12 c2irmA_ Probab=99.96   E-value=8.6e-28  Score=181.82  Aligned_columns=241  Identities=11%

Q ss_pred             EEEEECCCCHH---HHCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
Q ss_conf             99980137314---527986764599884267776857999997388753100057999999999999842345556888
Q batch____         5 LVYASTVGTSH---ISADLPCQDACQMQIAWLNDQQPLLSVFVADGAGSVSQGGEGAMLAVNEAMAYMSQKVQGGELGLN   81 (253)
Q Consensus         5 ~~~~S~~G~sh---~~~~~p~qDa~~~~~~~~~~~~~~~~~aVaDG~G~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~   81 (253)
                      +-.++-.|++.   ...+.||||.+....    .+.+..+++|||||||+..+.++++.+...+  +.............
T Consensus        14 ig~~~~~~~~~d~~~~~~~~~eD~~~~~~----~~~~~~lfGVfDGHgG~~aa~~~~~~L~~~l--~~~~~~~~~~~~~~   87 (339)
T c2irmA_          14 VGEAINQIYKDDGRRCEGYESRDKKCLCI----SDNNTSLYAILSGHNGVTVAENALQEMAAEL--LLGQLNVCNTDEAV   87 (339)
T ss_dssp             EEEECCEEECSSSCEEECSSCCEEEEEEE----CSSSEEEEEEEEEESCSHHHHHHHHHHHHHS--SSSTTTTCCSHHHH
T ss_pred             CEECCCCCCCCCCCCCCCCCCCCEEEEEE----CCCCEEEEEEECCCCHHHHHHHHHHHHHHHH--HHHHHCCCCCHHHH
T ss_conf             40024311374778865566755699996----0798599999539888999999999889999--98751134572579


Q ss_pred             HHHHHHHHHHHHHHHHHH-------------------HHHCCCCCCCEEEEEEEEEEECCEEEEEEEECCEEEEEECC--
Q ss_conf             999999999998898886-------------------76236655652589999796588699999908919999899--
Q batch____        82 DVLATNMVLTIRQRLFAE-------------------AEAKELAVRDFACTFLGLISSPDGTLIMQIGDGGVVVDLGH--  140 (253)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~tTl~~~~~~~~~~~~~~vGDs~~~~~r~~--  140 (253)
                      ...+++.+......+...                   ..........+|||++++++.+..++++|+||||+++.+.+  
T Consensus        88 ~~~l~~af~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GsTavv~li~~~~l~vANvGDSRavl~~~~~~  167 (339)
T c2irmA_          88 KELIRQSFMSVEKGYFDSINPHVATKTAIQLHLSVLQKLDSLNNALSVGSSAVLALIHRSHLYLGNIGNCRALLCKTDEH  167 (339)
T ss_dssp             HHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHTTCCCCTHHHHHTTTTCEEEEEEEEEESSEEEEEEESSCEEEEEECCTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCEEEECCCCCCCEEEEECCCC
T ss_conf             99999999999999998745666666654310001111100124688980599999978978983268631799820788


Q ss_pred             ---EEEEEEECCCCCCCCC---------------------EEEECC--------------------CCCCCCEE-EEEEC
Q ss_conf             ---6999202578874783---------------------045043--------------------11378618-99963
Q batch____       141 ---GLQLPLTPMAGEYANM---------------------THFITD--------------------EDAVSRLE-TFTST  175 (253)
Q Consensus       141 ---~~~~lt~dh~~~~~n~---------------------t~~l~~--------------------~~~~~~~~-~~~~~  175 (253)
                         +..++|.||+|....|                     ++.+++                    -.+.|... .....
T Consensus       168 ~~~~~~~LT~DH~p~~~~E~~RI~~~g~~v~~~~~~~l~~sRa~GD~~~k~~~~~~~~l~~~~~~~v~a~PdI~~~~~l~  247 (339)
T c2irmA_         168 DTLTVTQLSVDHNLLNAEEAARLFRLGLMAQNFEGVPLYSTRCIGNYLGKAGYKDCNFLSSATAEPVIFEPEIVGGIQIT  247 (339)
T ss_dssp             CSCEEEECSCCCBTTSHHHHHHHHTTTCCGGGGTTCTTCBSBCEECHHHHTTGGGSSSSTTCSSCSSBCCCEEEEEEECC
T ss_pred             CCEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCEECCHHHCCCCCCCCCCCCCCCCCEECCCCEEEEEEEC
T ss_conf             85589982889989898999999860888920116864221113370101521232112456678631158769999808


Q ss_pred             CCCCEEEEEECCCCCCCCCHHHCCCCCHHHHHHHHHHHH-CCCCCHHHHHHHHHHHHHH-------------HHHHCCCC
Q ss_conf             788468998324111135500000110466799999973-1013778899999998437-------------77524899
Q batch____       176 GRAHKVAAFTDGIQRLALNMLDNSPHVPFFTPFFNGLAA-ATQEQLDLLPELLKQFLSS-------------PAVNERTD  241 (253)
Q Consensus       176 ~~~~~iil~TDGi~d~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~l~~~L~~-------------~~~~~~~~  241 (253)
                      ....+++|+||||||.+.+++.......-.+........ ..........+.+.+.+.+             .+.+++++
T Consensus       248 ~~d~flVLaSDGlwd~l~~~~~~~~~~~n~~~~~~v~~~l~~~~~~~~~a~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~  327 (339)
T c2irmA_         248 PACRFLVLMSSGLCRALHEIFPGDASTGNRELVRMISEEFQNQSTLGGVAQSVVHRIVQAHHDTYMQLVEEHRSVTFNSR  327 (339)
T ss_dssp             TTEEEEEEECHHHHHHHHHHSCSSSSHHHHHHHHHHHHHTTTCCSHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCCCEE
T ss_pred             CCCEEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             98509999537310137888998764132589999999963169989999999999998646556520023346567886


Q ss_pred             CCCEEEEEEE
Q ss_conf             8709999995
Q batch____       242 DDKTLALALW  251 (253)
Q Consensus       242 DD~Tivi~~~  251 (253)
                      ||+||+|.+|
T Consensus       328 DdiTv~V~~f  337 (339)
T c2irmA_         328 DDVTLLIRNF  337 (339)
T ss_dssp             CCEEEEEEES
T ss_pred             CCEEEEEEEC
T ss_conf             7528999961