Phyre 2 alignment of P0AG38 with c2y35A_

Return to main results | Retrieve Phyre Job Id

Job Description | P0AG38
Confidence | 0.51% | Date | Thu Jan 5 11:28:02 GMT 2012
Rank | 79 | Aligned Residues | 18
% Identity | 22% | Template | c2y35A_
PDB info | PDB header:hydrolase/dna | Chain: A: PDB Molecule:ld22664p; | PDBTitle: crystal structure of xrn1-substrate complex
Resolution | 3.20 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | L | M | S | P | G | P | D | F | F | F | V | S | Q | T | A | V | S | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | C | I | T | P | G | T | E | F | M | V | R | L | Q | E | G | L | R | A
Template Known Secondary structure |  | G | G | S | T | T | S |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 131 | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions