BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (565 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0AA94 Inner membrane protein ypdA n=114 Tax=Bacteria R... 1154 0.0 UniRef50_C5VR12 Sensor protein LytS n=1 Tax=Clostridium botulinu... 476 e-133 UniRef50_A0PY88 Two-component sensor kinase n=2 Tax=Clostridium ... 438 e-121 UniRef50_Q7P590 Autolysin sensor kinase n=10 Tax=Fusobacterium R... 397 e-109 UniRef50_C3WH60 Autolysin sensor kinase n=4 Tax=Fusobacterium Re... 386 e-106 UniRef50_A8MGZ4 Signal transduction histidine kinase, LytS n=1 T... 360 7e-98 UniRef50_Q39S58 Histidine kinase internal region n=4 Tax=Bacteri... 347 7e-94 UniRef50_A1HTW6 Signal transduction histidine kinase, LytS n=2 T... 336 1e-90 UniRef50_Q5YL06 Putative sensor protein n=1 Tax=Aeromonas hydrop... 335 4e-90 UniRef50_Q5WAM1 Two-component sensor histidine kinase n=1 Tax=Ba... 327 6e-88 UniRef50_Q3AA02 Sensor histidine kinase n=1 Tax=Carboxydothermus... 323 1e-86 UniRef50_A8VV76 Signal transduction histidine kinase, LytS n=3 T... 320 1e-85 UniRef50_Q2RH26 Histidine kinase internal region n=3 Tax=Bacteri... 316 1e-84 UniRef50_A6TN09 Signal transduction histidine kinase, LytS n=1 T... 310 1e-82 UniRef50_C9RCQ9 Signal transduction histidine kinase, LytS n=4 T... 308 4e-82 UniRef50_UPI0001C42EFA two-component sensor histidine kinase n=1... 305 2e-81 UniRef50_C0ZI45 Two-component sensor histidine kinase n=1 Tax=Br... 304 7e-81 UniRef50_A1HSX0 Signal transduction histidine kinase, LytS n=1 T... 303 1e-80 UniRef50_B8CWX8 Signal transduction histidine kinase, LytS n=1 T... 303 1e-80 UniRef50_Q814J0 Sensor protein lytS n=83 Tax=Bacillaceae RepID=L... 296 1e-78 UniRef50_A1VG05 Signal transduction histidine kinase, LytS n=4 T... 296 2e-78 UniRef50_C5ETQ5 Signal transduction histidine kinase n=5 Tax=Clo... 291 5e-77 UniRef50_C0Z808 Two-component sensor histidine kinase n=1 Tax=Br... 281 3e-74 UniRef50_Q4A009 Sensor protein lytS n=84 Tax=Bacilli RepID=LYTS_... 281 4e-74 UniRef50_C5TXS9 Signal transduction histidine kinase, LytS n=2 T... 277 6e-73 UniRef50_A5VJZ2 Signal transduction histidine kinase, LytS n=13 ... 274 7e-72 UniRef50_A4J8Q8 Signal transduction histidine kinase, LytS n=1 T... 270 1e-70 UniRef50_Q5HLG3 Sensor protein lytS n=5 Tax=Staphylococcus epide... 265 5e-69 UniRef50_Q8EQQ2 Sensor protein lytS n=1 Tax=Oceanobacillus iheye... 262 3e-68 UniRef50_B1IFE5 Sensor histidine kinase n=13 Tax=Clostridium Rep... 262 3e-68 UniRef50_B8DLB4 Signal transduction histidine kinase, LytS n=2 T... 260 1e-67 UniRef50_C4XJP3 Sensor protein LytS n=1 Tax=Desulfovibrio magnet... 256 2e-66 UniRef50_A1HLU7 Signal transduction histidine kinase, LytS n=1 T... 254 6e-66 UniRef50_Q8E7H4 Sensor protein lytS n=10 Tax=Streptococcus RepID... 248 3e-64 UniRef50_B1YHT0 Signal transduction histidine kinase, LytS n=1 T... 248 3e-64 UniRef50_Q3DHF4 Sensor histidine kinase n=10 Tax=Streptococcus a... 247 1e-63 UniRef50_C0ZBJ5 Two-component sensor histidine kinase n=2 Tax=Ba... 241 5e-62 UniRef50_Q182U1 Two-component sensor histidine kinase n=6 Tax=ce... 229 2e-58 UniRef50_Q3AEC2 Sensor histidine kinase n=2 Tax=Clostridia RepID... 228 5e-58 UniRef50_B0G7P0 Putative uncharacterized protein n=2 Tax=Clostri... 225 4e-57 UniRef50_C5CI42 Signal transduction histidine kinase, LytS n=1 T... 224 1e-56 UniRef50_C9R972 Signal transduction histidine kinase, LytS n=1 T... 221 8e-56 UniRef50_B4UL02 Signal transduction histidine kinase, LytS n=9 T... 220 1e-55 UniRef50_B0TBI2 Sensor protein lyts n=1 Tax=Heliobacterium modes... 219 2e-55 UniRef50_Q1QCQ6 Histidine kinase internal region n=1 Tax=Psychro... 218 5e-55 UniRef50_B7IG85 Regulator of cell autolysis n=1 Tax=Thermosipho ... 218 7e-55 UniRef50_A6LJ91 Signal transduction histidine kinase, LytS n=1 T... 214 8e-54 UniRef50_B8G277 Signal transduction histidine kinase, LytS n=2 T... 209 3e-52 UniRef50_C8VX85 Signal transduction histidine kinase, LytS n=1 T... 208 6e-52 UniRef50_Q67QS2 Two-component sensor histidine kinase n=1 Tax=Sy... 206 2e-51 UniRef50_A6F874 Putative uncharacterized protein n=2 Tax=Gammapr... 204 1e-50 UniRef50_P0AD15 Inner membrane protein yehU n=287 Tax=root RepID... 202 3e-50 UniRef50_Q2RGH9 ATP-binding region, ATPase-like n=2 Tax=Clostrid... 197 8e-49 UniRef50_D0WHA5 Regulatory protein LytS n=2 Tax=Coriobacteriacea... 185 5e-45 UniRef50_C9LQU0 Sensor protein LytS n=1 Tax=Dialister invisus DS... 182 2e-44 UniRef50_B6GAE7 Putative uncharacterized protein n=2 Tax=Collins... 181 7e-44 UniRef50_C8WPP3 Signal transduction histidine kinase, LytS n=2 T... 178 5e-43 UniRef50_C8W8F7 Signal transduction histidine kinase, LytS n=3 T... 165 4e-39 UniRef50_D2B6F5 Signal transduction histidine kinase, LytS n=1 T... 164 6e-39 UniRef50_A4E9W6 Putative uncharacterized protein n=1 Tax=Collins... 157 1e-36 UniRef50_C5RQ55 Signal transduction histidine kinase, LytS n=2 T... 156 3e-36 UniRef50_C6WDP3 Signal transduction histidine kinase, LytS n=2 T... 155 3e-36 UniRef50_A4E9X1 Putative uncharacterized protein n=2 Tax=Collins... 155 3e-36 UniRef50_UPI0001B586EC signal transduction histidine kinase, Lyt... 152 4e-35 UniRef50_C5RJD6 Sensor protein n=1 Tax=Clostridium cellulovorans... 152 5e-35 UniRef50_A6LQW2 Signal transduction histidine kinase, LytS n=1 T... 151 7e-35 UniRef50_B8FU12 Signal transduction histidine kinase, LytS n=2 T... 148 4e-34 UniRef50_C9NAB2 Signal transduction histidine kinase, LytS n=6 T... 147 2e-33 UniRef50_A0JUQ0 Signal transduction histidine kinase, LytS n=8 T... 146 2e-33 UniRef50_A9U7N0 Predicted protein n=1 Tax=Physcomitrella patens ... 144 7e-33 UniRef50_B1HZJ7 Sensor protein n=3 Tax=Bacillaceae RepID=B1HZJ7_... 143 2e-32 UniRef50_C4FAQ4 Putative uncharacterized protein n=1 Tax=Collins... 141 8e-32 UniRef50_A9U6T1 Predicted protein (Fragment) n=1 Tax=Physcomitre... 139 2e-31 UniRef50_UPI00016C0712 two-component sensor histidine kinase n=1... 138 5e-31 UniRef50_Q2S4J4 Histidine kinase family n=1 Tax=Salinibacter rub... 137 7e-31 UniRef50_C0Z9X4 Sensor protein n=2 Tax=Bacillales RepID=C0Z9X4_B... 137 8e-31 UniRef50_C1F299 Regulator of cell autolysis n=1 Tax=Acidobacteri... 137 2e-30 UniRef50_B3E2Y4 Signal transduction histidine kinase, LytS n=1 T... 136 2e-30 UniRef50_C0D485 Putative uncharacterized protein n=1 Tax=Clostri... 136 2e-30 UniRef50_A1TDT4 Signal transduction histidine kinase, LytS n=9 T... 136 2e-30 UniRef50_Q1ILF7 Periplasmic sensor signal transduction histidine... 134 1e-29 UniRef50_C6CV50 Sensor protein n=1 Tax=Paenibacillus sp. JDR-2 R... 134 1e-29 UniRef50_C0Z9Z8 Sensor protein n=1 Tax=Brevibacillus brevis NBRC... 133 1e-29 UniRef50_C1ABX0 Two-component histidine kinase n=1 Tax=Gemmatimo... 133 2e-29 UniRef50_C5RJF6 Histidine kinase n=1 Tax=Clostridium cellulovora... 133 2e-29 UniRef50_C1AA09 Two-component histidine kinase n=1 Tax=Gemmatimo... 133 2e-29 UniRef50_C7H4I2 Periplasmic sensor signal transduction histidine... 132 4e-29 UniRef50_A6G9H0 Histidine kinase internal region n=1 Tax=Plesioc... 132 5e-29 UniRef50_Q02A00 Signal transduction histidine kinase, LytS n=1 T... 131 6e-29 UniRef50_A4FIX1 ATP-binding region, ATPase-like n=4 Tax=Actinomy... 131 6e-29 UniRef50_A4F5Z4 Sensor kinase, two-component system n=24 Tax=Act... 131 7e-29 UniRef50_A8R813 Putative uncharacterized protein n=1 Tax=Eubacte... 131 8e-29 UniRef50_C4KYR3 Signal transduction histidine kinase, LytS n=1 T... 130 1e-28 UniRef50_D0XXI3 Signal transduction histidine kinase, LytS n=1 T... 130 2e-28 UniRef50_C6JC63 Two-component sensor kinase yesM n=1 Tax=Ruminoc... 130 2e-28 UniRef50_Q1YRG0 Sensor histidine kinase n=1 Tax=gamma proteobact... 129 2e-28 UniRef50_A8RP74 Putative uncharacterized protein n=1 Tax=Clostri... 129 2e-28 UniRef50_C1A6M8 Two-component histidine kinase n=1 Tax=Gemmatimo... 129 3e-28 UniRef50_C8XT87 Putative periplasmic sensor signal transduction ... 129 3e-28 UniRef50_C6PAR5 Histidine kinase n=1 Tax=Thermoanaerobacterium t... 129 4e-28 UniRef50_Q1IJB8 Periplasmic sensor signal transduction histidine... 129 4e-28 UniRef50_B8FUP0 Signal transduction histidine kinase, LytS n=3 T... 128 5e-28 UniRef50_Q028U8 Signal transduction histidine kinase, LytS n=1 T... 128 5e-28 UniRef50_Q21EF5 Sensory transduction protein kinase AlgZ n=1 Tax... 128 5e-28 UniRef50_Q023F5 Signal transduction histidine kinase, LytS n=1 T... 128 6e-28 UniRef50_Q5WIY4 Two-component sensor histidine kinase n=1 Tax=Ba... 128 6e-28 UniRef50_A4A8V1 Sensor protein lytS n=2 Tax=unclassified Gammapr... 128 7e-28 UniRef50_A3DFT2 Signal transduction histidine kinase, LytS n=5 T... 127 9e-28 UniRef50_B9MP60 Signal transduction histidine kinase, LytS n=2 T... 127 1e-27 UniRef50_A1ZYA0 Regulator of cell autolysis n=1 Tax=Microscilla ... 127 2e-27 UniRef50_C7IC54 Signal transduction histidine kinase, LytS n=1 T... 126 2e-27 UniRef50_B8FP92 Sensor protein n=1 Tax=Desulfitobacterium hafnie... 126 2e-27 UniRef50_A5G4A3 Signal transduction histidine kinase, LytS n=1 T... 126 3e-27 UniRef50_B8I4I2 Putative sensor with HAMP domain n=2 Tax=Clostri... 125 3e-27 UniRef50_Q9KBL7 Two-component sensor histidine kinase n=1 Tax=Ba... 125 3e-27 UniRef50_C6IXH6 Histidine kinase internal region n=2 Tax=Bacilla... 125 3e-27 UniRef50_P94586 Putative uncharacterized protein ywpD n=4 Tax=Ba... 125 4e-27 UniRef50_A1TXX1 Sensory transduction protein kinase AlgZ n=3 Tax... 125 4e-27 UniRef50_B8FU66 Signal transduction histidine kinase, LytS n=2 T... 125 5e-27 UniRef50_UPI0001B9ED30 integral membrane sensor hybrid histidine... 125 6e-27 UniRef50_B8KJQ3 Sensor histidine kinase n=1 Tax=gamma proteobact... 124 7e-27 UniRef50_Q9KBB5 Sensor protein n=1 Tax=Bacillus halodurans RepID... 124 9e-27 UniRef50_D0MJT6 Signal transduction histidine kinase, LytS n=1 T... 124 1e-26 UniRef50_C0C5Z3 Putative uncharacterized protein n=1 Tax=Clostri... 124 1e-26 UniRef50_C5BUE4 Signal transduction ATPase, FimS family n=1 Tax=... 124 1e-26 UniRef50_C6J5N7 Putative uncharacterized protein n=1 Tax=Paeniba... 123 2e-26 UniRef50_C6CVD9 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2... 123 2e-26 UniRef50_A6G242 Histidine kinase internal region n=1 Tax=Plesioc... 123 2e-26 UniRef50_C6LLN0 Putative sensor histidine kinase n=1 Tax=Bryante... 123 2e-26 UniRef50_C7PEQ2 Signal transduction histidine kinase, LytS n=1 T... 123 2e-26 UniRef50_A8RW55 Putative uncharacterized protein n=1 Tax=Clostri... 122 3e-26 UniRef50_UPI0001C36197 putative sensor with HAMP domain n=1 Tax=... 122 3e-26 UniRef50_C6CXK8 Signal transduction histidine kinase, LytS n=1 T... 122 3e-26 UniRef50_Q15T86 Signal transduction histidine kinase, LytS n=9 T... 122 3e-26 UniRef50_C6D7S5 Cache sensor signal transduction histidine kinas... 122 3e-26 UniRef50_C6IWB4 Histidine kinase internal region n=1 Tax=Paeniba... 122 3e-26 UniRef50_Q0QJA2 Putative histidine kinase n=1 Tax=Pseudoalteromo... 122 3e-26 UniRef50_Q893H6 Two-component sensor kinase yesM n=1 Tax=Clostri... 122 4e-26 UniRef50_B8G1V5 Sensor protein n=2 Tax=Desulfitobacterium hafnie... 122 4e-26 UniRef50_Q2SQ68 Predicted signal transduction protein with a C-t... 122 5e-26 UniRef50_UPI0001BC574D histidine kinase internal region n=1 Tax=... 122 5e-26 UniRef50_C6J594 Histidine kinase internal region n=2 Tax=Bacilla... 121 6e-26 UniRef50_A8FI26 Sensor histidine kinase n=2 Tax=Bacillus pumilus... 121 6e-26 UniRef50_Q025Z8 Signal transduction histidine kinase, LytS n=1 T... 121 6e-26 UniRef50_UPI00017896B4 signal transduction histidine kinase, Lyt... 121 7e-26 UniRef50_C3WDI8 Two-component sensor histidine kinase n=1 Tax=Fu... 121 8e-26 UniRef50_A8RF93 Putative uncharacterized protein n=1 Tax=Eubacte... 121 8e-26 UniRef50_Q9KB25 BH2110 protein n=2 Tax=Bacillus RepID=Q9KB25_BACHD 121 8e-26 UniRef50_C6IXM7 Histidine kinase internal region n=2 Tax=Paeniba... 121 8e-26 UniRef50_C6W212 Signal transduction histidine kinase, LytS n=1 T... 121 9e-26 UniRef50_B0K3C6 Histidine kinase n=4 Tax=Thermoanaerobacter RepI... 121 9e-26 UniRef50_A0Y100 Regulator of cell autolysis (HATPase) n=1 Tax=Al... 120 9e-26 UniRef50_C6JHI9 Two-component sensor kinase yesM n=1 Tax=Ruminoc... 120 1e-25 UniRef50_Q2S5X6 Histidine kinase family n=1 Tax=Salinibacter rub... 120 1e-25 UniRef50_B8I0Y1 Putative sensor with HAMP domain n=1 Tax=Clostri... 120 1e-25 UniRef50_C5EE53 Histidine kinase internal region n=1 Tax=Clostri... 120 1e-25 UniRef50_A4XJ72 Integral membrane sensor signal transduction his... 120 2e-25 UniRef50_B1S7C3 Putative uncharacterized protein n=1 Tax=Bifidob... 120 2e-25 UniRef50_Q2RGN3 Histidine kinase n=1 Tax=Moorella thermoacetica ... 120 2e-25 UniRef50_C6J069 Signal transduction histidine kinase n=1 Tax=Pae... 120 2e-25 UniRef50_A6TUQ5 Signal transduction histidine kinase, LytS n=1 T... 120 2e-25 UniRef50_A6LVF8 Sensor protein n=1 Tax=Clostridium beijerinckii ... 120 2e-25 UniRef50_C5ENI0 Histidine kinase internal region n=3 Tax=Clostri... 120 2e-25 UniRef50_A8VUV2 Sensor protein n=2 Tax=Bacillus selenitireducens... 119 2e-25 UniRef50_UPI0001850905 two-component sensor histidine kinase n=1... 119 2e-25 UniRef50_Q2N6L9 Sensor histidine kinase n=3 Tax=Erythrobacter Re... 119 3e-25 UniRef50_Q0VM26 Two-component system sensor protein, alginate bi... 119 3e-25 UniRef50_C0D7L3 Putative uncharacterized protein (Fragment) n=1 ... 119 3e-25 UniRef50_D2Q7Y2 Two component system histidine kinase sensor n=1... 119 3e-25 UniRef50_C4G6T4 Putative uncharacterized protein n=1 Tax=Abiotro... 119 3e-25 UniRef50_C6CWF5 Putative sensor with HAMP domain n=1 Tax=Paeniba... 119 3e-25 UniRef50_C4FYZ1 Putative uncharacterized protein n=1 Tax=Abiotro... 119 3e-25 UniRef50_C1I3A2 Putative uncharacterized protein n=1 Tax=Clostri... 119 3e-25 UniRef50_C6IZN7 Integral membrane sensor signal transduction his... 119 3e-25 UniRef50_C5EEW5 Sensor histidine kinase n=1 Tax=Clostridiales ba... 119 3e-25 UniRef50_UPI0001788E92 integral membrane sensor hybrid histidine... 119 3e-25 UniRef50_B8I426 Putative sensor with HAMP domain n=2 Tax=Clostri... 119 4e-25 UniRef50_C5RJU0 Cache sensor signal transduction histidine kinas... 119 4e-25 UniRef50_C5EPK6 Predicted protein n=1 Tax=Clostridiales bacteriu... 119 4e-25 UniRef50_D2QR46 Signal transduction histidine kinase, LytS n=1 T... 118 5e-25 UniRef50_C1AAX4 Two-component histidine kinase n=1 Tax=Gemmatimo... 118 5e-25 UniRef50_Q0K9J0 Signal transduction histidine kinase n=2 Tax=Cup... 118 5e-25 UniRef50_Q1JFY4 Two-component sensor kinase yesM n=47 Tax=Strept... 118 6e-25 UniRef50_Q21NI6 Histidine kinase internal region n=1 Tax=Sacchar... 118 7e-25 UniRef50_B0K233 Integral membrane sensor signal transduction his... 118 7e-25 UniRef50_A6TTD2 Histidine kinase internal region n=1 Tax=Alkalip... 118 8e-25 UniRef50_A6TRZ9 Histidine kinase internal region n=1 Tax=Alkalip... 118 8e-25 UniRef50_C5EHR4 Histidine kinase internal region n=1 Tax=Clostri... 117 8e-25 UniRef50_B0NDZ6 Putative uncharacterized protein n=1 Tax=Clostri... 117 1e-24 UniRef50_Q1IJW3 Periplasmic senrsor signal transduction histidin... 117 1e-24 UniRef50_D2LZT5 Signal transduction histidine kinase, LytS n=1 T... 117 1e-24 UniRef50_UPI000185136F histidine kinase internal region n=1 Tax=... 117 1e-24 UniRef50_C6CT65 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2... 117 1e-24 UniRef50_D2MJZ9 Sensor signal transduction histidine kinase n=1 ... 117 1e-24 UniRef50_UPI0001BCDC23 histidine kinase internal region n=1 Tax=... 117 1e-24 UniRef50_A8RNT0 Putative uncharacterized protein n=1 Tax=Clostri... 117 1e-24 UniRef50_B5JKP7 Histidine kinase family n=1 Tax=Verrucomicrobiae... 117 2e-24 UniRef50_UPI0001788BFD signal transduction histidine kinase, Lyt... 117 2e-24 UniRef50_UPI0001C36B1D histidine kinase n=2 Tax=Clostridium hath... 116 2e-24 UniRef50_C6PMK7 Putative sensor with HAMP domain n=1 Tax=Clostri... 116 2e-24 UniRef50_C6J4K8 Integral membrane sensor signal transduction his... 116 2e-24 UniRef50_Q01UY7 Signal transduction histidine kinase, LytS n=1 T... 116 2e-24 UniRef50_Q2N6R8 Two-component signal transduction histidine kina... 116 2e-24 UniRef50_Q9K691 Two-component sensor histidine kinase n=1 Tax=Ba... 116 2e-24 UniRef50_A4XMX5 Integral membrane sensor signal transduction his... 116 2e-24 UniRef50_Q47XT4 Sensor histidine kinase n=2 Tax=Alteromonadales ... 116 3e-24 UniRef50_UPI0001973889 signal transduction histidine kinase, Lyt... 116 3e-24 UniRef50_A0Z2C0 Sensor histidine kinase n=1 Tax=marine gamma pro... 116 3e-24 UniRef50_UPI000178A843 multi-sensor signal transduction histidin... 116 3e-24 UniRef50_A4XHB7 Histidine kinase internal region n=1 Tax=Caldice... 115 3e-24 UniRef50_B2UAV4 Integral membrane sensor signal transduction his... 115 3e-24 UniRef50_UPI000178A0E3 integral membrane sensor signal transduct... 115 4e-24 UniRef50_Q5WAT9 Sensor protein n=1 Tax=Bacillus clausii KSM-K16 ... 115 4e-24 UniRef50_C1I2X2 Multi-sensor signal transduction histidine kinas... 115 5e-24 UniRef50_C6CVX1 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2... 115 5e-24 UniRef50_C0EIC1 Putative uncharacterized protein n=1 Tax=Clostri... 115 5e-24 UniRef50_D0I592 Autolysin sensor kinase n=1 Tax=Grimontia hollis... 115 5e-24 UniRef50_Q097A7 Two-component sensor histidine kinase n=1 Tax=St... 115 6e-24 UniRef50_UPI0001788A19 integral membrane sensor signal transduct... 115 6e-24 UniRef50_B8I617 Histidine kinase n=2 Tax=Clostridium RepID=B8I61... 115 6e-24 UniRef50_B8KBX0 Two component sensor histidine kinase n=1 Tax=Vi... 115 6e-24 UniRef50_B1ZMA6 Signal transduction histidine kinase, LytS n=1 T... 115 6e-24 UniRef50_C5BLH4 Putative uncharacterized protein n=1 Tax=Teredin... 115 6e-24 UniRef50_B7GJK8 Signal transduction histidine kinase n=1 Tax=Ano... 115 6e-24 UniRef50_Q9K6Q0 Two-component sensor histidine kinase n=2 Tax=Ba... 114 7e-24 UniRef50_C1YG57 Putative regulator of cell autolysis n=1 Tax=Noc... 114 7e-24 UniRef50_C9AYH0 Histidine kinase n=5 Tax=Enterococcus RepID=C9AY... 114 7e-24 UniRef50_C5RDS9 Putative sensor with HAMP domain n=1 Tax=Clostri... 114 7e-24 UniRef50_UPI0001789617 integral membrane sensor signal transduct... 114 7e-24 UniRef50_A9KS48 Signal transduction histidine kinase, LytS n=1 T... 114 8e-24 UniRef50_C5EHM0 Histidine kinase internal region n=1 Tax=Clostri... 114 8e-24 UniRef50_C6Y3D0 Histidine kinase internal region n=1 Tax=Pedobac... 114 8e-24 UniRef50_Q1GUM3 Signal transduction histidine kinase, LytS n=1 T... 114 9e-24 UniRef50_A4XMI4 Signal transduction histidine kinase, LytS n=1 T... 114 9e-24 UniRef50_C9L4P8 Putative two-component sensor histidine kinase n... 114 1e-23 UniRef50_C5ENT9 Signal transduction histidine kinase n=2 Tax=Clo... 114 1e-23 UniRef50_D1Y5U2 Histidine kinase n=1 Tax=Pyramidobacter piscolen... 114 1e-23 UniRef50_Q2BFM1 Putative uncharacterized protein n=1 Tax=Bacillu... 114 1e-23 UniRef50_C0D790 Putative uncharacterized protein n=1 Tax=Clostri... 114 1e-23 UniRef50_UPI0001787F84 integral membrane sensor signal transduct... 114 1e-23 UniRef50_C5EHD7 Sensor histidine kinase n=3 Tax=Clostridiales Re... 114 1e-23 UniRef50_O31516 Sensor histidine kinase yesM n=2 Tax=Bacillus su... 114 1e-23 UniRef50_C6CTF8 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2... 114 1e-23 UniRef50_Q2S054 Two-component signal transduction histidine kina... 114 1e-23 UniRef50_C4ZBY3 Putative uncharacterized protein n=6 Tax=Clostri... 114 1e-23 UniRef50_UPI0001788F16 integral membrane sensor signal transduct... 114 1e-23 UniRef50_C6J483 Multi-sensor signal transduction histidine kinas... 114 1e-23 UniRef50_C0DBS6 Putative uncharacterized protein n=1 Tax=Clostri... 114 1e-23 UniRef50_A5Z5R4 Putative uncharacterized protein n=1 Tax=Eubacte... 113 2e-23 UniRef50_Q01R05 Histidine kinase internal region n=1 Tax=Candida... 113 2e-23 >UniRef50_P0AA94 Inner membrane protein ypdA n=114 Tax=Bacteria RepID=YPDA_ECO57 Length = 565 Score = 1154 bits (2985), Expect = 0.0, Method: Compositional matrix adjust. Identities = 565/565 (100%), Positives = 565/565 (100%) Query: 1 MHEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFST 60 MHEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFST Sbjct: 1 MHEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFST 60 Query: 61 WSGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSIL 120 WSGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSIL Sbjct: 61 WSGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSIL 120 Query: 121 AGCISGWINLKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILG 180 AGCISGWINLKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILG Sbjct: 121 AGCISGWINLKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILG 180 Query: 181 SVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIH 240 SVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIH Sbjct: 181 SVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIH 240 Query: 241 ADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSM 300 ADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSM Sbjct: 241 ADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSM 300 Query: 301 LVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAE 360 LVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAE Sbjct: 301 LVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAE 360 Query: 361 LRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKEL 420 LRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKEL Sbjct: 361 LRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKEL 420 Query: 421 YQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTI 480 YQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTI Sbjct: 421 YQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTI 480 Query: 481 SVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRRL 540 SVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRRL Sbjct: 481 SVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRRL 540 Query: 541 EPGTEIAFYIPNQRTPVASQATLLL 565 EPGTEIAFYIPNQRTPVASQATLLL Sbjct: 541 EPGTEIAFYIPNQRTPVASQATLLL 565 >UniRef50_C5VR12 Sensor protein LytS n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VR12_CLOBO Length = 557 Score = 476 bits (1226), Expect = e-133, Method: Compositional matrix adjust. Identities = 241/552 (43%), Positives = 380/552 (68%), Gaps = 9/552 (1%) Query: 6 NMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVP 65 +++ + + ++ F L + ++++ K + K+L+ ++ +F F + T+ G Sbjct: 3 DLIKNLINNMGYFILIAFVLSQCESLKKIIVKDEFNKKDLVILSIVFGGFGILGTYIGTE 62 Query: 66 VEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCIS 125 + G++ N RI+ VM+GGIL GP++GI++ +I+GIHR LI+ GG+TAIPC +T++ G I Sbjct: 63 IHGAIANTRIVGVMAGGILCGPFIGILSAIISGIHRVLIESGGLTAIPCAVTTVACGFIG 122 Query: 126 GWINLKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILG-SVCI 184 G+++ ++ RW G+LGG+ ETL MIL+++++ + + IV I IPM L +V I Sbjct: 123 GFLHKYTNQSNRWLYGLLGGLGVETLEMILILIFSKPFYVALSIVKNIYIPMGLANAVGI 182 Query: 185 GFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIHADAV 244 ++LL++++ EKE AA+QAK++LDIANKTLP FR +N+ES K+C+II++ I +DAV Sbjct: 183 SLLILLIENIFEEKEEIAAKQAKISLDIANKTLPYFREINAESFEKICKIIKEYIKSDAV 242 Query: 245 AITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDE-----AHRTPEIHS 299 AIT+ HVLA+VG+G ++ G + ++ T + + GKI+ N E H P + S Sbjct: 243 AITDKKHVLAHVGLGADHHIKGAEILTHATEKVIKQGKILTLTNAEEINCSCHSCP-LKS 301 Query: 300 MLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKA 359 +++PL E+ + GTLKIYY I+ + +A+GLSQIISTQLE+S+ +L+EMA KA Sbjct: 302 GIIVPLKERKNIIGTLKIYYGKNDAISFKNKNLAIGLSQIISTQLEISKIGKLKEMATKA 361 Query: 360 ELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKE 419 E++ALQ++INPHFLFN+LN I+S +R+NP+ AR LI NLS +LRYN+E+ DD +D+ KE Sbjct: 362 EIKALQTQINPHFLFNSLNTIASFVRINPNKARDLIINLSTFLRYNLEMGDD-LVDVYKE 420 Query: 420 LYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVT 479 L Q+K Y+++E+ARFG+K++V Y+I ++ +PSL+IQP+VENAI HGI KG V Sbjct: 421 LEQVKAYVSVEKARFGEKISVAYNIQNNIDIKMPSLIIQPIVENAIKHGILNSGRKGKVK 480 Query: 480 ISVA-ECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIR 538 IS+ + N + V D G GI+ ++I++V + M NKIG+ NV++R+KL YG+GL+I Sbjct: 481 ISIELKSNNAFEVIVEDNGVGIEEEIIKKVYSGTMKENKIGISNVNNRLKLFYGQGLNIE 540 Query: 539 RLEPGTEIAFYI 550 RLE GT+++F + Sbjct: 541 RLEEGTKVSFIV 552 >UniRef50_A0PY88 Two-component sensor kinase n=2 Tax=Clostridium RepID=A0PY88_CLONN Length = 553 Score = 438 bits (1126), Expect = e-121, Method: Compositional matrix adjust. Identities = 245/550 (44%), Positives = 368/550 (66%), Gaps = 7/550 (1%) Query: 7 MLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPV 66 ++ ++ + ++ F L + + ++ K S K+L+ ++ +F + T+ G + Sbjct: 3 LIKSLINNIGYFILIAFVLSQCESLKNIIIKEEFSKKDLVILSILFGGLGILGTYIGTEI 62 Query: 67 EGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISG 126 G++ N RI+ VM+GGI GP +GI + +I+G HR LID GGVTAIPC IT++ +G I G Sbjct: 63 HGAIANTRIVGVMAGGIFCGPIIGIASSIISGTHRLLIDSGGVTAIPCAITTVASGFIGG 122 Query: 127 WINLKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPM-ILGSVCIG 185 ++ + RW G +GG++ ETL MIL+++++ L + IV I IPM ++ I Sbjct: 123 ILHKYANQTNRWIYGFIGGIVVETLEMILILIFSKPFDLAVHIVKNIYIPMGFANAIGIS 182 Query: 186 FIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIHADAVA 245 ++LL++++ +KE AA+QAKLALDIANKTLP FR ++S S K+C+II+ I ADAVA Sbjct: 183 LLILLIENIYEQKEEVAAKQAKLALDIANKTLPYFRDMDSRSFEKICKIIKKSIKADAVA 242 Query: 246 ITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDE----AHRTPEIHSML 301 IT+ HVLA+VG+GE ++ G + ++ T + + GKI+I N A+ + S + Sbjct: 243 ITDKKHVLAHVGLGEEHHIKGAEILTQATERVIKEGKILILTNASEINCAYPFCPLKSGI 302 Query: 302 VIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAEL 361 ++PL E+ + GTLKIYY + I+ + +A+GLSQIISTQLE+S+ +L++MA KAE+ Sbjct: 303 ILPLKERNNIIGTLKIYYGKNNSISFKNKNLAIGLSQIISTQLEISKIGKLKKMATKAEI 362 Query: 362 RALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELY 421 +ALQ++INPHFLFN+LN I+S +R+NP AR+LI NLS +LRYN+E+ DE +D+ EL Sbjct: 363 KALQTQINPHFLFNSLNTIASFVRINPAKARELIINLSVFLRYNLEI-GDELVDVYSELE 421 Query: 422 QIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTIS 481 Q+K Y+AIE+ARFG+KL VIY+I + ++ +PSL+IQP+VEN+I HGI KG+V I Sbjct: 422 QVKAYVAIEKARFGEKLQVIYNIQDNIDIKMPSLIIQPIVENSIKHGILKSGRKGIVKID 481 Query: 482 VAECGNRV-RIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRRL 540 + + +AV D G GI+ +IE+V M NKIG+ NV++R+KLLYGEGL I RL Sbjct: 482 IKYINDYAFEVAVEDNGVGIEKDIIEKVYNGTMKENKIGISNVNNRLKLLYGEGLKIERL 541 Query: 541 EPGTEIAFYI 550 E GT +F I Sbjct: 542 EEGTRASFII 551 >UniRef50_Q7P590 Autolysin sensor kinase n=10 Tax=Fusobacterium RepID=Q7P590_FUSNV Length = 558 Score = 397 bits (1019), Expect = e-109, Method: Compositional matrix adjust. Identities = 221/540 (40%), Positives = 342/540 (63%), Gaps = 15/540 (2%) Query: 20 ICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPVEGSLVNVRIIAVM 79 I FF IRI ++ +A + K+++A++ FSL ++ T+ G+ G+++N R + V+ Sbjct: 18 IIAFFFIRIDKANIIIKSNAKTKKDIIALSFFFSLLSISGTYIGLNFNGAILNTRNVGVI 77 Query: 80 SGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISGWINLKIPKAQRWR 139 +GGIL GP+V IITG++AGIHR +++G TAIPC I +I G ++ +++ I + Sbjct: 78 AGGILGGPYVAIITGLVAGIHRAFVNLGRETAIPCAIATITGGFLTAYVHRFIKSKDKIF 137 Query: 140 VGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMI-LGSVCIGFIVLLVQSVEGEK 198 G + E L+M L+++ L +IV+ +PM+ + S+ ++LLV+ + + Sbjct: 138 FGFFLACVVENLSMGLILIILKDKILAQNIVANFYVPMVFMNSIGSSVLILLVEDIIQKS 197 Query: 199 EASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGV 258 E A RQAKLAL+IANKTLP FR +E+L +VC+II +D+ A A ITN ++A Sbjct: 198 ELIAGRQAKLALEIANKTLPHFRE--TENLSEVCKIIAEDLGAKATVITNKKEIIAGFSF 255 Query: 259 GEHNYQNGDDFISPTTRQAMNYGK--IIIKNNDEAHR-----TPEIHSMLVIPLWEKGVV 311 + + D S TR+ + G+ ++IK +DE +P I S +++PL EK + Sbjct: 256 DKDKIKKADI-KSNNTRKVLKTGETMLVIKEDDEIIEDFLDISPHIKSCIILPLKEKNDI 314 Query: 312 TGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPH 371 +GTLKI++ A +IT + + +GLS +ISTQ+E+S+ E L + +EL+ALQS+INPH Sbjct: 315 SGTLKIFFDTAEKITDKNRYLMIGLSHLISTQMEISKVENLISLLKYSELKALQSQINPH 374 Query: 372 FLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQ 431 FLFN LN ++S IR NP+ AR++ +LS YLRYN++ + + +++ KEL Q+ YI IE+ Sbjct: 375 FLFNVLNTMTSLIRTNPEKAREVTIDLSNYLRYNLD-NNVKSVELIKELNQVNTYIKIEK 433 Query: 432 ARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVR 490 RFGDKL +IYD+DE + N IPSL+IQPLVEN+I HGI + G V I + + G + Sbjct: 434 VRFGDKLNIIYDVDESLYNFQIPSLIIQPLVENSIKHGILKKRDNGCVKIIIKKIGKDIE 493 Query: 491 IAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRRLEPGTEIAFYI 550 + + D G GI+ +I+ ++ + IGL NVH R+KLLYGEGL+I++LE GT I F I Sbjct: 494 VIIEDDGIGIEQTIIDNLD--KQIKENIGLKNVHQRLKLLYGEGLNIKKLEQGTRIKFKI 551 >UniRef50_C3WH60 Autolysin sensor kinase n=4 Tax=Fusobacterium RepID=C3WH60_9FUSO Length = 559 Score = 386 bits (992), Expect = e-106, Method: Compositional matrix adjust. Identities = 225/541 (41%), Positives = 346/541 (63%), Gaps = 16/541 (2%) Query: 20 ICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPVEGSLVNVRIIAVM 79 I FF I+I ++ A S K+++A++ FSL ++ T+ G+ G+++N R + V+ Sbjct: 18 IIAFFFIKIDKANIIIKSKAKSKKDVIALSFFFSLLSISGTYIGLNFNGAILNTRNMGVV 77 Query: 80 SGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISGWINLKIPKAQRWR 139 +GG+L GP+V +TG+IAGIHR ++++G TAIPC I +I+ G ++ +++ R Sbjct: 78 AGGLLGGPYVAALTGLIAGIHRAIVNLGRETAIPCAIATIIGGFLTAYVSRFAKNKDRMF 137 Query: 140 VGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMI-LGSVCIGFIVLLVQSVEGEK 198 L + E L+M L+++ AL IV IPM+ + SV ++LLV+ + + Sbjct: 138 FAFLLAFVVENLSMALILLIQKDKALAQSIVKNFYIPMVFMNSVGAAVLILLVEDIIQKS 197 Query: 199 EASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGV 258 E A QAKLAL+IANKTLP FR N+E+L +VC+II + + A A IT+T ++A Sbjct: 198 ELIAGSQAKLALEIANKTLPYFR--NTENLNEVCKIIANSLGARATVITDTKEIIAGFST 255 Query: 259 GEHNYQNGDDFISPTTRQAMNYGKI--IIKNNDEA------HRTPEIHSMLVIPLWEKGV 310 + + N + S TR+ + G++ +IK++++ + +P I S +++PL EK Sbjct: 256 -DKSVINRSNIRSNNTREVLKTGEVMLVIKDDEDEIIEDFFYISPHIKSCIILPLKEKND 314 Query: 311 VTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINP 370 V+GTLKI++ A +IT + + +GLS +ISTQ+E+S+ E L + +EL+ALQS+INP Sbjct: 315 VSGTLKIFFDTAEKITEKNRYLMIGLSHLISTQMEISKVENLISLLKYSELKALQSQINP 374 Query: 371 HFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIE 430 HFLFN LN ++S IR NP+ AR++ +LS YLRYN++ + + +++ KEL QI YI IE Sbjct: 375 HFLFNVLNTMTSLIRTNPEKAREVTIDLSNYLRYNLD-NNLKSVELIKELNQIDTYIKIE 433 Query: 431 QARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRV 489 +ARFG+KL +IYD+DE + N IPSL+IQPLVEN+I HGI + KG V I V + + Sbjct: 434 KARFGEKLNIIYDVDESLYNFQIPSLIIQPLVENSIKHGILKKRDKGFVKIIVKKIDKDI 493 Query: 490 RIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRRLEPGTEIAFY 549 +A+ D G GI+ VI+ ++ ++ N IGL NVH R+KLLYGEGL+I +LE GT I F Sbjct: 494 EVAIEDDGVGIEQAVIDNLDK-KIEEN-IGLKNVHQRLKLLYGEGLNITKLEQGTRIKFK 551 Query: 550 I 550 I Sbjct: 552 I 552 >UniRef50_A8MGZ4 Signal transduction histidine kinase, LytS n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MGZ4_ALKOO Length = 556 Score = 360 bits (925), Expect = 7e-98, Method: Compositional matrix adjust. Identities = 208/560 (37%), Positives = 344/560 (61%), Gaps = 20/560 (3%) Query: 3 EIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWS 62 EIF + + + + +LM + F L + F+ L+ +S K + + IFS F + T+ Sbjct: 2 EIFKIPITLLNSISLMFLITFLLSKTNSFKNLILNKKNSFKNKIFLAIIFSTFGILGTYY 61 Query: 63 GVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAG 122 G P+EG++ N R+I V+ GG+L GP+VGI GV+AG+HR++IDIGG T++ C I++++ G Sbjct: 62 GFPIEGAIANSRVIGVVVGGLLAGPFVGISAGVVAGVHRWVIDIGGFTSVACMISTVVGG 121 Query: 123 CI-SGWINLKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPM-ILG 180 + S K + W +G M+ E L M++VI+ A + +++V KI +PM ++ Sbjct: 122 ILGSIAYRYKDKVNKNWILGFSVTMVAEILQMLIVIIVAKPYPVAVNVVKKIIMPMTLMN 181 Query: 181 SVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VNSESLRKVCEIIRDDI 239 S+ + +LL++S+ E+E AA Q++LAL IA+KTLP+ R+ N E+ C+II Sbjct: 182 SIGVALFILLLESIFKEQEREAAIQSELALKIADKTLPILRNGFNQETASATCDIIYSIA 241 Query: 240 HADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGK-IIIKNNDE---AHRTP 295 DAVAITN ++A+VGVG ++ G+ + T+ A+ + +I++N +E ++ Sbjct: 242 KVDAVAITNKSEIIAHVGVGSDHHLPGETIKTVATKTALKLKRSVIVENKEEIGCQNKNC 301 Query: 296 EIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREM 355 ++ S +V+PL++K V G LKIY + I+S ++A L+++ STQ+E++ + ++ Sbjct: 302 KLKSTIVVPLFKKDQVIGVLKIYKATKNGISSVDVQLAEDLAKLFSTQIELAEIDYNAKL 361 Query: 356 ANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQI- 414 + AEL+ALQ++INPHFLFN++N I S R++P+ AR+L+ NL +LR + K++E I Sbjct: 362 LSIAELKALQAQINPHFLFNSINTIVSLCRIDPELARKLLINLGNFLRES--FKENEYIV 419 Query: 415 DIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKG 474 DI E+ ++ Y+ IE+ARFG KL V+YDI+ + N IP L++QPLVENA+ HGI P K Sbjct: 420 DISNEIKHVEAYLEIEKARFGKKLNVVYDINCD-NFKIPHLVLQPLVENAVKHGIYPKKD 478 Query: 475 KGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGE- 533 G + + + E I + D G G D A++ + IG+ NV R++ +YG+ Sbjct: 479 GGTIYVMIHEDLEHYIIHIEDNGIGFDSG------AHKPTHHGIGIKNVDKRLQSIYGKD 532 Query: 534 -GLHIRR-LEPGTEIAFYIP 551 GL I+ ++ GT+I IP Sbjct: 533 YGLKIQSTIDIGTKILINIP 552 >UniRef50_Q39S58 Histidine kinase internal region n=4 Tax=Bacteria RepID=Q39S58_GEOMG Length = 576 Score = 347 bits (890), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 212/566 (37%), Positives = 321/566 (56%), Gaps = 20/566 (3%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 + ++L+ + +R L I ++R + + L A S E L ++ +F + T+ G Sbjct: 1 MLHLLVNLLERLGLFAIAFILVMRFAIVKRFLIGKA-SRYEKLTLSVLFGFIGIAGTYMG 59 Query: 64 VPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGC 123 VP++ ++ N R++ V GGIL GP VG G+IAG HR+LID+GG TA C + +I G Sbjct: 60 VPIQNAIANSRVVGVALGGILGGPLVGFGAGLIAGGHRFLIDVGGFTATACGVATIAEGV 119 Query: 124 ISGWINLKIPKAQ-RWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL-GS 181 G I ++ + Q V + G+ ETL M++++V A + +VS IG PMIL S Sbjct: 120 AGGLIYHRLKRGQFDPAVAFITGVAVETLQMVILLVMAKPFTAAVSLVSVIGFPMILVNS 179 Query: 182 VCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSE-SLRKVCEIIRDDIH 240 + + V LV SV EKE AA QA+ AL+IA +TLP R +E S IIR+ Sbjct: 180 IGLALFVELVSSVFREKERFAAVQAQTALNIALRTLPFLRGGLTEGSAAATARIIREMTD 239 Query: 241 ADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIK-NNDE---AHRTPE 296 DAVAIT+ +LA+ G E +++ G ++ +TR A+ G+I D+ H Sbjct: 240 LDAVAITDEAAILAHTGAEEDHHRPGLPLLTASTRSALASGEITTPLTRDDIGCTHEGCR 299 Query: 297 IHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMA 356 + S +++PL ++ G LK+Y IT E+A GL+ + S QLE+S E R++ Sbjct: 300 LGSAIIVPLKKRERTVGALKLYRLKEGGITPLDMELANGLAHLFSNQLEISELEAQRKLV 359 Query: 357 NKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDI 416 +AE+RALQ++INPHFLFN +N I S R +P+TA L+ L+ + R NI D + + Sbjct: 360 REAEIRALQAQINPHFLFNTINTIISYTRTSPETASDLLVKLADFFRRNINPGGD-SVPL 418 Query: 417 KKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGK 475 EL + YIAIE+ARF D+L V++D+DEE + C +P+L +QPLVENA+ HGI P + Sbjct: 419 ATELEHCRAYIAIEKARFEDRLRVVFDVDEEALGCKLPTLTLQPLVENALKHGILPREEG 478 Query: 476 GVVTISVAECGNRVRIAVRDTGHGIDPKVIERV---EANEMP--GNKIGLLNVHHRVKLL 530 G + + G VRI V D G G+ P+ + R+ E++++P G I L NV+ R+ L Sbjct: 479 GEIRVGAHREGGVVRIVVGDNGVGMPPEQVARLFSGESSQLPTEGAGIALNNVNARLSAL 538 Query: 531 YGEGLHIRRLEP----GTEIAFYIPN 552 YG H R+E GT ++F +P Sbjct: 539 YGPE-HALRVESTPGAGTTVSFTVPQ 563 >UniRef50_A1HTW6 Signal transduction histidine kinase, LytS n=2 Tax=Bacteria RepID=A1HTW6_9FIRM Length = 564 Score = 336 bits (862), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 197/566 (34%), Positives = 319/566 (56%), Gaps = 18/566 (3%) Query: 1 MHEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFST 60 M + +M+L+ R A++ + + + FR L+ +P+E + FS ++ T Sbjct: 1 MTDSLSMVLS--QRIAIIAVVAYIFSQTNAFR-LMFTENTTPREKCILILFFSTVSIAGT 57 Query: 61 WSGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSIL 120 + G+P+EG++ NVR + G+L GP VG TG+I+G+HR I +GG TA+PC + +I+ Sbjct: 58 YFGIPIEGAIANVRDTGSIVAGLLGGPLVGTATGLISGLHR--ISLGGFTAVPCGLATII 115 Query: 121 AGCISGWINLKI-PKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL 179 G +G+++ K PK W G+L G+ +M L+++++ A +V ++ +PM L Sbjct: 116 GGIFAGYVHSKTRPKTTEWITGVLIGVAVILFSMALILLFSKPAAAARSLVMQVTVPMCL 175 Query: 180 G-SVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSE-SLRKVCEIIRD 237 ++ I ++++ + + A Q AL IAN LP FR S+ S KV I + Sbjct: 176 ANALGIAVFMIIIHNAREHQTKIGALQTNKALRIANAALPYFRQGLSDLSAEKVAATILN 235 Query: 238 DIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEA----HR 293 A AVAITN + VLA+VG+G ++ NG ++ T+ + G++ + H Sbjct: 236 MTSAAAVAITNREKVLAHVGLGSDHHTNGRPLLTAATKSCLESGQVTVAQRSSEIGCIHP 295 Query: 294 TPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLR 353 + S +V+PL+ + + GTLK+YY +T+ E A GL QI+STQLE++ +Q Sbjct: 296 NCPLKSAVVVPLYCRDEIVGTLKMYYALEEAMTALDLEFAQGLGQILSTQLELANLQQKA 355 Query: 354 EMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQ 413 E+A KAEL+AL+++INPHFLFNALN I S R NP+ AR L+ LS + R +++ D Sbjct: 356 ELAAKAELKALRAQINPHFLFNALNTIVSLCRTNPEQARNLLIELSDFFRRSLKSARDF- 414 Query: 414 IDIKKELYQIKDYIAIEQARFGDKLTVIYDID-EEVNCCIPSLLIQPLVENAIVHGIQPC 472 + +++EL + Y+A+E+ARFG +LTV+ DID +N +P+ +QPLVEN + HG+ Sbjct: 415 VTLREELEHVDSYLALEKARFGRRLTVVKDIDAAALNILLPAFTLQPLVENGVKHGLLAK 474 Query: 473 KGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEM-PGNKIGLLNVHHRVKLLY 531 + G + IS G+ V I + D G GI + E + GN IGL NV+ R+K +Y Sbjct: 475 EEGGTIRISAHCQGSDVHITISDDGQGIPSSIQEHILVCGFGKGNGIGLSNVNERLKTIY 534 Query: 532 GEGLHIR---RLEPGTEIAFYIPNQR 554 G ++ R GT + ++P R Sbjct: 535 GPQYALKINSREGKGTTVKLHVPISR 560 >UniRef50_Q5YL06 Putative sensor protein n=1 Tax=Aeromonas hydrophila RepID=Q5YL06_AERHY Length = 440 Score = 335 bits (858), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 169/300 (56%), Positives = 225/300 (75%), Gaps = 1/300 (0%) Query: 7 MLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPV 66 MLLAVF+RAALML+ LFFL R R F+ L K H+P EL+ V AIF LFA+FST++G+PV Sbjct: 2 MLLAVFERAALMLMTLFFLTRTRPFQRLFQKRDHTPAELVLVAAIFCLFAVFSTYTGIPV 61 Query: 67 EGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISG 126 EG+L+NVRIIA++SGGILFGPWVGI GVI+G+HRYLID+ G T+IPC I SI+AG ++ Sbjct: 62 EGALINVRIIAIISGGILFGPWVGIPAGVISGLHRYLIDMDGHTSIPCLIASIIAGLLAT 121 Query: 127 WINLKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILGSVCIGF 186 W++L+ K++ W GIL GM CE LTM+L+ A+G++IVS I PMI G++CIG Sbjct: 122 WLHLRCRKSRLWLYGILAGMACEGLTMLLIWQLTEPHAVGVEIVSHIAYPMIAGALCIGL 181 Query: 187 IVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIHADAVAI 246 I+ LVQ ++ EKE AA+QAKLALDIANKTLP F++++ SL +VC IIR +I ADAVAI Sbjct: 182 IIKLVQDLDDEKELIAAKQAKLALDIANKTLPFFQNIDRHSLSQVCGIIRSEISADAVAI 241 Query: 247 TNTDHVLAYVGVGEHNYQ-NGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSMLVIPL 305 T+T VLAYVGVG+ Y+ + IS T++A+ +III N+ + + HS+++IPL Sbjct: 242 TDTRDVLAYVGVGKDYYELDEHHAISAMTQRAVLLDQIIINNDLRQYHLSDFHSVIIIPL 301 >UniRef50_Q5WAM1 Two-component sensor histidine kinase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WAM1_BACSK Length = 597 Score = 327 bits (839), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 200/561 (35%), Positives = 324/561 (57%), Gaps = 35/561 (6%) Query: 23 FFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPVEG-------------- 68 F R+R FR ++ + + K+ F F + T+SGV + Sbjct: 20 FIATRMRFFRVMVKSTRLTRKQTWTAILFFGAFGIIGTYSGVTFQAESLVLQRITFGIQE 79 Query: 69 --SLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISG 126 ++ N R+I V+ G+ G VG+ G+IAG+HR L+ GG TA C I +I+AG + Sbjct: 80 DAAIANFRVIGVVLAGLFGGYKVGLSAGLIAGVHRMLL--GGFTAFSCGIATIVAGLFAA 137 Query: 127 WINLKIPKAQRWRVGI-LGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL--GSVC 183 + K P A + I L G L ET+ M L+ + A TA I +V IG+PMI+ G C Sbjct: 138 FYRSKNPNAVNRPLSIFLLGALAETVQMGLIALLANPTAAAISLVQTIGLPMIVANGIGC 197 Query: 184 IGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VNSESLRKVCEIIRDDIHAD 242 F+ L++QSV E++ + A QA+ +L IA +TL F+H ++S S ++VC+I+ +++A Sbjct: 198 TLFL-LIIQSVTKEEQKAGALQAQKSLRIAEQTLAHFKHGLSSHSAKEVCDILYKELNAC 256 Query: 243 AVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAH-RTPE--IHS 299 A+A+TN D +LA++GV +++ + T + + ++II +DE H + P + + Sbjct: 257 AIAMTNQDMILAHIGVAADHHKTNMSIQTKLTAEVIAKKQMIIAGDDEIHCKEPNCPLGA 316 Query: 300 MLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKA 359 ++ PL + V GTLK Y+ +IT EM GL+ ++S+QLE++ A++ ++A +A Sbjct: 317 AVIAPLIIRAEVVGTLKFYFHSKKEITELETEMLSGLTNLLSSQLELAEADRAYQLAKEA 376 Query: 360 ELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKE 419 E+ ALQ++I+PHFLFN LN + S IR+ P AR ++ +L+++LR N+ + + +E Sbjct: 377 EINALQAQISPHFLFNTLNTVISLIRIEPMKARTMLHSLAQFLRQNVSATTTKLHSLAEE 436 Query: 420 LYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVV 478 L+ IK Y++IE+ RF +LTV Y IDE ++ IP L +QPLVENA+ HG + + V+ Sbjct: 437 LHHIKAYLSIEEVRFEGRLTVQYKIDERFLHVSIPPLTLQPLVENAMKHGFKNKRSDCVL 496 Query: 479 TISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMP----GNKIGLLNVHHRVKLLYG-E 533 ISV E G V ++V+D G G DP ++++ NE+P G IGL N + R++++YG E Sbjct: 497 IISVQEQGEDVVLSVQDNGAGFDPDKLKKL-GNELPATDSGTGIGLYNSNKRLQMMYGPE 555 Query: 534 GLHIRRLEP--GTEIAFYIPN 552 +P GT + F IP Sbjct: 556 ASLAFSAQPGRGTLVRFRIPK 576 >UniRef50_Q3AA02 Sensor histidine kinase n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AA02_CARHZ Length = 552 Score = 323 bits (828), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 201/544 (36%), Positives = 323/544 (59%), Gaps = 32/544 (5%) Query: 1 MHEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFST 60 M+E+F + + +R ++++ FF+ + RLFR +L + + ++ L + F LF + T Sbjct: 1 MNELF---INLIERLSVIITLAFFVSKTRLFRNILQQEL-TIRQKLGLILGFGLFGIIGT 56 Query: 61 WSGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSIL 120 + G+P++G++ N R++ GI+ GP G++ G+IAG+HR + GG TA+ C I++ + Sbjct: 57 YWGIPIKGAIANSRVVGPAIAGIIGGPAAGLLAGLIAGVHRAWL--GGFTAVACGISTTV 114 Query: 121 AGCISGWINLKIPKAQRWRV--GILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMI 178 G I+G + + P+ +R+ V GIL GM ETL MI++++ A + +V IG+PMI Sbjct: 115 EGLIAGVLARRFPE-KRFNVVFGILTGMFIETLQMIIILLLARPFEDALSLVKVIGLPMI 173 Query: 179 L-GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VNSESLRKVCEIIR 236 L + IG +L+++S EKE A A+ AL+IAN+TLP+ R +N E+ KV II Sbjct: 174 LVNGIGIGVFLLILESTVKEKEHIGAVYAEKALNIANETLPILREGLNRETAFKVSRIIL 233 Query: 237 DDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEA----H 292 + ADAVA+T+ + +LA+VG GE ++ +G + T +A+N G++ + N EA + Sbjct: 234 NKTDADAVALTDKNIILAHVGSGEDHHLSGTPIKTAATAKALNNGELTVVLNKEAIGCSN 293 Query: 293 RTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQL 352 ++ S ++ PL+ + V G LK+YY +I GLS++ISTQLE+S E Sbjct: 294 SNCKLASAVIAPLFIRNEVVGALKLYYNKPDKIGEFTITFIEGLSRLISTQLELSMLEHQ 353 Query: 353 REMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDE 412 ++ +AEL+ALQ++INPHFLFN+LN I + R NPD AR+LI LS Y R N+ + + Sbjct: 354 AKLLARAELKALQAQINPHFLFNSLNTIVALCRKNPDQARELIIKLSEYFRRNLR-EWEP 412 Query: 413 QIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQP 471 I + +EL ++ Y+ E+ARF DKL V +ID++V +P ++ LVENA+ HGI P Sbjct: 413 LIPLAEELKNVELYLTFEKARFSDKLQVNLNIDDKVKEVMVPPFAVETLVENAVKHGILP 472 Query: 472 CKGKGVVTISVAECGNRVRIAVRDTGHGI--DPKVIERVEANEMPGNKIGLLNVHHRVKL 529 KG G+V I+ N+ I + D G G+ D KV +GL N+ R++ Sbjct: 473 KKG-GLVQINAKLQDNKAVIEIVDNGVGLREDVKV------------GVGLSNLKERLRN 519 Query: 530 LYGE 533 L+ E Sbjct: 520 LFRE 523 >UniRef50_A8VV76 Signal transduction histidine kinase, LytS n=3 Tax=Bacillus RepID=A8VV76_9BACI Length = 625 Score = 320 bits (820), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 195/579 (33%), Positives = 333/579 (57%), Gaps = 36/579 (6%) Query: 3 EIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWS 62 E+F ++L +R ++++ F + RI +FR ++ + + + ++VT +F F + T++ Sbjct: 39 ELFVIML---ERLGIIVMVAFIMTRIPIFRRVVDDRSVTFSQKVSVTLLFGFFGIIGTYT 95 Query: 63 GVPV----------------EGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDI 106 GV V + ++VN R+I ++ G+L G VG+ GVIAG HR+L+ Sbjct: 96 GVVVSTGQASYMMWLSELAEDEAIVNARVIGIVVAGLLGGWKVGLGAGVIAGGHRFLL-- 153 Query: 107 GGVTAIPCFITSILAGCISGWINLKIPKAQRWRVGI--LGGMLCETLTMILVIVWAPTTA 164 GG T C +++I+AG ++G+ + + K + +G+ G L ET+ M ++++ A Sbjct: 154 GGFTGFACGLSAIIAGLLAGFAHRYVDKGKNISLGVTFFVGALSETIQMGIILLVARPYE 213 Query: 165 LGIDIVSKIGIPMILGS-VCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH- 222 +V IG+PMIL + V VL+++SV E+E AA Q+ AL IA T+ R Sbjct: 214 QAFALVEMIGLPMILANGVGAAVFVLIIRSVIREEEKLAAVQSGRALSIAEDTISFMRQG 273 Query: 223 VNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGK 282 + + S + C+I+ ++ A AV++T+ + +LAY G G YQ G + TRQ +N G+ Sbjct: 274 LTTASAGQTCQILLKEVGASAVSMTDRERILAYYGKGVDIYQAGGPIRTEATRQVLNQGE 333 Query: 283 IIIKNNDEAHRT----PEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQ 338 I + +T P+IH+ +++PL EK V GTLK Y+ +IT +E+ +GLS+ Sbjct: 334 PYIGTQNRQDQTENLYPDIHAAMIVPLMEKDSVIGTLKFYFPTEKEITPLKRELILGLSR 393 Query: 339 IISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNL 398 ++S QLE++R E+LR +A + E++ALQ++++PHFLFNALN I S IR +P+ AR+L+ +L Sbjct: 394 LLSNQLELARVEELRHLAQETEVKALQAQVSPHFLFNALNLIVSMIRTDPERARKLLLSL 453 Query: 399 SRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLI 457 S + R N+ + + +EL QI+ Y+ I++ARF +L V +++D+ +N IP+L + Sbjct: 454 SHFFRQNLAGTNQTWSTLGQELKQIESYLEIQEARFQGELNVRWEVDDTLLNWQIPTLTM 513 Query: 458 QPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPK---VIERVEANEMP 514 QPL+ENAI HG + + VT+ + VR+ + + G I + ++ + + Sbjct: 514 QPLIENAIKHGRKAAREPLDVTVRIERVAESVRVTIWNNGRAIPHERLALLAKGPVHSEE 573 Query: 515 GNKIGLLNVHHRVKLLY--GEGLHIRR-LEPGTEIAFYI 550 G IGL NVH R+ + GL IR + GT I+F + Sbjct: 574 GAGIGLYNVHKRLTEMRVSEAGLSIRSDDQAGTSISFLL 612 >UniRef50_Q2RH26 Histidine kinase internal region n=3 Tax=Bacteria RepID=Q2RH26_MOOTA Length = 576 Score = 316 bits (810), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 192/564 (34%), Positives = 326/564 (57%), Gaps = 22/564 (3%) Query: 5 FNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGV 64 ++M L + +R +++ F L R +L + + ++ L + + + T++G+ Sbjct: 3 WSMGLHLAERLSMVATAAFILSRTPALGRILSRQL-TNRDRLLLVLVLGGMGIVGTYAGI 61 Query: 65 PVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCI 124 P+ +L N R++ VM G+L GP+VG G+IAGIHRYL+ GG TA C + ++ G + Sbjct: 62 PIHDALANSRVVGVMVAGLLGGPFVGAGAGLIAGIHRYLM--GGFTAFACGLAAVAEGTL 119 Query: 125 SGWINLKIPKAQ-RWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL-GSV 182 G + ++ W + G++ ET+ M+++++ A +V IG PMI+ S+ Sbjct: 120 GGLVQQCYRRSPVPWPMAFAAGLVGETMQMVIILLTARPFTEAWALVQIIGPPMIIVNSI 179 Query: 183 CIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VNSESLRKVCEIIRDDIHA 241 + + +V++ +++ AA QA+ ALDIAN+TLP RH +N ES + II + I Sbjct: 180 GVAIFMFIVKTAAEQQDHIAACQAQRALDIANQTLPFLRHGLNRESAEEAARIIFNSIKV 239 Query: 242 DAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKI-IIKNNDE---AHRTPEI 297 AVAIT+ +LA+VG+G ++ G ++ T QA+ G++ + ++ E + + Sbjct: 240 AAVAITDRQEILAHVGMGSDHHHPGMPIMTSATLQAIATGELQLARSRGEIGCREKDCRL 299 Query: 298 HSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMAN 357 S +V+PL + GTLK+Y+ + IT+ E+A GL+ + STQLE++ + ++ + Sbjct: 300 ASAVVVPLKRREATIGTLKLYHERENSITTVDLELARGLAHLFSTQLELAEVKYQAQLRS 359 Query: 358 KAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIK 417 +AEL+ LQ++I+PHFLFNALN ISS IR P+ AR+L+ L+ + RY++ +DD I + Sbjct: 360 QAELKVLQAQIHPHFLFNALNTISSLIRTRPEKARELLAKLASFFRYSLR-RDDNPIPLA 418 Query: 418 KELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKG 476 +EL + Y+AIE+ARFG+KL VI +D + +P+ +QP+VENAI HG+QP G Sbjct: 419 EELAHVDSYLAIEEARFGNKLEVIRQVDPATLAFPVPAFTLQPVVENAIKHGLQPRTQGG 478 Query: 477 VVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMP----GNKIGLLNVHHRVKLLYG 532 V ++ ++ G V + V D G GI P+ + ++ +P G+ +GL V+ R+K LYG Sbjct: 479 RVILNASDRGADVEVRVTDDGVGIAPEEMNKI---FLPGYGRGHGLGLSIVNERLKALYG 535 Query: 533 EGLHIR-RLEP--GTEIAFYIPNQ 553 +R + P GTE+ P + Sbjct: 536 PEYAVRVKSVPGQGTEVVLRFPKK 559 >UniRef50_A6TN09 Signal transduction histidine kinase, LytS n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TN09_ALKMQ Length = 559 Score = 310 bits (793), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 187/532 (35%), Positives = 317/532 (59%), Gaps = 11/532 (2%) Query: 30 LFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPVEGSLVNVRIIAVMSGGILFGPWV 89 +FR+L+ K + + + + +F + T+S VPV G++ N R++ VM GG+L GP V Sbjct: 28 IFRKLVTKKNITIIDKIILAVVFGAIGILGTYSSVPVNGAIANTRVVGVMVGGLLGGPVV 87 Query: 90 GIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISGWINLKIP-KAQRWRVGILGGMLC 148 G++ G+IAG HRY+IDIGG TA+ C + +I+ G I G+ + I K+Q+W+ + G+ Sbjct: 88 GVMAGMIAGGHRYVIDIGGFTALACAVATIIEGFIGGYAHFYIKNKSQKWKYTLFIGIFA 147 Query: 149 ETLTMILVIVWAPTTALGIDIVSKIGIPMIL-GSVCIGFIVLLVQSVEGEKEASAARQAK 207 E + M ++++ A +V I +PM+L S+ I + +++++ E E AA QA+ Sbjct: 148 EIVQMAIILLIARPFGDAFTLVKIILLPMVLVNSIGISLFIGIIENIHQEYERIAAGQAE 207 Query: 208 LALDIANKTLPLFRH-VNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNG 266 L IAN+TLP FR +N E ++V II + AV ITN +LA+ G E ++ Sbjct: 208 KTLKIANQTLPYFRQGLNEEVAKEVVNIIYHTVDVAAVTITNCKEILAHKGAEEDHHVPM 267 Query: 267 DDFISPTTRQAMNYG--KIIIKNNDEAHRTP--EIHSMLVIPLWEKGVVTGTLKIYYCHA 322 + +TR + G ++I D P ++ S++++PL E+ V GTLK+Y Sbjct: 268 CKLQTQSTRDVVISGEHRVIFHQRDIQCDQPKCQLKSVIIVPLKEREEVVGTLKLYKREE 327 Query: 323 HQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISS 382 + IT+ E+A+GL+Q+ STQ+E+SR + +++ +AEL+ LQ++INPHFLFN +N I S Sbjct: 328 NSITTLDVELALGLAQLFSTQIELSRLDYQKKLLAEAELKTLQAQINPHFLFNTINTIVS 387 Query: 383 SIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIY 442 ++++P A+QL+ +L+ R ++ + + +D++ E+ + Y+ IE+ARFGD+L V Y Sbjct: 388 FVQVDPTQAKQLLISLADLFRKSLS-NNQDMVDMETEIEHVASYLEIEKARFGDQLKVKY 446 Query: 443 DIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 ++ E + C +P L++QPLVENA++HGI P +G G + I + N V + + D G GI Sbjct: 447 ELQENITCKLPPLILQPLVENAVIHGILPKRGGGEIKILSKKLENCVLLEIVDNGLGISQ 506 Query: 503 KVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIR---RLEPGTEIAFYIP 551 + + + + +GL+NV+ R+ LYGE + ++ GT+I IP Sbjct: 507 ERLLTILKPVIDSKSVGLMNVNKRLINLYGEAYCLEVSSEVDHGTKIQVKIP 558 >UniRef50_C9RCQ9 Signal transduction histidine kinase, LytS n=4 Tax=Thermoanaerobacterales RepID=C9RCQ9_AMMDK Length = 572 Score = 308 bits (788), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 202/568 (35%), Positives = 322/568 (56%), Gaps = 30/568 (5%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 I ++LA +R +L+ F L R+ +L + SP++ L +T + + T++ Sbjct: 5 ILALILA--ERLSLIATAAFLLSRMPALGRILSRQP-SPRDKLLLTLVMGGLGILGTYAA 61 Query: 64 VPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGC 123 VP+ G+L N R++ VM G+L GP VG G+IAG+HRY + GG TA C + +++ G Sbjct: 62 VPIHGALANSRVVGVMVAGLLGGPLVGAGAGLIAGVHRYFL--GGFTAFACGLAAVVEGT 119 Query: 124 ISGWI------NLKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPM 177 + G + NL +P W + L G+ E L M ++++ A + +V IG+PM Sbjct: 120 LGGLVRHYYRRNL-VP----WHIAWLAGLTGEMLQMGIILLTARPFPEALALVKIIGLPM 174 Query: 178 I-LGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSE-SLRKVCEII 235 I + S+ + +L+V+S ++E AA QA+ AL IAN+TLP R SE S ++V II Sbjct: 175 ITVNSIGVAIFMLIVKSAVEQEERVAALQAQQALKIANQTLPYLRQGLSEHSAQQVASII 234 Query: 236 RDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDE----A 291 + AVAIT+ + +LA+VG G ++ G ++ T +A+ G+I + + Sbjct: 235 YHSLKVAAVAITDREKILAHVGTGSDHHHPGHPILTSATLKALATGEIQVAQTRKEIGCC 294 Query: 292 HRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQ 351 H + S +V+PL + GTLK+Y+ + IT E+A GL+++ STQLE++ E Sbjct: 295 HPNCRLGSAVVVPLKLRENTIGTLKLYHTQENSITPVNLELARGLARLFSTQLEIAELEY 354 Query: 352 LREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDD 411 + +AEL+ALQ++++PHFLFNALN I+S IR P AR+L+ L+++LR++ L+D+ Sbjct: 355 QARLKTQAELKALQAQVHPHFLFNALNTITSLIRTRPGEARELLVKLAKFLRHS--LRDE 412 Query: 412 EQ-IDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGI 469 I + +EL ++ Y+AIE+AR GDKL V Y +D + + L++QPLVENA+ HG+ Sbjct: 413 NTVIPLAEELSCVEAYLAIEKARQGDKLQVFYRVDPSALGYPVLPLILQPLVENAVKHGL 472 Query: 470 QPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVE-ANEMPGNKIGLLNVHHRVK 528 P G V I V + V I V+D G GI P + ++ A G +GL V+ R+K Sbjct: 473 YPKAEGGKVEIIVEDLPEEVMIMVKDDGIGIAPAELAKIPLAGYGRGRGLGLFLVNERLK 532 Query: 529 LLYGE--GLHIRRLE-PGTEIAFYIPNQ 553 YG GL I+ GTE++ P + Sbjct: 533 KFYGPEYGLKIKSAPGQGTEVSLSFPKR 560 >UniRef50_UPI0001C42EFA two-component sensor histidine kinase n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42EFA Length = 582 Score = 305 bits (782), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 189/584 (32%), Positives = 324/584 (55%), Gaps = 40/584 (6%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 ++ +LL + +R +++ F + R R R ++ + S + L +F LF + T++G Sbjct: 1 MWELLLVMLERLGIIVTVAFLVTRFRFVRNIIEEKNVSSIQRLHFILMFGLFGIIGTYTG 60 Query: 64 VPV---EG-------------SLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIG 107 + + EG ++ N R+I ++ G+L G VGI G+IAGIHRY +G Sbjct: 61 LTINAEEGVYTRWTLSLTDDEAIANARVIGIVVAGLLGGWKVGIGAGLIAGIHRY--TLG 118 Query: 108 GVTAIPCFITSILAGCISGWINLKIPKAQ--RWRVGILGGMLCETLTMILVIVWAPTTAL 165 G +A+ C I+++LAG I+G+ K + W+ +L GML E + M+++++ A + Sbjct: 119 GFSALACAISTVLAGLIAGYFYKKYRNHRMVSWKNALLIGMLAEAVQMLIILLIAKPFSA 178 Query: 166 GIDIVSKIGIPMILGS-VCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-V 223 +VS IG+PMI+ + + +L++++V E+E QA+ + +AN+TL R + Sbjct: 179 AWALVSSIGVPMIIANGIGTAIFILIIRNVINEEERMGKLQAERSFKLANQTLKYMRKGL 238 Query: 224 NSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKI 283 N S + C I+ +I+ AV+ITN VLAYVG E N + + T++ + G+ Sbjct: 239 NESSAKAACHILFKEINVAAVSITNHQTVLAYVG--EENGNEKQEIKTKATKEVLKTGEW 296 Query: 284 IIKNNDEAH----RTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQI 339 + + + R P HS ++ PL + GTLK+Y+ + T + E+A GL+++ Sbjct: 297 KLADARDMEGLNVREPH-HSAIIAPLIQNEKPVGTLKLYFKSEKERTPTTIELAKGLAEL 355 Query: 340 ISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLS 399 +S QL+++ A+ ++A +AE+ AL++++NPHFLFNALN I S IR +P+ AR+L+ +LS Sbjct: 356 LSQQLQLAYADDQLKLAKQAEINALEAQVNPHFLFNALNTIVSLIRTDPNKARKLLISLS 415 Query: 400 RYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDI-DEEVNCCIPSLLIQ 458 ++ R N+ ++ IK+EL +K Y+ IEQARF D+L V Y++ D + +P + +Q Sbjct: 416 KFFRQNLTGIHAKEATIKEELNHVKAYLQIEQARFSDRLEVYYEVSDSLMYVTVPPMTLQ 475 Query: 459 PLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMP---- 514 PLVENA+ HG++ G + I V + + V I V D+G GI + + E P Sbjct: 476 PLVENAMKHGLKDKVGHCTLVIRVYQHEHFVCIDVEDSGVGISEQ--RQKELFTQPVQSE 533 Query: 515 -GNKIGLLNVHHRVKLLYGEGLHIR---RLEPGTEIAFYIPNQR 554 G IGL N+ R++++YG I+ +E G I +R Sbjct: 534 VGTGIGLYNMKRRLEMMYGSHFEIKVKSEVEQGATFTLCINQER 577 >UniRef50_C0ZI45 Two-component sensor histidine kinase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZI45_BREBN Length = 575 Score = 304 bits (778), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 187/541 (34%), Positives = 306/541 (56%), Gaps = 18/541 (3%) Query: 7 MLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPV 66 +++ + +R A++++ R+R FR +L++ A ++ L V IFS ++ T++G+ Sbjct: 5 LMVPLTERTAVLIVMALLFTRVRAFRSILNQQATWREKALMVV-IFSAISILGTYNGIWY 63 Query: 67 EGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISG 126 + ++ N R+I + G+L GPWVG++TG+IAGIHRY +GG T + C I++I G +G Sbjct: 64 QDAIANSRVIGTVVAGLLAGPWVGLMTGLIAGIHRY--SLGGFTDLACAISTISEGLFAG 121 Query: 127 WINLKIPKAQR---WRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPM-ILGSV 182 I + + W + G L E L M +V++ A A + +V I +PM ++ SV Sbjct: 122 LIYQFLRNRSKKIGWTTALFVGFLAEWLQMGIVLLIARPYADALALVQAISVPMSVVNSV 181 Query: 183 CIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VNSESLRKVCEIIRDDIHA 241 I +++++ + E++ A QA+ L +A+KTL R + +S +KV E I Sbjct: 182 GIAILIIIIDLAKKEEDRIGALQAQRTLQVADKTLSYLRQGLTYDSAQKVAEEILRTTRV 241 Query: 242 DAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPE----I 297 AVAIT+T VLA+VG G ++ G+ + TR+ ++ ++ I E E + Sbjct: 242 AAVAITDTRSVLAHVGAGSSHHVVGEGITTKATREVLSTKEVKIAQTKEEIGCRETNCPL 301 Query: 298 HSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMAN 357 +++PL + V G LK+Y + ++++ E+ GL +IS+QLE++ E+ + Sbjct: 302 RYAILVPLMRRREVAGVLKLYQDRSRKLSAVDLELVRGLGNLISSQLELAELEKQSRLLA 361 Query: 358 KAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIK 417 AE+RAL ++INPHFLFNALN I S IR P+ AR+L+ +L Y R N+ + + Sbjct: 362 DAEIRALHAQINPHFLFNALNTIVSFIRFRPEQARELLIHLGEYFRRNLH-DSGGYVSLA 420 Query: 418 KELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKG 476 +EL I+ Y+AIE+ARFGDKL V YDI++ V +P L++QPLVENA+ HG+ P + G Sbjct: 421 RELEHIEAYLAIERARFGDKLHVEYDIEDGVERFTVPGLILQPLVENAVKHGLLPKREGG 480 Query: 477 VVTISVAECGNR-VRIAVRDTGHGIDPKVIERVEANEMPGNK---IGLLNVHHRVKLLYG 532 V I + V + V D G G++ ER + G + IGL NV R++ +YG Sbjct: 481 TVVIRACRKEKQIVELTVADNGVGMEVDPSERAPDEKRAGRQLSGIGLANVKSRLQSIYG 540 Query: 533 E 533 E Sbjct: 541 E 541 >UniRef50_A1HSX0 Signal transduction histidine kinase, LytS n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSX0_9FIRM Length = 636 Score = 303 bits (775), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 199/563 (35%), Positives = 316/563 (56%), Gaps = 23/563 (4%) Query: 5 FNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGV 64 F ++L + AL+ + F+ R R + +P+ L +T IFS+ ++ T++GV Sbjct: 75 FELVLELMGDMALLAMAANFIGRNRYIASCAERPT-TPRSWLTLTVIFSVLSILGTYTGV 133 Query: 65 PVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCI 124 PVEG+L N R++ + GGI+ GPWVG+ G I+G+HRYLI GG TA C ++L G + Sbjct: 134 PVEGALANTRLVGTLMGGIMGGPWVGLGIGFISGLHRYLI--GGFTAEICGAATLLGGLM 191 Query: 125 SGWINLKIP-KAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPM----IL 179 +G K W+ L + E L +V++ A + I +P +L Sbjct: 192 AGMARQKYGLHGINWKKAALLALAAEGLQKGMVLLLAKPFEAAWALEKAIAVPTTVVTML 251 Query: 180 GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VNSESLRKVCEIIRDD 238 G+V +L+++ ++ E+E A+ A+L+L+IA++TLP RH + ES +K EII Sbjct: 252 GTVVF---MLILKDIKTEQELHGAKAAQLSLEIASRTLPFLRHGLTMESAQKTAEIIFAF 308 Query: 239 IHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTP--- 295 DAV+I+N + VLA+VG G +++ G+ ++ +T+Q + G + I + + P Sbjct: 309 TGMDAVSISNREQVLAFVGKGADHHKPGEPIMTQSTKQTLISGMLHIVHTAQEQGCPVAG 368 Query: 296 -EIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLRE 354 + S +V PL G V GT+K+ + IT MA G++ ++S Q+E++ + R+ Sbjct: 369 CPLQSSVVAPLVVNGAVIGTVKLNRTVPNGITEVDIRMAEGIAHLLSVQIELAEIDCQRK 428 Query: 355 MANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQI 414 M KAEL+ALQ++INPHFLFN +N I S R NPDTAR L+ +L+ LR++ + D + Sbjct: 429 MREKAELKALQAQINPHFLFNTINIIMSFCRTNPDTARSLLGHLATMLRHSFADRQDF-V 487 Query: 415 DIKKELYQIKDYIAIEQARFGDKLTVIYDIDE-EVNCCIPSLLIQPLVENAIVHGIQPCK 473 +K+E+ I Y+ I +ARFG +LTV +ID + IP L +QPLVENA+ HG+ P Sbjct: 488 TLKEEMEGIAAYLEIVKARFGSRLTVKTEIDPILLEAPIPLLTLQPLVENAVQHGLFPKL 547 Query: 474 GKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGE 533 V+TI+ + I VRD G GI + + + A + G IG+ NV+ R+ +YG+ Sbjct: 548 SHCVLTIAAGLRDGAMVIEVRDNGVGIPVEKLRTILAGQ--GQGIGIRNVYKRLTGIYGK 605 Query: 534 --GLHIRR-LEPGTEIAFYIPNQ 553 GL I L GT + IP + Sbjct: 606 EYGLAIESTLGQGTTVRIVIPYE 628 >UniRef50_B8CWX8 Signal transduction histidine kinase, LytS n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWX8_HALOH Length = 578 Score = 303 bits (775), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 180/544 (33%), Positives = 310/544 (56%), Gaps = 18/544 (3%) Query: 23 FFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPVEGSLVNVRIIAVMSGG 82 + L RLF+ + + S KE + + F L + T+ + + + N+R I + G Sbjct: 26 YILSMTRLFKRFFY-APLSRKEKIFLVIFFGLLSASGTYLSIYIMDAYANIRAIGAVVAG 84 Query: 83 ILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISGWINLKIPKAQ-RWRVG 141 L GP +G++ G + GIHR+ +GG TA+ C I ++ +G I G + Q + Sbjct: 85 FLGGPLIGVLVGTVGGIHRF--TLGGFTALACAIGTMTSGLIGGLFHKSFKNQQINSKNS 142 Query: 142 ILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILGSVC-IGFIVLLVQSVEGEKEA 200 G + + M++VI+++ L + +VS I +PMI+ + I V ++ +VE E E Sbjct: 143 FYIGAVALIIEMVIVIIFSRPIELALQLVSVISLPMIIANAAGISLFVSILNNVEKENEN 202 Query: 201 SAARQAKLALDIANKTLPLFRH--VNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGV 258 A+QA+L LDIAN+T+ FR + +++K EII A AVAIT+ + ++A+ G Sbjct: 203 IKAKQARLTLDIANQTINYFREGLAHGRAVKKASEIILQKTGASAVAITDREKIIAFAGK 262 Query: 259 GEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTP----EIHSMLVIPLWEKGVVTGT 314 G ++ G+ F++ TRQ +N GK+ + + P + S++V PL G V G+ Sbjct: 263 GSDHHFPGEPFLTSVTRQTINEGKVSVAKTKKEVGCPVENCPLESVVVAPLKWDGRVMGS 322 Query: 315 LKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLF 374 LK+Y+ +++ +A G+S ++STQ+++SR + ++ +AEL+ALQ+++NPHFLF Sbjct: 323 LKLYHTE-RKLSKVDISLAEGISTLLSTQIQLSRLSEQAKLKTEAELKALQAQVNPHFLF 381 Query: 375 NALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARF 434 N+LN I+S R +P+ AR+L+ LS + R + K + + ++ E+ +++Y +E+ARF Sbjct: 382 NSLNTIASFTRTDPEKARELLLRLSDFFRTTLS-KGHDLVSLETEIKSVRNYFFLEKARF 440 Query: 435 GDKLTVIYDI-DEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAV 493 G++L ++ +I DE ++ IPS +QPL+ENA+ HGI P KG + +SV + + + V Sbjct: 441 GERLELVINIPDEYMSVMIPSFTLQPLIENAVKHGIFPKNRKGKIDLSVRSNEDIIELIV 500 Query: 494 RDTGHGIDPKVIERV-EANEMPGNKIGLLNVHHRVKLLYGE--GLHIRRLE-PGTEIAFY 549 RD G GI + ++ V + G+ IGL NV R+K ++G GL + E GTE+ Sbjct: 501 RDNGVGIPEEELKMVLKEGYGKGSGIGLSNVMARIKNIFGPEYGLTMESEENTGTEVVIK 560 Query: 550 IPNQ 553 +P Q Sbjct: 561 VPLQ 564 >UniRef50_Q814J0 Sensor protein lytS n=83 Tax=Bacillaceae RepID=LYTS_BACCR Length = 589 Score = 296 bits (759), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 201/582 (34%), Positives = 325/582 (55%), Gaps = 38/582 (6%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 + N++L + +R L++I F L I+ FR LLHK +L + IFS+F + S ++G Sbjct: 1 MLNLVLMMIERVGLIVILGFLLSHIKTFRRLLHKQDGYVDKL-KLICIFSVFTIVSNYTG 59 Query: 64 VPVEG----------------SLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIG 107 + + G ++ N RI+ V G+L GP VGI G IAGIHRY++ G Sbjct: 60 IEIAGNTIMNENWLQGVSSSSTIANTRIMGVGISGLLGGPIVGIGVGSIAGIHRYML--G 117 Query: 108 GVTAIPCFITSILAGCISGWINLKIPKAQRW---RVGILGGMLCETLTMILVIVWAPTTA 164 G TA+ C I+SILAG I+G+I K R + + + +L MI++++ Sbjct: 118 GTTALSCAISSILAGVITGYIGYIFKKYNRTITPKFSAILSVFIVSLEMIMILLIVED-- 175 Query: 165 LGIDIVSKIGIPMILGSVCIGFIVL-LVQSVEGEKEASAARQAKLALDIANKTLPLFRH- 222 G+ IV I IPMIL + FI+L ++Q++ ++E + A Q L IA+KTLP FR Sbjct: 176 -GMSIVKTIAIPMILVNSFGSFILLSMIQAILRQEENAKALQTHKVLRIADKTLPYFRQG 234 Query: 223 VNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGK 282 + ES + V +II DAV++T+T+ +LA+VG+ ++ I+ +++ ++ G+ Sbjct: 235 LTEESCKHVAQIIHRFPGTDAVSLTDTEKILAHVGLASDHHIPSHSLITGLSKEVLHTGQ 294 Query: 283 IIIKNNDEA----HRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQ 338 I+ + E H + + +VIPL G GTLK+Y+ + +Q++ +E+A GL++ Sbjct: 295 IMKAKSREVINCQHEGCPLQAAIVIPLTSHGNTIGTLKLYFKNPNQLSRVEEELAEGLAK 354 Query: 339 IISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNL 398 I STQLE+ AE ++ AE++ALQ++INPHFLFNA+N +S+ R + + AR+L+ L Sbjct: 355 IFSTQLELGEAELQSKLLQDAEIKALQAQINPHFLFNAINTVSALCRTDVEKARKLLLQL 414 Query: 399 SRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTV-IYDIDEEVNCCIPSLLI 457 S Y R N++ I +++EL ++ Y+++EQARF +K V +Y DE +P ++ Sbjct: 415 SVYFRCNLQGARQLLIPLEQELNHVQAYLSLEQARFPNKYEVKMYIEDELKTTLVPPFVL 474 Query: 458 QPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIE---RVEANEMP 514 Q LVENA+ H + V + V E V V+D G GI+ + +E ++ + Sbjct: 475 QLLVENALRHAFPKKQPVCEVEVHVFEKEGMVHFEVKDNGQGIEEERLEQLGKMVVSSKK 534 Query: 515 GNKIGLLNVHHRVKLLYGEG--LHIR-RLEPGTEIAFYIPNQ 553 G L N++ R+ L+G+ LHI L GTEI F IP + Sbjct: 535 GTGTALYNINERLIGLFGKETMLHIESELNEGTEITFVIPKK 576 >UniRef50_A1VG05 Signal transduction histidine kinase, LytS n=4 Tax=Desulfovibrio RepID=A1VG05_DESVV Length = 580 Score = 296 bits (757), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 187/560 (33%), Positives = 302/560 (53%), Gaps = 17/560 (3%) Query: 7 MLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPV 66 M + + +R L+L F ++ + +L S + + +FSLF + T++G V Sbjct: 10 MFITLSERFGLLLAGGFAIMTLAPLDKLGPGRTRSWRATALLVVLFSLFTILGTYNGNIV 69 Query: 67 EGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISG 126 S N+R + ++ G+ GP VG +TG+IAG HRY ID+GG +A+PC + + L G +G Sbjct: 70 FQSFANLRAMGAVTAGLFGGPVVGALTGLIAGGHRYFIDVGGFSAVPCGLATFLEGLAAG 129 Query: 127 WINLKIP-KAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL-GSVCI 184 + P ++ W + + E + M LV+ A A +D+V IG+PMIL V Sbjct: 130 LFAWRFPSRSLDWGTAMTFAAVGEAVHMCLVLGLARPYAQAVDLVEVIGLPMILLNGVGA 189 Query: 185 GFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VNSESLRKVCEIIRDDIHADA 243 V ++ ++ + QA+ L IAN+TLP R +++ S R EII D+ A Sbjct: 190 AIFVQALRMQMHFRDLRDSSQARQILSIANRTLPHLRAGLSAASARATAEIILDETRVAA 249 Query: 244 VAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYG-KIIIKNNDEAHRTPE---IHS 299 VA+T+ D V+A+VG +++ G + TR+ G + + +DE E + S Sbjct: 250 VALTSNDMVMAHVGAASDHHRAGHSVCTQATRRVATDGIPLFVTGHDEIGCQLEACPLCS 309 Query: 300 MLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKA 359 +++PL + + G LK+Y + +L E+A GL+ + +TQ+E+ ++ +A Sbjct: 310 AIIVPLRKGDTILGCLKLYGTKDRPLDQTLFELAKGLADLFATQIELEDIGIKNQLLARA 369 Query: 360 ELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKE 419 E+R LQ++INPHFLFN+LN ++S R P AR+LI +L+RY+R N++ E I + +E Sbjct: 370 EIRRLQAQINPHFLFNSLNTVASFCRTAPGQARELILDLARYMRRNLD-TSREAIHLAEE 428 Query: 420 LYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVV 478 QI+ Y+ IE+ARFG+++ + DID E +C +P LLIQPLVEN++ HGI + GVV Sbjct: 429 AEQIRAYLVIEKARFGERIRAVIDIDPETEHCLVPPLLIQPLVENSVRHGILGNEEGGVV 488 Query: 479 TISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMP----GNKIGLLNVHHRVKLLYGEG 534 ++ + V + V D G G+ P+ + N P G IG N + R+ LYG Sbjct: 489 RLATSMEDGHVVVVVEDDGAGM-PESTRQGILNGTPVTAHGEGIGASNCNQRLVQLYGPA 547 Query: 535 LHIR-RLEP--GTEIAFYIP 551 + P GT I F +P Sbjct: 548 YALSIDSAPGMGTRITFRVP 567 >UniRef50_C5ETQ5 Signal transduction histidine kinase n=5 Tax=Clostridiales RepID=C5ETQ5_9FIRM Length = 565 Score = 291 bits (745), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 184/543 (33%), Positives = 291/543 (53%), Gaps = 26/543 (4%) Query: 25 LIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPVEGSLVNVRIIAVMSGGIL 84 L +I + R +L + A+ IF L ++ ST++G+ +G++VN R+I V++ G+L Sbjct: 23 LTKIPVVRSMLLGENNPIGSRAALAVIFGLVSIVSTYTGMRAQGAIVNTRVIGVLAAGLL 82 Query: 85 FGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISGWINLKIPKAQRWRVGI-L 143 GP+VG+ +I G+HRYL DIGG TA+ C I++ + G I + + + GI L Sbjct: 83 GGPYVGMGAAIIGGLHRYLFDIGGFTAVSCAISTFVEGLIGSAFSRRFKAGKIDNTGIFL 142 Query: 144 GGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMI----LGSVC-IGFIVLLVQSVEGEK 198 L E M++++ + +++V I PMI LG V IG ++ E+ Sbjct: 143 ITALAEVCQMVIILFISKPFPAALELVGLIAFPMITMNALGMVAFIGTFSIVFM----EE 198 Query: 