL + G +I V D++ + L L+ K + V Sbjct: 364 ASELPDFTDKEVGL---VREGNIFFIGVD------GDELMCKVTAAELAAGLQSAKTIVV 414 Query: 418 GQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSL-AERWLKHKTITFEEI 476 ++K +G FD L +Y+LN + D L A + + Sbjct: 415 A-DVKSFLRADDAWGQIQLFRWFDLSLAAYLLNPEERNYAWDRLRAMLFAGEELPD---- 469 Query: 477 AGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPV 536 +++ + G L L + P + K G + N+E+PL+PV Sbjct: 470 --------AVDEVHPDAQG-------MAALALMHVLGPRI-KSAGLDELTANLEIPLIPV 513 Query: 537 LSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGI 596 L+ +E+ G+ ID + E+ R+ EL + HE AGE FN+ S++Q+ T+LF+ G+ Sbjct: 514 LADMEKAGITIDLDAFADFLTEVNERINELTRVIHERAGEPFNIRSSQQMATVLFDSLGL 573 Query: 597 KPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVH 656 KP KTP GA ST+ VLE+L+ + + ILEYR + KL+STY + LP ++N GR+H Sbjct: 574 KPGGKTPKGALSTANSVLEKLSGQHEIITDILEYRKMEKLRSTYLEPLPKLVNA-NGRIH 632 Query: 657 TSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAH 716 T+++Q TATGRLSS+ PNLQNIP+R ++G+R+R F A E + +ADYSQ+ELR++AH Sbjct: 633 TNFNQLATATGRLSSSGPNLQNIPIRGDQGKRMRACFTAGEGLRLAAADYSQVELRVLAH 692 Query: 717 LSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQ 776 S D L++AF +DIH TAA +F VTS++RR+AK INFGLIYGM L+R+ Sbjct: 693 FSGDPALVSAFEHDEDIHSRTAALLFDRDPADVTSDERRNAKTINFGLIYGMGPQKLSRE 752 Query: 777 LNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARR 836 L I EA++++ YFE+ + E+ + Q +E+GYV TL GRR LP++ S++ Sbjct: 753 LGIKINEAKEFIAKYFEKLDVLKEFYDSVVEQGREKGYVTTLSGRRRLLPELHSTSPQIL 812 Query: 837 AAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAV 896 + A R AIN +QG+AADIIK AMI V + + R+I+Q+HDEL+ E +++++ + Sbjct: 813 SQARRQAINTVIQGSAADIIKMAMIKVADNAEIKHLGGRLILQIHDELLVEGPEENIEEI 872 Query: 897 AKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 K + + M+ L VPL V++G G NW QAH Sbjct: 873 GKLLQKDMQTVATLAVPLKVDLGLGRNWAQAH 904 >UniRef50_Q252Y8 DNA polymerase I n=14 Tax=Chlamydiaceae RepID=Q252Y8_CHLFF Length = 869 Score = 818 bits (2114), Expect = 0.0, Method: Composition-based stats. Identities = 319/926 (34%), Positives = 489/926 (52%), Gaps = 65/926 (7%) Query: 8 PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG- 66 + ++D S +++RAY A P + NS+G+ T A++G + + LI ++ P H VFD Sbjct: 3 KIFILDASGFVFRAYFALPDMKNSSGKGTQAVFGFIRSINKLIKEFSPNHMVAVFDGPNN 62 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 K R E++ YKS+R +DL QI + +GL L V GVEADDVI ++++ A Sbjct: 63 KQSRREIYADYKSNREKKEEDLYQQIPVVKEYCNLLGLSHLEVEGVEADDVIASVSKLAI 122 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNTI-LGPEEVVNKYGVPPELIIDFLALMGD 185 G V I T DKD+ QLV+PN+ +IN + + VVN YGVPP I D+LAL+GD Sbjct: 123 AEGYEVCICTADKDLLQLVSPNVVVINPWKDQPPIDENGVVNIYGVPPCRIPDYLALVGD 182 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 +SDNIPGV G G K A ALLQ ++ + +++ G + + + K++ L Sbjct: 183 TSDNIPGVSGCGPKKAAALLQKYHSVEGILEHLDELTGSTHK-------MFSEQKDILLL 235 Query: 246 SYQLATIKTDVELELTCEQLE--VQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAK 303 S LA + +V L + LE + + EE+ + + FK VE + + Sbjct: 236 SKDLAVLNNNVPLPTEIKDLEFPMHEIRQEEMNAFYMRQGFKTLVQQVEEASNVYVE--- 292 Query: 304 PAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDN 363 V E ++ K F+ + L + Sbjct: 293 ---------------------------VINNSENLIEVLPTLHGKKVPFSVGYKGSFLPS 325 Query: 364 ISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKY 423 +S L+G++ A + V Y+ V + + + ++ LK + G N+K Sbjct: 326 LS--LMGVALACDDSV-YYVDVEN---------ATDDVIKPLKDFFGRKDTEFYGYNIKR 373 Query: 424 DRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQ 483 D L N GI + IA D L +++N A LA+ L + GK Q Sbjct: 374 DSHALKNAGIHVNNIALDLALAEHLINGGAKISYQTLLADLGLVSSAGRY----GKEWGQ 429 Query: 484 LTFN-QIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 L+ Q + +Y E + + +L K K ++F N+EMPL VL IER Sbjct: 430 LSLPIQKSPPNPAQYFGEFVSHLPTIKETLLKEL-KSKNIEDIFFNMEMPLEKVLFTIER 488 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 NG+ +D + L N + L+ LA L + +AG FN+ S KQL +L+ K G+ P+ Sbjct: 489 NGMPLDVEDLQNLEKILSEELAILADDIYALAGSPFNIKSPKQLAEVLYNKLGLTPVD-- 546 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 A ST EVLE + ++ + + IL +R + KL STY LP ++P T R+H +++Q Sbjct: 547 --KARSTKAEVLEAMTGEHDVIEKILAFRSVEKLLSTYVRALPKQVDPCTFRIHPTFNQM 604 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFI-APEDYVIVSADYSQIELRIMAHLSRDK 721 T TGRL+ DPNLQNIP+R+E GR +R+AF ++ +SADYSQIELR +AHLS+D+ Sbjct: 605 GTVTGRLACQDPNLQNIPIRSERGRLLRKAFCDTHQNTYFLSADYSQIELRFLAHLSQDE 664 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 L AF +D+H TA++VF +PLE VT +QR AK +NFG+IYG A+GL++ L I Sbjct: 665 SLKLAFESREDVHTFTASQVFHVPLEKVTKQQRMQAKTVNFGIIYGQQAYGLSKILKISV 724 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 EAQK +D YF+RYP V ++ T +QA E V+TL GR + + + RAA+ R Sbjct: 725 SEAQKLIDAYFDRYPDVARFINETVSQACENLRVKTLLGRERIIDN-WTEFSNSRAASGR 783 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 A+N +QG+AA++IK AM+ + L+ + R RM++Q+HDEL+FEV +++ + + + Sbjct: 784 LAVNTRIQGSAAELIKLAMLQLSDALEKRKLRSRMLLQIHDELIFEVPEEEKEEMQTLVR 843 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQA 927 +ME+ L VPL+V + G+NW + Sbjct: 844 DIMESAMILSVPLVVNILIGKNWAEC 869 >UniRef50_Q30VQ3 DNA polymerase I n=7 Tax=Desulfovibrionales RepID=Q30VQ3_DESDG Length = 931 Score = 814 bits (2102), Expect = 0.0, Method: Composition-based stats. Identities = 305/931 (32%), Positives = 465/931 (49%), Gaps = 80/931 (8%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + + P+ L+DGS++++R ++AF + S G PT A++ VL +L L+ + +P +AA D Sbjct: 75 LDKEPVYLIDGSAFIFRGFYAFQNMQRSDGLPTNALFIVLRILLKLLREEQPAYAAFFMD 134 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 KG TFR L++ YK++R P+ L Q++P+ V+++G+PL G EADD I +LA Sbjct: 135 GKGPTFRHALYDQYKANRSATPEPLVQQLDPIRRGVRSLGIPLEVSDGCEADDCIASLAA 194 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINT--MTNTILGPEEVVNKYGVPPELIIDFLA 181 + K+ RPV+I DKD+ Q + N+ L + +L + G+ P DF A Sbjct: 195 KF-KSERPVIIVGADKDLKQCIDDNVYLWDPGAKQEKLLDLAGFTEETGLSPSQWPDFQA 253 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 ++GDSSDNIPGVPGVG KTA + L+ + + + + K + Sbjct: 254 VIGDSSDNIPGVPGVGPKTAAQIFAEFPTLEAIQENEKALK-------PGVQKKFAGQWD 306 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 YL +L T+ T L + + VQ A+ +++E + ++ ++ Sbjct: 307 NIYLYRRLTTLDTGRCTSLALKDMTVQSVDADNAAAFLREFELRTLLRELPQSVPVRPAR 366 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 + AA Q + + S + L A + P Sbjct: 367 SGAAAMQQASLFGEPQAAPQIPSFS--------SADQLPAVSGTVALVPAEK-------- 410 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 G++ A Y D Q + + + D KAL Sbjct: 411 --------GIAVAFNGNEYLYTGKPEDLAAHMAQTG-----AISRIIAPDVKALYRSHT- 456 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 + IE+ FD L +Y+LN + SLA R Sbjct: 457 -------SWRAIEV-HRWFDLGLAAYLLNPEERDYSWTSLARR----------------A 492 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 + + A+DA L + G + E +EMPL+PVL+ +E Sbjct: 493 EEFGIDAQTPATLALTLAQDAAARL-----------EGVGLSALMEELEMPLIPVLADME 541 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 G++I+ E+ L L ++ + +AG +FN+ S++QL +LF G+K K Sbjct: 542 LRGIRINRAEFSGFLAEVQKELDRLTQEVYAVAGGQFNIRSSQQLGELLFGTLGLKAGSK 601 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 T GG STS+ VLE+LA +P+ ILEYR L KL+STY + LP + R+HT+++Q Sbjct: 602 TKGGQASTSQAVLEKLAGKHPVIDTILEYRKLEKLRSTYLEPLPRLAQEND-RIHTTFNQ 660 Query: 662 AVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDK 721 TATGRLSS+ PNLQNIPVR G+R+R+ F A +V+ADYSQIELR++AH+S D Sbjct: 661 LATATGRLSSSQPNLQNIPVRGPMGQRMRRCFTAAPGNKLVAADYSQIELRVLAHVSADP 720 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 L+ +F +DIH TA ++ + VT +QRR+AK INFGLIYGM LA++L + Sbjct: 721 TLIESFTRNEDIHSRTAGLLYDVTAADVTPDQRRNAKTINFGLIYGMGPQKLAQELKVTL 780 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 EA+++++ YF + + E+ + A+E G+V TL GRR LP+I S N R+ A R Sbjct: 781 NEAKEFIERYFSKLSHLKEFYDNVEQSAREHGFVTTLAGRRRLLPEIHSDNNQLRSQARR 840 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 AIN +QG+AADIIK AM+ A +Q +I+QVHDEL+ E +D +A AK++ Sbjct: 841 QAINTVVQGSAADIIKIAMLKAAADETLQQLNAALILQVHDELLLEAPQDAAEAAAKRLA 900 Query: 902 QLMENC----TRLDVPLLVEVGSGENWDQAH 928 +M + LDVPL V+ G G+NW QAH Sbjct: 901 DIMSSVRPGGAALDVPLAVDYGIGDNWGQAH 931 >UniRef50_Q2GI23 DNA polymerase I n=6 Tax=Rickettsiales RepID=Q2GI23_EHRCR Length = 944 Score = 812 bits (2097), Expect = 0.0, Method: Composition-based stats. Identities = 336/979 (34%), Positives = 499/979 (50%), Gaps = 106/979 (10%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 ++D L+RAY+A P L S G P G +YG +N+ I ++ + VVFD K Sbjct: 4 FTIIDAYGLLFRAYYALPNLRTSYGLPIGGVYGFINIFLKYIEKHVTDYLVVVFDTGSKN 63 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK- 127 FR ++ YK +RP +PDDL Q L V A + V G EADDVI TL+++ K Sbjct: 64 FRHNIYPEYKGNRPKLPDDLIPQFSLLREAVNAFNIASEEVVGYEADDVIATLSKKYCKL 123 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSS 187 G V + T DKD+ QL+ NI + + + N + E+V +K+G+ ++DFL+L GD+S Sbjct: 124 QGVKVTVVTSDKDLLQLLKYNICIFDPIKNKYIEEEDVQSKFGISSNQLLDFLSLTGDAS 183 Query: 188 DNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSY 247 DN+PG+PG+G KTA LL G LD L ++ R + Q + A LS Sbjct: 184 DNVPGIPGIGVKTAAKLLNDFGSLDNLLLHVHEVKTNKCR------ESITQYSDQAILSR 237 Query: 248 QLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAK 307 QL T+ +V++ E+ Q +EL+ KKYE + V+ G +A Sbjct: 238 QLVTLCDEVDICGDIEKYSFQISGIQELVEFLKKYELQSLMNKVD---KFFKVGNASSAV 294 Query: 308 PQETSVADEA--------PEVTATVISYDNYVTILDEE---------------------- 337 Q TS +D+ E +++ D + + + Sbjct: 295 NQNTSSSDKTMGGDKVIHHEPQSSMNEVDKFFKVGNASSAVNQNASSSDKTMGGDKVIHH 354 Query: 338 TLKAWIAKLEK----------------------APVFAFDTETDSL-----DNISANLVG 370 L++ + K++K T+SL + ++ Sbjct: 355 ELQSSMNKVDKFFEVGNTSSTVNQNASSSDKTMGGSEVIHYSTESLKVFLENCKGEGIMA 414 Query: 371 LSFAIEPGVAAYIPVAH--DYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGIL 428 + V + +++ D L D+ ALEL+KP+L LKV ++K ++ Sbjct: 415 FYMEMADNVIDSVSLSYKDDILLYIDKDHVTDALELIKPVLGLNYVLKVIYDVKTLLKVI 474 Query: 429 ANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQ 488 + I D M+ SYIL+ H + + +K + + Sbjct: 475 PDVEIV---AFDDIMIMSYILSPSVHDHSLQEIINYNVKQDVVNVK-------------- 517 Query: 489 IALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKID 548 +TL L K+ ++E +E PL+ VL +E+ G+ ID Sbjct: 518 -------------TAITLLLLHKLLKKNLFVNQLYTIYERVEKPLIRVLDSMEKVGMLID 564 Query: 549 PKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPS 608 +L S + +++ LE + + +AG EFN++S+KQL T+LF+K GIK KK G+ S Sbjct: 565 IDILKTLSSTFSEKVSVLENEIYRLAGTEFNIASSKQLGTVLFDKMGIKKSKKLSSGSYS 624 Query: 609 TSEEVLEELA-LDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATG 667 T EVL +L + + IL++R KLKSTYTD L IN +GR+HT Y TATG Sbjct: 625 TDAEVLNDLVFNEIEIADKILQWRHFTKLKSTYTDALGKQINSNSGRIHTFYSMISTATG 684 Query: 668 RLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAF 727 RLSS++PNLQNIP+R+EEG IR+AF+A + Y +VSADYSQIELRIMAH++ + AF Sbjct: 685 RLSSSNPNLQNIPIRSEEGNAIRRAFVARKGYKLVSADYSQIELRIMAHIAGVQAFKDAF 744 Query: 728 AEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKY 787 +DIH TA ++F +++ RR AK+INFG+IYGMSAFGLA+QL I R EA Y Sbjct: 745 FLDQDIHSITAEQIF--CTQSLDKNLRRKAKSINFGIIYGMSAFGLAKQLGISRSEANAY 802 Query: 788 MDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAP 847 +D YF+ YP + YM + AK GY T+ GR+ ++ DI SSN A R +ERAAINAP Sbjct: 803 IDNYFKSYPEIQSYMNNIKIYAKTYGYTRTIFGRKCFIRDINSSNAAARNFSERAAINAP 862 Query: 848 MQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENC 907 +QGT+ADIIK +MI + + +I+QVHDEL+FE+ ++ VD + I ++ME Sbjct: 863 LQGTSADIIKMSMIHLFDKITHGS----LILQVHDELLFEILEEYVDYAVEVITKVMEGI 918 Query: 908 TRLDVPLLVEVGSGENWDQ 926 +L VPL V++ G NW Sbjct: 919 VKLSVPLKVDIRIGTNWAD 937 >UniRef50_D2VA69 DNA polymerase I n=1 Tax=Naegleria gruberi RepID=D2VA69_NAEGR Length = 1085 Score = 811 bits (2095), Expect = 0.0, Method: Composition-based stats. Identities = 341/995 (34%), Positives = 528/995 (53%), Gaps = 82/995 (8%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 + ++LVDG+ + RAY PPLT+S G PT A+ L +++ + H A+ FD+ Sbjct: 93 EKKILLVDGTPLVVRAYFGTPPLTSSNGTPTNAILTFAKSLIAILKSDEFDHVAIFFDSG 152 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 + R + YK++R P D+L+ Q + + MGL +++ G EADD+I T+AR+A Sbjct: 153 KPSIRKSISSDYKANRKPTEDNLKKQFPICKLLAEKMGLKVISKDGFEADDLIATVARQA 212 Query: 126 E-KAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMG 184 + + +++ + DKD+ L N+TL++ MT L ++++ KY +PP+LI +FLAL+G Sbjct: 213 KDEKFNSIVVVSSDKDLHCLSDTNLTLLDPMTKKKLTMDDIIGKYELPPKLIPEFLALVG 272 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 D++DNI GV G+G+K A +LL+ G + + + K ++ N + Sbjct: 273 DTADNIKGVKGIGKKKAVSLLEQYGSISEILNNLDD-----ENMEKKSREAIKSNIDDLK 327 Query: 245 LSYQLATIKTDVELELTCEQLEVQQP-----AAEELLGLFKKYEFKRWTADVEAGKWLQA 299 LS +L + +V L+ + + +V Q EEL+ + + E ++ + Sbjct: 328 LSLRLVALDEEVPLDYSLQDFQVDQSSLDFSQNEELIKMLEDLEINSVIKQLKKETDKKE 387 Query: 300 KGA----------KPAAKPQETSVADEAP---------EVTATVISYDNYVTILDEETLK 340 K + +E S AD A ++ Y IL+E+ L Sbjct: 388 KTTKSKSKKKEVIESVVLSEEMSSADVASLKLSHVSDDSKIGKIVKASEYNIILNEKELD 447 Query: 341 AWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPV----AHDYLDAPDQI 396 ++I +++ + F TE L + + G+SF I PG A Y+P ++LD+ + + Sbjct: 448 SFIEQVKISGNVCFSTEICLLSLHNPVMAGISFCISPGQAYYLPFFKGGKVEFLDSVNIL 507 Query: 397 SRERALELLK-PLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGR 455 L ++ ++E+ LK+G N+KY +LANYG+ ++ D M+ SY+LN Sbjct: 508 KESPILSKVRTEIMENPNILKIGHNIKYHIKMLANYGVTVKNF-DDIMVMSYVLNCGKHG 566 Query: 456 HDMDSLAERWL----KHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLK 511 H+MD + E L K I +E+ G GK ++T + + +A + AD+T Q + Sbjct: 567 HEMDEIVENVLLLDPKEHIIPEKEVLGIGKKKVTLMEADIVSVVHFACQHADLTKQAYDV 626 Query: 512 MWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAH 571 + L K +E IE PLV L+ IE GV +D L E ++ + K Sbjct: 627 LKSALDKSPKLTQFYEGIEKPLVETLAGIEMKGVFMDEPALVKMENEYREKIKAIGNKIR 686 Query: 572 EIAG--------------------------------EEFNLSSTKQLQTILFEKQG--IK 597 E AG EEFN++S +QL ++FEK G K Sbjct: 687 EDAGYPTIDEDIEIPTSEEEIESMIIEMDEMKQEASEEFNINSNRQLGQVIFEKLGIGTK 746 Query: 598 PLKKTPGGAPSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVH 656 KKT G + EVL++LA + + + K ILEYR L KL STY L INP T R+H Sbjct: 747 LRKKTKVGDYILNAEVLQKLAAEGHSIAKHILEYRALTKLYSTYISGLRQHINPYTKRIH 806 Query: 657 TSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQIELRIMA 715 T++ A+T TGRLSS PN+QNIPVR EG++IR+ FI+P +DYVI+ DYSQ+ELRI+A Sbjct: 807 TTFQNALTVTGRLSSVMPNIQNIPVRTAEGKQIRRCFISPSDDYVIMKVDYSQVELRILA 866 Query: 716 HLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLAR 775 H++ L AF E KD+H TA++VF +PL+ V R AKAINFG+IYGMS FGL++ Sbjct: 867 HIANIPVLKNAFKENKDVHAITASQVFNVPLDQVDKSTRNKAKAINFGIIYGMSEFGLSK 926 Query: 776 QLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSN-GA 834 ++ + + A+ +++ YF++YPG+ YM +T ++ GYV TL RR ++P I+ G Sbjct: 927 RIGVDTQAAKSFIEQYFKQYPGIKNYMTKTIEFCRKHGYVNTLFNRRCWIPGIEDQGFGG 986 Query: 835 RRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVD 894 + + ER +IN P+QGT+ADI K AM ++ Q + R RMI+QVHDE+VFEV KD+V+ Sbjct: 987 KSSFGERTSINTPIQGTSADITKIAMNSLHKAFQEKGLRTRMIIQVHDEIVFEVPKDEVE 1046 Query: 895 AVAKQIHQLMENCT-----RLDVPLLVEVGSGENW 924 V I +LME VPL VE W Sbjct: 1047 TVEPIIKELMEGAAFFGGTNFTVPLTVEATVDSKW 1081 >UniRef50_A5TW64 DNA-directed DNA polymerase I n=10 Tax=Fusobacterium RepID=A5TW64_FUSNP Length = 914 Score = 810 bits (2093), Expect = 0.0, Method: Composition-based stats. Identities = 331/943 (35%), Positives = 516/943 (54%), Gaps = 53/943 (5%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 +L+D S+ +YRAY A EPTGA+YG +N L S+I ++KP + A FD K Sbjct: 2 KKAVLLDVSAIMYRAYFANMNFRTKN-EPTGAVYGFINTLLSIINEFKPDYMAAAFDVKR 60 Query: 67 KT-FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 + R E++ YKS+R P+DL QI + ++ A + + G EADDV+G+LA++ Sbjct: 61 SSLKRTEIYSDYKSNRQSAPEDLITQIPRIEEVLDAFNINRYKIEGYEADDVLGSLAKKL 120 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTN-------TILGPEEVVNKYGVPPELIID 178 K V+I TGDKD++QLV NIT+ T+ ++VVN GV PE I D Sbjct: 121 AKQDIEVIIVTGDKDLSQLVEKNITVALLGKGAEGEKFGTLKNSDDVVNYLGVVPEKIPD 180 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 L+GD SD IPGV +GEK A A+ L+ +Y + + + G ++ L Sbjct: 181 LFGLIGDKSDGIPGVTKIGEKKALAIFSQYDSLEKIYENIDNLKSIDGIG-PSLIKNLIN 239 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 K++A++S +LA I T++++++ L+ E L L K EFK + + + Q Sbjct: 240 EKDIAFMSRELAKIFTNLDIDVEESGLQY-GMDRERLYSLCKALEFKMFIKKLGLEEKPQ 298 Query: 299 AK---------GAKPAAKPQETSVADEAPEVTATVISYDN--YVTILDEETLKAWIAKLE 347 K + K E ++ +E +S N + I E +L L Sbjct: 299 NPTLFSSENVGEKKDSTKVVEETINEEIEFTKEVNLSLTNRQVLIIDSESSLNEQKEYLA 358 Query: 348 KAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKP 407 A +I +G+ + E Y P+ H L A + I + + + Sbjct: 359 NYKKIA---------SIYYESLGIIISTEDKD-FYFPLNHGGLLAKN-IDKNLVVNFISQ 407 Query: 408 LLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLK 467 L + N K L N GI + + D M+ ++++S + ++ E + K Sbjct: 408 L----DIKFISYNFK----ALLNLGISFKSMYMDMMIAYHLISSQTKIDPIIAITE-YSK 458 Query: 468 HKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFE 527 + F+ GK +L I ++ +Y ++ + L ++ ++ L+K V Sbjct: 459 LEPKDFKATFGKVNVEL----ITTQDFSKYLSDISIGILAIYDELNYLLKKED-LYKVLM 513 Query: 528 NIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQ 587 EMPL+PVLS +ER G++ID + N+S EL L +EK +E AGEEFN++S KQL Sbjct: 514 ENEMPLIPVLSLMERKGIEIDVQYFKNYSVELDKELLRIEKAIYEEAGEEFNINSPKQLG 573 Query: 588 TILFEKQGIKPLKKTPGGAPSTSEEVLEEL-ALDYPLPKVILEYRGLAKLKSTYTDKLPL 646 ILF K + KKT G ST VLE+L + Y + +++L+YR L KLK+TY D LPL Sbjct: 574 DILFVKMNLPSGKKTKTGY-STDVMVLEDLESYGYNIARLLLDYRKLNKLKTTYVDTLPL 632 Query: 647 MINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADY 706 +++ + R+HTS++Q TATGRLSS+DPNLQNIPV+ ++G +IR+ FIA E V++S DY Sbjct: 633 LVD-ENSRIHTSFNQIGTATGRLSSSDPNLQNIPVKTDDGIKIREGFIAGEGKVLMSIDY 691 Query: 707 SQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFG-LPLETVTSEQRRSAKAINFGLI 765 SQ+ELR++ +S+D+ L+ A+ E KD+H TA +F ETV+ EQR AK INF +I Sbjct: 692 SQVELRVLTSMSKDENLIEAYREEKDLHDLTARRIFNLADSETVSREQRTIAKIINFSII 751 Query: 766 YGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYL 825 YG + FGLA++L IP K+A +Y+ YFE+YP V + + +E GYV+TL GR+ Y+ Sbjct: 752 YGKTPFGLAKELKIPVKDASEYIKKYFEQYPRVTTFEKEVIEFGEEHGYVKTLFGRKRYI 811 Query: 826 PDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELV 885 I S N ++ AER A+N +QGTAA+++K+ M+ V L+ ++ + +++QVHDEL+ Sbjct: 812 SGIDSKNKTIKSQAERMAVNTVIQGTAAEVLKKVMVKVYDVLK-DKEDIALLLQVHDELI 870 Query: 886 FEVHKDDVDAVAKQIHQLMENCTRL-DVPLLVEVGSGENWDQA 927 FEV K V+ ++ + +M+N +L DV L + + G+NW +A Sbjct: 871 FEVEKSSVEKYSEILADIMKNTVQLEDVKLNININIGKNWAEA 913 >UniRef50_UPI0001BC5C75 DNA polymerase I n=3 Tax=Fusobacterium RepID=UPI0001BC5C75 Length = 894 Score = 810 bits (2092), Expect = 0.0, Method: Composition-based stats. Identities = 332/925 (35%), Positives = 493/925 (53%), Gaps = 37/925 (4%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 +L+D S+ +YRAY+A + PTGA+YG L L L+ +Y+ + A FD K Sbjct: 2 KRALLLDVSAMMYRAYYANMNMRTKE-MPTGAVYGFLLSLFQLLKEYESEYMAAAFDIKR 60 Query: 67 -KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 R EL+ YKS+R P+DL QI + A++ A G+ + + G EADD++G+L+ + Sbjct: 61 SHLKRTELYAEYKSNRDTTPEDLVKQIPYIEAILDAFGIQRIKIDGYEADDILGSLSTKL 120 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185 K G PV I TGDKD++QL+ N + + E+V N V PE I D L+GD Sbjct: 121 SKKGIPVTIVTGDKDISQLLDENTEIYLLGKEVLKTREDVKNYIDVYPEKIPDLFGLIGD 180 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 SSD IPGV +G K A +L+ G L+ +Y +K++ L G KT+ ++++KE+A+L Sbjct: 181 SSDCIPGVRKIGPKKAVPMLEKYGNLEGIYENIDKLSELPGVG-KTLIQIMKEDKELAFL 239 Query: 246 SYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPA 305 S LA I+ +++ + E+L+ + E L +F+K EFK + + + + + K Sbjct: 240 SRSLAKIERNLDFPFSLEELQF-EKKEEALREIFQKLEFKSFLKRLGSEETKEEKSLLQG 298 Query: 306 AKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNIS 365 + A++ + + + EE K +E D + + Sbjct: 299 NLFSASPRAEKESRTEVKEKNLEKKIIKSFEELKKEMED----------FSEEDKILLLY 348 Query: 366 ANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDR 425 L G++ Y+P H+ L + LE K K +LK Sbjct: 349 DRL-GITCTFS-QKNLYLPFFHEGL-----LGNNLDLEECKQFFSTLKGKIYTYHLKE-- 399 Query: 426 GILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLT 485 L G +D M+ Y L S + D + + +LK + + K K Sbjct: 400 --LYKLGFSFSKPVYDMMIA-YHLVSSQTKEDYTLIGQYYLKKIAEDEKTVFAKQK---- 452 Query: 486 FNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGV 545 ++ E G + A V + D+ K K V E+PL+PVL+ +ER G+ Sbjct: 453 LESLSAEVYGDFLLNRAGVLYSCLDILEEDV-KEKELEAVLWETELPLIPVLADMERIGI 511 Query: 546 KIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGG 605 KID K +S ELT +LA LEK E AGEEFNL+S KQL ILF K + KKT G Sbjct: 512 KIDRKYFEAYSLELTEKLALLEKAIWEEAGEEFNLNSPKQLGEILFLKLNLPTGKKTKTG 571 Query: 606 APSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVT 664 ST EVLE L+ + + +LEYR LAKLK+TY D +P M R+HT YHQ T Sbjct: 572 -FSTDVEVLEHLSSQGFQIASNLLEYRKLAKLKNTYVDPIPKMTGEGD-RIHTCYHQIGT 629 Query: 665 ATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLL 724 TGRLSS+DPNLQNIPV+ EEG RIRQ FIA E + ++S DYSQ+ELR++A LS+D+ LL Sbjct: 630 VTGRLSSSDPNLQNIPVKTEEGIRIRQGFIAREGWKLLSIDYSQVELRVLASLSKDENLL 689 Query: 725 TAFAEGKDIHRATAAEVFG-LPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKE 783 A+ E +D+H TA +F E V+ EQR AK INF +IYG + FGLA++L I K+ Sbjct: 690 KAYQEKQDLHSVTAKRIFELQEDEEVSREQRIMAKIINFSIIYGKTPFGLAKELGISVKD 749 Query: 784 AQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAA 843 A +Y+ YF +YP V ++ + A+E GYVET GRR + I S N ++ AER A Sbjct: 750 AGEYIKRYFAQYPRVAQFERQVITFAEEHGYVETYFGRRRIIDGIHSKNKMVKSQAERMA 809 Query: 844 INAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQL 903 +N +QGTAA+I+K+ MI + +WL +++ + +++QVHDEL+FE+ + + + + + Sbjct: 810 VNTVVQGTAAEILKKVMIKIYSWL-SQKTDIHLLLQVHDELIFEIQEGKLQEYEENLIRF 868 Query: 904 MENCTRL-DVPLLVEVGSGENWDQA 927 M +L +V L V G+ W +A Sbjct: 869 MRETIQLEEVELEVNTNIGDTWAEA 893 >UniRef50_P52027 DNA polymerase I n=4 Tax=Deinococci RepID=DPO1_DEIRA Length = 956 Score = 809 bits (2090), Expect = 0.0, Method: Composition-based stats. Identities = 340/954 (35%), Positives = 480/954 (50%), Gaps = 78/954 (8%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 + L+L+DG + +R+Y A PPL NS GE T A+ G + +L L Q K VVFD Sbjct: 47 DTLVLIDGHALAFRSYFALPPLNNSKGEMTHAIVGFMKLLLRLARQ-KSNQVIVVFDPPV 105 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 KTFR E +E YKS R P+DL QI + A+V A+G P L G EADDVI +L R AE Sbjct: 106 KTFRHEQYEGYKSGRAQTPEDLPGQINRIRALVDALGFPRLEEPGYEADDVIASLTRMAE 165 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDS 186 G V I T D+D QL+ ++ +I +++GP +V KYGV +D+ AL GD+ Sbjct: 166 GKGYEVRIVTSDRDAYQLLDEHVKVIAN-DFSLIGPAQVEEKYGVTVRQWVDYRALTGDA 224 Query: 187 SDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLS 246 SDNIPG G+G KTA LLQ G L+ +Y KL ++E S Sbjct: 225 SDNIPGAKGIGPKTAAKLLQEYGTLEKVYEAAH----AGTLKPDGTRKKLLDSEENVKFS 280 Query: 247 YQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAA 306 + L+ + TD+ L++ + L + E + + G P Sbjct: 281 HDLSCMVTDLPLDIEF-GVRRLPDNPLVTEDLLTELELHSLRPMILGLNGPEQDGHAPDD 339 Query: 307 KPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISA 366 E A E A + L W E A + D L Sbjct: 340 L-LEREHAQTPEEDEAAALPA------FSAPELAEWQTPAEGAVWGYVLSREDDLTAALL 392 Query: 367 NLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLL--EDEKALKVGQNLKYD 424 + P +AP+ + E L KPL E + K ++ + Sbjct: 393 AAATFEDGVARPAPVSEPDEWAQAEAPENLFGEL-LPSDKPLTKKEQKALEKAQKDAEKA 451 Query: 425 RGILA--------------------------NYGIELRG----IAFDTMLESYILNSVAG 454 R L + +RG D +L +Y+L+ Sbjct: 452 RAKLREQFPATVDEAEFVGQRTVTAAAAKALAAHLSVRGTVVEPGDDPLLYAYLLDPANT 511 Query: 455 RHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWP 514 +M +A+R+L + A A +T L ++ P Sbjct: 512 --NMPVVAKRYLDREWPAD------------------------APTRAAITGHLLRELPP 545 Query: 515 DLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIA 574 L +++ +E PL VL R+E GV++D L S + +RLA+LE + HE A Sbjct: 546 LL--DDARRKMYDEMEKPLSGVLGRMEVRGVQVDSDFLQTLSIQAGVRLADLESQIHEYA 603 Query: 575 GEEFNLSSTKQLQTILFEKQGIKPLKKTP-GGAPSTSEEVLEELALDYPLPKVILEYRGL 633 GEEF++ S KQL+T+L++K + KKT G ST+ LE L +P+ ++LE+R L Sbjct: 604 GEEFHIRSPKQLETVLYDKLELASSKKTKLTGQRSTAVSALEPLRDAHPIIPLVLEFREL 663 Query: 634 AKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAF 693 KL+ TY D +P ++NP TGR+HT++ Q ATGRLSS +PNLQNIP+R+E GR IR+ F Sbjct: 664 DKLRGTYLDPIPNLVNPHTGRLHTTFAQTAVATGRLSSLNPNLQNIPIRSELGREIRKGF 723 Query: 694 IAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQ 753 IA + + +++ADYSQIELR++AH++ D + AF EG DIHR TAA+V GL TV + Q Sbjct: 724 IAEDGFTLIAADYSQIELRLLAHIADDPLMQQAFVEGADIHRRTAAQVLGLDEATVDANQ 783 Query: 754 RRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQG 813 RR+AK +NFG++YGMSA L+ L IP EA ++++YF YPG+ Y+ T + G Sbjct: 784 RRAAKTVNFGVLYGMSAHRLSNDLGIPYAEAATFIEIYFATYPGIRRYINHTLDFGRTHG 843 Query: 814 YVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPR 873 YVETL GRR Y+P + S N +R A ER A N P+QGTAADI+K AM+ +D L A Sbjct: 844 YVETLYGRRRYVPGLSSRNRVQREAEERLAYNMPIQGTAADIMKLAMVQLDPQLDA--IG 901 Query: 874 VRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 RM++QVHDEL+ E D + VA ++MEN +L VPL VEVG+G NW Sbjct: 902 ARMLLQVHDELLIEAPLDKAEQVAALTKKVMENVVQLKVPLAVEVGTGPNWFDT 955 >UniRef50_D1AJI6 DNA polymerase I n=2 Tax=Fusobacteriaceae RepID=D1AJI6_SEBTE Length = 885 Score = 805 bits (2080), Expect = 0.0, Method: Composition-based stats. Identities = 332/932 (35%), Positives = 494/932 (53%), Gaps = 62/932 (6%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 +++D S+ +YR + A + NS G+ TGA YG +N L +I ++ P + D K Sbjct: 2 PKAVILDTSAIMYRTHFALMGMRNSKGKATGATYGFINTLNLIIKEFSPDYLVACLDVKR 61 Query: 67 KT-FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 R YK+HR MP++L QI + ++ A +P V G EADDVI TLA++ Sbjct: 62 SELKRTSELTEYKAHREDMPEELVYQIPKIMEVLDAYNIPKYKVDGYEADDVIATLAKKF 121 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNT-------ILGPEEVVNKYGVPPELIID 178 V I TGDKD+ QL+ NI + I ++VV GV P+ +ID Sbjct: 122 SDDNNEVFIVTGDKDLMQLIKDNINIALLGKGDGKSQFKYIQTEQDVVEYLGVRPDQVID 181 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 LMGD SD IPG+ G+G KT L+ G L+TLY E+I G KLE Sbjct: 182 LFGLMGDKSDGIPGIQGIGPKTGVELISKYGNLETLYENIEEIKG-------KRKEKLEN 234 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVE-AGKWL 297 KE A+LS +LAT+ D+++E E+L+ ++ ++L+ L+K+ EFKR+ D E A K Sbjct: 235 EKENAFLSRELATVHMDLDVEYNKEKLKYEEKNMDKLIPLYKEMEFKRFLEDAERAKKIA 294 Query: 298 QAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTE 357 + + E T Y+ T+ E + K+ V FD E Sbjct: 295 NPLQGTLFQTAVQEKIPAVKEEKKETPFQYEIIETLEKAEEIT----KIIGDEVTVFDNE 350 Query: 358 TDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKV 417 L F I Y A D D + + +D+ Sbjct: 351 -------------LGFGISNKEKNYYIPAAIISDKADFLKK----------FKDKNVN-- 385 Query: 418 GQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIA 477 N+K L G+E + FD ML Y+L + A + D++S+ + +E Sbjct: 386 AYNIKE----LFKSGLEYKD-YFDIMLVWYVLGTEAAQ-DLESIIFSEFQVLLEKYEVEF 439 Query: 478 GKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVL 537 + ++++ E + + + +L + L+ G NV+ENIE LVPVL Sbjct: 440 ----KKQNMDEVSPERKAEFLTKRSYYMTRLKEILGHRLEAE-GLNNVYENIEKKLVPVL 494 Query: 538 SRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIK 597 + +E+ G+ IDP + EL LAE+EK + +AGEEFN++S KQL ILFEK + Sbjct: 495 ADMEKKGILIDPDYFGKYGNELKNNLAEIEKNIYGLAGEEFNINSPKQLSEILFEKMMLD 554 Query: 598 PLKKTPGGAPSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVH 656 P+KKT G ST EVLE LA + + ILEYRG KL +TY + LP + + + R+H Sbjct: 555 PVKKTKTGY-STDVEVLEVLAAQGVEVAEKILEYRGYTKLLTTYVEPLPKLADSE-NRIH 612 Query: 657 TSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAH 716 T++HQ TATGRLSS++PN+QNIPV+ +EG +IR+ F++ E + +S DYSQIELR++A Sbjct: 613 TTFHQNGTATGRLSSSNPNIQNIPVKTDEGIKIRRGFVSEEGWSFISFDYSQIELRVLAE 672 Query: 717 LSRDKGLLTAFAEGKDIHRATAAEVF-GLPLETVTSEQRRSAKAINFGLIYGMSAFGLAR 775 LS D+ L+ A+ + KD+H TA ++F E V+ E+R AK INF ++YG + FGL++ Sbjct: 673 LSEDETLILAYQKDKDLHDLTARKLFFKTDEEPVSREERSIAKVINFSILYGKTPFGLSK 732 Query: 776 QLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGAR 835 +L IP +A+ Y++ YFE YP V ++ +AK G+VETL G R Y+ I SSN Sbjct: 733 ELKIPMGDAKLYINKYFEEYPRVRTFLNSVLQEAKLNGFVETLYGTRRYITGINSSNKNI 792 Query: 836 RAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDA 895 A A+R A+N +QGTAA+IIK M+ + + ++ + M++QVHDEL+FEV + VD Sbjct: 793 EAQADRMAVNTVVQGTAANIIKIVMVKLYEEFK-DKEDINMLLQVHDELIFEVKNESVDK 851 Query: 896 VAKQIHQLMENCTRL-DVPLLVEVGSGENWDQ 926 K+I +MEN +L +V L G+NW + Sbjct: 852 YLKEIDNIMENTIKLKNVRLAANGNVGKNWGE 883 >UniRef50_B8IZN9 DNA polymerase I n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8IZN9_DESDA Length = 921 Score = 802 bits (2073), Expect = 0.0, Method: Composition-based stats. Identities = 309/953 (32%), Positives = 479/953 (50%), Gaps = 64/953 (6%) Query: 2 VQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 + + P+ L+DGS+++YR + A + S G PT A+ V +L ++ + +P + V Sbjct: 7 LDLATEPVFLMDGSAFIYRGFFANRNMQRSDGFPTNALVVVTRVLLRILREERPQYFLFV 66 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 D KGK FR ++F YK++R P+DL Q++P+ MV A+G+ L EADD I +L Sbjct: 67 KDGKGKNFRHDIFPLYKANRDATPEDLVRQMQPIERMVTALGMNLEVSDHCEADDCIASL 126 Query: 122 AREAEKAGRPVLISTGDKDMAQLVTPNITLINT--MTNTILGPEEVVNKYGVPPELIIDF 179 A + RPV+I GDKD+ Q + PN+ + + +L + + G+ P D Sbjct: 127 AARFSQE-RPVVIVGGDKDLKQCLGPNVYMWDPAFRDEKLLTAAQFTEESGLTPAQWPDV 185 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 AL+GD+SDNIPGVPG+G KTA + + L+ + + + KL + Sbjct: 186 QALVGDTSDNIPGVPGIGPKTAAKIFEICPSLEDIRDHFALLP-------PKIQDKLRDH 238 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 + + +L T+ DV + + L V+ A L +++E ++ + + +Q Sbjct: 239 LDEMFTWRKLTTLSLDVCTAVEMDDLLVRPINAARCADLAEEFELHALRREMASLERMQL 298 Query: 300 KGAKPA--AKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTE 357 + A E + P ++A+ + + A L A + Sbjct: 299 SAPADSERAGKDERFRGESLPLLSASAEAGSDAKKTGGGPARGAAAQPLPPKGAGAQMSL 358 Query: 358 TDSLDNISANLVG------------LSFAIEPGVAAYIPVAHDYLDAPDQISRERALELL 405 + ++ A V ++ G + H ++ + + E + Sbjct: 359 LEVVEEKPAPQVSRVEDLPDCRGRNVALVWARG---FDAAPHAAVEGGEDVCWTGGQESM 415 Query: 406 KPL--LEDEKALKVGQNLKYDRGILA-NYGIELRG---IAFDTMLESYILNSVAGRHDMD 459 L E V +LK A + D L +Y++N + Sbjct: 416 SLLCAWAAEARRIVTPDLKGLLSQAACWRSLTQEKKQDFFMDLGLAAYLVNPEESDYAWP 475 Query: 460 SLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKH 519 LA W ++ G A + L++ + + + Sbjct: 476 RLAVHWG---APLRDDGPG----------------------PALLALRMVEVLEARM-RQ 509 Query: 520 KGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFN 579 G ++E++E+PL P+L+ +ER G+ ID + ++ RL L +E AG EFN Sbjct: 510 DGLAELYESLELPLTPILADMERRGIAIDAAAFESFLSDVQGRLDTLTAAVYEAAGREFN 569 Query: 580 LSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKST 639 + S +QL +LF + +KT GG STS++ LE+LA +P+ +LE+R L K++ST Sbjct: 570 IRSAQQLGDVLFSTLELPSPRKTKGGQASTSQDTLEKLAGRHPVVDSVLEFRKLEKMRST 629 Query: 640 YTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY 699 Y D LP +++ GR+HT+++Q TATGRLSS++PNLQNIPVR + G+R+R FIA Sbjct: 630 YLDPLPRLMD-GNGRIHTTFNQKATATGRLSSSNPNLQNIPVRGDLGKRMRTCFIANPGS 688 Query: 700 VIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKA 759 +VSADYSQ+ELR++AH+S+DK LL AF G+DIH TAA V+ L + V+ +QRR+AK Sbjct: 689 ALVSADYSQVELRVLAHMSQDKALLEAFRNGEDIHARTAALVYDLAPDQVSPDQRRNAKT 748 Query: 760 INFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLD 819 INFGLIYGM A L + L I EA++++ YF R G+ E+ + A AK QGYV TL Sbjct: 749 INFGLIYGMGAQKLGQDLKISTSEAKEFIARYFSRLTGLKEFYDSVEATAKRQGYVTTLG 808 Query: 820 GRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQ 879 GRR LPDI S NG A A R AIN +QG+AADIIK AM+AV Q + R+++Q Sbjct: 809 GRRRLLPDIHSPNGQAYALARRQAINTVIQGSAADIIKLAMLAVAEDEQLREHEARLLLQ 868 Query: 880 VHDELVFEVHKDDVDAVAKQIHQLMENC----TRLDVPLLVEVGSGENWDQAH 928 VHDEL+ EV + A ++ LM + L VPL+V+ G G+NW AH Sbjct: 869 VHDELLLEVPEASARAAGARVADLMSSVKPGGEPLSVPLVVDWGVGKNWGAAH 921 >UniRef50_C3WHF0 DNA polymerase I n=3 Tax=Fusobacterium RepID=C3WHF0_9FUSO Length = 916 Score = 798 bits (2062), Expect = 0.0, Method: Composition-based stats. Identities = 328/938 (34%), Positives = 505/938 (53%), Gaps = 41/938 (4%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 +L+D S+ +YRAY A EPTGA+YG +N L S+I ++ P + A FD K Sbjct: 2 KRAVLLDVSAIMYRAYFANMNFRTKN-EPTGAVYGFINTLLSIIKEFNPDYMAAAFDVKR 60 Query: 67 KT-FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 + R E+F YKS+R P+DL AQI + ++ A + + EADDV+G++A++ Sbjct: 61 SSLKRTEIFGDYKSNRQSTPEDLVAQIPRIEEVLDAFNINRYRIESYEADDVLGSIAKKI 120 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNT-------ILGPEEVVNKYGVPPELIID 178 K V+I TGDKD++QLV NIT+ T + E+VVN GV PE I D Sbjct: 121 AKDDLEVIIVTGDKDLSQLVEKNITIALLGKGTEGEKFGMLRTAEDVVNYLGVVPEKIPD 180 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 L+GD SD IPGV +GEK A A+ L+ +Y + + + G ++ L Sbjct: 181 LFGLIGDKSDGIPGVTKIGEKKALAIFSKYDSLEKIYENIDDLKNIEGIG-PSLIKNLTN 239 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 K++A+LS +LA I T++++ L E L+ E+L L K EFK + + + Q Sbjct: 240 EKDIAFLSRELAKIFTNLDINLEEENLKYS-MDKEKLYELCKTLEFKMFIKKLNLEEKTQ 298 Query: 299 AKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTET 358 KP S+ D+ EV T V + + + + + Sbjct: 299 TSNFD--HKPVLLSLFDKVEEVEKTEKVEKEIVYEKELNINFSNRELVIIDNETLLNEQK 356 Query: 359 DSLDNISA------NLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDE 412 + L+N +G+ + E Y P+ H L +S+ L + + Sbjct: 357 EYLNNYKKIASIYYEELGIILSTEEKD-LYFPLNHGGL-----LSKNIDKNTLIKFIAEL 410 Query: 413 KALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTIT 472 + N K L N G + + D M+ Y L S + D+ + Sbjct: 411 DVKFISYNFK----TLLNLGFTFKSMYMDMMIA-YHLISSQTKMDVFIPITEYSNVDAKD 465 Query: 473 FEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMP 532 F+ GK + + E Y ++ L ++ ++ L K + ++ EMP Sbjct: 466 FKTTFGKA----HIETLLVGEFAGYLSKIGLGILAIYDEINHILHKEE-LYDILIQNEMP 520 Query: 533 LVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFE 592 L+PVLS +ER G+KID N+S EL LA++EK +E AGEEFN++S KQL ILF Sbjct: 521 LIPVLSLMERKGIKIDVSYFKNYSLELEKELAKIEKAIYEEAGEEFNINSPKQLGDILFV 580 Query: 593 KQGIKPLKKTPGGAPSTSEEVLEEL-ALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPK 651 K + KKT G ST VLE+L + Y + +++L+YR L KLK+TY D LP +++ Sbjct: 581 KMNLPSGKKTKTGY-STDVMVLEDLESYGYNIARLLLDYRKLNKLKTTYVDTLPNLVDSN 639 Query: 652 TGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIEL 711 + R+HTS++Q TATGRLSS++PNLQNIPV+ ++G +IR+ F+A E V++S DYSQ+EL Sbjct: 640 S-RIHTSFNQIGTATGRLSSSEPNLQNIPVKTDDGIKIREGFVAGEGKVLMSIDYSQVEL 698 Query: 712 RIMAHLSRDKGLLTAFAEGKDIHRATAAEVFG-LPLETVTSEQRRSAKAINFGLIYGMSA 770 R++ +S+D+ L+ A+ E KD+H TA +F + VT EQR AK INF +IYG +A Sbjct: 699 RVLTSMSKDENLIEAYREEKDLHDLTARRIFNLSDSDDVTREQRTIAKIINFSIIYGKTA 758 Query: 771 FGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKS 830 FGLA++L IP K+A +Y+ YFE+YP V + + +E GYV+TL GR+ Y+ I S Sbjct: 759 FGLAKELKIPVKDASEYIKKYFEQYPRVTTFEKEVIEFGEEHGYVKTLFGRKRYISGIDS 818 Query: 831 SNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHK 890 N +A AER A+N +QGTAA+++K+ M+ V L+ ++ + +++QVHDEL+FEV + Sbjct: 819 KNKTIKAQAERMAVNTVIQGTAAEVLKKVMLKVYETLK-DKDDIALLLQVHDELIFEVEE 877 Query: 891 DDVDAVAKQIHQLMENCTRL-DVPLLVEVGSGENWDQA 927 V+ ++ + +M+N +L DV L + + G+NW +A Sbjct: 878 SSVEKYSEILADIMKNTVKLEDVNLNININIGKNWAEA 915 >UniRef50_B2KCD2 DNA polymerase I n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KCD2_ELUMP Length = 862 Score = 798 bits (2061), Expect = 0.0, Method: Composition-based stats. Identities = 326/927 (35%), Positives = 495/927 (53%), Gaps = 75/927 (8%) Query: 3 QIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 + + + D ++L+R YHA P L+ S G GA+YG + L L+ + KP + AV F Sbjct: 2 SADKKTIYIADAHNFLHRNYHALPKLSTSQGLEVGALYGFVRWLVKLVEEKKPHYVAVCF 61 Query: 63 DA-KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 D+ G T R ++F YK+HR P+ + L Q++ +V MGL + AV G+EADD+IG + Sbjct: 62 DSRGGSTKRKKMFSDYKAHRKPVDEALLTQLQLAREVVSGMGLKVFAVQGIEADDIIGFI 121 Query: 122 AREAEKAGRPVLISTGDKDMAQLVTPNITLI--NTMTNTILGPEEVVNKYGVPPELIIDF 179 A+++ G +++T DKD QL+ +I L ++ GP+ V K+ + + + D+ Sbjct: 122 AKKSVAEGADAVLATSDKDALQLLNEHIKLWPAGAAKESLKGPDYVKEKFNIAQKYLTDY 181 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 LA++GDSSDN+PGV G+G KTA L+ G L+ + + + + K A K+ N Sbjct: 182 LAIVGDSSDNVPGVAGLGPKTAAELINNFGYLEDIIK---EAKAGNPKIKKGAAQKIIDN 238 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 + VA LS QL T+ ++ ++ T E PA +L LF KYEFK + ++ + Sbjct: 239 EAVAILSKQLVTLDENIPMDFTLEDAVFSPPAPAKLSELFAKYEFKNLLSAFDSARPKNT 298 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 + ++ E EV + K +I E + + D++T Sbjct: 299 PEGELFSQDTEIKQGISFNEVVNKIKD-------------KMFIQTDENFVLISADSQTC 345 Query: 360 SLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQ 419 L+ + D +++E L+ ++ L +++ LK+ Sbjct: 346 CLEEL-----------------------------DNLTQEELLK-IEELANNKQILKISY 375 Query: 420 NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 ++K+ L E+ FD L +Y LN A +LA ++L +E Sbjct: 376 DVKFTLRALDVTPKEIIN-CFDVRLAAYSLNPGADI-GFKALAAQYLDVIIEPKDE---- 429 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 K LT L + DL K K +F +E+PL+ VL Sbjct: 430 -KEFLTLQN--------------QYIWSLKEVLERDL-KEKDQFKIFNELELPLITVLLA 473 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 +E GV +D L N S+ L +A ++ ++ A E N++S KQL +LF++ + + Sbjct: 474 MEEIGVLVDKAWLENFSKTLEGEIAAIQNDINKDAQREINVNSPKQLGALLFDQLKLPSV 533 Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 KKT G ST EEVL++L +P+ K ILEYR AKLKSTY D L +M+ RVHT Sbjct: 534 KKTKTGY-STDEEVLQQLVNLHPIVKKILEYRSNAKLKSTYVDNL-IMLADGNSRVHTYL 591 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSR 719 Q T TGRLSS+ PNLQNIP+R +GR +R+AF+A ++S DYSQI+LR++AH S+ Sbjct: 592 DQTGTVTGRLSSSSPNLQNIPIRTPKGRMLRRAFVAEGGKTLLSVDYSQIDLRLLAHESQ 651 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 D L+ AF EG DIH TAAEVFG+ E V+ E R SAKAINFG+IYG GL++ LNI Sbjct: 652 DSVLVNAFKEGGDIHTKTAAEVFGVMREMVSDEMRSSAKAINFGIIYGQGPMGLSQNLNI 711 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 +EA++Y+D YF Y GV E++++ A A+E+GYV+TL G YLP+ K +G + A Sbjct: 712 SVREAKEYIDNYFAVYKGVREWIDKNIALARERGYVKTLLGHIRYLPEFKMGSGHMASFA 771 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 +RAAIN +QG +AD+IK+AM + + V+M++QVHDEL+FE+ + ++ A Sbjct: 772 QRAAINTIVQGGSADVIKKAMADIFN--HYKGTEVKMLLQVHDELIFELPEKNLLKEAAV 829 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWDQ 926 I ME+ L VPLL E +G NW + Sbjct: 830 IKNKMEHTIELKVPLLAEAKTGVNWYE 856 >UniRef50_B2GGW1 DNA polymerase I n=1 Tax=Kocuria rhizophila DC2201 RepID=B2GGW1_KOCRD Length = 960 Score = 791 bits (2042), Expect = 0.0, Method: Composition-based stats. Identities = 312/959 (32%), Positives = 477/959 (49%), Gaps = 69/959 (7%) Query: 2 VQIPQNPLILVDGSSYLYRAYHAF---------PPLTNSAGEPTGAMYGVLNMLRSLIMQ 52 V P+ L+L+DG S +RA+ A P S G T +YG +N + L+ + Sbjct: 36 VSRPEKRLLLIDGHSLAFRAFFALSRAAEYGNGPGFVTSEGVHTEGVYGFVNTMVKLVRE 95 Query: 53 YKPTHAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGV 112 KPTH V FD +G T R + + YK R P++ Q+ + +++A+G+P++ + G Sbjct: 96 EKPTHLVVSFDLEGPTLRSQEYGEYKGGRDETPEEFHGQVPNIQRVLEALGVPIVTMEGH 155 Query: 113 EADDVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNK 168 EADDV+ TLA A VL+ +GD+D Q++T ++T++ + V K Sbjct: 156 EADDVLATLASRAAAEDFEVLVFSGDRDAFQMITDHVTVVYPGRTPSDLRRMDAAAVYEK 215 Query: 169 YGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRG 228 Y V P+ D AL G+++DN+PGVPGVG A + G +D+L +I G Sbjct: 216 YKVAPQNYPDLAALTGETADNLPGVPGVGPGFAAKWITAYGPVDSLLEHAGQITG----- 270 Query: 229 AKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWT 288 L +N+E+ + +L + TD+ LE+ + + AE + +F + EF Sbjct: 271 --KKGEALRENEELVRRNRKLNRLVTDLPLEIDLSATALPKAHAERVAEVFDELEFGSQL 328 Query: 289 ADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAW-IAKLE 347 G+ L+A A+ + + A + + + W A+ + Sbjct: 329 R----GRLLEAFAAQTSG------------DDVAALAPVTDVTRVHTAPEFADWLEAQDQ 372 Query: 348 KAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKP 407 APV D + L G A + A + ++ Sbjct: 373 DAPVVVRRLSADPKAPSGEEVTALVLTGTTGAALDLVAA-----------DQELTRAVEQ 421 Query: 408 LLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLK 467 L D A KV LK L GI L G+ D L Y++ ++++S + L+ Sbjct: 422 WLGDTTAAKVVDGLKDLYHGLIQRGIVLAGVVDDVQLSGYLVRPALRSYELESQLAQHLE 481 Query: 468 HKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHL--------KMWPDLQKH 519 + EE G +E DA + + L + L + Sbjct: 482 VEVPAAEESTGGADAHGQTALALEDEDALGGVSDAVLVREATLGRACRELSEHLRALLEA 541 Query: 520 KGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFN 579 G L + +EMPL +L+R+E G+ +D + E+L + + ++A E N Sbjct: 542 DGQLGLLTELEMPLAVILARMEATGIAMDRPGIDVLFEDLQHPIDQAFEQAQAQIDHEVN 601 Query: 580 LSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYP------LPKVILEYRGL 633 L STKQLQ ++F++ G+ KKT G + + V + + P ++ +R Sbjct: 602 LGSTKQLQAVMFDELGLPKTKKTKTGYTTDASAVADLIGKVSPDTAGSRFLVALMNWREY 661 Query: 634 AKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAF 693 +KLK L I + GR+HT+Y Q V ATGRLSST PNLQNIPVR E+G+RIR F Sbjct: 662 SKLKQI-VAGLRDAI-AEDGRIHTTYQQTVAATGRLSSTGPNLQNIPVRTEQGQRIRDVF 719 Query: 694 IAPED-----YVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLET 748 + ED +++ADYSQIE+RIMAHLS D+GL+ AF G+D+HR + VF + E Sbjct: 720 VVGEDTQGPFECLMTADYSQIEMRIMAHLSGDEGLIEAFRGGEDLHRFVGSRVFDVAPED 779 Query: 749 VTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQ 808 VT + R KA+++GL+YG+S++GL++QL+I EA+ M YFER+ GV +++ + Sbjct: 780 VTPQMRSKVKAMSYGLVYGLSSYGLSQQLHIGVDEARTMMSGYFERFGGVRDFLRGVVEE 839 Query: 809 AKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQ 868 A+ +GY ET+DGRR YLPD+ S N R AAER A+NAP+QG+AADIIK+AMI VD L+ Sbjct: 840 ARSKGYTETIDGRRRYLPDLTSDNRQARQAAERMALNAPIQGSAADIIKKAMIGVDRALR 899 Query: 869 AEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 Q R R+++QVHDEL+ EV + + V + + M L VPL V VG+G W QA Sbjct: 900 DGQLRSRVLLQVHDELIVEVAPGEREEVERILRTEMAGAAELTVPLDVNVGTGRTWHQA 958 >UniRef50_A3EQ00 DNA polymerase I n=3 Tax=Leptospirillum RepID=A3EQ00_9BACT Length = 872 Score = 791 bits (2042), Expect = 0.0, Method: Composition-based stats. Identities = 303/939 (32%), Positives = 477/939 (50%), Gaps = 101/939 (10%) Query: 3 QIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 +P + L+L+DG Y++RAYH+ AG PT A+ NML S++ + P+ AVVF Sbjct: 20 DLPPSTLVLMDGFGYIFRAYHSRVTFVTRAGLPTDAITVFGNMLLSVLKELSPSAMAVVF 79 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 +++ R E+ K++RP P D QI + +++ +G+PLL+ G EADD I LA Sbjct: 80 ESRTGNVRSEILPEIKANRPEPPSDFLQQIPYIERLIRGIGVPLLSTDGYEADDTIAALA 139 Query: 123 REAEKAGR------PVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELI 176 + V++ + DKD+ LV+ + + + MT +LGP +V K+GV P I Sbjct: 140 LKWLNHHDRTNVPCHVVVLSSDKDLLTLVSERVWVYDPMTKKVLGPSDVREKWGVEPWQI 199 Query: 177 IDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKL 236 D LAL GD++DNIPGVPG+G+KTA LL G +DTLY + + + + + A L Sbjct: 200 PDLLALTGDTADNIPGVPGIGQKTAAKLLGNQGTIDTLYEDLDNV------VPERIRALL 253 Query: 237 EQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKW 296 +++E + + ++ + +D+ L L E L + P + L L ++ E + V Sbjct: 254 REHRERVFRNKKVTVLHSDLALSLEPESLSLSPPDMDSLKSLLQELEAPGLLSRVHRTLE 313 Query: 297 LQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDT 356 L+ + S P + + ++ P D Sbjct: 314 LREPSLAREEGKRRQSSEGRLP--------------------FQGDLPQMSGCPGAGIDL 353 Query: 357 ETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALK 416 DS + A + P + S E L+ + ++ KA+ Sbjct: 354 VDDSGFWVHDG----------DQANFYPFS----------SEEEVLKRMSAWRDEGKAVW 393 Query: 417 VGQNLKYDRGILAN-------YGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHK 469 +D+ L GI FD + +Y+L + +++LA R+ Sbjct: 394 C-----FDQTRLYRKCPRFFALGI---PFVFDATIAAYLLEPGHRDYLLENLAARYFLTD 445 Query: 470 TITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENI 529 T + ++L + + +G L + ++I Sbjct: 446 TSDRPRLVRNVLSKLWEDAV-----------------------------KEGLLELVQSI 476 Query: 530 EMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTI 589 E+PL +L ++E G++ID + L + E + ELE++ + +AG F + S KQ+ I Sbjct: 477 EIPLGRILYQMEVLGIRIDRQALESARESIEALARELEEEIYRLAGSRFTILSPKQVGEI 536 Query: 590 LFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMIN 649 L+ K G+ +K G ST EE L L+ +PLP+ IL YR + KL STY D + ++ Sbjct: 537 LYGKLGLPTARKGKTGY-STDEETLTGLSGLHPLPEKILAYRQMKKLLSTYVDPISRGVD 595 Query: 650 PKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQI 709 + GR+H ++Q VTATGRLSS++PNLQNIP+R+ GR IR+ FIA E+ V++SADYSQI Sbjct: 596 AQ-GRLHGQFNQTVTATGRLSSSNPNLQNIPMRSPAGREIRKCFIAGENRVLLSADYSQI 654 Query: 710 ELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMS 769 ELR++AH S D L+ F +DIH TA +FG P VT E RR AK INFG++YGMS Sbjct: 655 ELRLLAHFSEDPELMAVFERNEDIHARTARLLFGDP---VTPETRRKAKTINFGILYGMS 711 Query: 770 AFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIK 829 AF L+ L + EAQ ++D YF +P V + +AK+ G V T+ GR+ +P++ Sbjct: 712 AFSLSLDLGVEPPEAQAFIDRYFGAFPKVGPLFDSILEEAKKTGEVRTILGRKRRIPELS 771 Query: 830 SSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVH 889 + + R ER A+N +QG+AAD+IK++M+ + +++QVHDEL+FEV Sbjct: 772 APDRRSREYGERMAVNTVLQGSAADLIKKSMVDFGQVRKDRPEVGDLLVQVHDELLFEVR 831 Query: 890 KDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 +D+++ + I LME RL VPL+V+VG G+NW AH Sbjct: 832 EDNLEDASGTIRSLMEGALRLKVPLIVQVGHGKNWVDAH 870 >UniRef50_C7GZ50 DNA polymerase I n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZ50_9FIRM Length = 918 Score = 790 bits (2040), Expect = 0.0, Method: Composition-based stats. Identities = 321/961 (33%), Positives = 485/961 (50%), Gaps = 82/961 (8%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + I++DG+S +RAY+A ++ G T A+YG L+ML I + P + AV FD Sbjct: 1 MHSKRAIIIDGNSLFFRAYYAIKANMSADGMATNAIYGFLSMLYKSINDFSPDYIAVAFD 60 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 GKTFR E F+ YK++R D+L QI + ++ AM + +L E DD+IG+ AR Sbjct: 61 LGGKTFRHEKFDDYKANRRKTDDELLMQIPVIKEILAAMNIKILQKKAFEGDDIIGSFAR 120 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPELIIDF 179 E V+I +GDKDM QL++ N + T I ++ ++Y P+ ID+ Sbjct: 121 FVESDDVEVIIISGDKDMFQLISDNTKIAYTKRGISNIDIYDIQKFEDEYNFAPKHFIDY 180 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 A+MGDSSDN GV G+G+K A+ L+ ++ +Y ++I+G LE + Sbjct: 181 KAIMGDSSDNYKGVKGIGDKGARNLVTKYQTIENIYQNIDEISG-------KTKLALENS 233 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 K A++ +LATI +++L LT + +++ P + L ++K Y+ + +E + Sbjct: 234 KMQAFMGKELATIIVNLDLGLTLDDVKLVDPDFDTLASIYKNYKLNTFLKKLETNGCVNG 293 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 DE + + +S D + + A L+KA V D Sbjct: 294 TNDDE---------TDELKGMLSIDVSRD----------VGSLEATLKKADVADLCLIND 334 Query: 360 SLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQ 419 S + AAY V + D R L ++ +EK VG Sbjct: 335 SNHIDKPEI----------YAAYFNVDGNIWLLDDMAQIHRVL----DIVAEEKVKVVGY 380 Query: 420 NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 +LK L G+ L FD ML ++N+ D + E L ++ + + K Sbjct: 381 DLKNALFALLQNGLPLFTPFFDVMLAYEVINNKGKYMDFYKILEDQLGID-VSDKLLKAK 439 Query: 480 GKNQLTFNQI---------------------------ALEEAGRYAAEDADVTL------ 506 K LT + I + +E R EDA + L Sbjct: 440 RKKTLTADDIKERYANICKSLKKTNNDVVNAALGDVESSDENARIGHEDALLYLLETVNI 499 Query: 507 -QLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAE 565 +++ K+ +++ VF IEMPLV V++ +E GV +D + L + EL+ AE Sbjct: 500 FKVYDKLKSQIEEDD-LQKVFYEIEMPLVEVIASMENTGVWLDTEFLKTYEAELSNIEAE 558 Query: 566 LEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPK 625 L K +E+AG EFN++S KQL +LFEK ++P KT G ST+ EVL++L +P+ Sbjct: 559 LLDKIYELAGFEFNVNSPKQLGEVLFEKLNLEPKVKTKRGY-STNAEVLQKLRKTHPIID 617 Query: 626 VILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEE 685 +ILE+R ++KL STY G+V + Q +TGR++ +P LQ IPV+ + Sbjct: 618 LILEFRKVSKLNSTYVRGFMGFKGT-DGKVRPEFLQIGASTGRMACINPALQTIPVKTDM 676 Query: 686 GRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLP 745 G+RIR+AF A +D V VSADYSQIELRI+ H+S D+GL+ AF G+DIH A A V G Sbjct: 677 GKRIRKAFKAGKDRVFVSADYSQIELRILGHVSCDEGLINAFKSGEDIHEAVAVNVLGAQ 736 Query: 746 LETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERT 805 V+ R AKAINFG+IYGMS FGL+ +L I RK+A+KY+D YF ++ V EYME Sbjct: 737 KGAVSKAVRSKAKAINFGVIYGMSDFGLSNELEISRKDAKKYIDEYFAKHRAVYEYMEAQ 796 Query: 806 RAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDA 865 ++ AK+ G V T GR +P+I + N R ER A+N+P+QG ADI+K AM V Sbjct: 797 KSIAKQTGAVRTETGRIRKIPEINAQNIMVRNLGERLAMNSPIQGMGADIMKLAMNNVYR 856 Query: 866 WLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWD 925 +Q + ++++Q+HDELV + D + V K + ME L L+ SGEN Sbjct: 857 AIQKQGLDAKIVLQIHDELVIDASVSDGEKVKKLLKDEMEAAYNLKTGLIANPQSGENLY 916 Query: 926 Q 926 Sbjct: 917 D 917 >UniRef50_C8NZ98 DNA polymerase I n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZ98_ERYRH Length = 833 Score = 784 bits (2026), Expect = 0.0, Method: Composition-based stats. Identities = 315/926 (34%), Positives = 471/926 (50%), Gaps = 101/926 (10%) Query: 7 NPLILVDGSSYLYRAYHAFPP---LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 N L+L+DG+S L+RAY+ + +S+G T A+YG ML I PTH V FD Sbjct: 2 NKLLLIDGNSMLFRAYYGTLSRGYMKSSSGVVTNAVYGFSTMLAKAIEIINPTHVLVAFD 61 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 K KTFR ++F+ YK R + ++L +Q + + A + +SG EADD+IGT++R Sbjct: 62 TKDKTFRHDMFDEYKGTRKEVDEELVSQFALVREFLDAYPIKRFELSGYEADDIIGTMSR 121 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDF 179 V I T D+DM QL+ N+ ++ ++ ++++ G+ P+ I+D Sbjct: 122 MYPD--FKVEILTSDRDMLQLIDDNVDVLLMKKGLTDLRLMDKTSLMDEMGIEPKQIVDM 179 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 ALMGD+SDNIPGVP +GEKTA LL + LY E+I G M K+ + Sbjct: 180 KALMGDTSDNIPGVPSIGEKTALKLLGQYTTFENLYVHKEEIKG-------KMGEKIREF 232 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 +E A +SY+LA I T V L++ ++ + P E L ++KY+ D Sbjct: 233 EEQARMSYKLAEIHTSVPLDIDLSSIKYEIPN-ESLNAFYRKYDMNSLITD--------- 282 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 V E E T S+ + + E L+K +D Sbjct: 283 -------NYDVEVVEKETIEFTNLDSSWKKSMIAISME--------LDKKGNLEGCYLSD 327 Query: 360 SLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQ 419 +NI L+F G A+ L V Sbjct: 328 GKENIY-----LTFGEMVGNEAF------------------------KALISSDTSIVVD 358 Query: 420 NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 + K IE+ D +L ++I+NS + ++A R + F E G Sbjct: 359 SSKSLYRFCLENNIEIANQFDDLLLLAFIVNS-----SITTMA-RLKDEFGLWFHEYEGM 412 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 K A L + + K + L+V+E IE PLVP+LS+ Sbjct: 413 EKG----------------AAFTQAILSQFNTLKTEANKIE-VLSVYEEIEKPLVPILSK 455 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 E G+ +D VL + ++ L + +E+AG EFNL+S KQL +LF+ + Sbjct: 456 CEFRGINVDRSVLDEIALVTHQKIETLSNQVYELAGMEFNLNSPKQLAEVLFDHLKLPTK 515 Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 K ST+ +VLE L ++ + ILEYR KL STY L I+ G++HTS+ Sbjct: 516 K-----KRSTAVDVLEGLIEEHAIIAPILEYRKYQKLYSTYAVGLTKHIHA-DGKIHTSF 569 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSR 719 +Q T TGRLSS+DPNLQNI VR+EE R IR+AF+A E ++S DYSQIELR++++L+ Sbjct: 570 NQHATQTGRLSSSDPNLQNISVRDEETRMIRKAFVASEGCTLMSIDYSQIELRVLSYLAD 629 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 +K ++ AF G DIH TA +FG ++ VTS RR AK++NFG++YGMS +GL++QL+I Sbjct: 630 EKRMMEAFNGGHDIHSETAKAIFG--VDDVTSTMRRQAKSVNFGIVYGMSEYGLSKQLDI 687 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 EA+ ++ Y E YP + +YM+ GYV+TL RR Y+P+I +N A + Sbjct: 688 TIPEARHFITRYNEIYPNITKYMDSVVEDCLRDGYVKTLFNRRRYIPEIYDANRAVKDFG 747 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 +RAA+NAP+QGTAADIIK AMI D L + + MI+QVHDELVF+V+ D+++ + Sbjct: 748 KRAAMNAPIQGTAADIIKIAMIKADELLTSNNYKSSMILQVHDELVFDVYDDELEQIQDL 807 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWD 925 + +ME+ + L V V +G++W Sbjct: 808 MVSVMEHIVSWPIDLNVSVDTGKDWY 833 >UniRef50_D2RAL7 DNA-directed DNA polymerase n=2 Tax=Gardnerella vaginalis RepID=D2RAL7_GARVA Length = 1025 Score = 778 bits (2009), Expect = 0.0, Method: Composition-based stats. Identities = 312/1026 (30%), Positives = 489/1026 (47%), Gaps = 112/1026 (10%) Query: 2 VQIPQNPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAA 59 ++ + L++VDG S +RA+ A + +G+ T +++G + ML ++ + KP A Sbjct: 13 LKNEKGTLLVVDGHSLAFRAFFAISADNFSTRSGQATNSIWGFITMLSQVVKKEKPDRLA 72 Query: 60 VVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIG 119 + FD KG TFR+ + YK R P +L +Q+ + M+KA+G+ + G E DDVIG Sbjct: 73 IAFDVKGGTFRNTMLPQYKGTRDAAPQELLSQLPIIQQMLKALGVTYIEKPGYEGDDVIG 132 Query: 120 TLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPEL 175 TLA AG L+ +GD+D QL+ NIT++ + + V KY V P+ Sbjct: 133 TLAVMGSNAGYRTLVLSGDRDAFQLIDDNITVLYPGQHFKDLKEMDKNAVYEKYHVTPKQ 192 Query: 176 IIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAK 235 D AL G+++DNIPGVPGVG+ A + G L+ + +I+G Sbjct: 193 YPDLAALRGETADNIPGVPGVGDGYAAKWINQFGSLENIIEHSNEISG-------KKGEA 245 Query: 236 LEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTAD----- 290 L +N + L+ ++ + D++L +T + L A +L L + EF Sbjct: 246 LRENIDQVRLNRKVNALVCDLDLGVTVDDLCFGDVDAAKLGILLSQLEFGELKKRKILKT 305 Query: 291 ---------------VEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILD 335 + + + A+ ++++ E + I + T+ D Sbjct: 306 FSNGMQQSIENNMRIMFSSTYEGDANDDKLAQSAQSNIDAENFQEMLAGIDLHHVKTVED 365 Query: 336 ---------------------------------EETLKAWIAK-------------LEKA 349 EE + ++ L+ Sbjct: 366 FIDWENSVSSLLYTKIKKDSKNTEDTFDQVSSEEENFEELNSEKIINNSRKCAEPILKNQ 425 Query: 350 PVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLL 409 V + E + L+ I A I D Q S + LE+L+ L Sbjct: 426 EVVIYAHECNKNSKHHFELIADCLIILIANKAAILYTTDL-----QSSDQALLEMLRKFL 480 Query: 410 EDEKALKVGQNLKYDRGILANYGIELRGIAF-----DTMLESYILNSVAGRHDMDSLAER 464 + ++ V + K G+L + + +F DT L SY+L ++++AE Sbjct: 481 QKNSSITVLHDYKKHLGLLKSLKLFDSNNSFGTPLLDTRLASYLLEPDFRAETLENMAEH 540 Query: 465 WLKHKTITF---EEIAGKGKNQLTFNQI--ALEEAGRYAAEDADVTLQLHLKMWPDLQK- 518 +L +++ E A +G+ L + + EE A L + L Sbjct: 541 YLDIQSVEDNLGENEAKQGELDLLIDNEVSSSEEETNEKQTQAREAKFLKTALLIRLLAL 600 Query: 519 -------HKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAH 571 + + ++EMP+ VL +E G +D + L ++ + + A Sbjct: 601 HFASTLDDRKQTGLMTDLEMPISRVLRGMEDVGAAVDMQRLSGMLKQFSADAEFAQNMAW 660 Query: 572 EIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLE----ELALDYP---LP 624 ++AG NL S KQLQ ILFE G+KP ++T G+ +T+ E L+ +L + P Sbjct: 661 KVAGSSVNLQSPKQLQQILFEHFGLKPTRRTKNGSYTTNAEALQAMYVKLDPEEPASQFL 720 Query: 625 KVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNE 684 +L++R KLK L + R+HT++ Q + ATGRLSS DPNLQNIP RN Sbjct: 721 GALLKHRETNKLKQI-VQSLIDAAHYDDRRIHTTFEQTIAATGRLSSADPNLQNIPNRNA 779 Query: 685 EGRRIRQAFIAPEDYV-IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFG 743 GR IR AFI E++ ++S DYSQ+ELRIMAH S DK L+ AF G D H+ A+ V+ Sbjct: 780 AGREIRAAFIPGEEFEYLMSCDYSQVELRIMAHASHDKTLIEAFRSGVDFHKYVASLVYK 839 Query: 744 LPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYME 803 +P+E VT +QR KA+++GL YG+S +GLA+QL+I EA+ + YF+ + V +Y+E Sbjct: 840 IPVEQVTPDQRSHVKAMSYGLAYGLSTYGLAKQLSISPAEAEMLKNKYFDTFGNVHDYLE 899 Query: 804 RTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAV 863 ++AKE GY ET+ GRR Y P + S+N A R AAER A+NAP+QGTAADI+K AM+ V Sbjct: 900 SLVSKAKELGYTETMFGRRRYFPQLSSNNRASREAAERGALNAPIQGTAADIMKLAMLRV 959 Query: 864 DAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGEN 923 D L+ + R R+I+Q+HDEL+ E+ + V + + MEN LDVPL V G G + Sbjct: 960 DLGLREAKVRSRVILQIHDELILEISHGEQAQVENIVRKAMENAVHLDVPLSVSTGVGVD 1019 Query: 924 W-DQAH 928 W AH Sbjct: 1020 WQLAAH 1025 >UniRef50_C7LZ56 DNA polymerase I n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZ56_ACIFD Length = 886 Score = 769 bits (1986), Expect = 0.0, Method: Composition-based stats. Identities = 312/918 (33%), Positives = 456/918 (49%), Gaps = 69/918 (7%) Query: 19 YRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKTFRDELFEH 76 +RA++A P + +G T A++G +ML +++ Q +PTH AV DA+G TFRD + E Sbjct: 25 FRAFYALREPMMRTESGVATNALFGFASMLANVVAQTRPTHLAVALDAEGPTFRDAILES 84 Query: 77 YKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKAGRPVLIST 136 YK R P PDDLR Q++ +++A+G+P + SG EADDVI TLA A AG I T Sbjct: 85 YKGTRAPTPDDLRQQLDAARGLLEAIGVPAVEASGFEADDVIATLATRARDAGIATRIVT 144 Query: 137 GDKDMAQLV-TPNITLINTMTNTI----LGPEEVVNKYGVPPELIIDFLALMGDSSDNIP 191 GD+D+ QLV P I ++ T +V+ YGVPP D +L GDSSDN+P Sbjct: 145 GDRDLLQLVEDPLIVVLLTRKGVSNLEAFDEAKVLETYGVPPARYGDLASLRGDSSDNLP 204 Query: 192 GVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQLAT 251 GVPG+G KTA ALL ++ + A + ++ LEQ + + L Sbjct: 205 GVPGIGPKTAAALLDRFESIEGILAHLDALSA-------RQREALEQARSQLLEARLLTQ 257 Query: 252 IKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAKPQET 311 ++ DV + + L + L V + + A A Sbjct: 258 LRRDVAELPSLDALRLGPWDPRRAETLM-----------VGTFELRRPFQALVRAFEGRP 306 Query: 312 SVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGL 371 + DE P V + V L + + A + +L A D + +V L Sbjct: 307 TAGDEPPPVESP-------VAHLTDVSAAAVVERLAPGATVAVAATFAG-DPGRSRVVEL 358 Query: 372 SFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYD-RGILAN 430 + +E V A P DAP + AL + VG K R ++ Sbjct: 359 ALGVEGVVWAGSP-----EDAPTHL--WEALGSC---------VLVGAGPKEIVRSLVME 402 Query: 431 YGIELRGIAF-DTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQI 489 + + L A D + ++++S H +D LA RWL + Sbjct: 403 HAVPLEPRALVDLEVLGWLVDSADVAHGLDQLARRWLGRHLDDR-------------GPL 449 Query: 490 ALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDP 549 E A A + +V + + L + + ++E+PL VL+ +E +GV ID Sbjct: 450 EAEAAPLGARQWVEVVHPIREALERRLTEDD-LWRLATDVEIPLTRVLTDMEIHGVAIDR 508 Query: 550 KVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPST 609 VL EL + AG E N +S +QL +LFE+ G+ +KT G ST Sbjct: 509 DVLAAIGTELATERDRALAEVRHYAGGELNPNSPRQLAVVLFERLGLPAGRKTKTGY-ST 567 Query: 610 SEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRL 669 VLE L +P+ IL +R L KL ST+ + L I GR+H +++QAV TGR+ Sbjct: 568 DARVLESLRDAHPIVAAILRFRELDKLLSTFYEGLRSEIGA-DGRIHATFNQAVARTGRI 626 Query: 670 SSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAE 729 SS PNLQNIPVR +EG+R R AF+A E +V+V+ADYSQIELR++AHLS D+ L+ + Sbjct: 627 SSERPNLQNIPVRTDEGKRFRDAFVATEGHVLVAADYSQIELRVLAHLSGDEELVRILSG 686 Query: 730 GKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMD 789 D+H AA VFG+P E VT +QR AK + +GL YGM A+GLA++L +P EA+ + Sbjct: 687 DGDVHTLVAARVFGVPAERVTPQQRSVAKMVTYGLSYGMEAYGLAQRLGVPPAEAEGILA 746 Query: 790 LYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQ 849 +F +PG+ Y + + A+ QG+ TL GRR YLPD+ S N R AER A+NA Q Sbjct: 747 DFFAAFPGLRHYRDASVDAARAQGFTTTLLGRRRYLPDLDSPNRTVRQGAERQAMNAGTQ 806 Query: 850 GTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTR 909 G AADI K A++ + A L +++QVHDE+V E + V + ++E+ Sbjct: 807 GLAADIFKIALVRLHAALSPTDG--ALVLQVHDEVVVEAVAERAHDVRALVEDVLEHAFA 864 Query: 910 LDVPLLVEVGSGENWDQA 927 L VPL V+ G G +W +A Sbjct: 865 LRVPLRVQSGVGRSWGRA 882 >UniRef50_D2NTK8 DNA polymerase I n=2 Tax=Rothia mucilaginosa RepID=D2NTK8_9MICC Length = 1003 Score = 765 bits (1975), Expect = 0.0, Method: Composition-based stats. Identities = 334/1013 (32%), Positives = 487/1013 (48%), Gaps = 107/1013 (10%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLT---------NSAGEPTGAMYGVLNMLRSLIMQYKPT 56 L+L+DG S R++ + S G+ T A++ L+ L S+I +P+ Sbjct: 5 NKTLLLIDGHSLALRSFFGIYTMAEKTGQHIFVRSDGQHTEAVHAFLSTLLSIIKDNQPS 64 Query: 57 HAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADD 116 H AV FD G TFR + YK R +P+ QI+ + M+ A+ +P L EADD Sbjct: 65 HIAVAFDLPGGTFRTAEYGEYKGGRNAIPEAFNGQIDLIKKMLGALNIPALTYENYEADD 124 Query: 117 VIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN------TILGPEEVVNKYG 170 ++ TL R +AG VLI +GD+D+ QLVT ++TL+ +T + P V K Sbjct: 125 IVATLTRRGTEAGYKVLILSGDRDIFQLVTDDVTLLYPVTTGPSKGIQRMDPAAVEKKTK 184 Query: 171 VPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAK 230 VPP + D AL G+ +DN+PGVPGVG A L G L + +KI G Sbjct: 185 VPPHMYPDLAALTGEQADNLPGVPGVGPGFAAKWLGEYGSLQGVLDNRDKIGG------- 237 Query: 231 TMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTAD 290 L +N + + +L + D++L +T E P + L F + EF+ Sbjct: 238 KKGEALRENVDNVVRNRRLNQLVNDLDLNVTLEDTAFT-PDLDALNTFFDEVEFRTIRKR 296 Query: 291 VE--AGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEK 348 G ++A G+ A + + AP+ T Y I K A + Sbjct: 297 AADTLGPIVRAAGSAGATSSAAEAGEEGAPKKAPTGP---VYAPINTSAPTKNADAAAFR 353 Query: 349 APVFAFDTETDSLDNISANLVGLSFAIEPGVAAY----IPVAHDYLDAPDQIS------- 397 A A E D A + + +E V Y +PVA + + Sbjct: 354 AFCSAAAEENYGTDEQGA-PIAVPERLEGAVTLYPVTNLPVARPAIGDAPAVKVTKTKIR 412 Query: 398 ---------------------------RERALELLKPLLEDEKALKVGQNLKYDRGILAN 430 L L DE A K+ +LK R +L Sbjct: 413 AAEENPELLGVLLTSKSTSLWIDTRTIDPELDAALAAWLSDEAARKIVMDLKVQRKLLRA 472 Query: 431 YGIELRGIAFDTMLESYILN--SVAGRH----DMDSLAERWLKHKTITF--------EEI 476 YG EL G D L SY+ A R M+ LAER+L + E+ Sbjct: 473 YGYELAGAVEDPALSSYMCGFIPTATRKLFSERMEDLAERYLWIPKEPYAQLVFQPEEDE 532 Query: 477 AGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPV 536 A L ++ RY + + + +L + ++++H G L V+E IE+PL+ V Sbjct: 533 AEPSLFSLPGEAEPVDNL-RYFTQISRIIHELARLLHYEMEEH-GQLKVYEEIELPLLYV 590 Query: 537 LSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAG---------EEFNLSSTKQLQ 587 L+ +E+ G+ + +L + + R + ++ A I G E NL+S KQLQ Sbjct: 591 LADMEQAGIAVSDALLTELHDTFSARANQAQESARAIIGGEVATEDGEEPLNLASVKQLQ 650 Query: 588 TILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPK------VILEYRGLAKLKSTYT 641 T+LFE G+ +K G + +E V E L+ P + YR KL T Sbjct: 651 TVLFETLGLPHTRKIKSGYSTDAESVTELLSKISPESDGAAFLGALAAYRDNIKLAQT-V 709 Query: 642 DKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYV- 700 + L + GRVHT++ Q +TGRLSST PNLQNIP+R EEGRRIR AFI + + Sbjct: 710 EGLQKAA-TEDGRVHTTFQQGAASTGRLSSTAPNLQNIPIRTEEGRRIRGAFIVAPEPID 768 Query: 701 ------IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQR 754 +++ADYSQIE+RIM HL+ D+ L+ A+ G+D+HR +EVFG+ E VT EQR Sbjct: 769 GVEYEGLLTADYSQIEMRIMVHLAADEKLIAAYEAGEDLHRYVGSEVFGVAPEDVTPEQR 828 Query: 755 RSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGY 814 KA+++GL YG+S FGLA+QLNI EA + YF+R+ V ++ QA + GY Sbjct: 829 SKVKAMSYGLAYGLSRFGLAKQLNISSDEAGELRTNYFKRFGRVGRFLRGVLKQAHQDGY 888 Query: 815 VETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRV 874 ET+ GRR LPD+ S N RR AAERAA+NAP+QGTAADIIK AMI + L+ E + Sbjct: 889 TETIFGRRRVLPDLDSPNRVRREAAERAALNAPIQGTAADIIKIAMINIHRRLREEGLKT 948 Query: 875 RMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 RM++QVHDE++ EV + +A + + + M L VPL V+VG G++W +A Sbjct: 949 RMLLQVHDEIILEVATGEREAAERVLVEEMSGAASLRVPLDVQVGWGKSWQEA 1001 >UniRef50_Q2SRK9 DNA polymerase I n=4 Tax=Mollicutes RepID=Q2SRK9_MYCCT Length = 911 Score = 764 bits (1973), Expect = 0.0, Method: Composition-based stats. Identities = 281/956 (29%), Positives = 470/956 (49%), Gaps = 83/956 (8%) Query: 6 QNPLILVDGSSYLYRAYHAFPP------LTNSAGEPTGAMYGVLNMLRSLIMQYKP-THA 58 + +++VDG+S ++RA++A L +G T A+Y +NML S+I Q P H Sbjct: 2 KTKILVVDGNSLIFRAFYATAYSPNTSLLKTKSGVLTNAVYSFINMLLSVIHQRGPYDHI 61 Query: 59 AVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVI 118 + FD KTFR +L YK++R P++L Q + + + +EADD+ Sbjct: 62 LIAFDKGKKTFRHDLLSDYKANRIKTPNELVEQFSIVREFLTKANIQWFEQENIEADDIA 121 Query: 119 GTLAREAEKAGR--PVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVP 172 G++ + AEK I + DKDM QL+T + +N + + ++ K+ + Sbjct: 122 GSICKYAEKQFDNLQAEILSSDKDMYQLITNKVICLNPVQGVNELEEVDTNKLFEKWQIL 181 Query: 173 PELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTM 232 P + D+ A++GDSSDN+ GV G+G+K A L+Q L+ +Y E+I G + Sbjct: 182 PNQVPDYKAIVGDSSDNLKGVNGIGQKGAIKLIQQYQNLENIYNNLEQIKG-------AI 234 Query: 233 AAKLEQNKEVAYLSYQLATIKTDVELE-LTCEQLEVQQPAAEELLGLFKKYEFKRWTADV 291 KLEQ+K++A+L LATIKTDV LE + ++L + + KYE Sbjct: 235 KTKLEQDKKMAFLCKDLATIKTDVTLENFSFKKL---DFNVDNIYEFLNKYEMYSLKKRF 291 Query: 292 EAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPV 351 L Y N LD + +W E + Sbjct: 292 TNILNLDFN-------------------------PYQNKKQNLDVRIINSWSKDYEDSIN 326 Query: 352 FAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDY--LDAPDQISRERALELLKPLL 409 + E+ D ++G+ + G Y+ + L + + L + L Sbjct: 327 Y-LYVESLEEDYHKDKIIGIGISNNKG-NFYLDFKNKAQQLSFFEDTTLSSTDSLFEEFL 384 Query: 410 EDEKALKVGQNLKYDRGILANYGIEL--RGIAFDTMLESYILNSVAGRH--DMDSLAERW 465 + K ++K +L N+ + FD M+ Y LN+ + L + Sbjct: 385 NNSNLKKYTYDIKKTTYLLKNHKYNVLASNFDFDFMVACYSLNANVVSDLSNQIKLVDNL 444 Query: 466 LKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNV 525 ++ +TI +EI GKG + I L+ +Y ++ A + + ++ L K ++ Sbjct: 445 IELETI--DEIFGKGVKK--NPDIDLDIKSKYISKKAYLLKKYSDQLIEQL-KQTNTYDL 499 Query: 526 FENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEE----FNLS 581 + I+ PL+ VL IE G+ ID + L ++++ ++ +E + + EE FN S Sbjct: 500 YLKIDHPLIEVLYDIEVQGILIDKEQLKLQTQQILKKINHIEWQMKILVAEEIDNNFNFS 559 Query: 582 STKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYT 641 S KQ+Q +LF+K + L+ +TS+EVLE+L +P+ ++LE+R KL +TY Sbjct: 560 SPKQIQELLFDKLKLPNLE-----KGTTSKEVLEKLITYHPIINLLLEHRKYTKLYTTYL 614 Query: 642 DKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVI 701 I +VHT ++ +T TGRLSS+ PN+QNI +R+ E + +R+ FI + Sbjct: 615 KGFEKFIF-DDNKVHTIFNHTLTNTGRLSSSYPNIQNISIRDNEQKEVRKIFITNNNKTF 673 Query: 702 VSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAIN 761 +S DYSQIELR++A +S++ L+ AF + DIH A +F L + +TSEQRR AK N Sbjct: 674 LSYDYSQIELRVLAQMSKETNLINAFNQNADIHLQAAKLIFNLSDDQITSEQRRIAKVFN 733 Query: 762 FGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGR 821 FG++YG++ FGLA LN+ +A++ + Y+ +P +L++ E+ A +GY+ TL R Sbjct: 734 FGILYGLTDFGLASDLNMNVNQAKQMIKDYYSAFPSLLDFKEKQVEIATSKGYITTLSNR 793 Query: 822 RLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVH 881 R Y+ ++ S+N R +R A+N P+QGTA+DI+K AMI++ L+ + ++I Q+H Sbjct: 794 RRYINELNSTNHNIRQFGKRIAVNTPIQGTASDILKVAMISIYKKLKEQNLDAKIICQIH 853 Query: 882 DELVFEVHKDDVDAVAKQIHQLMENCTR---LD--------VPLLVEVGSGENWDQ 926 DE++ EV + ++ K + +EN LD V L V G+ W Sbjct: 854 DEIILEVDDNQLEQTKKIVVSELENALEKLFLDLNIKDQVVVKLKVGESVGKTWFD 909 >UniRef50_C1TPP4 DNA polymerase I n=2 Tax=Synergistaceae RepID=C1TPP4_9BACT Length = 854 Score = 762 bits (1968), Expect = 0.0, Method: Composition-based stats. Identities = 312/933 (33%), Positives = 460/933 (49%), Gaps = 90/933 (9%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + + P++ VDG +RA++A P LT G PT A+ G NML + ++ P +VVFD Sbjct: 1 MTEGPIMFVDGHGLAFRAFYAIPELTAPDGTPTNALVGFFNMLSKIKKEWAPQSLSVVFD 60 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 A GKTFR E+FE YK R P P++ + Q+ L M+ +G+P++ GVEADDVIG ++R Sbjct: 61 APGKTFRHEMFEEYKKGRKPTPEEFKVQLPILKKMLGLLGIPVICRPGVEADDVIGAVSR 120 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPELIIDF 179 E G PVL+ T DKDM Q++ IT+I E +YG PP + D+ Sbjct: 121 EYAYKGTPVLVVTSDKDMLQILDEGITVIRPGKGISSFNRWDAETFQGEYGFPPARMADY 180 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 LAL+GDS DN+PGVPG+G+KTA+ LL G L+ + A + KLE+N Sbjct: 181 LALVGDSVDNVPGVPGIGDKTARRLLGKYGDLEGILAHTADLTA-------GQRKKLEEN 233 Query: 240 KEVAYLSYQLATIKTD-VELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 ++A S L T+ D ++ L P ++ + L ++ + + Sbjct: 234 ADLARKSLILTTLSVDGAPDDV---DLVCGVPDSDGFIALCRELGMSSLERSMGDLICGE 290 Query: 299 AKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTET 358 + D + E A +S ++ +E L +L AF + Sbjct: 291 TSFSG-----------DSSVEKEAQSLSLVELKSVELDELL--MCDEL------AFHGKW 331 Query: 359 DSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVG 418 +S L + G + P ++S LE + D K L V Sbjct: 332 TGEYPMSLVADPLVVCSKDGRFW------SGSEMPFELSSW--LERGSVITSDYKRLLVA 383 Query: 419 QNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAG 478 + D +D Y+L+ HDM S+ T Sbjct: 384 MGVPSDY-----------SRVWDLRSVDYLLHPDKASHDMPSVMGDDCPEST-------- 424 Query: 479 KGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLS 538 E A +L + + +G V I+MPLVPVL Sbjct: 425 --------------------EERAMALWRLRDDL-SQTIESRGLSEVLYGIDMPLVPVLV 463 Query: 539 RIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKP 598 +E++G+K++ VL + +L RL + ++ AGE NL+S KQ+ +LFEK G+ P Sbjct: 464 SMEKSGIKLEEPVLQDVISDLKERLERIVEEITSAAGESINLNSPKQVGCLLFEKLGLPP 523 Query: 599 LKKTPGGAPSTSEEVLEELAL----DYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGR 654 +KKT G ST VLE+LA +P ++LE+R L+K+ S + L + G Sbjct: 524 VKKTKTGY-STDVTVLEQLAELPEPHNAVPSMLLEHRALSKMSSGFALPLMSSVC-GDGI 581 Query: 655 VHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE-DYVIVSADYSQIELRI 713 + +++ T TGRLSS DPNLQN+P E RI+ + I E V+ADYSQ+ELR+ Sbjct: 582 IRSTFESDTTGTGRLSSRDPNLQNLPAYGEWSDRIKSSLIPREKGRCFVAADYSQVELRV 641 Query: 714 MAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGL 773 +AH+S +K L F G+DIH TA+ VFG+ VT E RRSAK + FGL+YGMSAFGL Sbjct: 642 LAHISGEKRLADIFRSGRDIHTETASMVFGVDSSMVTKELRRSAKMVTFGLLYGMSAFGL 701 Query: 774 ARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNG 833 A++L + R EA + M YF PGV Y+ ++ +A +GY ETL GR L ++ + N Sbjct: 702 AKRLGVGRSEADRIMSRYFAALPGVEAYVTKSADEAIAKGYTETLFGRIRPLEEVVTGNT 761 Query: 834 ARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDV 893 R R AIN+P+QGTAAD+ K+AMIAV AE P V M++QVHD +V E ++ Sbjct: 762 RDRGHIRRVAINSPIQGTAADLAKKAMIAVSRSF-AEDPDVSMVLQVHDSIVCECPEERS 820 Query: 894 DAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 + V ++ ++M+N L VPL E G + + Sbjct: 821 EEVLAELQEIMKNVASLAVPLETEGKIGFSLAE 853 >UniRef50_D1Y4U0 DNA polymerase I n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y4U0_9BACT Length = 866 Score = 759 bits (1960), Expect = 0.0, Method: Composition-based stats. Identities = 295/933 (31%), Positives = 440/933 (47%), Gaps = 84/933 (9%) Query: 3 QIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 ++ ++L+DG +RA++A P L G PT A+ G NM + +P F Sbjct: 2 EMSGKKILLIDGHGIAFRAFYAIPELNAPDGTPTNALVGFFNMFARVRHDQRPDEIYAAF 61 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 D K TFR L+ YK+ R P P++ + Q+ LH M+ +G+ ++ VEADD+IG+ A Sbjct: 62 DMKEPTFRHRLYPEYKATRRPTPEEFKIQVPLLHEMLPLLGVHIMERPSVEADDLIGSAA 121 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI----LGPEEVVNKYGVPPELIID 178 + G VLI T DKD+ Q++ P + ++ KYG PP+ ++D Sbjct: 122 VQFASRGDEVLILTSDKDIMQVLRPGVKILRPGKGVSSFEEYDVPHFTEKYGFPPDTMVD 181 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 +L+LMGDS DNIPGVPGVGEKTA LLQ G ++ + ++ + K+E+ Sbjct: 182 YLSLMGDSIDNIPGVPGVGEKTASKLLQSYGSIEGIMEHAGELK-------PALQKKIEE 234 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQ--PAAEELLGLFKKYEFKRWTADVEAGKW 296 + A + +L +K D + ++ E + K+ + Sbjct: 235 HGAQAVANRKLTRLKCD----EDLSEFTSKEAAADLEAFGAFCARLGMKKAAESL----- 285 Query: 297 LQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDT 356 A++ + + A + +S + + + AP A D Sbjct: 286 -----GVTASQKERPAADPPAEAARPSPVSTGDDFGEAVPSAAAIPLDTILCAPRIALDL 340 Query: 357 ETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLED-EKAL 415 E V + E + + +A APD + L L P L++ Sbjct: 341 EESGA------PVPYTIKEETLQSRRVILA-----APDGSWWQGTLAELAPRLDELLDNR 389 Query: 416 KVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEE 475 V + K ++ G +D Y+L+ +D Sbjct: 390 VVCLDAKALCYLMER---PRLGGLWDVKTAWYLLHPDLESYD------------------ 428 Query: 476 IAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVP 535 I+ E + A L + M + + V I++PL+P Sbjct: 429 -------------ISKEIGLELSPGRALRLLAIARSMEEKIAA-QNMTRVMNEIDLPLIP 474 Query: 536 VLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG 595 L +ER G+++D + + S EL +L + +K +E AG E NL+S KQ+ +LFEK G Sbjct: 475 SLIGMERRGIRLDREKMLALSRELERQLNAITEKVYEAAGCEINLNSPKQIGELLFEKLG 534 Query: 596 IKPLKKTPGGAPSTSEEVLEELAL----DYPLPKVILEYRGLAKLKSTYTDKLPLMINPK 651 + +KKT G ST VLE+L +P +LEYR L K+ S + L L Sbjct: 535 LPVVKKTKTGY-STDVSVLEQLREICGARCEIPGQLLEYRELQKMASGFVQPL-LSAAGG 592 Query: 652 TGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIE 710 G +H+++ T TGRLSS DPN+QN+P + G+RIR+ I + +ADYSQIE Sbjct: 593 DGLIHSTFESLTTGTGRLSSRDPNMQNLPTYSGWGQRIRECLIPSQPGHCFAAADYSQIE 652 Query: 711 LRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSA 770 LR++AHLS D L+ F +DIH TAA +FGLP + VT E RRSAK ++FGLIYGMS Sbjct: 653 LRVLAHLSGDPQLIEIFNSDRDIHTETAAMIFGLPADAVTKELRRSAKTVSFGLIYGMSV 712 Query: 771 FGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKS 830 FGLA +L R A + MD YF PGV EYME ++ ++ E GY TL GRR + +I + Sbjct: 713 FGLASRLGTDRNTAFQIMDAYFAALPGVREYMETSKKKSLEFGYTSTLFGRRRPMDEIAT 772 Query: 831 SNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHK 890 N + +R AINAP+QGTAADI K AM V A V M++QVHD +V E Sbjct: 773 GNQTKDHQ-KRVAINAPIQGTAADITKIAMNKVAAHFAGR--DVAMVLQVHDSIVCECPH 829 Query: 891 DDVDAVAKQIHQLMENCTRLDVPLLVEVGSGEN 923 D + A ++ Q+ME+ L VPL E G + Sbjct: 830 DQAEQTALELSQVMESAVHLSVPLKTERTVGTS 862 >UniRef50_Q2GD93 DNA polymerase I n=2 Tax=Neorickettsia RepID=Q2GD93_NEOSM Length = 829 Score = 735 bits (1897), Expect = 0.0, Method: Composition-based stats. Identities = 295/924 (31%), Positives = 467/924 (50%), Gaps = 122/924 (13%) Query: 8 PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 L+++D ++L+ AY A P LT++ P GA+YG LN+L + KP + V D Sbjct: 4 TLMIIDAYNFLFSAYFALPNLTHNE-LPVGAVYGFLNILLKHLRT-KPEYLVVALDHGKS 61 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 TFR+ ++ +YK++RPP+P +L Q L V + L L + G EADDVI TL R+ K Sbjct: 62 TFRETIYNNYKANRPPVPGNLTPQFALLRECVDVLNLNPLEIEGFEADDVIATLVRKFSK 121 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSS 187 + + I + DKD+ QLV N+ +IN + N I+G EV K+GV P + DFL+L+GD+S Sbjct: 122 SDLKIKILSTDKDLMQLVNENVHVINPIKNRIIGVNEVKEKFGVFPTQMTDFLSLVGDTS 181 Query: 188 DNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSY 247 DNIPGVPG+G KTA LL G ++ +I+ + L ++ + LS Sbjct: 182 DNIPGVPGIGVKTAAKLLNTFGAIENF--RLNEIS------PARIKESLLRHHDQLTLSK 233 Query: 248 QLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAK 307 +L ++ D+ ++ + + + QQ +LL +KY FK + + Sbjct: 234 RLVSLVDDINIQCSLDCIRYQQQDGTKLLAFLEKYGFKNLIPKL------------VKST 281 Query: 308 PQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISAN 367 P++ ++ + AK E + E A+ Sbjct: 282 PKQLLHITKSTNKINDF----------------SLSAKYEGQITIYKNGEKTIFSTREAS 325 Query: 368 LVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQ--NLKYDR 425 ++G L +L+ L D K+ N+ Sbjct: 326 IIG------------------------------DLNMLQDLFTDRSIKKIFHSDNIP--- 352 Query: 426 GILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLT 485 + D + +Y LN++ D++ L +L + E K N+L Sbjct: 353 -----HPDPTNDSFEDLKVIAYPLNTLNT--DLEYLFSHYLGETSR---EAFHKRLNEL- 401 Query: 486 FNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGV 545 + K+ + K L ++ ++ PL+ + +E+NG+ Sbjct: 402 -----------------------YEKLCNAMFTEK-VLTLYYKVDKPLINAIKHMEKNGI 437 Query: 546 KIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGG 605 +D + L + S +++ +L E+E K +IAG+ F+L S KQL +LFE+ I KK G Sbjct: 438 SLDVEQLLSLSTQISGKLEEIESKIFDIAGKTFSLQSPKQLGKVLFEEMQIPVQKKLKSG 497 Query: 606 APSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINP--KTGRVHTSYHQA 662 ST EVL L++ Y + +L +R KLK+ Y D L L +NP + R+ T+Y Sbjct: 498 LSSTDNEVLTSLSIQGYEIADYLLSWRHYIKLKTAYIDPLLLKVNPNEEKHRISTTYSAT 557 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKG 722 +T TGRLSS++PNLQNIP + IR+ F A E + + ADYSQIELRI+A+++ + Sbjct: 558 LTLTGRLSSSNPNLQNIPRE----KEIRKIFTAKEGHHFLCADYSQIELRILAYIANVER 613 Query: 723 LLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRK 782 L A A G D+H TA+++F + +T + R AKA+NFG++YG++ FGL++QL I ++ Sbjct: 614 LKCALASGTDLHTLTASQIFKT--DKITPDLRNKAKAVNFGIVYGITNFGLSKQLAISKE 671 Query: 783 EAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERA 842 EA Y+ YF+ YP + YM R QA++ YV+T+ R+ + +I S+N AER+ Sbjct: 672 EAASYIQKYFDEYPEIKIYMNHIRNQARKDTYVKTMMNRKCPIQNINSNNRTISLVAERS 731 Query: 843 AINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQ 902 AINAP+QGTAADII+ AM+ + Q ++ M+MQVHDELVFE+ D + +AK+I + Sbjct: 732 AINAPIQGTAADIIRTAMVRMA---QEKELLSHMVMQVHDELVFELETDVIQQLAKKIKR 788 Query: 903 LMENCTRLDVPLLVEVGSGENWDQ 926 +ME +PLLVE+ G N + Sbjct: 789 IMEESH--GIPLLVELKHGPNLGE 810 >UniRef50_UPI00016C3887 DNA polymerase I n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3887 Length = 824 Score = 729 bits (1882), Expect = 0.0, Method: Composition-based stats. Identities = 285/825 (34%), Positives = 424/825 (51%), Gaps = 70/825 (8%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 + L+D +++ ++ P++ G PT A++GV L +L + + D + T Sbjct: 10 MYLLDAHGLIFQMFYGVGPMSAPDGRPTNAVFGVTRALMNLYDR-GADYLIATLDHEKPT 68 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR E+ YK+HR P P DL Q + +++AM +P L G EADDV+ T++ +A Sbjct: 69 FRVEIDAAYKAHRDPPPPDLLLQEPMIQQVMEAMRVPFLIAPGYEADDVMATVSTQAAAR 128 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTN-TILGPEEVVNKYGVPPELIIDFLALMGDSS 187 G V + T DKD QL+T + ++N + L V+ +GV P+ ++DF AL+GDS Sbjct: 129 GLDVFLCTSDKDCRQLITDKVKMLNLRKDYEALDAAGVLADWGVRPDQVVDFQALVGDSV 188 Query: 188 DNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL-- 245 D + GV GVG KTA LQ G LD L A ++ AG L+ L Sbjct: 189 DGVKGVAGVGPKTAAKWLQQFGTLDVLIANADQAAG-----GPKTRQALKDAVASGALAK 243 Query: 246 SYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEF-------KRWTADVEAGKWLQ 298 S +L + DV + E + + LL LF ++ F ++ A K Sbjct: 244 SKRLVCLDRDVPVAFDWEGWRRRDWDGQRLLELFHEFGFRGFAERVRKTLTRSGAQKNAD 303 Query: 299 A-----------------------------------------------KGAKPAAKPQET 311 A P A P ET Sbjct: 304 ALATAGLNAPPPVADTVGRGVPGAKAVPAKKAKGKSQKPAGPGLFDLLMEEAPGAVPTET 363 Query: 312 SVAD-EAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVG 370 ++ AP + SY Y +I E + ++ +L + P F FD ET LD + +VG Sbjct: 364 GASEPTAPAPISDGWSYSGYESITTPERFEQFVGELAQQPAFVFDLETAGLDPVHDPIVG 423 Query: 371 LSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILAN 430 SF+ + G A Y+PV + ++ + L LKP+ E+ K N+K+D +LA Sbjct: 424 YSFSWQKGTAYYLPVRAPAGEPV--LNPDTVLAALKPVFENPAIEKRNHNIKFDLIVLAA 481 Query: 431 YGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIA 490 G+EL G+A D+M+ Y+L+ A H +D L L+H I+ +E+ G GK Q+T ++ Sbjct: 482 SGVELAGVAGDSMVAHYLLDPGARAHGLDDLTLDELRHTNISIKELIGTGKKQITMAEVP 541 Query: 491 LEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPK 550 + YA EDAD LQL P L G +++ +E+PL+ VL+ +E G+++D Sbjct: 542 VARVRDYACEDADAALQLAAAFEPRLDAA-GLRELYDTLEVPLIRVLAEMEHVGIRVDVP 600 Query: 551 VLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTP-GGAPST 609 L ++ LA E H +AG FN+ S K+LQ ILF++ + K+T PST Sbjct: 601 FLVQLGVQMGEELAGYEGDIHALAGRAFNIGSLKELQKILFDELKLPVQKRTGIKNEPST 660 Query: 610 SEEVLEELAL-DYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGR 668 +E LE LA + LPK +L YR ++KLKSTY D LP + + K GRVHTS++QA TGR Sbjct: 661 DQESLERLAALGHELPKKLLAYRKVSKLKSTYVDVLPALAD-KNGRVHTSFNQASAETGR 719 Query: 669 LSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFA 728 LSS++PNLQN+P R E+G ++R+AFI + +V+V+ADYSQIELR++ H D L AFA Sbjct: 720 LSSSEPNLQNVPTRTEQGAQLRKAFIPRDGWVLVTADYSQIELRLLTHFCGDDTLRAAFA 779 Query: 729 EGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGL 773 E +D+H A AA++F +P VT QR AK +NFG++YGMSA GL Sbjct: 780 EDRDVHTAVAAQIFKVPEGEVTKAQRGVAKTVNFGVLYGMSATGL 824 >UniRef50_Q1AUF6 DNA polymerase I n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AUF6_RUBXD Length = 843 Score = 713 bits (1841), Expect = 0.0, Method: Composition-based stats. Identities = 304/925 (32%), Positives = 462/925 (49%), Gaps = 107/925 (11%) Query: 8 PLILVDGSSYLYRAYHAFP-PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 + L+DG S LYRA++A P + S+G PT A+YG +M+ L+ + VV+D Sbjct: 13 RVYLIDGYSLLYRAFYALPQSIATSSGLPTNALYGFTSMVLKLLDSDEELGIGVVWDGGL 72 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 FR E++ YK+ R MP++LR Q++ L +++AM +P++ V G EADDV+ T++R Sbjct: 73 PAFRTEVYPEYKAQRSAMPEELRVQLDHLDEILEAMNIPVVRVEGFEADDVLATVSRRLP 132 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLAL 182 + G + I TGD+D QLV + ++ T + G EV+ +YGV PE I D+ AL Sbjct: 133 E-GVELYIVTGDQDAMQLVDGRVRVLRTTRGVSETKVYGRREVMEEYGVSPEQIPDYKAL 191 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 +GD S + I G+ G K+ AA L Sbjct: 192 VGDPS-------------------------------DNIPGVRGIGPKSAAALLR----- 215 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 + + E L ++ E + +E G+ Sbjct: 216 -------------------------RFGSLEALYERLEEVEARGTRRKLEEGRENAFLSL 250 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 + A + V + + ++ +L ++ ++ PV Sbjct: 251 RLARMRFDAPVQFDPERLRFRGVAPGVRDVLLRRYEFRSLEPRIAGLPVSG----GGRPQ 306 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 SA V +E V + + A + ++ + + K Sbjct: 307 PESAVRV-----VEGEVEPSLEPVAVAPAGDGRWCAAVADDEVRLAGGLPERPLQVHDAK 361 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 G+ +RG FDT L Y+ G +D+D+LA + I+ E + Sbjct: 362 ---------GVGVRGAHFDTYLAGYLAKPGLGSYDLDALATE----RGISDVEASHADPV 408 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 + A DA++ + G ++ +E+PL VL+ +ER Sbjct: 409 VREAARRAALVRALAPRLDAEL-------------REMGLSRLYYEVELPLADVLAEMER 455 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 G+ +D + L E+ R+AELE+ E G FN+ S KQL +LFE+ G+ P+++T Sbjct: 456 VGMPVDARTLEEVGREIERRIAELEEAIFEDVGHPFNIGSPKQLSEVLFEELGLPPVRRT 515 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST +VL++LAL++P+ + I+ +R LAKLK TY + L ++ + GR+HT+ +Q Sbjct: 516 KTGY-STDAKVLQQLALEHPIAERIIAWRELAKLKGTYVEGLLKLV-GEDGRIHTTLNQT 573 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKG 722 TATGR+SS PNLQNIPVR E G RIR AF A ++V ADYSQIELRI+AH+SR+ Sbjct: 574 TTATGRISSDSPNLQNIPVRTETGMRIRDAFTASPGRLLVVADYSQIELRILAHMSREPA 633 Query: 723 LLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLN-IPR 781 L+ AF G+DIH TAAEVF + E+VT E RR AK +NFG++YG+S +GLA +L + Sbjct: 634 LVEAFKNGEDIHTRTAAEVFDVRPESVTPELRRRAKMVNFGILYGISGYGLATRLGNVHP 693 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 EA +Y+ YFER+P V E++ ++ A+A+E GY TL GRR Y+P++++ N R ER Sbjct: 694 AEADRYIQRYFERHPRVTEFIRKSLAEAEELGYATTLFGRRRYVPELRNKNKNVRKLGER 753 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 A NA +QG+AADIIK AM+ + L M+MQVHDELVF+V +D V+ VA Sbjct: 754 IAFNARVQGSAADIIKVAMVDLAPRLGP--LGADMLMQVHDELVFDVDRDRVEEVAALAA 811 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQ 926 + M LD PL VEV +GE W + Sbjct: 812 ERMVAAYDLDPPLEVEVKAGERWGR 836 >UniRef50_D1AV04 DNA polymerase I n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AV04_STRM9 Length = 861 Score = 705 bits (1821), Expect = 0.0, Method: Composition-based stats. Identities = 291/930 (31%), Positives = 472/930 (50%), Gaps = 84/930 (9%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 ++++D S+ +YRAY A NS GEP GAM G + L + + P + D K Sbjct: 2 KKILILDTSAIMYRAYFALMNFRNSNGEPVGAMLGFIKQLELALSYFSPEYVIAAKDVKR 61 Query: 67 KT-FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 R E+++ YK +R MPD+L Q++ + +++ G+P++ + EADDVI +++++ Sbjct: 62 AELKRREIYKEYKENRSGMPDELVMQLDAIDGILEGYGIPIIKIPSYEADDVIASISKKY 121 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTN-------TILGPEEVVNKYGVPPELIID 178 K ++I TGDKD+AQL+ PN ++ I E+V+ GV I D Sbjct: 122 SK-DYEIIILTGDKDLAQLINPNTSIALLGKKDENEPYKIIENDEDVIEYLGVKSYQIKD 180 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 L+GDSSD IPGV G+G KT L+ +D +YA + I G + K+ Sbjct: 181 LFGLIGDSSDGIPGVLGIGPKTGAKLIAEYDNIDNIYANIDNIKG-------ALQKKIIA 233 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 +K++AY+S +LAT+ +++++L E ++++ ++L ++ KYE ++ + K Sbjct: 234 SKDLAYISRELATVFDELDIDLNIEDAKIKEKDFDKLSEIYLKYELRKEYEKLVKDK--- 290 Query: 299 AKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTET 358 K + + S+ D ++ + Y+ Sbjct: 291 PKMDLKINEIEYPSLNDFITKINSVNEEISIYLGEE------------------------ 326 Query: 359 DSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVG 418 G++F + V ++ + + ++ R + D Sbjct: 327 -----------GIAFCNKDEVHYTFDISEEIGNLFEKGVSIRDI--------DSNLNVCI 367 Query: 419 QNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAG 478 + K N GI + FD +L S+ L + + ++++A L ++ EEI Sbjct: 368 YSGKE----WKNLGINFKN-YFDILLASFTLGTDKSQK-LETMAFDKLG---LSIEEIDK 418 Query: 479 KGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLS 538 K N+ +E +L L+K L+++ E VL Sbjct: 419 KILNKFDATSF-IEYRKNRLITMTYAIFKLKEVFMDLLEKE-NQLDIYLE-EKEFTDVLI 475 Query: 539 RIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKP 598 +E+ G+ I+ ++ EL ++ ++E K + +GE FN+SS KQL +LFE GI+ Sbjct: 476 YMEKQGIAINQNYFEKYNLELEKKIKDIENKIYIESGESFNISSPKQLGEVLFETMGIEG 535 Query: 599 LKKTPGGAPSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHT 657 +KK G ST EVLE L + +++LEYR L KLKSTY + L + GR+HT Sbjct: 536 VKKNKRGY-STDAEVLELLRDRGIKIAELLLEYRELVKLKSTYVEPLLKL--SINGRIHT 592 Query: 658 SYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHL 717 +Y+Q TATGRLSS++PNLQNIP R EG +IR+ FIA + +VS DYSQIELR++A + Sbjct: 593 TYNQTGTATGRLSSSNPNLQNIPTRTYEGTKIREGFIASKGMKLVSFDYSQIELRVLAEI 652 Query: 718 SRDKGLLTAFAEGKDIHRATAAEVFG-LPLETVTSEQRRSAKAINFGLIYGMSAFGLARQ 776 S+D+ L+ A+ D+H TA ++F E V+ QR AK INF ++YG + FGL+++ Sbjct: 653 SKDENLINAYKHNLDLHELTARKIFMLKDDEKVSKTQRNIAKVINFSVLYGKTPFGLSKE 712 Query: 777 LNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARR 836 L I +A+ Y++ YF+ YP V ++ +AK+ GYVET G R Y+ DI SSN + Sbjct: 713 LKITVSDAKLYINTYFKEYPKVRILLDDIIEKAKKDGYVETKFGTRRYVYDINSSNINIK 772 Query: 837 AAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAV 896 A+R A+N +QGTAA+IIK+ M + L + V+M++QVHDEL+FEV +D + Sbjct: 773 EQAKRMAVNTVIQGTAANIIKKVMKEIYDKLCND--NVKMLLQVHDELIFEVREDI--NI 828 Query: 897 AKQIHQLMENCTRL-DVPLLVEVGSGENWD 925 ++I +M+N DV L V G+NW Sbjct: 829 FEEIRDIMQNTIVFDDVVLKVNGSEGDNWA 858 >UniRef50_Q8I7W9 Mitochondrial DNA polymerase A n=2 Tax=Eukaryota RepID=Q8I7W9_DICDI Length = 1369 Score = 683 bits (1764), Expect = 0.0, Method: Composition-based stats. Identities = 276/1109 (24%), Positives = 466/1109 (42%), Gaps = 198/1109 (17%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKP-THAAVVFD- 63 + +L+DG+ Y+A P LTN G +YG + + +I + KP V FD Sbjct: 271 KKHTVLIDGTLMAYKANATTPSLTN-EGMNVNVLYGFMRSMLKVIDELKPIDSIVVCFDP 329 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 G +FR +L+ YKS+RPP P +L Q+ + + ++ + V G E DD++ T ++ Sbjct: 330 KGGSSFRRDLYPEYKSNRPPTPPELLQQLLLIPEVTDSINVAFTKVDGYECDDLLATYSK 389 Query: 124 EAEKAGRP----------------------VLISTGDKDMAQLVTPNITLINTMTNTILG 161 A + G V I T DKD+ QLV N+++ +T +++ Sbjct: 390 LATQEGNKFIEGNDQYDPTHPESNRFNGSQVTIVTDDKDIYQLVNDNVSVYSTRRGSMVD 449 Query: 162 PEEVVNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKI 221 + V++K+G P + F +L+GD DNIPG+P +GEKTA +++ G L+++ +++ Sbjct: 450 KQGVIDKFGFEPNKFVTFQSLIGDKVDNIPGIPRIGEKTATDIIKKFGNLNSIIENIDQL 509 Query: 222 AGLSFRGAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKK 281 + + + +SYQLA + +V + L + ++ + + K Sbjct: 510 PQ-------KFIEPIRSSIDQLRISYQLAKLNDNVSINLNLDDIKYKPIDRTKFYNFLDK 562 Query: 282 YEFKRWTADVEAGKWLQAKGAKPAAKP---------------------QETSVADEAPEV 320 Y F + VE L + + E DE Sbjct: 563 YNFTSIKSSVEKLNKLFSDNQEITTSTSTTNLETIKKNYSKVEFNYIDDENIKFDEISNE 622 Query: 321 TATVISYDNYVTILDEETLKAWIAKLEKAP--VFAFDTETDSLDNISANLVG------LS 372 + N + D ET + ++ L K A DTE +D + +G S Sbjct: 623 EINQLKPKNVTMVRDVETARMVVSILMKQKDRFHACDTEVIDIDLKKFSPIGHGKMICFS 682 Query: 373 FAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYG 432 P V + + ++D D I + L++ K EDE LKV N +DR I N+G Sbjct: 683 IYCGPQVKFHDGNSRVWVDVMDDIEGDEILQVFKEYFEDESILKVWHNYAFDRHIFYNHG 742 Query: 433 IELRGIAFDTMLESYILNSVA---GRHDMDSLAERWLKHKTITFEEIAG------KGKNQ 483 I ++G DT+ + + N+ G + +++L++ L + +++ G G+ Sbjct: 743 INVKGFGGDTLHMARLWNASRMNSGGYSLEALSKELLNKPKVPIKDLFGTRKIKADGEEG 802 Query: 484 LTFNQIALEEAGR----------YAAEDADVTLQLHLKMWPDLQKHKG-----PLNVFEN 528 + LE R Y++ D+++T L + L+ + + + Sbjct: 803 KSIVIPPLERIQRDSKFILNWIEYSSLDSELTWLLRENIHIKLRDMEWNQGTTMWDFYYL 862 Query: 529 IEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEK------KAHEIAGEEFNLSS 582 + P +L+ +E+ G+K+D L + E+ + E K K H E N S Sbjct: 863 MWRPFGHLLTEMEQRGLKVDIDYLKSLEEKAYTDMEENRKVFLNWAKTHSPDAENMNPVS 922 Query: 583 TKQLQTILFEKQGIKPLKK----------------------------------------- 601 Q+Q + F K K+ Sbjct: 923 DAQIQQLFFAPVQNKKTKESLPLEKDFECDNLDGTIEVGKTKPKKKKTFYLRGIGMESKS 982 Query: 602 -TPGGAPSTSEEVLEELALDYPL------------------------------------- 623 T G PS L ELA P+ Sbjct: 983 LTTNGWPSVDSSSLRELAGKNPIDGKYGSAYDFFVKSKNECYKDLPIEEREQMGREASIA 1042 Query: 624 PKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRN 683 +LE + L +T+ L + + + R+HTS + T TGRLSS PNLQN P Sbjct: 1043 INALLELGSIGTLLNTFIIPLQKLADSNS-RLHTSIN-VNTETGRLSSKKPNLQNQPALE 1100 Query: 684 EEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVF- 742 ++ +IR+AF ++ ADY Q+ELR++AH++ K ++TAF G D H TA ++ Sbjct: 1101 KDRYKIRKAFTCEPGNTLIVADYGQLELRLLAHITNCKSMITAFQVGGDFHSRTAMGMYP 1160 Query: 743 ------------------GLPL----ETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 G P + V + +RR AK +NF + YG +A GL++ + Sbjct: 1161 HVKEAIDRGEVLLEWDGEGEPPKPLLKNVYASERRKAKTLNFSIAYGKTAHGLSQDWGVT 1220 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 EA++ ++ ++E P VL + +T A + G+ TL GR LPDIK N + AE Sbjct: 1221 LNEAKETLNRWYEDRPEVLVWQRKTIETAHKYGWTRTLMGRYRQLPDIKG-NKGMKGHAE 1279 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 RA+IN P+QG AADI+ +AM+ ++ + ++ ++IMQ+HDEL+ E + D + Sbjct: 1280 RASINTPLQGGAADIVMKAMLIIEDNKRLKELGFKLIMQIHDELILEGPEQHADEARSIM 1339 Query: 901 HQLMEN--CTRLDVPLLVEVGSGENWDQA 927 LM N T L + L+V+ + W A Sbjct: 1340 MNLMSNPLTTPLLIDLVVDCRYAKTWYDA 1368 >UniRef50_Q9ZJE9 DNA polymerase I n=17 Tax=Helicobacter RepID=DPO1_HELPJ Length = 897 Score = 678 bits (1749), Expect = 0.0, Method: Composition-based stats. Identities = 286/935 (30%), Positives = 454/935 (48%), Gaps = 58/935 (6%) Query: 4 IPQNPLILVDGSSYLYRAYH---AFPPLTNSAGEPTGAMYGVLNMLRSLIMQYK--PTHA 58 I + L L+D +YL+R+Y+ PLTN G PTG + G++ M++ K P Sbjct: 6 IKEGTLALIDTFAYLFRSYYMSAKNKPLTNDKGFPTGLLTGLVGMVKKFYKDRKNMP-FI 64 Query: 59 AVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVI 118 +++ KT R E YK +R P ++ QI ++ MG + V G EADDVI Sbjct: 65 VFALESQTKTKRAEKLGEYKQNRKDAPKEMLLQIPIALEWLQKMGFTCVEVGGFEADDVI 124 Query: 119 GTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIID 178 +LA + I + DKD QL++ I L + T + ++ V KYG+ P D Sbjct: 125 ASLATL---SPYKTRIYSKDKDFNQLLSDKIALFDGKTEFL--AKDCVEKYGILPSQFTD 179 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 + ++GDSSDN GV G+G K A+ LLQ LG L+ +Y + L + M L Q Sbjct: 180 YQGIVGDSSDNYKGVKGIGSKNAKELLQRLGSLEKIYENLDLAKNL---LSPKMYQALIQ 236 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAA-EELLGLFKKYEFKRWTADVEAGKWL 297 +K A+LS +LAT++ E ++ K+Y F D+E ++ Sbjct: 237 DKGSAFLSKELATLERGCIKEFDFLSCAFPSENPLLKIKDELKEYGFISTLRDLENSPFI 296 Query: 298 QAKGAKPAAKP--QETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFD 355 + P T D AP+ + ++ + E L ++ KLE F Sbjct: 297 VENVPILNSTPILDNTPALDNAPKKSRMIV-------LESAEPLSMFLEKLENPNARVFM 349 Query: 356 TETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKAL 415 D ++ L+F ++ ++P+ S E +L+ Sbjct: 350 RLVLDKD---KKILALAFLLQDQ-GYFLPLEEALFSP---FSLEFLQNAFSQMLQHACI- 401 Query: 416 KVGQNLKYDRGILA-NYGIELRGIAF-DTMLESYILNSVAGRHDMDSLAERWLKHKTITF 473 +G +LK L Y + L I DT + +++ N + D + + +LK I Sbjct: 402 -IGHDLKPLLSFLKAKYQVPLENIRIQDTQILAFLKNPE--KVGFDEVLKEYLKEDLIPH 458 Query: 474 EEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPL 533 E+I K + + + + A + DL L + +IE P Sbjct: 459 EKI--KDFKTKSKAEKSELLSMELNALKRLCEYFEKGGLEEDL------LTLARDIETPF 510 Query: 534 VPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEK 593 V VL +E G KID +E L LE++ ++ G +FNL+S KQL +L++K Sbjct: 511 VKVLMGMEFQGFKIDAPYFKRLEQEFKNELNVLERQILDLIGVDFNLNSPKQLGEVLYDK 570 Query: 594 QGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTG 653 G+ + ST E+ L ++ +P +ILEYR L KL +TYT L L + K Sbjct: 571 LGLP-----KNKSHSTDEKNLLKILDKHPSIPLILEYRELNKLFNTYTTPL-LRLKDKDD 624 Query: 654 RVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIELR 712 ++HT++ Q TATGRLSS PNLQNIPVR+ +G IR+ FIA ++Y ++ DYSQIELR Sbjct: 625 KIHTTFIQTGTATGRLSSHSPNLQNIPVRSPKGLLIRKGFIASSKEYCLLGVDYSQIELR 684 Query: 713 IMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFG 772 ++AH S+DK L+ AF +G+DIH T+ +FG E + E+R AK+INFGL+YGM + Sbjct: 685 LLAHFSQDKDLMEAFLKGRDIHLETSKALFG---EDLAKEKRSIAKSINFGLVYGMGSKK 741 Query: 773 LARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSN 832 L+ L+IP EA+ Y++ YF+R+P + +Y+ R + + TL GR D N Sbjct: 742 LSETLSIPLSEAKSYIEAYFKRFPSIKDYLNGMREEILKTSKAFTLLGRYRVF-DFTGVN 800 Query: 833 GARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDD 892 + R +NA QG+A+D++K M+ V + P VR+++QVHDEL+FE+ + + Sbjct: 801 DYVKGNYLREGVNAIFQGSASDLLKLGMLKVSERFK-NNPSVRLLLQVHDELIFEIEEKN 859 Query: 893 VDAVAKQIHQLM-ENCTRLDVPLLVEVGSGENWDQ 926 + ++I +++ + L VPL + W++ Sbjct: 860 APELQQEIQRILNDEVYPLRVPLETSAFIAKRWNE 894 >UniRef50_D2QFD0 DNA polymerase I n=3 Tax=Bacteria RepID=D2QFD0_9SPHI Length = 1024 Score = 661 bits (1705), Expect = 0.0, Method: Composition-based stats. Identities = 277/618 (44%), Positives = 404/618 (65%), Gaps = 12/618 (1%) Query: 315 DEAPEVTATVIS-YDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSF 373 + PE T++S +Y + E + + L + FD+ET ++D + A+LVGLSF Sbjct: 415 ENQPERRKTILSVKHDYRLVDTAELRASLVHYLSQQESLCFDSETTAIDPVEADLVGLSF 474 Query: 374 AIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGI 433 A G A Y+PV D +A + ++ KP+ E+ KVGQNLKYD +L YG+ Sbjct: 475 AYRAGEAFYVPVPADRAEA------QAIVDQFKPVFENPTIEKVGQNLKYDLLMLKKYGV 528 Query: 434 ELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK-GKNQLTFNQIALE 492 E++G FDTM+ Y++ RH+MD +A +L + + E + GK GK QLT + ++ Sbjct: 529 EVQGKLFDTMIAHYLIEP-EMRHNMDMMAMTYLNYSPVEIEALIGKKGKGQLTMRDVDIQ 587 Query: 493 EAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVL 552 + YA EDAD+TLQL P L+K +F+ +EMPLV VL+ +E G+KID L Sbjct: 588 KVVDYAGEDADITLQLKHAFAPRLEK-DNLHKLFDQVEMPLVQVLTDLELEGIKIDTNAL 646 Query: 553 HNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG-IKPLKKTPGGAPSTSE 611 S L + + +++++ EIAGE FN+ S KQL +LF+K K KKT G +T E Sbjct: 647 SELSATLEVDMRQVQQEIFEIAGESFNIGSPKQLGEVLFDKLKLDKNAKKTKTGQYATGE 706 Query: 612 EVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSS 671 E+L +L ++ + + IL+YR L KLK+TY D LPL+I+ +TGR+HTS++QAV ATGRLSS Sbjct: 707 EILSKLEAEHEIARKILDYRELIKLKNTYVDALPLLISKRTGRIHTSFNQAVAATGRLSS 766 Query: 672 TDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEG 730 T+PNLQNIP+R G+ IR+AF+ ++VI+SADYSQIELRIMA S D+ +L AF G Sbjct: 767 TNPNLQNIPIRTPRGQEIRKAFVPRGPEFVIMSADYSQIELRIMAAFSGDQTMLEAFNNG 826 Query: 731 KDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDL 790 DIH TA++VF + L+ VTS+ RR AK INFG+IYG+S+FGLA++L IPRKEA + ++ Sbjct: 827 VDIHTQTASKVFHVGLDEVTSDMRRKAKTINFGIIYGISSFGLAQRLKIPRKEAGQIIEE 886 Query: 791 YFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQG 850 YF +P V +Y+++ +A+ GY ET+ GRR YL DI S N R AER A+NAP+QG Sbjct: 887 YFAGFPAVKDYIDQCIEKARGFGYAETILGRRRYLRDINSRNQTDRMFAERNAVNAPIQG 946 Query: 851 TAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRL 910 +AAD++K AMI + ++QAE+ + +MI+ VHDELVF+ H+D++D + ++ ++M+N + Sbjct: 947 SAADMLKIAMIQIHEFMQAERLKSKMILTVHDELVFDAHRDEIDLLRVRVDEIMKNAIPM 1006 Query: 911 DVPLLVEVGSGENWDQAH 928 V + +G+GENW AH Sbjct: 1007 GVKMETGIGTGENWLLAH 1024 Score = 346 bits (888), Expect = 2e-93, Method: Composition-based stats. Identities = 106/334 (31%), Positives = 169/334 (50%), Gaps = 16/334 (4%) Query: 5 PQNPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 P L L+D + +YRA+ AF P +S G T A++G +N + ++ + KPTH V F Sbjct: 4 PTKKLFLLDALALIYRAHFAFSKSPRISSRGINTSAVFGFMNAMIEVLTKEKPTHIGVAF 63 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 D+ KTFR E F YK++R P+D+ + + +V+AM +P+L + G EADD+IGT+A Sbjct: 64 DSAKKTFRHESFPMYKANRQSQPEDISVAMPYIKQIVEAMHIPMLILDGYEADDIIGTIA 123 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINT----MTNTILGPEEVVNKYGVPP-ELII 177 ++A A V + T DKD QLV +I + LG EV+ ++ + E + Sbjct: 124 KKAALADFEVYMMTPDKDYGQLVEEHIHIYKPAFMGKPAEKLGVTEVLERWQIERIEQVT 183 Query: 178 DFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLE 237 D L LMGDS DNIPG+PG+GEKTAQ L+ G ++ L A +++ G + + Sbjct: 184 DMLGLMGDSVDNIPGIPGIGEKTAQKLIADFGSVENLIARADELKG-------KLKENVV 236 Query: 238 QNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWL 297 + +S +LATI DV + E L + L L + EF++ + G + Sbjct: 237 NFAQQGLMSKELATIHLDVPVPFDEEHLRHTEYDKPRLAALLDELEFRQMKTRLLGGSYD 296 Query: 298 QAKGAKPAAKP--QETSVADEAPEVTATVISYDN 329 + P + ++ D + + + N Sbjct: 297 EKPLPTAFQAPGSAQMNLFDSPGGDSPAFLPFPN 330 >UniRef50_A6DML3 DNA-directed DNA polymerase, DNA polimerase I protein n=3 Tax=Bacteria RepID=A6DML3_9BACT Length = 1036 Score = 656 bits (1692), Expect = 0.0, Method: Composition-based stats. Identities = 276/702 (39%), Positives = 415/702 (59%), Gaps = 24/702 (3%) Query: 236 LEQNKEVAYLSYQLATIKTDVEL-----ELTCEQLEVQQPAAEELLGLFKKYEFKRWTAD 290 L +N E +++ + A K D+ L + E LE ++ L ++ W D Sbjct: 348 LGKNSEEIFIALKNAFNKCDLTLASENHTVIPEDLESKRKCT-----LTWEWLAATWLHD 402 Query: 291 VEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYD----NYVTILDEETLKAWIAKL 346 +E G A P + A A + + Y+ +Y + LKA + ++ Sbjct: 403 IELGLEQIASNHLPLIQEHLFLNAKFAELLATATVEYNSQRHDYNIVKSIPELKAVLDEI 462 Query: 347 EKAP-VFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELL 405 KA +FDTET LD SA +VGL AI A YIP D + +E L+ + Sbjct: 463 TKAKLPVSFDTETTGLDVRSATIVGLGLAIRDHHAWYIPFNSD-------LDKEEILKEI 515 Query: 406 KPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERW 465 KP D QN K+D +L GIE++ I FDT++ S+I N HD+DSL+ + Sbjct: 516 KPFFADSSLKFFAQNAKFDLQMLHYAGIEVKNIDFDTLVASFICNPSRQFHDLDSLSLHY 575 Query: 466 LKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNV 525 L ++ I+ E + GKGK Q++ + +E Y ED D+TL+L ++ +L + + N+ Sbjct: 576 LNYRKISTESLIGKGKKQISMADLPVERVATYCCEDVDITLRLRNELEAELHR-RDLRNL 634 Query: 526 FENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQ 585 F+ +++PL+PVLS++E NG+ I+ L S + + L + E++ H +AG EFN++S KQ Sbjct: 635 FDEMDIPLIPVLSKMENNGISINLGTLEKISSDFSAELKKCEEQIHALAGHEFNINSPKQ 694 Query: 586 LQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLP 645 + +LFE+ G+K KKT G STS EVLE LA + + + IL +R L+KL STY D LP Sbjct: 695 VGVVLFEEMGLKAGKKTATGY-STSAEVLENLAAESEIVRAILRHRTLSKLISTYADALP 753 Query: 646 LMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSAD 705 ++ R+HT + Q ATGRL+ST PNLQNIP R EG+ IR AF APE + +S D Sbjct: 754 KEVSELDQRIHTRFSQTTAATGRLASTQPNLQNIPTRTAEGKSIRSAFQAPEGHHFISCD 813 Query: 706 YSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLI 765 YSQIELRIMA LS+D GLL AF D+H TA+ VF L VT +QR +AKA+NFG++ Sbjct: 814 YSQIELRIMAELSQDPGLLEAFNNDFDVHTHTASLVFETELSEVTKQQRYAAKAVNFGIM 873 Query: 766 YGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYL 825 +G +GLA+++ + EA++++ YF+RYP V ++M + A+++GY ET GRR YL Sbjct: 874 FGQGPYGLAKEIGVSADEAKQFISNYFKRYPDVQKFMAKCVEDARDKGYSETSFGRRRYL 933 Query: 826 PDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELV 885 P++ SSNG R+ AER ++N+P+QGTAADIIK AMI V L+ Q + +M++Q+HDEL+ Sbjct: 934 PEMLSSNGRIRSGAERISVNSPIQGTAADIIKIAMIKVADELEKRQLKSKMLLQIHDELL 993 Query: 886 FEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 FEV D+++ + + I Q+M + ++ VPL V+ + ++WDQ Sbjct: 994 FEVPDDELEIMKELIPQIMTDIPQIKVPLKVDCAAAKSWDQC 1035 Score = 351 bits (901), Expect = 7e-95, Method: Composition-based stats. Identities = 106/365 (29%), Positives = 189/365 (51%), Gaps = 15/365 (4%) Query: 6 QNPLILVDGSSYLYRAYHAFP-PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 Q+ + ++D +Y++RA++ + + G PT A++G +N ++I + P+H VFDA Sbjct: 4 QSSIFVIDSMAYIFRAFYGIRANMHSKDGLPTNALFGFINSFENIIRDFNPSHVVAVFDA 63 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 +TFR+E++ YK++R P++L+ Q + + + G+PLL G EADD+I T+A++ Sbjct: 64 GSETFRNEMYSEYKANRKECPEELKPQFDLVKEYIALRGIPLLIQKGFEADDIIATVAKQ 123 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI-LGPEEVVNKYGVPPELIIDFLALM 183 A + +I +GDKD+ QLV + + +T N + + E+VV GV P+ I+D+L++ Sbjct: 124 ATGSHIKTVICSGDKDLMQLVNDDTLICHTHKNNLMIDAEKVVEIMGVRPDQIVDYLSIC 183 Query: 184 GDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVA 243 GDS+DNIPG+PG+G K A LL L+T+ A +KI G K + + + ++A Sbjct: 184 GDSADNIPGLPGIGPKGAAKLLAEFDNLETILASHDKIKG------KKQSETIREKADLA 237 Query: 244 YLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAK 303 LS L ++ ++ L+ + E+L QP + L +++ F R+ D+ K +K Sbjct: 238 TLSKSLVILQDEMTLDKSYEELVPSQPDFDGLADFYERMGFARFLRDLPNIKASYEGNSK 297 Query: 304 PAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDN 363 P K +S + + + + + A+ E F E L Sbjct: 298 PTLKQSLSSGG-------PVTLRVETFAPRPFQHEILKLNAEFESRLEFDVLAEMSHLGK 350 Query: 364 ISANL 368 S + Sbjct: 351 NSEEI 355 >UniRef50_Q057H2 5'-3' exonuclease domain of DNA polymerase I n=2 Tax=cellular organisms RepID=Q057H2_BUCCC Length = 886 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 311/922 (33%), Positives = 504/922 (54%), Gaps = 42/922 (4%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 + +I++DG LY+ Y +F L N G TG +YG + +L LI ++ P +VFD Sbjct: 2 KKKIIIIDGHYCLYQNYFSFIKLKNKNGSSTGVLYGYIRLLNKLIEKFNPKKIIIVFDTP 61 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 KT R +LF YK +R MP++L+ QI PL ++KA+ + ++++ +EADD+IGT++R Sbjct: 62 KKTNRHKLFTKYKKNRISMPNELKKQINPLKKIIKALNITIISIKKIEADDIIGTISRIF 121 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185 K + I + DKDM QL+ N+ +I +L ++ KYGV P+ I DFL L+GD Sbjct: 122 TKKKYYIFIYSADKDMTQLIKKNVFVIPGSIKKVLNKNDIFKKYGVYPKSIADFLCLVGD 181 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 SDNI GV G+G+KTA+ LLQ + +Y EKI+ L + K + LE+NK+ +L Sbjct: 182 FSDNIRGVLGIGKKTAKILLQSFSSIKKIYKNIEKISFLPIKNIKNIKKNLEKNKKNTFL 241 Query: 246 SYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPA 305 SYQL I ++EL ++ E + F+ Y+ + + + Sbjct: 242 SYQLTKINKNIELPKIHSIIKKNTLNIEFIKKKFEFYQLNEYLKKINDNTFSILNIYNKK 301 Query: 306 AKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNIS 365 K ++ E + + + + K EK F Sbjct: 302 KKMKKKHKYIEIVKKKILLKLINKIIKKKIFAISIYEKKKNEKKKKFY------------ 349 Query: 366 ANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDR 425 LS IE + IS ++ L+ L+P+LE+ K K+G+NLK Sbjct: 350 -----LSITIEKHETWWFIYKKKKN-----ISIKKILKYLRPILENNKYYKIGKNLKNVF 399 Query: 426 GILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLT 485 I Y I RGI FDT ++ + K ++ Sbjct: 400 HIFQEYNILFRGIHFDT-----------------TIINYYYKLNYKKNKKYQNLIYKYKK 442 Query: 486 FNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGV 545 + + +++ ++L+++ +++K F+ I+M L+P+L+ IE NGV Sbjct: 443 NKKEKSFKRKFIIMQESLISLKIYFLFKKNIKKK--KRENFQLIDMSLLPILAEIENNGV 500 Query: 546 KIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGG 605 I K+L + L +L+KK +I E+FN++S+KQLQ ILF+K + + KT G Sbjct: 501 LIKKKILKKQKKNHEKTLKKLKKKIFKITKEKFNINSSKQLQNILFKKFNLPKIYKTKLG 560 Query: 606 APSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTA 665 ST+E VL++L+ + LPK+IL++R + K+ +TY L IN KT R+HT+Y+Q T+ Sbjct: 561 NISTNEIVLKKLSKIHILPKIILQFRLIKKIINTYLRNLIKSINNKTNRIHTTYNQINTS 620 Query: 666 TGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLT 725 TGRLSS +PNLQNIP++ + GR++R AFI + +++++ADYS IELRI+AH S+DK L+ Sbjct: 621 TGRLSSKNPNLQNIPIKTKIGRKLRIAFITKKKWLLLTADYSHIELRIIAHYSKDKNLIK 680 Query: 726 AFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQ 785 + KDIH +TA+ +F PLE + R AK INF ++YG+S FGL+++LNI K+++ Sbjct: 681 DLLKNKDIHISTASHIFNKPLEKIKKYHRNIAKTINFSILYGISPFGLSKKLNISIKKSK 740 Query: 786 KYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAIN 845 + YF +Y + +++ T AK++GY++TL R+LY+P+I S N + +A+R IN Sbjct: 741 NLIYRYFLKYNKIKRFIKNTYKTAKKRGYIKTLFKRKLYIPNINSKNIYLKNSAKRFCIN 800 Query: 846 APMQGTAADIIKRAMIAVDAWLQAEQPR-VRMIMQVHDELVFEVHKDDVDAVAKQIHQLM 904 +Q TA+DIIK++MI + + + P+ +++IMQ+HDEL+FE+ + D + I ++M Sbjct: 801 LMIQNTASDIIKKSMITLHHLFKKKFPKDIKIIMQIHDELIFEIKEKKKDKIIDVIKKIM 860 Query: 905 ENCTRLDVPLLVEVGSGENWDQ 926 EN T+L +PL + G+NW + Sbjct: 861 ENNTKLIIPLYITTKIGKNWKE 882 >UniRef50_D1PTJ0 DNA-directed DNA polymerase I (Fragment) n=1 Tax=Prevotella bergensis DSM 17361 RepID=D1PTJ0_9BACT Length = 661 Score = 654 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 264/675 (39%), Positives = 378/675 (56%), Gaps = 29/675 (4%) Query: 8 PLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 L L+D + ++R+Y+AF P NS G T A+ G N L +I + PTH V FD Sbjct: 3 KLFLLDAYAIIFRSYYAFIKRPTINSKGLNTSAILGFCNTLNEIIEKENPTHIGVAFDY- 61 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 GKTFR E F YK+ R P+D++ + + ++KAM +P+L V+G EADDVIGTLA +A Sbjct: 62 GKTFRHEAFPPYKAQREATPEDIKLSVPHIQDILKAMHIPILQVNGFEADDVIGTLATQA 121 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILG---PEEVVNKYGV-PPELIIDFLA 181 + G + T DKD QL+ ++ + +E+ KYG+ +ID LA Sbjct: 122 AEKGIETYMLTPDKDYGQLIRQHVYMFRPRHGGGYDKIGEKEIQAKYGIASAAQVIDLLA 181 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGDSSDN PG PGVGEKTA L+ G + L +++ G M K+E + Sbjct: 182 LMGDSSDNYPGCPGVGEKTAVKLIHEFGTCENLIENSDQLKG-------KMREKVENAVD 234 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 +S LATI+TDV +EL ++L++ P EL +F + EF+R + Sbjct: 235 DIKMSKFLATIRTDVPIELNLDELKMTSPDEAELHKIFTELEFRRLAKKFLNKGEEKITS 294 Query: 302 AKPA-----AKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDT 356 P +T+ + + + +Y I ++E + L + + DT Sbjct: 295 DNLQLNLFEENPTKTTSEPKFSTFESLKTTSHHYKLIDNQEEARKLCDFLRTNKILSLDT 354 Query: 357 ETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALK 416 ET S + A LVGLSF+++ A Y+ + D +A + + + KPL ED + LK Sbjct: 355 ETTSTSPMEAELVGLSFSVKEKEAFYVAIPKDREEAL------QYVNIFKPLYEDPEILK 408 Query: 417 VGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEI 476 VGQN+KYD +L NYG++++G FDTML Y++ RH+MD +AE L ++T+ EE+ Sbjct: 409 VGQNIKYDYVVLRNYGVDIQGKMFDTMLAHYLIQPEL-RHNMDYMAETLLHYQTMHIEEL 467 Query: 477 AG-KGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVP 535 G KGK Q ++ EE YAAEDAD+TL+L + P L K G ++F +IEMPLV Sbjct: 468 IGPKGKGQKNMRDLSPEEIYEYAAEDADITLRLKNVLEPQL-KEVGAKSLFWDIEMPLVK 526 Query: 536 VLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG 595 VL+ +E NGV +D + L+ T R+ + E+ A E+AGEEFN+SS KQ+ ILF K Sbjct: 527 VLADMELNGVLLDTESLNEIERTFTERMQQYERHAFELAGEEFNISSPKQVGEILFGKMK 586 Query: 596 I-KPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGR 654 I KKT G TSEEVL +L P+ + IL YRG+ KL TY + LP +INP+TG Sbjct: 587 IVDKPKKTKTGQFVTSEEVLLQLKDKAPIVEDILNYRGMKKLLGTYVEALPKLINPRTGH 646 Query: 655 VHTSYHQAVTATGRL 669 +HTS++QAVTATGRL Sbjct: 647 IHTSFNQAVTATGRL 661 >UniRef50_C7N982 DNA polymerase I n=6 Tax=Leptotrichia RepID=C7N982_LEPBD Length = 1046 Score = 646 bits (1666), Expect = 0.0, Method: Composition-based stats. Identities = 293/1050 (27%), Positives = 478/1050 (45%), Gaps = 139/1050 (13%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 +++D S+ +YR++ A + NS+G TGA +G +N L S+I +++P + D K Sbjct: 2 KRAVILDTSAIMYRSHFALMGMRNSSGMSTGATFGFINTLESVIREFRPDYLVACLDVKR 61 Query: 67 KTF-RDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 R E YK+HR MP++L QI+ + ++ +P +G EADDVI T A + Sbjct: 62 DELERTGELETYKAHRESMPEELVMQIDTIMKVLDGYRIPKYKKAGQEADDVIATFATKF 121 Query: 126 E---KAGRPVLISTGDKDMAQLVTPNITLINTMTN-------TILGPEEVVNKYGVPPEL 175 V + TGDKD+ QLV I + I E+VV GV P+ Sbjct: 122 SNDADEQIEVFVITGDKDLTQLVDGKINIALLGKGDKNSAFKHIKTDEDVVEYLGVTPDK 181 Query: 176 IIDFLALMGDSSDNIP---------GVP---------GVGE-------KTAQALL----- 205 I D LMGD SD IP GV G+ E K + LL Sbjct: 182 IPDLFGLMGDKSDGIPGVAGIGPKNGVKLITTYGNLEGIYENIDEIKGKQKEKLLTDKEN 241 Query: 206 ---------------------------QGLGGLDTLYAEPE--------KIAGLSFRGAK 230 + L LY E + F Sbjct: 242 AFISRELATVKRELDVEYDKNKLKFEEKDFDSLLKLYEELNFKRFSKAVEEEKERFLQNG 301 Query: 231 TMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFK---------K 281 E+ K V + ++ K + E E++E Q+ ++ +F + Sbjct: 302 NQKELTEEEKLVLEKNKKITEEKLEKER-FEREKIEKQELEYDKENPIFDGISHFYEHVE 360 Query: 282 YEFKR---------------WTADVEAGKWLQAKGAKPAAKPQETSVADEAP-----EVT 321 YE + EA K Q + A K ++T + Sbjct: 361 YEHNSEIDKKIDEIQVLKEELAIEYEAQKKKQEEIALENQKTEKTKKIKDEKVYFEKNYG 420 Query: 322 ATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAA 381 V D Y I + A + + LD+ N++ + G Sbjct: 421 KVVSWNDAYSVIEKMDKKVAIFENMLGLSICDEKMNIVLLDSELKNILQNKNYEKSGAEV 480 Query: 382 YIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGIL-----------AN 430 I + + ++ ++ +E + LL +++ + N+K Sbjct: 481 QINLFSLGENTAEKEDNKKNIENIYKLLSEKEI--IAYNVKEYMKSGESEYFGYSVGGKT 538 Query: 431 YGIELRGI------AFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQL 484 YGI FD +L Y+L +++ + + TFEE K + + Sbjct: 539 YGINEERFGIKCTEYFDILLARYVL-GTESLQEIEEIILDEFGVEIATFEEQFKKERRKK 597 Query: 485 TFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNG 544 F+ ++ + + ++ +L + L +++ LN+F+ +E L+PVL+++E G Sbjct: 598 DFSDVSDDVVCEFLSKRTFFIYKLEIIFRNRL-QNEQFLNIFDKLESRLIPVLAQMEETG 656 Query: 545 VKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPG 604 +KID K EL ++ L+ +++A EFN+ S +QL +LFEK I KKT Sbjct: 657 IKIDKKYFSEFQNELEEKINMLQSDIYKLADGEFNIDSPQQLGEVLFEKLQIPSGKKTKT 716 Query: 605 GAPSTSEEVLEELALDYPLP-------KVILEYRGLAKLKSTYTDKLPLMINPKTGRVHT 657 G ST+ EVLE +A + L K +LEYR KL STY + +P + + + R+HT Sbjct: 717 GY-STNVEVLEMIANNRELTEDKRMIGKKLLEYRAYKKLLSTYIEPIPKLADKEE-RIHT 774 Query: 658 SYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHL 717 +++Q T+TGRLSS +PNLQNIPVR ++G RIR F++ E + ++S DYSQIELR++A L Sbjct: 775 TFNQNGTSTGRLSSANPNLQNIPVRTDDGIRIRTGFVSKEGHSLISFDYSQIELRVLAEL 834 Query: 718 SRDKGLLTAFAEGKDIHRATAAEVF-GLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQ 776 S+D+ L+ A+ + +D+H TA ++F + ++ +R AK INF ++YG + FGL+++ Sbjct: 835 SKDRHLVQAYQDNQDLHNLTARKIFFKTEEDEISRHERSIAKVINFSILYGKTPFGLSKE 894 Query: 777 LNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARR 836 L I +EA +Y+ YFE YP V ++++ AK G+VET G R Y+ I ++N + Sbjct: 895 LGITVQEASQYITTYFEEYPRVRKFLDIVTETAKLHGFVETFYGTRRYISGINATNKNVQ 954 Query: 837 AAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAV 896 A A R A+N +QGTAA+IIK+ MI + + ++ ++M++QVHDEL+FEV + Sbjct: 955 AQAVRMAVNTVVQGTAANIIKKVMIELHEEFKNDE-NIKMLLQVHDELIFEVRDEFAKEY 1013 Query: 897 AKQIHQLMENCTRL-DVPLLVEVGSGENWD 925 ++I ++MEN + VPL +NW Sbjct: 1014 MEKIEKIMENTVKFKKVPLKANGSVAKNWG 1043 >UniRef50_C1XI40 DNA polymerase I n=24 Tax=Bacteria RepID=C1XI40_MEIRU Length = 1273 Score = 604 bits (1558), Expect = e-171, Method: Composition-based stats. Identities = 263/764 (34%), Positives = 376/764 (49%), Gaps = 100/764 (13%) Query: 2 VQIPQ-NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 V++P+ + + LVDG YR+Y AF L S GEPT A++G L L L+ + V Sbjct: 14 VELPRPDRIWLVDGHHLAYRSYFAFEKLATSRGEPTQAIFGFLRTLLKLLKEDG-DCVIV 72 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 VFD +TFR + FE YK+ R PDD Q+E + +V MGL L V G EADDVIGT Sbjct: 73 VFDPPTRTFRHDAFEEYKAGRAATPDDFHPQLEKIKELVDLMGLQRLEVPGYEADDVIGT 132 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL 180 LA++AE+ G PV I TGD+D QL++ + ++ ++ P+ V KYGV +D+ Sbjct: 133 LAKKAEQEGYPVRILTGDRDSFQLLSEAVQVMLP-DGRLMHPQAVQEKYGVSVAQWVDYR 191 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 +L+GDSSDN+PG G+GEKTA LLQ G L+ LYA E ++ + A LE++ Sbjct: 192 SLVGDSSDNLPGAKGIGEKTAAKLLQEWGSLEGLYANLEALS-------PKIRASLEES- 243 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 + +V+L T + P + +F+ Sbjct: 244 ------------RDNVQLSRTLSLIHTDLPL---------ELDFRDCHRR---------- 272 Query: 301 GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDS 360 +P ++ + ++ I + L A A P D Sbjct: 273 ------EPDRGALREALEKLEFGSILRE---LNLLAAPPAAEEAPWPPPPEAFLGYTLDR 323 Query: 361 LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN 420 + AN +GL A G Y + +L+ LK E + Sbjct: 324 AQPMWANWLGL--AAYAGGKVYRG--------------QPSLQELKKFPEIRSMV----- 362 Query: 421 LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG 480 K + G+ + D ML +Y+ + D S R+ G G Sbjct: 363 AKDLSVLALKEGVWVP-PGDDPMLLAYLYDPSNS--DPASTVRRY------------GAG 407 Query: 481 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI 540 + G E A L + + ++ +++ IE PL VL+RI Sbjct: 408 ------------DWGSDPGERAQAAHTLWETLQSRIGENPKIEWLYQQIEKPLSAVLARI 455 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG-IKPL 599 E G+ ++ + L SEEL ++ LE + H +AG FN++S QL+ +L+++ P Sbjct: 456 EARGISLNAEYLLQLSEELAKEISYLEAEIHRLAGRSFNVNSRDQLEVVLYDELKLSAPG 515 Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 +KT G ST+ LEEL +P+ + IL YR L KLKSTY D LP +I+PKTGR+HT + Sbjct: 516 RKTQTGKRSTAASALEELLGQHPIIERILTYRELTKLKSTYLDPLPKLIHPKTGRLHTRF 575 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSR 719 +Q TATGRLSS DPNLQNIPVR E GRRIR+AF A +V ADYSQIELR++AHLS Sbjct: 576 NQTGTATGRLSSVDPNLQNIPVRTEIGRRIRKAFRAAPGMRLVVADYSQIELRVLAHLSG 635 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFG 763 D+ L+ F EG+DIH TAA +FGL + V +EQRR+AK + G Sbjct: 636 DENLINVFREGRDIHTQTAAWMFGLEPDKVGAEQRRAAKCLVEG 679 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 75/169 (44%), Positives = 109/169 (64%), Gaps = 2/169 (1%) Query: 759 AINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETL 818 INFG++YGMSA L+ +L+I EA+ +++ YF YP V E++ER A A++ GYVET+ Sbjct: 1106 TINFGVLYGMSAHRLSNELSISYAEAEGFIERYFASYPKVREWIERVLADARQTGYVETM 1165 Query: 819 DGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIM 878 GRR ++ D+ S + R AAER A N P+QGTAAD++K AM+ + L+ +++ Sbjct: 1166 FGRRRFVADLGSRVRSVREAAERMAFNMPVQGTAADLMKLAMVKLQPELEP--LEAHLVL 1223 Query: 879 QVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 QVHDEL+ E D +AVA + ++M+ L VPL V G GENW +A Sbjct: 1224 QVHDELLVEAPADKAEAVAGVVREVMQQAWALAVPLEVGTGIGENWLEA 1272 >UniRef50_C3XEZ4 DNA polymerase I n=3 Tax=Bacteria RepID=C3XEZ4_9HELI Length = 1102 Score = 536 bits (1381), Expect = e-150, Method: Composition-based stats. Identities = 216/644 (33%), Positives = 335/644 (52%), Gaps = 61/644 (9%) Query: 331 VTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAH--- 387 I D + L + + + K + AFD ET+ LD A++VG SF + A Y+P H Sbjct: 470 HLITDSKELFSLLESIPKGNLVAFDCETNGLDVREADMVGFSFCFDGLHAYYVPFLHGGI 529 Query: 388 --------------------------------------------DYLDAPDQISRERALE 403 D +AP QIS+ A + Sbjct: 530 KREKSKYEVMKSQSISQNLFSTEEAKPTFSLFDDTTMSKDSADNDTTNAPAQISQSDAKK 589 Query: 404 LLKPLLEDEKALKVGQNLKYDRGI-LANYGIELRGIAFDTMLESYILNSVAGRHDMDSLA 462 L+ L +G N+K+D I N+GI+ + D+ML +++ + +D+L Sbjct: 590 ALEILF---SYPLIGHNIKFDLHIAWHNFGIKPKHTPQDSMLLAWLDDPSQSV-SLDNLM 645 Query: 463 ERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGP 522 ++ H I F +I K + TF+ I ++ A YAAEDA T QL+ L H Sbjct: 646 KKHFNHNMIAFSDIVPK---KATFDSIDIKTASNYAAEDAAATFQLYFYFKNTLYPH--L 700 Query: 523 LNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSS 582 + +++E P + L +E G+ I+ N + L +L+++ +E AG FNL+S Sbjct: 701 FTLAKDLEFPFIRTLCAMEDCGIAINYSYFKNLKTTFSHTLQQLQQEIYEKAGVSFNLNS 760 Query: 583 TKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTD 642 KQ+ ILF+ + +K G ST E L L +P+ ++LEYR + KL STY + Sbjct: 761 PKQVAEILFDTLKLDTKRKGKSGY-STDEATLLALKDSHPVVPLLLEYREIFKLFSTYIE 819 Query: 643 KLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIV 702 + L + R++T++ Q T TGRLSS PNLQNIPVR+E GR IR+ F++ + Y ++ Sbjct: 820 PI-LKLGKNENRIYTTFLQTGTNTGRLSSKSPNLQNIPVRSEMGRSIRKGFVSRDGYKLL 878 Query: 703 SADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINF 762 S DYSQIELR++AH S DK LL +F DIH TA +F + S R AK+INF Sbjct: 879 SLDYSQIELRLLAHFSGDKVLLESFHNNADIHAETAKLLFKDSNKDF-SLLRSIAKSINF 937 Query: 763 GLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRR 822 GLIYGM A L++ LNI + EA++Y++ YF +P V +++E + + GY TL GR+ Sbjct: 938 GLIYGMGARKLSQTLNITQTEAKQYIEDYFATFPSVKQFLESQKDSILKNGYSSTLLGRK 997 Query: 823 LYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHD 882 Y D S+ RA R +N QG+AAD+IK +M + +++ M++QVHD Sbjct: 998 RYF-DFFSATEFMRANFLREGVNTIFQGSAADLIKLSMNEIYKKIESLDNDCFMLLQVHD 1056 Query: 883 ELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 EL+FE+ +++++K++ ++MEN +L VPL+ + G W + Sbjct: 1057 ELIFEIKDSIIESLSKELKEIMENIYKLKVPLVCNLSIGNTWAE 1100 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 120/499 (24%), Positives = 211/499 (42%), Gaps = 45/499 (9%) Query: 3 QIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 Q + +ILVD + +R+Y+A PPL NS PT + G ++ +L ++K + Sbjct: 2 QNTLSKVILVDTFGFFFRSYYALPPLHNSKHFPTSLLTGFATLIFNLYKEHKDSCIIFTL 61 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 + G R E + YK++R P DL AQ+ ++ MGLP L++ G EADD I TLA Sbjct: 62 EGGGTNRRKEFYPQYKANRKESPQDLLAQLPVAIEWLEKMGLPTLSLQGYEADDCIATLA 121 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLAL 182 A+K G I + DKD+ QL++ I + + + +E K+GV P I + ++ Sbjct: 122 TLAKKDGYETQIISHDKDLYQLISEGIYIFDYAKKQAITQKECYEKFGVLPNDFIMYQSI 181 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEK-IAGLSFRGAKTMAAKLEQNKE 241 +GDSSDN+PG+ G+G K AQ++L L++LY EK + K A ++++KE Sbjct: 182 VGDSSDNVPGIKGIGPKGAQSILAHFKSLESLYESIEKDYENIVSLLGKRTAGLIKEHKE 241 Query: 242 VAYLSYQLATIKTDV--ELELTCEQLEVQQPAAEELLGLFKKYEFKRWTA---------- 289 A++S L T++TD+ + ++ E + + + YE R Sbjct: 242 QAFISRNLVTLRTDLLQNYDFLSKKNEFETSPLLTIKDELESYELHRILQKILPRRKNNT 301 Query: 290 ---------DVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDE-ETL 339 D+ A + Q G + A ++P T V + D+ + + Sbjct: 302 QHVETIPLGDIGANPFEQRAGFRSQNSGDSKENASQSPTPTQVVKNLDSISCHTEPLGEV 361 Query: 340 KAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRE 399 AK + + +D DS++ A PVAH LD ++ Sbjct: 362 SNMKAKSDISTSSQYDNHLDSINY-----------------ALNPVAHPNLDWNLDSTKM 404 Query: 400 RALELLKPLLEDEKALKVGQ-NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDM 458 +P L + + + + I +D L ++ ++ Sbjct: 405 HPKPCTRPDLIENLDSNICHVECSETSSMESKRDISCLRTQYDNNLAAH----TNLTQNL 460 Query: 459 DSLAERWLKHKTITFEEIA 477 + +++ H +E+ Sbjct: 461 QNPTFQYIPHLITDSKELF 479 >UniRef50_C0X9C2 Possible DNA polymerase I (Fragment) n=3 Tax=Firmicutes RepID=C0X9C2_ENTFA Length = 431 Score = 517 bits (1333), Expect = e-145, Method: Composition-based stats. Identities = 207/433 (47%), Positives = 290/433 (66%), Gaps = 5/433 (1%) Query: 497 YAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHS 556 + A L K+ +L K ++F +E+PL +L +E G+++D L Sbjct: 1 HLARKIKAIQFLTSKLDSEL-TEKNQADLFYKMELPLSRILGDMEITGIRVDATRLKEMQ 59 Query: 557 EELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEE 616 E + RL E+E+K + AGEEFNL+S KQL ILFEK G+ +KKT G ST+ +VLE+ Sbjct: 60 VEFSERLKEIEEKIYAEAGEEFNLNSPKQLGVILFEKMGLPVIKKTKTGY-STAVDVLEQ 118 Query: 617 LALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNL 676 L P+ IL YR +AK++STY + L +I P ++HT Y Q +T TGRLSS DPNL Sbjct: 119 LKEQAPIVADILTYRQIAKIQSTYVEGLLKVIQP-DNKIHTRYVQTLTQTGRLSSVDPNL 177 Query: 677 QNIPVRNEEGRRIRQAFIAPED-YVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHR 735 QNIP+R EEGR+IR+AF+ ED ++I S+DYSQIELR++AH+S D+ L AF EG+DIH Sbjct: 178 QNIPIRLEEGRKIREAFVPREDNWLIFSSDYSQIELRVLAHISNDEHLKEAFVEGQDIHA 237 Query: 736 ATAAEVFGLPL-ETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFER 794 +TA VFG+ E VT RR AKA+NFG++YG+S +GL++ L I RK+AQ+Y+D YFE+ Sbjct: 238 STAMRVFGVEKAEDVTPNMRRQAKAVNFGIVYGISDYGLSQNLGITRKQAQQYIDTYFEK 297 Query: 795 YPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAAD 854 YPGV +YME AK++GYVETL RR YL DI S N R+ AER AIN P+QG+AAD Sbjct: 298 YPGVKQYMEEIVRDAKDKGYVETLYHRRRYLSDINSRNFNLRSFAERTAINTPIQGSAAD 357 Query: 855 IIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPL 914 I+K AMI + L+ E+ + M++QVHDELVFEV + +++ + + + ++ME+ L VPL Sbjct: 358 ILKIAMIEMARRLKEEKLQATMLLQVHDELVFEVPESELEQLNQLVKEVMEHAVSLHVPL 417 Query: 915 LVEVGSGENWDQA 927 + + G+ W +A Sbjct: 418 ITDSSWGKTWYEA 430 >UniRef50_Q72ES3 DNA polymerase I n=3 Tax=Desulfovibrio vulgaris RepID=Q72ES3_DESVH Length = 1015 Score = 514 bits (1325), Expect = e-144, Method: Composition-based stats. Identities = 198/509 (38%), Positives = 296/509 (58%), Gaps = 34/509 (6%) Query: 427 ILANYGI--ELRG-IAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQ 483 +L ++ I ++ G FD L +Y+L+ + LA RW + + Sbjct: 534 LLRSHAIWRDIPGDRWFDLGLAAYLLDPEERDYGWPRLAARWGDMLDRSTD--------- 584 Query: 484 LTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERN 543 +ALE A A A +L + +E+PLVPVL+ +E Sbjct: 585 -NPGLLALEMAQGMAGRLAGASLD----------------TLMRTLELPLVPVLADMEEA 627 Query: 544 GVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTP 603 G+ +D +E+ L + ++ ++ AG +FN+ S +QL +LF G+ + KT Sbjct: 628 GIAVDRTAFAAFLDEVQHELDRITQEVYKAAGGQFNIRSAQQLGELLFGTLGLPTVGKTR 687 Query: 604 GGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAV 663 GG +TS++ LE+L+ +P+ +IL++R L KL+STY + LP +++ GR+H++++Q Sbjct: 688 GGQATTSQDALEKLSGRHPVVDLILDFRKLEKLRSTYLEPLPKLVDAA-GRIHSTFNQLA 746 Query: 664 TATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGL 723 TATGRLSS++PNLQNIP R + GRR+R F A E ++VSADYSQIELR++AH+S+D L Sbjct: 747 TATGRLSSSNPNLQNIPARGDLGRRMRSCFTAAEGNLLVSADYSQIELRVLAHMSQDPTL 806 Query: 724 LTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKE 783 L AF EG DIHR TA ++ E VT +QRR+AK INFGLIYGM L ++L I E Sbjct: 807 LAAFREGADIHRRTAGLLYDTAPEDVTPDQRRNAKTINFGLIYGMGPQKLGQELRITVNE 866 Query: 784 AQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAA 843 A+++++ YF R + + + A A+EQG+V TL GRR LP++ S N R+ A R A Sbjct: 867 AKQFIERYFSRLQHLRNFYDNVEAAAREQGHVTTLAGRRRLLPEMHSENTQLRSQARRQA 926 Query: 844 INAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQL 903 IN +QG+AADIIK AM+A + R+I+QVHDEL+ EV + + A +++ L Sbjct: 927 INTLIQGSAADIIKLAMLAAHDDPVLHGLKARLILQVHDELMLEVPEANAQAAGERLALL 986 Query: 904 MENC----TRLDVPLLVEVGSGENWDQAH 928 M LDVPLLV+ G+G++W AH Sbjct: 987 MSEVRPGGVTLDVPLLVDWGAGKDWGSAH 1015 Score = 323 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 106/329 (32%), Positives = 162/329 (49%), Gaps = 13/329 (3%) Query: 5 PQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 Q PL L+DGS++++R ++AF + S G PT A++ V +L L+ + KP H A V D Sbjct: 10 TQEPLWLMDGSAFIFRGFYAFQNMQRSDGFPTNALFIVTRILLRLLREEKPRHFAFVLDG 69 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 KG TFR +LF YK+ R P+ L Q+EP+ MV A+GLPL G EADD I +LA Sbjct: 70 KGPTFRHDLFPLYKAQRAATPEPLVQQLEPIRRMVTALGLPLEVSDGCEADDCIASLAAR 129 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTN--TILGPEEVVNKYGVPPELIIDFLAL 182 RPV+I DKD+ Q + PN+ L + + + G+ P D A+ Sbjct: 130 YRDE-RPVVIIGADKDLKQCLHPNVVLWDPGAKEEKLTTLASFTAETGLTPAQWPDVQAV 188 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 +GD+SDNIPG+PGVG KTA + L+ + +++ + K EQ+ + Sbjct: 189 IGDTSDNIPGIPGVGPKTASKIFADFPTLEDIRDGFDRL-------PPNLQKKFEQHLDA 241 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEA---GKWLQA 299 +L QL T+ D +LT E+L VQ A +++E + + ++ +Q Sbjct: 242 MFLYRQLTTLAIDRCADLTPERLSVQPLDARTASTFLQEFELRALSRELAGMVRNGHVQV 301 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYD 328 A+ P +T + S Sbjct: 302 ALPGDASAPMDTGAMAAPAAPSTPRPSDS 330 >UniRef50_D0YSZ1 DNA polymerase I n=6 Tax=Actinobacteridae RepID=D0YSZ1_9ACTO Length = 1040 Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats. Identities = 222/563 (39%), Positives = 308/563 (54%), Gaps = 36/563 (6%) Query: 398 RERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHD 457 R + +L+ E V N K R L YG EL G D L Y+ + A R Sbjct: 482 RPESENVLRDFFAAENRTVVVYNAKALRHALRAYGWELSGTVRDVNLLDYLADPDASRLK 541 Query: 458 MDSLAERWLKHKTITFEEIAGKGKNQLTFNQ--------------------------IAL 491 ++ ER L GK Q+ F+ I L Sbjct: 542 FAAVTERLLGWSIDEKPSDIGKISEQMAFDLGWGNVTDAAGAAAVAASTGSKDISGGIPL 601 Query: 492 EEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNV--FENIEMPLVPVLSRIERNGVKIDP 549 A L L L M P L + V ++E+PL +L R+E G+ +D Sbjct: 602 PSLPETLVNQAKYALSL-LDMLPILTEQVEYRRVGSLLDMELPLSRLLERMEDTGIAVDE 660 Query: 550 KVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPST 609 +L +EL+ + E A E G E NLSS KQLQ +LF + G+ P +KT G +T Sbjct: 661 GLLQRFDQELSSEVKRTEAAAFEAIGREVNLSSPKQLQDVLFNQLGLPPTRKTKTGY-TT 719 Query: 610 SEEVLEELALD--YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATG 667 + LEELAL +P + +L +R +KL + GR+HT++ Q V ATG Sbjct: 720 DAKALEELALYNPHPFLQALLYFRDRSKLLQVVRN--LGDRIASDGRIHTTFGQTVAATG 777 Query: 668 RLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYV-IVSADYSQIELRIMAHLSRDKGLLTA 726 RLSS DPNLQNIP R ++G RIR+ FIA +V +++ADYSQIE+RIMAHLS D+GL+ A Sbjct: 778 RLSSLDPNLQNIPARTDDGARIRETFIAQMPFVSLMTADYSQIEMRIMAHLSGDEGLIAA 837 Query: 727 FAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQK 786 F G+D+HR+ AA VFG+ E VT+ QR KA ++GL YG+SAFGLA QL I + EA+ Sbjct: 838 FKSGEDLHRSVAALVFGVAPEAVTATQRTHVKATSYGLAYGLSAFGLAGQLRISQGEAKH 897 Query: 787 YMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINA 846 M+ YF R+ V +Y+E ++A+ GY ET+ GRR YLP ++++N A RAA+NA Sbjct: 898 LMETYFSRFGAVRDYLEHIVSEARRVGYTETMWGRRRYLPGLRATNRVVAENARRAALNA 957 Query: 847 PMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMEN 906 P+QG+AAD++K+AM+ VDA + A R+++Q+HDELVFEV +VDA+ + + + M + Sbjct: 958 PIQGSAADLMKQAMLRVDAAMAAAGLGSRILLQIHDELVFEVAPGEVDALRRVVTEAMTS 1017 Query: 907 CTRLDVPLLVEVGSGENW-DQAH 928 L VPL V VG G NW AH Sbjct: 1018 VVELRVPLEVSVGVGANWRAAAH 1040 Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats. Identities = 118/450 (26%), Positives = 196/450 (43%), Gaps = 39/450 (8%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPP--LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 + L+++DG S +RA+++ PP + G T A++G ++ML +++ + KPTH Sbjct: 1 MSDLRLLVLDGHSLAFRAFYSRPPENFRTTTGVYTNAVHGFMSMLLAMLRREKPTHIGAA 60 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 FD +FR +++ YK R P + QIE + ++ A+G+ L + VEADD++ TL Sbjct: 61 FDLSRHSFRTDIYPDYKGGRAETPPEFLGQIENIQRLLDALGIKWLTMENVEADDILATL 120 Query: 122 AREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELII 177 A + + G VL+S+GD+D QL+ + T++ N T + P+ V +KYGV P Sbjct: 121 ATQGKAQGMQVLVSSGDRDTFQLIDESTTVLYPGHNAAQTTRMTPQAVKDKYGVWPAQYP 180 Query: 178 DFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLE 237 + AL+G+ +DN+PGVP VGEK+A A + GGL+ + A ++ G L Sbjct: 181 EVAALVGEKADNLPGVPLVGEKSAAAWINQYGGLEGILAHRGELKG-------KRGENLR 233 Query: 238 QNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWL 297 + + + +L ++TD+ L L + L + + + + EFK A + Sbjct: 234 AHVDDVLRNRELNRLRTDLHLPLQLDDLRWRGMDVSAVDAVCAELEFKEMRRQFLAFFGV 293 Query: 298 QAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTE 357 + P + S V +D + ++ A Sbjct: 294 SGGASGSM------------PGFASPGFSGGVGVDSVDTGAVDMSASRGASRDSLAEPQP 341 Query: 358 TDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALK- 416 SLD S + F IEP PV H L L + E E A+ Sbjct: 342 EASLDFGSRH----GFGIEPH-----PVIHRLESDFQAGELREWLGLGQAPHESEIAVWA 392 Query: 417 ---VGQNL-KYDRGILANYGIELRGIAFDT 442 +G N D LA + G +T Sbjct: 393 VGNIGVNAPSIDWLFLAKHVAIPEGTTGET 422 >UniRef50_A5D075 DNA polymerase I-3'-5' exonuclease and polymerase domains n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D075_PELTS Length = 751 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 219/721 (30%), Positives = 344/721 (47%), Gaps = 76/721 (10%) Query: 261 TCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAG------KWLQAKGAKPAAKPQETSVA 314 + E Q + + +R A VE G + G + K +E +A Sbjct: 41 SWEDRWKQIFGMSKFKSGLDRQRAERVKAAVENGVLGMDVPPEKITGKLVSEKFRELELA 100 Query: 315 DEAPEVTATVISY-DNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSF 373 ++ ++ + S DNY I E+ KA +A L P FAFDTET +D +VG+S Sbjct: 101 EKNEKIAKLLKSKPDNYRLIQTEDQFKALLADLRHEPAFAFDTETTGVDVYQDVIVGVSL 160 Query: 374 AI-EPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYG 432 + G YIPVAH+ +A Q+ R L LK L D KV N K+D +L +G Sbjct: 161 TLPRAGYHVYIPVAHN--NAGPQLRRSYVLNGLKRYLTDPTVGKVLHNAKFDIHMLLRHG 218 Query: 433 IELRGIAFDTMLESYILNSVAGRHDMDSLAERW-----LKHKTITFEEIAGKGKNQLTFN 487 + +RG+A DTM+ ILN + +LA R+ ++ TFE++ GK F Sbjct: 219 MRMRGLAHDTMIAMKILNENEPSVALKNLATRYGKFFGFDGESHTFEDLFGKA----CFA 274 Query: 488 QIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKI 547 + L+ A YAA+D +T +L+ L K + L ++ +E PLV + +E+ G + Sbjct: 275 DVPLDMALIYAAKDTHLTWELYKWQMEHLTKREDLLKLYRELENPLVDICVEMEQTGFAV 334 Query: 548 DPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAP 607 D + EEL LAE+EK GE N +S QL +L+++ G+ G Sbjct: 335 DTAFAQEYGEELKGELAEVEKTLVAHFGE-INFNSPAQLAEVLYDRLGLP-----QGKER 388 Query: 608 STSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATG 667 ST + L+ L +P + +L+YR L KL TY + LP + GR+H S++Q T TG Sbjct: 389 STDVKTLKGLKGRHPGIEPLLKYRELTKLLGTYVEALPHQLKA-DGRIHGSFNQVATVTG 447 Query: 668 RLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAF 727 R +S +PNLQN+P R R+ +AP+ ++++ D+SQIE RI+AH+S D + Sbjct: 448 RFASREPNLQNLPPRA------RRLIVAPKGWLLLGIDFSQIEPRILAHMSGDPHFREPY 501 Query: 728 AEGKDIHRATAAEVFGLPLETVT--SEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQ 785 +G+D++ AA VF +PL S+ R+ K ++YG S F L+ QL I +EA Sbjct: 502 LKGEDLYSTLAARVFKVPLSECGDGSKYRKMMKIGLLAVMYGTSMFTLSEQLGISVEEAH 561 Query: 786 KYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLP------------------- 826 ++++ +++ YP V +++ T K+ YV TL GR+ P Sbjct: 562 RFIEGFYDEYPDVYAFIKDTWEFVKKNEYVATLYGRKRRFPGHREQAIVYDQLAAKICKA 621 Query: 827 ------------------DIKSSNGARRAAAER---AAINAPMQGTAADIIKRAMIAVDA 865 D+K GA + ER A+NA +QGTAADI+KRA++ + Sbjct: 622 LGTERVPLDFWSNKGIPKDLKRKFGAVKGEVERVRRMAVNARIQGTAADIMKRALLNLYE 681 Query: 866 WLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWD 925 + +A ++ VHDE + V A +++ M L+VP+ V+ W Sbjct: 682 YTRARGWKING--TVHDEALLLVRDTITLAEVEELEACMVRAAELEVPVKVDTEIMARWG 739 Query: 926 Q 926 Sbjct: 740 D 740 >UniRef50_C3U0N1 Truncated DNA polymerase I n=1 Tax=uncultured bacterium RepID=C3U0N1_9BACT Length = 557 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 185/541 (34%), Positives = 265/541 (48%), Gaps = 47/541 (8%) Query: 7 NPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 L L+D + +YRAY+A P S G T A +G + L LI + KPTH AV FD Sbjct: 3 KKLFLLDAMALIYRAYYALIRSPRITSKGRNTNAQFGFTSTLIDLINKEKPTHLAVCFDT 62 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 + T R F YK++R P+DL + + + ++ A +P++ + G EADDVIGTLA + Sbjct: 63 EAATERHTDFAEYKANRQAAPEDLISALPDIKKIITAFNIPVVELDGYEADDVIGTLAWQ 122 Query: 125 AEKAGRPVLISTGDKDMAQ-LVTPNITLINT----MTNTILGPEEVVNKYGVPP-ELIID 178 A G V + T DKD Q L+ N+ + IL +++ K+G+ + ++D Sbjct: 123 AADKGYEVFMVTPDKDYGQLLIHNNVFIYKPPYQGGKEDILDAKKICEKWGIERVDQVVD 182 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 L LMGD+ DNIPG+ G+GEKTA LL+ L+ + A + I G + K+ Sbjct: 183 MLGLMGDAVDNIPGIAGIGEKTACKLLKEFDNLENILANADNIKG-------AVGEKIRN 235 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADV------- 291 KE A +S +LA I TDV ++ E +++ EL LF + EFK + Sbjct: 236 GKEAALMSKKLARIITDVPVQFHEEDYRLKEWNQPELKELFNELEFKALGKRLLGDDFSV 295 Query: 292 --------EAGKWLQAKGAKPAAKPQETSVADEAPEVTAT---------VISYDNYVTIL 334 A + G +K E + E E T T + Y I Sbjct: 296 FDKAGNATPANGQMDMFGTAVESKSTEENANSETDETTETVGLTADKNLGNTPHTYTLID 355 Query: 335 DEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPD 394 EE +K +A+L +FDTET LVGLSF + G YIP P Sbjct: 356 TEEKIKQLVAELMAQDEISFDTETTGTYAHDVELVGLSFCYKTGEGYYIPC------PPS 409 Query: 395 QISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAG 454 + L+ KPL +D +GQN+KYD +L YG+ L G FDTML Y++ G Sbjct: 410 ANETQALLQHFKPLFDDASKKWIGQNVKYDLIVLKWYGVLLAGQFFDTMLAHYLIEP-EG 468 Query: 455 RHDMDSLAERWLKHKTITFEEIAG-KGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMW 513 R MD L+ ++L+++ + EE+ G KGKNQLT + LE+ YAAEDAD+TLQL Sbjct: 469 RRGMDYLSAQYLQYEPVHIEELIGKKGKNQLTMKDVELEKIKEYAAEDADITLQLKNTYS 528 Query: 514 P 514 Sbjct: 529 K 529 >UniRef50_C8VXR3 DNA-directed DNA polymerase n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VXR3_DESAS Length = 755 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 218/717 (30%), Positives = 344/717 (47%), Gaps = 76/717 (10%) Query: 260 LTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAKPQETSVADEAPE 319 + + + E+ + + K E D+ + K A + + Q+ A + E Sbjct: 50 FSKKAITENPRNREKAIAVKKACEAGEIRLDISSKKLSCAAVFRLWRELQQQDTARKINE 109 Query: 320 VTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAI-EPG 378 + A + NY + EE L + L++ A DTET LD + +VGLSF + + Sbjct: 110 LIANTPA--NYRLVQTEEQLDQLVTDLQQEDEIAVDTETTGLDVYNDVIVGLSFTLPKAD 167 Query: 379 VAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGI 438 YIPVAH A Q+SR L LKP+L D K+ N KYD +L +G+ LRGI Sbjct: 168 YHVYIPVAHKV--AGQQLSRRAVLTALKPILTDVNIGKILHNSKYDIHMLIRHGLRLRGI 225 Query: 439 AFDTMLESYILNSVAGRHDMDSLAERWLKH-----KTITFEEIAGKGKNQLTFNQIALEE 493 DTM+ +LN + +LA ++ K+ K+ T+EE+ GK +F +I L+ Sbjct: 226 KHDTMIAMAVLNENEPTLALKNLATKYGKYFGFEDKSYTYEELFGK----TSFAEIPLDA 281 Query: 494 AGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLH 553 A YAA+D +T +L+ L + + +++ +E PL+ V +E+ G ID Sbjct: 282 ALVYAAKDTHLTYELYKWQRQHLNQKESLRLIYDELENPLIDVCVDMEQAGFLIDMDFAM 341 Query: 554 NHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEV 613 + EL +A LE E G+ N +S QL +L++K + + G ST + Sbjct: 342 EYKAELKGEIAGLEANLTEHFGD-INFNSPLQLAAVLYDKLKLPVI---KGKERSTDVKT 397 Query: 614 LEELALD--YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSS 671 L++L + + V+L+YR L KL TY + LP +I K G +H S++Q T TGR +S Sbjct: 398 LKKLRDETKHEGIDVLLKYRELTKLLGTYVEALPQLI-KKDGLLHGSFNQVATVTGRFAS 456 Query: 672 TDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGK 731 +PNLQN+P R R+ +APED +I+ D+SQIE R++AH+S D L + +G+ Sbjct: 457 REPNLQNLPPRA------RRLIVAPEDSLILGVDFSQIEPRVLAHMSGDPHLQEPYLKGQ 510 Query: 732 DIHRATAAEVFGLPLETV--TSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMD 789 D++ A+ VF + E S+ R+ K ++YG S + LA QL I +EA ++++ Sbjct: 511 DLYSTLASRVFKVSYEECGDDSKYRKMMKVGLLAVMYGTSMWTLADQLGITVEEANQFIE 570 Query: 790 LYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPD---------------------- 827 +F YP V ++ T AK+ YVETL GR+ P Sbjct: 571 DFFATYPDVYAFICATHEFAKQNEYVETLYGRKRRFPGHREKAIVYDKLATEICEILGTK 630 Query: 828 ----------------IKSSNGARRAAAE---RAAINAPMQGTAADIIKRAMIAVDAWLQ 868 ++ A + E R A+NA +QGTAADI+KRA+I + Sbjct: 631 AVPYDYWQYKKELPVILRRQFRAVKGEVERVRRMAVNARIQGTAADIMKRALINLY---- 686 Query: 869 AEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWD 925 ++I VHDE + V+K+ A ++I M L+VP+ V+ W Sbjct: 687 --NDGRKIIGTVHDEALLIVNKNITLAEVEKIEACMIRSANLNVPIRVDTELSTRWG 741 >UniRef50_C1SHV2 DNA polymerase I n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHV2_9BACT Length = 798 Score = 464 bits (1194), Expect = e-129, Method: Composition-based stats. Identities = 200/518 (38%), Positives = 288/518 (55%), Gaps = 46/518 (8%) Query: 418 GQNLK-----YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTIT 472 G NLK YD + E A+D L S++ + +G K K Sbjct: 316 GHNLKSAQFFYDIKGIYRLIGERYEEAYDVFLMSWLNDPDSGG---------ITKSKAEN 366 Query: 473 FEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMP 532 E+ G + +H + D K G L V+ +E+P Sbjct: 367 IEQFIGN--------------------------IVVHAQEEKDKLKANGLLEVYLGMELP 400 Query: 533 LVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFE 592 + L ++E NG+ D V+ +++L +AE+ +K G + NL+S KQLQ LFE Sbjct: 401 VAYCLGKMENNGIGFDKDVMAKVADKLQDEVAEISEKIKTFVGYDINLNSPKQLQVFLFE 460 Query: 593 KQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILE----YRGLAKLKSTYTDKLPLMI 648 + G++ LKKT G ST EE L + PL +LE YR LAKL STY L + Sbjct: 461 ELGVEGLKKTKTG-FSTDEESLRAMIPMNPLYAHVLEDILVYRELAKLLSTYALPLKDYV 519 Query: 649 NPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQ 708 GR+H+S+ Q TATGRLSS +PN+QNIP++ + G ++R+AFI E Y VS DYSQ Sbjct: 520 LA-DGRIHSSFRQTGTATGRLSSVNPNMQNIPMKGKWGVKLREAFIPREGYSFVSFDYSQ 578 Query: 709 IELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGM 768 IELRI+AHL+ D+ L A+ +DIH TA+ +FG+ E V S RR AKA+NFG++YG+ Sbjct: 579 IELRILAHLTGDEHLKEAYRNNEDIHTKTASGIFGVAPEKVDSGMRRLAKAVNFGILYGL 638 Query: 769 SAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDI 828 S FGL+R + +KEA+K+++ YF YP V ++E+ + KE+GY ETL GR+ ++ +I Sbjct: 639 SPFGLSRDTGVSQKEAKKFIEKYFATYPKVKGFIEKIAKETKEKGYAETLAGRKRFIREI 698 Query: 829 KSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEV 888 +S N ER A N PMQG+AADIIK AM+ A L ++ +++QVHDELVFEV Sbjct: 699 RSKNRTVAMRGERIATNVPMQGSAADIIKLAMVECQAVLDDKEYDALVVLQVHDELVFEV 758 Query: 889 HKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 D+D + ++ +ME LDVPL+V +G+N + Sbjct: 759 LDKDIDEFSDRVRSIMEGVMELDVPLVVNGAAGKNLGE 796 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 120/385 (31%), Positives = 183/385 (47%), Gaps = 32/385 (8%) Query: 10 ILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKTF 69 I++DGS +R YH PPLTNSAG PT ++GV+ + +LI +Y + AVVFDAKGK Sbjct: 3 IVIDGSYIAFRTYHKSPPLTNSAGVPTSVIHGVMQSIITLINKYGRENIAVVFDAKGKNR 62 Query: 70 RDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKAG 129 R E+ YK+ R P+DL Q + ++ +G+ V G E DD++ T+A + Sbjct: 63 RHEIHPEYKATRDATPEDLGLQFGIMDELIPLLGVAYYKVDGYEGDDIMATIAAHTK--- 119 Query: 130 RPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSDN 189 V + T DKD+ Q+V + + ++ G + V+ K+GVPPE + + LAL GD++DN Sbjct: 120 DDVGMLTKDKDIYQIVDDRVKIYDSQKGEFFGRDMVIEKFGVPPEKVRELLALAGDTADN 179 Query: 190 IPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQL 249 IPGV GVG KTA LL G LD +Y E + G + KL NK+ AYLSY L Sbjct: 180 IPGVAGVGVKTAAKLLNEHGSLDGIYENIESVKG-------KLKDKLIDNKDSAYLSYDL 232 Query: 250 ATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAKPQ 309 + ++ + +E+ + +L + E K + + A +P Sbjct: 233 VGL----DILESIPDVEIVKDDK-KLSEKLTELELKTIQSKLFA------DSDSEDVQPD 281 Query: 310 ETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLV 369 +V T + D + + D E + K+ F +D + L+ Sbjct: 282 VKAVEAGDVSDVHTAVFLDGKIYVTDGEKYCEYDGHNLKSAQFFYDIKGIY------RLI 335 Query: 370 GLSFAIEPGVAAYIPVAHDYLDAPD 394 G E AY +L+ PD Sbjct: 336 G-----ERYEEAYDVFLMSWLNDPD 355 >UniRef50_B3RWI3 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3RWI3_TRIAD Length = 1492 Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats. Identities = 165/578 (28%), Positives = 300/578 (51%), Gaps = 44/578 (7%) Query: 368 LVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGI 427 +VG++ + ++ + D + + + +E+ A+K+ NLK I Sbjct: 932 VVGIAICWGGFDSYFVNLG-------DCNTLQDDVANN---IENSSAIKIAYNLKEQYKI 981 Query: 428 LANY-GIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK--GKNQL 484 L + +E++G ++D + ++L+ A ++ +L + + + G N + Sbjct: 982 LTRHLQVEIKGTSYDPKIGIWLLDQDAHEKTFHAIISNYLADEAALLDCVIGTCTDGNGI 1041 Query: 485 TFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNG 544 + + R A ++ + +LH + L K + ++ IEMP + L +E +G Sbjct: 1042 GLHYNSQTSGRRRACIESVLVHKLHSVVEAML-KERELYKLYSEIEMPTIRTLCWLELDG 1100 Query: 545 VKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPG 604 + E L RL +E+ A+ IAG F L+S + +L+ + Sbjct: 1101 IGFCMDECQQQIERLQYRLHYIEEMAYRIAGRSFQLTSPTDIAHVLYTELN--------- 1151 Query: 605 GAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLM----INPKTGRVHTSYH 660 T ++VL++L+ +PLP ++LE+R + + L KT RV+ + Sbjct: 1152 ----TCKDVLQKLSQIHPLPALVLEWRRINSALTKTLYPLKRYSKYCHKSKTYRVYPTC- 1206 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGR--RIRQAFIAPEDYVIVSADYSQIELRIMAHLS 718 Q TATGR+S +DPNLQNIP + + R+R D +++SADYSQ+ELR++AHLS Sbjct: 1207 QMHTATGRISISDPNLQNIPKDFDIAKMVRMRNIIGCTNDTILLSADYSQLELRLIAHLS 1266 Query: 719 RDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLN 778 DK L +G D+ +A A+E +P + V+ EQR+ AK + +G+IYGM+ L Q+ Sbjct: 1267 EDKQLSRVLNDGGDVFKAIASEWLCIPTDHVSDEQRQRAKQMCYGIIYGMTPMALGEQMK 1326 Query: 779 IPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAA 838 +P ++A +M + RY G+ +++E+T + +GYV T+ R+ LP+I+S+N R+ Sbjct: 1327 VPEEQAATFMHTFKSRYNGIAKFIEKTLVSCRREGYVSTIMNRKRLLPNIRSTNARLRSH 1386 Query: 839 AERAAINAPMQGTAADIIKRAMIAVDAWLQA----------EQPRVRMIMQVHDELVFEV 888 AER AIN +QG+AAD++K AMI + + + + + ++Q+HDEL+FE+ Sbjct: 1387 AERQAINTTVQGSAADLVKIAMINIHKRIDEMCANRANRDNAEWKPKFVLQMHDELLFEI 1446 Query: 889 HKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 +++++V+ + Q MEN +L V L V++ +G+ W + Sbjct: 1447 KANELESVSLIVKQEMENALKLRVKLEVKIKTGKYWGE 1484 >UniRef50_C3U0N4 DNA polymerase I n=1 Tax=uncultured bacterium RepID=C3U0N4_9BACT Length = 803 Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats. Identities = 185/425 (43%), Positives = 260/425 (61%), Gaps = 11/425 (2%) Query: 511 KMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKA 570 K+ + + G +V+ IE PL+ VL I G+ +D L S + L LE K Sbjct: 375 KLEERVMSNLGLASVYVKIEQPLMEVLQHINATGITLDTAYLAGLSVTMHTELTALEGKI 434 Query: 571 HEIAGEEFNLSSTKQLQTILFEKQGIKPL--KKTPGGAPSTSEEVLEELALDYPLPKVIL 628 + AG EFN++S KQ+ +LF++ G+KP KKT GG ST E LE++ D+P+ IL Sbjct: 435 YTHAGREFNINSPKQMGEVLFDEMGLKPKNQKKTAGGQRSTKESELEKMREDHPIITEIL 494 Query: 629 EYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRR 688 YR L KL STY D LP +++ GR+ T++ Q ATGR++S +PNLQNIP+R EE + Sbjct: 495 RYRELQKLVSTYIDNLPPLVSA-DGRLRTTFVQTGAATGRMASQNPNLQNIPIRTEESKA 553 Query: 689 IRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLET 748 IRQAF+A Y IVS DYSQIELRI A LSRD+ ++ FA G+D+H A VFG+ E Sbjct: 554 IRQAFVASPGYSIVSIDYSQIELRIAAILSRDEKMVEIFARGEDVHTGVAVRVFGVTPEE 613 Query: 749 VTSEQRRSAKAINFGLIYGMSAFGLARQL--NIPRKEAQKYMDLYFERYPGVLEYMERTR 806 VT E RR AK INFG++YGM L L R+EAQ++ + YF + + EY+E T+ Sbjct: 614 VTREMRRKAKVINFGILYGMGVNALRGNLGEGTSREEAQEFFNAYFNTFTRLAEYLEETK 673 Query: 807 AQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAW 866 A A++ GY ETL GRR + P ++S+ RA AER AINAP+QGTAAD ++ AM V + Sbjct: 674 AFARKNGYTETLFGRRRHFPGMQSTAPFIRAQAERMAINAPVQGTAADAMRVAMNLVYQY 733 Query: 867 LQAEQ--PRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTR----LDVPLLVEVGS 920 +Q E+ V +++QVHDEL+FE+ + ++ ++ +LM+ VP+ +V Sbjct: 734 IQTEKKTDDVHILLQVHDELLFEIKNNVLETEIPKLVELMQGVLEGYDTSGVPIKADVAV 793 Query: 921 GENWD 925 G NW Sbjct: 794 GPNWG 798 Score = 329 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 119/405 (29%), Positives = 188/405 (46%), Gaps = 20/405 (4%) Query: 2 VQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 ++ + L+L+D + L+RAYHA P + +GEPTGA+YGV+ ML +I +KP + A Sbjct: 12 IKSDKKTLVLLDSHAILHRAYHALPDFASPSGEPTGALYGVVAMLLKIIEDFKPDYIAAC 71 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 FD T+R E F YK R D L QI + A G+P+ G EADD++GT+ Sbjct: 72 FDLPEPTYRHEAFAAYKGTRSKTDDALVQQIIRSRDIFAAFGIPIYEHPGFEADDMLGTI 131 Query: 122 AREAEKAGR-PVLISTGDKDMAQLVT-PNITLINTMTN----TILGPEEVVNKYGVPPEL 175 A + V+I++GD D Q V + + + E V ++G P+L Sbjct: 132 AYQTRDDKDLTVIIASGDMDTMQCVEKKRVQVYTLKKGIKDTILYDEEAVKERFGFGPKL 191 Query: 176 IIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEP--EKIAGLSFRGAKTMA 233 + D+ L GD+SDNIPG+ G+GEKTA L+ G +D +Y + ++ L+ + Sbjct: 192 VPDYKGLRGDTSDNIPGIVGIGEKTATDLITQFGSIDDIYKKLKKDEAPFLAAGIKPRII 251 Query: 234 AKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQ-PAAEELLGLFKKYEFKRWTADVE 292 L+ +E A S LATI+TD + Q+ + +L LF + F+ A + Sbjct: 252 GLLKAGEEEAQFSKMLATIRTDAPITFVPHATHWQERADTDVILNLFSELGFRTLGAKI- 310 Query: 293 AGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVF 352 K L A A A P E+ V + A ++ +L+ E A A + Sbjct: 311 --KTLFALAADVPANPAESGVTPADIQKAAVLLW------LLESERTNASYADIIDYGRS 362 Query: 353 AFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQIS 397 F ET + IS L + + Y+ + ++ I+ Sbjct: 363 YF--ETANFHEISTKLEERVMSNLGLASVYVKIEQPLMEVLQHIN 405 >UniRef50_A3DFZ4 DNA-directed DNA polymerase n=3 Tax=Clostridium RepID=A3DFZ4_CLOTH Length = 640 Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats. Identities = 193/633 (30%), Positives = 304/633 (48%), Gaps = 52/633 (8%) Query: 339 LKAWIAKLEKAPVFAFDTETD-----------SLDNISANLVGLSFAIEPGVAAYIPVAH 387 L L+ +FAFD ET +LD A++ G+SF++ G A Y+P+ H Sbjct: 9 LSEIKEYLKNTVLFAFDFETSPRDKWRNDKSAALDAHKADITGISFSVSEGTAIYVPLKH 68 Query: 388 D-YLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLES 446 +A +Q + L+L L E + +KV NL ++ L GI L+ +DT+ S Sbjct: 69 RSGRNAENQAAIWDYLKL---LFESKDVIKVAHNLAFESMFLYARGIVLQKPCYDTIAAS 125 Query: 447 YI-LNS-----VAGRHDMDSLAERWLKHKTITFEEIA-GKGKNQLTFNQIALEEAGRYAA 499 + L S + +LA K + F + G+ ++L E+ RYA Sbjct: 126 QLTLKSKWEFRSLADSGLKTLAPALCKAEMTEFSTVTEGRFFDELNPQD---EKTVRYAC 182 Query: 500 EDADVTLQLHLKMWPDLQKH-KGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEE 558 D+D TL+L+ + + E +E P + ++ NG+ +D + E Sbjct: 183 ADSDYTLRLYHVFNQWFDRFLPKHRTIVEEVESPTSVYVGIMKYNGILVDKSAMLKKQAE 242 Query: 559 LTLRLAELEKKAHEIAG--EEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVL-- 614 ++ + K+ I G E +ST + LF G+ +K T + +E + Sbjct: 243 AAEKIVSIRKEIAGIIGNVEIGANASTSAFKKYLFVDLGLPVMKTTAKHQEAADDETMIL 302 Query: 615 --EELALDYP----LPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGR 668 E A + P L +++ EYR KLKSTY D I+ TGR+H T TGR Sbjct: 303 LKEWCATNRPELVRLFELVQEYRKWGKLKSTYIDGYLRFIDEDTGRIHPDLMPLGTETGR 362 Query: 669 LSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFA 728 +S +PN+QN P ++ + +R+ IAP V++S D+SQIELR+ A RDK +L + Sbjct: 363 FASRNPNMQNCPQKDNDPIGVRKFIIAPAGKVLLSLDFSQIELRVGAFYCRDKRMLETYR 422 Query: 729 EGKDIHRATAAEVFGLPLETV-------TSEQRRSAKAINFGLIYGMSAFGLARQL---- 777 G DIH T + ++ +P E E+R AK NFG+ YG+ GL R L Sbjct: 423 TGGDIHAQTTSVIYRIPFEEAADKNAPHYKERRTIAKNCNFGVFYGLFPTGLQRTLKFKA 482 Query: 778 --NIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGAR 835 N E + + YPG+ ++ + + +A Y ET GRR YL I+SS+ + Sbjct: 483 GINPTLAECETIIQNLKSGYPGLAKWQDEVKKRAAVSCYSETWLGRRRYLLGIRSSDWGK 542 Query: 836 RAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDA 895 ++ AER A+N P+QGTAADI+K A + + L E+ ++ ++Q+HDELVFE+ +D VD Sbjct: 543 KSFAERCALNTPIQGTAADILKLACGRIISGL-PERLWLKPMLQIHDELVFELPEDKVDE 601 Query: 896 VAKQIHQLMENC--TRLDVPLLVEVGSGENWDQ 926 I + ME DVP++ E G N+ + Sbjct: 602 AVVFIKECMETQPFPAFDVPIVAEASVGRNFGE 634 >UniRef50_D1B5M0 DNA polymerase I n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B5M0_THEAS Length = 836 Score = 440 bits (1133), Expect = e-122, Method: Composition-based stats. Identities = 164/424 (38%), Positives = 244/424 (57%), Gaps = 13/424 (3%) Query: 511 KMWPDLQKH---KGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELE 567 +W ++ +G + ++ PL VL +ER G+ +D + L E L L LE Sbjct: 417 TLWDQIRSDPLWEGVRELVTRVDHPLSAVLVDMEREGIGLDVEGLRGLRERLERALGALE 476 Query: 568 KKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYP----L 623 + AG + NL S KQ+ +LFE+ G+ P+K+T G ST VLEEL+ + Sbjct: 477 EGIAREAGAQVNLQSPKQVAWLLFERLGLPPVKRTKTGL-STDVGVLEELSRLPEPLGRV 535 Query: 624 PKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRN 683 P +ILE+R ++KL + + + P + +G + +++ Q T TGRLSS DPN+QN+P Sbjct: 536 PSMILEHREISKLITAFVN--PFLEQGSSGVIRSTFDQTGTGTGRLSSRDPNVQNLPQFG 593 Query: 684 EEGRRIRQAFIA-PEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVF 742 R+ + E V VSADYSQIELR++AHLS ++ L+ AF EG D+H TA+ ++ Sbjct: 594 HWAVEFRRCLVPVEEGNVFVSADYSQIELRVLAHLSGEERLIRAFEEGADVHARTASWIY 653 Query: 743 GLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYM 802 G+ + V+ EQRR AK +NFGL+YGM A GLA+++ + R EA + M+ YF PGV E+ Sbjct: 654 GVDPQAVSPEQRRFAKVVNFGLLYGMGAHGLAQRMGVSRSEAAEVMERYFSALPGVREFT 713 Query: 803 ERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIA 862 R QAK +GY TL GR L ++ + G A +R AIN P+QG+AADI ++AM+ Sbjct: 714 RRMVEQAKARGYAATLMGRVRPLSEVSTVEGRGAGAIDRVAINTPIQGSAADIARKAMVE 773 Query: 863 VDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGE 922 + L RM++QVHD +V V + VA+ + ++ME L VPL+VEV +G Sbjct: 774 LHRALA--GGDCRMVLQVHDSIVCSVPEGMASRVAELMREVMEGAASLSVPLVVEVKTGG 831 Query: 923 NWDQ 926 Sbjct: 832 TLGD 835 Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 97/348 (27%), Positives = 169/348 (48%), Gaps = 26/348 (7%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 + +LVDG +RA++A P L+ G P A+ G LNML ++ +PT A+ FD G Sbjct: 3 DRFLLVDGHGLAFRAFYALPALSAPDGTPVNAVLGFLNMLYKVLEDQRPTGWAIFFDPPG 62 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 R E+ E YK+ R P P + + Q+ + +++A+G P+ G EADDVI A Sbjct: 63 PVIRREVLESYKAGRRPTPQEFKVQLPIIIDLLEALGHPVHVREGQEADDVIAATAVNLS 122 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLAL 182 +G V+I + DKD+ Q+++P++ + + + E + +Y PP L+ D+LAL Sbjct: 123 GSG-EVVILSADKDLLQVISPSVKVCRPVKGVSEFRVYDQEAFLEEYRFPPALMADYLAL 181 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 GDS DNIPGVPG+G+K A+ L+ LG L+++Y ++++ +LE+ +E+ Sbjct: 182 TGDSVDNIPGVPGIGDKGARELVSSLGPLESIYEALDRLS-------PAKRKRLEEGREL 234 Query: 243 AYLSYQLATIKTDVELE---LTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 A+LS QL + + L L ++ L + + ++ + Sbjct: 235 AFLSRQLV-----LPVPTESLDVRDLVPREAQRGRALRILEGLAMRQLIQRLGL------ 283 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLE 347 GA A + +S +++ + E L+ ++L Sbjct: 284 DGADRGAGVEVSSTGGAVESSLEDLLASGTLALVGRWEELQRGSSELA 331 >UniRef50_Q7TQC0 DNA polymerase Q n=13 Tax=Deuterostomia RepID=Q7TQC0_MOUSE Length = 2587 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 179/688 (26%), Positives = 295/688 (42%), Gaps = 129/688 (18%) Query: 366 ANLVGLSFAIEPGVAAYIPVAHDYLD-------APDQISRE-------RALELLKPLLED 411 A +VGL+ A Y+ + + AP + L+ D Sbjct: 1896 AVVVGLAVCWGAKDAYYLSLQKEQKQSEISPSLAPPPLDATLTVKERMECLQSCLQKKSD 1955 Query: 412 EKALKVGQNLKYDRGILA-NYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKT 470 + V + +L + GI L D + ++L+ + + S+ +L H+ Sbjct: 1956 RERSVVTYDFIQTYKVLLLSCGISLEPSYEDPKVACWLLDPDSKEPTLHSIVTSFLPHEL 2015 Query: 471 ITFEEI-AGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENI 529 E + G G L N + E +GRY A V + + L + + ++F + Sbjct: 2016 ALLEGMETGPGIQSLGLN-VNTEHSGRYRASVESVLIFNSMNQLNSLLQKENLHDIFCKV 2074 Query: 530 EMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTI 589 EMP L+ +E NG+ + + +L +E +A+++AG F+ +S + + Sbjct: 2075 EMPSQYCLALLELNGIGFSTAECESQKHVMQAKLDAIETQAYQLAGHSFSFTSADDIAQV 2134 Query: 590 LFEKQGIKPLKKTPGG-----------------------APSTSEEVLEELALDYPLPKV 626 LF + + P + STS+++L +L +PLP + Sbjct: 2135 LFLELKLPPNGEMKTQGSKKTLGSTRRGNESGRRMRLGRQFSTSKDILNKLKGLHPLPGL 2194 Query: 627 ILEYRGLAKLKSTYTDKLP--LMINP--KTGRVHTSYHQAVTATGRLSSTDPNLQNIPVR 682 ILE+R ++ + L +NP + R++ Q+ TATGR++ T+PN+QN+P Sbjct: 2195 ILEWRRISNAITKVVFPLQREKHLNPLLRMERIYP-VSQSHTATGRITFTEPNIQNVPRD 2253 Query: 683 NE----------------EGR-----------------------------------RIRQ 691 E +GR +R Sbjct: 2254 FEIKMPTLVRESPPSQAPKGRFPMAIGQDKKVYGLHPGHRTQMEEKASDRGVPFSVSMRH 2313 Query: 692 AFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTS 751 AF+ +I++ADYSQ+ELRI+AHLSRD L+ G D+ R+ AAE + + V Sbjct: 2314 AFVPFPGGLILAADYSQLELRILAHLSRDCRLIQVLNTGADVFRSIAAEWKMIEPDAVGD 2373 Query: 752 EQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKE 811 + R+ AK I +G+IYGM A L Q+ I +A Y+D + RY G+ +M T ++ Sbjct: 2374 DLRQHAKQICYGIIYGMGAKSLGEQMGIKENDAASYIDSFKSRYKGINHFMRDTVKNCRK 2433 Query: 812 QGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQ 871 G+VET+ GRR YLP IK N +A AER AIN +QG+AADI+K A + + L+ + Sbjct: 2434 NGFVETILGRRRYLPGIKDDNPYHKAHAERQAINTTVQGSAADIVKIATVNIQKQLETFR 2493 Query: 872 PRVR---------------------------------MIMQVHDELVFEVHKDDVDAVAK 898 + I+Q+HDEL++EV ++DV VA+ Sbjct: 2494 STFKSHGHRESMLQNDRTGLLPKRKLKGMFCPMRGGFFILQLHDELLYEVAEEDVVQVAQ 2553 Query: 899 QIHQLMENCTRLDVPLLVEVGSGENWDQ 926 + ME +L V L V+V G +W + Sbjct: 2554 IVKNEMECAIKLSVKLKVKVKIGASWGE 2581 >UniRef50_Q7TQ07 DNA polymerase nu n=13 Tax=Tetrapoda RepID=DPOLN_MOUSE Length = 864 Score = 437 bits (1125), Expect = e-121, Method: Composition-based stats. Identities = 172/591 (29%), Positives = 281/591 (47%), Gaps = 50/591 (8%) Query: 375 IEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK-YDRGILANYGI 433 I YI H P Q + + + K V N K + R +L YG Sbjct: 274 ISEDHCVYIHTEHSPFWDPKQEAHSLFVRNILFWTLRCKCPVVCFNAKDFVRTVLQLYGE 333 Query: 434 E------LRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFN 487 + + D + +++++ + L + L+ K TF Sbjct: 334 DGSWKHVADFVGLDPRVAAWLIDPSDTAPSFEDLVAKHLEKSITV--------KPSSTFR 385 Query: 488 QIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKI 547 + + + + + L + + L+ + G +F +E+PL+P+L+ +E + + + Sbjct: 386 EASRNTLSQNVFMNLKILYDLTMDLCSKLKAY-GLWQLFCTLELPLIPILAVMENHKIPV 444 Query: 548 DPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTP---- 603 D + + S L RL ELE++AH +AGE+F + S QL+ ILF K + L + Sbjct: 445 DKEEMERTSALLGARLKELEQEAHFVAGEQFLIMSNNQLREILFGKLKLHLLSQRKHLPR 504 Query: 604 GG---APSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 G STSE +L L +PLPK+ILEYR + K+KST+ D L + K G + ++++ Sbjct: 505 TGLQNQLSTSEAMLNSLQDLHPLPKLILEYRQVHKIKSTFIDGLLAYM--KKGSISSTWN 562 Query: 661 QAVTATGRLSSTDPNLQ-------------NIPVRNEEGRRI--RQAFIAPEDYVIVSAD 705 Q T TGRLS+ PN+Q N + EE I R F++ E + ++AD Sbjct: 563 QTGTVTGRLSAKHPNIQGISKHPIKISKPWNFKGKEEETVTISPRTLFVSSEGHTFLAAD 622 Query: 706 YSQIELRIMAHLSRDKGLLTAFAEGK--DIHRATAAEVFGLPLETVTSEQRRSAKAINFG 763 +SQIELRI+AHLS D LL F E + D+ ++ +P+E VT R K + + Sbjct: 623 FSQIELRILAHLSGDPELLKLFQESERDDVFSTLTSQWKDIPIERVTHMDREQTKKVVYS 682 Query: 764 LIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRL 823 ++YG LA L + EA +++ + ++Y + ++ + Q GYV ++ GRR Sbjct: 683 VVYGAGKERLAACLGVTVLEATHFLERFLQKYKKIKDFAQTVIGQCHSAGYVTSILGRRR 742 Query: 824 YLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAE-QPRVRMIMQVHD 882 LP I + + RA AER A+N +QG+AAD+ K AMI + + R++ Q+HD Sbjct: 743 PLPRICAQDQQLRAQAERQAVNFVVQGSAADLCKLAMIRISTAVATSPTLTARLVAQIHD 802 Query: 883 ELVFEVHKDDVDAVAKQIHQLMEN-------CTRLDVPLLVEVGSGENWDQ 926 EL+FEV V A + ++ME+ +L VPL V + G +W Sbjct: 803 ELLFEVEDTQVPEFAALVRRIMESLQQVQTLELQLQVPLKVNLSVGRSWGH 853 >UniRef50_B0TCV6 DNA polymerase i n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TCV6_HELMI Length = 645 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 194/648 (29%), Positives = 313/648 (48%), Gaps = 64/648 (9%) Query: 329 NYVTILDEETLKAWIAKLEKAPVFAFDTETD-----------SLDNISANLVGLSFAIEP 377 Y + D L L+KA + AFD ET +LD A++ G+SF++ Sbjct: 2 EYKCVTD---LTELRDYLDKAGLIAFDFETAPREKYRRDEKAALDAHKADIAGVSFSVSE 58 Query: 378 GVAAYIPVAHDY---LDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIE 434 G A Y+P+ H +PD+I + L + + + K +K+ NL ++ L G+ Sbjct: 59 GTAVYVPLKHKTGKNAGSPDKIMQ----WLSENVFANRKVVKIAHNLSFEAMFLYALGVV 114 Query: 435 LRGIAFDTMLESYILNSVAG--------RHDMDSLAERWLKHKTITFEEI-AGKGKNQLT 485 L+ +DT+ + L ++ + +L + +FE + AG+ ++L Sbjct: 115 LQPPCYDTIAAA--LMTLKSNTAFRTLADSGLKTLTQELFGVDLPSFETVTAGRYFDELD 172 Query: 486 FNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKH-KGPLNVFENIEMPLVPVLSRIERNG 544 EE RYA D+D TL+L+ ++ + E +E P ++ NG Sbjct: 173 PQD---EETVRYACADSDYTLRLYHLFNNWFNRYLPKHRFIVEKLESPAAVYCGLMKYNG 229 Query: 545 VKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLS---STKQLQTILFEKQGIKPLKK 601 + D +++ E +LAEL + G+ N+ ST + L++ + K Sbjct: 230 LLADEELMLKKQAEAEGKLAELRGNIAFLIGD-VNIGANASTSAFKKYLYDDLKLPVFKT 288 Query: 602 TPGGAPSTSEEVL----EELALDYP----LPKVILEYRGLAKLKSTYTDKLPLMINPKTG 653 T + +E + E + P L +++ EYR K+KSTY D IN TG Sbjct: 289 TAKYQEAMDDEAMILLSEWCRENRPELAELFELVQEYRRWGKIKSTYIDGYLEYINSVTG 348 Query: 654 RVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRI 713 R+H T TGR ++ +PNLQN P ++ + +R FIAP+ ++S D+SQIELR+ Sbjct: 349 RIHPDMFPLGTETGRFAARNPNLQNCPRKDNDPVGVRNFFIAPKGKALLSLDFSQIELRV 408 Query: 714 MAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETV-------TSEQRRSAKAINFGLIY 766 A RD+ +L + G DIH T + ++ +P E E+R AK NFG+ Y Sbjct: 409 GAFYCRDERMLETYRTGGDIHAQTTSVIYRIPFEEAADKSAQHYKERRAIAKNCNFGVFY 468 Query: 767 GMSAFGLARQLN------IPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDG 820 G+ GL R L P E ++ + YP ++++ E+T+ +A + Y ET G Sbjct: 469 GLFPKGLHRNLKFKAGLDTPLSECERIIANLKAGYPRLVQWQEKTKKRAASRRYTETWLG 528 Query: 821 RRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQV 880 RR YLPDI SS+ +++ AER A+N P+QGTAADI+K A+ + L ++ R+R ++Q+ Sbjct: 529 RRRYLPDIASSDWGKKSFAERCALNTPIQGTAADILKLALGRIIEGL-PQRMRLRPVLQI 587 Query: 881 HDELVFEVHKDDVDAVAKQIHQLMEN--CTRLDVPLLVEVGSGENWDQ 926 HDELVFEV +D V A I ME DVP++ E G + + Sbjct: 588 HDELVFEVPEDKVHEAAVFIKSCMEERPFEEFDVPIVAEAAFGVRFGE 635 >UniRef50_UPI0000DAED41 hypothetical protein Wendoof_01000149 n=1 Tax=Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24 RepID=UPI0000DAED41 Length = 529 Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 162/593 (27%), Positives = 257/593 (43%), Gaps = 82/593 (13%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + + ++DG +L+RAY+ P L + G P G +YG LNM+ I + + D Sbjct: 1 MKEKTFTIIDGYGFLFRAYYVLPHLITTTGMPIGGVYGFLNMVLKYIA--HSDYLTIALD 58 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 A K FR L+ YK++R P+DL Q L V+A L + G EADD+I TLA Sbjct: 59 AGKKNFRHNLYPEYKANRVTPPEDLTPQFTILREAVEAFNLSYEEIEGYEADDIIATLAA 118 Query: 124 E-AEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLAL 182 + A V++ + DKD+ QL+ NI + + + N + ++V+ K+GV ++D +L Sbjct: 119 KYANHQDFKVVVVSSDKDLFQLLNHNILIFDPIKNIYIDEKQVIEKFGVNSHKLLDLFSL 178 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 GD+SDNIPGVPG+G KTA LL L I + + L ++KE Sbjct: 179 TGDASDNIPGVPGIGPKTAAKLLDEFDSL------NNIIENIDNIEQTRIRNILAEHKEK 232 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A +S +L ++ V+L+ + EV+ P E+LL KKYEF VE Sbjct: 233 ALISRELLSLCEKVDLQHDIAKCEVRPPNMEKLLSFLKKYEFNSLIGKVE---------- 282 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 +Y EE ++ +LEK ++ Sbjct: 283 -----------------------KLFSYSGSSTEEKIEYSSEELEKFLEHCRYEGKIAIH 319 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 N V LS + YI +Q S + AL ++ L LK+ N+K Sbjct: 320 YHLENNV-LSLSYSESNIFYI----------EQDSIQDALIIINLTLLSNGVLKIIHNIK 368 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 R I L + D M+ SY L++ H + ++ L F Sbjct: 369 EIRKIFPAIEKMLDSV-DDLMIMSYSLDTGKHDHSIPNIVAHNLSENAEIFS-------- 419 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 A + +H K+ L + K L ++E + PL+ V+ +E+ Sbjct: 420 -------------------AKTLIAIHEKLKQRLFQEK-LLTIYERFDKPLMKVIFDMEK 459 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG 595 NG+ ++ + L S++ +A LE + + +AGE FN++S KQL +LF K G Sbjct: 460 NGILLNIQKLQELSDKFQQVIAVLEDEIYNLAGERFNIASPKQLSDVLFNKMG 512 >UniRef50_Q4UGW4 DNA polymerase i, putative n=2 Tax=Theileria RepID=Q4UGW4_THEAN Length = 1786 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 191/768 (24%), Positives = 332/768 (43%), Gaps = 76/768 (9%) Query: 195 GVGE--KTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQLATI 252 G+GE KTA ++ + +Y S KL+ + E S + TI Sbjct: 1057 GLGELVKTAGKGIKK----EAIYENIRSTIPQSAVVNTKQTEKLDASGE----SETVETI 1108 Query: 253 KTDVELELTCEQLEVQQPAAEELLGLFKKY---------EFKRWTADVEAGKWLQAKGAK 303 K + + ++ + + L ++ EFK + K L ++ Sbjct: 1109 KVE-DEGSPKSEVHSFGVSTSKSLLKLERINVVPNNDIDEFK-LKYLSKLPKSLYKGESQ 1166 Query: 304 PAAKPQETSVADEAP-------EVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDT 356 P ++P++ + D+ P V + D + + E L++ + D Sbjct: 1167 PPSQPEKVASNDQPPIPVDVYYSVNYDPLLIDGIIYVDSYEKLESLKPLFKDPKAVGVDI 1226 Query: 357 ETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRER------ALELLKPLLE 410 ET LD+ + + + ++ + I + + P+ + E LK L + Sbjct: 1227 ETTGLDHNTNQIRLVQLSVPNQPSVIIDLFKLNTNNPESDNVVPGRNELIKCEWLKNLFK 1286 Query: 411 DEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAG-RHDMDSLAERWLKHK 469 + +KV N K+D L YG E G FDTM+ S +L + + ++ER+L Sbjct: 1287 SKDTVKVFHNGKFDINFLRVYGFEFEGPIFDTMVASKLLVASRYISCKLTHVSERYLNIV 1346 Query: 470 TITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENI 529 ++ + QL EE Y+A D+ V L L++ + L+ + L ++ Sbjct: 1347 LDKTQQYSDWSTLQL------FEEQLLYSARDSFVLLPLYVILEHLLKINN--LADIASV 1398 Query: 530 EMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAH-EIAGEEFNLSSTKQLQT 588 E + S +E NG+K+D L +EL E+ + ++ E NL+S KQ+ Sbjct: 1399 ENKCILATSDMELNGIKVDEDKLRILQDELKQEHQEISNDLYSQLNHSEINLNSQKQVLE 1458 Query: 589 ILFEKQGIKPLKKTPGGAPS-TSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLM 647 L E +K + ++ S TSE L + P+ + EYR K + +T KLP Sbjct: 1459 KLQE---LKIMDRSKKKIISDTSESTLIR-NMSNPIISSLREYRKANKALTAFTQKLPNH 1514 Query: 648 INPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYS 707 INP T R++ +Y+Q +GR S PNLQ +P ++ R+ F+AP+ V AD+S Sbjct: 1515 INPITKRIYPNYNQLGAESGRFSCDGPNLQQVPRD----KKFRECFVAPKGSKFVIADFS 1570 Query: 708 QIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYG 767 QIELRI A ++ D ++ A+ + D+H TA+ + + V E+R+ AKA+NFGLI+G Sbjct: 1571 QIELRIAAEIANDPKMIQAYQQNVDLHSLTASILKNKSINEVNKEERQLAKAVNFGLIFG 1630 Query: 768 MSAFGL------ARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGR 821 MS GL L + + EA++ +F + G+L + + V TL R Sbjct: 1631 MSINGLRMYAETGYNLKLTQTEAKEIYTSFFNNFKGILNWHNSVKNS--RPTMVRTLGNR 1688 Query: 822 RLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVH 881 + + ++N P+QGT+ADI K M + ++ ++I+ VH Sbjct: 1689 LSVF----------ESFSFTRSLNYPVQGTSADITKETMARLVDSVKP--LNAKIIICVH 1736 Query: 882 DELVFEVHKDDVDAVAKQIHQLMENCTR---LDVPLLVEVGSGENWDQ 926 DE++ EV +D+ + K + M VP+ G++W Sbjct: 1737 DEIILEVPEDNAEKALKMLIDTMVKSGEKYLKKVPVEAMGSIGDSWAD 1784 >UniRef50_C3YL74 Putative uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae RepID=C3YL74_BRAFL Length = 2215 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 187/669 (27%), Positives = 306/669 (45%), Gaps = 108/669 (16%) Query: 357 ETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKAL- 415 ET + + ++ A P+ D++ E L +K +LE Sbjct: 1550 ETFVAEWKTKTNYAIAVAYTTDEMIPPPLD-------DRLPVEERLHNIKSVLEKGDVCS 1602 Query: 416 -KVGQNLKYDRGILA-NYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITF 473 +V +LK LA GI + G D + ++L+ A +R+ ++ Sbjct: 1603 SQVLFDLKPQYKALALGCGITMNGDFEDPKVADWLLDPGAKVKSFHGTVQRFTPQESYLL 1662 Query: 474 EEIAGK-GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMP 532 + + G G L AA + +T + ++ L + +G F ++EMP Sbjct: 1663 QGLGGCFGVGSLAMTVQNSGSGRMRAALECVLTFHMMEEL-DKLLEAQGLSTAFRDVEMP 1721 Query: 533 LVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFE 592 + L+R+E NG P + + +L LE++A+++AG F L+S + +LF Sbjct: 1722 SLVTLARMELNGAGFSPVECETQCQIMQAKLRMLEEQAYQLAGHTFALTSPDDIAQVLFL 1781 Query: 593 KQGIK------------PLKKTPGGAP----------STSEEVLEELALDYPLPKVILEY 630 + + P K P STS++VLE+L + LP VILE+ Sbjct: 1782 ELKLPANGDPSSTTNPQPRKTLGTARPARGRKPLKHLSTSKDVLEKLKKFHALPGVILEW 1841 Query: 631 RGLAKLKSTYTDKLPL--MINPK--TGRVHTSYHQAVTATGRLSSTDPNLQNIP------ 680 R ++ + L + NP+ R++ + TATGR++ DPNLQNIP Sbjct: 1842 RRISNSLTKVVFPLQKEKVYNPRLNMDRIYGNCD-LHTATGRVTFHDPNLQNIPKDFEIE 1900 Query: 681 -------------------------VRNEEGRRI-------------RQAFIAPEDYVIV 702 VR +GRR+ R AFI + V++ Sbjct: 1901 MPTIIGDSPPPGCGETVSKRKGRKVVRRTDGRRVESDGAGQAFSVSLRHAFIPFQGGVLL 1960 Query: 703 SADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINF 762 +ADYSQ+ELRI+AHLS+D L G+D+ +A A++ G+ +E V+ + R+ AK + + Sbjct: 1961 AADYSQLELRIIAHLSQDSKLTQVLNSGQDVFKAIASQWKGVAMEDVSDKLRQQAKQLCY 2020 Query: 763 GLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRR 822 G+IYG+ A L QL + +E +++ + +Y G+ Y+ T Q K+ G+V+T+ GRR Sbjct: 2021 GMIYGIGAKALGEQLGVDEEEGACFIETFKSKYTGMRRYLHTTVDQCKKDGFVQTMAGRR 2080 Query: 823 LYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVR------- 875 YLP I N R AER A+N +QG+AAD++K+AM+++D LQ P R Sbjct: 2081 RYLPGITEGNHHVRCHAERQAVNTTVQGSAADLVKKAMVSIDQKLQKLFPATRRSHRQDT 2140 Query: 876 ------------------MIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVE 917 +I+Q+HDEL++EV ++DV VA+ + MEN +L V L V+ Sbjct: 2141 QKRSRRSQQPSSPPRGAYLILQLHDELIYEVRREDVQQVAQIVKHEMENAVKLSVVLPVK 2200 Query: 918 VGSGENWDQ 926 V G W + Sbjct: 2201 VKVGPTWGR 2209 >UniRef50_Q7Z5Q5 DNA polymerase nu n=15 Tax=Amniota RepID=DPOLN_HUMAN Length = 900 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 168/591 (28%), Positives = 289/591 (48%), Gaps = 50/591 (8%) Query: 375 IEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK-YDRGILANYGI 433 + YI + H + +Q + ++ + K + N K + R +L +G Sbjct: 275 VSDDPCIYIQIEHSAIWDQEQEAHQQFARNVLFQTMKCKCPVICFNAKDFVRIVLQFFGN 334 Query: 434 E------LRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFN 487 + I D + +++++ + L E++ + K T+ Sbjct: 335 DGSWKHVADFIGLDPRIAAWLIDPSDATPSFEDLVEKYCEKSITV--------KVNSTYG 386 Query: 488 QIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKI 547 + + E+ +L + + L K G +F +E+PL+P+L+ +E + +++ Sbjct: 387 NSSRNIVNQNVRENLKTLYRLTMDLCSKL-KDYGLWQLFRTLELPLIPILAVMESHAIQV 445 Query: 548 DPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPG--- 604 + + + S L RL ELE++AH +AGE F ++S QL+ ILF K + L + Sbjct: 446 NKEEMEKTSALLGARLKELEQEAHFVAGERFLITSNNQLREILFGKLKLHLLSQRNSLPR 505 Query: 605 ----GAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 PSTSE VL L +PLPK+ILEYR + K+KST+ D L + K G + ++++ Sbjct: 506 TGLQKYPSTSEAVLNALRDLHPLPKIILEYRQVHKIKSTFVDGL--LACMKKGSISSTWN 563 Query: 661 QAVTATGRLSSTDPNLQNIPV-----------RNEEGRRI----RQAFIAPEDYVIVSAD 705 Q T TGRLS+ PN+Q I + +E + + R F++ + + ++AD Sbjct: 564 QTGTVTGRLSAKHPNIQGISKHPIQITTPKNFKGKEDKILTISPRAMFVSSKGHTFLAAD 623 Query: 706 YSQIELRIMAHLSRDKGLLTAFAEGK--DIHRATAAEVFGLPLETVTSEQRRSAKAINFG 763 +SQIELRI+ HLS D LL F E + D+ ++ +P+E VT R K + + Sbjct: 624 FSQIELRILTHLSGDPELLKLFQESERDDVFSTLTSQWKDVPVEQVTHADREQTKKVVYA 683 Query: 764 LIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRL 823 ++YG LA L +P +EA ++++ + ++Y + ++ AQ + G V ++ GRR Sbjct: 684 VVYGAGKERLAACLGVPIQEAAQFLESFLQKYKKIKDFARAAIAQCHQTGCVVSIMGRRR 743 Query: 824 YLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQ-PRVRMIMQVHD 882 LP I + + RA AER A+N +QG+AAD+ K AMI V + A R++ Q+HD Sbjct: 744 PLPRIHAHDQQLRAQAERQAVNFVVQGSAADLCKLAMIHVFTAVAASHTLTARLVAQIHD 803 Query: 883 ELVFEVHKDDVDAVAKQIHQLMEN-------CTRLDVPLLVEVGSGENWDQ 926 EL+FEV + A + + ME+ +L VPL V + +G +W Sbjct: 804 ELLFEVEDPQIPECAALVRRTMESLEQVQALELQLQVPLKVSLSAGRSWGH 854 >UniRef50_B4AHF3 DNA polymerase I n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AHF3_BACPU Length = 744 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 208/681 (30%), Positives = 331/681 (48%), Gaps = 41/681 (6%) Query: 266 EVQQPAAEELLGLFKKYEFKRWTADV-----EAGKWLQAKGAKPAAKPQET-SVADEAPE 319 ++ ++L + E R D +AGK + A+ + + E Sbjct: 45 KLSDSDRQKLDEVKAAMEDGRLARDPSDCVNKAGKPKKFSKAEALRLWKTVQAQNREDKL 104 Query: 320 VTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVG-LSFAIEPG 378 + +NY I DE+ L ++A LE FD ET +D + +VG + AI+ Sbjct: 105 RKMVEETPENYWLITDEKRLAEFVALLENEEEIVFDVETTGVDVWNDYIVGHVITAIKAD 164 Query: 379 VAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGI 438 V AYIP H + Q+SR+ E L+P ED K+ N K+D +L GI+LRG+ Sbjct: 165 VHAYIPTRHKTILP--QLSRDLVNETLRPFYEDPTVGKLAHNAKFDIHMLDREGIKLRGL 222 Query: 439 AFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQI-ALEEAGRY 497 +DT +LN + +L ++L+ ++ T+ ++ GK + F+++ LE A Y Sbjct: 223 TWDTQEAMRLLNENEPSFALKNLVTKYLRIESSTYGDLFGK----IGFDEVDDLEIALAY 278 Query: 498 AAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSE 557 AA+D DVTL+L L K L +E +E+PL+ V+ ++E G ID + Sbjct: 279 AAKDGDVTLKLRNFQREHLAKMPEVLRYYETVEVPLISVVQQMETTGFDIDLDYAEEYGR 338 Query: 558 ELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTS-EEVLEE 616 EL L L + E G+ N++S QL+ L + T ST ++VL+ Sbjct: 339 ELKSGLDRLYDELIEELGD-VNINSPAQLKPALE--------RVTGESLASTDAKKVLKP 389 Query: 617 LALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSS--TDP 674 LA YP+ K +LEY+ KL STY + LP +I+ KTG+++T+++ TGR SS T Sbjct: 390 LAKKYPVVKKLLEYKDSFKLYSTYINALPELIDQKTGKLYTNFNPNGAKTGRFSSGGTGV 449 Query: 675 NLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIH 734 NLQN P ++ R+ F+APE Y I+ D+SQ E R +A+ ++D L+ + G D++ Sbjct: 450 NLQNQP------KKARKLFVAPEGYAILGGDWSQQEYRCLAYFTQDPKLVDNYFRGDDLY 503 Query: 735 RATAAEVFGLPLETV--TSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYF 792 + AAEVFG P+E S R+ AK I + YG A L + + + EAQK++D +F Sbjct: 504 ASIAAEVFGKPIEECGDGSVYRKQAKVIMLAVAYGGGANMLKDAIGVEKHEAQKFLDSFF 563 Query: 793 ERYPGVLEYMERTRAQAKEQGYV-ETLDGRRLYLPDIKSSNGA-RRAAAERAAINAPMQG 850 ER+P V E++E + K+ G+V R+ LPD K + +A + NA +QG Sbjct: 564 ERFPVVKEWVESNQKFVKKHGFVWMDHLQRKRRLPDAKDRSAKGHYSAVFTQSTNARVQG 623 Query: 851 TAADIIKRAMIAVDAWLQAE----QPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMEN 906 +AA K MIA+ + + R+ VHDE + V K +M N Sbjct: 624 SAAIQTKATMIALQELCDRKTAEGRGEWRLWCVVHDEALLLVPDTLTQQDVKDFEDVMVN 683 Query: 907 CTRL-DVPLLVEVGSGENWDQ 926 ++P ++ W + Sbjct: 684 TYVFGNIPNKTDIEISRRWGE 704 >UniRef50_C0E6N1 Putative uncharacterized protein n=1 Tax=Corynebacterium matruchotii ATCC 33806 RepID=C0E6N1_9CORY Length = 893 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 169/595 (28%), Positives = 260/595 (43%), Gaps = 57/595 (9%) Query: 17 YLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKTFRDELF 74 +RA++A P T S G+ T A+YG L+ML +L+ +PTH AV FD TFR E+F Sbjct: 1 MAFRAFYALPTEKFTTSTGQATNAIYGFLSMLATLLHDEQPTHVAVAFDVGRTTFRTEMF 60 Query: 75 EHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKAGRPVLI 134 YK+ R P + +QI L ++ A+G+ + EADD+I TLA A+ G LI Sbjct: 61 PDYKAQRDETPPEFISQIPILKNLLTALGITTIEKPNYEADDIIATLATTAQPLGFETLI 120 Query: 135 STGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPELIIDFLALMGDSSDNI 190 TGD+D QLV T++ M P+ V +KYG+ PE DF AL GD SDN+ Sbjct: 121 VTGDRDSLQLVNNTTTVLYPMKGVSVIHRFTPQAVQDKYGLTPEQYPDFAALRGDPSDNL 180 Query: 191 PGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQLA 250 P +P VGEKTA + G L L + I G+ + L + + L+ QL Sbjct: 181 PSIPKVGEKTATKWIVQHGNLTNLLNNADTIKGV-------VGTNLRERIDQVKLNRQLT 233 Query: 251 TIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAKPQE 310 + +++L T +L++Q E L F EF G L+ K K + Sbjct: 234 EMVKNLDLTHTPPELKLQPVNTETLTEDFNNLEF---------GTTLRTKILKARGVTVD 284 Query: 311 TSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVG 370 T+ T IS ++ E + I + D E+ ++ + + + + Sbjct: 285 TTATPPQTPTTVDTISVAKWLKQHPTEAMAVHITG--RGTPATGDAESFAIIDQNHHAIA 342 Query: 371 LSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILAN 430 +FA L+ D + L+ +P K + K +LA Sbjct: 343 GNFA--------------DLNPKDDKALADYLQSTQP--------KFLHDAKTTYHMLAG 380 Query: 431 YGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIA 490 GI L GIA DT L +Y+LN +D+ + +R L H+T+ E +T Sbjct: 381 RGITLGGIAHDTALAAYLLNPGQRTYDLKTTYQRHL-HRTLEITETGQLSLLDITNTNTL 439 Query: 491 LEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPK 550 + A + P L ++ ++E+PL +L+ +E G+ +D Sbjct: 440 ITAAAA---------ILELAATLPTKLATINELELYLDLELPLTTILAEMEATGIAVDIP 490 Query: 551 VLHNHSEELTLRLAELEKKAHEIAGEE-FNLSSTKQLQTILFEKQGIKPLKKTPG 604 L + T + + E A IAG+ L+S KQLQ +LFE G+ KK Sbjct: 491 TLEEQLDTFTNLVTQEETAARTIAGDPNLLLTSPKQLQVVLFETLGLPKTKKNQN 545 >UniRef50_UPI0000D572BA PREDICTED: similar to DNA polymerase theta n=1 Tax=Tribolium castaneum RepID=UPI0000D572BA Length = 1588 Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats. Identities = 182/678 (26%), Positives = 309/678 (45%), Gaps = 72/678 (10%) Query: 276 LGLFK-KYEFKRWTADVEAGKW-LQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTI 333 + + K V+ L + G A P E+ + T +S++ Sbjct: 950 REFLRIEMGLKEAKWAVKTNDISLNSTGDVIVASPDESYSFKTPKKRTKRRLSHE----- 1004 Query: 334 LDEETLKAWIAKLEKAPVFAFDTETDSLDN--ISANLVGLSFAIEPGV------------ 379 + I LE V A D DS + SANLV L+FA P Sbjct: 1005 -TPVKKQRTIFNLETVDVCAHDLLFDSFRHEIKSANLVALAFASCPTKQGRTIGLNHTIK 1063 Query: 380 AAYIPV-------AHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILA-NY 431 + +P+ H D + ++L++ ++ +++ + N K L + Sbjct: 1064 SPEVPISGFALFWGHSTAYYLDVAKKRETIDLIRHIVNEQQKTIIMYNCKQQIKTLHKWH 1123 Query: 432 GIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIAL 491 G+E R D + ++L + L E + + G+ + Sbjct: 1124 GVEFRSRVHDPKVADWLLQPEGQDKTLHQLVETYCPELPLD----QGQDAKLRSI----- 1174 Query: 492 EEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKV 551 + L H+ +++ K L + EM ++ +L+ IE G+ + Sbjct: 1175 ----------FECYLSWHVLKNIEVELSKSNLLTVFDTEMSIMRILANIELAGIGANVST 1224 Query: 552 LHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSE 611 L N + LT L +E++ H IAG F+ +S++QL IL S+ Sbjct: 1225 LSNLVDLLTRELKAIERQGHAIAGRHFSFASSRQLAKILQSDNN--------------SK 1270 Query: 612 EVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSS 671 + L++ D PL +IL++R ++ L ++ + GR+ Y TATGR++ Sbjct: 1271 KSLQK--NDNPLASLILKWRKISATIGKTLQPLIRLV--ENGRIFGCY-VTHTATGRITM 1325 Query: 672 TDPNLQNIPVRNEEG---RRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFA 728 +PNLQN+ + R+AF+ + +V+VSAD+ Q+ELR++AHLSRD+ L Sbjct: 1326 HEPNLQNVAKDFDIDGVEVSCRKAFVPSQGHVMVSADFCQLELRVLAHLSRDEVLGGILR 1385 Query: 729 EGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYM 788 DI RA AA+ + VT E R+ AK I +G+IYGM + LA QLN +A ++M Sbjct: 1386 RKGDIFRAIAAKWNNISENEVTEELRQRAKQIIYGIIYGMGSKALAEQLNTDEAQATRFM 1445 Query: 789 DLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPM 848 + YPGV +Y+ ++ G+VETL GRR +L I NGA ++ AER A+N + Sbjct: 1446 QTFRNAYPGVQKYISEIIETCRKTGFVETLAGRRRFLAHINHKNGAVKSQAERQAVNTTI 1505 Query: 849 QGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCT 908 QG+AAD++K AM+ ++ E+ V++++ +HDEL++EV + + + + + ME Sbjct: 1506 QGSAADLVKMAMVRLETVFLGEK-EVKLVLHLHDELLYEVPEGSLGSFVRILKTEMEGSV 1564 Query: 909 RLDVPLLVEVGSGENWDQ 926 +L +P V+V SG +W Q Sbjct: 1565 KLSIPFPVKVKSGPSWGQ 1582 >UniRef50_B4KC49 GI21961 n=1 Tax=Drosophila mojavensis RepID=B4KC49_DROMO Length = 2181 Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats. Identities = 170/586 (29%), Positives = 281/586 (47%), Gaps = 38/586 (6%) Query: 365 SANLVGLSFAIEPGVAAYIPVAHDYLDAPDQ--ISRERALELLKPLLEDEKALKVGQNLK 422 S+ L G++F + V Y+ + + Q + E ++ L LL + + + K Sbjct: 1604 SSYLAGIAFCLNDNVVYYMNMQPEEEQQQQQQQVGSELKVQQLSSLLSRQDLTLLSHDAK 1663 Query: 423 YDRGILANYGIELRGI---AFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 +L +L I D + +++L ++ +++ + + G Sbjct: 1664 EQLKVLRQAVPQLNDIQVLLEDPKVANWLLQPDKTL-SFHNMCQQFAP-ECGALANLCGS 1721 Query: 480 GKNQLTF--NQIALEEAGRYAAEDADVTLQLHLKMWPDLQK--HKGPLNVFENIEMPLVP 535 G+ +F + + A A+ +A VT+ + +L++ L F +EMP+ Sbjct: 1722 GRGYSSFGLDASSAIMAKVRASIEACVTVHILNGQLENLERIGTGQLLKFFRELEMPIQM 1781 Query: 536 VLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG 595 L +E G L +++ + LE K +E+ G FNL ST+ + +L Sbjct: 1782 SLCHMECIGFPAKEHSLQRLFQQMMATMKRLESKIYELHGSRFNLGSTQAVAKVL----- 1836 Query: 596 IKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRV 655 L + G STS ++LE++ D P+ ++IL YR L+ L + PL+ + RV Sbjct: 1837 --GLHRKANGRVSTSRQILEKI--DSPISQLILNYRKLSMLLAKSMQ--PLLKCCQANRV 1890 Query: 656 HTSYHQAVTATGRLSSTDPNLQNI--PVRNEEGRR-----IRQAFIA-PEDYVIVSADYS 707 H TATGR+S ++PNLQN+ E G+ R AF E ++SAD+ Sbjct: 1891 HGQ-SITYTATGRISMSEPNLQNVAKDFHIELGKEQLKISCRSAFAPMDEKRCLISADFC 1949 Query: 708 QIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYG 767 Q+E+RI+AHLS+DK LL +D+ A AA + V+ + R K I +G++YG Sbjct: 1950 QLEMRILAHLSQDKALLQVMNSTQDLFTAIAAHWNKIDESNVSEQLRNGTKQICYGIVYG 2009 Query: 768 MSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPD 827 M L+ L +EAQ + + YPG+ Y + A+ GYVET+ GRR YL Sbjct: 2010 MGMRSLSEALKCTEQEAQMITEQFHLAYPGIKAYTMKVVKFARNNGYVETITGRRRYLDH 2069 Query: 828 IKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPR-------VRMIMQV 880 I S + AER AIN+ +QG+AADI K A++ ++ L + + V +++ + Sbjct: 2070 INSGEVQLKTQAERQAINSTIQGSAADIAKSAILRMEKNLGRYREKLGLAKNAVNLVLHL 2129 Query: 881 HDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 HDEL+FEV D VAK + MENC +L+VPL V++ G +W + Sbjct: 2130 HDELIFEVPTDKAKKVAKVLSLTMENCVKLNVPLRVKLKIGRSWGE 2175 >UniRef50_O75417 DNA polymerase theta n=30 Tax=Deuterostomia RepID=DPOLQ_HUMAN Length = 1762 Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats. Identities = 179/686 (26%), Positives = 292/686 (42%), Gaps = 128/686 (18%) Query: 368 LVGLSFAIEPGVAAYIPV----AHDYLDA---PDQISRE-------RALELLKPLLEDEK 413 +VGL+ A Y + H + A P + L+ D++ Sbjct: 1072 VVGLAVCWGGRDAYYFSLQKEQKHSEISASLVPPSLDPSLTLKDRMWYLQSCLRKESDKE 1131 Query: 414 ALKVGQNLKYDRGILA-NYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTIT 472 V + IL + GI L D + ++L+ + + S+ +L H+ Sbjct: 1132 CSVVIYDFIQSYKILLLSCGISLEQSYEDPKVACWLLDPDSQEPTLHSIVTSFLPHELPL 1191 Query: 473 FEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMP 532 E + Q E +GRY A + + + L + + +VF +EMP Sbjct: 1192 LEGMETSQGIQSLGLNAGSEHSGRYRASVESILIFNSMNQLNSLLQKENLQDVFRKVEMP 1251 Query: 533 LVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFE 592 L+ +E NG+ + + +L +E +A+++AG F+ +S+ + +LF Sbjct: 1252 SQYCLALLELNGIGFSTAECESQKHIMQAKLDAIETQAYQLAGHSFSFTSSDDIAEVLFL 1311 Query: 593 KQGIKPLKKTP-----------------------GGAPSTSEEVLEELALDYPLPKVILE 629 + + P ++ G STS++VL +L +PLP +ILE Sbjct: 1312 ELKLPPNREMKNQGSKKTLGSTRRGIDNGRKLRLGRQFSTSKDVLNKLKALHPLPGLILE 1371 Query: 630 YRGLAKLKSTYTDKLP--LMINPKTG--RVHTSYHQAVTATGRLSSTDPNLQNIPVRNE- 684 +R + + L +NP G R++ Q+ TATGR++ T+PN+QN+P E Sbjct: 1372 WRRITNAITKVVFPLQREKCLNPFLGMERIYP-VSQSHTATGRITFTEPNIQNVPRDFEI 1430 Query: 685 ---------------------------------------------------EGRRIRQAF 693 +R AF Sbjct: 1431 KMPTLVGESPPSQAVGKGLLPMGRGKYKKGFSVNPRCQAQMEERAADRGMPFSISMRHAF 1490 Query: 694 IAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQ 753 + I++ADYSQ+ELRI+AHLS D+ L+ G D+ R+ AAE + E+V + Sbjct: 1491 VPFPGGSILAADYSQLELRILAHLSHDRRLIQVLNTGADVFRSIAAEWKMIEPESVGDDL 1550 Query: 754 RRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQG 813 R+ AK I +G+IYGM A L Q+ I +A Y+D + RY G+ ++M T K G Sbjct: 1551 RQQAKQICYGIIYGMGAKSLGEQMGIKENDAACYIDSFKSRYTGINQFMTETVKNCKRDG 1610 Query: 814 YVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPR 873 +V+T+ GRR YLP IK +N R+A AER AIN +QG+AADI+K A + + L+ Sbjct: 1611 FVQTILGRRRYLPGIKDNNPYRKAHAERQAINTIVQGSAADIVKIATVNIQKQLETFHST 1670 Query: 874 VR---------------------------------MIMQVHDELVFEVHKDDVDAVAKQI 900 + I+Q+HDEL++EV ++DV VA+ + Sbjct: 1671 FKSHGHREGMLQSDRTGLSRKRKLQGMFCPIRGGFFILQLHDELLYEVVEEDVVQVAQIV 1730 Query: 901 HQLMENCTRLDVPLLVEVGSGENWDQ 926 ME+ +L V L V+V G +W + Sbjct: 1731 KNEMESAVKLSVKLKVKVKIGASWGE 1756 >UniRef50_Q1ARA6 DNA polymerase I n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ARA6_RUBXD Length = 582 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 195/614 (31%), Positives = 286/614 (46%), Gaps = 58/614 (9%) Query: 329 NYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHD 388 + I E L+ L A D E L + A + L A G + V Sbjct: 7 AFRLITGPEGLREAARALAGARRVGLDIEATGLSPLDARMRLLQLAAG-GETFVVDV--- 62 Query: 389 YLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGIL-ANYGIELRGIAFDTMLESY 447 + D ALE LKV N KYD L A +GI L FDTML + Sbjct: 63 -FEVKDLSPLREALE--------GGPLKVLHNAKYDYSFLLAQHGIRLS-PLFDTMLAAQ 112 Query: 448 ILNSVA--GRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVT 505 +L+ + ++++A R+L +E K + +++ E YAA DA + Sbjct: 113 LLDGGEQGPSYSLEAVAGRYL-------QETVDKTARREDWSKELSREQLEYAARDAAIL 165 Query: 506 LQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAE 565 L LH ++ L++ L IE VP ++ +E G+++D + + R E Sbjct: 166 LPLHERLQELLEREG--LGPVSRIEFGAVPAIAEMELAGIRLDVRRWRELERVVRRRRDE 223 Query: 566 LEKKAHEI------------AGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEV 613 ++ G NL+S +Q+ + P T Sbjct: 224 AARRLESHFPQPEGVLPLEGLGPRLNLNSPQQIMEAF---------RSIGIELPDTRMWT 274 Query: 614 LEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTD 673 L L +D+P + +LEYR L K TY + ++PKTGR+H S+ Q TGRL+ T+ Sbjct: 275 L--LTVDHPAARDLLEYRELQKKLGTYLETYEGFVHPKTGRIHASFLQCRVPTGRLACTN 332 Query: 674 PNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDI 733 PN+Q IP +E R+ F+A E V+V ADYSQIELRI+A +S D G + AF G+D+ Sbjct: 333 PNVQQIPHEDE----FRRCFVAGEGNVLVIADYSQIELRILAEVSGDPGFVEAFRRGEDL 388 Query: 734 HRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFE 793 HR TAA +FG+P E VT EQR +AK INFGL YG LA QL + A++ +D YF Sbjct: 389 HRVTAATMFGVPKEEVTKEQRSAAKRINFGLAYGRGPRSLAAQLGTDEERARRLIDEYFA 448 Query: 794 RYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAA 853 Y V Y+ T +A ++G + TL GR + + A R A +R A+N P+QGT+A Sbjct: 449 TYGRVQRYLNETANRALKEGALRTLSGRLRKFGRTRGLSSAERGALKREAMNYPIQGTSA 508 Query: 854 DIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTR---L 910 DI K A+I + + L+ R+I +HDE V E ++ + A ++ M Sbjct: 509 DIAKLALIFIHSELR--DLDARLINCIHDEFVVECAEEQAEEAASRVRSAMVRAGERLLK 566 Query: 911 DVPLLVEVGSGENW 924 VP+ VEV W Sbjct: 567 RVPVEVEVAVSREW 580 >UniRef50_A9U2H4 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U2H4_PHYPA Length = 1683 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 190/733 (25%), Positives = 311/733 (42%), Gaps = 101/733 (13%) Query: 285 KRWTADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTIL-DEETLKAWI 343 K+ + E+ LQ + P+ + Q + P+ + D + +E L+ W Sbjct: 952 KKDILEKESDLLLQKLESIPSFRVQNSKDPISTPDEVPSRGPRDVDKLVGGFDEFLRRWQ 1011 Query: 344 AKLEKAPVFAFDTETDSL-DNISANLVGLSFAIEPGVAAYIPVA--HDYLD---APDQIS 397 E A F F T L D ++G++ + Y+ ++ H P+ + Sbjct: 1012 GVDEFAFDFYFRTPRKGLPDPF--EVMGVAICWKDSPVYYVNLSIVHKSFQHATNPNCGN 1069 Query: 398 RERALELLKP--------------LLEDEKALKVGQNLKYDRGILANYG----------- 432 +E + + +L K+ +LK +L N G Sbjct: 1070 KEVIIREVNSSLIESQTRWRHVGTMLSKTGVRKISWDLKIQLQVLNNPGLHVPSARQTTE 1129 Query: 433 --------------------IELRGIAFDTMLESYILNSVAGRHDMDSL---AERWLKHK 469 I ++ DT + +++L + SL ++ L + Sbjct: 1130 HERGVPDVKAREGEVVALPSIRVQMPCIDTRVAAWLLWPDEESTRLLSLEQEVKKRLPGE 1189 Query: 470 TITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENI 529 AG+ NQ+ A LH W L G + Sbjct: 1190 IAAAAGRAGRWANQMGC------VAHNGCCRRVAQIWVLHCAFWKLLVAE-GLHEALLQL 1242 Query: 530 EMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTI 589 EMPLV VL+ +E + +D +V L +L ELE + ++AG F+LS+ ++ + Sbjct: 1243 EMPLVRVLADMETWSLGLDMRVCRKAQSHLHCKLRELEAQGEKLAGMSFSLSAPAEVAHV 1302 Query: 590 LFEKQGIKPLKKTPGGA-PSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMI 648 L+ + G PST ++ LE L +P+ +I E+R L+KL + + Sbjct: 1303 LYRHLKLPVPPGCKGKHHPSTDKQALEFLRNHHPIADIIKEHRSLSKLLQSTLGSIIAWA 1362 Query: 649 NP---------KTGR-----VHTSYHQAVTATGRLSSTDPNLQNIPV----RNEEGRRI- 689 ++ R + + Q TATGRLS DPNLQ + E GR + Sbjct: 1363 KSPEPLFSSQERSSRGEIFSIAGHWLQTSTATGRLSMEDPNLQCVEHAVSFTIEGGRSLD 1422 Query: 690 --------------RQAFIA-PEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEG-KDI 733 RQAF+ E ++++SADYSQIELR+MAH S D L++ + D+ Sbjct: 1423 GDQEKANNVVEVNARQAFVPSQEGWILLSADYSQIELRLMAHFSGDPSLVSLLSHPTGDL 1482 Query: 734 HRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFE 793 R AA+ GLP+ V+ +QR K + +G++YGM LA L P EAQ ++ + Sbjct: 1483 FRVLAAQWTGLPMCEVSDKQRERTKRLVYGILYGMGVNTLAEHLECPVAEAQVMLERFKG 1542 Query: 794 RYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAA 853 +P V ++ +++GY+ TL GR+ YL I + +A AER A+N+ QG+AA Sbjct: 1543 TFPLVTTWLSHAVDSCRQKGYITTLSGRKRYLDKINTGKWGEQAKAERQAVNSICQGSAA 1602 Query: 854 DIIKRAMIAVDAWL-QAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDV 912 D+IK AMI V + + Q R+++Q+HDEL+ EV K + VA+ + ME L V Sbjct: 1603 DLIKLAMIKVHDAISSSHQGSCRLLLQIHDELLLEVDKRVLKHVAQILRSSMEGAITLRV 1662 Query: 913 PLLVEVGSGENWD 925 PL ++ G +W Sbjct: 1663 PLRTKLQVGTSWG 1675 >UniRef50_B4NI17 GK13557 n=1 Tax=Drosophila willistoni RepID=B4NI17_DROWI Length = 2080 Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats. Identities = 160/576 (27%), Positives = 279/576 (48%), Gaps = 36/576 (6%) Query: 371 LSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILAN 430 LSF + VA Y+ + + + + + +E L LL + + + K IL + Sbjct: 1513 LSFCLADNVAYYMNMQQEG--KKEAVGTQLKVEELVKLLTRPELTLIMHDGKEQLKILRH 1570 Query: 431 Y---GIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKH-KTITFEEIAGKGKNQLTF 486 + + D + +++L ++ +++ K +T +G+G + Sbjct: 1571 AMPQLVRIAIKLEDPKVANWLLQPDK-VLSFHNMCQQFAPECKGLTDLCGSGRGYSSYGL 1629 Query: 487 NQIALEEAGRYAAEDADVTLQLHLKMWPDLQK--HKGPLNVFENIEMPLVPVLSRIERNG 544 + A+ +A V++ + +L++ L F ++EMP+ L +E G Sbjct: 1630 DASNAILPKIRASVEACVSMHILHGQIENLERIGTGQLLKFFRDLEMPIQLSLCNMEFTG 1689 Query: 545 VKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPG 604 + L S+++ + +LE K +E+ G FNL S++ + +L L + Sbjct: 1690 FPAKQESLQGLSQQMLSTMKKLEAKIYELHGSRFNLGSSQAVAKVL-------GLHRKAS 1742 Query: 605 GAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVT 664 G STS ++LE+L D P+ ++I+ YR L+ + + PL+ + RV+ + T Sbjct: 1743 GKVSTSRQILEKL--DSPISQLIVGYRKLSTVLAKNVQ--PLLKCCQDNRVYGQ-SLSYT 1797 Query: 665 ATGRLSSTDPNLQNIPVR-------NEEGRRIRQAFIAPE-DYVIVSADYSQIELRIMAH 716 ATGR+S ++PNLQN+ ++ R AF+ + ++SAD+ Q+E+RI+AH Sbjct: 1798 ATGRISMSEPNLQNVAKDFEINLDSDKVNISCRSAFLPMDFKRCLISADFCQLEMRILAH 1857 Query: 717 LSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQ 776 LS+D LL +D+ A AA + V+ R K I +G++YGM LA Sbjct: 1858 LSQDPALLEVMNSPRDLFTAIAARWNHMNESEVSENLRNGTKQICYGIVYGMGMRSLAES 1917 Query: 777 LNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARR 836 L EAQ + + + Y G+ Y+++ A+ GYVET+ GRR YL I S + Sbjct: 1918 LKCTENEAQTVSEQFHQTYAGISAYIQKVVKFARNNGYVETITGRRRYLEHINSGELQIK 1977 Query: 837 AAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPR-------VRMIMQVHDELVFEVH 889 AER AIN+ +QG+AADI K A++ ++ L + R V +++ +HDEL+FEV Sbjct: 1978 NQAERQAINSTIQGSAADIAKSAILRMEKHLLRYRERLGITENSVNLVLHLHDELIFEVP 2037 Query: 890 KDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWD 925 D +AK + ME+C +L VPL V++ G +W Sbjct: 2038 IDKAKKIAKVLSLTMESCVKLSVPLKVKLKIGRSWG 2073 >UniRef50_B4MBB7 GJ14321 n=1 Tax=Drosophila virilis RepID=B4MBB7_DROVI Length = 2086 Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats. Identities = 167/583 (28%), Positives = 287/583 (49%), Gaps = 36/583 (6%) Query: 366 ANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDR 425 A L G++F + VA Y+ + + +S E+ +ELL LL + + + K Sbjct: 1512 AYLAGIAFCLSDNVAFYMNMQAEEELEQQPVSTEQKVELLCSLLSRPELTLLIHDGKDQL 1571 Query: 426 GILANYGIELRGI---AFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 L +L+G+ D + +++L ++ +++ T + G G+ Sbjct: 1572 KALRQALPQLKGMQVKLEDPKVGNWLLQPDKTL-SFQNMCQQFAPECT-ALSHLCGSGRG 1629 Query: 483 QLTFN-QIALEEAGRY-AAEDADVTLQLHLKMWPDLQK--HKGPLNVFENIEMPLVPVLS 538 ++ + G+ A+ +A +++ + +L++ L F +EMP+ L Sbjct: 1630 YSSYGLDASSAILGKVRASIEACLSVHILNGQLENLERIGTGQLLKFFRELEMPIQMSLC 1689 Query: 539 RIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKP 598 +E G + L +++ + +LE K E+ G FNL ST+ + +L Sbjct: 1690 NMECLGFPAQEQRLQRLLQQMLATMKKLEVKIFELHGSRFNLGSTQAVAKVL-------G 1742 Query: 599 LKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTS 658 L + G STS ++LE+L D P+ ++IL++R L+ + + PL+ + RVH Sbjct: 1743 LHRKANGRISTSRQILEKL--DSPISQLILDHRKLSMVLAKNMQ--PLLKCCQANRVHGQ 1798 Query: 659 YHQAVTATGRLSSTDPNLQNIPV-------RNEEGRRIRQAFIAP-EDYVIVSADYSQIE 710 TATGR+S ++PNLQN+ + + R AF++ E + ++SAD+ Q+E Sbjct: 1799 -SITYTATGRISMSEPNLQNVAKDFLVDLGQEKINISCRSAFVSSNEKHCLLSADFCQLE 1857 Query: 711 LRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSA 770 +RI+AHLS+DK LL +D+ A AA + V+ + R K I +G++YGM Sbjct: 1858 MRILAHLSQDKALLKVMNSPQDLFTAIAAHWNKIAESDVSEQLRNGTKQICYGIVYGMGM 1917 Query: 771 FGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKS 830 LA L +EAQ + + Y G+ Y + A+ GYVET+ GRR YL I S Sbjct: 1918 RSLAESLKCTEQEAQMISEQFHLAYAGIKAYASKVVKFARNNGYVETITGRRRYLDHINS 1977 Query: 831 SNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPR-------VRMIMQVHDE 883 + AER AIN+ +QG+AADI K A++ ++ + + + V +++ +HDE Sbjct: 1978 GEPQLKNQAERQAINSTIQGSAADIAKSAILRMEKNIARYREKLGLAENAVNLVLHLHDE 2037 Query: 884 LVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 L+FEV D VAK + MENC +L+VPL V++ G +W + Sbjct: 2038 LIFEVPADKAKKVAKVLSLTMENCVKLNVPLRVKLKIGRSWGE 2080 >UniRef50_P30314 DNA polymerase n=4 Tax=Caudovirales RepID=DPOL_BPSP1 Length = 924 Score = 420 bits (1081), Expect = e-115, Method: Composition-based stats. Identities = 206/740 (27%), Positives = 337/740 (45%), Gaps = 92/740 (12%) Query: 262 CEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAKPQETSVADEAPEVT 321 +Q + Q ++L L E K +V A + E E P + Sbjct: 149 LKQPKYQDFFIKDLEILASLLEGKT-PKNVLAFTKERRYCDTFEDAIDEIKRYLELPAGS 207 Query: 322 ATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAA 381 VI + T E + LE P+ + +VG+ + G Sbjct: 208 RVVIDLETVKTNPFIEKVTMKKTTLEAYPM-----------SQQPKIVGIGLSDRSGYGC 256 Query: 382 YIPVAH-DYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGIL-ANYGIELRGIA 439 IP+ H + L +QI ++ L+ LLE E + N K+D L A+ I L Sbjct: 257 AIPLYHRENLMKGNQIG--TIVKFLRKLLEREDLEFIAHNGKFDIRWLRASLDIYLDISI 314 Query: 440 FDTMLESYILNSVAGRHDM-DSLAERWLKHKTITFEEIAG----KGKNQLTFNQIALEEA 494 +DTML +I++ R+ LA WL+ +++ KG+++ ++ I + Sbjct: 315 WDTMLI-HIIDYRGERYSWSKRLA--WLETDMGGYDDALDGEKPKGEDEGNYDLIPWDIL 371 Query: 495 GRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHN 554 Y A+D DVT +L K P +++++ ++ENI +P L IE +G+ +D + L Sbjct: 372 KVYLADDCDVTFRLSEKYIPLVEENEEKKWLWENIMVPGYYTLLDIEMDGIHVDREWLEV 431 Query: 555 HSEELTLRLAELEKKAHEI----------------------------------------- 573 ++ LE K E Sbjct: 432 LRVSYEKEISRLEDKMREFPEGVAMEREMRDKWKERVMIGNIKSANRTPEQQDKFKKYKK 491 Query: 574 -----AGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVIL 628 G++ N STKQL +LFE+ G++ + T GAPST+++ L+ + KV++ Sbjct: 492 YDPSKGGDKINFGSTKQLGELLFERMGLETVIFTDKGAPSTNDDSLKFMGSQSDFVKVLM 551 Query: 629 EYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVR------ 682 E+R L + + KL LMI+P VH SY+ T TGRLSS +PN Q P + Sbjct: 552 EFRKANHLYNNFVSKLSLMIDP-DNIVHPSYNIHGTVTGRLSSNEPNAQQFPRKVNTPTL 610 Query: 683 NEEGRRIRQAFIAP--EDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAE 740 + I++ F + + VIV DYSQ+ELRI+ + + G D+H+A A++ Sbjct: 611 FQYNFEIKKMFNSRFGDGGVIVQFDYSQLELRILVCYYSRPYTIDLYRSGADLHKAVASD 670 Query: 741 VFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLN-----IPRKEAQKYMDLYFERY 795 FG+ +E V+ +QR ++K I FG++Y SA GL+ L + E + ++ YF+R+ Sbjct: 671 AFGVAIEEVSKDQRTASKKIQFGIVYQESARGLSEDLRAEGITMSEDECEIFIKKYFKRF 730 Query: 796 PGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADI 855 P V +++ T+ K+ V+TL G LPDI S + ++ AER A+N P+QGT +D Sbjct: 731 PKVSKWIRDTKKHVKDISTVKTLTGATRNLPDIDSIDQSKANEAERQAVNTPIQGTGSDC 790 Query: 856 IKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRL----- 910 ++I ++ WL+ R R+ + VHD +V + KD+V VAK++ +MEN Sbjct: 791 TLMSLILINQWLRESGLRSRICITVHDSIVLDCPKDEVLEVAKKVKHIMENLGEYNEFYK 850 Query: 911 ---DVPLLVEVGSGENWDQA 927 DVP+L E+ G N+ A Sbjct: 851 FLGDVPILSEMEIGRNYGDA 870 >UniRef50_UPI000174344B DNA polymerase I n=4 Tax=candidate division TM7 RepID=UPI000174344B Length = 552 Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 183/636 (28%), Positives = 285/636 (44%), Gaps = 90/636 (14%) Query: 141 MAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLALMGDSSDNIPGVPGV 196 M QLV+P + P + NK G+ +D AL GDSSDNIPGVPG+ Sbjct: 1 MLQLVSPLTKVYAMKRGLSNIEEYNPSILENKLGIKVSQFLDLKALKGDSSDNIPGVPGI 60 Query: 197 GEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQLATIKTDV 256 G+KTA ALL+ LD +Y E I A KL KE AY+S ++ I D Sbjct: 61 GDKTAVALLKEFESLDNIYKNIEIIK-------PAWAKKLLAGKESAYISRKVGQIWRDA 113 Query: 257 ELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAKPQETSVADE 316 ++ + +++ +L +K EF + + + P + D Sbjct: 114 PVDFDLKSMDIHNLDVVKLSDQLRKLEFNSLIKRLPTAMQDENLN-RGLYIPPVSETVDI 172 Query: 317 APEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIE 376 +P + +S + V I+D++ + A Sbjct: 173 SPLTSKIKLSAETVVHIIDDK---------------------------------IIIAPN 199 Query: 377 PGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELR 436 A V + D IS + ++K L I + Sbjct: 200 RSKAFICDVTNASDLVFDLIS---------------TTKMICYDVKDTLHKLNALNINIV 244 Query: 437 -GIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAG 495 FD S++++ + + S+ + Sbjct: 245 VDKVFDIKQASFLIDPLIRDRSLSSIVVGEIDESNP------------------------ 280 Query: 496 RYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNH 555 A + + K + + + PL P+L ++E+ GVKI+ L + Sbjct: 281 ---AVVITAIWNAYDTQMEKFKNDKILYKIATDFDFPLAPLLFKMEKRGVKINTSYLADM 337 Query: 556 SEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGA-PSTSEEVL 614 S E+ + EL++K +IAG FN++S QL +LF K + G ST ++ L Sbjct: 338 SHEIGKKYEELQQKIFDIAGYNFNIASPAQLSDMLFIKLQLPTTGIKKGKTGYSTGQKEL 397 Query: 615 EELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDP 674 +L +P+ ++I + R LAKLK+TY D LP +++ K R+HT+++Q V +TGRLSST P Sbjct: 398 NKLRGLHPVIELIEQTRELAKLKNTYVDALPKLVD-KNYRLHTTFNQDVVSTGRLSSTHP 456 Query: 675 NLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIH 734 NLQNIP+R+ G++IR AFIA ED ++VSADYSQ ELR+ A ++ D+ L+ F DIH Sbjct: 457 NLQNIPIRSTLGKKIRNAFIADEDNILVSADYSQFELRLAAIMAGDEDLINDFNNDIDIH 516 Query: 735 RATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSA 770 TA++V+ +P++ VTS QRR+AK INFG++YGMS Sbjct: 517 TKTASDVYKIPMDQVTSNQRRNAKVINFGVLYGMSP 552 >UniRef50_A7AQX3 DNA polymerase I, putative n=1 Tax=Babesia bovis RepID=A7AQX3_BABBO Length = 1613 Score = 417 bits (1073), Expect = e-115, Method: Composition-based stats. Identities = 169/611 (27%), Positives = 285/611 (46%), Gaps = 55/611 (9%) Query: 333 ILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDA 392 + + E+L++ E + D ET L++ + L + + I V + Sbjct: 1040 VNNPESLESLAPLFEHTKLCTLDIETTGLNHREDRIRLLQISTPDQPSVVIDVFKVPVP- 1098 Query: 393 PDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSV 452 + + L+K L +A+KV N K+D L++ G ++G FDTM+ + +L++ Sbjct: 1099 ----TLKECTWLVK--LLGSQAVKVLHNGKFDINFLSHNGFNVKGPIFDTMIAAKLLSAT 1152 Query: 453 AGRHD--MDSLAERWLKHKTITFEEIAGKGKNQLTFNQIAL-EEAGRYAAEDADVTLQLH 509 + +AER+L + K + + L EE YA+ D V L L+ Sbjct: 1153 RFNWSCKLGHVAERYLNI-------VLDKSQQFSDWTLDPLFEEQVIYASRDTAVLLPLY 1205 Query: 510 LKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKK 569 + L+ + L++ +IE V + ++E+NG+K+D L + L K Sbjct: 1206 FILQEKLKAER--LDMIADIENKCVLAVCQMEQNGIKVDLDKLKSLQAALDKENETAMKH 1263 Query: 570 AHEIAG----EEFNLSSTKQLQTILFEKQGIKPLKKTPGGA-PSTSEEVLEELALDYPLP 624 + G FN +S +Q+ L Q K + KT G TSE L +P Sbjct: 1264 LGDTLGVSSNPNFNYNSQRQILQAL---QQQKVMDKTRRGLIQDTSERTLSR-NTYHPAI 1319 Query: 625 KVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNE 684 + + EYR K + +T+K+P I+ TGR++ + +Q +GR S +PNLQ IP + Sbjct: 1320 QALREYRKTNKAVTAFTEKIPNHIDSATGRIYPNINQIGAESGRFSCDNPNLQQIPRDS- 1378 Query: 685 EGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGL 744 R R+ FIA + +V AD+SQIELRI A ++ D+ ++ A+ G+D+H TA+ V Sbjct: 1379 ---RFRECFIADKGNKLVIADFSQIELRIAADIAEDRRMIEAYNSGEDLHSLTASLVKNK 1435 Query: 745 PLETVTSEQRRSAKAINFGLIYGMSAFGLARQLN------IPRKEAQKYMDLYFERYPGV 798 P+ VT E+R+ AKA+NFGLI+GMS G + A++ D +F+ Y G+ Sbjct: 1436 PISEVTKEERQLAKAVNFGLIFGMSLAGFRNYAESCYGVVLSVPAAREIYDSFFKSYSGI 1495 Query: 799 LEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKR 858 + ER + A + V TL R + ++N P+QGT+ADI K Sbjct: 1496 TAWHERMK--AAKPISVRTLSNRLSVF----------DQFSFTRSLNYPVQGTSADITKE 1543 Query: 859 AMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTR--LD-VPLL 915 AM + + +MI+ +HDE++ EV + + + + + + ME L VP Sbjct: 1544 AMALLVDRVA--DISGKMILCIHDEIILEVPESNANKALEVLIETMETAGNKFLRYVPCK 1601 Query: 916 VEVGSGENWDQ 926 G++W + Sbjct: 1602 AMGSIGDSWAE 1612 >UniRef50_A5X572 DNA polymerase nu n=8 Tax=Euteleostomi RepID=A5X572_DANRE Length = 1146 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 156/518 (30%), Positives = 267/518 (51%), Gaps = 47/518 (9%) Query: 439 AFDTMLESYILNSVAGRHDMDSLAERWLKHK--TITFEEIAGKGKNQLTFNQIALEEAGR 496 D + +++L+ +L + H+ T + + + K + ++L Sbjct: 629 VMDPQIAAWLLDPADSSSCFQTLLSKHYTHQFTPTTLQPVLEQAKVTQVISNLSLLH--- 685 Query: 497 YAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHS 556 + +LH K+ + +G ++ IE ++PVL+ +E + +D + L S Sbjct: 686 ------KLMEELHYKL-----RTQGLWQLYSGIEQKMIPVLAAMESYKMHVDKEALKKTS 734 Query: 557 EELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG------IKPLKKTPGGAPSTS 610 E L +L +LE++AH+ AG++F +SS+ QL+ ILFEK K L KT STS Sbjct: 735 EMLGSKLKQLEQEAHQAAGQKFLVSSSAQLRLILFEKLRLHELCENKKLPKTVKQQQSTS 794 Query: 611 EEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLS 670 E L +L +PLPK+ILEYR + K+K+T+ D + + + + ++++Q T +GRLS Sbjct: 795 ETALLQLQKLHPLPKIILEYRQIHKIKTTFVDGI--LSCTRKTFISSTWNQTSTVSGRLS 852 Query: 671 STDPNLQNIPV---RNEEGRRI------------RQAFIAPEDYVIVSADYSQIELRIMA 715 + PN Q +P + + + I R FI E + +SAD+ Q+ELR++A Sbjct: 853 AKHPNFQALPKLPLQISKKQYIHGKASDIVTVHPRAMFIPREGWTFLSADFCQVELRLLA 912 Query: 716 HLSRDKGLLTAFAEGK-DIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLA 774 HLS D LL F + D AA+ G+ + V+ E R AK I + ++YG L+ Sbjct: 913 HLSADPQLLRIFQSPEADAFTMLAAQWKGVSEDRVSLEDREQAKRIVYSVVYGAGRERLS 972 Query: 775 RQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGA 834 L + +EA ++ D + + Y V +++ T + G+V ++ GRR +LP I S++ + Sbjct: 973 GILGVSAEEASRFQDSFLKTYREVPAFIQHTIQHCQSHGFVRSIMGRRRFLPHIHSADWS 1032 Query: 835 RRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVD 894 R AER A+N +QG+AAD+ K AMI + + + ++ R++ Q+HDEL+FEV +D Sbjct: 1033 LRNQAERQAVNFVLQGSAADLAKLAMIRICSQVSSDSQTARLVAQIHDELLFEVEISQLD 1092 Query: 895 AVAKQIHQLMEN-------CTRLDVPLLVEVGSGENWD 925 A + + ME+ L VPL V + +G +W Sbjct: 1093 QFAALVKKTMESLQHIEYLNVNLSVPLKVLLSTGRSWG 1130 >UniRef50_Q588V7 Helicase and polymerase containing protein TEBICHI n=7 Tax=Magnoliophyta RepID=Q588V7_ARATH Length = 2154 Score = 414 bits (1064), Expect = e-114, Method: Composition-based stats. Identities = 180/686 (26%), Positives = 301/686 (43%), Gaps = 106/686 (15%) Query: 339 LKAWIAKLEKAPVFAFDTETDSLDNISA----NLVGLSFAIEPGVAAYIPVAHDYLDAPD 394 +++ A F FD + L ++++ + G++ Y+ + D + Sbjct: 1468 FDSFLELWGSAGEFFFDLHYNKLQDLNSRISYEIHGIAICWNCSPVYYVNLNKDLPNLEC 1527 Query: 395 Q----------ISRERALEL-------------LKPLLEDEKALKVGQNLKYDRGILANY 431 I + L + ++ + K NLK +L + Sbjct: 1528 VEKQKLIEDAVIGKSEVLASHNMLDVIKSRWNKISKIMGNVNTRKFTWNLKVQIQVLKSP 1587 Query: 432 GIEL---------RGI-------------------AFDTMLESYILNSVAGRH---DMDS 460 I + GI D + +IL RH ++D Sbjct: 1588 AISIQRCTRLNLPEGIRDELVDGSWLMMPPLHTSHTIDMSIVIWILWPDEERHSNPNIDK 1647 Query: 461 LAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHK 520 ++ L + +G+ +NQ+ A T L +W L + Sbjct: 1648 EVKKRLSPEAAEAANRSGRWRNQIR------RVAHNGCCRRVAQTRALCSALWKILVSEE 1701 Query: 521 GPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNL 580 L IEMPLV VL+ +E G+ ID + L +L LEKKA E+AG F+L Sbjct: 1702 -LLQALTTIEMPLVNVLADMELWGIGIDIEGCLRARNILRDKLRSLEKKAFELAGMTFSL 1760 Query: 581 SSTKQLQTILFEKQGIKPLKKTPGGA--PSTSEEVLEELALDYPLPKVILEYRGLAKLKS 638 + + +LF + + + G PST + L+ L ++P+ +I E+R LAKL + Sbjct: 1761 HNPADIANVLFGQLKLPIPENQSKGKLHPSTDKHCLDLLRNEHPVVPIIKEHRTLAKLLN 1820 Query: 639 TYTDKL----PLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVR-----NEEGRRI 689 + L ++ + +H + Q TATGRLS +PNLQ++ ++ GR + Sbjct: 1821 CTLGSICSLAKLRLSTQRYTLHGRWLQTSTATGRLSIEEPNLQSVEHEVEFKLDKNGRDV 1880 Query: 690 -----------RQAFIA-PEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGK-DIHRA 736 R F+ E++++++ADYSQIELR+MAH SRD L++ ++ + D+ Sbjct: 1881 SSDADRYKINARDFFVPTQENWLLLTADYSQIELRLMAHFSRDSSLISKLSQPEGDVFTM 1940 Query: 737 TAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYP 796 AA+ G ++V+ R K + +G++YGM A LA QL EA++ + + +P Sbjct: 1941 IAAKWTGKAEDSVSPHDRDQTKRLIYGILYGMGANRLAEQLECTSDEAKEKIRSFKSSFP 2000 Query: 797 GVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADII 856 V ++ T + +E+GY++TL GRR +L IK N ++ A+R A+N+ QG+AADII Sbjct: 2001 AVTSWLNETISFCQEKGYIQTLKGRRRFLSKIKFGNAKEKSKAQRQAVNSMCQGSAADII 2060 Query: 857 KRAMIAVDAWLQAE-----------------QPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 K AMI + + + + + R R+++QVHDELV EV V A Sbjct: 2061 KIAMINIYSAIAEDVDTAASSSSSETRFHMLKGRCRILLQVHDELVLEVDPSYVKLAAML 2120 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWD 925 + MEN L VPL V++ G+ W Sbjct: 2121 LQTSMENAVSLLVPLHVKLKVGKTWG 2146 >UniRef50_C4Z601 DNA polymerase I n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z601_EUBE2 Length = 724 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 166/708 (23%), Positives = 309/708 (43%), Gaps = 69/708 (9%) Query: 280 KKYEFKRWTADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETL 339 + + + ++ + K + + + + + Y I E L Sbjct: 12 ESVDLEDLSSRLAHKKVCNINLKRNQNTLLKGLEVINELVKSGRLHAEGEYEIIRTPERL 71 Query: 340 KAWIAK-LEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLD---APDQ 395 K + L + D ET LD + LVG+ + Y+P H L Q Sbjct: 72 KEVMETYLTGVSEYVLDVETTGLDVYNDILVGICLYNPDLPSFYVPFNHTDLQNKRVEGQ 131 Query: 396 ISRERALELLKPLLEDEKALKVGQNLKYDRGILA-NYGIELRGIAFDTMLESYILNSVAG 454 ++ E ++ P L + + N+K+D ++ +G + + +DT + ++LN Sbjct: 132 MTEEECKAVMLPYLANGSLKCINHNIKFDDKVVTFQWGQRIANVWWDTNIAGWVLNENE- 190 Query: 455 RHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWP 514 +H + + +++ + + E+ G + N I ++ Y A D T L+ Sbjct: 191 KHGLKPMYNKYILNGEGSDED-FGDLFEGIPCNYIPIDIFAIYGANDGFKTWALYQFQKK 249 Query: 515 DLQKH------KGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEK 568 L++ + +VF +IEMPL+ V +E GV+I S + +AE EK Sbjct: 250 YLREDHPRADYRKLYHVFRDIEMPLIDVCMDMELRGVEIREDYAKELSVKFNAEMAEKEK 309 Query: 569 KAHEIAGE-------------------EFNLSSTKQLQTILFEKQGIKPLKKTPGGAPST 609 E + + N +S +Q+ + ++ +K + + T Sbjct: 310 LCDEYVAKFDKFIEENPTLMRLTKGTKKINYNSPQQVACLFYDIFKLKSV--SRKEPRGT 367 Query: 610 SEEVLEELA---------LDYPLPKVI---LEYRGLAKLKSTYTDKLPLMINPKTGRVHT 657 ++++++ + + Y+ L TY DK+P + KT VHT Sbjct: 368 GDKIVQQHRNKAKKAGTKKGEEFIQFLDNYQRYKECGNLLGTYIDKIPEVKCAKTNAVHT 427 Query: 658 SYHQAVTATGRLSSTD----PNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRI 713 +Y+Q TGR SS+D NLQNIP + IR+ F A + Y V D+SQIE R+ Sbjct: 428 TYNQYGAKTGRFSSSDTVTKINLQNIPSHE---KSIRKIFRARDGYKFVGGDFSQIEPRV 484 Query: 714 MAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETV------------TSEQRRSAKAIN 761 ++++S D+ + A+ EGKD++ ++V+G+P E +R + K++ Sbjct: 485 LSYVSGDEAMQEAYREGKDLYAIMGSKVYGVPYEDCREFYPDGTVNAEGKHRRTTMKSVL 544 Query: 762 FGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGR 821 G++Y A + Q + + AQK +D +++ +P + + + A+E GYV T+ GR Sbjct: 545 LGIMYERGAKAIGEQFDRSAEWAQKLIDDFYKSFPKIQQLRLKVEKMAEEYGYVTTIQGR 604 Query: 822 RLYLPD--IKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQ 879 + LP+ + + R A R ++NA +QG++ADI+K AMIA+ Q + M++ Sbjct: 605 KRRLPEMQLPDHDDYRYQEAHRQSLNAVIQGSSADIMKLAMIAIYNDPQYKALDCHMVIT 664 Query: 880 VHDELVFEVHKDDVDAVAKQIHQLMENCTR--LDVPLLVEVGSGENWD 925 VHDEL+ EV +D + A + M+ +D+P+ V+ + W Sbjct: 665 VHDELIMEVPEDHIKEGADLLVNTMKRVGHSLIDLPMSVDAEVNDYWY 712 >UniRef50_O18475 FI03732p n=5 Tax=melanogaster subgroup RepID=O18475_DROME Length = 2059 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 167/582 (28%), Positives = 282/582 (48%), Gaps = 38/582 (6%) Query: 368 LVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGI 427 + G+SF + VA Y + D A + ++ L L+ + V + K + Sbjct: 1487 ISGVSFCLADNVAYYWNMQIDERAAYQGVPTPLKVQELCNLMARKDLTLVMHDGKEQLKM 1546 Query: 428 LANYGIELRGIAF---DTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQL 484 L +L+ I+ D + +++L + ++ + + T + G G+ Sbjct: 1547 LRKAIPQLKRISAKLEDAKVANWLLQPDKTV-NFLNMCQTFAPECTG-LANLCGSGRGYS 1604 Query: 485 TF---NQIALEEAGRYAAEDADVTLQLHLKMWPDLQK--HKGPLNVFENIEMPLVPVLSR 539 ++ A+ R A E + VTL + +L + + L F +IEMP+ L + Sbjct: 1605 SYGLDTSSAILPRIRTAIE-SCVTLHILQGQTENLSRIGNGDLLKFFHDIEMPIQLTLCQ 1663 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 +E G + L + + + ++E K +E G FNL S++ + +L L Sbjct: 1664 MELVGFPAQKQRLQQLYQRMVAVMKKVETKIYEQHGSRFNLGSSQAVAKVL-------GL 1716 Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 + G +TS +VLE+L + P+ +IL YR L+ L + PLM + R+H Sbjct: 1717 HRKAKGRVTTSRQVLEKL--NSPISHLILGYRKLSGLLAKSIQ--PLMECCQADRIHGQ- 1771 Query: 660 HQAVTATGRLSSTDPNLQNIPVR-------NEEGRRIRQAFIA-PEDYVIVSADYSQIEL 711 TATGR+S T+PNLQN+ + R F+ E ++SAD+ Q+E+ Sbjct: 1772 SITYTATGRISMTEPNLQNVAKEFSIQVGSDVVHISCRSPFMPTDESRCLLSADFCQLEM 1831 Query: 712 RIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAF 771 RI+AH+S+DK LL +D+ A AA + VT + R S K + +G++YGM Sbjct: 1832 RILAHMSQDKALLEVMKSSQDLFIAIAAHWNKIEESEVTQDLRNSTKQVCYGIVYGMGMR 1891 Query: 772 GLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSS 831 LA LN +EA+ D + + Y G+ +Y R A+ +G+VET+ GRR YL +I S Sbjct: 1892 SLAESLNCSEQEARMISDQFHQAYKGIRDYTTRVVNFARSKGFVETITGRRRYLENINSD 1951 Query: 832 NGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPR-------VRMIMQVHDEL 884 + AER A+N+ +QG+AADI K A++ ++ ++ + + V ++M +HDEL Sbjct: 1952 VEHLKNQAERQAVNSTIQGSAADIAKNAILKMEKNIERYREKLALGDNSVDLVMHLHDEL 2011 Query: 885 VFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 +FEV +AK + MENC +L VPL V++ G +W + Sbjct: 2012 IFEVPTGKAKKIAKVLSLTMENCVKLSVPLKVKLRIGRSWGE 2053 >UniRef50_C3ZGQ2 DNA polymerase I n=1 Tax=Branchiostoma floridae RepID=C3ZGQ2_BRAFL Length = 595 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 174/576 (30%), Positives = 286/576 (49%), Gaps = 71/576 (12%) Query: 420 NLKYDRGILAN-YGIELRGIAFDTMLESYILNSVAGRHDMDSLAE-RWLKHKTITFEEIA 477 +LK LA I + G D + ++L+ A D + + ++ ++ + + Sbjct: 16 DLKAQYKALAAGCDITMNGNFQDPKVADWLLDPDAKVKRFDEMVKGQFTPQESDLLQGLR 75 Query: 478 GK-GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPV 536 G+ L+ AA + T L +K+ L + +G F N+EMP + Sbjct: 76 ECFGEGSLSMTVQNAGSGQTRAALECVFTFHLMVKL-SKLLEEQGLSTAFRNVEMPSLVA 134 Query: 537 LSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG- 595 L+R+E NG +P+ + + RL LE++AH++AG F L+STK + +L+E++ Sbjct: 135 LARLELNGAGFNPEECETQCQVMKDRLRMLEERAHKLAGHTFALNSTKAVDKVLYEEKKL 194 Query: 596 ----IKPLKKTPGGAPSTSEE-VLEELALDYPL---PKVILEYRGLAKLKSTYTDKLPLM 647 P STS + VLE+L +PL P VIL+++ ++ L + T Sbjct: 195 EINEDPSTNSQPQERLSTSRKGVLEKLKTSHPLHPLPGVILKWKHISNLLNKVTPLQKKN 254 Query: 648 I-NPK--TGRVHTSYHQAVTATGRLSSTDPNLQNIPVR---------------------- 682 + NP+ R++++ + TATGR++ DPNLQ IP Sbjct: 255 VYNPRLNMDRIYSTCN-LHTATGRVAFHDPNLQFIPKEFEIEMPTDTNNEDGPPAAGEET 313 Query: 683 -NEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEV 741 ++ +R AFI + VI++ADYSQ+E+RIMAHLS+D L A G+D+ +A A++ Sbjct: 314 MSKRKVCMRHAFIPFKGGVILAADYSQLEVRIMAHLSKDSKLTQALNSGQDVFKAIASQW 373 Query: 742 FGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEY 801 G+ +E V+ + R+ AK + +G+IYGM L +L + ++E ++ ++ + Y G+ Y Sbjct: 374 KGVAVEHVSDKLRQQAKQLYYGIIYGMGPKTLGEKLGVSKEEGKRRIETFKSSYTGIQRY 433 Query: 802 MERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMI 861 + T Q K GYV+T+ RR YLPDI + + + AER A N +QG+AAD++K+AM+ Sbjct: 434 RQTTVDQCKRNGYVQTMAERRRYLPDINGEDYYKLSQAERQAFNTTIQGSAADLVKKAMV 493 Query: 862 AVDAWLQAEQPRVR-------------------------------MIMQVHDELVFEVHK 890 +D LQ E P R +I+Q+HDEL++EVH+ Sbjct: 494 LIDQRLQQEFPDTRRSHRHGESTAAAADTDKRRSQQPSSPPRGAYLILQLHDELIYEVHE 553 Query: 891 DDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 +D VA+ + ME L V L V+V G W Q Sbjct: 554 EDEQKVAQIVKHKMEKAMELSVELPVKVKVGPTWGQ 589 >UniRef50_Q299V6 GA19301 n=2 Tax=pseudoobscura subgroup RepID=Q299V6_DROPS Length = 2054 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 163/587 (27%), Positives = 278/587 (47%), Gaps = 55/587 (9%) Query: 368 LVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGI 427 + GLSF + V Y+ + + Q+ ++ L L++ + + + K Sbjct: 1493 IAGLSFCLADNVVYYMCMQEE---EGQQVPTRLKVQELCKLMDRPELTLLVHDAKEQLKA 1549 Query: 428 L-------ANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG 480 L N GI + D + +++L ++ +++ T + G G Sbjct: 1550 LLHGVPQLHNIGIRVE----DPKVGNWLLEPEKT-FSFKNMCQQFAPECT-ALANLCGSG 1603 Query: 481 KNQLT--FNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLS 538 + + + + A+ +A VT+ + +L++ + +EMP+ VL Sbjct: 1604 RGYSSHGLDSSSAILPKLRASIEACVTVHILKGQIENLERIE--------VEMPIQIVLC 1655 Query: 539 RIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKP 598 R+E G + + + + L ++E K +++ G +FNL ST+ + +L Sbjct: 1656 RMECVGFPAKHQRMGRLIKHMLDTLNKVEIKIYKMHGSKFNLGSTQAVANVL-------G 1708 Query: 599 LKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTS 658 L + P G STS +VLE+L P+ ++IL +R L PL+ K R+H Sbjct: 1709 LHRKPHGRVSTSRQVLEKLGS--PISELILNHRKLNM--QIVKGMQPLIRCCKANRIHGH 1764 Query: 659 YHQAVTATGRLSSTDPNLQNIPVR-------NEEGRRIRQAFIA-PEDYVIVSADYSQIE 710 TATGR+S ++PNLQN+ + R F + E ++SAD+ Q+E Sbjct: 1765 -SITHTATGRISMSEPNLQNVAKDFDIRMGPDSVRISCRSVFKSMDEKRCLLSADFCQLE 1823 Query: 711 LRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSA 770 +RI+AHLS+DK L++ +D+ A AA +P VT + R K I +G++YGM Sbjct: 1824 MRILAHLSQDKALVSVMNSPQDLFTAIAAHWNHIPEAEVTEQMRSGTKQICYGIVYGMGM 1883 Query: 771 FGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKS 830 L L EAQ + + + YPG+ Y E+ A++ GYVET+ GRR YL I S Sbjct: 1884 RSLGDALQCTESEAQLICEQFHQSYPGIRAYTEKVLKFARKLGYVETITGRRRYLDHINS 1943 Query: 831 SNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQA-------EQPRVRMIMQVHDE 883 AER A+N +QG+AADI KRA++ +D + E+ +++++ +HDE Sbjct: 1944 GEQNLIKQAERQAVNTTIQGSAADIAKRAILDMDKNIGRYWKKLGVEENSIQLVLHIHDE 2003 Query: 884 LVFEVHKDDVDAVAKQIHQLMENC--TRLDVPLLVEVGSGENWDQAH 928 LV+EV + +AK + ME+ +L VPL V++ GE+W + H Sbjct: 2004 LVYEVPEAKAKRIAKFLGLTMESIGKGKLTVPLKVKIKMGESWGEMH 2050 >UniRef50_UPI000180C99B PREDICTED: similar to DNA polymerase theta n=1 Tax=Ciona intestinalis RepID=UPI000180C99B Length = 1711 Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 170/627 (27%), Positives = 289/627 (46%), Gaps = 56/627 (8%) Query: 334 LDEETLKAWIAKLEKAPVFAFDTET-DSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDA 392 +D E L + FAF LVGLS P V Y+ + Sbjct: 1096 IDHEKLSDFFHIWANETKFAFSVNVQTCTSEKDPKLVGLSLCWSPTVVYYLDIQILKTRH 1155 Query: 393 PDQISRERALELLKPLLE--DEKALKVGQNLKYDRGILAN---YGIELRGIAFDTMLESY 447 P +E ++ + E DE +++ +K + N +G+ D M+ S+ Sbjct: 1156 PS------VIEDIQNIFESFDEDVIQIAFCIKDQFKWMLNSGVHGVTTSNNWQDPMIASW 1209 Query: 448 ILNSVAGRHDMDSLAERWLKHKTITFEEI-AGKGKNQLTFNQIALEEAGRYAAEDADVTL 506 +++ + + SL E + F++ N+ ++ ++ E + ++ + Sbjct: 1210 LMDPDNIKQGLFSLVEHYCSEHLYLFQDTKYDWDVNRPSYTSVSSE---KVCCVESIASY 1266 Query: 507 QLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAEL 566 L L++ L F +EMP + ++ +E NG+++D +L + EL L Sbjct: 1267 ILMLQLEEQLSGM-NMWQHFTGVEMPHMYCVALLELNGIEVDNSLLKRYRLELHSASLAL 1325 Query: 567 EKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKV 626 ++KA +I G +FNLS+ K++ +LF++ + YP Sbjct: 1326 QEKAWKILGRKFNLSNPKEVSKVLFQELRLXXXXXXXXXXXX-------XXXXXYP---C 1375 Query: 627 ILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVR---- 682 I+ +R + + L + P GR+H +T TGR+ ++PN+Q+IP + Sbjct: 1376 IMSWRTVNYALNKVI-LLINSLPPSCGRLHHKCL-TLTNTGRMIMSEPNIQSIPKQFSIT 1433 Query: 683 --------NEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAE-GKDI 733 +E+ +R F+A +++SADYSQIELRI+AHLS D+ L+ AF G DI Sbjct: 1434 KGSKSEADSEQSFCLRNIFVAGNGKLLISADYSQIELRILAHLSGDETLIAAFNSSGVDI 1493 Query: 734 HRATAAEVFGL--PLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLY 791 ++ AA + ++ VT +QR + K +G++YGM A LA+Q+N +AQ MD + Sbjct: 1494 FKSIAAMFYSEISSIDDVTDKQRDTTKQTCYGILYGMGAQTLAQQMNTSETDAQNAMDSF 1553 Query: 792 FERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGT 851 YP V Y R AQ KE+GY+ET+ GRR YLP+IKS R+ AER A+N+ +QG+ Sbjct: 1554 MNSYPMVKVYFNRLVAQCKEKGYIETISGRRRYLPEIKSVRLKMRSHAERQAVNSTIQGS 1613 Query: 852 AADIIKRAMIAVDAWLQAEQPR------------VRMIMQVHDELVFEVHKDDVDAVAKQ 899 AADI+K A + + + ++ +HDEL++EV + + Sbjct: 1614 AADIVKMATYKIHCAVASLGWNTLHQNTRSNTTDFFLVHHIHDELIYEVDEKKLHEAVSV 1673 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWDQ 926 I + M + + V L V + G+ W Sbjct: 1674 IERCMVDAFPMSVKLAVRIKVGKLWGD 1700 >UniRef50_B3M1V8 GF17871 n=1 Tax=Drosophila ananassae RepID=B3M1V8_DROAN Length = 2135 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 165/575 (28%), Positives = 276/575 (48%), Gaps = 38/575 (6%) Query: 371 LSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILAN 430 LSF ++ Y+ + +S L+ + + V K ++ Sbjct: 1572 LSFCVDSH---YVVHFKMQEEKGRGVSTSLKLQEISKIFARTDLTLVMHKTKDQLKVILQ 1628 Query: 431 YGIELRGIAF---DTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFN 487 EL+ IA D + S+++ ++ +++ + + + G G ++ Sbjct: 1629 AIPELKTIAVKFEDPNVASWLMQPDRN-CSFQNMCQQYAP-ECLNLLNLCGSGLGYTSYG 1686 Query: 488 QIALEEAGRYAAEDADVTLQLHLK--MWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGV 545 A E + + +H+ L++H+ + VF + EMPL +L+++E G Sbjct: 1687 LDASSEVSAQVRAQVEACVSVHILNGQMKSLEEHQ-FIKVFRDNEMPLCLILAQMEVIGF 1745 Query: 546 KIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGG 605 + L N ++ + +LE K E+ G FN++S++ + +L + + P G Sbjct: 1746 PVKEHRLGNLISQIAGSMKKLEAKIFELNGSRFNINSSQAVAKVL-------GIHRKPTG 1798 Query: 606 APSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTA 665 STS EVLE L + P+ +I +YR L L PLM R+H TA Sbjct: 1799 RVSTSREVLERL--EAPIANLICQYRKLNALLVKNVQ--PLMKCCLNNRIHGH-SITNTA 1853 Query: 666 TGRLSSTDPNLQNIPVRN-----EEGR--RIRQAFIA-PEDYVIVSADYSQIELRIMAHL 717 TGR+S +PNLQN+ + G R AF+ ++SAD+ Q+E+RI+AHL Sbjct: 1854 TGRISMAEPNLQNVAKNFVVDVQDRGAIVSCRSAFMPMDSTRCLLSADFCQLEMRILAHL 1913 Query: 718 SRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQL 777 S+DK L+ A +DI + +A + V+ + R K I +G+IYGMS LA +L Sbjct: 1914 SQDKALVAAMNSPRDIFTSISAHWHRMNESEVSDQLREGTKKICYGIIYGMSMRKLADEL 1973 Query: 778 NIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRA 837 N+ +EA+ + + YPG+ Y R A+ +GYVET+ GRR YL +I+S + R Sbjct: 1974 NVTEQEAEVLSEQFHSNYPGIRSYTNRLIKYARHKGYVETITGRRRYLENIRSEDAGTRK 2033 Query: 838 AAERAAINAPMQGTAADIIKRAMIAVDAWLQA-------EQPRVRMIMQVHDELVFEVHK 890 AER A+N+ +QG+AADI K A+I +++ ++ V +++ +HDEL+FEV Sbjct: 2034 KAERQAVNSTIQGSAADIAKVAIIKSVKYMRRHCQKLFIDENSVNLVLHIHDELMFEVPA 2093 Query: 891 DDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWD 925 D +AK + +ME RL VPL V++ G W Sbjct: 2094 DKAKKIAKLLKVVMEASARLTVPLKVKLKMGSCWG 2128 >UniRef50_D0MZ95 DNA polymerase I, putative n=2 Tax=Phytophthora infestans T30-4 RepID=D0MZ95_PHYIN Length = 1054 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 201/742 (27%), Positives = 312/742 (42%), Gaps = 151/742 (20%) Query: 332 TILDEETLKAWIAKLEKAPV---FAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHD 388 I DEE + + KLE+ A DTE +D + VG ++ Y D Sbjct: 317 LIQDEEGARRVLQKLEELGPNHFHACDTEVAQIDVKAVGPVGNGVVTC--LSLYSGPDVD 374 Query: 389 YLDAP-----DQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTM 443 Y + P + S E L+L K LE + LKV N +DR +L N+GI ++G+ DTM Sbjct: 375 YGNGPYVWVDNLDSAEGTLQLFKEFLESKNYLKVWHNYSFDRHVLFNHGINVQGLGGDTM 434 Query: 444 LESYILNSVA---GRHDMDSLAERWLKHKTITFEEIAG---------KGKNQLTFNQIAL 491 + + N+ G + ++SL L + +E+ G KGK ++ L Sbjct: 435 HMARLWNTARFQNGGYSLESLTADLLLQRKKPMKELFGIPKLKKDGSKGKERIMPTVEEL 494 Query: 492 -------EEAGRYAAEDADVTLQLHLKMWPDLQKHKG-------------PLNVFENIEM 531 + RY+ DA+ T LH + L + + + Sbjct: 495 QRFPEFRKRWIRYSVYDAESTWFLHRVLQDKLDQTFWFEKPNGGESQVGSMYEFYREYIV 554 Query: 532 PLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAG------EEFNLSSTKQ 585 P L+ IER G+ +D + L ++ A LEK + A E NL S Q Sbjct: 555 PFGECLTDIERRGMHVDLEYLAGVEKQALEDRARLEKLVLQWASRYCEESERINLYSAAQ 614 Query: 586 LQTILF-------------------------------------------EKQGIKPLKKT 602 Q +LF GI P T Sbjct: 615 KQQLLFAPYFNKKKKEQVLPAERSFEVENTEGFIEEGKQKAKKKRNITIRGLGIPPTHFT 674 Query: 603 PGGAPSTSEEVLEELALDYPLP-------------------------KVILEYRGLAKLK 637 G P+ S EVL++LA +P K + + + + Sbjct: 675 ASGLPAASAEVLKDLAG-HPEANPPQYGRAYGHFEDKEEGAAACVALKALFDISSINTML 733 Query: 638 STYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE 697 + + L + + + RVH S + T TGRLSS PNLQN P ++ +IR AF AP Sbjct: 734 NNFILPLQELADSNS-RVHCSLN-LNTDTGRLSSRKPNLQNQPAMGKDRYKIRDAFTAPP 791 Query: 698 DYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETV-------- 749 ++ ADYSQ+ELR+MAH+++ K ++ AF G D H TA ++ + V Sbjct: 792 GKKLIVADYSQLELRLMAHITQCKAMIEAFKAGGDFHSRTAMGMYPYVAKAVENGEALLE 851 Query: 750 -----------------TSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYF 792 ++R++AK +NF + YG +AFGLA+ N+ RKEA ++ ++ Sbjct: 852 WDHTTGKEPPAPLLKDKYGDERKNAKVLNFSIAYGKTAFGLAKDFNVSRKEAADTLEKWY 911 Query: 793 ERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDI-----KSSNGARRAAAERAAINAP 847 V ++ ++ A+ GY TL GR LPD ++ R AERAAIN P Sbjct: 912 SDRGEVRDWQKKAIETARTFGYTRTLLGRYRRLPDAMLRDDSMTSKKARGHAERAAINTP 971 Query: 848 MQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENC 907 +QG AAD++ +AM+ V + + M+ Q+HDE++ E ++ VD K + LMEN Sbjct: 972 IQGAAADVVMQAMLQVHHSPRLRELGWGMVSQIHDEIIVEGPEESVDEAMKLVVHLMENP 1031 Query: 908 TR--LDVPLLVEVGSGENWDQA 927 + L V L V+ ++W +A Sbjct: 1032 FQKPLSVALEVDANVDDSWFKA 1053 >UniRef50_B3LAQ1 POM1 homolog, putative n=1 Tax=Plasmodium knowlesi strain H RepID=B3LAQ1_PLAKH Length = 1861 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 179/689 (25%), Positives = 315/689 (45%), Gaps = 58/689 (8%) Query: 256 VELELTCEQLEVQQPAAEELLGLFKKYEFKRWTAD--VEAGKWLQAKGAKPAAKPQETSV 313 V + L ++ +EE+ ++ + KR+ D + + + + V Sbjct: 1209 VSHPGKEDALSGEKQYSEEIKSIYGEEVTKRYIQDNIINVDDNIVKRSGMFKLEGDNKMV 1268 Query: 314 ADEAPEVTATVISYDN-----YVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANL 368 ++E E V +D+ + I D + + D ET L+ + Sbjct: 1269 SNEKLEYYEPVKKFDDDIESRFFLINDNNYNEKINNIYKNVTHCGLDIETTGLEVFDEKI 1328 Query: 369 VGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGIL 428 + A+E Y + +D + I++E L L+ +L++EK +K+ QN K+D L Sbjct: 1329 RLIQIAVEN----YPVIIYDMFN----ITKESILTGLREILKNEKVVKIIQNGKFDAKFL 1380 Query: 429 ANYGIELRGIAFDTMLESYILNSVAGRHD--MDSLAERWLKHKTITFEEIAGKGKNQLTF 486 + ++ I FDT + S +L+ + ++++ E++L + +N + Sbjct: 1381 MHNNFQVDNI-FDTYIASKLLDKNKNMYGFKLNNIVEKYLNVTLDK------QQQNSVWN 1433 Query: 487 NQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVK 546 N + YAA D+ L+L+ K+ ++ K + +IE + + +E NG+ Sbjct: 1434 NSLLNNNQLFYAARDSSCLLKLYKKLKSEICKEN--METVNDIENKCILPICDMELNGIT 1491 Query: 547 IDPKVLHNHSEELTLRLAELEKKAH-EIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGG 605 +D + L + E+ L K E+ EE N++S +Q+ L Q + Sbjct: 1492 VDLESLKKSTNEILSELNTETSKLKAELKDEEININSQQQVLKAL---QNNNVRDISNKL 1548 Query: 606 APSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTA 665 +TS+ L+ L++ ++ YR L KL S + KLP IN KT ++HT+++Q T Sbjct: 1549 IENTSDSNLKNF-LNHKEVVLLRNYRRLYKLYSAFYLKLPQHINKKTNKIHTTFNQLKTF 1607 Query: 666 TGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLT 725 +GR SS PNLQ IP + + IR+ FI +D + + AD+ QIEL+I A ++ D +L Sbjct: 1608 SGRFSSEKPNLQQIPRQ----KNIREIFIPQKDNIFIIADFKQIELKIAAEITNDDIMLK 1663 Query: 726 AFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLAR------QLNI 779 A+ D+H TA+ + P+ V E R AKAINFGLIYGM+ L LN+ Sbjct: 1664 AYNNNIDLHTLTASIITKKPIADVNKEDRHIAKAINFGLIYGMNYVNLKNYANTYYNLNM 1723 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 + + + +FE Y G+ + + + Q + Y TL R++ P + Sbjct: 1724 NLDQCLYFYNSFFEHYKGIYRWHNQIK-QIRGLEY-STLSNRKVIFP----------YFS 1771 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 A+N P+QGT ADI+K +++ + L+ ++I+ VHDE++ EV K + K Sbjct: 1772 FTKALNYPVQGTCADILKLSLVELYKNLKPIHG--KIILCVHDEIIIEVDKKYQEDALKI 1829 Query: 900 IHQLMENCTRL---DVPLLVEVGSGENWD 925 + + MEN V V V +NW Sbjct: 1830 LVESMENSASFFLKKVKCEVSVKIAQNWG 1858 >UniRef50_A5K1B5 POM1, putative n=1 Tax=Plasmodium vivax RepID=A5K1B5_PLAVI Length = 1860 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 177/674 (26%), Positives = 308/674 (45%), Gaps = 58/674 (8%) Query: 271 AAEELLGLFKKYEFKRWTAD--VEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYD 328 +EE+ L+ + KR+ D + + + + + V E E V +D Sbjct: 1223 YSEEIKSLYGEEVTKRYIQDNIINVDDNIVKRSGTFKLEGDDKMVGSEKLEYYEPVKKFD 1282 Query: 329 N-----YVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYI 383 + + I D + + D ET L+ + + A+E Y Sbjct: 1283 DDIESRFFLIHDSNYNERINHIYKNVTHCGLDIETTGLEVFDEKIRLIQIAVED----YP 1338 Query: 384 PVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTM 443 + +D + I++E L L+ +L++EK +K+ QN K+D L + E+ I FDT Sbjct: 1339 VIIYDMFN----ITKESILTGLREVLKNEKVVKIIQNGKFDAKFLMHNKFEVANI-FDTY 1393 Query: 444 LESYILNSVAGRHD--MDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAED 501 + S +L+ + ++++ E++L + +N + N + YAA D Sbjct: 1394 IASKLLDKNKNMYGFKLNNIVEKYLNVTLDK------QQQNSVWNNSLLNNNQLFYAARD 1447 Query: 502 ADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTL 561 + L+L+ K+ ++ + + +IE + + +E NG+ +D + L + E+ Sbjct: 1448 SSCLLKLYKKLKSEICREN--MGTVNDIENKCILPICDMELNGITVDLESLSKSTNEILS 1505 Query: 562 RLAELEKKAH-EIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALD 620 L E K E+ EE N++S +Q+ L K + +TS+ L+ L+ Sbjct: 1506 ELNEETSKLKAELKDEEINVNSQQQVLKALQNKN---VRDVSNKLIENTSDSNLKNF-LN 1561 Query: 621 YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIP 680 + ++ YR L KL S + KLP IN KT ++HT+++Q T +GR SS PNLQ IP Sbjct: 1562 HREVVLLRNYRRLYKLYSAFYLKLPQHINKKTNKIHTTFNQLKTFSGRFSSEKPNLQQIP 1621 Query: 681 VRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAE 740 + + IR+ FI +D + + AD+ QIEL+I A ++ D +L A+ D+H TA+ Sbjct: 1622 RQ----KNIREIFIPQKDNIFIIADFRQIELKIAAEITNDDIMLKAYNNNIDLHTLTASI 1677 Query: 741 VFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLAR------QLNIPRKEAQKYMDLYFER 794 + + V E R AKAINFGLIYGM+ L LN+ + + + +FE Sbjct: 1678 ITKKAIADVNKEDRHIAKAINFGLIYGMNYVNLKNYANTYYNLNMNLDQCLYFYNSFFEH 1737 Query: 795 YPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAAD 854 Y G+ + + + + Y TL R++ P + A+N P+QGT AD Sbjct: 1738 YKGIYRWHNQIKQM-RALEY-STLSNRKVIFP----------YFSFTKALNYPVQGTCAD 1785 Query: 855 IIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRL---D 911 I+K +++ + L+ ++I+ VHDE++ EV K + K + + MEN Sbjct: 1786 ILKLSLVELYKNLRP--INGKIILCVHDEIIIEVDKKYQEDALKILVESMENSASFFLKK 1843 Query: 912 VPLLVEVGSGENWD 925 V V V +NW Sbjct: 1844 VKCEVSVKIAQNWG 1857 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q9F173 DNA polymerase I n=177 Tax=Proteobacteria RepID=... 1177 0.0 UniRef50_P43741 DNA polymerase I n=222 Tax=cellular organisms Re... 1125 0.0 UniRef50_B9M4P2 DNA polymerase I n=3 Tax=Deltaproteobacteria Rep... 1109 0.0 UniRef50_A1ASW3 DNA polymerase I n=12 Tax=Deltaproteobacteria Re... 1094 0.0 UniRef50_Q65W28 PolA protein n=42 Tax=Bacteria RepID=Q65W28_MANSM 1088 0.0 UniRef50_Q9HT80 DNA polymerase I n=9 Tax=Gammaproteobacteria Rep... 1083 0.0 UniRef50_Q0F0N6 DNA polymerase I n=1 Tax=Mariprofundus ferrooxyd... 1081 0.0 UniRef50_Q6X9Q9 DNA polymerase I n=1 Tax=Spirochaeta thermophila... 1074 0.0 UniRef50_A7HP95 DNA polymerase I n=11 Tax=Alphaproteobacteria Re... 1072 0.0 UniRef50_A0LCQ8 DNA polymerase I n=1 Tax=Magnetococcus sp. MC-1 ... 1072 0.0 UniRef50_B6R626 DNA polymerase I superfamily protein n=1 Tax=Pse... 1051 0.0 UniRef50_B6IUP1 DNA polymerase I, putative n=2 Tax=Alphaproteoba... 1048 0.0 UniRef50_A9ITV6 DNA polymerase I n=89 Tax=Proteobacteria RepID=A... 1047 0.0 UniRef50_B8H5J7 DNA polymerase I n=23 Tax=Alphaproteobacteria Re... 1045 0.0 UniRef50_A9H4T5 DNA polymerase I n=43 Tax=Alphaproteobacteria Re... 1040 0.0 UniRef50_B9KYZ1 DNA polymerase I n=4 Tax=Thermomicrobia (class) ... 1039 0.0 UniRef50_Q21YU4 DNA polymerase I n=39 Tax=Betaproteobacteria Rep... 1036 0.0 UniRef50_A6KZN3 DNA polymerase I n=15 Tax=Bacteroides RepID=A6KZ... 1031 0.0 UniRef50_A0LIP7 DNA polymerase I n=1 Tax=Syntrophobacter fumarox... 1028 0.0 UniRef50_D0XR83 DNA polymerase I n=2 Tax=Alphaproteobacteria Rep... 1025 0.0 UniRef50_Q9S1G2 DNA polymerase I n=25 Tax=Rhizobiales RepID=DPO1... 1021 0.0 UniRef50_Q2LQV1 DNA polymerase I n=1 Tax=Syntrophus aciditrophic... 1018 0.0 UniRef50_Q1QDQ1 DNA polymerase I n=24 Tax=cellular organisms Rep... 1016 0.0 UniRef50_A5EWG4 DNA polymerase I n=10 Tax=Gammaproteobacteria Re... 1014 0.0 UniRef50_B2RLP5 DNA polymerase I n=2 Tax=Porphyromonas gingivali... 1013 0.0 UniRef50_Q1PUU8 Stongly similair to DNA polymerase I n=1 Tax=Can... 1012 0.0 UniRef50_A6TSU6 DNA polymerase I n=13 Tax=Clostridiaceae RepID=A... 1011 0.0 UniRef50_Q1NVM3 DNA polymerase A n=2 Tax=Deltaproteobacteria Rep... 1010 0.0 UniRef50_A5WH47 DNA polymerase I n=4 Tax=Bacteria RepID=A5WH47_P... 1008 0.0 UniRef50_Q6X9S0 DNA polymerase I n=3 Tax=Bacillales RepID=Q6X9S0... 1007 0.0 UniRef50_Q7UI29 DNA polymerase I n=1 Tax=Rhodopirellula baltica ... 1006 0.0 UniRef50_D1R879 Putative uncharacterized protein n=1 Tax=Parachl... 1006 0.0 UniRef50_Q1V0V5 DNA polymerase I n=3 Tax=Candidatus Pelagibacter... 1005 0.0 UniRef50_D2R075 DNA polymerase I n=1 Tax=Pirellula staleyi DSM 6... 1004 0.0 UniRef50_C1ZLA6 DNA polymerase I n=1 Tax=Planctomyces limnophilu... 1003 0.0 UniRef50_B0MYJ0 Putative uncharacterized protein n=1 Tax=Alistip... 1003 0.0 UniRef50_C8PRX0 DNA polymerase I n=1 Tax=Treponema vincentii ATC... 1003 0.0 UniRef50_A6CAX6 DNA polymerase I n=2 Tax=Planctomycetaceae RepID... 1002 0.0 UniRef50_Q2S226 DNA polymerase I n=4 Tax=Rhodothermaceae RepID=Q... 1000 0.0 UniRef50_C8QY72 DNA polymerase I n=1 Tax=Desulfurivibrio alkalip... 998 0.0 UniRef50_Q2GBP7 DNA polymerase I n=10 Tax=Alphaproteobacteria Re... 997 0.0 UniRef50_Q04Q27 DNA-directed DNA polymerase n=4 Tax=Leptospira R... 996 0.0 UniRef50_B0SCM1 DNA-directed DNA polymerase n=2 Tax=Leptospira b... 996 0.0 UniRef50_Q11NX3 DNA polymerase I n=11 Tax=Bacteria RepID=Q11NX3_... 995 0.0 UniRef50_UPI0001744922 DNA polymerase I n=1 Tax=Verrucomicrobium... 994 0.0 UniRef50_O34996 DNA polymerase I n=38 Tax=Bacteria RepID=DPO1_BACSU 992 0.0 UniRef50_D1CFH6 DNA polymerase I n=1 Tax=Thermobaculum terrenum ... 991 0.0 UniRef50_C5CIW2 DNA polymerase I n=1 Tax=Kosmotoga olearia TBF 1... 990 0.0 UniRef50_A4YLA1 DNA polymerase I (POL I) n=63 Tax=cellular organ... 989 0.0 UniRef50_B3TC83 Putative DNA polymerase family A n=1 Tax=uncultu... 985 0.0 UniRef50_Q73M72 DNA polymerase I n=1 Tax=Treponema denticola Rep... 984 0.0 UniRef50_C6W4A8 DNA polymerase I n=44 Tax=Bacteria RepID=C6W4A8_... 983 0.0 UniRef50_B0VJ17 DNA polymerase I n=1 Tax=Candidatus Cloacamonas ... 983 0.0 UniRef50_B8D217 DNA polymerase I n=1 Tax=Halothermothrix orenii ... 982 0.0 UniRef50_C8W0H1 DNA polymerase I n=2 Tax=Clostridia RepID=C8W0H1... 982 0.0 UniRef50_C1A3H5 DNA polymerase I n=1 Tax=Gemmatimonas aurantiaca... 980 0.0 UniRef50_D0RQG2 DNA polymerase I n=1 Tax=alpha proteobacterium H... 979 0.0 UniRef50_C3J9S9 DNA polymerase type I n=2 Tax=Bacteria RepID=C3J... 978 0.0 UniRef50_Q2JPZ4 DNA polymerase I n=3 Tax=Cyanobacteria RepID=Q2J... 978 0.0 UniRef50_Q6MEQ2 Probable DNA polymerase I n=1 Tax=Candidatus Pro... 976 0.0 UniRef50_Q2RHE8 DNA polymerase I n=4 Tax=Clostridia RepID=Q2RHE8... 974 0.0 UniRef50_O08307 DNA polymerase I n=4 Tax=Chloroflexi (class) Rep... 972 0.0 UniRef50_B2UNN5 DNA polymerase I n=1 Tax=Akkermansia muciniphila... 971 0.0 UniRef50_B4S5F3 DNA polymerase I n=12 Tax=Chlorobiaceae RepID=B4... 967 0.0 UniRef50_A7HD60 DNA polymerase I n=2 Tax=Cystobacterineae RepID=... 967 0.0 UniRef50_Q0AVE2 DNA polymerase I n=1 Tax=Syntrophomonas wolfei s... 966 0.0 UniRef50_Q3Z6P9 DNA-directed DNA polymerase I n=5 Tax=Dehalococc... 966 0.0 UniRef50_A9G0B1 DNA polymerase I n=3 Tax=Sorangium cellulosum 'S... 963 0.0 UniRef50_Q04957 DNA polymerase I n=117 Tax=Firmicutes RepID=DPO1... 960 0.0 UniRef50_A7NJD5 DNA polymerase I n=2 Tax=Roseiflexus RepID=A7NJD... 957 0.0 UniRef50_B2IJU1 DNA polymerase I n=25 Tax=cellular organisms Rep... 955 0.0 UniRef50_C9RNE9 DNA polymerase I n=1 Tax=Fibrobacter succinogene... 955 0.0 UniRef50_C0QYF7 DNA polymerase I n=3 Tax=Brachyspira RepID=C0QYF... 955 0.0 UniRef50_B1WPN5 DNA polymerase I n=13 Tax=Bacteria RepID=B1WPN5_... 955 0.0 UniRef50_B0KAJ0 DNA polymerase I n=12 Tax=Thermoanaerobacterales... 954 0.0 UniRef50_B6YQQ9 DNA polymerase I n=13 Tax=Bacteroidales RepID=B6... 951 0.0 UniRef50_A5CXW1 DNA polymerase I n=2 Tax=sulfur-oxidizing symbio... 951 0.0 UniRef50_P74933 DNA polymerase I n=3 Tax=Bacteria RepID=DPO1_TREPA 950 0.0 UniRef50_A7HJZ2 DNA polymerase I n=11 Tax=Bacteria RepID=A7HJZ2_... 950 0.0 UniRef50_Q7VRJ4 DNA polymerase I n=3 Tax=Enterobacteriaceae RepI... 949 0.0 UniRef50_B1GZ14 DNA polymerase I n=1 Tax=uncultured Termite grou... 948 0.0 UniRef50_B0TER6 DNA polymerase i n=2 Tax=Heliobacteriaceae RepID... 947 0.0 UniRef50_A0PZF5 DNA polymerase I n=27 Tax=Clostridia RepID=A0PZF... 947 0.0 UniRef50_Q1D7R1 DNA polymerase I n=4 Tax=Myxococcaceae RepID=Q1D... 946 0.0 UniRef50_B8I3Y7 DNA polymerase I n=6 Tax=Clostridium RepID=B8I3Y... 945 0.0 UniRef50_C7HT94 DNA polymerase I n=1 Tax=Anaerococcus vaginalis ... 945 0.0 UniRef50_D2RIE4 DNA polymerase I n=5 Tax=Clostridiales RepID=D2R... 943 0.0 UniRef50_A9BEU8 DNA polymerase I n=1 Tax=Petrotoga mobilis SJ95 ... 943 0.0 UniRef50_A6NVK8 DNA polymerase I n=2 Tax=Bacteria RepID=A6NVK8_9... 942 0.0 UniRef50_UPI0001C17162 DNA polymerase A n=2 Tax=Nostocaceae RepI... 939 0.0 UniRef50_B9YEU0 DNA polymerase I n=2 Tax=Cyanobacteria RepID=B9Y... 938 0.0 UniRef50_C4Z0G0 DNA polymerase I n=23 Tax=Bacteria RepID=C4Z0G0_... 938 0.0 UniRef50_C6XHK7 DNA polymerase I n=1 Tax=Candidatus Liberibacter... 937 0.0 UniRef50_A6FZM5 DNA polymerase I n=2 Tax=Deltaproteobacteria Rep... 937 0.0 UniRef50_C4Z982 DNA polymerase I n=2 Tax=Clostridiales RepID=C4Z... 935 0.0 UniRef50_C7GEY2 DNA polymerase I n=6 Tax=Clostridiales RepID=C7G... 934 0.0 UniRef50_Q59156 DNA polymerase I n=6 Tax=Clostridia RepID=DPO1_A... 932 0.0 UniRef50_Q02DA6 DNA polymerase I n=1 Tax=Candidatus Solibacter u... 932 0.0 UniRef50_C2MBR8 DNA polymerase type I n=1 Tax=Porphyromonas ueno... 931 0.0 UniRef50_Q55971 DNA polymerase I n=13 Tax=Cyanobacteria RepID=DP... 930 0.0 UniRef50_Q3ABL3 DNA polymerase I n=1 Tax=Carboxydothermus hydrog... 930 0.0 UniRef50_C7RDU0 DNA polymerase I n=3 Tax=Anaerococcus RepID=C7RD... 928 0.0 UniRef50_A8SN89 DNA polymerase I n=2 Tax=Clostridiales Family XI... 928 0.0 UniRef50_A6G5W6 DNA polymerase I n=2 Tax=cellular organisms RepI... 927 0.0 UniRef50_B8FU82 DNA polymerase I n=2 Tax=Desulfitobacterium hafn... 925 0.0 UniRef50_B0S404 DNA polymerase I n=2 Tax=Finegoldia magna RepID=... 923 0.0 UniRef50_D1AZX7 DNA polymerase I n=3 Tax=Campylobacterales RepID... 922 0.0 UniRef50_A1QZY0 DNA polymerase I n=1 Tax=Borrelia turicatae 91E1... 922 0.0 UniRef50_B5RMA2 DNA polymerase I n=2 Tax=Borrelia RepID=B5RMA2_B... 920 0.0 UniRef50_D1VS49 DNA polymerase I n=1 Tax=Peptoniphilus lacrimali... 918 0.0 UniRef50_C4GAN0 Putative uncharacterized protein n=1 Tax=Shuttle... 917 0.0 UniRef50_B1YKA1 DNA polymerase I n=3 Tax=Bacilli RepID=B1YKA1_EXIS2 914 0.0 UniRef50_D1BM52 DNA polymerase I n=6 Tax=Veillonellaceae RepID=D... 914 0.0 UniRef50_C5RBK8 DNA polymerase I n=9 Tax=Lactobacillales RepID=C... 913 0.0 UniRef50_B2TNM6 DNA polymerase I n=7 Tax=Clostridiales RepID=B2T... 911 0.0 UniRef50_O51498 DNA polymerase I n=20 Tax=Borrelia RepID=DPO1_BORBU 906 0.0 UniRef50_Q1JIU7 DNA polymerase I n=14 Tax=Streptococcus RepID=Q1... 904 0.0 UniRef50_B9L837 DNA polymerase I n=2 Tax=Nautiliaceae RepID=B9L8... 902 0.0 UniRef50_C7MNN5 DNA polymerase I n=2 Tax=Coriobacteriaceae RepID... 902 0.0 UniRef50_Q6MPP6 DNA polymerase I n=1 Tax=Bdellovibrio bacteriovo... 902 0.0 UniRef50_Q3AZ16 DNA polymerase A n=12 Tax=Chroococcales RepID=Q3... 901 0.0 UniRef50_D0LQ66 DNA polymerase I n=1 Tax=Haliangium ochraceum DS... 901 0.0 UniRef50_A2C810 DNA polymerase I n=16 Tax=Cyanobacteria RepID=A2... 901 0.0 UniRef50_B4U0B7 DNA polymerase I n=5 Tax=Streptococcus RepID=B4U... 900 0.0 UniRef50_Q30R59 DNA polymerase A n=6 Tax=Epsilonproteobacteria R... 899 0.0 UniRef50_B1C859 DNA polymerase I n=1 Tax=Anaerofustis stercoriho... 899 0.0 UniRef50_C9LLQ0 DNA polymerase I n=1 Tax=Dialister invisus DSM 1... 898 0.0 UniRef50_Q7WZP8 DNA polymerase type I n=2 Tax=unclassified Bacte... 896 0.0 UniRef50_C5B5N3 DNA polymerase I n=1 Tax=Methylobacterium extorq... 896 0.0 UniRef50_P52028 DNA polymerase I, thermostable n=18 Tax=Bacteria... 896 0.0 UniRef50_Q04G12 DNA polymerase I n=28 Tax=Lactobacillales RepID=... 894 0.0 UniRef50_P59200 DNA polymerase I n=187 Tax=Firmicutes RepID=DPO1... 893 0.0 UniRef50_B9Y7P1 DNA polymerase I n=2 Tax=Erysipelotrichaceae Rep... 893 0.0 UniRef50_C8PHS8 DNA polymerase I n=2 Tax=Campylobacter RepID=C8P... 893 0.0 UniRef50_UPI0001978038 DNA polymerase I n=1 Tax=Helicobacter cin... 893 0.0 UniRef50_C1A095 DNA polymerase I n=60 Tax=Actinomycetales RepID=... 891 0.0 UniRef50_B1BYY4 DNA polymerase I n=4 Tax=Bacteria RepID=B1BYY4_9... 891 0.0 UniRef50_C4LIB4 DNA polymerase I n=1 Tax=Corynebacterium kroppen... 890 0.0 UniRef50_B0MR22 DNA polymerase I n=1 Tax=Eubacterium siraeum DSM... 886 0.0 UniRef50_Q1II21 DNA polymerase I n=2 Tax=Acidobacteria RepID=Q1I... 885 0.0 UniRef50_Q2JCJ5 DNA polymerase I n=10 Tax=Actinomycetales RepID=... 884 0.0 UniRef50_B6G9J6 Putative uncharacterized protein n=2 Tax=Collins... 884 0.0 UniRef50_D0WFK8 DNA polymerase I n=2 Tax=Coriobacteriaceae RepID... 883 0.0 UniRef50_D0L9T3 DNA polymerase I n=2 Tax=Corynebacterineae RepID... 882 0.0 UniRef50_A8R8A1 DNA polymerase I n=2 Tax=unclassified Erysipelot... 881 0.0 UniRef50_B0PCZ2 DNA polymerase I n=3 Tax=Clostridiales RepID=B0P... 881 0.0 UniRef50_B5YDJ0 DNA polymerase I n=3 Tax=Dictyoglomus RepID=B5YD... 879 0.0 UniRef50_P46835 DNA polymerase I n=51 Tax=Actinobacteridae RepID... 874 0.0 UniRef50_C2D755 DNA-directed DNA polymerase n=1 Tax=Atopobium va... 874 0.0 UniRef50_Q118S8 DNA polymerase I n=4 Tax=Cyanobacteria RepID=Q11... 872 0.0 UniRef50_A8FKC7 DNA polymerase I n=20 Tax=Campylobacter RepID=A8... 871 0.0 UniRef50_C8W7U1 DNA polymerase I n=3 Tax=Coriobacteriaceae RepID... 870 0.0 UniRef50_Q9RAA9 DNA polymerase I n=2 Tax=spotted fever group Rep... 869 0.0 UniRef50_B5YG86 DNA polymerase I n=1 Tax=Thermodesulfovibrio yel... 868 0.0 UniRef50_A9NF42 DNA polymerase I n=1 Tax=Acholeplasma laidlawii ... 868 0.0 UniRef50_B2A646 DNA polymerase I n=1 Tax=Natranaerobius thermoph... 867 0.0 UniRef50_Q5HCC8 DNA polymerase I n=14 Tax=Rickettsiales RepID=Q5... 866 0.0 UniRef50_UPI0001976BF8 DNA polymerase I n=1 Tax=Bifidobacterium ... 865 0.0 UniRef50_A0JWM3 DNA polymerase I n=7 Tax=Actinobacteria (class) ... 864 0.0 UniRef50_Q4JW27 DNA polymerase I n=2 Tax=Corynebacterium jeikeiu... 864 0.0 UniRef50_Q7VGK4 DNA polymerase I n=8 Tax=Campylobacterales RepID... 864 0.0 UniRef50_Q1RH76 DNA polymerase I n=18 Tax=Rickettsia RepID=DPO1_... 863 0.0 UniRef50_B8DUU4 DNA polymerase I n=16 Tax=Bifidobacterium RepID=... 860 0.0 UniRef50_UPI00016BFC66 DNA polymerase I n=1 Tax=Epulopiscium sp.... 859 0.0 UniRef50_B6WQX5 Putative uncharacterized protein n=1 Tax=Desulfo... 858 0.0 UniRef50_A9KNZ3 DNA polymerase I n=4 Tax=Firmicutes RepID=A9KNZ3... 858 0.0 UniRef50_C0E901 Putative uncharacterized protein (Fragment) n=2 ... 854 0.0 UniRef50_C5CBM1 DNA polymerase I n=2 Tax=Micrococcus luteus NCTC... 854 0.0 UniRef50_UPI0001C32326 DNA polymerase I n=1 Tax=Conexibacter woe... 851 0.0 UniRef50_A5CDT3 DNA polymerase I n=2 Tax=Orientia tsutsugamushi ... 848 0.0 UniRef50_C6C0R6 DNA polymerase I n=3 Tax=Desulfovibrio RepID=C6C... 848 0.0 UniRef50_D2VA69 DNA polymerase I n=1 Tax=Naegleria gruberi RepID... 845 0.0 UniRef50_Q14QK7 DNA polymerase I n=1 Tax=Spiroplasma citri RepID... 845 0.0 UniRef50_Q252Y8 DNA polymerase I n=14 Tax=Chlamydiaceae RepID=Q2... 845 0.0 UniRef50_C7H3Z2 DNA polymerase I n=2 Tax=Ruminococcaceae RepID=C... 844 0.0 UniRef50_C4FFL7 Putative uncharacterized protein n=2 Tax=Bifidob... 841 0.0 UniRef50_B8IZN9 DNA polymerase I n=1 Tax=Desulfovibrio desulfuri... 838 0.0 UniRef50_Q30VQ3 DNA polymerase I n=7 Tax=Desulfovibrionales RepI... 836 0.0 UniRef50_P52027 DNA polymerase I n=4 Tax=Deinococci RepID=DPO1_D... 836 0.0 UniRef50_Q2GI23 DNA polymerase I n=6 Tax=Rickettsiales RepID=Q2G... 834 0.0 UniRef50_A5TW64 DNA-directed DNA polymerase I n=10 Tax=Fusobacte... 833 0.0 UniRef50_C2BWF0 DNA-directed DNA polymerase n=1 Tax=Mobiluncus c... 832 0.0 UniRef50_UPI0001BC5C75 DNA polymerase I n=3 Tax=Fusobacterium Re... 827 0.0 UniRef50_C3WHF0 DNA polymerase I n=3 Tax=Fusobacterium RepID=C3W... 824 0.0 UniRef50_D1AJI6 DNA polymerase I n=2 Tax=Fusobacteriaceae RepID=... 824 0.0 UniRef50_B2GGW1 DNA polymerase I n=1 Tax=Kocuria rhizophila DC22... 813 0.0 UniRef50_B2KCD2 DNA polymerase I n=1 Tax=Elusimicrobium minutum ... 813 0.0 UniRef50_C7GZ50 DNA polymerase I n=1 Tax=Eubacterium saphenum AT... 812 0.0 UniRef50_A3EQ00 DNA polymerase I n=3 Tax=Leptospirillum RepID=A3... 811 0.0 UniRef50_D1Y4U0 DNA polymerase I n=1 Tax=Pyramidobacter piscolen... 803 0.0 UniRef50_D2RAL7 DNA-directed DNA polymerase n=2 Tax=Gardnerella ... 802 0.0 UniRef50_C7LZ56 DNA polymerase I n=1 Tax=Acidimicrobium ferrooxi... 800 0.0 UniRef50_C8NZ98 DNA polymerase I n=1 Tax=Erysipelothrix rhusiopa... 797 0.0 UniRef50_C1TPP4 DNA polymerase I n=2 Tax=Synergistaceae RepID=C1... 794 0.0 UniRef50_D2NTK8 DNA polymerase I n=2 Tax=Rothia mucilaginosa Rep... 782 0.0 UniRef50_Q2SRK9 DNA polymerase I n=4 Tax=Mollicutes RepID=Q2SRK9... 780 0.0 UniRef50_D1B5M0 DNA polymerase I n=1 Tax=Thermanaerovibrio acida... 754 0.0 UniRef50_Q2GD93 DNA polymerase I n=2 Tax=Neorickettsia RepID=Q2G... 753 0.0 UniRef50_D1AV04 DNA polymerase I n=1 Tax=Streptobacillus monilif... 745 0.0 UniRef50_Q1AUF6 DNA polymerase I n=1 Tax=Rubrobacter xylanophilu... 743 0.0 UniRef50_UPI00016C3887 DNA polymerase I n=1 Tax=Gemmata obscurig... 733 0.0 UniRef50_Q8I7W9 Mitochondrial DNA polymerase A n=2 Tax=Eukaryota... 719 0.0 UniRef50_C7N982 DNA polymerase I n=6 Tax=Leptotrichia RepID=C7N9... 716 0.0 UniRef50_Q9ZJE9 DNA polymerase I n=17 Tax=Helicobacter RepID=DPO... 706 0.0 UniRef50_Q057H2 5'-3' exonuclease domain of DNA polymerase I n=2... 684 0.0 UniRef50_A6DML3 DNA-directed DNA polymerase, DNA polimerase I pr... 684 0.0 UniRef50_D2QFD0 DNA polymerase I n=3 Tax=Bacteria RepID=D2QFD0_9... 679 0.0 UniRef50_C1SHV2 DNA polymerase I n=1 Tax=Denitrovibrio acetiphil... 662 0.0 UniRef50_D1PTJ0 DNA-directed DNA polymerase I (Fragment) n=1 Tax... 647 0.0 UniRef50_C1XI40 DNA polymerase I n=24 Tax=Bacteria RepID=C1XI40_... 621 e-176 UniRef50_C3XEZ4 DNA polymerase I n=3 Tax=Bacteria RepID=C3XEZ4_9... 571 e-161 UniRef50_C0X9C2 Possible DNA polymerase I (Fragment) n=3 Tax=Fir... 549 e-154 UniRef50_Q72ES3 DNA polymerase I n=3 Tax=Desulfovibrio vulgaris ... 541 e-152 UniRef50_A5D075 DNA polymerase I-3'-5' exonuclease and polymeras... 528 e-148 UniRef50_D0YSZ1 DNA polymerase I n=6 Tax=Actinobacteridae RepID=... 527 e-148 UniRef50_C8VXR3 DNA-directed DNA polymerase n=1 Tax=Desulfotomac... 499 e-139 UniRef50_B3RWI3 Putative uncharacterized protein (Fragment) n=1 ... 491 e-137 UniRef50_Q4UGW4 DNA polymerase i, putative n=2 Tax=Theileria Rep... 487 e-136 UniRef50_C3U0N1 Truncated DNA polymerase I n=1 Tax=uncultured ba... 485 e-135 UniRef50_B4KC49 GI21961 n=1 Tax=Drosophila mojavensis RepID=B4KC... 478 e-133 UniRef50_Q7TQ07 DNA polymerase nu n=13 Tax=Tetrapoda RepID=DPOLN... 477 e-133 UniRef50_B4MBB7 GJ14321 n=1 Tax=Drosophila virilis RepID=B4MBB7_... 476 e-132 UniRef50_B4NI17 GK13557 n=1 Tax=Drosophila willistoni RepID=B4NI... 472 e-131 UniRef50_C3U0N4 DNA polymerase I n=1 Tax=uncultured bacterium Re... 472 e-131 UniRef50_Q7TQC0 DNA polymerase Q n=13 Tax=Deuterostomia RepID=Q7... 471 e-131 UniRef50_B0TCV6 DNA polymerase i n=1 Tax=Heliobacterium modestic... 470 e-131 UniRef50_Q7Z5Q5 DNA polymerase nu n=15 Tax=Amniota RepID=DPOLN_H... 470 e-130 UniRef50_C3YL74 Putative uncharacterized protein (Fragment) n=1 ... 469 e-130 UniRef50_A3DFZ4 DNA-directed DNA polymerase n=3 Tax=Clostridium ... 469 e-130 UniRef50_Q588V7 Helicase and polymerase containing protein TEBIC... 464 e-129 UniRef50_O18475 FI03732p n=5 Tax=melanogaster subgroup RepID=O18... 464 e-128 UniRef50_A7AQX3 DNA polymerase I, putative n=1 Tax=Babesia bovis... 462 e-128 UniRef50_A9U2H4 Predicted protein n=1 Tax=Physcomitrella patens ... 459 e-127 UniRef50_Q1ARA6 DNA polymerase I n=1 Tax=Rubrobacter xylanophilu... 457 e-127 UniRef50_O75417 DNA polymerase theta n=30 Tax=Deuterostomia RepI... 457 e-126 UniRef50_B4AHF3 DNA polymerase I n=1 Tax=Bacillus pumilus ATCC 7... 456 e-126 UniRef50_UPI000180C99B PREDICTED: similar to DNA polymerase thet... 454 e-126 UniRef50_UPI0000D572BA PREDICTED: similar to DNA polymerase thet... 454 e-126 UniRef50_Q299V6 GA19301 n=2 Tax=pseudoobscura subgroup RepID=Q29... 454 e-126 UniRef50_P30314 DNA polymerase n=4 Tax=Caudovirales RepID=DPOL_B... 450 e-125 UniRef50_B3M1V8 GF17871 n=1 Tax=Drosophila ananassae RepID=B3M1V... 445 e-123 UniRef50_Q2QTK2 DNA polymerase I family protein, expressed n=4 T... 444 e-123 UniRef50_D0MZ95 DNA polymerase I, putative n=2 Tax=Phytophthora ... 443 e-122 UniRef50_A5X572 DNA polymerase nu n=8 Tax=Euteleostomi RepID=A5X... 443 e-122 UniRef50_C3ZGQ2 DNA polymerase I n=1 Tax=Branchiostoma floridae ... 443 e-122 UniRef50_Q4RK95 Chromosome 18 SCAF15030, whole genome shotgun se... 442 e-122 UniRef50_Q2NK60 DNA polymerase I n=5 Tax=Candidatus Phytoplasma ... 442 e-122 UniRef50_C4Z601 DNA polymerase I n=1 Tax=Eubacterium eligens ATC... 442 e-122 UniRef50_B8FYE5 DNA-directed DNA polymerase n=2 Tax=Desulfitobac... 438 e-121 UniRef50_UPI0001C360F5 hypothetical protein ChatD1_13164 n=1 Tax... 436 e-120 Sequences not found previously or not previously below threshold: >UniRef50_Q9F173 DNA polymerase I n=177 Tax=Proteobacteria RepID=DPO1_SALTY Length = 928 Score = 1177 bits (3046), Expect = 0.0, Method: Composition-based stats. Identities = 871/928 (93%), Positives = 906/928 (97%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 MVQIP+NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQY+PTHAAV Sbjct: 1 MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYQPTHAAV 60 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT Sbjct: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL 180 LAREAEK GRPVLISTGDKDMAQLVTPNITLINTMTNTILGP+EVVNKYGVPPELIIDFL Sbjct: 121 LAREAEKVGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPDEVVNKYGVPPELIIDFL 180 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGL+FRGAKTMA KL QNK Sbjct: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLTFRGAKTMAGKLAQNK 240 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 +VAYLSY+LATIKTDVELELTCEQLEVQQP A+ELLGLFKKYEFKRWTADVE+GKWLQAK Sbjct: 241 DVAYLSYKLATIKTDVELELTCEQLEVQQPIADELLGLFKKYEFKRWTADVESGKWLQAK 300 Query: 301 GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDS 360 GAKPAAKPQET V DE+P A +SY+NYVTILD+ TL++WI KL+KAPVFAFDTETDS Sbjct: 301 GAKPAAKPQETVVIDESPSEPAAALSYENYVTILDDVTLESWIEKLKKAPVFAFDTETDS 360 Query: 361 LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN 420 LDNI+ANLVGLSFAIEPGVAAY+PVAHDYLDAPDQISR+RALELLKPLLEDEK KVGQN Sbjct: 361 LDNIAANLVGLSFAIEPGVAAYVPVAHDYLDAPDQISRQRALELLKPLLEDEKVRKVGQN 420 Query: 421 LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG 480 LKYDRG+L NYGIELRGIAFDTMLESYILNSVAGRHDMDSL++RWLKHKTITFE+IAGKG Sbjct: 421 LKYDRGVLQNYGIELRGIAFDTMLESYILNSVAGRHDMDSLSDRWLKHKTITFEDIAGKG 480 Query: 481 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI 540 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWP+LQ+HKGPLNVFENIEMPLVPVLSR+ Sbjct: 481 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPELQQHKGPLNVFENIEMPLVPVLSRV 540 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK 600 ERNGVKIDP VLH HSEE+TLRLAELEKKAH+IAGE FNLSSTKQLQTILFEKQGIKPLK Sbjct: 541 ERNGVKIDPAVLHKHSEEITLRLAELEKKAHDIAGEAFNLSSTKQLQTILFEKQGIKPLK 600 Query: 601 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH Sbjct: 601 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRD 720 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY+IVSADYSQIELRIMAHLSRD Sbjct: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYLIVSADYSQIELRIMAHLSRD 720 Query: 721 KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 KGLLTAFAEGKDIHRATAAEVFGLPL++VT EQRRSAKAINFGLIYGMSAFGL+RQLNIP Sbjct: 721 KGLLTAFAEGKDIHRATAAEVFGLPLDSVTGEQRRSAKAINFGLIYGMSAFGLSRQLNIP 780 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETL+GRRLYLPDIKSSN ARRA AE Sbjct: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLEGRRLYLPDIKSSNAARRAGAE 840 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDD+DAVAK+I Sbjct: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDLDAVAKRI 900 Query: 901 HQLMENCTRLDVPLLVEVGSGENWDQAH 928 HQLMENCTR+DVPLLVEVGSGENWDQAH Sbjct: 901 HQLMENCTRIDVPLLVEVGSGENWDQAH 928 >UniRef50_P43741 DNA polymerase I n=222 Tax=cellular organisms RepID=DPO1_HAEIN Length = 930 Score = 1125 bits (2911), Expect = 0.0, Method: Composition-based stats. Identities = 584/932 (62%), Positives = 708/932 (75%), Gaps = 6/932 (0%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 M QI NPL+LVDGSSYLYRA+HAFP LTN+AGEPT AMYGVLNML+SLI Q +PTH AV Sbjct: 1 MAQIATNPLVLVDGSSYLYRAFHAFPSLTNAAGEPTSAMYGVLNMLKSLISQVQPTHIAV 60 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 VFDAKGKTFRDE+FE YKSHRPPMPDDLR QI+PLH M++A+G+PLL V G+EADDVIGT Sbjct: 61 VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGIEADDVIGT 120 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL 180 LA +A G+ VLISTGDKDMAQLV NI LINTM N++L + V+ KYG+PPELIID+L Sbjct: 121 LALQASSLGKKVLISTGDKDMAQLVDDNIMLINTMNNSLLDRKGVIEKYGIPPELIIDYL 180 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 ALMGDS+DNIPGV GVGEKTA LLQG+G + +YA EK+A L RGAK + KL K Sbjct: 181 ALMGDSADNIPGVAGVGEKTALGLLQGIGSMAEIYANLEKVAELPIRGAKKLGEKLLAEK 240 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 A LSY LATIKTDVEL +T +QL + + ++L+ F +YEFKRW +V G + Sbjct: 241 NNADLSYTLATIKTDVELNVTTDQLLLGESQKDQLIEYFARYEFKRWLNEVMNGADSITQ 300 Query: 301 GAKPAAKPQETSVADEA----PEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDT 356 + K + + I Y T+L + L WI KL A + A DT Sbjct: 301 TTEQPVKMNQYKATSQDQSAVENTPKIQIDRTKYETLLTQADLTRWIEKLNAAKLIAVDT 360 Query: 357 ETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALK 416 ETDSLD +SANLVG+SFA+E G AAY+P+ DYLDAP + + AL +KP+LE+ K Sbjct: 361 ETDSLDYMSANLVGISFALENGEAAYLPLQLDYLDAPKTLEKSTALAAIKPILENPNIHK 420 Query: 417 VGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEI 476 +GQN+K+D I A +GIEL+G+ FDTML SY LNS GRH+MD LA+R+L H+TI FE + Sbjct: 421 IGQNIKFDESIFARHGIELQGVEFDTMLLSYTLNST-GRHNMDDLAKRYLGHETIAFESL 479 Query: 477 AGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPV 536 AGKGK+QLTFNQI LE+A YAAEDADVT++L +W LQ+ + +++ +E+PL+ V Sbjct: 480 AGKGKSQLTFNQIPLEQATEYAAEDADVTMKLQQALWLKLQEEPTLVELYKTMELPLLHV 539 Query: 537 LSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGI 596 LSR+ER GV ID L S E+ RL LEK+A+ +AG+ FNL+STKQLQ ILF+K + Sbjct: 540 LSRMERTGVLIDSDALFMQSNEIASRLTALEKQAYALAGQPFNLASTKQLQEILFDKLEL 599 Query: 597 KPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVH 656 L+KTP GAPST+EEVLEEL+ + LPK+++++RGL+KLKSTYTDKLP M+N +TGRVH Sbjct: 600 PVLQKTPKGAPSTNEEVLEELSYSHELPKILVKHRGLSKLKSTYTDKLPQMVNSQTGRVH 659 Query: 657 TSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAH 716 TSYHQAVTATGRLSS+DPNLQNIP+RNEEGR IRQAFIA E Y IV+ADYSQIELRIMAH Sbjct: 660 TSYHQAVTATGRLSSSDPNLQNIPIRNEEGRHIRQAFIAREGYSIVAADYSQIELRIMAH 719 Query: 717 LSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQ 776 LS D+GL+ AF++GKDIHR+TAAE+FG+ L+ VTSEQRR+AKAINFGLIYGMSAFGL+RQ Sbjct: 720 LSGDQGLINAFSQGKDIHRSTAAEIFGVSLDEVTSEQRRNAKAINFGLIYGMSAFGLSRQ 779 Query: 777 LNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARR 836 L I R +AQKYMDLYF+RYP V ++M R +AK QGYVETL GRRLYLPDI SSN RR Sbjct: 780 LGISRADAQKYMDLYFQRYPSVQQFMTDIREKAKAQGYVETLFGRRLYLPDINSSNAMRR 839 Query: 837 AAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAV 896 AER AINAPMQGTAADIIKRAMI +D ++ P + MIMQVHDELVFEV + V Sbjct: 840 KGAERVAINAPMQGTAADIIKRAMIKLDEVIR-HDPDIEMIMQVHDELVFEVRSEKVAFF 898 Query: 897 AKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 +QI Q ME L VPL+VEVG G+NWD+AH Sbjct: 899 REQIKQHMEAAAELVVPLIVEVGVGQNWDEAH 930 >UniRef50_B9M4P2 DNA polymerase I n=3 Tax=Deltaproteobacteria RepID=B9M4P2_GEOSF Length = 891 Score = 1109 bits (2869), Expect = 0.0, Method: Composition-based stats. Identities = 419/927 (45%), Positives = 582/927 (62%), Gaps = 38/927 (4%) Query: 4 IPQN-PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 +P+ L L+DGSSY+YRAY+A L++ G PT A+YG + ML ++ KP H AVVF Sbjct: 1 MPEKPKLYLIDGSSYIYRAYYAIRHLSSPKGFPTNALYGFIQMLLKVVKDRKPDHLAVVF 60 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 DA TFR+E++ YK++R MPDDLR QIEP+ V+A +P+L + G EADD+IGT+A Sbjct: 61 DAGKLTFRNEIYPAYKANRSAMPDDLRLQIEPIKEAVRAFRIPVLELPGFEADDIIGTIA 120 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLAL 182 + EK G +I TGDKD+ Q+VT ++TL++TM + GP EVV ++GVPPE ++D LAL Sbjct: 121 CDCEKKGMAAVIVTGDKDLMQIVTDSVTLLDTMKDKASGPAEVVERFGVPPERVVDILAL 180 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 GDSSDNIPG+PG+GEKTA L+Q LD L + G + +L + + Sbjct: 181 AGDSSDNIPGIPGIGEKTAIKLIQEHHSLDQLLENASVVKG-------KVGERLREFADQ 233 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A LS +LATI+ +V + + P L LF++Y F ++ Sbjct: 234 ARLSRRLATIECNVPVPYSYGDFAASPPDNRLLGDLFREYGFTTLMKEL----------- 282 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 + +S D+Y TIL A + KL +FA D ET SL+ Sbjct: 283 -----------------TSVATLSSDDYRTILSAGDFSALMDKLGTQSIFAIDLETTSLN 325 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 A +VG+SF+ A YIPVAH YL PDQ+S L+ L+PLL D K+GQN+K Sbjct: 326 PFEAEIVGISFSFSDHQAYYIPVAHHYLGVPDQLSLAHVLQALRPLLLDPAIKKIGQNIK 385 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 YD +L GIE+ GI DTML SY+LN H +++LA L HK I++ ++AG GK+ Sbjct: 386 YDYQVLRRAGIEMEGIWCDTMLASYLLNPNRSSHGLNALAVELLDHKMISYADVAGSGKD 445 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 Q F Q+ +E+A Y+ EDAD T LH P +++ G + +EMPLV +L+ +E Sbjct: 446 QKNFAQVEVEKASIYSCEDADATWLLHKLFLPQIEES-GMERLLFELEMPLVKILAEMEL 504 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 GVK+D +L S +LAELE++ + AG FN++S KQL +LFE + KKT Sbjct: 505 YGVKLDLVLLQKLSAGFGSQLAELEREIFQCAGTTFNINSPKQLGEVLFEHLQLPCGKKT 564 Query: 603 PGGA-PSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 ST+ + LE LA ++ + ++IL+YR L+KLKSTYTD LP ++ ++GR+HTSY+Q Sbjct: 565 KTKTGWSTNVDELERLAAEHEIGRLILQYRSLSKLKSTYTDALPKLVYSESGRIHTSYNQ 624 Query: 662 AVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDK 721 AVT TGRLSS++PNLQNIP+R+EEGR IR AFIA E +I+SADYSQIELR++AHLS+D+ Sbjct: 625 AVTNTGRLSSSEPNLQNIPIRSEEGRSIRHAFIAEEGCLILSADYSQIELRVLAHLSQDR 684 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 AFA+ +DIH TAAEVFGL VT E RR AK INFG+IYG F LA++L + Sbjct: 685 VFCDAFAKDEDIHTRTAAEVFGLFPGMVTPEMRRQAKTINFGVIYGQGPFSLAKELGVST 744 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 K A++++D YF+R+ G +++ +A+ +G+V T+ GRRL +PDI S+NG R+ A+R Sbjct: 745 KVAKEFIDNYFDRHAGARVFLDGCVREAEAKGHVTTILGRRLPIPDINSTNGNIRSFAQR 804 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 AIN P+QG+AADIIK+AM+ V ++ E + R+IMQVHDELVFEV ++ + K + Sbjct: 805 NAINYPIQGSAADIIKQAMVRVSGRMRREGLKSRLIMQVHDELVFEVPLEEKLTMEKLVC 864 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQAH 928 MEN L VPL V+V G NW +AH Sbjct: 865 HEMENALTLRVPLKVDVNFGSNWSEAH 891 >UniRef50_A1ASW3 DNA polymerase I n=12 Tax=Deltaproteobacteria RepID=A1ASW3_PELPD Length = 893 Score = 1094 bits (2830), Expect = 0.0, Method: Composition-based stats. Identities = 422/925 (45%), Positives = 583/925 (63%), Gaps = 39/925 (4%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 + L LVDGSSY+YRAY+A L++ G PT +YG ML L+ +++P H AVVFD Sbjct: 5 DTLYLVDGSSYIYRAYYAIRHLSSPTGHPTNTIYGFTQMLLKLLKEHQPRHVAVVFDVGR 64 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 +TFR EL+ YK++R +PDDLR Q+ P+ +V+A +P L ++G EADD+IG LA Sbjct: 65 ETFRTELYPDYKANRAALPDDLRVQMGPIRDLVRAFNIPALELAGFEADDIIGCLAARFS 124 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDS 186 G V+I TGDKD+ Q+VT +TL++TM +V+ ++GV P L+ D L L GD+ Sbjct: 125 ATGGRVVIVTGDKDLMQIVTERVTLLDTMKEKRSAITDVIERFGVEPRLVTDILGLAGDA 184 Query: 187 SDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLS 246 SDNIPGVPG+GEKTA L++ G LD L ++ G KL + ++ A LS Sbjct: 185 SDNIPGVPGIGEKTAMKLIREYGSLDQLLERASEVKG-------KNGEKLREFRDQALLS 237 Query: 247 YQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAA 306 +LATI+ DV +++ E+L Q+P E L LF+ Y F ++ Sbjct: 238 RRLATIRCDVPIQVELEELASQEPDREALNTLFRLYGFTTLIKELTGR------------ 285 Query: 307 KPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISA 366 + +S + Y T+ +E L+ + LE++ FA D ET SLD A Sbjct: 286 ----------------STLSSEGYCTVTAQEELEELVHALERSEEFAIDLETTSLDPRDA 329 Query: 367 NLVGLSFAIEPGVAAYIPVAH--DYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYD 424 +VGLSF+ A YIPV H D P Q+ R+ LE L+P LE K+GQN+K+D Sbjct: 330 EIVGLSFSFRDHQAWYIPVGHTSDAGLQPGQLPRDLVLERLRPQLESPSPTKIGQNIKFD 389 Query: 425 RGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQL 484 +LA G+ L GI FDTML SY+LN H +D+LA L H+ I++ E+ G GK Q Sbjct: 390 MQVLATNGVSLSGIRFDTMLASYVLNPSRQGHGLDALALEHLGHRMISYAEVTGSGKTQK 449 Query: 485 TFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNG 544 F+Q+ +E A RYA EDAD T LH K P L ++ G +F IEMPLVP+L+ +E +G Sbjct: 450 NFSQVEIETASRYACEDADATWLLHRKFSPLLAEN-GVEELFHRIEMPLVPILAGMENHG 508 Query: 545 VKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG-IKPLKKTP 603 V +D ++L + S + + R+A LE + ++AG FNL+S KQL +LFE+ K Sbjct: 509 VLLDIRLLADLSRDFSSRMATLEGRIFQLAGTTFNLNSPKQLGEVLFERLQLKTGKKTKG 568 Query: 604 GGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAV 663 ST EVL LA ++ + ++IL+YRGL+KLKSTY+D LP +++P+TGRVHTSY+Q V Sbjct: 569 KTGWSTDNEVLSSLAEEHEIARLILDYRGLSKLKSTYSDALPRLVHPRTGRVHTSYNQTV 628 Query: 664 TATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGL 723 T+TGRLSS+DPNLQNIP+R++EGR IR AFIAP +VI+SADYSQIELR++AHLS D Sbjct: 629 TSTGRLSSSDPNLQNIPIRSDEGRMIRHAFIAPPGHVIISADYSQIELRVLAHLSGDPVF 688 Query: 724 LTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKE 783 AF +DIH TA+EVFGL E VT+E RR AK INFG+IYG +F LARQL I RK Sbjct: 689 CQAFEHDEDIHTRTASEVFGLFPEMVTAEMRRQAKTINFGIIYGQGSFSLARQLGIARKT 748 Query: 784 AQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAA 843 A++++ Y ER+ + +++ QA+EQG+V T+ GRRL + DI S+NG RA A+R A Sbjct: 749 AEEFISAYKERHAKAVGFLDDCIRQAEEQGFVTTILGRRLPIADITSTNGNIRAFAQRNA 808 Query: 844 INAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQL 903 IN P+QG+AADIIK AMI VD +++E + R+IMQVHDELVFEV +D++ A+ + + Sbjct: 809 INYPIQGSAADIIKSAMIRVDGRIRSEGLKSRLIMQVHDELVFEVREDELLAMELLVEEE 868 Query: 904 MENCTRLDVPLLVEVGSGENWDQAH 928 M L +PL V++ G NW +AH Sbjct: 869 MSRAVELRIPLKVDISHGVNWSEAH 893 >UniRef50_Q65W28 PolA protein n=42 Tax=Bacteria RepID=Q65W28_MANSM Length = 965 Score = 1088 bits (2813), Expect = 0.0, Method: Composition-based stats. Identities = 590/958 (61%), Positives = 720/958 (75%), Gaps = 32/958 (3%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 M QI QNPL+LVDGSSYLYRA+HAFPPLTNS GEPTGAM+GVLNML+SLI Q +P+H AV Sbjct: 10 MAQIAQNPLVLVDGSSYLYRAFHAFPPLTNSLGEPTGAMFGVLNMLKSLITQVQPSHIAV 69 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 VFDAKGKTFRDELFE YKSHRPPMPDDLR QI+PLH +++A+G+PLL++ GVEADDVIGT Sbjct: 70 VFDAKGKTFRDELFEQYKSHRPPMPDDLRKQIQPLHDIIRALGIPLLSIEGVEADDVIGT 129 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL 180 LA +A AG+ VLISTGDKDMAQLV NI LINTM NT+L E V+ KYG+PPELIID+L Sbjct: 130 LALQASSAGKKVLISTGDKDMAQLVDDNIMLINTMNNTLLDREGVIEKYGIPPELIIDYL 189 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 ALMGDSSDNIPG+ GVGEKTA LLQG+G + +YA +K+A L RGAK + KL K Sbjct: 190 ALMGDSSDNIPGISGVGEKTALGLLQGIGSMAEIYANLDKVADLPIRGAKKLGEKLAAAK 249 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 A LSY LATIKTDVEL+L EQL + +EL+ F +YEFKRW + + K Sbjct: 250 ADADLSYVLATIKTDVELDLNPEQLIIGTANKDELIEYFARYEFKRWLNEALNDESSVTK 309 Query: 301 GAKPAAKPQETSVADEAPE-----VTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFD 355 + A K + + I Y T+ ++ L+ WI K+ + + A D Sbjct: 310 PQEQAVKINNYQATPALAKQESAVKNSVKIDRTLYETVDNQAKLQQWIEKIRQVKLVAVD 369 Query: 356 TETDSLDNISANLVGLSFAIEPGVAAYIPVAH-------------------------DYL 390 TET++LD + A LVG+SFA+E G A YIP+AH + Sbjct: 370 TETNALDPMLAELVGISFALENGEACYIPLAHVHQVAAQAENAQGDLFAESEQSSESRWE 429 Query: 391 DAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILN 450 Q+++ L LKPLLE+ + K+GQN+KYD I AN GI ++G+ FDTMLESY+LN Sbjct: 430 PVVGQLNKAECLSQLKPLLENPEIKKIGQNIKYDLTIFANNGINMQGVTFDTMLESYVLN 489 Query: 451 SVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHL 510 S GRH+MD LAER+L H TI FE+IAGKGKNQLTF+QI L++A YAAEDADVT++LH Sbjct: 490 ST-GRHNMDDLAERYLGHHTIAFEDIAGKGKNQLTFDQIELKKAAEYAAEDADVTMKLHQ 548 Query: 511 KMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKA 570 +W ++ + + +++ +E+PLV VLSRIERNGV ID + L S+E + +L LE KA Sbjct: 549 TLWREVAQSPELVKLYQEMELPLVSVLSRIERNGVLIDSRALLAQSKEFSQKLTALENKA 608 Query: 571 HEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEY 630 HE+AG+ FNL+STKQLQ ILF+K G+ LKKTP GAPST+EEVLEELA ++ LPK+++E+ Sbjct: 609 HELAGQHFNLASTKQLQEILFDKLGLPVLKKTPKGAPSTNEEVLEELAYEHELPKLLVEH 668 Query: 631 RGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIR 690 RGL+KLKSTYTDKLP M+N KTGRVHTSYHQAVTATGRLSS+DPNLQNIPVRNEEGRRIR Sbjct: 669 RGLSKLKSTYTDKLPQMVNRKTGRVHTSYHQAVTATGRLSSSDPNLQNIPVRNEEGRRIR 728 Query: 691 QAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVT 750 QAFIA + + +++ADYSQIELRIMAHLS DKGL AF+EGKDIHR+TAAE+FGL LE VT Sbjct: 729 QAFIARKGFKVIAADYSQIELRIMAHLSADKGLTAAFSEGKDIHRSTAAEIFGLALENVT 788 Query: 751 SEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAK 810 +EQRRSAKAINFGLIYGMS+FGL+RQL I R +AQ+YMDLYF+RYPGV +M R +AK Sbjct: 789 AEQRRSAKAINFGLIYGMSSFGLSRQLGIARGDAQRYMDLYFQRYPGVQTFMTNIREKAK 848 Query: 811 EQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAE 870 QGYVETL GRRLYLPDI+S+N RR AAER AINAPMQGTAADIIKRAMI +D + + Sbjct: 849 SQGYVETLFGRRLYLPDIQSANAMRRKAAERVAINAPMQGTAADIIKRAMIDIDKAIT-D 907 Query: 871 QPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 P + MIMQVHDELVFEV +D ++ + I LMEN +L VPL+V+VG G+NWD+AH Sbjct: 908 DPDILMIMQVHDELVFEVKEDKIEHYSALIKSLMENAAQLHVPLIVDVGVGDNWDEAH 965 >UniRef50_Q9HT80 DNA polymerase I n=9 Tax=Gammaproteobacteria RepID=DPO1_PSEAE Length = 913 Score = 1083 bits (2801), Expect = 0.0, Method: Composition-based stats. Identities = 574/929 (61%), Positives = 695/929 (74%), Gaps = 20/929 (2%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + Q PL+LVDGSSYLYRA+HA PPLT S G+PTGA+ GVLNML SL QY + AVVFD Sbjct: 1 MSQAPLVLVDGSSYLYRAFHALPPLTTSTGKPTGAVKGVLNMLLSLRKQYPDSPFAVVFD 60 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 AKG TFRDELF YK++RP MPDDLR Q+EPLHA V+A+GLPLL V GVEADDVIGTLAR Sbjct: 61 AKGPTFRDELFAEYKANRPSMPDDLRVQVEPLHASVRALGLPLLCVEGVEADDVIGTLAR 120 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALM 183 + A RPV+ISTGDKDMAQLV +ITL+NTMT + L + V K+GV PELIIDFLALM Sbjct: 121 SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSRLDVDGVKEKFGVGPELIIDFLALM 180 Query: 184 GDSSDNIPGVPGVGEKTAQALLQGLGGL-DTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 GD DNIPGVPGVGEKTA LL G+GG + LYA +K+ L RGAK + AKLE+N+E Sbjct: 181 GDKVDNIPGVPGVGEKTALGLLTGVGGGLEVLYASLDKVPELPIRGAKGLPAKLEENREQ 240 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A+LSYQLATIKTDVEL++ ++L +P E L+ L+++ EFK W D+ Sbjct: 241 AFLSYQLATIKTDVELDVEIDKLYPGEPQREALIALYRELEFKNWLDDLLR--------- 291 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 E A E E + + +Y +LD+ AW+ KLE+A + AFDTET S+D Sbjct: 292 -------EAKEAGENGEAETPIQAEVDYDVVLDQAGFDAWLKKLEEAELIAFDTETTSID 344 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 A +VG+SFA++ G AAY+P+AH Y+ P+Q+ R+ L LKPLLED K LKVGQ+ K Sbjct: 345 AQQAQVVGVSFAVKEGEAAYVPLAHSYMGVPEQLDRDAVLRALKPLLEDPKKLKVGQHAK 404 Query: 423 YDRGILANYG--IELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG 480 YD +LAN I LRG+A+DTMLESY+L+S A RHDMDSLA ++L H TI FE+IAGKG Sbjct: 405 YDINVLANASTPIALRGVAYDTMLESYVLDSTATRHDMDSLALKYLGHSTIRFEDIAGKG 464 Query: 481 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI 540 QLTF+QIA+E+AG YAAEDADVTL+LH +W L+ V +IEMPLVPVL+RI Sbjct: 465 AKQLTFDQIAIEQAGPYAAEDADVTLRLHQALWQKLEAIPSLARVLTDIEMPLVPVLARI 524 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK 600 ERNG +D +L S EL ++ LE++A+++AG+EFNL S KQL IL++K G+ L Sbjct: 525 ERNGALVDANLLGIQSRELGEKMVALERQAYDLAGQEFNLGSPKQLGAILYDKLGLPVLS 584 Query: 601 KTPGGAPSTSEEVLEELALDY-PLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 KT G PST+E VL ELA LPKVI++YR ++KLKSTYTD+LP INP+TGR+HTSY Sbjct: 585 KTATGQPSTAEAVLAELAEQDFELPKVIMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSY 644 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSR 719 HQAV ATGRLSS+DPNLQNIP+R EGRRIRQAF+AP+ Y +++ADYSQIELRIMAHL++ Sbjct: 645 HQAVAATGRLSSSDPNLQNIPIRTAEGRRIRQAFVAPQGYKLLAADYSQIELRIMAHLAK 704 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 D GLL AF D+HRATAAEVFG+PLE V+ +QRRSAKAINFGLIYGMSAFGLA+Q+ + Sbjct: 705 DDGLLDAFRHDLDVHRATAAEVFGVPLEDVSGDQRRSAKAINFGLIYGMSAFGLAKQIGV 764 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 RKEAQ Y+D YF RYPGVL YMERTRAQA EQG+VETL GRRLYLP+I S NGA R AA Sbjct: 765 ERKEAQAYIDRYFARYPGVLAYMERTRAQAAEQGFVETLFGRRLYLPEIHSKNGAMRKAA 824 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 ER AINAPMQGTAADI+KRAM+AVD WLQ R+I+QVHDELV EV +D V+ V + Sbjct: 825 ERTAINAPMQGTAADIMKRAMVAVDNWLQESGLDARVILQVHDELVLEVREDLVEQVCEG 884 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWDQAH 928 I LM LDVPL+VE G G NWD+AH Sbjct: 885 IRPLMSGAATLDVPLVVEAGVGSNWDEAH 913 >UniRef50_Q0F0N6 DNA polymerase I n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0N6_9PROT Length = 917 Score = 1081 bits (2796), Expect = 0.0, Method: Composition-based stats. Identities = 445/927 (48%), Positives = 582/927 (62%), Gaps = 18/927 (1%) Query: 7 NPLILVDGSSYLYRAYHAFP-PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 L+L+DG +Y++RA+HA LTNS GEPT A++G + MLRS++ + PTH AV FD K Sbjct: 2 PHLVLIDGPNYVFRAFHAVRHNLTNSKGEPTNAVFGYVQMLRSILKELGPTHVAVAFDPK 61 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 G TFR+ ++ YK+HRPPMP+DL AQ + + A L + V EADDVI TLAR+A Sbjct: 62 GGTFRNRMYADYKAHRPPMPEDLAAQWPSIFDVTDAFRLNRICVEDYEADDVIATLARQA 121 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185 E G V I + DKD+ QLV I +++TM GPEEV ++GV P+ I D LAL GD Sbjct: 122 EARGWDVSIVSTDKDLMQLVGERIWMLDTMKRKDYGPEEVKERWGVGPDRIQDLLALAGD 181 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 S+DNIPGVPG+G KTA LL+ G L+ + +I L + + A L Sbjct: 182 SADNIPGVPGIGPKTAVTLLEAYGDLEGVLTRAGEIKQQ------KRRENLIEFADDARL 235 Query: 246 SYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPA 305 SY+L + V L + + L V +P E L LF + EF+R A+ + Sbjct: 236 SYRLVALDEQVPLPIELDDLAVTEPDRERLAELFTRLEFRRMLAEFSGPAAIDTP----- 290 Query: 306 AKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNIS 365 + A+ T ++ + DE TL++ +A+L A + A DTET SL Sbjct: 291 -VVPQAKPAEPVRTSTPATVTPRIDRLVNDETTLQSLLAELSSAELIALDTETTSLQAHD 349 Query: 366 ANLVGLSFAIEPGVAAYIPVAHDYLD----APDQISRERALELLKPLLEDEKALKVGQNL 421 A LVGLSFA G A YIPV H D AP Q+ + L LKPLLED K G NL Sbjct: 350 AELVGLSFATRAGEAWYIPVGHRSTDLLVPAPQQLPLQHVLAALKPLLEDAAKRKCGHNL 409 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 KYD +L GIEL GIA D+ML +Y L +DS+AE +L + + E+AGKG Sbjct: 410 KYDAQVLRRAGIELAGIAADSMLLAYCLYPAKYPPSLDSVAEDYLNYHCTPYSEVAGKGA 469 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 Q+ F+++ + A YA EDAD+ L+L + L G L + IE+PL VL+ IE Sbjct: 470 KQVCFDEVPVSIATPYACEDADIALRLTGLLSAQLLTE-GRLTRHDEIELPLSQVLADIE 528 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 G +D ++L S LR+AELE + H AGE+FN+ S KQL +LFE I KK Sbjct: 529 WTGAHVDAEMLAGLSTGFGLRIAELESQIHAAAGEKFNIQSPKQLGVLLFETLAIPGGKK 588 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 T G +T +EVLE+LA ++ +P++IL+ R LAKLKSTYTD LP +I+ TGRVHTS++Q Sbjct: 589 TKSGQWATGQEVLEKLADEHEVPRLILQVRQLAKLKSTYTDALPKLIHRTTGRVHTSFNQ 648 Query: 662 AVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDK 721 A+T TGRLSS+DPNLQNIP+R+ EGR IR+AFIA E + +++ADYSQIELR+MAH S D Sbjct: 649 AITTTGRLSSSDPNLQNIPIRSAEGREIRKAFIAEEGHTLLAADYSQIELRLMAHFSGDA 708 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 L AFA G+DIH ATAA V G+ LE V+ E RR AKAINFG++YGMSAFGLA+QLNI R Sbjct: 709 ALCAAFANGEDIHAATAAAVNGIALEDVSGEMRRRAKAINFGILYGMSAFGLAKQLNISR 768 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 EAQ ++D YFERYP V +M+ T