17/01/2012 06:57:29 : INFO  : Run start: Tue Jan 17 06:57:27 GMT 2012
17/01/2012 06:57:40 : INFO  : Initialised job
17/01/2012 06:57:43 : INFO  : Renaming log file 'phyre2_20120117_065725.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/4f4bc497b8e95e53/phyre_20120117_065725.log'
17/01/2012 06:57:46 : INFO  : Initialised job:
Sequence
>batch____
MLMLFLTVAMVHIVALMSPGPDFFFVSQTAVSRSRKEAMMGVLGITCGVMVWAGIALLGL
HLIIEKMAWLHTLIMVGGGLYLCWMGYQMLRGALKKEAVSAPAPQVELAKSGRSFLKGLL
TNLANPKAIIYFGSVFSLFVGDNVGTTARWGIFALIIVETLAWFTVVASLFALPQMRRGY
QRLAKWIDGFAGALFAGFGIHLIISR

17/01/2012 06:57:48 : INFO  : Checked sequence
17/01/2012 06:57:55 : INFO  : Finding homologues with PSI-BLAST
17/01/2012 06:57:57 : INFO  : PSI-BLAST 3 iterations
17/01/2012 06:59:50 : INFO  : PSI-BLAST 5 iterations
17/01/2012 07:01:56 : INFO  : Finished PSI-BLAST
17/01/2012 07:02:02 : INFO  : Running Buildali to generate a3m file
17/01/2012 07:13:50 : INFO  : Converting to HMM
17/01/2012 07:13:55 : INFO  : Calibrating HMM
17/01/2012 07:14:17 : INFO  : Searching HMM database
17/01/2012 07:18:17 : INFO  : Finished buildali
17/01/2012 07:18:20 : INFO  : Predicting secondary structure
17/01/2012 07:18:39 : INFO  : Predicted secondary structure (PSI-Pred)
17/01/2012 07:18:42 : INFO  : Predicting Disordered regions
17/01/2012 07:18:52 : INFO  : Predicted Disorder (Disopred)
17/01/2012 07:18:56 : INFO  : Running memsat_svm check
17/01/2012 07:22:48 : INFO  : Globular protein
17/01/2012 07:22:50 : INFO  : Predicted Transmembrane (memsat_svm) ID '4f4bc497b8e95e53'
17/01/2012 07:22:54 : INFO  : Initialising fold library search
17/01/2012 07:23:01 : INFO  : Initialised search input
17/01/2012 07:23:05 : INFO  : Building Ensemble models
17/01/2012 07:23:12 : INFO  : Building hh.c2w8aC_.model.1.pdb
17/01/2012 07:23:42 : INFO  : Building c2w8aC_.1.pdb
17/01/2012 07:24:08 : INFO  : Building c2jp3A_.2.pdb
17/01/2012 07:24:35 : INFO  : Building c2jo1A_.3.pdb
17/01/2012 07:25:01 : INFO  : Building c2kegA_.4.pdb
17/01/2012 07:25:30 : INFO  : Building d1jb0l_.5.pdb
17/01/2012 07:25:56 : INFO  : Building c2zxeG_.6.pdb
17/01/2012 07:26:23 : INFO  : Building c2voyB_.7.pdb
17/01/2012 07:26:51 : INFO  : Building c1xioA_.8.pdb
17/01/2012 07:27:19 : INFO  : Building d1xioa_.9.pdb
17/01/2012 07:27:48 : INFO  : Building c2l35B_.10.pdb
17/01/2012 07:28:14 : INFO  : Building c2l34B_.11.pdb
17/01/2012 07:28:43 : INFO  : Building c2l34A_.12.pdb
17/01/2012 07:29:10 : INFO  : Building c2k9yA_.13.pdb
17/01/2012 07:29:40 : INFO  : Building c2k9yB_.14.pdb
17/01/2012 07:30:07 : INFO  : Building c3ixzB_.15.pdb
17/01/2012 07:30:40 : INFO  : Building c2jx4A_.16.pdb
17/01/2012 07:31:09 : INFO  : Building c3rkoF_.17.pdb
17/01/2012 07:31:39 : INFO  : Building c2k58B_.18.pdb
17/01/2012 07:32:08 : INFO  : Building c3n23E_.19.pdb
17/01/2012 07:32:36 : INFO  : Building d1gjja2.20.pdb
17/01/2012 07:33:38 : INFO  : Finished HH model building
17/01/2012 07:33:41 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
17/01/2012 07:36:26 : INFO  : html domain output complete ID '4f4bc497b8e95e53'
17/01/2012 07:44:17 : INFO  : Run end  : Tue Jan 17 07:44:14 GMT 2012