199 EASAARQAKLALDIANKTLPLFRH--VNSESLRKVCEIIRDDIHADAVAITNTDHVLAYV 256 ++ A + +LAL I ++LP R ++ + EII + AV IT+T VLA Sbjct: 199 DSQFAEKMRLALGIVEQSLPHLRKGLYSTRDMEAAAEIIYNSTSCAAVMITDTQKVLAMK 258 Query: 257 GVGEHNYQNGDDFISPT-----TRQAMNYGKIIIKNNDEAHRTPEIHSMLVIPLWEKGVV 311 G +N G + P R+ + + D + + H ++ PL E Sbjct: 259 GEARYNDLKGGALLKPILESIHDRKTTTF--TCAEKPDPLYHILKNHIIVTAPLIEMDKP 316 Query: 312 TGTLKIYYCHAHQITSSLQ-EMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINP 370 G+L + H +TS A L+++ STQLE+S + +++ KAE +ALQS++NP Sbjct: 317 IGSLTM-VVRKHWVTSQPNLNFASELARLFSTQLELSDLDYQKQLRRKAEFKALQSQVNP 375 Query: 371 HFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIE 430 HFL+NALN IS R NPD AR+LI LS Y R +E D +++ ELY + Y+ +E Sbjct: 376 HFLYNALNTISCVCRENPDRARELILTLSAYYRQTLE-NDQYMLNLHTELYHVSSYLELE 434 Query: 431 QARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVR 490 QARF +KL V D+++++NC +PS ++QPLVENA+ +G +G V+I + V Sbjct: 435 QARFEEKLQVDMDVEDDLNCLVPSFILQPLVENAVRYGAD-ARGMRTVSIQARTIDDSVE 493 Query: 491 IAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGE--GLHIRRLEPGTEIAF 548 I+V D G GI +I ++ + E G +GL NVH R+K +YGE GL I G+ + F Sbjct: 494 ISVSDKGPGIPKDIIIQMYSGEGRGG-VGLKNVHRRLKSIYGEDNGLKIETSSAGSRVWF 552 Query: 549 YIP 551 +P Sbjct: 553 RVP 555 >UniRef50_C0Z808 Two-component sensor histidine kinase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z808_BREBN Length = 571 Score = 281 bits (720), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 180/556 (32%), Positives = 317/556 (57%), Gaps = 19/556 (3%) Query: 7 MLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPV 66 MLL + + +++ + + ++ FR +++ ++ ++ ++ +F ++ T +G+ V Sbjct: 5 MLLGLLEDISVIAVIALIIGQLDYFRNIMY-GKNNWMRIVILSTLFGFLSVIGTENGLRV 63 Query: 67 EGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISG 126 +L N RI+ ++GG++ GP VG + G+I GIHRY IGG TA C I++++ G ++G Sbjct: 64 NDALANTRIVGAVAGGLIGGPVVGFLAGLIGGIHRY--SIGGFTAFACAISTVMNGYLAG 121 Query: 127 WINLKIPKAQ-RWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILGSVCIG 185 ++ K+ + +W+ +L G+ E + ++V++ A + +++ KI IP + ++ G Sbjct: 122 IVSTKMNMLRLKWQHIVLIGVTAELIQKVMVLLMAKPFSAALELEVKIAIPTTIMTIA-G 180 Query: 186 FIVL--LVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VNSESLRKVCEIIRDDIHAD 242 ++ + Q+++ ++ S A A LAL IA++TLP R +N S +K E+IR+ D Sbjct: 181 LLLFTRVFQNLKMMQDQSGALGANLALSIASQTLPHLRTGLNEYSAKKTAELIREMAKVD 240 Query: 243 AVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEA-HRTPEIHSML 301 AVAIT+ + +L+ G N+ + + +N+ I + D A P + S+ Sbjct: 241 AVAITDREKLLSAKGHELENHLQKETLCAQVAEAVLNHPTGIWCDKDFALPHPPRLKSIN 300 Query: 302 VIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAV-GLSQIISTQLEVSRAEQLREMANKAE 360 L+ + GTL+ YY + TS E V GL++++S Q+E++ E +M +AE Sbjct: 301 AASLYHQNQKIGTLQFYYKTSSSKTSQTNEKLVDGLAKLLSVQIELAEIEHQAKMRKQAE 360 Query: 361 LRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKEL 420 + ALQ++INPHFLFN L I S R +PD AR LI +LS R N++ K + +++EL Sbjct: 361 VSALQAQINPHFLFNTLGTIMSYCRTDPDQARNLIGHLSDIFRRNLKSKGNHH-SLQEEL 419 Query: 421 YQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVT 479 IK Y+ IE+ RF ++L V +IDE + C +P L +QP+VENAI HG+ P ++T Sbjct: 420 DGIKSYLEIEKVRFSNRLKVNMEIDETLLECKLPVLTLQPIVENAIHHGLSPKVSDCLLT 479 Query: 480 ISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGE--GLHI 537 I V + V+I++ D G GI + + + ++ G IGL+NVH R++ +YG+ GL I Sbjct: 480 IRVEPYDHEVKISIEDNGVGISEERLAEIWNSQSKG--IGLINVHSRLQSIYGKKYGLTI 537 Query: 538 RRLEP--GTEIAFYIP 551 + +P GT ++F P Sbjct: 538 QS-QPGLGTVVSFVAP 552 >UniRef50_Q4A009 Sensor protein lytS n=84 Tax=Bacilli RepID=LYTS_STAS1 Length = 591 Score = 281 bits (720), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 173/584 (29%), Positives = 312/584 (53%), Gaps = 44/584 (7%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 + N+ + + +R L+++ + L+ I F+ ++++ + + IF F++ S ++G Sbjct: 1 MLNLFILLLERVGLIILIAYILMNINHFKTMMNEREKRRSQWQLII-IFGCFSMISNFTG 59 Query: 64 VPVEG----------------SLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIG 107 + + G SL N R++ + G++ GP+V + VI+G++R + IG Sbjct: 60 IQIRGDEIINGTVYNHLDPDASLANTRVLTIGVSGLIGGPFVALAVAVISGMYR--VYIG 117 Query: 108 GVTAIPCFITSILAGCISGWINLKIPKAQRWRVGILG---GMLCETLTMILVIVWAPTTA 164 G A I+SI ISG+ K +A R+ + G G E + M+ +++++ T Sbjct: 118 GADAYIYLISSIFIALISGYFGYKAMRANRYPTIVKGACIGGTTEIIQMLCILLFSDNTE 177 Query: 165 LGIDIVSKIGIPMI-LGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH- 222 +V I IPMI + S+ + ++ S ++E + A Q L +AN+TLP FR Sbjct: 178 HAWTLVKLIAIPMISINSIGTAIFLSIILSTIKQEEETRAIQTHDVLQLANQTLPYFRSG 237 Query: 223 VNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGK 282 +N +S +K EII + + AVAITN +L +VGV ++ I+ +++A+ G Sbjct: 238 LNEQSAKKAAEIILNLMRVSAVAITNRKDILTHVGVASDHHVAQKAIITNLSKRAIQSGT 297 Query: 283 IIIKNNDEAHRTPEI---------HSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMA 333 + EA+ + EI + +V+PL K V GTLK+Y+ + + + S +++A Sbjct: 298 L-----KEAYSSEEIGCNHPGCPLEAAIVVPLRVKNDVVGTLKLYFTNKYDVNYSDKQLA 352 Query: 334 VGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQ 393 GL++I S+QLE+ +AE + AE+++LQ+++NPHF FNA+N IS+ IR++ + AR+ Sbjct: 353 TGLAEIFSSQLELGQAETQSALIRDAEIKSLQAQVNPHFFFNAINTISALIRIDSEKARE 412 Query: 394 LIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCI 452 L+ LS++ R N++ + I ++KEL Q++ Y+++EQAR+ D+ V +DID + Sbjct: 413 LLLQLSQFFRSNLQGARNNTISLEKELQQVESYLSLEQARYPDRFNVSFDIDRTCYGALV 472 Query: 453 PSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV---E 509 P IQ LVENAI H + K + + + + I+V D GHGI + ++++ Sbjct: 473 PPFAIQILVENAIKHAFKNRKYNNEIIVKAHKAQTGLVISVSDNGHGIPYEKLDKIGKTS 532 Query: 510 ANEMPGNKIGLLNVHHRVKLLYG--EGLHIRRLEPGTEIAFYIP 551 + G L N++ R+ L+G L I GT+++ IP Sbjct: 533 VHSESGTGSALENLNRRLDGLFGYEASLQIHSDHQGTQVSCTIP 576 >UniRef50_C5TXS9 Signal transduction histidine kinase, LytS n=2 Tax=Desulfovibrio RepID=C5TXS9_DESVU Length = 627 Score = 277 bits (709), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 162/471 (34%), Positives = 266/471 (56%), Gaps = 9/471 (1%) Query: 7 MLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPV 66 M + + +R L+L F ++ + +L S + + +FSLF + T++G V Sbjct: 10 MFITLSERFGLLLAGGFAIMTLAPLDKLGPGRTRSWRATALLVVLFSLFTILGTYNGNIV 69 Query: 67 EGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISG 126 S N+R + ++ G+ GP VG +TG+IAG HRY ID+GG +A+PC + + L G +G Sbjct: 70 FQSFANLRAMGAVTAGLFGGPMVGALTGLIAGGHRYFIDVGGFSAVPCGLATFLEGLAAG 129 Query: 127 WINLKIP-KAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL-GSVCI 184 + P ++ W + + E + M LV+ A A +D+V IG+PMIL V Sbjct: 130 LFAWRFPSRSLDWGTAMTFAAVGEAVHMCLVLGLARPYAQAVDLVEVIGLPMILLNGVGA 189 Query: 185 GFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VNSESLRKVCEIIRDDIHADA 243 V ++ ++ + QA+ L IAN+TLP R +++ S R EII D+ A Sbjct: 190 AIFVQALRMQMHFRDLRDSSQARQILSIANRTLPHLRAGLSAASARATAEIILDETRVAA 249 Query: 244 VAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYG-KIIIKNNDEAHRTPE---IHS 299 VA+T+ D V+A+VG +++ G + TR+ G + + +DE E + S Sbjct: 250 VALTSNDMVMAHVGAASDHHRAGHSVCTQATRRVATDGIPLFVTGHDEIGCQLEACPLCS 309 Query: 300 MLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKA 359 +++PL + + G LK+Y + +L E+A GL+ + +TQ+E+ ++ +A Sbjct: 310 AIIVPLRKGDTILGCLKLYGTKDRPLDQTLFELAKGLADLFATQIELEDIGIKNQLLARA 369 Query: 360 ELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKE 419 E+R LQ++INPHFLFN+LN ++S R P AR+LI +L+RY+R N++ E I + +E Sbjct: 370 EIRRLQAQINPHFLFNSLNTVASFCRTAPGQARELILDLARYMRRNLD-TSREAIHLAEE 428 Query: 420 LYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGI 469 + QI+ Y+ IE+ARFG+++ + DID E +C +P LLIQPLVEN++ HGI Sbjct: 429 VEQIRAYLVIEKARFGERIRAVIDIDPETEHCLVPPLLIQPLVENSVRHGI 479 >UniRef50_A5VJZ2 Signal transduction histidine kinase, LytS n=13 Tax=Lactobacillaceae RepID=A5VJZ2_LACRD Length = 587 Score = 274 bits (700), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 179/586 (30%), Positives = 307/586 (52%), Gaps = 45/586 (7%) Query: 13 DRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPVEG---- 68 +R L++I F L+ + LFR LL S K + +T +FS+FA+ + +G+ ++ Sbjct: 10 ERVGLIIILAFLLVSVPLFRRLLFNQTISAK--IQLTILFSIFAIMANMTGIEIDANNQL 67 Query: 69 -------------SLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYL--IDIGGVTAIP 113 S+VN RI+ V GI+ GPWVG + G++AG+HR + + G +P Sbjct: 68 HNKIILTAISTNDSIVNARILGVSVAGIIGGPWVGSLVGLVAGVHRIIQGAPLQGWFYVP 127 Query: 114 CFITSILAGCISGWINLKIPKAQRWRV-----GILGGMLCETLTMILVIVWAPTTALGID 168 +S+L G +SG+ L + ++V G + G+L E++ M+ +++++PT G Sbjct: 128 ---SSVLIGALSGF--LYHDRKSYFKVMTPWHGFIVGILMESIQMLFILLFSPT---GWA 179 Query: 169 IVSKIGIPMIL-GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VNSE 226 +V I +PMIL S+ + ++ ++E A Q L + N+TLP FR +N Sbjct: 180 LVKYIALPMILVNSLGTSIFLSIISMYLHQEEELRAMQTHSVLQLTNETLPYFRQGLNKS 239 Query: 227 SLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIK 286 S ++V +II+ + DAV+IT+ +LA++G G+ ++ G+ + + + G+I I Sbjct: 240 SAQQVVKIIKKYTNFDAVSITDRQRILAHIGAGDDHHIPGNRLETSLSSNVIKTGQIKIA 299 Query: 287 NNDEA----HRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIIST 342 NN + + + +V PL V GTLK+YY +T ++A+GL +I + Sbjct: 300 NNSKMIGCIDPNCPLEAAIVAPLRIGNEVIGTLKMYYTDQWHLTPVEIQLAIGLCEIFAN 359 Query: 343 QLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYL 402 Q+ + AE ++ A+++ALQ++INPHF FNA+N IS+ +R + + AR+L+ LS Y Sbjct: 360 QIALGEAEVQAQLVRDAKIKALQAQINPHFFFNAINTISAILRRDQEKARELLLQLSNYF 419 Query: 403 RYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVE 462 R N+ + +I + +E Q+ Y+ +EQ RF K + +D E + +P IQ LVE Sbjct: 420 RANLIGARETEITLGQERSQVDAYLELEQTRFPQKYNITFDQQVENDVYLPPFTIQVLVE 479 Query: 463 NAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNK---IG 519 NA+ H K V I++ + G R+ I V D G GI P+++ ++ + +K Sbjct: 480 NALKHAFGARKDHNNVQITIKQLGARLAIQVADNGEGIAPELLPKLGKEPLTSSKGSGNA 539 Query: 520 LLNVHHRVKLLYGE--GLHIRRLEPGTEIAFYIPNQRTPVASQATL 563 L N++ R+ LY E L I GT+I +P A +L Sbjct: 540 LYNLNQRLIGLYDERSALQITSSNKGTKIKISLPYHTKEGADNESL 585 >UniRef50_A4J8Q8 Signal transduction histidine kinase, LytS n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J8Q8_DESRM Length = 568 Score = 270 bits (690), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 195/567 (34%), Positives = 310/567 (54%), Gaps = 32/567 (5%) Query: 13 DRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPV------ 66 R ++ F R + FR LL + K L + IF +F + T++G+ V Sbjct: 3 QRMGFIVAIAFLFTRWQGFRSLLENRP-TLKGKLYLGVIFGIFGIIGTYTGITVTPREVQ 61 Query: 67 ---------EGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFIT 117 E ++ N R I VM GG+L GP G++ G+IAG+HR + +GG T + C I+ Sbjct: 62 NLFPGTLAYEDAIANSRAIGVMVGGLLGGPLTGLLAGLIAGVHR--MSMGGFTDMACGIS 119 Query: 118 SILAGCISGWINLKIP-KAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIP 176 ++ G ++G I K+ K V ++ G+ E M ++++ A + +V I +P Sbjct: 120 TVYEGLLAGVIYYKMKQKTLTPGVALMTGLAGEIGQMAIILMVAQPFYKALALVKIIAMP 179 Query: 177 MILG-SVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VNSESLRKVCEI 234 MIL S+ I + +VQ+V + A QA+ AL IA+KTL R +N ES +I Sbjct: 180 MILANSLGIALFIAIVQTVVENERTIGAIQAQRALAIADKTLAHLRKGLNHESALATAQI 239 Query: 235 IRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRT 294 I ++ A AVAITN + +LA+VG G ++ G ++ TR+ + +G++ I + + Sbjct: 240 IYEESCAGAVAITNQEMILAHVGEGSDHHHPGAPILTKVTREVLQHGQLAIAASPQEILC 299 Query: 295 PEIH----SMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAE 350 +H S +V+PL+ + GTLK+Y Q+ + E+A GL+Q+ STQLE+ AE Sbjct: 300 TNVHCALQSAVVVPLYNGKGIVGTLKLYSVRRQQLDRLMVELARGLAQLFSTQLELGEAE 359 Query: 351 QLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKD 410 + + AE++ALQ++INPHFLFNALN + S IR PD AR ++ +L Y+R N++ Sbjct: 360 KQARLVQDAEIKALQAQINPHFLFNALNTVVSLIRTKPDEARSVLIHLGTYIRQNLKSSL 419 Query: 411 DEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGI 469 ++ +++ EL ++ Y+A+ QARF +L V +I ++ IP L +QPLVENA+ HG Sbjct: 420 NKWTNLETELKHVEAYLAVVQARFSHRLRVEMNIPLTLHGVVIPPLTLQPLVENAVQHGF 479 Query: 470 QPCKGKGVVTISVAECGNRVRIAVRDTGHGID-PKVIERVEANEMPGNKIGLLNVHHRVK 528 + I + +VRI+V D G GI+ +V E ++A + IGL+NVH R+ Sbjct: 480 PRITENSSIIIEAVQQEKQVRISVTDNGVGIERDRVEELLKAEKRSDGGIGLINVHSRLI 539 Query: 529 LLYG--EGLHIRRLEP--GTEIAFYIP 551 ++G GL I EP GT + F IP Sbjct: 540 SIFGPQAGLSIHS-EPGAGTRVEFSIP 565 >UniRef50_Q5HLG3 Sensor protein lytS n=5 Tax=Staphylococcus epidermidis RepID=LYTS_STAEQ Length = 591 Score = 265 bits (676), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 166/579 (28%), Positives = 313/579 (54%), Gaps = 34/579 (5%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 + N+ + + +R L+++ + L+ I F+ ++ + + + IF +F++ S ++G Sbjct: 1 MLNLFILLLERVGLIILLAYILMNINHFKTMMSER-DKWRSKFQLIIIFGIFSMISNFTG 59 Query: 64 VPVE----------------GSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIG 107 + +E S+ N R++ + G++ GPWV II G+I+G+ R + IG Sbjct: 60 IEIENGHIVSGDIYYHLSKDASMANTRVLTIGVSGLIGGPWVAIIVGIISGLCR--LYIG 117 Query: 108 GVTAIPCFITSILAGCISGWINLKIPKAQRW---RVGILGGMLCETLTMILVIVWAPTTA 164 G A I+SI+ ISG+ + K + + G + G + E + M ++++ Sbjct: 118 GADAYTYLISSIVIAIISGYFGHQTIKQNTYPSIKKGAIIGAITEIIQMGCILLFTNNLH 177 Query: 165 LGIDIVSKIGIPMIL-GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH- 222 I +VS I +PMI+ S+ + ++ S ++E A Q L +AN+TLP FR Sbjct: 178 HAITLVSFIALPMIIINSLGTAIFLTIILSTIKQEEQMRAVQTHDVLQLANETLPYFRSG 237 Query: 223 VNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGK 282 +N +S ++ EII + AVAITN +L ++G G ++ + I+ +++ + GK Sbjct: 238 LNEKSAQQAAEIILKLMQVSAVAITNKKDILTHIGAGSDHHVARKEIITDLSKEVIQSGK 297 Query: 283 IIIKNNDEA----HRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQ 338 + + + E H + +V+PL+ V GTLK Y+ + I++S Q++A GL+ Sbjct: 298 LKVAHTREGIGCHHPNCPLEGAIVVPLYIHNEVAGTLKFYFTDNNIISTSDQQLAKGLAN 357 Query: 339 IISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNL 398 I S+QLE+ +AE ++ AE+++LQ+++NPHF FNA+N IS+ +R++ + AR+L+ L Sbjct: 358 IFSSQLELGQAEMQGQLLKDAEIKSLQAQVNPHFFFNAINTISALVRIDSEKARRLLIQL 417 Query: 399 SRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLI 457 S++ R N+ + I ++KEL Q+ Y+++EQAR+ ++ + Y ID++ + IP +I Sbjct: 418 SQFFRSNLNGARNNTITLQKELQQVAAYLSLEQARYPNRFNIHYRIDDQCQDALIPPFII 477 Query: 458 QPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNK 517 Q LVEN+I H + K + + V+ + + I+V+D G GI ++ + + Sbjct: 478 QILVENSIKHAFKNRKKNNHIDVDVSMKQDYLSISVQDNGQGIPADQLDTIGYTTVTSTT 537 Query: 518 I---GLLNVHHRVKLLYG--EGLHIRRLEPGTEIAFYIP 551 L+N++ R+ L+G L+I+ + GT ++ IP Sbjct: 538 GTGNALVNLNKRLTGLFGTTSALNIQSSQSGTTVSCLIP 576 >UniRef50_Q8EQQ2 Sensor protein lytS n=1 Tax=Oceanobacillus iheyensis RepID=LYTS_OCEIH Length = 585 Score = 262 bits (669), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 170/580 (29%), Positives = 314/580 (54%), Gaps = 35/580 (6%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 + + + +F R L+L+ F L RI FR LL K + K ++ + IF L ++ G Sbjct: 1 MIELTIVLFQRIGLLLLMAFILTRIPRFRSLLDKDI-TLKTVIYHSLIFGLISIIGAHVG 59 Query: 64 VPVEGS--LVNVRIIAVMSGGILFGPWVGII--------------TGVIAGIHRYLIDIG 107 V + G+ ++ II V +L G + ++ TG++AG+ Y+I +G Sbjct: 60 VVMIGNELIMQAWIINVAENEVLIGFSIVVVMIAGLLGGPFLGLGTGMVAGL--YIIFLG 117 Query: 108 GVTAIPCFITSILAGCISGWIN--LKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTAL 165 G + + + LAG ++GW + + G+ L M L+++ P + Sbjct: 118 GGGWVANSLINPLAGLLTGWAGQFFSDDRVMSPNKALFIGIFPPVLHMGLLLIMLPDQQI 177 Query: 166 GIDIVSKIGIPMIL-GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLF-RHV 223 G+ IV+ IGIP+++ S+ + ++++ E E AA + AL IA K LPL Sbjct: 178 GVQIVNTIGIPLVVTNSIALTIFTMMIRLALNETEQEAALETNRALTIAEKALPLLSEEP 237 Query: 224 NSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKI 283 + + RK+ +++ ++ A++ITN VL++VG+G+ ++Q G+ +++A+ G+I Sbjct: 238 GTMNARKMAKLLFKELDIAAISITNRTTVLSHVGLGDDHHQPGEPLKMRLSKKAVKDGRI 297 Query: 284 IIKNNDE----AHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQI 339 I + ++ + +++P++ G V G + +YY H+ QIT+ +A GL I Sbjct: 298 QIAYHQSDIQCGVENCKLKTAIMVPIYRSGEVIGLINLYYRHSQQITAVEITLAKGLGTI 357 Query: 340 ISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLS 399 IS Q+ AE+++++ +A++R LQ++INPHFLFN + I S +R++ + AR ++ LS Sbjct: 358 ISNQISGLEAEKMKKLLKEAKMRNLQAQINPHFLFNTFHLIHSLLRVDAEKARHILVQLS 417 Query: 400 RYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQ 458 +++R N+++ + + + KEL ++ Y+ I QARF D+++ +D+ ++ IP +Q Sbjct: 418 QFMRANLKIASESLVPLHKELEHLQAYLEIVQARFPDQISTSIHVDDYLLDIEIPPATLQ 477 Query: 459 PLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVI-----ERVEANEM 513 PLVEN+I HG+ KG++TI++ + N V I + D G G + K++ + + NE Sbjct: 478 PLVENSIQHGLSLSTSKGILTINITKTDNNVSIVLLDNGQGFEEKLLPILGKKPLHQNEN 537 Query: 514 PGNKIGLLNVHHRVKLLYGEG--LHIRRLEPGTEIAFYIP 551 GN I L N++ R+ L GE LHI+ + G+ + F +P Sbjct: 538 KGNGIALYNINQRLISLLGEDSQLHIQNTDKGSMVQFILP 577 >UniRef50_B1IFE5 Sensor histidine kinase n=13 Tax=Clostridium RepID=B1IFE5_CLOBK Length = 544 Score = 262 bits (669), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 173/557 (31%), Positives = 302/557 (54%), Gaps = 26/557 (4%) Query: 7 MLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPV 66 + + + + +L+ I + + + F + + + +L+ +T FS+ ++ T++GV + Sbjct: 2 IYIQLLESMSLIGIAAYLYSQTKTFNKFIKNKSDYKYKLIIIT-FFSVLSILGTYTGVNI 60 Query: 67 EG-SLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCIS 125 E +L N R I + G + GP VGI+ G+I G HRY + GG TA+ C I++IL G + Sbjct: 61 EPYALANARPIGAIVAGYIGGPLVGIMVGIIGGTHRYFL--GGFTALSCAISTILEGIVG 118 Query: 126 GWINLKIPKAQRWRV--GILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL-GSV 182 G N+ I K + V G+ ++ E L MI++++ A +++ I +PMI+ S+ Sbjct: 119 GIANV-ITKDEGLDVSTGVTAAIIAEVLQMIIILLIAKPYEAALELERVIALPMIITNSI 177 Query: 183 CIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VNSESLRKVCEIIRDDIHA 241 +G + ++ + + + A Q++ AL+IA KT R N E L KVC II + I+ Sbjct: 178 GVGIFINIINNTQEHYKKIGAIQSQKALNIAKKTSIYLRSGFNQEILDKVCSIIYESINL 237 Query: 242 DAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSML 301 ++ I + +Y G E + + +Y I ++N++ Sbjct: 238 KSIFIAENGGIFSYNG--EELNKEKLKYRVKEYFDFKDYKLIKFEDNNKQKL------FY 289 Query: 302 VIPLW-EKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAE 360 IP++ +K + I I + A LS +++TQ+E+ +QL + +KAE Sbjct: 290 CIPIYTDKNKFKFVIGIQVKSYKSIDKYFSDFAKELSALLATQIELYELDQLAQEVSKAE 349 Query: 361 LRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKEL 420 L+ L+++I+PHFLFN LN I+S R +P AR+LI NLS Y R ++ + DE+I +K E+ Sbjct: 350 LKMLRNQIHPHFLFNTLNTIASFCRTDPIKARELILNLSNYFRQTLK-RQDEKIILKDEI 408 Query: 421 YQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVT 479 ++ Y+AIE+ARFG++L + +I EE ++ +P ++QP++EN++ HGI G V Sbjct: 409 EFLESYLAIEKARFGERLNIDINIPEELLDAKVPVFVLQPIIENSMKHGILIKPQGGEVI 468 Query: 480 ISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI-- 537 I+ + ++++ ++DTG G+D + V PG IGL NV+ R+KLLYGE I Sbjct: 469 ITAIDEKDKIKFVIKDTGVGMDKNTLSYV-VESWPG--IGLSNVNKRLKLLYGEKSFICI 525 Query: 538 -RRLEPGTEIAFYIPNQ 553 +L GT++ F IP + Sbjct: 526 ESKLNEGTKVMFCIPKE 542 >UniRef50_B8DLB4 Signal transduction histidine kinase, LytS n=2 Tax=Desulfovibrionales RepID=B8DLB4_DESVM Length = 603 Score = 260 bits (664), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 183/552 (33%), Positives = 293/552 (53%), Gaps = 48/552 (8%) Query: 48 VTAIFSLFALFSTWSGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIG 107 + A+F +F + T++G V S N+R + V++ G+ GP VG G+IA HRYLID+G Sbjct: 53 LVAMFGMFGILGTYTGNFVFQSFANLRAMGVITAGLFGGPVVGAGAGIIAAGHRYLIDVG 112 Query: 108 GVTAIPCFITSILAGCISGWINLKIPKAQ-RWRVGILGGMLCETLTMILVIVWAPTTALG 166 G +A+PC + ++ G ++G + + P+ + W + G++ ET M LV+ A Sbjct: 113 GFSALPCGLATLSEGILAGLVAWRFPERRLDWATALTLGLIGETYHMGLVLWLAEPFTEA 172 Query: 167 IDIVSKIGIPMILGSVCIGFIVLLVQSVEGE---KEASAARQAKLALDIANKTLPLFRH- 222 +++V I +PMIL + L VQ++ + ++ + QA+ L IAN+TL R Sbjct: 173 VELVRVISLPMIL--INAMGAALFVQALRLQLHFRDLRDSTQARQILSIANRTLSHLRSG 230 Query: 223 VNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGK 282 + S + EII D+ H AVA+T + VLA+VG G+ ++ G + TR+ G+ Sbjct: 231 LTRASAQATAEIILDETHVAAVALTGGELVLAHVGAGDDHHMPGFQVRTMATRRVAETGE 290 Query: 283 -IIIKNNDE-AHRTP--EIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQ 338 + +++ D R P + +++PL + G + G LK+Y + + E+A GL+ Sbjct: 291 PLFVRDRDSIGCRQPGCPLTDAIIVPLRKGGQILGCLKLYGTKNRPLDQTRFELAKGLAD 350 Query: 339 IISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNL 398 + STQ+E+ ++ +AE+R LQ++INPHFLFN+LNA++S R P AR LI +L Sbjct: 351 LFSTQIELEEIGIKNQLIARAEIRRLQAQINPHFLFNSLNAVASFCRTAPGQARDLILDL 410 Query: 399 SRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDE-EVNCCIPSLLI 457 +RY+R N++ I + +EL Q++ Y+ IEQARFGD++ D+ + IP LLI Sbjct: 411 ARYMRRNLD-SSRGAIRLSEELEQVRSYLVIEQARFGDRIRADIDLAPGTADWLIPPLLI 469 Query: 458 QPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPK-------------- 503 QPLVEN++ HGI + G+V +S G+ + + V D G G+D Sbjct: 470 QPLVENSVRHGILAREEGGLVRLSAHADGDHLLVTVEDDGAGMDDDTRNAILAPDASDLS 529 Query: 504 ----VIERVEA--NEMPG------------NKIGLLNVHHRVKLLYGEGLHIR-RLEP-- 542 V R EA PG + IG N + R+ +YG +R EP Sbjct: 530 PHMYVEARNEALYEAQPGQTCSDTMVESLRDGIGARNCNQRLMQMYGPSYAMRIDSEPGR 589 Query: 543 GTEIAFYIPNQR 554 GT I+F IP Q+ Sbjct: 590 GTRISFRIPRQQ 601 >UniRef50_C4XJP3 Sensor protein LytS n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XJP3_DESMR Length = 605 Score = 256 bits (653), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 179/546 (32%), Positives = 299/546 (54%), Gaps = 22/546 (4%) Query: 3 EIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWS 62 E+ + + + R L+L F ++ + F + AVT +F +F + T++ Sbjct: 9 EVPGLFVHLSQRFGLLLAGGFAIMTLAPFERMGLGQKRPAWATAAVTVLFGVFGILGTYT 68 Query: 63 GVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAG 122 G V S N+R + V++ G+ GP VGI G+IAG HRYLID+GG +A+PC + + L G Sbjct: 69 GNAVFHSYANLRAMGVITAGLFGGPVVGIGAGLIAGGHRYLIDVGGFSALPCALATFLEG 128 Query: 123 CISGWINLKIP-KAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMI--- 178 +G I + P ++ W + G++ ET+ M LV+ + +++V IG PMI Sbjct: 129 AAAGLIARRFPGQSLDWGWAMALGLVGETVHMGLVLALSRPFGEALELVKVIGAPMIVIN 188 Query: 179 -LGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VNSESLRKVCEIIR 236 +G+ + L +S+ ++++ AR+ L IA++T+P R + ES + IIR Sbjct: 189 AMGAAIFTRALKLQRSLRERQDSTEARRI---LSIASQTVPHLRGGLTPESAQATAAIIR 245 Query: 237 DDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEA--HRT 294 + AVAIT +LA+VG G+ ++ G+ + + TR + G + + E+ Sbjct: 246 KETGVAAVAITGDSTILAHVGAGQDHHLAGEPWRTRATRLSYESGAALFLRDQESIGCAL 305 Query: 295 PE--IHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQL 352 P+ + +++PL + + G LKIY A + L E+A GL+ + STQLE+ Sbjct: 306 PDCPLREAIIVPLRKGAAIRGCLKIYGTKARPLDQPLFELAKGLADLFSTQLELEDIGIK 365 Query: 353 REMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDE 412 ++ AE+ LQ++INPHFLFN+LN I+S R P AR+L+ +L+RY+R N++ Sbjct: 366 NQLLAHAEISRLQAQINPHFLFNSLNTIASFCRTAPGQARELLLDLARYMRRNLD-SSRG 424 Query: 413 QIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNC---CIPSLLIQPLVENAIVHGI 469 I + +E+ Q++ Y+AIEQARFGD+ ++ +ID E C +P LLIQPLVEN++ HG+ Sbjct: 425 LIRLSEEMEQVRSYLAIEQARFGDR--IVSEIDLEPGCEDWLLPPLLIQPLVENSVRHGL 482 Query: 470 QPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGN---KIGLLNVHHR 526 Q G VT++V + + V D G G+ P+ R+ + + G+ +G N + R Sbjct: 483 QGRPEGGRVTVTVRRRDGHLWVEVADEGLGMSPETRARILSPDAAGSLTEGVGARNTNQR 542 Query: 527 VKLLYG 532 + L+G Sbjct: 543 LVQLFG 548 >UniRef50_A1HLU7 Signal transduction histidine kinase, LytS n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HLU7_9FIRM Length = 560 Score = 254 bits (649), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 184/571 (32%), Positives = 304/571 (53%), Gaps = 23/571 (4%) Query: 1 MHEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFST 60 M I +L + AL+ I + R+ R L S + + + + +F F+ F Sbjct: 1 MPNIGPLLWDIVRNVALVGIGAYLTTRLPTIRRTLTASEYRLLDRIILAMVFGAFSAFGN 60 Query: 61 WSGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSIL 120 W G+PV GS N RI+ ++GG+L GP VGI G+I I RY + GG T + +I+ Sbjct: 61 WIGIPVMGSFANTRIVGPVAGGLLGGPLVGIGAGIIGAIPRYFM--GGFTMWAAVLANIV 118 Query: 121 AGCISGWINLKIPKAQR--WRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMI 178 AGCISG ++ K AQR +V + +LCE + +LV+ + + ++ I +P I Sbjct: 119 AGCISGLVHKKC-GAQRINLKVALATALLCEIVLKVLVLTLSKPFSAAWELEKVIALPTI 177 Query: 179 LG-SVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLF-RHVNSESLRKVCEIIR 236 S+ +G + +V+ V E+E + AR A+ A+ + +T + +N+++ V +II Sbjct: 178 TANSLAVGLFIYIVRDVFAEQEKAQARSAQQAIRMLQQTSGFMHKGLNNDTAGNVAQIIY 237 Query: 237 DDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTP- 295 + +A AVAIT+T+ VLA+VG G +++ G ++ T+QA+ + II NN P Sbjct: 238 RETNAAAVAITDTEKVLAFVGAGADHHRPGQPILTGATKQAIKDRRTIIINNKNEVGCPD 297 Query: 296 ---EIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQL 352 ++ +++ +PL + G++K+Y I+S E+ G++ +S QL + + Sbjct: 298 KGCQLTAVVAVPLIVSDELVGSIKLYKSGNEVISSYEAELIRGIADFLSLQLAQRKLVEQ 357 Query: 353 REMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDE 412 + + +AE L+++INPHFLFN L I + R++P AR LI +LS +LR + +++E Sbjct: 358 QMLLAQAEYNMLKAQINPHFLFNTLGTIRAMTRIDPSAARALIKDLSDFLRKVLN-REEE 416 Query: 413 QIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQP 471 I +++EL ++ Y+ I+ RF D+L I EE ++C +P +QPLVENA+ HG+ P Sbjct: 417 IISLREELETVRTYVRIQCERFQDRLRFFEHIPEELLDCRVPVFSLQPLVENAVKHGVSP 476 Query: 472 CKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLY 531 K G V + + + + IAV D G G A IGL NVH R+++LY Sbjct: 477 KKTGGTVVLRAWKDQDDLCIAVEDDGVGFSA-------AKRETSGGIGLYNVHKRLQILY 529 Query: 532 GE--GLHIRRLEP-GTEIAFYIPNQRTPVAS 559 G GL I E GT + +P R V + Sbjct: 530 GNRYGLRIESAEKEGTRVIIRLPEVRAGVVA 560 >UniRef50_Q8E7H4 Sensor protein lytS n=10 Tax=Streptococcus RepID=LYTS_STRA3 Length = 581 Score = 248 bits (634), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 169/581 (29%), Positives = 303/581 (52%), Gaps = 46/581 (7%) Query: 7 MLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPV 66 +++ +F R +++I F L+ FR+L+ + S +E + + IF LF + S +G+ + Sbjct: 2 LMVLLFQRLGIIMILAFLLVNNSYFRQLIEE--RSKRETVVLVIIFGLFVIISNITGIEI 59 Query: 67 EG-----------------SLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGV 109 +G SL N R + + + ++ GP VG I G I G+HR+ G Sbjct: 60 KGDRSLVERPFLTTISHSDSLANTRTLVITTASLVGGPLVGSIVGFIGGVHRFFQ--GSF 117 Query: 110 TAIPCFITSILAGCISGWINLKIPKAQRWRVG---ILGGMLCETLTMILVIVWAPTTALG 166 + ++S+L G +SG I K+ + + IL ++ E++ M+ V ++ G Sbjct: 118 SGSFYIVSSVLVGIVSGKIGDKLKENHLYPSTSQVILISIIAESIQMLFVGIFT-----G 172 Query: 167 IDIVSKIGIPMI----LGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH 222 ++V I IPM+ LGS F+ +L + E + A Q + L++ +TLP R Sbjct: 173 WELVKMIVIPMMILNSLGSTL--FLAILKTYLSNESQLRAV-QTRDVLELTRQTLPYLRQ 229 Query: 223 -VNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYG 281 + +S R VCEII+ + DAV +T+ +VLA++GVG ++ G + ++ + G Sbjct: 230 GLTPQSARSVCEIIKRHTNFDAVGLTDRSNVLAHIGVGHDHHIAGQPVKTDLSKSVIFDG 289 Query: 282 KIIIKNNDEAHRTP----EIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLS 337 + I + A P +++S +V+PL G LK+Y+ ++ + + +GL+ Sbjct: 290 EPRIAQDKAAISCPDHNCQLNSAIVVPLKINDKTVGALKMYFAGDKTMSEVEENLVLGLA 349 Query: 338 QIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFN 397 QI S QL + E+ ++A+ AE++ALQ++INPHF FNA+N IS+ IR++ D AR + Sbjct: 350 QIFSGQLAMGITEEQNKLASMAEIKALQAQINPHFFFNAINTISALIRIDSDKARYALMQ 409 Query: 398 LSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLI 457 LS + R +++ D ++ +++E + Y+ +E+ RF DK + YDI +P + Sbjct: 410 LSTFFRTSLQGGQDREVTLEQEKSHVDAYMNVEKLRFPDKYQLSYDISAPEKMKLPPFGL 469 Query: 458 QPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN---EMP 514 Q LVENA+ H + K + + + G+ ++V D G GI +I+++ E Sbjct: 470 QVLVENAVRHAFKERKTDNHILVQIKPDGHYYCVSVSDNGQGISDTIIDKLGQETVAESK 529 Query: 515 GNKIGLLNVHHRVKLLYG--EGLHIRRLEPGTEIAFYIPNQ 553 G L+N+++R+ LLYG LH + GT++ + IPN+ Sbjct: 530 GTGTALVNLNNRLNLLYGSVSCLHFSSDKNGTKVWYRIPNR 570 >UniRef50_B1YHT0 Signal transduction histidine kinase, LytS n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YHT0_EXIS2 Length = 588 Score = 248 bits (634), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 172/583 (29%), Positives = 306/583 (52%), Gaps = 44/583 (7%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 +F ++ + +R +M+I F L + R LL K + + + IF+ + + S ++G Sbjct: 1 MFELIPFLLERLGIMIILAFILAQWGPTRRLL-KQPEAGWQFGLLILIFATYGILSNYTG 59 Query: 64 VPVE----------------GSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIG 107 V V+ ++ N R + V+ G+L GP G ITG++ GIHRY +G Sbjct: 60 VKVDLAKFLPHTWLEQVDGTSAIANTRTMIVVISGLLAGPIGGTITGLLVGIHRY--TLG 117 Query: 108 GVTAIPCFITSILAGCISGWINLKIPKAQRWRVG-------ILGGMLCETLTMILVIVWA 160 G TA C +++++AG +SG + R R+G L G L M L+++++ Sbjct: 118 GFTAFACALSTVVAGGVSGLLR----PYWRDRLGSRALLPICLTGFLM-VFEMSLILLFS 172 Query: 161 PTTALGIDIVSKIGIPMILGSVCIGFIVL-LVQSVEGEKEASAARQAKLALDIANKTLP- 218 ++++ I +PM + +V ++ L +++ E+E AR+A+ +L IA+ TLP Sbjct: 173 DPFPAALELIQFIFLPMTVVNVLGVWLFLSIIRLAAREEEHVRAREAERSLHIADLTLPH 232 Query: 219 LFRHVNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAM 278 L R + ++ V +I+ ADAV++T+ +LA++GVG ++Q+G + + T + Sbjct: 233 LTRGLTIQTAEAVADILLQQTRADAVSLTDQSVILAHIGVGSDHHQSGGHWTTRPTEHVL 292 Query: 279 NYGKIIIKNNDEAHRTPE----IHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAV 334 G++ + + + P+ + + ++ PL GTLK+YY H + + E+ Sbjct: 293 TDGQLRLVTDRDEIGCPKADCPLQAGIIAPLTIGETTIGTLKVYYPHPELLDAVEVELIE 352 Query: 335 GLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQL 394 GL+++ STQL + +AE+ + AE+RAL+++I+PHFLFNA+N I + R + + AR L Sbjct: 353 GLAKLFSTQLALGKAERQAGLLKDAEIRALEAQIHPHFLFNAINTIYALCRTDVEQARTL 412 Query: 395 IFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIP 453 + LS + R N++ +I ++KEL I+ YI++E ARF + V D+++ +P Sbjct: 413 LLELSTFFRSNLQGARSTKIPLQKELEHIEAYISLEAARFPSRPFVDIDLEDGTEQLLVP 472 Query: 454 SLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV--EAN 511 ++QPL+ENA H P + G V ++ +++ + V D G GID + + R+ E Sbjct: 473 PFVLQPLIENAFQHAFSPGQ-TGYVGVTAWLTADQLVLEVVDNGRGIDAERLTRLGREVV 531 Query: 512 EMPGNKIGLLNVHHRVKLLYGEGLHIR-RLEP--GTEIAFYIP 551 E G L N R+K LY E R +P GT I ++P Sbjct: 532 ESNGTGTALFNTAERIKSLYAENGSFRLTSQPGEGTTITIHLP 574 >UniRef50_Q3DHF4 Sensor histidine kinase n=10 Tax=Streptococcus agalactiae RepID=Q3DHF4_STRAG Length = 579 Score = 247 bits (630), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 160/526 (30%), Positives = 281/526 (53%), Gaps = 35/526 (6%) Query: 7 MLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPV 66 + L + +RA L+++ + + I ++ L K K + +FSLFA+ S ++GV + Sbjct: 3 LFLIMMERAGLIILLAYAFVHIPFIKQTL-KQPELKKHQYILLILFSLFAIISNFTGVEI 61 Query: 67 EG----------------SLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVT 110 + S+ N R++ + G++ GP VGII G+++ RYL GG+ Sbjct: 62 QSDLSIIPQTLNHIADQSSVANTRVLTIGVSGLIGGPIVGIIVGLLSVFVRYLQ--GGLA 119 Query: 111 AIPCFITSILAGCISGWI-NLKIPKAQRWRV--GILGGMLCETLTMILVIVWAPTTALGI 167 I+S+L G SG N + RV ++ G E L MI +++++ + Sbjct: 120 PHIYVISSLLIGLCSGLSGNYLRRNYNKIRVLDAMVVGFGMEILQMICILIFSVDFNQAL 179 Query: 168 DIVSKIGIPMILG-SVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VNS 225 +VS I +PMIL ++ +G + ++ S + +E + A Q L++AN TLP R + + Sbjct: 180 RLVSFISMPMILSNTLGLGIFISIISSTQKLEEHAKAFQTHQVLELANLTLPYLRKGLTT 239 Query: 226 ESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIII 285 ES + V EII + AV++T+ +LAYVG G ++ ++ ++A++ GK+ + Sbjct: 240 ESCQPVAEIIHKHMDVSAVSLTSQSAILAYVGDGADHHLPNTQILTKLAKRAIDTGKVSV 299 Query: 286 KNNDEA----HRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIIS 341 + H+ + S +VIPL V+ GTLK+Y+ A +T +++A GL I S Sbjct: 300 ATDKSEIECDHKNCPLSSAIVIPLHIHDVIVGTLKLYFSDAQHMTYVDRQLAEGLGNIFS 359 Query: 342 TQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRY 401 TQL + +AE+ + AE+++LQ+++NPHFLFNALN I IR++ + AR+L+ + S+ Sbjct: 360 TQLALGQAEEATRLLQDAEMKSLQAQVNPHFLFNALNTIYGLIRMDSEKARKLVQDFSKV 419 Query: 402 LRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNC----CIPSLLI 457 +R N++ I + EL Q+ Y+A+E+ARF + V +++D + N IP + Sbjct: 420 IRANLQRAKQNLIPLHDELEQVNAYLALEEARFPN--MVAFNLDNQTNSDDNLMIPPFTL 477 Query: 458 QPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPK 503 Q L+EN+ H + + +++A +R+ I V+D G GI PK Sbjct: 478 QVLIENSYKHAFKHVNKNNQLKVTIARNNDRLHIIVQDNGIGI-PK 522 >UniRef50_C0ZBJ5 Two-component sensor histidine kinase n=2 Tax=Bacillales RepID=C0ZBJ5_BREBN Length = 583 Score = 241 bits (615), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 172/577 (29%), Positives = 287/577 (49%), Gaps = 34/577 (5%) Query: 6 NMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVP 65 N+ L + +R ++L F L R LFR+LL + H + A + +F LF + T++GV Sbjct: 3 NLTLLLIERMGILLTLAFILTRTSLFRQLLDRELHVGTSI-AFSVMFGLFGIAGTYAGVV 61 Query: 66 VEGS----------LVNVRIIAVMSGGILFGPWVGIITG------VIAGIHRYLIDIGGV 109 V+G L + IIA + + + VIAG+H + +GG Sbjct: 62 VQGESYHPAFWIFRLSHDEIIATSTLVGVVIGGLLGGPLVGLGAGVIAGLHVF--QLGGF 119 Query: 110 TAIPCFITSILAGCISGWINLKIPKAQ--RWRVGILGGMLCETLTMILVIVWAPTTALGI 167 A P ++ + G ++G++ + + + GM + M L+++ A L Sbjct: 120 AAAPMGLSIPITGLLAGYVARFFSQERVISPSKAMFIGMFAPIIQMSLLLIMAAPPELAR 179 Query: 168 DIVSKIGIPMIL-GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLP-LFRHVNS 225 +V+ IGIPM+L SV I +++ E E SAA +A+ + IA + LP L R + Sbjct: 180 TMVNVIGIPMVLTNSVSIAIFTTMIRVALQEAERSAAIEAERSFTIAERILPHLKRGLTP 239 Query: 226 ESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIII 285 ++ + +++ + A AVA+TN + +LA+VGVG ++ G+ S ++A+ G I Sbjct: 240 QTAQSAALVLQKETKAAAVAVTNRERLLAHVGVGADHHHPGEALHSELDKRALFSGGIDK 299 Query: 286 KNNDEA----HRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIIS 341 E + +H+ +++P+ E V G +K+YY QI + +A GL +IS Sbjct: 300 GLTRETVGCKRKNCSLHAAILVPIKEGDSVVGLIKLYYRRPQQIGKVQEALAKGLGNLIS 359 Query: 342 TQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRY 401 QL +S EQ++ + AELR LQ++I PHFLFN LN+I + IR++P AR + L + Sbjct: 360 NQLTLSLTEQMKGLMKDAELRMLQAQIQPHFLFNTLNSIVTLIRIDPQLARHMTIQLGVF 419 Query: 402 LRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPL 460 +R+N++L + +++EL + Y+ I + RF ++ V I+ V IP +QPL Sbjct: 420 MRFNLKLTASPLVTVRQELDHLHAYLEIIKIRFSEQFAVRTIIEAGVEEALIPPGTLQPL 479 Query: 461 VENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPK---VIERVEANEMPGNK 517 EN I HG++ G + + V V + D G G V+ +V GN Sbjct: 480 FENCIQHGVRDITNGGEIILHVKRQDVHVAFQIEDNGQGFPDNLLPVLGKVPMESKEGNG 539 Query: 518 IGLLNVHHRVKLLYGE--GLHI-RRLEPGTEIAFYIP 551 IG+ NV+ R+ L G+ LH + E G+ I F IP Sbjct: 540 IGIHNVNQRLISLCGQEAQLHFANKQEGGSMITFTIP 576 >UniRef50_Q182U1 Two-component sensor histidine kinase n=6 Tax=cellular organisms RepID=Q182U1_CLOD6 Length = 400 Score = 229 bits (584), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 119/221 (53%), Positives = 157/221 (71%), Gaps = 6/221 (2%) Query: 334 VGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQ 393 +G+ +IS + + ++ E NKAE++ALQ +INPHFLFN+LN I+S IR +PD AR+ Sbjct: 180 IGIGFVISIVEGIEKDKKDIEARNKAEIKALQRQINPHFLFNSLNTIASFIRFSPDKARE 239 Query: 394 LIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIP 453 LI NLS YLRYN+E D+ IDI KE+ Q+K ++ IE+ARFG+ LTV YDI E+VN IP Sbjct: 240 LIINLSTYLRYNLEYSDN-LIDINKEIEQVKSFVEIEKARFGELLTVSYDI-EDVNIKIP 297 Query: 454 SLLIQPLVENAIVHGIQPCKGKGVVTISVAE----CGNRVRIAVRDTGHGIDPKVIERVE 509 SL+IQPLVENAI+HGI GVV IS+ + N VRI++ D G GI ++I V Sbjct: 298 SLIIQPLVENAIIHGILESGRAGVVKISIKKLPYSLENTVRISIEDNGIGISEEIINNVY 357 Query: 510 ANEMPGNKIGLLNVHHRVKLLYGEGLHIRRLEPGTEIAFYI 550 + MP NKIGL NVH R+KL+YG GL+IRR++ GT I FY+ Sbjct: 358 QDNMPENKIGLYNVHLRLKLMYGRGLNIRRIDNGTLIVFYV 398 Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 107/356 (30%), Positives = 195/356 (54%), Gaps = 32/356 (8%) Query: 6 NMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVP 65 ++L+A+ ++ +L+++ + ++++F+++ K +S +L+ + +F+ A+F T+SG+ Sbjct: 4 SILIALIEKTSLIVVLFLLITKLKIFKQIFQKEEYSFNDLVCIALVFTFLAIFGTYSGIN 63 Query: 66 VEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCIS 125 GS+VN RII+++SGGILFGP VGI GV +GIHRY +DIGG+T++PC ++SILAG +S Sbjct: 64 YMGSIVNTRIISIVSGGILFGPMVGITAGVFSGIHRYFMDIGGITSVPCLLSSILAGVLS 123 Query: 126 GWINLKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILGSVCIG 185 G++ +IPK R GIL GM+ E+ T++L+ + + +L I I+ I +P+I+G + IG Sbjct: 124 GFLYKRIPKQHRVMYGILVGMISESFTILLIYLISYPHSLAIQIIGGIYLPLIVGQIGIG 183 Query: 186 FIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIHADAVA 245 F++ +V+ +E +K+ AR + + P H SL + IR Sbjct: 184 FVISIVEGIEKDKKDIEARNKAEIKALQRQINP---HFLFNSLNTIASFIRFSPDKAREL 240 Query: 246 ITNTDHVLAYVGVGEHNYQNGDDFI----------SPTTRQAMNYGKIIIKNNDEAHRTP 295 I N L Y N + D+ I S + +G+++ + D Sbjct: 241 IINLSTYLRY------NLEYSDNLIDINKEIEQVKSFVEIEKARFGELLTVSYDIEDVNI 294 Query: 296 EIHSMLVIPLWEKGVVTGTL-------------KIYYCHAHQITSSLQEMAVGLSQ 338 +I S+++ PL E ++ G L K+ Y + + S+++ +G+S+ Sbjct: 295 KIPSLIIQPLVENAIIHGILESGRAGVVKISIKKLPYSLENTVRISIEDNGIGISE 350 >UniRef50_Q3AEC2 Sensor histidine kinase n=2 Tax=Clostridia RepID=Q3AEC2_CARHZ Length = 427 Score = 228 bits (581), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 133/354 (37%), Positives = 215/354 (60%), Gaps = 13/354 (3%) Query: 210 LDIANKTLPLFRH-VNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDD 268 L +AN+ LP+ + +N E+ K+ EII+ +AVAIT+ + VLAYVGVG ++ GD Sbjct: 61 LMLANEALPIIKQGLNVETAGKIAEIIQRISDMEAVAITDREKVLAYVGVGCERHKIGDP 120 Query: 269 FISPTTRQAMNYGKIIIKNNDEAHRTP------EIHSMLVIPLWEKGVVTGTLKIYYCHA 322 + T++A+ G++ I ++ + + + +V+PL +G V GT+K+Y Sbjct: 121 IRTFATKEAIRTGELKIIDHSLKYICSVKDCDCPLQAAVVVPLKIRGQVVGTIKLYQTKK 180 Query: 323 HQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISS 382 ++ + ++A+G++QI++ Q+E++ ++ +M KA+L ALQ+KINPHFLFN LN I Sbjct: 181 GEMPAQTVKLAMGIAQILNLQMEIAELDRQAQMVTKAQLEALQAKINPHFLFNTLNTIIM 240 Query: 383 SIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIY 442 R NP+ AR+L+ +L+++ R ++ K +K+EL + Y+ +E+ARF KL +I Sbjct: 241 FNRTNPELARKLLIHLAKFFRQTLK-KQGMFGTLKEELDYVNTYLVLEKARFRQKLRIIR 299 Query: 443 DIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGID 501 DID E +N P L +QPLVENA+ HGI P + +G V I + G ++ + ++D G GI Sbjct: 300 DIDRELLNYQFPVLTLQPLVENAVKHGITPKESQGTVLIRIKRDGEKINVEIKDDGVGIS 359 Query: 502 PKVIERV-EANEMPGNKIGLLNVHHRVKLLYGE--GLHIR-RLEPGTEIAFYIP 551 P ++ RV E GN +G+ NVH R+ LYG GL I +L GT ++F IP Sbjct: 360 PSMVGRVLEPGFGSGNGVGMSNVHERLLSLYGREAGLKIESKLGVGTTVSFSIP 413 >UniRef50_B0G7P0 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0G7P0_9FIRM Length = 583 Score = 225 bits (573), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 173/567 (30%), Positives = 286/567 (50%), Gaps = 26/567 (4%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 I +++ A+ AL+ I L RI+ ++L+ + K L ++ IF+ + ST G Sbjct: 16 IKDIVYALIVNIALLAIIANLLSRIQTVQKLILQEKRGLKGDLILSMIFAGLIILSTCIG 75 Query: 64 VPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGC 123 V + +N R+I MS G+L GP VG+ + I I+ + V A +IL G Sbjct: 76 VKITSYSLNTRVIGAMSAGLLGGPLVGLYSSAIGAIYVLIFSTPRVFARGSAFATILFGL 135 Query: 124 ISGWINLKIPKAQR--WRVGILGGMLC--ETLTMILVIVWAPTTALGIDIVSKIGIPMIL 179 + P QR W+ L + C E M ++ + + +D + +PMI+ Sbjct: 136 LGAGF---YPYFQRGKWKYTDLFLLACFAEICDMASLLRMTVSLEVAVDTIVDAALPMII 192 Query: 180 GSVCIGFIVLL--VQSVEGEKEASAARQAKLALDIANKTLPLFRH---VNSESLRKVCEI 234 + IG IV + V ++ ++RQ + ++ K LPL + +E+++K+ +I Sbjct: 193 MN-AIGMIVFISNFNGVFIFQDLESSRQIQKMSVLSQKCLPLLQDGGLNKAENMKKLSDI 251 Query: 235 IRDDIHADAVAITNTDHVLAYVGVGEHN----YQ-NGDDFISPTTRQAMNYGKIIIKNND 289 I + + T+ + V+ + + YQ D I RQAM GK++ Sbjct: 252 ILKETQWSGILFTDREKVIQWQCKAKDEQAIFYQAKYGDPIPEICRQAMEEGKLVKYEAQ 311 Query: 290 EAHR----TPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLE 345 + T + +S+ +P K G+L ++ S E+ L + S+QL Sbjct: 312 TGEKKWIHTAQDYSISSVPFRVKNQSVGSLTVWMKRQWMDRQSEIELLQHLMTLGSSQLA 371 Query: 346 VSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYN 405 V EQ + + +AE +ALQ ++NPHFLFNALN IS R NP+ AR+L+ L+ Y RYN Sbjct: 372 VLELEQQKNLLAQAEFKALQFQVNPHFLFNALNTISWVCRENPEEARELLLTLADYFRYN 431 Query: 406 IELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAI 465 + D + +++EL +KDY+ IE+ARF +KL V YD+ E++ +P+L++QPLVENA+ Sbjct: 432 LNY-DAYMVPLREELEHVKDYLQIEKARFEEKLQVTYDVPEKMEILVPTLILQPLVENAV 490 Query: 466 VHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHH 525 +GI G V I + E + R+ + D G G +V+E++ +E G+ IGL NVH Sbjct: 491 RYGIDRT-GCRYVYIGITEEADAYRVEISDHGKGFPEEVLEKIAKDEPVGSSIGLQNVHK 549 Query: 526 RVKLLYGE--GLHIRRLEPGTEIAFYI 550 R+K +YGE GL I+ G+ + Y Sbjct: 550 RMKSVYGEERGLQIQSTPKGSTVKLYF 576 >UniRef50_C5CI42 Signal transduction histidine kinase, LytS n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CI42_KOSOT Length = 559 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 166/560 (29%), Positives = 290/560 (51%), Gaps = 30/560 (5%) Query: 6 NMLLAVFDRAALMLICLFFLIRIRLF-RELLHKSAHSPKELLAVTAIFSLFALFSTWSGV 64 N+ + +R A++ + ++ + R L+ +S P+ + + + + + T+ G+ Sbjct: 4 NIAFILIERVAIITMTIYIIFTFSFSQRHLIIRS--KPQSTIFIGILGGVLGIIGTFLGI 61 Query: 65 PVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCI 124 + ++ N R + V+ ++ GP G I+G+IAG+HR + +GGVT I C + +I+ G + Sbjct: 62 EYKTAITNYRDMGVIIAAVIGGPISGTISGLIAGLHR--MTLGGVTGISCSLATIMVGVL 119 Query: 125 SGWI-NLKIPKAQR--WRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILG- 180 +G+ L PK R + V + GM L + ++ + A DIV+ + +PM+LG Sbjct: 120 TGFSRKLFGPKLLRPQFVVPLTIGMEFLHLGFVYLVTFPKDIA--ADIVTTVLLPMVLGN 177 Query: 181 SVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLF-RHVNSESLRKVCEIIRDDI 239 S+ + + L+ ++++ EKE + I T+ L + +N + R++CE I+ Sbjct: 178 SIGVLLLSLIFRNLQIEKENVTEETTQSMFKIVENTIGLIDKGLNETTARQICETIKKLT 237 Query: 240 HADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKI-IIKNNDE---AHRTP 295 DAVA+T + +L++VG GE ++ G+ ++ +TR + GK +IK+ +H+ Sbjct: 238 SFDAVALTTREKILSHVGAGEDHHTPGNPNLTESTRLTIQKGKARLIKHRSGIGCSHKNC 297 Query: 296 EIHSMLVIPL-WEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLRE 354 + ++IP+ + G GTLK+Y + I A GL QI+S +LE+S+ + Sbjct: 298 PLFRGILIPIKFTNGETIGTLKLYKTKENDIEKYEITFAKGLGQILSLELELSKTSKEAR 357 Query: 355 MANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQI 414 +A R L +K +PHFLFN LNA++ R + + AR++I LS +RY + K + Sbjct: 358 DNAEARYRQLVAKTDPHFLFNILNALAYLTRHDSEKAREMILKLSEMMRYTLREKRT-FV 416 Query: 415 DIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKG 474 + EL +++Y+ + + RFG+ L + D + IP IQP+VEN+I HG+ P K Sbjct: 417 PLDDELSFVRNYLQLMKIRFGELLDFKMEKDLKEPFWIPPFTIQPIVENSIKHGMIPNK- 475 Query: 475 KGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEG 534 K V ISV V I + DTG GI+ N++ IGL + R+ LYGE Sbjct: 476 KLFVRISVKVKSRNVEILIFDTGKGIE-------NENKLQ-TGIGLKLIRERLSNLYGEK 527 Query: 535 LHIR---RLEPGTEIAFYIP 551 H+ + GT I IP Sbjct: 528 AHLEVNSKPMKGTTITIRIP 547 >UniRef50_C9R972 Signal transduction histidine kinase, LytS n=1 Tax=Ammonifex degensii KC4 RepID=C9R972_AMMDK Length = 465 Score = 221 bits (562), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 132/383 (34%), Positives = 218/383 (56%), Gaps = 17/383 (4%) Query: 185 GFIVLLVQSVEGEKEASAARQAKLALD----IANKTLP-LFRHVNSESLRKVCEIIRDDI 239 G + L+++ GE+ S ALD IA++TLP L R +N E+ K+ EII+ Sbjct: 63 GLLFLILRRRGGEERISVRALDSQALDPTLKIADETLPYLRRGLNPETAVKIAEIIQRIG 122 Query: 240 HADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTP---- 295 AVAIT+ + +LA++G G + G ++ T++ + G+I + P Sbjct: 123 DVPAVAITDRERILAFLGPGCDRHPPGGGIVTHATKRVIETGEIKVVERRADFECPVKDC 182 Query: 296 --EIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLR 353 + + +++PL +G V GT+K+Y + +L +AVG++QI+ Q+E++ ++ Sbjct: 183 VCPLGAAVIVPLKCRGEVVGTVKLYRTEEGPLPRTLVNLAVGIAQILGIQMELAELDRQA 242 Query: 354 EMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQ 413 ++ KA+L AL+++INPHFLFN LN I R NPD AR+L+ L+ + R+ ++ Sbjct: 243 QLVTKAQLDALRAQINPHFLFNTLNTIIMFSRTNPDRARRLLIRLASFFRHALK-STGHF 301 Query: 414 IDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPC 472 +++E+ + Y+ +E+ARFG KL + ID+ + + +P L +QPLVENAI HGI P Sbjct: 302 TTLREEMECVNTYLVLEKARFGQKLRFVRSIDKTLYDYLVPVLTLQPLVENAIKHGITPK 361 Query: 473 KGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV-EANEMPGNKIGLLNVHHRVKLLY 531 G G V ISV G +R+ V D G GI P+++ ++ G+ +GL NVH R++ L+ Sbjct: 362 LGPGTVRISVRRQGEEMRVEVADDGVGIPPEIMPKILTPGSASGSGVGLYNVHERLRGLF 421 Query: 532 GEGLHIR-RLEP--GTEIAFYIP 551 GEG + + EP GT + F +P Sbjct: 422 GEGYGLEIKSEPGKGTTVRFRLP 444 >UniRef50_B4UL02 Signal transduction histidine kinase, LytS n=9 Tax=Proteobacteria RepID=B4UL02_ANASK Length = 560 Score = 220 bits (560), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 157/544 (28%), Positives = 272/544 (50%), Gaps = 32/544 (5%) Query: 6 NMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVP 65 +LL +F+ A+ + R FR P+ L++ F+ A+ T+ G+P Sbjct: 4 RLLLTLFEAMAVFFVLFHLYSRSPAFRPA-RTDWLRPRAKLSLLLFFTGIAILGTYLGLP 62 Query: 66 VEG-SLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCI 124 + G ++ N R + + GG+L GP VG+ G+++G HR + +GG TA I + L G + Sbjct: 63 LAGGAIANTRAVGAVLGGMLGGPAVGVAVGLLSGAHR--LTLGGFTAGAGAIATTLEGLM 120 Query: 125 SGWINLKIPKAQ-----RWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL 179 G ++ ++ A W++ E L M L++ + + +V IG+PMIL Sbjct: 121 GGLVHRRLASAAPDRLISWKLAFAVTAAGEALHMGLLLAVSRPFHESVRVVEGIGVPMIL 180 Query: 180 GSVCIG---FIVLLVQSVEGEKEASAARQAKLALDIANKTL-PLFRHVNSESLRKVCEII 235 + +G F+ LL E +AA AK AL IA +TL PL R + ++ II Sbjct: 181 AN-SVGAALFMTLLRDRHERYDRLAAATSAK-ALRIAERTLGPLARGFDRSVAGELASII 238 Query: 236 RDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAH--- 292 +++ AVAIT+T+ VLA+VG G +++ G SP TR A+ +++ + + H Sbjct: 239 QEETGVGAVAITDTETVLAFVGRGSDHHRPGLPIASPLTRGAIERHEVVFADGEHEHYRC 298 Query: 293 ---RTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRA 349 + S +VIPL G GT+++ + + + G++ ++S QL +R Sbjct: 299 AVSAACPLDSAVVIPLVVDGAAIGTVQLLETARTRFRRLNRSLGEGIADLLSDQLLRARF 358 Query: 350 EQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELK 409 + + + EL+ LQ++++PHFLFNALN + + R +P+ AR+L+ +LS R N++ + Sbjct: 359 HEQKSLLVLTELKLLQAQVDPHFLFNALNTVHAVTRTDPERARELLGHLSALFRKNLK-R 417 Query: 410 DDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHG 468 +++EL Y+ IE+ARFGD+L V+ ++D + +P+ +QPL+ENA+ HG Sbjct: 418 SAPLSTLEEELEHAGAYLEIEKARFGDRLAVLTEVDPALLRLRLPTFTLQPLIENAVKHG 477 Query: 469 IQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVK 528 + G+ I G I + D P+ + +G+ V R+K Sbjct: 478 LGATLGQATARIRAYRQGATAVIEIEDDAGAYAPRA---------GADGMGMSLVDRRIK 528 Query: 529 LLYG 532 L G Sbjct: 529 NLLG 532 >UniRef50_B0TBI2 Sensor protein lyts n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TBI2_HELMI Length = 583 Score = 219 bits (558), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 153/489 (31%), Positives = 259/489 (52%), Gaps = 29/489 (5%) Query: 94 GVIAGIHRYLIDIGGVTAIPCFITSILAGCISGWINLKIPKAQRWRVGILGGMLCETLTM 153 G IAG+H L+ +GG+ A IT +L G ++GW+ QR +L G + Sbjct: 101 GAIAGMH--LLTLGGMAAEINAITMVLTGLLTGWL------VQRSGESLLSGRWAFVVAF 152 Query: 154 ILVIV--WAPTTALGID-----IVSKIGIP-MILGSVCIGFIVLLVQSVEGEKEASAARQ 205 + ++ A T L D + +P I+ ++ + ++++V E E A + Sbjct: 153 FVTLLAGGALVTHLHPDDGPVRFLEGTVLPSAIVNALAAAVFMEMLRTVSREVE-EVALE 211 Query: 206 AKLALDIANKTLP-LFRHVNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQ 264 + AL ++ TL L + +N+++ R + E+ ++ AV IT+ VL +VG+GE Y Sbjct: 212 TERALKLSEFTLSQLQQGLNADTGRAIAEVFMTELKTLAVTITDNKSVLVHVGIGEEEYP 271 Query: 265 NGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSML----VIPLWEKGVVTGTLKIYYC 320 G + + +A+ GK+ + E ++ + +L VIP G V G LK+Y+ Sbjct: 272 PGRLVHTKGSLKALETGKLQVVYRHEPYKHSYLDKILRAAIVIPFSCSGQVIGLLKLYFY 331 Query: 321 HAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAI 380 + I +A GL ++IS QL + E+ + AELR LQ++INPHFLFN+LNAI Sbjct: 332 RSQDIRPYEIGLAQGLGKLISYQLSLLETEKKSLLLKDAELRMLQAQINPHFLFNSLNAI 391 Query: 381 SSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTV 440 S IR NP AR+++ L+ ++R N+++ + + +++EL ++ YI I Q RF D+LT+ Sbjct: 392 VSLIRTNPSLARKMMVQLADFMRMNLKMMEMPLVSLEEELRHLRAYIDIVQLRFADRLTI 451 Query: 441 IYDIDEEVNCC-IPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHG 499 +++ +N IP +QPLVEN+I HG++ G + +S+A GN V++ V D G G Sbjct: 452 RLEVEPGLNNFRIPPSTLQPLVENSIQHGLKDISEGGSIVLSIARDGNGVQVRVTDNGSG 511 Query: 500 IDPKVIERVEANEMP---GNKIGLLNVHHRV-KLLYGEGLHI--RRLEPGTEIAFYIPNQ 553 I ++ R+ ++P GN IG+ NV R+ LL GE + E G E+ F++P Sbjct: 512 IPESLLNRIARQQLPSQKGNGIGVHNVSQRLTSLLGGESQLVFSNLAEGGCEVRFFLPEP 571 Query: 554 RTPVASQAT 562 + V + + Sbjct: 572 KEEVVNDES 580 >UniRef50_Q1QCQ6 Histidine kinase internal region n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1QCQ6_PSYCK Length = 582 Score = 218 bits (555), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 171/571 (29%), Positives = 287/571 (50%), Gaps = 51/571 (8%) Query: 1 MHEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFST 60 M EI + +L+ R ++++ + + R+ +FR+++ + L + IF +F + Sbjct: 1 MWEILSQMLS---RMSIIITIAYLITRLPIFRKMISQRV-GIGGLFVLIIIFGMFGVIGN 56 Query: 61 WSGVPVE------------------GSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRY 102 ++ + VE ++ + R I ++ GG GP VGI VIAG HR Sbjct: 57 YTALVVEPGNQKVISNIWNPTLQSNNAVADTRNIGIIIGGFFGGPIVGIGASVIAGAHRL 116 Query: 103 LIDIGGVTAIPCFITSILAGCISGWINLKIPKAQRWR-VGI-------LGGMLCETLTMI 154 L+ GG + F SIL GC +GW K WR +G+ L ++ T+ ++ Sbjct: 117 LM--GGFISGATFWVSILGGCFAGWFGYK------WRGMGLIKPRYMFLTSIIILTIQIL 168 Query: 155 LVIVWAPTTALGIDIVSKIGIPMIL-GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIA 213 + V + +++ G P+I+ SV I ++ +V E++ + A Q IA Sbjct: 169 AIPVLTTDHTTALKLIAFTGPPIIIINSVGIWICAMIFYNVVVEEDRTRASQTVKTFSIA 228 Query: 214 NKTLPLFRH-VNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISP 272 ++T LFR +N S +K +II+ + VAIT LAY G + +N ++ ++ Sbjct: 229 DQTFSLFRSGLNENSAKKSTKIIKKLTAVEHVAITRGIRELAYTGTLNNQKRNEEEDLA- 287 Query: 273 TTRQAMNYGKIII---KNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSL 329 + + A++ GK ++ K+ + + +V+P + GT+ YY + IT Sbjct: 288 SRKLALSTGKSVLNEPKSKWLFSKKSNSRASVVVPFCVQNKTIGTITFYYASSLHITVVE 347 Query: 330 QEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPD 389 +E+ GL ++ S QLE+ E+ ++ A++ ALQS+I PHFLFNALN I + R++P Sbjct: 348 KELIEGLGKLFSNQLELGEIERHNQLLQNAKIEALQSQIQPHFLFNALNTIVALCRIDPM 407 Query: 390 TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-V 448 AR L+ +LS YLR N+ D + + KE+ ++ Y+AIEQARF DK V ++ + + Sbjct: 408 LARDLLLHLSTYLRNNLSGIADFLVPVYKEMENVQAYLAIEQARFPDKFVVNIEVAPDLI 467 Query: 449 NCCIPSLLIQPLVENAIVH-GIQPCKGKGVVTISVAECGN-RVRIAVRDTGHGIDPKVI- 505 C IP +IQPLVENAI H G + + KG V I + + + I V D G G++ I Sbjct: 468 ECLIPPFIIQPLVENAIKHGGFKKIEAKGAVHIEIKKISELLILIKVSDNGIGVELNRIV 527 Query: 506 ---ERVEANEMPGNKIGLLNVHHRVKLLYGE 533 ERV + G+ L N+ R+ LY + Sbjct: 528 DLGERVVKSSKDGSGTALFNIKERLTALYSQ 558 >UniRef50_B7IG85 Regulator of cell autolysis n=1 Tax=Thermosipho africanus TCF52B RepID=B7IG85_THEAB Length = 554 Score = 218 bits (554), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 155/537 (28%), Positives = 281/537 (52%), Gaps = 26/537 (4%) Query: 6 NMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVP 65 N+ L + +R +L+L+ + + + + K+ K L + I + T G+ Sbjct: 4 NISLILLERVSLILVITYITFQSYFIKNIFGKTL-VAKNRLVLGIIGGFLGILGTVFGIR 62 Query: 66 VEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCIS 125 G++VN R I V+ G+L G G+I +I+ I R + GG+T IPCF+ +I AG IS Sbjct: 63 YNGAIVNYRDIGVIFAGMLGGIPAGLIAALISSIFRLFL--GGITVIPCFLGTITAGIIS 120 Query: 126 GWIN-LKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL-GSVC 183 G+I+ L K + +L +L E + + V+V +L DI KI PM++ S+ Sbjct: 121 GFISHLYGRKHFTFVRTLLYTVLIEIVHLTYVLVMVKPYSLAFDITFKILFPMVITNSLG 180 Query: 184 IGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VNSESLRKVCEIIRDDIHAD 242 + F+ +++++E + E +A I K+L N + + + E I ++ + D Sbjct: 181 VSFLNYMIKNIEEQLEQTAENTINSIFVIMEKSLSSIEEGFNETNAKLIAETILNNTNFD 240 Query: 243 AVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYG---KIIIKN--NDEAHRTPEI 297 AVAIT+ + +L +VG+G ++ G + + T++ + G K++ K + A+ P + Sbjct: 241 AVAITDKNKILTHVGIGSDHHVTGMNIQTNATKKVIESGHGLKVVGKKGISCSAYNCP-L 299 Query: 298 HSMLVIPLWE-KGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMA 356 +S ++IPL + + GTLK+YY +I +S L+Q +S + ++R + ++A Sbjct: 300 YSGIIIPLTDLNNELIGTLKLYYSKKGEIKNSDIIFGKKLAQTLSLIISLARVNESLKLA 359 Query: 357 NKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDI 416 + +LR L S ++PHFLFN LNAI + PD I N+S LRY + ++ + + + Sbjct: 360 TEEKLRELMSNLSPHFLFNTLNAIKYISKKEPDKVNYFIDNISELLRYTL-YENKKFVSL 418 Query: 417 KKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKG 476 K E+ +Y+ + + R+ DKL+ ++ E IP ++QPLVEN+I HG++ + + Sbjct: 419 KDEIKFTTNYLELMKLRYKDKLSYEITVNVENTIKIPPFILQPLVENSIKHGMK--EDEL 476 Query: 477 VVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGE 533 ++ ++V N V+I+V D G G +++ G GL + R+K +YGE Sbjct: 477 IIKVNVESIDNYVKISVEDNGKGF--------KSSNKKGK--GLELIQKRLKSIYGE 523 >UniRef50_A6LJ91 Signal transduction histidine kinase, LytS n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LJ91_THEM4 Length = 552 Score = 214 bits (545), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 149/538 (27%), Positives = 280/538 (52%), Gaps = 27/538 (5%) Query: 6 NMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVP 65 N+ L + +R +L+L+ + + + + + +S + K + + I + T G+ Sbjct: 4 NISLILLERVSLILVITYIIFQTYFIKNIFGRSLVT-KNKMVIGFIGGFLGILGTLFGIR 62 Query: 66 VEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCIS 125 G++VN R I V+ G+L G GI+ I+ R + GG+TA+PCF+ ++ AG IS Sbjct: 63 YNGAIVNYRDIGVILSGMLAGVSGGIVAAFISASFRLFL--GGITAVPCFLGTLTAGIIS 120 Query: 126 GWINLKIPKAQ-RWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL-GSVC 183 G ++ + + + +L E + ++ V++ L DI KI PM++ ++ Sbjct: 121 GVLSEYYGRKHFTFFRTMYYTILIEIIHLMYVLLMVKPFYLAYDITFKILFPMVITNTLG 180 Query: 184 IGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDDIHAD 242 + F+ ++ ++E + + I + L N S + ++I ++ D Sbjct: 181 VSFLNFMMWNLEEKLQNVEENTISSIFVIMERILNTIEIGFNENSAILIAQVILENTDFD 240 Query: 243 AVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYG---KIIIKN--NDEAHRTPEI 297 AVA+T+ +++LA+VG+G+ ++ +G+ + T++ +N G K++ K N E P + Sbjct: 241 AVALTDKEYILAHVGIGDDHHISGEKIKTQATKKVINSGYGLKVVGKKGINCEKENCP-L 299 Query: 298 HSMLVIPLWE-KGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMA 356 S +VIPL G + GTLK+YY +H + + L+Q++S + +S + ++A Sbjct: 300 FSAIVIPLNNINGDLIGTLKLYYSKSHSMQNKDIIFGKKLAQVLSLIISISEINESLKLA 359 Query: 357 NKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDI 416 + ++R L S ++PHFLFN LNAI R P + I NLS LRY + ++ + + + Sbjct: 360 TEEKMRELMSNMSPHFLFNTLNAIKYISRREPQRVDKFIDNLSSLLRYTL-YENSKLVSV 418 Query: 417 KKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGK 475 + E+ K+Y+ + + RF DKL + +E+ IP ++QPLVEN+I HG++ GK Sbjct: 419 RNEVDFTKNYLELMKLRFEDKLNYEVKVAKELEEYLIPPFILQPLVENSIKHGMKG--GK 476 Query: 476 GVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGE 533 ++ IS+++ +++I V D G G +EM GLL + R+K+L+G+ Sbjct: 477 LLIRISISKSDKKIKICVEDNGKGF----------SEMKKTGKGLLLIKKRLKVLFGD 524 >UniRef50_B8G277 Signal transduction histidine kinase, LytS n=2 Tax=Desulfitobacterium hafniense RepID=B8G277_DESHD Length = 426 Score = 209 bits (531), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 128/382 (33%), Positives = 220/382 (57%), Gaps = 18/382 (4%) Query: 186 FIVLLVQSVEGEKEASAA--RQAKLALDIANKTLPLFRH-VNSESLRKVCEIIRDDIHAD 242 F +L ++E +K A A R A+L+ IAN+TLP R +N ++ + +II++ Sbjct: 34 FFLLYHLNLEYKKTARQATERNAELSFKIANQTLPYLRRGLNEQNAEYIAKIIQEIGQVA 93 Query: 243 AVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPE------ 296 AV+IT+ + LAY+GVG + GD ++ TR + G I + P Sbjct: 94 AVSITDCEKQLAYLGVGCDQHHPGDKILTRATRDVIQSGVYKIVRTQKELNCPRQNTCDC 153 Query: 297 -IHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREM 355 + + +++PL +G V GT+K+Y Q++S L +A+G++ ++ Q+E++ + ++ Sbjct: 154 PLAAAVIVPLKCQGEVVGTMKLYETKVGQLSSDLIRLAIGMADLLGIQIELAELDHQAKL 213 Query: 356 ANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQID 415 A +A+L ALQ++INPHF FN LN I ++ R +P+ +R+L+ +L+ + R ++ I Sbjct: 214 AAEAQLNALQAQINPHFFFNVLNTIIATSRTSPNRSRRLLIHLAEFFRKALK-SHGSLIT 272 Query: 416 IKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKG 474 +++E+ +K Y+ +E+ARFG KL +I EE ++ +P L +QPLVENA+ HGI G Sbjct: 273 LREEMSFVKTYLILEKARFGRKLHFKSEIPEELMDALVPRLSVQPLVENAVKHGITEKIG 332 Query: 475 KGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV-EANEMPGNKIGLLNVHHRVKLLYGE 533 GVV++ V + G + I V D G GI P+ ++ V + GN +G+ NVH R+ YG+ Sbjct: 333 NGVVSVKVEQKGQELYITVADDGVGIQPERLQEVLKPGVGSGNGVGMANVHERLIGHYGK 392 Query: 534 --GLHIRRLEP--GTEIAFYIP 551 GL I+ +P T + ++P Sbjct: 393 EYGLQIKS-QPNISTTVTMHLP 413 >UniRef50_C8VX85 Signal transduction histidine kinase, LytS n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VX85_DESAS Length = 446 Score = 208 bits (529), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 132/358 (36%), Positives = 207/358 (57%), Gaps = 12/358 (3%) Query: 208 LALDIANKTLPLFRH-VNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNG 266 + L IA++TLP R +N E+ EII+ DAVAIT+ + VLAY+G G +++ G Sbjct: 73 IELQIASETLPFMRRGLNVETAGSTAEIIKKISDVDAVAITDREKVLAYIGEGSDHHKPG 132 Query: 267 DDFISPTTRQAMNYG--KIIIKNNDEAHRTPE--IHSMLVIPLWEKGVVTGTLKIYYCHA 322 + ++ TR+A+ G K+I + D P + + +++PL G V GT+K+Y Sbjct: 133 GEILTYATRRAIITGEIKVIHNSRDINCSVPHCPLEAAVIVPLRCNGEVVGTVKMYRTKQ 192 Query: 323 HQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISS 382 ++ L ++AVG++Q++ Q+E++ ++ ++ AEL AL ++INPHFLFN LN I Sbjct: 193 GRMPDHLVKLAVGVAQMLDVQMELAELDRRAQLVAVAELDALHAQINPHFLFNTLNTIIM 252 Query: 383 SIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIY 442 R NP+TAR+L+ LS + R ++ K +K E+ I Y+ + +ARF +K+ V Sbjct: 253 FSRTNPETARRLLIRLSSFFRQALQRKGHFNT-LKGEIEYINTYLVLVRARFREKIRVRR 311 Query: 443 DIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGID 501 I E + +P L IQPLVENA+ HGI P +G G V+I+V + + I V D G GI Sbjct: 312 QIAHELLEYRVPVLTIQPLVENAVKHGIMPKEGAGTVSITVKMQNDELLIVVEDDGVGIS 371 Query: 502 PKVIERV-EANEMPGNKIGLLNVHHRVKLLYGEGLHIRRL-EPGTEIAFYIPNQRTPV 557 +I +V + GN +GL NVH R+K L+GE +R + +PG A Y+ R P+ Sbjct: 372 LDMIPKVLQPGYGSGNGVGLSNVHERLKNLFGEEYGLRIISKPGEGTAVYV---RVPI 426 >UniRef50_Q67QS2 Two-component sensor histidine kinase n=1 Tax=Symbiobacterium thermophilum RepID=Q67QS2_SYMTH Length = 477 Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 125/358 (34%), Positives = 201/358 (56%), Gaps = 15/358 (4%) Query: 209 ALDIANKTLPLFRH-VNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGD 267 +L I +T+P + +N ES +K+CEIIR DAVAIT+ +L + GVG ++ G Sbjct: 116 SLRIGEETMPYLKQGLNFESAQKICEIIRQITEMDAVAITDDKVILGFSGVGCRRHRQGG 175 Query: 268 DFISPTTRQAMNYGKIIIKNN------DEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCH 321 ++ TR + G+ + N+ DE + + ++ PL +G V GT K+Y Sbjct: 176 PILTGATRHVLETGEARVVNDPRVLSCDEPGCPHPLKAAVITPLKFRGKVVGTFKLYRAS 235 Query: 322 AHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAIS 381 + + + +A G++ ++ Q+E++ +E+ R++ +A L ALQ++I PHFLFN LN I Sbjct: 236 NAPVPTYVVRLAAGIAALLGIQMELAESERQRQLVVRARLEALQAQIRPHFLFNVLNTII 295 Query: 382 SSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVI 441 R +P+ +R+L+ +L+++ R ++ + + + EL I Y+++EQARFG+KL V Sbjct: 296 MFSRTDPERSRELLVSLAQFFRRSLTTRGNMNT-FQDELEYIHIYLSLEQARFGEKLRVK 354 Query: 442 YDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGI 500 +D V +P L +QPLVENA+VHG+ P + GVV I + G+ + I + D G G+ Sbjct: 355 MKVDPRVTGAMVPVLTLQPLVENAVVHGLAPKEDTGVVGIRARQVGSHLHILIADNGVGM 414 Query: 501 DPKVIERVEANEMPGNK--IGLLNVHHRVKLLYGEGLHIR-RLEP--GTEIAFYIPNQ 553 D + RV E GN +GL NV+ R+ LYG +R R P GT I IP Q Sbjct: 415 DRETQRRV-FEEGYGNNMGLGLTNVNERLISLYGPQYRLRIRSTPGRGTAIRLRIPLQ 471 >UniRef50_A6F874 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=A6F874_9GAMM Length = 515 Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 146/464 (31%), Positives = 254/464 (54%), Gaps = 32/464 (6%) Query: 54 LFALFSTWSGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIP 113 +F + ++ G+ ++VN R I + GG+ GP VG+ G+ GIHRY + GG T + Sbjct: 1 MFCMMGSYFGLQYGDAIVNTRAIGAVMGGLFGGPVVGLAVGMTGGIHRYFM--GGFTDLA 58 Query: 114 CFITSILAGCISGWINL------KIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGI 167 C I++ + G I G +++ KI + + L + E M +++V A Sbjct: 59 CAISTSVEGLIGGLLHVYLLRKNKIHYIFKPHIIFLVTLFAELTQMAILLVVAKPYEQAY 118 Query: 168 DIVSKIGIPMILGSVCIGFIVLLVQSVEGEK---EASAARQAKLALDIANKTLPLFRH-V 223 +VS +PMI + IG VL + +E K E + ++ AL IA++++ + + Sbjct: 119 ALVSVAALPMITAN-TIG-AVLFMSIIEDRKSIFEKYSTAFSQRALRIADRSVGILSQGL 176 Query: 224 NSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGE-HNYQNGDDFISPTTRQAMNYGK 282 N ES + + II ++ + A+AIT+T+++LA++G+GE H++ N IS +QA++ + Sbjct: 177 NPESAKTIANIIYEETNVGAIAITDTNNILAFIGIGEQHHHVNVP--ISSYIQQAIDENR 234 Query: 283 IIIKNN---------DEAHRTPEIHSMLVIPLWE-KGVVTGTLKIYYCHAHQITSSLQEM 332 II N+ D+ R + S ++PL V GT+K+Y +++ M Sbjct: 235 IIDLNSTTNTYQCSIDDKCR---LGSAFILPLRNGDNKVVGTIKLYEPRRKLLSNINISM 291 Query: 333 AVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTAR 392 A G++Q++S+Q+ + +Q + + +AEL+ L +++NPHFLFNAL IS+ R PD AR Sbjct: 292 AEGIAQLLSSQILLGHYQQQQTLLTQAELKLLHAQVNPHFLFNALTTISAVTRREPDKAR 351 Query: 393 QLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCC 451 LI +L+++ R N++ ++ E + +++EL + Y+ IEQAR ++L+V +I E ++ Sbjct: 352 MLIQHLAQFFRKNLK-QNIESVSLREELSHVNAYLTIEQARLTNRLSVSINIAPELMDIK 410 Query: 452 IPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRD 495 +PS +QPL+ENAI HGI G + I RI V D Sbjct: 411 LPSFTLQPLIENAIKHGISTMLSAGKLEIYSQITPEGPRIFVTD 454 >UniRef50_P0AD15 Inner membrane protein yehU n=287 Tax=root RepID=YEHU_ECOL6 Length = 561 Score = 202 bits (513), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 152/516 (29%), Positives = 274/516 (53%), Gaps = 24/516 (4%) Query: 5 FNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGV 64 FN++L + + + L+ + + + LF L+ + P + L +FS+F + TW G+ Sbjct: 4 FNLVLLLLQQMCVFLVIAWLMSKTPLFIPLMQVTVRLPHKFLCYI-VFSIFCIMGTWFGL 62 Query: 65 PVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCI 124 ++ S+ N R I + GG+L GP VG + G+ G+HRY +GG+TA+ C I++I+ G + Sbjct: 63 HIDDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRY--SMGGMTALSCMISTIVEGLL 120 Query: 125 SGWI-NLKIPKAQRWRV--GILGG---MLCETLTMILVIVWAPTTALGIDIVSKIGIPMI 178 G + ++ I + + +V I G + E + M++++ A + +VS I PM+ Sbjct: 121 GGLVHSILIRRGRTDKVFNPITAGAVTFVAEMVQMLIILAIARPYEDAVRLVSNIAAPMM 180 Query: 179 LGSV---CIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VNSESLRKVCEI 234 + + + +LL + EK SA + AL +A T + R N + KV ++ Sbjct: 181 VTNTVGAALFMRILLDKRAMFEKYTSAF--SATALKVAASTEGILRQGFNEVNSMKVAQV 238 Query: 235 IRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEA--- 291 + ++ AVAIT+ + +LA+ G+G+ ++ G S T +A+ G+++ + +E Sbjct: 239 LYQELDIGAVAITDREKLLAFTGIGDDHHLPGKPISSTYTLKAIETGEVVYADGNEVPYR 298 Query: 292 ---HRTPEIHSMLVIPL-WEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVS 347 H ++ S LVIPL E V GT+K+Y +S + + G++Q++S Q+ Sbjct: 299 CSLHPQCKLGSTLVIPLRGENQRVMGTIKLYEAKNRLFSSINRTLGEGIAQLLSAQILAG 358 Query: 348 RAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIE 407 + E+ + M ++E++ L +++NPHFLFNALN I + IR + + A QL+ LS + R N++ Sbjct: 359 QYERQKAMLTQSEIKLLHAQVNPHFLFNALNTIKAVIRRDSEQASQLVQYLSTFFRKNLK 418 Query: 408 LKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIV 466 + E + + E+ + Y+ IE+ARF +L V I +E++ +P+ +QP+VENAI Sbjct: 419 -RPSEFVTLADEIEHVNAYLQIEKARFQSRLQVNIAIPQELSQQQLPAFTLQPIVENAIK 477 Query: 467 HGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 HG G V IS G + + + D P Sbjct: 478 HGTSQLLDTGRVAISARREGQHLMLEIEDNAGLYQP 513 >UniRef50_Q2RGH9 ATP-binding region, ATPase-like n=2 Tax=Clostridia RepID=Q2RGH9_MOOTA Length = 455 Score = 197 bits (501), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 116/356 (32%), Positives = 199/356 (55%), Gaps = 15/356 (4%) Query: 210 LDIANKTLPLFRH-VNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDD 268 L IA++TLP+ R +N + K +II+D A+AIT+ + VL ++GVG +Q GD Sbjct: 77 LQIADQTLPVLRGGLNKTTAAKTADIIQDLTQVPAIAITDRERVLTFLGVGCDQHQAGDR 136 Query: 269 FISPTTRQAMNYGKIIIKNNDEAHRTPE--------IHSMLVIPLWEKGVVTGTLKIYYC 320 ++ T++ + G++ + + + P + S +++PL + + G LK+Y Sbjct: 137 ILTEATKEVIATGRMKVVHTPQGLCCPRYGTGCNCPLKSAVIVPLKCRDEIVGALKLYQT 196 Query: 321 HAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAI 380 + +AVGL+ ++S Q+E+S ++ R++ +A L AL ++INPHF FN LN I Sbjct: 197 REGVFQPEIVRLAVGLANLLSLQIELSELDRQRQLLTEARLEALNAQINPHFFFNTLNTI 256 Query: 381 SSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTV 440 S R +P+ AR+L+ L++ R + + +++EL ++ Y+ +E+ARFG+K Sbjct: 257 ISFSRTDPERARRLLIRLAKLFRQTLS-RHGSLTTLQEELDCVRTYLVLEKARFGNKFRY 315 Query: 441 IYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHG 499 + D+ E + IP L +QPLVENA+ HG+ +G+G V +S G+ + +AV+D G G Sbjct: 316 LEDVPPELLEYHIPVLSLQPLVENAVNHGLLAKEGRGTVKVSGRLAGHELHLAVKDDGVG 375 Query: 500 IDPKVIERV-EANEMPGNKIGLLNVHHRVKLLYGEGLHIRRLE---PGTEIAFYIP 551 I + I V + GN +GL NV+ R + LYGE +R + GT + +P Sbjct: 376 IPAEKINLVTQPGYGSGNGVGLSNVNLRFQSLYGEDYGLRLMSEVGKGTTVILRVP 431 >UniRef50_D0WHA5 Regulatory protein LytS n=2 Tax=Coriobacteriaceae RepID=D0WHA5_9ACTN Length = 429 Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 112/338 (33%), Positives = 189/338 (55%), Gaps = 10/338 (2%) Query: 203 ARQAKLALDIANKTLPLFRH-VNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEH 261 A+Q+ L IA++TL ++ V ES +++C ++ A AVAIT+ +H+L Y G E Sbjct: 66 AQQSDTILRIASQTLECLQNGVTIESAQRICRLLLPATSARAVAITDREHILGYSGDQEI 125 Query: 262 NYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPE----IHSMLVIPLWEKGVVTGTLKI 317 + G + T + GK + + EA P + + +++PL + GTLK+ Sbjct: 126 SNPGGSPIRTKATHATLKDGKTRVLSTPEAIGFPSSVKNLRAGIIVPLRRGEAIVGTLKL 185 Query: 318 YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNAL 377 Y+ A I + +A GL +++STQ+ +Q ++A ELRALQS+INPHFLFN + Sbjct: 186 YFRRARNINETQLALAEGLGELLSTQIAAVELDQQVKLATAMELRALQSQINPHFLFNTI 245 Query: 378 NAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARF-GD 436 N I+S R +PD AR L+ + + R +E D I++ +E+ Q + Y A E ARF GD Sbjct: 246 NTIASLTRTDPDRARVLLREFAVFYRRTLEDAQD-MIELDREMDQTQRYFAFELARFGGD 304 Query: 437 KLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRD 495 +L + +++ + + +P+ LIQPLVENA+ H + P +G + + G+ I+V D Sbjct: 305 RLNLQVEVEPGLEDFLVPAFLIQPLVENAVKHAM-PDQGMLHIVVRAESDGDDAIISVSD 363 Query: 496 TGHGIDPKVIERVEAN-EMPGNKIGLLNVHHRVKLLYG 532 G G++P+ ++E + E G I + N+ R+++ +G Sbjct: 364 DGVGMEPEQSRKLEQSPESRGTGIAMKNITERLRVFFG 401 >UniRef50_C9LQU0 Sensor protein LytS n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQU0_9FIRM Length = 565 Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 151/543 (27%), Positives = 262/543 (48%), Gaps = 37/543 (6%) Query: 27 RIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPVEGSLVNVRIIAVMSGGILFG 86 R ++FR L + ++ +E + T IF++ L T+ G ++ R + +M G + G Sbjct: 33 RTKIFRNALSQERYTKREYIIFTVIFTILGLCGTFWNFRTPGGIMTFRAVPIMLSGFIGG 92 Query: 87 PWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISGWINLKIPK--AQRWRVGILG 144 P VG ITG+I GI+R I + TA SIL G +G ++ +I K +QRW + Sbjct: 93 PIVGTITGLIVGINRIFI-LQTATAPINGGLSILQGIAAGLLSPQIKKHSSQRWMWALFY 151 Query: 145 GMLCETLTMIL--VIVWAPTTALGIDIVSKIGIPMILGSVCIGFIVLLVQSVEGEKEASA 202 + E + + ++ W D++S + ++ + + + ++++ ++++ Sbjct: 152 SIGIEIVYWLFYALLTWPYAYINTKDLLSLVVPIIVTNTPAVALFIGVLEATTRQQDSEK 211 Query: 203 