BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (276 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P75820 N-acetylmuramoyl-L-alanine amidase amiD n=119 Ta... 567 e-160 UniRef50_A1V4B3 N-acetylmuramoyl-L-alanine amidase domain protei... 268 1e-70 UniRef50_C5BFW7 N-acetylmuramoyl-L-alanine amidase AmiD n=14 Tax... 267 3e-70 UniRef50_D1P770 N-acetylmuramoyl-L-alanine amidase, family 2 n=3... 246 8e-64 UniRef50_A7FHD3 N-acetylmuramoyl-L-alanine amidase, family 2 n=2... 242 1e-62 UniRef50_A9KGI9 Anhydro-N-acetylmuramyl-tripeptide amidase n=16 ... 216 9e-55 UniRef50_Q1QX12 Negative regulator of AmpC, AmpD n=1 Tax=Chromoh... 213 6e-54 UniRef50_UPI00016A62BF N-acetylmuramyl-L-alanine amidase, negati... 204 2e-51 UniRef50_Q3JK19 N-acetylmuramoyl-L-alanine amidase domain protei... 194 2e-48 UniRef50_A4VRS8 N-acetylmuramoyl-L-alanine amidase family protei... 189 6e-47 UniRef50_A1UW52 N-acetylmuramoyl-L-alanine amidase domain protei... 189 1e-46 UniRef50_A5WCW3 N-acetylmuramoyl-L-alanine amidase, family 2 n=5... 188 1e-46 UniRef50_A6UZQ6 N-acetylmuramoyl-L-alanine amidase AmiD n=53 Tax... 188 2e-46 UniRef50_C6X3P6 N-acetylmuramoyl-L-alanine amidase n=3 Tax=Bacte... 185 2e-45 UniRef50_Q4ZZT4 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 184 3e-45 UniRef50_C0YHQ4 Possible N-acetylmuramoyl-L-alanine amidase n=1 ... 179 9e-44 UniRef50_A4SRC8 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Aerom... 179 1e-43 UniRef50_C7NA60 N-acetylmuramyl-L-alanine amidase, negative regu... 172 9e-42 UniRef50_C9MVU9 N-acetylmuramoyl-L-alanine amidase domain protei... 169 1e-40 UniRef50_Q15N79 N-acetylmuramyl-L-alanine amidase, negative regu... 164 3e-39 UniRef50_C0QVR5 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Brach... 163 5e-39 UniRef50_C4SAC3 Negative regulator of beta-lactamase expression ... 162 1e-38 UniRef50_C1QGN2 Negative regulator of beta-lactamase expression ... 160 4e-38 UniRef50_C7XRK8 Glutaminase n=10 Tax=Fusobacterium RepID=C7XRK8_... 158 1e-37 UniRef50_A4CAP2 Probable N-acetylmuramoyl-L-alanine amidase n=1 ... 151 2e-35 UniRef50_B6JBX5 Negative regulator of AmpC, AmpD n=3 Tax=Alphapr... 150 5e-35 UniRef50_A5V2C7 N-acetylmuramoyl-L-alanine amidase, family 2 n=6... 147 4e-34 UniRef50_A9M6A2 Protein ampD n=39 Tax=Proteobacteria RepID=A9M6A... 140 5e-32 UniRef50_B3ESH1 Putative uncharacterized protein n=1 Tax=Candida... 139 1e-31 UniRef50_C6XME2 N-acetylmuramyl-L-alanine amidase, negative regu... 139 1e-31 UniRef50_Q4FPN2 Probable N-acetylmuramoyl-L-alanine amidase n=2 ... 136 7e-31 UniRef50_C6QHF6 N-acetylmuramyl-L-alanine amidase, negative regu... 136 8e-31 UniRef50_Q0BV14 Anhydro-N-acetylmuramyl-tripeptide amidase n=1 T... 135 1e-30 UniRef50_Q2RVT4 AmpD (Negative regulator of AmpC) n=2 Tax=Rhodos... 135 1e-30 UniRef50_B6BSD7 Probable N-acetylmuramoyl-L-alanine amidase YbjR... 134 4e-30 UniRef50_B0T844 N-acetylmuramyl-L-alanine amidase, negative regu... 134 4e-30 UniRef50_Q07PU2 N-acetylmuramyl-L-alanine amidase, negative regu... 133 6e-30 UniRef50_A5CBZ0 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Orien... 132 1e-29 UniRef50_A5FA27 N-acetylmuramoyl-L-alanine amidase, family 2 n=2... 124 2e-27 UniRef50_B6IRH2 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Rhodo... 124 3e-27 UniRef50_UPI0001793312 PREDICTED: hypothetical protein n=1 Tax=A... 122 1e-26 UniRef50_B2IHS0 N-acetylmuramyl-L-alanine amidase, negative regu... 121 3e-26 UniRef50_Q2NVA7 Putative N-acetylmuramoyl-L-alanine amidase n=1 ... 120 5e-26 UniRef50_A3HXI6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Algor... 117 4e-25 UniRef50_C7PRR2 N-acetylmuramyl-L-alanine amidase, negative regu... 115 1e-24 UniRef50_Q28T26 Negative regulator of AmpC AmpD n=39 Tax=Rhodoba... 112 1e-23 UniRef50_A8TR24 Negative regulator of beta-lactamase expression ... 112 1e-23 UniRef50_B9NMR2 N-acetylmuramyl-L-alanine amidase, negative regu... 110 6e-23 UniRef50_D0CW21 N-acetylmuramyl-L-alanine amidase, negative regu... 110 6e-23 UniRef50_C7D9N0 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=... 109 1e-22 UniRef50_C2G1S0 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Sphin... 108 3e-22 UniRef50_C6XXC7 N-acetylmuramoyl-L-alanine amidase family 2 n=3 ... 106 9e-22 UniRef50_A5UR54 N-acetylmuramoyl-L-alanine amidase, family 2 n=2... 102 1e-20 UniRef50_Q0F4W8 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 100 5e-20 UniRef50_Q3BNF4 N-acetylmuramoyl-L-alanine amidase n=14 Tax=Xant... 100 6e-20 UniRef50_B8GD95 N-acetylmuramyl-L-alanine amidase, negative regu... 97 5e-19 UniRef50_A3VV46 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Parvu... 93 1e-17 UniRef50_C7RNH8 N-acetylmuramyl-L-alanine amidase, negative regu... 91 3e-17 UniRef50_A8PNB6 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=... 89 2e-16 UniRef50_D0RN01 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=... 88 3e-16 UniRef50_A1TKH5 N-acetylmuramyl-L-alanine amidase, negative regu... 87 6e-16 UniRef50_A4W6L1 N-acetylmuramoyl-L-alanine amidase, family 2 n=3... 87 8e-16 UniRef50_B1XX10 N-acetylmuramyl-L-alanine amidase, negative regu... 86 1e-15 UniRef50_D0J795 N-acetylmuramyl-L-alanine amidase, negative n=9 ... 86 2e-15 UniRef50_B2JH28 N-acetylmuramyl-L-alanine amidase, negative regu... 85 3e-15 UniRef50_UPI0000D5333F negative regulator of AmpC, AmpD n=1 Tax=... 84 5e-15 UniRef50_B4RX52 N-acetylmuramoyl-L-alanine amidase, putative n=2... 84 5e-15 UniRef50_Q4ZY97 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 82 2e-14 UniRef50_B5JVS6 Negative regulator of AmpC, AmpD n=1 Tax=gamma p... 82 2e-14 UniRef50_P82974 1,6-anhydro-N-acetylmuramyl-L-alanine amidase am... 82 3e-14 UniRef50_Q0AC58 N-acetylmuramyl-L-alanine amidase, negative regu... 82 3e-14 UniRef50_B3SF77 Putative uncharacterized protein (Fragment) n=1 ... 80 9e-14 UniRef50_A4G8Q1 N-acetylmuramoyl-L-alanine amidase n=4 Tax=Burkh... 80 1e-13 UniRef50_C9R6I7 Protein AmpD n=1 Tax=Aggregatibacter actinomycet... 79 1e-13 UniRef50_B8GT21 N-acetylmuramyl-L-alanine amidase, negative regu... 79 2e-13 UniRef50_Q1DDM5 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 79 2e-13 UniRef50_P13016 1,6-anhydro-N-acetylmuramyl-L-alanine amidase am... 79 2e-13 UniRef50_A6GR52 Putative anhydro-N-acetylmuramyl-tripeptide amid... 76 1e-12 UniRef50_C6APP4 Protein AmpD n=8 Tax=Gammaproteobacteria RepID=C... 75 2e-12 UniRef50_Q46X31 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 75 2e-12 UniRef50_A1K6E1 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Azoar... 75 3e-12 UniRef50_A4SVB0 N-acetylmuramoyl-L-alanine amidase, family 2 n=4... 75 4e-12 UniRef50_Q093H8 Negative regulator of beta-lactamase expression ... 74 5e-12 UniRef50_A4A5I4 Anhydro-N-acetylmuramyl-tripeptide amidase n=1 T... 73 9e-12 UniRef50_Q65VN8 AmpD protein n=13 Tax=Gammaproteobacteria RepID=... 72 1e-11 UniRef50_B3QXY2 N-acetylmuramyl-L-alanine amidase, negative regu... 72 2e-11 UniRef50_C5TMG7 Protein AmpD n=4 Tax=Neisseriaceae RepID=C5TMG7_... 72 3e-11 UniRef50_B0VMP8 N-acetyl-anhydromuramyl-L-alanine amidase (Regul... 71 5e-11 UniRef50_B3R6P0 N-acetyl-anhydromuranmyl-L-alanine amidase n=3 T... 70 8e-11 UniRef50_A1AXT9 N-acetylmuramyl-L-alanine amidase, negative regu... 70 8e-11 UniRef50_A8FVJ2 Negative regulator of beta-lactamase expression-... 69 1e-10 UniRef50_A8FQB8 N-acetylmuramyl-L-alanine amidase, negative regu... 66 1e-09 UniRef50_A5WCS6 N-acetylmuramoyl-L-alanine amidase, family 2 n=3... 65 2e-09 UniRef50_C8PWQ1 Protein AmpD n=1 Tax=Enhydrobacter aerosaccus SK... 65 2e-09 UniRef50_A0L5K2 N-acetylmuramyl-L-alanine amidase, negative regu... 65 3e-09 UniRef50_A6T2C3 Negative regulator of beta-lactamase expression ... 64 5e-09 UniRef50_C0R4G3 N-acetylmuramoyl-L-alanine amidase, family 2 n=9... 64 7e-09 UniRef50_C9LCL1 N-acetylmuramoyl-L-alanine amidase CwlL n=2 Tax=... 62 2e-08 UniRef50_C9Y7L0 1,6-anhydro-N-acetylmuramyl-L-alanine amidase am... 60 6e-08 UniRef50_C5T4Q5 N-acetylmuramyl-L-alanine amidase, negative regu... 60 1e-07 UniRef50_D0LQ75 N-acetylmuramyl-L-alanine amidase, negative regu... 60 1e-07 UniRef50_Q1QZ97 Negative regulator of AmpC, AmpD n=1 Tax=Chromoh... 60 1e-07 UniRef50_Q8ES14 Putative uncharacterized protein OB0830 n=1 Tax=... 57 5e-07 UniRef50_B5GAH2 Amidase n=15 Tax=Streptomyces RepID=B5GAH2_9ACTO 57 8e-07 UniRef50_Q12NJ5 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 57 8e-07 UniRef50_Q92IC3 Putative N-acetylmuramoyl-L-alanine amidase RC04... 56 1e-06 UniRef50_B3ZYJ5 N-acetylmuramoyl-L-alanine amidase, putative n=1... 55 4e-06 UniRef50_B8FYR6 N-acetylmuramyl-L-alanine amidase, negative regu... 54 8e-06 UniRef50_A0Q0S8 N-acetylmuramoyl-L-alanine amidase cwlL (Cellwal... 53 9e-06 UniRef50_UPI00016C05EA N-acetylmuramoyl-L-alanine amidase n=1 Ta... 53 1e-05 UniRef50_A6GDD4 Putative N-acetylmuramoyl-L-alanine amidase n=1 ... 52 2e-05 UniRef50_D1CGY2 N-acetylmuramyl-L-alanine amidase, negative regu... 52 2e-05 UniRef50_B3QCK8 N-acetylmuramyl-L-alanine amidase, negative regu... 52 2e-05 UniRef50_B5HCN0 Secreted protein n=3 Tax=Streptomyces RepID=B5HC... 52 2e-05 UniRef50_B2U693 N-acetylmuramoyl-L-alanine amidase family protei... 52 3e-05 UniRef50_C0A8M7 Negative regulator of beta-lactamase expression-... 51 5e-05 UniRef50_Q1ARF9 N-acetylmuramyl-L-alanine amidase, negative regu... 50 7e-05 UniRef50_B6BVD5 N-acetylmuramyl-L-alanine amidase, negative regu... 50 1e-04 UniRef50_D2AU78 N-acetylmuramoyl-L-alanine amidase n=5 Tax=Bacte... 49 2e-04 UniRef50_D2AQX4 Negative regulator of beta-lactamase expression-... 48 3e-04 UniRef50_D1WWE1 N-acetylmuramyl-L-alanine amidase, negative regu... 48 3e-04 UniRef50_D1SAT8 N-acetylmuramyl-L-alanine amidase, negative regu... 48 3e-04 UniRef50_A5GTP3 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Synec... 47 5e-04 UniRef50_D2BEW5 Negative regulator of beta-lactamase expression-... 47 7e-04 UniRef50_C4DNA4 Negative regulator of beta-lactamase expression ... 46 0.002 UniRef50_D2PZI0 N-acetylmuramyl-L-alanine amidase, negative regu... 45 0.003 UniRef50_C7MM46 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Crypt... 45 0.003 UniRef50_A7NJ74 N-acetylmuramyl-L-alanine amidase, negative regu... 45 0.003 UniRef50_D1XLT9 N-acetylmuramyl-L-alanine amidase, negative regu... 45 0.003 UniRef50_A9B3J4 N-acetylmuramyl-L-alanine amidase, negative regu... 44 0.004 UniRef50_C7N6M2 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Slack... 44 0.004 UniRef50_C0WQZ5 N-acetylmuramyl-L-alanine amidase, negative regu... 44 0.005 UniRef50_D0LH65 N-acetylmuramyl-L-alanine amidase, negative regu... 44 0.005 UniRef50_Q026T4 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 44 0.008 UniRef50_C9N2Y5 N-acetylmuramyl-L-alanine amidase, negative regu... 43 0.010 UniRef50_Q7V7M8 N-acetylmuramoyl-L-alanine amidase (Family 2) n=... 43 0.015 UniRef50_D1X7T3 N-acetylmuramyl-L-alanine amidase, negative regu... 42 0.022 UniRef50_C0QM08 Putative N-acetylmuramoyl-L-alanine amidase AmpD... 42 0.024 UniRef50_Q31KQ2 N-acetylmuramoyl-L-alanine amidase, family 2 n=2... 42 0.033 UniRef50_Q0AY32 Negative regulator of beta-lactamase expression-... 41 0.034 UniRef50_Q9FC03 Putative secreted amidase n=2 Tax=Streptomyces R... 41 0.038 UniRef50_B2SIS3 N-acetylmuramoyl-L-alanine amidase, putative n=2... 41 0.045 UniRef50_Q9ZX49 Gp29 n=1 Tax=Mycobacterium phage TM4 RepID=Q9ZX4... 40 0.095 >UniRef50_P75820 N-acetylmuramoyl-L-alanine amidase amiD n=119 Tax=Enterobacteriaceae RepID=AMID_ECOLI Length = 276 Score = 567 bits (1461), Expect = e-160, Method: Compositional matrix adjust. Identities = 276/276 (100%), Positives = 276/276 (100%) Query: 1 MRRFFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSL 60 MRRFFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSL Sbjct: 1 MRRFFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSL 60 Query: 61 ATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIEL 120 ATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIEL Sbjct: 61 ATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIEL 120 Query: 121 ENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPL 180 ENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPL Sbjct: 121 ENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPL 180 Query: 181 FPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRR 240 FPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRR Sbjct: 181 FPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRR 240 Query: 241 VIMAFQMHFRPTLYNGEADAETQAIAEALLEKYGQD 276 VIMAFQMHFRPTLYNGEADAETQAIAEALLEKYGQD Sbjct: 241 VIMAFQMHFRPTLYNGEADAETQAIAEALLEKYGQD 276 >UniRef50_A1V4B3 N-acetylmuramoyl-L-alanine amidase domain protein n=59 Tax=Proteobacteria RepID=A1V4B3_BURMS Length = 314 Score = 268 bits (685), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 143/268 (53%), Positives = 176/268 (65%), Gaps = 1/268 (0%) Query: 7 LVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK 66 L+A+ +LA +V + Y DT A++A RI+ LV+HYT SL LT + Sbjct: 24 LLASFSMLAAACTTPTLVNRGDYYADTSLPARSADSRIRFLVMHYTEIGEAPSLRVLTQE 83 Query: 67 QVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQ 126 VS+HY+VP P G P ++QLVPE E AWHAG+SAW+GAT LN SIGIE NRG Sbjct: 84 NVSAHYVVPDAPRTERGAPVVYQLVPESERAWHAGVSAWQGATELNGVSIGIENVNRGPI 143 Query: 127 KSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQL 186 + + +AP+ PAQ+ A++ LAKDI+ARY I P VV H+DIAPQRK DPGPLFPW+ L Sbjct: 144 DTPHGRMWAPYPPAQVDAIVRLAKDIVARYRIPPTRVVGHSDIAPQRKIDPGPLFPWRAL 203 Query: 187 AQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPD-MTPREQRRVIMAF 245 A+ G+GAWPD + V LAGR P + VD L LARYGYDV D + RRV AF Sbjct: 204 AKAGVGAWPDDETVAARLAGRPPKSLVDVRELQLKLARYGYDVATDGVLDDRTRRVFSAF 263 Query: 246 QMHFRPTLYNGEADAETQAIAEALLEKY 273 QMHFRPT Y G DAET AIA+ALL+KY Sbjct: 264 QMHFRPTDYAGNPDAETDAIAQALLDKY 291 >UniRef50_C5BFW7 N-acetylmuramoyl-L-alanine amidase AmiD n=14 Tax=Enterobacteriaceae RepID=C5BFW7_EDWI9 Length = 294 Score = 267 bits (683), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 137/277 (49%), Positives = 179/277 (64%), Gaps = 4/277 (1%) Query: 1 MRRFFWLVAAALLLAGCAGEKGIVE-KEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSS 59 + + + A +L+ C +E ++GY A RI+ LV+HYTA D SS Sbjct: 13 IEKLVVVTILAFMLSACVRHSDKIEARDGYFASHAFTAVGQNERIRFLVLHYTAVDDVSS 72 Query: 60 LATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIE 119 L LT +QVS+HYL+P P +G+P + QLV E + AWHAGIS+W G + LNDTSIGIE Sbjct: 73 LNILTKEQVSAHYLIPKEPKSIHGQPVVLQLVDENKRAWHAGISSWNGRSGLNDTSIGIE 132 Query: 120 LENRGWQKSA-GVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPG 178 + N G+ + G + + P+ QI A+ LAKDI+ RYHI+P+NVV H+DIAP RK DPG Sbjct: 133 IVNLGYTDNMLGQRTWYPYTEKQIAAVAALAKDIVNRYHIEPDNVVGHSDIAPLRKQDPG 192 Query: 179 PLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPD--MTPR 236 LFPW+ LA GIGAWPD VN YLA R+PH+PV + + LL +YGYD P + Sbjct: 193 KLFPWEHLAAMGIGAWPDRSTVNKYLADRSPHSPVKVSVIQALLKQYGYDQIPQNGVLDE 252 Query: 237 EQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKY 273 R+ + AFQMHFRP+ +G ADAET+AIA ALLEKY Sbjct: 253 NTRKTVSAFQMHFRPSDISGNADAETEAIARALLEKY 289 >UniRef50_D1P770 N-acetylmuramoyl-L-alanine amidase, family 2 n=3 Tax=Providencia RepID=D1P770_9ENTR Length = 295 Score = 246 bits (627), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 134/275 (48%), Positives = 167/275 (60%), Gaps = 6/275 (2%) Query: 1 MRRFFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSL 60 M R W ++ LL GC+ K GY LD ++ RI+ +V+HYT D S+ Sbjct: 1 MYRAIW-ISIIFLLVGCSTTP---SKTGYFLDQSHPSRNTSERIQYIVLHYTVSDDAHSI 56 Query: 61 ATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIEL 120 LT +VSSHYL+P+ P + NG+P I QLVPE+ AWHAG S W+ LND SIGIE+ Sbjct: 57 KILTKGKVSSHYLIPSQPEQKNGQPVILQLVPERLKAWHAGDSRWQYHHSLNDNSIGIEI 116 Query: 121 ENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPL 180 N G + G + PF +QI ALIPL DI+ RY I PENV+ H+DIAP RK DPG Sbjct: 117 VNEGLVRKNGQDIWQPFNDSQIDALIPLLSDIMQRYGIPPENVIGHSDIAPLRKQDPGRA 176 Query: 181 FPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTP--REQ 238 FPWQ LA GIGAWPD Q V +LAGR + P + L + L YGY P E Sbjct: 177 FPWQALALHGIGAWPDPQTVTKHLAGRQVNAPANVLRLQKALKFYGYAGIPQTGKLDAET 236 Query: 239 RRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKY 273 +R + AFQ+HFRP +G ADAET+AIA AL+EKY Sbjct: 237 KRTLRAFQLHFRPRDIDGLADAETEAIALALIEKY 271 >UniRef50_A7FHD3 N-acetylmuramoyl-L-alanine amidase, family 2 n=28 Tax=Enterobacteriaceae RepID=A7FHD3_YERP3 Length = 283 Score = 242 bits (617), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 121/252 (48%), Positives = 166/252 (65%), Gaps = 1/252 (0%) Query: 23 IVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYN 82 ++++ YQ+DT + A R++ LV+HYTA D SL LT +VS+HYL+P P + Sbjct: 27 LIDRGAYQIDTHYPSVAKNERVRFLVLHYTAVDDAESLRLLTQGEVSAHYLIPTHPKKAG 86 Query: 83 GKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQI 142 GK QLVPE + AWHAG+S+W+G LNDTSIGIE+ N G+ + + + P+ +QI Sbjct: 87 GKAIALQLVPEAQRAWHAGVSSWQGRNNLNDTSIGIEIVNLGFTEKMLGRTWYPYNESQI 146 Query: 143 QALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNF 202 + + L KDI+ RY+I P +VVAH+DIAP RK DPGPLFPW++LA++G+GAWPD V Sbjct: 147 ELIEQLTKDIVQRYNISPSDVVAHSDIAPLRKSDPGPLFPWKRLAEKGVGAWPDDATVAK 206 Query: 203 YLAGRAPHTPVDTASLLELLARYGYDV-KPDMTPREQRRVIMAFQMHFRPTLYNGEADAE 261 Y+ GR A + + LA YGY + + E R+VI AFQMHFRP ++G D E Sbjct: 207 YIGGRDKKGAASVAVIQQALAAYGYKIPQNGQLDTETRQVIKAFQMHFRPQDFSGVPDVE 266 Query: 262 TQAIAEALLEKY 273 T+AIA AL+EKY Sbjct: 267 TEAIALALVEKY 278 >UniRef50_A9KGI9 Anhydro-N-acetylmuramyl-tripeptide amidase n=16 Tax=Proteobacteria RepID=A9KGI9_COXBN Length = 257 Score = 216 bits (549), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 115/248 (46%), Positives = 159/248 (64%), Gaps = 6/248 (2%) Query: 29 YQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQ--VSSHYLVPAVPPRYNGKPR 86 Y+++ A+ RI+ LV+HYTA +F+ SL LT + VS HYL+P +GK + Sbjct: 3 YEINLNYPAKNFDKRIRFLVLHYTAKNFEDSLEILTQEAFGVSGHYLIPE--SSIDGKKQ 60 Query: 87 IWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALI 146 I+QLVPE+ AWHAG+SAW+G LNDTSIGIE+ N G+Q+ + + PF QI+ +I Sbjct: 61 IFQLVPEKHRAWHAGVSAWQGRIHLNDTSIGIEIVNLGYQEEGEKRRWFPFLDYQIELII 120 Query: 147 PLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAG 206 LAKDII RY + P VV H+DI+P+RK DPGPLFPW++L +QGIGAW + + + Sbjct: 121 ELAKDIIERYQLHPTCVVGHSDISPERKADPGPLFPWKKLYEQGIGAWYEDE-CKKEMER 179 Query: 207 RAPHTPVDTASLLELLARYGYDVKPD-MTPREQRRVIMAFQMHFRPTLYNGEADAETQAI 265 R + D L L YGY ++ ++ ++V+ AFQMHFRPT Y+G D ET AI Sbjct: 180 RLSNETTDIRWLQRHLKTYGYSIEETGELDKKTQQVVCAFQMHFRPTDYSGIPDKETYAI 239 Query: 266 AEALLEKY 273 AL++KY Sbjct: 240 LYALVKKY 247 >UniRef50_Q1QX12 Negative regulator of AmpC, AmpD n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QX12_CHRSD Length = 303 Score = 213 bits (542), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 125/273 (45%), Positives = 160/273 (58%), Gaps = 13/273 (4%) Query: 4 FFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATL 63 + W + L L CA + ++GYQ+D R A R++ LV+HYT D SL+TL Sbjct: 25 WLWAMPCLLALTACAAPT-LETRDGYQVDRRYTAPGQSSRVRHLVLHYTDSDARRSLSTL 83 Query: 64 TDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENR 123 T VS+HY++ P+I+QLV E AWHAG SAW T LNDTSIGIE+ NR Sbjct: 84 TGPHVSAHYVL------TREAPKIYQLVDESRRAWHAGASAWHSRTNLNDTSIGIEVVNR 137 Query: 124 GWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPW 183 G ++ + + P+ AQI LI LA+DI+AR+ I P +VV HADIAP+RK DPGP FPW Sbjct: 138 GPYQTPAGRAWTPYPSAQIDTLIALARDIVARHAIDPVDVVGHADIAPRRKIDPGPRFPW 197 Query: 184 QQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPR---EQRR 240 +L + GIGAWP+ RV Y R +P LA YGY V +T R Sbjct: 198 YRLYRAGIGAWPETARVMAY-QRRFMASPPSLTQWQRALAAYGYPVA--VTGRFDALTHD 254 Query: 241 VIMAFQMHFRPTLYNGEADAETQAIAEALLEKY 273 + AFQMHFRPT ++G DA + AI ALLEKY Sbjct: 255 TLRAFQMHFRPTRHDGFPDAHSAAILWALLEKY 287 >UniRef50_UPI00016A62BF N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A62BF Length = 214 Score = 204 bits (520), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 112/215 (52%), Positives = 135/215 (62%), Gaps = 3/215 (1%) Query: 1 MRRFF--WLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDS 58 MR F A +LA C +V + Y DT R AQ A RI+ LV+HYT D Sbjct: 1 MRLFIRGAFCAGLCMLAACT-SPSLVGRGTYFADTSRHAQGADARIRFLVMHYTESDEAQ 59 Query: 59 SLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGI 118 SL TLT VS+HY+VPA P GKP ++QLVPE + AWHAG+SAW+GAT LN SIGI Sbjct: 60 SLRTLTGDAVSAHYVVPAQPRIEWGKPVVYQLVPEAQRAWHAGVSAWQGATELNAASIGI 119 Query: 119 ELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPG 178 E N G + + + P+ P Q+ ALI L++DI+ARY I P VV H+DIAPQRK DPG Sbjct: 120 ENVNGGPADTPQGRTWQPYPPEQVDALIRLSQDIVARYAIPPTRVVGHSDIAPQRKIDPG 179 Query: 179 PLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPV 213 P FPW+ LAQ G+GAWPD V LAGR PH V Sbjct: 180 PAFPWRALAQAGVGAWPDDATVAARLAGRDPHAAV 214 >UniRef50_Q3JK19 N-acetylmuramoyl-L-alanine amidase domain protein n=8 Tax=Proteobacteria RepID=Q3JK19_BURP1 Length = 454 Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 121/294 (41%), Positives = 165/294 (56%), Gaps = 26/294 (8%) Query: 2 RRFFWLVAAALL-LAGCAGEKGIV-----------EKEGYQLDTRRQAQAAYPRIKVLVI 49 R W V +L LAGC G+V GY +D Q+ R++ LV+ Sbjct: 130 RSSAWPVGMLMLPLAGCGDGDGVVPSAHAQDTPPPSGAGYTIDRSIQSPNQDSRVRTLVL 189 Query: 50 HYTADDFDSSLATLTD--KQVSSHYLVPAVPPRYNGKP-RIWQLVPEQELAWHAGISAWR 106 HYTA S+A+LT +QVS+HYLVP +G+ ++++LVP+ AWHAG+S W+ Sbjct: 190 HYTAQTLADSIASLTSPQRQVSAHYLVPDAAD--DGRRFKVFELVPQARRAWHAGVSYWQ 247 Query: 107 GATRLNDTSIGIELENRGWQKSAGV-----KYFAPFEPAQIQALIPLAKDIIARYHIKPE 161 G LN S+GIE+ N G+ + + P+ AQ+ LA D++A++ + P Sbjct: 248 GDRMLNAGSVGIEIVNLGFPPEDENLPLMNRRWYPYPDAQVAVFGALAADVVAQHQVLPH 307 Query: 162 NVVAHADIAPQRKDDPGPLFPWQQLAQQ-GIGAWPDAQRVNFYLAGRAPHTPVDTASLLE 220 VV H+D+AP RK DPGPLFPW++L Q IGAWP+A+ V++Y R D ASL Sbjct: 308 KVVGHSDVAPGRKTDPGPLFPWKKLYDQYKIGAWPEAEAVDYYRVNRP--FAGDVASLQS 365 Query: 221 LLARYGYDVKPDMTPREQR-RVIMAFQMHFRPTLYNGEADAETQAIAEALLEKY 273 L YGYD T Q V+ AFQMHFRP+ Y+G D ET AI +ALLEKY Sbjct: 366 KLLAYGYDTPQTGTLDAQTVNVVSAFQMHFRPSRYDGVPDVETVAILDALLEKY 419 >UniRef50_A4VRS8 N-acetylmuramoyl-L-alanine amidase family protein n=19 Tax=Proteobacteria RepID=A4VRS8_PSEU5 Length = 262 Score = 189 bits (481), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 114/257 (44%), Positives = 153/257 (59%), Gaps = 16/257 (6%) Query: 16 GCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVP 75 GCA G ++DT + R++ +V+HYT+ D SL L+ + VSSHYL+ Sbjct: 15 GCA--------SGPRIDTSHSSIGHDSRVQFIVLHYTSTDLPRSLELLSGRDVSSHYLIG 66 Query: 76 AVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSA-GVKYF 134 P I++LV E AWHAG S W G T LN TSIGIEL N+G+++SA G + + Sbjct: 67 ESPAT------IYRLVDEDRRAWHAGESEWNGRTWLNATSIGIELVNQGYEQSADGRRLW 120 Query: 135 APFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAW 194 P+ AQI AL+ L KDI+AR+ +KP ++ H+DIAPQRK DPGPLFPW++LA++G+ W Sbjct: 121 YPYSQAQIDALVVLLKDIMARHGLKPGAIIGHSDIAPQRKVDPGPLFPWKRLAEEGLVPW 180 Query: 195 PDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDV-KPDMTPREQRRVIMAFQMHFRPTL 253 PDA V A A E LA GY V + E R VI AFQM +RPT Sbjct: 181 PDAGAVAAAQAHYAAAGLPAIGWFQEALAAQGYRVPRHGHLDDETRNVIAAFQMKYRPTR 240 Query: 254 YNGEADAETQAIAEALL 270 ++GE DAET A+ + L+ Sbjct: 241 FDGEPDAETAAMLQVLV 257 >UniRef50_A1UW52 N-acetylmuramoyl-L-alanine amidase domain protein n=62 Tax=Proteobacteria RepID=A1UW52_BURMS Length = 341 Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 115/240 (47%), Positives = 148/240 (61%), Gaps = 12/240 (5%) Query: 43 RIKVLVIHYTADDFDSSLATLTD--KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHA 100 R++ LV+HYTA S+A LTD + VS+HYLVP R++ LVPE AWHA Sbjct: 71 RVRTLVLHYTAQTLARSVALLTDPARPVSAHYLVPDAAD-AGTLFRVYALVPETNRAWHA 129 Query: 101 GISAWRGATRLNDTSIGIELENRGW---QKSAGV--KYFAPFEPAQIQALIPLAKDIIAR 155 G+S W+G LN +SIG+E+ N G+ ++A + + +APF AQ+ + LA DI AR Sbjct: 130 GVSYWQGERLLNASSIGVEIVNTGFPDADENAPLMRRRWAPFPDAQMAVVGRLAADIAAR 189 Query: 156 YHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQ-GIGAWPDAQRVNFYLAGRAPHTPVD 214 + I P+ VV H+DIAP RK DPGPLFPW+ L +Q G+GAWPDA V +Y A R D Sbjct: 190 HEIPPQKVVGHSDIAPGRKLDPGPLFPWRMLHEQYGVGAWPDAIAVEYYRACRPFRG--D 247 Query: 215 TASLLELLARYGYDV-KPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKY 273 A L L YGYD + + VI AFQMHFRP Y+G DAET AI +ALL+KY Sbjct: 248 IAELQAKLLAYGYDTPQTGVLDLRTTDVIAAFQMHFRPARYDGVPDAETVAILDALLDKY 307 >UniRef50_A5WCW3 N-acetylmuramoyl-L-alanine amidase, family 2 n=5 Tax=Bacteria RepID=A5WCW3_PSYWF Length = 308 Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 113/283 (39%), Positives = 163/283 (57%), Gaps = 27/283 (9%) Query: 7 LVAAALLLAGCAGEKGIVEKEGYQLDTRR-QAQAAYPRIKVLVIHYTADDFDSSLATLTD 65 L A +L L+GC G + Y +D++ QAQ RIK +V+HYTA++ SL LT Sbjct: 33 LAAVSLTLSGCMG----LPATTYAIDSQSYQAQGKSQRIKYIVLHYTAENEPESLRILTT 88 Query: 66 KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGW 125 VS+HYL+P + KP I+QLVP+ + AWHAG ++ G + LNDTSIGIE+ N G Sbjct: 89 ANVSAHYLIPIT----DDKP-IYQLVPDNQRAWHAGQGSFAGRSILNDTSIGIEIVNEGI 143 Query: 126 QKSAG------------VKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQR 173 Q+ +++ F QI+ + L +D+ +Y I+P ++ H+D+AP R Sbjct: 144 QQQFRKAKNTDNDGYHPAEHYVEFTDIQIKKIAQLVQDLAQKYEIEPTLIIGHSDMAPSR 203 Query: 174 KDDPGPLFPWQQLAQQ-GIGAW-PDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKP 231 K DPG FPW++L ++ GIGAW +A + F G V A + ++L+ YGYD+ P Sbjct: 204 KIDPGAKFPWERLYKEYGIGAWYEEADKQQFMTEGSFQSATV--ADIQQMLSDYGYDITP 261 Query: 232 -DMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKY 273 D R R V+ AFQ+HFRP G+ D ET AI +AL +KY Sbjct: 262 SDEWDRSSRNVVYAFQLHFRPQKLTGQMDLETYAILKALNKKY 304 >UniRef50_A6UZQ6 N-acetylmuramoyl-L-alanine amidase AmiD n=53 Tax=Proteobacteria RepID=A6UZQ6_PSEA7 Length = 291 Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 121/288 (42%), Positives = 164/288 (56%), Gaps = 22/288 (7%) Query: 5 FWLVAAALLLAGCAGEKGIVEK---EGYQL---------DTRRQAQAAYPRIKVLVIHYT 52 ++A AL LAGC + +VE+ G L ++ R + A R++ LV+HYT Sbjct: 6 LCVLACALGLAGCL-QGAVVERPDAHGETLAPPPLAIDYNSYRTSAAYNKRVRYLVLHYT 64 Query: 53 ADDFDSSLATLTDKQVSSHYLVPAVPPR------YNGKPRIWQLVPEQELAWHAGISAWR 106 A DF S+ LT S+HYLVP+ ++G+ RI+ LV E + AWHAG+S+W Sbjct: 65 ALDFSRSVEMLTRGPGSAHYLVPSPADASYRRAGFSGQ-RIFNLVDENDRAWHAGVSSWG 123 Query: 107 GATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARY-HIKPENVVA 165 G LND+SIGIE+ N + GV F +EP+QI+AL LA++I+ RY I P++V+ Sbjct: 124 GREGLNDSSIGIEIVNLA-RDDDGVFTFPDYEPSQIEALRQLARNILQRYPDISPKHVLG 182 Query: 166 HADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARY 225 H+DIA RK DPGP PW++L GIGAW D + Y A A LE L RY Sbjct: 183 HSDIAVGRKSDPGPKLPWKELHDAGIGAWYDDATRDRYQARFERDGLPSRAEWLEALRRY 242 Query: 226 GYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKY 273 GY V + ++ AFQMHFRP ++G ADAET AI AL E+Y Sbjct: 243 GYAVPERGNDEDFANLLRAFQMHFRPDNHDGVADAETAAILYALNERY 290 >UniRef50_C6X3P6 N-acetylmuramoyl-L-alanine amidase n=3 Tax=Bacteria RepID=C6X3P6_FLAB3 Length = 342 Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 105/241 (43%), Positives = 140/241 (58%), Gaps = 15/241 (6%) Query: 43 RIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGI 102 R K +++HYTA D D S+ LT + VSSHYLV + G I+QLV E + ++HAGI Sbjct: 104 RQKYIILHYTALDDDKSVMVLTQQSVSSHYLVNNL-----GDREIYQLVDENKRSYHAGI 158 Query: 103 SAWRGATRLNDTSIGIELENRGW-QKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPE 161 S WR + LNDTSIGIE+ N G+ S GVK F F+ Q++ + L KDI RY I P Sbjct: 159 STWRNDSMLNDTSIGIEIVNAGYVTDSTGVKIFPGFDEGQVKKVAALVKDIAGRYMIPPT 218 Query: 162 NVVAHADIAPQRKDDPGPLFPWQQLAQQ-GIGAWPDAQRVNFYLAGRAPHTPVDTASLLE 220 N++AH+DIAP RK DPGP FPW++L + IG W D +L P A+ + Sbjct: 219 NILAHSDIAPTRKQDPGPKFPWKKLYDEYQIGMWYDESAKQNFLNQLTPEQFSAQAAESD 278 Query: 221 LLARY-------GYDVKPD-MTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEK 272 + RY GY ++ ++ I AFQ HFRP +YNG DAE+ AI +AL +K Sbjct: 279 FIYRYQLALKNLGYGLEASGRIDDSTKKTIEAFQYHFRPEIYNGVMDAESWAILQALNQK 338 Query: 273 Y 273 Y Sbjct: 339 Y 339 >UniRef50_Q4ZZT4 N-acetylmuramoyl-L-alanine amidase, family 2 n=10 Tax=Pseudomonas RepID=Q4ZZT4_PSEU2 Length = 283 Score = 184 bits (467), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 106/259 (40%), Positives = 153/259 (59%), Gaps = 15/259 (5%) Query: 12 LLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSH 71 LLL CA G +LDT + R + +V+HYT+ + SL LT +VS+H Sbjct: 35 LLLTACA--------SGPRLDTSHPSVNFDGRAQYVVMHYTSTSLEHSLQLLTHGEVSAH 86 Query: 72 YLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGV 131 YL+ + K I++LV E AWHAG S W G T LN +SIGIE+ N G++++ Sbjct: 87 YLIGD-----DSKATIYKLVDENARAWHAGESEWEGRTWLNSSSIGIEIVNPGFKETPTG 141 Query: 132 KYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGI 191 + + P+ AQ Q++I L KDI+ R I P++++ H+DIAP RK DPGPLFPW++LA +G+ Sbjct: 142 RLWYPYTEAQTQSIIVLLKDIVKRNRIDPKHIIGHSDIAPLRKQDPGPLFPWKRLAAEGL 201 Query: 192 GAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDV-KPDMTPREQRRVIMAFQMHFR 250 G WPD ++V A A + P T + LAR GY + R+V+ AFQMH+R Sbjct: 202 GNWPDERQVAQRQALLATNLPSITW-FQQQLARLGYSTPQTGELDVATRQVLAAFQMHYR 260 Query: 251 PTLYNGEADAETQAIAEAL 269 P ++GE DA++ AI + L Sbjct: 261 PARFDGEPDAQSAAILQVL 279 >UniRef50_C0YHQ4 Possible N-acetylmuramoyl-L-alanine amidase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YHQ4_9FLAO Length = 319 Score = 179 bits (454), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 105/240 (43%), Positives = 141/240 (58%), Gaps = 14/240 (5%) Query: 43 RIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGI 102 R + L++HYTA D S+ LT + VS+HYLV G I+QLV E + ++HAG+ Sbjct: 82 RQRYLILHYTALPDDKSITVLTQQAVSAHYLV-----NNTGDNEIYQLVDENKRSYHAGV 136 Query: 103 SAWRGATRLNDTSIGIELENRGWQKSA-GVKYFAPFEPAQIQALIPLAKDIIARYHIKPE 161 SAWR LNDTSIGIE+ N G+ A G + FAPF Q++ + L KDI+ RY I+P Sbjct: 137 SAWRNDKNLNDTSIGIEIVNTGYTTDATGKRTFAPFSDDQVKKVAALVKDIVTRYQIQPT 196 Query: 162 NVVAHADIAPQRKDDPGPLFPWQQLAQQ-GIGAWPDAQRVNFYL-AGRAPHT-----PVD 214 NV+ H+DIAP RK DPGP+FPW++L + IG W D YL A +A T P Sbjct: 197 NVLGHSDIAPTRKQDPGPMFPWKKLYDEYQIGMWYDEAAKQTYLEAAQADITAKYNEPGF 256 Query: 215 TASLLELLARYGYDVKPDMT-PREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKY 273 + L ++GY + + ++ I AFQ HFRP Y+G DAET AI +AL +KY Sbjct: 257 IFLIQTSLQKFGYALDSNGQWDDATKKTIEAFQYHFRPQNYDGIMDAETWAILQALNQKY 316 >UniRef50_A4SRC8 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Aeromonas RepID=A4SRC8_AERS4 Length = 273 Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 111/255 (43%), Positives = 151/255 (59%), Gaps = 15/255 (5%) Query: 29 YQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTD--KQVSSHYLVPAVPPRYNGKPR 86 YQL +R + + RI L++HYT +D SL LT+ QVS+HYL+P + P Sbjct: 22 YQLSSRYPSASQNERIAFLILHYTDEDDAHSLRLLTEPAHQVSAHYLIPR---DTDQTPL 78 Query: 87 -IWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKS-----AGVKYFAPFEPA 140 ++QLVP+ + AWHAG S W LN +SIGIE+ N G+ A + + P+ A Sbjct: 79 PVYQLVPDSQRAWHAGRSRWHQYAGLNASSIGIEIVNLGYPPEDALLPAHQRRWQPYTQA 138 Query: 141 QIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLA-QQGIGAWPDAQR 199 QI A+ L + ++ RY I P V+AH+D+AP+RK DPGP FPW++LA G+GAWPD R Sbjct: 139 QIAAIGALTQKLVQRYRIPPTQVLAHSDVAPERKQDPGPHFPWRELALHYGVGAWPDEAR 198 Query: 200 VNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIM-AFQMHFRPTLYNGEA 258 V AP + + + LARYGY V T EQ R + AFQ+HFRP L +GE Sbjct: 199 VTALRQQPAP--AWNALTWQQQLARYGYGVALSSTWDEQSRAALRAFQLHFRPALISGEP 256 Query: 259 DAETQAIAEALLEKY 273 D ++QAI ALLE+Y Sbjct: 257 DEQSQAILTALLERY 271 >UniRef50_C7NA60 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=3 Tax=Fusobacteriaceae RepID=C7NA60_LEPBD Length = 316 Score = 172 bits (437), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 98/248 (39%), Positives = 144/248 (58%), Gaps = 12/248 (4%) Query: 31 LDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQL 90 +D+ ++ R + +++HYTA + D SL LT VSSHYLV ++ L Sbjct: 78 VDSSYTSKGQNYRQRFIILHYTAVNRDGSLRALTGNDVSSHYLVSDQK-----NDPVFYL 132 Query: 91 VPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAK 150 V E + AWHAG S W+ LND+SIGIE+ N G +G F PF+ QI+ + L + Sbjct: 133 VDENKRAWHAGASEWKTTKNLNDSSIGIEIVNNG--DVSG--RFEPFKDFQIKEVAVLVR 188 Query: 151 DIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQ-GIGAWPDAQRVNFYLAGRAP 209 +I +Y I P N++ H+DIAPQRK DPGPLFPW++L ++ IG W D+ + Y + A Sbjct: 189 HLIDKYEIPPTNILGHSDIAPQRKPDPGPLFPWEELNKKYNIGMWYDSSSKSMYESQYAS 248 Query: 210 H-TPVDTASLLELLARYGYDVKPDMTPREQ-RRVIMAFQMHFRPTLYNGEADAETQAIAE 267 + A++ +++GY V EQ + +I AFQ HFRP+ Y+G+ D ET AI + Sbjct: 249 TWDTIPAATVQAEFSKFGYAVNQTGRWDEQTKNIIKAFQYHFRPSKYDGKLDLETYAILK 308 Query: 268 ALLEKYGQ 275 AL +KY + Sbjct: 309 ALNDKYNK 316 >UniRef50_C9MVU9 N-acetylmuramoyl-L-alanine amidase domain protein n=2 Tax=Leptotrichia RepID=C9MVU9_9FUSO Length = 322 Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 102/267 (38%), Positives = 149/267 (55%), Gaps = 15/267 (5%) Query: 14 LAGCAGEKGIVEKEG-YQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHY 72 ++G G + I G +D+ ++ R + +++HYTA D D SL LT+ +VS+HY Sbjct: 65 VSGRGGMQTIRNSAGSITVDSSYSSKGQNYRQRFIILHYTAMDRDGSLRALTNNEVSAHY 124 Query: 73 LVPAVPPRYNGKPR-IWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGV 131 L+ N K ++ LV E AWHAG S W+ + LND+SIGIE+ N G + Sbjct: 125 LIS------NQKNDPVFYLVDENRRAWHAGASEWKTSKNLNDSSIGIEIVNSGNVSGS-- 176 Query: 132 KYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQ-G 190 F PF QI+ + L K + +Y I N++ H+DIAPQRK DPGPLFPW++L ++ Sbjct: 177 --FEPFRDFQIKDVAVLVKYLADKYEIPATNILGHSDIAPQRKPDPGPLFPWEELYRKYN 234 Query: 191 IGAWPDAQRVN-FYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQ-RRVIMAFQMH 248 IG W D R + F + A++ L+++GY + EQ + VI FQ H Sbjct: 235 IGMWYDNDRKSAFENEYSLSWASLPAATVQAELSKFGYSISTTGRWDEQTKNVIKVFQYH 294 Query: 249 FRPTLYNGEADAETQAIAEALLEKYGQ 275 FRP+ Y+G+ D ET AI +AL EKY + Sbjct: 295 FRPSKYDGKLDLETYAILKALNEKYNK 321 >UniRef50_Q15N79 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=4 Tax=Gammaproteobacteria RepID=Q15N79_PSEA6 Length = 818 Score = 164 bits (415), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 104/248 (41%), Positives = 140/248 (56%), Gaps = 18/248 (7%) Query: 43 RIKVLVIHYTADDFDSSLATLTDKQ-VSSHYLVP-AVPPRY-NGKPRIWQLVPEQELAWH 99 R+K LV+H+TA D+ S+ L D+ +S+HYL+P + P Y I +LV E + AWH Sbjct: 40 RVKFLVMHFTAIDYQKSVHALVDEGGLSAHYLIPESNDPSYPKDSLEILKLVDEDKRAWH 99 Query: 100 AGISAWRGATRLNDTSIGIELEN---RGWQKSAGVK---------YFAPFEPAQIQALIP 147 AG S W+G + LND+SIGIE+ N + K A F ++P QI+ LI Sbjct: 100 AGNSVWQGRSELNDSSIGIEIVNVPECHFDKEANTTSEHGENRLCVFPDYDPKQIELLIA 159 Query: 148 LAKDIIARY-HIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAG 206 L++ I+AR I P VV H+DIAP RK+DPGP FPW +L Q GIGAW + + Y Sbjct: 160 LSQQILARNPDISPTKVVGHSDIAPSRKNDPGPRFPWFELYQAGIGAWYENETFEAYWQR 219 Query: 207 RAPHTPVDTASLLELLARYGYDVKPDMTPREQ-RRVIMAFQMHFRPTLYNGEADAETQAI 265 + P + + L YGY+V EQ VI AFQMHF P G+AD++T A Sbjct: 220 FNQYQP-NIGLIQSALRAYGYNVLETGIRDEQTSNVISAFQMHFLPWQVTGKADSKTAAA 278 Query: 266 AEALLEKY 273 ALL+KY Sbjct: 279 VFALLDKY 286 >UniRef50_C0QVR5 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QVR5_BRAHW Length = 342 Score = 163 bits (413), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 101/294 (34%), Positives = 151/294 (51%), Gaps = 33/294 (11%) Query: 3 RFFWLVAAALLLAGCAGEKGI---VEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSS 59 RF +L+A L++ C E K ++ + ++ A RIK +++HYTA + D S Sbjct: 6 RFIYLLAVILVITSCNDENITPIRTRKIAPKVSSAFKSPAYNLRIKYIILHYTALNDDLS 65 Query: 60 LATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIE 119 LTD VS+HYL+ +P I++LV + + AWHAGI+ + +NDTSIGIE Sbjct: 66 FKVLTDPGVSAHYLITTRE----DEP-IYKLVDDNDRAWHAGITMFDNRHSMNDTSIGIE 120 Query: 120 LENRGWQKSAGVKY---------------FAP------FEPAQIQALIPLAKDIIARYHI 158 + N G+ + Y F P FE +QI + L K++I +Y I Sbjct: 121 IVNLGFLQKVTNTYEDLRRMTKKQREELFFIPYDEYIEFEDSQIDKVAYLLKELIEKYGI 180 Query: 159 KPENVVAHADIAPQRKDDPGPLFPWQQLAQQ-GIGAWPDAQRVNFYLAGRAPHTPVDTAS 217 KP N++ H+DIAP RK DPGP FPW++L + +G W D + +L + Sbjct: 181 KPYNILGHSDIAPYRKKDPGPKFPWKRLYDEYNLGIWYDEYDYSNFLNDNE-YRKAKVMD 239 Query: 218 LLELLARYGYDVKP--DMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEAL 269 + E +YGY P ++ + R+V+ AFQ HFRP +G D ET A+ AL Sbjct: 240 IKEEFIKYGYTSMPTNNVWDFDSRKVLYAFQCHFRPEKIDGNIDNETYAVIRAL 293 >UniRef50_C4SAC3 Negative regulator of beta-lactamase expression n=4 Tax=Proteobacteria RepID=C4SAC3_YERMO Length = 209 Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 89/189 (47%), Positives = 113/189 (59%), Gaps = 2/189 (1%) Query: 86 RIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQAL 145 RI+ LV E AWHAG+S+W T LNDTSIGIE+ N K GV F P+ QI A+ Sbjct: 18 RIFNLVDENARAWHAGVSSWAERTNLNDTSIGIEIVNLASDKE-GVWDFPPYPIEQIAAV 76 Query: 146 IPLAKDIIARY-HIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYL 204 LA +I+ RY I P NVVAH+DIAP RK DPGP+FPWQ+L ++GIGAW D ++ Sbjct: 77 KQLAANILQRYPDITPVNVVAHSDIAPTRKSDPGPMFPWQELYEEGIGAWYDIDTKEKFI 136 Query: 205 AGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQA 264 L+ YGYD + + ++ AFQ+HFRP+ Y+GE D ET A Sbjct: 137 QEFTEEGLPAKDELVTHFGTYGYDASIASSEAGYQYLVRAFQLHFRPSNYDGEVDIETAA 196 Query: 265 IAEALLEKY 273 I AL+EKY Sbjct: 197 ILYALVEKY 205 >UniRef50_C1QGN2 Negative regulator of beta-lactamase expression n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QGN2_9SPIR Length = 344 Score = 160 bits (405), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 100/293 (34%), Positives = 152/293 (51%), Gaps = 33/293 (11%) Query: 7 LVAAALLLAGCAGEKGI---VEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATL 63 + +AL+L C K ++ T ++ A RIK +++HYTA D D SL L Sbjct: 10 FLISALVLFSCNDNTSAPIRSRKIAPKISTVFKSPAYNLRIKYIILHYTALDDDLSLKVL 69 Query: 64 TDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENR 123 TD VS+HYL+ R N I++LV + AWHAG++ + +NDTSIGIE+ N Sbjct: 70 TDPGVSAHYLITT---RENDP--IYKLVDDNNRAWHAGVTMFDNRLTMNDTSIGIEIVNL 124 Query: 124 GW-QKSAGVK--------------YFAPFEP------AQIQALIPLAKDIIARYHIKPEN 162 G+ +K + +F P++ +QIQ ++ L +++I +Y +KP N Sbjct: 125 GFLEKVTNTQEQLRRMTKRERENLFFIPYDEYLEYNESQIQKVVYLLRNLIDKYGVKPYN 184 Query: 163 VVAHADIAPQRKDDPGPLFPWQQLAQQ-GIGAWPDAQRVNFYLAGRAPHTPVDTASLLEL 221 ++ H+DIAP RK DPGP FPW++L + +G W D +L + + E Sbjct: 185 ILGHSDIAPYRKKDPGPKFPWKRLHDEYNLGMWYDEYDYTNFLNDNE-YKKAKVLDIKEE 243 Query: 222 LARYGYDVKP--DMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEK 272 +YGY P ++ + R+V+ AFQ HFRP +G D E+ AI AL EK Sbjct: 244 FVKYGYTSMPTNNIWDFDSRKVLYAFQCHFRPEKIDGNIDNESYAIIRALNEK 296 >UniRef50_C7XRK8 Glutaminase n=10 Tax=Fusobacterium RepID=C7XRK8_9FUSO Length = 301 Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 95/257 (36%), Positives = 145/257 (56%), Gaps = 19/257 (7%) Query: 29 YQLDTRRQ-AQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRI 87 +Q+D+ A R++ +++HYTA D S+ LT +VSSH+LV +I Sbjct: 50 FQVDSNSYVATGKNERVQFIILHYTATDNLGSIKELTSSRVSSHFLVLD-----EDDNKI 104 Query: 88 WQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVK--------YFAPFEP 139 + LVP ++ AWHAG SA+RG T +NDTS+GIE+ + G K ++ ++P Sbjct: 105 YNLVPLEQRAWHAGASAFRGRTNINDTSVGIEIVSDGIAKEFIADPNPYHPYDHYVDYKP 164 Query: 140 AQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQ-GIGAWPD-A 197 QI+ + K + +Y+I N++AH+DIAP RK DPG FPW++L + IGAW D A Sbjct: 165 IQIEKAAQIIKYVAEKYNIPARNILAHSDIAPSRKKDPGAKFPWKELYDKYNIGAWYDEA 224 Query: 198 QRVNFYLAGRAPHTPVDTASLLELLARYGYDV-KPDMTPREQRRVIMAFQMHFRPTLYNG 256 + F + T + + + L +YGY++ + D +E + V+ AFQ+HF P G Sbjct: 225 DKQEFMDEEKFNATSI--REIKDELRKYGYEINRFDEWDKESKDVVYAFQLHFNPKNPTG 282 Query: 257 EADAETQAIAEALLEKY 273 E D ET AI +AL +KY Sbjct: 283 EMDLETFAILKALNKKY 299 >UniRef50_A4CAP2 Probable N-acetylmuramoyl-L-alanine amidase n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CAP2_9GAMM Length = 303 Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 97/266 (36%), Positives = 137/266 (51%), Gaps = 25/266 (9%) Query: 31 LDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVP----AVPPRYNGKPR 86 + T+ +++ RI+ LV+HYT D+ SL LT +VSSHYL+P A P+ Sbjct: 21 VSTQFRSENYNSRIRFLVMHYTTGDWQDSLQALTKGEVSSHYLIPEQGDASYPK--SHLA 78 Query: 87 IWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENR-----------------GWQKSA 129 +++LV EQ AWHAG+S W+G + +ND SIGIEL NR + + Sbjct: 79 VYRLVDEQHRAWHAGVSHWQGRSNINDQSIGIELINRAACAHQPQVLTEIAPSAAFFDNQ 138 Query: 130 GVKYFAPFEPAQIQALIPLAKDIIARY-HIKPENVVAHADIAPQRKDDPGPLFPWQQLAQ 188 + F+ QIQ LI L+KDI+AR I P VV H+DI K DPGP FPW L Q Sbjct: 139 TFCQYPNFDLQQIQLLIELSKDILARNPDIDPTAVVGHSDIQLGNKQDPGPHFPWYTLYQ 198 Query: 189 QGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVK-PDMTPREQRRVIMAFQM 247 GIGAW + + + A + L +YGY ++ ++ + AFQ+ Sbjct: 199 HGIGAWYEHATASDHWQALLTEGLPTVAQVQCNLQKYGYGIEITGEFDKQTFNTVKAFQL 258 Query: 248 HFRPTLYNGEADAETQAIAEALLEKY 273 HF P GE +T A+ AL++KY Sbjct: 259 HFLPWQATGEITIKTVAVLFALMDKY 284 >UniRef50_B6JBX5 Negative regulator of AmpC, AmpD n=3 Tax=Alphaproteobacteria RepID=B6JBX5_OLICO Length = 273 Score = 150 bits (378), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 90/219 (41%), Positives = 130/219 (59%), Gaps = 17/219 (7%) Query: 44 IKVLVIHYTA-DDFDSSLATLTDKQ--VSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHA 100 ++++V+HYT + D++LA L D + VSSHY+V R NG+ + QLV E++ AWHA Sbjct: 48 VELIVLHYTGMPEEDAALARLCDAEAKVSSHYVV-----RENGE--VVQLVAEEKRAWHA 100 Query: 101 GISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKP 160 G+S WRGA+ +N SIGIE+ N G P+ QI A+I L +DI+AR I+ Sbjct: 101 GVSCWRGASDINSRSIGIEIVNPGHDGDC-----PPYPDPQIAAVIALCRDILARNGIRR 155 Query: 161 ENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLE 220 + V+AH+DIAP RK DPG FPW +LA +G+G W + ++ A + A+ + Sbjct: 156 DQVLAHSDIAPTRKQDPGEWFPWGRLAAEGVGLWVEPAPLDD--TSGAEADAGEAAAFIG 213 Query: 221 LLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEAD 259 LA YGY + P P + V+ AFQ HFRP +G+ D Sbjct: 214 ALAGYGYGITPADPPEVKAAVVAAFQRHFRPARGDGKVD 252 >UniRef50_A5V2C7 N-acetylmuramoyl-L-alanine amidase, family 2 n=6 Tax=Sphingomonadales RepID=A5V2C7_SPHWW Length = 241 Score = 147 bits (371), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 100/231 (43%), Positives = 131/231 (56%), Gaps = 31/231 (13%) Query: 44 IKVLVIHYTA-DDFDSSLATLTDKQ--VSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHA 100 I +LV+HYT D S++A LTD + VSSHYLV +G+ + +LVPE AWHA Sbjct: 22 ITMLVLHYTGMADAASAIARLTDPEAKVSSHYLVAE-----DGQ--VMRLVPEDRRAWHA 74 Query: 101 GISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKP 160 G S+WRG T +N SIGIE+ N G + + PF Q+ ALIPL DI +R+ I+P Sbjct: 75 GQSSWRGVTDVNSASIGIEIVNPGHELG-----YRPFPKPQMDALIPLISDITSRHPIEP 129 Query: 161 ENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPH-TPVDTASLL 219 NVV H+D+AP+RK DPG LF W+ L + G+ +R LA PH TP L Sbjct: 130 ANVVGHSDVAPRRKQDPGELFDWELLGKLGLA----LRRPRHGLAD--PHWTP---GGFL 180 Query: 220 ELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALL 270 L R+GYDV + ++AFQ FRP +G AD E +AI LL Sbjct: 181 LALDRFGYDVS------DGPAAVIAFQRRFRPERIDGIADGECRAILLRLL 225 >UniRef50_A9M6A2 Protein ampD n=39 Tax=Proteobacteria RepID=A9M6A2_BRUC2 Length = 268 Score = 140 bits (353), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 88/223 (39%), Positives = 128/223 (57%), Gaps = 22/223 (9%) Query: 47 LVIHYT----ADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGI 102 L++HYT A + L + + +VS+HY+V + R+ Q+V E+ AWHAG Sbjct: 45 LILHYTGLVTAKEAMDVLKS-PEMEVSAHYVV-------HEDGRVVQMVSEKARAWHAGK 96 Query: 103 SAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPEN 162 S W+G T +N SIGIE+ N G ++ + PF AQI+A+I L +DI R+ I+PEN Sbjct: 97 SFWKGETDINSASIGIEIVNPGV-----LENYPPFHDAQIEAVIRLCQDICKRHEIRPEN 151 Query: 163 VVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRV--NFYLAGRAPHTPVDTASLLE 220 V+AH+DIAP RK DPG FPW++L GIG + + + +LA PV+ +L Sbjct: 152 VLAHSDIAPARKTDPGQSFPWKRLHDAGIGHYVEPTPICGGRFLARGEQGQPVE--ALQS 209 Query: 221 LLARYGYDVKPDMTPREQRRVIM-AFQMHFRPTLYNGEADAET 262 +LA YGY++ E +++ AFQ HFRP +G AD T Sbjct: 210 MLALYGYEIAITGIFDEATEIVIKAFQRHFRPQNVDGVADVST 252 >UniRef50_B3ESH1 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ESH1_AMOA5 Length = 322 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 97/252 (38%), Positives = 137/252 (54%), Gaps = 26/252 (10%) Query: 44 IKVLVIHYTADDFDSSLATLT----DKQVSSHYLVPAVP-PRYNGKPRIWQLVPEQELAW 98 I LV+HYT +F +++ T + +VS+HY+V R ++Q+VPE++ AW Sbjct: 74 IAYLVMHYTVCNFPATMRLFTSDIPEGRVSAHYVVTEEERERDVQGGMVFQVVPEEKTAW 133 Query: 99 HAGISAWRGATRLNDTSIGIELENRGW--QKSAGVKYFAPFEPAQIQALIPLAKDIIARY 156 HAGIS WRG LN SIG+E N+G+ ++S +F F+ QI++L L++ I+ Y Sbjct: 134 HAGISYWRGEQGLNLRSIGVENVNKGFVGKESEYPNWFT-FDKKQIRSLGTLSQYIVNSY 192 Query: 157 HIKPENVVAHADIAPQRKDDPGPLFPWQQL-AQQGIGAW-PDAQRVNFYLAGRAPHTP-- 212 +I P+NVV HADIAP RK DPG LFPW++L G+GAW + +R +A R TP Sbjct: 193 NIAPQNVVGHADIAPTRKQDPGILFPWEKLYTHYGVGAWLTEDERDEKAIAER--FTPKE 250 Query: 213 -----VDTASLLELLARYGYDVKPD--MTPREQRRVIMAFQMHFR----PTLYNGEADAE 261 + A LL L YGY+ MTP E ++ AF+ HF P Y+ D Sbjct: 251 KLPQGISEAFLLTCLQAYGYNCTEVGYMTP-ENTSIVKAFKAHFSRNQYPYTYDASIDRT 309 Query: 262 TQAIAEALLEKY 273 L EKY Sbjct: 310 DMLWVWGLSEKY 321 >UniRef50_C6XME2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XME2_HIRBI Length = 236 Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 88/244 (36%), Positives = 123/244 (50%), Gaps = 35/244 (14%) Query: 23 IVEKEGYQLDTRRQAQAAYPRIKVLVIHYTA-DDFDSSLATLTD--KQVSSHYLVPAVPP 79 I++ D RRQ + +LV+HYT ++L + D +V++HY+V Sbjct: 8 IIQAPSVNFDERRQP------LSMLVLHYTGMQTGQAALGRMCDPEAKVAAHYMVEE--- 58 Query: 80 RYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAP-FE 138 RI+QLV E + AWHAG+ WRG +N SIGIE+ N G Y P F Sbjct: 59 ----DGRIFQLVDESKRAWHAGVGTWRGLDDINSRSIGIEIVN------GGHDYGLPDFP 108 Query: 139 PAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQ 198 QI A+I L +D+++R+ I ++V H+DIAP RKDDPG FPW++LA GIG WPD Sbjct: 109 EIQIDAVIALCRDVLSRHQILQSDIVGHSDIAPGRKDDPGEKFPWEKLAHAGIGLWPDES 168 Query: 199 RVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEA 258 + + +ELLA GY + + +E VI AFQ + GE Sbjct: 169 KKALSVGS------------VELLAEIGYGLNASPSDQEITCVIRAFQQRWMQDNVTGEP 216 Query: 259 DAET 262 ET Sbjct: 217 CLET 220 >UniRef50_Q4FPN2 Probable N-acetylmuramoyl-L-alanine amidase n=2 Tax=Candidatus Pelagibacter ubique RepID=Q4FPN2_PELUB Length = 247 Score = 136 bits (343), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 82/238 (34%), Positives = 126/238 (52%), Gaps = 18/238 (7%) Query: 43 RIKVLVIHYTADDFDS-SLATLTDKQ--VSSHYLVPAVPPRYNGKPRIWQLVPEQELAWH 99 +IK ++ HYT +S +L LT+ Q VS HYL+ + NG+ I ++VP+ +AWH Sbjct: 22 QIKFIIFHYTGMKSESDALKRLTEIQSEVSCHYLI-----KNNGE--IVKIVPDLYIAWH 74 Query: 100 AGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIK 159 AG S+W+ LN SIGIE+ N G + + F QI L+ L+K +I +Y I Sbjct: 75 AGKSSWKNYKSLNQNSIGIEITNPGHEYG-----YKNFTQKQITTLVKLSKFLIKKYKIN 129 Query: 160 PENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLL 219 P+N++ H+DIA RK DPG FPW+ LA+ IG W + + + + V+ Sbjct: 130 PKNILGHSDIAVLRKKDPGEKFPWEYLAKNKIGIWHTLNKQDLLKNRKLKISKVEENIFF 189 Query: 220 ELLARYGYD-VKPDMTPREQRRV--IMAFQMHFRPTLYNGEADAETQAIAEALLEKYG 274 L + GY P R + + I +FQ FR L +G+ D E+ I ++L++ Y Sbjct: 190 RNLFKIGYSKTFPKNIGRNKYLIELIKSFQRRFRQELVDGKIDQESLLINKSLIKAYN 247 >UniRef50_C6QHF6 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QHF6_9RHIZ Length = 256 Score = 136 bits (342), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 91/233 (39%), Positives = 123/233 (52%), Gaps = 17/233 (7%) Query: 43 RIKVLVIHYTA-DDFDSSLATLT--DKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWH 99 R +L++HYT + ++ L + VS HY++ + RI QLVPE AWH Sbjct: 27 RPSLLILHYTGMSSAEKAIDWLARAESNVSCHYVI-------DEDGRITQLVPESLRAWH 79 Query: 100 AGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIK 159 AG S WRG T +N SIGIE++N G Q + F AQ+QA+I L KDI R+ + Sbjct: 80 AGASFWRGETDINSHSIGIEIQNPGHQHG-----YPDFPAAQMQAVIALGKDIAQRHRMA 134 Query: 160 PENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAG-RAPHTPVDTASL 218 + V+AH+DIAP RK DPG F W LA+QG+G W V+ G + A+ Sbjct: 135 ADAVLAHSDIAPGRKIDPGEKFNWALLARQGLGLWVRPSSVHADDPGLDIGASGSRVAAA 194 Query: 219 LELLARYGYDV-KPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALL 270 ELLA YGY V + + V+ AFQ HFRP +G D T+ E L+ Sbjct: 195 QELLALYGYRVEQSGILDDGTSHVLKAFQAHFRPRRVDGRLDRSTELTLERLI 247 >UniRef50_Q0BV14 Anhydro-N-acetylmuramyl-tripeptide amidase n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BV14_GRABC Length = 250 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 99/257 (38%), Positives = 133/257 (51%), Gaps = 33/257 (12%) Query: 23 IVEKEGYQLDTRRQAQAAYP-RIKVLVIHYTA-DDFDSSLATLTDKQ--VSSHYLVPAVP 78 I E+ D R A A P + +LV+HYT +++ L D + VSSHY+V Sbjct: 11 IRERPSPNYDARPSATAGTPGAVDMLVLHYTGMTSAAAAIDRLCDPEARVSSHYVV---- 66 Query: 79 PRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFE 138 +G +W+LV EQ AWHAGIS WRG + LND S+GIE+ N G + + F Sbjct: 67 -EEDGT--VWRLVWEQYRAWHAGISHWRGRSWLNDFSVGIEIVNPGHEWG-----YRAFP 118 Query: 139 PAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQ 198 AQ+++++ LA I+ ++ I ++VAH+DIAP RK DPG LF W+ LAQ GIG WPDA Sbjct: 119 EAQMRSVLALAHAIVRQHSIPAAHIVAHSDIAPDRKQDPGELFDWRWLAQHGIGVWPDAT 178 Query: 199 RVNFYLAGRAPHTPVDTASLLELLARYGY--DVKPDMTPREQRRVIMAFQMHFRPTLYNG 256 V P + L R GY D+ DM V+ AFQ F P +G Sbjct: 179 PVK--------DRPKQENDPWDFLRRIGYRTDLPLDM-------VLRAFQRRFLPDRPDG 223 Query: 257 EADAETQAIAEALLEKY 273 ADA T A + Y Sbjct: 224 SADAATLARLATVAHAY 240 >UniRef50_Q2RVT4 AmpD (Negative regulator of AmpC) n=2 Tax=Rhodospirillaceae RepID=Q2RVT4_RHORT Length = 241 Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 90/229 (39%), Positives = 121/229 (52%), Gaps = 26/229 (11%) Query: 44 IKVLVIHYTA-DDFDSSLATLTD--KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHA 100 I +LVIHYT ++LA L D QVS+H+L+ + ++LV E+ AWHA Sbjct: 29 IDMLVIHYTGMPSAQAALARLLDPQAQVSAHWLI-------DEDGTAYKLVEERRRAWHA 81 Query: 101 GISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKP 160 G+SAW G +N SIGIEL N G + + PF AQ+ LI L + I+ R+ I Sbjct: 82 GVSAWGGRPGVNARSIGIELVNPGHEFG-----YRPFPEAQMTTLIALGRGILERHPIPA 136 Query: 161 ENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLE 220 +VV HAD+AP RK+DPG LF WQ+LA GIG WP L R Sbjct: 137 AHVVGHADVAPTRKEDPGELFDWQRLASNGIGRWPPPP-----LGVRPETVDATEGEAAC 191 Query: 221 LLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEAL 269 LL + GYD+ + ++AFQ HFRP +G D+ET + +AL Sbjct: 192 LLEQIGYDIS------SLQATVLAFQRHFRPKRLDGRIDSETLWLIKAL 234 >UniRef50_B6BSD7 Probable N-acetylmuramoyl-L-alanine amidase YbjR n=1 Tax=Candidatus Pelagibacter sp. HTCC7211 RepID=B6BSD7_9RICK Length = 248 Score = 134 bits (336), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 76/230 (33%), Positives = 119/230 (51%), Gaps = 16/230 (6%) Query: 44 IKVLVIHYTA-DDFDSSLATLTDKQ--VSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHA 100 +K ++ HYT + ++ LT+ + VSSHYL+ + NG+ I LVP+ +AWHA Sbjct: 26 VKFIIFHYTGMKKENQAITRLTNSKSKVSSHYLI-----KNNGE--ILTLVPDLYVAWHA 78 Query: 101 GISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKP 160 GIS+W+ +N SIGIE+ N G + S + F Q++++I L+ +I +Y+IKP Sbjct: 79 GISSWKNYKSINKYSIGIEISNPGHEYS-----YKKFSKEQVKSIIKLSTYLIKKYNIKP 133 Query: 161 ENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLE 220 ++ H+DIAP RK DPG FPW+ L++ IG W + + + ++ Sbjct: 134 NFILGHSDIAPDRKKDPGEKFPWKYLSKNKIGHWHNLNEKKIFKKRNLTEGKKEKIKFIK 193 Query: 221 LLARYGYDVKPDMTPREQRRVI-MAFQMHFRPTLYNGEADAETQAIAEAL 269 L GY + +++ AFQ FR L NG D E I+ L Sbjct: 194 NLYEIGYPKNILFNKYKYSKLLTTAFQRRFRQELVNGIIDQECLVISNNL 243 >UniRef50_B0T844 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=6 Tax=Alphaproteobacteria RepID=B0T844_CAUSK Length = 243 Score = 134 bits (336), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 90/257 (35%), Positives = 132/257 (51%), Gaps = 23/257 (8%) Query: 22 GIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTA-DDFDSSLATLTDKQ--VSSHYLVPAVP 78 G V+ D R+ +V+HYT + +++LA + D + VS+HY+V Sbjct: 6 GFVDAPSPNFDARKSVP------DCVVLHYTGMETGEAALARMCDPEAKVSAHYMV---- 55 Query: 79 PRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFE 138 R+++LVPE+ AWHAG + W+G +N SIG+E+ N G + + PF Sbjct: 56 ---EEDGRVFRLVPEERRAWHAGAAFWKGVKDINSASIGVEIVNPGHEFG-----YRPFP 107 Query: 139 PAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQ 198 AQ+ A+I L DI +R+ I + ++ H+DIAP RK DPG LFPW++LAQ G G W + Sbjct: 108 DAQVAAVINLLADIRSRWTIDDDRILGHSDIAPGRKIDPGELFPWKRLAQAGHGLWVEPP 167 Query: 199 RVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPRE-QRRVIMAFQMHFRPTLYNGE 257 G+ +L L R GY+ P E V+ AFQ H+ T ++G Sbjct: 168 PSPGAPLGQGEEG-TGVFALQAGLTRLGYNCPPSGNYDEWTATVVAAFQRHWLQTRFDGV 226 Query: 258 ADAETQAIAEALLEKYG 274 AD ET+A ALL G Sbjct: 227 ADGETRARLVALLRAAG 243 >UniRef50_Q07PU2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=33 Tax=Alphaproteobacteria RepID=Q07PU2_RHOP5 Length = 294 Score = 133 bits (335), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 90/233 (38%), Positives = 120/233 (51%), Gaps = 22/233 (9%) Query: 46 VLVIHYTA-DDFDSSLATLTD--KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGI 102 ++V+HYT D + +LA L +VS+HY+V RI Q VPE + AWHAG+ Sbjct: 58 MIVLHYTGMPDVEGALARLCQDGTEVSAHYVVLE-------DGRIVQCVPEAKRAWHAGL 110 Query: 103 SAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPEN 162 + W G +N SIGIE+ NRG + F Q+ A+I L + II R I+P Sbjct: 111 AFWAGEEDINSCSIGIEIVNRGHDWG-----YPDFPLRQVAAVIALCRGIIIRRGIQPHR 165 Query: 163 VVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLEL- 221 V+AH+D+AP RK DPG FPW+ L G+G W A + + G D ++L L Sbjct: 166 VLAHSDVAPARKQDPGEKFPWRALWDSGVGHWVPAAPI---VRGDVMKLGSDGDAVLALQ 222 Query: 222 --LARYGYDVKPD-MTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLE 271 LA YGY + P V+ AFQ HFRP +G AD T A ALL Sbjct: 223 RALAEYGYGLTPSGHYNAATAEVVTAFQRHFRPQKVDGIADTSTLATLHALLS 275 >UniRef50_A5CBZ0 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Orientia tsutsugamushi RepID=A5CBZ0_ORITB Length = 366 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 83/230 (36%), Positives = 119/230 (51%), Gaps = 26/230 (11%) Query: 44 IKVLVIHYTADDFDSSLATLTDK-----QVSSHYLVPAVPPRYNGKPRIWQLVPEQELAW 98 IK L++HYT +F S+ T QVSSH ++ + VPE ++A+ Sbjct: 104 IKYLIMHYTVCNFSSTAQEFTVNKPLLGQVSSHIVITEAEEGKTPAGILISFVPENKIAY 163 Query: 99 HAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHI 158 HAG+SAW+ T LN SIGIE NRG+ K + ++ QI ++ II RY+I Sbjct: 164 HAGVSAWQNDTNLNSMSIGIEHVNRGFNTVNAKKEWVCYDKHQIATSGIVSSGIIRRYNI 223 Query: 159 KPENVVAHADIAPQRKDDPGPLFPWQQLAQQ-GIGAW-PDAQRVNFYLAGRAPHTP---- 212 KP +V+ H+DIA RK DPGPLFPW QL + +GAW DA+ + Y+ + + P Sbjct: 224 KPIHVLGHSDIAYNRKSDPGPLFPWGQLYHEYNVGAWLTDAELNSQYI--KEKYNPKISD 281 Query: 213 ---VDTASLLELLARYGYDV----------KPDMTPREQRRVIMAFQMHF 249 +D + L+LL YGY + P T +I+AF+ HF Sbjct: 282 PDKIDDITFLKLLQEYGYHIPDNVDLNKTDNPKQTVALCAPLILAFKAHF 331 >UniRef50_A5FA27 N-acetylmuramoyl-L-alanine amidase, family 2 n=2 Tax=Bacteroidetes RepID=A5FA27_FLAJ1 Length = 301 Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 68/154 (44%), Positives = 90/154 (58%), Gaps = 19/154 (12%) Query: 47 LVIHYTA-DDFDSSLATLTDK--QVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGIS 103 ++IH+TA D ++ T T QVSSHY++ NGK + Q++ + AWHAG S Sbjct: 102 VIIHHTAQDSLQQTINTFTKTRTQVSSHYIISE-----NGK--VVQMLNDYLRAWHAGNS 154 Query: 104 AWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENV 163 W T LN +SIGIEL+N G F PF AQI +L+ L + Y+I +N Sbjct: 155 TWGKNTDLNSSSIGIELDNNG---------FKPFTEAQISSLVALLTKLKKDYNIPTQNF 205 Query: 164 VAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDA 197 + HADIAP RK DP LFPW+ LA++G G WPDA Sbjct: 206 LGHADIAPGRKQDPSALFPWKTLAEKGFGIWPDA 239 >UniRef50_B6IRH2 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Rhodospirillum centenum SW RepID=B6IRH2_RHOCS Length = 254 Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 87/224 (38%), Positives = 121/224 (54%), Gaps = 31/224 (13%) Query: 44 IKVLVIHYTA-DDFDSSLATLTD--KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHA 100 I +LV+HYT + +L L D +VS+HY++ + +++LV E AWHA Sbjct: 23 IDMLVLHYTGMRTAEEALERLCDPAAEVSAHYVI-------DEDGTLYRLVREDRRAWHA 75 Query: 101 GISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKP 160 G+S WRG +N SIGIEL N G + PF AQ+ L LA D++A Y I P Sbjct: 76 GLSFWRGERDVNSRSIGIELVNPGHAFG-----YRPFPEAQMATLESLAADLVAHYRIPP 130 Query: 161 ENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLE 220 +V+ H+D+AP RK+DPG LF W +LA+ GIGAWP+ A AP T + AS Sbjct: 131 LHVLGHSDVAPARKEDPGELFDWPRLARAGIGAWPEPA-----AADDAPWTEAEVAS--- 182 Query: 221 LLARYGYDVKP------DMTPREQR--RVIMAFQMHFRPTLYNG 256 LLA GY+ P D T + +V+ AF+ H+ P +G Sbjct: 183 LLAAVGYEPLPSPGTAWDGTAWDGTAGQVLTAFRRHWHPAALSG 226 >UniRef50_UPI0001793312 PREDICTED: hypothetical protein n=1 Tax=Acyrthosiphon pisum RepID=UPI0001793312 Length = 276 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 87/249 (34%), Positives = 132/249 (53%), Gaps = 26/249 (10%) Query: 43 RIKVLVIHYTADDFDSSLATLTDKQ------VSSHYLVPAVPPRYNGKPRIWQLVPEQEL 96 +IK++V+H+T DF +++ T K+ VSSHY++ A P ++ Q+VPE + Sbjct: 36 KIKIIVLHFTGIDFGATVKEFTSKRSNTSRNVSSHYVI-ARPTEAGTHNQLLQVVPENYV 94 Query: 97 AWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARY 156 ++HAGIS W + +N SIGIE+ N G+ +A + PF QI + + ++ +Y Sbjct: 95 SYHAGISLWGNYSSINSISIGIEIVNYGY--NATNDSWDPFYQDQISIVGLMVARMVNQY 152 Query: 157 HIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQ-GIGAWPDAQRVN--FYLAGRAPHTPV 213 + P NVV H+DIAP RK DPG +FPW QL + GIGAW D +N ++ +P TP Sbjct: 153 KVLPHNVVGHSDIAPNRKIDPGVMFPWSQLYKNYGIGAWLDDDEMNETVIISKYSPSTPC 212 Query: 214 ----DTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHF----RPTLYNGEADAETQAI 265 D + L YGY++ ++ + I AF+ HF +P LYN Sbjct: 213 PCTPDQKLFVNYLGVYGYNISDEI------KAIKAFKAHFTANQKPKLYNSLITRLEMYW 266 Query: 266 AEALLEKYG 274 AL+ KY Sbjct: 267 IWALVAKYS 275 >UniRef50_B2IHS0 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=26 Tax=Alphaproteobacteria RepID=B2IHS0_BEII9 Length = 304 Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 90/229 (39%), Positives = 120/229 (52%), Gaps = 18/229 (7%) Query: 47 LVIHYTAD-DFDSSLATLTD--KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGIS 103 +++H+TA +++L L D +VS+HYLV +G RI QLV E+ AWHAG S Sbjct: 43 IILHHTAMVSGEAALLRLCDPAAEVSAHYLV-----WEDG--RISQLVAEKHRAWHAGQS 95 Query: 104 AWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENV 163 W G +N SIGIEL + G + + P+E AQI A I L DI+ R I V Sbjct: 96 YWAGERDMNSVSIGIELVHPGPEGGS-----PPYEEAQIAATIALCLDIMRRRSIPAARV 150 Query: 164 VAHADIAPQRKDDPGPLFPWQQLAQQGIGAW-PDAQRVNFYLAGRAPHTPVDTASLLELL 222 + H DIAP RKDDP FPW QLA G+G + P + V H +L LL Sbjct: 151 LGHCDIAPDRKDDPSAHFPWAQLAAAGVGLYVPPSPIVEGPRHQNGEHG-QHIETLQSLL 209 Query: 223 ARYGYDVK-PDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALL 270 A GY + ++ + V+ AFQ H+RP L +G AD T +ALL Sbjct: 210 AILGYGLSITNLYGMKTEAVVRAFQRHYRPALIDGIADVSTIETLKALL 258 >UniRef50_Q2NVA7 Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NVA7_SODGM Length = 201 Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 77/220 (35%), Positives = 101/220 (45%), Gaps = 35/220 (15%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVP 92 + R + R++ L++HYTA DF S+ L+ Sbjct: 8 SYRSVKGFNSRVRFLIMHYTAVDFAGSVRALSSD-------------------------- 41 Query: 93 EQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDI 152 A SAW G LNDTSIGIE N K+ G F P+ P QI A+I LA+DI Sbjct: 42 -------AAFSAWAGRNNLNDTSIGIENVNLASVKN-GKLIFPPYHPVQIAAIIQLAQDI 93 Query: 153 IARY-HIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHT 211 + RY I P ++ H+D+AP RK DPG FPWQ L GIGAW D +YL A Sbjct: 94 LQRYPDITPTQIIGHSDVAPGRKFDPGAAFPWQTLFTAGIGAWFDEATKQYYLDEFAGQG 153 Query: 212 PVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRP 251 D A+++ L YGY+ + +I AF F P Sbjct: 154 LPDQAAIIGKLKAYGYNTSGATDASVYKNLIQAFPTAFPP 193 >UniRef50_A3HXI6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Algoriphagus sp. PR1 RepID=A3HXI6_9SPHI Length = 299 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 90/286 (31%), Positives = 127/286 (44%), Gaps = 63/286 (22%) Query: 5 FWLVAAALLLAGCAG----------EKGIVE-----------KEGYQLDTRR-------Q 36 F+L+ +LL+ CA EK + + KE DT Sbjct: 10 FFLICVSLLIVSCASNPYKKINKEYEKNVKDVSAAYLEIPKTKEELNYDTLSITDEWVGT 69 Query: 37 AQAAYPRIKVLVIHYTA-DDFDSSLATLT--DKQVSSHYLVPAVPPRYNGKPRIWQLVPE 93 + R ++IH+TA D + ++ T T QVSSHY++ I Q++ + Sbjct: 70 TNFSIRRPNFVIIHHTAQDSLEQTIRTFTLPRTQVSSHYVIAK-------DGTIVQMLND 122 Query: 94 QELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDII 153 +WHAG W T LN SIGIEL+N G F PF AQI++L+ L K + Sbjct: 123 YLRSWHAGRGKWGSVTDLNSVSIGIELDNNG---------FEPFPEAQIESLLILCKRLK 173 Query: 154 ARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPV 213 +Y I N + H+DIAP RK DP FPW QLA +G G W D V + + T + Sbjct: 174 WKYGIPTANFIGHSDIAPSRKVDPNRFFPWDQLAMEGYGFWYDVDEVFPVINPKDDQTSI 233 Query: 214 ---DTASLLE-------LLARYGYDVKPDMTPREQRRVIMAFQMHF 249 +T +LL+ L GYDV P I +F++HF Sbjct: 234 PLENTDTLLKDSFDPIMALRIIGYDVS---VP---SNAIQSFKLHF 273 >UniRef50_C7PRR2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PRR2_CHIPD Length = 275 Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 80/232 (34%), Positives = 113/232 (48%), Gaps = 38/232 (16%) Query: 47 LVIHYTAD-DFDSSLATLT--DKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGIS 103 ++IH+TA D++ T T QVS+HY++ I ++ + AWHAGI+ Sbjct: 74 VIIHHTAQGSCDTTFNTFTLPRTQVSAHYVICK-------DGTINHMLNDYLRAWHAGIA 126 Query: 104 AWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENV 163 W T +N SIGIEL+N G PF+P QI +L+ L + R++I N Sbjct: 127 KWGNVTDMNSCSIGIELDNNG---------LTPFQPQQINSLLVLLDSLKHRFNIPAANF 177 Query: 164 VAHADIAPQRKDDPGPLFPWQQLAQQGIGAW-PDAQRVNFYLAGRAPHTPVDTASLLELL 222 + H DIAP RK DP FPWQQLA++G G W D ++ P D +S + L Sbjct: 178 IGHGDIAPGRKVDPSAWFPWQQLAEKGFGLWYGDTSKIII---------PGDFSS-KQAL 227 Query: 223 ARYGYDVKPDMTPREQRRVIMAFQMHFRP--TLYNGEADAETQAIAEALLEK 272 GYD R+ I AF+ HF P T + D + I +L+EK Sbjct: 228 RIVGYDT------RDTVAAIKAFKRHFVPTDTTNSTSLDEGERKILFSLMEK 273 >UniRef50_Q28T26 Negative regulator of AmpC AmpD n=39 Tax=Rhodobacterales RepID=Q28T26_JANSC Length = 227 Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 81/235 (34%), Positives = 113/235 (48%), Gaps = 37/235 (15%) Query: 45 KVLVIHYTA-DDFDSSLATLTD--KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAG 101 +++VIHYTA + S+ L D ++VS+HYL+ + LVPE AWHAG Sbjct: 21 ELVVIHYTAMPNCASAAKVLCDPAREVSAHYLI-------GRDGDVLNLVPEDMRAWHAG 73 Query: 102 ISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPE 161 WRGA +N SIGIEL+N G PF + AL L ++A + I P+ Sbjct: 74 KGEWRGAGDVNSRSIGIELDNDG---------LTPFSEPLMAALETLLPTVLAAWRIGPD 124 Query: 162 NVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLEL 221 V+ H+D+AP RK DPG F WQ+LA+QG+ W +A VD A Sbjct: 125 GVIGHSDMAPGRKIDPGRRFDWQRLARQGLAVW-----------SQASGDTVDAARFRGD 173 Query: 222 LARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKYGQD 276 +GY DM + ++ +M FRP +G D AI + +YG D Sbjct: 174 AQAFGYG---DM---DDTLLLDVVRMRFRP-WASGPLDGTDCAIMADIAARYGLD 221 >UniRef50_A8TR24 Negative regulator of beta-lactamase expression n=1 Tax=alpha proteobacterium BAL199 RepID=A8TR24_9PROT Length = 247 Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 79/232 (34%), Positives = 114/232 (49%), Gaps = 30/232 (12%) Query: 44 IKVLVIHYT-ADDFDSSLATLTD--KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHA 100 I +L++HYT + +L + D QVS+HYLV R+W++V E AWHA Sbjct: 24 IDILLLHYTDMTRAEDALDRMCDPAAQVSAHYLV-------GEDGRVWRMVAEDRRAWHA 76 Query: 101 GISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKP 160 G+S W G + +N SIGIE+ N G + PF Q+ AL L + I+AR+ I Sbjct: 77 GVSWWDGDSDINSRSIGIEISNPGHSHG-----YRPFPDVQMSALESLCRGILARHPIPA 131 Query: 161 ENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHT--PVDTASL 218 V+ H+D++P RK DPG LF W LA +GIG WP AP T P D A+ Sbjct: 132 NRVLGHSDVSPGRKIDPGHLFDWHWLASRGIGLWPTDP---------APATLQPEDIAAA 182 Query: 219 LELLARYGYDV-KPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEAL 269 L + GY + +M + + AF+ H+ P D + +A+ Sbjct: 183 LGTI---GYRIGGAEMADPAAQSALWAFRRHWCPQSLKHPLDRHVGGVLKAV 231 >UniRef50_B9NMR2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NMR2_9RHOB Length = 227 Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 64/151 (42%), Positives = 86/151 (56%), Gaps = 19/151 (12%) Query: 46 VLVIHYTA-DDFDSSLATLTD--KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGI 102 ++V+HYTA D +L L D +VS+HYL+ +WQLV E + AWHAG Sbjct: 28 LIVLHYTAMHSADDALERLCDPAHEVSAHYLI-------GRDGTLWQLVHEPDRAWHAGA 80 Query: 103 SAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPEN 162 W G T +N SIGIEL+N G PF Q+ AL L DI+ R++I P+ Sbjct: 81 GEWHGQTDINSRSIGIELDNAGTH---------PFAAPQMSALDHLLPDIMGRWNIPPQG 131 Query: 163 VVAHADIAPQRKDDPGPLFPWQQLAQQGIGA 193 V+ H+D+AP RK DPGP F WQ+L +Q + A Sbjct: 132 VIGHSDMAPGRKIDPGPKFDWQRLERQNLAA 162 >UniRef50_D0CW21 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CW21_9RHOB Length = 418 Score = 110 bits (274), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 66/166 (39%), Positives = 95/166 (57%), Gaps = 28/166 (16%) Query: 45 KVLVIHYTA-DDFDSSLATLTD--KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAG 101 ++V+HYTA + ++L L D +VS+HYL+ +G +WQ+V E++ AWHAG Sbjct: 218 SLVVLHYTAMNSARAALERLCDPESEVSAHYLIGC-----DGT--LWQMVREEDRAWHAG 270 Query: 102 ISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPE 161 + W+G + +N SIGIEL+NRG PF AQI+ L L I+ R+ I Sbjct: 271 VGEWQGQSDINSRSIGIELDNRG---------DHPFAQAQIRVLERLLPQIMTRWSIPAA 321 Query: 162 NVVAHADIAPQRKDDPGPLFPWQQLAQQGIGA---------WPDAQ 198 V+ H+D+AP RK DPGP F W +L +QG+ A WP+AQ Sbjct: 322 GVIGHSDMAPGRKHDPGPRFDWLRLERQGLAAPRAHAAHLSWPEAQ 367 >UniRef50_C7D9N0 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=Thalassiobium sp. R2A62 RepID=C7D9N0_9RHOB Length = 237 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 75/213 (35%), Positives = 102/213 (47%), Gaps = 38/213 (17%) Query: 43 RIKVLVIHYTA-DDFDSSLATLTD--KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWH 99 R ++V+HYTA +D D + L + QVSSHY+V V +W LV E + AWH Sbjct: 30 RPSLIVLHYTAMNDADGACRWLCNPESQVSSHYVVTEVGA-------VWSLVEEADRAWH 82 Query: 100 AGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIK 159 AG W G +N SIGIE+ N G F AQ+ A+ L I+ R+ I Sbjct: 83 AGAGTWGGLDDINSRSIGIEISNAGTHG---------FAAAQMDAVEALVAGIMDRWDIP 133 Query: 160 PENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLL 219 E V+ H+D AP RK DPG F W++LA G+ W + Q+V+ D Sbjct: 134 AEGVIGHSDFAPGRKIDPGGRFDWRRLALGGLAVWSEGQQVD-----------PDWDGFR 182 Query: 220 ELLARYGYDVKPDMTPREQRRVIMA-FQMHFRP 251 R+GY P Q V++A +M FRP Sbjct: 183 AAAVRFGY-------PVAQDDVLLATMRMRFRP 208 >UniRef50_C2G1S0 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Sphingobacterium spiritivorum RepID=C2G1S0_9SPHI Length = 297 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 76/219 (34%), Positives = 106/219 (48%), Gaps = 41/219 (18%) Query: 47 LVIHYTA-DDFDSSLATLT--DKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGIS 103 ++IH+TA D +L T T +VS+HYL+ K ++QL+ + WHAG S Sbjct: 99 VIIHHTAQDSLKQTLRTFTLEHTKVSAHYLI-------GKKGEVYQLLNDYLRGWHAGAS 151 Query: 104 AWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENV 163 W T +N S+GIEL+N G + PF QI AL+ L + Y I N Sbjct: 152 KWGSVTDMNSVSLGIELDNNGRE---------PFSDVQINALLTLLDTLKTNYDIPTANF 202 Query: 164 VAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLA 223 + H DIAP RK+DP FPW++LA++G G W D R TP + + ++ L Sbjct: 203 IGHGDIAPTRKNDPSIFFPWKKLAERGFGLWYDE---------RTLMTPPEYFNPVDALK 253 Query: 224 RYGYDVKPDMTPREQRRVIMAFQMHF-----RP--TLYN 255 GYD R I+AF+ F RP TLY+ Sbjct: 254 IIGYDT------RNLSAAIVAFKRKFIVNDLRPELTLYD 286 >UniRef50_C6XXC7 N-acetylmuramoyl-L-alanine amidase family 2 n=3 Tax=Sphingobacteriaceae RepID=C6XXC7_PEDHD Length = 276 Score = 106 bits (264), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 73/209 (34%), Positives = 108/209 (51%), Gaps = 36/209 (17%) Query: 47 LVIHYTADDFDSSLA---TLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGIS 103 +V+H+TA D + T+T QVSSHY++ +GK ++Q+V + A HAG+S Sbjct: 79 VVLHHTAQDSSAQTLKTFTITRTQVSSHYVIGR-----DGK--VFQMVNDYLRANHAGVS 131 Query: 104 AWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENV 163 W LN +SIGIE++N G + P+ QI++LI + + + RY I N Sbjct: 132 RWGNEMDLNSSSIGIEIDNNGKE---------PYSEVQIKSLITVLRALKKRYGIPTANF 182 Query: 164 VAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLA 223 + HADIAP RK+DP FPW+++A +G G W D V P D + L ++ Sbjct: 183 IGHADIAPGRKNDPRN-FPWKRMAAEGFGFWYDDVLV-------MPPDDFDAVAALRII- 233 Query: 224 RYGYDVKPDMTPREQRRVIMAFQMHFRPT 252 GY+VK I AF++HF T Sbjct: 234 --GYNVK------NLNAAIEAFKIHFVQT 254 >UniRef50_A5UR54 N-acetylmuramoyl-L-alanine amidase, family 2 n=2 Tax=Roseiflexus RepID=A5UR54_ROSS1 Length = 419 Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 72/188 (38%), Positives = 104/188 (55%), Gaps = 26/188 (13%) Query: 44 IKVLVIHYTADDFDSSLATLTD--KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAG 101 I ++VIH TA S+LA LT+ +VS+HYL+ + +I++LVP++ AWHAG Sbjct: 22 ISMIVIHATAGTVRSALAWLTNPASRVSAHYLI-------DKAGQIYRLVPDEYAAWHAG 74 Query: 102 ISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPE 161 +AWRG T +ND S+GIELEN + P+ Q+++L+ L +D +A+Y I P+ Sbjct: 75 RAAWRGETAINDISLGIELENANNGRD-------PYPATQMESLVQLTRDKVAQYRIAPD 127 Query: 162 NVVAHADIA-PQ-RKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLL 219 VV H DIA P+ RK DP FPW +Q DA + P PV A+L Sbjct: 128 MVVRHLDIAIPRGRKSDPAG-FPWNDFLRQVFAEPIDALPEH-------PIPPVRYATLS 179 Query: 220 ELLARYGY 227 ++L Y Sbjct: 180 QMLLHEAY 187 >UniRef50_Q0F4W8 N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0F4W8_9RHOB Length = 238 Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 61/155 (39%), Positives = 91/155 (58%), Gaps = 18/155 (11%) Query: 46 VLVIHYTA-DDFDSSLATLTD--KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGI 102 ++V+HYTA ++ L+D +VS+HYL+ + ++ QLV EQ+ AWHAG Sbjct: 26 MIVLHYTAMKSSKDAIQRLSDPKSEVSAHYLI-------DEAGKVTQLVDEQKRAWHAGQ 78 Query: 103 SAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIAR-YHIKPE 161 W +N SIGIEL+ + SA F+ QI +L L DI+ R I+PE Sbjct: 79 GCWGEINDINSYSIGIELD---YCPSAKCN----FDERQISSLEKLLFDILKRRSEIRPE 131 Query: 162 NVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPD 196 ++AH+D+AP RK DPG FPW++L+Q+G+ WP+ Sbjct: 132 FIIAHSDMAPGRKFDPGMYFPWKKLSQKGLSIWPE 166 >UniRef50_Q3BNF4 N-acetylmuramoyl-L-alanine amidase n=14 Tax=Xanthomonadaceae RepID=Q3BNF4_XANC5 Length = 268 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 64/157 (40%), Positives = 86/157 (54%), Gaps = 21/157 (13%) Query: 43 RIKVLVIHYT-ADDFDSSLATLTDK----QVSSHYLVPAVPPRYNGKPRIWQLVPEQELA 97 R ++V+H+T SL+TL + +VS+HYL+ RY QLV + + A Sbjct: 49 RPILIVLHFTDQQSVRQSLSTLRGRNSGGRVSAHYLIGEDGQRY-------QLVSDGQRA 101 Query: 98 WHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYH 157 WH G W T +N SIGIEL+N G + PF PAQI +L+ L D+ R Sbjct: 102 WHGGAGRWGTITDINSASIGIELDNDGSE---------PFAPAQIDSLLVLLDDLCQRLR 152 Query: 158 IKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAW 194 I +V H D+AP RK+DPGPLFPW++LA G G W Sbjct: 153 IPRTQIVGHEDVAPTRKNDPGPLFPWKRLADAGFGRW 189 >UniRef50_B8GD95 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=3 Tax=Chloroflexus RepID=B8GD95_CHLAD Length = 641 Score = 97.1 bits (240), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 62/175 (35%), Positives = 91/175 (52%), Gaps = 29/175 (16%) Query: 29 YQLD----TRRQAQAAYP-RIKVLVIHYTADDFDSSLATLTD-----KQVSSHYLVPAVP 78 YQ++ TR Q P RI+++V+H TA + L ++VS HY + Sbjct: 2 YQIEWVGMTRNNFQPGSPDRIRMIVLHATAGSYPGDFKWLRQGGAPGREVSVHYYI---- 57 Query: 79 PRYNGKPRIWQLVPEQELAWHAGISAW----RGATRLNDTSIGIELENRGWQKSAGVKYF 134 + +I+QLV + ++AWHAG+S W R N+ S+GIELENR + Sbjct: 58 ---TKRGQIFQLVADHDIAWHAGVSRWEVDGRTVYGCNEVSLGIELENRNDGRD------ 108 Query: 135 APFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQ 189 P+ P Q A + L ++++ +YHI P VV H DI+P RK DP FPWQQ + Sbjct: 109 -PYPPEQYAAALWLVRELVQKYHIPPNQVVRHLDISPGRKTDPAG-FPWQQFLDE 161 >UniRef50_A3VV46 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VV46_9PROT Length = 238 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 62/158 (39%), Positives = 85/158 (53%), Gaps = 21/158 (13%) Query: 44 IKVLVIHYTA-DDFDSSLATLTDKQ--VSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHA 100 I ++V+HYT + +L L D + VSSHY + RI +LV E++ A HA Sbjct: 21 ITLVVLHYTGMPSAEEALDRLRDPEAGVSSHYFI-------EQDGRIVRLVDEKDRAHHA 73 Query: 101 GISAWRGATRLNDTSIGIELENRG--WQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHI 158 G+ AW +N SIGIE+ N+G W + F QI ALI L +I R+ + Sbjct: 74 GLGAWGPVRDVNSASIGIEIVNKGHLWG-------YEDFPDLQIDALIGLMTEIYRRHRL 126 Query: 159 KPENVVAHADIAPQRKDDPGPLFPWQQLA--QQGIGAW 194 P +AH+D+AP RKDDPG FPW +LA + IG W Sbjct: 127 GPLAAIAHSDLAPARKDDPGERFPWDRLAASRLAIGQW 164 >UniRef50_C7RNH8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=55 Tax=Proteobacteria RepID=C7RNH8_9PROT Length = 195 Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 56/131 (42%), Positives = 75/131 (57%), Gaps = 18/131 (13%) Query: 60 LATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIE 119 A + +VS+H+LV R +G+ + Q V +E AWHAG+SAW+G ND S+GIE Sbjct: 73 FAQIIGLRVSAHFLV-----RRDGE--LIQFVSCRERAWHAGLSAWKGRQGCNDFSLGIE 125 Query: 120 LENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGP 179 LE G +S PFE AQ L+ L + A Y I + VV H+DI+P RK DPGP Sbjct: 126 LE--GCDES-------PFEDAQYSCLLALVGRLCAGYPI--DAVVGHSDISPGRKTDPGP 174 Query: 180 LFPWQQLAQQG 190 F W++L G Sbjct: 175 CFDWRRLGSIG 185 >UniRef50_A8PNB6 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=Rickettsiella grylli RepID=A8PNB6_9COXI Length = 406 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 48/119 (40%), Positives = 67/119 (56%), Gaps = 2/119 (1%) Query: 156 YHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDT 215 Y I P+ ++ H+D+AP RK DPGP W++LA++ IGAWPD V +D Sbjct: 243 YQIPPQFILGHSDVAPGRKIDPGPRL-WKKLAERNIGAWPDEAEVCAIEQAITLEHGIDY 301 Query: 216 ASLLELLARYGYDVKPDMTPREQ-RRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKY 273 + + L YGYD+ EQ + VI +FQMHF P Y+G T ++ EALL+KY Sbjct: 302 KWIQDALGHYGYDINSTGQFDEQTQNVIRSFQMHFEPENYSGTPSVRTISLLEALLKKY 360 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 5/108 (4%) Query: 43 RIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKP-RIWQLVPEQELAWHAG 101 R + +V+HYTA D SL TLT +S+H+LVP P + + + ++LV + AWHAG Sbjct: 16 RQRFIVLHYTAFDEKDSLETLTRGGLSAHFLVPKQPFKVDEESYDYYKLVDINDRAWHAG 75 Query: 102 ISAWRGATRLNDTSIGIELENRGW---QKSAGVKYFAPFEPAQIQALI 146 S ++G LND SIGIE+ N G+ Q S + + E AQ++ I Sbjct: 76 CSHFKGRESLNDNSIGIEIVNYGFGLVQDSGEIVFTYQIE-AQLKTFI 122 >UniRef50_D0RN01 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RN01_9RICK Length = 159 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 65/152 (42%), Positives = 84/152 (55%), Gaps = 19/152 (12%) Query: 43 RIKVLVIHYTA-DDFDSSLATLTDK--QVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWH 99 RIK ++IHYT D S++ L K +VS HYL+ GK ++Q+V + ++AWH Sbjct: 20 RIKYVIIHYTGMRDQKSAIKRLQSKVAKVSCHYLISR-----GGK--VYQMVQDLDVAWH 72 Query: 100 AGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIK 159 AG S W LN SIGIEL N+G F F QI ALI + K + +Y IK Sbjct: 73 AGKSKWGKDINLNSKSIGIELVNKG---------FESFPNKQILALIKILKILKKKYKIK 123 Query: 160 PENVVAHADIAPQRKDDPGPLFPWQQLAQQGI 191 P V+ H DI+P RK DPGP FPW+ L I Sbjct: 124 PSYVLGHEDISPGRKTDPGPKFPWKILYNHKI 155 >UniRef50_A1TKH5 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=Acidovorax RepID=A1TKH5_ACIAC Length = 209 Score = 87.0 bits (214), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 58/144 (40%), Positives = 76/144 (52%), Gaps = 20/144 (13%) Query: 45 KVLVIHYTADDFDSS--LATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGI 102 +V + A D+D+ A + QVS+H+ + R+WQ V + AWHAG Sbjct: 66 EVQRLFTNALDWDAHPYYAGIRGLQVSAHFFI-------ERGGRLWQFVDCGDRAWHAGP 118 Query: 103 SAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPEN 162 SA+RG ND SIGIELE G + FEPAQ QAL L +DI RY + + Sbjct: 119 SAYRGRDNCNDDSIGIELE--GLEGDT-------FEPAQYQALATLCRDIAQRYPVA--H 167 Query: 163 VVAHADIAPQRKDDPGPLFPWQQL 186 V H +AP RK DPGP F W++L Sbjct: 168 VAGHEHVAPGRKRDPGPGFDWREL 191 >UniRef50_A4W6L1 N-acetylmuramoyl-L-alanine amidase, family 2 n=36 Tax=Proteobacteria RepID=A4W6L1_ENT38 Length = 187 Score = 86.7 bits (213), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 50/127 (39%), Positives = 69/127 (54%), Gaps = 16/127 (12%) Query: 60 LATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIE 119 A + +VS+H L+ R +G+ I Q VP + AWHAG+S++ G + ND SIGIE Sbjct: 64 FAEIAHLRVSAHCLI-----RRDGE--IVQYVPFDKRAWHAGVSSYCGREKCNDFSIGIE 116 Query: 120 LENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGP 179 LE P+ AQ QAL + + +IA Y +N+ H+DIAP RK DPGP Sbjct: 117 LEGTD---------TTPYTDAQYQALCAVTRKLIACYPTISDNITGHSDIAPVRKTDPGP 167 Query: 180 LFPWQQL 186 F W + Sbjct: 168 AFDWSRF 174 >UniRef50_B1XX10 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=5 Tax=Proteobacteria RepID=B1XX10_LEPCP Length = 209 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 73/134 (54%), Gaps = 18/134 (13%) Query: 60 LATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIE 119 ATL QVS+H+++ R +G+ + Q V +E AWHAG S+WRG + ND S+GIE Sbjct: 74 FATLAGLQVSAHFVI-----RRDGE--LLQFVDVRERAWHAGASSWRGRSNCNDHSLGIE 126 Query: 120 LENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGP 179 LE Q+ FEPAQ + L L +D AR VV H IAP RK DPG Sbjct: 127 LEGLEGQR---------FEPAQYRVLAGLLRD--ARTAWPLREVVGHEHIAPGRKHDPGA 175 Query: 180 LFPWQQLAQQGIGA 193 F W +LA+ GA Sbjct: 176 GFDWCRLARHLRGA 189 >UniRef50_D0J795 N-acetylmuramyl-L-alanine amidase, negative n=9 Tax=Proteobacteria RepID=D0J795_COMTE Length = 209 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 53/123 (43%), Positives = 66/123 (53%), Gaps = 18/123 (14%) Query: 67 QVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQ 126 +VSSH+ + + IWQ V + AWHAG+S WRG R ND SIGIELE Sbjct: 83 EVSSHFFI-------TRQGEIWQFVSCDDRAWHAGVSQWRGRERCNDDSIGIELE----- 130 Query: 127 KSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQL 186 G++ + FE Q QAL L I A Y ++ + H IAP RK DPGP F WQ+L Sbjct: 131 ---GLEGLS-FEAPQYQALQQLCMAIAAHYPVR--YIAGHEHIAPGRKQDPGPGFDWQRL 184 Query: 187 AQQ 189 Q Sbjct: 185 QLQ 187 >UniRef50_B2JH28 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=51 Tax=Proteobacteria RepID=B2JH28_BURP8 Length = 212 Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 78/149 (52%), Gaps = 20/149 (13%) Query: 61 ATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIEL 120 A L D +VS+H+++ R +G + Q V E AWHAG S + G R ND SIGIEL Sbjct: 81 AHLRDVRVSAHFVI-----RRDGA--LEQYVSCDERAWHAGASNFFGRERCNDFSIGIEL 133 Query: 121 ENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPL 180 E +PFE AQ L PL + + A Y I +++ H+DIAP RK DPGP Sbjct: 134 EGSDA---------SPFERAQYATLAPLVRSLAAHYEI--DSLAGHSDIAPGRKTDPGPH 182 Query: 181 FPWQQLAQQGIGAWPDAQRVNFYLAGRAP 209 F W +L ++ A PD + + R P Sbjct: 183 FEWPRLQRE--TALPDQYFPYLHPSSRKP 209 >UniRef50_UPI0000D5333F negative regulator of AmpC, AmpD n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D5333F Length = 196 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 62/185 (33%), Positives = 87/185 (47%), Gaps = 47/185 (25%) Query: 32 DTRRQAQAAYPRIKVLVIH------------YTADDFDSSLAT--------LTDKQVSSH 71 D RR Q +++VIH Y D F +SL T ++ +VSSH Sbjct: 34 DDRRDGQDP----EIIVIHGISLPPGEYGGSYVCDLFLNSLDTSVCEYFKEISTLKVSSH 89 Query: 72 YLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGV 131 + N R+ Q VP AWHAG SA+RG N SIGIELE + + + + Sbjct: 90 LFI-------NRLGRVMQFVPFNSRAWHAGESAYRGREMCNHFSIGIELEGQDNDEYSDI 142 Query: 132 KYFAPFEPAQIQALIPLAKDIIARYHIKP----ENVVAHADIAPQRKDDPGPLFPWQQLA 187 +Y + LAK I A + P ++V H+DIAP+RK DPGP F W++L Sbjct: 143 QY------------VILAKIINALFEFYPRISARDIVGHSDIAPKRKTDPGPAFNWKRLY 190 Query: 188 QQGIG 192 ++ G Sbjct: 191 REISG 195 >UniRef50_B4RX52 N-acetylmuramoyl-L-alanine amidase, putative n=2 Tax=Alteromonas macleodii RepID=B4RX52_ALTMD Length = 315 Score = 84.0 bits (206), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 60/174 (34%), Positives = 84/174 (48%), Gaps = 39/174 (22%) Query: 46 VLVIHYTA-DDFDSSLATLTDKQ--VSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGI 102 +VIH+TA DSS+ LT+ + VS+H+ + NG I Q++P ++ WHAG Sbjct: 43 TIVIHFTAGSSLDSSVNVLTNAESGVSAHFALGR-----NGD--IVQMLPTNKIGWHAGK 95 Query: 103 SAWRGATRLNDTSIGIELENRGWQKSAG---------------------------VKYFA 135 S ++G + LN SIGIEL+N G K G + Y+ Sbjct: 96 SHYKGRSGLNRYSIGIELDNAGQLKPRGDGTYESWFGNVYRESEVIAAQHPNQSVLGYWH 155 Query: 136 PFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQ 189 + QI + I L K + Y I VV H +IAP RK DPGP FP Q+ +Q Sbjct: 156 KYTDIQIASTISLCKVLCEHYPISV--VVGHDEIAPSRKVDPGPAFPMHQIREQ 207 >UniRef50_Q4ZY97 N-acetylmuramoyl-L-alanine amidase, family 2 n=14 Tax=Gammaproteobacteria RepID=Q4ZY97_PSEU2 Length = 182 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 47/125 (37%), Positives = 68/125 (54%), Gaps = 17/125 (13%) Query: 63 LTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELEN 122 + D +VS+H+L+ +G+ + Q V + AWHAG+S+++G ND S+GIELE Sbjct: 68 IADLRVSAHFLI-----ERDGE--VIQFVSCLDRAWHAGVSSFQGREGCNDFSVGIELEG 120 Query: 123 RGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYH-IKPENVVAHADIAPQRKDDPGPLF 181 Q PF AQ ALI L + + + I PE + H+D+AP RK DPGP F Sbjct: 121 TDDQ---------PFTDAQYDALIDLTRQLRQAFEAITPERICGHSDVAPGRKTDPGPCF 171 Query: 182 PWQQL 186 W + Sbjct: 172 DWARF 176 >UniRef50_B5JVS6 Negative regulator of AmpC, AmpD n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JVS6_9GAMM Length = 206 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 51/124 (41%), Positives = 69/124 (55%), Gaps = 17/124 (13%) Query: 67 QVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQ 126 +VS+H LV R +G+ + Q VP + AWHAG S++ G + ND +IGIELE Q Sbjct: 93 KVSAHALV-----RRDGE--VVQFVPFHKRAWHAGQSSYCGRDKCNDFAIGIELEGSDDQ 145 Query: 127 KSAGVKYFAPFEPAQIQALIPLAKDIIARY-HIKPENVVAHADIAPQRKDDPGPLFPWQQ 185 PFE Q +AL+ L +I Y + E++V H+DIAP RK DPGP F W Sbjct: 146 ---------PFEAEQYRALVALTAQLIQTYPQLSAEHIVGHSDIAPGRKTDPGPHFKWAD 196 Query: 186 LAQQ 189 +Q Sbjct: 197 YRKQ 200 >UniRef50_P82974 1,6-anhydro-N-acetylmuramyl-L-alanine amidase ampD n=192 Tax=Proteobacteria RepID=AMPD_CITFR Length = 187 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 50/127 (39%), Positives = 68/127 (53%), Gaps = 16/127 (12%) Query: 60 LATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIE 119 A + +VS+H L+ R +G+ I Q VP + AWHAG+S+++G R ND SIGIE Sbjct: 64 FAGIAHLRVSAHCLI-----RRDGE--IVQYVPFDKRAWHAGVSSYQGRERCNDFSIGIE 116 Query: 120 LENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGP 179 LE G A + AQ Q L + +I RY N+ H +IAP+RK DPGP Sbjct: 117 LE--------GTDTLA-YTDAQYQQLAAVTNALITRYPAIANNMTGHCNIAPERKTDPGP 167 Query: 180 LFPWQQL 186 F W + Sbjct: 168 SFDWARF 174 >UniRef50_Q0AC58 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=7 Tax=Gammaproteobacteria RepID=Q0AC58_ALHEH Length = 186 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 57/146 (39%), Positives = 74/146 (50%), Gaps = 17/146 (11%) Query: 42 PRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAG 101 P I L + D A + +VS H L+ R +G + Q VP AWHAG Sbjct: 51 PWIDRLFTNRLPADAHPYFARVHRLRVSCHLLI-----RRDGA--LTQYVPLHRRAWHAG 103 Query: 102 ISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARY-HIKP 160 S G R ND +IGIELE G ++ P+ AQ Q L PL + ++A + I P Sbjct: 104 QSRLAGRERCNDFAIGIELE--GTDET-------PYTEAQYQVLGPLCRTLMAAFPGITP 154 Query: 161 ENVVAHADIAPQRKDDPGPLFPWQQL 186 E VV H+D+AP RK DPGP F W +L Sbjct: 155 ERVVGHSDVAPGRKTDPGPAFDWARL 180 >UniRef50_B3SF77 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3SF77_TRIAD Length = 232 Score = 79.7 bits (195), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 69/234 (29%), Positives = 107/234 (45%), Gaps = 29/234 (12%) Query: 59 SLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGI 118 ++ T +DK VSSH+L+ K I QLVP + AWHAG S W G +N SIGI Sbjct: 8 NILTKSDK-VSSHFLISE-------KGDIHQLVPLEFKAWHAGESFWSGKNDINQYSIGI 59 Query: 119 ELENRGWQ-----KSAGVKYFAPFEPAQIQALIPLAKDIIARY-HIKPENVVAHADIAPQ 172 E+ N+G + V F AL L ++ Y I+ +N++ H+DI + Sbjct: 60 EIVNKGMKLKFLNNKVQVLNINTFSNNIYFALAKLICELKKMYPKIQDKNIIGHSDITAK 119 Query: 173 --RKDDPGPLFPWQQLAQQGIGAWP-----DAQRVNFYLAGRAPHTPVDTASLLELLARY 225 RK DPG F W+ L G G + D ++ F L + + + L + Sbjct: 120 NLRKIDPGIAFDWKFLNILGHGIYHEIEKRDNNKIIFKLGDKGQNIELLQKK----LKKL 175 Query: 226 GYDVKPD-MTPREQRRVIMAFQMHF--RPTLYNGEADAETQAI-AEALLEKYGQ 275 GY++ + + + VI AF +H+ + N + + I +E +LEK Q Sbjct: 176 GYEINYNGLFDKHLANVIFAFNLHYLQHLNITNSQINYGIWDINSEKVLEKITQ 229 >UniRef50_A4G8Q1 N-acetylmuramoyl-L-alanine amidase n=4 Tax=Burkholderiales RepID=A4G8Q1_HERAR Length = 185 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/137 (38%), Positives = 71/137 (51%), Gaps = 21/137 (15%) Query: 49 IHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGA 108 + Y AD + L L +VS+H+L+ R +G + Q V ++ AWHAG S++ G Sbjct: 31 LDYAADPYFEQLKLL---RVSAHFLI-----RRDGN--VMQFVSARDRAWHAGASSFCGQ 80 Query: 109 TRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHAD 168 R ND SIGIELE +Q PFE AQ AL L + Y ++ +V H Sbjct: 81 ERCNDFSIGIELEGTDFQ---------PFEEAQYIALASLTVALKQAYPLR--HVSGHEQ 129 Query: 169 IAPQRKDDPGPLFPWQQ 185 IAP RK DPGP F W + Sbjct: 130 IAPGRKTDPGPFFNWTE 146 >UniRef50_C9R6I7 Protein AmpD n=1 Tax=Aggregatibacter actinomycetemcomitans D11S-1 RepID=C9R6I7_AGGAD Length = 217 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 60/191 (31%), Positives = 83/191 (43%), Gaps = 43/191 (22%) Query: 26 KEGYQLDTRRQAQAAYPR------IKVLVIHYTA-----------DDFDSS--------- 59 K+G+ LD RR + + I +L+IHY + DDF Sbjct: 42 KDGWLLDERRVLSPHFDQRPDPQDISLLIIHYISLPPEQFGGGYIDDFFQGKLDAQAHPY 101 Query: 60 LATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIE 119 ++ +VS+H L+ RI Q V + AWHAG+S + G + ND +IGIE Sbjct: 102 FQEISLLRVSAHCLIERTG-------RITQYVNFNDRAWHAGLSYFEGREKCNDFAIGIE 154 Query: 120 LENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARY-HIKPENVVAHADIAPQRKDDPG 178 LE Q PF Q L L + I+ Y I E +V H D++P RK DPG Sbjct: 155 LEGSNEQ---------PFTTQQYDTLQRLTRQIMQAYPRITKERIVGHCDVSPGRKIDPG 205 Query: 179 PLFPWQQLAQQ 189 F WQ+ Q Sbjct: 206 QYFDWQRYLQH 216 >UniRef50_B8GT21 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GT21_THISH Length = 275 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/182 (34%), Positives = 91/182 (50%), Gaps = 38/182 (20%) Query: 45 KVLVIHYTAD-DFDSSLATLTDKQV--SSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAG 101 ++LVIH+TA +SS+ + Q S+H ++ NG I Q+VP +AWHAG Sbjct: 31 RLLVIHFTAGASAESSINWFLNPQAKASAHLVID-----RNG--HITQMVPFDTVAWHAG 83 Query: 102 ISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPF------------------EPA--- 140 S W + LN SIGIEL+N G + G ++ + F EP+ Sbjct: 84 ASRWNDLSGLNHHSIGIELDNAGRLQPHGDQWRSWFGRDYHDDEVLVARHKHETEPSGWQ 143 Query: 141 -----QIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWP 195 QI+ + +A+ + ARY + E++V H DIAP RK DPGP FP L + +G Sbjct: 144 LYTREQIETTLEVAQCLFARYGL--EDIVGHEDIAPGRKSDPGPAFPMGALRARLLGRQE 201 Query: 196 DA 197 D+ Sbjct: 202 DS 203 >UniRef50_Q1DDM5 N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DDM5_MYXXD Length = 203 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/155 (36%), Positives = 86/155 (55%), Gaps = 21/155 (13%) Query: 43 RIKVLVIHYTADDF---DSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWH 99 +I +V+H+TA + D S +VS+HY+V +GK I+QLV + + AWH Sbjct: 63 KIDTIVMHHTATNNGAGDLSWMRNPQSKVSAHYMVD-----RDGK--IYQLVGDDKRAWH 115 Query: 100 AGISAWRGA-TRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHI 158 AG G + +N+ SIGIE+ N G K+ PF AQ ++L L + +++I Sbjct: 116 AGKGELHGVPSDINNRSIGIEIVNDGSGKT-------PFTEAQYKSLTQLTGYLKQQHNI 168 Query: 159 KPENVVAHADIA--PQRKDDPGPLFPWQQLAQQGI 191 +N+V HAD+A RK+DP P F W +L ++GI Sbjct: 169 PMKNIVGHADVAVPKGRKNDPAPNFDWNRL-RKGI 202 >UniRef50_P13016 1,6-anhydro-N-acetylmuramyl-L-alanine amidase ampD n=65 Tax=Gammaproteobacteria RepID=AMPD_ECOLI Length = 183 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/127 (39%), Positives = 67/127 (52%), Gaps = 16/127 (12%) Query: 60 LATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIE 119 A + +VS+H L+ R +G+ I Q VP + AWHAG+S ++G R ND SIGIE Sbjct: 64 FAEIAHLRVSAHCLI-----RRDGE--IVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIE 116 Query: 120 LENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGP 179 LE G A + AQ Q L + + +I Y +N+ H DIAP RK DPGP Sbjct: 117 LE--------GTDTLA-YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGP 167 Query: 180 LFPWQQL 186 F W + Sbjct: 168 AFDWARF 174 >UniRef50_A6GR52 Putative anhydro-N-acetylmuramyl-tripeptide amidase, AmpD (Negative regulator of AmpC) n=1 Tax=Limnobacter sp. MED105 RepID=A6GR52_9BURK Length = 187 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 66/129 (51%), Gaps = 18/129 (13%) Query: 58 SSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIG 117 +S L VSSH+L+ + + Q V ++ AWHAGISA + N SIG Sbjct: 64 ASFGELIGLHVSSHFLI-------DRDGSVTQFVSCEKRAWHAGISAAMDRSNFNHFSIG 116 Query: 118 IELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDP 177 IEL + PFE Q +L LA ++ ARY +K +AH++IAP RK DP Sbjct: 117 IELLG---------DIYTPFEQTQYASLKRLALELQARYPLK--YAMAHSEIAPTRKTDP 165 Query: 178 GPLFPWQQL 186 GP F W+ L Sbjct: 166 GPFFDWKGL 174 >UniRef50_C6APP4 Protein AmpD n=8 Tax=Gammaproteobacteria RepID=C6APP4_AGGAN Length = 184 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/161 (33%), Positives = 73/161 (45%), Gaps = 37/161 (22%) Query: 44 IKVLVIHYTA-----------DDFDSS---------LATLTDKQVSSHYLVPAVPPRYNG 83 I +L+IHY + DDF A ++ +VS+H L+ N Sbjct: 33 ISLLIIHYISLPPEQFGGSYIDDFFQGKLAPNRHPYFAEISTLRVSAHCLI-------NR 85 Query: 84 KPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQ 143 I Q V + AWHAGIS + G + ND +IGIELE Q PF Q Sbjct: 86 AGEITQYVNFNDRAWHAGISCFEGREKCNDFAIGIELEGSNEQ---------PFTTQQYV 136 Query: 144 ALIPLAKDIIARY-HIKPENVVAHADIAPQRKDDPGPLFPW 183 +L L ++I+ Y I E +V H D++P RK DPG F W Sbjct: 137 SLQRLTQEIMRAYPLITKERIVGHCDVSPGRKIDPGQYFDW 177 >UniRef50_Q46X31 N-acetylmuramoyl-L-alanine amidase, family 2 n=13 Tax=Proteobacteria RepID=Q46X31_RALEJ Length = 203 Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/128 (39%), Positives = 67/128 (52%), Gaps = 18/128 (14%) Query: 60 LATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIE 119 AT+ QVS+H+LV R +G+ + Q VP + AWHAG S + G +R ND S+GIE Sbjct: 77 FATIHQVQVSAHFLV-----RRDGE--LVQFVPCTKRAWHAGQSDFFGRSRCNDFSVGIE 129 Query: 120 LENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGP 179 +E G PF AQ L K + A ++ V H+DIAP RK DPGP Sbjct: 130 IE--------GTDDL-PFTAAQYTTTSTLVKALRATLPVR--AVAGHSDIAPGRKTDPGP 178 Query: 180 LFPWQQLA 187 F W + A Sbjct: 179 HFDWDRFA 186 >UniRef50_A1K6E1 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Azoarcus sp. BH72 RepID=A1K6E1_AZOSB Length = 286 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 58/190 (30%), Positives = 85/190 (44%), Gaps = 43/190 (22%) Query: 45 KVLVIHYTADDF-DSSLATLT---DKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHA 100 K +V HYTA D+S A + +++VS+H LV + I Q V AWHA Sbjct: 35 KFVVFHYTACSHADASAAFMNASGNRRVSAHLLV-------DSDGSITQFVDFNLRAWHA 87 Query: 101 GISAWRGATRLNDTSIGIELENRGW--QKSAGV--------------------------- 131 G+S W LN SIG+E+ N G+ + SAG Sbjct: 88 GVSEWEDYRDLNSHSIGVEIVNYGYLLKNSAGGFTLSNGRSSPFTPAEVVEARHRKEAVR 147 Query: 132 -KYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQG 190 +Y+ F P Q++ L + + Y + +V+ H DIAP RK DPGP FP ++ + Sbjct: 148 HQYWHAFTPEQLETCEALVEVLFDAYALS--DVLGHDDIAPTRKVDPGPAFPMDRIKSRA 205 Query: 191 IGAWPDAQRV 200 +G D + V Sbjct: 206 VGRDSDIEMV 215 >UniRef50_A4SVB0 N-acetylmuramoyl-L-alanine amidase, family 2 n=4 Tax=Proteobacteria RepID=A4SVB0_POLSQ Length = 225 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 52/148 (35%), Positives = 72/148 (48%), Gaps = 21/148 (14%) Query: 60 LATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIE 119 A + ++VSSH+L+ R+ Q V + AWHAG+S++ G + ND SIGIE Sbjct: 99 FAEIEGQKVSSHFLI-------TRSGRLIQFVSTKHKAWHAGLSSFLGREKCNDFSIGIE 151 Query: 120 LENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGP 179 LE G PFE Q + L + A Y H+DIAP+RK DPG Sbjct: 152 LEGDGE---------TPFEEIQYKVLSETVGKLSATY--PSLQFAGHSDIAPERKTDPGI 200 Query: 180 LFPWQQLAQQGIGAWPDAQRVNFYLAGR 207 F W++ Q+ G D ++ F LA R Sbjct: 201 SFDWKRF-QKETGLSLD--KLPFGLASR 225 >UniRef50_Q093H8 Negative regulator of beta-lactamase expression n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q093H8_STIAU Length = 280 Score = 73.9 bits (180), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 54/149 (36%), Positives = 81/149 (54%), Gaps = 20/149 (13%) Query: 44 IKVLVIHYTADDFDSS-LATLTD--KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHA 100 I +V+H+TA + + LA + + +VS+HY+V +GK I+QLV + + AWHA Sbjct: 141 IDTIVLHHTASNNGAGDLAHMRNPASEVSAHYMV-----DRDGK--IYQLVNDSKRAWHA 193 Query: 101 GISAWRGA-TRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIK 159 G S G T +N SIGIE+ N G K+A F AQ ++L L + + + Sbjct: 194 GKSELHGVPTDVNSRSIGIEIVNDGSGKTA-------FTEAQYKSLTQLVGYLKQEHGVP 246 Query: 160 PENVVAHADIA-PQ-RKDDPGPLFPWQQL 186 N+V H D+A P+ RK+DP F W +L Sbjct: 247 MNNIVGHKDVAVPKGRKNDPASNFDWNRL 275 >UniRef50_A4A5I4 Anhydro-N-acetylmuramyl-tripeptide amidase n=1 Tax=Congregibacter litoralis KT71 RepID=A4A5I4_9GAMM Length = 196 Score = 73.2 bits (178), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 47/145 (32%), Positives = 68/145 (46%), Gaps = 15/145 (10%) Query: 44 IKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGIS 103 ++ L + D S L +VS+H+ + N + + Q V + AWHAG+S Sbjct: 51 VEALFCNTLDCSRDPSFDELRGLEVSAHFFI-------NREGALTQFVSCHDRAWHAGVS 103 Query: 104 AWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENV 163 W ND SIGIELE +Q ++Y A + +LI + + P + Sbjct: 104 TWGSRVNCNDFSIGIELEGTDYQAYEDMQY------AMLSSLIGELRCRMPSLARGP--I 155 Query: 164 VAHADIAPQRKDDPGPLFPWQQLAQ 188 V H+DIAP RK DPG F W +L Q Sbjct: 156 VGHSDIAPGRKTDPGEAFDWNRLRQ 180 >UniRef50_Q65VN8 AmpD protein n=13 Tax=Gammaproteobacteria RepID=Q65VN8_MANSM Length = 190 Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 55/164 (33%), Positives = 73/164 (44%), Gaps = 39/164 (23%) Query: 44 IKVLVIHYTA------------DDFDSSLA--------TLTDKQVSSHYLVPAVPPRYNG 83 I +LVIHY + D F L T+ +VS+H L+ Sbjct: 35 ISLLVIHYISLPPEQFGGGYIEDFFQGKLNPETHPYFQTIYQIRVSAHCLI-------GR 87 Query: 84 KPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQ 143 R+ Q V + AWHAG S ++G + ND +IGIELE Q PF Q Q Sbjct: 88 DGRVTQFVSFNDRAWHAGESCFQGREKCNDYAIGIELEGSNEQ---------PFTEVQYQ 138 Query: 144 ALIPLAKDIIARYH--IKPENVVAHADIAPQRKDDPGPLFPWQQ 185 L L +II Y+ I + +V H D+AP RK DPG F W + Sbjct: 139 RLAELT-NIIRHYYPKITEDRIVGHCDVAPGRKIDPGQYFEWTK 181 >UniRef50_B3QXY2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QXY2_CHLT3 Length = 288 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/166 (33%), Positives = 77/166 (46%), Gaps = 38/166 (22%) Query: 46 VLVIHYTAD-DFDSSLATLT--DKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGI 102 +VIHYTA D SS+ TL D + S+H ++ NG+ I+QL P + WHAG Sbjct: 35 TIVIHYTAGRDARSSVQTLCSPDLKASAHLVIGR-----NGE--IYQLAPFDRITWHAGK 87 Query: 103 SAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPF------------------------- 137 S W + LN SIGIE++N G G +Y + F Sbjct: 88 SNWHERSGLNQFSIGIEIDNAGRLTKQGTEYLSWFGKSYAANEVFSGVHRHEQTLSFWHR 147 Query: 138 -EPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFP 182 AQI + + + + Y IK ++ H +I+P RK DPGP FP Sbjct: 148 YTEAQILLVEEICRLLRQVYDIK--EILGHEEISPGRKTDPGPAFP 191 >UniRef50_C5TMG7 Protein AmpD n=4 Tax=Neisseriaceae RepID=C5TMG7_NEIFL Length = 199 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 50/136 (36%), Positives = 67/136 (49%), Gaps = 21/136 (15%) Query: 56 FDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTS 115 F S + TL +VSSH+ + + K Q V ++A+HAG+S+++G + N S Sbjct: 80 FFSIIHTL---RVSSHFFI-------SRKGETVQFVSCDDMAYHAGVSSFQGREKCNAFS 129 Query: 116 IGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKD 175 IGIELE F PF AQ +L L I Y I+ V H DIAP RK Sbjct: 130 IGIELEGCD---------FEPFTEAQYTSLQALLTAISEHYPIQA--VTGHQDIAPDRKT 178 Query: 176 DPGPLFPWQQLAQQGI 191 DPG F W +L + G Sbjct: 179 DPGHFFDWPRLQKAGF 194 >UniRef50_B0VMP8 N-acetyl-anhydromuramyl-L-alanine amidase (Regulates ampC) n=25 Tax=Proteobacteria RepID=B0VMP8_ACIBS Length = 189 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 57/129 (44%), Gaps = 16/129 (12%) Query: 60 LATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIE 119 T+ QVS+H L+ + Q V + AWHAG S++ ND SIGIE Sbjct: 70 FQTIEGMQVSTHLLILRTG-------EVLQFVNFNDRAWHAGRSSYLAKIECNDYSIGIE 122 Query: 120 LENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGP 179 LE PFE Q + L + I Y ++ H+DIAP RK DPGP Sbjct: 123 LEGSD---------DLPFEDLQYEVLTDVVTAIRQAYPEIKNHIAGHSDIAPGRKTDPGP 173 Query: 180 LFPWQQLAQ 188 F WQ Q Sbjct: 174 YFKWQHFRQ 182 >UniRef50_B3R6P0 N-acetyl-anhydromuranmyl-L-alanine amidase n=3 Tax=Betaproteobacteria RepID=B3R6P0_CUPTR Length = 205 Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 48/129 (37%), Positives = 63/129 (48%), Gaps = 18/129 (13%) Query: 60 LATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIE 119 AT+ QVS+H+LV + Q VP + AWHAG S + G R ND SIGIE Sbjct: 79 FATIHQIQVSAHFLV-------TRSGELVQFVPCTQRAWHAGQSEFFGRARCNDFSIGIE 131 Query: 120 LENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGP 179 +E PF AQ L + + A Y + + + H+DIAP RK DPGP Sbjct: 132 IEGTDD---------VPFTAAQYNTTAALVRALRAAYPV--QAIAGHSDIAPGRKTDPGP 180 Query: 180 LFPWQQLAQ 188 F W + A+ Sbjct: 181 HFDWNRFAR 189 >UniRef50_A1AXT9 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=Proteobacteria RepID=A1AXT9_RUTMC Length = 174 Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 62/127 (48%), Gaps = 18/127 (14%) Query: 60 LATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIE 119 ++ D +VS+H L+ + NG I Q VP + AWHAG S ++G ND SIGIE Sbjct: 62 FKSIKDLKVSAHLLI-----KRNG--MIIQFVPFNQRAWHAGKSNYKGKHNCNDFSIGIE 114 Query: 120 LENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGP 179 L+ V+Y + +I L K H + H+DI+P RK DPGP Sbjct: 115 LQGDDNTSYELVQY------KVLNNVIDLLKS-----HYPISTIKGHSDISPIRKTDPGP 163 Query: 180 LFPWQQL 186 F W +L Sbjct: 164 YFKWSKL 170 >UniRef50_A8FVJ2 Negative regulator of beta-lactamase expression-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FVJ2_SHESH Length = 259 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 14/205 (6%) Query: 34 RRQAQAAYPRIKVLVIHYTAD-DFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVP 92 R + + + I +VIH TA ++ T +++ S+H+++P +G IW +V Sbjct: 62 RSRGRDVFESIDTIVIHATAGYATKHAVDTWKERKASAHWIIPDENEAEHGH-FIWAMVA 120 Query: 93 EQELAWHAG----ISAWRGATRLNDTSIGIELENRGWQKSAGVKYFA-PFEPAQIQALIP 147 E + A+H G S +ND S+G+EL N + V+YF P+ QI L Sbjct: 121 ESKAAYHVGNVDYASILGEGLNVNDRSLGVELVN-----TQNVQYFRDPYSQWQIDMLAR 175 Query: 148 LAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGR 207 + A+Y ++V++HA + P R+ DPG FPW+ + + +R Sbjct: 176 IVLYAWAKY-PNLKHVISHAKLDPARRSDPGENFPWEAFKHKVLSQSVLNERHPLVFETS 234 Query: 208 APHTPVDTASL-LELLARYGYDVKP 231 A DT SL L + R G+ +P Sbjct: 235 ASSVTSDTDSLNLAVTTRAGHCCEP 259 >UniRef50_A8FQB8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=22 Tax=Gammaproteobacteria RepID=A8FQB8_SHESH Length = 205 Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 66/134 (49%), Gaps = 17/134 (12%) Query: 57 DSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSI 116 D+S L +VS+H+L+ R +G+ + Q V + AWHAG+S++ ND +I Sbjct: 86 DASFIDLKGLEVSAHFLI-----RRDGE--LVQYVSCGDRAWHAGVSSYGSREGCNDFAI 138 Query: 117 GIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARY-HIKPENVVAHADIAPQRKD 175 GIELE G A + Q + L L + Y + + VV H DIAP RK Sbjct: 139 GIELE--------GTDTLA-YTEQQYRELKILTLALFDAYPMLNIDRVVGHCDIAPGRKT 189 Query: 176 DPGPLFPWQQLAQQ 189 DPG F WQ+ + Sbjct: 190 DPGESFDWQRFKKD 203 >UniRef50_A5WCS6 N-acetylmuramoyl-L-alanine amidase, family 2 n=3 Tax=Psychrobacter RepID=A5WCS6_PSYWF Length = 206 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 64/146 (43%), Gaps = 24/146 (16%) Query: 49 IHYTADDFDSSL--------ATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHA 100 +HY F ++L ++ +VS+H + +I QLV + AWHA Sbjct: 67 LHYVKALFTNTLDWDAHPYFKSIEGMEVSAHLFI-------ERSGQITQLVNFENRAWHA 119 Query: 101 GISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKP 160 G S++ G ND SIGIELE +Q F Q AL + I Y Sbjct: 120 GRSSYLGRPECNDYSIGIELEGSDFQA---------FTAEQYTALSSVIAAIYKAYPKTR 170 Query: 161 ENVVAHADIAPQRKDDPGPLFPWQQL 186 ++ H+DIAP RK DPG F W L Sbjct: 171 RHLTGHSDIAPGRKTDPGEYFEWDTL 196 >UniRef50_C8PWQ1 Protein AmpD n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PWQ1_9GAMM Length = 219 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 58/127 (45%), Gaps = 16/127 (12%) Query: 60 LATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIE 119 AT+ +QVS+H + I Q V AWHAG S++ G ND SIGIE Sbjct: 93 FATIYQQQVSAHLFIER-------DGSITQFVSFDARAWHAGKSSYLGVPNCNDYSIGIE 145 Query: 120 LENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGP 179 LE + + F+ Q QAL + I Y ++ H+DIA RK DPG Sbjct: 146 LEGDDYSE---------FDDRQYQALSGVIAAIYQAYPKTVNHLAGHSDIARGRKSDPGL 196 Query: 180 LFPWQQL 186 F W +L Sbjct: 197 YFDWVKL 203 >UniRef50_A0L5K2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=Proteobacteria RepID=A0L5K2_MAGSM Length = 183 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/136 (38%), Positives = 66/136 (48%), Gaps = 20/136 (14%) Query: 48 VIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRG 107 V+ AD + +A+L +V++H+L+ R G I Q VP + WHAG S W+G Sbjct: 49 VLDAQADPYFVGIASL---RVAAHFLIG----RDGG---ITQYVPLSKRGWHAGESVWQG 98 Query: 108 ATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHA 167 R ND SIG+ELE PF Q Q L L + + R E VV H Sbjct: 99 RPRCNDFSIGVELEG---------DEEHPFAAIQYQRLAQLTRTLQQRLPRLVE-VVGHQ 148 Query: 168 DIAPQRKDDPGPLFPW 183 DIAP RK DPG F W Sbjct: 149 DIAPGRKWDPGRQFDW 164 >UniRef50_A6T2C3 Negative regulator of beta-lactamase expression n=2 Tax=Oxalobacteraceae RepID=A6T2C3_JANMA Length = 211 Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 48/136 (35%), Positives = 65/136 (47%), Gaps = 23/136 (16%) Query: 49 IHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGA 108 + Y AD + L L +VS+H+L+ R +G + Q V + AWHAG S++ G Sbjct: 70 LDYEADPYFDQLRPL---RVSAHFLI-----RRDGT--VMQFVSANDRAWHAGASSFCGQ 119 Query: 109 TRLNDTSIGIELENRGWQKSAGVKY-FAPFEPAQIQALIPLAKDIIARYHIKPENVVAHA 167 R ND SIGIELE ++ A +Y ++A PL +V H Sbjct: 120 ERCNDFSIGIELEGTDFEAFADEQYAALAALTVALKAAYPLL------------HVTGHE 167 Query: 168 DIAPQRKDDPGPLFPW 183 IAP RK DPGP F W Sbjct: 168 HIAPGRKTDPGPFFDW 183 >UniRef50_C0R4G3 N-acetylmuramoyl-L-alanine amidase, family 2 n=9 Tax=Wolbachia RepID=C0R4G3_WOLWR Length = 525 Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 35/169 (20%) Query: 43 RIKVLVIHYT-ADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAG 101 ++ ++++H+T + TL + +S H++V + I +VP ++ AWHAG Sbjct: 99 KVLMVIVHHTETSTLKGTKDTLNARGLSVHFIV-------DRDGNITLMVPLEKEAWHAG 151 Query: 102 ISAWRGAT--------RLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDII 153 IS R +LN+ S+GIE+ N G + PF Q++++ L ++ Sbjct: 152 ISYARVKVDSKLEELRKLNNYSVGIEIVNTGLE---------PFPEEQMRSVKELILYLM 202 Query: 154 ARYHIKPENVVAHADIA----------PQRKDDPGPLFPWQQLAQQGIG 192 R+ IK + + +H++I RK DP LF W+ L + IG Sbjct: 203 ERFKIKRDMIFSHSEIGTIVYDPELGYTMRKPDPHKLFDWELLEKNEIG 251 >UniRef50_C9LCL1 N-acetylmuramoyl-L-alanine amidase CwlL n=2 Tax=Clostridiales RepID=C9LCL1_RUMHA Length = 469 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 26/161 (16%) Query: 27 EGYQLDTRRQAQAAYPRIKVLVIHYT-----ADDFDSSLATLTDKQVSSHYLVPAVPPRY 81 GY + + + RIK +VIHY A+D + ++ S+HY V + Sbjct: 8 SGYNFN-----KGSISRIKYIVIHYVGALGGAED-NCRYYGGGNRNASAHYFVG-----F 56 Query: 82 NGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQ-KSAGVK----YFAP 136 NG+ +WQ V + +AWH G S+++ A N SIGIE+ R KS G Y Sbjct: 57 NGE--VWQCVEDANIAWHCGASSYKHAECRNANSIGIEMCVRKKNTKSMGATDKDWY--- 111 Query: 137 FEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDP 177 FE A ++A L + ++ +Y + +V+ H D+ + +P Sbjct: 112 FEDATVEAAAELTRYLMNKYGVPASHVIRHYDVTGKICPNP 152 >UniRef50_C9Y7L0 1,6-anhydro-N-acetylmuramyl-L-alanine amidase ampD n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y7L0_9BURK Length = 196 Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 50/164 (30%), Positives = 67/164 (40%), Gaps = 29/164 (17%) Query: 50 HYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQ-----------ELAW 98 H + +F A+ V H + ++PP G P + QL W Sbjct: 39 HVPSPNFGPRPASAVVDLVVIHSI--SLPPGVYGGPEVQQLFTNTLDWDAHPXXXXXXXW 96 Query: 99 HAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHI 158 HAG S +R ND SIGIELE + F P Q ++L L + I Y I Sbjct: 97 HAGKSCYRDRDHCNDDSIGIELEGTEEDR---------FTPPQYESLHRLCRAIAQNYQI 147 Query: 159 KPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNF 202 + + H IAP RK DPGP F W +L WP+ +F Sbjct: 148 --QYLAGHEHIAPGRKTDPGPGFEWSELK-----LWPEISGWHF 184 >UniRef50_C5T4Q5 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4Q5_ACIDE Length = 230 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 54/162 (33%), Positives = 76/162 (46%), Gaps = 19/162 (11%) Query: 30 QLDTRRQAQAAYPRIKVLVIHYTADDFDS---SLATLTDKQVSSHYLVPAVPPRYNGKPR 86 + T+R Y I+ +VIH TA S S+ D S H+LVP +G Sbjct: 36 RCTTKRSVDPIY-GIRAVVIHATAGTSSSGAISVMKRRDDPASFHWLVPDEDEAQHGH-L 93 Query: 87 IWQLVPEQELAWHAGISAWR-----GATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQ 141 +W PE AWH +A GA R+N S+GIE+ N QK+ PF Q Sbjct: 94 VWACAPEALAAWHVRNAASHPDVNGGAGRVNHWSLGIEVVNA--QKND------PFSDWQ 145 Query: 142 IQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPW 183 I+A + + A+Y ++VV+HA + P R+ DPG F W Sbjct: 146 IEATARIVRYCWAKY-PNLKHVVSHAKLDPGRRSDPGEHFDW 186 >UniRef50_D0LQ75 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=4 Tax=Myxococcales RepID=D0LQ75_HALO1 Length = 551 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 64/157 (40%), Gaps = 38/157 (24%) Query: 46 VLVIHYTADDFDSSLATLTDKQ--VSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGIS 103 ++VIH + S + LT+ VS+HY+V +I QLV E + AWH G S Sbjct: 255 MVVIHTCEGSYSSCWSWLTNSASGVSAHYVVN------ESGSQISQLVRESQRAWHIGAS 308 Query: 104 ----------AWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDII 153 WR N +IGIE G + F QI A L DI Sbjct: 309 YQCSNNSSVDCWRNGYSSNHFTIGIE--------HGGFASQSSFPSGQIDASARLVCDIT 360 Query: 154 -------ARYHIKPENVVAHADIAPQRKDDPGPLFPW 183 RYHI V+H + P + DPGP +PW Sbjct: 361 RDQGIPRDRYHI-----VSHGQLQPYNRTDPGPNWPW 392 >UniRef50_Q1QZ97 Negative regulator of AmpC, AmpD n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZ97_CHRSD Length = 197 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 49/134 (36%), Positives = 61/134 (45%), Gaps = 21/134 (15%) Query: 60 LATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAW----RGATRLNDTS 115 AT+ +VS+H L+ R +G+ Q V AWHAG S W R LND S Sbjct: 64 FATIHALRVSAHVLI-----RRDGEAV--QFVGFDRRAWHAGRSRWWDGHRERRELNDFS 116 Query: 116 IGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARY-HIKPENVVAHADIAPQRK 174 IGIELE + AQ + L + + ARY + V +HA IAP RK Sbjct: 117 IGIELEG---------DEIHAYREAQYRCLARVFLALHARYPALTLARVTSHARIAPLRK 167 Query: 175 DDPGPLFPWQQLAQ 188 DPGP F W Q Sbjct: 168 TDPGPAFDWAYFRQ 181 >UniRef50_Q8ES14 Putative uncharacterized protein OB0830 n=1 Tax=Oceanobacillus iheyensis RepID=Q8ES14_OCEIH Length = 234 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 27/141 (19%) Query: 65 DKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGA----TRLNDTSIGIEL 120 D VS+HY++ + I++ V E A+HAG G +N SIGIEL Sbjct: 96 DYGVSTHYVI-------DRTGEIYRFVSEDRNAYHAGEGKIEGVPKYENNMNRYSIGIEL 148 Query: 121 ENRGWQKSAGVKYFAP------------FEPAQIQALIPLAKDIIARYH---IKPENVVA 165 G K + +P + Q AL L DI +R+H + +++ Sbjct: 149 LAIG-TKEEMMPMMSPELYDTISSKHIGYTDKQYDALQDLLIDISSRHHKLKLNRNHIIG 207 Query: 166 HADIAPQRKDDPGPLFPWQQL 186 H + AP+RK DPG LF W++L Sbjct: 208 HQEYAPERKTDPGALFDWERL 228 >UniRef50_B5GAH2 Amidase n=15 Tax=Streptomyces RepID=B5GAH2_9ACTO Length = 200 Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 24/149 (16%) Query: 41 YPRIKVLVIHYTADDFDSSLATLTD--KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAW 98 YP ++ +VIH T + F +LA + KQV++HY+V + + Q V E+++AW Sbjct: 64 YP-VEYVVIHVTQEYFTDTLAIFQNPAKQVTAHYVVRS------ADGHLAQCVREKDVAW 116 Query: 99 HAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHI 158 HAG W TR SIGIE E GW V F A +A L + RY + Sbjct: 117 HAG--NWDYNTR----SIGIEHE--GW-----VDRPEYFTDAMFEASAALTASVCERYGV 163 Query: 159 KP--ENVVAHADIAPQRKDDPGPLFPWQQ 185 E+++ H ++ DPG L+ W + Sbjct: 164 PKDREHILGHVEVPGTDHTDPGALWDWTK 192 >UniRef50_Q12NJ5 N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Shewanella denitrificans OS217 RepID=Q12NJ5_SHEDO Length = 272 Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 52/163 (31%), Positives = 75/163 (46%), Gaps = 34/163 (20%) Query: 47 LVIHYTA-DDFDSSLATLTDKQV--SSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGIS 103 +VIHYT ++ L + Q S+H ++ I QLVP ++AWHAG S Sbjct: 29 VVIHYTGGSTLAGAVEWLINPQAKASAHVVI-------GEAGDIVQLVPFNQVAWHAGKS 81 Query: 104 AWRGATRLNDTSIGIELENRGWQKSAGVKYFAPF-EP---------------------AQ 141 ++G + N SIGIEL N G G ++ A F +P A Sbjct: 82 HYQGRSNFNRFSIGIELVNPGQLTLVGQQHCAWFGDPYPQERVVKIPQKDSIQEAVWCAY 141 Query: 142 IQA-LIPLAKDIIARYHIKPEN-VVAHADIAPQRKDDPGPLFP 182 QA +I + + ++ P N +V H +I+P RK DPGP FP Sbjct: 142 TQAQIIAVKRLLLMLKEYYPINLLVGHDEISPGRKRDPGPAFP 184 >UniRef50_Q92IC3 Putative N-acetylmuramoyl-L-alanine amidase RC0497 n=9 Tax=Rickettsia RepID=Y497_RICCN Length = 267 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 30/200 (15%) Query: 46 VLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQL-VPEQELAWHAGISA 104 V++ + + D + L ++ S HY++ +G + + + +Q A++AG S+ Sbjct: 35 VVITYSVSKDIKAVREVLDERGASVHYIIDK-----DGTQKEYHNDLTDQ--AFYAGKSS 87 Query: 105 WRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARY---HIKPE 161 W+G +N IG+ L N + F QI L KD+ RY +K Sbjct: 88 WKGEVGVNKFGIGVMLINDAK---------SDFPAEQIGKLKEFLKDVTERYPNLDLK-H 137 Query: 162 NVVAHADIAPQRKDD----PGPLFPWQQLAQQGIGAWPDA---QRVNFYLAGRAPHTPVD 214 ++V ++ R+ + PG FPW++LA+ G G + + Q+ L+ + V+ Sbjct: 138 DLVGLGEVTVNREGNAHIAPGSKFPWKELAEAGFGRYFETTQEQKSKLLLSLDSTGEKVN 197 Query: 215 TASLLELLARYGYDVKPDMT 234 T L E L YGY V+ T Sbjct: 198 T--LQENLKEYGYGVESTST 215 >UniRef50_B3ZYJ5 N-acetylmuramoyl-L-alanine amidase, putative n=1 Tax=Bacillus cereus 03BB108 RepID=B3ZYJ5_BACCE Length = 246 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 25/144 (17%) Query: 62 TLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAG---ISAW-RGATRLNDTSIG 117 + D +S+HYL+ NG ++QLV E +A+HAG IS + +LN+ SIG Sbjct: 108 SFLDNGLSAHYLIDR-----NG--VVYQLVNENRVAYHAGKGSISNYPEYTNKLNEYSIG 160 Query: 118 IELENRGWQKSAGV-------KYFAP----FEPAQIQALIPLAKDIIAR---YHIKPENV 163 IEL G K + +P + Q ++L L +DI R E++ Sbjct: 161 IELLGIGTWKEMEIMMSRDTYDLISPHNIGYTDVQYKSLKLLLEDIRKRNQNIQNDREHI 220 Query: 164 VAHADIAPQRKDDPGPLFPWQQLA 187 + H + A RK DPG LF W ++ Sbjct: 221 LGHDEYAKDRKTDPGSLFDWSKVG 244 >UniRef50_B8FYR6 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=5 Tax=Desulfitobacterium hafniense RepID=B8FYR6_DESHD Length = 242 Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 50/166 (30%), Positives = 79/166 (47%), Gaps = 34/166 (20%) Query: 35 RQAQAAYPRIKVLVIHYTADDFDSSLATLTD--KQVSSHYLVPAVPPRYNGKPRIWQLVP 92 RQ ++ ++ ++ H TA + L+ + + Q SSHYLV RI QLV Sbjct: 12 RQGRSG-NQVFAIINHITAGRYPGCLSWMQNPASQASSHYLVLK-------DGRILQLVK 63 Query: 93 EQELAWHAGIS---AWR--GATRLNDTSIGIE---LENRGWQKSAGVKYFAPFEPAQIQA 144 +++ AWHAG+ W+ N +IGIE LE G AQ Q+ Sbjct: 64 DEDTAWHAGLVNKPNWKLYNGKNPNLYTIGIEHEALEGEG------------LTDAQYQS 111 Query: 145 LIPLAKDIIARY-HIKP--ENVVAHADI-APQRKDDPGPLFPWQQL 186 + L ++A++ IKP ++++ H + R +DPG FPW+QL Sbjct: 112 TLWLHGQLLAKFPAIKPDSDHIIGHYRTDSVNRPNDPGAKFPWEQL 157 >UniRef50_A0Q0S8 N-acetylmuramoyl-L-alanine amidase cwlL (Cellwall hydrolase) (Autolysin) n=7 Tax=Clostridiales RepID=A0Q0S8_CLONN Length = 431 Score = 53.1 bits (126), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 28/149 (18%) Query: 38 QAAYPRIKVLVIHYTADDFDSSLATLT-----DKQVSSHYLVPAVPPRYNGKPRIWQLVP 92 ++ IK +V+H T + D++LA ++ S+HY V + I Q+V Sbjct: 166 HSSGNNIKFIVMHDTGNYKDTALANANYFGGGNRNASAHYFVD--------ENNIVQVVE 217 Query: 93 EQELAWHAGISAWR-GATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKD 151 + AWH G G T N SIGIE+ N G Y A A I + L K Sbjct: 218 DSNAAWHCGDGHGNYGIT--NHNSIGIEMCNSG-------GYIAD---ATINNALWLVKK 265 Query: 152 IIARYHIKPENVVAHADIAPQRKDDPGPL 180 + A+Y+I +NVV H D RK+ P + Sbjct: 266 LQAKYNIDNDNVVRHYD--ASRKNCPANM 292 >UniRef50_UPI00016C05EA N-acetylmuramoyl-L-alanine amidase n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C05EA Length = 197 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 30/156 (19%) Query: 24 VEKEGYQLDTRRQAQAAYP--RIKVLVIHY------TADDFDSSLATLTDKQVSSHYLVP 75 V K Y LD ++ +P +I +V+HY TA++ +LT++ SSHY+V Sbjct: 31 VPKILYPLDPNPMSRPGFPMEKISGIVVHYVNNPGSTAENNRDYFNSLTERYASSHYIVG 90 Query: 76 AVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFA 135 + I VPE+E+A+HA G +N + IGIE+ F Sbjct: 91 L-------QGEIILCVPEEEVAYHA------GNRNVNYSHIGIEV--------CHPDTFG 129 Query: 136 PFEPAQIQALIPLAKDIIARYHIKPE-NVVAHADIA 170 F +LI L K + +Y + P+ +V+ H D+ Sbjct: 130 KFSDITYNSLIDLTKQLCRKYKLNPQTDVIRHYDVT 165 >UniRef50_A6GDD4 Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GDD4_9DELT Length = 574 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 69/159 (43%), Gaps = 29/159 (18%) Query: 45 KVLVIHYTADDFDSSLATLTDKQ--VSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGI 102 ++++IH + + L++ Q VS+HY++ N + QLV E + AWH G Sbjct: 244 EMVIIHSCEGSYSGCWSWLSNSQAGVSAHYVIN------NSGSEVSQLVRENKKAWHIGA 297 Query: 103 S----------AWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDI 152 S + + N+ +IGIE AG A + I L DI Sbjct: 298 SYNCSLNNSTKCNKNGSSSNNFTIGIE--------HAGYANQASWSNGLITTSAELVCDI 349 Query: 153 IARYHIKPE--NVVAHADIAPQRKDDPGPLFPWQQ-LAQ 188 + I + ++VAH + P + DPGP +PW LAQ Sbjct: 350 TQAWGIPRDQYHIVAHGTLQPYNRIDPGPNWPWANYLAQ 388 >UniRef50_D1CGY2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CGY2_THET1 Length = 638 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 31/175 (17%) Query: 44 IKVLVIHYTADDFDSSLATLTDKQ-VSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGI 102 I+ +VIH T + S+L+T T + VS+HYL+ + + QLVP +++AW AG Sbjct: 271 IQYIVIHDTEGSYASALSTFTSQSYVSAHYLI------RSSDGLVTQLVPTKDVAWQAG- 323 Query: 103 SAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPE- 161 W +N SIGIE E G+ Y + + L + + AR+HI + Sbjct: 324 -NW----YVNIHSIGIEHE--GFAVEGATWYTEQMYRSSAR----LVRYLAARFHIPLDR 372 Query: 162 -NVVAHADI---APQRKD----DPGPLFPWQQ-LAQQGIGAWPDAQRVNFYLAGR 207 +++ H D+ P + DPGP + W +A GI P +QR + AGR Sbjct: 373 AHILGHDDVPGPGPAYQGRMHWDPGPYWDWAHYMALLGIA--PRSQRAHGVTAGR 425 >UniRef50_B3QCK8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Rhodopseudomonas palustris TIE-1 RepID=B3QCK8_RHOPT Length = 464 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 56/220 (25%), Positives = 86/220 (39%), Gaps = 60/220 (27%) Query: 24 VEKEGYQLDTRRQAQAAYPRI-KVLVIHYTADDFDSSLATL------TDKQVSSHYLVPA 76 + ++G ++ ++ P + KV+V+H TA + + Q SS ++V Sbjct: 10 IYRDGKAVNFQQTKNIGGPIVPKVIVLHDTAGHLHGRDSIVWLRGGPGQSQNSSAHVV-- 67 Query: 77 VPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQ---------- 126 I QL WHAGIS WRG LN ++GIE+ N G Sbjct: 68 ----IGRDGTITQLAAFNVKTWHAGISNWRGRANLNGWAVGIEIVNPGGPLRTLGNGRYQ 123 Query: 127 -------------------------------KSAGVKYFAPFEPAQIQALIPLAKDIIAR 155 ++AG Y+ P QI A++ L + ++A Sbjct: 124 GIDLIDTKADPSLKVRPGVFPPLTPDGKAVPRTAG--YWLEHSPEQIDAVVELCRALVAA 181 Query: 156 YHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWP 195 Y E +V H IAP RK D PLFP ++ ++ WP Sbjct: 182 YPTITE-IVTHWMIAPTRKVDTNPLFPIDEVRRR---VWP 217 >UniRef50_B5HCN0 Secreted protein n=3 Tax=Streptomyces RepID=B5HCN0_STRPR Length = 895 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 47/153 (30%), Positives = 71/153 (46%), Gaps = 29/153 (18%) Query: 44 IKVLVIHYTADDFDSSLATLTDKQV--SSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAG 101 I+ +VIH T +D SLA LT+ V S+HYL+ A + Q++ + LAWHAG Sbjct: 277 IRQIVIHDTEGGYDGSLAALTNPDVPGSAHYLIRAS------DGLVTQMIENKHLAWHAG 330 Query: 102 ISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHI--K 159 W N +IG+E E G+ G Y P Q Q+ L K + +Y++ Sbjct: 331 --NW----THNMHAIGVEHE--GYAIKEGKWYTEP----QYQSSADLVKFLATKYNVPLD 378 Query: 160 PENVVAHADIAPQRKD-------DPGPLFPWQQ 185 E+++ H ++A Q D GP + W Sbjct: 379 REHIIGHDEVALQTDAGMANLHWDAGPYWDWNH 411 >UniRef50_B2U693 N-acetylmuramoyl-L-alanine amidase family protein n=10 Tax=Proteobacteria RepID=B2U693_ECOLX Length = 96 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 26/60 (43%), Positives = 34/60 (56%) Query: 214 DTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKY 273 D ++ L YGY + T + ++ AFQ+HFR Y+G DAET AI ALLEKY Sbjct: 33 DKVDIVSRLKTYGYSISGVKTDDGYKALVRAFQLHFRQKNYDGIMDAETAAILYALLEKY 92 >UniRef50_C0A8M7 Negative regulator of beta-lactamase expression-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A8M7_9BACT Length = 141 Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 46/125 (36%), Positives = 57/125 (45%), Gaps = 22/125 (17%) Query: 65 DKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRG 124 + QVS H L+ R +LV ++ +AWHAG S + G TR ND +G+ Sbjct: 14 ESQVSYHVLIATDGVRA-------RLVADEHIAWHAGASNFLGRTRCNDFLLGVSF---- 62 Query: 125 WQKSAGVKYFAPFEPAQI-QALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFP- 182 AG P AQI AL LA AR P + H IAP RKDD LFP Sbjct: 63 ----AGNTRLTPLTEAQIASALDWLAPRWFAR-GWTPAVMTDHRQIAPGRKDD---LFPA 114 Query: 183 -WQQL 186 W +L Sbjct: 115 EWMRL 119 >UniRef50_Q1ARF9 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ARF9_RUBXD Length = 496 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 46/146 (31%), Positives = 66/146 (45%), Gaps = 23/146 (15%) Query: 44 IKVLVIHYTADDFDSSLATLTD--KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAG 101 I +VIH T + S++ D QVS+HY V + +GK I Q V E ++AWHAG Sbjct: 222 INRIVIHVTQGSWSSAINWFKDGRAQVSAHYTVRSS----DGK--IGQSVREADIAWHAG 275 Query: 102 ISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYH--IK 159 W N SIGIE E QK F A ++ LA + +Y I Sbjct: 276 --NW----DYNTHSIGIEHEGYVSQKRW-------FTDAMYRSSARLAAYLCKKYRIPID 322 Query: 160 PENVVAHADIAPQRKDDPGPLFPWQQ 185 ++++ H + DPGP + W + Sbjct: 323 RKHIIGHNQVPGADHTDPGPYWNWDR 348 >UniRef50_B6BVD5 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=beta proteobacterium KB13 RepID=B6BVD5_9PROT Length = 134 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 16/86 (18%) Query: 63 LTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELEN 122 + D +VS+H+L+ + NG+ + Q V + AWHAG S+++G ND SIGIELE Sbjct: 30 IKDLKVSAHFLI-----KRNGE--LIQFVSCNDRAWHAGESSYQGKENCNDFSIGIELEG 82 Query: 123 RGWQKSAGVKYFAPFEPAQIQALIPL 148 PFE Q LI L Sbjct: 83 DDE---------TPFEDDQYIKLIEL 99 >UniRef50_D2AU78 N-acetylmuramoyl-L-alanine amidase n=5 Tax=Bacteria RepID=D2AU78_STRRD Length = 508 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 29/168 (17%) Query: 25 EKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTD--KQVSSHYLVPAVPPRYN 82 Y + R + A I +VIH T + +++ + QVS+HY+V + Sbjct: 223 SSSNYTVSNRPTSNA----IDRIVIHVTQGSYAGTISWFQNPAAQVSAHYVVRS------ 272 Query: 83 GKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQI 142 + Q+V E++ AWHA W N S+GIE E G+ A + F A Sbjct: 273 SDGDVTQMVREKDRAWHA--RDW------NSRSVGIEHE--GYVNDA-----SWFTDAMY 317 Query: 143 QALIPLAKDIIARYHIKPE--NVVAHADIAPQRKDDPGPLFPWQQLAQ 188 ++ L ++I RY I + ++V H ++ DPGP + W + Q Sbjct: 318 RSSAALTRNIADRYGIPKDRAHIVGHVEVPGNDHTDPGPNWDWTRYMQ 365 >UniRef50_D2AQX4 Negative regulator of beta-lactamase expression-like protein n=4 Tax=Actinomycetales RepID=D2AQX4_STRRD Length = 467 Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 23/154 (14%) Query: 44 IKVLVIHYTADDFDSSLATLTD--KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAG 101 I +VIH T + +++ + VS+HY+V + + Q+V ++++AWHAG Sbjct: 237 IDRIVIHVTQGSYAGTISWFQNPSASVSAHYVV------RSSDGAVTQMVRDKDVAWHAG 290 Query: 102 ISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPE 161 W TR S+GIE E V + F A ++ L + I RY I + Sbjct: 291 --NWSYNTR----SVGIEHEGY-------VSDASWFTDAMYRSSAALTRHIADRYGIPKD 337 Query: 162 --NVVAHADIAPQRKDDPGPLFPWQQLAQQGIGA 193 +++ H + DPGP + W + Q G Sbjct: 338 RAHIIGHNQVPGATHTDPGPYWDWNRYMQYVTGG 371 >UniRef50_D1WWE1 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=7 Tax=Streptomyces RepID=D1WWE1_9ACTO Length = 519 Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%) Query: 44 IKVLVIHYTADDFDSSLATLTD--KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAG 101 + +VIH T + S++ + +VS+HY + + + Q V E++ AWHAG Sbjct: 236 VDKVVIHTTQGSYAGSISWYQNPASKVSAHYTI------RSSDGEVTQSVLEKDTAWHAG 289 Query: 102 ISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPE 161 + N +S+GIE E V A + A ++ L K + ARY I P+ Sbjct: 290 ST--------NSSSVGIEHEGY-------VDNPAWYTEAMYRSSAELTKHLAARYGI-PK 333 Query: 162 N---VVAHADIAPQRKDDPGPLFPWQQ 185 N ++ H++ DPGP + W Sbjct: 334 NRSHIIGHSEAPGADHTDPGPNWDWNH 360 >UniRef50_D1SAT8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1SAT8_9ACTO Length = 516 Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 27/168 (16%) Query: 25 EKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQ--VSSHYLVPAVPPRYN 82 Y + +R ++AYP I +VIH + S++ + S+HYL+ + Sbjct: 225 NSSNYTVSSR---ESAYP-INYIVIHTMQGSYAGSISWFQNAAAGTSAHYLLRS------ 274 Query: 83 GKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQI 142 + Q+V ++++AWHAG W N SIGIE E G+ SA + + A Sbjct: 275 SDGAVTQMVRDKDIAWHAG--NW----TYNTQSIGIEHE--GYVDSA-----SWYTDAMY 321 Query: 143 QALIPLAKDIIARYHI--KPENVVAHADIAPQRKDDPGPLFPWQQLAQ 188 ++ L + + +Y I N++ H + DPGP + W Q Sbjct: 322 RSSAALTRFLCDKYGIPKTRNNIIGHNQVPGATHTDPGPNWNWTYYMQ 369 >UniRef50_A5GTP3 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Synechococcus sp. RCC307 RepID=A5GTP3_SYNR3 Length = 297 Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 79/185 (42%), Gaps = 36/185 (19%) Query: 19 GEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTD------KQVSSHY 72 GE+ ++ +G ++D P V+V+H T S++ T T Q S H Sbjct: 121 GERVHLDAQGQRID---------PTPAVIVLHETVYSLGSAINTFTTPHPNDADQASYHT 171 Query: 73 LVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRG---------ATRLNDTSIGIELENR 123 LV K I Q+V + A+ AG SA+ G + LN+ ++ + LE Sbjct: 172 LV-------GQKGEIVQVVDPSKRAYGAGHSAFDGRWVFTSKHFSGSLNNFALHVSLETP 224 Query: 124 GWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVA--HADIAPQRKDDPGPLF 181 ++ K+ + PAQ AL + D + RY I+P + H D+ R D F Sbjct: 225 PDGATSAQKHSG-YTPAQYDALSRVLADWMVRYKIEPHAITTHRHVDLGNARSDPRS--F 281 Query: 182 PWQQL 186 WQQL Sbjct: 282 DWQQL 286 >UniRef50_D2BEW5 Negative regulator of beta-lactamase expression-like protein n=2 Tax=Streptosporangium roseum DSM 43021 RepID=D2BEW5_STRRD Length = 480 Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 33/153 (21%) Query: 44 IKVLVIHYTADDFDSSLATLTD--KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAG 101 I +VIH T + +++ + QVS+HY+V + + Q+V E+ A+HAG Sbjct: 235 IDRIVIHVTQGSYAGTISWFQNPAAQVSAHYVV------RSSDGDVTQMVREKNRAFHAG 288 Query: 102 ISAWRGATRLNDTSIGIE----LENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYH 157 N S+GIE ++N W F A ++ L ++I RY Sbjct: 289 --------SFNRRSVGIEHEGYVDNASW-----------FTDAMYRSSAALTRNIADRYG 329 Query: 158 IKPE--NVVAHADIAPQRKDDPGPLFPWQQLAQ 188 I + ++V H + DPGP + W + Q Sbjct: 330 IPKDRAHIVGHHQVPGTDHTDPGPNWNWTKYMQ 362 >UniRef50_C4DNA4 Negative regulator of beta-lactamase expression n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DNA4_9ACTO Length = 330 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 32/151 (21%) Query: 44 IKVLVIHYTADDFDSSLATLTD--KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAG 101 I +VIH + A + +V++HYLV + K + Q+V E ++AWHAG Sbjct: 62 INKVVIHTMQGTASGTKAWFRNPKSEVTTHYLVSS------SKGSVTQMVHESDIAWHAG 115 Query: 102 ISAWRGATRLNDTSIGIELEN-----RGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARY 156 W N TSIGIE E + W + ++ L + I RY Sbjct: 116 --NW----DYNKTSIGIEHEGYVQDPKKW-----------YTTNMYESSARLVRSICDRY 158 Query: 157 HI--KPENVVAHADIAPQRKDDPGPLFPWQQ 185 +I ++++AH+++ DPG + W + Sbjct: 159 NIPMDRKHIIAHSEVPGATHTDPGKGWNWDR 189 >UniRef50_D2PZI0 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PZI0_9ACTO Length = 455 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 25/163 (15%) Query: 44 IKVLVIHYTADDFDSSLATLTD--KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAG 101 I +VIH T + +++ + QVS+HY++ + ++ Q+V E++ AWH Sbjct: 238 ISTIVIHVTQGSYTGTISWFKNPASQVSAHYVI------RSSDGQVTQMVAEKDTAWH-- 289 Query: 102 ISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPE 161 A N ++GIE E GW V + F A ++ L + I R I + Sbjct: 290 ------ARSTNPYTVGIEHE--GW-----VDQPSWFTDAMYRSSAALTRSIADRRGIPKD 336 Query: 162 --NVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNF 202 ++ H ++ DPGP + W Q G P + + Sbjct: 337 RAHIRGHNELPDNDHTDPGPNWNWTYYMQLVNGGTPTSNFTTY 379 >UniRef50_C7MM46 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MM46_CRYCD Length = 339 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 26/141 (18%) Query: 43 RIKVLVIHYTADD----FDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAW 98 R + + +HYT++ ++S A + S HY++ +QL+ + + AW Sbjct: 20 RCEYIAVHYTSNSAPARSEASYAQNSQHSSSYHYVLDGY--------ECYQLLNDTDTAW 71 Query: 99 HAGISAWRGATRL--NDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARY 156 + W G T+L N +I IE+ N G F+ E Q++ L+ L ++ R+ Sbjct: 72 --AVGTWPGYTQLISNRQAISIEVCNAG-------GSFSDAERDQLRELVAL---LMERH 119 Query: 157 HIKPENVVAHADIAPQRKDDP 177 I ++VV H D RK+ P Sbjct: 120 SIDADHVVRHWDCHTGRKECP 140 >UniRef50_A7NJ74 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=5 Tax=Chloroflexaceae RepID=A7NJ74_ROSCS Length = 644 Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 20/137 (14%) Query: 43 RIKVLVIHYTADDFDSSLATLT--DKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHA 100 +I+++V+H A SL T+ HY V A I+QL+ ++ A+H+ Sbjct: 513 KIRLIVLHGDAGPALQSLETMAMPGSPRMPHYYVAA-------HGAIYQLIDDEFAAFHS 565 Query: 101 GISAWRGATR-LNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIK 159 G++ W GA R +N +SIG+ LE + + A +AL L + A+Y+I Sbjct: 566 GMAYWDGARRNINRSSIGVMLE----------RPHTGYTDASQRALSWLIAHLRAKYNIP 615 Query: 160 PENVVAHADIAPQRKDD 176 VV +D++P D Sbjct: 616 ASGVVRWSDLSPDAAGD 632 >UniRef50_D1XLT9 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Streptomyces sp. ACTE RepID=D1XLT9_9ACTO Length = 444 Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 29/154 (18%) Query: 44 IKVLVIHYTADDFDSSLATLTD--KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAG 101 ++ +V+H T D+D++L D + S+HY+V + + Q+V +++AW AG Sbjct: 78 VEFIVLHDTEVDYDTTLKIFQDPANKTSAHYVV------RSADGHVTQMVKNKDVAWQAG 131 Query: 102 ISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHI--K 159 W LN SIGIE E + G K++ A ++ L + + A Y I Sbjct: 132 --NW----YLNTHSIGIEQEG---VAAEGAKWYT---DAMYRSTARLVRHLAAVYDIPLD 179 Query: 160 PENVVAHADIAPQRKD-------DPGPLFPWQQL 186 ++++ H + P DPGP + W + Sbjct: 180 RQHILGHDGVPPTSAAGTQNMHWDPGPYWDWNRF 213 >UniRef50_A9B3J4 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B3J4_HERA2 Length = 426 Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 18/115 (15%) Query: 73 LVPAVPPRYN----GKPRIWQLVPEQE-LAWHAGISAW-RGAT--RLNDTSIGIELENRG 124 L P V YN + + V E+ +AWHAG+ +W RG + +N +IG+E+E Sbjct: 42 LRPEVRSSYNYLIARDGKTYHYVNEKSYIAWHAGVRSWARGYSGGEINVYAIGVEVE--- 98 Query: 125 WQKSAGVKYFAPFEPAQIQALIPLAKDIIARYH--IKPENVVAHADIAPQRKDDP 177 G P AQ +AL+ L + Y I + AH+ +AP KDDP Sbjct: 99 -----GPNDGTPITTAQTKALVELIRYFRDTYAIPINRDYFFAHSTVAPGYKDDP 148 >UniRef50_C7N6M2 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N6M2_SLAHD Length = 268 Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 33/156 (21%) Query: 29 YQLDTRRQAQAAYPR----IKVLVIHYTADDFDSSLATLT--------DKQVSSHYLVPA 76 Y+++ + PR +K +V+HYT ++ A L D+Q S+HY + Sbjct: 3 YEINKHHGSYNIQPRSASAVKYIVVHYTGSGTSAAPAALNNCQYFSGGDRQASAHYFID- 61 Query: 77 VPPRYNGKPRIWQLV-PEQELAWHAGISAWRGATRLNDT-SIGIELENRGWQKSAGVKYF 134 I++ P + L WH G RG + +T SIGIE+ G Sbjct: 62 -------DETIYEYADPSRHLTWHVGDG--RGKYGITNTNSIGIEVCQDG---------D 103 Query: 135 APFEPAQIQALIPLAKDIIARYHIKPENVVAHADIA 170 PF A+ + L L + ++ Y + + VV H D + Sbjct: 104 RPFTEAETKRLQWLVRRLMDEYGVPADRVVRHYDAS 139 >UniRef50_C0WQZ5 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC n=3 Tax=Lactobacillus RepID=C0WQZ5_LACBU Length = 604 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 29/154 (18%) Query: 43 RIKVLVIHYTADDFD--SSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHA 100 +I +VIH T FD ++L T S++Y++ + + + ++V Q +AWHA Sbjct: 244 KINYIVIHNTETTFDEATNLFASTPSYTSANYVISSE------QGTVAEMVRPQNVAWHA 297 Query: 101 GISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHI-- 158 G W +N SIGIE E G+ G Y A Q+ L K + A+Y+I Sbjct: 298 G--NW----YINSHSIGIEHE--GYAAVGGYWY----TEAMYQSSAALVKYLAAKYNIPL 345 Query: 159 KPENVVAHADI-----APQRKD--DPGPLFPWQQ 185 ++++ H ++ A Q+ DPG + WQ Sbjct: 346 DRQHIIGHDNVPGLTPAAQKTMHWDPGTYWNWQH 379 >UniRef50_D0LH65 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LH65_HALO1 Length = 233 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 33/150 (22%) Query: 47 LVIHYTADDFDSSLA---------TLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELA 97 ++ HYTA D ++ A T ++ S H + + + IWQ+V A Sbjct: 88 IMAHYTATDPGTARAMAERRVRERTSQNRPASWHITI-------DHEGTIWQMVAASACA 140 Query: 98 WHAGISAWRGAT----RLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDII 153 WH G + +N +GIELE G + F AQI+A + + ++ Sbjct: 141 WHCARGKVDGPSGKKLSINQAVVGIELEGHGEE----------FTAAQIEAACRVWRALV 190 Query: 154 ARYHIKPEN--VVAHADIAPQRKDDPGPLF 181 Y I P++ ++ H+ P R+ DPGP++ Sbjct: 191 RTYAI-PDHLAMLEHSRYDPGRRVDPGPVW 219 >UniRef50_Q026T4 N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q026T4_SOLUE Length = 382 Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 30/153 (19%) Query: 59 SLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGA----TRLNDT 114 SL + ++ H+L+ R+ R++++V E + A HAG S W LND+ Sbjct: 181 SLISYVGRRRCYHFLID----RFG---RVFRIVNESDAADHAGHSVWADDRYLYVNLNDS 233 Query: 115 SIGIELENR----GWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIA 170 IG+ E + G SAG AQ+++ L + + +RY I N V HA ++ Sbjct: 234 FIGVSFEAQTGLGGDATSAG--------GAQVRSAAMLTEMLRSRYKIPARNCVTHAQVS 285 Query: 171 PQRKD-------DPGPLFPWQQLAQQGIGAWPD 196 + D FP+++L AWP Sbjct: 286 VNPSNMQIGYHIDWASSFPFEKLGLPDNYAWPS 318 >UniRef50_C9N2Y5 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9N2Y5_9ACTO Length = 443 Score = 43.1 bits (100), Expect = 0.010, Method: Compositional matrix adjust. Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 29/154 (18%) Query: 44 IKVLVIHYTADDFDSSLATLTD--KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAG 101 +K +V+H T D+D++L + Q S+HY+V + + Q+V +++AW AG Sbjct: 77 VKFIVLHDTEVDYDTTLKIFQNPANQTSAHYVV------RSADGHVTQMVKNKDVAWQAG 130 Query: 102 ISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHI--K 159 W LN SIGIE E + G ++ ++ L + + A+Y I Sbjct: 131 --NW----YLNTHSIGIEQEGVA---AEGATWYT---SEMYRSTARLVRYLAAKYDIPLD 178 Query: 160 PENVVAHADIAPQRKD-------DPGPLFPWQQL 186 ++++ H + P DPGP + W + Sbjct: 179 RQHILGHDGVPPTSAAGTKNMHWDPGPYWDWNRF 212 >UniRef50_Q7V7M8 N-acetylmuramoyl-L-alanine amidase (Family 2) n=2 Tax=Prochlorococcus marinus RepID=Q7V7M8_PROMM Length = 312 Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 27/165 (16%) Query: 42 PRIKVLVIHYTADDFDSSLATLTD------KQVSSHYLVPAVPPRYNGKPRIWQLVPEQE 95 P V+++H T D + S+L D QVS H L+ +I +V Sbjct: 143 PTPSVVILHETTDSYQSALYAFKDYHRKDEDQVSYHTLITL-------DGQIIDVVDPLN 195 Query: 96 LAWHAGISAWRG---------ATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALI 146 A+ AG SA+ G +N+ ++ + LE W G + + Q +L Sbjct: 196 RAYGAGNSAFLGEWVVTNPRFKGSVNNFALHLSLET-PWDGRNGYLNHSGYSDKQYDSLA 254 Query: 147 PLAKDIIARYHIKPENVVA--HADIAPQRKDDPGPLFPWQQLAQQ 189 + D + R++I PEN+ H D+A +R D F W L ++ Sbjct: 255 LVLADWMDRFNIPPENITTHQHVDLAGERSDPRS--FDWSNLQRR 297 >UniRef50_D1X7T3 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=19 Tax=Streptomyces RepID=D1X7T3_9ACTO Length = 249 Score = 42.0 bits (97), Expect = 0.022, Method: Compositional matrix adjust. Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 24/146 (16%) Query: 44 IKVLVIHYTADDFDSSLATLTD--KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAG 101 + ++IH T F S++ D Q ++HY+V R+ Q++ E ++A+ AG Sbjct: 101 VDRVIIHVTQGSFASAVKVFQDPAHQAATHYIV-------GQDGRVVQMIRELDVAYQAG 153 Query: 102 ISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHI--K 159 A+ N+ ++GIE E V A + L I AR+ I Sbjct: 154 NRAY------NERAVGIEHEGF-------VDRPKDLTKAMYASSARLTASICARHGIPVD 200 Query: 160 PENVVAHADIAPQRKDDPGPLFPWQQ 185 E+++ H ++ DPGP + W + Sbjct: 201 REHIIGHVEVPGTDHTDPGPHWDWDR 226 >UniRef50_C0QM08 Putative N-acetylmuramoyl-L-alanine amidase AmpD n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QM08_DESAH Length = 439 Score = 42.0 bits (97), Expect = 0.024, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 19/142 (13%) Query: 45 KVLVIHYTADDFDSSLATLTD-KQVSSHYLVPAVPPRY----NGKPRIWQLVPEQELAWH 99 + +++H + ++L +++ KQ + P Y NG +Q++ +Q + H Sbjct: 65 RYIIVHTSELGLSATLRVVSEGKQFKNGRSTPGGHANYVIARNGV--TYQIMDKQFRSDH 122 Query: 100 AGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIK 159 AG+S W G ++ S+GIEL ++AP AQ +++ L + Y + Sbjct: 123 AGLSMWNGQNDISSVSLGIELVGH---------HYAPLTSAQYRSVAMLIDMLQKAYGLD 173 Query: 160 PENVVAHADIAPQRKDDPGPLF 181 + V+ H+ +A R P P F Sbjct: 174 DKAVLTHSQVAYGR---PNPWF 192 >UniRef50_Q31KQ2 N-acetylmuramoyl-L-alanine amidase, family 2 n=2 Tax=Synechococcus elongatus RepID=Q31KQ2_SYNE7 Length = 317 Score = 41.6 bits (96), Expect = 0.033, Method: Compositional matrix adjust. Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 36/188 (19%) Query: 19 GEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATL------TDKQVSSHY 72 G++ V++ G +D R I ++V+H T DS++ + Q S H Sbjct: 122 GDRAAVDRNGQPVDNR---------ISLIVLHETVASADSAINFFQTPHPRDEDQASYHA 172 Query: 73 LVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRG-ATR--------LNDTSIGIELENR 123 L+ R NG I VP ++ A+ AG S++RG A R +N+ S+ + LE+ Sbjct: 173 LI-----RRNGT--IVYTVPPEKRAFGAGSSSFRGEAVRFNPKLPGSVNNFSLHVSLESP 225 Query: 124 GWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHA--DIAPQRKDDPGPLF 181 + ++ + Q +L LA+ + Y I + + HA D + R D F Sbjct: 226 ADGRDNRRRHSG-YTARQYDSLALLAQQWMTTYTIPGDRITTHAAVDRSGSRMDPRS--F 282 Query: 182 PWQQLAQQ 189 W +LAQ+ Sbjct: 283 QWARLAQR 290 >UniRef50_Q0AY32 Negative regulator of beta-lactamase expression-like protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AY32_SYNWW Length = 222 Score = 41.2 bits (95), Expect = 0.034, Method: Compositional matrix adjust. Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 22/148 (14%) Query: 47 LVIHYTADDFDSSLATLTD--KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGIS- 103 +V H TA +L+ L + +VS+H+L+ + +I+QLV E++ AW GI Sbjct: 29 IVNHITAGLLPGALSWLQNPASRVSTHFLISR-------QGQIFQLVKEEDTAWANGIVN 81 Query: 104 --AWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHI--K 159 W N + +E+ + Q QA + L + +++R++I Sbjct: 82 QPNWVLYDGSNPNFYTLSIEHEALAGDS-------LSEEQYQASLCLHRLLVSRFNIAVD 134 Query: 160 PENVVAHADI-APQRKDDPGPLFPWQQL 186 E+++ H I + R + PG FPW++L Sbjct: 135 EEHIIGHYRIDSINRSNCPGSRFPWKRL 162 >UniRef50_Q9FC03 Putative secreted amidase n=2 Tax=Streptomyces RepID=Q9FC03_STRCO Length = 642 Score = 41.2 bits (95), Expect = 0.038, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 30/155 (19%) Query: 43 RIKVLVIHYTADDFDSSLATLTD--KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHA 100 RI +VIH +D+ +A L + S+HY++ + + Q+VP +++A+HA Sbjct: 268 RIDTIVIHDLESTYDAGVAGLANPTNPASTHYVM-------SSSGAVTQMVPTKDIAFHA 320 Query: 101 GISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHI-- 158 G +T L+ SIGIE E +A + +Q QA L K + R+ + Sbjct: 321 G----NYSTNLH--SIGIEHEGFAAHGAAW------YTESQYQATADLVKYLAERFGVPL 368 Query: 159 KPENVVAHADIAPQRKD-------DPGPLFPWQQL 186 ++V+ H ++A DPG + W Sbjct: 369 DRQHVIGHDNVAGPNSALVAGMHWDPGYAWDWNHF 403 >UniRef50_B2SIS3 N-acetylmuramoyl-L-alanine amidase, putative n=20 Tax=Xanthomonadaceae RepID=B2SIS3_XANOP Length = 191 Score = 40.8 bits (94), Expect = 0.045, Method: Compositional matrix adjust. Identities = 54/177 (30%), Positives = 72/177 (40%), Gaps = 42/177 (23%) Query: 35 RQAQAAYPRIKVLVIHYT-------ADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRI 87 R A +I ++VIH T A ++ + + S HY + NG I Sbjct: 21 RLTTRALTQIDMVVIHCTELPDMAMAREYGERVLYDSGTGNSGHYYL-----DRNGS--I 73 Query: 88 WQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRG----WQKSAGVKYFAPFEPAQIQ 143 Q V + +A H RG N ++GIEL NRG W S + P+ AQI Sbjct: 74 QQYVALERVAHHV-----RGH---NLHTLGIELVNRGRYPHWLDSRHQEMTEPYPEAQIA 125 Query: 144 ALI----------PLAKDIIARYHIKPENVVAHADIAP----QRKDDPGPLFPWQQL 186 ALI P + I H + A AP QRK DPGPLFPW ++ Sbjct: 126 ALISLLQWLQQQLPSVRRIAG--HQALDTTQEAASDAPERNIQRKLDPGPLFPWPRI 180 >UniRef50_Q9ZX49 Gp29 n=1 Tax=Mycobacterium phage TM4 RepID=Q9ZX49_BPMT4 Length = 547 Score = 40.0 bits (92), Expect = 0.095, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 6/89 (6%) Query: 96 LAWHAGISAWRG--ATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDII 153 +AWHAG+ ++ G N +IGIE +N G G + + AQ A + I Sbjct: 265 IAWHAGVGSYPGLPEDNANAVTIGIEAQNSG--TYDGAPHRTNWPDAQYDAYVKCCAAIC 322 Query: 154 ARYHIKPENVVAHADIA--PQRKDDPGPL 180 R ++ ++V++H + A Q K DPG + Sbjct: 323 RRLGVRADHVISHKEWAGRKQGKWDPGAI 351 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P75820 N-acetylmuramoyl-L-alanine amidase amiD n=119 Ta... 427 e-118 UniRef50_C5BFW7 N-acetylmuramoyl-L-alanine amidase AmiD n=14 Tax... 363 3e-99 UniRef50_A1V4B3 N-acetylmuramoyl-L-alanine amidase domain protei... 353 4e-96 UniRef50_A7FHD3 N-acetylmuramoyl-L-alanine amidase, family 2 n=2... 352 6e-96 UniRef50_D1P770 N-acetylmuramoyl-L-alanine amidase, family 2 n=3... 348 9e-95 UniRef50_Q1QX12 Negative regulator of AmpC, AmpD n=1 Tax=Chromoh... 334 2e-90 UniRef50_A9KGI9 Anhydro-N-acetylmuramyl-tripeptide amidase n=16 ... 332 7e-90 UniRef50_C9MVU9 N-acetylmuramoyl-L-alanine amidase domain protei... 321 1e-86 UniRef50_A6UZQ6 N-acetylmuramoyl-L-alanine amidase AmiD n=53 Tax... 319 5e-86 UniRef50_Q3JK19 N-acetylmuramoyl-L-alanine amidase domain protei... 315 1e-84 UniRef50_Q4ZZT4 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 314 1e-84 UniRef50_C7NA60 N-acetylmuramyl-L-alanine amidase, negative regu... 314 3e-84 UniRef50_A5WCW3 N-acetylmuramoyl-L-alanine amidase, family 2 n=5... 311 1e-83 UniRef50_C0YHQ4 Possible N-acetylmuramoyl-L-alanine amidase n=1 ... 308 2e-82 UniRef50_C0QVR5 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Brach... 306 4e-82 UniRef50_A4VRS8 N-acetylmuramoyl-L-alanine amidase family protei... 302 9e-81 UniRef50_C6X3P6 N-acetylmuramoyl-L-alanine amidase n=3 Tax=Bacte... 300 3e-80 UniRef50_A1UW52 N-acetylmuramoyl-L-alanine amidase domain protei... 298 2e-79 UniRef50_C1QGN2 Negative regulator of beta-lactamase expression ... 296 8e-79 UniRef50_A4CAP2 Probable N-acetylmuramoyl-L-alanine amidase n=1 ... 292 8e-78 UniRef50_A4SRC8 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Aerom... 288 1e-76 UniRef50_C7XRK8 Glutaminase n=10 Tax=Fusobacterium RepID=C7XRK8_... 286 5e-76 UniRef50_Q15N79 N-acetylmuramyl-L-alanine amidase, negative regu... 283 4e-75 UniRef50_A9M6A2 Protein ampD n=39 Tax=Proteobacteria RepID=A9M6A... 275 1e-72 UniRef50_UPI00016A62BF N-acetylmuramyl-L-alanine amidase, negati... 273 4e-72 UniRef50_B0T844 N-acetylmuramyl-L-alanine amidase, negative regu... 269 9e-71 UniRef50_B6JBX5 Negative regulator of AmpC, AmpD n=3 Tax=Alphapr... 263 4e-69 UniRef50_Q07PU2 N-acetylmuramyl-L-alanine amidase, negative regu... 256 5e-67 UniRef50_C6QHF6 N-acetylmuramyl-L-alanine amidase, negative regu... 256 6e-67 UniRef50_Q2RVT4 AmpD (Negative regulator of AmpC) n=2 Tax=Rhodos... 255 1e-66 UniRef50_C4SAC3 Negative regulator of beta-lactamase expression ... 254 3e-66 UniRef50_B3ESH1 Putative uncharacterized protein n=1 Tax=Candida... 251 2e-65 UniRef50_Q0BV14 Anhydro-N-acetylmuramyl-tripeptide amidase n=1 T... 249 8e-65 UniRef50_B2IHS0 N-acetylmuramyl-L-alanine amidase, negative regu... 249 9e-65 UniRef50_Q4FPN2 Probable N-acetylmuramoyl-L-alanine amidase n=2 ... 247 3e-64 UniRef50_C6XME2 N-acetylmuramyl-L-alanine amidase, negative regu... 247 3e-64 UniRef50_A5V2C7 N-acetylmuramoyl-L-alanine amidase, family 2 n=6... 244 3e-63 UniRef50_B6BSD7 Probable N-acetylmuramoyl-L-alanine amidase YbjR... 238 2e-61 UniRef50_B6IRH2 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Rhodo... 237 4e-61 UniRef50_A8TR24 Negative regulator of beta-lactamase expression ... 230 4e-59 UniRef50_A3HXI6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Algor... 228 2e-58 UniRef50_A5CBZ0 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Orien... 227 4e-58 UniRef50_Q28T26 Negative regulator of AmpC AmpD n=39 Tax=Rhodoba... 222 1e-56 UniRef50_C6XXC7 N-acetylmuramoyl-L-alanine amidase family 2 n=3 ... 222 1e-56 UniRef50_A5FA27 N-acetylmuramoyl-L-alanine amidase, family 2 n=2... 219 7e-56 UniRef50_C7PRR2 N-acetylmuramyl-L-alanine amidase, negative regu... 215 1e-54 UniRef50_C7D9N0 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=... 211 2e-53 UniRef50_Q2NVA7 Putative N-acetylmuramoyl-L-alanine amidase n=1 ... 207 2e-52 UniRef50_D0CW21 N-acetylmuramyl-L-alanine amidase, negative regu... 200 6e-50 UniRef50_C2G1S0 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Sphin... 197 3e-49 UniRef50_Q0F4W8 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 194 3e-48 UniRef50_UPI0001793312 PREDICTED: hypothetical protein n=1 Tax=A... 194 3e-48 UniRef50_Q3BNF4 N-acetylmuramoyl-L-alanine amidase n=14 Tax=Xant... 191 3e-47 UniRef50_B9NMR2 N-acetylmuramyl-L-alanine amidase, negative regu... 190 4e-47 UniRef50_A3VV46 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Parvu... 183 5e-45 UniRef50_Q1DDM5 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 181 2e-44 UniRef50_A5UR54 N-acetylmuramoyl-L-alanine amidase, family 2 n=2... 175 1e-42 UniRef50_A4W6L1 N-acetylmuramoyl-L-alanine amidase, family 2 n=3... 174 3e-42 UniRef50_Q093H8 Negative regulator of beta-lactamase expression ... 173 4e-42 UniRef50_B3SF77 Putative uncharacterized protein (Fragment) n=1 ... 173 7e-42 UniRef50_B8GD95 N-acetylmuramyl-L-alanine amidase, negative regu... 172 1e-41 UniRef50_C9R6I7 Protein AmpD n=1 Tax=Aggregatibacter actinomycet... 171 2e-41 UniRef50_Q4ZY97 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 170 4e-41 UniRef50_D1WWE1 N-acetylmuramyl-L-alanine amidase, negative regu... 167 3e-40 UniRef50_P13016 1,6-anhydro-N-acetylmuramyl-L-alanine amidase am... 167 4e-40 UniRef50_P82974 1,6-anhydro-N-acetylmuramyl-L-alanine amidase am... 167 4e-40 UniRef50_C7RNH8 N-acetylmuramyl-L-alanine amidase, negative regu... 167 5e-40 UniRef50_C6APP4 Protein AmpD n=8 Tax=Gammaproteobacteria RepID=C... 166 6e-40 UniRef50_D2AU78 N-acetylmuramoyl-L-alanine amidase n=5 Tax=Bacte... 165 2e-39 UniRef50_A1K6E1 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Azoar... 163 4e-39 UniRef50_A4G8Q1 N-acetylmuramoyl-L-alanine amidase n=4 Tax=Burkh... 163 8e-39 UniRef50_B8GT21 N-acetylmuramyl-L-alanine amidase, negative regu... 162 9e-39 UniRef50_B5JVS6 Negative regulator of AmpC, AmpD n=1 Tax=gamma p... 162 1e-38 UniRef50_Q65VN8 AmpD protein n=13 Tax=Gammaproteobacteria RepID=... 161 2e-38 UniRef50_D2AQX4 Negative regulator of beta-lactamase expression-... 160 3e-38 UniRef50_A4A5I4 Anhydro-N-acetylmuramyl-tripeptide amidase n=1 T... 160 3e-38 UniRef50_A8PNB6 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=... 160 4e-38 UniRef50_UPI0000D5333F negative regulator of AmpC, AmpD n=1 Tax=... 160 4e-38 UniRef50_Q0AC58 N-acetylmuramyl-L-alanine amidase, negative regu... 160 4e-38 UniRef50_B2JH28 N-acetylmuramyl-L-alanine amidase, negative regu... 160 4e-38 UniRef50_Q46X31 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 160 4e-38 UniRef50_B4RX52 N-acetylmuramoyl-L-alanine amidase, putative n=2... 160 6e-38 UniRef50_D2BEW5 Negative regulator of beta-lactamase expression-... 158 1e-37 UniRef50_Q12NJ5 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 158 1e-37 UniRef50_C5TMG7 Protein AmpD n=4 Tax=Neisseriaceae RepID=C5TMG7_... 158 2e-37 UniRef50_A1TKH5 N-acetylmuramyl-L-alanine amidase, negative regu... 158 3e-37 UniRef50_A8FQB8 N-acetylmuramyl-L-alanine amidase, negative regu... 157 3e-37 UniRef50_B1XX10 N-acetylmuramyl-L-alanine amidase, negative regu... 157 4e-37 UniRef50_B0VMP8 N-acetyl-anhydromuramyl-L-alanine amidase (Regul... 157 5e-37 UniRef50_A8FVJ2 Negative regulator of beta-lactamase expression-... 157 5e-37 UniRef50_A5WCS6 N-acetylmuramoyl-L-alanine amidase, family 2 n=3... 156 8e-37 UniRef50_D0RN01 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=... 155 1e-36 UniRef50_C8PWQ1 Protein AmpD n=1 Tax=Enhydrobacter aerosaccus SK... 155 1e-36 UniRef50_D0J795 N-acetylmuramyl-L-alanine amidase, negative n=9 ... 155 2e-36 UniRef50_B3QXY2 N-acetylmuramyl-L-alanine amidase, negative regu... 154 3e-36 UniRef50_D1SAT8 N-acetylmuramyl-L-alanine amidase, negative regu... 152 1e-35 UniRef50_B3R6P0 N-acetyl-anhydromuranmyl-L-alanine amidase n=3 T... 151 3e-35 UniRef50_D0LQ75 N-acetylmuramyl-L-alanine amidase, negative regu... 150 5e-35 UniRef50_Q1ARF9 N-acetylmuramyl-L-alanine amidase, negative regu... 148 1e-34 UniRef50_A4SVB0 N-acetylmuramoyl-L-alanine amidase, family 2 n=4... 148 1e-34 UniRef50_A6GR52 Putative anhydro-N-acetylmuramyl-tripeptide amid... 148 1e-34 UniRef50_D1CGY2 N-acetylmuramyl-L-alanine amidase, negative regu... 148 2e-34 UniRef50_A1AXT9 N-acetylmuramyl-L-alanine amidase, negative regu... 145 2e-33 UniRef50_A0L5K2 N-acetylmuramyl-L-alanine amidase, negative regu... 143 7e-33 UniRef50_A6T2C3 Negative regulator of beta-lactamase expression ... 142 1e-32 UniRef50_C4DNA4 Negative regulator of beta-lactamase expression ... 142 2e-32 UniRef50_C0R4G3 N-acetylmuramoyl-L-alanine amidase, family 2 n=9... 140 4e-32 UniRef50_A6GDD4 Putative N-acetylmuramoyl-L-alanine amidase n=1 ... 137 3e-31 UniRef50_Q92IC3 Putative N-acetylmuramoyl-L-alanine amidase RC04... 137 3e-31 UniRef50_Q8ES14 Putative uncharacterized protein OB0830 n=1 Tax=... 137 4e-31 UniRef50_B5HCN0 Secreted protein n=3 Tax=Streptomyces RepID=B5HC... 137 6e-31 UniRef50_B5GAH2 Amidase n=15 Tax=Streptomyces RepID=B5GAH2_9ACTO 136 7e-31 UniRef50_B3QCK8 N-acetylmuramyl-L-alanine amidase, negative regu... 134 3e-30 UniRef50_Q1QZ97 Negative regulator of AmpC, AmpD n=1 Tax=Chromoh... 133 8e-30 UniRef50_B3ZYJ5 N-acetylmuramoyl-L-alanine amidase, putative n=1... 131 3e-29 UniRef50_C9LCL1 N-acetylmuramoyl-L-alanine amidase CwlL n=2 Tax=... 128 2e-28 UniRef50_C5T4Q5 N-acetylmuramyl-L-alanine amidase, negative regu... 128 2e-28 UniRef50_A5GTP3 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Synec... 125 2e-27 UniRef50_B8FYR6 N-acetylmuramyl-L-alanine amidase, negative regu... 124 4e-27 UniRef50_C9Y7L0 1,6-anhydro-N-acetylmuramyl-L-alanine amidase am... 122 1e-26 UniRef50_UPI00016C05EA N-acetylmuramoyl-L-alanine amidase n=1 Ta... 112 1e-23 UniRef50_B6BVD5 N-acetylmuramyl-L-alanine amidase, negative regu... 110 5e-23 UniRef50_A0Q0S8 N-acetylmuramoyl-L-alanine amidase cwlL (Cellwal... 108 3e-22 UniRef50_C0A8M7 Negative regulator of beta-lactamase expression-... 100 1e-19 UniRef50_B2U693 N-acetylmuramoyl-L-alanine amidase family protei... 92 1e-17 Sequences not found previously or not previously below threshold: UniRef50_D2PZI0 N-acetylmuramyl-L-alanine amidase, negative regu... 142 1e-32 UniRef50_C9N2Y5 N-acetylmuramyl-L-alanine amidase, negative regu... 136 8e-31 UniRef50_D1XLT9 N-acetylmuramyl-L-alanine amidase, negative regu... 130 4e-29 UniRef50_A9AXU4 N-acetylmuramyl-L-alanine amidase, negative regu... 129 8e-29 UniRef50_A4WS28 N-acetylmuramoyl-L-alanine amidase, family 2 n=2... 125 1e-27 UniRef50_D2Q0D6 N-acetylmuramyl-L-alanine amidase, negative regu... 124 4e-27 UniRef50_D1X7T3 N-acetylmuramyl-L-alanine amidase, negative regu... 123 6e-27 UniRef50_C0WQZ5 N-acetylmuramyl-L-alanine amidase, negative regu... 121 3e-26 UniRef50_UPI0001B539A2 amidase n=1 Tax=Streptomyces sp. AA4 RepI... 119 9e-26 UniRef50_Q9FC03 Putative secreted amidase n=2 Tax=Streptomyces R... 117 3e-25 UniRef50_A6GHP2 Putative amidase n=1 Tax=Plesiocystis pacifica S... 113 4e-24 UniRef50_P81717 N-acetylmuramoyl-L-alanine amidase A n=1 Tax=Ach... 108 3e-22 UniRef50_B9XDJ7 N-acetylmuramoyl-L-alanine amidase family 2 n=1 ... 106 7e-22 UniRef50_B1TGB7 N-acetylmuramyl-L-alanine amidase, negative regu... 106 8e-22 UniRef50_Q31KQ2 N-acetylmuramoyl-L-alanine amidase, family 2 n=2... 105 2e-21 UniRef50_Q7V7M8 N-acetylmuramoyl-L-alanine amidase (Family 2) n=... 105 2e-21 UniRef50_A3TR75 Putative amidase n=1 Tax=Janibacter sp. HTCC2649... 105 2e-21 UniRef50_D2AX66 Negative regulator of beta-lactamase expression-... 104 3e-21 UniRef50_C4DKK4 Negative regulator of beta-lactamase expression ... 103 5e-21 UniRef50_D2AYL5 Negative regulator of beta-lactamase expression-... 103 6e-21 UniRef50_Q0AY32 Negative regulator of beta-lactamase expression-... 102 1e-20 UniRef50_D1SBP4 N-acetylmuramyl-L-alanine amidase, negative regu... 100 8e-20 UniRef50_C7Q860 N-acetylmuramyl-L-alanine amidase, negative regu... 100 9e-20 UniRef50_B2A1Q6 N-acetylmuramoyl-L-alanine amidase family 2 n=1 ... 99 2e-19 UniRef50_Q2SEW1 Negative regulator of beta-lactamase expression ... 98 2e-19 UniRef50_A9B3J4 N-acetylmuramyl-L-alanine amidase, negative regu... 98 3e-19 UniRef50_C0G0C8 N-acetylmuramyl-L-alanine amidase, negative regu... 98 4e-19 UniRef50_Q3AXW0 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 95 3e-18 UniRef50_Q160K6 N-acetyl-anhydromuramyl-L-alanine amidase, putat... 94 4e-18 UniRef50_B9XDJ6 N-acetylmuramyl-L-alanine amidase, negative regu... 94 6e-18 UniRef50_C7N6M2 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Slack... 91 5e-17 UniRef50_A4TAY9 Peptidoglycan-binding domain 1 protein n=5 Tax=r... 90 6e-17 UniRef50_UPI0001B554B9 secreted amidase n=1 Tax=Streptomyces sp.... 89 2e-16 UniRef50_B6BGC2 B-N-acetylglucosaminidase, glycoside hydrolase f... 88 3e-16 UniRef50_C7UBT6 Sporulation domain-containing protein n=3 Tax=Ba... 88 3e-16 UniRef50_C1MT36 Predicted protein n=1 Tax=Micromonas pusilla CCM... 87 6e-16 UniRef50_B9XPB1 N-acetylmuramyl-L-alanine amidase, negative regu... 87 6e-16 UniRef50_B8HV25 N-acetylmuramyl-L-alanine amidase, negative regu... 86 1e-15 UniRef50_C0QM08 Putative N-acetylmuramoyl-L-alanine amidase AmpD... 86 1e-15 UniRef50_C5RQQ9 N-acetylmuramoyl-L-alanine amidase family 2 n=3 ... 85 2e-15 UniRef50_Q05S34 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 85 2e-15 UniRef50_A5Z412 Putative uncharacterized protein n=1 Tax=Eubacte... 85 3e-15 UniRef50_B1ABI9 Putative uncharacterized protein n=1 Tax=Lactoco... 85 4e-15 UniRef50_A0M513 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Grame... 84 6e-15 UniRef50_A7NJ74 N-acetylmuramyl-L-alanine amidase, negative regu... 83 8e-15 UniRef50_D0LV42 N-acetylmuramyl-L-alanine amidase, negative regu... 83 8e-15 UniRef50_Q5WIB6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Bacil... 82 2e-14 UniRef50_B8HSE7 N-acetylmuramyl-L-alanine amidase, negative regu... 82 2e-14 UniRef50_D0LH65 N-acetylmuramyl-L-alanine amidase, negative regu... 82 2e-14 UniRef50_B9XKL0 N-acetylmuramyl-L-alanine amidase, negative regu... 82 3e-14 UniRef50_A9B2D0 Putative uncharacterized protein n=1 Tax=Herpeto... 82 3e-14 UniRef50_A5IAD5 N-acetylmuramoyl-L-alanine amidase; amidase 2 n=... 82 3e-14 UniRef50_Q8DLW7 Tlr0359 protein n=1 Tax=Thermosynechococcus elon... 81 3e-14 UniRef50_A1UKT0 Peptidoglycan-binding domain 1 protein n=3 Tax=M... 81 3e-14 UniRef50_C7PLI7 Peptidase C14 caspase catalytic subunit p20 n=1 ... 81 5e-14 UniRef50_B4WRE3 N-acetylmuramoyl-L-alanine amidase domain protei... 80 6e-14 UniRef50_C4ZEY9 N-acetylmuramoyl-L-alanine amidase n=3 Tax=Clost... 80 7e-14 UniRef50_B5LGB7 Amidase n=10 Tax=unclassified Siphoviridae RepID... 80 8e-14 UniRef50_A0YR44 AmpD n=3 Tax=Oscillatoriales RepID=A0YR44_9CYAN 80 1e-13 UniRef50_B1V3W0 N-acetylmuramoyl-L-alanine amidase, family 2 n=8... 80 1e-13 UniRef50_A9AWP8 N-acetylmuramyl-L-alanine amidase, negative regu... 79 2e-13 UniRef50_C7GYS0 Putative N-acetylmuramoyl-L-alanine amidase CwlA... 79 2e-13 UniRef50_UPI0001BC309D N-acetylmuramoyl-L-alanine amidase n=1 Ta... 78 2e-13 UniRef50_B2SIS3 N-acetylmuramoyl-L-alanine amidase, putative n=2... 78 2e-13 UniRef50_A5GSJ2 Putative uncharacterized protein SynRCC307_0948 ... 78 3e-13 UniRef50_B0MAX7 Putative uncharacterized protein n=1 Tax=Anaeros... 78 3e-13 UniRef50_C0CQ24 Putative uncharacterized protein n=4 Tax=Clostri... 78 3e-13 UniRef50_A8E261 Putative N-acetylmuramoyl-L-alanine amidase n=1 ... 78 5e-13 UniRef50_A0LPT1 N-acetylmuramyl-L-alanine amidase, negative regu... 77 6e-13 UniRef50_B0C6S0 N-acetyl-anhydromuramyl-L-alanine amidase, putat... 77 6e-13 UniRef50_C7N142 Negative regulator of beta-lactamase expression ... 77 7e-13 UniRef50_C7MM46 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Crypt... 77 8e-13 UniRef50_Q925X1 Lin2374 protein n=2 Tax=Listeria RepID=Q925X1_LISIN 77 9e-13 UniRef50_C3EV93 N-acetylmuramoyl-L-alanine amidase n=11 Tax=Baci... 77 9e-13 UniRef50_Q30PL8 Negative regulator of AmpC, AmpD n=4 Tax=Bacteri... 77 1e-12 UniRef50_B8HPP1 N-acetylmuramyl-L-alanine amidase, negative regu... 76 1e-12 UniRef50_Q9ZX49 Gp29 n=1 Tax=Mycobacterium phage TM4 RepID=Q9ZX4... 76 1e-12 UniRef50_UPI0001C1705F AmpD n=2 Tax=Nostocaceae RepID=UPI0001C1705F 76 1e-12 UniRef50_C4KDJ8 Peptidoglycan-binding domain 1 protein n=1 Tax=T... 76 2e-12 UniRef50_Q331X1 Putative N-acetylmuramoyl-L-alanine amidase n=2 ... 76 2e-12 UniRef50_C0WEF9 Putative uncharacterized protein n=1 Tax=Acidami... 75 2e-12 UniRef50_UPI0001979E35 N-acetylmuramyl-L-alanine amidase, negati... 75 3e-12 UniRef50_Q7NG55 Glr3318 protein n=1 Tax=Gloeobacter violaceus Re... 74 6e-12 UniRef50_D2QH68 N-acetylmuramyl-L-alanine amidase, negative regu... 74 6e-12 UniRef50_Q04T28 Amidase n=4 Tax=Leptospira RepID=Q04T28_LEPBJ 73 9e-12 UniRef50_B1ZXM8 N-acetylmuramyl-L-alanine amidase, negative regu... 73 1e-11 UniRef50_C8RU72 Prophage LambdaSa2, lysin n=1 Tax=Corynebacteriu... 73 1e-11 UniRef50_P36550 N-acetylmuramoyl-L-alanine amidase cwlL n=4 Tax=... 73 1e-11 UniRef50_A1ZRL2 Putative peptidoglycan binding domain protein n=... 72 2e-11 UniRef50_C0Z5F5 Putative N-acetylmuramoyl-L-alanine amidase n=1 ... 72 2e-11 UniRef50_C2BV37 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Mobil... 72 2e-11 UniRef50_A3DJ52 N-acetylmuramyl-L-alanine amidase, negative regu... 72 2e-11 UniRef50_UPI0001693C62 N-acetylmuramoyl-L-alanine amidase, famil... 72 2e-11 UniRef50_A7VR21 Putative uncharacterized protein n=1 Tax=Clostri... 72 3e-11 UniRef50_D0LVX2 Putative uncharacterized protein n=1 Tax=Haliang... 72 3e-11 UniRef50_B9XEI5 N-acetylmuramyl-L-alanine amidase, negative regu... 72 3e-11 UniRef50_C6JDZ2 Putative uncharacterized protein n=1 Tax=Ruminoc... 71 3e-11 UniRef50_A8RYS3 Putative uncharacterized protein n=3 Tax=Clostri... 71 4e-11 UniRef50_D0YV19 Putative amidase n=1 Tax=Mobiluncus mulieris 28-... 71 5e-11 UniRef50_A6CD01 Probable N-acetylmuramoyl-L-alanine amidase n=1 ... 71 5e-11 UniRef50_C9A1B6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Enter... 70 6e-11 UniRef50_C0F005 Putative uncharacterized protein n=1 Tax=Eubacte... 70 6e-11 UniRef50_B2J1Q9 N-acetylmuramoyl-L-alanine amidase, family 2 n=4... 70 9e-11 UniRef50_Q8KD30 N-acetylmuramoyl-L-alanine amidase, putative n=1... 70 1e-10 UniRef50_Q026T4 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 70 1e-10 UniRef50_B4VXL7 Putative peptidoglycan binding domain protein n=... 69 1e-10 UniRef50_C6R9G6 Negative regulator of beta-lactamase expression ... 69 2e-10 UniRef50_B5CSL4 Putative uncharacterized protein n=4 Tax=Clostri... 68 2e-10 UniRef50_C4V1H2 Putative uncharacterized protein n=1 Tax=Selenom... 68 3e-10 UniRef50_B9YE42 Putative uncharacterized protein n=1 Tax=Holdema... 68 3e-10 UniRef50_B0CCH2 N-acetylmuramoyl-L-alanine amidase, putative n=1... 68 3e-10 UniRef50_A3HZ10 Putative uncharacterized protein n=1 Tax=Algorip... 68 3e-10 UniRef50_Q31MV4 N-acetylmuramoyl-L-alanine amidase, family 2 n=3... 68 4e-10 UniRef50_A7G716 N-acetylmuramoyl-L-alanine amidase n=7 Tax=Clost... 68 5e-10 UniRef50_Q5L2J6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Geoba... 67 1e-09 UniRef50_C1A451 Putative amidase n=1 Tax=Gemmatimonas aurantiaca... 66 1e-09 UniRef50_C5PKQ4 Putative uncharacterized protein n=2 Tax=Sphingo... 66 1e-09 UniRef50_C1ZE81 Negative regulator of beta-lactamase expression ... 66 2e-09 UniRef50_B0G3S2 Putative uncharacterized protein n=5 Tax=Clostri... 66 2e-09 UniRef50_D2RJL3 N-acetylmuramyl-L-alanine amidase, negative regu... 65 2e-09 UniRef50_B4AHH5 N-acetylmuramoyl-L-alanine amidase XlyB (Cellwal... 65 2e-09 UniRef50_Q609E7 N-acetylmuramoyl-L-alanine amidase domain/peptid... 65 2e-09 UniRef50_UPI0001BCD943 Peptidoglycan-binding domain 1 protein n=... 65 2e-09 UniRef50_A3DIC1 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clost... 65 3e-09 UniRef50_A5Z605 Putative uncharacterized protein n=1 Tax=Eubacte... 