47 d1in4a2 Probab=98.54   E-value=4e-07  Score=64.48  Aligned_columns=116  Identities=19%

Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEE
Q ss_conf             99999999999999731366310013455566640111234556887249998889885899999998646766752510
Q batch____        25 QKEAVSRLEIIYQELINSTPPAPRTSGLMARVGKLWGKREDTKHTPVRGLYMWGGVGRGKTWLMDLFYQSLPGERKQRLH  104 (375)
Q Consensus        25 Q~~a~~~L~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pkGlyl~G~vG~GKT~Lmd~f~~~~~~~~k~rvh  104 (375)
                      |..+++.|..+.....                         ....+|.+++||||+|+|||+++.++++.+..+...   
T Consensus        14 ~~~~~~~l~~~i~~~~-------------------------~~~~~~~~iLl~GppG~GKT~la~~ia~~l~~~~~~---   65 (223)
T d1in4a2          14 QENVKKKLSLALEAAK-------------------------MRGEVLDHVLLAGPPGLGKTTLAHIIASELQTNIHV---   65 (223)
T ss_dssp             CHHHHHHHHHHHHHHH-------------------------HHTCCCCCEEEESSTTSSHHHHHHHHHHHHTCCEEE---
T ss_pred             CHHHHHHHHHHHHHHH-------------------------HCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEE---
T ss_conf             0999999999999987-------------------------368757738997589978647999999984898799---


Q ss_pred             HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHC--CCEEEEECCCCHH
Q ss_conf             78999999999997516655289999998524988999625425802489999999999977--9889997489936
Q batch____       105 FHRFMLRVHEELTALQGQTDPLEIIADRFKAETDVLCFDEFFVSDITDAMLLGGLMKALFAR--GITLVATSNIPPD  179 (375)
Q Consensus       105 Fh~Fm~~~h~~l~~~~~~~~~~~~~a~~~~~~~~lLc~DEf~v~Diadamil~~Ll~~l~~~--gv~iv~TSN~~P~  179 (375)
                                 +......................++++||++.........+...++.....  ++.+++++|.++.
T Consensus        66 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~  131 (223)
T d1in4a2          66 -----------TSGPVLVKQGDMAAILTSLERGDVLFIDEIHRLNKAVEELLYSAIEDFQIDIQPFTLVGATTRSGL  131 (223)
T ss_dssp             -----------EETTTCCSHHHHHHHHHHCCTTCEEEEETGGGCCHHHHHHHHHHHHTSCCCCCCCEEEEEESCGGG
T ss_pred             -----------EEECCEEEECCCHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
T ss_conf             -----------841000110000123555303550110000024888999999998401002278069996068532