ARQAKLALDIANKTLPLFRHVNSES----LRKVCEIIRDDI-HADAVAITNTDHVLAYVG 257 AK A + AN L + ++ E+ K II + H AI D+V Sbjct: 212 TETAKTAFNSANM---LIQTIHDEAHGFDFSKTPRIITTALPHLIWSAIITNDNVFI--- 265 Query: 258 VGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKI 317 NY+N P + + I+ P + + + +G +I Sbjct: 266 --STNYKN------PRNQSQGDAETSILLLQKTLPSMPHLLQLRI-----EGKTKTICRI 312 Query: 318 YYCHAHQ--ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFN 375 + + ++ + +E G ++II E ++ + + +AE+RALQ++INPHFL+N Sbjct: 313 FASNPTDTPLSKTDKEFLNGTARIIELIHEHEELKKEKLLLQEAEIRALQAQINPHFLYN 372 Query: 376 ALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFG 435 LN I+ +R +PD AR L+ LS Y R+ + + I + +E+Y I Y+ +E+ARF Sbjct: 373 TLNTINFYVRSDPDIARNLLKYLSDYFRHTLN-NPSKMILLSEEIYDITCYVELERARFS 431 Query: 436 DKLTVIYDIDEEV--NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAV 493 D+L + Y I E IP LL+QPLVENAI+HGI G + + + E + +I V Sbjct: 432 DRLQIEYRIPLEKMKKIQIPPLLLQPLVENAIIHGILKKPEGGKIIVGLHEHPHLYKIFV 491 Query: 494 RDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEG--LH-IRRLEPGTEIAFYI 550 DTG GI + ++ + + IGL+NVH R+ ++GE LH I R GT + I Sbjct: 492 ADTGVGIPQDKLGKLLTSHKRRDNIGLINVHQRLLSIFGEKSRLHIISRTGKGTVVYIII 551 Query: 551 PNQ 553 P + Sbjct: 552 PKE 554 >UniRef50_B6GAE7 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6GAE7_9ACTN Length = 466 Score = 181 bits (459), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 111/328 (33%), Positives = 176/328 (53%), Gaps = 20/328 (6%) Query: 223 VNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYG- 281 + ES ++C + + A +A+T+ D VLA VG ++ G +PTTR + +G Sbjct: 110 LTRESAEEICRRLLPETRAMTIAVTDRDVVLACVGELADDFPAGSPIHTPTTRYVIEHGI 169 Query: 282 ----KIIIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLS 337 ++ E I + ++ PL +G GTLK YY A + + +A G + Sbjct: 170 AQSFTSVMDVRGEKGSQRNIPAGIIAPLKIRGKAVGTLKFYYRSARHVNRTQYALASGFA 229 Query: 338 QIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFN 397 +++STQL V E+ E+ +AE+RALQ++INPHFLFN LN I+S R +P AR+L+ Sbjct: 230 ELLSTQLTVYELERQAELTARAEVRALQAQINPHFLFNTLNTIASFTRTDPLRARELLRE 289 Query: 398 LSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFG-DKLTVIYDIDEEV-NCCIPSL 455 S++ R +E + I +K+E+ Q Y+ E+ARFG D++ V D+DE+ IP+ Sbjct: 290 FSQFYRATLE-NSGQLIPVKREIAQTLRYLTFEKARFGEDRVLVSVDVDEDAEEVLIPAF 348 Query: 456 LIQPLVENAIVHGIQPCKGKGVVTISVAECGN-RVRIAVRDTGHGIDPKVIERV------ 508 +IQPLVENA+ H + P +G ++I+V G V I V D G G+D + R+ Sbjct: 349 VIQPLVENAVRHAM-PDEGALKISITVERAGEAAVSIRVADDGMGMDEQTAMRLFDRSIA 407 Query: 509 ----EANEMPGNKIGLLNVHHRVKLLYG 532 A + G + + N+ R+K YG Sbjct: 408 APDPNAPQGGGAGVAMHNISERIKRFYG 435 >UniRef50_C8WPP3 Signal transduction histidine kinase, LytS n=2 Tax=Coriobacteriaceae RepID=C8WPP3_EGGLE Length = 438 Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 128/406 (31%), Positives = 209/406 (51%), Gaps = 27/406 (6%) Query: 150 TLTMILVIVWAPTTALGIDIVSKIGIP------MILGSVCIGFIVLLVQSVEGEKEASAA 203 TL M + V A + G+ ++ I +P M+ V +++V + + ++ A Sbjct: 17 TLEMFMFTVTALS---GLVLLWSIAVPYRNVAIMVCAGVVFTLSIVVVIRLIMDPDSVRA 73 Query: 204 RQAKLALDIANKTLPLFRH-VNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHN 262 RQ+ L +A++TL ++ ++ +K+C ++ A AVAIT+ +L Y G E Sbjct: 74 RQSDSMLKLASQTLTCMNDGMDYKAAQKICGLLLPSTAAIAVAITDKKQILGYAGFEEAQ 133 Query: 263 YQNGDDFISPTTRQAMNYGKIIIKNNDE----AHRTPEIHSMLVIPLWEKGVVTGTLKIY 318 G + T + GK+ I E + I + +++PL V GTLK Y Sbjct: 134 NLPGSIIRTHATHATLADGKLRILFTPEDIGFPSESSNIKAAIIVPLAIGRNVEGTLKFY 193 Query: 319 YCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALN 378 Y A I+ + + +A G +++STQ+ S E+ ++A + EL+ LQS+INPHFLFN +N Sbjct: 194 YRRAKHISETQKSIAEGFGKLLSTQMAASALEEQTQLATRMELKMLQSQINPHFLFNTIN 253 Query: 379 AISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFG-DK 437 I+S IR +P+TAR+L+ + + R +E D I +E+ Q K Y E ARFG D+ Sbjct: 254 TIASLIRTDPETARKLLREFAVFYRRTLEDSAD-LIVFAREMEQTKRYFTFEVARFGADR 312 Query: 438 LTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 + + ID V + +P L+QPLVENA+ H + P +GK + ++ GN V + V D Sbjct: 313 VEMEMRIDPRVEDMLVPPFLLQPLVENAVRHAM-PSEGKLTIEVTGEVTGNDVIVRVCDN 371 Query: 497 GHGIDPKVIERVEANEM-PGNKIGL----LNVHHRVKLLYGEGLHI 537 G G+ E N + P + +GL NVH R+ +G G H+ Sbjct: 372 GVGM----TEEARCNILHPESSLGLGIAVKNVHDRICGYFGPGTHM 413 >UniRef50_C8W8F7 Signal transduction histidine kinase, LytS n=3 Tax=Atopobium RepID=C8W8F7_ATOPD Length = 433 Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 110/377 (29%), Positives = 197/377 (52%), Gaps = 29/377 (7%) Query: 187 IVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VNSESLRKVCEIIRDDIHADAVA 245 +++L + + E + +++ + L++A+KTL R ++ E+ +C ++ + A A++ Sbjct: 36 VIVLGGTTQPGNEHTRSQETERTLEVASKTLKTLRGGLSQETAPTICTLLLSETSAAAIS 95 Query: 246 ITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKI-----------IIKNNDEAHRT 294 IT+T++VL + G + G + P T + + G++ ++K Sbjct: 96 ITDTEYVLGFEGDIATAHVPGSKVVGPAT-EVLESGRMETFVSVDSRQQVLKRRGGFGNG 154 Query: 295 PEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLRE 354 +++PL + GT+K+YY +I + +A GL +++STQL ++ E Sbjct: 155 -GSSFGIIVPLIVQDRPVGTIKLYYRRGIEIDRTQLAIAEGLGELLSTQLSSYELDRQAE 213 Query: 355 MANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQI 414 + +AE++ALQ++INPHFLFN LN I+S R NP+ AR L+ S + R +E I Sbjct: 214 LTARAEVKALQAQINPHFLFNTLNTIASLTRTNPNKARDLLREFSVFYRRTLESSQGSLI 273 Query: 415 DIKKELYQIKDYIAIEQARFG-DKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPC 472 + +EL Q + Y+ IE+ARFG +++ +DE + +PS LIQP+VENA+ H ++ Sbjct: 274 PLSQELTQTRRYLTIEKARFGEERIQESEHVDEGCEDIQVPSFLIQPIVENAVRHAMKD- 332 Query: 473 KGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMP----------GNKIGLLN 522 +G + I VA + + I+V D G G+D + + R+ + P G I + N Sbjct: 333 EGALHIDIHVARDEDDILISVADDGLGMDEETVSRLLNGQGPTPHNSSGRSEGTGIAIKN 392 Query: 523 VHHRVKLLY--GEGLHI 537 V R + Y G G+ I Sbjct: 393 VAERAERFYAAGSGMEI 409 >UniRef50_D2B6F5 Signal transduction histidine kinase, LytS n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B6F5_STRRD Length = 394 Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 121/386 (31%), Positives = 191/386 (49%), Gaps = 23/386 (5%) Query: 181 SVCIGFIVLLVQSVEGEKEASAARQAKLA-LDIANKTLPLFRH-VNSESLRKVCEIIRDD 238 S +GF++ + A +A A L I P R + +S RK +R Sbjct: 14 STFLGFVLSRRRPASPRHPAGLPDEATFATLHITALAAPSLRAGLTRDSARKAIRHLRTL 73 Query: 239 IHADAVAITNTDHVLAYVGV-GEHNYQNGDDFISPTTRQAMNYGKIIIKNNDE-AHRTP- 295 + A+A+T+ D VLA+ G G H D R + G+ + D A TP Sbjct: 74 LGVSAIAVTDADGVLAWDGAAGCHR-----DHAPEHARTVFSSGRPYVVAGDAIACDTPG 128 Query: 296 -EIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLRE 354 I V+PL G V G L Y ++++ L +++ +S QLE++ + R Sbjct: 129 CAIRGAAVVPLTVDGRVIGALAAYDT---EVSAGLVRTVTEVARWVSGQLELAELDSSRR 185 Query: 355 MANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQI 414 A +AE RAL+++I+PHF++N+L I+S +R +P+ AR+L+ + + + R+ + D Sbjct: 186 RAMEAETRALRAQISPHFVYNSLTTIASFVRTDPERARELLMDFADFTRHALRRGGDFTT 245 Query: 415 DIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCK 473 + EL + Y+ +E+ARFG++L + EV +P L +QPLVENAI HGI Sbjct: 246 -LADELRCVDRYLLLERARFGERLRFTVRVAPEVLPVPVPFLCLQPLVENAIKHGIAATG 304 Query: 474 GKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV---EANEMPG-NKIGLLNVHHRVKL 529 G G V + V + G I+V D G G+DP R+ + + PG IGL NV R++ Sbjct: 305 GSGEVRVVVRDAGPEAHISVEDDGLGMDPGRARRLLDDDPCQGPGEGGIGLANVDVRLRQ 364 Query: 530 LYGEGLHI---RRLEPGTEIAFYIPN 552 +YGEG + L GT+I +P Sbjct: 365 IYGEGYGLVVETALGAGTKIRLRVPK 390 >UniRef50_A4E9W6 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W6_9ACTN Length = 447 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 103/335 (30%), Positives = 169/335 (50%), Gaps = 22/335 (6%) Query: 223 VNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYG- 281 + ES R VC I + A VAIT+ D+VLA G E + TR + +G Sbjct: 90 LTQESARLVCRRILPETRAMTVAITDEDNVLACAGEFEEKLLPDTPIHTLATRYVIEHGI 149 Query: 282 ------KIIIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVG 335 + + +D +H ++ + ++ P+ GTLK YY + + +A G Sbjct: 150 VQSFNRMVDVVGSDGSHN--QVPAGIIAPIKVGDRTVGTLKFYYKTPRAVDRTQYALASG 207 Query: 336 LSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLI 395 ++I+STQL + E +E+ +AE+RALQ++INPHFLFN LN I+S R +P AR+L+ Sbjct: 208 FAEILSTQLAIHELEVQKELTARAEVRALQAQINPHFLFNTLNTIASFTRTDPLRARELL 267 Query: 396 FNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFG-DKLTVIYDIDEEV-NCCIP 453 S + R ++ I + +E+ Q K Y+ E+ARFG D++ +D+ E+V + +P Sbjct: 268 REFSSFYRATLD-NSGSLIPVSREVAQTKRYLTFEKARFGEDRVLATFDVSEDVEDTLVP 326 Query: 454 SLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV--EAN 511 + +IQP+VENA+ HG+ + + + + IAV D G G+D R+ E + Sbjct: 327 AFVIQPIVENAVRHGMGDDDALRIDVTVHQDGEDAILIAVADNGVGMDEGTAARLFDERS 386 Query: 512 EMP--------GNKIGLLNVHHRVKLLYGEGLHIR 538 P G + + N+ R+ YG + R Sbjct: 387 ARPDASSPQGGGAGVAMHNISERIHRFYGPHSYTR 421 >UniRef50_C5RQ55 Signal transduction histidine kinase, LytS n=2 Tax=Clostridium cellulovorans 743B RepID=C5RQ55_CLOCL Length = 640 Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 81/209 (38%), Positives = 127/209 (60%), Gaps = 2/209 (0%) Query: 345 EVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRY 404 + ++A E K+ELR LQ++I PHFLFN LN I R + + A +L+ NLS YLR Sbjct: 425 KFAKAFFHEEQLLKSELRMLQAQIKPHFLFNTLNTIICVCRESSEKAEELLLNLSNYLRC 484 Query: 405 NIELK-DDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVEN 463 K DDE D++ EL +K Y+ IE+ARF DKL +I+DID ++C +P+ +IQP+VEN Sbjct: 485 GFSFKNDDEFADLETELLHVKSYLHIEKARFLDKLNIIFDIDTNIHCKVPAYIIQPIVEN 544 Query: 464 AIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNV 523 ++ HGI PCK G V ++V + N + I V D G G+ + + + + IG+ N+ Sbjct: 545 SVRHGILPCKDGGTVRLTVKKNNNMLIIIVEDDGVGMTEEKLTALLNSSDKKAGIGISNI 604 Query: 524 HHRVKLLYGEGLHIRRLEP-GTEIAFYIP 551 +R++ +YG+ + I+ + GT + +P Sbjct: 605 QNRIQRIYGKSIKIKSTKGIGTIVTLELP 633 >UniRef50_C6WDP3 Signal transduction histidine kinase, LytS n=2 Tax=Pseudonocardineae RepID=C6WDP3_ACTMD Length = 428 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 121/374 (32%), Positives = 191/374 (51%), Gaps = 29/374 (7%) Query: 199 EASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIHADAVAITN-TDHVLAYVG 257 +ASA + L + A+K P R E LR V AV IT+ T VL++ G Sbjct: 61 KASADLREGLTAEAADKATPHLR----EMLRCV-----------AVGITDSTGSVLSWDG 105 Query: 258 VGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKI 317 +Y+ I R+ K + + +HS +++PL + V GTL + Sbjct: 106 GAADHYELMRGHIEQAIREVHKEHVEHRKLDCDLSGPCPMHSAVIVPLIVESEVAGTLIV 165 Query: 318 YYC--HAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFN 375 + QI MA ++ +STQLE+ ++ R+ +AE+RAL+++I+PHF++N Sbjct: 166 VSGVPNKRQI-----RMAEETARFVSTQLELEVLQKSRQALAQAEVRALRAQISPHFVYN 220 Query: 376 ALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFG 435 ALN ISS IR +P AR+L+ + + RY+ D + EL I Y+ IEQAR+G Sbjct: 221 ALNTISSLIRTDPVYARELLQEFAEFTRYSFR-TDGFFTTLSDELTNIHRYLTIEQARYG 279 Query: 436 DKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVR 494 +L V I EV +P L +QPLVENA+ HG+ G G++TI+ + G I+V Sbjct: 280 ARLEVRLRIAPEVLQVVLPFLCLQPLVENAVRHGLAKKPGGGMLTITAEDNGAEALISVE 339 Query: 495 DTGHGIDP-KVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYI 550 D G G+DP ++ E ++ G +GL N++HR++ ++G+ + E G +I + Sbjct: 340 DDGVGMDPERLFEDLKDAHQTGAHVGLGNINHRMRAVFGDDYALVVETAPEAGMKIILKV 399 Query: 551 PNQRTPVASQATLL 564 P R V TL+ Sbjct: 400 PKYRQGVRPNLTLV 413 >UniRef50_A4E9X1 Putative uncharacterized protein n=2 Tax=Collinsella RepID=A4E9X1_9ACTN Length = 484 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 122/394 (30%), Positives = 188/394 (47%), Gaps = 29/394 (7%) Query: 177 MILGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLF-RHVNSESLRKVCEII 235 +I G V + F V V + +SA + L IA+K R + E+ +II Sbjct: 80 VIAGLVMLCFFFSYVFLVPDDLTSSATDRT---LAIASKIFAYTSRGLTPEAALGASKII 136 Query: 236 RDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRT- 294 + A A+ T+ VLA G G + TT +N G+ + + D + T Sbjct: 137 LSETTASAICFTDGKQVLASWGEDSAKCPAGTPVVLRTTLNVINSGEQSVFSRDASTETG 196 Query: 295 ---PEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQ 351 P + + +V PL +G GTL++YY I +A G + +ISTQL E+ Sbjct: 197 GYFPRLRAGIVAPLTVRGHCVGTLELYYPRLSSIDMRQTALASGFADLISTQLASFELER 256 Query: 352 LREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDD 411 E+ + ELRALQS+++PHFLFN ++ I S +R PD AR L+ + S Y R + D Sbjct: 257 QDELTARVELRALQSQVDPHFLFNTISTIVSLVRTEPDKARSLLIDFSNYYRQTLS-DSD 315 Query: 412 EQIDIKKELYQIKDYIAIEQARFGD-KLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGI 469 ++ E+ Q YI + QAR+GD +L V DID EV +C +P ++QPL+EN I H Sbjct: 316 TLTTLEHEVEQGTRYINLMQARYGDGRLRVSVDIDFEVRDCMVPPFILQPLLENCIKHAQ 375 Query: 470 QPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVI------ERVEANE--------MPG 515 + + + + E + + I V D G G+ +V R+E E G Sbjct: 376 RETEPLS-IHVRAFETDDGLEIIVEDDGIGMSEEVCAHLFEQHRLEEPESITADGSVKRG 434 Query: 516 NKIGLLNVHHRVKLLYGE--GLHIRRLEP-GTEI 546 + L NV R+ YGE G+ ++ E GT++ Sbjct: 435 CGLALFNVLQRIHFFYGEDSGMRVKSQEGVGTQV 468 >UniRef50_UPI0001B586EC signal transduction histidine kinase, LytS n=2 Tax=Actinomycetales RepID=UPI0001B586EC Length = 434 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 99/318 (31%), Positives = 172/318 (54%), Gaps = 16/318 (5%) Query: 243 AVAITNTD-HVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEA--HR-TPEIH 298 AV IT+++ +L++ G +Y + D I R+ + + + +N HR T ++ Sbjct: 81 AVGITDSEGTLLSWAGEATDHYLDVVDDIGTALRK---HRRAVADHNKMPCNHRGTCKMK 137 Query: 299 SMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANK 358 + ++P+ +G TL + + L +MA + Q + TQ E++R E+ R + Sbjct: 138 TAAIVPILVEGEAEATLIV----VGRTRGKLVQMAEAVGQFVCTQFELARLEESRNQLQQ 193 Query: 359 AELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKK 418 AE++AL+++I+PHF++NALN IS+ IR +P+ AR+L+ + + + RY+ + + Sbjct: 194 AEIKALRAQISPHFVYNALNTISALIRTDPEEARELLQDFADFTRYSFRTS-GMYTTLAE 252 Query: 419 ELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGV 477 EL I Y+ IE ARFG +L V I EV + +P L+IQPLVENA+ HG+ G Sbjct: 253 ELRNIDRYLTIENARFGGRLEVRMKIAPEVLSVVVPFLIIQPLVENAVKHGLASKPSGGC 312 Query: 478 VTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI 537 VT+ + G+ I V D G G+DP+ + + G +GL N++ R++ ++GE + Sbjct: 313 VTVIARDDGHEALITVEDDGIGMDPRQLTDLRNAHRTGAHVGLGNINQRMRQVFGEDYAL 372 Query: 538 R-RLEPGT--EIAFYIPN 552 PG ++A +P Sbjct: 373 TVETAPGAGMKVALRVPK 390 >UniRef50_C5RJD6 Sensor protein n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJD6_CLOCL Length = 1028 Score = 152 bits (383), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 84/241 (34%), Positives = 136/241 (56%), Gaps = 12/241 (4%) Query: 322 AHQITSSLQEMAVGLSQIISTQLEV----SRAEQLREM------ANKAELRALQSKINPH 371 ++Q + +Q G + + EV +R + L E+ A E+ LQ++I PH Sbjct: 788 SNQPKTVIQAFKEGANDFLYKPFEVDELLARTKTLTELKKSVIKAFDMEMAFLQAQIKPH 847 Query: 372 FLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQ-IDIKKELYQIKDYIAIE 430 FLFN +N I + NP+ A +L+ S YLR + + ++ EQ I ++KE+ + Y+ +E Sbjct: 848 FLFNVINTIVALCDDNPEEASELLIEFSSYLRSSFDFRNLEQAIALEKEIEYVNSYLKLE 907 Query: 431 QARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVR 490 +ARFG+KLT+ +DID+ + IP L+IQPLVENA+ HG+ G V +S+ E + Sbjct: 908 KARFGEKLTIEFDIDDSIKAKIPPLVIQPLVENAVKHGVMKKSEGGTVRLSIKETNGEIN 967 Query: 491 IAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRRLE-PGTEIAFY 549 ++V+D G GI +++ + N+ +G+ N+ R+K + G GL I E GTEI F Sbjct: 968 VSVKDDGVGISKDILQGILKNDSKRRSVGVKNIDKRLKRISGRGLQINSNEGEGTEIQFS 1027 Query: 550 I 550 I Sbjct: 1028 I 1028 >UniRef50_A6LQW2 Signal transduction histidine kinase, LytS n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LQW2_CLOB8 Length = 397 Score = 151 bits (381), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 87/204 (42%), Positives = 127/204 (62%), Gaps = 11/204 (5%) Query: 351 QLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKD 410 +L+E AEL+AL+++I PHFLFN+LN IS+ R + + AR+LI NLS Y R +E++ Sbjct: 201 KLKEENKVAELKALKAQIEPHFLFNSLNVISAYCRTDGEKARELILNLSNYFRATLEIEG 260 Query: 411 DEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGI 469 D +KKEL IK Y+AIEQARF ++L V + ID+ ++ P L++QP+VEN+I HGI Sbjct: 261 DFS-TLKKELALIKAYVAIEQARFSNRLEVKFLIDDNLLDIKFPILVLQPIVENSIKHGI 319 Query: 470 QPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKL 529 G+VTIS+ N V I + D G G + A+E +GL N+++R++L Sbjct: 320 LKKINGGIVTISIRNDENDVSIEISDNGVGFE-------NADESLSTGLGLKNINNRLRL 372 Query: 530 LYGE--GLHIRRLEPGTEIAFYIP 551 LYGE L+I G+ + F IP Sbjct: 373 LYGESYSLNIVSSNNGSSVNFNIP 396 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 108/198 (54%), Gaps = 10/198 (5%) Query: 7 MLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPV 66 +++ + +R AL+ I ++ +++ + + + K K+ + + IFSL A+ T+ G+ + Sbjct: 2 LMVNMLERMALITIFIYVILQTNIMKCFV-KDKFDRKDNIMMILIFSLLAILGTYFGIYI 60 Query: 67 -EGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCIS 125 + SL N R + + G L GP +GII G I+G+HRY GG TA+ C +++I+ G I Sbjct: 61 KDQSLANSRPVGAIVAGYLGGPVIGIIVGFISGLHRY--SFGGFTALACGLSTIVEGAIG 118 Query: 126 GWINLKI-PKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL-GSVC 183 G + K V L ++ E MI++++++ ID+ I + MIL S+ Sbjct: 119 GGFRILFKKKGLNPAVAGLAAVVAEITQMIIILMFSKDINSAIDLEKTIALSMILINSIG 178 Query: 184 IGFIVLLVQS----VEGE 197 + IV++++S V+GE Sbjct: 179 VFLIVMVIESSKKLVDGE 196 >UniRef50_B8FU12 Signal transduction histidine kinase, LytS n=2 Tax=Desulfitobacterium hafniense RepID=B8FU12_DESHD Length = 645 Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 80/208 (38%), Positives = 122/208 (58%), Gaps = 3/208 (1%) Query: 359 AELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKD-DEQIDIK 417 AE+ L+S+I PHFL+NALN+I++ + PD A ++ LS YLR + + K D +K Sbjct: 438 AEIAFLRSQIKPHFLYNALNSIAALCKEAPDQAEDVVIQLSEYLRGSFDFKTLDSLTTVK 497 Query: 418 KELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGV 477 KE ++ Y+ IE+ RFG +L V YDIDE +N IP L++QPLVENA+ HG+ G Sbjct: 498 KETELLEAYLNIEKVRFGKRLNVEYDIDESINFPIPPLILQPLVENAVRHGLMSGVSGGT 557 Query: 478 VTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI 537 V IS+ + V ++ D G G++P ++R+ N +GL N++ R++L+YG L + Sbjct: 558 VKISIKKEMANVVFSIEDDGIGMEPSQVKRLLEQAPDENGVGLWNINQRLRLIYGNELEV 617 Query: 538 -RRLEPGTEIAFYIP-NQRTPVASQATL 563 GT ++F +P N R S L Sbjct: 618 WSERGVGTRVSFQLPWNSRETSLSHGNL 645 >UniRef50_C9NAB2 Signal transduction histidine kinase, LytS n=6 Tax=Streptomyces RepID=C9NAB2_9ACTO Length = 408 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 101/334 (30%), Positives = 176/334 (52%), Gaps = 26/334 (7%) Query: 242 DAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSML 301 DA+ +T+ D VL + G G+H+ ++ + + G+ ++D + + Sbjct: 80 DALCLTDRDRVLVWDGEGDHHGKD----VMEQVEGLLASGRDTAFHSDCGDLDCTLRWAV 135 Query: 302 VIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAEL 361 +PL V GTL Y A + ++ L A +++ + QLE++ ++ R +AE+ Sbjct: 136 AVPLTVDHRVLGTLVAY---APRESAVLARAAGEVARWVCVQLELAELDRSRTQIVEAEI 192 Query: 362 RALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELY 421 +AL+++I+PHF+FN+L AI+S +R +P+ AR+L+ + + RY+ + E + EL+ Sbjct: 193 KALRAQISPHFIFNSLAAIASFVRTDPERARELLLEFADFTRYSFR-RHGEFTTLADELH 251 Query: 422 QIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQ---------- 470 I Y+A+ +ARFG +L+V + EV +P L +QPLVENA+ HG++ Sbjct: 252 SIDQYLALVRARFGARLSVTLQVAPEVLPVSLPFLCLQPLVENAVKHGLEGAVTLPRPHG 311 Query: 471 PCKGKGV---VTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNK-IGLLNVHHR 526 P + VTIS + G + + D G G+DP+ + R+ E + IGLLNV R Sbjct: 312 PVRAVDAPIRVTISALDAGAEAEVVIEDDGTGMDPERLRRILRGEGGASAGIGLLNVDER 371 Query: 527 VKLLYGE--GLHIRR-LEPGTEIAFYIPNQRTPV 557 ++ +YG+ GL I + G +I +P R V Sbjct: 372 LRQVYGDDYGLVIETGVGAGMKITLRLPKYRAGV 405 >UniRef50_A0JUQ0 Signal transduction histidine kinase, LytS n=8 Tax=Actinomycetales RepID=A0JUQ0_ARTS2 Length = 405 Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 105/343 (30%), Positives = 176/343 (51%), Gaps = 15/343 (4%) Query: 223 VNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQN----GDDFISPTTRQAM 278 +N K +R + DA+AIT+T VLA+ G E + + + Sbjct: 62 LNPAGAAKASRQLRTILGCDALAITDTSGVLAWDGAAEELKPSLMGLAAKVLDGGHTAVI 121 Query: 279 NYGKIIIKNNDEAHR--TPEIHSMLVI-PLWEKGVVTGTLKIYYCHAHQITSSLQEMAVG 335 G++ + D A T +I +VI P+ V G + + A + L Sbjct: 122 PAGEMQMLAGDAASGAITTDIERAVVIAPIKAGARVVGVIAAF---APSAGAGLVRATGE 178 Query: 336 LSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLI 395 ++ ++ Q+E++ + R + +AE+RAL+++I+PHF++N+LNAI+S I +P AR+L+ Sbjct: 179 VADWVAAQVELAELDASRTLLMEAEVRALRAQISPHFIYNSLNAIASFINTDPVRARELV 238 Query: 396 FNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPS 454 + + RY+ D + +EL I Y+ +E+ARFGD++ V I EV + IP Sbjct: 239 VEFADFTRYSFRRHGDFTT-LAEELRCIDRYLLLERARFGDRVQVSLRIAPEVLSTVIPF 297 Query: 455 LLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMP 514 L +QPLVENA+ HG++ +G G +TIS + G + + D G G+DP+ + + A Sbjct: 298 LSLQPLVENAVRHGLEAKEGPGHITISANDSGAFAEVTIEDDGVGMDPEQLRSMLAGHSD 357 Query: 515 GNKIGLLNVHHRVKLLYGE--GLHIRRLE-PGTEIAFYIPNQR 554 + +GL NV R++ +YGE GL I GT I +P + Sbjct: 358 SDHVGLRNVDARLRQVYGEDNGLVIETAPGEGTLITMRVPKSQ 400 >UniRef50_A9U7N0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U7N0_PHYPA Length = 374 Score = 144 bits (364), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 79/210 (37%), Positives = 127/210 (60%), Gaps = 8/210 (3%) Query: 332 MAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTA 391 MA GL ++ STQLE++ AE + AE++ALQ++++PHFLFNA+N IS+ R +PD A Sbjct: 1 MAEGLGRLFSTQLELAEAEMQSRLLKDAEVKALQAQVHPHFLFNAINTISALCRTDPDKA 60 Query: 392 RQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NC 450 R+L+ L + R N++ I + +EL ++ Y+ +E+ARF DK + +DI+ E+ + Sbjct: 61 RELLIQLGVFFRSNLQGARQILIPLSQELRHVEAYLTLEKARFPDKFEMTFDIEPELADL 120 Query: 451 CIPSLLIQPLVENAI---VHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIER 507 IP +QPLVENA+ HG+ P + KG V I+ ++ G+ V I D G GI +++E+ Sbjct: 121 EIPPFTLQPLVENAVRHAFHGLGP-QHKGSVCIAASQKGHEVMIVTADNGKGIPAELLEQ 179 Query: 508 V---EANEMPGNKIGLLNVHHRVKLLYGEG 534 + + G L N+ R+ +YG G Sbjct: 180 LGEQAVHSEDGTGTALHNIRKRIAEIYGRG 209 >UniRef50_B1HZJ7 Sensor protein n=3 Tax=Bacillaceae RepID=B1HZJ7_LYSSC Length = 1015 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 83/232 (35%), Positives = 137/232 (59%), Gaps = 7/232 (3%) Query: 333 AVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTAR 392 A+ L ++ ++V R+ Q R ++ E LQ++I PHFLFN LNAI + ++ + Sbjct: 788 ALELRSRVAALIKVKRSIQER---HRMEAAWLQAQIEPHFLFNTLNAILTLSEMDSERTS 844 Query: 393 QLIFNLSRYLRYNIELKDDEQ-IDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCC 451 +L+ LS +LR + ++ E + ++ EL I+ Y+ I+Q RFGD++ V +D++ + Sbjct: 845 RLVEALSDFLRESYNFQNVEALVPLENELTLIQAYLYIQQERFGDRIQVKWDLEASTDVL 904 Query: 452 IPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIER-VEA 510 IPSL IQPLVENA+ HGI G + I + E +++ I V D G GID + + + ++ Sbjct: 905 IPSLTIQPLVENALQHGILKRTEGGTIHIRIYESESQLEITVSDNGVGIDEQRLSQLLQT 964 Query: 511 NEMPGNKIGLLNVHHRVKLLYGEGLHI-RRLEPGTEIAFYIPNQRTPVASQA 561 + P IGL+N H R++ YG+GLHI +L GT ++F + ++ PV A Sbjct: 965 KQQPSGSIGLMNTHLRLQQHYGQGLHITSKLHEGTAVSFVVLVKK-PVKQNA 1015 >UniRef50_C4FAQ4 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAQ4_9ACTN Length = 495 Score = 141 bits (355), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 89/304 (29%), Positives = 154/304 (50%), Gaps = 10/304 (3%) Query: 210 LDIANKTLPLFRH-VNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDD 268 L IA+K RH + E+ C++I + A A+ IT+ V+A G G Sbjct: 91 LGIASKIFAYTRHGLAPEATLGACKLILPETLASAICITDGTAVVASWGEDSDRCPTGTP 150 Query: 269 FISPTTRQAMNYGKIII-----KNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAH 323 + +T + + ++ + DE + P + + + PL + GT ++YY Sbjct: 151 VVLESTLRVIENERMEVFARETTGPDEPYFFPRLQAGITAPLIVRDRCMGTFELYYPRYS 210 Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSS 383 I + +A G +++ISTQL E+ +++ + ELRALQS+++PHFLFN + I S Sbjct: 211 DIDARQTALATGFAELISTQLASFELERQEDLSARMELRALQSQVDPHFLFNTIGTIVSL 270 Query: 384 IRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGD-KLTVIY 442 +R P+ AR L+ + S Y R + D ++ EL Q YI + QAR+GD +L + Sbjct: 271 VRTEPEKARSLLIDFSNYYRQTLS-NSDALTSLENELDQGMRYINLMQARYGDGRLKLSV 329 Query: 443 DIDE-EVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGID 501 D D ++C +P ++QPL+EN I H ++ + + +S E + ++I V D G G+ Sbjct: 330 DFDPFTLDCRVPPFILQPLLENCIKHAMREVEPLS-IKLSSLETDDGIQIVVEDDGIGMS 388 Query: 502 PKVI 505 + + Sbjct: 389 EETL 392 >UniRef50_A9U6T1 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U6T1_PHYPA Length = 717 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 76/199 (38%), Positives = 122/199 (61%), Gaps = 5/199 (2%) Query: 340 ISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLS 399 + T LE+ R+ + A AE+ LQ++I PHFL+NALN + + + ++P+ +L+ LS Sbjct: 514 VRTLLELRRSVR---NAISAEMAFLQAQIKPHFLYNALNTMIALLPIDPEKTAELLHELS 570 Query: 400 RYLRYNIELKDDEQIDI-KKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQ 458 RYLR + + ++ +Q+ + ++E+ + Y+ +E+ARF D+L V YDI ++N +P L IQ Sbjct: 571 RYLRGSFDFRNRDQLTVLRQEMALVTSYLNLEKARFEDRLQVDYDIQADMNRLVPPLTIQ 630 Query: 459 PLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKI 518 P+VENA+ HGI + G V I V E R+ I V D G G+ P+ +E V GN + Sbjct: 631 PIVENAVRHGIMRKEEGGRVRILVQELEERLEITVEDNGTGMTPERMEAVREGR-AGNGV 689 Query: 519 GLLNVHHRVKLLYGEGLHI 537 GL N++ R+ L+G L I Sbjct: 690 GLKNINARLLTLFGTELMI 708 >UniRef50_UPI00016C0712 two-component sensor histidine kinase n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0712 Length = 562 Score = 138 bits (348), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 80/236 (33%), Positives = 141/236 (59%), Gaps = 17/236 (7%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 + + +M + Q+I ++ +Q AE+R+LQ +INPHFL+N L I+ Sbjct: 327 LNHTFNQMVWDMKQLIESEYXQKVLKQ------NAEIRSLQMQINPHFLYNTLETINWLS 380 Query: 385 RLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 R+ D + +L R +RY++ K + + IK+E+ + DY+ I++ R+GDK++VI++ Sbjct: 381 RMRGMDDVGDITASLGRLMRYSLSKK--KYVQIKEEIQNLIDYVEIQEVRYGDKVSVIFE 438 Query: 444 IDEEVNC-CIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 +DEE++ IP LLIQP+VENAIVHGI+ ++ + V + G + I + D G GI Sbjct: 439 VDEELDFFYIPKLLIQPMVENAIVHGIEGKVEPSMIWVRVKKVGQXIDIEIEDDGVGIKS 498 Query: 503 KVIERVEANEMPG----NKIGLLNVHHRVKLLYGE--GLHIRRLE-PGTEIAFYIP 551 ++++++ AN+ + IG++NV+ R+++LYG+ G+ I E GT+I +I Sbjct: 499 EILDKILANKDTKTAGHSSIGMMNVNRRIQMLYGKXYGMQIESTEGKGTKIILHIK 554 >UniRef50_Q2S4J4 Histidine kinase family n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S4J4_SALRD Length = 379 Score = 137 bits (346), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 75/216 (34%), Positives = 125/216 (57%), Gaps = 15/216 (6%) Query: 348 RAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIE 407 +A + MA + +L AL++++NPHFLFN LN+IS+++R +P+ AR++I LS +RY +E Sbjct: 168 QATEFLAMAREQQLAALKAQVNPHFLFNTLNSISATLRQDPERAREMIAKLSDMMRYALE 227 Query: 408 LKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCC---IPSLLIQPLVENA 464 D E + +++E+ + Y+ +E+ RF D+L D+D + + +P +++QPLVENA Sbjct: 228 GPDREFVPLREEIAFTRRYLDLERHRFSDRLRARMDVDADTDALDTPVPPMVLQPLVENA 287 Query: 465 IVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPG--NKIGLLN 522 + HGI P + G VT++V + + + V DTG G D + + G + GL Sbjct: 288 LRHGIAPSEDGGSVTVAVTAEHDTLDVHVEDTGVGPDAD-------DPLSGSTDGTGLAT 340 Query: 523 VHHRVKLLYGE--GLHIRRLEP-GTEIAFYIPNQRT 555 R++ YG LH R +P G ++ F IP T Sbjct: 341 TSTRLERTYGPDAALHTARNDPTGFKVWFSIPRNGT 376 >UniRef50_C0Z9X4 Sensor protein n=2 Tax=Bacillales RepID=C0Z9X4_BREBN Length = 1050 Score = 137 bits (346), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 81/215 (37%), Positives = 126/215 (58%), Gaps = 8/215 (3%) Query: 342 TQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRY 401 T ++ S EQLR E LQ++I PHFLFNAL+A+++ +N D R L++ S + Sbjct: 826 TTIKQSVREQLR-----LEAAWLQAQIQPHFLFNALSAVTALSDINLDKMRDLLYEFSNF 880 Query: 402 LRYNIELKD-DEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPL 460 LR + +D D + I+ EL ++ Y+ IE+ RF ++L V+++ID+ + IP L IQPL Sbjct: 881 LRNKFKFEDMDGLVPIETELSLVRSYLYIEKVRFEERLQVVWEIDDCEDVKIPFLTIQPL 940 Query: 461 VENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIER-VEANEMPGNKIG 519 VENAI HG+ G +TI ++ V I V D G G+D I+R +E + +G Sbjct: 941 VENAIKHGVMNRIRGGEITIRISVQETHVEITVEDDGIGMDEDQIQRLLERKADSRSGVG 1000 Query: 520 LLNVHHRVKLLYGEGLHIRRLE-PGTEIAFYIPNQ 553 L+N R+K +G GLHI + GT++ F++ N+ Sbjct: 1001 LINTDQRLKRHFGTGLHIESTQGTGTKVTFHVRNK 1035 >UniRef50_C1F299 Regulator of cell autolysis n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F299_ACIC5 Length = 432 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 91/233 (39%), Positives = 132/233 (56%), Gaps = 13/233 (5%) Query: 332 MAVGLSQII--STQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPD 389 M VG+ I + ++E S EQ R + +A L ALQ +INPHFLFN LN+I S +R +PD Sbjct: 185 MVVGIPLKIWNAVRIEQSLKEQKRLLL-EARLDALQRQINPHFLFNTLNSIGSLVRRDPD 243 Query: 390 TARQLIFNLSRYLRYNIELKD-DEQIDIKKELYQIKDYIAIEQARFG-DKLTVIYDID-E 446 AR++I L+ LR LKD D + ++EL +DY+ IE RFG DKL V+ +ID Sbjct: 244 QAREMIVKLANILR--ALLKDHDSFVAFREELRFTEDYLGIEVVRFGTDKLRVVKEIDAR 301 Query: 447 EVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIE 506 + +PS+L+QPLVEN+I HG++P G VT+ G+R + V D G G+ Sbjct: 302 TLELPVPSMLLQPLVENSIKHGLEPRIHGGTVTLRSRLEGDRFILEVEDDGVGVAAS--S 359 Query: 507 RVEANEMPGNKIGLLNVHHRVKLLYGEGLH---IRRLEPGTEIAFYIPNQRTP 556 + A GN +G+ NV R+++L+G H + R GT + +P P Sbjct: 360 QRPAGMRTGNGVGMRNVRERLEVLFGGAAHFNVVSRPGRGTRVIMEMPVDSEP 412 >UniRef50_B3E2Y4 Signal transduction histidine kinase, LytS n=1 Tax=Geobacter lovleyi SZ RepID=B3E2Y4_GEOLS Length = 403 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 89/223 (39%), Positives = 127/223 (56%), Gaps = 17/223 (7%) Query: 338 QIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFN 397 Q+IST V R +QL KAE+RALQ++INPHFLFNA++ I S R +P A L+ Sbjct: 186 QLIST---VFREQQL----AKAEIRALQAQINPHFLFNAISTIISYTRTDPAIATNLLVK 238 Query: 398 LSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLL 456 L+ + R N + ++ + EL + Y+AIEQARF +++ + Y IDE+ ++C +P L+ Sbjct: 239 LAEFFR-NSTATTEREVPLSVELQHCEAYLAIEQARFEERVRIHYQIDEDALDCPVPPLI 297 Query: 457 IQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGID-PKVIERVEANEMPG 515 +QPLVEN I HGI P G +TI + + I V D G G+D K+ + + P Sbjct: 298 LQPLVENGIRHGILPRDAGGDITIQARKEQQNLHIRVADNGVGMDQAKLSGLLTTRQHPT 357 Query: 516 NK----IGLLNVHHRVKLLYGEGLHIR-RLEP--GTEIAFYIP 551 K I L NV+ R+ LYG +R P GT I+F IP Sbjct: 358 GKEGLGIALKNVNARLVALYGRKRALRIESSPGAGTTISFSIP 400 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 60/178 (33%), Positives = 98/178 (55%), Gaps = 8/178 (4%) Query: 6 NMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVP 65 + L +F+R L I FLIR + F+ LL A S ++ L + +F + +T+SG Sbjct: 2 GLFLDLFERLGLFAILFIFLIRFKAFKRLLTGIA-SRRDKLVLAFMFGGAGIMATYSGFA 60 Query: 66 VEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCIS 125 G++ N+R +AV GIL GP VG+ G++AGIHRY ID G+T++ C I ++L G ++ Sbjct: 61 FHGAIANLRGVAVALAGILGGPLVGLAAGLVAGIHRYAIDPAGLTSLSCGIATVLQGVVA 120 Query: 126 GWINLKIPKAQRWRVGILG----GMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL 179 W+ P+ +R I G + E L M L+++ A + + +V+ + P IL Sbjct: 121 AWL---YPRLRRVEYDIFAAFAVGAVNEILKMTLILLLAKPFSSALHLVTVLAFPSIL 175 >UniRef50_C0D485 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D485_9CLOT Length = 497 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 76/204 (37%), Positives = 120/204 (58%), Gaps = 9/204 (4%) Query: 358 KAELRALQSKINPHFLFNALNAISSSIRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDI 416 K+ L LQ++INPHFLFN LN ISS R+ N D +L+ + +LRYN++ + + + Sbjct: 294 KSHLNFLQARINPHFLFNTLNMISSLARIENADQCAELMEITATFLRYNLD-NISKTVTL 352 Query: 417 KKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGK 475 +KE+ +KDY+AI++ R+G + + +D+DE + +P +++QPLVENAI HGI Sbjct: 353 QKEMENLKDYVAIQEYRYGGRYSYFFDVDESCFDFKMPCMILQPLVENAIQHGIAMKMSG 412 Query: 476 GVVTISVAECGNRVRIAVRDTGHGIDPKVIERV----EANEMPGNKIGLLNVHHRVKLLY 531 G V I V + + + VRD G G+ P+ I R+ E N G IGL N++HR++L Y Sbjct: 413 GCVWIKVFRTEHHICMEVRDNGVGMTPQQIRRIYEEFENNGSSGMHIGLRNIYHRIQLFY 472 Query: 532 G--EGLHIRRLEPGTEIAFYIPNQ 553 I + PG +I ++ + Sbjct: 473 NGHAKFEIEAMNPGLKIRIWLQRE 496 >UniRef50_A1TDT4 Signal transduction histidine kinase, LytS n=9 Tax=Actinomycetales RepID=A1TDT4_MYCVP Length = 409 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 81/239 (33%), Positives = 135/239 (56%), Gaps = 16/239 (6%) Query: 333 AVG-LSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTA 391 AVG +++ ++Q+E++ + R ++AE+ AL+++I+PHF++NALN I+S +R +PD A Sbjct: 160 AVGEVARYAASQIELAELDASRARLDRAEVLALRAQISPHFIYNALNTIASFVRTDPDRA 219 Query: 392 RQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NC 450 R+LI + + RY+ + + +EL I Y+ +E+ARFG L V + EV N Sbjct: 220 RELILEFADFTRYSFRAA-GQFTTLAEELRNIDRYLTLERARFGTALKVTLQVAPEVLNV 278 Query: 451 CIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVI----- 505 +P L +QPLVENA+ HG +G G + + + G+ I V D G G+DP + Sbjct: 279 VVPFLALQPLVENAVRHGFA-GRGSGSIELVARDEGSDCVITVEDDGVGMDPDALRSGPG 337 Query: 506 ----ERVEANEMPGNKIGLLNVHHRVKLLYGE--GLHIRR-LEPGTEIAFYIPNQRTPV 557 + A+E G +GL NV HR++ +G GL + + GT++ +P R+ V Sbjct: 338 DALSDGAPASEGAGAHVGLTNVDHRLRAAFGNDYGLVVETAIGAGTKVIMRVPKFRSGV 396 >UniRef50_Q1ILF7 Periplasmic sensor signal transduction histidine kinase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1ILF7_ACIBL Length = 388 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 77/210 (36%), Positives = 120/210 (57%), Gaps = 14/210 (6%) Query: 348 RAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIE 407 RA QL +AEL AL+++++PHFLFN LN+I+S + + A +I +LS LR + Sbjct: 155 RAAQLEAQLTRAELEALRNQLHPHFLFNTLNSIASLMHEDVQGADDMIADLSYMLRAYLR 214 Query: 408 LKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIV 466 ++++I +++EL ++ Y+ I++ RF D+L+ D+ E + N +P+LL+QP VENAI+ Sbjct: 215 DTNEQEISLRQELDLLETYLRIQKRRFEDQLSYTIDVAETLYNAAVPTLLLQPFVENAIL 274 Query: 467 HGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHR 526 HGI P G VT+S + G + + V D G G P EM G IG+ N R Sbjct: 275 HGIAPSCSPGHVTVSARQLGGHLMLTVFDDGVGFTP--------GEMEG--IGVSNSRSR 324 Query: 527 VKLLYGEGLHIRRLEP---GTEIAFYIPNQ 553 +K LYGE + + GT + +P Q Sbjct: 325 LKQLYGEDQKVELVSAPGQGTTVTVRLPFQ 354 >UniRef50_C6CV50 Sensor protein n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CV50_PAESJ Length = 1112 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 75/200 (37%), Positives = 117/200 (58%), Gaps = 2/200 (1%) Query: 354 EMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDE- 412 E A + E LQS+I PHF++NAL+ I S + A +L+ S YLR + +L Sbjct: 897 EQAIRMETLFLQSQIKPHFVYNALSGIISLCYSDGARAGKLLGEFSNYLRLSFDLDPRHA 956 Query: 413 QIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPC 472 ++ + +EL K Y+ +EQARFG++L V +++ +P+L++QPLVENAI HG+ Sbjct: 957 KVSLNRELSLTKSYVELEQARFGERLHVEWEVGAPTETLVPALILQPLVENAIRHGVMKR 1016 Query: 473 KGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYG 532 G V I ++I+V+D G G++P ++R+ E G IGL+NVH R+ +G Sbjct: 1017 LSGGNVVIRAKLVQYGLQISVQDDGVGMNPDQLDRMFKTERMGGSIGLINVHKRLINEFG 1076 Query: 533 EGLHIRRLE-PGTEIAFYIP 551 +GL I ++ GT +AF IP Sbjct: 1077 QGLRIESVQGKGTTVAFRIP 1096 >UniRef50_C0Z9Z8 Sensor protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z9Z8_BREBN Length = 1024 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 79/216 (36%), Positives = 122/216 (56%), Gaps = 10/216 (4%) Query: 342 TQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRY 401 T+ ++S E+LR E LQS+I PHFLFNALN+I++ + + L+ S Y Sbjct: 814 TEFKISFDERLR-----MEGAWLQSQIEPHFLFNALNSIAALGLQDFTKMQTLLEEFSNY 868 Query: 402 LRYNIELKDDEQ-IDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPL 460 LR + + + E I + EL ++ Y+ IE+ RFGD+L V +D+D +++ C+P L IQPL Sbjct: 869 LRLSFDFHNSEPVISLHDELDLVRSYLYIEKQRFGDRLQVEWDLDPDLDFCLPPLSIQPL 928 Query: 461 VENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNK--- 517 VENAI HG+ G V I + + I+++D G GI + + ++ + G K Sbjct: 929 VENAIKHGLMQRTSGGTVWIHIKDNEEYFEISIQDDGEGIAEEDLNQLFSQTRHGKKRAS 988 Query: 518 IGLLNVHHRVKLLYGEGLHIRRL-EPGTEIAFYIPN 552 +GL N+ R++ LY +GL I E GT + F IP Sbjct: 989 VGLRNIERRLRQLYNQGLTINSSPEQGTIVTFGIPK 1024 >UniRef50_C1ABX0 Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1ABX0_GEMAT Length = 360 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 73/210 (34%), Positives = 118/210 (56%), Gaps = 12/210 (5%) Query: 348 RAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIE 407 +A QL A L+ALQ+++ PHFLFN L AI+ + ++ A ++ LS LR ++ Sbjct: 151 QALQLEASLTSARLQALQAQLQPHFLFNTLAAIAELVHVDSQAAGTMLTRLSGLLRASLR 210 Query: 408 LKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIV 466 + QI +++E+ +++Y+ I + R G +L V D+ + + + +P++L+QPLVENA+ Sbjct: 211 AEASNQIPLREEMALLEEYLGIMRVRHGPRLEVTADVADGLGDVLVPAMLLQPLVENALE 270 Query: 467 HGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHR 526 HG+ G+G V ISV G +V + VRD G G + +E + + G+ +GL N R Sbjct: 271 HGVSRRAGRGWVRISVQSVGAQVELLVRDDGPG------DAIEGDAVEGDGVGLTNTRRR 324 Query: 527 VKLLYGEGLHIRRLEP----GTEIAFYIPN 552 + LYGE H R E GT + IP Sbjct: 325 LDALYGEA-HTLRFESLPGEGTTVRITIPR 353 >UniRef50_C5RJF6 Histidine kinase n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJF6_CLOCL Length = 585 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 83/227 (36%), Positives = 132/227 (58%), Gaps = 16/227 (7%) Query: 338 QIISTQLEVSR--AEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTA-RQL 394 Q++ Q+ V + EQL E + L S+INPHFL+N L I N ++ Sbjct: 360 QLLINQVYVEKIQKEQLASKQKDVEFKMLASQINPHFLYNTLETIRMKAYCNEQYEIAEI 419 Query: 395 IFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNC---C 451 + L++ +R N+E+ D+ + ++ E+ IK+Y+ I++ RFGD++T YDI+ E N Sbjct: 420 VKILAKIMRRNLEINDN-LVSLESEITMIKNYLKIQKFRFGDRIT--YDINIECNIDDYY 476 Query: 452 IPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN 511 + LL QP+VENA VHG + +G G + I +++ NR+ ++RD G GI P+ +E + A+ Sbjct: 477 VLPLLFQPVVENAFVHGFEHKQGIGEIKIIISKDENRLIFSIRDNGVGISPETLENLRAS 536 Query: 512 ----EMPGNKIGLLNVHHRVKLLYGE--GLHIRR-LEPGTEIAFYIP 551 G IGL NV+HR+K+ YG+ G+ I LE GTE+ Y+P Sbjct: 537 ISNINYKGKSIGLNNVNHRIKIYYGDEYGVEIFSGLEVGTEVKIYLP 583 >UniRef50_C1AA09 Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AA09_GEMAT Length = 377 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 77/214 (35%), Positives = 115/214 (53%), Gaps = 10/214 (4%) Query: 349 AEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIEL 408 A ++ E +A+LRALQ+++NPHFLFNALN+I + I +P A+QL+ L+ LR + Sbjct: 155 AARMSEDLAQAQLRALQAQLNPHFLFNALNSIVTLIGRDPALAQQLVVRLADLLRATLRA 214 Query: 409 KDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHG 468 D + I + +EL + Y+ IE RF D+L V + + +P+ +QPLVENA++HG Sbjct: 215 GDGQVIALTQELEFTRRYLDIELVRFADRLRVEWPEGPTPDAMVPAFALQPLVENALLHG 274 Query: 469 IQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVK 528 I G GVV+IS + + VRDTG G+ G GL+N+ R++ Sbjct: 275 IARQTGAGVVSISATREQQELVLRVRDTGPGLSAD-------TSSTGAGTGLVNLRTRLE 327 Query: 529 LLYGEGLHIR---RLEPGTEIAFYIPNQRTPVAS 559 LYG+ +R L G E +P P S Sbjct: 328 RLYGDRATLRVQDALTGGVEAELRVPFVAAPDGS 361 >UniRef50_C7H4I2 Periplasmic sensor signal transduction histidine kinase n=2 Tax=Faecalibacterium prausnitzii RepID=C7H4I2_9FIRM Length = 495 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 83/253 (32%), Positives = 140/253 (55%), Gaps = 15/253 (5%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQLREMA-----NKAELRALQSKINPHFLFNALN 378 ++T + +M ++Q ++TQ + R E++R +A L L+S++NPHFLFN LN Sbjct: 244 RLTGTFNQMKHAMAQQLTTQQALHR-EEVRNLALEKDLEHTRLEVLKSQVNPHFLFNTLN 302 Query: 379 AISSSIRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDK 437 IS RL + T Q+I +L R+N+ K +QI +++EL ++DYI ++Q RF + Sbjct: 303 MISCMARLEDAATTDQMIVHLGSLFRHNLRTKR-QQITLEEELDGLEDYIYLQQMRFDGR 361 Query: 438 LTVIYDID-EEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 +TV I + +PS ++QP+VENA HG++ C+ G + + G + + V D Sbjct: 362 ITVEKSIRVQPAAVLVPSFMLQPVVENAYSHGLKSCEEGGRILLRAWMQGKVLVLTVADN 421 Query: 497 GHGIDPKVIERVEA----NEMPGNKIGLLNVHHRVKLLY-GEGLHI-RRLEPGTEIAFYI 550 G G+ P+ ++ V+ +E G IGL N+ R+ +LY G + I R + GT + F + Sbjct: 422 GKGMTPEELDAVQTKIAQSEQTGRSIGLGNISRRIGMLYPGGKMQIYSRADCGTVVRFEL 481 Query: 551 PNQRTPVASQATL 563 P + P + TL Sbjct: 482 PQTQQPEEKEETL 494 >UniRef50_A6G9H0 Histidine kinase internal region n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G9H0_9DELT Length = 382 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 72/198 (36%), Positives = 108/198 (54%), Gaps = 11/198 (5%) Query: 348 RAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIE 407 R EQ R A +AEL AL S++NPHFLFN+LN +++ I + + A + LS LRY +E Sbjct: 166 REEQARREALQAELDALHSRMNPHFLFNSLNTVAALIEEDAEAAVDAVERLSDLLRYTLE 225 Query: 408 LKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDE--EVNCCIPSLLIQPLVENAI 465 + + EL +++Y+AIE RFG++L V + +DE E +P L +QPLVENA+ Sbjct: 226 RDAASTVPLADELQCVREYLAIEGLRFGERLRVEWALDEGVEAGAWVPPLSLQPLVENAV 285 Query: 466 VHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHH 525 HG+ + V + G+++ + VRD G G P+ + G L + Sbjct: 286 KHGVSRSRTPVTVRLQARRVGDQIALEVRDDGPGSTPR------STGSEGTGTALRTLSE 339 Query: 526 RVKLLYGEGLHIRRLEPG 543 R++LLYGE R E G Sbjct: 340 RLRLLYGEAA---RFEAG 354 >UniRef50_Q02A00 Signal transduction histidine kinase, LytS n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02A00_SOLUE Length = 606 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 71/200 (35%), Positives = 118/200 (59%), Gaps = 11/200 (5%) Query: 340 ISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLS 399 I+ +L+ R E++ + ++AELRALQS+INPHFLFNALN + +I AR+++ NL+ Sbjct: 398 IAERLDTLRREEMNRLVSQAELRALQSQINPHFLFNALNTLYGTIPREAAGARRMVINLA 457 Query: 400 RYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDE-EVNCCIPSLLIQ 458 RY ++ D + + +E+ ++ Y+ +EQ R G++L V +++D+ + +P L IQ Sbjct: 458 EIFRYFLQ-SDRTFVPLAQEMQIVRAYLEVEQLRLGERLRVEFEVDDAALEVPVPVLSIQ 516 Query: 459 PLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKI 518 PLVENAI HG+ G V + + G ++ I V ++ ER A+ + G + Sbjct: 517 PLVENAIKHGVAQSSEPGYVRVRIERRGEQLNIVVENSN--------ERPYAS-VTGTGV 567 Query: 519 GLLNVHHRVKLLYGEGLHIR 538 GL NV R+++ YG G +R Sbjct: 568 GLQNVRRRLEICYGPGATLR 587 >UniRef50_A4FIX1 ATP-binding region, ATPase-like n=4 Tax=Actinomycetales RepID=A4FIX1_SACEN Length = 363 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 73/218 (33%), Positives = 127/218 (58%), Gaps = 10/218 (4%) Query: 344 LEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLR 403 LE +R E ++A +AELRAL+++I+PHF++NA+ I+S +R +PD + +L+ + + ++R Sbjct: 140 LERARLENSADLAAQAELRALRAEISPHFMYNAMTVIASLVRSDPDRSHELMLDFADFIR 199 Query: 404 YNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVE 462 Y + + E + E + I+ Y+ +++A GD+L V + EV IP L+++PLVE Sbjct: 200 YGLA-RHREYTTVSDEFHAIETYLGLQRAVLGDRLKVQIRVAPEVLAVAIPYLVLEPLVE 258 Query: 463 NAIVHGIQP-----CKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNK 517 NA+ HGI+P +G G+V + G + I+V D G G+DP + + A + Sbjct: 259 NAVRHGIEPRLTPDGQGTGLVQVQGEAEGTDLVISVEDDGVGMDPARAQALLAGQDSAES 318 Query: 518 IGLLNVHHRVKLLYGE--GLHIRRLE-PGTEIAFYIPN 552 +GL +V R++ +YG GL + E GT + +P Sbjct: 319 MGLASVDRRLRTVYGAWYGLVVETAEGAGTRVVVRVPR 356 >UniRef50_A4F5Z4 Sensor kinase, two-component system n=24 Tax=Actinomycetales RepID=A4F5Z4_SACEN Length = 422 Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 90/286 (31%), Positives = 153/286 (53%), Gaps = 24/286 (8%) Query: 259 GEHNYQNG------DDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSMLVIPLWEKGVVT 312 GE N+ G + + R+ +++G++ + R + +V+PL +G Sbjct: 101 GEANHHYGGLRTRIEQVLRTGKREYVDHGEVACE-----QRPCVMRHAVVVPLEVEGENR 155 Query: 313 GTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHF 372 G L I + L A ++ +STQLE++ ++ +E +AE+RAL+++I+PHF Sbjct: 156 GALVIISAGDRR---RLLRAAGEVANHVSTQLELAELQESKERLARAEVRALRAQISPHF 212 Query: 373 LFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQA 432 ++NALN ISS IR +P+ AR L+ + + RY+ + E+ I Y+ +E+A Sbjct: 213 IYNALNTISSQIRNDPEQARDLLQEFADFTRYSFR-TSGLYTTLADEIRNIDRYLTLERA 271 Query: 433 RFG-DKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVR 490 RFG D+L V I EV +P L +QPLVENA+ HG+ G G V++ + G Sbjct: 272 RFGPDRLKVQLKIAPEVLPVVVPFLALQPLVENAVRHGLANKPGGGTVSVIAEDNGVEAL 331 Query: 491 IAVRDTGHGIDPKVIERVEAN----EMPGNKIGLLNVHHRVKLLYG 532 I+V D G G++P ER++A + G +GL N+++R++ +G Sbjct: 332 ISVDDDGIGMNP---ERLDAELADAHLTGAHVGLGNINNRMRATFG 374 >UniRef50_A8R813 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R813_9FIRM Length = 471 Score = 131 bits (329), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 84/232 (36%), Positives = 136/232 (58%), Gaps = 12/232 (5%) Query: 328 SLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISS-SIRL 386 +L+EMA +S + TQ E +AE + +A ++EL+ LQ++INPHFLFN LN I + + Sbjct: 241 ALEEMAGKISHNMETQKE--KAELEKRLA-QSELKMLQNQINPHFLFNTLNMIYCMAEKE 297 Query: 387 NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDI-D 445 A ++ S LRY +E+++ D K+EL+ ++ YI I++ RFGDKL + D+ D Sbjct: 298 GAKEASSMLLKTSHLLRYGLEMQN-RLSDFKRELHALQYYIDIQKLRFGDKLAIQVDVQD 356 Query: 446 EEV--NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPK 503 E N IP ++ QPL+ENA+ HG++ C G++ I + + + I V D G G+ Sbjct: 357 MEAIGNVAIPGMIFQPLIENAMKHGLKDCVKDGLIGIEICKTAGNINIKVFDNGQGMAKP 416 Query: 504 VIERVEANEM--PGN-KIGLLNVHHRVKLLYGEGLHIR-RLEPGTEIAFYIP 551 +++++ N+ PG+ +GL NV HR+K Y E + I + + G A YI Sbjct: 417 MLKQLIENDYHAPGSTSLGLYNVVHRLKAYYAERVSIDIQSDIGCGFAIYIS 468 >UniRef50_C4KYR3 Signal transduction histidine kinase, LytS n=1 Tax=Exiguobacterium sp. AT1b RepID=C4KYR3_EXISA Length = 593 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 75/209 (35%), Positives = 120/209 (57%), Gaps = 10/209 (4%) Query: 348 RAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIE 407 + +Q+ +A++ E+ ++I PHFL+N + + +P A +L+ +LS Y+RY E Sbjct: 380 KKQQVEALASQHEMSFFNAQIKPHFLYNTFGNVIALCYTSPPEAARLLSHLSTYVRYIFE 439 Query: 408 L-KDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAI 465 + + +I I++E+ I Y+AIEQ RF D V +I+E + +C IP LLIQPLVENA+ Sbjct: 440 NGRAENEISIRQEVDMIDSYLAIEQTRFRDSFYVKKEINESLLDCSIPPLLIQPLVENAV 499 Query: 466 VHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHH 525 HG+ G+ +T+S+ E + I V+DTG G DP V +N+ G IG+ N+ Sbjct: 500 RHGLYRHPGQKRLTLSIQERNGMIEIFVQDTGSGFDPNV-----SNKTSG--IGICNIKS 552 Query: 526 RVKLLYGEGLHI-RRLEPGTEIAFYIPNQ 553 R++ L G + L+ GT I +P Q Sbjct: 553 RIEHLPGATFDLASTLKKGTTIHLRLPKQ 581 >UniRef50_D0XXI3 Signal transduction histidine kinase, LytS n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XXI3_9CAUL Length = 352 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 78/190 (41%), Positives = 109/190 (57%), Gaps = 13/190 (6%) Query: 345 EVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRY 404 EV+ A +A +AE AL++++ PHFLFN LNAIS+ + P AR+LI L LR Sbjct: 153 EVAGARMEARLA-EAESAALRAQLQPHFLFNTLNAISALVEDEPRRARRLIAKLGDLLRL 211 Query: 405 NIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDID-EEVNCCIPSLLIQPLVEN 463 +IE Q EL + Y+AIEQAR G +L V+ D++ + + C +P+LL+QPLVEN Sbjct: 212 SIEDHRAPQSAFGDELDFTEAYLAIEQARLGPRLRVVRDVEPDALTCLVPTLLLQPLVEN 271 Query: 464 AIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNV 523 AI HGI P G VTI+ G ++ + V D G G ++ERV GL N Sbjct: 272 AIRHGIAPLVEGGTVTIAAKVAGGQLHVTVVDDGKG-AADIVERV----------GLGNA 320 Query: 524 HHRVKLLYGE 533 R++ LYG+ Sbjct: 321 RRRLRQLYGD 330 >UniRef50_C6JC63 Two-component sensor kinase yesM n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC63_9FIRM Length = 599 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 80/213 (37%), Positives = 132/213 (61%), Gaps = 12/213 (5%) Query: 354 EMANK-AELRALQSKINPHFLFNALNAISSSIRLNPDTA-RQLIFNLSRYLRYNIELKDD 411 E+AN+ AE+ L+ +INPHFL+N L+ IS N ++ L L ++LR +I K + Sbjct: 381 EIANREAEIEFLKMQINPHFLYNCLDTISWLGFSNGNSEITDLAVALGKFLRASI--KRE 438 Query: 412 EQIDIKKELYQIKDYIAIEQARFGDKLTVIYDI-DEEVNCCIPSLLIQPLVENAIVHGIQ 470 + +K+E+ + +Y+ I++ RFGDK+ + ++I DE +N IPS +IQP++EN+IVHG++ Sbjct: 439 DYYTVKQEMEVVDNYLFIQKYRFGDKIEIRHNIPDEVLNFYIPSFIIQPVIENSIVHGLE 498 Query: 471 PCKGKGVVTISVAECGNR-VRIAVRDTGHGIDPKVIERVEANEMPGNK---IGLLNVHHR 526 KG++ I++ C N+ ++ + D G G+D + +++V N NK IGL NV+ R Sbjct: 499 EQIEKGILWINIQLCNNKYLQFNLTDNGKGMDEEQLKQVIQNYSDKNKKSSIGLSNVYRR 558 Query: 527 VKLLYGEG--LHIRRLE-PGTEIAFYIPNQRTP 556 + LLYGE H+ + GTE+ F IP + P Sbjct: 559 LNLLYGEACEFHVTSVAGEGTEVTFRIPVMQVP 591 >UniRef50_Q1YRG0 Sensor histidine kinase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRG0_9GAMM Length = 386 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 90/271 (33%), Positives = 144/271 (53%), Gaps = 22/271 (8%) Query: 309 GVVTGTLKIYYCHA--------HQITSSLQEMAVGLS-QIISTQLEVSRAEQLREMANKA 359 G + G++ I+ C A +Q+ S E + + + QL+ SRAE A +A Sbjct: 122 GWLFGSIMIFLCWAAFYHGIKYYQLLQSEHEALLHFAAENKEEQLKRSRAETF---AQEA 178 Query: 360 ELRALQSKINPHFLFNALNAISS-SIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKK 418 +L+ L+ ++NPHFLFN LNAIS+ + + A +I LS +LRY++E +++ +++ Sbjct: 179 QLKMLRYQLNPHFLFNTLNAISALVVSRSSANANTMIMQLSNFLRYSLENDPIKRVTLEE 238 Query: 419 ELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGV 477 E+ ++ Y+ IE+ RF D+L + +D+D + IPSLL+QPLVENAI + I P + G Sbjct: 239 EVRALRLYLDIEKTRFADRLELEFDVDPAAHEIKIPSLLLQPLVENAIKYAIAPAEKGGK 298 Query: 478 VTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI 537 +++ G + I V+DTG GI+ V PG IGL N R+ YG+ Sbjct: 299 ISVFSKLDGEHLVIEVKDTGAGIEGDHHSMVSG---PG--IGLKNTVDRLSAFYGDNYVF 353 Query: 538 RRLEP---GTEIAFYIPNQRTPVASQATLLL 565 P G I +P ++ S A L+L Sbjct: 354 ELRGPNASGMTIYIRLPLEKQTAESNAELVL 384 >UniRef50_A8RP74 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RP74_9CLOT Length = 607 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 78/220 (35%), Positives = 124/220 (56%), Gaps = 15/220 (6%) Query: 346 VSRAEQLREMANKAELRALQSKINPHFLFNALNAISS-SIRLNPDTARQLIFNLSRYLRY 404 +SR + +++ KAEL AL ++ PHFL+N L+AI ++ P + I L + R Sbjct: 376 LSRLVEEQKIKEKAELHALFEQVKPHFLYNTLDAIGYMALTEEPSQTYEAIETLGSFYRQ 435 Query: 405 NIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVEN 463 ++ + D+ I ++KE + DY+ + + R+GD V Y +DE + +P L++QPLVEN Sbjct: 436 SLS-QGDQMITVEKETAIVNDYVKLLRLRYGDLFDVEYQVDESCLRVLVPHLILQPLVEN 494 Query: 464 AIVHGIQPCKGKGVVTISVA-ECGNRVRIAVRDTGHGIDPKVIERVEAN--------EMP 514 A+ HGI+P G G + I + E G R++I VRD G GID + +++ ++ Sbjct: 495 AVYHGIKPMGGNGHIRIWIGPEEGGRMKIQVRDNGVGIDASALSKLQDYHKIWNIDIDVS 554 Query: 515 GNKIGLLNVHHRVKLLYGE--GLHIRRL-EPGTEIAFYIP 551 G IGL+ R+ L+YGE IR + E GTEI F +P Sbjct: 555 GTGIGLIGTIQRIVLIYGEQASYQIRSVPEGGTEITFLLP 594 >UniRef50_C1A6M8 Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A6M8_GEMAT Length = 388 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 80/226 (35%), Positives = 121/226 (53%), Gaps = 11/226 (4%) Query: 332 MAVGLSQIISTQ--LEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPD 389 +A GL++ S Q RA +L +A L L+ +I+PHFLFN LN ISS + +P Sbjct: 153 IAAGLARAYSLQSRWREQRAVRLEAELARATLATLRQQIDPHFLFNTLNLISSLVDRDPK 212 Query: 390 TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-V 448 R++I LS LR ++E ++I +++EL + Y+ I + RFG +L + + +DE + Sbjct: 213 GVRRMIARLSELLRASLETGGRQEIPLRQELALLNAYLDIMRMRFGARLDITHTVDESLM 272 Query: 449 NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV 508 + +PS L+QPL ENA+ HGI+P +G G V + V + + + VRD G+G P Sbjct: 273 DVFVPSFLLQPLAENAMRHGIEPLRGAGRVEVQVHRADHELVMQVRDNGNGSLPDDTAPD 332 Query: 509 EANEMP-----GNKIGLLNVHHRVKLLYGEG--LHIRRLEPGTEIA 547 P IGL N R+ LYG L +RR E G +A Sbjct: 333 TPRNTPVSPDEAGGIGLGNTRARLMQLYGPAASLDLRR-EQGMTVA 377 >UniRef50_C8XT87 Putative periplasmic sensor signal transduction histidine kinase n=1 Tax=uncultured bacterium RM57 RepID=C8XT87_9BACT Length = 452 Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 84/229 (36%), Positives = 129/229 (56%), Gaps = 12/229 (5%) Query: 341 STQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSR 400 + ++E EQ R + +A L AL+ +INPHFLFN LN+I+S +R P+ AR++I L Sbjct: 218 AVRIEQKFEEQSR-LLLEARLDALRRQINPHFLFNTLNSIASLVRSQPELAREMIVKLGN 276 Query: 401 YLRYNIELKD-DEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQ 458 LR L+D D + + +EL DY+ IE RFG KL V+ +I E+ ++ +PS+L+Q Sbjct: 277 ILR--TLLRDHDAFVPLGEELAFTDDYLDIEVVRFGSKLRVVKEIAEDTLDMEVPSMLLQ 334 Query: 459 PLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP--KVIERVEANEMPGN 516 PL+EN+I HG++P G VT+ ++ I V D G G +P V + G Sbjct: 335 PLIENSIKHGLEPRISGGTVTLRSRAAQGQLIIEVEDDGVGAEPGRAVTAPMSGLVREGT 394 Query: 517 KIGLLNVHHRVKLLYGEGLHIR---RLEPGTEIAFYIP--NQRTPVASQ 560 IG+ NV R+++LYG+ + R GT++ IP N P A++ Sbjct: 395 GIGMRNVRERMQVLYGDAAEVEMVSRPGRGTKVRLVIPTGNLEEPTAAR 443 >UniRef50_C6PAR5 Histidine kinase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PAR5_CLOTS Length = 586 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 71/204 (34%), Positives = 126/204 (61%), Gaps = 8/204 (3%) Query: 353 REMANKAELRALQSKINPHFLFNALNAISSSIRL-NPDTARQLIFNLSRYLRYNIELKDD 411 +++ K EL +QS+I PHFLFN+ +AIS+ I + + A +++ L ++ R + + + Sbjct: 377 QKLKRKLELDVMQSQIKPHFLFNSFDAISALILMGDTKNASKIVKALGKFYR-SFLINGN 435 Query: 412 EQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQ 470 E+I IK+EL I +Y+ I++ RFGDK +V+ +IDE V N IP L++QPLVENA+ HG++ Sbjct: 436 EEITIKEELDIINNYLTIQKIRFGDKFSVVMNIDERVLNYKIPKLILQPLVENALNHGVR 495 Query: 471 PCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLL 530 +G+G+++I N++ + D G G+ + I+ +E+ G +GL + R+K+ Sbjct: 496 NKEGQGIISIKALYGDNQIILMTEDNGKGMSEEKIKEIESGMSKG--VGLKSTIERLKIY 553 Query: 531 YGEGLHIR---RLEPGTEIAFYIP 551 Y ++ +++ GT+I IP Sbjct: 554 YNSADVVKIYSKIDEGTKIEITIP 577 >UniRef50_Q1IJB8 Periplasmic sensor signal transduction histidine kinase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJB8_ACIBL Length = 446 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 78/205 (38%), Positives = 117/205 (57%), Gaps = 11/205 (5%) Query: 332 MAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTA 391 +A+ L + + ++E EQ R + + L ALQS+INPHFLFN LN++SS +R NPD A Sbjct: 207 VAIALKVLNNARIENKLEEQERLLL-QIRLEALQSQINPHFLFNTLNSVSSLVRFNPDKA 265 Query: 392 RQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFG-DKLTVIYDID-EEVN 449 R++I L+ LR + D + +++E+ I DY+ IE RFG DKL V +++ ++ Sbjct: 266 REMIVKLANILR-RLMRTTDAFVPLREEVDFIDDYLDIEVVRFGTDKLRVQKELEPASLD 324 Query: 450 CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVE 509 +PS+++QPLVENAI HG+ P G + + NRV I V D G G + Sbjct: 325 VMVPSMMLQPLVENAIKHGVAPRIEGGSIYLRSRVADNRVVIEVEDDGVGF-------TD 377 Query: 510 ANEMPGNKIGLLNVHHRVKLLYGEG 534 G IG+ NV R+ +LYG+ Sbjct: 378 GAPSSGTGIGMANVTERLNVLYGDS 402 >UniRef50_B8FUP0 Signal transduction histidine kinase, LytS n=3 Tax=Desulfitobacterium RepID=B8FUP0_DESHD Length = 654 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 84/233 (36%), Positives = 127/233 (54%), Gaps = 10/233 (4%) Query: 332 MAVGLSQIISTQLEVSRAEQLREMAN-KAELRALQSKINPHFLFNALNAISSSIRLNPDT 390 +AV L+++ E+S L+E + E L+S+I PHFL+NALN I S + Sbjct: 416 LAVQLTELYVKNKEISLKLALQEKETIEKEYAFLRSQIKPHFLYNALNTIISYCYSDSHK 475 Query: 391 ARQLIFNLSRYLRYNIELK-DDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV- 448 A +L+ + S YLR + + + + I I++E+ + Y+ I++ARFG K+ +I+DI E+ Sbjct: 476 AGELLRSFSNYLRGSFDFEHSNGLISIEREMMMVYGYVDIQKARFGGKVEIIFDIAPELL 535 Query: 449 NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV 508 C IP+L +QPLVENAI HGI + KG V I ++ R+ I V D G GI + + Sbjct: 536 QCQIPALSVQPLVENAIRHGIIQKEAKGTVRIKISRESGRIMIQVTDDGIGIPEQQRMEI 595 Query: 509 EANEMPGN------KIGLLNVHHRVKLLYGEGLHIRRLE-PGTEIAFYIPNQR 554 NE G +GL NV R+K +G L I E GT++ F I + Sbjct: 596 LNNEKEGTGKKTLGGVGLYNVQKRLKHTFGSVLKIESTEGTGTKVYFEIDESK 648 >UniRef50_Q028U8 Signal transduction histidine kinase, LytS n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q028U8_SOLUE Length = 373 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 80/218 (36%), Positives = 127/218 (58%), Gaps = 19/218 (8%) Query: 342 TQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRY 401 ++L+ R E+L + +A+LR+L+ +I+PHFLFNALNAISS + +P +AR +I +L Sbjct: 151 SELQRERTERL---STQAQLRSLRLQIDPHFLFNALNAISSEVEADPVSARNMIEHLGNL 207 Query: 402 LRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPL 460 LR ++ D + + + +EL + Y+AI++ RFGD+L IDE+V + +PS+ IQPL Sbjct: 208 LRLTLDTNDRQLVPLFEELSFLDHYLAIQRIRFGDRLRFEQVIDEDVRHVLVPSMTIQPL 267 Query: 461 VENAIVHGIQPCKGKGVVTISVAECGNR-VRIAVRDTGHGIDPKVIERVEANEMPGNKIG 519 VEN+I HG+ G+V ++ C + +RI V D G G+ A+ PG +G Sbjct: 268 VENSIRHGLSQRAKGGLVRVAARRCDEQHIRITVEDDGVGL--------PADWSPGKSLG 319 Query: 520 L-LNV-HHRVKLLYGEGLHI----RRLEPGTEIAFYIP 551 L L++ R+ LY + RR GTE+ +P Sbjct: 320 LGLSITAQRLAALYPRQDSVFDVRRRAGGGTEVEMRLP 357 >UniRef50_Q21EF5 Sensory transduction protein kinase AlgZ n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21EF5_SACD2 Length = 343 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 78/208 (37%), Positives = 110/208 (52%), Gaps = 12/208 (5%) Query: 359 AELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKK 418 A ALQS+I PHFLFN++N I+S I ++P+TA +++ NLS R L + + +K Sbjct: 134 ARFDALQSRIRPHFLFNSMNTIASLIAVDPETAERMVVNLSHLFRAT--LSESRLVPLKN 191 Query: 419 ELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-----CCIPSLLIQPLVENAIVHGIQPCK 473 EL KDY+A+EQ R G++L + + EVN IPSLL+QPL+ENAI HGIQP Sbjct: 192 ELQLCKDYVAMEQLRLGNRLRMEWRYGAEVNDVSASQTIPSLLLQPLIENAIYHGIQPLP 251 Query: 474 GKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYG- 532 G + +SV V I V + GN + L N+ HR+ LYG Sbjct: 252 EGGDIVVSVDVSDKTVTIVVTNPVSSPKSNQPASETGAASSGNGLALANIRHRLTALYGS 311 Query: 533 EGLHIRRLEPGTEIAFYIPNQRTPVASQ 560 EG+ ++ E A + R PV + Sbjct: 312 EGV----VQVDKEDAVFTVTLRYPVQTN 335 >UniRef50_Q023F5 Signal transduction histidine kinase, LytS n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q023F5_SOLUE Length = 399 Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 77/215 (35%), Positives = 128/215 (59%), Gaps = 12/215 (5%) Query: 341 STQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSR 400 +T+L + ++ QL N+A+L AL++++NPHFLFN+L IS + +P TA +++ L Sbjct: 172 ATRLALEKS-QLESSLNQAQLEALRARLNPHFLFNSLQNISVLTKQDPQTASRMLTVLGD 230 Query: 401 YLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQP 459 LR + + + +E+ + ++A+EQ RFGD+L V +DI +EV +PS L+QP Sbjct: 231 LLRAVLRNDSQPETSLNEEIDLTRSFVALEQMRFGDRLHVTFDIADEVQQALVPSFLMQP 290 Query: 460 LVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIG 519 ++ENAI+HG++ + G++ + AE + + I V D +GI P EA++M +G Sbjct: 291 ILENAIIHGLRGVRKTGIIKVRAAEEEHALAITVTD--NGIGPP----AEASQMKIG-VG 343 Query: 520 LLNVHHRVKLLYGE--GLHIRRL-EPGTEIAFYIP 551 L + R+ +Y E G IRRL E GTE+ +P Sbjct: 344 LGSTCERLTRMYPERHGFSIRRLQEGGTEVRITLP 378 >UniRef50_Q5WIY4 Two-component sensor histidine kinase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WIY4_BACSK Length = 599 Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 84/243 (34%), Positives = 135/243 (55%), Gaps = 15/243 (6%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQ-LREMANKAELRALQSKINPHFLFNALNAISS 382 QI+ L +M L++ I+ LE + + L N+ + + + S++NPHFLFN L AI Sbjct: 356 QISLQLNKMIDDLNESIAQLLEANEQKTALERKQNEMKFKMMASQMNPHFLFNTLEAIRM 415 Query: 383 SIRLNPDTA-RQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVI 441 ++ +T + + L + LR ++E+ I +K+EL ++ Y+ I+ R+G++LT Sbjct: 416 RAHMSNETDIAKAVKRLGQLLRKSLEVGSS-MIPLKEELEMVRSYLEIQSFRYGERLT-- 472 Query: 442 YDIDEEV---NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGH 498 YD+D+ V N + L IQPLVENA+ HG++ + G V I + + + I V D G Sbjct: 473 YDMDDAVTIDNVAVIPLTIQPLVENAVSHGLEAKEADGYVNIRIKQAEDGTWIEVSDNGI 532 Query: 499 GIDPKVIERVEAN-----EMPGNKIGLLNVHHRVKLLYG-EGLHIRRLE-PGTEIAFYIP 551 G+ P+ + V+A E P N+IGL NVH R+K YG +GL I + GT + F IP Sbjct: 533 GMGPQRQQEVQAMIEDPLEKPENRIGLRNVHQRLKQTYGTDGLLISSSQGEGTTVRFLIP 592 Query: 552 NQR 554 + Sbjct: 593 KEE 595 >UniRef50_A4A8V1 Sensor protein lytS n=2 Tax=unclassified Gammaproteobacteria RepID=A4A8V1_9GAMM Length = 365 Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 79/224 (35%), Positives = 126/224 (56%), Gaps = 14/224 (6%) Query: 335 GLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDT--AR 392 G+ + +Q E R + MA +A+L+ L+ ++NPHFLFN LNAIS+ I L+ DT A Sbjct: 144 GIKYYLLSQEEKQRYLKAISMAQEAQLKMLRYQLNPHFLFNTLNAISTLI-LDKDTELAN 202 Query: 393 QLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCC 451 ++ LSR+LRY+++ +QI + +E+ +K Y+ IE+ RFG++LT+ + I E Sbjct: 203 GMVMKLSRFLRYSLDNDPMQQISVAEEVESLKLYLDIEEVRFGERLTLHFAISEAAEKAL 262 Query: 452 IPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN 511 +PSLL+QPLVEN+I + + G + +S +++ V D G G+D + Sbjct: 263 MPSLLLQPLVENSIKYAVSRSINGGSIAVSATVEDGCLQLVVADDGPGLD------LRQG 316 Query: 512 EMP-GNKIGLLNVHHRVKLLYGEGLHIR--RLEP-GTEIAFYIP 551 +P G +GL N R+ +YG+ R EP G I +IP Sbjct: 317 RLPKGGGVGLANTRERLTQIYGDKQSFRLSSTEPHGLTITIFIP 360 >UniRef50_A3DFT2 Signal transduction histidine kinase, LytS n=5 Tax=Clostridiales RepID=A3DFT2_CLOTH Length = 574 Score = 127 bits (320), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 72/220 (32%), Positives = 123/220 (55%), Gaps = 8/220 (3%) Query: 319 YCHAHQITSSLQEMAVGLSQIISTQLEVS-RAEQLREMANKAELRALQSKINPHFLFNAL 377 Y + QE+ Q++ + E+ R +L E E+R L+ KINPHFLFN L Sbjct: 327 YSLRPHVFEEFQELNDTFRQMVLQREELQKRNNELMERKRIMEIRQLEEKINPHFLFNVL 386 Query: 378 NAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDK 437 + + ++P A ++I + +RYNI +D + +K ++ +KDY+ +++ R+ + Sbjct: 387 ETLRYEVMIDPAKASEMIMAFANIMRYNIYYRDT-IVPLKTDIEHVKDYLMLQKMRYNRR 445 Query: 438 LTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 LT DI EE + C +P L+IQP+VENA+ HG++ + V + E N +R++V D Sbjct: 446 LTYSIDIPEELMECKVPKLVIQPIVENALKHGMKNVETINVNITASVENEN-LRLSVEDN 504 Query: 497 GHGIDPKV----IERVEANEMPGNKIGLLNVHHRVKLLYG 532 G GI+P++ I+ +E ++ IG+ N H ++LLYG Sbjct: 505 GSGIEPEILNELIKDLEREDVYKEHIGMYNSHRVIRLLYG 544 >UniRef50_B9MP60 Signal transduction histidine kinase, LytS n=2 Tax=Clostridia RepID=B9MP60_ANATD Length = 600 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 84/243 (34%), Positives = 139/243 (57%), Gaps = 14/243 (5%) Query: 324 QITSSLQEMAVGLSQIISTQLEVS-RAEQLREMANKAELRALQSKINPHFLFNALNAIS- 381 Q+ MA + +++ +++ R ++L +AE+ ALQS+INPHFLFN L I Sbjct: 349 QVIEEFNIMARKIKELLEKEIKYELRQKELALEKKQAEINALQSQINPHFLFNTLETIRM 408 Query: 382 -SSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTV 440 S ++ +TA + L++ L+ +I ++D I I++E+ I DY+ I++ RFG+KL Sbjct: 409 RSMLKKEFETANAIKL-LAKLLKRSIRWEND-LITIEEEISAIYDYLEIQKYRFGEKLKF 466 Query: 441 IYDIDEEVNCC-IPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHG 499 ++DE+V IP + IQPLVENA VHGI+ KG+G + + V + G+ + I V D G G Sbjct: 467 EIEVDEDVKSTKIPKMTIQPLVENACVHGIENSKGEGRIVVKVLKEGDMIAIHVEDNGKG 526 Query: 500 I-DPKVIERVEANE-MPGNK---IGLLNVHHRVKLLYGEGLHIRRLEP---GTEIAFYIP 551 + D K+ E + + + + +K +GL NV R++L Y + L G ++ IP Sbjct: 527 LEDDKITELLRSVKGLSSDKVSSVGLKNVFRRLELFYNKDFSFEILRSQLGGLKVVIKIP 586 Query: 552 NQR 554 N+R Sbjct: 587 NKR 589 >UniRef50_A1ZYA0 Regulator of cell autolysis n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYA0_9SPHI Length = 376 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 64/182 (35%), Positives = 109/182 (59%), Gaps = 4/182 (2%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 I + + + A S+I +L++ +L+++ +AEL AL +++NPHFL+N LN+I+S I Sbjct: 142 IFTKIHQRAQLDSKITEQELKLM---ELKQLKTQAELDALHARVNPHFLYNTLNSIASLI 198 Query: 385 RLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDI 444 NPD A Q+ LS++ RYN K++ I +EL + Y+ IE+ RFGD+L D+ Sbjct: 199 HANPDKAEQMTLLLSKFFRYNTNRKNNHLTTIGEELDMVATYLEIEKVRFGDRLNYQLDL 258 Query: 445 DEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPK 503 V N IP L+QPLVENA+ HGI KG +++++ +++++ + D G + Sbjct: 259 PPGVKNYLIPRFLLQPLVENALKHGIAKLAEKGKLSLTINTENDQIKVMIGDNGPAFSDE 318 Query: 504 VI 505 ++ Sbjct: 319 LV 320 >UniRef50_C7IC54 Signal transduction histidine kinase, LytS n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IC54_9CLOT Length = 634 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 74/211 (35%), Positives = 118/211 (55%), Gaps = 4/211 (1%) Query: 346 VSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYN 405 VSR + A +AE+ L+++I PHFL+N+L+ I++ P A+ L+++L+ YLR + Sbjct: 417 VSRLSISMQQAQEAEISFLRAQIKPHFLYNSLSVIAAQTTQEPQKAKNLLYDLTDYLRGS 476 Query: 406 IELK-DDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENA 464 K D +I + +E+ ++ Y++IEQARF + L + YDI+E ++ +P L +QP+VENA Sbjct: 477 FHFKTQDGKIPLSEEINTVRAYLSIEQARFDNLLMMEYDIEENLDAMVPLLCLQPIVENA 536 Query: 465 IVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVH 524 + HGI G V + + G+ V I V D G GI +E + G +GL N+ Sbjct: 537 VRHGIFKRAEGGRVLLRIRRKGDLVIIRVEDNGVGIPQVQLESIRHGNSGG--VGLKNIQ 594 Query: 525 HRVKLLYGEGLHIRRLE-PGTEIAFYIPNQR 554 R+ G GL I E GT + IP + Sbjct: 595 MRLGTHRGAGLEIESTEGEGTVVTLKIPYEE 625 >UniRef50_B8FP92 Sensor protein n=1 Tax=Desulfitobacterium hafniense DCB-2 RepID=B8FP92_DESHD Length = 1016 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 76/191 (39%), Positives = 115/191 (60%), Gaps = 6/191 (3%) Query: 356 ANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQID 415 A KAE+ LQS+I PHFLFNALNAI + + A QLI +LS YLR E + D + Sbjct: 815 ALKAEMDFLQSQIKPHFLFNALNAIITLCGTDGLRAEQLITHLSYYLRRCFEPRTDSFLL 874 Query: 416 IKKELYQIKDYIAIEQARFGDKLTVIYDIDEE--VNCCIPSLLIQPLVENAIVHGIQPCK 473 ++ EL ++ Y+ IE+ARF D+LTV+Y++D + +P L IQPLVENAI HG+ + Sbjct: 875 LQDELRLVEAYVEIEKARFEDRLTVLYEVDPGALLKRILP-LTIQPLVENAIRHGVMKRE 933 Query: 474 GKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNK---IGLLNVHHRVKLL 530 G + +++ G+RV + V D G GI + ++ + ++ ++ +GL N+ R+K Sbjct: 934 EGGTIRLTIQLAGDRVHVEVWDNGVGIREEQLKNLWLSDNSSSERRGVGLANIQRRLKHF 993 Query: 531 YGEGLHIRRLE 541 GE LH+ E Sbjct: 994 CGEELHVTSRE 1004 >UniRef50_A5G4A3 Signal transduction histidine kinase, LytS n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G4A3_GEOUR Length = 367 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 78/237 (32%), Positives = 126/237 (53%), Gaps = 20/237 (8%) Query: 296 EIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREM 355 E H L++ + +V G YY ++ + +A ++ + +LE +EQ Sbjct: 119 EKHPNLLVTILLVSLVFGPAISYYFYSRGV------IAETMAALHQEELERISSEQ---R 169 Query: 356 ANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQID 415 +A R LQ++I PHFLFN L+ I S IR PDTA Q++ N + YLR +++ ++I Sbjct: 170 LTEANFRMLQAQIEPHFLFNTLSNILSLIRTRPDTAEQMLGNFTDYLRASLQQTRVDRIS 229 Query: 416 IKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKG 474 +++EL ++ Y+ I R +L D+ E+ N +P LLIQPLVENA+ HGI+P Sbjct: 230 LQEELAIVRSYLDIMTVRMEKRLQYHIDVPPELDNVMVPPLLIQPLVENAVKHGIEPKAE 289 Query: 475 KGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLY 531 GV+T+ + + + V DTG GI P + +G+ N+ R++LLY Sbjct: 290 GGVITVHAERESDMLILEVIDTGEGISP----------LSSMGVGMTNIRDRLQLLY 336 >UniRef50_B8I4I2 Putative sensor with HAMP domain n=2 Tax=Clostridium RepID=B8I4I2_CLOCE Length = 594 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 79/206 (38%), Positives = 121/206 (58%), Gaps = 10/206 (4%) Query: 358 KAELRALQSKINPHFLFNALNAI-SSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDI 416 +AE+ LQS++NPHFLFN LNAI S++ N +I LS+ LR + KDD + I Sbjct: 389 RAEINFLQSQMNPHFLFNTLNAILVVSVKNNYTEIVDVIKYLSKTLRRLLSWKDD-LVTI 