65 3e-09 >UniRef50_P75820 N-acetylmuramoyl-L-alanine amidase amiD n=119 Tax=Enterobacteriaceae RepID=AMID_ECOLI Length = 276 Score = 427 bits (1098), Expect = e-118, Method: Composition-based stats. Identities = 276/276 (100%), Positives = 276/276 (100%) Query: 1 MRRFFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSL 60 MRRFFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSL Sbjct: 1 MRRFFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSL 60 Query: 61 ATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIEL 120 ATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIEL Sbjct: 61 ATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIEL 120 Query: 121 ENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPL 180 ENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPL Sbjct: 121 ENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPL 180 Query: 181 FPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRR 240 FPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRR Sbjct: 181 FPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRR 240 Query: 241 VIMAFQMHFRPTLYNGEADAETQAIAEALLEKYGQD 276 VIMAFQMHFRPTLYNGEADAETQAIAEALLEKYGQD Sbjct: 241 VIMAFQMHFRPTLYNGEADAETQAIAEALLEKYGQD 276 >UniRef50_C5BFW7 N-acetylmuramoyl-L-alanine amidase AmiD n=14 Tax=Enterobacteriaceae RepID=C5BFW7_EDWI9 Length = 294 Score = 363 bits (933), Expect = 3e-99, Method: Composition-based stats. Identities = 137/277 (49%), Positives = 179/277 (64%), Gaps = 4/277 (1%) Query: 1 MRRFFWLVAAALLLAGCAGEKGIVE-KEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSS 59 + + + A +L+ C +E ++GY A RI+ LV+HYTA D SS Sbjct: 13 IEKLVVVTILAFMLSACVRHSDKIEARDGYFASHAFTAVGQNERIRFLVLHYTAVDDVSS 72 Query: 60 LATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIE 119 L LT +QVS+HYL+P P +G+P + QLV E + AWHAGIS+W G + LNDTSIGIE Sbjct: 73 LNILTKEQVSAHYLIPKEPKSIHGQPVVLQLVDENKRAWHAGISSWNGRSGLNDTSIGIE 132 Query: 120 LENRGWQKSA-GVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPG 178 + N G+ + G + + P+ QI A+ LAKDI+ RYHI+P+NVV H+DIAP RK DPG Sbjct: 133 IVNLGYTDNMLGQRTWYPYTEKQIAAVAALAKDIVNRYHIEPDNVVGHSDIAPLRKQDPG 192 Query: 179 PLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKP--DMTPR 236 LFPW+ LA GIGAWPD VN YLA R+PH+PV + + LL +YGYD P + Sbjct: 193 KLFPWEHLAAMGIGAWPDRSTVNKYLADRSPHSPVKVSVIQALLKQYGYDQIPQNGVLDE 252 Query: 237 EQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKY 273 R+ + AFQMHFRP+ +G ADAET+AIA ALLEKY Sbjct: 253 NTRKTVSAFQMHFRPSDISGNADAETEAIARALLEKY 289 >UniRef50_A1V4B3 N-acetylmuramoyl-L-alanine amidase domain protein n=59 Tax=Proteobacteria RepID=A1V4B3_BURMS Length = 314 Score = 353 bits (906), Expect = 4e-96, Method: Composition-based stats. Identities = 143/268 (53%), Positives = 175/268 (65%), Gaps = 1/268 (0%) Query: 7 LVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK 66 L+A+ +LA +V + Y DT A++A RI+ LV+HYT SL LT + Sbjct: 24 LLASFSMLAAACTTPTLVNRGDYYADTSLPARSADSRIRFLVMHYTEIGEAPSLRVLTQE 83 Query: 67 QVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQ 126 VS+HY+VP P G P ++QLVPE E AWHAG+SAW+GAT LN SIGIE NRG Sbjct: 84 NVSAHYVVPDAPRTERGAPVVYQLVPESERAWHAGVSAWQGATELNGVSIGIENVNRGPI 143 Query: 127 KSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQL 186 + + +AP+ PAQ+ A++ LAKDI+ARY I P VV H+DIAPQRK DPGPLFPW+ L Sbjct: 144 DTPHGRMWAPYPPAQVDAIVRLAKDIVARYRIPPTRVVGHSDIAPQRKIDPGPLFPWRAL 203 Query: 187 AQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDM-TPREQRRVIMAF 245 A+ G+GAWPD + V LAGR P + VD L LARYGYDV D RRV AF Sbjct: 204 AKAGVGAWPDDETVAARLAGRPPKSLVDVRELQLKLARYGYDVATDGVLDDRTRRVFSAF 263 Query: 246 QMHFRPTLYNGEADAETQAIAEALLEKY 273 QMHFRPT Y G DAET AIA+ALL+KY Sbjct: 264 QMHFRPTDYAGNPDAETDAIAQALLDKY 291 >UniRef50_A7FHD3 N-acetylmuramoyl-L-alanine amidase, family 2 n=28 Tax=Enterobacteriaceae RepID=A7FHD3_YERP3 Length = 283 Score = 352 bits (904), Expect = 6e-96, Method: Composition-based stats. Identities = 121/256 (47%), Positives = 166/256 (64%), Gaps = 1/256 (0%) Query: 19 GEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVP 78 ++++ YQ+DT + A R++ LV+HYTA D SL LT +VS+HYL+P P Sbjct: 23 SSNELIDRGAYQIDTHYPSVAKNERVRFLVLHYTAVDDAESLRLLTQGEVSAHYLIPTHP 82 Query: 79 PRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFE 138 + GK QLVPE + AWHAG+S+W+G LNDTSIGIE+ N G+ + + + P+ Sbjct: 83 KKAGGKAIALQLVPEAQRAWHAGVSSWQGRNNLNDTSIGIEIVNLGFTEKMLGRTWYPYN 142 Query: 139 PAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQ 198 +QI+ + L KDI+ RY+I P +VVAH+DIAP RK DPGPLFPW++LA++G+GAWPD Sbjct: 143 ESQIELIEQLTKDIVQRYNISPSDVVAHSDIAPLRKSDPGPLFPWKRLAEKGVGAWPDDA 202 Query: 199 RVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDM-TPREQRRVIMAFQMHFRPTLYNGE 257 V Y+ GR A + + LA YGY + + E R+VI AFQMHFRP ++G Sbjct: 203 TVAKYIGGRDKKGAASVAVIQQALAAYGYKIPQNGQLDTETRQVIKAFQMHFRPQDFSGV 262 Query: 258 ADAETQAIAEALLEKY 273 D ET+AIA AL+EKY Sbjct: 263 PDVETEAIALALVEKY 278 >UniRef50_D1P770 N-acetylmuramoyl-L-alanine amidase, family 2 n=3 Tax=Providencia RepID=D1P770_9ENTR Length = 295 Score = 348 bits (894), Expect = 9e-95, Method: Composition-based stats. Identities = 134/275 (48%), Positives = 167/275 (60%), Gaps = 6/275 (2%) Query: 1 MRRFFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSL 60 M R W ++ LL GC+ K GY LD ++ RI+ +V+HYT D S+ Sbjct: 1 MYRAIW-ISIIFLLVGCSTTP---SKTGYFLDQSHPSRNTSERIQYIVLHYTVSDDAHSI 56 Query: 61 ATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIEL 120 LT +VSSHYL+P+ P + NG+P I QLVPE+ AWHAG S W+ LND SIGIE+ Sbjct: 57 KILTKGKVSSHYLIPSQPEQKNGQPVILQLVPERLKAWHAGDSRWQYHHSLNDNSIGIEI 116 Query: 121 ENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPL 180 N G + G + PF +QI ALIPL DI+ RY I PENV+ H+DIAP RK DPG Sbjct: 117 VNEGLVRKNGQDIWQPFNDSQIDALIPLLSDIMQRYGIPPENVIGHSDIAPLRKQDPGRA 176 Query: 181 FPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKP--DMTPREQ 238 FPWQ LA GIGAWPD Q V +LAGR + P + L + L YGY P E Sbjct: 177 FPWQALALHGIGAWPDPQTVTKHLAGRQVNAPANVLRLQKALKFYGYAGIPQTGKLDAET 236 Query: 239 RRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKY 273 +R + AFQ+HFRP +G ADAET+AIA AL+EKY Sbjct: 237 KRTLRAFQLHFRPRDIDGLADAETEAIALALIEKY 271 >UniRef50_Q1QX12 Negative regulator of AmpC, AmpD n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QX12_CHRSD Length = 303 Score = 334 bits (856), Expect = 2e-90, Method: Composition-based stats. Identities = 123/271 (45%), Positives = 157/271 (57%), Gaps = 9/271 (3%) Query: 4 FFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATL 63 + W + L L CA + ++GYQ+D R A R++ LV+HYT D SL+TL Sbjct: 25 WLWAMPCLLALTACAA-PTLETRDGYQVDRRYTAPGQSSRVRHLVLHYTDSDARRSLSTL 83 Query: 64 TDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENR 123 T VS+HY++ P+I+QLV E AWHAG SAW T LNDTSIGIE+ NR Sbjct: 84 TGPHVSAHYVLTREA------PKIYQLVDESRRAWHAGASAWHSRTNLNDTSIGIEVVNR 137 Query: 124 GWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPW 183 G ++ + + P+ AQI LI LA+DI+AR+ I P +VV HADIAP+RK DPGP FPW Sbjct: 138 GPYQTPAGRAWTPYPSAQIDTLIALARDIVARHAIDPVDVVGHADIAPRRKIDPGPRFPW 197 Query: 184 QQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVK-PDMTPREQRRVI 242 +L + GIGAWP+ RV Y R +P LA YGY V + Sbjct: 198 YRLYRAGIGAWPETARVMAY-QRRFMASPPSLTQWQRALAAYGYPVAVTGRFDALTHDTL 256 Query: 243 MAFQMHFRPTLYNGEADAETQAIAEALLEKY 273 AFQMHFRPT ++G DA + AI ALLEKY Sbjct: 257 RAFQMHFRPTRHDGFPDAHSAAILWALLEKY 287 >UniRef50_A9KGI9 Anhydro-N-acetylmuramyl-tripeptide amidase n=16 Tax=Proteobacteria RepID=A9KGI9_COXBN Length = 257 Score = 332 bits (852), Expect = 7e-90, Method: Composition-based stats. Identities = 115/249 (46%), Positives = 159/249 (63%), Gaps = 6/249 (2%) Query: 28 GYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK--QVSSHYLVPAVPPRYNGKP 85 Y+++ A+ RI+ LV+HYTA +F+ SL LT + VS HYL+P +GK Sbjct: 2 TYEINLNYPAKNFDKRIRFLVLHYTAKNFEDSLEILTQEAFGVSGHYLIPES--SIDGKK 59 Query: 86 RIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQAL 145 +I+QLVPE+ AWHAG+SAW+G LNDTSIGIE+ N G+Q+ + + PF QI+ + Sbjct: 60 QIFQLVPEKHRAWHAGVSAWQGRIHLNDTSIGIEIVNLGYQEEGEKRRWFPFLDYQIELI 119 Query: 146 IPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLA 205 I LAKDII RY + P VV H+DI+P+RK DPGPLFPW++L +QGIGAW + + + Sbjct: 120 IELAKDIIERYQLHPTCVVGHSDISPERKADPGPLFPWKKLYEQGIGAWYEDE-CKKEME 178 Query: 206 GRAPHTPVDTASLLELLARYGYDVKPDM-TPREQRRVIMAFQMHFRPTLYNGEADAETQA 264 R + D L L YGY ++ ++ ++V+ AFQMHFRPT Y+G D ET A Sbjct: 179 RRLSNETTDIRWLQRHLKTYGYSIEETGELDKKTQQVVCAFQMHFRPTDYSGIPDKETYA 238 Query: 265 IAEALLEKY 273 I AL++KY Sbjct: 239 ILYALVKKY 247 >UniRef50_C9MVU9 N-acetylmuramoyl-L-alanine amidase domain protein n=2 Tax=Leptotrichia RepID=C9MVU9_9FUSO Length = 322 Score = 321 bits (823), Expect = 1e-86, Method: Composition-based stats. Identities = 97/266 (36%), Positives = 147/266 (55%), Gaps = 13/266 (4%) Query: 14 LAGCAGEKGIVEKEG-YQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHY 72 ++G G + I G +D+ ++ R + +++HYTA D D SL LT+ +VS+HY Sbjct: 65 VSGRGGMQTIRNSAGSITVDSSYSSKGQNYRQRFIILHYTAMDRDGSLRALTNNEVSAHY 124 Query: 73 LVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVK 132 L+ ++ LV E AWHAG S W+ + LND+SIGIE+ N G + Sbjct: 125 LISNQKNDP-----VFYLVDENRRAWHAGASEWKTSKNLNDSSIGIEIVNSGNVSGS--- 176 Query: 133 YFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQ-GI 191 F PF QI+ + L K + +Y I N++ H+DIAPQRK DPGPLFPW++L ++ I Sbjct: 177 -FEPFRDFQIKDVAVLVKYLADKYEIPATNILGHSDIAPQRKPDPGPLFPWEELYRKYNI 235 Query: 192 GAWPDAQRVNFYLAGRA-PHTPVDTASLLELLARYGYDVKPDM-TPREQRRVIMAFQMHF 249 G W D R + + + + A++ L+++GY + + + VI FQ HF Sbjct: 236 GMWYDNDRKSAFENEYSLSWASLPAATVQAELSKFGYSISTTGRWDEQTKNVIKVFQYHF 295 Query: 250 RPTLYNGEADAETQAIAEALLEKYGQ 275 RP+ Y+G+ D ET AI +AL EKY + Sbjct: 296 RPSKYDGKLDLETYAILKALNEKYNK 321 >UniRef50_A6UZQ6 N-acetylmuramoyl-L-alanine amidase AmiD n=53 Tax=Proteobacteria RepID=A6UZQ6_PSEA7 Length = 291 Score = 319 bits (819), Expect = 5e-86, Method: Composition-based stats. Identities = 116/287 (40%), Positives = 155/287 (54%), Gaps = 18/287 (6%) Query: 5 FWLVAAALLLAGCAGEKGIVEKEGY-----------QLDTRRQAQAAYPRIKVLVIHYTA 53 ++A AL LAGC + + + ++ R + A R++ LV+HYTA Sbjct: 6 LCVLACALGLAGCLQGAVVERPDAHGETLAPPPLAIDYNSYRTSAAYNKRVRYLVLHYTA 65 Query: 54 DDFDSSLATLTDKQVSSHYLVPAVPPRYNG-----KPRIWQLVPEQELAWHAGISAWRGA 108 DF S+ LT S+HYLVP+ RI+ LV E + AWHAG+S+W G Sbjct: 66 LDFSRSVEMLTRGPGSAHYLVPSPADASYRRAGFSGQRIFNLVDENDRAWHAGVSSWGGR 125 Query: 109 TRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYH-IKPENVVAHA 167 LND+SIGIE+ N GV F +EP+QI+AL LA++I+ RY I P++V+ H+ Sbjct: 126 EGLNDSSIGIEIVNLARDDD-GVFTFPDYEPSQIEALRQLARNILQRYPDISPKHVLGHS 184 Query: 168 DIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGY 227 DIA RK DPGP PW++L GIGAW D + Y A A LE L RYGY Sbjct: 185 DIAVGRKSDPGPKLPWKELHDAGIGAWYDDATRDRYQARFERDGLPSRAEWLEALRRYGY 244 Query: 228 DVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKYG 274 V + ++ AFQMHFRP ++G ADAET AI AL E+Y Sbjct: 245 AVPERGNDEDFANLLRAFQMHFRPDNHDGVADAETAAILYALNERYS 291 >UniRef50_Q3JK19 N-acetylmuramoyl-L-alanine amidase domain protein n=8 Tax=Proteobacteria RepID=Q3JK19_BURP1 Length = 454 Score = 315 bits (807), Expect = 1e-84, Method: Composition-based stats. Identities = 119/293 (40%), Positives = 163/293 (55%), Gaps = 24/293 (8%) Query: 2 RRFFWLVAAALL-LAGCAGEKGIVEKE-----------GYQLDTRRQAQAAYPRIKVLVI 49 R W V +L LAGC G+V GY +D Q+ R++ LV+ Sbjct: 130 RSSAWPVGMLMLPLAGCGDGDGVVPSAHAQDTPPPSGAGYTIDRSIQSPNQDSRVRTLVL 189 Query: 50 HYTADDFDSSLATLT--DKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRG 107 HYTA S+A+LT +QVS+HYLVP + ++++LVP+ AWHAG+S W+G Sbjct: 190 HYTAQTLADSIASLTSPQRQVSAHYLVPDAAD-DGRRFKVFELVPQARRAWHAGVSYWQG 248 Query: 108 ATRLNDTSIGIELENRGWQKSAGV-----KYFAPFEPAQIQALIPLAKDIIARYHIKPEN 162 LN S+GIE+ N G+ + + P+ AQ+ LA D++A++ + P Sbjct: 249 DRMLNAGSVGIEIVNLGFPPEDENLPLMNRRWYPYPDAQVAVFGALAADVVAQHQVLPHK 308 Query: 163 VVAHADIAPQRKDDPGPLFPWQQLA-QQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLEL 221 VV H+D+AP RK DPGPLFPW++L Q IGAWP+A+ V++Y R D ASL Sbjct: 309 VVGHSDVAPGRKTDPGPLFPWKKLYDQYKIGAWPEAEAVDYYRVNRPFAG--DVASLQSK 366 Query: 222 LARYGYDVKPDMT-PREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKY 273 L YGYD T + V+ AFQMHFRP+ Y+G D ET AI +ALLEKY Sbjct: 367 LLAYGYDTPQTGTLDAQTVNVVSAFQMHFRPSRYDGVPDVETVAILDALLEKY 419 >UniRef50_Q4ZZT4 N-acetylmuramoyl-L-alanine amidase, family 2 n=10 Tax=Pseudomonas RepID=Q4ZZT4_PSEU2 Length = 283 Score = 314 bits (806), Expect = 1e-84, Method: Composition-based stats. Identities = 105/263 (39%), Positives = 151/263 (57%), Gaps = 15/263 (5%) Query: 10 AALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVS 69 LLL CA G +LDT + R + +V+HYT+ + SL LT +VS Sbjct: 33 LMLLLTACA--------SGPRLDTSHPSVNFDGRAQYVVMHYTSTSLEHSLQLLTHGEVS 84 Query: 70 SHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSA 129 +HYL+ + K I++LV E AWHAG S W G T LN +SIGIE+ N G++++ Sbjct: 85 AHYLIGD-----DSKATIYKLVDENARAWHAGESEWEGRTWLNSSSIGIEIVNPGFKETP 139 Query: 130 GVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQ 189 + + P+ AQ Q++I L KDI+ R I P++++ H+DIAP RK DPGPLFPW++LA + Sbjct: 140 TGRLWYPYTEAQTQSIIVLLKDIVKRNRIDPKHIIGHSDIAPLRKQDPGPLFPWKRLAAE 199 Query: 190 GIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDM-TPREQRRVIMAFQMH 248 G+G WPD ++V A A + P + LAR GY R+V+ AFQMH Sbjct: 200 GLGNWPDERQVAQRQALLATNLPS-ITWFQQQLARLGYSTPQTGELDVATRQVLAAFQMH 258 Query: 249 FRPTLYNGEADAETQAIAEALLE 271 +RP ++GE DA++ AI + L Sbjct: 259 YRPARFDGEPDAQSAAILQVLNH 281 >UniRef50_C7NA60 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=3 Tax=Fusobacteriaceae RepID=C7NA60_LEPBD Length = 316 Score = 314 bits (804), Expect = 3e-84, Method: Composition-based stats. Identities = 96/261 (36%), Positives = 141/261 (54%), Gaps = 12/261 (4%) Query: 18 AGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAV 77 E +D+ ++ R + +++HYTA + D SL LT VSSHYLV Sbjct: 65 GTETISNSAGSITVDSSYTSKGQNYRQRFIILHYTAVNRDGSLRALTGNDVSSHYLVSDQ 124 Query: 78 PPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPF 137 ++ LV E + AWHAG S W+ LND+SIGIE+ N G F PF Sbjct: 125 KNDP-----VFYLVDENKRAWHAGASEWKTTKNLNDSSIGIEIVNNGDVSG----RFEPF 175 Query: 138 EPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQL-AQQGIGAWPD 196 + QI+ + L + +I +Y I P N++ H+DIAPQRK DPGPLFPW++L + IG W D Sbjct: 176 KDFQIKEVAVLVRHLIDKYEIPPTNILGHSDIAPQRKPDPGPLFPWEELNKKYNIGMWYD 235 Query: 197 AQRVNFYLAGRA-PHTPVDTASLLELLARYGYDVKPDM-TPREQRRVIMAFQMHFRPTLY 254 + + Y + A + A++ +++GY V + + +I AFQ HFRP+ Y Sbjct: 236 SSSKSMYESQYASTWDTIPAATVQAEFSKFGYAVNQTGRWDEQTKNIIKAFQYHFRPSKY 295 Query: 255 NGEADAETQAIAEALLEKYGQ 275 +G+ D ET AI +AL +KY + Sbjct: 296 DGKLDLETYAILKALNDKYNK 316 >UniRef50_A5WCW3 N-acetylmuramoyl-L-alanine amidase, family 2 n=5 Tax=Bacteria RepID=A5WCW3_PSYWF Length = 308 Score = 311 bits (798), Expect = 1e-83, Method: Composition-based stats. Identities = 107/284 (37%), Positives = 157/284 (55%), Gaps = 25/284 (8%) Query: 5 FWLVAAALLLAGCAGEKGIVEKEGYQLDTR-RQAQAAYPRIKVLVIHYTADDFDSSLATL 63 L A +L L+GC G + Y +D++ QAQ RIK +V+HYTA++ SL L Sbjct: 31 ISLAAVSLTLSGCMG----LPATTYAIDSQSYQAQGKSQRIKYIVLHYTAENEPESLRIL 86 Query: 64 TDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENR 123 T VS+HYL+P I+QLVP+ + AWHAG ++ G + LNDTSIGIE+ N Sbjct: 87 TTANVSAHYLIP-----ITDDKPIYQLVPDNQRAWHAGQGSFAGRSILNDTSIGIEIVNE 141 Query: 124 GWQK------------SAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAP 171 G Q+ +++ F QI+ + L +D+ +Y I+P ++ H+D+AP Sbjct: 142 GIQQQFRKAKNTDNDGYHPAEHYVEFTDIQIKKIAQLVQDLAQKYEIEPTLIIGHSDMAP 201 Query: 172 QRKDDPGPLFPWQQLAQQ-GIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVK 230 RK DPG FPW++L ++ GIGAW + ++ A + ++L+ YGYD+ Sbjct: 202 SRKIDPGAKFPWERLYKEYGIGAWYEEADKQQFMTE-GSFQSATVADIQQMLSDYGYDIT 260 Query: 231 P-DMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKY 273 P D R R V+ AFQ+HFRP G+ D ET AI +AL +KY Sbjct: 261 PSDEWDRSSRNVVYAFQLHFRPQKLTGQMDLETYAILKALNKKY 304 >UniRef50_C0YHQ4 Possible N-acetylmuramoyl-L-alanine amidase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YHQ4_9FLAO Length = 319 Score = 308 bits (788), Expect = 2e-82, Method: Composition-based stats. Identities = 107/257 (41%), Positives = 145/257 (56%), Gaps = 15/257 (5%) Query: 27 EGYQL-DTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKP 85 GY++ T A A R + L++HYTA D S+ LT + VS+HYLV G Sbjct: 65 AGYKVVKTYFPAIAQNFRQRYLILHYTALPDDKSITVLTQQAVSAHYLVNNT-----GDN 119 Query: 86 RIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSA-GVKYFAPFEPAQIQA 144 I+QLV E + ++HAG+SAWR LNDTSIGIE+ N G+ A G + FAPF Q++ Sbjct: 120 EIYQLVDENKRSYHAGVSAWRNDKNLNDTSIGIEIVNTGYTTDATGKRTFAPFSDDQVKK 179 Query: 145 LIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLA-QQGIGAWPDAQRVNFY 203 + L KDI+ RY I+P NV+ H+DIAP RK DPGP+FPW++L + IG W D Y Sbjct: 180 VAALVKDIVTRYQIQPTNVLGHSDIAPTRKQDPGPMFPWKKLYDEYQIGMWYDEAAKQTY 239 Query: 204 LAGRAP------HTPVDTASLLELLARYGYDVKPDM-TPREQRRVIMAFQMHFRPTLYNG 256 L + P + L ++GY + + ++ I AFQ HFRP Y+G Sbjct: 240 LEAAQADITAKYNEPGFIFLIQTSLQKFGYALDSNGQWDDATKKTIEAFQYHFRPQNYDG 299 Query: 257 EADAETQAIAEALLEKY 273 DAET AI +AL +KY Sbjct: 300 IMDAETWAILQALNQKY 316 >UniRef50_C0QVR5 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QVR5_BRAHW Length = 342 Score = 306 bits (785), Expect = 4e-82, Method: Composition-based stats. Identities = 99/297 (33%), Positives = 149/297 (50%), Gaps = 33/297 (11%) Query: 3 RFFWLVAAALLLAGCAGE---KGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSS 59 RF +L+A L++ C E K ++ + ++ A RIK +++HYTA + D S Sbjct: 6 RFIYLLAVILVITSCNDENITPIRTRKIAPKVSSAFKSPAYNLRIKYIILHYTALNDDLS 65 Query: 60 LATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIE 119 LTD VS+HYL+ I++LV + + AWHAGI+ + +NDTSIGIE Sbjct: 66 FKVLTDPGVSAHYLITTR-----EDEPIYKLVDDNDRAWHAGITMFDNRHSMNDTSIGIE 120 Query: 120 LENRGWQKSAGVKY---------------------FAPFEPAQIQALIPLAKDIIARYHI 158 + N G+ + Y + FE +QI + L K++I +Y I Sbjct: 121 IVNLGFLQKVTNTYEDLRRMTKKQREELFFIPYDEYIEFEDSQIDKVAYLLKELIEKYGI 180 Query: 159 KPENVVAHADIAPQRKDDPGPLFPWQQLA-QQGIGAWPDAQRVNFYLAGRAPHTPVDTAS 217 KP N++ H+DIAP RK DPGP FPW++L + +G W D + +L + Sbjct: 181 KPYNILGHSDIAPYRKKDPGPKFPWKRLYDEYNLGIWYDEYDYSNFLNDN-EYRKAKVMD 239 Query: 218 LLELLARYGYDVKP--DMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEK 272 + E +YGY P ++ + R+V+ AFQ HFRP +G D ET A+ AL K Sbjct: 240 IKEEFIKYGYTSMPTNNVWDFDSRKVLYAFQCHFRPEKIDGNIDNETYAVIRALNLK 296 >UniRef50_A4VRS8 N-acetylmuramoyl-L-alanine amidase family protein n=19 Tax=Proteobacteria RepID=A4VRS8_PSEU5 Length = 262 Score = 302 bits (773), Expect = 9e-81, Method: Composition-based stats. Identities = 111/252 (44%), Positives = 151/252 (59%), Gaps = 8/252 (3%) Query: 26 KEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKP 85 G ++DT + R++ +V+HYT+ D SL L+ + VSSHYL+ P Sbjct: 17 ASGPRIDTSHSSIGHDSRVQFIVLHYTSTDLPRSLELLSGRDVSSHYLIGESPA------ 70 Query: 86 RIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSA-GVKYFAPFEPAQIQA 144 I++LV E AWHAG S W G T LN TSIGIEL N+G+++SA G + + P+ AQI A Sbjct: 71 TIYRLVDEDRRAWHAGESEWNGRTWLNATSIGIELVNQGYEQSADGRRLWYPYSQAQIDA 130 Query: 145 LIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYL 204 L+ L KDI+AR+ +KP ++ H+DIAPQRK DPGPLFPW++LA++G+ WPDA V Sbjct: 131 LVVLLKDIMARHGLKPGAIIGHSDIAPQRKVDPGPLFPWKRLAEEGLVPWPDAGAVAAAQ 190 Query: 205 AGRAPHTPVDTASLLELLARYGYDVK-PDMTPREQRRVIMAFQMHFRPTLYNGEADAETQ 263 A A E LA GY V E R VI AFQM +RPT ++GE DAET Sbjct: 191 AHYAAAGLPAIGWFQEALAAQGYRVPRHGHLDDETRNVIAAFQMKYRPTRFDGEPDAETA 250 Query: 264 AIAEALLEKYGQ 275 A+ + L+ + + Sbjct: 251 AMLQVLVAQASR 262 >UniRef50_C6X3P6 N-acetylmuramoyl-L-alanine amidase n=3 Tax=Bacteria RepID=C6X3P6_FLAB3 Length = 342 Score = 300 bits (769), Expect = 3e-80, Method: Composition-based stats. Identities = 110/260 (42%), Positives = 148/260 (56%), Gaps = 16/260 (6%) Query: 25 EKEGYQL-DTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNG 83 +GY++ T A A R K +++HYTA D D S+ LT + VSSHYLV + G Sbjct: 85 NPQGYRVVKTFFPAVAQNFRQKYIILHYTALDDDKSVMVLTQQSVSSHYLVNNL-----G 139 Query: 84 KPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGW-QKSAGVKYFAPFEPAQI 142 I+QLV E + ++HAGIS WR + LNDTSIGIE+ N G+ S GVK F F+ Q+ Sbjct: 140 DREIYQLVDENKRSYHAGISTWRNDSMLNDTSIGIEIVNAGYVTDSTGVKIFPGFDEGQV 199 Query: 143 QALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLA-QQGIGAWPDAQRVN 201 + + L KDI RY I P N++AH+DIAP RK DPGP FPW++L + IG W D Sbjct: 200 KKVAALVKDIAGRYMIPPTNILAHSDIAPTRKQDPGPKFPWKKLYDEYQIGMWYDESAKQ 259 Query: 202 FYLAGRAPHTPVDTASLLELLARY-------GYDVKPDM-TPREQRRVIMAFQMHFRPTL 253 +L P A+ + + RY GY ++ ++ I AFQ HFRP + Sbjct: 260 NFLNQLTPEQFSAQAAESDFIYRYQLALKNLGYGLEASGRIDDSTKKTIEAFQYHFRPEI 319 Query: 254 YNGEADAETQAIAEALLEKY 273 YNG DAE+ AI +AL +KY Sbjct: 320 YNGVMDAESWAILQALNQKY 339 >UniRef50_A1UW52 N-acetylmuramoyl-L-alanine amidase domain protein n=62 Tax=Proteobacteria RepID=A1UW52_BURMS Length = 341 Score = 298 bits (763), Expect = 2e-79, Method: Composition-based stats. Identities = 115/265 (43%), Positives = 147/265 (55%), Gaps = 12/265 (4%) Query: 18 AGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTD--KQVSSHYLVP 75 + + +D + R++ LV+HYTA S+A LTD + VS+HYLVP Sbjct: 46 GKPRDASGAQDVAIDASIASPNQDSRVRTLVLHYTAQTLARSVALLTDPARPVSAHYLVP 105 Query: 76 AVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGV---- 131 R++ LVPE AWHAG+S W+G LN +SIG+E+ N G+ + Sbjct: 106 DAADA-GTLFRVYALVPETNRAWHAGVSYWQGERLLNASSIGVEIVNTGFPDADENAPLM 164 Query: 132 -KYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLA-QQ 189 + +APF AQ+ + LA DI AR+ I P+ VV H+DIAP RK DPGPLFPW+ L Q Sbjct: 165 RRRWAPFPDAQMAVVGRLAADIAARHEIPPQKVVGHSDIAPGRKLDPGPLFPWRMLHEQY 224 Query: 190 GIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDM-TPREQRRVIMAFQMH 248 G+GAWPDA V +Y A R D A L L YGYD VI AFQMH Sbjct: 225 GVGAWPDAIAVEYYRACRPFRG--DIAELQAKLLAYGYDTPQTGVLDLRTTDVIAAFQMH 282 Query: 249 FRPTLYNGEADAETQAIAEALLEKY 273 FRP Y+G DAET AI +ALL+KY Sbjct: 283 FRPARYDGVPDAETVAILDALLDKY 307 >UniRef50_C1QGN2 Negative regulator of beta-lactamase expression n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QGN2_9SPIR Length = 344 Score = 296 bits (757), Expect = 8e-79, Method: Composition-based stats. Identities = 95/295 (32%), Positives = 145/295 (49%), Gaps = 33/295 (11%) Query: 5 FWLVAAALLLAGCAGE---KGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLA 61 + +AL+L C K ++ T ++ A RIK +++HYTA D D SL Sbjct: 8 ILFLISALVLFSCNDNTSAPIRSRKIAPKISTVFKSPAYNLRIKYIILHYTALDDDLSLK 67 Query: 62 TLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELE 121 LTD VS+HYL+ I++LV + AWHAG++ + +NDTSIGIE+ Sbjct: 68 VLTDPGVSAHYLITTRENDP-----IYKLVDDNNRAWHAGVTMFDNRLTMNDTSIGIEIV 122 Query: 122 NRGWQKSAGV---------------------KYFAPFEPAQIQALIPLAKDIIARYHIKP 160 N G+ + + + +QIQ ++ L +++I +Y +KP Sbjct: 123 NLGFLEKVTNTQEQLRRMTKRERENLFFIPYDEYLEYNESQIQKVVYLLRNLIDKYGVKP 182 Query: 161 ENVVAHADIAPQRKDDPGPLFPWQQLA-QQGIGAWPDAQRVNFYLAGRAPHTPVDTASLL 219 N++ H+DIAP RK DPGP FPW++L + +G W D +L + + Sbjct: 183 YNILGHSDIAPYRKKDPGPKFPWKRLHDEYNLGMWYDEYDYTNFLNDN-EYKKAKVLDIK 241 Query: 220 ELLARYGYDVKP--DMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEK 272 E +YGY P ++ + R+V+ AFQ HFRP +G D E+ AI AL EK Sbjct: 242 EEFVKYGYTSMPTNNIWDFDSRKVLYAFQCHFRPEKIDGNIDNESYAIIRALNEK 296 >UniRef50_A4CAP2 Probable N-acetylmuramoyl-L-alanine amidase n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CAP2_9GAMM Length = 303 Score = 292 bits (748), Expect = 8e-78, Method: Composition-based stats. Identities = 101/294 (34%), Positives = 143/294 (48%), Gaps = 31/294 (10%) Query: 1 MRRFFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSL 60 M + L+ L L+ C + T+ +++ RI+ LV+HYT D+ SL Sbjct: 1 MFKKAMLLPLMLGLSAC----------SQTVSTQFRSENYNSRIRFLVMHYTTGDWQDSL 50 Query: 61 ATLTDKQVSSHYLVPAVPPRYNGKPR--IWQLVPEQELAWHAGISAWRGATRLNDTSIGI 118 LT +VSSHYL+P K +++LV EQ AWHAG+S W+G + +ND SIGI Sbjct: 51 QALTKGEVSSHYLIPEQGDASYPKSHLAVYRLVDEQHRAWHAGVSHWQGRSNINDQSIGI 110 Query: 119 ELENRG-----------------WQKSAGVKYFAPFEPAQIQALIPLAKDIIARYH-IKP 160 EL NR + + + F+ QIQ LI L+KDI+AR I P Sbjct: 111 ELINRAACAHQPQVLTEIAPSAAFFDNQTFCQYPNFDLQQIQLLIELSKDILARNPDIDP 170 Query: 161 ENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLE 220 VV H+DI K DPGP FPW L Q GIGAW + + + A + Sbjct: 171 TAVVGHSDIQLGNKQDPGPHFPWYTLYQHGIGAWYEHATASDHWQALLTEGLPTVAQVQC 230 Query: 221 LLARYGYDVKPDM-TPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKY 273 L +YGY ++ ++ + AFQ+HF P GE +T A+ AL++KY Sbjct: 231 NLQKYGYGIEITGEFDKQTFNTVKAFQLHFLPWQATGEITIKTVAVLFALMDKY 284 >UniRef50_A4SRC8 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Aeromonas RepID=A4SRC8_AERS4 Length = 273 Score = 288 bits (738), Expect = 1e-76, Method: Composition-based stats. Identities = 110/254 (43%), Positives = 150/254 (59%), Gaps = 13/254 (5%) Query: 29 YQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK--QVSSHYLVPAVPPRYNGKPR 86 YQL +R + + RI L++HYT +D SL LT+ QVS+HYL+P + Sbjct: 22 YQLSSRYPSASQNERIAFLILHYTDEDDAHSLRLLTEPAHQVSAHYLIPRDTDQT--PLP 79 Query: 87 IWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKS-----AGVKYFAPFEPAQ 141 ++QLVP+ + AWHAG S W LN +SIGIE+ N G+ A + + P+ AQ Sbjct: 80 VYQLVPDSQRAWHAGRSRWHQYAGLNASSIGIEIVNLGYPPEDALLPAHQRRWQPYTQAQ 139 Query: 142 IQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLA-QQGIGAWPDAQRV 200 I A+ L + ++ RY I P V+AH+D+AP+RK DPGP FPW++LA G+GAWPD RV Sbjct: 140 IAAIGALTQKLVQRYRIPPTQVLAHSDVAPERKQDPGPHFPWRELALHYGVGAWPDEARV 199 Query: 201 NFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQ-RRVIMAFQMHFRPTLYNGEAD 259 AP + + + LARYGY V T EQ R + AFQ+HFRP L +GE D Sbjct: 200 TALRQQPAPA--WNALTWQQQLARYGYGVALSSTWDEQSRAALRAFQLHFRPALISGEPD 257 Query: 260 AETQAIAEALLEKY 273 ++QAI ALLE+Y Sbjct: 258 EQSQAILTALLERY 271 >UniRef50_C7XRK8 Glutaminase n=10 Tax=Fusobacterium RepID=C7XRK8_9FUSO Length = 301 Score = 286 bits (732), Expect = 5e-76, Method: Composition-based stats. Identities = 93/305 (30%), Positives = 149/305 (48%), Gaps = 38/305 (12%) Query: 1 MRRFFWLVAAALLLAGCAGEKGIVEKEGYQLD----------------------TRRQAQ 38 M++ ++ L+ C+ + + ++ A Sbjct: 1 MKKILAFISLLFLMVACSSTEDVKSSGNRNINRGSNISRSQTTIRNIGKFQVDSNSYVAT 60 Query: 39 AAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAW 98 R++ +++HYTA D S+ LT +VSSH+LV +I+ LVP ++ AW Sbjct: 61 GKNERVQFIILHYTATDNLGSIKELTSSRVSSHFLVLDED-----DNKIYNLVPLEQRAW 115 Query: 99 HAGISAWRGATRLNDTSIGIELENRGWQKS--------AGVKYFAPFEPAQIQALIPLAK 150 HAG SA+RG T +NDTS+GIE+ + G K ++ ++P QI+ + K Sbjct: 116 HAGASAFRGRTNINDTSVGIEIVSDGIAKEFIADPNPYHPYDHYVDYKPIQIEKAAQIIK 175 Query: 151 DIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLA-QQGIGAWPDAQRVNFYLAGRAP 209 + +Y+I N++AH+DIAP RK DPG FPW++L + IGAW D ++ Sbjct: 176 YVAEKYNIPARNILAHSDIAPSRKKDPGAKFPWKELYDKYNIGAWYDEADKQEFMDEEKF 235 Query: 210 HTPVDTASLLELLARYGYDVK-PDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEA 268 + + + L +YGY++ D +E + V+ AFQ+HF P GE D ET AI +A Sbjct: 236 NATS-IREIKDELRKYGYEINRFDEWDKESKDVVYAFQLHFNPKNPTGEMDLETFAILKA 294 Query: 269 LLEKY 273 L +KY Sbjct: 295 LNKKY 299 >UniRef50_Q15N79 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=4 Tax=Gammaproteobacteria RepID=Q15N79_PSEA6 Length = 818 Score = 283 bits (725), Expect = 4e-75, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 146/289 (50%), Gaps = 28/289 (9%) Query: 2 RRFFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLA 61 +R + + + CA + ++ R+K LV+H+TA D+ S+ Sbjct: 9 QRSVLICLLTVAIVSCATLPI----------SEMPSKNFSHRVKFLVMHFTAIDYQKSVH 58 Query: 62 TLTD-KQVSSHYLVPAVPPRYNGKP--RIWQLVPEQELAWHAGISAWRGATRLNDTSIGI 118 L D +S+HYL+P K I +LV E + AWHAG S W+G + LND+SIGI Sbjct: 59 ALVDEGGLSAHYLIPESNDPSYPKDSLEILKLVDEDKRAWHAGNSVWQGRSELNDSSIGI 118 Query: 119 ELEN------------RGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYH-IKPENVVA 165 E+ N + F ++P QI+ LI L++ I+AR I P VV Sbjct: 119 EIVNVPECHFDKEANTTSEHGENRLCVFPDYDPKQIELLIALSQQILARNPDISPTKVVG 178 Query: 166 HADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARY 225 H+DIAP RK+DPGP FPW +L Q GIGAW + + Y + P + + L Y Sbjct: 179 HSDIAPSRKNDPGPRFPWFELYQAGIGAWYENETFEAYWQRFNQYQP-NIGLIQSALRAY 237 Query: 226 GYDV-KPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKY 273 GY+V + + + VI AFQMHF P G+AD++T A ALL+KY Sbjct: 238 GYNVLETGIRDEQTSNVISAFQMHFLPWQVTGKADSKTAAAVFALLDKY 286 >UniRef50_A9M6A2 Protein ampD n=39 Tax=Proteobacteria RepID=A9M6A2_BRUC2 Length = 268 Score = 275 bits (703), Expect = 1e-72, Method: Composition-based stats. Identities = 94/272 (34%), Positives = 134/272 (49%), Gaps = 27/272 (9%) Query: 14 LAGCAGEKG------IVEKEGYQLDTRRQAQAAYPRIK-----VLVIHYTA-DDFDSSLA 61 ++G G G ++EK Y+ + PR L++HYT ++ Sbjct: 1 MSGTCGTPGEILPELVLEKPDYKEAELDPSPNFGPRRDGKQPVFLILHYTGLVTAKEAMD 60 Query: 62 TLTDKQ--VSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIE 119 L + VS+HY+V + R+ Q+V E+ AWHAG S W+G T +N SIGIE Sbjct: 61 VLKSPEMEVSAHYVV-------HEDGRVVQMVSEKARAWHAGKSFWKGETDINSASIGIE 113 Query: 120 LENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGP 179 + N G ++ + PF AQI+A+I L +DI R+ I+PENV+AH+DIAP RK DPG Sbjct: 114 IVNPGVLEN-----YPPFHDAQIEAVIRLCQDICKRHEIRPENVLAHSDIAPARKTDPGQ 168 Query: 180 LFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQR 239 FPW++L GIG + + + +L +LA YGY++ E Sbjct: 169 SFPWKRLHDAGIGHYVEPTPICGGRFLARGEQGQPVEALQSMLALYGYEIAITGIFDEAT 228 Query: 240 R-VIMAFQMHFRPTLYNGEADAETQAIAEALL 270 VI AFQ HFRP +G AD T L Sbjct: 229 EIVIKAFQRHFRPQNVDGVADVSTIDTLYRLN 260 >UniRef50_UPI00016A62BF N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A62BF Length = 214 Score = 273 bits (698), Expect = 4e-72, Method: Composition-based stats. Identities = 112/215 (52%), Positives = 135/215 (62%), Gaps = 3/215 (1%) Query: 1 MRRFF--WLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDS 58 MR F A +LA C +V + Y DT R AQ A RI+ LV+HYT D Sbjct: 1 MRLFIRGAFCAGLCMLAAC-TSPSLVGRGTYFADTSRHAQGADARIRFLVMHYTESDEAQ 59 Query: 59 SLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGI 118 SL TLT VS+HY+VPA P GKP ++QLVPE + AWHAG+SAW+GAT LN SIGI Sbjct: 60 SLRTLTGDAVSAHYVVPAQPRIEWGKPVVYQLVPEAQRAWHAGVSAWQGATELNAASIGI 119 Query: 119 ELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPG 178 E N G + + + P+ P Q+ ALI L++DI+ARY I P VV H+DIAPQRK DPG Sbjct: 120 ENVNGGPADTPQGRTWQPYPPEQVDALIRLSQDIVARYAIPPTRVVGHSDIAPQRKIDPG 179 Query: 179 PLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPV 213 P FPW+ LAQ G+GAWPD V LAGR PH V Sbjct: 180 PAFPWRALAQAGVGAWPDDATVAARLAGRDPHAAV 214 >UniRef50_B0T844 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=6 Tax=Alphaproteobacteria RepID=B0T844_CAUSK Length = 243 Score = 269 bits (687), Expect = 9e-71, Method: Composition-based stats. Identities = 90/257 (35%), Positives = 132/257 (51%), Gaps = 23/257 (8%) Query: 22 GIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTA-DDFDSSLATLTDKQ--VSSHYLVPAVP 78 G V+ D R+ +V+HYT + +++LA + D + VS+HY+V Sbjct: 6 GFVDAPSPNFDARKSVP------DCVVLHYTGMETGEAALARMCDPEAKVSAHYMVEE-- 57 Query: 79 PRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFE 138 R+++LVPE+ AWHAG + W+G +N SIG+E+ N G + + PF Sbjct: 58 -----DGRVFRLVPEERRAWHAGAAFWKGVKDINSASIGVEIVNPGHEFG-----YRPFP 107 Query: 139 PAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQ 198 AQ+ A+I L DI +R+ I + ++ H+DIAP RK DPG LFPW++LAQ G G W + Sbjct: 108 DAQVAAVINLLADIRSRWTIDDDRILGHSDIAPGRKIDPGELFPWKRLAQAGHGLWVEPP 167 Query: 199 RVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPRE-QRRVIMAFQMHFRPTLYNGE 257 G+ +L L R GY+ P E V+ AFQ H+ T ++G Sbjct: 168 PSPGAPLGQGEEGTG-VFALQAGLTRLGYNCPPSGNYDEWTATVVAAFQRHWLQTRFDGV 226 Query: 258 ADAETQAIAEALLEKYG 274 AD ET+A ALL G Sbjct: 227 ADGETRARLVALLRAAG 243 >UniRef50_B6JBX5 Negative regulator of AmpC, AmpD n=3 Tax=Alphaproteobacteria RepID=B6JBX5_OLICO Length = 273 Score = 263 bits (673), Expect = 4e-69, Method: Composition-based stats. Identities = 90/253 (35%), Positives = 132/253 (52%), Gaps = 20/253 (7%) Query: 26 KEGYQLDTRRQAQAAYPR---IKVLVIHYTADDF-DSSLATLTDKQ--VSSHYLVPAVPP 79 + + + R ++++V+HYT D++LA L D + VSSHY+V Sbjct: 27 ADSPLASSVMASPNLDERCAPVELIVLHYTGMPEEDAALARLCDAEAKVSSHYVVREN-- 84 Query: 80 RYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEP 139 + QLV E++ AWHAG+S WRGA+ +N SIGIE+ N G P+ Sbjct: 85 -----GEVVQLVAEEKRAWHAGVSCWRGASDINSRSIGIEIVNPGHDGDC-----PPYPD 134 Query: 140 AQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQR 199 QI A+I L +DI+AR I+ + V+AH+DIAP RK DPG FPW +LA +G+G W + Sbjct: 135 PQIAAVIALCRDILARNGIRRDQVLAHSDIAPTRKQDPGEWFPWGRLAAEGVGLWVEPAP 194 Query: 200 VNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEAD 259 ++ A + A+ + LA YGY + P P + V+ AFQ HFRP +G+ D Sbjct: 195 LDD--TSGAEADAGEAAAFIGALAGYGYGITPADPPEVKAAVVAAFQRHFRPARGDGKVD 252 Query: 260 AETQAIAEALLEK 272 + LL Sbjct: 253 RSSIETLRRLLAA 265 >UniRef50_Q07PU2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=33 Tax=Alphaproteobacteria RepID=Q07PU2_RHOP5 Length = 294 Score = 256 bits (655), Expect = 5e-67, Method: Composition-based stats. Identities = 87/243 (35%), Positives = 117/243 (48%), Gaps = 16/243 (6%) Query: 32 DTRRQAQAAYPRIKVLVIHYTA-DDFDSSLATLTDK--QVSSHYLVPAVPPRYNGKPRIW 88 + ++V+HYT D + +LA L +VS+HY+V RI Sbjct: 44 SPNFGDRNKGRAPDMIVLHYTGMPDVEGALARLCQDGTEVSAHYVVLE-------DGRIV 96 Query: 89 QLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPL 148 Q VPE + AWHAG++ W G +N SIGIE+ NRG + F Q+ A+I L Sbjct: 97 QCVPEAKRAWHAGLAFWAGEEDINSCSIGIEIVNRGHD-----WGYPDFPLRQVAAVIAL 151 Query: 149 AKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRA 208 + II R I+P V+AH+D+AP RK DPG FPW+ L G+G W A + + Sbjct: 152 CRGIIIRRGIQPHRVLAHSDVAPARKQDPGEKFPWRALWDSGVGHWVPAAPIVRGDVMKL 211 Query: 209 PHTPVDTASLLELLARYGYDVKPDM-TPREQRRVIMAFQMHFRPTLYNGEADAETQAIAE 267 +L LA YGY + P V+ AFQ HFRP +G AD T A Sbjct: 212 GSDGDAVLALQRALAEYGYGLTPSGHYNAATAEVVTAFQRHFRPQKVDGIADTSTLATLH 271 Query: 268 ALL 270 ALL Sbjct: 272 ALL 274 >UniRef50_C6QHF6 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QHF6_9RHIZ Length = 256 Score = 256 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 91/249 (36%), Positives = 126/249 (50%), Gaps = 17/249 (6%) Query: 27 EGYQLDTRRQAQAAYPRIKVLVIHYTA-DDFDSSLATLT--DKQVSSHYLVPAVPPRYNG 83 ++ + + R +L++HYT + ++ L + VS HY++ + Sbjct: 11 GSVRVAENHEPRRGGVRPSLLILHYTGMSSAEKAIDWLARAESNVSCHYVI-------DE 63 Query: 84 KPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQ 143 RI QLVPE AWHAG S WRG T +N SIGIE++N G Q + F AQ+Q Sbjct: 64 DGRITQLVPESLRAWHAGASFWRGETDINSHSIGIEIQNPGHQHG-----YPDFPAAQMQ 118 Query: 144 ALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFY 203 A+I L KDI R+ + + V+AH+DIAP RK DPG F W LA+QG+G W V+ Sbjct: 119 AVIALGKDIAQRHRMAADAVLAHSDIAPGRKIDPGEKFNWALLARQGLGLWVRPSSVHAD 178 Query: 204 LAG-RAPHTPVDTASLLELLARYGYDVKPDM-TPREQRRVIMAFQMHFRPTLYNGEADAE 261 G + A+ ELLA YGY V+ V+ AFQ HFRP +G D Sbjct: 179 DPGLDIGASGSRVAAAQELLALYGYRVEQSGILDDGTSHVLKAFQAHFRPRRVDGRLDRS 238 Query: 262 TQAIAEALL 270 T+ E L+ Sbjct: 239 TELTLERLI 247 >UniRef50_Q2RVT4 AmpD (Negative regulator of AmpC) n=2 Tax=Rhodospirillaceae RepID=Q2RVT4_RHORT Length = 241 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 94/252 (37%), Positives = 127/252 (50%), Gaps = 30/252 (11%) Query: 23 IVEKEGYQLDTRRQAQAAYPRIKVLVIHYTA-DDFDSSLATLTDKQ--VSSHYLVPAVPP 79 ++E D R Q I +LVIHYT ++LA L D Q VS+H+L+ Sbjct: 12 VIEALSPNADDRPPGQI----IDMLVIHYTGMPSAQAALARLLDPQAQVSAHWLI----- 62 Query: 80 RYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEP 139 + ++LV E+ AWHAG+SAW G +N SIGIEL N G + + PF Sbjct: 63 --DEDGTAYKLVEERRRAWHAGVSAWGGRPGVNARSIGIELVNPGHEFG-----YRPFPE 115 Query: 140 AQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQR 199 AQ+ LI L + I+ R+ I +VV HAD+AP RK+DPG LF WQ+LA GIG WP Sbjct: 116 AQMTTLIALGRGILERHPIPAAHVVGHADVAPTRKEDPGELFDWQRLASNGIGRWPPPP- 174 Query: 200 VNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEAD 259 L R LL + GYD+ + ++AFQ HFRP +G D Sbjct: 175 ----LGVRPETVDATEGEAACLLEQIGYDISS------LQATVLAFQRHFRPKRLDGRID 224 Query: 260 AETQAIAEALLE 271 +ET + +AL Sbjct: 225 SETLWLIKALAR 236 >UniRef50_C4SAC3 Negative regulator of beta-lactamase expression n=4 Tax=Proteobacteria RepID=C4SAC3_YERMO Length = 209 Score = 254 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 89/191 (46%), Positives = 113/191 (59%), Gaps = 2/191 (1%) Query: 84 KPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQ 143 RI+ LV E AWHAG+S+W T LNDTSIGIE+ N K GV F P+ QI Sbjct: 16 DMRIFNLVDENARAWHAGVSSWAERTNLNDTSIGIEIVNLASDKE-GVWDFPPYPIEQIA 74 Query: 144 ALIPLAKDIIARYH-IKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNF 202 A+ LA +I+ RY I P NVVAH+DIAP RK DPGP+FPWQ+L ++GIGAW D Sbjct: 75 AVKQLAANILQRYPDITPVNVVAHSDIAPTRKSDPGPMFPWQELYEEGIGAWYDIDTKEK 134 Query: 203 YLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAET 262 ++ L+ YGYD + + ++ AFQ+HFRP+ Y+GE D ET Sbjct: 135 FIQEFTEEGLPAKDELVTHFGTYGYDASIASSEAGYQYLVRAFQLHFRPSNYDGEVDIET 194 Query: 263 QAIAEALLEKY 273 AI AL+EKY Sbjct: 195 AAILYALVEKY 205 >UniRef50_B3ESH1 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ESH1_AMOA5 Length = 322 Score = 251 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 90/260 (34%), Positives = 130/260 (50%), Gaps = 18/260 (6%) Query: 32 DTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK----QVSSHYLVPAVPPRYN-GKPR 86 + I LV+HYT +F +++ T +VS+HY+V + Sbjct: 62 NRNHYGDRGTEDIAYLVMHYTVCNFPATMRLFTSDIPEGRVSAHYVVTEEERERDVQGGM 121 Query: 87 IWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGW-QKSAGVKYFAPFEPAQIQAL 145 ++Q+VPE++ AWHAGIS WRG LN SIG+E N+G+ K + + F+ QI++L Sbjct: 122 VFQVVPEEKTAWHAGISYWRGEQGLNLRSIGVENVNKGFVGKESEYPNWFTFDKKQIRSL 181 Query: 146 IPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLA-QQGIGAW-PDAQRVNFY 203 L++ I+ Y+I P+NVV HADIAP RK DPG LFPW++L G+GAW + +R Sbjct: 182 GTLSQYIVNSYNIAPQNVVGHADIAPTRKQDPGILFPWEKLYTHYGVGAWLTEDERDEKA 241 Query: 204 LAGRAP-----HTPVDTASLLELLARYGYDVKPDMT-PREQRRVIMAFQMHFR----PTL 253 +A R + A LL L YGY+ E ++ AF+ HF P Sbjct: 242 IAERFTPKEKLPQGISEAFLLTCLQAYGYNCTEVGYMTPENTSIVKAFKAHFSRNQYPYT 301 Query: 254 YNGEADAETQAIAEALLEKY 273 Y+ D L EKY Sbjct: 302 YDASIDRTDMLWVWGLSEKY 321 >UniRef50_Q0BV14 Anhydro-N-acetylmuramyl-tripeptide amidase n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BV14_GRABC Length = 250 Score = 249 bits (636), Expect = 8e-65, Method: Composition-based stats. Identities = 96/258 (37%), Positives = 128/258 (49%), Gaps = 29/258 (11%) Query: 20 EKGIVEKEGYQLDTRRQAQAAYPR-IKVLVIHYTA-DDFDSSLATLTDK--QVSSHYLVP 75 I E+ D R A A P + +LV+HYT +++ L D +VSSHY+V Sbjct: 8 MPPIRERPSPNYDARPSATAGTPGAVDMLVLHYTGMTSAAAAIDRLCDPEARVSSHYVVE 67 Query: 76 AVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFA 135 +W+LV EQ AWHAGIS WRG + LND S+GIE+ N G + + Sbjct: 68 E-------DGTVWRLVWEQYRAWHAGISHWRGRSWLNDFSVGIEIVNPGHE-----WGYR 115 Query: 136 PFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWP 195 F AQ+++++ LA I+ ++ I ++VAH+DIAP RK DPG LF W+ LAQ GIG WP Sbjct: 116 AFPEAQMRSVLALAHAIVRQHSIPAAHIVAHSDIAPDRKQDPGELFDWRWLAQHGIGVWP 175 Query: 196 DAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYN 255 DA V P + L R GY T V+ AFQ F P + Sbjct: 176 DATPVK--------DRPKQENDPWDFLRRIGYR-----TDLPLDMVLRAFQRRFLPDRPD 222 Query: 256 GEADAETQAIAEALLEKY 273 G ADA T A + Y Sbjct: 223 GSADAATLARLATVAHAY 240 >UniRef50_B2IHS0 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=26 Tax=Alphaproteobacteria RepID=B2IHS0_BEII9 Length = 304 Score = 249 bits (635), Expect = 9e-65, Method: Composition-based stats. Identities = 88/262 (33%), Positives = 122/262 (46%), Gaps = 20/262 (7%) Query: 19 GEKGIVEKEGYQLDTRRQAQAAYPR----IKVLVIHYTAD-DFDSSLATLTDK--QVSSH 71 G + ++ + R +++H+TA +++L L D +VS+H Sbjct: 11 GTTPSFTGDTPLVNDVHPSPNHGDRKGRQPDAIILHHTAMVSGEAALLRLCDPAAEVSAH 70 Query: 72 YLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGV 131 YLV RI QLV E+ AWHAG S W G +N SIGIEL + G + + Sbjct: 71 YLV-------WEDGRISQLVAEKHRAWHAGQSYWAGERDMNSVSIGIELVHPGPEGGS-- 121 Query: 132 KYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGI 191 P+E AQI A I L DI+ R I V+ H DIAP RKDDP FPW QLA G+ Sbjct: 122 ---PPYEEAQIAATIALCLDIMRRRSIPAARVLGHCDIAPDRKDDPSAHFPWAQLAAAGV 178 Query: 192 GAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVK-PDMTPREQRRVIMAFQMHFR 250 G + + + +L LLA GY + ++ + V+ AFQ H+R Sbjct: 179 GLYVPPSPIVEGPRHQNGEHGQHIETLQSLLAILGYGLSITNLYGMKTEAVVRAFQRHYR 238 Query: 251 PTLYNGEADAETQAIAEALLEK 272 P L +G AD T +ALL Sbjct: 239 PALIDGIADVSTIETLKALLAA 260 >UniRef50_Q4FPN2 Probable N-acetylmuramoyl-L-alanine amidase n=2 Tax=Candidatus Pelagibacter ubique RepID=Q4FPN2_PELUB Length = 247 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 78/245 (31%), Positives = 120/245 (48%), Gaps = 18/245 (7%) Query: 36 QAQAAYPRIKVLVIHYTA-DDFDSSLATLT--DKQVSSHYLVPAVPPRYNGKPRIWQLVP 92 + +IK ++ HYT +L LT +VS HYL+ I ++VP Sbjct: 15 PKKRTSKQIKFIIFHYTGMKSESDALKRLTEIQSEVSCHYLIKNN-------GEIVKIVP 67 Query: 93 EQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDI 152 + +AWHAG S+W+ LN SIGIE+ N G + + F QI L+ L+K + Sbjct: 68 DLYIAWHAGKSSWKNYKSLNQNSIGIEITNPGHEYG-----YKNFTQKQITTLVKLSKFL 122 Query: 153 IARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTP 212 I +Y I P+N++ H+DIA RK DPG FPW+ LA+ IG W + + + + Sbjct: 123 IKKYKINPKNILGHSDIAVLRKKDPGEKFPWEYLAKNKIGIWHTLNKQDLLKNRKLKISK 182 Query: 213 VDTASLLELLARYGYD-VKPDMTPREQR--RVIMAFQMHFRPTLYNGEADAETQAIAEAL 269 V+ L + GY P R + +I +FQ FR L +G+ D E+ I ++L Sbjct: 183 VEENIFFRNLFKIGYSKTFPKNIGRNKYLIELIKSFQRRFRQELVDGKIDQESLLINKSL 242 Query: 270 LEKYG 274 ++ Y Sbjct: 243 IKAYN 247 >UniRef50_C6XME2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XME2_HIRBI Length = 236 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 87/258 (33%), Positives = 125/258 (48%), Gaps = 33/258 (12%) Query: 22 GIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTA-DDFDSSLATLTDKQ--VSSHYLVPAVP 78 I++ D RRQ + +LV+HYT ++L + D + V++HY+V Sbjct: 7 TIIQAPSVNFDERRQP------LSMLVLHYTGMQTGQAALGRMCDPEAKVAAHYMVEE-- 58 Query: 79 PRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFE 138 RI+QLV E + AWHAG+ WRG +N SIGIE+ N G F Sbjct: 59 -----DGRIFQLVDESKRAWHAGVGTWRGLDDINSRSIGIEIVNGGHDYG-----LPDFP 108 Query: 139 PAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQ 198 QI A+I L +D+++R+ I ++V H+DIAP RKDDPG FPW++LA GIG WPD Sbjct: 109 EIQIDAVIALCRDVLSRHQILQSDIVGHSDIAPGRKDDPGEKFPWEKLAHAGIGLWPDES 168 Query: 199 RVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEA 258 + + +ELLA GY + + +E VI AFQ + GE Sbjct: 169 KKALSVGS------------VELLAEIGYGLNASPSDQEITCVIRAFQQRWMQDNVTGEP 216 Query: 259 DAETQAIAEALLEKYGQD 276 ET + Y ++ Sbjct: 217 CLETLCRVAQIASIYREN 234 >UniRef50_A5V2C7 N-acetylmuramoyl-L-alanine amidase, family 2 n=6 Tax=Sphingomonadales RepID=A5V2C7_SPHWW Length = 241 Score = 244 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 96/241 (39%), Positives = 127/241 (52%), Gaps = 32/241 (13%) Query: 36 QAQAAYPR---IKVLVIHYTAD-DFDSSLATLTDKQ--VSSHYLVPAVPPRYNGKPRIWQ 89 + R I +LV+HYT D S++A LTD + VSSHYLV ++ + Sbjct: 11 PSPNHDERTLPITMLVLHYTGMADAASAIARLTDPEAKVSSHYLVAE-------DGQVMR 63 Query: 90 LVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLA 149 LVPE AWHAG S+WRG T +N SIGIE+ N G + + PF Q+ ALIPL Sbjct: 64 LVPEDRRAWHAGQSSWRGVTDVNSASIGIEIVNPGHELG-----YRPFPKPQMDALIPLI 118 Query: 150 KDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAP 209 DI +R+ I+P NVV H+D+AP+RK DPG LF W+ L + G+ R + Sbjct: 119 SDITSRHPIEPANVVGHSDVAPRRKQDPGELFDWELLGKLGLAL-----RRPRHGLADPH 173 Query: 210 HTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEAL 269 TP L L R+GYDV + ++AFQ FRP +G AD E +AI L Sbjct: 174 WTP---GGFLLALDRFGYDVS------DGPAAVIAFQRRFRPERIDGIADGECRAILLRL 224 Query: 270 L 270 L Sbjct: 225 L 225 >UniRef50_B6BSD7 Probable N-acetylmuramoyl-L-alanine amidase YbjR n=1 Tax=Candidatus Pelagibacter sp. HTCC7211 RepID=B6BSD7_9RICK Length = 248 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 74/232 (31%), Positives = 116/232 (50%), Gaps = 16/232 (6%) Query: 44 IKVLVIHYTA-DDFDSSLATLTDKQ--VSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHA 100 +K ++ HYT + ++ LT+ + VSSHYL+ I LVP+ +AWHA Sbjct: 26 VKFIIFHYTGMKKENQAITRLTNSKSKVSSHYLIKNN-------GEILTLVPDLYVAWHA 78 Query: 101 GISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKP 160 GIS+W+ +N SIGIE+ N G + S + F Q++++I L+ +I +Y+IKP Sbjct: 79 GISSWKNYKSINKYSIGIEISNPGHEYS-----YKKFSKEQVKSIIKLSTYLIKKYNIKP 133 Query: 161 ENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLE 220 ++ H+DIAP RK DPG FPW+ L++ IG W + + + ++ Sbjct: 134 NFILGHSDIAPDRKKDPGEKFPWKYLSKNKIGHWHNLNEKKIFKKRNLTEGKKEKIKFIK 193 Query: 221 LLARYGYDVKPDMTPREQRRVI-MAFQMHFRPTLYNGEADAETQAIAEALLE 271 L GY + +++ AFQ FR L NG D E I+ L + Sbjct: 194 NLYEIGYPKNILFNKYKYSKLLTTAFQRRFRQELVNGIIDQECLVISNNLAK 245 >UniRef50_B6IRH2 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Rhodospirillum centenum SW RepID=B6IRH2_RHOCS Length = 254 Score = 237 bits (604), Expect = 4e-61, Method: Composition-based stats. Identities = 91/254 (35%), Positives = 125/254 (49%), Gaps = 38/254 (14%) Query: 36 QAQAAYPR-----IKVLVIHYTAD-DFDSSLATLTDK--QVSSHYLVPAVPPRYNGKPRI 87 + PR I +LV+HYT + +L L D +VS+HY++ + + Sbjct: 10 PSPNHGPRRPGAAIDMLVLHYTGMRTAEEALERLCDPAAEVSAHYVI-------DEDGTL 62 Query: 88 WQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIP 147 ++LV E AWHAG+S WRG +N SIGIEL N G + PF AQ+ L Sbjct: 63 YRLVREDRRAWHAGLSFWRGERDVNSRSIGIELVNPGHAFG-----YRPFPEAQMATLES 117 Query: 148 LAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGR 207 LA D++A Y I P +V+ H+D+AP RK+DPG LF W +LA+ GIGAWP+ A Sbjct: 118 LAADLVAHYRIPPLHVLGHSDVAPARKEDPGELFDWPRLARAGIGAWPEPAA-----ADD 172 Query: 208 APHTPVDTASLLELLARYGYD--VKPDMTPREQR------RVIMAFQMHFRPTLYNGE-- 257 AP T + ASL LA GY+ P +V+ AF+ H+ P +G Sbjct: 173 APWTEAEVASL---LAAVGYEPLPSPGTAWDGTAWDGTAGQVLTAFRRHWHPAALSGPLR 229 Query: 258 ADAETQAIAEALLE 271 DA AL Sbjct: 230 PDAGDVCRLRALAR 243 >UniRef50_A8TR24 Negative regulator of beta-lactamase expression n=1 Tax=alpha proteobacterium BAL199 RepID=A8TR24_9PROT Length = 247 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 80/260 (30%), Positives = 116/260 (44%), Gaps = 30/260 (11%) Query: 20 EKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADD-FDSSLATLTDK--QVSSHYLVPA 76 E ++E R I +L++HYT + +L + D QVS+HYLV Sbjct: 4 EPTVIEHPSPNHGPRPVGAP----IDILLLHYTDMTRAEDALDRMCDPAAQVSAHYLVGE 59 Query: 77 VPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAP 136 R+W++V E AWHAG+S W G + +N SIGIE+ N G + P Sbjct: 60 -------DGRVWRMVAEDRRAWHAGVSWWDGDSDINSRSIGIEISNPGHSHG-----YRP 107 Query: 137 FEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPD 196 F Q+ AL L + I+AR+ I V+ H+D++P RK DPG LF W LA +GIG WP Sbjct: 108 FPDVQMSALESLCRGILARHPIPANRVLGHSDVSPGRKIDPGHLFDWHWLASRGIGLWPT 167 Query: 197 AQRVNFYLAGRAPHTPVDTASLLELLARYGYDV-KPDMTPREQRRVIMAFQMHFRPTLYN 255 A P D A L GY + +M + + AF+ H+ P Sbjct: 168 DPAP-------ATLQPEDIA---AALGTIGYRIGGAEMADPAAQSALWAFRRHWCPQSLK 217 Query: 256 GEADAETQAIAEALLEKYGQ 275 D + +A+ + Sbjct: 218 HPLDRHVGGVLKAVSAAIKK 237 >UniRef50_A3HXI6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Algoriphagus sp. PR1 RepID=A3HXI6_9SPHI Length = 299 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 90/315 (28%), Positives = 129/315 (40%), Gaps = 64/315 (20%) Query: 1 MRRFFWLVAAALLLAGCAGEK---------------------GIVEKEGYQLDTRR---- 35 + F+L+ +LL+ CA KE DT Sbjct: 6 ITSAFFLICVSLLIVSCASNPYKKINKEYEKNVKDVSAAYLEIPKTKEELNYDTLSITDE 65 Query: 36 ---QAQAAYPRIKVLVIHYTADD-FDSSLATLT--DKQVSSHYLVPAVPPRYNGKPRIWQ 89 + R ++IH+TA D + ++ T T QVSSHY++ I Q Sbjct: 66 WVGTTNFSIRRPNFVIIHHTAQDSLEQTIRTFTLPRTQVSSHYVIAK-------DGTIVQ 118 Query: 90 LVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLA 149 ++ + +WHAG W T LN SIGIEL+N G F PF AQI++L+ L Sbjct: 119 MLNDYLRSWHAGRGKWGSVTDLNSVSIGIELDNNG---------FEPFPEAQIESLLILC 169 Query: 150 KDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAP 209 K + +Y I N + H+DIAP RK DP FPW QLA +G G W D V + + Sbjct: 170 KRLKWKYGIPTANFIGHSDIAPSRKVDPNRFFPWDQLAMEGYGFWYDVDEVFPVINPKDD 229 Query: 210 HTPV----------DTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRP-TLYNGEA 258 T + D+ + L GYDV I +F++HF ++ E Sbjct: 230 QTSIPLENTDTLLKDSFDPIMALRIIGYDVSVP------SNAIQSFKLHFVQGEEFSTEL 283 Query: 259 DAETQAIAEALLEKY 273 I + L +KY Sbjct: 284 TELDLRILKNLYKKY 298 >UniRef50_A5CBZ0 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Orientia tsutsugamushi RepID=A5CBZ0_ORITB Length = 366 Score = 227 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 89/283 (31%), Positives = 127/283 (44%), Gaps = 36/283 (12%) Query: 27 EGYQLDT---------RRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK-----QVSSHY 72 GY +D + IK L++HYT +F S+ T QVSSH Sbjct: 78 TGYAIDEFPENEDNRNHYTQRNQDTSIKYLIMHYTVCNFSSTAQEFTVNKPLLGQVSSHI 137 Query: 73 LVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVK 132 ++ + VPE ++A+HAG+SAW+ T LN SIGIE NRG+ K Sbjct: 138 VITEAEEGKTPAGILISFVPENKIAYHAGVSAWQNDTNLNSMSIGIEHVNRGFNTVNAKK 197 Query: 133 YFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQ-GI 191 + ++ QI ++ II RY+IKP +V+ H+DIA RK DPGPLFPW QL + + Sbjct: 198 EWVCYDKHQIATSGIVSSGIIRRYNIKPIHVLGHSDIAYNRKSDPGPLFPWGQLYHEYNV 257 Query: 192 GAWPDAQR------VNFYLAGRAPHTPVDTASLLELLARYGYDV----------KPDMTP 235 GAW Y + +D + L+LL YGY + P T Sbjct: 258 GAWLTDAELNSQYIKEKYNPKISDPDKIDDITFLKLLQEYGYHIPDNVDLNKTDNPKQTV 317 Query: 236 REQRRVIMAFQMHF----RPTLYN-GEADAETQAIAEALLEKY 273 +I+AF+ HF P L + + + + AL KY Sbjct: 318 ALCAPLILAFKAHFSANQHPELCDNAQITSTDKYWIWALTAKY 360 >UniRef50_Q28T26 Negative regulator of AmpC AmpD n=39 Tax=Rhodobacterales RepID=Q28T26_JANSC Length = 227 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 82/249 (32%), Positives = 115/249 (46%), Gaps = 42/249 (16%) Query: 36 QAQAAYPR-----IKVLVIHYTA-DDFDSSLATLTD--KQVSSHYLVPAVPPRYNGKPRI 87 Q+ PR +++VIHYTA + S+ L D ++VS+HYL+ + Sbjct: 7 QSPNFGPRRDGLKPELVVIHYTAMPNCASAAKVLCDPAREVSAHYLI-------GRDGDV 59 Query: 88 WQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIP 147 LVPE AWHAG WRGA +N SIGIEL+N G PF + AL Sbjct: 60 LNLVPEDMRAWHAGKGEWRGAGDVNSRSIGIELDNDG---------LTPFSEPLMAALET 110 Query: 148 LAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGR 207 L ++A + I P+ V+ H+D+AP RK DPG F WQ+LA+QG+ W + Sbjct: 111 LLPTVLAAWRIGPDGVIGHSDMAPGRKIDPGRRFDWQRLARQGLAVW-----------SQ 159 Query: 208 APHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAE 267 A VD A +GY + ++ +M FRP +G D AI Sbjct: 160 ASGDTVDAARFRGDAQAFGYG------DMDDTLLLDVVRMRFRP-WASGPLDGTDCAIMA 212 Query: 268 ALLEKYGQD 276 + +YG D Sbjct: 213 DIAARYGLD 221 >UniRef50_C6XXC7 N-acetylmuramoyl-L-alanine amidase family 2 n=3 Tax=Sphingobacteriaceae RepID=C6XXC7_PEDHD Length = 276 Score = 222 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 83/302 (27%), Positives = 127/302 (42%), Gaps = 64/302 (21%) Query: 2 RRFFWLVAAALLLAGCAGEKGIVE---------------KEGYQLDTRRQAQAAYP---- 42 R + + + LL C+ K K L+ + A P Sbjct: 8 RHYLYFIP-LFLLTACSTNKYAATNKVYKKQAAGFAETIKAAPPLNQGIDSLPANPLSWV 66 Query: 43 --------RIKVLVIHYTADDF-DSSLATLT--DKQVSSHYLVPAVPPRYNGKPRIWQLV 91 + +V+H+TA D +L T T QVSSHY++ +++Q+V Sbjct: 67 GSVNFGIRKPNFVVLHHTAQDSSAQTLKTFTITRTQVSSHYVI-------GRDGKVFQMV 119 Query: 92 PEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKD 151 + A HAG+S W LN +SIGIE++N G + P+ QI++LI + + Sbjct: 120 NDYLRANHAGVSRWGNEMDLNSSSIGIEIDNNGKE---------PYSEVQIKSLITVLRA 170 Query: 152 IIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHT 211 + RY I N + HADIAP RK+DP FPW+++A +G G W D V Sbjct: 171 LKKRYGIPTANFIGHADIAPGRKNDP-RNFPWKRMAAEGFGFWYDDVLVM---------- 219 Query: 212 PVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLE 271 P D + L GY+V + I AF++HF T + + I + + Sbjct: 220 PPDDFDAVAALRIIGYNV------KNLNAAIEAFKIHFVQTDISQVLTPADKLILFNVYK 273 Query: 272 KY 273 KY Sbjct: 274 KY 275 >UniRef50_A5FA27 N-acetylmuramoyl-L-alanine amidase, family 2 n=2 Tax=Bacteroidetes RepID=A5FA27_FLAJ1 Length = 301 Score = 219 bits (559), Expect = 7e-56, Method: Composition-based stats. Identities = 76/233 (32%), Positives = 110/233 (47%), Gaps = 35/233 (15%) Query: 43 RIKVLVIHYTADD-FDSSLATLT--DKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWH 99 + ++IH+TA D ++ T T QVSSHY++ ++ Q++ + AWH Sbjct: 98 KPSFVIIHHTAQDSLQQTINTFTKTRTQVSSHYIISEN-------GKVVQMLNDYLRAWH 150 Query: 100 AGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIK 159 AG S W T LN +SIGIEL+N G F PF AQI +L+ L + Y+I Sbjct: 151 AGNSTWGKNTDLNSSSIGIELDNNG---------FKPFTEAQISSLVALLTKLKKDYNIP 201 Query: 160 PENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLL 219 +N + HADIAP RK DP LFPW+ LA++G G WPDA + Sbjct: 202 TQNFLGHADIAPGRKQDPSALFPWKTLAEKGFGIWPDA----------VLEEAPFDFKIE 251 Query: 220 ELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEK 272 L GY+ + I AF++H+ T D +T ++ +K Sbjct: 252 PALRIIGYNT------KNLSAAIQAFKLHYIQTDTTATLDRKTIDTIYSIYKK 298 >UniRef50_C7PRR2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PRR2_CHIPD Length = 275 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 79/261 (30%), Positives = 113/261 (43%), Gaps = 38/261 (14%) Query: 19 GEKGIVEKEGYQ--LDTRRQAQAAYPRIKVLVIHYTA-DDFDSSLATLT--DKQVSSHYL 73 E V G ++ + ++IH+TA D++ T T QVS+HY+ Sbjct: 44 TEPAAVPATGAPTAVNWIGTTNFNLRKPNYVIIHHTAQGSCDTTFNTFTLPRTQVSAHYV 103 Query: 74 VPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKY 133 + I ++ + AWHAGI+ W T +N SIGIEL+N G Sbjct: 104 ICK-------DGTINHMLNDYLRAWHAGIAKWGNVTDMNSCSIGIELDNNG--------- 147 Query: 134 FAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGA 193 PF+P QI +L+ L + R++I N + H DIAP RK DP FPWQQLA++G G Sbjct: 148 LTPFQPQQINSLLVLLDSLKHRFNIPAANFIGHGDIAPGRKVDPSAWFPWQQLAEKGFGL 207 Query: 194 WPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTL 253 W + + L GYD R+ I AF+ HF PT Sbjct: 208 WYGDTSKIIIPGDFSS---------KQALRIVGYDT------RDTVAAIKAFKRHFVPTD 252 Query: 254 Y--NGEADAETQAIAEALLEK 272 + D + I +L+EK Sbjct: 253 TTNSTSLDEGERKILFSLMEK 273 >UniRef50_C7D9N0 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=Thalassiobium sp. R2A62 RepID=C7D9N0_9RHOB Length = 237 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 85/259 (32%), Positives = 114/259 (44%), Gaps = 44/259 (16%) Query: 24 VEKEGYQLDTRRQAQAAYPR-----IKVLVIHYTA-DDFDSSLATLTDK--QVSSHYLVP 75 V QL +Q PR ++V+HYTA +D D + L + QVSSHY+V Sbjct: 6 VPFGSKQLTLSHPSQNFGPRRNGLRPSLIVLHYTAMNDADGACRWLCNPESQVSSHYVVT 65 Query: 76 AVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFA 135 V +W LV E + AWHAG W G +N SIGIE+ N G Sbjct: 66 EV-------GAVWSLVEEADRAWHAGAGTWGGLDDINSRSIGIEISNAGTHG-------- 110 Query: 136 PFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWP 195 F AQ+ A+ L I+ R+ I E V+ H+D AP RK DPG F W++LA G+ W Sbjct: 111 -FAAAQMDAVEALVAGIMDRWDIPAEGVIGHSDFAPGRKIDPGGRFDWRRLALGGLAVWS 169 Query: 196 DAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMA-FQMHFRPTLY 254 + Q+V+ D R+GY V Q V++A +M FRP Sbjct: 170 EGQQVD-----------PDWDGFRAAAVRFGYPV-------AQDDVLLATMRMRFRP-WA 210 Query: 255 NGEADAETQAIAEALLEKY 273 G DA L +Y Sbjct: 211 RGPLDAVDMGRMCDLAARY 229 >UniRef50_Q2NVA7 Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NVA7_SODGM Length = 201 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 80/231 (34%), Positives = 105/231 (45%), Gaps = 37/231 (16%) Query: 29 YQLD--TRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPR 86 Y +D + R + R++ L++HYTA DF S+ L+ Sbjct: 2 YPIDATSYRSVKGFNSRVRFLIMHYTAVDFAGSVRALSSD-------------------- 41 Query: 87 IWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALI 146 A SAW G LNDTSIGIE N K+ G F P+ P QI A+I Sbjct: 42 -------------AAFSAWAGRNNLNDTSIGIENVNLASVKN-GKLIFPPYHPVQIAAII 87 Query: 147 PLAKDIIARYH-IKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLA 205 LA+DI+ RY I P ++ H+D+AP RK DPG FPWQ L GIGAW D +YL Sbjct: 88 QLAQDILQRYPDITPTQIIGHSDVAPGRKFDPGAAFPWQTLFTAGIGAWFDEATKQYYLD 147 Query: 206 GRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNG 256 A D A+++ L YGY+ + +I AF F P G Sbjct: 148 EFAGQGLPDQAAIIGKLKAYGYNTSGATDASVYKNLIQAFPTAFPPRRLAG 198 >UniRef50_D0CW21 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CW21_9RHOB Length = 418 Score = 200 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 73/226 (32%), Positives = 107/226 (47%), Gaps = 38/226 (16%) Query: 35 RQAQAAYPR-----IKVLVIHYTA-DDFDSSLATLTDKQ--VSSHYLVPAVPPRYNGKPR 86 + PR ++V+HYTA + ++L L D + VS+HYL+ Sbjct: 203 HPSPNFGPRRDGLKPSLVVLHYTAMNSARAALERLCDPESEVSAHYLIGC-------DGT 255 Query: 87 IWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALI 146 +WQ+V E++ AWHAG+ W+G + +N SIGIEL+NRG PF AQI+ L Sbjct: 256 LWQMVREEDRAWHAGVGEWQGQSDINSRSIGIELDNRGD---------HPFAQAQIRVLE 306 Query: 147 PLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAG 206 L I+ R+ I V+ H+D+AP RK DPGP F W +L +QG+ A P A + Sbjct: 307 RLLPQIMTRWSIPAAGVIGHSDMAPGRKHDPGPRFDWLRLERQGLAA-PRAHAAHLSW-- 363 Query: 207 RAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPT 252 + L GY E ++ A ++ FRP Sbjct: 364 ------PEAQYFRALAQAAGY---TAAVDDET--LLAAVRLRFRPW 398 >UniRef50_C2G1S0 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Sphingobacterium spiritivorum RepID=C2G1S0_9SPHI Length = 297 Score = 197 bits (501), Expect = 3e-49, Method: Composition-based stats. Identities = 75/234 (32%), Positives = 108/234 (46%), Gaps = 34/234 (14%) Query: 43 RIKVLVIHYTADD-FDSSLATLT--DKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWH 99 + ++IH+TA D +L T T +VS+HYL+ K ++QL+ + WH Sbjct: 95 KPNYVIIHHTAQDSLKQTLRTFTLEHTKVSAHYLIGK-------KGEVYQLLNDYLRGWH 147 Query: 100 AGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIK 159 AG S W T +N S+GIEL+N G + PF QI AL+ L + Y I Sbjct: 148 AGASKWGSVTDMNSVSLGIELDNNGRE---------PFSDVQINALLTLLDTLKTNYDIP 198 Query: 160 PENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLL 219 N + H DIAP RK+DP FPW++LA++G G W D R TP + + + Sbjct: 199 TANFIGHGDIAPTRKNDPSIFFPWKKLAERGFGLWYDE---------RTLMTPPEYFNPV 249 Query: 220 ELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKY 273 + L GYD R I+AF+ F E +++ L KY Sbjct: 250 DALKIIGYDT------RNLSAAIVAFKRKFIVNDLRPELTLYDKSVLYNLYLKY 297 >UniRef50_Q0F4W8 N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0F4W8_9RHOB Length = 238 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 73/240 (30%), Positives = 109/240 (45%), Gaps = 33/240 (13%) Query: 18 AGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTA-DDFDSSLATLTDK--QVSSHYLV 74 A + I ++ RR ++V+HYTA ++ L+D +VS+HYL+ Sbjct: 2 ASDLNIFQQPSPNFGIRR----GGVIPSMIVLHYTAMKSSKDAIQRLSDPKSEVSAHYLI 57 Query: 75 PAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYF 134 + ++ QLV EQ+ AWHAG W +N SIGIEL+ K Sbjct: 58 -------DEAGKVTQLVDEQKRAWHAGQGCWGEINDINSYSIGIELDYCPSAKCN----- 105 Query: 135 APFEPAQIQALIPLAKDIIARY-HIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGA 193 F+ QI +L L DI+ R I+PE ++AH+D+AP RK DPG FPW++L+Q+G+ Sbjct: 106 --FDERQISSLEKLLFDILKRRSEIRPEFIIAHSDMAPGRKFDPGMYFPWKKLSQKGLSI 163 Query: 194 WPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTL 253 WP+ D R+GY D V+ F++ F P Sbjct: 164 WPEN----------ILDLAADWGKFKYHAERFGYRASCDTFG-GWTDVLDVFRLRFLPKQ 212 >UniRef50_UPI0001793312 PREDICTED: hypothetical protein n=1 Tax=Acyrthosiphon pisum RepID=UPI0001793312 Length = 276 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 86/254 (33%), Positives = 132/254 (51%), Gaps = 26/254 (10%) Query: 38 QAAYPRIKVLVIHYTADDFDSSLATLTDKQ------VSSHYLVPAVPPRYNGKPRIWQLV 91 + +IK++V+H+T DF +++ T K+ VSSHY++ P ++ Q+V Sbjct: 31 KNVNNKIKIIVLHFTGIDFGATVKEFTSKRSNTSRNVSSHYVIAR-PTEAGTHNQLLQVV 89 Query: 92 PEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKD 151 PE +++HAGIS W + +N SIGIE+ N G+ +A + PF QI + + Sbjct: 90 PENYVSYHAGISLWGNYSSINSISIGIEIVNYGY--NATNDSWDPFYQDQISIVGLMVAR 147 Query: 152 IIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQ-QGIGAWPDAQRVN--FYLAGRA 208 ++ +Y + P NVV H+DIAP RK DPG +FPW QL + GIGAW D +N ++ + Sbjct: 148 MVNQYKVLPHNVVGHSDIAPNRKIDPGVMFPWSQLYKNYGIGAWLDDDEMNETVIISKYS 207 Query: 209 PHTP----VDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHF----RPTLYNGEADA 260 P TP D + L YGY++ ++ + I AF+ HF +P LYN Sbjct: 208 PSTPCPCTPDQKLFVNYLGVYGYNISDEI------KAIKAFKAHFTANQKPKLYNSLITR 261 Query: 261 ETQAIAEALLEKYG 274 AL+ KY Sbjct: 262 LEMYWIWALVAKYS 275 >UniRef50_Q3BNF4 N-acetylmuramoyl-L-alanine amidase n=14 Tax=Xanthomonadaceae RepID=Q3BNF4_XANC5 Length = 268 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 83/274 (30%), Positives = 115/274 (41%), Gaps = 38/274 (13%) Query: 1 MRRFFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYT-ADDFDSS 59 + WL AA L A G + R ++V+H+T S Sbjct: 7 LSSSAWLRAAVCLAALSLGACAHAPQRNPLAQWVPSPNYDTRRPILIVLHFTDQQSVRQS 66 Query: 60 LATLTDK----QVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTS 115 L+TL + +VS+HYL+ + +QLV + + AWH G W T +N S Sbjct: 67 LSTLRGRNSGGRVSAHYLIGE-------DGQRYQLVSDGQRAWHGGAGRWGTITDINSAS 119 Query: 116 IGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKD 175 IGIEL+N G + PF PAQI +L+ L D+ R I +V H D+AP RK+ Sbjct: 120 IGIELDNDGSE---------PFAPAQIDSLLVLLDDLCQRLRIPRTQIVGHEDVAPTRKN 170 Query: 176 DPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTP 235 DPGPLFPW++LA G G W + + LA GY + Sbjct: 171 DPGPLFPWKRLADAGFGRW----------PAADAPAAPEGFDPWQALALIGYSI------ 214 Query: 236 REQRRVIMAFQMHFRPTLYNGEADAETQAIAEAL 269 + + AF H+R DAE I AL Sbjct: 215 DDPAATLQAFHHHYRGNSAT-TLDAEDLRILSAL 247 >UniRef50_B9NMR2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NMR2_9RHOB Length = 227 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 72/226 (31%), Positives = 102/226 (45%), Gaps = 38/226 (16%) Query: 35 RQAQAAYPR-----IKVLVIHYTAD-DFDSSLATLTDK--QVSSHYLVPAVPPRYNGKPR 86 + PR ++V+HYTA D +L L D +VS+HYL+ Sbjct: 12 HPSPNFGPRRDGLKPTLIVLHYTAMHSADDALERLCDPAHEVSAHYLI-------GRDGT 64 Query: 87 IWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALI 146 +WQLV E + AWHAG W G T +N SIGIEL+N G PF Q+ AL Sbjct: 65 LWQLVHEPDRAWHAGAGEWHGQTDINSRSIGIELDNAG---------THPFAAPQMSALD 115 Query: 147 PLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAG 206 L DI+ R++I P+ V+ H+D+AP RK DPGP F WQ+L +Q + A Sbjct: 116 HLLPDIMGRWNIPPQGVIGHSDMAPGRKIDPGPKFDWQRLERQNLAA---------RRGY 166 Query: 207 RAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPT 252 +L G+ E ++ A ++ +RP Sbjct: 167 DDGPRKASPDLFRKLARAAGFSAN---VDDET--LLAAVRLRYRPW 207 >UniRef50_A3VV46 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VV46_9PROT Length = 238 Score = 183 bits (465), Expect = 5e-45, Method: Composition-based stats. Identities = 72/228 (31%), Positives = 103/228 (45%), Gaps = 32/228 (14%) Query: 32 DTRRQAQAAYPRIKVLVIHYTA-DDFDSSLATLTDKQ--VSSHYLVPAVPPRYNGKPRIW 88 ++ P I ++V+HYT + +L L D + VSSHY + RI Sbjct: 10 SPNYSSREGTP-ITLVVLHYTGMPSAEEALDRLRDPEAGVSSHYFI-------EQDGRIV 61 Query: 89 QLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPL 148 +LV E++ A HAG+ AW +N SIGIE+ N+G + + F QI ALI L Sbjct: 62 RLVDEKDRAHHAGLGAWGPVRDVNSASIGIEIVNKGH-----LWGYEDFPDLQIDALIGL 116 Query: 149 AKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLA--QQGIGAWPDAQRVNFYLAG 206 +I R+ + P +AH+D+AP RKDDPG FPW +LA + IG W + Sbjct: 117 MTEIYRRHRLGPLAAIAHSDLAPARKDDPGERFPWDRLAASRLAIGQWHPGEDPPPPDYD 176 Query: 207 RAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLY 254 + L L GY + ++AFQ F P L Sbjct: 177 DS----------LTQLTEIGYGLDRSFPVP----AVLAFQRRFAPRLL 210 >UniRef50_Q1DDM5 N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DDM5_MYXXD Length = 203 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 53/176 (30%), Positives = 90/176 (51%), Gaps = 25/176 (14%) Query: 19 GEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDF-DSSLATLTDKQ--VSSHYLVP 75 + ++ ++R +I +V+H+TA + L+ + + Q VS+HY+V Sbjct: 44 TKPAVINAPSPNQNSR-----GGTKIDTIVMHHTATNNGAGDLSWMRNPQSKVSAHYMV- 97 Query: 76 AVPPRYNGKPRIWQLVPEQELAWHAGISAWRGA-TRLNDTSIGIELENRGWQKSAGVKYF 134 + +I+QLV + + AWHAG G + +N+ SIGIE+ N G K+ Sbjct: 98 ------DRDGKIYQLVGDDKRAWHAGKGELHGVPSDINNRSIGIEIVNDGSGKT------ 145 Query: 135 APFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAP--QRKDDPGPLFPWQQLAQ 188 PF AQ ++L L + +++I +N+V HAD+A RK+DP P F W +L + Sbjct: 146 -PFTEAQYKSLTQLTGYLKQQHNIPMKNIVGHADVAVPKGRKNDPAPNFDWNRLRK 200 >UniRef50_A5UR54 N-acetylmuramoyl-L-alanine amidase, family 2 n=2 Tax=Roseiflexus RepID=A5UR54_ROSS1 Length = 419 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 73/215 (33%), Positives = 110/215 (51%), Gaps = 30/215 (13%) Query: 31 LDTRRQAQAAYPR----IKVLVIHYTADDFDSSLATLTDK--QVSSHYLVPAVPPRYNGK 84 ++T ++ R I ++VIH TA S+LA LT+ +VS+HYL+ + Sbjct: 5 INTSIRSPNYGSRNGRSISMIVIHATAGTVRSALAWLTNPASRVSAHYLI-------DKA 57 Query: 85 PRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQA 144 +I++LVP++ AWHAG +AWRG T +ND S+GIELEN + P+ Q+++ Sbjct: 58 GQIYRLVPDEYAAWHAGRAAWRGETAINDISLGIELENANNGRD-------PYPATQMES 110 Query: 145 LIPLAKDIIARYHIKPENVVAHADIA--PQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNF 202 L+ L +D +A+Y I P+ VV H DIA RK DP FPW +Q DA + Sbjct: 111 LVQLTRDKVAQYRIAPDMVVRHLDIAIPRGRKSDP-AGFPWNDFLRQVFAEPIDALPEH- 168 Query: 203 YLAGRAPHTPVDTASLLELLARYGYDVKPDMTPRE 237 P PV A+L ++L Y + + Sbjct: 169 ------PIPPVRYATLSQMLLHEAYRQVGAVEWSD 197 >UniRef50_A4W6L1 N-acetylmuramoyl-L-alanine amidase, family 2 n=36 Tax=Proteobacteria RepID=A4W6L1_ENT38 Length = 187 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 51/155 (32%), Positives = 71/155 (45%), Gaps = 16/155 (10%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVP 92 + + P I L + A + +VS+H L+ I Q VP Sbjct: 37 SLPPGEFGGPWIDALFTGTIDPNAHPFFAEIAHLRVSAHCLIR-------RDGEIVQYVP 89 Query: 93 EQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDI 152 + AWHAG+S++ G + ND SIGIELE P+ AQ QAL + + + Sbjct: 90 FDKRAWHAGVSSYCGREKCNDFSIGIELEGTD---------TTPYTDAQYQALCAVTRKL 140 Query: 153 IARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLA 187 IA Y +N+ H+DIAP RK DPGP F W + Sbjct: 141 IACYPTISDNITGHSDIAPVRKTDPGPAFDWSRFR 175 >UniRef50_Q093H8 Negative regulator of beta-lactamase expression n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q093H8_STIAU Length = 280 Score = 173 bits (440), Expect = 4e-42, Method: Composition-based stats. Identities = 53/178 (29%), Positives = 82/178 (46%), Gaps = 25/178 (14%) Query: 16 GCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDF-DSSLATLTDK--QVSSHY 72 G + + + R I +V+H+TA + LA + + +VS+HY Sbjct: 118 GSFTKPPVTSAPSPNFNER-----GGKDIDTIVLHHTASNNGAGDLAHMRNPASEVSAHY 172 Query: 73 LVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGA-TRLNDTSIGIELENRGWQKSAGV 131 +V + +I+QLV + + AWHAG S G T +N SIGIE+ N G K+A Sbjct: 173 MV-------DRDGKIYQLVNDSKRAWHAGKSELHGVPTDVNSRSIGIEIVNDGSGKTA-- 223 Query: 132 KYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAP--QRKDDPGPLFPWQQLA 187 F AQ ++L L + + + N+V H D+A RK+DP F W +L Sbjct: 224 -----FTEAQYKSLTQLVGYLKQEHGVPMNNIVGHKDVAVPKGRKNDPASNFDWNRLR 276 >UniRef50_B3SF77 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3SF77_TRIAD Length = 232 Score = 173 bits (438), Expect = 7e-42, Method: Composition-based stats. Identities = 68/234 (29%), Positives = 104/234 (44%), Gaps = 21/234 (8%) Query: 56 FDSSLATLT-DKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDT 114 F S LT +VSSH+L+ K I QLVP + AWHAG S W G +N Sbjct: 3 FKDSYNILTKSDKVSSHFLISE-------KGDIHQLVPLEFKAWHAGESFWSGKNDINQY 55 Query: 115 SIGIELENRGWQ-----KSAGVKYFAPFEPAQIQALIPLAKDIIARYH-IKPENVVAHAD 168 SIGIE+ N+G + V F AL L ++ Y I+ +N++ H+D Sbjct: 56 SIGIEIVNKGMKLKFLNNKVQVLNINTFSNNIYFALAKLICELKKMYPKIQDKNIIGHSD 115 Query: 169 IAPQ--RKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPV-DTASLLELLARY 225 I + RK DPG F W+ L G G + + ++ + + L + L + Sbjct: 116 ITAKNLRKIDPGIAFDWKFLNILGHGIYHEIEKRDNNKIIFKLGDKGQNIELLQKKLKKL 175 Query: 226 GYDVKPDMT-PREQRRVIMAFQMHFRP--TLYNGEADAETQAI-AEALLEKYGQ 275 GY++ + + VI AF +H+ + N + + I +E +LEK Q Sbjct: 176 GYEINYNGLFDKHLANVIFAFNLHYLQHLNITNSQINYGIWDINSEKVLEKITQ 229 >UniRef50_B8GD95 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=3 Tax=Chloroflexus RepID=B8GD95_CHLAD Length = 641 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 61/170 (35%), Positives = 87/170 (51%), Gaps = 25/170 (14%) Query: 33 TRRQAQAAYP-RIKVLVIHYTADDFDSSLATLTD-----KQVSSHYLVPAVPPRYNGKPR 86 TR Q P RI+++V+H TA + L ++VS HY + + Sbjct: 10 TRNNFQPGSPDRIRMIVLHATAGSYPGDFKWLRQGGAPGREVSVHYYITKR-------GQ 62 Query: 87 IWQLVPEQELAWHAGISAW--RGAT--RLNDTSIGIELENRGWQKSAGVKYFAPFEPAQI 142 I+QLV + ++AWHAG+S W G T N+ S+GIELENR + P+ P Q Sbjct: 63 IFQLVADHDIAWHAGVSRWEVDGRTVYGCNEVSLGIELENRNDGRD-------PYPPEQY 115 Query: 143 QALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIG 192 A + L ++++ +YHI P VV H DI+P RK DP FPWQQ + Sbjct: 116 AAALWLVRELVQKYHIPPNQVVRHLDISPGRKTDP-AGFPWQQFLDEVFA 164 >UniRef50_C9R6I7 Protein AmpD n=1 Tax=Aggregatibacter actinomycetemcomitans D11S-1 RepID=C9R6I7_AGGAD Length = 217 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 57/191 (29%), Positives = 80/191 (41%), Gaps = 43/191 (22%) Query: 26 KEGYQLDTRRQAQAAYPR------IKVLVIHYTADD--------------------FDSS 59 K+G+ LD RR + + I +L+IHY + Sbjct: 42 KDGWLLDERRVLSPHFDQRPDPQDISLLIIHYISLPPEQFGGGYIDDFFQGKLDAQAHPY 101 Query: 60 LATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIE 119 ++ +VS+H L+ RI Q V + AWHAG+S + G + ND +IGIE Sbjct: 102 FQEISLLRVSAHCLI-------ERTGRITQYVNFNDRAWHAGLSYFEGREKCNDFAIGIE 154 Query: 120 LENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYH-IKPENVVAHADIAPQRKDDPG 178 LE Q PF Q L L + I+ Y I E +V H D++P RK DPG Sbjct: 155 LEGSNEQ---------PFTTQQYDTLQRLTRQIMQAYPRITKERIVGHCDVSPGRKIDPG 205 Query: 179 PLFPWQQLAQQ 189 F WQ+ Q Sbjct: 206 QYFDWQRYLQH 216 >UniRef50_Q4ZY97 N-acetylmuramoyl-L-alanine amidase, family 2 n=14 Tax=Gammaproteobacteria RepID=Q4ZY97_PSEU2 Length = 182 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 53/184 (28%), Positives = 77/184 (41%), Gaps = 42/184 (22%) Query: 27 EGYQLDTRRQAQAAYPRIKVLVIHYTA--------------------DDFDSSLATLTDK 66 + R + + I +LVIH + D + D Sbjct: 17 PSPNFNARPEGE-----ISLLVIHNISLPPAQFKTGKVQAFFQNQLDIDEHPYFVGIADL 71 Query: 67 QVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQ 126 +VS+H+L+ + Q V + AWHAG+S+++G ND S+GIELE Q Sbjct: 72 RVSAHFLI-------ERDGEVIQFVSCLDRAWHAGVSSFQGREGCNDFSVGIELEGTDDQ 124 Query: 127 KSAGVKYFAPFEPAQIQALIPLAKDIIARYH-IKPENVVAHADIAPQRKDDPGPLFPWQQ 185 PF AQ ALI L + + + I PE + H+D+AP RK DPGP F W + Sbjct: 125 ---------PFTDAQYDALIDLTRQLRQAFEAITPERICGHSDVAPGRKTDPGPCFDWAR 175 Query: 186 LAQQ 189 Sbjct: 176 FRAA 179 >UniRef50_D1WWE1 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=7 Tax=Streptomyces RepID=D1WWE1_9ACTO Length = 519 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 54/235 (22%), Positives = 89/235 (37%), Gaps = 32/235 (13%) Query: 44 IKVLVIHYTADDFDSSLATLTDK--QVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAG 101 + +VIH T + S++ + +VS+HY + + + Q V E++ AWHAG Sbjct: 236 VDKVVIHTTQGSYAGSISWYQNPASKVSAHYTI------RSSDGEVTQSVLEKDTAWHAG 289 Query: 102 ISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIK-- 159 N +S+GIE E V A + A ++ L K + ARY I Sbjct: 290 --------STNSSSVGIEHEGY-------VDNPAWYTEAMYRSSAELTKHLAARYGIPKN 334 Query: 160 PENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAW---PDAQRVNFYLAGRAPHTPVDTA 216 +++ H++ DPGP + W + G D Y ++ T Sbjct: 335 RSHIIGHSEAPGADHTDPGPNWDWNHYMELIDGEPGSGGDGLTFPTYTTQQSGSTGPQVK 394 Query: 217 SLLELLARYGY--DVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQ-AIAEA 268 ++ LL GY + + AFQ R +G +T A+ A Sbjct: 395 AVQTLLNAQGYQAGAADGSFGPTTKGAVQAFQRA-RALEADGTVGPKTWTALLSA 448 >UniRef50_P13016 1,6-anhydro-N-acetylmuramyl-L-alanine amidase ampD n=65 Tax=Gammaproteobacteria RepID=AMPD_ECOLI Length = 183 Score = 167 bits (423), Expect = 4e-40, Method: Composition-based stats. Identities = 49/155 (31%), Positives = 66/155 (42%), Gaps = 16/155 (10%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVP 92 + + P I L A + +VS+H L+ I Q VP Sbjct: 37 SLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIR-------RDGEIVQYVP 89 Query: 93 EQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDI 152 + AWHAG+S ++G R ND SIGIELE + AQ Q L + + + Sbjct: 90 FDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA---------YTDAQYQQLAAVTRAL 140 Query: 153 IARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLA 187 I Y +N+ H DIAP RK DPGP F W + Sbjct: 141 IDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFR 175 >UniRef50_P82974 1,6-anhydro-N-acetylmuramyl-L-alanine amidase ampD n=192 Tax=Proteobacteria RepID=AMPD_CITFR Length = 187 Score = 167 bits (423), Expect = 4e-40, Method: Composition-based stats. Identities = 49/155 (31%), Positives = 68/155 (43%), Gaps = 16/155 (10%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVP 92 + + P I L + A + +VS+H L+ I Q VP Sbjct: 37 SLPPGEFGGPWIDALFTGTIDPNAHPYFAGIAHLRVSAHCLIR-------RDGEIVQYVP 89 Query: 93 EQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDI 152 + AWHAG+S+++G R ND SIGIELE + AQ Q L + + Sbjct: 90 FDKRAWHAGVSSYQGRERCNDFSIGIELEGTDTLA---------YTDAQYQQLAAVTNAL 140 Query: 153 IARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLA 187 I RY N+ H +IAP+RK DPGP F W + Sbjct: 141 ITRYPAIANNMTGHCNIAPERKTDPGPSFDWARFR 175 >UniRef50_C7RNH8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=55 Tax=Proteobacteria RepID=C7RNH8_9PROT Length = 195 Score = 167 bits (422), Expect = 5e-40, Method: Composition-based stats. Identities = 56/180 (31%), Positives = 79/180 (43%), Gaps = 38/180 (21%) Query: 31 LDTRRQAQAAYPRIKVLVIHYTADD--------------------FDSSLATLTDKQVSS 70 + R + + ++VIH + A + +VS+ Sbjct: 24 VSPNRDPRPPGEVVSMIVIHAISLPPARFGGDGIARLFTNRLDPAAHPYFAQIIGLRVSA 83 Query: 71 HYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAG 130 H+LV + Q V +E AWHAG+SAW+G ND S+GIELE Sbjct: 84 HFLVR-------RDGELIQFVSCRERAWHAGLSAWKGRQGCNDFSLGIELEGCDE----- 131 Query: 131 VKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQG 190 +PFE AQ L+ L + A Y I + VV H+DI+P RK DPGP F W++L G Sbjct: 132 ----SPFEDAQYSCLLALVGRLCAGYPI--DAVVGHSDISPGRKTDPGPCFDWRRLGSIG 185 >UniRef50_C6APP4 Protein AmpD n=8 Tax=Gammaproteobacteria RepID=C6APP4_AGGAN Length = 184 Score = 166 bits (421), Expect = 6e-40, Method: Composition-based stats. Identities = 53/177 (29%), Positives = 74/177 (41%), Gaps = 37/177 (20%) Query: 31 LDTRRQAQAAYPRIKVLVIHYT--------------------ADDFDSSLATLTDKQVSS 70 + A+ I +L+IHY A + A ++ +VS+ Sbjct: 20 VSPHFDARPNPQDISLLIIHYISLPPEQFGGSYIDDFFQGKLAPNRHPYFAEISTLRVSA 79 Query: 71 HYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAG 130 H L+ N I Q V + AWHAGIS + G + ND +IGIELE Q Sbjct: 80 HCLI-------NRAGEITQYVNFNDRAWHAGISCFEGREKCNDFAIGIELEGSNEQ---- 128 Query: 131 VKYFAPFEPAQIQALIPLAKDIIARYH-IKPENVVAHADIAPQRKDDPGPLFPWQQL 186 PF Q +L L ++I+ Y I E +V H D++P RK DPG F W Sbjct: 129 -----PFTTQQYVSLQRLTQEIMRAYPLITKERIVGHCDVSPGRKIDPGQYFDWATY 180 >UniRef50_D2AU78 N-acetylmuramoyl-L-alanine amidase n=5 Tax=Bacteria RepID=D2AU78_STRRD Length = 508 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 29/172 (16%) Query: 25 EKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK--QVSSHYLVPAVPPRYN 82 Y + R + A I +VIH T + +++ + QVS+HY+V + Sbjct: 223 SSSNYTVSNRPTSNA----IDRIVIHVTQGSYAGTISWFQNPAAQVSAHYVV------RS 272 Query: 83 GKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQI 142 + Q+V E++ AWHA N S+GIE E V + F A Sbjct: 273 SDGDVTQMVREKDRAWHA--------RDWNSRSVGIEHEGY-------VNDASWFTDAMY 317 Query: 143 QALIPLAKDIIARYHIKPE--NVVAHADIAPQRKDDPGPLFPWQQLAQQGIG 192 ++ L ++I RY I + ++V H ++ DPGP + W + Q G Sbjct: 318 RSSAALTRNIADRYGIPKDRAHIVGHVEVPGNDHTDPGPNWDWTRYMQYVNG 369 >UniRef50_A1K6E1 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Azoarcus sp. BH72 RepID=A1K6E1_AZOSB Length = 286 Score = 163 bits (414), Expect = 4e-39, Method: Composition-based stats. Identities = 53/205 (25%), Positives = 82/205 (40%), Gaps = 43/205 (20%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLATL----TDKQVSSHYLVPAVPPRYNGKPRIW 88 + K +V HYTA + A +++VS+H LV + I Sbjct: 23 SASPNHNGIINPKFVVFHYTACSHADASAAFMNASGNRRVSAHLLV-------DSDGSIT 75 Query: 89 QLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGW----------------------- 125 Q V AWHAG+S W LN SIG+E+ N G+ Sbjct: 76 QFVDFNLRAWHAGVSEWEDYRDLNSHSIGVEIVNYGYLLKNSAGGFTLSNGRSSPFTPAE 135 Query: 126 -------QKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPG 178 +++ +Y+ F P Q++ L + + Y + +V+ H DIAP RK DPG Sbjct: 136 VVEARHRKEAVRHQYWHAFTPEQLETCEALVEVLFDAYAL--SDVLGHDDIAPTRKVDPG 193 Query: 179 PLFPWQQLAQQGIGAWPDAQRVNFY 203 P FP ++ + +G D + V Sbjct: 194 PAFPMDRIKSRAVGRDSDIEMVEAV 218 >UniRef50_A4G8Q1 N-acetylmuramoyl-L-alanine amidase n=4 Tax=Burkholderiales RepID=A4G8Q1_HERAR Length = 185 Score = 163 bits (412), Expect = 8e-39, Method: Composition-based stats. Identities = 54/168 (32%), Positives = 74/168 (44%), Gaps = 24/168 (14%) Query: 49 IHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGA 108 + Y AD + L L +VS+H+L+ + Q V ++ AWHAG S++ G Sbjct: 31 LDYAADPYFEQLKLL---RVSAHFLIR-------RDGNVMQFVSARDRAWHAGASSFCGQ 80 Query: 109 TRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHAD 168 R ND SIGIELE +Q PFE AQ AL L + Y + +V H Sbjct: 81 ERCNDFSIGIELEGTDFQ---------PFEEAQYIALASLTVALKQAYPL--RHVSGHEQ 129 Query: 169 IAPQRKDDPGPLFPWQQ---LAQQGIGAWPDAQRVNFYLAGRAPHTPV 213 IAP RK DPGP F W + L ++ W ++ T Sbjct: 130 IAPGRKTDPGPFFNWTEYQALYRKKYAEWRESAMQKLTEKQLQDRTAP 177 >UniRef50_B8GT21 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GT21_THISH Length = 275 Score = 162 bits (411), Expect = 9e-39, Method: Composition-based stats. Identities = 59/197 (29%), Positives = 89/197 (45%), Gaps = 38/197 (19%) Query: 33 TRRQAQAAYPRIKVLVIHYTAD-DFDSSLATLTDKQV--SSHYLVPAVPPRYNGKPRIWQ 89 + ++LVIH+TA +SS+ + Q S+H ++ + I Q Sbjct: 19 RKSPCHGGKMTPRLLVIHFTAGASAESSINWFLNPQAKASAHLVI-------DRNGHITQ 71 Query: 90 LVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPF------------ 137 +VP +AWHAG S W + LN SIGIEL+N G + G ++ + F Sbjct: 72 MVPFDTVAWHAGASRWNDLSGLNHHSIGIELDNAGRLQPHGDQWRSWFGRDYHDDEVLVA 131 Query: 138 --------------EPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPW 183 QI+ + +A+ + ARY + E++V H DIAP RK DPGP FP Sbjct: 132 RHKHETEPSGWQLYTREQIETTLEVAQCLFARYGL--EDIVGHEDIAPGRKSDPGPAFPM 189 Query: 184 QQLAQQGIGAWPDAQRV 200 L + +G D+ V Sbjct: 190 GALRARLLGRQEDSLPV 206 >UniRef50_B5JVS6 Negative regulator of AmpC, AmpD n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JVS6_9GAMM Length = 206 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 59/199 (29%), Positives = 83/199 (41%), Gaps = 40/199 (20%) Query: 15 AGCAGEKGIVEKEGYQLDTRRQAQAA---YPRIKVLVIH-----------------YT-- 52 +G +G+ D R+ A I +LV+H +T Sbjct: 18 SGWLSGEGVRHVPSPNFDERQVASPHCDEREAIDLLVVHNISLPPNQFGGEGIEQLFTNC 77 Query: 53 -ADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRL 111 + +VS+H LV + Q VP + AWHAG S++ G + Sbjct: 78 LDPSEHPYYEGIYQLKVSAHALVR-------RDGEVVQFVPFHKRAWHAGQSSYCGRDKC 130 Query: 112 NDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYH-IKPENVVAHADIA 170 ND +IGIELE Q PFE Q +AL+ L +I Y + E++V H+DIA Sbjct: 131 NDFAIGIELEGSDDQ---------PFEAEQYRALVALTAQLIQTYPQLSAEHIVGHSDIA 181 Query: 171 PQRKDDPGPLFPWQQLAQQ 189 P RK DPGP F W +Q Sbjct: 182 PGRKTDPGPHFKWADYRKQ 200 >UniRef50_Q65VN8 AmpD protein n=13 Tax=Gammaproteobacteria RepID=Q65VN8_MANSM Length = 190 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 51/177 (28%), Positives = 72/177 (40%), Gaps = 37/177 (20%) Query: 31 LDTRRQAQAAYPRIKVLVIHYTA--------------------DDFDSSLATLTDKQVSS 70 + ++ + I +LVIHY + + T+ +VS+ Sbjct: 22 ISPHFDSRPSQADISLLVIHYISLPPEQFGGGYIEDFFQGKLNPETHPYFQTIYQIRVSA 81 Query: 71 HYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAG 130 H L+ R+ Q V + AWHAG S ++G + ND +IGIELE Q Sbjct: 82 HCLI-------GRDGRVTQFVSFNDRAWHAGESCFQGREKCNDYAIGIELEGSNEQ---- 130 Query: 131 VKYFAPFEPAQIQALIPLAKDIIARYH-IKPENVVAHADIAPQRKDDPGPLFPWQQL 186 PF Q Q L L I Y I + +V H D+AP RK DPG F W + Sbjct: 131 -----PFTEVQYQRLAELTNIIRHYYPKITEDRIVGHCDVAPGRKIDPGQYFEWTKY 182 >UniRef50_D2AQX4 Negative regulator of beta-lactamase expression-like protein n=4 Tax=Actinomycetales RepID=D2AQX4_STRRD Length = 467 Score = 160 bits (406), Expect = 3e-38, Method: Composition-based stats. Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 27/172 (15%) Query: 25 EKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQ--VSSHYLVPAVPPRYN 82 Y +R A A I +VIH T + +++ + VS+HY+V + Sbjct: 222 SSANYTASSRPSAYA----IDRIVIHVTQGSYAGTISWFQNPSASVSAHYVV------RS 271 Query: 83 GKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQI 142 + Q+V ++++AWHAG W N S+GIE E V + F A Sbjct: 272 SDGAVTQMVRDKDVAWHAG--NW----SYNTRSVGIEHEGY-------VSDASWFTDAMY 318 Query: 143 QALIPLAKDIIARYHIKPE--NVVAHADIAPQRKDDPGPLFPWQQLAQQGIG 192 ++ L + I RY I + +++ H + DPGP + W + Q G Sbjct: 319 RSSAALTRHIADRYGIPKDRAHIIGHNQVPGATHTDPGPYWDWNRYMQYVTG 370 >UniRef50_A4A5I4 Anhydro-N-acetylmuramyl-tripeptide amidase n=1 Tax=Congregibacter litoralis KT71 RepID=A4A5I4_9GAMM Length = 196 Score = 160 bits (406), Expect = 3e-38, Method: Composition-based stats. Identities = 47/157 (29%), Positives = 68/157 (43%), Gaps = 17/157 (10%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVP 92 + + ++ L + D S L +VS+H+ + N + + Q V Sbjct: 40 SLPPGRFGGDDVEALFCNTLDCSRDPSFDELRGLEVSAHFFI-------NREGALTQFVS 92 Query: 93 EQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDI 152 + AWHAG+S W ND SIGIELE +Q +E Q L L ++ Sbjct: 93 CHDRAWHAGVSTWGSRVNCNDFSIGIELEGTDYQA---------YEDMQYAMLSSLIGEL 143 Query: 153 IARYH-IKPENVVAHADIAPQRKDDPGPLFPWQQLAQ 188 R + +V H+DIAP RK DPG F W +L Q Sbjct: 144 RCRMPSLARGPIVGHSDIAPGRKTDPGEAFDWNRLRQ 180 >UniRef50_A8PNB6 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=Rickettsiella grylli RepID=A8PNB6_9COXI Length = 406 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 52/154 (33%), Positives = 75/154 (48%), Gaps = 15/154 (9%) Query: 134 FAPFEPAQIQALIPLAK-------DIIAR------YHIKPENVVAHADIAPQRKDDPGPL 180 + + Q L+ L + II Y I P+ ++ H+D+AP RK DPGP Sbjct: 208 WDDYTDHQYDTLVKLIEENIKPAMAIIDEESEHSYYQIPPQFILGHSDVAPGRKIDPGPR 267 Query: 181 FPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPRE-QR 239 W++LA++ IGAWPD V +D + + L YGYD+ E + Sbjct: 268 L-WKKLAERNIGAWPDEAEVCAIEQAITLEHGIDYKWIQDALGHYGYDINSTGQFDEQTQ 326 Query: 240 RVIMAFQMHFRPTLYNGEADAETQAIAEALLEKY 273 VI +FQMHF P Y+G T ++ EALL+KY Sbjct: 327 NVIRSFQMHFEPENYSGTPSVRTISLLEALLKKY 360 Score = 130 bits (327), Expect = 5e-29, Method: Composition-based stats. Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 5/130 (3%) Query: 38 QAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKP-RIWQLVPEQEL 96 + R + +V+HYTA D SL TLT +S+H+LVP P + + + ++LV + Sbjct: 11 RNFDKRQRFIVLHYTAFDEKDSLETLTRGGLSAHFLVPKQPFKVDEESYDYYKLVDINDR 70 Query: 97 AWHAGISAWRGATRLNDTSIGIELENRGWQ--KSAGVKYFAPFEPAQIQALIPLAKDIIA 154 AWHAG S ++G LND SIGIE+ N G+ + +G F AQ++ I + + A Sbjct: 71 AWHAGCSHFKGRESLNDNSIGIEIVNYGFGLVQDSGEIVFTYQIEAQLKTFI--VETLKA 128 Query: 155 RYHIKPENVV 164 ++ + +V Sbjct: 129 QHEPVYQQLV 138 >UniRef50_UPI0000D5333F negative regulator of AmpC, AmpD n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D5333F Length = 196 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 84/194 (43%), Gaps = 41/194 (21%) Query: 21 KGIVEKEGYQLDTRRQAQAAYPRIKVLVIH------------YTADDFDSSLAT------ 62 K + D RR Q +++VIH Y D F +SL T Sbjct: 23 KNVEYLNSPNQDDRRDGQD----PEIIVIHGISLPPGEYGGSYVCDLFLNSLDTSVCEYF 78 Query: 63 --LTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIEL 120 ++ +VSSH + N R+ Q VP AWHAG SA+RG N SIGIEL Sbjct: 79 KEISTLKVSSHLFI-------NRLGRVMQFVPFNSRAWHAGESAYRGREMCNHFSIGIEL 131 Query: 121 ENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYH-IKPENVVAHADIAPQRKDDPGP 179 E + + + Q L + + Y I ++V H+DIAP+RK DPGP Sbjct: 132 EGQDNDE---------YSDIQYVILAKIINALFEFYPRISARDIVGHSDIAPKRKTDPGP 182 Query: 180 LFPWQQLAQQGIGA 193 F W++L ++ G Sbjct: 183 AFNWKRLYREISGQ 196 >UniRef50_Q0AC58 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=7 Tax=Gammaproteobacteria RepID=Q0AC58_ALHEH Length = 186 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 54/158 (34%), Positives = 69/158 (43%), Gaps = 17/158 (10%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVP 92 + P I L + D A + +VS H L+ + Q VP Sbjct: 42 SLPPGAFGGPWIDRLFTNRLPADAHPYFARVHRLRVSCHLLIR-------RDGALTQYVP 94 Query: 93 EQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDI 152 AWHAG S G R ND +IGIELE P+ AQ Q L PL + + Sbjct: 95 LHRRAWHAGQSRLAGRERCNDFAIGIELEGTDE---------TPYTEAQYQVLGPLCRTL 145 Query: 153 IARYH-IKPENVVAHADIAPQRKDDPGPLFPWQQLAQQ 189 +A + I PE VV H+D+AP RK DPGP F W +L Sbjct: 146 MAAFPGITPERVVGHSDVAPGRKTDPGPAFDWARLRAA 183 >UniRef50_B2JH28 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=51 Tax=Proteobacteria RepID=B2JH28_BURP8 Length = 212 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 59/178 (33%), Positives = 82/178 (46%), Gaps = 21/178 (11%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLAT-LTDKQVSSHYLVPAVPPRYNGKPRIWQLV 91 + + P I L ++ D L D +VS+H+++ + Q V Sbjct: 52 SLPPNEFGGPGITDLFLNRLDCDAHPYYDAHLRDVRVSAHFVIR-------RDGALEQYV 104 Query: 92 PEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKD 151 E AWHAG S + G R ND SIGIELE +PFE AQ L PL + Sbjct: 105 SCDERAWHAGASNFFGRERCNDFSIGIELEGSD---------ASPFERAQYATLAPLVRS 155 Query: 152 IIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAP 209 + A Y I +++ H+DIAP RK DPGP F W +L ++ A PD + + R P Sbjct: 156 LAAHYEI--DSLAGHSDIAPGRKTDPGPHFEWPRLQRE--TALPDQYFPYLHPSSRKP 209 >UniRef50_Q46X31 N-acetylmuramoyl-L-alanine amidase, family 2 n=13 Tax=Proteobacteria RepID=Q46X31_RALEJ Length = 203 Score = 160 bits (405), Expect = 4e-38, Method: Composition-based stats. Identities = 55/201 (27%), Positives = 75/201 (37%), Gaps = 42/201 (20%) Query: 7 LVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTA------------- 53 + A+ L D R + ++V+H + Sbjct: 8 PIPASFLPDAEGWVPAARRVPSPNFDERPAGMP----VDLVVLHNISLPPGQFGSGDIEA 63 Query: 54 -------DDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWR 106 D AT+ QVS+H+LV + Q VP + AWHAG S + Sbjct: 64 FFQNRLDPDRHPFFATIHQVQVSAHFLVR-------RDGELVQFVPCTKRAWHAGQSDFF 116 Query: 107 GATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAH 166 G +R ND S+GIE+E PF AQ L K + A + V H Sbjct: 117 GRSRCNDFSVGIEIEGTDDL---------PFTAAQYTTTSTLVKALRA--TLPVRAVAGH 165 Query: 167 ADIAPQRKDDPGPLFPWQQLA 187 +DIAP RK DPGP F W + A Sbjct: 166 SDIAPGRKTDPGPHFDWDRFA 186 >UniRef50_B4RX52 N-acetylmuramoyl-L-alanine amidase, putative n=2 Tax=Alteromonas macleodii RepID=B4RX52_ALTMD Length = 315 Score = 160 bits (404), Expect = 6e-38, Method: Composition-based stats. Identities = 58/193 (30%), Positives = 83/193 (43%), Gaps = 39/193 (20%) Query: 29 YQLDTRRQAQAAYPRIKVLVIHYTADD-FDSSLATLTDKQ--VSSHYLVPAVPPRYNGKP 85 + +VIH+TA DSS+ LT+ + VS+H+ Sbjct: 26 FTASPNTSGAFQTGAPDTIVIHFTAGSSLDSSVNVLTNAESGVSAHF-------ALGRNG 78 Query: 86 RIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAG--------------- 130 I Q++P ++ WHAG S ++G + LN SIGIEL+N G K G Sbjct: 79 DIVQMLPTNKIGWHAGKSHYKGRSGLNRYSIGIELDNAGQLKPRGDGTYESWFGNVYRES 138 Query: 131 ------------VKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPG 178 + Y+ + QI + I L K + Y I VV H +IAP RK DPG Sbjct: 139 EVIAAQHPNQSVLGYWHKYTDIQIASTISLCKVLCEHYPI--SVVVGHDEIAPSRKVDPG 196 Query: 179 PLFPWQQLAQQGI 191 P FP Q+ +Q + Sbjct: 197 PAFPMHQIREQVL 209 >UniRef50_D2BEW5 Negative regulator of beta-lactamase expression-like protein n=2 Tax=Streptosporangium roseum DSM 43021 RepID=D2BEW5_STRRD Length = 480 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 29/168 (17%) Query: 25 EKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK--QVSSHYLVPAVPPRYN 82 Y + +R I +VIH T + +++ + QVS+HY+V + Sbjct: 220 NSGNYAVSSRPSGDV----IDRIVIHVTQGSYAGTISWFQNPAAQVSAHYVV------RS 269 Query: 83 GKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQI 142 + Q+V E+ A+HAG N S+GIE E V + F A Sbjct: 270 SDGDVTQMVREKNRAFHAG--------SFNRRSVGIEHEGY-------VDNASWFTDAMY 314 Query: 143 QALIPLAKDIIARYHIKPE--NVVAHADIAPQRKDDPGPLFPWQQLAQ 188 ++ L ++I RY I + ++V H + DPGP + W + Q Sbjct: 315 RSSAALTRNIADRYGIPKDRAHIVGHHQVPGTDHTDPGPNWNWTKYMQ 362 >UniRef50_Q12NJ5 N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Shewanella denitrificans OS217 RepID=Q12NJ5_SHEDO Length = 272 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 55/199 (27%), Positives = 79/199 (39%), Gaps = 38/199 (19%) Query: 22 GIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADD-FDSSLATLTDKQV--SSHYLVPAVP 78 G K+ + + +VIHYT ++ L + Q S+H ++ Sbjct: 4 GHKLKDIPFYASPNVGEVMIAPPSAVVIHYTGGSTLAGAVEWLINPQAKASAHVVIGEA- 62 Query: 79 PRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPF- 137 I QLVP ++AWHAG S ++G + N SIGIEL N G G ++ A F Sbjct: 63 ------GDIVQLVPFNQVAWHAGKSHYQGRSNFNRFSIGIELVNPGQLTLVGQQHCAWFG 116 Query: 138 -------------------------EPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQ 172 AQI A+ L + Y I +V H +I+P Sbjct: 117 DPYPQERVVKIPQKDSIQEAVWCAYTQAQIIAVKRLLLMLKEYYPINL--LVGHDEISPG 174 Query: 173 RKDDPGPLFPWQQLAQQGI 191 RK DPGP FP L + + Sbjct: 175 RKRDPGPAFPMAPLRRTVL 193 >UniRef50_C5TMG7 Protein AmpD n=4 Tax=Neisseriaceae RepID=C5TMG7_NEIFL Length = 199 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 50/180 (27%), Positives = 73/180 (40%), Gaps = 38/180 (21%) Query: 32 DTRRQAQAAYPRIKVLVIHYTA--------------------DDFDSSLATLTDKQVSSH 71 + I ++V+H + D + + +VSSH Sbjct: 33 SPNFSPREPDEDISLVVLHNISLPPFEYNTGAVENLFTNQINPDEHPFFSIIHTLRVSSH 92 Query: 72 YLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGV 131 + + + K Q V ++A+HAG+S+++G + N SIGIELE Sbjct: 93 FFI-------SRKGETVQFVSCDDMAYHAGVSSFQGREKCNAFSIGIELEGCD------- 138 Query: 132 KYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGI 191 F PF AQ +L L I Y I+ V H DIAP RK DPG F W +L + G Sbjct: 139 --FEPFTEAQYTSLQALLTAISEHYPIQA--VTGHQDIAPDRKTDPGHFFDWPRLQKAGF 194 >UniRef50_A1TKH5 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=Acidovorax RepID=A1TKH5_ACIAC Length = 209 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 58/178 (32%), Positives = 77/178 (43%), Gaps = 38/178 (21%) Query: 32 DTRRQAQAAYPRIKVLVIHYTAD--------------------DFDSSLATLTDKQVSSH 71 + A I ++V+H + D A + QVS+H Sbjct: 35 SPNFGPRPAQAAIDLIVVHSISLPPGEYGTGEVQRLFTNALDWDAHPYYAGIRGLQVSAH 94 Query: 72 YLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGV 131 + + R+WQ V + AWHAG SA+RG ND SIGIELE Sbjct: 95 FFI-------ERGGRLWQFVDCGDRAWHAGPSAYRGRDNCNDDSIGIELEGLEGDT---- 143 Query: 132 KYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQ 189 FEPAQ QAL L +DI RY + +V H +AP RK DPGP F W++L + Sbjct: 144 -----FEPAQYQALATLCRDIAQRYPV--AHVAGHEHVAPGRKRDPGPGFDWRELRSR 194 >UniRef50_A8FQB8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=22 Tax=Gammaproteobacteria RepID=A8FQB8_SHESH Length = 205 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 73/189 (38%), Gaps = 42/189 (22%) Query: 26 KEGYQLDTRRQAQAAYP-----RIKVLVIH------------YTADDFDSSLAT------ 62 +G+ D RR + + +LVIH Y F L Sbjct: 30 ADGWINDARRCESPHFNHRPLNEVSLLVIHNISLPAGCFGESYIDQLFKGCLDVSADASF 89 Query: 63 --LTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIEL 120 L +VS+H+L+ + Q V + AWHAG+S++ ND +IGIEL Sbjct: 90 IDLKGLEVSAHFLIR-------RDGELVQYVSCGDRAWHAGVSSYGSREGCNDFAIGIEL 142 Query: 121 ENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYH-IKPENVVAHADIAPQRKDDPGP 179 E + Q + L L + Y + + VV H DIAP RK DPG Sbjct: 143 EGTDTLA---------YTEQQYRELKILTLALFDAYPMLNIDRVVGHCDIAPGRKTDPGE 193 Query: 180 LFPWQQLAQ 188 F WQ+ + Sbjct: 194 SFDWQRFKK 202 >UniRef50_B1XX10 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=5 Tax=Proteobacteria RepID=B1XX10_LEPCP Length = 209 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 67/214 (31%), Positives = 89/214 (41%), Gaps = 46/214 (21%) Query: 13 LLAGCAGEKGIVEKEGYQLDTRR-QAQAAYPR-----IKVLVIHYTADD----------- 55 + GC + G+ D RR + R I + V+H + Sbjct: 1 MTPGCGMRRSGAWSRGWHRDARRVPSPNFGSRPVGASIDLAVVHSISLPPGVYGGDAIER 60 Query: 56 ---------FDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWR 106 ATL QVS+H+++ + Q V +E AWHAG S+WR Sbjct: 61 FFTNRLDPAAHPYFATLAGLQVSAHFVIR-------RDGELLQFVDVRERAWHAGASSWR 113 Query: 107 GATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAH 166 G + ND S+GIELE Q+ FEPAQ + L L +D AR VV H Sbjct: 114 GRSNCNDHSLGIELEGLEGQR---------FEPAQYRVLAGLLRD--ARTAWPLREVVGH 162 Query: 167 ADIAPQRKDDPGPLFPWQQLAQQGIGA--WPDAQ 198 IAP RK DPG F W +LA+ GA W A+ Sbjct: 163 EHIAPGRKHDPGAGFDWCRLARHLRGARLWVPAE 196 >UniRef50_B0VMP8 N-acetyl-anhydromuramyl-L-alanine amidase (Regulates ampC) n=25 Tax=Proteobacteria RepID=B0VMP8_ACIBS Length = 189 Score = 157 bits (396), Expect = 5e-37, Method: Composition-based stats. Identities = 51/177 (28%), Positives = 69/177 (38%), Gaps = 36/177 (20%) Query: 32 DTRRQAQAAYPRIKVLVIH------------YTADDFDSSLAT--------LTDKQVSSH 71 + A I+++V+H Y F + L + QVS+H Sbjct: 22 SPNFNQRPAGTEIQMIVVHNISLPPSQFGGGYIEQFFQNKLDWSVHPYFQTIEGMQVSTH 81 Query: 72 YLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGV 131 L+ + Q V + AWHAG S++ ND SIGIELE Sbjct: 82 LLIL-------RTGEVLQFVNFNDRAWHAGRSSYLAKIECNDYSIGIELEGSDDL----- 129 Query: 132 KYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQ 188 PFE Q + L + I Y ++ H+DIAP RK DPGP F WQ Q Sbjct: 130 ----PFEDLQYEVLTDVVTAIRQAYPEIKNHIAGHSDIAPGRKTDPGPYFKWQHFRQ 182 >UniRef50_A8FVJ2 Negative regulator of beta-lactamase expression-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FVJ2_SHESH Length = 259 Score = 157 bits (396), Expect = 5e-37, Method: Composition-based stats. Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 14/206 (6%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDF-DSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLV 91 R + + + I +VIH TA ++ T +++ S+H+++P +G IW +V Sbjct: 61 ARSRGRDVFESIDTIVIHATAGYATKHAVDTWKERKASAHWIIPDENEAEHGH-FIWAMV 119 Query: 92 PEQELAWHAG----ISAWRGATRLNDTSIGIELENRGWQKSAGVKYFA-PFEPAQIQALI 146 E + A+H G S +ND S+G+EL N + V+YF P+ QI L Sbjct: 120 AESKAAYHVGNVDYASILGEGLNVNDRSLGVELVN-----TQNVQYFRDPYSQWQIDMLA 174 Query: 147 PLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAG 206 + A+Y ++V++HA + P R+ DPG FPW+ + + +R Sbjct: 175 RIVLYAWAKYP-NLKHVISHAKLDPARRSDPGENFPWEAFKHKVLSQSVLNERHPLVFET 233 Query: 207 RAPHTPVDTASL-LELLARYGYDVKP 231 A DT SL L + R G+ +P Sbjct: 234 SASSVTSDTDSLNLAVTTRAGHCCEP 259 >UniRef50_A5WCS6 N-acetylmuramoyl-L-alanine amidase, family 2 n=3 Tax=Psychrobacter RepID=A5WCS6_PSYWF Length = 206 Score = 156 bits (394), Expect = 8e-37, Method: Composition-based stats. Identities = 52/195 (26%), Positives = 73/195 (37%), Gaps = 42/195 (21%) Query: 20 EKGIVEKEGYQLDTRRQAQAAYPRIKVLVIH------------------YTADDFDSSLA 61 E G++ + + + I +VIH Y F ++L Sbjct: 20 ESGLLTQADWLPSPNYNQRPESCEISAIVIHNISLPPNEFGQTNKQGLHYVKALFTNTLD 79 Query: 62 T--------LTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLND 113 + +VS+H + +I QLV + AWHAG S++ G ND Sbjct: 80 WDAHPYFKSIEGMEVSAHLFI-------ERSGQITQLVNFENRAWHAGRSSYLGRPECND 132 Query: 114 TSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQR 173 SIGIELE +Q F Q AL + I Y ++ H+DIAP R Sbjct: 133 YSIGIELEGSDFQA---------FTAEQYTALSSVIAAIYKAYPKTRRHLTGHSDIAPGR 183 Query: 174 KDDPGPLFPWQQLAQ 188 K DPG F W L Sbjct: 184 KTDPGEYFEWDTLRD 198 >UniRef50_D0RN01 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RN01_9RICK Length = 159 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 64/172 (37%), Positives = 89/172 (51%), Gaps = 24/172 (13%) Query: 23 IVEKEGYQLDTRRQAQAAYPRIKVLVIHYTAD-DFDSSLATLTD--KQVSSHYLVPAVPP 79 I +K D + RIK ++IHYT D S++ L +VS HYL+ Sbjct: 5 ITQKPSENFD-----KLKDRRIKYVIIHYTGMRDQKSAIKRLQSKVAKVSCHYLI----- 54 Query: 80 RYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEP 139 + +++Q+V + ++AWHAG S W LN SIGIEL N+G++ F Sbjct: 55 --SRGGKVYQMVQDLDVAWHAGKSKWGKDINLNSKSIGIELVNKGFES---------FPN 103 Query: 140 AQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGI 191 QI ALI + K + +Y IKP V+ H DI+P RK DPGP FPW+ L I Sbjct: 104 KQILALIKILKILKKKYKIKPSYVLGHEDISPGRKTDPGPKFPWKILYNHKI 155 >UniRef50_C8PWQ1 Protein AmpD n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PWQ1_9GAMM Length = 219 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 81/209 (38%), Gaps = 42/209 (20%) Query: 5 FWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTA----------- 53 W++ ++++G + E+G++ + + I ++VIH + Sbjct: 12 IWMIGRGMVMSGFSIEQGLLSPCEFVASPNFGQRPDPNDIHLIVIHNISLPPSEFGLKNN 71 Query: 54 ---------------DDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAW 98 AT+ +QVS+H + I Q V AW Sbjct: 72 QGEHFVRAFFQNQLDPKAHPYFATIYQQQVSAHLFI-------ERDGSITQFVSFDARAW 124 Query: 99 HAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHI 158 HAG S++ G ND SIGIELE + + F+ Q QAL + I Y Sbjct: 125 HAGKSSYLGVPNCNDYSIGIELEGDDYSE---------FDDRQYQALSGVIAAIYQAYPK 175 Query: 159 KPENVVAHADIAPQRKDDPGPLFPWQQLA 187 ++ H+DIA RK DPG F W +L Sbjct: 176 TVNHLAGHSDIARGRKSDPGLYFDWVKLR 204 >UniRef50_D0J795 N-acetylmuramyl-L-alanine amidase, negative n=9 Tax=Proteobacteria RepID=D0J795_COMTE Length = 209 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 58/178 (32%), Positives = 73/178 (41%), Gaps = 38/178 (21%) Query: 32 DTRRQAQAAYPRIKVLVIHYTAD--------------------DFDSSLATLTDKQVSSH 71 + A +I ++VIH + D + +VSSH Sbjct: 28 SPNFGPRPADAQIDLVVIHSISLPPGQYGTGAVQQLFTNQLDWDAHPYYQGIRGLEVSSH 87 Query: 72 YLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGV 131 + + + IWQ V + AWHAG+S WRG R ND SIGIELE Sbjct: 88 FFIT-------RQGEIWQFVSCDDRAWHAGVSQWRGRERCNDDSIGIELEGLEGLS---- 136 Query: 132 KYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQ 189 FE Q QAL L I A Y + + H IAP RK DPGP F WQ+L Q Sbjct: 137 -----FEAPQYQALQQLCMAIAAHYPV--RYIAGHEHIAPGRKQDPGPGFDWQRLQLQ 187 >UniRef50_B3QXY2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QXY2_CHLT3 Length = 288 Score = 154 bits (389), Expect = 3e-36, Method: Composition-based stats. Identities = 54/189 (28%), Positives = 78/189 (41%), Gaps = 38/189 (20%) Query: 32 DTRRQAQAAYPRIKVLVIHYTAD-DFDSSLATLT--DKQVSSHYLVPAVPPRYNGKPRIW 88 + + +VIHYTA D SS+ TL D + S+H ++ I+ Sbjct: 21 TPNHSGTFSAGKADTIVIHYTAGRDARSSVQTLCSPDLKASAHLVI-------GRNGEIY 73 Query: 89 QLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPF----------- 137 QL P + WHAG S W + LN SIGIE++N G G +Y + F Sbjct: 74 QLAPFDRITWHAGKSNWHERSGLNQFSIGIEIDNAGRLTKQGTEYLSWFGKSYAANEVFS 133 Query: 138 ---------------EPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFP 182 AQI + + + + Y IK ++ H +I+P RK DPGP FP Sbjct: 134 GVHRHEQTLSFWHRYTEAQILLVEEICRLLRQVYDIK--EILGHEEISPGRKTDPGPAFP 191 Query: 183 WQQLAQQGI 191 L + Sbjct: 192 LDVLRNHVL 200 >UniRef50_D1SAT8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1SAT8_9ACTO Length = 516 Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats. Identities = 44/224 (19%), Positives = 77/224 (34%), Gaps = 30/224 (13%) Query: 25 EKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQV--SSHYLVPAVPPRYN 82 Y + +R A I +VIH + S++ + S+HYL+ + Sbjct: 225 NSSNYTVSSRESAYP----INYIVIHTMQGSYAGSISWFQNAAAGTSAHYLL------RS 274 Query: 83 GKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQI 142 + Q+V ++++AWHAG W N SIGIE E V + + A Sbjct: 275 SDGAVTQMVRDKDIAWHAG--NW----TYNTQSIGIEHEGY-------VDSASWYTDAMY 321 Query: 143 QALIPLAKDIIARYHIK--PENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRV 200 ++ L + + +Y I N++ H + DPGP + W Q G Sbjct: 322 RSSAALTRFLCDKYGIPKTRNNIIGHNQVPGATHTDPGPNWNWTYYMQLVTGG---TTPP 378 Query: 201 NFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMA 244 + +T + + Y + + A Sbjct: 379 PTTWSTVVDNTTAGRFTASANWSTSTYSAQRYGADYRYANPVAA 422 >UniRef50_B3R6P0 N-acetyl-anhydromuranmyl-L-alanine amidase n=3 Tax=Betaproteobacteria RepID=B3R6P0_CUPTR Length = 205 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 53/188 (28%), Positives = 73/188 (38%), Gaps = 42/188 (22%) Query: 21 KGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTA--------------------DDFDSSL 60 D R + ++V+H + D Sbjct: 24 PAARRVPSPNFDARPDGMP----VDLVVLHNISLPPGQFGSGDIEAFFQNRLDPDKHPFF 79 Query: 61 ATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIEL 120 AT+ QVS+H+LV + Q VP + AWHAG S + G R ND SIGIE+ Sbjct: 80 ATIHQIQVSAHFLVTRS-------GELVQFVPCTQRAWHAGQSEFFGRARCNDFSIGIEI 132 Query: 121 ENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPL 180 E PF AQ L + + A Y ++ + H+DIAP RK DPGP Sbjct: 133 EGTDDV---------PFTAAQYNTTAALVRALRAAYPVQA--IAGHSDIAPGRKTDPGPH 181 Query: 181 FPWQQLAQ 188 F W + A+ Sbjct: 182 FDWNRFAR 189 >UniRef50_D0LQ75 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=4 Tax=Myxococcales RepID=D0LQ75_HALO1 Length = 551 Score = 150 bits (379), Expect = 5e-35, Method: Composition-based stats. Identities = 51/187 (27%), Positives = 72/187 (38%), Gaps = 30/187 (16%) Query: 14 LAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK--QVSSH 71 LA V + ++R P ++VIH + S + LT+ VS+H Sbjct: 225 LAAGPDYADSVWRPSPNYNSRPSGSIGDP--AMVVIHTCEGSYSSCWSWLTNSASGVSAH 282 Query: 72 YLVPAVPPRYNGKPRIWQLVPEQELAWHAGIS----------AWRGATRLNDTSIGIELE 121 Y+V +I QLV E + AWH G S WR N +IGIE Sbjct: 283 YVVNE------SGSQISQLVRESQRAWHIGASYQCSNNSSVDCWRNGYSSNHFTIGIEH- 335 Query: 122 NRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPE--NVVAHADIAPQRKDDPGP 179 G + F QI A L DI I + ++V+H + P + DPGP Sbjct: 336 -------GGFASQSSFPSGQIDASARLVCDITRDQGIPRDRYHIVSHGQLQPYNRTDPGP 388 Query: 180 LFPWQQL 186 +PW Sbjct: 389 NWPWTTY 395 >UniRef50_Q1ARF9 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ARF9_RUBXD Length = 496 Score = 148 bits (375), Expect = 1e-34, Method: Composition-based stats. Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 23/149 (15%) Query: 44 IKVLVIHYTADDFDSSLATLTD--KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAG 101 I +VIH T + S++ D QVS+HY V + +I Q V E ++AWHAG Sbjct: 222 INRIVIHVTQGSWSSAINWFKDGRAQVSAHYTV------RSSDGKIGQSVREADIAWHAG 275 Query: 102 ISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIK-- 159 W N SIGIE E QK F A ++ LA + +Y I Sbjct: 276 --NW----DYNTHSIGIEHEGYVSQK-------RWFTDAMYRSSARLAAYLCKKYRIPID 322 Query: 160 PENVVAHADIAPQRKDDPGPLFPWQQLAQ 188 ++++ H + DPGP + W + + Sbjct: 323 RKHIIGHNQVPGADHTDPGPYWNWDRYMR 351 >UniRef50_A4SVB0 N-acetylmuramoyl-L-alanine amidase, family 2 n=4 Tax=Proteobacteria RepID=A4SVB0_POLSQ Length = 225 Score = 148 bits (375), Expect = 1e-34, Method: Composition-based stats. Identities = 59/213 (27%), Positives = 89/213 (41%), Gaps = 45/213 (21%) Query: 19 GEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTA------------------------D 54 E+G + ++ + A+ +LVIH+ + Sbjct: 34 DEQGWLGFAQWRESPNQDARPENIEPDLLVIHHISLPPGEFKAQDSSQYIIDFFQNRLDP 93 Query: 55 DFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDT 114 + A + ++VSSH+L+ R+ Q V + AWHAG+S++ G + ND Sbjct: 94 NRHPYFAEIEGQKVSSHFLITRS-------GRLIQFVSTKHKAWHAGLSSFLGREKCNDF 146 Query: 115 SIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRK 174 SIGIELE G PFE Q + L + A Y H+DIAP+RK Sbjct: 147 SIGIELEGDGE---------TPFEEIQYKVLSETVGKLSATY--PSLQFAGHSDIAPERK 195 Query: 175 DDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGR 207 DPG F W++ Q+ G D ++ F LA R Sbjct: 196 TDPGISFDWKRF-QKETGLSLD--KLPFGLASR 225 >UniRef50_A6GR52 Putative anhydro-N-acetylmuramyl-tripeptide amidase, AmpD (Negative regulator of AmpC) n=1 Tax=Limnobacter sp. MED105 RepID=A6GR52_9BURK Length = 187 Score = 148 bits (375), Expect = 1e-34, Method: Composition-based stats. Identities = 49/138 (35%), Positives = 67/138 (48%), Gaps = 18/138 (13%) Query: 54 DDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLND 113 +S L VSSH+L+ + + Q V ++ AWHAGISA + N Sbjct: 60 CHSHASFGELIGLHVSSHFLI-------DRDGSVTQFVSCEKRAWHAGISAAMDRSNFNH 112 Query: 114 TSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQR 173 SIGIEL + PFE Q +L LA ++ ARY +K +AH++IAP R Sbjct: 113 FSIGIELLG---------DIYTPFEQTQYASLKRLALELQARYPLK--YAMAHSEIAPTR 161 Query: 174 KDDPGPLFPWQQLAQQGI 191 K DPGP F W+ L + Sbjct: 162 KTDPGPFFDWKGLRKSNT 179 >UniRef50_D1CGY2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CGY2_THET1 Length = 638 Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 51/174 (29%), Positives = 80/174 (45%), Gaps = 29/174 (16%) Query: 44 IKVLVIHYTADDFDSSLATLT-DKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGI 102 I+ +VIH T + S+L+T T VS+HYL+ + + QLVP +++AW AG Sbjct: 271 IQYIVIHDTEGSYASALSTFTSQSYVSAHYLI------RSSDGLVTQLVPTKDVAWQAG- 323 Query: 103 SAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPE- 161 W +N SIGIE E V+ + ++ L + + AR+HI + Sbjct: 324 -NW----YVNIHSIGIEHEG------FAVEGATWYTEQMYRSSARLVRYLAARFHIPLDR 372 Query: 162 -NVVAHADIAP------QR-KDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGR 207 +++ H D+ R DPGP + W +G P +QR + AGR Sbjct: 373 AHILGHDDVPGPGPAYQGRMHWDPGPYWDWAHYM-ALLGIAPRSQRAHGVTAGR 425 >UniRef50_A1AXT9 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=Proteobacteria RepID=A1AXT9_RUTMC Length = 174 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 47/178 (26%), Positives = 72/178 (40%), Gaps = 38/178 (21%) Query: 30 QLDTRRQAQAAYPRIKVLVIHYTA--------------------DDFDSSLATLTDKQVS 69 Q+++ + I ++VIH + ++ D +VS Sbjct: 12 QINSPNFNKRPNQAISLIVIHSISLPPGKFNNNHIEKFFTNQLDTSQHPYFKSIKDLKVS 71 Query: 70 SHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSA 129 +H L+ I Q VP + AWHAG S ++G ND SIGIEL+ Sbjct: 72 AHLLIK-------RNGMIIQFVPFNQRAWHAGKSNYKGKHNCNDFSIGIELQGDDNTS-- 122 Query: 130 GVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLA 187 +E Q + L + + + Y I + H+DI+P RK DPGP F W +L Sbjct: 123 -------YELVQYKVLNNVIDLLKSHYPIST--IKGHSDISPIRKTDPGPYFKWSKLH 171 >UniRef50_A0L5K2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=Proteobacteria RepID=A0L5K2_MAGSM Length = 183 Score = 143 bits (360), Expect = 7e-33, Method: Composition-based stats. Identities = 52/158 (32%), Positives = 69/158 (43%), Gaps = 23/158 (14%) Query: 33 TRRQAQAAYPRIKVL---VIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQ 89 + Q I L V+ AD + +A+L +V++H+L+ I Q Sbjct: 31 SLPPGQFGGGWIDDLFMGVLDAQADPYFVGIASL---RVAAHFLI-------GRDGGITQ 80 Query: 90 LVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLA 149 VP + WHAG S W+G R ND SIG+ELE PF Q Q L L Sbjct: 81 YVPLSKRGWHAGESVWQGRPRCNDFSIGVELEG---------DEEHPFAAIQYQRLAQLT 131 Query: 150 KDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLA 187 + + R + VV H DIAP RK DPG F W + Sbjct: 132 RTLQQRLP-RLVEVVGHQDIAPGRKWDPGRQFDWPRFR 168 >UniRef50_D2PZI0 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PZI0_9ACTO Length = 455 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 43/196 (21%), Positives = 75/196 (38%), Gaps = 25/196 (12%) Query: 32 DTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK--QVSSHYLVPAVPPRYNGKPRIWQ 89 T I +VIH T + +++ + QVS+HY++ + ++ Q Sbjct: 226 STSNYRVGRTAAISTIVIHVTQGSYTGTISWFKNPASQVSAHYVI------RSSDGQVTQ 279 Query: 90 LVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLA 149 +V E++ AWHA N ++GIE E V + F A ++ L Sbjct: 280 MVAEKDTAWHA--------RSTNPYTVGIEHEG-------WVDQPSWFTDAMYRSSAALT 324 Query: 150 KDIIARYHIKPE--NVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGR 207 + I R I + ++ H ++ DPGP + W Q G P + + R Sbjct: 325 RSIADRRGIPKDRAHIRGHNELPDNDHTDPGPNWNWTYYMQLVNGGTPTSNFTTYGSGVR 384 Query: 208 APHTPVDTASLLELLA 223 +A ++ LA Sbjct: 385 VRSDARLSAPIVTTLA 400 >UniRef50_A6T2C3 Negative regulator of beta-lactamase expression n=2 Tax=Oxalobacteraceae RepID=A6T2C3_JANMA Length = 211 Score = 142 bits (358), Expect = 1e-32, Method: Composition-based stats. Identities = 49/157 (31%), Positives = 68/157 (43%), Gaps = 18/157 (11%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVP 92 + Q P I L ++ + D L +VS+H+L+ + Q V Sbjct: 51 SLPPGQFGGPFIADLFLNRLDYEADPYFDQLRPLRVSAHFLIR-------RDGTVMQFVS 103 Query: 93 EQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDI 152 + AWHAG S++ G R ND SIGIELE ++ F Q AL L + Sbjct: 104 ANDRAWHAGASSFCGQERCNDFSIGIELEGTDFEA---------FADEQYAALAALTVAL 154 Query: 153 IARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQ 189 A Y + +V H IAP RK DPGP F W ++ Sbjct: 155 KAAYPLL--HVTGHEHIAPGRKTDPGPFFDWAGYEER 189 >UniRef50_C4DNA4 Negative regulator of beta-lactamase expression n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DNA4_9ACTO Length = 330 Score = 142 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 42/200 (21%), Positives = 74/200 (37%), Gaps = 31/200 (15%) Query: 26 KEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK--QVSSHYLVPAVPPRYNG 83 K Y +R ++ I +VIH + A + +V++HYLV + Sbjct: 48 KANYTNASRPKSDP----INKVVIHTMQGTASGTKAWFRNPKSEVTTHYLVSS------S 97 Query: 84 KPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQ 143 K + Q+V E ++AWHAG W N TSIGIE E + + Sbjct: 98 KGSVTQMVHESDIAWHAG--NW----DYNKTSIGIEHEGYVQDPK------KWYTTNMYE 145 Query: 144 ALIPLAKDIIARYHIK--PENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVN 201 + L + I RY+I ++++AH+++ DPG + W + + Sbjct: 146 SSARLVRSICDRYNIPMDRKHIIAHSEVPGATHTDPGKGWNWDRYMDL-----VRESKTQ 200 Query: 202 FYLAGRAPHTPVDTASLLEL 221 + + + Sbjct: 201 SFSMDNDSAGVSASDAWQRA 220 >UniRef50_C0R4G3 N-acetylmuramoyl-L-alanine amidase, family 2 n=9 Tax=Wolbachia RepID=C0R4G3_WOLWR Length = 525 Score = 140 bits (354), Expect = 4e-32, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 100/251 (39%), Gaps = 47/251 (18%) Query: 21 KGIVEKEGYQLDTRRQAQAAY---PRIKVLVIHYTADD-FDSSLATLTDKQVSSHYLVPA 76 + +++ LD ++ ++++H+T + TL + +S H++V Sbjct: 74 PLLKDQDLLFLDPASALNYGDRAGKKVLMVIVHHTETSTLKGTKDTLNARGLSVHFIV-- 131 Query: 77 VPPRYNGKPRIWQLVPEQELAWHAGISAWRGATR--------LNDTSIGIELENRGWQKS 128 + I +VP ++ AWHAGIS R LN+ S+GIE+ N G Sbjct: 132 -----DRDGNITLMVPLEKEAWHAGISYARVKVDSKLEELRKLNNYSVGIEIVNTG---- 182 Query: 129 AGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIA----------PQRKDDPG 178 PF Q++++ L ++ R+ IK + + +H++I RK DP Sbjct: 183 -----LEPFPEEQMRSVKELILYLMERFKIKRDMIFSHSEIGTIVYDPELGYTMRKPDPH 237 Query: 179 PLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTAS-------LLELLARYGYDVKP 231 LF W+ L + IG + + T L + L R+ Y ++P Sbjct: 238 KLFDWELLEKNEIGLHISDRINPKDAKHKMGKTLYKAGDRNEGILKLKQRLNRFFYKIEP 297 Query: 232 DMTPREQRRVI 242 ++ VI Sbjct: 298 --WNDKKGNVI 306 >UniRef50_A6GDD4 Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GDD4_9DELT Length = 574 Score = 137 bits (346), Expect = 3e-31, Method: Composition-based stats. Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 28/175 (16%) Query: 29 YQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQ--VSSHYLVPAVPPRYNGKPR 86 ++ + ++++IH + + L++ Q VS+HY++ N Sbjct: 228 WRGSPNYSNRPGGTNPEMVIIHSCEGSYSGCWSWLSNSQAGVSAHYVIN------NSGSE 281 Query: 87 IWQLVPEQELAWHAGIS----------AWRGATRLNDTSIGIELENRGWQKSAGVKYFAP 136 + QLV E + AWH G S + + N+ +IGIE Q S Sbjct: 282 VSQLVRENKKAWHIGASYNCSLNNSTKCNKNGSSSNNFTIGIEHAGYANQAS-------- 333 Query: 137 FEPAQIQALIPLAKDIIARYHIKPE--NVVAHADIAPQRKDDPGPLFPWQQLAQQ 189 + I L DI + I + ++VAH + P + DPGP +PW Q Sbjct: 334 WSNGLITTSAELVCDITQAWGIPRDQYHIVAHGTLQPYNRIDPGPNWPWANYLAQ 388 >UniRef50_Q92IC3 Putative N-acetylmuramoyl-L-alanine amidase RC0497 n=9 Tax=Rickettsia RepID=Y497_RICCN Length = 267 Score = 137 bits (346), Expect = 3e-31, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 97/258 (37%), Gaps = 33/258 (12%) Query: 18 AGEKGIVEKEGYQLDTRRQAQAAYPRIK------VLVIHYTADDFDSSLATLTDKQVSSH 71 + +E G + PR + V++ + + D + L ++ S H Sbjct: 1 MSKSKAIENNGISNTNSPNGKYMAPRPEGVKPTCVVITYSVSKDIKAVREVLDERGASVH 60 Query: 72 YLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGV 131 Y++ + + + A++AG S+W+G +N IG+ L N Sbjct: 61 YIIDKDGTQKEYHNDLT------DQAFYAGKSSWKGEVGVNKFGIGVMLINDAK------ 108 Query: 132 KYFAPFEPAQIQALIPLAKDIIARYHI--KPENVVAHADIAPQRKDD----PGPLFPWQQ 185 + F QI L KD+ RY ++V ++ R+ + PG FPW++ Sbjct: 109 ---SDFPAEQIGKLKEFLKDVTERYPNLDLKHDLVGLGEVTVNREGNAHIAPGSKFPWKE 165 Query: 186 LAQQGIGAWPD-AQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPRE-QRRVIM 243 LA+ G G + + Q L T +L E L YGY V+ T + ++ + Sbjct: 166 LAEAGFGRYFETTQEQKSKLLLSLDSTGEKVNTLQENLKEYGYGVESTSTFDQFTQQAVR 225 Query: 244 AFQMHFRPTLYNGEADAE 261 F + G + E Sbjct: 226 VFNDRY----GTGLPNEE 239 >UniRef50_Q8ES14 Putative uncharacterized protein OB0830 n=1 Tax=Oceanobacillus iheyensis RepID=Q8ES14_OCEIH Length = 234 Score = 137 bits (345), Expect = 4e-31, Method: Composition-based stats. Identities = 51/233 (21%), Positives = 89/233 (38%), Gaps = 53/233 (22%) Query: 1 MRRFFWLVAAALLLAGCAGE----------------KGIVEKEGYQLDTRRQAQAAYPR- 43 + + +++ A L C E V E +D + + PR Sbjct: 4 LWKISFVIVALFFLVACKQEVTKDTLEVAAKEEKVESVEVNFEEKMIDMYLPEENSEPRD 63 Query: 44 --IKVLVIHYTAD---------DFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVP 92 + +++H++++ + D VS+HY++ + I++ V Sbjct: 64 SLVTHVMLHFSSNVIEKPEDPFQVEDIYKVFHDYGVSTHYVI-------DRTGEIYRFVS 116 Query: 93 EQELAWHAGISAWRG----ATRLNDTSIGIELENRGWQKSAGVKYFAP-----------F 137 E A+HAG G +N SIGIEL G ++ + Sbjct: 117 EDRNAYHAGEGKIEGVPKYENNMNRYSIGIELLAIGTKEEMMPMMSPELYDTISSKHIGY 176 Query: 138 EPAQIQALIPLAKDIIARYH---IKPENVVAHADIAPQRKDDPGPLFPWQQLA 187 Q AL L DI +R+H + +++ H + AP+RK DPG LF W++L Sbjct: 177 TDKQYDALQDLLIDISSRHHKLKLNRNHIIGHQEYAPERKTDPGALFDWERLM 229 >UniRef50_B5HCN0 Secreted protein n=3 Tax=Streptomyces RepID=B5HCN0_STRPR Length = 895 Score = 137 bits (344), Expect = 6e-31, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 73/182 (40%), Gaps = 29/182 (15%) Query: 17 CAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQV--SSHYLV 74 C G + T I+ +VIH T +D SLA LT+ V S+HYL+ Sbjct: 250 CNFVPSRTSSTGKRNYTLGDRPNQGVDIRQIVIHDTEGGYDGSLAALTNPDVPGSAHYLI 309 Query: 75 PAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYF 134 A + Q++ + LAWHAG W N +IG+E E ++ Sbjct: 310 RA------SDGLVTQMIENKHLAWHAG--NW----THNMHAIGVEHEGYAIKEG------ 351 Query: 135 APFEPAQIQALIPLAKDIIARYHIK--PENVVAHADIAPQR-------KDDPGPLFPWQQ 185 + Q Q+ L K + +Y++ E+++ H ++A Q D GP + W Sbjct: 352 KWYTEPQYQSSADLVKFLATKYNVPLDREHIIGHDEVALQTDAGMANLHWDAGPYWDWNH 411 Query: 186 LA 187 Sbjct: 412 YM 413 >UniRef50_B5GAH2 Amidase n=15 Tax=Streptomyces RepID=B5GAH2_9ACTO Length = 200 Score = 136 bits (343), Expect = 7e-31, Method: Composition-based stats. Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 23/155 (14%) Query: 38 QAAYPRIKVLVIHYTADDFDSSLATLTDK--QVSSHYLVPAVPPRYNGKPRIWQLVPEQE 95 + + ++ +VIH T + F +LA + QV++HY+V + + Q V E++ Sbjct: 60 RPSQYPVEYVVIHVTQEYFTDTLAIFQNPAKQVTAHYVVRSA------DGHLAQCVREKD 113 Query: 96 LAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIAR 155 +AWHAG W N SIGIE E V F A +A L + R Sbjct: 114 VAWHAG--NW----DYNTRSIGIEHEG-------WVDRPEYFTDAMFEASAALTASVCER 160 Query: 156 YHIK--PENVVAHADIAPQRKDDPGPLFPWQQLAQ 188 Y + E+++ H ++ DPG L+ W + + Sbjct: 161 YGVPKDREHILGHVEVPGTDHTDPGALWDWTKYLR 195 >UniRef50_C9N2Y5 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9N2Y5_9ACTO Length = 443 Score = 136 bits (343), Expect = 8e-31, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 80/192 (41%), Gaps = 32/192 (16%) Query: 8 VAAALLLAGCAGEKGIVEKEGY-QLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK 66 +A + A +K+ Y DT + +K +V+H T D+D++L + Sbjct: 42 LACDWVPAAYQQTGDPEDKDTYGNYDTAN--RPDSNAVKFIVLHDTEVDYDTTLKIFQNP 99 Query: 67 --QVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRG 124 Q S+HY+V + + Q+V +++AW AG W LN SIGIE E Sbjct: 100 ANQTSAHYVVRSA------DGHVTQMVKNKDVAWQAG--NW----YLNTHSIGIEQEG-- 145 Query: 125 WQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPE--NVVAHADIAP----QRKD--- 175 + + ++ L + + A+Y I + +++ H + P K+ Sbjct: 146 ----VAAEGATWYTSEMYRSTARLVRYLAAKYDIPLDRQHILGHDGVPPTSAAGTKNMHW 201 Query: 176 DPGPLFPWQQLA 187 DPGP + W + Sbjct: 202 DPGPYWDWNRFM 213 >UniRef50_B3QCK8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Rhodopseudomonas palustris TIE-1 RepID=B3QCK8_RHOPT Length = 464 Score = 134 bits (338), Expect = 3e-30, Method: Composition-based stats. Identities = 56/241 (23%), Positives = 86/241 (35%), Gaps = 58/241 (24%) Query: 24 VEKEGYQLDTRRQAQAAYPRI-KVLVIHYTADDFDS--SLATL-----TDKQVSSHYLVP 75 + ++G ++ ++ P + KV+V+H TA S+ L + S+H ++ Sbjct: 10 IYRDGKAVNFQQTKNIGGPIVPKVIVLHDTAGHLHGRDSIVWLRGGPGQSQNSSAHVVI- 68 Query: 76 AVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENR------------ 123 I QL WHAGIS WRG LN ++GIE+ N Sbjct: 69 ------GRDGTITQLAAFNVKTWHAGISNWRGRANLNGWAVGIEIVNPGGPLRTLGNGRY 122 Query: 124 ---------------------------GWQKSAGVKYFAPFEPAQIQALIPLAKDIIARY 156 G Y+ P QI A++ L + ++A Y Sbjct: 123 QGIDLIDTKADPSLKVRPGVFPPLTPDGKAVPRTAGYWLEHSPEQIDAVVELCRALVAAY 182 Query: 157 HIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTA 216 E +V H IAP RK D PLFP ++ ++ WP VD Sbjct: 183 PTITE-IVTHWMIAPTRKVDTNPLFPIDEVRRR---VWPARLVSPVAKFADLDDEAVDAI 238 Query: 217 S 217 + Sbjct: 239 A 239 >UniRef50_Q1QZ97 Negative regulator of AmpC, AmpD n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZ97_CHRSD Length = 197 Score = 133 bits (334), Expect = 8e-30, Method: Composition-based stats. Identities = 49/161 (30%), Positives = 63/161 (39%), Gaps = 21/161 (13%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVP 92 + + I+ L + AT+ +VS+H L+ Q V Sbjct: 37 SLPPGRFGGDAIERLFTNRLDPAAHPYFATIHALRVSAHVLIR-------RDGEAVQFVG 89 Query: 93 EQELAWHAGISAW----RGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPL 148 AWHAG S W R LND SIGIELE + AQ + L + Sbjct: 90 FDRRAWHAGRSRWWDGHRERRELNDFSIGIELEG---------DEIHAYREAQYRCLARV 140 Query: 149 AKDIIARYH-IKPENVVAHADIAPQRKDDPGPLFPWQQLAQ 188 + ARY + V +HA IAP RK DPGP F W Q Sbjct: 141 FLALHARYPALTLARVTSHARIAPLRKTDPGPAFDWAYFRQ 181 >UniRef50_B3ZYJ5 N-acetylmuramoyl-L-alanine amidase, putative n=1 Tax=Bacillus cereus 03BB108 RepID=B3ZYJ5_BACCE Length = 246 Score = 131 bits (329), Expect = 3e-29, Method: Composition-based stats. Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 34/179 (18%) Query: 35 RQAQAAYPRIKVLVIHYTAD---------DFDSSLATLTDKQVSSHYLVPAVPPRYNGKP 85 + ++ I ++IH+ ++ + + + D +S+HYL+ + Sbjct: 72 KNSKVRTEPITHVLIHFMSNAVAKPKDPYNVKDAYNSFLDNGLSAHYLI-------DRNG 124 Query: 86 RIWQLVPEQELAWHAGI---SAWRGATR-LNDTSIGIELENRGWQKSAGVKYFAP----- 136 ++QLV E +A+HAG S + T LN+ SIGIEL G K + Sbjct: 125 VVYQLVNENRVAYHAGKGSISNYPEYTNKLNEYSIGIELLGIGTWKEMEIMMSRDTYDLI 184 Query: 137 ------FEPAQIQALIPLAKDIIARYHI---KPENVVAHADIAPQRKDDPGPLFPWQQL 186 + Q ++L L +DI R E+++ H + A RK DPG LF W ++ Sbjct: 185 SPHNIGYTDVQYKSLKLLLEDIRKRNQNIQNDREHILGHDEYAKDRKTDPGSLFDWSKV 243 >UniRef50_D1XLT9 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Streptomyces sp. ACTE RepID=D1XLT9_9ACTO Length = 444 Score = 130 bits (328), Expect = 4e-29, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 32/192 (16%) Query: 8 VAAALLLAGCAGEKGIVEKEGY-QLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK 66 +A + A +KE Y DT + ++ +V+H T D+D++L D Sbjct: 43 LACDWVPAAYRQTGDPADKEAYGNYDTA--DRPRSNAVEFIVLHDTEVDYDTTLKIFQDP 100 Query: 67 --QVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRG 124 + S+HY+V + + Q+V +++AW AG W LN SIGIE E Sbjct: 101 ANKTSAHYVVRSA------DGHVTQMVKNKDVAWQAG--NW----YLNTHSIGIEQEG-- 146 Query: 125 WQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPE--NVVAHADIAPQR-------KD 175 + + A ++ L + + A Y I + +++ H + P Sbjct: 147 ----VAAEGAKWYTDAMYRSTARLVRHLAAVYDIPLDRQHILGHDGVPPTSAAGTQNMHW 202 Query: 176 DPGPLFPWQQLA 187 DPGP + W + Sbjct: 203 DPGPYWDWNRFM 214 >UniRef50_A9AXU4 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AXU4_HERA2 Length = 748 Score = 129 bits (325), Expect = 8e-29, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 69/185 (37%), Gaps = 29/185 (15%) Query: 45 KVLVIHYTADDFDSSLATLTDK--QVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGI 102 + ++IH T + ++ + S+HY++ A I Q+V + + WHAG Sbjct: 272 RYILIHDTEITYTQTVNVFQNPATGASTHYVIRA------SDGHIAQMVENKNVPWHAG- 324 Query: 103 SAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPE- 161 W +N SIGIE E + + + A QA L + + +Y I + Sbjct: 325 -NW----DVNGHSIGIEHEGIAIEGA------TWYSEAMYQASAQLTRYLADKYQIPLDR 373 Query: 162 -NVVAHADIAP-------QRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPV 213 +++ H ++ DPGP + W G + L P+ Sbjct: 374 SHIIGHDELPGPLPQHQAGMHWDPGPFWDWAHYMDLVRGGPAPISNPDPQLVTINPNFDS 433 Query: 214 DTASL 218 + +L Sbjct: 434 NMPAL 438 >UniRef50_C9LCL1 N-acetylmuramoyl-L-alanine amidase CwlL n=2 Tax=Clostridiales RepID=C9LCL1_RUMHA Length = 469 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 73/179 (40%), Gaps = 26/179 (14%) Query: 27 EGYQLDTRRQAQAAYPRIKVLVIHYT----ADDFDSSLATLTDKQVSSHYLVPAVPPRYN 82 GY + + + RIK +VIHY + + ++ S+HY V Sbjct: 8 SGYNFN-----KGSISRIKYIVIHYVGALGGAEDNCRYYGGGNRNASAHYFVGFN----- 57 Query: 83 GKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAP--FEPA 140 +WQ V + +AWH G S+++ A N SIGIE+ R + FE A Sbjct: 58 --GEVWQCVEDANIAWHCGASSYKHAECRNANSIGIEMCVRKKNTKSMGATDKDWYFEDA 115 Query: 141 QIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLF------PWQQLAQQGIGA 193 ++A L + ++ +Y + +V+ H D+ K P P W + ++ G Sbjct: 116 TVEAAAELTRYLMNKYGVPASHVIRHYDVTG--KICPNPYVYNTSAHTWDEFKRKISGQ 172 >UniRef50_C5T4Q5 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4Q5_ACIDE Length = 230 Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats. Identities = 52/170 (30%), Positives = 75/170 (44%), Gaps = 19/170 (11%) Query: 30 QLDTRRQAQAAYPRIKVLVIHYTADDFDS---SLATLTDKQVSSHYLVPAVPPRYNGKPR 86 + T+R Y I+ +VIH TA S S+ D S H+LVP +G Sbjct: 36 RCTTKRSVDPIYG-IRAVVIHATAGTSSSGAISVMKRRDDPASFHWLVPDEDEAQHGH-L 93 Query: 87 IWQLVPEQELAWHAGISAWR-----GATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQ 141 +W PE AWH +A GA R+N S+GIE+ N PF Q Sbjct: 94 VWACAPEALAAWHVRNAASHPDVNGGAGRVNHWSLGIEVVNAQKND--------PFSDWQ 145 Query: 142 IQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGI 191 I+A + + A+Y ++VV+HA + P R+ DPG F W + + Sbjct: 146 IEATARIVRYCWAKYP-NLKHVVSHAKLDPGRRSDPGEHFDWLRFKSLVL 194 >UniRef50_A4WS28 N-acetylmuramoyl-L-alanine amidase, family 2 n=2 Tax=Rhodobacteraceae RepID=A4WS28_RHOS5 Length = 290 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 49/207 (23%), Positives = 80/207 (38%), Gaps = 46/207 (22%) Query: 44 IKVLVIHYTA-----DDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAW 98 +++++H TA + LA+ + VS H++V + Q VP A Sbjct: 25 PEIVILHDTASRITKGSAATYLASAPN-GVSVHFVVEI-------DGTVVQQVPTNRRAG 76 Query: 99 HAGISAWRGATRLNDTSIGIELENRG----------------------------WQKSAG 130 HAG S++ G T ND SIGIE+ N G G Sbjct: 77 HAGKSSFHGRTGCNDFSIGIEIVNPGRMTRLSDAQCAAWYGETFATNLFGIREVETPQHG 136 Query: 131 VKYFAPFEPAQIQALIPLAKDIIARYHIKP-ENVVAHADIAPQRKDDPGPLFPWQQLAQQ 189 + P+ AQ+ A++ L + + I ++ H ++P RK D PLFP + + + Sbjct: 137 RGLWMPYPEAQMTAVLDLLRSLFD--GIPTLRDITTHWYVSPGRKVDTNPLFPLEHVRAR 194 Query: 190 GIGA--WPDAQRVNFYLAGRAPHTPVD 214 +G DA+ F A + Sbjct: 195 ILGRDDPADAEAEAFSEAVKPTARDPR 221 >UniRef50_A5GTP3 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Synechococcus sp. RCC307 RepID=A5GTP3_SYNR3 Length = 297 Score = 125 bits (313), Expect = 2e-27, Method: Composition-based stats. Identities = 50/191 (26%), Positives = 79/191 (41%), Gaps = 34/191 (17%) Query: 19 GEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTD------KQVSSHY 72 GE+ ++ +G ++D P V+V+H T S++ T T Q S H Sbjct: 121 GERVHLDAQGQRID---------PTPAVIVLHETVYSLGSAINTFTTPHPNDADQASYHT 171 Query: 73 LVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGA---------TRLNDTSIGIELENR 123 LV K I Q+V + A+ AG SA+ G LN+ ++ + LE Sbjct: 172 LV-------GQKGEIVQVVDPSKRAYGAGHSAFDGRWVFTSKHFSGSLNNFALHVSLETP 224 Query: 124 GWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQR-KDDPGPLFP 182 ++ K+ + PAQ AL + D + RY I+P + H + + DP F Sbjct: 225 PDGATSAQKHSG-YTPAQYDALSRVLADWMVRYKIEPHAITTHRHVDLGNARSDP-RSFD 282 Query: 183 WQQLAQQGIGA 193 WQQL + Sbjct: 283 WQQLQTRLTAL 293 >UniRef50_B8FYR6 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=5 Tax=Desulfitobacterium hafniense RepID=B8FYR6_DESHD Length = 242 Score = 124 bits (311), Expect = 4e-27, Method: Composition-based stats. Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 28/167 (16%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK--QVSSHYLVPAVPPRYNGKPRIWQL 90 RQ ++ ++ ++ H TA + L+ + + Q SSHYLV RI QL Sbjct: 10 NYRQGRSGN-QVFAIINHITAGRYPGCLSWMQNPASQASSHYLVLK-------DGRILQL 61 Query: 91 VPEQELAWHAG---ISAWR--GATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQAL 145 V +++ AWHAG W+ N +IGIE E + AQ Q+ Sbjct: 62 VKDEDTAWHAGLVNKPNWKLYNGKNPNLYTIGIEHEALEGEGL---------TDAQYQST 112 Query: 146 IPLAKDIIARYH-IKP--ENVVAHADI-APQRKDDPGPLFPWQQLAQ 188 + L ++A++ IKP ++++ H + R +DPG FPW+QL + Sbjct: 113 LWLHGQLLAKFPAIKPDSDHIIGHYRTDSVNRPNDPGAKFPWEQLFK 159 >UniRef50_D2Q0D6 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Kribbella flavida DSM 17836 RepID=D2Q0D6_9ACTO Length = 638 Score = 124 bits (311), Expect = 4e-27, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 63/160 (39%), Gaps = 26/160 (16%) Query: 38 QAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELA 97 + +I +++H T + +L + D V + +IWQ V +++A Sbjct: 264 RPETGKINYIIVHDTETSWQGTLRLVQDP-----TYVSWQYTMRSSDGQIWQHVKAKDVA 318 Query: 98 WHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYH 157 WHAG W +N SIGIE E + + A + L + + ++ Sbjct: 319 WHAG--NW----YMNMHSIGIEHEGY------AAQGATWYTEALYRNSARLVRYLAEKHD 366 Query: 158 IKPE--NVVAHADIAP-------QRKDDPGPLFPWQQLAQ 188 I + +++ H +I DPGP + W++ + Sbjct: 367 IPLDRAHIIGHDEIPGTLPTTVAGMHWDPGPYWDWERYFE 406 >UniRef50_D1X7T3 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=19 Tax=Streptomyces RepID=D1X7T3_9ACTO Length = 249 Score = 123 bits (309), Expect = 6e-27, Method: Composition-based stats. Identities = 38/161 (23%), Positives = 68/161 (42%), Gaps = 24/161 (14%) Query: 32 DTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK--QVSSHYLVPAVPPRYNGKPRIWQ 89 + RR + + ++IH T F S++ D Q ++HY+V R+ Q Sbjct: 89 NWRRADRPDDFPVDRVIIHVTQGSFASAVKVFQDPAHQAATHYIV-------GQDGRVVQ 141 Query: 90 LVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLA 149 ++ E ++A+ AG A+ N+ ++GIE E V A + L Sbjct: 142 MIRELDVAYQAGNRAY------NERAVGIEHEG-------FVDRPKDLTKAMYASSARLT 188 Query: 150 KDIIARYHIK--PENVVAHADIAPQRKDDPGPLFPWQQLAQ 188 I AR+ I E+++ H ++ DPGP + W + + Sbjct: 189 ASICARHGIPVDREHIIGHVEVPGTDHTDPGPHWDWDRYME 229 >UniRef50_C9Y7L0 1,6-anhydro-N-acetylmuramyl-L-alanine amidase ampD n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y7L0_9BURK Length = 196 Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats. Identities = 50/164 (30%), Positives = 67/164 (40%), Gaps = 29/164 (17%) Query: 50 HYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQE-----------LAW 98 H + +F A+ V H + ++PP G P + QL W Sbjct: 39 HVPSPNFGPRPASAVVDLVVIHSI--SLPPGVYGGPEVQQLFTNTLDWDAHPXXXXXXXW 96 Query: 99 HAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHI 158 HAG S +R ND SIGIELE + F P Q ++L L + I Y I Sbjct: 97 HAGKSCYRDRDHCNDDSIGIELEGTEEDR---------FTPPQYESLHRLCRAIAQNYQI 147 Query: 159 KPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNF 202 + + H IAP RK DPGP F W +L WP+ +F Sbjct: 148 --QYLAGHEHIAPGRKTDPGPGFEWSELK-----LWPEISGWHF 184 >UniRef50_C0WQZ5 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC n=3 Tax=Lactobacillus RepID=C0WQZ5_LACBU Length = 604 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 38/160 (23%), Positives = 65/160 (40%), Gaps = 29/160 (18%) Query: 38 QAAYPRIKVLVIHYTADDFDSSLATL--TDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQE 95 + +I +VIH T FD + T S++Y++ + + + ++V Q Sbjct: 239 PSDGLKINYIVIHNTETTFDEATNLFASTPSYTSANYVISSE------QGTVAEMVRPQN 292 Query: 96 LAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIAR 155 +AWHAG W +N SIGIE E + A Q+ L K + A+ Sbjct: 293 VAWHAG--NW----YINSHSIGIEHEGYAAVGG------YWYTEAMYQSSAALVKYLAAK 340 Query: 156 YHIKPE--NVVAHADIAPQR-------KDDPGPLFPWQQL 186 Y+I + +++ H ++ DPG + WQ Sbjct: 341 YNIPLDRQHIIGHDNVPGLTPAAQKTMHWDPGTYWNWQHY 380 >UniRef50_UPI0001B539A2 amidase n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B539A2 Length = 638 Score = 119 bits (299), Expect = 9e-26, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 74/197 (37%), Gaps = 31/197 (15%) Query: 16 GCAGEKGIVEKEGYQLDTRRQA-QAAYPRIKVLVIHYTADDFDSSLATLTDKQVSS-HYL 73 C +K G QA + +I +VIH T +DS L ++ HY Sbjct: 249 ACESAPAPFQKIGDSYGNYDQADRPHDQKIDYIVIHDTEGTWDSVLKQAQTPGQTAWHYT 308 Query: 74 VPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKY 133 V + ++ Q VP +++ WHAG W LN+ S+GIE E Q + Sbjct: 309 V------RSSDGQVAQHVPTKDVGWHAG--NW----YLNEKSLGIEHEGFAAQGT----- 351 Query: 134 FAPFEPAQIQALIPLAKDIIARYHIKPE--NVVAHADIAPQR-------KDDPGPLFPWQ 184 F A + L + + R+ + + +++ H ++ DPGP + W Sbjct: 352 --WFTEAMYRQSAKLVRYLAHRFGVPLDRAHILGHDNVPGPNADKIKSMHWDPGPYWDWA 409 Query: 185 QLAQQGIGAWPDAQRVN 201 +GA + Sbjct: 410 HYFDL-LGAPLEHDGAP 425 >UniRef50_Q9FC03 Putative secreted amidase n=2 Tax=Streptomyces RepID=Q9FC03_STRCO Length = 642 Score = 117 bits (294), Expect = 3e-25, Method: Composition-based stats. Identities = 39/156 (25%), Positives = 65/156 (41%), Gaps = 30/156 (19%) Query: 43 RIKVLVIHYTADDFDSSLATLTDK--QVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHA 100 RI +VIH +D+ +A L + S+HY+ + + Q+VP +++A+HA Sbjct: 268 RIDTIVIHDLESTYDAGVAGLANPTNPASTHYV-------MSSSGAVTQMVPTKDIAFHA 320 Query: 101 GISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKP 160 G N SIGIE E +A + +Q QA L K + R+ + Sbjct: 321 G------NYSTNLHSIGIEHEGFAAHGAA------WYTESQYQATADLVKYLAERFGVPL 368 Query: 161 E--NVVAHADIAP-------QRKDDPGPLFPWQQLA 187 + +V+ H ++A DPG + W Sbjct: 369 DRQHVIGHDNVAGPNSALVAGMHWDPGYAWDWNHFM 404 >UniRef50_A6GHP2 Putative amidase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHP2_9DELT Length = 454 Score = 113 bits (284), Expect = 4e-24, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 54/155 (34%), Gaps = 26/155 (16%) Query: 45 KVLVIHYTADDFDSSLATLTDK--QVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGI 102 + +H + + + VS+H++V + + Q+V + AWH G Sbjct: 54 DYITVHTVQGSYTGCQSWFQNPAANVSAHFVV------RSDDGEVTQMVELADRAWHVGG 107 Query: 103 SAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIK--P 160 S N +IGIE E + A + + L + I Sbjct: 108 S--------NAYAIGIEHEG-------WIDEPAWYTWEMYVSSSQLTRWTADELDIPKNR 152 Query: 161 ENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWP 195 +++V H ++ Q DPG + W L + W Sbjct: 153 DHIVGHVELPNQSHTDPGIHWNWD-LYMALVNDWV 186 >UniRef50_UPI00016C05EA N-acetylmuramoyl-L-alanine amidase n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C05EA Length = 197 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 30/156 (19%) Query: 24 VEKEGYQLDTRRQAQAAYP--RIKVLVIHY------TADDFDSSLATLTDKQVSSHYLVP 75 V K Y LD ++ +P +I +V+HY TA++ +LT++ SSHY+V Sbjct: 31 VPKILYPLDPNPMSRPGFPMEKISGIVVHYVNNPGSTAENNRDYFNSLTERYASSHYIVG 90 Query: 76 AVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFA 135 + I VPE+E+A+HAG +N + IGIE+ + F Sbjct: 91 L-------QGEIILCVPEEEVAYHAG------NRNVNYSHIGIEVCHP--------DTFG 129 Query: 136 PFEPAQIQALIPLAKDIIARYHIKPE-NVVAHADIA 170 F +LI L K + +Y + P+ +V+ H D+ Sbjct: 130 KFSDITYNSLIDLTKQLCRKYKLNPQTDVIRHYDVT 165 >UniRef50_B6BVD5 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=beta proteobacterium KB13 RepID=B6BVD5_9PROT Length = 134 Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats. Identities = 31/100 (31%), Positives = 42/100 (42%), Gaps = 16/100 (16%) Query: 55 DFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDT 114 D + D +VS+H+L+ + Q V + AWHAG S+++G ND Sbjct: 22 DAHPYFKEIKDLKVSAHFLIK-------RNGELIQFVSCNDRAWHAGESSYQGKENCNDF 74 Query: 115 SIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIA 154 SIGIELE PFE Q LI L + Sbjct: 75 SIGIELEGDDE---------TPFEDDQYIKLIELLGCLKK 105 >UniRef50_A0Q0S8 N-acetylmuramoyl-L-alanine amidase cwlL (Cellwall hydrolase) (Autolysin) n=7 Tax=Clostridiales RepID=A0Q0S8_CLONN Length = 431 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 26/148 (17%) Query: 38 QAAYPRIKVLVIHYTADDFDSSLATLT-----DKQVSSHYLVPAVPPRYNGKPRIWQLVP 92 ++ IK +V+H T + D++LA ++ S+HY V + I Q+V Sbjct: 166 HSSGNNIKFIVMHDTGNYKDTALANANYFGGGNRNASAHYFVD--------ENNIVQVVE 217 Query: 93 EQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDI 152 + AWH G N SIGIE+ N G + A I + L K + Sbjct: 218 DSNAAWHCGDGH-GNYGITNHNSIGIEMCNSGGYIA----------DATINNALWLVKKL 266 Query: 153 IARYHIKPENVVAHADIAPQRKDDPGPL 180 A+Y+I +NVV H D RK+ P + Sbjct: 267 QAKYNIDNDNVVRHYD--ASRKNCPANM 292 >UniRef50_P81717 N-acetylmuramoyl-L-alanine amidase A n=1 Tax=Achromobacter lyticus RepID=CWHA_ACHLY Length = 177 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 64/180 (35%), Gaps = 42/180 (23%) Query: 29 YQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK--QVSSHYLVPAVPPRYNGKPR 86 + + A + +++H + S++ + QVS+HYL+ + Sbjct: 9 WNPASSSNYSTASNQTSAVIMHTMEGSYAGSISWFQNPSAQVSAHYLIRK------SDGQ 62 Query: 87 IWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALI 146 I Q+V E AWHA N +IGIE + R + A + A Sbjct: 63 ITQMVREYHQAWHA--------KNHNYYTIGIEHDGRAADAGN-------WSAAMVNASA 107 Query: 147 PLAKDIIAR----------------YHIKPE--NVVAHADIAPQ-RKDDPGPLFPWQQLA 187 L K I AR +H+ P+ V H ++ + DPG FPW Sbjct: 108 RLTKSICARRGVNCASAWKGPGYDTFHLVPDSVRVKGHGMLSGNENRYDPGKYFPWSNYY 167 >UniRef50_B9XDJ7 N-acetylmuramoyl-L-alanine amidase family 2 n=1 Tax=bacterium Ellin514 RepID=B9XDJ7_9BACT Length = 1809 Score = 106 bits (265), Expect = 7e-22, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 66/215 (30%), Gaps = 41/215 (19%) Query: 4 FFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQA---QAAYPRIKVLVIHYTADDFDSSL 60 + L+ + A CA G + + + + K +VIH + S++ Sbjct: 18 WLKLLVPMFIGASCANMVTASTDYGPAVWRQAYSGHWSTSGYGHKFVVIHDMEGYYASTI 77 Query: 61 ATLTDK--QVSSHYLVPAVPPRYNG--KPRIWQLVPEQELAWHAGISAWRGATRLNDTSI 116 + Q S HY V + Q+V E AWH + W N Sbjct: 78 SYFQRSSTQASVHYCVNGKQDSSTDYPAGEVTQMVREAYYAWH--VLCW------NHYCA 129 Query: 117 GIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHI--KPENVVAHAD------ 168 G E E A + A + L + + Y I ++V H Sbjct: 130 GTEHEGFASNP-------AWYTDAMYNSSGLLQRHLCDHYGIAKDRNHIVGHNAWQSSAW 182 Query: 169 ---------IAP--QRKDDPGPLFPWQQLAQQGIG 192 I P DPGP + W +L +G Sbjct: 183 RTYASANFGIDPNCNSHTDPGPYWNWTKLMNVVLG 217 >UniRef50_B1TGB7 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=Burkholderia ambifaria RepID=B1TGB7_9BURK Length = 1030 Score = 106 bits (265), Expect = 8e-22, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 77/261 (29%), Gaps = 45/261 (17%) Query: 8 VAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYT-ADDFDSSLATLTD- 65 A+AL L D R ++ I ++IH + T T+ Sbjct: 216 TASALALGARENSLVTRTAASPNFDEGRGSK----TIDRIIIHIADVPTIQHVVNTFTNA 271 Query: 66 -KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELE--- 121 +VSSHYLV + Q V E + AWH N SIGIE Sbjct: 272 ASKVSSHYLV-------GQAGEVVQFVSEADTAWHC--------KGSNQRSIGIEHIAVK 316 Query: 122 --NRGWQKSAGV----KYFAPFEPAQIQALIPLAKDIIARY--HIKPENVVAH--ADIAP 171 + + G AP Q + L + +Y I ++ H AD + Sbjct: 317 RGGADYPRRNGTVQHFDALAP-TQLQYETSAALVASLCDKYQLPINRTTIMGHREADTST 375 Query: 172 QRKDDPGPLFPWQQLAQQGIGA--WPDAQRVNFYLAGRAPHTPVDTASLLELLA------ 223 P + W + P A A R + + L+ Sbjct: 376 GHTACPDGNWDWDYFMRLVNSRTCQPQAAGQALGFAARGLGDDIPLDPGVGGLSIGTDAL 435 Query: 224 RYGYDVKPDMTPREQRRVIMA 244 G D+ T VI A Sbjct: 436 EIG-DIILSTTGNSGSGVIRA 455 >UniRef50_Q31KQ2 N-acetylmuramoyl-L-alanine amidase, family 2 n=2 Tax=Synechococcus elongatus RepID=Q31KQ2_SYNE7 Length = 317 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 29/173 (16%) Query: 35 RQAQAAYPRIKVLVIHYTADDFDSSLATLT------DKQVSSHYLVPAVPPRYNGKPRIW 88 R Q RI ++V+H T DS++ + Q S H L+ I Sbjct: 129 RNGQPVDNRISLIVLHETVASADSAINFFQTPHPRDEDQASYHALIR-------RNGTIV 181 Query: 89 QLVPEQELAWHAGISAWRGA---------TRLNDTSIGIELENRGWQKSAGVKYFAPFEP 139 VP ++ A+ AG S++RG +N+ S+ + LE+ + ++ + Sbjct: 182 YTVPPEKRAFGAGSSSFRGEAVRFNPKLPGSVNNFSLHVSLESPADGRDNRRRHSG-YTA 240 Query: 140 AQIQALIPLAKDIIARYHIKPENVVAHADIAPQR---KDDPGPLFPWQQLAQQ 189 Q +L LA+ + Y I + + HA A R + DP F W +LAQ+ Sbjct: 241 RQYDSLALLAQQWMTTYTIPGDRITTHA--AVDRSGSRMDP-RSFQWARLAQR 290 >UniRef50_Q7V7M8 N-acetylmuramoyl-L-alanine amidase (Family 2) n=2 Tax=Prochlorococcus marinus RepID=Q7V7M8_PROMM Length = 312 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 29/187 (15%) Query: 22 GIVEKEGY--QLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTD------KQVSSHYL 73 +++ Y + + P V+++H T D + S+L D QVS H L Sbjct: 121 VVIDSSNYGKRYRWDLYGRRVDPTPSVVILHETTDSYQSALYAFKDYHRKDEDQVSYHTL 180 Query: 74 VPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGA---------TRLNDTSIGIELENRG 124 + +I +V A+ AG SA+ G +N+ ++ + LE Sbjct: 181 ITL-------DGQIIDVVDPLNRAYGAGNSAFLGEWVVTNPRFKGSVNNFALHLSLETP- 232 Query: 125 WQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHA--DIAPQRKDDPGPLFP 182 W G + + Q +L + D + R++I PEN+ H D+A +R DP F Sbjct: 233 WDGRNGYLNHSGYSDKQYDSLALVLADWMDRFNIPPENITTHQHVDLAGER-SDP-RSFD 290 Query: 183 WQQLAQQ 189 W L ++ Sbjct: 291 WSNLQRR 297 >UniRef50_A3TR75 Putative amidase n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TR75_9MICO Length = 634 Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 68/183 (37%), Gaps = 27/183 (14%) Query: 25 EKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLT-----DKQVSSHYLVPAVPP 79 ++ + I LV+H T +D + ++ VS HY V + Sbjct: 251 PAVTQYVNYDLADREKDLSIDYLVVHNTECTYDVCTKLIKGEAEPNRFVSWHYTVRSN-- 308 Query: 80 RYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEP 139 + Q V + +A HAG W LN S+G+E E + + + Sbjct: 309 ----DGHVDQHVATRNVAAHAG--NW----YLNMHSVGVEHEGKAGEPG------TWYTE 352 Query: 140 AQIQALIPLAKDIIARYHI--KPENVVAHAD-IAPQRKDDPGPLFPWQQLAQQGIGAWPD 196 A ++ L + A+ I ++V H + ++ K DPGP + W+ +GA Sbjct: 353 ALYRSSAELVTYLAAQKGIELDRAHIVGHEEFMSSNYKWDPGPYWDWEHYM-ALLGAPIR 411 Query: 197 AQR 199 R Sbjct: 412 PDR 414 >UniRef50_D2AX66 Negative regulator of beta-lactamase expression-like protein n=12 Tax=Actinomycetales RepID=D2AX66_STRRD Length = 646 Score = 104 bits (260), Expect = 3e-21, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 62/164 (37%), Gaps = 29/164 (17%) Query: 36 QAQAAYPRIKVLVIHYTADDFDSSLATLTD--KQVSSHYLVPAVPPRYNGKPRIWQLVPE 93 + +I +VIH F S+ + + + S HY + I Q + Sbjct: 276 SNRPWNQKIDYIVIHDMEGYFGPSVDLVQNPARPASWHY------SLRSSDGHIAQHLKT 329 Query: 94 QELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDII 153 +++ W AG W +N SIG+E E + A + A + L + + Sbjct: 330 KDVGWQAG--NW----YVNAKSIGLEHEG------FLGEGAAWYTEAMYRTSAKLVRYLA 377 Query: 154 ARYHIKPE--NVVAHADIAP-------QRKDDPGPLFPWQQLAQ 188 R+ + + +++ H ++ +DPGP + W + + Sbjct: 378 MRHGVPLDRAHIIGHDNVPGTLPTTVRGMHEDPGPFWDWARYFE 421 >UniRef50_C4DKK4 Negative regulator of beta-lactamase expression n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DKK4_9ACTO Length = 637 Score = 103 bits (258), Expect = 5e-21, Method: Composition-based stats. Identities = 36/169 (21%), Positives = 66/169 (39%), Gaps = 28/169 (16%) Query: 38 QAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELA 97 + I LVIH T + ++L + D V + + Q V +++A Sbjct: 274 RPKDMDIDYLVIHDTETSYTNTLRLVQDP-----TYVSWQYTLRSFDGHVAQHVKSEDVA 328 Query: 98 WHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYH 157 W AG W +N S+G+E E + + F A ++ L K + ++ Sbjct: 329 WQAG--NW----SVNAHSMGLEHEGVAAEG-------SWFTEAMYRSSAKLVKYLSKKFD 375 Query: 158 IK--PENVVAHADI---APQR----KDDPGPLFPWQQLAQQGIGAWPDA 197 I ++++ H ++ AP + D GP + WQ +GA + Sbjct: 376 IPLNRDHIIGHDNVPGTAPAKIAGMHWDTGPFWDWQHYFDL-LGAPLEP 423 >UniRef50_D2AYL5 Negative regulator of beta-lactamase expression-like protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AYL5_STRRD Length = 666 Score = 103 bits (257), Expect = 6e-21, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 62/161 (38%), Gaps = 30/161 (18%) Query: 39 AAYPRIKVLVIHYTADDFDSSLATLTDKQ--VSSHYLVPAVPPRYNGKPRIWQLVPEQEL 96 RI +VIH +D ++ LT +S H+ +G I Q + ++ Sbjct: 299 DGPRRIDYIVIHDGESSYD-AITRLTRNPTYLSWHF------TLRSGDGHIAQHLRGSDI 351 Query: 97 AWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARY 156 WHAG W +N SIG+E E G+ G A + A ++ L + +Y Sbjct: 352 GWHAG--NW----YVNTRSIGLEHE--GYLAKGG----AWYTEAMYRSSAALVAHLARKY 399 Query: 157 HIK--PENVVAHADIAPQR-------KDDPGPLFPWQQLAQ 188 + +++ H ++ DPGP + W + Sbjct: 400 GVPLNRAHIIGHDNVPGTTPEGVRDMHQDPGPYWDWAHYFE 440 >UniRef50_Q0AY32 Negative regulator of beta-lactamase expression-like protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AY32_SYNWW Length = 222 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 45/207 (21%), Positives = 85/207 (41%), Gaps = 34/207 (16%) Query: 26 KEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK--QVSSHYLVPAVPPRYNG 83 K ++ A + +V H TA +L+ L + +VS+H+L+ + Sbjct: 8 KIEWKGTANFSAGRRGRKPIAIVNHITAGLLPGALSWLQNPASRVSTHFLI-------SR 60 Query: 84 KPRIWQLVPEQELAWHAGISA------WRGATRLNDTSIGIELENRGWQKSAGVKYFAPF 137 + +I+QLV E++ AW GI + G + N ++ IE E Sbjct: 61 QGQIFQLVKEEDTAWANGIVNQPNWVLYDG-SNPNFYTLSIEHEALAGDSL--------- 110 Query: 138 EPAQIQALIPLAKDIIARYHI--KPENVVAHADI-APQRKDDPGPLFPWQQL------AQ 188 Q QA + L + +++R++I E+++ H I + R + PG FPW++L + Sbjct: 111 SEEQYQASLCLHRLLVSRFNIAVDEEHIIGHYRIDSINRSNCPGSRFPWKRLFSDLKGEK 170 Query: 189 QGIGAWPDAQRVNFYLAGRAPHTPVDT 215 + G P+ + + D Sbjct: 171 EETGEMPEKWKTELMKEAKKLGLITDQ 197 >UniRef50_D1SBP4 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1SBP4_9ACTO Length = 677 Score = 100 bits (248), Expect = 8e-20, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 59/158 (37%), Gaps = 27/158 (17%) Query: 38 QAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELA 97 + +I+ +VIH T F S+ + + YL + I Q + +++ Sbjct: 293 RPKQQKIEYIVIHDTEGYFGPSVDLVKR----ADYL-GWHYTLRSVDGYIAQHIKTKDVG 347 Query: 98 WHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYH 157 WHAG W +N SIG+E E Q + + A + L + + + Sbjct: 348 WHAG--NW----YVNAKSIGLEHEGFAGQGT-------WYTEAMYRTSAKLVRHLALKLG 394 Query: 158 IKPE--NVVAHADIA-------PQRKDDPGPLFPWQQL 186 I + +++ H ++ DPGP + W Sbjct: 395 IPMDRQHIIGHDNVPGINAGAVGGMHWDPGPYWDWSHY 432 >UniRef50_C7Q860 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q860_CATAD Length = 589 Score = 99.6 bits (247), Expect = 9e-20, Method: Composition-based stats. Identities = 38/191 (19%), Positives = 70/191 (36%), Gaps = 33/191 (17%) Query: 6 WLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTD 65 + A ++ + Y+ R + A Y + IH +L T D Sbjct: 211 YPSAIDCVVPTSYDCNVVSGPCTYESSNRPTSYAVYD----VTIHDIEGTAQDALTTFQD 266 Query: 66 --KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENR 123 K VS HY++ + ++Q+V E+++A+HAG + N+ ++GIE Sbjct: 267 ISKGVSVHYVI-------DSDGTVYQVVREKDIAYHAGNFYY------NEHAVGIEHAGI 313 Query: 124 GWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPE--NVVAHADI-APQ-----RKD 175 + + + A L + +Y+I + ++ AH AP Sbjct: 314 D------ATGYQWYNATEYLASAKLVAYLANKYNIPLDHAHITAHGTTPAPTTASSPNHV 367 Query: 176 DPGPLFPWQQL 186 DPG + W Sbjct: 368 DPGKYWLWDYY 378 >UniRef50_C0A8M7 Negative regulator of beta-lactamase expression-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A8M7_9BACT Length = 141 Score = 99.6 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 47/137 (34%), Positives = 62/137 (45%), Gaps = 24/137 (17%) Query: 55 DFDSSLATL--TDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLN 112 + ++A + + QVS H L+ R +LV ++ +AWHAG S + G TR N Sbjct: 2 SWADTIAHMLRPESQVSYHVLIATDGVRA-------RLVADEHIAWHAGASNFLGRTRCN 54 Query: 113 DTSIGIELENRGWQKSAGVKYFAPFEPAQIQ-ALIPLAKDIIARYHIKPENVVAHADIAP 171 D +G+ AG P AQI AL LA AR P + H IAP Sbjct: 55 DFLLGV--------SFAGNTRLTPLTEAQIASALDWLAPRWFAR-GWTPAVMTDHRQIAP 105 Query: 172 QRKDDPGPLFP--WQQL 186 RKDD LFP W +L Sbjct: 106 GRKDD---LFPAEWMRL 119 >UniRef50_B2A1Q6 N-acetylmuramoyl-L-alanine amidase family 2 n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A1Q6_NATTJ Length = 235 Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 40/174 (22%), Positives = 64/174 (36%), Gaps = 37/174 (21%) Query: 31 LDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLT-------DKQVSSHYLVPAVPPRYNG 83 +D ++ I LVIH T + + A ++ S+HY V Sbjct: 8 IDYNYSSR-QNQTISYLVIHDTGNSRPGADAKAHYHYFNAGNRSASAHYFVD-------- 58 Query: 84 KPRIWQLVPEQELAWHAGISAWRGATRL-NDTSIGIELENRGWQKSAGVKYFAPFEPAQI 142 +I QLV + +WH G RG + N SIGIE+ A + Sbjct: 59 DTQILQLVEDHHASWHCGDG--RGRYGITNSNSIGIEICINSDGNYAKA----------V 106 Query: 143 QALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPD 196 + I L + +Y I +V H D++ RK PG +++ W + Sbjct: 107 EQTIKLTAYLAEKYTIPHNKIVRHYDVS--RKICPG------TMSRDNWALWYE 152 >UniRef50_Q2SEW1 Negative regulator of beta-lactamase expression n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SEW1_HAHCH Length = 199 Score = 98.5 bits (244), Expect = 2e-19, Method: Composition-based stats. Identities = 38/167 (22%), Positives = 58/167 (34%), Gaps = 29/167 (17%) Query: 33 TRRQAQAAYPRIKVLVIHYTAD---DFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQ 89 + I+ ++IH T ++L T S+HY+V N + R+ Q Sbjct: 28 ANFRIPPGRRDIRYIIIHITGGPALTERNALNTFRAGPASAHYIV-------NREGRVVQ 80 Query: 90 LVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLA 149 V E +A H + T N SIGIE N + + AQ A L Sbjct: 81 TVREAHIANH--VDNIHSQT--NRESIGIEHVNP---WDPNPRTYP--TDAQYMASARLV 131 Query: 150 KDIIARYHIKPEN--------VVAHADIAP--QRKDDPGPLFPWQQL 186 + RY I + + H + AP + P P + W Sbjct: 132 AWLCHRYGIPVRHETAPHTAGIRGHIEEAPHSGHRTCPNPAWNWDLY 178 >UniRef50_A9B3J4 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B3J4_HERA2 Length = 426 Score = 98.1 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 51/233 (21%), Positives = 83/233 (35%), Gaps = 47/233 (20%) Query: 30 QLDTRRQAQAAYP--------RIKVLVIHYTADDFDSSLATLTDKQV--SSHYLVPAVPP 79 Q DT + + + +++H TA SL +V S +YL+ Sbjct: 2 QFDTSYLNKTPNKTARNTTSFKPEFVILHETAGY--GSLEWNLRPEVRSSYNYLIA---- 55 Query: 80 RYNGKPRIWQLVPEQ-ELAWHAGISAW-RGATR--LNDTSIGIELENRGWQKSAGVKYFA 135 + + V E+ +AWHAG+ +W RG + +N +IG+E+E Sbjct: 56 ---RDGKTYHYVNEKSYIAWHAGVRSWARGYSGGEINVYAIGVEVEGPNDG--------T 104 Query: 136 PFEPAQIQALIPLAKDIIARY--HIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGA 193 P AQ +AL+ L + Y I + AH+ +AP KDDP +G Sbjct: 105 PITTAQTKALVELIRYFRDTYAIPINRDYFFAHSTVAPGYKDDP-----------RGYSV 153 Query: 194 WPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQ 246 + P T +L L Y + + AF+ Sbjct: 154 ---EYTLKLLDESSLPSTGPRPNTLGAQLRNEVYKLAKGEYRPDWMFHQYAFK 203 >UniRef50_C0G0C8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Natrialba magadii ATCC 43099 RepID=C0G0C8_NATMA Length = 321 Score = 97.7 bits (242), Expect = 4e-19, Method: Composition-based stats. Identities = 42/167 (25%), Positives = 58/167 (34%), Gaps = 40/167 (23%) Query: 44 IKVLVIHYTADDFDSSLATLT--DKQVSSHYLVPAVPPRYNGK-PRIWQLVPEQELAWHA 100 I +VIH TA + +L TLT D VSSHYLV + + QLV AWHA Sbjct: 81 IDWIVIHVTAGAYQGALNTLTSSDSGVSSHYLVKNYDWTDGPEAGHVDQLVHHDRAAWHA 140 Query: 101 GISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKP 160 + N SIGIE E W G+ A ++ L + I + I Sbjct: 141 -------RSIANHRSIGIEHE---WFDDNGI------SDACYESSAELVRCIADMHDIPL 184 Query: 161 E-------------NVVAHADIAPQR--------KDDPGPLFPWQQL 186 E ++ H + + P P + Sbjct: 185 EFYTSNTCIQNESGGIIGHTHVPDGDCSSFHHGGRTCPYPDWDMDHF 231 >UniRef50_Q3AXW0 N-acetylmuramoyl-L-alanine amidase, family 2 n=13 Tax=Chroococcales RepID=Q3AXW0_SYNS9 Length = 308 Score = 94.6 bits (234), Expect = 3e-18, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 69/191 (36%), Gaps = 31/191 (16%) Query: 18 AGEKGIVEKEGYQLDTRRQAQAAYPR----IKVLVIHYTADDFDSSLATLT------DKQ 67 + V + R A R +V+V+H T S++ T + Q Sbjct: 116 GSWRTFVPIDPTNFGKRFTEDAFGRRLDGSPRVIVLHETVYSVSSAVNTFQTPHPIDEDQ 175 Query: 68 VSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGA---------TRLNDTSIGI 118 VS H L+ + R+ LV A+ AG SA+ G +N+ ++ + Sbjct: 176 VSYHTLI-------SRDGRVLDLVDPLMRAYGAGYSAFLGEWAITNKRLKGSVNNFALHL 228 Query: 119 ELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVV--AHADIAPQRKDD 176 LE + + + Q AL + + +++ P +V H DI +R D Sbjct: 229 SLETPSNGANGRSGHSG-YSSEQYDALALVLAGWMDAFNLPPTSVTTHRHVDIGGER-AD 286 Query: 177 PGPLFPWQQLA 187 P F W L Sbjct: 287 P-RSFDWSALQ 296 >UniRef50_Q160K6 N-acetyl-anhydromuramyl-L-alanine amidase, putative n=2 Tax=Roseobacter RepID=Q160K6_ROSDO Length = 352 Score = 94.2 bits (233), Expect = 4e-18, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 69/183 (37%), Gaps = 52/183 (28%) Query: 47 LVIHYTADD-FDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAW 105 +V+HYTA ++ L + +S + LV + + Q A HAG S + Sbjct: 67 IVVHYTAGSSLSGAVNALKSRGLSYNVLV-------DLDGSLHQARAFNRRAGHAGRSNF 119 Query: 106 ------RGATRLNDTSIGIELENRGWQKS------------------------------- 128 + + LN ++I I L N G+ + Sbjct: 120 KATSGLKNQSSLNGSTIAISLVNLGFHEHFSGGHWWYARSKGKLRGPKVVDVEANKMSSI 179 Query: 129 ---AGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFP--- 182 V ++ P+ AQ+ + L + ++A+Y +V H D++ K DPGP P Sbjct: 180 YNPGLVMHWVPYTDAQVASCEALIEALVAKYP-SITEIVGHDDVSINAKLDPGPALPTQA 238 Query: 183 WQQ 185 W++ Sbjct: 239 WRE 241 >UniRef50_B9XDJ6 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=bacterium Ellin514 RepID=B9XDJ6_9BACT Length = 337 Score = 93.9 bits (232), Expect = 6e-18, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 62/224 (27%), Gaps = 45/224 (20%) Query: 45 KVLVIHYTADDFDSSLATLTDK--QVSSHYLVPAVPPRYNGK--PRIWQLVPEQELAWHA 100 K +V H + S+++ Q S HY V + Q+V E AWH Sbjct: 48 KFVVCHDMEGYYLSTISYFQQSGTQASIHYCVNGKQDTGTDAPAGELTQMVSEAYYAWH- 106 Query: 101 GISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKP 160 + W N G E E A + A L + + Y I Sbjct: 107 -VLCW------NTYCAGTEHEGFASNP-------AWYTDAMYNTSGLLQRHLCDHYGIPK 152 Query: 161 E--NVVAHA-----------------DIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVN 201 + ++V H D DPG + W +L P + Sbjct: 153 DRNHIVGHDEWQNAAWCTYASAHFGIDTTCNSHTDPGQYWDWNKLMSIVN---PTTTTIV 209 Query: 202 FYLAGRAPHTPVDTASLLELLARYG----YDVKPDMTPREQRRV 241 A T + A+ +YG Y ++ Sbjct: 210 VDNADAGFSTSANWATGTSATDKYGADYRYRSNASLSDAATFST 253 >UniRef50_B2U693 N-acetylmuramoyl-L-alanine amidase family protein n=10 Tax=Proteobacteria RepID=B2U693_ECOLX Length = 96 Score = 92.3 bits (228), Expect = 1e-17, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 34/67 (50%) Query: 207 RAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIA 266 D ++ L YGY + T + ++ AFQ+HFR Y+G DAET AI Sbjct: 26 FESQGIPDKVDIVSRLKTYGYSISGVKTDDGYKALVRAFQLHFRQKNYDGIMDAETAAIL 85 Query: 267 EALLEKY 273 ALLEKY Sbjct: 86 YALLEKY 92 >UniRef50_C7N6M2 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N6M2_SLAHD Length = 268 Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 76/218 (34%), Gaps = 47/218 (21%) Query: 28 GYQLDTRRQAQAAYPR----IKVLVIHYTADDFDSSLATLTD--------KQVSSHYLVP 75 Y+++ + PR +K +V+HYT ++ A L + +Q S+HY + Sbjct: 2 SYEINKHHGSYNIQPRSASAVKYIVVHYTGSGTSAAPAALNNCQYFSGGDRQASAHYFID 61 Query: 76 AVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRL-NDTSIGIELENRGWQKSAGVKYF 134 P + L WH G RG + N SIGIE+ G Sbjct: 62 DETIYEYAD-------PSRHLTWHVGDG--RGKYGITNTNSIGIEVCQDGD--------- 103 Query: 135 APFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFP--------WQQL 186 PF A+ + L L + ++ Y + + VV H D RK P P W+ L Sbjct: 104 RPFTEAETKRLQWLVRRLMDEYGVPADRVVRHYD--ASRKLCPYYYTPGGSGGDAAWKAL 161 Query: 187 AQQGI------GAWPDAQRVNFYLAGRAPHTPVDTASL 218 ++ W + + +Y + Sbjct: 162 HRRITADGASKAGWVKSAKGWWYRRADGTWPASKWERI 199 >UniRef50_A4TAY9 Peptidoglycan-binding domain 1 protein n=5 Tax=root RepID=A4TAY9_MYCGI Length = 288 Score = 90.4 bits (223), Expect = 6e-17, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 85/255 (33%), Gaps = 30/255 (11%) Query: 34 RRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPE 93 R + + I+ +++H+T D S+ + + + P + V Sbjct: 32 RNRGHGDFKDIRGVMVHHTGSDTASAESIARGRPDLA---GPLSQLHIARDGTVT--VVA 86 Query: 94 QELAWHAGISA--WRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKD 151 +AWHAG+ W A N +IGIE N G +A + + AQ ALI Sbjct: 87 AGVAWHAGVGMYPWLPANMGNWHTIGIECANSGTSPTAPHRR--NWPDAQYAALIGCCAA 144 Query: 152 IIARYHIKPENVVAHADIAPQR---KDDPGPLFPWQQLAQQG------IGAWPDAQR--- 199 I R + + H + A R K DPG + +L + +G P + Sbjct: 145 ICRRLGVPATRTIGHKEYA-GRAQGKWDPGGI-DMDRLRRDVAARIGSVGGGPRPRPTVP 202 Query: 200 ------VNFYLAGRAPHTPVDTASLLELLARYGYDVKPDM-TPREQRRVIMAFQMHFRPT 252 V Y R P L A Y D++ D + + FQ Sbjct: 203 VGEYAEVLLYRGSRGPQVAELQRRLKHAYAAYAGDLRIDGVYGPDTEAAVREFQRRTAGL 262 Query: 253 LYNGEADAETQAIAE 267 +G T A Sbjct: 263 KVDGVVGPATAAALR 277 >UniRef50_UPI0001B554B9 secreted amidase n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B554B9 Length = 639 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 44/213 (20%), Positives = 76/213 (35%), Gaps = 35/213 (16%) Query: 16 GCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQ-VS-SHYL 73 CA + ++ G D R A I +V+H F S+ +L+ VS +HYL Sbjct: 245 SCAFDPVLIAANGQVSD--RPANGIA--IDRIVLHTAEGSFASAKQSLSAPGAVSGAHYL 300 Query: 74 VPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKY 133 + QL+ ++LA+ G + N S+ IE Q + Sbjct: 301 -------MDTDGTTTQLMANKDLAFAVGNYHY------NLHSVSIE------QAGFTARG 341 Query: 134 FAPFEPAQIQALIPLAKDIIARYHIKPE--NVVAHADIAP-------QRKDDPGPLFPWQ 184 + A Q L K + RY + + +V+ H ++ + D G + W Sbjct: 342 ADWYTDAVYQRTAELVKYLAERYDVPLDRQHVLGHDNVPGSLDSNLAAQHWDKGTAWDWN 401 Query: 185 QLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTAS 217 + + +GA DA AG + + Sbjct: 402 RFMRL-LGAPTDAGTRGVGKAGSVVTIAPEFGT 433 >UniRef50_B6BGC2 B-N-acetylglucosaminidase, glycoside hydrolase family 3 protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGC2_9PROT Length = 555 Score = 88.1 bits (217), Expect = 3e-16, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 66/187 (35%), Gaps = 54/187 (28%) Query: 35 RQAQAAYPRIKVLVIHYTA-DDFDSSLATLTDK---------------QVSSHYLVPAVP 78 Q + K +V+H+TA DF+ L VSSH+LV Sbjct: 384 FDVQNINIKPKAIVLHWTAVMDFEDCFKRLKGNTLYSDRGDIADAGALNVSSHFLVA--- 440 Query: 79 PRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFE 138 I+QL+P+ +A H LN +SIGIE + Sbjct: 441 ----RDGTIYQLMPDNWMARH--------VIGLNYSSIGIENVGGEDNVKDDL------T 482 Query: 139 PAQIQALIPLAKDIIARYHIKPENVVAHADI-------------APQR--KDDPGPLFPW 183 P Q+ A I L K + A+Y E ++ H + A R K DPG F Sbjct: 483 PEQVDANIKLVKYLKAKYP-NIEYLIGHHEYTQMEKTPLWLEKDAEYRTKKADPGEKF-M 540 Query: 184 QQLAQQG 190 ++ + Sbjct: 541 NRVRKHV 547 >UniRef50_C7UBT6 Sporulation domain-containing protein n=3 Tax=Bacilli RepID=C7UBT6_ENTFA Length = 306 Score = 88.1 bits (217), Expect = 3e-16, Method: Composition-based stats. Identities = 37/142 (26%), Positives = 55/142 (38%), Gaps = 20/142 (14%) Query: 18 AGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTAD-DFDSSLATLTDKQVSSHYLVPA 76 G + K G+Q + + ++ +VIH+ A ++D + ++ S+HY + Sbjct: 1 MGISSLATKYGFQSFPHYSSGRSGAKVNKIVIHHMAGTNYDIVPSIWQTREASAHYGIGK 60 Query: 77 VPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAP 136 I V E AWHAG W N +SIGIE N S V Sbjct: 61 N-------GEIRAYVDENNTAWHAG--NW----NANISSIGIENCNSNGSPSWSVN---- 103 Query: 137 FEPAQIQALIPLAKDIIARYHI 158 A I A L DI R+ + Sbjct: 104 --QATIDACAKLVADIAKRHGL 123 >UniRef50_C1MT36 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MT36_9CHLO Length = 267 Score = 87.3 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 69/200 (34%), Gaps = 69/200 (34%) Query: 44 IKVLVIHYTA-DDFDSSLATLTDKQ-VSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAG 101 I +VIHY A L +++ +S H+L+ + I+Q + +E AWHA Sbjct: 72 IDKVVIHYDACGSSAKCFDVLHNQRGLSCHFLI-------DVDGTIYQTLDARERAWHA- 123 Query: 102 ISAWRGATRLNDTSIGIELENRGWQK---------------------------SAGVKYF 134 T ND+S+G+EL +RG + Sbjct: 124 -------TTANDSSVGVELAHRGAVEMPKASAEDGTSTDATNSEHPHRVVGFVHGRELSQ 176 Query: 135 APFEPAQIQALIPLAKDIIAR-------YHIKPE-----------------NVVAHADIA 170 APF AQ +L L ++ Y + V+ H + Sbjct: 177 APFADAQYASLAALVAGVMRACPRVRCEYPRGTDGEAATTKLEDDALRAFRGVLGHFHVQ 236 Query: 171 PQRKDDPGPLFPWQQLAQQG 190 K DPGP F W+ +A + Sbjct: 237 -TNKIDPGPAFDWEGVAARV 255 >UniRef50_B9XPB1 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=bacterium Ellin514 RepID=B9XPB1_9BACT Length = 586 Score = 86.9 bits (214), Expect = 6e-16, Method: Composition-based stats. Identities = 36/170 (21%), Positives = 54/170 (31%), Gaps = 41/170 (24%) Query: 45 KVLVIHYTADDFDSSLATLTDK----QVSSHYLVP--AVPPRYNGKPRIWQLVPEQELAW 98 + LVIH + S+++ + +VS +Y V + I Q+V E AW Sbjct: 79 QFLVIHDMEGYYLSTISYIQGGGGPEKVSINYCVNGIKDNSSDSPAGEITQMVREANYAW 138 Query: 99 HAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHI 158 H G W N G E E A + A QA L + + + Y I Sbjct: 139 HVG--CW------NTWMAGTEHEGFANNP-------AWYSEAMYQASAGLQRHMASAYGI 183 Query: 159 K--PENVVAHA------------------DIAPQRKDDPGPLFPWQQLAQ 188 +++AH D DPG + W Sbjct: 184 PIDRNHIIAHGEWQNASWKTWMAANYPSIDTTCNSHTDPGIYWDWTHFMD 233 >UniRef50_B8HV25 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HV25_CYAP4 Length = 274 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 67/186 (36%), Gaps = 35/186 (18%) Query: 28 GYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTD------KQVSSHYLVPAVPPRY 81 G +L R+ ++V+H T +++A Q S H L+ Sbjct: 100 GERLTQDAFGHPISSRVTLVVLHETVISGRAAIAAFQTNRPDDLAQASYHDLIL------ 153 Query: 82 NGKPRIWQLVPEQELAWHAGISAWRGA-------------TRLNDTSIGIELENRGWQKS 128 + LVP ++ A+ AG S + GA + +N+ S I LE+ + Sbjct: 154 -RNGTVVHLVPLEKRAFGAGNSVFYGANGPETVQTNPKLPSSVNNFSYHISLESPADGNN 212 Query: 129 AGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHA--DIAPQRKDDPGPLFPWQQL 186 + + A+ Q+L L K I + H D RK DP F + +L Sbjct: 213 ENATHSG-YTAAEYQSLAWLIKAA----GIPSNRITTHYAVDRTGTRK-DP-RSFDYTKL 265 Query: 187 AQQGIG 192 + + Sbjct: 266 FELLVA 271 >UniRef50_C0QM08 Putative N-acetylmuramoyl-L-alanine amidase AmpD n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QM08_DESAH Length = 439 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 79/202 (39%), Gaps = 40/202 (19%) Query: 2 RRFFWLVAAALLLAGCAGEKGIVEKEGYQ------LDTRRQAQAAYPRI-----KVLVIH 50 R L+ L+ G G+ + Y+ +D + + + + +++H Sbjct: 11 RWMIPLICCVFLITGMPGKSFSYSQSDYRKFKSDIIDYQGHLNPKFKKKSRKKTRYIIVH 70 Query: 51 YTADDFDSSLATLTD----------KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHA 100 + ++L +++ ++Y++ +Q++ +Q + HA Sbjct: 71 TSELGLSATLRVVSEGKQFKNGRSTPGGHANYVIA-------RNGVTYQIMDKQFRSDHA 123 Query: 101 GISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKP 160 G+S W G ++ S+GIEL ++AP AQ +++ L + Y + Sbjct: 124 GLSMWNGQNDISSVSLGIELVG---------HHYAPLTSAQYRSVAMLIDMLQKAYGLDD 174 Query: 161 ENVVAHADIAPQRKDDPGPLFP 182 + V+ H+ +A R P P F Sbjct: 175 KAVLTHSQVAYGR---PNPWFN 193 >UniRef50_C5RQQ9 N-acetylmuramoyl-L-alanine amidase family 2 n=3 Tax=Clostridium cellulovorans 743B RepID=C5RQQ9_CLOCL Length = 304 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 41/156 (26%), Positives = 63/156 (40%), Gaps = 32/156 (20%) Query: 39 AAYPRIKVLVIHYTADDFDSSLATL-----TDKQVSSHYLVPAVPPRYNGKPRIWQLVPE 93 + IK +V H+T +D D++ D++ S+HY V I Q+V E Sbjct: 14 SEGNNIKFIVCHFTGNDNDTAKNNADYFGSCDREASAHYFVDN--------NEIRQVVEE 65 Query: 94 QELAWHAGISAWRGATRL-NDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDI 152 +WH G GA + N SI IE+ S + L + + Sbjct: 66 YNASWHCGDGN--GAYGITNYNSISIEMCGANGDISETTA----------KNARNLIRLL 113 Query: 153 IARYHIKPENVVAHADIAPQRKDDPGPLF---PWQQ 185 + +Y ++ ENVV H D RK+ P P F W + Sbjct: 114 MKKYGVQIENVVRHYD--ASRKNCPSP-FSSNNWAR 146 >UniRef50_Q05S34 N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Synechococcus sp. RS9916 RepID=Q05S34_9SYNE Length = 292 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 63/159 (39%), Gaps = 25/159 (15%) Query: 44 IKVLVIHYTADDFDSSLATLT------DKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELA 97 +++V+H T +++ + QVS H L+ ++VP+Q A Sbjct: 120 PELIVLHETVISEPATVNLFQTPHPRDEDQVSYHMLIAT-------DGARLRIVPDQNRA 172 Query: 98 WHAGISAWRGAT---------RLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPL 148 + +G+SA+ AT +N+ ++ + L + + + +Q ++L Sbjct: 173 YGSGMSAFGDATQRRQPGRVGSINNVALHVSLVTPADGRGNTDAHSG-YTNSQYRSLAAQ 231 Query: 149 AKDIIARYHIKPENVVAHADIAPQR-KDDPGPLFPWQQL 186 A+Y I V HA + R + DP F W + Sbjct: 232 VLLWQAKYGIPLTRVTTHAAVDRSRTRYDP-RSFRWDRF 269 >UniRef50_A5Z412 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z412_9FIRM Length = 343 Score = 84.6 bits (208), Expect = 3e-15, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 61/163 (37%), Gaps = 31/163 (19%) Query: 44 IKVLVIHYTADDFDSSLATLT-----DKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAW 98 + +V+HYT + D++ A + S+H+ V I+Q V ++ AW Sbjct: 38 VAYVVMHYTGNSKDTAKANANYFGGAGRNASAHFFVD--------DAEIYQSVELRDTAW 89 Query: 99 HAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHI 158 H G +++ + N SIGIE+ +AG + + L + I Sbjct: 90 HCGAKSYKHGSCRNANSIGIEMC-----CTAGNYRISDRTK---ENAAYLCAFLCKMLGI 141 Query: 159 KP----ENVVAHADIAPQRKDDPGPLF----PWQQLAQQGIGA 193 V+ H D+ K+ P + WQ+ + G Sbjct: 142 GAGGVDSYVLRHYDVTG--KNCPAQMVSNPTEWQEFKNKVKGI 182 >UniRef50_B1ABI9 Putative uncharacterized protein n=1 Tax=Lactococcus phage asccphi28 RepID=B1ABI9_9CAUD Length = 330 Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 64/201 (31%), Gaps = 22/201 (10%) Query: 44 IKVLVIHYTADDFDSSL-ATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGI 102 I ++V+H+ + + +++ S+HY + +I + E AWH G Sbjct: 28 IDMIVLHHNGGTGSNVVPNCWIEREASAHYQI--------ENGQIINCLDEDITAWHCGA 79 Query: 103 SAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIK--P 160 N +IGIE +N S G + Q + L DI RY I Sbjct: 80 ----YGVDNNSHTIGIEHQN-----STGAPDWLVSNENQ-EKSAQLVADIAKRYGIPLDR 129 Query: 161 ENVVAHADIAPQRKDDPGPL-FPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLL 219 ++V H ++ D G L W + I + ++ Sbjct: 130 NHIVRHREMPNCNTDCSGGLDIDWVVTRAKQIAGQGGIPAPTPTPTPSNSNPVNPVVTVS 189 Query: 220 ELLARYGYDVKPDMTPREQRR 240 L + G +T Sbjct: 190 YGLRQIGAGWLGTITDFNNSN 210 >UniRef50_A0M513 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Gramella forsetii KT0803 RepID=A0M513_GRAFK Length = 223 Score = 83.8 bits (206), Expect = 6e-15, Method: Composition-based stats. Identities = 51/225 (22%), Positives = 82/225 (36%), Gaps = 70/225 (31%) Query: 2 RRFFWLVA--AALLLAGCAGEKGIVEKEGYQLD----------TRRQAQAAYPRI--KVL 47 R+FF LV L+L C + I + ++ D R + P I K++ Sbjct: 4 RKFFGLVGSFILLILFACESSRIIEKPIDFEKDRIELTLEYLKNRYGLEQNSPEIDPKMI 63 Query: 48 VIHYTA-DDFDSSLATLTDKQ---------------VSSHYLVPAVPPRYNGKPRIWQLV 91 V+H+T + S + + VSSH+LV + I++L+ Sbjct: 64 VLHWTEIPTLEDSFRAFKNSKLPQSREAISGASQLNVSSHFLV-------DKNGAIYRLM 116 Query: 92 PEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKD 151 PE +A H LN T+IG+E P AQ+ + I L Sbjct: 117 PETVMARH--------VIGLNHTAIGVENVG--------GTKDTPLTAAQVASNIWLVNY 160 Query: 152 IIARYHIKPENVVAHADI-------------APQR--KDDPGPLF 181 + +Y+I + V+ H + + R K DPG F Sbjct: 161 LSDKYNI--QYVIGHYEYTNFEGHDLWLEKDSGYRTMKVDPGEEF 203 >UniRef50_A7NJ74 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=5 Tax=Chloroflexaceae RepID=A7NJ74_ROSCS Length = 644 Score = 83.5 bits (205), Expect = 8e-15, Method: Composition-based stats. Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 29/154 (18%) Query: 40 AYPRIKVLVIHYTADDFDSSLATLTDKQVSS---HYLVPAVPPRYNGKPRIWQLVPEQEL 96 + +I+++V+H A SL T+ S HY V A I+QL+ ++ Sbjct: 510 SGSKIRLIVLHGDAGPALQSLETMAMPG-SPRMPHYYVAA-------HGAIYQLIDDEFA 561 Query: 97 AWHAGISAWRG-ATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIAR 155 A+H+G++ W G +N +SIG+ LE + A +AL L + A+ Sbjct: 562 AFHSGMAYWDGARRNINRSSIGVMLERPHTG----------YTDASQRALSWLIAHLRAK 611 Query: 156 YHIKPENVVAHADIAPQRKDD----PGPLFPWQQ 185 Y+I VV +D++P D PG W + Sbjct: 612 YNIPASGVVRWSDLSPDAAGDLADLPG---NWYR 642 Score = 41.1 bits (95), Expect = 0.038, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 72/232 (31%), Gaps = 46/232 (19%) Query: 31 LDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQ-----------VSS-HYLVPAVP 78 LD + Q +V+H+T L Q S+ H V Sbjct: 35 LDYVARYQFGQLTPSKVVLHHTWRPTVQQWRGLASMQGMQRYYANKGWASAPHIYVAPDG 94 Query: 79 PRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFE 138 IW P +++ HAG G+ + SIG+E+ ++ + Sbjct: 95 --------IWLFTPMKDIGIHAGPGN--GSLKAGWYSIGVEMVGDYDRERPSGAVW---- 140 Query: 139 PAQIQALIPLAKDIIARYHIKPENVVA-HADIAPQRKDDPGPLFPWQQLAQQGIG---AW 194 + + + R +I P ++A H D + +K PG W + +G AW Sbjct: 141 ----EGTKAVLGGLSRRLNIPPATLLAFHRDYS--KKSCPG----WAVTKEWVLGEVNAW 190 Query: 195 PDAQR-VNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAF 245 + G P + L E L Y + + AF Sbjct: 191 LNNAAPPPPPPPGPIGSIPPEIEELAEALLEQSYARRAEGYNSS-----WAF 237 >UniRef50_D0LV42 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LV42_HALO1 Length = 655 Score = 83.1 bits (204), Expect = 8e-15, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 81/256 (31%), Gaps = 61/256 (23%) Query: 30 QLDTRRQAQAAYPRIK-VLVIHYTADDFDSSLATLTD-KQVSSHYLVPAVPPRYNGKPRI 87 + +A I+ +V H L + + +S H+L + I Sbjct: 67 RYGESPPLEAVQNSIRQFIVHHDGCPSAKVCFNVLHNERGLSCHFL-------MDNDGTI 119 Query: 88 WQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAP----------- 136 +Q + +A+HA N SIGIE+ NRG K Y Sbjct: 120 YQTMDLSLMAYHA--------AGFNARSIGIEICNRGDAKRDPNYYSKKGQKREATTVRI 171 Query: 137 ---------FEPAQIQALIPLAKDIIARYHIKP----------------------ENVVA 165 F P QI+A+ L++ I P ++ Sbjct: 172 HGHVYKCFRFTPQQIEAMQALSQGISRALPNLPLEYPQDQPGQQAWGEIPNAAQFAGILG 231 Query: 166 HADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARY 225 H +RK DPGP F +++L ++ G+ V + + LE + R Sbjct: 232 HYHTT-RRKWDPGP-FDFKELCEKSRGSLCFPIFVKKQERSSDRPVVPEDSESLEEITRA 289 Query: 226 GYDVKPDMTPREQRRV 241 YD+ + V Sbjct: 290 MYDLNEKQSEGGYFPV 305 >UniRef50_Q5WIB6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WIB6_BACSK Length = 301 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 50/232 (21%), Positives = 80/232 (34%), Gaps = 51/232 (21%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLATL----------TDKQVSSHYLVPAVPPRYN 82 + R P + +H T + + A + ++VS HY V Sbjct: 13 SNRPGDRLNPT--HITVHETGNTSKGADAAMHARYIKGADARARKVSWHYTVD------- 63 Query: 83 GKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIEL-ENRGWQKSAGVKYFAPFEPAQ 141 +I Q VP+ E AWHAG N SIG+E+ N Sbjct: 64 -DKQIIQHVPDNERAWHAGSG--------NAKSIGVEICVNSDGNFEKAKSN-------- 106 Query: 142 IQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLF-PWQQLAQQGIGAWPDAQRV 200 L ++++++++I NVV H K+ P L W Q DA +V Sbjct: 107 ---AAWLLRNLMSKHNISLSNVVTHKYWTG--KNCPARLLKEWNAFKQLISNE--DAPQV 159 Query: 201 NFYLAGRAPHTPVD----TASLLELLARYGYDVKPDMT--PREQRRVIMAFQ 246 + P S+ + + YGY + D P +R +I +Q Sbjct: 160 GGIIVEDKPKAKPSGDAYIRSIQQWVVNYGYKIAVDGLKGPETKRGLIRVYQ 211 >UniRef50_B8HSE7 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=Cyanobacteria RepID=B8HSE7_CYAP4 Length = 305 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 60/158 (37%), Gaps = 32/158 (20%) Query: 46 VLVIHYTADDFDSSLATLT------DKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWH 99 ++V+H T D +++T D QVS H ++ + + LVP + A+ Sbjct: 135 LVVLHETVGDAHGAISTFQTPHYDDDNQVSYHAVI-------SRNGTVIYLVPANKRAYG 187 Query: 100 AGISAWRG-------------ATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALI 146 AG S + G A+ +N+ + I LE + + Q Q+L Sbjct: 188 AGNSEFIGINGVEAVQTNPSLASSVNNFAYHISLETPVDGLLDDHPEHSGYTQKQYQSLA 247 Query: 147 PLAKDIIARYHIKPENVVAHADIA--PQRKDDPGPLFP 182 L IAR + + HA I R+D FP Sbjct: 248 WL----IARTGVATSRITTHAAIDREGARQDPRSFSFP 281 >UniRef50_D0LH65 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LH65_HALO1 Length = 233 Score = 81.9 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 32/160 (20%) Query: 47 LVIHYTADDFDSSL---------ATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELA 97 ++ HYTA D ++ T ++ S H + + + IWQ+V A Sbjct: 88 IMAHYTATDPGTARAMAERRVRERTSQNRPASWHITI-------DHEGTIWQMVAASACA 140 Query: 98 WHAGISAWRGAT----RLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDII 153 WH G + +N +GIELE G + F AQI+A + + ++ Sbjct: 141 WHCARGKVDGPSGKKLSINQAVVGIELEGHGEE----------FTAAQIEAACRVWRALV 190 Query: 154 ARYHIKPE-NVVAHADIAPQRKDDPGPLFPWQQLAQQGIG 192 Y I ++ H+ P R+ DPGP++ +Q AQ+ + Sbjct: 191 RTYAIPDHLAMLEHSRYDPGRRVDPGPVW-MKQHAQRVLA 229 >UniRef50_B9XKL0 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=bacterium Ellin514 RepID=B9XKL0_9BACT Length = 594 Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 56/180 (31%), Gaps = 51/180 (28%) Query: 45 KVLVIHYTADDFDSSLATLTDKQ----VSSHYLVPAVPPRYNG------------KPRIW 88 + VIH + ++++ + VS +Y V + + I Sbjct: 59 QFCVIHDMEGYYLTTISYIQGGGGPQSVSINYCVNGLKNGSDSSGHVENNPSDSPAGEIT 118 Query: 89 QLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPL 148 Q+V EQ A+H G W N G E E V A + A +A L Sbjct: 119 QMVREQYYAYHVG--CW------NLWMFGTEHEG-------FVNNPAWYTEAMYRASADL 163 Query: 149 AKDIIARYHIKPE--NVVAHA------------------DIAPQRKDDPGPLFPWQQLAQ 188 + + Y I + +++AH D DPG + W Q Sbjct: 164 QRHLCDNYGIPKDRNHIIAHGEWQNASWKTYMATNYASIDTTCNTHTDPGVYWNWSHFMQ 223 >UniRef50_A9B2D0 Putative uncharacterized protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B2D0_HERA2 Length = 186 Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 39/169 (23%), Positives = 66/169 (39%), Gaps = 34/169 (20%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLATLT---DKQVSSHYLVPAVPPRYNGKPRIWQ 89 T A + +++H+T +SL LT + +VS+H L+ + Sbjct: 27 THFTVGRAGYQPLQILLHHTGGT--NSLLWLTRTSNPRVSAHRLISKSGMN-------HK 77 Query: 90 LVPEQELAWHAGISAWRGA-----------TRLNDTSIGIELENRGWQKSAGVKYFAPFE 138 LV +++ A+ AG LN+ ++ IE+ENRG P+ Sbjct: 78 LVKDEDTAYCAGFGTIGPVDPDGSDPVGVPRNLNECTLNIEIENRGNGVD-------PYP 130 Query: 139 PAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLA 187 Q+ + ++ +Y P V+ H + RKDDP F W L Sbjct: 131 LPQMTMVAWQIREWWGKYGFLP--VLGHGHVD-ARKDDP-AGFNWALLH 175 >UniRef50_A5IAD5 N-acetylmuramoyl-L-alanine amidase; amidase 2 n=7 Tax=Bacteria RepID=A5IAD5_LEGPC Length = 232 Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 47/224 (20%), Positives = 78/224 (34%), Gaps = 70/224 (31%) Query: 4 FFWLVAAALLLAGCAGEKGIVEKEGYQLDTRR--------------QAQAAYPRIKVLVI 49 F ++A+ C + I++K Q D +R +++ K++V+ Sbjct: 22 LFAFISASGHAFSCYDPQTIIQKP-IQFDKKRIALTREYQLTHYGIDSESIEIEPKMIVL 80 Query: 50 HYTA-DDFDSSLATLT----------------DKQVSSHYLVPAVPPRYNGKPRIWQLVP 92 H+T D++ D VSSH+LV + I+QL+P Sbjct: 81 HWTCIPSLDTTFRIFDPPALPTSSPRRNELPGDLNVSSHFLV-------DRDGTIYQLMP 133 Query: 93 EQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDI 152 E +A H LN +IGIE GV Q++A L + Sbjct: 134 ETWMARH--------VIGLNHYAIGIENIG-------GVDSKDDLTDEQVKANAFLVCYL 178 Query: 153 IARYHIKPENVVAHADI------------APQ---RKDDPGPLF 181 +Y + + ++ H + P K DPGP F Sbjct: 179 KNKYP-QIKYLIGHNEYLQYKGTALWLEKDPNYQTDKTDPGPTF 221 >UniRef50_Q8DLW7 Tlr0359 protein n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DLW7_THEEB Length = 287 Score = 81.2 bits (199), Expect = 3e-14, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 67/179 (37%), Gaps = 36/179 (20%) Query: 29 YQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLT------DKQVSSHYLVPAVPPRYN 82 Y+ D R Q P ++V+H T D S+L ++Q S H L+ Sbjct: 113 YRTDLRGQLLDHEP---LIVLHETVDSAASALNFFQTPHLRDEEQASYHELITLN----- 164 Query: 83 GKPRIWQLVPEQELAWHAGISAWRGAT---------RLNDTSIGIELENRGWQKSAGVKY 133 + LVP + A+ AG SA+ +N+ ++ LE + G + Sbjct: 165 --GWLLHLVPWSKRAYGAGNSAFGKEAAQTNPRLAPSVNNFALHFSLETPPQGRHNGPSH 222 Query: 134 FAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQR---KDDPGPLFPWQQLAQQ 189 + AQ + L L A+ I + V HA A R + DP F W + + Sbjct: 223 TG-YTDAQYRTLAWLV----AQTGIDRQRVTTHA--AVDRSGERMDP-RSFDWVKFNRY 273 >UniRef50_A1UKT0 Peptidoglycan-binding domain 1 protein n=3 Tax=Mycobacterium RepID=A1UKT0_MYCSK Length = 232 Score = 81.2 bits (199), Expect = 3e-14, Method: Composition-based stats. Identities = 45/233 (19%), Positives = 74/233 (31%), Gaps = 31/233 (13%) Query: 35 RQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQ 94 ++ + I+ +++H+T D ++ + + + P + V Sbjct: 9 QRGHGDFDDIRGVMVHHTGSDTATAASIADGRPDLA---GPLSQLHIARDGTVT--VVAA 63 Query: 95 ELAWHAGISA--WRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDI 152 +AWHAG W A N +IGIE N G +A + + AQ AL+ I Sbjct: 64 GVAWHAGAGRYRWLPANTGNRHTIGIECANTGTGPTA--PHRTNWPDAQYLALVRCCAAI 121 Query: 153 IARYHIKPENVVAHADIAPQR--KDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPH 210 + R + H + A K DPG D + + R Sbjct: 122 MRRLGFGAARTIGHREYAGGVQGKWDPGA---------------IDLDTLRADIQARIGF 166 Query: 211 TPVDTASLLELLA----RY-GYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEA 258 A L RY G+ + E + FQ L +G Sbjct: 167 ADAHVAEAQRRLKYAYRRYAGHLEIDGVYGPETEAAVREFQRRTPGLLADGIV 219 >UniRef50_C7PLI7 Peptidase C14 caspase catalytic subunit p20 n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PLI7_CHIPD Length = 1316 Score = 80.8 bits (198), Expect = 5e-14, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 77/235 (32%), Gaps = 69/235 (29%) Query: 45 KVLVIHYTADDFDSSLATLT--DKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGI 102 + +V+H+TA + S + +LT D+ VS +++ I+QL P + H G Sbjct: 56 ERIVLHFTAGNLRSDMQSLTTQDRHVSVPFVIA-------RDGTIYQLFPSANWSGHIGP 108 Query: 103 S-AWRGATRLND-TSIGIELENRGW----------------------------------- 125 +G D SIGIEL N + Sbjct: 109 GLGNQGTQNAQDKVSIGIELSNYAYLVPHDGVLETIYSRQPVNGKPGPVDEYCALSNSAA 168 Query: 126 -----QKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKP------------------EN 162 Q Y+A + P QI++ I L + + A+Y+I + Sbjct: 169 YIKINQPFRDQVYYAAYTPEQIESTIILLRYLTAKYNIPRQFLPADKRYTTTNDVLTFKG 228 Query: 163 VVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTAS 217 +V+H + K D GP F W L A L+ A S Sbjct: 229 IVSHINYRASGKWDIGPAFDWNTLISGVTAAEFTPATTARSLSFAARELSPAVTS 283 >UniRef50_B4WRE3 N-acetylmuramoyl-L-alanine amidase domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WRE3_9SYNE Length = 303 Score = 80.4 bits (197), Expect = 6e-14, Method: Composition-based stats. Identities = 36/164 (21%), Positives = 62/164 (37%), Gaps = 36/164 (21%) Query: 46 VLVIHYTADDFDSSLATLT------DKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWH 99 ++V+H T S+L + QVS H L+ I+ +VP ++ A+ Sbjct: 140 IVVLHETVGSASSALNLFARHHPRDEDQVSYHSLISL-------DGTIYYVVPPEQRAFG 192 Query: 100 AGISAWRGA-------------TRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALI 146 AG S++R + +N+ + I LE ++ + + AQ Q+L Sbjct: 193 AGNSSFRTTAGEETVTTNPGFPSSVNNFAYHISLETPPDGQNNSYSKHSGYTEAQYQSLA 252 Query: 147 PLAKDIIARYHIKPENVVAHADIAPQR---KDDPGPLFPWQQLA 187 L AR + + H A R + DP P +L Sbjct: 253 WLL----ARTTVPDYRITTHK--AVDRSGSRSDPRSYDP-TRLY 289 >UniRef50_C4ZEY9 N-acetylmuramoyl-L-alanine amidase n=3 Tax=Clostridiales RepID=C4ZEY9_EUBR3 Length = 248 Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats. Identities = 37/171 (21%), Positives = 67/171 (39%), Gaps = 40/171 (23%) Query: 32 DTRRQAQAAYPRIKVLVIHYTAD---------DFDSSLATLTDKQVSSHYLVPAVPPRYN 82 + + Q A ++ +V+HYTA+ D+ + LA + SSH+++ Sbjct: 85 NPYSRPQKALEKVNGIVVHYTANPGTSARQNRDYFNGLAETKKTKASSHFVIGL------ 138 Query: 83 GKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQI 142 + I Q +P E+++ S N +I IE F + Sbjct: 139 -EGEIVQCIPCNEISY---ASN-----NRNSDTISIE--------CCIEDETGKFNDSTY 181 Query: 143 QALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLF-----PWQQLAQ 188 Q+LI L ++ RY + ++V+ H D+ K P F W+Q + Sbjct: 182 QSLIELTTWLMGRYDLSADDVIRHYDVTG--KKCP-LYFVEHEDAWEQFHK 229 >UniRef50_B5LGB7 Amidase n=10 Tax=unclassified Siphoviridae RepID=B5LGB7_9CAUD Length = 287 Score = 80.0 bits (196), Expect = 8e-14, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 60/197 (30%), Gaps = 55/197 (27%) Query: 35 RQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVS-------------SHYLVPAVPPRY 81 + + + +VIH T D A+ + VS +HY+ Sbjct: 8 HHSAGSNSPVNRVVIHATCPDVGFPSASRKGRAVSTANYFASPSSGGSAHYVCDIRET-- 65 Query: 82 NGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQ 141 Q + E + WHA N S+GIE+ G ++ + Q Sbjct: 66 ------VQCLSESTIGWHA---------PPNPHSLGIEICADGGSHASFRVPGHAYTREQ 110 Query: 142 ---------IQALIPLAKDIIARYHIKPEN------------VVAHADIAPQ----RKDD 176 ++ L + + +Y++ V H D+ DD Sbjct: 111 WLDPRVWPAVERAAVLCRQLCDKYNVPKRKLSAADLKAGKRGVCGHVDVTDAWHQSDHDD 170 Query: 177 PGPLFPWQQLAQQGIGA 193 PGP FPW + G Sbjct: 171 PGPWFPWDRFMAVVNGH 187 >UniRef50_A0YR44 AmpD n=3 Tax=Oscillatoriales RepID=A0YR44_9CYAN Length = 301 Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 39/173 (22%), Positives = 64/173 (36%), Gaps = 34/173 (19%) Query: 46 VLVIHYTADDFDSSLATLT------DKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWH 99 ++V+H TA S++ D Q S H L+ + +VP A+ Sbjct: 134 IVVLHETAATAQSTINFFQTYHTDEDDQASYHTLITLN-------GDVVYIVPPDLRAYG 186 Query: 100 AGISAWRGA---------TRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAK 150 AG S ++G +N+ + + LE G + + AQ Q+L L Sbjct: 187 AGNSVFQGEAVQTDAKFPPSVNNFAYHVSLETPPDGLRNGASHSG-YTTAQYQSLAWLV- 244 Query: 151 DIIARYHIKPENVVAHADIAPQR---KDDPGPLFPWQQLAQQGIGAWPDAQRV 200 A+ I + H A R + DP F QQL Q + +P + + Sbjct: 245 ---AQTGIPENRITTHQ--AVDRSGERSDP-RRFD-QQLFLQLLRRYPQTREI 290 >UniRef50_B1V3W0 N-acetylmuramoyl-L-alanine amidase, family 2 n=8 Tax=Clostridium perfringens RepID=B1V3W0_CLOPE Length = 553 Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 40/191 (20%), Positives = 69/191 (36%), Gaps = 35/191 (18%) Query: 37 AQAAYPRIKVLVIHYTADDFDSS--------LATLTDKQVSSHYLVPAVPPRYNGKPRIW 88 +Q K +VIH T + + A + + S+HY++ + I Sbjct: 83 SQGITINPKYIVIHDTDNRQAGANAMANRNYFANHPNAKASAHYIID--------EGNII 134 Query: 89 QLVPEQELAWHAGISAWRGATRLNDTSIGIEL-ENRGWQKSAGVKYFAPFEPAQIQALIP 147 Q + + WH G N T+I IEL N+G ++ I Sbjct: 135 QALEDTWKGWHVGDGNNPNIN--NSTTIAIELCVNKGNDF-----------DKTLENGIE 181 Query: 148 LAKDIIARYHIKPENVVAHADIAPQRKD-----DPGPLFPWQQLAQQGIGAWPDAQRVNF 202 L K ++ +Y I ENVV H D + + D L+P+ + G + + Sbjct: 182 LTKYLMNKYDIPAENVVMHRDASGKTCSRMMIEDRPSLWPYFKERISGGDGSLEDDGLKP 241 Query: 203 YLAGRAPHTPV 213 + G+ + V Sbjct: 242 KMQGKVTNASV 252 >UniRef50_A9AWP8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AWP8_HERA2 Length = 250 Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 41/168 (24%), Positives = 60/168 (35%), Gaps = 34/168 (20%) Query: 29 YQLDTRRQAQAAYPRIKVL-----VIHYTADDFDSSLATLTD-----KQVSSHYLVPAVP 78 ++ R R K + VIH T + SS D V +HYLV Sbjct: 9 WRKHHRPVGTGWDYRPKGIKPSSAVIHTTNGNRGSSFEAEADYLEASSGVGAHYLV---- 64 Query: 79 PRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFE 138 + +I +++P AWHAG + +N SIGIE + Sbjct: 65 ---GQRGQIAEILPPIYRAWHAGAAK---DDWINSRSIGIE---------CHHAVGEAWT 109 Query: 139 PAQIQALIPLAKDIIARYHIKPENVVAHADIA--PQRKDDPGPLFPWQ 184 Q AL L + ++A + I + H +A RK DP W Sbjct: 110 HEQRAALAWLCQRLMADWSIVLGAIETHRFVALPAGRKPDPS---DWT 154 >UniRef50_C7GYS0 Putative N-acetylmuramoyl-L-alanine amidase CwlA n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYS0_9FIRM Length = 166 Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 43/176 (24%), Positives = 65/176 (36%), Gaps = 35/176 (19%) Query: 33 TRRQAQAAYPRIKVLVIH-----YTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRI 87 T+ + +++ LVIH TA + A + + S+HY V A + Sbjct: 9 TKSSSPRYGNKVRYLVIHWVGAVSTAKNNADYFARV-NPLASAHYFVDAK--------EM 59 Query: 88 WQLVPEQELAWHAGIS--------AWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEP 139 W VP + AW G + T LN S +EL V P Sbjct: 60 WASVPTERAAWSVGGGMMSPRGGKFFGKCTNLNSVS--VELCCIRKNGKVIVD------P 111 Query: 140 AQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFP---WQQLAQQGIG 192 A I+ PL + ++ R I V+ H D+ K PG W++L +Q G Sbjct: 112 AAIKKATPLVRALMKRLKIPAGRVIRHFDVNG--KMCPGGYIDNASWRKLHKQLTG 165 >UniRef50_UPI0001BC309D N-acetylmuramoyl-L-alanine amidase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC309D Length = 221 Score = 78.5 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 33/158 (20%), Positives = 57/158 (36%), Gaps = 35/158 (22%) Query: 30 QLDTRRQAQAAYPRIKVLVIHYTAD---------DFDSSLATLTDKQVSSHYLVPAVPPR 80 ++ + ++ +V+HY + + ++LA L + SSHY+V Sbjct: 68 PVNPYSRPGDKVSKVTAIVVHYVGNPGTTAEQNRSYFNNLAELKNAYASSHYVVGL---- 123 Query: 81 YNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPA 140 + I Q VP E+A+ S N +I IE F Sbjct: 124 ---QGEIIQCVPLDEIAY---ASN-----NRNYDTISIE--------CCHQDAEGRFTDD 164 Query: 141 QIQALIPLAKDIIARYHIKPE-NVVAHADIAPQRKDDP 177 +L+ L + Y + PE +V+ H D+ K P Sbjct: 165 TYNSLVRLVAALCRTYGLNPETDVIRHYDVTG--KLCP 200 >UniRef50_B2SIS3 N-acetylmuramoyl-L-alanine amidase, putative n=20 Tax=Xanthomonadaceae RepID=B2SIS3_XANOP Length = 191 Score = 78.5 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 47/173 (27%), Positives = 68/173 (39%), Gaps = 42/173 (24%) Query: 43 RIKVLVIHYT-------ADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQE 95 +I ++VIH T A ++ + + S HY + I Q V + Sbjct: 29 QIDMVVIHCTELPDMAMAREYGERVLYDSGTGNSGHY-------YLDRNGSIQQYVALER 81 Query: 96 LAWHAGISAWRGATRLNDTSIGIELENRG----WQKSAGVKYFAPFEPAQIQALIPLAKD 151 +A H N ++GIEL NRG W S + P+ AQI ALI L + Sbjct: 82 VAHH--------VRGHNLHTLGIELVNRGRYPHWLDSRHQEMTEPYPEAQIAALISLLQW 133 Query: 152 IIARYHIKPENVVAH----------ADIAP----QRKDDPGPLFPWQQLAQQG 190 + + + H +D AP QRK DPGPLFPW ++ Sbjct: 134 LQQQLP-SVRRIAGHQALDTTQEAASD-APERNIQRKLDPGPLFPWPRIEAAV 184 >UniRef50_A5GSJ2 Putative uncharacterized protein SynRCC307_0948 n=1 Tax=Synechococcus sp. RCC307 RepID=A5GSJ2_SYNR3 Length = 294 Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 72/203 (35%), Gaps = 41/203 (20%) Query: 17 CAGEKGIVEKEGY----QLDTRRQAQAAY----PRIKVLVIHYTADDFDSSLATLTD--- 65 CA + I E+ RR A + V+V+H T +L Sbjct: 79 CAAKLAIRERPTPADPTNFGERRPTDAEGGLVPNQPSVIVLHETVMSLGDTLRFFQTPHP 138 Query: 66 ---KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGAT------------- 109 Q S H L+ + + ++LVP+ + A+ +G SAW + Sbjct: 139 RDADQASYHLLL-------DRRGMAYRLVPDAKRAFGSGWSAWGDGSIRHRPLSSPLAGG 191 Query: 110 RLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADI 169 +N+ ++ + LE+ + + + AQ + L R+ I + HA Sbjct: 192 SINNVALHLSLESPADGRGDDDAHSG-YSRAQYERLAEHVLIWQLRWGIPMRRITTHA-- 248 Query: 170 APQR---KDDPGPLFPWQQLAQQ 189 A R + DP F W++ + Sbjct: 249 AVDRSHSRRDP-RSFRWERFDRA 270 >UniRef50_B0MAX7 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MAX7_9FIRM Length = 246 Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 62/164 (37%), Gaps = 36/164 (21%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLATLT-----DKQVSSHYLVPAVPPRYNGKPRI 87 + + + I +V+HYT + D++L K S+HY V +G + Sbjct: 13 SNYGGKRSTKDIDYIVVHYTGNSKDTALNNCKYFQGASKGASAHYFV-------DGGKYV 65 Query: 88 WQLVPEQELAWHAG--------ISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEP 139 ++ V +AW G + N S+ +E+ N + A V+ Sbjct: 66 YKSVAVNRVAWAVGGCYSTVGAAGNY-YKKCTNANSLSVEMCNVTRKVPANVR------- 117 Query: 140 AQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPW 183 I L K ++ +Y + +V+ H D+ K+ P PW Sbjct: 118 ---DQTIELVKFLMQKYGVPASHVIRHWDVNG--KNCP---MPW 153 >UniRef50_C0CQ24 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=C0CQ24_9FIRM Length = 279 Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 64/172 (37%), Gaps = 38/172 (22%) Query: 30 QLDTRRQAQAAYPRIKVLVIHYTAD---------DFDSSLATLTDKQVSSHYLVPAVPPR 80 ++ + +K + IHYTA+ D+ L +VSSH++V Sbjct: 119 TVNPYSRPGTPLEEVKYVAIHYTANPGSTAKNNRDYFEGLKDNHSNEVSSHFVVGL---- 174 Query: 81 YNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPA 140 + I Q +P E+ S + ++ SI + + F A Sbjct: 175 ---EGEIVQCIPTNEI------SYATNSRNVDTLSI----------ECCHLDETGKFNEA 215 Query: 141 QIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFP----WQQLAQ 188 Q+L+ L + R+ + ++V+ H D+ K+ P W+QL + Sbjct: 216 TYQSLVELTAYLCNRFGLDIDHVIRHYDVTG--KNCPKYYVEHPEAWEQLKK 265 >UniRef50_A8E261 Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Enterococcus phage phiEF24C RepID=A8E261_BPPHE Length = 289 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 52/153 (33%), Gaps = 30/153 (19%) Query: 37 AQAAYPRIKVLVIHYTADDFDSSLA--TLTDKQV--SSHYLVPAVPPRYNGKPRIWQLVP 92 ++ P I +++H+ A L S+HY I V Sbjct: 22 SRNGIP-IDTIILHHNATTNKDVAMNTWLLGGGAGTSAHY--------ECTPTEIIGCVG 72 Query: 93 EQELAWHAGISAWRGAT-----RLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIP 147 EQ A+HAG + G N SIGIE N + V P I Sbjct: 73 EQYSAFHAGGT--GGIDVPKIANPNQRSIGIENVNSSGAPNWSVD------PRTITNCAR 124 Query: 148 LAKDIIARYHIK--PENVVAHADIAPQRKDDPG 178 L DI RY I ++V+ H ++ PG Sbjct: 125 LVADICTRYGIPCDRQHVLGHNEVTAT--ACPG 155 >UniRef50_A0LPT1 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LPT1_SYNFM Length = 288 Score = 76.9 bits (188), Expect = 6e-13, Method: Composition-based stats. Identities = 37/159 (23%), Positives = 62/159 (38%), Gaps = 26/159 (16%) Query: 40 AYPRIKVLVIHYTADDFDSS--LATLTDKQ-----VSSHYLVPAVPPRYNGKPRIWQLVP 92 + K ++IH+TA D ++ + + + + H+L+ G +I Sbjct: 137 PNSQWKYIIIHHTATDIGNASLIDRTHEDRGFWYGLGYHFLIDNGTLGK-GDGQI----- 190 Query: 93 EQELAW---HAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLA 149 E W G G +ND IGI L ++ +Q+++L L Sbjct: 191 EASPRWVKQQCGAHCKAG--GMNDKGIGIALVGNFNEEQP--------SSSQLRSLDYLL 240 Query: 150 KDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQ 188 K ++ Y I VV H D+ D PG FPWQ + + Sbjct: 241 KTLMDYYRIPAGRVVGHRDVDGAATDCPGRRFPWQTVRR 279 >UniRef50_B0C6S0 N-acetyl-anhydromuramyl-L-alanine amidase, putative n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C6S0_ACAM1 Length = 298 Score = 76.9 bits (188), Expect = 6e-13, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 59/161 (36%), Gaps = 33/161 (20%) Query: 46 VLVIHYTADDFDSSLATLT------DKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWH 99 ++V+H T S++ + Q S H L+ I LVP + A+ Sbjct: 140 LIVLHETVGSGMSAIRHFQTPHPRDEDQASYHALIFL-------DGTIVYLVPPEHRAFG 192 Query: 100 AGISAWRGAT-------------RLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALI 146 AG S + GA +N+ + I LE G + + +Q Q+L Sbjct: 193 AGNSVFIGANGPEAVKTNPDLPASVNNFAYHIALETPPDGNHNGPSHGG-YSESQYQSLA 251 Query: 147 PLAKDIIARYHIKPENVVAHADIAP-QRKDDPGPLFPWQQL 186 L IAR + + + HA + + DP F + + Sbjct: 252 WL----IARTGVPSQRITTHAKVDRSGERSDP-RSFDFSKF 287 >UniRef50_C7N142 Negative regulator of beta-lactamase expression n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N142_SLAHD Length = 296 Score = 76.9 bits (188), Expect = 7e-13, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 58/175 (33%), Gaps = 50/175 (28%) Query: 32 DTRRQAQAAYPRIKVLVIHYTAD--DFDSSLATL--TDKQVSSHYLVPAVPPRYNGKPRI 87 D+ + K +V+H T +A V++H+++ N I Sbjct: 121 DSFVHGEKGAEYQKYIVLHDTEGEGSAAGVVAYWDGNGAGVAAHFII-------NKDGTI 173 Query: 88 WQLVPEQELAWHAG-------------------------ISAWRGATRLNDTSIGIELEN 122 Q VP ++ HAG I W +N SIGIE+ + Sbjct: 174 VQCVPLDKITHHAGFGDTGHNELYGVQDESRDDKMGTVPIGDWAADYGMNSYSIGIEMVH 233 Query: 123 RGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENV------VAHADIAP 171 G + AQ++AL L I A Y + + ++D +P Sbjct: 234 VGGS--------GDYPEAQLEALDGLIAYIDAYYGFESAIIDHKAWRTGNSDTSP 280 >UniRef50_C7MM46 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MM46_CRYCD Length = 339 Score = 76.9 bits (188), Expect = 8e-13, Method: Composition-based stats. Identities = 39/165 (23%), Positives = 65/165 (39%), Gaps = 31/165 (18%) Query: 39 AAYPRIKVLVIHYTADDF----DSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQ 94 R + + +HYT++ ++S A + S HY++ +QL+ + Sbjct: 16 PGGNRCEYIAVHYTSNSAPARSEASYAQNSQHSSSYHYVLDGYEC--------YQLLNDT 67 Query: 95 ELAWHAGISAWRGATRL--NDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDI 152 + AW + W G T+L N +I IE+ N G F A+ L L + Sbjct: 68 DTAW--AVGTWPGYTQLISNRQAISIEVCNAG----------GSFSDAERDQLRELVALL 115 Query: 153 IARYHIKPENVVAHADIAPQRKDDP-----GPLFPWQQLAQQGIG 192 + R+ I ++VV H D RK+ P W +L G Sbjct: 116 MERHSIDADHVVRHWDCHTGRKECPEYYAGAKSNEWSELHDYITG 160 >UniRef50_Q925X1 Lin2374 protein n=2 Tax=Listeria RepID=Q925X1_LISIN Length = 316 Score = 76.5 bits (187), Expect = 9e-13, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 65/170 (38%), Gaps = 40/170 (23%) Query: 31 LDTRRQAQAAYP--RIKVLVIHYTADDFDSS------LATLTDKQVSSHYLVPAVPPRYN 82 ++ + ++ Y R+ +V+HYTA+ S+ L ++ S+H + Sbjct: 9 INKNQFSRPGYKLLRVSKIVMHYTANPGASADNHRRYFRDLKERYASAHIFIDDNEAIC- 67 Query: 83 GKPRIWQLVPEQELAWHAGI------------SAWRGATRLNDTSIGIELENRGWQKSAG 130 ++P E+A+HA S +RG N TSIGIE+ Sbjct: 68 -------IIPLNEVAYHANERSCKLTALQASTSYYRG-GNANLTSIGIEMC--------- 110 Query: 131 VKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPL 180 + A + +A ++ Y + +++ H D+ K+ P P Sbjct: 111 LDKNGNITAATFNRSVDVAAELCKTYDLTASDIIRHYDVTG--KNCPAPW 158 >UniRef50_C3EV93 N-acetylmuramoyl-L-alanine amidase n=11 Tax=Bacillus thuringiensis RepID=C3EV93_BACTK Length = 318 Score = 76.5 bits (187), Expect = 9e-13, Method: Composition-based stats. Identities = 42/159 (26%), Positives = 59/159 (37%), Gaps = 35/159 (22%) Query: 34 RRQAQAAYPRIKVLVIHYTADDFDSSLATLT---------DKQVSSHYLVPAVPPRYNGK 84 R A + + IH TA+ + A VS H+ V Sbjct: 23 NRNRPAYSMNPRYITIHTTANQNAGTDARAHARYVNNGGGSSSVSWHFTVD--------D 74 Query: 85 PRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIEL-ENRGWQKSAGVKYFAPFEPAQIQ 143 RI Q +P E WHAG G N +SIGIE+ ENR + + Sbjct: 75 NRIVQHLPLNENGWHAGDGNGAG----NRSSIGIEICENRDGNFEKALTH---------- 120 Query: 144 ALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFP 182 L K ++A +K NVV+H + K+ P P+F Sbjct: 121 -AAGLVKFLMAHLGLKIGNVVSHQHWSG--KNCPRPIFN 156 >UniRef50_Q30PL8 Negative regulator of AmpC, AmpD n=4 Tax=Bacteria RepID=Q30PL8_SULDN Length = 219 Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 69/184 (37%), Gaps = 58/184 (31%) Query: 29 YQLDTRRQAQAAYPRIKVLVIHYTA-DDFDSSLATLTDK---------------QVSSHY 72 Y LD + K++VIH+TA DDF++SL+ D+ VS+H+ Sbjct: 43 YNLD----VKDIKITPKIIVIHHTAIDDFNASLSCFKDQTLPNARADIHRGGALNVSAHF 98 Query: 73 LVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVK 132 +V + I QL+P +A H LN SIGIE G Sbjct: 99 IV-------DRDGTIHQLMPLDIMARH--------VIGLNYNSIGIENVG-------GQN 136 Query: 133 YFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIA---------------PQRKDDP 177 P Q++A I L ++ R+ + + V+ H + KDDP Sbjct: 137 SKDNLTPEQLRANIELVAELKRRFP-EIDYVIGHYEYRCFEKDELWLEVDKKYRTYKDDP 195 Query: 178 GPLF 181 F Sbjct: 196 SSRF 199 >UniRef50_B8HPP1 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HPP1_CYAP4 Length = 288 Score = 76.1 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 69/207 (33%), Gaps = 39/207 (18%) Query: 28 GYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTD------KQVSSHYLVPAVPPRY 81 G + + ++V+H T S++ +Q S H L+ Sbjct: 91 GPRFSQDVYGRPVRNAP-LVVLHETVGSGSSAIQMFRSPQPDESRQASYHALIL------ 143 Query: 82 NGKPRIWQLVPEQELAWHAGISAWRGAT-------------RLNDTSIGIELENRGWQKS 128 I LVP A+ AG S +RGA +N+ + I LE + Sbjct: 144 -RDGTIVYLVPGTMRAFGAGNSIFRGANGPEAVKTHPRFPASVNNFAYHISLETPPNGNN 202 Query: 129 AGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQR---KDDPGPLFPWQQ 185 ++ + P Q Q+L L A + + + H A R + DP F + Sbjct: 203 NASRHSG-YTPNQYQSLAVLT----ACTRVPSDRITTHK--AVDRSGSRMDP-RSFD-DR 253 Query: 186 LAQQGIGAWPDAQRVNFYLAGRAPHTP 212 L ++ + + Q + A P Sbjct: 254 LFRRLLDVYLQNQPLIDACAANPWTRP 280 >UniRef50_Q9ZX49 Gp29 n=1 Tax=Mycobacterium phage TM4 RepID=Q9ZX49_BPMT4 Length = 547 Score = 75.8 bits (185), Expect = 1e-12, Method: Composition-based stats. Identities = 35/140 (25%), Positives = 57/140 (40%), Gaps = 19/140 (13%) Query: 47 LVIHYTADDFDSSLATLTDKQVSSH-YLVPAVPPRYNGKPRIWQL-VPEQELAWHAGISA 104 +V H+T D S +++ H L + V +AWHAG+ + Sbjct: 223 VVCHHTGSDNTPS------SEIAFHPSLGLCSQIHLARNGTVTLCGVG---IAWHAGVGS 273 Query: 105 WRG--ATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPEN 162 + G N +IGIE +N G G + + AQ A + I R ++ ++ Sbjct: 274 YPGLPEDNANAVTIGIEAQNSG--TYDGAPHRTNWPDAQYDAYVKCCAAICRRLGVRADH 331 Query: 163 VVAHADIAPQRKD---DPGP 179 V++H + A RK DPG Sbjct: 332 VISHKEWA-GRKQGKWDPGA 350 >UniRef50_UPI0001C1705F AmpD n=2 Tax=Nostocaceae RepID=UPI0001C1705F Length = 285 Score = 75.8 bits (185), Expect = 1e-12, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 67/195 (34%), Gaps = 37/195 (18%) Query: 18 AGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQV------SSH 71 A + G + + A + ++V+H T S++ + V S H Sbjct: 90 AAAQVHPSNYGERFSRDTKGMAVSNQP-IIVLHETTYSARSAINYFQNHNVDEDIQASYH 148 Query: 72 YLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRG--------------ATRLNDTSIG 117 ++ + LVP + A+ AG S ++ A +N+ + Sbjct: 149 AIIA-------RDGTVIYLVPPDKRAFGAGNSVFKNTDGTIETVQTNPKLAPSVNNFAYH 201 Query: 118 IELENRGWQK-SAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHA--DIAPQRK 174 + LE ++ + + Q +L L IA+ + + H D+A K Sbjct: 202 VSLETPPDGWGKRDIREHSGYTQEQYNSLAWL----IAQSQVPDNRITTHRAVDVANG-K 256 Query: 175 DDPGPLFPWQQLAQQ 189 DP F + + ++ Sbjct: 257 VDP-LSFDFDRFFKK 270 >UniRef50_C4KDJ8 Peptidoglycan-binding domain 1 protein n=1 Tax=Thauera sp. MZ1T RepID=C4KDJ8_THASP Length = 274 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 43/221 (19%), Positives = 66/221 (29%), Gaps = 24/221 (10%) Query: 44 IKVLVIHYTADDFDS---SLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHA 100 +K ++ H+TA SL L + + + P + V A HA Sbjct: 36 VKGVICHHTAGPRSGNMPSLGVLKNGR--ADLAGPLAQLGLGRDGTFY--VIAAGRANHA 91 Query: 101 GISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKP 160 G W+G T N + IGIE E+ G F P+ Q+ A I+A Sbjct: 92 GRGEWKGITDGNGSFIGIEAESTGIGD-PTKPGFEPWPEVQLDAYRRGVAAILAHLGQDA 150 Query: 161 ENVVAHADIA--PQRKDDPGPLFPWQQLAQQGIGAWP------------DAQRVNFYLAG 206 H + A RK DP L ++ + DA+ G Sbjct: 151 GMCCGHKEYALPKGRKSDPHTL-DMERFRSEVAALMSGAAAPVPSIPRKDAEDRPTIRRG 209 Query: 207 RAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQM 247 + + L +G + FQ Sbjct: 210 ATGNPIFLVKEVQRKLG-FGAQQVDGAFGPLTEAAMRRFQR 249 >UniRef50_Q331X1 Putative N-acetylmuramoyl-L-alanine amidase n=2 Tax=root RepID=Q331X1_CBCP Length = 309 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 51/239 (21%), Positives = 74/239 (30%), Gaps = 52/239 (21%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQV--------SSHYLVPAVPPRYNGK 84 T AQ +VIH T ++ + L + S+HY V Sbjct: 10 TSHGAQGGANYPTWIVIHETDNEDKGA-NALCHARALANGNLSCSAHYYVDESN------ 62 Query: 85 PRIWQLVPEQELAW----HAGISAWRGATRL----NDTSIGIEL-ENRGWQKSAGVKYFA 135 I Q V E W H G+ G + N SIGIE+ N+ S + Sbjct: 63 --IVQ-VHEH---WTVTSHVGVKY--GTPPIGGIGNKNSIGIEICVNKDGNYSQARQN-- 112 Query: 136 PFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFP----WQQLAQQGI 191 I L K +I+ I VV H D +K P + W Q Sbjct: 113 ---------AIELTKYLISTTKIPASRVVRHYD--ACKKYCPRKMLDSLSLWNDFKSQIS 161 Query: 192 GAWPDAQRVNFYLAGRAPHTPVD-TASLLELLARYGYDV--KPDMTPREQRRVIMAFQM 247 G VN + D L L + GY + + + +++FQ Sbjct: 162 GNSQSNPSVNSSSGLLKVGSREDKVKQLQANLNKLGYTCGNADGIFGQGTKNAVISFQR 220 >UniRef50_C0WEF9 Putative uncharacterized protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WEF9_9FIRM Length = 221 Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 70/218 (32%), Gaps = 54/218 (24%) Query: 2 RRFFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAA-------------------YP 42 R A LL + C + E + + AQ+ Sbjct: 4 RLLILFSCALLLPSACGFSAPGKKAERPAIIQKYVAQSPKRNTLMKAYSKLHYGREMTDI 63 Query: 43 RIKVLVIHYTADDFDSSLATL----TDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAW 98 + + +V+H+TA+D + ++S L IWQL+PE LA Sbjct: 64 KPRAVVVHWTANDSQEGTYQFFYAEENPRLSYGTLNVGAQFLVGRDGAIWQLMPETALAR 123 Query: 99 HAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHI 158 HA LN +IGIE G + AQ++A I L + +Y Sbjct: 124 HA--------IGLNWCAIGIENVG-------GARGKEDLTEAQLRANIALISYLKDKYP- 167 Query: 159 KPENVVAHA-------------DIAPQR--KDDPGPLF 181 V+ H D+ K DPGP F Sbjct: 168 TLTTVLGHYEQDKAKQTDLWREDVPNYYHGKIDPGPTF 205 >UniRef50_UPI0001979E35 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI0001979E35 Length = 180 Score = 74.6 bits (182), Expect = 3e-12, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 55/137 (40%), Gaps = 15/137 (10%) Query: 38 QAAYPRIKVLVIHYT-ADDFDSSLATLTDKQVS---SHYLVPAVPPRYNGKPRIWQLVPE 93 +I+ +++H T + SS+ + + +H+++ + I+Q Sbjct: 39 HGEIGKIRAIILHRTMSKSAQSSIDWWQNHKAKGAGTHFMI-------DKDGTIYQCATL 91 Query: 94 QELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDII 153 + WH G +G T N+TSIGIE+ + Q AL + K ++ Sbjct: 92 YKTTWHVGARK-KGITITNNTSIGIEVV---AWYDDKTHKWDEATREQKIALRKIIKILL 147 Query: 154 ARYHIKPENVVAHADIA 170 Y++ ++ H IA Sbjct: 148 KHYNLTENDIYEHDKIA 164 >UniRef50_Q7NG55 Glr3318 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NG55_GLOVI Length = 228 Score = 73.8 bits (180), Expect = 6e-12, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 65/177 (36%), Gaps = 57/177 (32%) Query: 44 IKVLVIHYTA-DDFDSSLATLTDKQ---------------VSSHYLVPAVPPRYNGKPRI 87 +++V+H+T + S+ AT T + VS+H++V + I Sbjct: 68 PRMVVVHWTGDGNLTSAFATFTPDRLPSVRADLKKGGALNVSTHFVV-------DRDGTI 120 Query: 88 WQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIP 147 ++L+ E+ LA H LN T+IGIE P AQ+ A Sbjct: 121 YRLMDEKRLARH--------VIGLNWTAIGIENIGGPR---------RPLTDAQLAANAW 163 Query: 148 LAKDIIARYHIKPENVVAHADIAPQR---------------KDDPGPLFPWQQLAQQ 189 L +D+ R+ ++ H + R K DPG F +L + Sbjct: 164 LVRDLANRHP-TIAYLIGHHEYGRFRGSLLWRERVAGYFTGKSDPGADF-MARLRAR 218 >UniRef50_D2QH68 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QH68_9SPHI Length = 229 Score = 73.8 bits (180), Expect = 6e-12, Method: Composition-based stats. Identities = 50/221 (22%), Positives = 79/221 (35%), Gaps = 62/221 (28%) Query: 1 MRRFFWLVAAALLLAGCAGEKGI-----------VEKEGYQLD---TRRQAQAAYPRIK- 45 +R +AA L L C+ + + E++ LD R Q A P IK Sbjct: 10 LRCQLACIAAFLSLTVCSAQPPVFRIIEKPIVFDEERKQLSLDYLARRHGVQQAEPYIKP 69 Query: 46 -VLVIHYTA-DDFDSSLATLT--------DKQVSSHYLVPAVPPRYNGKPRIWQLVPEQE 95 ++V+H+TA ++ D Q +S + +VP + I++L+P+ Sbjct: 70 KMIVLHWTAVPTLRAAFDLFNPSVLTGRADLQAASRLNI-SVPFLVDRDGTIYRLLPDTV 128 Query: 96 LAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIAR 155 A H LN +IGIE AQ+ A + L + + R Sbjct: 129 FARHC--------IGLNHCAIGIENVGNDNL-----------TDAQLDANVQLVRYLKQR 169 Query: 156 YHIKPENVVAHADI-----AP----------QRKDDPGPLF 181 Y I E ++ H + P K DPG F Sbjct: 170 YAI--EYLIGHYEYKDFIGTPLWKETDSTYLTGKTDPGREF 208 >UniRef50_Q04T28 Amidase n=4 Tax=Leptospira RepID=Q04T28_LEPBJ Length = 188 Score = 73.1 bits (178), Expect = 9e-12, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 61/184 (33%), Gaps = 40/184 (21%) Query: 30 QLDTRRQAQAAYP--RIKVLVIHYTAD---------DFDSSLATLTDKQVSSHYLVPAVP 78 L ++ +K +V+H+TA D+ SL + S+H+ V V Sbjct: 12 FLTPNPHSRPGDKIKEVKGIVLHWTALPNATAQNIRDYFESLKAPEGRFASAHFAVGLV- 70 Query: 79 PRYNGKPRIWQLVPEQELAWHAGISAW-------RGATRLNDTSIGIELENRGWQKSAGV 131 I Q +P E+A+H G + G N +IGIE Sbjct: 71 ------GEIVQCIPLDEIAYHCGSRTYTSEKEKRLGPDSPNFYTIGIE--------QCVQ 116 Query: 132 KYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDP-----GPLFPWQQL 186 F + + L + +Y++ ++ H I KD P P W Sbjct: 117 DMTGKFTEKTLDSAARLTAQLCLKYNLDVNDLWTHQGI-VGWKDCPRWYNTHPK-DWIGF 174 Query: 187 AQQG 190 ++ Sbjct: 175 KKRV 178 >UniRef50_B1ZXM8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZXM8_OPITP Length = 285 Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 63/219 (28%), Gaps = 92/219 (42%) Query: 44 IKVLVIHYTADDFDS-SLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGI 102 + LV+HY A S L + +S H+L+ + ++Q + +E A HA + Sbjct: 74 VDQLVVHYDACGLSSVCFDVLQQRGLSVHFLI-------DIDGTVYQTMDLREKAGHATV 126 Query: 103 SAWRGATRLNDTSIGIELENRGW---------------QKSAGVKYFAP----------- 136 + ND SIGIEL N G G + P Sbjct: 127 A--------NDRSIGIELANIGAYPPREAGPLAEWYRVASGGGAQIVVPARTKEPRVRTP 178 Query: 137 -------------------------FEPAQIQALIPLAKDIIARYHIKP----------- 160 F P Q ALI L + + Sbjct: 179 GFIGRPARSEPIRGVIQGRELVQYDFTPQQYAALIRLTAALCREFPRLRCEVPRRADGAV 238 Query: 161 -------------ENVVAHADIAPQRKDDPGPLFPWQQL 186 ++ H + + K DPGP F W + Sbjct: 239 LAEKLPDAELARYRGILGHWHVQ-ENKVDPGPAFEWARF 276 >UniRef50_C8RU72 Prophage LambdaSa2, lysin n=1 Tax=Corynebacterium jeikeium ATCC 43734 RepID=C8RU72_CORJE Length = 280 Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 37/146 (25%), Positives = 56/146 (38%), Gaps = 26/146 (17%) Query: 31 LDTRRQAQAAYPRIKVLVIHYTADDF--DSSLATLTDKQVSSHYLVPAVPPRYNGKPRIW 88 ++ A + +I ++IH+ A + S +Q S+HY V + RI Sbjct: 15 MNKHYSAGRSGRKINKVIIHHNAGNLTIKSIWDVWQTRQASAHYQV-------DSNGRIG 67 Query: 89 QLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPL 148 QLV +++ AWHAG W N TSIGIE S+ A + L Sbjct: 68 QLVWDRDTAWHAG--NW----DANTTSIGIEH----ADISSKPWRI---SEACLDNGAHL 114 Query: 149 AKDIIARYHIKP----ENVVAHADIA 170 I Y + +NV H + Sbjct: 115 VAAICHYYKLGRPVWGKNVFGHKHFS 140 >UniRef50_P36550 N-acetylmuramoyl-L-alanine amidase cwlL n=4 Tax=Bacillus licheniformis RepID=CWLL_BACLI Length = 360 Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 57/156 (36%), Gaps = 43/156 (27%) Query: 44 IKVLVIHYTADDFDSSLA----------TLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPE 93 +K +V+HYTA S+L + K S+HY V + ++PE Sbjct: 24 VKGIVMHYTATPGASALNERDYFNGTCIAIKRKASSAHYFVDRKEAQ--------HIIPE 75 Query: 94 QELAWHAGISAWRGATRL---------NDTSIGIELENRGWQKSAGVKYFAPFEPAQIQA 144 E+A+HA R N SI +E+ + G+ + +Q Sbjct: 76 NEVAYHA-----HDKNRCYVSFLKPNANTKSISVEMC----VEKDGMIHSE-----TVQN 121 Query: 145 LIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPL 180 L D+ RY + +V H D+ K P P Sbjct: 122 AAELVADLCKRYGLSTNKIVRHYDV--TNKICPAPW 155 >UniRef50_A1ZRL2 Putative peptidoglycan binding domain protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZRL2_9SPHI Length = 338 Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 59/163 (36%), Gaps = 45/163 (27%) Query: 26 KEGYQLDTRRQAQAAYPRIKVLVIHYTAD--DFDSSLATLTD--KQVSSHYLVPAVPPRY 81 + G D+ K +VIH+TA ++ ++V++ +++ Sbjct: 143 RLGQYYDSVYPK-------KQIVIHHTAGGPSATATKNWWDSNPQRVATDFII------- 188 Query: 82 NGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGV---------- 131 + + ++ P+ AWH G+ G L+ +IGIE+ N G+ G Sbjct: 189 DQNGSVIRVFPKGYWAWHIGL----GRPDLDSQAIGIEVCNYGYLTKQGTIFRNAYGGIV 244 Query: 132 -------------KYFAPFEPAQIQALIPLAKDIIARYHIKPE 161 Y+ + AQ +L L + +I Y I Sbjct: 245 NNVYTLAEPYKGHVYYENYTDAQFASLDKLLRALIDEYEIPLN 287 >UniRef50_C0Z5F5 Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z5F5_BREBN Length = 278 Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 65/162 (40%), Gaps = 36/162 (22%) Query: 30 QLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQ-------VSSHYLVPAVPPRYN 82 +++R + + K +VIH+TA++ + AT S+HY+V Sbjct: 10 NVNSRPKKKIV---PKGVVIHWTANERSGANATANRNYFNKPTTVASAHYIVD------- 59 Query: 83 GKPRIWQLVPEQELAWHAGISAW------RGATRLNDTSIGIELENRGWQKSAGVKYFAP 136 +I + +PE E+ +H G + + + N+ +IGIE+ A Sbjct: 60 -DKQIIRCLPEDEMGYHVGAQTYSQAALNKLSNYPNNCTIGIEMCVNADGSFA------- 111 Query: 137 FEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPG 178 + + L DI+ R+ E++ H DI K+ P Sbjct: 112 ---KMYEQTVALTADILKRHGWGVEHLWRHYDITG--KNCPA 148 >UniRef50_C2BV37 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Mobiluncus RepID=C2BV37_9ACTO Length = 271 Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 69/213 (32%), Gaps = 47/213 (22%) Query: 31 LDTRRQAQAAYPRIKVLVIHYTADDFD--SSLATLTDKQVSSHYLVPAVPPRYNGKPRIW 88 ++ I +++H+ + + S+HY V RI Sbjct: 15 MNKHFTKGRQGRSINKIILHHNDGNLSIQGCWNVWQTRPASAHYQVETS-------GRIG 67 Query: 89 QLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPL 148 QLV +++ AWHAG W N TSIGIE + + A ++ L Sbjct: 68 QLVWDRDTAWHAG--NWVA----NTTSIGIEH-------ADASTHPYRISDACLENGAHL 114 Query: 149 AKDIIARYHIKP----ENVVAHAD---------IAPQRKDDPGPLFPWQQLAQQGIGAWP 195 + Y + +NV H D IA + +A+ G W Sbjct: 115 VAALCHYYKLGRPVWGKNVFGHRDFSATECPASIAGSQHG--------AYMARAGY--WY 164 Query: 196 DAQRVNFYLAGRAPHTPVDTASLLELLARYGYD 228 D +++ + D +L + R Y Sbjct: 165 D--QISGNKPQASSAGKPDIEALANAVIRGEYG 195 >UniRef50_A3DJ52 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=3 Tax=Clostridium thermocellum RepID=A3DJ52_CLOTH Length = 252 Score = 71.9 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 81/210 (38%), Gaps = 48/210 (22%) Query: 32 DTRRQAQAAYPRI-KVLVIHYTADDFDSSLATLT--DKQVS-SHYLVPAVPPRYNGKPRI 87 ++ + RI +++V H + S ++ T + +VS +H+ V +I Sbjct: 22 NSYTNKSSRNQRIPEIIVNHISEGSMSSMISWFTSPNNKVSSAHFGVSK-------TGKI 74 Query: 88 WQLVPEQELAWHAGISAW------------RGATRLNDTSIGIELENRGWQKSAGVKYFA 135 +Q V ++ AW G+++ + N S+ IE E + + Sbjct: 75 YQFVAIEDCAWANGLTSGIENATAELVLKKGESENPNWYSVSIEHEGVWSETKGAL---- 130 Query: 136 PFEPAQIQALIPLAKDII----ARYH----IKPENVVAHADIAPQ-RKDDPGPLFPWQQ- 185 P Q++A L II +Y + ++ H +I R + PG LFP+++ Sbjct: 131 --TPEQLEATKMLHLYIIEYVKEKYGHEIVPSRKTIIGHHEIDKSQRANCPGELFPYREI 188 Query: 186 ---LAQQGI------GAWPDAQRVNFYLAG 206 L G+ G W + V+ Y G Sbjct: 189 IDFLTYYGLPFKDIKGHWAEDLIVSAYEQG 218 >UniRef50_UPI0001693C62 N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001693C62 Length = 257 Score = 71.9 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 68/178 (38%), Gaps = 43/178 (24%) Query: 18 AGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYT------ADDFDSSLATLTDKQVSSH 71 G + + ++ ++ + + LV H T A + + T+T++ S+H Sbjct: 2 NGNQYSITQDYIRIRDNTRPGSKLRGPVFLVAHDTGNPGSTARNNRNYFNTMTERSASAH 61 Query: 72 YLVPAVPPRYNGKPRIWQLVPEQELAWHA-----------GISAWRGATRLNDTSIGIEL 120 + I +++P E AWH G SA ND ++G+EL Sbjct: 62 VFID--------DTEILEIIPLNEKAWHVRYDVPTDKRLYGCSA-------NDAAVGVEL 106 Query: 121 ENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKP-ENVVAHADIAPQRKDDP 177 G FE A + + + ++ + P +++V+H + P RK DP Sbjct: 107 CYGGHIH---------FEKA-YRRYVWYFAYLCRKFDLNPRKHIVSHKTLDPGRKVDP 154 >UniRef50_A7VR21 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VR21_9CLOT Length = 214 Score = 71.5 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 56/158 (35%), Gaps = 33/158 (20%) Query: 27 EGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATL-------TDKQVSSHYLVPAVPP 79 Y + ++ + IH TA+ + + A T +VS HY V Sbjct: 63 TAYIPEDSPGRPGVLRTVESITIHETANTSEGADAEAHSDYLSTTSDEVSWHYTVD---- 118 Query: 80 RYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEP 139 +I+Q +P+ E AWH+G N +SIGIEL Sbjct: 119 ----DHQIYQHLPDNEEAWHSG-----DREG-NHSSIGIELCVNADGNF----------D 158 Query: 140 AQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDP 177 ++ L ++ Y + ++V H D KD P Sbjct: 159 QTMENAAKLTAFLLKEYDLTIDDVKQHYDFNG--KDCP 194 >UniRef50_D0LVX2 Putative uncharacterized protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LVX2_HALO1 Length = 279 Score = 71.5 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 39/188 (20%), Positives = 65/188 (34%), Gaps = 55/188 (29%) Query: 34 RRQAQAAYPRIKVLVIHYTAD-DFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVP 92 RR+ + + + V+H+ L ++ +S H LV +G ++Q + Sbjct: 98 RRRRDPSGKAVNLFVLHWDGCTSAHQCFHVLVERGLSVHLLV-------DGDGTVYQTLD 150 Query: 93 EQEL-AWHAGISAWRGATRLNDTSIGIELENR------------------GWQKSAGVKY 133 E AWHAG R+N+ SIG+E++N +G Sbjct: 151 LLEASAWHAG--------RVNERSIGVEIQNPVKLHRNQWQDPPRDVVEEERVHGSGSWQ 202 Query: 134 FAPFEPAQIQALIPLAKDIIARYHIKP------------------ENVVAHADIAPQRKD 175 F Q ++ LA+ + I V H ++P K Sbjct: 203 HLDFYEVQKHRIVQLAEVLCELLPIPRKLPMDGNRVSRSLSSPRFHGVCGHYHVSPT-KP 261 Query: 176 DPG-PLFP 182 DPG L+P Sbjct: 262 DPGLTLWP 269 >UniRef50_B9XEI5 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=bacterium Ellin514 RepID=B9XEI5_9BACT Length = 369 Score = 71.5 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 58/220 (26%), Gaps = 93/220 (42%) Query: 44 IKVLVIHY-TADDFDSSLATLTDKQ-VSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAG 101 + V+H+ L D + +S H+++ + I+Q + +E AWHA Sbjct: 134 VDQFVLHFDVCGTSRQCFNILQDHRDLSVHFML-------DVDGTIYQTLDLKERAWHAT 186 Query: 102 ISAWRGATRLNDTSIGIELENRGWQKSAGVK----------------------------- 132 S N+ S+GIE+ N G + Sbjct: 187 TS--------NNRSVGIEIANIGAYSNEEKSPLGEWYKQEKGRTRITIPESFGGDSALRT 238 Query: 133 ----------------------YFAPFEPAQIQALIPLAKDIIARYHIKP---------- 160 + P Q +AL L + + Sbjct: 239 KGFVGYSARPEPVKGVIQGRELTQYDYTPEQYEALAHLTAALCKIFPKITCDYPKDTSGN 298 Query: 161 --------------ENVVAHADIAPQRKDDPGPLFPWQQL 186 V+ H + K DPGP W +L Sbjct: 299 LITHKLSDADLKNYHGVMGHYHVQ-TDKVDPGPALQWDRL 337 >UniRef50_C6JDZ2 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDZ2_9FIRM Length = 253 Score = 71.1 bits (173), Expect = 3e-11, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 73/240 (30%), Gaps = 45/240 (18%) Query: 29 YQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTD--------KQVSSHYLVPAVPPR 80 + R PR +VIH T + + A S+H V Sbjct: 6 QYISERNSYSGQIPR--YIVIHNTDNYSTGADARAHAMAQYHGNFDGYSAHVYVDDKSA- 62 Query: 81 YNGKPRIWQLVPEQELAWHAGISAWRGA---TRLNDTSIGIELENRGWQKSAGVKYFAPF 137 +Q +P AWH G+ + G T N S+GIE+ AG Y F Sbjct: 63 -------YQAMPYSRGAWHVGV-NYGGRLFGTVNNRNSVGIEMC-----VQAGFDYDKAF 109 Query: 138 EPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPG---PLFPWQQLAQQGIGAW 194 + + +++ +I + VV H D+ K+ P W + + G Sbjct: 110 -----ANTAEVCRQLMSELNIPADRVVQHYDVCA--KNCPSAIRAKNDWNRFKKLIQGKE 162 Query: 195 PDAQRVNFYLAGRAPHTPVD--------TASLLELLARYGYDVKPDMTPREQRRVIMAFQ 246 + V T + +++L + + E + FQ Sbjct: 163 KENSPSGGKEITLTEELRVIFPELSRGCTGTAVKMLQVFLQVQADGIFGTETENALRTFQ 222 >UniRef50_A8RYS3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RYS3_9CLOT Length = 329 Score = 71.1 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 62/162 (38%), Gaps = 36/162 (22%) Query: 21 KGIVEKEGYQLDTRRQAQAAYPRIKVLVIHY------TADDFDSSLATLTD-------KQ 67 VE++ + + + ++ +VIHY TA + +L D Sbjct: 158 PDYVEQDFIRKNIFSRPDVGRQKVDKIVIHYVANPGSTAKNNRDYFDSLADQDPQKSGSS 217 Query: 68 VSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQK 127 SSH++V + + Q +P E+A+ LN+T++ IE+ + Sbjct: 218 ASSHFVVGL-------EGEVIQCIPVNEIAY--------ANAPLNNTTVAIEVCHPDDSG 262 Query: 128 SAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADI 169 F A ++L+ L + + + P +V+ H D+ Sbjct: 263 K--------FNDATYESLVDLTAFLCRQLKLTPGDVIRHYDV 296 >UniRef50_D0YV19 Putative amidase n=1 Tax=Mobiluncus mulieris 28-1 RepID=D0YV19_9ACTO Length = 285 Score = 70.8 bits (172), Expect = 5e-11, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 48/128 (37%), Gaps = 23/128 (17%) Query: 33 TRRQAQAAYPRIKVLVIHYTAD--DFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQL 90 T+ R++ +V+H+ A ++ S+HY V + RI Q Sbjct: 16 TKHYTPGRSVRLRGIVLHHNAAQLSLRGCWDVWQTREASAHYQV-------DANGRIGQY 68 Query: 91 VPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAK 150 V +++ AWHAG + N +IGIE + + S + A + L Sbjct: 69 VHDRDTAWHAGAA--------NPWTIGIEHADATFAPSWTI------SEATLDNGAHLVA 114 Query: 151 DIIARYHI 158 + Y + Sbjct: 115 ALCLAYGL 122 >UniRef50_A6CD01 Probable N-acetylmuramoyl-L-alanine amidase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CD01_9PLAN Length = 221 Score = 70.8 bits (172), Expect = 5e-11, Method: Composition-based stats. Identities = 37/157 (23%), Positives = 57/157 (36%), Gaps = 28/157 (17%) Query: 45 KVLVIHYTADDFDS--SLATLTDKQ----------VSSHYLVPAVPPRYNGKPRIWQLVP 92 + +VIH+TA S S+ L K+ + H+++ +G Sbjct: 55 EYIVIHHTASSTGSVESIHELHSKKKDKSGNSWLGIGYHFVIGNGNGMPDGAIESTFRWR 114 Query: 93 EQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDI 152 EQ HAG + N IGI L P AQ+ A+ L + Sbjct: 115 EQMHGAHAG------NNKYNQHGIGICLVG--------NFENEPPSEAQLAAVKKLVGVL 160 Query: 153 IARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQ 189 A Y+I ++V H D+ PG FP ++A Sbjct: 161 KAEYNINSDHVQGHRDVKAT--ACPGKYFPMSEVASA 195 >UniRef50_C9A1B6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A1B6_ENTGA Length = 316 Score = 70.4 bits (171), Expect = 6e-11, Method: Composition-based stats. Identities = 36/188 (19%), Positives = 67/188 (35%), Gaps = 47/188 (25%) Query: 30 QLDTRRQAQAAYPRIKVLVIHYTAD------DFDSSLATLTDKQVSSHYLVPAVPPRYNG 83 +++ + + RI+ L++HYTA+ + S L S+H V Sbjct: 13 RINKFSRPRIKNFRIEGLIMHYTANNGGTARNHKSYFNNLNGVYASAHLFVDDEEAIC-- 70 Query: 84 KPRIWQLVPEQELAWHA--------GISAWRGAT---RLNDTSIGIELENRGWQKSAGVK 132 ++P E+A+HA G + + N ++IGIE+ + Sbjct: 71 ------IIPLNEVAYHANDIQKYVNGQPYYPLRSIIGNANYSTIGIEMC---------LD 115 Query: 133 YFAPFEPAQIQALIPLAKDIIARYH-IKPENVVAHADIAPQRKDDPGPLFPW-------Q 184 Q + K++IA+Y I + + H D+ K+ P PW + Sbjct: 116 RNGKITEKTFQNTVKAVKELIAKYPNITRDKIWRHYDVTS--KNCPA---PWVAKPSELE 170 Query: 185 QLAQQGIG 192 + G Sbjct: 171 RFKDAVFG 178 >UniRef50_C0F005 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0F005_9FIRM Length = 254 Score = 70.4 bits (171), Expect = 6e-11, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 60/172 (34%), Gaps = 40/172 (23%) Query: 17 CAGEKGIVEKEGYQLDTRRQAQAAY--PRIKVLVIHY------TADDFDSSLATLTDK-- 66 C + + LD +++ ++K +VIHY TA + L + Sbjct: 88 CGRPEITED----FLDKNPYSRSGIALRKVKGVVIHYVENPGSTAKENRDYFNNLQNTHL 143 Query: 67 -QVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGW 125 + SSHY+V + Q +P+ E+++ S N +I IE + Sbjct: 144 TKASSHYIVGL-------DGEVIQCIPQSEISY---ASN-----NRNKDTISIECCHPKK 188 Query: 126 QKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDP 177 F + + L I Y + +NV+ H D+ K P Sbjct: 189 NGK--------FNDKTYNSAVRLTAWICKTYGLSSKNVIRHYDVTG--KMCP 230 >UniRef50_B2J1Q9 N-acetylmuramoyl-L-alanine amidase, family 2 n=4 Tax=Nostocaceae RepID=B2J1Q9_NOSP7 Length = 292 Score = 70.0 bits (170), Expect = 9e-11, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 62/185 (33%), Gaps = 43/185 (23%) Query: 19 GEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLT------DKQVSSHY 72 GE+ + G L+ + ++V+H T S++ Q S H Sbjct: 108 GERYAQDANGVPLNNQP----------IIVLHETGYSASSAINFFQVAHSDEGVQASYHA 157 Query: 73 LVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRL-------------NDTSIGIE 119 L+ + LVP ++ A+ A S + L N+ + + Sbjct: 158 LIKL-------DGTVVYLVPPEKRAFGAANSVFESPQGLETVQTNPKLPASVNNFAYHVS 210 Query: 120 LENR-GWQKSAGVKYFAPFEPAQIQALIPLAKDI-IARYHIKPENVVAHADIAPQRKDDP 177 LE S + + + AQ ++L L + Y I ++V + +K DP Sbjct: 211 LETPPDSYDSNSQQTHSGYTEAQYKSLAWLVAQSQVPDYRITTHHLVDRS----GKKVDP 266 Query: 178 GPLFP 182 F Sbjct: 267 -INFD 270 >UniRef50_Q8KD30 N-acetylmuramoyl-L-alanine amidase, putative n=1 Tax=Chlorobaculum tepidum RepID=Q8KD30_CHLTE Length = 258 Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 35/164 (21%), Positives = 59/164 (35%), Gaps = 41/164 (25%) Query: 48 VIHYTADD---FDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISA 104 V+H+TA ++ T++ YL + I Q P +HAG S+ Sbjct: 84 VVHFTAGRRNGLKPAMKYQTEQG----YL----YFVIDKDGNIGQNFPLDSWGYHAGKSS 135 Query: 105 WRGATR-LNDTSIGIELENRG---------------------------WQKSAGVKYFAP 136 + G ++D +GIE+E G + Y+ Sbjct: 136 YPGLNGTVSDELVGIEIECAGLLTKEGSTYKTWYQTAVAEEEVRYIKTKTDNQQAGYYEK 195 Query: 137 FEPAQIQALIPLAKDIIARYH--IKPENVVAHADIAPQRKDDPG 178 + Q +AL L + + VV H +++P RK+DPG Sbjct: 196 YTQEQEEALTRLLLWLHKNNPDVFSLDFVVGHDEVSPGRKNDPG 239 >UniRef50_Q026T4 N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q026T4_SOLUE Length = 382 Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 28/154 (18%) Query: 70 SHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGAT----RLNDTSIGIELE---N 122 H+L+ + R++++V E + A HAG S W LND+ IG+ E Sbjct: 192 YHFLI-------DRFGRVFRIVNESDAADHAGHSVWADDRYLYVNLNDSFIGVSFEAQTG 244 Query: 123 RGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAP-------QRKD 175 G ++ AQ+++ L + + +RY I N V HA ++ Sbjct: 245 LGGDATSAGG-------AQVRSAAMLTEMLRSRYKIPARNCVTHAQVSVNPSNMQIGYHI 297 Query: 176 DPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAP 209 D FP+++L AWP F A Sbjct: 298 DWASSFPFEKLGLPDNYAWPSPAVSLFGFGFDAT 331 >UniRef50_B4VXL7 Putative peptidoglycan binding domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VXL7_9CYAN Length = 406 Score = 69.2 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 52/275 (18%), Positives = 85/275 (30%), Gaps = 64/275 (23%) Query: 32 DTRRQAQ-AAYPRIKVLVIHYTADDFDS---SLATLTDKQV-----------------SS 70 D R Q A R + ++IH+TA S TLT + S Sbjct: 14 DARPPRQWAGETRPQYIIIHHTATPNPPNDVSRGTLTGAKTFTRSIQTAHVDGFGWIDSG 73 Query: 71 HYLVPAVPPR--YNGKPRIW-----QLVPEQELAWHAGISAWRGATRLNDTSIGIELENR 123 H + + + V HAG + + S GIE E Sbjct: 74 HNFLNTTGGYLLEGRHGSLTAAKQGRSVRSS----HAG-------SNKGNQSPGIENEGT 122 Query: 124 GWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPW 183 Q +L+ L I + I P+N++ H D +P PG W Sbjct: 123 --------FITYQMNAKQWDSLVELCASICSTTKINPDNILGHRDFSPT--QCPG---DW 169 Query: 184 -----QQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKP--DMTPR 236 +L Q+ +F R T + L ++L+ G++ P + Sbjct: 170 LYSQLPRLRQEVRQR----LGASFIEVLREGDTGLRVKELQQILSAQGFNPGPIDGIFGA 225 Query: 237 EQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLE 271 ++ FQ F +G T + E + + Sbjct: 226 GTEDAVVLFQ-KFYGLEPDGLVGPNTWKVLERVSQ 259 >UniRef50_C6R9G6 Negative regulator of beta-lactamase expression n=3 Tax=Corynebacterium RepID=C6R9G6_9CORY Length = 101 Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 37/101 (36%), Gaps = 15/101 (14%) Query: 31 LDTRRQAQAAYPRIKVLVIHYTAD--DFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIW 88 ++ +IK +V H+ A D ++ S+HY V RI Sbjct: 14 INKHYTPGRGGQQIKYIVRHHNAGVLTIDGCWQVWQTREASAHYQVENS-------GRIG 66 Query: 89 QLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSA 129 QLV + + AWHA N SIGIE N G Sbjct: 67 QLVNDSDTAWHAA------NQLRNQQSIGIEHANCGGADQD 101 >UniRef50_B5CSL4 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=B5CSL4_9FIRM Length = 258 Score = 68.4 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 66/185 (35%), Gaps = 47/185 (25%) Query: 24 VEKEGYQLDTRRQAQAAYPR-------IKVLVIHYTAD---------DFDSSLATLTDKQ 67 V+ +D + Y R I +VIHYTA+ D+ + L + + Sbjct: 91 VDASEPVIDVQLLDVNPYSRPGTTIDEIHGIVIHYTANPGSTAQENRDYFNGLKDSHETE 150 Query: 68 VSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQK 127 SS+++V + I Q VP E+A+ S N ++ IE Sbjct: 151 ASSNFVVGL-------EGEIIQCVPTWEMAY---ASN-----ERNADTVSIE-------- 187 Query: 128 SAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLF-----P 182 F Q+++ L + +Y++ + V+ H D+ K P F Sbjct: 188 CCHPDETGKFTKETYQSMVQLTAWLCKKYNLNEDQVIRHYDVTG--KICP-KYFVEDEAA 244 Query: 183 WQQLA 187 W+Q Sbjct: 245 WKQFK 249 >UniRef50_C4V1H2 Putative uncharacterized protein n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1H2_9FIRM Length = 219 Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 39/161 (24%), Positives = 58/161 (36%), Gaps = 46/161 (28%) Query: 44 IKVLVIHYTADD--------FDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQE 95 + +V+H+TA D F ++ A ++H+LV + I++L+PE Sbjct: 64 PQAVVVHWTAGDTWESAYWHFYAAAAQDGTMNYAAHFLV-------DRDGTIFRLLPETA 116 Query: 96 LAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIAR 155 +A H N SIGIE GV Q+ A L + + A+ Sbjct: 117 MARH--------IIGYNWCSIGIENVG-------GVGGVEDLTEEQLAANAALIRYLHAK 161 Query: 156 YHIKPENVVAHAD-------------IAPQR--KDDPGPLF 181 Y V H +A R K DPGP F Sbjct: 162 YP-TIAYVFGHYQQDTARDSGLYIEHVAGYRSIKSDPGPQF 201 >UniRef50_B9YE42 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YE42_9FIRM Length = 244 Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 33/154 (21%) Query: 35 RQAQAAYPR-IKVLVIHYTADDFDSSLATLTDKQV--------SSHYLVPAVPPRYNGKP 85 Q + R I+ +VIH T ++ S+ A ++ + S HY V Sbjct: 93 HQNRPGIQREIRWIVIHETDNEAASADAWHHNEYLKTNETDINSWHYTVDDHA------- 145 Query: 86 RIWQLVPEQELAWHAGISAWRGATRLNDTSIGIEL-ENRGWQKSAGVKYFAPFEPAQIQA 144 I+ +P++E+ WHAG N T IGIEL N G ++ Sbjct: 146 -IYHSLPDEEVGWHAGDKM--TENGGNMTGIGIELCVNEGNDF-----------EKTMEN 191 Query: 145 LIPLAKDIIARYHIKPENVVAHADIAPQRKDDPG 178 L +++ Y ++ E++ H D + KD P Sbjct: 192 AAALCAELMKAYDLRIEDIKQHHDFSG--KDCPH 223 >UniRef50_B0CCH2 N-acetylmuramoyl-L-alanine amidase, putative n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0CCH2_ACAM1 Length = 236 Score = 68.1 bits (165), Expect = 3e-10, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 57/178 (32%), Gaps = 37/178 (20%) Query: 24 VEKEGYQLDTRRQAQAAYPRIK---VLVIHYTADDFDSSLATLTDK------QVSSHYLV 74 R + ++V+H T S++ Q S H L+ Sbjct: 30 RPAHETNFGKRYPKDIYGRPVNNEPIVVLHETVSSGASTIRFFQTPHYNEAEQASYHDLI 89 Query: 75 PAVPPRYNGKPRIWQLVPEQELAWHAGISAWRG-------------ATRLNDTSIGIELE 121 I +V + A+ AG S + G + +N+ + I LE Sbjct: 90 I-------RNGTIVHIVSRENRAFGAGNSVFNGPNGPESVKTHKIYSASVNNFAYHISLE 142 Query: 122 NRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHA--DIAPQRKDDP 177 + G ++ + AQ ++L ++A I V H D + R+ DP Sbjct: 143 TPPDGRHNGNRHSG-YTQAQYKSLA----YLVANSQIPLSRVTTHKGVDRSGSRR-DP 194 >UniRef50_A3HZ10 Putative uncharacterized protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3HZ10_9SPHI Length = 223 Score = 68.1 bits (165), Expect = 3e-10, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 64/176 (36%), Gaps = 57/176 (32%) Query: 44 IKVLVIHYTA-DDFDSSLATL--------------TDKQVSSHYLVPAVPPRYNGKPRIW 88 K++V+H+TA + +++ + VSS +L+ + I+ Sbjct: 63 PKIVVVHWTAINSVEATFDVFDSPTLGGREDLRNASGLNVSSQFLI-------DRDGTIF 115 Query: 89 QLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPL 148 +L+PE A H LN T+IGIE P Q++A L Sbjct: 116 RLLPETTFARH--------TIGLNYTAIGIENVGSPDD---------PLTKEQLKANEML 158 Query: 149 AKDIIARYHIKPENVVAHADI-------------APQR--KDDPGPLFPWQQLAQQ 189 + + +Y I + V+ H + R K DPG F ++L + Sbjct: 159 IRHLRKKYPI--DYVIGHHEYQNFQETDFWKEADPNYRTVKTDPGDAF-MEKLRKN 211 >UniRef50_Q31MV4 N-acetylmuramoyl-L-alanine amidase, family 2 n=3 Tax=Synechococcus elongatus RepID=Q31MV4_SYNE7 Length = 261 Score = 67.7 bits (164), Expect = 4e-10, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 59/164 (35%), Gaps = 33/164 (20%) Query: 46 VLVIHYTADDFDSSLATLT------DKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWH 99 ++V+H T DS++ + S H ++ + +VP Q A+ Sbjct: 97 LIVLHETVYSADSAIDWFRRGDLEDSEAASYHAIIR-------RNGAVISIVPAQAKAYG 149 Query: 100 AGISAWRGATRL-------------NDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALI 146 A S + A L N S I LE + + + + AQ ++L Sbjct: 150 AAESGFDTAEGLETLYGDPEQPPSVNSFSYHISLETPLDGQDSDPTHSG-YTVAQYRSLA 208 Query: 147 PLAKDIIARYHIKPENVVAHADIAP-QRKDDPGPLFPWQQLAQQ 189 L IA+ + E + H ++ + DP F +L +Q Sbjct: 209 WL----IAQTEVPAERITTHKEVDLSGERIDP-RSFDRDRLLKQ 247 >UniRef50_A7G716 N-acetylmuramoyl-L-alanine amidase n=7 Tax=Clostridium RepID=A7G716_CLOBH Length = 236 Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 36/256 (14%), Positives = 79/256 (30%), Gaps = 50/256 (19%) Query: 32 DTRRQAQAAYPRIKVLVIHYTADDFDSSLA----TLTDKQVS---SHYLVPAVPPRYNGK 84 + + + + K++++H+ A+ S+ + S +Y + Sbjct: 7 NLKFRGLSYGNNPKMIILHH-AEASGCSIKDIHLWHLNNGWSGCGYNYFIKK-------D 58 Query: 85 PRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQA 144 I++ P+ + H N SIGI +E R + G Q + Sbjct: 59 GAIYKGRPDNAIGAHC--------LSYNGVSIGICMEGRFNVEEMGAD--------QYNS 102 Query: 145 LIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYL 204 L L + +Y+I + H ++ + PG FP ++ ++ +G + + Sbjct: 103 LKDLTCYLQNKYNINK--IYGHREL--NETECPGNNFPLHRIKKECLGGNNSIENSSNNK 158 Query: 205 AGRAPHT----------PVDTASLLELLARYGYDVKPDMTP----REQRRVIMAFQMHFR 250 ++ + + L GY V + FQ Sbjct: 159 GSKSYPGYLLKYNPGRFDANVKLIQSKLQNIGYSVGKYGVDGYFGDGTLLAVKCFQRD-C 217 Query: 251 PTLYNGEADAETQAIA 266 + +G +T Sbjct: 218 NLMIDGIIGVDTWKRI 233 >UniRef50_Q5L2J6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Geobacillus kaustophilus RepID=Q5L2J6_GEOKA Length = 226 Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 65/165 (39%), Gaps = 33/165 (20%) Query: 30 QLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLT---------DKQVSSHYLVPAVPPR 80 +++ + +K LV+H+TA+ S+ T + S+H V Sbjct: 10 RVNKYSRPGLKLKGVKKLVLHWTANPGASAANHFTYFDRTIIQAQRYASAHIFVD----- 64 Query: 81 YNGKPRIWQLVPEQELAWHAGISAWRGATRL----NDTSIGIELENRGWQKSAGVKYFAP 136 K ++P E+A+HA +RG L N SIG+E+ V+ Sbjct: 65 ---KNEAINIIPLDEVAYHANDGTYRGVPELKPNANFLSIGVEMC---------VEKDGT 112 Query: 137 FEPAQIQALIPLAKDIIARYHIKP-ENVVAHADIAPQRKDDPGPL 180 F P I + ++ + + P +++V H DI K+ P P Sbjct: 113 FHPDTISRTEDVFVELCKTFKLDPIKDIVRHYDI--THKNCPAPW 155 >UniRef50_C1A451 Putative amidase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A451_GEMAT Length = 164 Score = 66.1 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 60/160 (37%), Gaps = 24/160 (15%) Query: 32 DTRRQAQAAYPRIKVLVIHYTADDFDSSLAT--LTDKQVSSHYLVPAVPPRYNGKPRIWQ 89 A++ R++ L +H+T + S+L + QVS H ++ + Sbjct: 7 SPNHSARSH--RVEALCVHWTGGSYASALDWTRRKESQVSYHAIIAP-------DGEVAL 57 Query: 90 LVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPF--EPAQIQALIP 147 VP +W G S R S G G ++ + P PAQ+Q L+ Sbjct: 58 CVPWDRASWSVGASRQPDDLRFTFGSKG-----NGATENIALAGGPPTKPTPAQVQVLVR 112 Query: 148 LAKDIIARYHIKPE---NVVAHADIA--PQRKDDP-GPLF 181 L + + + +V H D+A RK DP G + Sbjct: 113 LLRARMIAHQWPLTETWRIVGHVDLAMPRGRKTDPTGGAW 152 >UniRef50_C5PKQ4 Putative uncharacterized protein n=2 Tax=Sphingobacterium spiritivorum RepID=C5PKQ4_9SPHI Length = 237 Score = 66.1 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 39/175 (22%), Positives = 66/175 (37%), Gaps = 57/175 (32%) Query: 43 RIKVLVIHYTAD-DFDSSLATL--------------TDKQVSSHYLVPAVPPRYNGKPRI 87 + +++V+H+TA+ S+ + VSS Y++ + I Sbjct: 77 KPQIVVVHWTANNSVKSTFNAFNPVQLPGRPELTKASKLNVSSQYVI-------DRDGTI 129 Query: 88 WQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIP 147 +Q +P+ A H LN +IGIE N G +K+ P AQ++A Sbjct: 130 YQFLPDTVFARH--------TIGLNYCAIGIE--NIGSEKN-------PLTDAQLKANTQ 172 Query: 148 LAKDIIARYHIKPENVVAHADI------------APQR---KDDPGPLFPWQQLA 187 L + +Y I+ V+ H + P K DPG F ++L Sbjct: 173 LIDLLSEKYPIEL--VIGHLEYKQFKKTKWWKETDPNYITGKSDPGLDF-MKRLR 224 >UniRef50_C1ZE81 Negative regulator of beta-lactamase expression n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZE81_PLALI Length = 344 Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 48/193 (24%), Positives = 71/193 (36%), Gaps = 47/193 (24%) Query: 45 KVLVIHYTADDFDS--SL--ATLTDKQVS--------SHYLVPAVPPRYNGKPRIWQLVP 92 K LV+H+TA S+ + L +K S H+++ NG P Sbjct: 168 KYLVLHHTATTSGDVESIHQSHLKNKDRSGNRWLGIGYHFVIG------NGDGM-----P 216 Query: 93 EQELA----WHA---GISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQAL 145 + E+A WH G A G ND IGI L +K P AQ+ A Sbjct: 217 DGEIAPTFRWHQQLPGAHA--GNKEFNDCGIGIVLVGNFAKK--------PPTEAQVSAT 266 Query: 146 IPLAKDIIARYHIKPENVVAHADIAPQRKD-DPGPLFPWQQLAQ-QGIGA--WPDAQRVN 201 L D+ + I+ ++ H + R PG FP + + GIG PDA+ + Sbjct: 267 KRLVSDLANEFVIESSCIIGHGTV---RATECPGRYFPMDVVKKGLGIGHEGQPDAEPPH 323 Query: 202 FYLAGRAPHTPVD 214 G+ Sbjct: 324 ATPPGKTAAATPR 336 >UniRef50_B0G3S2 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=B0G3S2_9FIRM Length = 254 Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 64/171 (37%), Gaps = 40/171 (23%) Query: 32 DTRRQAQAAYPRIKVLVIHYTAD---------DFDSSLATLTDKQVSSHYLVPAVPPRYN 82 + ++Q +I +VIHYTA+ ++ L + + SS+++V Sbjct: 97 NPYSRSQEKTDKITGIVIHYTANPGATAIGNRNYFEGLKDSHETKASSNFVVGLN----- 151 Query: 83 GKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQI 142 I Q +P E+A+ S N ++ IE F A Sbjct: 152 --GEIVQCIPTWEVAY---ASN-----DRNYDTVSIE--------CCHPDATGKFNDATY 193 Query: 143 QALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLF-----PWQQLAQ 188 ++++ L + ++++ E+V+ H D+ K P F W Q + Sbjct: 194 RSMVQLTAWLCLKFNLTEEDVIRHYDVTG--KICP-KYFVENEGAWDQFRK 241 >UniRef50_D2RJL3 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RJL3_ACIFE Length = 242 Score = 65.4 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 45/198 (22%), Positives = 67/198 (33%), Gaps = 60/198 (30%) Query: 21 KGIVEKEGYQLDTRRQAQAAYPRIKV-----------LVIHYTADDFDSSLAT------- 62 + + D RR+ Y RI +V+H+TA D + Sbjct: 52 PAMESRPIAFTDRRRRLIREYARIHYGREMETIVPQAVVVHWTASDSRDGVYRYFYNEEN 111 Query: 63 --LTDK--QVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGI 118 L + V+SH+LV + IWQL PE T LN +IG+ Sbjct: 112 PHLRNGTLNVASHFLV-------DRDGTIWQLTPE---------------TALNRHAIGL 149 Query: 119 ELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQR----- 173 G + GV AQ++A + L + + +Y + V+ H R Sbjct: 150 NWCAIGIENVGGVDGREDLTRAQLEANVNLIRYLRGKYP-TIQWVLGHYQQDQARHTSLW 208 Query: 174 ----------KDDPGPLF 181 K DPGP F Sbjct: 209 KENVPGYYHGKTDPGPRF 226 >UniRef50_B4AHH5 N-acetylmuramoyl-L-alanine amidase XlyB (Cellwall hydrolase) (Autolysin) n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AHH5_BACPU Length = 267 Score = 65.4 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 44/196 (22%), Positives = 64/196 (32%), Gaps = 45/196 (22%) Query: 34 RRQAQAAYPRIKVLVIHYTADDFDSS-------LATLTDKQVSSHYLVPAVPPRYNGKPR 86 R + + +H T++ + + VS HY V Sbjct: 13 NRNRPGNTMKPLYITVHNTSNTAKGANAGSHAAFVARSSTGVSWHYTVD--------DQV 64 Query: 87 IWQLVPEQELAWHAGISAWRGATRLNDTSIGIEL-ENRGWQKSAGVKYFAPFEPAQIQAL 145 I+Q +P E WH G G N SIGIE+ EN V E AQ Sbjct: 65 IYQHLPLNENGWHTG----DGRGNGNMKSIGIEICENTDGNFEQAV------ENAQ---- 110 Query: 146 IPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAW--PDAQRVNFY 203 L + ++ I NVV H + K+ P ++ +G W A Sbjct: 111 -WLIRKLMGDLGIPLSNVVPHKHWSG--KECP----------RKLLGRWDQFKAGIATAR 157 Query: 204 LAGRAPHTPVDTASLL 219 ++ PV T SL Sbjct: 158 TGSKSTRKPVRTESLS 173 >UniRef50_Q609E7 N-acetylmuramoyl-L-alanine amidase domain/peptidoglycan binding domain protein n=1 Tax=Methylococcus capsulatus RepID=Q609E7_METCA Length = 617 Score = 65.4 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 38/153 (24%), Positives = 59/153 (38%), Gaps = 28/153 (18%) Query: 47 LVIH-YTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGI--- 102 +VIH Y + + ++ S HYL+ A RI Q V E + A+HAG+ Sbjct: 25 VVIHAYPSLETAETVFANPRSSESCHYLIAA-------GGRIRQYVDETDTAYHAGLVIN 77 Query: 103 ---SAWRGATRLNDTSIGI-ELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHI 158 +R N +IG+ G S A L +I A + Sbjct: 78 PSWGLYRRGINPNLMTIGVAAAVGPGEHWSG----------EMYDAAAELIGEIAAYWGF 127 Query: 159 KPE--NVVAHADIAPQRKDDPGPLFPWQQLAQQ 189 P+ ++V HA+I R D G F +L ++ Sbjct: 128 PPDAEHIVLHAEIRASR-DCTGRGFERAELLKR 159 >UniRef50_UPI0001BCD943 Peptidoglycan-binding domain 1 protein n=2 Tax=Aeromicrobium marinum DSM 15272 RepID=UPI0001BCD943 Length = 288 Score = 65.0 bits (157), Expect = 2e-09, Method: Composition-based stats. Identities = 46/224 (20%), Positives = 73/224 (32%), Gaps = 39/224 (17%) Query: 34 RRQAQAAYPRIKVLVIHYTADDFDS--SLATLTDKQ-------VSS-HYLVPAV--PPRY 81 + + + + + H+TAD S A LT ++ +S+ H +P Sbjct: 23 KHEGRPGTFSPRGVAAHHTADTLSDHYSGAELTRREEDYARIGLSTGHRELPGPLCQIGL 82 Query: 82 NGKPRIWQLVPEQELAWHAG-ISAWRG---ATRLNDTSIGIELENRGWQKSAGVKYFAPF 137 ++ V A HAG + +W G A N +IGIE N ++ + Sbjct: 83 GRDGTVY--VIAAGRANHAGKVRSWGGWVSAGDGNTQAIGIEAMNSAYEG---------W 131 Query: 138 EPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDP---GPLFPWQQLAQQGIGAW 194 Q +A L + Y V AH +I+ K DP G L G Sbjct: 132 SDTQSRAYHRLCAALCDHYGWPRSRVAAHGEISTSGKWDPGVNGRLIDMNAFRAAVAGV- 190 Query: 195 PDAQRVNFYLAGRAPHTPVDTASLLELLAR-YGYDVKPDMTPRE 237 +T LAR YD++P + Sbjct: 191 -------TQGDDDMQNTEEQYEIFRHFLARALRYDIRPLGAGAD 227 >UniRef50_A3DIC1 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium thermocellum ATCC 27405 RepID=A3DIC1_CLOTH Length = 218 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 66/215 (30%), Gaps = 46/215 (21%) Query: 29 YQLDTRRQAQAAYPRI------KVLVIHYTADDFDSSL---ATLTDKQ----VSSHYLVP 75 Y +D + R + + IH T + ++ A LT+ S H +V Sbjct: 4 YIVDHIPKTTPYNRRPGYSMTPEYITIHSTGNPTSTARNERAWLTNPNNNVTASWHIVVD 63 Query: 76 AVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFA 135 +P E+AWHAG G N SIGIE+ G ++ Sbjct: 64 EKEAIEA--------IPLNEVAWHAGDG---GNGTGNRKSIGIEICESGDRQKT------ 106 Query: 136 PFEPAQIQALIPLAKDIIARYHIKPENVVAHAD----IAPQRKDDPGPLFPWQQLAQQG- 190 +Q L ++ + + H D I P+ D G W+Q + Sbjct: 107 ------LQNAAELVAKLLKERGWGVDKLRRHYDWSGKICPRIFHDNGKWTGWKQFKEAVQ 160 Query: 191 ---IGAWPDAQRVNFYLAGRAPHTPVDTASLLELL 222 G D + + A LL Sbjct: 161 KELFGG--DNMTQDKNQPSDWAKEAWEWAKQQGLL 193 >UniRef50_A5Z605 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z605_9FIRM Length = 212 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 68/179 (37%), Gaps = 36/179 (20%) Query: 20 EKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSS-----LATLTDKQVSSHYLV 74 ++ E ++D ++ +K +V+HY + ++ VSSH++V Sbjct: 50 MPDWIKSEIIEVDGTSRSGEKLSSVKDIVVHYVGNPGSTAEQNRNFYAGDQSNVSSHFVV 109 Query: 75 PAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYF 134 K I Q +P E++ S WR N+ +I IE+ + Sbjct: 110 GL-------KGEIIQCIPLSEMS---AASNWR-----NNDTISIEVCHPDDTGK------ 148 Query: 135 APFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLF-----PWQQLAQ 188 F ++L+ L + + ++ +V+ H DI K+ P F W++ Q Sbjct: 149 --FNKKTYKSLVKLVAWLEEQCGLEDGDVIRHYDITG--KECP-RYFVTHEDAWKKFKQ 202 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P75820 N-acetylmuramoyl-L-alanine amidase amiD n=119 Ta... 334 2e-90 UniRef50_C5BFW7 N-acetylmuramoyl-L-alanine amidase AmiD n=14 Tax... 304 2e-81 UniRef50_D1P770 N-acetylmuramoyl-L-alanine amidase, family 2 n=3... 300 3e-80 UniRef50_A1V4B3 N-acetylmuramoyl-L-alanine amidase domain protei... 300 4e-80 UniRef50_A7FHD3 N-acetylmuramoyl-L-alanine amidase, family 2 n=2... 296 5e-79 UniRef50_Q1QX12 Negative regulator of AmpC, AmpD n=1 Tax=Chromoh... 281 2e-74 UniRef50_A9KGI9 Anhydro-N-acetylmuramyl-tripeptide amidase n=16 ... 280 3e-74 UniRef50_C9MVU9 N-acetylmuramoyl-L-alanine amidase domain protei... 280 3e-74 UniRef50_A6UZQ6 N-acetylmuramoyl-L-alanine amidase AmiD n=53 Tax... 273 4e-72 UniRef50_C7NA60 N-acetylmuramyl-L-alanine amidase, negative regu... 272 8e-72 UniRef50_A5WCW3 N-acetylmuramoyl-L-alanine amidase, family 2 n=5... 272 1e-71 UniRef50_C0YHQ4 Possible N-acetylmuramoyl-L-alanine amidase n=1 ... 266 4e-70 UniRef50_Q4ZZT4 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 266 7e-70 UniRef50_C0QVR5 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Brach... 263 5e-69 UniRef50_Q3JK19 N-acetylmuramoyl-L-alanine amidase domain protei... 263 6e-69 UniRef50_A4VRS8 N-acetylmuramoyl-L-alanine amidase family protei... 259 6e-68 UniRef50_C7XRK8 Glutaminase n=10 Tax=Fusobacterium RepID=C7XRK8_... 259 8e-68 UniRef50_C1QGN2 Negative regulator of beta-lactamase expression ... 258 2e-67 UniRef50_C6X3P6 N-acetylmuramoyl-L-alanine amidase n=3 Tax=Bacte... 255 1e-66 UniRef50_A9M6A2 Protein ampD n=39 Tax=Proteobacteria RepID=A9M6A... 251 2e-65 UniRef50_A1UW52 N-acetylmuramoyl-L-alanine amidase domain protei... 250 4e-65 UniRef50_A4CAP2 Probable N-acetylmuramoyl-L-alanine amidase n=1 ... 247 2e-64 UniRef50_Q15N79 N-acetylmuramyl-L-alanine amidase, negative regu... 244 2e-63 UniRef50_A4SRC8 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Aerom... 244 3e-63 UniRef50_Q07PU2 N-acetylmuramyl-L-alanine amidase, negative regu... 236 5e-61 UniRef50_B0T844 N-acetylmuramyl-L-alanine amidase, negative regu... 235 1e-60 UniRef50_B2IHS0 N-acetylmuramyl-L-alanine amidase, negative regu... 233 5e-60 UniRef50_B6JBX5 Negative regulator of AmpC, AmpD n=3 Tax=Alphapr... 232 7e-60 UniRef50_Q2RVT4 AmpD (Negative regulator of AmpC) n=2 Tax=Rhodos... 224 2e-57 UniRef50_C6QHF6 N-acetylmuramyl-L-alanine amidase, negative regu... 224 3e-57 UniRef50_UPI00016A62BF N-acetylmuramyl-L-alanine amidase, negati... 222 8e-57 UniRef50_B3ESH1 Putative uncharacterized protein n=1 Tax=Candida... 219 6e-56 UniRef50_Q4FPN2 Probable N-acetylmuramoyl-L-alanine amidase n=2 ... 218 2e-55 UniRef50_C4SAC3 Negative regulator of beta-lactamase expression ... 217 2e-55 UniRef50_Q0BV14 Anhydro-N-acetylmuramyl-tripeptide amidase n=1 T... 217 2e-55 UniRef50_C6XME2 N-acetylmuramyl-L-alanine amidase, negative regu... 214 3e-54 UniRef50_A3HXI6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Algor... 214 3e-54 UniRef50_B6BSD7 Probable N-acetylmuramoyl-L-alanine amidase YbjR... 212 8e-54 UniRef50_A5V2C7 N-acetylmuramoyl-L-alanine amidase, family 2 n=6... 211 2e-53 UniRef50_B6IRH2 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Rhodo... 211 2e-53 UniRef50_A8TR24 Negative regulator of beta-lactamase expression ... 206 8e-52 UniRef50_C6XXC7 N-acetylmuramoyl-L-alanine amidase family 2 n=3 ... 204 2e-51 UniRef50_A5FA27 N-acetylmuramoyl-L-alanine amidase, family 2 n=2... 202 8e-51 UniRef50_A5CBZ0 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Orien... 197 3e-49 UniRef50_Q28T26 Negative regulator of AmpC AmpD n=39 Tax=Rhodoba... 194 3e-48 UniRef50_C7D9N0 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=... 190 4e-47 UniRef50_C7PRR2 N-acetylmuramyl-L-alanine amidase, negative regu... 189 8e-47 UniRef50_C2G1S0 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Sphin... 183 5e-45 UniRef50_D0CW21 N-acetylmuramyl-L-alanine amidase, negative regu... 182 9e-45 UniRef50_D1WWE1 N-acetylmuramyl-L-alanine amidase, negative regu... 181 3e-44 UniRef50_Q3BNF4 N-acetylmuramoyl-L-alanine amidase n=14 Tax=Xant... 180 4e-44 UniRef50_Q0F4W8 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 177 4e-43 UniRef50_B9NMR2 N-acetylmuramyl-L-alanine amidase, negative regu... 174 3e-42 UniRef50_Q1DDM5 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 169 9e-41 UniRef50_UPI0001793312 PREDICTED: hypothetical protein n=1 Tax=A... 168 2e-40 UniRef50_A3VV46 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Parvu... 167 4e-40 UniRef50_Q2NVA7 Putative N-acetylmuramoyl-L-alanine amidase n=1 ... 167 5e-40 UniRef50_Q093H8 Negative regulator of beta-lactamase expression ... 163 5e-39 UniRef50_D2AU78 N-acetylmuramoyl-L-alanine amidase n=5 Tax=Bacte... 156 7e-37 UniRef50_Q4ZY97 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 155 1e-36 UniRef50_A8PNB6 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=... 155 2e-36 UniRef50_B8GD95 N-acetylmuramyl-L-alanine amidase, negative regu... 153 7e-36 UniRef50_A5UR54 N-acetylmuramoyl-L-alanine amidase, family 2 n=2... 153 7e-36 UniRef50_A4W6L1 N-acetylmuramoyl-L-alanine amidase, family 2 n=3... 153 8e-36 UniRef50_D1SAT8 N-acetylmuramyl-L-alanine amidase, negative regu... 151 2e-35 UniRef50_B3SF77 Putative uncharacterized protein (Fragment) n=1 ... 151 3e-35 UniRef50_A4TAY9 Peptidoglycan-binding domain 1 protein n=5 Tax=r... 150 5e-35 UniRef50_B4RX52 N-acetylmuramoyl-L-alanine amidase, putative n=2... 150 5e-35 UniRef50_Q46X31 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 149 1e-34 UniRef50_D2AQX4 Negative regulator of beta-lactamase expression-... 148 2e-34 UniRef50_C7RNH8 N-acetylmuramyl-L-alanine amidase, negative regu... 148 2e-34 UniRef50_C8PWQ1 Protein AmpD n=1 Tax=Enhydrobacter aerosaccus SK... 147 3e-34 UniRef50_D2BEW5 Negative regulator of beta-lactamase expression-... 147 3e-34 UniRef50_Q12NJ5 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 147 5e-34 UniRef50_A5WCS6 N-acetylmuramoyl-L-alanine amidase, family 2 n=3... 146 7e-34 UniRef50_B5JVS6 Negative regulator of AmpC, AmpD n=1 Tax=gamma p... 146 7e-34 UniRef50_Q1ARF9 N-acetylmuramyl-L-alanine amidase, negative regu... 146 9e-34 UniRef50_B8GT21 N-acetylmuramyl-L-alanine amidase, negative regu... 146 9e-34 UniRef50_P13016 1,6-anhydro-N-acetylmuramyl-L-alanine amidase am... 145 1e-33 UniRef50_C6APP4 Protein AmpD n=8 Tax=Gammaproteobacteria RepID=C... 145 2e-33 UniRef50_P82974 1,6-anhydro-N-acetylmuramyl-L-alanine amidase am... 145 2e-33 UniRef50_A1K6E1 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Azoar... 144 3e-33 UniRef50_C9R6I7 Protein AmpD n=1 Tax=Aggregatibacter actinomycet... 144 3e-33 UniRef50_Q0AC58 N-acetylmuramyl-L-alanine amidase, negative regu... 144 4e-33 UniRef50_A4G8Q1 N-acetylmuramoyl-L-alanine amidase n=4 Tax=Burkh... 143 5e-33 UniRef50_Q65VN8 AmpD protein n=13 Tax=Gammaproteobacteria RepID=... 143 5e-33 UniRef50_UPI0000D5333F negative regulator of AmpC, AmpD n=1 Tax=... 143 7e-33 UniRef50_C9N2Y5 N-acetylmuramyl-L-alanine amidase, negative regu... 143 7e-33 UniRef50_A8FQB8 N-acetylmuramyl-L-alanine amidase, negative regu... 142 1e-32 UniRef50_C5TMG7 Protein AmpD n=4 Tax=Neisseriaceae RepID=C5TMG7_... 142 1e-32 UniRef50_B0VMP8 N-acetyl-anhydromuramyl-L-alanine amidase (Regul... 141 2e-32 UniRef50_C0R4G3 N-acetylmuramoyl-L-alanine amidase, family 2 n=9... 140 4e-32 UniRef50_B3QXY2 N-acetylmuramyl-L-alanine amidase, negative regu... 140 4e-32 UniRef50_C4DNA4 Negative regulator of beta-lactamase expression ... 140 5e-32 UniRef50_A4A5I4 Anhydro-N-acetylmuramyl-tripeptide amidase n=1 T... 140 6e-32 UniRef50_A1TKH5 N-acetylmuramyl-L-alanine amidase, negative regu... 139 8e-32 UniRef50_A9AXU4 N-acetylmuramyl-L-alanine amidase, negative regu... 139 9e-32 UniRef50_B2JH28 N-acetylmuramyl-L-alanine amidase, negative regu... 139 1e-31 UniRef50_Q8ES14 Putative uncharacterized protein OB0830 n=1 Tax=... 138 2e-31 UniRef50_D2PZI0 N-acetylmuramyl-L-alanine amidase, negative regu... 138 2e-31 UniRef50_B1XX10 N-acetylmuramyl-L-alanine amidase, negative regu... 137 4e-31 UniRef50_C9LCL1 N-acetylmuramoyl-L-alanine amidase CwlL n=2 Tax=... 137 5e-31 UniRef50_D1CGY2 N-acetylmuramyl-L-alanine amidase, negative regu... 137 5e-31 UniRef50_A4SVB0 N-acetylmuramoyl-L-alanine amidase, family 2 n=4... 136 9e-31 UniRef50_D1XLT9 N-acetylmuramyl-L-alanine amidase, negative regu... 135 1e-30 UniRef50_D0LQ75 N-acetylmuramyl-L-alanine amidase, negative regu... 135 2e-30 UniRef50_B5HCN0 Secreted protein n=3 Tax=Streptomyces RepID=B5HC... 135 2e-30 UniRef50_B5GAH2 Amidase n=15 Tax=Streptomyces RepID=B5GAH2_9ACTO 134 4e-30 UniRef50_B3R6P0 N-acetyl-anhydromuranmyl-L-alanine amidase n=3 T... 133 5e-30 UniRef50_D0J795 N-acetylmuramyl-L-alanine amidase, negative n=9 ... 133 6e-30 UniRef50_A0L5K2 N-acetylmuramyl-L-alanine amidase, negative regu... 132 9e-30 UniRef50_A1AXT9 N-acetylmuramyl-L-alanine amidase, negative regu... 132 1e-29 UniRef50_UPI0001B539A2 amidase n=1 Tax=Streptomyces sp. AA4 RepI... 132 1e-29 UniRef50_D2Q0D6 N-acetylmuramyl-L-alanine amidase, negative regu... 132 2e-29 UniRef50_D1X7T3 N-acetylmuramyl-L-alanine amidase, negative regu... 131 2e-29 UniRef50_A8FVJ2 Negative regulator of beta-lactamase expression-... 131 3e-29 UniRef50_D0RN01 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=... 130 5e-29 UniRef50_A6GR52 Putative anhydro-N-acetylmuramyl-tripeptide amid... 130 7e-29 UniRef50_C0WQZ5 N-acetylmuramyl-L-alanine amidase, negative regu... 128 2e-28 UniRef50_C4KDJ8 Peptidoglycan-binding domain 1 protein n=1 Tax=T... 128 2e-28 UniRef50_A1UKT0 Peptidoglycan-binding domain 1 protein n=3 Tax=M... 128 2e-28 UniRef50_A6GDD4 Putative N-acetylmuramoyl-L-alanine amidase n=1 ... 127 5e-28 UniRef50_B9XDJ7 N-acetylmuramoyl-L-alanine amidase family 2 n=1 ... 125 1e-27 UniRef50_Q92IC3 Putative N-acetylmuramoyl-L-alanine amidase RC04... 125 2e-27 UniRef50_Q331X1 Putative N-acetylmuramoyl-L-alanine amidase n=2 ... 124 4e-27 UniRef50_B3ZYJ5 N-acetylmuramoyl-L-alanine amidase, putative n=1... 123 5e-27 UniRef50_Q9FC03 Putative secreted amidase n=2 Tax=Streptomyces R... 123 6e-27 UniRef50_A7G716 N-acetylmuramoyl-L-alanine amidase n=7 Tax=Clost... 123 7e-27 UniRef50_P54450 N-acetylmuramoyl-L-alanine amidase cwlH n=1 Tax=... 123 8e-27 UniRef50_B4AHH5 N-acetylmuramoyl-L-alanine amidase XlyB (Cellwal... 122 1e-26 UniRef50_A6T2C3 Negative regulator of beta-lactamase expression ... 122 1e-26 UniRef50_A4WS28 N-acetylmuramoyl-L-alanine amidase, family 2 n=2... 122 2e-26 UniRef50_B4VXL7 Putative peptidoglycan binding domain protein n=... 121 3e-26 UniRef50_Q5WIB6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Bacil... 120 4e-26 UniRef50_Q1QZ97 Negative regulator of AmpC, AmpD n=1 Tax=Chromoh... 120 5e-26 UniRef50_A6GHP2 Putative amidase n=1 Tax=Plesiocystis pacifica S... 119 8e-26 UniRef50_B8FYR6 N-acetylmuramyl-L-alanine amidase, negative regu... 119 1e-25 UniRef50_UPI00016C05EA N-acetylmuramoyl-L-alanine amidase n=1 Ta... 119 1e-25 UniRef50_P36550 N-acetylmuramoyl-L-alanine amidase cwlL n=4 Tax=... 119 1e-25 UniRef50_A5GTP3 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Synec... 118 2e-25 UniRef50_D2AX66 Negative regulator of beta-lactamase expression-... 118 2e-25 UniRef50_A0Q0S8 N-acetylmuramoyl-L-alanine amidase cwlL (Cellwal... 118 2e-25 UniRef50_A3TR75 Putative amidase n=1 Tax=Janibacter sp. HTCC2649... 118 2e-25 UniRef50_D1SBP4 N-acetylmuramyl-L-alanine amidase, negative regu... 117 4e-25 UniRef50_C4DKK4 Negative regulator of beta-lactamase expression ... 117 4e-25 UniRef50_Q0AY32 Negative regulator of beta-lactamase expression-... 117 4e-25 UniRef50_C6JDZ2 Putative uncharacterized protein n=1 Tax=Ruminoc... 117 6e-25 UniRef50_B3QCK8 N-acetylmuramyl-L-alanine amidase, negative regu... 117 6e-25 UniRef50_C5T4Q5 N-acetylmuramyl-L-alanine amidase, negative regu... 116 8e-25 UniRef50_C1D367 Putative bifunctional protein, : N-acetylmuramoy... 116 9e-25 UniRef50_Q2SEW1 Negative regulator of beta-lactamase expression ... 116 1e-24 UniRef50_B1TGB7 N-acetylmuramyl-L-alanine amidase, negative regu... 115 1e-24 UniRef50_B5U5V5 Gp50 n=12 Tax=unclassified Siphoviridae RepID=B5... 115 2e-24 UniRef50_D2AYL5 Negative regulator of beta-lactamase expression-... 113 9e-24 UniRef50_Q7V7M8 N-acetylmuramoyl-L-alanine amidase (Family 2) n=... 112 2e-23 UniRef50_Q31KQ2 N-acetylmuramoyl-L-alanine amidase, family 2 n=2... 111 2e-23 UniRef50_A5Z412 Putative uncharacterized protein n=1 Tax=Eubacte... 111 3e-23 UniRef50_B9XDJ6 N-acetylmuramyl-L-alanine amidase, negative regu... 111 3e-23 UniRef50_C7N6M2 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Slack... 110 4e-23 UniRef50_B2A1Q6 N-acetylmuramoyl-L-alanine amidase family 2 n=1 ... 110 5e-23 UniRef50_A9B3J4 N-acetylmuramyl-L-alanine amidase, negative regu... 110 5e-23 UniRef50_C0CQ24 Putative uncharacterized protein n=4 Tax=Clostri... 110 6e-23 UniRef50_B0G3S2 Putative uncharacterized protein n=5 Tax=Clostri... 110 8e-23 UniRef50_UPI0001BC309D N-acetylmuramoyl-L-alanine amidase n=1 Ta... 109 1e-22 UniRef50_C0WEF9 Putative uncharacterized protein n=1 Tax=Acidami... 109 1e-22 UniRef50_C7Q860 N-acetylmuramyl-L-alanine amidase, negative regu... 109 1e-22 UniRef50_B1ABI9 Putative uncharacterized protein n=1 Tax=Lactoco... 108 2e-22 UniRef50_C4ZEY9 N-acetylmuramoyl-L-alanine amidase n=3 Tax=Clost... 108 2e-22 UniRef50_A3DIC1 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clost... 107 4e-22 UniRef50_B6BGC2 B-N-acetylglucosaminidase, glycoside hydrolase f... 107 5e-22 UniRef50_Q3AXW0 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 107 7e-22 UniRef50_C3EV93 N-acetylmuramoyl-L-alanine amidase n=11 Tax=Baci... 106 7e-22 UniRef50_B5CSL4 Putative uncharacterized protein n=4 Tax=Clostri... 106 9e-22 UniRef50_UPI0001B554B9 secreted amidase n=1 Tax=Streptomyces sp.... 106 1e-21 UniRef50_B0MAX7 Putative uncharacterized protein n=1 Tax=Anaeros... 105 1e-21 UniRef50_C5RQQ9 N-acetylmuramoyl-L-alanine amidase family 2 n=3 ... 105 1e-21 UniRef50_C0F005 Putative uncharacterized protein n=1 Tax=Eubacte... 105 1e-21 UniRef50_B1V3W0 N-acetylmuramoyl-L-alanine amidase, family 2 n=8... 105 2e-21 UniRef50_B8HV25 N-acetylmuramyl-L-alanine amidase, negative regu... 105 2e-21 UniRef50_A6CD01 Probable N-acetylmuramoyl-L-alanine amidase n=1 ... 104 3e-21 UniRef50_Q9ZX49 Gp29 n=1 Tax=Mycobacterium phage TM4 RepID=Q9ZX4... 104 4e-21 UniRef50_UPI00019739B2 N-acetylmuramoyl-L-alanine amidase n=1 Ta... 103 5e-21 UniRef50_C0Z5F5 Putative N-acetylmuramoyl-L-alanine amidase n=1 ... 103 5e-21 UniRef50_P81717 N-acetylmuramoyl-L-alanine amidase A n=1 Tax=Ach... 103 5e-21 UniRef50_P14892 N-acetylmuramoyl-L-alanine amidase cwlA n=7 Tax=... 103 6e-21 UniRef50_C7UBT6 Sporulation domain-containing protein n=3 Tax=Ba... 103 6e-21 UniRef50_B7HAI4 N-acetylmuramoyl-L-alanine amidase n=19 Tax=Baci... 103 6e-21 UniRef50_Q04T28 Amidase n=4 Tax=Leptospira RepID=Q04T28_LEPBJ 103 7e-21 UniRef50_C7GYS0 Putative N-acetylmuramoyl-L-alanine amidase CwlA... 103 7e-21 UniRef50_A7GU51 N-acetylmuramoyl-L-alanine amidase family 2 n=99... 103 8e-21 UniRef50_A0LPT1 N-acetylmuramyl-L-alanine amidase, negative regu... 103 1e-20 UniRef50_C0G0C8 N-acetylmuramyl-L-alanine amidase, negative regu... 102 1e-20 UniRef50_C3GU84 N-acetylmuramoyl-L-alanine amidase / S-layer pro... 102 1e-20 UniRef50_Q855S8 Gp35 n=10 Tax=root RepID=Q855S8_9CAUD 102 1e-20 UniRef50_A5Z605 Putative uncharacterized protein n=1 Tax=Eubacte... 102 1e-20 UniRef50_D2QH68 N-acetylmuramyl-L-alanine amidase, negative regu... 102 1e-20 UniRef50_A3ICX8 XlyB n=3 Tax=Bacillaceae RepID=A3ICX8_9BACI 102 2e-20 UniRef50_C8VXP6 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Pepto... 101 3e-20 UniRef50_B8HPP1 N-acetylmuramyl-L-alanine amidase, negative regu... 101 3e-20 UniRef50_A9VVT9 N-acetylmuramoyl-L-alanine amidase n=50 Tax=root... 101 3e-20 UniRef50_A8RYS3 Putative uncharacterized protein n=3 Tax=Clostri... 101 3e-20 UniRef50_B5GCG4 Putative uncharacterized protein n=1 Tax=Strepto... 100 4e-20 UniRef50_C0QM08 Putative N-acetylmuramoyl-L-alanine amidase AmpD... 100 4e-20 UniRef50_A7VR21 Putative uncharacterized protein n=1 Tax=Clostri... 100 4e-20 UniRef50_UPI0001BCD943 Peptidoglycan-binding domain 1 protein n=... 100 4e-20 UniRef50_B4ALM5 N-acetylmuramoyl-L-alanine amidase CwlA (Cellwal... 100 4e-20 UniRef50_A7VT90 Putative uncharacterized protein n=2 Tax=Clostri... 100 5e-20 UniRef50_C9Y7L0 1,6-anhydro-N-acetylmuramyl-L-alanine amidase am... 100 5e-20 UniRef50_Q65KE6 N-acetylmuramoyl-L-alanine amidase n=3 Tax=root ... 100 6e-20 UniRef50_B9XPB1 N-acetylmuramyl-L-alanine amidase, negative regu... 100 6e-20 UniRef50_Q05S34 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 100 7e-20 UniRef50_Q160K6 N-acetyl-anhydromuramyl-L-alanine amidase, putat... 100 8e-20 UniRef50_D0LV42 N-acetylmuramyl-L-alanine amidase, negative regu... 100 8e-20 UniRef50_A5IAD5 N-acetylmuramoyl-L-alanine amidase; amidase 2 n=... 100 8e-20 UniRef50_B9XKL0 N-acetylmuramyl-L-alanine amidase, negative regu... 100 9e-20 UniRef50_B5LGB7 Amidase n=10 Tax=unclassified Siphoviridae RepID... 100 9e-20 UniRef50_A3K174 Spore cortex-lytic enzyme n=2 Tax=Sagittula stel... 100 1e-19 UniRef50_C7MQ69 Negative regulator of beta-lactamase expression ... 100 1e-19 UniRef50_A0M513 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Grame... 100 1e-19 UniRef50_C7PLI7 Peptidase C14 caspase catalytic subunit p20 n=1 ... 99 1e-19 UniRef50_Q925X1 Lin2374 protein n=2 Tax=Listeria RepID=Q925X1_LISIN 99 1e-19 UniRef50_A9AWE2 N-acetylmuramoyl-L-alanine amidase family 2 n=2 ... 99 1e-19 UniRef50_D1WT65 N-acetylmuramoyl-L-alanine amidase family 2 n=11... 99 2e-19 UniRef50_A5ZPJ2 Putative uncharacterized protein n=3 Tax=Clostri... 99 2e-19 UniRef50_P39800 N-acetylmuramoyl-L-alanine amidase xlyA n=4 Tax=... 99 2e-19 UniRef50_B8FLA2 N-acetylmuramyl-L-alanine amidase, negative regu... 98 3e-19 UniRef50_C3DAX2 N-acetylmuramoyl-L-alanine amidase n=10 Tax=Baci... 97 4e-19 UniRef50_A4BV20 N-acetylmuramoyl-L-alanine amidase, putative n=1... 97 6e-19 UniRef50_C9A1B6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Enter... 97 6e-19 UniRef50_B9L0F4 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 97 7e-19 UniRef50_C7Q684 N-acetylmuramyl-L-alanine amidase, negative regu... 96 9e-19 UniRef50_B9YE42 Putative uncharacterized protein n=1 Tax=Holdema... 96 9e-19 UniRef50_UPI0001693C62 N-acetylmuramoyl-L-alanine amidase, famil... 96 9e-19 UniRef50_B5LLI8 Gp242 n=8 Tax=unclassified Myoviridae RepID=B5LL... 96 1e-18 UniRef50_A6NPI6 Putative uncharacterized protein n=1 Tax=Bactero... 96 1e-18 UniRef50_D1N8S7 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Victi... 96 1e-18 UniRef50_C6IXL5 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Paeni... 96 1e-18 UniRef50_C1I9T8 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Clost... 96 1e-18 UniRef50_Q5L2J6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Geoba... 96 1e-18 UniRef50_UPI0001C1705F AmpD n=2 Tax=Nostocaceae RepID=UPI0001C1705F 95 2e-18 UniRef50_C7MM46 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Crypt... 95 2e-18 UniRef50_B6BVD5 N-acetylmuramyl-L-alanine amidase, negative regu... 95 2e-18 UniRef50_A0YR44 AmpD n=3 Tax=Oscillatoriales RepID=A0YR44_9CYAN 94 4e-18 UniRef50_B8HSE7 N-acetylmuramyl-L-alanine amidase, negative regu... 94 4e-18 UniRef50_Q30PL8 Negative regulator of AmpC, AmpD n=4 Tax=Bacteri... 