A+EQGYVETL G R+Y+P+I SSNG RRA AER Sbjct: 769 GEAQTFIDTYFERYPSVRGFMDDTLVLAREQGYVETLLGHRVYVPEISSSNGMRRAYAER 828 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 AINAP+QG+AADIIK AMI + L+ E P +I+QVHDEL+ E D +DAV+ + Sbjct: 829 TAINAPLQGSAADIIKVAMIHLHRRLRQEAPAAAIILQVHDELIVEAPVDQIDAVSAIMR 888 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQAH 928 Q ME L+VPL V++GSG +W AH Sbjct: 889 QTMEQAVTLEVPLTVDIGSGHSWYDAH 915 >UniRef50_Q6X9Q9 DNA polymerase I n=1 Tax=Spirochaeta thermophila RepID=Q6X9Q9_9SPIO Length = 897 Score = 1074 bits (2777), Expect = 0.0, Method: Composition-based stats. Identities = 408/926 (44%), Positives = 581/926 (62%), Gaps = 34/926 (3%) Query: 7 NPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 PL L+D +YRAY A P+ G T A+YG ML + +Y P + VV D+ Sbjct: 2 KPLFLIDAYGLIYRAYFALIRAPMRTKDGRNTSAIYGFFRMLFRFVKEYDPVYCGVVLDS 61 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 TFR++ FE YK+ R P+DL QI + +++A+G + ++G EADDV+GTLA Sbjct: 62 LTPTFREKTFEAYKATRQKTPEDLHPQIPVIEEILEALGFATVRMNGFEADDVMGTLAAM 121 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTN--TILGPEEVVNKYGVPPELIIDFLAL 182 A+ GRP + +GDKD+AQLVT + ++ + +L E V K+GV + I+DFLAL Sbjct: 122 AQAEGRPCFVVSGDKDLAQLVTKGVKIVRMDKDDFVVLDEEGVKEKWGVRADQIVDFLAL 181 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 +GD+SDNIPGV G+GEKTAQ LL G L+ +YA ++++ ++ KLE+ +E Sbjct: 182 VGDASDNIPGVEGIGEKTAQRLLAEYGSLEGVYAHLDELS-------PSLRRKLEEGRER 234 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A+LS LATI+TD++L LT L ++P + LF Y+ + +V + K Sbjct: 235 AFLSRDLATIRTDLDLSLTIGDLRRREPEVQRARELFLAYDIRSLAQEVGGSPSVGEK-- 292 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 EV + +Y + D +L W+ + + A DTETD LD Sbjct: 293 -------------PTLEVEGPSRAGVSYEVVTDRASLSRWVEEALERGAVAVDTETDGLD 339 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 ++ LVG+SFA++ G A Y+P+A + + + E+L PLL + +KVGQNLK Sbjct: 340 PLTCRLVGVSFAVDEGRACYVPLAAPDVRP---LPADVVREVLSPLLVSTEVVKVGQNLK 396 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 +D +L +G+ G FDTM+ +++L S AGR+++D LAE++L +TI ++++ KG Sbjct: 397 FDYHVLRRWGVRPEGPFFDTMVAAWLLESDAGRYNLDRLAEKYLGWRTIHYKDVVEKGA- 455 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 +F + + EAG YAAEDAD+ L+L + L+ G VF +EMPL+ +L+R+E Sbjct: 456 --SFETVPVAEAGVYAAEDADIALRLSRVLKERLEAE-GLGRVFYEMEMPLLSILARMEE 512 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 G+ +D + L EL R++ +EK+ E+ G EFN+ STKQLQ +LF ++G+ P+KKT Sbjct: 513 WGIGLDGEALSAFGRELEERISTIEKEIFELVGHEFNVGSTKQLQEVLFVERGLPPVKKT 572 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST VLEELA P+ +LEYR L KLK+TY D LP ++NP TGR+HT + Q Sbjct: 573 KTG-FSTDTSVLEELAARDPVAAKVLEYRSLTKLKNTYVDVLPGLVNPGTGRLHTWFSQV 631 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKG 722 TATGRLSS DPNLQNIP++ EEGRRIR+AF+ + +SADYSQIEL I+AHLS D Sbjct: 632 GTATGRLSSKDPNLQNIPIKTEEGRRIREAFVPQRGWWFLSADYSQIELVILAHLSEDPA 691 Query: 723 LLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRK 782 L AF EG+D+HRAT + +FG+P E VT EQRR AK INFG+IYGMSAF L+R+L IPRK Sbjct: 692 LCRAFREGEDVHRATGSLLFGVPPEAVTPEQRRIAKTINFGVIYGMSAFRLSRELGIPRK 751 Query: 783 EAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERA 842 EA++++D YF Y GV ++ERT A+A+E+GYV TL GR+ LP I S N ++ AER Sbjct: 752 EAERFIDAYFTTYAGVRAFIERTIAEAEEKGYVTTLFGRKRPLPYITSRNKTQKTGAERI 811 Query: 843 AINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQ 902 A+N P+QG+ ADIIK AMI +DA ++ RMI+QVHDEL+FEV ++++ + + + + Sbjct: 812 AVNTPIQGSGADIIKLAMIDLDAQMRRMGLASRMILQVHDELIFEVPPEELEVMKRLVRE 871 Query: 903 LMENCTRLDVPLLVEVGSGENWDQAH 928 ME RL VPL VE+G G NW +AH Sbjct: 872 RMEGVVRLSVPLRVEMGVGRNWGEAH 897 >UniRef50_A7HP95 DNA polymerase I n=11 Tax=Alphaproteobacteria RepID=A7HP95_PARL1 Length = 979 Score = 1072 bits (2773), Expect = 0.0, Method: Composition-based stats. Identities = 436/966 (45%), Positives = 600/966 (62%), Gaps = 52/966 (5%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTN-SAGEPTGAMYGVLNMLRSLIM----QYKPTHAAVV 61 + L LVDGS Y++RAYHA PPLT S G P GA+ G NML LI +++PTH AV+ Sbjct: 22 DHLFLVDGSGYIFRAYHALPPLTRKSDGMPVGAVAGFCNMLYKLIEDTKDEFEPTHLAVI 81 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 FDA KTFR++++ YK++R +DLR Q + +A G+P + G EADD+I T Sbjct: 82 FDAAAKTFRNDIYPEYKANRVEPSEDLRPQFALVRDATRAFGVPCIEKKGYEADDIIATY 141 Query: 122 AREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLA 181 AR A +AG V I + DKD+ QLV N+ +++TM + E+V+ K+GVPPE ++D A Sbjct: 142 ARLAHEAGARVTIVSSDKDLMQLVNDNVDMLDTMKLKTIAREQVIEKFGVPPEKVVDVQA 201 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 L GDS+DN+PGVPG+G KTA L+ G L+TL A +I L + E Sbjct: 202 LAGDSTDNVPGVPGIGIKTAAQLIGEYGDLETLLARAGEIKQQ------KRRENLIEFAE 255 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ--- 298 A +S +L + +V LE E + V++P E L+G FK EF T V + Sbjct: 256 QARISRRLVELDNNVPLEEPLEGMGVREPDPETLIGFFKDMEFNTLTRRVGERFNIDVDA 315 Query: 299 -----------------------AKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILD 335 K + A+ P+ + NYV + Sbjct: 316 IPAAGKHALITDGALAAPAGEEPKKEKQTVARTARGGTPGAVPKGIDADFNDANYVAVTA 375 Query: 336 EETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPD- 394 L WIA+ + A DTETDSL + A LVG+S ++ PG A YIP+ H D Sbjct: 376 LADLDEWIARAREQGFLAVDTETDSLFPMQARLVGVSLSLLPGEACYIPLQHGAGGGLDF 435 Query: 395 -------QISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESY 447 QI + A+ LKPLLED LK+GQNLK+D +L +GI+L+G DTML SY Sbjct: 436 ADAGGQPQIPLKEAIARLKPLLEDPSILKIGQNLKFDMTVLRQHGIQLKG-LDDTMLMSY 494 Query: 448 ILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQ 507 L++ H MD L+E L HK I+F E+AGKGK Q+TF+Q+ ++ A YAAEDADVTL+ Sbjct: 495 ALDAGVHGHGMDELSELHLGHKPISFAEVAGKGKAQITFDQVPVDRATAYAAEDADVTLR 554 Query: 508 LHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELE 567 L + P L + V+E +E PLV VL+ +ER GVK+D VL S + + ++A+ E Sbjct: 555 LWHILKPRLVAERRV-TVYETLERPLVSVLAEMERAGVKVDKAVLARLSGDFSQKMAQYE 613 Query: 568 KKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALD-YPLPKV 626 + +E+AGE FN+ S KQL ILF+KQ ++ +KT GA ST + LE LA + LP+ Sbjct: 614 DEIYELAGERFNIGSPKQLGEILFDKQSLEGGRKTKTGAWSTDADTLEALAAKGHELPQR 673 Query: 627 ILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEG 686 +L++RGL+KLKSTYTD LP INP+TGR+HT Y A T+TGRL+ST+PNLQNIPVR E+G Sbjct: 674 VLDWRGLSKLKSTYTDALPEYINPETGRIHTCYSLASTSTGRLASTEPNLQNIPVRTEDG 733 Query: 687 RRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPL 746 R+IR AF+A + +++SADYSQIELR++AH++ + L AFAEG DIH TA+E+FG+P+ Sbjct: 734 RKIRTAFVAEKGNLLISADYSQIELRLLAHIADIEALKKAFAEGLDIHAMTASEMFGVPI 793 Query: 747 ETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTR 806 E + S RR AKAINFG+IYG+SAFGLA QL IPR+EA +Y+D YF+R+PG+ YM+ TR Sbjct: 794 EGMESSVRRRAKAINFGIIYGISAFGLANQLGIPRQEAGEYIDRYFKRFPGIRAYMDDTR 853 Query: 807 AQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAW 866 A + GYVET+ GRR++LP I S N A ++ ERAAINAP+QG+AADII+RAMI + Sbjct: 854 DFAHKNGYVETIFGRRIHLPAINSKNPAEKSFMERAAINAPIQGSAADIIRRAMIRMPQA 913 Query: 867 LQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMEN----CTRLDVPLLVEVGSGE 922 L + RM++QVHDEL+FEV + + + +K + ++M + L VPL V+ + + Sbjct: 914 LADAKLAARMLLQVHDELIFEVPEKEAEKTSKVVSRIMSDAAAPAVALTVPLDVDARAAK 973 Query: 923 NWDQAH 928 NWD+AH Sbjct: 974 NWDEAH 979 >UniRef50_A0LCQ8 DNA polymerase I n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LCQ8_MAGSM Length = 911 Score = 1072 bits (2773), Expect = 0.0, Method: Composition-based stats. Identities = 425/927 (45%), Positives = 569/927 (61%), Gaps = 18/927 (1%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + L L+DGS YLYRA+ LT G PT A++G + MLR +I KP + FD Sbjct: 1 MTTQRLFLIDGSGYLYRAFFGVRNLTRRDGFPTNAIFGFIKMLRKVIEDEKPDFVTIAFD 60 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 K TFR + YK++R PMPD+LR QI +H ++ A +P +A+ G EADD+IGT AR Sbjct: 61 TKAPTFRHTMDAQYKANRKPMPDELRVQIPVIHDVIDAFNIPRIALEGYEADDIIGTFAR 120 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALM 183 AG V++ +GDKD+ QL+TP + + + + GPE+VV +GV E I D L L Sbjct: 121 LGCAAGVEVVVVSGDKDLMQLITPQVKMFDGSKDKWYGPEDVVESWGVAAERIPDLLGLA 180 Query: 184 GDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVA 243 GD+SDNIPGV G+G KTA L+ G L+ + E+I L + + A Sbjct: 181 GDTSDNIPGVGGIGPKTAAQLIAEFGSLEGVLHGAERIKQ------PKRRTALLEQADTA 234 Query: 244 YLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAK 303 S QLATI +V L + +Q+P L +++ F + A K LQA G++ Sbjct: 235 RRSLQLATINREVPLPFDLQGARMQRPNWARLREIYQDMSFATLARE--AEKQLQALGSE 292 Query: 304 PAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDN 363 A Q + + P NY I E +A++ +L+ P FA DTET L Sbjct: 293 AAPSIQIETQPESLPNQ-------PNYQVITSEAAFQAFMEQLKGLPRFAVDTETTDLHP 345 Query: 364 ISANLVGLSFAIEPGVAAYIPVAHDYLDAPD-QISRERALELLKPLLEDEKALKVGQNLK 422 SA LVG+S A +P VA YIPV H AP+ Q+ R L LKPLLE + K GQN+K Sbjct: 346 HSAELVGISIAWQPMVAYYIPVGHALDAAPEGQLPRADVLAALKPLLESPEIGKTGQNIK 405 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 YD I Y I ++GI D+ML SY+L H++D++A L TI FE++AGKG+ Sbjct: 406 YDYQIFKRYHITMQGIERDSMLYSYLLYGANRAHNLDAIATEELGRTTIKFEDVAGKGRK 465 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 ++ F+Q+ L A YA EDA+VT Q M P+L + G ++E IE PL+PVL+ +E Sbjct: 466 RIRFDQVPLHLAAPYACEDAEVTWQAAASMAPNLDREPGLKRLYETIERPLIPVLAEMEY 525 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 GV +D VL S + + R A L ++ HE+AGE FN++ST+QL ILFEK GIK K+T Sbjct: 526 AGVLVDRDVLSTMSADFSKRRARLVEEIHELAGEVFNVNSTQQLGHILFEKMGIKGGKRT 585 Query: 603 PGGAPSTSEEVLEELALDYP-LPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 G ST VL +LA D +P+ +L YR L KL+STYTD L +I+P TGRVHTSY+Q Sbjct: 586 KSG-FSTDVSVLSKLADDGEKIPQQVLAYRSLTKLQSTYTDALVALIHPYTGRVHTSYNQ 644 Query: 662 AVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDK 721 AVT TGRLSS+DPNLQNIP+R EEGR IR AFIAP + +++ADYSQIELR++AH+ Sbjct: 645 AVTLTGRLSSSDPNLQNIPIRTEEGRAIRTAFIAPAGWSLLAADYSQIELRVLAHMGNVS 704 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 L AF G DIH ATAAE+FG+PL VT E RR AK INFGL+YGMS FGLA++L I Sbjct: 705 RLKEAFHAGLDIHAATAAELFGVPLAQVTGEHRRMAKTINFGLVYGMSPFGLAKRLGIQN 764 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 EA+ YMDLYF RY GV ++M+ T A+ G+VETL GRR + DI ++ + R AER Sbjct: 765 NEARAYMDLYFARYDGVRQHMDATIRDARAHGFVETLGGRRCPIRDINATQRSLREFAER 824 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 AINAP+QG+A+D+IK AMI + LQA + RM++QVHDELV EV ++ AV + + Sbjct: 825 TAINAPLQGSASDLIKLAMIRLHGALQAGGFKARMVLQVHDELVLEVPDKELAAVKEVVR 884 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQAH 928 ME L +PL+V++G G+NW +AH Sbjct: 885 SCMEGVMTLSIPLVVDMGVGQNWGEAH 911 >UniRef50_B6R626 DNA polymerase I superfamily protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R626_9RHOB Length = 980 Score = 1051 bits (2719), Expect = 0.0, Method: Composition-based stats. Identities = 428/972 (44%), Positives = 583/972 (59%), Gaps = 57/972 (5%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTN-SAGEPTGAMYGVLNMLRSLIMQ-------YKPTH 57 + LIL+DGS++++RAYHA PPLT G P GA+ G NML ++ + +PTH Sbjct: 17 NDHLILIDGSTFIFRAYHALPPLTRKPDGLPVGAVSGFCNMLWKMMQEGPTKEEGDEPTH 76 Query: 58 AAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDV 117 AV+FD GKTFR++ + YK+HRPP P+DLR Q + +A G+P + G EADD+ Sbjct: 77 FAVIFDKSGKTFRNDFYPEYKAHRPPPPEDLRPQFGLIRQATRAFGVPAIEQQGYEADDL 136 Query: 118 IGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELII 177 I T AR+AE G V I +GDKD+ QLVT I +++TM N I+G EV K+GV PE ++ Sbjct: 137 IATYARQAEAQGARVTIVSGDKDLMQLVTDKIGMVDTMKNKIIGKPEVFEKFGVGPEKVV 196 Query: 178 DFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLE 237 + +L GDS DN+PGVPG+G KTA L+ G LDTL + E I K L Sbjct: 197 EVQSLAGDSVDNVPGVPGIGLKTAALLINEFGDLDTLLEQAETIKQ------KKRRENLI 250 Query: 238 QNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWL 297 + E A +S +L ++ V +E E V + +G K F T V Sbjct: 251 EFAEQARISKRLVQLEEAVPVETPVEDFSVCDVDGAQAVGFLKAMGFTSLTKKVADKTGA 310 Query: 298 QAKGAKPAAKPQETSVADEAP---------------------------EVTATVISYDNY 330 + + A E + P E++A I Y Sbjct: 311 VLENIEAADVVIEGWESTAKPAEQAEDSAGELEGKAWTAAPLAENVAAEISALPIDNSAY 370 Query: 331 VTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAH--- 387 T+ E LK WIA+ + A DTETD+L+ + + LVG+S + PG A YIP+AH Sbjct: 371 ETVSTVERLKEWIAEAYEVGYVAVDTETDALNAMESGLVGVSLSCTPGKACYIPLAHVDG 430 Query: 388 ------DYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFD 441 QI A+ LLKP+LED LK+ QN+KYD +L YG+E+ D Sbjct: 431 EGDLLGGGALLEGQIPLAEAITLLKPMLEDPAVLKIAQNMKYDWLVLKRYGVEMA-PFDD 489 Query: 442 TMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAED 501 TML SY L++ G + MD L++RWL H I F+E+ G GK+Q++F+++ L++A YAAED Sbjct: 490 TMLLSYALDAGMGGNGMDELSQRWLNHTPIPFKEVCGSGKSQISFDKVPLDKATAYAAED 549 Query: 502 ADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTL 561 ADVTL+L + P L + V+E +E P+V L+++ER G+ ID ++L S E Sbjct: 550 ADVTLRLWKILKPRLAAEE-MTVVYERLERPMVATLAKMERRGISIDRQMLSLLSGEFAQ 608 Query: 562 RLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALD- 620 A LE + H++AGE FN+ S KQL ILF K G+ KKT GA STS VL++LA Sbjct: 609 GAARLESEIHDVAGEIFNVGSPKQLGEILFGKMGLPGGKKTKTGAWSTSASVLDDLAAQG 668 Query: 621 YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIP 680 + LP I+E+R L+KLKSTYTD LP IN +TGRVHTS+ A T+TGRLSS++PN+QNIP Sbjct: 669 HELPSKIVEWRQLSKLKSTYTDALPSFINQETGRVHTSFSLASTSTGRLSSSEPNIQNIP 728 Query: 681 VRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAE 740 +R EGR+IRQAFIA + ++SADYSQIELR++AH++ L AFA+G DIH TA+E Sbjct: 729 IRTSEGRKIRQAFIAEKGKKLISADYSQIELRVLAHMADIPQLKQAFADGLDIHAMTASE 788 Query: 741 VFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLE 800 +FG+P+E + RR AKAINFG+IYG+SAFGLA QL I R EA Y+ YFER+PG+ + Sbjct: 789 MFGVPIEGMDPMVRRRAKAINFGIIYGISAFGLANQLGIARGEAGDYIKTYFERFPGIKD 848 Query: 801 YMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAM 860 YME T+ GYVET+ GRR + PD+ + N R ERAAINAP+QG+AADII+RAM Sbjct: 849 YMEETKKFVHANGYVETIFGRRAHYPDVNTKNPNMRQFYERAAINAPIQGSAADIIRRAM 908 Query: 861 IAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTR----LDVPLLV 916 + +D L+ +M++QVHDEL+FE+ +D VD K + ME T L VPL V Sbjct: 909 VRMDEVLETANLDAQMLLQVHDELIFELPEDQVDETKKLVIATMEKATEPALQLSVPLKV 968 Query: 917 EVGSGENWDQAH 928 E + +NW++AH Sbjct: 969 EAEAADNWEEAH 980 >UniRef50_B6IUP1 DNA polymerase I, putative n=2 Tax=Alphaproteobacteria RepID=B6IUP1_RHOCS Length = 987 Score = 1048 bits (2711), Expect = 0.0, Method: Composition-based stats. Identities = 419/960 (43%), Positives = 568/960 (59%), Gaps = 48/960 (5%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 L LVDGS +++RAYHA PPL G P A+ G NML L+ + K AV+FDAK Sbjct: 36 LYLVDGSGFIFRAYHALPPLNRPDGTPVNAVLGFTNMLMKLLAELKAEAVAVIFDAKRLN 95 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR+E + YK++RP P+DLR Q + V A LP L + G EADD+I T AR A + Sbjct: 96 FRNEFYPDYKANRPEPPEDLRPQFAIIREAVDAFCLPCLELEGYEADDLIATYARLAREQ 155 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSD 188 GRPV + + DKD+ QLV + L++ M ++GPEEV K+GVPPE ++D AL GDS D Sbjct: 156 GRPVTVVSSDKDLMQLVRDGVRLMDPMKGRLIGPEEVAEKFGVPPEKVVDVQALAGDSVD 215 Query: 189 NIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQ 248 N+PGVPG+G KTA L+ G L+TL +I KL +N E+A +S + Sbjct: 216 NVPGVPGIGVKTAAQLITEYGDLETLLERAGEIRQAG------RRQKLLENAELARISKR 269 Query: 249 LATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAG-------------- 294 L + V + + ++L V++P +L+ K F+ VEA Sbjct: 270 LVRLDDAVPVPVPLDRLRVREPDHHKLIDWLKVQGFRSVIHKVEAELAADGTLVDGAAPA 329 Query: 295 ---------KWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAK 345 ++ + P T V + + A Y + D + L WI + Sbjct: 330 PAPAGRAPRTDVRTALDSRSYAPAATPVPEARDDGVAPQPERVEYELVQDLDALDRWIER 389 Query: 346 LEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPD----------- 394 +A A DTETD L +SA LVG+S ++EPG A YIPV H P Sbjct: 390 AREAGTVAVDTETDGLTPVSAGLVGISLSVEPGRACYIPVQHIDPATPKGATGGLDLGGT 449 Query: 395 -----QISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYIL 449 QI+ AL LKPLLED LKVGQN+K+D I A +GI + DTML SY+L Sbjct: 450 PPPPPQIALADALARLKPLLEDPAVLKVGQNVKFDWQIFARHGIAMA-PIDDTMLISYVL 508 Query: 450 NSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLH 509 + H MD LA R L H TI ++E+ G GK+++TF+++ L++A YAAEDAD+TL+LH Sbjct: 509 GTGLHGHGMDELALRHLGHTTIKYDEVTGTGKSRITFDRVPLDKARDYAAEDADITLRLH 568 Query: 510 LKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKK 569 + DL + + ++E +E PLVPV++R+E GV +D VL S + R+ E+E + Sbjct: 569 RVLKHDLVRQH-MVTLYETVERPLVPVVARMESRGVLVDRAVLRQMSSDFAQRMLEMEAE 627 Query: 570 AHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALD-YPLPKVIL 628 ++A FN+ S KQL ILF++ + K GA T VLE LA + + +L Sbjct: 628 IQKLAPRAFNVGSPKQLGEILFDEMKLPGGSKGKSGAWGTDSGVLEGLAEQGVEIAQKVL 687 Query: 629 EYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRR 688 ++R LAKLKSTYTD L I+ +TGRVHTS+ A TATGRLSSTDPNLQNIP+R EEGR+ Sbjct: 688 DWRQLAKLKSTYTDALAEQIDARTGRVHTSFALAATATGRLSSTDPNLQNIPIRTEEGRK 747 Query: 689 IRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLET 748 IR+AF+A ++++S DYSQIELR++A ++ L AF +G DIH TA++VFG+PL+ Sbjct: 748 IRRAFVARPGHLLLSVDYSQIELRLVAEMAGVPALRRAFHDGIDIHAMTASQVFGVPLDQ 807 Query: 749 VTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQ 808 +TSE RR AKAINFG+IYG+S FGL RQL I EA ++ YFER+P + YME T+A Sbjct: 808 MTSEIRRKAKAINFGIIYGISGFGLGRQLGITPGEAGAFIRQYFERFPELQTYMETTKAF 867 Query: 809 AKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQ 868 A+E GYV TL GRR ++ I+ ARRA AER AINAP+QGTAADIIKRAM ++ L Sbjct: 868 AREHGYVTTLLGRRCWIQGIREKAPARRAYAERQAINAPIQGTAADIIKRAMARIEPALA 927 Query: 869 AEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 A + M++QVHDEL+FEV + V+ A + +ME L VPL+ E G NW +AH Sbjct: 928 AAKLDAAMLLQVHDELLFEVPEAQVEETAAVVRGVMEGAAGLGVPLVAEAGWAPNWAEAH 987 >UniRef50_A9ITV6 DNA polymerase I n=89 Tax=Proteobacteria RepID=A9ITV6_BORPD Length = 948 Score = 1047 bits (2708), Expect = 0.0, Method: Composition-based stats. Identities = 474/926 (51%), Positives = 624/926 (67%), Gaps = 25/926 (2%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 L+LVDGSSYLYRA+HA P L N+ GEPTGA+YGV+NMLR L+ +K +AA +FDA+ Sbjct: 45 NKTLLLVDGSSYLYRAFHAMPDLRNAQGEPTGALYGVVNMLRKLVSDHKADYAACIFDAR 104 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 GKTFRD+L+ YKSHRPPMP+DL AQIEP+H V+A+G +LA+ GVEADD+IGTLA +A Sbjct: 105 GKTFRDDLYPDYKSHRPPMPEDLAAQIEPIHQAVRALGWQVLAIEGVEADDIIGTLACQA 164 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185 G ++STGDKD+AQLV N+TL+NTM+ +L V NK+GVPP+ I+D+L L+GD Sbjct: 165 SGMGIRTIVSTGDKDLAQLVDANVTLVNTMSGEVLDETGVRNKFGVPPDRIVDYLMLVGD 224 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 + DN+PGV VG KTA L G +D+L + + I G++ L + L Sbjct: 225 AIDNVPGVAKVGPKTAAKWLAEFGSIDSLVEQADGIKGVA-------GNNLREAIGQFPL 277 Query: 246 SYQLATIKTDVELELTC---EQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 + QL T+K D +L + L +QP + L L+++Y F+ W ++ +G Sbjct: 278 TRQLLTVKCDCDLAGHIGGIDDLAPRQPDTDTLQALYERYGFRTWLRELTGDSQRVPQGD 337 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 + Y+ I W+A+ P+ A DTET SLD Sbjct: 338 ------------ARVIAEAPAAPAELRYLIISSWPAFDEWMAQAADTPLVALDTETTSLD 385 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 + A+LVG+S A+ PGVA YIP+AH D+ +Q+ + LE ++ L+D K+ + K Sbjct: 386 EMQASLVGISMALAPGVACYIPLAHRGPDSAEQLPKREVLERMRAWLQDPARPKLLHHAK 445 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 YD + AN G+ L GI DTML++Y+L S G ++ LA+R+L IT+EE+ GKG Sbjct: 446 YDAHVFANEGVALAGIQDDTMLQAYVLESHRGV-GLNDLAQRYLGRGGITYEELCGKGAK 504 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 Q+ F+++A+E+AG YA EDAD TLQLH + P + G ++ +E+ + VL+ +ER Sbjct: 505 QIGFDEVAVEQAGHYACEDADFTLQLHHALRPRVAADAGLERIY-QLEIQVSRVLTVVER 563 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 NGVK+D L S L + +LE++A+E+AG+ FNL+S KQL ILF + + ++KT Sbjct: 564 NGVKVDAAELGRQSHRLGQEMLQLEQRAYELAGQPFNLNSPKQLGEILFGRMQLPVVRKT 623 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 GGAPST EEVL LA DYPLP+V+LEYRGL+KLKSTYTDKLP MIN +TGRVHT Y QA Sbjct: 624 AGGAPSTDEEVLTRLAQDYPLPQVLLEYRGLSKLKSTYTDKLPRMINARTGRVHTHYSQA 683 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKG 722 TGRL+S+DPNLQNIPVR E GRR+R+AF+A V+VSADYSQIELRIMAH+S D Sbjct: 684 AVVTGRLASSDPNLQNIPVRTEAGRRVREAFVAEHG-VLVSADYSQIELRIMAHVSDDAN 742 Query: 723 LLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRK 782 L AFA GKDIHRATA+E+FG+ L+ V ++QRR+AKAINFGLIYGM FGLA L I R Sbjct: 743 LQQAFAAGKDIHRATASEIFGVALDEVGADQRRAAKAINFGLIYGMGVFGLASNLGITRD 802 Query: 783 EAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERA 842 AQ Y+D YF RYPGV +YME TR A++QGYVET+ GRRL LPDI++++G RR AERA Sbjct: 803 AAQAYIDRYFARYPGVAQYMEHTRQLARQQGYVETVFGRRLQLPDIRAASGPRRQGAERA 862 Query: 843 AINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQ 902 AINAPMQGTAAD+IK AM+AV WL AE+ RMIMQVHDEL+ EV ++DAV ++ + Sbjct: 863 AINAPMQGTAADLIKMAMVAVQDWLDAERLATRMIMQVHDELILEVPDGELDAVRARLPE 922 Query: 903 LMENCTRLDVPLLVEVGSGENWDQAH 928 LM RL VPL+ EVG G NW+QAH Sbjct: 923 LMCGVARLRVPLVAEVGVGPNWEQAH 948 >UniRef50_B8H5J7 DNA polymerase I n=23 Tax=Alphaproteobacteria RepID=B8H5J7_CAUCN Length = 982 Score = 1045 bits (2702), Expect = 0.0, Method: Composition-based stats. Identities = 418/952 (43%), Positives = 564/952 (59%), Gaps = 36/952 (3%) Query: 5 PQNPLILVDGSSYLYRAYHAFPPLTN-SAGEPTGAMYGVLNMLRSLIMQYK---PTHAAV 60 P L LVDGS+YL+RAYHA PPLT S G P GA+ G NML L+ + PTH AV Sbjct: 39 PAVRLFLVDGSAYLFRAYHALPPLTRKSDGLPVGAVQGFCNMLWKLLRDMQGDTPTHLAV 98 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 ++D KTFR+ L++ YK+HRPP P+DL Q + A G+P + + G EADD+I Sbjct: 99 IWDHSEKTFRNALYDQYKAHRPPPPEDLIPQFPLVREATLAFGVPAIELPGYEADDLIAA 158 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL 180 A +A G +I + DKD+ QLV +++ + M + E+V K+GV PE ++D Sbjct: 159 YACKARDIGGEAIIVSSDKDLMQLVGDGVSMYDPMKGVRIEREQVFEKFGVYPEKVVDVQ 218 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 AL GDS DN+PG PG+G KTA L+ G LDTL A +I L Sbjct: 219 ALCGDSVDNVPGAPGIGIKTAAQLITEYGDLDTLLARAGEIKQ------PKRRETLINFA 272 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 + LS L + D L + L V++P E L ++ EF+ V G Sbjct: 273 DQIRLSRALVKLDCDTPLPQPLDALTVREPDKEALAAFLEQMEFRSLARRVGDGSAAATP 332 Query: 301 GAKPAAKPQETS-----------VADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKA 349 G + A V I + Y + D TLKAW+AK Sbjct: 333 GTLDRPAAPPKAPVVSVSYMGAAARAAAHPVEPVKIDHAAYACVRDLATLKAWVAKATDK 392 Query: 350 PVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAH---------DYLDAPDQISRER 400 + AFDTETD+L + +A L G+S AI PG A YIP++H + +QI Sbjct: 393 GLVAFDTETDALSSATAGLCGVSLAIAPGEACYIPISHCEKADGLAFEAPADIEQIPLAD 452 Query: 401 ALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDS 460 + LKPLLED LKV QN KYD +LA +GI++ DTML SY+L + H MD Sbjct: 453 VIATLKPLLEDPAVLKVAQNAKYDIAVLARHGIQVA-PIEDTMLISYVLEAGLHGHGMDE 511 Query: 461 LAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHK 520 L+E L HK I F+++AG GK Q++F +AL EA YAAEDADVTL+L+ + P L + Sbjct: 512 LSELHLGHKPIPFKQVAGSGKGQISFKHVALPEATAYAAEDADVTLRLYHHLKPQLARA- 570 Query: 521 GPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNL 580 V+E +E P+ VL+ +E NGV++DP+ L S E +LR+A+ E +A E+ G FNL Sbjct: 571 SLSTVYETLERPMPAVLAMMENNGVRVDPEALRLLSNEFSLRMAQFEARAQELVGRPFNL 630 Query: 581 SSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTY 640 S KQ+ +LF + +K KKT G ST +VLE LAL++ LP+V+L++R L+KLK TY Sbjct: 631 GSPKQIGDVLFGEMQMKGGKKTATGQWSTDSDVLESLALEHELPRVLLDWRQLSKLKGTY 690 Query: 641 TDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYV 700 T+ L I P TGRVHTSY A T TGRLSS+DPNLQNIPVR EEGR+IR+AF+A +V Sbjct: 691 TENLIAAIAPSTGRVHTSYALAATTTGRLSSSDPNLQNIPVRTEEGRKIRKAFVAAPGHV 750 Query: 701 IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAI 760 ++SADYSQIELR++AH+ L AF EG DIH TA+E+F P+E + RR AKAI Sbjct: 751 LISADYSQIELRLLAHIGDIPQLKKAFQEGLDIHAMTASEMFDTPIEGMDPMIRRRAKAI 810 Query: 761 NFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDG 820 NFG++YG+SAFGLA QL I + EA Y+ YFER+PG+ YM+ T+A +E GYV T+ G Sbjct: 811 NFGIVYGISAFGLANQLGISQGEAGAYIKTYFERFPGIQAYMDATKAFVREHGYVTTIFG 870 Query: 821 RRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQV 880 R++ +PDI++ + A R AERAAINAP+QG AAD+++RAMI + L+A RM++QV Sbjct: 871 RKINIPDIEAKSAAHRQFAERAAINAPIQGAAADVMRRAMIRMPVALEAAGLSTRMLLQV 930 Query: 881 HDELVFEVHKDDVDAVAKQIHQLMENCTR----LDVPLLVEVGSGENWDQAH 928 HDELVFE + + + + +ME L +PL VE + NWD+AH Sbjct: 931 HDELVFEAPEAEAERACAVVRAVMEKAAEPAVALSIPLTVEARAASNWDEAH 982 >UniRef50_A9H4T5 DNA polymerase I n=43 Tax=Alphaproteobacteria RepID=A9H4T5_GLUDA Length = 943 Score = 1040 bits (2690), Expect = 0.0, Method: Composition-based stats. Identities = 400/951 (42%), Positives = 549/951 (57%), Gaps = 31/951 (3%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 M LILVDGS +++RA+HA PP+T G P A++G NML L+ + TH AV Sbjct: 1 MSGDAPIHLILVDGSGFIFRAFHALPPMTAPDGTPVNAVFGFTNMLARLLRDHVGTHLAV 60 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 +FDA TFR+ +++ YK+HRP P++LR Q + A G+P + +G EADD+I Sbjct: 61 IFDAGRVTFRNGIYDQYKAHRPEPPEELRPQFALVRDATAAFGVPGIEEAGWEADDLIAA 120 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL 180 AR AG + + DKD+ QL+ P + +++ + +GP+EV K+GV P+ +ID Sbjct: 121 YARLVTDAGGRCTVVSSDKDLMQLIRPGVEMLDPIRQKPIGPKEVEAKFGVTPDKVIDVQ 180 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 AL+GDS DN+PGVPG+G KTA AL+ G LD + G L ++ Sbjct: 181 ALIGDSVDNVPGVPGIGPKTASALIAEYGSLDAILD------GAPAMKPSKRRDSLIEHA 234 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 E A LS L T++ D L E L + P +L + F+ + K A Sbjct: 235 ERARLSRVLVTLREDAPCPLGLEDLICRDPDEVKLGEWLQSMGFRSLLHRMGM-KESAAA 293 Query: 301 GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDS 360 ++ P + AP + Y Y T+ L+ W+A+ A A DTETD Sbjct: 294 VGVASSAPAPAAAVAAAPTPSPDRAPYGPYETVRTAGALETWVAEARTAGFCAIDTETDG 353 Query: 361 LDNISANLVGLSFAIEPGVAAYIPVAHDYLD----------------------APDQISR 398 LD + A LVG+S A+ PG A YIP+AH Q+ Sbjct: 354 LDPLRAGLVGISLAVAPGRACYIPLAHTAEPPPPQLLPDLLLEPAPQDDAPDPVGPQLET 413 Query: 399 ERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDM 458 AL +L PLL D LK+ QN K+D +L G DTML SY + M Sbjct: 414 GLALAILGPLLADASVLKIFQNAKFDLLVLTRAGAPQPAPVDDTMLISYAQFAGRHGQGM 473 Query: 459 DSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQK 518 D L+ +L H I ++E+ G G+N++ F ++ + A YAAEDADVTL+L L + P L+ Sbjct: 474 DELSRLYLGHTPIPYDEVTGTGRNRVPFARVDVARATAYAAEDADVTLRLWLSLRPTLRI 533 Query: 519 HKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEF 578 H ++E +E PLV VL+ +ER G+ ID L S + R+A++E + +AG F Sbjct: 534 HHALA-LYEELERPLVAVLADMERAGIAIDVVELRRMSADFATRMAQMEAEIQALAGRSF 592 Query: 579 NLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALD-YPLPKVILEYRGLAKLK 637 N+ S KQL ILF++ G+ K+ GA T VL++LA + LP IL +R LAKLK Sbjct: 593 NVGSPKQLGEILFDEMGLPGGKRMKSGAWGTDSSVLQDLADQGHDLPGRILAWRQLAKLK 652 Query: 638 STYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE 697 STY D L +P T RVHTS+ A+T+TGRLSS +PNLQNIP+R EEG RIR+AF+A Sbjct: 653 STYADALVKQADPDTARVHTSFQMAITSTGRLSSNEPNLQNIPIRTEEGGRIRRAFVAAP 712 Query: 698 DYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSA 757 +V++SADYSQIELR++AH++ L AFA G+DIH TA+EVFG+P+E + RR A Sbjct: 713 GHVLLSADYSQIELRLLAHVADIPALREAFALGQDIHARTASEVFGIPIEGMDPLTRRRA 772 Query: 758 KAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVET 817 KAINFG+IYG+SAFGL RQL IP EA+ Y+D YF RYPG+ YME + +AK+QGYV T Sbjct: 773 KAINFGIIYGISAFGLGRQLGIPPGEARAYIDAYFARYPGIRAYMETVKQEAKDQGYVTT 832 Query: 818 LDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMI 877 GRR ++P I + RRA AER AINAP+QG AADIIKRAM+ + L + R++ Sbjct: 833 PFGRRCWVPGIADRSAVRRAYAERQAINAPLQGGAADIIKRAMVRLPHALASAGLDGRLL 892 Query: 878 MQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 +QVHDEL+FEV DA++ + Q+ME+ L VPL+VE G+G NW AH Sbjct: 893 LQVHDELLFEVRAGQQDALSALVKQVMESAASLSVPLVVETGTGANWADAH 943 >UniRef50_B9KYZ1 DNA polymerase I n=4 Tax=Thermomicrobia (class) RepID=B9KYZ1_THERP Length = 917 Score = 1039 bits (2687), Expect = 0.0, Method: Composition-based stats. Identities = 391/942 (41%), Positives = 547/942 (58%), Gaps = 51/942 (5%) Query: 1 MVQIPQ-NPLILVDGSSYLYRAYHAFPP-LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHA 58 M + + L+LVDG YRAYHA PP L SAGEPT ++G +ML ++ ++P + Sbjct: 1 MPERSRRPRLVLVDGHGLAYRAYHALPPTLATSAGEPTHVVFGFASMLLEVLNDFEPDYV 60 Query: 59 AVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVI 118 V FD +FR +L+E YK+HRP PDDL+ Q+E + ++ A+G+P++ G EADD+I Sbjct: 61 IVCFDTGR-SFRQQLYEEYKAHRPETPDDLKHQLERIRQLLDALGIPIVTREGYEADDLI 119 Query: 119 GTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMT-----NTILGPEEVVNKYGVPP 173 GTLA A G VLI TGD D+ QLV ++ +I + + V+ +YG PP Sbjct: 120 GTLAARATANGLEVLIVTGDTDLLQLVDEDVRVILPGRQRFGDYRVYDRQAVIERYGFPP 179 Query: 174 ELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMA 233 E + ++ AL+GD SDNIPGVPG+GEKTA L+Q L+ + +++ + Sbjct: 180 ERLPEYKALVGDPSDNIPGVPGIGEKTATRLIQRFSSLEEMLDRIDEVE------PPRLR 233 Query: 234 AKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEA 293 L +E S +LATI D ++ L EQ E +L LF++ EF+ + Sbjct: 234 EALRAARETVLASRRLATIVRDADITLDLEQARFGDFDRERVLQLFRELEFRSLVPRLPQ 293 Query: 294 GKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFA 353 + K A PA++ +L + L + LE FA Sbjct: 294 PRQPVRKTAAPASQR----------------------RAVLTDADLSDLVRDLETCQAFA 331 Query: 354 FDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEK 413 D ET +L + A+LVG++ A P + Y+P+ H D Q+ E+ L+ L P L + Sbjct: 332 LDVETTALHPMYADLVGIALATAPDRSYYVPLGHTTGDT--QLDIEQVLQRLAPFLRHPE 389 Query: 414 ALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITF 473 + + KYD +L G I FDTM+ +Y+L + LA L + Sbjct: 390 KQRYAHHGKYDALVLERAGFPRPHIDFDTMIAAYLL--GENAVGLKELAFTKLGWEMEEI 447 Query: 474 EEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPL 533 E+ G+GK QLT ++ + +YA D + T +L + P L+ H L +F IE+PL Sbjct: 448 TELIGRGKKQLTMDRAEIARVTQYACADVEATYRLVEVLRPQLEAH-NQLRLFTEIELPL 506 Query: 534 VPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEK 593 + VL +E+ G+ ID L S L +L LE++ +E+AG FN++S +QL T+LF++ Sbjct: 507 IDVLIDMEKAGIAIDVPYLEQLSIMLDGQLHALERRIYELAGHPFNINSPQQLSTLLFDE 566 Query: 594 QGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTG 653 G+ K+T G S S+EVLE L +P+ + ILEYR L KLKSTY D LP ++P+TG Sbjct: 567 LGLPRGKRTKTG-YSVSQEVLENLRDTHPIVEAILEYRQLLKLKSTYVDALPRQVHPQTG 625 Query: 654 RVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP--EDY-------VIVSA 704 RVHT +HQ V ATGRLSS+DPNLQNIP R E G +R+AFIA Y +++S Sbjct: 626 RVHTIFHQTVAATGRLSSSDPNLQNIPARGELGLAVRRAFIADNRPGYRIADEPILLLSV 685 Query: 705 DYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGL 764 DYSQIELR+MAH S+D LL AFAEGKDIH ATA+EVFG+PL+ VT E RR AK +NFG+ Sbjct: 686 DYSQIELRLMAHFSQDPALLRAFAEGKDIHAATASEVFGVPLDAVTPEMRRIAKVVNFGI 745 Query: 765 IYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLY 824 +YGM A+GLAR + R++AQ++++ YF+R+PGV Y+E TR +A E GYVETL GRR Y Sbjct: 746 MYGMQAYGLARDTGMSRQDAQRFIEAYFQRFPGVARYLEETRRRAAELGYVETLFGRRRY 805 Query: 825 LPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDEL 884 LP+I SSN ARR AAER A+N P+QGTAADI+K AMIAV L R RM++QVHDEL Sbjct: 806 LPEITSSNPARRQAAERMAVNMPLQGTAADIMKLAMIAVHRALAERGLRSRMLLQVHDEL 865 Query: 885 VFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 V EV + ++ + + M L VPL V+ +G NW Sbjct: 866 VLEVPESELATTTELVTTRMSRVVELSVPLEVDAKAGPNWAD 907 >UniRef50_Q21YU4 DNA polymerase I n=39 Tax=Betaproteobacteria RepID=Q21YU4_RHOFD Length = 957 Score = 1036 bits (2680), Expect = 0.0, Method: Composition-based stats. Identities = 479/959 (49%), Positives = 625/959 (65%), Gaps = 41/959 (4%) Query: 2 VQIPQNPLILVDGSSYLYRAYHAFPPLT----NSAGEPTGAMYGVLNMLRSLIMQYKPTH 57 L+LVDGSSYLYRA+HA P L + + PTGA+ G++NML+SL + + Sbjct: 8 SPAKPKTLLLVDGSSYLYRAFHAMPDLRAVPGDPSSAPTGAIRGMINMLQSLRKEVPADY 67 Query: 58 AAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDV 117 AA +FD KG TFRD L+ YK+HR PMPDDLR+QIEP+H +V+ MG +LAV GVEADDV Sbjct: 68 AACIFDDKGPTFRDALYPEYKAHRSPMPDDLRSQIEPIHEVVRLMGWKVLAVPGVEADDV 127 Query: 118 IGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELII 177 IGTLA A + G V++S+GDKD+AQLV +IT+I+TM V ++GVPP+L++ Sbjct: 128 IGTLAVTAARQGIEVIVSSGDKDLAQLVNSHITIIDTMNGRRRDVAGVEAEFGVPPQLMV 187 Query: 178 DFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLE 237 DF L+GD DN+PGVP VG KTA LQ G LD + A ++I G+ + L+ Sbjct: 188 DFQTLVGDVIDNVPGVPKVGPKTAAKWLQEYGSLDAVVANADQIKGV-------VGENLK 240 Query: 238 QNKEVAYLSYQLATIKTDVELELTCEQLEV------QQPAAEELLGLFKKYEFKRWTADV 291 ++ + L QL TIKTD +L+ L L ++KY FK + Sbjct: 241 KSLDWLPLGRQLLTIKTDCDLDGWMPDLPALDSIATGTMDTGALAIFYEKYGFKGLARTL 300 Query: 292 EAGKWLQAKG----------------------AKPAAKPQETSVADEAPEVTATVISYDN 329 G A + +P + A + + ++ + Sbjct: 301 GGGAASVASKASSGFGVGPKERSDAGSDPNSVRQLTREPGLFDEPEAASDPIPSSVTNLH 360 Query: 330 YVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDY 389 Y TIL E W+AK++ A + A DTET SLD + A +VG+SF++ PG AAYIP+AH Y Sbjct: 361 YDTILTWEAFDRWLAKVQAADLVALDTETTSLDEMRAQIVGISFSVTPGEAAYIPLAHAY 420 Query: 390 LDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYIL 449 DAP Q+ L LKP L+D K+GQ++KYDR + AN+GIE++G A DTML+SY+L Sbjct: 421 PDAPAQLPLADVLAKLKPWLQDASHKKLGQHVKYDRHVFANHGIEVQGYAHDTMLQSYVL 480 Query: 450 NSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLH 509 V H + SLAER L I+FE++ GKG NQ+ F+Q+ + +A +Y+ ED+D+TL +H Sbjct: 481 E-VTKPHGLASLAERHLGRSGISFEDLCGKGANQICFDQVDIAQAAQYSCEDSDMTLDVH 539 Query: 510 LKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKK 569 +WP LQ + ++ +E+ L RIERNGV ID L S EL R+ +LEK+ Sbjct: 540 RALWPLLQANDKLRFIY-ELEIASSEALYRIERNGVLIDGPTLAVQSHELGQRILQLEKE 598 Query: 570 AHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILE 629 AHE+AG+ FNLSS KQ+ I F K G+ +KKTP G+PST +EVL++LA DYPLP ILE Sbjct: 599 AHELAGQPFNLSSPKQIAEIFFTKLGLPVVKKTPTGSPSTDDEVLQKLAEDYPLPAKILE 658 Query: 630 YRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRI 689 +RGLAKLK TYTDKL + +P+TGRVHT Y QA+ TGRLSS +PNLQNIPVR EGRR+ Sbjct: 659 HRGLAKLKGTYTDKLAQLAHPRTGRVHTHYAQAIAVTGRLSSLEPNLQNIPVRTPEGRRV 718 Query: 690 RQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETV 749 R+AF+AP VI SADYSQIELRIMAH+S D LL AF +G D+HRATA+E+FG+ V Sbjct: 719 REAFVAPPGSVIASADYSQIELRIMAHISGDAALLLAFHDGIDVHRATASEIFGVDRAQV 778 Query: 750 TSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQA 809 TSEQRR AK INFGLIYGMSA+GLA+ L+I A+ Y++ YF+RYPGV YME TRA A Sbjct: 779 TSEQRRYAKVINFGLIYGMSAYGLAKALSIDNTAAKNYIERYFDRYPGVKNYMEHTRALA 838 Query: 810 KEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQA 869 K QGYVET+ GRRLYLP+I S NG RR+ AERAAINAPMQGTAAD+IK +M+ V + Sbjct: 839 KRQGYVETVFGRRLYLPEINSPNGPRRSGAERAAINAPMQGTAADLIKLSMVKVQQVIDE 898 Query: 870 EQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 E+ +MIMQVHDELVFEV + ++D V ++ +LM L VPLL EVG G NWD+AH Sbjct: 899 EKRATKMIMQVHDELVFEVPESEIDWVRHEVPRLMAGVAHLKVPLLAEVGVGANWDKAH 957 >UniRef50_A6KZN3 DNA polymerase I n=15 Tax=Bacteroides RepID=A6KZN3_BACV8 Length = 971 Score = 1031 bits (2667), Expect = 0.0, Method: Composition-based stats. Identities = 413/985 (41%), Positives = 577/985 (58%), Gaps = 78/985 (7%) Query: 7 NPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 + L L+D + +YRAY+AF P NS G T A+ G +N L ++ + PTH V FD Sbjct: 2 DKLFLLDAYALIYRAYYAFIKSPRINSKGFNTSAVLGFVNTLEEVLKKENPTHIGVAFDP 61 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 G TFR E +E YK+ R P+ +R + + +++A +P+L V G EADDVIGTLA E Sbjct: 62 AGPTFRHEAYEQYKAQREETPEVIRLSVPIIKDIIRAYRIPILEVPGYEADDVIGTLATE 121 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTN---TILGPEEVVNKYGV-PPELIIDFL 180 A K G + T DKD QLV N+ + ++G EEV K+ + P +ID L Sbjct: 122 AGKRGITTYMMTPDKDYGQLVGGNVFMYRPKHTGGFEVMGIEEVKAKFDIQSPAQVIDML 181 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 LMGDSSDNIPG PGVGEKTAQ L+ G ++ L + ++ G + K+E N+ Sbjct: 182 GLMGDSSDNIPGCPGVGEKTAQKLIAQYGSIENLLSHSAELKG-------ALKTKVETNR 234 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYE--------FKRWTADVE 292 ++ S LATIK DV + L ++L+ ++P EEL +F++ E F R Sbjct: 235 KMIEFSKFLATIKIDVPIALNMDELKREEPNEEELRKIFEEMEFRTLIDRVFNRDKKSAF 294 Query: 293 AGKWLQAKGAKPAAKPQET----------------------------------------- 311 AG + A G P + + Sbjct: 295 AGTYTDATGNDPQGRNRTPGGSARQGNTPNGSGQLSLFGEPASNGESPASPSSPQGNLFA 354 Query: 312 ------SVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNIS 365 + +++ + +Y + EE + L +F+ DTET D I+ Sbjct: 355 EFTDGGTESEKYSNLACLDNLKYDYQLVDTEEKRTELLQNLLTKEIFSLDTETTGTDPIT 414 Query: 366 ANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDR 425 A LVG+SF+ A Y+PV D +A ++ + +P E E LKVGQN+KYD Sbjct: 415 AELVGMSFSYAENQAFYVPVPADRAEA------QKIVNEFRPAFEKEGVLKVGQNIKYDM 468 Query: 426 GILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAG-KGKNQL 484 +L NYG E+RG FDTM+ Y+L RH+MD LAE +L ++TI EE+ G KGK Q Sbjct: 469 LVLGNYGTEVRGPLFDTMVAHYVLQPEL-RHNMDYLAEIYLHYQTIHIEELIGPKGKGQK 527 Query: 485 TFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNG 544 ++ E +YA EDADVTL+L + +L+ + +F IEMPLVPVL+ +ERNG Sbjct: 528 NMRDLSPEAIYKYACEDADVTLKLKNILEQELKTNDA-EKLFYEIEMPLVPVLAYMERNG 586 Query: 545 VKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGI-KPLKKTP 603 V++D + L SE T R+ ++E++ H++AG +FN++S KQ+ +LF+K I + KKT Sbjct: 587 VRVDTEALKQTSEHFTARMNQIEEEVHQLAGTDFNIASPKQVGEVLFDKLRIVEKAKKTK 646 Query: 604 GGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAV 663 G TSEEVLE L + + ILE+RGL KL TY D LPL+IN +TG++HTS++Q V Sbjct: 647 TGQYVTSEEVLESLRGKHEIVGKILEHRGLKKLLGTYIDALPLLINKETGKIHTSFNQTV 706 Query: 664 TATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGL 723 TATGRLSS++PNLQNIP+RNE+G+ IR+AFI + SADYSQIELRIMAHLS D + Sbjct: 707 TATGRLSSSNPNLQNIPIRNEDGKEIRKAFIPDDGCEFFSADYSQIELRIMAHLSGDTNM 766 Query: 724 LTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKE 783 + AF EG DIH ATAA+V+ + ++ VT EQR AK NFG+IYG+S FGLA ++N+ RKE Sbjct: 767 IEAFKEGDDIHAATAAKVYKISIDKVTREQRSKAKTANFGIIYGISVFGLAERMNVDRKE 826 Query: 784 AQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAA 843 A++ +D YFE YP + EYM+++ A+ QGY+ET+ GR+ YLPDI S N R AER A Sbjct: 827 AKELIDGYFETYPQIKEYMDKSIDLARGQGYIETIFGRKRYLPDINSRNSVVRGYAERNA 886 Query: 844 INAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQL 903 INAP+QG+AADIIK AM+ + Q+E + +MI+QVHDEL F V ++ + V K + + Sbjct: 887 INAPIQGSAADIIKVAMVRIYQRFQSESIKSKMILQVHDELNFSVLPEEKEKVQKIVIEE 946 Query: 904 MENCTRLDVPLLVEVGSGENWDQAH 928 MEN R+ VPL + G G NW +AH Sbjct: 947 MENAYRMQVPLRADCGWGSNWLEAH 971 >UniRef50_A0LIP7 DNA polymerase I n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LIP7_SYNFM Length = 902 Score = 1028 bits (2659), Expect = 0.0, Method: Composition-based stats. Identities = 383/929 (41%), Positives = 559/929 (60%), Gaps = 29/929 (3%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 M + + LVDGSSY+YRAY+A LTNS G PTGA+ G ML ++ + KP + V Sbjct: 1 MTEQAR-TFYLVDGSSYIYRAYYAVSRLTNSRGFPTGAVLGFAQMLDKVVREKKPDYICV 59 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 VFDA G TFR E++ YK+ R P+D+ AQI + +V+ G+P + + G EADD+I T Sbjct: 60 VFDAPGPTFRHEMYAPYKATRQKAPEDMIAQIPYIKDLVRFRGIPQMELPGYEADDLIAT 119 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNI-TLINTMTNTILGPEEVVNKYGVPPELIIDF 179 L A + V++ + DKD+ QL+ + + + + EV ++YGVPP ++D+ Sbjct: 120 LTHWAVEQDIEVVVVSSDKDLHQLIDDPVVRQWDPQKDRVFMEWEVEDRYGVPPGRMVDY 179 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 LAL+GDSSDN+PGV G+G+KTA+ LLQ G LD +YA ++ G+ ++ KLE++ Sbjct: 180 LALVGDSSDNVPGVKGIGDKTARQLLQEWGSLDRIYANLARV------GSASVRDKLEKH 233 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 +E A LS +L + + DV +E E P +L+GLF++ EF+ + Sbjct: 234 REEALLSRRLVSFREDVPVERKLEAFAPGPPLKSQLIGLFEELEFRSLLDSLRKELNAV- 292 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 A + + L+ +L PV + ET Sbjct: 293 ------------------EPAAAAPAGRTKHKIAGSMDELRTLAERLAGEPVVSIQVETT 334 Query: 360 SLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQ 419 D ++++L GLSF E A Y+P+ D + ++ AL L+P+L + K+G Sbjct: 335 RKDAMASDLAGLSFGFEDDGAWYVPLGPDGSEGDGRLPAAVALAALEPVLGRSRPAKIGH 394 Query: 420 NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 +LK + +GIELRGIAFDTM+ +Y+L+ + +D +A L ++E++ GK Sbjct: 395 DLKTAWIVFKKHGIELRGIAFDTMVAAYLLDPGKQNYGIDRVAAECLGENIDSYEDVTGK 454 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 GK+Q+ F+ I + A Y+ AD ++H + L + + +FE IE+PL+ VL+R Sbjct: 455 GKSQVGFDTIDIGRAAAYSCAAADAARRMHPVLKRKLDESR-LTELFEKIELPLITVLAR 513 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 +E G+ D + L + S + L +++A E+FN+ S KQL ILFEK G++ + Sbjct: 514 MEFRGITADAEKLESLSIDFQKALDRTADTIYDLAKEKFNIQSPKQLAYILFEKLGLRVV 573 Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 KKT G PST VLEELAL++P+ +L +R LAKLK TY D L +INP+TGR+HTSY Sbjct: 574 KKTKSG-PSTDMAVLEELALEHPIADHVLVFRTLAKLKGTYADALGKLINPRTGRIHTSY 632 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSR 719 +Q V ATGRLSS+DPNLQNIP+R EEGR+IR AFI ++++SADYSQIELRI+AH S+ Sbjct: 633 NQTVAATGRLSSSDPNLQNIPIRTEEGRKIRSAFIPAPGWLLLSADYSQIELRILAHCSK 692 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 D+ LL AF + +DIHR TAAE+FG+ VT E RR AK INFG+IYGM FGLA++L I Sbjct: 693 DEHLLEAFRDDEDIHRRTAAEMFGVSPIEVTPEMRRQAKTINFGIIYGMGPFGLAQRLRI 752 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 K A+ +D YF+ Y GV +++ T A+ GY ETL GRR ++P+++S N R Sbjct: 753 STKTARTAIDKYFQGYRGVRRFIDTTIELARRLGYSETLLGRRRFIPELQSRNKTIRQLG 812 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 ER AIN P+QGTAAD+IK+AMI + L R M++QVHDELVFE ++++ A + Sbjct: 813 ERLAINTPLQGTAADLIKKAMIDAEDALNGSGLRTVMLLQVHDELVFETPREELAAAQEL 872 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWDQAH 928 + ++ME+ +LDVPL VE+G G+NW +AH Sbjct: 873 VRRVMEDVWKLDVPLKVELGWGDNWAEAH 901 >UniRef50_D0XR83 DNA polymerase I n=2 Tax=Alphaproteobacteria RepID=D0XR83_9CAUL Length = 994 Score = 1025 bits (2651), Expect = 0.0, Method: Composition-based stats. Identities = 403/960 (41%), Positives = 552/960 (57%), Gaps = 44/960 (4%) Query: 5 PQNPLILVDGSSYLYRAYHAFPPLTN-SAGEPTGAMYGVLNMLRSLIMQYK----PTHAA 59 P L L+D S+Y++RAYHA PPLT S G P GA+ G NML L+ K PTH A Sbjct: 43 PAVRLWLIDASAYIFRAYHALPPLTRKSDGLPVGAVQGYCNMLWKLLKDMKGADGPTHLA 102 Query: 60 VVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIG 119 +FD KTFR+ L++ YK++R P+DL Q + +A G+ + + G EADD+I Sbjct: 103 AIFDHSEKTFRNALYDQYKANRSAPPEDLVPQFPLVRDATRAFGVHCVELPGYEADDLIA 162 Query: 120 TLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDF 179 T A + AG +I + DKD+ QL+ P++ + + M + L + V+ K+GV P+ +ID Sbjct: 163 TYACKVRDAGGECVIVSSDKDLMQLIGPSVVMWDPMKDRRLAEDAVMEKFGVTPDKMIDL 222 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 AL+GDS DN+PG PG+G KTA LL G LDTL +I L Sbjct: 223 QALIGDSVDNVPGAPGIGPKTAAQLLDEYGDLDTLLERAGEIKQ------PKRRETLINF 276 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 ++ LS QL + D + V+ P + L + EF+ V GK Sbjct: 277 RDQILLSRQLVRLTCDAPAPEPIDDFRVRDPDPQTLADFLETMEFRSLLRRVGDGKLAGH 336 Query: 300 KGAKPAAKPQETSVADEAP----------EVTATVISYDNYVTILDEETLKAWIAKLEKA 349 G+ A A +V + +D Y I D L A+IA+ +A Sbjct: 337 DGSAFAPARPAPLSAPVISPRYAPQAVSADVEKQSVDHDAYHCIRDLADLDAFIARATEA 396 Query: 350 PVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAP---------------- 393 V FDTETD+L A L G+S AI P A Y+P+ H++ Sbjct: 397 GVVGFDTETDALSATHAGLCGVSLAIGPNDACYVPLTHEHPPVEGAGGLDFGGDTDARPP 456 Query: 394 -DQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSV 452 DQ+ + L LK LLED LKV QN KYD ++A GI + DTML SY+L Sbjct: 457 LDQLDKPTVLARLKGLLEDPGVLKVVQNGKYDLAVMARRGIRVA-PIDDTMLISYVLEGG 515 Query: 453 AGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKM 512 H MD L+ L H+ I F+ +AG GK Q +F + L+ A YAAEDADVTL+L + Sbjct: 516 LHGHGMDELSRLHLGHEPIPFKSVAGTGKAQKSFKHVELKPATCYAAEDADVTLRLWRIL 575 Query: 513 WPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHE 572 P L + V+E +E + VL+ +E G+++DP L S E LR+AELE +AHE Sbjct: 576 KPRLATER-LATVYETLERGMPAVLADMELRGIRVDPARLRRLSSEFGLRMAELEAQAHE 634 Query: 573 IAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRG 632 IAG FN+ S +Q+ ILF + + KKT G T LE LA + LP+V+L++R Sbjct: 635 IAGRPFNVGSPRQIGEILFGELNLPGGKKTASGQWETGAATLEGLAETHALPRVLLDWRQ 694 Query: 633 LAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQA 692 L+KLK TYTD L ++P+T RVHTSY A TGRL+S+DPNLQNIP+R E GR+IRQA Sbjct: 695 LSKLKGTYTDALVAAMDPQTDRVHTSYQLAAATTGRLASSDPNLQNIPIRTETGRQIRQA 754 Query: 693 FIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSE 752 FIA + +V++SADYSQIELR++AH+ L AF G DIH ATA+E+FG+P+ + E Sbjct: 755 FIAKDGHVLISADYSQIELRLLAHIGDIPELKRAFKAGIDIHTATASEMFGVPVADMDPE 814 Query: 753 QRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQ 812 RR AKAINFG++YG+SAFGLA QL I + EA Y+ YFER+PG+ YM+ TRA+ + Sbjct: 815 TRRRAKAINFGIVYGISAFGLANQLGIDQGEAGAYIKTYFERFPGIRTYMDATRAEVRSL 874 Query: 813 GYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQP 872 G+V T+ GR++++P I S +GA R ERAAINAP+QG AADII+RAMI + L+A Sbjct: 875 GFVSTVFGRKIHIPAIASKSGAERQFGERAAINAPIQGAAADIIRRAMIRMPGALEAAGL 934 Query: 873 RVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTR----LDVPLLVEVGSGENWDQAH 928 +M++QVHDELVFE + +V+A I ++ME L VPL+V+ + +NWD+AH Sbjct: 935 ETKMLLQVHDELVFEAPEAEVEAAIPLIKRIMEGAAEPAVALSVPLVVDARAAKNWDEAH 994 >UniRef50_Q9S1G2 DNA polymerase I n=25 Tax=Rhizobiales RepID=DPO1_RHILE Length = 1016 Score = 1021 bits (2639), Expect = 0.0, Method: Composition-based stats. Identities = 435/1003 (43%), Positives = 588/1003 (58%), Gaps = 89/1003 (8%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNS-AGEPTGAMYGVLNMLRSLIMQYK-------PTHA 58 + L LVDGS +++RA+HA PPLT G P GA+ G NML L+ + PTH Sbjct: 22 DHLFLVDGSGFIFRAFHALPPLTRKTDGLPIGAVSGFCNMLWKLLRDARNTDVGVTPTHL 81 Query: 59 AVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVI 118 AV+FD KTFR +L++ YK++R P++L Q + +A LP + G EADD+I Sbjct: 82 AVIFDYSAKTFRKDLYDAYKANRSAPPEELIPQFGLIREATRAFNLPCIETEGFEADDII 141 Query: 119 GTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIID 178 T AR+AE G V I + DKD+ QLV+PN+ + ++M + +G +V+ K+GVPPE +ID Sbjct: 142 ATYARQAEATGADVTIVSSDKDLMQLVSPNVHMYDSMKDKQIGIPDVIEKWGVPPEKMID 201 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 A+ GDS DN+PG+PG+G KTA LL+ G LDTL +I + + Sbjct: 202 LQAMTGDSVDNVPGIPGIGPKTAAQLLEEYGDLDTLLERATEIKQV------KRRETILA 255 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 N ++A LS L ++TDV L+L + L ++ +L+G K EF T V Sbjct: 256 NIDMARLSRDLVRLRTDVPLDLDLDALVLEPQNGPKLIGFLKTMEFTTLTRRVAEACDCD 315 Query: 299 AKGAKPAAKPQETSVADEAPEVTAT----------------------------------- 323 A +PA E P++ A Sbjct: 316 ASAIEPAIVRIEWGETARGPDLDAAEPEPVAGGIPEVSGESVPMPPRAKAKSAVEGAFSP 375 Query: 324 --------------VISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLV 369 + YVTI D TL WIA + AFDTET SLD + A LV Sbjct: 376 ADLAKARAEAFATLPFDHSAYVTIRDLVTLDRWIADARATGLVAFDTETTSLDAMQAELV 435 Query: 370 GLSFAIEPG---------VAAYIPVAHD--------YLDAPDQISRERALELLKPLLEDE 412 G S AI AAY+P+ H A +QI AL LK LLEDE Sbjct: 436 GFSLAIADNTADPTGTKIRAAYVPLVHKNGVGDLLGGGLADNQIPMRDALPRLKALLEDE 495 Query: 413 KALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTIT 472 LKV QNLKYD +L YGIE R DTML SY+L++ G H MD L+E++L H I Sbjct: 496 SVLKVAQNLKYDYLLLKRYGIETRS-FDDTMLISYVLDAGTGAHGMDPLSEKFLGHTPIP 554 Query: 473 FEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMP 532 ++++AG GK +TF+ + ++ A YAAEDADVTL+L L + P L G +V+E +E P Sbjct: 555 YKDVAGSGKANVTFDLVDIDRATHYAAEDADVTLRLWLVLKPRLAAA-GLTSVYERLERP 613 Query: 533 LVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFE 592 L+PVL+R+E G+ +D ++L S EL A LE + + +AGE FN+ S KQL ILF Sbjct: 614 LLPVLARMEARGITVDRQILSRLSGELAQGAARLEDEIYVLAGERFNIGSPKQLGDILFG 673 Query: 593 KQGIKPLKKTPGGAPSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINPK 651 K G+ KT G STS +VLE+LA + LP+ I+++R + KLKSTYTD LP ++P+ Sbjct: 674 KMGLSGGSKTKTGQWSTSAQVLEDLAAAGFELPRKIVDWRQVTKLKSTYTDALPGYVHPE 733 Query: 652 TGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIEL 711 T RVHTSY A T TGRLSS++PNLQNIPVR EGR+IR AFI+ + ++SADYSQIEL Sbjct: 734 TKRVHTSYSLASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPGHKLISADYSQIEL 793 Query: 712 RIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAF 771 R++AH++ L AF +G DIH TA+E+FG+P+E + E RR AKAINFG+IYG+SAF Sbjct: 794 RVLAHVAEIPQLTKAFEDGVDIHAMTASEMFGVPVEGMPGEVRRRAKAINFGIIYGISAF 853 Query: 772 GLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSS 831 GLA QL+I R EA Y+ YFER+PG+ +YME +A A+++GYVET+ GRR+ P+I+SS Sbjct: 854 GLANQLSIERSEAGDYIKKYFERFPGIRDYMESRKAMARDKGYVETIFGRRINYPEIRSS 913 Query: 832 NGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQP--RVRMIMQVHDELVFEVH 889 N + RA ERAAINAP+QG+AAD+I+RAMI ++ L RVRM++QVHDEL+FEV Sbjct: 914 NPSVRAFNERAAINAPIQGSAADVIRRAMIKIEPALVEVGLADRVRMLLQVHDELIFEVE 973 Query: 890 KDDVDAVAKQIHQLMEN----CTRLDVPLLVEVGSGENWDQAH 928 DV+ I +MEN + VPL V+ + NWD+AH Sbjct: 974 DQDVEKAMPVIVSVMENATMPALEMRVPLRVDARAATNWDEAH 1016 >UniRef50_Q2LQV1 DNA polymerase I n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LQV1_SYNAS Length = 901 Score = 1018 bits (2632), Expect = 0.0, Method: Composition-based stats. Identities = 375/925 (40%), Positives = 544/925 (58%), Gaps = 38/925 (4%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 ++ + LVDGS+YLYRA++A L+NS G PT A+YG NML L+ + KP + A+ FD K Sbjct: 12 KSTIYLVDGSNYLYRAFYAIRELSNSRGLPTNAVYGFTNMLIKLLRERKPEYIAITFDLK 71 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 G TFR E + YK+ R P+ L QI + +++ +P+L G EADD+IGTLA Sbjct: 72 GPTFRHETYAQYKATRKATPEALIPQIPYIKDIIRGFSIPILEQQGTEADDIIGTLACRF 131 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185 G V+I +GDKDM QL++P++ +I+TM + V ++GV PE + + L L GD Sbjct: 132 AGEGLKVIIVSGDKDMLQLLSPDVIMIDTMNDRTYDVAAVRERFGVDPEKVPEILGLTGD 191 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 SDNIPG+PG+G K A L++ G ++ + E++ + + E A L Sbjct: 192 MSDNIPGIPGIGPKGALRLVEEYGSIEEILRNVERL------RNPKLRDSVRVYGEQALL 245 Query: 246 SYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPA 305 S LA I+T + L E+ +Q+P E L LF++ EF + + Sbjct: 246 SRDLARIRTGIPLTFDLEEARLQEPDREVLTRLFRELEFSSLLQEFSVVEDCGDNSHT-- 303 Query: 306 AKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNIS 365 + E + A++ L++ + S + + Sbjct: 304 --------------------------LLRTPEAVAAFMEPLKEGGFLVLEMVLSSSEPMR 337 Query: 366 ANLVGLSFAIEPGVAAYIPVAHDYLD-APDQISRERALELLKPLLEDEKALKVGQNLKYD 424 A L+G++ ++ G A YIP+ + + +S E+ +L P L D+K VG +LK Sbjct: 338 AELIGVALGLDSGNAGYIPLEPGAAEKSASSLSEEQVFPVLFPFLADKKIALVGHDLKTV 397 Query: 425 RGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITF-EEIAGKGKNQ 483 +L+ G++++ DTM+ +YILN +++ + + +L + +++ G + Sbjct: 398 LIVLSQKGVKVQNPLLDTMVAAYILNPARRGYELSEIVQDYLHRQVEPLRKKLVGGSSPK 457 Query: 484 LTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERN 543 + E +A + +L + +++ G +F+++EMPLV VL+ +E Sbjct: 458 QSPASFPPERLRDFACRRVEAIGELASTLIEKMEET-GLRELFDSVEMPLVAVLAAMEEK 516 Query: 544 GVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTP 603 GV +D +L S+EL L+ E K + +AGE FN++S KQLQTILFEK + KKT Sbjct: 517 GVLLDLHLLKEMSQELGHLLSLSEAKIYALAGERFNIASPKQLQTILFEKLNLPKGKKTK 576 Query: 604 GGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAV 663 GG ST EVL LAL++ LP IL YR +AKLKSTY D LP +IN +TGR+HTSY+Q V Sbjct: 577 GG-YSTDVEVLSNLALNHELPAEILAYRSMAKLKSTYIDALPSLINIRTGRIHTSYNQTV 635 Query: 664 TATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGL 723 ATGRLSS++PNLQNIP+R EG+RIRQAFIAP + IVSADYSQIELR++AHLS D L Sbjct: 636 AATGRLSSSNPNLQNIPIRTLEGKRIRQAFIAPPGWAIVSADYSQIELRVLAHLSEDPVL 695 Query: 724 LTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKE 783 + AFA G+DIH TAA+VFG+ E + +E RR AK INFG++YGMSAFGL+R+L IP+K+ Sbjct: 696 INAFAAGEDIHSRTAADVFGVFPEMINAEMRRQAKVINFGVLYGMSAFGLSRELGIPQKQ 755 Query: 784 AQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAA 843 AQ Y+D YF++Y V Y++ QA+E+GYV TL RR YLP+I S N A R AER A Sbjct: 756 AQAYIDGYFKKYESVKTYLDGILQQARERGYVTTLLNRRRYLPEINSVNPAVRQLAERMA 815 Query: 844 INAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQL 903 INAP+QGTAAD+IK AM+ + ++ + + M MQVHDELVFEV +++ A+ + Q Sbjct: 816 INAPIQGTAADLIKMAMLRIADLIREKGMKSAMTMQVHDELVFEVPQEEKIALMNLVRQE 875 Query: 904 MENCTRLDVPLLVEVGSGENWDQAH 928 ME L VPL V++ SG NWD+AH Sbjct: 876 MEGVVELKVPLKVDIASGRNWDEAH 900 >UniRef50_Q1QDQ1 DNA polymerase I n=24 Tax=cellular organisms RepID=Q1QDQ1_PSYCK Length = 988 Score = 1016 bits (2627), Expect = 0.0, Method: Composition-based stats. Identities = 452/963 (46%), Positives = 589/963 (61%), Gaps = 50/963 (5%) Query: 5 PQNPLILVDGSSYLYRAYHAFPP-LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 Q P ILVDGS YL+R YHA P + NS G T A+ G LN L L+ +Y PTH AV FD Sbjct: 37 NQPPFILVDGSYYLFRTYHALPKTMQNSQGLVTNAIRGTLNALLKLMRRYHPTHMAVCFD 96 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 K TFR + E YK++RP M +L QI +H +V A+G+PLL + G EADD+IGTLA Sbjct: 97 TKSPTFRHAMSEEYKANRPKMDIELAEQIPYIHRLVTALGIPLLRIEGAEADDIIGTLAY 156 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALM 183 A G V+ISTGDKDM QL+ + L ++ T + VV K+G+ PE +IDFL LM Sbjct: 157 RAVAEGHHVVISTGDKDMMQLINDCVILEDSFTGKMTDSAGVVEKFGINPEQMIDFLTLM 216 Query: 184 GDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVA 243 GDSSD I GVPG+G+KTA+ LL G +D + I G L + + Sbjct: 217 GDSSDGIKGVPGIGKKTAKDLLNEYGNIDNMLKNVANIKG-------RAGKNLLEYADDI 269 Query: 244 YLSYQLATIKTDVELELTCEQLEV---QQPAAEELLGLFKKYEFKRWTADVEAGKWL--- 297 ++ QLATI TD+E+ + L++ EL L+ + EF+ A ++ Sbjct: 270 PMNAQLATIVTDLEVGQDWQDLKINTDPCAHINELRELYSELEFRNELASLDHPNHPANG 329 Query: 298 ----------QAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLE 347 A+ A+ ++ + ++T + I + TILDE + L Sbjct: 330 NGHGTQSVAHSQADAESQAQIAKSLQSSTIGDITDSKIHDRAWHTILDESAFDNLVQLLA 389 Query: 348 KAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAP---DQISRERALEL 404 AP F DTET S+ A LVGLSFA++ A YIP+ H Q+ R+ L Sbjct: 390 SAPHFVIDTETTSVYWRQAELVGLSFAVQAHEAYYIPLTHALEGDELIAKQLDRDTVLAR 449 Query: 405 LKPLLEDEKALKVGQNLKYDRGILANYGIEL--------RGIAFDTMLESYILNSVAGRH 456 LKP+LE+ K+GQ+LKYD IL+ Y I L A DTML SY++N+ RH Sbjct: 450 LKPILENPNIGKIGQHLKYDAHILSLYDINLLGNIHDKPNNWAMDTMLASYVINAAITRH 509 Query: 457 DMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDL 516 MD LA +L+ +TI+FE++AGKG Q++F+Q+A++ A YA EDAD+T QL L Sbjct: 510 GMDDLARHYLQTQTISFEDVAGKGAKQVSFDQVAIDIASDYACEDADITYQLFDLFSKKL 569 Query: 517 QKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGE 576 + +E+P +L ++E NG+ I L+ S+ + LEK+A+E+AGE Sbjct: 570 ADDTNNAKLLHELEIPTAEILCQMEANGILIRRPFLNELSKRFDEEIIALEKRAYEVAGE 629 Query: 577 EFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKL 636 EFNL S KQL +LF+K G+ KKT G ST E VL ++ D+PL + LEYRGL+KL Sbjct: 630 EFNLGSPKQLGEMLFDKLGVVGGKKTKTGQYSTGEAVLSKI--DHPLVDITLEYRGLSKL 687 Query: 637 KSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP 696 KSTYTD L + + KT RVHTSYHQA+T+TGRLSSTDPNLQNIP+R GR IRQAFIAP Sbjct: 688 KSTYTDALDNVADAKTDRVHTSYHQALTSTGRLSSTDPNLQNIPIRTATGRLIRQAFIAP 747 Query: 697 EDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRS 756 E VI++ADYSQIELR+MAH S DK L AF EG DIH ATAAEV G + VT+ +RR+ Sbjct: 748 EGRVILAADYSQIELRLMAHFSGDKNLTHAFNEGLDIHAATAAEVLGKEVAEVTATERRN 807 Query: 757 AKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVE 816 AKAINFGL+YGMSAFGLA+QL + R EAQ Y+D+YFERYPGV +YM TRA A E GY+E Sbjct: 808 AKAINFGLLYGMSAFGLAKQLQMSRSEAQDYIDMYFERYPGVKDYMINTRASAYEHGYIE 867 Query: 817 TLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRM 876 T+ GR+LY PDI SN + AERAAINAP+QG+AAD+IK AMIAVD L E + +M Sbjct: 868 TILGRKLYTPDINHSNRMVKQGAERAAINAPLQGSAADLIKLAMIAVDKVLPKE--QAKM 925 Query: 877 IMQVHDELVFEVHKDDVDAVAKQIHQLMENC-----------TRLDVPLLVEVGSGENWD 925 ++QVHDELVFEV D VD +++ I M++ VPLLVE SG+NWD Sbjct: 926 LLQVHDELVFEVDADKVDEISQLITNAMQDVLTATAVEKGWNVNFAVPLLVETDSGQNWD 985 Query: 926 QAH 928 +AH Sbjct: 986 EAH 988 >UniRef50_A5EWG4 DNA polymerase I n=10 Tax=Gammaproteobacteria RepID=A5EWG4_DICNV Length = 901 Score = 1014 bits (2621), Expect = 0.0, Method: Composition-based stats. Identities = 456/930 (49%), Positives = 581/930 (62%), Gaps = 39/930 (4%) Query: 5 PQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 ++LVDGSSYL+RA++A PPLT G PTGAM+GV+ ML L Y+P + AVVFDA Sbjct: 4 SNRLVVLVDGSSYLFRAFYALPPLTTQKGHPTGAMHGVIKMLMRLYDDYQPNYFAVVFDA 63 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 GKTFR +++ YK++RPPMP+DL QI+PLH ++ A+G PL+ SGVEADDVIGTLAR+ Sbjct: 64 AGKTFRHQIYPDYKANRPPMPEDLAVQIQPLHQLITALGFPLIMESGVEADDVIGTLARQ 123 Query: 125 AEKAGRPVLISTGDKDMAQLVTP-NITLINTMTNTILGPEEVVNKYGV---PPELIIDFL 180 A V+IS+GDKDM QL+T +ITL++TM N + +V ++ + +IDFL Sbjct: 124 ALAEDYQVIISSGDKDMTQLLTHADITLLDTMKNETITASDVAKRFKIEQLTAAQVIDFL 183 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 AL+GD SDNIPGV VG KTA+ L G LD + +KI G + L Sbjct: 184 ALVGDKSDNIPGVEKVGAKTAEKWLATYGSLDAIIENADKIRG-------KVGDNLRAGL 236 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 S QLATI ++L L +L L +YE + Sbjct: 237 AQLKCSQQLATINQTLDLPYRIADLARGAENPHKLAALCAQYELNDIQNRYLKTTAV--- 293 Query: 301 GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDS 360 +Y I A KL + F FD ETDS Sbjct: 294 -------------------AAPKAPEKLHYHLIQTIAECNALCEKLAQKSAFVFDVETDS 334 Query: 361 LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN 420 L+ + A+ VG+SFA+E G A Y+P+ H + L LK L E+ K+GQ+ Sbjct: 335 LNYMQAHWVGISFAVEAGEAWYLPLVH---QNGINLPFAETLAALKNLFENASIRKIGQH 391 Query: 421 LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG 480 LK+DR ILA YGI L G+ DTML SY NS A RH+MD LA+ +L +TI FE+IAG G Sbjct: 392 LKFDRHILARYGISLNGVIDDTMLMSYCYNSTATRHNMDDLADFYLNKQTIRFEDIAGSG 451 Query: 481 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI 540 Q F++I LE A +YA EDAD+TLQL+ L ++EN+E PL +L + Sbjct: 452 AKQRRFDEIDLETAMQYACEDADITLQLYQFFQQKLASEPTLQALYENVERPLAEILWAM 511 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK 600 E GVKI L S+EL +L L+K+A+++AG FNL S KQLQ ILFE+ + + Sbjct: 512 EHQGVKIAGDKLAVQSQELAAQLKTLQKQAYQLAGGVFNLDSPKQLQEILFERLALPVIH 571 Query: 601 KTPGGAPSTSEEVLEELAL--DYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTS 658 KTP G ST+EEVL++LA LP++IL YR L KLKSTYTDKLP +I+P + RVHTS Sbjct: 572 KTPTGQASTNEEVLQKLAELRQSALPEIILNYRALGKLKSTYTDKLPELIDPDSKRVHTS 631 Query: 659 YHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLS 718 YHQAVT+TGRLSS+DPNLQNIP+R++EGRRIRQAFIA E Y I++ADYSQIELRIMAHLS Sbjct: 632 YHQAVTSTGRLSSSDPNLQNIPIRSDEGRRIRQAFIAEEGYSILAADYSQIELRIMAHLS 691 Query: 719 RDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLN 778 +D+ L AF +DIH ATAAE+F + E V QRR AKAINFGLIYGMSAFGLARQLN Sbjct: 692 QDERLQRAFQLQQDIHTATAAELFSVAPEAVDRNQRRDAKAINFGLIYGMSAFGLARQLN 751 Query: 779 IPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAA 838 I R +A +Y+D YF RYP VL YM+ R A++QGYV TL GRRLY+PDI + N RR A Sbjct: 752 ISRTQAAEYIDKYFHRYPQVLAYMDSARQTAQQQGYVSTLLGRRLYIPDIHNKNMQRRRA 811 Query: 839 AERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAK 898 AER AINAPMQG+AADIIK AM+ A++ R++MQVHDELVFEV +D Sbjct: 812 AERLAINAPMQGSAADIIKLAMVQFWQTYGAQK-ECRLLMQVHDELVFEVATAALDIWQP 870 Query: 899 QIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 +I +ME+ L VPL+V+ G ++WD AH Sbjct: 871 RITHIMEHALPLSVPLIVDCGVSKDWDGAH 900 >UniRef50_B2RLP5 DNA polymerase I n=2 Tax=Porphyromonas gingivalis RepID=B2RLP5_PORG3 Length = 926 Score = 1013 bits (2619), Expect = 0.0, Method: Composition-based stats. Identities = 386/939 (41%), Positives = 551/939 (58%), Gaps = 34/939 (3%) Query: 8 PLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 L L+D + ++RAY+AF P +S G TGA++G L ++ + P H AVVFD Sbjct: 4 RLFLLDAYALIFRAYYAFIRSPRIDSTGRDTGAVFGFALTLLDILEKESPEHIAVVFDPP 63 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 G +FR + YK+ R P+ +R + + M+ A +P + V EADD IGTLA++A Sbjct: 64 GGSFRHREYAEYKAQREETPEGIRIAVPLIKEMLAAFRIPAVEVPDFEADDTIGTLAKQA 123 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTN---TILGPEEVVNKYGVP-PELIIDFLA 181 E+ G V + T DKD QLV+ I + + GP EV K+G+ P +ID+L Sbjct: 124 EEQGLAVRMVTPDKDFGQLVSERIKIYRPKSGGGYETWGPAEVCEKFGLSIPGQMIDYLG 183 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 L+GDSSDNIPG G+G KTA+ LL G +D +YA +++ G +A K+++ +E Sbjct: 184 LVGDSSDNIPGCKGIGAKTAEKLLAEYGSIDGIYAHQDELKG-------AVAKKIQEGEE 236 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK- 300 S LATI+TD + E P + F EF+ +E+ Sbjct: 237 QTRFSRYLATIRTDAPIVFDSEAYRRTSPDMAAVRECFAALEFRTLLKRLESTPADAPAT 296 Query: 301 --------GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVF 352 +P + Y + EE + I P F Sbjct: 297 DLFAGMVQAQEPPTDLFGEGTDATGLPLKKLTDVPHEYTILETEEEIADCIRMFSSTPCF 356 Query: 353 AFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDE 412 +FDTETDS D + AN+V ++ E G A +IP+ D+ +R L+LL+PL D Sbjct: 357 SFDTETDSKDALRANIVAITLCAESGRAFFIPLP------EDEEIGKRRLDLLRPLFADT 410 Query: 413 KALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTIT 472 KVGQN+KYD +L+ YGIE+RG FDTM+ Y+L RH+MD +AE L ++TI Sbjct: 411 AIGKVGQNMKYDIQVLSRYGIEVRGQLFDTMIAHYLLFPDL-RHNMDEMAETLLGYRTIH 469 Query: 473 FEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMP 532 + ++ G K ++ Q+ L+ YA EDAD+T QL+ ++ L + G ++FE+IEMP Sbjct: 470 YSDLVGSDKQEVHIRQVPLQNLADYAMEDADITWQLYERLNAMLSEA-GMTSLFESIEMP 528 Query: 533 LVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFE 592 LVPVL +ER+GVK+D +VL + L + +E + + +AG FN++S Q+ T+LFE Sbjct: 529 LVPVLVDMERSGVKLDTEVLRRTASRLGEEMQRIEDEIYRLAGHSFNINSPSQVGTVLFE 588 Query: 593 KQG-IKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPK 651 + + KKT G+ ST+EE+L +L +P+ ++IL+YRG+ KL STY + LP M P Sbjct: 589 ELQITEKPKKTKSGSYSTNEEILVKLQEKHPIVRLILDYRGIKKLLSTYVEALPEMRYP- 647 Query: 652 TGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPED-YVIVSADYSQIE 710 G++HTS++Q V TGRLSS++PNLQNIP+R E GR +R AF+ D + +SADYSQIE Sbjct: 648 DGKLHTSFNQTVATTGRLSSSNPNLQNIPIRTEVGRGLRAAFVPDNDECIFMSADYSQIE 707 Query: 711 LRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSA 770 LR+MAHLS D+ L+ AF G+DIHRATA++++ LPL VT + RR AK NFG+IYG+SA Sbjct: 708 LRLMAHLSEDESLIQAFLHGEDIHRATASKIYRLPLVEVTDDMRRRAKTANFGIIYGISA 767 Query: 771 FGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKS 830 FGL+ +LNI R EA+ ++ YF YPGV YM+R+ A+AK QGYV TL GR+ +L DI S Sbjct: 768 FGLSERLNISRTEAKALIEGYFASYPGVKAYMDRSIAEAKRQGYVTTLFGRKRFLRDINS 827 Query: 831 SNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHK 890 +N R AER AINAP+QG+AAD+IK AMI + + + R RMI+QVHDEL F V + Sbjct: 828 ANAVVRGYAERNAINAPIQGSAADLIKLAMIRIHEEITERKLRSRMILQVHDELNFNVLR 887 Query: 891 DDVDAVAKQIHQLMENCTR-LDVPLLVEVGSGENWDQAH 928 + V + + ME L VPL+ E+G G NW +AH Sbjct: 888 PEAAEVRELVRSCMEGVMPSLRVPLIAEIGEGANWLEAH 926 >UniRef50_Q1PUU8 Stongly similair to DNA polymerase I n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PUU8_9BACT Length = 887 Score = 1012 bits (2618), Expect = 0.0, Method: Composition-based stats. Identities = 358/926 (38%), Positives = 546/926 (58%), Gaps = 41/926 (4%) Query: 4 IPQNPLILVDGSSYLYRAYHAF-PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 +P+ ++DG S+ Y+A++A LT G P A+YG ML L+ + +P + A+VF Sbjct: 1 MPE-RFFIIDGHSHCYQAFYAITAKLTTPDGTPANAVYGFTRMLLKLLREQRPDYLALVF 59 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 D K T R + + YK+ R P+DL+ QI ++ +V+A G+P+ A G EADDVIG+L Sbjct: 60 DTKYTTNRHQKYSDYKATRKETPEDLQVQIPLIYKVVRAFGIPVYAAKGYEADDVIGSLV 119 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLAL 182 EK V+I T DKD+ QL+ P + +++ I+ + + + G+ P ++D LAL Sbjct: 120 TVLEKKEIEVVIVTSDKDLEQLIGPKVKILHAKKGEIIDSDVLFTQKGIMPNQVVDVLAL 179 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 GD SDNIPGVPG+G KTA L++ G L+++ A I+G K L + Sbjct: 180 AGDVSDNIPGVPGIGNKTALDLIKKWGSLESVLANVGHISG------KKRQENLRTFADQ 233 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A S +L + D+ L + E + +L LF+ + F +D+ A + Sbjct: 234 ARFSRELLDLYNDIPLTVDMESCRLSTGENIKLRKLFRSFGFNTLLSDMVATANTE---- 289 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 +Y I E ++ ++ K FA D ET D Sbjct: 290 ------------------------ATHYYLINTIEQFHGFLEQISKKDAFAIDLETTGTD 325 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 + A++VGLSF+ E A Y+P+ + ++ + L ++ +LEDE K+GQN+K Sbjct: 326 PLKAHIVGLSFSWEQKEAYYVPL--MAPENTRHLTADIVLPEIRKVLEDESKKKIGQNIK 383 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 YD +L + I L+GI FD+M+ SY+LN H++D +A +L +KTI E+ G GK Sbjct: 384 YDLLVLKKHNIGLKGIYFDSMIASYLLNPAKRNHNLDDIAFEYLSYKTIMIAELIGSGKQ 443 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 Q+T +++ +++ +YA +DAD+T +L M P L+K G +F+ IE+PL+ VL+ +E Sbjct: 444 QITMDKVPVDKVCQYACQDADITFRLAETMAPLLKKE-GLWQLFQEIEIPLIYVLAEMEG 502 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 NG+ I+ L S +L +L LEK+ + +A +EFN+SS KQL ILF+K + L++T Sbjct: 503 NGICINADFLRQMSGDLAAQLQCLEKEIYRVAEQEFNISSHKQLGAILFDKFQLPKLRRT 562 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST VL LA +PLPK+ LEYR LAKLKSTY D LP ++N TG++HT+++Q Sbjct: 563 KTGV-STDANVLASLAWRHPLPKLALEYRQLAKLKSTYADALPNLLNQDTGKIHTTFNQT 621 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQIELRIMAHLSRDK 721 VT+TGRLSS++PNLQNIPV+ + G++IR+AFI ++ V +SADYSQIELRI+AH S D Sbjct: 622 VTSTGRLSSSNPNLQNIPVKTDIGKQIRRAFIPSGKNAVFLSADYSQIELRILAHFSEDT 681 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 L+ AF E DIH A A+ ++ +PLE VT+E RR+AKAINFG+IYG++ +GL+R + Sbjct: 682 ALMEAFREDLDIHAAVASSIYHVPLENVTTEMRRNAKAINFGIIYGLNEYGLSRDTGLSL 741 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 +A+ ++D YF Y GV E+ ++ +AKE GYV+TL R+ +PDI + N R AER Sbjct: 742 NDAKDFIDAYFTLYQGVREFRDKVVEEAKEMGYVKTLFNRKRAIPDINAKNKRFRNLAER 801 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 AIN +QG+AAD+IK AM + + L+ RM++Q+HDEL+FEV ++ + Sbjct: 802 IAINTIIQGSAADLIKVAMNNIYSKLKCGDYEARMLLQIHDELLFEVGVQALEQTRIMVQ 861 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQA 927 + M + L VP+ V + +G+NW + Sbjct: 862 EEMGHAVTLRVPVKVNIKTGKNWMET 887 >UniRef50_A6TSU6 DNA polymerase I n=13 Tax=Clostridiaceae RepID=A6TSU6_ALKMQ Length = 897 Score = 1011 bits (2613), Expect = 0.0, Method: Composition-based stats. Identities = 350/928 (37%), Positives = 548/928 (59%), Gaps = 36/928 (3%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + ++++DG+S + RA++A PPLTN G+ T A+YG + ML ++ Y P + +V FD Sbjct: 1 MNLKRMVIIDGNSLINRAFYALPPLTNKEGQHTNAIYGFMTMLLKVMDDYDPQYISVAFD 60 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 K TFR + FE YK+ R MP +L Q+EPL ++ A + + + G EADD+IGTL++ Sbjct: 61 RKAPTFRHKSFEGYKAGRKKMPPELAEQLEPLKEVLDAFHIYRVEIDGFEADDLIGTLSK 120 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDF 179 AE+ LI TGDKD QL + + ++ T I P++++ +Y V PE ID Sbjct: 121 YAEEQDIECLIVTGDKDALQLASEKVKILFTKKGISSLEIYDPQKIMEQYEVTPEQFIDL 180 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 LMGD+SDNIPG+PGVGEKTA LL+ G ++ L +I+ A+ + K+E N Sbjct: 181 KGLMGDNSDNIPGIPGVGEKTAIKLLKQFGTVENLIQNAGEIS------AQKLREKVENN 234 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 E A +S +LATI T+V +E+ E+L+ E++L LFKK+EF V A K Sbjct: 235 TEQAMMSKRLATIMTNVPVEIELEKLKKIAIDEEKVLALFKKFEFNTLIGRVIARKEEVD 294 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 + +A I + + LK ++ T+T+ Sbjct: 295 GEVVVKQEKMTNEIAQ-----------------ITNIDELKKAFDEVRAGKQMILQTKTE 337 Query: 360 SLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQ 419 + + +++ ++F++ YI V D +E L +K +LEDE+ K+G Sbjct: 338 EENIVLDHILAITFSVNGEKLYYIDV-------RDFSDKEALLIQIKEVLEDEEIHKIGH 390 Query: 420 NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 ++K++ + IE++ + FDTM+ Y+++ + + LA +++ + ++ EE+ GK Sbjct: 391 DIKHEIRHFYVHDIEMKNVTFDTMIGEYLIDPAKSSYALKDLAAQYIGQEVMSEEELRGK 450 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 GKN ++ + E+ +Y + V +++ ++ +Q+ + ++ +E+PLV VL+ Sbjct: 451 GKNLISIGEAPKEDLMKYLCQRVSVIGKIYPEIKAKMQELE-LEKLYYEVELPLVEVLAA 509 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 +E G+K+D +L E ++ L K HE+A FN++S KQL +LFEK + P+ Sbjct: 510 MEYKGIKVDRSMLEILEIEFGEQIDLLTKAIHELAETNFNINSPKQLGEVLFEKLELPPI 569 Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 KKT G ST+ EVLE+L + + ILEYR + KLKSTY D L +INP+TGR+H+++ Sbjct: 570 KKTKTG-YSTNAEVLEKLQDQHDIIPKILEYRQVTKLKSTYVDGLLNIINPETGRIHSNF 628 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSR 719 +Q VT TGR+SST+PNLQNIP++ E GRR+R+ F+A E++ + ADYSQ+ELR++AH+ Sbjct: 629 NQTVTTTGRISSTEPNLQNIPIKLEMGRRLRKVFVANENHQFIDADYSQVELRVLAHICE 688 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 D+ LL AF + +DIH TAAE+F +P+E VT R SAKA+NFG++YG+S +GL++ LNI Sbjct: 689 DENLLDAFLKNQDIHTRTAAEIFDVPMEEVTDSMRSSAKAVNFGIVYGISDYGLSQNLNI 748 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 R +A+KY+D Y ++YP V YM+ QA +QGYV TL RR YLP++KS N R+ Sbjct: 749 TRVKAKKYIDNYLDKYPSVKRYMDEIVEQAHQQGYVVTLFNRRRYLPELKSRNFNIRSFG 808 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 ER A+N P+QG+AADIIK AM+ V L+ + ++I+QVHDEL+ E ++V+ K Sbjct: 809 ERMAMNTPIQGSAADIIKIAMVNVYRRLKEQGLTSKLILQVHDELIVEAPDNEVEVAIKI 868 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWDQA 927 + + ME L V L V++ NW A Sbjct: 869 VRESMEEAMNLKVQLKVDLAYANNWYDA 896 >UniRef50_Q1NVM3 DNA polymerase A n=2 Tax=Deltaproteobacteria RepID=Q1NVM3_9DELT Length = 910 Score = 1010 bits (2611), Expect = 0.0, Method: Composition-based stats. Identities = 384/940 (40%), Positives = 535/940 (56%), Gaps = 53/940 (5%) Query: 5 PQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 P+ L+DGS+Y++RAYHA PLTN G PT A+YG L +I + + H AVVFDA Sbjct: 3 KPPPVYLIDGSAYIHRAYHAITPLTNRDGLPTHAIYGFTTTLLRVIREGEARHLAVVFDA 62 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 +G FR +L+ YK++RP MP+DL Q+ + +V A + L G EADD+I R Sbjct: 63 RGPNFRHQLYPQYKANRPAMPEDLACQLPYIKEIVAAYRITSLEREGFEADDLIAAAGRR 122 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMG 184 AG V+I +GDKD+ QLV PNIT + M + +L V KY +PP ++D+ AL+G Sbjct: 123 LAAAGHRVVIVSGDKDLLQLVGPNITFWDPMGDRLLDAAAVEAKYQLPPAKLLDYFALIG 182 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 DSSDNIPGVPGVG KTA L++ G LD L A E+++ A + KL +++ A Sbjct: 183 DSSDNIPGVPGVGPKTAVKLIKEFGDLDQLLANLEQVS------APKLRQKLADHRDAAL 236 Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304 L+ +L +K D+E+ T E+ +P +L LF + +F R Sbjct: 237 LARELIRLKDDLEIPATPEEYRQPEPDRGKLRQLFSQLDFSRLL---------------- 280 Query: 305 AAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNI 364 E A + + + E L +L A DTET SL+ + Sbjct: 281 ------------QSEAAAEELDDSAFQLLTTTEQLPTVCEELRAAGGLVIDTETTSLNAL 328 Query: 365 SANLVGLSFA--------------IEPGVAAYIPVAHDYLD---APDQISRERALELLKP 407 A LVG+S P A Y+P+ H D AP Q+ + L P Sbjct: 329 RAELVGISLCPLPAAATAADNSQPTPPPTAWYLPIGHRLADGSPAPGQLPLAAVQQQLAP 388 Query: 408 LLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLK 467 LL D + LK+G NLKYD +L ++G+EL D+M+ SY+++ H +D L+ L+ Sbjct: 389 LLGDPQLLKLGHNLKYDLQVLKSHGLELAAPLADSMIASYLIDPGRRSHKLDDLSSELLE 448 Query: 468 HKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFE 527 + +F E++ + F + A RY+ +D + L P LQ+ G ++ Sbjct: 449 RQLTSFAEVSAGDRRPEAFAYVEPAAACRYSCQDVVASRLLWELFAPQLQQL-GLDSLLH 507 Query: 528 NIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQ 587 +EM L+P+L+R+ER G+ +DP VL E LA LE K E+AGE FN++S +QL Sbjct: 508 EVEMALLPILARMERLGILVDPAVLDELEREFGRELARLESKIAELAGESFNINSPRQLG 567 Query: 588 TILFEKQGIKPLKKTPGGA-PSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPL 646 +L+E+ + +KT G ST LE LA + LP ++ +R L+KLKSTY DKL Sbjct: 568 EVLYERLKLPHGRKTKGKTGYSTDYRELERLAAYHDLPAAVISHRNLSKLKSTYVDKLAT 627 Query: 647 MINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADY 706 +I+P GRVHT+++Q VTATGRLSS++PNLQNIP+R EGRR+R AF+A ++ ++ADY Sbjct: 628 LIDPADGRVHTTFNQTVTATGRLSSSNPNLQNIPIRTPEGRRLRAAFVAAAGHLFLAADY 687 Query: 707 SQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIY 766 SQI+LR++AH S D L AFA +DIH TAAE+F + V+++ RR AK INFG++Y Sbjct: 688 SQIDLRVLAHYSGDPVLQEAFAHDQDIHARTAAEIFRVNQGLVSADMRRVAKTINFGIVY 747 Query: 767 GMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLP 826 GMSAFGLA QL RKEAQ ++D YFE Y GVL +M+ QA+ G+V TL RR LP Sbjct: 748 GMSAFGLAEQLRCSRKEAQTFIDRYFELYQGVLRFMQEIVEQARRDGWVGTLLNRRRPLP 807 Query: 827 DIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVF 886 +I S N RR AER AIN P+QGTAADIIK A IA D L+ R ++Q+HDEL+F Sbjct: 808 EINSGNKMRREFAERTAINTPIQGTAADIIKLAAIACDRALREAGCRSEALLQIHDELIF 867 Query: 887 EVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 EV +D++ V I Q ME L VPL V + SG N + Sbjct: 868 EVPQDELAQVGPLIRQAMEEVMELAVPLTVNLKSGPNLSE 907 >UniRef50_A5WH47 DNA polymerase I n=4 Tax=Bacteria RepID=A5WH47_PSYWF Length = 1022 Score = 1008 bits (2606), Expect = 0.0, Method: Composition-based stats. Identities = 434/983 (44%), Positives = 577/983 (58%), Gaps = 71/983 (7%) Query: 6 QNPLILVDGSSYLYRAYHAFPP-LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 Q P +LVDGS YL+R YHA P + + G T A+ G LN L ++ +Y PTH AV FD Sbjct: 51 QPPFVLVDGSYYLFRTYHALPKTMMTTQGLTTNAIRGTLNALLKVMRRYHPTHMAVCFDT 110 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 K TFR + E YK++RP M +L QI +H +V+A+G+PLL + G EADD+IGTL Sbjct: 111 KSPTFRHTMSEEYKANRPKMDPELAEQIPYIHRLVRALGIPLLRIEGAEADDIIGTLTHR 170 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMG 184 A + G V+ISTGDKDM QLV + L ++ ++ V K+G+ P IID L LMG Sbjct: 171 AIEEGHHVVISTGDKDMMQLVNDCVILEDSFAGKVVDVPAVEEKFGIKPNQIIDLLTLMG 230 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 D+SD I G+P VG+KTA L +D + A I G + KL + + Sbjct: 231 DASDGIKGIPSVGQKTAVKWLNQYQTVDNILANAHNIKG-------KVGEKLVEFVDNIP 283 Query: 245 LSYQLATIKTDVELELTCEQLEV---QQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 QLATI T++++ E L + EL L+ + EFK A ++ Sbjct: 284 RDRQLATIVTNLDIGQDWEDLRINTDSSTFVAELRDLYSELEFKNELASLDHPNHPANSS 343 Query: 302 AKPAA--------------KPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLE 347 A Q + + + + TILDE + KL+ Sbjct: 344 VHSVADSKADAESQAQVAKTLQHQKQSSIIEHIKNSNTHDKAWHTILDESAFDNLLNKLQ 403 Query: 348 KAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPD------------- 394 AP FA DTET S++ A +VGLSF+++ A Y+P+AH + P Sbjct: 404 AAPYFAVDTETTSINWREAQIVGLSFSVQAHEAYYLPLAHVDYNEPQKKAKNKKEEAEQA 463 Query: 395 --------------QISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIEL----R 436 Q+ R+ L LKP+LE+ K+GQ+LKYD +L+ YGIEL + Sbjct: 464 KLLANATVDPLIAKQLDRDTVLAKLKPILENPNIGKIGQHLKYDAHVLSKYGIELNMSPK 523 Query: 437 GIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGR 496 DTML SY+LN+ A RH MD LA +L +TI+FE++AGKG Q+TF+++A+ A Sbjct: 524 NWEMDTMLASYVLNAAATRHSMDDLARHYLHTQTISFEDVAGKGAKQVTFDKVAINIASD 583 Query: 497 YAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHS 556 YA EDAD+T QL L+ + +E+P+ +L ++E G+ I L+ S Sbjct: 584 YACEDADITYQLFELFQDKLKDDAVNQRLLHELEIPVAQILCQMESEGIMIKRSFLNELS 643 Query: 557 EELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEE 616 E + LEK+A+ AGE FNL S KQL +LF+K G+ KKT G ST E VL + Sbjct: 644 ERFDEEIVALEKQAYIEAGEAFNLGSPKQLGEMLFDKLGVIGGKKTKSGQYSTGEAVLSK 703 Query: 617 LALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNL 676 + ++PL ++ LEYR LAKLK+TYTD L + + T RVHTSYHQA+T+TGRLSSTDPNL Sbjct: 704 I--EHPLAEIALEYRSLAKLKNTYTDALDAVADNDTDRVHTSYHQALTSTGRLSSTDPNL 761 Query: 677 QNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRA 736 QNIP+R + GR IRQAFIAP+ V+++ADYSQIELR+MAH S D L AF EG DIH A Sbjct: 762 QNIPIRTKTGRLIRQAFIAPKGRVLLAADYSQIELRLMAHFSGDDNLTRAFNEGLDIHSA 821 Query: 737 TAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYP 796 TAAEV G ++ VT +RR+AKAINFGL+YGMSAFGLA+Q+ + R EAQ Y++ YF RYP Sbjct: 822 TAAEVLGKSVDDVTPTERRNAKAINFGLLYGMSAFGLAKQIQMGRSEAQDYINQYFARYP 881 Query: 797 GVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADII 856 GV YM+ TR A + GY+ET+ GR+LY PDI+ SN R AERAAINAP+QG+AAD+I Sbjct: 882 GVQRYMQETRNSAVDNGYIETILGRKLYTPDIQHSNQMVRRGAERAAINAPLQGSAADLI 941 Query: 857 KRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENC--------- 907 K AMIAVD L + +M++QVHDELVFEV D VD +AK I M+N Sbjct: 942 KLAMIAVDNVLPKQ--NAKMLLQVHDELVFEVDADKVDHIAKLIKNAMQNVLSDTAKQMG 999 Query: 908 --TRLDVPLLVEVGSGENWDQAH 928 VPLLVE G G+NWD+AH Sbjct: 1000 WDVDFAVPLLVETGVGDNWDEAH 1022 >UniRef50_Q6X9S0 DNA polymerase I n=3 Tax=Bacillales RepID=Q6X9S0_9BACL Length = 903 Score = 1007 bits (2603), Expect = 0.0, Method: Composition-based stats. Identities = 354/926 (38%), Positives = 510/926 (55%), Gaps = 30/926 (3%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 LILVDG+S RA++A L+ G T A+YG NML LI + +PTH V FDA Sbjct: 2 RKLILVDGNSVANRAFYAVRLLSTRGGLHTNAVYGFANMLLKLIEEERPTHFLVAFDAGK 61 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 TFR +E YK+ R P +L Q + +V+A G+ + EADD+IGTLA+ AE Sbjct: 62 ATFRHREYEAYKAGRLQTPPELSEQFPYIRELVRAFGVASGELEEYEADDMIGTLAKRAE 121 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLAL 182 G L+ TGD+D+ QLV+ +T+ T P + +YG P+ I D L Sbjct: 122 AEGVDTLVVTGDRDLLQLVSDRVTVALTRKGITETERYDPARIREEYGFDPDRIRDLKGL 181 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 MGD+SDN+PGVPGVGEKTA LL+ G L+++ +IAG + L + + Sbjct: 182 MGDASDNLPGVPGVGEKTALKLLRQYGSLESVLEHASEIAG-------KLGENLRAHADA 234 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A LS +LATI V L+ + L + +P L L ++ EFK + A Sbjct: 235 ARLSKRLATIDCAVPLQSGWDWLRLGEPDRAALASLLRQLEFKSLLKRL-GLDGTSADAD 293 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 + ++ P A + E ++ +++LE A E + Sbjct: 294 VDGVRSSARPADEKRPRAVAVAEEGVDVRCPDRPEEVEEALSRLEAAQSVV--VEVTGDN 351 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 + G+++ + A +IP + + L L D + K + Sbjct: 352 PHDGEVRGVAW-WDGHTAYFIPFERL---------VQSDMRPLADWLADARRPKRTHDSH 401 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 L +G+ RG +F T + +Y+L+ RH + L+ R+ E++ GKG Sbjct: 402 RAEVALFWHGLAFRGTSFCTHIAAYLLDPTESRHTLADLSRRYGLPPVPEAEDVYGKGAK 461 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 F + RY A + +L + DL G ++F ++E+PL L+ +E Sbjct: 462 ---FKVPDRDTLARYVGRKAALVARLVPLLEADLAAC-GMRSLFYDLELPLSSELAVMET 517 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 GV++D L + EEL A++E++ +E+AG FN+ STKQL ILF+K G+ +KKT Sbjct: 518 VGVRVDAAALAAYGEELREAAAKVEREIYELAGTTFNIGSTKQLGEILFDKLGLPVVKKT 577 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST +VLEELA +P+ + IL YR L KL+STY + L I P+TG++HT Y Q Sbjct: 578 KTG-YSTDADVLEELAPYHPIVEKILHYRQLTKLQSTYIEGLLKEIRPQTGKIHTYYQQT 636 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIELRIMAHLSRDK 721 + ATGRLSS PNLQNIP+R EEGR+IR+AF+ +++++ADYSQIELR++AH+S D+ Sbjct: 637 IAATGRLSSQFPNLQNIPIRLEEGRKIRKAFVPSEPGWLMLAADYSQIELRVLAHVSGDE 696 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 L AF G DIH TA +VFG+ + V + RR AKA+NFG+IYG+S FGLA+ LNI R Sbjct: 697 RLKEAFRTGMDIHTKTAMDVFGVSEDRVDARMRRQAKAVNFGIIYGISDFGLAQNLNISR 756 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 KEA +++ YF + GV Y ER QA+ GYV TL GRR YLPDI +SN R+ AER Sbjct: 757 KEAAEFIRQYFAVFSGVKAYRERIVEQARRDGYVTTLLGRRRYLPDINASNYNLRSFAER 816 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 A+N P+QGTAADIIK AM+ + ++ + RM++QVHDELVFEV D++DA+ + + Sbjct: 817 TAMNTPIQGTAADIIKTAMVRLTRRMRDVGLKSRMLLQVHDELVFEVPPDELDAMRELVT 876 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQA 927 +ME+ LDVPL V+V G +W A Sbjct: 877 DVMESAVPLDVPLKVDVSWGADWYAA 902 >UniRef50_Q7UI29 DNA polymerase I n=1 Tax=Rhodopirellula baltica RepID=Q7UI29_RHOBA Length = 1027 Score = 1006 bits (2601), Expect = 0.0, Method: Composition-based stats. Identities = 356/933 (38%), Positives = 532/933 (57%), Gaps = 35/933 (3%) Query: 2 VQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 + +++VD S +Y+ +HA PP+T++ G P A+YG + + L+ + P + Sbjct: 123 PDLTDKLVVVVDAHSLIYQVFHALPPMTSTGGLPVSAVYGFVGDMLELLSRKNPDYLIAA 182 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 FD TFR+EL+ YK++R MPD+LR QI + + AMG+ ++ SG EADD++ T+ Sbjct: 183 FDKSEVTFRNELYPEYKANRDSMPDELRQQIPLIRQAIDAMGIGIIEQSGFEADDLLATV 242 Query: 122 AREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLA 181 A + E+AG L+ T DKD QL++ + N + + E+ +G+ P+ ++D+ A Sbjct: 243 AAKVEEAGGRCLVVTSDKDCRQLISDQTKIYNIRKDQEIDAAELFGLWGIRPDQVVDYQA 302 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 L+GD DN+PG+ +G K AQ LL+ L+ + E I+G K L +E Sbjct: 303 LVGDPVDNVPGISLIGPKIAQQLLETHDTLEEILNNAESISG------KKRKENLMNGRE 356 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 A +S +L +K DVE + + E + L +++ F+R + + Sbjct: 357 AAMMSRELVELKRDVESPIPWNRCVRSAADLERVDALLQEFGFRRLRSRAAELLGGE--- 413 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 AP Y TI +E LKA +L K V A DTET S Sbjct: 414 ---------------APVEEPKPAWESRYQTITNESELKALAVELAKQTVLAIDTETTST 458 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 +LVG+S A +PG AAYIPV D I+ +E+L+ +LE KVG NL Sbjct: 459 HARGCDLVGISIAWQPGEAAYIPV--RAPDGDPAINELIVIEILRDVLESSAIEKVGHNL 516 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 K+D +L + G++L GI DTM+ Y+LNS H +D LA+R L H ++ +++ G GK Sbjct: 517 KFDVIVLRSAGVQLGGITMDTMVADYLLNSGGRNHGLDDLAQRRLDHTNLSIKDLIGTGK 576 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 Q+T +Q+ +++ YA ED DV ++L + +L + G +F+ +EMPL VL+ +E Sbjct: 577 KQITMDQVPVDDVSPYACEDVDVPIRLAPTLRDELNES-GLDGLFDEVEMPLTEVLAEME 635 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 NG+ ++ L SE +A+L AG EFNL S KQL +LFE+ G+ +KK Sbjct: 636 FNGIHVNADTLAKMSERFDKDIADLRALVFSAAGHEFNLDSPKQLGVVLFEELGLPVIKK 695 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 T G ST +VL +LA+++ + + +L+YR KLK+TY D LP +I KTGRVHTS+ Q Sbjct: 696 TKTGV-STDADVLSQLAVNHEIAEHVLQYRQATKLKNTYIDALPQLICDKTGRVHTSFRQ 754 Query: 662 AVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIELRIMAHLSRD 720 V ATGRLSS++PNLQNIP+R E+G+ IR AF A E + ++ ADYSQIELR++AH S D Sbjct: 755 DVAATGRLSSSEPNLQNIPIRTEQGKAIRAAFTAGREGWSLLGADYSQIELRVLAHYSGD 814 Query: 721 KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 + L+ A+ + DIH AAEV G+ VTS+ RR AK INFG++YG S FGLA+ L I Sbjct: 815 EALIGAYHDDADIHTRVAAEVNGIEESEVTSDLRRIAKTINFGIVYGQSPFGLAKTLGIS 874 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKS----SNGARR 836 EA+ Y++LYF+RY GV +M T A+ + +GYV T+ GRR + ++ RR Sbjct: 875 NDEARDYIELYFQRYSGVEAFMMDTLARCRNEGYVATMLGRRREIKGVRDLAKLPESKRR 934 Query: 837 A--AAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVD 894 + ER AIN P+QGTAAD+IK AM+ V L+ + R+++Q+HDEL+ E +++D Sbjct: 935 SLTEPERIAINMPIQGTAADLIKLAMLRVHEQLKQSDLQARLLLQIHDELLLESPDEELD 994 Query: 895 AVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 A++ I + M + LDVPL V+V G W Sbjct: 995 ALSDTIREAMTSVMELDVPLKVDVAHGRTWADC 1027 >UniRef50_D1R879 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R879_9CHLA Length = 896 Score = 1006 bits (2601), Expect = 0.0, Method: Composition-based stats. Identities = 383/922 (41%), Positives = 547/922 (59%), Gaps = 38/922 (4%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 L ++D S +LYR+Y A +TN GE T A+YG + + L + P H VFD Sbjct: 10 LYVLDASGFLYRSYFAIRNMTNKQGESTNALYGFIRSVLKLFKDFNPEHLVCVFDGPNNA 69 Query: 69 F-RDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 R EL+ +YK+HR MP DLR QIE MG+P L+V VEADD +GT+A+ AE+ Sbjct: 70 KKRLELYPNYKAHRSAMPPDLRYQIEWAQDFCSLMGIPYLSVPEVEADDTMGTVAKWAEQ 129 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMT-NTILGPEEVVNKYGVPPELIIDFLALMGDS 186 G + T DKDMAQLV P++ L+NT NTIL + ++GVPP ++D LA+ GD+ Sbjct: 130 QGAITYLCTSDKDMAQLVNPHVFLLNTHKDNTILDAASIEKEWGVPPSQMVDLLAMTGDA 189 Query: 187 SDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLS 246 SDNIPG+ G GEKTA ALL+ G LD + A PE++ G K L+ ++A +S Sbjct: 190 SDNIPGLTGFGEKTAAALLRQFGSLDYILAHPEEVPG------KKKQETLQTEADLARIS 243 Query: 247 YQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAA 306 L TI VE+ + P + L + + F ++ + ++A Sbjct: 244 RDLVTIDLSVEIPQEIAFYKKTDPVIDPLKTFYARMNFNSLLRELGQEEPVEAAVEAEKE 303 Query: 307 KPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISA 366 YV + + E A + L FDTET + + A Sbjct: 304 T--------------------VEYVLVDEPEAFDALLKNLSSEKQICFDTETTDIQPLKA 343 Query: 367 NLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRG 426 LVG+ F I P A Y+P+ ++ ++R LE +KPL E+ G N+KYD Sbjct: 344 ELVGIGFGIHPKKAWYVPL-------NGKLGKQRVLEGVKPLFENSAIGFYGHNVKYDWH 396 Query: 427 ILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTF 486 +L N GI+++ I FDT+L SYILN+ + +H ++ LA + TI E+ GKGKN L+ Sbjct: 397 VLQNEGIQIQNICFDTILASYILNAHSRQHSLEVLALEYFGKVTIPISELIGKGKNVLSM 456 Query: 487 NQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVK 546 + +E Y ED D T +L + L K + LN++ IE+PL+ VL+++ER G+ Sbjct: 457 RDVPIERVTEYCCEDVDFTCRLKEVLEKQL-KERDLLNLYHQIELPLLVVLAKMERRGIY 515 Query: 547 IDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGA 606 +D L S+ELT L L++ + +AGEEFNL+S KQ+ +LF K GI KKT G Sbjct: 516 VDIPYLEQLSKELTQELKTLQESIYTMAGEEFNLNSPKQVSELLFIKLGIPAPKKTATGH 575 Query: 607 PSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTAT 666 STS EVLE L DYPL ILEYR L KL+STY D LP + P+T R+H++++Q+V AT Sbjct: 576 -STSAEVLEFLKNDYPLAGKILEYRLLEKLRSTYVDALPSQVIPRTHRIHSTFNQSVAAT 634 Query: 667 GRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIELRIMAHLSRDKGLLT 725 GRLSS DPNLQNIP+R EEGR+IR AF E + +SADYSQIELR++AHLS+D L+ Sbjct: 635 GRLSSQDPNLQNIPIRTEEGRKIRGAFRPEKEGWSFLSADYSQIELRLLAHLSQDPVLMA 694 Query: 726 AFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQ 785 AF +DIH TAA +F +PLE V+ EQR AKAINFG+IYG AFGLAR+L I K+A Sbjct: 695 AFQNNEDIHTYTAASMFEIPLEQVSKEQRYQAKAINFGIIYGQQAFGLARELGIEVKQAS 754 Query: 786 KYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAIN 845 K++ +YF+RYP + EY+++++ A+ G TL GR +P+I S N RAAAER A+N Sbjct: 755 KFITMYFQRYPKIKEYLDQSKENARATGKSVTLTGRERIIPEILSKNMQIRAAAERLAVN 814 Query: 846 APMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLME 905 P+QGTAAD+IK AM+ +D ++ + + MI+Q+HDEL+FE+ +++ ++ + ++M+ Sbjct: 815 TPLQGTAADLIKMAMLKMDEEIEKQHLKGFMILQIHDELIFEIPDEEISLFSQLVPEVMQ 874 Query: 906 NCTRLDVPLLVEVGSGENWDQA 927 + L+V L+V++ G+NW + Sbjct: 875 SVMLLNVSLVVDINIGKNWKEC 896 >UniRef50_Q1V0V5 DNA polymerase I n=3 Tax=Candidatus Pelagibacter RepID=Q1V0V5_PELUB Length = 924 Score = 1005 bits (2600), Expect = 0.0, Method: Composition-based stats. Identities = 375/944 (39%), Positives = 574/944 (60%), Gaps = 36/944 (3%) Query: 1 MVQIPQ-NPLILVDGSSYLYRAYHAFPPLTN-SAGEPTGAMYGVLNMLRSLIMQ------ 52 M +I + + L+DGS Y++RAY+A PPLT S G P GA+ G +ML L+ Sbjct: 1 MDKIKKTDHFYLIDGSGYIFRAYYALPPLTRKSDGLPVGAVSGFCSMLFKLLEDSKSNEN 60 Query: 53 -YKPTHAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSG 111 KPTH AV+FDA KTFR+E++ YK++R PDDL Q E + V A LP + + Sbjct: 61 LQKPTHFAVIFDAARKTFRNEIYSDYKANRSEAPDDLAPQFEYIRKSVVAFNLPSVDLPN 120 Query: 112 VEADDVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGV 171 EADD+I T + G V I + DKD+ QL ++ + + M N + PE++V K+GV Sbjct: 121 YEADDLIATYVEQILAKGAKVTIVSSDKDLMQLYRKDVRIFDPMKNKFITPEDIVTKFGV 180 Query: 172 PPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKT 231 PE +ID +L GDSSDN+PGVPG+G KTA L+ G L+ L ++I Sbjct: 181 GPEKVIDVQSLAGDSSDNVPGVPGIGVKTAAELINKYGTLEKLLDNAQEIKQN------K 234 Query: 232 MAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADV 291 L +NK+ A +S +L T+ D +E E+ +++ +L ++ EF R + V Sbjct: 235 RRETLIENKDKAIISKKLVTLMKDAPVERKLEEFHLKKIDKNKLYKFLREMEFNRLLSSV 294 Query: 292 EAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPV 351 + E + + PE IS NY I +E+ + WI + E+A Sbjct: 295 ISAYG---------EPLLEETAKETKPEKKHQNISKKNYHLITNEKEIDEWINEAEEAGE 345 Query: 352 FAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLED 411 A DTET SLD +LVG+S + + G A YIP+ H + +E ++ LKPLLED Sbjct: 346 LAIDTETSSLDAHQTDLVGISLSTKIGKACYIPIGHK---FKGCLKKETVIKKLKPLLED 402 Query: 412 EKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTI 471 + K+GQN+K+D +L +GI + + DTML SY+L++ RH+MD+L+E L+HKTI Sbjct: 403 KSVKKIGQNIKFDFIVLYKHGINMNSME-DTMLMSYVLDAGKNRHNMDTLSEIHLQHKTI 461 Query: 472 TFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEM 531 +F+EI G GK ++ F+ + L++A YAAEDAD+T +L+ +L K + N++E E Sbjct: 462 SFKEIVGTGKKEINFSDVELDKAMEYAAEDADITYRLYKIFSKNL-KLEKLTNIYEIFEK 520 Query: 532 PLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILF 591 PL+ +L+ +E G+KID K L SE+ ++++LEK+ +I+ ++FN++S KQL I++ Sbjct: 521 PLIKILAFMEIEGIKIDNKFLKVLSEKFEKKISKLEKEVFKISKKKFNIASPKQLGEIIY 580 Query: 592 EKQGIKPLKKTPGGAPSTSEEVLEELA-LDYPLPKVILEYRGLAKLKSTYTDKLPLMINP 650 I LKKT G+ +T+ VLE+LA + PK+IL++R ++KLK+TY+D LP INP Sbjct: 581 NDLKIAVLKKTRKGSFATNASVLEDLAFKGHEFPKLILDWRQVSKLKNTYSDALPEHINP 640 Query: 651 KTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIE 710 T RVHTS+ A T TGRL+S+DPNLQNIP+++E+G+ IR+AFIA + + ++SADY+QIE Sbjct: 641 NTKRVHTSFLLAATTTGRLASSDPNLQNIPIKSEDGKDIRKAFIAEKGFTLISADYNQIE 700 Query: 711 LRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSA 770 +RI+A L+ K L AF+ +DIH TA++VF + ++ V + RR AKAINFG+IYG+S Sbjct: 701 MRILADLAEVKELKKAFSNNEDIHSLTASQVFNVDIKKVDQDMRRKAKAINFGIIYGISQ 760 Query: 771 FGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKS 830 +GLA+Q+N+ EA ++++ YF ++P + YM+ T ++ GYV + GRR + I Sbjct: 761 YGLAKQINVSNHEADEFLNAYFLKFPEIKIYMDNTIKFCRKSGYVTNIFGRRSHFNGIND 820 Query: 831 SNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQA-EQPRVRMIMQVHDELVFEVH 889 N R ERAAINAP+QG+A++I++ AMI ++ ++ + + ++++Q+HDEL+FEV Sbjct: 821 KNFNVRNFQERAAINAPIQGSASEIMRLAMIRLNKKFESIKNNKSKILLQIHDELIFEVP 880 Query: 890 KDDVDAVAKQIHQLMENCTR-----LDVPLLVEVGSGENWDQAH 928 +V + + I M + T PL V+V +G+NW H Sbjct: 881 VKEVKNITEIIKDEMTSVTESDLHTFSTPLTVDVNTGDNWGILH 924 >UniRef50_D2R075 DNA polymerase I n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R075_9PLAN Length = 966 Score = 1004 bits (2595), Expect = 0.0, Method: Composition-based stats. Identities = 356/958 (37%), Positives = 525/958 (54%), Gaps = 40/958 (4%) Query: 2 VQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 + + + ++D S +Y+ +HA P +T+ +G+P GA+ G + + LI + Sbjct: 12 TPLGDSTVYVIDAHSLIYQVFHAMPEMTSPSGQPVGAVQGFVRDMLDLIENRSAEYIVAA 71 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 FD TFR ++E+YK HR MP DL++QI + + A+G+ L++ G EADD++ TL Sbjct: 72 FDHPSPTFRHTMYENYKVHRDEMPGDLQSQIPIIQQFLDALGITQLSIPGFEADDILATL 131 Query: 122 AREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLA 181 A+ G L+ T DKD QL+ + ++N N I ++ +G+ P+ ++DF + Sbjct: 132 AKRVASDGGRCLVVTSDKDCRQLINDRVQMLNLRKNEIFDDVALMATWGIRPDQVVDFQS 191 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 L+GDS DN+PGVP +G K AQ LL L+ + ++++G L+ ++ Sbjct: 192 LVGDSVDNVPGVPLIGPKIAQELLAKYETLEGVLDNADQVSGA------KRKENLKNFRD 245 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADV---------- 291 A+LS L +K D+E +L + V + E L+ L + F++ + Sbjct: 246 QAFLSRDLVRLKNDMEFDLDWSSVRVGRYQIEMLMELCRACGFRQLLTRIEKLAKRGAPA 305 Query: 292 -----------------EAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTIL 334 + A A +TS + A Y + Sbjct: 306 KSSRSTGYSSSIPAPQRDRDTPPDELYAGTEAADSQTSPSGSLGPQVAAAPWEATYRRVE 365 Query: 335 DEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPD 394 + L+ I +++ A DTET S+ A +VG SF G A Y+P+ + Sbjct: 366 SLDQLRTIIDEIKAAGSLVIDTETTSVQPRWAEIVGYSFCYRDGEAWYLPIRAPENEQAL 425 Query: 395 QISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAG 454 + +L +P+LED KVGQN+KYD +L + GIELRG AFDTM+ Y+++ Sbjct: 426 CLDATAVADLFRPVLEDPAIAKVGQNIKYDMVVLRSAGIELRGAAFDTMVADYLIDPGER 485 Query: 455 RHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWP 514 H++D LA R L H+ I E + G GK Q+ +Q+ L YAAEDA V +L + P Sbjct: 486 SHNLDELARRHLGHQNIEIESLIGTGKKQIRMDQVPLAAITDYAAEDALVPYRLLPILEP 545 Query: 515 DLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIA 574 L++ G + +F ++EMPLV VL+ +E G+K+D L S + + ++ LE + + I Sbjct: 546 RLEQ-DGLVPLFRDLEMPLVEVLAELEHRGIKVDRARLVELSTDFSTKITALENEIYAIN 604 Query: 575 GEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLA 634 EFN+ S QL +LFE + LKKT G PS EVLE+LA + LPK +LEYR LA Sbjct: 605 HGEFNIDSRLQLAKLLFEDLKLPILKKTKTG-PSMDAEVLEDLARLHELPKKVLEYRHLA 663 Query: 635 KLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFI 694 KL+STY D L +I+P TGRVHTS Q V ATGRLSS DPNLQNIPVR EGR IR AF Sbjct: 664 KLRSTYVDSLQELIHPVTGRVHTSLKQDVAATGRLSSQDPNLQNIPVRTAEGRAIRSAFQ 723 Query: 695 AP-EDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQ 753 E + +++ADYSQIELR++AH S D L AFA +DIH A++V+ + VT E Sbjct: 724 PGIEGWKLMAADYSQIELRVLAHFSGDAALAEAFASDRDIHTQVASQVYEVAPGDVTPEM 783 Query: 754 RRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQG 813 RRSAKAINFG+IYG S FGLAR L I EA ++ YF +YPGV ++M T ++QG Sbjct: 784 RRSAKAINFGVIYGQSPFGLARSLGIENDEAAAFISAYFAQYPGVDDFMRETLIGCRKQG 843 Query: 814 YVETLDGRRLYLPDIKSS----NGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQA 869 YV T+ GRR + ++ + +R ER AIN +QG+AADIIKRAMI V L+ Sbjct: 844 YVTTIAGRRRPVTGVRDPHAVNDKRQRTLPERIAINTVIQGSAADIIKRAMITVHRRLKE 903 Query: 870 EQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 E+ + RM++Q+HDEL+FE ++ + + + M ++ VPL ++V +G NW Sbjct: 904 EKLQARMLLQIHDELLFEFPPEEQGQLRDLVVESMSTAEKISVPLKIDVKTGLNWADC 961 >UniRef50_C1ZLA6 DNA polymerase I n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZLA6_PLALI Length = 1031 Score = 1003 bits (2594), Expect = 0.0, Method: Composition-based stats. Identities = 355/953 (37%), Positives = 530/953 (55%), Gaps = 36/953 (3%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 + IP+ L+D +++ +HA PP+T+ AG+PT A++G L LI + KPT Sbjct: 88 VPTIPRERAWLIDVFGVMFQVFHAIPPMTSPAGQPTNAVFGFCRDLLWLIEKQKPTWLIC 147 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 D+ G R+ + YK++R MP+DLR QI L + +A GLP++ G EADDV+ + Sbjct: 148 AMDSPGPGIRESWYPEYKANRTEMPEDLRPQIPLLKEVFEAFGLPIIQQDGWEADDVLAS 207 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL 180 LA + + G V I T DKD QL+TP I + N T ++ ++G+ P+ ++DF Sbjct: 208 LAAQFARHGTDVAIVTNDKDARQLLTPQIQIYNLRKMTWFNEASLLEEWGIRPDQVVDFQ 267 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 L+GD+ DN+PGVP VG K A ALLQ L+ + A ++ G + L+ Sbjct: 268 GLVGDAVDNVPGVPLVGPKKAAALLQQFETLEGVLAHADQAPGA------KLKENLKNFA 321 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTA---DVEAGKWL 297 E A LS +L + T+++L+ E +P E+L LF++ F++ V Sbjct: 322 EQARLSQKLVRLNTELQLDFDPEAGRHFRPDVEKLQALFRRLGFRKLVDEAARVLGQVPS 381 Query: 298 QAKGAKPAAKPQETSVADEAPEVTATVISYDN---------------YVTILDEETLKAW 342 A + S+ D P + + +N + + E L A Sbjct: 382 SAASTTQNSATTTPSLNDGNPAENSLFSAPENNTVVPSKPLQRLERTWEMVNTPEGLAAL 441 Query: 343 IAKLEKAPVFAFDTETDSLDNISANLVGLSFAI-----EPGVAAYIPVAHDYLDAPDQIS 397 +L D ET LD + +VG + A +PG A Y+PV + Sbjct: 442 SRQLPLLTQICIDLETTGLDPLRDEIVGWAIAWAAQHGQPGRAVYLPV--LGPPGSVLLD 499 Query: 398 RERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHD 457 ++ LKP+LE+ + + QN+K+D + GI I DTM+ Y+L++ A H+ Sbjct: 500 GTAVVQTLKPILENPQCQLINQNVKFDLLAMRKVGIRPATIGLDTMVGDYLLDAGARSHN 559 Query: 458 MDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQ 517 ++ L +++L TI ++ G GKNQ T NQI +E YA EDA++ +++ + L Sbjct: 560 LEVLGQKYLSAATIPISDLLGSGKNQKTMNQIEIERVAEYATEDAELVVRMAPIIESQL- 618 Query: 518 KHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEE 577 + G +++ +E PL+PVL+ +E G+K+D L S+EL++ LA L + HE+AG E Sbjct: 619 QEAGLWKLYDEVEKPLIPVLADMEFKGIKVDVPELERQSQELSITLARLMSEIHELAGRE 678 Query: 578 FNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLK 637 FN+ S QL+ ILFE+ + KKT G PST +EVLE LA +PLP I E+R L KLK Sbjct: 679 FNIDSPMQLRKILFEELKLPVQKKTKTG-PSTDQEVLELLAPLHPLPAKITEHRHLTKLK 737 Query: 638 STYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-P 696 TY D LPL+++P++GR+HTS++Q V ATGRLSS+DPNLQNIP+R EG RIR+AF++ Sbjct: 738 GTYLDALPLLVHPQSGRIHTSFNQVVAATGRLSSSDPNLQNIPIRTPEGSRIRRAFVSCD 797 Query: 697 EDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRS 756 ++ +V ADYSQIELR++AH S+D L++AF G+DIHR AA+V + LE VTS+ RR Sbjct: 798 PEWRLVCADYSQIELRMLAHFSQDPALVSAFEHGEDIHRLVAAQVHQVALEDVTSDMRRI 857 Query: 757 AKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVE 816 AKA+NFG++YG S +GL+ L I R+ A ++D YF RY GV +ME + GY Sbjct: 858 AKAVNFGVMYGQSPYGLSAALGISREAATTFIDEYFTRYAGVTTFMENVLDECLATGYAR 917 Query: 817 TLDGRRLYLPDIKSSNGARRAA--AERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRV 874 T+ GRR + ++ R AER IN +QG+AAD+IK AMI V L+ E Sbjct: 918 TILGRRRPIEGVRGPRERNRNRNMAERTGINTVIQGSAADLIKMAMIRVHHRLERENHPG 977 Query: 875 RMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 ++++Q+HDELV E + + + + M LDVPL V+V G NW A Sbjct: 978 QLLLQIHDELVLEAPAHLAEELGALVSEEMTKALPLDVPLEVDVAIGTNWLDA 1030 >UniRef50_B0MYJ0 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MYJ0_9BACT Length = 959 Score = 1003 bits (2593), Expect = 0.0, Method: Composition-based stats. Identities = 391/975 (40%), Positives = 562/975 (57%), Gaps = 70/975 (7%) Query: 7 NPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 L LVD + +++ Y+AF P+ N AG T ++G LR + + P V FD Sbjct: 2 KKLFLVDAYALIFKYYYAFMGRPMRNRAGMNTSVVFGFTKFLRDIQKREHPDLLGVAFDP 61 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 KG +FR E+F YK++R P+D+ + + +V+AM +P+L V G EADDVIGTLA + Sbjct: 62 KGGSFRREIFPEYKANRAETPEDILLSVPYVKRIVEAMCIPVLEVPGYEADDVIGTLAHK 121 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTN---TILGPEEVVNKYGVP-PELIIDFL 180 +AG V + T DKD QLV N + N I+G E + KYG+ P+L+ D L Sbjct: 122 GVEAGYDVFMVTPDKDYGQLVCDNCKIYKQKGNDGIEIVGREAIREKYGIENPQLVRDIL 181 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 AL GD+SDNIPGVPG+GEKTA L+Q G ++ + ++I K+ + Sbjct: 182 ALWGDASDNIPGVPGIGEKTACKLVQEWGTVENILQNADRIK-------SRQGEKIAEWG 234 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 + L+ +L TI DV ++ E L V P +EL LF + +F+ + D+ + Sbjct: 235 DKLLLAKRLTTICLDVPIDFREEDLTVCAPRIDELKALFAELDFRMFLNDLTNLAPAEPL 294 Query: 301 GAKPAAKPQET--------------------------------------------SVADE 316 P Q E Sbjct: 295 PEGPRQAAQTQLAEVARAKSAAAKKAALAGQGDLFAPAADSGESPASDRESASSDEQTAE 354 Query: 317 APEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIE 376 + E + Y + + + L+A + ++ P F FDTET D + +VGLS A+ Sbjct: 355 SEEFATAQTTPHAYTIVRNAQELEAVLREVAACPEFCFDTETTGFDIFNDRIVGLSLAVR 414 Query: 377 PGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELR 436 P A YIP ++ + L++PL D K K+GQN+K+D +LA G+E+R Sbjct: 415 PYEAWYIPF--------NESNTAEYAALIRPLFADGKIAKIGQNIKFDLMVLARLGVEIR 466 Query: 437 GIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGR 496 G +DTM+ Y+L+ RH+MD+LA R+L ++ I+ + GKG QLT + I+LE Sbjct: 467 GRLYDTMILHYLLDP-ESRHNMDALAMRYLNYRPISITSLIGKGARQLTMDMISLERVAE 525 Query: 497 YAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHS 556 YAAEDADVTL+L +WP +++ ++ IE P++ VL+ IE GV+ID + L ++ Sbjct: 526 YAAEDADVTLRLKQVLWPKVEELD-LAGLYLEIEEPMIAVLAEIEMAGVRIDSEALAEYA 584 Query: 557 EELTLRLAELEKKAHEIAGEE-FNLSSTKQLQTILFEKQGI-KPLKKTPGGAPSTSEEVL 614 EL L +LE +A E N++S +QL +LF K I + K T ST EE L Sbjct: 585 VELNKTLNDLEGDIRRLADEPSLNVNSARQLGEVLFGKLRIAEKPKMTKTKQFSTEEEYL 644 Query: 615 EELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDP 674 + A Y + ILEYRG+ KL STY + LPL++NP TG++HTS++QAVTATGRLSST+P Sbjct: 645 QTFAHKYEIVDKILEYRGVKKLLSTYVEALPLLVNPVTGKIHTSFNQAVTATGRLSSTNP 704 Query: 675 NLQNIPVRNEEGRRIRQAFIAPED-YVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDI 733 NLQNIPVR+E GRRIR+AFI +D ++++SADYSQ+ELR+MAHLS D+ L+ AF G+D+ Sbjct: 705 NLQNIPVRDELGRRIRKAFIPSDDEHLLLSADYSQVELRLMAHLSGDESLIAAFEHGEDV 764 Query: 734 HRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFE 793 H ATAA +FG + V S++RR AK NFG+IYG+SAFGL+++L+IPRKEA++ ++ YF Sbjct: 765 HAATAARLFGKEVAEVDSDERRKAKTANFGIIYGISAFGLSQRLDIPRKEAKEIIEGYFA 824 Query: 794 RYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAA 853 YP V EYM+R +AK GYV T+ GRR YL DI S N R AER A+NAP+QG+AA Sbjct: 825 SYPKVKEYMDRVVEEAKRDGYVSTIFGRRRYLNDIASRNAVARGLAERNAVNAPIQGSAA 884 Query: 854 DIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVP 913 DI+K AMI V + E R ++I+QVHDELV ++ + + + V + + ME+ L V Sbjct: 885 DIMKIAMIRVSRRFREEGIRSKVILQVHDELVVDMLRSEQERVIAIVTEAMESAAALRVR 944 Query: 914 LLVEVGSGENWDQAH 928 L+V+ G G+NW +AH Sbjct: 945 LVVDCGVGDNWLEAH 959 >UniRef50_C8PRX0 DNA polymerase I n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PRX0_9SPIO Length = 951 Score = 1003 bits (2593), Expect = 0.0, Method: Composition-based stats. Identities = 382/964 (39%), Positives = 539/964 (55%), Gaps = 49/964 (5%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHA 58 M Q Q+ L L+D +YR+Y AF PLTN AGE A+YG L ++ Y+P + Sbjct: 1 MTQHTQDTLYLLDSYGLIYRSYFAFISHPLTNKAGENVSALYGFFRSLAMILKTYRPRYF 60 Query: 59 AVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVI 118 FD++ TFR E + YK+ R P+DL AQI + ++ A+G+ L G EADD+I Sbjct: 61 LAAFDSRTPTFRHEWYSEYKATRDKTPEDLHAQIPHIEKILTALGIACLRKDGFEADDII 120 Query: 119 GTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTIL---GPEEVVNKYGVPPEL 175 TLAR + + GR +I +GDKD+AQLV ++++ + L G EEV +GV P Sbjct: 121 ATLARRSAQEGRRCVIISGDKDLAQLVGDFVSVLKPDKSEALAQCGVEEVKAHWGVAPAQ 180 Query: 176 IIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAK 235 ++D+L+L+GDS+DNIPGV G+G KTA LLQ G LD +Y + IAG + K Sbjct: 181 MLDYLSLIGDSADNIPGVKGIGPKTAVKLLQDYGTLDAVYEHIDSIAG-------AVQKK 233 Query: 236 LEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKR--------- 286 L K+ AY S +L T+ +V +E T + E L K+YE R Sbjct: 234 LAAGKDSAYFSKKLITLADNVPIEGTLDDYRCTALHYAETAALLKEYELPRLGELYAKAA 293 Query: 287 ----------------WTADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNY 330 ADV + A A + + Y Sbjct: 294 GESETAGSAAEQNTAAGKADVNTATAGKTGATTAADDIGTKPANSAAAQPAELRKNDGEY 353 Query: 331 VTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYL 390 T+ D + L+A IA+ E AFD ET L+ + +LVG S +++ G Y+P+ Sbjct: 354 RTVTDAKELEAVIAEAEAQGFAAFDCETTGLNPLYDSLVGFSLSLKAGTGIYVPLKAPAP 413 Query: 391 DAPDQISRERALELLKPLLE----DEKALKVGQNLKYDRGILANYGIELRG--IAFDTML 444 + +Q L K LL +++ V N K+D +L G+ R FDTM+ Sbjct: 414 ELGEQPFAVMPLAAAKKLLARLWNNKELTLVLHNGKFDYQVLRTAGVFTRAGCRLFDTMI 473 Query: 445 ESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADV 504 +++L +++L E L + + ++++ KG TF ++L +A YAAEDAD Sbjct: 474 AAWLLEPDNLSFGLENLTEAQLGLQGLDYKDVVPKG---CTFAAVSLPQATAYAAEDADF 530 Query: 505 TLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLA 564 TLQL+ P L++ +FE +EMPL+P+L+ +E G+ + + L SEEL LA Sbjct: 531 TLQLYHVYKPALEQA-NLTTLFETLEMPLMPLLADMEAQGIFLKKEELAAFSEELAGTLA 589 Query: 565 ELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLP 624 E + +++ G FN++S KQLQ +LF ++ + KKT G ST VLEELA LP Sbjct: 590 RDEAEIYKLVGHPFNIASPKQLQEVLFTERKLPTGKKTKTG-YSTDISVLEELAAIDELP 648 Query: 625 KVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNE 684 IL+YR AKLKS Y D LPL+ + GR+HTS+ Q TATGRLSS DPNLQNIP+R E Sbjct: 649 AKILDYRASAKLKSGYADALPLLADA-NGRIHTSFIQTGTATGRLSSRDPNLQNIPIRGE 707 Query: 685 EGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGL 744 EGR+IR+AF A + ++SADY+QIEL I+AH S+D+ L+ AF +G D+H ATAA +F + Sbjct: 708 EGRKIRKAFYAADGCKLISADYAQIELVILAHFSQDENLVKAFRQGTDVHAATAALIFNV 767 Query: 745 PLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMER 804 P+E V + RR AK INFG++YGMSAF LA QL I R EA ++ YF Y GV +ME Sbjct: 768 PVENVVPDMRRIAKVINFGVMYGMSAFRLANQLRISRTEAADFITRYFTTYSGVAAFMET 827 Query: 805 TRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVD 864 + A E+G+VETL GRR Y+ I S N +RAAAER AIN P+QG+AADI+K AM+ VD Sbjct: 828 LKESAAEKGFVETLMGRRRYIRAINSRNQTQRAAAERIAINTPIQGSAADIVKTAMLHVD 887 Query: 865 AWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW 924 L+ + +++QVHDEL+ E +VD+V + Q ME+ +L VPL V + SG W Sbjct: 888 RALKRQHLSAHLLLQVHDELILEAPDSEVDSVKALLKQEMEHVVKLAVPLRVSIESGSCW 947 Query: 925 DQAH 928 H Sbjct: 948 GDFH 951 >UniRef50_A6CAX6 DNA polymerase I n=2 Tax=Planctomycetaceae RepID=A6CAX6_9PLAN Length = 900 Score = 1002 bits (2592), Expect = 0.0, Method: Composition-based stats. Identities = 356/922 (38%), Positives = 539/922 (58%), Gaps = 33/922 (3%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 + L ++D S +++ +HA P +T G+PT A++G+ + ++I + P + D+ Sbjct: 2 KETLYIIDTFSLVFQVFHAVPAMTGPTGQPTNAIFGITRDILNIIKTHSPDYLIFAMDSS 61 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 G R++L+ YK++R MP+DL QI + +VK +P++ G EADDV T+AR A Sbjct: 62 GPGTRNDLYSEYKANRSAMPEDLVPQIPHIMDVVKGFQVPVIECPGWEADDVFATIARLA 121 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185 + G I T DKD QL+ +I L N N + E V +GV P+ +IDF +L+GD Sbjct: 122 NEKGIETTIVTNDKDARQLINDSIRLYNIRKNQFMDAEAVQADWGVRPDQVIDFQSLVGD 181 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 S DNIPGVP VG K AQ L++ G L+ + A +K G + L++ + A + Sbjct: 182 SVDNIPGVPLVGPKKAQTLIEQFGTLEGVLANADKAKG------PKLQQNLKEFADQARM 235 Query: 246 SYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPA 305 S +L T+ ++L + E + P E L LF + F+R+ D+ Sbjct: 236 SRELVTLNQSLDLNINWEASRLTHPDRERLHQLFVDFGFRRFAEDM-------------- 281 Query: 306 AKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNIS 365 +E + PE + TI + + ++A L++ F D ET L Sbjct: 282 ---KEVLSTEAPPEPVERIRE-----TIDTKPAFETFLALLKEQDEFCVDLETTGLKPAE 333 Query: 366 ANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDR 425 A +VG + + E YIPV + + LE LKP+LED + L QN+KYD Sbjct: 334 AEIVGWAISWEKHRGFYIPVEGPSGQLA--LDPQYVLEHLKPILEDPEILITNQNIKYDM 391 Query: 426 GILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLT 485 +L G+ L+G++ D M+ SY++++ H +D L+ER+L H I E+ G GK Q Sbjct: 392 VVLMRVGVFLQGVSIDPMVASYLISAGERGHSLDKLSERYLNHTMIPISELIGSGKQQKK 451 Query: 486 FNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGV 545 ++ +++ YA EDA++ QL + +L KH G ++ +E PL+ +L+ +E G+ Sbjct: 452 MFEVDVDKVAEYAVEDAEIAWQLSRILQDEL-KHAGLWELYWELERPLISILAEMEFTGI 510 Query: 546 KIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGG 605 K+D L S+ L RL L + HEIAG EFN++S QL+T+LFE+ + KKT G Sbjct: 511 KVDTAELKQQSQLLEKRLTTLISEIHEIAGHEFNIASPLQLRTVLFEELNLPVFKKTKTG 570 Query: 606 APSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTA 665 PST + VLE+LA + LP I E+R L+KLKSTY D LP ++NP+TGR+H S++Q V A Sbjct: 571 -PSTDQSVLEKLAPLHALPARITEHRHLSKLKSTYLDALPGLVNPETGRIHASFNQVVAA 629 Query: 666 TGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIELRIMAHLSRDKGLL 724 TGRLSS+DPNLQNIPVR +EGR+IR+AFI E++ ++ ADYSQIELRI+AHLS+D L Sbjct: 630 TGRLSSSDPNLQNIPVRTQEGRQIRKAFIPQDENWRLLCADYSQIELRILAHLSQDVALS 689 Query: 725 TAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEA 784 AF EG DIH A A+++F +P + V S+ RR+AKA+NFG+IYG S FGL+ + IP+ EA Sbjct: 690 QAFREGADIHTAVASDIFRVPHDQVDSDMRRTAKAVNFGVIYGQSPFGLSEAIGIPQSEA 749 Query: 785 QKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAI 844 +++ YF RY GV E++++ +Q +VET+ GR+ + ++ + ER AI Sbjct: 750 AGFIEDYFVRYQGVREFLDQILEDCAKQKFVETICGRKREIQGVRGGVQKQLNMPERTAI 809 Query: 845 NAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLM 904 N +QG+AAD+IK+AM+ V ++ EQ RM+MQ+HDELVFEV +D + + + M Sbjct: 810 NTVIQGSAADLIKQAMLNVSDRIKQEQHPGRMLMQIHDELVFEVPLTALDTLGLIVREEM 869 Query: 905 ENCTRLDVPLLVEVGSGENWDQ 926 E+ L+VPL+V++ SG NW + Sbjct: 870 ESAMDLEVPLIVDMSSGLNWLE 891 >UniRef50_Q2S226 DNA polymerase I n=4 Tax=Rhodothermaceae RepID=Q2S226_SALRD Length = 926 Score = 1000 bits (2585), Expect = 0.0, Method: Composition-based stats. Identities = 368/928 (39%), Positives = 557/928 (60%), Gaps = 22/928 (2%) Query: 9 LILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L L+D S YRA++ F PL NS G+ T A YG N L LI + HAAVVFD Sbjct: 13 LYLIDAMSLAYRAHYIFISRPLINSKGQNTSAAYGFTNSLLKLIEDHDIEHAAVVFDEGE 72 Query: 67 K-TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 + TFR E+++ YK++R P P++L I + +V+ + +P+L V GVEADDVIG LA++A Sbjct: 73 EDTFRKEMYDDYKANRDPPPEELLENIPYIKEIVEGLDIPVLEVPGVEADDVIGALAKQA 132 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLA 181 E V+I + DKD QL++ +++ I + ++YG+ P +D LA Sbjct: 133 EADDADVVIVSPDKDFKQLLSDKVSIYKPAKGDQDFEIKTGDTFRDEYGLDPAQFVDMLA 192 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGDSSDN+PGV G+GEKTAQ LL+ ++ L + ++G K ++++ E Sbjct: 193 LMGDSSDNVPGVYGIGEKTAQKLLREYHSVENLIDHADDLSG------KRAREGMQEHAE 246 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 A LS +L I+T++++ L +L+ ++ E+L +F++ EF + + ++ Sbjct: 247 EARLSKRLVRIRTELDVGLDWHELQRRELDEEKLTAVFQELEFDSFGDRLGIEGGEGSEE 306 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 P +V +Y + EE L A+ +L + +AFD E S Sbjct: 307 ETDEDDPDLQFDFGPYEKVQELDPEAVDYEVVRTEEELHAFADRLGEEARYAFDAEATSR 366 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 D ++A+LVGLSF+ E A Y+P PD + L++L P+L K+G NL Sbjct: 367 DPMTADLVGLSFSSEAERATYVPTP-----LPDDTPTDAVLDVLGPVLAR-DTEKLGHNL 420 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 KYD +L +G+E+ G FDTM+ Y++ H++D +A L +K + ++ G Sbjct: 421 KYDLLLLKQHGVEVGGTLFDTMVAHYLVAPEEN-HNLDDVARSVLNYKMVPIADLIGDET 479 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 ++ + ++ +E A YA EDAD++ +L ++ L + L+V +IE PLV VL+ +E Sbjct: 480 DRDSMREVEVETAAPYACEDADISYRLADELEAQL-EDGNVLDVAHDIEFPLVHVLATME 538 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 G+++D VL L RL+ +E++ E+AGEEFN++ST+QL ILFEK + + K Sbjct: 539 HTGIRLDTDVLDEILAGLEERLSGIEEEVFELAGEEFNINSTQQLGEILFEKLDLPVVSK 598 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 TP G PST E VL+EL+ ++ +P ++L++R KLKSTY D L +++P+TGR+HTS++Q Sbjct: 599 TPTGKPSTKESVLQELSTEHEIPGLVLDWRSTYKLKSTYLDSLGELVHPETGRLHTSFNQ 658 Query: 662 AVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDK 721 TATGRLSS+DPNLQNIP+R E GR+IR+AF+ + + ++SADY+QIELRI+A +S D Sbjct: 659 TRTATGRLSSSDPNLQNIPIRTEMGRQIRRAFVPKDGWALLSADYAQIELRILAAMSGDD 718 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 + F EG DIH AA V+G+ E VT EQR AK +N+G+ YG+S +GLA+++ +P Sbjct: 719 AMRATFQEGGDIHTDAAARVYGIDPEDVTPEQRSKAKEVNYGIPYGISPWGLAQRMRMPV 778 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 EAQ + Y + YPGV + + +A+++GY ETL GRR YLPDI SSN R+AAER Sbjct: 779 DEAQDIIKQYRKSYPGVSQLLNELVEKAQDKGYAETLLGRRRYLPDIDSSNSNARSAAER 838 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 A+N P+QGT AD+IK AM + L + +M++QVHDELVFEV D++DA I Sbjct: 839 VAVNMPIQGTQADMIKIAMNRIHDRLAGDDWATQMLLQVHDELVFEVPPDELDAAQTMID 898 Query: 902 QLMENCTRL-DVPLLVEVGSGENWDQAH 928 M + L DVP+ V++ +G+NW +AH Sbjct: 899 DEMRDALPLDDVPVTVDMDTGDNWLEAH 926 >UniRef50_C8QY72 DNA polymerase I n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QY72_9DELT Length = 914 Score = 998 bits (2581), Expect = 0.0, Method: Composition-based stats. Identities = 393/947 (41%), Positives = 546/947 (57%), Gaps = 58/947 (6%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + PL L+DGS+Y+YRAYHA PL+N+AG+PT A+YG L +I + P + A+ +D Sbjct: 2 SSREPLYLIDGSAYIYRAYHAIRPLSNAAGQPTHAVYGFTTTLLRVIREKTPRYLAIAYD 61 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 +KG FR E++ YK++RP MP DL QI + +V A + L +GVEADD+I AR Sbjct: 62 SKGPNFRHEIYPAYKANRPEMPADLACQIPYIKEVVSAYHITTLEQAGVEADDLIAAAAR 121 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALM 183 +P++I +GDKD+ QLV +TL + M +T + P V KY V P+ ++D+ AL+ Sbjct: 122 RLAGPDQPLIIVSGDKDLLQLVNEWVTLWDPMQDTFMDPAAVAKKYQVSPQQLLDYFALI 181 Query: 184 GDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVA 243 GDSSDN+PGVPGVG KTA L+ G L+ L+A E+++ A + KL +++ A Sbjct: 182 GDSSDNVPGVPGVGPKTAAKLIDQFGSLEQLFANLEQVS------AAKLREKLAAHRQDA 235 Query: 244 YLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAK 303 L+ +L +K D+EL + + + P ++L LF + EF R Sbjct: 236 QLARRLIRLKDDLELPTSLDDYTLPPPDQDKLRQLFTELEFTRLIK-------------- 281 Query: 304 PAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPV-FAFDTETDSLD 362 E+ A I+ D + I + L +A L P DTET SLD Sbjct: 282 --------------SELQAEKIAADAFQLINSLDQLHELVAILAADPAPLVIDTETTSLD 327 Query: 363 NISANLVGLSF------------------AIEPGVAAYIPVAH---DYLDAPDQISRERA 401 + A LVG+S A E G Y+P+AH D A +Q+ Sbjct: 328 PLQAELVGISLTLAAPGSDESEAKASRTAAGENGACWYLPIAHRREDGSAAANQLPLAEV 387 Query: 402 LELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSL 461 L PLL D++ LK+G NLKYD +L + + L DTM+ SY+++ H +D L Sbjct: 388 RRALAPLLADDRRLKLGHNLKYDLQVLHRHDLPLAPPLADTMIASYLIDPSRRSHGLDVL 447 Query: 462 AERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKG 521 +E L+ + +F E+ + + F +A A Y+ ED T L P L + + Sbjct: 448 SEELLQRRLTSFAEVTDRDRRPEAFAHVAPAAAAAYSCEDVAATRLLWQLFQPKLAELE- 506 Query: 522 PLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLS 581 +F +E+ L+P+L+R+ER G+ +D +VL + E + L L K +++AG EFN++ Sbjct: 507 LAELFYQVEITLLPILARMERVGILLDGQVLKELAAEFSQELERLSSKIYQLAGVEFNIN 566 Query: 582 STKQLQTILFEKQGIKPLKKTPGGA-PSTSEEVLEELALDYPLPKVILEYRGLAKLKSTY 640 S +QL +LFE+ + +KT G ST LE LA + LP I+ R L+KLKSTY Sbjct: 567 SPRQLGEVLFERLKLPHGRKTKGKTGYSTDIRELERLAAYHDLPAAIIAQRNLSKLKSTY 626 Query: 641 TDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYV 700 DKL +INP GR+HTS++Q VTATGRLSS++PNLQNIPVR +EGRRIR AFIA + Sbjct: 627 VDKLSTLINPADGRIHTSFNQTVTATGRLSSSNPNLQNIPVRTQEGRRIRGAFIAAPGHR 686 Query: 701 IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAI 760 ++ADYSQI+LR++AH S D LL AF + +DIHR TAAE+F + VT++ RR AK I Sbjct: 687 FLAADYSQIDLRVLAHYSADPMLLEAFQQDQDIHRRTAAEIFRVNPAMVTADMRRVAKTI 746 Query: 761 NFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDG 820 NFG+IYGMSAFGLA QL RKEAQ ++D YFE Y GV +ME QA+ G+V TL Sbjct: 747 NFGIIYGMSAFGLAEQLRCSRKEAQVFIDRYFELYRGVKTFMEEIVEQARRDGFVRTLLK 806 Query: 821 RRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQV 880 RR LP+I SSN RR AER AIN P+QGTAADIIK A IA D L+ + ++Q+ Sbjct: 807 RRRQLPEINSSNKLRREFAERTAINTPIQGTAADIIKLAAIACDRELRRKNFNTEALLQI 866 Query: 881 HDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 HDEL+FEV +D+ AV K + Q MEN L VPL V + SG N Sbjct: 867 HDELIFEVPEDEQAAVGKLVQQAMENVMELTVPLRVNLKSGPNLAAT 913 >UniRef50_Q2GBP7 DNA polymerase I n=10 Tax=Alphaproteobacteria RepID=Q2GBP7_NOVAD Length = 945 Score = 997 bits (2578), Expect = 0.0, Method: Composition-based stats. Identities = 405/954 (42%), Positives = 548/954 (57%), Gaps = 43/954 (4%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYK----PTHAAVV 61 + L LVDGS+Y++RAYH PPLTN G P GA+YG ML L PTH AV+ Sbjct: 4 KQHLYLVDGSAYIFRAYHRLPPLTNPRGVPVGAVYGYTTMLWKLAEDLHKADGPTHLAVI 63 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 D G +FR++L++ YK++RPP P+DL Q + +A L + +EADD+I + Sbjct: 64 LDKAGTSFRNDLYDQYKANRPPPPEDLVPQFPLIRDATRAFSLACIEEDALEADDLIASY 123 Query: 122 AREAEKAGRPVLISTGDKDMAQLVTPN------ITLINTMTNTILGPEEVVNKYGVPPEL 175 AR A G V I + DKD+ QLV I +++TM N + EVV K+GVPPE Sbjct: 124 ARAATLRGWDVTIVSSDKDLMQLVGKCATGGGCIDMLDTMKNQRIDIPEVVEKFGVPPEK 183 Query: 176 IIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAK 235 + D LALMGDS DN+PG+ G+G KTA L+Q G L++ A A + Sbjct: 184 VGDVLALMGDSVDNVPGIRGIGPKTATKLIQEHGDLESALAAA------PTMKAGKLRES 237 Query: 236 LEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGK 295 L + E+A LS L +K D L + E ++ Q + L +++ F ++ GK Sbjct: 238 LIEQAEMARLSRVLVALKEDCPLPVPIEDFKLGQIPRDPLAAFLEEHGFTSLLRRLDDGK 297 Query: 296 WLQAKGAKPAAKPQETSVADEAPEVTATVI------SYDNYVTILDEETLKAWIAKLEKA 349 + + A APE + Y + L+ WIA+ +A Sbjct: 298 GSPGPKTQLNPAKPDNKAAPAAPEGNRQALPSWPAPDLSAYACVQSMGELQQWIARAFEA 357 Query: 350 PVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDA----PDQISRERALELL 405 V A DTET +LD + A+LVG+S A+ P A YIP+ H D P Q+ R AL L Sbjct: 358 RVVAIDTETSALDAMRADLVGVSLALGPNDACYIPLGHGGSDMFAEKPLQVDRAEALAAL 417 Query: 406 KPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAG-----RHDMDS 460 KPLLE + LKVGQN+KYD ILA GI + DTM+ S+ L++ H MD Sbjct: 418 KPLLESDAVLKVGQNIKYDLNILARQGIMVS-PIDDTMVMSFCLDAGRSETGLAGHGMDE 476 Query: 461 LAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHK 520 L+ER L H T+ F+E+ G GK ++F ++ L +A RYAAEDADVT +LH P L Sbjct: 477 LSERHLLHTTMKFKELCGTGKKAISFAEVPLADATRYAAEDADVTWRLHRLFQPRLAGEG 536 Query: 521 GPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNL 580 G +++ ++ PL+PV++ +ERNG+K+D + L S E ++A LE HE G F + Sbjct: 537 G-TRIYQKVDRPLIPVVAMMERNGIKVDRERLSGLSTEFAAQIARLEGVIHEKCGMSFTI 595 Query: 581 SSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALD-YPLPKVILEYRGLAKLKST 639 S KQL +LF+K G K KK G ST + VLE LA + ++LE+R L+KLKST Sbjct: 596 GSPKQLGEVLFDKLGYKGGKKGKTGQYSTDQSVLEGLAAQGAEVATLVLEWRQLSKLKST 655 Query: 640 YTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY 699 YTD L INP TGRVHTSY TGRLSS +PNLQNIP+R E GR+IR AF+A Sbjct: 656 YTDALQAAINPHTGRVHTSYSLVGAQTGRLSSNEPNLQNIPIRTEIGRQIRDAFVAEPGN 715 Query: 700 VIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKA 759 V+++ADYSQIELR+ AH++ L AFA G+DIH TA E+FG V + R AK Sbjct: 716 VLLAADYSQIELRLAAHMADVPALKEAFAAGEDIHARTAMEMFGT----VDRDTRGRAKT 771 Query: 760 INFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLD 819 INF ++YG+S +GL +L + EAQ +D YFER+PG+ Y+ T +E+GY ETL Sbjct: 772 INFAILYGISRWGLGGRLGVSADEAQAMIDRYFERFPGIQRYIHETLESVRERGYSETLF 831 Query: 820 GRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPR-VRMIM 878 GR+ + P I S N A R +ERAAINAP+QGT+ADIIKRAM + L VRM++ Sbjct: 832 GRKTWFPRISSKNQAERQGSERAAINAPIQGTSADIIKRAMARMMPALTEAGLGHVRMLL 891 Query: 879 QVHDELVFEVHKDDVDAVAKQIHQLM----ENCTRLDVPLLVEVGSGENWDQAH 928 QVHDELVFE+ + DV+A I ++M E +L VPL VE+G+G +W AH Sbjct: 892 QVHDELVFELPQGDVEAAKPVIERVMATAAEPAVKLSVPLGVEIGTGLSWGAAH 945 >UniRef50_Q04Q27 DNA-directed DNA polymerase n=4 Tax=Leptospira RepID=Q04Q27_LEPBJ Length = 921 Score = 996 bits (2575), Expect = 0.0, Method: Composition-based stats. Identities = 383/932 (41%), Positives = 559/932 (59%), Gaps = 22/932 (2%) Query: 7 NPLILVDGSSYLYRAYHAF--PPLTNSA-GEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 L+++DG ++++RAY+AF LTNS G+P+GA +G ML L+ Y PTH A+ FD Sbjct: 2 KRLLIIDGHAFVFRAYYAFGASNLTNSKTGKPSGATFGFFKMLFKLLQDYTPTHVAMTFD 61 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 G R + FE YK++R PMP+DLR QI+ + ++ +G +L + G EADD+IGTL Sbjct: 62 PGGPLERGKTFEDYKANRKPMPEDLRPQIKEVMETLEKIGFKVLKMEGHEADDIIGTLCE 121 Query: 124 EAEKAGRPVLISTGDKDMAQLVTP-NITLINTMTNT----ILGPEEVVNKYGVPPELIID 178 + +LI +GDKD+ QL+ NI ++ + V + G+ + I D Sbjct: 122 TYRTIAKEILIFSGDKDLYQLLEKKNIKMLRGKKGVTEFVEIDSAWVKEELGIDVKQIPD 181 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 ++ ++GD+SDNIPGV G+G+K A LLQ LD +Y KI ++ KL + Sbjct: 182 YMGIVGDTSDNIPGVKGIGDKGASKLLQEYKTLDGIYKNLNKIKN------PSIQTKLSE 235 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 KE AYLS QLATI+ D++L +T + +E ++ + FK + + D+ + Sbjct: 236 QKENAYLSKQLATIRRDLKLGITEKDIETPDYKSDHAIVYFKSQGYNVLSKDLAKSAGKE 295 Query: 299 AKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTET 358 A+ + + + A T V Y I E L L K+ V + DTET Sbjct: 296 VPKD---AEVTDATADESAETKTIPVGEKGTYKLITTVEELSKICRGLPKSRVLSVDTET 352 Query: 359 DSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQI-SRERALELLKPLLEDEKALKV 417 S + A L+G+SF+ + Y+ V + D+ S E E L P+L + KV Sbjct: 353 TSPNPAMAELLGISFSNQEKTGFYVSVKNSASLFQDKSFSLEEIREHLGPVL-SSQVPKV 411 Query: 418 GQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIA 477 GQN+KYD +L N+G L I FDTML SY++ RH+MD LA+ L + TIT++++ Sbjct: 412 GQNIKYDLIVLENHGFILNNIQFDTMLASYVIQPEGRRHNMDVLAKDLLNYDTITYDDLV 471 Query: 478 GKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVL 537 G GK + I E+ YAAEDAD+T +L+ + K G + NIEMPL+ VL Sbjct: 472 GTGKKKKELTDIDPEQVAEYAAEDADITFRLYQIFRKKI-KESGVEPILRNIEMPLISVL 530 Query: 538 SRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIK 597 +++E+ G+ +D + + + LE + H AG FN++STK+LQ ILF+ +K Sbjct: 531 AKMEKTGIALDVPYFEELARDFDREIRHLESEIHRQAGRSFNIASTKELQKILFDDLKLK 590 Query: 598 PLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHT 657 +KKT G ST EVLEEL ++P+ + +L+YR KLKSTY D LP M+NP+TGR+HT Sbjct: 591 TVKKTQTG-YSTDHEVLEELLGEHPIVEKLLDYRKYTKLKSTYVDALPKMVNPRTGRIHT 649 Query: 658 SYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQIELRIMAH 716 SY+Q + ATGRLSSTDPNLQNIP+R+ EGR +R+ F ++Y I+S DYSQIELRIMAH Sbjct: 650 SYNQTIAATGRLSSTDPNLQNIPIRDREGRLLRKGFTVDSDEYEILSLDYSQIELRIMAH 709 Query: 717 LSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQ 776 +S+D +L A+ G DIH TAA ++G+P + VT E R AK +NF +IYG++ +GL+R Sbjct: 710 ISKDPAMLEAYNHGLDIHIRTAAALYGVPEKEVTPEMRDKAKVVNFSVIYGVTPYGLSRN 769 Query: 777 LNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARR 836 L IPR EA+ +++ Y +YPGV YM+ A++ GYV+TL GRR + DI S++ + + Sbjct: 770 LRIPRDEAKSFIERYMIQYPGVKSYMDSMVEFAEKNGYVQTLTGRRRPIVDINSTHKSAK 829 Query: 837 AAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAV 896 AA+R AIN+P+QGT+AD+IK AMI + ++ + R RM++QVHDELVFEVHK + + Sbjct: 830 EAAKRVAINSPVQGTSADMIKIAMINIHEDIEKKHYRSRMLLQVHDELVFEVHKKEKEEF 889 Query: 897 AKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 + + MEN LD+P+LVE G NWD+AH Sbjct: 890 KISMKKHMENAMPLDLPILVEGKFGVNWDEAH 921 >UniRef50_B0SCM1 DNA-directed DNA polymerase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SCM1_LEPBA Length = 942 Score = 996 bits (2575), Expect = 0.0, Method: Composition-based stats. Identities = 390/948 (41%), Positives = 575/948 (60%), Gaps = 34/948 (3%) Query: 7 NPLILVDGSSYLYRAYHAF--PPLTNSA-GEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 L+++DG + +RAY AF LTNS G P+GA++G ML L+ TH A FD Sbjct: 3 GRLLIIDGHALAFRAYFAFAASNLTNSKTGLPSGAIFGFWRMLFKLLQDEHVTHIAFTFD 62 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 + R++L+E YK+HR PMP+DL+ QI+ ++ M++A+ P+ ++G+EADD+IG+L + Sbjct: 63 PGTRLERNDLYEEYKAHRKPMPEDLKPQIQKIYEMLQALEFPMYKINGIEADDIIGSLCK 122 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDF 179 + K ++I + DKD+ Q++ NI ++ + P+ V G+ E + D+ Sbjct: 123 KFGKDFEEIVILSSDKDLYQVLDKNIHMLRGKRGVSEFEKIDPKWVKTNIGITKEQVTDY 182 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 +AL+GD+SDNIPGV G+GEK A L+Q G L+T+Y + +K+ K++ KL + Sbjct: 183 MALLGDASDNIPGVKGIGEKGAAKLIQEFGDLETIYKKIDKVKN------KSLIDKLIAD 236 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 KE A+LS +LATI T+++L++ L++ + + FK + D+ + Sbjct: 237 KENAFLSRKLATIVTNLKLDIKKSDLKLPNYYDPKKVQYFKDEGYNVLHRDLAKQAGIPI 296 Query: 300 KGAKPAAKPQETS------------------VADEAPEVTATVISYDNYVTILDEETLKA 341 A + ETS + +V++ +Y I + LK Sbjct: 297 VSDGDAKEESETSKKTTKGKKESNTEASADGSKKGKTDAATSVVAKKSYKRIQSIDELKK 356 Query: 342 WIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQIS-RER 400 ++KL + DTET S D + A L+G+SF+ EPGVA YI +H + E Sbjct: 357 IVSKLNSKKPISIDTETTSQDPMMAELLGISFSEEPGVAYYIAFSHSESIYSHLLPSAEE 416 Query: 401 ALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDS 460 +L++LKP+LED K+GQN+KYD +L NYGIEL+GI FDTML SY+LN RH+MD Sbjct: 417 SLKILKPMLEDSNWKKIGQNIKYDLLVLKNYGIELKGIYFDTMLASYLLNPGERRHNMDD 476 Query: 461 LAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHK 520 +A +L +KTIT+EE+ G GK + I ++ YA EDAD+TLQLH + P + ++ Sbjct: 477 MAVDYLNYKTITYEELVGTGKKKQNLYDIDPDKVSEYACEDADITLQLHNVLSPKMDEN- 535 Query: 521 GPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNL 580 +F +EMP++ L+ +E G+ +D + S ++ E EK H AG +FN+ Sbjct: 536 IHKKLFYEMEMPVLLTLADMEFEGIAVDKSYFESLSGTFDTKIKEHEKNIHFYAGRQFNV 595 Query: 581 SSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTY 640 +STK+LQT+LFE + KKT G ST VLE L +P+ +L R +KLKSTY Sbjct: 596 NSTKELQTVLFEDLRLPAEKKTQTG-YSTDHSVLESLQGTHPIIDDLLSIRKFSKLKSTY 654 Query: 641 TDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYV 700 TD LPL++NPKT R+HTSY+Q + ATGRLSST+PNLQNIP+++EEGR +R+ FIA + Y Sbjct: 655 TDTLPLLVNPKTKRIHTSYNQTIAATGRLSSTNPNLQNIPIKDEEGRLLRKGFIAKKGYE 714 Query: 701 IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAI 760 I+S DYSQIELRIMAH S D ++ A+ G DIH+ TAA +FG+P + VT + R AK + Sbjct: 715 ILSLDYSQIELRIMAHFSNDPNMIDAYNSGADIHKRTAAGIFGVPEDQVTPDMRNKAKVV 774 Query: 761 NFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDG 820 NF +IYG+++FGL+ L I RKEA+++++ YF Y GV YME K+ GYVETL G Sbjct: 775 NFSVIYGVTSFGLSNNLRISRKEAKEFIEKYFAAYKGVATYMEEIVEFCKQNGYVETLLG 834 Query: 821 RRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQV 880 RR YLPDI SS+ A+R AIN+P+QGT+AD+IK AMI + ++ E R ++++QV Sbjct: 835 RRRYLPDIHSSHKMVSEGAKRVAINSPIQGTSADMIKIAMIQIHEKIKKESFRSKLLLQV 894 Query: 881 HDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 HDELVFEV + + + ME+ +L VP++V+ G NWD+AH Sbjct: 895 HDELVFEVDPKEKKEFFQMAKEEMESAMKLKVPIVVQGKFGGNWDEAH 942 >UniRef50_Q11NX3 DNA polymerase I n=11 Tax=Bacteria RepID=Q11NX3_CYTH3 Length = 946 Score = 995 bits (2573), Expect = 0.0, Method: Composition-based stats. Identities = 392/961 (40%), Positives = 552/961 (57%), Gaps = 55/961 (5%) Query: 7 NPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 L L+D + +YRA+ AF P S G TGA++G N L ++++ KPTH V FD Sbjct: 2 KKLFLLDAMALIYRAHFAFSKNPRVTSTGISTGAVFGFTNSLLEILLKEKPTHIGVAFDL 61 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 +G TFR + F YK++R P+D+ I ++ +++ M +P+L V G EADD++GT ++ Sbjct: 62 QGPTFRHDNFTEYKANRQEQPEDISVAIPYIYRLLEGMNIPILGVPGYEADDIVGTFSKI 121 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGV-PPELIIDF 179 A G V + T DKD QLV ++ L I +V+ K+ + + + D Sbjct: 122 APPLGFDVYMMTMDKDYMQLVNEHVFLYRPAYMGNDVEIYDINKVLAKFNIKEVDQVRDI 181 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 L L GD+ DNIPG+PG+GEKTAQ L+ G ++ L +++ G + Sbjct: 182 LGLQGDTVDNIPGIPGIGEKTAQKLIADFGSVENLIKNADQLKG-------KQKENVINF 234 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 LS +LATI +V +E E L V++ E L LF + EF+ + + Sbjct: 235 AAQGLLSKELATIHCEVPIEFDEEALRVKEYNIEALDQLFDELEFRTLKKRLFGNSSSAS 294 Query: 300 KGAKPAAKPQETSVA-----------------------DEAPEVTATVISY------DNY 330 + K A DE E T++ +Y Sbjct: 295 ETEKKMETKATKKSAAVSSTGQMGLFGMEAAETITEEFDEKGESKETIVRDTIDTVLHDY 354 Query: 331 VTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYL 390 + E + L F FDTET SL+ + A LVGL+ + A YIP Sbjct: 355 YVVDTEAEIVRLTNLLLLQESFCFDTETTSLNALEAELVGLAISFRAKEAYYIPF----- 409 Query: 391 DAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILN 450 DQI +R L+LL+P E KVGQNLKYD +L Y + G FDTML Y+L Sbjct: 410 -TSDQIQTQRILDLLQPAFEKSSITKVGQNLKYDLLVLKKYNFAIAGPLFDTMLAHYLLE 468 Query: 451 SVAGRHDMDSLAERWLKHKTITFEEIAGK-GKNQLTFNQIALEEAGRYAAEDADVTLQLH 509 RH MD+LAE +L + ++ E++ GK G Q T + +E YAAEDAD+T QL+ Sbjct: 469 P-EMRHGMDTLAEVYLNYTPVSIEQLIGKKGAKQGTMRDVEIEAIKEYAAEDADITFQLY 527 Query: 510 LKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKK 569 P L K + +F +EMPL VL+ +E GVKID + L S L + +EK+ Sbjct: 528 KFFSP-LVKDQNLNPLFNEVEMPLSEVLADMELEGVKIDTQALSEFSSLLQTEITAVEKE 586 Query: 570 AHEIAGEEFNLSSTKQLQTILFEKQGIKPL-KKTPGGAPSTSEEVLEELALDYPLPKVIL 628 +E AG +FN+SS KQL ILF+K + P KKT G +T E+VL +L D+P+ IL Sbjct: 587 IYEHAGVQFNISSPKQLGEILFDKLKLDPNAKKTKTGQYATGEDVLTKLDSDHPILANIL 646 Query: 629 EYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRR 688 +YR KLKSTY D LPL++ K GRVHTS++QAV ATGRLSST+PNLQNIP+R + G+ Sbjct: 647 DYREFQKLKSTYVDALPLLL-GKDGRVHTSFNQAVAATGRLSSTNPNLQNIPIRTDRGKE 705 Query: 689 IRQAFIAPED-YVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLE 747 IR+AF+A ++ +VI+SADYSQIELRIMA S+D+ +L AF +G DIH TA++VF +P+E Sbjct: 706 IRRAFVARDNDHVILSADYSQIELRIMAAFSKDESMLNAFRKGVDIHSTTASKVFKVPIE 765 Query: 748 TVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRA 807 VT++ RR AK +NFG+IYG+SAFGL+++L+IPRKEA + + YF +P V YM+ Sbjct: 766 DVTADMRRKAKMVNFGIIYGISAFGLSQRLSIPRKEAAEIITAYFTEFPAVKAYMDACVN 825 Query: 808 QAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWL 867 A+E YVET+ GRR +L DI S N R AER AINAP+QG+AAD+IK AMI + W+ Sbjct: 826 SAREVEYVETILGRRRFLRDINSRNMTMRGFAERNAINAPIQGSAADMIKVAMIRIHDWM 885 Query: 868 QAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 + E + +M++QVHDEL+F+ HKD++D + Q+ M+ LDVP+ V +G GENW +A Sbjct: 886 KKENLKSKMVLQVHDELLFDAHKDEIDLLKTQVEIFMKEAIALDVPMEVGMGIGENWLEA 945 Query: 928 H 928 H Sbjct: 946 H 946 >UniRef50_UPI0001744922 DNA polymerase I n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744922 Length = 971 Score = 994 bits (2571), Expect = 0.0, Method: Composition-based stats. Identities = 393/986 (39%), Positives = 546/986 (55%), Gaps = 73/986 (7%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHA 58 M Q L L+D + LYRA+ A P+ S G T A++G N L ++ KPTH Sbjct: 1 MPQSQPQRLFLLDSMALLYRAHFALIRKPIFTSDGVNTSALFGYANALLDILQNQKPTHL 60 Query: 59 AVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVI 118 FD T R +F YK+ R MP+DL I ++KAM +P+L V G EADD+I Sbjct: 61 GAAFDTSAPTPRHTMFPAYKAQREEMPEDLSVAIPAAKRLLKAMRIPVLEVDGWEADDII 120 Query: 119 GTLAREAEKA-GRPVLISTGDKDMAQLVTPNITLINTMT----NTILGPEEVVNKYGVP- 172 GTLA AE G + T DKD QLVT N + ILG +EV ++GV Sbjct: 121 GTLAHHAEARGGFETYMVTPDKDFGQLVTENTLIYKPGRQGADTEILGVKEVCERWGVSN 180 Query: 173 PELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTM 232 P +ID L LMGD+SDNIPG+ GVGEKTA L+Q G ++ + ++I G + Sbjct: 181 PGQVIDLLGLMGDASDNIPGIAGVGEKTAAKLIQQFGSVEAMLDRVDEIEG-------KL 233 Query: 233 AAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVE 292 K++ E+A +S QLATI D L + + L + E L + ++EF + Sbjct: 234 KDKVKAGAEMARISKQLATIMVDAPLTVQLDDLALLGFDEEALKSILVEFEFNALGRRLF 293 Query: 293 AGKWLQAKGAK--------------------------------------------PAAKP 308 + +G + A Sbjct: 294 GDDFKAGRGRQLGGGVAPVSAPAPPAKKSKGGDLQGDLFGAGAETIPVAAAGDEGSAEAM 353 Query: 309 QETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANL 368 + + A P + Y + + +AW+ KL F FDTETD LD +SA + Sbjct: 354 ADAAAAPHLPGLKTIRDIPHRYELVKTADERRAWLEKLAGVDAFCFDTETDGLDPLSARM 413 Query: 369 VGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGIL 428 +G++F+I P Y + + + L+ +K L KA K+G NLK+D + Sbjct: 414 LGIAFSIAPHEGCYFHIPEERDEHL------AVLKEVKTFLSTSKAEKIGHNLKFDLRVF 467 Query: 429 ANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN---QLT 485 +GIE+ G FDTML ++ RH MD L+ER+L + ++ + G+ K Q + Sbjct: 468 LAHGIEVAGPFFDTMLVHALVEPDQ-RHGMDYLSERYLGYSPVSITTLIGEKKGATPQKS 526 Query: 486 FNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGV 545 ++ LE YAAEDADVTLQL K+ P+L++ G + VF IE PL+PVL+ +E GV Sbjct: 527 MAEVPLEPLAEYAAEDADVTLQLSQKLRPELERL-GLMKVFYEIEAPLLPVLAHMEHEGV 585 Query: 546 KIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG-IKPLKKTPG 604 K+D L +EL + L ++ FNL+S KQL +LF+ ++ KKT Sbjct: 586 KVDVPTLEEFGQELLSQANVLRERIQGYVDWPFNLNSPKQLGEVLFDHLKLMEKPKKTAT 645 Query: 605 GAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVT 664 G T+E+ L L +P+ IL YR KLKSTY D LP +NP T RVHT++HQ + Sbjct: 646 GQYQTNEQTLLTLQGRHPIIDDILAYRECTKLKSTYVDALPAAVNPLTHRVHTTFHQLMA 705 Query: 665 ATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIELRIMAHLSRDKGL 723 ATGR++STDPNLQNIP+R ++GR IR+AF+ E +V++SADYSQIELR+MA LS D + Sbjct: 706 ATGRMASTDPNLQNIPIRTDQGREIRKAFVPEKEGWVLMSADYSQIELRVMAELSADPAM 765 Query: 724 LTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLN-IPRK 782 + AF EG DIH+ATAA+V+G+ L+ V E RR+AK +NFG+IYG+SAFGL+++L R Sbjct: 766 MEAFQEGHDIHQATAAKVYGVALDEVLPEMRRTAKMVNFGIIYGISAFGLSQRLGNTSRT 825 Query: 783 EAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERA 842 EA + ++ YF++YPGV YME QA+ QGYVETL GRR YL DI SSN R+A ER Sbjct: 826 EAAQIIENYFKQYPGVKRYMEDIVTQARTQGYVETLTGRRRYLRDINSSNMTVRSATERV 885 Query: 843 AINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQ 902 A+NAP+QGTAAD+IK AM+ V L+ + RM++QVHDEL+FEV ++VD V I Q Sbjct: 886 AMNAPIQGTAADMIKLAMVNVARSLREGGFKTRMLLQVHDELLFEVPLEEVDKVKPVIEQ 945 Query: 903 LMENCTRLDVPLLVEVGSGENWDQAH 928 M L VP+LVE G+G+ W +AH Sbjct: 946 GMREALPLKVPVLVEAGTGKTWLEAH 971 >UniRef50_O34996 DNA polymerase I n=38 Tax=Bacteria RepID=DPO1_BACSU Length = 880 Score = 992 bits (2564), Expect = 0.0, Method: Composition-based stats. Identities = 367/927 (39%), Positives = 525/927 (56%), Gaps = 56/927 (6%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 + L+LVDG+S YRA+ A P L+N G T A+YG +L ++ KPTH V FDA Sbjct: 4 RKKLVLVDGNSLAYRAFFALPLLSNDKGVHTNAVYGFAMILMKMLEDEKPTHMLVAFDAG 63 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 TFR F+ YK R P +L Q+ + ++ A + + EADD+IGTLA+ A Sbjct: 64 KTTFRHGTFKEYKGGRQKTPPELSEQMPFIRELLDAYQISRYELEQYEADDIIGTLAKSA 123 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLA 181 EK G V + +GDKD+ QL T T+ T PE V KYG+ PE IID Sbjct: 124 EKDGFEVKVFSGDKDLTQLATDKTTVAITRKGITDVEFYTPEHVKEKYGLTPEQIIDMKG 183 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGDSSDNIPGVPGVGEKTA LL+ ++ L ++++G K + KLE+ K+ Sbjct: 184 LMGDSSDNIPGVPGVGEKTAIKLLKQFDSVEKLLESIDEVSG------KKLKEKLEEFKD 237 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 A +S +LATI TD +E++ LE Q E+++ +FK F + Sbjct: 238 QALMSKELATIMTDAPIEVSVSGLEYQGFNREQVIAIFKDLGFNTLLERLGE-------- 289 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 D A + N T+ D + AF E Sbjct: 290 -------------DSAEAEQDQSLEDINVKTVTD-------VTSDILVSPSAFVVEQIGD 329 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 + ++G S E G A +IP E+ K +E+++ K + Sbjct: 330 NYHEEPILGFSIVNETG-AYFIP-----------KDIAVESEVFKEWVENDEQKKWVFDS 377 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 K L GIEL+G FDT+L +YI+N D+ S+A+ + H + E + GKG Sbjct: 378 KRAVVALRWQGIELKGAEFDTLLAAYIINPGNSYDDVASVAKDYGLHIVSSDESVYGKGA 437 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 + ++ + + A L K+ +L ++ L +FE +EMPL +L +E Sbjct: 438 KRAVPSE---DVLSEHLGRKALAIQSLREKLVQEL-ENNDQLELFEELEMPLALILGEME 493 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 GVK+D L EEL +L E E+K HEIAGE FN++S KQL ILFEK G+ +KK Sbjct: 494 STGVKVDVDRLKRMGEELGAKLKEYEEKIHEIAGEPFNINSPKQLGVILFEKIGLPVVKK 553 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 T G STS +VLE+LA + + IL+YR + KL+STY + L + P + +VHT ++Q Sbjct: 554 TKTG-YSTSADVLEKLADKHDIVDYILQYRQIGKLQSTYIEGLLKVTRPDSHKVHTRFNQ 612 Query: 662 AVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIELRIMAHLSRD 720 A+T TGRLSSTDPNLQNIP+R EEGR+IRQAF+ +D++I +ADYSQIELR++AH+S+D Sbjct: 613 ALTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSEKDWLIFAADYSQIELRVLAHISKD 672 Query: 721 KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 + L+ AF DIH TA +VF + + VTS RR AKA+NFG++YG+S +GL++ L I Sbjct: 673 ENLIEAFTNDMDIHTKTAMDVFHVAKDEVTSAMRRQAKAVNFGIVYGISDYGLSQNLGIT 732 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 RKEA ++D Y E + GV YME + +AK++GYV TL RR Y+P++ S N R+ AE Sbjct: 733 RKEAGAFIDRYLESFQGVKAYMEDSVQEAKQKGYVTTLMHRRRYIPELTSRNFNIRSFAE 792 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 R A+N P+QG+AADIIK+AMI + A L+ +Q + R+++QVHDEL+FE K++++ + K + Sbjct: 793 RTAMNTPIQGSAADIIKKAMIDMAAKLKEKQLKARLLLQVHDELIFEAPKEEIEILEKLV 852 Query: 901 HQLMENCTRLDVPLLVEVGSGENWDQA 927 ++ME+ LDVPL V+ SG +W A Sbjct: 853 PEVMEHALALDVPLKVDFASGPSWYDA 879 >UniRef50_D1CFH6 DNA polymerase I n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFH6_THET1 Length = 930 Score = 991 bits (2562), Expect = 0.0, Method: Composition-based stats. Identities = 370/942 (39%), Positives = 551/942 (58%), Gaps = 43/942 (4%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAFP-PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAA 59 M + ++L+D S +YRAYHA P L S GE T A+YG NML +I + P A Sbjct: 1 MNEGCAVKVVLIDAYSLIYRAYHALPSDLATSKGEKTNAIYGFCNMLVQVINRENPDSIA 60 Query: 60 VVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIG 119 V FD GK FR + F YK+ R PMPDDL+AQI + ++ A +P+ V G EADDVIG Sbjct: 61 VAFDV-GKAFRHDEFVEYKAQRAPMPDDLQAQIGRVRQVIAAFDIPVYEVPGYEADDVIG 119 Query: 120 TLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNT-----ILGPEEVVNKYGVPPE 174 +LA++ G V+I TGDKD QLV+ +++++ + P+ V +YG P Sbjct: 120 SLAKKLSSQGHQVVIVTGDKDFLQLVSDSVSVVLPARGRFSEVQVYTPDLVRLQYGFDPR 179 Query: 175 LIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAA 234 I+DF ALMGD+SDNIPGVPGVGEKTA++L+Q G L + + I + + Sbjct: 180 YIVDFKALMGDASDNIPGVPGVGEKTARSLIQTFGSLQNILENVDSIK------PERIRN 233 Query: 235 KLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAG 294 +++++ + +LATI TD+++++ P +++ +F++ EF+ + Sbjct: 234 AIKEHQSQLIQNLRLATIVTDIDVDIEPVISHAWAPDMQKVNEIFRELEFRSLMYRLPKY 293 Query: 295 KWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAF 354 Q ++ A E + Y + D+E+L+ + +L AF Sbjct: 294 FEPQNTSSEKVASV----------ERNEQPQIQEKYEIVSDQESLRRLVRELLAKEYIAF 343 Query: 355 DTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKA 414 DTET + + ++LVG+SF+ + G+A Y+P+ + + L+ L PLLE Sbjct: 344 DTETSGKNVMESDLVGVSFSPKAGIAYYVPI-----NGFSDDGTKDLLDELSPLLE-GGP 397 Query: 415 LKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFE 474 K+ N K+D L +GI + + FDT + +++LN + LA L + T + Sbjct: 398 KKIAHNAKFDYMALYKHGIRVSPLYFDTSIAAFLLN--ETSVGLKDLAATRLGIQMTTID 455 Query: 475 EIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLV 534 + GKGKNQ T +++++E RYA DAD+T +L + ++ + + ++F +EMPLV Sbjct: 456 SLIGKGKNQKTMLEVSVDECARYACADADMTFRLFTMLEKEIVE-RKLQDLFYTLEMPLV 514 Query: 535 PVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQ 594 PVL+ +E GV ID L + S +L ++ ++E + +EIAG EFNL S +QL LF+ Sbjct: 515 PVLADMEMTGVAIDADALKSLSTKLYEQIRDIESQIYEIAGYEFNLKSPQQLSKFLFQDL 574 Query: 595 GIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGR 654 G+K ++KT G ST LE L+ +P+ +IL YR L KLK TY D LPLM++ TGR Sbjct: 575 GLKGIRKTSKG-YSTDAATLEALSGQHPVIDLILSYRQLTKLKDTYVDALPLMVSRSTGR 633 Query: 655 VHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA----------PEDYVIVSA 704 +HT++ Q TGRL+S+DPNLQNIP+R+ G+ +R+AF+A E V++SA Sbjct: 634 LHTNFSQTSAVTGRLASSDPNLQNIPIRSSLGKEVRKAFVAGSPEKNNAIFDEPSVLLSA 693 Query: 705 DYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGL 764 DYSQIELR++AH++ + L AF+ DIH TA+ +FG+P+E+V RR K INFG+ Sbjct: 694 DYSQIELRVLAHVTDEPKLKEAFSRDIDIHALTASRLFGVPIESVDDNMRRMGKTINFGI 753 Query: 765 IYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLY 824 IYGMS F LAR + ++EA ++ Y +++P V Y E+ +A+++GYVET GRR Y Sbjct: 754 IYGMSGFRLARDTGLEQREANLFVKRYMDQFPRVKAYFEQLIKEAEKKGYVETPLGRRRY 813 Query: 825 LPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDEL 884 LPDI SSN RR AA RAAIN P+QG AADIIK+AMI V + L+ E + +MI+QVHDEL Sbjct: 814 LPDITSSNPQRREAARRAAINMPIQGMAADIIKQAMIDVHSALEREGIKAKMILQVHDEL 873 Query: 885 VFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 +FEV + +D A+ I + M L VPL+VE G NW + Sbjct: 874 LFEVAESQLDRAAEVIVREMSTAFDLSVPLVVEAEYGPNWGE 915 >UniRef50_C5CIW2 DNA polymerase I n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CIW2_KOSOT Length = 896 Score = 990 bits (2559), Expect = 0.0, Method: Composition-based stats. Identities = 366/927 (39%), Positives = 536/927 (57%), Gaps = 42/927 (4%) Query: 7 NPLILVDGSSYLYRAYHAFP-PLTNSAGEPTGAMYGVLNMLRSLIMQYKP--THAAVVFD 63 N L L DG++ +YRAY A LTNS GEPT A+YG ML I Y +A FD Sbjct: 3 NRLFLFDGTAIVYRAYFAIDVSLTNSKGEPTNAVYGTARMLSRFIKNYIAEGDYALFAFD 62 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 K T R +LFE YK+ R MPD L AQ++ + +V+ G+ +V+ +EADD+I T Sbjct: 63 RKEATHRHDLFEGYKATRAEMPDALVAQLKYIPDLVEGFGIKFHSVATLEADDIIATAVT 122 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDF 179 + ++I +GDKD+ QLV + ++ ++ +V K+G+PPE I + Sbjct: 123 KYRDKFDEIVIVSGDKDILQLVDEKVKVLRFVSGLTDLEEYDRRKVEEKFGLPPEKIYEL 182 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 L+L GD+SDNIPGVPG+G KTA LL+ G +D +Y K++ + KL Sbjct: 183 LSLCGDTSDNIPGVPGIGIKTALKLLKEYGSIDEIYKNIRKLS-------PGLRKKLMDG 235 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 K+ +S +L + TD +L + E+L + E+L LF K EF + Sbjct: 236 KKALEMSKKLVRLVTDADLHIELEELRYRGLDKEKLRELFLKLEFASLLREF-------- 287 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 + + + + Y + ++ L L+ + V + D ET Sbjct: 288 ----------------DLTNLGSDNNEDNGYRPVSSQQELDELFETLKGSDVISIDLETS 331 Query: 360 SLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQ 419 SLD A +VG+S AI+ G YIPV H+ D Q ++ L LK LLED VGQ Sbjct: 332 SLDPHEAKIVGISVAIKDGEGFYIPVNHESSD--WQADEKQVLLRLKELLEDSGTKIVGQ 389 Query: 420 NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 NLK+D IL +GIE FDTM+ +Y+LN + R ++D LA ++L ++T +F E+ K Sbjct: 390 NLKFDYEILEKHGIEPVVPHFDTMIAAYLLNPDSRRFNLDDLALKFLGYRTTSFSELMNK 449 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 + + F ++++EEA +Y+ EDAD+ L+L+ + L + N+F IEM L+PVL+ Sbjct: 450 NQLKDQFEKVSVEEAAKYSVEDADIALRLYRVLSKKLYESD-LDNIFHKIEMELIPVLAE 508 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 +E NGV ++ + L N SEE RL ++ ++ E+AGE FN +S Q+ ILFEK G+ P Sbjct: 509 LELNGVYMNVESLKNLSEEYEKRLGKIREELFELAGEPFNPNSPTQVSKILFEKLGLNPP 568 Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 KKT GA STS VLEEL ++P+ + +L+YR KLKSTY D LP ++NP TGR+H SY Sbjct: 569 KKTKHGAYSTSAAVLEELVNEHPIIQKLLDYRKYQKLKSTYLDTLPTLVNPVTGRIHASY 628 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE-DYVIVSADYSQIELRIMAHLS 718 HQ T TGRLSS++PN+QN+P++ EEG+ IR+ + + D+ I+SADYSQIELR++AH S Sbjct: 629 HQTGTGTGRLSSSNPNMQNLPIKGEEGKEIRKCVVPQKSDWKIISADYSQIELRVLAHFS 688 Query: 719 RDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLN 778 D+ L++AF G+D+H TA+ ++G+ ++ VT E R+ K +NF +IYG+S +GLAR+L Sbjct: 689 EDERLISAFKNGEDVHALTASRLYGVSVKDVTPEMRQVGKMVNFSIIYGISPYGLARRLK 748 Query: 779 IPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAA 838 I A+ + YF YPGV +++ +AKE+GYV TL GR+ +P ++ N + Sbjct: 749 IKTHIAENMISNYFNAYPGVRKFINEVIHEAKEKGYVRTLFGRKREIPHFRTRNKMKIQE 808 Query: 839 AERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAK 898 ER AIN P+QGTAADI+K AMI + ++ E I+QVHDELVFE +VD V Sbjct: 809 GERIAINTPIQGTAADIMKLAMIKIHKMVKEEGLEAFPILQVHDELVFEAPATEVDRVCD 868 Query: 899 QIHQLMENCTRLDVPLLVEVGSGENWD 925 + + M L VPL V+V W Sbjct: 869 ILTRGMSGVVELKVPLEVDVAVNSYWG 895 >UniRef50_A4YLA1 DNA polymerase I (POL I) n=63 Tax=cellular organisms RepID=A4YLA1_BRASO Length = 1034 Score = 989 bits (2557), Expect = 0.0, Method: Composition-based stats. Identities = 417/988 (42%), Positives = 571/988 (57%), Gaps = 74/988 (7%) Query: 7 NPLILVDGSSYLYRAYHAFPPL-TNSAGEPTGAMYGVLNMLRSLIMQY----KPTHAAVV 61 + + LVDGSSY++RAYHA PPL S G A+ G NML L+ +PTH A+V Sbjct: 55 DHVFLVDGSSYIFRAYHALPPLNRKSDGLNVNAVLGFCNMLWKLLRDMPETDRPTHLAIV 114 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 FD TFR++++ YK+HRPP PDDL Q + V+A LP L SG EADD+I T Sbjct: 115 FDKSEVTFRNQIYADYKAHRPPAPDDLIPQFALIREAVRAFDLPCLEQSGFEADDLIATY 174 Query: 122 AREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLA 181 AR A + G I + DKD+ QLV +T+ +TM + +G EV+ K+GVPPE +++ A Sbjct: 175 ARLACERGATTTIVSSDKDLMQLVNDCVTMYDTMKDRRIGTAEVIEKFGVPPEKVVEVQA 234 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 L GDS+DN+PGVPG+G KTA L+ G L++L +I L +N E Sbjct: 235 LAGDSTDNVPGVPGIGIKTAAQLINDYGDLESLLTRAAEIKQ------PKRREALIENAE 288 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 A +S QL + V LE+ + L V +P +L+ K EF T V + Sbjct: 289 KARISRQLVLLDDKVALEVPLDDLAVHEPDPRKLIAFLKAMEFSTLTRRVAEYSQIDPAD 348 Query: 302 AKPAAKPQETSVADEAPEVTAT-------------------------------------- 323 A+ + S AP ++ Sbjct: 349 VTADAQLKVGSSPAAAPTPSSPASGGGSAPSKPATAPRTGDPRIDKSAMGKGTPAGLAES 408 Query: 324 --------VISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAI 375 I D Y T+ LKA++A+ + D + S+D + ANL GLS A+ Sbjct: 409 RAEAAKSARIDRDKYQTLRSLPELKAFLARAHEFGRVTVDVKASSIDPMQANLCGLSLAL 468 Query: 376 EPGVAAYIPVAH----------DYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDR 425 PG A YIP+AH D APDQI AL LKP+LE LK+G N+K+ Sbjct: 469 APGEACYIPLAHRQAGDGGGLFDAGLAPDQIKESEALAALKPVLESTGLLKIGYNIKFLA 528 Query: 426 GILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLT 485 +LA +GI L+ D +L SY L++ G H +DSLAE L H I+ E+ G GKN+LT Sbjct: 529 VLLAQHGITLQN-VDDILLMSYALDAGRGSHKLDSLAEHVLAHAIISEGELIGSGKNKLT 587 Query: 486 FNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGV 545 F Q+A++ A +AAE ADV ++ + P L + V+E +E PLV VL+R+ER G+ Sbjct: 588 FEQVAIDRATAHAAEAADVIHRVWRVLKPRLTAER-MTAVYETLERPLVSVLARMERRGI 646 Query: 546 KIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGG 605 ID +VL S + A +E + E+AGE N+ S KQ+ ILF K G+ +T G Sbjct: 647 SIDRQVLSRLSGDFAQTAARVEAELQELAGEPINVGSPKQIGDILFGKMGLSGGTRTKTG 706 Query: 606 APSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVT 664 A STS +L++LA + ILE+R ++KLKSTYTD LP +NP+T RVHT+Y A T Sbjct: 707 AWSTSASILDDLAEQGNDFARKILEWRQVSKLKSTYTDALPTYVNPQTHRVHTTYALAAT 766 Query: 665 ATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLL 724 TGRLSS +PNLQNIPVR E+GR+IR+AFIA Y +VSADYSQIELR++A ++ L Sbjct: 767 TTGRLSSNEPNLQNIPVRTEDGRKIRRAFIATPGYKLVSADYSQIELRLLAEIADIPVLK 826 Query: 725 TAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEA 784 AF +G DIH TA+E+FG+P++ + SE RR AKAINFG+IYG+SAFGLA QL I R+EA Sbjct: 827 QAFKDGLDIHAMTASEMFGVPIKDMPSEVRRRAKAINFGIIYGISAFGLANQLGIAREEA 886 Query: 785 QKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAI 844 Y+ YFER+PG+ YM+ TR ++ GYV TL GR+ + P+IK+SN + RA ERAAI Sbjct: 887 SAYIKRYFERFPGIRAYMDETREFCRKNGYVVTLFGRKCHYPEIKASNASVRAFNERAAI 946 Query: 845 NAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLM 904 NA +QGTAADII+RAM V+ L ++ +M++QVHDEL+FEV +D+V A + +M Sbjct: 947 NARLQGTAADIIRRAMTRVEEALAQKKLSAQMLLQVHDELIFEVPEDEVAATLPVVQHVM 1006 Query: 905 EN----CTRLDVPLLVEVGSGENWDQAH 928 ++ L VPL V+ + +NWD+AH Sbjct: 1007 QDAPFPAVLLSVPLHVDARAADNWDEAH 1034 >UniRef50_B3TC83 Putative DNA polymerase family A n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC83_9ZZZZ Length = 891 Score = 985 bits (2548), Expect = 0.0, Method: Composition-based stats. Identities = 362/925 (39%), Positives = 518/925 (56%), Gaps = 40/925 (4%) Query: 5 PQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 L L+DG++ +YRAYHA LT G T A+YG + MLR L+ +P A FD Sbjct: 3 STPRLFLIDGNNQMYRAYHALHGLTGPDGRSTNAVYGFITMLRKLLSDQQPDLVAAAFDL 62 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 KG TFR EL YK+ R PMP+DL Q+ +H A+G+P++ +G EADDVIGTLA + Sbjct: 63 KGPTFRHELAADYKATRRPMPEDLVEQVSWVHEACAALGVPVVTHAGFEADDVIGTLATQ 122 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMT-NTILGPEEVVNKYGVPPELIIDFLALM 183 A AG V++ TGDKD QLV I + N V+ K+GV P+ ++D LALM Sbjct: 123 AVAAGLEVVVVTGDKDFFQLVGDRIRVFNPRDEGAWYDDAGVLEKFGVRPDQVVDVLALM 182 Query: 184 GDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVA 243 GD+SDN+ GVPG+GEK A+ LL G LD L +++ K L ++ + A Sbjct: 183 GDASDNVKGVPGIGEKGARELLADFGSLDWLLDHADELP------KKKYRTALTEHADNA 236 Query: 244 YLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAK 303 S +L + TDV + E+ + LF + FK ++ Sbjct: 237 RRSRELVRLVTDVPVPYEPERYRYRGADRTRCFTLFSELGFKSLVSEFAPTADSV----- 291 Query: 304 PAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDN 363 +Y + D L+A A L ++ T S Sbjct: 292 -----------------------DTDYRMVTDVAELEALAAALRESGRCGLHVLTVSGPP 328 Query: 364 ISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKY 423 +VGL+F+ A+Y+P+A D LD + L P+LED + K+G +LK Sbjct: 329 TRGGVVGLAFSTAARSASYVPLAQDGLDLTGSLDGGTVFGTLGPMLEDPQVRKIGHDLKR 388 Query: 424 DRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQ 483 D LA + I LRG+ DTM+ SY+L++ ++++A ++ +T + + GKG Sbjct: 389 DMLWLAAHEIRLRGLELDTMIASYLLDATRTTPTVETVALEHAGYQALTADTVRGKGAKA 448 Query: 484 LTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERN 543 F+++ + YA E AD+ LQ + L + + ++ +E PL+PVL+ IE Sbjct: 449 PDFDRLPPDGVLAYACERADLPLQAAEPLRARLDQER-LAELYRELEQPLIPVLADIETA 507 Query: 544 GVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT- 602 G+++ L S + L+EL+ + + +AGEEFN++S +QL ILFEK + KKT Sbjct: 508 GIQVATDALAVQSRRMDADLSELQSQIYTLAGEEFNINSPRQLSAILFEKLALPTRKKTG 567 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 A ST+ +VLEELA + LP++++E+R + KLK TY D LP ++ P TGRVHTS++QA Sbjct: 568 KTRAASTAADVLEELAQHHALPRLVIEWRAVQKLKGTYVDALPQLVRPDTGRVHTSFNQA 627 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKG 722 V ATGRLSS+DPNLQNIP+R GR IR+AF+A + +V++SADYSQIELR++AHLS D Sbjct: 628 VAATGRLSSSDPNLQNIPIRTPLGREIRRAFVARDGHVLISADYSQIELRVLAHLSADTA 687 Query: 723 LLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRK 782 L AF +DIH TA VFG E RR AK IN+ L+YG +AF L+R + + + Sbjct: 688 LTQAFIRNEDIHDKTALHVFGPDSGLDAHELRRRAKIINYALLYGKTAFTLSRDIGVTPQ 747 Query: 783 EAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERA 842 AQ ++D YFE YP V +++ +A+E G V T+ GRR +P++++ NG RAAAER Sbjct: 748 AAQAFIDAYFEGYPAVRGFLDGVIDEARESGEVRTMFGRRRLVPELRNRNGQIRAAAERV 807 Query: 843 AINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQ 902 +N P+QGTAADI+KRAMI + L P MI+ VHDEL+ E +D+ D+VA + Sbjct: 808 TVNMPIQGTAADILKRAMIDLAGALPPSAP---MILTVHDELLIEPPRDEADSVADLVRD 864 Query: 903 LMENCTRLDVPLLVEVGSGENWDQA 927 ME L VPL V+VG GENW A Sbjct: 865 RMERAADLTVPLRVDVGIGENWMAA 889 >UniRef50_Q73M72 DNA polymerase I n=1 Tax=Treponema denticola RepID=Q73M72_TREDE Length = 936 Score = 984 bits (2545), Expect = 0.0, Method: Composition-based stats. Identities = 362/948 (38%), Positives = 537/948 (56%), Gaps = 38/948 (4%) Query: 6 QNPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 ++ + ++D +YR+Y AF PLTNS GE A++G L S+ +Y P D Sbjct: 2 KDTIYVLDAYGLIYRSYFAFISRPLTNSKGENVSAIFGFFKSLHSIFTEYNPKLFVTALD 61 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 + TFR E+++ YK+ R PDDL AQI+ + ++K LP + +G EADDVI ++A Sbjct: 62 SLTPTFRHEMYKEYKATRDKTPDDLHAQIDKIEEILKTFKLPTVRCNGFEADDVIASIAA 121 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMT---NTILGPEEVVNKYGVPPELIIDFL 180 AEK GR ++ +GDKD+ QLV+ T++ E V ++GV P+ ++D L Sbjct: 122 LAEKEGRECVVISGDKDLMQLVSKTTTMLKPGKIKAWEGFDAENVKEEWGVYPDGMLDLL 181 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 +L+GDS+DN+PG+ GVG KTA LL+ LD +YA + G + K+E+ K Sbjct: 182 SLIGDSADNVPGIKGVGPKTAVKLLEEYKSLDGIYANTGNLKG-------ALKTKIEEGK 234 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 E AY S +L ++ DV +E Q E LF E + Sbjct: 235 ESAYFSKELIRLRFDVPVEKDLNAYSTSQMDYEAAARLFISEELPNIAKLYSEKIIAEKN 294 Query: 301 GAKPAAKPQETSVADEAPEVTAT---------------VISYDNYVTILDEETLKAWIAK 345 ++ + E E T+ + +Y + + E L + + Sbjct: 295 APSSKENLKQETGLFENSEQTSPEMLPQELGTGEEISLPQNKGDYKLVDEAEELFKIVDE 354 Query: 346 LEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELL 405 K + ++D ET S D ++A + G S A++ G A Y P+ + ++ + A + Sbjct: 355 ALKQGLASYDCETTSEDPLNAEVCGFSLALKEGEAYYFPLKAPCPELGEEAPKLIAFKDA 414 Query: 406 KPL---LEDEKALKVGQNLKYDRGILANYGIE--LRGIAFDTMLESYILNSVAGRHDMDS 460 K L D K + N K+D + + + FDTM+ +++L+ + MD Sbjct: 415 KKAVTKLFDSKMTLIMHNGKFDIQAALSSKLASGISANLFDTMIAAWLLDPARSSYGMDK 474 Query: 461 LAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHK 520 LAE L KTI F+++ +G+N F+ I L+EA YAAEDAD+T + + K P L+K+ Sbjct: 475 LAESILGVKTIRFKDLVKQGQN---FSDIPLKEACPYAAEDADITFRFYKKFLPLLKKN- 530 Query: 521 GPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNL 580 +F ++EMP+ +L+ +E G+ + + L +S+EL L + EK + + G EFN+ Sbjct: 531 NLEKLFFDLEMPITKLLTEMEIKGIFLKGEELTAYSKELGKELEDCEKDIYRLVGHEFNI 590 Query: 581 SSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTY 640 +S KQLQ +LFE++ + P KKT G ST VLE LA + P+P IL+YR LAKLKSTY Sbjct: 591 ASPKQLQEVLFEERKLTPGKKTKTG-YSTDTSVLENLASEDPVPAKILDYRALAKLKSTY 649 Query: 641 TDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYV 700 TD LP M + K GR+HTS+ Q TATGRLSS DPNLQNIP+R EGR+IR+AF A + V Sbjct: 650 TDTLPKMTD-KNGRIHTSFIQTGTATGRLSSRDPNLQNIPIRGNEGRKIREAFQAEKGRV 708 Query: 701 IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAI 760 ++SADYSQIEL I+AHLS+D+ L+ AF G D+H TA+ +F + ++ V+ + RR AK I Sbjct: 709 LISADYSQIELVILAHLSKDQNLVEAFNTGIDVHAKTASLIFAVDIKDVSQDMRRIAKTI 768 Query: 761 NFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDG 820 NFG++YGMSAF LA L IPRK A +++ YF Y GV +M +A+++GYVETL G Sbjct: 769 NFGVMYGMSAFRLASSLRIPRKRADEFIKAYFATYSGVSGFMANVCQEAEQRGYVETLMG 828 Query: 821 RRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQV 880 RR YLP I S N +A AER A+N P+QGTAADI+K AM+ VD L+ ++ +++QV Sbjct: 829 RRRYLPAINSKNKVEKAGAERIAVNTPIQGTAADIVKLAMLEVDKALKKQKLDASILLQV 888 Query: 881 HDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 HDEL+ E + + + V + + ME +L VPL V + SG +W + H Sbjct: 889 HDELIIEAAESEREKVMSLVKEKMEGVIKLSVPLRVSIESGMSWGEFH 936 >UniRef50_C6W4A8 DNA polymerase I n=44 Tax=Bacteria RepID=C6W4A8_DYAFD Length = 963 Score = 983 bits (2541), Expect = 0.0, Method: Composition-based stats. Identities = 396/972 (40%), Positives = 555/972 (57%), Gaps = 66/972 (6%) Query: 8 PLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 L L+D + +YRA+ AF P S G T A++G N L ++ + KPTH V FD Sbjct: 7 KLFLLDAMALIYRAHFAFIKAPRITSKGLNTSAVFGFTNTLLEVLQKEKPTHIGVAFDTA 66 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 TFR FE YK+ R P+D+ I + +++ M +P+L + G EADD+IGT+A+EA Sbjct: 67 APTFRHVQFEAYKAQREAQPEDITVAIPLVKRLLRGMCIPILELDGYEADDIIGTIAKEA 126 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINT---MTN-TILGPEEVVNKYGVPP-ELIIDFL 180 + G V + T DKD QLV I + +LG +++++++ + + +ID L Sbjct: 127 SREGFEVYMMTPDKDYGQLVEQYIHIYKPAFLGKGAEVLGVQQILDRWQIQRIDQVIDIL 186 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 LMGD+ DNIPG+PGVGEKTAQ L+Q ++ L +I G + K+ +N Sbjct: 187 GLMGDAVDNIPGIPGVGEKTAQKLIQEYDTIENLITHAGEIKG-------KLGEKIRENF 239 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGK----- 295 + A LS QLATI V + E L + P AE + LF + EFK + G+ Sbjct: 240 DKAVLSKQLATIDCKVPVPFDAEDLTICSPNAELIAELFDELEFKTLKTRILGGQPGGSA 299 Query: 296 ---------------------------WLQAKGAKPAAKPQETSVADEAPEVTATVI--- 325 + G +PAA + + + + + I Sbjct: 300 GALSPRPASAQAPARKNAKGQLDIFGNPTEEIGQQPAAVSGDLADGELTEDTSEIRIPTS 359 Query: 326 ------SYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGV 379 ++ Y T+ E + + L F FDTET SLD A LVGLSF+ G Sbjct: 360 KRTIDNTFHRYHTVDTPELMTSLAHYLSLQDAFCFDTETTSLDTTDAELVGLSFSYLAGE 419 Query: 380 AAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIA 439 A YIPV D A E + + + E+E K+GQN+KYD +L NYGIE+ G Sbjct: 420 AFYIPVPADRQQA------EEIVGYFRAVFENENIEKIGQNIKYDMLVLKNYGIEVHGKL 473 Query: 440 FDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAG-KGKNQLTFNQIALEEAGRYA 498 DTML Y+L RH MD LA +L ++ ++ + G KG Q +A+ E +YA Sbjct: 474 SDTMLAHYLLEPDK-RHGMDILAASYLNYEPVSITSLIGKKGGKQGNMRDVAIPEITQYA 532 Query: 499 AEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEE 558 EDAD+T QLH +L K +F +EMPL VL+ +E GV++D L S Sbjct: 533 GEDADITFQLHSIFSRELPK-VNAAKLFNEVEMPLTKVLASMENTGVRLDINALKEMSAV 591 Query: 559 LTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG-IKPLKKTPGGAPSTSEEVLEEL 617 L L + E + +E AG+ FN+SS KQL +LFEK I+ KKT G +T EE+L +L Sbjct: 592 LESDLRQTESEIYEAAGQSFNISSPKQLGEVLFEKMKLIEKPKKTKTGQYATGEEILSDL 651 Query: 618 ALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQ 677 ++ + + IL+YR L KLKSTY D LP M++ +TGR+HTSY+QAV ATGRLSST+PNLQ Sbjct: 652 EANHLIARKILDYRELQKLKSTYVDALPTMVSSRTGRIHTSYNQAVAATGRLSSTNPNLQ 711 Query: 678 NIPVRNEEGRRIRQAFIAPE-DYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRA 736 NIP+R GR IR+AF+ D+ I+SADYSQIELRIMA S D + AF +G+DIH Sbjct: 712 NIPIRTPRGREIRKAFVPDSADFQILSADYSQIELRIMAAFSGDASMTEAFNQGRDIHAT 771 Query: 737 TAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYP 796 TA++VF +PLE VTS+ RR +K +NFG+IYG+SAFGLA++L IPR EA + + YFE +P Sbjct: 772 TASKVFQVPLEEVTSDMRRKSKMVNFGIIYGISAFGLAQRLGIPRGEASEIIRAYFEEFP 831 Query: 797 GVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADII 856 V YM++ A+E+ YVET+ GRR YLPDI S N R AER AINAP+QG+AAD+I Sbjct: 832 AVKGYMDKVVNDAREREYVETILGRRRYLPDINSRNQTNRGYAERNAINAPIQGSAADMI 891 Query: 857 KRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLV 916 K AMI + ++ E+ + RMI+QVHDELVF+ H ++D + +++ +LM N + V + Sbjct: 892 KVAMINIHDFMAKEKLKSRMILQVHDELVFDAHYSEIDLLKERVDELMRNAIPMAVRMET 951 Query: 917 EVGSGENWDQAH 928 +G G NW +AH Sbjct: 952 GIGVGANWLEAH 963 >UniRef50_B0VJ17 DNA polymerase I n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VJ17_9BACT Length = 918 Score = 983 bits (2541), Expect = 0.0, Method: Composition-based stats. Identities = 371/931 (39%), Positives = 547/931 (58%), Gaps = 26/931 (2%) Query: 8 PLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 L L+DG++ LYRA+ AF PL NS G T A++GV+N ++ + + A+ FD K Sbjct: 4 KLYLIDGTALLYRAHFAFIKNPLINSKGIHTSAIFGVINSFLHILENTQAAYVAISFDRK 63 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 TFR L+E YK+ RPPMPD+L AQIEP+ + +GL + + G EADD++GTLA+ Sbjct: 64 APTFRHNLYEAYKAQRPPMPDELTAQIEPVKRFFELIGLKEIGLDGYEADDILGTLAKLY 123 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185 + ++ T DKD QLV +++ M + +L + V KYGV PE ID+LAL+GD Sbjct: 124 KDQ-FQIVFLTSDKDYCQLVDERSVMLDPMKDIVLDRDAVYAKYGVYPEQFIDYLALVGD 182 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 SDNIPGV +G KTA LL LD +YA +K+ + L +NKE AYL Sbjct: 183 PSDNIPGVSSIGPKTAAMLLSEYQTLDNIYANLDKLK-------PRLQEVLRENKENAYL 235 Query: 246 SYQLATIKTDVELE-LTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304 S QLA I TDV + E L + + L ++YE +E + Sbjct: 236 SKQLAKIDTDVPIPKPDLEHLTFWAKDLRKAIPLLEEYEINSIKRKIELKYPETNTTKQQ 295 Query: 305 AAKPQE--TSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 + E T +++ + +L++A + DTETDS + Sbjct: 296 TEYQDDIFKEKEKPQEETAETEEKMPFSAVLVNTLNFVTLLKELKEAKQISLDTETDSPE 355 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 + ANLVG+SF ++ A Y+P+ H + L L+ L + L +G NLK Sbjct: 356 PMRANLVGISFCMDEKKAYYLPLGHQLAVN---LPLPEVLRHLEDAL--KGKLLLGHNLK 410 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 +D +LA G+EL FDTML +YIL+ + +++ A L +K I ++ GKGKN Sbjct: 411 FDLIVLARNGLELDNPLFDTMLAAYILDPGTLNYSLETCALNELNYKMIPISDLIGKGKN 470 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 Q TF+ + E+A Y+AEDA +L+ + N+F+ IE+PL+ VL ++E Sbjct: 471 QSTFDLVEPEKACIYSAEDAWAVYKLYPVYRRKVD-FSVMANLFDTIELPLIKVLQQMEM 529 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 NGV ID VL S ++ L L L K + AG EFN++ST+QL +LFE++ + +KT Sbjct: 530 NGVAIDCSVLSEISHQINLELKTLTDKIYAFAGYEFNINSTQQLAKLLFEEKKLPYGRKT 589 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST VLEELA+DY + +I++YR L+KL+STY LP MINP+TGR+H+S++Q Sbjct: 590 KTG-YSTDNSVLEELAIDYEIAGIIIQYRQLSKLQSTYVSALPKMINPQTGRIHSSFNQT 648 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE-DYVIVSADYSQIELRIMAHLSRDK 721 VT+TGRLSS++PNLQNIPVR E GR IR+AF A + +++I+ ADYSQIELR++A +S D+ Sbjct: 649 VTSTGRLSSSNPNLQNIPVRTEIGREIRKAFCAKDAEHLILDADYSQIELRLLALMSEDE 708 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 L+ AF + DIH+ AA++F + +E VT +QRR+AK INFG++YGM L+R+L I Sbjct: 709 VLIEAFKQDLDIHKRMAAKIFNVDIEKVTPDQRRAAKTINFGILYGMGQRKLSRELGISL 768 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 EA+ +D Y+ ++P + ++ + +A++Q Y ETL GRRLYLP+I S N ++ AER Sbjct: 769 NEAKDIIDGYYAQFPSIRNFINQCVNKARQQHYAETLFGRRLYLPNIDSKNQGLKSEAER 828 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 A+N P+QGTAAD+IK AM+ + + + ++MI+QVHDEL+FEV ++ ++ + Sbjct: 829 IAVNMPIQGTAADLIKIAMLNIHKQIDKRE-DIKMILQVHDELLFEVQQEALEETKNIVK 887 Query: 902 QLMENCTRL----DVPLLVEVGSGENWDQAH 928 ME+ V L +VG G+NW +AH Sbjct: 888 TCMESALPPKYAEKVHLKTDVGVGKNWFEAH 918 >UniRef50_B8D217 DNA polymerase I n=1 Tax=Halothermothrix orenii H 168 RepID=B8D217_HALOH Length = 870 Score = 982 bits (2539), Expect = 0.0, Method: Composition-based stats. Identities = 357/925 (38%), Positives = 514/925 (55%), Gaps = 71/925 (7%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 + L L+DG S +RA++A P L+ S GE T A++G ML L+ + KP AV FD K Sbjct: 2 KKKLYLLDGQSLAHRAFYALPLLSTSRGEYTNAVFGFTRMLLKLLDEEKPDLIAVAFDKK 61 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 TFR + ++ YK+HR MP++L+ Q+ + ++K+ +P++ + G EADD+IGT+AR+ Sbjct: 62 APTFRHKEYKEYKAHRKKMPEELKPQLSLIKEVLKSFSIPIIEIEGFEADDIIGTMARKG 121 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLA 181 E+ G V+I TGD+D QLVT +++++ T +V +Y + P+ +ID Sbjct: 122 EEEGFEVVIVTGDRDALQLVTEDVSVMYTKRGISDIVRYDLNKVRERYELEPQQLIDMKG 181 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGDSSDNIPGVPG+GEKTA LL+ L+ + +K++G K L++ + Sbjct: 182 LMGDSSDNIPGVPGIGEKTAIKLLKEFSSLEEILDNIDKVSG------KKRKENLQKYAD 235 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 A LS +L IK DV L++ ++ + + + + LF++ EF + + Sbjct: 236 QARLSKRLGEIKVDVPLDVELDECHLGKFHKKNIRELFERLEFASLLNRFKEKTSISIDD 295 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDT-ETDS 360 LD + L+ K + Sbjct: 296 ISVKE---------------------------LDRKGLENICDKARNLGKLGLTLRLNNY 328 Query: 361 LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN 420 + A+ ++ G A+ +LKP+L D K N Sbjct: 329 TTPVRAHASQGIISLGEGNLYIFT------------DINEAISILKPILTDISVKKYILN 376 Query: 421 LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG 480 K L + IEL G+ FD +L Y+L + L ++ L Sbjct: 377 SKECTVFLKKHDIELEGLVFDPLLAYYLLKPSGKLPGLRDLLDQELSLSLPE-------- 428 Query: 481 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI 540 ++E Y D +L M P L+ + + +F +IE+PL+ VL+ + Sbjct: 429 ---------DIKEDNLYLVFM-DNIFKLAEGMVPKLEDME-LIELFNDIEIPLITVLAEL 477 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK 600 E NG+K+D + L + S + L LE K HE+AGE+FN++S KQL ILFEK G+ +K Sbjct: 478 EYNGIKVDAEYLESLSRKWEEELNGLESKIHELAGEKFNINSPKQLGGILFEKLGLPVIK 537 Query: 601 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 KT G ST +VLE+L +P+ +I EYR L KLKSTY D LP MINP TGR+HTS++ Sbjct: 538 KTKTG-YSTGAKVLEKLEDKHPIIPLISEYRQLMKLKSTYVDALPPMINPDTGRLHTSFN 596 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQIELRIMAHLSR 719 Q VTATGRLSST+PNLQNIPVR +EGR IR+AFI ED+V+++ADYSQIELR++AH+S Sbjct: 597 QMVTATGRLSSTEPNLQNIPVRTDEGREIRRAFITENEDWVLLAADYSQIELRVLAHISD 656 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 D+GL AF G+DIH TA+EVF + + VT RR AK INFG+ YGMS +GLAR L I Sbjct: 657 DEGLKAAFNTGQDIHTQTASEVFEVEPDEVTPNMRRHAKVINFGIAYGMSPYGLARDLGI 716 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 R+EA Y++ YFER+ GV +YMER +AK +GYV T+ RR Y+P+I S N RR+ A Sbjct: 717 SRQEASDYINKYFERFTGVKDYMERVVTEAKTKGYVTTIFNRRRYIPEINSRNYHRRSFA 776 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 ER AIN P+QGTAADI+K AMI V L+ R+++QVHDEL+ EV ++D+ +A+ Sbjct: 777 ERTAINTPIQGTAADIMKLAMIKVYNRLKENGSPARILLQVHDELILEVPREDLTEMARI 836 Query: 900 IHQLMENCTRLDVPLLVEVGSGENW 924 + ME + VPL+V + SG NW Sbjct: 837 VKSEMEKAVDMKVPLVVNLESGPNW 861 >UniRef50_C8W0H1 DNA polymerase I n=2 Tax=Clostridia RepID=C8W0H1_DESAS Length = 888 Score = 982 bits (2539), Expect = 0.0, Method: Composition-based stats. Identities = 357/931 (38%), Positives = 526/931 (56%), Gaps = 57/931 (6%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 + + N ++++DG+S ++RA+HA P L+ + G PT A+YG NML ++ +P V Sbjct: 6 LTEAKNNTILVIDGNSLIHRAFHAIPLLSTADGLPTNAVYGFTNMLLKILNDIQPKWVTV 65 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 FD TFR++ + YK+HR P++LR Q + ++ A+ + L G EADD+IGT Sbjct: 66 AFDKSKTTFRNQEYSEYKAHRKATPEELRPQFSLVKDVLNALSIKWLEAEGYEADDLIGT 125 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELI 176 + ++AE+ V+I +GDKD+ QLV+ I T E V K+GV P I Sbjct: 126 IVKKAEEEDADVVILSGDKDILQLVSDKTRAILTKKGITEIEEYNAENVYRKFGVHPNQI 185 Query: 177 IDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKL 236 D+ L GD SDNIPGVPG+G KTA LLQ ++ + A +KI + Sbjct: 186 TDYKGLTGDPSDNIPGVPGIGPKTATKLLQDFDSVENILANLDKI-------TSRARTLM 238 Query: 237 EQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKW 296 E N E A LS +LATI T+V +++T EQ +P EL + KK EFK+ D+ + Sbjct: 239 ENNSEQALLSKRLATIITNVPVQITLEQCIRTEPNEAELFNILKKLEFKKLLRDMLTAET 298 Query: 297 LQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDT 356 + K + S A Y+T+ ++E + + + +K+ A Sbjct: 299 GNSNQIKQKHLINKQSYA-------------VEYITLSEQEDFEDLLVQAQKSGKVALAL 345 Query: 357 ETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALK 416 + L+ ++ + G +P+ + AL+LL+ + D K K Sbjct: 346 QG----RREKGLISVALCLSEGQNYLLPL------NSSTETTSFALKLLQNICVDSKIKK 395 Query: 417 VGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEI 476 + K D +L YGIE+ FD ML Y+LN + A L Sbjct: 396 CCYDTKADLWLLHYYGIEINQPGFDVMLADYLLNPGKSARSLPETALSHL---------- 445 Query: 477 AGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPV 536 + + E + Y A+V +L + L + N++ +IE+PL+ V Sbjct: 446 ----------DIVLQEGSETYLPASAEVISRLVDILQSKLL-LQEQENLYYDIELPLLKV 494 Query: 537 LSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGI 596 L+ +ER GV +D + L SEEL +L L +E AGE FN++STKQL +ILFEK + Sbjct: 495 LASMERTGVSVDKEQLQLMSEELNKKLQVLTTDIYEHAGEIFNINSTKQLGSILFEKLKL 554 Query: 597 KPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVH 656 K KKT G ST VLEELA D+P+ ++LEYR LAKLKSTY D L +INP+TG++H Sbjct: 555 KAGKKTKTG-YSTDVTVLEELAGDHPVVSLLLEYRQLAKLKSTYVDGLTGLINPQTGKLH 613 Query: 657 TSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIELRIMA 715 T++HQAVTATGRLSS++PNLQN+P+R + GR+IR+ F+ D I SADYSQIELRI+A Sbjct: 614 TTFHQAVTATGRLSSSEPNLQNVPIRLDAGRKIRKFFVPCKPDNFIFSADYSQIELRILA 673 Query: 716 HLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLAR 775 H+++D L+ AFA+ +DIH TA+EVFG+ ++ VT E R AKA+NFG++YG+S FGLA+ Sbjct: 674 HIAQDNNLMDAFAKKQDIHTRTASEVFGVAMDEVTPEMRGRAKAVNFGIVYGISDFGLAK 733 Query: 776 QLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGAR 835 + + RKEA +Y++ YF RY GV Y++R +A+E+GYV T+ RR YLPD+ SSN Sbjct: 734 DIKVTRKEAGRYINNYFNRYSGVKAYIDRVIREAREKGYVTTILNRRRYLPDLFSSNRVV 793 Query: 836 RAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDA 895 R+ ER A+N P+QG+A+DIIK AM+ + ++ + MI+QVHDEL+F+V +V+ Sbjct: 794 RSFGERTAMNTPIQGSASDIIKLAMVLIYREMRKRKLSSTMILQVHDELIFDVVASEVEE 853 Query: 896 VAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 + + MEN L VPL+V++ G NW Sbjct: 854 MQNLVKYYMENAVELSVPLVVDMKIGPNWYD 884 >UniRef50_C1A3H5 DNA polymerase I n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A3H5_GEMAT Length = 984 Score = 980 bits (2535), Expect = 0.0, Method: Composition-based stats. Identities = 388/988 (39%), Positives = 555/988 (56%), Gaps = 73/988 (7%) Query: 1 MVQIPQN---PLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKP 55 M + + L L+DG + +YRA+ A PL+ S GE T +G+ + L+ L+ ++P Sbjct: 1 MADVTRPTAPRLFLIDGYALIYRAFFALLQRPLSTSRGENTSIAWGIASFLKRLLNTHQP 60 Query: 56 THAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEP----LHAMVKAMGLPLLAVSG 111 A V D+ TFRDEL+ YK+ R + DDL+A + + ++ A +P+L+ G Sbjct: 61 ELLAWVHDSGA-TFRDELYPDYKATREKLTDDLQADFDQGLQRVLQLLAAYDIPVLSAPG 119 Query: 112 VEADDVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN-------TILGPEE 164 EADDVIGT+A +AG V++ +GDKD QLV P + L+N + +G E Sbjct: 120 FEADDVIGTMAARGVEAGYNVVVVSGDKDFQQLVRPGVWLLNPGRGGPASVDESWVGVEN 179 Query: 165 VVNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGL 224 ++ GVPPE +ID+LA++GD+SDN+PGV G+GEK A L+ G L+ + A E I Sbjct: 180 GSDRLGVPPERVIDYLAIVGDTSDNVPGVKGIGEKGAIELITQYGPLENILANVENIT-- 237 Query: 225 SFRGAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEF 284 K L+Q + A LS QL TI DV + E+L V QP + L L+ + EF Sbjct: 238 ----KKRPREALQQYADSARLSKQLVTIHCDVPVPFESEKLTVGQPNTDALRALYLELEF 293 Query: 285 KRWTADVEAGKWLQAKGAKPAAKP------------QETSVADEAPEVTATVISYDNYVT 332 DV + A + + A E V++ YVT Sbjct: 294 TSLLKDVGGAVPVATSSGTGATSTAADVAPALPVPGRPAAPAVTLGESGVPVLADARYVT 353 Query: 333 ILDEETLKAWIAKLEKAPVFAFDTET-------DSLDNISANLVGLSFAIEPGVAAYIPV 385 + E L + ++ + P A DTET +D + + LVGLS A+ PG A Y+P Sbjct: 354 VDTVEALATLLTRVREVPYIAIDTETVIEPGAPFDVDALRSRLVGLSIAVAPGEAYYLPF 413 Query: 386 AHDYLDAPDQIS----------------------------RERALELLKPLLEDEKALKV 417 AH D ++ A L+ +LED K+ Sbjct: 414 AHRRDDGSGNLALLAGDTGTGIVGRRINAGAPEPVNLPPFDSDACAPLRAMLEDPSVTKI 473 Query: 418 GQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIA 477 QN KYD +L + G+ + G+ FDTML SY+L+ H +D LA L H ++ + Sbjct: 474 AQNAKYDLLVLRSSGVRVAGVGFDTMLASYVLDPGRRSHGLDLLALEQLGHTMTAYDTLV 533 Query: 478 GKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVL 537 GKGK QL F+ ++ A Y+ ED D+T++L K+ P L +H L++F+ IE+PLV VL Sbjct: 534 GKGKTQLPFDVAPVDTARDYSCEDVDITMRLRAKLEPMLAEHA-LLSLFQEIEVPLVSVL 592 Query: 538 SRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIK 597 + +E G+ ID + +E+ + AGEEFN++S +L+ ILFEK G+ Sbjct: 593 AEMEWEGIAIDLDWFASLKARFAAERGRVEQAIYAEAGEEFNINSNPKLRAILFEKLGLP 652 Query: 598 PLKKTPGGAPSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVH 656 KKT G PST VL+ELA + + LP +++EYR + KL+ TY D LP +++P+ R+H Sbjct: 653 VKKKTATG-PSTDASVLQELAEEGHVLPTLLMEYREIFKLEGTYIDALPRLVHPRDRRLH 711 Query: 657 TSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAH 716 TSY Q V+ATGRLSS DPNLQNIP+R E GR IR+ F+ E + ++SADYSQIELR++AH Sbjct: 712 TSYSQTVSATGRLSSHDPNLQNIPIRRELGRDIRRGFVPREGWRLLSADYSQIELRVLAH 771 Query: 717 LSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQ 776 LS D ++AF G DIHR TAA +FG+PLE VTSE R AK INF IYG A L+RQ Sbjct: 772 LSADPAFVSAFKAGGDIHRQTAAIIFGVPLEDVTSEMRARAKTINFATIYGQGAHALSRQ 831 Query: 777 LNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARR 836 L I EA+ +++ YFER+ GV ++++ A+ +GYVETL RR Y+P++K N R Sbjct: 832 LRITNAEAKAFIETYFERFAGVRGFLDQCVVDARARGYVETLFKRRRYIPELKERNFNIR 891 Query: 837 AAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAV 896 A ER A NAP+QG+AAD+IK AMI V + AE RM++QVHDELVFE+ ++ D + Sbjct: 892 AFGERVAQNAPIQGSAADLIKIAMINVRNAIDAEGLASRMLLQVHDELVFELPVEEADTL 951 Query: 897 AKQIHQLMENCTRLDVPLLVEVGSGENW 924 + + + ME L+VPLLVE+G G +W Sbjct: 952 SALVKREMEGAAVLNVPLLVEMGLGTDW 979 >UniRef50_D0RQG2 DNA polymerase I n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RQG2_9RICK Length = 925 Score = 979 bits (2530), Expect = 0.0, Method: Composition-based stats. Identities = 376/941 (39%), Positives = 568/941 (60%), Gaps = 33/941 (3%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPPLTN-SAGEPTGAMYGVLNMLRSLIMQYK-------P 55 + L L+DGS Y++RAY+A PPLT S G P GA+ G NML S + + K P Sbjct: 2 SKEKHLFLIDGSGYIFRAYYALPPLTRKSDGLPVGAVSGFCNMLYSFLEKAKAGNTMDTP 61 Query: 56 THAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115 TH AV+FD+ K FR+++++ YK +R P+DL Q + + VKA LP + + EAD Sbjct: 62 THLAVIFDSARKNFRNDIYKDYKGNRSDAPEDLIPQFDYIRKAVKAFNLPSIEMLNYEAD 121 Query: 116 DVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPEL 175 D+I T +A+K + I + DKD+ QLV +++TM + +G EEV K+GVPPE Sbjct: 122 DLIATYKEKAKKKKIKITIVSSDKDLMQLVDKETFMLDTMKDRHIGIEEVKEKFGVPPEK 181 Query: 176 IIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAK 235 +ID +L GDS DNIPGVPG+G KTA L+ G LD L + + I Sbjct: 182 VIDVQSLAGDSVDNIPGVPGIGVKTAAELINQFGSLDELLKKADTIKQ------PKRRQT 235 Query: 236 LEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGK 295 L NK+ A +S +L T+K DV ++ E ++ E++ + EF + +E Sbjct: 236 LLDNKKNALISRELVTLKCDVPIKEEIEDFILKPLDKEKIFNFLDEMEFSKIKKSIEQTY 295 Query: 296 WLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFD 355 + + A + I + + L+ + + + FA D Sbjct: 296 G---------KSSDTLTKKETATPQKTNNKKESGFHIIYEAQELEDLLKQADNQGYFAID 346 Query: 356 TETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPD---QISRERALELLKPLLEDE 412 TET+SL++ A+LVG+S AI A Y+PV H P+ QI + +++LKP LEDE Sbjct: 347 TETNSLNSQKADLVGISLAINENEAYYVPVGHKNKQDPNLKKQIKIKELVKVLKPYLEDE 406 Query: 413 KALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTIT 472 KVGQN+KYD I YGIEL+ DTML SY L++ RH++D LA+ L H I Sbjct: 407 TVKKVGQNIKYDLKIFLKYGIELKS-FEDTMLLSYSLDAGVNRHNLDLLAKTHLDHDNIK 465 Query: 473 FEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMP 532 F+++ G GK+++TF+++ ++ A RYA EDADVTL+L+ + K K ++E +E+P Sbjct: 466 FKDVVGTGKSEVTFDEVLIDNAYRYACEDADVTLKLYNLFKDRIVKEK-CFQIYETLEIP 524 Query: 533 LVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFE 592 LV VL+R+E NG+KID +L S + L LEKK ++++GEEFN++STKQL IL+E Sbjct: 525 LVDVLARMENNGIKIDQVILKKLSNSFSADLKTLEKKIYKLSGEEFNIASTKQLGDILYE 584 Query: 593 KQGIKPLKKTPGGAPSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINPK 651 K I KKT G +T+ VLE+LA PK++LE+R +KLK+TYTD LP I+ Sbjct: 585 KLKISGTKKTKKGNFATNVNVLEDLASKGNEFPKLVLEWRQKSKLKNTYTDSLPEYIDKN 644 Query: 652 TGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIEL 711 T R+HTS+ A T+TGRL+S DPNLQNIP++++EG+ IR AF++ + I+SADYSQIE+ Sbjct: 645 TKRIHTSFLLAATSTGRLASADPNLQNIPIKSKEGKLIRSAFVSEKGSSIISADYSQIEM 704 Query: 712 RIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAF 771 R++AH++ K L AF +DIH TA+++F ++ + + RR AKAINFG+IYG+S++ Sbjct: 705 RVLAHVADVKELKKAFKNNEDIHNITASQIFECDIKKINEDMRRKAKAINFGIIYGISSY 764 Query: 772 GLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSS 831 GLA+Q+++ EA++++ YF+++P + +YM+ T ++ G+V+T+ R+ + P+I Sbjct: 765 GLAKQISVSNPEAEQFLFSYFKKFPEIRDYMQETLEFCRKNGFVQTMFNRKCHFPNINDK 824 Query: 832 NGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKD 891 N ++ ERAAINAP+QG AADII+ AMI +D + +++ + R+++Q+HDEL+ E Sbjct: 825 NHTLKSFQERAAINAPIQGAAADIIRFAMINIDKKILSKKIKSRLLVQIHDELLLETKDM 884 Query: 892 DVDAVAKQIHQLMENCT----RLDVPLLVEVGSGENWDQAH 928 D+ ++I MEN VPL+V+ S +NW+ AH Sbjct: 885 DLKKEIQKIKNEMENAIDGDYNFSVPLIVDANSAKNWNDAH 925 >UniRef50_C3J9S9 DNA polymerase type I n=2 Tax=Bacteria RepID=C3J9S9_9PORP Length = 937 Score = 978 bits (2529), Expect = 0.0, Method: Composition-based stats. Identities = 379/952 (39%), Positives = 547/952 (57%), Gaps = 42/952 (4%) Query: 2 VQIPQNPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAA 59 L L+D S +YRAY AF P +S G T A+ G N L +I + KP + A Sbjct: 3 PTFTGKRLFLLDASMLIYRAYFAFIHTPRFDSKGNNTSALLGFANSLIEIIKKEKPDYLA 62 Query: 60 VVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIG 119 V+FD +G +FR + YK+ R P+ + + +++A+ +P + V EADDV+G Sbjct: 63 VIFDPEGGSFRHREYTAYKAQRDATPEGILWAFPQVKRLLEALRIPAIEVPDYEADDVVG 122 Query: 120 TLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN--TILGPEEVVNKYG-VPPELI 176 TL++ AEK G V + T DKD QLVT + + T + G EV K+G V + Sbjct: 123 TLSQRAEKEGFEVYMVTADKDYGQLVTEHALMYRPGTKGAEVWGEAEVCEKFGLVHCSQM 182 Query: 177 IDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKL 236 +D+LAL+GD+SDNIPG G+G K A LL G +D +Y ++++ ++ KL Sbjct: 183 VDYLALVGDASDNIPGCKGIGPKKASELLTQFGSIDAIYEHLDELS-------PSLKKKL 235 Query: 237 EQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKW 296 E+ +E LS LA I T+V +E+ E +P +L L ++E + + Sbjct: 236 EEGRENTLLSRYLAKICTEVPMEVEWETFRHLEPNVPQLRALLAEFEMHTLAKRLLPNEG 295 Query: 297 L-----------------QAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETL 339 + K A +T + Y + +E Sbjct: 296 EAADWGGGLFSSSSTSQDEGKEPSEANSLFSPERTASLQGLTTLKDTAHTYHVVRTKEEQ 355 Query: 340 KAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRE 399 K A+L ++ FAFDTETD L+ ++A++V SFA E G A Y+P+ D+ +A Sbjct: 356 KQLWARLAESKQFAFDTETDGLNPLTASIVVASFAPEEGEAYYLPLPQDFDEAC------ 409 Query: 400 RALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMD 459 L+ L L+ + + LK+ QN K+D+ +LA YG+ FDT++ Y++ RH++D Sbjct: 410 AILQPLDALMRNSEILKMAQNAKFDQKLLARYGVSSATPLFDTLVAHYLIAPDQ-RHNLD 468 Query: 460 SLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKH 519 +LAE++L ++TI + +++ K KN +A E YAAEDADV +L+ + L++ Sbjct: 469 TLAEQYLGYRTIAYSDLSEK-KNFDLRRDVAEELLVDYAAEDADVVRRLYPLLREKLEQE 527 Query: 520 KGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFN 579 + +F +EMPLV VL R+ER GV++D + LH SE+LT L E E AG FN Sbjct: 528 Q-QEKLFWEVEMPLVGVLERMEREGVQLDVQRLHEVSEKLTNDLRETEDAIFHWAGHSFN 586 Query: 580 LSSTKQLQTILFEKQG-IKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKS 638 +SS KQ+ +LFE+ G KKT STSEEVL + +P+ + IL+YRGL KL Sbjct: 587 VSSPKQVGVVLFEELGLHAKGKKTKTNTYSTSEEVLSKCVDQHPIVQKILDYRGLKKLIG 646 Query: 639 TYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE- 697 TYT+ LP ++ P GR+ TSY+QAVT TGRLSS+DPNLQNIP+R+ G+ IR AF+ Sbjct: 647 TYTEALPELVYP-DGRLRTSYNQAVTVTGRLSSSDPNLQNIPIRSAMGQEIRSAFVPRSS 705 Query: 698 DYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSA 757 ++ +SADYSQIELR+MAH S+D+ L+ AF EG+D+HR+TAA ++ + E VT QR A Sbjct: 706 EFTFLSADYSQIELRLMAHFSQDEHLIKAFVEGEDVHRSTAARIYNVAPEEVTPLQRSHA 765 Query: 758 KAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVET 817 K NFG+IYG+SA+GL+++LNI EA + YFE YP V YM+ +A++ GY ET Sbjct: 766 KTANFGIIYGISAYGLSQRLNIDPSEASSLISSYFENYPAVRAYMDECVQKARKLGYTET 825 Query: 818 LDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMI 877 L GRR YLPDI S + R AER A+NAP+QGTAAD+IK AMI +DA ++ + RMI Sbjct: 826 LLGRRRYLPDINSRSATVRQFAERNAVNAPIQGTAADLIKVAMIRIDAKMRERNMKSRMI 885 Query: 878 MQVHDELVFEVHKDDVDAVAKQIHQLMENCT-RLDVPLLVEVGSGENWDQAH 928 MQVHDEL F+ + +VD + +HQ M L VPL VE+G G +W +AH Sbjct: 886 MQVHDELNFDAYLPEVDELRALVHQEMCQAIPNLRVPLEVEIGVGSSWLEAH 937 >UniRef50_Q2JPZ4 DNA polymerase I n=3 Tax=Cyanobacteria RepID=Q2JPZ4_SYNJB Length = 931 Score = 978 bits (2528), Expect = 0.0, Method: Composition-based stats. Identities = 374/952 (39%), Positives = 528/952 (55%), Gaps = 50/952 (5%) Query: 3 QIPQNPLILVDGSSYLYRAYHAFPP-----LTNSAGEPTGAMYGVLNMLRSLIMQYKPTH 57 L+LVDG S YR+++AF L S G PT +G L L ++ +Y PTH Sbjct: 2 AWQTPTLLLVDGHSLAYRSFYAFAYSREGGLRTSTGIPTSVSFGFLKSLLEVLDKYTPTH 61 Query: 58 AAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDV 117 AV FD + TFR E E YKS RP P + +E L ++ A+ +P+L V G EADD+ Sbjct: 62 VAVAFDTRQPTFRHEADETYKSGRPETPPEFIEDVENLKQVLTALRIPILVVPGFEADDI 121 Query: 118 IGTLAREAEKAGRPVLISTGDKDMAQLVT--PNITLINTMTNTIL---GPEEVVNKYGVP 172 +GTL+R A + V I +GD+D+ QL+ + +++ + + GPE+V K G+ Sbjct: 122 LGTLSRLAPQ-DYRVQILSGDQDLFQLIDTDGRVRVLHLNSKDRISEFGPEQVKEKLGIW 180 Query: 173 PELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTM 232 P ++D+ AL GD SDNIPGV G+G K A LL+ G LD ++ ++I G + Sbjct: 181 PWQVVDYKALCGDPSDNIPGVKGIGPKRAVELLERYGSLDEIFDHLDEIQG-------KV 233 Query: 233 AAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVE 292 L++ A+ S +A IK DV L E +++ ELL L +K EF + A V Sbjct: 234 QQYLKEGIPAAHHSQFMARIKCDVPLSPDWESMKLTGFDQAELLPLLEKLEFHSFIAQVR 293 Query: 293 AGK-------------WLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETL 339 + PA P E D A + S I E L Sbjct: 294 KIQTALGGIPTEAEVVGAFNPTGDPANAPDEALWFDFALDPVP---SLPAVRIIDTPEQL 350 Query: 340 KAWIAKLEKAP-VFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISR 398 + +L P + A+DTET SLD A LVG+ G AY+P+ H + Sbjct: 351 ELLRQELLACPGIVAWDTETTSLDPRDAQLVGIGCCWSEGDIAYLPIGHRQ---GSNLDW 407 Query: 399 ERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDM 458 E + L+PL ED K QN KYD I +GI L+GI FD ML SY+L+ A H++ Sbjct: 408 ELVKQSLQPLWEDPNRPKSLQNCKYDLSIFRAHGIRLQGIQFDPMLASYVLDPEAS-HNL 466 Query: 459 DSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQK 518 LA L T +++++ GK + + I + + Y DA +L + LQK Sbjct: 467 ADLAATHLNLPTTSYKKLLGK---EQSIADIPISKVAEYCGTDAYCAYRLVPILTEKLQK 523 Query: 519 -HKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEE 577 ++F +E+PL VL +E G+++D + L S+EL L LE+KA+ AGE Sbjct: 524 TDPRLWDLFIQVELPLAQVLEEMEWIGIRVDTEFLRQFSQELEQELQSLEQKAYAQAGET 583 Query: 578 FNLSSTKQLQTILFEKQ--GIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAK 635 FNL+S KQL ++LFEK I+ +KT G ST VLE+L D+PL + I++YR LAK Sbjct: 584 FNLNSPKQLGSLLFEKLKLDIRKTRKTATG-YSTDASVLEKLEGDHPLIETIVQYRTLAK 642 Query: 636 LKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA 695 LKSTY D LP ++ TGRVHT ++Q VTATGRLSS++PNLQNIP+R E RRIRQAFI Sbjct: 643 LKSTYVDALPALVRSDTGRVHTDFNQTVTATGRLSSSNPNLQNIPIRTEFSRRIRQAFIP 702 Query: 696 PEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRR 755 E +++ +ADYSQIELRI+AHLS++ LL F G+D+H TA + +TSE+RR Sbjct: 703 QEGWLLTAADYSQIELRILAHLSQEPALLEGFRSGEDVHTLTARLLLEKQ--EITSEERR 760 Query: 756 SAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYV 815 AK IN+G+IYGM A AR + EA++++ + ERY G+ Y+ T A ++ GYV Sbjct: 761 LAKTINYGVIYGMGAQRFARTAGVSLSEAKQFLQRFNERYAGIFAYLRSTEAFVEKHGYV 820 Query: 816 ETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVR 875 ET+ GRR Y P++ G R+ A RAA+NAP+QG+A+DIIK AM+ + LQ R R Sbjct: 821 ETILGRRRYFPNLSRLTGHRKQAELRAAVNAPIQGSASDIIKVAMVRLRQKLQ--NFRSR 878 Query: 876 MIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 +++QVHDELVFEV + A+ I + ME L +PL+V++ G NW +A Sbjct: 879 LLLQVHDELVFEVDPSEWQALKPLIQREMEGAVPLSIPLVVDIQIGHNWKEA 930 >UniRef50_Q6MEQ2 Probable DNA polymerase I n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MEQ2_PARUW Length = 891 Score = 976 bits (2523), Expect = 0.0, Method: Composition-based stats. Identities = 376/924 (40%), Positives = 536/924 (58%), Gaps = 37/924 (4%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 + L ++D S Y+YR+Y A +TN+ GE T A++G + + LI + PTH VFD Sbjct: 2 DKLYILDASGYIYRSYFAIRQMTNARGESTNALFGFIRSVLKLIKDFNPTHLVAVFDGPN 61 Query: 67 KT-FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 + R EL+ YK+HR MP DL QI + MG+P L V GVEADD +G++A+ A Sbjct: 62 NSQKRTELYPAYKAHRKEMPKDLLYQILWSQRFCQLMGIPELMVPGVEADDTMGSIAKWA 121 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNT-ILGPEEVVNKYGVPPELIIDFLALMG 184 I T DKDM QLV+ I ++NT + I+ V ++GV P +ID+LA++G Sbjct: 122 ATLNTTAYICTSDKDMCQLVSNQILILNTFKDNLIIDANGVKEQFGVMPAQMIDYLAIIG 181 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 D+SDNIPG+ G G KTA LL+ G LD + P +++G K L KE Sbjct: 182 DASDNIPGLTGFGPKTAADLLEKFGSLDYILEHPLEVSG------KKKQDTLISEKEKVL 235 Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304 LS +L + T V + ++ PA + L + + F ++EA K + Sbjct: 236 LSKKLVIVDTTVSFPNQEDFFKLTSPAYQSLKEFYAEMNFSSLIRELEAVKSGISFSDLE 295 Query: 305 AAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNI 364 + + Y + DEETL I+ L + DTET L + Sbjct: 296 S-------------------QNEVVYQLVNDEETLVNLISYLSQQKEICLDTETTDLRPL 336 Query: 365 SANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYD 424 A LVG+ +EP A YIP+ Q++ + L LKPLLE+ G N KYD Sbjct: 337 EAQLVGIGLGVEPKKAWYIPL-------NGQLNGDFVLSQLKPLLENPSIGFYGHNFKYD 389 Query: 425 RGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQL 484 +L N+ I + I+FDT+L SY+LNS +H +D LA I +E+ GKGKNQL Sbjct: 390 YHVLRNHNISVANISFDTILASYLLNSHKRQHSLDHLALELFDKVKIAIQELIGKGKNQL 449 Query: 485 TFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNG 544 +AL++ Y ED D T++L + L + + ++ ++E+PL+ VL+++ERNG Sbjct: 450 NMKNVALDKICHYCCEDVDYTIRLKNILLSQL-EERKLTSLLFDLELPLLSVLAQMERNG 508 Query: 545 VKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPG 604 + ID L + S+ + + LE+ + +AGE FNL+S KQL ILF K GIKP KK Sbjct: 509 IFIDTAYLKHLSQFIGQEIHCLEQNIYALAGEIFNLNSPKQLSQILFHKLGIKPPKKIAT 568 Query: 605 GAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVT 664 G ST+ EVLE L YP+ + +LEYR L KL+STY + LPL +N KTGR+H +++Q++ Sbjct: 569 GH-STNAEVLEILKHVYPIAEKLLEYRTLEKLRSTYVNSLPLQVNAKTGRIHCNFNQSMA 627 Query: 665 ATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIELRIMAHLSRDKGL 723 ATGRLS DPNLQNIPVR E GR+IR+AF ED+ +SADYSQIELR++AHLS D L Sbjct: 628 ATGRLSCQDPNLQNIPVRTEVGRQIREAFRPEKEDWSYLSADYSQIELRLLAHLSEDPVL 687 Query: 724 LTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKE 783 + AF +DIH+ TA+ +F +PL+ V+SEQR AKA+NFGLIYG AFGLA +L I K Sbjct: 688 IKAFLSNEDIHKYTASLIFDVPLQQVSSEQRYQAKAVNFGLIYGQQAFGLAHELGIDTKT 747 Query: 784 AQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAA 843 A ++ YFERY V E++E + A+E G T+ GR LP+I+S N RA A+R A Sbjct: 748 AAAFIQRYFERYGKVKEFLEACKQSARETGKAVTMYGRERLLPEIRSQNAMIRATADRFA 807 Query: 844 INAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQL 903 +N P+QGT AD+IK AM+ ++ L E+ + MI+Q+HDEL+FEV ++++++ + Sbjct: 808 VNTPIQGTQADLIKMAMLKINKLLIQEKKKGFMILQIHDELIFEVPNQELESISHLVKNT 867 Query: 904 MENCTRLDVPLLVEVGSGENWDQA 927 MEN L VPL+V + G+NW + Sbjct: 868 MENIINLKVPLIVNIHIGKNWKEC 891 >UniRef50_Q2RHE8 DNA polymerase I n=4 Tax=Clostridia RepID=Q2RHE8_MOOTA Length = 885 Score = 974 bits (2519), Expect = 0.0, Method: Composition-based stats. Identities = 368/930 (39%), Positives = 511/930 (54%), Gaps = 58/930 (6%) Query: 4 IPQN--PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 +P L+LVDG+S ++RA+HA PPL G T A+YG ML+ +KP + V Sbjct: 1 MPTKTARLLLVDGNSVIHRAFHALPPLQTREGIRTNAVYGFATMLQKAREMFKPDYIIVA 60 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 FD TFR+EL++ YK RP +LR Q + ++ A L V G EADD+IGTL Sbjct: 61 FDHSKVTFRNELYDEYKGTRPETDPELRPQFALVKRLLAAWNLASCEVEGYEADDLIGTL 120 Query: 122 AREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELII 177 +R+ G VLI TGD+D QLV + ++ ++ E + YG+ PE +I Sbjct: 121 SRQGAATGLEVLILTGDRDALQLVGERVKVLLMRRGLSQVEVIDREAIKKNYGLEPEQLI 180 Query: 178 DFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLE 237 D ALMGD+SDNIPGVPGVGEKTA L++ G L+ + A +I G + +A L Sbjct: 181 DVKALMGDASDNIPGVPGVGEKTAVQLVRQYGDLEGVLAHSGEIKG------RRVAENLV 234 Query: 238 QNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWL 297 + A L+ +LATI + L Q P E +L L+K+ EF DV Sbjct: 235 TFADQARLARRLATIDCQAPVTLDLAGCCNQSPDYEAVLALYKELEFHSLVKDVLRAME- 293 Query: 298 QAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTE 357 + +S + +T+ E L +A+L A + Sbjct: 294 ------------QEGKKASQETTAVRGLSLPDPLTLDSLEELAELVARLVGKTDVALELI 341 Query: 358 TDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKV 417 ++ + A V + A E GVA + ++ L + P+ Sbjct: 342 LNNPSYLEAAAVAVGLAWEDGVAV---LGTAGIEPAALAGTLEPLLRVNPIF-------- 390 Query: 418 GQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIA 477 + K +N G + DTM+ Y+LN A RHD+ L L Sbjct: 391 -HDAKRALVWFSNAGAGVADPGGDTMVAGYLLNPSASRHDLPELCLEHLN---------- 439 Query: 478 GKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVL 537 + + AA A V LH ++ L + G N++ +E+PL VL Sbjct: 440 --------LALVEGDSPQLAAARRAAVIRLLHRELASKL-QVAGMENLYRRVELPLTRVL 490 Query: 538 SRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIK 597 +E GV ++ + L EL LA L + +E+AGEEFNL+S KQL ILFEK G+ Sbjct: 491 GAMESYGVAVNMETLDLMGIELEGGLAALTEAIYELAGEEFNLNSPKQLAVILFEKLGLP 550 Query: 598 PLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHT 657 P+K+T G ST VLEELA +P+ ++EYR LAKLKSTY D L ++NP+TG +HT Sbjct: 551 PVKRTKTG-FSTDAAVLEELACRHPIAAKLVEYRQLAKLKSTYVDGLKPLVNPRTGSLHT 609 Query: 658 SYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQIELRIMAH 716 S++Q VTATGRLSS++PNLQNIPVR E GRR+R+AF+ ++++ADYSQIELRI+AH Sbjct: 610 SFNQTVTATGRLSSSEPNLQNIPVRLELGRRLRKAFVPHGPGRLLLAADYSQIELRILAH 669 Query: 717 LSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQ 776 +S D+ ++ AF G+DIH TAAEVFG+PL VT RRSAKA+NFG++YG+S +GL+R Sbjct: 670 ISGDEAMIAAFRRGEDIHARTAAEVFGVPLGEVTPAMRRSAKAVNFGIVYGISDYGLSRD 729 Query: 777 LNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARR 836 L I R EA Y++ YF RY GV Y+E A+A+++GYV TL GRR YLPD+ SSN R Sbjct: 730 LGISRSEAHDYIERYFRRYRGVKAYLEEIVARARQEGYVTTLLGRRRYLPDLFSSNRNVR 789 Query: 837 AAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAV 896 + ER A+N P+QGTAADIIK AM+ + L+A+ P RMI+QVHDEL+F+V DD+ AV Sbjct: 790 SFGERTAMNTPIQGTAADIIKMAMVKIFRLLEAQYPAARMILQVHDELIFDVPDDDLPAV 849 Query: 897 AKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 A + ME+ L VPL V++ +G NW Sbjct: 850 AGLVKDTMEHTLELQVPLQVDLKAGPNWYD 879 >UniRef50_O08307 DNA polymerase I n=4 Tax=Chloroflexi (class) RepID=DPO1_CHLAA Length = 942 Score = 972 bits (2513), Expect = 0.0, Method: Composition-based stats. Identities = 368/950 (38%), Positives = 544/950 (57%), Gaps = 42/950 (4%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPP--LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 + L+LVDG + YRA+ A L +S GEPT A++G +L + + +Y+P +AAV Sbjct: 1 MAYPLLVLVDGHALAYRAFFALRESGLRSSRGEPTYAVFGFAQILLTALAEYRPDYAAVA 60 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 FD TFRD+L+ YK+ R P++ Q E + +V+A+ +P+ G EADDVIGTL Sbjct: 61 FDVGR-TFRDDLYAEYKAGRAETPEEFYPQFERIKQLVQALNIPIYTAEGYEADDVIGTL 119 Query: 122 AREAEKAGRPVLISTGDKDMAQLVTPNITLI--NTMTNT----ILGPEEVVNKY-GVPPE 174 AR+A + G +I TGD D+ QLV ++ + N + E+V +Y G+ P+ Sbjct: 120 ARQATERGVDTIILTGDSDVLQLVNDHVRVALANPYGGKTSVTLYDLEQVRKRYDGLEPD 179 Query: 175 LIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAA 234 + D L GD+SDNIPGV G+GEK A ALL+ LD L + + K Sbjct: 180 QLADLRGLKGDTSDNIPGVRGIGEKGAIALLKQFRSLDALLEQIDA-------APKRYQT 232 Query: 235 KLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVE-- 292 L + E A S QLATI TDV ++L E + ++ LF++ EF + ++ Sbjct: 233 LLREQAEAARFSRQLATIVTDVPVQLDLEAARIGVYDRSAVMALFQELEFGVSSNLIKKL 292 Query: 293 ---------AGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWI 343 A A P + S+ E + D L + Sbjct: 293 PSVVQAPTLAELPADLPAAPLTTAPTQLSLFAGESEPAQPTAEPPPVTIVRDATALADLV 352 Query: 344 AKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALE 403 ++L AP FAFDTE SL ++++LVG+S AI P YIPV H + Q+ + Sbjct: 353 SRLRNAPAFAFDTECTSLQPVASDLVGISIAIAPDTVCYIPVGH---QSETQVPCGEVVT 409 Query: 404 LLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLA- 462 L P + + K N K+D +LA GI++ G+AFDTM+ + +L R + LA Sbjct: 410 ALAPFFANPQQPKFAHNAKFDMEVLAGAGIKVSGLAFDTMIAAAML---GKRQGLKDLAF 466 Query: 463 -ERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKG 521 E L T E++ G+G Q++F ++ +E+A YAA DA TL+L ++ L+ Sbjct: 467 YELKLPEPPTTIEDLIGRGNKQISFAEVPVEQAAPYAAADALYTLRLTERLQRQLEAEPA 526 Query: 522 PLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLS 581 +++ +E+PL+ VL+ +E G+++D + L R+A+L ++ ++ AG FN++ Sbjct: 527 LHDLYYRVELPLIEVLTDMELTGIRLDQEYLRELGRHFAQRIADLVERIYQQAGGPFNIN 586 Query: 582 STKQLQTILFEKQGIKP----LKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLK 637 S +QL +LF + GI P L K G S + EVLEEL+ YP+ IL YR L KLK Sbjct: 587 SGQQLNDVLFGRLGIDPRAHGLSKLKSGGYSITAEVLEELSQLYPIAADILTYRQLTKLK 646 Query: 638 STYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE 697 STY D LP ++NP+TGR+HTSY+Q ATGRLSS +PNLQNIPVR EEGR IR+AF+A Sbjct: 647 STYIDALPDLVNPRTGRIHTSYNQLGAATGRLSSNNPNLQNIPVRTEEGREIRRAFVAEP 706 Query: 698 DYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSA 757 + V+ADYSQIELR++AH+S D+ L+ AF +G DIH ATA+ +FG+ V QRR A Sbjct: 707 GWRFVAADYSQIELRVLAHMSGDENLIAAFQQGLDIHAATASRLFGVEPTAVDKNQRRVA 766 Query: 758 KAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVET 817 K + FG+IYG+SAFGLA++L I R A++ +D F ++PG+ Y+++T ++ GYV+T Sbjct: 767 KTVVFGVIYGISAFGLAQRLGIERDLARQLIDNLFAQFPGIRRYIDQTLEFGRQHGYVQT 826 Query: 818 LDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMI 877 L GRR + D+++S R AA AINAP+QGTAAD++K AM+ V L+ + R R++ Sbjct: 827 LFGRRRVMEDLRASGARRAAAER-EAINAPIQGTAADLMKMAMVNVHRALREQGLRTRLL 885 Query: 878 MQVHDELVFEVHKDDVDAVAKQIHQLMENCTR-LDVPLLVEVGSGENWDQ 926 +QVHDEL+ E +D+V+ A+ + +M + R L VPL V + G NWD+ Sbjct: 886 LQVHDELIAEAPEDEVEPAARLLRDVMSSVYRDLVVPLSVNLEVGPNWDE 935 >UniRef50_B2UNN5 DNA polymerase I n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UNN5_AKKM8 Length = 945 Score = 971 bits (2510), Expect = 0.0, Method: Composition-based stats. Identities = 379/969 (39%), Positives = 558/969 (57%), Gaps = 65/969 (6%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHA 58 M P L ++DG + YRA+ AF P+ NS G T A+YG N L ++ +PTH Sbjct: 1 MTDSPSKRLFILDGMALAYRAHFAFFSNPIRNSKGVNTSAVYGFANTLLGILEHERPTHI 60 Query: 59 AVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVI 118 A FD T R +L+ YK++R MP++L Q+ + +++AM +P+L G EADD I Sbjct: 61 AACFDTSAPTARHKLYPAYKANRESMPEELSDQMPLIFRLLEAMNIPILRYEGYEADDTI 120 Query: 119 GTLAREAEK-AGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVP- 172 GTLAR A+ G + + DKD+ QL++ L ++ ++ ++G+ Sbjct: 121 GTLARIADGTEGFQTYMVSQDKDLGQLISSTCFLWKPGKRGNDHEVIDLAKLKEQWGIER 180 Query: 173 PELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTM 232 + ++D LALMGDSSDNIPG+PGVGEKTA+ L+ G ++ L + +K+ G Sbjct: 181 ADQVVDILALMGDSSDNIPGLPGVGEKTAKLLIGEFGSVENLLSNTDKLKG-------KR 233 Query: 233 AAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVE 292 +E+N +A LS QLATI +V L +T +L ++P+ EEL L ++ EF+ A + Sbjct: 234 KQIVEENGAMATLSKQLATIDRNVPLTVTLPELVKREPSPEELQALLQELEFRSMQAKLF 293 Query: 293 AGKWLQAKG--------AKPAAKPQETSVADEAPEVTATVIS------------------ 326 K + + PA + ++ A+ + V+ + Sbjct: 294 GKKAPEPRKAPLPADDLFAPAPRTEQPLSAEPSAPVSGARQNGSGQMDLFEERHLKTVDD 353 Query: 327 -YDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPV 385 Y+ E + A+LEK + FDTET L+ + NL+G+SF EP A Y+PV Sbjct: 354 FRHEYIIADTPEARSSMAAELEKYDSWCFDTETTGLNPLMDNLLGVSFCAEPHKAWYMPV 413 Query: 386 AHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLE 445 + LE ++PLLE K+G +LK+D +L GI ++G FDT+L Sbjct: 414 SGPA-----------DLEAVRPLLEGPA-EKIGHHLKFDLEVLRANGIHVKGPFFDTLLA 461 Query: 446 SYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQ--IALEEAGRYAAEDAD 503 ++ +H MD LAE L++ TI ++IA G + + + +E G+Y+AEDAD Sbjct: 462 HALIAPG-MKHGMDVLAENLLQYSTIKLKDIAAPGAKKRELDTSGVPVEVMGKYSAEDAD 520 Query: 504 VTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRL 563 +TLQL + + K G +F +E+PL+PVL+ +E +G+++ P+ L S ++ + Sbjct: 521 ITLQLSAVLKRQV-KESGMEKLFRTVELPLLPVLADMEFSGIRVLPESLEKASVKVGAII 579 Query: 564 AELEKKAHEIAGEEFNLSSTKQLQTILFEKQG-IKPLKKTPGGAPSTSEEVLEELALDYP 622 L ++ E AG NL+S KQL LF + +K KKT G T E+ L LA +P Sbjct: 580 DGLRERIEEAAGHPLNLNSPKQLGDFLFGELELVKKPKKTKTGQFVTDEDTLSALAPQHP 639 Query: 623 LPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVR 682 + IL YR KLKSTY D LP I P+ GR+HT +HQ +TATGRL+S DPNLQNIPVR Sbjct: 640 IIADILAYRENMKLKSTYLDALPKYICPRDGRIHTQFHQMLTATGRLASQDPNLQNIPVR 699 Query: 683 NEEGRRIRQAFIA-PEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEV 741 E+GR IR AF+ E Y ++SADYSQIELRIMA LS D + AF EG+DIH TAA V Sbjct: 700 TEQGRLIRTAFVPASEKYTMLSADYSQIELRIMAALSGDPAMCGAFREGRDIHTETAARV 759 Query: 742 FGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEY 801 +G+P + V + RR+AK +NFG+IYG+SAFGL+++L PR EA ++ YF ++P V + Sbjct: 760 YGIPRDQVDAVMRRAAKTVNFGIIYGISAFGLSQRLGCPRGEAATLIENYFTQFPVVKSF 819 Query: 802 MERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMI 861 ME +A++ GY ETL GRR +P+I S+N ++AAER AIN P+QGTAAD+IK AMI Sbjct: 820 MEDLVHKAEQAGYAETLLGRRRMIPEINSANKTIKSAAERTAINTPIQGTAADMIKIAMI 879 Query: 862 AVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLD--VPLLVEVG 919 VD L+ R R+I+Q+HDEL+ ++H+D++D + +I + M + L VP+LVE Sbjct: 880 HVDKLLK--GTRSRLILQIHDELLVDLHRDELD-LIPKIEEAMVSALPLPNGVPILVEAR 936 Query: 920 SGENWDQAH 928 +G NW +AH Sbjct: 937 TGGNWLEAH 945 >UniRef50_B4S5F3 DNA polymerase I n=12 Tax=Chlorobiaceae RepID=B4S5F3_PROA2 Length = 950 Score = 967 bits (2500), Expect = 0.0, Method: Composition-based stats. Identities = 380/936 (40%), Positives = 543/936 (58%), Gaps = 32/936 (3%) Query: 6 QNPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + L L+DG + +YRA+ A + G PTGA +G L L + Y P + AV FD Sbjct: 34 KPELFLLDGMALVYRAFFALQRADMKTRDGVPTGAAFGFLTTLLKIYETYAPDYLAVAFD 93 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 ++ KTFR E ++ YK++RP P+DL Q++ + +++A +P+L G EADD+IGT AR Sbjct: 94 SREKTFRHERYDAYKANRPQPPEDLITQLDFIFRLIEAFNIPILKQPGYEADDLIGTAAR 153 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPELIIDF 179 E E + I + DKDM QL+ +TL+ G E+ + G+ P+ ID Sbjct: 154 EFEPE-CRINIVSPDKDMTQLIHDGVTLLKPGKRQNELLRFGAAELKEELGIAPDQFIDL 212 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 L L GDSSDNIPG G+G KTA LL G LD + EK+ LE+ Sbjct: 213 LTLTGDSSDNIPGAKGIGPKTASKLLLSYGSLDEISKNLEKLP-------PRTRKSLEEF 265 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKW--L 297 L L TIKTD++L+ L+ QP E+L L ++ E + + + Sbjct: 266 LPERELIRDLVTIKTDIDLQTPLASLQCGQPDPEKLFPLLERLELRAIASKIPDLFPAIT 325 Query: 298 QAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTE 357 K P P+ A AP +T Y I EE L L FA DTE Sbjct: 326 PPKEIAPDNAPKVKREAHRAPTITEPPEDA-VYTLIDTEEELTTLTETLAGLSSFALDTE 384 Query: 358 TDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKV 417 T SL+ A LVG+S +++P A +I +P+ + E+AL +LKP+LE+ K Sbjct: 385 TTSLNTFEAELVGISISVKPQEAVFI------YCSPEGLKPEKALSILKPVLENPAIEKW 438 Query: 418 GQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIA 477 GQNLKYD +L NYGI+L FDTML SY++N H++D LA+R L+++T T+ E+ Sbjct: 439 GQNLKYDILVLKNYGIQLAPTGFDTMLASYVINPEET-HNLDDLAQRHLQYRTTTYSELC 497 Query: 478 GKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVL 537 G GK + Q+ LE YA +DAD+ L+L + L+ ++ + NIE PLV VL Sbjct: 498 GTGKKAVPLRQVPLEALKNYACQDADIALRLQNTLEKQLKDNQELEWLCRNIEFPLVNVL 557 Query: 538 SRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIK 597 +E G+ +D K L + ++ A+L+++ + AG FN+ S KQL ILF + G+ Sbjct: 558 VAMEYRGISLDTKHLEKTATKVASLTADLKERIYATAGSTFNIDSPKQLGEILFTRLGLP 617 Query: 598 PLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHT 657 K T G ST+ +VLEELA+ +P+ + ILEYR L KL+STY + LP ++NP TG++HT Sbjct: 618 AKKTTKTG-YSTNVQVLEELAMIHPIAQDILEYRSLQKLRSTYIEALPKILNPATGKLHT 676 Query: 658 SYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPED-YVIVSADYSQIELRIMAH 716 S++Q +TATGRLSS++PNLQNIP+R E G+ IR+AFIA + ++SADYSQIELRI A Sbjct: 677 SFNQHITATGRLSSSNPNLQNIPIRTELGKEIRKAFIASTNRNFLLSADYSQIELRIAAE 736 Query: 717 LSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQ 776 LS DK L+ AF +DIH ATA +F E VTS+ RR AK +NFG++YG+ +GL+ + Sbjct: 737 LSGDKKLIEAFRNQEDIHAATAKAIF--DTEDVTSDMRRKAKEVNFGVLYGIQPYGLSMR 794 Query: 777 LNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARR 836 LNI +KEA+ +D Y +YPG+ E ++ QA E G+V TL GRR Y+ + S NG R Sbjct: 795 LNISQKEAKAIIDTYKSKYPGLFEALDALVRQAAENGFVTTLLGRRRYIAALNSRNGNIR 854 Query: 837 AAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAV 896 AAERAA+N P+QGTAADIIK AM ++ +Q + M++QVHDELVFE ++++ + + Sbjct: 855 KAAERAAMNTPVQGTAADIIKYAMCLIENTMQEHKMHSTMLLQVHDELVFETNEEEHEKL 914 Query: 897 AKQIHQLMENCTRL----DVPLLVEVGSGENWDQAH 928 + M+ + VP+ V+ G G+NW AH Sbjct: 915 ETMVVASMKEAALVCGLKQVPVEVDTGIGKNWLDAH 950 >UniRef50_A7HD60 DNA polymerase I n=2 Tax=Cystobacterineae RepID=A7HD60_ANADF Length = 899 Score = 967 bits (2499), Expect = 0.0, Method: Composition-based stats. Identities = 360/929 (38%), Positives = 517/929 (55%), Gaps = 38/929 (4%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L L+DGS +++RAYHA P L+ + G PT A+YG ML + ++ PTH +V DA Sbjct: 2 PTLTLIDGSGFVFRAYHAIPHLSTTRGTPTNAVYGFTTMLLKALREHAPTHVVLVMDAGR 61 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 K+FR+E+ YK++RP PDDL+ Q + + A+ +P + GVEADDVI TLA A Sbjct: 62 KSFRNEIDPAYKANRPEAPDDLQVQFPLVREVADALAVPRIEEPGVEADDVIATLASRAR 121 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTM-----TNTILGPEEVVNKYGVPPELIIDFLA 181 + G V++ TGDKD QLV ++L + M GP EV K GV P+ +I+++A Sbjct: 122 EQGWEVVVVTGDKDFGQLVDERLSLYDPMAEASGRGGWTGPGEVEKKLGVRPDQVIEYMA 181 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 ++GD DN+PG+PG+GE TA AL++ G ++ + PE+I RG + + K+ ++E Sbjct: 182 ILGDKIDNVPGIPGIGEVTAAALVRHFGTVEEMLRRPEEIKAALSRGGEKVKEKIVASEE 241 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 + QL +++ D+ L Q E ++P + LF + EF R D+ A Sbjct: 242 RIRKNRQLVSLRRDLVLPFAPGQFERRRPDEARVRALFSELEFSRLLKDLPAPPPTPRTE 301 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 A A A Sbjct: 302 RAELILDAGALAAAVAALSAAP---------------------------AVGVRPVLGGP 334 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 + +VGL+ A G A Y+P+ H YL AP Q+S E A L+PLL + K + Sbjct: 335 APRTDPVVGLALA-GGGRAFYLPLRHQYLGAPAQLSAEEAAGALRPLL-SGELPKHAHDR 392 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 K + LA G+ L G DT L S +L H + +A + + + Sbjct: 393 KGVQHALAQLGLALGGPGADTDLASRLLLPTRREHALADVARERIGCELPRDPSGGDAAR 452 Query: 482 NQ--LTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 + + +E G +AA+ A L L + L + +G L ++ ++E PLVPVL Sbjct: 453 KSERVPVEGLEVERVGEWAAQCAASLLDLAPALERAL-ESEGLLPLYRDVERPLVPVLCE 511 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 +ER G+ +D + S E + +LE + H AG FN++ST++L +LF + + L Sbjct: 512 MERAGILVDRAAMEGMSAEFGRTMQDLEARIHAAAGHPFNIASTRELAQVLFTELALPVL 571 Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 K+ G PST ++VLE+LA + LP+++LE+R LAKLK TY D LP +++P+ GR+HT++ Sbjct: 572 KRLKTG-PSTDQDVLEKLAEQHELPRLVLEHRALAKLKGTYVDALPQLVDPRDGRIHTTF 630 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSR 719 HQA ATGRLSS+DPNLQNIPVR E RRIR AF+AP + ++SADYSQIELRI+AH S Sbjct: 631 HQAGAATGRLSSSDPNLQNIPVRTELSRRIRAAFVAPPGWRLLSADYSQIELRILAHYSD 690 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 D LL AF +D+H TAAE FG+ VTS+ RR AK +NFG+ YG+SAFGL+++L++ Sbjct: 691 DPALLEAFRLREDVHTRTAAETFGVATGEVTSDMRRIAKVLNFGIAYGLSAFGLSQRLDL 750 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 P EAQ +D YF RY GV Y+E+ A+ G TL GR +P+I + N A R AA Sbjct: 751 PGAEAQGIIDRYFARYAGVRRYVEKAVEDARATGESRTLFGRARAMPEIAARNPALRNAA 810 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 ER AIN P+QGTAADI+K AMI V L + R R+++QVHDELV EV +D++ V Sbjct: 811 ERTAINTPIQGTAADIVKVAMIRVHDALAGDARRARLLLQVHDELVLEVPEDELAPVEAL 870 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWDQAH 928 + + M +L VPL VEVG G +W +AH Sbjct: 871 VRREMGGAAQLKVPLDVEVGVGHSWAEAH 899 >UniRef50_Q0AVE2 DNA polymerase I n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AVE2_SYNWW Length = 866 Score = 966 bits (2498), Expect = 0.0, Method: Composition-based stats. Identities = 361/925 (39%), Positives = 533/925 (57%), Gaps = 68/925 (7%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 + IL+DG+S LYRA++A P L NSAG T +YG L M ++ + +PTH AV FD Sbjct: 3 DKFILIDGNSLLYRAFYALPLLHNSAGVYTNGVYGFLTMFNRVLAEIQPTHIAVAFDKDR 62 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 TFR+EL+ YK++R P++L Q + L ++ A+ + L + G EADD+IGTL+++AE Sbjct: 63 STFRNELYSEYKANRSAPPEELGGQFQLLRDVLAALNIEYLEMQGYEADDIIGTLSKKAE 122 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLAL 182 + G +I TGD D QLV+ + ++ T + P+ V +K+GV PE +++ L Sbjct: 123 EQGLKTVILTGDGDALQLVSEQVEVLLTKKGISEMELYDPQGVKDKWGVEPEKMVEIKGL 182 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 MGD+SDNIPGVPGVG KTA L+Q L+ LY ++ G K + KLEQN+E Sbjct: 183 MGDASDNIPGVPGVGPKTAMKLVQEFTSLENLYENLPQVKG------KKLVEKLEQNREQ 236 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A+LS QLATI D+EL+ + E +++P ELL L++ EF + ++ Sbjct: 237 AFLSRQLATINRDMELDFSIEDYVMREPHYPELLELYRSLEFNNFLKILQ---------- 286 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 K +E +A E+ + EE + A + ++++ A ++ Sbjct: 287 ---EKEREKGMAPLKQEIEVLFLER--------EEDVTALLEEIKQGESVALYFQSSYHH 335 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 + A+L G+ V + + L+ +K LLE K N K Sbjct: 336 PMWASLQGVFLEYSERVY----------QLKLEAGDDYKLQWIKALLESAVIKKYLHNAK 385 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 + + +L +GIELRG+A DTML +Y+ + ++D+ ++ L+ Sbjct: 386 FIQVLLLRHGIELRGVAGDTMLLAYVDDPAFEGDELDACLKKHLQ--------------- 430 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 L A A + +L+ ++ + + + +EMP+ VL+R+E Sbjct: 431 --------LNIAENNLAALVNTIRELYFQLEGQIPAE--LRELLQEVEMPMSEVLARMEF 480 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 GVK++ L SEEL +A E++ E+AG FN++S KQL +LFE G++ +KK Sbjct: 481 CGVKVERSTLARISEELASGIAGHEERIFELAGSSFNINSPKQLGKVLFEDLGLRVIKKG 540 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST EVLEEL ++ + IL YR L+K+KSTY D L +I+P+TGRVHT + QA Sbjct: 541 KTG-YSTGAEVLEELYQEHEIIAHILNYRQLSKIKSTYADALQELIHPETGRVHTIFKQA 599 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQIELRIMAHLSRDK 721 TATGRLSS +PNLQNIP+R EEGRRIRQAF+AP D++I++ADYSQI+LR +AH+S D+ Sbjct: 600 QTATGRLSSVEPNLQNIPIRMEEGRRIRQAFVAPGPDWLIMAADYSQIDLRSLAHISGDE 659 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 L+ F G DIH TA E+F +P+E V SE RR AKA+NFG+IYG+S FGLAR + R Sbjct: 660 RLIETFKSGVDIHTRTAVEIFHVPVEWVDSELRRRAKAVNFGIIYGISDFGLARDTGVSR 719 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 KEA+KY+D Y YPGV +YME + GYVETL RR YLP++ + N +A R Sbjct: 720 KEARKYIDNYLNSYPGVKKYMEDIVEFGRRHGYVETLLKRRRYLPELNARNKMVQAFGRR 779 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 A+N P+QGT+ADIIK AMI VD ++ + + R+++QVHDEL+ E+ + +++ V+ + Sbjct: 780 MALNTPVQGTSADIIKLAMIKVDEEIRKRRLQARLLLQVHDELLLELPRTELEEVSGLLR 839 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQ 926 MEN L VPL V + +G NW + Sbjct: 840 DCMENACSLKVPLEVSLKTGPNWYE 864 >UniRef50_Q3Z6P9 DNA-directed DNA polymerase I n=5 Tax=Dehalococcoides RepID=Q3Z6P9_DEHE1 Length = 903 Score = 966 bits (2497), Expect = 0.0, Method: Composition-based stats. Identities = 358/930 (38%), Positives = 534/930 (57%), Gaps = 36/930 (3%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPPLT-NSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 + + ++L DG++ ++RAYH PPL GE GA +G ++L ++ KP A+ F Sbjct: 1 MNKPVIVLFDGTNLVHRAYHVLPPLAIRKTGEVVGAAFGFASILIKVLTDLKPDCYAISF 60 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 D KG TFR E+F+ YK+ RPPMPD+L +Q+ + +V A +P+ SG EADDV+GTLA Sbjct: 61 DRKGPTFRHEMFKAYKAQRPPMPDELVSQLGRVRQIVDAFNMPVYEQSGFEADDVLGTLA 120 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTM------TNTILGPEEVVNKYGVPPELI 176 A AG V+I++GD D QLV P+I ++ + ++ V KYG+ PE I Sbjct: 121 TRAAAAGMEVIIASGDADSMQLVGPDIRILYPGPAGSFASTSLYDEVAVRAKYGLGPEHI 180 Query: 177 IDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKL 236 D+ ALMGD SDNIPGVPG+G KTAQ L++ GG++ +Y +KI+ + KL Sbjct: 181 ADYKALMGDPSDNIPGVPGIGPKTAQKLIEEYGGIEDIYKNLDKIS------PPGLQKKL 234 Query: 237 EQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKW 296 N EVA S L TI D+ L+ + E+ + ++++ LF++ EF R + G Sbjct: 235 ADNAEVARDSKILTTIVCDLPLDFSIEECRAEHYNRQKVVDLFRELEFFRLIDRLPGG-- 292 Query: 297 LQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDT 356 + P++ A + + D + + + +++L A A Sbjct: 293 --------------ENQLQGTPDMFAVASKVETRYMVADSQNIDSIVSRLANAKELALAV 338 Query: 357 ETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALK 416 + + A L L+ + G A ++P + Q+ L LL DEK K Sbjct: 339 SGTPEEAMDARLTALALSSAAGDACFVPAEFIGSASEGQMFAAEGHSGLAALLGDEKISK 398 Query: 417 VGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEI 476 N KY +L + G ++G+ FDTM+ +++L + L + E I Sbjct: 399 TAHNAKYLMNLLLSAGQAVKGLDFDTMIAAHLL--GEKNLAIKDLVFEHFGIEIADIENI 456 Query: 477 AGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPV 536 + + +F+++ L EA + A AD T +L L + + +++F +EMPL+P+ Sbjct: 457 LTRNGKKASFSEVQLSEAAQLA---ADYTFRLKGIFAAQLAETR-LMDLFARVEMPLLPI 512 Query: 537 LSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGI 596 L +ER G+ +D +L +E+ ++ +LE+ + AG FN+ S +QL ILF++ + Sbjct: 513 LLGMERTGIMLDTDLLKAMAEKTGRQIFKLEEDIYARAGHNFNIGSPQQLGRILFDELKL 572 Query: 597 KPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVH 656 +KKT G ST EVLEEL + + +ILEYR L KLKSTY D LP M+NP T R+H Sbjct: 573 PVIKKTKTG-YSTGAEVLEELKGKHRIVDLILEYRMLVKLKSTYLDTLPRMVNPHTRRLH 631 Query: 657 TSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAH 716 TS++Q TATGRLSS++PNLQNIPVR E GR IR+AFIAP V+++ DYSQI+LR++AH Sbjct: 632 TSFNQTRTATGRLSSSEPNLQNIPVRGEMGREIRRAFIAPPGTVLLAGDYSQIDLRVLAH 691 Query: 717 LSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQ 776 LS+D L+ AF +DIH ATAA + +P VT EQRR AK +NFG+IYGMS++GL + Sbjct: 692 LSQDPALIEAFQSDQDIHTATAARLLNIPPSKVTKEQRRLAKTVNFGVIYGMSSYGLEQA 751 Query: 777 LNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARR 836 + +EA K++ YFE+YP V Y + Q + QGYVETL GRR Y+P+I S N R Sbjct: 752 TELSLEEADKFIKAYFEKYPRVAVYFSEIKQQVRTQGYVETLLGRRRYIPEINSPNRILR 811 Query: 837 AAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAV 896 +AER AIN P+QGT+ADIIK AM+ +D L+ E+ + R+++QVHDEL+FEV K ++ + Sbjct: 812 ESAERMAINMPVQGTSADIIKLAMVRLDEKLKEEKLKSRLLLQVHDELIFEVPKTELGRM 871 Query: 897 AKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 + + + M ++PL VE+ SG NW Sbjct: 872 SDLLVETMSGAVAFEIPLKVELKSGANWGD 901 >UniRef50_A9G0B1 DNA polymerase I n=3 Tax=Sorangium cellulosum 'So ce 56' RepID=A9G0B1_SORC5 Length = 900 Score = 963 bits (2489), Expect = 0.0, Method: Composition-based stats. Identities = 398/923 (43%), Positives = 548/923 (59%), Gaps = 42/923 (4%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 L LVD S Y++RAYHA PL++ +GEPT A YG + ML L+ + KP + V D+ GKT Sbjct: 17 LYLVDLSGYVFRAYHAISPLSSPSGEPTHATYGTVAMLTKLVDERKPAYLGVAMDSPGKT 76 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FRDEL YK+HRPP P DL Q+ +V+A +P+ G+EADD++ A++ Sbjct: 77 FRDELDPRYKAHRPPPPPDLGVQMSRCREIVEAYRIPIFIQEGLEADDLVAVAVARAKER 136 Query: 129 GRPVLISTGDKDMAQLVT-PNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSS 187 G V+I++ DKD+ QLV + L + M + + G EVV K+GVPPE + D LAL+GD+S Sbjct: 137 GLRVVIASSDKDLMQLVDGEQVMLWDAMRDKVYGHPEVVAKFGVPPEQVRDLLALVGDTS 196 Query: 188 DNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSY 247 DN+PGVPGVG KTA LL G L +Y ++ + L+QN+ A LS Sbjct: 197 DNVPGVPGVGLKTAAELLAQFGSLSAIYERIGEVK------KPRIRESLQQNEADARLSQ 250 Query: 248 QLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAK 307 +L T+ + L E L L LF + F R+ V A + Sbjct: 251 KLVTLDGGAPVSLDLETLRYGGADTGRLRELFTELGFSRFLKAVRAPEPTARAA------ 304 Query: 308 PQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISAN 367 Y + E L+ + A A D S + +SA+ Sbjct: 305 ---------------------TYRVLTTREELEGFARSARAAGRLALDVLATSREPMSAH 343 Query: 368 LVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGI 427 + G++ A EPG A Y+P+ H YL AP Q+S ++ PLL D + KVG ++K+ I Sbjct: 344 VCGVALACEPGQAVYVPLGHRYLGAPAQLSMSDIDAVMGPLLADPELPKVGHDVKFCEVI 403 Query: 428 LANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK--GKNQLT 485 L + I L G++FDTML SY+L+ G++ + LAER L K T +E+A K G+ Q Sbjct: 404 LLRHRIGLVGVSFDTMLASYLLDP-EGKNQLHELAERELGAKMQTLDEVAPKRRGQAQRA 462 Query: 486 FNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGV 545 ++I L EA Y A ADV L L ++ P L+ K ++ IE+PL VL+ +E GV Sbjct: 463 LDEIELGEASSYGAAFADVALSLTDRLRPRLRAEK-LEDLLVQIELPLSAVLAEMELTGV 521 Query: 546 KIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGG 605 +DP+ L ++T LA LE+KA EI G + NL+S KQL+ +LF++ ++ +KT G Sbjct: 522 LVDPQALAQLGAQMTTELAALEQKAREIVGHDINLASPKQLEAVLFDELKLRSQRKTKTG 581 Query: 606 APSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTA 665 ST +VLE L+ ++P P V+LE+R +AKLK TY D LP +++P TGR+HT + QAV A Sbjct: 582 R-STDADVLEALSEEHPFPGVVLEHRAIAKLKGTYVDALPRLVHPGTGRIHTRWGQAVAA 640 Query: 666 TGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLT 725 TGRLSS DPNLQNIP+R E GR IR+AF+AP VIVSADYSQIELR++AHLS+D L+ Sbjct: 641 TGRLSSQDPNLQNIPIRTELGRMIRRAFVAPPGSVIVSADYSQIELRVLAHLSKDPVLVD 700 Query: 726 AFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQ 785 AF G+D+H TA E+FG+ VT+E RR +K INFG+IYGM LA++L+I R EA Sbjct: 701 AFRTGQDVHVRTAMEIFGVDQAGVTAEMRRRSKTINFGVIYGMGESALAKRLDISRAEAA 760 Query: 786 KYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAIN 845 +++D YF RY GV E+ME T A+AK V TL GRR LPD++SS+ RRA AER A N Sbjct: 761 RFIDAYFARYRGVHEFMEGTMAEAKRSESVRTLLGRRRLLPDLRSSDRMRRAQAERIAQN 820 Query: 846 APMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLME 905 P+QGTAAD++K AM+ V + P RM++ VHDEL FEV + VD ++ + ME Sbjct: 821 TPIQGTAADLLKLAMVRV---PRPVVPGARMVLTVHDELAFEVPAEAVDEAKAKVREAME 877 Query: 906 NCTRLDVPLLVEVGSGENWDQAH 928 + LDVPL+V+VG G W AH Sbjct: 878 SVFPLDVPLVVDVGHGPTWADAH 900 >UniRef50_Q04957 DNA polymerase I n=117 Tax=Firmicutes RepID=DPO1_BACCA Length = 877 Score = 960 bits (2483), Expect = 0.0, Method: Composition-based stats. Identities = 353/928 (38%), Positives = 517/928 (55%), Gaps = 59/928 (6%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 + L+L+DGSS YRA+ A P L N G T A+YG ML ++ + +PTH V FDA Sbjct: 2 KKKLVLIDGSSVAYRAFFALPLLHNDKGIHTNAVYGFTMMLNKILAEEEPTHMLVAFDAG 61 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 TFR E F+ YK R P +L Q L +++A +P + EADD+IGTLA A Sbjct: 62 KTTFRHEAFQEYKGGRQQTPPELSEQFPLLRELLRAYRIPAYELENYEADDIIGTLAARA 121 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLA 181 E+ G V + +GD+D+ QL +P++T+ T PE V KYG+ PE I+D Sbjct: 122 EQEGFEVKVISGDRDLTQLASPHVTVDITKKGITDIEPYTPEAVREKYGLTPEQIVDLKG 181 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGD SDNIPGVPG+GEKTA LL+ G ++ + A ++I G + L Q++E Sbjct: 182 LMGDKSDNIPGVPGIGEKTAVKLLRQFGTVENVLASIDEIKGE------KLKETLRQHRE 235 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 +A LS +LA I+ D +EL+ + + Q E+++ LFK+ F+ + +E+ + K Sbjct: 236 MALLSKKLAAIRRDAPVELSLDDIAYQGEDREKVVALFKELGFQSFLEKMESPSSEEEKP 295 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 A V +E A A E Sbjct: 296 LAKMAFTLADRVTEE------------------------------MLADKAALVVEVVEE 325 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 + A +VG++ E G P A L DE K + Sbjct: 326 NYHDAPIVGIAVVNEHGRFFLRP------------ETALADPQFVAWLGDETKKKSMFDS 373 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 K L GIEL G++FD +L +Y+L+ G D+ + A+ E + GKG Sbjct: 374 KRAAVALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVAAAAKMKQYEAVRPDEAVYGKGA 433 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 + ++ + A L +L++++ + +E PL +L+ +E Sbjct: 434 KRAVPDE---PVLAEHLVRKAAAIWALERPFLDELRRNE-QDRLLVELEQPLSSILAEME 489 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 GVK+D K L EEL +L +E++ +E+AG+EFN++S KQL ILFEK + LKK Sbjct: 490 FAGVKVDTKRLEQMGEELAEQLRTVEQRIYELAGQEFNINSPKQLGVILFEKLQLPVLKK 549 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILE-YRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 + G STS +VLE+LA + + + IL+ YR L KL+STY + L ++ P T +VHT ++ Sbjct: 550 SKTG-YSTSADVLEKLAPYHEIVENILQHYRQLGKLQSTYIEGLLKVVRPDTKKVHTIFN 608 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE-DYVIVSADYSQIELRIMAHLSR 719 QA+T TGRLSST+PNLQNIP+R EEGR+IRQAF+ E D++I +ADYSQIELR++AH++ Sbjct: 609 QALTQTGRLSSTEPNLQNIPIRLEEGRKIRQAFVPSESDWLIFAADYSQIELRVLAHIAE 668 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 D L+ AF DIH TA ++F + + VT RR AKA+NFG++YG+S +GLA+ LNI Sbjct: 669 DDNLMEAFRRDLDIHTKTAMDIFQVSEDEVTPNMRRQAKAVNFGIVYGISDYGLAQNLNI 728 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 RKEA ++++ YFE +PGV YME +AK++GYV TL RR YLPDI S N R+ A Sbjct: 729 SRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFA 788 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 ER A+N P+QG+AADIIK+AMI ++A L+ E+ + R+++QVHDEL+ E K++++ + + Sbjct: 789 ERMAMNTPIQGSAADIIKKAMIDLNARLKEERLQARLLLQVHDELILEAPKEEMERLCRL 848 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWDQA 927 + ++ME L VPL V+ G W A Sbjct: 849 VPEVMEQAVTLRVPLKVDYHYGSTWYDA 876 >UniRef50_A7NJD5 DNA polymerase I n=2 Tax=Roseiflexus RepID=A7NJD5_ROSCS Length = 972 Score = 957 bits (2473), Expect = 0.0, Method: Composition-based stats. Identities = 379/981 (38%), Positives = 549/981 (55%), Gaps = 71/981 (7%) Query: 3 QIPQNPLILVDGSSYLYRAYHAFPP--LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 + L+L+DG + YRA+HA L +S GEPT A+YG + + + I +Y+P +AAV Sbjct: 2 AHNRPLLLLIDGHALAYRAFHALAEAGLRSSTGEPTYAVYGFTSAMLNAIEEYQPEYAAV 61 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 FD GKTFRD+L+ YK++R P + Q+E + ++ A +P+ G EADDVIGT Sbjct: 62 AFDV-GKTFRDDLYAEYKANRAETPAEFEQQLERIKQVLAAFDIPIYTAEGYEADDVIGT 120 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLIN-------TMTNTILGPEEVVNKY-GVP 172 LAR+A + G VLI TGD D QLV ++T++ T G EV +Y G+ Sbjct: 121 LARQATERGVDVLILTGDTDTLQLVDDHVTVLLNNPYLRGPKNTTRYGVAEVTERYKGLR 180 Query: 173 PELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTM 232 P + D L GD SDNIPGV G+GE A ALL G ++ LY ++ K Sbjct: 181 PHQLADLRGLKGDPSDNIPGVKGIGEAGAIALLNQFGTIENLYDHLDE-------APKRY 233 Query: 233 AAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFK------- 285 LE +++A S +LATI D + L + ++ +F++ EF Sbjct: 234 QKHLEGQRDIALFSKKLATIVCDAPVTLNLADATLADYDRSRVIAVFQELEFGASLVKRL 293 Query: 286 ------------RWTADVEAGKWLQAKGAKPAAKPQETSVADEAPEV------------- 320 +A LQA P A S A+ Sbjct: 294 PPSGSTTVAQPLPSIPQADASAPLQADMFAPEAPAVRESSAEPQQLTLFGDPEVVPPPVA 353 Query: 321 ---TATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEP 377 + Y + L+A +A+L AP+ AFDTET ++ + +LVGLS A P Sbjct: 354 HVEAPLRAAPGEYRAACTDADLEAVVAELATAPLVAFDTETRGMNPLRDDLVGLSLATVP 413 Query: 378 GVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRG 437 G A YIPV H + Q+ R+R + L+ D KV N K+D +L G+ + G Sbjct: 414 GRAWYIPVGHTTGEM--QLPRDRVIAALRSFFADPARPKVAHNAKFDIEVLERAGMPVAG 471 Query: 438 IAFDTMLESYILNSVAGRHDMDSLA--ERWLKHKTITFEEIAGKGKNQLTFNQIALEEAG 495 ++FDTML + +L+ R ++ LA E L ++ GKGKNQ+TF ++ + A Sbjct: 472 LSFDTMLAAGLLD---KRRNLKDLAFYELELAEPLDAIGDLIGKGKNQVTFAEVPIARAT 528 Query: 496 RYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNH 555 RYAA DAD+TL+L + L+ ++F +EMPLVPVL R+E++G+ +D + Sbjct: 529 RYAAADADMTLRLQPALEAKLRAAGSLADMFYRLEMPLVPVLVRMEQSGILLDVPYMRAL 588 Query: 556 SEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFE---KQGIKPLKKTPGGAPSTSEE 612 E + LA++E++ IAG+ FN++S QL +LF L++T G S + + Sbjct: 589 GERMGRELAQIEQQIFAIAGKPFNINSGDQLSEVLFGPKINLPTTGLERTRTGRYSLTAQ 648 Query: 613 VLEELALDYP--LPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLS 670 LEEL + ++IL +R L+KLKSTY D+LP ++NP+TGRVHT Y+Q ATGRLS Sbjct: 649 ALEELQASDTTGIIELILRHRRLSKLKSTYVDELPALVNPETGRVHTDYNQLGAATGRLS 708 Query: 671 STDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEG 730 S PNLQNIP R EEGR +R+ FIA +V+++ADYSQIELR++AH++ D L+ F EG Sbjct: 709 SNSPNLQNIPTRTEEGREVRRGFIAAPGHVLIAADYSQIELRVLAHITGDPNLIQTFIEG 768 Query: 731 KDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDL 790 +DIH ATAA +FG+ V QRR AK + FG+IYG+S FGLA++L I R++A+ +D Sbjct: 769 RDIHAATAARLFGVGFNAVDKNQRRIAKTVVFGVIYGISPFGLAQRLGISREQARNLIDS 828 Query: 791 YFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQG 850 F ++P + +Y++RT + +GYV++L GRR + D+++S G RR AAER AIN P+Q Sbjct: 829 LFNQFPRIRDYIDRTLETGRNEGYVQSLFGRRRPMFDLRTS-GPRRQAAEREAINHPIQS 887 Query: 851 TAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCT-- 908 TAADI+K AMIAVDA L+ + R RM++QVHDEL+FE + +VD V + + ME Sbjct: 888 TAADIMKLAMIAVDAELRRRRLRTRMLLQVHDELIFEAPEAEVDEVVALVRERMEGVLSD 947 Query: 909 ---RLDVPLLVEVGSGENWDQ 926 VPL VE+ G NW++ Sbjct: 948 MHPPFAVPLRVEIEKGSNWEE 968 >UniRef50_B2IJU1 DNA polymerase I n=25 Tax=cellular organisms RepID=B2IJU1_BEII9 Length = 1043 Score = 955 bits (2470), Expect = 0.0, Method: Composition-based stats. Identities = 420/1019 (41%), Positives = 567/1019 (55%), Gaps = 105/1019 (10%) Query: 7 NPLILVDGSSYLYRAYHA-----FPPLTNSAGEPTGAMYGVLNMLRSLIMQ----YKPTH 57 + + LVDGSS+++RAY S PTGA+ L I + KPTH Sbjct: 33 DRVFLVDGSSFVFRAYFQSIRQDAKYNYRSDRLPTGAVRLFCTKLFQFIREGAADLKPTH 92 Query: 58 AAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDV 117 A++FD +FR E++ YKS+R P+DL Q + A V+A GL + EADD+ Sbjct: 93 LAIIFDKSENSFRKEIYPPYKSNRSEPPEDLIPQFPLMRASVRAFGLQPVEQDRYEADDL 152 Query: 118 IGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----------TILGPEEVVN 167 I T A +A G VLI + DKD+ QL+ P +++ + + +G EEVV Sbjct: 153 IATYATQAHALGAEVLIISADKDLMQLIGPGVSMYDPASGEAGAKGARQERRIGQEEVVA 212 Query: 168 KYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFR 227 +GV P+ +ID AL GDS+DN+PG G+G KTA L+ G LD L +I Sbjct: 213 YFGVGPDKVIDVQALAGDSTDNVPGARGIGIKTAAQLINDYGDLDNLLKLAREIKQ---- 268 Query: 228 GAKTMAAKLEQ--NKEVAYLSYQ-------------LATIKTDVELELTCEQL------- 265 L + + + +S + LA + Sbjct: 269 --PKRREILTEPESVGLIEISRKLVTLVRDVPVEIPLADLGLHAPEPHKLVAYLKALEFT 326 Query: 266 ----EVQQPAAEELLGLFKKYEFKRWT-ADVEAGKWLQAKGAKPAAKPQETSVADEAPEV 320 V + +L + F G+ L K E + A+ + EV Sbjct: 327 TLTKRVAEAYGVDLAAVEPDPAFCGAAGWRGRNGEVLVEAEPKAGEGATEPAGAEASGEV 386 Query: 321 T------------------------------------ATVISYDNYVTILDEETLKAWIA 344 A + Y TI+ E L A IA Sbjct: 387 ATRSGPKRNARYGEPVEKAALGSGPGLFASARAAEGRAGTFEHSAYQTIVTLEALDAVIA 446 Query: 345 KLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDA----------PD 394 +A + A DTET SLD + A+L GLS EPG A Y+PV H + P Sbjct: 447 AAYEAGLLAIDTETTSLDPMLADLAGLSLCAEPGKAFYVPVGHTSGEGQDLFEGKGLLPG 506 Query: 395 QISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAG 454 Q+ LE LKPLLED LK+GQN+KYD +L +G+E+R DT+L SY+L++ Sbjct: 507 QLPIGVVLERLKPLLEDPSILKIGQNVKYDWIVLKQHGVEMR-PLDDTLLLSYVLDAGLT 565 Query: 455 RHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWP 514 H MD L+E+ L HK I F +AG G+ + F ++A+++A YAAEDADVTL+L + P Sbjct: 566 DHGMDVLSEKHLGHKPIPFSAVAGSGRTFIGFARVAIDKATEYAAEDADVTLRLWRVLKP 625 Query: 515 DLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIA 574 L K V+E +E P++ VL+R+ER GV IDP +L S + +A E + +E+A Sbjct: 626 RLPAEK-MTTVYETLERPMIDVLARMERRGVAIDPPLLGRLSSDFAQDMARYEAEIYELA 684 Query: 575 GEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALD-YPLPKVILEYRGL 633 GE+FNL S KQL ILF K G+ KKT GA ST+ VLE+LA L IL++R L Sbjct: 685 GEKFNLGSPKQLGDILFGKLGLPGAKKTATGAWSTAAGVLEDLAEQGVDLAARILDWRQL 744 Query: 634 AKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAF 693 AKLKSTYTD LP INP +GRVHTSY A T TGRLSS++PNLQNIPVRNE GR+IR+AF Sbjct: 745 AKLKSTYTDALPNYINPSSGRVHTSYALAATTTGRLSSSEPNLQNIPVRNEAGRKIRRAF 804 Query: 694 IAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQ 753 IAP +VSADYSQIELR++AH++ K L AFAE DIH TA+E+FG+P+E + SE Sbjct: 805 IAPPGRKLVSADYSQIELRLLAHIADIKSLKNAFAENLDIHAMTASEMFGVPVEGMPSEI 864 Query: 754 RRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQG 813 RR AKAINFG+IYG+SAFGLA QL IPR+EA Y+ YFER+PG+ YM+ T+ +A+E G Sbjct: 865 RRRAKAINFGIIYGISAFGLANQLAIPREEAAAYIKKYFERFPGIRAYMDDTKKKARENG 924 Query: 814 YVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPR 873 YVET+ GR+ + P IK+SN + RA ERAAINAP+QG+AADII+RAMI ++A L AE+ Sbjct: 925 YVETIFGRKCHYPRIKASNPSERALNERAAINAPIQGSAADIIRRAMIHMEAALAAEKLS 984 Query: 874 VRMIMQVHDELVFEVHKDDVDAVAKQIHQLMEN----CTRLDVPLLVEVGSGENWDQAH 928 +M++QVHDEL+FEV D+V+A + ++M L VPL V+ + +NWD+AH Sbjct: 985 AQMLLQVHDELIFEVPDDEVEATIAVVRKIMVEAPLPAVHLSVPLQVDAKAAQNWDEAH 1043 >UniRef50_C9RNE9 DNA polymerase I n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RNE9_FIBSS Length = 972 Score = 955 bits (2469), Expect = 0.0, Method: Composition-based stats. Identities = 369/984 (37%), Positives = 546/984 (55%), Gaps = 71/984 (7%) Query: 4 IPQNPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 + + L+L+D + +R ++A+ PL NS GE M+G + ++ ++KPTH A+ Sbjct: 1 MAEKTLLLLDSFALAFRMFYAYSQNPLVNSKGEDVSMMHGYWGAVLRILAKHKPTHFAIA 60 Query: 62 FD-AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 D A KTFR EL+ YK++R PMP+++ AQ+ L ++A G+PLL+ G EADDV+ + Sbjct: 61 RDVAHTKTFRHELYPDYKANRGPMPEEMAAQMPLLCESMEASGIPLLSEPGYEADDVMAS 120 Query: 121 LAREAEKAGRP-VLISTGDKDMAQLVTPNITLINTMTN---TILGPEEVVNKYGVPPELI 176 A A AG V+I + DKDM+Q+VT I L + GP++V+ KYG+PPE I Sbjct: 121 AAEAAVNAGFDHVVIISKDKDMSQIVTDKIHLFHLEKGADGIDFGPQQVLEKYGIPPEKI 180 Query: 177 IDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKL 236 D+LALMGDSSDN+PGVP VG KTA LL G +D +YA + I K + L Sbjct: 181 RDYLALMGDSSDNVPGVPKVGPKTAIQLLTEYGDMDNIYANLDNIK------KKGLHDNL 234 Query: 237 EQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEA--- 293 NKE A+LS +L T++T + LE ++ L G+F+++E +E Sbjct: 235 ANNKEQAFLSRELVTLQTKRAYHGNLDALEFCGLHSDTLEGIFREHEINSLIRLLENVPS 294 Query: 294 -----------GKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAW 342 ++ + S + + + Y+ + ++E + Sbjct: 295 KTGFVRKDDSDDSAAGSESNGTSDDASGDSSNSKVVKASFPADLPPTYICVDNDEVFEQM 354 Query: 343 IAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVA-----AYIPVAHD---YLDAPD 394 + ++A DTETD LD + N+VGL A YIP+ H P Sbjct: 355 KKEFDEATEIGIDTETDGLDPMQCNIVGLCLAAAAKDGSVPKGYYIPLGHTDDIGFPYPA 414 Query: 395 QISRERALELLKPLLED----------------------EKALKVGQNLKYDRGILAN-Y 431 K D K V N K+D +LA + Sbjct: 415 GKGGNFDFNATKKWFIDFWNDSCTLPGDISDSGSKQPDSAKRSLVFHNAKFDLHVLARTF 474 Query: 432 GIELRGI----AFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFN 487 G+ + I DT++ +++L+ +D+ + L+H+ I E + G+GK Q+TFN Sbjct: 475 GLTQKQIDSANIIDTLIAAWMLSPGQTGLGLDNQVMQLLQHEMIPIENLIGRGKKQITFN 534 Query: 488 QIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKI 547 + +++A Y AEDA TL+L + LQK+ F + EMPL+ VL ++E G + Sbjct: 535 RTPIKDATEYGAEDAVYTLRLWAPLRAKLQKYD-YEKYFFSQEMPLLKVLYQMEGVGAFV 593 Query: 548 DPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAP 607 D K+L +L R+ +LEK+ ++AG EFN+ S KQL +LF+ G+ +KK Sbjct: 594 DTKILKKLQTDLEHRIEKLEKEICDMAGCEFNIGSPKQLGEVLFDTLGLPEIKKR----- 648 Query: 608 STSEEVLEELA--LDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTA 665 ST VLEEL+ +P+ ++EYR L K++STY LP ++NP T R+HTS+ Q TA Sbjct: 649 STDAAVLEELSFRSAHPIVFAVIEYRELKKMQSTYVSVLPTLVNPDTKRIHTSFIQWGTA 708 Query: 666 TGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQIELRIMAHLSRDKGLL 724 TGRLSS DPNLQNIPVR++ G++IR AF+ + VI++ DYSQIELR++AHLS D+ L+ Sbjct: 709 TGRLSSRDPNLQNIPVRSDLGKQIRAAFVPQNPNNVILAVDYSQIELRMLAHLSGDEALI 768 Query: 725 TAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEA 784 ++ EG DIH TAA + + LE VT++ RR AK +NFG++YGM+AF L+R L IP +A Sbjct: 769 ESYKEGIDIHARTAAAINRVSLEDVTADMRRDAKVVNFGVLYGMTAFRLSRDLKIPMAQA 828 Query: 785 QKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAI 844 + ++D YFE Y GV ++++ T+A A GYVETL GRR Y+ I SS+ AER A+ Sbjct: 829 KSFIDGYFEMYQGVQKFIDDTKAAAHRDGYVETLSGRRRYIAGIDSSDRMESQMAERMAV 888 Query: 845 NAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLM 904 N P+QG+AAD+IK AMI + + E +RM++QVHDELVFE KD V+A++ + M Sbjct: 889 NTPVQGSAADLIKIAMIRIQKRINDENLPLRMMLQVHDELVFECPKDQVEALSAMVKSEM 948 Query: 905 ENCTRLDVPLLVEVGSGENWDQAH 928 E L VPL+ VG G+NW +AH Sbjct: 949 EGAMELKVPLVASVGFGKNWLEAH 972 >UniRef50_C0QYF7 DNA polymerase I n=3 Tax=Brachyspira RepID=C0QYF7_BRAHW Length = 920 Score = 955 bits (2469), Expect = 0.0, Method: Composition-based stats. Identities = 349/935 (37%), Positives = 537/935 (57%), Gaps = 28/935 (2%) Query: 6 QNPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + +++D LYR + F PL NS G+ ++ G + SLI Y + A+ D Sbjct: 2 KKTFLIIDAFGILYRYHFIFLKRPLLNSKGQNVSSINGFMRTYFSLINTYPAEYVAIALD 61 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 + KTFR+E+++ YK +R MPDDLR+QI L+ ++ A+G+ + + EADD++GT+A Sbjct: 62 SSRKTFRNEIYKEYKENRESMPDDLRSQIPILYNLIDALGISRIVLDNYEADDIVGTIAE 121 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI---LGPEEVVNKYGVPPELIIDFL 180 +K +I + DKD+ QLV ++ ++ + + + V K GV P IID L Sbjct: 122 RNKKENIKTIIYSPDKDILQLVDDDVKVVASNKDNELMEYDAQAVKEKRGVYPNQIIDLL 181 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 +LMGD+SDNIPGV GVGEKTA LL+ LD +Y + I G + KL ++K Sbjct: 182 SLMGDASDNIPGVKGVGEKTALKLLEEYKSLDGIYENIDSIKG-------KIQEKLLESK 234 Query: 241 EVAYLSYQLATIKTDVE-LELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 ++AY+SY+LATI+ ++E L ++ + +E+ + + E K+ + + + + Sbjct: 235 DMAYMSYKLATIERNIEGFNLDYNEIASSKINIDEVNKILDELELKQIRDKINSYIYGSS 294 Query: 300 KGAKPAAKPQETSVADEAPEVTATVI-----SYDNYVTILDEETLKAWIAKLEKAPVFAF 354 K + D + I + +Y I +E L+ + + + Sbjct: 295 KKEDKVKISNDKINKDNDSKTEEAPILSAKDNKSSYYLIENETELENLLKDINSKKLVCI 354 Query: 355 DTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKA 414 D ET LD ++G+SFAI+ A Y+ ++ +I +++ + L+ LE E Sbjct: 355 DFETTGLDTFKDTIIGISFAIKSNEAFYLDLSGRT-----KIDKDKCMNLVFDTLEKEDI 409 Query: 415 LKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFE 474 +G NLKY+ ++ G + + FDTM+ +Y++N GR++MD LA +L + TI + Sbjct: 410 KVIGHNLKYEYKMMRAIGKSIGNMYFDTMVAAYLINPTRGRYNMDDLAIAYLSYNTIKYA 469 Query: 475 EIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLV 534 ++ K T L++ YA EDADVT + + P L+ H ++F NIEMPLV Sbjct: 470 DLTDNAKK--TLLDAPLKDVVEYACEDADVTFRFYECFAPLLKTH-NLEDLFFNIEMPLV 526 Query: 535 PVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQ 594 VL+ +E +GV I + + S+E + L + ++K ++ AGEEFNL S KQL+ ILF+K Sbjct: 527 SVLADMEFDGVYISSERMKALSDEYSSLLEKTKEKIYKEAGEEFNLQSPKQLEYILFDKM 586 Query: 595 GIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGR 654 GI P KKT G ST EEVL EL+ Y + + +L YR AKLK+TY D P +IN KTGR Sbjct: 587 GIPPTKKTKTG-FSTDEEVLTELSQKYKIAEYMLTYRKYAKLKNTYLDVFPTLINEKTGR 645 Query: 655 VHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIM 714 +H S++Q VTATGRLSS++PNLQNIPVR EEGR IR FI + ++++ADYSQIELR++ Sbjct: 646 IHASFNQTVTATGRLSSSEPNLQNIPVRGEEGREIRNTFIPEKGNLLIAADYSQIELRLL 705 Query: 715 AHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLA 774 AH S D L+ AF DIHR TA +++ + E VT+ R AK INF +IYG +AFGL+ Sbjct: 706 AHFSNDPTLVEAFKNNDDIHRKTAMKIYSVSKEHVTASMRNIAKIINFSIIYGKTAFGLS 765 Query: 775 RQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYL-PDIKSSNG 833 ++L I RKEA+ ++ YF Y V + E + + +G+V T+ GR L I SSN Sbjct: 766 KELGIKRKEAEDFIKGYFSTYSRVKPFCEEVVEEVRNKGFVRTMCGRIRDLSKTINSSNA 825 Query: 834 ARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDV 893 R AER A+N +QG+AAD+IK AM+A+ + +++MQVHDELV EV + + Sbjct: 826 MARNEAERMALNTLIQGSAADMIKVAMVAIHKEFKNHLKTAKIVMQVHDELVVEVSEAEA 885 Query: 894 DAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 D + ++ME+ + +VP++V++ G +W + H Sbjct: 886 DKAMTIMKEIMEHSVKANVPIIVDIHKGNSWGEVH 920 >UniRef50_B1WPN5 DNA polymerase I n=13 Tax=Bacteria RepID=B1WPN5_CYAA5 Length = 970 Score = 955 bits (2469), Expect = 0.0, Method: Composition-based stats. Identities = 365/986 (37%), Positives = 530/986 (53%), Gaps = 76/986 (7%) Query: 1 MVQIPQ-NPLILVDGSSYLYRAYHAFP-----PLTNSAGEPTGAMYGVLNMLRSLIMQYK 54 M L+L+DG S +RAY+AF PL S G PT +G LN L I Sbjct: 1 MSDQSNLPLLMLIDGHSLAFRAYYAFAKARKGPLRTSTGIPTSVCFGFLNSLIQAIKLEN 60 Query: 55 PTHAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEA 114 P + A+ FD+K TFR E +YK+ R P+D I L +++A+ + ++ G EA Sbjct: 61 PQYIAIAFDSKEPTFRHEADVNYKADRKETPEDFIPDILNLQRLLEALNITIITAPGYEA 120 Query: 115 DDVIGTLAREAEKAGRPVLISTGDKDMAQLVTP--NITLINTMTN----------TILGP 162 DDV+GT+A + + G V I +GD+D+ QLV +++++ N T Sbjct: 121 DDVLGTVATKGSQEGYRVKIVSGDRDLFQLVNDDNHLSVLYLERNAVKSSSGEGYTEFNV 180 Query: 163 EEVVNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIA 222 E V K G+ P +ID+ AL GD SDNIPGV G+GEKTA LL G L+ +Y E+I Sbjct: 181 EAVTEKMGIKPTQVIDYKALCGDKSDNIPGVRGIGEKTAVKLLSEYGTLEAVYNNIEEIK 240 Query: 223 GLSFRGAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKY 282 G + KL++ K+ A S LA I TD LE E+ E++ + + + ++ Sbjct: 241 GAN-------QKKLKEGKKEAEHSQYLAEIVTDAPLEFQIERCELKGFNFDAVKPILEEL 293 Query: 283 EFKRWTADVEAGKW-------LQAKGAKPAAKPQETSVADEAPEV--------TATVISY 327 E K++ ++ + L+ + + S+ D+ PE T S Sbjct: 294 ELKKFIKEINQLQEHFGGNITLEVHEKINKNETHQLSIFDDVPEKVEPVNNIKEETKESL 353 Query: 328 DNYVTILDEETLKAWIAKL----EKAPVFAFDTETDSLDNISANLVGLSFAIEPG--VAA 381 N I + E L + KL A+DTET L+ ANLVG+ A Sbjct: 354 INPQIITEIEQLHELVDKLSTFTNANIPVAWDTETTDLNPRQANLVGIGCCWGNNPTDIA 413 Query: 382 YIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFD 441 YIP+ H Q+ +E+ L+ L+ +LE KV QN K+DR I + I L G+ FD Sbjct: 414 YIPIGHKQ---GKQLKKEQVLDSLRTILESSDYPKVFQNTKFDRLIFKHQAINLDGVVFD 470 Query: 442 TMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAED 501 TML SY+L+ H + L E++L+ T + G K Q T + +E+ Y D Sbjct: 471 TMLASYVLHP-EKSHKLSELCEQYLEGITCQNYDELGISKKQ-TIADLDIEKVAEYCGMD 528 Query: 502 ADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTL 561 A T L + +LQ+ + +E PL VLS +E G+ ID + L S+EL Sbjct: 529 AYGTFLLVEPLKNELQQVPTLEQLLLEVEQPLEAVLSIMEDTGILIDTEYLGKLSKELEQ 588 Query: 562 RLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQ--GIKPLKKTPGGAPSTSEEVLEELAL 619 L+ LEKKA++ A E+FNL S KQL ILFEK K +KT G ST LE+L Sbjct: 589 ELSSLEKKAYDAAEEKFNLGSPKQLGEILFEKLELNRKKSRKTKTG-YSTDHATLEKLKG 647 Query: 620 DYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNI 679 D+P+ ILEYR L+KLKSTY D LP ++N KT R+HT+++Q+VTATGRLSS++PNLQNI Sbjct: 648 DHPIIDYILEYRTLSKLKSTYIDALPELVNKKTKRIHTNFNQSVTATGRLSSSNPNLQNI 707 Query: 680 PVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAA 739 P+R E R+IRQAFI +D+++VSADYSQIELRI+AHLS++ LL A+ +D+H TA Sbjct: 708 PIRTEFSRQIRQAFIPQKDWLLVSADYSQIELRILAHLSQESVLLNAYQNAEDVHTVTAK 767 Query: 740 EVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVL 799 +F E +T ++R K INFG+IYGM + AR+ + E +++++ Y +RY V Sbjct: 768 LLFEK--EEITPQERNLGKTINFGVIYGMGSQRFAREAGVSATEGKEFINKYRQRYAKVF 825 Query: 800 EYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE------------------R 841 EY+E + +A GYV T+ GRR Y + R R Sbjct: 826 EYLENMKKEAIANGYVTTILGRRRYFNFFDDNLYRFRGHDPQTIDLNKLNINYNDSQLLR 885 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 AA NAP+QG++ADIIK AM+ + L + +++QVHDELVFE+ + + + + +I Sbjct: 886 AAANAPIQGSSADIIKIAMVKIQEIL--NYYQANLLLQVHDELVFEIPEKEWEELNHKIK 943 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQA 927 + MEN +L +PL+VE+ +G+NW +A Sbjct: 944 ETMENAVKLTIPLVVEIHAGKNWMEA 969 >UniRef50_B0KAJ0 DNA polymerase I n=12 Tax=Thermoanaerobacterales RepID=B0KAJ0_THEP3 Length = 872 Score = 954 bits (2467), Expect = 0.0, Method: Composition-based stats. Identities = 348/923 (37%), Positives = 524/923 (56%), Gaps = 61/923 (6%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 + +++DGSS +YRAY+A P LT S G T A+YG ML LI + KP + A+ FD K Sbjct: 2 SKFLVIDGSSLMYRAYYALPMLTTSEGLHTNALYGFTMMLIKLIEEEKPDYIAIAFDKKA 61 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 TFR + ++ YK+ R MP++L Q++ L +++ + +L + G EADD+IGT+++ AE Sbjct: 62 PTFRHKEYQDYKATRQAMPEELAEQVDLLKEIIEGFNIKILELEGYEADDIIGTISKLAE 121 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLAL 182 + VL+ TGD+D QLV+ + + + + V+ +Y + P ID L Sbjct: 122 EKEMEVLVVTGDRDALQLVSDKVKVKISKKGITQMEEFDEKAVLERYEITPHQFIDLKGL 181 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 MGD SDNIPG+P +GEKTA LL+ G ++ L ++ G + +E NKE+ Sbjct: 182 MGDKSDNIPGIPNIGEKTAIKLLKDFGTIENLLQNLSQLKG-------KIKENIENNKEL 234 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A +S +LATIK D+ +E+ E+ V+ E+LL LF K EF ++ ++ Sbjct: 235 AIMSKKLATIKRDIPIEIDFEEYRVKDFNEEKLLELFNKLEFFSLIDSIKKKNNVEIVNN 294 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 K + +K IA L+ + AF Sbjct: 295 HKVQKW--------------------------SKVDIKKLIALLQDSKSIAFY-----PL 323 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 + ++F+ ++ LK + E EK +K Sbjct: 324 IYEGEIKKIAFSFGNDTVYIDGFQ---------------IKDLKEIFEKEKFEFTTHEIK 368 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 L+ GIE + DT + +Y+LN +D+D + +++LK ++EE+ GKG++ Sbjct: 369 DFLVKLSYKGIECKSKYMDTAIMAYLLNPSESNYDLDRVLKKYLKVDVPSYEEVFGKGRD 428 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 + +I + Y L K+ +++ + IEMPLV VL +E Sbjct: 429 KKKLEEIGEDILADYICSRCVHLFDLREKLMNFIEEMD-MKRLLLEIEMPLVEVLKSMEV 487 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 +G +D +VL S+++ R+AE+ K ++ AG +FN++S KQL LFEK + +KKT Sbjct: 488 SGFTLDKEVLKELSQKINDRIAEILDKIYKEAGYQFNVNSPKQLSEFLFEKLNLPVIKKT 547 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST EVLE+L + I+EYR L KLKSTY + +++ + RVH+++ Q Sbjct: 548 KTG-YSTDSEVLEQLVPYNNIVNDIIEYRQLTKLKSTYINGFLPLMD-ENNRVHSNFKQM 605 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQIELRIMAHLSRDK 721 VT+TGR+SST+PNLQNIP+R E GR+IR+AFI +D IVSADYSQIELR++AH+S D+ Sbjct: 606 VTSTGRISSTEPNLQNIPIREEFGRQIRRAFIPRTKDGYIVSADYSQIELRVLAHVSGDE 665 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 L+ +F +DIH TA+EVF +P+E VT E RR+AKA+NFG+IYG+S +GL+R L I R Sbjct: 666 KLIESFMNNEDIHLRTASEVFKVPMEKVTPEMRRAAKAVNFGIIYGISDYGLSRDLKISR 725 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 KEA++Y++ YFERY GV EY+E+ AKE GYV T+ RR Y+P+I S N +R+ AER Sbjct: 726 KEAKEYINNYFERYKGVKEYIEKIVRFAKENGYVITIMNRRRYIPEINSRNFTQRSQAER 785 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 A+NAP+QG+AADIIK AM+ V L+ + + ++I+QVHDELV + +KD+V+ V K + Sbjct: 786 LAMNAPIQGSAADIIKMAMVRVYNDLEKLKLKSKLILQVHDELVVDTYKDEVEIVKKILK 845 Query: 902 QLMENCTRLDVPLLVEVGSGENW 924 MEN +L VPL+VE+G G NW Sbjct: 846 DNMENVVQLKVPLVVEIGVGPNW 868 >UniRef50_B6YQQ9 DNA polymerase I n=13 Tax=Bacteroidales RepID=B6YQQ9_AZOPC Length = 928 Score = 951 bits (2459), Expect = 0.0, Method: Composition-based stats. Identities = 375/943 (39%), Positives = 547/943 (58%), Gaps = 38/943 (4%) Query: 8 PLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 L L+D + +YRAY++F PL NS G T A++G +N L +++ + PTH V FD Sbjct: 2 KLFLLDAYALIYRAYYSFIKMPLINSKGFNTSAIFGFVNTLDNILRRENPTHIGVAFDPI 61 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 TFR ++F+ YK+ R P+ +R I + +V A +P+L VSG EADDVIGT+A++ Sbjct: 62 EPTFRHQVFKQYKAQREETPETIRLSIPIIKDIVSAYHIPILEVSGYEADDVIGTVAKKT 121 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYG-VPPELIIDFL 180 + + T DKD QLV +I + ILG +E+ KYG + P +IDFL Sbjct: 122 S-RDYEIFMMTPDKDYGQLVDEHIFIYKPRYRKDGFEILGVKEIKEKYGFISPIQMIDFL 180 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 LMGDSSDNIPG PG+GE TA+ L+ G ++ L + G+ + K+E+NK Sbjct: 181 GLMGDSSDNIPGCPGIGEITAKKLIARFGSIENLLKNVHFLNGI-------LKTKIERNK 233 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 E S LATIKTDV + +L + L +F+K EF + + K Sbjct: 234 ETILFSKFLATIKTDVPINFNPNELIREDIDKPVLKKIFEKLEFHQLVSRFFGEKRSVLS 293 Query: 301 GAKPAAKP--QETSVADEAPEVTATVISY--------DNYVTILDEETLKAWIAKLEKAP 350 K + ++ E T TV+S Y I + + I K++ Sbjct: 294 IKKQFSSSLLFTDKFVEKNNEKTETVLSNFDNLSTVLHKYRVIDKQSDIGDLINKIKIQN 353 Query: 351 VFAFDTETDS---LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKP 407 F+F+ +T +D +SA LVG++F ++ G A ++P + ++L K Sbjct: 354 FFSFNIKTTEAIEIDPLSAELVGIAFTLQEGEAYFLPF------FGRKRDIIPTVQLFKE 407 Query: 408 LLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLK 467 + E + LKVGQNLKYD +L YGI + FD ++ Y++N H++D LA+ +L Sbjct: 408 IFESDTILKVGQNLKYDINVLKKYGIRMNYPIFDILIAHYLINP-EYLHNLDFLAKTYLN 466 Query: 468 HKTITFEEIAG-KGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVF 526 ++ I EE+ G K ++QL+ Q+ L YA E+AD+ L+L P ++K N+F Sbjct: 467 YRIINTEELIGSKKESQLSVRQVPLSLLADYACENADIVLKLKNIFEPIIRKS-NFSNLF 525 Query: 527 ENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQL 586 IE+PLV VLS +E GVK+D L ++S L L +EK +I+G+ FN++S K + Sbjct: 526 YRIELPLVFVLSDMEEFGVKLDISALKDYSVVLNRYLESIEKIIFQISGKIFNVNSPKMV 585 Query: 587 QTILFEKQGI-KPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLP 645 ILF+ I + KKT G +TSE +LE L +P+ IL+YR KL +TY D LP Sbjct: 586 GEILFDHLKIIENSKKTKSGQYATSEGILENLKKKHPIVGEILKYRKSKKLLTTYIDTLP 645 Query: 646 LMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSAD 705 +++ ++HT+Y+QA TATGRLSS PNLQNIP+R++EG+ IR+ FI ++ + +SAD Sbjct: 646 TLVSFIDKKIHTTYNQATTATGRLSSNSPNLQNIPIRDKEGKEIRRVFIPDDNCLFLSAD 705 Query: 706 YSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLI 765 YSQIELRIMAHLS DK +L AF G+DIH A A+ +FG+PL +T + RR AK NFG+I Sbjct: 706 YSQIELRIMAHLSEDKNMLEAFRNGQDIHSAIASIIFGVPLAEITCDMRRKAKITNFGII 765 Query: 766 YGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYL 825 YG+S FGLA QL + R A++ ++ YF +P + Y++R+ A A++ GYVET+ R+ +L Sbjct: 766 YGISVFGLAEQLQVSRFIAKELINKYFMIFPDIKNYIDRSIAIARKDGYVETIFRRKRFL 825 Query: 826 PDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELV 885 PDI S N R AER +INAP+QG+AADIIK AM + L + +MI+QVHDEL Sbjct: 826 PDINSRNSVVRKYAERNSINAPIQGSAADIIKVAMNRIHRRLIDNDLQSKMIIQVHDELN 885 Query: 886 FEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 F V D++D V + + ME+ T L VPL+V G G+NW +AH Sbjct: 886 FNVFIDELDKVKQIVVYEMEHATHLKVPLVVNCGIGKNWLEAH 928 >UniRef50_A5CXW1 DNA polymerase I n=2 Tax=sulfur-oxidizing symbionts RepID=A5CXW1_VESOH Length = 909 Score = 951 bits (2459), Expect = 0.0, Method: Composition-based stats. Identities = 418/925 (45%), Positives = 594/925 (64%), Gaps = 23/925 (2%) Query: 8 PLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 LIL+DGS++L+RAY + LTN G PTGAM+GV+N ++SL +Y+ ++FDA+ Sbjct: 4 KLILMDGSAFLFRAYFSTLKQNLTNQNGFPTGAMFGVINAMKSLQRKYQEARIIIIFDAR 63 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 GK FR ++ YK++R P+ L QIEPL+ M++AMG+ + VS VEADDVI TL+ A Sbjct: 64 GKNFRHNIYPQYKANRKPIDGGLVVQIEPLYEMIQAMGIHFICVSKVEADDVIATLSCCA 123 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185 + +I++GDKD+ QLV NI+ +N M + + V+ K GV PE I+DFLAL GD Sbjct: 124 NQNNIKTIIASGDKDLMQLVGTNISQLN-MKGVLHDRQSVIEKIGVAPEKILDFLALTGD 182 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 S+DNIPGVP VG KTA LQ + + +I G + KL N ++ L Sbjct: 183 SADNIPGVPSVGPKTAIKWLQIYSDILGIKENAMQIKG-------KVGEKLRDNFDLLDL 235 Query: 246 SYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPA 305 SYQL +K DV L + ++L L+++Y F W ++ L+ K + Sbjct: 236 SYQLVKLKFDVVLPCNILD-DEPVKNIDKLANLYQQYGFFMWLKQLDNVSVLKQKSIQVI 294 Query: 306 AKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNIS 365 D + ++ + + +LD + +++L+ F F + SLD ++ Sbjct: 295 GT-------DTGVNNSVDILKGYSQILVLDLDIFNTMVSRLKILKTFVFSLKATSLDYMN 347 Query: 366 ANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDR 425 A++VG F I + Y+PV HDY+DAP Q++ L LKP+LED K+GQNLKYD Sbjct: 348 ASIVGWVFLI-DKDSFYVPVNHDYIDAPKQLNFNDVLNQLKPILEDVSISKIGQNLKYDA 406 Query: 426 GILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLT 485 IL+NY I+L+GI+ D +++SY LNSVA RH+M+ L+E +L ++TI F +I GKGK Q+T Sbjct: 407 HILSNYKIDLQGISDDVIVKSYCLNSVATRHNMNDLSEYYLNYQTINFVDILGKGKKQVT 466 Query: 486 FNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGV 545 FNQ+ +E A Y E+ +T L+ + ++ ++ + +++N+E+PL+ VL +ERNGV Sbjct: 467 FNQVNVEIALLYVCENVIITSLLNHMLDEEIAQYPRLVKLYQNLELPLIKVLLCMERNGV 526 Query: 546 KIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEK--QGIKPLKKTP 603 ++D +L ++T ++ +++ + E+A FNL S KQ+Q ILFE G+ PL+KTP Sbjct: 527 ELDVNILSTQQLDITQQMEDIKNQVFELADNVFNLESPKQIQRILFESKGLGLIPLRKTP 586 Query: 604 GGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAV 663 G PST+EE L+ L D+P+ +IL YR LAKL STY + LP I+ T R+HTSY+Q V Sbjct: 587 KGVPSTNEEALKLL--DHPVVDLILSYRTLAKLNSTYLEVLPRKIDLNTHRLHTSYNQVV 644 Query: 664 TATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGL 723 TATGRLSS++PNLQNIP+ +E+G IR AFI + VI+SADYSQIELRIM LS+D+ L Sbjct: 645 TATGRLSSSNPNLQNIPIFSEQGSCIRGAFITGKGNVIISADYSQIELRIMTQLSKDQNL 704 Query: 724 LTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKE 783 L AF KD+H TA+ +F +P++ VTSE RR AKAINFGLIYGMSA+GLA+Q+ + R + Sbjct: 705 LEAFNNDKDVHSETASTMFNIPIDEVTSEYRRRAKAINFGLIYGMSAYGLAKQIGVSRTK 764 Query: 784 AQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAA 843 A++YMD YF+ YP VL YM+ + AK QGYVET+ GRRLYLP I + N + A R A Sbjct: 765 AKQYMDTYFDNYPSVLYYMDNIKEIAKVQGYVETIMGRRLYLPQINAKNKMLQQHALRTA 824 Query: 844 INAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQL 903 INAPMQG++ADIIK++M V W+ + P +RMIMQVHDELVFEV D +++I L Sbjct: 825 INAPMQGSSADIIKKSMFDVYTWIGQDNPDIRMIMQVHDELVFEVSASKADEFSRKIQAL 884 Query: 904 MENCTRLDVPLLVEVGSGENWDQAH 928 M N LD+PL V+VG G +W +AH Sbjct: 885 MSNTYLLDIPLKVDVGIGNSWKEAH 909 >UniRef50_P74933 DNA polymerase I n=3 Tax=Bacteria RepID=DPO1_TREPA Length = 997 Score = 950 bits (2455), Expect = 0.0, Method: Composition-based stats. Identities = 345/1007 (34%), Positives = 502/1007 (49%), Gaps = 97/1007 (9%) Query: 6 QNPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + L L+D +YR+YHAF PL N +G A+YG L +L+ Y+P + VFD Sbjct: 4 KKTLYLLDAYGLIYRSYHAFARAPLINDSGANVSAVYGFFRSLHTLLCHYRPRYFVAVFD 63 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 + TFR + YK+ R +L AQI + ++ A+G+ +L G EADD+I TLA+ Sbjct: 64 SLTPTFRHVQYPAYKAKRDKTSAELYAQIPLIEEILCALGITVLRHDGFEADDLIATLAK 123 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINT---MTNTILGPEEVVNKYGVPPELIIDFL 180 V+I + DKD+ QLV + ++ T V ++ V P ++D Sbjct: 124 RVAAEHCHVVIISSDKDVLQLVCDTVQVLRLDIDHKWTCCDAAYVQQRWTVMPTQLLDLF 183 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 +LMGDSSDN+PGV G+G KTA LL G LD +Y + + + K+ K Sbjct: 184 SLMGDSSDNVPGVRGIGPKTAAHLLHCFGTLDGIYRHTYSLK-------EALRTKIVCGK 236 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 + A+ S L ++ DV + E +F + A Sbjct: 237 KDAFFSRSLIELRDDVPCVFSLEDSCCIPLDVTSAARIFVREGLHALAQQYRACVQEIDT 296 Query: 301 GAKPAAKPQETSVA------------------DEAPEVTATVISY--------------- 327 A S PEV + + S Sbjct: 297 EATNDTLQMTESSVLTSGRCANECFLSQVEGRASTPEVNSVLKSELKTSAVSGAIPIENR 356 Query: 328 ------------DNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAI 375 +Y + D LK I V AFD ETD L LVG S Sbjct: 357 DLRQDVMLARSAGHYRGVTDPVELKRIIDCACANGVVAFDCETDGLHPHDTRLVGFSICF 416 Query: 376 EPGVAAYIPV--------------------------------AHDYLDAPDQISRERALE 403 + A Y+P+ D + + Sbjct: 417 QEAEAFYVPLIVPDVSLHTESTQCTCARSTNVETEKECTEQHGVSASAVQDPAYVQAVMH 476 Query: 404 LLKPLLEDEKALKVGQNLKYDRGILANYGI--ELRGIAFDTMLESYILNSVAGRHDMDSL 461 L+ L DE V N K+D ++ G+ FDTM+ +++L+ G + MD L Sbjct: 477 QLRRLWNDETLTLVMHNGKFDYHVMHRAGVFEHCACNIFDTMVAAWLLDPDRGTYGMDVL 536 Query: 462 AERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKG 521 A + + +TITFEE+ KG+ TF + E A RYAAEDAD+T +L+ + L + G Sbjct: 537 AASFFQIRTITFEEVVAKGQ---TFAHVPYECAVRYAAEDADITFRLYHYLKLRL-ETAG 592 Query: 522 PLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLS 581 L+VFE IEMPL+P+L+R+E G+ + V+ + + + + E +AG EFN+ Sbjct: 593 LLSVFETIEMPLLPILARMEEVGIFLRKDVVQQLTRSFSDLIQQYEHDIFSLAGHEFNIG 652 Query: 582 STKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYT 641 S KQLQT+LF++ + P KK G ST VL++LA +P+ + IL +R L+KL+STYT Sbjct: 653 SPKQLQTVLFQELHLPPGKKNTQG-YSTDHSVLKKLARKHPIAEKILLFRDLSKLRSTYT 711 Query: 642 DKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVI 701 + L + + +TGRVHTS+ Q TATGRLSS +PNLQNIP+++ EGR+IRQAF A + + Sbjct: 712 ESLAKLAD-QTGRVHTSFVQIGTATGRLSSRNPNLQNIPIKSTEGRKIRQAFQATVGHEL 770 Query: 702 VSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAIN 761 +SADY+QIEL ++AHLS+D+ LL AF + DIH TAA +F + ++ V RR AK IN Sbjct: 771 ISADYTQIELVVLAHLSQDRNLLNAFRQHIDIHALTAAYIFNVSIDDVQPAMRRIAKTIN 830 Query: 762 FGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGR 821 FG++YGMSAF L+ +L I +KEAQ ++ YFE YPGV + + Q ++ GYV +L GR Sbjct: 831 FGIVYGMSAFRLSDELKISQKEAQSFIYRYFETYPGVYAFSTQVAEQTRKTGYVTSLAGR 890 Query: 822 RLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVH 881 R Y+ I S N RA AER A+N +Q +AADI+K AMIA+ R ++++QVH Sbjct: 891 RRYIRTIDSRNTLERARAERMALNTQIQSSAADIVKIAMIAIQRAFARRPLRAQLLLQVH 950 Query: 882 DELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 DEL+FE + V + + ME+ L +PL + V SG +W H Sbjct: 951 DELIFEAPAAETAIVKEILFAEMEHAVELSIPLRIHVESGNSWGDFH 997 >UniRef50_A7HJZ2 DNA polymerase I n=11 Tax=Bacteria RepID=A7HJZ2_FERNB Length = 898 Score = 950 bits (2455), Expect = 0.0, Method: Composition-based stats. Identities = 357/928 (38%), Positives = 534/928 (57%), Gaps = 56/928 (6%) Query: 8 PLILVDGSSYLYRAYHAF-PPLTNSAGEPTGAMYGVLNMLRSLIMQY---KPTHAAVVFD 63 + L DG+ LYRAY A LT ++G PT A+YG+ ML + ++ + A + D Sbjct: 3 RVFLFDGTGLLYRAYFAIDQSLTTTSGVPTNALYGLSRMLVKFLKEHVIINEDYCAFMLD 62 Query: 64 -AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 G T+R EL+ YK+HRP P+ L QI +++ G+ L+ V G EADDVI TLA Sbjct: 63 VKGGSTYRKELYADYKAHRPETPEPLLKQISLADELIEGFGIKLIKVPGYEADDVIATLA 122 Query: 123 REAEKAGR-----PVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPP 173 ++ EK + + I T DKDM QLV NI + E++ KYG+ Sbjct: 123 KKFEKEKQKYNISEINIITSDKDMLQLVNENIFVWRVEKGVTDLKKYTNNEIIEKYGITS 182 Query: 174 ELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMA 233 E I D+LAL+GD SDNIPGV G+GEKTA +L G ++ K+ + + Sbjct: 183 EQIKDYLALVGDVSDNIPGVSGIGEKTAAKILNEFGSVENALKNISKLP-------EKIR 235 Query: 234 AKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEA 293 +E N E LS +L + T+VE+++ E+L + ++LL + KK+EF ++ Sbjct: 236 NAIENNIEDFELSRKLVELNTNVEIKIDIEELLYKGYDQKKLLNVLKKFEFSSVIKEL-- 293 Query: 294 GKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFA 353 ++A + + Y I +E L + + K+ A Sbjct: 294 -------------------------NLSAELTNKVEYKVIENERALSDLLETIMKSKKIA 328 Query: 354 FDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEK 413 D ET SLD +VG+S A++ G A YIP+AH I E + L+ L K Sbjct: 329 LDLETTSLDPFEGKIVGISIAVDEGKAFYIPIAHVGA---KNIPIESVKKFLRDLFNSGK 385 Query: 414 ALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITF 473 + G N+K+D ++ GIE + +FD+M+E+Y+LN + ++D L+ + L HK I++ Sbjct: 386 TVG-GHNIKFDLKFISRLGIEPQIPSFDSMIEAYLLNPNEKKFNLDELSLKLLGHKMISY 444 Query: 474 EEIAGKGKN--QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEM 531 E++ F+ I ++ A +Y+ EDAD++L++H + P + ++ ++E IE+ Sbjct: 445 EDLVKDTIPLFAGDFSYIPVDTAVKYSCEDADMSLRIHNLLHPLIYSNE-MNELYEKIEL 503 Query: 532 PLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILF 591 P++ VL+ +E NGV D + L+N S+E+ +L L + EI GE FNL+S KQL ILF Sbjct: 504 PMILVLANLELNGVYFDIQYLNNLSQEMDKKLLALSNRIFEITGEAFNLNSPKQLGYILF 563 Query: 592 EKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPK 651 EK + +K T GA ST EVLE LA +Y + K+ILEYR + KLKSTY D +P M+N Sbjct: 564 EKLKLPSVKSTSTGAYSTDVEVLEYLANEYEIAKLILEYRKIQKLKSTYVDAIPNMVNKN 623 Query: 652 TGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIE 710 T RVH S++Q TATGRLSS+DPNLQN+P R++EG+ IR A + + I+ ADYSQIE Sbjct: 624 TKRVHASFNQTGTATGRLSSSDPNLQNLPGRSDEGKEIRMAVKPQKDGWYILGADYSQIE 683 Query: 711 LRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSA 770 LR++AH++ D L+ AF E KDIH TA ++FG+ E +T RR K +NF ++YG+S Sbjct: 684 LRVLAHITEDPNLINAFKENKDIHLETAKKLFGVSEEFITENMRRIGKMVNFAIVYGVSP 743 Query: 771 FGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKS 830 +GLA++ + K+ +K ++ Y + Y V EYM + AK+ GYV T+ GR+ +P I S Sbjct: 744 YGLAKRTGLDVKDTKKMIEAYLDYYKNVQEYMANIKEFAKKNGYVRTMFGRKRDIPQINS 803 Query: 831 SNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHK 890 + RA ER AIN P+QG+AADI+K AMI + L+ E+ + MI+QVHDELVFEV + Sbjct: 804 KDQNIRAEGERIAINTPIQGSAADIMKIAMIRIYERLKDEKLQSMMILQVHDELVFEVPE 863 Query: 891 DDVDAVAKQIHQLMENCTRLDVPLLVEV 918 ++V+ V K + + MEN +L VPLLV++ Sbjct: 864 NEVEYVKKLVKEEMENAVKLRVPLLVDI 891 >UniRef50_Q7VRJ4 DNA polymerase I n=3 Tax=Enterobacteriaceae RepID=Q7VRJ4_BLOFL Length = 943 Score = 949 bits (2453), Expect = 0.0, Method: Composition-based stats. Identities = 447/935 (47%), Positives = 624/935 (66%), Gaps = 13/935 (1%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 NP+ILVDGS Y+YRAYHA+PPLT G+P +YGV++M++SLI +Y+P+H AV+FD G Sbjct: 9 NPIILVDGSFYMYRAYHAYPPLTTQNGQPVWVIYGVISMIKSLITRYQPSHMAVIFDVSG 68 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 KTFRD+LF+ YKS+R +PDDL QI P H ++KAMG+ +L + VEADDVI TLA Sbjct: 69 KTFRDDLFKQYKSNRIKIPDDLSIQIIPTHKIIKAMGISVLNIPNVEADDVIATLATFYA 128 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDS 186 + + VLISTGDKDMAQ+V+ NI LINTM+N +L P EV K+GVPP LI D+LAL+GD Sbjct: 129 QLNKTVLISTGDKDMAQIVSSNIILINTMSNIMLNPTEVEKKFGVPPTLIADYLALVGDR 188 Query: 187 SDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLS 246 +DNIPGVPG+G+KTAQ +L +G L+ LY I L+ RG K + L NKE+A+L Sbjct: 189 ADNIPGVPGIGKKTAQIVLNQIGNLNILYQNLNNILQLNIRGRKKIYQALLINKELAFLC 248 Query: 247 YQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAK--- 303 Y+LATIK DV L+ + +L +Q+ ++L+ LF +YEF W D+++GKW + Sbjct: 249 YKLATIKIDVPLQESDYKLLIQEINTQDLILLFTQYEFNTWLTDLQSGKWNNTNKYEKKI 308 Query: 304 --PAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 A + + ++ ++ I + TLK WI + + +D+ Sbjct: 309 ISTAYTKHANTKIIQNSSYNNLKLNNNSNYIIYNTATLKHWIKQNYHKNHLILNIHSDNS 368 Query: 362 DNISANLVGLSFAIEP---GVAAYIPVAHD-----YLDAPDQISRERALELLKPLLEDEK 413 + +AN++GL ++ YIP++++ + + +S + L L+P+LE+ Sbjct: 369 NIFTANILGLCLSLYNIYINQYIYIPISNNIQIPNQYNNKNYLSLKNVLLNLQPILENPA 428 Query: 414 ALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITF 473 +K+GQN+K++ +L + I L G FD +LE YIL ++ + + + F Sbjct: 429 VVKIGQNMKFNYSLLKRHNINLSGKIFDVILEFYILYGTTNYQNIKRFLNKETFNSILNF 488 Query: 474 EEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPL 533 ++ N + + + YA + LH +WP L + +F+ IE+PL Sbjct: 489 QQSYDNYNNYIVKEIKNIYQESLYAIQLILAIFDLHQILWPQLYSNDKLKKIFQEIEIPL 548 Query: 534 VPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEK 593 + +L+ IE GV ID +L ++S EL + L L+ +A+++AG FNL S KQLQ IL++K Sbjct: 549 ISILAHIESYGVLIDKTLLCSYSMELNVHLNTLQNQAYQLAGTSFNLDSIKQLQEILYKK 608 Query: 594 QGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTG 653 Q + LKKTP G+PST+EEVL++L+ YP+PK+IL+YR L+KLKSTYT+KL M+N ++ Sbjct: 609 QKLPILKKTPSGSPSTNEEVLKKLSHKYPIPKIILKYRSLSKLKSTYTNKLISMVNTESN 668 Query: 654 RVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRI 713 R+HTSY+Q TATGRLSS +PNLQNIP RN +GR+IRQAFIAP VIVSADYSQIELRI Sbjct: 669 RIHTSYNQTRTATGRLSSANPNLQNIPNRNHDGRKIRQAFIAPSHSVIVSADYSQIELRI 728 Query: 714 MAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGL 773 MAHLSRD L+ F GKDIH TA+E+F L VT+EQR AK INFGLIYGMSAFGL Sbjct: 729 MAHLSRDFKLINDFLSGKDIHTTTASEIFVTSLNLVTNEQRHQAKTINFGLIYGMSAFGL 788 Query: 774 ARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNG 833 ++QL++ EAQKY+D YF+RYPGV++Y++ + + GYV TL+GR+LYLP+I S N Sbjct: 789 SKQLSVTCYEAQKYVDRYFQRYPGVMQYIQHIKDNVYKYGYVSTLEGRKLYLPNIYSKNL 848 Query: 834 ARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDV 893 +++ AERAAINAPMQG+AADIIK+AMI+++ WL+ + V+MIMQVHDELVFEV + + Sbjct: 849 SKKKGAERAAINAPMQGSAADIIKKAMISINYWLKQDDIPVQMIMQVHDELVFEVQNNFI 908 Query: 894 DAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 D KQI +LME C LDVPL V++G G+NW+QAH Sbjct: 909 DTAIKQIKKLMEECFILDVPLKVDIGVGKNWEQAH 943 >UniRef50_B1GZ14 DNA polymerase I n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZ14_UNCTG Length = 908 Score = 948 bits (2450), Expect = 0.0, Method: Composition-based stats. Identities = 344/922 (37%), Positives = 526/922 (57%), Gaps = 21/922 (2%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 ++DG++Y++RAYHA PPL+ S A+YG + +L + +KP + AV FD Sbjct: 2 KKFFIIDGNAYIHRAYHALPPLSTSNNRQVNAVYGFVKLLLKIKNSFKPDYMAVCFDYPS 61 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 K FR E+F+ YK++R P+ L +Q+ VKA+ + + + G EADD+I T+ + Sbjct: 62 KNFRHEIFKDYKANRKPLDKALISQMPIAREAVKALNVVGIEIKGYEADDLIATVTGNNK 121 Query: 127 KAGRPVLISTGDKDMAQLV-TPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185 +G +I TGDKD+ QL + + N + + ++V KYGV P+ + D ALMGD Sbjct: 122 GSGVQTVIVTGDKDILQLAEDETVLIWNYSKDIMYDTKKVEEKYGVAPKQLSDIFALMGD 181 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 +SDNIPG+ G+GEKTA L++ G L+ + + + G M L KE A L Sbjct: 182 ASDNIPGIKGIGEKTAVKLIEKFGNLENVLQNADSVKG-------NMGKLLSHGKEQALL 234 Query: 246 SYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPA 305 S +L + V L+ + E + A + + F+KYEF + A ++ + Sbjct: 235 SRKLIELNRRVPLDYKLGEFESKDIDAGKAVSFFEKYEF----KSLLAKYSVKEHELQFP 290 Query: 306 AKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNIS 365 ET +EA + + + +E K+E+A +FA T +LD++ Sbjct: 291 VILNETHRNEEAGSGSFVT-DKPVFEVVNSQERAAEVAEKIEQAGIFALKTVRSTLDSLK 349 Query: 366 ANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDR 425 +VG+S +E A Y P+ H+ L A Q+ E ++ PL +K K+G +LK +R Sbjct: 350 TRIVGISLCVE-NKAFYFPIGHNDLTAR-QVIFEDFKDIFAPLFFSDKIKKIGHDLKQER 407 Query: 426 GILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLT 485 I + G+ L I FD ML SY LN A H + +++ +L A KG + + Sbjct: 408 NIYSMSGVGLNNIYFDIMLASYCLNP-AKSHCITDMSKEYLDFTAG-VGSYAWKGSKKSS 465 Query: 486 FNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGV 545 F ++E +YA + ++ + K K +F + EM LV +LS +E +G+ Sbjct: 466 FANSSIEAGAKYANSISAAVFAIYKIFDFQI-KEKKLSLLFFDTEMSLVEILSEMEISGI 524 Query: 546 KIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGG 605 K+D L N +E++ L +E ++IAG EFN++S KQL +++FEK + +KKT G Sbjct: 525 KVDLPFLRNFNEKIVYELKIIENNIYKIAGIEFNINSQKQLSSVMFEKLNLPVIKKTKTG 584 Query: 606 APSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTA 665 ST EEVL EL+ + P IL+YR L KLKSTY D L R+HT ++QAVT Sbjct: 585 -YSTDEEVLVELSS-HEFPAEILKYRELQKLKSTYIDPLTDYCVYYGSRIHTIFNQAVTT 642 Query: 666 TGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLT 725 TGRLSST+PNLQNIPV++ G+ R+AF+ + + +SADYSQI+LR++AH+S+D + Sbjct: 643 TGRLSSTEPNLQNIPVKSAYGKEFRKAFVPERNKIFISADYSQIDLRVLAHISQDTKFIE 702 Query: 726 AFAEGKDIHRATAAEVFGLPLE-TVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEA 784 AF G DIH ATA E+F +P +T R +AK+INFG+IYGMS FGL++QLNIP +A Sbjct: 703 AFKAGTDIHSATAREIFNIPEGYPLTDSLRSAAKSINFGIIYGMSPFGLSKQLNIPFGKA 762 Query: 785 QKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAI 844 ++Y+D YFERY V +ME+ QA E GYV T+ GR Y+P+++S+N R A ER A+ Sbjct: 763 KEYIDGYFERYDKVKFWMEQIVKQASEDGYVRTITGRIRYIPELRSTNAQVRKAGERMAL 822 Query: 845 NAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLM 904 N P+QG++ADIIK AMI+V ++ + + M++QVHD+L+FEV + + + I M Sbjct: 823 NTPVQGSSADIIKIAMISVYNEIKLKGYKSLMLLQVHDDLLFEVPDGESENMISIIKNKM 882 Query: 905 ENCTRLDVPLLVEVGSGENWDQ 926 EN L +P++V++ +G NW + Sbjct: 883 ENPLHLSIPIVVDIKAGRNWGE 904 >UniRef50_B0TER6 DNA polymerase i n=2 Tax=Heliobacteriaceae RepID=B0TER6_HELMI Length = 939 Score = 947 bits (2448), Expect = 0.0, Method: Composition-based stats. Identities = 359/957 (37%), Positives = 516/957 (53%), Gaps = 57/957 (5%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + +++DGSS L+RA++A P ++ S G T A+YG L ML L +Y+P AV D Sbjct: 1 MRNAVFMVIDGSSLLHRAFYALPLMSTSQGVHTNAVYGFLTMLERLRREYQPDFLAVCLD 60 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 T R + +E YK+ R P++LR Q L ++ A +PL G EADD+IG L Sbjct: 61 KSRITHRTQRYEAYKAQRGATPEELRPQFGLLKEVLAAWRIPLFEEEGYEADDLIGALVC 120 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDF 179 A+K G LI TGD+D QL++P + ++ T E + K G+ P ++D+ Sbjct: 121 LAKKQGIDSLIVTGDRDAWQLISPGVEVLFTRKGISELERYDEEALKAKIGLTPRQVVDW 180 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 LMGD SDNIPGVPGVGEK A LL+ G +D+LY +++ G + KL + Sbjct: 181 KGLMGDPSDNIPGVPGVGEKRAFKLLEQFGDMDSLYERLDEVKG-------KLKEKLATH 233 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 +E A+LS +LATI+ ++ LE E P L L+KK EF+ + + Sbjct: 234 REQAFLSRELATIQCNIPLEPDWEACRAASPDFPALRRLYKKLEFRSLLRHLPGDEGDDE 293 Query: 300 KGAKPAAKPQET---------------------SVADEAPEVTATVISYDNYVTILDEET 338 Q+ S A+ + D V I E Sbjct: 294 AEGGSLFARQDEQAVSAVDPMGADGTAGGGVRCSAAEGDKPGDGQAVRPDQAVRIDVEAP 353 Query: 339 LKAWIAKLEKAPVFAFDT---ETDSLDNISANLVGLSF--AIEPGVAAYIPVAHDYLDAP 393 L +E + V ++ + G I +A Sbjct: 354 LTVEYTAVEDGNAIGAMLTELMQIGAEPGCRTAVLAAWEGSPRTGKLKQIVLAAGRDALL 413 Query: 394 DQISRE---RALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILN 450 + KP + K+ + K + + GI D +L +Y+L+ Sbjct: 414 RLWVIDRPGAFFAATKPFWASKDHRKLFFDAKSLWLLARREDTVIEGIDGDGLLGAYLLD 473 Query: 451 SVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHL 510 +A R+ + A W+ K T + + + EE R AA + Sbjct: 474 PLANRYSLARSAHDWIGWKVDT----------EAGRSVLPPEEGARAAA----ALFHMTP 519 Query: 511 KMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKA 570 M L + G ++ ++E+PL P+L +E G+K++P VL + EL + L+ Sbjct: 520 VMEARLGEE-GLCALYRDVELPLAPILGAMEWTGIKVNPAVLQEMAGELGADIRRLQADI 578 Query: 571 HEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEY 630 +++AGE FN++ST+Q ILFEK G+ +K+T G ST EVLEELA +P+ +LEY Sbjct: 579 YDLAGESFNINSTQQFGKILFEKLGLPVIKRTKTG-YSTDVEVLEELADRHPIVPKVLEY 637 Query: 631 RGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIR 690 R L KLKSTY + L +I+ + GR+HTS++QAVTATGRLSST+PNLQNIPVR E+GRRIR Sbjct: 638 RQLMKLKSTYVEGLLPLIDGEDGRIHTSFNQAVTATGRLSSTEPNLQNIPVRLEQGRRIR 697 Query: 691 QAFIAP-EDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETV 749 +AF AP +D+ +++ADYSQIELRI+AHLS D AFA+ +DIH TA+EVFG+P+E V Sbjct: 698 KAFTAPGDDWTLLAADYSQIELRILAHLSGDPSFKDAFAKNQDIHTRTASEVFGVPMENV 757 Query: 750 TSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQA 809 TSE RR AKA+NFG++YG+S FGL+R L + R EA++Y+D YF+RY GV Y++ A+A Sbjct: 758 TSEMRRRAKAVNFGIVYGISDFGLSRDLGVLRAEARQYIDGYFDRYSGVKGYIDEIIAEA 817 Query: 810 KEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQA 869 + QGYV TL GRR LPD+ N R+ ERAA+N P+QGTAADIIK AM+ + L A Sbjct: 818 RRQGYVTTLLGRRRRLPDLFVKNKIRQNFGERAAMNTPIQGTAADIIKAAMVRIPGLLAA 877 Query: 870 EQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 + + RM++QVHDEL+FE K+++ A I + ME RLDVPL V+V +G NW + Sbjct: 878 KGLKTRMLLQVHDELIFEAPKEELSEAAALIRETMEQTIRLDVPLTVDVKTGPNWYE 934 >UniRef50_A0PZF5 DNA polymerase I n=27 Tax=Clostridia RepID=A0PZF5_CLONN Length = 878 Score = 947 bits (2447), Expect = 0.0, Method: Composition-based stats. Identities = 323/929 (34%), Positives = 513/929 (55%), Gaps = 57/929 (6%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + + L+++DG S +YRA+ A PPLTN G T A+YG + ML + + KP + FD Sbjct: 1 MNKERLLILDGHSLMYRAFFALPPLTNKEGIHTNAIYGFIKMLLKMKEEIKPDYIVTTFD 60 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 K TFR + +E YK+ R MPD+L Q + ++ + + + + G EADD+IGTL++ Sbjct: 61 KKAPTFRHKEYEEYKAGRAKMPDELNEQFPIVKDILNKLAINIFEIEGFEADDLIGTLSK 120 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDF 179 AE+ G V I TGD+D QL T N+ ++ I +++ +YGV P ID Sbjct: 121 FAEEKGIEVYIVTGDRDALQLATDNVRVVINKKGMSEKEIYDKNKMIEEYGVTPTEFIDV 180 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 LMGD SDNIPGVPG+G KTA L++ G ++ + E I+G K M L Sbjct: 181 KGLMGDKSDNIPGVPGIGNKTALKLIKEYGSIENVLENVENISG------KKMKQNLIDY 234 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 +E A LS +LATI DV +E+ ++++ ++ + + L ++ + + ++ + Sbjct: 235 REQAILSKKLATICKDVPIEINLDEIKSKEDYDIQGVRLL--FQSLGFKSLLDNIGDNEG 292 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 + A+ +E+ + ++ I E ++ ++ + D Sbjct: 293 LDKEDEAEVKESDINIKSTN-------------INTIENFSKFVEGIDDSIYIQADFV-- 337 Query: 360 SLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQ 419 +NI + + + + ++ A++ D + E+LK L E+EK KV Sbjct: 338 -DENIYSKIEFNNLYVRHKEEVFVISANEIKDKDG----AKYFEILKNLFENEKIKKVCH 392 Query: 420 NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 + K +L + I + IAFDT + +Y+L + + L E L + I Sbjct: 393 DSKKVYVVLKKHNIAAKNIAFDTKIAAYLLQPSKSDYMLKDLIEEMLLLSLKDDDNIK-- 450 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 + ++ K+ D++K + +E+PL+ VL+ Sbjct: 451 -------------------INETYYIKDVYEKLEKDIKKS-NMEELLYTVELPLIEVLAS 490 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 +E G ++D L E+ + LEK+ HE+A EEFN+ S KQL ILFEK + + Sbjct: 491 MECEGFRVDENRLTEIGEKFKKEIETLEKEIHELADEEFNIKSPKQLGKILFEKLDLPVI 550 Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 KKT G ST+ EVLE+L +P+ + I+EYR + KL STY + L +I+ + ++H+S+ Sbjct: 551 KKTKTG-YSTNAEVLEKLKDSHPIIEKIIEYRQITKLDSTYVEGLKNVID-EDAKIHSSF 608 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPED-YVIVSADYSQIELRIMAHLS 718 +Q VT TGRLSST+PNLQNIP+++E GR IR+ F+ D VI SADYSQIELRI++H++ Sbjct: 609 NQTVTTTGRLSSTEPNLQNIPIKHEMGREIRKVFVPNNDESVIFSADYSQIELRILSHIA 668 Query: 719 RDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLN 778 D+ L+ AF KDIH TA+EVF +P++ VT R +AKA+NFG++YG+ AF L++ +N Sbjct: 669 DDEKLIDAFKHHKDIHTITASEVFKVPIDEVTPLMRSNAKAVNFGIVYGIGAFSLSKDIN 728 Query: 779 IPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAA 838 + RKEA++Y+D YF RYP V +Y++ ++A+ G+V T+ R+ Y+P+I+S N R Sbjct: 729 VSRKEAKEYIDTYFSRYPNVKKYIDEIISKAEVDGFVTTILNRKRYIPEIQSRNKIVRGF 788 Query: 839 AERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAK 898 ER A+N P+QG+AADIIK AM+ V L+ + +I+QVHDEL+ V+KD+++ V + Sbjct: 789 GERLAMNTPIQGSAADIIKLAMVEVYNELKNRNLKSTLILQVHDELILNVYKDELEEVKE 848 Query: 899 QIHQLMENCTRLDVPLLVEVGSGENWDQA 927 + MEN +L VPL +V GE W +A Sbjct: 849 MVVDKMENVMKLLVPLEADVNVGETWYEA 877 >UniRef50_Q1D7R1 DNA polymerase I n=4 Tax=Myxococcaceae RepID=Q1D7R1_MYXXD Length = 908 Score = 946 bits (2445), Expect = 0.0, Method: Composition-based stats. Identities = 353/929 (37%), Positives = 518/929 (55%), Gaps = 28/929 (3%) Query: 2 VQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 L+L+D S +++RAYHA PPLT S G T A+ G M+ + + KPTH A+ Sbjct: 6 PSRSAPTLVLIDASGFIFRAYHAIPPLTTSKGVQTNAVLGFTRMVLKALRELKPTHVALA 65 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 FD + +T R ++ YK++R P+DL Q + +V+A+ +P+L V+G EADDVIGTL Sbjct: 66 FDKESRTERQKIDPTYKANREGPPEDLVPQFALIRRVVEAINVPVLEVAGWEADDVIGTL 125 Query: 122 AREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLA 181 A +A++ G V + TGDKD Q+V ++ L + M + P +V + G+ P + D+LA Sbjct: 126 AVKAKQEGFCVQVVTGDKDFVQIVDDDVRLYDPMKDVHTLPADVKARLGIEPGQMRDYLA 185 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 L+GD+ DN+P VPG+G KTA L+Q G ++TL + +++ + + ++E Sbjct: 186 LIGDAVDNVPKVPGIGPKTATELIQQFGDVETLLSRLDEVK------KPKIRENIASHRE 239 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 + L T KTD+ L++ L + A+ LF + EF ++ + Sbjct: 240 SLLRAKVLVTFKTDLSLDVRMADLARRPVDAQRSRELFTELEFFALLKELPQQDGVAGAP 299 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 + KP +V + + L + +A + Sbjct: 300 DEVKEKPAPLAVTP---------------RLVGADAELAQLAGAVREAGAVTLIPAYEG- 343 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 A LVGL A+ G AY+P+ H L Q+ E + +LED K G +L Sbjct: 344 SPFGAKLVGLGVALPDGQTAYVPLRHAQLGV-TQVRPEAFTAAFREVLEDAAVKKGGHDL 402 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIA--GK 479 K +LAN GI L G D L SY+LN H + L+ L + A + Sbjct: 403 KALSLVLANDGITLHGAHDDVELLSYLLNPSRREHALVDLSRERLNTELPPLPPAAEGKR 462 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 GK +EE A A+ +L ++W + + + ++E+PL+P+L++ Sbjct: 463 GKKDRALADHTVEEVATGFAIRAEAARRLAPELWKE-LEAAKLAALARDMELPLLPLLAQ 521 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 +ER GV +D L S ++ + K+ + AG EFN+ S QL +LF + + + Sbjct: 522 MERRGVLLDTAELSRTSVKVDAAVEAQVKEVYRHAGREFNIGSNPQLVEVLFTELKLPII 581 Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 K+ G PS +EVLE+L+ ++PLP I+EYR L+KLKSTY D LP ++ GR+HT+Y Sbjct: 582 KRGKTG-PSADQEVLEKLSEEHPLPGAIIEYRSLSKLKSTYLDTLPTLV-AADGRIHTTY 639 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSR 719 HQA TATGRLSSTDPNLQNIPVR + GR IR+AF+A E + +VSADYSQ+ELR++AH++ Sbjct: 640 HQAATATGRLSSTDPNLQNIPVRTDLGREIRRAFVAAEGHQLVSADYSQVELRLLAHIAN 699 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 D L+ AF +DIH TAAEVFG+ E V EQRR AK +NFG+ YG+S GL +L I Sbjct: 700 DPVLIEAFLHDEDIHTRTAAEVFGVAKEQVDREQRRVAKMVNFGIAYGLSPHGLGARLGI 759 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 + A+ ++ YF RY G+ Y+E T +A++ GYVETL GRR Y+ D+ S N AA Sbjct: 760 AQDVARDIIERYFTRYAGIRRYLEETVDRARKTGYVETLYGRRRYMADLNSKNRGVAQAA 819 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 ERAAIN P+QGTAAD+IK+AM+AVD L A++ R RM++QVHDEL+FE +V+ V Sbjct: 820 ERAAINMPIQGTAADLIKKAMLAVDEALTAQKLRTRMLLQVHDELLFEAPDAEVEQVKAL 879 