447 Query: 417 KKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGK 475 ++EL + Y+ IE+ RF DK +++E + + IP + +QPLVENA HGIQ K Sbjct: 448 EEELSFTEMYLKIEKFRFCDKFHYNINVNETLLDYQIPKMSLQPLVENACKHGIQTIKEV 507 Query: 476 GVVTISVAECGNRVRIAVRDTGHGID----PKVIERVEANEMPGNKIGLLNVHHRVKLLY 531 GV+ I++ C + +R++V+D G GID +I+ V++ IG+ NV+ R++L Y Sbjct: 508 GVININIDMCESGLRVSVKDNGSGIDQYTLSGIIDNVKSEVEQSTSIGIRNVYRRLRLYY 567 Query: 532 GEGLHIRR---LEPGTEIAFYIPNQR 554 GE + + GT I F IP ++ Sbjct: 568 GENISFNIESCINTGTTIYFTIPFEK 593 >UniRef50_Q9KBL7 Two-component sensor histidine kinase n=1 Tax=Bacillus halodurans RepID=Q9KBL7_BACHD Length = 597 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 93/275 (33%), Positives = 149/275 (54%), Gaps = 17/275 (6%) Query: 291 AHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAE 350 +H + I+ + L K VV G +I Q++ +M L +I E +R + Sbjct: 324 SHLSERINQVASGDLKTKIVVDGKDEI-----GQLSVQFNQMVANLRSLIHQVHETNRQK 378 Query: 351 QLREMA-NKAELRALQSKINPHFLFNALNAISSSIRLNPDTA-RQLIFNLSRYLRYNIEL 408 +L E + N+ +L+ L S+INPHFLFN L +I + +T +++ L + +R ++E+ Sbjct: 379 RLLEKSQNEIKLKMLASQINPHFLFNTLESIRMKSHMKGETEIAKVVKQLGKLMRKSLEV 438 Query: 409 KDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCC-IPSLLIQPLVENAIVH 467 I ++ EL ++ Y+ I+ R+GD+L ID + I L+IQPLVENA++H Sbjct: 439 TG-HHIPLRNELDMVRCYLEIQTFRYGDRLHYELYIDPQSEMVEILPLIIQPLVENAVIH 497 Query: 468 GIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVE-----ANEMPGNKIGLLN 522 G++ + G VTIS GN + + V D G G+D + +E ++ E+ GNKIGLLN Sbjct: 498 GLERTEDGGTVTISTIVNGNDLTVIVNDDGCGMDEEKLEAIQNMLHHPQEVDGNKIGLLN 557 Query: 523 VHHRVKLLYGE--GLHIRRLE-PGTEIAFYIPNQR 554 VH R++L YG+ GL I + GT + F I R Sbjct: 558 VHKRLQLTYGKTSGLIIESAKGKGTCVRFTISQIR 592 >UniRef50_C6IXH6 Histidine kinase internal region n=2 Tax=Bacillales RepID=C6IXH6_9BACL Length = 598 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 79/206 (38%), Positives = 117/206 (56%), Gaps = 10/206 (4%) Query: 358 KAELRALQSKINPHFLFNALNAI-SSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDI 416 +AEL LQS++NPHFLFN LNAI + N +I NLS+ LR + K+D + + Sbjct: 388 RAELNFLQSQMNPHFLFNTLNAILVVCTKKNYSDVTDIIKNLSKLLRRLLRWKED-LVTL 446 Query: 417 KKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGK 475 ++E+ I Y+ IE+ RF DK ++DI+E ++ IP + IQPLVENA HGIQ +G Sbjct: 447 EEEIRFIDMYLKIEKFRFRDKFEYVFDIEEAALHYTIPKMSIQPLVENACKHGIQAVQGN 506 Query: 476 GVVTISVAECGNRVRIAVRDTGHGIDPKVIER----VEANEMPGNKIGLLNVHHRVKLLY 531 G+VT+ R+RI + D G GI P+ + V + GN IG+ NV+ R +L Y Sbjct: 507 GLVTVKARVEDGRLRIVISDNGKGIKPEQLREMLLTVRSENTSGNSIGIRNVYRRFELYY 566 Query: 532 GEGLHIR---RLEPGTEIAFYIPNQR 554 + + + GT++ IP +R Sbjct: 567 NDQVRFNIDSKPGQGTKVCIEIPVKR 592 >UniRef50_P94586 Putative uncharacterized protein ywpD n=4 Tax=Bacillus subtilis group RepID=YWPD_BACSU Length = 278 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 73/206 (35%), Positives = 119/206 (57%), Gaps = 9/206 (4%) Query: 352 LREMANKA---ELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIEL 408 ++ AN+A E+ LQS+I PHFL+N LN I S L+ + AR++ + YLR + + Sbjct: 57 MKHTANQATRMEMAFLQSQIKPHFLYNVLNTIISLTHLDIEKAREVTEEFTNYLRMSFDF 116 Query: 409 KDDEQID-IKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVH 467 ++ I + EL I Y++IE+ RF ++L V++DIDE+++ +P L+IQPLVENA++H Sbjct: 117 QNTSAISSFRHELSIINSYLSIEKTRFSNRLEVLFDIDEDIDFILPPLMIQPLVENAVLH 176 Query: 468 GIQPCKGKGVVTISV-AECGNRVRIAVRDTGHGIDP-KVIERVEANEMPGNKIGLLNVHH 525 G+ +G G + ++ + N I V D G GI P K I+ + + +GL N++ Sbjct: 177 GVSKKRGGGWIKLTAKKQSKNEYHIKVEDNGPGITPEKQIDLLSTD--FDRSVGLKNINQ 234 Query: 526 RVKLLYGEGLHIRRL-EPGTEIAFYI 550 R+K G L I + GT ++ I Sbjct: 235 RLKHFCGSELMISSTPDAGTSVSMLI 260 >UniRef50_A1TXX1 Sensory transduction protein kinase AlgZ n=3 Tax=Marinobacter RepID=A1TXX1_MARAV Length = 372 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 71/185 (38%), Positives = 109/185 (58%), Gaps = 10/185 (5%) Query: 350 EQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELK 409 +Q RE +A L +LQ++I PHFLFN++N I+S I NP+ A + + +LS R ++ Sbjct: 162 QQQREAEMQARLTSLQARIQPHFLFNSMNTIASLIATNPEQAEEAVLDLSELFRASLR-T 220 Query: 410 DDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHG 468 DD+ I + +EL + Y+AIE R G++L + +DI + IP L +QPLVENAI HG Sbjct: 221 DDQLIPLNRELELCQRYLAIESLRLGERLQLEWDIQPGLGQQVIPPLTLQPLVENAIYHG 280 Query: 469 IQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVK 528 IQP GVV + V+ + V + V++ P+ ER + GN++ L N R++ Sbjct: 281 IQPRPEGGVVRVEVSAKDHFVYLLVQNPA----PESTER----QHQGNRVALSNTQARLQ 332 Query: 529 LLYGE 533 L+GE Sbjct: 333 ALFGE 337 >UniRef50_B8FU66 Signal transduction histidine kinase, LytS n=2 Tax=Desulfitobacterium hafniense RepID=B8FU66_DESHD Length = 408 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 70/192 (36%), Positives = 109/192 (56%), Gaps = 2/192 (1%) Query: 354 EMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQ 413 E A K EL LQ++I PHFL+NA+N + S + + A L+ N S+YLR ++ Sbjct: 204 EEAAKNELAFLQAQIKPHFLYNAINTMVSFCHTDSERAASLLINFSKYLRLVFDVDHKSM 263 Query: 414 -IDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQP 471 + +++E+ IK Y+AIE+ARFG ++++ Y I+ E+ + IPS +QPLVENAI HG+ Sbjct: 264 LVSLEREIELIKAYVAIEKARFGGQISIEYTIEPELLSMEIPSFCLQPLVENAIKHGLCK 323 Query: 472 CKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLY 531 G V IS + + I + DTG G+ + + +++ +E +G NV RVK Sbjct: 324 KAAGGTVLISAQKSEGTIIIKISDTGIGMGAEQLNKLKNSESSKEGVGFFNVSRRVKSWQ 383 Query: 532 GEGLHIRRLEPG 543 L I+ E G Sbjct: 384 DAQLDIQSTEGG 395 >UniRef50_UPI0001B9ED30 integral membrane sensor hybrid histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ED30 Length = 1051 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 68/199 (34%), Positives = 116/199 (58%), Gaps = 3/199 (1%) Query: 358 KAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKD-DEQIDI 416 + E LQ++I+PHFLFN LN+I + ++ D R L S YL+ + ++ D + + Sbjct: 848 RMEAAYLQAQIHPHFLFNTLNSIMALSEMDIDRMRSLGEAFSSYLQISFHYRNQDRLVPL 907 Query: 417 KKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKG 476 ++EL I+ Y+ +E R+G++L V +++D ++N IP L IQPL+ENA+ HGI G Sbjct: 908 QQELELIQAYLYVETERYGERLNVTWEVDWDLNVLIPPLAIQPLLENAVRHGIMKRASGG 967 Query: 477 VVTISVAECGNRVRIAVRDTGHGIDP-KVIERVEANEMPGNKIGLLNVHHRVKLLYGEGL 535 + + +A + + + V D G G++P +V + + A + IGL N + R+ +G GL Sbjct: 968 TIRVRIAMQEDFIIVEVTDNGLGMEPDQVTQLLNAPDHRKGGIGLYNTNRRLLQTFGSGL 1027 Query: 536 HIRR-LEPGTEIAFYIPNQ 553 I+ + GT ++F IP Q Sbjct: 1028 VIKSTMNQGTTVSFQIPAQ 1046 >UniRef50_B8KJQ3 Sensor histidine kinase n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KJQ3_9GAMM Length = 369 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 82/248 (33%), Positives = 136/248 (54%), Gaps = 17/248 (6%) Query: 314 TLKIYYCHAHQITSSL---QEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINP 370 TL +Y+ ++ S + + G+ + +Q R + MA++A+L+ L+ ++NP Sbjct: 120 TLAMYFSNSISGVSVMLVWSALYFGIKYYLLSQEAKERYLKAISMAHEAQLKMLRYQLNP 179 Query: 371 HFLFNALNAISSSIRLNPDT--ARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIA 428 HFLFN LNAIS+ I L+ DT A ++ LSR+LRY+++ +QI + +E+ +K Y+ Sbjct: 180 HFLFNTLNAISTLI-LDKDTELANGMVMKLSRFLRYSLDNDPMQQITVAEEIESLKLYLD 238 Query: 429 IEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGN 487 IE+ RF ++LT+ + I E +PSLL+QPLVEN+I + + G + +S + Sbjct: 239 IEEVRFAERLTLHFAISEAAEQALMPSLLLQPLVENSIKYAVSRSINGGSIAVSASIEDG 298 Query: 488 RVRIAVRDTGHGIDPKVIERVEANEMP-GNKIGLLNVHHRVKLLYGEGLHIR--RLEP-G 543 +++AV D G G+D + +P G +GL N R+ +YG+ R EP G Sbjct: 299 CLQLAVADDGPGLD------LRQGRLPKGGGVGLANTRERLTQIYGDKQSFRLSSTEPHG 352 Query: 544 TEIAFYIP 551 I IP Sbjct: 353 LTITICIP 360 >UniRef50_Q9KBB5 Sensor protein n=1 Tax=Bacillus halodurans RepID=Q9KBB5_BACHD Length = 914 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 82/227 (36%), Positives = 127/227 (55%), Gaps = 16/227 (7%) Query: 331 EMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDT 390 E+ V + +I +L+ S E+LR E LQ++I PHFLFN LN I+S ++ Sbjct: 693 ELKVRIRAVI--ELKHSIQERLR-----MEAAWLQAQIQPHFLFNTLNTIASLSEIDTKR 745 Query: 391 ARQLIFNLSRYLRYNIELKD-DEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN 449 L+ ++LR + + ++ + I EL + Y+ IEQ RFG++L V +D DE V Sbjct: 746 MAALLEKFGQFLRKSFDGQNIHSLVPITHELALTESYVYIEQERFGERLKVHWDKDEHVV 805 Query: 450 CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV- 508 C +P L IQPLVENA+ HG+ G V I + + V+I + D G G+D + V Sbjct: 806 CNLPPLSIQPLVENALKHGVLKKPEGGNVHIRIKKQEETVKIMITDDGVGMDKATLNNVL 865 Query: 509 --EANEMPGNKIGLLNVHHRVKLLYGEGLHIRRLEP--GTEIAFYIP 551 + +++ G IG+LN R+K L+G+GL + +P GT I+FY+P Sbjct: 866 TRKPDQVSG--IGMLNTDLRLKQLFGKGLFVES-QPGKGTSISFYVP 909 >UniRef50_D0MJT6 Signal transduction histidine kinase, LytS n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MJT6_RHOM4 Length = 389 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 74/233 (31%), Positives = 124/233 (53%), Gaps = 21/233 (9%) Query: 332 MAVGLSQ--IISTQLEVSRAEQLREMA-------NKAELRALQSKINPHFLFNALNAISS 382 +A G ++ + Q A QLR A +A L+AL+ ++NPHFLFN L+AIS+ Sbjct: 150 LAAGFARDYFLRYQQRQQEAAQLRAQAADLQARLTEARLQALRMQLNPHFLFNTLHAISA 209 Query: 383 SIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIY 442 + +P R +I LS LRY ++ +++ + +EL ++ Y+ I+Q RF +L V Sbjct: 210 LVERDPKGVRHMIARLSELLRYTLDESGAQEVPLAQELRFMEGYLDIQQIRFQGRLEVKQ 269 Query: 443 DIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGID 501 +ID +V +P+L++QP+VENAI HG+ + G +T+ G+++ + VRD G G+ Sbjct: 270 EIDPDVLEALVPNLILQPIVENAIKHGVSRLETTGRITLRAWREGDQLWLCVRDNGPGLS 329 Query: 502 PKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRRLEP---GTEIAFYIP 551 N +GL N R++ LYG+ + +P G E+ +P Sbjct: 330 --------GNGQGQEGLGLRNTRARLEGLYGDAYRMELRQPPEGGMEVCISLP 374 >UniRef50_C0C5Z3 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C5Z3_9CLOT Length = 248 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 79/220 (35%), Positives = 122/220 (55%), Gaps = 24/220 (10%) Query: 354 EMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQ---LIFNLSRYLRYNIELKD 410 E+ + ++L ALQS+INPHFL+N L +I + L D A Q + L+ Y RYNI Sbjct: 26 ELNSSSQLMALQSQINPHFLYNTLESIRAQAEL--DDALQISEMTEALAAYFRYNINRGG 83 Query: 411 DEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNC----CIPSLLIQPLVENAIV 466 D + ++ EL I +Y+ I+Q RFG++ ++ + ID + N IP L IQP+VENAI Sbjct: 84 D-VVPLEDELANISNYLHIQQFRFGERFSISFMIDGDRNTINNQAIPKLTIQPIVENAIY 142 Query: 467 HGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN-----EMPGNK---- 517 HG++ G +TI V E R+ +++ D G GID + +E + + G++ Sbjct: 143 HGLEETLTSGKITIRVTETEKRILLSISDNGKGIDYEQLEMIHRDLQADTSASGSERTTG 202 Query: 518 IGLLNVHHRVKLLYGEGLHIRRLEP----GTEIAFYIPNQ 553 I L N+H R++LL+G+ I LE GT + +P Q Sbjct: 203 IALSNIHRRIQLLFGDSFGI-ALESTPMVGTTVHITMPKQ 241 >UniRef50_C5BUE4 Signal transduction ATPase, FimS family n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BUE4_TERTT Length = 382 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 78/225 (34%), Positives = 128/225 (56%), Gaps = 17/225 (7%) Query: 339 IISTQLEVSRAEQ-LREM-----ANKAELRALQSKINPHFLFNALNAISSSIRLNPDT-A 391 + S +L+ R E+ L+ + A +A+L+ L+ ++NPHFLFN LNAIS+ + L ++ A Sbjct: 158 VFSLRLDADRREEHLKRLEAETTAKEAQLKMLRYQLNPHFLFNTLNAISALVHLKENSKA 217 Query: 392 RQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NC 450 R+++ LS +LR+++ Q +++EL+ + Y+ IEQARF D+L+V ++ E Sbjct: 218 REMLVRLSEFLRFSLANDPKLQTSLEQELHALTLYLQIEQARFADRLSVRVEVTPEARRS 277 Query: 451 CIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEA 510 +PSLL+QPL+ENA+ +GI + G + I + I V D G G +E+ + Sbjct: 278 AVPSLLLQPLIENAVKYGIANKEDGGEIKIQGFVAKGVLTIVVADDGPGFSS--VEQTTS 335 Query: 511 NEMPGNKIGLLNVHHRVKLLYGE--GLHIRRLEP-GTEIAFYIPN 552 G +GL N R+ LLYGE L +R E G ++ IP+ Sbjct: 336 ----GRGVGLRNTRERLHLLYGEESKLDMRNREAGGAQVKLRIPH 376 >UniRef50_C6J5N7 Putative uncharacterized protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J5N7_9BACL Length = 591 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 85/233 (36%), Positives = 138/233 (59%), Gaps = 18/233 (7%) Query: 336 LSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAIS--SSIRLNPDTARQ 393 LSQ I +E A++ + + E R LQS+I+PHFL+N LN+I ++I+ N Sbjct: 364 LSQDILMLMESRVADE--KQKQELEYRMLQSQISPHFLYNTLNSIRWMATIQ-NATGIAD 420 Query: 394 LIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTV--IYDIDEEVNCC 451 ++ +LSR LR +I + + +++EL + DY I++ R+G +T+ I D +E ++ Sbjct: 421 MVTSLSRLLR-SIAKDQRKLVPLQEELSLMNDYFLIQKYRYGGTITMEQIIDNEELLSSL 479 Query: 452 IPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV-EA 510 +P +QPLVENAI HGI+P KG+G +T+SVA+ G +RI + D G G+ IE + Sbjct: 480 VPRFTLQPLVENAIFHGIEP-KGRGNITVSVAKSGYDMRITIEDNGVGMSEAQIEAILSK 538 Query: 511 NEMPGNK-----IGLLNVHHRVKLLYGE--GLHIR-RLEPGTEIAFYIPNQRT 555 E PG+K IGL +VH R++L +G+ GL I +L T + +P +++ Sbjct: 539 QEEPGSKGLFENIGLRSVHDRLRLTFGDRYGLSIESKLNEFTRMHLLLPCRKS 591 >UniRef50_C6CVD9 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVD9_PAESJ Length = 481 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 78/247 (31%), Positives = 143/247 (57%), Gaps = 19/247 (7%) Query: 325 ITSSLQEMAVGLSQIIS-----TQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 + + M + ++ +IS QLE S ++ + + +++LR+LQS+INPHFLFN L+ Sbjct: 234 LAKTFDRMRININNLISEIQTKAQLE-SELQKNKLLLQESQLRSLQSQINPHFLFNTLDT 292 Query: 380 ISSSIRLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 +S L L+ +++R LRYN++ + D + + +E+ +++YI I++ RF ++L Sbjct: 293 LSKKAYLEGSLETSDLLTSVARLLRYNLK-RLDRPVTLYEEVRVLREYIFIQKTRFTERL 351 Query: 439 TVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTG 497 + ++DE+ ++ IP L IQP++ENA++H I+P + G +T V + G+ + I + D G Sbjct: 352 RFVEEVDEDCLHVQIPGLTIQPIIENAVIHAIEPLEDGGTITFRVRDEGSEIMIEIEDEG 411 Query: 498 HGIDPKVI-----ERVEANEMPGNK--IGLLNVHHRVKLLYG-EGLHIRRLE--PGTEIA 547 GI + I +R + E G+ IG NV +R++L YG E + + E GT++ Sbjct: 412 SGISEEKISHIMEDRFASQEGDGHSTGIGFGNVINRLRLYYGREDVMAIQSEVGKGTKVI 471 Query: 548 FYIPNQR 554 +P +R Sbjct: 472 LKLPKER 478 >UniRef50_A6G242 Histidine kinase internal region n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G242_9DELT Length = 374 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 72/198 (36%), Positives = 108/198 (54%), Gaps = 13/198 (6%) Query: 358 KAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIK 417 +AEL AL+++++PHFLFNALN ++ + +P A + + LSR LR +E E + ++ Sbjct: 183 EAELAALRARVDPHFLFNALNTVADLVEHSPPQAVRAVEELSRLLRSALEGSRHETVSLE 242 Query: 418 KELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKG 476 EL ++DY+A+E+ RF D+L V +ID V IP LL+QPLVENAI H + Sbjct: 243 HELALVQDYLALERLRFEDRLRVRLEIDVNVTQTQIPPLLVQPLVENAIRHAVANSPTGA 302 Query: 477 VVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLH 536 VT+ E G R+ + V D G G + + G K G +V R++LLY E Sbjct: 303 TVTVRAREDGPRLVLTVEDDGPG---------SSVDSQGTKTGEHSVRRRLELLYAERAR 353 Query: 537 IR---RLEPGTEIAFYIP 551 + RL G + +P Sbjct: 354 LEAGPRLGGGWRVVLALP 371 >UniRef50_C6LLN0 Putative sensor histidine kinase n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LLN0_9FIRM Length = 603 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 78/222 (35%), Positives = 128/222 (57%), Gaps = 15/222 (6%) Query: 346 VSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDT-ARQLIFNLSRYLRY 404 ++R +L+ A L+ALQ++INPHFL+N L +I+ +N DT +++ +L +++R+ Sbjct: 379 ITREYKLKLQERDANLQALQNQINPHFLYNTLESITMMAEINDDTDVAEMVTDLGKFMRF 438 Query: 405 NIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVEN 463 + + D + + +EL +++Y+ I+ R+ +++ D E++ + I L IQP+VEN Sbjct: 439 TLTTR-DAMVRLSEELACVENYVQIQNVRYDHCISLSVDCPEKLADNRIVKLSIQPVVEN 497 Query: 464 AIVHGIQPCKGKGV-VTISVAECGNRVRIAVRDTGHGIDP-------KVIERVEANEMPG 515 AI+HG G G+ + I V E + + I + D G G+DP K +E+ E E PG Sbjct: 498 AILHGTGGA-GSGIHLRIRVREENSDMEILIADDGQGMDPETLAGVIKNLEQGEETERPG 556 Query: 516 NKIGLLNVHHRVKLLYGE--GLHI-RRLEPGTEIAFYIPNQR 554 IGL NVH R+KL YGE GL I + GTE+ +P R Sbjct: 557 QSIGLKNVHQRIKLRYGEKYGLKITSKPGKGTEVRLLLPCSR 598 >UniRef50_C7PEQ2 Signal transduction histidine kinase, LytS n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PEQ2_CHIPD Length = 346 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 73/195 (37%), Positives = 108/195 (55%), Gaps = 15/195 (7%) Query: 344 LEVSRAEQ-----LREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNL 398 +E SR Q L + EL+ ++S++NPHF+FNALN+I + + NP AR I L Sbjct: 137 IERSRNSQVDKLKLESTVKELELKTIKSQLNPHFIFNALNSIRALVDENPQRARTAITEL 196 Query: 399 SRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDID-EEVNCCIPSLLI 457 S LR +++++ E ++++ EL +KDY+A+E RF ++L V YDID E + IP +++ Sbjct: 197 SNILRSSMQVEKAETVNLENELDIVKDYLALENIRFEERLRVQYDIDPETLELPIPPMML 256 Query: 458 QPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNK 517 Q LVENAI HGI G V I VRDT H I + ++ G+ Sbjct: 257 QTLVENAIKHGISRTVSGGTVIIGS---------HVRDTHHEITIENTGQIGGAATTGHG 307 Query: 518 IGLLNVHHRVKLLYG 532 GL + R+ LLYG Sbjct: 308 FGLQSTRQRLSLLYG 322 >UniRef50_A8RW55 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RW55_9CLOT Length = 584 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 81/219 (36%), Positives = 125/219 (57%), Gaps = 15/219 (6%) Query: 350 EQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNP-DTARQLIFNLSRYLRYNIEL 408 E LRE AEL+ LQ +INPHFL+N L + IR N + A +I +LS++ R + Sbjct: 369 ENLRE----AELKTLQMQINPHFLYNTLETVIWLIRSNENEKAISVITSLSKFFRIGLS- 423 Query: 409 KDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE--VNCCIPSLLIQPLVENAIV 466 + I +++EL +K+Y+ I+ R+ DK+ IDE+ ++ IP L +QPLVENAI Sbjct: 424 RGRNIITLREELEHVKEYVKIQNTRYRDKIDFSIHIDEDSMLDYPIPKLTLQPLVENAIY 483 Query: 467 HGIQPCKGKGVVTIS-VAECGNRVRIAVRDTGHGIDPKVIERVEA--NEMPGNKIGLLNV 523 HGIQ G ++I V E G+R+RI+V D G G+ P +ER++ EM + G+ N Sbjct: 484 HGIQEKPEGGAISIEIVHETGDRIRISVIDDGIGMTPAQLERLQEGLKEMAVSGFGMYNT 543 Query: 524 HHRVKLLYGEGLHIR---RLEPGTEIAFYIP-NQRTPVA 558 + R++ +G +R + GT ++F I N+R A Sbjct: 544 NQRLRNYFGRESALRIESQFGEGTNVSFSINGNKRGEKA 582 >UniRef50_UPI0001C36197 putative sensor with HAMP domain n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36197 Length = 596 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 83/222 (37%), Positives = 120/222 (54%), Gaps = 18/222 (8%) Query: 346 VSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTAR-QLIFNLSRYLRY 404 + R E + + +AE++ALQ +INPHF++N L I D A ++ LS LRY Sbjct: 350 MRRVESEQLLVKEAEIKALQQQINPHFIYNILETIMGLASEGMDDAVIEVSTCLSEMLRY 409 Query: 405 NIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVEN 463 N K+ ++KEL QIK+Y+ + + RF D+ V YD+DEE +NC I +QPL+EN Sbjct: 410 NTRFKN--VTVVEKELEQIKNYVTVIKIRFEDRFEVYYDVDEECLNCRILKFTLQPLLEN 467 Query: 464 AIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGI-DPKVIERVEANEMPGNK----- 517 AI HG+ G++ I + + N V I + D G GI + K+ E E ++ G + Sbjct: 468 AISHGLAETDSGGMLRIRIKKEENMVSIMIFDNGIGIPEEKLKELNERLKVTGERPLEFI 527 Query: 518 -----IGLLNVHHRVKLLYGEGLHIR---RLEPGTEIAFYIP 551 +G+LNVH R KL YG+ I R E GT I IP Sbjct: 528 EQYKSLGILNVHLRSKLFYGDTYSIEIFSREEKGTCIVMKIP 569 >UniRef50_C6CXK8 Signal transduction histidine kinase, LytS n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CXK8_PAESJ Length = 601 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 85/249 (34%), Positives = 134/249 (53%), Gaps = 26/249 (10%) Query: 322 AHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAIS 381 A I + EM + +TQ + ++E ++ +AE ALQS+INPHFL+N LN IS Sbjct: 357 ARDINRMMDEMEEMTRDMFNTQARLYKSELSQK---QAEFSALQSQINPHFLYNTLNCIS 413 Query: 382 S-SIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTV 440 S + Q+ ++S+ RY+I K DE + IK+E I+ YI I R+ +K + Sbjct: 414 SIGLEYGSREIAQMTSSMSKIFRYSI--KQDELVQIKEEADCIQAYIKIITIRYDNKFAM 471 Query: 441 IYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCK--GKGVVTISVAECGNRVRIAVRDTG 497 DI+E + P +++QP+VEN++ HG++ G+ VT S+ E G+ V +RDTG Sbjct: 472 KMDIEEGLLRMRTPKMILQPIVENSVYHGLERMDQGGQLEVTGSMDEQGD-VYFCIRDTG 530 Query: 498 HGIDPKVI------------ERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEP 542 G++P+ + ER + + P IGL N+H+R++LL+GE I R Sbjct: 531 KGMEPEELAALQAKLAADYPERAQDGQ-PSQSIGLTNIHNRLRLLFGESYGITIESRAGY 589 Query: 543 GTEIAFYIP 551 GT + IP Sbjct: 590 GTTVTVKIP 598 >UniRef50_Q15T86 Signal transduction histidine kinase, LytS n=9 Tax=Alteromonadales RepID=Q15T86_PSEA6 Length = 360 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 67/180 (37%), Positives = 110/180 (61%), Gaps = 9/180 (5%) Query: 355 MANKAELRALQSKINPHFLFNALNAISSSIRLNPD-TARQLIFNLSRYLRYNIELKDDEQ 413 MA++A ++ L+ ++NPHFLFN LNAIS+ I + + TA ++ LS +LRY+++ ++ Sbjct: 154 MAHQAHIKMLRYQLNPHFLFNTLNAISTLILMKDNKTAESMVTRLSDFLRYSLDKDPIKK 213 Query: 414 IDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPC 472 + +++E+ + Y+AIE+ RF D+LTVI+DI N +PSL++QPL+EN+I + I Sbjct: 214 VPLRQEIEALTLYLAIEKVRFEDRLTVIWDIQPSANEALVPSLILQPLIENSIKYAISKL 273 Query: 473 KGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEM-PGNKIGLLNVHHRVKLLY 531 + G + IS G + + V D G G D +E +M N +GL N+ R+ LY Sbjct: 274 EEGGCIAISAKVFGRDLMLEVTDNGPGAD------IEEGQMYRENGVGLQNIQERLDSLY 327 >UniRef50_C6D7S5 Cache sensor signal transduction histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7S5_PAESJ Length = 586 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 73/207 (35%), Positives = 116/207 (56%), Gaps = 9/207 (4%) Query: 353 REMANKAELRALQSKINPHFLFNALNAISSSIRLNP-DTARQLIFNLSRYLRYNIELKDD 411 +E EL ALQ++INPHFL+N LN++ + +N + +I +LS+ R ++ K Sbjct: 367 QESKRTYELEALQAQINPHFLYNTLNSVVRMVGMNKNEEVTTMITSLSKLFRISLG-KGK 425 Query: 412 EQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQ 470 I I EL ++Y+ I+Q RF +K D EV N L++QPL+ENA+VHGI+ Sbjct: 426 SIITIADELEHARNYLVIQQMRFKNKFDFSIKADGEVLNYATLKLIVQPLIENALVHGIE 485 Query: 471 PCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNK---IGLLNVHHRV 527 P KG + + + + I VRD G G+ + +++V A ++ +K +G++NV R+ Sbjct: 486 PSVDKGHIWVEAKVDCDDIVIEVRDNGLGMSEERLKQVTAGQVTSSKGSGVGVMNVQERI 545 Query: 528 KLLYGE--GLHI-RRLEPGTEIAFYIP 551 +L YG+ GLH LE GT + P Sbjct: 546 RLFYGQAYGLHFASELEEGTTVTIRFP 572 >UniRef50_C6IWB4 Histidine kinase internal region n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWB4_9BACL Length = 601 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 86/246 (34%), Positives = 141/246 (57%), Gaps = 20/246 (8%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAE-QLREMANKAELRALQSKINPHFLFNALNAISS 382 Q++ + LSQ++ E +R + +L + ++ +L+ L S+INPHFLFN L +I Sbjct: 350 QLSQRFNALVGRLSQLMKEMDEANRQKRKLEQRQSEIKLKMLASQINPHFLFNTLESIRM 409 Query: 383 SIRLNPDTA-RQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVI 441 L + I+ LS +R +E+ D+ +I + +EL +K Y+ +++ R+ D+L Sbjct: 410 EAHLRGEEEIAHAIWQLSALIRNGLEV-DNGKISLSRELDMVKCYLELQKFRYEDRLNYK 468 Query: 442 YDID---EEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTI---SVAECGNRVRIAVRD 495 +++ EE+ IP L+IQPLVEN+I+HG++ K +G TI + + RV + + D Sbjct: 469 LEVEPGIEEIE--IPPLIIQPLVENSILHGLEQ-KEEGATTILIRAYFDDNGRVCVNIFD 525 Query: 496 TGHGIDPKVIERV-----EANEMPGNKIGLLNVHHRVKLLYGE--GLHIRRLE-PGTEIA 547 G GI PK ++ + E E G +IGL NVH R+KL+YG+ GL I E GT+I+ Sbjct: 526 DGAGIAPKRLQELNRMLNEPEEEAGQRIGLRNVHDRLKLIYGDGAGLTIGSQEGEGTQIS 585 Query: 548 FYIPNQ 553 F IP + Sbjct: 586 FCIPKE 591 >UniRef50_Q0QJA2 Putative histidine kinase n=1 Tax=Pseudoalteromonas sp. BB1 RepID=Q0QJA2_9GAMM Length = 328 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 73/201 (36%), Positives = 116/201 (57%), Gaps = 14/201 (6%) Query: 345 EVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI-RLNPDTARQLIFNLSRYLR 403 + +A + +A +++L+ L+ ++NPHF+FN++NAI + I + A ++ L LR Sbjct: 120 QTQKAAEATHLAKESQLKMLRYQLNPHFMFNSINAICTLILKKESLQAVTMLEKLCDLLR 179 Query: 404 YNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVE 462 +++ E++ IK+E+ ++ Y+ IEQ RF DKL V ++ ++ N IPSLLIQPLVE Sbjct: 180 HSLYTDPLEKVAIKEEIAMLRTYLDIEQCRFADKLEVNINVAQQCNDLLIPSLLIQPLVE 239 Query: 463 NAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLN 522 NA+ HG++ K V+TIS+ + + I V DTG G D N+ IGL N Sbjct: 240 NALKHGMRA-DQKMVITISIEKTKTALLINVADTGKGFDD--------NKKTKTGIGLAN 290 Query: 523 VHHRVKLLYGEGLHIRRLEPG 543 R+KL+YG R+E G Sbjct: 291 CEQRLKLIYGNS---HRIEKG 308 >UniRef50_Q893H6 Two-component sensor kinase yesM n=1 Tax=Clostridium tetani RepID=Q893H6_CLOTE Length = 577 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 73/215 (33%), Positives = 121/215 (56%), Gaps = 11/215 (5%) Query: 346 VSRAEQLREMANKAELRALQSKINPHFLFNALNAIS-SSIRLNPDTARQLIFNLSRYLRY 404 +++ Q+ + AELR LQS+INPHFL+N L+ I ++ N +I LS + R Sbjct: 355 INKVYQVEKQKRSAELRVLQSQINPHFLYNTLDTIQWKALEYNAFEVVDMINYLSNFFR- 413 Query: 405 NIELKD-DEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVE 462 I L D E I I E+ + +Y+ I++ R+ DK++ D+D ++ IP L++QPLVE Sbjct: 414 -ISLSDGKEFITISDEVAHVSNYLEIQKIRYKDKISYSMDVDSSLDQYLIPKLIVQPLVE 472 Query: 463 NAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN---EMPGNKIG 519 N+I HG++ K KG++ +S++ + I V D G G+D + + + N + N G Sbjct: 473 NSIYHGLKLQKHKGIINVSISSKDGFLFIKVIDNGLGMDVEQLRTLRKNLWESIETNHYG 532 Query: 520 LLNVHHRVKLLYGEGLHIR---RLEPGTEIAFYIP 551 L N++ R+KL +G+ I L+ GT++ IP Sbjct: 533 LYNINERLKLAFGKKYSIEIKSELKIGTQVLLRIP 567 >UniRef50_B8G1V5 Sensor protein n=2 Tax=Desulfitobacterium hafniense RepID=B8G1V5_DESHD Length = 1018 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 74/197 (37%), Positives = 111/197 (56%), Gaps = 3/197 (1%) Query: 358 KAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQ-IDI 416 K E LQ++I PHFLFNALN I S NP A +L+ L +LR + + + + Sbjct: 819 KKETAFLQAQIRPHFLFNALNTIYSFCYTNPGKAGELLAELGVFLRSSFDFSSTASLVTV 878 Query: 417 KKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGK 475 +KEL +K Y+AIE+ARFG +L V Y ++ V N I L+IQP+VEN+I HG+ Sbjct: 879 EKELRLVKAYVAIEEARFGSQLEVEYAVEPSVLNFSILPLMIQPIVENSIRHGLLKRSQG 938 Query: 476 GVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGL 535 G V++S+ + +++ V D G GI V++ + + +GL N+ R+ YG L Sbjct: 939 GKVSLSLTHSEDCIQVEVIDNGVGIPASVLKDLIHAKSETRGVGLTNISRRLLRFYGTTL 998 Query: 536 HIRRLEP-GTEIAFYIP 551 I +E GT ++F IP Sbjct: 999 TIFSVEDHGTTVSFRIP 1015 >UniRef50_Q2SQ68 Predicted signal transduction protein with a C-terminal ATPase domain n=2 Tax=Bacteria RepID=Q2SQ68_HAHCH Length = 369 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 66/190 (34%), Positives = 111/190 (58%), Gaps = 15/190 (7%) Query: 350 EQLREMANKAEL----RALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYN 405 + L + K+EL +ALQ++I PHFLFN++N+I+ I +NP+ A + + +L+ R Sbjct: 164 QHLWHLQQKSELESRVQALQARIRPHFLFNSMNSIAGLIPINPNEAEEAVLDLAELFR-- 221 Query: 406 IELKDDEQI-DIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCC-IPSLLIQPLVEN 463 LK+ + +K+EL + Y+ IEQ R GD+LTV +D+ + +P L IQPLVEN Sbjct: 222 AALKESSSLAPLKEELALCERYLRIEQLRLGDRLTVKWDMRNISDAARVPPLSIQPLVEN 281 Query: 464 AIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNV 523 A+ HG+QP G++TI+ E G+ + + + + H DP + GN+I + N+ Sbjct: 282 AVYHGVQPSAEGGLITITAYEQGSWLYVLISNPVHNGDPSQGHK-------GNRIAMQNI 334 Query: 524 HHRVKLLYGE 533 R++ +G+ Sbjct: 335 RSRLQAFFGD 344 >UniRef50_UPI0001BC574D histidine kinase internal region n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC574D Length = 565 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 63/185 (34%), Positives = 115/185 (62%), Gaps = 8/185 (4%) Query: 360 ELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKE 419 E++ L+S+ NPHFLFN L + +I+ + A ++I N+S LR++IE K E + +++E Sbjct: 362 EIKQLESQFNPHFLFNTLEMLKYTIKTDTSMANKIILNISSLLRFSIENKSSE-VTLERE 420 Query: 420 LYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVV 478 L ++Y+ I++ RFG+ D+D+E N +P L++QP++EN+I HG K ++ Sbjct: 421 LQYAENYLDIQRFRFGENFDYHIDVDKETRNFLVPKLVLQPIIENSIKHGYTQI-NKLMI 479 Query: 479 TISVAECGNRVRIAVRDTGHGIDPKVI----ERVEANEMP-GNKIGLLNVHHRVKLLYGE 533 I + +++ I + D G+GI+ + + +R++ E+ GN IG+ NVH R++L+YG+ Sbjct: 480 LIKTKKQKDKLVITIYDNGNGIEKEKLHELRKRLKDRELNIGNHIGIYNVHRRIQLIYGD 539 Query: 534 GLHIR 538 I+ Sbjct: 540 NYGIK 544 >UniRef50_C6J594 Histidine kinase internal region n=2 Tax=Bacillales RepID=C6J594_9BACL Length = 586 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 83/246 (33%), Positives = 131/246 (53%), Gaps = 19/246 (7%) Query: 326 TSSLQEMAVGLSQIISTQLEVSRAEQLREM-ANKAELRALQSKINPHFLFNALNAISSSI 384 T + E+ +Q++ E+ R +E+ ++ EL+ALQ++INPHFLFN L A S+ Sbjct: 335 TMEINELNNSYNQMVDNMNELIRVVYEKELLQSRTELKALQAQINPHFLFNTLEAFYWSL 394 Query: 385 R-LNPDTARQLIFNLSRYLRYNIELKD-DEQIDIKKELYQIKDYIAIEQARFGDKLTVIY 442 + L+ +S RY I + DE + I+ EL ++ Y+ + R ++LT Sbjct: 395 EDKGEEELANLVVGMSNLFRYIISSPNQDEWVTIEDELEHVERYLQLMTIRLAERLTWSI 454 Query: 443 DIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNR--VRIAVRDTGHGI 500 D E + IP LLIQPLVENAI+HG++ G+G V++ V V+I VRD G G+ Sbjct: 455 DAGEFRHVKIPKLLIQPLVENAILHGVEKQLGQGKVSVCVESSDKEGYVKITVRDNGPGM 514 Query: 501 DPKVIER-VEANE------MPGNKIGLLNVHHRVKLLYGE------GLHI-RRLEPGTEI 546 D + + ++A E G +G++NV R++L Y E GL + R GT + Sbjct: 515 DEETLNGLLQAMEGGPSISSKGTGVGIVNVQRRLRLYYDEEQGKKHGLQVTSRPGEGTSV 574 Query: 547 AFYIPN 552 +F IP+ Sbjct: 575 SFEIPS 580 >UniRef50_A8FI26 Sensor histidine kinase n=2 Tax=Bacillus pumilus RepID=A8FI26_BACP2 Length = 424 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 82/247 (33%), Positives = 133/247 (53%), Gaps = 19/247 (7%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 + + Q M + +I E+ + L + +L+ LQ+++NPHFLFN LN +S Sbjct: 180 LNEAFQRMRQEMKMMIE---EMKQKAALDQKIKDMKLKTLQNQMNPHFLFNTLNIVSRMA 236 Query: 385 RL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 L + D +LI ++S +RY++ + +++E+ +K+Y I++ RF D++T Sbjct: 237 YLESADATSRLIQSVSTLMRYSLSALS-ASVTLEQEVKVVKEYFHIQETRFADRITCKTT 295 Query: 444 IDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 IDE ++ IPSL +QPLVENA +HG++P + G+V +S+ + G V I +RD G GI+ Sbjct: 296 IDESCLSVLIPSLTLQPLVENAFIHGVEPKEEDGLVELSIYQEGGYVMIRIRDNGVGINE 355 Query: 503 KVIERV--EANEMPGN--------KIGLLNVHHRVKLLYG--EGLHI-RRLEPGTEIAFY 549 + R+ E +E N IGL NV R++L YG L I + GT I Sbjct: 356 QERRRLLSEKDEEDPNILSKGHSTGIGLRNVISRLRLFYGVQNALQIDSKPNEGTTIQLA 415 Query: 550 IPNQRTP 556 IP + P Sbjct: 416 IPMKEGP 422 >UniRef50_Q025Z8 Signal transduction histidine kinase, LytS n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q025Z8_SOLUE Length = 436 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 70/170 (41%), Positives = 104/170 (61%), Gaps = 11/170 (6%) Query: 366 SKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQID-IKKELYQIK 424 S+INPHFLFN LN++SS IR +P+ AR ++ LS+ LR L+ E ++ EL I+ Sbjct: 245 SQINPHFLFNTLNSVSSLIRTDPNQARVMVVRLSKVLRR--LLRQHEHFSPLRDELSFIE 302 Query: 425 DYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVA 483 DY+AIE RFG+KL D+ E+ ++ +PS+L+QPLVEN+I HG+ G + I Sbjct: 303 DYLAIEVVRFGEKLRFERDVAEDTLDMLVPSMLLQPLVENSIKHGLSTKVEGGTIRIRTY 362 Query: 484 ECGNRVRIAVRDTGHGI-DPKVIERVEANEMPGNKIGLLNVHHRVKLLYG 532 NR+ + V D G GI D K+ ++ IG+ NVH R+++L+G Sbjct: 363 RTENRLHLMVEDDGVGIPDEKLATLLD------RGIGVNNVHERLRVLFG 406 >UniRef50_UPI00017896B4 signal transduction histidine kinase, LytS n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017896B4 Length = 566 Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 68/214 (31%), Positives = 126/214 (58%), Gaps = 11/214 (5%) Query: 346 VSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYN 405 + + ++L E+ E++ LQS+ +PHF+FN L + +I+++ + A++++ LSR LRY+ Sbjct: 348 IEKNKELSELRTIIEVKQLQSQFHPHFIFNVLETLRYAIKIDANQAQEIVLILSRLLRYS 407 Query: 406 IELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENA 464 I D + +K ++ ++DY+ ++Q RF D+L + EE ++ +P LL+QP++ENA Sbjct: 408 I--GHDRSVQLKNDMNYVQDYLKLQQIRFNDRLDYRITVAEETLDVYVPKLLLQPIIENA 465 Query: 465 IVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV----EANEMPGNKIGL 520 I +G + + ++ I++ ++ + VRD G G+ + ++ V ++ IGL Sbjct: 466 IKYGYE-NQSDVLIEINIHTSAGKLILEVRDNGQGMSKERLQEVNRILQSQTNTTQHIGL 524 Query: 521 LNVHHRVKLLYGE--GLHIRRLE-PGTEIAFYIP 551 NVH R+ LLYGE G+HI + GT + IP Sbjct: 525 YNVHRRLVLLYGEASGIHIDSNQGKGTCVVLTIP 558 >UniRef50_C3WDI8 Two-component sensor histidine kinase n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WDI8_FUSMR Length = 579 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 75/203 (36%), Positives = 123/203 (60%), Gaps = 13/203 (6%) Query: 359 AELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKK 418 E++ L+S+ NPHFLFN L + +I L+ A ++I N++ LR++IE K E + I++ Sbjct: 364 TEIKQLESQFNPHFLFNTLEMLRYTIHLDKKMANKIIINMASILRFSIENKSSE-VKIER 422 Query: 419 ELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHG-IQPCKGKG 476 E++ IK+Y+ I++ RFGDK + D++E + P L+IQP+VEN+I HG IQ + K Sbjct: 423 EIFYIKNYLEIQKIRFGDKFSYSIDVEERFLEYLTPKLIIQPIVENSIKHGYIQEKEFK- 481 Query: 477 VVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGN-----KIGLLNVHHRVKLLY 531 + I + + R++I + D G GI+ + ++ ++ + N IG+ NV R++LLY Sbjct: 482 -ILIKIKQKRERIQIGIFDNGKGIEKQELKLLKEKLLKRNLSLKEHIGMYNVQRRIELLY 540 Query: 532 GE--GLHIRRLEP-GTEIAFYIP 551 G+ GL+IR GT I IP Sbjct: 541 GKEYGLNIRSSSNRGTYIGIEIP 563 >UniRef50_A8RF93 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RF93_9FIRM Length = 551 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 71/214 (33%), Positives = 123/214 (57%), Gaps = 14/214 (6%) Query: 323 HQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISS 382 HQ+ + E+ + +++ T E +E + + + LQ++INPHFLFN LN + Sbjct: 324 HQVAVNFNELLDRIEELVKT------VESEQEQKRETQFQLLQAQINPHFLFNTLNTLHF 377 Query: 383 SIRLNPDT-ARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVI 441 +N D + I L++ LR I + DE + + +E+ +K+YI I++ R+GD + Sbjct: 378 LALMNDDKPVGEGISALAKLLRNTITDQKDE-VSVAEEIENLKNYIIIQKLRYGDLFETV 436 Query: 442 YDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGI 500 Y+IDEEV +C I L+QP+VEN+I+H + + ++TI + + ++I++ D G G Sbjct: 437 YNIDEEVKDCKILKFLLQPIVENSILHAFEEDREHQLLTIRAQKYHHYLKISIGDNGKGF 496 Query: 501 DPKVIERVEANE-MPGNKIGLLNVHHRVKLLYGE 533 PK ER +N + G IG+ N+ R++L+YGE Sbjct: 497 KPK--ERKNSNRNLSG--IGIDNISERIRLMYGE 526 >UniRef50_Q9KB25 BH2110 protein n=2 Tax=Bacillus RepID=Q9KB25_BACHD Length = 585 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 82/250 (32%), Positives = 141/250 (56%), Gaps = 19/250 (7%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAE----QLREMANKAELRALQSKINPHFLFNALNA 379 ++T+ +M+ ++++I+ ++ S E QLRE +A+L ALQS+INPHFLFNAL Sbjct: 341 ELTNEFNKMSQTINRLIN-EVYASNIEKKDLQLRE--KQAQLSALQSQINPHFLFNALET 397 Query: 380 IS--SSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDK 437 I S I+ +TA+ +I N+++ R ++ D + ++ EL I ++ I++ RFGDK Sbjct: 398 IRMRSMIKGEKETAK-IIQNMAKIFRNSLTWGKD-WVTVRDELCLIICFLEIQKYRFGDK 455 Query: 438 LTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 + DIDEE + IP+++ P VENA +HGI+ K KG++ I V + + + D Sbjct: 456 MEYELDIDEEAYDYIIPNMVFLPFVENASIHGIESVKEKGIIQIRVEKNDGEIVYEISDN 515 Query: 497 GHGIDPK----VIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFY 549 G G+D + +IE ++ E G +G+ NV++R+KL Y R GT + Sbjct: 516 GAGMDEEKLASLIETLKNEENMGENVGIKNVYYRLKLHYKNHFDFSINSRPGQGTTVQIK 575 Query: 550 IPNQRTPVAS 559 +P ++ ++ Sbjct: 576 LPAEKNNISK 585 >UniRef50_C6IXM7 Histidine kinase internal region n=2 Tax=Paenibacillus RepID=C6IXM7_9BACL Length = 609 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 80/202 (39%), Positives = 123/202 (60%), Gaps = 14/202 (6%) Query: 361 LRALQSKINPHFLFNALNAISS-SIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKE 419 L+AL+++INPHFL+NAL AIS+ +++ D ++ L+ LRY I KD ++ ++E Sbjct: 404 LKALEAEINPHFLYNALQAISTKALKSGDDEVADMVDALALTLRYCISGKD--IVNAREE 461 Query: 420 LYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVV 478 L I+ Y+A+++ARFG +L V + +E + IP L IQ LVEN+I HG++ G+ Sbjct: 462 LKHIERYLALQKARFGSRLQVTVEWEEALKELQIPKLSIQSLVENSIKHGLEKM-SSGIS 520 Query: 479 TISVAECGN-RVRIAVRDTGHGIDPKVIERVEAN------EMPGNKIGLLNVHHRVKLLY 531 AE G+ I+V D G GI P+ +E+++A+ E G IGL N++ R+KLLY Sbjct: 521 IRIRAELGDTHAVISVSDNGPGISPEQMEQIQASFLQDWEEQEGENIGLKNLYTRLKLLY 580 Query: 532 GE--GLHIRRLEPGTEIAFYIP 551 G+ L I+ E GTE+ IP Sbjct: 581 GKEAELRIQSDEHGTEMCMLIP 602 >UniRef50_C6W212 Signal transduction histidine kinase, LytS n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W212_DYAFD Length = 482 Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 65/195 (33%), Positives = 110/195 (56%), Gaps = 14/195 (7%) Query: 352 LREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDD 411 L ++ +AEL ALQ++INPHFL+N+LN+I+S + NPD A ++ LS+ RY K Sbjct: 273 LEKLKTRAELDALQARINPHFLYNSLNSIASLVHENPDKAEEMTLLLSKLFRYTTGRKTS 332 Query: 412 EQID-IKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV--NCCIPSLLIQPLVENAIVHG 468 + D I+ EL ++ Y+ +E+ RFG++L ++++E +P ++QP+VENAI HG Sbjct: 333 DYFDSIENELEMVETYLQVEKVRFGERLRFTVEVEDETLKALQVPKFILQPIVENAIKHG 392 Query: 469 IQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVK 528 I +G + + + E + + V D G P+ + G G+ ++ ++K Sbjct: 393 ISRMAEQGNIVVKIYEKDQWLHLCVHDNGPAF-PETL---------GAGYGMRSIQDKLK 442 Query: 529 LLYGEGLHIRRL-EP 542 LLYG+ + L EP Sbjct: 443 LLYGDNARLELLNEP 457 >UniRef50_B0K3C6 Histidine kinase n=4 Tax=Thermoanaerobacter RepID=B0K3C6_THEPX Length = 414 Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 77/232 (33%), Positives = 134/232 (57%), Gaps = 14/232 (6%) Query: 332 MAVGLSQIISTQL--EVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLN-- 387 + +GL++++ +L E R + + EL+ LQS++NPHFLFN LN + L Sbjct: 168 IELGLNKLMQEKLLEETKRRSEYENIIKSLELKTLQSQVNPHFLFNTLNTAARLAYLENA 227 Query: 388 PDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE 447 P TA ++I++L+ LRY++ D+ + +K+E+ +K Y+ I++ R+ D + D+ E Sbjct: 228 PRTA-EIIYSLASLLRYSLR-NLDQLVALKEEISYLKHYLHIQEIRYKDHIKSQIDVPTE 285 Query: 448 V-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIE 506 + N +P + +QP+VENAI+HG++ + GV+ I + + I V+D G GID K++E Sbjct: 286 IENVLLPVMSLQPIVENAIIHGLEEKEEGGVINIKAYQKDETIFIEVKDNGVGIDKKMLE 345 Query: 507 RVEANEMPGN----KIGLLNVHHRVKLLYGE--GLHIRRLE-PGTEIAFYIP 551 ++ + G +GL NV R+K+ +G+ GL IR + GT + IP Sbjct: 346 VIKNDIEKGKGHTTALGLQNVDRRIKMYFGKEYGLEIRSEKGNGTLVVLKIP 397 >UniRef50_A0Y100 Regulator of cell autolysis (HATPase) n=1 Tax=Alteromonadales bacterium TW-7 RepID=A0Y100_9GAMM Length = 346 Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 68/184 (36%), Positives = 108/184 (58%), Gaps = 8/184 (4%) Query: 348 RAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIE 407 R + +A+L L+ ++NPHF+FN+LN IS+ I PD A +++ L+ LRY+++ Sbjct: 149 RVTAEKHALKQAQLATLRYQLNPHFMFNSLNTISAYIHTKPDLADEVLHELADILRYSLD 208 Query: 408 LKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIV 466 + +QI +++EL I+ Y+ IE+ARFGDKL V Y I + N +P LLIQP++ENAI Sbjct: 209 TAEQQQIPLQQELTIIEKYLNIEKARFGDKLKVNYHIPNTLKNKTLPPLLIQPIIENAIK 268 Query: 467 HGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHR 526 H + + + I+++E N V+I + D G G V++ G IG+ N+ R Sbjct: 269 HNAK--QTSLTLNITLSELSNGVKIVISDNGKGFTDDVLKCGY-----GKGIGMKNIMLR 321 Query: 527 VKLL 530 V L Sbjct: 322 VNQL 325 >UniRef50_C6JHI9 Two-component sensor kinase yesM n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JHI9_9FIRM Length = 534 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 82/251 (32%), Positives = 136/251 (54%), Gaps = 22/251 (8%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAIS-SS 383 I +M+ L +I+T +V A++ +A+L+ LQS++NPHFLFN L IS + Sbjct: 286 INHGFNKMSKKLDMLINTVYKVQLAQK------EAQLKNLQSQMNPHFLFNTLQLISWKA 339 Query: 384 IRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 +I +LS L+ ++ +++ ++ E+ IK Y I + ++ +K+ + Sbjct: 340 YEYEAYPVCDMISSLSYMLQTDLYSNENKVYTLRDEMEYIKQYTLIIRCKYNNKIAIHTS 399 Query: 444 IDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 I E + +C IP L+IQP +EN+I HG+ P GVV+ISV +C + + D G GID Sbjct: 400 IPEHLLDCIIPKLIIQPFLENSINHGLAPKPTPGVVSISVEQCDQDLLCIIEDDGVGIDN 459 Query: 503 KVIERVEANEMP----------GNKIGLLNVHHRVKLLYGE--GLHI-RRLEPGTEIAFY 549 KV++ + + + P G+ I L N+ R++LLYG+ G I +L GT + Sbjct: 460 KVLQNIRSLDSPATSIDNPNKNGHHIALSNIKTRLELLYGKNYGFTITSQLSFGTRVELR 519 Query: 550 IPNQRTPVASQ 560 IP Q T +AS+ Sbjct: 520 IPYQ-TSIASK 529 >UniRef50_Q2S5X6 Histidine kinase family n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S5X6_SALRD Length = 325 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 70/202 (34%), Positives = 111/202 (54%), Gaps = 10/202 (4%) Query: 350 EQLREMAN---KAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNI 406 ++LRE +A L AL+++INPHFLFNA N+I++ +R P A ++ +LS RY + Sbjct: 95 QRLREAEAARYEARLSALRAQINPHFLFNAFNSIAALVRTRPGEAEAVVEDLSDLFRYAL 154 Query: 407 EL-KDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENA 464 KD + EL Y+++E+AR+ +LTV + E++ IPS+ +QPLVENA Sbjct: 155 RASKDGGTATLGDELEAACRYLSVEKARYRGRLTVEICVPEQLQPLPIPSMTLQPLVENA 214 Query: 465 IVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVH 524 + HG+ +G V+++ + + V DTG G D + + G GL NV Sbjct: 215 VQHGVGETQGDCTVSVTAERADGTLLLRVLDTGPGFDS-----TDLGDALGEGSGLANVR 269 Query: 525 HRVKLLYGEGLHIRRLEPGTEI 546 R++L +GE +R L G E+ Sbjct: 270 ERLELFFGEAAQMRLLPQGIEL 291 >UniRef50_B8I0Y1 Putative sensor with HAMP domain n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I0Y1_CLOCE Length = 600 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 73/209 (34%), Positives = 116/209 (55%), Gaps = 11/209 (5%) Query: 358 KAELRALQSKINPHFLFNALNAISSSIRLNPD-TARQLIFNLSRYLRYNIELKDDEQIDI 416 + E + LQS++NPHFLFN L I +L+ D T +++ +L+ L+ I +I I Sbjct: 387 ETEFKFLQSQMNPHFLFNTLITIGYKAKLSKDETVYKMVTSLTELLQAGIYSNSQAKIPI 446 Query: 417 KKELYQIKDYIAIEQARFGDKLTV-IYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKG 474 ++EL I Y+ +++ RFGDKL IY DE + N +P L I+PL+ENA+VHG++ G Sbjct: 447 RQELEFIDFYLYLQKMRFGDKLEYKIYVSDESILNFVLPKLSIEPLIENAVVHGLEEKVG 506 Query: 475 KGVVTISVAECGNRVRIAVRDTGHGIDPKVI-----ERVEANEMPGNKIGLLNVHHRVKL 529 KG + +++ + V D G G I + + + N IGL+N H R+KL Sbjct: 507 KGTIELNIRRENESIFFVVTDDGAGFKTDKINLDDNDTINMRKKGHNSIGLMNTHKRIKL 566 Query: 530 LYGE--GLHIR-RLEPGTEIAFYIPNQRT 555 +YG+ G+ I R G ++ +IP R+ Sbjct: 567 MYGDPYGVQIESRTNIGAKVTVHIPVDRS 595 >UniRef50_C5EE53 Histidine kinase internal region n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EE53_9FIRM Length = 599 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 85/233 (36%), Positives = 128/233 (54%), Gaps = 20/233 (8%) Query: 338 QIISTQLE--VSRAEQL-------REMANKAELRALQSKINPHFLFNALNAISSSIRLNP 388 QI+S ++ +SR QL +E +AEL +Q +INPHFL+N L ++ L+ Sbjct: 366 QILSDKINELLSRVRQLIEQVKEEQEKKREAELSLMQEQINPHFLYNTLYSVQQLCELDE 425 Query: 389 DT-ARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE 447 A ++ LS + R + +D I I E+ +K+Y+ I+ ++GDK +I + Sbjct: 426 SKEASAMVLALSNFFRTGLSRGED-VITIDTEINHVKNYLVIQHMKYGDKFEYEIEIAPD 484 Query: 448 V-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIE 506 + +C I L +QPLVENA+ HGIQ GKG++TI+ G R+ VRDTG G+ + +E Sbjct: 485 IRDCRILKLTLQPLVENALHHGIQNQAGKGMITITGKREGGRILFEVRDTGAGMASERLE 544 Query: 507 RVEA--NEMPGN---KIGLLNVHHRVKLLY-GE-GLHIRRLE-PGTEIAFYIP 551 +V N+ G GL NV+ R+ L Y GE GL I ++ GT I YIP Sbjct: 545 QVRKSMNQEEGYSQVSFGLRNVYSRLMLYYDGEAGLEIESVQGRGTVIKVYIP 597 >UniRef50_A4XJ72 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XJ72_CALS8 Length = 583 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 81/239 (33%), Positives = 136/239 (56%), Gaps = 11/239 (4%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELR--ALQSKINPHFLFNALNAIS 381 Q+T +++ MA + +I Q+ ++ ++ + +A + E++ L S+INPHFLFN L AI Sbjct: 347 QLTENIKTMAKNIKNLID-QVYLAEVQKQQIIAKQREIQFEMLCSQINPHFLFNTLEAIR 405 Query: 382 -SSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTV 440 + Q+++ LS LR +IE+ D I ++KE+ +K+++ I++ RFGDK+ Sbjct: 406 MKAFCTGQYEIAQVVYLLSNLLRKSIEMTID-LITLEKEVEIVKEFLEIQKFRFGDKIYY 464 Query: 441 IYDI-DEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHG 499 ++ D+ ++ + +IQPLVEN+I HGI+P GKG + I V + ++I V D G G Sbjct: 465 KIEVQDDLLSSKVLPFIIQPLVENSIRHGIEPIIGKGTIEIKVFKKDGTIKIIVTDNGAG 524 Query: 500 IDPKVIERV--EANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQ 553 + + +E V + + +GL NV HR+KL YGE I L GT + IP + Sbjct: 525 MPKEKLEEVLQSLDSKDKSHVGLKNVFHRLKLFYGEEAKIFINSELGKGTSVEIQIPKR 583 >UniRef50_B1S7C3 Putative uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S7C3_9BIFI Length = 378 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 85/253 (33%), Positives = 130/253 (51%), Gaps = 26/253 (10%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQ---------SKINPHFLF 374 + S+L MAV + + SR+ + +AN EL+ALQ S+INPHF+ Sbjct: 126 SLVSNLFNMAVSVLLGLCISWYKSRSHFGQLLANDKELKALQHAARVQIMVSQINPHFVC 185 Query: 375 NALNAISSSIRLNPDTARQLIFNLSRYLRYNIE-LKDDEQIDIKKELYQIKDYIAIEQAR 433 N L I + + D A++ + S Y+R N + + E + EL +K Y+++EQ R Sbjct: 186 NVLATIQAMCDTDVDKAKEALGLFSAYMRDNTDAVARTEPVPFAMELQHVKRYVSLEQMR 245 Query: 434 FGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAV 493 FGDKL V+YDID + +P+L +QP++ENAI HGI + G V +S E VRI + Sbjct: 246 FGDKLAVMYDIDT-TDFRLPALTVQPIIENAIKHGIGKKENGGFVRLSARERQGVVRIEI 304 Query: 494 RDTGHGIDPKVI-----------ERVEANEMPG-NKIGLLNVHHRVKLLYGEGLHIRRLE 541 D G G+D + + E V+ E G + +GL NV R++L+ L + + Sbjct: 305 ADNGVGMDERTLYGLTGSILQTAESVDRPEGDGRSHVGLTNVRERLRLMSHGTLAVSS-Q 363 Query: 542 P--GTEIAFYIPN 552 P GT + IP Sbjct: 364 PGRGTTVIISIPK 376 >UniRef50_Q2RGN3 Histidine kinase n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RGN3_MOOTA Length = 607 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 62/197 (31%), Positives = 120/197 (60%), Gaps = 13/197 (6%) Query: 346 VSRAEQLREMANKAELRALQSKINPHFLFNALNAISS-SIRLNPDTARQLIFNLSRYLRY 404 + R QL + AEL+ALQS++NPHFLFN+LN ++ ++ +++ L+R +RY Sbjct: 388 LKRQHQLEQALKDAELKALQSQVNPHFLFNSLNTVARLALLEGAANTEKMVRALARLMRY 447 Query: 405 NIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVEN 463 ++ + + + +E+ ++DY+ I++ RF D++ ++E + +P +++QPLVEN Sbjct: 448 SL-YQVKGTVSLAEEIAAVRDYLFIQETRFSDRVRSRVKVEEAAMQARLPCMVLQPLVEN 506 Query: 464 AIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKV--------IERVEANEMPG 515 AI+HG++P + G +T+S G++VR+ ++D G GI P+V + R ++ G Sbjct: 507 AIIHGLEPKEEGGEITVSARLVGDQVRVEIKDDGVGIPPEVKKAIFDLEVRRSGKGQVSG 566 Query: 516 NKIGLLNVHHRVKLLYG 532 +G++NV+ R++ +G Sbjct: 567 --LGIVNVYRRLQHHFG 581 >UniRef50_C6J069 Signal transduction histidine kinase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J069_9BACL Length = 479 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 75/208 (36%), Positives = 123/208 (59%), Gaps = 17/208 (8%) Query: 360 ELRALQSKINPHFLFNALNAISSSIRLNPDT-ARQLIFNLSRYLRYNIELKDDEQIDIKK 418 EL+ LQS+INPHFLFN LN+IS L T L ++SR LRYN++ K D+ + +++ Sbjct: 267 ELKTLQSQINPHFLFNTLNSISKLAYLEGATKTSDLAVSVSRLLRYNLQ-KLDQAVPLRE 325 Query: 419 ELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGV 477 E+ + DY+ I++ARF D++ +IDE ++ +P L +QP++ENA VHGI+ + V Sbjct: 326 EVAHVTDYMNIQKARFRDRIAFRMNIDERALDGRVPCLTLQPILENAFVHGIEQMEEGAV 385 Query: 478 VTISVA-ECGNRVRIAVRDTGHGIDPKVIERV------EANEMPGNK----IGLLNVHHR 526 + +++ G+RV I +RD G G+ + ++R+ +A +M G + +G NV R Sbjct: 386 LELAIRLGEGDRVEIEIRDNGVGMSRETVDRLLQSVRGDAPQMGGKRHSTGLGTHNVFKR 445 Query: 527 VKLLYG--EGLHIRRLE-PGTEIAFYIP 551 + L + E + I E GT + F +P Sbjct: 446 LHLFFDGEEQIEIDSEEGAGTAVRFTLP 473 >UniRef50_A6TUQ5 Signal transduction histidine kinase, LytS n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TUQ5_ALKMQ Length = 572 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 75/205 (36%), Positives = 111/205 (54%), Gaps = 4/205 (1%) Query: 349 AEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIEL 408 A + A E+ LQ++INPHFL N L+ I + I+ +P+ AR+LI NL YLR + Sbjct: 351 ASSAMDKAETNEISFLQAQINPHFLNNTLSVIGAMIKRDPEGARELIGNLGEYLRNSCYF 410 Query: 409 KDDE-QIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVH 467 + +++EL + Y+AIE+ RFG++L IP L++QPLVENAI H Sbjct: 411 DHTSPMVLLEEELEAVNTYVAIEKTRFGNRLNFHIVCSHLPKFHIPRLILQPLVENAIRH 470 Query: 468 GIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRV 527 I G V +++ N++ V+D G GI + + R+ A E G IG+ N+H R+ Sbjct: 471 SILRKADGGNVWLTITRRANKIFFEVKDDGVGIAEEKLLRLTAKEDQG--IGITNIHKRL 528 Query: 528 KLLYGEGLHIR-RLEPGTEIAFYIP 551 Y +GL I R GT + F IP Sbjct: 529 IKYYKKGLKIESRKGEGTSVKFSIP 553 >UniRef50_A6LVF8 Sensor protein n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LVF8_CLOB8 Length = 1032 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 77/214 (35%), Positives = 125/214 (58%), Gaps = 10/214 (4%) Query: 347 SRAEQLREM------ANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSR 400 +R L++M A K E LQS+I PHFL+N L+ I S + A +L+ LS+ Sbjct: 815 ARVTTLQKMRIAVKEALKMETVFLQSQIRPHFLYNTLSVIVSLCYRDGKKAGELLGELSK 874 Query: 401 YLRYNIELKD-DEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQ 458 YLR+ ++ + I +K+E+ ++ Y+ +E+ARFG++L +DIDEE + IP+L+IQ Sbjct: 875 YLRFAFDIDPYNSFISLKEEMSFVRSYVKLEKARFGERLEFEFDIDEECLQNTIPALVIQ 934 Query: 459 PLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKI 518 PLVEN+I HG+ G+V IS+ + + ++I ++D G GID + + + + N Sbjct: 935 PLVENSIRHGLVKRISGGIVKISIKKSNDYIKIVIQDDGIGIDADKLNGLLDDSVSINS- 993 Query: 519 GLLNVHHRVKLLYGEGLHIR-RLEPGTEIAFYIP 551 GL NV+ R+ YG+G+ I ++ GT IP Sbjct: 994 GLKNVNKRLINEYGQGIIIESKIGQGTTSTINIP 1027 >UniRef50_C5ENI0 Histidine kinase internal region n=3 Tax=Clostridiales RepID=C5ENI0_9FIRM Length = 564 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 74/226 (32%), Positives = 127/226 (56%), Gaps = 12/226 (5%) Query: 340 ISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLS 399 + TQ+E +R ++ E+ ++ + L+S+ NPHFL+N L I +L P TA +++F+LS Sbjct: 343 LKTQMENNR--KMTELVAMSQNKQLESQFNPHFLYNTLENIRYMCKLEPATAERMVFSLS 400 Query: 400 RYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDID-EEVNCCIPSLLIQ 458 LRY+++ D Q+ +K++L +++Y+ I + RFG +L +++ E ++C IP L++Q Sbjct: 401 NLLRYSLDGSKD-QVTLKEDLEHLENYLTILKRRFGSRLEYQIEVEPEAMDCRIPKLVLQ 459 Query: 459 PLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIER----VEANEMP 514 P++ENA+ +G V + GN + I RD G GI + + +E E Sbjct: 460 PMIENAVKYGFGNQLNLRVELKAYIHQGNLMMIC-RDDGVGIPQENLSELNAMLEQKENT 518 Query: 515 GNKIGLLNVHHRVKLLYGE--GLHIRRLEP-GTEIAFYIPNQRTPV 557 GL N+H R+ +LYG G+ IR E GT + +P R P+ Sbjct: 519 SRHSGLYNIHRRIAILYGRPYGVEIRSTEGHGTTLVVTLPADREPL 564 >UniRef50_A8VUV2 Sensor protein n=2 Tax=Bacillus selenitireducens MLS10 RepID=A8VUV2_9BACI Length = 1007 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 86/245 (35%), Positives = 126/245 (51%), Gaps = 18/245 (7%) Query: 321 HAHQITSSLQEMAVGLSQIISTQLEVS----RAEQLREMANKA------ELRALQSKINP 370 HA I S + G + +S +E+S R + L EM + A E LQS+I P Sbjct: 767 HAADIISGFE---AGANDYVSKPVELSELQARVQTLTEMKHSAQKQIETEAALLQSQIRP 823 Query: 371 HFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQ-IDIKKELYQIKDYIAI 429 HFL+N LNAI+S + NPD +L++ YL+++ L + +++E+ IK Y+ I Sbjct: 824 HFLYNTLNAIASLSQKNPDRMVELLYEFGDYLKHSFRLPTTSGLVTLEEEMALIKPYLFI 883 Query: 430 EQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRV 489 EQ RF D+LT+ DI +E +P L IQ L+ENAI HG G V++ Sbjct: 884 EQTRFEDRLTLSVDIADETTIHVPRLAIQTLMENAINHGALKSSAAGEVSLRAHRNEEGA 943 Query: 490 RIAVRDTGHGIDPKVIERV--EANEMPGNKIGLLNVHHRVKLLYGEGLHI-RRLEPGTEI 546 I + D G G ++ + + + NE IGLLN H R+K L G+GL I R G I Sbjct: 944 LITITDNGPGQADELRQLLSHQTNEQT-KGIGLLNAHTRIKHLNGKGLVIDNRSGGGIII 1002 Query: 547 AFYIP 551 ++P Sbjct: 1003 TVFLP 1007 >UniRef50_UPI0001850905 two-component sensor histidine kinase n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850905 Length = 486 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 123/212 (58%), Gaps = 11/212 (5%) Query: 350 EQLREMANKAELRALQSKINPHFLFNALNAISSSIRLN-PDTARQLIFNLSRYLRYNIEL 408 +Q + + +++L +LQS+INPHFL+N LN +S L + L+ +++ LRYN++ Sbjct: 263 QQNKLLLQESQLISLQSQINPHFLYNTLNTLSKKAYLEGSEETSDLLVSVAGLLRYNLK- 321 Query: 409 KDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVH 467 + D+ + E++ +K Y+ I++ARF D+L DI+E+ ++ IP L +QP+VENA++H Sbjct: 322 RLDKSTTLLDEVHVLKQYMDIQKARFTDRLHFHMDIEEDCLSVQIPRLTLQPIVENAVIH 381 Query: 468 GIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV---EANEMPGNK--IGLLN 522 ++P + G + V R+RI + D G GI + I + E+ + G+ IG+ N Sbjct: 382 AVEPNEDGGHIWFRVYRQNERIRIEIEDDGDGISEENIRAILEGESRDTEGHSTGIGMSN 441 Query: 523 VHHRVKLLYGEG---LHIRRLEPGTEIAFYIP 551 V +R++L Y E L R E GT + IP Sbjct: 442 VVNRLRLFYNETNILLFERDREKGTRVILMIP 473 >UniRef50_Q2N6L9 Sensor histidine kinase n=3 Tax=Erythrobacter RepID=Q2N6L9_ERYLH Length = 416 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 70/194 (36%), Positives = 110/194 (56%), Gaps = 14/194 (7%) Query: 348 RAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRL-NPDTARQLIFNLSRYLRYNI 406 R E+ R A AELR+L+ ++NPHFLFN LN++SS + + A ++I +SR+ R++ Sbjct: 210 RGERFRSAAKAAELRSLRYQVNPHFLFNTLNSLSSLVMTGKAERAEEMIQAMSRFYRHS- 268 Query: 407 ELKDDEQIDIK--KELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVEN 463 L DD D++ E + Y+ IEQ RF ++L + + + + NC +P +++QPLVEN Sbjct: 269 -LADDTTADVQLADEFELQRHYLEIEQLRFPERLKIDFILPPALENCRVPGMILQPLVEN 327 Query: 464 AIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNV 523 A+ +G+ P +T+S E +R+ I V D G G+ PK PG IGL NV Sbjct: 328 AVKYGVAPVNRPVTITVSADEEFDRLVIRVADDGPGV-PK-------GTKPGFGIGLANV 379 Query: 524 HHRVKLLYGEGLHI 537 R++ +G I Sbjct: 380 KDRIEARFGRDATI 393 >UniRef50_Q0VM26 Two-component system sensor protein, alginate biosynthesis n=3 Tax=Gammaproteobacteria RepID=Q0VM26_ALCBS Length = 344 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 73/189 (38%), Positives = 109/189 (57%), Gaps = 16/189 (8%) Query: 350 EQLREMAN---KAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNI 406 EQLR+ +A ++ALQS+I PHFLFN++N I+S I ++PD A Q++ +LS R ++ Sbjct: 145 EQLRQKDQAELQARIQALQSRIRPHFLFNSMNIIASLIAVDPDAAEQVVEDLSVLFRASL 204 Query: 407 ELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCC-IPSLLIQPLVENAI 465 + +E +++E + YI IEQ R G++L V +DI + IP L +QPL+ENAI Sbjct: 205 KNSGNE-ASLEEEFELCRRYIHIEQLRMGERLQVEWDIQVDAKSLKIPLLTLQPLLENAI 263 Query: 466 VHGIQPCKGKGVVTI-SVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVH 524 HGIQP G+VTI ++A GN V G GN++ L N+ Sbjct: 264 YHGIQPLSAGGMVTIRALAHNGNLVLSVSNPKPEG----------DGHHKGNRMALENIR 313 Query: 525 HRVKLLYGE 533 HR++ LYG+ Sbjct: 314 HRLEALYGD 322 >UniRef50_C0D7L3 Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D7L3_9CLOT Length = 179 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 71/186 (38%), Positives = 104/186 (55%), Gaps = 10/186 (5%) Query: 370 PHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIE-LKDDEQIDIKKELYQIKDYIA 428 PHF++N L++I + I+L+PD A L+++ S+YLR NI+ + I +EL I++Y Sbjct: 1 PHFIYNTLSSIRTLIKLDPDRAYNLVYDFSKYLRANIDSIGQGGMIPFAQELEHIRNYCN 60 Query: 429 IEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNR 488 IE+ RFGDKL ++Y+I + +P L +QPLVENAI HGI+ G G V +S E + Sbjct: 61 IEKVRFGDKLALVYEIGPD-GFEVPPLTVQPLVENAIKHGIRGKNGDGTVKVSTLEDEHS 119 Query: 489 VRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRRLE-PGTEIA 547 + V D G G DP A +P GL N+ R++ + G L I + GT Sbjct: 120 YMVEVLDDGAGFDP-------AAGVPKTSAGLENIRLRLQEIAGACLEINSIPGKGTRAI 172 Query: 548 FYIPNQ 553 IP Q Sbjct: 173 VRIPKQ 178 >UniRef50_D2Q7Y2 Two component system histidine kinase sensor n=1 Tax=Bifidobacterium dentium Bd1 RepID=D2Q7Y2_9BIFI Length = 438 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 85/253 (33%), Positives = 130/253 (51%), Gaps = 26/253 (10%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQ---------SKINPHFLF 374 + S+L MAV + + SR+ + +AN EL+ALQ S+INPHF+ Sbjct: 186 SLVSNLFNMAVSVLLGLCISWYKSRSHFGQLLANDKELKALQHAARVQIMVSQINPHFVC 245 Query: 375 NALNAISSSIRLNPDTARQLIFNLSRYLRYNIE-LKDDEQIDIKKELYQIKDYIAIEQAR 433 N L I + + D A++ + S Y+R N + + E + EL +K Y+++EQ R Sbjct: 246 NVLATIQAMCDTDVDKAKEALGLFSAYMRDNTDAVARTEPVPFAMELQHVKRYVSLEQMR 305 Query: 434 FGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAV 493 FGDKL V+YDID + +P+L +QP++ENAI HGI + G V +S E VRI + Sbjct: 306 FGDKLAVMYDIDT-TDFRLPALTVQPIIENAIKHGIGKKENGGFVRLSARERQGVVRIEI 364 Query: 494 RDTGHGIDPKVI-----------ERVEANEMPG-NKIGLLNVHHRVKLLYGEGLHIRRLE 541 D G G+D + + E V+ E G + +GL NV R++L+ L + + Sbjct: 365 ADNGVGMDERTLYGLTGSILQTAESVDRPEGDGRSHVGLTNVRERLRLMSHGTLAVSS-Q 423 Query: 542 P--GTEIAFYIPN 552 P GT + IP Sbjct: 424 PGRGTTVIISIPK 436 >UniRef50_C4G6T4 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G6T4_ABIDE Length = 593 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 123/212 (58%), Gaps = 15/212 (7%) Query: 354 EMANKA-ELRALQSKINPHFLFNALNAIS-SSIRLNPDTARQLIFNLSRYLRYNIELKDD 411 E+ NK E + LQS++NPHFL+N L+AI+ + + L+ +S +R +I K Sbjct: 369 EILNKEMEFKTLQSQMNPHFLYNTLDAINWLAFKEKQTEICNLVAAISSLIRASISNKKS 428 Query: 412 EQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQ 470 I I++EL +K+YI I+ R+ D+ IYDIDE + +P L+IQP+VENAI+HGI+ Sbjct: 429 -IITIEQELDYVKNYIYIQHIRYKDRFDTIYDIDESLLKQAVPKLIIQPIVENAIIHGIE 487 Query: 471 PCKGKGVVTISVAECGNRVRIAVRDTGHGI-DPKVIE------RVEANEMPGN-KIGLLN 522 K K ++ IS+ + I V+DTG G+ D KV E E +E + +GL Sbjct: 488 NSKNKNLLYISIKRENECIVIIVKDTGIGMTDEKVSELLKEPLNAEGDEQKAHTNLGLYA 547 Query: 523 VHHRVKLLYGE--GLHIR-RLEPGTEIAFYIP 551 VH R++L+YG+ GL + + GT + +IP Sbjct: 548 VHKRIQLMYGDLYGLAVHSQAGEGTTVTLHIP 579 >UniRef50_C6CWF5 Putative sensor with HAMP domain n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWF5_PAESJ Length = 491 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 82/250 (32%), Positives = 128/250 (51%), Gaps = 18/250 (7%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 ++ + + M L+ ++ E +E+L + EL+ALQS+INPHFLFN LN +S Sbjct: 232 LSEAFRHMIKDLNDLMGRDKERMESERL---VKELELQALQSQINPHFLFNTLNVLSKLA 288 Query: 385 RLN-PDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 L D LI ++S+ +RYN+ + D + + EL +++Y I+QARF +++ Sbjct: 289 LLEGADRTSDLIVSMSKLIRYNLS-QLDRPVTLGDELKHVREYFTIQQARFRNRVETRQQ 347 Query: 444 IDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 IDE V + IP+L IQPLVENA VHG++ + G++ + + G V I +RD G G+ Sbjct: 348 IDESVLDMLIPALTIQPLVENAFVHGVERMESGGIIQLVMERAGENVSIVIRDNGAGMTM 407 Query: 503 KVIE-----RVEANEMPGNK----IGLLNVHHRVKLLYGEGLHIR-RLEP--GTEIAFYI 550 + + A P K G NV R++L Y + EP GT + + Sbjct: 408 EESNALLSLQEPAQPAPAKKNSMGFGTRNVIKRLRLFYNRRDVVSIESEPGRGTSVILLL 467 Query: 551 PNQRTPVASQ 560 PN A Q Sbjct: 468 PNPSDAGAEQ 477 >UniRef50_C4FYZ1 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FYZ1_ABIDE Length = 619 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 82/248 (33%), Positives = 129/248 (52%), Gaps = 34/248 (13%) Query: 308 KGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQL--EVSRAEQLREMANKAELRALQ 365 K ++G +I H M V L ++I T E+ R K EL+ LQ Sbjct: 370 KKAISGDDEISILDEH-----FSHMLVKLDKLIKTNYVQELDRK--------KLELKNLQ 416 Query: 366 SKINPHFLFNALNAISSSIRLNP-----DTARQLIFNLSRYLRYNIELKDDEQIDIKKEL 420 +INPHFL+N L ISS +N D + +L RY++ + + + EL Sbjct: 417 LQINPHFLYNTLETISSIAAVNKVFIIGDISGKL----GEIFRYSLGKNYGDFVSLNDEL 472 Query: 421 YQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVT 479 I++YI I++ R+GDKL V YDI+ V NC IP ++QP++EN+I+HGI P G + Sbjct: 473 KHIENYIFIQKVRYGDKLEVFYDIENGVENCLIPRFILQPIIENSILHGIAPKATGGTIE 532 Query: 480 ISVAECGNRVRIAVRDTGHGIDPKVIERVEA---NEMPGNK----IGLLNVHHRVKLLYG 532 I+V+ +++ I + D G G+D E + A + M N+ +G+ NV+ R+K +YG Sbjct: 533 INVSLEESKLVIRIEDDGIGMDSDYAELINAAINSPMTDNEDSTGVGMRNVNQRIKFIYG 592 Query: 533 E--GLHIR 538 GL ++ Sbjct: 593 NEYGLKLK 600 >UniRef50_C1I3A2 Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I3A2_9CLOT Length = 583 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 71/198 (35%), Positives = 117/198 (59%), Gaps = 6/198 (3%) Query: 359 AELRALQSKINPHFLFNALNAISSSIRLN-PDTARQLIFNLSRYLRYNIELKDDEQIDIK 417 AEL LQ++INPHFL+N L+ + + +N D A ++++ S+ LR NI + E I ++ Sbjct: 386 AELSFLQAQINPHFLYNTLSGVRFLVSMNRNDDAEEMLYKFSKLLR-NILPRASELISLE 444 Query: 418 KELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKG 476 E+ IK YI ++Q R+ D V IDE++ N +P+L++QP+VENAI + ++ KG Sbjct: 445 DEIEIIKTYIELQQIRYPDGFKVDIAIDEKIKNTMVPALILQPIVENAIFYSMESENNKG 504 Query: 477 VVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGE--G 534 + I+ + I + D G G+ I V N+ N++G++NVH R++L YG+ G Sbjct: 505 EIKINGYVNHEYIIIEISDNGKGMSSIQINNVFKNKESINRVGVINVHERIQLNYGKEYG 564 Query: 535 LHIRRLE-PGTEIAFYIP 551 + I+ E GT + F +P Sbjct: 565 IEIKSQEGKGTIVIFKLP 582 >UniRef50_C6IZN7 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZN7_9BACL Length = 597 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 82/240 (34%), Positives = 132/240 (55%), Gaps = 14/240 (5%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKA-ELRALQSKINPHFLFNALNAISS 382 Q++ M + +++ +E + E+A + +L+ + S+INPHFLFNAL +I Sbjct: 355 QLSRQFNYMVDSIRRLMDQVVEKTEQNNALELAQREIKLKMMASQINPHFLFNALESIRM 414 Query: 383 SIRLNPDTA-RQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVI 441 + L D ++ L + +R N+E+ E +K+EL + Y+ I++ R+ D+LT Sbjct: 415 NAHLKGDKEIANVVRLLGKMMRKNLEV-GRESTPLKEELEMVSSYLEIQKFRYEDRLTYT 473 Query: 442 YDIDEEVNCC-IPSLLIQPLVENAIVHGIQPCKGKGV-VTISVAECGNRVRIAVRDTGHG 499 ID +P L+IQPLVENA+VHG++ K +GV V +++ VR++V+D G G Sbjct: 474 LSIDPAARSIRVPPLIIQPLVENAVVHGVED-KEEGVHVEVNIQRDEGLVRVSVQDNGMG 532 Query: 500 IDPKVIERVE-----ANEMPGNKIGLLNVHHRVKLLYGE--GLHI-RRLEPGTEIAFYIP 551 + P+ ++ V E +IGL NVH R+ L YGE GL I GT+I+F IP Sbjct: 533 MTPERLDEVMRFISGTKEPEQGRIGLRNVHQRLVLSYGEEHGLQIVSEYGVGTKISFTIP 592 >UniRef50_C5EEW5 Sensor histidine kinase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EEW5_9FIRM Length = 488 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 82/218 (37%), Positives = 120/218 (55%), Gaps = 11/218 (5%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSR-AEQLREMA---NKAELRALQSKINPHFLFNALNA 379 Q+ ++ +M + +I+T E EQL E KA ALQS+INPHFLFN LN Sbjct: 238 QLNLAVNQMKDSMKSVITTLHEKQELTEQLYEQEMELEKARFSALQSQINPHFLFNTLNV 297 Query: 380 ISSSIRLN-PDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 I+ + T +LI +LSR RY++E D ++ + +EL IKDYI IE+ RFG++L Sbjct: 298 INGMADMEGAGTTGELIRSLSRLFRYSLENHSD-RVPLFQELTVIKDYIYIEKKRFGERL 356 Query: 439 TVIYDIDEEVNCC-IPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTG 497 + + D ++ IPS +QPLVEN+I HGI GVV I + E G + I V D G Sbjct: 357 SYVLKADVDLESYEIPSFTLQPLVENSIRHGILVRPKGGVVAIRIMERGEELVIQVLDNG 416 Query: 498 HGIDPKVIERV----EANEMPGNKIGLLNVHHRVKLLY 531 G++ E + E + + IG NV R++L++ Sbjct: 417 AGMEKAQREMLLAGKERQDNHASGIGTGNVFRRLRLMF 454 >UniRef50_UPI0001788E92 integral membrane sensor hybrid histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788E92 Length = 1049 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 111/193 (57%), Gaps = 6/193 (3%) Query: 364 LQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKD-DEQIDIKKELYQ 422 LQ++I PHFL N LN+I+S ++P LI S YLR + ++ + D I +++EL Sbjct: 853 LQAQIQPHFLHNTLNSIASLSEVDPSRMIALIAEFSHYLRASYDISNLDRFIPLEQELGL 912 Query: 423 IKDYIAIEQARFGDKLTVIYDIDEEV---NCCIPSLLIQPLVENAIVHGIQPCKGKGVVT 479 ++ Y+ IE RFG++L V + I +EV +P L +Q +VENA+VHG+ G VT Sbjct: 913 VRSYLYIEGERFGERLRVRWHISDEVAVQQWKLPPLTMQTIVENAVVHGVLARTQGGTVT 972 Query: 480 ISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNK-IGLLNVHHRVKLLYGEGLHI- 537 I + ++ + D G G+DP+ + R+ + K +GL+N R+K +YG+GL I Sbjct: 973 IRIVREAESAKVIIADDGAGMDPEKLRRMLGSGHRATKGVGLMNTDRRLKQIYGQGLMID 1032 Query: 538 RRLEPGTEIAFYI 550 + GT ++F I Sbjct: 1033 SSRDRGTTVSFVI 1045 >UniRef50_B8I426 Putative sensor with HAMP domain n=2 Tax=Clostridium RepID=B8I426_CLOCE Length = 627 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 74/197 (37%), Positives = 117/197 (59%), Gaps = 18/197 (9%) Query: 358 KAELRALQSKINPHFLFNALNAISSSIRLN--PDTARQLIFNLSRYLRYNIELKDDEQID 415 +AEL+ALQS+INPHFLFN L +I+ +LN P+ + ++ +LS L +I +DD I Sbjct: 400 EAELKALQSQINPHFLFNTLESINWMAQLNNVPEIS-NIVTDLSALLEASIG-RDDRLIP 457 Query: 416 IKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKG 474 I++E I YI++ + RF DK+T+ +ID +V IP LLIQPL+ENA+ HG++ + Sbjct: 458 IEEEFMYIDKYISLLKRRFEDKITLKKEIDPQVLYIKIPRLLIQPLIENAVYHGVESSRE 517 Query: 475 KGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN-------------EMPGNKIGLL 521 KGV+ ++ G+ + + V D G+GI + + ++ + E IG+ Sbjct: 518 KGVIMLNARIQGDTILLEVIDNGNGISKEDLLKLNKSLEMDNDTYFKSLREKKNKSIGID 577 Query: 522 NVHHRVKLLYGEGLHIR 538 NV+ R+KL YGE I+ Sbjct: 578 NVNRRIKLFYGEKYGIK 594 >UniRef50_C5RJU0 Cache sensor signal transduction histidine kinase n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJU0_CLOCL Length = 588 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 81/246 (32%), Positives = 139/246 (56%), Gaps = 24/246 (9%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRA--EQL---REMANKAELRALQSKINPHFLFNALN 378 QI + ++ V LSQ + L R+ Q+ +E K+EL ALQS+INPHFL+N L+ Sbjct: 345 QIDAKGEDEVVKLSQAFNLMLSKVRSLMSQIVIEQESKRKSELDALQSQINPHFLYNTLD 404 Query: 379 AISSSIRLNPDTARQ----LIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARF 434 +I + + + Q ++ +L++ R +I K I +++E+ ++Y+ I++ RF Sbjct: 405 SI---VWMAENGKSQDVITMVTSLAKLFRISIS-KGRNIISVEQEIEHARNYLIIQKIRF 460 Query: 435 GDKLTVIYDID---EEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRI 491 +K T YDI+ E ++ L++QPL+EN+I HGI+ + +G + IS + ++ Sbjct: 461 KNKFT--YDIETDPETMHLKTTKLILQPLIENSIYHGIEYMQDQGYIKISTSIVDGKLLF 518 Query: 492 AVRDTGHGIDPKVIERV---EANEMPGNKIGLLNVHHRVKLLYGE--GLHIR-RLEPGTE 545 + D G GI+P+ + + E G+ IG+ NVH R++L YG+ GL I+ LE GT Sbjct: 519 EISDNGLGIEPEKLPHLLEYETEPKAGSGIGVKNVHERIQLTYGKEYGLEIKSELEEGTN 578 Query: 546 IAFYIP 551 I ++P Sbjct: 579 IKIWLP 584 >UniRef50_C5EPK6 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EPK6_9FIRM Length = 616 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 76/231 (32%), Positives = 134/231 (58%), Gaps = 9/231 (3%) Query: 328 SLQEMAVGLSQIISTQLEVSRAEQLREMANKAELR--ALQSKINPHFLFNALNAISSSIR 385 ++QEM+ G + + Q+ + Q + E R LQS++NPHFLFN L +I+ + Sbjct: 383 NIQEMS-GRIKALMDQVVRDKEIQQQNQYQLLEFRYHELQSQVNPHFLFNILQSINGIAQ 441 Query: 386 LNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDI 444 +N D +LI LS++ R N+E + + +++EL K+Y+ + + + D+L + +D+ Sbjct: 442 INGDRQVSRLICMLSKFFRGNLE-RRNVSCQLREELEYSKNYLELYKDIYPDRLDIEWDV 500 Query: 445 DEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPK 503 DE ++ IP+ ++QP+VEN++VHG++P G + I + E G + I+V D G GI P+ Sbjct: 501 DERFLDVGIPTYILQPIVENSLVHGMEPMIGTCTIRIRIREQGGCLVISVWDDGQGITPE 560 Query: 504 VIERVEANEMPGNKIGLLNVHHRVKLLYGE--GLHIR-RLEPGTEIAFYIP 551 ++++ A IG+ NV R+++LYG+ GL IR TE+ +P Sbjct: 561 KLKQLMAGTGESRHIGIRNVQDRIQMLYGKEYGLTIRSEYHEYTEVRLRLP 611 >UniRef50_D2QR46 Signal transduction histidine kinase, LytS n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QR46_9SPHI Length = 491 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 63/185 (34%), Positives = 100/185 (54%), Gaps = 12/185 (6%) Query: 351 QLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKD 410 + ++ +AEL ALQ+KINPHFL+NALN+I+S + NPD A ++ LS+ RY+ Sbjct: 283 NMEKLKTRAELDALQAKINPHFLYNALNSIASLVHENPDKAEEMTLLLSKLFRYSTGRNG 342 Query: 411 DEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV--NCCIPSLLIQPLVENAIVHG 468 + + EL ++ Y+ +EQ RFG++LT +I +P L+QP+VENAI HG Sbjct: 343 ELFASLADELEMVRTYLQVEQVRFGNRLTFSVEISNPALNELQLPQFLLQPIVENAIKHG 402 Query: 469 IQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVK 528 I G + + + E + + + V D G + G GL ++ ++K Sbjct: 403 IAKRADLGRIDVRIYEKSDELHLCVHDNGPAFPDDM----------GGGYGLRSIQDKLK 452 Query: 529 LLYGE 533 LLYG+ Sbjct: 453 LLYGD 457 >UniRef50_C1AAX4 Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AAX4_GEMAT