94 4e-18 UniRef50_B0C6S0 N-acetyl-anhydromuramyl-L-alanine amidase, putat... 94 4e-18 UniRef50_D0LH65 N-acetylmuramyl-L-alanine amidase, negative regu... 94 6e-18 UniRef50_Q8DLW7 Tlr0359 protein n=1 Tax=Thermosynechococcus elon... 93 8e-18 UniRef50_A8E261 Putative N-acetylmuramoyl-L-alanine amidase n=1 ... 93 9e-18 Sequences not found previously or not previously below threshold: UniRef50_B5H952 Phage protein n=4 Tax=Streptomyces RepID=B5H952_... 100 1e-19 >UniRef50_P75820 N-acetylmuramoyl-L-alanine amidase amiD n=119 Tax=Enterobacteriaceae RepID=AMID_ECOLI Length = 276 Score = 334 bits (857), Expect = 2e-90, Method: Composition-based stats. Identities = 276/276 (100%), Positives = 276/276 (100%) Query: 1 MRRFFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSL 60 MRRFFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSL Sbjct: 1 MRRFFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSL 60 Query: 61 ATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIEL 120 ATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIEL Sbjct: 61 ATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIEL 120 Query: 121 ENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPL 180 ENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPL Sbjct: 121 ENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPL 180 Query: 181 FPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRR 240 FPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRR Sbjct: 181 FPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRR 240 Query: 241 VIMAFQMHFRPTLYNGEADAETQAIAEALLEKYGQD 276 VIMAFQMHFRPTLYNGEADAETQAIAEALLEKYGQD Sbjct: 241 VIMAFQMHFRPTLYNGEADAETQAIAEALLEKYGQD 276 >UniRef50_C5BFW7 N-acetylmuramoyl-L-alanine amidase AmiD n=14 Tax=Enterobacteriaceae RepID=C5BFW7_EDWI9 Length = 294 Score = 304 bits (779), Expect = 2e-81, Method: Composition-based stats. Identities = 137/278 (49%), Positives = 179/278 (64%), Gaps = 4/278 (1%) Query: 1 MRRFFWLVAAALLLAGCAGEKGIVE-KEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSS 59 + + + A +L+ C +E ++GY A RI+ LV+HYTA D SS Sbjct: 13 IEKLVVVTILAFMLSACVRHSDKIEARDGYFASHAFTAVGQNERIRFLVLHYTAVDDVSS 72 Query: 60 LATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIE 119 L LT +QVS+HYL+P P +G+P + QLV E + AWHAGIS+W G + LNDTSIGIE Sbjct: 73 LNILTKEQVSAHYLIPKEPKSIHGQPVVLQLVDENKRAWHAGISSWNGRSGLNDTSIGIE 132 Query: 120 LENRGWQKSA-GVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPG 178 + N G+ + G + + P+ QI A+ LAKDI+ RYHI+P+NVV H+DIAP RK DPG Sbjct: 133 IVNLGYTDNMLGQRTWYPYTEKQIAAVAALAKDIVNRYHIEPDNVVGHSDIAPLRKQDPG 192 Query: 179 PLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKP--DMTPR 236 LFPW+ LA GIGAWPD VN YLA R+PH+PV + + LL +YGYD P + Sbjct: 193 KLFPWEHLAAMGIGAWPDRSTVNKYLADRSPHSPVKVSVIQALLKQYGYDQIPQNGVLDE 252 Query: 237 EQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKYG 274 R+ + AFQMHFRP+ +G ADAET+AIA ALLEKY Sbjct: 253 NTRKTVSAFQMHFRPSDISGNADAETEAIARALLEKYR 290 >UniRef50_D1P770 N-acetylmuramoyl-L-alanine amidase, family 2 n=3 Tax=Providencia RepID=D1P770_9ENTR Length = 295 Score = 300 bits (769), Expect = 3e-80, Method: Composition-based stats. Identities = 134/276 (48%), Positives = 167/276 (60%), Gaps = 6/276 (2%) Query: 1 MRRFFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSL 60 M R W ++ LL GC+ K GY LD ++ RI+ +V+HYT D S+ Sbjct: 1 MYRAIW-ISIIFLLVGCSTTP---SKTGYFLDQSHPSRNTSERIQYIVLHYTVSDDAHSI 56 Query: 61 ATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIEL 120 LT +VSSHYL+P+ P + NG+P I QLVPE+ AWHAG S W+ LND SIGIE+ Sbjct: 57 KILTKGKVSSHYLIPSQPEQKNGQPVILQLVPERLKAWHAGDSRWQYHHSLNDNSIGIEI 116 Query: 121 ENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPL 180 N G + G + PF +QI ALIPL DI+ RY I PENV+ H+DIAP RK DPG Sbjct: 117 VNEGLVRKNGQDIWQPFNDSQIDALIPLLSDIMQRYGIPPENVIGHSDIAPLRKQDPGRA 176 Query: 181 FPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKP--DMTPREQ 238 FPWQ LA GIGAWPD Q V +LAGR + P + L + L YGY P E Sbjct: 177 FPWQALALHGIGAWPDPQTVTKHLAGRQVNAPANVLRLQKALKFYGYAGIPQTGKLDAET 236 Query: 239 RRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKYG 274 +R + AFQ+HFRP +G ADAET+AIA AL+EKY Sbjct: 237 KRTLRAFQLHFRPRDIDGLADAETEAIALALIEKYR 272 >UniRef50_A1V4B3 N-acetylmuramoyl-L-alanine amidase domain protein n=59 Tax=Proteobacteria RepID=A1V4B3_BURMS Length = 314 Score = 300 bits (767), Expect = 4e-80, Method: Composition-based stats. Identities = 143/268 (53%), Positives = 175/268 (65%), Gaps = 1/268 (0%) Query: 7 LVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK 66 L+A+ +LA +V + Y DT A++A RI+ LV+HYT SL LT + Sbjct: 24 LLASFSMLAAACTTPTLVNRGDYYADTSLPARSADSRIRFLVMHYTEIGEAPSLRVLTQE 83 Query: 67 QVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQ 126 VS+HY+VP P G P ++QLVPE E AWHAG+SAW+GAT LN SIGIE NRG Sbjct: 84 NVSAHYVVPDAPRTERGAPVVYQLVPESERAWHAGVSAWQGATELNGVSIGIENVNRGPI 143 Query: 127 KSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQL 186 + + +AP+ PAQ+ A++ LAKDI+ARY I P VV H+DIAPQRK DPGPLFPW+ L Sbjct: 144 DTPHGRMWAPYPPAQVDAIVRLAKDIVARYRIPPTRVVGHSDIAPQRKIDPGPLFPWRAL 203 Query: 187 AQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDM-TPREQRRVIMAF 245 A+ G+GAWPD + V LAGR P + VD L LARYGYDV D RRV AF Sbjct: 204 AKAGVGAWPDDETVAARLAGRPPKSLVDVRELQLKLARYGYDVATDGVLDDRTRRVFSAF 263 Query: 246 QMHFRPTLYNGEADAETQAIAEALLEKY 273 QMHFRPT Y G DAET AIA+ALL+KY Sbjct: 264 QMHFRPTDYAGNPDAETDAIAQALLDKY 291 >UniRef50_A7FHD3 N-acetylmuramoyl-L-alanine amidase, family 2 n=28 Tax=Enterobacteriaceae RepID=A7FHD3_YERP3 Length = 283 Score = 296 bits (758), Expect = 5e-79, Method: Composition-based stats. Identities = 121/253 (47%), Positives = 166/253 (65%), Gaps = 1/253 (0%) Query: 23 IVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYN 82 ++++ YQ+DT + A R++ LV+HYTA D SL LT +VS+HYL+P P + Sbjct: 27 LIDRGAYQIDTHYPSVAKNERVRFLVLHYTAVDDAESLRLLTQGEVSAHYLIPTHPKKAG 86 Query: 83 GKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQI 142 GK QLVPE + AWHAG+S+W+G LNDTSIGIE+ N G+ + + + P+ +QI Sbjct: 87 GKAIALQLVPEAQRAWHAGVSSWQGRNNLNDTSIGIEIVNLGFTEKMLGRTWYPYNESQI 146 Query: 143 QALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNF 202 + + L KDI+ RY+I P +VVAH+DIAP RK DPGPLFPW++LA++G+GAWPD V Sbjct: 147 ELIEQLTKDIVQRYNISPSDVVAHSDIAPLRKSDPGPLFPWKRLAEKGVGAWPDDATVAK 206 Query: 203 YLAGRAPHTPVDTASLLELLARYGYDVKPDM-TPREQRRVIMAFQMHFRPTLYNGEADAE 261 Y+ GR A + + LA YGY + + E R+VI AFQMHFRP ++G D E Sbjct: 207 YIGGRDKKGAASVAVIQQALAAYGYKIPQNGQLDTETRQVIKAFQMHFRPQDFSGVPDVE 266 Query: 262 TQAIAEALLEKYG 274 T+AIA AL+EKY Sbjct: 267 TEAIALALVEKYR 279 >UniRef50_Q1QX12 Negative regulator of AmpC, AmpD n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QX12_CHRSD Length = 303 Score = 281 bits (718), Expect = 2e-74, Method: Composition-based stats. Identities = 123/272 (45%), Positives = 157/272 (57%), Gaps = 9/272 (3%) Query: 4 FFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATL 63 + W + L L CA + ++GYQ+D R A R++ LV+HYT D SL+TL Sbjct: 25 WLWAMPCLLALTACAA-PTLETRDGYQVDRRYTAPGQSSRVRHLVLHYTDSDARRSLSTL 83 Query: 64 TDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENR 123 T VS+HY++ P+I+QLV E AWHAG SAW T LNDTSIGIE+ NR Sbjct: 84 TGPHVSAHYVLTREA------PKIYQLVDESRRAWHAGASAWHSRTNLNDTSIGIEVVNR 137 Query: 124 GWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPW 183 G ++ + + P+ AQI LI LA+DI+AR+ I P +VV HADIAP+RK DPGP FPW Sbjct: 138 GPYQTPAGRAWTPYPSAQIDTLIALARDIVARHAIDPVDVVGHADIAPRRKIDPGPRFPW 197 Query: 184 QQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDM-TPREQRRVI 242 +L + GIGAWP+ RV Y R +P LA YGY V + Sbjct: 198 YRLYRAGIGAWPETARVMAY-QRRFMASPPSLTQWQRALAAYGYPVAVTGRFDALTHDTL 256 Query: 243 MAFQMHFRPTLYNGEADAETQAIAEALLEKYG 274 AFQMHFRPT ++G DA + AI ALLEKY Sbjct: 257 RAFQMHFRPTRHDGFPDAHSAAILWALLEKYR 288 >UniRef50_A9KGI9 Anhydro-N-acetylmuramyl-tripeptide amidase n=16 Tax=Proteobacteria RepID=A9KGI9_COXBN Length = 257 Score = 280 bits (717), Expect = 3e-74, Method: Composition-based stats. Identities = 115/249 (46%), Positives = 159/249 (63%), Gaps = 6/249 (2%) Query: 28 GYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK--QVSSHYLVPAVPPRYNGKP 85 Y+++ A+ RI+ LV+HYTA +F+ SL LT + VS HYL+P +GK Sbjct: 2 TYEINLNYPAKNFDKRIRFLVLHYTAKNFEDSLEILTQEAFGVSGHYLIPES--SIDGKK 59 Query: 86 RIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQAL 145 +I+QLVPE+ AWHAG+SAW+G LNDTSIGIE+ N G+Q+ + + PF QI+ + Sbjct: 60 QIFQLVPEKHRAWHAGVSAWQGRIHLNDTSIGIEIVNLGYQEEGEKRRWFPFLDYQIELI 119 Query: 146 IPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLA 205 I LAKDII RY + P VV H+DI+P+RK DPGPLFPW++L +QGIGAW + + + Sbjct: 120 IELAKDIIERYQLHPTCVVGHSDISPERKADPGPLFPWKKLYEQGIGAWYEDECKKE-ME 178 Query: 206 GRAPHTPVDTASLLELLARYGYDVKPDM-TPREQRRVIMAFQMHFRPTLYNGEADAETQA 264 R + D L L YGY ++ ++ ++V+ AFQMHFRPT Y+G D ET A Sbjct: 179 RRLSNETTDIRWLQRHLKTYGYSIEETGELDKKTQQVVCAFQMHFRPTDYSGIPDKETYA 238 Query: 265 IAEALLEKY 273 I AL++KY Sbjct: 239 ILYALVKKY 247 >UniRef50_C9MVU9 N-acetylmuramoyl-L-alanine amidase domain protein n=2 Tax=Leptotrichia RepID=C9MVU9_9FUSO Length = 322 Score = 280 bits (717), Expect = 3e-74, Method: Composition-based stats. Identities = 97/266 (36%), Positives = 146/266 (54%), Gaps = 13/266 (4%) Query: 14 LAGCAGEKGIVEKEG-YQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHY 72 ++G G + I G +D+ ++ R + +++HYTA D D SL LT+ +VS+HY Sbjct: 65 VSGRGGMQTIRNSAGSITVDSSYSSKGQNYRQRFIILHYTAMDRDGSLRALTNNEVSAHY 124 Query: 73 LVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVK 132 L+ ++ LV E AWHAG S W+ + LND+SIGIE+ N G + Sbjct: 125 LISNQKNDP-----VFYLVDENRRAWHAGASEWKTSKNLNDSSIGIEIVNSGNVSGS--- 176 Query: 133 YFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQL-AQQGI 191 F PF QI+ + L K + +Y I N++ H+DIAPQRK DPGPLFPW++L + I Sbjct: 177 -FEPFRDFQIKDVAVLVKYLADKYEIPATNILGHSDIAPQRKPDPGPLFPWEELYRKYNI 235 Query: 192 GAWPDAQRVNFYLAGRA-PHTPVDTASLLELLARYGYDVKPDM-TPREQRRVIMAFQMHF 249 G W D R + + + + A++ L+++GY + + + VI FQ HF Sbjct: 236 GMWYDNDRKSAFENEYSLSWASLPAATVQAELSKFGYSISTTGRWDEQTKNVIKVFQYHF 295 Query: 250 RPTLYNGEADAETQAIAEALLEKYGQ 275 RP+ Y+G+ D ET AI +AL EKY + Sbjct: 296 RPSKYDGKLDLETYAILKALNEKYNK 321 >UniRef50_A6UZQ6 N-acetylmuramoyl-L-alanine amidase AmiD n=53 Tax=Proteobacteria RepID=A6UZQ6_PSEA7 Length = 291 Score = 273 bits (699), Expect = 4e-72, Method: Composition-based stats. Identities = 116/289 (40%), Positives = 156/289 (53%), Gaps = 18/289 (6%) Query: 3 RFFWLVAAALLLAGCAGEKGIVEKEG-----------YQLDTRRQAQAAYPRIKVLVIHY 51 + ++A AL LAGC + + ++ R + A R++ LV+HY Sbjct: 4 KNLCVLACALGLAGCLQGAVVERPDAHGETLAPPPLAIDYNSYRTSAAYNKRVRYLVLHY 63 Query: 52 TADDFDSSLATLTDKQVSSHYLVPAVPPRYNGK-----PRIWQLVPEQELAWHAGISAWR 106 TA DF S+ LT S+HYLVP+ + RI+ LV E + AWHAG+S+W Sbjct: 64 TALDFSRSVEMLTRGPGSAHYLVPSPADASYRRAGFSGQRIFNLVDENDRAWHAGVSSWG 123 Query: 107 GATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYH-IKPENVVA 165 G LND+SIGIE+ N GV F +EP+QI+AL LA++I+ RY I P++V+ Sbjct: 124 GREGLNDSSIGIEIVNLARDDD-GVFTFPDYEPSQIEALRQLARNILQRYPDISPKHVLG 182 Query: 166 HADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARY 225 H+DIA RK DPGP PW++L GIGAW D + Y A A LE L RY Sbjct: 183 HSDIAVGRKSDPGPKLPWKELHDAGIGAWYDDATRDRYQARFERDGLPSRAEWLEALRRY 242 Query: 226 GYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKYG 274 GY V + ++ AFQMHFRP ++G ADAET AI AL E+Y Sbjct: 243 GYAVPERGNDEDFANLLRAFQMHFRPDNHDGVADAETAAILYALNERYS 291 >UniRef50_C7NA60 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=3 Tax=Fusobacteriaceae RepID=C7NA60_LEPBD Length = 316 Score = 272 bits (696), Expect = 8e-72, Method: Composition-based stats. Identities = 96/261 (36%), Positives = 141/261 (54%), Gaps = 12/261 (4%) Query: 18 AGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAV 77 E +D+ ++ R + +++HYTA + D SL LT VSSHYLV Sbjct: 65 GTETISNSAGSITVDSSYTSKGQNYRQRFIILHYTAVNRDGSLRALTGNDVSSHYLVSDQ 124 Query: 78 PPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPF 137 ++ LV E + AWHAG S W+ LND+SIGIE+ N G F PF Sbjct: 125 KNDP-----VFYLVDENKRAWHAGASEWKTTKNLNDSSIGIEIVNNGDVSG----RFEPF 175 Query: 138 EPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQL-AQQGIGAWPD 196 + QI+ + L + +I +Y I P N++ H+DIAPQRK DPGPLFPW++L + IG W D Sbjct: 176 KDFQIKEVAVLVRHLIDKYEIPPTNILGHSDIAPQRKPDPGPLFPWEELNKKYNIGMWYD 235 Query: 197 AQRVNFYLAGRAP-HTPVDTASLLELLARYGYDVKPDM-TPREQRRVIMAFQMHFRPTLY 254 + + Y + A + A++ +++GY V + + +I AFQ HFRP+ Y Sbjct: 236 SSSKSMYESQYASTWDTIPAATVQAEFSKFGYAVNQTGRWDEQTKNIIKAFQYHFRPSKY 295 Query: 255 NGEADAETQAIAEALLEKYGQ 275 +G+ D ET AI +AL +KY + Sbjct: 296 DGKLDLETYAILKALNDKYNK 316 >UniRef50_A5WCW3 N-acetylmuramoyl-L-alanine amidase, family 2 n=5 Tax=Bacteria RepID=A5WCW3_PSYWF Length = 308 Score = 272 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 106/285 (37%), Positives = 153/285 (53%), Gaps = 25/285 (8%) Query: 4 FFWLVAAALLLAGCAGEKGIVEKEGYQLDT-RRQAQAAYPRIKVLVIHYTADDFDSSLAT 62 L A +L L+GC G Y +D+ QAQ RIK +V+HYTA++ SL Sbjct: 30 IISLAAVSLTLSGCMGLP----ATTYAIDSQSYQAQGKSQRIKYIVLHYTAENEPESLRI 85 Query: 63 LTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELEN 122 LT VS+HYL+P I+QLVP+ + AWHAG ++ G + LNDTSIGIE+ N Sbjct: 86 LTTANVSAHYLIP-----ITDDKPIYQLVPDNQRAWHAGQGSFAGRSILNDTSIGIEIVN 140 Query: 123 RG------------WQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIA 170 G +++ F QI+ + L +D+ +Y I+P ++ H+D+A Sbjct: 141 EGIQQQFRKAKNTDNDGYHPAEHYVEFTDIQIKKIAQLVQDLAQKYEIEPTLIIGHSDMA 200 Query: 171 PQRKDDPGPLFPWQQLAQ-QGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDV 229 P RK DPG FPW++L + GIGAW + ++ + A + ++L+ YGYD+ Sbjct: 201 PSRKIDPGAKFPWERLYKEYGIGAWYEEADKQQFMTEGSF-QSATVADIQQMLSDYGYDI 259 Query: 230 KP-DMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKY 273 P D R R V+ AFQ+HFRP G+ D ET AI +AL +KY Sbjct: 260 TPSDEWDRSSRNVVYAFQLHFRPQKLTGQMDLETYAILKALNKKY 304 >UniRef50_C0YHQ4 Possible N-acetylmuramoyl-L-alanine amidase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YHQ4_9FLAO Length = 319 Score = 266 bits (681), Expect = 4e-70, Method: Composition-based stats. Identities = 106/268 (39%), Positives = 143/268 (53%), Gaps = 14/268 (5%) Query: 15 AGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLV 74 A + T A A R + L++HYTA D S+ LT + VS+HYLV Sbjct: 54 ASYGSIVSAKPAGYKVVKTYFPAIAQNFRQRYLILHYTALPDDKSITVLTQQAVSAHYLV 113 Query: 75 PAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSA-GVKY 133 G I+QLV E + ++HAG+SAWR LNDTSIGIE+ N G+ A G + Sbjct: 114 NNT-----GDNEIYQLVDENKRSYHAGVSAWRNDKNLNDTSIGIEIVNTGYTTDATGKRT 168 Query: 134 FAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLA-QQGIG 192 FAPF Q++ + L KDI+ RY I+P NV+ H+DIAP RK DPGP+FPW++L + IG Sbjct: 169 FAPFSDDQVKKVAALVKDIVTRYQIQPTNVLGHSDIAPTRKQDPGPMFPWKKLYDEYQIG 228 Query: 193 AWPDAQRVNFYLAGRAP------HTPVDTASLLELLARYGYDVKPDM-TPREQRRVIMAF 245 W D YL + P + L ++GY + + ++ I AF Sbjct: 229 MWYDEAAKQTYLEAAQADITAKYNEPGFIFLIQTSLQKFGYALDSNGQWDDATKKTIEAF 288 Query: 246 QMHFRPTLYNGEADAETQAIAEALLEKY 273 Q HFRP Y+G DAET AI +AL +KY Sbjct: 289 QYHFRPQNYDGIMDAETWAILQALNQKY 316 >UniRef50_Q4ZZT4 N-acetylmuramoyl-L-alanine amidase, family 2 n=10 Tax=Pseudomonas RepID=Q4ZZT4_PSEU2 Length = 283 Score = 266 bits (679), Expect = 7e-70, Method: Composition-based stats. Identities = 104/263 (39%), Positives = 149/263 (56%), Gaps = 15/263 (5%) Query: 10 AALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVS 69 LLL CA G +LDT + R + +V+HYT+ + SL LT +VS Sbjct: 33 LMLLLTACAS--------GPRLDTSHPSVNFDGRAQYVVMHYTSTSLEHSLQLLTHGEVS 84 Query: 70 SHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSA 129 +HYL+ I++LV E AWHAG S W G T LN +SIGIE+ N G++++ Sbjct: 85 AHYLIGDDSKA-----TIYKLVDENARAWHAGESEWEGRTWLNSSSIGIEIVNPGFKETP 139 Query: 130 GVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQ 189 + + P+ AQ Q++I L KDI+ R I P++++ H+DIAP RK DPGPLFPW++LA + Sbjct: 140 TGRLWYPYTEAQTQSIIVLLKDIVKRNRIDPKHIIGHSDIAPLRKQDPGPLFPWKRLAAE 199 Query: 190 GIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDM-TPREQRRVIMAFQMH 248 G+G WPD ++V A A + P + LAR GY R+V+ AFQMH Sbjct: 200 GLGNWPDERQVAQRQALLATNLPS-ITWFQQQLARLGYSTPQTGELDVATRQVLAAFQMH 258 Query: 249 FRPTLYNGEADAETQAIAEALLE 271 +RP ++GE DA++ AI + L Sbjct: 259 YRPARFDGEPDAQSAAILQVLNH 281 >UniRef50_C0QVR5 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QVR5_BRAHW Length = 342 Score = 263 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 98/297 (32%), Positives = 148/297 (49%), Gaps = 33/297 (11%) Query: 3 RFFWLVAAALLLAGCAGE---KGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSS 59 RF +L+A L++ C E K ++ + ++ A RIK +++HYTA + D S Sbjct: 6 RFIYLLAVILVITSCNDENITPIRTRKIAPKVSSAFKSPAYNLRIKYIILHYTALNDDLS 65 Query: 60 LATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIE 119 LTD VS+HYL+ I++LV + + AWHAGI+ + +NDTSIGIE Sbjct: 66 FKVLTDPGVSAHYLITTREDEP-----IYKLVDDNDRAWHAGITMFDNRHSMNDTSIGIE 120 Query: 120 LENRGWQKSAGV---------------------KYFAPFEPAQIQALIPLAKDIIARYHI 158 + N G+ + + FE +QI + L K++I +Y I Sbjct: 121 IVNLGFLQKVTNTYEDLRRMTKKQREELFFIPYDEYIEFEDSQIDKVAYLLKELIEKYGI 180 Query: 159 KPENVVAHADIAPQRKDDPGPLFPWQQLA-QQGIGAWPDAQRVNFYLAGRAPHTPVDTAS 217 KP N++ H+DIAP RK DPGP FPW++L + +G W D + +L + Sbjct: 181 KPYNILGHSDIAPYRKKDPGPKFPWKRLYDEYNLGIWYDEYDYSNFLNDN-EYRKAKVMD 239 Query: 218 LLELLARYGYDVKP--DMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEK 272 + E +YGY P ++ + R+V+ AFQ HFRP +G D ET A+ AL K Sbjct: 240 IKEEFIKYGYTSMPTNNVWDFDSRKVLYAFQCHFRPEKIDGNIDNETYAVIRALNLK 296 >UniRef50_Q3JK19 N-acetylmuramoyl-L-alanine amidase domain protein n=8 Tax=Proteobacteria RepID=Q3JK19_BURP1 Length = 454 Score = 263 bits (671), Expect = 6e-69, Method: Composition-based stats. Identities = 119/293 (40%), Positives = 163/293 (55%), Gaps = 24/293 (8%) Query: 2 RRFFWLVAAALL-LAGCAGEKGIVEKE-----------GYQLDTRRQAQAAYPRIKVLVI 49 R W V +L LAGC G+V GY +D Q+ R++ LV+ Sbjct: 130 RSSAWPVGMLMLPLAGCGDGDGVVPSAHAQDTPPPSGAGYTIDRSIQSPNQDSRVRTLVL 189 Query: 50 HYTADDFDSSLATLT--DKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRG 107 HYTA S+A+LT +QVS+HYLVP + ++++LVP+ AWHAG+S W+G Sbjct: 190 HYTAQTLADSIASLTSPQRQVSAHYLVPDAADD-GRRFKVFELVPQARRAWHAGVSYWQG 248 Query: 108 ATRLNDTSIGIELENRGWQKSAGV-----KYFAPFEPAQIQALIPLAKDIIARYHIKPEN 162 LN S+GIE+ N G+ + + P+ AQ+ LA D++A++ + P Sbjct: 249 DRMLNAGSVGIEIVNLGFPPEDENLPLMNRRWYPYPDAQVAVFGALAADVVAQHQVLPHK 308 Query: 163 VVAHADIAPQRKDDPGPLFPWQQLA-QQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLEL 221 VV H+D+AP RK DPGPLFPW++L Q IGAWP+A+ V++Y R D ASL Sbjct: 309 VVGHSDVAPGRKTDPGPLFPWKKLYDQYKIGAWPEAEAVDYYRVNRPFAG--DVASLQSK 366 Query: 222 LARYGYDVKPDMT-PREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKY 273 L YGYD T + V+ AFQMHFRP+ Y+G D ET AI +ALLEKY Sbjct: 367 LLAYGYDTPQTGTLDAQTVNVVSAFQMHFRPSRYDGVPDVETVAILDALLEKY 419 >UniRef50_A4VRS8 N-acetylmuramoyl-L-alanine amidase family protein n=19 Tax=Proteobacteria RepID=A4VRS8_PSEU5 Length = 262 Score = 259 bits (663), Expect = 6e-68, Method: Composition-based stats. Identities = 110/252 (43%), Positives = 150/252 (59%), Gaps = 8/252 (3%) Query: 26 KEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKP 85 G ++DT + R++ +V+HYT+ D SL L+ + VSSHYL+ P Sbjct: 17 ASGPRIDTSHSSIGHDSRVQFIVLHYTSTDLPRSLELLSGRDVSSHYLIGESPA------ 70 Query: 86 RIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKS-AGVKYFAPFEPAQIQA 144 I++LV E AWHAG S W G T LN TSIGIEL N+G+++S G + + P+ AQI A Sbjct: 71 TIYRLVDEDRRAWHAGESEWNGRTWLNATSIGIELVNQGYEQSADGRRLWYPYSQAQIDA 130 Query: 145 LIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYL 204 L+ L KDI+AR+ +KP ++ H+DIAPQRK DPGPLFPW++LA++G+ WPDA V Sbjct: 131 LVVLLKDIMARHGLKPGAIIGHSDIAPQRKVDPGPLFPWKRLAEEGLVPWPDAGAVAAAQ 190 Query: 205 AGRAPHTPVDTASLLELLARYGYDVKP-DMTPREQRRVIMAFQMHFRPTLYNGEADAETQ 263 A A E LA GY V E R VI AFQM +RPT ++GE DAET Sbjct: 191 AHYAAAGLPAIGWFQEALAAQGYRVPRHGHLDDETRNVIAAFQMKYRPTRFDGEPDAETA 250 Query: 264 AIAEALLEKYGQ 275 A+ + L+ + + Sbjct: 251 AMLQVLVAQASR 262 >UniRef50_C7XRK8 Glutaminase n=10 Tax=Fusobacterium RepID=C7XRK8_9FUSO Length = 301 Score = 259 bits (662), Expect = 8e-68, Method: Composition-based stats. Identities = 92/305 (30%), Positives = 148/305 (48%), Gaps = 38/305 (12%) Query: 1 MRRFFWLVAAALLLAGCAGEKGIVEKEGYQLDT----------------------RRQAQ 38 M++ ++ L+ C+ + + ++ A Sbjct: 1 MKKILAFISLLFLMVACSSTEDVKSSGNRNINRGSNISRSQTTIRNIGKFQVDSNSYVAT 60 Query: 39 AAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAW 98 R++ +++HYTA D S+ LT +VSSH+LV +I+ LVP ++ AW Sbjct: 61 GKNERVQFIILHYTATDNLGSIKELTSSRVSSHFLVLDED-----DNKIYNLVPLEQRAW 115 Query: 99 HAGISAWRGATRLNDTSIGIELENRGW--------QKSAGVKYFAPFEPAQIQALIPLAK 150 HAG SA+RG T +NDTS+GIE+ + G ++ ++P QI+ + K Sbjct: 116 HAGASAFRGRTNINDTSVGIEIVSDGIAKEFIADPNPYHPYDHYVDYKPIQIEKAAQIIK 175 Query: 151 DIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLA-QQGIGAWPDAQRVNFYLAGRAP 209 + +Y+I N++AH+DIAP RK DPG FPW++L + IGAW D ++ Sbjct: 176 YVAEKYNIPARNILAHSDIAPSRKKDPGAKFPWKELYDKYNIGAWYDEADKQEFMDEEKF 235 Query: 210 HTPVDTASLLELLARYGYDVKP-DMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEA 268 + + + L +YGY++ D +E + V+ AFQ+HF P GE D ET AI +A Sbjct: 236 NATS-IREIKDELRKYGYEINRFDEWDKESKDVVYAFQLHFNPKNPTGEMDLETFAILKA 294 Query: 269 LLEKY 273 L +KY Sbjct: 295 LNKKY 299 >UniRef50_C1QGN2 Negative regulator of beta-lactamase expression n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QGN2_9SPIR Length = 344 Score = 258 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 95/295 (32%), Positives = 145/295 (49%), Gaps = 33/295 (11%) Query: 5 FWLVAAALLLAGCAGE---KGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLA 61 + +AL+L C K ++ T ++ A RIK +++HYTA D D SL Sbjct: 8 ILFLISALVLFSCNDNTSAPIRSRKIAPKISTVFKSPAYNLRIKYIILHYTALDDDLSLK 67 Query: 62 TLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELE 121 LTD VS+HYL+ I++LV + AWHAG++ + +NDTSIGIE+ Sbjct: 68 VLTDPGVSAHYLITTRENDP-----IYKLVDDNNRAWHAGVTMFDNRLTMNDTSIGIEIV 122 Query: 122 NRGWQKSAGV---------------------KYFAPFEPAQIQALIPLAKDIIARYHIKP 160 N G+ + + + +QIQ ++ L +++I +Y +KP Sbjct: 123 NLGFLEKVTNTQEQLRRMTKRERENLFFIPYDEYLEYNESQIQKVVYLLRNLIDKYGVKP 182 Query: 161 ENVVAHADIAPQRKDDPGPLFPWQQLA-QQGIGAWPDAQRVNFYLAGRAPHTPVDTASLL 219 N++ H+DIAP RK DPGP FPW++L + +G W D +L + + Sbjct: 183 YNILGHSDIAPYRKKDPGPKFPWKRLHDEYNLGMWYDEYDYTNFLNDN-EYKKAKVLDIK 241 Query: 220 ELLARYGYDVKP--DMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEK 272 E +YGY P ++ + R+V+ AFQ HFRP +G D E+ AI AL EK Sbjct: 242 EEFVKYGYTSMPTNNIWDFDSRKVLYAFQCHFRPEKIDGNIDNESYAIIRALNEK 296 >UniRef50_C6X3P6 N-acetylmuramoyl-L-alanine amidase n=3 Tax=Bacteria RepID=C6X3P6_FLAB3 Length = 342 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 110/266 (41%), Positives = 146/266 (54%), Gaps = 16/266 (6%) Query: 19 GEKGIVEKEGYQL-DTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAV 77 G +GY++ T A A R K +++HYTA D D S+ LT + VSSHYLV + Sbjct: 79 GSIVSANPQGYRVVKTFFPAVAQNFRQKYIILHYTALDDDKSVMVLTQQSVSSHYLVNNL 138 Query: 78 PPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGW-QKSAGVKYFAP 136 G I+QLV E + ++HAGIS WR + LNDTSIGIE+ N G+ S GVK F Sbjct: 139 -----GDREIYQLVDENKRSYHAGISTWRNDSMLNDTSIGIEIVNAGYVTDSTGVKIFPG 193 Query: 137 FEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLA-QQGIGAWP 195 F+ Q++ + L KDI RY I P N++AH+DIAP RK DPGP FPW++L + IG W Sbjct: 194 FDEGQVKKVAALVKDIAGRYMIPPTNILAHSDIAPTRKQDPGPKFPWKKLYDEYQIGMWY 253 Query: 196 DAQRVNFYLAGRAPHTPVDTAS-------LLELLARYGYDVKPDM-TPREQRRVIMAFQM 247 D +L P A+ L GY ++ ++ I AFQ Sbjct: 254 DESAKQNFLNQLTPEQFSAQAAESDFIYRYQLALKNLGYGLEASGRIDDSTKKTIEAFQY 313 Query: 248 HFRPTLYNGEADAETQAIAEALLEKY 273 HFRP +YNG DAE+ AI +AL +KY Sbjct: 314 HFRPEIYNGVMDAESWAILQALNQKY 339 >UniRef50_A9M6A2 Protein ampD n=39 Tax=Proteobacteria RepID=A9M6A2_BRUC2 Length = 268 Score = 251 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 85/244 (34%), Positives = 121/244 (49%), Gaps = 16/244 (6%) Query: 31 LDTRRQAQAAYPRIKVLVIHYTA-DDFDSSLATLTDKQ--VSSHYLVPAVPPRYNGKPRI 87 + + L++HYT ++ L + VS+HY+V + R+ Sbjct: 29 PSPNFGPRRDGKQPVFLILHYTGLVTAKEAMDVLKSPEMEVSAHYVV-------HEDGRV 81 Query: 88 WQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIP 147 Q+V E+ AWHAG S W+G T +N SIGIE+ N G ++ + PF AQI+A+I Sbjct: 82 VQMVSEKARAWHAGKSFWKGETDINSASIGIEIVNPGVLEN-----YPPFHDAQIEAVIR 136 Query: 148 LAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGR 207 L +DI R+ I+PENV+AH+DIAP RK DPG FPW++L GIG + + + Sbjct: 137 LCQDICKRHEIRPENVLAHSDIAPARKTDPGQSFPWKRLHDAGIGHYVEPTPICGGRFLA 196 Query: 208 APHTPVDTASLLELLARYGYDVKPDM-TPREQRRVIMAFQMHFRPTLYNGEADAETQAIA 266 +L +LA YGY++ VI AFQ HFRP +G AD T Sbjct: 197 RGEQGQPVEALQSMLALYGYEIAITGIFDEATEIVIKAFQRHFRPQNVDGVADVSTIDTL 256 Query: 267 EALL 270 L Sbjct: 257 YRLN 260 >UniRef50_A1UW52 N-acetylmuramoyl-L-alanine amidase domain protein n=62 Tax=Proteobacteria RepID=A1UW52_BURMS Length = 341 Score = 250 bits (638), Expect = 4e-65, Method: Composition-based stats. Identities = 115/265 (43%), Positives = 146/265 (55%), Gaps = 12/265 (4%) Query: 18 AGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK--QVSSHYLVP 75 + + +D + R++ LV+HYTA S+A LTD VS+HYLVP Sbjct: 46 GKPRDASGAQDVAIDASIASPNQDSRVRTLVLHYTAQTLARSVALLTDPARPVSAHYLVP 105 Query: 76 AVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGV---- 131 R++ LVPE AWHAG+S W+G LN +SIG+E+ N G+ + Sbjct: 106 DAADA-GTLFRVYALVPETNRAWHAGVSYWQGERLLNASSIGVEIVNTGFPDADENAPLM 164 Query: 132 -KYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLA-QQ 189 + +APF AQ+ + LA DI AR+ I P+ VV H+DIAP RK DPGPLFPW+ L Q Sbjct: 165 RRRWAPFPDAQMAVVGRLAADIAARHEIPPQKVVGHSDIAPGRKLDPGPLFPWRMLHEQY 224 Query: 190 GIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDM-TPREQRRVIMAFQMH 248 G+GAWPDA V +Y A R D A L L YGYD VI AFQMH Sbjct: 225 GVGAWPDAIAVEYYRACRPFRG--DIAELQAKLLAYGYDTPQTGVLDLRTTDVIAAFQMH 282 Query: 249 FRPTLYNGEADAETQAIAEALLEKY 273 FRP Y+G DAET AI +ALL+KY Sbjct: 283 FRPARYDGVPDAETVAILDALLDKY 307 >UniRef50_A4CAP2 Probable N-acetylmuramoyl-L-alanine amidase n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CAP2_9GAMM Length = 303 Score = 247 bits (631), Expect = 2e-64, Method: Composition-based stats. Identities = 101/295 (34%), Positives = 142/295 (48%), Gaps = 31/295 (10%) Query: 1 MRRFFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSL 60 M + L+ L L+ C + T+ +++ RI+ LV+HYT D+ SL Sbjct: 1 MFKKAMLLPLMLGLSAC----------SQTVSTQFRSENYNSRIRFLVMHYTTGDWQDSL 50 Query: 61 ATLTDKQVSSHYLVPAVPPRYNGKPR--IWQLVPEQELAWHAGISAWRGATRLNDTSIGI 118 LT +VSSHYL+P K +++LV EQ AWHAG+S W+G + +ND SIGI Sbjct: 51 QALTKGEVSSHYLIPEQGDASYPKSHLAVYRLVDEQHRAWHAGVSHWQGRSNINDQSIGI 110 Query: 119 ELENRGWQ-----------------KSAGVKYFAPFEPAQIQALIPLAKDIIARYH-IKP 160 EL NR + + F+ QIQ LI L+KDI+AR I P Sbjct: 111 ELINRAACAHQPQVLTEIAPSAAFFDNQTFCQYPNFDLQQIQLLIELSKDILARNPDIDP 170 Query: 161 ENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLE 220 VV H+DI K DPGP FPW L Q GIGAW + + + A + Sbjct: 171 TAVVGHSDIQLGNKQDPGPHFPWYTLYQHGIGAWYEHATASDHWQALLTEGLPTVAQVQC 230 Query: 221 LLARYGYDVKPDM-TPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKYG 274 L +YGY ++ ++ + AFQ+HF P GE +T A+ AL++KY Sbjct: 231 NLQKYGYGIEITGEFDKQTFNTVKAFQLHFLPWQATGEITIKTVAVLFALMDKYR 285 >UniRef50_Q15N79 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=4 Tax=Gammaproteobacteria RepID=Q15N79_PSEA6 Length = 818 Score = 244 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 144/289 (49%), Gaps = 28/289 (9%) Query: 2 RRFFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLA 61 +R + + + CA ++ R+K LV+H+TA D+ S+ Sbjct: 9 QRSVLICLLTVAIVSCATLPISE----------MPSKNFSHRVKFLVMHFTAIDYQKSVH 58 Query: 62 TL-TDKQVSSHYLVPAVPPRYNGKP--RIWQLVPEQELAWHAGISAWRGATRLNDTSIGI 118 L + +S+HYL+P K I +LV E + AWHAG S W+G + LND+SIGI Sbjct: 59 ALVDEGGLSAHYLIPESNDPSYPKDSLEILKLVDEDKRAWHAGNSVWQGRSELNDSSIGI 118 Query: 119 ELEN------------RGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYH-IKPENVVA 165 E+ N + F ++P QI+ LI L++ I+AR I P VV Sbjct: 119 EIVNVPECHFDKEANTTSEHGENRLCVFPDYDPKQIELLIALSQQILARNPDISPTKVVG 178 Query: 166 HADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARY 225 H+DIAP RK+DPGP FPW +L Q GIGAW + + Y + + + L Y Sbjct: 179 HSDIAPSRKNDPGPRFPWFELYQAGIGAWYENETFEAYWQRFNQYQ-PNIGLIQSALRAY 237 Query: 226 GYDV-KPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKY 273 GY+V + + + VI AFQMHF P G+AD++T A ALL+KY Sbjct: 238 GYNVLETGIRDEQTSNVISAFQMHFLPWQVTGKADSKTAAAVFALLDKY 286 >UniRef50_A4SRC8 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Aeromonas RepID=A4SRC8_AERS4 Length = 273 Score = 244 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 106/254 (41%), Positives = 147/254 (57%), Gaps = 13/254 (5%) Query: 29 YQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK--QVSSHYLVPAVPPRYNGKPR 86 YQL +R + + RI L++HYT +D SL LT+ QVS+HYL+P + Sbjct: 22 YQLSSRYPSASQNERIAFLILHYTDEDDAHSLRLLTEPAHQVSAHYLIPRDTDQTPL--P 79 Query: 87 IWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAG-----VKYFAPFEPAQ 141 ++QLVP+ + AWHAG S W LN +SIGIE+ N G+ + + P+ AQ Sbjct: 80 VYQLVPDSQRAWHAGRSRWHQYAGLNASSIGIEIVNLGYPPEDALLPAHQRRWQPYTQAQ 139 Query: 142 IQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLA-QQGIGAWPDAQRV 200 I A+ L + ++ RY I P V+AH+D+AP+RK DPGP FPW++LA G+GAWPD RV Sbjct: 140 IAAIGALTQKLVQRYRIPPTQVLAHSDVAPERKQDPGPHFPWRELALHYGVGAWPDEARV 199 Query: 201 NFYLAGRAPHTPVDTASLLELLARYGYDVK-PDMTPREQRRVIMAFQMHFRPTLYNGEAD 259 AP + + + LARYGY V + R + AFQ+HFRP L +GE D Sbjct: 200 TALRQQPAP--AWNALTWQQQLARYGYGVALSSTWDEQSRAALRAFQLHFRPALISGEPD 257 Query: 260 AETQAIAEALLEKY 273 ++QAI ALLE+Y Sbjct: 258 EQSQAILTALLERY 271 >UniRef50_Q07PU2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=33 Tax=Alphaproteobacteria RepID=Q07PU2_RHOP5 Length = 294 Score = 236 bits (603), Expect = 5e-61, Method: Composition-based stats. Identities = 87/244 (35%), Positives = 116/244 (47%), Gaps = 16/244 (6%) Query: 31 LDTRRQAQAAYPRIKVLVIHYTA-DDFDSSLATLTDKQ--VSSHYLVPAVPPRYNGKPRI 87 + ++V+HYT D + +LA L VS+HY+V RI Sbjct: 43 PSPNFGDRNKGRAPDMIVLHYTGMPDVEGALARLCQDGTEVSAHYVVLE-------DGRI 95 Query: 88 WQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIP 147 Q VPE + AWHAG++ W G +N SIGIE+ NRG + F Q+ A+I Sbjct: 96 VQCVPEAKRAWHAGLAFWAGEEDINSCSIGIEIVNRGHD-----WGYPDFPLRQVAAVIA 150 Query: 148 LAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGR 207 L + II R I+P V+AH+D+AP RK DPG FPW+ L G+G W A + + Sbjct: 151 LCRGIIIRRGIQPHRVLAHSDVAPARKQDPGEKFPWRALWDSGVGHWVPAAPIVRGDVMK 210 Query: 208 APHTPVDTASLLELLARYGYDVKPDM-TPREQRRVIMAFQMHFRPTLYNGEADAETQAIA 266 +L LA YGY + P V+ AFQ HFRP +G AD T A Sbjct: 211 LGSDGDAVLALQRALAEYGYGLTPSGHYNAATAEVVTAFQRHFRPQKVDGIADTSTLATL 270 Query: 267 EALL 270 ALL Sbjct: 271 HALL 274 >UniRef50_B0T844 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=6 Tax=Alphaproteobacteria RepID=B0T844_CAUSK Length = 243 Score = 235 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 89/257 (34%), Positives = 130/257 (50%), Gaps = 23/257 (8%) Query: 22 GIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTAD-DFDSSLATLTDKQ--VSSHYLVPAVP 78 G V+ D R+ +V+HYT +++LA + D + VS+HY+V Sbjct: 6 GFVDAPSPNFDARKSV------PDCVVLHYTGMETGEAALARMCDPEAKVSAHYMVEE-- 57 Query: 79 PRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFE 138 R+++LVPE+ AWHAG + W+G +N SIG+E+ N G + + PF Sbjct: 58 -----DGRVFRLVPEERRAWHAGAAFWKGVKDINSASIGVEIVNPGHE-----FGYRPFP 107 Query: 139 PAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQ 198 AQ+ A+I L DI +R+ I + ++ H+DIAP RK DPG LFPW++LAQ G G W + Sbjct: 108 DAQVAAVINLLADIRSRWTIDDDRILGHSDIAPGRKIDPGELFPWKRLAQAGHGLWVEPP 167 Query: 199 RVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDM-TPREQRRVIMAFQMHFRPTLYNGE 257 G+ +L L R GY+ P V+ AFQ H+ T ++G Sbjct: 168 PSPGAPLGQGEEGTG-VFALQAGLTRLGYNCPPSGNYDEWTATVVAAFQRHWLQTRFDGV 226 Query: 258 ADAETQAIAEALLEKYG 274 AD ET+A ALL G Sbjct: 227 ADGETRARLVALLRAAG 243 >UniRef50_B2IHS0 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=26 Tax=Alphaproteobacteria RepID=B2IHS0_BEII9 Length = 304 Score = 233 bits (594), Expect = 5e-60, Method: Composition-based stats. Identities = 88/262 (33%), Positives = 122/262 (46%), Gaps = 20/262 (7%) Query: 19 GEKGIVEKEGYQLDTRRQAQAAYPR----IKVLVIHYTAD-DFDSSLATLTDK--QVSSH 71 G + ++ + R +++H+TA +++L L D +VS+H Sbjct: 11 GTTPSFTGDTPLVNDVHPSPNHGDRKGRQPDAIILHHTAMVSGEAALLRLCDPAAEVSAH 70 Query: 72 YLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGV 131 YLV RI QLV E+ AWHAG S W G +N SIGIEL + G + + Sbjct: 71 YLV-------WEDGRISQLVAEKHRAWHAGQSYWAGERDMNSVSIGIELVHPGPEGGS-- 121 Query: 132 KYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGI 191 P+E AQI A I L DI+ R I V+ H DIAP RKDDP FPW QLA G+ Sbjct: 122 ---PPYEEAQIAATIALCLDIMRRRSIPAARVLGHCDIAPDRKDDPSAHFPWAQLAAAGV 178 Query: 192 GAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVK-PDMTPREQRRVIMAFQMHFR 250 G + + + +L LLA GY + ++ + V+ AFQ H+R Sbjct: 179 GLYVPPSPIVEGPRHQNGEHGQHIETLQSLLAILGYGLSITNLYGMKTEAVVRAFQRHYR 238 Query: 251 PTLYNGEADAETQAIAEALLEK 272 P L +G AD T +ALL Sbjct: 239 PALIDGIADVSTIETLKALLAA 260 >UniRef50_B6JBX5 Negative regulator of AmpC, AmpD n=3 Tax=Alphaproteobacteria RepID=B6JBX5_OLICO Length = 273 Score = 232 bits (593), Expect = 7e-60, Method: Composition-based stats. Identities = 90/261 (34%), Positives = 132/261 (50%), Gaps = 20/261 (7%) Query: 18 AGEKGIVEKEGYQLDTRRQAQAAYPR---IKVLVIHYTADDF-DSSLATLTDKQ--VSSH 71 + + + R ++++V+HYT D++LA L D + VSSH Sbjct: 19 GAMASPFTADSPLASSVMASPNLDERCAPVELIVLHYTGMPEEDAALARLCDAEAKVSSH 78 Query: 72 YLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGV 131 Y+V + QLV E++ AWHAG+S WRGA+ +N SIGIE+ N G Sbjct: 79 YVVRE-------NGEVVQLVAEEKRAWHAGVSCWRGASDINSRSIGIEIVNPGHDGDC-- 129 Query: 132 KYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGI 191 P+ QI A+I L +DI+AR I+ + V+AH+DIAP RK DPG FPW +LA +G+ Sbjct: 130 ---PPYPDPQIAAVIALCRDILARNGIRRDQVLAHSDIAPTRKQDPGEWFPWGRLAAEGV 186 Query: 192 GAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRP 251 G W + ++ A + A+ + LA YGY + P P + V+ AFQ HFRP Sbjct: 187 GLWVEPAPLD--DTSGAEADAGEAAAFIGALAGYGYGITPADPPEVKAAVVAAFQRHFRP 244 Query: 252 TLYNGEADAETQAIAEALLEK 272 +G+ D + LL Sbjct: 245 ARGDGKVDRSSIETLRRLLAA 265 >UniRef50_Q2RVT4 AmpD (Negative regulator of AmpC) n=2 Tax=Rhodospirillaceae RepID=Q2RVT4_RHORT Length = 241 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 95/263 (36%), Positives = 128/263 (48%), Gaps = 32/263 (12%) Query: 14 LAGCAGEKG--IVEKEGYQLDTRRQAQAAYPRIKVLVIHYTA-DDFDSSLATLTDKQ--V 68 +A ++E D R Q I +LVIHYT ++LA L D Q V Sbjct: 1 MASRPAPPDFPVIEALSPNADDRPPGQI----IDMLVIHYTGMPSAQAALARLLDPQAQV 56 Query: 69 SSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKS 128 S+H+L+ ++LV E+ AWHAG+SAW G +N SIGIEL N G + Sbjct: 57 SAHWLIDE-------DGTAYKLVEERRRAWHAGVSAWGGRPGVNARSIGIELVNPGHE-- 107 Query: 129 AGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQ 188 + PF AQ+ LI L + I+ R+ I +VV HAD+AP RK+DPG LF WQ+LA Sbjct: 108 ---FGYRPFPEAQMTTLIALGRGILERHPIPAAHVVGHADVAPTRKEDPGELFDWQRLAS 164 Query: 189 QGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMH 248 GIG WP L R LL + GYD+ + ++AFQ H Sbjct: 165 NGIGRWPPPP-----LGVRPETVDATEGEAACLLEQIGYDIS------SLQATVLAFQRH 213 Query: 249 FRPTLYNGEADAETQAIAEALLE 271 FRP +G D+ET + +AL Sbjct: 214 FRPKRLDGRIDSETLWLIKALAR 236 >UniRef50_C6QHF6 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QHF6_9RHIZ Length = 256 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 91/246 (36%), Positives = 123/246 (50%), Gaps = 17/246 (6%) Query: 30 QLDTRRQAQAAYPRIKVLVIHYTADDFDS-SLATLTD--KQVSSHYLVPAVPPRYNGKPR 86 ++ + + R +L++HYT ++ L VS HY++ R Sbjct: 14 RVAENHEPRRGGVRPSLLILHYTGMSSAEKAIDWLARAESNVSCHYVIDE-------DGR 66 Query: 87 IWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALI 146 I QLVPE AWHAG S WRG T +N SIGIE++N G Q + F AQ+QA+I Sbjct: 67 ITQLVPESLRAWHAGASFWRGETDINSHSIGIEIQNPGHQHG-----YPDFPAAQMQAVI 121 Query: 147 PLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAG 206 L KDI R+ + + V+AH+DIAP RK DPG F W LA+QG+G W V+ G Sbjct: 122 ALGKDIAQRHRMAADAVLAHSDIAPGRKIDPGEKFNWALLARQGLGLWVRPSSVHADDPG 181 Query: 207 RA-PHTPVDTASLLELLARYGYDVKPDM-TPREQRRVIMAFQMHFRPTLYNGEADAETQA 264 + A+ ELLA YGY V+ V+ AFQ HFRP +G D T+ Sbjct: 182 LDIGASGSRVAAAQELLALYGYRVEQSGILDDGTSHVLKAFQAHFRPRRVDGRLDRSTEL 241 Query: 265 IAEALL 270 E L+ Sbjct: 242 TLERLI 247 >UniRef50_UPI00016A62BF N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A62BF Length = 214 Score = 222 bits (567), Expect = 8e-57, Method: Composition-based stats. Identities = 112/215 (52%), Positives = 135/215 (62%), Gaps = 3/215 (1%) Query: 1 MRRFF--WLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDS 58 MR F A +LA C +V + Y DT R AQ A RI+ LV+HYT D Sbjct: 1 MRLFIRGAFCAGLCMLAACTS-PSLVGRGTYFADTSRHAQGADARIRFLVMHYTESDEAQ 59 Query: 59 SLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGI 118 SL TLT VS+HY+VPA P GKP ++QLVPE + AWHAG+SAW+GAT LN SIGI Sbjct: 60 SLRTLTGDAVSAHYVVPAQPRIEWGKPVVYQLVPEAQRAWHAGVSAWQGATELNAASIGI 119 Query: 119 ELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPG 178 E N G + + + P+ P Q+ ALI L++DI+ARY I P VV H+DIAPQRK DPG Sbjct: 120 ENVNGGPADTPQGRTWQPYPPEQVDALIRLSQDIVARYAIPPTRVVGHSDIAPQRKIDPG 179 Query: 179 PLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPV 213 P FPW+ LAQ G+GAWPD V LAGR PH V Sbjct: 180 PAFPWRALAQAGVGAWPDDATVAARLAGRDPHAAV 214 >UniRef50_B3ESH1 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ESH1_AMOA5 Length = 322 Score = 219 bits (559), Expect = 6e-56, Method: Composition-based stats. Identities = 88/270 (32%), Positives = 130/270 (48%), Gaps = 18/270 (6%) Query: 23 IVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK----QVSSHYLVPAVP 78 ++E + + I LV+HYT +F +++ T +VS+HY+V Sbjct: 53 VLEFPEEEKNRNHYGDRGTEDIAYLVMHYTVCNFPATMRLFTSDIPEGRVSAHYVVTEEE 112 Query: 79 PRYN-GKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGW-QKSAGVKYFAP 136 + ++Q+VPE++ AWHAGIS WRG LN SIG+E N+G+ K + + Sbjct: 113 RERDVQGGMVFQVVPEEKTAWHAGISYWRGEQGLNLRSIGVENVNKGFVGKESEYPNWFT 172 Query: 137 FEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLA-QQGIGAWP 195 F+ QI++L L++ I+ Y+I P+NVV HADIAP RK DPG LFPW++L G+GAW Sbjct: 173 FDKKQIRSLGTLSQYIVNSYNIAPQNVVGHADIAPTRKQDPGILFPWEKLYTHYGVGAWL 232 Query: 196 ------DAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMT-PREQRRVIMAFQMH 248 + + + A LL L YGY+ E ++ AF+ H Sbjct: 233 TEDERDEKAIAERFTPKEKLPQGISEAFLLTCLQAYGYNCTEVGYMTPENTSIVKAFKAH 292 Query: 249 F----RPTLYNGEADAETQAIAEALLEKYG 274 F P Y+ D L EKY Sbjct: 293 FSRNQYPYTYDASIDRTDMLWVWGLSEKYK 322 >UniRef50_Q4FPN2 Probable N-acetylmuramoyl-L-alanine amidase n=2 Tax=Candidatus Pelagibacter ubique RepID=Q4FPN2_PELUB Length = 247 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 79/256 (30%), Positives = 121/256 (47%), Gaps = 19/256 (7%) Query: 26 KEGYQLDTRR-QAQAAYPRIKVLVIHYTAD-DFDSSLATLT--DKQVSSHYLVPAVPPRY 81 K + +IK ++ HYT +L LT +VS HYL+ Sbjct: 4 KTILNYSPNFNPKKRTSKQIKFIIFHYTGMKSESDALKRLTEIQSEVSCHYLIKN----- 58 Query: 82 NGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQ 141 I ++VP+ +AWHAG S+W+ LN SIGIE+ N G + + F Q Sbjct: 59 --NGEIVKIVPDLYIAWHAGKSSWKNYKSLNQNSIGIEITNPGHEYG-----YKNFTQKQ 111 Query: 142 IQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVN 201 I L+ L+K +I +Y I P+N++ H+DIA RK DPG FPW+ LA+ IG W + + Sbjct: 112 ITTLVKLSKFLIKKYKINPKNILGHSDIAVLRKKDPGEKFPWEYLAKNKIGIWHTLNKQD 171 Query: 202 FYLAGRAPHTPVDTASLLELLARYGYD-VKPDMTPREQR--RVIMAFQMHFRPTLYNGEA 258 + + V+ L + GY P R + +I +FQ FR L +G+ Sbjct: 172 LLKNRKLKISKVEENIFFRNLFKIGYSKTFPKNIGRNKYLIELIKSFQRRFRQELVDGKI 231 Query: 259 DAETQAIAEALLEKYG 274 D E+ I ++L++ Y Sbjct: 232 DQESLLINKSLIKAYN 247 >UniRef50_C4SAC3 Negative regulator of beta-lactamase expression n=4 Tax=Proteobacteria RepID=C4SAC3_YERMO Length = 209 Score = 217 bits (554), Expect = 2e-55, Method: Composition-based stats. Identities = 89/191 (46%), Positives = 113/191 (59%), Gaps = 2/191 (1%) Query: 84 KPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQ 143 RI+ LV E AWHAG+S+W T LNDTSIGIE+ N K GV F P+ QI Sbjct: 16 DMRIFNLVDENARAWHAGVSSWAERTNLNDTSIGIEIVNLASDKE-GVWDFPPYPIEQIA 74 Query: 144 ALIPLAKDIIARYH-IKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNF 202 A+ LA +I+ RY I P NVVAH+DIAP RK DPGP+FPWQ+L ++GIGAW D Sbjct: 75 AVKQLAANILQRYPDITPVNVVAHSDIAPTRKSDPGPMFPWQELYEEGIGAWYDIDTKEK 134 Query: 203 YLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAET 262 ++ L+ YGYD + + ++ AFQ+HFRP+ Y+GE D ET Sbjct: 135 FIQEFTEEGLPAKDELVTHFGTYGYDASIASSEAGYQYLVRAFQLHFRPSNYDGEVDIET 194 Query: 263 QAIAEALLEKY 273 AI AL+EKY Sbjct: 195 AAILYALVEKY 205 >UniRef50_Q0BV14 Anhydro-N-acetylmuramyl-tripeptide amidase n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BV14_GRABC Length = 250 Score = 217 bits (554), Expect = 2e-55, Method: Composition-based stats. Identities = 96/258 (37%), Positives = 128/258 (49%), Gaps = 29/258 (11%) Query: 20 EKGIVEKEGYQLDTRRQAQAAYP-RIKVLVIHYTA-DDFDSSLATLTDK--QVSSHYLVP 75 I E+ D R A A P + +LV+HYT +++ L D +VSSHY+V Sbjct: 8 MPPIRERPSPNYDARPSATAGTPGAVDMLVLHYTGMTSAAAAIDRLCDPEARVSSHYVVE 67 Query: 76 AVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFA 135 +W+LV EQ AWHAGIS WRG + LND S+GIE+ N G + + Sbjct: 68 E-------DGTVWRLVWEQYRAWHAGISHWRGRSWLNDFSVGIEIVNPGHE-----WGYR 115 Query: 136 PFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWP 195 F AQ+++++ LA I+ ++ I ++VAH+DIAP RK DPG LF W+ LAQ GIG WP Sbjct: 116 AFPEAQMRSVLALAHAIVRQHSIPAAHIVAHSDIAPDRKQDPGELFDWRWLAQHGIGVWP 175 Query: 196 DAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYN 255 DA V P + L R GY T V+ AFQ F P + Sbjct: 176 DATPVK--------DRPKQENDPWDFLRRIGYR-----TDLPLDMVLRAFQRRFLPDRPD 222 Query: 256 GEADAETQAIAEALLEKY 273 G ADA T A + Y Sbjct: 223 GSADAATLARLATVAHAY 240 >UniRef50_C6XME2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XME2_HIRBI Length = 236 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 87/258 (33%), Positives = 125/258 (48%), Gaps = 33/258 (12%) Query: 22 GIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTAD-DFDSSLATLTDKQ--VSSHYLVPAVP 78 I++ D RRQ + +LV+HYT ++L + D + V++HY+V Sbjct: 7 TIIQAPSVNFDERRQPLS------MLVLHYTGMQTGQAALGRMCDPEAKVAAHYMVEE-- 58 Query: 79 PRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFE 138 RI+QLV E + AWHAG+ WRG +N SIGIE+ N G F Sbjct: 59 -----DGRIFQLVDESKRAWHAGVGTWRGLDDINSRSIGIEIVNGGHDYGL-----PDFP 108 Query: 139 PAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQ 198 QI A+I L +D+++R+ I ++V H+DIAP RKDDPG FPW++LA GIG WPD Sbjct: 109 EIQIDAVIALCRDVLSRHQILQSDIVGHSDIAPGRKDDPGEKFPWEKLAHAGIGLWPDES 168 Query: 199 RVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEA 258 + + +ELLA GY + + +E VI AFQ + GE Sbjct: 169 KKALSVGS------------VELLAEIGYGLNASPSDQEITCVIRAFQQRWMQDNVTGEP 216 Query: 259 DAETQAIAEALLEKYGQD 276 ET + Y ++ Sbjct: 217 CLETLCRVAQIASIYREN 234 >UniRef50_A3HXI6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Algoriphagus sp. PR1 RepID=A3HXI6_9SPHI Length = 299 Score = 214 bits (544), Expect = 3e-54, Method: Composition-based stats. Identities = 90/315 (28%), Positives = 129/315 (40%), Gaps = 64/315 (20%) Query: 1 MRRFFWLVAAALLLAGCAGEK---------------------GIVEKEGYQLDTRR---- 35 + F+L+ +LL+ CA KE DT Sbjct: 6 ITSAFFLICVSLLIVSCASNPYKKINKEYEKNVKDVSAAYLEIPKTKEELNYDTLSITDE 65 Query: 36 ---QAQAAYPRIKVLVIHYTADDF-DSSLATLT--DKQVSSHYLVPAVPPRYNGKPRIWQ 89 + R ++IH+TA D + ++ T T QVSSHY++ I Q Sbjct: 66 WVGTTNFSIRRPNFVIIHHTAQDSLEQTIRTFTLPRTQVSSHYVIAK-------DGTIVQ 118 Query: 90 LVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLA 149 ++ + +WHAG W T LN SIGIEL+N G F PF AQI++L+ L Sbjct: 119 MLNDYLRSWHAGRGKWGSVTDLNSVSIGIELDNNG---------FEPFPEAQIESLLILC 169 Query: 150 KDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAP 209 K + +Y I N + H+DIAP RK DP FPW QLA +G G W D V + + Sbjct: 170 KRLKWKYGIPTANFIGHSDIAPSRKVDPNRFFPWDQLAMEGYGFWYDVDEVFPVINPKDD 229 Query: 210 HTPV----------DTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRP-TLYNGEA 258 T + D+ + L GYDV I +F++HF ++ E Sbjct: 230 QTSIPLENTDTLLKDSFDPIMALRIIGYDVSVP------SNAIQSFKLHFVQGEEFSTEL 283 Query: 259 DAETQAIAEALLEKY 273 I + L +KY Sbjct: 284 TELDLRILKNLYKKY 298 >UniRef50_B6BSD7 Probable N-acetylmuramoyl-L-alanine amidase YbjR n=1 Tax=Candidatus Pelagibacter sp. HTCC7211 RepID=B6BSD7_9RICK Length = 248 Score = 212 bits (541), Expect = 8e-54, Method: Composition-based stats. Identities = 74/257 (28%), Positives = 119/257 (46%), Gaps = 17/257 (6%) Query: 20 EKGIVEKEGYQLDTRRQ-AQAAYPRIKVLVIHYTADDFDS-SLATLTDKQ--VSSHYLVP 75 + + +K ++ HYT ++ ++ LT+ + VSSHYL+ Sbjct: 1 MPKLKMNTNLNYSPNFDVKKRRVKEVKFIIFHYTGMKKENQAITRLTNSKSKVSSHYLIK 60 Query: 76 AVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFA 135 I LVP+ +AWHAGIS+W+ +N SIGIE+ N G + S + Sbjct: 61 N-------NGEILTLVPDLYVAWHAGISSWKNYKSINKYSIGIEISNPGHEYS-----YK 108 Query: 136 PFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWP 195 F Q++++I L+ +I +Y+IKP ++ H+DIAP RK DPG FPW+ L++ IG W Sbjct: 109 KFSKEQVKSIIKLSTYLIKKYNIKPNFILGHSDIAPDRKKDPGEKFPWKYLSKNKIGHWH 168 Query: 196 DAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVI-MAFQMHFRPTLY 254 + + + ++ L GY + +++ AFQ FR L Sbjct: 169 NLNEKKIFKKRNLTEGKKEKIKFIKNLYEIGYPKNILFNKYKYSKLLTTAFQRRFRQELV 228 Query: 255 NGEADAETQAIAEALLE 271 NG D E I+ L + Sbjct: 229 NGIIDQECLVISNNLAK 245 >UniRef50_A5V2C7 N-acetylmuramoyl-L-alanine amidase, family 2 n=6 Tax=Sphingomonadales RepID=A5V2C7_SPHWW Length = 241 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 96/241 (39%), Positives = 126/241 (52%), Gaps = 32/241 (13%) Query: 36 QAQAAYPR---IKVLVIHYTAD-DFDSSLATLTDKQ--VSSHYLVPAVPPRYNGKPRIWQ 89 + R I +LV+HYT D S++A LTD + VSSHYLV ++ + Sbjct: 11 PSPNHDERTLPITMLVLHYTGMADAASAIARLTDPEAKVSSHYLVAE-------DGQVMR 63 Query: 90 LVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLA 149 LVPE AWHAG S+WRG T +N SIGIE+ N G + + PF Q+ ALIPL Sbjct: 64 LVPEDRRAWHAGQSSWRGVTDVNSASIGIEIVNPGHE-----LGYRPFPKPQMDALIPLI 118 Query: 150 KDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAP 209 DI +R+ I+P NVV H+D+AP+RK DPG LF W+ L + G+ R + Sbjct: 119 SDITSRHPIEPANVVGHSDVAPRRKQDPGELFDWELLGKLGLAL-----RRPRHGLADPH 173 Query: 210 HTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEAL 269 TP L L R+GYDV ++AFQ FRP +G AD E +AI L Sbjct: 174 WTP---GGFLLALDRFGYDVSDGP------AAVIAFQRRFRPERIDGIADGECRAILLRL 224 Query: 270 L 270 L Sbjct: 225 L 225 >UniRef50_B6IRH2 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Rhodospirillum centenum SW RepID=B6IRH2_RHOCS Length = 254 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 86/254 (33%), Positives = 119/254 (46%), Gaps = 33/254 (12%) Query: 31 LDTRRQAQAAYPRIKVLVIHYTAD-DFDSSLATLTDK--QVSSHYLVPAVPPRYNGKPRI 87 + I +LV+HYT + +L L D +VS+HY++ + Sbjct: 10 PSPNHGPRRPGAAIDMLVLHYTGMRTAEEALERLCDPAAEVSAHYVIDE-------DGTL 62 Query: 88 WQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIP 147 ++LV E AWHAG+S WRG +N SIGIEL N G + PF AQ+ L Sbjct: 63 YRLVREDRRAWHAGLSFWRGERDVNSRSIGIELVNPGH-----AFGYRPFPEAQMATLES 117 Query: 148 LAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGR 207 LA D++A Y I P +V+ H+D+AP RK+DPG LF W +LA+ GIGAWP+ Sbjct: 118 LAADLVAHYRIPPLHVLGHSDVAPARKEDPGELFDWPRLARAGIGAWPEPAA-------- 169 Query: 208 APHTPVDTASLLELLARYGYD--VKPDMTPREQR------RVIMAFQMHFRPTLYNGE-- 257 A P A + LLA GY+ P +V+ AF+ H+ P +G Sbjct: 170 ADDAPWTEAEVASLLAAVGYEPLPSPGTAWDGTAWDGTAGQVLTAFRRHWHPAALSGPLR 229 Query: 258 ADAETQAIAEALLE 271 DA AL Sbjct: 230 PDAGDVCRLRALAR 243 >UniRef50_A8TR24 Negative regulator of beta-lactamase expression n=1 Tax=alpha proteobacterium BAL199 RepID=A8TR24_9PROT Length = 247 Score = 206 bits (523), Expect = 8e-52, Method: Composition-based stats. Identities = 75/260 (28%), Positives = 112/260 (43%), Gaps = 30/260 (11%) Query: 20 EKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFD-SSLATLTDK--QVSSHYLVPA 76 E ++E + I +L++HYT +L + D QVS+HYLV Sbjct: 4 EPTVIEHPSPN----HGPRPVGAPIDILLLHYTDMTRAEDALDRMCDPAAQVSAHYLVGE 59 Query: 77 VPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAP 136 R+W++V E AWHAG+S W G + +N SIGIE+ N G + P Sbjct: 60 -------DGRVWRMVAEDRRAWHAGVSWWDGDSDINSRSIGIEISNPGHSHG-----YRP 107 Query: 137 FEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPD 196 F Q+ AL L + I+AR+ I V+ H+D++P RK DPG LF W LA +GIG WP Sbjct: 108 FPDVQMSALESLCRGILARHPIPANRVLGHSDVSPGRKIDPGHLFDWHWLASRGIGLWPT 167 Query: 197 AQRVNFYLAGRAPHTPVDTASLLELLARYGYDV-KPDMTPREQRRVIMAFQMHFRPTLYN 255 + L GY + +M + + AF+ H+ P Sbjct: 168 DPAPATLQP----------EDIAAALGTIGYRIGGAEMADPAAQSALWAFRRHWCPQSLK 217 Query: 256 GEADAETQAIAEALLEKYGQ 275 D + +A+ + Sbjct: 218 HPLDRHVGGVLKAVSAAIKK 237 >UniRef50_C6XXC7 N-acetylmuramoyl-L-alanine amidase family 2 n=3 Tax=Sphingobacteriaceae RepID=C6XXC7_PEDHD Length = 276 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 81/302 (26%), Positives = 125/302 (41%), Gaps = 64/302 (21%) Query: 2 RRFFWLVAAALLLAGCAGEKGIVEKEGY---------------------------QLDTR 34 R + + + LL C+ K + Y L Sbjct: 8 RHYLYFIP-LFLLTACSTNKYAATNKVYKKQAAGFAETIKAAPPLNQGIDSLPANPLSWV 66 Query: 35 RQAQAAYPRIKVLVIHYTADDFDS-SLATLT--DKQVSSHYLVPAVPPRYNGKPRIWQLV 91 + +V+H+TA D + +L T T QVSSHY++ +++Q+V Sbjct: 67 GSVNFGIRKPNFVVLHHTAQDSSAQTLKTFTITRTQVSSHYVI-------GRDGKVFQMV 119 Query: 92 PEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKD 151 + A HAG+S W LN +SIGIE++N G + P+ QI++LI + + Sbjct: 120 NDYLRANHAGVSRWGNEMDLNSSSIGIEIDNNGKE---------PYSEVQIKSLITVLRA 170 Query: 152 IIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHT 211 + RY I N + HADIAP RK+DP FPW+++A +G G W D V Sbjct: 171 LKKRYGIPTANFIGHADIAPGRKNDP-RNFPWKRMAAEGFGFWYDDVLVM---------- 219 Query: 212 PVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLE 271 P D + L GY+V + I AF++HF T + + I + + Sbjct: 220 PPDDFDAVAALRIIGYNV------KNLNAAIEAFKIHFVQTDISQVLTPADKLILFNVYK 273 Query: 272 KY 273 KY Sbjct: 274 KY 275 >UniRef50_A5FA27 N-acetylmuramoyl-L-alanine amidase, family 2 n=2 Tax=Bacteroidetes RepID=A5FA27_FLAJ1 Length = 301 Score = 202 bits (515), Expect = 8e-51, Method: Composition-based stats. Identities = 76/235 (32%), Positives = 110/235 (46%), Gaps = 35/235 (14%) Query: 42 PRIKVLVIHYTADDF-DSSLATLT--DKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAW 98 + ++IH+TA D ++ T T QVSSHY++ ++ Q++ + AW Sbjct: 97 RKPSFVIIHHTAQDSLQQTINTFTKTRTQVSSHYIISE-------NGKVVQMLNDYLRAW 149 Query: 99 HAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHI 158 HAG S W T LN +SIGIEL+N G F PF AQI +L+ L + Y+I Sbjct: 150 HAGNSTWGKNTDLNSSSIGIELDNNG---------FKPFTEAQISSLVALLTKLKKDYNI 200 Query: 159 KPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASL 218 +N + HADIAP RK DP LFPW+ LA++G G WPDA + Sbjct: 201 PTQNFLGHADIAPGRKQDPSALFPWKTLAEKGFGIWPDA----------VLEEAPFDFKI 250 Query: 219 LELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKY 273 L GY+ + I AF++H+ T D +T ++ +K Sbjct: 251 EPALRIIGYNT------KNLSAAIQAFKLHYIQTDTTATLDRKTIDTIYSIYKKQ 299 >UniRef50_A5CBZ0 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Orientia tsutsugamushi RepID=A5CBZ0_ORITB Length = 366 Score = 197 bits (501), Expect = 3e-49, Method: Composition-based stats. Identities = 84/268 (31%), Positives = 124/268 (46%), Gaps = 27/268 (10%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK-----QVSSHYLVPAVPPRYNGKPRI 87 + IK L++HYT +F S+ T QVSSH ++ + Sbjct: 93 NHYTQRNQDTSIKYLIMHYTVCNFSSTAQEFTVNKPLLGQVSSHIVITEAEEGKTPAGIL 152 Query: 88 WQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIP 147 VPE ++A+HAG+SAW+ T LN SIGIE NRG+ K + ++ QI Sbjct: 153 ISFVPENKIAYHAGVSAWQNDTNLNSMSIGIEHVNRGFNTVNAKKEWVCYDKHQIATSGI 212 Query: 148 LAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLA-QQGIGAWPDAQR------V 200 ++ II RY+IKP +V+ H+DIA RK DPGPLFPW QL + +GAW Sbjct: 213 VSSGIIRRYNIKPIHVLGHSDIAYNRKSDPGPLFPWGQLYHEYNVGAWLTDAELNSQYIK 272 Query: 201 NFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRR----------VIMAFQMHF- 249 Y + +D + L+LL YGY + ++ + +I+AF+ HF Sbjct: 273 EKYNPKISDPDKIDDITFLKLLQEYGYHIPDNVDLNKTDNPKQTVALCAPLILAFKAHFS 332 Query: 250 ---RPTLYN-GEADAETQAIAEALLEKY 273 P L + + + + AL KY Sbjct: 333 ANQHPELCDNAQITSTDKYWIWALTAKY 360 >UniRef50_Q28T26 Negative regulator of AmpC AmpD n=39 Tax=Rhodobacterales RepID=Q28T26_JANSC Length = 227 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 79/248 (31%), Positives = 110/248 (44%), Gaps = 37/248 (14%) Query: 32 DTRRQAQAAYPRIKVLVIHYTADDF-DSSLATLTDK--QVSSHYLVPAVPPRYNGKPRIW 88 + + +++VIHYTA S+ L D +VS+HYL+ + Sbjct: 8 SPNFGPRRDGLKPELVVIHYTAMPNCASAAKVLCDPAREVSAHYLI-------GRDGDVL 60 Query: 89 QLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPL 148 LVPE AWHAG WRGA +N SIGIEL+N G PF + AL L Sbjct: 61 NLVPEDMRAWHAGKGEWRGAGDVNSRSIGIELDNDG---------LTPFSEPLMAALETL 111 Query: 149 AKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRA 208 ++A + I P+ V+ H+D+AP RK DPG F WQ+LA+QG+ W A Sbjct: 112 LPTVLAAWRIGPDGVIGHSDMAPGRKIDPGRRFDWQRLARQGLAVWSQASG--------- 162 Query: 209 PHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEA 268 VD A +GY + ++ +M FRP +G D AI Sbjct: 163 --DTVDAARFRGDAQAFGYG------DMDDTLLLDVVRMRFRPW-ASGPLDGTDCAIMAD 213 Query: 269 LLEKYGQD 276 + +YG D Sbjct: 214 IAARYGLD 221 >UniRef50_C7D9N0 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=Thalassiobium sp. R2A62 RepID=C7D9N0_9RHOB Length = 237 Score = 190 bits (483), Expect = 4e-47, Method: Composition-based stats. Identities = 78/246 (31%), Positives = 107/246 (43%), Gaps = 37/246 (15%) Query: 31 LDTRRQAQAAYPRIKVLVIHYTA-DDFDSSLATLTDK--QVSSHYLVPAVPPRYNGKPRI 87 + R ++V+HYTA +D D + L + QVSSHY+V V + Sbjct: 18 PSQNFGPRRNGLRPSLIVLHYTAMNDADGACRWLCNPESQVSSHYVVTEV-------GAV 70 Query: 88 WQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIP 147 W LV E + AWHAG W G +N SIGIE+ N G F AQ+ A+ Sbjct: 71 WSLVEEADRAWHAGAGTWGGLDDINSRSIGIEISNAGTHG---------FAAAQMDAVEA 121 Query: 148 LAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGR 207 L I+ R+ I E V+ H+D AP RK DPG F W++LA G+ W + Q+V+ Sbjct: 122 LVAGIMDRWDIPAEGVIGHSDFAPGRKIDPGGRFDWRRLALGGLAVWSEGQQVD------ 175 Query: 208 APHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAE 267 D R+GY V D ++ +M FRP G DA Sbjct: 176 -----PDWDGFRAAAVRFGYPVAQDDV------LLATMRMRFRPW-ARGPLDAVDMGRMC 223 Query: 268 ALLEKY 273 L +Y Sbjct: 224 DLAARY 229 >UniRef50_C7PRR2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PRR2_CHIPD Length = 275 Score = 189 bits (480), Expect = 8e-47, Method: Composition-based stats. Identities = 79/261 (30%), Positives = 112/261 (42%), Gaps = 38/261 (14%) Query: 19 GEKGIVEKEGYQ--LDTRRQAQAAYPRIKVLVIHYTA-DDFDSSLATLT--DKQVSSHYL 73 E V G ++ + ++IH+TA D++ T T QVS+HY+ Sbjct: 44 TEPAAVPATGAPTAVNWIGTTNFNLRKPNYVIIHHTAQGSCDTTFNTFTLPRTQVSAHYV 103 Query: 74 VPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKY 133 + I ++ + AWHAGI+ W T +N SIGIEL+N G Sbjct: 104 I-------CKDGTINHMLNDYLRAWHAGIAKWGNVTDMNSCSIGIELDNNG--------- 147 Query: 134 FAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGA 193 PF+P QI +L+ L + R++I N + H DIAP RK DP FPWQQLA++G G Sbjct: 148 LTPFQPQQINSLLVLLDSLKHRFNIPAANFIGHGDIAPGRKVDPSAWFPWQQLAEKGFGL 207 Query: 194 WPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTL 253 W + + L GYD R+ I AF+ HF PT Sbjct: 208 WYGDTSKIIIPGDFSS---------KQALRIVGYDT------RDTVAAIKAFKRHFVPTD 252 Query: 254 YN--GEADAETQAIAEALLEK 272 D + I +L+EK Sbjct: 253 TTNSTSLDEGERKILFSLMEK 273 >UniRef50_C2G1S0 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Sphingobacterium spiritivorum RepID=C2G1S0_9SPHI Length = 297 Score = 183 bits (465), Expect = 5e-45, Method: Composition-based stats. Identities = 75/246 (30%), Positives = 109/246 (44%), Gaps = 34/246 (13%) Query: 31 LDTRRQAQAAYPRIKVLVIHYTADDF-DSSLATLT--DKQVSSHYLVPAVPPRYNGKPRI 87 LD + ++IH+TA D +L T T +VS+HYL+ + Sbjct: 83 LDWVGAIHFDIRKPNYVIIHHTAQDSLKQTLRTFTLEHTKVSAHYLIGKK-------GEV 135 Query: 88 WQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIP 147 +QL+ + WHAG S W T +N S+GIEL+N G PF QI AL+ Sbjct: 136 YQLLNDYLRGWHAGASKWGSVTDMNSVSLGIELDNNG---------REPFSDVQINALLT 186 Query: 148 LAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGR 207 L + Y I N + H DIAP RK+DP FPW++LA++G G W D + + Sbjct: 187 LLDTLKTNYDIPTANFIGHGDIAPTRKNDPSIFFPWKKLAERGFGLWYDERTLM------ 240 Query: 208 APHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAE 267 TP + + ++ L GYD R I+AF+ F E +++ Sbjct: 241 ---TPPEYFNPVDALKIIGYDT------RNLSAAIVAFKRKFIVNDLRPELTLYDKSVLY 291 Query: 268 ALLEKY 273 L KY Sbjct: 292 NLYLKY 297 >UniRef50_D0CW21 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CW21_9RHOB Length = 418 Score = 182 bits (463), Expect = 9e-45, Method: Composition-based stats. Identities = 79/267 (29%), Positives = 116/267 (43%), Gaps = 34/267 (12%) Query: 3 RFFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTA-DDFDSSLA 61 R + AA A A + + + ++V+HYTA + ++L Sbjct: 176 RMATDLPAAGTPARSAVPSATELSPIWHPSPNFGPRRDGLKPSLVVLHYTAMNSARAALE 235 Query: 62 TLTDKQ--VSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIE 119 L D + VS+HYL+ +WQ+V E++ AWHAG+ W+G + +N SIGIE Sbjct: 236 RLCDPESEVSAHYLIGC-------DGTLWQMVREEDRAWHAGVGEWQGQSDINSRSIGIE 288 Query: 120 LENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGP 179 L+NRG PF AQI+ L L I+ R+ I V+ H+D+AP RK DPGP Sbjct: 289 LDNRGD---------HPFAQAQIRVLERLLPQIMTRWSIPAAGVIGHSDMAPGRKHDPGP 339 Query: 180 LFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQR 239 F W +L +QG+ A A A + + L GY E Sbjct: 340 RFDWLRLERQGLAAP---------RAHAAHLSWPEAQYFRALAQAAGYTAA---VDDET- 386 Query: 240 RVIMAFQMHFRPTLYNGEADAETQAIA 266 ++ A ++ FRP G E A Sbjct: 387 -LLAAVRLRFRPW-GRGGLAPEDVAAL 411 >UniRef50_D1WWE1 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=7 Tax=Streptomyces RepID=D1WWE1_9ACTO Length = 519 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 52/232 (22%), Positives = 86/232 (37%), Gaps = 31/232 (13%) Query: 44 IKVLVIHYTADDFDSSLATLTDK--QVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAG 101 + +VIH T + S++ + +VS+HY + + + Q V E++ AWHAG Sbjct: 236 VDKVVIHTTQGSYAGSISWYQNPASKVSAHYTIR------SSDGEVTQSVLEKDTAWHAG 289 Query: 102 ISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIK-- 159 N +S+GIE E V A + A ++ L K + ARY I Sbjct: 290 --------STNSSSVGIEHEGY-------VDNPAWYTEAMYRSSAELTKHLAARYGIPKN 334 Query: 160 PENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAW---PDAQRVNFYLAGRAPHTPVDTA 216 +++ H++ DPGP + W + G D Y ++ T Sbjct: 335 RSHIIGHSEAPGADHTDPGPNWDWNHYMELIDGEPGSGGDGLTFPTYTTQQSGSTGPQVK 394 Query: 217 SLLELLARYGY--DVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIA 266 ++ LL GY + + AFQ R +G +T Sbjct: 395 AVQTLLNAQGYQAGAADGSFGPTTKGAVQAFQRA-RALEADGTVGPKTWTAL 445 >UniRef50_Q3BNF4 N-acetylmuramoyl-L-alanine amidase n=14 Tax=Xanthomonadaceae RepID=Q3BNF4_XANC5 Length = 268 Score = 180 bits (457), Expect = 4e-44, Method: Composition-based stats. Identities = 85/276 (30%), Positives = 116/276 (42%), Gaps = 38/276 (13%) Query: 1 MRRFFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTAD-DFDSS 59 + WL AA L A G + R ++V+H+T S Sbjct: 7 LSSSAWLRAAVCLAALSLGACAHAPQRNPLAQWVPSPNYDTRRPILIVLHFTDQQSVRQS 66 Query: 60 LATLTDK----QVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTS 115 L+TL + +VS+HYL+ + +QLV + + AWH G W T +N S Sbjct: 67 LSTLRGRNSGGRVSAHYLIGE-------DGQRYQLVSDGQRAWHGGAGRWGTITDINSAS 119 Query: 116 IGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKD 175 IGIEL+N G + PF PAQI +L+ L D+ R I +V H D+AP RK+ Sbjct: 120 IGIELDNDGSE---------PFAPAQIDSLLVLLDDLCQRLRIPRTQIVGHEDVAPTRKN 170 Query: 176 DPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTP 235 DPGPLFPW++LA G G WP A + LA GY + Sbjct: 171 DPGPLFPWKRLADAGFGRWPAADAPAAPEG----------FDPWQALALIGYSI------ 214 Query: 236 REQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLE 271 + + AF H+R DAE I AL Sbjct: 215 DDPAATLQAFHHHYRGNSAT-TLDAEDLRILSALTH 249 >UniRef50_Q0F4W8 N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0F4W8_9RHOB Length = 238 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 72/246 (29%), Positives = 107/246 (43%), Gaps = 30/246 (12%) Query: 29 YQLDTRRQAQAAYPRIKVLVIHYTAD-DFDSSLATLTDK--QVSSHYLVPAVPPRYNGKP 85 Q + ++V+HYTA ++ L+D +VS+HYL+ Sbjct: 9 QQPSPNFGIRRGGVIPSMIVLHYTAMKSSKDAIQRLSDPKSEVSAHYLIDEA-------G 61 Query: 86 RIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQAL 145 ++ QLV EQ+ AWHAG W +N SIGIEL+ K F+ QI +L Sbjct: 62 KVTQLVDEQKRAWHAGQGCWGEINDINSYSIGIELDYCPSAKCN-------FDERQISSL 114 Query: 146 IPLAKDIIARY-HIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYL 204 L DI+ R I+PE ++AH+D+AP RK DPG FPW++L+Q+G+ WP+ Sbjct: 115 EKLLFDILKRRSEIRPEFIIAHSDMAPGRKFDPGMYFPWKKLSQKGLSIWPEN------- 167 Query: 205 AGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQA 264 D R+GY D V+ F++ F P G+ Sbjct: 168 ---ILDLAADWGKFKYHAERFGYRASCDTFG-GWTDVLDVFRLRFLPKQ-EGKLSPVDMG 222 Query: 265 IAEALL 270 + L Sbjct: 223 VITYLS 228 >UniRef50_B9NMR2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NMR2_9RHOB Length = 227 Score = 174 bits (440), Expect = 3e-42, Method: Composition-based stats. Identities = 70/235 (29%), Positives = 102/235 (43%), Gaps = 33/235 (14%) Query: 21 KGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTAD-DFDSSLATLTDK--QVSSHYLVPAV 77 + + + ++V+HYTA D +L L D +VS+HYL+ Sbjct: 3 SITERPPIWHPSPNFGPRRDGLKPTLIVLHYTAMHSADDALERLCDPAHEVSAHYLI--- 59 Query: 78 PPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPF 137 +WQLV E + AWHAG W G T +N SIGIEL+N G PF Sbjct: 60 ----GRDGTLWQLVHEPDRAWHAGAGEWHGQTDINSRSIGIELDNAG---------THPF 106 Query: 138 EPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDA 197 Q+ AL L DI+ R++I P+ V+ H+D+AP RK DPGP F WQ+L +Q + A Sbjct: 107 AAPQMSALDHLLPDIMGRWNIPPQGVIGHSDMAPGRKIDPGPKFDWQRLERQNLAA---- 162 Query: 198 QRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPT 252 +L G+ E ++ A ++ +RP Sbjct: 163 -----RRGYDDGPRKASPDLFRKLARAAGFSAN---VDDET--LLAAVRLRYRPW 207 >UniRef50_Q1DDM5 N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DDM5_MYXXD Length = 203 Score = 169 bits (428), Expect = 9e-41, Method: Composition-based stats. Identities = 53/176 (30%), Positives = 89/176 (50%), Gaps = 25/176 (14%) Query: 19 GEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTA-DDFDSSLATLTDKQ--VSSHYLVP 75 + ++ ++R +I +V+H+TA ++ L+ + + Q VS+HY+V Sbjct: 44 TKPAVINAPSPNQNSR-----GGTKIDTIVMHHTATNNGAGDLSWMRNPQSKVSAHYMVD 98 Query: 76 AVPPRYNGKPRIWQLVPEQELAWHAGISAWRGA-TRLNDTSIGIELENRGWQKSAGVKYF 134 +I+QLV + + AWHAG G + +N+ SIGIE+ N G K Sbjct: 99 -------RDGKIYQLVGDDKRAWHAGKGELHGVPSDINNRSIGIEIVNDGSGK------- 144 Query: 135 APFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAP--QRKDDPGPLFPWQQLAQ 188 PF AQ ++L L + +++I +N+V HAD+A RK+DP P F W +L + Sbjct: 145 TPFTEAQYKSLTQLTGYLKQQHNIPMKNIVGHADVAVPKGRKNDPAPNFDWNRLRK 200 >UniRef50_UPI0001793312 PREDICTED: hypothetical protein n=1 Tax=Acyrthosiphon pisum RepID=UPI0001793312 Length = 276 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 81/259 (31%), Positives = 125/259 (48%), Gaps = 26/259 (10%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLATLTD------KQVSSHYLVPAVPPRYNGKPR 86 + +IK++V+H+T DF +++ T + VSSHY++ P + Sbjct: 26 NHFYHKNVNNKIKIIVLHFTGIDFGATVKEFTSKRSNTSRNVSSHYVIAR-PTEAGTHNQ 84 Query: 87 IWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALI 146 + Q+VPE +++HAGIS W + +N SIGIE+ N G+ + + PF QI + Sbjct: 85 LLQVVPENYVSYHAGISLWGNYSSINSISIGIEIVNYGYNATN--DSWDPFYQDQISIVG 142 Query: 147 PLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQ-QGIGAWPDAQR------ 199 + ++ +Y + P NVV H+DIAP RK DPG +FPW QL + GIGAW D Sbjct: 143 LMVARMVNQYKVLPHNVVGHSDIAPNRKIDPGVMFPWSQLYKNYGIGAWLDDDEMNETVI 202 Query: 200 VNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHF----RPTLYN 255 ++ Y D + L YGY++ ++ + I AF+ HF +P LYN Sbjct: 203 ISKYSPSTPCPCTPDQKLFVNYLGVYGYNISDEI------KAIKAFKAHFTANQKPKLYN 256 Query: 256 GEADAETQAIAEALLEKYG 274 AL+ KY Sbjct: 257 SLITRLEMYWIWALVAKYS 275 >UniRef50_A3VV46 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VV46_9PROT Length = 238 Score = 167 bits (422), Expect = 4e-40, Method: Composition-based stats. Identities = 72/242 (29%), Positives = 103/242 (42%), Gaps = 32/242 (13%) Query: 31 LDTRRQAQAAYPRIKVLVIHYTA-DDFDSSLATLTDK--QVSSHYLVPAVPPRYNGKPRI 87 ++ P I ++V+HYT + +L L D VSSHY + RI Sbjct: 9 PSPNYSSREGTP-ITLVVLHYTGMPSAEEALDRLRDPEAGVSSHYFI-------EQDGRI 60 Query: 88 WQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIP 147 +LV E++ A HAG+ AW +N SIGIE+ N+G + + F QI ALI Sbjct: 61 VRLVDEKDRAHHAGLGAWGPVRDVNSASIGIEIVNKGH-----LWGYEDFPDLQIDALIG 115 Query: 148 LAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLA--QQGIGAWPDAQRVNFYLA 205 L +I R+ + P +AH+D+AP RKDDPG FPW +LA + IG W + Sbjct: 116 LMTEIYRRHRLGPLAAIAHSDLAPARKDDPGERFPWDRLAASRLAIGQWHPGEDPPPPDY 175 Query: 206 GRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAI 265 + L GY + ++AFQ F P L T+ Sbjct: 176 DDSLTQ----------LTEIGYGLDRSFPVP----AVLAFQRRFAPRLLGQALSPATRQA 221 Query: 266 AE 267 Sbjct: 222 IR 223 >UniRef50_Q2NVA7 Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NVA7_SODGM Length = 201 Score = 167 bits (422), Expect = 5e-40, Method: Composition-based stats. Identities = 78/226 (34%), Positives = 102/226 (45%), Gaps = 35/226 (15%) Query: 32 DTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLV 91 + R + R++ L++HYTA DF S+ L+ Sbjct: 7 TSYRSVKGFNSRVRFLIMHYTAVDFAGSVRALSSD------------------------- 41 Query: 92 PEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKD 151 A SAW G LNDTSIGIE N K+ G F P+ P QI A+I LA+D Sbjct: 42 --------AAFSAWAGRNNLNDTSIGIENVNLASVKN-GKLIFPPYHPVQIAAIIQLAQD 92 Query: 152 IIARYH-IKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPH 210 I+ RY I P ++ H+D+AP RK DPG FPWQ L GIGAW D +YL A Sbjct: 93 ILQRYPDITPTQIIGHSDVAPGRKFDPGAAFPWQTLFTAGIGAWFDEATKQYYLDEFAGQ 152 Query: 211 TPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNG 256 D A+++ L YGY+ + +I AF F P G Sbjct: 153 GLPDQAAIIGKLKAYGYNTSGATDASVYKNLIQAFPTAFPPRRLAG 198 >UniRef50_Q093H8 Negative regulator of beta-lactamase expression n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q093H8_STIAU Length = 280 Score = 163 bits (413), Expect = 5e-39, Method: Composition-based stats. Identities = 52/179 (29%), Positives = 80/179 (44%), Gaps = 25/179 (13%) Query: 15 AGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTA-DDFDSSLATLTDK--QVSSH 71 G + + + R I +V+H+TA ++ LA + + +VS+H Sbjct: 117 PGSFTKPPVTSAPSPNFNER-----GGKDIDTIVLHHTASNNGAGDLAHMRNPASEVSAH 171 Query: 72 YLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGA-TRLNDTSIGIELENRGWQKSAG 130 Y+V +I+QLV + + AWHAG S G T +N SIGIE+ N G K Sbjct: 172 YMVD-------RDGKIYQLVNDSKRAWHAGKSELHGVPTDVNSRSIGIEIVNDGSGK--- 221 Query: 131 VKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAP--QRKDDPGPLFPWQQLA 187 F AQ ++L L + + + N+V H D+A RK+DP F W +L Sbjct: 222 ----TAFTEAQYKSLTQLVGYLKQEHGVPMNNIVGHKDVAVPKGRKNDPASNFDWNRLR 276 >UniRef50_D2AU78 N-acetylmuramoyl-L-alanine amidase n=5 Tax=Bacteria RepID=D2AU78_STRRD Length = 508 Score = 156 bits (395), Expect = 7e-37, Method: Composition-based stats. Identities = 47/235 (20%), Positives = 80/235 (34%), Gaps = 32/235 (13%) Query: 14 LAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK--QVSSH 71 LA G + + I +VIH T + +++ + QVS+H Sbjct: 208 LAAAVDYPGAKWVAASSSNYTVSNRPTSNAIDRIVIHVTQGSYAGTISWFQNPAAQVSAH 267 Query: 72 YLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGV 131 Y+V + + Q+V E++ AWHA N S+GIE E V Sbjct: 268 YVVR------SSDGDVTQMVREKDRAWHA--------RDWNSRSVGIEHEGY-------V 306 Query: 132 KYFAPFEPAQIQALIPLAKDIIARYHIKPE--NVVAHADIAPQRKDDPGPLFPWQQLAQQ 189 + F A ++ L ++I RY I + ++V H ++ DPGP + W + Q Sbjct: 307 NDASWFTDAMYRSSAALTRNIADRYGIPKDRAHIVGHVEVPGNDHTDPGPNWDWTRYMQY 366 Query: 190 GIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMA 244 G + +T + Y + + A Sbjct: 367 VNG-------TTTTWSTIVDNTTAGRFTASANWGTSTYSGQRYGADYRYAEPVTA 414 >UniRef50_Q4ZY97 N-acetylmuramoyl-L-alanine amidase, family 2 n=14 Tax=Gammaproteobacteria RepID=Q4ZY97_PSEU2 Length = 182 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 54/198 (27%), Positives = 80/198 (40%), Gaps = 42/198 (21%) Query: 15 AGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTA--------------------D 54 + G+ + R + I +LVIH + Sbjct: 5 SASGWCDGVQHCPSPNFNARPEG-----EISLLVIHNISLPPAQFKTGKVQAFFQNQLDI 59 Query: 55 DFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDT 114 D + D +VS+H+L+ + Q V + AWHAG+S+++G ND Sbjct: 60 DEHPYFVGIADLRVSAHFLI-------ERDGEVIQFVSCLDRAWHAGVSSFQGREGCNDF 112 Query: 115 SIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYH-IKPENVVAHADIAPQR 173 S+GIELE Q PF AQ ALI L + + + I PE + H+D+AP R Sbjct: 113 SVGIELEGTDDQ---------PFTDAQYDALIDLTRQLRQAFEAITPERICGHSDVAPGR 163 Query: 174 KDDPGPLFPWQQLAQQGI 191 K DPGP F W + + Sbjct: 164 KTDPGPCFDWARFRAALL 181 >UniRef50_A8PNB6 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=Rickettsiella grylli RepID=A8PNB6_9COXI Length = 406 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 15/154 (9%) Query: 134 FAPFEPAQIQALIPLAKDIIA-------------RYHIKPENVVAHADIAPQRKDDPGPL 180 + + Q L+ L ++ I Y I P+ ++ H+D+AP RK DPGP Sbjct: 208 WDDYTDHQYDTLVKLIEENIKPAMAIIDEESEHSYYQIPPQFILGHSDVAPGRKIDPGPR 267 Query: 181 FPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDM-TPREQR 239 W++LA++ IGAWPD V +D + + L YGYD+ + + Sbjct: 268 L-WKKLAERNIGAWPDEAEVCAIEQAITLEHGIDYKWIQDALGHYGYDINSTGQFDEQTQ 326 Query: 240 RVIMAFQMHFRPTLYNGEADAETQAIAEALLEKY 273 VI +FQMHF P Y+G T ++ EALL+KY Sbjct: 327 NVIRSFQMHFEPENYSGTPSVRTISLLEALLKKY 360 Score = 104 bits (260), Expect = 3e-21, Method: Composition-based stats. Identities = 43/123 (34%), Positives = 68/123 (55%), Gaps = 5/123 (4%) Query: 37 AQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKP-RIWQLVPEQE 95 + R + +V+HYTA D SL TLT +S+H+LVP P + + + ++LV + Sbjct: 10 KRNFDKRQRFIVLHYTAFDEKDSLETLTRGGLSAHFLVPKQPFKVDEESYDYYKLVDIND 69 Query: 96 LAWHAGISAWRGATRLNDTSIGIELENRGWQ--KSAGVKYFAPFEPAQIQALIPLAKDII 153 AWHAG S ++G LND SIGIE+ N G+ + +G F AQ++ I + + Sbjct: 70 RAWHAGCSHFKGRESLNDNSIGIEIVNYGFGLVQDSGEIVFTYQIEAQLKTFI--VETLK 127 Query: 154 ARY 156 A++ Sbjct: 128 AQH 130 >UniRef50_B8GD95 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=3 Tax=Chloroflexus RepID=B8GD95_CHLAD Length = 641 Score = 153 bits (386), Expect = 7e-36, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 93/200 (46%), Gaps = 25/200 (12%) Query: 33 TRRQAQAAYP-RIKVLVIHYTADDFDSSLATLTD-----KQVSSHYLVPAVPPRYNGKPR 86 TR Q P RI+++V+H TA + L ++VS HY + + + Sbjct: 10 TRNNFQPGSPDRIRMIVLHATAGSYPGDFKWLRQGGAPGREVSVHYYITK-------RGQ 62 Query: 87 IWQLVPEQELAWHAGISAW----RGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQI 142 I+QLV + ++AWHAG+S W R N+ S+GIELENR + P+ P Q Sbjct: 63 IFQLVADHDIAWHAGVSRWEVDGRTVYGCNEVSLGIELENRNDGRD-------PYPPEQY 115 Query: 143 QALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNF 202 A + L ++++ +YHI P VV H DI+P RK DP FPWQQ + A + Sbjct: 116 AAALWLVRELVQKYHIPPNQVVRHLDISPGRKTDP-AGFPWQQFLDEVFADLTAAPSLPV 174 Query: 203 YLAGRAPHTPVDTASLLELL 222 R + + L Sbjct: 175 GDRLRQYMLDIAYRAAGSGL 194 >UniRef50_A5UR54 N-acetylmuramoyl-L-alanine amidase, family 2 n=2 Tax=Roseiflexus RepID=A5UR54_ROSS1 Length = 419 Score = 153 bits (386), Expect = 7e-36, Method: Composition-based stats. Identities = 70/218 (32%), Positives = 104/218 (47%), Gaps = 26/218 (11%) Query: 26 KEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK--QVSSHYLVPAVPPRYNG 83 + + I ++VIH TA S+LA LT+ +VS+HYL+ Sbjct: 4 AINTSIRSPNYGSRNGRSISMIVIHATAGTVRSALAWLTNPASRVSAHYLIDKA------ 57 Query: 84 KPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQ 143 +I++LVP++ AWHAG +AWRG T +ND S+GIELEN + P+ Q++ Sbjct: 58 -GQIYRLVPDEYAAWHAGRAAWRGETAINDISLGIELENANNGRD-------PYPATQME 109 Query: 144 ALIPLAKDIIARYHIKPENVVAHADIA--PQRKDDPGPLFPWQQLAQQGIGAWPDAQRVN 201 +L+ L +D +A+Y I P+ VV H DIA RK DP FPW +Q DA + Sbjct: 110 SLVQLTRDKVAQYRIAPDMVVRHLDIAIPRGRKSDP-AGFPWNDFLRQVFAEPIDALPEH 168 Query: 202 FYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQR 239 PV A+L ++L Y + + Sbjct: 169 PIP-------PVRYATLSQMLLHEAYRQVGAVEWSDWT 199 >UniRef50_A4W6L1 N-acetylmuramoyl-L-alanine amidase, family 2 n=36 Tax=Proteobacteria RepID=A4W6L1_ENT38 Length = 187 Score = 153 bits (386), Expect = 8e-36, Method: Composition-based stats. Identities = 51/160 (31%), Positives = 71/160 (44%), Gaps = 16/160 (10%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVP 92 + + P I L + A + +VS+H L+ I Q VP Sbjct: 37 SLPPGEFGGPWIDALFTGTIDPNAHPFFAEIAHLRVSAHCLIR-------RDGEIVQYVP 89 Query: 93 EQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDI 152 + AWHAG+S++ G + ND SIGIELE P+ AQ QAL + + + Sbjct: 90 FDKRAWHAGVSSYCGREKCNDFSIGIELEGTD---------TTPYTDAQYQALCAVTRKL 140 Query: 153 IARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIG 192 IA Y +N+ H+DIAP RK DPGP F W + Sbjct: 141 IACYPTISDNITGHSDIAPVRKTDPGPAFDWSRFRAMLTA 180 >UniRef50_D1SAT8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1SAT8_9ACTO Length = 516 Score = 151 bits (382), Expect = 2e-35, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 76/224 (33%), Gaps = 30/224 (13%) Query: 25 EKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQV--SSHYLVPAVPPRYN 82 Y + +R A I +VIH + S++ + S+HYL + Sbjct: 225 NSSNYTVSSRESAYP----INYIVIHTMQGSYAGSISWFQNAAAGTSAHYL------LRS 274 Query: 83 GKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQI 142 + Q+V ++++AWHAG + N SIGIE E V + + A Sbjct: 275 SDGAVTQMVRDKDIAWHAGNWTY------NTQSIGIEHEGY-------VDSASWYTDAMY 321 Query: 143 QALIPLAKDIIARYHIK--PENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRV 200 ++ L + + +Y I N++ H + DPGP + W Q G Sbjct: 322 RSSAALTRFLCDKYGIPKTRNNIIGHNQVPGATHTDPGPNWNWTYYMQLVTGG---TTPP 378 Query: 201 NFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMA 244 + +T + + Y + + A Sbjct: 379 PTTWSTVVDNTTAGRFTASANWSTSTYSAQRYGADYRYANPVAA 422 >UniRef50_B3SF77 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3SF77_TRIAD Length = 232 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 67/234 (28%), Positives = 102/234 (43%), Gaps = 21/234 (8%) Query: 56 FDSSLATLT-DKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDT 114 F S LT +VSSH+L+ I QLVP + AWHAG S W G +N Sbjct: 3 FKDSYNILTKSDKVSSHFLISEK-------GDIHQLVPLEFKAWHAGESFWSGKNDINQY 55 Query: 115 SIGIELENRGW-----QKSAGVKYFAPFEPAQIQALIPLAKDIIARYH-IKPENVVAHAD 168 SIGIE+ N+G V F AL L ++ Y I+ +N++ H+D Sbjct: 56 SIGIEIVNKGMKLKFLNNKVQVLNINTFSNNIYFALAKLICELKKMYPKIQDKNIIGHSD 115 Query: 169 IAPQ--RKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRA-PHTPVDTASLLELLARY 225 I + RK DPG F W+ L G G + + ++ + + L + L + Sbjct: 116 ITAKNLRKIDPGIAFDWKFLNILGHGIYHEIEKRDNNKIIFKLGDKGQNIELLQKKLKKL 175 Query: 226 GYDVKPDM-TPREQRRVIMAFQMHFRP--TLYNGEADAETQAI-AEALLEKYGQ 275 GY++ + + VI AF +H+ + N + + I +E +LEK Q Sbjct: 176 GYEINYNGLFDKHLANVIFAFNLHYLQHLNITNSQINYGIWDINSEKVLEKITQ 229 >UniRef50_A4TAY9 Peptidoglycan-binding domain 1 protein n=5 Tax=root RepID=A4TAY9_MYCGI Length = 288 Score = 150 bits (379), Expect = 5e-35, Method: Composition-based stats. Identities = 55/273 (20%), Positives = 87/273 (31%), Gaps = 32/273 (11%) Query: 15 AGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLV 74 A +VE G+ R + + I+ +++H+T D S+ + + + Sbjct: 17 VLRAEGLDVVEFPGW----RNRGHGDFKDIRGVMVHHTGSDTASAESIARGRPDLA---G 69 Query: 75 PAVPPRYNGKPRIWQLVPEQELAWHAGISA--WRGATRLNDTSIGIELENRGWQKSAGVK 132 P + V +AWHAG+ W A N +IGIE N G + Sbjct: 70 PLSQLHIARDGTVT--VVAAGVAWHAGVGMYPWLPANMGNWHTIGIECANSGTSPT--AP 125 Query: 133 YFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAP--QRKDDPGPLFPWQQLAQQG 190 + + AQ ALI I R + + H + A Q K DPG +L + Sbjct: 126 HRRNWPDAQYAALIGCCAAICRRLGVPATRTIGHKEYAGRAQGKWDPGG-IDMDRLRRDV 184 Query: 191 ------IGAWPDAQRVNFYLA-----GRAPHTPVDTASLLELL----ARYGYDVKPDM-T 234 +G P + A L L A Y D++ D Sbjct: 185 AARIGSVGGGPRPRPTVPVGEYAEVLLYRGSRGPQVAELQRRLKHAYAAYAGDLRIDGVY 244 Query: 235 PREQRRVIMAFQMHFRPTLYNGEADAETQAIAE 267 + + FQ +G T A Sbjct: 245 GPDTEAAVREFQRRTAGLKVDGVVGPATAAALR 277 >UniRef50_B4RX52 N-acetylmuramoyl-L-alanine amidase, putative n=2 Tax=Alteromonas macleodii RepID=B4RX52_ALTMD Length = 315 Score = 150 bits (378), Expect = 5e-35, Method: Composition-based stats. Identities = 59/197 (29%), Positives = 83/197 (42%), Gaps = 39/197 (19%) Query: 25 EKEGYQLDTRRQAQAAYPRIKVLVIHYTADDF-DSSLATLTD--KQVSSHYLVPAVPPRY 81 E + +VIH+TA DSS+ LT+ VS+H+ Sbjct: 22 ENVKFTASPNTSGAFQTGAPDTIVIHFTAGSSLDSSVNVLTNAESGVSAHF-------AL 74 Query: 82 NGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAG----------- 130 I Q++P ++ WHAG S ++G + LN SIGIEL+N G K G Sbjct: 75 GRNGDIVQMLPTNKIGWHAGKSHYKGRSGLNRYSIGIELDNAGQLKPRGDGTYESWFGNV 134 Query: 131 ----------------VKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRK 174 + Y+ + QI + I L K + Y I VV H +IAP RK Sbjct: 135 YRESEVIAAQHPNQSVLGYWHKYTDIQIASTISLCKVLCEHYPISV--VVGHDEIAPSRK 192 Query: 175 DDPGPLFPWQQLAQQGI 191 DPGP FP Q+ +Q + Sbjct: 193 VDPGPAFPMHQIREQVL 209 >UniRef50_Q46X31 N-acetylmuramoyl-L-alanine amidase, family 2 n=13 Tax=Proteobacteria RepID=Q46X31_RALEJ Length = 203 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 55/201 (27%), Positives = 75/201 (37%), Gaps = 42/201 (20%) Query: 7 LVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTA------------- 53 + A+ L D R + ++V+H + Sbjct: 8 PIPASFLPDAEGWVPAARRVPSPNFDERPAGMP----VDLVVLHNISLPPGQFGSGDIEA 63 Query: 54 -------DDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWR 106 D AT+ QVS+H+LV + Q VP + AWHAG S + Sbjct: 64 FFQNRLDPDRHPFFATIHQVQVSAHFLVR-------RDGELVQFVPCTKRAWHAGQSDFF 116 Query: 107 GATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAH 166 G +R ND S+GIE+E PF AQ L K + A + V H Sbjct: 117 GRSRCNDFSVGIEIEGTDD---------LPFTAAQYTTTSTLVKALRAT--LPVRAVAGH 165 Query: 167 ADIAPQRKDDPGPLFPWQQLA 187 +DIAP RK DPGP F W + A Sbjct: 166 SDIAPGRKTDPGPHFDWDRFA 186 >UniRef50_D2AQX4 Negative regulator of beta-lactamase expression-like protein n=4 Tax=Actinomycetales RepID=D2AQX4_STRRD Length = 467 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 72/169 (42%), Gaps = 23/169 (13%) Query: 36 QAQAAYPRIKVLVIHYTADDFDSSLATLTDKQ--VSSHYLVPAVPPRYNGKPRIWQLVPE 93 ++ + I +VIH T + +++ + VS+HY+V + + Q+V + Sbjct: 229 SSRPSAYAIDRIVIHVTQGSYAGTISWFQNPSASVSAHYVVR------SSDGAVTQMVRD 282 Query: 94 QELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDII 153 +++AWHAG ++ N S+GIE E V + F A ++ L + I Sbjct: 283 KDVAWHAGNWSY------NTRSVGIEHEGY-------VSDASWFTDAMYRSSAALTRHIA 329 Query: 154 ARYHIKPE--NVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRV 200 RY I + +++ H + DPGP + W + Q G A Sbjct: 330 DRYGIPKDRAHIIGHNQVPGATHTDPGPYWDWNRYMQYVTGGSNPAPGK 378 >UniRef50_C7RNH8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=55 Tax=Proteobacteria RepID=C7RNH8_9PROT Length = 195 Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 56/180 (31%), Positives = 79/180 (43%), Gaps = 38/180 (21%) Query: 31 LDTRRQAQAAYPRIKVLVIHYTADD--------------------FDSSLATLTDKQVSS 70 + R + + ++VIH + A + +VS+ Sbjct: 24 VSPNRDPRPPGEVVSMIVIHAISLPPARFGGDGIARLFTNRLDPAAHPYFAQIIGLRVSA 83 Query: 71 HYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAG 130 H+LV + Q V +E AWHAG+SAW+G ND S+GIELE Sbjct: 84 HFLVR-------RDGELIQFVSCRERAWHAGLSAWKGRQGCNDFSLGIELEGCDE----- 131 Query: 131 VKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQG 190 +PFE AQ L+ L + A Y I + VV H+DI+P RK DPGP F W++L G Sbjct: 132 ----SPFEDAQYSCLLALVGRLCAGYPI--DAVVGHSDISPGRKTDPGPCFDWRRLGSIG 185 >UniRef50_C8PWQ1 Protein AmpD n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PWQ1_9GAMM Length = 219 Score = 147 bits (372), Expect = 3e-34, Method: Composition-based stats. Identities = 52/212 (24%), Positives = 81/212 (38%), Gaps = 42/212 (19%) Query: 5 FWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADD--------- 55 W++ ++++G + E+G++ + + I ++VIH + Sbjct: 12 IWMIGRGMVMSGFSIEQGLLSPCEFVASPNFGQRPDPNDIHLIVIHNISLPPSEFGLKNN 71 Query: 56 -----------------FDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAW 98 AT+ +QVS+H + I Q V AW Sbjct: 72 QGEHFVRAFFQNQLDPKAHPYFATIYQQQVSAHLFI-------ERDGSITQFVSFDARAW 124 Query: 99 HAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHI 158 HAG S++ G ND SIGIELE + + F+ Q QAL + I Y Sbjct: 125 HAGKSSYLGVPNCNDYSIGIELEGDDYSE---------FDDRQYQALSGVIAAIYQAYPK 175 Query: 159 KPENVVAHADIAPQRKDDPGPLFPWQQLAQQG 190 ++ H+DIA RK DPG F W +L Sbjct: 176 TVNHLAGHSDIARGRKSDPGLYFDWVKLRNMV 207 >UniRef50_D2BEW5 Negative regulator of beta-lactamase expression-like protein n=2 Tax=Streptosporangium roseum DSM 43021 RepID=D2BEW5_STRRD Length = 480 Score = 147 bits (372), Expect = 3e-34, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 70/181 (38%), Gaps = 25/181 (13%) Query: 14 LAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK--QVSSH 71 A + ++ + I +VIH T + +++ + QVS+H Sbjct: 205 AAAAVDYPSAHWAPANSGNYAVSSRPSGDVIDRIVIHVTQGSYAGTISWFQNPAAQVSAH 264 Query: 72 YLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGV 131 Y+V + + Q+V E+ A+HAG N S+GIE E V Sbjct: 265 YVVR------SSDGDVTQMVREKNRAFHAG--------SFNRRSVGIEHEGY-------V 303 Query: 132 KYFAPFEPAQIQALIPLAKDIIARYHIKPE--NVVAHADIAPQRKDDPGPLFPWQQLAQQ 189 + F A ++ L ++I RY I + ++V H + DPGP + W + Q Sbjct: 304 DNASWFTDAMYRSSAALTRNIADRYGIPKDRAHIVGHHQVPGTDHTDPGPNWNWTKYMQF 363 Query: 190 G 190 Sbjct: 364 V 364 >UniRef50_Q12NJ5 N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Shewanella denitrificans OS217 RepID=Q12NJ5_SHEDO Length = 272 Score = 147 bits (370), Expect = 5e-34, Method: Composition-based stats. Identities = 52/195 (26%), Positives = 78/195 (40%), Gaps = 38/195 (19%) Query: 26 KEGYQLDTRRQAQAAYPRIKVLVIHYTADD-FDSSLATLTDKQV--SSHYLVPAVPPRYN 82 K+ + + +VIHYT ++ L + Q