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWDQAH 928 + M + L VPL VEVG+G +W AH Sbjct: 880 AVKAMSSVADLKVPLKVEVGAGRSWADAH 908 >UniRef50_B8I3Y7 DNA polymerase I n=6 Tax=Clostridium RepID=B8I3Y7_CLOCE Length = 896 Score = 945 bits (2442), Expect = 0.0, Method: Composition-based stats. Identities = 342/934 (36%), Positives = 520/934 (55%), Gaps = 50/934 (5%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPP---LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 ++ +++VDG+S L RA++ LT S G T A++G +N+L + P + V Sbjct: 2 NSEDKILVVDGNSILNRAFYGLSRAAMLTTSEGLYTNAVFGFINILSKHLQDENPKYVCV 61 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 FD K TFR + ++ YK+ R MP++L Q+ + ++ AM + + V G EADD++GT Sbjct: 62 AFDLKAPTFRHKEYDQYKAQRKGMPNELAVQVPIIKQVLDAMNIARVEVEGFEADDILGT 121 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN------TILGPEEVVNKYGVPPE 174 ++ AEK G ++ TGD+D QL + + +T E+V+ KYGV P Sbjct: 122 VSSYAEKQGMKTILLTGDRDSLQLASNYTRIKLPVTRANKTETDEYDYEKVIEKYGVTPG 181 Query: 175 LIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAA 234 +ID LMGD+SDNIPGVPG+GEKTA AL++ L+ LY +K+ K + Sbjct: 182 QLIDVKGLMGDTSDNIPGVPGIGEKTALALIKKFNSLEELYENIDKVD------KKGVRE 235 Query: 235 KLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAG 294 KLE NKE+A++ +LATI V + E+L +FK+ EFK Sbjct: 236 KLENNKELAFMCKRLATIYRKVPGVENLNDFARLEIDKEKLYSIFKRLEFKTLIEKFGL- 294 Query: 295 KWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAF 354 + P V AT +V + L+++I+ ++ + + + Sbjct: 295 --------------------ENTPFVEATEALKIEHVDVDSISELQSYISVIKLSGMVSV 334 Query: 355 DTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKA 414 D + +L + E A I ++++ E + L+ + E + Sbjct: 335 YYHVDPAGSYLDDLCIFACNEEYAPANII--------FSEKLTCETVVNELREIFESKDI 386 Query: 415 LKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFE 474 K G +LK L ++GIEL + FDT + +YIL + + L+E LK E Sbjct: 387 EKYGHDLKNLYKYLKSHGIELENVIFDTFIAAYILEPTRSTYTISELSEDKLKQSITPVE 446 Query: 475 EIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLV 534 + K +L Q + A + L K+ P + + G ++ IE+PLV Sbjct: 447 ILYDKHGKRLEQGQDVS--SSEVCAAAVNAIYGLTQKLRP-IIRDNGQDELYYKIELPLV 503 Query: 535 PVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQ 594 VL+ +E G K+D + L +S+EL RL LE + + AGE FN++S KQL ILFEK Sbjct: 504 EVLANMELRGFKVDVENLKAYSKELDSRLVILENEIYMQAGETFNINSPKQLGVILFEKL 563 Query: 595 GIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGR 654 G+ KKT G STS EVLE+L+ + + + ILEYR L KLKSTY D L + + G+ Sbjct: 564 GLPVGKKTKTG-YSTSAEVLEQLSYKHEIVERILEYRQLMKLKSTYADGLL-SVLEQDGK 621 Query: 655 VHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIELRI 713 +H++++Q VTATGR+SST+PNLQNIPV+ E GR+IR+ FI DYV++ ADYSQIELR+ Sbjct: 622 IHSNFNQTVTATGRISSTEPNLQNIPVKLEMGRKIRKVFIPTNSDYVLLDADYSQIELRV 681 Query: 714 MAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGL 773 +AH++ D ++ AF +DIH TA++VFG+P E V+S R AKA+NFG++YG+ F L Sbjct: 682 LAHITGDPNMIEAFINNEDIHTTTASKVFGIPPEEVSSLMRSRAKAVNFGIVYGIGDFSL 741 Query: 774 ARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNG 833 ++ + + +KEA+KY+D Y ++Y V EYM T + KE G+V TL RR YLP++KSSN Sbjct: 742 SKDIGVTKKEARKYIDDYLDKYSKVKEYMSDTVEKGKEFGFVTTLYNRRRYLPELKSSNF 801 Query: 834 ARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDV 893 R+ ER A+N P+QG+AADIIK +M+ V L+ + + ++I+QVHDEL+ E K ++ Sbjct: 802 NMRSFGERVAMNTPIQGSAADIIKISMVKVYTELKKRKLKSKLILQVHDELIVETEKSEL 861 Query: 894 DAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 + V+K + MEN +L VPL V+V G++W Sbjct: 862 EEVSKLLKDCMENAVQLKVPLTVDVKHGDSWYDT 895 >UniRef50_C7HT94 DNA polymerase I n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HT94_9FIRM Length = 893 Score = 945 bits (2442), Expect = 0.0, Method: Composition-based stats. Identities = 327/924 (35%), Positives = 516/924 (55%), Gaps = 53/924 (5%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 ++L+DGSS ++RA+ A P LTN+ G T +YG L M + +YKP + V FD K Sbjct: 17 KKVMLIDGSSLIFRAFFALPNLTNADGVMTNGVYGFLTMYFRAVEEYKPDYILVAFDKKT 76 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 KTFR + FE YK++R P++L Q L ++ ++ + L + G EADD++GT + A+ Sbjct: 77 KTFRHKEFEDYKANRDKAPNELNYQFGILKDILDSLNVKYLDIDGYEADDIVGTFSTIAK 136 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLAL 182 + G +I TGDKD QLV + + T + + + + YG+ P+ +ID L Sbjct: 137 EEGLETVIITGDKDYFQLVNDKVVVFLTRKGISQMEEITVKSIEDDYGLSPKQLIDVKGL 196 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 MGD SDNIPGV G+GEKTA ++ G ++ LY + I G K LE +K++ Sbjct: 197 MGDKSDNIPGVDGIGEKTAIKFIKKYGSMEGLYENLDDIKG------KKTKENLENSKQI 250 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A+LS ++ TI T+ + + +L+V++P + L F KY F ++ Sbjct: 251 AFLSKKIGTIVTNAPVGMKISELKVKEPDLDSLREKFSKYNFNKFMEKF----------- 299 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 E + + E+ + D++ I D E K VF F + + + Sbjct: 300 -------EDTSEERKDEIEFSYSFSDDFSIIDDIE----------KDGVFYFKSIFEEDN 342 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 I +N ++ E+ +E K E + KV ++K Sbjct: 343 YIHSNAYKIAIKTSSSKTYIYN------------PDEKFVEKFKKYFEADNIKKVSFDIK 390 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 D + GI + DTML Y+++ +D+ + ++ +LK++ E++ GKGK+ Sbjct: 391 EDIVLFDKLGINISLPYDDTMLMHYLIDPSRSSYDLKTFSQAFLKYEVENEEDLLGKGKS 450 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 + ++ + + G+Y A + + L + +++++ E+ L VL+ +E Sbjct: 451 KKSYKDLDSDNLGKYLASIVNAIEDSLDILTQKL-EELSMYDLYKDCEIKLSKVLADMEI 509 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 G D L +E++L L +LEK +E+AG EFN++S KQL ILFE + +KKT Sbjct: 510 TGFICDKNELEKIKDEVSLELGDLEKIIYELAGSEFNINSPKQLSKILFEDLKLPIIKKT 569 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST+ +VLE+L +P+ + I YR + KLKSTY + L I+ + GR+ +++ Q Sbjct: 570 KTG-YSTNAQVLEKLRKKHPIIEKIERYREMYKLKSTYLESLEECID-EDGRIRSTFKQN 627 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKG 722 VTATGRLSST+PNLQN+P+R EEGR+IR+AF A + V++ ADYSQIELR++AHL+ DK Sbjct: 628 VTATGRLSSTEPNLQNLPIRTEEGRKIRKAFKADDGKVLIDADYSQIELRVLAHLANDKK 687 Query: 723 LLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRK 782 + AF++ DIH TA+EVF P++ VT QR AKA+NFG+IYG+S +GL++ LNIPRK Sbjct: 688 MQEAFSKDIDIHTKTASEVFSTPIDEVTKLQRSEAKAVNFGIIYGISDYGLSQNLNIPRK 747 Query: 783 EAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERA 842 A++Y++ Y + YP + +YM+ +AKE GYV T+ RR Y+P+I S N R+ ER Sbjct: 748 RAKEYIENYLDTYPEIKKYMKDIVKKAKEDGYVNTIFNRRRYVPEINSKNFNVRSFGERV 807 Query: 843 AINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQ 902 A+N P+QGTAADIIK AMI LQ + ++++Q+HDE++ E K D++ + + Sbjct: 808 ALNTPIQGTAADIIKFAMINSYQNLQKAKIDAKIVLQIHDEIIIEASKKDLEKAKEILKS 867 Query: 903 LMENCTRLDVPLLVEVGSGENWDQ 926 M++ L VPLLV++ SGE+ + Sbjct: 868 SMQDAVDLKVPLLVDIDSGESMYE 891 >UniRef50_D2RIE4 DNA polymerase I n=5 Tax=Clostridiales RepID=D2RIE4_ACIFE Length = 872 Score = 943 bits (2438), Expect = 0.0, Method: Composition-based stats. Identities = 349/926 (37%), Positives = 502/926 (54%), Gaps = 64/926 (6%) Query: 8 PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 +L+DGSS ++RA+ A PPLTN G TGA+YG+ NM+ L+ + +P++ V FD K Sbjct: 4 KFLLIDGSSLIHRAFFALPPLTNKNGVNTGAVYGLCNMILKLLQEIQPSYMLVAFDKSRK 63 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 TFR E F YK R P +L+ Q ++++MG+P L V EADD+IGTL+ A Sbjct: 64 TFRTEKFPEYKGQRKATPPELKEQFPLSIQLLQSMGIPTLEVDNYEADDIIGTLSSGAP- 122 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKY-GVPPELIIDFLAL 182 V I TGD+D QL+ N+ ++ T + + +Y G+ P IID L Sbjct: 123 ENVQVRIVTGDRDEFQLIKGNVQVLFTKKGISNIAVYDEKAFGEEYQGLQPRQIIDLKGL 182 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 MGD+SDNIPGVPGVG KTA L+ ++ + E++ G K + KL N+E Sbjct: 183 MGDTSDNIPGVPGVGPKTALKLITEYRTVENVLDHAEEVKG------KALKEKLRNNREQ 236 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A LS LATI V ++ + EE L ++ +FK A Sbjct: 237 ALLSKDLATICLQVPIDRDPGAYVLTGL-TEESRQLMQELQFKNLWDRFVPVLGCAAGTD 295 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 ++ P V A + + E L I K A+ + SL Sbjct: 296 AGSSDPLSL----FGQPVAAETLDTVEITSDAQGEALVEEIRARGKQVALAWQLKG-SLP 350 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 + + L+FA Y+ P+ +E L LL+D K + K Sbjct: 351 VLEMERLDLAFA-----------GKHYVFCPETAGKEAVLS----LLQDPAISKAAADPK 395 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 + G L+GI D L Y+ A + + +L E +L Sbjct: 396 ELYKYMMGQGKNLQGITDDPALAGYLYEPGASGYGIQALGEEFLP--------------- 440 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 + E A T L + L + +G ++E+IE+PL L+ +E Sbjct: 441 -------------AASGEGAQDTAALVPVLREKL-EERGLTRLYEDIELPLTENLAEMEF 486 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 G+ +D +L + E+T ++ LE++A + AGE+FNL+S KQL +LFEK G+ +KKT Sbjct: 487 TGIAVDQAMLDEVTGEMTKKVQALEQQAWDQAGEQFNLNSPKQLGVLLFEKLGLPIIKKT 546 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST VLE L ++PL + ++ YR L+KL STY L +INP TGR+HT ++Q Sbjct: 547 KTG-YSTDVSVLEALQGEHPLIETLISYRQLSKLLSTYLLGLHPLINPATGRIHTHFNQM 605 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY-VIVSADYSQIELRIMAHLSRDK 721 T TGRLSST+PNLQNIP R E G+R+R+ F+ E Y +++S DYSQ+ELR+MA +++D+ Sbjct: 606 ATVTGRLSSTEPNLQNIPTRTEVGKRMREMFVPGEGYDLLMSCDYSQVELRVMASIAQDE 665 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 LL +F G+D+H TA+E+FG+PL+ VT R AK +NFG+IYG+S FGLARQL +PR Sbjct: 666 LLLDSFRHGQDVHARTASEIFGVPLDQVTPYMRSKAKTVNFGIIYGISDFGLARQLGVPR 725 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 EA +Y++ YF RY GV YMER + +A+E GYVETL GRR YLPDI + N RR+ AER Sbjct: 726 GEAAQYIESYFARYTGVKAYMEREKQKAREMGYVETLFGRRRYLPDINAKNFNRRSFAER 785 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 AIN P+QGTAADIIK AM+ V L+ + + R+++QVHDELV E+ + + V K + Sbjct: 786 TAINTPIQGTAADIIKVAMLKVARNLKEARVKSRVLLQVHDELVLEIPAAEQETVGKIVK 845 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQA 927 + ME+ L VPL+ +V G+NW +A Sbjct: 846 ETMEHAVDLAVPLVADVAVGKNWARA 871 >UniRef50_A9BEU8 DNA polymerase I n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEU8_PETMO Length = 896 Score = 943 bits (2437), Expect = 0.0, Method: Composition-based stats. Identities = 357/926 (38%), Positives = 518/926 (55%), Gaps = 45/926 (4%) Query: 9 LILVDGSSYLYRAYHAFPP-LTNSAGEPTGAMYGVLNMLRSLIMQY---KPTHAAVVFDA 64 L L+DGS YRA+ A ++ S G PT A+YGV ML L+ +Y V D Sbjct: 4 LYLIDGSGIAYRAFFALGDWMSTSDGLPTNAIYGVARMLLKLLKEYVKKGEDSIIFVMDK 63 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 K T+R EL E YK+ RP P+ QI ++ MV+ +G+ L+A+ EADDVI T+ + Sbjct: 64 KTTTYRHELLESYKAQRPETPEKYIQQIPYIYEMVEKLGIKLVAMDNYEADDVIATIVSK 123 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI----LGPEEVVNKYGVPPELIIDFL 180 ++ V I T DKDM QLV N+ ++ ++V K GVPPE I D L Sbjct: 124 KKRNYDNVYIITSDKDMMQLVKDNVYILRPEQGITEMVKYDAQQVEKKMGVPPEKIADLL 183 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 ALMGDSSDNIPGV G+G KTAQ LLQ +D LY ++I G + KL+ K Sbjct: 184 ALMGDSSDNIPGVKGIGIKTAQKLLQDYDNIDDLYQHLDEIKGST-------KNKLKNEK 236 Query: 241 EVAYLSYQLATIKTDVELELTCEQL-EVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 E AYLS +L + D +E E + Q L KK +F +++ Sbjct: 237 ETAYLSKKLVQLMVDAPIEEIFEDKEIIYQGFRNNLRDFLKKLDFNSILKELDMPDTTTN 296 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 A E + + + K + LEK + +FD ET Sbjct: 297 STKVAAETKAEKKDYSTKGKYYE-----------YNAQDYKELLKILEKYEIISFDLETS 345 Query: 360 SLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQ 419 SLD A++VG++ + +P ++ + + R + + LL ++K +GQ Sbjct: 346 SLDPYQADIVGIALSCKPFEGYFLYLYKEK-------DRWEITKEIVDLLNNKKV--IGQ 396 Query: 420 NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 NLKYD +L GIEL + FD+M+ +Y+LN + R +MD LA+ +L +KTI ++E+ GK Sbjct: 397 NLKYDITVLKVNGIELSKVHFDSMIAAYLLNPDSRRFNMDDLAKEYLDYKTIKYKEVMGK 456 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 LT I + YA EDAD+ +L + P + +FE IEM + VLS Sbjct: 457 DIKLLTLGDIDKKRVVEYAGEDADIAYRLFEVLKPK-LEEFELFELFEKIEMSTINVLSE 515 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 +E NGV D K L EE +L+ L + +I G +FN +S KQ+ +LFE G+K Sbjct: 516 MEMNGVYFDLKELQKLEEEYNKKLSSLMYEMKKIVGYDFNPNSPKQVGELLFENLGLKGK 575 Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 +KT G+ ST + LE L ++P+ + +LEYR KL STY +P ++N KTGRVHTS+ Sbjct: 576 RKTKSGSYSTDADSLEALRDEHPIIEKLLEYRKYQKLLSTYIIAIPKLVNKKTGRVHTSF 635 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIELRIMAHLS 718 +Q TATGRLSS++PNLQN+P+R E+G RIR A +DYV++SADYSQIELR++AHL+ Sbjct: 636 NQTGTATGRLSSSEPNLQNLPIREEDGERIRSTVKAQKDDYVLLSADYSQIELRVLAHLT 695 Query: 719 RDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLN 778 D+ L+ AF G+DIH TAA +FG+ ++ V RR K +NF L+YG S +GLA L Sbjct: 696 NDETLINAFNNGEDIHALTAAAIFGVKIDDVDYNMRRVGKVVNFSLVYGSSPYGLAENLK 755 Query: 779 IPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAA 838 IP ++A+ +M+ YF+ Y V EY E + A ++GYVET+ GR+ +L +IK+ ++ Sbjct: 756 IPVEDAKDFMNRYFKTYQKVKEYQESSLKIATQKGYVETIFGRKRFLKNIKTG----KSE 811 Query: 839 AERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAK 898 +R IN P+QG+AADI+K AMI + L E ++I+QVHDE+V E+ + V+ K Sbjct: 812 LKRIVINTPIQGSAADIMKLAMINLYKKLPKE---AKLILQVHDEVVIELPEKIVEETKK 868 Query: 899 QIHQLMENCTRLDVPLLVEVGSGENW 924 + MEN +L++PL V++ G+NW Sbjct: 869 MVQDCMENAVKLNIPLKVDISVGKNW 894 >UniRef50_A6NVK8 DNA polymerase I n=2 Tax=Bacteria RepID=A6NVK8_9BACE Length = 889 Score = 942 bits (2435), Expect = 0.0, Method: Composition-based stats. Identities = 340/926 (36%), Positives = 508/926 (54%), Gaps = 46/926 (4%) Query: 8 PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 L+++DG+S + RA++ LT G+PT A+YG L +L+ L+ + KP FD K Sbjct: 2 KLMVIDGNSIVNRAFYGVHMLTTRDGQPTNAVYGFLTILQKLVDEEKPDALCCTFDRKAP 61 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 TFR +E YK+ R MPD+L +Q+ L ++ AM +P + G EADD+IGT++ + Sbjct: 62 TFRHLAYEGYKAQRKGMPDELASQMPILKEVLDAMNIPRYEMDGWEADDLIGTISVKDAA 121 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTN------TILGPEEVVNKYGVPPELIIDFLA 181 AG ++ TGDKD QLVT + T + P+ YG P IID A Sbjct: 122 AGWDTVVVTGDKDSLQLVTDRTRVKLVSTRMGQTTTKEMTPDTFRETYGFDPIHIIDLKA 181 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGD+SDNIPGV GVGEKTA L+Q ++ +YA+ +K+ + KL + +E Sbjct: 182 LMGDASDNIPGVKGVGEKTAMDLIQRYQSVEAIYADLDKVEA-----KPAVLKKLTEGRE 236 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 A +SY LATI+TD L+ E ++ EL LF K EF + + L+A Sbjct: 237 QAMMSYDLATIRTDAPLDFKPEDAARKEVNQAELYQLFLKLEF----SKLIDKMGLKAPQ 292 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 + AA +E +V + D + +A D L Sbjct: 293 GEAAAVTEEQAVTGTCESEE-----------VTDLTRAEELLAIWRGQESV------DVL 335 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 N V + + + + D L+ + + + L K ++ Sbjct: 336 ALPDLNAVAVEWWESESRSRAAVLRADKLEGYNGVLKA---------LFAADIKKNTHDV 386 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 K L G+E G FDT + +Y+L G ++++ L + + ++ Sbjct: 387 KTLLSRLLEEGVEGDGFVFDTAIAAYLLAPTDGSYELEKLGITYFNQEFAKAKDTY-LAP 445 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 + + G + A + L + P L + G ++ +IE+PL VLS +E Sbjct: 446 DAFSPLADQTAVLGGMLSHCA-LIGALKKVLAPRL-EELGMHQLYYDIELPLCQVLSAME 503 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 G+ +D K L + L R+A + + +E+AGE FN++ST+QL ILF+K G+ P+KK Sbjct: 504 HAGMLVDRKALSEFGDMLDERIAADQAEIYELAGETFNINSTQQLGKILFDKLGLPPVKK 563 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 T G ST+ EVLE+L +P+ ILEYR KLKSTY D L +I P GR+HTS+ Sbjct: 564 TKTG-YSTNAEVLEKLRGQHPIIDKILEYRQYTKLKSTYVDGLGKVIAP-DGRIHTSFQN 621 Query: 662 AVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDK 721 VTATGRLSST+PNLQNIPVR E G +R+ F+AP V+V ADYSQIELR++AH++ D+ Sbjct: 622 TVTATGRLSSTEPNLQNIPVRTELGAELRKMFVAPAGKVLVDADYSQIELRLLAHIAGDE 681 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 ++ AF G+DIH TAA+VFG+P++ VT R SAKA+NFG++YG+SAF L++ + +P Sbjct: 682 HMIEAFRTGEDIHTVTAAQVFGVPVDQVTKHMRSSAKAVNFGIVYGISAFSLSQDIGVPT 741 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 EA++Y++ YF R+ GV YM +AK GYV TL GRR +LP++KSSN R+ ER Sbjct: 742 YEAKEYIEKYFARFSGVHAYMTDVVNRAKTDGYVSTLFGRRRWLPELKSSNFNTRSFGER 801 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 A+N P+QGTAADI+K AM+ V + L+ E + R+I+QVHDEL+ E +++ + V + Sbjct: 802 VALNMPIQGTAADIMKLAMLHVHSRLREEGLQARLILQVHDELIVECPEEEAETVKALLS 861 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQA 927 + ME+ +L VPL+ + +G +W +A Sbjct: 862 REMESVAQLAVPLIADAAAGRSWAEA 887 >UniRef50_UPI0001C17162 DNA polymerase A n=2 Tax=Nostocaceae RepID=UPI0001C17162 Length = 988 Score = 939 bits (2427), Expect = 0.0, Method: Composition-based stats. Identities = 347/994 (34%), Positives = 511/994 (51%), Gaps = 80/994 (8%) Query: 2 VQIPQNPLILVDGSSYLYRAYHAFPP-----LTNSAGEPTGAMYGVLNMLRSLIMQYKPT 56 V +ILVDG S +R+Y AF L +G PT +G + L +I++ +P Sbjct: 6 VDQSYPTIILVDGHSLAFRSYFAFAKSRAGGLRTKSGIPTNVCFGFMQCLLDVIVKEQPQ 65 Query: 57 HAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADD 116 AV FD TFR E +YK++R P+D + L+ +++A+ + ++ G EADD Sbjct: 66 AIAVAFDLAAPTFRHEADSNYKANRADTPEDFIPDLVNLYDLLEALNIQVITQPGYEADD 125 Query: 117 VIGTLAREAEKAGRPVLISTGDKDMAQLVTPN--ITLINTMTN---------TILGPEEV 165 ++GTLA + +G V I +GD+D+ QL+ N I+++N +V Sbjct: 126 ILGTLAETSVCSGYRVKILSGDRDLFQLIDENKGISVLNFTPEALKSSSNGIKEFHTLDV 185 Query: 166 VNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLS 225 K GV P ++DF AL GD+SDNIPGV G+GEKTA LL L +YA KI G + Sbjct: 186 KEKLGVLPTQVVDFKALCGDTSDNIPGVKGIGEKTAVKLLNIYKSLTEIYANINKITGAN 245 Query: 226 FRGAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFK 285 KL +E A+ S LA I TDV + + + ++ +++ + +K EFK Sbjct: 246 -------QQKLIAGQESAFHSQYLAKIVTDVPITIKIQDCHLKGFDTAKIIPILEKLEFK 298 Query: 286 RWTADVEAGKWLQAKGAKPAAK--------------------PQETSVADEAPEVTATVI 325 ++ ++ + + +V + + Sbjct: 299 KFLDKIQEIEKKFIHSQSTSLTGETNNSNTNNLSLDDDLWFFSAADTVNAQKSQTLKQGS 358 Query: 326 SYDNYVTILDEETLKAWIAKLEKAPV----FAFDTETDSLDNISANLVGLSFAIEPGV-- 379 S I E+ L+ + LE+ A+DTET LD +ANLVG+ G Sbjct: 359 SEIKVRIIDTEDKLRELVNILEQHKDPENPVAWDTETTDLDPRNANLVGIGCCWGTGEND 418 Query: 380 AAYIPVAHD-YLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGI 438 AYIP+ H+ + + L L+ +L K QN K+DR I GI L G+ Sbjct: 419 VAYIPLGHNITSNLEKNLPLNTVLSTLEKILVSGDYPKTFQNAKFDRLIFKYQGITLDGV 478 Query: 439 AFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIA---GKGKNQLTFNQIALEEAG 495 FD ML SY+LN H++ LA R+L + +++I GK + Q T I++ Sbjct: 479 VFDPMLASYVLNPDRT-HNLTDLALRYLGLQLTEYDDIVQKSGKKERQKTIADISIHTVA 537 Query: 496 RYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNH 555 Y + T QL K+ +L + + ++E PL VL+ +E GV I+ L Sbjct: 538 NYCGKQVYATWQLVGKLREELNEIPALFKLLVDVEQPLEVVLAEMEHRGVIINSAYLQQL 597 Query: 556 SEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGA-PSTSEEVL 614 S+ + LA LE KA +IAGE+FNL S KQL ILFEK G+ ST L Sbjct: 598 SQHIESDLATLEIKATKIAGEKFNLGSPKQLSYILFEKLGLSTKYSRKISTGYSTDAATL 657 Query: 615 EELALDYP--LPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSST 672 E+L I+EYR LAKLKSTY D LP ++N KT R+HT+++Q TATGRLSS+ Sbjct: 658 EKLQEVDQTGFVDAIIEYRTLAKLKSTYVDALPELVNHKTQRIHTNFNQTATATGRLSSS 717 Query: 673 DPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKD 732 +PNLQNIP+R R+IR+AF+ +++V+ADYSQIELRI+AHLS++ L+ A++ +D Sbjct: 718 NPNLQNIPIRTAFSRQIRKAFLPESGWLMVAADYSQIELRILAHLSQEPMLIQAYSNNQD 777 Query: 733 IHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYF 792 IH TA +F E VTSE+RR AK INFG+IYGM +R + + A +++ + Sbjct: 778 IHTLTAKLLF--DKEDVTSEERRFAKTINFGVIYGMGVLKFSRSTGVDKNIANEFIQKFN 835 Query: 793 ERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA------------- 839 +RYP V Y+E + QA QGYVET+ GRR Y + + Sbjct: 836 QRYPLVFTYLETIKKQAISQGYVETILGRRRYFDFTNKTLQQLKGKDLQEIELNKLKNLG 895 Query: 840 ------ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDV 893 R+A NAP+QG++ADIIK AM+ + L+ + ++++QVHDELVFEV + Sbjct: 896 PYDAGLLRSAANAPIQGSSADIIKIAMVRLHEVLRRY--QAKLLLQVHDELVFEVPPSEW 953 Query: 894 DAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 D + QI +MEN +L VPL+V++ GENW + Sbjct: 954 DELQLQIKSVMENAMKLSVPLVVDIHVGENWMET 987 >UniRef50_B9YEU0 DNA polymerase I n=2 Tax=Cyanobacteria RepID=B9YEU0_ANAAZ Length = 982 Score = 938 bits (2425), Expect = 0.0, Method: Composition-based stats. Identities = 360/981 (36%), Positives = 517/981 (52%), Gaps = 72/981 (7%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPP-----LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHA 58 ILVDG S +R+Y AF L AG PT +G + L +I KP Sbjct: 16 SNNPTFILVDGHSLAFRSYFAFAKGKNGGLRTKAGIPTSVCFGFIKCLLEVITTQKPQAI 75 Query: 59 AVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVI 118 AV FD TFR E + YK+ R P+D +E L+ +++ + LP+ G EADDV+ Sbjct: 76 AVAFDLGLPTFRHEADDTYKADRLETPEDFIPDLENLNELLRGLNLPIFTAPGYEADDVL 135 Query: 119 GTLAREAEKAGRPVLISTGDKDMAQLVT--PNITLINTMTN---------TILGPEEVVN 167 GTL+++A AG V I +GD+D+ QL+ IT++N T E+V Sbjct: 136 GTLSQKASAAGYRVKILSGDRDLFQLIDGDKGITVLNFSPEALKRYANSITEFQAEQVKE 195 Query: 168 KYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFR 227 K GV P I+DF AL GD SDNIPGV G+GEKTA LL LD +YA+ ++I G + Sbjct: 196 KLGVLPTQIVDFKALCGDKSDNIPGVRGIGEKTAVKLLNTYNSLDGIYAKLDEITGST-- 253 Query: 228 GAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRW 287 KL KE A S LA I DV LE+ E ++ +L+ + +K EF ++ Sbjct: 254 -----QEKLIAGKEDASHSRYLAQIVVDVPLEVNLEDCQLTGFDTNQLIPILEKLEFNKF 308 Query: 288 TADVE------AGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDN----YVTILDEE 337 + G+ L+ K + ++ + + E TA + I E+ Sbjct: 309 LDQINELQQKLGGQVLETKAEEINTTQEDDDLWFFSGEDTANTEKRPDSSIQIRIINTED 368 Query: 338 TLKAWIAKLEKA----PVFAFDTETDSLDNISANLVGLSFAIEPG--VAAYIPVAHDYLD 391 L+ +A L+K A+DTET +L+ A LVG+ G AAYIPV H Sbjct: 369 KLQELVAILQKCTNLEKPVAWDTETTALEPRDAALVGIGCCWGTGSDEAAYIPVGHKI-- 426 Query: 392 APDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNS 451 + + + L+P+LE+ K QN K+DR I GI L G+ FDTML SY++N Sbjct: 427 -GHNLQLDLVVSALRPILENANYPKTFQNAKFDRLIFKCQGINLVGVVFDTMLASYLINP 485 Query: 452 VAGRHDMDSLAERWLKHKTITFEEIA---GKGKNQLTFNQIALEEAGRYAAEDADVTLQL 508 H++ L+ R L + + +I GK + Q I ++ Y T QL Sbjct: 486 D-TTHNLSDLSLRNLGLQLTEYNDIVTKTGKKELQKNIADIGIDIVAYYCGTQVYATFQL 544 Query: 509 HLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEK 568 K+ +L K + +E PL VL+ +E GV+I+ L S++L LA+LE Sbjct: 545 VDKLRCELNKTPDLAKLLVEVEQPLEAVLAEMEYTGVRINSSYLQELSQQLESELAKLEI 604 Query: 569 KAHEIAGEEFNLSSTKQLQTILFEKQG-IKPLKKTPGGAPSTSEEVLEELALDYP--LPK 625 +A EIA E+FNL S KQL ILF+K G + ST LE+L Sbjct: 605 QATEIASEKFNLDSPKQLSYILFDKLGLSTKYSRKIQTGYSTDAATLEKLQEVDNTGFVD 664 Query: 626 VILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEE 685 I+EYR +KLKSTY D LP +++P++ R+HT ++Q T+TGRLSS++PNLQNIP+R Sbjct: 665 AIIEYRTSSKLKSTYVDALPALVHPQSQRLHTDFNQTATSTGRLSSSNPNLQNIPIRTAF 724 Query: 686 GRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLP 745 R+IR+AF+ +++V+ADYSQIELRI+AHLS++ L+ A+ + +DIH TA VF Sbjct: 725 SRQIRKAFLPESGWLMVAADYSQIELRILAHLSQEPVLVQAYKQNEDIHTVTAKLVFEK- 783 Query: 746 LETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERT 805 + VTSE+RR AK INFG+IYGM + AR + + A +++ + ERYP V Y+E+ Sbjct: 784 -DEVTSEERRFAKTINFGVIYGMGSLKFARSTGVDKANANEFIRRFNERYPQVFAYLEKV 842 Query: 806 RAQAKEQGYVETLDGRRLYLPDIKSSNGARR-------------------AAAERAAINA 846 + +A QGYVET+ GRR Y S + A R+A NA Sbjct: 843 KKEAISQGYVETILGRRRYFDFTSKSLKELKGISLEDIDLSRLKNLGAYNAGLLRSAANA 902 Query: 847 PMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMEN 906 P+QG++ADIIK AM+ + L+ + R+++QVHDELVFEV + + QI +MEN Sbjct: 903 PIQGSSADIIKIAMVQLHEVLR--NYQARLLLQVHDELVFEVPPQEWGELQLQIKSVMEN 960 Query: 907 CTRLDVPLLVEVGSGENWDQA 927 L VPL+V+V +G+NW + Sbjct: 961 AMSLSVPLVVDVRAGDNWMET 981 >UniRef50_C4Z0G0 DNA polymerase I n=23 Tax=Bacteria RepID=C4Z0G0_EUBE2 Length = 894 Score = 938 bits (2424), Expect = 0.0, Method: Composition-based stats. Identities = 352/933 (37%), Positives = 509/933 (54%), Gaps = 54/933 (5%) Query: 8 PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 LIL+DG S L RA++ P LTN+ G T AMYG LN+L + + KP + V FD Sbjct: 4 KLILIDGHSILNRAFYGVPDLTNAEGIHTNAMYGFLNILFKFLDEEKPDYITVAFDLSAP 63 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 TFR ++F+ YK R PM +L+ Q+ + ++KAM + ++ G EADD++GT+A+E+ Sbjct: 64 TFRHKVFDGYKGTRKPMQPELKQQVPLMKELLKAMNITVVEQEGYEADDILGTIAKESAA 123 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTNTILG------PEEVVNKYGVPPELIIDFLA 181 G V I +GD+D+ QL +I + T + P +V N YGV P ID A Sbjct: 124 KGIDVSIVSGDRDLLQLADEHIKIRIPKTKKGVTEVEDYYPSDVFNLYGVTPHEFIDVKA 183 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGD+SDNIPG PGVG KTA A++Q LD ++ ++ + +N E Sbjct: 184 LMGDTSDNIPGAPGVGPKTASAIIQKYHSLDNVFEHLCELK------PPKAKISITENVE 237 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 +S L+ IK DV ++ E + E LFKKY FK E + Sbjct: 238 QIKMSRFLSEIKIDVPIDYKVEDSKAGDFFNENSYELFKKYNFKNMLKKFENTDII---- 293 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 + Y KA A E L Sbjct: 294 ----------------------AKDPECYEYFKKISDFADVENVFNKAVDIAGGIEKIGL 331 Query: 362 D-NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN 420 L+ + + YIPV+ ++ + + N Sbjct: 332 SIVRENELIAVGITLSDTEIYYIPVSGFVTESYLADRLSDVVSV------ASNRNIASAN 385 Query: 421 LKYDRGILANYGIE-----LRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEE 475 +K I I DT + +Y+L+ +D +SL +L + E Sbjct: 386 IKDYLDIFEKDKINGYPLVSEKAFIDTAIAAYLLHPSNESYDYESLGREFLSLTYPSKTE 445 Query: 476 IAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVP 535 + GK N+ A + +YA + + K+ L K + +FE IEMPL+ Sbjct: 446 LLGKLSINKAVNE-AEDNLIKYACLSSYAYYKCADKITEQL-KSENMYELFETIEMPLIF 503 Query: 536 VLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG 595 VL +++ G+ +D + L ++S+ L +++ LEK+ +E AGEEFN++S KQL ILFE+ G Sbjct: 504 VLFEMQQQGISVDKQALVDYSKVLGTKISVLEKEIYEAAGEEFNINSPKQLGVILFERLG 563 Query: 596 IKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRV 655 + KKT G ST+ +VLE+LA DYP+ ILEYR LAKLKSTY D L I + GR+ Sbjct: 564 MPNGKKTKSG-YSTAADVLEKLAPDYPVVSKILEYRQLAKLKSTYADGLTQYI-SEDGRI 621 Query: 656 HTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMA 715 H +++Q +TATGR+SST+PNLQNIP+R E G+ IR+ F+ + +V + ADYSQIELRI+A Sbjct: 622 HGTFNQTITATGRISSTEPNLQNIPIRMEMGKAIRKVFVPKDGFVFLDADYSQIELRILA 681 Query: 716 HLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLAR 775 H+S D+ L+ A+ DIHRATAA+VFG+PLE VT EQRR+AKA+NFG+IYGMS+FGL++ Sbjct: 682 HMSGDEKLIEAYNSSADIHRATAAQVFGVPLEEVTDEQRRNAKAVNFGIIYGMSSFGLSQ 741 Query: 776 QLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGAR 835 L+I RKEA++Y++ YF YP + +++ + AKE+GY T+ RR +P+IKSSN + Sbjct: 742 DLSISRKEAKEYIERYFASYPTIKTFIDGLVSDAKEKGYSLTMYNRRREIPEIKSSNFMQ 801 Query: 836 RAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDA 895 R+ ER A+NAP+QGTAADIIK AMI V L+ R R+I+QVHDEL+ E +D+VD Sbjct: 802 RSFGERVAMNAPIQGTAADIIKLAMINVYNALKEHNLRSRLILQVHDELLVETAEDEVDT 861 Query: 896 VAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 V + + M+N L VPL V++ G++W +AH Sbjct: 862 VKQIMLDGMKNAVSLKVPLEVDLKEGKDWLEAH 894 >UniRef50_C6XHK7 DNA polymerase I n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XHK7_LIBAP Length = 976 Score = 937 bits (2423), Expect = 0.0, Method: Composition-based stats. Identities = 360/983 (36%), Positives = 550/983 (55%), Gaps = 72/983 (7%) Query: 5 PQNPLILVDGSSYLYRAYHAFPPLTNS-AGEPTGAMYGVLNMLRSLI----MQYKPTHAA 59 +N L LVDGSS++YRA++A P L+ G P A+ G NML L+ + +H A Sbjct: 3 KENHLFLVDGSSFIYRAFYATPLLSRKHDGLPVNAIAGFCNMLWKLLQNSRKESIASHFA 62 Query: 60 VVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIG 119 V+FD TFR+E++ YK++RP +P+ L Q+ + +A G+P + + G EADD+I Sbjct: 63 VIFDYPAVTFRNEIYPDYKANRPKIPEMLLPQLPLVRLATQAFGIPAIEIQGFEADDIIA 122 Query: 120 TLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDF 179 T AEK G V I + DKD+ QLV+P L +T+ + E V+ K+G+PPE ++ Sbjct: 123 TYTYIAEKEGFAVTIISTDKDLMQLVSPTTCLYDTVKEEKIDIEHVIKKWGIPPEKMVCL 182 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 AL GDS DNIPG+PG+G KTA LLQ G L+ + +I K + + Sbjct: 183 QALTGDSIDNIPGIPGIGYKTAALLLQEYGNLENILINASRIKQ------KKRRENILEY 236 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 E A LS +L ++TDV + + E L ++ L+ K EF + V A Sbjct: 237 AETARLSRKLVMLRTDVPITIPLEHLILEDCNGPRLISFLKALEFTKLINRVATTYDCDA 296 Query: 300 KGAKP-----------------------------------------AAKPQETSVADEAP 318 +P + + + + Sbjct: 297 ANIEPVVLDINTTENKGIAIETEIDRDTTIKTSQFSSLSDQTSKINSEQTPQKLFLERLQ 356 Query: 319 EVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPG 378 +++ I+ D+Y I++ + ++ W+ KLE +F TD++D + + ++ + Sbjct: 357 KLSQYPINNDSYTKIVNTKDIQQWVQKLETIGSASFKIITDTMDAFHSKPIAIAISTLDQ 416 Query: 379 --------VAAYIPVA-HDYLDAPDQISR-ERALELLKPLLEDEKALKVGQNLKYDRGIL 428 +I ++ H D+ + + + L LK E+E LK+G N+KYD+ +L Sbjct: 417 KDDTSFKVETIFIDLSVHTSQDSTGKNTLTKEILSYLKKFFENEHFLKIGHNIKYDKLVL 476 Query: 429 ANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQ 488 YGI +RG D ML SY+L+S HD+ S+A++WL + T +EI K+ + ++ Sbjct: 477 HRYGISMRG-FEDIMLMSYVLDSGRSSHDIASIAQKWLSY---TRKEILKSRKSSIPIDK 532 Query: 489 IALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKID 548 I+ + +A E+++V LQL L + P L K L+V+E ++ P++ V+S++E G++ID Sbjct: 533 ISDSQVQEHAIENSNVILQLWLLLRPKLIVEK-LLHVYERLDKPMIDVVSQMEITGIQID 591 Query: 549 PKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPS 608 +L S E++ L LE+ ++++GE+FNLSS KQL ILF K KT G Sbjct: 592 QDLLKQVSAEISKNLLSLEENIYDLSGEKFNLSSPKQLGDILFTKLKFPSGAKTKTGQWK 651 Query: 609 TSEEVLEELA-LDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATG 667 T+ + LE++ D P+ K ILE+R L+K+KSTY D LP IN +T RVHT Y A T TG Sbjct: 652 TTAQDLEQINCGDNPIIKNILEWRQLSKIKSTYADSLPNHINKRTQRVHTFYSLASTMTG 711 Query: 668 RLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAF 727 RL+S +PNLQNIP++ + G++IR+AFI+P ++SADYSQIELRI+AH+++ L F Sbjct: 712 RLASLEPNLQNIPIKTDLGQKIRRAFISPPTKKLISADYSQIELRILAHIAKITPLYQVF 771 Query: 728 AEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKY 787 DIHR AAE+FG+ +E V+ + RR AK INF +IYG+S F LA QL IPR EA Y Sbjct: 772 ENSLDIHRMVAAEIFGVNIEKVSPQMRRHAKTINFSIIYGISPFRLATQLRIPRSEAADY 831 Query: 788 MDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAP 847 + YF R+PG+ EY+E+T+ ++ GYVET+ GRR++ +I S + R ERAAINAP Sbjct: 832 IKRYFHRFPGIHEYIEKTKNFVRQNGYVETIFGRRIHYDEINSPKSSIRNINERAAINAP 891 Query: 848 MQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENC 907 +QG+AADI +RAMI+V L+ + +M++Q+HDELVFEV ++++ ++ I ME Sbjct: 892 IQGSAADITRRAMISVHKSLEDHKLATKMLLQIHDELVFEVPEEEITTASQIIVHSMEKA 951 Query: 908 ----TRLDVPLLVEVGSGENWDQ 926 L VPL V + NW + Sbjct: 952 CLPKINLRVPLKVNIKVSNNWQE 974 >UniRef50_A6FZM5 DNA polymerase I n=2 Tax=Deltaproteobacteria RepID=A6FZM5_9DELT Length = 898 Score = 937 bits (2421), Expect = 0.0, Method: Composition-based stats. Identities = 368/937 (39%), Positives = 529/937 (56%), Gaps = 51/937 (5%) Query: 4 IPQN-PLILVDGSSYLYRAYHAFP-PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 +P LIL+D SS +YRAY+A P + + G T A+YG M R ++ +P AVV Sbjct: 1 MPTPERLILIDASSLIYRAYYAIPANFSTADGLHTNAIYGFATMFRKILSGRQPERGAVV 60 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 FDA GKTFR+E + YK+ RP M +LR Q+ + +V+A P L V G EADD+IGTL Sbjct: 61 FDAPGKTFREEQYPEYKAQRPRMDPELREQLPWVDKLVEAHRFPHLRVPGYEADDIIGTL 120 Query: 122 AREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLA 181 R+A AG V I +GDKD AQL+ P + +I+T+ + E V K+GVPP L ID+LA Sbjct: 121 TRQAVDAGMEVYIISGDKDFAQLIGPTVRMIDTLRDVTFDAELVRKKWGVPPSLFIDYLA 180 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 L+GD DNIPGVPG+G KTA+ LL G L+ + ++ G +LE N E Sbjct: 181 LVGDKVDNIPGVPGIGPKTAKKLLDAYGDLEGVLTHTSELKG-------KQKERLEDNAE 233 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 A +S +LATI T VELEL E L++ AA EL L+K+ EF ++ Sbjct: 234 QARMSQKLATIDTQVELELGLEDLKLVPVAAAELNALYKRLEFYSLLSE----------- 282 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKL--EKAPVFAFDTETD 359 +E + A ++ + E L A +A L + A D Sbjct: 283 -------------EEVAKGEAKAQVGADFGAVTSLEQLDALLASLPGPEDGAVATMAIVD 329 Query: 360 SLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQ 419 + + L GL+ ++ G +IP+ + E L L+P LED K K+G Sbjct: 330 APSAVRGELAGLALSVGAGHGRFIPLHCEGGLG------EAGLAKLRPWLEDPKRYKLGH 383 Query: 420 NLKYDRGILANYGIELRGIAFDTMLESYILNSVAG-RHDMDSLAERWLKHKTITFEEIAG 478 + K L G+ L GI DTM+ES+++ H +D L + +L+ + I G Sbjct: 384 DCKASWVALRRKGVALAGIVGDTMIESFLVEPNKLIPHRLDQLTKEYLQRTIPPQKRILG 443 Query: 479 KGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLS 538 GK F+Q+ E + + +++ L G + E + +PL VL Sbjct: 444 SGKRLKRFSQLDAEALAPWCCTQVEAVAAAFVEIRERLDAE-GHRDTLEQVSLPLSWVLG 502 Query: 539 RIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKP 598 ++E +GV ID + L SEE RLA+LEK EIAG EFN++S+KQL +LF++ + Sbjct: 503 QMELDGVAIDSEDLGKMSEEFGERLAKLEKTIFEIAGREFNIASSKQLGAVLFDELELPV 562 Query: 599 LKKTPGGAPSTSEEVLEELAL-----DYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTG 653 +K+T G ST+ EVLE LA + + K +LE+R LAKL +TYTD L +NP +G Sbjct: 563 IKRTKTG-YSTNAEVLERLAGKTKHPKHTIAKYLLEHRKLAKLINTYTDVLQAAVNPDSG 621 Query: 654 RVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRI 713 R+H ++ Q +GRL +T+P+LQ P++ EG+R+RQAF+ Y ++SAD+SQIELR+ Sbjct: 622 RIHATFQQTAGVSGRLITTEPDLQRTPIKTPEGKRVRQAFVTRPGYKLISADWSQIELRL 681 Query: 714 MAHLSRDKGLLTAFAEGKDIHRATAAEVFGL--PLETVTSEQRRSAKAINFGLIYGMSAF 771 +AH S D L+ AFA+G D+H TAA++F + E V+ EQR K +NF IYG A Sbjct: 682 LAHFSSDAHLVEAFAKGLDVHARTAAQLFEVGGGPEKVSREQRGVGKLVNFATIYGQGAT 741 Query: 772 GLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSS 831 L + L +PRK+AQ Y+D YF Y GV ++++ T AQA G+VETL GRR Y+P++ S+ Sbjct: 742 ALGQILKVPRKQAQAYIDGYFAYYSGVRDWLDGTMAQANVDGFVETLLGRRRYIPELSSN 801 Query: 832 NGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKD 891 N R A ER A N P+QG+AADI K AM+ +D L+A++ RM++Q+HDELVFE Sbjct: 802 NWQDRQAGERIAANTPIQGSAADICKLAMLGIDRQLRAQKLTTRMLLQIHDELVFEAPVA 861 Query: 892 DVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 +V+AV + ME+ L VPL+V+VG G+ W +AH Sbjct: 862 EVEAVVAIVRGQMESVVELRVPLVVDVGVGDTWAEAH 898 >UniRef50_C4Z982 DNA polymerase I n=2 Tax=Clostridiales RepID=C4Z982_EUBR3 Length = 903 Score = 935 bits (2418), Expect = 0.0, Method: Composition-based stats. Identities = 335/935 (35%), Positives = 505/935 (54%), Gaps = 49/935 (5%) Query: 8 PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 L+L+DG S L RAYH P LTNS G T A+YG LN++ ++ + KP + V FD Sbjct: 4 KLVLIDGHSILNRAYHGLPDLTNSEGLHTNAVYGFLNIMFKILDEEKPDYLTVAFDVHAP 63 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 TFR +F+ YK R PM ++LR Q+ + M+ AMG+ ++ G EADD++GTL+ AEK Sbjct: 64 TFRHRMFDAYKGTRKPMDEELRQQVPMIKEMLTAMGIKIVEKEGYEADDILGTLSVRAEK 123 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTNTI------LGPEEVVNKYGVPPELIIDFLA 181 AG V I +GD+D+ QL T ++ + T +V+ KYGV P+ ID A Sbjct: 124 AGMDVAIISGDRDLLQLATDHVMVRIPKTKKTGTEIENYNTADVIEKYGVTPKEFIDVKA 183 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 L GD+SDNIPGVPG+GEKTA AL+ ++ ++ + E + + + + E Sbjct: 184 LQGDTSDNIPGVPGIGEKTAGALIAKYHCIEAVHEDAENVK------PPRASKNIVEYWE 237 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQP----AAEELLGLFKKYEFKRWTADVEAGKWL 297 A +S +LATI D ++ ++ EE L K+YEFK + Sbjct: 238 QALMSKELATIILDAPVDYEFSDAKLSGGVESLYTEEAFLLCKRYEFKNMLSRFNVEAPK 297 Query: 298 QAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTE 357 + +V + + E + +E Sbjct: 298 NNAEEHFVVVRDLKTA--------ESVFEKAKDREVAFAVVPGESLENSESDGQLSLFSE 349 Query: 358 TDSLDNISANLVGLSFAIEPGVAAYIPVAHD--YLDAPDQISRERALELLKPLLEDEKAL 415 +S + + +S +I + ++++ + P Sbjct: 350 -----PVSNDYLAVSICFSEEDIYFICTGDEISSSFLDEKLNTLEVKSWISP-------- 396 Query: 416 KVGQNLKYDRGILANYGI--ELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITF 473 +LK + + I + RG FD M+ +Y++N + G + D++A+ +L + Sbjct: 397 ----DLKTNLHRFKSKEIKADDRGRYFDMMVAAYLINPLVGEYPYDAVAKDYLGLMLSSK 452 Query: 474 EEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPL 533 ++ GK + + ++A A + + + L++ L ++ +IE+PL Sbjct: 453 KDYLGK-LDFTQMMKEDEKKAVDCACYEVYTAWKSKPVLLQKLKEM-NMLTLYRDIELPL 510 Query: 534 VPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEK 593 V VL +E G++ D L + ++L + + ELEKK +E AGEEFN++S KQL ILFEK Sbjct: 511 VFVLYDMENEGIRADGIKLKEYGDKLAVSITELEKKIYEAAGEEFNINSPKQLGVILFEK 570 Query: 594 QGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTG 653 G+ KKT G ST+ +VLE+LA +YP+ ILEYR L KLKSTY D L I G Sbjct: 571 LGLPNEKKTKTG-YSTAADVLEKLAPEYPIVADILEYRQLTKLKSTYADGLSGYI-ASDG 628 Query: 654 RVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRI 713 ++HT+ +Q +TATGRLSST+PNLQNIP+R E G+ IR+ F+ E + V +DYSQIELR+ Sbjct: 629 KIHTTLNQTITATGRLSSTEPNLQNIPIRIELGKLIRKVFLPEEGDLFVDSDYSQIELRV 688 Query: 714 MAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGL 773 +A LS D+ ++ AF G+DIHR+TA+ VF P + VT QRR+AKA+NFG++YG+SAFGL Sbjct: 689 LAALSGDERMIEAFKNGQDIHRSTASLVFDTPFDEVTDLQRRNAKAVNFGIVYGISAFGL 748 Query: 774 ARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNG 833 + L I RKEAQ Y+D YF +YP + E++++T AK+ GY +T+ GR +P++ SSN Sbjct: 749 SNDLGISRKEAQGYIDSYFVKYPKIKEFLDQTVLDAKKNGYTKTMFGRIRPIPELNSSNF 808 Query: 834 ARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDV 893 +R ER A+N+P+QGTAADIIK AMI V L E + R+I+QVHDEL+ E + + Sbjct: 809 MQRQFGERVAMNSPIQGTAADIIKIAMIRVHDRLLDEGLKSRLILQVHDELLIETKEAEK 868 Query: 894 DAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 D V K + + M + V + V G +W AH Sbjct: 869 DKVIKLLEKEMRGAVDMKVSMEVGTECGYDWYDAH 903 >UniRef50_C7GEY2 DNA polymerase I n=6 Tax=Clostridiales RepID=C7GEY2_9FIRM Length = 930 Score = 934 bits (2415), Expect = 0.0, Method: Composition-based stats. Identities = 344/943 (36%), Positives = 524/943 (55%), Gaps = 30/943 (3%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 M + L+L+DG S L RA+ P LTNS G T A+YG LN++ ++ + +P + V Sbjct: 1 MERTMGEKLVLIDGHSILNRAFFGIPDLTNSEGLHTNAVYGFLNIMFKILEEEQPDYLTV 60 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 FD TFR ++F YK R PM +LR Q+ + M+KAMG+ + G EADD++GT Sbjct: 61 AFDVSEPTFRHKMFAEYKGTRKPMAQELREQVPLMKEMLKAMGVTTIEKGGYEADDLLGT 120 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI------LGPEEVVNKYGVPPE 174 +A+++E+ G V + +GD+D+ QL T +I + T EV KY V P Sbjct: 121 IAKQSEQKGLTVSVVSGDRDLLQLATDHIKIRIPKTKRTGTEIEDYNAAEVQEKYQVTPI 180 Query: 175 LIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAA 234 ID ALMGD++DNIPGVPG+GEKTA A++ G ++ YA +++ + Sbjct: 181 EFIDVKALMGDTADNIPGVPGIGEKTATAIIAQYGSVENAYAHVDELK------PPRASK 234 Query: 235 KLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQP---AAEELLGLFKKYEFKRWTADV 291 L++ ++A +S LATI+ +++ ++ EE L K+ EF ++ Sbjct: 235 NLKEYYDLAQMSKTLATIEIHADIDYDLSGAKLNGISSLYTEEAYLLCKRLEF----KNL 290 Query: 292 EAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPV 351 ++ + A + EA +V A + D I+ + + + + Sbjct: 291 LNRFAVETPKNQAAEHFKLVEDRKEAEKVFAKLRGKDCGFYIVFGDKKRDSHEEADGQMN 350 Query: 352 FAFDTETDSLDNISANLVGLSF--AIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLL 409 + D+ + +V + A+E + A I + A ++L Sbjct: 351 LFAAGDMPGADSEPSGIVESAENDAVECCLGAAISTGEEETFFIKAGENLPAKQILSMFT 410 Query: 410 EDEKALKVGQNLKYDRGILANYGIELRGIA-----FDTMLESYILNSVAGRHDMDSLAER 464 E A +LK L ++ G FD +L +Y+LN + + + +A+ Sbjct: 411 ASEAASYATLDLKPQLAALGLLERQVNGNIGLSNLFDGVLAAYLLNPLKNEYPYEDIAKD 470 Query: 465 WLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLN 524 ++ + ++ GK + E Y A V + DL K +G + Sbjct: 471 YMGQMIPSKADLLGKLTIEQAMKDAP-EAFLNYVCYMAYVAQASKKTLETDL-KEEGMDH 528 Query: 525 VFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTK 584 +F IEMPLV L+ +E G+ + L + ++L +R+AELEK+ +E AGEEFN++S K Sbjct: 529 LFTEIEMPLVFTLADMENEGIIACREALTEYGDKLAVRIAELEKQIYEEAGEEFNINSPK 588 Query: 585 QLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKL 644 QL ILFEK + KKT G ST+ +VL+ LA +YP+ ILEYR L KLKSTY D L Sbjct: 589 QLGVILFEKLSMPYGKKTKTG-YSTAADVLDRLAPEYPIVSDILEYRQLTKLKSTYADGL 647 Query: 645 PLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSA 704 I K GR+HTS++Q +TATGRLSST+PNLQNIP+R E GR IR+AF+ E + + A Sbjct: 648 VNYI-AKDGRIHTSFNQTITATGRLSSTEPNLQNIPMRIELGRLIRKAFVPKEGFEFMDA 706 Query: 705 DYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGL 764 DYSQIELR++AH+S D+ L+ A+ E +DIHR TA++VF +P + VT QRR+AKA+NFG+ Sbjct: 707 DYSQIELRVLAHMSGDEKLIEAYREAQDIHRITASQVFHIPFDEVTDLQRRNAKAVNFGI 766 Query: 765 IYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLY 824 +YG+S+FGL++ L+I +KEA +Y++ YFE YP + +++ A+AKE+GYV T+ GRR Sbjct: 767 VYGISSFGLSQDLSISKKEAAEYIERYFETYPKIKTFLDGLVAEAKEKGYVTTMFGRRRP 826 Query: 825 LPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDEL 884 +P++ SSN +R+ ER A+N+P+QGTAADIIK AMI V L E + R+I+ VHDEL Sbjct: 827 VPELSSSNFMQRSFGERVAMNSPIQGTAADIIKIAMIRVHDRLLKENLKSRLILTVHDEL 886 Query: 885 VFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 + E ++ DAV K + + M L V L ++ G+NW +A Sbjct: 887 LVETAIEEEDAVRKILEEEMHGAADLAVTLEIDAHVGKNWYEA 929 >UniRef50_Q59156 DNA polymerase I n=6 Tax=Clostridia RepID=DPO1_ANATD Length = 850 Score = 932 bits (2408), Expect = 0.0, Method: Composition-based stats. Identities = 331/927 (35%), Positives = 502/927 (54%), Gaps = 86/927 (9%) Query: 8 PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 L++ DG+S LYRA+ A P LT S PT A+YG +N++ + Q KP + AV FD +G+ Sbjct: 2 KLVIFDGNSILYRAFFALPELTTSNNIPTNAIYGFVNVILKYLEQEKPDYVAVAFDKRGR 61 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 R +E YK++R PMPD+L+ QI + ++ A +P++ G EADDVIG+L + + Sbjct: 62 EARKSEYEEYKANRKPMPDNLQVQIPYVREILYAFNIPIIEFEGYEADDVIGSLVNQFKN 121 Query: 128 AGRPVLISTGDKDMAQLVTPNITL------INTMTNTILGPEEVVNKYGVPPELIIDFLA 181 G ++I TGD+D QL+ N+ + + + E V KYGV + D+ A Sbjct: 122 TGLDIVIITGDRDTLQLLDKNVVVKIVSTKFDKTVEDLYTVENVKEKYGVWANQVPDYKA 181 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 L+GD SDNIPGV G+GEK+AQ LL+ L+ +Y +KI ++ KLE K+ Sbjct: 182 LVGDQSDNIPGVKGIGEKSAQKLLEEYSSLEEIYQNLDKIK-------SSIREKLEAGKD 234 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 +A+LS +LATI D+ L + E L ++ E L + + EFK + + +Q + Sbjct: 235 MAFLSKRLATIVCDLPLNVKLEDLRTKEWNKERLYEILVQLEFKSIIKRLGLSEVVQFEF 294 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 + + E +S+ Sbjct: 295 VQQRTDIPDVEQK------------------------------------------ELESI 312 Query: 362 DNISANLVGLSFAIEPGVAA-YIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN 420 I + + L F Y ++ +++ E L+ +K+ + Sbjct: 313 SQIRSKEIPLMFVQGEKCFYLYDQESNTVFITSNKLLIEEILK--------SDTVKIMYD 364 Query: 421 LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG 480 LK L D M+ SY+L+S +++++L +L E K Sbjct: 365 LKNIFHQLNLEDTNNIKNCEDVMIASYVLDSTRSSYELETLFVSYLNTDI----EAVKKD 420 Query: 481 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI 540 K ++ + +L ++ L ++ENIE PL+PVL + Sbjct: 421 KKIVS----------------VVLLKRLWDELL-RLIDLNSCQFLYENIERPLIPVLYEM 463 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK 600 E+ G K+D L +++E+ ++ +LE + ++IAGE FN++S KQL ILFEK + +K Sbjct: 464 EKTGFKVDRDALIQYTKEIENKILKLETQIYQIAGEWFNINSPKQLSYILFEKLKLPVIK 523 Query: 601 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 KT G ST EVLEEL + + +IL+YR K+ +TY L INP +GRVHT++ Sbjct: 524 KTKTG-YSTDAEVLEELFDKHEIVPLILDYRMYTKILTTYCQGLLQAINPSSGRVHTTFI 582 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRD 720 Q TATGRL+S+DPNLQNIPV+ +EG+ IR+ F+ +V++ ADYSQIELRI+AH+S D Sbjct: 583 QTGTATGRLASSDPNLQNIPVKYDEGKLIRKVFVPEGGHVLIDADYSQIELRILAHISED 642 Query: 721 KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 + L++AF DIH TAAEVFG+ + VT E R AKA+NFG++YG+S +GLAR + I Sbjct: 643 ERLISAFKNNVDIHSQTAAEVFGVDIADVTPEMRSQAKAVNFGIVYGISDYGLARDIKIS 702 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 RKEA ++++ YFERYP V EY++ T A++ G+V TL R+ Y+ DIKS+N R AE Sbjct: 703 RKEAAEFINKYFERYPKVKEYLDNTVKFARDNGFVLTLFNRKRYIKDIKSTNRNLRGYAE 762 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 R A+N+P+QG+AADI+K AMI V L+ + ++I+QVHDEL+ E ++ D V + + Sbjct: 763 RIAMNSPIQGSAADIMKLAMIKVYQKLKENNLKSKIILQVHDELLIEAPYEEKDIVKEIV 822 Query: 901 HQLMENCTRLDVPLLVEVGSGENWDQA 927 + MEN L VPL+VEV G NW + Sbjct: 823 KREMENAVALKVPLVVEVKEGLNWYET 849 >UniRef50_Q02DA6 DNA polymerase I n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02DA6_SOLUE Length = 865 Score = 932 bits (2408), Expect = 0.0, Method: Composition-based stats. Identities = 350/934 (37%), Positives = 517/934 (55%), Gaps = 78/934 (8%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAF-----PPLTNSAGEPTGAMYGVLNMLRSLIMQYKP 55 M + + L L+D +++RAYHA PP+ S G T A+Y NMLR L Q+ P Sbjct: 2 MGAVARQKLFLIDTFGFIFRAYHARARTGAPPMRTSTGFSTEAVYIFNNMLRKLSKQHDP 61 Query: 56 THAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEAD 115 + A +F++ T R + F YK++R P DL QI + +++AM +P+L G EAD Sbjct: 62 PYVAAIFESGEATHRVQEFAEYKANRTETPPDLLDQIPFVRRVLEAMRIPILEYPGFEAD 121 Query: 116 DVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN-TILGPEEVVNKYGVPPE 174 DVIGT+ R AE G V+I + DKDM QLVT +++++N + + PEEV GVPP Sbjct: 122 DVIGTITRRAEAEGLDVVIVSSDKDMLQLVTEHVSMLNPAKDDKLYNPEEVKTFMGVPPV 181 Query: 175 LIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAA 234 + D LALMGDS DNIPG PG+G+K A+ +L+ G ++ ++ K Sbjct: 182 QVADLLALMGDSVDNIPGAPGIGDKGAKQILEKFGSIEAALERAAEVE------RKVYRE 235 Query: 235 KLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAG 294 L+ N + +S +LATI TDV +E T + ++ Q P L ++K+ EF ++ Sbjct: 236 SLQNNVDRIRMSKRLATISTDVPIEFTLDAVKAQAPDPGLLKAIYKEMEFHSLLKELGPS 295 Query: 295 KWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAF 354 + + Y I L+ W+A PV Sbjct: 296 EDTR----------------------------ERRYSVIGSAGELREWLAGAAGTPVAVA 327 Query: 355 DTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKA 414 T++ + + + + + LKP LED Sbjct: 328 ITKSTEGEFALDMIAADTIGLARKRG------------EACAVTSELIVELKPWLEDAAV 375 Query: 415 LKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFE 474 +KV ++K LA GIE RG D M+ ++L++ G +++ A R L K Sbjct: 376 VKVACDVKSAVLQLARLGIEARGFGHDVMIYGFLLDADPGGCGLENQAHRRLDLKL---- 431 Query: 475 EIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLV 534 G A + AD+TL+L+ ++ P + +G +++ IE+PL Sbjct: 432 --------------------GGAAEQHADITLELYEQLAPAIDG-RGLRKLYDEIELPLT 470 Query: 535 PVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQ 594 VL+R+ER G++ID L S + +++ L + H +AG+ FN+SS +QL +LFE Sbjct: 471 RVLARMERTGIRIDGAELKRLSVLMESQISGLTAEIHALAGKPFNISSPQQLGKVLFEDL 530 Query: 595 GIK-PLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTG 653 + P+K G ST+ +VL+ELA ++ + + +LEYR L KLK TY D LP +I+P TG Sbjct: 531 NLPAPVKYGKGKTISTAADVLDELAAEHEIVRKVLEYRQLTKLKGTYVDALPALIDPATG 590 Query: 654 RVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRI 713 R+HTS++Q ATGRLSS++PNLQNIP+R GR IR AF+ + + ++ ADYSQIELR+ Sbjct: 591 RLHTSFNQTGAATGRLSSSNPNLQNIPIRTSLGREIRAAFVPRDGWKLLVADYSQIELRL 650 Query: 714 MAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGL 773 +AH+S D+ L+ AF EG+DIH TAAEV G+P VT E RR AKA+NFG++YG+SAFGL Sbjct: 651 LAHMSGDELLVQAFREGEDIHTRTAAEVMGVPPLMVTPEARRDAKAVNFGIVYGISAFGL 710 Query: 774 ARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNG 833 A QL I R EA++Y+ YF RY GV ++E T A+ ++ G +TL GR +P+I N Sbjct: 711 AAQLGIGRAEAERYIKNYFARYVGVKRFIEETIAEVRKTGVTKTLFGRERPIPEINGRNP 770 Query: 834 ARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDV 893 R AER A+N+P+QGTAAD+IK AM+ +DA L A + M++QVHDELVFE +++ Sbjct: 771 NARGFAERTAVNSPLQGTAADLIKLAMVRIDAALAAGGFQAAMLLQVHDELVFECPPEEL 830 Query: 894 DAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 D V++ + + ME L VPL+V+VGSG+NW A Sbjct: 831 DEVSRMVKREMEGACELKVPLVVDVGSGDNWRDA 864 >UniRef50_C2MBR8 DNA polymerase type I n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MBR8_9PORP Length = 948 Score = 931 bits (2407), Expect = 0.0, Method: Composition-based stats. Identities = 355/965 (36%), Positives = 541/965 (56%), Gaps = 61/965 (6%) Query: 7 NPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 L L+D + +YRAY+AF PL ++ G T A+YG + L+ +I + +P + AV D Sbjct: 2 PTLYLLDAYALIYRAYYAFINRPLVDAQGRDTSALYGFASTLQDIIDKERPDYIAVAMDM 61 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 G TFR + + YK++RP P+ +R + + +V+A +PLL V G EADD+IGTL+R+ Sbjct: 62 PGGTFRHKEYPEYKANRPETPETIRFSMPYIKELVQAYQIPLLGVEGYEADDLIGTLSRQ 121 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVP-PELIIDF 179 A +AG V + T DKD QLV P+ + +LG EE+ KYG+ P +ID+ Sbjct: 122 AVEAGYEVRMVTPDKDYGQLVGPHAQMFAPQRTGSGFELLGAEEITAKYGIRYPLQMIDY 181 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 L L+GDSSDN+PG PG+G+ AQ LL+ ++ +YA +++ T A KL Sbjct: 182 LGLVGDSSDNVPGCPGIGKVAAQRLLEEFDTIEDIYARIDQVK-------PTYAKKLLAA 234 Query: 240 KEVAYLSYQLATIKTDVE-LELTCEQLEVQQPAAEELLGLFKKYEFKRWTADV------E 292 KE LS L TI TDV + +Q++ + P + +FK++ F + Sbjct: 235 KEQTMLSRHLVTIVTDVPGVTFDPDQMKWRGPDHAAVERIFKEFAFTSLLKRIGKPAATA 294 Query: 293 AGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDN-----YVTILDEETLKAWIAKLE 347 A L G AA ++ P T + + + E + +L Sbjct: 295 AQVGLFDLGGSSAAPSLPATIEVAGPVSATTPLENYKTVGVTFTEVQGYEAVSQLAKQLA 354 Query: 348 KAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKP 407 + V AFDTETD LD + A +VG+S + A +IP+ +A L LK Sbjct: 355 GSSVVAFDTETDGLDALCAGIVGMSLCADEKQAYFIPLPESAEEATH------ILSPLKE 408 Query: 408 LLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLK 467 L++DE+ LKV N K+D +L YG+ +DTML Y++++ G H +D LA L+ Sbjct: 409 LMQDERVLKVAHNAKFDLEVLTRYGLPEARPLYDTMLAHYLIDADQG-HSLDELAGGLLR 467 Query: 468 HKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFE 527 + TI +++++ L + + + YA+EDA VTL+L+ + L + + Sbjct: 468 YDTIRYKDLSPLEIFALRTD-VDPKLLCDYASEDAYVTLRLYQALHKQLSPTEQ--RLLT 524 Query: 528 NIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIA--GEEFNLSSTKQ 585 +E+PL+ VL +E+ G+ +D + L +EL + LEK+ + G ++S KQ Sbjct: 525 EVEIPLLYVLMHMEQRGIVLDIEALQRSRQELLESVLRLEKEIQSYSSRGLNLKVNSPKQ 584 Query: 586 LQTILFEKQG-IKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKL 644 + +LF++ ++ +KT G+ T+EE L L +P+ +IL+YR KL +TY D L Sbjct: 585 IGELLFDELQIMEKPRKTKTGSYVTNEETLLPLRSLHPVVALILDYREARKLLNTYIDPL 644 Query: 645 PLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE------- 697 P M P G++HTSY+QAVTATGRLSS++PNLQNIP+R++ GR +R+AF+A Sbjct: 645 PKMCYP-DGKLHTSYNQAVTATGRLSSSNPNLQNIPIRSDLGRPLRRAFVADPYYTPRLS 703 Query: 698 -------------DYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGL 744 V++SADYSQ+ELR+MAHLS+D ++ +F G DIH ATAA+VF + Sbjct: 704 ACAPVDHTHEKPIGAVLLSADYSQVELRVMAHLSQDPAMIHSFLSGDDIHTATAAKVFKV 763 Query: 745 PLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMER 804 E VT R AK NFG+ YG++ +GL+++LNIP EA + + YF + + +M Sbjct: 764 APEEVTPLMRSKAKTANFGINYGITPYGLSQRLNIPVGEAAELIKEYFATFTHIQAFMNE 823 Query: 805 TRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVD 864 A A E+GY ET GRR L +++++ GA+R AER AINAP+QGTAADIIK AMI V+ Sbjct: 824 AIALATERGYTETAFGRRRQLRNLRTARGAQRGNAERNAINAPIQGTAADIIKIAMIRVE 883 Query: 865 AWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCT-RLDVPLLVEVGSGEN 923 L +Q R +++QVHDELV V+ D+++ V + + ME VPL+VE+G+G++ Sbjct: 884 EELTKQQLRSYLVLQVHDELVLNVYLDELERVTALVREAMECAWPECSVPLVVEIGTGKD 943 Query: 924 WDQAH 928 W +AH Sbjct: 944 WLEAH 948 >UniRef50_Q55971 DNA polymerase I n=13 Tax=Cyanobacteria RepID=DPO1_SYNY3 Length = 986 Score = 930 bits (2404), Expect = 0.0, Method: Composition-based stats. Identities = 370/1003 (36%), Positives = 541/1003 (53%), Gaps = 94/1003 (9%) Query: 1 MVQIPQNPLIL-VDGSSYLYRAYHAFP-----PLTNSAGEPTGAMYGVLNMLRSLIMQYK 54 M ++PL+L VDG S +RAY+AF PL +AG PT +G LN L ++ K Sbjct: 1 MFMSAKSPLLLLVDGHSLAFRAYYAFGLSKKGPLRTTAGIPTSVCFGFLNSLMQVMESQK 60 Query: 55 PTHAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEA 114 P A+ FD + TFR E YKS+R P+D + L +++A+ L + +G EA Sbjct: 61 PAAIAIAFDRREPTFRHEADGAYKSNRQETPEDFAEDLSYLQQLLEALNLQTITYAGYEA 120 Query: 115 DDVIGTLAREAEKAGRPVLISTGDKDMAQLVTP--NITLINTMTN--------TILGPEE 164 DD++GTLA + AG V I +GD+D+ QLV+P NI+++ N L + Sbjct: 121 DDILGTLACQGSDAGYQVKILSGDRDLFQLVSPEKNISVLYLTRNPFSSNTGYDELDWQG 180 Query: 165 VVNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGL 224 VV+K GV P I+DF AL GD SD IPG+ G+GEKTA LL L+ +Y +I G Sbjct: 181 VVDKMGVTPAQIVDFKALCGDKSDCIPGINGIGEKTAIKLLAEYETLEKVYENLAQIKG- 239 Query: 225 SFRGAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEF 284 + +L+ K+ A S LA I DV L +T E L++ + + L+ L +K E Sbjct: 240 ------ALKTRLDNGKDDAMHSQMLARIVVDVPLPVTWEDLQLTGFSTDRLVPLLEKLEL 293 Query: 285 KRWTADVEAGKWLQAKGAKPAAKPQETSVADEAPE------------------------- 319 + + ++A + P E + Sbjct: 294 RTFIDKIQAFHRNFSDNQSPVPMGNEADNGEPKKTVKAKKSKEKVNPDDSQQLSLFDGVP 353 Query: 320 --------VTATVISYDNYVTILDEETLKAWIAKLEKAPV----FAFDTETDSLDNISAN 367 +T + I L+A + +L+K A+DTETDSLD + AN Sbjct: 354 VVNQEDGLITIQLPKQIQPQIITTIAQLEALVEELKKHTDADFPVAWDTETDSLDPLVAN 413 Query: 368 LVGLSFAI--EPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDR 425 LVG+ A EP AYIP+ H + Q+S +LL +L + KV QN K+DR Sbjct: 414 LVGIGCAWGQEPNQVAYIPLKHHQGE---QLSLGIIKDLLGEILGNAIYPKVLQNAKFDR 470 Query: 426 GILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERW-LKHKTITFEEIAGKGKNQL 484 +LA++GIEL G+ DTML SY+L H++ L R+ L ++++++ K Sbjct: 471 RVLAHHGIELGGVVLDTMLASYVLQPEET-HNLTDLCRRYNLGLVALSYKDLGLK--KDQ 527 Query: 485 TFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNG 544 T + LE AG+Y D T L K+ +L ++ + + IE PL +L+ +E G Sbjct: 528 TIADLPLETAGQYCGLDCYATYLLASKLQKELDQYPELKEILKEIEQPLEKILAAMEDRG 587 Query: 545 VKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQ--GIKPLKKT 602 ++ID L S++L L +E A+E AGE FNLSS KQL TILF+K K +KT Sbjct: 588 IRIDCDYLQTLSQQLAENLLTIETAAYEAAGESFNLSSPKQLGTILFDKLGLDRKKSRKT 647 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST LE+L D+P+ ILE+R LAKLKSTY D LP ++N +T R+HT ++QA Sbjct: 648 KTG-YSTDHATLEKLQGDHPIIDAILEHRTLAKLKSTYVDALPELVNGQTQRIHTDFNQA 706 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKG 722 VT+TGRLSS++PNLQNIP+R++ R+IR+AF+ +D+++VSADYSQIELRI+AHLS++ Sbjct: 707 VTSTGRLSSSNPNLQNIPIRSDFSRQIRRAFLPQKDWLLVSADYSQIELRILAHLSQEPV 766 Query: 723 LLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRK 782 LL A+ + +D+H TA +FG E +T +R K INFG+IYGM A AR+ I Sbjct: 767 LLQAYGDRQDVHGVTAKLLFGK--EDITPAERNLGKTINFGVIYGMGAQRFARETGISAV 824 Query: 783 EAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARR------ 836 E ++++D Y Y V +Y+E + +A +GYV T+ GRR Y + + R Sbjct: 825 EGREFIDRYHRTYAQVFDYLETMKLEAIAKGYVTTIVGRRRYFNFVTEALRQLRGKTVTE 884 Query: 837 ------------AAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDEL 884 A R+A NAP+QG++ADIIK AM+ + L++ + RM++QVHDEL Sbjct: 885 LDLVDVKMNYNDAQLLRSAANAPIQGSSADIIKIAMVKLAKLLESY--QTRMLLQVHDEL 942 Query: 885 VFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 +FE+ ++ + +A I ME L VPL+VE+ G NW +A Sbjct: 943 IFEMPPEEWEELAPLIQNTMEQALTLSVPLVVEMHRGSNWMEA 985 >UniRef50_Q3ABL3 DNA polymerase I n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ABL3_CARHZ Length = 831 Score = 930 bits (2404), Expect = 0.0, Method: Composition-based stats. Identities = 339/926 (36%), Positives = 509/926 (54%), Gaps = 102/926 (11%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 ++LVDG+S L+RA+ A PPL + GEPTGA+YG L ML +I KP + AV FD Sbjct: 2 GKVVLVDGNSLLHRAFFALPPLKTTKGEPTGAVYGFLTMLFRVIKDEKPEYLAVAFDISR 61 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 KTFR E F YK HR PD+L Q + ++K + +P + + G EADD+IG L+R Sbjct: 62 KTFRTEQFTAYKGHRKEAPDELVPQFALVREVLKVLNVPYIELDGYEADDIIGHLSRAFA 121 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNTI----LGPEEVVNKYGVPPELIIDFLAL 182 G V+I T D+DM QLV + T + ++ YG+ P+ ++D L Sbjct: 122 GQGHEVVIYTADRDMLQLVDEKTVVYLTKKGITELVKMDLAAILENYGLKPKQLVDVKGL 181 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 MGD SDNIPGVPG+GEKTA L++ G ++ + A +++ + KL +++ + Sbjct: 182 MGDPSDNIPGVPGIGEKTALDLIKTYGSVEEVLAHKDELK-------PKLREKLAEHENL 234 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A +S QLATI ++ LE++ E L+V++P EE+ LF + EFK + ++ Sbjct: 235 AKISKQLATILREIPLEISLEDLKVKEPNYEEVAKLFLRLEFKSFLKEI----------- 283 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 P++ + V + ET + IA + + D E Sbjct: 284 --------------EPKIKKEYQEGKDLVQVETVET-EGQIAVVFSDGFYVDDGEKTKFY 328 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 ++ L ++ + ++K + + K Sbjct: 329 SLDR-----------------------------------LNEIEEIFRNKKI--ITDDAK 351 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 + G+ + FD + +Y+LN + L +LK+ +E++ Sbjct: 352 GIYHVCLEKGLTFPEVCFDARIAAYVLNPADQNPGLKGL---YLKYDLPVYEDV------ 402 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 + + L +M + + + +F IE+PL PVL+++E Sbjct: 403 ----------------SLNIRGLFYLKKEMMKKIFE-QEQERLFYEIELPLTPVLAQMEH 445 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 G+++D + L S EL ++ EL ++ + +AGEEFNL+S +QL ILFEK G+ +KKT Sbjct: 446 TGIQVDREALKEMSLELGEQIEELIREIYVLAGEEFNLNSPRQLGVILFEKLGLPVIKKT 505 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST EVLEEL + + IL YR L KLKSTYTD L +IN +TG++HT+++Q Sbjct: 506 KTG-YSTDAEVLEELLPFHEIIGKILNYRQLMKLKSTYTDGLMPLINERTGKLHTTFNQT 564 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY-VIVSADYSQIELRIMAHLSRDK 721 T TGRL+S++PNLQNIP+R E GR++R+ FI Y IVSADYSQIELR++AH S + Sbjct: 565 GTLTGRLASSEPNLQNIPIRLELGRKLRKMFIPSPGYDYIVSADYSQIELRLLAHFSEEP 624 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 L+ A+ +G+DIHR TA+EVFG+ LE VT E R AK++NFG++YG+S FGL R L IPR Sbjct: 625 KLIEAYQKGEDIHRKTASEVFGVSLEEVTPEMRAHAKSVNFGIVYGISDFGLGRDLKIPR 684 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 + A KY+ YF YP V EY++ A+E+GYV TL GRR Y+P++ S N + ER Sbjct: 685 EVAGKYIKNYFANYPKVREYLDELVRTAREKGYVTTLFGRRRYIPELSSKNRTVQGFGER 744 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 A+N P+QG+AADIIK AMI V+ L+A + + R+++ VHDELV EV ++++ V + Sbjct: 745 TAMNTPLQGSAADIIKLAMINVEKELKARKLKSRLLLSVHDELVLEVPAEELEEVKALVK 804 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQA 927 +ME+ L VPL+ EVG+G+NW +A Sbjct: 805 GVMESVVELKVPLIAEVGAGKNWYEA 830 >UniRef50_C7RDU0 DNA polymerase I n=3 Tax=Anaerococcus RepID=C7RDU0_ANAPD Length = 879 Score = 928 bits (2399), Expect = 0.0, Method: Composition-based stats. Identities = 321/924 (34%), Positives = 501/924 (54%), Gaps = 53/924 (5%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 ++L+DGSS ++RA+ A P LTN+ G T +YG L M + +YKP + V FD Sbjct: 3 KTVMLIDGSSLIFRAFFALPKLTNNDGVMTNGVYGFLTMYNNAFDRYKPDYVLVAFDRAS 62 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 KTFR + FE YK R MP +L Q L ++ ++ + + G EADD++GT A+ A+ Sbjct: 63 KTFRHKEFEDYKGTRDKMPSELSYQFGILKDILDSLNVKYTDLDGFEADDIVGTYAKMAQ 122 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLAL 182 +AG ++ TGD+D QLV I + T + + ++G+ P+ +I+ L Sbjct: 123 EAGYESVLITGDRDYLQLVDEKIVVNLTKKGVSETKEYTVDTIKEEFGLSPKQLIEVKGL 182 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 GD SDNIPGV G+G K A +Q G ++ LY ++++G K L ++ + Sbjct: 183 EGDKSDNIPGVDGIGPKKAIGFIQKYGSIEGLYDHIDEVSG------KKTKQTLIDSEAI 236 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 AY+S ++ TI T +E E+L+V+ P E L + KY F ++ D++ G Sbjct: 237 AYMSKKIGTIVTSAPVEFDLEELKVKDPDLESLREKYSKYNFNKFLEDMDGGDSP----- 291 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 D T E I ++K F F + + Sbjct: 292 -----------------------KEDKDFTYEKLENPDKLIEAIKKNKEFTFKSIYEGDR 328 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 I + + L I + K + EDE+ +K ++K Sbjct: 329 YIHSEIYKLGIKTTDTPTYIID------------PDSDFVSKFKEIFEDEEIVKNSFDIK 376 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 D +L GI L+ D ML Y+++ +D+ L++ +L ++ + ++ GKGK Sbjct: 377 EDVVLLDKLGINLKLPYDDMMLMHYLIDPSRSSYDLKVLSQSYLDYEVKSPVDLLGKGKK 436 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 L + + +E G Y A + + L ++ L++++ IE+ L VL+ +E Sbjct: 437 ALKYQDLDFDELGNYLASGINAIEDSKEILEDKLDEYH-MLDLYKEIEIKLSKVLADMEI 495 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 G D KVL + E + + ++ ++ +E+AG EFN++STKQL +LF+ + +KKT Sbjct: 496 VGFVTDKKVLEDLKENIDKDIDKITEEIYELAGSEFNINSTKQLGEVLFKDLDLPVIKKT 555 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST+ +VLE+L + + I YR L KL+STY + L I+ + GR+ +++ Q Sbjct: 556 KTG-FSTNAQVLEKLRDKHQIIPKIERYRELFKLRSTYIEGLEKAID-EDGRIRSTFRQN 613 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKG 722 + ATGRLSS DPNLQN+P++ +EGR IR+AF A E +++ ADYSQIELRI+A LS D+ Sbjct: 614 IAATGRLSSQDPNLQNLPIKTDEGRLIRKAFRAEEGKILIDADYSQIELRILASLSGDRH 673 Query: 723 LLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRK 782 ++ AF EG DIH TA++VF L+ VT QR AKA+NFG+IYG+S +GL++ LNIPRK Sbjct: 674 MIDAFKEGVDIHTKTASKVFHTDLDKVTKRQRSEAKAVNFGIIYGISDYGLSQNLNIPRK 733 Query: 783 EAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERA 842 EA++Y+D Y YP + EYM+ +AKE GYVETL RR Y+P+I S N R+ +R Sbjct: 734 EAKEYIDNYMASYPSIKEYMDSIVEKAKEDGYVETLFKRRRYVPEINSRNFNVRSFGQRV 793 Query: 843 AINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQ 902 A+N P+QGTAADIIK AMI D L+ ++++Q+HDE++ E + D K + + Sbjct: 794 ALNTPIQGTAADIIKIAMIETDKNLKKAGLDAKIVLQIHDEIILEADESSKDEAIKILRE 853 Query: 903 LMENCTRLDVPLLVEVGSGENWDQ 926 MEN T L+VPL+V++ +G + + Sbjct: 854 SMENATDLEVPLIVDIDTGVSMYE 877 >UniRef50_A8SN89 DNA polymerase I n=2 Tax=Clostridiales Family XI. Incertae Sedis RepID=A8SN89_9FIRM Length = 888 Score = 928 bits (2398), Expect = 0.0, Method: Composition-based stats. Identities = 331/929 (35%), Positives = 492/929 (52%), Gaps = 55/929 (5%) Query: 2 VQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 ++ ++L+DGSS ++RA++A LT G +YG LNM + PTH V Sbjct: 9 LENKMKKILLIDGSSLIFRAFYAIRNLTTKDGVFVNGVYGFLNMYYKALELINPTHIFVA 68 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 FD KTFR F YK R P+++ Q L ++ +M + L + EADD+IGT+ Sbjct: 69 FDKGSKTFRHNEFADYKGTRDNAPNEITYQFGILKDLLSSMNVNYLELDEYEADDIIGTI 128 Query: 122 AREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELII 177 A+ A+K G V I TGD+D QLV NI + T ++ E ++ +Y + P+ +I Sbjct: 129 AKLAQKEGFEVDIFTGDRDYLQLVDDNILVYLTKKGISEIKLMNTESILEEYDLSPKQLI 188 Query: 178 DFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLE 237 D AL GDSSDNIPGV GVGEKTA L+Q G L+ LY + + G + L Sbjct: 189 DVKALQGDSSDNIPGVKGVGEKTALKLIQEYGNLENLYENIDNLKG-------KLKENLV 241 Query: 238 QNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWL 297 K+ AYLS L I V +E E E++ E L +K EF Sbjct: 242 NEKDKAYLSRYLGEIFLRVPIERNIEDFEIKDVNYNEYLKKLEKLEFNSIINK------- 294 Query: 298 QAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTE 357 D E T ++ I E K++ + Sbjct: 295 --------------HFKDIKKESTVKSNQNIDFEVINFSEIF----EKIKNDDEISIKFF 336 Query: 358 TDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKV 417 +D + AYI D + + Sbjct: 337 SDKGYIYRKKFY-IGIYSNFNKKAYICKNFKLSDFEK--------------FCNLDIKII 381 Query: 418 GQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIA 477 G ++K + +E + D M+ Y+++S G +D+ ++ +L + + +E+ Sbjct: 382 GYDIKEELFFALKNNLEFKN-YEDVMILEYLIDSNKGNYDILKVSNEFLNLEILDLKEML 440 Query: 478 GKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVL 537 GKGKN+ TF ++ + ++ +++ L+ K ++++EN+E PLV VL Sbjct: 441 GKGKNKKTFFELEEDIIFKFISQNVFAISALYDIFIEK-AKENNLISLYENVEKPLVKVL 499 Query: 538 SRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIK 597 + +E+ GV +D + +EE + E+K +E+AGE FNL+S KQL ILFEK G+ Sbjct: 500 ADMEKTGVLVDRNKIIELNEEYSKLAYLYEQKVYELAGEVFNLNSPKQLGVILFEKIGLP 559 Query: 598 PLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHT 657 +KKT G ST EVLE+L+ + + IL+YR L KL STY D + I GRV T Sbjct: 560 VVKKTKTG-YSTDVEVLEKLSKKHEIVDYILKYRSLNKLISTYLDGILEYI-MDDGRVRT 617 Query: 658 SYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHL 717 S+ Q +TATGRLSS DPNLQNIP+R+EEG+ IR+ F+A ++ V + ADYSQIELR++AHL Sbjct: 618 SFKQMITATGRLSSVDPNLQNIPIRSEEGKNIRKVFVADKNKVFIDADYSQIELRVLAHL 677 Query: 718 SRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQL 777 S+D ++ +F DIH TA+EVFG+P+ VT QRRSAKA+NFG++YG+S +GL++ L Sbjct: 678 SKDSVMIDSFKNDLDIHYKTASEVFGVPINEVTDNQRRSAKAVNFGIVYGISDYGLSKDL 737 Query: 778 NIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRA 837 NI R EA++Y+D Y YP + YME +AK+ G+V T+ R+ Y+P+I S N R+ Sbjct: 738 NITRNEARQYIDGYLNTYPSIKSYMEEIVNKAKKDGFVTTILDRKRYIPEINSKNFNIRS 797 Query: 838 AAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVA 897 ER A+N P+QG+AADIIK AMI V L+ E+ ++I+Q+HDEL+ E + + + V Sbjct: 798 FGERIALNTPIQGSAADIIKLAMIKVYERLKIEKVNAKLILQIHDELIVECEESEKETVK 857 Query: 898 KQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 K + MEN +LD+PL V++ G NW + Sbjct: 858 KILKNSMENVYKLDLPLKVDICEGRNWYE 886 >UniRef50_A6G5W6 DNA polymerase I n=2 Tax=cellular organisms RepID=A6G5W6_9DELT Length = 933 Score = 927 bits (2396), Expect = 0.0, Method: Composition-based stats. Identities = 375/942 (39%), Positives = 531/942 (56%), Gaps = 34/942 (3%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG-K 67 + LVD +++L+RAYHA P LT G P A++G + M++++ ++ P H VFDA G K Sbjct: 1 MFLVDANNFLFRAYHALPMLTAPDGRPVNAVHGYVRMVQAIRKEFAPQHLLAVFDASGSK 60 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 +R EL+ YK++RPP P+DL+ QI + A+ +P L EADD+I + + Sbjct: 61 GWRRELYAEYKANRPPPPEDLQPQIPLVREATDALSIPWLEDPRYEADDLIARYVQAGVE 120 Query: 128 AGRPVLISTGDKDMAQLV-------TPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL 180 A V+I + DKD+ QLV ++ L +TM N +GP EVV K+GV PE + D L Sbjct: 121 AKLEVVIVSSDKDLMQLVAGPDDVREGSVRLWDTMKNRRVGPAEVVAKFGVGPEKLGDLL 180 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 AL GDSSDNIPGV G+G KTA +LL+ G L+ + + +KI K LE Sbjct: 181 ALAGDSSDNIPGVKGIGPKTATSLLETYGDLEGILSNTDKIKQ------KKRRENLETYA 234 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 E A +S +L ++TD +L E + + P + F FK + Sbjct: 235 EDARMSRKLVALRTDYDLPRPIEDVADKGPKRATMEAFFTPLGFKATLTGAVRAGGGSRR 294 Query: 301 GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDS 360 A + + + A + + + L A++A+ A AF+ E Sbjct: 295 VAPRTLVETIAKIKELEVDREAVEVLNADEAGVAT---LDAFLAQARAAEGLAFELELSG 351 Query: 361 LDNISANLVGLSFAIEPGVA----------AYIPVAHDYLDAP--DQISRERALELLKPL 408 D + A+ +GL+ AI A Y+P+AH L Q L + PL Sbjct: 352 DDPLRADPIGLALAIPKAKAEAPGALERAPIYLPMAHRSLSDGAVQQWKPSEVLAKVGPL 411 Query: 409 LEDEKALKVGQNLKYDRGILAN--YGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWL 466 L D K K LK + +L+ +E+R + DT+L SY L+ H+++ LA+ Sbjct: 412 LSDAKLPKYTHALKDQQVVLSRADLNVEVRNVVGDTLLASYTLDPARSDHNLEGLAKDIG 471 Query: 467 KHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLN-V 525 E I GKGK ++ F+Q+A+ AG +A E A + L M + + Sbjct: 472 GRLVGDRESIVGKGKKRVGFDQVAVAVAGPWAGERAGLAATLGPHMVAAAKAAGEQTQKL 531 Query: 526 FENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQ 585 + +E+PL VL+R+ER GV +D L ++EL ++ L+ E AG + +S KQ Sbjct: 532 YAEVELPLARVLARLERRGVLLDEAELQRQNDELGGQIDALKSTLQEEAGYAVDPNSPKQ 591 Query: 586 LQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLP 645 L +LFE++G+ KKT G ST + LEEL+L P+ KVIL+YR LAKLK+TY D LP Sbjct: 592 LGKLLFEERGLPAKKKTKTG-YSTDAQTLEELSLLDPIVKVILDYRSLAKLKNTYLDTLP 650 Query: 646 LMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSAD 705 ++NP TGR+HT + QAV ATGRLSS +PNLQNIP+R E+GRRIR+ F+APE +V+ D Sbjct: 651 KLVNPNTGRLHTHFRQAVAATGRLSSREPNLQNIPIRTEQGRRIRRGFVAPEGMQLVTLD 710 Query: 706 YSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLI 765 YSQIELR++AHLS+D L+ AF +G D+HR TAAEVF +P VTSEQRR AKA+NFG+I Sbjct: 711 YSQIELRVLAHLSKDPNLVKAFTDGADVHRRTAAEVFEVPEAEVTSEQRRVAKAVNFGVI 770 Query: 766 YGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYL 825 YG SAFGLARQL IP+ A KY+ YF++ PGV YM AK+ G+ ET+ GRR + Sbjct: 771 YGQSAFGLARQLGIPQGRAGKYIKAYFKKIPGVSSYMNALIDTAKDTGFAETIFGRRRRI 830 Query: 826 PDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELV 885 P+++ R+ ER A N P+QG+AADI+K AM+ V L ++P RM++ VHDEL+ Sbjct: 831 PELRRRGAVARSYGERIARNTPIQGSAADILKIAMVEV-ERLLDDKPWARMLLTVHDELI 889 Query: 886 FEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 FE D V + + ME LDVPLLVE G+G NW+ A Sbjct: 890 FECETDKVQELIGLVKPAMEKSASLDVPLLVEGGAGANWEDA 931 >UniRef50_B8FU82 DNA polymerase I n=2 Tax=Desulfitobacterium hafniense RepID=B8FU82_DESHD Length = 873 Score = 925 bits (2392), Expect = 0.0, Method: Composition-based stats. Identities = 324/925 (35%), Positives = 478/925 (51%), Gaps = 65/925 (7%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 + ++++DG+S R ++A P +T + G+PT ++G + ML L+++ KP + V FD Sbjct: 2 SKILILDGNSLANRTFYALPMMTTADGKPTNVLHGFMTMLLRLLLEQKPDYWVVAFDKTK 61 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 T R E + YK+ R PD L+ Q + L ++ A +P+L G EADD+I T+ AE Sbjct: 62 ATVRIEQYADYKAQRKETPDALKPQFDFLKELLTAFAMPILECPGYEADDIIATVTSLAE 121 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNTI----LGPEEVVNKYGVPPELIIDFLAL 182 + I TGD+D QL++P T+ T + KY + P IID L Sbjct: 122 QREWETQIYTGDRDALQLISPRTTVYLTRKGITEVDAYDEGALYEKYQLRPAQIIDLKGL 181 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 MGD+SDNIPGVPGVGEKTA LL G ++ + +KI+G K + L N + Sbjct: 182 MGDASDNIPGVPGVGEKTALKLLWEYGSVENVLDNIDKISG------KKLQENLRNNTDK 235 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A LS +LAT+ D+ LE+ ++L ++P + KY K +G Sbjct: 236 ALLSKKLATMLYDIPLEIDLDRLVYRRPDEKTFTAALDKYVLKSVARIWHEHHGAGEEGK 295 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 V+ + EE L + + Sbjct: 296 DT---------------PREEVLKPWPLRELTGEEWLARFPQWQADQGTLVLTCANTGGN 340 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 A + A V + + LLED + K + K Sbjct: 341 PHWARITAWGIA----------VGGESFILNWTDAAPEVRLAFSQLLEDSEVPKQVADSK 390 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 +L N I LRG++ D L +Y++N + + L + + Sbjct: 391 VLYSLLLNEEIILRGVSLDIGLAAYLINPTRNKFEPLELVKEY----------------- 433 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 I AE+A Q+ L + G + +E PL P+L+ +E+ Sbjct: 434 ------IPGAGEFANLAEEASALAQVADSYKETL-EELGLSALLHEMEEPLSPILAEMEK 486 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 G+ +D + L ELT+ L LE++ + AGE FN++S +QL ILFEK G+ P+KKT Sbjct: 487 QGIAVDVQRLQEFGRELTVELQRLEQEIYADAGETFNINSPQQLGHILFEKLGLPPMKKT 546 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST + LEEL + + + +L+YR L+KL STY + L I+ GRVHT++ Q Sbjct: 547 KTG-YSTDADTLEELRDQHSIVERVLDYRQLSKLMSTYVNGLLAQIHE--GRVHTTFQQT 603 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIELRIMAHLSRDK 721 VTATGRLSST+PNLQNIP+R E GR +R+ F E +V++SADYSQIELRI+AH S+D+ Sbjct: 604 VTATGRLSSTEPNLQNIPIRLELGRLLRKVFTPTQEGWVLLSADYSQIELRILAHYSQDE 663 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 L +F+ +D+H TA+EVFG+P+ VT + RR AKA+NFGLIYG++ FGL R L +PR Sbjct: 664 VLCESFSLNQDVHTRTASEVFGIPMAEVTKDMRRKAKAVNFGLIYGLTDFGLGRDLGVPR 723 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 KEA+ Y++ YF RY GV Y+E +AKE+G V TL R +P+++ N +R ER Sbjct: 724 KEAKTYIETYFHRYEGVKRYLEEIVVKAKEEGQVRTLLNRLRRIPELRHPNRVQRQFGER 783 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 A+N P+QGTAADI+K AM+ V L+ R +++QVHDELV EV +D++ VAK + Sbjct: 784 IAMNTPIQGTAADIMKLAMLGVAEALKPY--RANLLLQVHDELVIEVAPEDLEEVAKVVR 841 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQ 926 + ME+ L VPL+ + +G NW Sbjct: 842 EEMESAFPLSVPLIADCKTGPNWYD 866 >UniRef50_B0S404 DNA polymerase I n=2 Tax=Finegoldia magna RepID=B0S404_FINM2 Length = 875 Score = 923 bits (2387), Expect = 0.0, Method: Composition-based stats. Identities = 310/928 (33%), Positives = 497/928 (53%), Gaps = 63/928 (6%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 +++DGSS L+R ++A LT G T ++G +NM S++ + P V FD K Sbjct: 3 KKALIIDGSSLLFRGFYAIRDLTTKDGIHTNGVFGFMNMYYSVMGKINPDLVVVCFDRKE 62 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 TFR E + YK +R P++L Q + L ++KAMG+ + + G EADD+ GTLA++A Sbjct: 63 PTFRHEKYSEYKGNRQETPEELIGQFDMLKELLKAMGVSYIDLKGYEADDIAGTLAKQAS 122 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLAL 182 V + TGDKD QL+ N ++ T I + + +YG+ P+ +ID L Sbjct: 123 SKDYDVYLLTGDKDYLQLIDDNTKVVLTKRGITETKIYDVDVLKEEYGITPKQMIDLKGL 182 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 MGD SDNIPG+ GVGEKTA +Q G ++ LY ++I+G K K+ +++ Sbjct: 183 MGDKSDNIPGIDGVGEKTALKYIQKYGSIEGLYEHVDEISG------KKTKQKVIDGEDI 236 Query: 243 AYLSYQLATIKTDVELE---LTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 AYLS +L TI TDV + E +++ + L+ + K EF + + + Sbjct: 237 AYLSRELGTINTDVPEDLMGFGIEDCTIKEADNDHLIEVLTKLEFNSFIKKLPNEE---- 292 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 S + + +E + A +++ F F D Sbjct: 293 --------------------------SNEKFEYENLDEKVDEIKAYIKENKKFTFALFND 326 Query: 360 SLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQ 419 + V + YI +E K E + K+ Sbjct: 327 D-YYVDNEPVIFAIYT---DKVYIT------------RNVELVESFKEEFESKDINKLSF 370 Query: 420 NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 ++K L YGI++ D ++ Y+L+ + M+ + + + E+I GK Sbjct: 371 DIKPCIYHLMRYGIDISYNYDDVVIIEYLLDPSKTSYSMERSDPKVIGYDFKPLEDITGK 430 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 GK++ T + +E Y + T +L+ K+ + + ++++ ++E+PL+ VL Sbjct: 431 GKSKKTILESDEKEIDNYVVKYMMFTNKLYEKISE--IEEEDMMHLYRDVEIPLIKVLCD 488 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 +E GV + + L E + +EK E+ G++ N++S+KQL +LFE + + Sbjct: 489 MEFTGVCVKKETLVEMGELFEDEIKSIEKSVEELIGKKININSSKQLAEVLFEDLELPVI 548 Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 KK G PST +EVLE L+ + + IL YR + KLK+TY D + +I K G++HT++ Sbjct: 549 KKNKTG-PSTDQEVLEALSGRHEIIDYILRYRTITKLKTTYIDGMVDLIK-KDGKIHTTF 606 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSR 719 Q + TGR+SST+PNLQNIP+R EEGR IR+AF+ E +++ ADYSQIELR++A L+ Sbjct: 607 QQTIAQTGRISSTNPNLQNIPIRTEEGRLIRKAFVPSEGNMLLDADYSQIELRVLADLAN 666 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 D+ +L AF G DIHR TA+EVF + + VTS QR +AKA+NFG++YG+ + L++ L+I Sbjct: 667 DEVMLDAFKHGADIHRKTASEVFKVDFDKVTSLQRSNAKAVNFGIVYGIGDYSLSKDLHI 726 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 RKEA++Y++ Y + Y G+ +YME A KE+GYVET+ RR Y+P++KS N R+ Sbjct: 727 TRKEAKEYIENYLDTYKGIKQYMEDIVAIGKEKGYVETIMNRRRYIPELKSKNYNVRSFG 786 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 ER A+N P+QG+AADIIK AM+ L E+ + ++I+QVHDEL+ + KD+ + V + Sbjct: 787 ERVALNTPIQGSAADIIKVAMVKFYNRLNEEKLKAKLILQVHDELIVDCPKDEREKVLEI 846 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWDQA 927 + +M + L V + ++V S +NW A Sbjct: 847 MKDVMTHAVDLKVDMKIDVNSADNWYDA 874 >UniRef50_D1AZX7 DNA polymerase I n=3 Tax=Campylobacterales RepID=D1AZX7_SULD5 Length = 885 Score = 922 bits (2383), Expect = 0.0, Method: Composition-based stats. Identities = 333/924 (36%), Positives = 507/924 (54%), Gaps = 46/924 (4%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L ++D + +R Y+A P L NS G PTG + G N + ++ ++ + D+KG Sbjct: 2 KTLTIIDTFGFFFRNYYALPQLRNSQGFPTGLLTGFANFIYAIKNEHDTDYVMFALDSKG 61 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 K FR EL +YK++RP P++L+ Q+ + ++ MG + G EADDVI + + A+ Sbjct: 62 KNFRHELDPNYKANRPEAPEELKKQLPVAISWIEKMGFKCYSEEGFEADDVIASAVKFAK 121 Query: 127 KAGRPVLISTGDKDMAQLVTP-NITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185 + G V I T DKD+ QL+ + + + M + E+ K+GV P+ I ++L+L+GD Sbjct: 122 RHGIKVRIVTHDKDLYQLIDDGRVVIYDPMKKIEIDSEKCFEKFGVYPDKINEYLSLVGD 181 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 ++DNIPGV G+G K A+ LL G ++ +YA E+IA + LE+ +E A+L Sbjct: 182 TADNIPGVKGIGPKGAKKLLDDFGSVENIYANLERIAN------PRSKSMLEEGRESAFL 235 Query: 246 SYQLATIKTDVELELTCEQLEVQQPAA-EELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304 S QL + + + T E + +KYE + + V P Sbjct: 236 SKQLVRLDDSLNIADTFEAFYFPCDNPLVNIADELEKYELRHMLSRVRNEALHVKIKEAP 295 Query: 305 AAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNI 364 + + + + D + L I +E+ AFDTET++LD Sbjct: 296 SNTFRA--------------------ILVDDAKILFNVIEGIEEGSWVAFDTETNALDAY 335 Query: 365 SANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYD 424 +A +VG SFA+ A Y+P+AH YL +QI E A E LK L K VGQNLKYD Sbjct: 336 NAKIVGFSFALNEHEAYYVPLAHHYLGVGEQIGMEEAKEALKKLF---KHKIVGQNLKYD 392 Query: 425 RGILANY-GIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQ 483 ++ N G+ L DTML +++LN +D+LA+R+ H + F+++ K +N Sbjct: 393 LAVIENNFGLRLSSSYADTMLMAWLLNP-ESNVGLDTLAKRFFNHDMVKFKDVVSKNEN- 450 Query: 484 LTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERN 543 F+ + L++A YA+EDA +TL+L+ K+ L L + + +E P + L R+E+ Sbjct: 451 --FSHVPLDKACEYASEDAWMTLKLYNKLHDML--EPRLLEIAKEVEFPFILTLMRMEKE 506 Query: 544 GVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTP 603 G+KID + + L+ + + +FNL+ST+QL T+LFE+ G+ P+KKT Sbjct: 507 GIKIDGAYFEALLKRTDGAIDALKHEIFTLCDAQFNLNSTQQLGTVLFEQLGLPPVKKTK 566 Query: 604 GGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPK-TGRVHTSYHQA 662 G ST E VL EL +P ILEYR L KL+STY + L + GRVHTS+ Q Sbjct: 567 TG-YSTDENVLNELLDKHPSIAKILEYRELYKLRSTYIEPLLKLSKESPLGRVHTSFIQT 625 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKG 722 T+TGRLSS DPNLQNIPV+ GR +R F+A E V++ DYSQIELR++AH S D+ Sbjct: 626 GTSTGRLSSKDPNLQNIPVKTALGREVRGGFVAKEGCVLIGIDYSQIELRLLAHFSNDEA 685 Query: 723 LLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRK 782 ++ AF +GKDIH TA ++FG E + +R AK+INFGL+YGM L+ L I Sbjct: 686 MVKAFRDGKDIHYETALKLFG---EQEAASKRSVAKSINFGLLYGMGPKRLSETLGISMA 742 Query: 783 EAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERA 842 EA++Y++ YF +P + Y+ QAK GYVETL GR+ + D + +N + A R Sbjct: 743 EAKRYIESYFATFPTIKAYVMEVAEQAKTTGYVETLLGRKRFF-DFEHANAMQYAGYLRE 801 Query: 843 AINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQ 902 A+N QG+AAD+IK +M + A L ++++Q+HDEL+FEV + + A + + Sbjct: 802 AVNTVFQGSAADLIKLSMNKIMATLI--HDEAKLLLQIHDELIFEVVESQAQSFALEAQK 859 Query: 903 LMENCTRLDVPLLVEVGSGENWDQ 926 +ME L +PL V + G+NW + Sbjct: 860 VMEEIYALRIPLKVSIAMGKNWGE 883 >UniRef50_A1QZY0 DNA polymerase I n=1 Tax=Borrelia turicatae 91E135 RepID=A1QZY0_BORT9 Length = 919 Score = 922 bits (2382), Expect = 0.0, Method: Composition-based stats. Identities = 327/937 (34%), Positives = 511/937 (54%), Gaps = 35/937 (3%) Query: 7 NPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 + L+D + ++R YH PLTN GE A G L +I + P + V FD+ Sbjct: 2 KEIYLIDALNIIFRNYHVMKNNPLTNKKGENVNAFIGFFKTLFFIIKEKNPENLIVTFDS 61 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 + +TFR + + YK+ R PD+L QI + + +P+ + G EADD+I + A++ Sbjct: 62 ETQTFRQQKYPSYKATRDAPPDNLIPQIYWIKESLIKANIPMFEIQGYEADDLIASFAKK 121 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTN--TILGPEEVVNKYGVPPELIIDFLAL 182 AE I + DKD+ QL++ ++ + + + V+ K+GV I D+L++ Sbjct: 122 AEINNYLTYIISPDKDLLQLMSAKTKILKIENSSFVEMDNDYVMKKFGVNKSQIKDYLSI 181 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 +GD SDNIPG+ G+GEK A LL L+ +Y + I L + +E Sbjct: 182 VGDRSDNIPGIKGIGEKGAAKLLNEFQTLNGIYDNLDSINN-------KYREILLKEREN 234 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A+LSY+L ++ D+EL + + E++L LF++Y + + Sbjct: 235 AFLSYELISLVEDLELPA--LEKFKLENLKEDILLLFEEYSATTLIKSYKTILKKRYATN 292 Query: 303 KPAAKPQETSVADEAPEV-----------TATVISYDNYVTILDEETLKAWIAKLEKAPV 351 + ET++ E+ Y TIL +E L I KL++A Sbjct: 293 QTQKSLFETNINQTDTEILQTTTSHSNALKTIQEENIKYETILKKEQLDLLIEKLKQANY 352 Query: 352 FAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLED 411 A DTET SL+ A ++G+S + + + YIP+ I + ++ Sbjct: 353 VAIDTETTSLNVHEAQIIGISVSFKEFESYYIPIETKE---KKTIEKAYIIQKFNEFF-K 408 Query: 412 EKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTI 471 + +GQN K+D IL + + FDTM+ +Y+++ + +D LAE++L HK I Sbjct: 409 AQPKLIGQNYKFDYKILKKHEFNVIPPYFDTMIAAYVIDPN-TKVSLDFLAEKYLMHKNI 467 Query: 472 TFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEM 531 +EEI T I LE YAAEDAD+T +L L K N+ +IEM Sbjct: 468 RYEEIV---AQNGTLKDIPLEMVSNYAAEDADITFRLFKIFTKKL-KEDNLENLMTDIEM 523 Query: 532 PLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILF 591 P V++ +E NG+ +D L + EL L +E + + G EFNL+STKQL T+LF Sbjct: 524 PFSNVITEMEENGIYLDKDYLRQYGYELDKELKLIENEIIKSIGIEFNLNSTKQLHTVLF 583 Query: 592 EKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPK 651 E+ + + ST +VLE + + +++YR +AKLK+TYTD L +N K Sbjct: 584 ERLNLVLPQNVK--QDSTDIKVLETIKEQHESIPKLIQYRQIAKLKNTYTDNLIEFVNEK 641 Query: 652 TGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIEL 711 T ++HT++ Q TATGR+SST PNLQNIP+++E+GR+IR+AF + + +SADYSQIEL Sbjct: 642 TNKIHTNFIQTKTATGRISSTSPNLQNIPIKDEKGRKIREAFKPEKGNIFISADYSQIEL 701 Query: 712 RIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAF 771 I+AHLS D+ L+ AF KDIH TA+++F + E VTS RR AK+INFG+IY MSAF Sbjct: 702 VILAHLSEDESLIEAFKNKKDIHIKTASQLFKVDEEKVTSSMRRIAKSINFGIIYRMSAF 761 Query: 772 GLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSS 831 L+++L+I R+EAQK++D YF Y + +++ ++ GY ETL RR Y+ +I S Sbjct: 762 RLSKELSIKREEAQKFIDSYFNLYSKIKTFIQNQIDFVRKNGYSETLLKRRRYIKEINSQ 821 Query: 832 NGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKD 891 N + R+ AER AIN+ +QG+A+DI+K AMI V L+++ + ++++QVHDE++ E + Sbjct: 822 NYSERSGAERIAINSTIQGSASDIMKIAMIKVYNELKSKNLKSKILLQVHDEMLIESPEQ 881 Query: 892 DVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 + + V K I +MEN L +PL V + +G++W + H Sbjct: 882 ECEEVNKIIKTMMENAYPLKIPLKVNIETGKSWGEIH 918 >UniRef50_B5RMA2 DNA polymerase I n=2 Tax=Borrelia RepID=B5RMA2_BORDL Length = 922 Score = 920 bits (2377), Expect = 0.0, Method: Composition-based stats. Identities = 326/940 (34%), Positives = 506/940 (53%), Gaps = 38/940 (4%) Query: 7 NPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 + L+D + ++R YH PLTNS GE A G L +I + KP + V FD+ Sbjct: 2 KEIYLIDALNIIFRNYHVMKNNPLTNSKGENVSAFIGFFKTLFFIIKEKKPENLIVTFDS 61 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 + +TFR + + YK+ R PD+L QI + + +P+ + G EADD+I + ++ Sbjct: 62 ETQTFRQKQYPSYKATRDAPPDNLIPQIHWIKEGLIKANIPMFELQGYEADDLIASFTKK 121 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI--LGPEEVVNKYGVPPELIIDFLAL 182 AE+ I + DKD+ QL++ + ++ + + V+ K+G+ I D+L++ Sbjct: 122 AEQNNYLTYIISPDKDLLQLISNQTKIFKIENSSFLEMNNDYVIKKFGINKSQIKDYLSI 181 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 +GD SDNIPG+ G+G+K A LL L+ +Y I L + KE Sbjct: 182 VGDPSDNIPGIKGIGQKGASKLLNEFHTLNGIYENLSLINN-------KYREILLREKEN 234 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAG-------- 294 A+LSY+L ++ D+EL + + E+++ LF++Y ++ Sbjct: 235 AFLSYKLISLVEDLELPS--LETFRLENLKEDIILLFEEYSATTLIKSYKSLLKKKNIIN 292 Query: 295 ------KWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEK 348 + A S A + Y TIL +E L I +L+K Sbjct: 293 TMQKSIFDINKTKANKENTKDLQSTTLYANTLKTIQEENVKYKTILKKEELDLLIEQLKK 352 Query: 349 APVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPL 408 A A DTET S++ +N++G+S + + + YIP+ ++ I +E ++ L Sbjct: 353 ASYIAIDTETTSINVYESNIIGISVSFKEFESYYIPIETKEKNS---IGKEYIIQKFNEL 409 Query: 409 LEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKH 468 + + +GQN K+D +L +G + FDTM+ +Y+++ + +D LA ++L H Sbjct: 410 F-NSQPKLIGQNYKFDYKVLKRHGFNVISAYFDTMIAAYVIDPN-TKVSLDFLAAKYLMH 467 Query: 469 KTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFEN 528 K I +EEI T I LE A YAAEDAD+T +L + L K ++ +N Sbjct: 468 KNIKYEEIV---PQHSTLKDIPLEIASNYAAEDADITFRLFNILRKKL-KEDNLESLMKN 523 Query: 529 IEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQT 588 IEMP V+ +E NG+ +D L + EL L +E + + G EFNL+S+KQL T Sbjct: 524 IEMPFSNVIIEMEENGIYLDSNYLTQYGHELEQELKTIENEVIQSIGIEFNLNSSKQLHT 583 Query: 589 ILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMI 648 ILFEK I K ST +VLE + + + ++ YR LAKLK+TYTD L I Sbjct: 584 ILFEKLNIIVPKNVK--QDSTDIKVLETIKDQHESIEKLINYRQLAKLKNTYTDNLIEFI 641 Query: 649 NPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQ 708 N KT ++HT++ Q TATGR+SST PNLQNIP++NE GR+IR AF + + +SADYSQ Sbjct: 642 NEKTNKIHTNFIQTKTATGRISSTAPNLQNIPIKNERGRKIRAAFKPTKGNIFISADYSQ 701 Query: 709 IELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGM 768 IEL I+AHLS D+ L+ AF KDIH TA+++F + +T RR AK+INFG+IY M Sbjct: 702 IELVILAHLSEDESLIEAFTHKKDIHIQTASKLFKVDEANITPSMRRIAKSINFGIIYRM 761 Query: 769 SAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDI 828 SAF L+++L+I R+EAQ ++D YF Y + +++ K+ GY ETL RR Y+ +I Sbjct: 762 SAFRLSQELSIKREEAQNFIDSYFNLYSKIKTFIQNQIDFVKQNGYSETLLKRRRYIREI 821 Query: 829 KSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEV 888 S N R AER AIN+ +QG+A+DI+K AMI V + + ++++QVHDE++ E Sbjct: 822 NSQNYLERTGAERMAINSIIQGSASDIMKIAMIKVYNEFKNNNLKSKILLQVHDEMLIES 881 Query: 889 HKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 +++ + I ++MEN L +PL + +G++W H Sbjct: 882 PEEECEKAQIIIKEMMENAYPLKIPLKTNIETGKSWGDIH 921 >UniRef50_D1VS49 DNA polymerase I n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VS49_9FIRM Length = 885 Score = 918 bits (2374), Expect = 0.0, Method: Composition-based stats. Identities = 329/928 (35%), Positives = 524/928 (56%), Gaps = 48/928 (5%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + +N +++DGSS +RA++A P L G T A+YG + ML + I + KP+H V FD Sbjct: 1 MSKNIFLIIDGSSLFFRAFYALPLLKTKRGIYTNAIYGFVMMLENAIERVKPSHIVVCFD 60 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 KGKTFR EL++ YK R P++L Q + ++K M + +L EADD+ GTL+ Sbjct: 61 RKGKTFRSELYKDYKGTRQKTPNELEQQFPLVRDILKYMNIVVLDSPVYEADDIAGTLSL 120 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDF 179 A K G + TGDKD QLV N ++ T ++ + + + YG+ P+ ID Sbjct: 121 IASKEGYKSYLLTGDKDYYQLVDDNTNVLMTRKGITELEVVNLQSINDDYGISPQEFIDL 180 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 LMGDSSDNIPGVPG+G KT L++ ++ LY +I+G K + LE+N Sbjct: 181 KGLMGDSSDNIPGVPGIGPKTGLKLIKEYSTIENLYNHLSEISG------KKLKENLEEN 234 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 K A++S +L TI +++L + L++++ E L L++ +EF + Sbjct: 235 KVQAFMSKKLGTIVRNIDLPVGLSDLKIKEYDYENLSKLYRDFEFNSILKRLP------- 287 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 E ++ E++ T N ++++ I ++ + FAF +D Sbjct: 288 ----------EKYQKEKTEEISDTFFQISN-------DSIEDIIENIKTSKSFAFKFISD 330 Query: 360 SLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQ 419 + ++ + + I + L LK L ED+ K+G Sbjct: 331 GKIYEGIDPFKIAILPKGYNTSVID------------YNKDNLSNLKALWEDDSIEKLGY 378 Query: 420 NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 +LK D +L I+L+ D+M+ Y+LNS +++D LA + + EE+ GK Sbjct: 379 DLKEDIIVLQYNKIDLKNYCHDSMIAEYLLNSTESNYEIDHLASSYFNKAYKSEEELLGK 438 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 G + F +I + Y + ++ ++ ++ G +++ N+E+PL+ VL+ Sbjct: 439 GVKKKKFQEIDEGDLNSYFSYILNMVYKISPLQMQKIEAE-GMKDLYVNVELPLIEVLAN 497 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 +E G++ D +L+ E++ R+ +LE ++ A E+FN++S KQL ILFEK + + Sbjct: 498 MEIVGIRTDVNILNEIDEKIKERINDLEFNIYKDADEQFNINSPKQLGQILFEKMDLPVI 557 Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 KKT G STS +VLE+L + ILEYR ++K+K+TY D L +IN KTGR+H+ + Sbjct: 558 KKTKTG-YSTSADVLEKLRGKSLIIDNILEYRKISKIKNTYIDGLRDVINKKTGRIHSRF 616 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSR 719 +Q VT+TGR+SST+PNLQNIP++ EGR IR+A ++ E +V +DYSQIELR++A LS Sbjct: 617 NQTVTSTGRISSTEPNLQNIPIKTHEGRLIRKALLSSEGSSLVDSDYSQIELRVLASLSN 676 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 D ++ AFA+G DIHR TA+EVF P + V+ E R AKA+NFG++YG+S +GL++ LNI Sbjct: 677 DTYMINAFADGLDIHRKTASEVFHTPYDEVSDELRSMAKAVNFGIVYGISDYGLSQNLNI 736 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 PRKEA+ Y+D Y + G+ +YM E+GYVETL RR Y+P++K+ N R+ Sbjct: 737 PRKEAKTYIDNYLGHFQGIKKYMNDIIHVGTEKGYVETLLHRRRYIPELKAKNFNIRSFG 796 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 ER A+N P+QGTAADIIK AM+ V L+ + + ++I+Q+HDELV + ++V V + Sbjct: 797 ERIALNTPIQGTAADIIKIAMVGVYKELKKKNLKAKLILQIHDELVVDAPDEEVAEVCEI 856 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWDQA 927 + +M+N + VPL V + +G++ + Sbjct: 857 MKDVMDNALIMKVPLSVSMKTGKSLYET 884 >UniRef50_C4GAN0 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GAN0_9FIRM Length = 910 Score = 917 bits (2371), Expect = 0.0, Method: Composition-based stats. Identities = 331/930 (35%), Positives = 501/930 (53%), Gaps = 32/930 (3%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 Q+ L+L+DG S L RA++ P LTNS G+ T A+YG LN+L + + KP H V FD Sbjct: 4 QSKLLLIDGHSILNRAFYGLPDLTNSKGQHTNAVYGFLNILFKTMEEEKPDHLTVAFDLS 63 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 TFR +F YK R PM +LR Q+ + M+ AMG+ L+ G+EADD++GT+++ Sbjct: 64 APTFRHRMFADYKGTRKPMAAELREQVPMIKEMLAAMGICLVTKEGLEADDLLGTMSKIG 123 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNT------ILGPEEVVNKYGVPPELIIDF 179 E AG V I +GD+D+ QL T + ++ T ++V Y V P ID Sbjct: 124 EAAGMDVTILSGDRDLLQLATDKVKIMIPKTKKGGTETESYYAKDVRETYQVSPTEFIDV 183 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 AL GD++DNIPGVPG+GEKTA ++ G ++ + E + A + Sbjct: 184 KALWGDTADNIPGVPGIGEKTAINIIAAYGSIEAAHEHAEDLK------PPRAARNIVDF 237 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 + A LS LATI +++ ++ ++ L K + FK + + Sbjct: 238 WDQARLSKTLATIDVHAKIDYDLAAAQIGNIFTDDAYRLCKDWGFKNILLRFDKESVDRE 297 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 + + TS + S + ++ A+ + A E Sbjct: 298 EKDLTSRFSHLTSRTAFEEMIERAGQSQETWIG-AGLFLKDHSAARAGQIRALAISFEGK 356 Query: 360 SLDNISANLVGLSFAIEPGVAAYIPV-AHDYLDAPDQISRERALELLKPLLEDEKALKVG 418 + FA A + + + D + + L L D Sbjct: 357 AF-----------FAEADTEARQLSLFGSEADDGSGDLIQSTDLRRGLQALADAGKNLAF 405 Query: 419 QNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAG 478 +LK L+ RG +FD + +Y+L+ ++ + + +A L ++ E G Sbjct: 406 LDLKE---ALSQLSFSDRGRSFDLQVAAYLLDPLSSSYPTEDIARDQLALSIPSYSEFFG 462 Query: 479 KGK-NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVL 537 K K +Q+ + +E YA A V + K+ L + +G ++E +E+PLV L Sbjct: 463 KKKADQIWEDPEEVEHRMHYACYQAYVASRAPQKLLKRL-EEQGMRALYEEVELPLVYTL 521 Query: 538 SRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIK 597 +E G+ ++ + L ++ ++L R+ ELE+ + AGE FN++S KQL +LF + G+ Sbjct: 522 YDMETAGIAVEKEALKSYGDQLVGRINELEEGIYREAGETFNINSPKQLGEVLFGQLGLP 581 Query: 598 PLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHT 657 +KT G ST+ +VL+ LA++Y + + +LE+R L KLKSTY D L +I GR+H+ Sbjct: 582 GARKTKTG-YSTAADVLDPLAVNYQIVRDVLEFRQLTKLKSTYADGLAKVI-ADDGRIHS 639 Query: 658 SYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHL 717 S+ Q VTATGRLSST+PNLQNIP+R E G+ IR+ F A E V V +DYSQIELR++AHL Sbjct: 640 SFQQTVTATGRLSSTEPNLQNIPIRMELGKEIRRVFPAMEGCVFVDSDYSQIELRVLAHL 699 Query: 718 SRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQL 777 S+D L+ A+ +GKDIHRATA+ VF P E VT +QR +AKA+NFG++YG+SAFGLA+ L Sbjct: 700 SQDPKLIEAYRQGKDIHRATASLVFHTPFEEVTDQQRSNAKAVNFGIVYGISAFGLAKDL 759 Query: 778 NIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRA 837 I R+EAQ+Y+D YF YP + +Y++ A+++GY TL GRR +P++K+SN +R Sbjct: 760 GISREEAQEYIDGYFAAYPRLHDYLDGLVEFARKEGYAVTLFGRRRPVPELKNSNFMQRQ 819 Query: 838 AAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVA 897 ER A+NAP+QGTAADIIK AM+ V L E R R+I+ VHDEL+ E + + V Sbjct: 820 FGERVAMNAPVQGTAADIIKIAMVRVHDRLAKEGLRSRLILTVHDELLVETFEQEEQEVR 879 Query: 898 KQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 + + Q M +L V L ++ SG NW A Sbjct: 880 EILDQEMRGAAQLSVELEIDTHSGRNWYDA 909 >UniRef50_B1YKA1 DNA polymerase I n=3 Tax=Bacilli RepID=B1YKA1_EXIS2 Length = 865 Score = 914 bits (2362), Expect = 0.0, Method: Composition-based stats. Identities = 338/930 (36%), Positives = 500/930 (53%), Gaps = 72/930 (7%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + +N L+L+DG+S YRA+ A PP+T++ G T A YG ML L+ + +PTH V FD Sbjct: 1 MMENKLLLIDGNSLTYRAFFALPPMTDAQGRNTNAAYGFTMMLLKLLEEEQPTHMLVAFD 60 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 A +TFR ++++ YK R P +LR Q + + +A+G+ ++ + EADD+IGTLA+ Sbjct: 61 ASSETFRHDVYQEYKGSREKTPSELREQFPIVRDICEALGIQMMELHRYEADDLIGTLAQ 120 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI----LGPEEVVNKYG-VPPELIID 178 + I TGDKD+ QLVT + ++ T + E YG + P +ID Sbjct: 121 TMPA--DRIRIVTGDKDLLQLVTSQVEVLITKRGITDVLCMTEELFAETYGGLKPIQMID 178 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 LMGD SDNIPGVPG+GEKTA L+ G ++ LY E + G K+ Sbjct: 179 LKGLMGDKSDNIPGVPGIGEKTAIKLISAYGSVEGLYEHVEDLKG-------KQKEKVVA 231 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 N+E+A LS +LATIK DV L++T + L++ + LF+ FK T Sbjct: 232 NEELARLSKELATIKLDVPLDVTLDDLQISDVDTQVPYSLFQSLGFKSLTNRF------- 284 Query: 299 AKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTET 358 AP V N I E Sbjct: 285 ------------------APVVEEADKEQLNVQAITSLPE---------DVTDAVLVVEQ 317 Query: 359 DSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVG 418 D + +++G A + + + +D P + +E K+ Sbjct: 318 LREDYMEEDIIGFGIATPDQIYV---ASAELVDDP----------AFRDWIES-DHQKIC 363 Query: 419 QNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAG 478 + K L +G++L AFD +L + L +++G + S+A ++ E + G Sbjct: 364 LDAKQAAFALRKHGLKLT--AFDDLLLAGYLLNLSGGTTLASIAGHYM-LMAPNEEAVLG 420 Query: 479 KGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLS 538 KG +L + Y AE A + L K+ +L+ ++ ++E +E PL VL+ Sbjct: 421 KGAKRLAPAD---DVLHPYLAEKARMIELLFPKVKEELKANQQF-ELYETLERPLSGVLA 476 Query: 539 RIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKP 598 +E G+++D L +L RL +LE+ + GEEFN++S KQL ILFEK + Sbjct: 477 EMEWTGIRVDVGTLQEMQHDLAGRLHDLEQLIYGEVGEEFNINSPKQLGVILFEKMELPA 536 Query: 599 LKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTS 658 KKT G ST+ +VLE+L +P+ I+ YR L KL+STY + L +I + G++HT Sbjct: 537 FKKTKTG-YSTAADVLEKLRPLHPVIDHIMLYRELQKLQSTYVEGLQKVIK-EDGKIHTR 594 Query: 659 YHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIELRIMAHL 717 + Q + TGRLSS +PNLQNIPVR EEGR+IR+AF+ + + +ADYSQIELR+MAH+ Sbjct: 595 FAQTIAQTGRLSSVNPNLQNIPVRIEEGRKIRKAFVPSEPGWSLYAADYSQIELRVMAHM 654 Query: 718 SRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQL 777 S DK L+ AF + DIH TA+ VFG+ VT RR AKA+NFG+IYG+S +GL++ L Sbjct: 655 SEDKTLVQAFLDDADIHTQTASSVFGVAPNDVTGNMRRQAKAVNFGIIYGISDYGLSQNL 714 Query: 778 NIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRA 837 NI RKEAQ ++D YFE +P + +M+ +A+ G+VETL RR +PDI S N R Sbjct: 715 NISRKEAQDFIDRYFELFPQIKLFMDAAIEKARMNGFVETLMNRRRNIPDINSKNFNLRG 774 Query: 838 AAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVA 897 AER AIN P+QG+AADIIK+AM+ V A L+ R R+++QVHDEL+FE +++DA+ Sbjct: 775 FAERTAINTPIQGSAADIIKKAMLDVHAALEQSPLRARLLLQVHDELIFEAPDEELDALK 834 Query: 898 KQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 + Q ME +L VPL V+ +G +W + Sbjct: 835 TLVKQAMEQTVQLSVPLRVDGDAGHSWYET 864 >UniRef50_D1BM52 DNA polymerase I n=6 Tax=Veillonellaceae RepID=D1BM52_VEIPT Length = 873 Score = 914 bits (2362), Expect = 0.0, Method: Composition-based stats. Identities = 354/927 (38%), Positives = 508/927 (54%), Gaps = 66/927 (7%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L+++DGSS L+RA+ A PPL ++ G PT A+YG L ML L + P + AV FD Sbjct: 2 KKLMIIDGSSLLFRAFFALPPLKSALGTPTNAVYGFLTMLIKLYEEINPDYIAVAFDKGR 61 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 +TFR E++ YK +RP P+DLR Q + ++KA+G+ ++ G E DD++G+L+++ Sbjct: 62 QTFRTEMYSEYKGNRPDAPEDLRPQFSLIQDVLKALGICVIEEEGFEGDDILGSLSKKFG 121 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPELIIDFLAL 182 V I TGD+D QLVT + + T + + + YG P+ +I+ AL Sbjct: 122 APEMAVQIITGDRDNLQLVTEHSHVFLTKKGISDMLEVTLDNMEELYGYGPDKVIEMKAL 181 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 MGDSSDNIPGVPGVGEKTA L+ G L+++Y E I+G K + +L +NKE+ Sbjct: 182 MGDSSDNIPGVPGVGEKTALKLITEYGNLESVYEHIEDISG------KKLKERLVENKEL 235 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A+LS +LATIKTD+EL E VQ E+ LF+ F + T + +Q G Sbjct: 236 AFLSRELATIKTDMELSYKVEDF-VQNFHTSEVQPLFETLGFTKLTPRI-----VQVMGG 289 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 + AA S+ E++ + D K A K A D Sbjct: 290 EEAAFGDPGSLFAPQEEIS-----------LDDLADAKVLTADFYKDKTVAVHVILDGKT 338 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKV---GQ 419 Y+ + D + L+ K ++ + + G Sbjct: 339 PF-----------RTVTNTYLSNGDTIVKTDDTKAVLAVLQGAKAIVTTQTKEIIEAFGA 387 Query: 420 NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 ++ + + + D L +Y+L+ + L ER+ Sbjct: 388 DVPAEISLF---NADKTARVHDMSLIAYLLDPTRTNYGYLYLTERF-------------- 430 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 + IA L ++ + + + +++E IE+PL+ L Sbjct: 431 -----SVPSIASGSVDVECVSMVKALLAMNEA-ACESARREELWSLYETIELPLIHTLVV 484 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 +E+NG+ ID + L + LA+++++ +E+AGE FN++S KQL ILFEK + + Sbjct: 485 MEKNGIYIDTEKLAETTTRFKEELAQVQQEIYELAGENFNINSPKQLGVILFEKMNLPII 544 Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 KKT G ST EVL+ L + P+ + IL YR +AKL STY + L ++IN KT R+HT++ Sbjct: 545 KKTKTG-YSTDAEVLDMLRHESPIVEKILAYRSVAKLVSTYCEGLAVLINDKTRRIHTTF 603 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY-VIVSADYSQIELRIMAHLS 718 +Q VTATGRLSS+DPNLQNIPVR E+GR IR F Y +VSADYSQIELRI+AHLS Sbjct: 604 NQMVTATGRLSSSDPNLQNIPVRTEKGREIRALFYPGAGYDTLVSADYSQIELRILAHLS 663 Query: 719 RDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLN 778 D+ L+ AF EGKDIHR TAAEV G + VTSE+R AKAINFG+IYG+S FGL+R L Sbjct: 664 GDEALIKAFVEGKDIHRFTAAEVLGKAQDDVTSEERSHAKAINFGIIYGISDFGLSRDLG 723 Query: 779 IPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAA 838 I R EA+ Y+DLYF RYP V EYM+R +A E G V T+ GR+ LPDI S N RR+ Sbjct: 724 ITRGEAKNYIDLYFSRYPKVKEYMDRMVQEAHETGKVRTMFGRQRELPDINSRNFNRRSF 783 Query: 839 AERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAK 898 AER A+N P+QGTAADIIK AM ++ L+ + + R+++QVHDELV EV +++A+ + Sbjct: 784 AERTAMNTPIQGTAADIIKLAMNQMEQKLEEQNFKSRLLLQVHDELVLEVVNSELEAIEE 843 Query: 899 QIHQLMENCTRLDVPLLVEVGSGENWD 925 + M++ L VPL+V+V ENW Sbjct: 844 LLRNTMQSVVELQVPLIVDVHHAENWA 870 >UniRef50_C5RBK8 DNA polymerase I n=9 Tax=Lactobacillales RepID=C5RBK8_WEIPA Length = 931 Score = 913 bits (2361), Expect = 0.0, Method: Composition-based stats. Identities = 344/935 (36%), Positives = 507/935 (54%), Gaps = 48/935 (5%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPP----LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAA 59 + + L+L+DG+S +RA++A N G T A+ G N+L +I + P A Sbjct: 33 MAKPTLLLIDGNSLAFRAFYALINQVDRFVNHEGLHTNALVGFNNLLDGIIDPFNPDLAL 92 Query: 60 VVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIG 119 V +DA TFR F++YK +R P +L Q EPL MV+ G+ + G EADD+IG Sbjct: 93 VAWDAGKTTFRTGKFDNYKGNRDNTPQELVEQFEPLRKMVELHGIKSYELPGFEADDIIG 152 Query: 120 TLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKY-GVPPE 174 T+AR E+ G V I TGD+DM QLV+ +IT+ T P + Y G+ P+ Sbjct: 153 TMARLGEENGYSVTIVTGDRDMTQLVSDDITVWVTKKGISEIDHYTPAMIAELYDGLEPK 212 Query: 175 LIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAA 234 I+D L GD+SDN PGV G+G KTA L++ + +Y + +++ A Sbjct: 213 QIVDIKGLQGDTSDNYPGVAGIGPKTALKLIKQYHSIPEMYEQIDEMK------ASKQKE 266 Query: 235 KLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAG 294 KL K+ A LS LA I TD + ++ L P E ++ ++ +FK + Sbjct: 267 KLVNGKQDAMLSRDLAKILTDAPVTISLSDLNYHGPDYENIIPFYQHLDFKAQLVKLANQ 326 Query: 295 KWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAF 354 + T A+ T +S ++ LK +F Sbjct: 327 GY-------TVPTSGHTKDAEFDINNTTLDVSAITPASLAHVSQLK---------DTVSF 370 Query: 355 DTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKA 414 E D+ + AN +G + D A I +K +LED Sbjct: 371 YLELDNENYHIANPIGFVIGNQA----------DGYFASRDIDLLTQNSPVKRILEDSTI 420 Query: 415 LKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFE 474 LK N K L GI L+G++FD +L SY+L++ +D+ +LA + +T E Sbjct: 421 LKNVFNAKELYVSLKRLGIALKGVSFDLLLVSYLLDTNDNNNDLGALAHDNDYYAVMTDE 480 Query: 475 EIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLV 534 E+ GKG A + + A L + L H+ ++E+IE+PL Sbjct: 481 EVYGKGAKFAIPAADA--DFFEHLGRKAMAINLLREPLLDRLLSHE-QTKLYEDIELPLT 537 Query: 535 PVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQ 594 +L+ +E G+ +D + L +LT RL+ELE+K ++ AG EFN+ S KQL +LFE+ Sbjct: 538 KILADMESTGITVDSEQLLQMRSKLTERLSELEQKIYQQAGHEFNIQSPKQLGVVLFEEM 597 Query: 595 GIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGR 654 P+KKT G STS EVLE++ D P+ + IL YR +AK++STY + L +I+ + Sbjct: 598 KYTPIKKTKTG-YSTSVEVLEKM-GDVPIVESILAYRQVAKIQSTYVEGLLRVIHGSDSK 655 Query: 655 VHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIELRI 713 VHT Y Q +T TGRLSS DPNLQNIPVR EEGR+IR+AF+ D+ I+SADYSQIELR+ Sbjct: 656 VHTRYLQTLTQTGRLSSVDPNLQNIPVRIEEGRQIRKAFVPSHSDWQILSADYSQIELRV 715 Query: 714 MAHLSRDKGLLTAFAEGKDIHRATAAEVFGL-PLETVTSEQRRSAKAINFGLIYGMSAFG 772 +AH++ DK L AF G+DIH ATA +FG+ E V RR AKA+NFG++YG+S FG Sbjct: 716 LAHITGDKNLQAAFINGEDIHAATARRIFGIKDDEPVEGNVRRQAKAVNFGIVYGISDFG 775 Query: 773 LARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSN 832 L++ + + RKEA+ ++ YF++YP V ++ + A A+E GYVET+ RR YLPDIK+ Sbjct: 776 LSKNIGVSRKEAKAIIETYFDQYPDVKKWSDDIIASARETGYVETIAHRRRYLPDIKAKR 835 Query: 833 GARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDD 892 R+ AER A+N+P+QG+AADIIK AMI V A ++ + M++QVHDEL+FE + Sbjct: 836 FNARSFAERTAMNSPIQGSAADIIKIAMIKVQAAIEQAGMQAHMLLQVHDELIFEAPASE 895 Query: 893 VDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 + + K + ++M++ +LDVPLLV G +W A Sbjct: 896 MADLEKLVTKVMDSAVKLDVPLLVSSHVGASWYDA 930 >UniRef50_B2TNM6 DNA polymerase I n=7 Tax=Clostridiales RepID=B2TNM6_CLOBB Length = 871 Score = 911 bits (2355), Expect = 0.0, Method: Composition-based stats. Identities = 324/926 (34%), Positives = 493/926 (53%), Gaps = 62/926 (6%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L+++D +S + RA++A PPLTN G T A+YG NML + + P + FD K Sbjct: 2 KRLLILDSNSLMNRAFYALPPLTNDDGVNTNAIYGFTNMLFKMKDEINPDNIIATFDKKS 61 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 TFR + + YK+ R MP +L Q + ++K MG+ + G EADD+IGT+++ E Sbjct: 62 PTFRHKEYSEYKAGRKKMPPELGEQFPIIKELLKYMGIKTFEIDGFEADDIIGTISKFGE 121 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPELIIDFLAL 182 + V I TGDKD QL + ++ T I + ++++ + P ID L Sbjct: 122 ENDMEVYIVTGDKDALQLASEKTKVVITKKGVTETAIYDYKAFMDEFEITPTQFIDVKGL 181 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 MGD SDNIPGVPGVGEKTA L++ G L+ + +I+G K + LE N E Sbjct: 182 MGDKSDNIPGVPGVGEKTAFKLIKEYGTLEDVLKHIPEISG------KKLKENLENNMEQ 235 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A S +LATI +V L++ + AD L+ Sbjct: 236 AIFSKKLATIMREVPLDINLSDI---------------------ENADEVNLVELKKLSK 274 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 K + + E I+ I E ++ + ++ T D+ Sbjct: 275 NLKLKSVLSKYDLDNNEAELQEIANIEISKIETIEEMEEVLLSIKDRSYI-LFTLNDASK 333 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 + L L E G + I +RE+AL LL+ +ED+ KV + K Sbjct: 334 YSTIELEYLILG-EEGRSHVIDFK-----LVSMSNREKALNLLRTFMEDKTVKKVIHDSK 387 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 L Y I+++G FDT + +Y+++S +++ L R+L+ + + Sbjct: 388 NLITFLNKYDIDIQGFDFDTAIAAYLIDSSKANYEVFDLINRFLEKDIKSDCDDLK---- 443 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 A + +L+ K+ L K ++ +E PL+ VLS +E Sbjct: 444 ----------------AICSSYLTKLYEKLKERLHKED-MDELYYKVEHPLIYVLSSMES 486 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 G KI+ L + ++ + EK+ +E+A EEFN+SS KQL ILFEK + +KKT Sbjct: 487 IGFKINKDKLEELRIKFKEQIEKTEKEIYELADEEFNVSSPKQLGKILFEKLDLPVIKKT 546 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST++EVLE+L +P+ ++ YR + K+ STY + L +I+ G +H++++Q Sbjct: 547 KTG-YSTNQEVLEKLIDKHPIITKVMYYRQITKINSTYVEGLKNVID-IDGCIHSNFNQT 604 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE-DYVIVSADYSQIELRIMAHLSRDK 721 VT TGRLSST+PNLQNIP++ E G+ IR+ FI + D +++S DYSQIELR++AH++ DK Sbjct: 605 VTTTGRLSSTEPNLQNIPIKYEMGKEIRKVFIPQDSDDILISCDYSQIELRVLAHVADDK 664 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 ++ AF DIH TA+EVF +P++ VTS R +AKA+NFG++YG+S F LA+ L I + Sbjct: 665 NMIDAFEHHSDIHTKTASEVFKVPVDEVTSTMRSNAKAVNFGIVYGISDFSLAQDLKITK 724 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 KEA +YM +YFERYP + EY+ AKE+GYV T+ RR ++P+IKSSN +A ER Sbjct: 725 KEAAEYMAIYFERYPKIKEYLNYVSEYAKEKGYVLTILNRRRFIPEIKSSNKIVKALGER 784 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 A+NAP+QG+AADIIK AM+ V L+ + +I+QVHDEL+ V KD+ D V + + Sbjct: 785 LAMNAPIQGSAADIIKLAMVNVYNKLREKNLNSELILQVHDELILNVKKDEFDIVKQLVI 844 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQA 927 + ME +L+V L V++ G W A Sbjct: 845 EEMEKAIKLNVALDVDLKYGYTWYDA 870 >UniRef50_O51498 DNA polymerase I n=20 Tax=Borrelia RepID=DPO1_BORBU Length = 908 Score = 906 bits (2343), Expect = 0.0, Method: Composition-based stats. Identities = 322/927 (34%), Positives = 513/927 (55%), Gaps = 25/927 (2%) Query: 7 NPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 L L+D + ++R YH PL N+ GE A G L +I + P H + FD+ Sbjct: 2 KELYLIDALNIIFRNYHVMKNYPLLNTQGENVNAFIGFFKTLFFIIKEKNPEHLIITFDS 61 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 + TFR + + YK+ R PDDL QI + + +P+ + G EADD++ + A++ Sbjct: 62 EVPTFRKQKYPSYKATRDLPPDDLIPQIGWIKEGLLKAKIPIFEMEGYEADDLLASFAKK 121 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTIL--GPEEVVNKYGVPPELIIDFLAL 182 A K I + DKD+ Q ++ + ++ N+ + E V K+GV I D+LA+ Sbjct: 122 AAKNNYLTYIISPDKDLLQTMSEYVKILKIENNSFIEMDNEYVTKKFGVNSFQIKDYLAI 181 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 +GD SDNIPG+ G+G K A LL+ LD +Y+ E I K L + KE Sbjct: 182 VGDRSDNIPGIKGIGAKGAANLLREFKTLDGIYSNLEII-------NKKHRELLIKEKEN 234 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A+LSY+L +++ ++++ E ++ +EE++ LF+K+ + Q K Sbjct: 235 AFLSYELVSLEENLKIP-EIENFALKNF-SEEIISLFEKHSAIALIKTYKKDILKQEKEN 292 Query: 303 KPAAK-PQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 ++ + ++ Y +I + L I L+KA + DTET SL Sbjct: 293 ADQKSLFKQEPTTNSLDDINTIDTENVKYRSITTKIELDDLIESLKKAKYISIDTETSSL 352 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 D +A L+G+S + + YIP+ I + ++ L E +GQN Sbjct: 353 DTYTAKLIGISISFKEFEGYYIPIEAKGKIY---IEKNYIIQKFNNLFES-NPKIIGQNY 408 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 K+D IL N G FDTM+ +Y++++ + +D LAE++L HK I +E++ K Sbjct: 409 KFDYKILKNNGFNPIPPYFDTMIAAYLIDTN-SKVSLDFLAEKYLMHKNIKYEDVIQKND 467 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 N F I+LE A Y++EDAD+T +L K + IEMP V+ +E Sbjct: 468 N---FANISLEMATSYSSEDADITFRLFNIFTKK-LKEDKLDKLMHEIEMPFNKVIIEME 523 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 NG+ +D + L + +EL L +E + + G +FNL+S KQ+ ILFEK +K +K Sbjct: 524 ENGIYLDKEYLKEYGKELGKELEAIENEIIKSIGIDFNLNSPKQMHEILFEKLNLKLPEK 583 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 ST +VLE L + + +++YR +AKLKSTYTD L +IN KT R+HTS+ Q Sbjct: 584 MK--KDSTDIKVLESLREQHESIENLIKYRQIAKLKSTYTDNLIELINYKTNRLHTSFIQ 641 Query: 662 AVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDK 721 TATGR++S +PNLQNIP+++E+GR+IR+AF + +SADYSQIEL I+AHLS+D+ Sbjct: 642 TKTATGRITSINPNLQNIPIKDEKGRKIRKAFKPENGNIFISADYSQIELAILAHLSQDE 701 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 L+ AF KDIH TA+++F + + +T RR AK+INFG+IY MS F LA++L I + Sbjct: 702 VLIKAFENNKDIHTETASKLFKIEEKEITPNLRRIAKSINFGIIYRMSDFRLAKELGITK 761 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 +EA+ +++ YF+ YP + E++ + GY ET+ RR Y+ +I S+N R+AAER Sbjct: 762 EEAKGFINSYFDSYPKIKEFIINQINFVRNAGYSETILKRRRYIKEINSNNYLERSAAER 821 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 AIN+ +QG+AADI+K AM+ V ++++ ++++QVHDE++ E ++ + V K + Sbjct: 822 IAINSIIQGSAADIMKIAMVKVFNEFKSKKMESKILLQVHDEMLIESPIEEENEVKKILK 881 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQAH 928 +ME L++PL + +G++W + H Sbjct: 882 IMMETAYTLNLPLRANIETGKSWGEIH 908 >UniRef50_Q1JIU7 DNA polymerase I n=14 Tax=Streptococcus RepID=Q1JIU7_STRPD Length = 880 Score = 904 bits (2337), Expect = 0.0, Method: Composition-based stats. Identities = 336/937 (35%), Positives = 501/937 (53%), Gaps = 74/937 (7%) Query: 5 PQNPLILVDGSSYLYRAYHAFPP----LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 +N L+L+DGSS +RA+ A N +G T A+YG ML ++ + +PTH V Sbjct: 3 NKNKLLLIDGSSVAFRAFFALYNQIDRFKNHSGLHTNAIYGFHLMLDHMMKRVQPTHVLV 62 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 FDA TFR E++ YK+ R PD+ R Q + M+ A+G+ + EADD+IGT Sbjct: 63 AFDAGKTTFRTEMYADYKAGRAKTPDEFREQFPYIREMLTALGIAYYELEHYEADDIIGT 122 Query: 121 LAREAEKAG--RPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPE 174 L + AE+ V I +GDKD+ QL N + + P ++ K G+ P Sbjct: 123 LDKMAERTEVPFDVTIVSGDKDLIQLTDENTVVEISKKGVAEFEEFTPAYLMEKMGLTPN 182 Query: 175 LIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAA 234 ID ALMGD SDNIPGV +GEKT LL G L+ +Y + A M Sbjct: 183 QFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEFGSLEGIYEHIDGFK------ASKMKE 236 Query: 235 KLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAG 294 L +++ A+LS LATI T + + + + P L + + +F + + Sbjct: 237 NLINDRDQAFLSKTLATINTASPITIGLDDIVYNGPDVASLSQFYDEMDFVQLKKGL--- 293 Query: 295 KWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAF 354 + PQE A EVT + I F Sbjct: 294 ---------ASQMPQEPVAAISYQEVTNVSADLFSAEDI--------------------F 324 Query: 355 DTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKA 414 ET + ++G ++ + A + D+ Q+ ++ Sbjct: 325 YFETLRDNYHREAIIGFAWGHGEQIYASTDLGLLATDSFKQVFQK--------------- 369 Query: 415 LKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFE 474 + K + +L++ GIEL ++D L +Y+L S +++ ++A + + Sbjct: 370 PIATYDFKRSKVLLSHLGIELVAPSYDARLANYLL-STVEDNELSTIARIFTDISLEEDD 428 Query: 475 EIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLV 534 + GKG + ++ + + A V L +M L H+ ++++NIE+PL Sbjct: 429 TVYGKGAKRAVPDK---DVLLEHLARKVKVLLDSKSQMLDKLTAHEQL-DLYQNIELPLA 484 Query: 535 PVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQ 594 VL+++E G+K++ L + +E+ + + L ++ +++AG+EFN++S KQL +ILFEK Sbjct: 485 NVLAKMEIEGIKVNRATLQDMAEQNKVIIEALTQEIYDMAGQEFNINSPKQLGSILFEKM 544 Query: 595 GIKP--LKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKT 652 + KKT G ST+ +VLE LA P+ IL+YR + KL+STY L I Sbjct: 545 QLPLEMTKKTKTG-YSTAVDVLERLAPIAPIVAKILDYRQITKLQSTYVIGLQDYILA-D 602 Query: 653 GRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIEL 711 G++HT Y Q +T TGRLSS DPNLQNIP+R E+GR IR+AF ED V++S+DYSQIEL Sbjct: 603 GKIHTRYVQDLTQTGRLSSVDPNLQNIPIRLEQGRLIRKAFTPSHEDAVLLSSDYSQIEL 662 Query: 712 RIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLE-TVTSEQRRSAKAINFGLIYGMSA 770 R++AH+S D+ L+ AF EG DIH +TA VFG+ VT+ RR+AKA+NFG++YG+S Sbjct: 663 RVLAHISGDEHLIAAFNEGADIHTSTAMRVFGIDKAADVTANDRRNAKAVNFGIVYGISD 722 Query: 771 FGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKS 830 FGL+ L I RK+A+ Y+D YFERYPG+ YME +AK++GYVETL RR LPDI S Sbjct: 723 FGLSNNLGITRKQAKSYIDTYFERYPGIKAYMENVVREAKDKGYVETLFKRRRELPDINS 782 Query: 831 SNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHK 890 N R+ AER AIN+P+QG+AADI+K AMI +D LQA R +M++QVHDE+V EV Sbjct: 783 RNFNVRSFAERTAINSPIQGSAADILKIAMINLDKALQAGGFRAKMLLQVHDEIVLEVPN 842 Query: 891 DDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 D++ A+ K + ME L VPL V+ +G++W +A Sbjct: 843 DELTAIKKLVKDTMEAAVDLAVPLCVDESTGQSWYEA 879 >UniRef50_B9L837 DNA polymerase I n=2 Tax=Nautiliaceae RepID=B9L837_NAUPA Length = 872 Score = 902 bits (2332), Expect = 0.0, Method: Composition-based stats. Identities = 343/924 (37%), Positives = 518/924 (56%), Gaps = 60/924 (6%) Query: 8 PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 L ++D +L+R ++A PPL + G PTG + G LN + SL ++ + D+K K Sbjct: 2 TLTIIDTFGFLFRNFYALPPLKSKKGFPTGMITGFLNFVASLGRDFETDYIVFTLDSKEK 61 Query: 68 -TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 TFR E+F+ YK++RP P+DL+ Q+ ++ MG +L + G E+DD+I +LA+ A Sbjct: 62 DTFRKEIFKDYKANRPEAPEDLKTQLPVAIELINEMGFKMLEIPGYESDDIIASLAKLAA 121 Query: 127 KAGRPVLISTGDKDMAQLV-TPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185 G V I + DKDM QL+ I + + + + + + K+GV P+ I+F AL+GD Sbjct: 122 SQGIKVKIVSHDKDMYQLIDDDKIVIFDPIKKVEINEAKCIEKFGVHPKDFINFQALVGD 181 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 SSDNIPGV GVG KTA L+ L+ LY ++I G + KL +KE A+L Sbjct: 182 SSDNIPGVKGVGVKTAAKLINQYKTLENLYDHIDEIKG-------ALQKKLLADKENAFL 234 Query: 246 SYQLATIKTDVELELTCEQLEVQQPAAE-ELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304 S +L T+KTD+ + E+ + + ++ + V+ Sbjct: 235 SRELVTLKTDLFDNINLEEFKYPEINPILKVADKLIDLDITSILERVKKDGL-------- 286 Query: 305 AAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNI 364 + V I +E+ L I K+E + AFDTETDSL+ Sbjct: 287 -----------YVKTKMPDNQVKFDAVLIENEKELFEIIDKIED-KIVAFDTETDSLE-- 332 Query: 365 SANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYD 424 + N+VG SFA E A Y+P+ H YL DQI + AL+ ++ +L +G NLK+D Sbjct: 333 NPNIVGFSFAYEKNKAYYVPINHFYLGVTDQIPEKTALKAIQKIL---DKKVIGHNLKFD 389 Query: 425 RGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQL 484 +L YG+E+ DTM+ ++IL+ +DS+A+R+L H+ I F+E+ GK KN Sbjct: 390 FKMLKKYGLEIPTPHADTMILAWILDPD-SPVGLDSVAKRYLDHQNIKFKEVIGKRKN-- 446 Query: 485 TFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNG 544 F+++ ++EA +YAAEDA ++L+L+ + L + ENIEMP + +L IE G Sbjct: 447 -FSEVDIQEAAKYAAEDALISLKLYEILKEKLWEE--VKWDIENIEMPFINLLIDIESQG 503 Query: 545 VKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPG 604 +K+D + + E T +L L ++ + AG EFN+ STKQL ILFE + +KT Sbjct: 504 IKLDIEYMQKLQTETTEKLENLTQEIYRYAGSEFNIKSTKQLAHILFEVLKLPVKRKTKT 563 Query: 605 GAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPK-TGRVHTSYHQAV 663 G ST E+VL L +P+ + +LEYR L KL STY L +++T++ Q Sbjct: 564 G-YSTDEKVLTSLKGTHPIIEKLLEYRKLDKLLSTYIIPLQEYAKKDPNHKIYTNFLQTG 622 Query: 664 TATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGL 723 TATGRLSS +PNLQNIP + IR AF+A + VS DYSQIELR++AH S+D+ L Sbjct: 623 TATGRLSSKNPNLQNIPTSTD--INIRDAFVAEK--EFVSLDYSQIELRLLAHFSKDEHL 678 Query: 724 LTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKE 783 + AF E KDIH TA ++FG E E R AK+INFGLIYGM L+ +N+ KE Sbjct: 679 INAFLEDKDIHLETAVKIFG---ENRAKEYRPVAKSINFGLIYGMGPKKLSETINVSTKE 735 Query: 784 AQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAA 843 A+++++ YF +P V ++E T+ +A+E+GYVETL RR + D ++N A ER A Sbjct: 736 AKEFIEKYFASFPTVKTFLENTKIEAREKGYVETLLKRRRFF-DFAAANARTLANFEREA 794 Query: 844 INAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVH-KDDVDAVAKQIHQ 902 +N QG+AADIIK+AMI + P+ +M++Q+HDEL+FE+ +D+ + Sbjct: 795 VNTIFQGSAADIIKKAMIEIKQRF----PKAKMLLQIHDELIFEIDSRDEAYEY----KK 846 Query: 903 LMENCTRLDVPLLVEVGSGENWDQ 926 +M+N +L+VPL V + G+ W + Sbjct: 847 IMQNVFKLEVPLKVGISFGKRWGE 870 >UniRef50_C7MNN5 DNA polymerase I n=2 Tax=Coriobacteriaceae RepID=C7MNN5_CRYCD Length = 885 Score = 902 bits (2332), Expect = 0.0, Method: Composition-based stats. Identities = 358/939 (38%), Positives = 508/939 (54%), Gaps = 73/939 (7%) Query: 7 NPLILVDGSSYLYRAYHAFPP-LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 + ++DG+S ++RAYHA PP + G PT A++G L+M I P FD Sbjct: 3 KTIAVIDGNSLMHRAYHAVPPTMNAPDGTPTNAVFGFLSMFLKFIDIAHPDAVVCAFDVG 62 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 R E YK+ RPPM DDLR Q + ++ AMG+P + V G E DD++GT+A Sbjct: 63 KPQHRIAALEQYKAQRPPMDDDLRVQFPVVEQVLAAMGIPAVKVPGWEGDDILGTIAARG 122 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLA 181 + AG L+ TGDKD QL + + ++NT I P V KYGV PE I DFL Sbjct: 123 DAAGYDTLLVTGDKDACQLASDHTRIVNTKRGISDVVIFDPAGVEEKYGVSPEQIPDFLG 182 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGDSSDNIPGVPG+G KTA LLQ G ++ +Y +++ G + N++ Sbjct: 183 LMGDSSDNIPGVPGIGPKTAAKLLQRFGSIEGIYEHLDELKG-------KQQESIRDNRD 235 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK- 300 A+LS +A IK D++ EL E L E + F+K + V + +A Sbjct: 236 AAFLSRDVAIIKCDLDFELDLENLTFPSFNEEAVTAAFEKLGMRAHLGRVLSLIGEEAPV 295 Query: 301 GAKPAAKPQETSVADEAPEVTATVISYDN----------YVTILDEETLKAWIAKLEKAP 350 G A K Q+ + DEA + A V+ TI D+E L Sbjct: 296 GHVVALKWQDYTRNDEAYNLIAQVLDDSVECTGAERIGMAFTISDQENLFES----GLKL 351 Query: 351 VFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLE 410 A DT ++ A + L FA+ + I V + + AL+ + P Sbjct: 352 AVACDTGCALIEGDRARAL-LGFAVGRSSSLRIAV----------LDAKEALQCVYPPDT 400 Query: 411 DEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKT 470 E+ + D + FD L +Y+L+S R+D LAE +L+ Sbjct: 401 AEEI----HIAEADLFAMN---------FFDVTLAAYVLDSSVSRYDFSYLAETYLEGAL 447 Query: 471 ITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIE 530 E+ + Q + ++ + D G V++ I+ Sbjct: 448 APVEDDDDRLVMQAACLRALIDPMSQALVAD-------------------GTKGVYDTID 488 Query: 531 MPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTIL 590 +PLVPVL+ +ER G +D L +A++ ++ +E+AGE+FN+ S +Q+ IL Sbjct: 489 LPLVPVLAHMERIGALLDTDTLQALGSRTAQNIADISERIYELAGEKFNIDSPQQVSHIL 548 Query: 591 FEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINP 650 F+ G+ P K+T G ST +VLE+L+ ++ LP +ILEYR LAK+ TY D LP + Sbjct: 549 FDVIGLPPRKRTSRG-YSTDAKVLEDLSSEHQLPGLILEYRELAKIMGTYIDALPKL-RG 606 Query: 651 KTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQI 709 GR+HTS+++ VT TGRLSS++PNLQNIPVR E GR IR+ FI +++ VSADYSQI Sbjct: 607 ADGRLHTSFNETVTTTGRLSSSNPNLQNIPVRTEFGRHIRECFIPLSPEHLFVSADYSQI 666 Query: 710 ELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMS 769 ELR++AHLS D L+ AF G D H ATAA VFG+P+E VT E R AKA+NFG++YG Sbjct: 667 ELRLLAHLSGDAHLIDAFRSGADFHSATAARVFGVPVEEVTPELRSRAKAVNFGIVYGQQ 726 Query: 770 AFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIK 829 AFGL++ L IP EAQ +D YF YP V Y++ AQA E+GY T+ GR+ ++P+++ Sbjct: 727 AFGLSQSLRIPFGEAQAMIDRYFTAYPVVRAYLDNIVAQAHEKGYALTMFGRKRHIPELR 786 Query: 830 SSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVH 889 + N +RA ER A+N PMQGTAADIIK+AM+ VDA L+ E P +M++QVHDEL V Sbjct: 787 AHNAQQRAFGERIAMNHPMQGTAADIIKKAMVEVDARLRHEFPNAKMMIQVHDELDLSVP 846 Query: 890 KDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 D V V+ + ++MEN LDVPL+V+V S +NW +AH Sbjct: 847 ADQVGEVSALLKEVMENVVELDVPLIVDVQSAKNWAEAH 885 >UniRef50_Q6MPP6 DNA polymerase I n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MPP6_BDEBA Length = 863 Score = 902 bits (2331), Expect = 0.0, Method: Composition-based stats. Identities = 352/922 (38%), Positives = 510/922 (55%), Gaps = 60/922 (6%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 + L+D S+ +RA++A L++ +G P A+YG L+M+ L+ + KP + +D K Sbjct: 2 KKIYLIDVSAMFFRAFYAIRALSSPSGVPVNAVYGFLSMMIKLLKEEKPEYLVFCYDRKE 61 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 +FR +++ YK+HR MPD+L QI + + +G+P V EADD+IGTL + + Sbjct: 62 PSFRKTMYDGYKAHRTEMPDELAQQIPYIKRLADLLGVPAFEVESFEADDIIGTLTKWSR 121 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDS 186 + G V I +GDKD QL+ +TL +TM E V K+GV P+ ID+LA++GD+ Sbjct: 122 RNGMEVFIVSGDKDFGQLIEDGVTLYDTMKGVRYNAEGVFEKWGVRPDQFIDYLAIVGDA 181 Query: 187 SDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLS 246 SDN+PGV GVGEK A LL+ ++ +Y +K+ +K++ KL +K+ A LS Sbjct: 182 SDNVPGVKGVGEKGAIKLLEQFKHVEDIYENIDKVE------SKSVREKLIASKDNALLS 235 Query: 247 YQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAA 306 +L TI DV + E +++ A+EL + FK + + A PAA Sbjct: 236 KKLVTISCDVPMPDDLEAYKLKPFKADELRAFLHELNFKSFEKSLFGTVDTTPAAAAPAA 295 Query: 307 KPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISA 366 + + I EE + + E Sbjct: 296 PAGPLIKTAAPSAPLSIADDVAPTIVIAKEERQFTEKSMTTR--------ELADFLAEHQ 347 Query: 367 NLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRG 426 +L G S + ++ QI + E L L + + G +LK Sbjct: 348 SLWGFS-----------DMRGVFIGTESQIIQVPDHEYLGKLTDTFQVQWHGYDLK---S 393 Query: 427 ILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTF 486 G + A+D+ L +Y+L + A+ + + ++A + Sbjct: 394 FWHKIGAKTPVAAWDSQLAAYVLKAGDTS----DFAKIYTRFMADVLPDLASPSQL---- 445 Query: 487 NQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVK 546 Y A+ T + LQ +G V++ +++PL VL +ER GV+ Sbjct: 446 ----------YNAQLNFAT-----TLKSQLQTVQG-EKVYQELDLPLARVLLSMERLGVR 489 Query: 547 IDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGA 606 ID +L SEEL +AE+EK+ HE AGE FN+ S KQL ILFEK G+ KKT G Sbjct: 490 IDKDLLAKQSEELAKDIAEIEKQIHEAAGESFNVGSPKQLGVILFEKLGLPAGKKTKTG- 548 Query: 607 PSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTAT 666 ST EEVL L L++P+ K++L++R ++KLKSTY D LP MI+PK RVHTS++QA+T T Sbjct: 549 YSTDEEVL--LGLEHPIAKLVLQWREMSKLKSTYVDALPTMIDPKDERVHTSFNQALTTT 606 Query: 667 GRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTA 726 GRLSST PNLQNIP+R G+++R+AFIA ++S DYSQIELRI+AH+S D L A Sbjct: 607 GRLSSTQPNLQNIPIRTARGQQVRKAFIAAPRMKLLSVDYSQIELRILAHISEDPNLCKA 666 Query: 727 FAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQK 786 FAE DIH ATAAEVFG+PL+ VT+E RRSAKA+NFG+ YG AFGLA L I R EA+ Sbjct: 667 FAEDLDIHAATAAEVFGVPLKDVTAEHRRSAKAVNFGIAYGQGAFGLAENLGISRTEAKD 726 Query: 787 YMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINA 846 ++ YF R+ V EY++ T A E+GYVETL GRR Y+ +++S N A + ERAAINA Sbjct: 727 IIERYFNRFKNVREYIDGTIKMAHEKGYVETLFGRRRYIDELQSKNMALKKFGERAAINA 786 Query: 847 PMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMEN 906 P+QGTA+D++K+AMI V E+ VRM++QVHDEL+FE ++++ + Q+ +MEN Sbjct: 787 PIQGTASDLVKKAMIEVF-----EKVPVRMLLQVHDELIFEDFEENLQKHSPQLVSIMEN 841 Query: 907 CTRLDVPLLVEVGSGENWDQAH 928 +L VPL V G NWD+AH Sbjct: 842 VMKLKVPLKVNYAIGNNWDEAH 863 >UniRef50_Q3AZ16 DNA polymerase A n=12 Tax=Chroococcales RepID=Q3AZ16_SYNS9 Length = 998 Score = 901 bits (2329), Expect = 0.0, Method: Composition-based stats. Identities = 365/1002 (36%), Positives = 517/1002 (51%), Gaps = 85/1002 (8%) Query: 3 QIPQNPLILVDGSSYLYRAYHAFPP-----LTNSAGEPTGAMYGVLNMLRSLIMQYKPTH 57 + + L+LVDG S +R+++AF L G PT YG L L +KP Sbjct: 4 AVTKPLLLLVDGHSLAFRSFYAFSKGGEGGLATKDGRPTSVTYGFLKSLLDTGKTFKPQG 63 Query: 58 AAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMV-KAMGLPLLAVSGVEADD 116 A+ FD TFR + +YK+HR P+ +E L ++ M LPL G EADD Sbjct: 64 VAIAFDTAEPTFRHKADTNYKAHRDVAPEVFFQDLEQLQQILSDQMKLPLCMAPGYEADD 123 Query: 117 VIGTLAREAEKAGRPVLISTGDKDMAQLVTP--NITLINTMTN--------TILGPEEVV 166 V+GTLA A AG V I +GD+D+ QLV +I ++ T++ + VV Sbjct: 124 VLGTLANRAADAGWGVRILSGDRDLFQLVDNSRDIAVLYMGGGPYAKGSGPTLIQEDGVV 183 Query: 167 NKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSF 226 +K GV P+ ++D AL GDSSDNIPGV GVG KTA LL+ LD +YA ++ Sbjct: 184 SKLGVMPDKVVDLKALTGDSSDNIPGVRGVGPKTAINLLKDNIDLDAVYATLAEVEAEGP 243 Query: 227 RGAKTMAA-----KLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKK 281 + ++ KL +++ AYLS LA I D+ L E L +QQ AE L + Sbjct: 244 KASRGAIKGALVGKLRSDRDNAYLSRMLAEILVDIPLPKDPE-LGLQQVDAEGLSDRLED 302 Query: 282 YEFKRWTADVEAGKWLQAKGAKPAAKPQETSVADE-----------------------AP 318 E V + G A E + + Sbjct: 303 LELNSLVRQVGGFVATFSTGGYGANASSEAEKTPKRSPAKTNPDSTSSIGSAAAPQQGSG 362 Query: 319 EVTATVISYDNYVTILDEETLKAWIAKLEK----APVFAFDTETDSLDNISANLVGLSFA 374 E I I E L+A + +L A DTET L+ A LVG+ Sbjct: 363 EAEVGAIPPLQPQLIESNEALQALVQRLMDCTDPKAPIAVDTETTDLNPFKAELVGVGVC 422 Query: 375 IEPGVAA--YIPVAHDYLDA------PDQISRERALELLKPLLEDEKALKVGQNLKYDRG 426 A YIP+ H P Q+ E L L P L + K QN KYDR Sbjct: 423 WGEANDALAYIPIGHKPPSELSEATPPQQLPLETVLMALSPWLASPQHPKALQNAKYDRL 482 Query: 427 ILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTF 486 IL +G+ L G+ DT+L Y+ ++ A +H +D ++ER + T+ ++ GK + TF Sbjct: 483 ILLRHGLTLNGVVIDTLLADYLRDAAA-KHGLDLMSEREFGFRPTTYGDLVGK---KQTF 538 Query: 487 NQIALEEAGRYAAEDADVTLQLHLKMWPDLQKH-KGPLNVFENIEMPLVPVLSRIERNGV 545 +A+E A Y D VT +L L++ LQ L + E +E PL PVL+++E G+ Sbjct: 539 ADVAIEPASLYCGMDVHVTRRLALQLRQTLQAMGPQLLPLLEGVEQPLEPVLAQMEATGI 598 Query: 546 KIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQ--GIKPLKKTP 603 +ID L S+EL L LE A ++A +FNL+S KQL +LF+ K ++T Sbjct: 599 RIDVPYLKTLSDELGSTLNRLETDAKQVAEVDFNLASPKQLGELLFDTLGLDRKKSRRTK 658 Query: 604 GGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAV 663 G ST VLE+L D+P+ ++LE+R L+KLKSTY D LP ++ +TGRVHT ++QAV Sbjct: 659 TG-FSTDATVLEKLENDHPVVPLVLEHRVLSKLKSTYVDALPQLVEAETGRVHTDFNQAV 717 Query: 664 TATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGL 723 TATGRLSS++PNLQNIPVR E RRIR+AF+ E + ++SADYSQIELRI+ HLS ++ L Sbjct: 718 TATGRLSSSNPNLQNIPVRTEYSRRIRKAFLPQEGWTLLSADYSQIELRILTHLSGEEVL 777 Query: 724 LTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKE 783 A++ G D+H TA + L + V++++RR K INFG+IYGM A AR+ + E Sbjct: 778 QEAYSTGDDVHALTARLL--LDKDDVSADERRLGKTINFGVIYGMGAQRFARETGVSSAE 835 Query: 784 AQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIK-------------- 829 A++++ Y +RYP V ++E A +GYVET+ GRR + Sbjct: 836 AKEFLTKYKQRYPKVFAFLELQERLALSRGYVETILGRRRPFHFDRNGLGRLLGKDPLEI 895 Query: 830 ----SSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELV 885 + G A RAA NAP+QG++ADIIK AM+ + A L ++ R+++QVHDELV Sbjct: 896 DLDVARRGGMEAQQLRAAANAPIQGSSADIIKVAMVQLQAVLLSQGIPARLLLQVHDELV 955 Query: 886 FEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 EV D +D + MEN +L VPL+VE G G +W +A Sbjct: 956 LEVAPDALDTTRNLVVNTMENAVKLSVPLVVETGVGRDWMEA 997 >UniRef50_D0LQ66 DNA polymerase I n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LQ66_HALO1 Length = 930 Score = 901 bits (2328), Expect = 0.0, Method: Composition-based stats. Identities = 355/938 (37%), Positives = 517/938 (55%), Gaps = 27/938 (2%) Query: 8 PLILVDGSSYLYRAYHAFPP-----LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 L ++DG Y+YRAY A L+ G PT A++ ML L + +P AVVF Sbjct: 3 RLHILDGHGYIYRAYFALAGPGSQRLSTKGGMPTAALFVYAQMLIRLFIDERPERIAVVF 62 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 D G+TFR+EL + YK+ R P+DL+ Q+ + +A+G P++ GVEADDVI TL Sbjct: 63 DPPGRTFRNELDDAYKATRRETPEDLKPQLPYFSKLTEALGWPVICEQGVEADDVIATLV 122 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLAL 182 A G V++ +GDKD+ QLV +T+I+++ + + V K+GVPP + D+LAL Sbjct: 123 GRARAQGWDVVVYSGDKDLMQLVDEGVTVIDSLRSIVYDAARVEKKFGVPPAKLRDYLAL 182 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLE--QNK 240 +GD SDN+PG+PGVG KTA LL +D + A E++ G M + + Sbjct: 183 VGDVSDNVPGMPGVGAKTAAKLLGSYDSIDGILAHNEELKG-------KMGERFRDPEAL 235 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 E S +L T+++DV + + L Q + LF++ EF+ + A + Sbjct: 236 ERLARSRELVTLRSDVATDAELDALVQQPWEGAQAEELFRELEFETLLERLSAARPDVPS 295 Query: 301 GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAP-----VFAFD 355 + AA A + +A + + + L A A Sbjct: 296 PSGDAAATGPKGNDANADDGSAASSARPAFAPQPTQVALDEAALAELLAAACAHRRVAVF 355 Query: 356 TETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKAL 415 E+D A +GL+ A Y+P+AH YL P Q S E L+ LL D Sbjct: 356 AESDGARPDRAIAIGLALAAGEAAPVYLPLAHRYLGVPAQWSALP--EALRALLADPAVE 413 Query: 416 KVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEE 475 V ++K +L L G+ DTML +Y+L G+ +++ +A + + T + Sbjct: 414 IVAHDVKSLARLLRTLDAPLAGVLGDTMLAAYLL-GQEGKLEVEDVAGAAVGAELPTRKS 472 Query: 476 IAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKG---PLNVFENIEMP 532 + G G++++ F + + A A A L ++ L+ G + + +E+P Sbjct: 473 LLGSGRSKIGFEAVDISAAAMRAGGAAAAVLASWPRLGEQLEHAGGDGALRKLHDELELP 532 Query: 533 LVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFE 592 L +L+ IE +G+ +D L ++EL +LA +E++ +E+AGEEFNL S KQL +LFE Sbjct: 533 LALLLAEIEEHGITLDVPYLRALADELGGQLAGIERQVYELAGEEFNLGSPKQLGHMLFE 592 Query: 593 KQ--GIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINP 650 K +++T G+ ST+ E+LE +A + + I+E+R L KLK TY D LP ++NP Sbjct: 593 KLGLRADKMRRTKTGSYSTNHEILESMAESHAIIPPIIEHRELLKLKGTYLDALPPLVNP 652 Query: 651 KTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIE 710 TGR+HTS++QAV ATGRLSS DPNLQNIP+R + GRRIR+AF+A +VS DYSQIE Sbjct: 653 HTGRIHTSFNQAVAATGRLSSQDPNLQNIPIRKDIGRRIRRAFVAAPGKTLVSIDYSQIE 712 Query: 711 LRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSA 770 LR+MAHLS D+ L+ AF D+H TAAEVF LP E + ++RR AKA+N+GL+YG S Sbjct: 713 LRVMAHLSGDERLVQAFQNDVDVHTQTAAEVFDLPREEIGPDERRVAKAVNYGLMYGQSE 772 Query: 771 FGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKS 830 FGLA+ L I R +A YM+ YFER+ V YM++ A A+ +G TL GRR +PD+ + Sbjct: 773 FGLAQSLGISRAQAAHYMERYFERFSTVRAYMDQVVADARAEGAAVTLLGRRRPIPDLDA 832 Query: 831 SNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHK 890 N RR AAER A N P+QG+AADIIK AM+ V A L + M++ VHDELVFEV Sbjct: 833 RNQQRRRAAERVAQNTPVQGSAADIIKLAMLRVAAHLARGEWDASMLLTVHDELVFEVVP 892 Query: 891 DDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 + + AK + ME LDVPL+ G +NW AH Sbjct: 893 EQAETFAKAMIAEMEGAYALDVPLVASAGIADNWADAH 930 >UniRef50_A2C810 DNA polymerase I n=16 Tax=Cyanobacteria RepID=A2C810_PROM3 Length = 986 Score = 901 bits (2328), Expect = 0.0, Method: Composition-based stats. Identities = 359/993 (36%), Positives = 514/993 (51%), Gaps = 74/993 (7%) Query: 1 MVQIPQNPLIL-VDGSSYLYRAYHAFPP-----LTNSAGEPTGAMYGVLNMLRSLIMQYK 54 M + PL+L VDG S +R+++AF L G PT YG L L Sbjct: 1 MPEAANKPLLLLVDGHSLAFRSFYAFSKGGEGGLATKDGTPTSVTYGFLKALLDNCKGLS 60 Query: 55 PTHAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKA-MGLPLLAVSGVE 113 P + FD TFR + +YK++R PD ++ L +++ + LPL G E Sbjct: 61 PQGIVIAFDTAEPTFRHQADVNYKANRDVAPDIFFQDLKQLQEILENNLQLPLCLAPGYE 120 Query: 114 ADDVIGTLAREAEKAGRPVLISTGDKDMAQLVTP--NITLINTMTN--------TILGPE 163 ADDV+GTLA +A + G V I +GD+D+ QLV +I ++ +++ Sbjct: 121 ADDVLGTLANQASRDGWGVRILSGDRDLFQLVDDQRDIAVLYMGGGPYAKSSGPSLIDEA 180 Query: 164 EVVNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAG 223 V++K GV P +++ AL GDSSDNIPGV GVG KTA LL+ G LD +Y ++ Sbjct: 181 GVLSKLGVIPNKVVELKALTGDSSDNIPGVKGVGPKTAITLLKENGDLDGIYNALAEVEA 240 Query: 224 LSFRGAK-----TMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGL 278 + ++ + +KL +++ AYLS LA I D+ L LE+ + L Sbjct: 241 EGEKASRGAIKGALKSKLSNDRDNAYLSLHLAEILVDIPLPKAPR-LELGSVDNDGLTDR 299 Query: 279 FKKYEFKRWTADVEAGKWLQAKG-----------AKPAAKPQETSVADEAPEVTATVISY 327 E V + + G +K A P E + E Sbjct: 300 LSSLELNSLVRQVPSFVATFSSGGFKANRHELEPSKSATSPVEPESSTETKVSNDNEQPA 359 Query: 328 DNYVTILDEETLKAWIAKLEKA----PVFAFDTETDSLDNISANLVGLSFAIEPG--VAA 381 I + E L+ + +L A DTET +L+ A LVGL G A Sbjct: 360 LEPQLITNPEELQELVKRLMGYRDRLKPVALDTETTALNPFCAELVGLGVCWGEGLQDLA 419 Query: 382 YIPVAHDYL------DAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIEL 435 YIP+ H +A Q+ E L+ + P L K QN KYDR IL +G+ L Sbjct: 420 YIPIGHHPPAELLEAEAACQLPLEAVLKAIAPWLASNDHPKALQNAKYDRLILLRHGLAL 479 Query: 436 RGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAG 495 G+ DT+L Y+ ++ A +H ++ +AER K F E+ GKG+ TF +A+ A Sbjct: 480 EGVVMDTLLADYLRDAAA-KHGLEVMAEREFKITPTGFSELVGKGQ---TFADVAIPTAS 535 Query: 496 RYAAEDADVTLQLHLKMWPDLQKH-KGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHN 554 Y D +T +L L++ L+ L + E +E PL PVL+ +E G++ID L Sbjct: 536 LYCGMDVHLTRRLALRLRAQLEDMGAKLLPLLEQVEQPLEPVLALMEATGIRIDLPYLQT 595 Query: 555 HSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQ--GIKPLKKTPGGAPSTSEE 612 S EL L LE++A E AG +FNL+S KQL +LFE K ++T G ST Sbjct: 596 LSVELGETLERLEEQAREAAGVDFNLASPKQLGELLFETLGLNRKKSRRTKTG-WSTDAN 654 Query: 613 VLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSST 672 VLE+L D+P+ ++LE+R L+KL+STY D LP ++ +TGRVHT ++QAVTATGRLSS+ Sbjct: 655 VLEKLEADHPVVPLVLEHRVLSKLRSTYVDALPQLVESETGRVHTDFNQAVTATGRLSSS 714 Query: 673 DPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKD 732 +PNLQNIP+R E RRIR+AF+ E++ ++SADYSQIELRI+ HLS ++ L AF G D Sbjct: 715 NPNLQNIPIRTEFSRRIRKAFLPQENWQLLSADYSQIELRILTHLSGEEVLQEAFRNGDD 774 Query: 733 IHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYF 792 +H TA + L + V+S++RR K INFG+IYGM A AR + + EA+ ++ Y Sbjct: 775 VHALTARLL--LDKDEVSSDERRLGKTINFGVIYGMGAQRFARSTGVSQAEAKDFLSRYK 832 Query: 793 ERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIK------------------SSNGA 834 +RY V ++E A +GYVETL GRR + + G Sbjct: 833 QRYAKVFTFLELQERLALSEGYVETLLGRRRPFHFDRNGLGRLLGKDPMDIDLDVARRGG 892 Query: 835 RRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVD 894 A RAA NAP+QG++ADIIK AM+ + L A R+++QVHDELV EV ++ Sbjct: 893 MEAQQLRAAANAPIQGSSADIIKVAMVQLQEKLTAADLPARLLLQVHDELVLEVDPTALE 952 Query: 895 AVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 V + + Q ME L VPL+VE G G+NW +A Sbjct: 953 DVQQLVVQTMEKAVELSVPLVVETGIGDNWMEA 985 >UniRef50_B4U0B7 DNA polymerase I n=5 Tax=Streptococcus RepID=B4U0B7_STREM Length = 899 Score = 900 bits (2326), Expect = 0.0, Method: Composition-based stats. Identities = 341/937 (36%), Positives = 501/937 (53%), Gaps = 74/937 (7%) Query: 5 PQNPLILVDGSSYLYRAYHAFPP----LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 +N L+L+DGSS +RA+ A N +G T A+YG ML ++ + +PTH V Sbjct: 22 NKNKLLLIDGSSVAFRAFFALYNQIDRFKNHSGLHTNAIYGFHLMLDHMMKRVQPTHVLV 81 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 FDA TFR ELF YK+ R PD+ R Q + M+ A+G+ + EADD+IGT Sbjct: 82 AFDAGKTTFRTELFADYKAGRAKTPDEFREQFPYIRDMLGALGIAFYELEHYEADDIIGT 141 Query: 121 LAREAEKAG--RPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPE 174 L + AE+ V I +GDKD+ QL N + + P +++K G+ PE Sbjct: 142 LDKMAERTELPFDVTIVSGDKDLIQLTDANTVVEISKKGVAEFEEFTPAYLMDKMGLTPE 