Length = 353 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 71/211 (33%), Positives = 113/211 (53%), Gaps = 15/211 (7%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 + + L M V Q + + A+ LR +AEL AL+ +++PHFLFN L+++ + Sbjct: 133 VIAGLTWMGVASKQSQEMESQRHEADALRV---RAELEALRGRLDPHFLFNTLHSLMALS 189 Query: 385 RLNPDTARQLIFNLSRYLRYNIELKDD--EQIDIKKELYQIKDYIAIEQARFGDKLTVIY 442 RL+P Q + LS LRY ++ K EQ+ + EL+ ++ Y+A+E R+G++L V Sbjct: 190 RLDPARTEQALGQLSDLLRYVLDSKRGAREQVQLADELHFVRTYLALEALRYGERLRVSI 249 Query: 443 DI-DEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGID 501 DI D+ ++ +PSL +QP+VENAI H + P G + +S + + V D G Sbjct: 250 DIEDDTLDFVVPSLTVQPIVENAIRHAVAPRADGGHIALSARFDAESLILTVADDGPA-- 307 Query: 502 PKVIERVEANEMPGNKIGLLNVHHRVKLLYG 532 A G IGL +H R++LLYG Sbjct: 308 -------SAAPSGGTGIGLDALHRRLRLLYG 331 >UniRef50_Q0K9J0 Signal transduction histidine kinase n=2 Tax=Cupriavidus RepID=Q0K9J0_RALEH Length = 391 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 71/226 (31%), Positives = 120/226 (53%), Gaps = 19/226 (8%) Query: 309 GVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKI 368 G++ IY+ + + +SL+ A L+ + E+ + +A+L ALQ++I Sbjct: 130 GMLAAASMIYFYWSREKLASLERQAA---------LDALQREEAEKQLVRAQLMALQAQI 180 Query: 369 NPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIA 428 PHFLFN+L + I +P ARQL+ L +LR ++ EQ +++E ++ Y+ Sbjct: 181 EPHFLFNSLANLDGLIATDPPAARQLLQRLIGFLRMSLAHTRAEQCTLRQEFELLRSYLD 240 Query: 429 IEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECG- 486 I+ RFG +L+ D+ E+ IP +LIQPLVENA+ HGI+PC G + +S G Sbjct: 241 IQGMRFGQRLSFDIDLPRELAKVEIPPMLIQPLVENAVTHGIEPCMIGGHIRLSARAAGD 300 Query: 487 NRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYG 532 N V++ + DTG G + G+ +G+ +V R+ ++G Sbjct: 301 NAVQVIIADTGVGFGHASGK--------GSGLGITHVRERLARIFG 338 >UniRef50_Q1JFY4 Two-component sensor kinase yesM n=47 Tax=Streptococcus RepID=Q1JFY4_STRPD Length = 577 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 77/235 (32%), Positives = 129/235 (54%), Gaps = 12/235 (5%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSS 383 ++T Q+ L QI S + V+ E + + L+AL S+INPHFL+N L+ I Sbjct: 336 ELTDLAQQFNALLDQIDSLMVAVADKE---KAIGQYRLQALASQINPHFLYNTLDTIIWM 392 Query: 384 IRLNPDTAR--QLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTV- 440 N D+ R ++ +L++Y R + + +E I + EL + Y+ I++ R+GDKL+ Sbjct: 393 AEFN-DSKRVVEVTKSLAKYFRLALN-QGNEYIRLADELDHVSQYLFIQKQRYGDKLSYE 450 Query: 441 IYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGI 500 + +D + IP L++QPLVENAI HGI+ KG++ ++V++ + + V D G GI Sbjct: 451 VQGLDVYADFVIPKLILQPLVENAIYHGIKEVDRKGMIKVTVSDTAQHLVLTVWDNGKGI 510 Query: 501 DPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPN 552 + + ++ G +GL NV R+KL YG+G H+ + + TEI +P Sbjct: 511 EDSSLTNSQSLLARGG-VGLKNVDQRLKLHYGKGYHMTIHSQSDHFTEIQLSLPK 564 >UniRef50_Q21NI6 Histidine kinase internal region n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21NI6_SACD2 Length = 380 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 85/254 (33%), Positives = 129/254 (50%), Gaps = 12/254 (4%) Query: 311 VTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINP 370 ++ TL Y H +Q+ +AV L+ Q E + + +A +A+L+ L+ +INP Sbjct: 133 LSWTLLFYCIHYYQLQQEEHLIAVDLAA--QRQEEYLKRLKAETIAKEAQLKMLRYQINP 190 Query: 371 HFLFNALNAISSSIRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAI 429 HFLFN LNAI + L D A +I LS +LRY++E I ++KE+ +K Y+ I Sbjct: 191 HFLFNTLNAIKGLVYLKENDVAADMILRLSTFLRYSLESNPLLNISLEKEVESLKVYLDI 250 Query: 430 EQARFGDKLTVIYDI-DEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNR 488 E RF ++L V Y I D+ +PS+++QP+VENAI + I P + G + I Sbjct: 251 EVVRFAERLKVEYKITDKAKKASVPSMILQPIVENAIKYAIAPSENGGTIEIKGWVDDTF 310 Query: 489 VRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTE 545 + IAV D G GI A++ G +GL N R+ LY + + G Sbjct: 311 LCIAVCDDGPGIG----FTTPADKPEGCGVGLQNTQERLVTLYEDDYQFTLSNKAGGGLR 366 Query: 546 IAFYIPNQRTPVAS 559 + +P Q T VAS Sbjct: 367 VYIRVPYQ-TVVAS 379 >UniRef50_B0K233 Integral membrane sensor signal transduction histidine kinase n=10 Tax=Thermoanaerobacterales RepID=B0K233_THEPX Length = 502 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 79/237 (33%), Positives = 131/237 (55%), Gaps = 29/237 (12%) Query: 340 ISTQLEVSRAEQLREMAN--------KAELRALQSKINPHFLFNALNAISS-SIRLNPDT 390 I Q EV + + +EM N +AEL+ALQS+INPHFLFN LNA + ++ D Sbjct: 261 IKNQAEVEKKLKEQEMQNLKMRNILKEAELKALQSQINPHFLFNTLNAAAQLAMMEGADK 320 Query: 391 ARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-N 449 + + I N++ RYN++ K D + ++ E+ +K Y+ I + RFGD++ D+DE V + Sbjct: 321 SSEFIENVANLFRYNLK-KLDTTVTLQDEINNVKTYMYILKTRFGDRVDFKVDVDEGVLD 379 Query: 450 CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVE 509 +P +IQP+VENA +HG++ + G + ++V + ++V I V D G G+ E+V Sbjct: 380 VEMPCTIIQPVVENAFIHGLEDTEKGGFIKLAVKKDNDKVLIEVIDNGIGMSE---EKVR 436 Query: 510 A-----NEMPGNK----IGLLNVHHRVKLLYGEG-----LHI-RRLEPGTEIAFYIP 551 A NE + IG+ N+ +R++L Y + I ++ GT++ IP Sbjct: 437 AILSADNEDLSKRHVTGIGMHNIINRLRLFYNTSAIEDVIEIDSKIGEGTKVTLKIP 493 >UniRef50_A6TTD2 Histidine kinase internal region n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TTD2_ALKMQ Length = 578 Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 78/212 (36%), Positives = 118/212 (55%), Gaps = 20/212 (9%) Query: 358 KAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQ--ID 415 +AEL+ALQ++INPHFL+N L A+ S+ + +++ +S RY I EQ + Sbjct: 368 QAELKALQAQINPHFLYNTLEALYWSLEEKGEELAEVVVAMSDLFRYTISGPKVEQEWVL 427 Query: 416 IKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGK 475 +K+EL ++ Y+ + + RFGD+LT + N IP LLIQPLVENAI+HG+ G+ Sbjct: 428 VKEELEHVERYLQVMKMRFGDRLTWYVSSPSDCNVKIPKLLIQPLVENAILHGVGNKNGQ 487 Query: 476 GVVTISVAECG--NRVRIAVRDTGHGIDPKVIE---------RVEANEMPGNKIGLLNVH 524 G V++ V + +R+ I V D G GI+ + RV + + G + + NVH Sbjct: 488 GTVSVIVEDFKLHSRLVIKVIDDGPGIEVDALYSIMQSLKFGRVASIKEKG--MAIANVH 545 Query: 525 HRVKLLY----GEGLHIR-RLEPGTEIAFYIP 551 R+KL Y G GL I ++ GT + F IP Sbjct: 546 KRLKLYYKDDEGSGLSIESKVNQGTCVTFEIP 577 >UniRef50_A6TRZ9 Histidine kinase internal region n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TRZ9_ALKMQ Length = 503 Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 75/228 (32%), Positives = 127/228 (55%), Gaps = 21/228 (9%) Query: 325 ITSSLQEMAVGLSQII---------STQLEVSRAEQLR--EMANKAELRALQSKINPHFL 373 + + ++M V + Q I T+L+ E L+ + AEL++LQS+INPHFL Sbjct: 243 LAKAFEKMVVNIRQYILEIKRQAAVETKLKEQEMENLKVKSLLKDAELKSLQSQINPHFL 302 Query: 374 FNALNAISS-SIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQA 432 FN LNA S S+ D A + I ++++ RYN+ K +E ++I +E+ +++Y+ I + Sbjct: 303 FNTLNAASQLSMMEGADNASEFIESIAKLFRYNLR-KLEEPVNISEEINYVRNYMHILKT 361 Query: 433 RFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRI 491 RFG ++ +IDE V +P ++IQP+VENA +HG++ + +G +++ V ++I Sbjct: 362 RFGSRIAFCTEIDESVLEIKMPCMIIQPIVENAFIHGLENQEEEGKISLVVKHVEGEIQI 421 Query: 492 AVRDTGHGIDPKVIERVEANEMPG-------NKIGLLNVHHRVKLLYG 532 V D G G+ K IE + + E G IG+ NV R++L Y Sbjct: 422 KVIDDGTGMTEKQIENLLSLEPTGPIVKGHTTGIGIHNVIDRLRLYYN 469 >UniRef50_C5EHR4 Histidine kinase internal region n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHR4_9FIRM Length = 579 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 121/209 (57%), Gaps = 10/209 (4%) Query: 351 QLREMANKAELRALQSKINPHFLFNALNAISSSIRL--NPDTARQLIFNLSRYLRYNIEL 408 Q + + EL LQ++INPHF++N L +I + + N + +R L+ + + LR + Sbjct: 370 QKEKQKRRMELSFLQAQINPHFMYNTLFSIKCMVDMEKNEEASRMLV-SFIQLLRSTLS- 427 Query: 409 KDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVH 467 +E + I++E ++ Y+ I++ R+ D VI++ DE V IP LLIQPL+ENAI H Sbjct: 428 NPNEFVMIREEFQVLRQYVEIQKFRYDDGFQVIFECDEGVEEKKIPKLLIQPLLENAIFH 487 Query: 468 GIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNK--IGLLNVHH 525 G++ KG+G++ I+ V + V D G GI P+ IE++ E G K +G++NV Sbjct: 488 GVEFKKGEGLIIITARALDGGVAVTVEDNGMGIAPETIEKINRGERMGEKAHVGIVNVKE 547 Query: 526 RVKLLYG--EGLHIRRLE-PGTEIAFYIP 551 R++L +G G+ I ++ GT+I +P Sbjct: 548 RIQLNFGGNYGMKIESVQWEGTKIILNLP 576 >UniRef50_B0NDZ6 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NDZ6_EUBSP Length = 592 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 122/212 (57%), Gaps = 8/212 (3%) Query: 351 QLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTA-RQLIFNLSRYLRYNIELK 409 Q + + +E+ ALQ+++NPHFL N LN I+ +++ + Q++ +L +L+ N K Sbjct: 372 QKQLLLKNSEIHALQTQMNPHFLLNTLNTIAWKAQISDNEEIYQMVISLGEFLKANTLSK 431 Query: 410 DDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHG 468 + + I ++KEL +K YI ++Q RF DK++ + E ++ IP IQPLVENAIVHG Sbjct: 432 EQDCIALEKELRYVKFYIYLQQQRFEDKISCDIRVPETLMHFLIPCFSIQPLVENAIVHG 491 Query: 469 IQPCKGKGVVTISVAECGNR-VRIAVRDTGHGI--DPKVIERVEANEMPGNKIGLLNVHH 525 ++P GKG + + + E + + I++ D G G D +V + ++ IGL N+ Sbjct: 492 LEPKTGKGKLIVQILETDDHCMEISIIDNGVGFPKDFQVRDIASSDTDSHTHIGLKNLDR 551 Query: 526 RVKLLYGEGLHIR-RLEPG--TEIAFYIPNQR 554 R+ LLYG+ H+ PG T I+F IP R Sbjct: 552 RLFLLYGDMAHLSIDSTPGVCTSISFKIPISR 583 >UniRef50_Q1IJW3 Periplasmic senrsor signal transduction histidine kinase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJW3_ACIBL Length = 384 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 76/244 (31%), Positives = 124/244 (50%), Gaps = 19/244 (7%) Query: 317 IYYCHAHQITSSLQEMAVGLSQIISTQLEVSR----AEQLREMANKAELRALQSKINPHF 372 +Y H+ +T+ L V L+Q++ ++ E R EQ+R A +A + L+ ++ PHF Sbjct: 127 LYSLHSEGVTAYLS--VVVLAQLMWSKSEAQRRALAEEQMRRAAAEARIEMLRLQLQPHF 184 Query: 373 LFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQA 432 LFN LN + I +PD A +++F+++ LR I + +EL K + +IEQ Sbjct: 185 LFNCLNTAAELIHADPDAAERMLFSIADLLREIIGGMRSNTHTLAEELEFTKTFFSIEQL 244 Query: 433 RFGDKLTVIYDIDEEVNCC-IPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRI 491 RF +L + D+ + + CC +P++L+QPLVEN++ HG+ VV I + + Sbjct: 245 RFPSRLQLTIDVQDSLYCCMVPTMLLQPLVENSVKHGMSQTSNGLVVAIDALARDGNLEL 304 Query: 492 AVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRRLEP----GTEIA 547 VRD G G+ K N G GL N R+ LY +G H+ + P GT + Sbjct: 305 WVRDNGRGLPAKT------NGKNGG-TGLRNTRERLDHLY-KGSHMLAISPAKGGGTVVH 356 Query: 548 FYIP 551 +P Sbjct: 357 IVLP 360 >UniRef50_D2LZT5 Signal transduction histidine kinase, LytS n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LZT5_BACS4 Length = 477 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 66/220 (30%), Positives = 128/220 (58%), Gaps = 14/220 (6%) Query: 325 ITSSLQEMAVGLSQIIS-----TQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 + + + M + ++ +IS QLE +Q + + ++++ R+LQS+INPHFLFN LN Sbjct: 234 LAKTFERMRININNLISEIKYKAQLE-RELQQNKILLHESQFRSLQSQINPHFLFNTLNT 292 Query: 380 ISSSIRLN-PDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 +S L + L+ +++ LRYN++ + D + ++ E+ ++ Y+ I++ARF ++L Sbjct: 293 LSKKAYLEGSEETSDLLVSVAGLLRYNLK-RLDRSVTLQDEVNVLQQYMDIQKARFTERL 351 Query: 439 TVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTG 497 + ++D ++ IP+L +QP++ENA++H ++P + G + V + G VR+ + D+G Sbjct: 352 NLYMEVDSSCLDVKIPALTLQPIIENAVIHAVEPEEEGGSIYFRVIDEGESVRVEIEDSG 411 Query: 498 HGIDPKVIERVEA-----NEMPGNKIGLLNVHHRVKLLYG 532 G+D I+++ +E IG NV R++L YG Sbjct: 412 RGMDKGKIKQILEETHIDSEGHSTGIGFSNVVKRLRLFYG 451 >UniRef50_UPI000185136F histidine kinase internal region n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI000185136F Length = 596 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 70/212 (33%), Positives = 125/212 (58%), Gaps = 12/212 (5%) Query: 331 EMAVGLSQIISTQLEVSRAEQLREMANKA-ELRALQSKINPHFLFNALNAI-SSSIRLNP 388 E+ + ++ T E+ E L E+ NK +L+ LQS++NPHFL NAL +I +SS++ Sbjct: 357 ELGHHFTSMVETIDELFVREYLLELRNKTNQLKVLQSQVNPHFLNNALQSIGTSSLKQGD 416 Query: 389 DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV 448 QL+ +LS+ +RY++ +D + +++EL K Y+ +++ RF D+ T +D+++ Sbjct: 417 QETYQLLMSLSKIMRYSMNNIED-FVTLREELEHSKAYLHLQKQRFKDRFTFDISVDDDI 475 Query: 449 NCC-IPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIER 507 +P + IQP++EN HG++ + KG +TIS + N+ I+++D G G++ + IE Sbjct: 476 LLSQVPKMTIQPIIENYFKHGLEQDERKGHLTISCKKWENKKWISIQDNGKGMNEQEIEN 535 Query: 508 V-------EANEMPGNKIGLLNVHHRVKLLYG 532 + A E N IGL N++ R+K+ YG Sbjct: 536 LMVSLHSYNATEQE-NGIGLKNIYDRIKIYYG 566 >UniRef50_C6CT65 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CT65_PAESJ Length = 584 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 90/278 (32%), Positives = 150/278 (53%), Gaps = 32/278 (11%) Query: 290 EAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRA 349 +A R + S+ IP V + TL+I +++ ++ +M L+++I EV Sbjct: 315 KAMRGAKYGSLKPIP-----VTSSTLEI-----NELNNTYNQMVAYLNELI----EVVYE 360 Query: 350 EQLREMANKAELRALQSKINPHFLFNALNAISSSIR-LNPDTARQLIFNLSRYLRYNIEL 408 +++ + ++ EL+ALQ++INPHFLFN L A+ ++ + + Q++ +S RY I Sbjct: 361 KEI--IQSRTELKALQAQINPHFLFNTLEALYWALEDKDEEELSQVVVAMSGLFRYVINR 418 Query: 409 KD-DEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCC-IPSLLIQPLVENAIV 466 D DE + + EL + Y+ I + R D+L + DE + IP LLIQPLVENAI Sbjct: 419 ADGDEWVTVADELEHAERYLKIMEMRLIDRLKWSIEGDESLRGVPIPKLLIQPLVENAIS 478 Query: 467 HGIQPCKGKGVVTISV--AECGNRVRIAVRDTGHGIDPKVIERVEA-------NEMPGNK 517 HG++ G+G V I + E +RI+V D G G++ ++ + A ++ G Sbjct: 479 HGVEQRIGQGSVVIGIEKTERPGYIRISVTDNGPGMNFDKVQSLYAAMKQGHVHDAKGTG 538 Query: 518 IGLLNVHHRVKLLYG---EGLHIRRLE-PGTEIAFYIP 551 +G+ NV R++L YG EGL I+ + GT ++F IP Sbjct: 539 VGISNVDRRIRLYYGEETEGLQIQSEQGTGTRMSFEIP 576 >UniRef50_D2MJZ9 Sensor signal transduction histidine kinase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MJZ9_9BACT Length = 661 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 77/224 (34%), Positives = 120/224 (53%), Gaps = 23/224 (10%) Query: 344 LEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLR 403 ++V R ++++++A ++ELRAL++++NPHFLFNAL I I+ +P A + L+ LR Sbjct: 426 VQVFREQEIQKLATESELRALRAQLNPHFLFNALTTIGYLIQTSPAKAVDTLMQLTDLLR 485 Query: 404 YNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVE 462 + D E + E+ I+ Y+ IE+ RF D+LTV D+ + V + IP+L++QPLVE Sbjct: 486 SVLMRLDKELTTVGHEMDLIRAYLEIERMRFEDRLTVHIDVPKSVRDVLIPALIVQPLVE 545 Query: 463 NAIVHGIQPCKGKGVVTIS-----VAEC-----GNRVRIAVRDTG--HGIDPKVIERVEA 510 NA+ HGIQP G V I+ +C +R+ V +TG G P R Sbjct: 546 NAVKHGIQPSASGGHVRITAWIEEACDCREQSIPSRLHFQVWNTGGERGSAPNEDGR--- 602 Query: 511 NEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIP 551 G +GL ++ R+ L Y E + E GT + IP Sbjct: 603 ----GTGLGLSSIRQRLALHYSERATMDVKSSAEQGTAVNILIP 642 >UniRef50_UPI0001BCDC23 histidine kinase internal region n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCDC23 Length = 580 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 71/207 (34%), Positives = 120/207 (57%), Gaps = 16/207 (7%) Query: 359 AELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKK 418 +ELR L+S+ NPHFLFN L I +L PD A ++I LS LRY+I+ + +++ + + Sbjct: 366 SELRQLESQFNPHFLFNTLENIKFMTKLEPDAAVRMITALSALLRYSIDNR-VQRVPLAE 424 Query: 419 ELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGV 477 ++ +++YI I++ RFG +L IDEE NC +P LL+QP+VENA+ +G +G Sbjct: 425 DIRHLENYIEIQRQRFGARLDYRQCIDEEAKNCLVPKLLLQPVVENAVHYGAD-AEGNIR 483 Query: 478 VTISVAECGNRVRIAVRDTGHGIDPK-------VIERVEANEMPGNKIGLLNVHHRVKLL 530 + V+ +++ I ++D G G+ + ++ER E N + G+ N+H R++LL Sbjct: 484 ICTHVSIADDQLCIVIKDAGPGMGAETLCHLRTMMERRENNSV---HTGIYNIHRRIQLL 540 Query: 531 YGEGLHIRRLEP---GTEIAFYIPNQR 554 YG ++ P GT + +P +R Sbjct: 541 YGSAYGVQISTPKGGGTLVEMVLPVKR 567 >UniRef50_A8RNT0 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RNT0_9CLOT Length = 565 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 77/254 (30%), Positives = 135/254 (53%), Gaps = 16/254 (6%) Query: 307 EKGVVTGTLKIYYCHA-HQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQ 365 EKG + +L+I +I S M + +++ E+++ L A ++ L+ Sbjct: 316 EKGDLDVSLEITSGDEFERIGHSFNTMIGSIRHLLARHQELAKENML------ATVQILE 369 Query: 366 SKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKD 425 S+ NPHFLFN L +I I+ P A +++ +LSR LRY+I+ D + +K+E+ I Sbjct: 370 SQFNPHFLFNTLESIRYMIKFGPGEAEKMLVSLSRMLRYSIQNGKD-VVTVKEEMDFISR 428 Query: 426 YIAIEQARFGDKLTVIYDIDE-EVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAE 484 Y+ + R+GD+L D++E N IP + +QP+VEN+I +G + + IS Sbjct: 429 YLQVMLYRYGDRLRYSIDLEEGSRNASIPRMALQPIVENSIKYGFGEDRDCLEIRISTRI 488 Query: 485 CGNRVRIAVRDTGHGIDPKVIERVEANEMPG----NKIGLLNVHHRVKLLYGEGLHI--- 537 + + + D G GI +++E+++AN G + IG+ NVH R++L+YG G + Sbjct: 489 QNEVLSVIISDDGVGISTELLEKLKANLDQGQNQTDHIGIYNVHKRIRLVYGSGYGVGID 548 Query: 538 RRLEPGTEIAFYIP 551 +E GT + +P Sbjct: 549 SEMEKGTVVTLRVP 562 >UniRef50_B5JKP7 Histidine kinase family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JKP7_9BACT Length = 442 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 70/209 (33%), Positives = 115/209 (55%), Gaps = 14/209 (6%) Query: 349 AEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIEL 408 A L + A L+ALQ ++NPHFLFNA+++IS+ + + D A ++ LS LR ++ Sbjct: 243 ALDLERRLSDARLQALQMQLNPHFLFNAMHSISALMHRDVDAADSMLARLSELLRLTLKS 302 Query: 409 KDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDE-EVNCCIPSLLIQPLVENAIVH 467 + I + +EL ++ Y+ IE+ RFGD+LT+ +ID +PSL++QP+VENA+ H Sbjct: 303 DGSQTIPLSQELQILQAYLDIERIRFGDRLTIDLEIDPATTQIQVPSLILQPVVENALRH 362 Query: 468 GIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRV 527 GI P G +TI+ + + + + V D G G+ P+ I+ IG+ N R+ Sbjct: 363 GIAPHARPGQLTITSSATADTLTLTVTDNGGGL-PETIK---------EGIGISNTRTRL 412 Query: 528 KLLYG--EGLHIRRLEP-GTEIAFYIPNQ 553 + LY + ++ P GT +P Q Sbjct: 413 EELYANHQTFTLQNTTPTGTRAQITLPTQ 441 >UniRef50_UPI0001788BFD signal transduction histidine kinase, LytS n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788BFD Length = 979 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 115/212 (54%), Gaps = 10/212 (4%) Query: 349 AEQLREMANKA---ELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYN 405 AEQ ++ KA E+ LQ++I PHFL+NAL+ I + + + A L+ LS +LRY Sbjct: 763 AEQTKQSMLKAIEYEMAFLQTQIKPHFLYNALSNIIAFCYTDGERAAYLLTMLSSFLRYI 822 Query: 406 IELKDDEQID-IKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV---NCCIPSLLIQPLV 461 E D Q ++KEL I+ Y+ +E+ARFG++LT YDID + + IPSLL+QPLV Sbjct: 823 FETSRDGQFSTLQKELEIIEAYVEVEKARFGERLTFAYDIDPSIVAEHVRIPSLLLQPLV 882 Query: 462 ENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLL 521 ENAI HG+ +G G V ++++ + + I V D G G+ ++ IG Sbjct: 883 ENAIRHGLFDKEGPGHVQVTISLHASCLNIRVADDGVGMSAAQCAQLMGGTAANAGIGFT 942 Query: 522 NVHHRVKLLYGEGLHIRRLEP--GTEIAFYIP 551 NV RV L L + P GT I IP Sbjct: 943 NVRRRVHDLTQGSLELHS-SPGNGTTIQITIP 973 >UniRef50_UPI0001C36B1D histidine kinase n=2 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36B1D Length = 585 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 95/298 (31%), Positives = 154/298 (51%), Gaps = 34/298 (11%) Query: 279 NYGKIIIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQ 338 ++G+ I E H+ E ++ +IPL++ T L + + Q +++Q + Q Sbjct: 286 SFGRRIAVIRGEMHKISE-GNLDIIPLFDG---TDELGLLFRDMQQTINNIQNLN---RQ 338 Query: 339 IISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAI--SSSIRLNPDTARQLIF 396 + QL+ R + M E + L ++INPHFLFN L I ++S +PDTA +I Sbjct: 339 LYENQLDRQRLMNQQRMI---EFQMLANQINPHFLFNTLETIRMNASTHKDPDTA-YIIT 394 Query: 397 NLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLT----VIYDIDEEVNCCI 452 L + +RY+++ KD + + + +EL + Y+ I+ R+ +K++ V +I ++ + Sbjct: 395 QLGKMMRYSLQTKD-QLVSLAQELAYTRSYLEIQHFRYREKISYEILVSDEITQDTYYLM 453 Query: 453 PSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVI----ERV 508 P LLIQPLVENAI HGI P G G + I + + + I + D G G+D + E V Sbjct: 454 P-LLIQPLVENAISHGISPMDGPGFLLIHIEPVKDYLSIVIHDNGVGMDEGALQALRESV 512 Query: 509 EANE-------MPGNK-IGLLNVHHRVKLLYGE--GLHIR-RLEPGTEIAFYIPNQRT 555 EA E +P + IGL NV R++L YG G+ I R GT + +P RT Sbjct: 513 EAPEPEYTEDPVPTERHIGLRNVSSRIRLFYGREYGVDIESRPMEGTAVTLRLPLPRT 570 >UniRef50_C6PMK7 Putative sensor with HAMP domain n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PMK7_9CLOT Length = 495 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 124/206 (60%), Gaps = 14/206 (6%) Query: 358 KAELRALQSKINPHFLFNALNAIS-SSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDI 416 +++L+ LQS+INPHFLFN LN I+ ++IR N LI ++S LRY++ + D + Sbjct: 284 QSKLKVLQSQINPHFLFNTLNCINQTAIRENALQTESLITSVSGILRYSLRMMD-RNASM 342 Query: 417 KKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGK 475 ++E+ +K Y+ I+Q RF D++ + +++ +P + +QP VENA +HGI+P + Sbjct: 343 EEEVTVVKQYMFIQQLRFEDRIKFNLHVRGDLSKVLVPGMTLQPFVENAFIHGIEPKEEG 402 Query: 476 GVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN----EMPGNK--IGLLNVHHRVKL 529 GV+ I + E G+ + + DTG GID K + ++ + E G+ +G+ +V R++L Sbjct: 403 GVINIDILEQGDVCTVLIEDTGCGIDEKTLNKIISGDVGLEHTGHTTGMGIRSVVQRLEL 462 Query: 530 LYGEGLHIRRLEP----GTEIAFYIP 551 +YG+ +I R+E GT++ IP Sbjct: 463 IYGQK-NIFRIESKKDFGTKVYLKIP 487 >UniRef50_C6J4K8 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J4K8_9BACL Length = 590 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 82/248 (33%), Positives = 133/248 (53%), Gaps = 28/248 (11%) Query: 327 SSLQEMAVGLSQIISTQLEVSRAEQLREMAN-------KAELRALQSKINPHFLFNALNA 379 SS QE+ + + S VSR E+L E AEL ALQS++NPHFL+N L+ Sbjct: 339 SSYQEINI---LVASFNRMVSRIEELIERVKISSVSEKNAELHALQSQVNPHFLYNTLDM 395 Query: 380 ISSSI-RLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 I + D +L+ +LS RY+ E KD ++ +++EL QI Y+ I R +L Sbjct: 396 IYWMLDEKENDRLGELVLSLSSMFRYSSEWKDGAKVTLREELEQINHYLTIILIRLEGRL 455 Query: 439 TVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTG 497 V IDE ++ +P + +QP++ENA+ +G++ K +GV+ + E G+ ++I V D G Sbjct: 456 RVEKSIDERWLDIRLPKMTVQPIIENAVKYGLESLKRQGVLKLYTQEVGDVLKIVVEDNG 515 Query: 498 HGIDPK-----------VIERVEANEMPGNKIGLLNVHHRVKLLYGE--GLHIRRL-EPG 543 +G+ + I +V G IGL N+H R++ ++GE GL I + + G Sbjct: 516 NGMTAERLAWLKQSINCPIPKVSGTGSSG--IGLQNLHRRLQHMFGERYGLEIESIPDQG 573 Query: 544 TEIAFYIP 551 T++A +P Sbjct: 574 TKVAVVLP 581 >UniRef50_Q01UY7 Signal transduction histidine kinase, LytS n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01UY7_SOLUE Length = 348 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 65/186 (34%), Positives = 108/186 (58%), Gaps = 13/186 (6%) Query: 349 AEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIEL 408 A + +A AEL AL+ +INPHFLFN+L++I++ + AR++ LS +LR ++ L Sbjct: 142 AVEAHALARDAELYALRMQINPHFLFNSLHSIAALTTQDAVRAREMCLRLSEFLRSSLGL 201 Query: 409 KDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVH 467 D E I +++EL + Y+ +E RFGD+L V +I + C IP+L++QPL+ENA+ H Sbjct: 202 GDREDIPLREELALARSYLDVEHVRFGDRLVVREEIQDACQECSIPALILQPLMENAVKH 261 Query: 468 GIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKV-IERVEANEMPGNKIGLLNVHHR 526 G+ ++ ++V G V IAV + DP ++R+ +GL +V R Sbjct: 262 GVAGLVEGSIIRLAVIRVGAEVHIAVEN---AFDPDASVDRL--------GVGLAHVRRR 310 Query: 527 VKLLYG 532 +++ YG Sbjct: 311 LQVRYG 316 >UniRef50_Q2N6R8 Two-component signal transduction histidine kinase n=7 Tax=Sphingomonadales RepID=Q2N6R8_ERYLH Length = 405 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 65/195 (33%), Positives = 107/195 (54%), Gaps = 6/195 (3%) Query: 345 EVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRL-NPDTARQLIFNLSRYLR 403 + R E+L A A+L L+ ++NPHFLFN LN+IS+ + L + A ++ LS +LR Sbjct: 148 QADRLERLELQATSAQLAMLRYQLNPHFLFNTLNSISTLVLLKQTEPANAMLTRLSGFLR 207 Query: 404 YNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDI-DEEVNCCIPSLLIQPLVE 462 + + + ++ + +E+ +K Y+ IE+ RF ++L +D+ D +PSLL+QPLVE Sbjct: 208 HTLITEPGGKVTVAQEVETLKLYLDIERMRFEERLRTEFDVSDAAAKAMLPSLLLQPLVE 267 Query: 463 NAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPG----NKI 518 NAI + + P + +T++ G R+R+ V DTG G+ M G + Sbjct: 268 NAIKYAVSPQEEGARITLAAQLVGERLRVVVSDTGPGLQRPETRASLPLAMTGAYTSTGV 327 Query: 519 GLLNVHHRVKLLYGE 533 GL N+ R+ YGE Sbjct: 328 GLANIRDRLAQAYGE 342 >UniRef50_Q9K691 Two-component sensor histidine kinase n=1 Tax=Bacillus halodurans RepID=Q9K691_BACHD Length = 481 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 81/249 (32%), Positives = 129/249 (51%), Gaps = 33/249 (13%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQL-REMANKAELRALQSKINPHFLFNALNAI--S 381 +T + +M +S ++ E SR QL +EM ELR+LQS+INPHFLFN LN I Sbjct: 236 LTETFNDMRQNISGLVKEMEETSRLNQLLKEM----ELRSLQSQINPHFLFNTLNVILKM 291 Query: 382 SSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVI 441 S I T + LI ++S LRYN+ D + E +++Y I +ARFGD +++ Sbjct: 292 SYIEQAEKTGK-LIASVSSLLRYNLG-SLDRTTTVADEANMLQEYFHILKARFGDWISLS 349 Query: 442 YDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGI 500 ++D+E IP L +QPLVENA +HG++ + + +++ + G+ + I++ D G G+ Sbjct: 350 LNVDDEARPYLIPCLTLQPLVENAFIHGVEQMESGAAIDVTIQKVGDSLTISISDNGAGM 409 Query: 501 D---------PKVIERVEANEMPGNK--IGLLNVHHRVKLLY------------GEGLHI 537 D K ++ E G+ IG+ NV R+++ Y GEG + Sbjct: 410 DEATRKELLSSKEEDQTEKRASGGHSTGIGMRNVMRRLEIFYQKTELLTIESSLGEGTTV 469 Query: 538 RRLEPGTEI 546 L P E+ Sbjct: 470 SLLLPTKEV 478 >UniRef50_A4XMX5 Integral membrane sensor signal transduction histidine kinase n=2 Tax=Clostridia RepID=A4XMX5_CALS8 Length = 613 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 79/238 (33%), Positives = 127/238 (53%), Gaps = 12/238 (5%) Query: 324 QITSSLQEMAVGLSQIISTQL--EVSRAEQLREMANKAELRALQSKINPHFLFNALNAIS 381 + M + L ++I ++ E+ R + L +AEL ALQS+INPHFLFN L++I Sbjct: 368 NVIKEFNNMTIKLKELIEKEMLSEIQR-KTLEIEKKQAELNALQSQINPHFLFNTLDSIR 426 Query: 382 -SSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTV 440 S+ N ++I L+R LR I +D +++E+ ++D++ I++ R G+KL Sbjct: 427 MRSVLKNELETAEIIKYLTRTLRRLIYWGND-ITTVEEEIGFVEDFLKIQKYRLGEKLAY 485 Query: 441 IYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHG 499 +DE NC IP + IQPLVENA +HGI+ +G G + I V + + I V D G G Sbjct: 486 RIYVDEVARNCLIPKMTIQPLVENACIHGIEEIEGNGEIIIEVKKEEAYLIIKVEDNGIG 545 Query: 500 IDPKVIERVE---ANEMPGNKIGLLNVHHRVKLLYGEGLHIR---RLEPGTEIAFYIP 551 +D + + ++ +N IGL NV+ R+ L Y + + + GT + IP Sbjct: 546 MDEEKLSQLYENLSNNTYEKNIGLKNVYKRLMLYYNNAVDFKIHSNFKQGTRVVIKIP 603 >UniRef50_Q47XT4 Sensor histidine kinase n=2 Tax=Alteromonadales RepID=Q47XT4_COLP3 Length = 392 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 68/198 (34%), Positives = 117/198 (59%), Gaps = 16/198 (8%) Query: 347 SRAEQLREM-----ANKAELRALQSKINPHFLFNALNAISSSIRLN-PDTARQLIFNLSR 400 ++ EQL+ + A A+++ L+ ++NPHFL N LNAI+S I P+ A+ + LS+ Sbjct: 161 AKTEQLKRLSAQTVARDAKIKMLRYQLNPHFLCNTLNAINSLIECELPEKAQLMTVQLSK 220 Query: 401 YLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCC-IPSLLIQP 459 +LRY+++ D +I ++ EL ++ Y+ IE+ RFG++L + + I E IPSLL+QP Sbjct: 221 FLRYSLDNDPDTKIALEFELKALELYLEIEKTRFGERLQLDFQISEAAKAAFIPSLLLQP 280 Query: 460 LVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMP---GN 516 L+EN++ H I + GV+++S N + + + DTG +RV+ N++ G Sbjct: 281 LIENSMKHVIAQNEEGGVISLSADVIDNMLVLELSDTGSA------KRVDINKIKSKTGR 334 Query: 517 KIGLLNVHHRVKLLYGEG 534 +GL N+ R+K LY + Sbjct: 335 GVGLRNIDERLKALYTDN 352 >UniRef50_UPI0001973889 signal transduction histidine kinase, LytS n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973889 Length = 347 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 78/240 (32%), Positives = 125/240 (52%), Gaps = 31/240 (12%) Query: 342 TQLEVSRAEQLREMANKAELR----------ALQSKINPHFLFNALNAISSSIRLNP-DT 390 T E E+L EM + A+L ALQ++INPHFL+N L +I S ++ + Sbjct: 94 THAEAMLVERLGEMLDSAKLLKLNKRQAQYLALQNQINPHFLYNTLESIRSEALISGLAS 153 Query: 391 ARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIY-----DID 445 + L+ + RY I K + + +++EL + Y I+Q RFG +L++ D D Sbjct: 154 VADMTEALAAFFRYTIS-KVENLVSVEEELQNCETYFRIQQYRFGPRLSLSVICDPDDRD 212 Query: 446 EEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVI 505 E C +P L +QP++EN+I+HG + G G +TI + G R+ I + D G G+D K + Sbjct: 213 EIYRCRLPKLTMQPILENSIIHGTELKLGSGKLTIRLERSGTRLLITISDDGVGMDEKAL 272 Query: 506 ER-----------VEANEMPGNKIGLLNVHHRVKLLYGE--GLHIRRLEP-GTEIAFYIP 551 R V + E I L+NV++R+ LL+GE GLH+ + GT++ +P Sbjct: 273 ARMNERLEKSGKEVASGEASKGGIALVNVNNRIHLLFGEEYGLHVFSMPGVGTDVEISLP 332 >UniRef50_A0Z2C0 Sensor histidine kinase n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z2C0_9GAMM Length = 394 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 106/184 (57%), Gaps = 9/184 (4%) Query: 359 AELRALQSKINPHFLFNALNAISSSIRLN-PDTARQLIFNLSRYLRYNIELKDDEQIDIK 417 A+L+ L+ ++NPHFLFN LN+++S + + A+ ++ L +LRY+++ +D I + Sbjct: 188 AQLQLLRYQLNPHFLFNTLNSVASLVSAERTEDAKTMLSRLGDFLRYSLDAGEDMLIPLD 247 Query: 418 KELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKG 476 KE + + Y+ IEQ RF D++T+ D+ + + +P++L+QPL ENAI + I P + G Sbjct: 248 KEFWALSQYLMIEQVRFSDRMTLKLDVPANLESLLVPNMLLQPLAENAIKYAIAPSESGG 307 Query: 477 VVTISVAECGNRVRIAVRDTGH---GIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGE 533 + +S +R+ ++V D+G G+ +E E+ G IGL N R+K L+ Sbjct: 308 TIRVSAQLKDSRLVLSVEDSGSERLGVSSDTLELSES----GAGIGLRNTRERLKNLFSN 363 Query: 534 GLHI 537 + Sbjct: 364 DFEL 367 >UniRef50_UPI000178A843 multi-sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A843 Length = 610 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 72/215 (33%), Positives = 118/215 (54%), Gaps = 17/215 (7%) Query: 353 REMANKAELRALQSKINPHFLFNALNAISSSIRLNP-DTARQLIFNLSRYLRYNIELKDD 411 +E K EL ALQ++INPHFL+N LN++ + ++ + +I +LS+ R ++ K Sbjct: 384 QESKRKYELEALQAQINPHFLYNTLNSVVRMVGMSKKEEVITMITSLSKLFRLSLS-KGK 442 Query: 412 EQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQ 470 I +++EL + Y+ I+Q R+ K + DE ++C L++QPL+ENAIVHGI+ Sbjct: 443 TSISVREELEHARHYLTIQQMRYKQKFDFAIEADEAALSCYTLKLVLQPLIENAIVHGIE 502 Query: 471 PCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV-EANEMP----------GNKIG 519 +G + I A G + + V D G G+ P+++E + +A E P G+ + Sbjct: 503 YMVDQGHIRIGAAVKGEWLEMTVTDNGVGMTPEMVEGILDAKETPHNPVQFINTAGSGVA 562 Query: 520 LLNVHHRVKLLYGE--GLHIR-RLEPGTEIAFYIP 551 + NVH R++L YG+ GL E GT + IP Sbjct: 563 VRNVHDRIRLYYGKRYGLEFESEQEAGTTVRIRIP 597 >UniRef50_A4XHB7 Histidine kinase internal region n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XHB7_CALS8 Length = 610 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 75/192 (39%), Positives = 119/192 (61%), Gaps = 16/192 (8%) Query: 358 KAELRALQSKINPHFLFNALNAISSSIRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDI 416 +AE++ALQS++NPHFLFN L +I+ +LN ++ LSR L N LK+++ + + Sbjct: 389 EAEIKALQSQLNPHFLFNILESINWLAQLNGVSQISDVVIALSRLLEVN--LKEEKFLPL 446 Query: 417 KKELYQIKDYIAIEQARFGDK-LTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKG 474 ++EL I YI+I + FG++ L + D D++ + IP LLIQPLVEN++ HGI+P KG Sbjct: 447 EEELKYITSYISILKINFGEENLKLEIDADKKALKFRIPKLLIQPLVENSVFHGIRP-KG 505 Query: 475 KGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVE---ANEMPGN-------KIGLLNVH 524 +G + I ++ I V+D G G++P+ + ++ ANE+ + +IGLLNV Sbjct: 506 RGKIFIGCYVFDEKLNIIVKDDGIGMNPEKLNKIRDGLANELEFDQEEKSYTRIGLLNVV 565 Query: 525 HRVKLLYGEGLH 536 R+KL+YG H Sbjct: 566 KRLKLIYGSNAH 577 >UniRef50_B2UAV4 Integral membrane sensor signal transduction histidine kinase n=9 Tax=cellular organisms RepID=B2UAV4_RALPJ Length = 422 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 82/254 (32%), Positives = 132/254 (51%), Gaps = 27/254 (10%) Query: 318 YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNAL 377 YY + ++LQ A L+ E+ + +A+L ALQ++I PHFLFN+L Sbjct: 156 YYYWSRGKLAALQRQAA---------LDALEREEAEKQVVRAQLMALQAQIEPHFLFNSL 206 Query: 378 NAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDK 437 + I +P AR+L+ +L +LR ++ EQ + +E ++ Y+ I+ RFG++ Sbjct: 207 AHVDVLIARDPAAARRLLQHLIGFLRSSLSHARAEQCTLAQEFALLRAYLDIQALRFGNR 266 Query: 438 LTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTIS----VAECGNRVRIA 492 L +++ + N IP +LIQPLVENA+VHGI+P + G + +S + G R+ + Sbjct: 267 LRFSLALNDAIANIVIPPMLIQPLVENAVVHGIEPAREGGEIALSARLAASSEGERLVLE 326 Query: 493 VRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLY-GEG-LHIRRLEP-GTEIAFY 549 VRDTG G + G+ +GL +V R+ L+ G+ L I P G I Sbjct: 327 VRDTGVGFG--------NDGAKGSGLGLTHVRERLSRLFDGDARLTITETVPHGVTIIVE 378 Query: 550 IP--NQRTPVASQA 561 +P ++ PV SQA Sbjct: 379 LPLVHETAPVPSQA 392 >UniRef50_UPI000178A0E3 integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A0E3 Length = 609 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 78/241 (32%), Positives = 133/241 (55%), Gaps = 24/241 (9%) Query: 312 TGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPH 371 T + + C +++ + ++MA +I TQ + +E ++ +AE ALQS+INPH Sbjct: 350 TNEVGMLACDINRVINEREQMA---RDMIKTQARLYESELSQK---QAEFAALQSQINPH 403 Query: 372 FLFNALNAISS-SIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIE 430 FL+N LN ISS + Q+ +S+ RY+I + D+ + I++EL I+ Y+ I Sbjct: 404 FLYNTLNCISSIGLEYGSREIAQIASCMSKIFRYSI--RKDDLVRIREELDCIQAYMNII 461 Query: 431 QARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCK--GKGVVTISVAECGN 487 R+ +K + D+DE + P +++QP+VENA+ HG++ G+ VT S+ G+ Sbjct: 462 AIRYENKFIIEIDVDEGLLEMQTPKMILQPIVENAVYHGLERMDQGGRLQVTGSIDAHGD 521 Query: 488 RVRIAVRDTGHGIDPKVIERVEA-----------NEMPGNKIGLLNVHHRVKLLYGEGLH 536 V + DTG G+DP+ + ++A + P IGL N+H+R++LL+GEG Sbjct: 522 -VCFQITDTGKGMDPEQLASLQAKLGMASPEPAPDGQPATSIGLSNIHNRLRLLFGEGYG 580 Query: 537 I 537 I Sbjct: 581 I 581 >UniRef50_Q5WAT9 Sensor protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WAT9_BACSK Length = 610 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 119/210 (56%), Gaps = 15/210 (7%) Query: 350 EQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELK 409 EQLR E LQ++I PHFLFNALNA+++ D L+ S +LR + + Sbjct: 406 EQLR-----LEAAWLQAQIQPHFLFNALNAVAALSETALDKMHDLLQEFSDFLRAKFQFQ 460 Query: 410 D-DEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHG 468 + DE + I++EL ++ Y+ IE+ RF ++L + + + E+ + +P L IQPLVENAI HG Sbjct: 461 NMDELVPIEEELSLVRSYLYIEKVRFEERLEIDWQV-EDSDIKVPFLSIQPLVENAIRHG 519 Query: 469 IQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP----KVIERVEANEMPGNKIGLLNVH 524 I G V I V+ ++V D G G+D +++ER A+ + +GL+N Sbjct: 520 IMKRPHGGKVLIQVSNNKTHAVVSVEDDGVGMDDVQQQRILERKAASR---SGVGLINTD 576 Query: 525 HRVKLLYGEGLHIRRLE-PGTEIAFYIPNQ 553 R+K +G GL I + GT+I+F++ ++ Sbjct: 577 QRLKRHFGTGLQIESEKGKGTKISFHVKHR 606 >UniRef50_C1I2X2 Multi-sensor signal transduction histidine kinase n=2 Tax=Clostridiales RepID=C1I2X2_9CLOT Length = 597 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 91/264 (34%), Positives = 142/264 (53%), Gaps = 33/264 (12%) Query: 306 WEKGVV------TGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKA 359 +E GVV +G+ +I + I S +++M + + I++ Q E K+ Sbjct: 337 FENGVVNLNISESGSYEIQHL-GKAIKSMVKQMNMLMENIMNEQ----------EAKRKS 385 Query: 360 ELRALQSKINPHFLFNALNAISSSIR-LNPDTARQLIFNLSRYLRYNIELKDDEQIDIKK 418 EL ALQ++INPHFL+N L++I I N D A ++ L+R+ R ++ K I +K Sbjct: 386 ELNALQAQINPHFLYNTLDSIIWMIENENYDGAIVMVTALARFFRISLS-KGKNVITVKD 444 Query: 419 ELYQIKDYIAIEQARFGDKLTVIYDI--DEEV-NCCIPSLLIQPLVENAIVHGIQPCKGK 475 EL + Y+ I+ R+ +K T YDI +EEV N L+IQPL+ENAI HG++ G Sbjct: 445 ELEHARYYLTIQNIRYKNKFT--YDIKAEEEVLNLTSIKLIIQPLIENAIYHGMEYMSGD 502 Query: 476 GVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANE----MPGNKIGLLNVHHRVKLLY 531 G + + + + I + D G G+ +V +++ NE G+ IGL NVH R+KL + Sbjct: 503 GDILVQAYLKNDELYIDIIDNGLGMPQEVADKLLTNENGVQKKGSGIGLRNVHERIKLYF 562 Query: 532 GE--GLHIRRLEP--GTEIAFYIP 551 G+ GL I EP GT I ++P Sbjct: 563 GDSYGLEIYS-EPDEGTTIRIHMP 585 >UniRef50_C6CVX1 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVX1_PAESJ Length = 600 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 74/209 (35%), Positives = 118/209 (56%), Gaps = 19/209 (9%) Query: 360 ELRALQSKINPHFLFNALNAISS-SIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKK 418 +L+ LQS+IN HFL+N L+AI S+ + I NL +Y RY + DE + ++K Sbjct: 384 QLKGLQSQINAHFLYNVLHAIRGMSMSNAKKEVAEAIDNLVQYFRYIVRY--DEYVLLRK 441 Query: 419 ELYQIKDYIAIEQARFGDKLTVIYDIDEEVNC-CIPSLLIQPLVENAIVHGIQPCKGKGV 477 EL ++ YIAI++ R+GD+L D+D +N I L++QPLVEN+++HG++ G+ + Sbjct: 442 ELEHLERYIAIQKIRYGDRLQFKVDMDPSLNSRSIVKLILQPLVENSLMHGLEDKNGRWI 501 Query: 478 VTISVAECGNRVRIAVRDTGHGIDPKVIE---------RVEANEMP---GNKIGLLNVHH 525 + I + +I+V D G G+ + +E RV + G IGL+N+H Sbjct: 502 IRIRAYAEDHAWKISVMDNGLGMTEEKLECLREEIAGIRVPPEKESAAIGQGIGLVNIHK 561 Query: 526 RVKLLYGE--GLHIRRLE-PGTEIAFYIP 551 R+++ YGE GL +R E GT + IP Sbjct: 562 RIQIYYGEPYGLSVRSWENKGTVVTITIP 590 >UniRef50_C0EIC1 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIC1_9CLOT Length = 488 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 73/241 (30%), Positives = 124/241 (51%), Gaps = 19/241 (7%) Query: 322 AHQITSSLQEMAVGLSQ-----IISTQLEVSRA-EQLREMANKAELRALQSKINPHFLFN 375 A +T + + +G+S +++ Q E A Q ++ + + + S+I PHFL+N Sbjct: 247 AQTLTRGISLINIGVSFSLLLILVNIQFEYEVALRQQEKVLTEQRIDIMLSQIQPHFLYN 306 Query: 376 ALNAISSSIRLNPDTARQLIFNLSRYLRYNIE-LKDDEQIDIKKELYQIKDYIAIEQARF 434 AL I+ R +P A + + +LR N++ L E I +EL +K+Y+ +EQ RF Sbjct: 307 ALGTIAELCRTDPKRAEKTTVEFANFLRGNMDSLNTREPIPFDQELSHVKNYLYVEQQRF 366 Query: 435 GDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVR 494 G++L V+YDI + + +P L +QPLVENA+ HGI + G++TIS E + + Sbjct: 367 GNRLRVVYDI-KTTDFFLPPLSLQPLVENAVRHGILKKREGGLITISTRETDEYAVVMIA 425 Query: 495 DTGHGIDPKVIERVEANEMPG----NKIGLLNVHHRVKLLYGEGLHIRRLEPGTEIAFYI 550 D G G++ +A + P IG+ NV R++ + + + + GT I I Sbjct: 426 DDGIGME-------KAKKFPNLGDHAHIGIQNVRSRIQTMMEGSMEVESSDQGTVITLQI 478 Query: 551 P 551 P Sbjct: 479 P 479 >UniRef50_D0I592 Autolysin sensor kinase n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I592_VIBHO Length = 339 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 62/192 (32%), Positives = 107/192 (55%), Gaps = 12/192 (6%) Query: 344 LEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLR 403 +++ +AEQ + + N ++LR+LQ ++ PHFLFN L +I I ++P A+ L+ ++ LR Sbjct: 134 VQIRQAEQEKALIN-SQLRSLQGQMEPHFLFNTLASIQVLIDIDPSKAKALLEKITDLLR 192 Query: 404 YNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN--CCIPSLLIQPLV 461 +++ + E I + EL + Y++I+Q R D++ ++D ++ IP LIQP V Sbjct: 193 ASLKQQRKETISLHDELKLLDSYLSIQQIRLSDRMGFDINVDPSLSKQTRIPPFLIQPAV 252 Query: 462 ENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLL 521 ENA+VHGI+P G + ++ + N + + V D G G + GN + + Sbjct: 253 ENAVVHGIEPSVKGGYIHVNFTKQENTITVEVSDNGIGFN---------ENSKGNGVSMK 303 Query: 522 NVHHRVKLLYGE 533 NV R+ LYGE Sbjct: 304 NVRERLSALYGE 315 >UniRef50_Q097A7 Two-component sensor histidine kinase n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q097A7_STIAU Length = 347 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 79/222 (35%), Positives = 117/222 (52%), Gaps = 10/222 (4%) Query: 348 RAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRL-NPDTARQLIFNLSRYLRYNI 406 RA +L +A+L ALQ ++ PHFLFNALNAI+ IR + A Q+ L+ LR + Sbjct: 127 RASELETQLVRAQLLALQMQLRPHFLFNALNAITGLIRTGDSKGAVQMTVGLADLLRAVL 186 Query: 407 ELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAI 465 D +++ + +EL + Y+ IEQ RF ++L +D + +P LL+QPLVENA+ Sbjct: 187 RGDDTQEVPLHQELDFVARYLRIEQLRFQERLHTQIRVDPSASDALVPHLLLQPLVENAV 246 Query: 466 VHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPG----NKIGLL 521 HG + + + V I + + + + VRDTG G +P E PG IGL Sbjct: 247 RHGAR-AEAQNRVDIHITRESDMLWLRVRDTGLGPNPPGGASPEPASEPGVPREGGIGLS 305 Query: 522 NVHHRVKLLYGEG--LHIRRLEPGTEIA-FYIPNQRTPVASQ 560 N R++ LYG+G L + E G +A IP +R A Q Sbjct: 306 NTRARLRHLYGDGHRLELLHAEGGGAVAQVAIPYRRAARAVQ 347 >UniRef50_UPI0001788A19 integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788A19 Length = 610 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 68/192 (35%), Positives = 111/192 (57%), Gaps = 18/192 (9%) Query: 358 KAELRALQSKINPHFLFNALNAISSSIR-LNPDTARQLIFNLSRYLRYNIELKDDEQIDI 416 +AEL ALQS+I PHF++N L +IS R N + ++ L R +R +E +D I + Sbjct: 392 EAELAALQSQIQPHFIYNTLESISMLARQRNNEDVSEMATALGRLIRSAVE-QDRSLIRL 450 Query: 417 KKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGK 475 +EL + YI I++ R G +L ++DI+E ++ C +P LL+QPL+ENAI+HGI + Sbjct: 451 GEELETAESYIRIQKMRHGSRLQAMFDIEEGLDDCLVPKLLLQPLIENAIMHGIGDREQG 510 Query: 476 GVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN-------------EMP--GNKIGL 520 G V ++VA + V + VRD G G+ + ++A+ MP G+ + L Sbjct: 511 GTVYVTVARFEDEVLLTVRDDGRGLSEDELAALQASLEEAGDDVAAKTPAMPLRGHGVAL 570 Query: 521 LNVHHRVKLLYG 532 N++ R++L+YG Sbjct: 571 KNINQRLRLIYG 582 >UniRef50_B8I617 Histidine kinase n=2 Tax=Clostridium RepID=B8I617_CLOCE Length = 612 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 80/223 (35%), Positives = 122/223 (54%), Gaps = 23/223 (10%) Query: 348 RAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQ-----LIFNLSRYL 402 + ++L N+A+ + L S+INPHFLFN L SIR+ Q +I L + + Sbjct: 378 QQQKLLTKQNEAQFKMLASQINPHFLFNTL----ESIRMKAFVCGQREIATVIKLLGKSM 433 Query: 403 RYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD----IDEEVNCCIPSLLIQ 458 R +EL D+ Q +K EL +++Y+ I++ RF +++ D IDE++ +P LLIQ Sbjct: 434 RSLLELDDNPQ-PLKSELDFVRNYLEIQKFRFAERVDYTIDVQDGIDEKILKVLP-LLIQ 491 Query: 459 PLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV-----EANEM 513 P+VENA VHG++ +G G + I V + + V+D G G++ + +E V E+ Sbjct: 492 PIVENAFVHGLEQKEGHGRIDIIVNRYNENIMVIVKDDGLGMEAEKLEEVHCKIKESGGK 551 Query: 514 PGNKIGLLNVHHRVKLLYGEGLHIR-RLEPGTEIAFYI--PNQ 553 G IGL NV+ R+KL YGE IR PGT +I P Q Sbjct: 552 TGKSIGLSNVNQRIKLYYGESYGIRVDSSPGTGTTVWISFPEQ 594 >UniRef50_B8KBX0 Two component sensor histidine kinase n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8KBX0_VIBPA Length = 345 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 74/203 (36%), Positives = 112/203 (55%), Gaps = 14/203 (6%) Query: 359 AELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKK 418 ++L+ LQS+I PHFLFN L +S I +P A+ ++ L+ LR ++ E ++ Sbjct: 151 SQLKQLQSQIEPHFLFNTLANVSVLIGQDPKQAQLMLERLTDLLRGTLKSSRQEYSSLQT 210 Query: 419 ELYQIKDYIAIEQARFGDKLTVIYD--IDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKG 476 EL + Y+AI+Q R G++L+ D I +EVN +P L+IQPLVENAI HGI+P G Sbjct: 211 ELEMVDAYLAIQQIRLGNRLSYSIDNPIQQEVN--LPPLVIQPLVENAIQHGIEPKVDGG 268 Query: 477 VVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLH 536 V ISV + + I V D+G G++ + + G+ +GL N R+K L+GE + Sbjct: 269 SVHISVQQSDCDLIIEVADSGVGMNSGLGQ-------AGHGVGLQNTRQRLKALFGEHAN 321 Query: 537 IRRLEP---GTEIAFYIPNQRTP 556 + LE G + IP P Sbjct: 322 LSLLESQSGGVKAKVSIPLNALP 344 >UniRef50_B1ZMA6 Signal transduction histidine kinase, LytS n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZMA6_OPITP Length = 366 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 86/242 (35%), Positives = 125/242 (51%), Gaps = 16/242 (6%) Query: 298 HSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAV-----GLSQIISTQLEVSRAEQL 352 +++ P W +G L+ +Y I AV GL + E +A QL Sbjct: 100 YTLWFEPTWPEGFWRMALQNFY--GRNIIDMTYYWAVIAFGYGLEYHQRYKDEELKASQL 157 Query: 353 REMANKAELRALQSKINPHFLFNALNAISSSIR-LNPDTARQLIFNLSRYLRYNIELKDD 411 + EL+AL+ +++PHFLFN LN I+ +R + A LI LS LR +++ + Sbjct: 158 ETRLVETELQALRQQLHPHFLFNTLNTIAVLVRERRSEDAVNLIARLSALLRLSLDQRGV 217 Query: 412 EQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCC-IPSLLIQPLVENAIVHGIQ 470 ++ +++EL I Y+ I++ RF D+LTV DI EV IP LL+QPLVENAIVHGI Sbjct: 218 AEVTLQQELEFIDHYVEIQKVRFSDRLTVQQDIAPEVRSARIPHLLLQPLVENAIVHGIA 277 Query: 471 PCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLL 530 P G G + I+ G + + VRD G G+ R+ A E +GL N R+ L Sbjct: 278 PKSGPGRLEIAARRSGADLLLEVRDDGPGLPDG---RMRAKE----GVGLCNTRERLARL 330 Query: 531 YG 532 YG Sbjct: 331 YG 332 >UniRef50_C5BLH4 Putative uncharacterized protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BLH4_TERTT Length = 362 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 75/214 (35%), Positives = 116/214 (54%), Gaps = 18/214 (8%) Query: 348 RAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIE 407 R +Q EM A ++ALQS+I PHFLFN++N+I+S I +P+ A +++ +LS+ R + Sbjct: 147 RNQQKAEMM--ARIQALQSRIRPHFLFNSMNSIASLIGFDPEAAERMVVDLSQLFRAS-- 202 Query: 408 LKDDEQIDIKKELYQIKDYIAIEQARFGDKLTV--IYDIDEEVNCC---------IPSLL 456 LK+ +++E+ + YI IEQ R G +L Y D + + IPS L Sbjct: 203 LKEAGLTPLREEIALCESYIGIEQIRMGARLQSEWRYWCDGQPSSLEETRMGLIIIPSFL 262 Query: 457 IQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGN 516 +QPLVENAI HGIQP G + +S+A RV I VR+ ++P + E GN Sbjct: 263 LQPLVENAIYHGIQPLPEGGRIEVSIALDKQRVEICVRNPVL-LNPSAGQAKSTAE--GN 319 Query: 517 KIGLLNVHHRVKLLYGEGLHIRRLEPGTEIAFYI 550 + L N+ HR+ Y + ++ +P E Y+ Sbjct: 320 GMALENIRHRLMAYYEKNAELKVEQPEGEYIIYL 353 >UniRef50_B7GJK8 Signal transduction histidine kinase n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GJK8_ANOFW Length = 479 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 76/215 (35%), Positives = 118/215 (54%), Gaps = 14/215 (6%) Query: 327 SSLQEMAVGLSQIISTQLEVSRAEQL-REMANKAELRALQSKINPHFLFNALNAISSSIR 385 + Q M L +IS +E+ E+L RE+ EL+ALQS+INPHFLFN LN IS Sbjct: 237 QTFQHMIENLRILISKNMEILEKEKLVREL----ELKALQSQINPHFLFNTLNVISKLAY 292 Query: 386 LN-PDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDI 444 + + +L + S LRYN+ K D+ + +++E+ K+Y AI++ARF D++T + Sbjct: 293 IEGAEQTSELTVSTSNLLRYNLR-KLDQPVTLREEVEHAKEYFAIQKARFRDRVTFEVKV 351 Query: 445 DEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPK 503 DE + IP L +QPL+ENA +HGI+ + + + + E N ++I + D G G+ Sbjct: 352 DESCLEQPIPCLTLQPLIENAFIHGIEGMEEGANIQLIIEEKRNCIQITIADNGVGMPYD 411 Query: 504 VIERVEANEMPGNK------IGLLNVHHRVKLLYG 532 V + K +GL NV R++L YG Sbjct: 412 VQRAIMDASYSLTKTGHSTGLGLENVLRRLQLFYG 446 >UniRef50_Q9K6Q0 Two-component sensor histidine kinase n=2 Tax=Bacillus RepID=Q9K6Q0_BACHD Length = 605 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 75/222 (33%), Positives = 117/222 (52%), Gaps = 17/222 (7%) Query: 357 NKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNI-ELKDDEQID 415 ++AEL+ALQS+INPHFLFN L A+ S+ + +++ L+ RY I ++K D+ + Sbjct: 379 SRAELKALQSQINPHFLFNTLEALYWSLEEKDEEQAEVVIALAELFRYTISDVKGDDWVA 438 Query: 416 IKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKG 474 + +E I+ Y+ I + R+ +L ++D + IP LLIQP+VENAI+HGI Sbjct: 439 LHEEFDHIERYLHIMKLRYDHRLAWEIELDPSLREVQIPKLLIQPVVENAIIHGIGNKVD 498 Query: 475 KGVVTISVAECGNR--VRIAVRDTGHGIDPKVIERVE-------ANEMPGNKIGLLNVHH 525 G V +S + V I VRD G G+D K +++E + + I L+N+ Sbjct: 499 GGKVQVSAYTSVKQGYVNITVRDDGQGMDEKTKQKLEHSLETRVGHPEKRSGIALVNIRQ 558 Query: 526 RVKLLYGEGLH-----IRRLEPGTEIAFYIPNQRTPVASQAT 562 R+ L Y H R GT + F IP + P + +AT Sbjct: 559 RLDLCYASDPHTSIELTSRHGVGTTVTFTIPKKEAP-SDEAT 599 >UniRef50_C1YG57 Putative regulator of cell autolysis n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YG57_NOCDA Length = 338 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 68/194 (35%), Positives = 113/194 (58%), Gaps = 6/194 (3%) Query: 364 LQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQI 423 L+++I+PHF+ NAL I++ +R +PD AR L+ + + YLRY K D + +EL Sbjct: 138 LRAQISPHFVHNALAVIAALVRTDPDRARHLLSDFADYLRYGFSEKGDYAT-LSEELEAT 196 Query: 424 KDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISV 482 + Y+ +++ARF D+L + + EV IP L++QP+VENAI HG++ +G+G +++S Sbjct: 197 QTYLELQRARFHDRLDITVRMAPEVLPVAIPFLVVQPIVENAIRHGLERKEGRGHISVSG 256 Query: 483 AECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNK-IGLLNVHHRVKLLYGE--GLHIRR 539 G I + D G G+ P + + A P ++ +GL NV R++ +YG GL I Sbjct: 257 FGEGPLCVIEIEDDGVGMHPDLARSLLAGTGPESRSVGLANVDQRLRAVYGPEYGLVIET 316 Query: 540 -LEPGTEIAFYIPN 552 L GT++ +P Sbjct: 317 ALGEGTKVTVRVPR 330 >UniRef50_C9AYH0 Histidine kinase n=5 Tax=Enterococcus RepID=C9AYH0_ENTCA Length = 539 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 76/245 (31%), Positives = 139/245 (56%), Gaps = 22/245 (8%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 +TSSL MA L+++ LE + +Q ++E+R LQ++I PHF++N+L+AI S I Sbjct: 296 LTSSLNRMADDLTRL----LEENALKQYH--LAQSEVRVLQAQITPHFIYNSLDAIVSLI 349 Query: 385 RL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 + A ++ + LS + R ++ K + I ++KEL + DY+ I Q R+G L+ Y Sbjct: 350 EAARYEQATEMTYALSDFFRISLS-KGQDWIPLEKELRHVDDYLKILQIRYGRMLS--YT 406 Query: 444 IDEEV---NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGI 500 I+++ + +++QPLVENA+ HG + + G++ I+V+E +++++ + D G GI Sbjct: 407 IEDQTVSPELQVLKMVLQPLVENAVYHGTKFVRRVGMIRITVSELPHQIQMTISDNGVGI 466 Query: 501 DPKVIERVEAN----EMPGNK--IGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIP 551 DP+ ++ + N P ++ GL NV+ R++L YG + + + GT I +P Sbjct: 467 DPERLQEIRRNLKETTDPASESGYGLYNVYRRLQLNYGSEAQLTIHSQYQEGTTINVTVP 526 Query: 552 NQRTP 556 + P Sbjct: 527 KREEP 531 >UniRef50_C5RDS9 Putative sensor with HAMP domain n=1 Tax=Clostridium cellulovorans 743B RepID=C5RDS9_CLOCL Length = 591 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 78/209 (37%), Positives = 119/209 (56%), Gaps = 18/209 (8%) Query: 340 ISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLS 399 I+T L+ + +++++ E++ LQS+INPHF+ N L+ +I+ DT R I N+S Sbjct: 368 ITTLLQDIKTQEMKKRL--LEIKTLQSQINPHFVSNTLH----TIKWLSDTQR--IDNIS 419 Query: 400 RYLRYNIEL------KDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCI 452 IEL K +E I I++E IK YI IEQ ++ D L V++ + +E+ + I Sbjct: 420 NLTNSIIELLNVSMGKTNEFITIEEEFQYIKHYINIEQYKYYDNLNVVFKLSDEIMHYKI 479 Query: 453 PSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN- 511 P LL+QP+VENAI+HGI + G+V + + + I V DTG G+D I+++ N Sbjct: 480 PKLLLQPIVENAIIHGIDQAEKDGIVLLQGFLKDDLIYITVEDTGVGMDQSTIDKLLHNT 539 Query: 512 EMPG--NKIGLLNVHHRVKLLYGEGLHIR 538 E G N IGL N+ R+KL YG I Sbjct: 540 EHKGRLNSIGLKNIDDRLKLYYGNDYGIN 568 >UniRef50_UPI0001789617 integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789617 Length = 574 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 70/223 (31%), Positives = 129/223 (57%), Gaps = 15/223 (6%) Query: 322 AHQITSSLQEMAVGLSQIISTQLE--VSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 +H + ++ + +STQ++ + + E + +AEL+AL ++INPHF++N+L + Sbjct: 329 SHNVAEDETDLLIDGFNRMSTQIQELIGQVETEQARKKEAELQALVAQINPHFIYNSLES 388 Query: 380 ISSSIRL--NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDK 437 I+S L N D ++ ++ +L + LR +I + E I + EL ++ Y+ I++ RF +K Sbjct: 389 INSMAVLQGNKDISK-MVISLGKLLRISIS-EHHELIPLSMELEHVQHYMRIQKFRFEEK 446 Query: 438 LTVIYDIDEEVNCCIPS-LLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 ++ E+ + L++QP+VENA+ HGI+P + G+++I V+E G + I V D Sbjct: 447 FDYGIELPNELRHYVTQKLIVQPIVENALYHGIEPMEESGLISIKVSENGEDIVIDVEDN 506 Query: 497 GHGIDPKVIERVEANEMPG-------NKIGLLNVHHRVKLLYG 532 G G DP+ + ++ N PG N +GL NVH R+++ +G Sbjct: 507 GPGFDPETLMKL-WNSDPGQLKKYRENGVGLKNVHERLRIRFG 548 >UniRef50_A9KS48 Signal transduction histidine kinase, LytS n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KS48_CLOPH Length = 506 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 72/192 (37%), Positives = 104/192 (54%), Gaps = 6/192 (3%) Query: 348 RAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIE 407 +E LR AE+ LQS+INPHFL+N L +I ++ +T I L N+ Sbjct: 290 ESEVLRNQRKNAEITMLQSQINPHFLYNTLESIQWMAKIQKNTGIVKITRCLISLLRNMA 349 Query: 408 LKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNC-CIPSLLIQPLVENAIV 466 E+I + +EL + DY+ ++ R+ D V+ +I E + I IQPLVENAI Sbjct: 350 KSVGEKISLGEELALLNDYVELQSIRYMDAFEVVNNIPESFHSYAIIKFSIQPLVENAIF 409 Query: 467 HGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP----KVIERVEANEMPG-NKIGLL 521 HG+ P G +TI+ E GN + I V D G G++P K+ +R+E+ G IGL Sbjct: 410 HGVVPSGKNGTITINAIEDGNDLLITVTDDGIGMEPPELRKLSDRMESTSSKGLTGIGLS 469 Query: 522 NVHHRVKLLYGE 533 NV++R KL YGE Sbjct: 470 NVNNRYKLSYGE 481 >UniRef50_C5EHM0 Histidine kinase internal region n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHM0_9FIRM Length = 605 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 73/210 (34%), Positives = 122/210 (58%), Gaps = 17/210 (8%) Query: 359 AELRALQSKINPHFLFNALNAISSSI--RLNPDTARQLIFNLSRYLRYNIELKDDEQIDI 416 AE++ALQ++INPHFL+N L++++ + R D + +I +L +RY IE ++ + + Sbjct: 395 AEVQALQAQINPHFLYNTLDSVNWMLIDREEYDIS-DIIISLGSLMRYCIE-DENAFVPL 452 Query: 417 KKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNC-CIPSLLIQPLVENAIVHGIQPCKGK 475 +E+ + Y+ I++ R DKL +D+ + +P L++QP+VENAI HGI+P K K Sbjct: 453 DREVEYVISYLKIQKNRLEDKLEYQVQVDDRLRQEKVPKLILQPMVENAITHGIEPRKQK 512 Query: 476 GVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPG------NKIGLLNVHHRVKL 529 G V+I + + G+ + + V D G G+ P+ + ++ E+P IGL NV R++L Sbjct: 513 GKVSILIRDAGDEILVTVEDDGIGMTPEQLNHLK-EELPDLEKEGHTGIGLRNVDRRIRL 571 Query: 530 LYGEGLHIRRLE----PGTEIAFYIPNQRT 555 YGE I R+E GT I IP + + Sbjct: 572 HYGEQYRI-RIESVYGKGTSIHLRIPKENS 600 >UniRef50_C6Y3D0 Histidine kinase internal region n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6Y3D0_PEDHD Length = 350 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 72/206 (34%), Positives = 111/206 (53%), Gaps = 7/206 (3%) Query: 348 RAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIE 407 R ++LRE+A K E+ AL+++I PHFLFN LN+IS+S+ + +R LI L+ RY ++ Sbjct: 149 REQELRELAFKGEINALKAQIQPHFLFNTLNSISASLPGEQEHSRVLIARLADTFRYALQ 208 Query: 408 LKDDEQIDIKKELYQIKDYIAIEQARFGDKLTV-IYDIDEEVNCCIPSLLIQPLVENAIV 466 + + + +EL + Y+++EQ RFG +L I + IP +L+QP VENAI Sbjct: 209 STQQDLVPLSQELDFMHTYLSLEQGRFGKRLAFSIEGTEGTAEILIPPMLLQPFVENAIK 268 Query: 467 HGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHR 526 HGI+P G V IS +V I + +TG P V + G +G+ N R Sbjct: 269 HGIEPSIEGGSVIISCIRESKKVGIYIENTG---SPYVGN--PEDLFLGKGVGVKNTAKR 323 Query: 527 VKLLYGEGLHIR-RLEPGTEIAFYIP 551 ++ + E L + + G I F IP Sbjct: 324 LENQFAEKLQVSINDKGGLRIHFCIP 349 >UniRef50_Q1GUM3 Signal transduction histidine kinase, LytS n=1 Tax=Sphingopyxis alaskensis RepID=Q1GUM3_SPHAL Length = 390 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 70/188 (37%), Positives = 111/188 (59%), Gaps = 12/188 (6%) Query: 348 RAEQLREMANKAELRALQSKINPHFLFNALNAISSSI-RLNPDTARQLIFNLSRYLRYNI 406 RA R A A+LRAL ++NPHFLFN LN++S+ + + + A +I NLS +LR ++ Sbjct: 184 RANHFRMEAKNAQLRALHYQVNPHFLFNTLNSLSTLVLKGSKSEAETMIMNLSSFLRSSL 243 Query: 407 ELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTV-IYDIDEEVNCCIPSLLIQPLVENAI 465 + ++ + + +E+ + Y+ IEQARF D+L V + DE + C+P L++QP++ENAI Sbjct: 244 AVDPEQLVSLDEEIALQRLYLDIEQARFPDRLQVEVLMPDELKHACVPVLILQPIIENAI 303 Query: 466 VHGIQPCKGKGVVTI-SVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVH 524 +G+ P KGK + + + AE G + V + IDP+ V A+ G +GL NV Sbjct: 304 KYGVSPSKGKIAIRLHASAEYG----LLVLRIENDIDPRA--PVPAS---GTGLGLGNVR 354 Query: 525 HRVKLLYG 532 R+ YG Sbjct: 355 ERLLTRYG 362 >UniRef50_A4XMI4 Signal transduction histidine kinase, LytS n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMI4_CALS8 Length = 584 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 75/233 (32%), Positives = 127/233 (54%), Gaps = 7/233 (3%) Query: 308 KGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANK-AELRALQS 366 K V G+LK+ + + E+ Q+I+ E+ E+A K AE+ L Sbjct: 328 KKVKDGSLKVEKVIERK--DEIGELINNFYQMINRINELVIKVYEEEIARKNAEINLLYM 385 Query: 367 KINPHFLFNALNAISSSIRLNPDTARQLI-FNLSRYLRYNIELKDDEQIDIKKELYQIKD 425 ++NPHFL+N L+ I++ LN + L+ +L+++LR N+ L + + +++E+ +K Sbjct: 386 QLNPHFLYNTLDTINALAELNRNKDISLLAVSLAKFLRMNMSL-NKSLVTVEQEIEHVKY 444 Query: 426 YIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAE 484 Y+ I + RF DKL ++DEE+N +P LI P VEN+IVHG + K + I V E Sbjct: 445 YLTIMKIRFNDKLDYKIEVDEELNKILVPKHLILPFVENSIVHGFENKKENARIVIKVEE 504 Query: 485 CGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI 537 R+RI + D G GI P+ +E ++ + + IG+ NV R+++ Y E + Sbjct: 505 HNERIRIEIIDNGKGIQPQKLEDIKRH-LQKESIGIHNVLKRLEIFYKENYYF 556 >UniRef50_C9L4P8 Putative two-component sensor histidine kinase n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L4P8_RUMHA Length = 620 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 84/221 (38%), Positives = 126/221 (57%), Gaps = 15/221 (6%) Query: 343 QLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAIS--SSIRLNPDTARQLIFNLSR 400 QL E RE N E++ LQ++INPHFL+N L++I + I+ N + ++ LS Sbjct: 400 QLLKKNVEDEREKKN-LEIKMLQAQINPHFLYNTLDSIRWIAVIQKNASIVK-MVTALSS 457 Query: 401 YLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE--VNCCIPSLLIQ 458 L+ N+ +E++ +++EL ++DYI IE+ R+ + V ++EE N I L +Q Sbjct: 458 LLK-NMAKGFNEKVTLREELNFLQDYIIIEKMRYMEMFDVEIHVEEESLYNARIVKLTLQ 516 Query: 459 PLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV-EANEMPGNK 517 PLVENAI GI+P G+++I V N + I+VRD G GI + IE++ + E N Sbjct: 517 PLVENAIFSGIEPMGENGIISIHVKALENTLCISVRDNGVGIPEEKIEKILKGKEKSKND 576 Query: 518 ----IGLLNVHHRVKLLYGE--GLHIR-RLEPGTEIAFYIP 551 IGL NV R+KL+YGE GL I ++ TEI IP Sbjct: 577 TMSGIGLPNVDQRIKLVYGEEYGLSIESKVGEYTEIQVRIP 617 >UniRef50_C5ENT9 Signal transduction histidine kinase n=2 Tax=Clostridiales RepID=C5ENT9_9FIRM Length = 334 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 83/279 (29%), Positives = 143/279 (51%), Gaps = 32/279 (11%) Query: 295 PEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLRE 354 P +H + L+ G T L + C T + +M + +I+ + +E L+ Sbjct: 51 PYLHMERTMRLFLDGYTTADLT-HLCQTAP-TPMVYQMLAHMMKIMDS------SELLKL 102 Query: 355 MANKAELRALQSKINPHFLFNALNAISSSIRLNPDTA-RQLIFNLSRYLRYNIELKDDEQ 413 +A+ ALQ++INPHFL+N L +I S + T + L+ + RY I K + Sbjct: 103 NKRQAQYLALQNQINPHFLYNTLESIRSEALIAGLTGVADMTEALAAFFRYTIS-KVENL 161 Query: 414 IDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-----VNCCIPSLLIQPLVENAIVHG 468 + +++EL + Y I+Q RFG +L++ + D E C +P L +QP++EN+I+HG Sbjct: 162 VSVEEELENCQTYFRIQQYRFGSRLSLTIECDPEEREEIYGCRLPKLTMQPILENSIIHG 221 Query: 469 IQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV-------------EANEMPG 515 + G G +TI + G R+ I + D G G+D +V+ R+ + +E G Sbjct: 222 TECKIGTGHLTIHLERSGKRLLIRISDDGVGMDEEVLSRMNERLGRSGQAFASQGSETRG 281 Query: 516 NKIGLLNVHHRVKLLYGE--GLHIRRLEP-GTEIAFYIP 551 I L+NV++R+ LL+GE GLH+ + GT++ +P Sbjct: 282 G-IALVNVNNRIHLLFGEEYGLHVFSMPGVGTDVEINLP 319 >UniRef50_D1Y5U2 Histidine kinase n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y5U2_9BACT Length = 440 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 83/280 (29%), Positives = 150/280 (53%), Gaps = 22/280 (7%) Query: 284 IIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQ 343 ++N++E R+ I +P+ ++ + L+I + QI L E+ + +I+ Sbjct: 168 FVRNDEE--RSFLIEKYRQLPILDETELKRALEIMRLLSTQIVE-LCEINLARQKILEQS 224 Query: 344 LEVSRAEQ----LREMANKAELRALQSKINPHFLFNALNAISS-SIRLNPDTARQLIFNL 398 L +S+ Q + ++A+L+AL+++INPHFLFN+LN I+ ++ ++ L Sbjct: 225 LLLSQQRQRGADMEHALHRAQLKALRNQINPHFLFNSLNCIARLALFEAAKKTMEMTEQL 284 Query: 399 SRYLRYNIELKDDEQ-IDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLL 456 + YLRY ++ + + + +EL ++ Y+AI + RFGD+L+ + D EV C +P +L Sbjct: 285 ADYLRYTLQEQSEHGLVCFGEELQCVRSYLAIYRVRFGDRLSFSVEEDPEVRECLVPFML 344 Query: 457 IQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGN 516 +QPLVENA++HG++P KG + ++ + N + I ++D G G + + R Sbjct: 345 LQPLVENALIHGLEPSLRKGKLLLAARKERNSLHIVLKDNGVGFE---MNRFREG----- 396 Query: 517 KIGLLNVHHRVKLLYGEGLHIR-RLEP--GTEIAFYIPNQ 553 +GL NV R+ L Y + I R P GT I +P + Sbjct: 397 -MGLANVRKRLHLYYEKSASIEVRSIPRGGTRIELRLPER 435 >UniRef50_Q2BFM1 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BFM1_9BACI Length = 588 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 79/244 (32%), Positives = 132/244 (54%), Gaps = 22/244 (9%) Query: 324 QITSSLQEMAVGLSQIIST--QLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAIS 381 ++ S +M ++ +IS Q +++ E A+LRAL+++INPHFL+N L+AI+ Sbjct: 348 RVGDSFNKMMNKINNLISDIYQKDINEKE--------AQLRALRAQINPHFLYNTLDAIN 399 Query: 382 SSIRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTV 440 + + D ++ LSR L+ +I + E I +++E I DY+ I++ RF DK+ Sbjct: 400 WMAQFDKTDEVSKMTIALSRLLKSSIS-NNKEFIRLEEEAKYIDDYMTIQKIRFQDKIHY 458 Query: 441 IYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHG 499 IDE NC +P L++QP+VENA++HG++ G + I + + I + D G G Sbjct: 459 SMQIDEAAKNCLVPKLILQPIVENAMIHGLEKKLENGYLLIKGYVKNDLLHIQIIDNGVG 518 Query: 500 IDPKVIE------RVEANEMPGNKIGLLNVHHRVKLLYGE--GLHIRRLEP-GTEIAFYI 550 +D + + V +E G G+LNV +R+KLL+G GL+I E G+ + Sbjct: 519 MDERTMSALLKGVYVNRDENKGTGNGILNVQNRIKLLFGREYGLNIDSNENVGSVFELTL 578 Query: 551 PNQR 554 P R Sbjct: 579 PVHR 582 >UniRef50_C0D790 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D790_9CLOT Length = 339 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 118/209 (56%), Gaps = 22/209 (10%) Query: 346 VSRAEQLREMANKAELRALQSKINPHFLFNALNAI-SSSIRLNPDTARQLIFNLSRYLRY 404 + R+ + +AE ALQ++INPHFL+N L I S ++ D+ ++ L+ + RY Sbjct: 107 IDRSNLVNVSKKQAEYLALQNQINPHFLYNTLEGIRSEALIAGLDSVAEMTEALATFFRY 166 Query: 405 NIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL--TVIYDIDEE------VNCCIPSLL 456 I + + + ++ EL I++Y I+Q RFGDKL ++ YD DE+ + +P L Sbjct: 167 TIS-QVENLVPLEDELANIENYYYIQQFRFGDKLALSIEYDCDEDASELDILQYRLPKLT 225 Query: 457 IQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTG--------HGIDPKV---- 504 +QP+VEN+I HGI+ GKG +TI + +R+RI V D G H ++ K+ Sbjct: 226 LQPIVENSIYHGIERKIGKGHLTIRIGASDSRLRIRVSDDGLGMAEDKLHQLNEKLKSLF 285 Query: 505 IERVEANEMPGNKIGLLNVHHRVKLLYGE 533 ++ VE I ++NV++R+KLL+GE Sbjct: 286 LDAVEGESSRQGGIAMVNVNNRIKLLFGE 314 >UniRef50_UPI0001787F84 integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787F84 Length = 598 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 72/224 (32%), Positives = 127/224 (56%), Gaps = 10/224 (4%) Query: 336 LSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAIS-SSIRLNPDTARQL 394 +++ + +E + +LRE + E+ AL ++NPHFL+N LN I+ ++ + ++ Sbjct: 374 MNEKVRQLIEENYVAKLRE--RETEILALGIQLNPHFLYNTLNIINWMAVYGEKEQVSRM 431 Query: 395 IFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIP 453 + +LSR L Y + + D + + +++ ++DYI I RF + V +DI+ E + +P Sbjct: 432 LVSLSRMLHYTTDNRKD-SMPLSEDIGWLQDYIVIMSNRFEHRFRVDFDIEPELMKARVP 490 Query: 454 SLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEM 513 L +QPLVENAI+HG + + G++TI G+ + V D G G +P+ ++ EA Sbjct: 491 KLFLQPLVENAIIHGFRDMESGGLITIYGRSLGDDIEFCVEDNGCGFEPERLK--EALAE 548 Query: 514 PGNKIGLLNVHHRVKLLYGE--GLHIRRL-EPGTEIAFYIPNQR 554 + IG+ NV R+KLLYG+ G+ I + E GT + IP+ + Sbjct: 549 NASHIGIHNVDKRIKLLYGDRYGIGIESVPELGTRVKLVIPHHK 592 >UniRef50_C5EHD7 Sensor histidine kinase n=3 Tax=Clostridiales RepID=C5EHD7_9FIRM Length = 469 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 63/195 (32%), Positives = 114/195 (58%), Gaps = 7/195 (3%) Query: 346 VSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRL-NPDTARQLIFNLSRYLRY 404 ++ ++ + + L+ L+++INPHFLFN LN I+S+ ++ + DT ++I L R RY Sbjct: 247 LTEKHEMEKQLDAVRLQMLKNQINPHFLFNTLNMIASTAQIEDADTTEKMITALGRLFRY 306 Query: 405 NIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDID-EEVNCCIPSLLIQPLVEN 463 N++ D + +++EL I+DY+ +++ RFG +LT D + + +PS +QPLVEN Sbjct: 307 NLK-SSDSVMPLERELKIIQDYMYLQKMRFGQRLTFTCDCHPDTLELLVPSFALQPLVEN 365 Query: 464 AIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNK----IG 519 +I +GI P G + I G R+ I+V DTG G++ ++ + G++ +G Sbjct: 366 SIKYGISPRSQGGKIHIRSWMEGRRLWISVADTGLGMEEGRLQEIREALRTGDEKAAGVG 425 Query: 520 LLNVHHRVKLLYGEG 534 L N++ R+ +Y +G Sbjct: 426 LGNIYRRLHGMYKDG 440 >UniRef50_O31516 Sensor histidine kinase yesM n=2 Tax=Bacillus subtilis group RepID=YESM_BACSU Length = 577 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 72/200 (36%), Positives = 111/200 (55%), Gaps = 11/200 (5%) Query: 357 NKAELRALQSKINPHFLFNALNAISSSIRLNPDTA-RQLIFNLSRYLRYNIELKDDEQID 415 + EL+ALQ++INPHFL+N L +I+ + N +++ +L LR +I +K D + Sbjct: 378 KETELKALQAQINPHFLYNTLESINWLAKANQQKQISKMVESLGFLLRNSIHMKKD-IVT 436 Query: 416 IKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKG 474 I++E ++ Y+ I++ RF ++L DID+EV +C IP L +QPL ENAI + ++P Sbjct: 437 IQEEADIVRHYMTIQRFRFEERLKFTLDIDDEVKHCLIPKLTLQPLAENAIQYALEPFTR 496 Query: 475 KGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGE- 533 + I + V I V D G G+D +++E G IGL N+ R+ L +GE Sbjct: 497 PCAIRIQAKKAKGCVCITVEDNGPGMDGRILEST-----GGRGIGLWNIRERISLTFGEP 551 Query: 534 -GLHIR-RLEPGTEIAFYIP 551 GL I E GT I IP Sbjct: 552 YGLRIHSEHEKGTRIVITIP 571 >UniRef50_C6CTF8 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF8_PAESJ Length = 595 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 77/240 (32%), Positives = 131/240 (54%), Gaps = 14/240 (5%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAE-QLREMANKAELRALQSKINPHFLFNALNAISS 382 Q++ M ++ ++ E ++ + QL N+ +L+ + S+INPHFLFNAL +I Sbjct: 351 QLSRQFNSMVSSINGLVEEVQESNKMKRQLEAKQNEIKLKMMASQINPHFLFNALESIRM 410 Query: 383 SIRLNPDTA-RQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVI 441 L + Q++ L + +R +IE+ + E+ ++ Y+ I++ R+ D+L+ Sbjct: 411 KAHLKGEKEISQVVRLLGKLMRRSIEVSQ-RLTPLADEMDIVRCYLDIQKFRYEDRLSYE 469 Query: 442 YDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGI 500 +D V IP L+IQPLVENA++HG + G+VT+ G+ VR+ V D G G+ Sbjct: 470 LHVDPVVERVSIPPLIIQPLVENAVIHGFENKVEGGMVTVRAVREGDYVRVDVIDNGAGM 529 Query: 501 DPKVIERV-----EANEMPGNKIGLLNVHHRVKLLYG--EGLHIRRLEP--GTEIAFYIP 551 + I+++ E + N+IGL NVH R++L YG GL EP GT+++F +P Sbjct: 530 TREKIDKLTQHLNETEDAENNRIGLRNVHLRLQLTYGPEHGLQYES-EPGIGTKVSFTLP 588 >UniRef50_Q2S054 Two-component signal transduction histidine kinase n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S054_SALRD Length = 369 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 116/210 (55%), Gaps = 14/210 (6%) Query: 347 SRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNI 406 RAE L +A L AL+ ++NPHFLFN L+A+S+ + +P R++I LS LR+ + Sbjct: 147 ERAEALEAQLTEARLEALRMQLNPHFLFNTLHAVSTLVDRDPAGVRRMIARLSELLRHVL 206 Query: 407 ELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAI 465 + + +++ + +EL + DY I+ RF +L D+ ++ + +P+L++QP+VENAI Sbjct: 207 DEEAPQEVPLSQELEFLDDYFEIQSIRFQGRLDTAVDVPSDLYDAQVPNLILQPIVENAI 266 Query: 466 VHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHH 525 HG +G G + + +R+ + V D G G+ P+ E + GL NV Sbjct: 267 KHGASQVRGVGRIEVRGRHEDDRLVLTVTDNGPGL-PESQE---------DGFGLRNVRA 316 Query: 526 RVKLLYGE--GLHIRRL-EPGTEIAFYIPN 552 R++ LYG+ LH+ + + GT +P+ Sbjct: 317 RLEGLYGDDQALHMETVPDGGTRAVLALPH 346 >UniRef50_C4ZBY3 Putative uncharacterized protein n=6 Tax=Clostridiales RepID=C4ZBY3_EUBR3 Length = 597 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 118/203 (58%), Gaps = 10/203 (4%) Query: 358 KAELRALQSKINPHFLFNALNAISSSIRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDI 416 K+EL LQS+INPHFL+N L++I+ I + A +I L++ R ++ K I + Sbjct: 378 KSELDVLQSQINPHFLYNTLDSITWMIEGGKNEEASFMITQLAKLFRISLS-KGHTIIPV 436 Query: 417 KKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGK 475 + EL K Y+ I++ R+ +K V +++DEE+ + C L++QP++ENA+ +GI+ Sbjct: 437 RDELLHAKSYMNIQKVRYKNKFEVSFEVDEEIMDYCAVKLVLQPILENALNYGIRELDDF 496 Query: 476 GVVTISVAECGNRVRIAVRDTGHGID----PKVIERVEANEMPGNKIGLLNVHHRVKLLY 531 G + + + G + I V D G GI P ++ + G+ +GL+NV++R+K+L+ Sbjct: 497 GEIVVGGQKVGEDIIITVSDNGMGIPENEIPFLLTNTDRVHKKGSGVGLVNVNNRIKILF 556 Query: 532 GE--GLHIR-RLEPGTEIAFYIP 551 GE GLHI L+ GT + IP Sbjct: 557 GERYGLHIESELDEGTVVTIKIP 579 >UniRef50_UPI0001788F16 integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788F16 Length = 580 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 78/241 (32%), Positives = 127/241 (52%), Gaps = 17/241 (7%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQLREMANK-AELRALQSKINPHFLFNALNAIS- 381 Q+T M + L +I+ ++ E+ + A+L ALQS+INPHFLFNAL I Sbjct: 341 QLTGEFNRMTLQLKSLINDVYVADIQKKNLELQRRHAQLNALQSQINPHFLFNALETIRM 400 Query: 382 SSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTV- 440 S+ + D ++I N+++ R ++ K D + +K+E+ I ++ I++ RFGDK+ Sbjct: 401 RSLMKDEDETARIIHNMAKIFRNSLVWKKD-MVTLKEEVEFIHCFLEIQRYRFGDKIDYS 459 Query: 441 IYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGI 500 ++ EE + IP + I VENA +HGI+P K G + + V G + ++D G G+ Sbjct: 460 VHAPAEEGHLQIPKMAIVTFVENASIHGIEPLKHGGRIEVRVVREGQSLFCTIQDNGAGM 519 Query: 501 DPKVIERV----EANEMPGNKIGLLNVHHRVKLLYGEGLHIRRLE------PGTEIAFYI 550 + +ER+ E + G +IG+ NV +R+KL YG R E GT + I Sbjct: 520 PAEKVERIYRYLETEDEMGERIGIQNVIYRLKLYYGSRF---RFEIDSSPGQGTRVKLSI 576 Query: 551 P 551 P Sbjct: 577 P 577 >UniRef50_C6J483 Multi-sensor signal transduction histidine kinase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J483_9BACL Length = 596 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 110/209 (52%), Gaps = 9/209 (4%) Query: 351 QLREMANKAELRALQSKINPHFLFNALNAISSSIRL-NPDTARQLIFNLSRYLRYNIELK 409 Q +E K+EL LQS+INPHFL+N LN+++ L + I +LSR+ R ++ K Sbjct: 375 QEQEAKRKSELDVLQSQINPHFLYNTLNSVTRLAELGRNEEVVTTITSLSRFFRISLS-K 433 Query: 410 DDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHG 468 I ++ EL ++ Y+ I+ RF +K DE + C L++QPLVENAI HG Sbjct: 434 GKHIISVQDELEHVRHYLIIQTIRFKNKFRYEIRADEAALKCSTLKLILQPLVENAIHHG 493 Query: 469 IQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEM---PGNKIGLLNVHH 525 I+ +G + I G + +RD G G+ P +E++ + + G+ +G+ NV Sbjct: 494 IEKSAEQGFIDIEARLEGENLIFRIRDNGIGMSPDTVEKLFSGNIRSESGSGVGVRNVQE 553 Query: 526 RVKLLYGE--GLHIR-RLEPGTEIAFYIP 551 R+ L YG GLH E GT + IP Sbjct: 554 RITLYYGPGYGLHFESEPEEGTTVTITIP 582 >UniRef50_C0DBS6 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DBS6_9CLOT Length = 605 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 77/210 (36%), Positives = 116/210 (55%), Gaps = 12/210 (5%) Query: 344 LEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISS---SIRLNPDTARQLIFNLSR 400 L+V +E+ R EL ALQS+INPHFL N L + S+ P+ A +++ NLS Sbjct: 368 LQVQLSER-RYKLKAMELMALQSQINPHFLMNTLQTVYWRCISLTQGPNPATEMLENLSE 426 Query: 401 YLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCC-IPSLLIQP 459 L Y++E E + +K+EL + Y+ I+ R+ ++ VI+D+ + +P L+IQP Sbjct: 427 ILHYSLE-SSQELVPLKEELNITRCYLDIQVQRYKNQFDVIWDVWAPMEAVMVPKLIIQP 485 Query: 460 LVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIE----RVEANE-MP 514 L+EN+I HGI+ G + I + V I V D G G+D + +E R+E + Sbjct: 486 LIENSIYHGIRDKAGHSTIKIKIDSRDGWVAITVLDNGLGMDRERLEQLKKRLEGEDTQE 545 Query: 515 GNKIGLLNVHHRVKLLYGEGLHIRRL-EPG 543 G IGLLN H R++L+YG IR L PG Sbjct: 546 GVHIGLLNTHKRLELIYGGDYKIRLLSRPG 575 >UniRef50_A5Z5R4 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z5R4_9FIRM Length = 586 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 74/208 (35%), Positives = 121/208 (58%), Gaps = 15/208 (7%) Query: 359 AELRALQSKINPHFLFNALNAISSSIRLNPDTA-RQLIFNLSRYLRYNIELKDDEQIDIK 417 AE++ALQS++NPHF+FN LN ++ ++ ++ Q+ + + ++ + I I Sbjct: 378 AEIKALQSQLNPHFIFNVLNTLAWKAEMSDNSELSQMAIAIGEIFKATTAYRNSQYISIA 437 Query: 418 KELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKG 476 +EL +K YI ++Q RF DK++V +DID+++ + IP +Q LVENA VHG++P G Sbjct: 438 EELKFVKFYIYLQQMRFEDKISVTFDIDKDLDDINIPCFCVQTLVENAYVHGLEPKDTNG 497 Query: 477 VVTISVAECGNR--VRIAVRDTGHGID--PK----VIERVEANEMPGNK--IGLLNVHHR 526 +TIS+ + + I + D G G + PK V + +E G++ IGL N++ R Sbjct: 498 HLTISIKKDNENKFLLINIIDDGVGFEKIPKFDINVASKGTTSEAVGSRPHIGLKNLNRR 557 Query: 527 VKLLYGEG--LHIRRL-EPGTEIAFYIP 551 + L+YGE LHI + E T I+F IP Sbjct: 558 LFLMYGEDAVLHIESIPEVRTAISFKIP 585 >UniRef50_Q01R05 Histidine kinase internal region n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01R05_SOLUE Length = 642 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 66/184 (35%), Positives = 99/184 (53%), Gaps = 18/184 (9%) Query: 352 LREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDD 411 L++ +AELRAL+++INPHFLFN+LN I+ + + A + L+ R+ + Sbjct: 446 LQQQVTEAELRALRAQINPHFLFNSLNTIADLVVRDATRAEAMTLRLAGVFRHVLANSSR 505 Query: 412 EQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQ 470 I+ E+ ++ Y+ IE+ RFGD+L V D+D E+ N IPSL++QPLVENA+ HG+ Sbjct: 506 PLTSIRDEIAFLRTYLYIEEVRFGDRLHVELDMDPEIANEDIPSLILQPLVENALKHGLS 565 Query: 471 PCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNK---IGLLNVHHRV 527 P G G + IS + + V D G G PG +GL N+ R+ Sbjct: 566 PRPGPGRLWISARAGKGEIVLRVEDDGIG--------------PGAAPAGVGLTNIAERL 611 Query: 528 KLLY 531 LY Sbjct: 612 ATLY 615 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AA94 Inner membrane protein ypdA n=114 Tax=Bacteria R... 748 0.0 UniRef50_Q2RH26 Histidine kinase internal region n=3 Tax=Bacteri... 