27/01/2012 09:40:06 : INFO  : Run start: Fri Jan 27 09:40:06 GMT 2012
27/01/2012 09:40:08 : INFO  : Initialised job
27/01/2012 09:40:08 : INFO  : Renaming log file 'phyre2_20120127_094006.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/4ef46c3512212bf9/phyre_20120127_094006.log'
27/01/2012 09:40:09 : INFO  : Initialised job:
Sequence
>batch____
MTLLGTALRPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYADAPAMHVAHRSHVIN
MLDGDALRRVVELEKPHYIVPEIEAIATDMLIQLEEEGLNVVPCARATKLTMNREGIRRL
AAEELQLPTSTYRFADSESLFREAVADIGYPCIVKPVMSSSGKGQTFIRSAEQLAQAWKY
AQQGGRAGAGRVIVEGVVKFDFEITLLTVSAVDGVHFCAPVGHRQEDGDYRESWQPQQMS
PLALERAQEIARKVVLALGGYGLFGVELFVCGDEVIFSEVSPRPHDTGMVTLISQDLSEF
ALHVRAFLGLPVGGIRQYGPAASAVILPQLTSQNVTFDNVQNAVGADLQIRLFGKPEIDG
SRRLGVALATAESVVDAIERAKHAAGQVKVQG

27/01/2012 09:40:09 : INFO  : Checked sequence
27/01/2012 09:40:10 : INFO  : Finding homologues with PSI-BLAST
27/01/2012 09:40:10 : INFO  : PSI-BLAST 3 iterations
27/01/2012 09:42:32 : INFO  : PSI-BLAST 5 iterations
27/01/2012 09:45:46 : INFO  : Finished PSI-BLAST
27/01/2012 09:45:47 : INFO  : Running Buildali to generate a3m file
27/01/2012 10:04:47 : INFO  : Converting to HMM
27/01/2012 10:04:53 : INFO  : Calibrating HMM
27/01/2012 10:05:12 : INFO  : Searching HMM database
27/01/2012 10:14:37 : INFO  : Finished buildali
27/01/2012 10:14:38 : INFO  : Predicting secondary structure
27/01/2012 10:14:42 : INFO  : Predicted secondary structure (PSI-Pred)
27/01/2012 10:14:43 : INFO  : Predicting Disordered regions
27/01/2012 10:14:45 : INFO  : Predicted Disorder (Disopred)
27/01/2012 10:14:46 : INFO  : Running memsat_svm check
27/01/2012 10:15:56 : INFO  : Globular protein
27/01/2012 10:15:57 : INFO  : Predicted Transmembrane (memsat_svm) ID '4ef46c3512212bf9'
27/01/2012 10:15:57 : INFO  : Initialising fold library search
27/01/2012 10:15:59 : INFO  : Initialised search input
27/01/2012 10:16:00 : INFO  : Building Ensemble models
27/01/2012 10:16:02 : INFO  : Building hh.c1kjjA_.model.1.pdb
27/01/2012 10:16:09 : INFO  : Building c1kjjA_.1.pdb
27/01/2012 10:16:16 : INFO  : Building c2dwcB_.2.pdb
27/01/2012 10:16:23 : INFO  : Building c3uvzB_.3.pdb
27/01/2012 10:16:31 : INFO  : Building c3q2oB_.4.pdb
27/01/2012 10:16:39 : INFO  : Building c3orqA_.5.pdb
27/01/2012 10:16:46 : INFO  : Building c3bg5C_.6.pdb
27/01/2012 10:16:54 : INFO  : Building c3k5iB_.7.pdb
27/01/2012 10:17:00 : INFO  : Building c3g8cB_.8.pdb
27/01/2012 10:17:08 : INFO  : Building c3etjB_.9.pdb
27/01/2012 10:17:15 : INFO  : Building c3ouzA_.10.pdb
27/01/2012 10:17:22 : INFO  : Building c1ulzA_.11.pdb
27/01/2012 10:17:30 : INFO  : Building c2dzdB_.12.pdb
27/01/2012 10:17:38 : INFO  : Building c2vpqA_.13.pdb
27/01/2012 10:17:45 : INFO  : Building c2yyaB_.14.pdb
27/01/2012 10:17:51 : INFO  : Building c1m6vE_.15.pdb
27/01/2012 10:18:00 : INFO  : Building c2hjwA_.16.pdb
27/01/2012 10:18:08 : INFO  : Building c2gpwC_.17.pdb
27/01/2012 10:18:16 : INFO  : Building c1w96B_.18.pdb
27/01/2012 10:18:22 : INFO  : Building c2xd4A_.19.pdb
27/01/2012 10:18:28 : INFO  : Building c3lp8A_.20.pdb
27/01/2012 10:18:45 : INFO  : Finished HH model building
27/01/2012 10:18:45 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
27/01/2012 10:19:26 : INFO  : html domain output complete ID '4ef46c3512212bf9'
27/01/2012 13:22:30 : INFO  : Run end  : Fri Jan 27 13:22:30 GMT 2012