S+H ++ Sbjct: 8 KDIPFYASPNVGEVMIAPPSAVVIHYTGGSTLAGAVEWLINPQAKASAHVVIGEA----- 62 Query: 83 GKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKY--------- 133 I QLVP ++AWHAG S ++G + N SIGIEL N G G ++ Sbjct: 63 --GDIVQLVPFNQVAWHAGKSHYQGRSNFNRFSIGIELVNPGQLTLVGQQHCAWFGDPYP 120 Query: 134 -----------------FAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDD 176 + + AQI A+ L + Y I +V H +I+P RK D Sbjct: 121 QERVVKIPQKDSIQEAVWCAYTQAQIIAVKRLLLMLKEYYPINL--LVGHDEISPGRKRD 178 Query: 177 PGPLFPWQQLAQQGI 191 PGP FP L + + Sbjct: 179 PGPAFPMAPLRRTVL 193 >UniRef50_A5WCS6 N-acetylmuramoyl-L-alanine amidase, family 2 n=3 Tax=Psychrobacter RepID=A5WCS6_PSYWF Length = 206 Score = 146 bits (369), Expect = 7e-34, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 70/197 (35%), Gaps = 42/197 (21%) Query: 20 EKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTAD------------------------- 54 E G++ + + + I +VIH + Sbjct: 20 ESGLLTQADWLPSPNYNQRPESCEISAIVIHNISLPPNEFGQTNKQGLHYVKALFTNTLD 79 Query: 55 -DFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLND 113 D ++ +VS+H + +I QLV + AWHAG S++ G ND Sbjct: 80 WDAHPYFKSIEGMEVSAHLFI-------ERSGQITQLVNFENRAWHAGRSSYLGRPECND 132 Query: 114 TSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQR 173 SIGIELE F F Q AL + I Y ++ H+DIAP R Sbjct: 133 YSIGIELEGSD---------FQAFTAEQYTALSSVIAAIYKAYPKTRRHLTGHSDIAPGR 183 Query: 174 KDDPGPLFPWQQLAQQG 190 K DPG F W L Sbjct: 184 KTDPGEYFEWDTLRDLV 200 >UniRef50_B5JVS6 Negative regulator of AmpC, AmpD n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JVS6_9GAMM Length = 206 Score = 146 bits (369), Expect = 7e-34, Method: Composition-based stats. Identities = 58/199 (29%), Positives = 82/199 (41%), Gaps = 40/199 (20%) Query: 15 AGCAGEKGIVEKEGYQLDTRRQAQAA---YPRIKVLVIHYTA------------------ 53 +G +G+ D R+ A I +LV+H + Sbjct: 18 SGWLSGEGVRHVPSPNFDERQVASPHCDEREAIDLLVVHNISLPPNQFGGEGIEQLFTNC 77 Query: 54 --DDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRL 111 + +VS+H LV + Q VP + AWHAG S++ G + Sbjct: 78 LDPSEHPYYEGIYQLKVSAHALVR-------RDGEVVQFVPFHKRAWHAGQSSYCGRDKC 130 Query: 112 NDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYH-IKPENVVAHADIA 170 ND +IGIELE Q PFE Q +AL+ L +I Y + E++V H+DIA Sbjct: 131 NDFAIGIELEGSDDQ---------PFEAEQYRALVALTAQLIQTYPQLSAEHIVGHSDIA 181 Query: 171 PQRKDDPGPLFPWQQLAQQ 189 P RK DPGP F W +Q Sbjct: 182 PGRKTDPGPHFKWADYRKQ 200 >UniRef50_Q1ARF9 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ARF9_RUBXD Length = 496 Score = 146 bits (368), Expect = 9e-34, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 77/213 (36%), Gaps = 28/213 (13%) Query: 13 LLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK--QVSS 70 + + G + ++ I +VIH T + S++ D QVS+ Sbjct: 193 MASADYGRATWYGAHPDNYTDSNRERSYD--INRIVIHVTQGSWSSAINWFKDGRAQVSA 250 Query: 71 HYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAG 130 HY V + +I Q V E ++AWHAG N SIGIE E Sbjct: 251 HYTVR------SSDGKIGQSVREADIAWHAGN------WDYNTHSIGIEHEGY------- 291 Query: 131 VKYFAPFEPAQIQALIPLAKDIIARYHIKPE--NVVAHADIAPQRKDDPGPLFPWQQLAQ 188 V F A ++ LA + +Y I + +++ H + DPGP + W + + Sbjct: 292 VSQKRWFTDAMYRSSARLAAYLCKKYRIPIDRKHIIGHNQVPGADHTDPGPYWNWDRYMR 351 Query: 189 QGI---GAWPDAQRVNFYLAGRAPHTPVDTASL 218 G+ Q V+ + D + Sbjct: 352 LVRSYAGSSTYTQVVDNSSPRFSASRAWDLNTW 384 >UniRef50_B8GT21 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GT21_THISH Length = 275 Score = 146 bits (368), Expect = 9e-34, Method: Composition-based stats. Identities = 59/215 (27%), Positives = 90/215 (41%), Gaps = 38/215 (17%) Query: 33 TRRQAQAAYPRIKVLVIHYTAD-DFDSSLATLTDKQV--SSHYLVPAVPPRYNGKPRIWQ 89 + ++LVIH+TA +SS+ + Q S+H ++ I Q Sbjct: 19 RKSPCHGGKMTPRLLVIHFTAGASAESSINWFLNPQAKASAHLVID-------RNGHITQ 71 Query: 90 LVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAP------------- 136 +VP +AWHAG S W + LN SIGIEL+N G + G ++ + Sbjct: 72 MVPFDTVAWHAGASRWNDLSGLNHHSIGIELDNAGRLQPHGDQWRSWFGRDYHDDEVLVA 131 Query: 137 -------------FEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPW 183 + QI+ + +A+ + ARY + E++V H DIAP RK DPGP FP Sbjct: 132 RHKHETEPSGWQLYTREQIETTLEVAQCLFARYGL--EDIVGHEDIAPGRKSDPGPAFPM 189 Query: 184 QQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASL 218 L + +G D+ V G + Sbjct: 190 GALRARLLGRQEDSLPVMRTTTGLNIRSGPGVRHP 224 >UniRef50_P13016 1,6-anhydro-N-acetylmuramyl-L-alanine amidase ampD n=65 Tax=Gammaproteobacteria RepID=AMPD_ECOLI Length = 183 Score = 145 bits (367), Expect = 1e-33, Method: Composition-based stats. Identities = 49/155 (31%), Positives = 66/155 (42%), Gaps = 16/155 (10%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVP 92 + + P I L A + +VS+H L+ I Q VP Sbjct: 37 SLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIR-------RDGEIVQYVP 89 Query: 93 EQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDI 152 + AWHAG+S ++G R ND SIGIELE + AQ Q L + + + Sbjct: 90 FDKRAWHAGVSQYQGRERCNDFSIGIELEGTD---------TLAYTDAQYQQLAAVTRAL 140 Query: 153 IARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLA 187 I Y +N+ H DIAP RK DPGP F W + Sbjct: 141 IDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFR 175 >UniRef50_C6APP4 Protein AmpD n=8 Tax=Gammaproteobacteria RepID=C6APP4_AGGAN Length = 184 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 53/186 (28%), Positives = 75/186 (40%), Gaps = 37/186 (19%) Query: 22 GIVEKEGYQLDTRRQAQAAYPRIKVLVIHYT--------------------ADDFDSSLA 61 G + + A+ I +L+IHY A + A Sbjct: 11 GWLTNTRKVVSPHFDARPNPQDISLLIIHYISLPPEQFGGSYIDDFFQGKLAPNRHPYFA 70 Query: 62 TLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELE 121 ++ +VS+H L+ N I Q V + AWHAGIS + G + ND +IGIELE Sbjct: 71 EISTLRVSAHCLI-------NRAGEITQYVNFNDRAWHAGISCFEGREKCNDFAIGIELE 123 Query: 122 NRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYH-IKPENVVAHADIAPQRKDDPGPL 180 PF Q +L L ++I+ Y I E +V H D++P RK DPG Sbjct: 124 GS---------NEQPFTTQQYVSLQRLTQEIMRAYPLITKERIVGHCDVSPGRKIDPGQY 174 Query: 181 FPWQQL 186 F W Sbjct: 175 FDWATY 180 >UniRef50_P82974 1,6-anhydro-N-acetylmuramyl-L-alanine amidase ampD n=192 Tax=Proteobacteria RepID=AMPD_CITFR Length = 187 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 49/159 (30%), Positives = 68/159 (42%), Gaps = 16/159 (10%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVP 92 + + P I L + A + +VS+H L+ I Q VP Sbjct: 37 SLPPGEFGGPWIDALFTGTIDPNAHPYFAGIAHLRVSAHCLIR-------RDGEIVQYVP 89 Query: 93 EQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDI 152 + AWHAG+S+++G R ND SIGIELE + AQ Q L + + Sbjct: 90 FDKRAWHAGVSSYQGRERCNDFSIGIELEGTD---------TLAYTDAQYQQLAAVTNAL 140 Query: 153 IARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGI 191 I RY N+ H +IAP+RK DPGP F W + Sbjct: 141 ITRYPAIANNMTGHCNIAPERKTDPGPSFDWARFRALVT 179 >UniRef50_A1K6E1 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Azoarcus sp. BH72 RepID=A1K6E1_AZOSB Length = 286 Score = 144 bits (364), Expect = 3e-33, Method: Composition-based stats. Identities = 53/210 (25%), Positives = 81/210 (38%), Gaps = 43/210 (20%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLATL----TDKQVSSHYLVPAVPPRYNGKPRIW 88 + K +V HYTA + A +++VS+H LV I Sbjct: 23 SASPNHNGIINPKFVVFHYTACSHADASAAFMNASGNRRVSAHLLVD-------SDGSIT 75 Query: 89 QLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGW----------------------- 125 Q V AWHAG+S W LN SIG+E+ N G+ Sbjct: 76 QFVDFNLRAWHAGVSEWEDYRDLNSHSIGVEIVNYGYLLKNSAGGFTLSNGRSSPFTPAE 135 Query: 126 -------QKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPG 178 +++ +Y+ F P Q++ L + + Y + +V+ H DIAP RK DPG Sbjct: 136 VVEARHRKEAVRHQYWHAFTPEQLETCEALVEVLFDAYAL--SDVLGHDDIAPTRKVDPG 193 Query: 179 PLFPWQQLAQQGIGAWPDAQRVNFYLAGRA 208 P FP ++ + +G D + V Sbjct: 194 PAFPMDRIKSRAVGRDSDIEMVEAVYVAVP 223 >UniRef50_C9R6I7 Protein AmpD n=1 Tax=Aggregatibacter actinomycetemcomitans D11S-1 RepID=C9R6I7_AGGAD Length = 217 Score = 144 bits (363), Expect = 3e-33, Method: Composition-based stats. Identities = 51/180 (28%), Positives = 71/180 (39%), Gaps = 37/180 (20%) Query: 31 LDTRRQAQAAYPRIKVLVIHYTADD--------------------FDSSLATLTDKQVSS 70 L + I +L+IHY + ++ +VS+ Sbjct: 53 LSPHFDQRPDPQDISLLIIHYISLPPEQFGGGYIDDFFQGKLDAQAHPYFQEISLLRVSA 112 Query: 71 HYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAG 130 H L+ RI Q V + AWHAG+S + G + ND +IGIELE Sbjct: 113 HCLI-------ERTGRITQYVNFNDRAWHAGLSYFEGREKCNDFAIGIELEGS------- 158 Query: 131 VKYFAPFEPAQIQALIPLAKDIIARYH-IKPENVVAHADIAPQRKDDPGPLFPWQQLAQQ 189 PF Q L L + I+ Y I E +V H D++P RK DPG F WQ+ Q Sbjct: 159 --NEQPFTTQQYDTLQRLTRQIMQAYPRITKERIVGHCDVSPGRKIDPGQYFDWQRYLQH 216 >UniRef50_Q0AC58 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=7 Tax=Gammaproteobacteria RepID=Q0AC58_ALHEH Length = 186 Score = 144 bits (362), Expect = 4e-33, Method: Composition-based stats. Identities = 54/161 (33%), Positives = 69/161 (42%), Gaps = 17/161 (10%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVP 92 + P I L + D A + +VS H L+ + Q VP Sbjct: 42 SLPPGAFGGPWIDRLFTNRLPADAHPYFARVHRLRVSCHLLIR-------RDGALTQYVP 94 Query: 93 EQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDI 152 AWHAG S G R ND +IGIELE P+ AQ Q L PL + + Sbjct: 95 LHRRAWHAGQSRLAGRERCNDFAIGIELEGTDET---------PYTEAQYQVLGPLCRTL 145 Query: 153 IARY-HIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIG 192 +A + I PE VV H+D+AP RK DPGP F W +L Sbjct: 146 MAAFPGITPERVVGHSDVAPGRKTDPGPAFDWARLRAALHA 186 >UniRef50_A4G8Q1 N-acetylmuramoyl-L-alanine amidase n=4 Tax=Burkholderiales RepID=A4G8Q1_HERAR Length = 185 Score = 143 bits (361), Expect = 5e-33, Method: Composition-based stats. Identities = 55/184 (29%), Positives = 74/184 (40%), Gaps = 21/184 (11%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVP 92 + Q P I L ++ D L +VS+H+L+ + Q V Sbjct: 12 SLPPEQFGGPFIADLFLNQLDYAADPYFEQLKLLRVSAHFLIR-------RDGNVMQFVS 64 Query: 93 EQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDI 152 ++ AWHAG S++ G R ND SIGIELE F PFE AQ AL L + Sbjct: 65 ARDRAWHAGASSFCGQERCNDFSIGIELEGTD---------FQPFEEAQYIALASLTVAL 115 Query: 153 IARYHIKPENVVAHADIAPQRKDDPGPLFPWQQ---LAQQGIGAWPDAQRVNFYLAGRAP 209 Y +V H IAP RK DPGP F W + L ++ W ++ Sbjct: 116 KQAY--PLRHVSGHEQIAPGRKTDPGPFFNWTEYQALYRKKYAEWRESAMQKLTEKQLQD 173 Query: 210 HTPV 213 T Sbjct: 174 RTAP 177 >UniRef50_Q65VN8 AmpD protein n=13 Tax=Gammaproteobacteria RepID=Q65VN8_MANSM Length = 190 Score = 143 bits (361), Expect = 5e-33, Method: Composition-based stats. Identities = 50/179 (27%), Positives = 71/179 (39%), Gaps = 37/179 (20%) Query: 31 LDTRRQAQAAYPRIKVLVIHYTA--------------------DDFDSSLATLTDKQVSS 70 + ++ + I +LVIHY + + T+ +VS+ Sbjct: 22 ISPHFDSRPSQADISLLVIHYISLPPEQFGGGYIEDFFQGKLNPETHPYFQTIYQIRVSA 81 Query: 71 HYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAG 130 H L+ R+ Q V + AWHAG S ++G + ND +IGIELE Sbjct: 82 HCLI-------GRDGRVTQFVSFNDRAWHAGESCFQGREKCNDYAIGIELEGS------- 127 Query: 131 VKYFAPFEPAQIQALIPLAKDIIARYH-IKPENVVAHADIAPQRKDDPGPLFPWQQLAQ 188 PF Q Q L L I Y I + +V H D+AP RK DPG F W + Sbjct: 128 --NEQPFTEVQYQRLAELTNIIRHYYPKITEDRIVGHCDVAPGRKIDPGQYFEWTKYFD 184 >UniRef50_UPI0000D5333F negative regulator of AmpC, AmpD n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D5333F Length = 196 Score = 143 bits (360), Expect = 7e-33, Method: Composition-based stats. Identities = 49/186 (26%), Positives = 74/186 (39%), Gaps = 37/186 (19%) Query: 29 YQLDTRRQAQAAYPRIKVLVIH--------------------YTADDFDSSLATLTDKQV 68 Y + + +++VIH ++ +V Sbjct: 27 YLNSPNQDDRRDGQDPEIIVIHGISLPPGEYGGSYVCDLFLNSLDTSVCEYFKEISTLKV 86 Query: 69 SSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKS 128 SSH + + R+ Q VP AWHAG SA+RG N SIGIELE + + Sbjct: 87 SSHLFINRL-------GRVMQFVPFNSRAWHAGESAYRGREMCNHFSIGIELEGQDNDE- 138 Query: 129 AGVKYFAPFEPAQIQALIPLAKDIIARYH-IKPENVVAHADIAPQRKDDPGPLFPWQQLA 187 + Q L + + Y I ++V H+DIAP+RK DPGP F W++L Sbjct: 139 --------YSDIQYVILAKIINALFEFYPRISARDIVGHSDIAPKRKTDPGPAFNWKRLY 190 Query: 188 QQGIGA 193 ++ G Sbjct: 191 REISGQ 196 >UniRef50_C9N2Y5 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9N2Y5_9ACTO Length = 443 Score = 143 bits (360), Expect = 7e-33, Method: Composition-based stats. Identities = 44/225 (19%), Positives = 83/225 (36%), Gaps = 32/225 (14%) Query: 8 VAAALLLAGCAGEKGIVEKEGY-QLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK 66 +A + A +K+ Y DT + +K +V+H T D+D++L + Sbjct: 42 LACDWVPAAYQQTGDPEDKDTYGNYDTAN--RPDSNAVKFIVLHDTEVDYDTTLKIFQNP 99 Query: 67 --QVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRG 124 Q S+HY+V + + Q+V +++AW AG LN SIGIE E Sbjct: 100 ANQTSAHYVVRSA------DGHVTQMVKNKDVAWQAGN------WYLNTHSIGIEQEGVA 147 Query: 125 WQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPE--NVVAHADIAPQ-------RKD 175 + + + ++ L + + A+Y I + +++ H + P Sbjct: 148 AEGA------TWYTSEMYRSTARLVRYLAAKYDIPLDRQHILGHDGVPPTSAAGTKNMHW 201 Query: 176 DPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLE 220 DPGP + W + + L + + + Sbjct: 202 DPGPYWDWNRFMALLGAPTAPSAPKRSELVTVSADFARNQQEFRD 246 >UniRef50_A8FQB8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=22 Tax=Gammaproteobacteria RepID=A8FQB8_SHESH Length = 205 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 50/189 (26%), Positives = 74/189 (39%), Gaps = 42/189 (22%) Query: 26 KEGYQLDTRRQAQAAYP-----RIKVLVIHYTA--------------------DDFDSSL 60 +G+ D RR + + +LVIH + D+S Sbjct: 30 ADGWINDARRCESPHFNHRPLNEVSLLVIHNISLPAGCFGESYIDQLFKGCLDVSADASF 89 Query: 61 ATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIEL 120 L +VS+H+L+ + Q V + AWHAG+S++ ND +IGIEL Sbjct: 90 IDLKGLEVSAHFLIR-------RDGELVQYVSCGDRAWHAGVSSYGSREGCNDFAIGIEL 142 Query: 121 ENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYH-IKPENVVAHADIAPQRKDDPGP 179 E + Q + L L + Y + + VV H DIAP RK DPG Sbjct: 143 EGTD---------TLAYTEQQYRELKILTLALFDAYPMLNIDRVVGHCDIAPGRKTDPGE 193 Query: 180 LFPWQQLAQ 188 F WQ+ + Sbjct: 194 SFDWQRFKK 202 >UniRef50_C5TMG7 Protein AmpD n=4 Tax=Neisseriaceae RepID=C5TMG7_NEIFL Length = 199 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 50/180 (27%), Positives = 72/180 (40%), Gaps = 38/180 (21%) Query: 32 DTRRQAQAAYPRIKVLVIHYTA--------------------DDFDSSLATLTDKQVSSH 71 + I ++V+H + D + + +VSSH Sbjct: 33 SPNFSPREPDEDISLVVLHNISLPPFEYNTGAVENLFTNQINPDEHPFFSIIHTLRVSSH 92 Query: 72 YLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGV 131 + + K Q V ++A+HAG+S+++G + N SIGIELE Sbjct: 93 FFIS-------RKGETVQFVSCDDMAYHAGVSSFQGREKCNAFSIGIELEGCD------- 138 Query: 132 KYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGI 191 F PF AQ +L L I Y I+ V H DIAP RK DPG F W +L + G Sbjct: 139 --FEPFTEAQYTSLQALLTAISEHYPIQA--VTGHQDIAPDRKTDPGHFFDWPRLQKAGF 194 >UniRef50_B0VMP8 N-acetyl-anhydromuramyl-L-alanine amidase (Regulates ampC) n=25 Tax=Proteobacteria RepID=B0VMP8_ACIBS Length = 189 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 49/178 (27%), Positives = 67/178 (37%), Gaps = 36/178 (20%) Query: 31 LDTRRQAQAAYPRIKVLVIHYTAD--------------------DFDSSLATLTDKQVSS 70 + A I+++V+H + T+ QVS+ Sbjct: 21 PSPNFNQRPAGTEIQMIVVHNISLPPSQFGGGYIEQFFQNKLDWSVHPYFQTIEGMQVST 80 Query: 71 HYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAG 130 H L+ + Q V + AWHAG S++ ND SIGIELE Sbjct: 81 HLLIL-------RTGEVLQFVNFNDRAWHAGRSSYLAKIECNDYSIGIELEGSDD----- 128 Query: 131 VKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQ 188 PFE Q + L + I Y ++ H+DIAP RK DPGP F WQ Q Sbjct: 129 ----LPFEDLQYEVLTDVVTAIRQAYPEIKNHIAGHSDIAPGRKTDPGPYFKWQHFRQ 182 >UniRef50_C0R4G3 N-acetylmuramoyl-L-alanine amidase, family 2 n=9 Tax=Wolbachia RepID=C0R4G3_WOLWR Length = 525 Score = 140 bits (354), Expect = 4e-32, Method: Composition-based stats. Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 44/239 (18%) Query: 30 QLDTRRQAQAAYPRIKVLVIHYTADD-FDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIW 88 A ++ ++++H+T + TL + +S H++V I Sbjct: 86 PASALNYGDRAGKKVLMVIVHHTETSTLKGTKDTLNARGLSVHFIVD-------RDGNIT 138 Query: 89 QLVPEQELAWHAGISAWRGATR--------LNDTSIGIELENRGWQKSAGVKYFAPFEPA 140 +VP ++ AWHAGIS R LN+ S+GIE+ N G PF Sbjct: 139 LMVPLEKEAWHAGISYARVKVDSKLEELRKLNNYSVGIEIVNTG---------LEPFPEE 189 Query: 141 QIQALIPLAKDIIARYHIKPENVVAHADI-----APQ-----RKDDPGPLFPWQQLAQQG 190 Q++++ L ++ R+ IK + + +H++I P+ RK DP LF W+ L + Sbjct: 190 QMRSVKELILYLMERFKIKRDMIFSHSEIGTIVYDPELGYTMRKPDPHKLFDWELLEKNE 249 Query: 191 IGAWPDAQRVNFYLAGRAPHTPVDTAS-------LLELLARYGYDVKPDMTPREQRRVI 242 IG + + T L + L R+ Y ++P ++ VI Sbjct: 250 IGLHISDRINPKDAKHKMGKTLYKAGDRNEGILKLKQRLNRFFYKIEP--WNDKKGNVI 306 >UniRef50_B3QXY2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QXY2_CHLT3 Length = 288 Score = 140 bits (353), Expect = 4e-32, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 77/189 (40%), Gaps = 38/189 (20%) Query: 32 DTRRQAQAAYPRIKVLVIHYTAD-DFDSSLATLTDK--QVSSHYLVPAVPPRYNGKPRIW 88 + + +VIHYTA D SS+ TL + S+H ++ I+ Sbjct: 21 TPNHSGTFSAGKADTIVIHYTAGRDARSSVQTLCSPDLKASAHLVI-------GRNGEIY 73 Query: 89 QLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKY--------------- 133 QL P + WHAG S W + LN SIGIE++N G G +Y Sbjct: 74 QLAPFDRITWHAGKSNWHERSGLNQFSIGIEIDNAGRLTKQGTEYLSWFGKSYAANEVFS 133 Query: 134 -----------FAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFP 182 + + AQI + + + + Y I + ++ H +I+P RK DPGP FP Sbjct: 134 GVHRHEQTLSFWHRYTEAQILLVEEICRLLRQVYDI--KEILGHEEISPGRKTDPGPAFP 191 Query: 183 WQQLAQQGI 191 L + Sbjct: 192 LDVLRNHVL 200 >UniRef50_C4DNA4 Negative regulator of beta-lactamase expression n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DNA4_9ACTO Length = 330 Score = 140 bits (353), Expect = 5e-32, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 78/214 (36%), Gaps = 23/214 (10%) Query: 32 DTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK--QVSSHYLVPAVPPRYNGKPRIWQ 89 + ++ I +VIH + A + +V++HYLV + + Q Sbjct: 50 NYTNASRPKSDPINKVVIHTMQGTASGTKAWFRNPKSEVTTHYLVSSSK------GSVTQ 103 Query: 90 LVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLA 149 +V E ++AWHAG N TSIGIE E + ++ L Sbjct: 104 MVHESDIAWHAGN------WDYNKTSIGIEHEGYVQDPK------KWYTTNMYESSARLV 151 Query: 150 KDIIARYHIKPE--NVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGR 207 + I RY+I + +++AH+++ DPG + W + + + ++ AG Sbjct: 152 RSICDRYNIPMDRKHIIAHSEVPGATHTDPGKGWNWDRYMDLVRESKTQSFSMDNDSAGV 211 Query: 208 APHTPVDTASLLELLARYGYDVKPDMTPREQRRV 241 + A + Y Y + V Sbjct: 212 SASDAWQRAKVPNG-RDYAYASPVAKSDPLWYTV 244 >UniRef50_A4A5I4 Anhydro-N-acetylmuramyl-tripeptide amidase n=1 Tax=Congregibacter litoralis KT71 RepID=A4A5I4_9GAMM Length = 196 Score = 140 bits (352), Expect = 6e-32, Method: Composition-based stats. Identities = 46/157 (29%), Positives = 67/157 (42%), Gaps = 17/157 (10%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVP 92 + + ++ L + D S L +VS+H+ + N + + Q V Sbjct: 40 SLPPGRFGGDDVEALFCNTLDCSRDPSFDELRGLEVSAHFFI-------NREGALTQFVS 92 Query: 93 EQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDI 152 + AWHAG+S W ND SIGIELE + +E Q L L ++ Sbjct: 93 CHDRAWHAGVSTWGSRVNCNDFSIGIELEGTD---------YQAYEDMQYAMLSSLIGEL 143 Query: 153 IARYH-IKPENVVAHADIAPQRKDDPGPLFPWQQLAQ 188 R + +V H+DIAP RK DPG F W +L Q Sbjct: 144 RCRMPSLARGPIVGHSDIAPGRKTDPGEAFDWNRLRQ 180 >UniRef50_A1TKH5 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=Acidovorax RepID=A1TKH5_ACIAC Length = 209 Score = 139 bits (351), Expect = 8e-32, Method: Composition-based stats. Identities = 58/179 (32%), Positives = 76/179 (42%), Gaps = 38/179 (21%) Query: 31 LDTRRQAQAAYPRIKVLVIHYTAD--------------------DFDSSLATLTDKQVSS 70 + A I ++V+H + D A + QVS+ Sbjct: 34 PSPNFGPRPAQAAIDLIVVHSISLPPGEYGTGEVQRLFTNALDWDAHPYYAGIRGLQVSA 93 Query: 71 HYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAG 130 H+ + R+WQ V + AWHAG SA+RG ND SIGIELE Sbjct: 94 HFFI-------ERGGRLWQFVDCGDRAWHAGPSAYRGRDNCNDDSIGIELEGLEGD---- 142 Query: 131 VKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQ 189 FEPAQ QAL L +DI RY +V H +AP RK DPGP F W++L + Sbjct: 143 -----TFEPAQYQALATLCRDIAQRY--PVAHVAGHEHVAPGRKRDPGPGFDWRELRSR 194 >UniRef50_A9AXU4 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AXU4_HERA2 Length = 748 Score = 139 bits (350), Expect = 9e-32, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 74/217 (34%), Gaps = 29/217 (13%) Query: 13 LLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK--QVSS 70 ++ ++ Y A + ++IH T + ++ + S+ Sbjct: 240 VIPAAYALNNPNDRSDYGNYDLANRPADGLDFRYILIHDTEITYTQTVNVFQNPATGAST 299 Query: 71 HYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAG 130 HY++ A I Q+V + + WHAG +N SIGIE E + + Sbjct: 300 HYVIRAS------DGHIAQMVENKNVPWHAGN------WDVNGHSIGIEHEGIAIEGA-- 345 Query: 131 VKYFAPFEPAQIQALIPLAKDIIARYHIKPE--NVVAHADIAP-------QRKDDPGPLF 181 + A QA L + + +Y I + +++ H ++ DPGP + Sbjct: 346 ----TWYSEAMYQASAQLTRYLADKYQIPLDRSHIIGHDELPGPLPQHQAGMHWDPGPFW 401 Query: 182 PWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASL 218 W G + L P+ + +L Sbjct: 402 DWAHYMDLVRGGPAPISNPDPQLVTINPNFDSNMPAL 438 >UniRef50_B2JH28 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=51 Tax=Proteobacteria RepID=B2JH28_BURP8 Length = 212 Score = 139 bits (350), Expect = 1e-31, Method: Composition-based stats. Identities = 58/192 (30%), Positives = 83/192 (43%), Gaps = 39/192 (20%) Query: 19 GEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTA--------------------DDFDS 58 G V++ +A+ R ++V+H + D Sbjct: 18 DANGWVDEARQLPSPNFEARPNGARPTLIVVHNISLPPNEFGGPGITDLFLNRLDCDAHP 77 Query: 59 SL-ATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIG 117 A L D +VS+H+++ + Q V E AWHAG S + G R ND SIG Sbjct: 78 YYDAHLRDVRVSAHFVIR-------RDGALEQYVSCDERAWHAGASNFFGRERCNDFSIG 130 Query: 118 IELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDP 177 IELE +PFE AQ L PL + + A Y I +++ H+DIAP RK DP Sbjct: 131 IELEGSDA---------SPFERAQYATLAPLVRSLAAHYEI--DSLAGHSDIAPGRKTDP 179 Query: 178 GPLFPWQQLAQQ 189 GP F W +L ++ Sbjct: 180 GPHFEWPRLQRE 191 >UniRef50_Q8ES14 Putative uncharacterized protein OB0830 n=1 Tax=Oceanobacillus iheyensis RepID=Q8ES14_OCEIH Length = 234 Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats. Identities = 50/233 (21%), Positives = 87/233 (37%), Gaps = 53/233 (22%) Query: 1 MRRFFWLVAAALLLAGCAGE----------------KGIVEKEGYQLDTRRQAQAAYPR- 43 + + +++ A L C E V E +D + + PR Sbjct: 4 LWKISFVIVALFFLVACKQEVTKDTLEVAAKEEKVESVEVNFEEKMIDMYLPEENSEPRD 63 Query: 44 --IKVLVIHYTAD---------DFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVP 92 + +++H++++ + D VS+HY++ I++ V Sbjct: 64 SLVTHVMLHFSSNVIEKPEDPFQVEDIYKVFHDYGVSTHYVID-------RTGEIYRFVS 116 Query: 93 EQELAWHAGISAWRG----ATRLNDTSIGIELENRGWQKSAGVKYFAP-----------F 137 E A+HAG G +N SIGIEL G ++ + Sbjct: 117 EDRNAYHAGEGKIEGVPKYENNMNRYSIGIELLAIGTKEEMMPMMSPELYDTISSKHIGY 176 Query: 138 EPAQIQALIPLAKDIIARY---HIKPENVVAHADIAPQRKDDPGPLFPWQQLA 187 Q AL L DI +R+ + +++ H + AP+RK DPG LF W++L Sbjct: 177 TDKQYDALQDLLIDISSRHHKLKLNRNHIIGHQEYAPERKTDPGALFDWERLM 229 >UniRef50_D2PZI0 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PZI0_9ACTO Length = 455 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 43/198 (21%), Positives = 75/198 (37%), Gaps = 25/198 (12%) Query: 30 QLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK--QVSSHYLVPAVPPRYNGKPRI 87 T I +VIH T + +++ + QVS+HY++ + ++ Sbjct: 224 PASTSNYRVGRTAAISTIVIHVTQGSYTGTISWFKNPASQVSAHYVIR------SSDGQV 277 Query: 88 WQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIP 147 Q+V E++ AWHA N ++GIE E V + F A ++ Sbjct: 278 TQMVAEKDTAWHA--------RSTNPYTVGIEHEG-------WVDQPSWFTDAMYRSSAA 322 Query: 148 LAKDIIARYHIKPE--NVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLA 205 L + I R I + ++ H ++ DPGP + W Q G P + + Sbjct: 323 LTRSIADRRGIPKDRAHIRGHNELPDNDHTDPGPNWNWTYYMQLVNGGTPTSNFTTYGSG 382 Query: 206 GRAPHTPVDTASLLELLA 223 R +A ++ LA Sbjct: 383 VRVRSDARLSAPIVTTLA 400 >UniRef50_B1XX10 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=5 Tax=Proteobacteria RepID=B1XX10_LEPCP Length = 209 Score = 137 bits (345), Expect = 4e-31, Method: Composition-based stats. Identities = 63/214 (29%), Positives = 86/214 (40%), Gaps = 46/214 (21%) Query: 13 LLAGCAGEKGIVEKEGYQ------LDTRRQAQAAYPRIKVLVIHYTADD----------- 55 + GC + G+ ++ I + V+H + Sbjct: 1 MTPGCGMRRSGAWSRGWHRDARRVPSPNFGSRPVGASIDLAVVHSISLPPGVYGGDAIER 60 Query: 56 ---------FDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWR 106 ATL QVS+H+++ + Q V +E AWHAG S+WR Sbjct: 61 FFTNRLDPAAHPYFATLAGLQVSAHFVIR-------RDGELLQFVDVRERAWHAGASSWR 113 Query: 107 GATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAH 166 G + ND S+GIELE Q+ FEPAQ + L L +D AR VV H Sbjct: 114 GRSNCNDHSLGIELEGLEGQR---------FEPAQYRVLAGLLRD--ARTAWPLREVVGH 162 Query: 167 ADIAPQRKDDPGPLFPWQQLAQQGIGA--WPDAQ 198 IAP RK DPG F W +LA+ GA W A+ Sbjct: 163 EHIAPGRKHDPGAGFDWCRLARHLRGARLWVPAE 196 >UniRef50_C9LCL1 N-acetylmuramoyl-L-alanine amidase CwlL n=2 Tax=Clostridiales RepID=C9LCL1_RUMHA Length = 469 Score = 137 bits (344), Expect = 5e-31, Method: Composition-based stats. Identities = 51/239 (21%), Positives = 87/239 (36%), Gaps = 37/239 (15%) Query: 31 LDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLT-----DKQVSSHYLVPAVPPRYNGKP 85 + + + RIK +VIHY + ++ S+HY V Sbjct: 7 ISGYNFNKGSISRIKYIVIHY-VGALGGAEDNCRYYGGGNRNASAHYFV-------GFNG 58 Query: 86 RIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAP--FEPAQIQ 143 +WQ V + +AWH G S+++ A N SIGIE+ R + FE A ++ Sbjct: 59 EVWQCVEDANIAWHCGASSYKHAECRNANSIGIEMCVRKKNTKSMGATDKDWYFEDATVE 118 Query: 144 ALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLF------PWQQLAQQGIGAWPDA 197 A L + ++ +Y + +V+ H D+ K P P W + ++ G Sbjct: 119 AAAELTRYLMNKYGVPASHVIRHYDVTG--KICPNPYVYNTSAHTWDEFKRKISGQAETP 176 Query: 198 QR-----VNFYLAGRAPHTPVDTASLLELLARYG---------YDVKPDMTPREQRRVI 242 Q + +L G+ + + L A G Y+ K T E + Sbjct: 177 QGSNEKIIWNFLTGKGLNAYAVAGIMGNLYAESGLMPNNLQNTYNNKLGKTDAEYTAAV 235 >UniRef50_D1CGY2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CGY2_THET1 Length = 638 Score = 137 bits (344), Expect = 5e-31, Method: Composition-based stats. Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 29/189 (15%) Query: 36 QAQAAYPRIKVLVIHYTADDFDSSLATLT-DKQVSSHYLVPAVPPRYNGKPRIWQLVPEQ 94 A I+ +VIH T + S+L+T T VS+HYL+ + + QLVP + Sbjct: 263 NRPADGLEIQYIVIHDTEGSYASALSTFTSQSYVSAHYLIR------SSDGLVTQLVPTK 316 Query: 95 ELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIA 154 ++AW AG +N SIGIE E + + + ++ L + + A Sbjct: 317 DVAWQAGN------WYVNIHSIGIEHEGFAVEGA------TWYTEQMYRSSARLVRYLAA 364 Query: 155 RYHIKPE--NVVAHADIAP------QR-KDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLA 205 R+HI + +++ H D+ R DPGP + W +G P +QR + A Sbjct: 365 RFHIPLDRAHILGHDDVPGPGPAYQGRMHWDPGPYWDWAHYM-ALLGIAPRSQRAHGVTA 423 Query: 206 GRAPHTPVD 214 GR + Sbjct: 424 GRIVMIAPN 432 >UniRef50_A4SVB0 N-acetylmuramoyl-L-alanine amidase, family 2 n=4 Tax=Proteobacteria RepID=A4SVB0_POLSQ Length = 225 Score = 136 bits (342), Expect = 9e-31, Method: Composition-based stats. Identities = 54/205 (26%), Positives = 83/205 (40%), Gaps = 43/205 (20%) Query: 19 GEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTA------------------------D 54 E+G + ++ + A+ +LVIH+ + Sbjct: 34 DEQGWLGFAQWRESPNQDARPENIEPDLLVIHHISLPPGEFKAQDSSQYIIDFFQNRLDP 93 Query: 55 DFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDT 114 + A + ++VSSH+L+ R+ Q V + AWHAG+S++ G + ND Sbjct: 94 NRHPYFAEIEGQKVSSHFLITRS-------GRLIQFVSTKHKAWHAGLSSFLGREKCNDF 146 Query: 115 SIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRK 174 SIGIELE G PFE Q + L + A Y H+DIAP+RK Sbjct: 147 SIGIELEGDGET---------PFEEIQYKVLSETVGKLSATY--PSLQFAGHSDIAPERK 195 Query: 175 DDPGPLFPWQQLAQQGIGAWPDAQR 199 DPG F W++ ++ G D Sbjct: 196 TDPGISFDWKRFQKE-TGLSLDKLP 219 >UniRef50_D1XLT9 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Streptomyces sp. ACTE RepID=D1XLT9_9ACTO Length = 444 Score = 135 bits (341), Expect = 1e-30, Method: Composition-based stats. Identities = 44/193 (22%), Positives = 80/193 (41%), Gaps = 32/193 (16%) Query: 8 VAAALLLAGCAGEKGIVEKEGY-QLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK 66 +A + A +KE Y DT + ++ ++ +V+H T D+D++L D Sbjct: 43 LACDWVPAAYRQTGDPADKEAYGNYDTADRPRS--NAVEFIVLHDTEVDYDTTLKIFQDP 100 Query: 67 --QVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRG 124 + S+HY+V + + Q+V +++AW AG LN SIGIE E Sbjct: 101 ANKTSAHYVVRSA------DGHVTQMVKNKDVAWQAGN------WYLNTHSIGIEQEGVA 148 Query: 125 WQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPE--NVVAHADIAPQ-------RKD 175 + + + A ++ L + + A Y I + +++ H + P Sbjct: 149 AEGA------KWYTDAMYRSTARLVRHLAAVYDIPLDRQHILGHDGVPPTSAAGTQNMHW 202 Query: 176 DPGPLFPWQQLAQ 188 DPGP + W + Sbjct: 203 DPGPYWDWNRFMA 215 >UniRef50_D0LQ75 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=4 Tax=Myxococcales RepID=D0LQ75_HALO1 Length = 551 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 50/191 (26%), Positives = 72/191 (37%), Gaps = 30/191 (15%) Query: 14 LAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK--QVSSH 71 LA V + ++R ++VIH + S + LT+ VS+H Sbjct: 225 LAAGPDYADSVWRPSPNYNSRPSGSIGD--PAMVVIHTCEGSYSSCWSWLTNSASGVSAH 282 Query: 72 YLVPAVPPRYNGKPRIWQLVPEQELAWHAGIS----------AWRGATRLNDTSIGIELE 121 Y+V +I QLV E + AWH G S WR N +IGIE Sbjct: 283 YVVNESGS------QISQLVRESQRAWHIGASYQCSNNSSVDCWRNGYSSNHFTIGIEH- 335 Query: 122 NRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPE--NVVAHADIAPQRKDDPGP 179 G + F QI A L DI I + ++V+H + P + DPGP Sbjct: 336 -------GGFASQSSFPSGQIDASARLVCDITRDQGIPRDRYHIVSHGQLQPYNRTDPGP 388 Query: 180 LFPWQQLAQQG 190 +PW + Sbjct: 389 NWPWTTYLNKI 399 >UniRef50_B5HCN0 Secreted protein n=3 Tax=Streptomyces RepID=B5HCN0_STRPR Length = 895 Score = 135 bits (339), Expect = 2e-30, Method: Composition-based stats. Identities = 49/222 (22%), Positives = 79/222 (35%), Gaps = 30/222 (13%) Query: 17 CAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQV--SSHYLV 74 C G + T I+ +VIH T +D SLA LT+ V S+HYL+ Sbjct: 250 CNFVPSRTSSTGKRNYTLGDRPNQGVDIRQIVIHDTEGGYDGSLAALTNPDVPGSAHYLI 309 Query: 75 PAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYF 134 A + Q++ + LAWHAG W N +IG+E E ++ Sbjct: 310 RAS------DGLVTQMIENKHLAWHAG--NWTH----NMHAIGVEHEGYAIKEG------ 351 Query: 135 APFEPAQIQALIPLAKDIIARYHIKPE--NVVAHADIA-------PQRKDDPGPLFPWQQ 185 + Q Q+ L K + +Y++ + +++ H ++A D GP + W Sbjct: 352 KWYTEPQYQSSADLVKFLATKYNVPLDREHIIGHDEVALQTDAGMANLHWDAGPYWDWNH 411 Query: 186 LAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASL-LELLARYG 226 D AG+ + L G Sbjct: 412 YMGLMGAPQGDQGAGGPLKAGQVVRVVPPFTTANQPKLTVGG 453 >UniRef50_B5GAH2 Amidase n=15 Tax=Streptomyces RepID=B5GAH2_9ACTO Length = 200 Score = 134 bits (336), Expect = 4e-30, Method: Composition-based stats. Identities = 41/176 (23%), Positives = 70/176 (39%), Gaps = 23/176 (13%) Query: 19 GEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK--QVSSHYLVPA 76 G + + + ++ +VIH T + F +LA + QV++HY+V + Sbjct: 41 DFPGAEWVPASTANYTVAKRPSQYPVEYVVIHVTQEYFTDTLAIFQNPAKQVTAHYVVRS 100 Query: 77 VPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAP 136 + Q V E+++AWHAG N SIGIE E V Sbjct: 101 A------DGHLAQCVREKDVAWHAGN------WDYNTRSIGIEHEG-------WVDRPEY 141 Query: 137 FEPAQIQALIPLAKDIIARYHIKPE--NVVAHADIAPQRKDDPGPLFPWQQLAQQG 190 F A +A L + RY + + +++ H ++ DPG L+ W + + Sbjct: 142 FTDAMFEASAALTASVCERYGVPKDREHILGHVEVPGTDHTDPGALWDWTKYLRLV 197 >UniRef50_B3R6P0 N-acetyl-anhydromuranmyl-L-alanine amidase n=3 Tax=Betaproteobacteria RepID=B3R6P0_CUPTR Length = 205 Score = 133 bits (335), Expect = 5e-30, Method: Composition-based stats. Identities = 54/197 (27%), Positives = 75/197 (38%), Gaps = 42/197 (21%) Query: 12 LLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTA------------------ 53 L D A+ + ++V+H + Sbjct: 15 FLPGADGWVPAARRVPSPNFD----ARPDGMPVDLVVLHNISLPPGQFGSGDIEAFFQNR 70 Query: 54 --DDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRL 111 D AT+ QVS+H+LV + Q VP + AWHAG S + G R Sbjct: 71 LDPDKHPFFATIHQIQVSAHFLVTRS-------GELVQFVPCTQRAWHAGQSEFFGRARC 123 Query: 112 NDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAP 171 ND SIGIE+E PF AQ L + + A Y ++ + H+DIAP Sbjct: 124 NDFSIGIEIEGTDD---------VPFTAAQYNTTAALVRALRAAYPVQA--IAGHSDIAP 172 Query: 172 QRKDDPGPLFPWQQLAQ 188 RK DPGP F W + A+ Sbjct: 173 GRKTDPGPHFDWNRFAR 189 >UniRef50_D0J795 N-acetylmuramyl-L-alanine amidase, negative n=9 Tax=Proteobacteria RepID=D0J795_COMTE Length = 209 Score = 133 bits (335), Expect = 6e-30, Method: Composition-based stats. Identities = 62/202 (30%), Positives = 78/202 (38%), Gaps = 40/202 (19%) Query: 32 DTRRQAQAAYPRIKVLVIHYTAD--------------------DFDSSLATLTDKQVSSH 71 + A +I ++VIH + D + +VSSH Sbjct: 28 SPNFGPRPADAQIDLVVIHSISLPPGQYGTGAVQQLFTNQLDWDAHPYYQGIRGLEVSSH 87 Query: 72 YLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGV 131 + + + IWQ V + AWHAG+S WRG R ND SIGIELE Sbjct: 88 FFI-------TRQGEIWQFVSCDDRAWHAGVSQWRGRERCNDDSIGIELEGL-------- 132 Query: 132 KYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGI 191 FE Q QAL L I A Y + H IAP RK DPGP F WQ+L Q + Sbjct: 133 -EGLSFEAPQYQALQQLCMAIAAHY--PVRYIAGHEHIAPGRKQDPGPGFDWQRL-QLQL 188 Query: 192 GAWPDAQRVNFYLAGRAPHTPV 213 G D R + A Sbjct: 189 GR-ADGTRSWEFPPSPAASGAA 209 >UniRef50_A0L5K2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=Proteobacteria RepID=A0L5K2_MAGSM Length = 183 Score = 132 bits (333), Expect = 9e-30, Method: Composition-based stats. Identities = 48/156 (30%), Positives = 63/156 (40%), Gaps = 17/156 (10%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVP 92 + Q I L + D + +V++H+L+ I Q VP Sbjct: 31 SLPPGQFGGGWIDDLFMGVLDAQADPYFVGIASLRVAAHFLI-------GRDGGITQYVP 83 Query: 93 EQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDI 152 + WHAG S W+G R ND SIG+ELE PF Q Q L L + + Sbjct: 84 LSKRGWHAGESVWQGRPRCNDFSIGVELEG---------DEEHPFAAIQYQRLAQLTRTL 134 Query: 153 IARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQ 188 R + VV H DIAP RK DPG F W + Sbjct: 135 QQRLP-RLVEVVGHQDIAPGRKWDPGRQFDWPRFRA 169 >UniRef50_A1AXT9 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=Proteobacteria RepID=A1AXT9_RUTMC Length = 174 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 47/179 (26%), Positives = 72/179 (40%), Gaps = 38/179 (21%) Query: 30 QLDTRRQAQAAYPRIKVLVIHYTA--------------------DDFDSSLATLTDKQVS 69 Q+++ + I ++VIH + ++ D +VS Sbjct: 12 QINSPNFNKRPNQAISLIVIHSISLPPGKFNNNHIEKFFTNQLDTSQHPYFKSIKDLKVS 71 Query: 70 SHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSA 129 +H L+ I Q VP + AWHAG S ++G ND SIGIEL+ Sbjct: 72 AHLLIK-------RNGMIIQFVPFNQRAWHAGKSNYKGKHNCNDFSIGIELQGDDNTS-- 122 Query: 130 GVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQ 188 +E Q + L + + + Y I + H+DI+P RK DPGP F W +L Sbjct: 123 -------YELVQYKVLNNVIDLLKSHYPIST--IKGHSDISPIRKTDPGPYFKWSKLHA 172 >UniRef50_UPI0001B539A2 amidase n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B539A2 Length = 638 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 72/197 (36%), Gaps = 31/197 (15%) Query: 16 GCAGEKGIVEKEGYQLDTRRQA-QAAYPRIKVLVIHYTADDFDSSLATLTDK-QVSSHYL 73 C +K G QA + +I +VIH T +DS L Q + HY Sbjct: 249 ACESAPAPFQKIGDSYGNYDQADRPHDQKIDYIVIHDTEGTWDSVLKQAQTPGQTAWHYT 308 Query: 74 VPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKY 133 V + ++ Q VP +++ WHAG LN+ S+GIE E Q Sbjct: 309 VR------SSDGQVAQHVPTKDVGWHAGN------WYLNEKSLGIEHEGFAAQG------ 350 Query: 134 FAPFEPAQIQALIPLAKDIIARYHIKPE--NVVAHADIAP-------QRKDDPGPLFPWQ 184 F A + L + + R+ + + +++ H ++ DPGP + W Sbjct: 351 -TWFTEAMYRQSAKLVRYLAHRFGVPLDRAHILGHDNVPGPNADKIKSMHWDPGPYWDWA 409 Query: 185 QLAQQGIGAWPDAQRVN 201 +GA + Sbjct: 410 HYFD-LLGAPLEHDGAP 425 >UniRef50_D2Q0D6 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Kribbella flavida DSM 17836 RepID=D2Q0D6_9ACTO Length = 638 Score = 132 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 65/166 (39%), Gaps = 26/166 (15%) Query: 32 DTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLV 91 + + + +I +++H T + +L + D V + +IWQ V Sbjct: 258 NHDKANRPETGKINYIIVHDTETSWQGTLRLVQDP-----TYVSWQYTMRSSDGQIWQHV 312 Query: 92 PEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKD 151 +++AWHAG +N SIGIE E Q + + A + L + Sbjct: 313 KAKDVAWHAGN------WYMNMHSIGIEHEGYAAQGA------TWYTEALYRNSARLVRY 360 Query: 152 IIARYHIKPE--NVVAHADIAP-------QRKDDPGPLFPWQQLAQ 188 + ++ I + +++ H +I DPGP + W++ + Sbjct: 361 LAEKHDIPLDRAHIIGHDEIPGTLPTTVAGMHWDPGPYWDWERYFE 406 >UniRef50_D1X7T3 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=19 Tax=Streptomyces RepID=D1X7T3_9ACTO Length = 249 Score = 131 bits (330), Expect = 2e-29, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 75/194 (38%), Gaps = 24/194 (12%) Query: 19 GEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK--QVSSHYLVPA 76 G + + RR + + ++IH T F S++ D Q ++HY+V Sbjct: 76 DYPGATWVAASEANWRRADRPDDFPVDRVIIHVTQGSFASAVKVFQDPAHQAATHYIV-- 133 Query: 77 VPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAP 136 R+ Q++ E ++A+ AG A+ N+ ++GIE E V Sbjct: 134 -----GQDGRVVQMIRELDVAYQAGNRAY------NERAVGIEHEG-------FVDRPKD 175 Query: 137 FEPAQIQALIPLAKDIIARYHIK--PENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAW 194 A + L I AR+ I E+++ H ++ DPGP + W + + A Sbjct: 176 LTKAMYASSARLTASICARHGIPVDREHIIGHVEVPGTDHTDPGPHWDWDRYMELVRRAA 235 Query: 195 PDAQRVNFYLAGRA 208 + + +A Sbjct: 236 TAPPGPSPTPSAKA 249 >UniRef50_A8FVJ2 Negative regulator of beta-lactamase expression-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FVJ2_SHESH Length = 259 Score = 131 bits (329), Expect = 3e-29, Method: Composition-based stats. Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 12/205 (5%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDF-DSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLV 91 R + + + I +VIH TA ++ T +++ S+H+++P +G IW +V Sbjct: 61 ARSRGRDVFESIDTIVIHATAGYATKHAVDTWKERKASAHWIIPDENEAEHGHF-IWAMV 119 Query: 92 PEQELAWHAG----ISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIP 147 E + A+H G S +ND S+G+EL N + P+ QI L Sbjct: 120 AESKAAYHVGNVDYASILGEGLNVNDRSLGVELVNT----QNVQYFRDPYSQWQIDMLAR 175 Query: 148 LAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGR 207 + A+Y ++V++HA + P R+ DPG FPW+ + + +R Sbjct: 176 IVLYAWAKYP-NLKHVISHAKLDPARRSDPGENFPWEAFKHKVLSQSVLNERHPLVFETS 234 Query: 208 APHTPVDTASL-LELLARYGYDVKP 231 A DT SL L + R G+ +P Sbjct: 235 ASSVTSDTDSLNLAVTTRAGHCCEP 259 >UniRef50_D0RN01 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RN01_9RICK Length = 159 Score = 130 bits (327), Expect = 5e-29, Method: Composition-based stats. Identities = 61/155 (39%), Positives = 83/155 (53%), Gaps = 19/155 (12%) Query: 40 AYPRIKVLVIHYTAD-DFDSSLATLTD--KQVSSHYLVPAVPPRYNGKPRIWQLVPEQEL 96 RIK ++IHYT D S++ L +VS HYL+ +++Q+V + ++ Sbjct: 17 KDRRIKYVIIHYTGMRDQKSAIKRLQSKVAKVSCHYLIS-------RGGKVYQMVQDLDV 69 Query: 97 AWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARY 156 AWHAG S W LN SIGIEL N+G++ F QI ALI + K + +Y Sbjct: 70 AWHAGKSKWGKDINLNSKSIGIELVNKGFES---------FPNKQILALIKILKILKKKY 120 Query: 157 HIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGI 191 IKP V+ H DI+P RK DPGP FPW+ L I Sbjct: 121 KIKPSYVLGHEDISPGRKTDPGPKFPWKILYNHKI 155 >UniRef50_A6GR52 Putative anhydro-N-acetylmuramyl-tripeptide amidase, AmpD (Negative regulator of AmpC) n=1 Tax=Limnobacter sp. MED105 RepID=A6GR52_9BURK Length = 187 Score = 130 bits (326), Expect = 7e-29, Method: Composition-based stats. Identities = 52/180 (28%), Positives = 74/180 (41%), Gaps = 38/180 (21%) Query: 32 DTRRQAQAAYPRIKVLVIHYTADD--------------------FDSSLATLTDKQVSSH 71 + A+ + LV+H + +S L VSSH Sbjct: 18 SPNQDARPMGTVVDTLVVHCISLPERGRDSALITDLFLNRLDCHSHASFGELIGLHVSSH 77 Query: 72 YLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGV 131 +L+ + Q V ++ AWHAGISA + N SIGIEL Sbjct: 78 FLID-------RDGSVTQFVSCEKRAWHAGISAAMDRSNFNHFSIGIELLG--------- 121 Query: 132 KYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGI 191 + PFE Q +L LA ++ ARY + +AH++IAP RK DPGP F W+ L + Sbjct: 122 DIYTPFEQTQYASLKRLALELQARY--PLKYAMAHSEIAPTRKTDPGPFFDWKGLRKSNT 179 >UniRef50_C0WQZ5 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC n=3 Tax=Lactobacillus RepID=C0WQZ5_LACBU Length = 604 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 74/212 (34%), Gaps = 38/212 (17%) Query: 36 QAQAAYPRIKVLVIHYTADDFDSSLATL--TDKQVSSHYLVPAVPPRYNGKPRIWQLVPE 93 + +I +VIH T FD + T S++Y++ + + ++V Sbjct: 237 NRPSDGLKINYIVIHNTETTFDEATNLFASTPSYTSANYVISSEQ------GTVAEMVRP 290 Query: 94 QELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDII 153 Q +AWHAG +N SIGIE E + A Q+ L K + Sbjct: 291 QNVAWHAGN------WYINSHSIGIEHEGYAAVGG------YWYTEAMYQSSAALVKYLA 338 Query: 154 ARYHIKPE--NVVAHADIAP-------QRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYL 204 A+Y+I + +++ H ++ DPG + WQ + D VNF Sbjct: 339 AKYNIPLDRQHIIGHDNVPGLTPAAQKTMHWDPGTYWNWQH--------YFDLLGVNFKD 390 Query: 205 AGRAPHTPVDTASLLELLAR-YGYDVKPDMTP 235 + T L G V D Sbjct: 391 SQGTGSIVTITPDPDHNLTADSGQKVTDDGVD 422 >UniRef50_C4KDJ8 Peptidoglycan-binding domain 1 protein n=1 Tax=Thauera sp. MZ1T RepID=C4KDJ8_THASP Length = 274 Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 75/253 (29%), Gaps = 25/253 (9%) Query: 35 RQAQAAYPRIKVLVIHYTADDFDS---SLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLV 91 + ++ +K ++ H+TA SL L + + + P + V Sbjct: 27 NRGRSEMGVVKGVICHHTAGPRSGNMPSLGVLKNGR--ADLAGPLAQLGLGRDGTFY--V 82 Query: 92 PEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKD 151 A HAG W+G T N + IGIE E+ G F P+ Q+ A Sbjct: 83 IAAGRANHAGRGEWKGITDGNGSFIGIEAESTGIG-DPTKPGFEPWPEVQLDAYRRGVAA 141 Query: 152 IIARYHIKPENVVAHADIA--PQRKDDPGPLFPWQQLAQQGIGAWP------------DA 197 I+A H + A RK DP L ++ + DA Sbjct: 142 ILAHLGQDAGMCCGHKEYALPKGRKSDPHTL-DMERFRSEVAALMSGAAAPVPSIPRKDA 200 Query: 198 QRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGE 257 + G + + L +G + FQ + +G Sbjct: 201 EDRPTIRRGATGNPIFLVKEVQRKLG-FGAQQVDGAFGPLTEAAMRRFQRA-HGLVPDGI 258 Query: 258 ADAETQAIAEALL 270 T + + Sbjct: 259 VGPRTWKALDTVA 271 >UniRef50_A1UKT0 Peptidoglycan-binding domain 1 protein n=3 Tax=Mycobacterium RepID=A1UKT0_MYCSK Length = 232 Score = 128 bits (321), Expect = 2e-28, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 76/242 (31%), Gaps = 27/242 (11%) Query: 24 VEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNG 83 VE G+ ++ + I+ +++H+T D ++ + + + P Sbjct: 2 VEHPGWT----QRGHGDFDDIRGVMVHHTGSDTATAASIADGRPDLA---GPLSQLHIAR 54 Query: 84 KPRIWQLVPEQELAWHAGISA--WRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQ 141 + V +AWHAG W A N +IGIE N G + + + AQ Sbjct: 55 DGTVT--VVAAGVAWHAGAGRYRWLPANTGNRHTIGIECANTGTGPT--APHRTNWPDAQ 110 Query: 142 IQALIPLAKDIIARYHIKPENVVAHADIAPQ--RKDDPGPLFPWQQLAQQGIGAWPDAQR 199 AL+ I+ R + H + A K DPG L Sbjct: 111 YLALVRCCAAIMRRLGFGAARTIGHREYAGGVQGKWDPG-AIDLDTLR----------AD 159 Query: 200 VNFYLAGRAPHTPVDTASLLELLARY-GYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEA 258 + + H L RY G+ + E + FQ L +G Sbjct: 160 IQARIGFADAHVAEAQRRLKYAYRRYAGHLEIDGVYGPETEAAVREFQRRTPGLLADGIV 219 Query: 259 DA 260 Sbjct: 220 GP 221 >UniRef50_A6GDD4 Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GDD4_9DELT Length = 574 Score = 127 bits (318), Expect = 5e-28, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 67/178 (37%), Gaps = 28/178 (15%) Query: 29 YQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQ--VSSHYLVPAVPPRYNGKPR 86 ++ + ++++IH + + L++ Q VS+HY++ Sbjct: 228 WRGSPNYSNRPGGTNPEMVIIHSCEGSYSGCWSWLSNSQAGVSAHYVINNSGS------E 281 Query: 87 IWQLVPEQELAWHAGIS----------AWRGATRLNDTSIGIELENRGWQKSAGVKYFAP 136 + QLV E + AWH G S + + N+ +IGIE Q S Sbjct: 282 VSQLVRENKKAWHIGASYNCSLNNSTKCNKNGSSSNNFTIGIEHAGYANQASWSNGL--- 338 Query: 137 FEPAQIQALIPLAKDIIARYHIKPE--NVVAHADIAPQRKDDPGPLFPWQQLAQQGIG 192 I L DI + I + ++VAH + P + DPGP +PW Q Sbjct: 339 -----ITTSAELVCDITQAWGIPRDQYHIVAHGTLQPYNRIDPGPNWPWANYLAQINA 391 >UniRef50_B9XDJ7 N-acetylmuramoyl-L-alanine amidase family 2 n=1 Tax=bacterium Ellin514 RepID=B9XDJ7_9BACT Length = 1809 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 41/234 (17%), Positives = 65/234 (27%), Gaps = 41/234 (17%) Query: 4 FFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAA---YPRIKVLVIHYTADDFDSSL 60 + L+ + A CA G + + + K +VIH + S++ Sbjct: 18 WLKLLVPMFIGASCANMVTASTDYGPAVWRQAYSGHWSTSGYGHKFVVIHDMEGYYASTI 77 Query: 61 ATLTDK--QVSSHYLVPAVPPRYN--GKPRIWQLVPEQELAWHAGISAWRGATRLNDTSI 116 + Q S HY V + Q+V E AWH W N Sbjct: 78 SYFQRSSTQASVHYCVNGKQDSSTDYPAGEVTQMVREAYYAWHV--LCW------NHYCA 129 Query: 117 GIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHI--KPENVVAHADIA---- 170 G E E A + A + L + + Y I ++V H Sbjct: 130 GTEHEGFASNP-------AWYTDAMYNSSGLLQRHLCDHYGIAKDRNHIVGHNAWQSSAW 182 Query: 171 -------------PQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHT 211 DPGP + W +L +G + A + Sbjct: 183 RTYASANFGIDPNCNSHTDPGPYWNWTKLMNVVLGTSSVPSAPSTLAATTVSAS 236 >UniRef50_Q92IC3 Putative N-acetylmuramoyl-L-alanine amidase RC0497 n=9 Tax=Rickettsia RepID=Y497_RICCN Length = 267 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 92/258 (35%), Gaps = 33/258 (12%) Query: 18 AGEKGIVEKEGYQLDTRRQAQAAYPRIKVL-----VIHYTAD-DFDSSLATLTDKQVSSH 71 + +E G + PR + + VI Y+ D + L ++ S H Sbjct: 1 MSKSKAIENNGISNTNSPNGKYMAPRPEGVKPTCVVITYSVSKDIKAVREVLDERGASVH 60 Query: 72 YLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGV 131 Y++ + + A++AG S+W+G +N IG+ L N Sbjct: 61 YIIDKDGTQKEYHN------DLTDQAFYAGKSSWKGEVGVNKFGIGVMLINDAK------ 108 Query: 132 KYFAPFEPAQIQALIPLAKDIIARYHI--KPENVVAHADIAPQR----KDDPGPLFPWQQ 185 + F QI L KD+ RY ++V ++ R PG FPW++ Sbjct: 109 ---SDFPAEQIGKLKEFLKDVTERYPNLDLKHDLVGLGEVTVNREGNAHIAPGSKFPWKE 165 Query: 186 LAQQGIGAWPD-AQRVNFYLAGRAPHTPVDTASLLELLARYGYDV-KPDMTPREQRRVIM 243 LA+ G G + + Q L T +L E L YGY V + ++ + Sbjct: 166 LAEAGFGRYFETTQEQKSKLLLSLDSTGEKVNTLQENLKEYGYGVESTSTFDQFTQQAVR 225 Query: 244 AFQMHFRPTLYNGEADAE 261 F + G + E Sbjct: 226 VFNDRY----GTGLPNEE 239 >UniRef50_Q331X1 Putative N-acetylmuramoyl-L-alanine amidase n=2 Tax=root RepID=Q331X1_CBCP Length = 309 Score = 124 bits (311), Expect = 4e-27, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 77/254 (30%), Gaps = 38/254 (14%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQV-------SSHYLVPAVPPRYNGKP 85 T AQ +VIH T ++ + A + + S+HY V Sbjct: 10 TSHGAQGGANYPTWIVIHETDNEDKGANALCHARALANGNLSCSAHYYVDESN------- 62 Query: 86 RIWQLVPEQELAWHAGISAWRGATRL--NDTSIGIELENRGWQKSAGVKYFAPFEPAQIQ 143 I Q+ + H G+ N SIGIE+ + + Q Sbjct: 63 -IVQVHEHWTVTSHVGVKYGTPPIGGIGNKNSIGIEICVNKDGNYSQAR----------Q 111 Query: 144 ALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFP----WQQLAQQGIGAWPDAQR 199 I L K +I+ I VV H D +K P + W Q G Sbjct: 112 NAIELTKYLISTTKIPASRVVRHYD--ACKKYCPRKMLDSLSLWNDFKSQISGNSQSNPS 169 Query: 200 VNFYLAGRAPHTPVD-TASLLELLARYGYDV--KPDMTPREQRRVIMAFQMHFRPTLYNG 256 VN + D L L + GY + + + +++FQ + +G Sbjct: 170 VNSSSGLLKVGSREDKVKQLQANLNKLGYTCGNADGIFGQGTKNAVISFQRN-NGLSADG 228 Query: 257 EADAETQ-AIAEAL 269 T I L Sbjct: 229 VVGESTWNKILSNL 242 >UniRef50_B3ZYJ5 N-acetylmuramoyl-L-alanine amidase, putative n=1 Tax=Bacillus cereus 03BB108 RepID=B3ZYJ5_BACCE Length = 246 Score = 123 bits (309), Expect = 5e-27, Method: Composition-based stats. Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 34/177 (19%) Query: 36 QAQAAYPRIKVLVIHYTAD---------DFDSSLATLTDKQVSSHYLVPAVPPRYNGKPR 86 ++ I ++IH+ ++ + + + D +S+HYL+ Sbjct: 73 NSKVRTEPITHVLIHFMSNAVAKPKDPYNVKDAYNSFLDNGLSAHYLID-------RNGV 125 Query: 87 IWQLVPEQELAWHAGI---SAWRGATR-LNDTSIGIELENRGWQKSAGVKYFAP------ 136 ++QLV E +A+HAG S + T LN+ SIGIEL G K + Sbjct: 126 VYQLVNENRVAYHAGKGSISNYPEYTNKLNEYSIGIELLGIGTWKEMEIMMSRDTYDLIS 185 Query: 137 -----FEPAQIQALIPLAKDIIARY-HI--KPENVVAHADIAPQRKDDPGPLFPWQQ 185 + Q ++L L +DI R +I E+++ H + A RK DPG LF W + Sbjct: 186 PHNIGYTDVQYKSLKLLLEDIRKRNQNIQNDREHILGHDEYAKDRKTDPGSLFDWSK 242 >UniRef50_Q9FC03 Putative secreted amidase n=2 Tax=Streptomyces RepID=Q9FC03_STRCO Length = 642 Score = 123 bits (309), Expect = 6e-27, Method: Composition-based stats. Identities = 44/192 (22%), Positives = 73/192 (38%), Gaps = 31/192 (16%) Query: 41 YPRIKVLVIHYTADDFDSSLATLTDK--QVSSHYLVPAVPPRYNGKPRIWQLVPEQELAW 98 RI +VIH +D+ +A L + S+HY+ + + Q+VP +++A+ Sbjct: 266 GIRIDTIVIHDLESTYDAGVAGLANPTNPASTHYV-------MSSSGAVTQMVPTKDIAF 318 Query: 99 HAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHI 158 HAG N SIGIE E + A + +Q QA L K + R+ + Sbjct: 319 HAGN------YSTNLHSIGIEHEGFAAHGA------AWYTESQYQATADLVKYLAERFGV 366 Query: 159 KPE--NVVAHADIAP-------QRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAP 209 + +V+ H ++A DPG + W +GA Sbjct: 367 PLDRQHVIGHDNVAGPNSALVAGMHWDPGYAWDWNHFMS-LLGAPVSGLPEVPQPGEVVA 425 Query: 210 HTPVDTASLLEL 221 TP T ++ Sbjct: 426 ITPSFTENVQTF 437 >UniRef50_A7G716 N-acetylmuramoyl-L-alanine amidase n=7 Tax=Clostridium RepID=A7G716_CLOBH Length = 236 Score = 123 bits (308), Expect = 7e-27, Method: Composition-based stats. Identities = 36/259 (13%), Positives = 80/259 (30%), Gaps = 50/259 (19%) Query: 29 YQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLT----DKQVS---SHYLVPAVPPRY 81 + + + + K++++H+ A+ S+ + + S +Y + Sbjct: 4 INPNLKFRGLSYGNNPKMIILHH-AEASGCSIKDIHLWHLNNGWSGCGYNYFIKK----- 57 Query: 82 NGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQ 141 I++ P+ + H N SIGI +E R + G Q Sbjct: 58 --DGAIYKGRPDNAIGAHC--------LSYNGVSIGICMEGRFNVEEMGAD--------Q 99 Query: 142 IQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVN 201 +L L + +Y+I + H ++ + PG FP ++ ++ +G + + Sbjct: 100 YNSLKDLTCYLQNKYNINK--IYGHRELNET--ECPGNNFPLHRIKKECLGGNNSIENSS 155 Query: 202 FYLAGRAPHT----------PVDTASLLELLARYGYDVKPDM----TPREQRRVIMAFQM 247 ++ + + L GY V + FQ Sbjct: 156 NNKGSKSYPGYLLKYNPGRFDANVKLIQSKLQNIGYSVGKYGVDGYFGDGTLLAVKCFQR 215 Query: 248 HFRPTLYNGEADAETQAIA 266 + +G +T Sbjct: 216 D-CNLMIDGIIGVDTWKRI 233 >UniRef50_P54450 N-acetylmuramoyl-L-alanine amidase cwlH n=1 Tax=Bacillus subtilis RepID=CWLH_BACSU Length = 250 Score = 123 bits (308), Expect = 8e-27, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 78/265 (29%), Gaps = 52/265 (19%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQV-------SSHYLVPAVPPRYNGKP 85 + + +H TA+ + A + K V S H+ V Sbjct: 12 SNDNRPGYAMAPAYITVHNTANTAKGADAKMHAKFVKNPNTSESWHFTVD--------DS 63 Query: 86 RIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQAL 145 I+Q +P E WHAG N SIGIE+ AQ Sbjct: 64 VIYQHLPIDENGWHAGDGTNGTG---NRKSIGIEICENADGDFEKAT-----SNAQ---- 111 Query: 146 IPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFP-WQQLAQQGIGAWPDAQRVNFYL 204 L + ++ +I VV H + K+ P L W + D Sbjct: 112 -WLIRKLMKENNIPLNRVVPHKKWSG--KECPRKLLDHWNSFLNGI--SSSDTPPKETSP 166 Query: 205 AGRAPHT----------PVDTASLLELLAR-YGY-------DVKPDMTPREQRRVIMAFQ 246 + P + L + LA + Y + + + + FQ Sbjct: 167 SYPLPSGVIKLTSPYRKGTNILQLQKALAVLHFYPDKGAKNNGIDGVYGPKTANAVKRFQ 226 Query: 247 MHFRPTLYNGEADAETQAIAEALLE 271 + +G +T+A ++ L+ Sbjct: 227 L-MNGLTADGIYGPKTKAKLKSKLK 250 >UniRef50_B4AHH5 N-acetylmuramoyl-L-alanine amidase XlyB (Cellwall hydrolase) (Autolysin) n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AHH5_BACPU Length = 267 Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 79/287 (27%), Gaps = 66/287 (22%) Query: 27 EGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSS-------LATLTDKQVSSHYLVPAVPP 79 + Y R + + +H T++ + + VS HY V Sbjct: 6 QAYIPKHNRNRPGNTMKPLYITVHNTSNTAKGANAGSHAAFVARSSTGVSWHYTVD---- 61 Query: 80 RYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEP 139 I+Q +P E WH G G N SIGIE+ FE Sbjct: 62 ----DQVIYQHLPLNENGWHTGD----GRGNGNMKSIGIEICENTDGN---------FEQ 104 Query: 140 AQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLF-PWQQL------------ 186 A ++ L + ++ I NVV H + K+ P L W Q Sbjct: 105 A-VENAQWLIRKLMGDLGIPLSNVVPHKHWSG--KECPRKLLGRWDQFKAGIATARTGSK 161 Query: 187 -------------AQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLAR-YGY----- 227 + ++ + L+ Y Y Sbjct: 162 STRKPVRTESLSHKAPVTKQKSSNLPSGILKITKPLTKGPQVIAVQKALSSLYFYPDKGA 221 Query: 228 --DVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEK 272 + + + FQ+ +G +T+ E LL+K Sbjct: 222 KNNGIDGYYGSKTANAVKRFQL-MNGLAADGIYGPKTKNKIERLLKK 267 >UniRef50_A6T2C3 Negative regulator of beta-lactamase expression n=2 Tax=Oxalobacteraceae RepID=A6T2C3_JANMA Length = 211 Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats. Identities = 50/157 (31%), Positives = 67/157 (42%), Gaps = 18/157 (11%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVP 92 + Q P I L ++ + D L +VS+H+L+ + Q V Sbjct: 51 SLPPGQFGGPFIADLFLNRLDYEADPYFDQLRPLRVSAHFLIR-------RDGTVMQFVS 103 Query: 93 EQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDI 152 + AWHAG S++ G R ND SIGIELE F F Q AL L + Sbjct: 104 ANDRAWHAGASSFCGQERCNDFSIGIELEGTD---------FEAFADEQYAALAALTVAL 154 Query: 153 IARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQ 189 A Y + +V H IAP RK DPGP F W ++ Sbjct: 155 KAAYPLL--HVTGHEHIAPGRKTDPGPFFDWAGYEER 189 >UniRef50_A4WS28 N-acetylmuramoyl-L-alanine amidase, family 2 n=2 Tax=Rhodobacteraceae RepID=A4WS28_RHOS5 Length = 290 Score = 122 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 49/207 (23%), Positives = 80/207 (38%), Gaps = 46/207 (22%) Query: 44 IKVLVIHYTA-----DDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAW 98 +++++H TA + LA+ + VS H++V + Q VP A Sbjct: 25 PEIVILHDTASRITKGSAATYLASAPN-GVSVHFVV-------EIDGTVVQQVPTNRRAG 76 Query: 99 HAGISAWRGATRLNDTSIGIELENRG----------------------------WQKSAG 130 HAG S++ G T ND SIGIE+ N G G Sbjct: 77 HAGKSSFHGRTGCNDFSIGIEIVNPGRMTRLSDAQCAAWYGETFATNLFGIREVETPQHG 136 Query: 131 VKYFAPFEPAQIQALIPLAKDIIARYHIK-PENVVAHADIAPQRKDDPGPLFPWQQLAQQ 189 + P+ AQ+ A++ L + + I ++ H ++P RK D PLFP + + + Sbjct: 137 RGLWMPYPEAQMTAVLDLLRSLFD--GIPTLRDITTHWYVSPGRKVDTNPLFPLEHVRAR 194 Query: 190 GIGA--WPDAQRVNFYLAGRAPHTPVD 214 +G DA+ F A + Sbjct: 195 ILGRDDPADAEAEAFSEAVKPTARDPR 221 >UniRef50_B4VXL7 Putative peptidoglycan binding domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VXL7_9CYAN Length = 406 Score = 121 bits (303), Expect = 3e-26, Method: Composition-based stats. Identities = 49/269 (18%), Positives = 84/269 (31%), Gaps = 42/269 (15%) Query: 27 EGYQLDTRRQAQ-AAYPRIKVLVIHYTADDFDS---------SLATLTDKQVSSH----- 71 + D R Q A R + ++IH+TA T T ++H Sbjct: 9 STKEWDARPPRQWAGETRPQYIIIHHTATPNPPNDVSRGTLTGAKTFTRSIQTAHVDGFG 68 Query: 72 YLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLN--DTSIGIELENRGWQKSA 129 ++ + + A G S N + S GIE E Sbjct: 69 WIDSGHNFLNTTGGYLLEGRHGSLTAAKQGRSVRSSHAGSNKGNQSPGIENEGTFITYQ- 127 Query: 130 GVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPW-----Q 184 Q +L+ L I + I P+N++ H D +P PG W Sbjct: 128 -------MNAKQWDSLVELCASICSTTKINPDNILGHRDFSPT--QCPG---DWLYSQLP 175 Query: 185 QLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKP--DMTPREQRRVI 242 +L Q+ +F R T + L ++L+ G++ P + + Sbjct: 176 RLRQEVR----QRLGASFIEVLREGDTGLRVKELQQILSAQGFNPGPIDGIFGAGTEDAV 231 Query: 243 MAFQMHFRPTLYNGEADAETQAIAEALLE 271 + FQ F +G T + E + + Sbjct: 232 VLFQ-KFYGLEPDGLVGPNTWKVLERVSQ 259 Score = 46.9 bits (110), Expect = 7e-04, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 29/72 (40%), Gaps = 3/72 (4%) Query: 197 AQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKP--DMTPREQRRVIMAFQMHFRPTLY 254 Q + +L + + E+L + G+D P + + + ++AFQ + Sbjct: 333 NQPLEPFLPLQEGSVGSQVKQVQEVLQQEGFDPGPADGIYGAKTKAAVIAFQRS-KGMTA 391 Query: 255 NGEADAETQAIA 266 +G A T ++ Sbjct: 392 DGIVGAVTWSVL 403 >UniRef50_Q5WIB6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WIB6_BACSK Length = 301 Score = 120 bits (302), Expect = 4e-26, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 86/261 (32%), Gaps = 52/261 (19%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK----------QVSSHYLVPAVPPRYN 82 + + +H T + + A + + +VS HY V Sbjct: 11 SASNRPGDRLNPTHITVHETGNTSKGADAAMHARYIKGADARARKVSWHYTVD------- 63 Query: 83 GKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQI 142 +I Q VP+ E AWHAG N SIG+E+ K Sbjct: 64 -DKQIIQHVPDNERAWHAGSG--------NAKSIGVEICVNSDGNFEKAKS--------- 105 Query: 143 QALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLF-PWQQLAQQGIGAWPDAQRVN 201 L ++++++++I NVV H K+ P L W Q DA +V Sbjct: 106 -NAAWLLRNLMSKHNISLSNVVTHKYWTG--KNCPARLLKEWNAFKQLISNE--DAPQVG 160 Query: 202 FYLAGRAPHTPVD----TASLLELLARYGYDVKPDMT-PREQ-RRVIMAFQ----MHF-R 250 + P S+ + + YGY + D E R +I +Q F Sbjct: 161 GIIVEDKPKAKPSGDAYIRSIQQWVVNYGYKIAVDGLKGPETKRGLIRVYQNELNKQFGA 220 Query: 251 PTLYNGEADAETQAIAEALLE 271 +G A+T A + + Sbjct: 221 GLSVDGIPGAKTYNAARNVRK 241 Score = 40.4 bits (93), Expect = 0.063, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 24/74 (32%), Gaps = 3/74 (4%) Query: 195 PDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKP--DMTPREQRRVIMAFQMHFRPT 252 P A+ N R T L LL G++ P + + + AFQ + Sbjct: 228 PGAKTYNAARNVRKGAKGNLTRVLQALLYMAGHNPGPFDGVFGNGTEKAVRAFQRD-KGL 286 Query: 253 LYNGEADAETQAIA 266 +G A T Sbjct: 287 GVDGIAGKNTWRAL 300 >UniRef50_Q1QZ97 Negative regulator of AmpC, AmpD n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZ97_CHRSD Length = 197 Score = 120 bits (301), Expect = 5e-26, Method: Composition-based stats. Identities = 49/161 (30%), Positives = 63/161 (39%), Gaps = 21/161 (13%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVP 92 + + I+ L + AT+ +VS+H L+ Q V Sbjct: 37 SLPPGRFGGDAIERLFTNRLDPAAHPYFATIHALRVSAHVLIR-------RDGEAVQFVG 89 Query: 93 EQELAWHAGISAW----RGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPL 148 AWHAG S W R LND SIGIELE + AQ + L + Sbjct: 90 FDRRAWHAGRSRWWDGHRERRELNDFSIGIELEG---------DEIHAYREAQYRCLARV 140 Query: 149 AKDIIARYH-IKPENVVAHADIAPQRKDDPGPLFPWQQLAQ 188 + ARY + V +HA IAP RK DPGP F W Q Sbjct: 141 FLALHARYPALTLARVTSHARIAPLRKTDPGPAFDWAYFRQ 181 >UniRef50_A6GHP2 Putative amidase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHP2_9DELT Length = 454 Score = 119 bits (299), Expect = 8e-26, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 55/161 (34%), Gaps = 26/161 (16%) Query: 45 KVLVIHYTADDFDSSLATLTDK--QVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGI 102 + +H + + + VS+H++V + + Q+V + AWH G Sbjct: 54 DYITVHTVQGSYTGCQSWFQNPAANVSAHFVVRSD------DGEVTQMVELADRAWHVGG 107 Query: 103 SAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIK--P 160 S N +IGIE E + A + + L + I Sbjct: 108 S--------NAYAIGIEHEG-------WIDEPAWYTWEMYVSSSQLTRWTADELDIPKNR 152 Query: 161 ENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVN 201 +++V H ++ Q DPG + W L + W + Sbjct: 153 DHIVGHVELPNQSHTDPGIHWNWD-LYMALVNDWVGEGTIE 192 >UniRef50_B8FYR6 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=5 Tax=Desulfitobacterium hafniense RepID=B8FYR6_DESHD Length = 242 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 27/174 (15%) Query: 26 KEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK--QVSSHYLVPAVPPRYNG 83 K + + + ++ ++ H TA + L+ + + Q SSHYLV Sbjct: 2 KIEWVGTPNYRQGRSGNQVFAIINHITAGRYPGCLSWMQNPASQASSHYLVLK------- 54 Query: 84 KPRIWQLVPEQELAWHAG---ISAWR--GATRLNDTSIGIELENRGWQKSAGVKYFAPFE 138 RI QLV +++ AWHAG W+ N +IGIE E + Sbjct: 55 DGRILQLVKDEDTAWHAGLVNKPNWKLYNGKNPNLYTIGIEHEALEGEG---------LT 105 Query: 139 PAQIQALIPLAKDIIARYH-IKP--ENVVAHADI-APQRKDDPGPLFPWQQLAQ 188 AQ Q+ + L ++A++ IKP ++++ H + R +DPG FPW+QL + Sbjct: 106 DAQYQSTLWLHGQLLAKFPAIKPDSDHIIGHYRTDSVNRPNDPGAKFPWEQLFK 159 >UniRef50_UPI00016C05EA N-acetylmuramoyl-L-alanine amidase n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C05EA Length = 197 Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats. Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 36/176 (20%) Query: 24 VEKEGYQLDTRRQAQAAYP--RIKVLVIHY------TADDFDSSLATLTDKQVSSHYLVP 75 V K Y LD ++ +P +I +V+HY TA++ +LT++ SSHY+V Sbjct: 31 VPKILYPLDPNPMSRPGFPMEKISGIVVHYVNNPGSTAENNRDYFNSLTERYASSHYIVG 90 Query: 76 AVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFA 135 I VPE+E+A+HAG +N + IGIE+ + F Sbjct: 91 LQ-------GEIILCVPEEEVAYHAGN------RNVNYSHIGIEVCHP--------DTFG 129 Query: 136 PFEPAQIQALIPLAKDIIARYHIKP-ENVVAHADIAPQRKDDPGPLF----PWQQL 186 F +LI L K + +Y + P +V+ H D+ K P W + Sbjct: 130 KFSDITYNSLIDLTKQLCRKYKLNPQTDVIRHYDV--TEKLCPAYYVHNQEAWDKF 183 >UniRef50_P36550 N-acetylmuramoyl-L-alanine amidase cwlL n=4 Tax=Bacillus licheniformis RepID=CWLL_BACLI Length = 360 Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 79/262 (30%), Gaps = 53/262 (20%) Query: 44 IKVLVIHYTADDFDSSLAT----------LTDKQVSSHYLVPAVPPRYNGKPRIWQLVPE 93 +K +V+HYTA S+L + K S+HY V + ++PE Sbjct: 24 VKGIVMHYTATPGASALNERDYFNGTCIAIKRKASSAHYFVDRKEAQ--------HIIPE 75 Query: 94 QELAWHAGISAWRGAT----RLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLA 149 E+A+HA + N SI +E+ +Q L Sbjct: 76 NEVAYHAHDKNRCYVSFLKPNANTKSISVEMCVEKDGMIHS---------ETVQNAAELV 126 Query: 150 KDIIARYHIKPENVVAHADIAPQRKDDPGPLF----PWQQLAQQG---IGAWPDAQRVNF 202 D+ RY + +V H D+ K P P ++ +G ++ + Sbjct: 127 ADLCKRYGLSTNKIVRHYDV--TNKICPAPWVSDSSQLTTFRKKVDSLLGNKTVSKTTSS 184 Query: 203 YLAG--------RAPHTPVDTASLLELLARYGYDVKPDMTPREQRR----VIMAFQMHFR 250 + + +L + L G+ + + A Q Sbjct: 185 TSQSSKSTGTILKKGASGSQVKALQKRLIAAGFSLPKYGADGSYENETVQAVKALQKK-A 243 Query: 251 PTLYNGEADAETQAIAEALLEK 272 +G T+ A+ K Sbjct: 244 GIAVDGIYGPATEKALAAIGAK 265 >UniRef50_A5GTP3 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Synechococcus sp. RCC307 RepID=A5GTP3_SYNR3 Length = 297 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 74/185 (40%), Gaps = 25/185 (13%) Query: 25 EKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK------QVSSHYLVPAVP 78 G ++ Q Q P V+V+H T S++ T T Q S H LV Sbjct: 118 TNYGERVHLDAQGQRIDPTPAVIVLHETVYSLGSAINTFTTPHPNDADQASYHTLV---- 173 Query: 79 PRYNGKPRIWQLVPEQELAWHAGISAWRGA---------TRLNDTSIGIELENRGWQKSA 129 K I Q+V + A+ AG SA+ G LN+ ++ + LE ++ Sbjct: 174 ---GQKGEIVQVVDPSKRAYGAGHSAFDGRWVFTSKHFSGSLNNFALHVSLETPPDGATS 230 Query: 130 GVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIA-PQRKDDPGPLFPWQQLAQ 188 K+ + PAQ AL + D + RY I+P + H + + DP F WQQL Sbjct: 231 AQKHSG-YTPAQYDALSRVLADWMVRYKIEPHAITTHRHVDLGNARSDP-RSFDWQQLQT 288 Query: 189 QGIGA 193 + Sbjct: 289 RLTAL 293 >UniRef50_D2AX66 Negative regulator of beta-lactamase expression-like protein n=12 Tax=Actinomycetales RepID=D2AX66_STRRD Length = 646 Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 65/186 (34%), Gaps = 31/186 (16%) Query: 16 GCAGEKGIVEK--EGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK--QVSSH 71 C + + + + +I +VIH F S+ + + S H Sbjct: 254 SCEWIPAPYQALPDDDYGNHDLSNRPWNQKIDYIVIHDMEGYFGPSVDLVQNPARPASWH 313 Query: 72 YLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGV 131 Y + I Q + +++ W AG +N SIG+E E + + Sbjct: 314 Y------SLRSSDGHIAQHLKTKDVGWQAGN------WYVNAKSIGLEHEGFLGEGA--- 358 Query: 132 KYFAPFEPAQIQALIPLAKDIIARYHIKPE--NVVAHADIAP-------QRKDDPGPLFP 182 A + A + L + + R+ + + +++ H ++ +DPGP + Sbjct: 359 ---AWYTEAMYRTSAKLVRYLAMRHGVPLDRAHIIGHDNVPGTLPTTVRGMHEDPGPFWD 415 Query: 183 WQQLAQ 188 W + + Sbjct: 416 WARYFE 421 >UniRef50_A0Q0S8 N-acetylmuramoyl-L-alanine amidase cwlL (Cellwall hydrolase) (Autolysin) n=7 Tax=Clostridiales RepID=A0Q0S8_CLONN Length = 431 Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats. Identities = 60/295 (20%), Positives = 89/295 (30%), Gaps = 81/295 (27%) Query: 34 RRQAQAAYPRIKVLVIHYTADDFDSSLATLT-----DKQVSSHYLVPAVPPRYNGKPRIW 88 ++ IK +V+H T + D++LA ++ S+HY V I Sbjct: 162 SNYNHSSGNNIKFIVMHDTGNYKDTALANANYFGGGNRNASAHYFVDENN--------IV 213 Query: 89 QLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPL 148 Q+V + AWH G N SIGIE+ N G + A I + L Sbjct: 214 QVVEDSNAAWHCGDGH-GNYGITNHNSIGIEMCNSGGYIA----------DATINNALWL 262 Query: 149 AKDIIARYHIKPENVVAHADIAPQRKDDP----------------------GPLFP---- 182 K + A+Y+I +NVV H D RK+ P G P Sbjct: 263 VKKLQAKYNIDNDNVVRHYD--ASRKNCPANMSTNNWAKWWVFKSRLTDNKGVTLPSISN 320 Query: 183 ---WQ-----------------QLAQQGI-GAWPDAQRVNFYLAGRAPHTPVDTASLLEL 221 W+ Q + W +N T + E Sbjct: 321 VPLWKLCINGKIVERLQHELNTQFHARIKEDGWFGDTTLNKCCIVTQGAKGNITKIIQER 380 Query: 222 LARYGYDV----KPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEK 272 L GY V ++ Q +G +T AL +K Sbjct: 381 LIDKGYSVGKWGADGSFGSGTYDAVVKLQ-KDNSLSADGIVGKDTW---RALFKK 431 >UniRef50_A3TR75 Putative amidase n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TR75_9MICO Length = 634 Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 68/198 (34%), Gaps = 27/198 (13%) Query: 25 EKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLT-----DKQVSSHYLVPAVPP 79 ++ + I LV+H T +D + ++ VS HY V + Sbjct: 251 PAVTQYVNYDLADREKDLSIDYLVVHNTECTYDVCTKLIKGEAEPNRFVSWHYTVRSN-- 308 Query: 80 RYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEP 139 + Q V + +A HAG LN S+G+E E + + + Sbjct: 309 ----DGHVDQHVATRNVAAHAGN------WYLNMHSVGVEHEGKAGEPG------TWYTE 352 Query: 140 AQIQALIPLAKDIIARYHI--KPENVVAHAD-IAPQRKDDPGPLFPWQQLAQQGIGAWPD 196 A ++ L + A+ I ++V H + ++ K DPGP + W+ +GA Sbjct: 353 ALYRSSAELVTYLAAQKGIELDRAHIVGHEEFMSSNYKWDPGPYWDWEHYM-ALLGAPIR 411 Query: 197 AQRVNFYLAGRAPHTPVD 214 R D Sbjct: 412 PDRRGPSQVFTVKPGFTD 429 >UniRef50_D1SBP4 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1SBP4_9ACTO Length = 677 Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 67/217 (30%), Gaps = 33/217 (15%) Query: 16 GCAGEKGIVEK----EGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTD-KQVSS 70 C E+ G + + +I+ +VIH T F S+ + + Sbjct: 267 ACEWIPAPYEQLSDDPGDYGNHDLGDRPKQQKIEYIVIHDTEGYFGPSVDLVKRADYLGW 326 Query: 71 HYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAG 130 HY + I Q + +++ WHAG +N SIG+E E Q Sbjct: 327 HY------TLRSVDGYIAQHIKTKDVGWHAGN------WYVNAKSIGLEHEGFAGQG--- 371 Query: 131 VKYFAPFEPAQIQALIPLAKDIIARYHIKPE--NVVAHADIA-------PQRKDDPGPLF 181 + A + L + + + I + +++ H ++ DPGP + Sbjct: 372 ----TWYTEAMYRTSAKLVRHLALKLGIPMDRQHIIGHDNVPGINAGAVGGMHWDPGPYW 427 Query: 182 PWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASL 218 W + L P + + Sbjct: 428 DWSHYFDLMKAPFRSTGTPRTGLVTIDPDFATNRPAF 464 >UniRef50_C4DKK4 Negative regulator of beta-lactamase expression n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DKK4_9ACTO Length = 637 Score = 117 bits (293), Expect = 4e-25, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 77/216 (35%), Gaps = 32/216 (14%) Query: 17 CAGEKGIVEKEGYQL----DTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHY 72 C EK G + + + + I LVIH T + ++L + D Sbjct: 249 CEWIPAPYEKYGEKPVDYGNHDQANRPKDMDIDYLVIHDTETSYTNTLRLVQDP-----T 303 Query: 73 LVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVK 132 V + + Q V +++AW AG +N S+G+E E + S Sbjct: 304 YVSWQYTLRSFDGHVAQHVKSEDVAWQAGN------WSVNAHSMGLEHEGVAAEGS---- 353 Query: 133 YFAPFEPAQIQALIPLAKDIIARYHIK--PENVVAHADIAP-------QRKDDPGPLFPW 183 F A ++ L K + ++ I ++++ H ++ D GP + W Sbjct: 354 ---WFTEAMYRSSAKLVKYLSKKFDIPLNRDHIIGHDNVPGTAPAKIAGMHWDTGPFWDW 410 Query: 184 QQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLL 219 Q +GA + + + AP +T ++ Sbjct: 411 QHYFD-LLGAPLEPGDGDNGVVMVAPDFDTNTPEMI 445 >UniRef50_Q0AY32 Negative regulator of beta-lactamase expression-like protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AY32_SYNWW Length = 222 Score = 117 bits (293), Expect = 4e-25, Method: Composition-based stats. Identities = 42/203 (20%), Positives = 78/203 (38%), Gaps = 26/203 (12%) Query: 26 KEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK--QVSSHYLVPAVPPRYNG 83 K ++ A + +V H TA +L+ L + +VS+H+L+ Sbjct: 8 KIEWKGTANFSAGRRGRKPIAIVNHITAGLLPGALSWLQNPASRVSTHFLIS-------R 60 Query: 84 KPRIWQLVPEQELAWHAGISAWRG-----ATRLNDTSIGIELENRGWQKSAGVKYFAPFE 138 + +I+QLV E++ AW GI + N ++ IE E Sbjct: 61 QGQIFQLVKEEDTAWANGIVNQPNWVLYDGSNPNFYTLSIEHEALAGDS---------LS 111 Query: 139 PAQIQALIPLAKDIIARYHI--KPENVVAHADI-APQRKDDPGPLFPWQQLAQQGIGAWP 195 Q QA + L + +++R++I E+++ H I + R + PG FPW++L G Sbjct: 112 EEQYQASLCLHRLLVSRFNIAVDEEHIIGHYRIDSINRSNCPGSRFPWKRLFSDLKGEKE 171 Query: 196 DAQRVNFYLAGRAPHTPVDTASL 218 + + + Sbjct: 172 ETGEMPEKWKTELMKEAKKLGLI 194 >UniRef50_C6JDZ2 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDZ2_9FIRM Length = 253 Score = 117 bits (292), Expect = 6e-25, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 82/262 (31%), Gaps = 47/262 (17%) Query: 30 QLDTRRQAQA---AYPRIKVLVIHYTADDFDSSLATLTD--------KQVSSHYLVPAVP 78 ++ + ++ + + +VIH T + + A S+H V Sbjct: 2 NINQQYISERNSYSGQIPRYIVIHNTDNYSTGADARAHAMAQYHGNFDGYSAHVYVD--- 58 Query: 79 PRYNGKPRIWQLVPEQELAWHAGISAWRGA---TRLNDTSIGIELENRGWQKSAGVKYFA 135 +Q +P AWH G+ + G T N S+GIE+ V+ Sbjct: 59 -----DKSAYQAMPYSRGAWHVGV-NYGGRLFGTVNNRNSVGIEMC---------VQAGF 103 Query: 136 PFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPG---PLFPWQQLAQQGIG 192 ++ A + + +++ +I + VV H D+ K+ P W + + G Sbjct: 104 DYDKA-FANTAEVCRQLMSELNIPADRVVQHYDVCA--KNCPSAIRAKNDWNRFKKLIQG 160 Query: 193 AWPDAQRVNFYLAGRAPHTPVD--------TASLLELLARYGYDVKPDMTPREQRRVIMA 244 + V T + +++L + + E + Sbjct: 161 KEKENSPSGGKEITLTEELRVIFPELSRGCTGTAVKMLQVFLQVQADGIFGTETENALRT 220 Query: 245 FQMHFRPTLYNGEADAETQAIA 266 FQ + L +G + Sbjct: 221 FQKNTNQ-LADGICGRNSWMAI 241 >UniRef50_B3QCK8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Rhodopseudomonas palustris TIE-1 RepID=B3QCK8_RHOPT Length = 464 Score = 117 bits (292), Expect = 6e-25, Method: Composition-based stats. Identities = 55/241 (22%), Positives = 84/241 (34%), Gaps = 58/241 (24%) Query: 24 VEKEGYQLDTRRQAQAAYPR-IKVLVIHYTADDFDS--SLATL-----TDKQVSSHYLVP 75 + ++G ++ ++ P KV+V+H TA S+ L + S+H ++ Sbjct: 10 IYRDGKAVNFQQTKNIGGPIVPKVIVLHDTAGHLHGRDSIVWLRGGPGQSQNSSAHVVI- 68 Query: 76 AVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGW---------- 125 I QL WHAGIS WRG LN ++GIE+ N G Sbjct: 69 ------GRDGTITQLAAFNVKTWHAGISNWRGRANLNGWAVGIEIVNPGGPLRTLGNGRY 122 Query: 126 -----------------------------QKSAGVKYFAPFEPAQIQALIPLAKDIIARY 156 Y+ P QI A++ L + ++A Y Sbjct: 123 QGIDLIDTKADPSLKVRPGVFPPLTPDGKAVPRTAGYWLEHSPEQIDAVVELCRALVAAY 182 Query: 157 HIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTA 216 +V H IAP RK D PLFP ++ ++ WP VD Sbjct: 183 P-TITEIVTHWMIAPTRKVDTNPLFPIDEVRRRV---WPARLVSPVAKFADLDDEAVDAI 238 Query: 217 S 217 + Sbjct: 239 A 239 >UniRef50_C5T4Q5 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4Q5_ACIDE Length = 230 Score = 116 bits (291), Expect = 8e-25, Method: Composition-based stats. Identities = 52/191 (27%), Positives = 76/191 (39%), Gaps = 18/191 (9%) Query: 36 QAQAAYPRIKVLVIHYTADDFDS---SLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVP 92 ++ I+ +VIH TA S S+ D S H+LVP +G +W P Sbjct: 41 RSVDPIYGIRAVVIHATAGTSSSGAISVMKRRDDPASFHWLVPDEDEAQHGH-LVWACAP 99 Query: 93 EQELAWHAGISA-----WRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIP 147 E AWH +A GA R+N S+GIE+ N PF QI+A Sbjct: 100 EALAAWHVRNAASHPDVNGGAGRVNHWSLGIEVVNAQKND--------PFSDWQIEATAR 151 Query: 148 LAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGR 207 + + A+Y ++VV+HA + P R+ DPG F W + + D A Sbjct: 152 IVRYCWAKYP-NLKHVVSHAKLDPGRRSDPGEHFDWLRFKSLVLVGGNDELPALVAQATP 210 Query: 208 APHTPVDTASL 218 +S Sbjct: 211 LSRLRSPASSP 221 >UniRef50_C1D367 Putative bifunctional protein, : N-acetylmuramoyl-L-alanine amidase; Muramoylpentapeptide carboxypeptidase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D367_DEIDV Length = 359 Score = 116 bits (290), Expect = 9e-25, Method: Composition-based stats. Identities = 53/298 (17%), Positives = 85/298 (28%), Gaps = 46/298 (15%) Query: 1 MRRFFWLVAAALLLAGCAGEKGIVE--------KEGYQLDTRRQAQAAYPR--------- 43 + R+ L+ + LLA C + + + + +A PR Sbjct: 10 LLRWGALLGGSTLLASCGLQAPPMADLPLNTQAVTAPSISSTSTWKAQAPREAITLLSAR 69 Query: 44 IKVLVIHYTAD------DFDSSLATLTDKQVSSHY----LVPAVPPRYNGKPRIWQLVPE 93 +++H+TA + Q S H+ + + + + Sbjct: 70 PTRIIVHHTASANVTDYSQAQAFTLARSIQQS-HFDRGWIDSGQQFTISRGGYVVEGRHR 128 Query: 94 QELAWHAGISAWRGAT--RLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKD 151 A G RGA ND ++GIE E S Q AL+ L Sbjct: 129 SLEAAQGGTHHVRGAHCDGFNDVAVGIENEGTYMTVSP--------PAGQYSALVSLCAW 180 Query: 152 IIARYHIKPENVVAHADIAPQRKDDPGPLF--PWQQLAQQGIGAWPDAQRVNFYLAGRAP 209 + Y I + H D PG L QL + V + R+ Sbjct: 181 LCQHYGIPATELYGHRDFNTT--ACPGDLLYGQLPQLRRDVATRL--GVTVRIWPTTRSG 236 Query: 210 HTPVDTASLLELLARYGYDVKPDM-TPREQRRVIMAFQMHFRPTLYNGEADAETQAIA 266 T S LL +G + D + AFQ +G + T Sbjct: 237 QTGERVRSAQRLLVSHGQSLTADGSYGPATASAVSAFQSG-AGLTPDGVIGSATWERL 293 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 25/88 (28%), Gaps = 7/88 (7%) Query: 187 AQQGIGAWPDAQRVNFYLAG-----RAPHTPVDTASLLELLARYGYDVKPDM-TPREQRR 240 Q G G PD + R + + LA GY V D Sbjct: 273 FQSGAGLTPDGVIGSATWERLIRTVRRGDSGPAVQAAQGQLAARGYGVTADGVFGAGTES 332 Query: 241 VIMAFQMHFRPTLYNGEADAETQAIAEA 268 + +FQ R +G T E+ Sbjct: 333 AVRSFQSS-RGLTSDGIVGPNTWHALES 359 >UniRef50_Q2SEW1 Negative regulator of beta-lactamase expression n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SEW1_HAHCH Length = 199 Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 56/175 (32%), Gaps = 29/175 (16%) Query: 29 YQLDTRRQAQAAYPRIKVLVIHYTADDF---DSSLATLTDKQVSSHYLVPAVPPRYNGKP 85 + + I+ ++IH T ++L T S+HY+V N + Sbjct: 24 WSPAANFRIPPGRRDIRYIIIHITGGPALTERNALNTFRAGPASAHYIV-------NREG 76 Query: 86 RIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQAL 145 R+ Q V E +A H + N SIGIE N AQ A Sbjct: 77 RVVQTVREAHIANHVDNIHSQ----TNRESIGIEHVNP-----WDPNPRTYPTDAQYMAS 127 Query: 146 IPLAKDIIARYHIKPEN--------VVAHADIAP--QRKDDPGPLFPWQQLAQQG 190 L + RY I + + H + AP + P P + W Sbjct: 128 ARLVAWLCHRYGIPVRHETAPHTAGIRGHIEEAPHSGHRTCPNPAWNWDLYIDLV 182 >UniRef50_B1TGB7 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=Burkholderia ambifaria RepID=B1TGB7_9BURK Length = 1030 Score = 115 bits (289), Expect = 1e-24, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 71/260 (27%), Gaps = 43/260 (16%) Query: 8 VAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIH-YTADDFDSSLATLTD- 65 A+AL L D I ++IH + T T+ Sbjct: 216 TASALALGARENSLVTRTAASPNFDE----GRGSKTIDRIIIHIADVPTIQHVVNTFTNA 271 Query: 66 -KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRG 124 +VSSHYLV + Q V E + AWH S N SIGIE Sbjct: 272 ASKVSSHYLVGQA-------GEVVQFVSEADTAWHCKGS--------NQRSIGIEHIAVK 316 Query: 125 WQKSAGVKYFAPF--------EPAQIQALIPLAKDIIARY--HIKPENVVAHA--DIAPQ 172 + + Q + L + +Y I ++ H D + Sbjct: 317 RGGADYPRRNGTVQHFDALAPTQLQYETSAALVASLCDKYQLPINRTTIMGHREADTSTG 376 Query: 173 RKDDPGPLFPWQQLAQQGIGA--WPDAQRVNFYLAGRAPHTPVDTASLLELLA------R 224 P + W + P A A R + + L+ Sbjct: 377 HTACPDGNWDWDYFMRLVNSRTCQPQAAGQALGFAARGLGDDIPLDPGVGGLSIGTDALE 436 Query: 225 YGYDVKPDMTPREQRRVIMA 244 G D+ T VI A Sbjct: 437 IG-DIILSTTGNSGSGVIRA 455 >UniRef50_B5U5V5 Gp50 n=12 Tax=unclassified Siphoviridae RepID=B5U5V5_9CAUD Length = 438 Score = 115 bits (287), Expect = 2e-24, Method: Composition-based stats. Identities = 46/293 (15%), Positives = 72/293 (24%), Gaps = 68/293 (23%) Query: 25 EKEGYQLDTRRQAQAAYPRIKVLVIHY-----TADDFDSSLATLTDKQVSSHYLVPAVPP 79 G R + +V+H TA D + LA QVS H +V Sbjct: 163 PFTGELWSPNRYHPRGLGDPRWIVVHTQEGGRTARDLAAYLAQ-KSSQVSYHVVVD---- 217 Query: 80 RYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEP 139 + ++V E + W A N + I + S Sbjct: 218 ----DREVLKVVAEGDAPWAAA--------GANKYAFHICMAGSYASWSRNKWLDVDTSD 265 Query: 140 A-----QIQALIPLAKDIIARYHIKP-------------ENVVAHADIA--PQRKDDPGP 179 Q+ + +Y I P + V H D+ DPGP Sbjct: 266 GKNEDLQLTKTAHVIAWWCDKYGIPPVWIGGRNIPPWGLDGVCGHVDLGAWGGGHTDPGP 325 Query: 180 LFPWQQLAQQG--------------------IGAWPDAQRVNFYLAGRAPHTPVDTASLL 219 FP +L ++ G PD G + + Sbjct: 326 NFPRDELMRRVSQFLAGTELPPLPTPPPVTVPGTKPDQYGDWMLYRGNPRNDADRVRRVQ 385 Query: 220 ELLAR-----YGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAE 267 L G+ + FQ + +G T A + Sbjct: 386 RRLKAAYRSYAGHLEIDGDFGPLTELAVREFQRR-SLLIADGIVGPNTAAALK 437 >UniRef50_D2AYL5 Negative regulator of beta-lactamase expression-like protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AYL5_STRRD Length = 666 Score = 113 bits (282), Expect = 9e-24, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 61/187 (32%), Gaps = 34/187 (18%) Query: 15 AGCAGEKGIVEK---EGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK-QVSS 70 C + Y R RI +VIH +D+ + +S Sbjct: 275 VSCEWMPAAYRRLKNGDYGNHDRYDGPR---RIDYIVIHDGESSYDAITRLTRNPTYLSW 331 Query: 71 HYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAG 130 H+ +G I Q + ++ WHAG +N SIG+E E Sbjct: 332 HF------TLRSGDGHIAQHLRGSDIGWHAGN------WYVNTRSIGLEHEGY------L 373 Query: 131 VKYFAPFEPAQIQALIPLAKDIIARYHIK--PENVVAHADIAPQR-------KDDPGPLF 181 K A + A ++ L + +Y + +++ H ++ DPGP + Sbjct: 374 AKGGAWYTEAMYRSSAALVAHLARKYGVPLNRAHIIGHDNVPGTTPEGVRDMHQDPGPYW 433 Query: 182 PWQQLAQ 188 W + Sbjct: 434 DWAHYFE 440 >UniRef50_Q7V7M8 N-acetylmuramoyl-L-alanine amidase (Family 2) n=2 Tax=Prochlorococcus marinus RepID=Q7V7M8_PROMM Length = 312 Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 71/187 (37%), Gaps = 25/187 (13%) Query: 25 EKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTD------KQVSSHYLVPAVP 78 G + + P V+++H T D + S+L D QVS H L+ Sbjct: 126 SNYGKRYRWDLYGRRVDPTPSVVILHETTDSYQSALYAFKDYHRKDEDQVSYHTLITL-- 183 Query: 79 PRYNGKPRIWQLVPEQELAWHAGISAWRGA---------TRLNDTSIGIELENRGWQKSA 129 +I +V A+ AG SA+ G +N+ ++ + LE ++ Sbjct: 184 -----DGQIIDVVDPLNRAYGAGNSAFLGEWVVTNPRFKGSVNNFALHLSLETPWDGRN- 237 Query: 130 GVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIA-PQRKDDPGPLFPWQQLAQ 188 G + + Q +L + D + R++I PEN+ H + + DP F W L + Sbjct: 238 GYLNHSGYSDKQYDSLALVLADWMDRFNIPPENITTHQHVDLAGERSDP-RSFDWSNLQR 296 Query: 189 QGIGAWP 195 + Sbjct: 297 RLAAIGY 303 >UniRef50_Q31KQ2 N-acetylmuramoyl-L-alanine amidase, family 2 n=2 Tax=Synechococcus elongatus RepID=Q31KQ2_SYNE7 Length = 317 Score = 111 bits (278), Expect = 2e-23, Method: Composition-based stats. Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 27/172 (15%) Query: 35 RQAQAAYPRIKVLVIHYTADDFDSSLATLTDK------QVSSHYLVPAVPPRYNGKPRIW 88 R Q RI ++V+H T DS++ Q S H L+ I Sbjct: 129 RNGQPVDNRISLIVLHETVASADSAINFFQTPHPRDEDQASYHALIR-------RNGTIV 181 Query: 89 QLVPEQELAWHAGISAWRGA---------TRLNDTSIGIELENRGWQKSAGVKYFAPFEP 139 VP ++ A+ AG S++RG +N+ S+ + LE+ + ++ + Sbjct: 182 YTVPPEKRAFGAGSSSFRGEAVRFNPKLPGSVNNFSLHVSLESPADGRDNRRRHSG-YTA 240 Query: 140 AQIQALIPLAKDIIARYHIKPENVVAHA--DIAPQRKDDPGPLFPWQQLAQQ 189 Q +L LA+ + Y I + + HA D + R DP F W +LAQ+ Sbjct: 241 RQYDSLALLAQQWMTTYTIPGDRITTHAAVDRSGSR-MDP-RSFQWARLAQR 290 >UniRef50_A5Z412 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z412_9FIRM Length = 343 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 31/165 (18%) Query: 41 YPRIKVLVIHYTADDFDSSLATLT-----DKQVSSHYLVPAVPPRYNGKPRIWQLVPEQE 95 + +V+HYT + D++ A + S+H+ V I+Q V ++ Sbjct: 35 SRSVAYVVMHYTGNSKDTAKANANYFGGAGRNASAHFFVD--------DAEIYQSVELRD 86 Query: 96 LAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIAR 155 AWH G +++ + N SIGIE+ + L + Sbjct: 87 TAWHCGAKSYKHGSCRNANSIGIEMCCTAGNYRI--------SDRTKENAAYLCAFLCKM 138 Query: 156 YHIKP----ENVVAHADIAPQRKDDPGPLF----PWQQLAQQGIG 192 I V+ H D+ K+ P + WQ+ + G Sbjct: 139 LGIGAGGVDSYVLRHYDVTG--KNCPAQMVSNPTEWQEFKNKVKG 181 >UniRef50_B9XDJ6 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=bacterium Ellin514 RepID=B9XDJ6_9BACT Length = 337 Score = 111 bits (277), Expect = 3e-23, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 66/262 (25%), Gaps = 49/262 (18%) Query: 7 LVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK 66 +VA + + Y K +V H + S+++ Sbjct: 14 IVAGTTAANASSDYAPAIWNPAYSGHWYTSGNGH----KFVVCHDMEGYYLSTISYFQQS 69 Query: 67 --QVSSHYLVPAVPPRYN--GKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELEN 122 Q S HY V + Q+V E AWH N G E E Sbjct: 70 GTQASIHYCVNGKQDTGTDAPAGELTQMVSEAYYAWHV--------LCWNTYCAGTEHEG 121 Query: 123 RGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPE--NVVAHADI----------- 169 A + A L + + Y I + ++V H + Sbjct: 122 FASNP-------AWYTDAMYNTSGLLQRHLCDHYGIPKDRNHIVGHDEWQNAAWCTYASA 174 Query: 170 ------APQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLA 223 DPG + W +L P + A T + A+ Sbjct: 175 HFGIDTTCNSHTDPGQYWDWNKLMSIVN---PTTTTIVVDNADAGFSTSANWATGTSATD 231 Query: 224 RYG----YDVKPDMTPREQRRV 241 +YG Y ++ Sbjct: 232 KYGADYRYRSNASLSDAATFST 253 >UniRef50_C7N6M2 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N6M2_SLAHD Length = 268 Score = 110 bits (276), Expect = 4e-23, Method: Composition-based stats. Identities = 46/233 (19%), Positives = 78/233 (33%), Gaps = 48/233 (20%) Query: 28 GYQLDTRRQAQAAYPR----IKVLVIHYTADDFDSSLATLTD--------KQVSSHYLVP 75 Y+++ + PR +K +V+HYT ++ A L + +Q S+HY + Sbjct: 2 SYEINKHHGSYNIQPRSASAVKYIVVHYTGSGTSAAPAALNNCQYFSGGDRQASAHYFID 61 Query: 76 AVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFA 135 P + L WH G + N SIGIE+ G Sbjct: 62 DETIYEYAD-------PSRHLTWHVGDGRGKYGI-TNTNSIGIEVCQDGD---------R 104 Query: 136 PFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFP--------WQQLA 187 PF A+ + L L + ++ Y + + VV H D RK P P W+ L Sbjct: 105 PFTEAETKRLQWLVRRLMDEYGVPADRVVRHYD--ASRKLCPYYYTPGGSGGDAAWKALH 162 Query: 188 QQGI------GAWPDAQRVNFYLAGRAPHTPVDTASL---LELLARYGYDVKP 231 ++ W + + +Y + + GY + Sbjct: 163 RRITADGASKAGWVKSAKGWWYRRADGTWPASKWERIGGDWYCFDKDGYAMAD 215 >UniRef50_B2A1Q6 N-acetylmuramoyl-L-alanine amidase family 2 n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A1Q6_NATTJ Length = 235 Score = 110 bits (275), Expect = 5e-23, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 70/225 (31%), Gaps = 38/225 (16%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLATLT-------DKQVSSHYLVPAVPPRYNGKP 85 + I LVIH T + + A ++ S+HY V Sbjct: 9 DYNYSSRQNQTISYLVIHDTGNSRPGADAKAHYHYFNAGNRSASAHYFVD--------DT 60 Query: 86 RIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQAL 145 +I QLV + +WH G R N SIGIE+ A ++ Sbjct: 61 QILQLVEDHHASWHCGDGRGRYGI-TNSNSIGIEICINSDGNYAKA----------VEQT 109 Query: 146 IPLAKDIIARYHIKPENVVAHADIAPQRKDDPG-----PLFPWQQLAQQGIGA-----WP 195 I L + +Y I +V H D++ RK PG W +L + Sbjct: 110 IKLTAYLAEKYTIPHNKIVRHYDVS--RKICPGTMSRDNWALWYELKDDVLALRKQNSHS 167 Query: 196 DAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRR 240 + + +++L G P+ + R+ Sbjct: 168 EDASGKLNSQSEVEPETNNLKRSIQILTEAGIINSPEYWDQHARK 212 >UniRef50_A9B3J4 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B3J4_HERA2 Length = 426 Score = 110 bits (275), Expect = 5e-23, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 76/229 (33%), Gaps = 36/229 (15%) Query: 25 EKEGYQLDTRRQAQAAYP-RIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNG 83 + + A+ + + +++H TA + + S +YL+ Sbjct: 4 DTSYLNKTPNKTARNTTSFKPEFVILHETAGYGSLEWNLRPEVRSSYNYLI-------AR 56 Query: 84 KPRIWQLVPE-QELAWHAGISAWRGATR---LNDTSIGIELENRGWQKSAGVKYFAPFEP 139 + + V E +AWHAG+ +W +N +IG+E+E P Sbjct: 57 DGKTYHYVNEKSYIAWHAGVRSWARGYSGGEINVYAIGVEVEGPNDG--------TPITT 108 Query: 140 AQIQALIPLAKDIIARY--HIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDA 197 AQ +AL+ L + Y I + AH+ +AP KDDP + Sbjct: 109 AQTKALVELIRYFRDTYAIPINRDYFFAHSTVAPGYKDDPR--------------GYSVE 154 Query: 198 QRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQ 246 + P T +L L Y + + AF+ Sbjct: 155 YTLKLLDESSLPSTGPRPNTLGAQLRNEVYKLAKGEYRPDWMFHQYAFK 203 >UniRef50_C0CQ24 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=C0CQ24_9FIRM Length = 279 Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 65/176 (36%), Gaps = 38/176 (21%) Query: 30 QLDTRRQAQAAYPRIKVLVIHYTADDFDSS---------LATLTDKQVSSHYLVPAVPPR 80 ++ + +K + IHYTA+ ++ L +VSSH++V Sbjct: 119 TVNPYSRPGTPLEEVKYVAIHYTANPGSTAKNNRDYFEGLKDNHSNEVSSHFVVGL---- 174 Query: 81 YNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPA 140 + I Q +P E+++ N ++ IE + + F A Sbjct: 175 ---EGEIVQCIPTNEISYA--------TNSRNVDTLSIECCH--------LDETGKFNEA 215 Query: 141 QIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFP----WQQLAQQGIG 192 Q+L+ L + R+ + ++V+ H D+ K+ P W+QL + Sbjct: 216 TYQSLVELTAYLCNRFGLDIDHVIRHYDVTG--KNCPKYYVEHPEAWEQLKKDISA 269 >UniRef50_B0G3S2 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=B0G3S2_9FIRM Length = 254 Score = 110 bits (274), Expect = 8e-23, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 69/184 (37%), Gaps = 40/184 (21%) Query: 24 VEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATL---------TDKQVSSHYLV 74 ++ E + ++Q +I +VIHYTA+ +++ + + SS+++V Sbjct: 89 IDVELLTPNPYSRSQEKTDKITGIVIHYTANPGATAIGNRNYFEGLKDSHETKASSNFVV 148 Query: 75 PAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYF 134 I Q +P E+A+ + N ++ IE + Sbjct: 149 GL-------NGEIVQCIPTWEVAYA--------SNDRNYDTVSIECCHPDATGK------ 187 Query: 135 APFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLF-----PWQQLAQQ 189 F A ++++ L + ++++ E+V+ H D+ K P F W Q + Sbjct: 188 --FNDATYRSMVQLTAWLCLKFNLTEEDVIRHYDVTG--KICP-KYFVENEGAWDQFRKD 242 Query: 190 GIGA 193 A Sbjct: 243 VKSA 246 >UniRef50_UPI0001BC309D N-acetylmuramoyl-L-alanine amidase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC309D Length = 221 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 61/167 (36%), Gaps = 35/167 (20%) Query: 21 KGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSS---------LATLTDKQVSSH 71 +++E ++ + ++ +V+HY + ++ LA L + SSH Sbjct: 59 SDNIQQEILPVNPYSRPGDKVSKVTAIVVHYVGNPGTTAEQNRSYFNNLAELKNAYASSH 118 Query: 72 YLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGV 131 Y+V I Q VP E+A+ + N +I IE ++ + Sbjct: 119 YVVGLQ-------GEIIQCVPLDEIAYA--------SNNRNYDTISIECCHQDAEGR--- 160 Query: 132 KYFAPFEPAQIQALIPLAKDIIARYHIKP-ENVVAHADIAPQRKDDP 177 F +L+ L + Y + P +V+ H D+ K P Sbjct: 161 -----FTDDTYNSLVRLVAALCRTYGLNPETDVIRHYDVTG--KLCP 200 >UniRef50_C0WEF9 Putative uncharacterized protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WEF9_9FIRM Length = 221 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 47/228 (20%), Positives = 73/228 (32%), Gaps = 55/228 (24%) Query: 2 RRFFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAA-------------------YP 42 R A LL + C + E + + AQ+ Sbjct: 4 RLLILFSCALLLPSACGFSAPGKKAERPAIIQKYVAQSPKRNTLMKAYSKLHYGREMTDI 63 Query: 43 RIKVLVIHYTADDFDSSLATL----TDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAW 98 + + +V+H+TA+D + ++S L IWQL+PE LA Sbjct: 64 KPRAVVVHWTANDSQEGTYQFFYAEENPRLSYGTLNVGAQFLVGRDGAIWQLMPETALAR 123 Query: 99 HAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHI 158 HA LN +IGIE G + AQ++A I L + +Y Sbjct: 124 HA--------IGLNWCAIGIENVG-------GARGKEDLTEAQLRANIALISYLKDKYP- 167 Query: 159 KPENVVAHADIAPQR---------------KDDPGPLFPWQQLAQQGI 191 V+ H + + K DPGP F + L + Sbjct: 168 TLTTVLGHYEQDKAKQTDLWREDVPNYYHGKIDPGPTF-MKGLREALT 214 >UniRef50_C7Q860 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q860_CATAD Length = 589 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 38/192 (19%), Positives = 69/192 (35%), Gaps = 33/192 (17%) Query: 6 WLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTD 65 + A ++ + Y+ R + A Y + IH +L T D Sbjct: 211 YPSAIDCVVPTSYDCNVVSGPCTYESSNRPTSYAVYD----VTIHDIEGTAQDALTTFQD 266 Query: 66 --KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENR 123 K VS HY++ ++Q+V E+++A+HAG + N+ ++GIE Sbjct: 267 ISKGVSVHYVID-------SDGTVYQVVREKDIAYHAGNFYY------NEHAVGIEHAGI 313 Query: 124 GWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPE--NVVAHADI-APQ-----RKD 175 + + + A L + +Y+I + ++ AH AP Sbjct: 314 DATG------YQWYNATEYLASAKLVAYLANKYNIPLDHAHITAHGTTPAPTTASSPNHV 367 Query: 176 DPGPLFPWQQLA 187 DPG + W Sbjct: 368 DPGKYWLWDYYF 379 >UniRef50_B1ABI9 Putative uncharacterized protein n=1 Tax=Lactococcus phage asccphi28 RepID=B1ABI9_9CAUD Length = 330 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 37/228 (16%), Positives = 69/228 (30%), Gaps = 23/228 (10%) Query: 18 AGEKGIVEKEGYQLDTRRQAQAAYPR-IKVLVIHYTADDFDSSL-ATLTDKQVSSHYLVP 75 + + Y+ + + I ++V+H+ + + +++ S+HY + Sbjct: 1 MTISSLTNIKKYEWQSSGHFGGITRKPIDMIVLHHNGGTGSNVVPNCWIEREASAHYQIE 60 Query: 76 AVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFA 135 +I + E AWH G N +IGIE +N V Sbjct: 61 --------NGQIINCLDEDITAWHCGA----YGVDNNSHTIGIEHQNSTGAPDWLVSN-- 106 Query: 136 PFEPAQIQALIPLAKDIIARYHIKPE--NVVAHADIAPQRKDDPGPL-FPWQQLAQQGIG 192 Q + L DI RY I + ++V H ++ D G L W + I Sbjct: 107 ---ENQ-EKSAQLVADIAKRYGIPLDRNHIVRHREMPNCNTDCSGGLDIDWVVTRAKQIA 162 Query: 193 AWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRR 240 + ++ L + G +T Sbjct: 163 GQGGIPAPTPTPTPSNSNPVNPVVTVSYGLRQIGAGWLGTITDFNNSN 210 >UniRef50_C4ZEY9 N-acetylmuramoyl-L-alanine amidase n=3 Tax=Clostridiales RepID=C4ZEY9_EUBR3 Length = 248 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 72/193 (37%), Gaps = 41/193 (21%) Query: 30 QLDTRRQAQAAYPRIKVLVIHYTADDFDSS---------LATLTDKQVSSHYLVPAVPPR 80 + + Q A ++ +V+HYTA+ S+ LA + SSH+++ Sbjct: 83 TPNPYSRPQKALEKVNGIVVHYTANPGTSARQNRDYFNGLAETKKTKASSHFVIGL---- 138 Query: 81 YNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPA 140 + I Q +P E+++ + N +I IE F + Sbjct: 139 ---EGEIVQCIPCNEISYA--------SNNRNSDTISIECC--------IEDETGKFNDS 179 Query: 141 QIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLF-----PWQQLAQQGIGAWP 195 Q+LI L ++ RY + ++V+ H D+ K P F W+Q + + + Sbjct: 180 TYQSLIELTTWLMGRYDLSADDVIRHYDVTG--KKCP-LYFVEHEDAWEQFHKD-LDTYI 235 Query: 196 DAQRVNFYLAGRA 208 + V A + Sbjct: 236 EENGVPKEEASQN 248 >UniRef50_A3DIC1 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium thermocellum ATCC 27405 RepID=A3DIC1_CLOTH Length = 218 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 62/209 (29%), Gaps = 40/209 (19%) Query: 29 YQLDTRRQAQAAYPRIKVLVIHYTADDFDSSL---ATLTDKQ----VSSHYLVPAVPPRY 81 + + + + IH T + ++ A LT+ S H +V Sbjct: 10 PKTTPYNRRPGYSMTPEYITIHSTGNPTSTARNERAWLTNPNNNVTASWHIVVD------ 63 Query: 82 NGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQ 141 + + +P E+AWHAG G N SIGIE+ G + Sbjct: 64 --EKEAIEAIPLNEVAWHAGDG---GNGTGNRKSIGIEICESGDR------------QKT 106 Query: 142 IQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDP------GPLFPWQQLAQQGIGAWP 195 +Q L ++ + + H D + K P G W+Q + Sbjct: 107 LQNAAELVAKLLKERGWGVDKLRRHYDWSG--KICPRIFHDNGKWTGWKQFKEAVQKELF 164 Query: 196 --DAQRVNFYLAGRAPHTPVDTASLLELL 222 D + + A LL Sbjct: 165 GGDNMTQDKNQPSDWAKEAWEWAKQQGLL 193 >UniRef50_B6BGC2 B-N-acetylglucosaminidase, glycoside hydrolase family 3 protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGC2_9PROT Length = 555 Score = 107 bits (266), Expect = 5e-22, Method: Composition-based stats. Identities = 45/204 (22%), Positives = 69/204 (33%), Gaps = 54/204 (26%) Query: 18 AGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTA-DDFDSSLATLTDK---------- 66 E+ + K + Q + K +V+H+TA DF+ L Sbjct: 367 GQERIDMSKAYIEQHYGFDVQNINIKPKAIVLHWTAVMDFEDCFKRLKGNTLYSDRGDIA 426 Query: 67 -----QVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELE 121 VSSH+LV I+QL+P+ +A H LN +SIGIE Sbjct: 427 DAGALNVSSHFLV-------ARDGTIYQLMPDNWMARHV--------IGLNYSSIGIENV 471 Query: 122 NRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIA----------- 170 P Q+ A I L K + A+Y E ++ H + Sbjct: 472 GGEDNVK------DDLTPEQVDANIKLVKYLKAKYP-NIEYLIGHHEYTQMEKTPLWLEK 524 Query: 171 ----PQRKDDPGPLFPWQQLAQQG 190 +K DPG F ++ + Sbjct: 525 DAEYRTKKADPGEKF-MNRVRKHV 547 >UniRef50_Q3AXW0 N-acetylmuramoyl-L-alanine amidase, family 2 n=13 Tax=Chroococcales RepID=Q3AXW0_SYNS9 Length = 308 Score = 107 bits (266), Expect = 7e-22, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 63/175 (36%), Gaps = 25/175 (14%) Query: 28 GYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK------QVSSHYLVPAVPPRY 81 G + + +V+V+H T S++ T QVS H L+ Sbjct: 130 GKRFTEDAFGRRLDGSPRVIVLHETVYSVSSAVNTFQTPHPIDEDQVSYHTLIS------ 183 Query: 82 NGKPRIWQLVPEQELAWHAGISAWRGA---------TRLNDTSIGIELENRGWQKSAGVK 132 R+ LV A+ AG SA+ G +N+ ++ + LE + G Sbjct: 184 -RDGRVLDLVDPLMRAYGAGYSAFLGEWAITNKRLKGSVNNFALHLSLETP-SNGANGRS 241 Query: 133 YFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIA-PQRKDDPGPLFPWQQL 186 + + Q AL + + +++ P +V H + + DP F W L Sbjct: 242 GHSGYSSEQYDALALVLAGWMDAFNLPPTSVTTHRHVDIGGERADP-RSFDWSAL 295 >UniRef50_C3EV93 N-acetylmuramoyl-L-alanine amidase n=11 Tax=Bacillus thuringiensis RepID=C3EV93_BACTK Length = 318 Score = 106 bits (265), Expect = 7e-22, Method: Composition-based stats. Identities = 39/158 (24%), Positives = 55/158 (34%), Gaps = 33/158 (20%) Query: 34 RRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK---------QVSSHYLVPAVPPRYNGK 84 R A + + IH TA+ + A + VS H+ V Sbjct: 23 NRNRPAYSMNPRYITIHTTANQNAGTDARAHARYVNNGGGSSSVSWHFTVD--------D 74 Query: 85 PRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQA 144 RI Q +P E WHAG G N +SIGIE+ Sbjct: 75 NRIVQHLPLNENGWHAGDGNGAG----NRSSIGIEICENRDGNFEKALTH---------- 120 Query: 145 LIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFP 182 L K ++A +K NVV+H + K+ P P+F Sbjct: 121 AAGLVKFLMAHLGLKIGNVVSHQHWSG--KNCPRPIFN 156 >UniRef50_B5CSL4 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=B5CSL4_9FIRM Length = 258 Score = 106 bits (264), Expect = 9e-22, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 66/180 (36%), Gaps = 40/180 (22%) Query: 22 GIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSS---------LATLTDKQVSSHY 72 +++ + ++ + I +VIHYTA+ ++ L + + SS++ Sbjct: 96 PVIDVQLLDVNPYSRPGTTIDEIHGIVIHYTANPGSTAQENRDYFNGLKDSHETEASSNF 155 Query: 73 LVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVK 132 +V + I Q VP E+A+ + N ++ IE + Sbjct: 156 VVGL-------EGEIIQCVPTWEMAYA--------SNERNADTVSIECCHP--------D 192 Query: 133 YFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLF-----PWQQLA 187 F Q+++ L + +Y++ + V+ H D+ K P F W+Q Sbjct: 193 ETGKFTKETYQSMVQLTAWLCKKYNLNEDQVIRHYDVTG--KICP-KYFVEDEAAWKQFK 249 >UniRef50_UPI0001B554B9 secreted amidase n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B554B9 Length = 639 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 72/213 (33%), Gaps = 35/213 (16%) Query: 16 GCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQV--SSHYL 73 CA + ++ G D A I +V+H F S+ +L+ +HYL Sbjct: 245 SCAFDPVLIAANGQVSDR----PANGIAIDRIVLHTAEGSFASAKQSLSAPGAVSGAHYL 300 Query: 74 VPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKY 133 + QL+ ++LA+ G + N S+ IE + Sbjct: 301 -------MDTDGTTTQLMANKDLAFAVGNYHY------NLHSVSIEQAGF------TARG 341 Query: 134 FAPFEPAQIQALIPLAKDIIARYHIKPE--NVVAHADIAPQ-------RKDDPGPLFPWQ 184 + A Q L K + RY + + +V+ H ++ + D G + W Sbjct: 342 ADWYTDAVYQRTAELVKYLAERYDVPLDRQHVLGHDNVPGSLDSNLAAQHWDKGTAWDWN 401 Query: 185 QLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTAS 217 + + +GA DA AG + + Sbjct: 402 RFMR-LLGAPTDAGTRGVGKAGSVVTIAPEFGT 433 >UniRef50_B0MAX7 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MAX7_9FIRM Length = 246 Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats. Identities = 42/228 (18%), Positives = 74/228 (32%), Gaps = 45/228 (19%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLATLT-----DKQVSSHYLVPAVPPRYNGKPRI 87 + + + I +V+HYT + D++L K S+HY V + Sbjct: 13 SNYGGKRSTKDIDYIVVHYTGNSKDTALNNCKYFQGASKGASAHYFVDGGKY-------V 65 Query: 88 WQLVPEQELAWHAGI--SAWRGATRL-----NDTSIGIELENRGWQKSAGVKYFAPFEPA 140 ++ V +AW G S A N S+ +E+ N + A V+ Sbjct: 66 YKSVAVNRVAWAVGGCYSTVGAAGNYYKKCTNANSLSVEMCNVTRKVPANVR-------- 117 Query: 141 QIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLF-----PWQQLAQQGIGAWP 195 I L K ++ +Y + +V+ H D+ K+ P P W+ G Sbjct: 118 --DQTIELVKFLMQKYGVPASHVIRHWDVNG--KNCPMPWIGADNNGWKTFKNAIGGQSV 173 Query: 196 DAQRVNFYLAGRAPHTPVDTASLLELLA--RYGYDVKPDM-TPREQRR 240 V + A + L G D+ D ++ Sbjct: 174 KYTTVKKTSSKNA------IRWMQGKLNSLASGADIAVDGEWGPATQK 215 >UniRef50_C5RQQ9 N-acetylmuramoyl-L-alanine amidase family 2 n=3 Tax=Clostridium cellulovorans 743B RepID=C5RQQ9_CLOCL Length = 304 Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 68/197 (34%), Gaps = 32/197 (16%) Query: 39 AAYPRIKVLVIHYTADDFDSSLATL-----TDKQVSSHYLVPAVPPRYNGKPRIWQLVPE 93 + IK +V H+T +D D++ D++ S+HY V I Q+V E Sbjct: 14 SEGNNIKFIVCHFTGNDNDTAKNNADYFGSCDREASAHYFVDNN--------EIRQVVEE 65 Query: 94 QELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDII 153 +WH G N SI IE+ + L + ++ Sbjct: 66 YNASWHCGDGN-GAYGITNYNSISIEMCGANGDI----------SETTAKNARNLIRLLM 114 Query: 154 ARYHIKPENVVAHADIAPQRKDDPGP-----LFPWQQLAQQGIGAWPDAQRVNFYLAGRA 208 +Y ++ ENVV H D RK+ P P W + + + + + + R Sbjct: 115 KKYGVQIENVVRHYD--ASRKNCPSPFSSNNWARWTEFKNKIVNE-VEEDEMKIRIFSRT 171 Query: 209 PHTPVDTASLLELLARY 225 + L L Y Sbjct: 172 WYLAQYPDVLKSGLDPY 188 >UniRef50_C0F005 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0F005_9FIRM Length = 254 Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 58/172 (33%), Gaps = 38/172 (22%) Query: 32 DTRRQAQAAYPRIKVLVIHY------TADDFDSSLATLTDKQ---VSSHYLVPAVPPRYN 82 + ++ A ++K +VIHY TA + L + SSHY+V Sbjct: 101 NPYSRSGIALRKVKGVVIHYVENPGSTAKENRDYFNNLQNTHLTKASSHYIVGL------ 154 Query: 83 GKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQI 142 + Q +P+ E+++ + N +I IE + F Sbjct: 155 -DGEVIQCIPQSEISYA--------SNNRNKDTISIECCHPKKNGK--------FNDKTY 197 Query: 143 QALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFP----WQQLAQQG 190 + + L I Y + +NV+ H D+ K P W+ + Sbjct: 198 NSAVRLTAWICKTYGLSSKNVIRHYDVTG--KMCPRYYVKHEQAWKDFCNKV 247 >UniRef50_B1V3W0 N-acetylmuramoyl-L-alanine amidase, family 2 n=8 Tax=Clostridium perfringens RepID=B1V3W0_CLOPE Length = 553 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 66/205 (32%), Gaps = 35/205 (17%) Query: 35 RQAQAAYPRIKVLVIHYTADDFDSS--------LATLTDKQVSSHYLVPAVPPRYNGKPR 86 +Q K +VIH T + + A + + S+HY++ + Sbjct: 81 NYSQGITINPKYIVIHDTDNRQAGANAMANRNYFANHPNAKASAHYIID--------EGN 132 Query: 87 IWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALI 146 I Q + + WH G N T+I IEL ++ I Sbjct: 133 IIQALEDTWKGWHVGDGNNPNIN--NSTTIAIELCVNKGNDF----------DKTLENGI 180 Query: 147 PLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFP-----WQQLAQQGIGAWPDAQRVN 201 L K ++ +Y I ENVV H D + K + W ++ G + Sbjct: 181 ELTKYLMNKYDIPAENVVMHRDASG--KTCSRMMIEDRPSLWPYFKERISGGDGSLEDDG 238 Query: 202 FYLAGRAPHTPVDTASLLELLARYG 226 + T ++ E L+ G Sbjct: 239 LKPKMQGKVTNASVLNVRESLSTSG 263 >UniRef50_B8HV25 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HV25_CYAP4 Length = 274 Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 69/197 (35%), Gaps = 37/197 (18%) Query: 19 GEKGIVEKEGY--QLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK------QVSS 70 E V+ Y +L R+ ++V+H T +++A Q S Sbjct: 89 QENAWVDPSNYGERLTQDAFGHPISSRVTLVVLHETVISGRAAIAAFQTNRPDDLAQASY 148 Query: 71 HYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATR-------------LNDTSIG 117 H L+ + LVP ++ A+ AG S + GA +N+ S Sbjct: 149 HDLIL-------RNGTVVHLVPLEKRAFGAGNSVFYGANGPETVQTNPKLPSSVNNFSYH 201 Query: 118 IELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHA--DIAPQRKD 175 I LE+ + + + A+ Q+L L K I + H D RK Sbjct: 202 ISLESPADGNNENATHSG-YTAAEYQSLAWLIKAA----GIPSNRITTHYAVDRTGTRK- 255 Query: 176 DPGPLFPWQQLAQQGIG 192 DP F + +L + + Sbjct: 256 DP-RSFDYTKLFELLVA 271 >UniRef50_A6CD01 Probable N-acetylmuramoyl-L-alanine amidase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CD01_9PLAN Length = 221 Score = 104 bits (260), Expect = 3e-21, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 63/186 (33%), Gaps = 30/186 (16%) Query: 19 GEKGIVEKEGYQLDTRRQAQAAY--PRIKVLVIHYTADDFDS--SLATLTDK-------- 66 + E +D + + +VIH+TA S S+ L K Sbjct: 27 TTPPTIAVEPLAIDPPNPWKPEAEVRDWEYIVIHHTASSTGSVESIHELHSKKKDKSGNS 86 Query: 67 --QVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRG 124 + H+++ +G EQ HAG + + N IGI L Sbjct: 87 WLGIGYHFVIGNGNGMPDGAIESTFRWREQMHGAHAGNNKY------NQHGIGICLVGNF 140 Query: 125 WQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQ 184 + P AQ+ A+ L + A Y+I ++V H D+ PG FP Sbjct: 141 ENE--------PPSEAQLAAVKKLVGVLKAEYNINSDHVQGHRDVKAT--ACPGKYFPMS 190 Query: 185 QLAQQG 190 ++A Sbjct: 191 EVASAI 196 >UniRef50_Q9ZX49 Gp29 n=1 Tax=Mycobacterium phage TM4 RepID=Q9ZX49_BPMT4 Length = 547 Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 60/160 (37%), Gaps = 16/160 (10%) Query: 36 QAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSH-YLVPAVPPRYNGKPRIWQLVPEQ 94 + R+ +V H+T D S +++ H L + Sbjct: 212 RGHGDMGRLWGVVCHHTGSDNTPS------SEIAFHPSLGLCSQIHLARNGTVTLC--GV 263 Query: 95 ELAWHAGISAWRG--ATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDI 152 +AWHAG+ ++ G N +IGIE +N G G + + AQ A + I Sbjct: 264 GIAWHAGVGSYPGLPEDNANAVTIGIEAQNSGT--YDGAPHRTNWPDAQYDAYVKCCAAI 321 Query: 153 IARYHIKPENVVAHADIAPQR--KDDPGPLFPWQQLAQQG 190 R ++ ++V++H + A ++ K DPG Sbjct: 322 CRRLGVRADHVISHKEWAGRKQGKWDPG-AIDMNIFRADV 360 >UniRef50_UPI00019739B2 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium sp. M62/1 RepID=UPI00019739B2 Length = 248 Score = 103 bits (258), Expect = 5e-21, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 60/192 (31%), Gaps = 43/192 (22%) Query: 16 GCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLT----------- 64 V +E ++ + + +V+HY + ++ Sbjct: 76 AAIEMPDWVTQELLTVNPYSRPGTKLCSVNGIVVHYVGNPGTTAEQNRNYFEGLKAQTGE 135 Query: 65 -DKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENR 123 VSS++++ I Q VP E+A+ + N +I IE + Sbjct: 136 NKVSVSSNFII-------GMDGEIIQCVPIDEMAYA--------SNSRNSDTISIECCHP 180 Query: 124 GWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLF-- 181 F +L+ L + + +KP++V+ H D+ K P F Sbjct: 181 EADGR--------FTEETYDSLVRLTAWLCSELKLKPKDVIRHYDV--TEKACP-KYFVD 229 Query: 182 ---PWQQLAQQG 190 W+ + Sbjct: 230 HPQEWETFLKDV 241 >UniRef50_C0Z5F5 Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z5F5_BREBN Length = 278 Score = 103 bits (258), Expect = 5e-21, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 64/161 (39%), Gaps = 36/161 (22%) Query: 30 QLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQ-------VSSHYLVPAVPPRYN 82 +++R + + K +VIH+TA++ + AT S+HY+V Sbjct: 10 NVNSRPKKKIV---PKGVVIHWTANERSGANATANRNYFNKPTTVASAHYIVD------- 59 Query: 83 GKPRIWQLVPEQELAWHAGISAW------RGATRLNDTSIGIELENRGWQKSAGVKYFAP 136 +I + +PE E+ +H G + + + N+ +IGIE+ Sbjct: 60 -DKQIIRCLPEDEMGYHVGAQTYSQAALNKLSNYPNNCTIGIEMCVNADGSF-------- 110 Query: 137 FEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDP 177 + + L DI+ R+ E++ H DI K+ P Sbjct: 111 --AKMYEQTVALTADILKRHGWGVEHLWRHYDITG--KNCP 147 >UniRef50_P81717 N-acetylmuramoyl-L-alanine amidase A n=1 Tax=Achromobacter lyticus RepID=CWHA_ACHLY Length = 177 Score = 103 bits (258), Expect = 5e-21, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 61/186 (32%), Gaps = 42/186 (22%) Query: 29 YQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK--QVSSHYLVPAVPPRYNGKPR 86 + + A + +++H + S++ + QVS+HYL+ + Sbjct: 9 WNPASSSNYSTASNQTSAVIMHTMEGSYAGSISWFQNPSAQVSAHYLIRKS------DGQ 62 Query: 87 IWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALI 146 I Q+V E AWHA N +IGIE + R + A + A Sbjct: 63 ITQMVREYHQAWHA--------KNHNYYTIGIEHDGRAADAGN-------WSAAMVNASA 107 Query: 147 PLAKDIIARYHIK------------------PENVVAHADIAPQ-RKDDPGPLFPWQQLA 187 L K I AR + V H ++ + DPG FPW Sbjct: 108 RLTKSICARRGVNCASAWKGPGYDTFHLVPDSVRVKGHGMLSGNENRYDPGKYFPWSNYY 167 Query: 188 QQGIGA 193 G Sbjct: 168 NLINGG 173 >UniRef50_P14892 N-acetylmuramoyl-L-alanine amidase cwlA n=7 Tax=root RepID=CWLA_BACSP Length = 251 Score = 103 bits (257), Expect = 6e-21, Method: Composition-based stats. Identities = 43/266 (16%), Positives = 75/266 (28%), Gaps = 50/266 (18%) Query: 30 QLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTD-----KQVSSHYLVPAVPPRYNGK 84 + + H T +D ++ + S H V Sbjct: 9 PVSRYSVLCPYEMNPTEITFHNTYND-APAINERNNVANNSTGTSFHIAVD--------D 59 Query: 85 PRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQA 144 QL+P AWHAG R N SIG+E+ + + A++ A Sbjct: 60 KEAIQLIPFNRNAWHAGDGTNG---RGNRHSIGVEICYSQSGGAR-------YRKAELNA 109 Query: 145 LIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQ---LAQQGIGA-------- 193 + + ++ ++ I V H + K P + + Q Sbjct: 110 -VEVIAQLMIQFDIPISKVKTHQERNG--KYCPHRMLDEGRVQWFKNQCANRASSIKNSN 166 Query: 194 ------WPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQM 247 + F +L ++ GY+ + +Q V F+ Sbjct: 167 KTQETGKVEIIVNKFNKVVTYEFGTALVPEMLGMMDALGYESRIISYGDKQGLV--RFET 224 Query: 248 HFRPTLYNGEADAETQAIAEALLEKY 273 +R E D T A +A KY Sbjct: 225 AYRQGN---ELDKAT-AWLDAKGLKY 246 >UniRef50_C7UBT6 Sporulation domain-containing protein n=3 Tax=Bacilli RepID=C7UBT6_ENTFA Length = 306 Score = 103 bits (257), Expect = 6e-21, Method: Composition-based stats. Identities = 41/170 (24%), Positives = 63/170 (37%), Gaps = 26/170 (15%) Query: 18 AGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTAD-DFDSSLATLTDKQVSSHYLVPA 76 G + K G+Q + + ++ +VIH+ A ++D + ++ S+HY + Sbjct: 1 MGISSLATKYGFQSFPHYSSGRSGAKVNKIVIHHMAGTNYDIVPSIWQTREASAHYGIGK 60 Query: 77 VPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAP 136 I V E AWHAG N +SIGIE N S V Sbjct: 61 -------NGEIRAYVDENNTAWHAGN------WNANISSIGIENCNSNGSPSWSV----- 102 Query: 137 FEPAQIQALIPLAKDIIARYHIKP----ENVVAHADIAPQRKDDPGPLFP 182 A I A L DI R+ + +N+ H+ + PG L Sbjct: 103 -NQATIDACAKLVADIAKRHGLGKLVVNQNLFPHSYFSST--SCPGVLLD 149 >UniRef50_B7HAI4 N-acetylmuramoyl-L-alanine amidase n=19 Tax=Bacillus cereus group RepID=B7HAI4_BACC4 Length = 533 Score = 103 bits (257), Expect = 6e-21, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 57/226 (25%), Gaps = 54/226 (23%) Query: 29 YQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLT------------DKQVSSHYLVPA 76 + + Q K + IH T + + A D+ S H+ V Sbjct: 128 PAGNDNIRPQNY-MSPKYITIHETDNTSVGAGARNHAQYLYNQAVGNIDRAASWHFTVD- 185 Query: 77 VPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAP 136 I+Q +P E WHAG G N SI IE+ Sbjct: 186 -------DKEIYQHLPLNENGWHAGDGDGPG----NRESIAIEIAVNSDGN--------- 225 Query: 137 FEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFP---WQQL------- 186 + A + L ++ + N+V H + K P + W Sbjct: 226 YSKA-VDNAKKLVAYLMKETGVPLNNIVKHQKWSG--KICPANMINNGQWDAFVNGVGGY 282 Query: 187 -------AQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARY 225 G W + G + + R Sbjct: 283 YNNLYQPKDDITGGWYEEAIRELNRRGIMIGEGNGVFAPNRAITRA 328 >UniRef50_Q04T28 Amidase n=4 Tax=Leptospira RepID=Q04T28_LEPBJ Length = 188 Score = 103 bits (257), Expect = 7e-21, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 62/189 (32%), Gaps = 38/189 (20%) Query: 23 IVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLT---------DKQVSSHYL 73 ++++ + + +K +V+H+TA ++ + S+H+ Sbjct: 7 HIKQDFLTPNPHSRPGDKIKEVKGIVLHWTALPNATAQNIRDYFESLKAPEGRFASAHFA 66 Query: 74 VPAVPPRYNGKPRIWQLVPEQELAWHAGISAWR-------GATRLNDTSIGIELENRGWQ 126 V V I Q +P E+A+H G + G N +IGIE Sbjct: 67 VGLV-------GEIVQCIPLDEIAYHCGSRTYTSEKEKRLGPDSPNFYTIGIEQC----- 114 Query: 127 KSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDP-----GPLF 181 F + + L + +Y++ ++ H I KD P P Sbjct: 115 ---VQDMTGKFTEKTLDSAARLTAQLCLKYNLDVNDLWTHQGI-VGWKDCPRWYNTHPK- 169 Query: 182 PWQQLAQQG 190 W ++ Sbjct: 170 DWIGFKKRV 178 >UniRef50_C7GYS0 Putative N-acetylmuramoyl-L-alanine amidase CwlA n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYS0_9FIRM Length = 166 Score = 103 bits (257), Expect = 7e-21, Method: Composition-based stats. Identities = 41/174 (23%), Positives = 64/174 (36%), Gaps = 31/174 (17%) Query: 33 TRRQAQAAYPRIKVLVIHY-----TADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRI 87 T+ + +++ LVIH+ TA + A + + S+HY V A + Sbjct: 9 TKSSSPRYGNKVRYLVIHWVGAVSTAKNNADYFARV-NPLASAHYFVDA--------KEM 59 Query: 88 WQLVPEQELAWHAGISAWRGATR------LNDTSIGIELENRGWQKSAGVKYFAPFEPAQ 141 W VP + AW G N S+ +EL V PA Sbjct: 60 WASVPTERAAWSVGGGMMSPRGGKFFGKCTNLNSVSVELCCIRKNGKVIVD------PAA 113 Query: 142 IQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFP---WQQLAQQGIG 192 I+ PL + ++ R I V+ H D+ K PG W++L +Q G Sbjct: 114 IKKATPLVRALMKRLKIPAGRVIRHFDVNG--KMCPGGYIDNASWRKLHKQLTG 165 >UniRef50_A7GU51 N-acetylmuramoyl-L-alanine amidase family 2 n=99 Tax=Bacillus cereus group RepID=A7GU51_BACCN Length = 843 Score = 103 bits (256), Expect = 8e-21, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 52/169 (30%), Gaps = 40/169 (23%) Query: 23 IVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLT------------DKQVSS 70 IV K Q+ + + IH TA++ + A + S Sbjct: 223 IVPKGNPQI-----RPGYAMDPRYITIHETANERRGADAKNHAKYLMNQATGSTSRGASW 277 Query: 71 HYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAG 130 H+ V I+Q +P E WHAG N SIGIE+ Sbjct: 278 HFTVD--------DKEIYQHLPLNENGWHAGDGTNGTG---NRQSIGIEIAVNQDGNY-- 324 Query: 131 VKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGP 179 ++ L ++ +I +NV H + K+ P Sbjct: 325 --------EKAVENARKLTAYLMQELNIPIDNVKKHQHWSG--KNCPAK 363 >UniRef50_A0LPT1 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LPT1_SYNFM Length = 288 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 39/159 (24%), Positives = 62/159 (38%), Gaps = 26/159 (16%) Query: 40 AYPRIKVLVIHYTADDFDSS---LATLTDKQ----VSSHYLVPAVPPRYNGKPRIWQLVP 92 + K ++IH+TA D ++ T D+ + H+L+ G +I Sbjct: 137 PNSQWKYIIIHHTATDIGNASLIDRTHEDRGFWYGLGYHFLIDN-GTLGKGDGQI----- 190 Query: 93 EQELAW---HAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLA 149 E W G G +ND IGI L ++ +Q+++L L Sbjct: 191 EASPRWVKQQCGAHCKAG--GMNDKGIGIALVGNFNEEQP--------SSSQLRSLDYLL 240 Query: 150 KDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQ 188 K ++ Y I VV H D+ D PG FPWQ + + Sbjct: 241 KTLMDYYRIPAGRVVGHRDVDGAATDCPGRRFPWQTVRR 279 >UniRef50_C0G0C8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Natrialba magadii ATCC 43099 RepID=C0G0C8_NATMA Length = 321 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 41/176 (23%), Positives = 56/176 (31%), Gaps = 40/176 (22%) Query: 39 AAYPRIKVLVIHYTADDFDSSLATLT--DKQVSSHYLVPAVPPRYNGK-PRIWQLVPEQE 95 A I +VIH TA + +L TLT D VSSHYLV + + QLV Sbjct: 76 ARDHSIDWIVIHVTAGAYQGALNTLTSSDSGVSSHYLVKNYDWTDGPEAGHVDQLVHHDR 135 Query: 96 LAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIAR 155 AWHA + N SIGIE E A ++ L + I Sbjct: 136 AAWHA-------RSIANHRSIGIEHEWFDDNGI---------SDACYESSAELVRCIADM 179 Query: 156 YHIKPE-------------NVVAHADIAPQR--------KDDPGPLFPWQQLAQQG 190 + I E ++ H + + P P + Sbjct: 180 HDIPLEFYTSNTCIQNESGGIIGHTHVPDGDCSSFHHGGRTCPYPDWDMDHFESLV 235 >UniRef50_C3GU84 N-acetylmuramoyl-L-alanine amidase / S-layer protein n=2 Tax=Bacillus thuringiensis RepID=C3GU84_BACTU Length = 747 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 68/224 (30%), Gaps = 44/224 (19%) Query: 38 QAAYP-RIKVLVIHYTADDFDSSLATLTD------------KQVSSHYLVPAVPPRYNGK 84 + P + K + IH TA+ + A + S H+ V Sbjct: 269 RPQNPMKAKYITIHETANTERGANAENHAKYLYNQATQGTFRTASWHFTVD--------D 320 Query: 85 PRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQA 144 I+Q +P E WHAG G N SIGIE+ V + A ++ Sbjct: 321 KEIYQHLPTNENGWHAGD----GQGSGNMESIGIEI---------AVNQDGDYNKA-VEN 366 Query: 145 LIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLF---PWQQLAQQGIGAWPDAQRVN 201 L ++ + I +N+ H + K P + W G ++ Sbjct: 367 AQKLVAHLMKQEGISGDNLRRHQQWSG--KKCPDIMISRGNWNNFVNGAKGFAGQGVGID 424 Query: 202 FYLAGRAPHTPVDT---ASLLELLARYGYDVK-PDMTPREQRRV 241 L + + AS L GY V + V Sbjct: 425 KPLEEKEETVNPNEHNPASPNIKLTVNGYGVNVRSGAGQNYGVV 468 >UniRef50_Q855S8 Gp35 n=10 Tax=root RepID=Q855S8_9CAUD Length = 454 Score = 102 bits (254), Expect = 1e-20, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 63/207 (30%), Gaps = 15/207 (7%) Query: 20 EKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPP 79 + ++ + + I+ +++H+T D +S+ + + + P Sbjct: 212 RPALGDRLKTLPGWQNSGHGDFKDIRGVMVHHTGDSRESAQSIRNGRPDLA---GPLANI 268 Query: 80 RYNGKPRIWQLVPEQELAWHAGISA--WRGATRLNDTSIGIELE--NRGWQKSAGVKYFA 135 + +V + WHAG + W N IGIE G Sbjct: 269 HIAPDGTVT-IVAVG-VCWHAGQGSYPWLPTNNANAHMIGIECAWPTPRPDLPKGYDPAE 326 Query: 136 PFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQR--KDDPGPLFPWQQLA---QQG 190 + AQI ++ + + + V+ H + A K DPG ++ Sbjct: 327 RWPDAQIISMRDTCAALALKLELPATRVIGHKEWAGAAQGKWDPG-NLDMSWFRGEVRKD 385 Query: 191 IGAWPDAQRVNFYLAGRAPHTPVDTAS 217 + + P P D A Sbjct: 386 MEGFVFPGEHPPIEPQPGPTLPPDYAK 412 >UniRef50_A5Z605 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z605_9FIRM Length = 212 Score = 102 bits (254), Expect = 1e-20, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 67/182 (36%), Gaps = 36/182 (19%) Query: 19 GEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSS-----LATLTDKQVSSHYL 73 ++ E ++D ++ +K +V+HY + ++ VSSH++ Sbjct: 49 EMPDWIKSEIIEVDGTSRSGEKLSSVKDIVVHYVGNPGSTAEQNRNFYAGDQSNVSSHFV 108 Query: 74 VPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKY 133 V I Q +P E++ S WR N+ +I IE+ + Sbjct: 109 VGLK-------GEIIQCIPLSEMS---AASNWR-----NNDTISIEVCHPDDTGK----- 148 Query: 134 FAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLF-----PWQQLAQ 188 F ++L+ L + + ++ +V+ H DI K+ P F W++ Q Sbjct: 149 ---FNKKTYKSLVKLVAWLEEQCGLEDGDVIRHYDITG--KECP-RYFVTHEDAWKKFKQ 202 Query: 189 QG 190 Sbjct: 203 DV 204 >UniRef50_D2QH68 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QH68_9SPHI Length = 229 Score = 102 bits (254), Expect = 1e-20, Method: Composition-based stats. Identities = 46/230 (20%), Positives = 80/230 (34%), Gaps = 63/230 (27%) Query: 1 MRRFFWLVAAALLLAGCAGEKGI-----------VEKEGYQLDTRRQAQA-----AYPRI 44 +R +AA L L C+ + + E++ LD + Y + Sbjct: 10 LRCQLACIAAFLSLTVCSAQPPVFRIIEKPIVFDEERKQLSLDYLARRHGVQQAEPYIKP 69 Query: 45 KVLVIHYTA-DDFDSSLATLT--------DKQVSSHYLVPAVPPRYNGKPRIWQLVPEQE 95 K++V+H+TA ++ D Q +S + VP + I++L+P+ Sbjct: 70 KMIVLHWTAVPTLRAAFDLFNPSVLTGRADLQAASRLNIS-VPFLVDRDGTIYRLLPDTV 128 Query: 96 LAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIAR 155 A H LN +IGIE AQ+ A + L + + R Sbjct: 129 FARHC--------IGLNHCAIGIENVGNDN-----------LTDAQLDANVQLVRYLKQR 169 Query: 156 YHIKPENVVAHADI-----AP----------QRKDDPGPLFPWQQLAQQG 190 Y I E ++ H + P K DPG F + + ++ Sbjct: 170 YAI--EYLIGHYEYKDFIGTPLWKETDSTYLTGKTDPGREF-MKNVRKRV 216 >UniRef50_A3ICX8 XlyB n=3 Tax=Bacillaceae RepID=A3ICX8_9BACI Length = 236 Score = 102 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 52/162 (32%), Gaps = 26/162 (16%) Query: 26 KEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDS----SLATLTDKQVSSHYLVPAVPPRY 81 + + + +H TA+D + S + QVS H V Sbjct: 7 QTFLPSSKYPIKAPYTMVPQYITVHNTANDAPAVNEISYMIGNNNQVSYHVSVD------ 60 Query: 82 NGKPRIWQLVPEQELAWHAGISAWRGATRL----NDTSIGIELENRGWQKSAGVKYFAPF 137 + Q +P AWH G N SIG+E+ + KS GV+Y Sbjct: 61 --DKEVIQAIPFNRNAWHCGDGGGNSDPNALKKGNRISIGVEIC---YSKSGGVRYGVAE 115 Query: 138 EPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGP 179 E A + ++ +Y + V H D K P Sbjct: 116 ENA-----VQYIAKLLKQYGWGIDRVKKHQDWNG--KYCPHR 150 >UniRef50_C8VXP6 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Peptococcaceae RepID=C8VXP6_DESAS Length = 208 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 56/158 (35%), Gaps = 32/158 (20%) Query: 38 QAAYP-RIKVLVIHYTADDFDSSLATLT-------DKQVSSHYLVPAVPPRYNGKPRIWQ 89 + P K + +H T + + A + H+ V RI Q Sbjct: 16 RPGNPMTPKYITVHNTGNTAKGADALAHAAFLKNSNDSTGWHFTVD--------DKRIVQ 67 Query: 90 LVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLA 149 +P E AWHA G N +SIGIE+ +E A+ I L Sbjct: 68 HIPCWENAWHATDGHGPG----NVSSIGIEICVNSDG---------DYEKAE-ANAIELI 113 Query: 150 KDIIARYHIKPENVVAHADIAPQRKDDPGPLFP-WQQL 186 + ++ +Y I N+V H P K P + P W + Sbjct: 114 RYLMDKYKIPLTNIVPHQKWYPA-KYCPYKILPRWNEF 150 >UniRef50_B8HPP1 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HPP1_CYAP4 Length = 288 Score = 101 bits (251), Expect = 3e-20, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 68/206 (33%), Gaps = 37/206 (17%) Query: 28 GYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQ------VSSHYLVPAVPPRY 81 G + + ++V+H T S++ Q S H L+ Sbjct: 91 GPRFSQDVYGRPVRNAP-LVVLHETVGSGSSAIQMFRSPQPDESRQASYHALIL------ 143 Query: 82 NGKPRIWQLVPEQELAWHAGISAWRGATR-------------LNDTSIGIELENRGWQKS 128 I LVP A+ AG S +RGA +N+ + I LE + Sbjct: 144 -RDGTIVYLVPGTMRAFGAGNSIFRGANGPEAVKTHPRFPASVNNFAYHISLETPPNGNN 202 Query: 129 AGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHA--DIAPQRKDDPGPLFPWQQL 186 ++ + P Q Q+L L R + + + H D + R DP F +L Sbjct: 203 NASRHSG-YTPNQYQSLAVLTA--CTR--VPSDRITTHKAVDRSGSR-MDP-RSFD-DRL 254 Query: 187 AQQGIGAWPDAQRVNFYLAGRAPHTP 212 ++ + + Q + A P Sbjct: 255 FRRLLDVYLQNQPLIDACAANPWTRP 280 >UniRef50_A9VVT9 N-acetylmuramoyl-L-alanine amidase n=50 Tax=root RepID=A9VVT9_BACWK Length = 311 Score = 101 bits (251), Expect = 3e-20, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 56/166 (33%), Gaps = 29/166 (17%) Query: 32 DTRRQAQAAYPRIKVLVIHYTADDFDS----SLATLTDKQVSSHYLVPAVPPRYNGKPRI 87 + + +H T +D + + D QVS H V Sbjct: 11 SKYGTKCPYTMNPEFITVHNTYNDATAENEVAYMIRNDNQVSFHIAVD--------DKEA 62 Query: 88 WQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIP 147 Q +P + AWH G G N SIG+E+ + + G +Y+ + A I Sbjct: 63 VQGIPLERNAWHCGD----GGGNGNRKSIGVEIC---YSLNGGDRYYKAEDNAAI----- 110 Query: 148 LAKDIIARYHIKPENVVAHADIAPQRKDDPGPLF---PWQQLAQQG 190 + ++ +Y+I V H K P + W + ++ Sbjct: 111 VVAQLMKQYNIPINKVRTHQSWNG--KYCPHRMLAEGRWNRFIERV 154 >UniRef50_A8RYS3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RYS3_9CLOT Length = 329 Score = 101 bits (251), Expect = 3e-20, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 66/187 (35%), Gaps = 42/187 (22%) Query: 21 KGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLT-------------DKQ 67 VE++ + + + ++ +VIHY A+ ++ Sbjct: 158 PDYVEQDFIRKNIFSRPDVGRQKVDKIVIHYVANPGSTAKNNRDYFDSLADQDPQKSGSS 217 Query: 68 VSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQK 127 SSH++V + + Q +P E+A+ LN+T++ IE+ + Sbjct: 218 ASSHFVVGL-------EGEVIQCIPVNEIAYA--------NAPLNNTTVAIEVCHPDDSG 262 Query: 128 SAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFP----W 183 F A ++L+ L + + + P +V+ H D+ K P W Sbjct: 263 K--------FNDATYESLVDLTAFLCRQLKLTPGDVIRHYDV--NEKLCPKYYVEHEDAW 312 Query: 184 QQLAQQG 190 +Q + Sbjct: 313 EQFLKDV 319 >UniRef50_B5GCG4 Putative uncharacterized protein n=1 Tax=Streptomyces sp. SPB74 RepID=B5GCG4_9ACTO Length = 325 Score = 100 bits (250), Expect = 4e-20, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 65/219 (29%), Gaps = 22/219 (10%) Query: 18 AGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVS---SHYLV 74 A +VE G++ +R + + ++IH+TA ++ + +H L+ Sbjct: 3 AEGLDVVEHPGWRTHSRTAPGRPWGPVHGVLIHHTAGRSSAATVWGGRSNLPGPLAHGLL 62 Query: 75 PAVPP-RYNGKPRIWQLVPEQELAW---------HAGISAWRGATRLNDTSIGIELENRG 124 R P + A+ H S G N G+E+EN G Sbjct: 63 AKSGVVTVTSAGRANHAGPVAKNAFAAVLAESAKHPRPSVASGTVDGNTCFYGLEIENLG 122 Query: 125 WQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQ 184 P+ AQ A + A + + + V H + + + K DP F Sbjct: 123 DGAD-------PYPDAQYDAAVRWAAALCRAHGWSAHSAVGHKETSVEGKPDP--SFDMH 173 Query: 185 QLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLA 223 + N P T L Sbjct: 174 DFRRAVAERLAHGPDWNPLEESDMPSTLGLYDDTPRTLR 212 >UniRef50_C0QM08 Putative N-acetylmuramoyl-L-alanine amidase AmpD n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QM08_DESAH Length = 439 Score = 100 bits (250), Expect = 4e-20, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 79/205 (38%), Gaps = 40/205 (19%) Query: 2 RRFFWLVAAALLLAGCAGEKGIVEKEGYQ------LDTRRQAQAAYPRI-----KVLVIH 50 R L+ L+ G G+ + Y+ +D + + + + +++H Sbjct: 11 RWMIPLICCVFLITGMPGKSFSYSQSDYRKFKSDIIDYQGHLNPKFKKKSRKKTRYIIVH 70 Query: 51 YTADDFDSSLATLTD----------KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHA 100 + ++L +++ ++Y++ +Q++ +Q + HA Sbjct: 71 TSELGLSATLRVVSEGKQFKNGRSTPGGHANYVI-------ARNGVTYQIMDKQFRSDHA 123 Query: 101 GISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKP 160 G+S W G ++ S+GIEL ++AP AQ +++ L + Y + Sbjct: 124 GLSMWNGQNDISSVSLGIELVG---------HHYAPLTSAQYRSVAMLIDMLQKAYGLDD 174 Query: 161 ENVVAHADIAPQRKDDPGPLFPWQQ 185 + V+ H+ +A R P P F Sbjct: 175 KAVLTHSQVAYGR---PNPWFNENH 196 >UniRef50_A7VR21 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VR21_9CLOT Length = 214 Score = 100 bits (250), Expect = 4e-20, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 55/158 (34%), Gaps = 33/158 (20%) Query: 27 EGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK-------QVSSHYLVPAVPP 79 Y + ++ + IH TA+ + + A +VS HY V Sbjct: 63 TAYIPEDSPGRPGVLRTVESITIHETANTSEGADAEAHSDYLSTTSDEVSWHYTVD---- 118 Query: 80 RYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEP 139 +I+Q +P+ E AWH+G N +SIGIEL Sbjct: 119 ----DHQIYQHLPDNEEAWHSGD------REGNHSSIGIELCVNADGNF----------D 158 Query: 140 AQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDP 177 ++ L ++ Y + ++V H D KD P Sbjct: 159 QTMENAAKLTAFLLKEYDLTIDDVKQHYDFNG--KDCP 194 >UniRef50_UPI0001BCD943 Peptidoglycan-binding domain 1 protein n=2 Tax=Aeromicrobium marinum DSM 15272 RepID=UPI0001BCD943 Length = 288 Score = 100 bits (250), Expect = 4e-20, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 73/237 (30%), Gaps = 43/237 (18%) Query: 23 IVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDS--SLATLTDKQVSS--------HY 72 +VE G+ + + + + + H+TAD S A LT ++ H Sbjct: 16 VVEVPGW----KHEGRPGTFSPRGVAAHHTADTLSDHYSGAELTRREEDYARIGLSTGHR 71 Query: 73 LVPAV--PPRYNGKPRIWQLVPEQELAWHAGI----SAWRGATRLNDTSIGIELENRGWQ 126 +P ++ V A HAG W A N +IGIE N ++ Sbjct: 72 ELPGPLCQIGLGRDGTVY--VIAAGRANHAGKVRSWGGWVSAGDGNTQAIGIEAMNSAYE 129 Query: 127 KSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDP---GPLFPW 183 + Q +A L + Y V AH +I+ K DP G L Sbjct: 130 G---------WSDTQSRAYHRLCAALCDHYGWPRSRVAAHGEISTSGKWDPGVNGRLIDM 180 Query: 184 QQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARY-GYDVKPDMTPREQR 239 G +T LAR YD++P + + Sbjct: 181 NAFRAAVAGV--------TQGDDDMQNTEEQYEIFRHFLARALRYDIRPLGAGADWK 229 >UniRef50_B4ALM5 N-acetylmuramoyl-L-alanine amidase CwlA (Cellwall hydrolase) (Autolysin) n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4ALM5_BACPU Length = 273 Score = 100 bits (250), Expect = 4e-20, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 72/271 (26%), Gaps = 67/271 (24%) Query: 45 KVLVIHYTADDFDS----SLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHA 100 + + IH TA+D + S S H+ V + Q +P AWH+ Sbjct: 26 EYITIHNTANDAAAKSEISYMINNTSSTSYHFAVD--------DKEVIQAIPLDRNAWHS 77 Query: 101 GISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKP 160 G N SI IE+ + + I ++ Sbjct: 78 GDGTNGTG---NRKSIAIEICYSQSGGTRYKTAE--------KLAIQFVAQLLKERSWGV 126 Query: 161 ENVVAHADIAPQRKDDPGPLF---PWQQLAQQG------IGAWPDAQRVNFYLAGRAPHT 211 + V H D K P + W +G + + + P Sbjct: 127 DRVRKHQDWNG--KYCPHRILSEGRWSSFKAAIEKELKALGGKTSSSKPKKTSSATTPKK 184 Query: 212 PVD----------------------TASLLELLAR-YGY-------DVKPDMTPREQRRV 241 + E +A Y Y + + Sbjct: 185 KASKKAYKLPTGIFKVKAPLMKGDAVKQIQEAIAALYFYPDKGAKNNGIDGYYGPKTANA 244 Query: 242 IMAFQ-MHFRPTLYNGEADAETQAIAEALLE 271 + FQ MH +G +T+A EALL+ Sbjct: 245 VKRFQLMH--GLAADGIYGPKTKAKLEALLK 273 >UniRef50_A7VT90 Putative uncharacterized protein n=2 Tax=Clostridium leptum DSM 753 RepID=A7VT90_9CLOT Length = 316 Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 50/169 (29%), Gaps = 28/169 (16%) Query: 31 LDTRRQAQAAYPRIKVLVIHYTADDFDSS----LATLTDKQVSSHYLVPAVPPRYNGKPR 86 +V+H TA+D ++ D +VS HY V Sbjct: 10 PSRYSIKCPYAMTPTRVVVHNTANDAPAANEIAYMIRNDNEVSFHYAVD--------DQE 61 Query: 87 IWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALI 146 + Q VPE W+AG +G N I +E+ F A+ Q Sbjct: 62 VVQGVPENRNTWNAGDGNGKG----NREGIAVEICYSLSGG-------EKFTKAE-QNAA 109 Query: 147 PLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFP--WQQLAQQGIGA 193 I+ RY + V H D K P W + + Sbjct: 110 EFIASILKRYGWGMDKVTKHQDYNG--KYCPHRTLDLGWDRFLKMVEAH 156 >UniRef50_C9Y7L0 1,6-anhydro-N-acetylmuramyl-L-alanine amidase ampD n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y7L0_9BURK Length = 196 Score = 100 bits (249), Expect = 5e-20, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 72/211 (34%), Gaps = 50/211 (23%) Query: 13 LLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHY 72 L + G + + + A + ++VIH + Sbjct: 23 LPNASGWDAGWWSEAQHVPSPNFGPRPASAVVDLVVIHSIS------------------- 63 Query: 73 LVPAVPPRYNGKPRIWQLVPEQ-----------ELAWHAGISAWRGATRLNDTSIGIELE 121 +PP G P + QL WHAG S +R ND SIGIELE Sbjct: 64 ----LPPGVYGGPEVQQLFTNTLDWDAHPXXXXXXXWHAGKSCYRDRDHCNDDSIGIELE 119 Query: 122 NRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLF 181 + F P Q ++L L + I Y I + + H IAP RK DPGP F Sbjct: 120 GTEEDR---------FTPPQYESLHRLCRAIAQNYQI--QYLAGHEHIAPGRKTDPGPGF 168 Query: 182 PWQQLAQQGIGAWPDAQRVNFYLAGRAPHTP 212 W +L WP+ +F T Sbjct: 169 EWSELK-----LWPEISGWHFPSGVPQSDTG 194 >UniRef50_Q65KE6 N-acetylmuramoyl-L-alanine amidase n=3 Tax=root RepID=Q65KE6_BACLD Length = 311 Score = 100 bits (249), Expect = 6e-20, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 61/212 (28%), Gaps = 37/212 (17%) Query: 20 EKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSS----LATLTDKQVSSHYLVP 75 V+K K + H TA+D ++ + QVS H+ V Sbjct: 1 MAISVKKNLVASSKYSVKCPYSMDAKYITFHNTANDASAANEIAYMIRNNNQVSYHFAVD 60 Query: 76 AVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFA 135 + Q +P AWH G G N +SIG+E+ Sbjct: 61 --------DKEVVQGIPTNRNAWHCGDENGPG----NRSSIGVEVCYSKSGG-------- 100 Query: 136 PFEPAQIQALIPL----AKDIIARYHIKPENVVAHADIAPQRKDDPGPLFP---WQQLAQ 188 A+ +A L ++ + V H D + K P + W + Sbjct: 101 ----AKYKAAEKLAIKFIAQLLTERGWGVDRVKKHQDWSG--KYCPHRVLDEGRWGAVKA 154 Query: 189 QGIGAWPDAQRVNFYLAGRAPHTPVDTASLLE 220 + A AP T ++ + Sbjct: 155 AIAAELKALGGKSSSPAKSAPKASGKTYTVKK 186 >UniRef50_B9XPB1 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=bacterium Ellin514 RepID=B9XPB1_9BACT Length = 586 Score = 100 bits (249), Expect = 6e-20, Method: Composition-based stats. Identities = 36/195 (18%), Positives = 57/195 (29%), Gaps = 45/195 (23%) Query: 22 GIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQ----VSSHYLVP-- 75 + + Y + LVIH + S+++ + VS +Y V Sbjct: 60 PAIWHQAYAGHWYTSGHGH----QFLVIHDMEGYYLSTISYIQGGGGPEKVSINYCVNGI 115 Query: 76 AVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFA 135 + I Q+V E AWH G W N G E E A Sbjct: 116 KDNSSDSPAGEITQMVREANYAWHVG--CW------NTWMAGTEHEGFANNP-------A 160 Query: 136 PFEPAQIQALIPLAKDIIARYHIKPE--NVVAHADI------------------APQRKD 175 + A QA L + + + Y I + +++AH + Sbjct: 161 WYSEAMYQASAGLQRHMASAYGIPIDRNHIIAHGEWQNASWKTWMAANYPSIDTTCNSHT 220 Query: 176 DPGPLFPWQQLAQQG 190 DPG + W Sbjct: 221 DPGIYWDWTHFMDLV 235 >UniRef50_Q05S34 N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Synechococcus sp. RS9916 RepID=Q05S34_9SYNE Length = 292 Score = 100 bits (248), Expect = 7e-20, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 62/159 (38%), Gaps = 25/159 (15%) Query: 44 IKVLVIHYTADDFDSSLATLTDK------QVSSHYLVPAVPPRYNGKPRIWQLVPEQELA 97 +++V+H T +++ QVS H L+ ++VP+Q A Sbjct: 120 PELIVLHETVISEPATVNLFQTPHPRDEDQVSYHMLIAT-------DGARLRIVPDQNRA 172 Query: 98 WHAGISAWRGAT---------RLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPL 148 + +G+SA+ AT +N+ ++ + L + + + +Q ++L Sbjct: 173 YGSGMSAFGDATQRRQPGRVGSINNVALHVSLVTPADGRGNTDAHSG-YTNSQYRSLAAQ 231 Query: 149 AKDIIARYHIKPENVVAHADIAPQR-KDDPGPLFPWQQL 186 A+Y I V HA + R + DP F W + Sbjct: 232 VLLWQAKYGIPLTRVTTHAAVDRSRTRYDP-RSFRWDRF 269 >UniRef50_Q160K6 N-acetyl-anhydromuramyl-L-alanine amidase, putative n=2 Tax=Roseobacter RepID=Q160K6_ROSDO Length = 352 Score = 100 bits (248), Expect = 8e-20, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 68/194 (35%), Gaps = 49/194 (25%) Query: 37 AQAAYPRIKVLVIHYTADDF-DSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQE 95 +V+HYTA ++ L + +S + LV + Q Sbjct: 57 GAGNPMTPTRIVVHYTAGSSLSGAVNALKSRGLSYNVLVDL-------DGSLHQARAFNR 109 Query: 96 LAWHAGISAW------RGATRLNDTSIGIELENRGWQKS--------------------- 128 A HAG S + + + LN ++I I L N G+ + Sbjct: 110 RAGHAGRSNFKATSGLKNQSSLNGSTIAISLVNLGFHEHFSGGHWWYARSKGKLRGPKVV 169 Query: 129 -------------AGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKD 175 V ++ P+ AQ+ + L + ++A+Y +V H D++ K Sbjct: 170 DVEANKMSSIYNPGLVMHWVPYTDAQVASCEALIEALVAKYP-SITEIVGHDDVSINAKL 228 Query: 176 DPGPLFPWQQLAQQ 189 DPGP P Q ++ Sbjct: 229 DPGPALPTQAWREK 242 >UniRef50_D0LV42 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LV42_HALO1 Length = 655 Score = 100 bits (248), Expect = 8e-20, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 82/256 (32%), Gaps = 61/256 (23%) Query: 30 QLDTRRQAQAAYPRIKVLVIHYTA-DDFDSSLATLTD-KQVSSHYLVPAVPPRYNGKPRI 87 + +A I+ ++H+ L + + +S H+L + I Sbjct: 67 RYGESPPLEAVQNSIRQFIVHHDGCPSAKVCFNVLHNERGLSCHFL-------MDNDGTI 119 Query: 88 WQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAP----------- 136 +Q + +A+HA N SIGIE+ NRG K Y Sbjct: 120 YQTMDLSLMAYHAA--------GFNARSIGIEICNRGDAKRDPNYYSKKGQKREATTVRI 171 Query: 137 ---------FEPAQIQALIPLAKDIIARYH------------------IKPEN----VVA 165 F P QI+A+ L++ I I ++ Sbjct: 172 HGHVYKCFRFTPQQIEAMQALSQGISRALPNLPLEYPQDQPGQQAWGEIPNAAQFAGILG 231 Query: 166 HADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARY 225 H +RK DPGP F +++L ++ G+ V + + LE + R Sbjct: 232 HYHTT-RRKWDPGP-FDFKELCEKSRGSLCFPIFVKKQERSSDRPVVPEDSESLEEITRA 289 Query: 226 GYDVKPDMTPREQRRV 241 YD+ + V Sbjct: 290 MYDLNEKQSEGGYFPV 305 >UniRef50_A5IAD5 N-acetylmuramoyl-L-alanine amidase; amidase 2 n=7 Tax=Bacteria RepID=A5IAD5_LEGPC Length = 232 Score = 100 bits (248), Expect = 8e-20, Method: Composition-based stats. Identities = 47/223 (21%), Positives = 76/223 (34%), Gaps = 68/223 (30%) Query: 4 FFWLVAAALLLAGCAGEKGIVEKE------------GYQLDTRR-QAQAAYPRIKVLVIH 50 F ++A+ C + I++K YQL +++ K++V+H Sbjct: 22 LFAFISASGHAFSCYDPQTIIQKPIQFDKKRIALTREYQLTHYGIDSESIEIEPKMIVLH 81 Query: 51 YTA-DDFDSSLATLT----------------DKQVSSHYLVPAVPPRYNGKPRIWQLVPE 93 +T D++ D VSSH+LV I+QL+PE Sbjct: 82 WTCIPSLDTTFRIFDPPALPTSSPRRNELPGDLNVSSHFLVD-------RDGTIYQLMPE 134 Query: 94 QELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDII 153 +A H LN +IGIE GV Q++A L + Sbjct: 135 TWMARHV--------IGLNHYAIGIENIG-------GVDSKDDLTDEQVKANAFLVCYLK 179 Query: 154 ARYHIKPENVVAHADI------------AP---QRKDDPGPLF 181 +Y + + ++ H + P K DPGP F Sbjct: 180 NKYP-QIKYLIGHNEYLQYKGTALWLEKDPNYQTDKTDPGPTF 221 >UniRef50_B9XKL0 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=bacterium Ellin514 RepID=B9XKL0_9BACT Length = 594 Score = 99.7 bits (247), Expect = 9e-20, Method: Composition-based stats. Identities = 38/250 (15%), Positives = 67/250 (26%), Gaps = 55/250 (22%) Query: 4 FFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATL 63 +L +AA + K+ Y + VIH + ++++ + Sbjct: 22 LGFLGSAAFTAHAQPDYAPAIWKQAYAGHWYTSGHGH----QFCVIHDMEGYYLTTISYI 77 Query: 64 TDKQ----VSSHYLVPAVPPRYNG------------KPRIWQLVPEQELAWHAGISAWRG 107 VS +Y V + + I Q+V EQ A+H G W Sbjct: 78 QGGGGPQSVSINYCVNGLKNGSDSSGHVENNPSDSPAGEITQMVREQYYAYHVG--CW-- 133 Query: 108 ATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPE--NVVA 165 N G E E A + A +A L + + Y I + +++A Sbjct: 134 ----NLWMFGTEHEGFVNNP-------AWYTEAMYRASADLQRHLCDNYGIPKDRNHIIA 182 Query: 166 HADI------------------APQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGR 207 H + DPG + W Q + Sbjct: 183 HGEWQNASWKTYMATNYASIDTTCNTHTDPGVYWNWSHFMQLITNGPSITAQPANISIAA 242 Query: 208 APHTPVDTAS 217 + + Sbjct: 243 GSNATFSVVA 252 >UniRef50_B5LGB7 Amidase n=10 Tax=unclassified Siphoviridae RepID=B5LGB7_9CAUD Length = 287 Score = 99.7 bits (247), Expect = 9e-20, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 57/197 (28%), Gaps = 55/197 (27%) Query: 35 RQAQAAYPRIKVLVIHYTADDFD-----------SSLATLTDK--QVSSHYLVPAVPPRY 81 + + + +VIH T D S+ S+HY+ Sbjct: 8 HHSAGSNSPVNRVVIHATCPDVGFPSASRKGRAVSTANYFASPSSGGSAHYVCDIR---- 63 Query: 82 NGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQ 141 Q + E + WHA N S+GIE+ G ++ + Q Sbjct: 64 ----ETVQCLSESTIGWHA---------PPNPHSLGIEICADGGSHASFRVPGHAYTREQ 110 Query: 142 I---------QALIPLAKDIIARYHIKPEN------------VVAHADIAP----QRKDD 176 + L + + +Y++ V H D+ DD Sbjct: 111 WLDPRVWPAVERAAVLCRQLCDKYNVPKRKLSAADLKAGKRGVCGHVDVTDAWHQSDHDD 170 Query: 177 PGPLFPWQQLAQQGIGA 193 PGP FPW + G Sbjct: 171 PGPWFPWDRFMAVVNGH 187 >UniRef50_A3K174 Spore cortex-lytic enzyme n=2 Tax=Sagittula stellata E-37 RepID=A3K174_9RHOB Length = 335 Score = 99.7 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 72/245 (29%), Gaps = 32/245 (13%) Query: 45 KVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISA 104 +++H+TA +S H LV G + + + + A Sbjct: 5 NRIILHWTAGGGRASAVDRQ----HYHRLVEHDGRIVPGTEALADNIVTSDGDYAA---- 56 Query: 105 WRGATRLNDTSIGIELEN-RGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPEN- 162 LN SIG+ L R + +P Q+ A L ++ + I Sbjct: 57 --HTRNLNTGSIGVALCGMRDAIEVPFSPGPSPLTEVQVDAACALVAELCRAHGIPVTRE 114 Query: 163 -VVAHADIAPQ------RKDD----P------GPLFPWQQLAQQGIGAWPDAQRVNFYLA 205 V+ HA++ P K D P G L + +A + Sbjct: 115 TVLTHAEVQPTLGVRQLGKWDITRLPYKPDVVGAYPVGDYLRSKIKALLGEAAPASNRPV 174 Query: 206 GRAPHTPVDTASLLELLARYGY--DVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQ 263 R D L E LA Y + R ++AFQ + A +T Sbjct: 175 LRFGDQGADVRVLQEDLAGLRYFAGRRDGRFDTLTRAALLAFQAD-NGLATDAVAGQQTW 233 Query: 264 AIAEA 268 A Sbjct: 234 AALAR 238 >UniRef50_C7MQ69 Negative regulator of beta-lactamase expression n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MQ69_SACVD Length = 311 Score = 99.7 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 79/276 (28%), Gaps = 43/276 (15%) Query: 1 MRRFFWLVAAALLLAGCAGEKGIVEK---------EGYQLDTRRQAQAA---YPRIKVLV 48 +R + A LA + + + R + +V Sbjct: 14 LRSGLAVTAMGTALAAVPAQASATDSRRVEAPHIYDTGNWQARPPREPITLLNHPPTYIV 73 Query: 49 IHYTADDFDSSLATLTDKQV-----------SSHYLVPAVPPRYNGKPRIWQLVPEQELA 97 +H+T + ++ +L S+ ++ + I + A Sbjct: 74 VHHTVEPGNTDDYSLDRAFAISRSIQNFHMDSNGWIDTGQQFTISRGGYITEGRHRSLEA 133 Query: 98 WHAGISAWRGATRLNDTS--IGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIAR 155 G GA N S IGIE E + + +L+ L I ++ Sbjct: 134 LTGGTQHVLGANVANHNSEVIGIENEGLYMEVDVPQTLW--------DSLVSLVAYIASQ 185 Query: 156 YHIKPENVVAHADIAPQRKDDPGP--LFPWQQLAQQG---IGAWPDAQRVNFYLAGRAPH 210 Y+I PE + H D PG +L Q +G L R Sbjct: 186 YNISPEMIRGHRDFNST--ACPGDVLYARLPELRQAVADRLGVSFREPGSTPLL--RPGD 241 Query: 211 TPVDTASLLELLARYGYDVKP-DMTPREQRRVIMAF 245 D L +GYDV + + R + AF Sbjct: 242 RSEDVLLAQRRLRAHGYDVPAHGVFDQATREAVAAF 277 >UniRef50_B5H952 Phage protein n=4 Tax=Streptomyces RepID=B5H952_STRPR Length = 287 Score = 99.7 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 51/296 (17%), Positives = 81/296 (27%), Gaps = 48/296 (16%) Query: 7 LVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK 66 + A LL A +VE ++ R P + ++IH+T SS L Sbjct: 1 MSADKLLRALRNEGLRVVEHRSWRTHNRNHKGPWGP-VNGVMIHHTVTSGTSSSVELCYN 59 Query: 67 QVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISA-----------------WRGAT 109 SS P ++ LV A HAG+ T Sbjct: 60 GHSS-LPGPLCHGVIAKDGTVY-LVG-NGRANHAGLGDDDVLRAVINESATLPADNEANT 116 Query: 110 RLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADI 169 N G E N G K P+ AQ++A+ A I + +V+ H + Sbjct: 117 DGNRHFYGFECVNLGDGKD-------PWPAAQLEAIEKAAAAICRAHGWSQRSVIGHKEW 169 Query: 170 APQRKDDPGPLFPWQQLAQQG---IGAWPDAQRVNFYLAGRAPHTPVD---------TAS 217 P K DP F + + +G P + Sbjct: 170 QPG-KVDP-RGFTMDAMRSRIKERLGGKPSGPTTPPAPTYEPFPGAAFFQVGRRSAVITA 227 Query: 218 LLELLARYGYDVKPDMTPREQRRV----IMAFQMH--FRPTLYNGEADAETQAIAE 267 + L G E A+Q + + +G + + Sbjct: 228 MGRRLVAEGCGRYEQGPGPEWTEADRKSYAAWQRKLGYSGSDADGIPGRTSWDKLK 283 >UniRef50_A0M513 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Gramella forsetii KT0803 RepID=A0M513_GRAFK Length = 223 Score = 99.7 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 49/233 (21%), Positives = 81/233 (34%), Gaps = 71/233 (30%) Query: 2 RRFFWLVA--AALLLAGCAGEKGIVEKEGYQLDT---------RRQA---QAAYPRIKVL 47 R+FF LV L+L C + I + ++ D R + K++ Sbjct: 4 RKFFGLVGSFILLILFACESSRIIEKPIDFEKDRIELTLEYLKNRYGLEQNSPEIDPKMI 63 Query: 48 VIHYTA-DDFDSSLATLTDK---------------QVSSHYLVPAVPPRYNGKPRIWQLV 91 V+H+T + S + VSSH+LV I++L+ Sbjct: 64 VLHWTEIPTLEDSFRAFKNSKLPQSREAISGASQLNVSSHFLVDK-------NGAIYRLM 116 Query: 92 PEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKD 151 PE +A H LN T+IG+E P AQ+ + I L Sbjct: 117 PETVMARHV--------IGLNHTAIGVENVG--------GTKDTPLTAAQVASNIWLVNY 160 Query: 152 IIARYHIKPENVVAHADI-------------APQR--KDDPGPLFPWQQLAQQ 189 + +Y+I + V+ H + + R K DPG F +++ Sbjct: 161 LSDKYNI--QYVIGHYEYTNFEGHDLWLEKDSGYRTMKVDPGEEF-MKEVRNA 210 >UniRef50_C7PLI7 Peptidase C14 caspase catalytic subunit p20 n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PLI7_CHIPD Length = 1316 Score = 99.3 bits (246), Expect = 1e-19, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 80/251 (31%), Gaps = 69/251 (27%) Query: 29 YQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLT--DKQVSSHYLVPAVPPRYNGKPR 86 Y+ A + +V+H+TA + S + +LT D+ VS +++ Sbjct: 40 YKPGRSNYFYPATHNKERIVLHFTAGNLRSDMQSLTTQDRHVSVPFVI-------ARDGT 92 Query: 87 IWQLVPEQELAWHAGIS-AWRGATRLND-TSIGIELENRGW------------------- 125 I+QL P + H G +G D SIGIEL N + Sbjct: 93 IYQLFPSANWSGHIGPGLGNQGTQNAQDKVSIGIELSNYAYLVPHDGVLETIYSRQPVNG 152 Query: 126 ---------------------QKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKP---- 160 Q Y+A + P QI++ I L + + A+Y+I Sbjct: 153 KPGPVDEYCALSNSAAYIKINQPFRDQVYYAAYTPEQIESTIILLRYLTAKYNIPRQFLP 212 Query: 161 --------------ENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAG 206 + +V+H + K D GP F W L A L+ Sbjct: 213 ADKRYTTTNDVLTFKGIVSHINYRASGKWDIGPAFDWNTLISGVTAAEFTPATTARSLSF 272 Query: 207 RAPHTPVDTAS 217 A S Sbjct: 273 AARELSPAVTS 283 >UniRef50_Q925X1 Lin2374 protein n=2 Tax=Listeria RepID=Q925X1_LISIN Length = 316 Score = 99.3 bits (246), Expect = 1e-19, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 65/171 (38%), Gaps = 40/171 (23%) Query: 30 QLDTRRQAQAAYP--RIKVLVIHYTADDFDSS------LATLTDKQVSSHYLVPAVPPRY 81 ++ + ++ Y R+ +V+HYTA+ S+ L ++ S+H + Sbjct: 8 YINKNQFSRPGYKLLRVSKIVMHYTANPGASADNHRRYFRDLKERYASAHIFID------ 61 Query: 82 NGKPRIWQLVPEQELAWHAGI------------SAWRGATRLNDTSIGIELENRGWQKSA 129 ++P E+A+HA S +RG N TSIGIE+ Sbjct: 62 --DNEAICIIPLNEVAYHANERSCKLTALQASTSYYRG-GNANLTSIGIEMC-------- 110 Query: 130 GVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPL 180 + A + +A ++ Y + +++ H D+ K+ P P Sbjct: 111 -LDKNGNITAATFNRSVDVAAELCKTYDLTASDIIRHYDVTG--KNCPAPW 158 >UniRef50_A9AWE2 N-acetylmuramoyl-L-alanine amidase family 2 n=2 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AWE2_HERA2 Length = 356 Score = 99.3 bits (246), Expect = 1e-19, Method: Composition-based stats. Identities = 42/243 (17%), Positives = 72/243 (29%), Gaps = 30/243 (12%) Query: 41 YPRIKVLVIHYTADDFDSSLATLTDKQVS-----SHY----LVPAVPPRYNGKPRIWQLV 91 + +V+H+T + + QV+ SH+ + + I + Sbjct: 61 NQKPIGIVVHHTTNPNTNDFTRNKAWQVARQIQQSHFNRGWIDTGQQFTISRGGWIMEGR 120 Query: 92 PEQELAWHAGISAWRGAT--RLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLA 149 + G +GA N+T IGIE E + + + L+ L Sbjct: 121 HQSLSILQGGTKHVQGAHVDGHNETHIGIECEGLYMNVTPSLPLW--------NKLVALI 172 Query: 150 KDIIARYHIKPENVVAHADIAPQRKDDPG----PLFPWQQLAQQG-IGAWPDAQRVNFYL 204 I +Y + +V H D+ PG L P QL A + + Sbjct: 173 AYICQQYGLTANAIVGHRDLDST--SCPGDTLYSLLP--QLRTAVDTTLSGGAVGRMWPI 228 Query: 205 AGRAPHTPVDTASLLELLARYGYDVKPDM-TPREQRRVIMAFQMHFRPTLYNGEADAETQ 263 R ++ LL G + D + +FQ +G A T Sbjct: 229 LRRNTPATGLAKTMQYLLRARGATITADGAFGPGTETAVKSFQTA-NGLTSDGVVGAATW 287 Query: 264 AIA 266 Sbjct: 288 EKL 290 >UniRef50_D1WT65 N-acetylmuramoyl-L-alanine amidase family 2 n=11 Tax=Streptomyces RepID=D1WT65_9ACTO Length = 313 Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 50/315 (15%), Positives = 81/315 (25%), Gaps = 66/315 (20%) Query: 6 WLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTD 65 L A LL A A +VE G++ R A P + ++IH+T ++ L Sbjct: 4 PLTADRLLAALHAEGVTVVEHPGWRTHDRNHKGAWGP-VNGVMIHHTVSSGSAASVALCR 62 Query: 66 KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWR------------------- 106 H +P + + A HAG Sbjct: 63 DG---HASLPGPLCQGVIDKAGTVHLISAGRANHAGGGDPDVLRRVVAEDYGHRPPAPRA 119 Query: 107 -----GATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPE 161 GA N G E N G + P+ Q+ A+ + I + Sbjct: 120 HDGSAGAVDGNARFYGFECVNLGDGRD-------PWPAVQLDAIERASAAICRAHGWSAR 172 Query: 162 NVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTP--------- 212 +V+ HA+ + K DP F + + R P P Sbjct: 173 SVIGHAEWSAA-KVDP-RGFTMPSMRARVGSRLAAPARDTPTGPSAPPSKPGAPATPRYQ 230 Query: 213 --------------VDTASLLELLARYGYDVKPDMTPREQRRV----IMAFQMH--FRPT 252 ++ L+ G A+Q FR Sbjct: 231 PFPGAHFFTARPSSPVVTAMGRRLSAEGCGAYAVGPGPRWTEADRRSYAAWQRKLGFRGA 290 Query: 253 LYNGEADAETQAIAE 267 +G + + Sbjct: 291 EADGWPGRTSWNALK 305 >UniRef50_A5ZPJ2 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A5ZPJ2_9FIRM Length = 442 Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 46/314 (14%), Positives = 87/314 (27%), Gaps = 73/314 (23%) Query: 2 RRFFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQA---AYPRIKVLVIHYTADDFDS 58 ++ ++ + L + G + + + +VIH T + Sbjct: 156 KKIITILNSILTMNSGTSTSGKENTVKVNIKKMISKKNCYIGQNKPAYVVIHETDNWSKG 215 Query: 59 SLATLT-------DKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRL 111 + A + + HY V + I+Q + + AW G + Sbjct: 216 ANARAHALAMKNGNLAGTVHYYVDSE--------SIYQTLEHSDGAWAVGDGKGKYGI-T 266 Query: 112 NDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAP 171 N SI IE+ V + A + LA ++ +Y +++ H D Sbjct: 267 NRNSINIEIC---------VNPETDYYKA-VDKAEQLAAYLLKQYGWSTDHLKRHYD--A 314 Query: 172 QRKDDPGPLFP---WQQLAQ-------------------------QGIGAWPDAQRVNFY 203 RK P + W + +G G + + V Sbjct: 315 SRKHCPRRILDEGLWPGFVKKTAVYMGSASTNTSSNTATNTSTTTKGDGYMFEPKLVKL- 373 Query: 204 LAGRAPHTPVDTASLLELLARYGYDVKPDMT-------PREQRRVIMAFQMHFRP-TLYN 255 T L E+L G+ K T + +Q + + Sbjct: 374 -----GSTGTSVLLLQEILIARGFKGKNGKTLTLSRKADENTIYALKTYQKSRKGVLEAD 428 Query: 256 GEADAETQAIAEAL 269 G A +T A+ Sbjct: 429 GIAGEKTWKDLIAI 442 >UniRef50_P39800 N-acetylmuramoyl-L-alanine amidase xlyA n=4 Tax=Bacillus RepID=XLYA_BACSU Length = 297 Score = 98.6 bits (244), Expect = 2e-19, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 54/193 (27%), Gaps = 32/193 (16%) Query: 35 RQAQAAYPRIKVLVIHYTADDFDSSL-----ATLTDKQV--SSHYLVPAVPPRYNGKPRI 87 + +H TA+ + L + S H+ V I Sbjct: 14 NNRPGYAMTPLYITVHNTANTAVGADAAAHARYLKNPDTTTSWHFTVD--------DTEI 65 Query: 88 WQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIP 147 +Q +P E WHAG G N SIGIE+ F A Sbjct: 66 YQHLPLNENGWHAGDGNGSG----NRASIGIEICENADG---------DFAKAT-ANAQW 111 Query: 148 LAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFP-WQQLAQQGIGAWPDAQRVNFYLAG 206 L K ++A ++I NVV H + K+ P L W G V Sbjct: 112 LIKTLMAEHNISLANVVPHKYWSG--KECPRKLLDTWDSFKAGIGGGGSQTYVVKQGDTL 169 Query: 207 RAPHTPVDTASLL 219 + Sbjct: 170 TSIARAFGVTVAQ 182 >UniRef50_B8FLA2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FLA2_DESAA Length = 166 Score = 98.2 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 50/172 (29%), Gaps = 38/172 (22%) Query: 41 YPRIKVLVIHYTADDFDSSLATLTD---------KQVSSHYLVPAVPPRYNGKPRIWQLV 91 + + +VIH A D + A D + H+++ + + Sbjct: 3 GLKPEYIVIHTAAIDDPNCDAAHIDAVHRNDNGWDCIGYHFVILDDRHPQKNDGDLEKGR 62 Query: 92 PEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKD 151 H LND SIGI G APF Q++ L + Sbjct: 63 DINMPGAHV--------LGLNDRSIGICCVGHGD--------HAPFTEKQMETLCRTVSE 106 Query: 152 IIARY-HIKPENVVAHADIA------------PQRKDDPGPLFPWQQLAQQG 190 ++ Y I V+ H +I K PG + + Q Sbjct: 107 LMDAYGGIPLNRVIGHREINLLVAEGVLAAKYGTEKTCPGKMVDMDVIRQAI 158 >UniRef50_C3DAX2 N-acetylmuramoyl-L-alanine amidase n=10 Tax=Bacillales RepID=C3DAX2_BACTU Length = 323 Score = 97.4 bits (241), Expect = 4e-19, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 56/154 (36%), Gaps = 26/154 (16%) Query: 39 AAYPRIKVLVIHYTADDFDS----SLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQ 94 + + + +H T +D + S + VS H V Q +P Sbjct: 47 PNAMKPEFITVHNTYNDASAENEISYMIGNNNAVSFHVAVD--------DKEAVQGIPFD 98 Query: 95 ELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIA 154 AWHAG N SIG+E+ + S G +Y+ + A I + ++ Sbjct: 99 RNAWHAGDGN----GNGNRKSIGVEIC---YSLSGGDRYYKAEDNAAI-----VIAQLMK 146 Query: 155 RYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQ 188 +++I NV H + K P + +L Q Sbjct: 147 QFNIPISNVRTHKSWSG--KHCPHRMLDEGRLDQ 178 >UniRef50_A4BV20 N-acetylmuramoyl-L-alanine amidase, putative n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BV20_9GAMM Length = 236 Score = 97.0 bits (240), Expect = 6e-19, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 81/265 (30%), Gaps = 62/265 (23%) Query: 38 QAAYPRIKVLVIHYTADDFDSS----------LATLTDKQVSSHYLVPAVPPRYNGKPRI 87 +A + + IH +A D + + V H+ + + Sbjct: 4 KAPGREVDRIFIHCSASDRPEHDDISVMRDWHVNSRNWSDVGYHFFIKK-------DGTV 56 Query: 88 WQLVPEQEL-AWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALI 146 + P + + A AG N +I I L F AQ ++LI Sbjct: 57 QEGRPLERIPAAQAGN---------NAGTIAICL---------HGLTAERFTKAQYESLI 98 Query: 147 PLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQ-LAQQGIGAWPDAQRVNFYLA 205 L +I Y H +++ KD P +FP+++ L G+ A V+ + Sbjct: 99 RLCGEIDTAYG-GMVTFHGHREVS--TKDCP--VFPYREVLGLDAHGSSSLAPTVSPLTS 153 Query: 206 GRAPHTPV----------------DTASLLELLARYGYDVKPDM-TPREQRRVIMAFQMH 248 A P L +L+R G+ ++ D + + AFQ Sbjct: 154 DTADAIPTVPRPTEPLLRLMARGQPVLHLQAMLSRAGHILEEDGIFGQNTLAAVQAFQR- 212 Query: 249 FRPT-LYNGEADAETQAIAEALLEK 272 +G T A+ Sbjct: 213 -SQDLKADGIVGPRTWTALRAVSAA 236 >UniRef50_C9A1B6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A1B6_ENTGA Length = 316 Score = 97.0 bits (240), Expect = 6e-19, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 70/234 (29%), Gaps = 54/234 (23%) Query: 29 YQLDTRRQAQAAYPRIKVLVIHYTADDF------DSSLATLTDKQVSSHYLVPAVPPRYN 82 +++ + + RI+ L++HYTA++ S L S+H V Sbjct: 12 IRINKFSRPRIKNFRIEGLIMHYTANNGGTARNHKSYFNNLNGVYASAHLFVD------- 64 Query: 83 GKPRIWQLVPEQELAWHA--------GISAWRGAT---RLNDTSIGIELENRGWQKSAGV 131 ++P E+A+HA G + + N ++IGIE+ + Sbjct: 65 -DEEAICIIPLNEVAYHANDIQKYVNGQPYYPLRSIIGNANYSTIGIEMC---------L 114 Query: 132 KYFAPFEPAQIQALIPLAKDIIARYH-IKPENVVAHADIAPQRKDDPGPLF----PWQQL 186 Q + K++IA+Y I + + H D+ K+ P P ++ Sbjct: 115 DRNGKITEKTFQNTVKAVKELIAKYPNITRDKIWRHYDV--TSKNCPAPWVAKPSELERF 172 Query: 187 AQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRR 240 G P + + M Sbjct: 173 KDAVFG---KTNSSKPAEKPSKPSVKPSYTRI----------AEDGMFGPGTAN 213 >UniRef50_B9L0F4 N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0F4_THERP Length = 413 Score = 96.6 bits (239), Expect = 7e-19, Method: Composition-based stats. Identities = 48/245 (19%), Positives = 78/245 (31%), Gaps = 48/245 (19%) Query: 6 WLVAAALLLAGCAGEKG--IVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATL 63 ++ A +A AG+ + + + + + + IH TA++ + A Sbjct: 148 YVAAVRAFMAQHAGQPVAGVPLRLAWLPPSAPNRPGFPLQPAWITIHETANENPGADAEA 207 Query: 64 TDK---------QVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDT 114 + VS H++V QL+P E WHAG + N T Sbjct: 208 HRRFVHAGGGPEGVSFHFVVD--------DREAVQLLPVVENGWHAGDG---PSGPGNRT 256 Query: 115 SIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRK 174 S+ IEL A + L + + + E VV H + K Sbjct: 257 SVAIELCVHAGSDWARTQEHG----------ARLTAALCRAFGLPAERVVPHQRWSG--K 304 Query: 175 DDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTP-----VDTASLLEL---LARYG 226 P ++L QG G + D AGR D + E L +G Sbjct: 305 GCP------RRLLAQGFGRFVDRVAEQLRAAGRFFPQTGYTLRGDFLAFWEARGGLELFG 358 Query: 227 YDVKP 231 Y + Sbjct: 359 YPLSA 363 >UniRef50_C7Q684 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=5 Tax=Actinomycetales RepID=C7Q684_CATAD Length = 375 Score = 96.3 bits (238), Expect = 9e-19, Method: Composition-based stats. Identities = 50/243 (20%), Positives = 79/243 (32%), Gaps = 33/243 (13%) Query: 9 AAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQV 68 + L+LAG + + E + +AQA + ++ +H D + + Q Sbjct: 63 SPVLMLAGTTRKIIVHHTEFPNVTDYSRAQAVHLAQEIQNLH---MDKNG---WIDTGQ- 115 Query: 69 SSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRL--NDTSIGIELENRGWQ 126 H+ V G+ R A AG +GA + N IGIE E + Sbjct: 116 --HFTVSRGGYVLEGRHR-------SLEALTAGTKQVQGAHCIGENSQGIGIENEGTYYT 166 Query: 127 KSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLF--PWQ 184 ++ P Q Q+L L DI +Y I ++ H D D PG F + Sbjct: 167 ETP--------PPVQFQSLTKLCVDICRQYGIGAHDIFGHWDYNET--DCPGVAFYREFP 216 Query: 185 QLAQQG-IGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIM 243 L + G + + + LL GY V + Sbjct: 217 TLRRAVAHGIGQHTFPDRTWPDIYDSNAGPVVRVVQWLLLNQGYTVPTSGVFDAT--TVA 274 Query: 244 AFQ 246 A Q Sbjct: 275 AVQ 277 >UniRef50_B9YE42 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YE42_9FIRM Length = 244 Score = 96.3 bits (238), Expect = 9e-19, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 59/160 (36%), Gaps = 30/160 (18%) Query: 28 GYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQV--------SSHYLVPAVPP 79 Y + + I+ +VIH T ++ S+ A ++ + S HY V Sbjct: 87 DYIPEGHQNRPGIQREIRWIVIHETDNEAASADAWHHNEYLKTNETDINSWHYTVD---- 142 Query: 80 RYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEP 139 I+ +P++E+ WHAG N T IGIEL Sbjct: 143 ----DHAIYHSLPDEEVGWHAGDKM--TENGGNMTGIGIELCVNEGNDF----------E 186 Query: 140 AQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGP 179 ++ L +++ Y ++ E++ H D + KD P Sbjct: 187 KTMENAAALCAELMKAYDLRIEDIKQHHDFSG--KDCPHR 224 >UniRef50_UPI0001693C62 N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001693C62 Length = 257 Score = 96.3 bits (238), Expect = 9e-19, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 64/171 (37%), Gaps = 29/171 (16%) Query: 18 AGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSS------LATLTDKQVSSH 71 G + + ++ ++ + + LV H T + ++ T+T++ S+H Sbjct: 2 NGNQYSITQDYIRIRDNTRPGSKLRGPVFLVAHDTGNPGSTARNNRNYFNTMTERSASAH 61 Query: 72 YLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGAT----RLNDTSIGIELENRGWQK 127 + I +++P E AWH ND ++G+EL G Sbjct: 62 VFID--------DTEILEIIPLNEKAWHVRYDVPTDKRLYGCSANDAAVGVELCYGGHIH 113 Query: 128 SAGVKYFAPFEPAQIQALIPLAKDIIARYHI-KPENVVAHADIAPQRKDDP 177 FE A + + + ++ + +++V+H + P RK DP Sbjct: 114 ---------FEKA-YRRYVWYFAYLCRKFDLNPRKHIVSHKTLDPGRKVDP 154 >UniRef50_B5LLI8 Gp242 n=8 Tax=unclassified Myoviridae RepID=B5LLI8_9CAUD Length = 476 Score = 96.3 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 50/166 (30%), Gaps = 22/166 (13%) Query: 33 TRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQ----VSSHYLVPAVPPRYNGKPRIW 88 + + I +V H+T F + + S YL G Sbjct: 198 AYNRGHGDFGEIWGVVAHHT-GSFGETPKGIAQHPSLGLASQLYLGRNGEYTLCGVG--- 253 Query: 89 QLVPEQELAWHAGISAWRG--ATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALI 146 +AWHAG ++ G N +IGIE N G G + + Q A + Sbjct: 254 -------IAWHAGQGSYPGLPTNDANRLTIGIEAANDGGGSPPGKR--DAWSDVQYNAYV 304 Query: 147 PLAKDIIARYHIKPENVVAHADIAPQR--KDDPGPLFPWQQLAQQG 190 I+ + V+ H + A K DPG Sbjct: 305 RGVAAILRKLGRDSSRVIGHKEWAGTAQGKWDPGG-IDMNTFRADV 349 >UniRef50_A6NPI6 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NPI6_9BACE Length = 218 Score = 95.9 bits (237), Expect = 1e-18, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 61/168 (36%), Gaps = 34/168 (20%) Query: 19 GEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADD------FDSSLATLTDKQ---VS 69 VE++ ++ + + +V+HYT + S A L S Sbjct: 57 DAPEWVERQLLPINEYSRPGEKLTAVNGVVVHYTGNPGTTAQQNRSYFAGLAQSGETFAS 116 Query: 70 SHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSA 129 S++++ + I + VP E+A+ + N ++ IE+ + Sbjct: 117 SNFVIGL-------EGEILECVPLDEVAYASSQ--------RNYDTLSIEVCHPDDTGE- 160 Query: 130 GVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDP 177 F A AL+ L + ++ Y + + ++ H D+ K+ P Sbjct: 161 -------FTQASYDALVKLVQWLVDTYDLDRDQILRHYDVTG--KECP 199 >UniRef50_D1N8S7 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N8S7_9BACT Length = 306 Score = 95.9 bits (237), Expect = 1e-18, Method: Composition-based stats. Identities = 36/164 (21%), Positives = 60/164 (36%), Gaps = 25/164 (15%) Query: 31 LDTRRQAQAAYPRIKVLVIHYTADDFDSSLAT------LTDKQVSSHYLVPAVPPRYNGK 84 + R + + +K + IH TA+ F + + VS H+ V Sbjct: 135 YNRRYKLPGKFRAVKYVTIHNTAEPFSARQERDRVDFRRDGRSVSFHFAVDEC------- 187 Query: 85 PRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQA 144 QL+P WHAG G N SIG+E+ + +A +Y A+I Sbjct: 188 -EAVQLLPLDIHGWHAGDGRGPG----NTESIGVEICRSQCRGAAEWQYRRSEANAEI-- 240 Query: 145 LIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQ 188 LA ++ + + ++ H D RK P L + + Sbjct: 241 ---LAAALLRHFKLTAADLRMHRDW--MRKYCPHRLLEENRFEE 279 >UniRef50_C6IXL5 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IXL5_9BACL Length = 220 Score = 95.9 bits (237), Expect = 1e-18, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 66/230 (28%), Gaps = 53/230 (23%) Query: 24 VEKEGYQLDTRRQAQAAYPRIKV------LVIHYTADDFDSSL---ATLTDKQ----VSS 70 + K Y++D + R + IH T + ++ A LT+ S Sbjct: 1 MRKVNYRIDHIPKTTGNNRRPGYSMEATTITIHNTGNPSSTAANERAWLTNPSNERTASY 60 Query: 71 HYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAG 130 H ++ + +P E AWHAG + G N TSI +E+ G Sbjct: 61 HIVIDER--------EAIECIPLTENAWHAGDGS--GVKSGNRTSISVEICESGNF---- 106 Query: 131 VKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQG 190 + L ++ + + H D + K P +L G Sbjct: 107 --------DKTLDNAAELIAKLLRERGWGVDRLRRHFDWSG--KICP-------RLMYDG 149 Query: 191 IGAW-------PDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDM 233 G W + P D ++ L GY Sbjct: 150 -GTWAGWEAFKKKVAAKLAAKEEKPMLKPEDAEKIIAFLGA-GYKATESK 197 >UniRef50_C1I9T8 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Clostridium sp. 7_2_43FAA RepID=C1I9T8_9CLOT Length = 272 Score = 95.9 bits (237), Expect = 1e-18, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 55/214 (25%), Gaps = 37/214 (17%) Query: 32 DTRRQAQAAYPRIKVLVIHYTADDFDSS----LATLTDKQVSSHYLVPAVPPRYNGKPRI 87 D K + IH TA+D +S VS H + Sbjct: 11 DKYSIKCPYSMTPKGICIHNTANDASASNEISYMQSNTNSVSFHIGID--------DVEA 62 Query: 88 WQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIP 147 Q +P AWHAG + N I +E+ + F A+ +A Sbjct: 63 IQGIPFNRNAWHAGDGS---TGDGNRNYISVEICYSKSGGTR-------FINAEKRAAKE 112 Query: 148 LAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFP--WQQLAQQGIGA--WPDAQRVNFY 203 ++ +Y + H D + K P WQ+ + Y Sbjct: 113 -VAALLKQYGWGIAQIRKHQDFSG--KYCPHRTLDMGWQRFLNMIQAEIDNLNPPTNELY 169 Query: 204 LAGRAPHTPVDTASLLELLARY--------GYDV 229 + L GY V Sbjct: 170 RVRKTWEDAASQIGAFSNLQNAKDCADANPGYSV 203 >UniRef50_Q5L2J6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Geobacillus kaustophilus RepID=Q5L2J6_GEOKA Length = 226 Score = 95.9 bits (237), Expect = 1e-18, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 72/207 (34%), Gaps = 37/207 (17%) Query: 29 YQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLT---------DKQVSSHYLVPAVPP 79 +++ + +K LV+H+TA+ S+ T + S+H V Sbjct: 9 IRVNKYSRPGLKLKGVKKLVLHWTANPGASAANHFTYFDRTIIQAQRYASAHIFVDKN-- 66 Query: 80 RYNGKPRIWQLVPEQELAWHAGISAWRG----ATRLNDTSIGIELENRGWQKSAGVKYFA 135 ++P E+A+HA +RG N SIG+E+ V+ Sbjct: 67 ------EAINIIPLDEVAYHANDGTYRGVPELKPNANFLSIGVEMC---------VEKDG 111 Query: 136 PFEPAQIQALIPLAKDIIARYHI-KPENVVAHADIAPQRKDDPGPLFP----WQQLAQQG 190 F P I + ++ + + +++V H DI K+ P P ++ Q+ Sbjct: 112 TFHPDTISRTEDVFVELCKTFKLDPIKDIVRHYDI--THKNCPAPWVKDSKAFEDFKQRV 169 Query: 191 IGAWPDAQRVNFYLAGRAPHTPVDTAS 217 + Y + T A+ Sbjct: 170 KAKMSPPKANVSYYTVKPGDTLSGIAA 196 >UniRef50_UPI0001C1705F AmpD n=2 Tax=Nostocaceae RepID=UPI0001C1705F Length = 285 Score = 95.5 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 64/195 (32%), Gaps = 37/195 (18%) Query: 18 AGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK------QVSSH 71 A + G + + A + ++V+H T S++ + Q S H Sbjct: 90 AAAQVHPSNYGERFSRDTKGMAVSNQP-IIVLHETTYSARSAINYFQNHNVDEDIQASYH 148 Query: 72 YLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATR--------------LNDTSIG 117 ++ + LVP + A+ AG S ++ +N+ + Sbjct: 149 AII-------ARDGTVIYLVPPDKRAFGAGNSVFKNTDGTIETVQTNPKLAPSVNNFAYH 201 Query: 118 IELENRGWQ-KSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHA--DIAPQRK 174 + LE ++ + + Q +L L + + + H D+A K Sbjct: 202 VSLETPPDGWGKRDIREHSGYTQEQYNSLAWLIA----QSQVPDNRITTHRAVDVANG-K 256 Query: 175 DDPGPLFPWQQLAQQ 189 DP F + + ++ Sbjct: 257 VDP-LSFDFDRFFKK 270 >UniRef50_C7MM46 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MM46_CRYCD Length = 339 Score = 95.1 bits (235), Expect = 2e-18, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 64/166 (38%), Gaps = 31/166 (18%) Query: 39 AAYPRIKVLVIHYTADDFDS----SLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQ 94 R + + +HYT++ + S A + S HY++ +QL+ + Sbjct: 16 PGGNRCEYIAVHYTSNSAPARSEASYAQNSQHSSSYHYVLDGYEC--------YQLLNDT 67 Query: 95 ELAWHAGISAWRGATRL--NDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDI 152 + AW G W G T+L N +I IE+ N G F A+ L L + Sbjct: 68 DTAWAVG--TWPGYTQLISNRQAISIEVCNAGGS----------FSDAERDQLRELVALL 115 Query: 153 IARYHIKPENVVAHADIAPQRKDDP-----GPLFPWQQLAQQGIGA 193 + R+ I ++VV H D RK+ P W +L G Sbjct: 116 MERHSIDADHVVRHWDCHTGRKECPEYYAGAKSNEWSELHDYITGG 161 >UniRef50_B6BVD5 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=beta proteobacterium KB13 RepID=B6BVD5_9PROT Length = 134 Score = 95.1 bits (235), Expect = 2e-18, Method: Composition-based stats. Identities = 31/100 (31%), Positives = 42/100 (42%), Gaps = 16/100 (16%) Query: 55 DFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDT 114 D + D +VS+H+L+ + Q V + AWHAG S+++G ND Sbjct: 22 DAHPYFKEIKDLKVSAHFLIK-------RNGELIQFVSCNDRAWHAGESSYQGKENCNDF 74 Query: 115 SIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIA 154 SIGIELE PFE Q LI L + Sbjct: 75 SIGIELEGDDET---------PFEDDQYIKLIELLGCLKK 105 >UniRef50_A0YR44 AmpD n=3 Tax=Oscillatoriales RepID=A0YR44_9CYAN Length = 301 Score = 94.3 bits (233), Expect = 4e-18, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 65/192 (33%), Gaps = 31/192 (16%) Query: 36 QAQAAYPRIKVLVIHYTADDFDSSLATLT------DKQVSSHYLVPAVPPRYNGKPRIWQ 89 + ++V+H TA S++ D Q S H L+ + Sbjct: 125 SGKPVTNTP-IVVLHETAATAQSTINFFQTYHTDEDDQASYHTLITL-------NGDVVY 176 Query: 90 LVPEQELAWHAGISAWRGA---------TRLNDTSIGIELENRGWQKSAGVKYFAPFEPA 140 +VP A+ AG S ++G +N+ + + LE G + + A Sbjct: 177 IVPPDLRAYGAGNSVFQGEAVQTDAKFPPSVNNFAYHVSLETPPDGLRNGASHSG-YTTA 235 Query: 141 QIQALIPLAKDIIARYHIKPENVVAHADIAP-QRKDDPGPLFPWQQLAQQGIGAWPDAQR 199 Q Q+L L + I + H + + DP F QQL Q + +P + Sbjct: 236 QYQSLAWLVA----QTGIPENRITTHQAVDRSGERSDP-RRFD-QQLFLQLLRRYPQTRE 289 Query: 200 VNFYLAGRAPHT 211 + + + Sbjct: 290 IVIGCQAPSINQ 301 >UniRef50_B8HSE7 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=Cyanobacteria RepID=B8HSE7_CYAP4 Length = 305 Score = 94.3 bits (233), Expect = 4e-18, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 62/176 (35%), Gaps = 33/176 (18%) Query: 47 LVIHYTADDFDSSLATLT------DKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHA 100 +V+H T D +++T D QVS H ++ + LVP + A+ A Sbjct: 136 VVLHETVGDAHGAISTFQTPHYDDDNQVSYHAVIS-------RNGTVIYLVPANKRAYGA 188 Query: 101 GISAWRG-------------ATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIP 147 G S + G A+ +N+ + I LE + + Q Q+L Sbjct: 189 GNSEFIGINGVEAVQTNPSLASSVNNFAYHISLETPVDGLLDDHPEHSGYTQKQYQSLAW 248 Query: 148 LAKDIIARYHIKPENVVAHADIAP-QRKDDPGPLFPWQQLAQQGIGAWPDAQRVNF 202 L R + + HA I + DP F + +L + +P + Sbjct: 249 LIA----RTGVATSRITTHAAIDREGARQDP-RSFSFPKLLSY-LNQYPRPTEIPP 298 >UniRef50_Q30PL8 Negative regulator of AmpC, AmpD n=4 Tax=Bacteria RepID=Q30PL8_SULDN Length = 219 Score = 94.3 bits (233), Expect = 4e-18, Method: Composition-based stats. Identities = 47/199 (23%), Positives = 72/199 (36%), Gaps = 55/199 (27%) Query: 25 EKEGYQLDTRRQAQAAYPRIKVLVIHYTA-DDFDSSLATLTDK---------------QV 68 KE + + K++VIH+TA DDF++SL+ D+ V Sbjct: 35 TKEYIKYHYNLDVKDIKITPKIIVIHHTAIDDFNASLSCFKDQTLPNARADIHRGGALNV 94 Query: 69 SSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKS 128 S+H++V I QL+P +A H LN SIGIE Sbjct: 95 SAHFIVD-------RDGTIHQLMPLDIMARHV--------IGLNYNSIGIENVG------ 133 Query: 129 AGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIA---------------PQR 173 G P Q++A I L ++ R+ + + V+ H + Sbjct: 134 -GQNSKDNLTPEQLRANIELVAELKRRFP-EIDYVIGHYEYRCFEKDELWLEVDKKYRTY 191 Query: 174 KDDPGPLFPWQQLAQQGIG 192 KDDP F + +Q G Sbjct: 192 KDDPSSRF-MSAIREQIEG 209 >UniRef50_B0C6S0 N-acetyl-anhydromuramyl-L-alanine amidase, putative n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C6S0_ACAM1 Length = 298 Score = 94.3 bits (233), Expect = 4e-18, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 55/160 (34%), Gaps = 33/160 (20%) Query: 47 LVIHYTADDFDSSLATLTDK------QVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHA 100 +V+H T S++ Q S H L+ I LVP + A+ A Sbjct: 141 IVLHETVGSGMSAIRHFQTPHPRDEDQASYHALIFL-------DGTIVYLVPPEHRAFGA 193 Query: 101 GISAWRGATR-------------LNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIP 147 G S + GA +N+ + I LE G + + +Q Q+L Sbjct: 194 GNSVFIGANGPEAVKTNPDLPASVNNFAYHIALETPPDGNHNGPSHGG-YSESQYQSLAW 252 Query: 148 LAKDIIARYHIKPENVVAHADIAP-QRKDDPGPLFPWQQL 186 L R + + + HA + + DP F + + Sbjct: 253 LIA----RTGVPSQRITTHAKVDRSGERSDP-RSFDFSKF 287 >UniRef50_D0LH65 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LH65_HALO1 Length = 233 Score = 93.9 bits (232), Expect = 6e-18, Method: Composition-based stats. Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 32/163 (19%) Query: 44 IKVLVIHYTADDFDSSLATL---------TDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQ 94 ++ HYTA D ++ A ++ S H + + IWQ+V Sbjct: 85 PLAIMAHYTATDPGTARAMAERRVRERTSQNRPASWHITIDH-------EGTIWQMVAAS 137 Query: 95 ELAWHAGISAWRGATR----LNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAK 150 AWH G + +N +GIELE G + F AQI+A + + Sbjct: 138 ACAWHCARGKVDGPSGKKLSINQAVVGIELEGHGEE----------FTAAQIEAACRVWR 187 Query: 151 DIIARYHIKPE-NVVAHADIAPQRKDDPGPLFPWQQLAQQGIG 192 ++ Y I ++ H+ P R+ DPGP++ +Q AQ+ + Sbjct: 188 ALVRTYAIPDHLAMLEHSRYDPGRRVDPGPVW-MKQHAQRVLA 229 >UniRef50_Q8DLW7 Tlr0359 protein n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DLW7_THEEB Length = 287 Score = 93.2 bits (230), Expect = 8e-18, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 65/195 (33%), Gaps = 36/195 (18%) Query: 17 CAGEKGIVEKE------GYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDK---- 66 CA G + T + Q ++V+H T D S+L Sbjct: 93 CATTPPWYSVPIDPTNFGDRYRTDLRGQLLDHEP-LIVLHETVDSAASALNFFQTPHLRD 151 Query: 67 --QVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRG---------ATRLNDTS 115 Q S H L+ + LVP + A+ AG SA+ A +N+ + Sbjct: 152 EEQASYHELITL-------NGWLLHLVPWSKRAYGAGNSAFGKEAAQTNPRLAPSVNNFA 204 Query: 116 IGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAP-QRK 174 + LE + G + + AQ + L L + I + V HA + + Sbjct: 205 LHFSLETPPQGRHNGPSHTG-YTDAQYRTLAWLVA----QTGIDRQRVTTHAAVDRSGER 259 Query: 175 DDPGPLFPWQQLAQQ 189 DP F W + + Sbjct: 260 MDP-RSFDWVKFNRY 273 >UniRef50_A8E261 Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Enterococcus phage phiEF24C RepID=A8E261_BPPHE Length = 289 Score = 93.2 bits (230), Expect = 9e-18, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 52/163 (31%), Gaps = 25/163 (15%) Query: 27 EGYQLDTRRQAQAAYPRIKVLVIHYTADDFDS-SLATL---TDKQVSSHYLVPAVPPRYN 82 + I +++H+ A ++ T S+HY Sbjct: 11 TSVNPNPMNAGSRNGIPIDTIILHHNATTNKDVAMNTWLLGGGAGTSAHY--------EC 62 Query: 83 GKPRIWQLVPEQELAWHAGISA---WRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEP 139 I V EQ A+HAG + N SIGIE N + V P Sbjct: 63 TPTEIIGCVGEQYSAFHAGGTGGIDVPKIANPNQRSIGIENVNSSGAPNWSVD------P 116 Query: 140 AQIQALIPLAKDIIARYHIK--PENVVAHADIAPQRKDDPGPL 180 I L DI RY I ++V+ H ++ PG + Sbjct: 117 RTITNCARLVADICTRYGIPCDRQHVLGHNEVTAT--ACPGGM 157 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.137 0.426 Lambda K H 0.267 0.0424 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,738,523,739 Number of Sequences: 3077464 Number of extensions: 72025608 Number of successful extensions: 208789 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 439 Number of HSP's successfully gapped in prelim test: 858 Number of HSP's that attempted gapping in prelim test: 205386 Number of HSP's gapped (non-prelim): 1479 length of query: 276 length of database: 1,040,396,356 effective HSP length: 127 effective length of query: 149 effective length of database: 649,558,428 effective search space: 96784205772 effective search space used: 96784205772 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 92 (40.0 bits)