616 e-175 UniRef50_Q39S58 Histidine kinase internal region n=4 Tax=Bacteri... 613 e-174 UniRef50_A1HTW6 Signal transduction histidine kinase, LytS n=2 T... 607 e-172 UniRef50_C5VR12 Sensor protein LytS n=1 Tax=Clostridium botulinu... 607 e-172 UniRef50_C9RCQ9 Signal transduction histidine kinase, LytS n=4 T... 604 e-171 UniRef50_C0ZI45 Two-component sensor histidine kinase n=1 Tax=Br... 586 e-166 UniRef50_A8MGZ4 Signal transduction histidine kinase, LytS n=1 T... 585 e-165 UniRef50_A1VG05 Signal transduction histidine kinase, LytS n=4 T... 582 e-164 UniRef50_UPI0001C42EFA two-component sensor histidine kinase n=1... 577 e-163 UniRef50_Q5WAM1 Two-component sensor histidine kinase n=1 Tax=Ba... 568 e-160 UniRef50_A1HSX0 Signal transduction histidine kinase, LytS n=1 T... 566 e-160 UniRef50_A0PY88 Two-component sensor kinase n=2 Tax=Clostridium ... 565 e-159 UniRef50_B8CWX8 Signal transduction histidine kinase, LytS n=1 T... 562 e-158 UniRef50_Q3AA02 Sensor histidine kinase n=1 Tax=Carboxydothermus... 559 e-158 UniRef50_A8VV76 Signal transduction histidine kinase, LytS n=3 T... 557 e-157 UniRef50_A6TN09 Signal transduction histidine kinase, LytS n=1 T... 549 e-155 UniRef50_Q4A009 Sensor protein lytS n=84 Tax=Bacilli RepID=LYTS_... 547 e-154 UniRef50_C0Z808 Two-component sensor histidine kinase n=1 Tax=Br... 544 e-153 UniRef50_B8DLB4 Signal transduction histidine kinase, LytS n=2 T... 537 e-151 UniRef50_A4J8Q8 Signal transduction histidine kinase, LytS n=1 T... 533 e-150 UniRef50_C5TXS9 Signal transduction histidine kinase, LytS n=2 T... 532 e-149 UniRef50_Q814J0 Sensor protein lytS n=83 Tax=Bacillaceae RepID=L... 530 e-149 UniRef50_C4XJP3 Sensor protein LytS n=1 Tax=Desulfovibrio magnet... 528 e-148 UniRef50_A1HLU7 Signal transduction histidine kinase, LytS n=1 T... 525 e-147 UniRef50_B1YHT0 Signal transduction histidine kinase, LytS n=1 T... 525 e-147 UniRef50_Q5HLG3 Sensor protein lytS n=5 Tax=Staphylococcus epide... 522 e-146 UniRef50_C5ETQ5 Signal transduction histidine kinase n=5 Tax=Clo... 515 e-144 UniRef50_A5VJZ2 Signal transduction histidine kinase, LytS n=13 ... 510 e-143 UniRef50_Q7P590 Autolysin sensor kinase n=10 Tax=Fusobacterium R... 509 e-143 UniRef50_C3WH60 Autolysin sensor kinase n=4 Tax=Fusobacterium Re... 506 e-142 UniRef50_Q3DHF4 Sensor histidine kinase n=10 Tax=Streptococcus a... 497 e-139 UniRef50_Q8E7H4 Sensor protein lytS n=10 Tax=Streptococcus RepID... 493 e-138 UniRef50_B1IFE5 Sensor histidine kinase n=13 Tax=Clostridium Rep... 492 e-137 UniRef50_C0ZBJ5 Two-component sensor histidine kinase n=2 Tax=Ba... 490 e-137 UniRef50_B4UL02 Signal transduction histidine kinase, LytS n=9 T... 481 e-134 UniRef50_Q8EQQ2 Sensor protein lytS n=1 Tax=Oceanobacillus iheye... 470 e-131 UniRef50_P0AD15 Inner membrane protein yehU n=287 Tax=root RepID... 464 e-129 UniRef50_B0G7P0 Putative uncharacterized protein n=2 Tax=Clostri... 461 e-128 UniRef50_C5CI42 Signal transduction histidine kinase, LytS n=1 T... 458 e-127 UniRef50_B7IG85 Regulator of cell autolysis n=1 Tax=Thermosipho ... 451 e-125 UniRef50_Q1QCQ6 Histidine kinase internal region n=1 Tax=Psychro... 445 e-123 UniRef50_A6LJ91 Signal transduction histidine kinase, LytS n=1 T... 444 e-123 UniRef50_A6F874 Putative uncharacterized protein n=2 Tax=Gammapr... 419 e-115 UniRef50_C9R972 Signal transduction histidine kinase, LytS n=1 T... 416 e-114 UniRef50_B0TBI2 Sensor protein lyts n=1 Tax=Heliobacterium modes... 412 e-113 UniRef50_C9LQU0 Sensor protein LytS n=1 Tax=Dialister invisus DS... 405 e-111 UniRef50_Q2RGH9 ATP-binding region, ATPase-like n=2 Tax=Clostrid... 386 e-105 UniRef50_C8VX85 Signal transduction histidine kinase, LytS n=1 T... 383 e-105 UniRef50_B8G277 Signal transduction histidine kinase, LytS n=2 T... 382 e-104 UniRef50_Q67QS2 Two-component sensor histidine kinase n=1 Tax=Sy... 379 e-103 UniRef50_Q3AEC2 Sensor histidine kinase n=2 Tax=Clostridia RepID... 370 e-101 UniRef50_C8WPP3 Signal transduction histidine kinase, LytS n=2 T... 353 1e-95 UniRef50_D0WHA5 Regulatory protein LytS n=2 Tax=Coriobacteriacea... 348 3e-94 UniRef50_C8W8F7 Signal transduction histidine kinase, LytS n=3 T... 347 6e-94 UniRef50_A4E9X1 Putative uncharacterized protein n=2 Tax=Collins... 336 1e-90 UniRef50_B6GAE7 Putative uncharacterized protein n=2 Tax=Collins... 330 1e-88 UniRef50_Q5YL06 Putative sensor protein n=1 Tax=Aeromonas hydrop... 328 3e-88 UniRef50_C6WDP3 Signal transduction histidine kinase, LytS n=2 T... 326 1e-87 UniRef50_UPI0001B586EC signal transduction histidine kinase, Lyt... 325 3e-87 UniRef50_D2B6F5 Signal transduction histidine kinase, LytS n=1 T... 322 2e-86 UniRef50_C4FAQ4 Putative uncharacterized protein n=1 Tax=Collins... 320 8e-86 UniRef50_A4E9W6 Putative uncharacterized protein n=1 Tax=Collins... 320 8e-86 UniRef50_A0JUQ0 Signal transduction histidine kinase, LytS n=8 T... 309 2e-82 UniRef50_A4F5Z4 Sensor kinase, two-component system n=24 Tax=Act... 295 2e-78 UniRef50_C9NAB2 Signal transduction histidine kinase, LytS n=6 T... 290 1e-76 UniRef50_C0BEZ4 Putative uncharacterized protein n=3 Tax=Clostri... 267 1e-69 UniRef50_Q65NG8 Putative uncharacterized protein n=2 Tax=Bacillu... 265 3e-69 UniRef50_A6BKJ8 Putative uncharacterized protein n=3 Tax=Firmicu... 264 6e-69 UniRef50_C5EHM0 Histidine kinase internal region n=1 Tax=Clostri... 262 3e-68 UniRef50_C6J483 Multi-sensor signal transduction histidine kinas... 261 4e-68 UniRef50_C6D7S5 Cache sensor signal transduction histidine kinas... 258 4e-67 UniRef50_A8RMQ3 Putative uncharacterized protein n=1 Tax=Clostri... 257 7e-67 UniRef50_O31516 Sensor histidine kinase yesM n=2 Tax=Bacillus su... 257 7e-67 UniRef50_C1I2X2 Multi-sensor signal transduction histidine kinas... 256 2e-66 UniRef50_Q893H6 Two-component sensor kinase yesM n=1 Tax=Clostri... 256 2e-66 UniRef50_UPI000178A843 multi-sensor signal transduction histidin... 256 2e-66 UniRef50_C5EKG5 Histidine kinase internal region n=1 Tax=Clostri... 255 3e-66 UniRef50_C7H1K0 Putative sensor histidine kinase n=1 Tax=Faecali... 255 3e-66 UniRef50_B8FU12 Signal transduction histidine kinase, LytS n=2 T... 254 6e-66 UniRef50_Q9KBL7 Two-component sensor histidine kinase n=1 Tax=Ba... 253 9e-66 UniRef50_C6D2L4 Cache sensor signal transduction histidine kinas... 252 2e-65 UniRef50_A6M1Q9 Multi-sensor signal transduction histidine kinas... 252 3e-65 UniRef50_C5EU49 Multi-sensor signal transduction histidine kinas... 251 4e-65 UniRef50_B0G4V0 Putative uncharacterized protein n=3 Tax=Clostri... 251 4e-65 UniRef50_UPI0001789966 multi-sensor signal transduction histidin... 251 5e-65 UniRef50_A8MKS8 Integral membrane sensor signal transduction his... 251 5e-65 UniRef50_D1PQX9 Putative sensor histidine kinase n=1 Tax=Subdoli... 251 5e-65 UniRef50_C6CTF8 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2... 251 7e-65 UniRef50_A9KK43 Histidine kinase internal region n=1 Tax=Clostri... 251 7e-65 UniRef50_C4IM92 Multi-sensor signal transduction histidine kinas... 250 1e-64 UniRef50_C6IZN7 Integral membrane sensor signal transduction his... 250 1e-64 UniRef50_Q9K6Q0 Two-component sensor histidine kinase n=2 Tax=Ba... 250 2e-64 UniRef50_A9KI48 Histidine kinase internal region n=1 Tax=Clostri... 249 2e-64 UniRef50_A8RW55 Putative uncharacterized protein n=1 Tax=Clostri... 249 2e-64 UniRef50_C4GDI5 Putative uncharacterized protein n=1 Tax=Shuttle... 249 2e-64 UniRef50_C6LLN0 Putative sensor histidine kinase n=1 Tax=Bryante... 249 2e-64 UniRef50_A1TDT4 Signal transduction histidine kinase, LytS n=9 T... 249 3e-64 UniRef50_C7H4I2 Periplasmic sensor signal transduction histidine... 248 3e-64 UniRef50_C8NE17 Sensor histidine kinase n=2 Tax=Granulicatella R... 248 3e-64 UniRef50_A8RNT0 Putative uncharacterized protein n=1 Tax=Clostri... 248 4e-64 UniRef50_C5RJU0 Cache sensor signal transduction histidine kinas... 248 4e-64 UniRef50_UPI0001788F16 integral membrane sensor signal transduct... 247 6e-64 UniRef50_UPI0001789617 integral membrane sensor signal transduct... 247 7e-64 UniRef50_Q9KB25 BH2110 protein n=2 Tax=Bacillus RepID=Q9KB25_BACHD 247 8e-64 UniRef50_C5RJF6 Histidine kinase n=1 Tax=Clostridium cellulovora... 247 9e-64 UniRef50_Q5WIY4 Two-component sensor histidine kinase n=1 Tax=Ba... 247 1e-63 UniRef50_B8I617 Histidine kinase n=2 Tax=Clostridium RepID=B8I61... 246 1e-63 UniRef50_Q1YRG0 Sensor histidine kinase n=1 Tax=gamma proteobact... 246 1e-63 UniRef50_D0MJT6 Signal transduction histidine kinase, LytS n=1 T... 246 1e-63 UniRef50_C6IY77 Integral membrane sensor signal transduction his... 246 1e-63 UniRef50_C6IXH6 Histidine kinase internal region n=2 Tax=Bacilla... 246 1e-63 UniRef50_C6IWB4 Histidine kinase internal region n=1 Tax=Paeniba... 246 2e-63 UniRef50_B1HZJ7 Sensor protein n=3 Tax=Bacillaceae RepID=B1HZJ7_... 246 2e-63 UniRef50_Q2BFM1 Putative uncharacterized protein n=1 Tax=Bacillu... 246 2e-63 UniRef50_A9AWB2 Histidine kinase internal region n=1 Tax=Herpeto... 246 2e-63 UniRef50_UPI00016C0712 two-component sensor histidine kinase n=1... 245 3e-63 UniRef50_C9L4P8 Putative two-component sensor histidine kinase n... 245 3e-63 UniRef50_A9U7N0 Predicted protein n=1 Tax=Physcomitrella patens ... 245 3e-63 UniRef50_B1R1H8 Two-component sensor histidine kinase YesM n=2 T... 245 3e-63 UniRef50_C5EQZ0 Putative uncharacterized protein n=1 Tax=Clostri... 245 4e-63 UniRef50_C0C1J1 Putative uncharacterized protein n=1 Tax=Clostri... 245 5e-63 UniRef50_Q1ILF7 Periplasmic sensor signal transduction histidine... 245 5e-63 UniRef50_B9MP60 Signal transduction histidine kinase, LytS n=2 T... 244 5e-63 UniRef50_B0NX84 Putative uncharacterized protein n=1 Tax=Clostri... 244 6e-63 UniRef50_C5EE53 Histidine kinase internal region n=1 Tax=Clostri... 244 8e-63 UniRef50_A9U6Q4 Predicted protein n=1 Tax=Physcomitrella patens ... 243 1e-62 UniRef50_C6CT14 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2... 243 1e-62 UniRef50_UPI0001B9ED30 integral membrane sensor hybrid histidine... 243 2e-62 UniRef50_A9KL84 Integral membrane sensor signal transduction his... 243 2e-62 UniRef50_B9MLE3 Putative sensor with HAMP domain n=1 Tax=Anaeroc... 242 2e-62 UniRef50_C6CT65 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2... 242 2e-62 UniRef50_C6LBC4 Sensor histidine kinase n=1 Tax=Bryantella forma... 242 2e-62 UniRef50_UPI0001788114 integral membrane sensor signal transduct... 242 2e-62 UniRef50_C5EWK9 Histidine kinase internal region n=1 Tax=Clostri... 242 3e-62 UniRef50_C6J594 Histidine kinase internal region n=2 Tax=Bacilla... 242 3e-62 UniRef50_C5EMP2 Signal transduction histidine kinase n=3 Tax=Clo... 242 3e-62 UniRef50_A6NTG2 Putative uncharacterized protein n=1 Tax=Bactero... 242 3e-62 UniRef50_Q182U1 Two-component sensor histidine kinase n=6 Tax=ce... 242 3e-62 UniRef50_C1F299 Regulator of cell autolysis n=1 Tax=Acidobacteri... 241 4e-62 UniRef50_A6TTD2 Histidine kinase internal region n=1 Tax=Alkalip... 241 4e-62 UniRef50_C5RQ55 Signal transduction histidine kinase, LytS n=2 T... 241 5e-62 UniRef50_C0Z9X4 Sensor protein n=2 Tax=Bacillales RepID=C0Z9X4_B... 241 5e-62 UniRef50_B8HZZ4 Putative sensor with HAMP domain n=2 Tax=Clostri... 241 5e-62 UniRef50_C2KZS6 Two-component sensor histidine kinase n=1 Tax=Or... 241 6e-62 UniRef50_Q1IJB8 Periplasmic sensor signal transduction histidine... 241 7e-62 UniRef50_C6JDI9 Histidine kinase n=1 Tax=Ruminococcus sp. 5_1_39... 240 9e-62 UniRef50_UPI0001788A19 integral membrane sensor signal transduct... 240 1e-61 UniRef50_B9Y3V6 Putative uncharacterized protein n=1 Tax=Holdema... 240 1e-61 UniRef50_UPI0001787F84 integral membrane sensor signal transduct... 240 1e-61 UniRef50_UPI0001C35C0F integral membrane sensor signal transduct... 240 1e-61 UniRef50_C6D6B6 Putative sensor with HAMP domain n=1 Tax=Paeniba... 240 1e-61 UniRef50_C4ZBY3 Putative uncharacterized protein n=6 Tax=Clostri... 240 1e-61 UniRef50_A8SSH4 Putative uncharacterized protein n=8 Tax=Clostri... 240 2e-61 UniRef50_C5EUN5 Histidine kinase internal region n=4 Tax=Clostri... 240 2e-61 UniRef50_C6D353 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2... 240 2e-61 UniRef50_C5EHR4 Histidine kinase internal region n=1 Tax=Clostri... 239 2e-61 UniRef50_UPI0001788487 integral membrane sensor signal transduct... 239 2e-61 UniRef50_C0D041 Putative uncharacterized protein n=1 Tax=Clostri... 239 2e-61 UniRef50_C8XT87 Putative periplasmic sensor signal transduction ... 239 3e-61 UniRef50_C6J4K8 Integral membrane sensor signal transduction his... 238 3e-61 UniRef50_C7GCG8 Putative two-component sensor histidine kinase n... 238 3e-61 UniRef50_B9Y686 Putative uncharacterized protein n=1 Tax=Holdema... 238 3e-61 UniRef50_A5ZVI8 Putative uncharacterized protein n=1 Tax=Ruminoc... 238 4e-61 UniRef50_C2L0L8 Possible two-component sensor kinase YesM n=1 Ta... 238 4e-61 UniRef50_C5RJD6 Sensor protein n=1 Tax=Clostridium cellulovorans... 238 4e-61 UniRef50_A7VVZ0 Putative uncharacterized protein n=1 Tax=Clostri... 238 4e-61 UniRef50_A8FI26 Sensor histidine kinase n=2 Tax=Bacillus pumilus... 238 5e-61 UniRef50_B0K3C6 Histidine kinase n=4 Tax=Thermoanaerobacter RepI... 238 5e-61 UniRef50_A4XJ72 Integral membrane sensor signal transduction his... 238 5e-61 UniRef50_UPI0001B9EDED integral membrane sensor signal transduct... 238 6e-61 UniRef50_A7VR10 Putative uncharacterized protein n=1 Tax=Clostri... 238 6e-61 UniRef50_A9QDR5 Putative sensor with HAMP domain n=1 Tax=Paeniba... 237 8e-61 UniRef50_D0MDS0 Signal transduction histidine kinase, LytS n=1 T... 237 1e-60 UniRef50_B7GJK8 Signal transduction histidine kinase n=1 Tax=Ano... 237 1e-60 UniRef50_C5RG15 Putative sensor with HAMP domain n=1 Tax=Clostri... 237 1e-60 UniRef50_Q1JFY4 Two-component sensor kinase yesM n=47 Tax=Strept... 236 1e-60 UniRef50_A4XMX5 Integral membrane sensor signal transduction his... 236 1e-60 UniRef50_C0Z9Z8 Sensor protein n=1 Tax=Brevibacillus brevis NBRC... 236 1e-60 UniRef50_B8I4I2 Putative sensor with HAMP domain n=2 Tax=Clostri... 236 1e-60 UniRef50_C6JC63 Two-component sensor kinase yesM n=1 Tax=Ruminoc... 236 1e-60 UniRef50_B8I0Y1 Putative sensor with HAMP domain n=1 Tax=Clostri... 236 2e-60 UniRef50_C4FYZ1 Putative uncharacterized protein n=1 Tax=Abiotro... 236 2e-60 UniRef50_C6LII7 Putative HAMP domain protein n=1 Tax=Bryantella ... 236 2e-60 UniRef50_Q21NI6 Histidine kinase internal region n=1 Tax=Sacchar... 236 2e-60 UniRef50_C6D150 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2... 236 2e-60 UniRef50_C6LL34 Putative two-component sensor kinase YesM n=1 Ta... 236 2e-60 UniRef50_C9RVZ4 Integral membrane sensor signal transduction his... 236 2e-60 UniRef50_C0C2A0 Putative uncharacterized protein n=1 Tax=Clostri... 235 2e-60 UniRef50_D2LUI0 Histidine kinase n=1 Tax=Bacillus cellulosilytic... 235 3e-60 UniRef50_C6CXU7 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2... 235 3e-60 UniRef50_C6D6I3 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2... 235 3e-60 UniRef50_UPI0001C36B1D histidine kinase n=2 Tax=Clostridium hath... 235 4e-60 UniRef50_C6D4D1 Putative sensor with HAMP domain n=1 Tax=Paeniba... 235 5e-60 UniRef50_A6LST6 Histidine kinase internal region n=4 Tax=Clostri... 235 5e-60 UniRef50_B8I426 Putative sensor with HAMP domain n=2 Tax=Clostri... 234 6e-60 UniRef50_A6M1T7 Histidine kinase internal region n=2 Tax=Clostri... 234 6e-60 UniRef50_A8S8Z5 Putative uncharacterized protein n=1 Tax=Faecali... 234 6e-60 UniRef50_C5EPK6 Predicted protein n=1 Tax=Clostridiales bacteriu... 234 6e-60 UniRef50_C6CWA9 Putative sensor with HAMP domain n=1 Tax=Paeniba... 234 7e-60 UniRef50_UPI0001850905 two-component sensor histidine kinase n=1... 234 8e-60 UniRef50_C7IMD1 Histidine kinase n=1 Tax=Clostridium papyrosolve... 234 8e-60 UniRef50_C6CWQ5 Putative sensor with HAMP domain n=1 Tax=Paeniba... 234 9e-60 UniRef50_UPI0001C36BEE signal transduction histidine kinase, Lyt... 233 1e-59 UniRef50_D0KBE3 Signal transduction histidine kinase, LytS n=7 T... 233 1e-59 UniRef50_A3DFT2 Signal transduction histidine kinase, LytS n=5 T... 233 1e-59 UniRef50_UPI000178A0E3 integral membrane sensor signal transduct... 233 1e-59 UniRef50_UPI0001C356D2 putative sensor with HAMP domain n=1 Tax=... 233 1e-59 UniRef50_B0K233 Integral membrane sensor signal transduction his... 233 1e-59 UniRef50_C4G6T4 Putative uncharacterized protein n=1 Tax=Abiotro... 233 1e-59 UniRef50_A9U6T1 Predicted protein (Fragment) n=1 Tax=Physcomitre... 233 1e-59 UniRef50_B8FP92 Sensor protein n=1 Tax=Desulfitobacterium hafnie... 233 1e-59 UniRef50_C6IXM7 Histidine kinase internal region n=2 Tax=Paeniba... 233 1e-59 UniRef50_C6CWF5 Putative sensor with HAMP domain n=1 Tax=Paeniba... 233 2e-59 UniRef50_C6CV50 Sensor protein n=1 Tax=Paenibacillus sp. JDR-2 R... 233 2e-59 UniRef50_C7II18 Putative sensor with HAMP domain n=1 Tax=Clostri... 233 2e-59 UniRef50_Q2RGN3 Histidine kinase n=1 Tax=Moorella thermoacetica ... 233 2e-59 UniRef50_C5EHK2 Putative uncharacterized protein n=2 Tax=Clostri... 233 2e-59 UniRef50_C6LB64 Putative HAMP domain protein n=1 Tax=Bryantella ... 233 2e-59 UniRef50_Q5WBZ1 Two-component sensor histidine kinase n=1 Tax=Ba... 232 2e-59 UniRef50_C0D790 Putative uncharacterized protein n=1 Tax=Clostri... 232 2e-59 UniRef50_Q2S4J4 Histidine kinase family n=1 Tax=Salinibacter rub... 232 3e-59 UniRef50_UPI0001788A7F integral membrane sensor signal transduct... 232 3e-59 UniRef50_C6CVD9 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2... 232 3e-59 UniRef50_C6CT82 Signal transduction histidine kinase, LytS n=1 T... 232 3e-59 UniRef50_C5ES67 Histidine kinase internal region n=3 Tax=Clostri... 232 3e-59 UniRef50_C0C5Z3 Putative uncharacterized protein n=1 Tax=Clostri... 232 4e-59 Sequences not found previously or not previously below threshold: UniRef50_A8F4Q3 Signal transduction histidine kinase, LytS n=1 T... 278 4e-73 UniRef50_C0BXS4 Putative uncharacterized protein n=2 Tax=Firmicu... 260 1e-67 UniRef50_C6J7M5 Histidine kinase internal region n=1 Tax=Paeniba... 249 3e-64 UniRef50_A4IPA9 Two-component sensor histidine kinase n=5 Tax=Ba... 247 8e-64 UniRef50_A9KIC4 Multi-sensor signal transduction histidine kinas... 247 8e-64 UniRef50_C6LHP8 Histidine kinase n=2 Tax=Lachnospiraceae RepID=C... 244 6e-63 UniRef50_A4XMF9 Integral membrane sensor signal transduction his... 241 4e-62 UniRef50_UPI0001C353EA YesM n=2 Tax=Clostridium hathewayi DSM 13... 240 8e-62 UniRef50_C6CV60 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2... 240 8e-62 UniRef50_C6CSY1 Histidine kinase n=2 Tax=Paenibacillus RepID=C6C... 240 1e-61 UniRef50_C6IY73 Two-component sensor histidine kinase n=3 Tax=Ba... 240 1e-61 UniRef50_A6M2F5 Integral membrane sensor signal transduction his... 239 2e-61 UniRef50_B6FKZ9 Putative uncharacterized protein n=1 Tax=Clostri... 236 1e-60 UniRef50_C5EPF7 Periplasmic sensor signal transduction histidine... 236 1e-60 UniRef50_C6IYJ6 Predicted protein n=1 Tax=Paenibacillus sp. oral... 236 2e-60 UniRef50_C6IVH0 Histidine kinase internal region n=2 Tax=Bacilla... 234 6e-60 UniRef50_B8I0K8 Histidine kinase n=2 Tax=Clostridium RepID=B8I0K... 234 7e-60 UniRef50_A4IP92 Two-component sensor histidine kinase n=5 Tax=Ge... 234 8e-60 UniRef50_C6JD26 Integral membrane sensor signal transduction his... 234 8e-60 UniRef50_UPI0001973B3A histidine kinase n=1 Tax=Clostridium sp. ... 233 1e-59 UniRef50_A9KTC9 Histidine kinase internal region n=3 Tax=cellula... 233 1e-59 UniRef50_D1PPK9 Putative two-component sensor histidine kinase n... 232 3e-59 UniRef50_A5ZT84 Putative uncharacterized protein n=1 Tax=Ruminoc... 231 4e-59 >UniRef50_P0AA94 Inner membrane protein ypdA n=114 Tax=Bacteria RepID=YPDA_ECO57 Length = 565 Score = 748 bits (1933), Expect = 0.0, Method: Composition-based stats. Identities = 565/565 (100%), Positives = 565/565 (100%) Query: 1 MHEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFST 60 MHEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFST Sbjct: 1 MHEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFST 60 Query: 61 WSGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSIL 120 WSGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSIL Sbjct: 61 WSGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSIL 120 Query: 121 AGCISGWINLKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILG 180 AGCISGWINLKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILG Sbjct: 121 AGCISGWINLKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILG 180 Query: 181 SVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIH 240 SVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIH Sbjct: 181 SVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIH 240 Query: 241 ADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSM 300 ADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSM Sbjct: 241 ADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSM 300 Query: 301 LVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAE 360 LVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAE Sbjct: 301 LVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAE 360 Query: 361 LRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKEL 420 LRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKEL Sbjct: 361 LRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKEL 420 Query: 421 YQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTI 480 YQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTI Sbjct: 421 YQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTI 480 Query: 481 SVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRRL 540 SVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRRL Sbjct: 481 SVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRRL 540 Query: 541 EPGTEIAFYIPNQRTPVASQATLLL 565 EPGTEIAFYIPNQRTPVASQATLLL Sbjct: 541 EPGTEIAFYIPNQRTPVASQATLLL 565 >UniRef50_Q2RH26 Histidine kinase internal region n=3 Tax=Bacteria RepID=Q2RH26_MOOTA Length = 576 Score = 616 bits (1590), Expect = e-175, Method: Composition-based stats. Identities = 189/570 (33%), Positives = 320/570 (56%), Gaps = 16/570 (2%) Query: 5 FNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGV 64 ++M L + +R +++ F L R +L + + ++ L + + + T++G+ Sbjct: 3 WSMGLHLAERLSMVATAAFILSRTPALGRILSRQL-TNRDRLLLVLVLGGMGIVGTYAGI 61 Query: 65 PVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCI 124 P+ +L N R++ VM G+L GP+VG G+IAGIHRYL+ GG TA C + ++ G + Sbjct: 62 PIHDALANSRVVGVMVAGLLGGPFVGAGAGLIAGIHRYLM--GGFTAFACGLAAVAEGTL 119 Query: 125 SGWINLKIPKAQ-RWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMI-LGSV 182 G + ++ W + G++ ET+ M+++++ A +V IG PMI + S+ Sbjct: 120 GGLVQQCYRRSPVPWPMAFAAGLVGETMQMVIILLTARPFTEAWALVQIIGPPMIIVNSI 179 Query: 183 CIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VNSESLRKVCEIIRDDIHA 241 + + +V++ +++ AA QA+ ALDIAN+TLP RH +N ES + II + I Sbjct: 180 GVAIFMFIVKTAAEQQDHIAACQAQRALDIANQTLPFLRHGLNRESAEEAARIIFNSIKV 239 Query: 242 DAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRT----PEI 297 AVAIT+ +LA+VG+G ++ G ++ T QA+ G++ + + + Sbjct: 240 AAVAITDRQEILAHVGMGSDHHHPGMPIMTSATLQAIATGELQLARSRGEIGCREKDCRL 299 Query: 298 HSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMAN 357 S +V+PL + GTLK+Y+ + IT+ E+A GL+ + STQLE++ + ++ + Sbjct: 300 ASAVVVPLKRREATIGTLKLYHERENSITTVDLELARGLAHLFSTQLELAEVKYQAQLRS 359 Query: 358 KAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIK 417 +AEL+ LQ++I+PHFLFNALN ISS IR P+ AR+L+ L+ + RY++ +DD I + Sbjct: 360 QAELKVLQAQIHPHFLFNALNTISSLIRTRPEKARELLAKLASFFRYSLR-RDDNPIPLA 418 Query: 418 KELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKG 476 +EL + Y+AIE+ARFG+KL VI +D + +P+ +QP+VENAI HG+QP G Sbjct: 419 EELAHVDSYLAIEEARFGNKLEVIRQVDPATLAFPVPAFTLQPVVENAIKHGLQPRTQGG 478 Query: 477 VVTISVAECGNRVRIAVRDTGHGIDPKVIERV-EANEMPGNKIGLLNVHHRVKLLYGEGL 535 V ++ ++ G V + V D G GI P+ + ++ G+ +GL V+ R+K LYG Sbjct: 479 RVILNASDRGADVEVRVTDDGVGIAPEEMNKIFLPGYGRGHGLGLSIVNERLKALYGPEY 538 Query: 536 HIR---RLEPGTEIAFYIPNQRTPVASQAT 562 +R GTE+ P + + Sbjct: 539 AVRVKSVPGQGTEVVLRFPKKVEHREVKEE 568 >UniRef50_Q39S58 Histidine kinase internal region n=4 Tax=Bacteria RepID=Q39S58_GEOMG Length = 576 Score = 613 bits (1582), Expect = e-174, Method: Composition-based stats. Identities = 208/576 (36%), Positives = 316/576 (54%), Gaps = 18/576 (3%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 + ++L+ + +R L I ++R + + L A S E L ++ +F + T+ G Sbjct: 1 MLHLLVNLLERLGLFAIAFILVMRFAIVKRFLIGKA-SRYEKLTLSVLFGFIGIAGTYMG 59 Query: 64 VPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGC 123 VP++ ++ N R++ V GGIL GP VG G+IAG HR+LID+GG TA C + +I G Sbjct: 60 VPIQNAIANSRVVGVALGGILGGPLVGFGAGLIAGGHRFLIDVGGFTATACGVATIAEGV 119 Query: 124 ISGWINLKIPKAQ-RWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL-GS 181 G I ++ + Q V + G+ ETL M++++V A + +VS IG PMIL S Sbjct: 120 AGGLIYHRLKRGQFDPAVAFITGVAVETLQMVILLVMAKPFTAAVSLVSVIGFPMILVNS 179 Query: 182 VCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VNSESLRKVCEIIRDDIH 240 + + V LV SV EKE AA QA+ AL+IA +TLP R + S IIR+ Sbjct: 180 IGLALFVELVSSVFREKERFAAVQAQTALNIALRTLPFLRGGLTEGSAAATARIIREMTD 239 Query: 241 ADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDE----AHRTPE 296 DAVAIT+ +LA+ G E +++ G ++ +TR A+ G+I + H Sbjct: 240 LDAVAITDEAAILAHTGAEEDHHRPGLPLLTASTRSALASGEITTPLTRDDIGCTHEGCR 299 Query: 297 IHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMA 356 + S +++PL ++ G LK+Y IT E+A GL+ + S QLE+S E R++ Sbjct: 300 LGSAIIVPLKKRERTVGALKLYRLKEGGITPLDMELANGLAHLFSNQLEISELEAQRKLV 359 Query: 357 NKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDI 416 +AE+RALQ++INPHFLFN +N I S R +P+TA L+ L+ + R NI D + + Sbjct: 360 REAEIRALQAQINPHFLFNTINTIISYTRTSPETASDLLVKLADFFRRNINPGGDS-VPL 418 Query: 417 KKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGK 475 EL + YIAIE+ARF D+L V++D+DEE + C +P+L +QPLVENA+ HGI P + Sbjct: 419 ATELEHCRAYIAIEKARFEDRLRVVFDVDEEALGCKLPTLTLQPLVENALKHGILPREEG 478 Query: 476 GVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMP-----GNKIGLLNVHHRVKLL 530 G + + G VRI V D G G+ P+ + R+ + E G I L NV+ R+ L Sbjct: 479 GEIRVGAHREGGVVRIVVGDNGVGMPPEQVARLFSGESSQLPTEGAGIALNNVNARLSAL 538 Query: 531 YGE--GLHIRRL-EPGTEIAFYIPNQRTPVASQATL 563 YG L + GT ++F +P + +L Sbjct: 539 YGPEHALRVESTPGAGTTVSFTVPQGGRGEYAHESL 574 >UniRef50_A1HTW6 Signal transduction histidine kinase, LytS n=2 Tax=Bacteria RepID=A1HTW6_9FIRM Length = 564 Score = 607 bits (1566), Expect = e-172, Method: Composition-based stats. Identities = 193/561 (34%), Positives = 315/561 (56%), Gaps = 16/561 (2%) Query: 6 NMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVP 65 ++ + + R A++ + + + FR L+ +P+E + FS ++ T+ G+P Sbjct: 4 SLSMVLSQRIAIIAVVAYIFSQTNAFR-LMFTENTTPREKCILILFFSTVSIAGTYFGIP 62 Query: 66 VEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCIS 125 +EG++ NVR + G+L GP VG TG+I+G+HR I +GG TA+PC + +I+ G + Sbjct: 63 IEGAIANVRDTGSIVAGLLGGPLVGTATGLISGLHR--ISLGGFTAVPCGLATIIGGIFA 120 Query: 126 GWINLKI-PKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL-GSVC 183 G+++ K PK W G+L G+ +M L+++++ A +V ++ +PM L ++ Sbjct: 121 GYVHSKTRPKTTEWITGVLIGVAVILFSMALILLFSKPAAAARSLVMQVTVPMCLANALG 180 Query: 184 IGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VNSESLRKVCEIIRDDIHAD 242 I ++++ + + A Q AL IAN LP FR ++ S KV I + A Sbjct: 181 IAVFMIIIHNAREHQTKIGALQTNKALRIANAALPYFRQGLSDLSAEKVAATILNMTSAA 240 Query: 243 AVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEA----HRTPEIH 298 AVAITN + VLA+VG+G ++ NG ++ T+ + G++ + H + Sbjct: 241 AVAITNREKVLAHVGLGSDHHTNGRPLLTAATKSCLESGQVTVAQRSSEIGCIHPNCPLK 300 Query: 299 SMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANK 358 S +V+PL+ + + GTLK+YY +T+ E A GL QI+STQLE++ +Q E+A K Sbjct: 301 SAVVVPLYCRDEIVGTLKMYYALEEAMTALDLEFAQGLGQILSTQLELANLQQKAELAAK 360 Query: 359 AELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKK 418 AEL+AL+++INPHFLFNALN I S R NP+ AR L+ LS + R +++ D + +++ Sbjct: 361 AELKALRAQINPHFLFNALNTIVSLCRTNPEQARNLLIELSDFFRRSLKSARD-FVTLRE 419 Query: 419 ELYQIKDYIAIEQARFGDKLTVIYDID-EEVNCCIPSLLIQPLVENAIVHGIQPCKGKGV 477 EL + Y+A+E+ARFG +LTV+ DID +N +P+ +QPLVEN + HG+ + G Sbjct: 420 ELEHVDSYLALEKARFGRRLTVVKDIDAAALNILLPAFTLQPLVENGVKHGLLAKEEGGT 479 Query: 478 VTISVAECGNRVRIAVRDTGHGIDPKVIERVEA-NEMPGNKIGLLNVHHRVKLLYGEGLH 536 + IS G+ V I + D G GI + E + GN IGL NV+ R+K +YG Sbjct: 480 IRISAHCQGSDVHITISDDGQGIPSSIQEHILVCGFGKGNGIGLSNVNERLKTIYGPQYA 539 Query: 537 I---RRLEPGTEIAFYIPNQR 554 + R GT + ++P R Sbjct: 540 LKINSREGKGTTVKLHVPISR 560 >UniRef50_C5VR12 Sensor protein LytS n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VR12_CLOBO Length = 557 Score = 607 bits (1565), Expect = e-172, Method: Composition-based stats. Identities = 237/558 (42%), Positives = 381/558 (68%), Gaps = 7/558 (1%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 + +++ + + ++ F L + ++++ K + K+L+ ++ +F F + T+ G Sbjct: 1 MVDLIKNLINNMGYFILIAFVLSQCESLKKIIVKDEFNKKDLVILSIVFGGFGILGTYIG 60 Query: 64 VPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGC 123 + G++ N RI+ VM+GGIL GP++GI++ +I+GIHR LI+ GG+TAIPC +T++ G Sbjct: 61 TEIHGAIANTRIVGVMAGGILCGPFIGILSAIISGIHRVLIESGGLTAIPCAVTTVACGF 120 Query: 124 ISGWINLKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPM-ILGSV 182 I G+++ ++ RW G+LGG+ ETL MIL+++++ + + IV I IPM + +V Sbjct: 121 IGGFLHKYTNQSNRWLYGLLGGLGVETLEMILILIFSKPFYVALSIVKNIYIPMGLANAV 180 Query: 183 CIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIHAD 242 I ++LL++++ EKE AA+QAK++LDIANKTLP FR +N+ES K+C+II++ I +D Sbjct: 181 GISLLILLIENIFEEKEEIAAKQAKISLDIANKTLPYFREINAESFEKICKIIKEYIKSD 240 Query: 243 AVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEA----HRTPEIH 298 AVAIT+ HVLA+VG+G ++ G + ++ T + + GKI+ N E + + Sbjct: 241 AVAITDKKHVLAHVGLGADHHIKGAEILTHATEKVIKQGKILTLTNAEEINCSCHSCPLK 300 Query: 299 SMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANK 358 S +++PL E+ + GTLKIYY I+ + +A+GLSQIISTQLE+S+ +L+EMA K Sbjct: 301 SGIIVPLKERKNIIGTLKIYYGKNDAISFKNKNLAIGLSQIISTQLEISKIGKLKEMATK 360 Query: 359 AELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKK 418 AE++ALQ++INPHFLFN+LN I+S +R+NP+ AR LI NLS +LRYN+E+ D+ +D+ K Sbjct: 361 AEIKALQTQINPHFLFNSLNTIASFVRINPNKARDLIINLSTFLRYNLEM-GDDLVDVYK 419 Query: 419 ELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVV 478 EL Q+K Y+++E+ARFG+K++V Y+I ++ +PSL+IQP+VENAI HGI KG V Sbjct: 420 ELEQVKAYVSVEKARFGEKISVAYNIQNNIDIKMPSLIIQPIVENAIKHGILNSGRKGKV 479 Query: 479 TISVA-ECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI 537 IS+ + N + V D G GI+ ++I++V + M NKIG+ NV++R+KL YG+GL+I Sbjct: 480 KISIELKSNNAFEVIVEDNGVGIEEEIIKKVYSGTMKENKIGISNVNNRLKLFYGQGLNI 539 Query: 538 RRLEPGTEIAFYIPNQRT 555 RLE GT+++F + + Sbjct: 540 ERLEEGTKVSFIVKRIKE 557 >UniRef50_C9RCQ9 Signal transduction histidine kinase, LytS n=4 Tax=Thermoanaerobacterales RepID=C9RCQ9_AMMDK Length = 572 Score = 604 bits (1558), Expect = e-171, Method: Composition-based stats. Identities = 193/560 (34%), Positives = 316/560 (56%), Gaps = 16/560 (2%) Query: 7 MLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPV 66 + L + +R +L+ F L R+ +L + SP++ L +T + + T++ VP+ Sbjct: 6 LALILAERLSLIATAAFLLSRMPALGRILSRQP-SPRDKLLLTLVMGGLGILGTYAAVPI 64 Query: 67 EGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISG 126 G+L N R++ VM G+L GP VG G+IAG+HRY +GG TA C + +++ G + G Sbjct: 65 HGALANSRVVGVMVAGLLGGPLVGAGAGLIAGVHRYF--LGGFTAFACGLAAVVEGTLGG 122 Query: 127 WINLKIPKAQ-RWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMI-LGSVCI 184 + + W + L G+ E L M ++++ A + +V IG+PMI + S+ + Sbjct: 123 LVRHYYRRNLVPWHIAWLAGLTGEMLQMGIILLTARPFPEALALVKIIGLPMITVNSIGV 182 Query: 185 GFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VNSESLRKVCEIIRDDIHADA 243 +L+V+S ++E AA QA+ AL IAN+TLP R ++ S ++V II + A Sbjct: 183 AIFMLIVKSAVEQEERVAALQAQQALKIANQTLPYLRQGLSEHSAQQVASIIYHSLKVAA 242 Query: 244 VAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEA----HRTPEIHS 299 VAIT+ + +LA+VG G ++ G ++ T +A+ G+I + + H + S Sbjct: 243 VAITDREKILAHVGTGSDHHHPGHPILTSATLKALATGEIQVAQTRKEIGCCHPNCRLGS 302 Query: 300 MLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKA 359 +V+PL + GTLK+Y+ + IT E+A GL+++ STQLE++ E + +A Sbjct: 303 AVVVPLKLRENTIGTLKLYHTQENSITPVNLELARGLARLFSTQLEIAELEYQARLKTQA 362 Query: 360 ELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKE 419 EL+ALQ++++PHFLFNALN I+S IR P AR+L+ L+++LR+++ ++ I + +E Sbjct: 363 ELKALQAQVHPHFLFNALNTITSLIRTRPGEARELLVKLAKFLRHSLR-DENTVIPLAEE 421 Query: 420 LYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVV 478 L ++ Y+AIE+AR GDKL V Y +D + + L++QPLVENA+ HG+ P G V Sbjct: 422 LSCVEAYLAIEKARQGDKLQVFYRVDPSALGYPVLPLILQPLVENAVKHGLYPKAEGGKV 481 Query: 479 TISVAECGNRVRIAVRDTGHGIDPKVIERVE-ANEMPGNKIGLLNVHHRVKLLYGE--GL 535 I V + V I V+D G GI P + ++ A G +GL V+ R+K YG GL Sbjct: 482 EIIVEDLPEEVMIMVKDDGIGIAPAELAKIPLAGYGRGRGLGLFLVNERLKKFYGPEYGL 541 Query: 536 HIRR-LEPGTEIAFYIPNQR 554 I+ GTE++ P + Sbjct: 542 KIKSAPGQGTEVSLSFPKRE 561 >UniRef50_C0ZI45 Two-component sensor histidine kinase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZI45_BREBN Length = 575 Score = 586 bits (1512), Expect = e-166, Method: Composition-based stats. Identities = 188/564 (33%), Positives = 311/564 (55%), Gaps = 21/564 (3%) Query: 5 FNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGV 64 +++ + +R A++++ R+R FR +L++ A + +E + IFS ++ T++G+ Sbjct: 3 LALMVPLTERTAVLIVMALLFTRVRAFRSILNQQA-TWREKALMVVIFSAISILGTYNGI 61 Query: 65 PVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCI 124 + ++ N R+I + G+L GPWVG++TG+IAGIHRY +GG T + C I++I G Sbjct: 62 WYQDAIANSRVIGTVVAGLLAGPWVGLMTGLIAGIHRY--SLGGFTDLACAISTISEGLF 119 Query: 125 SGWINLKIPKAQR---WRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPM-ILG 180 +G I + + W + G L E L M +V++ A A + +V I +PM ++ Sbjct: 120 AGLIYQFLRNRSKKIGWTTALFVGFLAEWLQMGIVLLIARPYADALALVQAISVPMSVVN 179 Query: 181 SVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VNSESLRKVCEIIRDDI 239 SV I +++++ + E++ A QA+ L +A+KTL R + +S +KV E I Sbjct: 180 SVGIAILIIIIDLAKKEEDRIGALQAQRTLQVADKTLSYLRQGLTYDSAQKVAEEILRTT 239 Query: 240 HADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRT----P 295 AVAIT+T VLA+VG G ++ G+ + TR+ ++ ++ I E Sbjct: 240 RVAAVAITDTRSVLAHVGAGSSHHVVGEGITTKATREVLSTKEVKIAQTKEEIGCRETNC 299 Query: 296 EIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREM 355 + +++PL + V G LK+Y + ++++ E+ GL +IS+QLE++ E+ + Sbjct: 300 PLRYAILVPLMRRREVAGVLKLYQDRSRKLSAVDLELVRGLGNLISSQLELAELEKQSRL 359 Query: 356 ANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQID 415 AE+RAL ++INPHFLFNALN I S IR P+ AR+L+ +L Y R N+ + Sbjct: 360 LADAEIRALHAQINPHFLFNALNTIVSFIRFRPEQARELLIHLGEYFRRNLHDSGG-YVS 418 Query: 416 IKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKG 474 + +EL I+ Y+AIE+ARFGDKL V YDI++ V +P L++QPLVENA+ HG+ P + Sbjct: 419 LARELEHIEAYLAIERARFGDKLHVEYDIEDGVERFTVPGLILQPLVENAVKHGLLPKRE 478 Query: 475 KGVVTISVAECGNRVR-IAVRDTGHGIDPKVIERVEANEMPG---NKIGLLNVHHRVKLL 530 G V I ++ + V D G G++ ER + G + IGL NV R++ + Sbjct: 479 GGTVVIRACRKEKQIVELTVADNGVGMEVDPSERAPDEKRAGRQLSGIGLANVKSRLQSI 538 Query: 531 YGEGLHI---RRLEPGTEIAFYIP 551 YGE I + GT +P Sbjct: 539 YGEPYGIVIESKSGSGTTCTIQLP 562 >UniRef50_A8MGZ4 Signal transduction histidine kinase, LytS n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MGZ4_ALKOO Length = 556 Score = 585 bits (1508), Expect = e-165, Method: Composition-based stats. Identities = 201/560 (35%), Positives = 333/560 (59%), Gaps = 18/560 (3%) Query: 3 EIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWS 62 EIF + + + + +LM + F L + F+ L+ +S K + + IFS F + T+ Sbjct: 2 EIFKIPITLLNSISLMFLITFLLSKTNSFKNLILNKKNSFKNKIFLAIIFSTFGILGTYY 61 Query: 63 GVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAG 122 G P+EG++ N R+I V+ GG+L GP+VGI GV+AG+HR++IDIGG T++ C I++++ G Sbjct: 62 GFPIEGAIANSRVIGVVVGGLLAGPFVGISAGVVAGVHRWVIDIGGFTSVACMISTVVGG 121 Query: 123 CISGWINLKIPKAQ-RWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPM-ILG 180 + K W +G M+ E L M++VI+ A + +++V KI +PM ++ Sbjct: 122 ILGSIAYRYKDKVNKNWILGFSVTMVAEILQMLIVIIVAKPYPVAVNVVKKIIMPMTLMN 181 Query: 181 SVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDDI 239 S+ + +LL++S+ E+E AA Q++LAL IA+KTLP+ R N E+ C+II Sbjct: 182 SIGVALFILLLESIFKEQEREAAIQSELALKIADKTLPILRNGFNQETASATCDIIYSIA 241 Query: 240 HADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRT----P 295 DAVAITN ++A+VGVG ++ G+ + T+ A+ + +I N E Sbjct: 242 KVDAVAITNKSEIIAHVGVGSDHHLPGETIKTVATKTALKLKRSVIVENKEEIGCQNKNC 301 Query: 296 EIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREM 355 ++ S +V+PL++K V G LKIY + I+S ++A L+++ STQ+E++ + ++ Sbjct: 302 KLKSTIVVPLFKKDQVIGVLKIYKATKNGISSVDVQLAEDLAKLFSTQIELAEIDYNAKL 361 Query: 356 ANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQID 415 + AEL+ALQ++INPHFLFN++N I S R++P+ AR+L+ NL +LR + + +++ +D Sbjct: 362 LSIAELKALQAQINPHFLFNSINTIVSLCRIDPELARKLLINLGNFLRESFK-ENEYIVD 420 Query: 416 IKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGK 475 I E+ ++ Y+ IE+ARFG KL V+YDI+ + N IP L++QPLVENA+ HGI P K Sbjct: 421 ISNEIKHVEAYLEIEKARFGKKLNVVYDINCD-NFKIPHLVLQPLVENAVKHGIYPKKDG 479 Query: 476 GVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGL 535 G + + + E I + D G G D A++ + IG+ NV R++ +YG+ Sbjct: 480 GTIYVMIHEDLEHYIIHIEDNGIGFDSG------AHKPTHHGIGIKNVDKRLQSIYGKDY 533 Query: 536 HI---RRLEPGTEIAFYIPN 552 + ++ GT+I IP Sbjct: 534 GLKIQSTIDIGTKILINIPK 553 >UniRef50_A1VG05 Signal transduction histidine kinase, LytS n=4 Tax=Desulfovibrio RepID=A1VG05_DESVV Length = 580 Score = 582 bits (1500), Expect = e-164, Method: Composition-based stats. Identities = 183/565 (32%), Positives = 299/565 (52%), Gaps = 15/565 (2%) Query: 1 MHEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFST 60 + I M + + +R L+L F ++ + +L S + + +FSLF + T Sbjct: 4 VPYIPPMFITLSERFGLLLAGGFAIMTLAPLDKLGPGRTRSWRATALLVVLFSLFTILGT 63 Query: 61 WSGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSIL 120 ++G V S N+R + ++ G+ GP VG +TG+IAG HRY ID+GG +A+PC + + L Sbjct: 64 YNGNIVFQSFANLRAMGAVTAGLFGGPVVGALTGLIAGGHRYFIDVGGFSAVPCGLATFL 123 Query: 121 AGCISGWINLKIP-KAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMI- 178 G +G + P ++ W + + E + M LV+ A A +D+V IG+PMI Sbjct: 124 EGLAAGLFAWRFPSRSLDWGTAMTFAAVGEAVHMCLVLGLARPYAQAVDLVEVIGLPMIL 183 Query: 179 LGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRD 237 L V V ++ ++ + QA+ L IAN+TLP R +++ S R EII D Sbjct: 184 LNGVGAAIFVQALRMQMHFRDLRDSSQARQILSIANRTLPHLRAGLSAASARATAEIILD 243 Query: 238 DIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYG-KIIIKNNDEAHRT-- 294 + AVA+T+ D V+A+VG +++ G + TR+ G + + +DE Sbjct: 244 ETRVAAVALTSNDMVMAHVGAASDHHRAGHSVCTQATRRVATDGIPLFVTGHDEIGCQLE 303 Query: 295 -PEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLR 353 + S +++PL + + G LK+Y + +L E+A GL+ + +TQ+E+ Sbjct: 304 ACPLCSAIIVPLRKGDTILGCLKLYGTKDRPLDQTLFELAKGLADLFATQIELEDIGIKN 363 Query: 354 EMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQ 413 ++ +AE+R LQ++INPHFLFN+LN ++S R P AR+LI +L+RY+R N++ E Sbjct: 364 QLLARAEIRRLQAQINPHFLFNSLNTVASFCRTAPGQARELILDLARYMRRNLDTS-REA 422 Query: 414 IDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPC 472 I + +E QI+ Y+ IE+ARFG+++ + DID E +C +P LLIQPLVEN++ HGI Sbjct: 423 IHLAEEAEQIRAYLVIEKARFGERIRAVIDIDPETEHCLVPPLLIQPLVENSVRHGILGN 482 Query: 473 KGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN---EMPGNKIGLLNVHHRVKL 529 + GVV ++ + V + V D G G+ + + G IG N + R+ Sbjct: 483 EEGGVVRLATSMEDGHVVVVVEDDGAGMPESTRQGILNGTPVTAHGEGIGASNCNQRLVQ 542 Query: 530 LYGEGLHIRR---LEPGTEIAFYIP 551 LYG + GT I F +P Sbjct: 543 LYGPAYALSIDSAPGMGTRITFRVP 567 >UniRef50_UPI0001C42EFA two-component sensor histidine kinase n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42EFA Length = 582 Score = 577 bits (1488), Expect = e-163, Method: Composition-based stats. Identities = 182/582 (31%), Positives = 317/582 (54%), Gaps = 34/582 (5%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 ++ +LL + +R +++ F + R R R ++ + S + L +F LF + T++G Sbjct: 1 MWELLLVMLERLGIIVTVAFLVTRFRFVRNIIEEKNVSSIQRLHFILMFGLFGIIGTYTG 60 Query: 64 VPVEG----------------SLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIG 107 + + ++ N R+I ++ G+L G VGI G+IAGIHRY +G Sbjct: 61 LTINAEEGVYTRWTLSLTDDEAIANARVIGIVVAGLLGGWKVGIGAGLIAGIHRY--TLG 118 Query: 108 GVTAIPCFITSILAGCISGWINLKIPKAQ--RWRVGILGGMLCETLTMILVIVWAPTTAL 165 G +A+ C I+++LAG I+G+ K + W+ +L GML E + M+++++ A + Sbjct: 119 GFSALACAISTVLAGLIAGYFYKKYRNHRMVSWKNALLIGMLAEAVQMLIILLIAKPFSA 178 Query: 166 GIDIVSKIGIPMIL-GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HV 223 +VS IG+PMI+ + +L++++V E+E QA+ + +AN+TL R + Sbjct: 179 AWALVSSIGVPMIIANGIGTAIFILIIRNVINEEERMGKLQAERSFKLANQTLKYMRKGL 238 Query: 224 NSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKI 283 N S + C I+ +I+ AV+ITN VLAYVG E N + + T++ + G+ Sbjct: 239 NESSAKAACHILFKEINVAAVSITNHQTVLAYVG--EENGNEKQEIKTKATKEVLKTGEW 296 Query: 284 IIKNNDEAHRT---PEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQII 340 + + + HS ++ PL + GTLK+Y+ + T + E+A GL++++ Sbjct: 297 KLADARDMEGLNVREPHHSAIIAPLIQNEKPVGTLKLYFKSEKERTPTTIELAKGLAELL 356 Query: 341 STQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSR 400 S QL+++ A+ ++A +AE+ AL++++NPHFLFNALN I S IR +P+ AR+L+ +LS+ Sbjct: 357 SQQLQLAYADDQLKLAKQAEINALEAQVNPHFLFNALNTIVSLIRTDPNKARKLLISLSK 416 Query: 401 YLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQP 459 + R N+ ++ IK+EL +K Y+ IEQARF D+L V Y++ + + +P + +QP Sbjct: 417 FFRQNLTGIHAKEATIKEELNHVKAYLQIEQARFSDRLEVYYEVSDSLMYVTVPPMTLQP 476 Query: 460 LVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV---EANEMPGN 516 LVENA+ HG++ G + I V + + V I V D+G GI + + + G Sbjct: 477 LVENAMKHGLKDKVGHCTLVIRVYQHEHFVCIDVEDSGVGISEQRQKELFTQPVQSEVGT 536 Query: 517 KIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRT 555 IGL N+ R++++YG I +E G I +R Sbjct: 537 GIGLYNMKRRLEMMYGSHFEIKVKSEVEQGATFTLCINQERD 578 >UniRef50_Q5WAM1 Two-component sensor histidine kinase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WAM1_BACSK Length = 597 Score = 568 bits (1465), Expect = e-160, Method: Composition-based stats. Identities = 196/578 (33%), Positives = 326/578 (56%), Gaps = 31/578 (5%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 +F +LL + +R L+++ F R+R FR ++ + + K+ F F + T+SG Sbjct: 1 MFELLLLMLERLGLIVMLAFIATRMRFFRVMVKSTRLTRKQTWTAILFFGAFGIIGTYSG 60 Query: 64 VPVEG----------------SLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIG 107 V + ++ N R+I V+ G+ G VG+ G+IAG+HR L +G Sbjct: 61 VTFQAESLVLQRITFGIQEDAAIANFRVIGVVLAGLFGGYKVGLSAGLIAGVHRML--LG 118 Query: 108 GVTAIPCFITSILAGCISGWINLKIPKA-QRWRVGILGGMLCETLTMILVIVWAPTTALG 166 G TA C I +I+AG + + K P A R L G L ET+ M L+ + A TA Sbjct: 119 GFTAFSCGIATIVAGLFAAFYRSKNPNAVNRPLSIFLLGALAETVQMGLIALLANPTAAA 178 Query: 167 IDIVSKIGIPMIL-GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VN 224 I +V IG+PMI+ + +L++QSV E++ + A QA+ +L IA +TL F+H ++ Sbjct: 179 ISLVQTIGLPMIVANGIGCTLFLLIIQSVTKEEQKAGALQAQKSLRIAEQTLAHFKHGLS 238 Query: 225 SESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKII 284 S S ++VC+I+ +++A A+A+TN D +LA++GV +++ + T + + ++I Sbjct: 239 SHSAKEVCDILYKELNACAIAMTNQDMILAHIGVAADHHKTNMSIQTKLTAEVIAKKQMI 298 Query: 285 IKNNDEAHR---TPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIIS 341 I +DE H + + ++ PL + V GTLK Y+ +IT EM GL+ ++S Sbjct: 299 IAGDDEIHCKEPNCPLGAAVIAPLIIRAEVVGTLKFYFHSKKEITELETEMLSGLTNLLS 358 Query: 342 TQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRY 401 +QLE++ A++ ++A +AE+ ALQ++I+PHFLFN LN + S IR+ P AR ++ +L+++ Sbjct: 359 SQLELAEADRAYQLAKEAEINALQAQISPHFLFNTLNTVISLIRIEPMKARTMLHSLAQF 418 Query: 402 LRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPL 460 LR N+ + + +EL+ IK Y++IE+ RF +LTV Y IDE ++ IP L +QPL Sbjct: 419 LRQNVSATTTKLHSLAEELHHIKAYLSIEEVRFEGRLTVQYKIDERFLHVSIPPLTLQPL 478 Query: 461 VENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN---EMPGNK 517 VENA+ HG + + V+ ISV E G V ++V+D G G DP ++++ G Sbjct: 479 VENAMKHGFKNKRSDCVLIISVQEQGEDVVLSVQDNGAGFDPDKLKKLGNELPATDSGTG 538 Query: 518 IGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPN 552 IGL N + R++++YG + + GT + F IP Sbjct: 539 IGLYNSNKRLQMMYGPEASLAFSAQPGRGTLVRFRIPK 576 >UniRef50_A1HSX0 Signal transduction histidine kinase, LytS n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSX0_9FIRM Length = 636 Score = 566 bits (1460), Expect = e-160, Method: Composition-based stats. Identities = 194/565 (34%), Positives = 314/565 (55%), Gaps = 17/565 (3%) Query: 5 FNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGV 64 F ++L + AL+ + F+ R R + +P+ L +T IFS+ ++ T++GV Sbjct: 75 FELVLELMGDMALLAMAANFIGRNRYIASC-AERPTTPRSWLTLTVIFSVLSILGTYTGV 133 Query: 65 PVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCI 124 PVEG+L N R++ + GGI+ GPWVG+ G I+G+HRYLI GG TA C ++L G + Sbjct: 134 PVEGALANTRLVGTLMGGIMGGPWVGLGIGFISGLHRYLI--GGFTAEICGAATLLGGLM 191 Query: 125 SGWINLKIP-KAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPM-ILGSV 182 +G K W+ L + E L +V++ A + I +P ++ + Sbjct: 192 AGMARQKYGLHGINWKKAALLALAAEGLQKGMVLLLAKPFEAAWALEKAIAVPTTVVTML 251 Query: 183 CIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VNSESLRKVCEIIRDDIHA 241 +L+++ ++ E+E A+ A+L+L+IA++TLP RH + ES +K EII Sbjct: 252 GTVVFMLILKDIKTEQELHGAKAAQLSLEIASRTLPFLRHGLTMESAQKTAEIIFAFTGM 311 Query: 242 DAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTP----EI 297 DAV+I+N + VLA+VG G +++ G+ ++ +T+Q + G + I + + P + Sbjct: 312 DAVSISNREQVLAFVGKGADHHKPGEPIMTQSTKQTLISGMLHIVHTAQEQGCPVAGCPL 371 Query: 298 HSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMAN 357 S +V PL G V GT+K+ + IT MA G++ ++S Q+E++ + R+M Sbjct: 372 QSSVVAPLVVNGAVIGTVKLNRTVPNGITEVDIRMAEGIAHLLSVQIELAEIDCQRKMRE 431 Query: 358 KAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIK 417 KAEL+ALQ++INPHFLFN +N I S R NPDTAR L+ +L+ LR++ + D + +K Sbjct: 432 KAELKALQAQINPHFLFNTINIIMSFCRTNPDTARSLLGHLATMLRHSFADRQD-FVTLK 490 Query: 418 KELYQIKDYIAIEQARFGDKLTVIYDIDE-EVNCCIPSLLIQPLVENAIVHGIQPCKGKG 476 +E+ I Y+ I +ARFG +LTV +ID + IP L +QPLVENA+ HG+ P Sbjct: 491 EEMEGIAAYLEIVKARFGSRLTVKTEIDPILLEAPIPLLTLQPLVENAVQHGLFPKLSHC 550 Query: 477 VVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLH 536 V+TI+ + I VRD G GI + + + A + G IG+ NV+ R+ +YG+ Sbjct: 551 VLTIAAGLRDGAMVIEVRDNGVGIPVEKLRTILAGQ--GQGIGIRNVYKRLTGIYGKEYG 608 Query: 537 I---RRLEPGTEIAFYIPNQRTPVA 558 + L GT + IP + +A Sbjct: 609 LAIESTLGQGTTVRIVIPYEGRDLA 633 >UniRef50_A0PY88 Two-component sensor kinase n=2 Tax=Clostridium RepID=A0PY88_CLONN Length = 553 Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 244/551 (44%), Positives = 366/551 (66%), Gaps = 7/551 (1%) Query: 6 NMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVP 65 ++ ++ + ++ F L + + ++ K S K+L+ ++ +F + T+ G Sbjct: 2 ELIKSLINNIGYFILIAFVLSQCESLKNIIIKEEFSKKDLVILSILFGGLGILGTYIGTE 61 Query: 66 VEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCIS 125 + G++ N RI+ VM+GGI GP +GI + +I+G HR LID GGVTAIPC IT++ +G I Sbjct: 62 IHGAIANTRIVGVMAGGIFCGPIIGIASSIISGTHRLLIDSGGVTAIPCAITTVASGFIG 121 Query: 126 GWINLKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPM-ILGSVCI 184 G ++ + RW G +GG++ ETL MIL+++++ L + IV I IPM ++ I Sbjct: 122 GILHKYANQTNRWIYGFIGGIVVETLEMILILIFSKPFDLAVHIVKNIYIPMGFANAIGI 181 Query: 185 GFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIHADAV 244 ++LL++++ +KE AA+QAKLALDIANKTLP FR ++S S K+C+II+ I ADAV Sbjct: 182 SLLILLIENIYEQKEEVAAKQAKLALDIANKTLPYFRDMDSRSFEKICKIIKKSIKADAV 241 Query: 245 AITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRT----PEIHSM 300 AIT+ HVLA+VG+GE ++ G + ++ T + + GKI+I N + S Sbjct: 242 AITDKKHVLAHVGLGEEHHIKGAEILTQATERVIKEGKILILTNASEINCAYPFCPLKSG 301 Query: 301 LVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAE 360 +++PL E+ + GTLKIYY + I+ + +A+GLSQIISTQLE+S+ +L++MA KAE Sbjct: 302 IILPLKERNNIIGTLKIYYGKNNSISFKNKNLAIGLSQIISTQLEISKIGKLKKMATKAE 361 Query: 361 LRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKEL 420 ++ALQ++INPHFLFN+LN I+S +R+NP AR+LI NLS +LRYN+E+ DE +D+ EL Sbjct: 362 IKALQTQINPHFLFNSLNTIASFVRINPAKARELIINLSVFLRYNLEI-GDELVDVYSEL 420 Query: 421 YQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTI 480 Q+K Y+AIE+ARFG+KL VIY+I + ++ +PSL+IQP+VEN+I HGI KG+V I Sbjct: 421 EQVKAYVAIEKARFGEKLQVIYNIQDNIDIKMPSLIIQPIVENSIKHGILKSGRKGIVKI 480 Query: 481 SVAECGNRV-RIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRR 539 + + +AV D G GI+ +IE+V M NKIG+ NV++R+KLLYGEGL I R Sbjct: 481 DIKYINDYAFEVAVEDNGVGIEKDIIEKVYNGTMKENKIGISNVNNRLKLLYGEGLKIER 540 Query: 540 LEPGTEIAFYI 550 LE GT +F I Sbjct: 541 LEEGTRASFII 551 >UniRef50_B8CWX8 Signal transduction histidine kinase, LytS n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWX8_HALOH Length = 578 Score = 562 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 176/568 (30%), Positives = 312/568 (54%), Gaps = 18/568 (3%) Query: 6 NMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVP 65 +L + +++ + L RLF+ + S KE + + F L + T+ + Sbjct: 9 GLLFILVRNMGVVVTFAYILSMTRLFKRFFYA-PLSRKEKIFLVIFFGLLSASGTYLSIY 67 Query: 66 VEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCIS 125 + + N+R I + G L GP +G++ G + GIHR+ +GG TA+ C I ++ +G I Sbjct: 68 IMDAYANIRAIGAVVAGFLGGPLIGVLVGTVGGIHRF--TLGGFTALACAIGTMTSGLIG 125 Query: 126 GWINLKIPKAQ-RWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL-GSVC 183 G + Q + G + + M++VI+++ L + +VS I +PMI+ + Sbjct: 126 GLFHKSFKNQQINSKNSFYIGAVALIIEMVIVIIFSRPIELALQLVSVISLPMIIANAAG 185 Query: 184 IGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHV--NSESLRKVCEIIRDDIHA 241 I V ++ +VE E E A+QA+L LDIAN+T+ FR + +++K EII A Sbjct: 186 ISLFVSILNNVEKENENIKAKQARLTLDIANQTINYFREGLAHGRAVKKASEIILQKTGA 245 Query: 242 DAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTP----EI 297 AVAIT+ + ++A+ G G ++ G+ F++ TRQ +N GK+ + + P + Sbjct: 246 SAVAITDREKIIAFAGKGSDHHFPGEPFLTSVTRQTINEGKVSVAKTKKEVGCPVENCPL 305 Query: 298 HSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMAN 357 S++V PL G V G+LK+Y+ +++ +A G+S ++STQ+++SR + ++ Sbjct: 306 ESVVVAPLKWDGRVMGSLKLYHT-ERKLSKVDISLAEGISTLLSTQIQLSRLSEQAKLKT 364 Query: 358 KAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIK 417 +AEL+ALQ+++NPHFLFN+LN I+S R +P+ AR+L+ LS + R + K + + ++ Sbjct: 365 EAELKALQAQVNPHFLFNSLNTIASFTRTDPEKARELLLRLSDFFRTTLS-KGHDLVSLE 423 Query: 418 KELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKG 476 E+ +++Y +E+ARFG++L ++ +I +E ++ IPS +QPL+ENA+ HGI P KG Sbjct: 424 TEIKSVRNYFFLEKARFGERLELVINIPDEYMSVMIPSFTLQPLIENAVKHGIFPKNRKG 483 Query: 477 VVTISVAECGNRVRIAVRDTGHGIDPKVIER-VEANEMPGNKIGLLNVHHRVKLLYGEGL 535 + +SV + + + VRD G GI + ++ ++ G+ IGL NV R+K ++G Sbjct: 484 KIDLSVRSNEDIIELIVRDNGVGIPEEELKMVLKEGYGKGSGIGLSNVMARIKNIFGPEY 543 Query: 536 HI---RRLEPGTEIAFYIPNQRTPVASQ 560 + GTE+ +P Q Sbjct: 544 GLTMESEENTGTEVVIKVPLQTIKREEN 571 >UniRef50_Q3AA02 Sensor histidine kinase n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AA02_CARHZ Length = 552 Score = 559 bits (1442), Expect = e-158, Method: Composition-based stats. Identities = 198/559 (35%), Positives = 319/559 (57%), Gaps = 26/559 (4%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 + + + + +R ++++ FF+ + RLFR +L + + ++ L + F LF + T+ G Sbjct: 1 MNELFINLIERLSVIITLAFFVSKTRLFRNILQQEL-TIRQKLGLILGFGLFGIIGTYWG 59 Query: 64 VPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGC 123 +P++G++ N R++ GI+ GP G++ G+IAG+HR +GG TA+ C I++ + G Sbjct: 60 IPIKGAIANSRVVGPAIAGIIGGPAAGLLAGLIAGVHRAW--LGGFTAVACGISTTVEGL 117 Query: 124 ISGWINLKIPKAQ-RWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL-GS 181 I+G + + P+ + GIL GM ETL MI++++ A + +V IG+PMIL Sbjct: 118 IAGVLARRFPEKRFNVVFGILTGMFIETLQMIIILLLARPFEDALSLVKVIGLPMILVNG 177 Query: 182 VCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDDIH 240 + IG +L+++S EKE A A+ AL+IAN+TLP+ R +N E+ KV II + Sbjct: 178 IGIGVFLLILESTVKEKEHIGAVYAEKALNIANETLPILREGLNRETAFKVSRIILNKTD 237 Query: 241 ADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRT----PE 296 ADAVA+T+ + +LA+VG GE ++ +G + T +A+N G++ + N EA + Sbjct: 238 ADAVALTDKNIILAHVGSGEDHHLSGTPIKTAATAKALNNGELTVVLNKEAIGCSNSNCK 297 Query: 297 IHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMA 356 + S ++ PL+ + V G LK+YY +I GLS++ISTQLE+S E ++ Sbjct: 298 LASAVIAPLFIRNEVVGALKLYYNKPDKIGEFTITFIEGLSRLISTQLELSMLEHQAKLL 357 Query: 357 NKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDI 416 +AEL+ALQ++INPHFLFN+LN I + R NPD AR+LI LS Y R N+ + I + Sbjct: 358 ARAELKALQAQINPHFLFNSLNTIVALCRKNPDQARELIIKLSEYFRRNLREW-EPLIPL 416 Query: 417 KKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGK 475 +EL ++ Y+ E+ARF DKL V +ID++V +P ++ LVENA+ HGI P K Sbjct: 417 AEELKNVELYLTFEKARFSDKLQVNLNIDDKVKEVMVPPFAVETLVENAVKHGILPKK-G 475 Query: 476 GVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLY---G 532 G+V I+ N+ I + D G G+ V +GL N+ R++ L+ G Sbjct: 476 GLVQINAKLQDNKAVIEIVDNGVGLREDV----------KVGVGLSNLKERLRNLFREEG 525 Query: 533 EGLHIRRLEPGTEIAFYIP 551 + R + GT IP Sbjct: 526 QFYLYSREDGGTISRLIIP 544 >UniRef50_A8VV76 Signal transduction histidine kinase, LytS n=3 Tax=Bacillus RepID=A8VV76_9BACI Length = 625 Score = 557 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 192/576 (33%), Positives = 325/576 (56%), Gaps = 33/576 (5%) Query: 6 NMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVP 65 + + + +R ++++ F + RI +FR ++ + + + ++VT +F F + T++GV Sbjct: 39 ELFVIMLERLGIIVMVAFIMTRIPIFRRVVDDRSVTFSQKVSVTLLFGFFGIIGTYTGVV 98 Query: 66 V----------------EGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGV 109 V + ++VN R+I ++ G+L G VG+ GVIAG HR+L +GG Sbjct: 99 VSTGQASYMMWLSELAEDEAIVNARVIGIVVAGLLGGWKVGLGAGVIAGGHRFL--LGGF 156 Query: 110 TAIPCFITSILAGCISGWINLKIPKAQRW--RVGILGGMLCETLTMILVIVWAPTTALGI 167 T C +++I+AG ++G+ + + K + V G L ET+ M ++++ A Sbjct: 157 TGFACGLSAIIAGLLAGFAHRYVDKGKNISLGVTFFVGALSETIQMGIILLVARPYEQAF 216 Query: 168 DIVSKIGIPMIL-GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VNS 225 +V IG+PMIL V VL+++SV E+E AA Q+ AL IA T+ R + + Sbjct: 217 ALVEMIGLPMILANGVGAAVFVLIIRSVIREEEKLAAVQSGRALSIAEDTISFMRQGLTT 276 Query: 226 ESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIII 285 S + C+I+ ++ A AV++T+ + +LAY G G YQ G + TRQ +N G+ I Sbjct: 277 ASAGQTCQILLKEVGASAVSMTDRERILAYYGKGVDIYQAGGPIRTEATRQVLNQGEPYI 336 Query: 286 KNNDEAHRT----PEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIIS 341 + +T P+IH+ +++PL EK V GTLK Y+ +IT +E+ +GLS+++S Sbjct: 337 GTQNRQDQTENLYPDIHAAMIVPLMEKDSVIGTLKFYFPTEKEITPLKRELILGLSRLLS 396 Query: 342 TQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRY 401 QLE++R E+LR +A + E++ALQ++++PHFLFNALN I S IR +P+ AR+L+ +LS + Sbjct: 397 NQLELARVEELRHLAQETEVKALQAQVSPHFLFNALNLIVSMIRTDPERARKLLLSLSHF 456 Query: 402 LRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPL 460 R N+ + + +EL QI+ Y+ I++ARF +L V +++D+ +N IP+L +QPL Sbjct: 457 FRQNLAGTNQTWSTLGQELKQIESYLEIQEARFQGELNVRWEVDDTLLNWQIPTLTMQPL 516 Query: 461 VENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN---EMPGNK 517 +ENAI HG + + VT+ + VR+ + + G I + + + G Sbjct: 517 IENAIKHGRKAAREPLDVTVRIERVAESVRVTIWNNGRAIPHERLALLAKGPVHSEEGAG 576 Query: 518 IGLLNVHHRVKLL--YGEGLHIRRLEP-GTEIAFYI 550 IGL NVH R+ + GL IR + GT I+F + Sbjct: 577 IGLYNVHKRLTEMRVSEAGLSIRSDDQAGTSISFLL 612 >UniRef50_A6TN09 Signal transduction histidine kinase, LytS n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TN09_ALKMQ Length = 559 Score = 549 bits (1416), Expect = e-155, Method: Composition-based stats. Identities = 190/558 (34%), Positives = 332/558 (59%), Gaps = 11/558 (1%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 I +++++ ++ +++I + +I +FR+L+ K + + + + +F + T+S Sbjct: 2 IIEIIVSLANKLGIIIILAILISKIGIFRKLVTKKNITIIDKIILAVVFGAIGILGTYSS 61 Query: 64 VPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGC 123 VPV G++ N R++ VM GG+L GP VG++ G+IAG HRY+IDIGG TA+ C + +I+ G Sbjct: 62 VPVNGAIANTRVVGVMVGGLLGGPVVGVMAGMIAGGHRYVIDIGGFTALACAVATIIEGF 121 Query: 124 ISGWINLKIP-KAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL-GS 181 I G+ + I K+Q+W+ + G+ E + M ++++ A +V I +PM+L S Sbjct: 122 IGGYAHFYIKNKSQKWKYTLFIGIFAEIVQMAIILLIARPFGDAFTLVKIILLPMVLVNS 181 Query: 182 VCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VNSESLRKVCEIIRDDIH 240 + I + +++++ E E AA QA+ L IAN+TLP FR +N E ++V II + Sbjct: 182 IGISLFIGIIENIHQEYERIAAGQAEKTLKIANQTLPYFRQGLNEEVAKEVVNIIYHTVD 241 Query: 241 ADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGK--IIIKNNDEAHRTPE-- 296 AV ITN +LA+ G E ++ + +TR + G+ +I D P+ Sbjct: 242 VAAVTITNCKEILAHKGAEEDHHVPMCKLQTQSTRDVVISGEHRVIFHQRDIQCDQPKCQ 301 Query: 297 IHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMA 356 + S++++PL E+ V GTLK+Y + IT+ E+A+GL+Q+ STQ+E+SR + +++ Sbjct: 302 LKSVIIVPLKEREEVVGTLKLYKREENSITTLDVELALGLAQLFSTQIELSRLDYQKKLL 361 Query: 357 NKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDI 416 +AEL+ LQ++INPHFLFN +N I S ++++P A+QL+ +L+ R ++ + + +D+ Sbjct: 362 AEAELKTLQAQINPHFLFNTINTIVSFVQVDPTQAKQLLISLADLFRKSLS-NNQDMVDM 420 Query: 417 KKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKG 476 + E+ + Y+ IE+ARFGD+L V Y++ E + C +P L++QPLVENA++HGI P +G G Sbjct: 421 ETEIEHVASYLEIEKARFGDQLKVKYELQENITCKLPPLILQPLVENAVIHGILPKRGGG 480 Query: 477 VVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLH 536 + I + N V + + D G GI + + + + +GL+NV+ R+ LYGE Sbjct: 481 EIKILSKKLENCVLLEIVDNGLGISQERLLTILKPVIDSKSVGLMNVNKRLINLYGEAYC 540 Query: 537 IR---RLEPGTEIAFYIP 551 + ++ GT+I IP Sbjct: 541 LEVSSEVDHGTKIQVKIP 558 >UniRef50_Q4A009 Sensor protein lytS n=84 Tax=Bacilli RepID=LYTS_STAS1 Length = 591 Score = 547 bits (1409), Expect = e-154, Method: Composition-based stats. Identities = 171/581 (29%), Positives = 309/581 (53%), Gaps = 34/581 (5%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 + N+ + + +R L+++ + L+ I F+ ++++ + + IF F++ S ++G Sbjct: 1 MLNLFILLLERVGLIILIAYILMNINHFKTMMNEREK-RRSQWQLIIIFGCFSMISNFTG 59 Query: 64 VPVEG----------------SLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIG 107 + + G SL N R++ + G++ GP+V + VI+G++R + IG Sbjct: 60 IQIRGDEIINGTVYNHLDPDASLANTRVLTIGVSGLIGGPFVALAVAVISGMYR--VYIG 117 Query: 108 GVTAIPCFITSILAGCISGWINLKIPKAQRWRV---GILGGMLCETLTMILVIVWAPTTA 164 G A I+SI ISG+ K +A R+ G G E + M+ +++++ T Sbjct: 118 GADAYIYLISSIFIALISGYFGYKAMRANRYPTIVKGACIGGTTEIIQMLCILLFSDNTE 177 Query: 165 LGIDIVSKIGIPMI-LGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-H 222 +V I IPMI + S+ + ++ S ++E + A Q L +AN+TLP FR Sbjct: 178 HAWTLVKLIAIPMISINSIGTAIFLSIILSTIKQEEETRAIQTHDVLQLANQTLPYFRSG 237 Query: 223 VNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGK 282 +N +S +K EII + + AVAITN +L +VGV ++ I+ +++A+ G Sbjct: 238 LNEQSAKKAAEIILNLMRVSAVAITNRKDILTHVGVASDHHVAQKAIITNLSKRAIQSGT 297 Query: 283 IIIKNNDEA----HRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQ 338 + + E H + + +V+PL K V GTLK+Y+ + + + S +++A GL++ Sbjct: 298 LKEAYSSEEIGCNHPGCPLEAAIVVPLRVKNDVVGTLKLYFTNKYDVNYSDKQLATGLAE 357 Query: 339 IISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNL 398 I S+QLE+ +AE + AE+++LQ+++NPHF FNA+N IS+ IR++ + AR+L+ L Sbjct: 358 IFSSQLELGQAETQSALIRDAEIKSLQAQVNPHFFFNAINTISALIRIDSEKARELLLQL 417 Query: 399 SRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLI 457 S++ R N++ + I ++KEL Q++ Y+++EQAR+ D+ V +DID +P I Sbjct: 418 SQFFRSNLQGARNNTISLEKELQQVESYLSLEQARYPDRFNVSFDIDRTCYGALVPPFAI 477 Query: 458 QPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEA---NEMP 514 Q LVENAI H + K + + + + I+V D GHGI + ++++ + Sbjct: 478 QILVENAIKHAFKNRKYNNEIIVKAHKAQTGLVISVSDNGHGIPYEKLDKIGKTSVHSES 537 Query: 515 GNKIGLLNVHHRVKLLYG--EGLHIRRLEPGTEIAFYIPNQ 553 G L N++ R+ L+G L I GT+++ IP Sbjct: 538 GTGSALENLNRRLDGLFGYEASLQIHSDHQGTQVSCTIPYH 578 >UniRef50_C0Z808 Two-component sensor histidine kinase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z808_BREBN Length = 571 Score = 544 bits (1402), Expect = e-153, Method: Composition-based stats. Identities = 177/554 (31%), Positives = 312/554 (56%), Gaps = 15/554 (2%) Query: 7 MLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPV 66 MLL + + +++ + + ++ FR +++ + ++ ++ +F ++ T +G+ V Sbjct: 5 MLLGLLEDISVIAVIALIIGQLDYFRNIMYGKNN-WMRIVILSTLFGFLSVIGTENGLRV 63 Query: 67 EGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISG 126 +L N RI+ ++GG++ GP VG + G+I GIHRY IGG TA C I++++ G ++G Sbjct: 64 NDALANTRIVGAVAGGLIGGPVVGFLAGLIGGIHRY--SIGGFTAFACAISTVMNGYLAG 121 Query: 127 WINLKIPKAQ-RWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILGSV-CI 184 ++ K+ + +W+ +L G+ E + ++V++ A + +++ KI IP + ++ + Sbjct: 122 IVSTKMNMLRLKWQHIVLIGVTAELIQKVMVLLMAKPFSAALELEVKIAIPTTIMTIAGL 181 Query: 185 GFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDDIHADA 243 + Q+++ ++ S A A LAL IA++TLP R +N S +K E+IR+ DA Sbjct: 182 LLFTRVFQNLKMMQDQSGALGANLALSIASQTLPHLRTGLNEYSAKKTAELIREMAKVDA 241 Query: 244 VAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEA-HRTPEIHSMLV 302 VAIT+ + +L+ G N+ + + +N+ I + D A P + S+ Sbjct: 242 VAITDREKLLSAKGHELENHLQKETLCAQVAEAVLNHPTGIWCDKDFALPHPPRLKSINA 301 Query: 303 IPLWEKGVVTGTLKIYYCHAHQITSSLQE-MAVGLSQIISTQLEVSRAEQLREMANKAEL 361 L+ + GTL+ YY + TS E + GL++++S Q+E++ E +M +AE+ Sbjct: 302 ASLYHQNQKIGTLQFYYKTSSSKTSQTNEKLVDGLAKLLSVQIELAEIEHQAKMRKQAEV 361 Query: 362 RALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELY 421 ALQ++INPHFLFN L I S R +PD AR LI +LS R N++ K + +++EL Sbjct: 362 SALQAQINPHFLFNTLGTIMSYCRTDPDQARNLIGHLSDIFRRNLKSKGNHH-SLQEELD 420 Query: 422 QIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTI 480 IK Y+ IE+ RF ++L V +IDE + C +P L +QP+VENAI HG+ P ++TI Sbjct: 421 GIKSYLEIEKVRFSNRLKVNMEIDETLLECKLPVLTLQPIVENAIHHGLSPKVSDCLLTI 480 Query: 481 SVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGE--GLHIR 538 V + V+I++ D G GI + + + ++ G IGL+NVH R++ +YG+ GL I+ Sbjct: 481 RVEPYDHEVKISIEDNGVGISEERLAEIWNSQSKG--IGLINVHSRLQSIYGKKYGLTIQ 538 Query: 539 RLEP-GTEIAFYIP 551 GT ++F P Sbjct: 539 