27/01/2012 20:50:17 : INFO  : Run start: Fri Jan 27 20:50:16 GMT 2012
27/01/2012 20:50:19 : INFO  : Initialised job
27/01/2012 20:50:20 : INFO  : Renaming log file 'phyre2_20120127_205016.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/4f463024f7bf1dcf/phyre_20120127_205016.log'
27/01/2012 20:50:20 : INFO  : Initialised job:
Sequence
>batch____
MYFMTKKMLTFVQTPKEGLSFAMTTYLNLFVKLLIFLYIQNTKACLSINNVNNNSKNKLR
SGVSYYIINLKMSMLFTEQIVTIYNKLIF

27/01/2012 20:50:21 : INFO  : Checked sequence
27/01/2012 20:50:23 : INFO  : Finding homologues with PSI-BLAST
27/01/2012 20:50:23 : INFO  : PSI-BLAST 3 iterations
27/01/2012 20:50:57 : INFO  : PSI-BLAST 5 iterations
27/01/2012 20:51:36 : INFO  : Finished PSI-BLAST
27/01/2012 20:51:36 : INFO  : Running Buildali to generate a3m file
27/01/2012 20:52:28 : INFO  : Converting to HMM
27/01/2012 20:52:28 : INFO  : Calibrating HMM
27/01/2012 20:52:32 : INFO  : Searching HMM database
27/01/2012 20:54:50 : INFO  : Finished buildali
27/01/2012 20:54:51 : INFO  : Predicting secondary structure
27/01/2012 20:54:55 : INFO  : Predicted secondary structure (PSI-Pred)
27/01/2012 20:54:56 : INFO  : Predicting Disordered regions
27/01/2012 20:54:58 : INFO  : Predicted Disorder (Disopred)
27/01/2012 20:54:59 : INFO  : Running memsat_svm check
27/01/2012 20:57:55 : INFO  : Running memsat_svm full
27/01/2012 21:01:26 : INFO  : Predicted Transmembrane (memsat_svm) ID '4f463024f7bf1dcf'
27/01/2012 21:01:27 : INFO  : Initialising fold library search
27/01/2012 21:01:29 : INFO  : Initialised search input
27/01/2012 21:01:30 : INFO  : Building Ensemble models
27/01/2012 21:01:32 : INFO  : Building hh.d1avwb_.model.1.pdb
27/01/2012 21:01:40 : INFO  : Building d1avwb_.1.pdb
27/01/2012 21:01:45 : INFO  : Building d1eyla_.2.pdb
27/01/2012 21:01:51 : INFO  : Building d3bx1c1.3.pdb
27/01/2012 21:01:57 : INFO  : Building c3s8jB_.4.pdb
27/01/2012 21:02:03 : INFO  : Building c2qn4B_.5.pdb
27/01/2012 21:02:09 : INFO  : Building c2dreA_.6.pdb
27/01/2012 21:02:16 : INFO  : Building d1tiea_.7.pdb
27/01/2012 21:02:22 : INFO  : Building d1wbaa_.8.pdb
27/01/2012 21:02:29 : INFO  : Building d1r8na_.9.pdb
27/01/2012 21:02:36 : INFO  : Building c3iirA_.10.pdb
27/01/2012 21:02:44 : INFO  : Building c1r8oA_.11.pdb
27/01/2012 21:02:51 : INFO  : Building c2go2A_.12.pdb
27/01/2012 21:02:58 : INFO  : Building d1sdoa_.13.pdb
27/01/2012 21:03:05 : INFO  : Building c3rnvA_.14.pdb
27/01/2012 21:03:13 : INFO  : Building d1agga_.15.pdb
27/01/2012 21:03:20 : INFO  : Building d1e88a3.16.pdb
27/01/2012 21:03:28 : INFO  : Building d1v1ha1.17.pdb
27/01/2012 21:03:34 : INFO  : Building d1whra_.18.pdb
27/01/2012 21:03:40 : INFO  : Building c3c8xA_.19.pdb
27/01/2012 21:03:47 : INFO  : Building d2bbaa1.20.pdb
27/01/2012 21:04:00 : INFO  : Finished HH model building
27/01/2012 21:04:01 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
27/01/2012 21:05:14 : INFO  : html domain output complete ID '4f463024f7bf1dcf'
27/01/2012 21:09:17 : INFO  : Run end  : Fri Jan 27 21:09:16 GMT 2012
