Phyre 2 alignment of Q9JMS4 with d1sdoa_

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Job Description | Q9JMS4
Confidence | 10.59% | Date | Wed Jan 25 15:21:16 GMT 2012
Rank | 13 | Aligned Residues | 42
% Identity | 31% | Template | d1sdoa_
SCOP info | Restriction endonuclease-like | Restriction endonuclease-like | Restriction endonuclease BstyI
Resolution | 1.85

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | T | T | Y | L | N | L | F | V | K | L | L | I | F | L | Y | I | Q | N | T | K | A | C | L | S | I | N | N | V | N | N | N | S | K | N | K | L | R | S | G | V | S | Y | Y
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |
Template Sequence |  | F | V | A | Y | D | L | F | V | K | H | M | A | F | Y | V | S | D | K | I | D | V | G | V | E | I | L | P | M | K | E | L | S | K | . | E | M | S | S | G | I | S | Y | Y
Template Known Secondary structure |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  | T | T | S |  | S |  |  |  |  |  |  |  |  |  |  |  |  | T | . | T | S |  | T | T | B |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 136 | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . |  | . | 170 | . | . | . | . | . | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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