201 Query: 175 LIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAA 234 ID ALMGD SDNIPGV +GEKT LL G L+ +Y + M Sbjct: 202 QFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEYGSLEGIYQHVDSFK------PSKMKE 255 Query: 235 KLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAG 294 L +KE A+LS LATI T + + E + Q P + L + + +F + + + Sbjct: 256 NLLHDKEQAFLSKTLATINTSAPITIGLEDIVYQGPDLDRLSQFYDEMDFVQLKNALASQ 315 Query: 295 KWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAF 354 + ++ Y + D I + F Sbjct: 316 LPQEP-------------------------VAEIAYQEVTD-------IRADMFSDDTVF 343 Query: 355 DTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKA 414 E + L+G ++ + + A ++ EL K +LE Sbjct: 344 YFEALRDNYHREELIGFAWGNQGQIYASADISLLTT------------ELFKKVLEQP-- 389 Query: 415 LKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFE 474 + K + +L++ G++L ++D L +Y+L S ++M +LA + T E Sbjct: 390 -IATYDFKRSKVLLSHLGLDLPAASYDARLANYLL-STVEDNEMATLARLYTTIPLDTDE 447 Query: 475 EIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLV 534 + GKG + ++ + A V L M L +H+ +++ +IE+PL Sbjct: 448 VVYGKGVKRAVPDKA---VLLGHLARKVQVLLDSRPVMLDKLAEHE-QADLYTDIELPLA 503 Query: 535 PVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQ 594 VL+++E G+ ++ L +E+ + + EL ++ +E+AGE FN++S KQL ILFEK Sbjct: 504 NVLAKMEIEGIAVNQDSLQEMAEQNKVVIEELTQEIYEMAGEVFNINSPKQLGVILFEKM 563 Query: 595 GIKP--LKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKT 652 + KKT G ST+ +VLE LA P+ IL+YR + KL+STY L I Sbjct: 564 QLPLHLTKKTKTG-YSTAVDVLERLAPIAPIVAKILDYRQITKLQSTYVIGLQDYI-MAD 621 Query: 653 GRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIEL 711 GR+HT Y Q +T TGRLSS DPNLQNIP+R E+GR IR+AF +D V++S+DYSQIEL Sbjct: 622 GRIHTRYLQDLTQTGRLSSVDPNLQNIPIRLEQGRLIRKAFTPSHDDAVLLSSDYSQIEL 681 Query: 712 RIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLP-LETVTSEQRRSAKAINFGLIYGMSA 770 R++AH+S D+ L+ AF EG DIH +TA VFG+ E VT+ RR+AKA+NFG++YG+S Sbjct: 682 RVLAHISGDEHLIAAFKEGADIHTSTAMRVFGIEKPEDVTANDRRNAKAVNFGIVYGISD 741 Query: 771 FGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKS 830 FGL+ L IPRK+A+ Y+D YFERYPG+ YMER +AK++GYVETL RR LPDI S Sbjct: 742 FGLSNNLGIPRKQAKAYIDTYFERYPGIKAYMERVVREAKDKGYVETLFKRRRQLPDINS 801 Query: 831 SNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHK 890 R+ AER AIN+P+QG+AADI+K AMI +D L A +M++QVHDE+V EV Sbjct: 802 RQFNLRSFAERTAINSPIQGSAADILKIAMINLDQALVAGGFETKMLLQVHDEIVLEVPS 861 Query: 891 DDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 ++ AV + + + ME+ L VPL V+ +G++W +A Sbjct: 862 HELAAVKELVKETMESAVNLAVPLRVDESAGKSWYEA 898 >UniRef50_Q30R59 DNA polymerase A n=6 Tax=Epsilonproteobacteria RepID=Q30R59_SULDN Length = 902 Score = 899 bits (2324), Expect = 0.0, Method: Composition-based stats. Identities = 326/927 (35%), Positives = 504/927 (54%), Gaps = 36/927 (3%) Query: 7 NPLILVDGSSYLYRAYHAFP-PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 + ++D + +R+++A P L NS G PTG + G N + +L Q+ + D K Sbjct: 3 KTVTIIDTFGFFFRSFYALPQHLKNSQGFPTGLLTGFTNFISTLQKQHDSDYIVFAIDTK 62 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 G +FR E+ +YK++R P P +L Q+ + MG L G EADDVI T+ R A Sbjct: 63 GDSFRKEIDPNYKANRQPPPQELSMQLPIAIEWIDKMGYKTLGFDGYEADDVIATVVRFA 122 Query: 126 EKAGRPVLISTGDKDMAQLVTP-NITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMG 184 ++ V + + DKD+ QL+ + L++ + ++ +E KYG+ P+ ID+ +++G Sbjct: 123 KEKSYNVRVVSHDKDLFQLIDDGRVVLVDAIKKQVMDEDECFKKYGISPKQFIDYQSILG 182 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 DS+DNIPGV G+G+ A+ LL LD +YA E I L + KL + KE AY Sbjct: 183 DSADNIPGVKGIGKVGAEKLLIEYETLDNIYANIENIKPL------GIQKKLLEFKEQAY 236 Query: 245 LSYQLATIKTDVELELTCEQLEVQ-QPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAK 303 +S +L T+ V E+ ++ + + KYE + A + + K Sbjct: 237 MSKKLVTLSCSVFESFDFEEFKMDIENPFLNIYDELVKYEQNGILRALNAKNLVHVEAVK 296 Query: 304 PAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDN 363 +T+ V I D + LK +++L + AFDTET LD Sbjct: 297 KVEAEAQTNK-----------KVNFRAVLIDDAKELKRVLSELRDDTIVAFDTETTGLDY 345 Query: 364 ISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKY 423 + +LVG SF A Y+P+AH YL +QIS+E A +K + VG N+K+ Sbjct: 346 ENDSLVGFSFCFNEDEAYYVPIAHFYLGVGEQISQEDAKIAIKKIFNS---RVVGHNIKF 402 Query: 424 DRGILAN-YGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 D + G I D+M+ ++++N +D L+E+ L+HK ITF+E KG+ Sbjct: 403 DLHFVIRFLGEGELDIFADSMILAWLINP-ESALSLDKLSEKLLEHKMITFKESVKKGE- 460 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKH--KGPLNVFENIEMPLVPVLSRI 540 TF +ALEEA YAAEDA +TL+L+ L+ + + + +E P + L ++ Sbjct: 461 --TFASVALEEACNYAAEDAYITLRLYYLFLEMLKDQGAEHLIEEAKEVEFPFIKTLLKM 518 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK 600 E +G++++ L E L+EL KK +E+A EFN++ST+QL +LFE+ G+ K Sbjct: 519 EMHGIELNSLFLEQFLAEAKDSLSELTKKIYELASLEFNINSTQQLGNVLFEQLGLPTSK 578 Query: 601 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLM-INPKTGRVHTSY 659 KT G ST E+VL L ++ + +LEYR + KL STY + L + K R+HTS+ Sbjct: 579 KTKTG-YSTDEKVLNSLLGEHEIIPYLLEYREVYKLYSTYIEPLLKLSQQDKESRIHTSF 637 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSR 719 Q T TGRLSS +PNLQNIP R G +IR+AF+APE ++ DYSQIELR++AH ++ Sbjct: 638 VQTGTTTGRLSSKNPNLQNIPTRTALGTKIREAFVAPEGKKLIGIDYSQIELRLLAHFTQ 697 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 D+ L+ AF + KDIH TA +FG E +R AK +NFGL+YGM L+ L I Sbjct: 698 DRVLVEAFMQDKDIHMQTAIALFG---EEDAPLKRNVAKTVNFGLLYGMGQKKLSETLKI 754 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 EA++ ++ YF +P V Y +KE GYVETL RR Y D +S++ RAA Sbjct: 755 TTAEAKEIIERYFSSFPSVKSYFRSIVDFSKEAGYVETLLKRRRYF-DYESASPMFRAAY 813 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 ER A+N+ QG+A+DIIK +M + ++ E+ +M++Q+HDEL+FEV + + + ++ Sbjct: 814 EREAVNSIFQGSASDIIKLSMNKIHKLIEDEKLNAKMLLQIHDELIFEVDTSEAEILGEK 873 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWDQ 926 +M+N L++PL + G+ W + Sbjct: 874 FKNIMQNIMPLNIPLKASMKIGDKWSE 900 >UniRef50_B1C859 DNA polymerase I n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C859_9FIRM Length = 888 Score = 899 bits (2323), Expect = 0.0, Method: Composition-based stats. Identities = 315/929 (33%), Positives = 503/929 (54%), Gaps = 50/929 (5%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 + L+++D S +Y+ + P+ + G T A+YG LN++ LI KP + FD Sbjct: 2 KKKLVIIDAYSIIYKCFFGVRPMHSPKGISTNAVYGFLNIILKLISDEKPNYLYAAFDKG 61 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 K FR + + YK+ R MP++LR QI + ++ A + L V EADD+IG+++ A Sbjct: 62 HKNFRHDKYADYKAGRQSMPEELREQIPYIERLLDAANIISLKVDDYEADDIIGSVSEVA 121 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLA 181 +K G ++ TGD+D QLV+ + ++ + ++ + + KY + P+ +ID A Sbjct: 122 DKEGIDTVVITGDRDSFQLVSEHTKILYSKRGISDIEVINEDYLKEKYNLTPKQMIDLKA 181 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGD SDNIPGV GVGEKTA LL+ LD +Y E+I G + KL +K+ Sbjct: 182 LMGDKSDNIPGVKGVGEKTALNLLEKYSDLDGVYEHIEEIKG-------KLQEKLINDKD 234 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 A+LS L TI+ +++++L + EE + + ++ + K + Sbjct: 235 NAFLSKDLGTIEVNMDIDLDLNEECNFNFENEEFISILRELDLKSIIKKL---------- 284 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 K +T ++ E + Y TI + +L + ++ + Sbjct: 285 ---GVKANDTREDNKENEKDDFSHIKEEYKTISKDISLDEVLNNIKDKKSLSVYF----- 336 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 +S +L + A + YL +++++ L+ V N Sbjct: 337 -VLSDDLKTI------KSAMIFDKDNFYLYDSSVSDISELVKIMRSGLD-----IVTHNF 384 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 K + + G + FD L Y+LN R+ ++ +++++L I EE G+ Sbjct: 385 KDVYKVFVSQGYDDIHCRFDIYLGGYVLNPSDERYSLEVMSKKYLD---IDLEEEKGEAV 441 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 Q +F I + A L K + ++++NIE L+ VL +E Sbjct: 442 QQ-SFLDIEDNNKYNMQMKKAKSIYSLAGIFKEK-IKEEEMEDLYQNIEHKLMYVLGDME 499 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEE--FNLSSTKQLQTILFEKQGIKPL 599 G K+D L + R+ +L + E AGE+ FN++STKQL +LF+K G+ L Sbjct: 500 LEGFKVDLNTLEELGVDFDKRVEDLTRNIREAAGEDEDFNVNSTKQLGHVLFDKMGLPAL 559 Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 KKT G ST+ EVLE+L +P+ +I++ R ++KL STY L +I+ T ++H+++ Sbjct: 560 KKTKTG-YSTNIEVLEKLRDHHPIIPMIIDLRQISKLNSTYVKGLVSLIDKDTNKIHSTF 618 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQIELRIMAHLS 718 +Q +T TGR+SS++PNLQNIPVR EEGR IR+ FI+ E+ V+V ADYSQIELR++AH+S Sbjct: 619 NQTITTTGRISSSNPNLQNIPVRTEEGRIIRKVFISSSENNVLVDADYSQIELRVLAHIS 678 Query: 719 RDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLN 778 +D+ L+ +F +DIH TA+EVF +P++ VTSE R SAKA+NFG++YG+S FGLA+ L+ Sbjct: 679 KDEKLINSFKNNEDIHTRTASEVFNVPIDEVTSEMRSSAKAVNFGIVYGISDFGLAKGLS 738 Query: 779 IPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAA 838 I RK+A++Y+D Y +YPGV +YME AKEQGYV T+ RR Y+ +I S N R+ Sbjct: 739 IARKDAKEYIDTYLSKYPGVCKYMEDIVVTAKEQGYVTTMFNRRRYINEIYSKNFNVRSF 798 Query: 839 AERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAK 898 ER A+N P+QG+AADIIK AM+ V L + + ++I+QVHDEL+ + ++V+ V Sbjct: 799 GERTALNTPIQGSAADIIKLAMVNVQNELNKRKLKAKLILQVHDELIIDTPMEEVEEVKA 858 Query: 899 QIHQLMENCTRLDVPLLVEVGSGENWDQA 927 + MEN + PL ++ G+ W +A Sbjct: 859 LLKDKMENVVDMSCPLKADISVGKTWFEA 887 >UniRef50_C9LLQ0 DNA polymerase I n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLQ0_9FIRM Length = 858 Score = 898 bits (2322), Expect = 0.0, Method: Composition-based stats. Identities = 360/927 (38%), Positives = 492/927 (53%), Gaps = 76/927 (8%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 + L++VDGSS LYRA+ PPL+ G PT A+ G LNML + + P + AV FD Sbjct: 2 EKKLVVVDGSSLLYRAFFGLPPLSYH-GIPTNAVMGFLNMLYDIYKNFDPEYMAVSFDKN 60 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 +TFR E+++ YK+ R P P +L Q + ++ +G + V G E DD++GTLA Sbjct: 61 KQTFRSEVYKEYKATRKPAPPELVPQFALIREALRTLGAAVYEVDGYEGDDILGTLAARY 120 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI----LGPEEVVNKYGVPPELIIDFLA 181 EK PV I TGD+D QL T + T+ T + PE VV KYG+ P +ID A Sbjct: 121 EKE-LPVFIVTGDRDALQLATKDTTVYITQRGVSQMAAMTPEAVVEKYGITPRQVIDMKA 179 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGD+SDNIPGVPGVGEKTA LL LD LY +I G + +L NKE Sbjct: 180 LMGDTSDNIPGVPGVGEKTAAKLLSQYQTLDNLYGHVGEIKG-------AVGKRLAANKE 232 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 +AYLSY+LATIKTDV E E+ Q EE++ F + +R + Sbjct: 233 LAYLSYRLATIKTDVPFEAALEE-MKQPVHFEEMMEFFHRLGLERIADRYSTLPRFRELA 291 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 + Q +V E K E + Sbjct: 292 VSKKKEIQAAAVK---------------------LEEFPLHPDFTGKEVSLVLHMEGKAP 330 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 + V V +P + + ++ ++ K + E + Sbjct: 331 FYHADLAV---VGYGNHVYRALPERFEDVCMALAAAKHVIVQDSKSIYESD--------- 378 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 GI +D L SY+L + + +AE + G Sbjct: 379 ------FPTEGI----PFYDMTLVSYVLEPTRTTYPLSYMAELF--------------GT 414 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 + + + + EE L L+ + K G ++FE IE PL VL+ +E Sbjct: 415 SPVFPDHLDTEEEKSVCI--CGFLLSLYATSLEHM-KSNGVQSLFEKIENPLAAVLAEME 471 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 + G+ D K EL ++ +L +E AGEEFN++S KQL ILFEK G+ KK Sbjct: 472 KAGIATDQKRWEAVCHELKVQERKLLSLIYEAAGEEFNVNSPKQLGVILFEKMGMPAGKK 531 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 T G ST+ +VLE LA YP K ILEYR ++KL STY + LPL+I P+TGR+HTS++Q Sbjct: 532 TKNG-YSTAADVLEMLAKSYPFVKDILEYRTISKLISTYLEALPLLIRPETGRIHTSFNQ 590 Query: 662 AVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY-VIVSADYSQIELRIMAHLSRD 720 VTATGRLSS+DPNLQNIPVR EGR+IR F+ Y +S+DYSQ+ELR++AH+S D Sbjct: 591 TVTATGRLSSSDPNLQNIPVRTAEGRQIRSLFVPGPGYDCFISSDYSQVELRVLAHMSGD 650 Query: 721 KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 + L+ AF +DIHR TAAEV G+P E VTSEQR AKA+NFG+IYG+S FGLA QL I Sbjct: 651 ESLIRAFRNKEDIHRRTAAEVLGIPFEEVTSEQRSHAKAVNFGIIYGISDFGLANQLGIS 710 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 R EA Y+ YFERYP + +M+ A+E G +TL GR LPDI+SSN RR+ AE Sbjct: 711 RGEAGTYIKKYFERYPYIHAFMKSMVEDAQESGRAKTLFGRYRELPDIRSSNFNRRSFAE 770 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 R A+N P+QGTAADI+K AMI V ++ E + R+++QVHDELV E ++ + + + Sbjct: 771 RTAMNTPIQGTAADIMKLAMIEVSRRIKEEGYKSRVLLQVHDELVVEAVSEEKENLKTLL 830 Query: 901 HQLMENCTRLDVPLLVEVGSGENWDQA 927 + ME+ L VPL+ +V G+NW +A Sbjct: 831 KETMESVVELKVPLIADVHEGKNWAEA 857 >UniRef50_Q7WZP8 DNA polymerase type I n=2 Tax=unclassified Bacteroidetes RepID=Q7WZP8_9BACT Length = 939 Score = 896 bits (2317), Expect = 0.0, Method: Composition-based stats. Identities = 351/948 (37%), Positives = 522/948 (55%), Gaps = 51/948 (5%) Query: 6 QNPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 L L+DG S +YRA+ A T + G TGA+ G +N L +L+ + KPTH V FD Sbjct: 5 TPKLFLLDGMSLIYRAHFALGKAATTTAQGLKTGAILGFVNTLVALLEKEKPTHLIVAFD 64 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 K KTFR LF YKSHRP P+++ I + ++++ G+ + SG EADD++GTLA+ Sbjct: 65 GKEKTFRHALFPAYKSHRPVQPEEISIAIPYIKSILEGFGILAITYSGYEADDLLGTLAK 124 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINT----MTNTILGPEEVVNKYGV-PPELIID 178 +A G I + DKD+AQ+V NI L +TILG +E++ ++ + PE + D Sbjct: 125 KAAVMGCRTYIMSTDKDLAQIVGDNIYLYKPSSYGEKSTILGEKEILAQWEIARPEQVRD 184 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 LAL GD SD IPG+P +G+KTA+ L++ L+ + A + G + A L Q Sbjct: 185 ILALEGDPSDFIPGIPSIGKKTARKLIKEFDNLENILAHSHMLTG-------KLKANLIQ 237 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 + LS +LATI+T+V + L E+ Q P +L +F EFK+ + + Sbjct: 238 YADQGILSKELATIRTNVPITLDLEKCHYQGPNKVKLEPIFSLLEFKQLKQRLFGKPNPE 297 Query: 299 ---------AKGAKPAAKPQETSVA-----DEAPEVTATVISYDNYVTILDEETLKAWIA 344 G P AK QE + + D P T D Y I + + Sbjct: 298 KATNQPVGLFDGINPMAKSQENNHSNGHGLDRQPHTTEGQHEQDAYALIETLPACEKLLE 357 Query: 345 KLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALEL 404 KLE A +AFD T +D A+L+G++FA +PG A YI + P++ + + L L Sbjct: 358 KLESATKWAFDIATTGMDPHLADLLGIAFAYQPGTAYYIALP------PNKAAAQPFLAL 411 Query: 405 LKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAER 464 L+PL + LKVG NLK ++ +G+ + FDTM+ ++ + H + +L+E+ Sbjct: 412 LQPLFQRTDVLKVGHNLKNALIVMQRHGLSIAPPLFDTMIAHGLVAAD-MDHHLTTLSEQ 470 Query: 465 WLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLN 524 +L H+ + E YA E AD+ L ++ K+ L++HK Sbjct: 471 YLNHR---------SYLKPPNRAEKESEGIKNYAGEGADLVLHIYPKIAQALREHK-VAT 520 Query: 525 VFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTK 584 +F +EMPLV VL +E GV ID L E+ L++K + +A FN+ S K Sbjct: 521 LFYRVEMPLVQVLVAMELAGVSIDLPFLATLGSEMEPTTKALKEKIYTLAQTTFNIDSPK 580 Query: 585 QLQTILFEKQG-IKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDK 643 QL +LFEK KT GG +T E +L +L+ +P+ +I+EYR KL+STY D Sbjct: 581 QLGVVLFEKLALHTKPMKTKGGQYATGEAILAKLSKVHPIVPLIMEYRTWQKLRSTYVDA 640 Query: 644 LPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIV 702 LP +++P R+H +YHQ V TGRLS+T PNLQ IP+R GR +R+AFI + + Sbjct: 641 LPTLLHPIDQRLHATYHQTVVTTGRLSATGPNLQQIPIRTPTGRALRKAFIPHQKGDCLF 700 Query: 703 SADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINF 762 SADYSQIELRIMA ++D ++ AF +DIH+ TA ++F + V E R+ AK NF Sbjct: 701 SADYSQIELRIMAAYAQDTTMIMAFQSDQDIHQITAQKLFKTVI--VDQEMRQKAKIANF 758 Query: 763 GLIYGMSAFGLARQLN-IPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGR 821 G+IYG+S FGL+ ++ + RKEA + ++ YFE +PG+ Y++ + A A+ GYV TL GR Sbjct: 759 GIIYGISPFGLSERMEHLSRKEAAELIEAYFEAFPGIKTYIDDSIAHAEANGYVRTLLGR 818 Query: 822 RLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVH 881 + +LPD+ +SN R A R AIN P+QG+AA++IK AMI + WL+ + ++I+QVH Sbjct: 819 KRFLPDLYASNPTTRGVARRNAINTPIQGSAAEMIKLAMIHIQDWLEKHKLSTKLIIQVH 878 Query: 882 DELVFEVHKDDVDAVAKQIHQLMENCTRL-DVPLLVEVGSGENWDQAH 928 DELVF V + ++ + I LM L +VP+ V G NW +AH Sbjct: 879 DELVFNVPRSEIADIQHHIPLLMATALPLENVPIKVNWNIGANWLEAH 926 >UniRef50_C5B5N3 DNA polymerase I n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B5N3_METEA Length = 957 Score = 896 bits (2317), Expect = 0.0, Method: Composition-based stats. Identities = 371/962 (38%), Positives = 510/962 (53%), Gaps = 51/962 (5%) Query: 5 PQNPLILVDGSSYLYRAYHAFPPL------TNSAGEPTGAMYGVLNMLRSLIMQ----YK 54 P + LILVD SS+++RAYH S G PTGA L + Sbjct: 9 PGSRLILVDASSFVFRAYHQSLNQDPKYNARPSDGLPTGAARLFFAKLFQFVRDGAAGVV 68 Query: 55 PTHAAVVFDAK-GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVE 113 PTH +VFD ++ R +L+ YK++R P DLR Q+ + V+A GLP++ + E Sbjct: 69 PTHLGIVFDKGSRESHRRQLYPEYKANRSETPADLRPQMPLVREAVRAFGLPVIELDRTE 128 Query: 114 ADDVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----------TILGPE 163 ADD+I T AR AE G V+I + DKD+ QLV+P I + + L E Sbjct: 129 ADDLIATYARAAEAKGAEVVIVSADKDLQQLVSPRIRFYDAESGSKGKPGYRPERNLDVE 188 Query: 164 EVVNKY-GVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIA 222 VV K+ G+ P I D LAL+GD+SDNIPGVPG+G KTA LL G L+ L I Sbjct: 189 AVVAKWEGLQPGQIGDALALIGDTSDNIPGVPGIGLKTAAQLLLEYGSLEALLEGASAIK 248 Query: 223 GLSFRGAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKY 282 L E A LS +L + V+L + + L + P L+ K Sbjct: 249 Q------PKRRENLLAAAEGARLSRRLVELDCSVDLPVDPDTLALPAPDGRRLVAYLKAL 302 Query: 283 EFKRWTADVEAGKWLQAKGAKP----AAKPQETSVADEAPEVTATVISYDNYVTILDEET 338 E V + A P AA P AD D Y + ++ Sbjct: 303 ELPALAKRVAKELGVDADRVPPDAELAASPTTAPGADGPVMPPFPAADPDAYGLVATQDD 362 Query: 339 LKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLD------- 391 L WIA A F L A +GL A+EPG A Y+P+ H Sbjct: 363 LDGWIAAARAAGRFGLH-----LHRGDAGAIGLGIAVEPGRAVYVPIEHRAGGDGLFGGL 417 Query: 392 APDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNS 451 AP QI A + L+ED K+ +LK G E+ G A D L SY L S Sbjct: 418 APGQIDAAAAWGAVGALMEDAGVRKIVHDLKGTAKAAGRLGFEIAG-ADDVGLMSYALES 476 Query: 452 VAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLK 511 H + LA R L + + + G+G+ ++ +A A AA+ AD L+L Sbjct: 477 GLTGHGLPELAARHLGNAAPDPDALRGQGRGRVDAEAVAPRAAAPVAAQIADAVLRLWTV 536 Query: 512 MWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAH 571 + P L+ V+E +E+P+VPVL+R+E GV+ID VL S + LA LE + H Sbjct: 537 LAPRLEGTPTQA-VYEELELPMVPVLARMEAAGVRIDRAVLTELSRDFGATLARLETEIH 595 Query: 572 EIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALD-YPLPKVILEY 630 E+ G F + S KQ+ +LF + G+ ++TP G +T +LEELA + LP +L++ Sbjct: 596 ELGGGPFQIGSPKQIGDVLFGRLGLPGGRRTPSGQWATGATILEELAAAGHALPGRLLDW 655 Query: 631 RGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIR 690 R +KLKSTY D L + T RVHT++ A T TGRLSS+DP L NIP+R EEGRRIR Sbjct: 656 RRTSKLKSTYADALLSAADRGTDRVHTTFSLAATTTGRLSSSDPGLHNIPIRTEEGRRIR 715 Query: 691 QAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVT 750 AF+A E + I+SADYSQ+ELR++AH++ + AFAEG DIH ATA+++FG+P+ V Sbjct: 716 AAFVAAEGHRILSADYSQVELRLLAHIADVPRMREAFAEGVDIHAATASDMFGVPVGAVP 775 Query: 751 SEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAK 810 E RR AK INFG++YG+SAFGLA +L I R+EA +++ YFER+PG+ +Y+E T+ + Sbjct: 776 GELRRRAKTINFGIVYGISAFGLADRLGIGRQEAAEFIARYFERFPGIRDYVEGTKTFCR 835 Query: 811 EQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAE 870 E G+V TL GR + P I S N + R ER A+NAP+QGTAADII+RAMI ++ L Sbjct: 836 EHGFVRTLFGRVCHYPGITSGNVSERMGVERQAVNAPIQGTAADIIRRAMIRMEGALADS 895 Query: 871 QPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENC----TRLDVPLLVEVGSGENWDQ 926 RM++QVHDELVFEV + + A+ + +M L VPL+VE S ENW++ Sbjct: 896 GLSARMLLQVHDELVFEVAEAECADTARVVSDVMAGAAAPDIDLAVPLVVEARSAENWER 955 Query: 927 AH 928 AH Sbjct: 956 AH 957 >UniRef50_P52028 DNA polymerase I, thermostable n=18 Tax=Bacteria RepID=DPO1T_THET8 Length = 834 Score = 896 bits (2315), Expect = 0.0, Method: Composition-based stats. Identities = 325/924 (35%), Positives = 484/924 (52%), Gaps = 102/924 (11%) Query: 5 PQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 P+ ++LVDG YR + A LT S GEP A+YG L + + VVFDA Sbjct: 10 PKGRVLLVDGHHLAYRTFFALKGLTTSRGEPVQAVYGFAKSLLKALKEDGYKAVFVVFDA 69 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 K +FR E +E YK+ R P P+D Q+ + +V +G L V G EADDV+ TLA++ Sbjct: 70 KAPSFRHEAYEAYKAGRAPTPEDFPRQLALIKELVDLLGFTRLEVPGYEADDVLATLAKK 129 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMG 184 AEK G V I T D+D+ QLV+ + +++ ++ PE + KYG+ PE +DF AL+G Sbjct: 130 AEKEGYEVRILTADRDLYQLVSDRVAVLHPE-GHLITPEWLWEKYGLRPEQWVDFRALVG 188 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 D SDN+PGV G+GEKTA LL+ G L+ L +++ + R K++ + E Sbjct: 189 DPSDNLPGVKGIGEKTALKLLKEWGSLENLLKNLDRVKPENVR------EKIKAHLEDLR 242 Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304 LS +L+ ++TD+ LE+ Q ++P E L ++ EF + + P Sbjct: 243 LSLELSRVRTDLPLEVDLAQ--GREPDREGLRAFLERLEFGSLLHEFGLLEAPAPLEEAP 300 Query: 305 AAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNI 364 P+ V LKA A + A D Sbjct: 301 WPPPEGAFVGFVLSRPEPMW------------AELKALAACRDGRVHRAAD--------- 339 Query: 365 SANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYD 424 ++ + L+ ++ LL K Sbjct: 340 ------------------------------PLAGLKDLKEVRGLL-----------AKDL 358 Query: 425 RGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQL 484 + + G++L D ML +Y+L+ + +A R+ Sbjct: 359 AVLASREGLDLV-PGDDPMLLAYLLDPSNTTP--EGVARRYGG----------------- 398 Query: 485 TFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNG 544 E AA A ++ +LH + L+ + L ++ +E PL VL+ +E G Sbjct: 399 --------EWTEDAAHRALLSERLHRNLLKRLEGEEKLLWLYHEVEKPLSRVLAHMEATG 450 Query: 545 VKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT-P 603 V++D L S EL + LE++ +AG FNL+S QL+ +LF++ + L KT Sbjct: 451 VRLDVAYLQALSLELAEEIRRLEEEVFRLAGHPFNLNSRDQLERVLFDELRLPALGKTQK 510 Query: 604 GGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAV 663 G STS VLE L +P+ + IL++R L KLK+TY D LP +++P+TGR+HT ++Q Sbjct: 511 TGKRSTSAAVLEALREAHPIVEKILQHRELTKLKNTYVDPLPSLVHPRTGRLHTRFNQTA 570 Query: 664 TATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGL 723 TATGRLSS+DPNLQNIPVR G+RIR+AF+A + +V+ DYSQIELR++AHLS D+ L Sbjct: 571 TATGRLSSSDPNLQNIPVRTPLGQRIRRAFVAEAGWALVALDYSQIELRVLAHLSGDENL 630 Query: 724 LTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKE 783 + F EGKDIH TA+ +FG+P E V RR+AK +NFG++YGMSA L+++L IP +E Sbjct: 631 IRVFQEGKDIHTQTASWMFGVPPEAVDPLMRRAAKTVNFGVLYGMSAHRLSQELAIPYEE 690 Query: 784 AQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAA 843 A +++ YF+ +P V ++E+T + +++GYVETL GRR Y+PD+ + + R AAER A Sbjct: 691 AVAFIERYFQSFPKVRAWIEKTLEEGRKRGYVETLFGRRRYVPDLNARVKSVREAAERMA 750 Query: 844 INAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQL 903 N P+QGTAAD++K AM+ + L+ RM++QVHDEL+ E + + VA + Sbjct: 751 FNMPVQGTAADLMKLAMVKLFPRLREMG--ARMLLQVHDELLLEAPQARAEEVAALAKEA 808 Query: 904 MENCTRLDVPLLVEVGSGENWDQA 927 ME L VPL VEVG GE+W A Sbjct: 809 MEKAYPLAVPLEVEVGMGEDWLSA 832 >UniRef50_Q04G12 DNA polymerase I n=28 Tax=Lactobacillales RepID=Q04G12_OENOB Length = 903 Score = 894 bits (2311), Expect = 0.0, Method: Composition-based stats. Identities = 329/934 (35%), Positives = 488/934 (52%), Gaps = 58/934 (6%) Query: 6 QNPLILVDGSSYLYRAYHAFPP----LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 L+L+DG+S +RA++A + G T A+ N ++ + P +A V Sbjct: 13 TKTLLLIDGNSLAFRAFYAMYNQLDRMVAHTGLHTNALVAFNNFFDQVVEKMNPDYALVA 72 Query: 62 FDAKG--KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIG 119 +DA TFR ++F+ YK R P +L Q L MV G+ + G EADD+IG Sbjct: 73 WDAGKGATTFRAKIFDDYKGDRQTTPPELSEQFPYLRKMVDLHGIHSYELPGFEADDIIG 132 Query: 120 TLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYG-VPPE 174 T ++ AEKAG I TGD+D+ QLVT N+++ T P+ + K+G + P Sbjct: 133 TYSKLAEKAGLKTTIITGDRDLTQLVTDNVSVNVTKKGVTELDRYTPKFLAEKWGGITPS 192 Query: 175 LIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAA 234 +I+ +L GD+SD+ PGV VG KTA LL G LD +Y + + + Sbjct: 193 QVIEMKSLTGDTSDHYPGVTKVGLKTAIKLLNEFGSLDGIYQHIDSMK------TSKLKE 246 Query: 235 KLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAG 294 L +KE AY +++LATI+TD +EL ++L Q +EL+ +++ +FK A + + Sbjct: 247 NLLNDKESAYRAHELATIRTDAPVELEMKELINQPINFQELIPFYEELDFKVQLAKIHSM 306 Query: 295 KWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAF 354 + G + VT L L Sbjct: 307 QKAGMVGQDQEEEKNVQ-------------------VTELKAANLDHLSEI---KNYLTV 344 Query: 355 DTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKA 414 +TDS + +A + V ++ E + L Sbjct: 345 YFQTDSDNYHTAKISAF------------VVGNENDGYFASRDLELLNSSVVRKLFKGDL 392 Query: 415 LKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFE 474 K N K +L G+++ + FD +L SY+L++ + + +LA R+ + Sbjct: 393 PKYVFNAKELIVLLNRLGLQINNLDFDFLLVSYLLDTTDNDNQLATLANRF-NVFLESDA 451 Query: 475 EIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLV 534 E+ G G E + A A +LH L H+ ++ IE+PL Sbjct: 452 EVYGSGVKFKIPE--NNETLFSHMANKASTISKLHDPSMKKLSDHQ-QAELYRQIELPLS 508 Query: 535 PVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQ 594 VL+ +E NG+K+D L +E R+ ELEK+ +E AG+EFN++S KQL +LF Sbjct: 509 KVLASMEINGIKLDQAELKKLGQEFDQRIFELEKQIYEEAGQEFNINSPKQLADLLFAHM 568 Query: 595 GIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGR 654 I P+KKT G ST+ VLEELA YP +IL+YR LAKL STY L ++NP + Sbjct: 569 KIPPIKKTKTG-YSTAANVLEELAEKYPFVGLILQYRQLAKLNSTYVKGLLEVVNPDDSK 627 Query: 655 VHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIELRI 713 +HT Y Q +T TGRLSS DPN+QNIP R+EEG+RIR+AF+ E + I +DYSQIELR+ Sbjct: 628 IHTRYLQTLTQTGRLSSVDPNMQNIPDRDEEGKRIRKAFVPSHEGWEIFGSDYSQIELRV 687 Query: 714 MAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLET-VTSEQRRSAKAINFGLIYGMSAFG 772 +AH++ D+ L AF G+DIH ATA +FGL + +T +QRR AKA+NFG++YG+S FG Sbjct: 688 LAHVTGDENLKKAFESGEDIHAATARSIFGLSTDQKITFDQRRRAKAVNFGIVYGISDFG 747 Query: 773 LARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSN 832 LA++L R E ++ + YF +P V +++ A A +QGYVET+ RR YLPDI S N Sbjct: 748 LAQRLGTSRIEGKEIIQTYFHEFPKVKNWIDSIIALAHKQGYVETIAQRRRYLPDIHSKN 807 Query: 833 GARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDD 892 R+ AER A N P+QG+AADIIK AMI + L + +M++QVHDEL+FE K + Sbjct: 808 FNLRSFAERTATNTPIQGSAADIIKIAMIKMQQALDDNHLKAKMLLQVHDELIFEAPKQE 867 Query: 893 VDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 +D + + + ++M++ +L+VPL VE G NW Sbjct: 868 IDILEELVPKVMDSAVKLNVPLRVEAHHGVNWYD 901 >UniRef50_P59200 DNA polymerase I n=187 Tax=Firmicutes RepID=DPO1_STRR6 Length = 877 Score = 893 bits (2309), Expect = 0.0, Method: Composition-based stats. Identities = 340/936 (36%), Positives = 503/936 (53%), Gaps = 72/936 (7%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPP----LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAA 59 + + L+L+DGSS +RA+ A N+AG T A+YG ML L+ + +P+H Sbjct: 1 MDKKKLLLIDGSSVAFRAFFALYQQLDRFKNAAGLHTNAIYGFQLMLSHLLERVEPSHIL 60 Query: 60 VVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIG 119 V FDA TFR E++ YK R PD+ R Q + ++ MG+ ++ EADD+IG Sbjct: 61 VAFDAGKTTFRTEMYADYKGGRAKTPDEFREQFPFIRELLDHMGIRHYELAQYEADDIIG 120 Query: 120 TLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPEL 175 TL + AE+ G + I +GDKD+ QL + + + P+ ++ + G+ P Sbjct: 121 TLDKLAEQDGFDITIVSGDKDLIQLTDEHTVVEISKKGVAEFEAFTPDYLMEEMGLTPAQ 180 Query: 176 IIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAK 235 ID ALMGD SDNIPGV VGEKT LL G L+ +Y + + M Sbjct: 181 FIDLKALMGDKSDNIPGVTKVGEKTGIKLLLEHGSLEGIYENIDGMK------TSKMKEN 234 Query: 236 LEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGK 295 L +KE A+LS LATI T + + E L P E L + + FK+ + Sbjct: 235 LINDKEQAFLSKTLATIDTKAPIAIGLEDLVYSGPDVENLGKFYDEMGFKQLKQAL---- 290 Query: 296 WLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFD 355 +++ ++ TI+D+ I++ + F Sbjct: 291 -----------------------NMSSADVAEGLDFTIVDQ------ISQDMLSEESIFH 321 Query: 356 TETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKAL 415 E + + NLVG FA G Y + L P + K LE Sbjct: 322 FELFGENYHTDNLVG--FAWSCGDQLYATDKLELLQDP----------IFKDFLEKTSLR 369 Query: 416 KVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEE 475 + K + +L +G++L+ AFD L Y+L S +++ ++A + + + E Sbjct: 370 --VYDFKKVKVLLQRFGVDLQAPAFDIRLAKYLL-STVEDNEIATIASLYGQTYLVDDET 426 Query: 476 IAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVP 535 GKG + E+ + A V ++ + L ++ G L + ++E PL Sbjct: 427 FYGKGVKKAIPE---REKFLEHLACKLAVLVETEPILLEKLSEN-GQLELLYDMEQPLAF 482 Query: 536 VLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG 595 VL+++E G+ + + L E L + +L ++ +E+AGEEFN++S KQL +LFEK G Sbjct: 483 VLAKMEIAGIVVKKETLLEMQAENELVIEKLTQEIYELAGEEFNVNSPKQLGVLLFEKLG 542 Query: 596 IKP--LKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTG 653 + KKT G ST+ +VLE LA P+ K IL+YR +AK++STY L I G Sbjct: 543 LPLEYTKKTKTG-YSTAVDVLERLAPIAPIVKKILDYRQIAKIQSTYVIGLQDWILA-DG 600 Query: 654 RVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQIELR 712 ++HT Y Q +T TGRLSS DPNLQNIP R E+GR IR+AF+ ED V++S+DYSQIELR Sbjct: 601 KIHTRYVQDLTQTGRLSSVDPNLQNIPARLEQGRLIRKAFVPEWEDSVLLSSDYSQIELR 660 Query: 713 IMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLP-LETVTSEQRRSAKAINFGLIYGMSAF 771 ++AH+S+D+ L+ AF EG DIH +TA VFG+ + VT+ RR+AKA+NFG++YG+S F Sbjct: 661 VLAHISKDEHLIKAFQEGADIHTSTAMRVFGIERPDNVTANDRRNAKAVNFGVVYGISDF 720 Query: 772 GLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSS 831 GL+ L I RKEA+ Y+D YFER+PG+ YM+ +A+++GYVETL RR LPDI S Sbjct: 721 GLSNNLGISRKEAKAYIDTYFERFPGIKNYMDEVVREARDKGYVETLFKRRRELPDINSR 780 Query: 832 NGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKD 891 N R AER AIN+P+QG+AADI+K AMI +D L A + +M++QVHDE+V EV K Sbjct: 781 NFNIRGFAERTAINSPIQGSAADILKIAMIQLDKALVAGGYQTKMLLQVHDEIVLEVPKS 840 Query: 892 DVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 ++ + K + Q ME +L VPL+ + G W +A Sbjct: 841 ELVEMKKLVKQTMEEAIQLSVPLIADENEGATWYEA 876 >UniRef50_B9Y7P1 DNA polymerase I n=2 Tax=Erysipelotrichaceae RepID=B9Y7P1_9FIRM Length = 900 Score = 893 bits (2308), Expect = 0.0, Method: Composition-based stats. Identities = 311/927 (33%), Positives = 497/927 (53%), Gaps = 65/927 (7%) Query: 7 NPLILVDGSSYLYRAYHA--FPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 ++LVDG+S L+RA++A P++ S G PT A+YG M+ + +P V FD Sbjct: 32 KKMLLVDGNSMLFRAFYATFMRPMSTSTGIPTNAIYGFAMMINKAVQIIQPDAMLVAFDK 91 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 TFR ELF YK R PD L Q + ++A G+ ++ +EADD+IG++ ++ Sbjct: 92 GKHTFRHELFAEYKGGRKETPDALVEQFPIVREYLEAAGIKQFEMTDIEADDIIGSMIKK 151 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFL 180 + + + D+DM QL+ ++ + E + K G+ P+ I D Sbjct: 152 YPD--WDINVLSSDRDMLQLIDETTSVWLMKKGISDIEEMTVESLKEKMGITPDQIRDLK 209 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 LMGD+SDNIPG+P VGEKTA LL+ G ++ L A +++ G + +E K Sbjct: 210 GLMGDASDNIPGIPKVGEKTALKLLEQFGTVENLIANTDQLKG-------KLKDNVEAFK 262 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 + A LS +LATIKTDVE+ E+ E L + +YE + + QA+ Sbjct: 263 DQALLSKRLATIKTDVEIPFETEEFTFH-ITPEPLRQFYVRYEMNSLASKLSTQISEQAE 321 Query: 301 GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDS 360 PA++P T+ E + A L+ + D D Sbjct: 322 AEAPASQP-----------------------TLTVAEVRRCPEALLQDNAILVLDQ--DQ 356 Query: 361 LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN 420 A++ GL+ A + A YIP+ D + K+ + Sbjct: 357 PSVYFADVHGLALAYQD-QAVYIPIEDVRQDEALLAYLA------------GEKTKIVYD 403 Query: 421 LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG 480 +K + G+ + G+ D M+ +++ +S + E++ +T+T +E+ GK Sbjct: 404 VKACLHLADGAGLTINGMKIDAMIAAFLCDSTLTSD--QKIREKFGLTETVTMDEVYGKP 461 Query: 481 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI 540 + + A+ + L P L++ + +++F ++EMPL VL ++ Sbjct: 462 GK---MKLPEPQLQRQLCAQKIQLIDALWKDSEPKLKEME-IVSLFYDVEMPLAAVLYKM 517 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK 600 E+ G++ID + L + + + RL L + AGE FN++S KQL +LF+K G+ Sbjct: 518 EKEGIRIDSQTLDDIARQTQARLDALTDAIYAAAGETFNINSPKQLGEVLFDKLGLPASG 577 Query: 601 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 K STS +VLE+L +P+ +LE+R KL STY + L I+P GR+HT Y+ Sbjct: 578 KKR----STSADVLEKLLGVHPIIADLLEFRKYQKLYSTYAEGLKKYIHP-DGRIHTIYN 632 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRD 720 Q T TGRLSST+PNLQNI VR+EE R +R+AF+ E V+V++DYSQIELR++AH++ + Sbjct: 633 QCATQTGRLSSTEPNLQNISVRDEESREVRKAFLPSEGNVLVASDYSQIELRMLAHMADE 692 Query: 721 KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 +GLL AF DIH TA++VF +PL+ V ++ RR AKA+NFG++YG+S FGL++QL+I Sbjct: 693 QGLLDAFRHAVDIHTKTASDVFQIPLDQVDAKHRRQAKAVNFGIVYGISDFGLSQQLDIS 752 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 R +A+++++ Y + YP + +YM++ + +E GY T+ GRR +P+I N R + Sbjct: 753 RAQAKEFIERYLQSYPNISKYMDQVISFCQEHGYTATMLGRRREVPEIHDKNYMTREFGK 812 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 RAA+NAP+QG+AAD+IK AMI +D + + + +MI+QVHDEL+F+ ++DA+ I Sbjct: 813 RAAMNAPIQGSAADLIKLAMIRIDKAISEKGLQSKMILQVHDELIFDALPSELDALCAII 872 Query: 901 HQLMENCTRLDVPLLVEVGSGENWDQA 927 + ME+ L VPL+ E G+ W +A Sbjct: 873 QEGMEHAMELKVPLVAETKIGDTWYEA 899 >UniRef50_C8PHS8 DNA polymerase I n=2 Tax=Campylobacter RepID=C8PHS8_9PROT Length = 938 Score = 893 bits (2307), Expect = 0.0, Method: Composition-based stats. Identities = 324/959 (33%), Positives = 497/959 (51%), Gaps = 63/959 (6%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 + ++D + +R Y+A L G+P+G + G + + +L ++K + D+KG Sbjct: 2 QTITIIDTFGFFFRLYYAMSGLKTKDGKPSGMVSGFASFIANLSKEFKSDYIIFALDSKG 61 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 KTFR ++ +YK++R P L Q+ M++ MGL L G EADD+I ++ ++ Sbjct: 62 KTFRSDIDPNYKTNRQAPPPALLQQLPVCIEMIEKMGLYSLGREGYEADDLIASVVKKY- 120 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDS 186 A + I T DKD+ QL+ N+ + + + G EE + +YGV PE I+DFLA+ GDS Sbjct: 121 GATHKINIVTSDKDLYQLIGENVKIYSHGKKMLYGREECLQRYGVYPEQIVDFLAICGDS 180 Query: 187 SDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLS 246 +DNIPGV G+G+K A+ LL G LD +Y+ +++ L + K+ AY+S Sbjct: 181 ADNIPGVRGIGDKGAKKLLDEWGSLDEIYSNLDRLPQN------KQREYLIEGKQSAYIS 234 Query: 247 YQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK------ 300 +LAT+ ++E+ + QQ ++ + K Y R + + + Sbjct: 235 KRLATLYDELEIPPLEDAKFPQQNPLFKIREILKDYALNRLLSALSLQEQNGLDLWGEGK 294 Query: 301 -------------------------------GAKPAAKPQETSVADEAPEVTATVISYDN 329 G A + + Sbjct: 295 GAGAKSSVLGAGGKGAGAESSRGGSILGAAVGGLDGQNSIPGGSACSEKNSESAFKTPFE 354 Query: 330 YVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDY 389 + I D L ++ + +FDTET S+D+ SA +VG SFA A Y+P+AH Y Sbjct: 355 PICITDAVELARLCESIDAETLVSFDTETTSIDSKSAKIVGFSFAFNEERAYYVPLAHSY 414 Query: 390 LDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANY-GIELRGIAFDTMLESYI 448 L AP QIS + A + L + VGQNLKYD I+ N IE DTM+ +++ Sbjct: 415 LGAPAQISSDAAKAAIDSLF---RGYVVGQNLKYDFEIVKNNFNIEPPARFADTMVLAWL 471 Query: 449 LNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQL 508 L+ A MDS++ R+L ++T+ F ++ KG+ TF + L+ A YA+EDA VTL+L Sbjct: 472 LDP-ANAVGMDSISPRYLGYETVHFGDVVKKGE---TFASVELDAATIYASEDAWVTLRL 527 Query: 509 HLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEK 568 + K+ L + + +E P V VL +++R G+KID +++ L L Sbjct: 528 YFKLKGLL--EPALFKLAQELEFPFVRVLWQMQRCGIKIDVEMIKRLIGRNEKSLRALTD 585 Query: 569 KAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVIL 628 + +E+ GE+FN++S QL +LFE+ G+ K+T G ST E VL++L +P IL Sbjct: 586 EIYELCGEQFNINSPAQLGAVLFERLGLPAAKRTKTG-YSTDESVLKDLTALHPAVGKIL 644 Query: 629 EYRGLAKLKSTYTDKLPLMINPK-TGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGR 687 +YR L KL+STY + L + RV +++ Q TATGRL+S +PNLQNIP R + Sbjct: 645 DYRELFKLQSTYCEPLLQLALADAQNRVRSNFLQTGTATGRLASKNPNLQNIPARGTFAK 704 Query: 688 RIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLE 747 +R F+A Y ++S DYSQIELR++AH SRD LL AF +DIH TA +FG Sbjct: 705 NVRDCFLAEGGYSLISLDYSQIELRLLAHFSRDPALLAAFRADEDIHARTAISIFG---- 760 Query: 748 TVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRA 807 R AK+INFGLIYGM A L+ L I R EA+ Y++ YF + + E+++ ++ Sbjct: 761 DAQPAHRTIAKSINFGLIYGMGAGKLSDSLGIARAEAKGYIERYFAAFSTIKEFLQSIKS 820 Query: 808 QAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWL 867 AK GYV TL GRR Y + N A+ ER A+N QG+AADIIK+AM+ + L Sbjct: 821 DAKADGYVSTLFGRRRYFDFANARNNMVYASYEREAVNTKFQGSAADIIKKAMVDISPLL 880 Query: 868 QAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 R+I+Q+HDEL+FEV D + ++M++ L+VPL + + W + Sbjct: 881 ---NGEARLILQIHDELIFEVRDDLAQGFGARAQEIMQSAASLNVPLKTSLNIAKRWGE 936 >UniRef50_UPI0001978038 DNA polymerase I n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI0001978038 Length = 913 Score = 893 bits (2307), Expect = 0.0, Method: Composition-based stats. Identities = 309/927 (33%), Positives = 517/927 (55%), Gaps = 24/927 (2%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 N L ++D + +R+++A PPL NS G PTG + G N+L+SL T+ A + G Sbjct: 2 NTLSVIDTFGFFFRSFYALPPLKNSQGFPTGLLVGFCNLLQSLYKDPSCTYIAFALEGGG 61 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 + R +++ YK++R P++LR Q+ + MG +++ G EADDV+ ++ + A Sbjct: 62 RNKRRDIYSEYKANRQAAPEELRLQLPIAIEWIAKMGFLNISIEGYEADDVVASINKVAN 121 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDS 186 V I + DKD+ QL+ N + + + + + + KYGV P+ ID+ +L+GDS Sbjct: 122 AQNITVRIISHDKDLYQLIDENTYIYDPIGKKDIKEAQCLQKYGVYPKNFIDYQSLVGDS 181 Query: 187 SDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLS 246 SDN+ GV G+G K+AQ L+Q G +++LYA +++ + +A +++ K+ A+LS Sbjct: 182 SDNVMGVKGIGAKSAQKLIQRFGSIESLYARIDEVESATT---PRIAKLIKEGKDNAFLS 238 Query: 247 YQLATIKTDVELELTCEQLEVQQPAA-EELLGLFKKYEFKRWTADVEAGKW--LQAKGAK 303 +L T+ ++ + + + + ++ +KYE K + +++ Q K A+ Sbjct: 239 KKLVTLYDNLLENIDLNKCLMPESNPMLKIFDELEKYELKNIISKIQSPYERYTQKKSAQ 298 Query: 304 PAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDN 363 + + + + E + E+++ + + + FD E+D LD Sbjct: 299 MGIGSLQGTQSPQNIESKKDEAFSFTPHLLDTLESVEFVLDSIPQGVRVGFDCESDGLDL 358 Query: 364 ISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKY 423 A LVG SF + A Y+PV H YL +Q++ + A + + +G NLK+ Sbjct: 359 QEAQLVGFSFCFDGKNAYYVPVGHRYLGVGNQLNLQEAKSAISRIFTHP---LIGHNLKF 415 Query: 424 DRGILAN-YGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 D ++ G+E G +D+M+ S++ +S+A +D +W H I+F+ + KG+N Sbjct: 416 DFSLIYRTLGLEHIGKIYDSMILSWLYDSIAPV-GLDKQMLKWFNHTMISFDSVVPKGEN 474 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKG--PLNVFENIEMPLVPVLSRI 540 F+Q+ + A +YAAEDA T +L+ ++ + K + L + +N+E P + VL + Sbjct: 475 ---FSQVNIITATQYAAEDAAATFKLYHRLEDEFHKREWGGILELAQNLEYPFIKVLMDM 531 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK 600 E G+++D +L ++ + +AEL +K +++ GE FNL+S +QL ILFE G+KP + Sbjct: 532 ELEGIRVDIGLLEILKDKSSEHIAELSQKIYDLCGETFNLNSPQQLAHILFENLGLKPGR 591 Query: 601 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLM-INPKTGRVHTSY 659 GG ST E+ L + +P+ +IL+YR KLKSTY + L + +T R+HTS+ Sbjct: 592 SVKGGL-STDEKTLLAIIDSHPVIDLILDYRESNKLKSTYIEPLLRLGRTNETHRIHTSF 650 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSR 719 Q TATGRLSS PNLQNIPVR EEGR+IRQAFI+ E + ++S DYSQIELR++AH + Sbjct: 651 LQNGTATGRLSSKSPNLQNIPVRREEGRKIRQAFISKEGHSLISIDYSQIELRLLAHFCK 710 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 D L+ +F + KDIH TAA +FG E ++R AK+INFGLIYGM + L++ L I Sbjct: 711 DPSLVESFMQDKDIHFETAARLFG---EQEAMQKRFIAKSINFGLIYGMGSKKLSQTLQI 767 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 P K+A++Y++ YF +P + +++ E GY +TL G R Y ++++ + Sbjct: 768 PLKQAKEYIESYFALFPTIKDFLNAQEEFLLENGYSQTLLGHRRYFDFKRATDFMKANF- 826 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 R IN+ QG+AAD+IK +M + +M++QVHDEL+FE + + AK+ Sbjct: 827 LREGINSIFQGSAADLIKLSMCEIHKRYAKSDL--KMLLQVHDELIFEAPSERAENYAKE 884 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWDQ 926 + +M + +L+VPL + G NW + Sbjct: 885 VADIMNSIYKLEVPLKCGIAIGTNWAE 911 >UniRef50_C1A095 DNA polymerase I n=60 Tax=Actinomycetales RepID=C1A095_RHOE4 Length = 915 Score = 891 bits (2304), Expect = 0.0, Method: Composition-based stats. Identities = 333/932 (35%), Positives = 488/932 (52%), Gaps = 53/932 (5%) Query: 6 QNPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + L+L+DG S +RA++A P +G+ T A+YG +ML +L+ +PTH A FD Sbjct: 25 RPLLMLLDGHSLAFRAFYALPAENFKTHSGQATNAVYGFTSMLINLLRDEQPTHLAAAFD 84 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 +TFR +LF YK+ R PD+ + QI+ ++ A+G+P++A G EADDVI TL Sbjct: 85 VSRQTFRADLFPEYKAQRAKAPDEFKGQIDITKDVLGALGIPVMAEEGFEADDVIATLTT 144 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPELIIDF 179 +AE G VL+ TGD+D QLVT N+T++ V KY + P DF Sbjct: 145 QAEALGYRVLVVTGDRDSLQLVTDNVTVLYPKKGVSELTRFTQTAVEEKYSLTPSQYPDF 204 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 AL GD SDN+PG+PGVGEKTA ++ G L L +K+ G + L +N Sbjct: 205 AALRGDPSDNLPGIPGVGEKTATKWIREYGDLQGLVDNVDKVRG-------KVGDSLREN 257 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 L+ QL + DV L T EQL + E++ LF EFK + A Sbjct: 258 LANVLLNRQLTEMVRDVPLPYTPEQLVLAPWDREKIHALFDDLEFKVLRDRLFATLSSSE 317 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 A+ + ++A + AW+ + T Sbjct: 318 PEAEEGFEVSGDALA---------------------PGAVAAWLDAHARTGERHGVTVLG 356 Query: 360 SLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQ 419 + + ++ L+ A G AYI + + + L D K Sbjct: 357 TRTPFAGDVTALAIAASDGECAYIAASTATPEDEAALG---------DWLADASQPKALH 407 Query: 420 NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 K+ L G L G+ DT L +Y++ ++D L+ R+LK + E +G+ Sbjct: 408 EAKWAIHALRGRGWTLGGLTSDTALAAYLVRPGQRSFNLDDLSLRYLKREL--RAETSGQ 465 Query: 480 GKNQLTFNQIALE-EAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLS 538 + L + L+ EA A A L L + +L+ + ++ ++E+PL L+ Sbjct: 466 EQLSLLDDTEQLDAEAAETAMLSAQAVLDLAAALDTELESIES-KSLLSDMELPLTIELA 524 Query: 539 RIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKP 598 +IE G+ +D LH+ ++A+ A+E+ ++ NL S KQLQ +LFE+ + P Sbjct: 525 QIEATGIAVDSAHLHDLQSRFASQVADAANSAYEVIDKQINLGSPKQLQVVLFEELDM-P 583 Query: 599 LKKTPGGAPSTSEEVLEELALD--YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVH 656 K +T E L+ L +P + +L +R ++K T D L + + GR+H Sbjct: 584 KTKKTKTGYTTDAEALQGLFDKTGHPFLEHLLAHRDATRMKVT-VDGLLKAV-AEDGRIH 641 Query: 657 TSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY-VIVSADYSQIELRIMA 715 T+++Q V ATGRLSSTDPNLQNIPVRN+ GR IR F+ + + V+++ADYSQIE+RIMA Sbjct: 642 TTFNQTVAATGRLSSTDPNLQNIPVRNDAGREIRDGFVVGQGFDVLLTADYSQIEMRIMA 701 Query: 716 HLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLAR 775 H+S D+GL+ AF G+D+H + FG+P+E VT E RR KA+++GL YG+SA+GLA Sbjct: 702 HVSGDEGLIEAFNTGEDLHSFVGSRAFGVPIEEVTPELRRRVKAMSYGLAYGLSAYGLAS 761 Query: 776 QLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGAR 835 QL I +EA++ MD YF R+ GV +Y+ QA++ GY TL GRR YLPD+ S N R Sbjct: 762 QLKISTEEAKQQMDAYFARFGGVRDYLHAVVEQARKDGYTSTLYGRRRYLPDLNSDNRQR 821 Query: 836 RAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDA 895 R AERAA+NAP+QGTAADIIK AMI V L + RM++QVHDELV EV +++ Sbjct: 822 REVAERAALNAPIQGTAADIIKVAMINVQKALAEAGLKSRMLLQVHDELVLEVVASELEE 881 Query: 896 VAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 V + M L VPL V VG+G +WD A Sbjct: 882 VTALVKDKMATAIELSVPLDVSVGTGRSWDSA 913 >UniRef50_B1BYY4 DNA polymerase I n=4 Tax=Bacteria RepID=B1BYY4_9FIRM Length = 873 Score = 891 bits (2303), Expect = 0.0, Method: Composition-based stats. Identities = 323/934 (34%), Positives = 491/934 (52%), Gaps = 71/934 (7%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAFPPL----TNSAGEPTGAMYGVLNMLRSLIMQYKPT 56 M ++ + L+L+DG+S LYRAY+A + N G PT A+YG NML +++ P Sbjct: 1 MDKMKE--LVLIDGNSLLYRAYYATAAMGNLMVNKDGIPTNAVYGFANMLENILKG-NPE 57 Query: 57 HAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADD 116 + V FD KTFR++LFE YK R PD+L Q + + A G+ + G E DD Sbjct: 58 YIVVAFDYGKKTFRNDLFEVYKGTRSATPDELVCQFSMIREYLTAHGIHYQEIEGYEGDD 117 Query: 117 VIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVP 172 VIGT+A A K V I T DKDM QLV N+++ T + PE+ YG+ Sbjct: 118 VIGTIASIASKKRFKVSIVTSDKDMLQLVDDNVSVYLTKKGVAELEKITPEKFKEMYGLI 177 Query: 173 PELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTM 232 P+ + D LMGD +DNIPG+PGVGEKTA LL+ ++ L +++ G M Sbjct: 178 PDQMRDLKGLMGDKADNIPGIPGVGEKTALKLLKQYHTIENLNDHLDELKG-------KM 230 Query: 233 AAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVE 292 K+ N + LS ++ATI DV +EL + Q EL +++Y + Sbjct: 231 GEKIRDNIDQGLLSKKIATIIKDVPMELDLDDFYYQGFDYNELAEFYRRYNMNSLLKRMS 290 Query: 293 AGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVF 352 T++D + + + + Sbjct: 291 LANEDNKGE------------------------------TVIDVKIVDCLPIIKRDSSIV 320 Query: 353 AFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDE 412 ++ + + +VG + A YI + + + + + DE Sbjct: 321 VGVFDS---NYHRSLIVGFAI-YNNSEAYYIDIEN-----------AIKCQNFQNFINDE 365 Query: 413 KALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTIT 472 K G ++K +G+E++ FD L SYILN ++ S+ E + + + Sbjct: 366 SIEKYGYDIKKCINAAKWHGLEIKNYVFDLQLASYILNPSLKD-EIRSVCEYYDYYDVLY 424 Query: 473 FEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMP 532 EE+ GKG + A+ + + A L K L++ ++++++EMP Sbjct: 425 DEEVYGKGAKKKIPETTAI---ADHLIKQAKAIYVLKDKAIEKLKQE-NQFDLYKDVEMP 480 Query: 533 LVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFE 592 + +L+ +E G KID VL + + + LEK+ H++A + FN++S KQL +LFE Sbjct: 481 VAKILASMEYQGAKIDKDVLKDLENQFGKEIEVLEKEIHQLANKNFNIASPKQLGEVLFE 540 Query: 593 KQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKT 652 G+ KKT G STS ++L +L +P+ +L+YR L+KL STY L I Sbjct: 541 DLGLPNGKKTKTG-YSTSVDILNKLKDVHPIINKVLQYRTLSKLYSTYIIGLQEQIFV-D 598 Query: 653 GRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELR 712 G++HT Y+QA+T TGRLSSTDPNLQNIPV+ EG+ IR+AFI DY +VS DYSQIELR Sbjct: 599 GKIHTIYNQALTQTGRLSSTDPNLQNIPVKTAEGKLIRKAFIPEYDY-LVSFDYSQIELR 657 Query: 713 IMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFG 772 ++AHL+ K L+ AF E KDIHR TA+E+FG+ + V S RR+AKA+NFG+IYGMS FG Sbjct: 658 VLAHLANVKSLIKAFNEDKDIHRHTASEIFGVDEDEVDSTMRRNAKAVNFGIIYGMSDFG 717 Query: 773 LARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSN 832 LA Q+ +P EA+ ++ YFE YP + YM+ K+ GYV T+ R+ ++ +I N Sbjct: 718 LAEQVGVPVNEARNFIKRYFENYPEIKTYMDNNIEFCKKNGYVTTMLNRKRFIREINEKN 777 Query: 833 GARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDD 892 R+ +R A+N+P+QG+AADIIK AMI VD + + +MI+QVHDEL+F+V+K++ Sbjct: 778 YMRQELGKRLAMNSPIQGSAADIIKVAMIKVDELFKKHNLKSKMILQVHDELIFDVYKEE 837 Query: 893 VDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 ++ V + + + M +++V L E NW + Sbjct: 838 LEEVMEVVAKGMTTAVKMNVELKSEGSYAINWYE 871 >UniRef50_C4LIB4 DNA polymerase I n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LIB4_CORK4 Length = 925 Score = 890 bits (2300), Expect = 0.0, Method: Composition-based stats. Identities = 333/955 (34%), Positives = 505/955 (52%), Gaps = 67/955 (7%) Query: 2 VQIPQNPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAA 59 V+ + L+L+DG S +RA++A P T+S+G+ T A+YG ++ML +L+ Q KPTH+A Sbjct: 7 VEDTKKKLLLLDGHSLAFRAFYALPADKFTDSSGQHTNAVYGFISMLVTLLEQEKPTHSA 66 Query: 60 VVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIG 119 FD G TFR E F YK+ RP P + + QIE + ++ G+ + EADDVI Sbjct: 67 AAFDLAGPTFRSEKFADYKAQRPETPPEFKGQIELIRQALETFGITTVDYKRYEADDVIA 126 Query: 120 TLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPEL 175 TLA + + G I TGD+D QLVT ++T++ T+ PE V KYGV P Sbjct: 127 TLATQGHEQGFDTYICTGDRDSLQLVTDDVTVLYTLRGVSNLARFTPEAVEEKYGVTPTQ 186 Query: 176 IIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAK 235 D AL GD+SDN+PGVPGVG KTAQ + G L L + I G + Sbjct: 187 YPDLAALRGDTSDNMPGVPGVGPKTAQKWINKYGSLSNLIDNIDDIGG-------KVGDA 239 Query: 236 LEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGK 295 L ++ + + +L + D+ ++ + E E++ A ++ F +F + Sbjct: 240 LRRDIDTVIQARELTEMVRDLPIKCSPEDCEIRPSARNDVNDFFDDVQFGMNLRERVFSV 299 Query: 296 WLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFD 355 G+ A +E + V + T + A +KL Sbjct: 300 IPTQGGSSDAGNHRERVSYERVGLQKGKVRHWLEEATDHTPAGIAALGSKL--------- 350 Query: 356 TETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKAL 415 S N+ L+ + A I ++ D D + K L+D Sbjct: 351 -------PSSPNMKALAI-TQGKQTAIINMSRTTDDDRDAL---------KEWLQDPDHP 393 Query: 416 KVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKT----- 470 V + K +L++ G+ I DT L SY+++ G D++S+ R L Sbjct: 394 IVVHDGKGLLHMLSSEGLTATNIEHDTRLASYLIHPDFGSFDLESVVRRRLGRDLYDSDV 453 Query: 471 ITFEEIAGKGKN--------------QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDL 516 +++EE G+ + I+ E + A+ A+ L+L ++ L Sbjct: 454 VSWEEEHRSGRQMSLDVGDLSSDGDDDRSVAGISWPEWAK-LADHAEAPLELAEELAKKL 512 Query: 517 QKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIA-G 575 K G +++EN+E+PLVP+L +ER G+K++ + + + +LA+ ++A + Sbjct: 513 DKA-GLYSIYENLEIPLVPILFGMERAGIKVNRERMTALRDSTAEKLAKEVEEARALVDM 571 Query: 576 EEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYP--LPKVILEYRGL 633 + NL S KQLQ +LF+K + KKT G ST+ + +E LA +P +L +R Sbjct: 572 PKLNLGSPKQLQEVLFDKLELSKTKKTKTG-YSTAAKAIERLAEKHPHPFLDHLLAHREY 630 Query: 634 AKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAF 693 K ST D L I GR+HT+++Q TATGRLSSTDPNLQNIPVR EEGR+IR AF Sbjct: 631 QKRVST-LDGLIKAI-ASDGRIHTTFNQTATATGRLSSTDPNLQNIPVRTEEGRQIRAAF 688 Query: 694 IAPEDYV-IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSE 752 + E Y +++ADYSQIE+R+MAH S+D+GL+ A+ G+D+H ++VF +P+ VT E Sbjct: 689 VPGEGYEALLTADYSQIEMRVMAHFSQDRGLIEAYRSGEDLHNFVGSQVFDVPVNEVTPE 748 Query: 753 QRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQ 812 RR KA+++GL+YG+S +GL++QL+I +EA+K M YFER+ GV Y+ +A++ Sbjct: 749 LRRRVKALSYGLVYGLSEYGLSQQLDISVREAKKIMVKYFERFGGVRRYLNEVVDRARKD 808 Query: 813 GYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQP 872 Y T+ GRR YL D+ S N R AERAA+NAP+QGTAADIIK AMI VDA L+ E+ Sbjct: 809 EYTSTMLGRRRYLSDLASLNRQARENAERAALNAPIQGTAADIIKVAMIRVDAALKKEKL 868 Query: 873 RVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 R+++QVHDEL EV +++ V I + M+ L VPL V + G +W++A Sbjct: 869 ASRVLLQVHDELDVEVANGELEQVRGIIQREMDEAIELAVPLEVGMAVGADWNEA 923 >UniRef50_B0MR22 DNA polymerase I n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MR22_9FIRM Length = 829 Score = 886 bits (2291), Expect = 0.0, Method: Composition-based stats. Identities = 308/923 (33%), Positives = 468/923 (50%), Gaps = 99/923 (10%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 +++DG+S L RA++ LTNS G T A+ G +N L L P AV FD K T Sbjct: 3 FLIIDGNSILNRAFYGIRVLTNSRGVATNAVTGFMNTLLMLEKDVNPDMIAVAFDLKALT 62 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR ++++ YK++R MP+DL Q+ + ++ AMG+ ++ G EADD+IGT++ Sbjct: 63 FRHKMYDGYKANRKGMPEDLAQQLPYMKKIITAMGITIIEKEGFEADDIIGTVSAACADK 122 Query: 129 GRPVLISTGDKDMAQLVTPNITLI--NTMTNTILGPEEVVNKYGVPPELIIDFLALMGDS 186 P +STGD+D QLV +T+ T + P+ ++ +YGV P+ +I+ ALMGDS Sbjct: 123 KIPCTVSTGDRDSFQLVNDYVTVRLAKTKGDIYYTPDVIMEEYGVTPKQMIEVKALMGDS 182 Query: 187 SDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLS 246 SDNIPGVPG+GEKTA +L++ +D +Y S K + KLE KE Y+S Sbjct: 183 SDNIPGVPGIGEKTALSLIKEFASVDGVYENI-----GSTLITKGVRTKLENGKESCYMS 237 Query: 247 YQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAA 306 QLA I ++ ++ EL L + E + ++ G Sbjct: 238 RQLAEICLTAPIDTELSHYVPKERDDAELARLLSELEMYKMLQKLKLHPTSAPTG----- 292 Query: 307 KPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISA 366 +E L+ AK A A D + A Sbjct: 293 ----------------------------SKEALEESAAKQIPAMP-AGDIVLTQEGGVYA 323 Query: 367 NLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRG 426 VG AP ++S D + K ++K Sbjct: 324 GTVG---------------------APVKLSDVELKAY-----ADSDSTKYTFDIKETLT 357 Query: 427 ILANYGIE-LRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLT 485 + G E L+ FDT L +Y+ + + + + L ++ + + +E Sbjct: 358 V---TGCERLKNNRFDTTLAAYLADPDSNDYSLSRLCAQYGVPEGNSIQE---------- 404 Query: 486 FNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGV 545 + L+ + + + G V +IE+PL VL +ER GV Sbjct: 405 ---------------KSITVAALNDILNCKISET-GSAAVLTDIEIPLATVLVAMEREGV 448 Query: 546 KIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGG 605 ID + +E+ + ++ ++ +E AG EFN+ S KQL ++LFEK + KKT G Sbjct: 449 SIDADGIKAFGKEVCEKAEKISREIYEYAGYEFNIGSPKQLGSVLFEKLALPSAKKTKTG 508 Query: 606 APSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTA 665 ST+ +VLE L +P+ +I EYR L KL++TY L + + GR+H+++ Q T Sbjct: 509 -YSTNADVLESLMDKHPIVPLITEYRALTKLQNTYVTGLLK-VVGEDGRIHSTFKQTETR 566 Query: 666 TGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLT 725 TGR+SS +PN+QNIPVR GR +R+ F A + ++V ADYSQIELR++AH+S D+ + Sbjct: 567 TGRISSAEPNIQNIPVRTPLGREMRRFFTAKDGCLLVDADYSQIELRVLAHISGDEIMKK 626 Query: 726 AFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQ 785 AF +G DIH TA++VF P+E VT + R AKA+NFG++YG+ AF L++ + + +A Sbjct: 627 AFLDGVDIHTVTASQVFNQPIEWVTPDLRSKAKAVNFGIVYGIGAFSLSKDIGVSVPKAS 686 Query: 786 KYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAIN 845 +Y+ Y +Y G+ YME+T A+AK GYVET+ GRR Y+ ++ + N +A ER A N Sbjct: 687 EYIRSYLSKYSGIAHYMEQTVAKAKRDGYVETMFGRRRYIKELAAKNKNLQAFGERVAKN 746 Query: 846 APMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLME 905 P+QGTAADIIK AMI V L+ R+I+QVHDEL+ E +D + VA + + ME Sbjct: 747 TPIQGTAADIIKIAMIKVYNRLKESGLDARLILQVHDELIVEAKEDCAEKVALLLKEEME 806 Query: 906 NCTRLDVPLLVEVGSGENWDQAH 928 N +L VP+ V+V G+ W H Sbjct: 807 NAVKLTVPMTVDVNIGKTWYDTH 829 >UniRef50_Q1II21 DNA polymerase I n=2 Tax=Acidobacteria RepID=Q1II21_ACIBL Length = 929 Score = 885 bits (2288), Expect = 0.0, Method: Composition-based stats. Identities = 328/947 (34%), Positives = 491/947 (51%), Gaps = 79/947 (8%) Query: 7 NPLILVDGSSYLYRAYHAF---PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + L+D +++RAYHA P++ G PT A Y +NML L + P H A + Sbjct: 33 GRVFLIDTFGFVFRAYHAMARQRPMSTKTGIPTSATYVFVNMLNKLRQDFAPEHIAAIM- 91 Query: 64 AKGKTFRDEL---------------------FEHYKSHRPPMPDDLRAQIEPLHAMVKAM 102 GKTFRDE + YK++R MP+DL Q+ + + A Sbjct: 92 EGGKTFRDEEAAAVATINKFDIKTQTFQEIAYGGYKANRTEMPEDLTQQMPYIERALNAY 151 Query: 103 GLPLLAVSGVEADDVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTIL-G 161 +P+++ G EADDVIGTLA++A G PV I + DKDM QLVT + ++N + ++ Sbjct: 152 RIPMISAEGFEADDVIGTLAKKAADGGYPVYIVSSDKDMMQLVTERVCILNPPKDNLICD 211 Query: 162 PEEVVNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKI 221 P++V GVPPE ++D +AL GDS DN+PG PG+G+K + L+Q G ++ ++ Sbjct: 212 PKKVEEILGVPPERVVDVMALRGDSIDNVPGAPGIGDKGSVQLIQRFGTVEAALDHAGEV 271 Query: 222 AGLSFRGAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKK 281 +K L+QN++ S ++ TI+TD+++ + + Q P E LF + Sbjct: 272 E------SKRQRESLQQNRDAVLFSKRMVTIRTDIDMPFEPQAMRAQDPDYEACKALFAE 325 Query: 282 YEFKRWTADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKA 341 EF + + S + + + V I + Sbjct: 326 LEFNN----LLKQFLTEGSEVGETDYADAKSTDEIKALLRDVNADHPLAVAIAHLDAPSL 381 Query: 342 WIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERA 401 + E + + + ++ + G A + + + Sbjct: 382 AAEEAEPEEDAPQLALAMAEPVATPQVTSVALSSREGAARAVELKGESG----------- 430 Query: 402 LELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSL 461 E+++ L D K + K G+ L + DTML Y+L+ + + + Sbjct: 431 -EVVRRALADPTVPKAVHDAKAAMHA----GLPLESVEHDTMLYEYLLDPTYTTYRLPDV 485 Query: 462 AERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKG 521 R L K E AD+T +L K+ L + G Sbjct: 486 VLRRLNLKL------------------------AGTLPEAADMTHRLTTKL-HKLVEDGG 520 Query: 522 PLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLS 581 + V+E+I+ PLV VL +E GVK+D VL S L L +K + ++G+EFN++ Sbjct: 521 LMKVYEDIDRPLVTVLYAMEAAGVKLDCDVLAEMSTRLQRDADALARKIYGLSGQEFNIN 580 Query: 582 STKQLQTILFEKQGIKPLKKTPGGAP-STSEEVLEELALDYPLPKVILEYRGLAKLKSTY 640 S KQL +LF K + K G ST+ +VLE LA ++ +PK++LEYR KLKSTY Sbjct: 581 SPKQLGDVLFNKLNLPKPVKYGKGKTISTAVDVLEGLAGEHEVPKLVLEYRQFTKLKSTY 640 Query: 641 TDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYV 700 D LP + + TGR+HT++ QA T+TGRLSS +PNLQNIP+R E GR IR AF+A + V Sbjct: 641 VDALPNLCHAGTGRLHTTFAQAATSTGRLSSVNPNLQNIPIRTELGREIRAAFVAEKGNV 700 Query: 701 IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAI 760 +++ADYSQIELR++AH S+D+ L+ A+ +DIH TA+EVFG+P + +E RR AKA+ Sbjct: 701 LLAADYSQIELRLLAHFSQDRLLVDAYNNDRDIHALTASEVFGVPPMMIDAEHRRRAKAV 760 Query: 761 NFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDG 820 NFG++YG+S FGL++QL I KE+++Y++ YFERY GV E++ Q ++ V TL G Sbjct: 761 NFGIVYGISPFGLSQQLGIDTKESKRYIESYFERYSGVREWLNSVLEQVRKDEKVSTLFG 820 Query: 821 RRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQV 880 R +PDI S N R AER A N P+QGTAAD+IK AMI + L + + RM++QV Sbjct: 821 RIRPIPDIHSRNPNLRGFAERTATNTPLQGTAADLIKLAMIRIHRDLIERKLKTRMLLQV 880 Query: 881 HDELVFEVHKDDVDAVAKQIHQLMENC-TRLDVPLLVEVGSGENWDQ 926 HDELVFEV + +V+ V + MEN L VPL V+VG G+NW Sbjct: 881 HDELVFEVPQAEVEEVRALVQDRMENVHPELTVPLKVDVGVGKNWRD 927 >UniRef50_Q2JCJ5 DNA polymerase I n=10 Tax=Actinomycetales RepID=Q2JCJ5_FRASC Length = 945 Score = 884 bits (2285), Expect = 0.0, Method: Composition-based stats. Identities = 335/932 (35%), Positives = 482/932 (51%), Gaps = 53/932 (5%) Query: 5 PQNPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 L+L+DG S YRA++A P + + G+PT A+YG +ML +++ +PTH AV + Sbjct: 56 ATPRLLLLDGHSLAYRAFYALPVENFSTTTGQPTNAVYGFTSMLINVLRDERPTHVAVAW 115 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 D TFR + YK+ R P D Q+ +H + A+ +P ++ G EADDVI TLA Sbjct: 116 DLPTPTFRHTQYAEYKAGRGETPADFVGQVSLIHQVCDALAVPGVSAPGYEADDVIATLA 175 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIID 178 G VL+ TGD+D QLV +T++ T P+EV KYG+ P D Sbjct: 176 TLGAAEGMDVLVVTGDRDALQLVDERVTVLMTRKGISDMVRFTPDEVQAKYGLSPVQYPD 235 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 F AL GD SDN+P VPGVGEKTA +Q G L L ++I G A L Sbjct: 236 FAALRGDPSDNLPSVPGVGEKTATKWIQQFGSLAELVDHADEIGG-------KTGASLRA 288 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 + + L + DV L++ L ++ E + LF +F+ + A + Sbjct: 289 HLSEVIRNRSLTELSRDVPLDVVPAGLRMRPWDREAVHQLFDTLQFRVLRERLYAALAIA 348 Query: 299 AKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTET 358 A + + +T+L + W+A+ A Sbjct: 349 PPPADEGFEIE---------------------LTVLGPGEVARWLAE------HAHRVGR 381 Query: 359 DSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVG 418 L G + G+A P ++ L L D K Sbjct: 382 TGLHAR--GTWGRGTGVLAGLALAAAGGAAAWIDPTLLTPADV-AALGAWLADPNQPKAA 438 Query: 419 QNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAG 478 ++K L + L G+ DT L +Y+ D+ L R+L + + + G Sbjct: 439 HDVKGPMLALTELDLPLAGVTSDTALAAYLALPGQRSFDLADLVARYLHRDL-SADPVPG 497 Query: 479 KGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLS 538 QLT + + A A L+L + DL++ + + +IE+PLV VL+ Sbjct: 498 --GQQLTLDGSGEADQAHADAVRARACLELADALDADLER-RSAATLLRDIELPLVTVLA 554 Query: 539 RIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKP 598 +ER G+ +D + L + ++ + +AHEI G FNL S KQLQ ILF++ G+ Sbjct: 555 GMERAGIAVDSEHLTELQKHYGGEVSAVAAQAHEIVGRPFNLGSPKQLQQILFDELGLPK 614 Query: 599 LKKTPGGAPSTSEEVLEELA--LDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVH 656 KK G +T + L LA D+PL V+L +R +A+LK T D L MI+ GR+H Sbjct: 615 TKKIKTG-YTTDADALAWLAVQSDHPLLPVLLRHRDVARLK-TVVDSLIPMID-DIGRIH 671 Query: 657 TSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY-VIVSADYSQIELRIMA 715 T+++Q + ATGRLSS DPNLQNIP+R EGR+IR+AF+ Y +++ADYSQIE+RIMA Sbjct: 672 TTFNQTIAATGRLSSADPNLQNIPIRTAEGRQIRRAFVVGAGYETLLTADYSQIEMRIMA 731 Query: 716 HLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLAR 775 HLS D+GL+ AF G+D+H AAE FGLP+ V E RR KA+++GL YG+SAFGLA Sbjct: 732 HLSGDEGLIEAFGSGEDLHTFVAAEAFGLPVSEVDPELRRRIKAMSYGLAYGLSAFGLAG 791 Query: 776 QLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGAR 835 QL I EA+++MD YF R+ GV +++ +A++ GY ET+ GRR YLPD+ S N R Sbjct: 792 QLGIAPDEAREHMDAYFARFGGVRDFLRGVVERARKDGYTETILGRRRYLPDLTSDNSQR 851 Query: 836 RAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDA 895 R AER A+NAP+QG+AADIIK AM+ VD L A R+++QVHDELV E+ + DA Sbjct: 852 RQMAERMALNAPIQGSAADIIKIAMLGVDRALCAGGYASRLLLQVHDELVLEIAPGEHDA 911 Query: 896 VAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 V + + M + + VPL V VG+G WD A Sbjct: 912 VERLVRAEMTSAYTMSVPLDVSVGAGCTWDDA 943 >UniRef50_B6G9J6 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6G9J6_9ACTN Length = 932 Score = 884 bits (2284), Expect = 0.0, Method: Composition-based stats. Identities = 343/943 (36%), Positives = 507/943 (53%), Gaps = 49/943 (5%) Query: 9 LILVDGSSYLYRAYHAFPP-LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 + ++DG+S ++RA+HA PP + G PT A++G LNM ++ ++ P FD Sbjct: 14 IAVIDGNSLMHRAFHAVPPTMNAPDGSPTNAVFGFLNMFLKMVDEFSPDGVVCAFDKGHP 73 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 R E+ YK+ RPPM +LRAQ + ++ ++ +P++ + G E DD++GTLAR E Sbjct: 74 KVRMEMLPQYKAQRPPMDPNLRAQFPMIKELLASLSVPVVELEGWEGDDILGTLARRGEA 133 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKY-GVPPELIIDFLAL 182 AG + + TGD+DM QLVT ++ +++T I+ PE V + Y G+ PEL+ DF L Sbjct: 134 AGCDMYLVTGDRDMYQLVTDHVHVVSTRKGLSDIAIMTPESVDDLYHGITPELVPDFYGL 193 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 GDSSDNIPGVPG+G K A AL+ G LD + A +++ G M L + + Sbjct: 194 KGDSSDNIPGVPGIGPKKASALIVQYGSLDEVIAHADEVKG-------KMGESLRAHIDD 246 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 A +S ++ATI TD +E +++ A + A A Sbjct: 247 ALVSRKIATIMTDAPVECDLDEVSFPAYDAASVSAALGALGIMAMQNRFLALLGDAAASQ 306 Query: 303 KPAAKPQET-----SVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTE 357 +K + S+ A + +E ++A A D E Sbjct: 307 AAVSKLELPEVLRVSLDASRAFDEAESNRESAEMNACFDELMRALEAGEWLGVAMEDDKE 366 Query: 358 TDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKV 417 D+L ++ L ++ P+ + A D + + LL + V Sbjct: 367 ADALFGMTRRL--WVATDRALLSFEEPIGPCGVFATDIDCSHGVIPGVLGLLFAKG-SVV 423 Query: 418 GQNLKYDRGILA---NYGIEL-------RGIAFDTMLESYILNSVAGRHDMDSLAERWLK 467 ++K +L+ + EL FDT++ +Y+L+SV LAE +L Sbjct: 424 SSDVKALLHVLSPVDSSEPELMDPLDADPARLFDTVVAAYLLDSVRSDFADAHLAETYLH 483 Query: 468 HKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFE 527 G + + + + L + L + +G ++F Sbjct: 484 AALPAAAGEDGAPADAPSAAARSA-----------WLARILREPLAAAL-EAQGAEDIFT 531 Query: 528 NIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAG-EEFNLSSTKQL 586 IEMPLV VL+ +ER G+ +DP L SEEL+ ++AEL + E+AG EEFNLSS QL Sbjct: 532 KIEMPLVRVLASMERAGMYVDPARLAAQSEELSGQIAELSDRIRELAGGEEFNLSSPMQL 591 Query: 587 QTILFEKQGIK--PLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKL 644 +LF+K G+ LKKT G ST+ +VLE+LA DY + ++ILEYR K+KSTY D L Sbjct: 592 SRVLFDKLGLPTAGLKKTQRGYYSTNAKVLEDLAKDYEIVRLILEYRERTKIKSTYLDTL 651 Query: 645 PLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSA 704 + GRVHT+Y+Q +TATGRLSS++PNLQNIP R+E G +++AF E V V+ Sbjct: 652 GAL-RETDGRVHTTYNQTITATGRLSSSNPNLQNIPTRSELGHAVKKAFSVEEGSVFVAI 710 Query: 705 DYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGL 764 DYSQIELR++AHLS D+ L+ AF EG+D H TAA VFG+P+E VT + R AKA+NFG+ Sbjct: 711 DYSQIELRLLAHLSGDEHLVGAFNEGEDFHAETAARVFGVPVEEVTPQLRSRAKAVNFGI 770 Query: 765 IYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLY 824 +YG A+GL++ L+IP EA++ +D YF YPGV Y++ T A AK+ GY ET+ GRR Sbjct: 771 VYGQQAYGLSQALDIPMAEAREMIDAYFRAYPGVRTYLDETVAFAKQTGYAETMYGRRRP 830 Query: 825 LPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDEL 884 +P+++ A+R ER A+N PMQG+AADIIK AM+ V L+ E +MI+QVHDEL Sbjct: 831 IPELRVP--AQRMFGERTAMNHPMQGSAADIIKIAMVRVAERLRTEGFAAKMILQVHDEL 888 Query: 885 VFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 FE +VDA+ + + ME +L VPL+ + GE W +A Sbjct: 889 DFECPVGEVDALVAMVREEMEGVAQLRVPLIADASVGETWAEA 931 >UniRef50_D0WFK8 DNA polymerase I n=2 Tax=Coriobacteriaceae RepID=D0WFK8_9ACTN Length = 905 Score = 883 bits (2283), Expect = 0.0, Method: Composition-based stats. Identities = 347/948 (36%), Positives = 493/948 (52%), Gaps = 66/948 (6%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPPLTNS-AGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 +P+ + ++DG+S ++RAYHA PP N+ G PT A +G ++ML +P F Sbjct: 1 MPR-TIAVIDGNSLMHRAYHAVPPTMNAVDGTPTNAAFGFMSMLLKFYEDARPDAIVCAF 59 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 DA T R E + YK+ RPPM D+LR Q + ++ AMG+P++ V G E DD++GT+A Sbjct: 60 DAGKPTHRIEAMKAYKAQRPPMDDELRVQFPVIEGLLDAMGIPVVKVKGWEGDDILGTIA 119 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIID 178 E G L+ TGDKD QLV+ + ++ T I GP+EV+ +YGV D Sbjct: 120 ARDEALGWNTLLVTGDKDAYQLVSDHTRVVTTRKGITDVVIYGPDEVLERYGVTAAQFPD 179 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 FL L GD++DNIPGVPG+G KTA LLQ G +D +Y +K+ G L Sbjct: 180 FLGLQGDTADNIPGVPGIGPKTATKLLQAYGSMDGIYKNLDKLKG-------KQLQNLAD 232 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 N++ AYLS LA I D++ EL E AA + F +F A V A + Sbjct: 233 NRDQAYLSRDLAVIVQDLDFELDLESAAFPSFAASAVAEAFGAVQFSSHLARVLALIGGE 292 Query: 299 AKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTET 358 G P+A E D A A + L+AW+A A E Sbjct: 293 --GDLPSAASIELPDIDPATGDAARAL-------------LEAWLAPRADAVPSMLADEG 337 Query: 359 DSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKP----LLEDEKA 414 + + + E A++ HD + ++ + +++ L+ + Sbjct: 338 ALVLGVEVVEPAQASLFESACIAFVSDGHDVVRFENEDAIAAVARIVRDGCFCTLDAKAT 397 Query: 415 LKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFE 474 ++ R L AFD L +Y+L S A +D +L E +L F+ Sbjct: 398 MQRAYPPDSSREAFVAPAELLSARAFDIGLSAYLLQSNASSYDYATLCEEYLAASLPAFD 457 Query: 475 EIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQ-------------KHKG 521 + A A A V +L + + + G Sbjct: 458 D------------------ACDEACAHAFVAPRLARALDGAMACDAEEASPDGTSGRSVG 499 Query: 522 PLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLS 581 + + +I++PLVPVL+ +ER G +ID L + + + + E+AGEEFNL Sbjct: 500 TRSCYYDIDLPLVPVLAVMERVGARIDVDALAEMGRSVAEEIDGIRTRVFELAGEEFNLD 559 Query: 582 STKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYT 641 S KQL +LFEK G+ KKT G ST + L +L +P+ + IL YR LAK++STY Sbjct: 560 SPKQLSVVLFEKLGLPHGKKTQRG-YSTDAKTLSKLEDVHPIAREILRYRELAKMESTYI 618 Query: 642 DKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYV 700 + LP M G VHT ++Q VT TGRLSS+DPNLQNIPVR E GRRIR F+ + Sbjct: 619 EALPRM-RAGDGLVHTHFNQTVTTTGRLSSSDPNLQNIPVRTEFGRRIRGCFVPLRTGDL 677 Query: 701 IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAI 760 +SADYSQIELR++AHLSRD+ L+ AF G D H +TAA VFG+PLE VT R AKA+ Sbjct: 678 FMSADYSQIELRLLAHLSRDEHLVHAFCSGADFHASTAARVFGVPLEEVTPSMRSRAKAV 737 Query: 761 NFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDG 820 NFG++YG AFGLA+ L I KEAQ+ +D YFE YPGV +++ T + + GY T+ G Sbjct: 738 NFGIVYGQQAFGLAQNLGIGFKEAQEMIDRYFEAYPGVRAFLDGTVEEVRACGYATTMFG 797 Query: 821 RRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQV 880 RR ++P++K+ N A+R ER A+N PMQG+AADI+K AM V L ++++QV Sbjct: 798 RRRHIPELKAKNPAQRGFGERTAMNHPMQGSAADIVKMAMNEVQRRLVDGGFAAQVMIQV 857 Query: 881 HDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 HDEL V ++DAV + M N L+VPL+V+V S + W +AH Sbjct: 858 HDELDLSVPVSELDAVGALVRDAMTNVVTLEVPLIVDVQSAKTWAEAH 905 >UniRef50_D0L9T3 DNA polymerase I n=2 Tax=Corynebacterineae RepID=D0L9T3_GORB4 Length = 949 Score = 882 bits (2280), Expect = 0.0, Method: Composition-based stats. Identities = 329/968 (33%), Positives = 490/968 (50%), Gaps = 89/968 (9%) Query: 6 QNPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + L+L+DG S YRA+ A P + G+ T A+YG +ML +L+ +PTH A FD Sbjct: 23 KPVLMLLDGHSLAYRAFFALPAENFKTATGQTTNAVYGFTSMLINLLRDEEPTHIAAAFD 82 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 KTFR E++ YK+ R PD+ Q++ ++ A+G+P++A+ G EADD+I TLA Sbjct: 83 VSRKTFRSEMYPAYKAQRSKSPDEFNGQVDLTKEVLDALGIPVMAIEGYEADDIIATLAT 142 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPELIIDF 179 +A+ G VL+ TGD+D QLV ++T++ P EV KYG+ P D+ Sbjct: 143 QADAEGYSVLVVTGDRDSLQLVNDSVTVLYPRKGVSELTRFTPAEVEKKYGLTPTQYPDY 202 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 AL GD SDN+PG+PGVGEKTA ++ G L +L +++ G + L N Sbjct: 203 AALRGDPSDNLPGIPGVGEKTASKWIREYGSLASLVDHVDEVKG-------KVGDALRAN 255 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 + QL + D++L ++L + + + LF EF+ + Sbjct: 256 LASVQTNRQLTELVRDMQLPAGPDELAMVGWDRDRIHQLFDDLEFRVLRDRLF------- 308 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 +A P+ S D +L + ++AW+A+ T Sbjct: 309 -STLSSATPEAESGFDLDGA-------------VLGQGEVRAWLAEHAGTGRSGLAV-TA 353 Query: 360 SLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQ 419 + A+ GL+ A G +AY+ V D ++ L D K Sbjct: 354 PHVVVGADPTGLAIAAADGTSAYVDVTAVDADDEQALA---------DWLADPAMGKALH 404 Query: 420 NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 +K+ L + G L G+ DT L +YI+ ++D LA R+L+ + ++ +G Sbjct: 405 EVKWGIHALRSRGWTLAGVTSDTSLAAYIVRPGQRTFNLDDLALRYLRREL-RADDGSGD 463 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 G+ L + + +A ++L + +L + + +E+PL VL+ Sbjct: 464 GQLSLLDDDGGAAKLAEQHMLEARAVVELAEVLDTELDRIDSL-PLLTEMELPLAFVLAD 522 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 +E G+ +D + R+ A+++ GE+ NL S KQLQT+LF+K + P Sbjct: 523 LEAAGIAVDVDHFGELEKNFAQRIRVAANAAYDVIGEQINLGSPKQLQTVLFDKLDM-PK 581 Query: 600 KKTPGGAPSTSEEVLEEL--ALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHT 657 K +T + L+ L ++P +LE+R +LK T D L + GR+HT Sbjct: 582 TKKTKTGYTTDADALQALYEKTEHPFLAHLLEHRDATRLKVT-VDGLLKSV-ADDGRIHT 639 Query: 658 SYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA---------------------- 695 +++Q + ATGRLSST+PNLQNIPVR GR IRQ FI Sbjct: 640 TFNQTIAATGRLSSTEPNLQNIPVRTAAGREIRQGFIVGAGSGASGDGGVGAGSGASGPD 699 Query: 696 ---------------PEDY-VIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAA 739 + + +++ADYSQIE+RIMAHLS D GL+ AF G+D+H + Sbjct: 700 GVGAGSGSSGHDGGTGDGFDCLMTADYSQIEMRIMAHLSEDAGLIEAFNTGEDLHNFVGS 759 Query: 740 EVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVL 799 FG+P++ VT+E R KA+++GL YG+SAFGLA QL I R EA++ MD YF R+ GV Sbjct: 760 RAFGVPIDEVTTEMRHRVKAMSYGLAYGLSAFGLAAQLKISRDEAKEQMDAYFARFGGVR 819 Query: 800 EYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRA 859 +Y+ A+A+ Y TL GRR YLPD+ S N RR +AER A+NAP+QGTAADIIK A Sbjct: 820 DYLHDVVAEARRNEYTATLFGRRRYLPDLNSDNWQRRQSAERMALNAPIQGTAADIIKVA 879 Query: 860 MIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVG 919 MI V LQ+E+ R RM++QVHDELV EV + DAV + + M L VPL V VG Sbjct: 880 MINVHKRLQSEELRSRMLLQVHDELVVEVATGERDAVEAVVREEMGAAITLSVPLEVSVG 939 Query: 920 SGENWDQA 927 G +WD A Sbjct: 940 FGRSWDDA 947 >UniRef50_A8R8A1 DNA polymerase I n=2 Tax=unclassified Erysipelotrichaceae RepID=A8R8A1_9FIRM Length = 861 Score = 881 bits (2278), Expect = 0.0, Method: Composition-based stats. Identities = 302/927 (32%), Positives = 485/927 (52%), Gaps = 76/927 (8%) Query: 8 PLILVDGSSYLYRAYHAF---PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 L+L+DG+S L+RAY+A +T S G PT A+YG + M+ + P + V +DA Sbjct: 3 KLLLIDGNSMLFRAYYATLYGRMMTTSNGIPTNAVYGFITMVNKALDMIDPDYVFVAWDA 62 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 TFR ++ YK R + +L Q + + A G+ G+EADD+IG++A++ Sbjct: 63 GKPTFRHTTYKEYKGTRKELDKELIVQFPIVREYLDAAGIKRYECEGIEADDIIGSIAKQ 122 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFL 180 + I + D+D+ QL+ P + ++ +++ Y + P+ IID Sbjct: 123 HPELAIH--ILSSDRDLLQLIDPTTDVYLMKKGISEIEVMDEAQLMETYTLCPQQIIDLK 180 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 ALMGDS+DNIPGV G+GEKTA LL+ +D +Y +I G + KLE K Sbjct: 181 ALMGDSADNIPGVKGIGEKTAIKLLKEYQSVDNVYEHIAEIKG-------KLKEKLENGK 233 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 E A+LS LATIKTD ++ + + + +P+ L F KYE + + ++ + Sbjct: 234 ESAFLSKFLATIKTDAKIPVDMKTCKRVEPST-TLHDFFVKYEMNSFAKASAKKEEVKRE 292 Query: 301 GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDS 360 G + ++K D+ Sbjct: 293 GKRNVV----------------------------------PCVSKELLVDGSVLYANLDA 318 Query: 361 LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN 420 + A L G + A D + LE + K+ + Sbjct: 319 ENYYDATLYGFAIAHGNNCEYIS--------LEDAKNDTALLEYI-----HTDNGKIVYD 365 Query: 421 LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG 480 K I + D MLE+++L+ + + D LAE++ T++ E++ GK Sbjct: 366 AKNVYHAWHRNHIAFVPVHRDVMLEAFLLDGMISDY--DKLAEKYAFDCTLSKEDVFGKK 423 Query: 481 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI 540 + E+A YA + A+ + +++ +L++ K +++ IEMP+V VL + Sbjct: 424 GK---PKLVVEEDAAAYAMQCAENLANIEQQLFDELEQ-KDMKELYDTIEMPVVEVLYAM 479 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK 600 E+ GV + L +E ++ L + +E AG EFN++S KQL +L+++ G+ K Sbjct: 480 EKEGVHTSVETLQEIAEATGKKIEALNAQIYEYAGMEFNINSPKQLAVVLYDELGLPCGK 539 Query: 601 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 K ST +VLE+L +P+ ++LE R K+ STY L I K G++HT ++ Sbjct: 540 KR-----STGADVLEKLKPVHPIISLLLEQRKYQKIYSTYAVGLSKHIL-KDGKIHTIFN 593 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRD 720 Q T TGRLSS++PNLQNI VR+EEG+ IR+AF+A + ++SADYSQIELR++AH++ + Sbjct: 594 QIQTQTGRLSSSEPNLQNISVRDEEGKVIRKAFVASPQHTLMSADYSQIELRMLAHMANE 653 Query: 721 KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 K ++ AF +G DIH TA ++F + + V S RRSAK +NFG++YG S FGL+ QL I Sbjct: 654 KTMIQAFNQGIDIHNQTAMQIFDVDHDHVDSNMRRSAKTVNFGIVYGQSDFGLSEQLGIT 713 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 KEA++++D YF YP + +M+ T A +E GYV+T+ GRR Y+ +I N R + Sbjct: 714 MKEAKRFIDKYFASYPNIKTFMDDTIAFCEENGYVKTMFGRRRYIKEINDKNYMMREFGK 773 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 RAA+NAP+QG+AAD+IK AM+ + ++ ++ + RMI+Q+HDEL+F+V D++D + + Sbjct: 774 RAAMNAPIQGSAADLIKLAMVHIYQTMKEKKVKSRMILQIHDELIFDVCDDELDTMKDIV 833 Query: 901 HQLMENCTRLDVPLLVEVGSGENWDQA 927 Q M+ +L VPL+ E G+ W A Sbjct: 834 EQGMQQAMQLRVPLIAEASFGKTWYDA 860 >UniRef50_B0PCZ2 DNA polymerase I n=3 Tax=Clostridiales RepID=B0PCZ2_9FIRM Length = 874 Score = 881 bits (2276), Expect = 0.0, Method: Composition-based stats. Identities = 327/933 (35%), Positives = 474/933 (50%), Gaps = 66/933 (7%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 M P L+ VDG+S L RAY+ LT GE T +YG L++L ++ + +P AV Sbjct: 1 MRGWPAVKLLAVDGNSILNRAYYGIKALTTKNGEFTNGIYGFLSILLRVLDEAEPDAVAV 60 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 FD + TFR +L++ YK+ R MP +L +Q+EPL ++ A+G ++ G EADD++GT Sbjct: 61 AFDLRAPTFRHKLYDGYKAQRKGMPHELASQLEPLKELLGALGFQIVTCEGYEADDILGT 120 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN------TILGPEEVVNKYGVPPE 174 LAR + + G +I+TGD+D QLV P++++ T T+ V KYGV P Sbjct: 121 LARSSAETGWDCVIATGDRDSLQLVGPHVSVRLATTKMGQPASTLYDETAVREKYGVEPA 180 Query: 175 LIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAA 234 ++D ALMGD+SDNIPGV G+GEKTA +L+ +D +YA+ + + + Sbjct: 181 QLVDVKALMGDASDNIPGVAGIGEKTALSLIGQYHDIDAIYAQLDTLE-----IKPGVRK 235 Query: 235 KLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAG 294 KL + KE+AY S +L I D ++ + + L + E + Sbjct: 236 KLGEGKEMAYTSRKLGEICCDAPIDASPAAYRRAPVDQAKAAALLARLEMFKMMERWGVD 295 Query: 295 KWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAF 354 + A A P ET+ P I A AF Sbjct: 296 PAAARETAGGGAAP-ETAREPSRPMRAEADAPDLAQRVIK------------AGAADLAF 342 Query: 355 DTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKA 414 + + +A PD E L+PLL Sbjct: 343 GLDGNG-----------------------DIAAVAAALPDGTLLLSGGETLEPLLA-AGV 378 Query: 415 LKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFE 474 + K + G+ L + FD L +Y+L+ + +D L ++ Sbjct: 379 KLRVWSSKPLHRMAYRRGVHLENVTFDGELAAYLLSPTSAGYDPVQLCAQYATETRALEG 438 Query: 475 EIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLV 534 EI + K+ ++++H+ + IEMPL Sbjct: 439 EIPEQYAALAAQAAALSALL---------------DKLTDEIREHE-QEKLLYEIEMPLA 482 Query: 535 PVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQ 594 VL+ +E G +D + L ++ EL R+ E E AG +FNL+S KQL +LF K Sbjct: 483 RVLAGMECEGFALDTQALRDYGGELDDRIDETHAAIVEYAGYDFNLNSPKQLGDVLFVKL 542 Query: 595 GIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGR 654 G+ KKT G ST+ +VLE L +P+ ILEYR L+KLKSTY D L ++ P GR Sbjct: 543 GLPAKKKTKTG-YSTNVDVLEALRPQHPIIGEILEYRKLSKLKSTYVDGLLKVVGP-DGR 600 Query: 655 VHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIM 714 V +++ Q T TGR+SST+PNLQNIP+R EEG R+R+ F A + +V ADYSQIELR++ Sbjct: 601 VRSTFQQTETRTGRISSTEPNLQNIPIRTEEGSRMRRFFTARPGWKLVDADYSQIELRVL 660 Query: 715 AHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLA 774 A L+ D+ ++ AF G+DIH TAA+VFG+P TVT R AKA+NFG++YG+ AF L+ Sbjct: 661 ADLADDQNMIAAFQSGEDIHATTAAQVFGMPGGTVTPLMRSRAKAVNFGIVYGIGAFSLS 720 Query: 775 RQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGA 834 + + + EA Y+ Y Y GV +YME T A A+E GYV+TL GRR YLP++ +SN Sbjct: 721 QDIGVTVSEADSYIKSYLAHYAGVRKYMEDTIAFARENGYVKTLFGRRRYLPELAASNKV 780 Query: 835 RRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVD 894 +A ER A N P+QGTAADIIK AM+ V L+ E R R+I+QVHDEL+ E D++D Sbjct: 781 TQAFGERVARNTPIQGTAADIIKIAMVRVFERLRREGLRARLILQVHDELLVEAPDDEID 840 Query: 895 AVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 + + ME+ L VPL + G+NW A Sbjct: 841 RARAILKEEMEHAIALKVPLEADTNVGDNWLAA 873 >UniRef50_B5YDJ0 DNA polymerase I n=3 Tax=Dictyoglomus RepID=B5YDJ0_DICT6 Length = 856 Score = 879 bits (2271), Expect = 0.0, Method: Composition-based stats. Identities = 319/926 (34%), Positives = 501/926 (54%), Gaps = 93/926 (10%) Query: 5 PQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 + ++++DGSS +YR Y+A PPL GE T A+YG + +L + + P V FD Sbjct: 18 SKRKILIIDGSSLIYRVYYALPPLKTKNGELTNALYGFIRILLKAVEDFNPDLVGVAFDR 77 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 TFR +++ YK+ RPPM DDL+AQI + ++ +PLL G EADD+I T+ + Sbjct: 78 PEPTFRHVIYKEYKAKRPPMKDDLKAQIPWIREFLRLNDIPLLEEPGYEADDIIATIVNK 137 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPELIIDFL 180 + + I +GD D+ QLV+ LI+ I P+ V +++GV P I + Sbjct: 138 YKDDLK--YILSGDLDLLQLVSDKTFLIHPQKGITEFTIYDPKAVKDRFGVEPYKIPLYK 195 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 L+GD SDNIPGV G+G K A +L+ + + ++ + +E+N Sbjct: 196 VLVGDESDNIPGVNGIGPKKASKILEKISSV-------DEFKSKIKVLDSDLRELIEKNW 248 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 + + +L T+K ++ + E+++ K+YE K + + Sbjct: 249 NIIERNLELVTLK---NIDKDLILKPFEIKRDEKVIDFLKRYELKSILQKLFPDLQEEEN 305 Query: 301 GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDS 360 + I D E + ++EK FAF D Sbjct: 306 ------------------------------IEIKDVEEIN--FNEVEKEGYFAFKCLGDR 333 Query: 361 LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN 420 G+S + + G +I + ++ ++ E K+G Sbjct: 334 AF------EGISLSFKEGEGYFI---------SPFDFNNEIRKKIENIISSENVKKIGSY 378 Query: 421 LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG 480 ++ D L +++G FD L SY+LN H +D L +L + ++ AG Sbjct: 379 IQRDLHFL---NCKIKGDVFDVSLASYLLNPERQNHSLDILIGEYLNKTSFIPQKYAG-- 433 Query: 481 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI 540 L + + K++G V NIE+PL+PVL + Sbjct: 434 -----------------------YLFPLKSILEERI-KNEGLEFVLYNIEIPLIPVLYSM 469 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK 600 E+ G+K+D + L S+E R+ +LE++ +E+AG FNL+S KQL +LFE+ + K Sbjct: 470 EKWGIKVDKEYLKQLSDEFCERIKKLEEEIYELAGTRFNLNSPKQLSEVLFERLKLPSGK 529 Query: 601 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 K G STS VL+ L +P+ + IL+YR L KLKSTY D +P ++NP+TGRVHT ++ Sbjct: 530 KGKTG-YSTSSSVLQNLINAHPIVRKILQYRELYKLKSTYVDAIPNLVNPQTGRVHTKFN 588 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRD 720 TATGR+SS++PNLQNIP+++EEGR+IR+AF++ + Y +VS DYSQIELRIMAHLS++ Sbjct: 589 PTGTATGRISSSEPNLQNIPIKSEEGRKIRRAFVSEDGYFLVSLDYSQIELRIMAHLSQE 648 Query: 721 KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 L++AF +G+DIHR TA+E+FG+P E V R AKA+NFG+IYG+S+FGL+ ++I Sbjct: 649 PKLISAFQKGEDIHRRTASEIFGVPEEEVDDLLRSRAKAVNFGIIYGISSFGLSETVSIT 708 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 +EA+K++D YF+ YP V ++++T +A+E+ YV+TL GR+ Y+P+IKS N R A E Sbjct: 709 PEEAEKFIDSYFKHYPRVKLFIDKTIHEAREKLYVKTLFGRKRYIPEIKSINKQVRNAYE 768 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 R AINAP+QGTAADIIK AMI + ++ + + R+++Q+HDEL+ EV +++++ Sbjct: 769 RIAINAPIQGTAADIIKLAMIEIYKEIENKNLKSRILLQIHDELILEVPEEEMEFTPLMA 828 Query: 901 HQLMENCTRLDVPLLVEVGSGENWDQ 926 + ME L VPL+VE+ G+N + Sbjct: 829 KEKMEKVVELSVPLVVEISVGKNLAE 854 >UniRef50_P46835 DNA polymerase I n=51 Tax=Actinobacteridae RepID=DPO1_MYCLE Length = 911 Score = 874 bits (2259), Expect = 0.0, Method: Composition-based stats. Identities = 320/937 (34%), Positives = 486/937 (51%), Gaps = 51/937 (5%) Query: 3 QIPQNPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 + L+L+DG+S +RA++A P G T A+YG ML +L+ + PTH A Sbjct: 12 DHTKPMLMLLDGNSLAFRAFYALPTENFKTRGGLTTNAVYGFTAMLINLLREEAPTHIAA 71 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 FD KTFR E + YK++R +P + QI+ ++ A+G+ + A +G EADD+I T Sbjct: 72 AFDVSRKTFRSECYAGYKANRSSIPAEFHGQIDITKEVLGALGITVFAEAGFEADDLIAT 131 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPELI 176 LA +AE G VL+ TGD+D QLV+ ++T++ PE V+ KYGV P Sbjct: 132 LATQAENEGYRVLVVTGDRDALQLVSNDVTVLYPRKGVSELTRFTPEAVIEKYGVTPAQY 191 Query: 177 IDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKL 236 D AL GD SDN+PG+PGVGEKTA + G L L E + G + L Sbjct: 192 PDLAALRGDPSDNLPGIPGVGEKTAAKWIVDYGSLQGLVDNVESVRG-------KVGEAL 244 Query: 237 EQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKW 296 + + +L + DV L T + L +Q + + LF EF+ + Sbjct: 245 RTHLASVVRNRELTELVKDVPLVQTSDTLRLQPWDRDRIHRLFDNLEFRVLRDRLF---- 300 Query: 297 LQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDT 356 ++A V +D +L+ T+ W+AK + Sbjct: 301 --------------EALAAAGERVPEVDEGFDVRGGLLESGTVGRWLAKHADDGRRSGLA 346 Query: 357 ETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALK 416 + + L+ A G YI A D D ++ L D K Sbjct: 347 IVGTHLPHGGDATALAVAAADGNGGYIDTAMLTPDDDDALA---------AWLADPDNPK 397 Query: 417 VGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEI 476 K LA G L GI DT L +Y++ +D L+ R+L+ + Sbjct: 398 ALHEAKLAMHDLAGRGWTLGGITSDTALAAYLVRPGQRSFTLDDLSLRYLRRELRAETPE 457 Query: 477 AGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPV 536 + +++ ++A + A + L + +L ++ +E+P+ V Sbjct: 458 QEQFSLLDNVDEVD-KQAIQTLILRARAVVDLAAALDAELDLIDS-TSLLGEMELPVQQV 515 Query: 537 LSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGI 596 L+ +E+ G+ D ++L + ++ + + A+ + G++ NLSS KQLQ +LFE+ G+ Sbjct: 516 LADMEKAGIAADLRLLTELQSQFGDQIRDAAEAAYAVIGKQINLSSPKQLQVVLFEELGM 575 Query: 597 KPLKKTPGGAPSTSEEVLEEL--ALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGR 654 K+T G +T + L+ L ++P + +L +R + +LK T D L + GR Sbjct: 576 PKTKRTKTG-YTTDADALQSLFCKTEHPFLQHLLTHRDVTRLKVT-VDGLLNAV-AADGR 632 Query: 655 VHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP---EDYV-IVSADYSQIE 710 +HT+++Q + TGRLSST+PNLQNIP+R GR+IR AF+ Y +++ADYSQIE Sbjct: 633 IHTTFNQTIATTGRLSSTEPNLQNIPIRTNAGRQIRDAFVVGSENNGYTELMTADYSQIE 692 Query: 711 LRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSA 770 +RIMAHLSRD+GL+ AF G+D+H A+ FG+P+E +T E RR KA+++GL YG+SA Sbjct: 693 MRIMAHLSRDEGLIEAFHTGEDLHSFVASRAFGIPIEDITPELRRRVKAMSYGLAYGLSA 752 Query: 771 FGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKS 830 +GLA QL I +EA+ M+ YF R+ GV +Y+ QA++ GY T+ GRR YLP++ S Sbjct: 753 YGLATQLKISTEEAKLQMEQYFARFGGVRDYLMDVVEQARKDGYTSTVLGRRRYLPELDS 812 Query: 831 SNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHK 890 SN R AAERAA+NAP+QG+AADIIK AMIAVD L+ + RM++QVHDEL+FEV Sbjct: 813 SNRQIREAAERAALNAPIQGSAADIIKVAMIAVDKSLKQAKLASRMLLQVHDELLFEVAI 872 Query: 891 DDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 + + + + + M + LDVPL V VG G +W A Sbjct: 873 GEREQIEAMVREQMGSAYPLDVPLEVSVGFGRSWGAA 909 >UniRef50_C2D755 DNA-directed DNA polymerase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D755_9ACTN Length = 1030 Score = 874 bits (2258), Expect = 0.0, Method: Composition-based stats. Identities = 315/996 (31%), Positives = 486/996 (48%), Gaps = 97/996 (9%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAFP-PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAA 59 + + ++DG+S ++RA+HA P++ G T A+ G NML L+ + P Sbjct: 62 LPSRYTKTIAVIDGNSLMHRAFHAIMQPMSAPDGRSTNALLGFFNMLIKLVRSFSPDGII 121 Query: 60 VVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIG 119 FD R ++ YK+ RPPM L Q + +++A+ +P++ + G E DD++G Sbjct: 122 CAFDKGKPQVRIDMLPQYKAQRPPMDPSLHEQFPMVKELLRALQIPVVELQGWEGDDILG 181 Query: 120 TLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKY-GVPPE 174 TLA + E G +L+ TGD+D+ QL T ++++++T I+ PE+V + Y G+ P Sbjct: 182 TLAHQGELQGYSMLLFTGDRDIYQLATEHVSVVSTKKGVSDVRIMTPEDVDDLYHGITPN 241 Query: 175 LIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAA 234 L+ DF L GD+SDNIPGVPG+G K A AL+ G L+ + A ++++G M Sbjct: 242 LVPDFYGLKGDTSDNIPGVPGIGPKRAAALIVEYGSLEGVIAHADQVSG-------KMGE 294 Query: 235 KLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAG 294 L + + A LS ++ATI+ D + + E+ F F + Sbjct: 295 NLRNHIDDARLSKRVATIRRDAPITVDLCAAAFPTFDPAEVARAFCALGFTNLVPKLLRF 354 Query: 295 KWL------------------QAKGAKPAAKPQETSVAD--------EAPEVTATVISYD 328 + PA+ T AD + + T D Sbjct: 355 LPSLNGADIKGIIHDAATAAKRNSAVLPASAQHTTMSADSLTSSVQAHSTQATPLDSLVD 414 Query: 329 NYVTILDEETLKAWIAKLEKAPVFAF---DTETDSLDNISANLV--GLSFAIEPGVAAYI 383 T+ E + AP ++ +V G+ A AY Sbjct: 415 RAQTVHASEEEQTQSEVNTYAPDYSALFPACVQTQAHAFIKRVVSCGIWVAC-----AYE 469 Query: 384 PVAHDYLDAPDQISRERALELLKPLLED----------------EKALKVGQ----NLKY 423 P + Q S + L+ + D + +K G N K Sbjct: 470 PASMKSAQENVQPSFDTLLDTHTLWVTDGTTLAQFSGTDVSSVLKTLVKSGHVIALNCKA 529 Query: 424 DRGILAN------YGIELRGI----AFDTMLESYILNSVAGRHDMDSLAERWLKHKTITF 473 +L +EL I FD L +Y+LNS A + +L +L Sbjct: 530 LLHVLYPPVSSEPASLELSDISTAALFDVGLAAYLLNSDANDYSWQTLCSAYLPTFVYPD 589 Query: 474 EEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPL 533 +E YA E A L+ + +L G ++F +E+PL Sbjct: 590 -------------TTDDTDEPNEYALE-AIAVRALYPVLR-ELLHTDGSDDLFYELELPL 634 Query: 534 VPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEK 593 +PVL +ERNG+ D +L S L+ L + + +A ++FN+ S QL +LF+ Sbjct: 635 IPVLLHMERNGIYCDKHLLAEQSRALSHELNAMSLELRRLAQQDFNIDSPMQLSHVLFDV 694 Query: 594 --QGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPK 651 K LKKT G ST+ + L L++ ++IL+YR K+K+TY D L I Sbjct: 695 WGLPTKGLKKTRRGYYSTNAQTLASLSMADERVQLILDYRERMKIKNTYLDALVHDIR-S 753 Query: 652 TGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIEL 711 GR+H++++Q + ATGRLSS+DPNLQNIP R+ G R+R+AF+ P +++ ++ DYSQIEL Sbjct: 754 DGRIHSTFNQTIAATGRLSSSDPNLQNIPTRSSLGHRVRKAFVLPRNHLFLACDYSQIEL 813 Query: 712 RIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAF 771 R++AHLS+D+ L+ AF G D H ATAA +F + + VT R AKA+NFG++YG AF Sbjct: 814 RLLAHLSQDEHLIHAFQTGADFHAATAARIFHVSPDEVTPALRSRAKAVNFGIVYGQQAF 873 Query: 772 GLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSS 831 GLA L I RKEAQ+ +D YFE YPGV ++++ + A+E YV T+ GR+ ++ I S Sbjct: 874 GLATSLKISRKEAQEMIDRYFEAYPGVRKFLDESVQFAREHSYVPTMYGRKRHIAQIDSR 933 Query: 832 NGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKD 891 N R+ AER A+N PMQG+AADIIK AMI V+ ++I+Q+HDEL FEV + Sbjct: 934 NFQLRSFAERTAMNHPMQGSAADIIKLAMIEVEKQFAQLGLASKLILQIHDELDFEVVPE 993 Query: 892 DVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 +++ V+ + + ME L VPL+ E+ +NW A Sbjct: 994 ELERVSSVVKRAMEGVVTLRVPLIAEISYADNWADA 1029 >UniRef50_Q118S8 DNA polymerase I n=4 Tax=Cyanobacteria RepID=Q118S8_TRIEI Length = 1045 Score = 872 bits (2253), Expect = 0.0, Method: Composition-based stats. Identities = 336/1051 (31%), Positives = 512/1051 (48%), Gaps = 148/1051 (14%) Query: 10 ILVDGSSYLYRAYHAFPP-----LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 + VDG S +R+Y+AF L S G PT +G L L +I KP + A+ FD Sbjct: 9 LFVDGHSLAFRSYYAFAKSRNGGLKTSTGIPTSICFGFLKSLLEVINTQKPEYLAIAFDL 68 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 TFR E ++YK+ RP P+DL + L ++KA L ++ G EADD++GTLA++ Sbjct: 69 GKPTFRHEADKNYKADRPEPPEDLIIDLGNLQDLLKAFNLTVITAPGYEADDILGTLAKK 128 Query: 125 AEKAGRPVLISTGDKDMAQLVT--PNITLINTMTNT-----ILGPEEVVNKYGVPPELII 177 A G V I +GD+D+ QL+ I++++ PEEV K G+ P ++ Sbjct: 129 ASATGFKVKILSGDQDLFQLIDAEKGISVLHLPGGKGSIPQEFFPEEVKEKLGILPTQVV 188 Query: 178 DFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLE 237 D+ AL GD SDNIPGV G+G+KTA LL G L +YA E+I G + KL Sbjct: 189 DYKALCGDKSDNIPGVRGIGQKTAVKLLNEYGCLSEIYASLEQIKGAN-------KKKLV 241 Query: 238 QNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWL 297 K A S +A I+ +V L + E + ++ E+ + +K E + + + + Sbjct: 242 LGKTEAEHSQFMAKIEVNVPLNIDIEDCKFKKIYPSEIEPILQKLELQHFINKIPHLEQQ 301 Query: 298 QAKGAKPAAKPQE-----------------------TSVADEAPEVTATVISYDNYVTIL 334 + + E ++ + + + S + Sbjct: 302 FNSLVEVKSGLDESGIQQQEISQNTLVEIGSDDWFFSAEDTKVAKQQTSTKSKIKPQIVD 361 Query: 335 DEETLKAWIAKLEKAP----VFAFDTETDSLDNISANLVGLSFAIEPG--VAAYIPVAHD 388 E L + L++ A+DTET SL+ A LVG+ AYIP H Sbjct: 362 TIEKLNKLVNILKEQKNPHIPVAWDTETTSLEPRDAELVGIGCCWGKNMEDVAYIPTGHK 421 Query: 389 YLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYI 448 D+++ LE LKP+LE + KV QN K+DR + GI+L G+ FDTML SY+ Sbjct: 422 TDKNLDKVT---VLESLKPVLESSEYPKVFQNSKFDRLVFRCQGIKLTGVFFDTMLASYV 478 Query: 449 LNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQL 508 LN A +H ++ + R+L++ I + T + + + Y VT QL Sbjct: 479 LNPEA-KHSLEEIYIRYLRNVGINLQSYQDVVSKNQTIADLDILKVADYCGTQVWVTFQL 537 Query: 509 HLKMWPDLQK-------HKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTL 561 K+ +L+K K + ++E PL PVL+ +E G++ID + L S +L Sbjct: 538 VEKLRTELEKADKNKSTEKSLYRLLVDVEQPLEPVLAEMEFQGIRIDIEYLKKFSVQLKE 597 Query: 562 RLAELEKKAH--------------EIAGEEFNLSSTKQ---------------------- 585 L E+EK+A EI +FN S +Q Sbjct: 598 DLEEIEKRAFKTVDSQVLQKYLQTEIHEIDFNSFSNQQELKKAISSPILKAYITKLLKEH 657 Query: 586 ---------------------------LQTILFEKQGIKPLKKTPGGA-PSTSEEVLEEL 617 L +LF K ST LE+L Sbjct: 658 RQNLENIESQINQVETRDLLNLNSPSQLSELLFRILNQNHKKSRRIKTGYSTDVVALEKL 717 Query: 618 A---LDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDP 674 +P+ IL +R L KL STY + +P ++ T RVHT+++Q T TGRLSS++P Sbjct: 718 QTEPEHHPIIDEILNHRTLYKLFSTYVEAIPRLVRSDTQRVHTNFNQTQTDTGRLSSSEP 777 Query: 675 NLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIH 734 NLQNIP+ + R+IRQAF+ +D+++V+ADYSQIELRI+AHLS++ L+ A+ +D+H Sbjct: 778 NLQNIPIGTKFSRQIRQAFLPKKDWLLVAADYSQIELRILAHLSQEPVLIEAYKNNQDVH 837 Query: 735 RATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFER 794 TA +F E ++SE+RR K INFG+IYGM A LAR + I KE++++++ Y ++ Sbjct: 838 TVTAKLLFEK--EEISSEERRVGKTINFGVIYGMGAQKLARSVKITVKESKQFLEKYKQQ 895 Query: 795 YPGVLEYMERTRAQAKEQGYVETLDGRRLY-------LPDIKSSNGARRAAAE------- 840 Y V Y+E+ + QA +GYVET+ GRR Y + D+K E Sbjct: 896 YSLVFAYLEKLKKQAIAKGYVETILGRRRYFELESKTIRDLKDKEPEEINLQELKFSQND 955 Query: 841 ----RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAV 896 R+A N+P+QG++ADIIK AMI ++ L + ++++QVHDELVFEV +++ + Sbjct: 956 AQILRSAANSPIQGSSADIIKIAMIRLNKILT--NYQTKLLLQVHDELVFEVPPSELEKM 1013 Query: 897 AKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 + I MEN L VPL+V++ G+NW + Sbjct: 1014 QQLIKSTMENAVTLKVPLIVDIHGGKNWMET 1044 >UniRef50_A8FKC7 DNA polymerase I n=20 Tax=Campylobacter RepID=A8FKC7_CAMJ8 Length = 879 Score = 871 bits (2251), Expect = 0.0, Method: Composition-based stats. Identities = 318/924 (34%), Positives = 488/924 (52%), Gaps = 52/924 (5%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 L ++D + +R Y+A NS G+ +G + G N + SL ++K + D+KG Sbjct: 2 KTLTIIDTFGFFFRLYYALKGFKNSQGQASGMISGFANFIYSLKNEHKSDYIVFALDSKG 61 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 KTFR E+ +YK +R P P +L QI M++ MG ++ G EADD+I + R E Sbjct: 62 KTFRSEIDPNYKQNRTPPPPELLEQIPICIEMIEKMGFISVSQEGYEADDIIASFVRTCE 121 Query: 127 KAGRPVLISTGDKDMAQLVTP-NITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185 V I T DKD+ QL+ ++ + ++ + KYGV P I DFLAL GD Sbjct: 122 DRDIFVRIITQDKDLYQLIKDGKTSIYSPISKNDYDEAACLEKYGVKPHQIRDFLALCGD 181 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 SSDNIPGV G+G K A+ LL G ++ +Y + + L + KE A+L Sbjct: 182 SSDNIPGVKGIGAKGAKTLLDEFGSIEGIYENL------TLVRNERSRNLLLEGKENAFL 235 Query: 246 SYQLATIKTDVELELTCEQLEVQQPAA-EELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304 S +LA++ ++E++ E+ ++L + + YE + + K Sbjct: 236 SKKLASLYENLEVQDLIEKATYPDEEPLLKILEILEHYELNTLLKKLRQNPDNKDKNLGF 295 Query: 305 AAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNI 364 A I DE L + L+K + AFDTET LD Sbjct: 296 KAT------------------------LIQDENKLFEILNTLDKESIIAFDTETTGLDTK 331 Query: 365 SANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYD 424 A +VG SF + A Y+P+ H+YL +QIS + A + ++ + +G NLKYD Sbjct: 332 EAKIVGFSFCMSENEAFYVPLTHNYLGVGEQISLQSAKKAIEVIFNHF---VIGHNLKYD 388 Query: 425 RGILANY-GIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQ 483 I+ N G+ L DTM+ +++ N R +MD LA R ++T+ FE + KG+N Sbjct: 389 FKIIQNNFGLNLPQKYADTMILAWLKNPSL-RVNMDDLALRLFNYETLHFESLVKKGEN- 446 Query: 484 LTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERN 543 F + LE+A +YAAEDA +TL+ +L +L+ L + +N E + ++ +E N Sbjct: 447 --FASVELEKACKYAAEDAYITLRFYLYFLKNLET--PLLELAKNCEFDFIKIIMMMEEN 502 Query: 544 GVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTP 603 G+K+D L ++ + L ++ + + + FNL+S KQ+ ILFEK + KK Sbjct: 503 GIKLDTNALEILMKKFENEIKNLSEEIYTLCEDRFNLNSPKQVGDILFEKLKLPSGKKGK 562 Query: 604 GGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLM-INPKTGRVHTSYHQA 662 G ST E+VL L +P+ IL+YR LAKL STY + L + + K R+++S+ Q Sbjct: 563 TG-YSTDEKVLNALLDKHPVIAKILDYRELAKLYSTYCEPLLKLALKDKNSRIYSSFLQT 621 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKG 722 TATGRLSS DPNLQNIP + + + F+A + + +S DYSQIELR++AH S D+ Sbjct: 622 GTATGRLSSKDPNLQNIPAHGQYAKDYKSCFVAKDGFSFISLDYSQIELRMLAHFSEDEK 681 Query: 723 LLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRK 782 LL AFA +DIH TA +FG E R AK+INFGLIYGM L++ L I Sbjct: 682 LLNAFANDEDIHARTAIMIFG----ESNYETRSVAKSINFGLIYGMGYKTLSQNLKIEAH 737 Query: 783 EAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERA 842 A+ Y++ YFE + + +Y E + +AK+ G++ TL GR+ Y D +++ + A ER Sbjct: 738 LAKSYIEKYFENFTSIKKYFETVKNKAKQNGFITTLSGRKRYF-DFENAKPMQIAMYERE 796 Query: 843 AINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQ 902 +IN+ +QG+AAD+IK AM+ ++ L ++ ++I+Q+HDEL+FEV D + K+ Sbjct: 797 SINSILQGSAADVIKLAMLEINKELNEDK---KLILQIHDELIFEVKDDLCENFVKKTRD 853 Query: 903 LMENCTRLDVPLLVEVGSGENWDQ 926 +MEN +L V L +NW Sbjct: 854 IMENIVKLKVKLKTSSSIAKNWGD 877 >UniRef50_C8W7U1 DNA polymerase I n=3 Tax=Coriobacteriaceae RepID=C8W7U1_ATOPD Length = 912 Score = 870 bits (2249), Expect = 0.0, Method: Composition-based stats. Identities = 332/931 (35%), Positives = 487/931 (52%), Gaps = 53/931 (5%) Query: 5 PQNPLILVDGSSYLYRAYHAFP-PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 P+ + ++DG+S ++RA+HA P+ G PTGA++G NM L+ + P FD Sbjct: 26 PRRTIAVIDGNSLMHRAFHAIRQPMAAPDGTPTGALFGFFNMFIKLVESFSPDGVICAFD 85 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 R ++ YK+ RPPM L AQ + ++K + +P+ + G E DD++GTLAR Sbjct: 86 KGKPQIRIDMLPQYKAQRPPMDPALHAQFPVVKELLKTLDVPVCQLEGWEGDDILGTLAR 145 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKY-GVPPELIID 178 E G +L+ TGD+DM QL T N+ +++T I+ PE V + Y G+ PEL+ D Sbjct: 146 RGEAEGYQMLLFTGDRDMYQLSTENVKIVSTRKGVSDVSIMTPETVADLYAGITPELVPD 205 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 F L GDSSDNIPGVPG+G K A AL+ G LD + A +++ G + L Sbjct: 206 FYGLKGDSSDNIPGVPGIGPKKAAALIVEYGSLDEVIAHADEVKG-------KVGENLRA 258 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 + + A LS ++ATI+TD L++ + + +++ F F T+ + Sbjct: 259 HIDDALLSRKVATIRTDAPLDINLDDAKFPTFDPNDVVKAFSALGFTGMTSRLARMAGGS 318 Query: 299 AKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTET 358 A G ++ + + A S + ++E + + T Sbjct: 319 ASGVTAQTASATPALPIPSEFLQAGDASAALTAALENQEWIGVAEDSAADTGALFSLSHT 378 Query: 359 DSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVG 418 +S L F E AA + + + A D + + L + P+ E Sbjct: 379 ---LWVSTEKALLKFEGENATAALLRILREARVAADDV--KALLHEVSPVDSSEPQ---- 429 Query: 419 QNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAG 478 K D + FDT + +Y+L S D++ L E + + Sbjct: 430 ---KLDIETID------SDRLFDTGVAAYLLESDRSSFDINGLVELYFGSELPE------ 474 Query: 479 KGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLS 538 ++I L + L + G L +F ++EM L+PVL+ Sbjct: 475 ------PTDEIPAAALRA------VAARALVPVLTKKL-EDDGSLELFTSLEMQLLPVLA 521 Query: 539 RIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFE--KQGI 596 +ER G+ +DP+ L S +L +A+ H+ AGE+FNL S QL ILF+ K Sbjct: 522 AMERRGLYVDPQKLAEQSAQLGEDIAQRVASIHQTAGEDFNLDSPSQLSHILFDVLKLPT 581 Query: 597 KPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVH 656 LKKT G ST+ +VL ELA +Y + +LEYR AK+KSTY D LP +I R+H Sbjct: 582 YGLKKTRTGFYSTNAKVLGELAQEYQIVADVLEYRERAKIKSTYLDALPSLIRG-DKRIH 640 Query: 657 TSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAH 716 T+ +Q VTATGRLSS+DPNLQNIP R+E G R+R AF PE V ++ DYSQIELR++AH Sbjct: 641 TTLNQTVTATGRLSSSDPNLQNIPTRSELGHRVRTAFTVPEGSVFLACDYSQIELRLLAH 700 Query: 717 LSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQ 776 LS D+ L+ AF G D H ATAA VFG+P+E VT R AKA+NFG++YG AFGLA Sbjct: 701 LSADEHLVAAFNSGADFHAATAARVFGVPVEEVTPALRSRAKAVNFGIVYGQQAFGLATS 760 Query: 777 LNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARR 836 L I RKEAQ+ +D YF+ YPGV Y++ + A E GY T+ GR+ ++ + SN Sbjct: 761 LKISRKEAQEMIDRYFDAYPGVRAYLDDSVRTAHECGYAITMYGRKRHIREFNQSNRQLI 820 Query: 837 AAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAV 896 A ER A+N PMQG+AADIIK AMI V+ L+ E ++I+Q+HDEL EV + +++ V Sbjct: 821 AFGERTAMNHPMQGSAADIIKIAMINVEKRLRDEGLTSKLILQIHDELDLEVPESEIETV 880 Query: 897 AKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 + + + ME+ L VPL+ +V G NW +A Sbjct: 881 STLVKETMEDVVTLRVPLIADVSYGSNWAEA 911 >UniRef50_Q9RAA9 DNA polymerase I n=2 Tax=spotted fever group RepID=DPO1_RICFE Length = 922 Score = 869 bits (2245), Expect = 0.0, Method: Composition-based stats. Identities = 334/953 (35%), Positives = 515/953 (54%), Gaps = 56/953 (5%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 M Q +N L+L+DG +++RAY+A PLT+ GEP GA+YG +ML L+ +KP H AV Sbjct: 1 MTQ--KNTLLLIDGYGFVFRAYYAQQPLTSPKGEPVGALYGFASMLLKLLSDFKPKHVAV 58 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 VFD+ GK FR ++ YK++RPP P+DL Q+ + + + P+L +G EADD+I T Sbjct: 59 VFDSGGKNFRHHIYPEYKANRPPPPEDLVVQLPLVRDVASNLNFPILEKNGYEADDIIAT 118 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL 180 A + G V++ + DKD+ QL+ NI + + + + ++VV K+G + + + + Sbjct: 119 FAAKTAALGEDVVVISSDKDLLQLMGENIKIYDPLKGKYITEDDVVKKFGTTSDKLREVM 178 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 AL+GD SDNIPGVP +G KTA +L+ G ++ ++ E+++ L L+ +K Sbjct: 179 ALIGDRSDNIPGVPSIGPKTASSLITQFGSVENIFNSLEQVSSL------KQRETLQNSK 232 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 E A +S+QL + ++V+L+ LE P +++L G ++Y FK E ++ Sbjct: 233 EAALISWQLIGLDSNVDLDFQLNNLEWSPPNSDKLTGFLQEYGFKSLYKRAENLFDIKIN 292 Query: 301 GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDS 360 K + + T + I + L + K EK +F Sbjct: 293 DHKEIVENKVTEAKE-----------------ISNASELADFAKKAEKIGIFGIYLLQHK 335 Query: 361 LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN 420 DN+ + LS + + +HD + + + +++ LL D+ K+ + Sbjct: 336 GDNV---ALILSLQNQSYIIKISNTSHDLFSYNTKNNNDWFSDIIFNLLTDKSIRKITYS 392 Query: 421 LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLA----ERWLKHKTITFE-- 474 LK A E+ I D L Y L++ + ++ A R L E Sbjct: 393 LKPLLKFYAEQSHEITAIE-DLELMQYALSAGLSQKNLFEEALKEDNRHLSKPAYREEFK 451 Query: 475 ---------------EIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDL--Q 517 E A G + + E A + + ++ Sbjct: 452 GDTEALATAAYKSVREDASTGSTSKLPLETKFGKMSNVINESARIVAEFTSLYKQNILEL 511 Query: 518 KHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEE 577 K ++ NI++P+ +L ++E+ G+K+D L+ S E + +LE++ ++G + Sbjct: 512 KDNKAFRLYSNIDLPICFILDKMEKIGIKVDANYLNQLSAEFGAEILKLEEEIFALSGTK 571 Query: 578 FNLSSTKQLQTILFEKQGIKPLKKT-PGGAPSTSEEVLEELALD-YPLPKVILEYRGLAK 635 FN+ S KQL ILFEK + K + + ST E+LE+L+ Y + ++L +R L K Sbjct: 572 FNIGSPKQLGEILFEKMQLPFGKASAKASSYSTGAEILEKLSEHGYNIADLLLRWRQLTK 631 Query: 636 LKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA 695 LK+TYTD LP I+ T RVHT++ Q T TGRLSS +PNLQN+P+R+ EG +IRQAFIA Sbjct: 632 LKNTYTDSLPKQIDNITHRVHTTFLQTSTTTGRLSSQEPNLQNVPIRSSEGNKIRQAFIA 691 Query: 696 PEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRR 755 E Y ++SADYSQIELRI++H++ L AF DIH TA ++F L +TSE RR Sbjct: 692 EEGYKLISADYSQIELRILSHIANIDALKQAFINKDDIHTQTACQIFNLQKHELTSEHRR 751 Query: 756 SAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYV 815 AKAINFG+IYG+SAFGLA+QLN+ EA +Y+ YF Y GV EYME+T+A A GYV Sbjct: 752 KAKAINFGIIYGISAFGLAKQLNVSNGEASEYIKKYFAEYKGVQEYMEQTKAFASSNGYV 811 Query: 816 ETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVR 875 GR+ ++P I + AERAAINAP+QGT ADIIK AMI +D ++ + R Sbjct: 812 INFFGRKCFVPLIHDK--KLKQFAERAAINAPIQGTNADIIKIAMINLDQEIEKNNLKTR 869 Query: 876 MIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 +++Q+HDEL+FEV +D+V+ V I ++MEN T +DVP++ E+ G NW + H Sbjct: 870 LVLQIHDELLFEVPEDEVELVTPIIKKIMENSTNMDVPIITEIRVGNNWMEIH 922 >UniRef50_B5YG86 DNA polymerase I n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YG86_THEYD Length = 838 Score = 868 bits (2243), Expect = 0.0, Method: Composition-based stats. Identities = 314/916 (34%), Positives = 493/916 (53%), Gaps = 85/916 (9%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 + LVDGS ++YRAYHA L+ S G PT A+YG ML L+ + + FD+ T Sbjct: 4 IYLVDGSCFIYRAYHAIKGLSTSRGIPTNAIYGFTRMLLKLLREKNVKYILCAFDSPHPT 63 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK- 127 R +++E YK RP P DL QI+ + ++ A+G+ + V G EADD+I T + Sbjct: 64 KRHKIYEEYKITRPETPKDLPVQIDYIKQIIDALGITRIEVPGYEADDIIATAVGVINQF 123 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSS 187 A +I + DKDM QLV+ N+ + + + I+ E V+ KYGVPPE + DF+AL+GD+ Sbjct: 124 APLNFIIISIDKDMLQLVSDNVKIYDPINELIIDREYVIKKYGVPPEKLNDFMALVGDAI 183 Query: 188 DNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSY 247 DNIPGV G+GEKTA L++ G ++ + + I L ++ +++N + LS Sbjct: 184 DNIPGVKGIGEKTAANLIKRYGSIENILKNLDIIKPL------KVSDIIKKNIKSLQLSK 237 Query: 248 QLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAK 307 +L ++ D +E+ + L+++Q E+L+ +F++ EF + + + Sbjct: 238 ELVILRKDTPIEIKLDDLKIKQQDREKLVQIFRELEFNTLLKQIIKDFPNHSSCSVLQLN 297 Query: 308 PQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISAN 367 + + I K+++ F+ DS+ Sbjct: 298 LASENRRNTI-----------------------ELIEKIKEYGKFSVTFNKDSI------ 328 Query: 368 LVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGI 427 A G I ++ +L E LK+ N K Sbjct: 329 -----IAGVNGTLYEIAFNDTRVN---------------EILSSE-ILKIIYNAKEALKK 367 Query: 428 LANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFN 487 L N G++L FD M+ +Y++N G++++D L + E I Sbjct: 368 LKNSGLKLSPPYFDLMIVAYLINPNRGKYNIDELILEYTGKFYENAENI----------- 416 Query: 488 QIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKI 547 +L+ K+ +L K K N++ +IEMPL+ VL +E G+K+ Sbjct: 417 --------------NFYMFELYEKLNKEL-KEKELENLYFDIEMPLIEVLFDMEETGIKV 461 Query: 548 DPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAP 607 + + L ++ +++ L ++++K + IAG EFN++S KQL +L+++ G+K +K A Sbjct: 462 NIEKLETLTKHISMELDKIKEKIYTIAGTEFNINSPKQLAEVLYDRLGLK-TRKRGKKAR 520 Query: 608 STSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATG 667 ST EVLEELA+ + LP ++ YR L KL + Y L INP+T R+HT + Q V TG Sbjct: 521 STEMEVLEELAIQHELPHEVINYRTLNKLLTGYLIPLRDYINPETKRIHTKWSQTVAGTG 580 Query: 668 RLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAF 727 R+ S++PNLQNIPV+ E +R+ FI Y+ +SADYSQIELR++AH+S D L+ AF Sbjct: 581 RIVSSEPNLQNIPVKGEWAEFLREVFIPENGYMFLSADYSQIELRLLAHMSEDPALIKAF 640 Query: 728 AEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKY 787 +GKDIH ATA+E+F +P VT E RR AK +NFG+ YG+S FGL+ + IP ++A++ Sbjct: 641 LDGKDIHTATASEIFSIPENAVTDEHRRIAKTVNFGISYGISPFGLSESIKIPYEKAEEL 700 Query: 788 MDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAP 847 ++LYF RYP V +++E T + A++ GYV TL GR LP+I S N R +ER A+NA Sbjct: 701 IELYFLRYPMVRKFIEETISFAQKNGYVRTLFGRIRPLPEINSPNQFLRMQSERMAVNAR 760 Query: 848 MQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENC 907 +QGTAADIIK AMI + L+ E+ ++I+Q+HDE+V EV + ++ V++ + M++ Sbjct: 761 VQGTAADIIKIAMIRIYNRLKKEKLNAKIILQIHDEIVLEVEQKVIEKVSEIVQNEMKD- 819 Query: 908 TRLDVPLLVEVGSGEN 923 L VPL V V SG + Sbjct: 820 FSLSVPLEVNVFSGNS 835 >UniRef50_A9NF42 DNA polymerase I n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NF42_ACHLI Length = 880 Score = 868 bits (2243), Expect = 0.0, Method: Composition-based stats. Identities = 332/929 (35%), Positives = 492/929 (52%), Gaps = 61/929 (6%) Query: 7 NPLILVDGSSYLYRAYHAFPP-----LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 + LVDG+S L+RAY+A L S G T A++ M+ +I +H + Sbjct: 2 KKITLVDGNSILFRAYNATAYPGAKVLQTSTGIYTNAVFAFSGMIDKIIEISN-SHMLIA 60 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 FD T R + ++ YK+ R MP++L +QI +H ++K +G+ +++G EADD+IGTL Sbjct: 61 FDTGEPTHRHKSYDDYKAGRKEMPEELGSQIPLIHELIKYLGIKEYSMAGYEADDIIGTL 120 Query: 122 AREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELII 177 A+ AEKAG V + + D D+ QLVT +IT+ PE + YG EL I Sbjct: 121 AKMAEKAGYKVDVFSSDYDLLQLVTEHITVHMLKKGMRVVETYTPETLKETYGFSHELFI 180 Query: 178 DFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLE 237 DF AL+GD SDNIPGVPGVGE TA+ L+ G L+ + E I G + + Sbjct: 181 DFKALVGDKSDNIPGVPGVGEVTAKKLIAEYGTLENILNNAEHIKG-------KLGENIR 233 Query: 238 QNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWL 297 NKE A S +L+TI TD+ L E +V + E L+ +K+ E K+ Sbjct: 234 TNKEQAVFSKELSTILTDMPLPFDLEDTKVGEVDEESLINFYKRLELKQLVISYNK---- 289 Query: 298 QAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTE 357 K + AA ETS Y I E LK+ + + A E Sbjct: 290 --KNPEVAATTAETSEFQ--------------YKAIDSENALKSLLNQ-----DLAIYFE 328 Query: 358 TDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKV 417 + A L G+ + G Y + +L++ K LE K K Sbjct: 329 FSDFNYHKAELWGVGLS--NGKINYFVDSETFLNS----------ASFKAYLESSKYKKY 376 Query: 418 GQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIA 477 + K + L G E + +D +L +Y++ S G+ D +A+++ EE+ Sbjct: 377 TYHYKGTKVFLKKLGTEFNHVTYDLLLAAYLIQSSIGKQDFTFIAQQFQITDIQYDEEVY 436 Query: 478 GKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVL 537 GKG + I + G A + A + +L + L + L++ ++E+PL VL Sbjct: 437 GKGAKKA-LPLIPSDYEGHIA-KKAYIIHKLMQQTLDVL-TERNQLSLLNDVELPLSDVL 493 Query: 538 SRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIK 597 + +E G+ +D K L N +++++LR+ +L + +AG +FN+ S KQL +LF+ G+ Sbjct: 494 ADMEYQGLTVDLKELENQTKDMSLRIDKLRTEILLLAGVDFNVDSPKQLGDVLFDTLGLP 553 Query: 598 PLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHT 657 KKT G ST EVL L +P+ +I+EYR L KL STY + + + RVHT Sbjct: 554 NGKKTKTG-YSTGIEVLNNLIDHHPIINLIIEYRQLTKLYSTYLIGIKESVF-EDNRVHT 611 Query: 658 SYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHL 717 Y+QA+T TGRLSS +PNLQNIP+R EEGR+IR+ FI D V ADYSQIELR++A + Sbjct: 612 IYNQALTLTGRLSSLEPNLQNIPIRTEEGRQIRKLFIPEPDSYFVGADYSQIELRVLAAM 671 Query: 718 SRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQL 777 + K L AF E +DIH TA +VF + +TV SEQRR AKA+NFG+IYG+ + L+ + Sbjct: 672 ADVKNLKQAFEEDQDIHTVTAQKVFHV--DTVDSEQRRRAKAVNFGIIYGIGPWSLSEDI 729 Query: 778 NIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRA 837 + KEA+ ++ Y E YP + +YM AK GYVETL RR Y+P++ S R Sbjct: 730 GVTVKEAENFISRYLEVYPEIKDYMTNIVEFAKTHGYVETLLNRRRYIPELSSKVFNLRE 789 Query: 838 AAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVA 897 +R ++NAP+QGTAADIIK AMI + +L+ + + ++I+QVHDEL+ EV K+++D + Sbjct: 790 FGKRTSLNAPIQGTAADIIKLAMIDLHNYLKDNKKKSKLILQVHDELIVEVVKEELDEMK 849 Query: 898 KQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 + I +ME L V L G NW + Sbjct: 850 EVIPNIMEKAFNLGVRLKTSCDVGNNWYE 878 >UniRef50_B2A646 DNA polymerase I n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A646_NATTJ Length = 930 Score = 867 bits (2240), Expect = 0.0, Method: Composition-based stats. Identities = 348/947 (36%), Positives = 507/947 (53%), Gaps = 57/947 (6%) Query: 5 PQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 + +++DG+S L RA++A P L G T A+YG ML L+ P + AVVFD Sbjct: 8 ANDKFVVIDGNSLLNRAFYALPLLQTKQGFFTNAIYGFTTMLLKLVQDESPNYLAVVFDT 67 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 K KTFR F YK HR PD++R Q+ L +++AM + G EADD+IG + Sbjct: 68 KAKTFRHHKFPEYKGHRDKAPDEMRPQMPMLKELLEAMNINYFEKDGYEADDLIGAFTKI 127 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFL 180 A++ + ++ TGDKD+ QL+ T++ T E+V ++GV + +ID Sbjct: 128 AKQEDKETMVVTGDKDLLQLLDDKTTILLTKKGITQMESYDGEKVKEEFGVNVDKLIDLK 187 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 AL GD SDN+PGVPGVG+KTA LL G L+ LY + + G + +KL NK Sbjct: 188 ALTGDKSDNVPGVPGVGKKTALKLLNNYGDLEKLYKSLDGVGG-------KLQSKLADNK 240 Query: 241 EVAYLSYQLATIKTDVEL--ELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 + A+LS +L TI + L L QL + A+ + L +++E + A Q Sbjct: 241 DKAFLSKELVTIDCEESLIENLDWNQLSKFEIASPKARELLQEWEMNSILERLPASDEEQ 300 Query: 299 AKGAKPAAKPQETSVA-------DEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPV 351 K P + + +S E P + + + I D A L K Sbjct: 301 KKDQSPVNEGKTSSFNWDNFYYISEFPHENSDNLESELEKFIQDGNHKMALYRHLPKK-- 358 Query: 352 FAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPL-LE 410 T + G + Y+P + I+ + K E Sbjct: 359 ----LSTAKQKDSYPEPEGGLVVSINDLIFYVPEKLLSQVLAETIAPKLIKGNDKGTETE 414 Query: 411 DEKALKVG-QNLKYDRGILAN------YGIELRGIAF-DTMLESYILNSVAGRHDMDSLA 462 D LK+ N+K + N Y ++ F DT L +Y+L H ++ + Sbjct: 415 DAPKLKIASYNIKRIWHLFKNNTELDLYDLDTNKFLFYDTELMAYLLEPTEAPHSIEDMM 474 Query: 463 ERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGP 522 R+ F+ + + E + L L + L + + Sbjct: 475 NRYYG-----------------QFDLTPYGQDWQAVCERGAILLDLISPLEDIL-QERNQ 516 Query: 523 LNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSS 582 +++NIE+PL +L+R+E G+K+D +VL + RL+E+ K EIAGEEFNL+S Sbjct: 517 WQLYKNIELPLAFILARMEFRGIKVDARVLTEMEANIDHRLSEISTKIFEIAGEEFNLNS 576 Query: 583 TKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTD 642 KQL ILFEK + +KKT G ST + LE L+ DY + K++L+YR L KLK+TY Sbjct: 577 PKQLGYILFEKLQLPVVKKTKTG-YSTDAKTLETLSHDYEICKLLLDYRQLHKLKTTYLV 635 Query: 643 KLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE-DYVI 701 L +I+ TG++HT+Y+Q +TATGRLSSTDPNLQNIP++ EEGR+IR+ F+ D + Sbjct: 636 GLKDLISKTTGKIHTTYNQTITATGRLSSTDPNLQNIPIKLEEGRKIRKGFVIQNSDQLF 695 Query: 702 VSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAIN 761 ++ADYSQIELRI+AH+S D L+ AF E +DIH TAA+VF + VT E R AKA+N Sbjct: 696 LAADYSQIELRILAHVSEDTNLIQAFQEQQDIHTQTAAQVFEVESTQVTREMRSHAKAVN 755 Query: 762 FGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGR 821 FG++YG+S +GL+RQL I RK+A+ Y+D Y R+ GV EYM++ QAK GYVETL R Sbjct: 756 FGIVYGISDYGLSRQLGISRKQAKTYIDNYLTRFSGVKEYMDQIVNQAKMNGYVETLYNR 815 Query: 822 RLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAE--QPRVRMIMQ 879 R LPDI N R+AAER AIN P+QGTAADIIK AM+ V+ L+ + + +++Q Sbjct: 816 RRNLPDISHRNFNIRSAAERTAINTPIQGTAADIIKDAMVKVEKELEKQDLLDKAALLLQ 875 Query: 880 VHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 VHDEL+ E++K+ + VA ++ ++MEN L VPL V++ +G NW Sbjct: 876 VHDELILEINKEVLSDVATKVKEIMENIIELKVPLTVDLKTGPNWYD 922 >UniRef50_Q5HCC8 DNA polymerase I n=14 Tax=Rickettsiales RepID=Q5HCC8_EHRRW Length = 865 Score = 866 bits (2239), Expect = 0.0, Method: Composition-based stats. Identities = 334/920 (36%), Positives = 491/920 (53%), Gaps = 71/920 (7%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 ++D L+RAY+A P L+ S G P G +YG +NML I + + V FD GK Sbjct: 9 FTIIDAYGLLFRAYYALPHLSTSNGVPIGGVYGFINMLLKYIEVHTANYLVVAFDTGGKN 68 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK- 127 FR +++ YKS+R +P+DL +Q L V A+ + V+G EADDVI TL++ K Sbjct: 69 FRHDIYPQYKSNRIKLPEDLISQFPLLREAVNALNISYEEVAGYEADDVIATLSKNYSKF 128 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSS 187 G V + T DKD+ QL+ NI + + + N + ++V +K+G+ ++DFL+L GD+S Sbjct: 129 DGIKVTVVTSDKDLLQLLEHNIHIFDPVKNKYIVEDDVQDKFGISSSKLLDFLSLTGDTS 188 Query: 188 DNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSY 247 DNIPGVPG+G KTA LL G LD L ++P I + + ++ A LS Sbjct: 189 DNIPGVPGIGIKTAAKLLNNFGSLDNLLSQPHAIE------KNKCRESIIKYQDQAILSR 242 Query: 248 QLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAK 307 QL T+ V L+ E+ + P ++L+ KKYE + + A + Sbjct: 243 QLLTLCDTVNLDNNIEKYRSRIPDTQKLVKFLKKYELQSLINKIGKIFKTDAFTVYQKSG 302 Query: 308 PQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISAN 367 + ++ E LK +I + A D Sbjct: 303 YNNENSIKTNVIPYSS-------------EELKTFIENCKNEGTIALYI-----DITDNT 344 Query: 368 LVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGI 427 + +S + + G YI H AL+L+KPL + LKV ++K I Sbjct: 345 INSMSLSYKEGTILYINKEH----------ITHALDLIKPLFSLDHILKVMYDVKTLFKI 394 Query: 428 LANY-GIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTF 486 + I D ++ SY L++ H + ++ R + IT E I Sbjct: 395 IQEDTNIT---AFDDILIMSYSLDAGLHDHTLKNIIIRNIDKHDITNENIT--------- 442 Query: 487 NQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVK 546 A L LH + +L ++ ++ IE PL+ VL +E+ G+ Sbjct: 443 ---------------ASTLLSLHTALRRNLFTNQ-LCTIYYRIEKPLINVLHNMEKIGIM 486 Query: 547 IDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGA 606 ID +L S + +++ LE+K ++++GEEFN++S++QL TILF+K GIK KK G Sbjct: 487 IDGSILDKLSSTFSDKISVLEEKIYKLSGEEFNIASSRQLSTILFDKMGIKKGKKLSSGT 546 Query: 607 PSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTA 665 ST EVL ELA + + IL++R KLK+TYTD L I+ T RVHT Y T Sbjct: 547 YSTDAEVLHELAFNGVEIADEILKWRHFTKLKNTYTDVLAKQIDNNTSRVHTFYSMTSTV 606 Query: 666 TGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLT 725 TGRLSS++PNLQNIP+R+EEG IR AFIA Y ++SADYSQIELRIMAH++ + Sbjct: 607 TGRLSSSNPNLQNIPIRSEEGNAIRNAFIAKSGYKLISADYSQIELRIMAHIASVQAFRD 666 Query: 726 AFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQ 785 AF+ +DIH TA ++F + + + RR AK+INFG+IYG+S FGLA+QL I R EA Sbjct: 667 AFSLDQDIHLITAQQIF--NTQNIDKKLRRKAKSINFGIIYGISPFGLAKQLGITRSEAS 724 Query: 786 KYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAIN 845 K+++ YF+ YP + Y+E + A+ GY T+ GR+ ++ DI S+N A R +ERAA+N Sbjct: 725 KHIENYFKSYPEIKSYIEDIKVYARTHGYTRTVFGRKCFIKDINSNNHALRNFSERAAVN 784 Query: 846 APMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLME 905 AP+QGT+ADIIK +MI + L+ MI+QVHDEL+FEV +D VD K I ++ME Sbjct: 785 APLQGTSADIIKMSMIHLFDRLKTG----YMILQVHDELLFEVPEDHVDNTVKLIKEVME 840 Query: 906 NCTRLDVPLLVEVGSGENWD 925 +L VPL V++ G+NW Sbjct: 841 GIVKLSVPLKVDITIGDNWG 860 >UniRef50_UPI0001976BF8 DNA polymerase I n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=UPI0001976BF8 Length = 943 Score = 865 bits (2234), Expect = 0.0, Method: Composition-based stats. Identities = 314/950 (33%), Positives = 476/950 (50%), Gaps = 44/950 (4%) Query: 5 PQNPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 + L++VDG S +RA+ A P + AG+ T A++G ML ++ KP H AV F Sbjct: 12 TRGTLLVVDGHSLAFRAFFALPAENFSTQAGQATNAVWGFATMLSQVLDSEKPDHLAVAF 71 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 D KG TFR+E+ YK R P+DL Q+ + M+ A+G+ + G E DD+I TLA Sbjct: 72 DMKGGTFRNEMLPQYKGTREAAPEDLLTQLPLIQKMLTALGVTYVEKQGYEGDDIIATLA 131 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIID 178 E++G L+ +GD+D QL+ +T++ + + P+ V +KY V P D Sbjct: 132 AMGERSGYDTLVLSGDRDAFQLIDERVTVLYPGHHFKDLKHMTPQAVEDKYHVGPAQYPD 191 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 AL G+++DNIPGVPGVG+ A + GGL+ + ++I G L + Sbjct: 192 LAALRGETADNIPGVPGVGDGFAAKWINQYGGLEGIIEHADEIGG-------KKGESLRE 244 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 N E L+ ++ ++ DV+L + E L + A+ L LF EF T Sbjct: 245 NIEQVKLNRKVNALRRDVDLGIGIEDLTFGEVDADALSELFTSLEFGPRTR------SKV 298 Query: 299 AKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTET 358 K + + + E T+ + VTI DE L AWI D Sbjct: 299 LKSFNAGKRAGDAADKHADDENTSDDLRIPEAVTIADEAALAAWIDSARDGLGSPADNSD 358 Query: 359 DSLDN--ISANLVGLSFAI---------EPGVAAYIPVAHDYLDAPDQISRERALELLKP 407 D N A+++ + A+ PG + + + L+ Sbjct: 359 DEPRNRAHCADVMASTCALYAEGSSKPGNPGCSVLMLEVGGKAAVLEAGVIAGVRPALQR 418 Query: 408 LLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLK 467 L+ V K ILA+ G++L FDT L Y++ ++ A +L+ Sbjct: 419 FLDGHADRIVVHGYKEQSHILASLGLDLAEPWFDTKLAGYLVQPDYHADSLEQAASHFLQ 478 Query: 468 HKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFE 527 + +++A +G+ L+ + ++ + L + + + + + + Sbjct: 479 LQLDNADDVA-QGQLDLSGDVDPADQRKDLLHM--AMVRALADMLAAKIDE-REQFRLLQ 534 Query: 528 NIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQ 587 +IE+P+ VL +E+ G +D L + + + ++ A + AG NL S KQLQ Sbjct: 535 SIELPVSHVLFGMEQVGASVDFMRLTEMRDRFAIDARDAQETAWQFAGSRVNLQSPKQLQ 594 Query: 588 TILFEKQGIKPLKKTPGGAPSTSEEVLEELA-------LDYPLPKVILEYRGLAKLKSTY 640 +LF+ G+KP KKT G+ +T+ L++LA +L +R KLK Sbjct: 595 AVLFDDMGLKPTKKTKSGSYTTNASALQDLAVRSVGNERANGFLTALLRHRETNKLKQI- 653 Query: 641 TDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYV 700 L +NP GR+HT++ Q V ATGRLSS DPNLQNIP RN EGR IR AF+ E Y Sbjct: 654 VQSLIDAVNPDDGRIHTTFEQTVAATGRLSSVDPNLQNIPNRNAEGREIRSAFVPGEGYE 713 Query: 701 -IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKA 759 ++S+DYSQ+ELRIMA LS D L+ AF G D H+ A+ V+G+P++ +T +QR KA Sbjct: 714 SLLSSDYSQVELRIMADLSGDDALIEAFRSGADFHKYVASLVYGIPVDDITPDQRTHVKA 773 Query: 760 INFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLD 819 +++GL YG+S +GLA+QL I EA + YF + V EY+E A A+E+GY ET+ Sbjct: 774 MSYGLAYGLSTYGLAQQLKISPGEADRLKSQYFATFGKVHEYLESLVAGAREKGYTETMF 833 Query: 820 GRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQ 879 GRR Y P ++S N R AAER A+NAP+QG+AADI+K AMI L + R R+I+Q Sbjct: 834 GRRRYFPGLQSPNRNIRDAAERGALNAPIQGSAADIMKIAMIHASDALAKAKVRSRIILQ 893 Query: 880 VHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW-DQAH 928 +HDELV E+ + + V + ME+ L VPL V G G +W AH Sbjct: 894 IHDELVVEIAPGEAEQVTGLVRDAMEHAVDLAVPLDVSTGIGSDWQLAAH 943 >UniRef50_A0JWM3 DNA polymerase I n=7 Tax=Actinobacteria (class) RepID=A0JWM3_ARTS2 Length = 955 Score = 864 bits (2233), Expect = 0.0, Method: Composition-based stats. Identities = 315/932 (33%), Positives = 486/932 (52%), Gaps = 53/932 (5%) Query: 6 QNPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 Q L+++DG S +RA+ A P + +AG+ T A++G +ML +LI + KPTH AV FD Sbjct: 65 QPRLLVLDGHSMAFRAFFALPADKFSTAAGQHTNAIHGFTSMLINLIKEQKPTHVAVAFD 124 Query: 64 -AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 + T R + YK R P ++ QI+ + ++ A G+ + + G EADDV+ TLA Sbjct: 125 VSDETTHRKAEYSEYKGGRNETPREMSGQIDLIDKVMGAWGIKTIKMPGYEADDVLATLA 184 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPELIID 178 EKAG VL+ TGD+D QL+T N+ ++ L + KY V P D Sbjct: 185 AMGEKAGYEVLLVTGDRDAFQLITDNVFVLYPRKGVSDIPRLDAPAIQEKYFVSPAQYSD 244 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 AL+G+S+DN+PGVPGVG KTA + GGL+ + +KI G + L + Sbjct: 245 LAALVGESADNLPGVPGVGPKTAAKWINLYGGLEGVLEHLDKIGG-------KVGDSLRE 297 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 N + + +L + TD+EL +T + L +P L LF + EFK + A Sbjct: 298 NVDAVKRNRRLNRLHTDLELPVTLDDLADPRPDQAALEQLFDELEFKTIRTRLFALYG-- 355 Query: 299 AKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTET 358 A+E + +Y T L A++A Sbjct: 356 ---------------AEEVDLAERESLDIPDYSTPAGAAELSAFLAAGAGQRSAVAVDLV 400 Query: 359 DSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVG 418 A + + + G A YI ++ +A + ++ L D +A KV Sbjct: 401 PGRIGEDAAALAI---VRDGAAVYIDLSGQDAEAENVLA---------AWLRDPEAPKVM 448 Query: 419 QNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAG 478 K L+ G+EL G+ DT + Y++ +++ LA+ L + T +A Sbjct: 449 HGFKAALKALSARGLELEGVVDDTSISGYLIQPDRRTYELAELAQHHLNIEISTA--VAK 506 Query: 479 KGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLS 538 G+ +L+F+ AG A V L +L K + + +E+P+ VL+ Sbjct: 507 AGQLELSFDGDDSAAAGE-LVHAAAVVHALSRYFEAEL-KERKAEELLSTLELPVSQVLA 564 Query: 539 RIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKP 598 +E G+ ID + + +L + ++ A G E NL S KQLQT+LF++ + Sbjct: 565 DMELAGIAIDMQRMDEQLADLAKVIDNAQELAFAAIGHEVNLGSPKQLQTVLFDELQLPK 624 Query: 599 LKKTPGGAPSTSEEVLEELALD--YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVH 656 KK G +T L+ L + ++ +R +KL+ + L + + GR+H Sbjct: 625 TKKIKSG-YTTDAASLKNLLEKTGHEFLVQLMAHRESSKLRQM-LESLKKSV-AEDGRIH 681 Query: 657 TSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY-VIVSADYSQIELRIMA 715 T+Y Q V ATGR+SS +PNLQNIP+R+EEGRR+R F+ E Y ++SADYSQIE+RIMA Sbjct: 682 TTYAQNVAATGRISSNNPNLQNIPIRSEEGRRVRGIFVVSEGYECLLSADYSQIEMRIMA 741 Query: 716 HLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLAR 775 HLS D GL+ A+ +G+D+HR + +F +P + VTS R KA+++GL YG+++FGL++ Sbjct: 742 HLSGDAGLIQAYRDGEDLHRFVGSNIFHVPTDQVTSAMRSKVKAMSYGLAYGLTSFGLSK 801 Query: 776 QLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGAR 835 QL I EA+ M YF+R+ V +Y+ QA+ G+ T++GRR YLPD+ S++ Sbjct: 802 QLEISVDEARTLMKEYFDRFGAVRDYLRGVVDQARIDGFTATIEGRRRYLPDLTSTDRQL 861 Query: 836 RAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDA 895 R AER A+N+P+QG+AADIIKRAM+ V A L+A+ + RM++QVHDELV EV + +A Sbjct: 862 RENAERIALNSPIQGSAADIIKRAMLGVHAELKAQGLKSRMLLQVHDELVLEVAAGEREA 921 Query: 896 VAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 V K + + M + L VPL V++G G +W A Sbjct: 922 VEKLVTEQMGSAADLSVPLDVQIGVGPSWYDA 953 >UniRef50_Q4JW27 DNA polymerase I n=2 Tax=Corynebacterium jeikeium RepID=Q4JW27_CORJK Length = 859 Score = 864 bits (2232), Expect = 0.0, Method: Composition-based stats. Identities = 331/933 (35%), Positives = 484/933 (51%), Gaps = 88/933 (9%) Query: 8 PLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 L+L+DG S +RA++A P + G+ T A+YG L M +L+ + +PTH A FD Sbjct: 3 KLLLLDGHSLAFRAFYALPAANFSTVGGQHTNAVYGFLGMFLTLMDKEQPTHVAAAFDLS 62 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 G TFR+E F YK+ RP P++ + QIE + ++A+G+ L EADD+I TLA E Sbjct: 63 GPTFREESFPEYKAQRPSTPEEFKGQIELIRRTLEALGVTTLDKESYEADDIIATLATEG 122 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPELIIDFLA 181 K G VLI TGD+D QLVT ++T++ T+ P+ V KYGV P D A Sbjct: 123 AKDGMDVLICTGDRDSLQLVTEDVTVLYTLKGVSELHRFTPQAVEEKYGVTPTQYPDLAA 182 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 L GD+SDN+PGVPGVG KTAQ + G L + + I G + A L +N + Sbjct: 183 LRGDTSDNMPGVPGVGPKTAQKWIAKYGSLQGVIDNMDDIGG-------KVGANLRENID 235 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTA-DVEAGKWLQAK 300 L+ + + D++L + L E LG+F++ +F ++ Sbjct: 236 NVVLARDITEMVRDLKLVDDLDALSPHDIDPNEALGMFEELQFGTGLRNRAFKIMGVEFA 295 Query: 301 GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDS 360 + E L AW+ K + V D E + Sbjct: 296 DSAAVPVTVEKPK----------------------PGKLGAWLKKRTRGTVVDVDGEQLT 333 Query: 361 LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN 420 L + ++ D D ++ + L L + +A K + Sbjct: 334 LLDRDNVVI-------------------VQDLADVAPKDE--KALAEWLANPQATKWLHD 372 Query: 421 LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG 480 K L N G+ L G+ DT L +Y+L + + +R + H+ Sbjct: 373 SKKAYHTLQNQGLTLDGVEHDTSLAAYLLRPDVRTLSLADVVQRHVGHELSE-------- 424 Query: 481 KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI 540 G E A +L + P+++ G ++ ++E+PL +L+ + Sbjct: 425 --------------GATGPERAQAVAELVKALTPEIEAA-GQAELYFDLEVPLALILAAM 469 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGE-EFNLSSTKQLQTILFEKQGIKPL 599 E G+ +D L S++ RL E A E+AGE E NLSS KQLQ +LFE + Sbjct: 470 EHAGIAVDDAALQELSDDYGARLNEEIAAARELAGEPELNLSSPKQLQKVLFETFDLPKT 529 Query: 600 KKTPGGAPST--SEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHT 657 KKT G ST +E ++P ++ +R K+KST D L + GR+HT Sbjct: 530 KKTKTG-YSTAAAELEKLAAQSNHPFLGHLMAHREYQKMKST-IDGLIEAV-GDDGRIHT 586 Query: 658 SYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY-VIVSADYSQIELRIMAH 716 +++Q ATGRLSS+DPNLQNIPVR + GR+IR AF E Y +++ADYSQIE+R+MAH Sbjct: 587 TFNQKGAATGRLSSSDPNLQNIPVRTDAGRKIRAAFTVGEGYETLLTADYSQIEMRVMAH 646 Query: 717 LSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQ 776 LS D GL+ A+A G+D+H + VF +P++ VT E RR KA+++GL+YG+SAFGL++Q Sbjct: 647 LSEDAGLIEAYASGEDLHNYVGSRVFDVPVDEVTPELRRRVKALSYGLVYGLSAFGLSQQ 706 Query: 777 LNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARR 836 L I EA++ MD YFER+ GV Y++ AKE GY ETL GRR YLP++ SSN R Sbjct: 707 LKISAWEAKRIMDNYFERFGGVKRYLDHVVEVAKETGYTETLYGRRRYLPELNSSNRVAR 766 Query: 837 AAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAV 896 AERAA+NAP+QGTAADIIK AM+ VD + +Q R+++QVHDELV EV +++ + Sbjct: 767 ENAERAALNAPIQGTAADIIKLAMLRVDREITRQQLASRVLLQVHDELVVEVAPGELEQI 826 Query: 897 AKQIHQLMENCTRLDVPLLVEVGSGENWD-QAH 928 + + + M+ +L VPL V G+G+NWD AH Sbjct: 827 TELVEREMDAAAQLRVPLDVSAGTGDNWDLAAH 859 >UniRef50_Q7VGK4 DNA polymerase I n=8 Tax=Campylobacterales RepID=Q7VGK4_HELHP Length = 912 Score = 864 bits (2232), Expect = 0.0, Method: Composition-based stats. Identities = 306/926 (33%), Positives = 499/926 (53%), Gaps = 23/926 (2%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 N L ++D + +R+++A PPL N G PTG + G N+L+SL T+ A + G Sbjct: 2 NTLSVIDTFGFFFRSFYALPPLKNKEGFPTGLLVGFCNLLQSLYKDPSCTYLAFALEGGG 61 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 + R ++++ YK +R P P +L Q+ ++ MG +++ G EADDVI ++ + A Sbjct: 62 ENKRRQIYDAYKRNRQPPPQELLMQLPIAIEWIEKMGFLNISIEGYEADDVIASINKVAN 121 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDS 186 V I + DKD+ QL+ N + + + + E + KYGV P+ ID+ +L+GD+ Sbjct: 122 AQNIVVRIISHDKDLYQLIDENTYIYDPIGKRDIREAECLYKYGVNPKNFIDYQSLVGDT 181 Query: 187 SDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLS 246 SDNI G+ G+G K+AQ L+ G +++LY ++ + +A L + K A+LS Sbjct: 182 SDNIVGIKGIGAKSAQKLITHFGSIESLYERESELEEV---VTPRIAHLLREGKNNAFLS 238 Query: 247 YQLATIKTDVELELTCEQLEVQQPAA-EELLGLFKKYEFKRWTADVEAGKWLQAKGAKPA 305 +L T+ D+ + + + + ++L KKY+ K + V++ A+ Sbjct: 239 KKLVTLYDDLLENIDLSKCLMPESNPMLKILDELKKYDLKNIISKVQSPHERYAQKRSAQ 298 Query: 306 AKPQETSV-ADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNI 364 + D ++ + + L+A + + FD E+DSL+ Sbjct: 299 KGIGSLNDMPDVIESSSSAQSFSFKAHLLDNFTALEAVLDSIPSGAKIGFDCESDSLNMQ 358 Query: 365 SANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYD 424 ANLVG SF + A Y+PV H YL Q++ +A LK + +G NLK+D Sbjct: 359 EANLVGFSFCFDGENAYYVPVGHHYLGVGCQLTHTQAKIALKRIFT---YPLIGHNLKFD 415 Query: 425 R-GILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQ 483 I +E G +D+M+ ++ +S+A +D +W H I+F+ + K +N Sbjct: 416 LSLIFHTLELEHTGEIYDSMILGWLYDSIAPI-GLDKQMLKWFNHTMISFDSVVAKDEN- 473 Query: 484 LTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKG--PLNVFENIEMPLVPVLSRIE 541 F+Q+ + A +YAAEDA T +L+ ++ K + L + +E P + VL +E Sbjct: 474 --FSQVNIAAATQYAAEDAIATFRLYHRLEEVFYKREWSSILELANKLEYPFIKVLLAME 531 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 G+K+D +L + E+ + +++L + E+ GE FNL+S +QL ILF + G+K + Sbjct: 532 CEGIKVDIPLLESLKEKASEHISQLSAQIFELCGETFNLNSPQQLAHILFNRLGLKAGRS 591 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKT-GRVHTSYH 660 GG ST E L + +P+ +IL+YR + KLKSTY + L + R++TS+ Sbjct: 592 VKGGL-STDERTLLAIIDAHPVIALILDYREVNKLKSTYIEPLLRFGSANDKHRIYTSFL 650 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRD 720 Q+ TATGRLSS PNLQNIPVR EEGR+IRQAFI+ E + ++S DYSQIELR++AH +D Sbjct: 651 QSGTATGRLSSKSPNLQNIPVRREEGRKIRQAFISKEGHSLISIDYSQIELRLLAHFCKD 710 Query: 721 KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 L+ +F + KDIH TAA +FG+ + +++R AK+INFGLIYGM + LA+ L I Sbjct: 711 SSLIESFKQDKDIHFETAARLFGV---ELAAQKRAIAKSINFGLIYGMGSKKLAQTLQIS 767 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 KEA+ Y++ YF +P + ++ + E GY +TL G R Y +++ + Sbjct: 768 LKEAKNYIESYFALFPTIKNFLNAQKEFLLENGYSQTLLGHRRYFDFKNATDFMKANF-L 826 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 R IN+ QG+AAD+IK +M + +M++QVHDEL+FE ++ A++ Sbjct: 827 REGINSIFQGSAADLIKLSMCEIHKRYG--HSDFKMLLQVHDELIFEAPQEKAHIYAQEA 884 Query: 901 HQLMENCTRLDVPLLVEVGSGENWDQ 926 Q+M + L+VPL + G+NW + Sbjct: 885 AQIMNHIYELEVPLKCGISIGKNWAE 910 >UniRef50_Q1RH76 DNA polymerase I n=18 Tax=Rickettsia RepID=DPO1_RICBR Length = 871 Score = 863 bits (2229), Expect = 0.0, Method: Composition-based stats. Identities = 321/926 (34%), Positives = 515/926 (55%), Gaps = 59/926 (6%) Query: 5 PQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 +N L+L+DG +++RAY+A PLT+ GEP GA+YG +ML L+ +KP HAAVVFD+ Sbjct: 3 KKNTLLLIDGYGFVFRAYYAQQPLTSPKGEPVGALYGFTSMLLKLLNDFKPKHAAVVFDS 62 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 GK FR E++ YK++RPP P+DL AQ+ + + + + P+L +G EADD+I T A + Sbjct: 63 GGKNFRHEIYPEYKANRPPPPEDLIAQLPLVRDVARNLNFPILEKNGFEADDIIATFAAK 122 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMG 184 G V++ + DKD+ QL+ N+ + + + + + VV K+GV + + + +AL+G Sbjct: 123 TASIGEEVVVISSDKDLLQLMNDNVKIYDPLKAKYITEDNVVEKFGVTSDKLREVMALIG 182 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 D SDNIPGVP +G KTA +L+ G ++ ++ E+++ + L+ +KE A Sbjct: 183 DKSDNIPGVPSIGPKTASSLITQFGTVENIFNSLEQVSSI------KQRETLQNSKEAAL 236 Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304 +S+QL + +V+++ + LE P +L +Y FK E ++ K Sbjct: 237 ISWQLIGLDYNVDMDFKLDALEWSPPDHNKLTEFLHEYGFKSLYKRAENLFDIKISEHKE 296 Query: 305 AAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNI 364 + I ++ L+A+ K +K +F + NI Sbjct: 297 VIE-----------------EKAVEIKDISNKAELEAFAEKAKKVGIFGIYILQNKGANI 339 Query: 365 SANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYD 424 + LS + + A++ + E +++ LL D+ K+ +LK Sbjct: 340 AF---ILSLKNQAYIIKISNEANNLFTYNSKADNEWFTDIIFNLLTDQSIKKITYSLKPL 396 Query: 425 RGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQL 484 A+ ++ I D L +Y L++ + ++ Sbjct: 397 LKFYASRAQQITAIE-DLELMNYALSAGLPQKNL-------------------------- 429 Query: 485 TFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNG 544 F + E AA+ + L+ + +L+ +K +++ I++P+ V+ ++E+ G Sbjct: 430 -FEAVEKEATIEEAAKIVVGFIDLYQQTILELKDNKAFR-IYKEIDLPVCFVIDKMEKAG 487 Query: 545 VKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT-P 603 +K+D L+ S E + +LE++ ++G +FN+ S KQL ILFEK + K + Sbjct: 488 IKVDANYLNQLSSEFGAEILKLEEEIFVLSGMKFNIGSPKQLGEILFEKMQLPFGKTSAK 547 Query: 604 GGAPSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 + ST ++LE+L+ YP+ ++L +R L KLK+TYTD LP I+ T R+HT++ Q Sbjct: 548 ANSYSTGADILEKLSEQGYPIADLLLRWRQLTKLKNTYTDSLPKQIDNITRRIHTTFLQT 607 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKG 722 T TGRLSS +PNLQN+P+R+ EG +IRQAF+A + Y ++SADYSQIELRI++H++ K Sbjct: 608 STTTGRLSSQEPNLQNVPIRSGEGNKIRQAFVAEQGYKLISADYSQIELRILSHIADIKA 667 Query: 723 LLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRK 782 L AF DIH TA ++F L E +TSE RR AKAINFG+IYG+SAFGLA+QLN+ Sbjct: 668 LKQAFINKDDIHTQTACQIFNLQKEELTSEHRRKAKAINFGIIYGISAFGLAKQLNVSNT 727 Query: 783 EAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERA 842 EA +Y+ YF Y GV EYME T++ A+ GYV GR+ ++P I + AERA Sbjct: 728 EAAEYIKKYFAEYKGVQEYMEATKSFAQANGYVTDFFGRKCFVPLINDK--RLKQFAERA 785 Query: 843 AINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQ 902 AINAP+QGT ADIIK AM +D ++ + + R+++Q+HDEL+FE D+++ + I Q Sbjct: 786 AINAPIQGTNADIIKIAMTLLDREIEKRKLKTRLVLQIHDELLFEAPIDEIETIMPIIKQ 845 Query: 903 LMENCTRLDVPLLVEVGSGENWDQAH 928 +MEN T +DVP++ E+ +G NW + H Sbjct: 846 IMENSTNMDVPIITEIRAGNNWMEIH 871 >UniRef50_B8DUU4 DNA polymerase I n=16 Tax=Bifidobacterium RepID=B8DUU4_BIFA0 Length = 960 Score = 860 bits (2223), Expect = 0.0, Method: Composition-based stats. Identities = 304/964 (31%), Positives = 466/964 (48%), Gaps = 50/964 (5%) Query: 3 QIPQNPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 Q + L+++DG S +RA++A P + G+ T A+YG ML +I KP V Sbjct: 6 QGTRGTLLVIDGHSLAFRAFYALPAENFSAKDGQATNAVYGFFTMLSQVIASQKPDLLGV 65 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 FD KG TFR+++ YK R P++L +QI + M++A G+ + G E DDVI T Sbjct: 66 AFDVKGGTFRNKMLTQYKGTREAAPEELISQIPLIQDMLEAFGVTYVTKQGYEGDDVIAT 125 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELI 176 LA E A + +GD+D QL+ +IT++ + + P+ V +KY V P Sbjct: 126 LATMGEHADYRTYVLSGDRDAFQLIDDDITVLYPGYHFKELKAMTPQAVEDKYHVTPRQY 185 Query: 177 IDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKL 236 D AL G+++DNIPGVPGVG+ A + GGLD + ++I G L Sbjct: 186 PDLAALRGETADNIPGVPGVGDGFAAKWINQYGGLDGVIEHADEIKG-------KKGDAL 238 Query: 237 EQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTA-DVEAGK 295 ++ E L+ ++ + D++L + L + + LF + F + Sbjct: 239 RESIEQIRLNRKVNALVRDLDLGVDIADLTFGKVDPAKAEELFNQLNFGARIRSKLLKTF 298 Query: 296 WLQAKGAKPAAKPQETSVADEAPE--------VTATVISYDNYVTILDEETLKAWIAKLE 347 G A K + + E + + I +L+AW + Sbjct: 299 NAGDPGQPVAKKASDAERFEFEGEFDDGSFDTPESVRVQEPVVDEIDAPASLEAWAQQHC 