Phyre 2 alignment of P39834 with c3qbtH_

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Job Description | P39834
Confidence | 1.69% | Date | Thu Jan 5 12:01:00 GMT 2012
Rank | 56 | Aligned Residues | 19
% Identity | 5% | Template | c3qbtH_
PDB info | PDB header:protein transport/hydrolase | Chain: H: PDB Molecule:inositol polyphosphate 5-phosphatase ocrl-1; | PDBTitle: crystal structure of ocrl1 540-678 in complex with rab8a:gppnhp
Resolution | 2.00 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 39 | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | A | P | C | S | I | K | P | G | D | E | D | L | T | V | N | L | G | E | V | A | D | T | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | P | S | L | E | L | S | . | . | . | . | R | R | E | F | V | F | E | N | V | K | F | R | Q
Template Known Secondary structure |  |  |  |  |  |  | S | . | . | . | . |  |  |  |  |  |  |  |  |  | B | B | T | B
Template Predicted Secondary structure |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 563 | . | . | . | . | . |  |  |  |  | . | 570 | . | . | . | . | . | . | . | . | . | 580 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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