Phyre 2 alignment of P41039 with c3a44D_

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Job Description | P41039
Confidence | 5.59% | Date | Thu Jan 5 12:01:20 GMT 2012
Rank | 80 | Aligned Residues | 27
% Identity | 22% | Template | c3a44D_
PDB info | PDB header:metal binding protein | Chain: D: PDB Molecule:hydrogenase nickel incorporation protein hypa; | PDBTitle: crystal structure of hypa in the dimeric form
Resolution | 3.31 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | 60 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | D | E | C | E | E | C | G | A | P | I | P | Q | A | R | R | . | . | . | . | . | . | . | . | E | A | I | P | G | V | R | L | C | I | H | C
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | F | K | C | R | N | C | N | Y | E | W | K | L | K | E | V | K | D | K | F | D | E | R | I | E | V | V | H | A | F | L | A | C | P | K | C
Template Known Secondary structure |  |  |  |  | T | T | T |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  | T | T | G | G | G |  | S |  | S | S | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 71 | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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