358 Query: 348 K--------APVFAFDTETDSLDNISANLVGLSFAI------EPGVAAYIPVA--HDYLD 391 + E D+ V S+++ +PG ++ +A D Sbjct: 359 PIASGKSISSTTLDVVGEYDAQSQQCVEAVEGSWSLFASGSPKPGRSSISGLALMADGHA 418 Query: 392 APDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNS 451 E+ L+ +L+ A K +L + L + FDT L Y+++ Sbjct: 419 VVVDPHDEQYHMALQRILDTYAATLSVHGYKEHLHMLGAVNLRLPMVLFDTNLAGYLIDP 478 Query: 452 VAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLK 511 + A+ +L E +G + + E + +A + L Sbjct: 479 DFQGGSLQDCADHFLHRHAEEVTETE-QGTLDIGMDDERAERDRK-VVRNAAIVSLLART 536 Query: 512 MWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAH 571 + L++ + ++ +IE+P L +E G +D L E T +E+ + Sbjct: 537 LARQLEQ-RCQYSLLRDIELPTSVALFHMEHTGASVDRARLDELLEMFTDESNRMEQICY 595 Query: 572 EIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEEL-------ALDYPLP 624 E AG E NL S KQL +LFE+ G+ P KKT G+ ST+ + L L + Sbjct: 596 EAAGHEVNLQSPKQLGVVLFEEMGLNPTKKTKRGSYSTNAKALTTLYATSEEGSRPNEFL 655 Query: 625 KVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNE 684 +L +R + KL+ L INP+ GR+HT++ Q V ATGRLSS DPNLQNIP RN Sbjct: 656 GALLRHREVNKLRQI-VQTLIDAINPRDGRIHTTFTQTVAATGRLSSVDPNLQNIPNRNA 714 Query: 685 EGRRIRQAFIAPEDYV-IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFG 743 GR IR AF+ E + ++SADYSQ+ELRIMA LS D+ L+ AF G D HR A+ V+G Sbjct: 715 TGRDIRSAFVPGEGFADLLSADYSQVELRIMADLSGDEALIKAFKSGADFHRYVASMVYG 774 Query: 744 LPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYME 803 +P++ VT +QR KA+++GL YG+S +GL++QL IP KEA YF+ + V +Y+E Sbjct: 775 IPVDEVTPDQRNHVKAMSYGLAYGLSTYGLSQQLGIPSKEAAALRSRYFQTFGKVHDYLE 834 Query: 804 RTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAV 863 + A+ GY +T+ GRR Y P + S+N R AAER A+NAP+QGTAADI+K AMI V Sbjct: 835 SLVSNARNTGYTQTMFGRRRYFPALTSANRVARDAAERGALNAPIQGTAADIMKIAMIRV 894 Query: 864 DAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGEN 923 D L+ R+++Q+HDELV E+ + V + + ME+ + VPL V G G + Sbjct: 895 DRALRDGNLNSRIVLQIHDELVVELAPGEEKRVTELVRDAMEHAVNIAVPLDVSTGVGSD 954 Query: 924 WDQA 927 W QA Sbjct: 955 WQQA 958 >UniRef50_UPI00016BFC66 DNA polymerase I n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016BFC66 Length = 865 Score = 859 bits (2220), Expect = 0.0, Method: Composition-based stats. Identities = 337/927 (36%), Positives = 492/927 (53%), Gaps = 71/927 (7%) Query: 8 PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 ++LVDG S YRA++ P L+ G T A+YG L +L +L+ ++P AV FD Sbjct: 2 KIMLVDGFSIAYRAFYGMPLLSTKEGIFTNAIYGFLKILFNLLDTHQPDALAVAFDFAAP 61 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 TFR + YK+ R PMP +L+ QI L ++ AMG+ ++ G EADD++GTLA A Sbjct: 62 TFRHQYALTYKATRKPMPSELQPQIPLLQDLLSAMGISHISAPGFEADDILGTLATAAAA 121 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTNTILGP------EEVVNKYGVPPELIIDFLA 181 A VLI +GD+D+ Q+ T +I + T +VV KYGV P +ID A Sbjct: 122 AKHDVLIVSGDRDLLQIATDSIQIXIPKTKQTGTEIESYYAADVVAKYGVIPTELIDVKA 181 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGD+SDNIPGV GVGEKTA L+ +DTLYA E I G + L K+ Sbjct: 182 LMGDASDNIPGVKGVGEKTALKLIAEYKNIDTLYANLENIKGA------KLKENLATYKD 235 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 AY S LATIK D+ + T + + + LF+K EFK A Sbjct: 236 SAYDSKFLATIKIDIPINFTLQDFSFKLEDNLAVRELFEKLEFKSLLTKFSAI------- 288 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 A + + VT+ L E D+L Sbjct: 289 ------------------PAAPQVDVASIVTVSTTSVLADL-----DTAAVFAVLENDTL 325 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 + G Y A+ +++E + +K E + K+ N Sbjct: 326 Y----------MGVADGSNCYFIAAN--------LAQEYDIIAVKNFFEAKNISKILHNS 367 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 K R IL Y I + G FDT + SY++N + +++ A + +++ G GK Sbjct: 368 KDLRHILYRYQINIHGNIFDTAIASYLINPLQSDYELSVAA---TGYDIKHVDQLLGTGK 424 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 N++T+ +A A L +L L++F +IEMPL+ VL +E Sbjct: 425 NKITWASLASXIIVAQLGARASAMWTLQTAQLKEL-TDASMLDLFYDIEMPLIEVLFDME 483 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 G+ +D L ++L +A LE+ + +A E+FN+SS+KQL ILF+K GI KK Sbjct: 484 IAGITVDAAFLTAFGKKLDALIATLEQDIYSLADEKFNISSSKQLGLILFDKLGIPAGKK 543 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 T G ST+ +L++L Y + +LEYR KL STY L +++ K ++H++++Q Sbjct: 544 TKTG-YSTAANILDKLKDKYVIVAKVLEYRQYKKLHSTYVVGLLKLLD-KNNKLHSTFNQ 601 Query: 662 AVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQIELRIMAHLSRD 720 VTATGR+SS +PNLQNIP+R G+ IR+AFI +DYV + ADYSQIELR++A LS D Sbjct: 602 TVTATGRISSAEPNLQNIPIRLALGKEIRRAFIPSNDDYVFLDADYSQIELRVLASLSAD 661 Query: 721 KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 + AF EG DIH +TA+EVFG+ +TVT QR +AKA+NFG++YG+SAF LA + + Sbjct: 662 ANMQRAFLEGIDIHTSTASEVFGV--DTVTQAQRNAAKAVNFGVVYGISAFSLADDIQVS 719 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 +EA +Y++ YF +YP V Y++ ++ GY TL R+ + ++ SSN + + Sbjct: 720 NQEATEYIENYFAKYPNVKHYLDSLITTSQATGYGVTLLNRKRNIVELFSSNFNTKEYGK 779 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 R A+N P+QGTAADIIK+AMI V L+ R +I+ VHDEL+ EVHK +++ + K + Sbjct: 780 RIAMNMPIQGTAADIIKKAMIQVHNALK--GTRSTLILTVHDELLLEVHKSEIEHITKLL 837 Query: 901 HQLMENCTRLDVPLLVEVGSGENWDQA 927 ME+ +L VPLLV+V SG +W A Sbjct: 838 KTEMESAVKLAVPLLVDVKSGXSWFAA 864 >UniRef50_B6WQX5 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WQX5_9DELT Length = 919 Score = 858 bits (2218), Expect = 0.0, Method: Composition-based stats. Identities = 322/942 (34%), Positives = 496/942 (52%), Gaps = 48/942 (5%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + P+ L+DGS+++YR + A + S G PT ++ V +L ++ + +P + A V D Sbjct: 9 LAAEPVFLMDGSAFIYRGFFANRNMQRSDGFPTNSLVVVSRVLLRILREERPRYFAFVQD 68 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 KG FR E+F YK++R P+DL Q++P+ MV+A+GL L G EADD I +LA Sbjct: 69 GKGPNFRHEIFPLYKANRDATPEDLVRQLDPIQRMVRALGLRLEVSQGCEADDCIASLAA 128 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN--TILGPEEVVNKYGVPPELIIDFLA 181 PV+I +GDKD+ Q + PN+ + + + ++ + + GV P D A Sbjct: 129 RFAGE-HPVIIVSGDKDLKQCLGPNVYMWDPASKEEKLVSEADFTAESGVTPGQWPDVQA 187 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 L+GD+SDNIPGVPG+G KTA+ + L+ + + AKL+++ E Sbjct: 188 LIGDTSDNIPGVPGIGPKTARQIFSICPSLEDIRDH-------FVLLPPKLQAKLQEHLE 240 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 ++ QL T+ + +T + L V+ A L +++E ++ A LQA Sbjct: 241 NMFIWRQLTTLSREACPGVTLDDLRVRPLDAATCALLTEEFELFALRRELAALDRLQAAE 300 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKA--------WIAKLEKAPVFA 353 A + + E A + ++ + ++ + + + A Sbjct: 301 ADLPEEFLDAGSIREDARPAAGKKAAAEQASLPLAQPARSGRATSQMSLLDAMPQESAPA 360 Query: 354 FDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEK 413 D + D A V L +A A Y+ V + + + L L Sbjct: 361 LDDVSALPDCGDAR-VALIWAHGDREAPYLAVEGADGGSLGEWQWTGPVAELARWLA-PA 418 Query: 414 ALKVGQNLKYDRGILANYGIELRGI---AFDTMLESYILNSVAGRHDMDSLAERWLKHKT 470 V +LK + L G D + +Y+LN + L+ RW Sbjct: 419 RTLVTADLKGLLTSAPCWQF-LAGRAADCIDLGVAAYLLNPEENDYGWPRLSARWGAV-- 475 Query: 471 ITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIE 530 + LE G A+ A + L + ++K G L +F +E Sbjct: 476 ----------------LRHELESRGETASGPARLGLAMAQLFEQRMEK-DGLLELFRRLE 518 Query: 531 MPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTIL 590 MPL+PVL+ +E++GV ID +++ +L +L +E+AG +FN+ S +QL +L Sbjct: 519 MPLLPVLAGMEQSGVAIDAAAFRAFLDDVQGQLDQLTAHVYELAGTQFNIRSAQQLGDVL 578 Query: 591 FEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINP 650 F G+ +KT GG STS++ LE+LA +P+ IL+YR L K++STY D LP +++P Sbjct: 579 FNGLGLPAPRKTKGGQASTSQQTLEKLAGQHPVVDSILQYRKLEKMRSTYLDPLPRLVDP 638 Query: 651 KTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIE 710 + GR+HT+++Q TATGRLSS++PNLQNIPVR G+R+R FIA ++VSADYSQ+E Sbjct: 639 Q-GRIHTTFNQKATATGRLSSSNPNLQNIPVRGPLGKRMRSCFIAGPGRLLVSADYSQVE 697 Query: 711 LRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSA 770 LR++AH+S+D LL AF G+DIH TAA V+ LP + V+ +QRR+AK INFGLIYGM A Sbjct: 698 LRVLAHVSQDPALLEAFRNGEDIHARTAALVYDLPPDQVSPDQRRNAKTINFGLIYGMGA 757 Query: 771 FGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKS 830 LA++L I +A+ ++ YFER G+ E+ E A A++ G+V TL GRR LPDI S Sbjct: 758 QKLAQELKISTTQAKDFIARYFERLQGLKEFYEGVEASARKHGFVTTLGGRRRLLPDINS 817 Query: 831 SNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHK 890 ++G A A R AIN +QG+AADIIK AM+AV + + R+++QVHDEL+ EV Sbjct: 818 ASGQAAALARRQAINTVIQGSAADIIKLAMLAVARDERLRELDARLLLQVHDELLLEVPA 877 Query: 891 DDVDAVAKQIHQLMENCT----RLDVPLLVEVGSGENWDQAH 928 D + + +LM++ L VPLLV+ G+G +W AH Sbjct: 878 DAAEEAGALVARLMQDVCPAGKELSVPLLVDWGTGHDWGAAH 919 >UniRef50_A9KNZ3 DNA polymerase I n=4 Tax=Firmicutes RepID=A9KNZ3_CLOPH Length = 994 Score = 858 bits (2216), Expect = 0.0, Method: Composition-based stats. Identities = 329/990 (33%), Positives = 513/990 (51%), Gaps = 88/990 (8%) Query: 9 LILVDGSSYLYRAYHAFPP-------------------LTNSAGEPTGAMYGVLNMLRSL 49 L+++DGSS L + P + + G T A+YG L +L + Sbjct: 21 LLVIDGSSLLSTQFFGNLPKEIMFAKTMEEKEKYFPKIMQTATGVYTNAVYGFLRVLLKI 80 Query: 50 IMQYKPTHAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAV 109 I KPT+ AV +D TFR E++ YK +R + L+ Q + ++K MG+ Sbjct: 81 IKDQKPTYLAVAWDISRNTFRREIYPDYKGNRGETLEPLKDQFKLCQHVLKEMGIVQFMD 140 Query: 110 SGVEADDVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLIN---------------- 153 EADD GTL ++ E+ P+ + T D D QL+T L Sbjct: 141 ERYEADDFSGTLCQKFEEE-VPIRVMTKDNDYLQLITERTNLWLIHSTAKKTDELYEKYG 199 Query: 154 --------TMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALL 205 + PE V ++G+ P + + GDSSDNI GVPGVGE TA AL+ Sbjct: 200 LSKKELNVPDRTFLFTPELVEKEFGIEPSSVPSLKGIGGDSSDNIKGVPGVGEATAVALI 259 Query: 206 QGLGGLDTLYA---EPEK--------------IAGLSFRGAKTMAAKLEQNKEVAYLSYQ 248 + ++ LY ++ I ++ ++ A LS Sbjct: 260 KEYKTVENLYEILNNLDETGKKEINEYWKTLGIKRTPINALLKISDTELVGEKAAILSKT 319 Query: 249 LATIKTDVEL-ELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAK 307 LATIK D++L +L EQL + E F + EFK D + + A Sbjct: 320 LATIKKDIDLKDLGLEQLRIH-INTENAQKCFNELEFKTIKMDNAEVEDSSINNLRFEAD 378 Query: 308 PQETSVADEAPEVTATVI----------SYDNYVTILDEETLKAWIAKLEKAPVFAFDTE 357 + + E E + + + D+ K I +++K + D Sbjct: 379 KIKITSNLEEVETLFSNLIKLWEKNQKKLKKTKKSRNDKSDSKITIKEIKKPEYASEDAV 438 Query: 358 TDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKV 417 L + +LVG+S + IP I+ + L LLE +K Sbjct: 439 GIKLIMENKSLVGISVYYGSEASFIIP-------CEGFITPDFLTSKLNGLLE-KKITLA 490 Query: 418 GQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIA 477 ++K L FD + Y+L A ++ ++AE++L+ + +E+ Sbjct: 491 IFDIK---KYLPYLNANEESPCFDVTIAGYLLEPDASTYEYQTIAEKYLELDLPSEKEVF 547 Query: 478 GKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVL 537 G+ + + + ++ + A ++ V ++ + L +G L +F IEMPLV L Sbjct: 548 -SGQTYASLSLLDQDQYKKAACYESYVAHHIYPVLL-KLLSERGLLPLFAGIEMPLVYTL 605 Query: 538 SRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIK 597 +E+ G+++D L ++S++L + + ELEK+ E+ G EFN++S KQL ILF++ G+ Sbjct: 606 YDMEQRGIRVDTNGLKDYSDQLGVSIVELEKQIFELVGVEFNINSPKQLGEILFQRLGLS 665 Query: 598 PLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHT 657 KKT G STS EVLE+L+ ++P+ K+IL+YR L KLKSTY D L + GR+H Sbjct: 666 YGKKTKTG-YSTSAEVLEKLSSEHPVIKLILQYRQLTKLKSTYADGLVSYV-EGDGRIHG 723 Query: 658 SYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHL 717 +++Q + ATGRLSST+PNLQNIP+R E GR+IR+ FI + Y+ + ADYSQIELR++AH+ Sbjct: 724 TFNQTIAATGRLSSTEPNLQNIPIRMELGRKIRKVFIPEDGYLFLDADYSQIELRLLAHM 783 Query: 718 SRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQL 777 S D L+ A+ + +DIHR TA+EVF P + VTS QR +AKA+NFG++YG+S+F L + L Sbjct: 784 SNDARLIEAYRQAQDIHRLTASEVFHTPFDEVTSAQRSNAKAVNFGIVYGISSFSLGQDL 843 Query: 778 NIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRA 837 +I RKEA++Y++ YF YPGV Y++ + KE G V+TL GR +P++ +SN +R+ Sbjct: 844 DITRKEAEEYINKYFMTYPGVKTYLDGLIEEGKETGVVKTLYGRIRPVPNLTNSNFMKRS 903 Query: 838 AAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVA 897 A ER A+N+P+QGTAADI+K AMI V+ L+ + + R+++Q+HDEL+ E H+ +V+ VA Sbjct: 904 AEERIAMNSPIQGTAADIMKLAMIHVNQVLKERKLKSRLLLQIHDELLVETHESEVEEVA 963 Query: 898 KQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 K + + M+ L VPL VEV +G NW +A Sbjct: 964 KIMKEEMQQAASLSVPLEVEVANGNNWYEA 993 >UniRef50_C0E901 Putative uncharacterized protein (Fragment) n=2 Tax=Clostridiales RepID=C0E901_9CLOT Length = 890 Score = 854 bits (2208), Expect = 0.0, Method: Composition-based stats. Identities = 302/922 (32%), Positives = 469/922 (50%), Gaps = 77/922 (8%) Query: 8 PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 ++ VDG+S L R+Y+ L+NS G PT A++G N++ +I + +P AV FD Sbjct: 42 KVLAVDGNSILNRSYYGVRNLSNSKGVPTNAVFGFFNVMDKMIKEVEPDCVAVAFDLSAP 101 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 TFR + ++ YK+ R MP++L Q+ +++ G ++ G EADD++GT AR + Sbjct: 102 TFRHKQYDGYKAGRKGMPEELAVQLPITKELIQLFGYHIVECEGFEADDIMGTFARLCRE 161 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTNT--ILGPEEVVNKYGVPPELIIDFLALMGD 185 +I+TGD+D QLV +T+ + +++V +YGV P +I+ ALMGD Sbjct: 162 QKAECVIATGDRDNLQLVGDGVTVRLATNKEAILFDTDKIVQEYGVTPPELIEVKALMGD 221 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 SSDNIPGV G+GEKTA +L+ + + +++ + A +E+A + Sbjct: 222 SSDNIPGVKGIGEKTALSLVSKYHSVSYILDHAQELDATTRVKNLLSAE---GARELAEM 278 Query: 246 SYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPA 305 S L TI + ++ V L +F + E K++ + Sbjct: 279 SRMLGTIVDNAPIDGDLSHYAVGPRDDAGLYRIFSELELKKFLERYHLQPGNEPA----- 333 Query: 306 AKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNIS 365 A + T+L + + + + F +E L N+ Sbjct: 334 ---------------PAPEKQPKKHFTVLQNPSAEQIREQFGDSVDF-LYSEGLLLLNLG 377 Query: 366 ANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDR 425 +V +F A + L+ K K Sbjct: 378 DTIVEYNF--------------------------DAESAFQALVLQNDRPKRTHGAKELY 411 Query: 426 GILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLT 485 G +L + F T L +Y+L+++A + + L E++L Sbjct: 412 KRCFENGEQLTNLVFSTDLAAYLLDALAKGYALGGLIEKYLP-----------------D 454 Query: 486 FNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGV 545 F E AA A L + +L ++ +IE+PL VL+ +E G Sbjct: 455 FRCDVEERYKEIAAFPA-----LCDALSKEL-TEWEMGSLLHDIELPLSEVLANMENEGF 508 Query: 546 KIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGG 605 ++D + E L + + + ++ + AGEEFN++ST++L ILF+K G+ KKT G Sbjct: 509 QVDVAGVRTFGEMLQVEIERITQEIYGYAGEEFNINSTRELGAILFDKLGLPTGKKTKTG 568 Query: 606 APSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTA 665 ST+ +VLE+L +P+ ++LEYR L KL STY L + P RVH+ + Q T Sbjct: 569 -YSTNVDVLEKLIPKHPIAGLVLEYRKLTKLSSTYVTGLLKVTGP-DQRVHSVFRQTETR 626 Query: 666 TGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLT 725 TGR+SST+PN+QNIP+R E G ++R+ F+A V++ ADYSQIELRI+AH+S D ++T Sbjct: 627 TGRISSTEPNMQNIPIRTELGSQMRKFFVAKPGCVLLDADYSQIELRILAHISNDSRMIT 686 Query: 726 AFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQ 785 AF EG DIH ATA++VFG+P E + +E RR AKAINFG++YG+ A+ L++ +N+ EA+ Sbjct: 687 AFREGADIHTATASQVFGVPAEVLPAELRRRAKAINFGIVYGIGAYSLSQDINVSVAEAK 746 Query: 786 KYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAIN 845 +Y++ Y Y GV +YM + + GYV+T+ GR +LP+I SSN +A ER A+N Sbjct: 747 EYIENYLHTYSGVRQYMNDIVESSAKSGYVKTMFGRVRHLPEITSSNHNTKAFGERVALN 806 Query: 846 APMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLME 905 P+QGTAADIIK AM+ V L+ E ++I+QVHDEL+ EV K D + + ME Sbjct: 807 TPIQGTAADIIKIAMVKVYRRLKEEGLSAQLILQVHDELLIEVSKADAPRAKVILKEEME 866 Query: 906 NCTRLDVPLLVEVGSGENWDQA 927 + L VPL V+V GENW A Sbjct: 867 HAADLSVPLSVDVSEGENWYDA 888 >UniRef50_C5CBM1 DNA polymerase I n=2 Tax=Micrococcus luteus NCTC 2665 RepID=C5CBM1_MICLC Length = 937 Score = 854 bits (2206), Expect = 0.0, Method: Composition-based stats. Identities = 318/955 (33%), Positives = 486/955 (50%), Gaps = 60/955 (6%) Query: 5 PQNPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 L+++DG S +RA++A P G+ T A+YG ML ++I Q +PTH AV F Sbjct: 9 APQRLLVLDGHSMAFRAFYALPAENFATDTGQHTNAVYGFTAMLLTMIRQQRPTHVAVAF 68 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 D G TFR E + YK+ R P + QIE +++A+G+P L + G EADD++ TL+ Sbjct: 69 DLSGPTFRSEEYAEYKAGRSETPAEFAGQIELTVKVMEALGIPTLTLEGYEADDIVATLS 128 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI----LGPEEVVNKYGVPPELIID 178 AE+AG ++ +GD+D QL++ T++ + + V+ KYGV P + Sbjct: 129 ARAEEAGWEAVVVSGDRDAFQLISERTTVLYPKKGVSDIPPMDADAVLAKYGVAPAQYPE 188 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 AL+G+++DN+PGVPGVG A L+ G LD + A +I G L + Sbjct: 189 LAALVGEAADNLPGVPGVGPGFAAKWLKQYGDLDGVLAHAHEITG-------KKGEALRE 241 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 + E + +L + D++L + E + ++ P E + LF +F R V + Sbjct: 242 HLEDVRRNRRLNALVRDLDLPIGLEAMRLEMPEREPVEELFDALQFNRIRERVFEVFGER 301 Query: 299 AKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIA-KLEKAPVFAFDTE 357 P + + EA E ++A++A + D E Sbjct: 302 VGEDAPPPEVEAAPEFTEA----------------TTAEDVRAFLAAEAGTLLGVHVDVE 345 Query: 358 TDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKV 417 +L V +F GVA A ++ + ++ L + K Sbjct: 346 GPALLPRRKVPVPGTFGTPVGVALVGEHAGLHVTLDGDAPDPALVAAVREALGEGGLAKA 405 Query: 418 GQNLKYDRGILAN------YGIE--LRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHK 469 +LK LA G + L G+ D +L +Y++ +++LAE L H Sbjct: 406 VHDLKRTLKALAAPTEGDGLGPDAALDGVVDDVLLSAYLIQPDRRDTSLEALAEAHL-HT 464 Query: 470 TITFEEIAGKGKNQLTFN------QIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPL 523 + + + Q TF+ A A V +L + P + +G Sbjct: 465 PLAAPREPAQQRAQGTFDLDGGQAAADRAARAADAVRAAWVVRRLSTQFTPQVL-DRGAQ 523 Query: 524 NVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAH-----EIAGEEF 578 + + +E+PL +L+R+E G+ +D L + E+ T ++ A E G + Sbjct: 524 RLLQELEIPLSRLLARMELAGIAVDVDALTDLREDFTAAADAAKESAWASVAEETGGMQV 583 Query: 579 NLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALD--YPLPKVILEYRGLAKL 636 NL S KQLQ +LFE+ + +KT G ST + L++L +P + ++ +R KL Sbjct: 584 NLGSPKQLQEVLFERLNMPRTRKTKTG-YSTDVDSLQDLLEQTRHPFLENLMAHRDATKL 642 Query: 637 KSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP 696 + T + L + P R+HT+Y Q ATGRLSS PNLQNIPVR E GRRIR+ F+A Sbjct: 643 RQT-VEGLLETVAPDD-RIHTTYSQTAAATGRLSSLHPNLQNIPVRTEAGRRIREVFVAD 700 Query: 697 E----DYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSE 752 E V++SADYSQIE+RIMAHLS D+GL+ AF EG+D+H ++VFG+ + VT+E Sbjct: 701 EVAGEQAVLLSADYSQIEMRIMAHLSEDEGLIQAFREGEDLHSFVGSQVFGVDPDEVTAE 760 Query: 753 QRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQ 812 QR KA+++GL YG+S+FGL++QL I EA+ M YF+R+ GV +Y+ AQA++ Sbjct: 761 QRAKVKAMSYGLAYGLSSFGLSKQLKISVDEARGLMKGYFDRFGGVRDYLRDVVAQARQD 820 Query: 813 GYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQP 872 GY T++GRR YLPD+ S N R AERAA+NAP+QG+AADIIKRAM+ V A L+ Sbjct: 821 GYTSTIEGRRRYLPDLSSDNRQLRDMAERAALNAPIQGSAADIIKRAMLDVQAGLEEHGL 880 Query: 873 RVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 R+++QVHDEL+ EV +++ + + M L VPL V VG G +W A Sbjct: 881 ASRLLLQVHDELILEVPAAELEQATALLEERMGRAAELSVPLDVHVGRGRSWHDA 935 >UniRef50_UPI0001C32326 DNA polymerase I n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C32326 Length = 884 Score = 851 bits (2200), Expect = 0.0, Method: Composition-based stats. Identities = 305/928 (32%), Positives = 473/928 (50%), Gaps = 73/928 (7%) Query: 5 PQNPLILVDGSSYLYRAYHAFP-PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + L L+DG+S YRA+ A P + S G PT A++G +ML ++ +Y P V +D Sbjct: 24 KPDELFLIDGNSLAYRAFFALPESIATSTGFPTNAIFGFASMLVKILTEYGPRATIVAWD 83 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 R E++ YK+ R PD + Q L +V++ G +++ G EADDVI TLA Sbjct: 84 RGHSG-RREVYPEYKAQRSSRPDLFKQQWPHLEPLVESFGYQNVSLDGYEADDVIATLAE 142 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDF 179 A+ AG PV++ TGD+D QLV + ++ T + V+++YG+PPEL+ DF Sbjct: 143 RAKAAGIPVMVVTGDRDSFQLVDEGVQIMATSRGITETRTYDRQGVIDRYGIPPELVPDF 202 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 + L GD+SDNIPGVPG+G+KTA LL G L+ + A I A+ L ++ Sbjct: 203 IGLKGDTSDNIPGVPGIGDKTAAQLLNDFGDLEGVLANAHTI------RARKRRENLIEH 256 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 E A +S QLAT++ D+E+ + + +P L F+++E + +E Sbjct: 257 AEDARVSKQLATMRRDLEVAIDVAAVHGAEPDRSRLRETFREFELRDPLRRLE------- 309 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 + + A+ A + + ++ A A+ + P A E+D Sbjct: 310 EALGDGDEAAPRPQAERAIGAKLRTGAVADLASLAPAGGEIALAAREPEKPDDALFGESD 369 Query: 360 SLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQ 419 F G A + L + E Sbjct: 370 ----------AWRFGAYAGQ---------DALAGECGGDAGPEVLAAAIGERPAL---AH 407 Query: 420 NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 + K R + +A DT++ +Y+L + +D L E E G Sbjct: 408 DAKALREV-------PATLAHDTLIAAYLLEPARRSYPLDELTE----------ERGIGT 450 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 + L P L + + L +F+++E+PLV VL Sbjct: 451 DVEDAAAADA-------------ILVHALTAAQRPQL-EERELLPLFDDVELPLVRVLRA 496 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 +E G+++D ++L + LE++ E+ GEEF + S +QL ILFEK G+ Sbjct: 497 METAGLRLDTELLATIRTRVMDEAVALEREIWELTGEEFMIGSPQQLGQILFEKLGLSRK 556 Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 ++ G ST VL+ + ++P+ + I +R L KL STY D LPL+I+P+ R+HT++ Sbjct: 557 RRGKTG-YSTDARVLQAIRGEHPVIEKIERWRELTKLASTYLDALPLLISPEDHRLHTTF 615 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSR 719 +Q ATGRLSST+PNLQNIP+R GR IR F+A V++SADYSQ+ELR++AH++ Sbjct: 616 NQVTAATGRLSSTNPNLQNIPIRTPLGREIRACFVAEPGNVLISADYSQVELRVLAHIAG 675 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 ++ L F G+D+H ATAA + G+ E + + R AK +N+G++YG+SAFGLA +L I Sbjct: 676 EEVLKEIFRRGEDVHTATAAAILGIDPEQLDAGSRSKAKMVNYGIVYGLSAFGLADRLQI 735 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 PR+EAQ+++D Y + +P V ++ T QA +QGYV TL GRR +P++++ N R Sbjct: 736 PREEAQEFIDRYLDGFPAVQAFIRTTIEQATDQGYVTTLMGRRRQIPELRARNYQMRQLG 795 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 ER A+N +QGTAAD+IK AM+ D L A R R+I+Q+HDEL+FE ++ + Sbjct: 796 ERLAVNTVIQGTAADVIKLAMVNADRALHASGLRTRLILQIHDELLFEGPAEEAEQARDL 855 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWDQA 927 + M + LD PL+V+ G G NW A Sbjct: 856 VVPQMVDALELDPPLVVDAGIGPNWLDA 883 >UniRef50_A5CDT3 DNA polymerase I n=2 Tax=Orientia tsutsugamushi RepID=A5CDT3_ORITB Length = 910 Score = 848 bits (2192), Expect = 0.0, Method: Composition-based stats. Identities = 313/933 (33%), Positives = 495/933 (53%), Gaps = 57/933 (6%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60 M + L+DG +++RAY LT+ G P G +YG M+ ++I ++ P + V Sbjct: 22 MCSFKNKKIFLLDGYPFIFRAYFVNQDLTSHNGNPIGGVYGFATMIMNIISEFNPEYMVV 81 Query: 61 VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120 VFD FR +++ YKSHRP +P +L+ Q + +VK + + + + GVEADDVI + Sbjct: 82 VFDTGLDNFRHKIYPEYKSHRPELPSELKIQFPLVREIVKYLNINTIEMEGVEADDVIAS 141 Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL 180 LA + A ++I + DKD+ QLV + + + + + +E + K GV P + DFL Sbjct: 142 LANKFGNASDEIIIVSSDKDLLQLVNNKVYIYDPIKKQYIREKETIEKLGVRPSQVRDFL 201 Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240 +L GD SDNIPG+PG+G KTA LL+ L+ + IA + +E+++ Sbjct: 202 SLTGDVSDNIPGIPGIGPKTAIKLLEQFDSLNNILHNYANIA------SPRHRKLIEEHR 255 Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 ++A LS+QL +K D+ L L+ E L P AE++ L K+ F Sbjct: 256 QLAELSWQLVGLKQDLNLNLSVENLRWSPPNAEQIRTLIHKFGFTSLITK---------- 305 Query: 301 GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDS 360 A+K + ++ + + S + + I + E K +++ A E + Sbjct: 306 ----ASKLFKLELSHLIAKYPLSRASNISKIEITNPEIWLQVKNKAQESGYLAVLLEKEK 361 Query: 361 LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQI--SRERALELLKPLLEDEKALKVG 418 + + ++F+++ +I + ++ + + LL D K+ Sbjct: 362 NNY-----ISITFSLDLHKLYFIDLTAITSKEQNRAIATNPWWKSSIIELLLDSSIQKIT 416 Query: 419 QNLKYDRGILANY---GIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEE 475 NLK L N+ I D ML YIL++ ++ + + + ++ E Sbjct: 417 YNLKELLIFLLNFLRTEITSASCIDDIMLMHYILSAGKNDLSLNEIIQTY----NKSYSE 472 Query: 476 IAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVP 535 +Y+ + +L K+K L+ + I++P+ Sbjct: 473 --------------------QYSENKVCWLKNTFDNLMSELFKNK-LLHCYYEIDLPICY 511 Query: 536 VLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG 595 +L IE NG+KI+ +L S +L ++ LE++ ++I G+EFN++S KQL ILF+ Sbjct: 512 ILRNIENNGIKINVPLLKELSAQLKHKIELLEQQIYKICGQEFNIASPKQLGEILFDVLK 571 Query: 596 IKPLK-KTPGGAPSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTG 653 + K + ST EVLE L+ + ++L++R L KL +TY D LP IN T Sbjct: 572 LPHAKVSQKTKSYSTDSEVLENLSRAGIKIADLLLKWRQLTKLLTTYIDTLPTQINNNTF 631 Query: 654 RVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRI 713 R+HT+ Q T T RLSS PNLQNIP+R+E G ++R AF+AP+ I+SADYSQIELRI Sbjct: 632 RIHTTLLQTSTTTSRLSSHSPNLQNIPIRSEYGLKVRSAFVAPQGSKILSADYSQIELRI 691 Query: 714 MAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGL 773 +++ + + L F G+DIH +TAA++F + + VT E RR AKAINFG+IYG+SAFG+ Sbjct: 692 LSYFANIEQLKNVFIMGEDIHSSTAAQIFKINADQVTEEHRRKAKAINFGVIYGISAFGV 751 Query: 774 ARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNG 833 A+QLNI EA +Y++ YF+ YP + +YM+ T+ A E GYV+ + GRR Y+P I SSN Sbjct: 752 AKQLNISNTEAAQYINHYFQEYPSIRQYMDETKKFAVENGYVKNMIGRRCYIPLINSSNL 811 Query: 834 ARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDV 893 R A+RAAINAP+Q TA+DI K AMI + + ++ P +++++QVHDELVFE+ + V Sbjct: 812 TTRNFAQRAAINAPIQSTASDIAKIAMIQYEKLIYSKYPAIKLLLQVHDELVFELPNELV 871 Query: 894 DAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 D I MEN PL VE+ G+NW + Sbjct: 872 DTACNLIKCTMENIPYFSFPLKVELKIGDNWGE 904 >UniRef50_C6C0R6 DNA polymerase I n=3 Tax=Desulfovibrio RepID=C6C0R6_DESAD Length = 904 Score = 848 bits (2190), Expect = 0.0, Method: Composition-based stats. Identities = 317/932 (34%), Positives = 491/932 (52%), Gaps = 49/932 (5%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 +PL L+DGS++ YR +HA+P L S G PT AM+ VL L +I + KP + + D KG Sbjct: 12 DPLYLIDGSAFFYRGFHAYPDLKRSDGVPTNAMFFVLRTLLKVIKEEKPKYLVFILDGKG 71 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 K FR EL++ YK+ RPPMPDDLR+QIEPL + +G+PL+ G EADD I +LA Sbjct: 72 KNFRHELYDQYKAQRPPMPDDLRSQIEPLKEALNVIGVPLIVSEGEEADDCIASLAARY- 130 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINT--MTNTILGPEEVVNKYGVPPELIIDFLALMG 184 K+ RPV+I DKD+ Q + N+ + + I + + PE DF AL+G Sbjct: 131 KSERPVVILGADKDLKQCLDENVFMWDPAGKKEKITSLADFREDTKLEPEQWADFQALVG 190 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 DS+DNIPGVPGVG+ TA ++ L+ + +K+ + K++ E + Sbjct: 191 DSADNIPGVPGVGKVTATKIMAEYPTLEDIRDNYDKLK-------PAIQKKMKDELENIF 243 Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304 + +L ++ + +Q E++ + YEF+ DV++ + P Sbjct: 244 VYRELTRMRLGSCSDCDLKQCELRSVDGDRAAEFMTTYEFRSLVRDVKSLFSATSGSGVP 303 Query: 305 AAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFD-------TE 357 A ++++ + S + + AP + + Sbjct: 304 AGNSKKSASGQASLFGEEDTTSAAKPKKSASGGGQFSLFGEATPAPAAPENRLELKKISS 363 Query: 358 TDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKV 417 L + + VGL + G +I V D + +++ L+ V Sbjct: 364 ASELPDFTDKEVGL---VREGNIFFIGV--DGDELMCKVTAAELAAGLQ-----SAKTIV 413 Query: 418 GQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSL-AERWLKHKTITFEEI 476 ++K +G FD L +Y+LN + D L A + + Sbjct: 414 VADVKSFLRADDAWGQIQLFRWFDLSLAAYLLNPEERNYAWDRLRAMLFAGEELPDA--- 470 Query: 477 AGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPV 536 +++ + G A L L + P + K G + N+E+PL+PV Sbjct: 471 ---------VDEVHPDAQGMAA-------LALMHVLGPRI-KSAGLDELTANLEIPLIPV 513 Query: 537 LSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGI 596 L+ +E+ G+ ID + E+ R+ EL + HE AGE FN+ S++Q+ T+LF+ G+ Sbjct: 514 LADMEKAGITIDLDAFADFLTEVNERINELTRVIHERAGEPFNIRSSQQMATVLFDSLGL 573 Query: 597 KPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVH 656 KP KTP GA ST+ VLE+L+ + + ILEYR + KL+STY + LP ++N GR+H Sbjct: 574 KPGGKTPKGALSTANSVLEKLSGQHEIITDILEYRKMEKLRSTYLEPLPKLVNA-NGRIH 632 Query: 657 TSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAH 716 T+++Q TATGRLSS+ PNLQNIP+R ++G+R+R F A E + +ADYSQ+ELR++AH Sbjct: 633 TNFNQLATATGRLSSSGPNLQNIPIRGDQGKRMRACFTAGEGLRLAAADYSQVELRVLAH 692 Query: 717 LSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQ 776 S D L++AF +DIH TAA +F VTS++RR+AK INFGLIYGM L+R+ Sbjct: 693 FSGDPALVSAFEHDEDIHSRTAALLFDRDPADVTSDERRNAKTINFGLIYGMGPQKLSRE 752 Query: 777 LNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARR 836 L I EA++++ YFE+ + E+ + Q +E+GYV TL GRR LP++ S++ Sbjct: 753 LGIKINEAKEFIAKYFEKLDVLKEFYDSVVEQGREKGYVTTLSGRRRLLPELHSTSPQIL 812 Query: 837 AAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAV 896 + A R AIN +QG+AADIIK AMI V + + R+I+Q+HDEL+ E +++++ + Sbjct: 813 SQARRQAINTVIQGSAADIIKMAMIKVADNAEIKHLGGRLILQIHDELLVEGPEENIEEI 872 Query: 897 AKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 K + + M+ L VPL V++G G NW QAH Sbjct: 873 GKLLQKDMQTVATLAVPLKVDLGLGRNWAQAH 904 >UniRef50_D2VA69 DNA polymerase I n=1 Tax=Naegleria gruberi RepID=D2VA69_NAEGR Length = 1085 Score = 845 bits (2184), Expect = 0.0, Method: Composition-based stats. Identities = 340/995 (34%), Positives = 526/995 (52%), Gaps = 82/995 (8%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 + ++LVDG+ + RAY PPLT+S G PT A+ L +++ + H A+ FD+ Sbjct: 93 EKKILLVDGTPLVVRAYFGTPPLTSSNGTPTNAILTFAKSLIAILKSDEFDHVAIFFDSG 152 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 + R + YK++R P D+L+ Q + + MGL +++ G EADD+I T+AR+A Sbjct: 153 KPSIRKSISSDYKANRKPTEDNLKKQFPICKLLAEKMGLKVISKDGFEADDLIATVARQA 212 Query: 126 EKAGRP-VLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMG 184 + +++ + DKD+ L N+TL++ MT L ++++ KY +PP+LI +FLAL+G Sbjct: 213 KDEKFNSIVVVSSDKDLHCLSDTNLTLLDPMTKKKLTMDDIIGKYELPPKLIPEFLALVG 272 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 D++DNI GV G+G+K A +LL+ G + + + K ++ N + Sbjct: 273 DTADNIKGVKGIGKKKAVSLLEQYGSISEILNNLDD-----ENMEKKSREAIKSNIDDLK 327 Query: 245 LSYQLATIKTDVELELTCEQLEVQQP-----AAEELLGLFKKYEFKRWTADVEAGKWLQA 299 LS +L + +V L+ + + +V Q EEL+ + + E ++ + Sbjct: 328 LSLRLVALDEEVPLDYSLQDFQVDQSSLDFSQNEELIKMLEDLEINSVIKQLKKETDKKE 387 Query: 300 KGA----------KPAAKPQETSVADEAPEVTAT---------VISYDNYVTILDEETLK 340 K + +E S AD A + ++ Y IL+E+ L Sbjct: 388 KTTKSKSKKKEVIESVVLSEEMSSADVASLKLSHVSDDSKIGKIVKASEYNIILNEKELD 447 Query: 341 AWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAH----DYLDAPDQI 396 ++I +++ + F TE L + + G+SF I PG A Y+P ++LD+ + + Sbjct: 448 SFIEQVKISGNVCFSTEICLLSLHNPVMAGISFCISPGQAYYLPFFKGGKVEFLDSVNIL 507 Query: 397 SRERALELLK-PLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGR 455 L ++ ++E+ LK+G N+KY +LANYG+ ++ D M+ SY+LN Sbjct: 508 KESPILSKVRTEIMENPNILKIGHNIKYHIKMLANYGVTVKN-FDDIMVMSYVLNCGKHG 566 Query: 456 HDMDSLAERWL----KHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLK 511 H+MD + E L K I +E+ G GK ++T + + +A + AD+T Q + Sbjct: 567 HEMDEIVENVLLLDPKEHIIPEKEVLGIGKKKVTLMEADIVSVVHFACQHADLTKQAYDV 626 Query: 512 MWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAH 571 + L K +E IE PLV L+ IE GV +D L E ++ + K Sbjct: 627 LKSALDKSPKLTQFYEGIEKPLVETLAGIEMKGVFMDEPALVKMENEYREKIKAIGNKIR 686 Query: 572 EIAG--------------------------------EEFNLSSTKQLQTILFEKQG--IK 597 E AG EEFN++S +QL ++FEK G K Sbjct: 687 EDAGYPTIDEDIEIPTSEEEIESMIIEMDEMKQEASEEFNINSNRQLGQVIFEKLGIGTK 746 Query: 598 PLKKTPGGAPSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVH 656 KKT G + EVL++LA + + + K ILEYR L KL STY L INP T R+H Sbjct: 747 LRKKTKVGDYILNAEVLQKLAAEGHSIAKHILEYRALTKLYSTYISGLRQHINPYTKRIH 806 Query: 657 TSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFI-APEDYVIVSADYSQIELRIMA 715 T++ A+T TGRLSS PN+QNIPVR EG++IR+ FI +DYVI+ DYSQ+ELRI+A Sbjct: 807 TTFQNALTVTGRLSSVMPNIQNIPVRTAEGKQIRRCFISPSDDYVIMKVDYSQVELRILA 866 Query: 716 HLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLAR 775 H++ L AF E KD+H TA++VF +PL+ V R AKAINFG+IYGMS FGL++ Sbjct: 867 HIANIPVLKNAFKENKDVHAITASQVFNVPLDQVDKSTRNKAKAINFGIIYGMSEFGLSK 926 Query: 776 QLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSN-GA 834 ++ + + A+ +++ YF++YPG+ YM +T ++ GYV TL RR ++P I+ G Sbjct: 927 RIGVDTQAAKSFIEQYFKQYPGIKNYMTKTIEFCRKHGYVNTLFNRRCWIPGIEDQGFGG 986 Query: 835 RRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVD 894 + + ER +IN P+QGT+ADI K AM ++ Q + R RMI+QVHDE+VFEV KD+V+ Sbjct: 987 KSSFGERTSINTPIQGTSADITKIAMNSLHKAFQEKGLRTRMIIQVHDEIVFEVPKDEVE 1046 Query: 895 AVAKQIHQLMENCT-----RLDVPLLVEVGSGENW 924 V I +LME VPL VE W Sbjct: 1047 TVEPIIKELMEGAAFFGGTNFTVPLTVEATVDSKW 1081 >UniRef50_Q14QK7 DNA polymerase I n=1 Tax=Spiroplasma citri RepID=Q14QK7_SPICI Length = 869 Score = 845 bits (2184), Expect = 0.0, Method: Composition-based stats. Identities = 292/930 (31%), Positives = 464/930 (49%), Gaps = 74/930 (7%) Query: 7 NPLILVDGSSYLYRAYHAFPP----LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 ++L+DG+S L+RA++A L + G PT A+Y NML ++ V F Sbjct: 2 KKVLLIDGNSLLFRAFYATAYNGEMLKSLDGTPTNAVYAFTNMLNKILKANNYYSVVVAF 61 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 D K FR +L YK R P++L Q + + + +P L G EADD++G LA Sbjct: 62 DKGKKNFRHDLLVDYKDGRSKTPNELIVQFPIVKEFLDSYQIPYLEQEGYEADDLLGCLA 121 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNT---ILGPEEVVNKYGVPPELIIDF 179 AEK V I + DKD+ QL+T ++ ++ ++ K+G+ P + D Sbjct: 122 MLAEKEDFYVDIFSSDKDLYQLITNKTNILVPRQGDSADVIDEAALIAKWGIKPLQVPDL 181 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 LMGD SDN+ GVP VGEKTA L++ ++ LY E I G + L + Sbjct: 182 KGLMGDPSDNLKGVPKVGEKTAIKLIKEYHSIENLYDNIEHIKG-------ALQQNLLNH 234 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 KE A L ++ATI D+ LE P E L+ + KY + + + Sbjct: 235 KESALLCKKIATIFCDINLEHFT--FTSFSPNHETLMQFYLKYNMNSFVTKLFNNQDNDI 292 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 + + K E ++ T E Sbjct: 293 QNSNIKVKIIEEWRSEFNENNTT-------------------------------VYLELL 321 Query: 360 SLDNISANLVGLSFAIEPGVAA--YIPVAHDYLDAPDQISRERALELLKPLLEDEKALKV 417 + ++ ++G GV YI HD +L L D K K+ Sbjct: 322 DENYHTSEIIGFGIVNSKGVFYFDYIHAKHD--------------KLWHQFLNDNKYQKL 367 Query: 418 GQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIA 477 + K LA I ++ I +D ML Y+ NS A +D+ + K + +T E Sbjct: 368 TYHAKSLIVALARDNIFVQNIEYDMMLAGYVYNSNAKN-SLDTYINLFEKKQILTDEFFY 426 Query: 478 GKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVL 537 GKG + + + G + E A +L K+ +L K +++ NIE+P+ L Sbjct: 427 GKGVKKQIPADVI--KLGHFIGEKASYIHKLRPKII-ELLKTNQQYDLYHNIELPIAFAL 483 Query: 538 SRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIK 597 +R+E NGVK+D L + + + EL + ++IA +E N +S KQ+ +LF+ + Sbjct: 484 ARMEINGVKVDQYELTTQTLRIEKIVQELNNEINDIAQKEINPNSPKQISELLFQNFSLP 543 Query: 598 PLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHT 657 KK ST++E LEE+ ++ + IL+YR KL STY + I G+VHT Sbjct: 544 DRKKG-----STAQETLEEIKNNHVIIPKILDYRKYQKLYSTYLKGMEKYIFA-DGKVHT 597 Query: 658 SYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFI-APEDYVIVSADYSQIELRIMAH 716 Y Q +T TGRLSS +PN+QNI +R+ + +R+ F+ + D +++S DYSQIELRI+AH Sbjct: 598 IYKQTLTNTGRLSSVEPNMQNISIRDHIQKEVRKIFVVSSPDNILLSCDYSQIELRILAH 657 Query: 717 LSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQ 776 +S+D+ L+ AF +DIH TA ++F L + +T RRSAKA+NFG+IYG+S FGLA Sbjct: 658 MSKDQDLIAAFNNNEDIHTNTAMKIFNLSKDEITPNIRRSAKAVNFGIIYGISDFGLATD 717 Query: 777 LNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARR 836 LNI +A+ ++ Y++++P + ++++ K+ GYV T+ R+ Y+ +I N +R Sbjct: 718 LNISVAKAKAIINNYYQQFPTIKAFIDKQVEFCKQNGYVTTIFNRKRYVSEINDRNYMQR 777 Query: 837 AAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAV 896 +R A+N P+QG+AADIIK A+ +D + ++I Q+HDEL+FE+ + ++ V Sbjct: 778 EFGKRIAMNMPIQGSAADIIKIALKNIDQEFLKLNLKAKIIAQIHDELIFEIPQVELIQV 837 Query: 897 AKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 K + LME+ T+LDV L+V++ +G +W Sbjct: 838 QKIVKILMEDSTKLDVKLIVDMKTGLSWYD 867 >UniRef50_Q252Y8 DNA polymerase I n=14 Tax=Chlamydiaceae RepID=Q252Y8_CHLFF Length = 869 Score = 845 bits (2183), Expect = 0.0, Method: Composition-based stats. Identities = 319/927 (34%), Positives = 483/927 (52%), Gaps = 65/927 (7%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 + ++D S +++RAY A P + NS+G+ T A++G + + LI ++ P H VFD Sbjct: 2 RKIFILDASGFVFRAYFALPDMKNSSGKGTQAVFGFIRSINKLIKEFSPNHMVAVFDGPN 61 Query: 67 -KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 K R E++ YKS+R +DL QI + +GL L V GVEADDVI ++++ A Sbjct: 62 NKQSRREIYADYKSNREKKEEDLYQQIPVVKEYCNLLGLSHLEVEGVEADDVIASVSKLA 121 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTI-LGPEEVVNKYGVPPELIIDFLALMG 184 G V I T DKD+ QLV+PN+ +IN + + VVN YGVPP I D+LAL+G Sbjct: 122 IAEGYEVCICTADKDLLQLVSPNVVVINPWKDQPPIDENGVVNIYGVPPCRIPDYLALVG 181 Query: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244 D+SDNIPGV G G K A ALLQ ++ + +++ G + + K++ Sbjct: 182 DTSDNIPGVSGCGPKKAAALLQKYHSVEGILEHLDELTGST-------HKMFSEQKDILL 234 Query: 245 LSYQLATIKTDVELELTCEQL--EVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 LS LA + +V L + L + + EE+ + + FK VE Sbjct: 235 LSKDLAVLNNNVPLPTEIKDLEFPMHEIRQEEMNAFYMRQGFKTLVQQVEEA-------- 286 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 S I + E L + L F Sbjct: 287 -----------------------SNVYVEVINNSENLIEVLPTLHGKK-VPFSVGYKGSF 322 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 S +L+G++ A + V Y+ V + + + ++ LK + G N+K Sbjct: 323 LPSLSLMGVALACDDSV-YYVDVEN---------ATDDVIKPLKDFFGRKDTEFYGYNIK 372 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 D L N GI + IA D L +++N A LA ++ GK Sbjct: 373 RDSHALKNAGIHVNNIALDLALAEHLINGGAKISYQTLLA----DLGLVSSAGRYGKEWG 428 Query: 483 QLTFN-QIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 QL+ Q + +Y E + + +L K K ++F N+EMPL VL IE Sbjct: 429 QLSLPIQKSPPNPAQYFGEFVSHLPTIKETLLKEL-KSKNIEDIFFNMEMPLEKVLFTIE 487 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 RNG+ +D + L N + L+ LA L + +AG FN+ S KQL +L+ K G+ P+ K Sbjct: 488 RNGMPLDVEDLQNLEKILSEELAILADDIYALAGSPFNIKSPKQLAEVLYNKLGLTPVDK 547 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 A ST EVLE + ++ + + IL +R + KL STY LP ++P T R+H +++Q Sbjct: 548 ----ARSTKAEVLEAMTGEHDVIEKILAFRSVEKLLSTYVRALPKQVDPCTFRIHPTFNQ 603 Query: 662 AVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFI-APEDYVIVSADYSQIELRIMAHLSRD 720 T TGRL+ DPNLQNIP+R+E GR +R+AF ++ +SADYSQIELR +AHLS+D Sbjct: 604 MGTVTGRLACQDPNLQNIPIRSERGRLLRKAFCDTHQNTYFLSADYSQIELRFLAHLSQD 663 Query: 721 KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 + L AF +D+H TA++VF +PLE VT +QR AK +NFG+IYG A+GL++ L I Sbjct: 664 ESLKLAFESREDVHTFTASQVFHVPLEKVTKQQRMQAKTVNFGIIYGQQAYGLSKILKIS 723 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 EAQK +D YF+RYP V ++ T +QA E V+TL GR + + + RAA+ Sbjct: 724 VSEAQKLIDAYFDRYPDVARFINETVSQACENLRVKTLLGRERIIDNW-TEFSNSRAASG 782 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 R A+N +QG+AA++IK AM+ + L+ + R RM++Q+HDEL+FEV +++ + + + Sbjct: 783 RLAVNTRIQGSAAELIKLAMLQLSDALEKRKLRSRMLLQIHDELIFEVPEEEKEEMQTLV 842 Query: 901 HQLMENCTRLDVPLLVEVGSGENWDQA 927 +ME+ L VPL+V + G+NW + Sbjct: 843 RDIMESAMILSVPLVVNILIGKNWAEC 869 >UniRef50_C7H3Z2 DNA polymerase I n=2 Tax=Ruminococcaceae RepID=C7H3Z2_9FIRM Length = 859 Score = 844 bits (2181), Expect = 0.0, Method: Composition-based stats. Identities = 307/928 (33%), Positives = 464/928 (50%), Gaps = 84/928 (9%) Query: 8 PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 L+++DG+S RA++ LT G T A++G LN++ SL+ + +P AV FD K Sbjct: 9 RLLVIDGNSIANRAFYGIKLLTTKDGRYTNAIFGFLNIMNSLLRECEPDEVAVAFDLKHP 68 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 TFR E+++ YK R MPD+L Q+ L ++ +G ++ G EADD++GTLA E Sbjct: 69 TFRHEMYDGYKGTRHAMPDELAQQMPILKELLTDLGYRQVSAKGWEADDILGTLAAACEA 128 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINT------MTNTILGPEEVVNKYGVPPELIIDFLA 181 ++TGD+D QLV+ T++ + + + KYG+ P+ +I+ + Sbjct: 129 RRDDCFLATGDRDSLQLVSETTTVLLATSAMGRSKTETMDLDAIHEKYGIEPKQLIEVKS 188 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGD+SDNIPGV G+GEKTA L++ G LD++Y + S L +E Sbjct: 189 LMGDTSDNIPGVKGIGEKTAMTLVKNFGTLDSVYDHLD-----SPIIKPRQRENLLACRE 243 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 AYLS+ L TI+TD ++ +V + + L ++ E + G Sbjct: 244 DAYLSHTLGTIRTDAPIDTAEGAYKVTEGNKPAAVRLMQELEIQTLITRFG------LDG 297 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 P P D A S Y+ L A ++ +A +T Sbjct: 298 IVPELDPDTLPEVDAAIASLPAEPSGH-YLVAARPAVLGKKSAVVQPEAWYAV-QDTTVY 355 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 LV LL+D K + Sbjct: 356 PLSEEELV-------------------------------------SLLDDPKVTLDVFDS 378 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 G I +D L +Y+L++ A + + +LA + + EE Sbjct: 379 APLYARAMAAGSWGSSIVWDGKLAAYLLDASASHYLLTTLATSYHARSAFSCEEYP---- 434 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 DA L KM ++ ++ G +++ NIE PL VL+ + Sbjct: 435 -------------------DAGFLADLFAKMKAEITEN-GEDDLYNNIEFPLAQVLADMT 474 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGE-EFNLSSTKQLQTILFEKQGIKPLK 600 R G+ +D + + +L L ++ + AG +FN +S KQL T+LF+ G+ K Sbjct: 475 RTGILVDREGIEAFGVQLRQELDQVLTRIEMEAGTSDFNPNSPKQLGTLLFDTMGLPHGK 534 Query: 601 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 KT G ST E LE+L D PL + IL+YR KL STY + L +I + GR+HT ++ Sbjct: 535 KTKNG-WSTDAETLEKLR-DIPLVEDILQYRACQKLNSTYVEGLLKVI-GEDGRIHTRFN 591 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRD 720 Q TGRLSS +PNLQNIP+R E G ++R F+A V+V ADYSQIELRI+AH++ D Sbjct: 592 QTEARTGRLSSDNPNLQNIPIRTEMGSKLRAYFVAKPGCVLVDADYSQIELRILAHVTGD 651 Query: 721 KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 + AF G DIHR+TAA+++ + E VT R SAKAINFG++YG A+ L++ + + Sbjct: 652 AHMQEAFLSGADIHRSTAAKIYNIRPEDVTPRLRSSAKAINFGIMYGKGAYSLSKDIGVS 711 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 KEA+ ++ Y +P + YME+T A A++ GYV TL GRR LP++ S+N RA+ E Sbjct: 712 VKEAEAFLQTYLATFPNIDGYMEKTIADARQCGYVSTLFGRRRALPELNSNNHNIRASGE 771 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 R A N P+QGTAAD+IK AM+ V L+ E+ R+I+ VHDEL+ E + + + A+ + Sbjct: 772 RMARNTPIQGTAADVIKLAMVRVWRRLRNEKMESRLILTVHDELIVEAPEAEAEKAAQIL 831 Query: 901 HQLMENCTRLDVPLLVEVGSGENWDQAH 928 + ME C VPL +V +G+NW +AH Sbjct: 832 REEMEGCVHYAVPLSTDVHTGKNWLEAH 859 >UniRef50_C4FFL7 Putative uncharacterized protein n=2 Tax=Bifidobacterium RepID=C4FFL7_9BIFI Length = 982 Score = 841 bits (2174), Expect = 0.0, Method: Composition-based stats. Identities = 317/993 (31%), Positives = 480/993 (48%), Gaps = 80/993 (8%) Query: 1 MVQIPQNPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHA 58 + + L++VDG S +RA+ A P + S+G+ T A++G ML +I KP H Sbjct: 5 VSDETRGTLLVVDGHSLAFRAFFALPVENFSTSSGQATNAVWGFATMLAQVIDAEKPDHL 64 Query: 59 AVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVI 118 AV FD KG TFR+ + YK R P+DL +Q+ + +M+ A+G+ + G E DDVI Sbjct: 65 AVAFDVKGGTFRNTMLPQYKGTRDAAPEDLLSQLPLIQSMLDALGVTYIEKPGYEGDDVI 124 Query: 119 GTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPE 174 GTLA E+A L+ +GD+D QLV +T++ + + PE V KY V P Sbjct: 125 GTLATMGEQAKYKTLVLSGDRDAFQLVDDWVTVLYPGHHFKDLKHMTPEAVFAKYKVTPA 184 Query: 175 LIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAA 234 D AL G+++DNIPGVPGVG+ A + G L+ + ++I G Sbjct: 185 QYPDLAALRGETADNIPGVPGVGDGFAAKWINQYGSLEGICEHADEIGG-------KKGE 237 Query: 235 KLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAG 294 L +N + L+ ++ + D++L +T + L A ++ LF EF T Sbjct: 238 SLRENLDQVKLNRKVNALVRDIDLGVTVDDLTFGHFDAAKIDELFTSLEFGSRTK----T 293 Query: 295 KWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAF 354 + L+ A K ++ + A+ E +A +S Y D +TL AW+ P + Sbjct: 294 RILKTFNGGEAPKLEQNAKAEAGKERSAIEVSDVQYAG--DADTLNAWVEHNLPKPDASG 351 Query: 355 DTETDSLD-----------NISANLVGLSFAIEPGV---------------------AAY 382 + D D ++ S+ I Sbjct: 352 ASVNDESDDTGTQFTIDHSMQCNGIIERSWVINAAGNAKPGKVKANAITLQYGGSALIIE 411 Query: 383 IPVAHDYLDAPDQISRERALELLKP----------------LLEDEKALKVGQNLKYDRG 426 IP D Q A +L V K Sbjct: 412 IPAVDSADDTGKQTDAATADATDAATDAPRLDPGMRDALNVILAQYAPTLVVHGYKEQLH 471 Query: 427 ILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTF 486 + A+ G++L FDT L Y++ ++ A R+L E A +G L Sbjct: 472 LFASLGVDLPKPLFDTKLAGYLVQPDFHADTLEQAAARFLDIHVEEKTEEATQGLLDLDD 531 Query: 487 NQIALEEAGRY--AAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNG 544 A + + + A + +L + P + + + + + +E+P+ VL +E G Sbjct: 532 GADADADGNQTSTLLQHAAIIAELARALAPQIDQ-REQFGLLQRMELPVSHVLYGMESQG 590 Query: 545 VKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPG 604 K+D + L + + + ++ A + AG NL S KQL +LFE G+KP K+T Sbjct: 591 AKVDMQRLTSMRDTFAADARQAQEIAWDYAGTTVNLQSPKQLGKVLFEDMGLKPTKRTKT 650 Query: 605 GAPSTSEEVLEELALDYP-------LPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHT 657 G +T+ + L++L Y +L +R KLK L NP R+HT Sbjct: 651 GGYTTNADALQKLYFTYADDERASGFLGALLRHRETNKLKQI-VATLIDATNPADERIHT 709 Query: 658 SYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYV-IVSADYSQIELRIMAH 716 ++ Q V ATGRLSS DPNLQNIP RN GR IR AF+ E + ++S DYSQ+ELRIMAH Sbjct: 710 TFEQTVAATGRLSSVDPNLQNIPNRNAAGREIRSAFVPGEGFESLMSCDYSQVELRIMAH 769 Query: 717 LSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQ 776 LS D+ L+ AF G D H+ A+ V G+P++ +T +QR KA+++GL YG+S++GLA+Q Sbjct: 770 LSGDESLIEAFKSGADFHKYVASLVHGVPVDQITPDQRSHVKAMSYGLAYGLSSYGLAQQ 829 Query: 777 LNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARR 836 L I EA+ YF + V +++E ++A+++GY ET+ GRR Y P +KS+N A R Sbjct: 830 LKIRPSEAEALKAKYFATFGKVHDFLESCVSEARKRGYTETMFGRRRYFPALKSTNRAAR 889 Query: 837 AAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAV 896 AAERAA+NAP+QG+AADI+K AMI L + R+I+Q+HDELV E+ + + V Sbjct: 890 DAAERAALNAPIQGSAADIMKIAMIRARRALAEAGMKSRIILQIHDELVVEIAPGEREQV 949 Query: 897 AKQIHQLMENCTRLDVPLLVEVGSGENW-DQAH 928 + + MEN LDVPL V G G +W AH Sbjct: 950 SALVRDAMENAVHLDVPLDVSTGVGADWQLAAH 982 >UniRef50_B8IZN9 DNA polymerase I n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8IZN9_DESDA Length = 921 Score = 838 bits (2164), Expect = 0.0, Method: Composition-based stats. Identities = 310/951 (32%), Positives = 476/951 (50%), Gaps = 60/951 (6%) Query: 2 VQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 + + P+ L+DGS+++YR + A + S G PT A+ V +L ++ + +P + V Sbjct: 7 LDLATEPVFLMDGSAFIYRGFFANRNMQRSDGFPTNALVVVTRVLLRILREERPQYFLFV 66 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 D KGK FR ++F YK++R P+DL Q++P+ MV A+G+ L EADD I +L Sbjct: 67 KDGKGKNFRHDIFPLYKANRDATPEDLVRQMQPIERMVTALGMNLEVSDHCEADDCIASL 126 Query: 122 AREAEKAGRPVLISTGDKDMAQLVTPNITLINT--MTNTILGPEEVVNKYGVPPELIIDF 179 A + RPV+I GDKD+ Q + PN+ + + +L + + G+ P D Sbjct: 127 AARFSQE-RPVVIVGGDKDLKQCLGPNVYMWDPAFRDEKLLTAAQFTEESGLTPAQWPDV 185 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 AL+GD+SDNIPGVPG+G KTA + + L+ + + KL + Sbjct: 186 QALVGDTSDNIPGVPGIGPKTAAKIFEICPSLEDIRDH-------FALLPPKIQDKLRDH 238 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ- 298 + + +L T+ DV + + L V+ A L +++E ++ + + +Q Sbjct: 239 LDEMFTWRKLTTLSLDVCTAVEMDDLLVRPINAARCADLAEEFELHALRREMASLERMQL 298 Query: 299 -AKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFD-- 355 A A E + P ++A+ + + A L A Sbjct: 299 SAPADSERAGKDERFRGESLPLLSASAEAGSDAKKTGGGPARGAAAQPLPPKGAGAQMSL 358 Query: 356 TETDSLDNI----------SANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELL 405 E ++ G A A + + + ++ LL Sbjct: 359 LEVVEEKPAPQVSRVEDLPDCRGRNVALVWARGFDAAPHAAVEGGEDVCWTGGQESMSLL 418 Query: 406 KPLLEDEKALKVGQNLKYDRGILANY----GIELRGIAFDTMLESYILNSVAGRHDMDSL 461 E V +LK A + + + D L +Y++N + L Sbjct: 419 CAW-AAEARRIVTPDLKGLLSQAACWRSLTQEKKQDFFMDLGLAAYLVNPEESDYAWPRL 477 Query: 462 AERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKG 521 A W ++ G A + L++ + +++ G Sbjct: 478 AVHWG---APLRDDGPG----------------------PALLALRMVEVLEARMRQ-DG 511 Query: 522 PLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLS 581 ++E++E+PL P+L+ +ER G+ ID + ++ RL L +E AG EFN+ Sbjct: 512 LAELYESLELPLTPILADMERRGIAIDAAAFESFLSDVQGRLDTLTAAVYEAAGREFNIR 571 Query: 582 STKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYT 641 S +QL +LF + +KT GG STS++ LE+LA +P+ +LE+R L K++STY Sbjct: 572 SAQQLGDVLFSTLELPSPRKTKGGQASTSQDTLEKLAGRHPVVDSVLEFRKLEKMRSTYL 631 Query: 642 DKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVI 701 D LP +++ GR+HT+++Q TATGRLSS++PNLQNIPVR + G+R+R FIA + Sbjct: 632 DPLPRLMDG-NGRIHTTFNQKATATGRLSSSNPNLQNIPVRGDLGKRMRTCFIANPGSAL 690 Query: 702 VSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAIN 761 VSADYSQ+ELR++AH+S+DK LL AF G+DIH TAA V+ L + V+ +QRR+AK IN Sbjct: 691 VSADYSQVELRVLAHMSQDKALLEAFRNGEDIHARTAALVYDLAPDQVSPDQRRNAKTIN 750 Query: 762 FGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGR 821 FGLIYGM A L + L I EA++++ YF R G+ E+ + A AK QGYV TL GR Sbjct: 751 FGLIYGMGAQKLGQDLKISTSEAKEFIARYFSRLTGLKEFYDSVEATAKRQGYVTTLGGR 810 Query: 822 RLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVH 881 R LPDI S NG A A R AIN +QG+AADIIK AM+AV Q + R+++QVH Sbjct: 811 RRLLPDIHSPNGQAYALARRQAINTVIQGSAADIIKLAMLAVAEDEQLREHEARLLLQVH 870 Query: 882 DELVFEVHKDDVDAVAKQIHQLMENCT----RLDVPLLVEVGSGENWDQAH 928 DEL+ EV + A ++ LM + L VPL+V+ G G+NW AH Sbjct: 871 DELLLEVPEASARAAGARVADLMSSVKPGGEPLSVPLVVDWGVGKNWGAAH 921 >UniRef50_Q30VQ3 DNA polymerase I n=7 Tax=Desulfovibrionales RepID=Q30VQ3_DESDG Length = 931 Score = 836 bits (2161), Expect = 0.0, Method: Composition-based stats. Identities = 300/931 (32%), Positives = 460/931 (49%), Gaps = 80/931 (8%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + + P+ L+DGS++++R ++AF + S G PT A++ VL +L L+ + +P +AA D Sbjct: 75 LDKEPVYLIDGSAFIFRGFYAFQNMQRSDGLPTNALFIVLRILLKLLREEQPAYAAFFMD 134 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 KG TFR L++ YK++R P+ L Q++P+ V+++G+PL G EADD I +LA Sbjct: 135 GKGPTFRHALYDQYKANRSATPEPLVQQLDPIRRGVRSLGIPLEVSDGCEADDCIASLAA 194 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINT--MTNTILGPEEVVNKYGVPPELIIDFLA 181 + K+ RPV+I DKD+ Q + N+ L + +L + G+ P DF A Sbjct: 195 KF-KSERPVIIVGADKDLKQCIDDNVYLWDPGAKQEKLLDLAGFTEETGLSPSQWPDFQA 253 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 ++GDSSDNIPGVPGVG KTA + L+ + + + + K + Sbjct: 254 VIGDSSDNIPGVPGVGPKTAAQIFAEFPTLEAIQENEKALK-------PGVQKKFAGQWD 306 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 YL +L T+ T L + + VQ A+ +++E + ++ ++ Sbjct: 307 NIYLYRRLTTLDTGRCTSLALKDMTVQSVDADNAAAFLREFELRTLLRELPQSVPVRPAR 366 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 + AA Q + + S A + T +L Sbjct: 367 SGAAAMQQASLFGEPQAAPQIPSFS---------------------SADQLPAVSGTVAL 405 Query: 362 DNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNL 421 G++ A Y D Q + ++ Sbjct: 406 VPAEK---GIAVAFNGNEYLYTGKPEDLAAHMAQTGAIS--------------RIIAPDV 448 Query: 422 KYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGK 481 K ++ FD L +Y+LN + SLA R Sbjct: 449 KALYRSHTSWRAIEVHRWFDLGLAAYLLNPEERDYSWTSLARR----------------A 492 Query: 482 NQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 + + A+DA L + G + E +EMPL+PVL+ +E Sbjct: 493 EEFGIDAQTPATLALTLAQDAAARL-----------EGVGLSALMEELEMPLIPVLADME 541 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 G++I+ E+ L L ++ + +AG +FN+ S++QL +LF G+K K Sbjct: 542 LRGIRINRAEFSGFLAEVQKELDRLTQEVYAVAGGQFNIRSSQQLGELLFGTLGLKAGSK 601 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 T GG STS+ VLE+LA +P+ ILEYR L KL+STY + LP + R+HT+++Q Sbjct: 602 TKGGQASTSQAVLEKLAGKHPVIDTILEYRKLEKLRSTYLEPLPRLAQEND-RIHTTFNQ 660 Query: 662 AVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDK 721 TATGRLSS+ PNLQNIPVR G+R+R+ F A +V+ADYSQIELR++AH+S D Sbjct: 661 LATATGRLSSSQPNLQNIPVRGPMGQRMRRCFTAAPGNKLVAADYSQIELRVLAHVSADP 720 Query: 722 GLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPR 781 L+ +F +DIH TA ++ + VT +QRR+AK INFGLIYGM LA++L + Sbjct: 721 TLIESFTRNEDIHSRTAGLLYDVTAADVTPDQRRNAKTINFGLIYGMGPQKLAQELKVTL 780 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 EA+++++ YF + + E+ + A+E G+V TL GRR LP+I S N R+ A R Sbjct: 781 NEAKEFIERYFSKLSHLKEFYDNVEQSAREHGFVTTLAGRRRLLPEIHSDNNQLRSQARR 840 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 AIN +QG+AADIIK AM+ A +Q +I+QVHDEL+ E +D +A AK++ Sbjct: 841 QAINTVVQGSAADIIKIAMLKAAADETLQQLNAALILQVHDELLLEAPQDAAEAAAKRLA 900 Query: 902 QLMENC----TRLDVPLLVEVGSGENWDQAH 928 +M + LDVPL V+ G G+NW QAH Sbjct: 901 DIMSSVRPGGAALDVPLAVDYGIGDNWGQAH 931 >UniRef50_P52027 DNA polymerase I n=4 Tax=Deinococci RepID=DPO1_DEIRA Length = 956 Score = 836 bits (2161), Expect = 0.0, Method: Composition-based stats. Identities = 335/960 (34%), Positives = 482/960 (50%), Gaps = 82/960 (8%) Query: 3 QIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 + L+L+DG + +R+Y A PPL NS GE T A+ G + +L L Q K VVF Sbjct: 43 PSKPDTLVLIDGHALAFRSYFALPPLNNSKGEMTHAIVGFMKLLLRLARQ-KSNQVIVVF 101 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 D KTFR E +E YKS R P+DL QI + A+V A+G P L G EADDVI +L Sbjct: 102 DPPVKTFRHEQYEGYKSGRAQTPEDLPGQINRIRALVDALGFPRLEEPGYEADDVIASLT 161 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLAL 182 R AE G V I T D+D QL+ ++ +I +++GP +V KYGV +D+ AL Sbjct: 162 RMAEGKGYEVRIVTSDRDAYQLLDEHVKVI-ANDFSLIGPAQVEEKYGVTVRQWVDYRAL 220 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 GD+SDNIPG G+G KTA LLQ G L+ +Y KL ++E Sbjct: 221 TGDASDNIPGAKGIGPKTAAKLLQEYGTLEKVYEAAH----AGTLKPDGTRKKLLDSEEN 276 Query: 243 AYLSYQLATIKTDVELELTC--EQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300 S+ L+ + TD+ L++ +L E+LL + + + + + Sbjct: 277 VKFSHDLSCMVTDLPLDIEFGVRRLPDNPLVTEDLLTELELHSLRPMILGLNGPEQDGHA 336 Query: 301 GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDS 360 + + ++ L W E A + D Sbjct: 337 PDDLLEREHAQTPEEDEAAALPAF----------SAPELAEWQTPAEGAVWGYVLSREDD 386 Query: 361 LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLL--EDEKALKVG 418 L + P +AP+ + L KPL E + K Sbjct: 387 LTAALLAAATFEDGVARPAPVSEPDEWAQAEAPENL-FGELLPSDKPLTKKEQKALEKAQ 445 Query: 419 QNLKYDRGILANY--------------------------GIELRGIA----FDTMLESYI 448 ++ + R L + +RG D +L +Y+ Sbjct: 446 KDAEKARAKLREQFPATVDEAEFVGQRTVTAAAAKALAAHLSVRGTVVEPGDDPLLYAYL 505 Query: 449 LNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQL 508 L+ +M +A+R+L + A A +T L Sbjct: 506 LDPANT--NMPVVAKRYLDREWPAD------------------------APTRAAITGHL 539 Query: 509 HLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEK 568 ++ P L + +++ +E PL VL R+E GV++D L S + +RLA+LE Sbjct: 540 LRELPPLLDDAR--RKMYDEMEKPLSGVLGRMEVRGVQVDSDFLQTLSIQAGVRLADLES 597 Query: 569 KAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTP-GGAPSTSEEVLEELALDYPLPKVI 627 + HE AGEEF++ S KQL+T+L++K + KKT G ST+ LE L +P+ ++ Sbjct: 598 QIHEYAGEEFHIRSPKQLETVLYDKLELASSKKTKLTGQRSTAVSALEPLRDAHPIIPLV 657 Query: 628 LEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGR 687 LE+R L KL+ TY D +P ++NP TGR+HT++ Q ATGRLSS +PNLQNIP+R+E GR Sbjct: 658 LEFRELDKLRGTYLDPIPNLVNPHTGRLHTTFAQTAVATGRLSSLNPNLQNIPIRSELGR 717 Query: 688 RIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLE 747 IR+ FIA + + +++ADYSQIELR++AH++ D + AF EG DIHR TAA+V GL Sbjct: 718 EIRKGFIAEDGFTLIAADYSQIELRLLAHIADDPLMQQAFVEGADIHRRTAAQVLGLDEA 777 Query: 748 TVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRA 807 TV + QRR+AK +NFG++YGMSA L+ L IP EA ++++YF YPG+ Y+ T Sbjct: 778 TVDANQRRAAKTVNFGVLYGMSAHRLSNDLGIPYAEAATFIEIYFATYPGIRRYINHTLD 837 Query: 808 QAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWL 867 + GYVETL GRR Y+P + S N +R A ER A N P+QGTAADI+K AM+ +D L Sbjct: 838 FGRTHGYVETLYGRRRYVPGLSSRNRVQREAEERLAYNMPIQGTAADIMKLAMVQLDPQL 897 Query: 868 QAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 A RM++QVHDEL+ E D + VA ++MEN +L VPL VEVG+G NW Sbjct: 898 DA--IGARMLLQVHDELLIEAPLDKAEQVAALTKKVMENVVQLKVPLAVEVGTGPNWFDT 955 >UniRef50_Q2GI23 DNA polymerase I n=6 Tax=Rickettsiales RepID=Q2GI23_EHRCR Length = 944 Score = 834 bits (2154), Expect = 0.0, Method: Composition-based stats. Identities = 330/976 (33%), Positives = 492/976 (50%), Gaps = 100/976 (10%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 ++D L+RAY+A P L S G P G +YG +N+ I ++ + VVFD K Sbjct: 4 FTIIDAYGLLFRAYYALPNLRTSYGLPIGGVYGFINIFLKYIEKHVTDYLVVVFDTGSKN 63 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK- 127 FR ++ YK +RP +PDDL Q L V A + V G EADDVI TL+++ K Sbjct: 64 FRHNIYPEYKGNRPKLPDDLIPQFSLLREAVNAFNIASEEVVGYEADDVIATLSKKYCKL 123 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSS 187 G V + T DKD+ QL+ NI + + + N + E+V +K+G+ ++DFL+L GD+S Sbjct: 124 QGVKVTVVTSDKDLLQLLKYNICIFDPIKNKYIEEEDVQSKFGISSNQLLDFLSLTGDAS 183 Query: 188 DNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSY 247 DN+PG+PG+G KTA LL G LD L ++ + Q + A LS Sbjct: 184 DNVPGIPGIGVKTAAKLLNDFGSLDNLLLHVHEVKTN------KCRESITQYSDQAILSR 237 Query: 248 QLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAK 307 QL T+ +V++ E+ Q +EL+ KKYE + V+ + + Sbjct: 238 QLVTLCDEVDICGDIEKYSFQISGIQELVEFLKKYELQSLMNKVDKFFKVGNASSAVNQN 297 Query: 308 PQETSVADEAP-----EVTATVISYDNYVTILDEE----------------------TLK 340 + E +++ D + + + L+ Sbjct: 298 TSSSDKTMGGDKVIHHEPQSSMNEVDKFFKVGNASSAVNQNASSSDKTMGGDKVIHHELQ 357 Query: 341 AWIAKLEK----------------------APVFAFDTETDSLDNISAN-----LVGLSF 373 + + K++K T+SL N ++ Sbjct: 358 SSMNKVDKFFEVGNTSSTVNQNASSSDKTMGGSEVIHYSTESLKVFLENCKGEGIMAFYM 417 Query: 374 AIEPGVAAYIPVAH--DYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANY 431 + V + +++ D L D+ ALEL+KP+L LKV ++K ++ + Sbjct: 418 EMADNVIDSVSLSYKDDILLYIDKDHVTDALELIKPVLGLNYVLKVIYDVKTLLKVIPDV 477 Query: 432 GIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIAL 491 I D M+ SYIL+ H + + +K + + Sbjct: 478 EIV---AFDDIMIMSYILSPSVHDHSLQEIINYNVKQDVVNVK----------------- 517 Query: 492 EEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKV 551 +TL L K+ ++E +E PL+ VL +E+ G+ ID + Sbjct: 518 ----------TAITLLLLHKLLKKNLFVNQLYTIYERVEKPLIRVLDSMEKVGMLIDIDI 567 Query: 552 LHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSE 611 L S + +++ LE + + +AG EFN++S+KQL T+LF+K GIK KK G+ ST Sbjct: 568 LKTLSSTFSEKVSVLENEIYRLAGTEFNIASSKQLGTVLFDKMGIKKSKKLSSGSYSTDA 627 Query: 612 EVLEELA-LDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLS 670 EVL +L + + IL++R KLKSTYTD L IN +GR+HT Y TATGRLS Sbjct: 628 EVLNDLVFNEIEIADKILQWRHFTKLKSTYTDALGKQINSNSGRIHTFYSMISTATGRLS 687 Query: 671 STDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEG 730 S++PNLQNIP+R+EEG IR+AF+A + Y +VSADYSQIELRIMAH++ + AF Sbjct: 688 SSNPNLQNIPIRSEEGNAIRRAFVARKGYKLVSADYSQIELRIMAHIAGVQAFKDAFFLD 747 Query: 731 KDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDL 790 +DIH TA ++F +++ RR AK+INFG+IYGMSAFGLA+QL I R EA Y+D Sbjct: 748 QDIHSITAEQIFC--TQSLDKNLRRKAKSINFGIIYGMSAFGLAKQLGISRSEANAYIDN 805 Query: 791 YFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQG 850 YF+ YP + YM + AK GY T+ GR+ ++ DI SSN A R +ERAAINAP+QG Sbjct: 806 YFKSYPEIQSYMNNIKIYAKTYGYTRTIFGRKCFIRDINSSNAAARNFSERAAINAPLQG 865 Query: 851 TAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRL 910 T+ADIIK +MI + + +I+QVHDEL+FE+ ++ VD + I ++ME +L Sbjct: 866 TSADIIKMSMIHLFDKIT----HGSLILQVHDELLFEILEEYVDYAVEVITKVMEGIVKL 921 Query: 911 DVPLLVEVGSGENWDQ 926 VPL V++ G NW Sbjct: 922 SVPLKVDIRIGTNWAD 937 >UniRef50_A5TW64 DNA-directed DNA polymerase I n=10 Tax=Fusobacterium RepID=A5TW64_FUSNP Length = 914 Score = 833 bits (2153), Expect = 0.0, Method: Composition-based stats. Identities = 326/943 (34%), Positives = 511/943 (54%), Gaps = 53/943 (5%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 +L+D S+ +YRAY A EPTGA+YG +N L S+I ++KP + A FD K Sbjct: 2 KKAVLLDVSAIMYRAYFANMNFRTKN-EPTGAVYGFINTLLSIINEFKPDYMAAAFDVKR 60 Query: 67 KT-FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 + R E++ YKS+R P+DL QI + ++ A + + G EADDV+G+LA++ Sbjct: 61 SSLKRTEIYSDYKSNRQSAPEDLITQIPRIEEVLDAFNINRYKIEGYEADDVLGSLAKKL 120 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTN-------TILGPEEVVNKYGVPPELIID 178 K V+I TGDKD++QLV NIT+ T+ ++VVN GV PE I D Sbjct: 121 AKQDIEVIIVTGDKDLSQLVEKNITVALLGKGAEGEKFGTLKNSDDVVNYLGVVPEKIPD 180 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 L+GD SD IPGV +GEK A A+ L+ +Y + + + G ++ L Sbjct: 181 LFGLIGDKSDGIPGVTKIGEKKALAIFSQYDSLEKIYENIDNLKSIDGIG-PSLIKNLIN 239 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 K++A++S +LA I T++++++ L+ E L L K EFK + + + Q Sbjct: 240 EKDIAFMSRELAKIFTNLDIDVEESGLQYG-MDRERLYSLCKALEFKMFIKKLGLEEKPQ 298 Query: 299 AKGAKPAAKPQETSVADEAPEVTATV-----------ISYDNYVTILDEETLKAWIAKLE 347 + E + + E T ++ + I E +L L Sbjct: 299 NPTLFSSENVGEKKDSTKVVEETINEEIEFTKEVNLSLTNRQVLIIDSESSLNEQKEYLA 358 Query: 348 KAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKP 407 A +I +G+ + E Y P+ H L +++ L+ Sbjct: 359 NYKKIA---------SIYYESLGIIISTEDKD-FYFPLNHGGL-----LAKNIDKNLVVN 403 Query: 408 LLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLK 467 + + N K L N GI + + D M+ ++++S + ++ E + K Sbjct: 404 FISQLDIKFISYNFK----ALLNLGISFKSMYMDMMIAYHLISSQTKIDPIIAITE-YSK 458 Query: 468 HKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFE 527 + F+ GK + I ++ +Y ++ + L ++ ++ L+K V Sbjct: 459 LEPKDFKATFGK----VNVELITTQDFSKYLSDISIGILAIYDELNYLLKKED-LYKVLM 513 Query: 528 NIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQ 587 EMPL+PVLS +ER G++ID + N+S EL L +EK +E AGEEFN++S KQL Sbjct: 514 ENEMPLIPVLSLMERKGIEIDVQYFKNYSVELDKELLRIEKAIYEEAGEEFNINSPKQLG 573 Query: 588 TILFEKQGIKPLKKTPGGAPSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPL 646 ILF K + KKT G ST VLE+L Y + +++L+YR L KLK+TY D LPL Sbjct: 574 DILFVKMNLPSGKKTKTG-YSTDVMVLEDLESYGYNIARLLLDYRKLNKLKTTYVDTLPL 632 Query: 647 MINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADY 706 +++ + R+HTS++Q TATGRLSS+DPNLQNIPV+ ++G +IR+ FIA E V++S DY Sbjct: 633 LVD-ENSRIHTSFNQIGTATGRLSSSDPNLQNIPVKTDDGIKIREGFIAGEGKVLMSIDY 691 Query: 707 SQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGL-PLETVTSEQRRSAKAINFGLI 765 SQ+ELR++ +S+D+ L+ A+ E KD+H TA +F L ETV+ EQR AK INF +I Sbjct: 692 SQVELRVLTSMSKDENLIEAYREEKDLHDLTARRIFNLADSETVSREQRTIAKIINFSII 751 Query: 766 YGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYL 825 YG + FGLA++L IP K+A +Y+ YFE+YP V + + +E GYV+TL GR+ Y+ Sbjct: 752 YGKTPFGLAKELKIPVKDASEYIKKYFEQYPRVTTFEKEVIEFGEEHGYVKTLFGRKRYI 811 Query: 826 PDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELV 885 I S N ++ AER A+N +QGTAA+++K+ M+ V L+ ++ + +++QVHDEL+ Sbjct: 812 SGIDSKNKTIKSQAERMAVNTVIQGTAAEVLKKVMVKVYDVLKDKE-DIALLLQVHDELI 870 Query: 886 FEVHKDDVDAVAKQIHQLMENCTRL-DVPLLVEVGSGENWDQA 927 FEV K V+ ++ + +M+N +L DV L + + G+NW +A Sbjct: 871 FEVEKSSVEKYSEILADIMKNTVQLEDVKLNININIGKNWAEA 913 >UniRef50_C2BWF0 DNA-directed DNA polymerase n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BWF0_9ACTO Length = 932 Score = 832 bits (2149), Expect = 0.0, Method: Composition-based stats. Identities = 311/951 (32%), Positives = 485/951 (50%), Gaps = 45/951 (4%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPP--LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 + + L+++DG S +RA+ + P S G T A++G +ML ++I KPTH Sbjct: 1 MSKKRLLVLDGHSLAFRAFFSRDPEHFRTSTGVYTNAVHGFFSMLLTMIRAEKPTHIGAA 60 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 FD +FR +++ YK R P + Q+E + M+ AMG+ L VEADD++ TL Sbjct: 61 FDLSRHSFRTDIYPDYKGGRAETPPEFIGQVENIQKMLSAMGIKWLTEPNVEADDILATL 120 Query: 122 AREAEKAGRPVLISTGDKDMAQLVTPNITLINTMT----NTILGPEEVVNKYGVPPELII 177 A + K+G VL+S+GD+D QL++ ++T++ + P+ V ++Y V P+ Sbjct: 121 ATKGTKSGMEVLVSSGDRDSFQLISDDVTVLYPGRSISETKRMTPQAVKDRYDVWPQQYP 180 Query: 178 DFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLE 237 + AL+G+ +DN+PGVP VGEK A + + G LD+L +++ G L Sbjct: 181 EIAALVGEHADNLPGVPLVGEKVAASWINEYGSLDSLLEHRDELKG-------KRGENLR 233 Query: 238 QNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTAD-VEAGKW 296 Q+ + + QL ++TD++L L+ E L + + + + EFK+ + G+ Sbjct: 234 QHIDDVLRNRQLNRLRTDLQLPLSLEDLHWTGFDPQAIQEICDELEFKQMRTQILRLGQA 293 Query: 297 LQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDT 356 + E PE D Y + + + + + A F+ Sbjct: 294 FGVTSINGDSATMELDRTQTEPEP----QDADGYGVVPEPQRFR--LGSDFTATQFSDWL 347 Query: 357 ETDSLDNISANLVG-LSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDE--- 412 + ++ VG + ++ D I + + LL D Sbjct: 348 QNTQSSSLGIWAVGNIGVTNPRIDWLFLAAERDCQGQCVLIVPDELTPQTEHLLCDALAG 407 Query: 413 KALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTIT 472 K + K R L +G EL G D + Y++N R + +R L + Sbjct: 408 DRKKTVYDAKSLRHALHAHGWELHGAVTDIKMLDYLVNPDGNRTKFAGVTKRLLGWEIDE 467 Query: 473 FEEIAGKGKNQLTFNQIALEEAGRYAAED-----------ADVTLQLHLKMWPDLQKHKG 521 K Q+T + + +E G +A+ A LQ+ + H Sbjct: 468 KPSDISKISEQMTLD-LGVELDGNSSAQPWPQTLINQAIYAYALLQMQPTLEQ--LAHFR 524 Query: 522 PLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLS 581 ++ +E PL +L ++E G+ ID L +++ L +A ++ A + G E NLS Sbjct: 525 QVDGLLELENPLSYILEKMEYTGIGIDTIYLDEYAQSLQSEVAMAQQSAFDSIGREVNLS 584 Query: 582 STKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALD--YPLPKVILEYRGLAKLKST 639 S KQLQ +LF + + P K +T + LEELA +P + +L +R KL Sbjct: 585 SPKQLQEVLFTQLEL-PKTKKTKTGYTTDAKALEELARYNPHPFLEALLYHRDRIKLLQI 643 Query: 640 YTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY 699 + GR+HT++ Q V ATGRLSS DPNLQNIP R +G++IR+AF+ + Y Sbjct: 644 VRN--LRERVADDGRIHTTFGQTVAATGRLSSIDPNLQNIPARTVDGQKIREAFVPQKPY 701 Query: 700 V-IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAK 758 +++ADYSQIE+RIMAHLS D+GLL AFA G+D+HR+ AA V+G+ + VT QR K Sbjct: 702 AALMTADYSQIEMRIMAHLSGDEGLLAAFASGEDLHRSVAALVYGVQPDEVTPTQRSHVK 761 Query: 759 AINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETL 818 A ++GL YG+SA+GLA QLNI +++A++ MD YFER+ V EY+ + A A GY ET+ Sbjct: 762 ATSYGLAYGLSAYGLAAQLNISQRDAKQLMDTYFERFGKVREYLNQIVATATRVGYTETM 821 Query: 819 DGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIM 878 GRR YLP+++S+N A RAA+NAP+QG+AAD++K AM+ VDA L+ EQ + R+++ Sbjct: 822 RGRRRYLPELRSTNRNVADNARRAALNAPIQGSAADLMKAAMLQVDADLRQEQLQSRVLL 881 Query: 879 QVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENW-DQAH 928 QVHDELV EV + + + + Q M +L VPL V VG G NW AH Sbjct: 882 QVHDELVLEVAPGETERLETLVRQAMTGVAKLRVPLEVSVGIGPNWRAAAH 932 >UniRef50_UPI0001BC5C75 DNA polymerase I n=3 Tax=Fusobacterium RepID=UPI0001BC5C75 Length = 894 Score = 827 bits (2137), Expect = 0.0, Method: Composition-based stats. Identities = 331/925 (35%), Positives = 487/925 (52%), Gaps = 37/925 (4%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 +L+D S+ +YRAY+A + PTGA+YG L L L+ +Y+ + A FD K Sbjct: 2 KRALLLDVSAMMYRAYYANMNMRTKE-MPTGAVYGFLLSLFQLLKEYESEYMAAAFDIKR 60 Query: 67 -KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 R EL+ YKS+R P+DL QI + A++ A G+ + + G EADD++G+L+ + Sbjct: 61 SHLKRTELYAEYKSNRDTTPEDLVKQIPYIEAILDAFGIQRIKIDGYEADDILGSLSTKL 120 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185 K G PV I TGDKD++QL+ N + + E+V N V PE I D L+GD Sbjct: 121 SKKGIPVTIVTGDKDISQLLDENTEIYLLGKEVLKTREDVKNYIDVYPEKIPDLFGLIGD 180 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 SSD IPGV +G K A +L+ G L+ +Y +K++ L G KT+ ++++KE+A+L Sbjct: 181 SSDCIPGVRKIGPKKAVPMLEKYGNLEGIYENIDKLSELPGVG-KTLIQIMKEDKELAFL 239 Query: 246 SYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPA 305 S LA I+ +++ + E+L+ + E L +F+K EFK + + + + + K Sbjct: 240 SRSLAKIERNLDFPFSLEELQF-EKKEEALREIFQKLEFKSFLKRLGSEETKEEKSLLQG 298 Query: 306 AKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNIS 365 + A+ T I E LK + + + + Sbjct: 299 NLFSASPRAE-KESRTEVKEKNLEKKIIKSFEELKKEMEDFSEEDKILLLYDRLGIT--- 354 Query: 366 ANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDR 425 Y+P H+ L + LE K K +LK Sbjct: 355 --------CTFSQKNLYLPFFHEGL-----LGNNLDLEECKQFFSTLKGKIYTYHLKE-- 399 Query: 426 GILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLT 485 L G +D M+ Y L S + D + + +LK + + K K Sbjct: 400 --LYKLGFSFSKPVYDMMIA-YHLVSSQTKEDYTLIGQYYLKKIAEDEKTVFAKQK---- 452 Query: 486 FNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGV 545 ++ E G + A V + D+ K K V E+PL+PVL+ +ER G+ Sbjct: 453 LESLSAEVYGDFLLNRAGVLYSCLDILEEDV-KEKELEAVLWETELPLIPVLADMERIGI 511 Query: 546 KIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGG 605 KID K +S ELT +LA LEK E AGEEFNL+S KQL ILF K + KKT G Sbjct: 512 KIDRKYFEAYSLELTEKLALLEKAIWEEAGEEFNLNSPKQLGEILFLKLNLPTGKKTKTG 571 Query: 606 APSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVT 664 ST EVLE L+ + + +LEYR LAKLK+TY D +P M R+HT YHQ T Sbjct: 572 -FSTDVEVLEHLSSQGFQIASNLLEYRKLAKLKNTYVDPIPKMTGEGD-RIHTCYHQIGT 629 Query: 665 ATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLL 724 TGRLSS+DPNLQNIPV+ EEG RIRQ FIA E + ++S DYSQ+ELR++A LS+D+ LL Sbjct: 630 VTGRLSSSDPNLQNIPVKTEEGIRIRQGFIAREGWKLLSIDYSQVELRVLASLSKDENLL 689 Query: 725 TAFAEGKDIHRATAAEVFGLPL-ETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKE 783 A+ E +D+H TA +F L E V+ EQR AK INF +IYG + FGLA++L I K+ Sbjct: 690 KAYQEKQDLHSVTAKRIFELQEDEEVSREQRIMAKIINFSIIYGKTPFGLAKELGISVKD 749 Query: 784 AQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAA 843 A +Y+ YF +YP V ++ + A+E GYVET GRR + I S N ++ AER A Sbjct: 750 AGEYIKRYFAQYPRVAQFERQVITFAEEHGYVETYFGRRRIIDGIHSKNKMVKSQAERMA 809 Query: 844 INAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQL 903 +N +QGTAA+I+K+ MI + +WL +++ + +++QVHDEL+FE+ + + + + + Sbjct: 810 VNTVVQGTAAEILKKVMIKIYSWL-SQKTDIHLLLQVHDELIFEIQEGKLQEYEENLIRF 868 Query: 904 MENCTRL-DVPLLVEVGSGENWDQA 927 M +L +V L V G+ W +A Sbjct: 869 MRETIQLEEVELEVNTNIGDTWAEA 893 >UniRef50_C3WHF0 DNA polymerase I n=3 Tax=Fusobacterium RepID=C3WHF0_9FUSO Length = 916 Score = 824 bits (2130), Expect = 0.0, Method: Composition-based stats. Identities = 325/936 (34%), Positives = 500/936 (53%), Gaps = 37/936 (3%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 +L+D S+ +YRAY A EPTGA+YG +N L S+I ++ P + A FD K Sbjct: 2 KRAVLLDVSAIMYRAYFANMNFRTKN-EPTGAVYGFINTLLSIIKEFNPDYMAAAFDVKR 60 Query: 67 KT-FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 + R E+F YKS+R P+DL AQI + ++ A + + EADDV+G++A++ Sbjct: 61 SSLKRTEIFGDYKSNRQSTPEDLVAQIPRIEEVLDAFNINRYRIESYEADDVLGSIAKKI 120 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNT-------ILGPEEVVNKYGVPPELIID 178 K V+I TGDKD++QLV NIT+ T + E+VVN GV PE I D Sbjct: 121 AKDDLEVIIVTGDKDLSQLVEKNITIALLGKGTEGEKFGMLRTAEDVVNYLGVVPEKIPD 180 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 L+GD SD IPGV +GEK A A+ L+ +Y + + + G ++ L Sbjct: 181 LFGLIGDKSDGIPGVTKIGEKKALAIFSKYDSLEKIYENIDDLKNIEGIG-PSLIKNLTN 239 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 K++A+LS +LA I T++++ L E L+ E+L L K EFK + + + Q Sbjct: 240 EKDIAFLSRELAKIFTNLDINLEEENLKYS-MDKEKLYELCKTLEFKMFIKKLNLEEKTQ 298 Query: 299 AKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTET 358 E E T V Y L+ + ++ + E Sbjct: 299 TSNFDHKPVLLSLFDKVEEVEKTEKVEKEIVYEKELNINFSNRELVIIDNETLLNEQKEY 358 Query: 359 ----DSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKA 414 + +I +G+ + E Y P+ H L +S+ L + + Sbjct: 359 LNNYKKIASIYYEELGIILSTEEKD-LYFPLNHGGL-----LSKNIDKNTLIKFIAELDV 412 Query: 415 LKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFE 474 + N K L N G + + D M+ +++ S + D+ + F+ Sbjct: 413 KFISYNFK----TLLNLGFTFKSMYMDMMIAYHLI-SSQTKMDVFIPITEYSNVDAKDFK 467 Query: 475 EIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLV 534 GK + + E Y ++ L ++ ++ L K + ++ EMPL+ Sbjct: 468 TTFGKA----HIETLLVGEFAGYLSKIGLGILAIYDEINHILHKEE-LYDILIQNEMPLI 522 Query: 535 PVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQ 594 PVLS +ER G+KID N+S EL LA++EK +E AGEEFN++S KQL ILF K Sbjct: 523 PVLSLMERKGIKIDVSYFKNYSLELEKELAKIEKAIYEEAGEEFNINSPKQLGDILFVKM 582 Query: 595 GIKPLKKTPGGAPSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTG 653 + KKT G ST VLE+L Y + +++L+YR L KLK+TY D LP +++ Sbjct: 583 NLPSGKKTKTG-YSTDVMVLEDLESYGYNIARLLLDYRKLNKLKTTYVDTLPNLVD-SNS 640 Query: 654 RVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRI 713 R+HTS++Q TATGRLSS++PNLQNIPV+ ++G +IR+ F+A E V++S DYSQ+ELR+ Sbjct: 641 RIHTSFNQIGTATGRLSSSEPNLQNIPVKTDDGIKIREGFVAGEGKVLMSIDYSQVELRV 700 Query: 714 MAHLSRDKGLLTAFAEGKDIHRATAAEVFGL-PLETVTSEQRRSAKAINFGLIYGMSAFG 772 + +S+D+ L+ A+ E KD+H TA +F L + VT EQR AK INF +IYG +AFG Sbjct: 701 LTSMSKDENLIEAYREEKDLHDLTARRIFNLSDSDDVTREQRTIAKIINFSIIYGKTAFG 760 Query: 773 LARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSN 832 LA++L IP K+A +Y+ YFE+YP V + + +E GYV+TL GR+ Y+ I S N Sbjct: 761 LAKELKIPVKDASEYIKKYFEQYPRVTTFEKEVIEFGEEHGYVKTLFGRKRYISGIDSKN 820 Query: 833 GARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDD 892 +A AER A+N +QGTAA+++K+ M+ V L+ + + +++QVHDEL+FEV + Sbjct: 821 KTIKAQAERMAVNTVIQGTAAEVLKKVMLKVYETLKDKD-DIALLLQVHDELIFEVEESS 879 Query: 893 VDAVAKQIHQLMENCTRL-DVPLLVEVGSGENWDQA 927 V+ ++ + +M+N +L DV L + + G+NW +A Sbjct: 880 VEKYSEILADIMKNTVKLEDVNLNININIGKNWAEA 915 >UniRef50_D1AJI6 DNA polymerase I n=2 Tax=Fusobacteriaceae RepID=D1AJI6_SEBTE Length = 885 Score = 824 bits (2129), Expect = 0.0, Method: Composition-based stats. Identities = 331/931 (35%), Positives = 491/931 (52%), Gaps = 60/931 (6%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 +++D S+ +YR + A + NS G+ TGA YG +N L +I ++ P + D K Sbjct: 2 PKAVILDTSAIMYRTHFALMGMRNSKGKATGATYGFINTLNLIIKEFSPDYLVACLDVKR 61 Query: 67 KT-FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 R YK+HR MP++L QI + ++ A +P V G EADDVI TLA++ Sbjct: 62 SELKRTSELTEYKAHREDMPEELVYQIPKIMEVLDAYNIPKYKVDGYEADDVIATLAKKF 121 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNT-------ILGPEEVVNKYGVPPELIID 178 V I TGDKD+ QL+ NI + I ++VV GV P+ +ID Sbjct: 122 SDDNNEVFIVTGDKDLMQLIKDNINIALLGKGDGKSQFKYIQTEQDVVEYLGVRPDQVID 181 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 LMGD SD IPG+ G+G KT L+ G L+TLY E+I G KLE Sbjct: 182 LFGLMGDKSDGIPGIQGIGPKTGVELISKYGNLETLYENIEEIKG-------KRKEKLEN 234 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 KE A+LS +LAT+ D+++E E+L+ ++ ++L+ L+K+ EFKR+ D E K + Sbjct: 235 EKENAFLSRELATVHMDLDVEYNKEKLKYEEKNMDKLIPLYKEMEFKRFLEDAERAKKIA 294 Query: 299 AKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTET 358 + E + Y I E + I K+ V FD E Sbjct: 295 NPLQGTLFQTAVQEKIPAVKEEKK--ETPFQYEIIETLEKAEE-ITKIIGDEVTVFDNE- 350 Query: 359 DSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVG 418 L F I Y A D D + + +D+ Sbjct: 351 ------------LGFGISNKEKNYYIPAAIISDKADFLKK----------FKDKNVN--A 386 Query: 419 QNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAG 478 N+K L G+E + FD ML Y+L + A D++S+ + +E Sbjct: 387 YNIKE----LFKSGLEYKD-YFDIMLVWYVLGTEA-AQDLESIIFSEFQVLLEKYEVEF- 439 Query: 479 KGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLS 538 + ++++ E + + + +L + L+ G NV+ENIE LVPVL+ Sbjct: 440 ---KKQNMDEVSPERKAEFLTKRSYYMTRLKEILGHRLEAE-GLNNVYENIEKKLVPVLA 495 Query: 539 RIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKP 598 +E+ G+ IDP + EL LAE+EK + +AGEEFN++S KQL ILFEK + P Sbjct: 496 DMEKKGILIDPDYFGKYGNELKNNLAEIEKNIYGLAGEEFNINSPKQLSEILFEKMMLDP 555 Query: 599 LKKTPGGAPSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHT 657 +KKT G ST EVLE LA + + ILEYRG KL +TY + LP + + + R+HT Sbjct: 556 VKKTKTG-YSTDVEVLEVLAAQGVEVAEKILEYRGYTKLLTTYVEPLPKLADSEN-RIHT 613 Query: 658 SYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHL 717 ++HQ TATGRLSS++PN+QNIPV+ +EG +IR+ F++ E + +S DYSQIELR++A L Sbjct: 614 TFHQNGTATGRLSSSNPNIQNIPVKTDEGIKIRRGFVSEEGWSFISFDYSQIELRVLAEL 673 Query: 718 SRDKGLLTAFAEGKDIHRATAAEVFGL-PLETVTSEQRRSAKAINFGLIYGMSAFGLARQ 776 S D+ L+ A+ + KD+H TA ++F E V+ E+R AK INF ++YG + FGL+++ Sbjct: 674 SEDETLILAYQKDKDLHDLTARKLFFKTDEEPVSREERSIAKVINFSILYGKTPFGLSKE 733 Query: 777 LNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARR 836 L IP +A+ Y++ YFE YP V ++ +AK G+VETL G R Y+ I SSN Sbjct: 734 LKIPMGDAKLYINKYFEEYPRVRTFLNSVLQEAKLNGFVETLYGTRRYITGINSSNKNIE 793 Query: 837 AAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAV 896 A A+R A+N +QGTAA+IIK M+ + + ++ + M++QVHDEL+FEV + VD Sbjct: 794 AQADRMAVNTVVQGTAANIIKIVMVKLYEEFKDKE-DINMLLQVHDELIFEVKNESVDKY 852 Query: 897 AKQIHQLMENCTRL-DVPLLVEVGSGENWDQ 926 K+I +MEN +L +V L G+NW + Sbjct: 853 LKEIDNIMENTIKLKNVRLAANGNVGKNWGE 883 >UniRef50_B2GGW1 DNA polymerase I n=1 Tax=Kocuria rhizophila DC2201 RepID=B2GGW1_KOCRD Length = 960 Score = 813 bits (2101), Expect = 0.0, Method: Composition-based stats. Identities = 307/960 (31%), Positives = 473/960 (49%), Gaps = 71/960 (7%) Query: 2 VQIPQNPLILVDGSSYLYRAYHAF---------PPLTNSAGEPTGAMYGVLNMLRSLIMQ 52 V P+ L+L+DG S +RA+ A P S G T +YG +N + L+ + Sbjct: 36 VSRPEKRLLLIDGHSLAFRAFFALSRAAEYGNGPGFVTSEGVHTEGVYGFVNTMVKLVRE 95 Query: 53 YKPTHAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGV 112 KPTH V FD +G T R + + YK R P++ Q+ + +++A+G+P++ + G Sbjct: 96 EKPTHLVVSFDLEGPTLRSQEYGEYKGGRDETPEEFHGQVPNIQRVLEALGVPIVTMEGH 155 Query: 113 EADDVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNK 168 EADDV+ TLA A VL+ +GD+D Q++T ++T++ + V K Sbjct: 156 EADDVLATLASRAAAEDFEVLVFSGDRDAFQMITDHVTVVYPGRTPSDLRRMDAAAVYEK 215 Query: 169 YGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRG 228 Y V P+ D AL G+++DN+PGVPGVG A + G +D+L +I G Sbjct: 216 YKVAPQNYPDLAALTGETADNLPGVPGVGPGFAAKWITAYGPVDSLLEHAGQITG----- 270 Query: 229 AKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWT 288 L +N+E+ + +L + TD+ LE+ + + AE + +F + EF Sbjct: 271 --KKGEALRENEELVRRNRKLNRLVTDLPLEIDLSATALPKAHAERVAEVFDELEF---- 324 Query: 289 ADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIA-KLE 347 G++ + E A + + A + + + W+ + + Sbjct: 325 ------------GSQLRGRLLEAFAAQTSGDDVAALAPVTDVTRVHTAPEFADWLEAQDQ 372 Query: 348 KAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKP 407 APV D + L G A + + + ++ Sbjct: 373 DAPVVVRRLSADPKAPSGEEVTALVLTGTTGAALDLV-----------AADQELTRAVEQ 421 Query: 408 LLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLK 467 L D A KV LK L GI L G+ D L Y++ ++++S + L+ Sbjct: 422 WLGDTTAAKVVDGLKDLYHGLIQRGIVLAGVVDDVQLSGYLVRPALRSYELESQLAQHLE 481 Query: 468 HKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDA---------DVTLQLHLKMWPDLQK 518 + EE G +E DA +L + L + Sbjct: 482 VEVPAAEESTGGADAHGQTALALEDEDALGGVSDAVLVREATLGRACRELSEHLRA-LLE 540 Query: 519 HKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEF 578 G L + +EMPL +L+R+E G+ +D + E+L + + ++A E Sbjct: 541 ADGQLGLLTELEMPLAVILARMEATGIAMDRPGIDVLFEDLQHPIDQAFEQAQAQIDHEV 600 Query: 579 NLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYP------LPKVILEYRG 632 NL STKQLQ ++F++ G+ KKT G + + V + + P ++ +R Sbjct: 601 NLGSTKQLQAVMFDELGLPKTKKTKTGYTTDASAVADLIGKVSPDTAGSRFLVALMNWRE 660 Query: 633 LAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQA 692 +KLK + GR+HT+Y Q V ATGRLSST PNLQNIPVR E+G+RIR Sbjct: 661 YSKLKQ--IVAGLRDAIAEDGRIHTTYQQTVAATGRLSSTGPNLQNIPVRTEQGQRIRDV 718 Query: 693 FIAPED-----YVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLE 747 F+ ED +++ADYSQIE+RIMAHLS D+GL+ AF G+D+HR + VF + E Sbjct: 719 FVVGEDTQGPFECLMTADYSQIEMRIMAHLSGDEGLIEAFRGGEDLHRFVGSRVFDVAPE 778 Query: 748 TVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRA 807 VT + R KA+++GL+YG+S++GL++QL+I EA+ M YFER+ GV +++ Sbjct: 779 DVTPQMRSKVKAMSYGLVYGLSSYGLSQQLHIGVDEARTMMSGYFERFGGVRDFLRGVVE 838 Query: 808 QAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWL 867 +A+ +GY ET+DGRR YLPD+ S N R AAER A+NAP+QG+AADIIK+AMI VD L Sbjct: 839 EARSKGYTETIDGRRRYLPDLTSDNRQARQAAERMALNAPIQGSAADIIKKAMIGVDRAL 898 Query: 868 QAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 + Q R R+++QVHDEL+ EV + + V + + M L VPL V VG+G W QA Sbjct: 899 RDGQLRSRVLLQVHDELIVEVAPGEREEVERILRTEMAGAAELTVPLDVNVGTGRTWHQA 958 >UniRef50_B2KCD2 DNA polymerase I n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KCD2_ELUMP Length = 862 Score = 813 bits (2100), Expect = 0.0, Method: Composition-based stats. Identities = 322/927 (34%), Positives = 493/927 (53%), Gaps = 75/927 (8%) Query: 3 QIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 + + + D ++L+R YHA P L+ S G GA+YG + L L+ + KP + AV F Sbjct: 2 SADKKTIYIADAHNFLHRNYHALPKLSTSQGLEVGALYGFVRWLVKLVEEKKPHYVAVCF 61 Query: 63 DA-KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 D+ G T R ++F YK+HR P+ + L Q++ +V MGL + AV G+EADD+IG + Sbjct: 62 DSRGGSTKRKKMFSDYKAHRKPVDEALLTQLQLAREVVSGMGLKVFAVQGIEADDIIGFI 121 Query: 122 AREAEKAGRPVLISTGDKDMAQLVTPNITLINTM--TNTILGPEEVVNKYGVPPELIIDF 179 A+++ G +++T DKD QL+ +I L ++ GP+ V K+ + + + D+ Sbjct: 122 AKKSVAEGADAVLATSDKDALQLLNEHIKLWPAGAAKESLKGPDYVKEKFNIAQKYLTDY 181 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 LA++GDSSDN+PGV G+G KTA L+ G L+ + ++ + + K A K+ N Sbjct: 182 LAIVGDSSDNVPGVAGLGPKTAAELINNFGYLEDI---IKEAKAGNPKIKKGAAQKIIDN 238 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 + VA LS QL T+ ++ ++ T E PA +L LF KYEFK + ++ + Sbjct: 239 EAVAILSKQLVTLDENIPMDFTLEDAVFSPPAPAKLSELFAKYEFKNLLSAFDSARPKNT 298 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 + ++ E EV + K +I E + + D++T Sbjct: 299 PEGELFSQDTEIKQGISFNEVVNKIKD-------------KMFIQTDENFVLISADSQTC 345 Query: 360 SLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQ 419 L + D +++E L+ ++ L +++ LK+ Sbjct: 346 CL-----------------------------EELDNLTQEELLK-IEELANNKQILKISY 375 Query: 420 NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 ++K+ L E+ FD L +Y LN A +LA ++L +E Sbjct: 376 DVKFTLRALDVTPKEIIN-CFDVRLAAYSLNPGA-DIGFKALAAQYLDVIIEPKDE---- 429 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 + L + DL K K +F +E+PL+ VL Sbjct: 430 ---------------KEFLTLQNQYIWSLKEVLERDL-KEKDQFKIFNELELPLITVLLA 473 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 +E GV +D L N S+ L +A ++ ++ A E N++S KQL +LF++ + + Sbjct: 474 MEEIGVLVDKAWLENFSKTLEGEIAAIQNDINKDAQREINVNSPKQLGALLFDQLKLPSV 533 Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 KKT G ST EEVL++L +P+ K ILEYR AKLKSTY D L ++ + RVHT Sbjct: 534 KKTKTG-YSTDEEVLQQLVNLHPIVKKILEYRSNAKLKSTYVDNLIMLADG-NSRVHTYL 591 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSR 719 Q T TGRLSS+ PNLQNIP+R +GR +R+AF+A ++S DYSQI+LR++AH S+ Sbjct: 592 DQTGTVTGRLSSSSPNLQNIPIRTPKGRMLRRAFVAEGGKTLLSVDYSQIDLRLLAHESQ 651 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 D L+ AF EG DIH TAAEVFG+ E V+ E R SAKAINFG+IYG GL++ LNI Sbjct: 652 DSVLVNAFKEGGDIHTKTAAEVFGVMREMVSDEMRSSAKAINFGIIYGQGPMGLSQNLNI 711 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 +EA++Y+D YF Y GV E++++ A A+E+GYV+TL G YLP+ K +G + A Sbjct: 712 SVREAKEYIDNYFAVYKGVREWIDKNIALARERGYVKTLLGHIRYLPEFKMGSGHMASFA 771 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 +RAAIN +QG +AD+IK+AM + + V+M++QVHDEL+FE+ + ++ A Sbjct: 772 QRAAINTIVQGGSADVIKKAMADIFNHYK--GTEVKMLLQVHDELIFELPEKNLLKEAAV 829 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWDQ 926 I ME+ L VPLL E +G NW + Sbjct: 830 IKNKMEHTIELKVPLLAEAKTGVNWYE 856 >UniRef50_C7GZ50 DNA polymerase I n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZ50_9FIRM Length = 918 Score = 812 bits (2098), Expect = 0.0, Method: Composition-based stats. Identities = 317/961 (32%), Positives = 480/961 (49%), Gaps = 82/961 (8%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + I++DG+S +RAY+A ++ G T A+YG L+ML I + P + AV FD Sbjct: 1 MHSKRAIIIDGNSLFFRAYYAIKANMSADGMATNAIYGFLSMLYKSINDFSPDYIAVAFD 60 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 GKTFR E F+ YK++R D+L QI + ++ AM + +L E DD+IG+ AR Sbjct: 61 LGGKTFRHEKFDDYKANRRKTDDELLMQIPVIKEILAAMNIKILQKKAFEGDDIIGSFAR 120 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPELIIDF 179 E V+I +GDKDM QL++ N + T I ++ ++Y P+ ID+ Sbjct: 121 FVESDDVEVIIISGDKDMFQLISDNTKIAYTKRGISNIDIYDIQKFEDEYNFAPKHFIDY 180 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 A+MGDSSDN GV G+G+K A+ L+ ++ +Y ++I+G LE + Sbjct: 181 KAIMGDSSDNYKGVKGIGDKGARNLVTKYQTIENIYQNIDEISG-------KTKLALENS 233 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 K A++ +LATI +++L LT + +++ P + L ++K Y+ + +E + Sbjct: 234 KMQAFMGKELATIIVNLDLGLTLDDVKLVDPDFDTLASIYKNYKLNTFLKKLETNGCVNG 293 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 + + I + + A L+KA V D Sbjct: 294 TNDDETDELKGMLS-------------------IDVSRDVGSLEATLKKADVADLCLIND 334 Query: 360 SLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQ 419 S + AAY V + D R L ++ +EK VG Sbjct: 335 SNHIDKPEIY----------AAYFNVDGNIWLLDDMAQIHRVL----DIVAEEKVKVVGY 380 Query: 420 NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 +LK L G+ L FD ML ++N+ D + E L ++ + + K Sbjct: 381 DLKNALFALLQNGLPLFTPFFDVMLAYEVINNKGKYMDFYKILEDQLGID-VSDKLLKAK 439 Query: 480 GKNQLTFNQI---------------------------ALEEAGRYAAEDADV-------T 505 K LT + I + +E R EDA + Sbjct: 440 RKKTLTADDIKERYANICKSLKKTNNDVVNAALGDVESSDENARIGHEDALLYLLETVNI 499 Query: 506 LQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAE 565 +++ K+ +++ VF IEMPLV V++ +E GV +D + L + EL+ AE Sbjct: 500 FKVYDKLKSQIEEDD-LQKVFYEIEMPLVEVIASMENTGVWLDTEFLKTYEAELSNIEAE 558 Query: 566 LEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPK 625 L K +E+AG EFN++S KQL +LFEK ++P KT G ST+ EVL++L +P+ Sbjct: 559 LLDKIYELAGFEFNVNSPKQLGEVLFEKLNLEPKVKTKRG-YSTNAEVLQKLRKTHPIID 617 Query: 626 VILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEE 685 +ILE+R ++KL STY G+V + Q +TGR++ +P LQ IPV+ + Sbjct: 618 LILEFRKVSKLNSTYVRGFMGF-KGTDGKVRPEFLQIGASTGRMACINPALQTIPVKTDM 676 Query: 686 GRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLP 745 G+RIR+AF A +D V VSADYSQIELRI+ H+S D+GL+ AF G+DIH A A V G Sbjct: 677 GKRIRKAFKAGKDRVFVSADYSQIELRILGHVSCDEGLINAFKSGEDIHEAVAVNVLGAQ 736 Query: 746 LETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERT 805 V+ R AKAINFG+IYGMS FGL+ +L I RK+A+KY+D YF ++ V EYME Sbjct: 737 KGAVSKAVRSKAKAINFGVIYGMSDFGLSNELEISRKDAKKYIDEYFAKHRAVYEYMEAQ 796 Query: 806 RAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDA 865 ++ AK+ G V T GR +P+I + N R ER A+N+P+QG ADI+K AM V Sbjct: 797 KSIAKQTGAVRTETGRIRKIPEINAQNIMVRNLGERLAMNSPIQGMGADIMKLAMNNVYR 856 Query: 866 WLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWD 925 +Q + ++++Q+HDELV + D + V K + ME L L+ SGEN Sbjct: 857 AIQKQGLDAKIVLQIHDELVIDASVSDGEKVKKLLKDEMEAAYNLKTGLIANPQSGENLY 916 Query: 926 Q 926 Sbjct: 917 D 917 >UniRef50_A3EQ00 DNA polymerase I n=3 Tax=Leptospirillum RepID=A3EQ00_9BACT Length = 872 Score = 811 bits (2095), Expect = 0.0, Method: Composition-based stats. Identities = 302/939 (32%), Positives = 475/939 (50%), Gaps = 101/939 (10%) Query: 3 QIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 +P + L+L+DG Y++RAYH+ AG PT A+ NML S++ + P+ AVVF Sbjct: 20 DLPPSTLVLMDGFGYIFRAYHSRVTFVTRAGLPTDAITVFGNMLLSVLKELSPSAMAVVF 79 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 +++ R E+ K++RP P D QI + +++ +G+PLL+ G EADD I LA Sbjct: 80 ESRTGNVRSEILPEIKANRPEPPSDFLQQIPYIERLIRGIGVPLLSTDGYEADDTIAALA 139 Query: 123 REAEKAGR------PVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELI 176 + V++ + DKD+ LV+ + + + MT +LGP +V K+GV P I Sbjct: 140 LKWLNHHDRTNVPCHVVVLSSDKDLLTLVSERVWVYDPMTKKVLGPSDVREKWGVEPWQI 199 Query: 177 IDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKL 236 D LAL GD++DNIPGVPG+G+KTA LL G +DTLY + + + + + A L Sbjct: 200 PDLLALTGDTADNIPGVPGIGQKTAAKLLGNQGTIDTLYEDLDNV------VPERIRALL 253 Query: 237 EQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKW 296 +++E + + ++ + +D+ L L E L + P + L L ++ E + V Sbjct: 254 REHRERVFRNKKVTVLHSDLALSLEPESLSLSPPDMDSLKSLLQELEAPGLLSRVHRTLE 313 Query: 297 LQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDT 356 L+ + S P + + ++ P D Sbjct: 314 LREPSLAREEGKRRQSSEGRLP--------------------FQGDLPQMSGCPGAGIDL 353 Query: 357 ETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALK 416 DS + D + S E L+ + ++ KA+ Sbjct: 354 VDDSGFWVHDG--------------------DQANFYPFSSEEEVLKRMSAWRDEGKAVW 393 Query: 417 VGQNLKYDRGILAN-------YGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHK 469 +D+ L GI FD + +Y+L + +++LA R+ Sbjct: 394 C-----FDQTRLYRKCPRFFALGIPF---VFDATIAAYLLEPGHRDYLLENLAARYFLTD 445 Query: 470 TITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENI 529 T + ++L + + +G L + ++I Sbjct: 446 TSDRPRLVRNVLSKLWEDAV-----------------------------KEGLLELVQSI 476 Query: 530 EMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTI 589 E+PL +L ++E G++ID + L + E + ELE++ + +AG F + S KQ+ I Sbjct: 477 EIPLGRILYQMEVLGIRIDRQALESARESIEALARELEEEIYRLAGSRFTILSPKQVGEI 536 Query: 590 LFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMIN 649 L+ K G+ +K G ST EE L L+ +PLP+ IL YR + KL STY D + ++ Sbjct: 537 LYGKLGLPTARKGKTG-YSTDEETLTGLSGLHPLPEKILAYRQMKKLLSTYVDPISRGVD 595 Query: 650 PKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQI 709 + GR+H ++Q VTATGRLSS++PNLQNIP+R+ GR IR+ FIA E+ V++SADYSQI Sbjct: 596 AQ-GRLHGQFNQTVTATGRLSSSNPNLQNIPMRSPAGREIRKCFIAGENRVLLSADYSQI 654 Query: 710 ELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMS 769 ELR++AH S D L+ F +DIH TA +FG P VT E RR AK INFG++YGMS Sbjct: 655 ELRLLAHFSEDPELMAVFERNEDIHARTARLLFGDP---VTPETRRKAKTINFGILYGMS 711 Query: 770 AFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIK 829 AF L+ L + EAQ ++D YF +P V + +AK+ G V T+ GR+ +P++ Sbjct: 712 AFSLSLDLGVEPPEAQAFIDRYFGAFPKVGPLFDSILEEAKKTGEVRTILGRKRRIPELS 771 Query: 830 SSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVH 889 + + R ER A+N +QG+AAD+IK++M+ + +++QVHDEL+FEV Sbjct: 772 APDRRSREYGERMAVNTVLQGSAADLIKKSMVDFGQVRKDRPEVGDLLVQVHDELLFEVR 831 Query: 890 KDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 +D+++ + I LME RL VPL+V+VG G+NW AH Sbjct: 832 EDNLEDASGTIRSLMEGALRLKVPLIVQVGHGKNWVDAH 870 >UniRef50_D1Y4U0 DNA polymerase I n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y4U0_9BACT Length = 866 Score = 803 bits (2074), Expect = 0.0, Method: Composition-based stats. Identities = 295/932 (31%), Positives = 442/932 (47%), Gaps = 78/932 (8%) Query: 3 QIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 ++ ++L+DG +RA++A P L G PT A+ G NM + +P F Sbjct: 2 EMSGKKILLIDGHGIAFRAFYAIPELNAPDGTPTNALVGFFNMFARVRHDQRPDEIYAAF 61 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 D K TFR L+ YK+ R P P++ + Q+ LH M+ +G+ ++ VEADD+IG+ A Sbjct: 62 DMKEPTFRHRLYPEYKATRRPTPEEFKIQVPLLHEMLPLLGVHIMERPSVEADDLIGSAA 121 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIID 178 + G VLI T DKD+ Q++ P + ++ KYG PP+ ++D Sbjct: 122 VQFASRGDEVLILTSDKDIMQVLRPGVKILRPGKGVSSFEEYDVPHFTEKYGFPPDTMVD 181 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 +L+LMGDS DNIPGVPGVGEKTA LLQ G ++ + ++ + K+E+ Sbjct: 182 YLSLMGDSIDNIPGVPGVGEKTASKLLQSYGSIEGIMEHAGELK-------PALQKKIEE 234 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 + A + +L +K D + ++ AA+ F + A + K + Sbjct: 235 HGAQAVANRKLTRLKCD----EDLSEFTSKEAAAD-------LEAFGAFCARLGMKKAAE 283 Query: 299 AKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTET 358 + G + K + + + V + D++ + L AP A D E Sbjct: 284 SLGVTASQKERPAADPPAEAARPSPVSTGDDFGEAVPSAAAIPLDTILC-APRIALDLEE 342 Query: 359 DSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVG 418 V + E + + +A + Q + L LL++ V Sbjct: 343 SGA------PVPYTIKEETLQSRRVILAAPD-GSWWQGTLAELAPRLDELLDN---RVVC 392 Query: 419 QNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAG 478 + K ++ G +D Y+L+ + Sbjct: 393 LDAKALCYLMER---PRLGGLWDVKTAWYLLHPDLESY---------------------- 427 Query: 479 KGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLS 538 I+ E + A L + M + + V I++PL+P L Sbjct: 428 ---------DISKEIGLELSPGRALRLLAIARSMEEKIAA-QNMTRVMNEIDLPLIPSLI 477 Query: 539 RIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKP 598 +ER G+++D + + S EL +L + +K +E AG E NL+S KQ+ +LFEK G+ Sbjct: 478 GMERRGIRLDREKMLALSRELERQLNAITEKVYEAAGCEINLNSPKQIGELLFEKLGLPV 537 Query: 599 LKKTPGGAPSTSEEVLEELAL----DYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGR 654 +KKT G ST VLE+L +P +LEYR L K+ S + L G Sbjct: 538 VKKTKTG-YSTDVSVLEQLREICGARCEIPGQLLEYRELQKMASGFVQPLL-SAAGGDGL 595 Query: 655 VHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIELRI 713 +H+++ T TGRLSS DPN+QN+P + G+RIR+ I + +ADYSQIELR+ Sbjct: 596 IHSTFESLTTGTGRLSSRDPNMQNLPTYSGWGQRIRECLIPSQPGHCFAAADYSQIELRV 655 Query: 714 MAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGL 773 +AHLS D L+ F +DIH TAA +FGLP + VT E RRSAK ++FGLIYGMS FGL Sbjct: 656 LAHLSGDPQLIEIFNSDRDIHTETAAMIFGLPADAVTKELRRSAKTVSFGLIYGMSVFGL 715 Query: 774 ARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNG 833 A +L R A + MD YF PGV EYME ++ ++ E GY TL GRR + +I + N Sbjct: 716 ASRLGTDRNTAFQIMDAYFAALPGVREYMETSKKKSLEFGYTSTLFGRRRPMDEIATGNQ 775 Query: 834 ARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDV 893 + +R AINAP+QGTAADI K AM V A V M++QVHD +V E D Sbjct: 776 T-KDHQKRVAINAPIQGTAADITKIAMNKVAAHFAGR--DVAMVLQVHDSIVCECPHDQA 832 Query: 894 DAVAKQIHQLMENCTRLDVPLLVEVGSGENWD 925 + A ++ Q+ME+ L VPL E G + Sbjct: 833 EQTALELSQVMESAVHLSVPLKTERTVGTSLA 864 >UniRef50_D2RAL7 DNA-directed DNA polymerase n=2 Tax=Gardnerella vaginalis RepID=D2RAL7_GARVA Length = 1025 Score = 802 bits (2072), Expect = 0.0, Method: Composition-based stats. Identities = 311/1026 (30%), Positives = 489/1026 (47%), Gaps = 112/1026 (10%) Query: 2 VQIPQNPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAA 59 ++ + L++VDG S +RA+ A + +G+ T +++G + ML ++ + KP A Sbjct: 13 LKNEKGTLLVVDGHSLAFRAFFAISADNFSTRSGQATNSIWGFITMLSQVVKKEKPDRLA 72 Query: 60 VVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIG 119 + FD KG TFR+ + YK R P +L +Q+ + M+KA+G+ + G E DDVIG Sbjct: 73 IAFDVKGGTFRNTMLPQYKGTRDAAPQELLSQLPIIQQMLKALGVTYIEKPGYEGDDVIG 132 Query: 120 TLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPEL 175 TLA AG L+ +GD+D QL+ NIT++ + + V KY V P+ Sbjct: 133 TLAVMGSNAGYRTLVLSGDRDAFQLIDDNITVLYPGQHFKDLKEMDKNAVYEKYHVTPKQ 192 Query: 176 IIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAK 235 D AL G+++DNIPGVPGVG+ A + G L+ + +I+G Sbjct: 193 YPDLAALRGETADNIPGVPGVGDGYAAKWINQFGSLENIIEHSNEISG-------KKGEA 245 Query: 236 LEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEF----------- 284 L +N + L+ ++ + D++L +T + L A +L L + EF Sbjct: 246 LRENIDQVRLNRKVNALVCDLDLGVTVDDLCFGDVDAAKLGILLSQLEFGELKKRKILKT 305 Query: 285 ---------KRWTADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILD 335 + + + + A+ ++++ E + I + T+ D Sbjct: 306 FSNGMQQSIENNMRIMFSSTYEGDANDDKLAQSAQSNIDAENFQEMLAGIDLHHVKTVED 365 Query: 336 ---------------------------------EETLKAWIAK-------------LEKA 349 EE + ++ L+ Sbjct: 366 FIDWENSVSSLLYTKIKKDSKNTEDTFDQVSSEEENFEELNSEKIINNSRKCAEPILKNQ 425 Query: 350 PVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLL 409 V + E + L+ I A I Q S + LE+L+ L Sbjct: 426 EVVIYAHECNKNSKHHFELIADCLIILIANKAAI-----LYTTDLQSSDQALLEMLRKFL 480 Query: 410 EDEKALKVGQNLKYDRGILANYGIELRGIAF-----DTMLESYILNSVAGRHDMDSLAER 464 + ++ V + K G+L + + +F DT L SY+L ++++AE Sbjct: 481 QKNSSITVLHDYKKHLGLLKSLKLFDSNNSFGTPLLDTRLASYLLEPDFRAETLENMAEH 540 Query: 465 WLKHKTITF---EEIAGKGKNQLTFNQI--ALEEAGRYAAEDADVTLQLHLKMWPDLQK- 518 +L +++ E A +G+ L + + EE A L + L Sbjct: 541 YLDIQSVEDNLGENEAKQGELDLLIDNEVSSSEEETNEKQTQAREAKFLKTALLIRLLAL 600 Query: 519 -------HKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAH 571 + + ++EMP+ VL +E G +D + L ++ + + A Sbjct: 601 HFASTLDDRKQTGLMTDLEMPISRVLRGMEDVGAAVDMQRLSGMLKQFSADAEFAQNMAW 660 Query: 572 EIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLE----ELALDYP---LP 624 ++AG NL S KQLQ ILFE G+KP ++T G+ +T+ E L+ +L + P Sbjct: 661 KVAGSSVNLQSPKQLQQILFEHFGLKPTRRTKNGSYTTNAEALQAMYVKLDPEEPASQFL 720 Query: 625 KVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNE 684 +L++R KLK L + R+HT++ Q + ATGRLSS DPNLQNIP RN Sbjct: 721 GALLKHRETNKLKQI-VQSLIDAAHYDDRRIHTTFEQTIAATGRLSSADPNLQNIPNRNA 779 Query: 685 EGRRIRQAFIAPEDYV-IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFG 743 GR IR AFI E++ ++S DYSQ+ELRIMAH S DK L+ AF G D H+ A+ V+ Sbjct: 780 AGREIRAAFIPGEEFEYLMSCDYSQVELRIMAHASHDKTLIEAFRSGVDFHKYVASLVYK 839 Query: 744 LPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYME 803 +P+E VT +QR KA+++GL YG+S +GLA+QL+I EA+ + YF+ + V +Y+E Sbjct: 840 IPVEQVTPDQRSHVKAMSYGLAYGLSTYGLAKQLSISPAEAEMLKNKYFDTFGNVHDYLE 899 Query: 804 RTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAV 863 ++AKE GY ET+ GRR Y P + S+N A R AAER A+NAP+QGTAADI+K AM+ V Sbjct: 900 SLVSKAKELGYTETMFGRRRYFPQLSSNNRASREAAERGALNAPIQGTAADIMKLAMLRV 959 Query: 864 DAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGEN 923 D L+ + R R+I+Q+HDEL+ E+ + V + + MEN LDVPL V G G + Sbjct: 960 DLGLREAKVRSRVILQIHDELILEISHGEQAQVENIVRKAMENAVHLDVPLSVSTGVGVD 1019 Query: 924 W-DQAH 928 W AH Sbjct: 1020 WQLAAH 1025 >UniRef50_C7LZ56 DNA polymerase I n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZ56_ACIFD Length = 886 Score = 800 bits (2067), Expect = 0.0, Method: Composition-based stats. Identities = 305/917 (33%), Positives = 447/917 (48%), Gaps = 67/917 (7%) Query: 19 YRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKTFRDELFEH 76 +RA++A P + +G T A++G +ML +++ Q +PTH AV DA+G TFRD + E Sbjct: 25 FRAFYALREPMMRTESGVATNALFGFASMLANVVAQTRPTHLAVALDAEGPTFRDAILES 84 Query: 77 YKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKAGRPVLIST 136 YK R P PDDLR Q++ +++A+G+P + SG EADDVI TLA A AG I T Sbjct: 85 YKGTRAPTPDDLRQQLDAARGLLEAIGVPAVEASGFEADDVIATLATRARDAGIATRIVT 144 Query: 137 GDKDMAQLV-TPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLALMGDSSDNIP 191 GD+D+ QLV P I ++ T +V+ YGVPP D +L GDSSDN+P Sbjct: 145 GDRDLLQLVEDPLIVVLLTRKGVSNLEAFDEAKVLETYGVPPARYGDLASLRGDSSDNLP 204 Query: 192 GVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQLAT 251 GVPG+G KTA ALL ++ + A + ++ LEQ + + L Sbjct: 205 GVPGIGPKTAAALLDRFESIEGILAHLDALSA-------RQREALEQARSQLLEARLLTQ 257 Query: 252 IKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAKPQET 311 ++ DV + + L + L V + + A A Sbjct: 258 LRRDVAELPSLDALRLGPWDPRRAETLM-----------VGTFELRRPFQALVRAFEGRP 306 Query: 312 SVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGL 371 + DE P V + V + E L T + D + +V L Sbjct: 307 TAGDEPPPVESPVAHLTDVSAAAVVERLA--------PGATVAVAATFAGDPGRSRVVEL 358 Query: 372 SFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANY 431 + +E V A P S K ++ R ++ + Sbjct: 359 ALGVEGVVWAGSPEDAPTHLWEALGSCVLVGAGPKEIV---------------RSLVMEH 403 Query: 432 GIELRGIAF-DTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIA 490 + L A D + ++++S H +D LA RWL + Sbjct: 404 AVPLEPRALVDLEVLGWLVDSADVAHGLDQLARRWLGRHLDDRGPL-------------E 450 Query: 491 LEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPK 550 E A A + +V + + L + + ++E+PL VL+ +E +GV ID Sbjct: 451 AEAAPLGARQWVEVVHPIREALERRLTEDD-LWRLATDVEIPLTRVLTDMEIHGVAIDRD 509 Query: 551 VLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTS 610 VL EL + AG E N +S +QL +LFE+ G+ +KT G ST Sbjct: 510 VLAAIGTELATERDRALAEVRHYAGGELNPNSPRQLAVVLFERLGLPAGRKTKTG-YSTD 568 Query: 611 EEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLS 670 VLE L +P+ IL +R L KL ST+ + L I GR+H +++QAV TGR+S Sbjct: 569 ARVLESLRDAHPIVAAILRFRELDKLLSTFYEGLRSEI-GADGRIHATFNQAVARTGRIS 627 Query: 671 STDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEG 730 S PNLQNIPVR +EG+R R AF+A E +V+V+ADYSQIELR++AHLS D+ L+ + Sbjct: 628 SERPNLQNIPVRTDEGKRFRDAFVATEGHVLVAADYSQIELRVLAHLSGDEELVRILSGD 687 Query: 731 KDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDL 790 D+H AA VFG+P E VT +QR AK + +GL YGM A+GLA++L +P EA+ + Sbjct: 688 GDVHTLVAARVFGVPAERVTPQQRSVAKMVTYGLSYGMEAYGLAQRLGVPPAEAEGILAD 747 Query: 791 YFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQG 850 +F +PG+ Y + + A+ QG+ TL GRR YLPD+ S N R AER A+NA QG Sbjct: 748 FFAAFPGLRHYRDASVDAARAQGFTTTLLGRRRYLPDLDSPNRTVRQGAERQAMNAGTQG 807 Query: 851 TAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRL 910 AADI K A++ + A L +++QVHDE+V E + V + ++E+ L Sbjct: 808 LAADIFKIALVRLHAALSPTDG--ALVLQVHDEVVVEAVAERAHDVRALVEDVLEHAFAL 865 Query: 911 DVPLLVEVGSGENWDQA 927 VPL V+ G G +W +A Sbjct: 866 RVPLRVQSGVGRSWGRA 882 >UniRef50_C8NZ98 DNA polymerase I n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZ98_ERYRH Length = 833 Score = 797 bits (2060), Expect = 0.0, Method: Composition-based stats. Identities = 302/926 (32%), Positives = 462/926 (49%), Gaps = 101/926 (10%) Query: 7 NPLILVDGSSYLYRAYHAFP---PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 N L+L+DG+S L+RAY+ + +S+G T A+YG ML I PTH V FD Sbjct: 2 NKLLLIDGNSMLFRAYYGTLSRGYMKSSSGVVTNAVYGFSTMLAKAIEIINPTHVLVAFD 61 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 K KTFR ++F+ YK R + ++L +Q + + A + +SG EADD+IGT++R Sbjct: 62 TKDKTFRHDMFDEYKGTRKEVDEELVSQFALVREFLDAYPIKRFELSGYEADDIIGTMSR 121 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDF 179 V I T D+DM QL+ N+ ++ ++ ++++ G+ P+ I+D Sbjct: 122 MYPD--FKVEILTSDRDMLQLIDDNVDVLLMKKGLTDLRLMDKTSLMDEMGIEPKQIVDM 179 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 ALMGD+SDNIPGVP +GEKTA LL + LY E+I G M K+ + Sbjct: 180 KALMGDTSDNIPGVPSIGEKTALKLLGQYTTFENLYVHKEEIKG-------KMGEKIREF 232 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 +E A +SY+LA I T V L++ ++ + E L ++KY+ Sbjct: 233 EEQARMSYKLAEIHTSVPLDIDLSSIKY-EIPNESLNAFYRKYDM--------------- 276 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 + + + + E + K + A E D Sbjct: 277 ---------------------NSLITDNYDVEVVEKETIEFTNLDSSWKKSMIAISMELD 315 Query: 360 SLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQ 419 N+ + + Y+ + + L V Sbjct: 316 KKGNLEG-----CYLSDGKENIYLTFGEMVGNEAFKA------------LISSDTSIVVD 358 Query: 420 NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 + K IE+ D +L ++I+NS ++ G Sbjct: 359 SSKSLYRFCLENNIEIANQFDDLLLLAFIVNSSIT--------------TMARLKDEFGL 404 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 ++ E A L + + K + L+V+E IE PLVP+LS+ Sbjct: 405 WFHEY--------EGMEKGAAFTQAILSQFNTLKTEANKIE-VLSVYEEIEKPLVPILSK 455 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 E G+ +D VL + ++ L + +E+AG EFNL+S KQL +LF+ + Sbjct: 456 CEFRGINVDRSVLDEIALVTHQKIETLSNQVYELAGMEFNLNSPKQLAEVLFDHLKLPTK 515 Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 KK ST+ +VLE L ++ + ILEYR KL STY L I+ G++HTS+ Sbjct: 516 KKR-----STAVDVLEGLIEEHAIIAPILEYRKYQKLYSTYAVGLTKHIHA-DGKIHTSF 569 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSR 719 +Q T TGRLSS+DPNLQNI VR+EE R IR+AF+A E ++S DYSQIELR++++L+ Sbjct: 570 NQHATQTGRLSSSDPNLQNISVRDEETRMIRKAFVASEGCTLMSIDYSQIELRVLSYLAD 629 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 +K ++ AF G DIH TA +FG+ + VTS RR AK++NFG++YGMS +GL++QL+I Sbjct: 630 EKRMMEAFNGGHDIHSETAKAIFGV--DDVTSTMRRQAKSVNFGIVYGMSEYGLSKQLDI 687 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 EA+ ++ Y E YP + +YM+ GYV+TL RR Y+P+I +N A + Sbjct: 688 TIPEARHFITRYNEIYPNITKYMDSVVEDCLRDGYVKTLFNRRRYIPEIYDANRAVKDFG 747 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 +RAA+NAP+QGTAADIIK AMI D L + + MI+QVHDELVF+V+ D+++ + Sbjct: 748 KRAAMNAPIQGTAADIIKIAMIKADELLTSNNYKSSMILQVHDELVFDVYDDELEQIQDL 807 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWD 925 + +ME+ + L V V +G++W Sbjct: 808 MVSVMEHIVSWPIDLNVSVDTGKDWY 833 >UniRef50_C1TPP4 DNA polymerase I n=2 Tax=Synergistaceae RepID=C1TPP4_9BACT Length = 854 Score = 794 bits (2051), Expect = 0.0, Method: Composition-based stats. Identities = 310/932 (33%), Positives = 456/932 (48%), Gaps = 88/932 (9%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFD 63 + + P++ VDG +RA++A P LT G PT A+ G NML + ++ P +VVFD Sbjct: 1 MTEGPIMFVDGHGLAFRAFYAIPELTAPDGTPTNALVGFFNMLSKIKKEWAPQSLSVVFD 60 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 A GKTFR E+FE YK R P P++ + Q+ L M+ +G+P++ GVEADDVIG ++R Sbjct: 61 APGKTFRHEMFEEYKKGRKPTPEEFKVQLPILKKMLGLLGIPVICRPGVEADDVIGAVSR 120 Query: 124 EAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNT----ILGPEEVVNKYGVPPELIIDF 179 E G PVL+ T DKDM Q++ IT+I E +YG PP + D+ Sbjct: 121 EYAYKGTPVLVVTSDKDMLQILDEGITVIRPGKGISSFNRWDAETFQGEYGFPPARMADY 180 Query: 180 LALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQN 239 LAL+GDS DN+PGVPG+G+KTA+ LL G L+ + A + KLE+N Sbjct: 181 LALVGDSVDNVPGVPGIGDKTARRLLGKYGDLEGILAHTADLTA-------GQRKKLEEN 233 Query: 240 KEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 ++A S L T+ D L P ++ + L ++ + + Sbjct: 234 ADLARKSLILTTLSVD--GAPDDVDLVCGVPDSDGFIALCRELGMSSLERSMGDLICGE- 290 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 + D + E A +S ++ L + AF + Sbjct: 291 ----------TSFSGDSSVEKEAQSLSLVELKSV----ELDELL----MCDELAFHGKWT 332 Query: 360 SLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQ 419 +S L + G + P ++S LE + D K L V Sbjct: 333 GEYPMSLVADPLVVCSKDGRFW------SGSEMPFELSSW--LERGSVITSDYKRLLVAM 384 Query: 420 NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 + D +D Y+L+ HDM S+ T Sbjct: 385 GVPSDY-----------SRVWDLRSVDYLLHPDKASHDMPSVMGDDCPESTE-------- 425 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 E A +L + + + +G V I+MPLVPVL Sbjct: 426 --------------------ERAMALWRLRDDLSQTI-ESRGLSEVLYGIDMPLVPVLVS 464 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 +E++G+K++ VL + +L RL + ++ AGE NL+S KQ+ +LFEK G+ P+ Sbjct: 465 MEKSGIKLEEPVLQDVISDLKERLERIVEEITSAAGESINLNSPKQVGCLLFEKLGLPPV 524 Query: 600 KKTPGGAPSTSEEVLEELAL----DYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRV 655 KKT G ST VLE+LA +P ++LE+R L+K+ S + L + G + Sbjct: 525 KKTKTG-YSTDVTVLEQLAELPEPHNAVPSMLLEHRALSKMSSGFALPLMSSVCG-DGII 582 Query: 656 HTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPE-DYVIVSADYSQIELRIM 714 +++ T TGRLSS DPNLQN+P E RI+ + I E V+ADYSQ+ELR++ Sbjct: 583 RSTFESDTTGTGRLSSRDPNLQNLPAYGEWSDRIKSSLIPREKGRCFVAADYSQVELRVL 642 Query: 715 AHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLA 774 AH+S +K L F G+DIH TA+ VFG+ VT E RRSAK + FGL+YGMSAFGLA Sbjct: 643 AHISGEKRLADIFRSGRDIHTETASMVFGVDSSMVTKELRRSAKMVTFGLLYGMSAFGLA 702 Query: 775 RQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGA 834 ++L + R EA + M YF PGV Y+ ++ +A +GY ETL GR L ++ + N Sbjct: 703 KRLGVGRSEADRIMSRYFAALPGVEAYVTKSADEAIAKGYTETLFGRIRPLEEVVTGNTR 762 Query: 835 RRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVD 894 R R AIN+P+QGTAAD+ K+AMIAV AE P V M++QVHD +V E ++ + Sbjct: 763 DRGHIRRVAINSPIQGTAADLAKKAMIAVSRSF-AEDPDVSMVLQVHDSIVCECPEERSE 821 Query: 895 AVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 V ++ ++M+N L VPL E G + + Sbjct: 822 EVLAELQEIMKNVASLAVPLETEGKIGFSLAE 853 >UniRef50_D2NTK8 DNA polymerase I n=2 Tax=Rothia mucilaginosa RepID=D2NTK8_9MICC Length = 1003 Score = 782 bits (2019), Expect = 0.0, Method: Composition-based stats. Identities = 326/1010 (32%), Positives = 478/1010 (47%), Gaps = 101/1010 (10%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLT---------NSAGEPTGAMYGVLNMLRSLIMQYKPT 56 L+L+DG S R++ + S G+ T A++ L+ L S+I +P+ Sbjct: 5 NKTLLLIDGHSLALRSFFGIYTMAEKTGQHIFVRSDGQHTEAVHAFLSTLLSIIKDNQPS 64 Query: 57 HAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADD 116 H AV FD G TFR + YK R +P+ QI+ + M+ A+ +P L EADD Sbjct: 65 HIAVAFDLPGGTFRTAEYGEYKGGRNAIPEAFNGQIDLIKKMLGALNIPALTYENYEADD 124 Query: 117 VIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN------TILGPEEVVNKYG 170 ++ TL R +AG VLI +GD+D+ QLVT ++TL+ +T + P V K Sbjct: 125 IVATLTRRGTEAGYKVLILSGDRDIFQLVTDDVTLLYPVTTGPSKGIQRMDPAAVEKKTK 184 Query: 171 VPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAK 230 VPP + D AL G+ +DN+PGVPGVG A L G L + +KI G Sbjct: 185 VPPHMYPDLAALTGEQADNLPGVPGVGPGFAAKWLGEYGSLQGVLDNRDKIGG------- 237 Query: 231 TMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTAD 290 L +N + + +L + D++L +T E + L F + EF+ Sbjct: 238 KKGEALRENVDNVVRNRRLNQLVNDLDLNVTLEDTAFTP-DLDALNTFFDEVEFRTIRKR 296 Query: 291 VEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAP 350 + A A + A E Y I K A +A Sbjct: 297 AADTLGPIVRAAGSAGATSSAAEAGEEGAPKKAPTGP-VYAPINTSAPTKNADAAAFRAF 355 Query: 351 VFAFDTETDSLDNISANLVGLSFAIEPGVAAY----IPVAHDYLDAPDQIS--------- 397 A E D + + +E V Y +PVA + + Sbjct: 356 CSAAAEENYGTD-EQGAPIAVPERLEGAVTLYPVTNLPVARPAIGDAPAVKVTKTKIRAA 414 Query: 398 -------------------------RERALELLKPLLEDEKALKVGQNLKYDRGILANYG 432 L L DE A K+ +LK R +L YG Sbjct: 415 EENPELLGVLLTSKSTSLWIDTRTIDPELDAALAAWLSDEAARKIVMDLKVQRKLLRAYG 474 Query: 433 IELRGIAFDTMLESYILN--SVAGRH----DMDSLAERWLKHKTITFEEIAGKGKNQLT- 485 EL G D L SY+ A R M+ LAER+L + ++ + + Sbjct: 475 YELAGAVEDPALSSYMCGFIPTATRKLFSERMEDLAERYLWIPKEPYAQLVFQPEEDEAE 534 Query: 486 ------FNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 + + RY + + + +L + ++++H G L V+E IE+PL+ VL+ Sbjct: 535 PSLFSLPGEAEPVDNLRYFTQISRIIHELARLLHYEMEEH-GQLKVYEEIELPLLYVLAD 593 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAG---------EEFNLSSTKQLQTIL 590 +E+ G+ + +L + + R + ++ A I G E NL+S KQLQT+L Sbjct: 594 MEQAGIAVSDALLTELHDTFSARANQAQESARAIIGGEVATEDGEEPLNLASVKQLQTVL 653 Query: 591 FEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPK------VILEYRGLAKLKSTYTDKL 644 FE G+ +K G + +E V E L+ P + YR KL T + L Sbjct: 654 FETLGLPHTRKIKSGYSTDAESVTELLSKISPESDGAAFLGALAAYRDNIKLAQT-VEGL 712 Query: 645 PLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYV---- 700 + GRVHT++ Q +TGRLSST PNLQNIP+R EEGRRIR AFI + + Sbjct: 713 QKAA-TEDGRVHTTFQQGAASTGRLSSTAPNLQNIPIRTEEGRRIRGAFIVAPEPIDGVE 771 Query: 701 ---IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSA 757 +++ADYSQIE+RIM HL+ D+ L+ A+ G+D+HR +EVFG+ E VT EQR Sbjct: 772 YEGLLTADYSQIEMRIMVHLAADEKLIAAYEAGEDLHRYVGSEVFGVAPEDVTPEQRSKV 831 Query: 758 KAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVET 817 KA+++GL YG+S FGLA+QLNI EA + YF+R+ V ++ QA + GY ET Sbjct: 832 KAMSYGLAYGLSRFGLAKQLNISSDEAGELRTNYFKRFGRVGRFLRGVLKQAHQDGYTET 891 Query: 818 LDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMI 877 + GRR LPD+ S N RR AAERAA+NAP+QGTAADIIK AMI + L+ E + RM+ Sbjct: 892 IFGRRRVLPDLDSPNRVRREAAERAALNAPIQGTAADIIKIAMINIHRRLREEGLKTRML 951 Query: 878 MQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 +QVHDE++ EV + +A + + + M L VPL V+VG G++W +A Sbjct: 952 LQVHDEIILEVATGEREAAERVLVEEMSGAASLRVPLDVQVGWGKSWQEA 1001 >UniRef50_Q2SRK9 DNA polymerase I n=4 Tax=Mollicutes RepID=Q2SRK9_MYCCT Length = 911 Score = 780 bits (2015), Expect = 0.0, Method: Composition-based stats. Identities = 277/954 (29%), Positives = 467/954 (48%), Gaps = 79/954 (8%) Query: 6 QNPLILVDGSSYLYRAYHAFPP------LTNSAGEPTGAMYGVLNMLRSLIMQYKP-THA 58 + +++VDG+S ++RA++A L +G T A+Y +NML S+I Q P H Sbjct: 2 KTKILVVDGNSLIFRAFYATAYSPNTSLLKTKSGVLTNAVYSFINMLLSVIHQRGPYDHI 61 Query: 59 AVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVI 118 + FD KTFR +L YK++R P++L Q + + + +EADD+ Sbjct: 62 LIAFDKGKKTFRHDLLSDYKANRIKTPNELVEQFSIVREFLTKANIQWFEQENIEADDIA 121 Query: 119 GTLAREAEKA--GRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVP 172 G++ + AEK I + DKDM QL+T + +N + + ++ K+ + Sbjct: 122 GSICKYAEKQFDNLQAEILSSDKDMYQLITNKVICLNPVQGVNELEEVDTNKLFEKWQIL 181 Query: 173 PELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTM 232 P + D+ A++GDSSDN+ GV G+G+K A L+Q L+ +Y E+I G + Sbjct: 182 PNQVPDYKAIVGDSSDNLKGVNGIGQKGAIKLIQQYQNLENIYNNLEQIKG-------AI 234 Query: 233 AAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVE 292 KLEQ+K++A+L LATIKTDV LE + + + KYE Sbjct: 235 KTKLEQDKKMAFLCKDLATIKTDVTLEN--FSFKKLDFNVDNIYEFLNKYEMYSLKKRFT 292 Query: 293 AGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVF 352 L + + LD + +W E + + Sbjct: 293 NILNLDFNPYQNKKQN-------------------------LDVRIINSWSKDYEDSINY 327 Query: 353 AFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDY--LDAPDQISRERALELLKPLLE 410 E+ D ++G+ + G Y+ + L + + L + L Sbjct: 328 -LYVESLEEDYHKDKIIGIGISNNKGN-FYLDFKNKAQQLSFFEDTTLSSTDSLFEEFLN 385 Query: 411 DEKALKVGQNLKYDRGILANYGIEL--RGIAFDTMLESYILNSVAGRHDMDSLAERWLKH 468 + K ++K +L N+ + FD M+ Y LN+ D+ + + Sbjct: 386 NSNLKKYTYDIKKTTYLLKNHKYNVLASNFDFDFMVACYSLNANVVS-DLSNQIKLVDNL 444 Query: 469 -KTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFE 527 + T +EI GKG + I L+ +Y ++ A + + ++ L++ +++ Sbjct: 445 IELETIDEIFGKGVKK--NPDIDLDIKSKYISKKAYLLKKYSDQLIEQLKQT-NTYDLYL 501 Query: 528 NIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEE----FNLSST 583 I+ PL+ VL IE G+ ID + L ++++ ++ +E + + EE FN SS Sbjct: 502 KIDHPLIEVLYDIEVQGILIDKEQLKLQTQQILKKINHIEWQMKILVAEEIDNNFNFSSP 561 Query: 584 KQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDK 643 KQ+Q +LF+K + L+K +TS+EVLE+L +P+ ++LE+R KL +TY Sbjct: 562 KQIQELLFDKLKLPNLEKG-----TTSKEVLEKLITYHPIINLLLEHRKYTKLYTTYLKG 616 Query: 644 LPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVS 703 I +VHT ++ +T TGRLSS+ PN+QNI +R+ E + +R+ FI + +S Sbjct: 617 FEKFIF-DDNKVHTIFNHTLTNTGRLSSSYPNIQNISIRDNEQKEVRKIFITNNNKTFLS 675 Query: 704 ADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFG 763 DYSQIELR++A +S++ L+ AF + DIH A +F L + +TSEQRR AK NFG Sbjct: 676 YDYSQIELRVLAQMSKETNLINAFNQNADIHLQAAKLIFNLSDDQITSEQRRIAKVFNFG 735 Query: 764 LIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRL 823 ++YG++ FGLA LN+ +A++ + Y+ +P +L++ E+ A +GY+ TL RR Sbjct: 736 ILYGLTDFGLASDLNMNVNQAKQMIKDYYSAFPSLLDFKEKQVEIATSKGYITTLSNRRR 795 Query: 824 YLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDE 883 Y+ ++ S+N R +R A+N P+QGTA+DI+K AMI++ L+ + ++I Q+HDE Sbjct: 796 YINELNSTNHNIRQFGKRIAVNTPIQGTASDILKVAMISIYKKLKEQNLDAKIICQIHDE 855 Query: 884 LVFEVHKDDVDAVAKQIHQLMENCTR---LD--------VPLLVEVGSGENWDQ 926 ++ EV + ++ K + +EN LD V L V G+ W Sbjct: 856 IILEVDDNQLEQTKKIVVSELENALEKLFLDLNIKDQVVVKLKVGESVGKTWFD 909 >UniRef50_D1B5M0 DNA polymerase I n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B5M0_THEAS Length = 836 Score = 754 bits (1947), Expect = 0.0, Method: Composition-based stats. Identities = 273/933 (29%), Positives = 433/933 (46%), Gaps = 113/933 (12%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 + +LVDG +RA++A P L+ G P A+ G LNML ++ +PT A+ FD G Sbjct: 3 DRFLLVDGHGLAFRAFYALPALSAPDGTPVNAVLGFLNMLYKVLEDQRPTGWAIFFDPPG 62 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 R E+ E YK+ R P P + + Q+ + +++A+G P+ G EADDVI A Sbjct: 63 PVIRREVLESYKAGRRPTPQEFKVQLPIIIDLLEALGHPVHVREGQEADDVIAATAVNLS 122 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLAL 182 +G V+I + DKD+ Q+++P++ + + + E + +Y PP L+ D+LAL Sbjct: 123 GSG-EVVILSADKDLLQVISPSVKVCRPVKGVSEFRVYDQEAFLEEYRFPPALMADYLAL 181 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 GDS DNIPGVPG+G+K A+ L+ LG L+++Y + R + +LE+ +E+ Sbjct: 182 TGDSVDNIPGVPGIGDKGARELVSSLGPLESIYEALD-------RLSPAKRKRLEEGREL 234 Query: 243 AYLSYQLATIKTDVELEL---TCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 A+LS QL + + L ++ L + + ++ + + Sbjct: 235 AFLSRQLV-----LPVPTESLDVRDLVPREAQRGRALRILEGLAMRQLIQRLGLDGADRG 289 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359 G + ++ +++ + L + A + Sbjct: 290 AGVEVSS----------------------------TGGAVESSLEDLLASGTLALVGRWE 321 Query: 360 SLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLED-EKALKVG 418 L S+ L A L+ L+ +LE + Sbjct: 322 ELQRGSSELALW------------------DKAGGLWRGAVDLDRLRRILEAFGDRELLL 363 Query: 419 QNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAG 478 + K L + D L Y L+ L ++G Sbjct: 364 WDQKGLISALG--DLPRGCSVMDLKLCYYGLHPDRTAVMGRDLVS----------GALSG 411 Query: 479 KGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLS 538 + ++QI + G + ++ PL VL Sbjct: 412 QWNPWTLWDQIRSDPLWE------------------------GVRELVTRVDHPLSAVLV 447 Query: 539 RIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKP 598 +ER G+ +D + L E L L LE+ AG + NL S KQ+ +LFE+ G+ P Sbjct: 448 DMEREGIGLDVEGLRGLRERLERALGALEEGIAREAGAQVNLQSPKQVAWLLFERLGLPP 507 Query: 599 LKKTPGGAPSTSEEVLEELALDYP----LPKVILEYRGLAKLKSTYTDKLPLMINPKTGR 654 +K+T G ST VLEEL+ +P +ILE+R ++KL + + + +G Sbjct: 508 VKRTKTGL-STDVGVLEELSRLPEPLGRVPSMILEHREISKLITAFVNPFLEQ--GSSGV 564 Query: 655 VHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIA-PEDYVIVSADYSQIELRI 713 + +++ Q T TGRLSS DPN+QN+P R+ + E V VSADYSQIELR+ Sbjct: 565 IRSTFDQTGTGTGRLSSRDPNVQNLPQFGHWAVEFRRCLVPVEEGNVFVSADYSQIELRV 624 Query: 714 MAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGL 773 +AHLS ++ L+ AF EG D+H TA+ ++G+ + V+ EQRR AK +NFGL+YGM A GL Sbjct: 625 LAHLSGEERLIRAFEEGADVHARTASWIYGVDPQAVSPEQRRFAKVVNFGLLYGMGAHGL 684 Query: 774 ARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNG 833 A+++ + R EA + M+ YF PGV E+ R QAK +GY TL GR L ++ + G Sbjct: 685 AQRMGVSRSEAAEVMERYFSALPGVREFTRRMVEQAKARGYAATLMGRVRPLSEVSTVEG 744 Query: 834 ARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDV 893 A +R AIN P+QG+AADI ++AM+ + L RM++QVHD +V V + Sbjct: 745 RGAGAIDRVAINTPIQGSAADIARKAMVELHRALA--GGDCRMVLQVHDSIVCSVPEGMA 802 Query: 894 DAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 VA+ + ++ME L VPL+VEV +G Sbjct: 803 SRVAELMREVMEGAASLSVPLVVEVKTGGTLGD 835 >UniRef50_Q2GD93 DNA polymerase I n=2 Tax=Neorickettsia RepID=Q2GD93_NEOSM Length = 829 Score = 753 bits (1944), Expect = 0.0, Method: Composition-based stats. Identities = 293/924 (31%), Positives = 459/924 (49%), Gaps = 122/924 (13%) Query: 8 PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 L+++D ++L+ AY A P LT++ P GA+YG LN+L + KP + V D Sbjct: 4 TLMIIDAYNFLFSAYFALPNLTHNE-LPVGAVYGFLNILLKHLRT-KPEYLVVALDHGKS 61 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 TFR+ ++ +YK++RPP+P +L Q L V + L L + G EADDVI TL R+ K Sbjct: 62 TFRETIYNNYKANRPPVPGNLTPQFALLRECVDVLNLNPLEIEGFEADDVIATLVRKFSK 121 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSS 187 + + I + DKD+ QLV N+ +IN + N I+G EV K+GV P + DFL+L+GD+S Sbjct: 122 SDLKIKILSTDKDLMQLVNENVHVINPIKNRIIGVNEVKEKFGVFPTQMTDFLSLVGDTS 181 Query: 188 DNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSY 247 DNIPGVPG+G KTA LL G ++ + L ++ + LS Sbjct: 182 DNIPGVPGIGVKTAAKLLNTFGAIENFRLN--------EISPARIKESLLRHHDQLTLSK 233 Query: 248 QLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAK 307 +L ++ D+ ++ + + + QQ +LL +KY FK + Q + Sbjct: 234 RLVSLVDDINIQCSLDCIRYQQQDGTKLLAFLEKYGFKNLIPKLVKSTPKQLLHITKSTN 293 Query: 308 PQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISAN 367 + AK E + E A+ Sbjct: 294 KIND----------------------------FSLSAKYEGQITIYKNGEKTIFSTREAS 325 Query: 368 LVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQ--NLKYDR 425 ++G L +L+ L D K+ N+ Sbjct: 326 IIG------------------------------DLNMLQDLFTDRSIKKIFHSDNIP--- 352 Query: 426 GILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLT 485 + D + +Y LN++ D++ L +L Sbjct: 353 -----HPDPTNDSFEDLKVIAYPLNTLNT--DLEYLFSHYLG------------------ 387 Query: 486 FNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGV 545 + + E + E L+ K+ + K L ++ ++ PL+ + +E+NG+ Sbjct: 388 --ETSREAFHKRLNE-------LYEKLCNAMFTEK-VLTLYYKVDKPLINAIKHMEKNGI 437 Query: 546 KIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGG 605 +D + L + S +++ +L E+E K +IAG+ F+L S KQL +LFE+ I KK G Sbjct: 438 SLDVEQLLSLSTQISGKLEEIESKIFDIAGKTFSLQSPKQLGKVLFEEMQIPVQKKLKSG 497 Query: 606 APSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINPK--TGRVHTSYHQA 662 ST EVL L++ Y + +L +R KLK+ Y D L L +NP R+ T+Y Sbjct: 498 LSSTDNEVLTSLSIQGYEIADYLLSWRHYIKLKTAYIDPLLLKVNPNEEKHRISTTYSAT 557 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKG 722 +T TGRLSS++PNLQNIP + IR+ F A E + + ADYSQIELRI+A+++ + Sbjct: 558 LTLTGRLSSSNPNLQNIPRE----KEIRKIFTAKEGHHFLCADYSQIELRILAYIANVER 613 Query: 723 LLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRK 782 L A A G D+H TA+++F + +T + R AKA+NFG++YG++ FGL++QL I ++ Sbjct: 614 LKCALASGTDLHTLTASQIFK--TDKITPDLRNKAKAVNFGIVYGITNFGLSKQLAISKE 671 Query: 783 EAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERA 842 EA Y+ YF+ YP + YM R QA++ YV+T+ R+ + +I S+N AER+ Sbjct: 672 EAASYIQKYFDEYPEIKIYMNHIRNQARKDTYVKTMMNRKCPIQNINSNNRTISLVAERS 731 Query: 843 AINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQ 902 AINAP+QGTAADII+ AM+ + Q ++ M+MQVHDELVFE+ D + +AK+I + Sbjct: 732 AINAPIQGTAADIIRTAMVRMA---QEKELLSHMVMQVHDELVFELETDVIQQLAKKIKR 788 Query: 903 LMENCTRLDVPLLVEVGSGENWDQ 926 +ME +PLLVE+ G N + Sbjct: 789 IMEESH--GIPLLVELKHGPNLGE 810 >UniRef50_D1AV04 DNA polymerase I n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AV04_STRM9 Length = 861 Score = 745 bits (1924), Expect = 0.0, Method: Composition-based stats. Identities = 287/930 (30%), Positives = 469/930 (50%), Gaps = 84/930 (9%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 ++++D S+ +YRAY A NS GEP GAM G + L + + P + D K Sbjct: 2 KKILILDTSAIMYRAYFALMNFRNSNGEPVGAMLGFIKQLELALSYFSPEYVIAAKDVKR 61 Query: 67 KT-FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 R E+++ YK +R MPD+L Q++ + +++ G+P++ + EADDVI +++++ Sbjct: 62 AELKRREIYKEYKENRSGMPDELVMQLDAIDGILEGYGIPIIKIPSYEADDVIASISKKY 121 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTN-------TILGPEEVVNKYGVPPELIID 178 K ++I TGDKD+AQL+ PN ++ I E+V+ GV I D Sbjct: 122 SK-DYEIIILTGDKDLAQLINPNTSIALLGKKDENEPYKIIENDEDVIEYLGVKSYQIKD 180 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 L+GDSSD IPGV G+G KT L+ +D +YA + I G + K+ Sbjct: 181 LFGLIGDSSDGIPGVLGIGPKTGAKLIAEYDNIDNIYANIDNIKG-------ALQKKIIA 233 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQ 298 +K++AY+S +LAT+ +++++L E ++++ ++L ++ KYE ++ + K Sbjct: 234 SKDLAYISRELATVFDELDIDLNIEDAKIKEKDFDKLSEIYLKYELRKEYEKLVKDKP-- 291 Query: 299 AKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTET 358 K + + S+ D ++ + Y+ Sbjct: 292 -KMDLKINEIEYPSLNDFITKINSVNEEISIYLGEE------------------------ 326 Query: 359 DSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVG 418 G++F + V ++ + + ++ R + D Sbjct: 327 -----------GIAFCNKDEVHYTFDISEEIGNLFEKGVSIRDI--------DSNLNVCI 367 Query: 419 QNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAG 478 + K N GI + FD +L S+ L + + ++++A L ++ Sbjct: 368 YSGKE----WKNLGINFKN-YFDILLASFTLGTDKSQK-LETMAFDKLGLSIEEIDKKIL 421 Query: 479 KGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLS 538 + +F +E +L L+K L+++ E VL Sbjct: 422 NKFDATSF----IEYRKNRLITMTYAIFKLKEVFMDLLEKE-NQLDIYLE-EKEFTDVLI 475 Query: 539 RIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKP 598 +E+ G+ I+ ++ EL ++ ++E K + +GE FN+SS KQL +LFE GI+ Sbjct: 476 YMEKQGIAINQNYFEKYNLELEKKIKDIENKIYIESGESFNISSPKQLGEVLFETMGIEG 535 Query: 599 LKKTPGGAPSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHT 657 +KK G ST EVLE L + +++LEYR L KLKSTY + L + GR+HT Sbjct: 536 VKKNKRG-YSTDAEVLELLRDRGIKIAELLLEYRELVKLKSTYVEPLLKL--SINGRIHT 592 Query: 658 SYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHL 717 +Y+Q TATGRLSS++PNLQNIP R EG +IR+ FIA + +VS DYSQIELR++A + Sbjct: 593 TYNQTGTATGRLSSSNPNLQNIPTRTYEGTKIREGFIASKGMKLVSFDYSQIELRVLAEI 652 Query: 718 SRDKGLLTAFAEGKDIHRATAAEVFG-LPLETVTSEQRRSAKAINFGLIYGMSAFGLARQ 776 S+D+ L+ A+ D+H TA ++F E V+ QR AK INF ++YG + FGL+++ Sbjct: 653 SKDENLINAYKHNLDLHELTARKIFMLKDDEKVSKTQRNIAKVINFSVLYGKTPFGLSKE 712 Query: 777 LNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARR 836 L I +A+ Y++ YF+ YP V ++ +AK+ GYVET G R Y+ DI SSN + Sbjct: 713 LKITVSDAKLYINTYFKEYPKVRILLDDIIEKAKKDGYVETKFGTRRYVYDINSSNINIK 772 Query: 837 AAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAV 896 A+R A+N +QGTAA+IIK+ M + L + V+M++QVHDEL+FEV +D + Sbjct: 773 EQAKRMAVNTVIQGTAANIIKKVMKEIYDKLCND--NVKMLLQVHDELIFEVREDI--NI 828 Query: 897 AKQIHQLMENCTRL-DVPLLVEVGSGENWD 925 ++I +M+N DV L V G+NW Sbjct: 829 FEEIRDIMQNTIVFDDVVLKVNGSEGDNWA 858 >UniRef50_Q1AUF6 DNA polymerase I n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AUF6_RUBXD Length = 843 Score = 743 bits (1918), Expect = 0.0, Method: Composition-based stats. Identities = 304/924 (32%), Positives = 458/924 (49%), Gaps = 107/924 (11%) Query: 8 PLILVDGSSYLYRAYHAFP-PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 + L+DG S LYRA++A P + S+G PT A+YG +M+ L+ + VV+D Sbjct: 13 RVYLIDGYSLLYRAFYALPQSIATSSGLPTNALYGFTSMVLKLLDSDEELGIGVVWDGGL 72 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 FR E++ YK+ R MP++LR Q++ L +++AM +P++ V G EADDV+ T++R Sbjct: 73 PAFRTEVYPEYKAQRSAMPEELRVQLDHLDEILEAMNIPVVRVEGFEADDVLATVSRRLP 132 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELIIDFLAL 182 G + I TGD+D QLV + ++ T + G EV+ +YGV PE I D+ AL Sbjct: 133 -EGVELYIVTGDQDAMQLVDGRVRVLRTTRGVSETKVYGRREVMEEYGVSPEQIPDYKAL 191 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 +GD SD I G+ G K+ AA L Sbjct: 192 VGDPSD-------------------------------NIPGVRGIGPKSAAALLR----- 215 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGA 302 + + E L ++ E + +E G+ Sbjct: 216 -------------------------RFGSLEALYERLEEVEARGTRRKLEEGRENAFLSL 250 Query: 303 KPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLD 362 + A + V + + ++ +L ++ ++ PV Sbjct: 251 RLARMRFDAPVQFDPERLRFRGVAPGVRDVLLRRYEFRSLEPRIAGLPVSG------GGR 304 Query: 363 NISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK 422 + V + + VA + + L L + + K Sbjct: 305 PQPESAVRVVEGEVEPSLEPVAVAPAGDGRWCAAVADDEVRLAGGL---PERPLQVHDAK 361 Query: 423 YDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 G+ +RG FDT L Y+ G +D+D+LA + I+ E + Sbjct: 362 ---------GVGVRGAHFDTYLAGYLAKPGLGSYDLDALATE----RGISDVEASHADPV 408 Query: 483 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIER 542 + A DA++ + G ++ +E+PL VL+ +ER Sbjct: 409 VREAARRAALVRALAPRLDAEL-------------REMGLSRLYYEVELPLADVLAEMER 455 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 G+ +D + L E+ R+AELE+ E G FN+ S KQL +LFE+ G+ P+++T Sbjct: 456 VGMPVDARTLEEVGREIERRIAELEEAIFEDVGHPFNIGSPKQLSEVLFEELGLPPVRRT 515 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 G ST +VL++LAL++P+ + I+ +R LAKLK TY + L ++ + GR+HT+ +Q Sbjct: 516 KTG-YSTDAKVLQQLALEHPIAERIIAWRELAKLKGTYVEGLLKLV-GEDGRIHTTLNQT 573 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKG 722 TATGR+SS PNLQNIPVR E G RIR AF A ++V ADYSQIELRI+AH+SR+ Sbjct: 574 TTATGRISSDSPNLQNIPVRTETGMRIRDAFTASPGRLLVVADYSQIELRILAHMSREPA 633 Query: 723 LLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLN-IPR 781 L+ AF G+DIH TAAEVF + E+VT E RR AK +NFG++YG+S +GLA +L + Sbjct: 634 LVEAFKNGEDIHTRTAAEVFDVRPESVTPELRRRAKMVNFGILYGISGYGLATRLGNVHP 693 Query: 782 KEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAER 841 EA +Y+ YFER+P V E++ ++ A+A+E GY TL GRR Y+P++++ N R ER Sbjct: 694 AEADRYIQRYFERHPRVTEFIRKSLAEAEELGYATTLFGRRRYVPELRNKNKNVRKLGER 753 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIH 901 A NA +QG+AADIIK AM+ + L M+MQVHDELVF+V +D V+ VA Sbjct: 754 IAFNARVQGSAADIIKVAMVDLAPRLGP--LGADMLMQVHDELVFDVDRDRVEEVAALAA 811 Query: 902 QLMENCTRLDVPLLVEVGSGENWD 925 + M LD PL VEV +GE W Sbjct: 812 ERMVAAYDLDPPLEVEVKAGERWG 835 >UniRef50_UPI00016C3887 DNA polymerase I n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3887 Length = 824 Score = 733 bits (1893), Expect = 0.0, Method: Composition-based stats. Identities = 283/825 (34%), Positives = 417/825 (50%), Gaps = 70/825 (8%) Query: 9 LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKT 68 + L+D +++ ++ P++ G PT A++GV L +L + D + T Sbjct: 10 MYLLDAHGLIFQMFYGVGPMSAPDGRPTNAVFGVTRALMNLY-DRGADYLIATLDHEKPT 68 Query: 69 FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKA 128 FR E+ YK+HR P P DL Q + +++AM +P L G EADDV+ T++ +A Sbjct: 69 FRVEIDAAYKAHRDPPPPDLLLQEPMIQQVMEAMRVPFLIAPGYEADDVMATVSTQAAAR 128 Query: 129 GRPVLISTGDKDMAQLVTPNITLINTMTN-TILGPEEVVNKYGVPPELIIDFLALMGDSS 187 G V + T DKD QL+T + ++N + L V+ +GV P+ ++DF AL+GDS Sbjct: 129 GLDVFLCTSDKDCRQLITDKVKMLNLRKDYEALDAAGVLADWGVRPDQVVDFQALVGDSV 188 Query: 188 DNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL-- 245 D + GV GVG KTA LQ G LD L A ++ AG L+ L Sbjct: 189 DGVKGVAGVGPKTAAKWLQQFGTLDVLIANADQAAG-----GPKTRQALKDAVASGALAK 243 Query: 246 SYQLATIKTDVELELTCEQLEVQQPAAEELLGL---FKKYEFKRWTADVEAGKWLQAK-- 300 S +L + DV + E + + LL L F F Q Sbjct: 244 SKRLVCLDRDVPVAFDWEGWRRRDWDGQRLLELFHEFGFRGFAERVRKTLTRSGAQKNAD 303 Query: 301 -------------------------------------------------GAKPAAKPQET 311 P A P ET Sbjct: 304 ALATAGLNAPPPVADTVGRGVPGAKAVPAKKAKGKSQKPAGPGLFDLLMEEAPGAVPTET 363 Query: 312 SVADE-APEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVG 370 ++ AP + SY Y +I E + ++ +L + P F FD ET LD + +VG Sbjct: 364 GASEPTAPAPISDGWSYSGYESITTPERFEQFVGELAQQPAFVFDLETAGLDPVHDPIVG 423 Query: 371 LSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILAN 430 SF+ + G A Y+PV + ++ + L LKP+ E+ K N+K+D +LA Sbjct: 424 YSFSWQKGTAYYLPVRAPAGEP--VLNPDTVLAALKPVFENPAIEKRNHNIKFDLIVLAA 481 Query: 431 YGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIA 490 G+EL G+A D+M+ Y+L+ A H +D L L+H I+ +E+ G GK Q+T ++ Sbjct: 482 SGVELAGVAGDSMVAHYLLDPGARAHGLDDLTLDELRHTNISIKELIGTGKKQITMAEVP 541 Query: 491 LEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPK 550 + YA EDAD LQL P L G +++ +E+PL+ VL+ +E G+++D Sbjct: 542 VARVRDYACEDADAALQLAAAFEPRLDAA-GLRELYDTLEVPLIRVLAEMEHVGIRVDVP 600 Query: 551 VLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGA-PST 609 L ++ LA E H +AG FN+ S K+LQ ILF++ + K+T PST Sbjct: 601 FLVQLGVQMGEELAGYEGDIHALAGRAFNIGSLKELQKILFDELKLPVQKRTGIKNEPST 660 Query: 610 SEEVLEELAL-DYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGR 668 +E LE LA + LPK +L YR ++KLKSTY D LP + + K GRVHTS++QA TGR Sbjct: 661 DQESLERLAALGHELPKKLLAYRKVSKLKSTYVDVLPALAD-KNGRVHTSFNQASAETGR 719 Query: 669 LSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFA 728 LSS++PNLQN+P R E+G ++R+AFI + +V+V+ADYSQIELR++ H D L AFA Sbjct: 720 LSSSEPNLQNVPTRTEQGAQLRKAFIPRDGWVLVTADYSQIELRLLTHFCGDDTLRAAFA 779 Query: 729 EGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGL 773 E +D+H A AA++F +P VT QR AK +NFG++YGMSA GL Sbjct: 780 EDRDVHTAVAAQIFKVPEGEVTKAQRGVAKTVNFGVLYGMSATGL 824 >UniRef50_Q8I7W9 Mitochondrial DNA polymerase A n=2 Tax=Eukaryota RepID=Q8I7W9_DICDI Length = 1369 Score = 719 bits (1855), Expect = 0.0, Method: Composition-based stats. Identities = 272/1109 (24%), Positives = 460/1109 (41%), Gaps = 198/1109 (17%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKP-THAAVVFD- 63 + +L+DG+ Y+A P LTN G +YG + + +I + KP V FD Sbjct: 271 KKHTVLIDGTLMAYKANATTPSLTN-EGMNVNVLYGFMRSMLKVIDELKPIDSIVVCFDP 329 Query: 64 AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123 G +FR +L+ YKS+RPP P +L Q+ + + ++ + V G E DD++ T ++ Sbjct: 330 KGGSSFRRDLYPEYKSNRPPTPPELLQQLLLIPEVTDSINVAFTKVDGYECDDLLATYSK 389 Query: 124 EAEKAGR----------------------PVLISTGDKDMAQLVTPNITLINTMTNTILG 161 A + G V I T DKD+ QLV N+++ +T +++ Sbjct: 390 LATQEGNKFIEGNDQYDPTHPESNRFNGSQVTIVTDDKDIYQLVNDNVSVYSTRRGSMVD 449 Query: 162 PEEVVNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKI 221 + V++K+G P + F +L+GD DNIPG+P +GEKTA +++ G L+++ +++ Sbjct: 450 KQGVIDKFGFEPNKFVTFQSLIGDKVDNIPGIPRIGEKTATDIIKKFGNLNSIIENIDQL 509 Query: 222 AGLSFRGAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKK 281 + + + +SYQLA + +V + L + ++ + + K Sbjct: 510 PQ-------KFIEPIRSSIDQLRISYQLAKLNDNVSINLNLDDIKYKPIDRTKFYNFLDK 562 Query: 282 YEFKRWTADVEAGKWLQAKGAKPAAKP---------------------QETSVADEAPEV 320 Y F + VE L + + E DE Sbjct: 563 YNFTSIKSSVEKLNKLFSDNQEITTSTSTTNLETIKKNYSKVEFNYIDDENIKFDEISNE 622 Query: 321 TATVISYDNYVTILDEETLKAWIAKLEKAPV--FAFDTETDSLDNISANLVG------LS 372 + N + D ET + ++ L K A DTE +D + +G S Sbjct: 623 EINQLKPKNVTMVRDVETARMVVSILMKQKDRFHACDTEVIDIDLKKFSPIGHGKMICFS 682 Query: 373 FAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYG 432 P V + + ++D D I + L++ K EDE LKV N +DR I N+G Sbjct: 683 IYCGPQVKFHDGNSRVWVDVMDDIEGDEILQVFKEYFEDESILKVWHNYAFDRHIFYNHG 742 Query: 433 IELRGIAFDTMLESYILNSVA---GRHDMDSLAERWLKHKTITFEEIAG------KGKNQ 483 I ++G DT+ + + N+ G + +++L++ L + +++ G G+ Sbjct: 743 INVKGFGGDTLHMARLWNASRMNSGGYSLEALSKELLNKPKVPIKDLFGTRKIKADGEEG 802 Query: 484 LTFNQIALEE----------AGRYAAEDADVTLQLHLKMWPDLQKHKG-----PLNVFEN 528 + LE Y++ D+++T L + L+ + + + Sbjct: 803 KSIVIPPLERIQRDSKFILNWIEYSSLDSELTWLLRENIHIKLRDMEWNQGTTMWDFYYL 862 Query: 529 IEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIA------GEEFNLSS 582 + P +L+ +E+ G+K+D L + E+ + E K A E N S Sbjct: 863 MWRPFGHLLTEMEQRGLKVDIDYLKSLEEKAYTDMEENRKVFLNWAKTHSPDAENMNPVS 922 Query: 583 TKQLQTILFEKQGIKPLKK----------------------------------------- 601 Q+Q + F K K+ Sbjct: 923 DAQIQQLFFAPVQNKKTKESLPLEKDFECDNLDGTIEVGKTKPKKKKTFYLRGIGMESKS 982 Query: 602 -TPGGAPSTSEEVLEELALDYPL------------------------------------- 623 T G PS L ELA P+ Sbjct: 983 LTTNGWPSVDSSSLRELAGKNPIDGKYGSAYDFFVKSKNECYKDLPIEEREQMGREASIA 1042 Query: 624 PKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRN 683 +LE + L +T+ L + + R+HTS + T TGRLSS PNLQN P Sbjct: 1043 INALLELGSIGTLLNTFIIPLQKLAD-SNSRLHTSINV-NTETGRLSSKKPNLQNQPALE 1100 Query: 684 EEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFG 743 ++ +IR+AF ++ ADY Q+ELR++AH++ K ++TAF G D H TA ++ Sbjct: 1101 KDRYKIRKAFTCEPGNTLIVADYGQLELRLLAHITNCKSMITAFQVGGDFHSRTAMGMYP 1160 Query: 744 LPLET-----------------------VTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 E V + +RR AK +NF + YG +A GL++ + Sbjct: 1161 HVKEAIDRGEVLLEWDGEGEPPKPLLKNVYASERRKAKTLNFSIAYGKTAHGLSQDWGVT 1220 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 EA++ ++ ++E P VL + +T A + G+ TL GR LPDIK N + AE Sbjct: 1221 LNEAKETLNRWYEDRPEVLVWQRKTIETAHKYGWTRTLMGRYRQLPDIKG-NKGMKGHAE 1279 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI 900 RA+IN P+QG AADI+ +AM+ ++ + ++ ++IMQ+HDEL+ E + D + Sbjct: 1280 RASINTPLQGGAADIVMKAMLIIEDNKRLKELGFKLIMQIHDELILEGPEQHADEARSIM 1339 Query: 901 HQLMENCT--RLDVPLLVEVGSGENWDQA 927 LM N L + L+V+ + W A Sbjct: 1340 MNLMSNPLTTPLLIDLVVDCRYAKTWYDA 1368 >UniRef50_C7N982 DNA polymerase I n=6 Tax=Leptotrichia RepID=C7N982_LEPBD Length = 1046 Score = 716 bits (1849), Expect = 0.0, Method: Composition-based stats. Identities = 291/1050 (27%), Positives = 480/1050 (45%), Gaps = 139/1050 (13%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 +++D S+ +YR++ A + NS+G TGA +G +N L S+I +++P + D K Sbjct: 2 KRAVILDTSAIMYRSHFALMGMRNSSGMSTGATFGFINTLESVIREFRPDYLVACLDVKR 61 Query: 67 KT-FRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 R E YK+HR MP++L QI+ + ++ +P +G EADDVI T A + Sbjct: 62 DELERTGELETYKAHRESMPEELVMQIDTIMKVLDGYRIPKYKKAGQEADDVIATFATKF 121 Query: 126 E---KAGRPVLISTGDKDMAQLVTPNITLINTMTN-------TILGPEEVVNKYGVPPEL 175 V + TGDKD+ QLV I + I E+VV GV P+ Sbjct: 122 SNDADEQIEVFVITGDKDLTQLVDGKINIALLGKGDKNSAFKHIKTDEDVVEYLGVTPDK 181 Query: 176 IIDFLALMGDSSDNIPGVPGVGE-------------------------KTAQALL----- 205 I D LMGD SD IPGV G+G K + LL Sbjct: 182 IPDLFGLMGDKSDGIPGVAGIGPKNGVKLITTYGNLEGIYENIDEIKGKQKEKLLTDKEN 241 Query: 206 ---------------------------QGLGGLDTLYAEPE--------KIAGLSFRGAK 230 + L LY E + F Sbjct: 242 AFISRELATVKRELDVEYDKNKLKFEEKDFDSLLKLYEELNFKRFSKAVEEEKERFLQNG 301 Query: 231 TMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTAD 290 E+ K V + ++ K + E E++E Q+ ++ +F + Sbjct: 302 NQKELTEEEKLVLEKNKKITEEKLEKER-FEREKIEKQELEYDKENPIFDGISHFYEHVE 360 Query: 291 VEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAP 350 E + K + +E ++ EA + I+ +N T ++ + + Sbjct: 361 YEHNSEIDKKIDEIQVLKEELAIEYEAQKKKQEEIALENQKTEKTKKIKDEKVYFEKNYG 420 Query: 351 VF-------AFDTETDSLDNISANLVGLSFAIE----------------------PGVAA 381 + + D I N++GLS E G Sbjct: 421 KVVSWNDAYSVIEKMDKKVAIFENMLGLSICDEKMNIVLLDSELKNILQNKNYEKSGAEV 480 Query: 382 YIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGIL-----------AN 430 I + + ++ ++ +E + LL +++ + N+K Sbjct: 481 QINLFSLGENTAEKEDNKKNIENIYKLLSEKEI--IAYNVKEYMKSGESEYFGYSVGGKT 538 Query: 431 YGIELRGI------AFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQL 484 YGI FD +L Y+L +++ + + TFEE K + + Sbjct: 539 YGINEERFGIKCTEYFDILLARYVL-GTESLQEIEEIILDEFGVEIATFEEQFKKERRKK 597 Query: 485 TFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNG 544 F+ ++ + + ++ +L + L +++ LN+F+ +E L+PVL+++E G Sbjct: 598 DFSDVSDDVVCEFLSKRTFFIYKLEIIFRNRL-QNEQFLNIFDKLESRLIPVLAQMEETG 656 Query: 545 VKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPG 604 +KID K EL ++ L+ +++A EFN+ S +QL +LFEK I KKT Sbjct: 657 IKIDKKYFSEFQNELEEKINMLQSDIYKLADGEFNIDSPQQLGEVLFEKLQIPSGKKTKT 716 Query: 605 GAPSTSEEVLEELALDYPLP-------KVILEYRGLAKLKSTYTDKLPLMINPKTGRVHT 657 G ST+ EVLE +A + L K +LEYR KL STY + +P + + + R+HT Sbjct: 717 G-YSTNVEVLEMIANNRELTEDKRMIGKKLLEYRAYKKLLSTYIEPIPKLADKEE-RIHT 774 Query: 658 SYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHL 717 +++Q T+TGRLSS +PNLQNIPVR ++G RIR F++ E + ++S DYSQIELR++A L Sbjct: 775 TFNQNGTSTGRLSSANPNLQNIPVRTDDGIRIRTGFVSKEGHSLISFDYSQIELRVLAEL 834 Query: 718 SRDKGLLTAFAEGKDIHRATAAEVFGL-PLETVTSEQRRSAKAINFGLIYGMSAFGLARQ 776 S+D+ L+ A+ + +D+H TA ++F + ++ +R AK INF ++YG + FGL+++ Sbjct: 835 SKDRHLVQAYQDNQDLHNLTARKIFFKTEEDEISRHERSIAKVINFSILYGKTPFGLSKE 894 Query: 777 LNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARR 836 L I +EA +Y+ YFE YP V ++++ AK G+VET G R Y+ I ++N + Sbjct: 895 LGITVQEASQYITTYFEEYPRVRKFLDIVTETAKLHGFVETFYGTRRYISGINATNKNVQ 954 Query: 837 AAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAV 896 A A R A+N +QGTAA+IIK+ MI + + ++ ++M++QVHDEL+FEV + Sbjct: 955 AQAVRMAVNTVVQGTAANIIKKVMIELHEEFKNDE-NIKMLLQVHDELIFEVRDEFAKEY 1013 Query: 897 AKQIHQLMENCTRL-DVPLLVEVGSGENWD 925 ++I ++MEN + VPL +NW Sbjct: 1014 MEKIEKIMENTVKFKKVPLKANGSVAKNWG 1043 >UniRef50_Q9ZJE9 DNA polymerase I n=17 Tax=Helicobacter RepID=DPO1_HELPJ Length = 897 Score = 706 bits (1823), Expect = 0.0, Method: Composition-based stats. Identities = 281/935 (30%), Positives = 451/935 (48%), Gaps = 54/935 (5%) Query: 2 VQIPQNPLILVDGSSYLYRAYH---AFPPLTNSAGEPTGAMYGVLNMLRSLIMQYK--PT 56 I + L L+D +YL+R+Y+ PLTN G PTG + G++ M++ K P Sbjct: 4 PVIKEGTLALIDTFAYLFRSYYMSAKNKPLTNDKGFPTGLLTGLVGMVKKFYKDRKNMP- 62 Query: 57 HAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADD 116 +++ KT R E YK +R P ++ QI ++ MG + V G EADD Sbjct: 63 FIVFALESQTKTKRAEKLGEYKQNRKDAPKEMLLQIPIALEWLQKMGFTCVEVGGFEADD 122 Query: 117 VIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELI 176 VI +LA + I + DKD QL++ I L + T + ++ V KYG+ P Sbjct: 123 VIASLATLSP---YKTRIYSKDKDFNQLLSDKIALFDGKTEFL--AKDCVEKYGILPSQF 177 Query: 177 IDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKL 236 D+ ++GDSSDN GV G+G K A+ LLQ LG L+ +Y + L + M L Sbjct: 178 TDYQGIVGDSSDNYKGVKGIGSKNAKELLQRLGSLEKIYENLDLAKNL---LSPKMYQAL 234 Query: 237 EQNKEVAYLSYQLATIKTDVELELTCEQLEVQ-QPAAEELLGLFKKYEFKRWTADVEAGK 295 Q+K A+LS +LAT++ E + ++ K+Y F D+E Sbjct: 235 IQDKGSAFLSKELATLERGCIKEFDFLSCAFPSENPLLKIKDELKEYGFISTLRDLENSP 294 Query: 296 WLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFD 355 ++ + P + + + + + E L ++ KLE F Sbjct: 295 FIVENVPILNSTPILDNTPALDNAPKKSRM-----IVLESAEPLSMFLEKLENPNARVFM 349 Query: 356 TETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKAL 415 D ++ L+F ++ ++P+ S E +L+ Sbjct: 350 RLVLDKD---KKILALAFLLQD-QGYFLPLEEALFSPF---SLEFLQNAFSQMLQHACI- 401 Query: 416 KVGQNLKYDRGILA-NYGIELRGI-AFDTMLESYILNSVAGRHDMDSLAERWLKHKTITF 473 +G +LK L Y + L I DT + +++ N + D + + +LK I Sbjct: 402 -IGHDLKPLLSFLKAKYQVPLENIRIQDTQILAFLKNPE--KVGFDEVLKEYLKEDLIPH 458 Query: 474 EEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPL 533 E+I F + E + + + +L + L + +IE P Sbjct: 459 EKI-------KDFKTKSKAEKSELLSMELNALKRLCEYFE-KGGLEEDLLTLARDIETPF 510 Query: 534 VPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEK 593 V VL +E G KID +E L LE++ ++ G +FNL+S KQL +L++K Sbjct: 511 VKVLMGMEFQGFKIDAPYFKRLEQEFKNELNVLERQILDLIGVDFNLNSPKQLGEVLYDK 570 Query: 594 QGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTG 653 G+ K ST E+ L ++ +P +ILEYR L KL +TYT L + + K Sbjct: 571 LGLPKNKS-----HSTDEKNLLKILDKHPSIPLILEYRELNKLFNTYTTPLLRLKD-KDD 624 Query: 654 RVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSADYSQIELR 712 ++HT++ Q TATGRLSS PNLQNIPVR+ +G IR+ FIA ++Y ++ DYSQIELR Sbjct: 625 KIHTTFIQTGTATGRLSSHSPNLQNIPVRSPKGLLIRKGFIASSKEYCLLGVDYSQIELR 684 Query: 713 IMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFG 772 ++AH S+DK L+ AF +G+DIH T+ +FG E + E+R AK+INFGL+YGM + Sbjct: 685 LLAHFSQDKDLMEAFLKGRDIHLETSKALFG---EDLAKEKRSIAKSINFGLVYGMGSKK 741 Query: 773 LARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSN 832 L+ L+IP EA+ Y++ YF+R+P + +Y+ R + + TL GR D N Sbjct: 742 LSETLSIPLSEAKSYIEAYFKRFPSIKDYLNGMREEILKTSKAFTLLGRYRVF-DFTGVN 800 Query: 833 GARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDD 892 + R +NA QG+A+D++K M+ V + P VR+++QVHDEL+FE+ + + Sbjct: 801 DYVKGNYLREGVNAIFQGSASDLLKLGMLKVSERFKN-NPSVRLLLQVHDELIFEIEEKN 859 Query: 893 VDAVAKQIHQLM-ENCTRLDVPLLVEVGSGENWDQ 926 + ++I +++ + L VPL + W++ Sbjct: 860 APELQQEIQRILNDEVYPLRVPLETSAFIAKRWNE 894 >UniRef50_Q057H2 5'-3' exonuclease domain of DNA polymerase I n=2 Tax=cellular organisms RepID=Q057H2_BUCCC Length = 886 Score = 684 bits (1766), Expect = 0.0, Method: Composition-based stats. Identities = 311/922 (33%), Positives = 501/922 (54%), Gaps = 42/922 (4%) Query: 6 QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 + +I++DG LY+ Y +F L N G TG +YG + +L LI ++ P +VFD Sbjct: 2 KKKIIIIDGHYCLYQNYFSFIKLKNKNGSSTGVLYGYIRLLNKLIEKFNPKKIIIVFDTP 61 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 KT R +LF YK +R MP++L+ QI PL ++KA+ + ++++ +EADD+IGT++R Sbjct: 62 KKTNRHKLFTKYKKNRISMPNELKKQINPLKKIIKALNITIISIKKIEADDIIGTISRIF 121 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185 K + I + DKDM QL+ N+ +I +L ++ KYGV P+ I DFL L+GD Sbjct: 122 TKKKYYIFIYSADKDMTQLIKKNVFVIPGSIKKVLNKNDIFKKYGVYPKSIADFLCLVGD 181 Query: 186 SSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYL 245 SDNI GV G+G+KTA+ LLQ + +Y EKI+ L + K + LE+NK+ +L Sbjct: 182 FSDNIRGVLGIGKKTAKILLQSFSSIKKIYKNIEKISFLPIKNIKNIKKNLEKNKKNTFL 241 Query: 246 SYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPA 305 SYQL I ++EL ++ E + F+ Y+ + + + Sbjct: 242 SYQLTKINKNIELPKIHSIIKKNTLNIEFIKKKFEFYQLNEYLKKINDNTFSILNIYNKK 301 Query: 306 AKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNIS 365 K ++ E + + + + K EK F Sbjct: 302 KKMKKKHKYIEIVKKKILLKLINKIIKKKIFAISIYEKKKNEKKKKFY------------ 349 Query: 366 ANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDR 425 LS IE + IS ++ L+ L+P+LE+ K K+G+NLK Sbjct: 350 -----LSITIEKHETWWF-----IYKKKKNISIKKILKYLRPILENNKYYKIGKNLKNVF 399 Query: 426 GILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLT 485 I Y I RGI FDT ++ + K ++ Sbjct: 400 HIFQEYNILFRGIHFDT-----------------TIINYYYKLNYKKNKKYQNLIYKYKK 442 Query: 486 FNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGV 545 + + +++ ++L+++ K F+ I+M L+P+L+ IE NGV Sbjct: 443 NKKEKSFKRKFIIMQESLISLKIY--FLFKKNIKKKKRENFQLIDMSLLPILAEIENNGV 500 Query: 546 KIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGG 605 I K+L + L +L+KK +I E+FN++S+KQLQ ILF+K + + KT G Sbjct: 501 LIKKKILKKQKKNHEKTLKKLKKKIFKITKEKFNINSSKQLQNILFKKFNLPKIYKTKLG 560 Query: 606 APSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTA 665 ST+E VL++L+ + LPK+IL++R + K+ +TY L IN KT R+HT+Y+Q T+ Sbjct: 561 NISTNEIVLKKLSKIHILPKIILQFRLIKKIINTYLRNLIKSINNKTNRIHTTYNQINTS 620 Query: 666 TGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLT 725 TGRLSS +PNLQNIP++ + GR++R AFI + +++++ADYS IELRI+AH S+DK L+ Sbjct: 621 TGRLSSKNPNLQNIPIKTKIGRKLRIAFITKKKWLLLTADYSHIELRIIAHYSKDKNLIK 680 Query: 726 AFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQ 785 + KDIH +TA+ +F PLE + R AK INF ++YG+S FGL+++LNI K+++ Sbjct: 681 DLLKNKDIHISTASHIFNKPLEKIKKYHRNIAKTINFSILYGISPFGLSKKLNISIKKSK 740 Query: 786 KYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAIN 845 + YF +Y + +++ T AK++GY++TL R+LY+P+I S N + +A+R IN Sbjct: 741 NLIYRYFLKYNKIKRFIKNTYKTAKKRGYIKTLFKRKLYIPNINSKNIYLKNSAKRFCIN 800 Query: 846 APMQGTAADIIKRAMIAVDAWLQAEQPR-VRMIMQVHDELVFEVHKDDVDAVAKQIHQLM 904 +Q TA+DIIK++MI + + + P+ +++IMQ+HDEL+FE+ + D + I ++M Sbjct: 801 LMIQNTASDIIKKSMITLHHLFKKKFPKDIKIIMQIHDELIFEIKEKKKDKIIDVIKKIM 860 Query: 905 ENCTRLDVPLLVEVGSGENWDQ 926 EN T+L +PL + G+NW + Sbjct: 861 ENNTKLIIPLYITTKIGKNWKE 882 >UniRef50_A6DML3 DNA-directed DNA polymerase, DNA polimerase I protein n=3 Tax=Bacteria RepID=A6DML3_9BACT Length = 1036 Score = 684 bits (1765), Expect = 0.0, Method: Composition-based stats. Identities = 273/697 (39%), Positives = 412/697 (59%), Gaps = 14/697 (2%) Query: 236 LEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGK 295 L +N E +++ + A K D+ L + + ++ L ++ W D+E G Sbjct: 348 LGKNSEEIFIALKNAFNKCDLTLASENHTVIPEDLESKRKCTLTWEWLAATWLHDIELGL 407 Query: 296 WLQAKGAKPAAKPQETSVADEAPEVTATVISY----DNYVTILDEETLKAWIAKLEKAP- 350 A P + A A + + Y +Y + LKA + ++ KA Sbjct: 408 EQIASNHLPLIQEHLFLNAKFAELLATATVEYNSQRHDYNIVKSIPELKAVLDEITKAKL 467 Query: 351 VFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLE 410 +FDTET LD SA +VGL AI A YIP D + +E L+ +KP Sbjct: 468 PVSFDTETTGLDVRSATIVGLGLAIRDHHAWYIPFNSD-------LDKEEILKEIKPFFA 520 Query: 411 DEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKT 470 D QN K+D +L GIE++ I FDT++ S+I N HD+DSL+ +L ++ Sbjct: 521 DSSLKFFAQNAKFDLQMLHYAGIEVKNIDFDTLVASFICNPSRQFHDLDSLSLHYLNYRK 580 Query: 471 ITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIE 530 I+ E + GKGK Q++ + +E Y ED D+TL+L ++ +L + + N+F+ ++ Sbjct: 581 ISTESLIGKGKKQISMADLPVERVATYCCEDVDITLRLRNELEAELHR-RDLRNLFDEMD 639 Query: 531 MPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTIL 590 +PL+PVLS++E NG+ I+ L S + + L + E++ H +AG EFN++S KQ+ +L Sbjct: 640 IPLIPVLSKMENNGISINLGTLEKISSDFSAELKKCEEQIHALAGHEFNINSPKQVGVVL 699 Query: 591 FEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINP 650 FE+ G+K KKT G STS EVLE LA + + + IL +R L+KL STY D LP ++ Sbjct: 700 FEEMGLKAGKKTATG-YSTSAEVLENLAAESEIVRAILRHRTLSKLISTYADALPKEVSE 758 Query: 651 KTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIE 710 R+HT + Q ATGRL+ST PNLQNIP R EG+ IR AF APE + +S DYSQIE Sbjct: 759 LDQRIHTRFSQTTAATGRLASTQPNLQNIPTRTAEGKSIRSAFQAPEGHHFISCDYSQIE 818 Query: 711 LRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSA 770 LRIMA LS+D GLL AF D+H TA+ VF L VT +QR +AKA+NFG+++G Sbjct: 819 LRIMAELSQDPGLLEAFNNDFDVHTHTASLVFETELSEVTKQQRYAAKAVNFGIMFGQGP 878 Query: 771 FGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKS 830 +GLA+++ + EA++++ YF+RYP V ++M + A+++GY ET GRR YLP++ S Sbjct: 879 YGLAKEIGVSADEAKQFISNYFKRYPDVQKFMAKCVEDARDKGYSETSFGRRRYLPEMLS 938 Query: 831 SNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHK 890 SNG R+ AER ++N+P+QGTAADIIK AMI V L+ Q + +M++Q+HDEL+FEV Sbjct: 939 SNGRIRSGAERISVNSPIQGTAADIIKIAMIKVADELEKRQLKSKMLLQIHDELLFEVPD 998 Query: 891 DDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 D+++ + + I Q+M + ++ VPL V+ + ++WDQ Sbjct: 999 DELEIMKELIPQIMTDIPQIKVPLKVDCAAAKSWDQC 1035 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 100/335 (29%), Positives = 179/335 (53%), Gaps = 8/335 (2%) Query: 9 LILVDGSSYLYRAYHAFP-PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGK 67 + ++D +Y++RA++ + + G PT A++G +N ++I + P+H VFDA + Sbjct: 7 IFVIDSMAYIFRAFYGIRANMHSKDGLPTNALFGFINSFENIIRDFNPSHVVAVFDAGSE 66 Query: 68 TFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127 TFR+E++ YK++R P++L+ Q + + + G+PLL G EADD+I T+A++A Sbjct: 67 TFRNEMYSEYKANRKECPEELKPQFDLVKEYIALRGIPLLIQKGFEADDIIATVAKQATG 126 Query: 128 AGRPVLISTGDKDMAQLVTPNITLINTMTNTI-LGPEEVVNKYGVPPELIIDFLALMGDS 186 + +I +GDKD+ QLV + + +T N + + E+VV GV P+ I+D+L++ GDS Sbjct: 127 SHIKTVICSGDKDLMQLVNDDTLICHTHKNNLMIDAEKVVEIMGVRPDQIVDYLSICGDS 186 Query: 187 SDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLS 246 +DNIPG+PG+G K A LL L+T+ A +KI G K + + + ++A LS Sbjct: 187 ADNIPGLPGIGPKGAAKLLAEFDNLETILASHDKIKG------KKQSETIREKADLATLS 240 Query: 247 YQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAA 306 L ++ ++ L+ + E+L QP + L +++ F R+ D+ K +KP Sbjct: 241 KSLVILQDEMTLDKSYEELVPSQPDFDGLADFYERMGFARFLRDLPNIKASYEGNSKPTL 300 Query: 307 KPQETSVADEAPEVTATVISYDNYVTILDEETLKA 341 K +S V + + ++ Sbjct: 301 KQSLSSGGPVTLRVETFAPRPFQHEILKLNAEFES 335 >UniRef50_D2QFD0 DNA polymerase I n=3 Tax=Bacteria RepID=D2QFD0_9SPHI Length = 1024 Score = 679 bits (1753), Expect = 0.0, Method: Composition-based stats. Identities = 276/644 (42%), Positives = 404/644 (62%), Gaps = 11/644 (1%) Query: 288 TADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLE 347 + A A P ++ + +Y + E + + L Sbjct: 389 DDKLGAEVSETDAPAYLDVYPDYEIDENQPERRKTILSVKHDYRLVDTAELRASLVHYLS 448 Query: 348 KAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKP 407 + FD+ET ++D + A+LVGLSFA G A Y+PV D +A + ++ KP Sbjct: 449 QQESLCFDSETTAIDPVEADLVGLSFAYRAGEAFYVPVPADRAEA------QAIVDQFKP 502 Query: 408 LLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLK 467 + E+ KVGQNLKYD +L YG+E++G FDTM+ Y++ RH+MD +A +L Sbjct: 503 VFENPTIEKVGQNLKYDLLMLKKYGVEVQGKLFDTMIAHYLIEP-EMRHNMDMMAMTYLN 561 Query: 468 HKTITFEEIAGK-GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVF 526 + + E + GK GK QLT + +++ YA EDAD+TLQL P L+K +F Sbjct: 562 YSPVEIEALIGKKGKGQLTMRDVDIQKVVDYAGEDADITLQLKHAFAPRLEK-DNLHKLF 620 Query: 527 ENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQL 586 + +EMPLV VL+ +E G+KID L S L + + +++++ EIAGE FN+ S KQL Sbjct: 621 DQVEMPLVQVLTDLELEGIKIDTNALSELSATLEVDMRQVQQEIFEIAGESFNIGSPKQL 680 Query: 587 QTILFEKQG-IKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLP 645 +LF+K K KKT G +T EE+L +L ++ + + IL+YR L KLK+TY D LP Sbjct: 681 GEVLFDKLKLDKNAKKTKTGQYATGEEILSKLEAEHEIARKILDYRELIKLKNTYVDALP 740 Query: 646 LMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAP-EDYVIVSA 704 L+I+ +TGR+HTS++QAV ATGRLSST+PNLQNIP+R G+ IR+AF+ ++VI+SA Sbjct: 741 LLISKRTGRIHTSFNQAVAATGRLSSTNPNLQNIPIRTPRGQEIRKAFVPRGPEFVIMSA 800 Query: 705 DYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGL 764 DYSQIELRIMA S D+ +L AF G DIH TA++VF + L+ VTS+ RR AK INFG+ Sbjct: 801 DYSQIELRIMAAFSGDQTMLEAFNNGVDIHTQTASKVFHVGLDEVTSDMRRKAKTINFGI 860 Query: 765 IYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLY 824 IYG+S+FGLA++L IPRKEA + ++ YF +P V +Y+++ +A+ GY ET+ GRR Y Sbjct: 861 IYGISSFGLAQRLKIPRKEAGQIIEEYFAGFPAVKDYIDQCIEKARGFGYAETILGRRRY 920 Query: 825 LPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDEL 884 L DI S N R AER A+NAP+QG+AAD++K AMI + ++QAE+ + +MI+ VHDEL Sbjct: 921 LRDINSRNQTDRMFAERNAVNAPIQGSAADMLKIAMIQIHEFMQAERLKSKMILTVHDEL 980 Query: 885 VFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928 VF+ H+D++D + ++ ++M+N + V + +G+GENW AH Sbjct: 981 VFDAHRDEIDLLRVRVDEIMKNAIPMGVKMETGIGTGENWLLAH 1024 Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats. Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 14/311 (4%) Query: 5 PQNPLILVDGSSYLYRAYHAFP--PLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 P L L+D + +YRA+ AF P +S G T A++G +N + ++ + KPTH V F Sbjct: 4 PTKKLFLLDALALIYRAHFAFSKSPRISSRGINTSAVFGFMNAMIEVLTKEKPTHIGVAF 63 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 D+ KTFR E F YK++R P+D+ + + +V+AM +P+L + G EADD+IGT+A Sbjct: 64 DSAKKTFRHESFPMYKANRQSQPEDISVAMPYIKQIVEAMHIPMLILDGYEADDIIGTIA 123 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINT----MTNTILGPEEVVNKYGVPP-ELII 177 ++A A V + T DKD QLV +I + LG EV+ ++ + E + Sbjct: 124 KKAALADFEVYMMTPDKDYGQLVEEHIHIYKPAFMGKPAEKLGVTEVLERWQIERIEQVT 183 Query: 178 DFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLE 237 D L LMGDS DNIPG+PG+GEKTAQ L+ G ++ L A +++ G + + Sbjct: 184 DMLGLMGDSVDNIPGIPGIGEKTAQKLIADFGSVENLIARADELKG-------KLKENVV 236 Query: 238 QNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWL 297 + +S +LATI DV + E L + L L + EF++ + G + Sbjct: 237 NFAQQGLMSKELATIHLDVPVPFDEEHLRHTEYDKPRLAALLDELEFRQMKTRLLGGSYD 296 Query: 298 QAKGAKPAAKP 308 + P Sbjct: 297 EKPLPTAFQAP 307 >UniRef50_C1SHV2 DNA polymerase I n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHV2_9BACT Length = 798 Score = 662 bits (1707), Expect = 0.0, Method: Composition-based stats. Identities = 279/921 (30%), Positives = 428/921 (46%), Gaps = 131/921 (14%) Query: 10 ILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKTF 69 I++DGS +R YH PPLTNSAG PT ++GV+ + +LI +Y + AVVFDAKGK Sbjct: 3 IVIDGSYIAFRTYHKSPPLTNSAGVPTSVIHGVMQSIITLINKYGRENIAVVFDAKGKNR 62 Query: 70 RDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKAG 129 R E+ YK+ R P+DL Q + ++ +G+ V G E DD++ T+A Sbjct: 63 RHEIHPEYKATRDATPEDLGLQFGIMDELIPLLGVAYYKVDGYEGDDIMATIA---AHTK 119 Query: 130 RPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSDN 189 V + T DKD+ Q+V + + ++ G + V+ K+GVPPE + + LAL GD++DN Sbjct: 120 DDVGMLTKDKDIYQIVDDRVKIYDSQKGEFFGRDMVIEKFGVPPEKVRELLALAGDTADN 179 Query: 190 IPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQL 249 IPGV GVG KTA LL G LD +Y E + G + KL NK+ AYLSY L Sbjct: 180 IPGVAGVGVKTAAKLLNEHGSLDGIYENIESVKG-------KLKDKLIDNKDSAYLSYDL 232 Query: 250 ATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAKPQ 309 + D+ + ++ ++L + E K + + A + +P Sbjct: 233 VGL--DILESIPDVEIVKDD---KKLSEKLTELELKTIQSKLFADSDSED------VQPD 281 Query: 310 ETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLV 369 +V T + D + + D E + K+ F +D + L+ Sbjct: 282 VKAVEAGDVSDVHTAVFLDGKIYVTDGEKYCEYDGHNLKSAQFFYDIKGI------YRLI 335 Query: 370 GLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILA 429 G E AY +L+ PD ++ + + + ++ L Sbjct: 336 G-----ERYEEAYDVFLMSWLNDPDSGGITKSKAENIEQF----IGNIVVHAQEEKDKLK 386 Query: 430 NYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQI 489 G L E +L + + N + F++ Sbjct: 387 ANG----------------------------LLEVYLGMELPVAYCLGKMENNGIGFDK- 417 Query: 490 ALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVF----ENIEMPLVPVLSRIERNGV 545 DV ++ K+ ++ + + F N+ P + E GV Sbjct: 418 -------------DVMAKVADKLQDEVAEISEKIKTFVGYDINLNSPKQLQVFLFEELGV 464 Query: 546 KIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGG 605 + L + L N L+ Sbjct: 465 ----EGLKKTKTGFSTDEESLRAMI------PMNP---------LYAH------------ 493 Query: 606 APSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTA 665 VLE++ + L K++ STY L + GR+H+S+ Q TA Sbjct: 494 -------VLEDILVYRELAKLL----------STYALPLKDYVLA-DGRIHSSFRQTGTA 535 Query: 666 TGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLT 725 TGRLSS +PN+QNIP++ + G ++R+AFI E Y VS DYSQIELRI+AHL+ D+ L Sbjct: 536 TGRLSSVNPNMQNIPMKGKWGVKLREAFIPREGYSFVSFDYSQIELRILAHLTGDEHLKE 595 Query: 726 AFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQ 785 A+ +DIH TA+ +FG+ E V S RR AKA+NFG++YG+S FGL+R + +KEA+ Sbjct: 596 AYRNNEDIHTKTASGIFGVAPEKVDSGMRRLAKAVNFGILYGLSPFGLSRDTGVSQKEAK 655 Query: 786 KYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAIN 845 K+++ YF YP V ++E+ + KE+GY ETL GR+ ++ +I+S N ER A N Sbjct: 656 KFIEKYFATYPKVKGFIEKIAKETKEKGYAETLAGRKRFIREIRSKNRTVAMRGERIATN 715 Query: 846 APMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLME 905 PMQG+AADIIK AM+ A L ++ +++QVHDELVFEV D+D + ++ +ME Sbjct: 716 VPMQGSAADIIKLAMVECQAVLDDKEYDALVVLQVHDELVFEVLDKDIDEFSDRVRSIME 775 Query: 906 NCTRLDVPLLVEVGSGENWDQ 926 LDVPL+V +G+N + Sbjct: 776 GVMELDVPLVVNGAAGKNLGE 796 >UniRef50_D1PTJ0 DNA-directed DNA polymerase I (Fragment) n=1 Tax=Prevotella bergensis DSM 17361 RepID=D1PTJ0_9BACT Length = 661 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 264/675 (39%), Positives = 374/675 (55%), Gaps = 29/675 (4%) Query: 8 PLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65 L L+D + ++R+Y+AF P NS G T A+ G N L +I + PTH V FD Sbjct: 3 KLFLLDAYAIIFRSYYAFIKRPTINSKGLNTSAILGFCNTLNEIIEKENPTHIGVAFDY- 61 Query: 66 GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125 GKTFR E F YK+ R P+D++ + + ++KAM +P+L V+G EADDVIGTLA +A Sbjct: 62 GKTFRHEAFPPYKAQREATPEDIKLSVPHIQDILKAMHIPILQVNGFEADDVIGTLATQA 121 Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILG---PEEVVNKYGV-PPELIIDFLA 181 + G + T DKD QL+ ++ + +E+ KYG+ +ID LA Sbjct: 122 AEKGIETYMLTPDKDYGQLIRQHVYMFRPRHGGGYDKIGEKEIQAKYGIASAAQVIDLLA 181 Query: 182 LMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKE 241 LMGDSSDN PG PGVGEKTA L+ G + L +++ G M K+E + Sbjct: 182 LMGDSSDNYPGCPGVGEKTAVKLIHEFGTCENLIENSDQLKG-------KMREKVENAVD 234 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 +S LATI+TDV +EL ++L++ P EL +F + EF+R + Sbjct: 235 DIKMSKFLATIRTDVPIELNLDELKMTSPDEAELHKIFTELEFRRLAKKFLNKGEEKITS 294 Query: 302 AKPAAKPQETSVADEAPEVTATVIS-----YDNYVTILDEETLKAWIAKLEKAPVFAFDT 356 E + E + +Y I ++E + L + + DT Sbjct: 295 DNLQLNLFEENPTKTTSEPKFSTFESLKTTSHHYKLIDNQEEARKLCDFLRTNKILSLDT 354 Query: 357 ETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALK 416 ET S + A LVGLSF+++ A Y+ + D +A + + KPL ED + LK Sbjct: 355 ETTSTSPMEAELVGLSFSVKEKEAFYVAIPKDREEALQ------YVNIFKPLYEDPEILK 408 Query: 417 VGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEI 476 VGQN+KYD +L NYG++++G FDTML Y++ RH+MD +AE L ++T+ EE+ Sbjct: 409 VGQNIKYDYVVLRNYGVDIQGKMFDTMLAHYLIQPEL-RHNMDYMAETLLHYQTMHIEEL 467 Query: 477 AG-KGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVP 535 G KGK Q ++ EE YAAEDAD+TL+L + P L K G ++F +IEMPLV Sbjct: 468 IGPKGKGQKNMRDLSPEEIYEYAAEDADITLRLKNVLEPQL-KEVGAKSLFWDIEMPLVK 526 Query: 536 VLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG 595 VL+ +E NGV +D + L+ T R+ + E+ A E+AGEEFN+SS KQ+ ILF K Sbjct: 527 VLADMELNGVLLDTESLNEIERTFTERMQQYERHAFELAGEEFNISSPKQVGEILFGKMK 586 Query: 596 IK-PLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGR 654 I KKT G TSEEVL +L P+ + IL YRG+ KL TY + LP +INP+TG Sbjct: 587 IVDKPKKTKTGQFVTSEEVLLQLKDKAPIVEDILNYRGMKKLLGTYVEALPKLINPRTGH 646 Query: 655 VHTSYHQAVTATGRL 669 +HTS++QAVTATGRL Sbjct: 647 IHTSFNQAVTATGRL 661 >UniRef50_C1XI40 DNA polymerase I n=24 Tax=Bacteria RepID=C1XI40_MEIRU Length = 1273 Score = 621 bits (1602), Expect = e-176, Method: Composition-based stats. Identities = 258/758 (34%), Positives = 362/758 (47%), Gaps = 99/758 (13%) Query: 7 NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKG 66 + + LVDG YR+Y AF L S GEPT A++G L L L+ + VVFD Sbjct: 20 DRIWLVDGHHLAYRSYFAFEKLATSRGEPTQAIFGFLRTLLKLLKEDG-DCVIVVFDPPT 78 Query: 67 KTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAE 126 +TFR + FE YK+ R PDD Q+E + +V MGL L V G EADDVIGTLA++AE Sbjct: 79 RTFRHDAFEEYKAGRAATPDDFHPQLEKIKELVDLMGLQRLEVPGYEADDVIGTLAKKAE 138 Query: 127 KAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDS 186 + G PV I TGD+D QL++ + ++ ++ P+ V KYGV +D+ +L+GDS Sbjct: 139 QEGYPVRILTGDRDSFQLLSEAVQVMLP-DGRLMHPQAVQEKYGVSVAQWVDYRSLVGDS 197 Query: 187 SDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLS 246 SDN+PG G+GEKTA LLQ G L+ LYA E ++ + A LE+ S Sbjct: 198 SDNLPGAKGIGEKTAAKLLQEWGSLEGLYANLEALS-------PKIRASLEE-------S 243 Query: 247 YQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAA 306 + + L T LE+ +F+ L+ K Sbjct: 244 RDNVQLSRTLSLIHTDLPLEL---------------DFRDCHRREPDRGALREALEKLEF 288 Query: 307 KPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISA 366 + A A + P D + A Sbjct: 289 GSILRELNLLAAPPAAEEAPWPP-------------------PPEAFLGYTLDRAQPMWA 329 Query: 367 NLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRG 426 N +GL+ A G + +L+ LK E + K Sbjct: 330 NWLGLA-AYAGGKVY---------------RGQPSLQELKKFPEIRSMV-----AKDLSV 368 Query: 427 ILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTF 486 + G+ + D ML +Y+ + S R+ AG + Sbjct: 369 LALKEGVWVP-PGDDPMLLAYLYDPSNSDP--ASTVRRYG----------AGDWGSDPG- 414 Query: 487 NQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVK 546 E A L + + ++ +++ IE PL VL+RIE G+ Sbjct: 415 -------------ERAQAAHTLWETLQSRIGENPKIEWLYQQIEKPLSAVLARIEARGIS 461 Query: 547 IDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG-IKPLKKTPGG 605 ++ + L SEEL ++ LE + H +AG FN++S QL+ +L+++ P +KT G Sbjct: 462 LNAEYLLQLSEELAKEISYLEAEIHRLAGRSFNVNSRDQLEVVLYDELKLSAPGRKTQTG 521 Query: 606 APSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTA 665 ST+ LEEL +P+ + IL YR L KLKSTY D LP +I+PKTGR+HT ++Q TA Sbjct: 522 KRSTAASALEELLGQHPIIERILTYRELTKLKSTYLDPLPKLIHPKTGRLHTRFNQTGTA 581 Query: 666 TGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLT 725 TGRLSS DPNLQNIPVR E GRRIR+AF A +V ADYSQIELR++AHLS D+ L+ Sbjct: 582 TGRLSSVDPNLQNIPVRTEIGRRIRKAFRAAPGMRLVVADYSQIELRVLAHLSGDENLIN 641 Query: 726 AFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFG 763 F EG+DIH TAA +FGL + V +EQRR+AK + G Sbjct: 642 VFREGRDIHTQTAAWMFGLEPDKVGAEQRRAAKCLVEG 679 Score = 235 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 75/169 (44%), Positives = 109/169 (64%), Gaps = 2/169 (1%) Query: 759 AINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETL 818 INFG++YGMSA L+ +L+I EA+ +++ YF YP V E++ER A A++ GYVET+ Sbjct: 1106 TINFGVLYGMSAHRLSNELSISYAEAEGFIERYFASYPKVREWIERVLADARQTGYVETM 1165 Query: 819 DGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIM 878 GRR ++ D+ S + R AAER A N P+QGTAAD++K AM+ + L+ +++ Sbjct: 1166 FGRRRFVADLGSRVRSVREAAERMAFNMPVQGTAADLMKLAMVKLQPELEP--LEAHLVL 1223 Query: 879 QVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQA 927 QVHDEL+ E D +AVA + ++M+ L VPL V G GENW +A Sbjct: 1224 QVHDELLVEAPADKAEAVAGVVREVMQQAWALAVPLEVGTGIGENWLEA 1272 >UniRef50_C3XEZ4 DNA polymerase I n=3 Tax=Bacteria RepID=C3XEZ4_9HELI Length = 1102 Score = 571 bits (1473), Expect = e-161, Method: Composition-based stats. Identities = 215/720 (29%), Positives = 350/720 (48%), Gaps = 61/720 (8%) Query: 255 DVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAKPQETSVA 314 +++ L ++ + +L+ ++ + + + + Sbjct: 394 NLDWNLDSTKMHPKPCTRPDLIENLDSNICHVECSETSSMESKRDISCLRTQYDNNLAAH 453 Query: 315 DEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFA 374 + I D + L + + + K + AFD ET+ LD A++VG SF Sbjct: 454 TNLTQNLQNPTFQYIPHLITDSKELFSLLESIPKGNLVAFDCETNGLDVREADMVGFSFC 513 Query: 375 IEPGVAAYIPVAH----------------------------------------------- 387 + A Y+P H Sbjct: 514 FDGLHAYYVPFLHGGIKREKSKYEVMKSQSISQNLFSTEEAKPTFSLFDDTTMSKDSADN 573 Query: 388 DYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRG-ILANYGIELRGIAFDTMLES 446 D +AP QIS+ A + L+ L +G N+K+D N+GI+ + D+ML + Sbjct: 574 DTTNAPAQISQSDAKKALEILF---SYPLIGHNIKFDLHIAWHNFGIKPKHTPQDSMLLA 630 Query: 447 YILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTL 506 ++ + +D+L ++ H I F +I K + TF+ I ++ A YAAEDA T Sbjct: 631 WLDDPSQSV-SLDNLMKKHFNHNMIAFSDIVPK---KATFDSIDIKTASNYAAEDAAATF 686 Query: 507 QLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAEL 566 QL+ L + + +++E P + L +E G+ I+ N + L +L Sbjct: 687 QLYFYFKNTL--YPHLFTLAKDLEFPFIRTLCAMEDCGIAINYSYFKNLKTTFSHTLQQL 744 Query: 567 EKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKV 626 +++ +E AG FNL+S KQ+ ILF+ + +K G ST E L L +P+ + Sbjct: 745 QQEIYEKAGVSFNLNSPKQVAEILFDTLKLDTKRKGKSG-YSTDEATLLALKDSHPVVPL 803 Query: 627 ILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEG 686 +LEYR + KL STY + + + R++T++ Q T TGRLSS PNLQNIPVR+E G Sbjct: 804 LLEYREIFKLFSTYIEPILKL-GKNENRIYTTFLQTGTNTGRLSSKSPNLQNIPVRSEMG 862 Query: 687 RRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPL 746 R IR+ F++ + Y ++S DYSQIELR++AH S DK LL +F DIH TA +F Sbjct: 863 RSIRKGFVSRDGYKLLSLDYSQIELRLLAHFSGDKVLLESFHNNADIHAETAKLLFKDSN 922 Query: 747 ETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTR 806 + S R AK+INFGLIYGM A L++ LNI + EA++Y++ YF +P V +++E + Sbjct: 923 KD-FSLLRSIAKSINFGLIYGMGARKLSQTLNITQTEAKQYIEDYFATFPSVKQFLESQK 981 Query: 807 AQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAW 866 + GY TL GR+ Y D S+ RA R +N QG+AAD+IK +M + Sbjct: 982 DSILKNGYSSTLLGRKRYF-DFFSATEFMRANFLREGVNTIFQGSAADLIKLSMNEIYKK 1040 Query: 867 LQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 +++ M++QVHDEL+FE+ +++++K++ ++MEN +L VPL+ + G W + Sbjct: 1041 IESLDNDCFMLLQVHDELIFEIKDSIIESLSKELKEIMENIYKLKVPLVCNLSIGNTWAE 1100 Score = 318 bits (815), Expect = 7e-85, Method: Composition-based stats. Identities = 113/491 (23%), Positives = 202/491 (41%), Gaps = 29/491 (5%) Query: 3 QIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVF 62 Q + +ILVD + +R+Y+A PPL NS PT + G ++ +L ++K + Sbjct: 2 QNTLSKVILVDTFGFFFRSYYALPPLHNSKHFPTSLLTGFATLIFNLYKEHKDSCIIFTL 61 Query: 63 DAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLA 122 + G R E + YK++R P DL AQ+ ++ MGLP L++ G EADD I TLA Sbjct: 62 EGGGTNRRKEFYPQYKANRKESPQDLLAQLPVAIEWLEKMGLPTLSLQGYEADDCIATLA 121 Query: 123 REAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLAL 182 A+K G I + DKD+ QL++ I + + + +E K+GV P I + ++ Sbjct: 122 TLAKKDGYETQIISHDKDLYQLISEGIYIFDYAKKQAITQKECYEKFGVLPNDFIMYQSI 181 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEK-IAGLSFRGAKTMAAKLEQNKE 241 +GDSSDN+PG+ G+G K AQ++L L++LY EK + K A ++++KE Sbjct: 182 VGDSSDNVPGIKGIGPKGAQSILAHFKSLESLYESIEKDYENIVSLLGKRTAGLIKEHKE 241 Query: 242 VAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKG 301 A++S L T++TD+ + + LL + + E ++ + Sbjct: 242 QAFISRNLVTLRTDLLQNYDFLS-KKNEFETSPLLTIKDELESYELHRILQKILPRRKNN 300 Query: 302 AKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSL 361 + + E A S ++ + + ++ + TE Sbjct: 301 TQHVETIPLGDIGANPFEQRAGFRSQNSGDSKENASQSPTPTQVVKNLDSISCHTEPLGE 360 Query: 362 DNISANLVGLSFAIEPG------VAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKAL 415 + +S + + A PVAH LD ++ +P L + Sbjct: 361 VSNMKAKSDISTSSQYDNHLDSINYALNPVAHPNLDWNLDSTKMHPKPCTRPDLIENLDS 420 Query: 416 KVGQ---------NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWL 466 + K D L +D L ++ ++ + +++ Sbjct: 421 NICHVECSETSSMESKRDISCLRTQ--------YDNNLAAH----TNLTQNLQNPTFQYI 468 Query: 467 KHKTITFEEIA 477 H +E+ Sbjct: 469 PHLITDSKELF 479 >UniRef50_C0X9C2 Possible DNA polymerase I (Fragment) n=3 Tax=Firmicutes RepID=C0X9C2_ENTFA Length = 431 Score = 549 bits (1416), Expect = e-154, Method: Composition-based stats. Identities = 206/433 (47%), Positives = 290/433 (66%), Gaps = 5/433 (1%) Query: 497 YAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHS 556 + A L K+ +L K ++F +E+PL +L +E G+++D L Sbjct: 1 HLARKIKAIQFLTSKLDSEL-TEKNQADLFYKMELPLSRILGDMEITGIRVDATRLKEMQ 59 Query: 557 EELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEE 616 E + RL E+E+K + AGEEFNL+S KQL ILFEK G+ +KKT G ST+ +VLE+ Sbjct: 60 VEFSERLKEIEEKIYAEAGEEFNLNSPKQLGVILFEKMGLPVIKKTKTG-YSTAVDVLEQ 118 Query: 617 LALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNL 676 L P+ IL YR +AK++STY + L +I P ++HT Y Q +T TGRLSS DPNL Sbjct: 119 LKEQAPIVADILTYRQIAKIQSTYVEGLLKVIQP-DNKIHTRYVQTLTQTGRLSSVDPNL 177 Query: 677 QNIPVRNEEGRRIRQAFIAPE-DYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHR 735 QNIP+R EEGR+IR+AF+ E +++I S+DYSQIELR++AH+S D+ L AF EG+DIH Sbjct: 178 QNIPIRLEEGRKIREAFVPREDNWLIFSSDYSQIELRVLAHISNDEHLKEAFVEGQDIHA 237 Query: 736 ATAAEVFGLPL-ETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFER 794 +TA VFG+ E VT RR AKA+NFG++YG+S +GL++ L I RK+AQ+Y+D YFE+ Sbjct: 238 STAMRVFGVEKAEDVTPNMRRQAKAVNFGIVYGISDYGLSQNLGITRKQAQQYIDTYFEK 297 Query: 795 YPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAAD 854 YPGV +YME AK++GYVETL RR YL DI S N R+ AER AIN P+QG+AAD Sbjct: 298 YPGVKQYMEEIVRDAKDKGYVETLYHRRRYLSDINSRNFNLRSFAERTAINTPIQGSAAD 357 Query: 855 IIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPL 914 I+K AMI + L+ E+ + M++QVHDELVFEV + +++ + + + ++ME+ L VPL Sbjct: 358 ILKIAMIEMARRLKEEKLQATMLLQVHDELVFEVPESELEQLNQLVKEVMEHAVSLHVPL 417 Query: 915 LVEVGSGENWDQA 927 + + G+ W +A Sbjct: 418 ITDSSWGKTWYEA 430 >UniRef50_Q72ES3 DNA polymerase I n=3 Tax=Desulfovibrio vulgaris RepID=Q72ES3_DESVH Length = 1015 Score = 541 bits (1395), Expect = e-152, Method: Composition-based stats. Identities = 198/513 (38%), Positives = 292/513 (56%), Gaps = 35/513 (6%) Query: 424 DRGILAN-YGIE---LRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479 D L + I FD L +Y+L+ + LA RW + + Sbjct: 530 DVKALLRSHAIWRDIPGDRWFDLGLAAYLLDPEERDYGWPRLAARWGDMLDRSTD----- 584 Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539 +ALE A A A +L + +E+PLVPVL+ Sbjct: 585 -----NPGLLALEMAQGMAGRLAGASLD----------------TLMRTLELPLVPVLAD 623 Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599 +E G+ +D +E+ L + ++ ++ AG +FN+ S +QL +LF G+ + Sbjct: 624 MEEAGIAVDRTAFAAFLDEVQHELDRITQEVYKAAGGQFNIRSAQQLGELLFGTLGLPTV 683 Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659 KT GG +TS++ LE+L+ +P+ +IL++R L KL+STY + LP +++ GR+H+++ Sbjct: 684 GKTRGGQATTSQDALEKLSGRHPVVDLILDFRKLEKLRSTYLEPLPKLVDAA-GRIHSTF 742 Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSR 719 +Q TATGRLSS++PNLQNIP R + GRR+R F A E ++VSADYSQIELR++AH+S+ Sbjct: 743 NQLATATGRLSSSNPNLQNIPARGDLGRRMRSCFTAAEGNLLVSADYSQIELRVLAHMSQ 802 Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779 D LL AF EG DIHR TA ++ E VT +QRR+AK INFGLIYGM L ++L I Sbjct: 803 DPTLLAAFREGADIHRRTAGLLYDTAPEDVTPDQRRNAKTINFGLIYGMGPQKLGQELRI 862 Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839 EA+++++ YF R + + + A A+EQG+V TL GRR LP++ S N R+ A Sbjct: 863 TVNEAKQFIERYFSRLQHLRNFYDNVEAAAREQGHVTTLAGRRRLLPEMHSENTQLRSQA 922 Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 R AIN +QG+AADIIK AM+A + R+I+QVHDEL+ EV + + A ++ Sbjct: 923 RRQAINTLIQGSAADIIKLAMLAAHDDPVLHGLKARLILQVHDELMLEVPEANAQAAGER 982 Query: 900 IHQLMENC----TRLDVPLLVEVGSGENWDQAH 928 + LM LDVPLLV+ G+G++W AH Sbjct: 983 LALLMSEVRPGGVTLDVPLLVDWGAGKDWGSAH 1015 Score = 315 bits (808), Expect = 5e-84, Method: Composition-based stats. Identities = 107/329 (32%), Positives = 161/329 (48%), Gaps = 13/329 (3%) Query: 5 PQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 Q PL L+DGS++++R ++AF + S G PT A++ V +L L+ + KP H A V D Sbjct: 10 TQEPLWLMDGSAFIFRGFYAFQNMQRSDGFPTNALFIVTRILLRLLREEKPRHFAFVLDG 69 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 KG TFR +LF YK+ R P+ L Q+EP+ MV A+GLPL G EADD I +LA Sbjct: 70 KGPTFRHDLFPLYKAQRAATPEPLVQQLEPIRRMVTALGLPLEVSDGCEADDCIASLAAR 129 Query: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTN--TILGPEEVVNKYGVPPELIIDFLAL 182 RPV+I DKD+ Q + PN+ L + + + G+ P D A+ Sbjct: 130 YRDE-RPVVIIGADKDLKQCLHPNVVLWDPGAKEEKLTTLASFTAETGLTPAQWPDVQAV 188 Query: 183 MGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEV 242 +GD+SDNIPG+PGVG KTA + L+ + + R + K EQ+ + Sbjct: 189 IGDTSDNIPGIPGVGPKTASKIFADFPTLEDIRDGFD-------RLPPNLQKKFEQHLDA 241 Query: 243 AYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADV---EAGKWLQA 299 +L QL T+ D +LT E+L VQ A +++E + + ++ +Q Sbjct: 242 MFLYRQLTTLAIDRCADLTPERLSVQPLDARTASTFLQEFELRALSRELAGMVRNGHVQV 301 Query: 300 KGAKPAAKPQETSVADEAPEVTATVISYD 328 A+ P +T + S Sbjct: 302 ALPGDASAPMDTGAMAAPAAPSTPRPSDS 330 >UniRef50_A5D075 DNA polymerase I-3'-5' exonuclease and polymerase domains n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D075_PELTS Length = 751 Score = 528 bits (1361), Expect = e-148, Method: Composition-based stats. Identities = 219/721 (30%), Positives = 345/721 (47%), Gaps = 76/721 (10%) Query: 261 TCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAG------KWLQAKGAKPAAKPQETSVA 314 + E Q + + +R A VE G + G + K +E +A Sbjct: 41 SWEDRWKQIFGMSKFKSGLDRQRAERVKAAVENGVLGMDVPPEKITGKLVSEKFRELELA 100 Query: 315 DEAPEVTATVIS-YDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSF 373 ++ ++ + S DNY I E+ KA +A L P FAFDTET +D +VG+S Sbjct: 101 EKNEKIAKLLKSKPDNYRLIQTEDQFKALLADLRHEPAFAFDTETTGVDVYQDVIVGVSL 160 Query: 374 AI-EPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYG 432 + G YIPVAH+ +A Q+ R L LK L D KV N K+D +L +G Sbjct: 161 TLPRAGYHVYIPVAHN--NAGPQLRRSYVLNGLKRYLTDPTVGKVLHNAKFDIHMLLRHG 218 Query: 433 IELRGIAFDTMLESYILNSVAGRHDMDSLAERW-----LKHKTITFEEIAGKGKNQLTFN 487 + +RG+A DTM+ ILN + +LA R+ ++ TFE++ GK F Sbjct: 219 MRMRGLAHDTMIAMKILNENEPSVALKNLATRYGKFFGFDGESHTFEDLFGKA----CFA 274 Query: 488 QIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKI 547 + L+ A YAA+D +T +L+ L K + L ++ +E PLV + +E+ G + Sbjct: 275 DVPLDMALIYAAKDTHLTWELYKWQMEHLTKREDLLKLYRELENPLVDICVEMEQTGFAV 334 Query: 548 DPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAP 607 D + EEL LAE+EK GE N +S QL +L+++ G+ K+ Sbjct: 335 DTAFAQEYGEELKGELAEVEKTLVAHFGE-INFNSPAQLAEVLYDRLGLPQGKER----- 388 Query: 608 STSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATG 667 ST + L+ L +P + +L+YR L KL TY + LP + GR+H S++Q T TG Sbjct: 389 STDVKTLKGLKGRHPGIEPLLKYRELTKLLGTYVEALPHQLKA-DGRIHGSFNQVATVTG 447 Query: 668 RLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAF 727 R +S +PNLQN+P R R+ +AP+ ++++ D+SQIE RI+AH+S D + Sbjct: 448 RFASREPNLQNLPPRA------RRLIVAPKGWLLLGIDFSQIEPRILAHMSGDPHFREPY 501 Query: 728 AEGKDIHRATAAEVFGLPLETVT--SEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQ 785 +G+D++ AA VF +PL S+ R+ K ++YG S F L+ QL I +EA Sbjct: 502 LKGEDLYSTLAARVFKVPLSECGDGSKYRKMMKIGLLAVMYGTSMFTLSEQLGISVEEAH 561 Query: 786 KYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLP------------------- 826 ++++ +++ YP V +++ T K+ YV TL GR+ P Sbjct: 562 RFIEGFYDEYPDVYAFIKDTWEFVKKNEYVATLYGRKRRFPGHREQAIVYDQLAAKICKA 621 Query: 827 ------------------DIKSSNGARRAAAER---AAINAPMQGTAADIIKRAMIAVDA 865 D+K GA + ER A+NA +QGTAADI+KRA++ + Sbjct: 622 LGTERVPLDFWSNKGIPKDLKRKFGAVKGEVERVRRMAVNARIQGTAADIMKRALLNLYE 681 Query: 866 WLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWD 925 + +A ++ VHDE + V A +++ M L+VP+ V+ W Sbjct: 682 YTRARGWKING--TVHDEALLLVRDTITLAEVEELEACMVRAAELEVPVKVDTEIMARWG 739 Query: 926 Q 926 Sbjct: 740 D 740 >UniRef50_D0YSZ1 DNA polymerase I n=6 Tax=Actinobacteridae RepID=D0YSZ1_9ACTO Length = 1040 Score = 527 bits (1359), Expect = e-148, Method: Composition-based stats. Identities = 216/562 (38%), Positives = 305/562 (54%), Gaps = 34/562 (6%) Query: 398 RERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHD 457 R + +L+ E V N K R L YG EL G D L Y+ + A R Sbjct: 482 RPESENVLRDFFAAENRTVVVYNAKALRHALRAYGWELSGTVRDVNLLDYLADPDASRLK 541 Query: 458 MDSLAERWLKHKTITFEEIAGKGKNQLTFNQ--------------------------IAL 491 ++ ER L GK Q+ F+ I L Sbjct: 542 FAAVTERLLGWSIDEKPSDIGKISEQMAFDLGWGNVTDAAGAAAVAASTGSKDISGGIPL 601 Query: 492 EEAGRYAAEDADVTLQLHLKMWPDLQK-HKGPLNVFENIEMPLVPVLSRIERNGVKIDPK 550 A L L + ++ + ++E+PL +L R+E G+ +D Sbjct: 602 PSLPETLVNQAKYALSLLDMLPILTEQVEYRRVGSLLDMELPLSRLLERMEDTGIAVDEG 661 Query: 551 VLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTS 610 +L +EL+ + E A E G E NLSS KQLQ +LF + G+ P +KT G +T Sbjct: 662 LLQRFDQELSSEVKRTEAAAFEAIGREVNLSSPKQLQDVLFNQLGLPPTRKTKTG-YTTD 720 Query: 611 EEVLEELA--LDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGR 668 + LEELA +P + +L +R +KL + GR+HT++ Q V ATGR Sbjct: 721 AKALEELALYNPHPFLQALLYFRDRSKLLQVVRN--LGDRIASDGRIHTTFGQTVAATGR 778 Query: 669 LSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYV-IVSADYSQIELRIMAHLSRDKGLLTAF 727 LSS DPNLQNIP R ++G RIR+ FIA +V +++ADYSQIE+RIMAHLS D+GL+ AF Sbjct: 779 LSSLDPNLQNIPARTDDGARIRETFIAQMPFVSLMTADYSQIEMRIMAHLSGDEGLIAAF 838 Query: 728 AEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKY 787 G+D+HR+ AA VFG+ E VT+ QR KA ++GL YG+SAFGLA QL I + EA+ Sbjct: 839 KSGEDLHRSVAALVFGVAPEAVTATQRTHVKATSYGLAYGLSAFGLAGQLRISQGEAKHL 898 Query: 788 MDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAP 847 M+ YF R+ V +Y+E ++A+ GY ET+ GRR YLP ++++N A RAA+NAP Sbjct: 899 METYFSRFGAVRDYLEHIVSEARRVGYTETMWGRRRYLPGLRATNRVVAENARRAALNAP 958 Query: 848 MQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENC 907 +QG+AAD++K+AM+ VDA + A R+++Q+HDELVFEV +VDA+ + + + M + Sbjct: 959 IQGSAADLMKQAMLRVDAAMAAAGLGSRILLQIHDELVFEVAPGEVDALRRVVTEAMTSV 1018 Query: 908 TRLDVPLLVEVGSGENW-DQAH 928 L VPL V VG G NW AH Sbjct: 1019 VELRVPLEVSVGVGANWRAAAH 1040 Score = 341 bits (875), Expect = 7e-92, Method: Composition-based stats. Identities = 90/296 (30%), Positives = 155/296 (52%), Gaps = 13/296 (4%) Query: 4 IPQNPLILVDGSSYLYRAYHAFPP--LTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 + L+++DG S +RA+++ PP + G T A++G ++ML +++ + KPTH Sbjct: 1 MSDLRLLVLDGHSLAFRAFYSRPPENFRTTTGVYTNAVHGFMSMLLAMLRREKPTHIGAA 60 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 FD +FR +++ YK R P + QIE + ++ A+G+ L + VEADD++ TL Sbjct: 61 FDLSRHSFRTDIYPDYKGGRAETPPEFLGQIENIQRLLDALGIKWLTMENVEADDILATL 120 Query: 122 AREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELII 177 A + + G VL+S+GD+D QL+ + T++ N T + P+ V +KYGV P Sbjct: 121 ATQGKAQGMQVLVSSGDRDTFQLIDESTTVLYPGHNAAQTTRMTPQAVKDKYGVWPAQYP 180 Query: 178 DFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLE 237 + AL+G+ +DN+PGVP VGEK+A A + GGL+ + A ++ G L Sbjct: 181 EVAALVGEKADNLPGVPLVGEKSAAAWINQYGGLEGILAHRGELKG-------KRGENLR 233 Query: 238 QNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEA 293 + + + +L ++TD+ L L + L + + + + EFK A Sbjct: 234 AHVDDVLRNRELNRLRTDLHLPLQLDDLRWRGMDVSAVDAVCAELEFKEMRRQFLA 289 >UniRef50_C8VXR3 DNA-directed DNA polymerase n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VXR3_DESAS Length = 755 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 218/717 (30%), Positives = 342/717 (47%), Gaps = 76/717 (10%) Query: 260 LTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAKPQETSVADEAPE 319 + + + E+ + + K E D+ + K A + + Q+ A + E Sbjct: 50 FSKKAITENPRNREKAIAVKKACEAGEIRLDISSKKLSCAAVFRLWRELQQQDTARKINE 109 Query: 320 VTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGV 379 + A + NY + EE L + L++ A DTET LD + +VGLSF + Sbjct: 110 LIAN--TPANYRLVQTEEQLDQLVTDLQQEDEIAVDTETTGLDVYNDVIVGLSFTLPKAD 167 Query: 380 A-AYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGI 438 YIPVAH A Q+SR L LKP+L D K+ N KYD +L +G+ LRGI Sbjct: 168 YHVYIPVAHKV--AGQQLSRRAVLTALKPILTDVNIGKILHNSKYDIHMLIRHGLRLRGI 225 Query: 439 AFDTMLESYILNSVAGRHDMDSLAERWLKH-----KTITFEEIAGKGKNQLTFNQIALEE 493 DTM+ +LN + +LA ++ K+ K+ T+EE+ GK +F +I L+ Sbjct: 226 KHDTMIAMAVLNENEPTLALKNLATKYGKYFGFEDKSYTYEELFGK----TSFAEIPLDA 281 Query: 494 AGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLH 553 A YAA+D +T +L+ L + + +++ +E PL+ V +E+ G ID Sbjct: 282 ALVYAAKDTHLTYELYKWQRQHLNQKESLRLIYDELENPLIDVCVDMEQAGFLIDMDFAM 341 Query: 554 NHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEV 613 + EL +A LE E G + N +S QL +L++K + +K G ST + Sbjct: 342 EYKAELKGEIAGLEANLTEHFG-DINFNSPLQLAAVLYDKLKLPVIK---GKERSTDVKT 397 Query: 614 LEELAL--DYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSS 671 L++L + V+L+YR L KL TY + LP +I K G +H S++Q T TGR +S Sbjct: 398 LKKLRDETKHEGIDVLLKYRELTKLLGTYVEALPQLIK-KDGLLHGSFNQVATVTGRFAS 456 Query: 672 TDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGK 731 +PNLQN+P R R+ +APED +I+ D+SQIE R++AH+S D L + +G+ Sbjct: 457 REPNLQNLPPRA------RRLIVAPEDSLILGVDFSQIEPRVLAHMSGDPHLQEPYLKGQ 510 Query: 732 DIHRATAAEVFGLPLETVTSEQ--RRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMD 789 D++ A+ VF + E + R+ K ++YG S + LA QL I +EA ++++ Sbjct: 511 DLYSTLASRVFKVSYEECGDDSKYRKMMKVGLLAVMYGTSMWTLADQLGITVEEANQFIE 570 Query: 790 LYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPD---------------------- 827 +F YP V ++ T AK+ YVETL GR+ P Sbjct: 571 DFFATYPDVYAFICATHEFAKQNEYVETLYGRKRRFPGHREKAIVYDKLATEICEILGTK 630 Query: 828 ----------------IKSSNGARRAAAE---RAAINAPMQGTAADIIKRAMIAVDAWLQ 868 ++ A + E R A+NA +QGTAADI+KRA+I + Sbjct: 631 AVPYDYWQYKKELPVILRRQFRAVKGEVERVRRMAVNARIQGTAADIMKRALINLY---- 686 Query: 869 AEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWD 925 ++I VHDE + V+K+ A ++I M L+VP+ V+ W Sbjct: 687 --NDGRKIIGTVHDEALLIVNKNITLAEVEKIEACMIRSANLNVPIRVDTELSTRWG 741 >UniRef50_B3RWI3 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3RWI3_TRIAD Length = 1492 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 165/578 (28%), Positives = 298/578 (51%), Gaps = 44/578 (7%) Query: 368 LVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGI 427 +VG++ + ++ + D + +E+ A+K+ NLK I Sbjct: 932 VVGIAICWGGFDSYFVNLGDCNTLQDDVANN----------IENSSAIKIAYNLKEQYKI 981 Query: 428 LANY-GIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK--GKNQL 484 L + +E++G ++D + ++L+ A ++ +L + + + G N + Sbjct: 982 LTRHLQVEIKGTSYDPKIGIWLLDQDAHEKTFHAIISNYLADEAALLDCVIGTCTDGNGI 1041 Query: 485 TFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNG 544 + + R A ++ + +LH + L K + ++ IEMP + L +E +G Sbjct: 1042 GLHYNSQTSGRRRACIESVLVHKLHSVVEAML-KERELYKLYSEIEMPTIRTLCWLELDG 1100 Query: 545 VKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPG 604 + E L RL +E+ A+ IAG F L+S + +L+ + Sbjct: 1101 IGFCMDECQQQIERLQYRLHYIEEMAYRIAGRSFQLTSPTDIAHVLYTELN--------- 1151 Query: 605 GAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLM----INPKTGRVHTSYH 660 T ++VL++L+ +PLP ++LE+R + + L KT RV+ + Sbjct: 1152 ----TCKDVLQKLSQIHPLPALVLEWRRINSALTKTLYPLKRYSKYCHKSKTYRVYPTC- 1206 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEGR--RIRQAFIAPEDYVIVSADYSQIELRIMAHLS 718 Q TATGR+S +DPNLQNIP + + R+R D +++SADYSQ+ELR++AHLS Sbjct: 1207 QMHTATGRISISDPNLQNIPKDFDIAKMVRMRNIIGCTNDTILLSADYSQLELRLIAHLS 1266 Query: 719 RDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLN 778 DK L +G D+ +A A+E +P + V+ EQR+ AK + +G+IYGM+ L Q+ Sbjct: 1267 EDKQLSRVLNDGGDVFKAIASEWLCIPTDHVSDEQRQRAKQMCYGIIYGMTPMALGEQMK 1326 Query: 779 IPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAA 838 +P ++A +M + RY G+ +++E+T + +GYV T+ R+ LP+I+S+N R+ Sbjct: 1327 VPEEQAATFMHTFKSRYNGIAKFIEKTLVSCRREGYVSTIMNRKRLLPNIRSTNARLRSH 1386 Query: 839 AERAAINAPMQGTAADIIKRAMIAVDAWLQA----------EQPRVRMIMQVHDELVFEV 888 AER AIN +QG+AAD++K AMI + + + + + ++Q+HDEL+FE+ Sbjct: 1387 AERQAINTTVQGSAADLVKIAMINIHKRIDEMCANRANRDNAEWKPKFVLQMHDELLFEI 1446 Query: 889 HKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 +++++V+ + Q MEN +L V L V++ +G+ W + Sbjct: 1447 KANELESVSLIVKQEMENALKLRVKLEVKIKTGKYWGE 1484 >UniRef50_Q4UGW4 DNA polymerase i, putative n=2 Tax=Theileria RepID=Q4UGW4_THEAN Length = 1786 Score = 487 bits (1255), Expect = e-136, Method: Composition-based stats. Identities = 189/765 (24%), Positives = 321/765 (41%), Gaps = 70/765 (9%) Query: 195 GVGE--KTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQLATI 252 G+GE KTA ++ + +Y S KL+ + E S + TI Sbjct: 1057 GLGELVKTAGKGIKK----EAIYENIRSTIPQSAVVNTKQTEKLDASGE----SETVETI 1108 Query: 253 KTD-------------VELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQA 299 K + V + +LE + FK + + G+ Sbjct: 1109 KVEDEGSPKSEVHSFGVSTSKSLLKLERINVVPNNDIDEFKLKYLSKLPKSLYKGESQPP 1168 Query: 300 KGAKPAAKPQETSVA-DEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTET 358 + A + + D V + D + + E L++ + D ET Sbjct: 1169 SQPEKVASNDQPPIPVDVYYSVNYDPLLIDGIIYVDSYEKLESLKPLFKDPKAVGVDIET 1228 Query: 359 DSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERA------LELLKPLLEDE 412 LD+ + + + ++ + I + + P+ + E LK L + + Sbjct: 1229 TGLDHNTNQIRLVQLSVPNQPSVIIDLFKLNTNNPESDNVVPGRNELIKCEWLKNLFKSK 1288 Query: 413 KALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAG-RHDMDSLAERWLKHKTI 471 +KV N K+D L YG E G FDTM+ S +L + + ++ER+L Sbjct: 1289 DTVKVFHNGKFDINFLRVYGFEFEGPIFDTMVASKLLVASRYISCKLTHVSERYLNIVLD 1348 Query: 472 TFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEM 531 ++ + QL EE Y+A D+ V L L++ + L+ + L ++E Sbjct: 1349 KTQQYSDWSTLQL------FEEQLLYSARDSFVLLPLYVILEHLLKINN--LADIASVEN 1400 Query: 532 PLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAH-EIAGEEFNLSSTKQLQTIL 590 + S +E NG+K+D L +EL E+ + ++ E NL+S KQ+ L Sbjct: 1401 KCILATSDMELNGIKVDEDKLRILQDELKQEHQEISNDLYSQLNHSEINLNSQKQVLEKL 1460 Query: 591 FEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINP 650 E + + KK TSE L + P+ + EYR K + +T KLP INP Sbjct: 1461 QELKIMDRSKKKIISD--TSESTLIR-NMSNPIISSLREYRKANKALTAFTQKLPNHINP 1517 Query: 651 KTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIE 710 T R++ +Y+Q +GR S PNLQ +P ++ R+ F+AP+ V AD+SQIE Sbjct: 1518 ITKRIYPNYNQLGAESGRFSCDGPNLQQVPRD----KKFRECFVAPKGSKFVIADFSQIE 1573 Query: 711 LRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSA 770 LRI A ++ D ++ A+ + D+H TA+ + + V E+R+ AKA+NFGLI+GMS Sbjct: 1574 LRIAAEIANDPKMIQAYQQNVDLHSLTASILKNKSINEVNKEERQLAKAVNFGLIFGMSI 1633 Query: 771 FGL------ARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLY 824 GL L + + EA++ +F + G+L + + V TL R Sbjct: 1634 NGLRMYAETGYNLKLTQTEAKEIYTSFFNNFKGILNWHNSVKNS--RPTMVRTLGNRLSV 1691 Query: 825 LPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDEL 884 + + ++N P+QGT+ADI K M + ++ ++I+ VHDE+ Sbjct: 1692 F----------ESFSFTRSLNYPVQGTSADITKETMARLVDSVKP--LNAKIIICVHDEI 1739 Query: 885 VFEVHKDDVDAVAKQIHQLMENCTR---LDVPLLVEVGSGENWDQ 926 + EV +D+ + K + M VP+ G++W Sbjct: 1740 ILEVPEDNAEKALKMLIDTMVKSGEKYLKKVPVEAMGSIGDSWAD 1784 >UniRef50_C3U0N1 Truncated DNA polymerase I n=1 Tax=uncultured bacterium RepID=C3U0N1_9BACT Length = 557 Score = 485 bits (1248), Expect = e-135, Method: Composition-based stats. Identities = 186/537 (34%), Positives = 266/537 (49%), Gaps = 47/537 (8%) Query: 7 NPLILVDGSSYLYRAYHAF--PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDA 64 L L+D + +YRAY+A P S G T A +G + L LI + KPTH AV FD Sbjct: 3 KKLFLLDAMALIYRAYYALIRSPRITSKGRNTNAQFGFTSTLIDLINKEKPTHLAVCFDT 62 Query: 65 KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124 + T R F YK++R P+DL + + + ++ A +P++ + G EADDVIGTLA + Sbjct: 63 EAATERHTDFAEYKANRQAAPEDLISALPDIKKIITAFNIPVVELDGYEADDVIGTLAWQ 122 Query: 125 AEKAGRPVLISTGDKDMAQ-LVTPNITLINT----MTNTILGPEEVVNKYGVP-PELIID 178 A G V + T DKD Q L+ N+ + IL +++ K+G+ + ++D Sbjct: 123 AADKGYEVFMVTPDKDYGQLLIHNNVFIYKPPYQGGKEDILDAKKICEKWGIERVDQVVD 182 Query: 179 FLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQ 238 L LMGD+ DNIPG+ G+GEKTA LL+ L+ + A + I G + K+ Sbjct: 183 MLGLMGDAVDNIPGIAGIGEKTACKLLKEFDNLENILANADNIKG-------AVGEKIRN 235 Query: 239 NKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADV------- 291 KE A +S +LA I TDV ++ E +++ EL LF + EFK + Sbjct: 236 GKEAALMSKKLARIITDVPVQFHEEDYRLKEWNQPELKELFNELEFKALGKRLLGDDFSV 295 Query: 292 --------EAGKWLQAKGAKPAAKPQETSVADEAPEVTATV---------ISYDNYVTIL 334 A + G +K E + E E T TV + Y I Sbjct: 296 FDKAGNATPANGQMDMFGTAVESKSTEENANSETDETTETVGLTADKNLGNTPHTYTLID 355 Query: 335 DEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPD 394 EE +K +A+L +FDTET LVGLSF + G YIP P Sbjct: 356 TEEKIKQLVAELMAQDEISFDTETTGTYAHDVELVGLSFCYKTGEGYYIP------CPPS 409 Query: 395 QISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAG 454 + L+ KPL +D +GQN+KYD +L YG+ L G FDTML Y++ G Sbjct: 410 ANETQALLQHFKPLFDDASKKWIGQNVKYDLIVLKWYGVLLAGQFFDTMLAHYLIEP-EG 468 Query: 455 RHDMDSLAERWLKHKTITFEEIAG-KGKNQLTFNQIALEEAGRYAAEDADVTLQLHL 510 R MD L+ ++L+++ + EE+ G KGKNQLT + LE+ YAAEDAD+TLQL Sbjct: 469 RRGMDYLSAQYLQYEPVHIEELIGKKGKNQLTMKDVELEKIKEYAAEDADITLQLKN 525 >UniRef50_B4KC49 GI21961 n=1 Tax=Drosophila mojavensis RepID=B4KC49_DROMO Length = 2181 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 166/583 (28%), Positives = 274/583 (46%), Gaps = 38/583 (6%) Query: 368 LVGLSFAIEPGVAAYIPVAHDYLDAPDQ--ISRERALELLKPLLEDEKALKVGQNLKYDR 425 L G++F + V Y+ + + Q + E ++ L LL + + + K Sbjct: 1607 LAGIAFCLNDNVVYYMNMQPEEEQQQQQQQVGSELKVQQLSSLLSRQDLTLLSHDAKEQL 1666 Query: 426 GILANYGIELRGI---AFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKN 482 +L +L I D + +++L ++ +++ + + G G+ Sbjct: 1667 KVLRQAVPQLNDIQVLLEDPKVANWLLQPDKTL-SFHNMCQQFAP-ECGALANLCGSGRG 1724 Query: 483 QLTF--NQIALEEAGRYAAEDADVTLQLHLKMWPDLQK--HKGPLNVFENIEMPLVPVLS 538 +F + + A A+ +A VT+ + +L++ L F +EMP+ L Sbjct: 1725 YSSFGLDASSAIMAKVRASIEACVTVHILNGQLENLERIGTGQLLKFFRELEMPIQMSLC 1784 Query: 539 RIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKP 598 +E G L +++ + LE K +E+ G FNL ST+ + +L Sbjct: 1785 HMECIGFPAKEHSLQRLFQQMMATMKRLESKIYELHGSRFNLGSTQAVAKVL-------G 1837 Query: 599 LKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTS 658 L + G STS ++LE++ D P+ ++IL YR L+ L + L + RVH Sbjct: 1838 LHRKANGRVSTSRQILEKI--DSPISQLILNYRKLSMLLAKSMQPLLK--CCQANRVHGQ 1893 Query: 659 YHQAVTATGRLSSTDPNLQNIPVRNE-------EGRRIRQAFIA-PEDYVIVSADYSQIE 710 TATGR+S ++PNLQN+ R AF E ++SAD+ Q+E Sbjct: 1894 -SITYTATGRISMSEPNLQNVAKDFHIELGKEQLKISCRSAFAPMDEKRCLISADFCQLE 1952 Query: 711 LRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSA 770 +RI+AHLS+DK LL +D+ A AA + V+ + R K I +G++YGM Sbjct: 1953 MRILAHLSQDKALLQVMNSTQDLFTAIAAHWNKIDESNVSEQLRNGTKQICYGIVYGMGM 2012 Query: 771 FGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKS 830 L+ L +EAQ + + YPG+ Y + A+ GYVET+ GRR YL I S Sbjct: 2013 RSLSEALKCTEQEAQMITEQFHLAYPGIKAYTMKVVKFARNNGYVETITGRRRYLDHINS 2072 Query: 831 SNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPR-------VRMIMQVHDE 883 + AER AIN+ +QG+AADI K A++ ++ L + + V +++ +HDE Sbjct: 2073 GEVQLKTQAERQAINSTIQGSAADIAKSAILRMEKNLGRYREKLGLAKNAVNLVLHLHDE 2132 Query: 884 LVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 L+FEV D VAK + MENC +L+VPL V++ G +W + Sbjct: 2133 LIFEVPTDKAKKVAKVLSLTMENCVKLNVPLRVKLKIGRSWGE 2175 >UniRef50_Q7TQ07 DNA polymerase nu n=13 Tax=Tetrapoda RepID=DPOLN_MOUSE Length = 864 Score = 477 bits (1229), Expect = e-133, Method: Composition-based stats. Identities = 171/591 (28%), Positives = 279/591 (47%), Gaps = 50/591 (8%) Query: 375 IEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLK-YDRGILANYG- 432 I YI H P Q + + + K V N K + R +L YG Sbjct: 274 ISEDHCVYIHTEHSPFWDPKQEAHSLFVRNILFWTLRCKCPVVCFNAKDFVRTVLQLYGE 333 Query: 433 ----IELRGIA-FDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFN 487 + D + +++++ + L + L+ K TF Sbjct: 334 DGSWKHVADFVGLDPRVAAWLIDPSDTAPSFEDLVAKHLEKSI--------TVKPSSTFR 385 Query: 488 QIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKI 547 + + + + + L + + L+ + G +F +E+PL+P+L+ +E + + + Sbjct: 386 EASRNTLSQNVFMNLKILYDLTMDLCSKLKAY-GLWQLFCTLELPLIPILAVMENHKIPV 444 Query: 548 DPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPG--- 604 D + + S L RL ELE++AH +AGE+F + S QL+ ILF K + L + Sbjct: 445 DKEEMERTSALLGARLKELEQEAHFVAGEQFLIMSNNQLREILFGKLKLHLLSQRKHLPR 504 Query: 605 ----GAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 STSE +L L +PLPK+ILEYR + K+KST+ D L + K G + ++++ Sbjct: 505 TGLQNQLSTSEAMLNSLQDLHPLPKLILEYRQVHKIKSTFIDGLLAYM--KKGSISSTWN 562 Query: 661 QAVTATGRLSSTDPNLQ-------------NIPVRNEEGRRI--RQAFIAPEDYVIVSAD 705 Q T TGRLS+ PN+Q N + EE I R F++ E + ++AD Sbjct: 563 QTGTVTGRLSAKHPNIQGISKHPIKISKPWNFKGKEEETVTISPRTLFVSSEGHTFLAAD 622 Query: 706 YSQIELRIMAHLSRDKGLLTAFAEGK--DIHRATAAEVFGLPLETVTSEQRRSAKAINFG 763 +SQIELRI+AHLS D LL F E + D+ ++ +P+E VT R K + + Sbjct: 623 FSQIELRILAHLSGDPELLKLFQESERDDVFSTLTSQWKDIPIERVTHMDREQTKKVVYS 682 Query: 764 LIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRL 823 ++YG LA L + EA +++ + ++Y + ++ + Q GYV ++ GRR Sbjct: 683 VVYGAGKERLAACLGVTVLEATHFLERFLQKYKKIKDFAQTVIGQCHSAGYVTSILGRRR 742 Query: 824 YLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQ-PRVRMIMQVHD 882 LP I + + RA AER A+N +QG+AAD+ K AMI + + R++ Q+HD Sbjct: 743 PLPRICAQDQQLRAQAERQAVNFVVQGSAADLCKLAMIRISTAVATSPTLTARLVAQIHD 802 Query: 883 ELVFEVHKDDVDAVAKQIHQLMEN-------CTRLDVPLLVEVGSGENWDQ 926 EL+FEV V A + ++ME+ +L VPL V + G +W Sbjct: 803 ELLFEVEDTQVPEFAALVRRIMESLQQVQTLELQLQVPLKVNLSVGRSWGH 853 >UniRef50_B4MBB7 GJ14321 n=1 Tax=Drosophila virilis RepID=B4MBB7_DROVI Length = 2086 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 163/580 (28%), Positives = 282/580 (48%), Gaps = 34/580 (5%) Query: 368 LVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGI 427 L G++F + VA Y+ + + +S E+ +ELL LL + + + K Sbjct: 1514 LAGIAFCLSDNVAFYMNMQAEEELEQQPVSTEQKVELLCSLLSRPELTLLIHDGKDQLKA 1573 Query: 428 LANYGIELRGI---AFDTMLESYILNSVAGRHDMDSLAERWLKH-KTITFEEIAGKGKNQ 483 L +L+G+ D + +++L ++ +++ ++ +G+G + Sbjct: 1574 LRQALPQLKGMQVKLEDPKVGNWLLQPDKTL-SFQNMCQQFAPECTALSHLCGSGRGYSS 1632 Query: 484 LTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQK--HKGPLNVFENIEMPLVPVLSRIE 541 + + A+ +A +++ + +L++ L F +EMP+ L +E Sbjct: 1633 YGLDASSAILGKVRASIEACLSVHILNGQLENLERIGTGQLLKFFRELEMPIQMSLCNME 1692 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 G + L +++ + +LE K E+ G FNL ST+ + +L L + Sbjct: 1693 CLGFPAQEQRLQRLLQQMLATMKKLEVKIFELHGSRFNLGSTQAVAKVL-------GLHR 1745 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 G STS ++LE+L D P+ ++IL++R L+ + + L + RVH Sbjct: 1746 KANGRISTSRQILEKL--DSPISQLILDHRKLSMVLAKNMQPLLK--CCQANRVHGQ-SI 1800 Query: 662 AVTATGRLSSTDPNLQNIPVR-------NEEGRRIRQAFIAP-EDYVIVSADYSQIELRI 713 TATGR+S ++PNLQN+ + R AF++ E + ++SAD+ Q+E+RI Sbjct: 1801 TYTATGRISMSEPNLQNVAKDFLVDLGQEKINISCRSAFVSSNEKHCLLSADFCQLEMRI 1860 Query: 714 MAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGL 773 +AHLS+DK LL +D+ A AA + V+ + R K I +G++YGM L Sbjct: 1861 LAHLSQDKALLKVMNSPQDLFTAIAAHWNKIAESDVSEQLRNGTKQICYGIVYGMGMRSL 1920 Query: 774 ARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNG 833 A L +EAQ + + Y G+ Y + A+ GYVET+ GRR YL I S Sbjct: 1921 AESLKCTEQEAQMISEQFHLAYAGIKAYASKVVKFARNNGYVETITGRRRYLDHINSGEP 1980 Query: 834 ARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPR-------VRMIMQVHDELVF 886 + AER AIN+ +QG+AADI K A++ ++ + + + V +++ +HDEL+F Sbjct: 1981 QLKNQAERQAINSTIQGSAADIAKSAILRMEKNIARYREKLGLAENAVNLVLHLHDELIF 2040 Query: 887 EVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 EV D VAK + MENC +L+VPL V++ G +W + Sbjct: 2041 EVPADKAKKVAKVLSLTMENCVKLNVPLRVKLKIGRSWGE 2080 >UniRef50_B4NI17 GK13557 n=1 Tax=Drosophila willistoni RepID=B4NI17_DROWI Length = 2080 Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 159/580 (27%), Positives = 277/580 (47%), Gaps = 38/580 (6%) Query: 368 LVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGI 427 + LSF + VA Y+ + + + + + +E L LL + + + K I Sbjct: 1510 IACLSFCLADNVAYYMNMQQEG--KKEAVGTQLKVEELVKLLTRPELTLIMHDGKEQLKI 1567 Query: 428 LANY---GIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQL 484 L + + + D + +++L ++ +++ + ++ G G+ Sbjct: 1568 LRHAMPQLVRIAIKLEDPKVANWLLQPDK-VLSFHNMCQQFAP-ECKGLTDLCGSGRGYS 1625 Query: 485 TFNQIALEEAGR--YAAEDADVTLQLHLKMWPDLQK--HKGPLNVFENIEMPLVPVLSRI 540 ++ A A+ +A V++ + +L++ L F ++EMP+ L + Sbjct: 1626 SYGLDASNAILPKIRASVEACVSMHILHGQIENLERIGTGQLLKFFRDLEMPIQLSLCNM 1685 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK 600 E G + L S+++ + +LE K +E+ G FNL S++ + +L L Sbjct: 1686 EFTGFPAKQESLQGLSQQMLSTMKKLEAKIYELHGSRFNLGSSQAVAKVL-------GLH 1738 Query: 601 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 + G STS ++LE+L D P+ ++I+ YR L+ + + L + RV+ Sbjct: 1739 RKASGKVSTSRQILEKL--DSPISQLIVGYRKLSTVLAKNVQPLLK--CCQDNRVYGQ-S 1793 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEEG-------RRIRQAFIAPE-DYVIVSADYSQIELR 712 + TATGR+S ++PNLQN+ E R AF+ + ++SAD+ Q+E+R Sbjct: 1794 LSYTATGRISMSEPNLQNVAKDFEINLDSDKVNISCRSAFLPMDFKRCLISADFCQLEMR 1853 Query: 713 IMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFG 772 I+AHLS+D LL +D+ A AA + V+ R K I +G++YGM Sbjct: 1854 ILAHLSQDPALLEVMNSPRDLFTAIAARWNHMNESEVSENLRNGTKQICYGIVYGMGMRS 1913 Query: 773 LARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSN 832 LA L EAQ + + + Y G+ Y+++ A+ GYVET+ GRR YL I S Sbjct: 1914 LAESLKCTENEAQTVSEQFHQTYAGISAYIQKVVKFARNNGYVETITGRRRYLEHINSGE 1973 Query: 833 GARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPR-------VRMIMQVHDELV 885 + AER AIN+ +QG+AADI K A++ ++ L + R V +++ +HDEL+ Sbjct: 1974 LQIKNQAERQAINSTIQGSAADIAKSAILRMEKHLLRYRERLGITENSVNLVLHLHDELI 2033 Query: 886 FEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWD 925 FEV D +AK + ME+C +L VPL V++ G +W Sbjct: 2034 FEVPIDKAKKIAKVLSLTMESCVKLSVPLKVKLKIGRSWG 2073 >UniRef50_C3U0N4 DNA polymerase I n=1 Tax=uncultured bacterium RepID=C3U0N4_9BACT Length = 803 Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 185/430 (43%), Positives = 261/430 (60%), Gaps = 11/430 (2%) Query: 506 LQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAE 565 ++ K+ + + G +V+ IE PL+ VL I G+ +D L S + L Sbjct: 370 HEISTKLEERVMSNLGLASVYVKIEQPLMEVLQHINATGITLDTAYLAGLSVTMHTELTA 429 Query: 566 LEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL--KKTPGGAPSTSEEVLEELALDYPL 623 LE K + AG EFN++S KQ+ +LF++ G+KP KKT GG ST E LE++ D+P+ Sbjct: 430 LEGKIYTHAGREFNINSPKQMGEVLFDEMGLKPKNQKKTAGGQRSTKESELEKMREDHPI 489 Query: 624 PKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRN 683 IL YR L KL STY D LP ++ GR+ T++ Q ATGR++S +PNLQNIP+R Sbjct: 490 ITEILRYRELQKLVSTYIDNLPPLV-SADGRLRTTFVQTGAATGRMASQNPNLQNIPIRT 548 Query: 684 EEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFG 743 EE + IRQAF+A Y IVS DYSQIELRI A LSRD+ ++ FA G+D+H A VFG Sbjct: 549 EESKAIRQAFVASPGYSIVSIDYSQIELRIAAILSRDEKMVEIFARGEDVHTGVAVRVFG 608 Query: 744 LPLETVTSEQRRSAKAINFGLIYGMSAFGLARQL--NIPRKEAQKYMDLYFERYPGVLEY 801 + E VT E RR AK INFG++YGM L L R+EAQ++ + YF + + EY Sbjct: 609 VTPEEVTREMRRKAKVINFGILYGMGVNALRGNLGEGTSREEAQEFFNAYFNTFTRLAEY 668 Query: 802 MERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMI 861 +E T+A A++ GY ETL GRR + P ++S+ RA AER AINAP+QGTAAD ++ AM Sbjct: 669 LEETKAFARKNGYTETLFGRRRHFPGMQSTAPFIRAQAERMAINAPVQGTAADAMRVAMN 728 Query: 862 AVDAWLQAEQ--PRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTR----LDVPLL 915 V ++Q E+ V +++QVHDEL+FE+ + ++ ++ +LM+ VP+ Sbjct: 729 LVYQYIQTEKKTDDVHILLQVHDELLFEIKNNVLETEIPKLVELMQGVLEGYDTSGVPIK 788 Query: 916 VEVGSGENWD 925 +V G NW Sbjct: 789 ADVAVGPNWG 798 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 119/407 (29%), Positives = 188/407 (46%), Gaps = 20/407 (4%) Query: 2 VQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 ++ + L+L+D + L+RAYHA P + +GEPTGA+YGV+ ML +I +KP + A Sbjct: 12 IKSDKKTLVLLDSHAILHRAYHALPDFASPSGEPTGALYGVVAMLLKIIEDFKPDYIAAC 71 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 FD T+R E F YK R D L QI + A G+P+ G EADD++GT+ Sbjct: 72 FDLPEPTYRHEAFAAYKGTRSKTDDALVQQIIRSRDIFAAFGIPIYEHPGFEADDMLGTI 131 Query: 122 AREAE-KAGRPVLISTGDKDMAQLVT-PNITLINTMTN----TILGPEEVVNKYGVPPEL 175 A + V+I++GD D Q V + + + E V ++G P+L Sbjct: 132 AYQTRDDKDLTVIIASGDMDTMQCVEKKRVQVYTLKKGIKDTILYDEEAVKERFGFGPKL 191 Query: 176 IIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEP--EKIAGLSFRGAKTMA 233 + D+ L GD+SDNIPG+ G+GEKTA L+ G +D +Y + ++ L+ + Sbjct: 192 VPDYKGLRGDTSDNIPGIVGIGEKTATDLITQFGSIDDIYKKLKKDEAPFLAAGIKPRII 251 Query: 234 AKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQP-AAEELLGLFKKYEFKRWTADVE 292 L+ +E A S LATI+TD + Q+ + +L LF + F+ A + Sbjct: 252 GLLKAGEEEAQFSKMLATIRTDAPITFVPHATHWQERADTDVILNLFSELGFRTLGAKI- 310 Query: 293 AGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVF 352 K L A A A P E+ V + A ++ +L+ E A A + Sbjct: 311 --KTLFALAADVPANPAESGVTPADIQKAAVLLW------LLESERTNASYADIIDYGRS 362 Query: 353 AFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRE 399 F ET + IS L + + Y+ + ++ I+ Sbjct: 363 YF--ETANFHEISTKLEERVMSNLGLASVYVKIEQPLMEVLQHINAT 407 >UniRef50_Q7TQC0 DNA polymerase Q n=13 Tax=Deuterostomia RepID=Q7TQC0_MOUSE Length = 2587 Score = 471 bits (1212), Expect = e-131, Method: Composition-based stats. Identities = 173/685 (25%), Positives = 287/685 (41%), Gaps = 127/685 (18%) Query: 368 LVGLSFAIEPGVAAYIPVAHDYLDAPDQISRE--------------RALELLKPLLEDEK 413 +VGL+ A Y+ + + + S L+ D + Sbjct: 1898 VVGLAVCWGAKDAYYLSLQKEQKQSEISPSLAPPPLDATLTVKERMECLQSCLQKKSDRE 1957 Query: 414 ALKVGQNLKYDRGILA-NYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTIT 472 V + +L + GI L D + ++L+ + + S+ +L H+ Sbjct: 1958 RSVVTYDFIQTYKVLLLSCGISLEPSYEDPKVACWLLDPDSKEPTLHSIVTSFLPHELAL 2017 Query: 473 FEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMP 532 E + Q + E +GRY A V + + L + + ++F +EMP Sbjct: 2018 LEGMETGPGIQSLGLNVNTEHSGRYRASVESVLIFNSMNQLNSLLQKENLHDIFCKVEMP 2077 Query: 533 LVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFE 592 L+ +E NG+ + + +L +E +A+++AG F+ +S + +LF Sbjct: 2078 SQYCLALLELNGIGFSTAECESQKHVMQAKLDAIETQAYQLAGHSFSFTSADDIAQVLFL 2137 Query: 593 KQGIKP------------LKKTPGG-----------APSTSEEVLEELALDYPLPKVILE 629 + + P L T G STS+++L +L +PLP +ILE Sbjct: 2138 ELKLPPNGEMKTQGSKKTLGSTRRGNESGRRMRLGRQFSTSKDILNKLKGLHPLPGLILE 2197 Query: 630 YRGLAKLKSTYTDKLPLMINP----KTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNE- 684 +R ++ + L + + R++ Q+ TATGR++ T+PN+QN+P E Sbjct: 2198 WRRISNAITKVVFPLQREKHLNPLLRMERIYP-VSQSHTATGRITFTEPNIQNVPRDFEI 2256 Query: 685 --------------------------------------------------EGRRIRQAFI 694 +R AF+ Sbjct: 2257 KMPTLVRESPPSQAPKGRFPMAIGQDKKVYGLHPGHRTQMEEKASDRGVPFSVSMRHAFV 2316 Query: 695 APEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQR 754 +I++ADYSQ+ELRI+AHLSRD L+ G D+ R+ AAE + + V + R Sbjct: 2317 PFPGGLILAADYSQLELRILAHLSRDCRLIQVLNTGADVFRSIAAEWKMIEPDAVGDDLR 2376 Query: 755 RSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGY 814 + AK I +G+IYGM A L Q+ I +A Y+D + RY G+ +M T ++ G+ Sbjct: 2377 QHAKQICYGIIYGMGAKSLGEQMGIKENDAASYIDSFKSRYKGINHFMRDTVKNCRKNGF 2436 Query: 815 VETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRV 874 VET+ GRR YLP IK N +A AER AIN +QG+AADI+K A + + L+ + Sbjct: 2437 VETILGRRRYLPGIKDDNPYHKAHAERQAINTTVQGSAADIVKIATVNIQKQLETFRSTF 2496 Query: 875 R---------------------------------MIMQVHDELVFEVHKDDVDAVAKQIH 901 + I+Q+HDEL++EV ++DV VA+ + Sbjct: 2497 KSHGHRESMLQNDRTGLLPKRKLKGMFCPMRGGFFILQLHDELLYEVAEEDVVQVAQIVK 2556 Query: 902 QLMENCTRLDVPLLVEVGSGENWDQ 926 ME +L V L V+V G +W + Sbjct: 2557 NEMECAIKLSVKLKVKVKIGASWGE 2581 >UniRef50_B0TCV6 DNA polymerase i n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TCV6_HELMI Length = 645 Score = 470 bits (1211), Expect = e-131, Method: Composition-based stats. Identities = 191/643 (29%), Positives = 307/643 (47%), Gaps = 54/643 (8%) Query: 329 NYVTILDEETLKAWIAKLEKAPVFAFDTETD-----------SLDNISANLVGLSFAIEP 377 Y + D L L+KA + AFD ET +LD A++ G+SF++ Sbjct: 2 EYKCVTD---LTELRDYLDKAGLIAFDFETAPREKYRRDEKAALDAHKADIAGVSFSVSE 58 Query: 378 GVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRG 437 G A Y+P+ H + L + + + K +K+ NL ++ L G+ L+ Sbjct: 59 GTAVYVPLKHKTGKNAG-SPDKIMQWLSENVFANRKVVKIAHNLSFEAMFLYALGVVLQP 117 Query: 438 IAFDTMLESYI-LNSVAG-----RHDMDSLAERWLKHKTITFEEI-AGKGKNQLTFNQIA 490 +DT+ + + L S + +L + +FE + AG+ ++L Sbjct: 118 PCYDTIAAALMTLKSNTAFRTLADSGLKTLTQELFGVDLPSFETVTAGRYFDELDPQD-- 175 Query: 491 LEEAGRYAAEDADVTLQLHLKMWPDLQKH-KGPLNVFENIEMPLVPVLSRIERNGVKIDP 549 EE RYA D+D TL+L+ ++ + E +E P ++ NG+ D Sbjct: 176 -EETVRYACADSDYTLRLYHLFNNWFNRYLPKHRFIVEKLESPAAVYCGLMKYNGLLADE 234 Query: 550 KVLHNHSEELTLRLAELEKKAHEIAGEEFNLS---STKQLQTILFEKQGIKPLKKTPGGA 606 +++ E +LAEL + G + N+ ST + L++ + K T Sbjct: 235 ELMLKKQAEAEGKLAELRGNIAFLIG-DVNIGANASTSAFKKYLYDDLKLPVFKTTAKYQ 293 Query: 607 PSTSEEVLEELALDY--------PLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTS 658 + +E + L+ L +++ EYR K+KSTY D IN TGR+H Sbjct: 294 EAMDDEAMILLSEWCRENRPELAELFELVQEYRRWGKIKSTYIDGYLEYINSVTGRIHPD 353 Query: 659 YHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLS 718 T TGR ++ +PNLQN P ++ + +R FIAP+ ++S D+SQIELR+ A Sbjct: 354 MFPLGTETGRFAARNPNLQNCPRKDNDPVGVRNFFIAPKGKALLSLDFSQIELRVGAFYC 413 Query: 719 RDKGLLTAFAEGKDIHRATAAEVFGLPLETV-------TSEQRRSAKAINFGLIYGMSAF 771 RD+ +L + G DIH T + ++ +P E E+R AK NFG+ YG+ Sbjct: 414 RDERMLETYRTGGDIHAQTTSVIYRIPFEEAADKSAQHYKERRAIAKNCNFGVFYGLFPK 473 Query: 772 GLARQLN------IPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYL 825 GL R L P E ++ + YP ++++ E+T+ +A + Y ET GRR YL Sbjct: 474 GLHRNLKFKAGLDTPLSECERIIANLKAGYPRLVQWQEKTKKRAASRRYTETWLGRRRYL 533 Query: 826 PDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELV 885 PDI SS+ +++ AER A+N P+QGTAADI+K A+ + L ++ R+R ++Q+HDELV Sbjct: 534 PDIASSDWGKKSFAERCALNTPIQGTAADILKLALGRIIEGL-PQRMRLRPVLQIHDELV 592 Query: 886 FEVHKDDVDAVAKQIHQLMENCT--RLDVPLLVEVGSGENWDQ 926 FEV +D V A I ME DVP++ E G + + Sbjct: 593 FEVPEDKVHEAAVFIKSCMEERPFEEFDVPIVAEAAFGVRFGE 635 >UniRef50_Q7Z5Q5 DNA polymerase nu n=15 Tax=Amniota RepID=DPOLN_HUMAN Length = 900 Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats. Identities = 186/754 (24%), Positives = 319/754 (42%), Gaps = 80/754 (10%) Query: 214 LYAEPEKIAGLSFRGAKTM--AAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPA 271 L S + L + S Q+A +E + + + Sbjct: 140 LMENINNENKGSINLKRKHITYNNLSE-----KTSKQMA-----LEEDTDDAEGYLNSGN 189 Query: 272 AEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYV 331 + L F A + + L+ A + T V Sbjct: 190 SGALKKHFCDIRHLDDWAKSQLIEMLKQAAALVITVMYTDGSTQLGADQTPVSSVRGIVV 249 Query: 332 TILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLD 391 + K P V F + YI + H + Sbjct: 250 LV------KRQAEGGHGCPDAPA-----------CGPVLEGF-VSDDPCIYIQIEHSAIW 291 Query: 392 APDQISRERALELLKPLLEDEKALKVGQNLK-YDRGILANYGIE------LRGIAFDTML 444 +Q + ++ + K + N K + R +L +G + I D + Sbjct: 292 DQEQEAHQQFARNVLFQTMKCKCPVICFNAKDFVRIVLQFFGNDGSWKHVADFIGLDPRI 351 Query: 445 ESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADV 504 +++++ + L E++ + K T+ + + E+ Sbjct: 352 AAWLIDPSDATPSFEDLVEKYCEKSI--------TVKVNSTYGNSSRNIVNQNVRENLKT 403 Query: 505 TLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLA 564 +L + + L K G +F +E+PL+P+L+ +E + ++++ + + S L RL Sbjct: 404 LYRLTMDLCSKL-KDYGLWQLFRTLELPLIPILAVMESHAIQVNKEEMEKTSALLGARLK 462 Query: 565 ELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTP-------GGAPSTSEEVLEEL 617 ELE++AH +AGE F ++S QL+ ILF K + L + PSTSE VL L Sbjct: 463 ELEQEAHFVAGERFLITSNNQLREILFGKLKLHLLSQRNSLPRTGLQKYPSTSEAVLNAL 522 Query: 618 ALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQ 677 +PLPK+ILEYR + K+KST+ D L + K G + ++++Q T TGRLS+ PN+Q Sbjct: 523 RDLHPLPKIILEYRQVHKIKSTFVDGL--LACMKKGSISSTWNQTGTVTGRLSAKHPNIQ 580 Query: 678 NI---PVRNEEGRRI------------RQAFIAPEDYVIVSADYSQIELRIMAHLSRDKG 722 I P++ + R F++ + + ++AD+SQIELRI+ HLS D Sbjct: 581 GISKHPIQITTPKNFKGKEDKILTISPRAMFVSSKGHTFLAADFSQIELRILTHLSGDPE 640 Query: 723 LLTAFAEGK--DIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP 780 LL F E + D+ ++ +P+E VT R K + + ++YG LA L +P Sbjct: 641 LLKLFQESERDDVFSTLTSQWKDVPVEQVTHADREQTKKVVYAVVYGAGKERLAACLGVP 700 Query: 781 RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE 840 +EA ++++ + ++Y + ++ AQ + G V ++ GRR LP I + + RA AE Sbjct: 701 IQEAAQFLESFLQKYKKIKDFARAAIAQCHQTGCVVSIMGRRRPLPRIHAHDQQLRAQAE 760 Query: 841 RAAINAPMQGTAADIIKRAMIAVDAWLQAEQ-PRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 R A+N +QG+AAD+ K AMI V + A R++ Q+HDEL+FEV + A Sbjct: 761 RQAVNFVVQGSAADLCKLAMIHVFTAVAASHTLTARLVAQIHDELLFEVEDPQIPECAAL 820 Query: 900 IHQLMEN-------CTRLDVPLLVEVGSGENWDQ 926 + + ME+ +L VPL V + +G +W Sbjct: 821 VRRTMESLEQVQALELQLQVPLKVSLSAGRSWGH 854 >UniRef50_C3YL74 Putative uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae RepID=C3YL74_BRAFL Length = 2215 Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats. Identities = 178/669 (26%), Positives = 293/669 (43%), Gaps = 108/669 (16%) Query: 356 TETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKA- 414 ET + + ++ A P+ D++ E L +K +LE Sbjct: 1549 FETFVAEWKTKTNYAIAVAYTTDEMIPPPLD-------DRLPVEERLHNIKSVLEKGDVC 1601 Query: 415 -LKVGQNLKYDRGILA-NYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTIT 472 +V +LK LA GI + G D + ++L+ A +R+ ++ Sbjct: 1602 SSQVLFDLKPQYKALALGCGITMNGDFEDPKVADWLLDPGAKVKSFHGTVQRFTPQESYL 1661 Query: 473 FEEIAGK-GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEM 531 + + G G L AA + +T + ++ L + +G F ++EM Sbjct: 1662 LQGLGGCFGVGSLAMTVQNSGSGRMRAALECVLTFHMMEEL-DKLLEAQGLSTAFRDVEM 1720 Query: 532 PLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILF 591 P + L+R+E NG P + + +L LE++A+++AG F L+S + +LF Sbjct: 1721 PSLVTLARMELNGAGFSPVECETQCQIMQAKLRMLEEQAYQLAGHTFALTSPDDIAQVLF 1780 Query: 592 EKQG----------------------IKPLKKTPGGAPSTSEEVLEELALDYPLPKVILE 629 + + P STS++VLE+L + LP VILE Sbjct: 1781 LELKLPANGDPSSTTNPQPRKTLGTARPARGRKPLKHLSTSKDVLEKLKKFHALPGVILE 1840 Query: 630 YRGLAKLKSTYTDKLPLMINPK----TGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNE- 684 +R ++ + L R++ + TATGR++ DPNLQNIP E Sbjct: 1841 WRRISNSLTKVVFPLQKEKVYNPRLNMDRIYGNCD-LHTATGRVTFHDPNLQNIPKDFEI 1899 Query: 685 -------------------------------------------EGRRIRQAFIAPEDYVI 701 +R AFI + V+ Sbjct: 1900 EMPTIIGDSPPPGCGETVSKRKGRKVVRRTDGRRVESDGAGQAFSVSLRHAFIPFQGGVL 1959 Query: 702 VSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAIN 761 ++ADYSQ+ELRI+AHLS+D L G+D+ +A A++ G+ +E V+ + R+ AK + Sbjct: 1960 LAADYSQLELRIIAHLSQDSKLTQVLNSGQDVFKAIASQWKGVAMEDVSDKLRQQAKQLC 2019 Query: 762 FGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGR 821 +G+IYG+ A L QL + +E +++ + +Y G+ Y+ T Q K+ G+V+T+ GR Sbjct: 2020 YGMIYGIGAKALGEQLGVDEEEGACFIETFKSKYTGMRRYLHTTVDQCKKDGFVQTMAGR 2079 Query: 822 RLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQP--------- 872 R YLP I N R AER A+N +QG+AAD++K+AM+++D LQ P Sbjct: 2080 RRYLPGITEGNHHVRCHAERQAVNTTVQGSAADLVKKAMVSIDQKLQKLFPATRRSHRQD 2139 Query: 873 ----------------RVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLV 916 +I+Q+HDEL++EV ++DV VA+ + MEN +L V L V Sbjct: 2140 TQKRSRRSQQPSSPPRGAYLILQLHDELIYEVRREDVQQVAQIVKHEMENAVKLSVVLPV 2199 Query: 917 EVGSGENWD 925 +V G W Sbjct: 2200 KVKVGPTWG 2208 >UniRef50_A3DFZ4 DNA-directed DNA polymerase n=3 Tax=Clostridium RepID=A3DFZ4_CLOTH Length = 640 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 188/633 (29%), Positives = 299/633 (47%), Gaps = 52/633 (8%) Query: 339 LKAWIAKLEKAPVFAFDTETD-----------SLDNISANLVGLSFAIEPGVAAYIPVAH 387 L L+ +FAFD ET +LD A++ G+SF++ G A Y+P+ H Sbjct: 9 LSEIKEYLKNTVLFAFDFETSPRDKWRNDKSAALDAHKADITGISFSVSEGTAIYVPLKH 68 Query: 388 DYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESY 447 + ++ + LK L E + +KV NL ++ L GI L+ +DT+ S Sbjct: 69 RSG--RNAENQAAIWDYLKLLFESKDVIKVAHNLAFESMFLYARGIVLQKPCYDTIAASQ 126 Query: 448 I-LNS-----VAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIAL--EEAGRYAA 499 + L S + +LA K + F + F+++ E+ RYA Sbjct: 127 LTLKSKWEFRSLADSGLKTLAPALCKAEMTEFSTVT----EGRFFDELNPQDEKTVRYAC 182 Query: 500 EDADVTLQLHLKMWPDLQKH-KGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEE 558 D+D TL+L+ + + E +E P + ++ NG+ +D + E Sbjct: 183 ADSDYTLRLYHVFNQWFDRFLPKHRTIVEEVESPTSVYVGIMKYNGILVDKSAMLKKQAE 242 Query: 559 LTLRLAELEKKAHEIAG--EEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVL-- 614 ++ + K+ I G E +ST + LF G+ +K T + +E + Sbjct: 243 AAEKIVSIRKEIAGIIGNVEIGANASTSAFKKYLFVDLGLPVMKTTAKHQEAADDETMIL 302 Query: 615 --EELALDYPLP----KVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGR 668 E A + P +++ EYR KLKSTY D I+ TGR+H T TGR Sbjct: 303 LKEWCATNRPELVRLFELVQEYRKWGKLKSTYIDGYLRFIDEDTGRIHPDLMPLGTETGR 362 Query: 669 LSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFA 728 +S +PN+QN P ++ + +R+ IAP V++S D+SQIELR+ A RDK +L + Sbjct: 363 FASRNPNMQNCPQKDNDPIGVRKFIIAPAGKVLLSLDFSQIELRVGAFYCRDKRMLETYR 422 Query: 729 EGKDIHRATAAEVFGLPLETV-------TSEQRRSAKAINFGLIYGMSAFGLARQLNI-- 779 G DIH T + ++ +P E E+R AK NFG+ YG+ GL R L Sbjct: 423 TGGDIHAQTTSVIYRIPFEEAADKNAPHYKERRTIAKNCNFGVFYGLFPTGLQRTLKFKA 482 Query: 780 ----PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGAR 835 E + + YPG+ ++ + + +A Y ET GRR YL I+SS+ + Sbjct: 483 GINPTLAECETIIQNLKSGYPGLAKWQDEVKKRAAVSCYSETWLGRRRYLLGIRSSDWGK 542 Query: 836 RAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDA 895 ++ AER A+N P+QGTAADI+K A + + L E+ ++ ++Q+HDELVFE+ +D VD Sbjct: 543 KSFAERCALNTPIQGTAADILKLACGRIISGL-PERLWLKPMLQIHDELVFELPEDKVDE 601 Query: 896 VAKQIHQLMENC--TRLDVPLLVEVGSGENWDQ 926 I + ME DVP++ E G N+ + Sbjct: 602 AVVFIKECMETQPFPAFDVPIVAEASVGRNFGE 634 >UniRef50_Q588V7 Helicase and polymerase containing protein TEBICHI n=7 Tax=Magnoliophyta RepID=Q588V7_ARATH Length = 2154 Score = 464 bits (1195), Expect = e-129, Method: Composition-based stats. Identities = 176/686 (25%), Positives = 291/686 (42%), Gaps = 106/686 (15%) Query: 339 LKAWIAKLEKAPVFAFDTETDSLDNIS----ANLVGLSFAIEPGVAAYIPVAHDYLDAPD 394 +++ A F FD + L +++ + G++ Y+ + D + Sbjct: 1468 FDSFLELWGSAGEFFFDLHYNKLQDLNSRISYEIHGIAICWNCSPVYYVNLNKDLPNLEC 1527 Query: 395 QISRERA-----------------------LELLKPLLEDEKALKVGQNLKYDRGILANY 431 ++ + ++ + K NLK +L + Sbjct: 1528 VEKQKLIEDAVIGKSEVLASHNMLDVIKSRWNKISKIMGNVNTRKFTWNLKVQIQVLKSP 1587 Query: 432 GIELRGI----------------------------AFDTMLESYILNSVAGRHD---MDS 460 I ++ D + +IL RH +D Sbjct: 1588 AISIQRCTRLNLPEGIRDELVDGSWLMMPPLHTSHTIDMSIVIWILWPDEERHSNPNIDK 1647 Query: 461 LAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHK 520 ++ L + +G+ +NQ+ A T L +W L + Sbjct: 1648 EVKKRLSPEAAEAANRSGRWRNQI------RRVAHNGCCRRVAQTRALCSALWKILVSEE 1701 Query: 521 GPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNL 580 L IEMPLV VL+ +E G+ ID + L +L LEKKA E+AG F+L Sbjct: 1702 -LLQALTTIEMPLVNVLADMELWGIGIDIEGCLRARNILRDKLRSLEKKAFELAGMTFSL 1760 Query: 581 SSTKQLQTILFEKQGIKPLKKTPGGA--PSTSEEVLEELALDYPLPKVILEYRGLAKLKS 638 + + +LF + + + G PST + L+ L ++P+ +I E+R LAKL + Sbjct: 1761 HNPADIANVLFGQLKLPIPENQSKGKLHPSTDKHCLDLLRNEHPVVPIIKEHRTLAKLLN 1820 Query: 639 TYTDKL--PLMINPKTGR--VHTSYHQAVTATGRLSSTDPNLQNIPVRNE---------- 684 + + T R +H + Q TATGRLS +PNLQ++ E Sbjct: 1821 CTLGSICSLAKLRLSTQRYTLHGRWLQTSTATGRLSIEEPNLQSVEHEVEFKLDKNGRDV 1880 Query: 685 ------EGRRIRQAFIA-PEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEG-KDIHRA 736 R F+ E++++++ADYSQIELR+MAH SRD L++ ++ D+ Sbjct: 1881 SSDADRYKINARDFFVPTQENWLLLTADYSQIELRLMAHFSRDSSLISKLSQPEGDVFTM 1940 Query: 737 TAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYP 796 AA+ G ++V+ R K + +G++YGM A LA QL EA++ + + +P Sbjct: 1941 IAAKWTGKAEDSVSPHDRDQTKRLIYGILYGMGANRLAEQLECTSDEAKEKIRSFKSSFP 2000 Query: 797 GVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADII 856 V ++ T + +E+GY++TL GRR +L IK N ++ A+R A+N+ QG+AADII Sbjct: 2001 AVTSWLNETISFCQEKGYIQTLKGRRRFLSKIKFGNAKEKSKAQRQAVNSMCQGSAADII 2060 Query: 857 KRAMIAVDAWLQAE-----------------QPRVRMIMQVHDELVFEVHKDDVDAVAKQ 899 K AMI + + + + + R R+++QVHDELV EV V A Sbjct: 2061 KIAMINIYSAIAEDVDTAASSSSSETRFHMLKGRCRILLQVHDELVLEVDPSYVKLAAML 2120 Query: 900 IHQLMENCTRLDVPLLVEVGSGENWD 925 + MEN L VPL V++ G+ W Sbjct: 2121 LQTSMENAVSLLVPLHVKLKVGKTWG 2146 >UniRef50_O18475 FI03732p n=5 Tax=melanogaster subgroup RepID=O18475_DROME Length = 2059 Score = 464 bits (1193), Expect = e-128, Method: Composition-based stats. Identities = 162/581 (27%), Positives = 275/581 (47%), Gaps = 36/581 (6%) Query: 368 LVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGI 427 + G+SF + VA Y + D A + ++ L L+ + V + K + Sbjct: 1487 ISGVSFCLADNVAYYWNMQIDERAAYQGVPTPLKVQELCNLMARKDLTLVMHDGKEQLKM 1546 Query: 428 LANYGIELRGI---AFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQL 484 L +L+ I D + +++L + ++ + + T + G G+ Sbjct: 1547 LRKAIPQLKRISAKLEDAKVANWLLQPDKTV-NFLNMCQTFAPECTG-LANLCGSGRGYS 1604 Query: 485 TFNQIALEEAGRYA--AEDADVTLQLHLKMWPDLQK--HKGPLNVFENIEMPLVPVLSRI 540 ++ A ++ VTL + +L + + L F +IEMP+ L ++ Sbjct: 1605 SYGLDTSSAILPRIRTAIESCVTLHILQGQTENLSRIGNGDLLKFFHDIEMPIQLTLCQM 1664 Query: 541 ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK 600 E G + L + + + ++E K +E G FNL S++ + +L L Sbjct: 1665 ELVGFPAQKQRLQQLYQRMVAVMKKVETKIYEQHGSRFNLGSSQAVAKVL-------GLH 1717 Query: 601 KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 + G +TS +VLE+L + P+ +IL YR L+ L + L + R+H Sbjct: 1718 RKAKGRVTTSRQVLEKL--NSPISHLILGYRKLSGLLAKSIQPLME--CCQADRIHGQ-S 1772 Query: 661 QAVTATGRLSSTDPNLQNIPVRNEE-------GRRIRQAFIA-PEDYVIVSADYSQIELR 712 TATGR+S T+PNLQN+ R F+ E ++SAD+ Q+E+R Sbjct: 1773 ITYTATGRISMTEPNLQNVAKEFSIQVGSDVVHISCRSPFMPTDESRCLLSADFCQLEMR 1832 Query: 713 IMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFG 772 I+AH+S+DK LL +D+ A AA + VT + R S K + +G++YGM Sbjct: 1833 ILAHMSQDKALLEVMKSSQDLFIAIAAHWNKIEESEVTQDLRNSTKQVCYGIVYGMGMRS 1892 Query: 773 LARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSN 832 LA LN +EA+ D + + Y G+ +Y R A+ +G+VET+ GRR YL +I S Sbjct: 1893 LAESLNCSEQEARMISDQFHQAYKGIRDYTTRVVNFARSKGFVETITGRRRYLENINSDV 1952 Query: 833 GARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPR-------VRMIMQVHDELV 885 + AER A+N+ +QG+AADI K A++ ++ ++ + + V ++M +HDEL+ Sbjct: 1953 EHLKNQAERQAVNSTIQGSAADIAKNAILKMEKNIERYREKLALGDNSVDLVMHLHDELI 2012 Query: 886 FEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQ 926 FEV +AK + MENC +L VPL V++ G +W + Sbjct: 2013 FEVPTGKAKKIAKVLSLTMENCVKLSVPLKVKLRIGRSWGE 2053 >UniRef50_A7AQX3 DNA polymerase I, putative n=1 Tax=Babesia bovis RepID=A7AQX3_BABBO Length = 1613 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 163/610 (26%), Positives = 279/610 (45%), Gaps = 53/610 (8%) Query: 333 ILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDA 392 + + E+L++ E + D ET L++ + L + + I V + Sbjct: 1040 VNNPESLESLAPLFEHTKLCTLDIETTGLNHREDRIRLLQISTPDQPSVVIDVFKVPVPT 1099 Query: 393 PDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSV 452 + + L + + KV N K+D L++ G ++G FDTM+ + +L++ Sbjct: 1100 LKECTWLVKLLGSQAV-------KVLHNGKFDINFLSHNGFNVKGPIFDTMIAAKLLSAT 1152 Query: 453 AGRHD--MDSLAERWLKHKTITFEEIAGKGKNQLTFNQIAL-EEAGRYAAEDADVTLQLH 509 + +AER+L + K + + L EE YA+ D V L L+ Sbjct: 1153 RFNWSCKLGHVAERYLNI-------VLDKSQQFSDWTLDPLFEEQVIYASRDTAVLLPLY 1205 Query: 510 LKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKK 569 + L+ + L++ +IE V + ++E+NG+K+D L + L K Sbjct: 1206 FILQEKLKAER--LDMIADIENKCVLAVCQMEQNGIKVDLDKLKSLQAALDKENETAMKH 1263 Query: 570 AHEIAG----EEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPK 625 + G FN +S +Q+ L Q K + KT G + E +P + Sbjct: 1264 LGDTLGVSSNPNFNYNSQRQILQAL---QQQKVMDKTRRGLIQDTSERTLSRNTYHPAIQ 1320 Query: 626 VILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEE 685 + EYR K + +T+K+P I+ TGR++ + +Q +GR S +PNLQ IP + Sbjct: 1321 ALREYRKTNKAVTAFTEKIPNHIDSATGRIYPNINQIGAESGRFSCDNPNLQQIPRDS-- 1378 Query: 686 GRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLP 745 R R+ FIA + +V AD+SQIELRI A ++ D+ ++ A+ G+D+H TA+ V P Sbjct: 1379 --RFRECFIADKGNKLVIADFSQIELRIAADIAEDRRMIEAYNSGEDLHSLTASLVKNKP 1436 Query: 746 LETVTSEQRRSAKAINFGLIYGMSAFGLARQLN------IPRKEAQKYMDLYFERYPGVL 799 + VT E+R+ AKA+NFGLI+GMS G + A++ D +F+ Y G+ Sbjct: 1437 ISEVTKEERQLAKAVNFGLIFGMSLAGFRNYAESCYGVVLSVPAAREIYDSFFKSYSGIT 1496 Query: 800 EYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRA 859 + ER + A + V TL R + ++N P+QGT+ADI K A Sbjct: 1497 AWHERMK--AAKPISVRTLSNRLSVF----------DQFSFTRSLNYPVQGTSADITKEA 1544 Query: 860 MIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTR--LD-VPLLV 916 M + + +MI+ +HDE++ EV + + + + + + ME L VP Sbjct: 1545 MALLVDRVA--DISGKMILCIHDEIILEVPESNANKALEVLIETMETAGNKFLRYVPCKA 1602 Query: 917 EVGSGENWDQ 926 G++W + Sbjct: 1603 MGSIGDSWAE 1612 >UniRef50_A9U2H4 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U2H4_PHYPA Length = 1683 Score = 459 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 179/727 (24%), Positives = 299/727 (41%), Gaps = 103/727 (14%) Query: 292 EAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPV 351 E+ LQ + P+ + Q + P+ + D + ++ + + Sbjct: 959 ESDLLLQKLESIPSFRVQNSKDPISTPDEVPSRGPRDVDKLV---GGFDEFLRRWQGVDE 1015 Query: 352 FAFDTETDSLD---NISANLVGLSFAIEPGVAAYIPVA--HDYLDAPDQ----------- 395 FAFD + ++G++ + Y+ ++ H Sbjct: 1016 FAFDFYFRTPRKGLPDPFEVMGVAICWKDSPVYYVNLSIVHKSFQHATNPNCGNKEVIIR 1075 Query: 396 ------ISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRG------------ 437 I + + +L K+ +LK +L N G+ + Sbjct: 1076 EVNSSLIESQTRWRHVGTMLSKTGVRKISWDLKIQLQVLNNPGLHVPSARQTTEHERGVP 1135 Query: 438 -------------------IAFDTMLESYILNSVAGRH---DMDSLAERWLKHKTITFEE 475 DT + +++L ++ ++ L + Sbjct: 1136 DVKAREGEVVALPSIRVQMPCIDTRVAAWLLWPDEESTRLLSLEQEVKKRLPGEIAAAAG 1195 Query: 476 IAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVP 535 AG+ NQ+ A LH W L G +EMPLV Sbjct: 1196 RAGRWANQMGC------VAHNGCCRRVAQIWVLHCAFWKLLVAE-GLHEALLQLEMPLVR 1248 Query: 536 VLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG 595 VL+ +E + +D +V L +L ELE + ++AG F+LS+ ++ +L+ Sbjct: 1249 VLADMETWSLGLDMRVCRKAQSHLHCKLRELEAQGEKLAGMSFSLSAPAEVAHVLYRHLK 1308 Query: 596 IKPLKKTPGGA-PSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINP---- 650 + G PST ++ LE L +P+ +I E+R L+KL + + Sbjct: 1309 LPVPPGCKGKHHPSTDKQALEFLRNHHPIADIIKEHRSLSKLLQSTLGSIIAWAKSPEPL 1368 Query: 651 -----KTGR-----VHTSYHQAVTATGRLSSTDPNLQNIPV----RNEEGRRI------- 689 ++ R + + Q TATGRLS DPNLQ + E GR + Sbjct: 1369 FSSQERSSRGEIFSIAGHWLQTSTATGRLSMEDPNLQCVEHAVSFTIEGGRSLDGDQEKA 1428 Query: 690 --------RQAFIA-PEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEG-KDIHRATAA 739 RQAF+ E ++++SADYSQIELR+MAH S D L++ + D+ R AA Sbjct: 1429 NNVVEVNARQAFVPSQEGWILLSADYSQIELRLMAHFSGDPSLVSLLSHPTGDLFRVLAA 1488 Query: 740 EVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVL 799 + GLP+ V+ +QR K + +G++YGM LA L P EAQ ++ + +P V Sbjct: 1489 QWTGLPMCEVSDKQRERTKRLVYGILYGMGVNTLAEHLECPVAEAQVMLERFKGTFPLVT 1548 Query: 800 EYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRA 859 ++ +++GY+ TL GR+ YL I + +A AER A+N+ QG+AAD+IK A Sbjct: 1549 TWLSHAVDSCRQKGYITTLSGRKRYLDKINTGKWGEQAKAERQAVNSICQGSAADLIKLA 1608 Query: 860 MIAVDAWL-QAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEV 918 MI V + + Q R+++Q+HDEL+ EV K + VA+ + ME L VPL ++ Sbjct: 1609 MIKVHDAISSSHQGSCRLLLQIHDELLLEVDKRVLKHVAQILRSSMEGAITLRVPLRTKL 1668 Query: 919 GSGENWD 925 G +W Sbjct: 1669 QVGTSWG 1675 >UniRef50_Q1ARA6 DNA polymerase I n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ARA6_RUBXD Length = 582 Score = 457 bits (1177), Expect = e-127, Method: Composition-based stats. Identities = 195/614 (31%), Positives = 286/614 (46%), Gaps = 58/614 (9%) Query: 329 NYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHD 388 + I E L+ L A D E L + A + L A G + V Sbjct: 7 AFRLITGPEGLREAARALAGARRVGLDIEATGLSPLDARMRLLQLA-AGGETFVVDV--- 62 Query: 389 YLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGIL-ANYGIELRGIAFDTMLESY 447 + D ALE LKV N KYD L A +GI L FDTML + Sbjct: 63 -FEVKDLSPLREALE--------GGPLKVLHNAKYDYSFLLAQHGIRLS-PLFDTMLAAQ 112 Query: 448 ILNSVA--GRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVT 505 +L+ + ++++A R+L +E K + +++ E YAA DA + Sbjct: 113 LLDGGEQGPSYSLEAVAGRYL-------QETVDKTARREDWSKELSREQLEYAARDAAIL 165 Query: 506 LQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAE 565 L LH ++ L++ L IE VP ++ +E G+++D + + R E Sbjct: 166 LPLHERLQELLEREG--LGPVSRIEFGAVPAIAEMELAGIRLDVRRWRELERVVRRRRDE 223 Query: 566 LEKKAHEIA------------GEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEV 613 ++ G NL+S +Q+ + P T Sbjct: 224 AARRLESHFPQPEGVLPLEGLGPRLNLNSPQQIMEAF---------RSIGIELPDTRMWT 274 Query: 614 LEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTD 673 L L +D+P + +LEYR L K TY + ++PKTGR+H S+ Q TGRL+ T+ Sbjct: 275 L--LTVDHPAARDLLEYRELQKKLGTYLETYEGFVHPKTGRIHASFLQCRVPTGRLACTN 332 Query: 674 PNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDI 733 PN+Q IP +E R+ F+A E V+V ADYSQIELRI+A +S D G + AF G+D+ Sbjct: 333 PNVQQIPHEDE----FRRCFVAGEGNVLVIADYSQIELRILAEVSGDPGFVEAFRRGEDL 388 Query: 734 HRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFE 793 HR TAA +FG+P E VT EQR +AK INFGL YG LA QL + A++ +D YF Sbjct: 389 HRVTAATMFGVPKEEVTKEQRSAAKRINFGLAYGRGPRSLAAQLGTDEERARRLIDEYFA 448 Query: 794 RYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAA 853 Y V Y+ T +A ++G + TL GR + + A R A +R A+N P+QGT+A Sbjct: 449 TYGRVQRYLNETANRALKEGALRTLSGRLRKFGRTRGLSSAERGALKREAMNYPIQGTSA 508 Query: 854 DIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTR---L 910 DI K A+I + + L+ R+I +HDE V E ++ + A ++ M Sbjct: 509 DIAKLALIFIHSELR--DLDARLINCIHDEFVVECAEEQAEEAASRVRSAMVRAGERLLK 566 Query: 911 DVPLLVEVGSGENW 924 VP+ VEV W Sbjct: 567 RVPVEVEVAVSREW 580 >UniRef50_O75417 DNA polymerase theta n=30 Tax=Deuterostomia RepID=DPOLQ_HUMAN Length = 1762 Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats. Identities = 173/686 (25%), Positives = 285/686 (41%), Gaps = 128/686 (18%) Query: 368 LVGLSFAIEPGVAAYIPVAHDYLDAPDQISRE--------------RALELLKPLLEDEK 413 +VGL+ A Y + + + S L+ D++ Sbjct: 1072 VVGLAVCWGGRDAYYFSLQKEQKHSEISASLVPPSLDPSLTLKDRMWYLQSCLRKESDKE 1131 Query: 414 ALKVGQNLKYDRGILA-NYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTIT 472 V + IL + GI L D + ++L+ + + S+ +L H+ Sbjct: 1132 CSVVIYDFIQSYKILLLSCGISLEQSYEDPKVACWLLDPDSQEPTLHSIVTSFLPHELPL 1191 Query: 473 FEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMP 532 E + Q E +GRY A + + + L + + +VF +EMP Sbjct: 1192 LEGMETSQGIQSLGLNAGSEHSGRYRASVESILIFNSMNQLNSLLQKENLQDVFRKVEMP 1251 Query: 533 LVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFE 592 L+ +E NG+ + + +L +E +A+++AG F+ +S+ + +LF Sbjct: 1252 SQYCLALLELNGIGFSTAECESQKHIMQAKLDAIETQAYQLAGHSFSFTSSDDIAEVLFL 1311 Query: 593 KQGIKPLKKTPG-----------------------GAPSTSEEVLEELALDYPLPKVILE 629 + + P ++ STS++VL +L +PLP +ILE Sbjct: 1312 ELKLPPNREMKNQGSKKTLGSTRRGIDNGRKLRLGRQFSTSKDVLNKLKALHPLPGLILE 1371 Query: 630 YRGLAKLKSTYTDKLPLMINPK----TGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNE- 684 +R + + L R++ Q+ TATGR++ T+PN+QN+P E Sbjct: 1372 WRRITNAITKVVFPLQREKCLNPFLGMERIYP-VSQSHTATGRITFTEPNIQNVPRDFEI 1430 Query: 685 ---------------------------------------------------EGRRIRQAF 693 +R AF Sbjct: 1431 KMPTLVGESPPSQAVGKGLLPMGRGKYKKGFSVNPRCQAQMEERAADRGMPFSISMRHAF 1490 Query: 694 IAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQ 753 + I++ADYSQ+ELRI+AHLS D+ L+ G D+ R+ AAE + E+V + Sbjct: 1491 VPFPGGSILAADYSQLELRILAHLSHDRRLIQVLNTGADVFRSIAAEWKMIEPESVGDDL 1550 Query: 754 RRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQG 813 R+ AK I +G+IYGM A L Q+ I +A Y+D + RY G+ ++M T K G Sbjct: 1551 RQQAKQICYGIIYGMGAKSLGEQMGIKENDAACYIDSFKSRYTGINQFMTETVKNCKRDG 1610 Query: 814 YVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPR 873 +V+T+ GRR YLP IK +N R+A AER AIN +QG+AADI+K A + + L+ Sbjct: 1611 FVQTILGRRRYLPGIKDNNPYRKAHAERQAINTIVQGSAADIVKIATVNIQKQLETFHST 1670 Query: 874 VR---------------------------------MIMQVHDELVFEVHKDDVDAVAKQI 900 + I+Q+HDEL++EV ++DV VA+ + Sbjct: 1671 FKSHGHREGMLQSDRTGLSRKRKLQGMFCPIRGGFFILQLHDELLYEVVEEDVVQVAQIV 1730 Query: 901 HQLMENCTRLDVPLLVEVGSGENWDQ 926 ME+ +L V L V+V G +W + Sbjct: 1731 KNEMESAVKLSVKLKVKVKIGASWGE 1756 >UniRef50_B4AHF3 DNA polymerase I n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AHF3_BACPU Length = 744 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 199/630 (31%), Positives = 313/630 (49%), Gaps = 35/630 (5%) Query: 311 TSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVG 370 + E + +NY I DE+ L ++A LE FD ET +D + +VG Sbjct: 96 QAQNREDKLRKMVEETPENYWLITDEKRLAEFVALLENEEEIVFDVETTGVDVWNDYIVG 155 Query: 371 -LSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILA 429 + AI+ V AYIP H + Q+SR+ E L+P ED K+ N K+D +L Sbjct: 156 HVITAIKADVHAYIPTRHKTILP--QLSRDLVNETLRPFYEDPTVGKLAHNAKFDIHMLD 213 Query: 430 NYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQI 489 GI+LRG+ +DT +LN + +L ++L+ ++ T+ ++ GK + F+++ Sbjct: 214 REGIKLRGLTWDTQEAMRLLNENEPSFALKNLVTKYLRIESSTYGDLFGK----IGFDEV 269 Query: 490 -ALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKID 548 LE A YAA+D DVTL+L L K L +E +E+PL+ V+ ++E G ID Sbjct: 270 DDLEIALAYAAKDGDVTLKLRNFQREHLAKMPEVLRYYETVEVPLISVVQQMETTGFDID 329 Query: 549 PKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPS 608 + EL L L + E G + N++S QL+ L + T S Sbjct: 330 LDYAEEYGRELKSGLDRLYDELIEELG-DVNINSPAQLKPAL--------ERVTGESLAS 380 Query: 609 TS-EEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATG 667 T ++VL+ LA YP+ K +LEY+ KL STY + LP +I+ KTG+++T+++ TG Sbjct: 381 TDAKKVLKPLAKKYPVVKKLLEYKDSFKLYSTYINALPELIDQKTGKLYTNFNPNGAKTG 440 Query: 668 RLSS--TDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLT 725 R SS T NLQN P ++ R+ F+APE Y I+ D+SQ E R +A+ ++D L+ Sbjct: 441 RFSSGGTGVNLQNQP------KKARKLFVAPEGYAILGGDWSQQEYRCLAYFTQDPKLVD 494 Query: 726 AFAEGKDIHRATAAEVFGLPLETVTSEQ--RRSAKAINFGLIYGMSAFGLARQLNIPRKE 783 + G D++ + AAEVFG P+E R+ AK I + YG A L + + + E Sbjct: 495 NYFRGDDLYASIAAEVFGKPIEECGDGSVYRKQAKVIMLAVAYGGGANMLKDAIGVEKHE 554 Query: 784 AQKYMDLYFERYPGVLEYMERTRAQAKEQGYV-ETLDGRRLYLPDIKSSNGA-RRAAAER 841 AQK++D +FER+P V E++E + K+ G+V R+ LPD K + +A Sbjct: 555 AQKFLDSFFERFPVVKEWVESNQKFVKKHGFVWMDHLQRKRRLPDAKDRSAKGHYSAVFT 614 Query: 842 AAINAPMQGTAADIIKRAMIAVDAWLQAE----QPRVRMIMQVHDELVFEVHKDDVDAVA 897 + NA +QG+AA K MIA+ + + R+ VHDE + V Sbjct: 615 QSTNARVQGSAAIQTKATMIALQELCDRKTAEGRGEWRLWCVVHDEALLLVPDTLTQQDV 674 Query: 898 KQIHQLMENCTRL-DVPLLVEVGSGENWDQ 926 K +M N ++P ++ W + Sbjct: 675 KDFEDVMVNTYVFGNIPNKTDIEISRRWGE 704 >UniRef50_UPI000180C99B PREDICTED: similar to DNA polymerase theta n=1 Tax=Ciona intestinalis RepID=UPI000180C99B Length = 1711 Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats. Identities = 174/677 (25%), Positives = 301/677 (44%), Gaps = 58/677 (8%) Query: 286 RWTADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTI--LDEETLKAWI 343 R + D+ + + + A+ + T + + +D E L + Sbjct: 1046 RMSLDLFQTSFNDSVDQQKASPDMQVRKPKIPSWYTNIELKPGEKYKVFNIDHEKLSDFF 1105 Query: 344 AKLEKAPVFAFDTET-DSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERAL 402 FAF LVGLS P V Y+ + P + Sbjct: 1106 HIWANETKFAFSVNVQTCTSEKDPKLVGLSLCWSPTVVYYLDIQILKTRHPS------VI 1159 Query: 403 ELLKPLLE--DEKALKVGQNLKYDRGILAN---YGIELRGIAFDTMLESYILNSVAGRHD 457 E ++ + E DE +++ +K + N +G+ D M+ S++++ + Sbjct: 1160 EDIQNIFESFDEDVIQIAFCIKDQFKWMLNSGVHGVTTSNNWQDPMIASWLMDPDNIKQG 1219 Query: 458 MDSLAERWLKHKTITFEEI-AGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDL 516 + SL E + F++ N+ ++ ++ E+ ++ + L L++ L Sbjct: 1220 LFSLVEHYCSEHLYLFQDTKYDWDVNRPSYTSVSSEKV---CCVESIASYILMLQLEEQL 1276 Query: 517 QKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGE 576 F +EMP + ++ +E NG+++D +L + EL L++KA +I G Sbjct: 1277 SGM-NMWQHFTGVEMPHMYCVALLELNGIEVDNSLLKRYRLELHSASLALQEKAWKILGR 1335 Query: 577 EFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKL 636 +FNLS+ K++ +LF++ + YP I+ +R + Sbjct: 1336 KFNLSNPKEVSKVLFQELRLXXXXXXXXXXX-------XXXXXXYP---CIMSWRTVNYA 1385 Query: 637 KSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPV------------RNE 684 + L + P GR+H +T TGR+ ++PN+Q+IP +E Sbjct: 1386 LNKVIL-LINSLPPSCGRLHHKCL-TLTNTGRMIMSEPNIQSIPKQFSITKGSKSEADSE 1443 Query: 685 EGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAE-GKDIHRATAAEVFG 743 + +R F+A +++SADYSQIELRI+AHLS D+ L+ AF G DI ++ AA + Sbjct: 1444 QSFCLRNIFVAGNGKLLISADYSQIELRILAHLSGDETLIAAFNSSGVDIFKSIAAMFYS 1503 Query: 744 L--PLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEY 801 ++ VT +QR + K +G++YGM A LA+Q+N +AQ MD + YP V Y Sbjct: 1504 EISSIDDVTDKQRDTTKQTCYGILYGMGAQTLAQQMNTSETDAQNAMDSFMNSYPMVKVY 1563 Query: 802 MERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMI 861 R AQ KE+GY+ET+ GRR YLP+IKS R+ AER A+N+ +QG+AADI+K A Sbjct: 1564 FNRLVAQCKEKGYIETISGRRRYLPEIKSVRLKMRSHAERQAVNSTIQGSAADIVKMATY 1623 Query: 862 AVDAWLQAEQPR------------VRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTR 909 + + + ++ +HDEL++EV + + I + M + Sbjct: 1624 KIHCAVASLGWNTLHQNTRSNTTDFFLVHHIHDELIYEVDEKKLHEAVSVIERCMVDAFP 1683 Query: 910 LDVPLLVEVGSGENWDQ 926 + V L V + G+ W Sbjct: 1684 MSVKLAVRIKVGKLWGD 1700 >UniRef50_UPI0000D572BA PREDICTED: similar to DNA polymerase theta n=1 Tax=Tribolium castaneum RepID=UPI0000D572BA Length = 1588 Score = 454 bits (1168), Expect = e-126, Method: Composition-based stats. Identities = 181/663 (27%), Positives = 306/663 (46%), Gaps = 70/663 (10%) Query: 288 TADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLE 347 A L + G A P E+ + T +S++ + I LE Sbjct: 964 WAVKTNDISLNSTGDVIVASPDESYSFKTPKKRTKRRLSHE------TPVKKQRTIFNLE 1017 Query: 348 KAPVFAFDTETDSLDN--ISANLVGLSFAIEPGV------------AAYIPV-------A 386 V A D DS + SANLV L+FA P + +P+ Sbjct: 1018 TVDVCAHDLLFDSFRHEIKSANLVALAFASCPTKQGRTIGLNHTIKSPEVPISGFALFWG 1077 Query: 387 HDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGIL-ANYGIELRGIAFDTMLE 445 H D + ++L++ ++ +++ + N K L +G+E R D + Sbjct: 1078 HSTAYYLDVAKKRETIDLIRHIVNEQQKTIIMYNCKQQIKTLHKWHGVEFRSRVHDPKVA 1137 Query: 446 SYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVT 505 ++L + L E + + G+ + + ++ Sbjct: 1138 DWLLQPEGQDKTLHQLVETYCPELPLD----QGQDAKLRSIFE-------------CYLS 1180 Query: 506 LQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAE 565 + + +L K L VF + EM ++ +L+ IE G+ + L N + LT L Sbjct: 1181 WHVLKNIEVELSKS-NLLTVF-DTEMSIMRILANIELAGIGANVSTLSNLVDLLTRELKA 1238 Query: 566 LEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPK 625 +E++ H IAG F+ +S++QL IL S++ L++ D PL Sbjct: 1239 IERQGHAIAGRHFSFASSRQLAKILQSDNN--------------SKKSLQK--NDNPLAS 1282 Query: 626 VILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEE 685 +IL++R ++ L ++ + GR+ Y TATGR++ +PNLQN+ + Sbjct: 1283 LILKWRKISATIGKTLQPLIRLV--ENGRIFGCY-VTHTATGRITMHEPNLQNVAKDFDI 1339 Query: 686 G---RRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVF 742 R+AF+ + +V+VSAD+ Q+ELR++AHLSRD+ L DI RA AA+ Sbjct: 1340 DGVEVSCRKAFVPSQGHVMVSADFCQLELRVLAHLSRDEVLGGILRRKGDIFRAIAAKWN 1399 Query: 743 GLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYM 802 + VT E R+ AK I +G+IYGM + LA QLN +A ++M + YPGV +Y+ Sbjct: 1400 NISENEVTEELRQRAKQIIYGIIYGMGSKALAEQLNTDEAQATRFMQTFRNAYPGVQKYI 1459 Query: 803 ERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIA 862 ++ G+VETL GRR +L I NGA ++ AER A+N +QG+AAD++K AM+ Sbjct: 1460 SEIIETCRKTGFVETLAGRRRFLAHINHKNGAVKSQAERQAVNTTIQGSAADLVKMAMVR 1519 Query: 863 VDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGE 922 ++ E+ V++++ +HDEL++EV + + + + + ME +L +P V+V SG Sbjct: 1520 LETVFLGEK-EVKLVLHLHDELLYEVPEGSLGSFVRILKTEMEGSVKLSIPFPVKVKSGP 1578 Query: 923 NWD 925 +W Sbjct: 1579 SWG 1581 >UniRef50_Q299V6 GA19301 n=2 Tax=pseudoobscura subgroup RepID=Q299V6_DROPS Length = 2054 Score = 454 bits (1168), Expect = e-126, Method: Composition-based stats. Identities = 159/584 (27%), Positives = 275/584 (47%), Gaps = 49/584 (8%) Query: 368 LVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGI 427 + GLSF + V Y+ + + Q+ ++ L L++ + + + K Sbjct: 1493 IAGLSFCLADNVVYYMCMQ---EEEGQQVPTRLKVQELCKLMDRPELTLLVHDAKEQLKA 1549 Query: 428 LANYGI----ELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQ 483 L +G+ + D + +++L ++ +++ + + G G+ Sbjct: 1550 LL-HGVPQLHNIGIRVEDPKVGNWLLEPEKT-FSFKNMCQQFAP-ECTALANLCGSGRGY 1606 Query: 484 LT--FNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIE 541 + + + A+ +A VT+ + +L++ +EMP+ VL R+E Sbjct: 1607 SSHGLDSSSAILPKLRASIEACVTVHILKGQIENLER--------IEVEMPIQIVLCRME 1658 Query: 542 RNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKK 601 G + + + + L ++E K +++ G +FNL ST+ + +L L + Sbjct: 1659 CVGFPAKHQRMGRLIKHMLDTLNKVEIKIYKMHGSKFNLGSTQAVANVL-------GLHR 1711 Query: 602 TPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 661 P G STS +VLE+L P+ ++IL +R L L K R+H Sbjct: 1712 KPHGRVSTSRQVLEKLGS--PISELILNHRKLNMQIVKGMQPLIR--CCKANRIHGH-SI 1766 Query: 662 AVTATGRLSSTDPNLQNIPVRNEEG-------RRIRQAFIA-PEDYVIVSADYSQIELRI 713 TATGR+S ++PNLQN+ + R F + E ++SAD+ Q+E+RI Sbjct: 1767 THTATGRISMSEPNLQNVAKDFDIRMGPDSVRISCRSVFKSMDEKRCLLSADFCQLEMRI 1826 Query: 714 MAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGL 773 +AHLS+DK L++ +D+ A AA +P VT + R K I +G++YGM L Sbjct: 1827 LAHLSQDKALVSVMNSPQDLFTAIAAHWNHIPEAEVTEQMRSGTKQICYGIVYGMGMRSL 1886 Query: 774 ARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNG 833 L EAQ + + + YPG+ Y E+ A++ GYVET+ GRR YL I S Sbjct: 1887 GDALQCTESEAQLICEQFHQSYPGIRAYTEKVLKFARKLGYVETITGRRRYLDHINSGEQ 1946 Query: 834 ARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQA-------EQPRVRMIMQVHDELVF 886 AER A+N +QG+AADI KRA++ +D + E+ +++++ +HDELV+ Sbjct: 1947 NLIKQAERQAVNTTIQGSAADIAKRAILDMDKNIGRYWKKLGVEENSIQLVLHIHDELVY 2006 Query: 887 EVHKDDVDAVAKQIHQLMENC--TRLDVPLLVEVGSGENWDQAH 928 EV + +AK + ME+ +L VPL V++ GE+W + H Sbjct: 2007 EVPEAKAKRIAKFLGLTMESIGKGKLTVPLKVKIKMGESWGEMH 2050 >UniRef50_P30314 DNA polymerase n=4 Tax=Caudovirales RepID=DPOL_BPSP1 Length = 924 Score = 450 bits (1159), Expect = e-125, Method: Composition-based stats. Identities = 194/710 (27%), Positives = 323/710 (45%), Gaps = 80/710 (11%) Query: 291 VEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAP 350 + GK + A + + D E+ + ++D ET+K + Sbjct: 168 LLEGKTPKNVLAFTKERRYCDTFEDAIDEIKRYLELPAGSRVVIDLETVKT--NPFIEKV 225 Query: 351 VFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLE 410 T + +VG+ + G IP+ H + ++ L+ LLE Sbjct: 226 TMKKTTLEAYPMSQQPKIVGIGLSDRSGYGCAIPLYHRE-NLMKGNQIGTIVKFLRKLLE 284 Query: 411 DEKALKVGQNLKYDRGILAN-YGIELRGIAFDTMLESYILNSVAGRHDM-DSLAERWLKH 468 E + N K+D L I L +DTML +I++ R+ LA WL+ Sbjct: 285 REDLEFIAHNGKFDIRWLRASLDIYLDISIWDTMLI-HIIDYRGERYSWSKRLA--WLET 341 Query: 469 KTITFEEIAG----KGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLN 524 +++ KG+++ ++ I + Y A+D DVT +L K P +++++ Sbjct: 342 DMGGYDDALDGEKPKGEDEGNYDLIPWDILKVYLADDCDVTFRLSEKYIPLVEENEEKKW 401 Query: 525 VFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEI----------- 573 ++ENI +P L IE +G+ +D + L ++ LE K E Sbjct: 402 LWENIMVPGYYTLLDIEMDGIHVDREWLEVLRVSYEKEISRLEDKMREFPEGVAMEREMR 461 Query: 574 -----------------------------------AGEEFNLSSTKQLQTILFEKQGIKP 598 G++ N STKQL +LFE+ G++ Sbjct: 462 DKWKERVMIGNIKSANRTPEQQDKFKKYKKYDPSKGGDKINFGSTKQLGELLFERMGLET 521 Query: 599 LKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTS 658 + T GAPST+++ L+ + KV++E+R L + + KL LMI+P VH S Sbjct: 522 VIFTDKGAPSTNDDSLKFMGSQSDFVKVLMEFRKANHLYNNFVSKLSLMIDP-DNIVHPS 580 Query: 659 YHQAVTATGRLSSTDPNLQNIPVR------NEEGRRIRQAFIAP--EDYVIVSADYSQIE 710 Y+ T TGRLSS +PN Q P + + I++ F + + VIV DYSQ+E Sbjct: 581 YNIHGTVTGRLSSNEPNAQQFPRKVNTPTLFQYNFEIKKMFNSRFGDGGVIVQFDYSQLE 640 Query: 711 LRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSA 770 LRI+ + + G D+H+A A++ FG+ +E V+ +QR ++K I FG++Y SA Sbjct: 641 LRILVCYYSRPYTIDLYRSGADLHKAVASDAFGVAIEEVSKDQRTASKKIQFGIVYQESA 700 Query: 771 FGLARQLN-----IPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYL 825 GL+ L + E + ++ YF+R+P V +++ T+ K+ V+TL G L Sbjct: 701 RGLSEDLRAEGITMSEDECEIFIKKYFKRFPKVSKWIRDTKKHVKDISTVKTLTGATRNL 760 Query: 826 PDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELV 885 PDI S + ++ AER A+N P+QGT +D ++I ++ WL+ R R+ + VHD +V Sbjct: 761 PDIDSIDQSKANEAERQAVNTPIQGTGSDCTLMSLILINQWLRESGLRSRICITVHDSIV 820 Query: 886 FEVHKDDVDAVAKQIHQLMENCTRL--------DVPLLVEVGSGENWDQA 927 + KD+V VAK++ +MEN DVP+L E+ G N+ A Sbjct: 821 LDCPKDEVLEVAKKVKHIMENLGEYNEFYKFLGDVPILSEMEIGRNYGDA 870 >UniRef50_B3M1V8 GF17871 n=1 Tax=Drosophila ananassae RepID=B3M1V8_DROAN Length = 2135 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 159/578 (27%), Positives = 271/578 (46%), Gaps = 38/578 (6%) Query: 368 LVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGI 427 + LSF ++ Y+ + +S L+ + + V K + Sbjct: 1569 IDCLSFCVDSH---YVVHFKMQEEKGRGVSTSLKLQEISKIFARTDLTLVMHKTKDQLKV 1625 Query: 428 LANYGIELRGI---AFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQL 484 + EL+ I D + S+++ ++ +++ + + + G G Sbjct: 1626 ILQAIPELKTIAVKFEDPNVASWLMQPDRN-CSFQNMCQQYAP-ECLNLLNLCGSGLGYT 1683 Query: 485 TFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQ--KHKGPLNVFENIEMPLVPVLSRIER 542 ++ A E + + +H + ++ + + VF + EMPL +L+++E Sbjct: 1684 SYGLDASSEVSAQVRAQVEACVSVH-ILNGQMKSLEEHQFIKVFRDNEMPLCLILAQMEV 1742 Query: 543 NGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKT 602 G + L N ++ + +LE K E+ G FN++S++ + +L + + Sbjct: 1743 IGFPVKEHRLGNLISQIAGSMKKLEAKIFELNGSRFNINSSQAVAKVL-------GIHRK 1795 Query: 603 PGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQA 662 P G STS EVLE L + P+ +I +YR L L L R+H Sbjct: 1796 PTGRVSTSREVLERL--EAPIANLICQYRKLNALLVKNVQPLMK--CCLNNRIHGH-SIT 1850 Query: 663 VTATGRLSSTDPNLQNIPVRNEEGRR-------IRQAFIAPED-YVIVSADYSQIELRIM 714 TATGR+S +PNLQN+ + R AF+ + ++SAD+ Q+E+RI+ Sbjct: 1851 NTATGRISMAEPNLQNVAKNFVVDVQDRGAIVSCRSAFMPMDSTRCLLSADFCQLEMRIL 1910 Query: 715 AHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLA 774 AHLS+DK L+ A +DI + +A + V+ + R K I +G+IYGMS LA Sbjct: 1911 AHLSQDKALVAAMNSPRDIFTSISAHWHRMNESEVSDQLREGTKKICYGIIYGMSMRKLA 1970 Query: 775 RQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGA 834 +LN+ +EA+ + + YPG+ Y R A+ +GYVET+ GRR YL +I+S + Sbjct: 1971 DELNVTEQEAEVLSEQFHSNYPGIRSYTNRLIKYARHKGYVETITGRRRYLENIRSEDAG 2030 Query: 835 RRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAE-------QPRVRMIMQVHDELVFE 887 R AER A+N+ +QG+AADI K A+I +++ + V +++ +HDEL+FE Sbjct: 2031 TRKKAERQAVNSTIQGSAADIAKVAIIKSVKYMRRHCQKLFIDENSVNLVLHIHDELMFE 2090 Query: 888 VHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWD 925 V D +AK + +ME RL VPL V++ G W Sbjct: 2091 VPADKAKKIAKLLKVVMEASARLTVPLKVKLKMGSCWG 2128 >UniRef50_Q2QTK2 DNA polymerase I family protein, expressed n=4 Tax=Poaceae RepID=Q2QTK2_ORYSJ Length = 2065 Score = 444 bits (1142), Expect = e-123, Method: Composition-based stats. Identities = 170/647 (26%), Positives = 278/647 (42%), Gaps = 96/647 (14%) Query: 334 LDEETLKAWIAKLEKAPVFAFDTETDSLDNI----SANLVGLSFAIEPGVAAYIPVAHDY 389 +++ + F+FD +++GL+ E Y D Sbjct: 1411 NFPGGFDSFLDQWSTVSEFSFDLHYVKKSIKSSSTYFDILGLAVCWENSPVYYCNFPKDL 1470 Query: 390 LDAPDQISRERALELLKPL------LEDEKALKVGQNLKY-------------------- 423 + A S E EL + + K+ NLK+ Sbjct: 1471 MMAGSNDSIEMWDELTRRWNRVIEIMRQNSVKKMTWNLKFQIQALKYPCVSCQRLSRLHL 1530 Query: 424 DRGILANYGIELRGIAF----------DTMLESYILNSVAGRH---DMDSLAERWLKHKT 470 D +L N + F D L +++L +++ L +R L ++ Sbjct: 1531 DYKMLKNVEVLDNLYVFLQPVSVHSGLDICLVAWVLWPDEESKTVPNLEKLVKRRLHNEA 1590 Query: 471 ITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIE 530 G+ +NQ+ + A A T L + L + ++ E IE Sbjct: 1591 AAAANRDGRWRNQMH------KAAHNGCCRRAAQTRALCSVLR-KLLVSQNLNDLLETIE 1643 Query: 531 MPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTIL 590 PLV VL+ +E G+ D + +L ELEK+A+++AG+ F+L++T + +L Sbjct: 1644 GPLVNVLADMELWGIGADMDACLRARHIIIRKLKELEKEAYKLAGKSFSLNATADIADVL 1703 Query: 591 FEKQGIKPLKKTPGGA--PSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKL--PL 646 + + K G PST ++ L+ L +P+ VI E+R LAKL + + Sbjct: 1704 YTHLKLPVPKGCGKGKLHPSTDKQSLDHLRDQHPIISVIKEHRTLAKLLNGTLGSICSRA 1763 Query: 647 MINPKTGR--VHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSA 704 + K+ R + ++ Q TATGRLS +PNLQ E++++V+A Sbjct: 1764 QLCSKSQRYIIQGNWLQTSTATGRLSMEEPNLQ-------------------ENWLLVTA 1804 Query: 705 DYSQIELRIMAHLSRDKGLLTAFAE-GKDIHRATAAEVFGLPLETVTSEQRRSAKAINFG 763 DYSQIELR+MAH S+D L+ ++ D+ A+ G + S++R + K +G Sbjct: 1805 DYSQIELRLMAHFSKDTALIELLSKPDGDVFTMIASRWTGKAESLICSKERETTKRFIYG 1864 Query: 764 LIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRL 823 ++YGM A LA QL ++A + + + +PGV ++ A + +GYVETL GRR Sbjct: 1865 ILYGMGANSLAEQLECSPEDAAQKIQSFKRFFPGVSSWLHEAVASCRHKGYVETLMGRRR 1924 Query: 824 YLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAE------------- 870 +L I + N +A A+R A+N+ QG+AADIIK AMI V + + Sbjct: 1925 FLSKITAGNSKEKAKAQRQAVNSICQGSAADIIKVAMIKVHSAITNGSTVGATVDSIDVA 1984 Query: 871 -------QPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRL 910 + R +I+QVHDELV EV V + + +MEN L Sbjct: 1985 MQNFSEIRGRCHLILQVHDELVLEVDPCMVAEAVRLLQTVMENSASL 2031 >UniRef50_D0MZ95 DNA polymerase I, putative n=2 Tax=Phytophthora infestans T30-4 RepID=D0MZ95_PHYIN Length = 1054 Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats. Identities = 199/740 (26%), Positives = 310/740 (41%), Gaps = 147/740 (19%) Query: 332 TILDEETLKAWIAKLEKAPV---FAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAH- 387 I DEE + + KLE+ A DTE +D + VG + + V + Sbjct: 317 LIQDEEGARRVLQKLEELGPNHFHACDTEVAQIDVKAVGPVGNGVVTCLSLYSGPDVDYG 376 Query: 388 --DYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLE 445 Y+ + S E L+L K LE + LKV N +DR +L N+GI ++G+ DTM Sbjct: 377 NGPYVWVDNLDSAEGTLQLFKEFLESKNYLKVWHNYSFDRHVLFNHGINVQGLGGDTMHM 436 Query: 446 SYILNSVA---GRHDMDSLAERWLKHKTITFEEIAG---------KGKNQLTFNQIAL-- 491 + + N+ G + ++SL L + +E+ G KGK ++ L Sbjct: 437 ARLWNTARFQNGGYSLESLTADLLLQRKKPMKELFGIPKLKKDGSKGKERIMPTVEELQR 496 Query: 492 -----EEAGRYAAEDADVTLQLHLKMWPDLQKHKG-------------PLNVFENIEMPL 533 + RY+ DA+ T LH + L + + +P Sbjct: 497 FPEFRKRWIRYSVYDAESTWFLHRVLQDKLDQTFWFEKPNGGESQVGSMYEFYREYIVPF 556 Query: 534 VPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAG------EEFNLSSTKQLQ 587 L+ IER G+ +D + L ++ A LEK + A E NL S Q Q Sbjct: 557 GECLTDIERRGMHVDLEYLAGVEKQALEDRARLEKLVLQWASRYCEESERINLYSAAQKQ 616 Query: 588 TILF-------------------------------------------EKQGIKPLKKTPG 604 +LF GI P T Sbjct: 617 QLLFAPYFNKKKKEQVLPAERSFEVENTEGFIEEGKQKAKKKRNITIRGLGIPPTHFTAS 676 Query: 605 GAPSTSEEVLEELALDYPLP-------------------------KVILEYRGLAKLKST 639 G P+ S EVL++LA +P K + + + + + Sbjct: 677 GLPAASAEVLKDLAG-HPEANPPQYGRAYGHFEDKEEGAAACVALKALFDISSINTMLNN 735 Query: 640 YTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDY 699 + L + + RVH S + T TGRLSS PNLQN P ++ +IR AF AP Sbjct: 736 FILPLQELAD-SNSRVHCSLN-LNTDTGRLSSRKPNLQNQPAMGKDRYKIRDAFTAPPGK 793 Query: 700 VIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETV---------- 749 ++ ADYSQ+ELR+MAH+++ K ++ AF G D H TA ++ + V Sbjct: 794 KLIVADYSQLELRLMAHITQCKAMIEAFKAGGDFHSRTAMGMYPYVAKAVENGEALLEWD 853 Query: 750 ---------------TSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFER 794 ++R++AK +NF + YG +AFGLA+ N+ RKEA ++ ++ Sbjct: 854 HTTGKEPPAPLLKDKYGDERKNAKVLNFSIAYGKTAFGLAKDFNVSRKEAADTLEKWYSD 913 Query: 795 YPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGAR-----RAAAERAAINAPMQ 849 V ++ ++ A+ GY TL GR LPD + + R AERAAIN P+Q Sbjct: 914 RGEVRDWQKKAIETARTFGYTRTLLGRYRRLPDAMLRDDSMTSKKARGHAERAAINTPIQ 973 Query: 850 GTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTR 909 G AAD++ +AM+ V + + M+ Q+HDE++ E ++ VD K + LMEN + Sbjct: 974 GAAADVVMQAMLQVHHSPRLRELGWGMVSQIHDEIIVEGPEESVDEAMKLVVHLMENPFQ 1033 Query: 910 --LDVPLLVEVGSGENWDQA 927 L V L V+ ++W +A Sbjct: 1034 KPLSVALEVDANVDDSWFKA 1053 >UniRef50_A5X572 DNA polymerase nu n=8 Tax=Euteleostomi RepID=A5X572_DANRE Length = 1146 Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats. Identities = 157/550 (28%), Positives = 271/550 (49%), Gaps = 53/550 (9%) Query: 413 KALKVGQNLKYDRGILANYGIELR------GIAFDTMLESYILNSVAGRHDMDSLAERWL 466 V K + + +L D + +++L+ +L + Sbjct: 597 TKTFVCFKAKDLLRTVLRHFRDLSWTQVLGCQVMDPQIAAWLLDPADSSSCFQTLLSKHY 656 Query: 467 KHK--TITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLN 524 H+ T + + + K + ++ + +L ++ L + +G Sbjct: 657 THQFTPTTLQPVLEQAKVTQVISNLS-------------LLHKLMEELHYKL-RTQGLWQ 702 Query: 525 VFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTK 584 ++ IE ++PVL+ +E + +D + L SE L +L +LE++AH+ AG++F +SS+ Sbjct: 703 LYSGIEQKMIPVLAAMESYKMHVDKEALKKTSEMLGSKLKQLEQEAHQAAGQKFLVSSSA 762 Query: 585 QLQTILFEKQG------IKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKS 638 QL+ ILFEK K L KT STSE L +L +PLPK+ILEYR + K+K+ Sbjct: 763 QLRLILFEKLRLHELCENKKLPKTVKQQQSTSETALLQLQKLHPLPKIILEYRQIHKIKT 822 Query: 639 TYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPV---RNEEGRRI------ 689 T+ D + + + ++++Q T +GRLS+ PN Q +P + + + I Sbjct: 823 TFVDGILS--CTRKTFISSTWNQTSTVSGRLSAKHPNFQALPKLPLQISKKQYIHGKASD 880 Query: 690 ------RQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGK-DIHRATAAEVF 742 R FI E + +SAD+ Q+ELR++AHLS D LL F + D AA+ Sbjct: 881 IVTVHPRAMFIPREGWTFLSADFCQVELRLLAHLSADPQLLRIFQSPEADAFTMLAAQWK 940 Query: 743 GLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYM 802 G+ + V+ E R AK I + ++YG L+ L + +EA ++ D + + Y V ++ Sbjct: 941 GVSEDRVSLEDREQAKRIVYSVVYGAGRERLSGILGVSAEEASRFQDSFLKTYREVPAFI 1000 Query: 803 ERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIA 862 + T + G+V ++ GRR +LP I S++ + R AER A+N +QG+AAD+ K AMI Sbjct: 1001 QHTIQHCQSHGFVRSIMGRRRFLPHIHSADWSLRNQAERQAVNFVLQGSAADLAKLAMIR 1060 Query: 863 VDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMEN-------CTRLDVPLL 915 + + + ++ R++ Q+HDEL+FEV +D A + + ME+ L VPL Sbjct: 1061 ICSQVSSDSQTARLVAQIHDELLFEVEISQLDQFAALVKKTMESLQHIEYLNVNLSVPLK 1120 Query: 916 VEVGSGENWD 925 V + +G +W Sbjct: 1121 VLLSTGRSWG 1130 >UniRef50_C3ZGQ2 DNA polymerase I n=1 Tax=Branchiostoma floridae RepID=C3ZGQ2_BRAFL Length = 595 Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats. Identities = 174/578 (30%), Positives = 283/578 (48%), Gaps = 73/578 (12%) Query: 418 GQNLKYDRGILAN-YGIELRGIAFDTMLESYILNSVAGRHDMDSLAE-RWLKHKTITFEE 475 +LK LA I + G D + ++L+ A D + + ++ ++ + Sbjct: 14 VFDLKAQYKALAAGCDITMNGNFQDPKVADWLLDPDAKVKRFDEMVKGQFTPQESDLLQG 73 Query: 476 IAGK-GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLV 534 + G+ L+ AA + T L +K+ L + +G F N+EMP + Sbjct: 74 LRECFGEGSLSMTVQNAGSGQTRAALECVFTFHLMVKL-SKLLEEQGLSTAFRNVEMPSL 132 Query: 535 PVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEK- 593 L+R+E NG +P+ + + RL LE++AH++AG F L+STK + +L+E+ Sbjct: 133 VALARLELNGAGFNPEECETQCQVMKDRLRMLEERAHKLAGHTFALNSTKAVDKVLYEEK 192 Query: 594 ----QGIKPLKKTPGGAPSTSEE-VLEELALDYPL---PKVILEYRGLAKLKSTYTDKLP 645 P STS + VLE+L +PL P VIL+++ ++ L + L Sbjct: 193 KLEINEDPSTNSQPQERLSTSRKGVLEKLKTSHPLHPLPGVILKWKHISNLLNK-VTPLQ 251 Query: 646 L--MINPK--TGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNE----------------- 684 + NP+ R++++ + TATGR++ DPNLQ IP E Sbjct: 252 KKNVYNPRLNMDRIYSTCN-LHTATGRVAFHDPNLQFIPKEFEIEMPTDTNNEDGPPAAG 310 Query: 685 ------EGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATA 738 +R AFI + VI++ADYSQ+E+RIMAHLS+D L A G+D+ +A A Sbjct: 311 EETMSKRKVCMRHAFIPFKGGVILAADYSQLEVRIMAHLSKDSKLTQALNSGQDVFKAIA 370 Query: 739 AEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGV 798 ++ G+ +E V+ + R+ AK + +G+IYGM L +L + ++E ++ ++ + Y G+ Sbjct: 371 SQWKGVAVEHVSDKLRQQAKQLYYGIIYGMGPKTLGEKLGVSKEEGKRRIETFKSSYTGI 430 Query: 799 LEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKR 858 Y + T Q K GYV+T+ RR YLPDI + + + AER A N +QG+AAD++K+ Sbjct: 431 QRYRQTTVDQCKRNGYVQTMAERRRYLPDINGEDYYKLSQAERQAFNTTIQGSAADLVKK 490 Query: 859 AMIAVDAWLQAEQPRVR-------------------------------MIMQVHDELVFE 887 AM+ +D LQ E P R +I+Q+HDEL++E Sbjct: 491 AMVLIDQRLQQEFPDTRRSHRHGESTAAAADTDKRRSQQPSSPPRGAYLILQLHDELIYE 550 Query: 888 VHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWD 925 VH++D VA+ + ME L V L V+V G W Sbjct: 551 VHEEDEQKVAQIVKHKMEKAMELSVELPVKVKVGPTWG 588 >UniRef50_Q4RK95 Chromosome 18 SCAF15030, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4RK95_TETNG Length = 2382 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 173/725 (23%), Positives = 291/725 (40%), Gaps = 156/725 (21%) Query: 346 LEKAPVFAFDTETDSLDNISAN---LVGLSFAIEPGVAAYIPVAHDY-----------LD 391 + A D D + L+GL+ A YI + + Sbjct: 1664 WKPTKASAADQAVDGFPVRDQDGLVLIGLAVCWGSRDAYYISLQQEQSAGSFSSSLAPPP 1723 Query: 392 APDQISRERALELLKPLLEDE-----KALKVGQNLKYDRGIL-ANYGIELRGIAFDTMLE 445 D + L +K L + + ++ +L + GI L G D + Sbjct: 1724 LDDDLGLRERLAQVKTCLGQPSAHHGDRVLIAYDIIRTYKVLVLSCGISLEGSCEDPKVA 1783 Query: 446 SYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVT 505 ++L+ + + ++ + + + G G + ++ A+ + +T Sbjct: 1784 CWLLDPGSEERTLPNMVTVYCPEELPL---LGGLGSSHTHCPRV-------RASTASVLT 1833 Query: 506 LQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAE 565 + ++ L + G L+ F ++EMP L+ +E NGV + +LA Sbjct: 1834 YAVMGRLTG-LLREDGVLDHFRSVEMPSQVCLALLELNGVGFSAAECERQKHVMQAKLAA 1892 Query: 566 LEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKP--------LKKT-------------PG 604 LE +A+ +AG F+L+S + +LF + + P KKT G Sbjct: 1893 LEGQAYRLAGHSFSLTSVDDVAQVLFLELHLPPNGDVNGSKSKKTLGYGRRGGGGRVRLG 1952 Query: 605 GAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPK----TGRVHTSYH 660 ST+++VLE+L +PLP +ILE+R + + L R++ Sbjct: 1953 KQFSTTKDVLEKLRPLHPLPGLILEWRRITNALTKVVFPLQREKKHHSALSMDRIYP-IA 2011 Query: 661 QAVTATG-----------------------RLSSTDPNLQNIPVRNE------------- 684 Q TATG R+S T+PN+QN+P E Sbjct: 2012 QTHTATGNPQTPEPCETCNMRWLSLVLLPGRVSFTEPNIQNVPKDFEIQMATVVCESPPS 2071 Query: 685 -------------------------------EGRRIRQAFIAPEDYVIVSADYSQIELRI 713 +R AF+ +I++ADYSQ+ELR+ Sbjct: 2072 QDGRHLAARKGKKRRSAVPSGAAAGSEQGPAFSVSMRHAFVPFSGGMILAADYSQLELRV 2131 Query: 714 MAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGL 773 +AHLS+D+ LL G D+ R AAE + ++VT R+ AK I +G+IYGM A L Sbjct: 2132 LAHLSKDQRLLQVLNGGADVFRCIAAEWKSVDPDSVTDGLRQQAKQICYGIIYGMGAKSL 2191 Query: 774 ARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNG 833 Q+ + +A Y++ + RY G+ +++ T + GYV+TL GRR YLP I ++N Sbjct: 2192 GEQMGVEENDAACYIETFKSRYRGINAFLKETVKNCGKNGYVQTLMGRRRYLPGITNTNA 2251 Query: 834 ARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRV------------------- 874 +A AER A+N +QG+AADI+K A + + L+ P Sbjct: 2252 HVKAHAERQAVNTTVQGSAADIVKLATVNIQKRLRQTYPAAPLSHQHPAPVMGRFCGAGS 2311 Query: 875 -------------RMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSG 921 ++Q+HDEL++E +DV VA+ + + ME +L V + +V G Sbjct: 2312 SRRRAVTRHPRGGYFVLQLHDELIYETTDEDVIQVAQIVKREMETAVKLYVKMRAKVKVG 2371 Query: 922 ENWDQ 926 +W Sbjct: 2372 PSWGD 2376 >UniRef50_Q2NK60 DNA polymerase I n=5 Tax=Candidatus Phytoplasma RepID=Q2NK60_AYWBP Length = 847 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 184/917 (20%), Positives = 335/917 (36%), Gaps = 149/917 (16%) Query: 7 NPLILVDGSSYLYRAYHAF-----PPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVV 61 L+LVDG+S L+RAYHA P L N G T A+ + M ++ + K + V Sbjct: 2 KHLVLVDGNSLLFRAYHATASKYKPLLQNKKGIYTNALLSFIRMFEKILEETK-GYILVA 60 Query: 62 FDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTL 121 FD T R +L++ YK RP P L +QI + ++ +G+ A EADD+IGTL Sbjct: 61 FDTPKTTKRHQLYDAYKQGRPETPSALISQIPLIKQYLELIGVKYHAQDEYEADDIIGTL 120 Query: 122 AREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTN----TILGPEEVVNKYGVPPELII 177 A+EA V I + D D+ QLV IT+ P ++ +YG+ +I Sbjct: 121 AKEASNQNNTVSIYSSDCDLLQLVDKKITVCLLKKGLREIKYYTPTTLLEEYGLKEYQMI 180 Query: 178 DFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLE 237 D+ +L+GD SDNI GV G+G KTAQ LLQ LD L + I + + K++ Sbjct: 181 DYKSLIGDPSDNIKGVLGIGPKTAQKLLQEYDTLDNLMQNLDNIKPI-------LKTKIQ 233 Query: 238 QNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWL 297 ++ LS L I V L C Q E+Q + L +++ +F+R A Sbjct: 234 NSQTDLELSKILTAINLKVPLPFDCMQTEIQIRLEQNLKNFYEEMDFRRLAITKYARIEK 293 Query: 298 QAKGAKPAAKPQETSVADEAPEVTATVISYD----------------------------- 328 + K + V + + D Sbjct: 294 EINTTNKYNKEASLKAKEVQEAVKDSNLENDNNLNQTNQIRPIATTNNNDNNTPKVQEQG 353 Query: 329 --------NYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVA 380 +Y I D+ L ++ +++ ++A E + ++ + L G+ F+ Sbjct: 354 AKTPQINFHYQIIKDQNALNTFLDQIQPHEIWACFFELEKENDSNTFLQGIGFSNGNAHF 413 Query: 381 AYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAF 440 + A L+D K+ + + + L +L G+ F Sbjct: 414 FI------------DANLAFANNNFCNYLKDANFYKIVFHNQAIQFFLKTQHQQLNGVIF 461 Query: 441 DTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAE 500 D + SY+L + L+ I + N ++ + + A Sbjct: 462 DLICASYLLFPLKN-----------LEFSHIISKIDILNNTNYVSQLSQKILILEQKVAF 510 Query: 501 DADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELT 560 + + + ++ L K + L +F+ IE+PL VL+++E + ++ Sbjct: 511 KSFLLHAIKNSIFHYL-KAQNQLFLFQEIELPLSNVLAQLEY--------ETNLLQQKQI 561 Query: 561 LRLAELEKKAHE-IAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELAL 619 + +EK +E I ++ + T Q+Q EK + + L Sbjct: 562 IEANPIEKNIYEKIEMQQEKIPKTNQMQEQAQEK--------------DSDQNQYTNLKN 607 Query: 620 DYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNI 679 + I + + L + M K + + ++ +T N+Q Sbjct: 608 NQEQENQINQLKSLKDVFGYQNSFFLNMTKNKKTYNYLINDNFFCFSLKILATLGNIQ-- 665 Query: 680 PVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAA 739 +I+ F +++++ D+ L F Sbjct: 666 --------KIKNYFKIKKNHLL-----------------NDEQTLHFFVN---------- 690 Query: 740 EVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVL 799 P + + + ++ NF L + L +LNI AQ +++ Y ++ Sbjct: 691 ----EPTSEIKKDSQNLSETTNFCLDSWIKEILL--ELNISSNCAQDFINQYLSLDDEII 744 Query: 800 EYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRA 859 Y + Q KE+ Y TL R+++ N + + +Q D+ K A Sbjct: 745 NYYQNLLQQIKEKKYALTLLKRKVFF-----GNQKLTPNLDLETLYVFLQENILDMKKIA 799 Query: 860 MIAVDAWLQAEQPRVRM 876 ++ + L+ ++ Sbjct: 800 ILQLLRHLERHNENAKI 816 >UniRef50_C4Z601 DNA polymerase I n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z601_EUBE2 Length = 724 Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 166/705 (23%), Positives = 308/705 (43%), Gaps = 69/705 (9%) Query: 283 EFKRWTADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAW 342 + + ++ + K + + + + + Y I E LK Sbjct: 15 DLEDLSSRLAHKKVCNINLKRNQNTLLKGLEVINELVKSGRLHAEGEYEIIRTPERLKEV 74 Query: 343 IAK-LEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDA---PDQISR 398 + L + D ET LD + LVG+ + Y+P H L Q++ Sbjct: 75 METYLTGVSEYVLDVETTGLDVYNDILVGICLYNPDLPSFYVPFNHTDLQNKRVEGQMTE 134 Query: 399 ERALELLKPLLEDEKALKVGQNLKYDRGIL-ANYGIELRGIAFDTMLESYILNSVAGRHD 457 E ++ P L + + N+K+D ++ +G + + +DT + ++LN +H Sbjct: 135 EECKAVMLPYLANGSLKCINHNIKFDDKVVTFQWGQRIANVWWDTNIAGWVLNENE-KHG 193 Query: 458 MDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQ 517 + + +++ + + E+ G + N I ++ Y A D T L+ L+ Sbjct: 194 LKPMYNKYILNGEGSDED-FGDLFEGIPCNYIPIDIFAIYGANDGFKTWALYQFQKKYLR 252 Query: 518 KH------KGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAH 571 + + +VF +IEMPL+ V +E GV+I S + +AE EK Sbjct: 253 EDHPRADYRKLYHVFRDIEMPLIDVCMDMELRGVEIREDYAKELSVKFNAEMAEKEKLCD 312 Query: 572 EIAGE-------------------EFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEE 612 E + + N +S +Q+ + ++ +K + + T ++ Sbjct: 313 EYVAKFDKFIEENPTLMRLTKGTKKINYNSPQQVACLFYDIFKLKSVSRKEP--RGTGDK 370 Query: 613 VLEELALD---------YPLPKVI---LEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH 660 ++++ + + Y+ L TY DK+P + KT VHT+Y+ Sbjct: 371 IVQQHRNKAKKAGTKKGEEFIQFLDNYQRYKECGNLLGTYIDKIPEVKCAKTNAVHTTYN 430 Query: 661 QAVTATGRLSSTD----PNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAH 716 Q TGR SS+D NLQNIP + IR+ F A + Y V D+SQIE R++++ Sbjct: 431 QYGAKTGRFSSSDTVTKINLQNIPSHE---KSIRKIFRARDGYKFVGGDFSQIEPRVLSY 487 Query: 717 LSRDKGLLTAFAEGKDIHRATAAEVFGLPLET------------VTSEQRRSAKAINFGL 764 +S D+ + A+ EGKD++ ++V+G+P E +R + K++ G+ Sbjct: 488 VSGDEAMQEAYREGKDLYAIMGSKVYGVPYEDCREFYPDGTVNAEGKHRRTTMKSVLLGI 547 Query: 765 IYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLY 824 +Y A + Q + + AQK +D +++ +P + + + A+E GYV T+ GR+ Sbjct: 548 MYERGAKAIGEQFDRSAEWAQKLIDDFYKSFPKIQQLRLKVEKMAEEYGYVTTIQGRKRR 607 Query: 825 LPD--IKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHD 882 LP+ + + R A R ++NA +QG++ADI+K AMIA+ Q + M++ VHD Sbjct: 608 LPEMQLPDHDDYRYQEAHRQSLNAVIQGSSADIMKLAMIAIYNDPQYKALDCHMVITVHD 667 Query: 883 ELVFEVHKDDVDAVAKQIHQLMENCTR--LDVPLLVEVGSGENWD 925 EL+ EV +D + A + M+ +D+P+ V+ + W Sbjct: 668 ELIMEVPEDHIKEGADLLVNTMKRVGHSLIDLPMSVDAEVNDYWY 712 >UniRef50_B8FYE5 DNA-directed DNA polymerase n=2 Tax=Desulfitobacterium hafniense RepID=B8FYE5_DESHD Length = 583 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 170/625 (27%), Positives = 280/625 (44%), Gaps = 64/625 (10%) Query: 323 TVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAY 382 ++ + IL L ++ KL A V A DTET LD + L + A E Sbjct: 1 MDLNAMDIKRILHPADLVPYMEKLTAAKVIAVDTETTGLDPHTCQLRLIQLAAEDLPVLV 60 Query: 383 IPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDT 442 I EL+ +L KV QN K+D L I FDT Sbjct: 61 ID---------CFSFLPEGRELINAILSTSGV-KVFQNAKFDLQFLMALDI-FPPTLFDT 109 Query: 443 MLESYILNSVAGRH--DMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAE 500 ML S +L G ++ +LA+ +L EE + +LT +QI YAA Sbjct: 110 MLASQLLRGSGGPVQSNLKALAQHYLNEDLDK-EEQTSNWQGELTESQI------LYAAR 162 Query: 501 DADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELT 560 DA++ L+L M P + ++ L IE V ++ +E G+ +D + E+ Sbjct: 163 DAEILLRLRKVMIPQILENH--LTQIAEIEFRCVKAMAHLEYRGIYLDRQKWQELYEKTE 220 Query: 561 LRLAELEKKAHEIA----------GEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTS 610 + + GE+ ++ + Q + + +T+ Sbjct: 221 AERKTALDELYTYVERPLMQMSLWGEDVAINQNFESQQFVLNVLHEHGIP-----VAATA 275 Query: 611 EEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLS 670 ++ L +PL K +L YR AK S + +I+P TGR+H Y Q +GR+S Sbjct: 276 KQDLYPHRR-HPLVKTLLSYRKAAKSISAFLQPFTPLIHPVTGRLHPRYGQISAWSGRMS 334 Query: 671 STDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEG 730 +PN+Q IP +E R F AP ++ ADYSQIELR+ A +S D +++A+ +G Sbjct: 335 CWNPNIQQIPRDSE----FRACFAAPPGRKLILADYSQIELRVAAQISGDTRMISAYQQG 390 Query: 731 KDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQ------LNIPRKEA 784 +D+H TA+ V P+E ++ ++R++AKA+NFGLI+GM A GL + + + ++A Sbjct: 391 EDLHLLTASLVAHKPIEEISPQERQAAKAVNFGLIFGMGAPGLQQYAQQNYGVEMSLEQA 450 Query: 785 QKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAI 844 ++ + +F+ Y G+ + + +A ++G TL GR+ + G Sbjct: 451 TEFRERFFKAYTGIHRWHQSIKAHLPKEG--RTLAGRKFVYYEKAGLPGYY--------- 499 Query: 845 NAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLM 904 N P+QGTAADI+K+A+ + L ++ VHDE++ E ++ +A + M Sbjct: 500 NTPVQGTAADIVKKALGLLIERLA--GTDTYIVGIVHDEILLESPAEEAHTMAALLKSTM 557 Query: 905 ENCTR---LDVPLLVEVGSGENWDQ 926 E VP V+V E+W + Sbjct: 558 EEAANAILPKVPTKVDVLVSESWAE 582 >UniRef50_UPI0001C360F5 hypothetical protein ChatD1_13164 n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C360F5 Length = 626 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 173/661 (26%), Positives = 283/661 (42%), Gaps = 53/661 (8%) Query: 281 KYEFKRWTADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLK 340 + D LQ + E++ + + I L Sbjct: 1 MENVISQSNDRIEPPHLQTSLGAEINSGTPDLPLESGREISFSTDLSVEFRIISQPSDLT 60 Query: 341 AWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRER 400 + +++AP+ A DTET LD S L + + I A D + Sbjct: 61 PYFHTVKEAPLLAIDTETTGLDPHSDRLRLIQISAPGIPVLVIDCAAFLPDGFACL---- 116 Query: 401 ALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAG--RHDM 458 K LL K+ N ++D L GI+ FDTML + +L G + + Sbjct: 117 -----KELLNTPS-EKIFHNARFDLQFLMGIGIDCF-PVFDTMLAAQLLRPCGGPLKAGL 169 Query: 459 DSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQK 518 +A+ +L K E+ LT +Q+A YAA DA + L+L+ M P L + Sbjct: 170 AVVADHYLGIKLDKTEQTGSWDSASLTGSQLA------YAALDAWILLKLYDVMNPLLAR 223 Query: 519 HKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEE- 577 H +IE V ++R E +G+ +D + + + + + +G Sbjct: 224 HGLGRT--ASIEFACVSAIARTEYDGINLDLEKWDELRRKTEKQYDAALETLYTYSGTPS 281 Query: 578 --FNLSSTKQLQTILFEKQGIKPLKKTPGGAP--STSEEVLEELALDYPLPKVILEYRGL 633 L ++ + FE G P STS L PL + + EYR Sbjct: 282 CQLTLWGGEEALDVNFESNPYVLKLLNRYGIPVTSTSRRSLAPYHSQ-PLVQALTEYRRH 340 Query: 634 AKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAF 693 +K S++ +P I+P T R+H Y Q +GR+S +PN+Q IP + R F Sbjct: 341 SKSLSSFLHPIPAQIHPVTHRLHPKYMQIGAWSGRMSCYNPNIQQIPREAD----FRSCF 396 Query: 694 IAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQ 753 AP+ ++ ADYSQIELR+ A +S D + +A +G+D+H TA+ + +P+ VT Q Sbjct: 397 TAPDGRKLILADYSQIELRVAAQISGDSRMKSACQKGEDLHALTASLISSIPVSQVTKAQ 456 Query: 754 RRSAKAINFGLIYGMSAFGLARQLN------IPRKEAQKYMDLYFERYPGVLEYMERTRA 807 R++AKA+NFGLI+GM A GL + + +EA+++ +F+ Y G+ + R Sbjct: 457 RQAAKAVNFGLIFGMGAEGLKQYAGQSYGVEMTLEEAEQFRSAFFQSYRGINWWHHDLRE 516 Query: 808 QAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWL 867 +G TL GR+ S N A N P+QGTAADI+K A+ + + + Sbjct: 517 SHPLEG--RTLTGRKFLF----SPNTGLADLA-----NTPVQGTAADILKHALGLLASRI 565 Query: 868 QAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTR---LDVPLLVEVGSGENW 924 + +++ VHDE++ EV ++ D + ME + DVP + + ++W Sbjct: 566 R--GSDKKIVAIVHDEILMEVPVEEADDTVVLLKTAMEEAAQAILPDVPCEADAKAADSW 623 Query: 925 D 925 Sbjct: 624 A 624 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.147 0.438 Lambda K H 0.267 0.0452 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,776,344,770 Number of Sequences: 3077464 Number of extensions: 292495939 Number of successful extensions: 832653 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1733 Number of HSP's successfully gapped in prelim test: 1144 Number of HSP's that attempted gapping in prelim test: 819372 Number of HSP's gapped (non-prelim): 4284 length of query: 928 length of database: 1,040,396,356 effective HSP length: 138 effective length of query: 790 effective length of database: 615,706,324 effective search space: 486407995960 effective search space used: 486407995960 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 98 (42.2 bits)