Phyre 2 alignment of Q9JMS4 with c2x9aA_

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Job Description | Q9JMS4
Confidence | 2.15% | Date | Wed Jan 25 15:21:16 GMT 2012
Rank | 41 | Aligned Residues | 25
% Identity | 28% | Template | c2x9aA_
PDB info | PDB header:viral protein | Chain: A: PDB Molecule:attachment protein g3p; | PDBTitle: crystal structure of g3p from phage if1 in complex with its2 coreceptor, the c-terminal domain of tola
Resolution | 2.47 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | K | A | C | L | S | I | N | N | V | N | N | N | S | K | N | K | L | R | S | G | V | S | Y | Y | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | A | E | C | L | S | K | P | A | F | D | G | T | L | S | N | V | W | K | E | G | D | S | R | Y | A
Template Known Secondary structure |  |  |  |  |  | T | S |  |  |  |  |  |  |  |  | S |  |  |  |  | T | T |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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