178 c1vmaA_ Probab=96.37   E-value=0.0091  Score=37.13  Aligned_columns=130  Identities=15%

Q ss_pred             CCEEEECCCCEEEEECCCCCCCEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC
Q ss_conf             23257879978999858998730111002787577632111334663335543322102564301124444211111222
Q batch____        21 GLSFTLNAGEWVQITGSNGAGKTTLLRLLTGLSRPDAGEVLWQGQPLHQVRDSYHQNLLWIGHQPGIKTRLTALENLHFY  100 (207)
Q Consensus        21 ~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~e~l~~~  100 (207)
                      .+.+.-.+..+++++||+|+||||.+.-|+..+.-..-++.+-.-|....                              
T Consensus        84 ~~~~~~~~~~vi~~~Gp~G~GKTTt~aklA~~~~~~g~~v~li~~D~~R~------------------------------  133 (294)
T c1vmaA_          84 KLNVPPEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRA------------------------------  133 (294)
T ss_dssp             CCCCCSSSCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTTCH------------------------------
T ss_pred             CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCH------------------------------
T ss_conf             00235789669999806887602489999999996799489997587686------------------------------


Q ss_pred             CCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH----
Q ss_conf             2331169999987640751013320122233203679988876420440363087758898999999999999996----
Q batch____       101 HRDGDTAQCLEALAQAGLAGFEDIPVNQLSAGQQRRVALARLWLTRATLWILDEPFTAIDVNGVDRLTQRMAQHTE----  176 (207)
Q Consensus       101 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~g~~~rl~la~al~~~p~ililDEP~~gLD~~~~~~i~~~l~~~~~----  176 (207)
                         ...++...+.+.+++.-+......++..-.++-+..++  ..+.+++++|-|-.+-.......=...+.+...    
T Consensus       134 ---gA~eQL~~~a~~~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~IlIDTaGr~~~d~~~~~el~~~~~~~~~~~~  208 (294)
T c1vmaA_         134 ---AAIEQLKIWGERVGATVISHSEGADPAAVAFDAVAHAL--ARNKDVVIIDTAGRLHTKKNLMEELRKVHRVVKKKIP  208 (294)
T ss_dssp             ---HHHHHHHHHHHHHTCEEECCSTTCCHHHHHHHHHHHHH--HTTCSEEEEEECCCCSCHHHHHHHHHHHHHHGGGTCT
T ss_pred             ---HHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHH--HCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf             ---47999999997619828974883698999999999999--7799899981888987857999999999999630356


Q ss_pred             --CCCEEEEEE
Q ss_conf             --698699996
Q batch____       177 --QGGIVILTT  185 (207)
Q Consensus       177 --~~~tiii~s  185 (207)
                        ...++++++
T Consensus       209 ~~p~~~~LVl~  219 (294)
T c1vmaA_         209 DAPHETLLVID  219 (294)
T ss_dssp             TCCSEEEEEEE
T ss_pred             CCCCEEEEEEE
T ss_conf             68853999811