SQPGLGTVVSFVAP 552 >UniRef50_B8DLB4 Signal transduction histidine kinase, LytS n=2 Tax=Desulfovibrionales RepID=B8DLB4_DESVM Length = 603 Score = 537 bits (1383), Expect = e-151, Method: Composition-based stats. Identities = 175/596 (29%), Positives = 297/596 (49%), Gaps = 44/596 (7%) Query: 2 HEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTW 61 + + + + R L+L F ++ + ++ + + A+F +F + T+ Sbjct: 7 PHVPELFITLTQRFGLLLAGGFAIMTVAPLDKVGPGRSRPLWATALLVAMFGMFGILGTY 66 Query: 62 SGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILA 121 +G V S N+R + V++ G+ GP VG G+IA HRYLID+GG +A+PC + ++ Sbjct: 67 TGNFVFQSFANLRAMGVITAGLFGGPVVGAGAGIIAAGHRYLIDVGGFSALPCGLATLSE 126 Query: 122 GCISGWINLKIP-KAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL- 179 G ++G + + P + W + G++ ET M LV+ A +++V I +PMIL Sbjct: 127 GILAGLVAWRFPERRLDWATALTLGLIGETYHMGLVLWLAEPFTEAVELVRVISLPMILI 186 Query: 180 GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDD 238 ++ V ++ ++ + QA+ L IAN+TL R + S + EII D+ Sbjct: 187 NAMGAALFVQALRLQLHFRDLRDSTQARQILSIANRTLSHLRSGLTRASAQATAEIILDE 246 Query: 239 IHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRT---- 294 H AVA+T + VLA+VG G+ ++ G + TR+ G+ + + ++ Sbjct: 247 THVAAVALTGGELVLAHVGAGDDHHMPGFQVRTMATRRVAETGEPLFVRDRDSIGCRQPG 306 Query: 295 PEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLRE 354 + +++PL + G + G LK+Y + + E+A GL+ + STQ+E+ + Sbjct: 307 CPLTDAIIVPLRKGGQILGCLKLYGTKNRPLDQTRFELAKGLADLFSTQIELEEIGIKNQ 366 Query: 355 MANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQI 414 + +AE+R LQ++INPHFLFN+LNA++S R P AR LI +L+RY+R N++ I Sbjct: 367 LIARAEIRRLQAQINPHFLFNSLNAVASFCRTAPGQARDLILDLARYMRRNLDSSRGA-I 425 Query: 415 DIKKELYQIKDYIAIEQARFGDKLTVIYDIDE-EVNCCIPSLLIQPLVENAIVHGIQPCK 473 + +EL Q++ Y+ IEQARFGD++ D+ + IP LLIQPLVEN++ HGI + Sbjct: 426 RLSEELEQVRSYLVIEQARFGDRIRADIDLAPGTADWLIPPLLIQPLVENSVRHGILARE 485 Query: 474 GKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMP------------------- 514 G+V +S G+ + + V D G G+D + A + Sbjct: 486 EGGLVRLSAHADGDHLLVTVEDDGAGMDDDTRNAILAPDASDLSPHMYVEARNEALYEAQ 545 Query: 515 -------------GNKIGLLNVHHRVKLLYGEGLHIR---RLEPGTEIAFYIPNQR 554 + IG N + R+ +YG +R GT I+F IP Q+ Sbjct: 546 PGQTCSDTMVESLRDGIGARNCNQRLMQMYGPSYAMRIDSEPGRGTRISFRIPRQQ 601 >UniRef50_A4J8Q8 Signal transduction histidine kinase, LytS n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J8Q8_DESRM Length = 568 Score = 533 bits (1374), Expect = e-150, Method: Composition-based stats. Identities = 191/568 (33%), Positives = 307/568 (54%), Gaps = 30/568 (5%) Query: 11 VFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPV---- 66 + R ++ F R + FR LL + K L + IF +F + T++G+ V Sbjct: 1 MAQRMGFIVAIAFLFTRWQGFRSLLENRP-TLKGKLYLGVIFGIFGIIGTYTGITVTPRE 59 Query: 67 -----------EGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCF 115 E ++ N R I VM GG+L GP G++ G+IAG+HR + +GG T + C Sbjct: 60 VQNLFPGTLAYEDAIANSRAIGVMVGGLLGGPLTGLLAGLIAGVHR--MSMGGFTDMACG 117 Query: 116 ITSILAGCISGWINLKIP-KAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIG 174 I+++ G ++G I K+ K V ++ G+ E M ++++ A + +V I Sbjct: 118 ISTVYEGLLAGVIYYKMKQKTLTPGVALMTGLAGEIGQMAIILMVAQPFYKALALVKIIA 177 Query: 175 IPMIL-GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVC 232 +PMIL S+ I + +VQ+V + A QA+ AL IA+KTL R +N ES Sbjct: 178 MPMILANSLGIALFIAIVQTVVENERTIGAIQAQRALAIADKTLAHLRKGLNHESALATA 237 Query: 233 EIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAH 292 +II ++ A AVAITN + +LA+VG G ++ G ++ TR+ + +G++ I + + Sbjct: 238 QIIYEESCAGAVAITNQEMILAHVGEGSDHHHPGAPILTKVTREVLQHGQLAIAASPQEI 297 Query: 293 RT----PEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSR 348 + S +V+PL+ + GTLK+Y Q+ + E+A GL+Q+ STQLE+ Sbjct: 298 LCTNVHCALQSAVVVPLYNGKGIVGTLKLYSVRRQQLDRLMVELARGLAQLFSTQLELGE 357 Query: 349 AEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIEL 408 AE+ + AE++ALQ++INPHFLFNALN + S IR PD AR ++ +L Y+R N++ Sbjct: 358 AEKQARLVQDAEIKALQAQINPHFLFNALNTVVSLIRTKPDEARSVLIHLGTYIRQNLKS 417 Query: 409 KDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVH 467 ++ +++ EL ++ Y+A+ QARF +L V +I ++ IP L +QPLVENA+ H Sbjct: 418 SLNKWTNLETELKHVEAYLAVVQARFSHRLRVEMNIPLTLHGVVIPPLTLQPLVENAVQH 477 Query: 468 GIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIER-VEANEMPGNKIGLLNVHHR 526 G + I + +VRI+V D G GI+ +E ++A + IGL+NVH R Sbjct: 478 GFPRITENSSIIIEAVQQEKQVRISVTDNGVGIERDRVEELLKAEKRSDGGIGLINVHSR 537 Query: 527 VKLLYGE--GLHIRR-LEPGTEIAFYIP 551 + ++G GL I GT + F IP Sbjct: 538 LISIFGPQAGLSIHSEPGAGTRVEFSIP 565 >UniRef50_C5TXS9 Signal transduction histidine kinase, LytS n=2 Tax=Desulfovibrio RepID=C5TXS9_DESVU Length = 627 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 162/483 (33%), Positives = 268/483 (55%), Gaps = 9/483 (1%) Query: 1 MHEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFST 60 + I M + + +R L+L F ++ + +L S + + +FSLF + T Sbjct: 4 VPYIPPMFITLSERFGLLLAGGFAIMTLAPLDKLGPGRTRSWRATALLVVLFSLFTILGT 63 Query: 61 WSGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSIL 120 ++G V S N+R + ++ G+ GP VG +TG+IAG HRY ID+GG +A+PC + + L Sbjct: 64 YNGNIVFQSFANLRAMGAVTAGLFGGPMVGALTGLIAGGHRYFIDVGGFSAVPCGLATFL 123 Query: 121 AGCISGWINLKIP-KAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMI- 178 G +G + P ++ W + + E + M LV+ A A +D+V IG+PMI Sbjct: 124 EGLAAGLFAWRFPSRSLDWGTAMTFAAVGEAVHMCLVLGLARPYAQAVDLVEVIGLPMIL 183 Query: 179 LGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRD 237 L V V ++ ++ + QA+ L IAN+TLP R +++ S R EII D Sbjct: 184 LNGVGAAIFVQALRMQMHFRDLRDSSQARQILSIANRTLPHLRAGLSAASARATAEIILD 243 Query: 238 DIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYG-KIIIKNNDEAHRT-- 294 + AVA+T+ D V+A+VG +++ G + TR+ G + + +DE Sbjct: 244 ETRVAAVALTSNDMVMAHVGAASDHHRAGHSVCTQATRRVATDGIPLFVTGHDEIGCQLE 303 Query: 295 -PEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLR 353 + S +++PL + + G LK+Y + +L E+A GL+ + +TQ+E+ Sbjct: 304 ACPLCSAIIVPLRKGDTILGCLKLYGTKDRPLDQTLFELAKGLADLFATQIELEDIGIKN 363 Query: 354 EMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQ 413 ++ +AE+R LQ++INPHFLFN+LN ++S R P AR+LI +L+RY+R N++ E Sbjct: 364 QLLARAEIRRLQAQINPHFLFNSLNTVASFCRTAPGQARELILDLARYMRRNLDTS-REA 422 Query: 414 IDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPC 472 I + +E+ QI+ Y+ IE+ARFG+++ + DID E +C +P LLIQPLVEN++ HGI Sbjct: 423 IHLAEEVEQIRAYLVIEKARFGERIRAVIDIDPETEHCLVPPLLIQPLVENSVRHGILGN 482 Query: 473 KGK 475 + Sbjct: 483 EEG 485 >UniRef50_Q814J0 Sensor protein lytS n=83 Tax=Bacillaceae RepID=LYTS_BACCR Length = 589 Score = 530 bits (1366), Expect = e-149, Method: Composition-based stats. Identities = 199/593 (33%), Positives = 328/593 (55%), Gaps = 41/593 (6%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 + N++L + +R L++I F L I+ FR LLHK + L + IFS+F + S ++G Sbjct: 1 MLNLVLMMIERVGLIVILGFLLSHIKTFRRLLHKQDGYV-DKLKLICIFSVFTIVSNYTG 59 Query: 64 VPVEGS----------------LVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIG 107 + + G+ + N RI+ V G+L GP VGI G IAGIHRY+ +G Sbjct: 60 IEIAGNTIMNENWLQGVSSSSTIANTRIMGVGISGLLGGPIVGIGVGSIAGIHRYM--LG 117 Query: 108 GVTAIPCFITSILAGCISGWINLKIPKAQR---WRVGILGGMLCETLTMILVIVWAPTTA 164 G TA+ C I+SILAG I+G+I K R + + + +L MI++++ Sbjct: 118 GTTALSCAISSILAGVITGYIGYIFKKYNRTITPKFSAILSVFIVSLEMIMILLIVED-- 175 Query: 165 LGIDIVSKIGIPMIL-GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH- 222 G+ IV I IPMIL S ++ ++Q++ ++E + A Q L IA+KTLP FR Sbjct: 176 -GMSIVKTIAIPMILVNSFGSFILLSMIQAILRQEENAKALQTHKVLRIADKTLPYFRQG 234 Query: 223 VNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGK 282 + ES + V +II DAV++T+T+ +LA+VG+ ++ I+ +++ ++ G+ Sbjct: 235 LTEESCKHVAQIIHRFPGTDAVSLTDTEKILAHVGLASDHHIPSHSLITGLSKEVLHTGQ 294 Query: 283 IIIKNNDE----AHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQ 338 I+ + E H + + +VIPL G GTLK+Y+ + +Q++ +E+A GL++ Sbjct: 295 IMKAKSREVINCQHEGCPLQAAIVIPLTSHGNTIGTLKLYFKNPNQLSRVEEELAEGLAK 354 Query: 339 IISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNL 398 I STQLE+ AE ++ AE++ALQ++INPHFLFNA+N +S+ R + + AR+L+ L Sbjct: 355 IFSTQLELGEAELQSKLLQDAEIKALQAQINPHFLFNAINTVSALCRTDVEKARKLLLQL 414 Query: 399 SRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLI 457 S Y R N++ I +++EL ++ Y+++EQARF +K V I++E+ +P ++ Sbjct: 415 SVYFRCNLQGARQLLIPLEQELNHVQAYLSLEQARFPNKYEVKMYIEDELKTTLVPPFVL 474 Query: 458 QPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEA---NEMP 514 Q LVENA+ H + V + V E V V+D G GI+ + +E++ + Sbjct: 475 QLLVENALRHAFPKKQPVCEVEVHVFEKEGMVHFEVKDNGQGIEEERLEQLGKMVVSSKK 534 Query: 515 GNKIGLLNVHHRVKLLYGEG--LHIRR-LEPGTEIAFYIPNQRTPVASQATLL 564 G L N++ R+ L+G+ LHI L GTEI F IP + V + ++ Sbjct: 535 GTGTALYNINERLIGLFGKETMLHIESELNEGTEITFVIPKK---VGEEEQIV 584 >UniRef50_C4XJP3 Sensor protein LytS n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XJP3_DESMR Length = 605 Score = 528 bits (1360), Expect = e-148, Method: Composition-based stats. Identities = 175/561 (31%), Positives = 295/561 (52%), Gaps = 15/561 (2%) Query: 2 HEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTW 61 E+ + + + R L+L F ++ + F + AVT +F +F + T+ Sbjct: 8 PEVPGLFVHLSQRFGLLLAGGFAIMTLAPFERMGLGQKRPAWATAAVTVLFGVFGILGTY 67 Query: 62 SGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILA 121 +G V S N+R + V++ G+ GP VGI G+IAG HRYLID+GG +A+PC + + L Sbjct: 68 TGNAVFHSYANLRAMGVITAGLFGGPVVGIGAGLIAGGHRYLIDVGGFSALPCALATFLE 127 Query: 122 GCISGWINLKIP-KAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL- 179 G +G I + P ++ W + G++ ET+ M LV+ + +++V IG PMI+ Sbjct: 128 GAAAGLIARRFPGQSLDWGWAMALGLVGETVHMGLVLALSRPFGEALELVKVIGAPMIVI 187 Query: 180 GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDD 238 ++ ++ +E + +A+ L IA++T+P R + ES + IIR + Sbjct: 188 NAMGAAIFTRALKLQRSLRERQDSTEARRILSIASQTVPHLRGGLTPESAQATAAIIRKE 247 Query: 239 IHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRT---- 294 AVAIT +LA+VG G+ ++ G+ + + TR + G + + E+ Sbjct: 248 TGVAAVAITGDSTILAHVGAGQDHHLAGEPWRTRATRLSYESGAALFLRDQESIGCALPD 307 Query: 295 PEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLRE 354 + +++PL + + G LKIY A + L E+A GL+ + STQLE+ + Sbjct: 308 CPLREAIIVPLRKGAAIRGCLKIYGTKARPLDQPLFELAKGLADLFSTQLELEDIGIKNQ 367 Query: 355 MANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQI 414 + AE+ LQ++INPHFLFN+LN I+S R P AR+L+ +L+RY+R N++ I Sbjct: 368 LLAHAEISRLQAQINPHFLFNSLNTIASFCRTAPGQARELLLDLARYMRRNLDSSRG-LI 426 Query: 415 DIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCK 473 + +E+ Q++ Y+AIEQARFGD++ D++ + +P LLIQPLVEN++ HG+Q Sbjct: 427 RLSEEMEQVRSYLAIEQARFGDRIVSEIDLEPGCEDWLLPPLLIQPLVENSVRHGLQGRP 486 Query: 474 GKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGN---KIGLLNVHHRVKLL 530 G VT++V + + V D G G+ P+ R+ + + G+ +G N + R+ L Sbjct: 487 EGGRVTVTVRRRDGHLWVEVADEGLGMSPETRARILSPDAAGSLTEGVGARNTNQRLVQL 546 Query: 531 YGEGLHI---RRLEPGTEIAF 548 +G + G I F Sbjct: 547 FGHDYALCIESAPGEGARIVF 567 >UniRef50_A1HLU7 Signal transduction histidine kinase, LytS n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HLU7_9FIRM Length = 560 Score = 525 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 180/568 (31%), Positives = 301/568 (52%), Gaps = 21/568 (3%) Query: 1 MHEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFST 60 M I +L + AL+ I + R+ R L S + + + + +F F+ F Sbjct: 1 MPNIGPLLWDIVRNVALVGIGAYLTTRLPTIRRTLTASEYRLLDRIILAMVFGAFSAFGN 60 Query: 61 WSGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSIL 120 W G+PV GS N RI+ ++GG+L GP VGI G+I I RY + GG T + +I+ Sbjct: 61 WIGIPVMGSFANTRIVGPVAGGLLGGPLVGIGAGIIGAIPRYFM--GGFTMWAAVLANIV 118 Query: 121 AGCISGWINLKIPKAQ-RWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMI- 178 AGCISG ++ K + +V + +LCE + +LV+ + + ++ I +P I Sbjct: 119 AGCISGLVHKKCGAQRINLKVALATALLCEIVLKVLVLTLSKPFSAAWELEKVIALPTIT 178 Query: 179 LGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLF-RHVNSESLRKVCEIIRD 237 S+ +G + +V+ V E+E + AR A+ A+ + +T + +N+++ V +II Sbjct: 179 ANSLAVGLFIYIVRDVFAEQEKAQARSAQQAIRMLQQTSGFMHKGLNNDTAGNVAQIIYR 238 Query: 238 DIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNND----EAHR 293 + +A AVAIT+T+ VLA+VG G +++ G ++ T+QA+ + II NN + Sbjct: 239 ETNAAAVAITDTEKVLAFVGAGADHHRPGQPILTGATKQAIKDRRTIIINNKNEVGCPDK 298 Query: 294 TPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLR 353 ++ +++ +PL + G++K+Y I+S E+ G++ +S QL + + + Sbjct: 299 GCQLTAVVAVPLIVSDELVGSIKLYKSGNEVISSYEAELIRGIADFLSLQLAQRKLVEQQ 358 Query: 354 EMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQ 413 + +AE L+++INPHFLFN L I + R++P AR LI +LS +LR + +++E Sbjct: 359 MLLAQAEYNMLKAQINPHFLFNTLGTIRAMTRIDPSAARALIKDLSDFLRKVLN-REEEI 417 Query: 414 IDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPC 472 I +++EL ++ Y+ I+ RF D+L I EE ++C +P +QPLVENA+ HG+ P Sbjct: 418 ISLREELETVRTYVRIQCERFQDRLRFFEHIPEELLDCRVPVFSLQPLVENAVKHGVSPK 477 Query: 473 KGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYG 532 K G V + + + + IAV D G G A IGL NVH R+++LYG Sbjct: 478 KTGGTVVLRAWKDQDDLCIAVEDDGVGFSA-------AKRETSGGIGLYNVHKRLQILYG 530 Query: 533 E--GLHIRRLE-PGTEIAFYIPNQRTPV 557 GL I E GT + +P R V Sbjct: 531 NRYGLRIESAEKEGTRVIIRLPEVRAGV 558 >UniRef50_B1YHT0 Signal transduction histidine kinase, LytS n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YHT0_EXIS2 Length = 588 Score = 525 bits (1352), Expect = e-147, Method: Composition-based stats. Identities = 165/588 (28%), Positives = 300/588 (51%), Gaps = 34/588 (5%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 +F ++ + +R +M+I F L + R LL K + + + IF+ + + S ++G Sbjct: 1 MFELIPFLLERLGIMIILAFILAQWGPTRRLL-KQPEAGWQFGLLILIFATYGILSNYTG 59 Query: 64 VPVE----------------GSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIG 107 V V+ ++ N R + V+ G+L GP G ITG++ GIHRY +G Sbjct: 60 VKVDLAKFLPHTWLEQVDGTSAIANTRTMIVVISGLLAGPIGGTITGLLVGIHRY--TLG 117 Query: 108 GVTAIPCFITSILAGCISGWI--NLKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTAL 165 G TA C +++++AG +SG + + R + I M L+++++ Sbjct: 118 GFTAFACALSTVVAGGVSGLLRPYWRDRLGSRALLPICLTGFLMVFEMSLILLFSDPFPA 177 Query: 166 GIDIVSKIGIPM-ILGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLF-RHV 223 ++++ I +PM ++ + + + +++ E+E AR+A+ +L IA+ TLP R + Sbjct: 178 ALELIQFIFLPMTVVNVLGVWLFLSIIRLAAREEEHVRAREAERSLHIADLTLPHLTRGL 237 Query: 224 NSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKI 283 ++ V +I+ ADAV++T+ +LA++GVG ++Q+G + + T + G++ Sbjct: 238 TIQTAEAVADILLQQTRADAVSLTDQSVILAHIGVGSDHHQSGGHWTTRPTEHVLTDGQL 297 Query: 284 IIKNNDEAHRTP----EIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQI 339 + + + P + + ++ PL GTLK+YY H + + E+ GL+++ Sbjct: 298 RLVTDRDEIGCPKADCPLQAGIIAPLTIGETTIGTLKVYYPHPELLDAVEVELIEGLAKL 357 Query: 340 ISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLS 399 STQL + +AE+ + AE+RAL+++I+PHFLFNA+N I + R + + AR L+ LS Sbjct: 358 FSTQLALGKAERQAGLLKDAEIRALEAQIHPHFLFNAINTIYALCRTDVEQARTLLLELS 417 Query: 400 RYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQ 458 + R N++ +I ++KEL I+ YI++E ARF + V D+++ +P ++Q Sbjct: 418 TFFRSNLQGARSTKIPLQKELEHIEAYISLEAARFPSRPFVDIDLEDGTEQLLVPPFVLQ 477 Query: 459 PLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN--EMPGN 516 PL+ENA H P G V ++ +++ + V D G GID + + R+ E G Sbjct: 478 PLIENAFQHAFSP-GQTGYVGVTAWLTADQLVLEVVDNGRGIDAERLTRLGREVVESNGT 536 Query: 517 KIGLLNVHHRVKLLYGEGLHIR---RLEPGTEIAFYIPNQRTPVASQA 561 L N R+K LY E R + GT I ++P + S A Sbjct: 537 GTALFNTAERIKSLYAENGSFRLTSQPGEGTTITIHLPIETGKEVSHA 584 >UniRef50_Q5HLG3 Sensor protein lytS n=5 Tax=Staphylococcus epidermidis RepID=LYTS_STAEQ Length = 591 Score = 522 bits (1345), Expect = e-146, Method: Composition-based stats. Identities = 166/583 (28%), Positives = 315/583 (54%), Gaps = 34/583 (5%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 + N+ + + +R L+++ + L+ I F+ ++ + + + IF +F++ S ++G Sbjct: 1 MLNLFILLLERVGLIILLAYILMNINHFKTMMSERDK-WRSKFQLIIIFGIFSMISNFTG 59 Query: 64 VPVEG----------------SLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIG 107 + +E S+ N R++ + G++ GPWV II G+I+G+ R + IG Sbjct: 60 IEIENGHIVSGDIYYHLSKDASMANTRVLTIGVSGLIGGPWVAIIVGIISGLCR--LYIG 117 Query: 108 GVTAIPCFITSILAGCISGWINLKIPKAQRW---RVGILGGMLCETLTMILVIVWAPTTA 164 G A I+SI+ ISG+ + K + + G + G + E + M ++++ Sbjct: 118 GADAYTYLISSIVIAIISGYFGHQTIKQNTYPSIKKGAIIGAITEIIQMGCILLFTNNLH 177 Query: 165 LGIDIVSKIGIPMIL-GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-H 222 I +VS I +PMI+ S+ + ++ S ++E A Q L +AN+TLP FR Sbjct: 178 HAITLVSFIALPMIIINSLGTAIFLTIILSTIKQEEQMRAVQTHDVLQLANETLPYFRSG 237 Query: 223 VNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGK 282 +N +S ++ EII + AVAITN +L ++G G ++ + I+ +++ + GK Sbjct: 238 LNEKSAQQAAEIILKLMQVSAVAITNKKDILTHIGAGSDHHVARKEIITDLSKEVIQSGK 297 Query: 283 IIIKNNDEA----HRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQ 338 + + + E H + +V+PL+ V GTLK Y+ + I++S Q++A GL+ Sbjct: 298 LKVAHTREGIGCHHPNCPLEGAIVVPLYIHNEVAGTLKFYFTDNNIISTSDQQLAKGLAN 357 Query: 339 IISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNL 398 I S+QLE+ +AE ++ AE+++LQ+++NPHF FNA+N IS+ +R++ + AR+L+ L Sbjct: 358 IFSSQLELGQAEMQGQLLKDAEIKSLQAQVNPHFFFNAINTISALVRIDSEKARRLLIQL 417 Query: 399 SRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLI 457 S++ R N+ + I ++KEL Q+ Y+++EQAR+ ++ + Y ID++ + IP +I Sbjct: 418 SQFFRSNLNGARNNTITLQKELQQVAAYLSLEQARYPNRFNIHYRIDDQCQDALIPPFII 477 Query: 458 QPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNK 517 Q LVEN+I H + K + + V+ + + I+V+D G GI ++ + + Sbjct: 478 QILVENSIKHAFKNRKKNNHIDVDVSMKQDYLSISVQDNGQGIPADQLDTIGYTTVTSTT 537 Query: 518 I---GLLNVHHRVKLLYG--EGLHIRRLEPGTEIAFYIPNQRT 555 L+N++ R+ L+G L+I+ + GT ++ IP + + Sbjct: 538 GTGNALVNLNKRLTGLFGTTSALNIQSSQSGTTVSCLIPYKSS 580 >UniRef50_C5ETQ5 Signal transduction histidine kinase n=5 Tax=Clostridiales RepID=C5ETQ5_9FIRM Length = 565 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 175/549 (31%), Positives = 284/549 (51%), Gaps = 12/549 (2%) Query: 21 CLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPVEGSLVNVRIIAVMS 80 L +I + R +L + A+ IF L ++ ST++G+ +G++VN R+I V++ Sbjct: 19 IATMLTKIPVVRSMLLGENNPIGSRAALAVIFGLVSIVSTYTGMRAQGAIVNTRVIGVLA 78 Query: 81 GGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISGWINLKIPKAQRWRV 140 G+L GP+VG+ +I G+HRYL DIGG TA+ C I++ + G I + + + Sbjct: 79 AGLLGGPYVGMGAAIIGGLHRYLFDIGGFTAVSCAISTFVEGLIGSAFSRRFKAGKIDNT 138 Query: 141 G-ILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMI-LGSVCIGFIVLLVQSVEGEK 198 G L L E M++++ + +++V I PMI + ++ + + V E+ Sbjct: 139 GIFLITALAEVCQMVIILFISKPFPAALELVGLIAFPMITMNALGMVAFIGTFSIVFMEE 198 Query: 199 EASAARQAKLALDIANKTLPLFRH--VNSESLRKVCEIIRDDIHADAVAITNTDHVLAYV 256 ++ A + +LAL I ++LP R ++ + EII + AV IT+T VLA Sbjct: 199 DSQFAEKMRLALGIVEQSLPHLRKGLYSTRDMEAAAEIIYNSTSCAAVMITDTQKVLAMK 258 Query: 257 GVGEHNYQNGDDFISPTTRQAMNYGK---IIIKNNDEAHRTPEIHSMLVIPLWEKGVVTG 313 G +N G + P + + D + + H ++ PL E G Sbjct: 259 GEARYNDLKGGALLKPILESIHDRKTTTFTCAEKPDPLYHILKNHIIVTAPLIEMDKPIG 318 Query: 314 TLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFL 373 +L + + A L+++ STQLE+S + +++ KAE +ALQS++NPHFL Sbjct: 319 SLTMVVRKHWVTSQPNLNFASELARLFSTQLELSDLDYQKQLRRKAEFKALQSQVNPHFL 378 Query: 374 FNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQAR 433 +NALN IS R NPD AR+LI LS Y R +E D +++ ELY + Y+ +EQAR Sbjct: 379 YNALNTISCVCRENPDRARELILTLSAYYRQTLE-NDQYMLNLHTELYHVSSYLELEQAR 437 Query: 434 FGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAV 493 F +KL V D+++++NC +PS ++QPLVENA+ +G +G V+I + V I+V Sbjct: 438 FEEKLQVDMDVEDDLNCLVPSFILQPLVENAVRYG-ADARGMRTVSIQARTIDDSVEISV 496 Query: 494 RDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGE--GLHIRRLEPGTEIAFYIP 551 D G GI +I ++ + E G +GL NVH R+K +YGE GL I G+ + F +P Sbjct: 497 SDKGPGIPKDIIIQMYSGEGRG-GVGLKNVHRRLKSIYGEDNGLKIETSSAGSRVWFRVP 555 Query: 552 NQRTPVASQ 560 Sbjct: 556 RTTGKDKEN 564 >UniRef50_A5VJZ2 Signal transduction histidine kinase, LytS n=13 Tax=Lactobacillaceae RepID=A5VJZ2_LACRD Length = 587 Score = 510 bits (1315), Expect = e-143, Method: Composition-based stats. Identities = 176/593 (29%), Positives = 304/593 (51%), Gaps = 41/593 (6%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 + + + + +R L++I F L+ + LFR LL S K + +T +FS+FA+ + +G Sbjct: 1 MIYLTILMAERVGLIIILAFLLVSVPLFRRLLFNQTISAK--IQLTILFSIFAIMANMTG 58 Query: 64 VPV-----------------EGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLI-- 104 + + S+VN RI+ V GI+ GPWVG + G++AG+HR + Sbjct: 59 IEIDANNQLHNKIILTAISTNDSIVNARILGVSVAGIIGGPWVGSLVGLVAGVHRIIQGA 118 Query: 105 DIGGVTAIPCFITSILAGCISGWINLKIP---KAQRWRVGILGGMLCETLTMILVIVWAP 161 + G +P +S+L G +SG++ K G + G+L E++ M+ +++++ Sbjct: 119 PLQGWFYVP---SSVLIGALSGFLYHDRKSYFKVMTPWHGFIVGILMESIQMLFILLFS- 174 Query: 162 TTALGIDIVSKIGIPMIL-GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLF 220 G +V I +PMIL S+ + ++ ++E A Q L + N+TLP F Sbjct: 175 --PTGWALVKYIALPMILVNSLGTSIFLSIISMYLHQEEELRAMQTHSVLQLTNETLPYF 232 Query: 221 RH-VNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMN 279 R +N S ++V +II+ + DAV+IT+ +LA++G G+ ++ G+ + + + Sbjct: 233 RQGLNKSSAQQVVKIIKKYTNFDAVSITDRQRILAHIGAGDDHHIPGNRLETSLSSNVIK 292 Query: 280 YGKIIIKNNDEAHRT----PEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVG 335 G+I I NN + + + +V PL V GTLK+YY +T ++A+G Sbjct: 293 TGQIKIANNSKMIGCIDPNCPLEAAIVAPLRIGNEVIGTLKMYYTDQWHLTPVEIQLAIG 352 Query: 336 LSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLI 395 L +I + Q+ + AE ++ A+++ALQ++INPHF FNA+N IS+ +R + + AR+L+ Sbjct: 353 LCEIFANQIALGEAEVQAQLVRDAKIKALQAQINPHFFFNAINTISAILRRDQEKARELL 412 Query: 396 FNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSL 455 LS Y R N+ + +I + +E Q+ Y+ +EQ RF K + +D E + +P Sbjct: 413 LQLSNYFRANLIGARETEITLGQERSQVDAYLELEQTRFPQKYNITFDQQVENDVYLPPF 472 Query: 456 LIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN---E 512 IQ LVENA+ H K V I++ + G R+ I V D G GI P+++ ++ Sbjct: 473 TIQVLVENALKHAFGARKDHNNVQITIKQLGARLAIQVADNGEGIAPELLPKLGKEPLTS 532 Query: 513 MPGNKIGLLNVHHRVKLLYGE--GLHIRRLEPGTEIAFYIPNQRTPVASQATL 563 G+ L N++ R+ LY E L I GT+I +P A +L Sbjct: 533 SKGSGNALYNLNQRLIGLYDERSALQITSSNKGTKIKISLPYHTKEGADNESL 585 >UniRef50_Q7P590 Autolysin sensor kinase n=10 Tax=Fusobacterium RepID=Q7P590_FUSNV Length = 558 Score = 509 bits (1312), Expect = e-143, Method: Composition-based stats. Identities = 221/550 (40%), Positives = 341/550 (62%), Gaps = 15/550 (2%) Query: 10 AVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPVEGS 69 + I FF IRI ++ +A + K+++A++ FSL ++ T+ G+ G+ Sbjct: 8 HLISNIGCSAIIAFFFIRIDKANIIIKSNAKTKKDIIALSFFFSLLSISGTYIGLNFNGA 67 Query: 70 LVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISGWIN 129 ++N R + V++GGIL GP+V IITG++AGIHR +++G TAIPC I +I G ++ +++ Sbjct: 68 ILNTRNVGVIAGGILGGPYVAIITGLVAGIHRAFVNLGRETAIPCAIATITGGFLTAYVH 127 Query: 130 LKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMI-LGSVCIGFIV 188 I + G + E L+M L+++ L +IV+ +PM+ + S+ ++ Sbjct: 128 RFIKSKDKIFFGFFLACVVENLSMGLILIILKDKILAQNIVANFYVPMVFMNSIGSSVLI 187 Query: 189 LLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIHADAVAITN 248 LLV+ + + E A RQAKLAL+IANKTLP FR +E+L +VC+II +D+ A A ITN Sbjct: 188 LLVEDIIQKSELIAGRQAKLALEIANKTLPHFRE--TENLSEVCKIIAEDLGAKATVITN 245 Query: 249 TDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGK--IIIKNNDEAHR-----TPEIHSML 301 ++A + + D S TR+ + G+ ++IK +DE +P I S + Sbjct: 246 KKEIIAGFSFDK-DKIKKADIKSNNTRKVLKTGETMLVIKEDDEIIEDFLDISPHIKSCI 304 Query: 302 VIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAEL 361 ++PL EK ++GTLKI++ A +IT + + +GLS +ISTQ+E+S+ E L + +EL Sbjct: 305 ILPLKEKNDISGTLKIFFDTAEKITDKNRYLMIGLSHLISTQMEISKVENLISLLKYSEL 364 Query: 362 RALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELY 421 +ALQS+INPHFLFN LN ++S IR NP+ AR++ +LS YLRYN++ +++ KEL Sbjct: 365 KALQSQINPHFLFNVLNTMTSLIRTNPEKAREVTIDLSNYLRYNLDNNVKS-VELIKELN 423 Query: 422 QIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTI 480 Q+ YI IE+ RFGDKL +IYD+DE + N IPSL+IQPLVEN+I HGI + G V I Sbjct: 424 QVNTYIKIEKVRFGDKLNIIYDVDESLYNFQIPSLIIQPLVENSIKHGILKKRDNGCVKI 483 Query: 481 SVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRRL 540 + + G + + + D G GI+ +I+ + ++ IGL NVH R+KLLYGEGL+I++L Sbjct: 484 IIKKIGKDIEVIIEDDGIGIEQTIIDNL--DKQIKENIGLKNVHQRLKLLYGEGLNIKKL 541 Query: 541 EPGTEIAFYI 550 E GT I F I Sbjct: 542 EQGTRIKFKI 551 >UniRef50_C3WH60 Autolysin sensor kinase n=4 Tax=Fusobacterium RepID=C3WH60_9FUSO Length = 559 Score = 506 bits (1305), Expect = e-142, Method: Composition-based stats. Identities = 223/551 (40%), Positives = 339/551 (61%), Gaps = 16/551 (2%) Query: 10 AVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPVEGS 69 + I FF I+I ++ A S K+++A++ FSL ++ T+ G+ G+ Sbjct: 8 HLISNIGCSAIIAFFFIKIDKANIIIKSKAKSKKDVIALSFFFSLLSISGTYIGLNFNGA 67 Query: 70 LVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISGWIN 129 ++N R + V++GG+L GP+V +TG+IAGIHR ++++G TAIPC I +I+ G ++ +++ Sbjct: 68 ILNTRNMGVVAGGLLGGPYVAALTGLIAGIHRAIVNLGRETAIPCAIATIIGGFLTAYVS 127 Query: 130 LKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMI-LGSVCIGFIV 188 R L + E L+M L+++ AL IV IPM+ + SV ++ Sbjct: 128 RFAKNKDRMFFAFLLAFVVENLSMALILLIQKDKALAQSIVKNFYIPMVFMNSVGAAVLI 187 Query: 189 LLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIHADAVAITN 248 LLV+ + + E A QAKLAL+IANKTLP FR N+E+L +VC+II + + A A IT+ Sbjct: 188 LLVEDIIQKSELIAGSQAKLALEIANKTLPYFR--NTENLNEVCKIIANSLGARATVITD 245 Query: 249 TDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEA--------HRTPEIHSM 300 T ++A + + N + S TR+ + G++++ D+ + +P I S Sbjct: 246 TKEIIAGFSTDK-SVINRSNIRSNNTREVLKTGEVMLVIKDDEDEIIEDFFYISPHIKSC 304 Query: 301 LVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAE 360 +++PL EK V+GTLKI++ A +IT + + +GLS +ISTQ+E+S+ E L + +E Sbjct: 305 IILPLKEKNDVSGTLKIFFDTAEKITEKNRYLMIGLSHLISTQMEISKVENLISLLKYSE 364 Query: 361 LRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKEL 420 L+ALQS+INPHFLFN LN ++S IR NP+ AR++ +LS YLRYN++ +++ KEL Sbjct: 365 LKALQSQINPHFLFNVLNTMTSLIRTNPEKAREVTIDLSNYLRYNLDNNLKS-VELIKEL 423 Query: 421 YQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVT 479 QI YI IE+ARFG+KL +IYD+DE + N IPSL+IQPLVEN+I HGI + KG V Sbjct: 424 NQIDTYIKIEKARFGEKLNIIYDVDESLYNFQIPSLIIQPLVENSIKHGILKKRDKGFVK 483 Query: 480 ISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRR 539 I V + + +A+ D G GI+ VI+ ++ IGL NVH R+KLLYGEGL+I + Sbjct: 484 IIVKKIDKDIEVAIEDDGVGIEQAVIDNLDKKIE--ENIGLKNVHQRLKLLYGEGLNITK 541 Query: 540 LEPGTEIAFYI 550 LE GT I F I Sbjct: 542 LEQGTRIKFKI 552 >UniRef50_Q3DHF4 Sensor histidine kinase n=10 Tax=Streptococcus agalactiae RepID=Q3DHF4_STRAG Length = 579 Score = 497 bits (1281), Expect = e-139, Method: Composition-based stats. Identities = 164/579 (28%), Positives = 296/579 (51%), Gaps = 35/579 (6%) Query: 7 MLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPV 66 + L + +RA L+++ + + I ++ L K K + +FSLFA+ S ++GV + Sbjct: 3 LFLIMMERAGLIILLAYAFVHIPFIKQTL-KQPELKKHQYILLILFSLFAIISNFTGVEI 61 Query: 67 EG----------------SLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVT 110 + S+ N R++ + G++ GP VGII G+++ RYL GG+ Sbjct: 62 QSDLSIIPQTLNHIADQSSVANTRVLTIGVSGLIGGPIVGIIVGLLSVFVRYLQ--GGLA 119 Query: 111 AIPCFITSILAGCISGWINLKIPK---AQRWRVGILGGMLCETLTMILVIVWAPTTALGI 167 I+S+L G SG + + R ++ G E L MI +++++ + Sbjct: 120 PHIYVISSLLIGLCSGLSGNYLRRNYNKIRVLDAMVVGFGMEILQMICILIFSVDFNQAL 179 Query: 168 DIVSKIGIPMIL-GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNS 225 +VS I +PMIL ++ +G + ++ S + +E + A Q L++AN TLP R + + Sbjct: 180 RLVSFISMPMILSNTLGLGIFISIISSTQKLEEHAKAFQTHQVLELANLTLPYLRKGLTT 239 Query: 226 ESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIII 285 ES + V EII + AV++T+ +LAYVG G ++ ++ ++A++ GK+ + Sbjct: 240 ESCQPVAEIIHKHMDVSAVSLTSQSAILAYVGDGADHHLPNTQILTKLAKRAIDTGKVSV 299 Query: 286 KNNDEA----HRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIIS 341 + H+ + S +VIPL V+ GTLK+Y+ A +T +++A GL I S Sbjct: 300 ATDKSEIECDHKNCPLSSAIVIPLHIHDVIVGTLKLYFSDAQHMTYVDRQLAEGLGNIFS 359 Query: 342 TQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRY 401 TQL + +AE+ + AE+++LQ+++NPHFLFNALN I IR++ + AR+L+ + S+ Sbjct: 360 TQLALGQAEEATRLLQDAEMKSLQAQVNPHFLFNALNTIYGLIRMDSEKARKLVQDFSKV 419 Query: 402 LRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD--IDEEVNCCIPSLLIQP 459 +R N++ I + EL Q+ Y+A+E+ARF + + D + + N IP +Q Sbjct: 420 IRANLQRAKQNLIPLHDELEQVNAYLALEEARFPNMVAFNLDNQTNSDDNLMIPPFTLQV 479 Query: 460 LVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN---EMPGN 516 L+EN+ H + + +++A +R+ I V+D G GI + + + G+ Sbjct: 480 LIENSYKHAFKHVNKNNQLKVTIARNNDRLHIIVQDNGIGIPKEKLITLGKKTQISKQGS 539 Query: 517 KIGLLNVHHRVKLLYG--EGLHIRRLEPGTEIAFYIPNQ 553 + N+ R+ ++Y L + GT IP + Sbjct: 540 GTAIENLVRRLNIIYDGQASLKFESNDSGTCAIVNIPIK 578 >UniRef50_Q8E7H4 Sensor protein lytS n=10 Tax=Streptococcus RepID=LYTS_STRA3 Length = 581 Score = 493 bits (1270), Expect = e-138, Method: Composition-based stats. Identities = 164/578 (28%), Positives = 299/578 (51%), Gaps = 40/578 (6%) Query: 7 MLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPV 66 +++ +F R +++I F L+ FR+L+ S +E + + IF LF + S +G+ + Sbjct: 2 LMVLLFQRLGIIMILAFLLVNNSYFRQLI--EERSKRETVVLVIIFGLFVIISNITGIEI 59 Query: 67 EG-----------------SLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGV 109 +G SL N R + + + ++ GP VG I G I G+HR+ G Sbjct: 60 KGDRSLVERPFLTTISHSDSLANTRTLVITTASLVGGPLVGSIVGFIGGVHRFFQ--GSF 117 Query: 110 TAIPCFITSILAGCISGWINLKIPKAQRWRVG---ILGGMLCETLTMILVIVWAPTTALG 166 + ++S+L G +SG I K+ + + IL ++ E++ M+ V ++ G Sbjct: 118 SGSFYIVSSVLVGIVSGKIGDKLKENHLYPSTSQVILISIIAESIQMLFVGIFT-----G 172 Query: 167 IDIVSKIGIPM-ILGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VN 224 ++V I IPM IL S+ + ++++ + A Q + L++ +TLP R + Sbjct: 173 WELVKMIVIPMMILNSLGSTLFLAILKTYLSNESQLRAVQTRDVLELTRQTLPYLRQGLT 232 Query: 225 SESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKII 284 +S R VCEII+ + DAV +T+ +VLA++GVG ++ G + ++ + G+ Sbjct: 233 PQSARSVCEIIKRHTNFDAVGLTDRSNVLAHIGVGHDHHIAGQPVKTDLSKSVIFDGEPR 292 Query: 285 IKNND----EAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQII 340 I + +++S +V+PL G LK+Y+ ++ + + +GL+QI Sbjct: 293 IAQDKAAISCPDHNCQLNSAIVVPLKINDKTVGALKMYFAGDKTMSEVEENLVLGLAQIF 352 Query: 341 STQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSR 400 S QL + E+ ++A+ AE++ALQ++INPHF FNA+N IS+ IR++ D AR + LS Sbjct: 353 SGQLAMGITEEQNKLASMAEIKALQAQINPHFFFNAINTISALIRIDSDKARYALMQLST 412 Query: 401 YLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPL 460 + R +++ D ++ +++E + Y+ +E+ RF DK + YDI +P +Q L Sbjct: 413 FFRTSLQGGQDREVTLEQEKSHVDAYMNVEKLRFPDKYQLSYDISAPEKMKLPPFGLQVL 472 Query: 461 VENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN---EMPGNK 517 VENA+ H + K + + + G+ ++V D G GI +I+++ E G Sbjct: 473 VENAVRHAFKERKTDNHILVQIKPDGHYYCVSVSDNGQGISDTIIDKLGQETVAESKGTG 532 Query: 518 IGLLNVHHRVKLLYG--EGLHIRRLEPGTEIAFYIPNQ 553 L+N+++R+ LLYG LH + GT++ + IPN+ Sbjct: 533 TALVNLNNRLNLLYGSVSCLHFSSDKNGTKVWYRIPNR 570 >UniRef50_B1IFE5 Sensor histidine kinase n=13 Tax=Clostridium RepID=B1IFE5_CLOBK Length = 544 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 167/556 (30%), Positives = 298/556 (53%), Gaps = 24/556 (4%) Query: 7 MLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPV 66 + + + + +L+ I + + + F + + + +L+ +T FS+ ++ T++GV + Sbjct: 2 IYIQLLESMSLIGIAAYLYSQTKTFNKFIKNKSDYKYKLIIIT-FFSVLSILGTYTGVNI 60 Query: 67 EG-SLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCIS 125 E +L N R I + G + GP VGI+ G+I G HRY +GG TA+ C I++IL G + Sbjct: 61 EPYALANARPIGAIVAGYIGGPLVGIMVGIIGGTHRYF--LGGFTALSCAISTILEGIVG 118 Query: 126 GWINLKIP-KAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL-GSVC 183 G N+ + G+ ++ E L MI++++ A +++ I +PMI+ S+ Sbjct: 119 GIANVITKDEGLDVSTGVTAAIIAEVLQMIIILLIAKPYEAALELERVIALPMIITNSIG 178 Query: 184 IGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDDIHAD 242 +G + ++ + + + A Q++ AL+IA KT R N E L KVC II + I+ Sbjct: 179 VGIFINIINNTQEHYKKIGAIQSQKALNIAKKTSIYLRSGFNQEILDKVCSIIYESINLK 238 Query: 243 AVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSMLV 302 ++ I + +Y G E + + +Y I ++N++ Sbjct: 239 SIFIAENGGIFSYNG--EELNKEKLKYRVKEYFDFKDYKLIKFEDNNKQKL------FYC 290 Query: 303 IPLW-EKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAEL 361 IP++ +K + I I + A LS +++TQ+E+ +QL + +KAEL Sbjct: 291 IPIYTDKNKFKFVIGIQVKSYKSIDKYFSDFAKELSALLATQIELYELDQLAQEVSKAEL 350 Query: 362 RALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELY 421 + L+++I+PHFLFN LN I+S R +P AR+LI NLS Y R ++ +D++ I +K E+ Sbjct: 351 KMLRNQIHPHFLFNTLNTIASFCRTDPIKARELILNLSNYFRQTLKRQDEKII-LKDEIE 409 Query: 422 QIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTI 480 ++ Y+AIE+ARFG++L + +I EE ++ +P ++QP++EN++ HGI G V I Sbjct: 410 FLESYLAIEKARFGERLNIDINIPEELLDAKVPVFVLQPIIENSMKHGILIKPQGGEVII 469 Query: 481 SVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI--- 537 + + ++++ ++DTG G+D + V + IGL NV+ R+KLLYGE I Sbjct: 470 TAIDEKDKIKFVIKDTGVGMDKNTLSYVVESWP---GIGLSNVNKRLKLLYGEKSFICIE 526 Query: 538 RRLEPGTEIAFYIPNQ 553 +L GT++ F IP + Sbjct: 527 SKLNEGTKVMFCIPKE 542 >UniRef50_C0ZBJ5 Two-component sensor histidine kinase n=2 Tax=Bacillales RepID=C0ZBJ5_BREBN Length = 583 Score = 490 bits (1262), Expect = e-137, Method: Composition-based stats. Identities = 169/583 (28%), Positives = 287/583 (49%), Gaps = 34/583 (5%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 + N+ L + +R ++L F L R LFR+LL + H +A + +F LF + T++G Sbjct: 1 MDNLTLLLIERMGILLTLAFILTRTSLFRQLLDRELHVGTS-IAFSVMFGLFGIAGTYAG 59 Query: 64 VPVEGS----------LVNVRIIAVMSGGILFGPWVGIITG------VIAGIHRYLIDIG 107 V V+G L + IIA + + + VIAG+H + +G Sbjct: 60 VVVQGESYHPAFWIFRLSHDEIIATSTLVGVVIGGLLGGPLVGLGAGVIAGLHVF--QLG 117 Query: 108 GVTAIPCFITSILAGCISGWINLKIPKAQ--RWRVGILGGMLCETLTMILVIVWAPTTAL 165 G A P ++ + G ++G++ + + + GM + M L+++ A L Sbjct: 118 GFAAAPMGLSIPITGLLAGYVARFFSQERVISPSKAMFIGMFAPIIQMSLLLIMAAPPEL 177 Query: 166 GIDIVSKIGIPMIL-GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLF-RHV 223 +V+ IGIPM+L SV I +++ E E SAA +A+ + IA + LP R + Sbjct: 178 ARTMVNVIGIPMVLTNSVSIAIFTTMIRVALQEAERSAAIEAERSFTIAERILPHLKRGL 237 Query: 224 NSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKI 283 ++ + +++ + A AVA+TN + +LA+VGVG ++ G+ S ++A+ G I Sbjct: 238 TPQTAQSAALVLQKETKAAAVAVTNRERLLAHVGVGADHHHPGEALHSELDKRALFSGGI 297 Query: 284 IIKNNDE----AHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQI 339 E + +H+ +++P+ E V G +K+YY QI + +A GL + Sbjct: 298 DKGLTRETVGCKRKNCSLHAAILVPIKEGDSVVGLIKLYYRRPQQIGKVQEALAKGLGNL 357 Query: 340 ISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLS 399 IS QL +S EQ++ + AELR LQ++I PHFLFN LN+I + IR++P AR + L Sbjct: 358 ISNQLTLSLTEQMKGLMKDAELRMLQAQIQPHFLFNTLNSIVTLIRIDPQLARHMTIQLG 417 Query: 400 RYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQ 458 ++R+N++L + +++EL + Y+ I + RF ++ V I+ V IP +Q Sbjct: 418 VFMRFNLKLTASPLVTVRQELDHLHAYLEIIKIRFSEQFAVRTIIEAGVEEALIPPGTLQ 477 Query: 459 PLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPK---VIERVEANEMPG 515 PL EN I HG++ G + + V V + D G G V+ +V G Sbjct: 478 PLFENCIQHGVRDITNGGEIILHVKRQDVHVAFQIEDNGQGFPDNLLPVLGKVPMESKEG 537 Query: 516 NKIGLLNVHHRVKLLYGEGLHIR---RLEPGTEIAFYIPNQRT 555 N IG+ NV+ R+ L G+ + + E G+ I F IP + Sbjct: 538 NGIGIHNVNQRLISLCGQEAQLHFANKQEGGSMITFTIPITKE 580 >UniRef50_B4UL02 Signal transduction histidine kinase, LytS n=9 Tax=Proteobacteria RepID=B4UL02_ANASK Length = 560 Score = 481 bits (1238), Expect = e-134, Method: Composition-based stats. Identities = 156/571 (27%), Positives = 279/571 (48%), Gaps = 31/571 (5%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 + +LL +F+ A+ + R FR P+ L++ F+ A+ T+ G Sbjct: 2 MGRLLLTLFEAMAVFFVLFHLYSRSPAFRPA-RTDWLRPRAKLSLLLFFTGIAILGTYLG 60 Query: 64 VPVEG-SLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAG 122 +P+ G ++ N R + + GG+L GP VG+ G+++G HR + +GG TA I + L G Sbjct: 61 LPLAGGAIANTRAVGAVLGGMLGGPAVGVAVGLLSGAHR--LTLGGFTAGAGAIATTLEG 118 Query: 123 CISGWINLKI-----PKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPM 177 + G ++ ++ + W++ E L M L++ + + +V IG+PM Sbjct: 119 LMGGLVHRRLASAAPDRLISWKLAFAVTAAGEALHMGLLLAVSRPFHESVRVVEGIGVPM 178 Query: 178 IL-GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTL-PLFRHVNSESLRKVCEII 235 IL SV + L++ + AA + AL IA +TL PL R + ++ II Sbjct: 179 ILANSVGAALFMTLLRDRHERYDRLAAATSAKALRIAERTLGPLARGFDRSVAGELASII 238 Query: 236 RDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAH--- 292 +++ AVAIT+T+ VLA+VG G +++ G SP TR A+ +++ + + H Sbjct: 239 QEETGVGAVAITDTETVLAFVGRGSDHHRPGLPIASPLTRGAIERHEVVFADGEHEHYRC 298 Query: 293 ---RTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRA 349 + S +VIPL G GT+++ + + + G++ ++S QL +R Sbjct: 299 AVSAACPLDSAVVIPLVVDGAAIGTVQLLETARTRFRRLNRSLGEGIADLLSDQLLRARF 358 Query: 350 EQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELK 409 + + + EL+ LQ++++PHFLFNALN + + R +P+ AR+L+ +LS R N++ + Sbjct: 359 HEQKSLLVLTELKLLQAQVDPHFLFNALNTVHAVTRTDPERARELLGHLSALFRKNLK-R 417 Query: 410 DDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHG 468 +++EL Y+ IE+ARFGD+L V+ ++D + +P+ +QPL+ENA+ HG Sbjct: 418 SAPLSTLEEELEHAGAYLEIEKARFGDRLAVLTEVDPALLRLRLPTFTLQPLIENAVKHG 477 Query: 469 IQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVK 528 + G+ I G I + D A + +G+ V R+K Sbjct: 478 LGATLGQATARIRAYRQGATAVIEIEDD---------AGAYAPRAGADGMGMSLVDRRIK 528 Query: 529 LLYGE--GLHIRRLEPG-TEIAFYIPNQRTP 556 L G G+ + T ++ +P + P Sbjct: 529 NLLGAEWGVTVSCTPSALTRVSVRVPFEERP 559 >UniRef50_Q8EQQ2 Sensor protein lytS n=1 Tax=Oceanobacillus iheyensis RepID=LYTS_OCEIH Length = 585 Score = 470 bits (1210), Expect = e-131, Method: Composition-based stats. Identities = 170/582 (29%), Positives = 316/582 (54%), Gaps = 35/582 (6%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 + + + +F R L+L+ F L RI FR LL K + K ++ + IF L ++ G Sbjct: 1 MIELTIVLFQRIGLLLLMAFILTRIPRFRSLLDKDI-TLKTVIYHSLIFGLISIIGAHVG 59 Query: 64 VPVEGS--LVNVRIIAVMSGGILFGPWVGII--------------TGVIAGIHRYLIDIG 107 V + G+ ++ II V +L G + ++ TG++AG+ Y+I +G Sbjct: 60 VVMIGNELIMQAWIINVAENEVLIGFSIVVVMIAGLLGGPFLGLGTGMVAGL--YIIFLG 117 Query: 108 GVTAIPCFITSILAGCISGWINLKI--PKAQRWRVGILGGMLCETLTMILVIVWAPTTAL 165 G + + + LAG ++GW + + G+ L M L+++ P + Sbjct: 118 GGGWVANSLINPLAGLLTGWAGQFFSDDRVMSPNKALFIGIFPPVLHMGLLLIMLPDQQI 177 Query: 166 GIDIVSKIGIPMIL-GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLF-RHV 223 G+ IV+ IGIP+++ S+ + ++++ E E AA + AL IA K LPL Sbjct: 178 GVQIVNTIGIPLVVTNSIALTIFTMMIRLALNETEQEAALETNRALTIAEKALPLLSEEP 237 Query: 224 NSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKI 283 + + RK+ +++ ++ A++ITN VL++VG+G+ ++Q G+ +++A+ G+I Sbjct: 238 GTMNARKMAKLLFKELDIAAISITNRTTVLSHVGLGDDHHQPGEPLKMRLSKKAVKDGRI 297 Query: 284 IIKNNDEAHRT----PEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQI 339 I + + ++ + +++P++ G V G + +YY H+ QIT+ +A GL I Sbjct: 298 QIAYHQSDIQCGVENCKLKTAIMVPIYRSGEVIGLINLYYRHSQQITAVEITLAKGLGTI 357 Query: 340 ISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLS 399 IS Q+ AE+++++ +A++R LQ++INPHFLFN + I S +R++ + AR ++ LS Sbjct: 358 ISNQISGLEAEKMKKLLKEAKMRNLQAQINPHFLFNTFHLIHSLLRVDAEKARHILVQLS 417 Query: 400 RYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQ 458 +++R N+++ + + + KEL ++ Y+ I QARF D+++ +D+ ++ IP +Q Sbjct: 418 QFMRANLKIASESLVPLHKELEHLQAYLEIVQARFPDQISTSIHVDDYLLDIEIPPATLQ 477 Query: 459 PLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVI-----ERVEANEM 513 PLVEN+I HG+ KG++TI++ + N V I + D G G + K++ + + NE Sbjct: 478 PLVENSIQHGLSLSTSKGILTINITKTDNNVSIVLLDNGQGFEEKLLPILGKKPLHQNEN 537 Query: 514 PGNKIGLLNVHHRVKLLYGEG--LHIRRLEPGTEIAFYIPNQ 553 GN I L N++ R+ L GE LHI+ + G+ + F +P + Sbjct: 538 KGNGIALYNINQRLISLLGEDSQLHIQNTDKGSMVQFILPYR 579 >UniRef50_P0AD15 Inner membrane protein yehU n=287 Tax=root RepID=YEHU_ECOL6 Length = 561 Score = 464 bits (1195), Expect = e-129, Method: Composition-based stats. Identities = 152/568 (26%), Positives = 282/568 (49%), Gaps = 32/568 (5%) Query: 5 FNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGV 64 FN++L + + + L+ + + + LF L+ + P + L +FS+F + TW G+ Sbjct: 4 FNLVLLLLQQMCVFLVIAWLMSKTPLFIPLMQVTVRLPHKFLCY-IVFSIFCIMGTWFGL 62 Query: 65 PVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCI 124 ++ S+ N R I + GG+L GP VG + G+ G+HRY +GG+TA+ C I++I+ G + Sbjct: 63 HIDDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRY--SMGGMTALSCMISTIVEGLL 120 Query: 125 SGWINL------KIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMI 178 G ++ + K + E + M++++ A + +VS I PM+ Sbjct: 121 GGLVHSILIRRGRTDKVFNPITAGAVTFVAEMVQMLIILAIARPYEDAVRLVSNIAAPMM 180 Query: 179 L-GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VNSESLRKVCEIIR 236 + +V + ++ E + + AL +A T + R N + KV +++ Sbjct: 181 VTNTVGAALFMRILLDKRAMFEKYTSAFSATALKVAASTEGILRQGFNEVNSMKVAQVLY 240 Query: 237 DDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEA----- 291 ++ AVAIT+ + +LA+ G+G+ ++ G S T +A+ G+++ + +E Sbjct: 241 QELDIGAVAITDREKLLAFTGIGDDHHLPGKPISSTYTLKAIETGEVVYADGNEVPYRCS 300 Query: 292 -HRTPEIHSMLVIPLW-EKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRA 349 H ++ S LVIPL E V GT+K+Y +S + + G++Q++S Q+ + Sbjct: 301 LHPQCKLGSTLVIPLRGENQRVMGTIKLYEAKNRLFSSINRTLGEGIAQLLSAQILAGQY 360 Query: 350 EQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELK 409 E+ + M ++E++ L +++NPHFLFNALN I + IR + + A QL+ LS + R N++ + Sbjct: 361 ERQKAMLTQSEIKLLHAQVNPHFLFNALNTIKAVIRRDSEQASQLVQYLSTFFRKNLK-R 419 Query: 410 DDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHG 468 E + + E+ + Y+ IE+ARF +L V I +E+ +P+ +QP+VENAI HG Sbjct: 420 PSEFVTLADEIEHVNAYLQIEKARFQSRLQVNIAIPQELSQQQLPAFTLQPIVENAIKHG 479 Query: 469 IQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVK 528 G V IS G + + + D + + +G+ V R++ Sbjct: 480 TSQLLDTGRVAISARREGQHLMLEIEDN---------AGLYQPVTNASGLGMNLVDKRLR 530 Query: 529 LLYGEGLHIR---RLEPGTEIAFYIPNQ 553 +G+ I + T I +P + Sbjct: 531 ERFGDDYGISVACEPDSYTRITLRLPWR 558 >UniRef50_B0G7P0 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0G7P0_9FIRM Length = 583 Score = 461 bits (1186), Expect = e-128, Method: Composition-based stats. Identities = 164/564 (29%), Positives = 281/564 (49%), Gaps = 22/564 (3%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 I +++ A+ AL+ I L RI+ ++L+ + K L ++ IF+ + ST G Sbjct: 16 IKDIVYALIVNIALLAIIANLLSRIQTVQKLILQEKRGLKGDLILSMIFAGLIILSTCIG 75 Query: 64 VPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGC 123 V + +N R+I MS G+L GP VG+ + I I+ + V A +IL G Sbjct: 76 VKITSYSLNTRVIGAMSAGLLGGPLVGLYSSAIGAIYVLIFSTPRVFARGSAFATILFGL 135 Query: 124 ISGWINLKIPKAQRWRVG--ILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPM-ILG 180 + + +W+ L E M ++ + + +D + +PM I+ Sbjct: 136 LGAGFYPYFQRG-KWKYTDLFLLACFAEICDMASLLRMTVSLEVAVDTIVDAALPMIIMN 194 Query: 181 SVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR--HVN-SESLRKVCEIIRD 237 ++ + + V ++ ++RQ + ++ K LPL + +N +E+++K+ +II Sbjct: 195 AIGMIVFISNFNGVFIFQDLESSRQIQKMSVLSQKCLPLLQDGGLNKAENMKKLSDIILK 254 Query: 238 DIHADAVAITNTDHVLAYVGVGEHNY------QNGDDFISPTTRQAMNYGKIIIKNNDEA 291 + + T+ + V+ + + + GD RQAM GK++ Sbjct: 255 ETQWSGILFTDREKVIQWQCKAKDEQAIFYQAKYGDPI-PEICRQAMEEGKLVKYEAQTG 313 Query: 292 H----RTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVS 347 T + +S+ +P K G+L ++ S E+ L + S+QL V Sbjct: 314 EKKWIHTAQDYSISSVPFRVKNQSVGSLTVWMKRQWMDRQSEIELLQHLMTLGSSQLAVL 373 Query: 348 RAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIE 407 EQ + + +AE +ALQ ++NPHFLFNALN IS R NP+ AR+L+ L+ Y RYN+ Sbjct: 374 ELEQQKNLLAQAEFKALQFQVNPHFLFNALNTISWVCRENPEEARELLLTLADYFRYNLN 433 Query: 408 LKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVH 467 D + +++EL +KDY+ IE+ARF +KL V YD+ E++ +P+L++QPLVENA+ + Sbjct: 434 Y-DAYMVPLREELEHVKDYLQIEKARFEEKLQVTYDVPEKMEILVPTLILQPLVENAVRY 492 Query: 468 GIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRV 527 GI G V I + E + R+ + D G G +V+E++ +E G+ IGL NVH R+ Sbjct: 493 GI-DRTGCRYVYIGITEEADAYRVEISDHGKGFPEEVLEKIAKDEPVGSSIGLQNVHKRM 551 Query: 528 KLLYGE--GLHIRRLEPGTEIAFY 549 K +YGE GL I+ G+ + Y Sbjct: 552 KSVYGEERGLQIQSTPKGSTVKLY 575 >UniRef50_C5CI42 Signal transduction histidine kinase, LytS n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CI42_KOSOT Length = 559 Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats. Identities = 157/558 (28%), Positives = 280/558 (50%), Gaps = 24/558 (4%) Query: 6 NMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVP 65 N+ + +R A++ + ++ + + L + P+ + + + + + T+ G+ Sbjct: 4 NIAFILIERVAIITMTIYIIFTFSFSQRHLIIRSK-PQSTIFIGILGGVLGIIGTFLGIE 62 Query: 66 VEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCIS 125 + ++ N R + V+ ++ GP G I+G+IAG+HR + +GGVT I C + +I+ G ++ Sbjct: 63 YKTAITNYRDMGVIIAAVIGGPISGTISGLIAGLHR--MTLGGVTGISCSLATIMVGVLT 120 Query: 126 GWINLKI-PKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL-GSVC 183 G+ PK R + + + E L + V + + DIV+ + +PM+L S+ Sbjct: 121 GFSRKLFGPKLLRPQFVVPLTIGMEFLHLGFVYLVTFPKDIAADIVTTVLLPMVLGNSIG 180 Query: 184 IGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLF-RHVNSESLRKVCEIIRDDIHAD 242 + + L+ ++++ EKE + I T+ L + +N + R++CE I+ D Sbjct: 181 VLLLSLIFRNLQIEKENVTEETTQSMFKIVENTIGLIDKGLNETTARQICETIKKLTSFD 240 Query: 243 AVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDE----AHRTPEIH 298 AVA+T + +L++VG GE ++ G+ ++ +TR + GK + + +H+ + Sbjct: 241 AVALTTREKILSHVGAGEDHHTPGNPNLTESTRLTIQKGKARLIKHRSGIGCSHKNCPLF 300 Query: 299 SMLVIPLW-EKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMAN 357 ++IP+ G GTLK+Y + I A GL QI+S +LE+S+ + Sbjct: 301 RGILIPIKFTNGETIGTLKLYKTKENDIEKYEITFAKGLGQILSLELELSKTSKEARDNA 360 Query: 358 KAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIK 417 +A R L +K +PHFLFN LNA++ R + + AR++I LS +RY + K + + Sbjct: 361 EARYRQLVAKTDPHFLFNILNALAYLTRHDSEKAREMILKLSEMMRYTLREK-RTFVPLD 419 Query: 418 KELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGV 477 EL +++Y+ + + RFG+ L + D + IP IQP+VEN+I HG+ P K K Sbjct: 420 DELSFVRNYLQLMKIRFGELLDFKMEKDLKEPFWIPPFTIQPIVENSIKHGMIPNK-KLF 478 Query: 478 VTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI 537 V ISV V I + DTG GI+ + + IGL + R+ LYGE H+ Sbjct: 479 VRISVKVKSRNVEILIFDTGKGIENENKLQ--------TGIGLKLIRERLSNLYGEKAHL 530 Query: 538 R---RLEPGTEIAFYIPN 552 + GT I IP Sbjct: 531 EVNSKPMKGTTITIRIPE 548 >UniRef50_B7IG85 Regulator of cell autolysis n=1 Tax=Thermosipho africanus TCF52B RepID=B7IG85_THEAB Length = 554 Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats. Identities = 153/556 (27%), Positives = 275/556 (49%), Gaps = 27/556 (4%) Query: 6 NMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVP 65 N+ L + +R +L+L+ + + + + K+ K L + I + T G+ Sbjct: 4 NISLILLERVSLILVITYITFQSYFIKNIFGKTL-VAKNRLVLGIIGGFLGILGTVFGIR 62 Query: 66 VEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCIS 125 G++VN R I V+ G+L G G+I +I+ I R +GG+T IPCF+ +I AG IS Sbjct: 63 YNGAIVNYRDIGVIFAGMLGGIPAGLIAALISSIFRLF--LGGITVIPCFLGTITAGIIS 120 Query: 126 GWI-NLKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL-GSVC 183 G+I +L K + +L +L E + + V+V +L DI KI PM++ S+ Sbjct: 121 GFISHLYGRKHFTFVRTLLYTVLIEIVHLTYVLVMVKPYSLAFDITFKILFPMVITNSLG 180 Query: 184 IGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDDIHAD 242 + F+ +++++E + E +A I K+L N + + + E I ++ + D Sbjct: 181 VSFLNYMIKNIEEQLEQTAENTINSIFVIMEKSLSSIEEGFNETNAKLIAETILNNTNFD 240 Query: 243 AVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRT----PEIH 298 AVAIT+ + +L +VG+G ++ G + + T++ + G + + ++ Sbjct: 241 AVAITDKNKILTHVGIGSDHHVTGMNIQTNATKKVIESGHGLKVVGKKGISCSAYNCPLY 300 Query: 299 SMLVIPLWE-KGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMAN 357 S ++IPL + + GTLK+YY +I +S L+Q +S + ++R + ++A Sbjct: 301 SGIIIPLTDLNNELIGTLKLYYSKKGEIKNSDIIFGKKLAQTLSLIISLARVNESLKLAT 360 Query: 358 KAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIK 417 + +LR L S ++PHFLFN LNAI + PD I N+S LRY + ++ + + +K Sbjct: 361 EEKLRELMSNLSPHFLFNTLNAIKYISKKEPDKVNYFIDNISELLRYTL-YENKKFVSLK 419 Query: 418 KELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGV 477 E+ +Y+ + + R+ DKL+ ++ E IP ++QPLVEN+I HG+ + + + Sbjct: 420 DEIKFTTNYLELMKLRYKDKLSYEITVNVENTIKIPPFILQPLVENSIKHGM--KEDELI 477 Query: 478 VTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI 537 + ++V N V+I+V D G G GL + R+K +YGE + Sbjct: 478 IKVNVESIDNYVKISVEDNGKGF----------KSSNKKGKGLELIQKRLKSIYGEDYNF 527 Query: 538 RRLE---PGTEIAFYI 550 GT + I Sbjct: 528 SIKNGIFGGTTVEIKI 543 >UniRef50_Q1QCQ6 Histidine kinase internal region n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1QCQ6_PSYCK Length = 582 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 168/585 (28%), Positives = 288/585 (49%), Gaps = 39/585 (6%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 ++ +L + R ++++ + + R+ +FR+++ + L + IF +F + ++ Sbjct: 1 MWEILSQMLSRMSIIITIAYLITRLPIFRKMISQRV-GIGGLFVLIIIFGMFGVIGNYTA 59 Query: 64 VPVE------------------GSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLID 105 + VE ++ + R I ++ GG GP VGI VIAG HR L+ Sbjct: 60 LVVEPGNQKVISNIWNPTLQSNNAVADTRNIGIIIGGFFGGPIVGIGASVIAGAHRLLM- 118 Query: 106 IGGVTAIPCFITSILAGCISGWINLKIPK--AQRWRVGILGGMLCETLTMILVIVWAPTT 163 GG + F SIL GC +GW K + R L ++ T+ ++ + V Sbjct: 119 -GGFISGATFWVSILGGCFAGWFGYKWRGMGLIKPRYMFLTSIIILTIQILAIPVLTTDH 177 Query: 164 ALGIDIVSKIGIPMIL-GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR- 221 + +++ G P+I+ SV I ++ +V E++ + A Q IA++T LFR Sbjct: 178 TTALKLIAFTGPPIIIINSVGIWICAMIFYNVVVEEDRTRASQTVKTFSIADQTFSLFRS 237 Query: 222 HVNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYG 281 +N S +K +II+ + VAIT LAY G + +N ++ ++ + A++ G Sbjct: 238 GLNENSAKKSTKIIKKLTAVEHVAITRGIRELAYTGTLNNQKRNEEEDLASR-KLALSTG 296 Query: 282 KIIIKNNDEA---HRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQ 338 K ++ + + +V+P + GT+ YY + IT +E+ GL + Sbjct: 297 KSVLNEPKSKWLFSKKSNSRASVVVPFCVQNKTIGTITFYYASSLHITVVEKELIEGLGK 356 Query: 339 IISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNL 398 + S QLE+ E+ ++ A++ ALQS+I PHFLFNALN I + R++P AR L+ +L Sbjct: 357 LFSNQLELGEIERHNQLLQNAKIEALQSQIQPHFLFNALNTIVALCRIDPMLARDLLLHL 416 Query: 399 SRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLI 457 S YLR N+ D + + KE+ ++ Y+AIEQARF DK V ++ ++ C IP +I Sbjct: 417 STYLRNNLSGIADFLVPVYKEMENVQAYLAIEQARFPDKFVVNIEVAPDLIECLIPPFII 476 Query: 458 QPLVENAIVH-GIQPCKGKGVVTISVAECGNRVR-IAVRDTGHGIDPKVI----ERVEAN 511 QPLVENAI H G + + KG V I + + + I V D G G++ I ERV + Sbjct: 477 QPLVENAIKHGGFKKIEAKGAVHIEIKKISELLILIKVSDNGIGVELNRIVDLGERVVKS 536 Query: 512 EMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQ 553 G+ L N+ R+ LY + + + GT ++ +P + Sbjct: 537 SKDGSGTALFNIKERLTALYSQDVRFNIDSDVGKGTCVSIILPVK 581 >UniRef50_A6LJ91 Signal transduction histidine kinase, LytS n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LJ91_THEM4 Length = 552 Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats. Identities = 148/556 (26%), Positives = 278/556 (50%), Gaps = 28/556 (5%) Query: 6 NMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVP 65 N+ L + +R +L+L+ + + + + + +S + K + + I + T G+ Sbjct: 4 NISLILLERVSLILVITYIIFQTYFIKNIFGRSLVT-KNKMVIGFIGGFLGILGTLFGIR 62 Query: 66 VEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCIS 125 G++VN R I V+ G+L G GI+ I+ R +GG+TA+PCF+ ++ AG IS Sbjct: 63 YNGAIVNYRDIGVILSGMLAGVSGGIVAAFISASFRLF--LGGITAVPCFLGTLTAGIIS 120 Query: 126 GWINLKI-PKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL-GSVC 183 G ++ K + + +L E + ++ V++ L DI KI PM++ ++ Sbjct: 121 GVLSEYYGRKHFTFFRTMYYTILIEIIHLMYVLLMVKPFYLAYDITFKILFPMVITNTLG 180 Query: 184 IGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDDIHAD 242 + F+ ++ ++E + + I + L N S + ++I ++ D Sbjct: 181 VSFLNFMMWNLEEKLQNVEENTISSIFVIMERILNTIEIGFNENSAILIAQVILENTDFD 240 Query: 243 AVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYG---KIIIKNN-DEAHRTPEIH 298 AVA+T+ +++LA+VG+G+ ++ +G+ + T++ +N G K++ K + + Sbjct: 241 AVALTDKEYILAHVGIGDDHHISGEKIKTQATKKVINSGYGLKVVGKKGINCEKENCPLF 300 Query: 299 SMLVIPLW-EKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMAN 357 S +VIPL G + GTLK+YY +H + + L+Q++S + +S + ++A Sbjct: 301 SAIVIPLNNINGDLIGTLKLYYSKSHSMQNKDIIFGKKLAQVLSLIISISEINESLKLAT 360 Query: 358 KAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIK 417 + ++R L S ++PHFLFN LNAI R P + I NLS LRY + ++ + + ++ Sbjct: 361 EEKMRELMSNMSPHFLFNTLNAIKYISRREPQRVDKFIDNLSSLLRYTL-YENSKLVSVR 419 Query: 418 KELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKG 476 E+ K+Y+ + + RF DKL + +E+ IP ++QPLVEN+I HG+ GK Sbjct: 420 NEVDFTKNYLELMKLRFEDKLNYEVKVAKELEEYLIPPFILQPLVENSIKHGM--KGGKL 477 Query: 477 VVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLH 536 ++ IS+++ +++I V D G G EM GLL + R+K+L+G+ Sbjct: 478 LIRISISKSDKKIKICVEDNGKGFS----------EMKKTGKGLLLIKKRLKVLFGDNYV 527 Query: 537 IRRLE---PGTEIAFY 549 G + Sbjct: 528 FNIKNNFFGGVVVEIK 543 >UniRef50_A6F874 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=A6F874_9GAMM Length = 515 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 143/517 (27%), Positives = 265/517 (51%), Gaps = 31/517 (5%) Query: 54 LFALFSTWSGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIP 113 +F + ++ G+ ++VN R I + GG+ GP VG+ G+ GIHRY + GG T + Sbjct: 1 MFCMMGSYFGLQYGDAIVNTRAIGAVMGGLFGGPVVGLAVGMTGGIHRYFM--GGFTDLA 58 Query: 114 CFITSILAGCISGWINLKIPKAQRWRVGI------LGGMLCETLTMILVIVWAPTTALGI 167 C I++ + G I G +++ + + + L + E M +++V A Sbjct: 59 CAISTSVEGLIGGLLHVYLLRKNKIHYIFKPHIIFLVTLFAELTQMAILLVVAKPYEQAY 118 Query: 168 DIVSKIGIPMI-LGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLF-RHVNS 225 +VS +PMI ++ + +++ + E + ++ AL IA++++ + + +N Sbjct: 119 ALVSVAALPMITANTIGAVLFMSIIEDRKSIFEKYSTAFSQRALRIADRSVGILSQGLNP 178 Query: 226 ESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIII 285 ES + + II ++ + A+AIT+T+++LA++G+GE ++ S +QA++ +II Sbjct: 179 ESAKTIANIIYEETNVGAIAITDTNNILAFIGIGEQHHHVNVPI-SSYIQQAIDENRIID 237 Query: 286 KN------NDEAHRTPEIHSMLVIPLWEKG-VVTGTLKIYYCHAHQITSSLQEMAVGLSQ 338 N + S ++PL V GT+K+Y +++ MA G++Q Sbjct: 238 LNSTTNTYQCSIDDKCRLGSAFILPLRNGDNKVVGTIKLYEPRRKLLSNINISMAEGIAQ 297 Query: 339 IISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNL 398 ++S+Q+ + +Q + + +AEL+ L +++NPHFLFNAL IS+ R PD AR LI +L Sbjct: 298 LLSSQILLGHYQQQQTLLTQAELKLLHAQVNPHFLFNALTTISAVTRREPDKARMLIQHL 357 Query: 399 SRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLI 457 +++ R N++ ++ E + +++EL + Y+ IEQAR ++L+V +I E+ + +PS + Sbjct: 358 AQFFRKNLK-QNIESVSLREELSHVNAYLTIEQARLTNRLSVSINIAPELMDIKLPSFTL 416 Query: 458 QPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNK 517 QPL+ENAI HGI G + I RI V D ++ Sbjct: 417 QPLIENAIKHGISTMLSAGKLEIYSQITPEGPRIFVTDN--------AGTFVTSKEENTG 468 Query: 518 IGLLNVHHRVKLLYGE--GLHIRRLEPG-TEIAFYIP 551 +GL V R+ + E L I + T+++F +P Sbjct: 469 LGLKIVDKRLINHFNEHSSLQISTTKNKLTQVSFLLP 505 >UniRef50_C9R972 Signal transduction histidine kinase, LytS n=1 Tax=Ammonifex degensii KC4 RepID=C9R972_AMMDK Length = 465 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 132/430 (30%), Positives = 227/430 (52%), Gaps = 20/430 (4%) Query: 146 MLCETLTMILVIVWAPTTALGIDIVSKIGIPMILGSVCIGFIVLLVQSVEGEKEASAARQ 205 +L E + + L ++ TAL + + ++L + E+ + A Sbjct: 29 LLAEVVGLELFLLVV-ATALWPQFWRATLFLALANGL---LFLILRRRGGEERISVRALD 84 Query: 206 AKL---ALDIANKTLPLFR-HVNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEH 261 ++ L IA++TLP R +N E+ K+ EII+ AVAIT+ + +LA++G G Sbjct: 85 SQALDPTLKIADETLPYLRRGLNPETAVKIAEIIQRIGDVPAVAITDRERILAFLGPGCD 144 Query: 262 NYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTP------EIHSMLVIPLWEKGVVTGTL 315 + G ++ T++ + G+I + P + + +++PL +G V GT+ Sbjct: 145 RHPPGGGIVTHATKRVIETGEIKVVERRADFECPVKDCVCPLGAAVIVPLKCRGEVVGTV 204 Query: 316 KIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFN 375 K+Y + +L +AVG++QI+ Q+E++ ++ ++ KA+L AL+++INPHFLFN Sbjct: 205 KLYRTEEGPLPRTLVNLAVGIAQILGIQMELAELDRQAQLVTKAQLDALRAQINPHFLFN 264 Query: 376 ALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFG 435 LN I R NPD AR+L+ L+ + R+ ++ +++E+ + Y+ +E+ARFG Sbjct: 265 TLNTIIMFSRTNPDRARRLLIRLASFFRHALKSTGH-FTTLREEMECVNTYLVLEKARFG 323 Query: 436 DKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVR 494 KL + ID+ + + +P L +QPLVENAI HGI P G G V ISV G +R+ V Sbjct: 324 QKLRFVRSIDKTLYDYLVPVLTLQPLVENAIKHGITPKLGPGTVRISVRRQGEEMRVEVA 383 Query: 495 DTGHGIDPKVIERVEA-NEMPGNKIGLLNVHHRVKLLYGEGLHIR---RLEPGTEIAFYI 550 D G GI P+++ ++ G+ +GL NVH R++ L+GEG + GT + F + Sbjct: 384 DDGVGIPPEIMPKILTPGSASGSGVGLYNVHERLRGLFGEGYGLEIKSEPGKGTTVRFRL 443 Query: 551 PNQRTPVASQ 560 P R + Sbjct: 444 PLLREVKEEE 453 >UniRef50_B0TBI2 Sensor protein lyts n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TBI2_HELMI Length = 583 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 161/570 (28%), Positives = 283/570 (49%), Gaps = 51/570 (8%) Query: 35 LHKSAHSPKELLAVTAIFSLFALFSTWSGVPV----------------------EGSLVN 72 L + K + F L A+ T + + + ++V Sbjct: 20 LIQRPLVGKRKAHLILWFGLLAVAGTQASAVITAGSALSSAPVLSNVPLAPVQADQAVVT 79 Query: 73 VRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISGWINLKI 132 + ++V+ GG++ G VG+ G IAG+H L+ +GG+ A IT +L G ++GW+ Sbjct: 80 LAGMSVIGGGLVGGLPVGLAVGAIAGMH--LLTLGGMAAEINAITMVLTGLLTGWL---- 133 Query: 133 PKAQRWRVGILGGMLCETLTMILVIV--WAPTTALGID------IVSKIGIPMILGSVCI 184 QR +L G + + ++ A T L D + + I+ ++ Sbjct: 134 --VQRSGESLLSGRWAFVVAFFVTLLAGGALVTHLHPDDGPVRFLEGTVLPSAIVNALAA 191 Query: 185 GFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VNSESLRKVCEIIRDDIHADA 243 + ++++V E E A + + AL ++ TL + +N+++ R + E+ ++ A Sbjct: 192 AVFMEMLRTVSREVEEV-ALETERALKLSEFTLSQLQQGLNADTGRAIAEVFMTELKTLA 250 Query: 244 VAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEI----HS 299 V IT+ VL +VG+GE Y G + + +A+ GK+ + E ++ + + Sbjct: 251 VTITDNKSVLVHVGIGEEEYPPGRLVHTKGSLKALETGKLQVVYRHEPYKHSYLDKILRA 310 Query: 300 MLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKA 359 +VIP G V G LK+Y+ + I +A GL ++IS QL + E+ + A Sbjct: 311 AIVIPFSCSGQVIGLLKLYFYRSQDIRPYEIGLAQGLGKLISYQLSLLETEKKSLLLKDA 370 Query: 360 ELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKE 419 ELR LQ++INPHFLFN+LNAI S IR NP AR+++ L+ ++R N+++ + + +++E Sbjct: 371 ELRMLQAQINPHFLFNSLNAIVSLIRTNPSLARKMMVQLADFMRMNLKMMEMPLVSLEEE 430 Query: 420 LYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVV 478 L ++ YI I Q RF D+LT+ +++ + N IP +QPLVEN+I HG++ G + Sbjct: 431 LRHLRAYIDIVQLRFADRLTIRLEVEPGLNNFRIPPSTLQPLVENSIQHGLKDISEGGSI 490 Query: 479 TISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMP---GNKIGLLNVHHRVKLLYGEGL 535 +S+A GN V++ V D G GI ++ R+ ++P GN IG+ NV R+ L G Sbjct: 491 VLSIARDGNGVQVRVTDNGSGIPESLLNRIARQQLPSQKGNGIGVHNVSQRLTSLLGGES 550 Query: 536 HI---RRLEPGTEIAFYIPNQRTPVASQAT 562 + E G E+ F++P + V + + Sbjct: 551 QLVFSNLAEGGCEVRFFLPEPKEEVVNDES 580 >UniRef50_C9LQU0 Sensor protein LytS n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQU0_9FIRM Length = 565 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 152/562 (27%), Positives = 264/562 (46%), Gaps = 33/562 (5%) Query: 15 AALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPVEGSLVNVR 74 ++ L+ L L R ++FR L + ++ +E + T IF++ L T+ G ++ R Sbjct: 21 ISIFLLVLLLLSRTKIFRNALSQERYTKREYIIFTVIFTILGLCGTFWNFRTPGGIMTFR 80 Query: 75 IIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISGWINLKIPK 134 + +M G + GP VG ITG+I GI+R I + TA SIL G +G ++ +I K Sbjct: 81 AVPIMLSGFIGGPIVGTITGLIVGINRIFI-LQTATAPINGGLSILQGIAAGLLSPQIKK 139 Query: 135 --AQRWRVGILGGMLCETLTMIL--VIVWAPTTALGIDIVSKIGIPMILGSVCIGFIVLL 190 +QRW + + E + + ++ W D++S + ++ + + + + Sbjct: 140 HSSQRWMWALFYSIGIEIVYWLFYALLTWPYAYINTKDLLSLVVPIIVTNTPAVALFIGV 199 Query: 191 VQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSES----LRKVCEIIRDDI-HADAVA 245 +++ ++++ AK A + AN L + ++ E+ K II + H A Sbjct: 200 LEATTRQQDSEKTETAKTAFNSANM---LIQTIHDEAHGFDFSKTPRIITTALPHLIWSA 256 Query: 246 ITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSMLVIPL 305 I D+V NY+N P + + I+ P + + + Sbjct: 257 IITNDNVFI-----STNYKN------PRNQSQGDAETSILLLQKTLPSMPHLLQLRIE-- 303 Query: 306 WEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQ 365 K + ++ + +E G ++II E ++ + + +AE+RALQ Sbjct: 304 -GKTKTICRIFASNPTDTPLSKTDKEFLNGTARIIELIHEHEELKKEKLLLQEAEIRALQ 362 Query: 366 SKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKD 425 ++INPHFL+N LN I+ +R +PD AR L+ LS Y R+ + + I + +E+Y I Sbjct: 363 AQINPHFLYNTLNTINFYVRSDPDIARNLLKYLSDYFRHTLN-NPSKMILLSEEIYDITC 421 Query: 426 YIAIEQARFGDKLTVIYDIDEE--VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVA 483 Y+ +E+ARF D+L + Y I E IP LL+QPLVENAI+HGI G + + + Sbjct: 422 YVELERARFSDRLQIEYRIPLEKMKKIQIPPLLLQPLVENAIIHGILKKPEGGKIIVGLH 481 Query: 484 ECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLH---IRRL 540 E + +I V DTG GI + ++ + + IGL+NVH R+ ++GE I R Sbjct: 482 EHPHLYKIFVADTGVGIPQDKLGKLLTSHKRRDNIGLINVHQRLLSIFGEKSRLHIISRT 541 Query: 541 EPGTEIAFYIPNQRTPVASQAT 562 GT + IP + + T Sbjct: 542 GKGTVVYIIIPKEGEHDNTDNT 563 >UniRef50_Q2RGH9 ATP-binding region, ATPase-like n=2 Tax=Clostridia RepID=Q2RGH9_MOOTA Length = 455 Score = 386 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 124/439 (28%), Positives = 218/439 (49%), Gaps = 16/439 (3%) Query: 137 RWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILGSVCIGFIVLLVQSVEG 196 R + + + ++ P + + V + L G L Q Sbjct: 3 RKVYLLFATLTISEVLTAVLFFRVPPFPVFLAFVVLNALGAGLAIYFQGLSCSLPQRPIE 62 Query: 197 EKEASAARQA-KLALDIANKTLPLFRH-VNSESLRKVCEIIRDDIHADAVAITNTDHVLA 254 E L IA++TLP+ R +N + K +II+D A+AIT+ + VL Sbjct: 63 EDANFNTDSIFVSTLQIADQTLPVLRGGLNKTTAAKTADIIQDLTQVPAIAITDRERVLT 122 Query: 255 YVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTP--------EIHSMLVIPLW 306 ++GVG +Q GD ++ T++ + G++ + + + P + S +++PL Sbjct: 123 FLGVGCDQHQAGDRILTEATKEVIATGRMKVVHTPQGLCCPRYGTGCNCPLKSAVIVPLK 182 Query: 307 EKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQS 366 + + G LK+Y + +AVGL+ ++S Q+E+S ++ R++ +A L AL + Sbjct: 183 CRDEIVGALKLYQTREGVFQPEIVRLAVGLANLLSLQIELSELDRQRQLLTEARLEALNA 242 Query: 367 KINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDY 426 +INPHF FN LN I S R +P+ AR+L+ L++ R + + +++EL ++ Y Sbjct: 243 QINPHFFFNTLNTIISFSRTDPERARRLLIRLAKLFRQTLS-RHGSLTTLQEELDCVRTY 301 Query: 427 IAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAEC 485 + +E+ARFG+K + D+ E + IP L +QPLVENA+ HG+ +G+G V +S Sbjct: 302 LVLEKARFGNKFRYLEDVPPELLEYHIPVLSLQPLVENAVNHGLLAKEGRGTVKVSGRLA 361 Query: 486 GNRVRIAVRDTGHGIDPKVIERV-EANEMPGNKIGLLNVHHRVKLLYGEGLHIR---RLE 541 G+ + +AV+D G GI + I V + GN +GL NV+ R + LYGE +R + Sbjct: 362 GHELHLAVKDDGVGIPAEKINLVTQPGYGSGNGVGLSNVNLRFQSLYGEDYGLRLMSEVG 421 Query: 542 PGTEIAFYIPNQRTPVASQ 560 GT + +P + + + Sbjct: 422 KGTTVILRVPLLKAAMVKE 440 >UniRef50_C8VX85 Signal transduction histidine kinase, LytS n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VX85_DESAS Length = 446 Score = 383 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 134/421 (31%), Positives = 223/421 (52%), Gaps = 13/421 (3%) Query: 146 MLCETLTMILVIVWAPTTALGIDI-VSKIGIPMILGSVCIGFIVLLVQSVEGEKEASAAR 204 +L + ++V + L + + + + + + S VL + + Sbjct: 11 LLNVIIRWLIVQLIGSVMVLALSLKLWQAVFILFIISGLSVSFVLYYWLNRRPVKLKSTD 70 Query: 205 QAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNY 263 Q + L IA++TLP R +N E+ EII+ DAVAIT+ + VLAY+G G ++ Sbjct: 71 Q-PIELQIASETLPFMRRGLNVETAGSTAEIIKKISDVDAVAITDREKVLAYIGEGSDHH 129 Query: 264 QNGDDFISPTTRQAMNYGKIIIKNNDEAHRT----PEIHSMLVIPLWEKGVVTGTLKIYY 319 + G + ++ TR+A+ G+I + +N + + +++PL G V GT+K+Y Sbjct: 130 KPGGEILTYATRRAIITGEIKVIHNSRDINCSVPHCPLEAAVIVPLRCNGEVVGTVKMYR 189 Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 ++ L ++AVG++Q++ Q+E++ ++ ++ AEL AL ++INPHFLFN LN Sbjct: 190 TKQGRMPDHLVKLAVGVAQMLDVQMELAELDRRAQLVAVAELDALHAQINPHFLFNTLNT 249 Query: 380 ISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLT 439 I R NP+TAR+L+ LS + R ++ K +K E+ I Y+ + +ARF +K+ Sbjct: 250 IIMFSRTNPETARRLLIRLSSFFRQALQRKGH-FNTLKGEIEYINTYLVLVRARFREKIR 308 Query: 440 VIYDID-EEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGH 498 V I E + +P L IQPLVENA+ HGI P +G G V+I+V + + I V D G Sbjct: 309 VRRQIAHELLEYRVPVLTIQPLVENAVKHGIMPKEGAGTVSITVKMQNDELLIVVEDDGV 368 Query: 499 GIDPKVIER-VEANEMPGNKIGLLNVHHRVKLLYGEGLH---IRRLEPGTEIAFYIPNQR 554 GI +I + ++ GN +GL NVH R+K L+GE I + GT + +P +R Sbjct: 369 GISLDMIPKVLQPGYGSGNGVGLSNVHERLKNLFGEEYGLRIISKPGEGTAVYVRVPIKR 428 Query: 555 T 555 Sbjct: 429 D 429 >UniRef50_B8G277 Signal transduction histidine kinase, LytS n=2 Tax=Desulfitobacterium hafniense RepID=B8G277_DESHD Length = 426 Score = 382 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 125/390 (32%), Positives = 220/390 (56%), Gaps = 16/390 (4%) Query: 177 MILGSVCIGFIVLLVQSVEGEKEASAA--RQAKLALDIANKTLPLFR-HVNSESLRKVCE 233 +IL + F +L ++E +K A A R A+L+ IAN+TLP R +N ++ + + Sbjct: 25 LILFLIGNTFFLLYHLNLEYKKTARQATERNAELSFKIANQTLPYLRRGLNEQNAEYIAK 84 Query: 234 IIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHR 293 II++ AV+IT+ + LAY+GVG + GD ++ TR + G I + Sbjct: 85 IIQEIGQVAAVSITDCEKQLAYLGVGCDQHHPGDKILTRATRDVIQSGVYKIVRTQKELN 144 Query: 294 TP-------EIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEV 346 P + + +++PL +G V GT+K+Y Q++S L +A+G++ ++ Q+E+ Sbjct: 145 CPRQNTCDCPLAAAVIVPLKCQGEVVGTMKLYETKVGQLSSDLIRLAIGMADLLGIQIEL 204 Query: 347 SRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNI 406 + + ++A +A+L ALQ++INPHF FN LN I ++ R +P+ +R+L+ +L+ + R + Sbjct: 205 AELDHQAKLAAEAQLNALQAQINPHFFFNVLNTIIATSRTSPNRSRRLLIHLAEFFRKAL 264 Query: 407 ELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAI 465 + I +++E+ +K Y+ +E+ARFG KL +I EE+ + +P L +QPLVENA+ Sbjct: 265 KSHG-SLITLREEMSFVKTYLILEKARFGRKLHFKSEIPEELMDALVPRLSVQPLVENAV 323 Query: 466 VHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIER-VEANEMPGNKIGLLNVH 524 HGI G GVV++ V + G + I V D G GI P+ ++ ++ GN +G+ NVH Sbjct: 324 KHGITEKIGNGVVSVKVEQKGQELYITVADDGVGIQPERLQEVLKPGVGSGNGVGMANVH 383 Query: 525 HRVKLLYGEGLHI---RRLEPGTEIAFYIP 551 R+ YG+ + + T + ++P Sbjct: 384 ERLIGHYGKEYGLQIKSQPNISTTVTMHLP 413 >UniRef50_Q67QS2 Two-component sensor histidine kinase n=1 Tax=Symbiobacterium thermophilum RepID=Q67QS2_SYMTH Length = 477 Score = 379 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 133/441 (30%), Positives = 221/441 (50%), Gaps = 31/441 (7%) Query: 133 PKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILGSVCIGFIVLLVQ 192 P R +L M+ ++ +VWA M +V + +VL Sbjct: 42 PVVNRRARALLLAMVGVGGAALVWLVWARPPRAE----------MWAAAVVVLQLVLAAW 91 Query: 193 SVEGEKEASAARQA--------KLALDIANKTLPLF-RHVNSESLRKVCEIIRDDIHADA 243 + + + + A +L I +T+P + +N ES +K+CEIIR DA Sbjct: 92 LLTRQDDEESISPAVLESITSFDTSLRIGEETMPYLKQGLNFESAQKICEIIRQITEMDA 151 Query: 244 VAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNN------DEAHRTPEI 297 VAIT+ +L + GVG ++ G ++ TR + G+ + N+ DE + Sbjct: 152 VAITDDKVILGFSGVGCRRHRQGGPILTGATRHVLETGEARVVNDPRVLSCDEPGCPHPL 211 Query: 298 HSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMAN 357 + ++ PL +G V GT K+Y + + + +A G++ ++ Q+E++ +E+ R++ Sbjct: 212 KAAVITPLKFRGKVVGTFKLYRASNAPVPTYVVRLAAGIAALLGIQMELAESERQRQLVV 271 Query: 358 KAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIK 417 +A L ALQ++I PHFLFN LN I R +P+ +R+L+ +L+++ R ++ + + + Sbjct: 272 RARLEALQAQIRPHFLFNVLNTIIMFSRTDPERSRELLVSLAQFFRRSLTTRGN-MNTFQ 330 Query: 418 KELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKG 476 EL I Y+++EQARFG+KL V +D V +P L +QPLVENA+VHG+ P + G Sbjct: 331 DELEYIHIYLSLEQARFGEKLRVKMKVDPRVTGAMVPVLTLQPLVENAVVHGLAPKEDTG 390 Query: 477 VVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGN-KIGLLNVHHRVKLLYGEGL 535 VV I + G+ + I + D G G+D + RV N +GL NV+ R+ LYG Sbjct: 391 VVGIRARQVGSHLHILIADNGVGMDRETQRRVFEEGYGNNMGLGLTNVNERLISLYGPQY 450 Query: 536 HIR---RLEPGTEIAFYIPNQ 553 +R GT I IP Q Sbjct: 451 RLRIRSTPGRGTAIRLRIPLQ 471 >UniRef50_Q3AEC2 Sensor histidine kinase n=2 Tax=Clostridia RepID=Q3AEC2_CARHZ Length = 427 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 131/357 (36%), Positives = 215/357 (60%), Gaps = 13/357 (3%) Query: 210 LDIANKTLPLF-RHVNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDD 268 L +AN+ LP+ + +N E+ K+ EII+ +AVAIT+ + VLAYVGVG ++ GD Sbjct: 61 LMLANEALPIIKQGLNVETAGKIAEIIQRISDMEAVAITDREKVLAYVGVGCERHKIGDP 120 Query: 269 FISPTTRQAMNYGKIIIKNNDEAHRT------PEIHSMLVIPLWEKGVVTGTLKIYYCHA 322 + T++A+ G++ I ++ + + + +V+PL +G V GT+K+Y Sbjct: 121 IRTFATKEAIRTGELKIIDHSLKYICSVKDCDCPLQAAVVVPLKIRGQVVGTIKLYQTKK 180 Query: 323 HQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISS 382 ++ + ++A+G++QI++ Q+E++ ++ +M KA+L ALQ+KINPHFLFN LN I Sbjct: 181 GEMPAQTVKLAMGIAQILNLQMEIAELDRQAQMVTKAQLEALQAKINPHFLFNTLNTIIM 240 Query: 383 SIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIY 442 R NP+ AR+L+ +L+++ R ++ + +K+EL + Y+ +E+ARF KL +I Sbjct: 241 FNRTNPELARKLLIHLAKFFRQTLKKQGM-FGTLKEELDYVNTYLVLEKARFRQKLRIIR 299 Query: 443 DID-EEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGID 501 DID E +N P L +QPLVENA+ HGI P + +G V I + G ++ + ++D G GI Sbjct: 300 DIDRELLNYQFPVLTLQPLVENAVKHGITPKESQGTVLIRIKRDGEKINVEIKDDGVGIS 359 Query: 502 PKVIER-VEANEMPGNKIGLLNVHHRVKLLYGE--GLHIRR-LEPGTEIAFYIPNQR 554 P ++ R +E GN +G+ NVH R+ LYG GL I L GT ++F IP + Sbjct: 360 PSMVGRVLEPGFGSGNGVGMSNVHERLLSLYGREAGLKIESKLGVGTTVSFSIPALK 416 >UniRef50_C8WPP3 Signal transduction histidine kinase, LytS n=2 Tax=Coriobacteriaceae RepID=C8WPP3_EGGLE Length = 438 Score = 353 bits (906), Expect = 1e-95, Method: Composition-based stats. Identities = 130/418 (31%), Positives = 212/418 (50%), Gaps = 22/418 (5%) Query: 150 TLTMILVIVWAPTTALGIDIVSKIGIP------MILGSVCIGFIVLLVQSVEGEKEASAA 203 TL M + V A + G+ ++ I +P M+ V +++V + + ++ A Sbjct: 17 TLEMFMFTVTALS---GLVLLWSIAVPYRNVAIMVCAGVVFTLSIVVVIRLIMDPDSVRA 73 Query: 204 RQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHN 262 RQ+ L +A++TL ++ ++ +K+C ++ A AVAIT+ +L Y G E Sbjct: 74 RQSDSMLKLASQTLTCMNDGMDYKAAQKICGLLLPSTAAIAVAITDKKQILGYAGFEEAQ 133 Query: 263 YQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTP----EIHSMLVIPLWEKGVVTGTLKIY 318 G + T + GK+ I E P I + +++PL V GTLK Y Sbjct: 134 NLPGSIIRTHATHATLADGKLRILFTPEDIGFPSESSNIKAAIIVPLAIGRNVEGTLKFY 193 Query: 319 YCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALN 378 Y A I+ + + +A G +++STQ+ S E+ ++A + EL+ LQS+INPHFLFN +N Sbjct: 194 YRRAKHISETQKSIAEGFGKLLSTQMAASALEEQTQLATRMELKMLQSQINPHFLFNTIN 253 Query: 379 AISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFG-DK 437 I+S IR +P+TAR+L+ + + R +E D I +E+ Q K Y E ARFG D+ Sbjct: 254 TIASLIRTDPETARKLLREFAVFYRRTLEDSAD-LIVFAREMEQTKRYFTFEVARFGADR 312 Query: 438 LTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 + + ID V + +P L+QPLVENA+ H + P +GK + ++ GN V + V D Sbjct: 313 VEMEMRIDPRVEDMLVPPFLLQPLVENAVRHAM-PSEGKLTIEVTGEVTGNDVIVRVCDN 371 Query: 497 GHGIDPKVIERVEANEMP-GNKIGLLNVHHRVKLLYGEGLHIR---RLEPGTEIAFYI 550 G G+ + + E G I + NVH R+ +G G H+ L GT + + Sbjct: 372 GVGMTEEARCNILHPESSLGLGIAVKNVHDRICGYFGPGTHMEVESELGKGTCVILVL 429 >UniRef50_D0WHA5 Regulatory protein LytS n=2 Tax=Coriobacteriaceae RepID=D0WHA5_9ACTN Length = 429 Score = 348 bits (894), Expect = 3e-94, Method: Composition-based stats. Identities = 123/412 (29%), Positives = 214/412 (51%), Gaps = 19/412 (4%) Query: 156 VIVWAPTTALGIDIVSKIGIPMILGS------VCIGFIVLLVQSVEGEKEASAARQAKLA 209 V++ A G +V I P +GS +L++ + + A+Q+ Sbjct: 13 VVLLATLLLSGGTLVYSIYSPAQVGSFTPIAGTSFTLCLLILVYMRSNPDTIRAQQSDTI 72 Query: 210 LDIANKTLPLFR-HVNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDD 268 L IA++TL + V ES +++C ++ A AVAIT+ +H+L Y G E + G Sbjct: 73 LRIASQTLECLQNGVTIESAQRICRLLLPATSARAVAITDREHILGYSGDQEISNPGGSP 132 Query: 269 FISPTTRQAMNYGKIIIKNNDEAHRTP----EIHSMLVIPLWEKGVVTGTLKIYYCHAHQ 324 + T + GK + + EA P + + +++PL + GTLK+Y+ A Sbjct: 133 IRTKATHATLKDGKTRVLSTPEAIGFPSSVKNLRAGIIVPLRRGEAIVGTLKLYFRRARN 192 Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 I + +A GL +++STQ+ +Q ++A ELRALQS+INPHFLFN +N I+S Sbjct: 193 INETQLALAEGLGELLSTQIAAVELDQQVKLATAMELRALQSQINPHFLFNTINTIASLT 252 Query: 385 RLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARF-GDKLTVIYD 443 R +PD AR L+ + + R +E + I++ +E+ Q + Y A E ARF GD+L + + Sbjct: 253 RTDPDRARVLLREFAVFYRRTLE-DAQDMIELDREMDQTQRYFAFELARFGGDRLNLQVE 311 Query: 444 IDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 ++ + + +P+ LIQPLVENA+ H + P +G + + G+ I+V D G G++P Sbjct: 312 VEPGLEDFLVPAFLIQPLVENAVKHAM-PDQGMLHIVVRAESDGDDAIISVSDDGVGMEP 370 Query: 503 KVIERVEAN-EMPGNKIGLLNVHHRVKLLYGEGLHIR---RLEPGTEIAFYI 550 + ++E + E G I + N+ R+++ +G ++ R+ GT + + Sbjct: 371 EQSRKLEQSPESRGTGIAMKNITERLRVFFGTESYMEVSSRIGEGTVVRLVL 422 >UniRef50_C8W8F7 Signal transduction histidine kinase, LytS n=3 Tax=Atopobium RepID=C8W8F7_ATOPD Length = 433 Score = 347 bits (892), Expect = 6e-94, Method: Composition-based stats. Identities = 113/412 (27%), Positives = 207/412 (50%), Gaps = 28/412 (6%) Query: 165 LGIDIVSKIGIPMILGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-V 223 L +V+ ++ + +++L + + E + +++ + L++A+KTL R + Sbjct: 14 LSWSVVTDNLFAALVAGGGLATVIVLGGTTQPGNEHTRSQETERTLEVASKTLKTLRGGL 73 Query: 224 NSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKI 283 + E+ +C ++ + A A++IT+T++VL + G + G + P T + + G++ Sbjct: 74 SQETAPTICTLLLSETSAAAISITDTEYVLGFEGDIATAHVPGSKVVGPAT-EVLESGRM 132 Query: 284 ----------IIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMA 333 + +++PL + GT+K+YY +I + +A Sbjct: 133 ETFVSVDSRQQVLKRRGGFGNGGSSFGIIVPLIVQDRPVGTIKLYYRRGIEIDRTQLAIA 192 Query: 334 VGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQ 393 GL +++STQL ++ E+ +AE++ALQ++INPHFLFN LN I+S R NP+ AR Sbjct: 193 EGLGELLSTQLSSYELDRQAELTARAEVKALQAQINPHFLFNTLNTIASLTRTNPNKARD 252 Query: 394 LIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFG-DKLTVIYDIDEEV-NCC 451 L+ S + R +E I + +EL Q + Y+ IE+ARFG +++ +DE + Sbjct: 253 LLREFSVFYRRTLESSQGSLIPLSQELTQTRRYLTIEKARFGEERIQESEHVDEGCEDIQ 312 Query: 452 IPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN 511 +PS LIQP+VENA+ H ++ +G + I VA + + I+V D G G+D + + R+ Sbjct: 313 VPSFLIQPIVENAVRHAMKD-EGALHIDIHVARDEDDILISVADDGLGMDEETVSRLLNG 371 Query: 512 EMP----------GNKIGLLNVHHRVKLLY--GEGLHI-RRLEPGTEIAFYI 550 + P G I + NV R + Y G G+ I + GT + + Sbjct: 372 QGPTPHNSSGRSEGTGIAIKNVAERAERFYAAGSGMEIMSKPGQGTCVTLKL 423 >UniRef50_A4E9X1 Putative uncharacterized protein n=2 Tax=Collinsella RepID=A4E9X1_9ACTN Length = 484 Score = 336 bits (862), Expect = 1e-90, Method: Composition-based stats. Identities = 130/455 (28%), Positives = 206/455 (45%), Gaps = 38/455 (8%) Query: 132 IPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILGSVCIGFIVLLV 191 AQ IL G++ L ++L+ +V +I G V + F V Sbjct: 41 FRTAQHVVQAILLGIVVPLLILLLIWDLTDNPNPVPAVV------VIAGLVMLCFFFSYV 94 Query: 192 QSVEGEKEASAARQAKLALDIANKTLPLF-RHVNSESLRKVCEIIRDDIHADAVAITNTD 250 V + +SA L IA+K R + E+ +II + A A+ T+ Sbjct: 95 FLVPDDLTSSA---TDRTLAIASKIFAYTSRGLTPEAALGASKIILSETTASAICFTDGK 151 Query: 251 HVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRT----PEIHSMLVIPLW 306 VLA G G + TT +N G+ + + D + T P + + +V PL Sbjct: 152 QVLASWGEDSAKCPAGTPVVLRTTLNVINSGEQSVFSRDASTETGGYFPRLRAGIVAPLT 211 Query: 307 EKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQS 366 +G GTL++YY I +A G + +ISTQL E+ E+ + ELRALQS Sbjct: 212 VRGHCVGTLELYYPRLSSIDMRQTALASGFADLISTQLASFELERQDELTARVELRALQS 271 Query: 367 KINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDY 426 +++PHFLFN ++ I S +R PD AR L+ + S Y R + D ++ E+ Q Y Sbjct: 272 QVDPHFLFNTISTIVSLVRTEPDKARSLLIDFSNYYRQTLS-DSDTLTTLEHEVEQGTRY 330 Query: 427 IAIEQARFGD-KLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAE 484 I + QAR+GD +L V DID EV +C +P ++QPL+EN I H Q + + E Sbjct: 331 INLMQARYGDGRLRVSVDIDFEVRDCMVPPFILQPLLENCIKHA-QRETEPLSIHVRAFE 389 Query: 485 CGNRVRIAVRDTGHGIDPKVIERV--------------EANEMPGNKIGLLNVHHRVKLL 530 + + I V D G G+ +V + + + G + L NV R+ Sbjct: 390 TDDGLEIIVEDDGIGMSEEVCAHLFEQHRLEEPESITADGSVKRGCGLALFNVLQRIHFF 449 Query: 531 YGE--GLHIRRLEP-GTEIAFYI---PNQRTPVAS 559 YGE G+ ++ E GT++ + P++ P+ + Sbjct: 450 YGEDSGMRVKSQEGVGTQVIVELNGEPHEPAPLTA 484 >UniRef50_B6GAE7 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6GAE7_9ACTN Length = 466 Score = 330 bits (846), Expect = 1e-88, Method: Composition-based stats. Identities = 124/427 (29%), Positives = 211/427 (49%), Gaps = 29/427 (6%) Query: 146 MLCETLTMILVIVWAPTTALGIDIVSKIGIPMILGSVCIGFIVLLVQSVEGEKEASAARQ 205 +L + +V + G++ ++ I ++L + + + S + ++ Sbjct: 37 LLAALVVFTMVGFFGYAILTGVETLTTIAA-LVLLVLFTCGFIYVFFS----PDTLRSQY 91 Query: 206 AKLALDIANKTLP-LFRHVNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQ 264 + L +A+ L + + ES ++C + + A +A+T+ D VLA VG ++ Sbjct: 92 TEQTLAVASGMLEDITGGLTRESAEEICRRLLPETRAMTIAVTDRDVVLACVGELADDFP 151 Query: 265 NGDDFISPTTRQAMNYG-----KIIIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYY 319 G +PTTR + +G ++ E I + ++ PL +G GTLK YY Sbjct: 152 AGSPIHTPTTRYVIEHGIAQSFTSVMDVRGEKGSQRNIPAGIIAPLKIRGKAVGTLKFYY 211 Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 A + + +A G ++++STQL V E+ E+ +AE+RALQ++INPHFLFN LN Sbjct: 212 RSARHVNRTQYALASGFAELLSTQLTVYELERQAELTARAEVRALQAQINPHFLFNTLNT 271 Query: 380 ISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFG-DKL 438 I+S R +P AR+L+ S++ R +E + I +K+E+ Q Y+ E+ARFG D++ Sbjct: 272 IASFTRTDPLRARELLREFSQFYRATLENSG-QLIPVKREIAQTLRYLTFEKARFGEDRV 330 Query: 439 TVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGN-RVRIAVRDT 496 V D+DE+ IP+ +IQPLVENA+ H + P +G ++I+V G V I V D Sbjct: 331 LVSVDVDEDAEEVLIPAFVIQPLVENAVRHAM-PDEGALKISITVERAGEAAVSIRVADD 389 Query: 497 GHGIDPKVIERV----------EANEMPGNKIGLLNVHHRVKLLYGEGLHIRR---LEPG 543 G G+D + R+ A + G + + N+ R+K YG G Sbjct: 390 GMGMDEQTAMRLFDRSIAAPDPNAPQGGGAGVAMHNISERIKRFYGPKSRTSVESAPGKG 449 Query: 544 TEIAFYI 550 T IA ++ Sbjct: 450 TTIALHL 456 >UniRef50_Q5YL06 Putative sensor protein n=1 Tax=Aeromonas hydrophila RepID=Q5YL06_AERHY Length = 440 Score = 328 bits (842), Expect = 3e-88, Method: Composition-based stats. Identities = 169/300 (56%), Positives = 224/300 (74%), Gaps = 1/300 (0%) Query: 7 MLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPV 66 MLLAVF+RAALML+ LFFL R R F+ L K H+P EL+ V AIF LFA+FST++G+PV Sbjct: 2 MLLAVFERAALMLMTLFFLTRTRPFQRLFQKRDHTPAELVLVAAIFCLFAVFSTYTGIPV 61 Query: 67 EGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISG 126 EG+L+NVRIIA++SGGILFGPWVGI GVI+G+HRYLID+ G T+IPC I SI+AG ++ Sbjct: 62 EGALINVRIIAIISGGILFGPWVGIPAGVISGLHRYLIDMDGHTSIPCLIASIIAGLLAT 121 Query: 127 WINLKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILGSVCIGF 186 W++L+ K++ W GIL GM CE LTM+L+ A+G++IVS I PMI G++CIG Sbjct: 122 WLHLRCRKSRLWLYGILAGMACEGLTMLLIWQLTEPHAVGVEIVSHIAYPMIAGALCIGL 181 Query: 187 IVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIHADAVAI 246 I+ LVQ ++ EKE AA+QAKLALDIANKTLP F++++ SL +VC IIR +I ADAVAI Sbjct: 182 IIKLVQDLDDEKELIAAKQAKLALDIANKTLPFFQNIDRHSLSQVCGIIRSEISADAVAI 241 Query: 247 TNTDHVLAYVGVGEHNY-QNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSMLVIPL 305 T+T VLAYVGVG+ Y + IS T++A+ +III N+ + + HS+++IPL Sbjct: 242 TDTRDVLAYVGVGKDYYELDEHHAISAMTQRAVLLDQIIINNDLRQYHLSDFHSVIIIPL 301 >UniRef50_C6WDP3 Signal transduction histidine kinase, LytS n=2 Tax=Pseudonocardineae RepID=C6WDP3_ACTMD Length = 428 Score = 326 bits (837), Expect = 1e-87, Method: Composition-based stats. Identities = 116/403 (28%), Positives = 199/403 (49%), Gaps = 13/403 (3%) Query: 169 IVSKIGIPMILGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSES 227 + + + +I +G V+L ++ A L +K R + +E+ Sbjct: 17 LTERAVLGVIATLAVLGLFVMLCRARRVSTSVEDAV--MDMLHRMSKASADLREGLTAEA 74 Query: 228 LRKVCEIIRDDIHADAVAITN-TDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIK 286 K +R+ + AV IT+ T VL++ G +Y+ I R+ K Sbjct: 75 ADKATPHLREMLRCVAVGITDSTGSVLSWDGGAADHYELMRGHIEQAIREVHKEHVEHRK 134 Query: 287 NNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEV 346 + + +HS +++PL + V GTL + ++ MA ++ +STQLE+ Sbjct: 135 LDCDLSGPCPMHSAVIVPLIVESEVAGTLIVVSGVPNK---RQIRMAEETARFVSTQLEL 191 Query: 347 SRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNI 406 ++ R+ +AE+RAL+++I+PHF++NALN ISS IR +P AR+L+ + + RY+ Sbjct: 192 EVLQKSRQALAQAEVRALRAQISPHFVYNALNTISSLIRTDPVYARELLQEFAEFTRYSF 251 Query: 407 ELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAI 465 + EL I Y+ IEQAR+G +L V I E + +P L +QPLVENA+ Sbjct: 252 RTDG-FFTTLSDELTNIHRYLTIEQARYGARLEVRLRIAPEVLQVVLPFLCLQPLVENAV 310 Query: 466 VHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVI-ERVEANEMPGNKIGLLNVH 524 HG+ G G++TI+ + G I+V D G G+DP+ + E ++ G +GL N++ Sbjct: 311 RHGLAKKPGGGMLTITAEDNGAEALISVEDDGVGMDPERLFEDLKDAHQTGAHVGLGNIN 370 Query: 525 HRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRTPVASQATLL 564 HR++ ++G+ + E G +I +P R V TL+ Sbjct: 371 HRMRAVFGDDYALVVETAPEAGMKIILKVPKYRQGVRPNLTLV 413 >UniRef50_UPI0001B586EC signal transduction histidine kinase, LytS n=2 Tax=Actinomycetales RepID=UPI0001B586EC Length = 434 Score = 325 bits (834), Expect = 3e-87, Method: Composition-based stats. Identities = 100/362 (27%), Positives = 186/362 (51%), Gaps = 17/362 (4%) Query: 208 LALDIANKTLPLFR-HVNSESLRKVCEIIRDDIHADAVAITNTD-HVLAYVGVGEHNYQN 265 A+ +K P R ++ E+ ++ + + + AV IT+++ +L++ G +Y + Sbjct: 45 QAVHRMSKATPNLRAGLDEEAANRMTAELLEVLDCLAVGITDSEGTLLSWAGEATDHYLD 104 Query: 266 GDDFISPTTRQAMNYGKIIIKNNDEAHR---TPEIHSMLVIPLWEKGVVTGTLKIYYCHA 322 D I R+ + + + +N T ++ + ++P+ +G TL + Sbjct: 105 VVDDIGTALRK---HRRAVADHNKMPCNHRGTCKMKTAAIVPILVEGEAEATLIVVGRTR 161 Query: 323 HQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISS 382 ++ +MA + Q + TQ E++R E+ R +AE++AL+++I+PHF++NALN IS+ Sbjct: 162 GKLV----QMAEAVGQFVCTQFELARLEESRNQLQQAEIKALRAQISPHFVYNALNTISA 217 Query: 383 SIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIY 442 IR +P+ AR+L+ + + + RY+ + +EL I Y+ IE ARFG +L V Sbjct: 218 LIRTDPEEARELLQDFADFTRYSFRTSGM-YTTLAEELRNIDRYLTIENARFGGRLEVRM 276 Query: 443 DIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGID 501 I E ++ +P L+IQPLVENA+ HG+ G VT+ + G+ I V D G G+D Sbjct: 277 KIAPEVLSVVVPFLIIQPLVENAVKHGLASKPSGGCVTVIARDDGHEALITVEDDGIGMD 336 Query: 502 PKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRR---LEPGTEIAFYIPNQRTPVA 558 P+ + + G +GL N++ R++ ++GE + G ++A +P + V Sbjct: 337 PRQLTDLRNAHRTGAHVGLGNINQRMRQVFGEDYALTVETAPGAGMKVALRVPKFKLGVR 396 Query: 559 SQ 560 Sbjct: 397 PN 398 >UniRef50_D2B6F5 Signal transduction histidine kinase, LytS n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B6F5_STRRD Length = 394 Score = 322 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 115/389 (29%), Positives = 188/389 (48%), Gaps = 21/389 (5%) Query: 177 MILGSVCIGFIVLLVQSVEGEKEASAARQAKLA-LDIANKTLPLFR-HVNSESLRKVCEI 234 + S +GF++ + A +A A L I P R + +S RK Sbjct: 10 LCALSTFLGFVLSRRRPASPRHPAGLPDEATFATLHITALAAPSLRAGLTRDSARKAIRH 69 Query: 235 IRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHR- 293 +R + A+A+T+ D VLA+ G + D R + G+ + D Sbjct: 70 LRTLLGVSAIAVTDADGVLAWDGAAGCH----RDHAPEHARTVFSSGRPYVVAGDAIACD 125 Query: 294 --TPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQ 351 I V+PL G V G L Y ++++ L +++ +S QLE++ + Sbjct: 126 TPGCAIRGAAVVPLTVDGRVIGALAAYDT---EVSAGLVRTVTEVARWVSGQLELAELDS 182 Query: 352 LREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDD 411 R A +AE RAL+++I+PHF++N+L I+S +R +P+ AR+L+ + + + R+ + D Sbjct: 183 SRRRAMEAETRALRAQISPHFVYNSLTTIASFVRTDPERARELLMDFADFTRHALRRGGD 242 Query: 412 EQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQ 470 + EL + Y+ +E+ARFG++L + E + +P L +QPLVENAI HGI Sbjct: 243 -FTTLADELRCVDRYLLLERARFGERLRFTVRVAPEVLPVPVPFLCLQPLVENAIKHGIA 301 Query: 471 PCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANE---MPGN-KIGLLNVHHR 526 G G V + V + G I+V D G G+DP R+ ++ PG IGL NV R Sbjct: 302 ATGGSGEVRVVVRDAGPEAHISVEDDGLGMDPGRARRLLDDDPCQGPGEGGIGLANVDVR 361 Query: 527 VKLLYGEGLHI---RRLEPGTEIAFYIPN 552 ++ +YGEG + L GT+I +P Sbjct: 362 LRQIYGEGYGLVVETALGAGTKIRLRVPK 390 >UniRef50_C4FAQ4 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAQ4_9ACTN Length = 495 Score = 320 bits (821), Expect = 8e-86, Method: Composition-based stats. Identities = 112/471 (23%), Positives = 196/471 (41%), Gaps = 62/471 (13%) Query: 130 LKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILGSVCIGFIVL 189 AQ W + L + L ++ + + + I G V + F Sbjct: 21 KFFRVAQSWALRGLILCVPMLLGLLALEFVTNPNPVP-------AVITIAGLVLLCFFFA 73 Query: 190 LVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VNSESLRKVCEIIRDDIHADAVAITN 248 V + SA L IA+K RH + E+ C++I + A A+ IT+ Sbjct: 74 YVFVAPDDFSLSA---TDRTLGIASKIFAYTRHGLAPEATLGACKLILPETLASAICITD 130 Query: 249 TDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNN-----DEAHRTPEIHSMLVI 303 V+A G G + +T + + ++ + DE + P + + + Sbjct: 131 GTAVVASWGEDSDRCPTGTPVVLESTLRVIENERMEVFARETTGPDEPYFFPRLQAGITA 190 Query: 304 PLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRA 363 PL + GT ++YY I + +A G +++ISTQL E+ +++ + ELRA Sbjct: 191 PLIVRDRCMGTFELYYPRYSDIDARQTALATGFAELISTQLASFELERQEDLSARMELRA 250 Query: 364 LQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQI 423 LQS+++PHFLFN + I S +R P+ AR L+ + S Y R + D ++ EL Q Sbjct: 251 LQSQVDPHFLFNTIGTIVSLVRTEPEKARSLLIDFSNYYRQTLS-NSDALTSLENELDQG 309 Query: 424 KDYIAIEQARFGD-KLTVIYDIDE-EVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTIS 481 YI + QAR+GD +L + D D ++C +P ++QPL+EN I H ++ + +S Sbjct: 310 MRYINLMQARYGDGRLKLSVDFDPFTLDCRVPPFILQPLLENCIKHAMREV-EPLSIKLS 368 Query: 482 VAECGNRVRIAVRDTGHGIDPKVIERV--------------------------------- 508 E + ++I V D G G+ + + + Sbjct: 369 SLETDDGIQIVVEDDGIGMSEETLAHLLDVKRDVDNTCPCGCTEEDGECVEAKLESMSRR 428 Query: 509 ------EANEMPGNKIGLLNVHHRVKLLYG--EGLHIRRLEP-GTEIAFYI 550 + + G + L+NV R+ +G G+H+ E GT + + Sbjct: 429 SAPTTADGSLRRGGGLALVNVLMRIHFFFGAESGIHVESQEGVGTRVTVDL 479 >UniRef50_A4E9W6 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W6_9ACTN Length = 447 Score = 320 bits (821), Expect = 8e-86, Method: Composition-based stats. Identities = 112/443 (25%), Positives = 209/443 (47%), Gaps = 35/443 (7%) Query: 133 PKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIP-MILGSVCIGFIVLLV 191 +AQR + ++ + +++ + +V+ I ++ + + + Sbjct: 4 RRAQRDSSISIFRIIAVACAICVLVYFI------FALVTGIEPIATVIACALLCIFLCIF 57 Query: 192 QSVEGEKEASAARQAKLALDIANKTLPLFRH-VNSESLRKVCEIIRDDIHADAVAITNTD 250 + ++ ++ + L +A+ L + + ES R VC I + A VAIT+ D Sbjct: 58 IFLTLNPDSVRSQYTEETLSVASAMLEDIKGGLTQESARLVCRRILPETRAMTVAITDED 117 Query: 251 HVLAYVGVGEHNYQNGDDFISPTTRQAMNYG-------KIIIKNNDEAHRTPEIHSMLVI 303 +VLA G E + TR + +G + + +D +H ++ + ++ Sbjct: 118 NVLACAGEFEEKLLPDTPIHTLATRYVIEHGIVQSFNRMVDVVGSDGSHN--QVPAGIIA 175 Query: 304 PLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRA 363 P+ GTLK YY + + +A G ++I+STQL + E +E+ +AE+RA Sbjct: 176 PIKVGDRTVGTLKFYYKTPRAVDRTQYALASGFAEILSTQLAIHELEVQKELTARAEVRA 235 Query: 364 LQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQI 423 LQ++INPHFLFN LN I+S R +P AR+L+ S + R ++ I + +E+ Q Sbjct: 236 LQAQINPHFLFNTLNTIASFTRTDPLRARELLREFSSFYRATLDNSG-SLIPVSREVAQT 294 Query: 424 KDYIAIEQARFG-DKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTIS 481 K Y+ E+ARFG D++ +D+ E+V + +P+ +IQP+VENA+ HG+ + ++ Sbjct: 295 KRYLTFEKARFGEDRVLATFDVSEDVEDTLVPAFVIQPIVENAVRHGMGD-DDALRIDVT 353 Query: 482 VAECGNR-VRIAVRDTGHGIDPKVIERV----------EANEMPGNKIGLLNVHHRVKLL 530 V + G + IAV D G G+D R+ + + G + + N+ R+ Sbjct: 354 VHQDGEDAILIAVADNGVGMDEGTAARLFDERSARPDASSPQGGGAGVAMHNISERIHRF 413 Query: 531 YGEGL--HIRR-LEPGTEIAFYI 550 YG + GT++ ++ Sbjct: 414 YGPHSYTRVESAPGKGTKVLLHL 436 >UniRef50_A0JUQ0 Signal transduction histidine kinase, LytS n=8 Tax=Actinomycetales RepID=A0JUQ0_ARTS2 Length = 405 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 105/365 (28%), Positives = 181/365 (49%), Gaps = 16/365 (4%) Query: 202 AARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGE 260 A R L A++ R +N K +R + DA+AIT+T VLA+ G E Sbjct: 40 AERATYKTLHAASRAGQHLRTGLNPAGAAKASRQLRTILGCDALAITDTSGVLAWDGAAE 99 Query: 261 HNYQN----GDDFISPTTRQAMNYGKIIIKNNDEAHRTPEI---HSMLVIPLWEKGVVTG 313 + + + G++ + D A ++++ P+ V G Sbjct: 100 ELKPSLMGLAAKVLDGGHTAVIPAGEMQMLAGDAASGAITTDIERAVVIAPIKAGARVVG 159 Query: 314 TLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFL 373 + + A + L ++ ++ Q+E++ + R + +AE+RAL+++I+PHF+ Sbjct: 160 VIAAFAPSAG---AGLVRATGEVADWVAAQVELAELDASRTLLMEAEVRALRAQISPHFI 216 Query: 374 FNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQAR 433 +N+LNAI+S I +P AR+L+ + + RY+ D + +EL I Y+ +E+AR Sbjct: 217 YNSLNAIASFINTDPVRARELVVEFADFTRYSFRRHGD-FTTLAEELRCIDRYLLLERAR 275 Query: 434 FGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIA 492 FGD++ V I E ++ IP L +QPLVENA+ HG++ +G G +TIS + G + Sbjct: 276 FGDRVQVSLRIAPEVLSTVIPFLSLQPLVENAVRHGLEAKEGPGHITISANDSGAFAEVT 335 Query: 493 VRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGE--GLHIRR-LEPGTEIAFY 549 + D G G+DP+ + + A + +GL NV R++ +YGE GL I GT I Sbjct: 336 IEDDGVGMDPEQLRSMLAGHSDSDHVGLRNVDARLRQVYGEDNGLVIETAPGEGTLITMR 395 Query: 550 IPNQR 554 +P + Sbjct: 396 VPKSQ 400 >UniRef50_A4F5Z4 Sensor kinase, two-component system n=24 Tax=Actinomycetales RepID=A4F5Z4_SACEN Length = 422 Score = 295 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 104/395 (26%), Positives = 185/395 (46%), Gaps = 21/395 (5%) Query: 169 IVSKIGIPMILGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSES 227 + + + + + V+L +S A A AL P R + ES Sbjct: 13 LTERTVLTTLAALAVLAMFVMLCRSRRVSTSVEDATLA--ALHQVTSAAPHLRAGLTQES 70 Query: 228 LRKVCEIIRDDIHADAVAITNTD-HVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIK 286 + +R + AV + + + +L++ G H+Y + Q + GK Sbjct: 71 ADQTAPHLRALLGCIAVGVVDAEGTLLSWDGEANHHY---GGLRTRI-EQVLRTGKREYV 126 Query: 287 NNDE---AHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQ 343 ++ E R + +V+PL +G G L I L A ++ +STQ Sbjct: 127 DHGEVACEQRPCVMRHAVVVPLEVEGENRGALVIISAGDR---RRLLRAAGEVANHVSTQ 183 Query: 344 LEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLR 403 LE++ ++ +E +AE+RAL+++I+PHF++NALN ISS IR +P+ AR L+ + + R Sbjct: 184 LELAELQESKERLARAEVRALRAQISPHFIYNALNTISSQIRNDPEQARDLLQEFADFTR 243 Query: 404 YNIELKDDEQIDIKKELYQIKDYIAIEQARFG-DKLTVIYDIDEE-VNCCIPSLLIQPLV 461 Y+ + E+ I Y+ +E+ARFG D+L V I E + +P L +QPLV Sbjct: 244 YSFRTSGL-YTTLADEIRNIDRYLTLERARFGPDRLKVQLKIAPEVLPVVVPFLALQPLV 302 Query: 462 ENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIE-RVEANEMPGNKIGL 520 ENA+ HG+ G G V++ + G I+V D G G++P+ ++ + + G +GL Sbjct: 303 ENAVRHGLANKPGGGTVSVIAEDNGVEALISVDDDGIGMNPERLDAELADAHLTGAHVGL 362 Query: 521 LNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPN 552 N+++R++ +G + G ++ +P Sbjct: 363 GNINNRMRATFGNDYGLVVETEEGAGMKVIMRVPK 397 >UniRef50_C9NAB2 Signal transduction histidine kinase, LytS n=6 Tax=Streptomyces RepID=C9NAB2_9ACTO Length = 408 Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 182/371 (49%), Gaps = 27/371 (7%) Query: 208 LALDIANKTLPLFR-HVNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNG 266 L A+ P R + ES R+ +R + DA+ +T+ D VL + G G+H+ Sbjct: 45 ETLHTASLAAPPLRSGLTEESARRSARRLRSLLGTDALCLTDRDRVLVWDGEGDHH---- 100 Query: 267 DDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQIT 326 + + G+ ++D + + +PL V GTL Y + Sbjct: 101 GKDVMEQVEGLLASGRDTAFHSDCGDLDCTLRWAVAVPLTVDHRVLGTLVAYAPRE---S 157 Query: 327 SSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRL 386 + L A +++ + QLE++ ++ R +AE++AL+++I+PHF+FN+L AI+S +R Sbjct: 158 AVLARAAGEVARWVCVQLELAELDRSRTQIVEAEIKALRAQISPHFIFNSLAAIASFVRT 217 Query: 387 NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDE 446 +P+ AR+L+ + + RY+ + E + EL+ I Y+A+ +ARFG +L+V + Sbjct: 218 DPERARELLLEFADFTRYSFR-RHGEFTTLADELHSIDQYLALVRARFGARLSVTLQVAP 276 Query: 447 E-VNCCIPSLLIQPLVENAIVHGIQ-----PCKGK--------GVVTISVAECGNRVRIA 492 E + +P L +QPLVENA+ HG++ P VTIS + G + Sbjct: 277 EVLPVSLPFLCLQPLVENAVKHGLEGAVTLPRPHGPVRAVDAPIRVTISALDAGAEAEVV 336 Query: 493 VRDTGHGIDPKVIERVEANEMPGN-KIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAF 548 + D G G+DP+ + R+ E + IGLLNV R++ +YG+ + + G +I Sbjct: 337 IEDDGTGMDPERLRRILRGEGGASAGIGLLNVDERLRQVYGDDYGLVIETGVGAGMKITL 396 Query: 549 YIPNQRTPVAS 559 +P R V Sbjct: 397 RLPKYRAGVHG 407 >UniRef50_A8F4Q3 Signal transduction histidine kinase, LytS n=1 Tax=Thermotoga lettingae TMO RepID=A8F4Q3_THELT Length = 511 Score = 278 bits (711), Expect = 4e-73, Method: Composition-based stats. Identities = 117/555 (21%), Positives = 237/555 (42%), Gaps = 61/555 (10%) Query: 7 MLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPV 66 + + + R AL+ + +F +I+ R L K ++ K + + + +F + + G+P Sbjct: 3 LAITLLSRVALLGLIVFVVIQSYSARISLAKIFNTKKPYI-LGLLGGIFGVAGNFLGLPY 61 Query: 67 EGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISG 126 +G+++N R + ++ + G +I +IA IHRYL +GG +A C + +I AG S Sbjct: 62 KGAIINFRDMGIIVTALYGGFPAALIGSMIASIHRYL--LGGPSAFACALGTIGAGLFSS 119 Query: 127 WIN-LKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILGS-VCI 184 + G + + E + + + + L DIV IPM + + + + Sbjct: 120 VFRKRFFHSKNKILAGSVVAIFAELIHLSIAYFFIYPPELAADIVFNALIPMTVSNFLGV 179 Query: 185 GFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIHADAV 244 G + LV+ E + +++ + L + + L + N E+L + + ++ D + Sbjct: 180 GLTLTLVKQSEQYVKNFSSQIFSITLRVFESAVRLLENPNMENLNLFSKDLAKILNVDKL 239 Query: 245 AITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSMLVIP 304 I E ++ E + IP Sbjct: 240 TI-----------KLEDEFKP------------------------EKKGECRL----FIP 260 Query: 305 LWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRAL 364 L +G + G + + M +S+ + + + A + +A +A +R Sbjct: 261 LISRGKIIGRIIVENRDGFDEDQIF--MIKQISKFVEIVVIGATAVREAILAREAMMRDF 318 Query: 365 QSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIK 424 SK+ PHF+FN L +I N + A ++I NLS LRY + + + +E+ I+ Sbjct: 319 MSKLGPHFIFNTLASIRYLTVNNANDAVKMIDNLSELLRYYFK-NQKTFVSLNEEIKIIE 377 Query: 425 DYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVA 483 Y++I +AR+GD L+ ++ + N +P +++QP++ENA+ HG GK V I Sbjct: 378 CYLSIMKARYGDILSYHINVTGDFRNHPVPPMILQPVIENAVEHG--EKNGKIYVKIEAE 435 Query: 484 ECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRRL-EP 542 + G+ + + V D+G G+ +G+ + R++ +Y + ++ + + Sbjct: 436 KYGDYMILKVSDSGKGLSRGF----------KKGVGMKLLETRLENIYSKKASVKYVNDN 485 Query: 543 GTEIAFYIPNQRTPV 557 G + IP + V Sbjct: 486 GLTVLIKIPLECESV 500 >UniRef50_C0BEZ4 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=C0BEZ4_9FIRM Length = 574 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 68/242 (28%), Positives = 122/242 (50%), Gaps = 13/242 (5%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 +++S + M V + +++ + Q K EL+ALQ++INPHFL+N L+AI+ Sbjct: 339 LSNSFEHMVVKIQKLM------EQVRQEEITLRKTELKALQAQINPHFLYNTLDAIAWMC 392 Query: 385 RLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 + A +++ L+R R +I K E I I+KE+ K Y+ IE R+ +K T ++ Sbjct: 393 EDGKNEDAEEMVTALARLFRISIS-KGHELIPIEKEVEHAKSYLKIENYRYKNKFTYSFE 451 Query: 444 IDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 + E ++ + +QP++ENAI HG++ +G + I + E G + V D G G+ Sbjct: 452 VAESCLSYLCNKITLQPIIENAIYHGVKQMIDEGEIWIRIFEDGEDIIFQVEDNGIGMTE 511 Query: 503 KVIERVEANE-MPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRTPVA 558 + + E IG+ NV+ R+K+ +G + L+ GT + +P R Sbjct: 512 EQCREILRKEPGDRTGIGIKNVNDRIKIYFGSNYGLNITSELDEGTCVTIRMPKVREEEY 571 Query: 559 SQ 560 + Sbjct: 572 EK 573 >UniRef50_Q65NG8 Putative uncharacterized protein n=2 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65NG8_BACLD Length = 594 Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 72/257 (28%), Positives = 124/257 (48%), Gaps = 20/257 (7%) Query: 308 KGVVTGTLKIYYCHAHQ-----ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELR 362 K +G Y + + S + + +++S E+ +AELR Sbjct: 335 KTAESGNFSTLYQEEREDEIGLLGKSFNRLMFRIRELMSV------TERQERQKREAELR 388 Query: 363 ALQSKINPHFLFNALNAISSSIRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELY 421 ALQ++INPHFL+N L+ I+ R + L+ LS+ R ++ K + I + E Sbjct: 389 ALQAQINPHFLYNTLDTINWMARKKGAEEVSDLVQALSKLFRISLS-KGKDIIPLSDEFE 447 Query: 422 QIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTI 480 +++Y+ I++AR+ DKL ++ + I L++QP+VENAI HGI+ KG G + I Sbjct: 448 HVENYLKIQKARYRDKLNYSIEMTGLCDDRLILKLVLQPIVENAIYHGIKEKKGPGHIAI 507 Query: 481 SVAECGNRVRIAVRDTGHGIDPKVIERVE---ANEMPGNKIGLLNVHHRVKLLYGEGLHI 537 E + I + D G G+D + ++++ + G++NVH R+ L +GE I Sbjct: 508 KGMEEDGSLIIKIEDDGAGMDEETLKQITDQFKHRDDTAGYGMINVHERIALTFGEPYGI 567 Query: 538 ---RRLEPGTEIAFYIP 551 R GT + +P Sbjct: 568 TVESRKGAGTAVTIRLP 584 >UniRef50_A6BKJ8 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=A6BKJ8_9FIRM Length = 579 Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats. Identities = 75/261 (28%), Positives = 125/261 (47%), Gaps = 23/261 (8%) Query: 304 PLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRA 363 + K G LK +++ MA L Q ++ + + E + Sbjct: 328 DIKAKEEGIGELK-------NLSAHFNIMADKL------QEQMEEIRRNERERQQMEKKL 374 Query: 364 LQSKINPHFLFNALNAISSSIRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQ 422 LQS+INPHFL+N L++I IR + A +++ L+++ R ++ + + I ++KEL Sbjct: 375 LQSQINPHFLYNTLDSIIWMIRSEEYEGAGKMVSLLAKFFRISLS-QGKDMIPLEKELEH 433 Query: 423 IKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTIS 481 Y+AI+ RF DK + D + P L IQPL+ENAI HG++ G +TI Sbjct: 434 ASSYLAIQNIRFKDKFEFQIEADPALLKYLCPKLSIQPLLENAIYHGMEGMYEDGEITIR 493 Query: 482 VAECGNRVRIAVRDTGHGIDPKVIERVEANE----MPGNKIGLLNVHHRVKLLYGEGLHI 537 + + + I V D G G+ + I+ + N+ G+ IG+ NV+ R++L+YGE + Sbjct: 494 IYDRDGDIGIDVADNGPGMTQETIDHIMHNKVISSKRGSGIGVRNVNERIQLIYGEDYGV 553 Query: 538 ---RRLEPGTEIAFYIPNQRT 555 L+ GT IP Sbjct: 554 TITSELDEGTTATITIPKMEE 574 >UniRef50_C5EHM0 Histidine kinase internal region n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHM0_9FIRM Length = 605 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 76/240 (31%), Positives = 127/240 (52%), Gaps = 17/240 (7%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSS 383 ++T S M ++ +I Q + AE++ALQ++INPHFL+N L++++ Sbjct: 366 ELTDSFNYMVDKINTLIRQVY------QEKIAQKNAEVQALQAQINPHFLYNTLDSVNWM 419 Query: 384 -IRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIY 442 I +I +L +RY IE ++ + + +E+ + Y+ I++ R DKL Sbjct: 420 LIDREEYDISDIIISLGSLMRYCIE-DENAFVPLDREVEYVISYLKIQKNRLEDKLEYQV 478 Query: 443 DIDEEVNC-CIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGID 501 +D+ + +P L++QP+VENAI HGI+P K KG V+I + + G+ + + V D G G+ Sbjct: 479 QVDDRLRQEKVPKLILQPMVENAITHGIEPRKQKGKVSILIRDAGDEILVTVEDDGIGMT 538 Query: 502 PKVIERVEAN----EMPGN-KIGLLNVHHRVKLLYGEGLHIRRL---EPGTEIAFYIPNQ 553 P+ + ++ E G+ IGL NV R++L YGE IR GT I IP + Sbjct: 539 PEQLNHLKEELPDLEKEGHTGIGLRNVDRRIRLHYGEQYRIRIESVYGKGTSIHLRIPKE 598 >UniRef50_C6J483 Multi-sensor signal transduction histidine kinase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J483_9BACL Length = 596 Score = 261 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 72/237 (30%), Positives = 117/237 (49%), Gaps = 15/237 (6%) Query: 323 HQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISS 382 Q++ M + +++ + Q +E K+EL LQS+INPHFL+N LN+++ Sbjct: 353 EQLSKRFNLMLRRIRELMDQII------QEQEAKRKSELDVLQSQINPHFLYNTLNSVTR 406 Query: 383 SIRLN-PDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVI 441 L + I +LSR+ R ++ K I ++ EL ++ Y+ I+ RF +K Sbjct: 407 LAELGRNEEVVTTITSLSRFFRISLS-KGKHIISVQDELEHVRHYLIIQTIRFKNKFRYE 465 Query: 442 YDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGI 500 DE + C L++QPLVENAI HGI+ +G + I G + +RD G G+ Sbjct: 466 IRADEAALKCSTLKLILQPLVENAIHHGIEKSAEQGFIDIEARLEGENLIFRIRDNGIGM 525 Query: 501 DPKVIERVEAN---EMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIP 551 P +E++ + G+ +G+ NV R+ L YG G + E GT + IP Sbjct: 526 SPDTVEKLFSGNIRSESGSGVGVRNVQERITLYYGPGYGLHFESEPEEGTTVTITIP 582 >UniRef50_C0BXS4 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=C0BXS4_9CLOT Length = 605 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 68/257 (26%), Positives = 129/257 (50%), Gaps = 22/257 (8%) Query: 305 LWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRAL 364 L K + GT +I + +LQ MA + +++ + + +E K+E+ AL Sbjct: 348 LNAKVKIGGTYEI-----RHLGKTLQSMADNMKKLMDDIV------KEQEDKRKSEMSAL 396 Query: 365 QSKINPHFLFNALNAISSSIRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQI 423 QS+INPHFL+N L++I I + A ++ L+R R ++ K I +++EL Sbjct: 397 QSQINPHFLYNTLDSIIWMIENERYEGAIDMVTALARLFRISLS-KGKNIITVEQELQHA 455 Query: 424 KDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISV 482 ++Y+ I++ R+ +K +++ C L+IQPL+EN+I HG++ G G + I Sbjct: 456 ENYLIIQKVRYKNKFDYDISMEKNCAQCATIKLIIQPLIENSIYHGMEYMDGDGRIYIRA 515 Query: 483 AECGNRVRIAVRDTGHGIDPKVIERVE-----ANEMPGNKIGLLNVHHRVKLLYGEGLHI 537 + + I + D G G+ +E ++ +++ G+ IG NV R++L +G+ + Sbjct: 516 YRKEDTLYIEIEDNGPGMTEAQVEELQNGTLRSSKGKGSGIGFQNVRERIRLYFGQQYGL 575 Query: 538 ---RRLEPGTEIAFYIP 551 + GT + +P Sbjct: 576 DVESEPDEGTTVRIRLP 592 >UniRef50_C6D7S5 Cache sensor signal transduction histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7S5_PAESJ Length = 586 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 71/237 (29%), Positives = 121/237 (51%), Gaps = 15/237 (6%) Query: 323 HQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISS 382 Q+ M + +++ + +E EL ALQ++INPHFL+N LN++ Sbjct: 343 RQLADRFNIMISTIKKLMRQIV------TEQESKRTYELEALQAQINPHFLYNTLNSVVR 396 Query: 383 SIRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVI 441 + +N + +I +LS+ R ++ K I I EL ++Y+ I+Q RF +K Sbjct: 397 MVGMNKNEEVTTMITSLSKLFRISL-GKGKSIITIADELEHARNYLVIQQMRFKNKFDFS 455 Query: 442 YDID-EEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGI 500 D E +N L++QPL+ENA+VHGI+P KG + + + + I VRD G G+ Sbjct: 456 IKADGEVLNYATLKLIVQPLIENALVHGIEPSVDKGHIWVEAKVDCDDIVIEVRDNGLGM 515 Query: 501 DPKVIERVEANE---MPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIP 551 + +++V A + G+ +G++NV R++L YG+ + LE GT + P Sbjct: 516 SEERLKQVTAGQVTSSKGSGVGVMNVQERIRLFYGQAYGLHFASELEEGTTVTIRFP 572 >UniRef50_A8RMQ3 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RMQ3_9CLOT Length = 620 Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 69/251 (27%), Positives = 133/251 (52%), Gaps = 19/251 (7%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 + S M + +I T + +E + EL+ALQ++INPHFL+N L++I S+ Sbjct: 378 LYDSFNHMTGEMRNLIDTIY------REQEKLRREELKALQAQINPHFLYNTLDSIIWSL 431 Query: 385 RLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 R+ + + +++ L+ + + ++ K + I I++E+ IK Y++I+ R+ +K Sbjct: 432 RMRQVEESIEMLTALTDFFKISLS-KGRDIITIEEEVKHIKSYLSIQHRRYQEKFDYDIH 490 Query: 444 IDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 +D ++C P L++QP+VENAI HGI+P + KG + I + V + V+DTG G+D Sbjct: 491 VDPSILSCRTPKLILQPVVENAIYHGIKPMEEKGYIYIHIFPQEGDVILQVQDTGMGMDE 550 Query: 503 KVIERVE------ANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQ 553 R+ +++ G G+ NV+ ++K++YG + + GT + I + Sbjct: 551 DTCRRLNRELDTISSDQQGTGYGVRNVNDKIKIVYGSKYGVTIESAMGEGTVVTLRI-GK 609 Query: 554 RTPVASQATLL 564 + + ++ L Sbjct: 610 KGEASDESDYL 620 >UniRef50_O31516 Sensor histidine kinase yesM n=2 Tax=Bacillus subtilis group RepID=YESM_BACSU Length = 577 Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 75/238 (31%), Positives = 124/238 (52%), Gaps = 17/238 (7%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 + M +++++ +E + + + EL+ALQ++INPHFL+N L +I+ Sbjct: 352 LNRHFTVMMKRINELMEENVEK------QLIIKETELKALQAQINPHFLYNTLESINWLA 405 Query: 385 RLNPDT-ARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 + N +++ +L LR +I +K D + I++E ++ Y+ I++ RF ++L D Sbjct: 406 KANQQKQISKMVESLGFLLRNSIHMKKD-IVTIQEEADIVRHYMTIQRFRFEERLKFTLD 464 Query: 444 IDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 ID+EV +C IP L +QPL ENAI + ++P + I + V I V D G G+D Sbjct: 465 IDDEVKHCLIPKLTLQPLAENAIQYALEPFTRPCAIRIQAKKAKGCVCITVEDNGPGMDG 524 Query: 503 KVIERVEANEMPGNKIGLLNVHHRVKLLYGE--GLHIRRL-EPGTEIAFYIPNQRTPV 557 +++E G IGL N+ R+ L +GE GL I E GT I IP + V Sbjct: 525 RILE-----STGGRGIGLWNIRERISLTFGEPYGLRIHSEHEKGTRIVITIPCRNEVV 577 >UniRef50_C1I2X2 Multi-sensor signal transduction histidine kinase n=2 Tax=Clostridiales RepID=C1I2X2_9CLOT Length = 597 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 72/238 (30%), Positives = 124/238 (52%), Gaps = 16/238 (6%) Query: 323 HQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISS 382 + +++ M ++ ++ + +E K+EL ALQ++INPHFL+N L++I Sbjct: 355 QHLGKAIKSMVKQMNMLMENIM------NEQEAKRKSELNALQAQINPHFLYNTLDSIIW 408 Query: 383 SIR-LNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVI 441 I N D A ++ L+R+ R ++ K I +K EL + Y+ I+ R+ +K T Sbjct: 409 MIENENYDGAIVMVTALARFFRISLS-KGKNVITVKDELEHARYYLTIQNIRYKNKFTYD 467 Query: 442 YDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGI 500 +EE +N L+IQPL+ENAI HG++ G G + + + + I + D G G+ Sbjct: 468 IKAEEEVLNLTSIKLIIQPLIENAIYHGMEYMSGDGDILVQAYLKNDELYIDIIDNGLGM 527 Query: 501 DPKVIERVEANE----MPGNKIGLLNVHHRVKLLYGEGLHIR---RLEPGTEIAFYIP 551 +V +++ NE G+ IGL NVH R+KL +G+ + + GT I ++P Sbjct: 528 PQEVADKLLTNENGVQKKGSGIGLRNVHERIKLYFGDSYGLEIYSEPDEGTTIRIHMP 585 >UniRef50_Q893H6 Two-component sensor kinase yesM n=1 Tax=Clostridium tetani RepID=Q893H6_CLOTE Length = 577 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 75/252 (29%), Positives = 129/252 (51%), Gaps = 20/252 (7%) Query: 313 GTLKIYYCHAHQ-----ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSK 367 G YY + + +M + ++I+ +V + AELR LQS+ Sbjct: 323 GNFDSYYEIKNNDEISILGQVFNQMLTDIKRLINKVYQV------EKQKRSAELRVLQSQ 376 Query: 368 INPHFLFNALNAISS-SIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDY 426 INPHFL+N L+ I ++ N +I LS + R ++ E I I E+ + +Y Sbjct: 377 INPHFLYNTLDTIQWKALEYNAFEVVDMINYLSNFFRISLS-DGKEFITISDEVAHVSNY 435 Query: 427 IAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAEC 485 + I++ R+ DK++ D+D ++ IP L++QPLVEN+I HG++ K KG++ +S++ Sbjct: 436 LEIQKIRYKDKISYSMDVDSSLDQYLIPKLIVQPLVENSIYHGLKLQKHKGIINVSISSK 495 Query: 486 GNRVRIAVRDTGHGIDPKVIERVEAN---EMPGNKIGLLNVHHRVKLLYGEGLHIR---R 539 + I V D G G+D + + + N + N GL N++ R+KL +G+ I Sbjct: 496 DGFLFIKVIDNGLGMDVEQLRTLRKNLWESIETNHYGLYNINERLKLAFGKKYSIEIKSE 555 Query: 540 LEPGTEIAFYIP 551 L+ GT++ IP Sbjct: 556 LKIGTQVLLRIP 567 >UniRef50_UPI000178A843 multi-sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A843 Length = 610 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 71/244 (29%), Positives = 123/244 (50%), Gaps = 23/244 (9%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSS 383 Q++S M + Q++ + + +E K EL ALQ++INPHFL+N LN++ Sbjct: 361 QLSSRFNLMLNKIRQLMKQIV------KEQESKRKYELEALQAQINPHFLYNTLNSVVRM 414 Query: 384 I-RLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIY 442 + + +I +LS+ R ++ K I +++EL + Y+ I+Q R+ K Sbjct: 415 VGMSKKEEVITMITSLSKLFRLSLS-KGKTSISVREELEHARHYLTIQQMRYKQKFDFAI 473 Query: 443 DIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGID 501 + DE ++C L++QPL+ENAIVHGI+ +G + I A G + + V D G G+ Sbjct: 474 EADEAALSCYTLKLVLQPLIENAIVHGIEYMVDQGHIRIGAAVKGEWLEMTVTDNGVGMT 533 Query: 502 PKVIERVEANEMP-----------GNKIGLLNVHHRVKLLYGEGLHIR---RLEPGTEIA 547 P+++E + + G+ + + NVH R++L YG+ + E GT + Sbjct: 534 PEMVEGILDAKETPHNPVQFINTAGSGVAVRNVHDRIRLYYGKRYGLEFESEQEAGTTVR 593 Query: 548 FYIP 551 IP Sbjct: 594 IRIP 597 >UniRef50_C5EKG5 Histidine kinase internal region n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EKG5_9FIRM Length = 597 Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 65/242 (26%), Positives = 123/242 (50%), Gaps = 17/242 (7%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSS 383 + M + ++ +R R+ +AE ALQ +I PHFL+N L++I+ Sbjct: 358 DLIHGFNHMVYKVDDLM------ARERDTRQKLVQAEFNALQDQIKPHFLYNTLDSINWM 411 Query: 384 IRLN-PDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIY 442 R+N D ++I +L+ +LR + + + I + +E+ ++ YI+I++ R+ L Sbjct: 412 ARMNRTDKVSEMIDSLTGFLRIGLS-RGKDFISLAEEIRHVESYISIQKIRYDRILDYKI 470 Query: 443 DIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGID 501 D+ E++ + +++QPLVENAI HGI+ G +TI+ E +R+ + V D G G+ Sbjct: 471 DVSEDLMGYRVIKMILQPLVENAIYHGIKEKDEHGTITITGEETEDRLVLCVSDDGLGMK 530 Query: 502 PKVIERVEANEMPG-----NKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQ 553 P+ + ++ A G N G++NV R++ +GE + GT++ +P + Sbjct: 531 PERLAQIRAMMASGARYNDNAYGVINVQRRIQAYFGEEYGLDFRSEYTKGTQVYITLPKK 590 Query: 554 RT 555 Sbjct: 591 EE 592 >UniRef50_C7H1K0 Putative sensor histidine kinase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1K0_9FIRM Length = 615 Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 72/250 (28%), Positives = 123/250 (49%), Gaps = 12/250 (4%) Query: 314 TLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRA-EQLREMANKAELRALQSKINPHF 372 + + +Q+ S EM Q E + A E + + +AEL+ALQ++INPHF Sbjct: 351 EIALLTKSYNQMLRSSNEMLDREKQYSHQLEEKNDAIELEQRLKRRAELQALQAQINPHF 410 Query: 373 LFNALNAISSSIR-LNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQ 431 L+N L++I + Q++ +L+ + R + + E I +++E+ ++ Y+ I++ Sbjct: 411 LYNTLDSIRWKAEAAGAEDISQMVRDLANFFRIGLS-RGREIIPLEQEICHVRSYLDIQK 469 Query: 432 ARFGDKLTVIYDIDEEVNCC-IPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVR 490 R+GD+L I EE+ LLIQPL EN+I HGI+ KG + I+ E V Sbjct: 470 MRYGDRLDYQIRIPEELKKLYTVKLLIQPLAENSIYHGIKESDRKGTILITAGEEPGGVY 529 Query: 491 IAVRDTGHGIDPKVIERVEANEMPG-----NKIGLLNVHHRVKLLYGEGLHIRR---LEP 542 + VRD G GI + + + A+ G G+ NV+ R++L +G + Sbjct: 530 LCVRDDGLGISQETLTILNADLKRGVTVSDGGYGIFNVNERIRLYFGRDYGLELRSCTGE 589 Query: 543 GTEIAFYIPN 552 TE ++P Sbjct: 590 WTEAVIHLPK 599 >UniRef50_B8FU12 Signal transduction histidine kinase, LytS n=2 Tax=Desulfitobacterium hafniense RepID=B8FU12_DESHD Length = 645 Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats. Identities = 80/213 (37%), Positives = 123/213 (57%), Gaps = 3/213 (1%) Query: 354 EMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKD-DE 412 + AE+ L+S+I PHFL+NALN+I++ + PD A ++ LS YLR + + K D Sbjct: 433 KRTQDAEIAFLRSQIKPHFLYNALNSIAALCKEAPDQAEDVVIQLSEYLRGSFDFKTLDS 492 Query: 413 QIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPC 472 +KKE ++ Y+ IE+ RFG +L V YDIDE +N IP L++QPLVENA+ HG+ Sbjct: 493 LTTVKKETELLEAYLNIEKVRFGKRLNVEYDIDESINFPIPPLILQPLVENAVRHGLMSG 552 Query: 473 KGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYG 532 G V IS+ + V ++ D G G++P ++R+ N +GL N++ R++L+YG Sbjct: 553 VSGGTVKISIKKEMANVVFSIEDDGIGMEPSQVKRLLEQAPDENGVGLWNINQRLRLIYG 612 Query: 533 EGLHI-RRLEPGTEIAFYIP-NQRTPVASQATL 563 L + GT ++F +P N R S L Sbjct: 613 NELEVWSERGVGTRVSFQLPWNSRETSLSHGNL 645 >UniRef50_Q9KBL7 Two-component sensor histidine kinase n=1 Tax=Bacillus halodurans RepID=Q9KBL7_BACHD Length = 597 Score = 253 bits (648), Expect = 9e-66, Method: Composition-based stats. Identities = 90/277 (32%), Positives = 147/277 (53%), Gaps = 17/277 (6%) Query: 285 IKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQL 344 + + +H + I+ + L K VV G +I Q++ +M L +I Sbjct: 318 LISKRLSHLSERINQVASGDLKTKIVVDGKDEI-----GQLSVQFNQMVANLRSLIHQVH 372 Query: 345 EVSRAEQL-REMANKAELRALQSKINPHFLFNALNAISSSIRLNPD-TARQLIFNLSRYL 402 E +R ++L + N+ +L+ L S+INPHFLFN L +I + + +++ L + + Sbjct: 373 ETNRQKRLLEKSQNEIKLKMLASQINPHFLFNTLESIRMKSHMKGETEIAKVVKQLGKLM 432 Query: 403 RYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLV 461 R ++E+ I ++ EL ++ Y+ I+ R+GD+L ID + I L+IQPLV Sbjct: 433 RKSLEVTGHH-IPLRNELDMVRCYLEIQTFRYGDRLHYELYIDPQSEMVEILPLIIQPLV 491 Query: 462 ENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEA-----NEMPGN 516 ENA++HG++ + G VTIS GN + + V D G G+D + +E ++ E+ GN Sbjct: 492 ENAVIHGLERTEDGGTVTISTIVNGNDLTVIVNDDGCGMDEEKLEAIQNMLHHPQEVDGN 551 Query: 517 KIGLLNVHHRVKLLYGE--GLHIRRL-EPGTEIAFYI 550 KIGLLNVH R++L YG+ GL I GT + F I Sbjct: 552 KIGLLNVHKRLQLTYGKTSGLIIESAKGKGTCVRFTI 588 >UniRef50_C6D2L4 Cache sensor signal transduction histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D2L4_PAESJ Length = 596 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 62/235 (26%), Positives = 121/235 (51%), Gaps = 15/235 (6%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSS 383 + + M V + +++S + + +E+ K+EL ALQ++INPHFL+N L++I Sbjct: 355 SLARTFNLMVVKIEELMSQVV------REQEIKRKSELTALQAQINPHFLYNTLDSIIWM 408 Query: 384 IR-LNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIY 442 D + L+R R +I + E + I+ E+ + +Y+ I++ R+ DKL Sbjct: 409 AEGKKTDEVVLMTSALARLFRSSIS-RGQELVSIRTEIEHVANYLTIQKIRYKDKLDFHI 467 Query: 443 DIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGID 501 D+D ++ +L+QPL+ENAI HGI+ G G + ++ + + + V D G G++ Sbjct: 468 DVDPDIYAYRTLKVLLQPLLENAIYHGIKNRIGTGTIQVTGGKRDGYIWLEVSDNGVGME 527 Query: 502 PKVIERV---EANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYI 550 + + + ++ +G++NVH R++L +G+ + + GT + I Sbjct: 528 AEALRTILEPRRSDRESKGVGVVNVHERIQLYFGKDYGLTYKSVQDEGTTVTVRI 582 >UniRef50_A6M1Q9 Multi-sensor signal transduction histidine kinase n=3 Tax=Bacteria RepID=A6M1Q9_CLOB8 Length = 602 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 66/238 (27%), Positives = 120/238 (50%), Gaps = 16/238 (6%) Query: 323 HQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISS 382 + +++ M + ++ + +E K+EL ALQ++INPHFL+N L++I Sbjct: 358 QHLGKAIRSMVNQMHTLMDNIM------IEQESKRKSELNALQAQINPHFLYNTLDSIIW 411 Query: 383 SIR-LNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVI 441 I N D A ++ L++ R ++ K I ++ E+ ++Y+ I+ R+ +K T Sbjct: 412 MIENENYDGAIIMVTALAKLFRISLS-KGKNIITVRDEIEHARNYLTIQNIRYKNKFTYN 470 Query: 442 YDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGI 500 ++DE+ +N L+IQPL+ENAI HG++ G G + + N + I V D G G+ Sbjct: 471 IEVDEKVLNYGSIKLIIQPLIENAIYHGMEFMGGDGEILVKAYAKDNELYIDVVDNGLGM 530 Query: 501 DPKVIERVEAN----EMPGNKIGLLNVHHRVKLLYGEGLHIR---RLEPGTEIAFYIP 551 V + E + IGL NV+ R++L +G+ + + GT + ++P Sbjct: 531 LQDVANSLLTGESKIEKKSSGIGLKNVNERIQLYFGKRYGLEIYSEPDEGTTVRIHMP 588 >UniRef50_C5EU49 Multi-sensor signal transduction histidine kinase n=3 Tax=Clostridiales RepID=C5EU49_9FIRM Length = 598 Score = 251 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 72/289 (24%), Positives = 138/289 (47%), Gaps = 27/289 (9%) Query: 294 TPEIHSMLVIPLWE-----KGVVTGTLKIYYCHA-----HQITSSLQEMAVGLSQIISTQ 343 I + + P+ E + G L++ A + +S+Q MA + ++++ Sbjct: 313 NSYISTRITDPIKELEKAVNEIEEGNLEVEVKSAGSYEIQHLGTSIQSMARRIRKLMNDI 372 Query: 344 LEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPD-TARQLIFNLSRYL 402 + E ++E LQS+INPHFL+N L+ I I A +++ L+R+ Sbjct: 373 VA------EHESKRRSEFDTLQSQINPHFLYNTLDIIVWMIENEKQSEAVKVVTALARFF 426 Query: 403 RYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLV 461 R ++ K I ++ EL +++Y+ I+ R+ +K T + DE+ + L++QPLV Sbjct: 427 RISLS-KGKSIIPVRDELEHVRNYLMIQHMRYKNKFTYAIEADEDVLELASLKLMLQPLV 485 Query: 462 ENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEA-----NEMPGN 516 ENAI HG++ G G + + + + ++V D G G+ + ++R+ + G+ Sbjct: 486 ENAIYHGMEFMDGDGEILVRAWRREDDLYMSVSDNGLGMTREQVDRLFSATDHMPSGRGS 545 Query: 517 KIGLLNVHHRVKLLYGEGLHIR---RLEPGTEIAFYIPNQRTPVASQAT 562 IG+ NV+ R+KL +G G + + GT + ++P A + Sbjct: 546 GIGVKNVNERIKLYFGTGYGLEIQSEPDEGTTVTAHLPAISYQEAKKEE 594 >UniRef50_B0G4V0 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0G4V0_9FIRM Length = 518 Score = 251 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 71/237 (29%), Positives = 119/237 (50%), Gaps = 17/237 (7%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 + +MA + ++ + + + KA+LR LQ +INPHFL+N L+ I I Sbjct: 262 LADRFNDMAGNIQTLV------VKVREDEQKMRKADLRLLQEQINPHFLYNTLDNIVWLI 315 Query: 385 RLN-PDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 N PD A +++ LS + R + K E I I++E I Y+ I++ R+ D L Sbjct: 316 EGNEPDEAVEMVVTLSEFFRLVLS-KGKEFITIRQEEQHISSYLQIQEKRYHDILDYHIY 374 Query: 444 IDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 ID E+ IP L +QPLVENA+ HGI+ + +G++ I+ + G + + V D G G+D Sbjct: 375 IDPEIYEYQIPKLTLQPLVENALYHGIKYKRSRGMIEITGTKEGENLYLTVADDGVGMDE 434 Query: 503 KVIERVEAN-----EMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIP 551 ++++ + + GL NV+ R+++ +G + GT I IP Sbjct: 435 DELKKLGKEISRPCKETESGFGLANVNERIRMYFGAEFGMKIWSEKGSGTRITIEIP 491 >UniRef50_UPI0001789966 multi-sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789966 Length = 598 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 78/259 (30%), Positives = 126/259 (48%), Gaps = 20/259 (7%) Query: 306 WEKGVVTGTLKIYYC--HAHQIT---SSLQEMAVGLSQIISTQLEVSRAEQLREMANKAE 360 V G I H+ +I+ S M + + +++ + +E+ K+E Sbjct: 332 KMMEVEKGNFDIRVPVGHSREISGLARSFNVMVLKIKELM------YQIVVEQEIKRKSE 385 Query: 361 LRALQSKINPHFLFNALNAISSSIRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKE 419 L ALQ++INPHFL+N L++I D + L+R R ++ K E I I E Sbjct: 386 LNALQAQINPHFLYNTLDSIIWMAESKKHDEVILMTSALARLFRASLS-KGKELIPIATE 444 Query: 420 LYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVV 478 + I +Y+ I+Q R+ DK+T DID + +L+QPLVENAI HGI+ +G G + Sbjct: 445 VEHITNYLKIQQMRYQDKITFALDIDRGLYPYLTLKVLLQPLVENAIYHGIKNKEGPGTI 504 Query: 479 TISVAECGNRVRIAVRDTGHGIDPKVIERVEANEM---PGNKIGLLNVHHRVKLLYGEGL 535 TI+ R+ V+D G G+D +E + ++ N +G+ NVH R++L +G Sbjct: 505 TITGVRRDTRIEFQVKDDGIGMDQSKVETLLTSKEGTRSRNSVGIANVHQRIQLYFGTEY 564 Query: 536 HI---RRLEPGTEIAFYIP 551 + GT + IP Sbjct: 565 GLSYASVPGSGTSVTLVIP 583 >UniRef50_A8MKS8 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MKS8_ALKOO Length = 580 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 79/275 (28%), Positives = 130/275 (47%), Gaps = 27/275 (9%) Query: 297 IHSMLVIPLWE-----KGVVTGTLKIYYCHAH-----QITSSLQEMAVGLSQIISTQLEV 346 + + +V P+ E K V G L I Y + Q+ +M + +I T Sbjct: 303 LSASIVKPVKELQGLMKDVEGGNLDIVYSNPREDEIGQLGEGFNKMVGQIKNLIHTVY-- 360 Query: 347 SRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI-RLNPDTARQLIFNLSRYLRYN 405 ++ +AEL+ALQ++I PHFL+N L+ I ++ L+ R + Sbjct: 361 ----IEQKNKREAELKALQAQIQPHFLYNTLDTIQWMALEHQAHDIVDMVDALTNLFRIS 416 Query: 406 IELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENA 464 + +E I +E+ I+ Y+ +++ R+ DKL DE++ C + L+IQPLVENA Sbjct: 417 LS-GGEEIISCAEEIKHIESYLFVQKVRYEDKLEYEIIWDEQLKECKVLKLVIQPLVENA 475 Query: 465 IVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVE-----ANEMPGNKIG 519 I HGI+ KG G + I G + ++V D G GI+ K ++ ++ G G Sbjct: 476 IYHGIKRKKGPGRILIIGRILGKDMEVSVIDDGIGIEHKKRLQIMDVLEGRSKGEGTGYG 535 Query: 520 LLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIP 551 + NV+ R+KL++GE I GTE+ P Sbjct: 536 MFNVNERIKLMFGEEYGIHITSEYGQGTEVVLRHP 570 >UniRef50_D1PQX9 Putative sensor histidine kinase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQX9_9FIRM Length = 493 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 72/247 (29%), Positives = 125/247 (50%), Gaps = 14/247 (5%) Query: 323 HQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISS 382 ++ ++EMA L ++ A Q + + EL LQ++INPHFL+N ++ I Sbjct: 239 RTLSEGVEEMAGRLHTLL------EEATQKQATLRRMELALLQAQINPHFLYNTMDTIIW 292 Query: 383 SIRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVI 441 I A Q++ +LS + R+++ K + I + +E ++ Y+ I+QAR+ D L Sbjct: 293 LIEAGKSQEATQMVSDLSNFFRHSLS-KGKDIITLAEEESHVRSYLQIQQARYADILRYT 351 Query: 442 YDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGI 500 D+ ++ IP L +QPLVENA+ HGI+ +G G + I + G + + V D G G+ Sbjct: 352 IDLPDKFGAVRIPKLTLQPLVENALYHGIKMKRGMGHIYILGKQEGEDLVLQVTDDGAGM 411 Query: 501 DPKVIERVEANEMPGN--KIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRT 555 + ++++ + G GL +H R++LL+G G + R GT + IP Q Sbjct: 412 SEERLQQLIRSMENGERVGFGLSTIHERLRLLFGPGYGLTIHSREGVGTTVFVRIPRQTE 471 Query: 556 PVASQAT 562 + T Sbjct: 472 KEETGET 478 >UniRef50_C6CTF8 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF8_PAESJ Length = 595 Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats. Identities = 79/282 (28%), Positives = 137/282 (48%), Gaps = 17/282 (6%) Query: 281 GKIIIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQII 340 G I + I + L + G +I Q++ M ++ ++ Sbjct: 313 GVSTIITKRMLRLSKHITKVATGKLDIVMEIDGKDEI-----GQLSRQFNSMVSSINGLV 367 Query: 341 STQLEVSR-AEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDT-ARQLIFNL 398 E ++ QL N+ +L+ + S+INPHFLFNAL +I L + Q++ L Sbjct: 368 EEVQESNKMKRQLEAKQNEIKLKMMASQINPHFLFNALESIRMKAHLKGEKEISQVVRLL 427 Query: 399 SRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLI 457 + +R +IE+ + E+ ++ Y+ I++ R+ D+L+ +D V IP L+I Sbjct: 428 GKLMRRSIEVS-QRLTPLADEMDIVRCYLDIQKFRYEDRLSYELHVDPVVERVSIPPLII 486 Query: 458 QPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV-----EANE 512 QPLVENA++HG + G+VT+ G+ VR+ V D G G+ + I+++ E + Sbjct: 487 QPLVENAVIHGFENKVEGGMVTVRAVREGDYVRVDVIDNGAGMTREKIDKLTQHLNETED 546 Query: 513 MPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIP 551 N+IGL NVH R++L YG + GT+++F +P Sbjct: 547 AENNRIGLRNVHLRLQLTYGPEHGLQYESEPGIGTKVSFTLP 588 >UniRef50_A9KK43 Histidine kinase internal region n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KK43_CLOPH Length = 569 Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 116/239 (48%), Gaps = 13/239 (5%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 ++ S M V + ++++ + + K EL+ALQ++INPHFL+N L+A Sbjct: 329 TEIQALSQSFDHMVVQIQELMT------KVRKEEITLRKTELKALQAQINPHFLYNTLDA 382 Query: 380 ISSSIRLN-PDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 I A +++ L++ R +I K E I I+KE+ K Y+ IE R+ ++ Sbjct: 383 IGWLCEEERSQDAVEMVNALAKLFRISIS-KGHELITIEKEVEHAKSYLKIENFRYKNQF 441 Query: 439 TVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTG 497 + ++EE + + +QP++ENAI HG+ G + I + + + V D G Sbjct: 442 VYEFIVEEECLPYYCNKITLQPIIENAIYHGLNRMVDDGHIGIHIYAEEEDIVMEVIDNG 501 Query: 498 HGIDPKVIERVEANE-MPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPN 552 G+ P+ I + E IG+ NV+ R+K+ +GE I L+ GT + +P Sbjct: 502 VGMTPEQIHSILYKEPGDKTGIGIKNVNDRIKIYFGEKYGILIESELDEGTCVKIRMPK 560 >UniRef50_C4IM92 Multi-sensor signal transduction histidine kinase n=3 Tax=Clostridium RepID=C4IM92_CLOBU Length = 595 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 73/237 (30%), Positives = 122/237 (51%), Gaps = 21/237 (8%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 I S + +M + + IIS Q E K+EL ALQ++INPHFL+N L++I I Sbjct: 364 IRSMVNQMNILMDNIISEQ----------EAKRKSELNALQAQINPHFLYNTLDSIIWMI 413 Query: 385 R-LNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 N D A ++ L+R R ++ K I ++ E+ +K+Y+ I+ R+ +K + Sbjct: 414 ENENYDKAIIMVTALARLFRISLS-KGKNIIPLRYEIEHVKNYLTIQSMRYKNKFIYEFQ 472 Query: 444 ID-EEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 + E +N L+IQP+VENAI HG++ G G + I N + I V D G G+ Sbjct: 473 CENETMNLASIKLVIQPVVENAIKHGMELMDGDGEILIKSYIDNNELYIDVIDNGLGMTQ 532 Query: 503 KVIERVEANEMP-----GNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIP 551 + +E + E G+ +G+ NV+ R+K+ +G+ I + GT + ++P Sbjct: 533 EQVESILMGENKSKNSNGSGLGIKNVNERIKIYFGDKYGIKIFSEPDEGTTVRIHMP 589 >UniRef50_C6IZN7 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZN7_9BACL Length = 597 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 83/279 (29%), Positives = 141/279 (50%), Gaps = 17/279 (6%) Query: 284 IIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQ 343 + N + ++ + + L + G +I Q++ M + +++ Sbjct: 320 FLTTNRMLRLSRHLNRLALGDLNVVSRIDGNDEI-----GQLSRQFNYMVDSIRRLMDQV 374 Query: 344 LEVSRAEQLREMA-NKAELRALQSKINPHFLFNALNAISSSIRLNPDT-ARQLIFNLSRY 401 +E + E+A + +L+ + S+INPHFLFNAL +I + L D ++ L + Sbjct: 375 VEKTEQNNALELAQREIKLKMMASQINPHFLFNALESIRMNAHLKGDKEIANVVRLLGKM 434 Query: 402 LRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPL 460 +R N+E+ E +K+EL + Y+ I++ R+ D+LT ID +P L+IQPL Sbjct: 435 MRKNLEV-GRESTPLKEELEMVSSYLEIQKFRYEDRLTYTLSIDPAARSIRVPPLIIQPL 493 Query: 461 VENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVE-----ANEMPG 515 VENA+VHG++ + V +++ VR++V+D G G+ P+ ++ V E Sbjct: 494 VENAVVHGVEDKEEGVHVEVNIQRDEGLVRVSVQDNGMGMTPERLDEVMRFISGTKEPEQ 553 Query: 516 NKIGLLNVHHRVKLLYGE--GLHI-RRLEPGTEIAFYIP 551 +IGL NVH R+ L YGE GL I GT+I+F IP Sbjct: 554 GRIGLRNVHQRLVLSYGEEHGLQIVSEYGVGTKISFTIP 592 >UniRef50_Q9K6Q0 Two-component sensor histidine kinase n=2 Tax=Bacillus RepID=Q9K6Q0_BACHD Length = 605 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 78/256 (30%), Positives = 124/256 (48%), Gaps = 23/256 (8%) Query: 323 HQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISS 382 +++ + M + +I E ++AEL+ALQS+INPHFLFN L A+ Sbjct: 351 NELNDTYNRMVETTNYLIKVVYE------QELTQSRAELKALQSQINPHFLFNTLEALYW 404 Query: 383 SIRLNPDTARQLIFNLSRYLRYNIE-LKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVI 441 S+ + +++ L+ RY I +K D+ + + +E I+ Y+ I + R+ +L Sbjct: 405 SLEEKDEEQAEVVIALAELFRYTISDVKGDDWVALHEEFDHIERYLHIMKLRYDHRLAWE 464 Query: 442 YDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVA--ECGNRVRIAVRDTGH 498 ++D + IP LLIQP+VENAI+HGI G V +S V I VRD G Sbjct: 465 IELDPSLREVQIPKLLIQPVVENAIIHGIGNKVDGGKVQVSAYTSVKQGYVNITVRDDGQ 524 Query: 499 GIDPKVIERVE-------ANEMPGNKIGLLNVHHRVKLLYGEGLH-----IRRLEPGTEI 546 G+D K +++E + + I L+N+ R+ L Y H R GT + Sbjct: 525 GMDEKTKQKLEHSLETRVGHPEKRSGIALVNIRQRLDLCYASDPHTSIELTSRHGVGTTV 584 Query: 547 AFYIPNQRTPVASQAT 562 F IP + P + +AT Sbjct: 585 TFTIPKKEAP-SDEAT 599 >UniRef50_A9KI48 Histidine kinase internal region n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KI48_CLOPH Length = 604 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 81/260 (31%), Positives = 129/260 (49%), Gaps = 24/260 (9%) Query: 318 YYCHAHQITSSLQEMAVGLSQII---STQLEVSRAEQL-----REMANKAELRALQSKIN 369 Y + S M + ++ + +E + E+ +E AE++ALQ++IN Sbjct: 344 YKDEVGNLAKSFNYMVEEIEGLVTELNLHIEALKEEKEALKVVQEQKRIAEIKALQAQIN 403 Query: 370 PHFLFNALNAISS-SIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIA 428 PHFL+N LN I+ + L +L + R + K E I I++EL +K Y+ Sbjct: 404 PHFLYNTLNTITWQAADQGAKEISILSKSLGSFFRIALS-KGREIITIREELEHVKSYLE 462 Query: 429 IEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGN 487 I++ R+ K+ +ID+E+ +C I +L+QPLVENAI HGI+ +G G ++I+ + Sbjct: 463 IQKIRYKSKINYSIEIDDEIKDCSIIKILLQPLVENAIYHGIKTKEGHGNISIAAVMKMD 522 Query: 488 RVRI-----AVRDTGHGIDPKVIERVEANEMPG-----NKIGLLNVHHRVKLLYGE--GL 535 + I V D G GI+ +E + A G N G+ NV+ R+KL YGE GL Sbjct: 523 ELTIPAIKLCVEDDGLGIEKNQLEILNAGLSKGIVDSKNGYGIYNVNQRLKLTYGEIYGL 582 Query: 536 HIRR-LEPGTEIAFYIPNQR 554 + L T IP Q+ Sbjct: 583 SLESKLGEWTRATIIIPVQK 602 >UniRef50_A8RW55 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RW55_9CLOT Length = 584 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 78/242 (32%), Positives = 126/242 (52%), Gaps = 16/242 (6%) Query: 318 YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNAL 377 Y + + M +I + +E +AEL+ LQ +INPHFL+N L Sbjct: 339 YKDELAVLGNKFNNMMDFTRHLIVVN------NKEQENLREAELKTLQMQINPHFLYNTL 392 Query: 378 NAISSSIRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGD 436 + IR N + A +I +LS++ R + + I +++EL +K+Y+ I+ R+ D Sbjct: 393 ETVIWLIRSNENEKAISVITSLSKFFRIGLS-RGRNIITLREELEHVKEYVKIQNTRYRD 451 Query: 437 KLTVIYDIDEE--VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISV-AECGNRVRIAV 493 K+ IDE+ ++ IP L +QPLVENAI HGIQ G ++I + E G+R+RI+V Sbjct: 452 KIDFSIHIDEDSMLDYPIPKLTLQPLVENAIYHGIQEKPEGGAISIEIVHETGDRIRISV 511 Query: 494 RDTGHGIDPKVIERVEAN--EMPGNKIGLLNVHHRVKLLYG--EGLHIRR-LEPGTEIAF 548 D G G+ P +ER++ EM + G+ N + R++ +G L I GT ++F Sbjct: 512 IDDGIGMTPAQLERLQEGLKEMAVSGFGMYNTNQRLRNYFGRESALRIESQFGEGTNVSF 571 Query: 549 YI 550 I Sbjct: 572 SI 573 >UniRef50_C4GDI5 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GDI5_9FIRM Length = 595 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 70/247 (28%), Positives = 130/247 (52%), Gaps = 18/247 (7%) Query: 318 YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNAL 377 Y Q+ S MA ++ +++ Q +S + + AE ALQ++INPHFL+N + Sbjct: 356 YKDEVGQLVDSYNYMAGRINALVAEQQRISEEKTI------AEFNALQAQINPHFLYNTM 409 Query: 378 NAISSSIR-LNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGD 436 + I + D +++ LSR+ + + K D I E+ Y+ ++ RF + Sbjct: 410 DMIHWMAQARQYDKVSEIVMRLSRFYKLTLS-KKDPVSTIGDEIEHASIYVQLQNMRFEN 468 Query: 437 KLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGI-QPCKGKGVVTISVAECGNRVRIAVR 494 + ++ D+ +E+N C IP L +QP++ENAI+HGI + G + I+ E + + + + Sbjct: 469 AIDLVVDVPDELNSCHIPKLTLQPILENAILHGILEKNPPTGTIVITAWE-DDALYLLIS 527 Query: 495 DTGHGIDPKVIERVEA----NEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIA 547 D G G+D ++++ + ++ G+ + + N+H R++LLYGEG + GTE+ Sbjct: 528 DDGVGMDQELLDHLLTYTPMSKASGSNVAIYNIHSRLRLLYGEGYGLSYQSIPGRGTEVT 587 Query: 548 FYIPNQR 554 IP +R Sbjct: 588 IRIPRER 594 >UniRef50_C6LLN0 Putative sensor histidine kinase n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LLN0_9FIRM Length = 603 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 75/244 (30%), Positives = 129/244 (52%), Gaps = 19/244 (7%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSS 383 ++T M + +I+ R +L+ A L+ALQ++INPHFL+N L +I+ Sbjct: 363 ELTDCFNSMLDAIDDLIT------REYKLKLQERDANLQALQNQINPHFLYNTLESITMM 416 Query: 384 IRLNPDT-ARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIY 442 +N DT +++ +L +++R+ + + D + + +EL +++Y+ I+ R+ +++ Sbjct: 417 AEINDDTDVAEMVTDLGKFMRFTLTTR-DAMVRLSEELACVENYVQIQNVRYDHCISLSV 475 Query: 443 DIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGID 501 D E++ + I L IQP+VENAI+HG + I V E + + I + D G G+D Sbjct: 476 DCPEKLADNRIVKLSIQPVVENAILHGTGGAGSGIHLRIRVREENSDMEILIADDGQGMD 535 Query: 502 PKV-------IERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIP 551 P+ +E+ E E PG IGL NVH R+KL YGE + + GTE+ +P Sbjct: 536 PETLAGVIKNLEQGEETERPGQSIGLKNVHQRIKLRYGEKYGLKITSKPGKGTEVRLLLP 595 Query: 552 NQRT 555 R Sbjct: 596 CSRE 599 >UniRef50_C6J7M5 Histidine kinase internal region n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7M5_9BACL Length = 579 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 63/238 (26%), Positives = 121/238 (50%), Gaps = 17/238 (7%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 + M+ +S++I + E + + EL+AL ++INPHF++N+L +I+S Sbjct: 339 LVDGFNRMSTQISELI------EQVETEQARKKEFELQALVAQINPHFIYNSLESINSLA 392 Query: 385 RLNPDT-ARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 L + +++ +L + LR +I ++ + I + E+ ++ Y+ I++ RF ++ + Sbjct: 393 VLQGNKEISKMVVSLGKLLRISIS-ENQQLITLAMEMEHVRHYLDIQKFRFEEQFDYQIE 451 Query: 444 IDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 I E + + L++QP+VENA+ H I+P K KG+++I+ E + I V D G G Sbjct: 452 IPESLKHYLTQKLIVQPIVENALYHAIEPMKEKGLISITAKEDDRDIMIDVTDNGPGFSL 511 Query: 503 KVIERVEANEM-----PGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPN 552 + + + + G +GL NVH R+++ +G I G+ I IP Sbjct: 512 DRLMNLWSKDEGNKNYRGTGVGLRNVHERLRIRFGSRYGILICSSPGHGSTIRIRIPK 569 >UniRef50_A1TDT4 Signal transduction histidine kinase, LytS n=9 Tax=Actinomycetales RepID=A1TDT4_MYCVP Length = 409 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 98/369 (26%), Positives = 170/369 (46%), Gaps = 26/369 (7%) Query: 207 KLALDIANKTLPLFRH-VNSESLRKVCEIIRDDIHADAVAITNTDH-VLAYVGVGEHNYQ 264 AL A+ R +N++S + +RD AD +A+ + D VLA E Sbjct: 40 HAALHTASLAARALRQGLNTDSAQTAAPFLRDLTGADGLALFDGDGAVLA-----EDALD 94 Query: 265 NGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSMLVIPLW-EKGVVTGTLKIYYCHAH 323 + + I +++ PL E G + G L + + Sbjct: 95 DALWDDDVRDACDDAAHES-ISGQRRVMAHAGTSAVVAQPLLAESGDLLGVLVVVTTRSP 153 Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSS 383 + +++ ++Q+E++ + R ++AE+ AL+++I+PHF++NALN I+S Sbjct: 154 --GPGMLGAVGEVARYAASQIELAELDASRARLDRAEVLALRAQISPHFIYNALNTIASF 211 Query: 384 IRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 +R +PD AR+LI + + RY+ + + +EL I Y+ +E+ARFG L V Sbjct: 212 VRTDPDRARELILEFADFTRYSFRAAG-QFTTLAEELRNIDRYLTLERARFGTALKVTLQ 270 Query: 444 IDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 + E +N +P L +QPLVENA+ HG G G + + + G+ I V D G G+DP Sbjct: 271 VAPEVLNVVVPFLALQPLVENAVRHGFAGR-GSGSIELVARDEGSDCVITVEDDGVGMDP 329 Query: 503 KVIER---------VEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYI 550 + A+E G +GL NV HR++ +G + + GT++ + Sbjct: 330 DALRSGPGDALSDGAPASEGAGAHVGLTNVDHRLRAAFGNDYGLVVETAIGAGTKVIMRV 389 Query: 551 PNQRTPVAS 559 P R+ V + Sbjct: 390 PKFRSGVRA 398 >UniRef50_C7H4I2 Periplasmic sensor signal transduction histidine kinase n=2 Tax=Faecalibacterium prausnitzii RepID=C7H4I2_9FIRM Length = 495 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 79/253 (31%), Positives = 135/253 (53%), Gaps = 15/253 (5%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAE----QLREMANKAELRALQSKINPHFLFNALNA 379 ++T + +M ++Q ++TQ + R E L + L L+S++NPHFLFN LN Sbjct: 244 RLTGTFNQMKHAMAQQLTTQQALHREEVRNLALEKDLEHTRLEVLKSQVNPHFLFNTLNM 303 Query: 380 ISSSIRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 IS RL + T Q+I +L R+N+ K + I +++EL ++DYI ++Q RF ++ Sbjct: 304 ISCMARLEDAATTDQMIVHLGSLFRHNLRTKRQQ-ITLEEELDGLEDYIYLQQMRFDGRI 362 Query: 439 TVI--YDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 TV + +PS ++QP+VENA HG++ C+ G + + G + + V D Sbjct: 363 TVEKSIRVQPAA-VLVPSFMLQPVVENAYSHGLKSCEEGGRILLRAWMQGKVLVLTVADN 421 Query: 497 GHGIDPKVIE----RVEANEMPGNKIGLLNVHHRVKLLY-GEGLHI-RRLEPGTEIAFYI 550 G G+ P+ ++ ++ +E G IGL N+ R+ +LY G + I R + GT + F + Sbjct: 422 GKGMTPEELDAVQTKIAQSEQTGRSIGLGNISRRIGMLYPGGKMQIYSRADCGTVVRFEL 481 Query: 551 PNQRTPVASQATL 563 P + P + TL Sbjct: 482 PQTQQPEEKEETL 494 >UniRef50_C8NE17 Sensor histidine kinase n=2 Tax=Granulicatella RepID=C8NE17_9LACT Length = 563 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 70/236 (29%), Positives = 120/236 (50%), Gaps = 12/236 (5%) Query: 326 TSSLQEMAVGLSQIISTQLEVSRAEQLREMANK-AELRALQSKINPHFLFNALNAISSSI 384 Q +A +Q++ ++ + E+ +E + EL+AL S+INPHFL+N L I Sbjct: 330 AQEFQVLAASFNQMLEKIEKLMQDEKEQEALTRVYELKALTSQINPHFLYNTLETIIWMA 389 Query: 385 R-LNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 + ++ LS Y R ++ +E + +++E+ ++ Y+ I++ R+GDKL D Sbjct: 390 EFQDHKKVVEITKALSNYFRLSLNA-GNELVTLQQEIEHVRQYLFIQKERYGDKLNYRID 448 Query: 444 IDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 EE+ IP ++IQPLVENAI HGI+ G + I++ + + I + D G G+ Sbjct: 449 FSEEIPPIMIPKIVIQPLVENAIYHGIKEIDRPGQIDITLLKIDEWIEICIADNGVGMSG 508 Query: 503 KVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRT 555 K E + IG+ NV R+KL +GE + + T++ IP +R Sbjct: 509 K-----ETSSKQLGGIGIKNVTERLKLFFGEAFTMTIDSKSNEYTKVYLRIPIKRQ 559 >UniRef50_A8RNT0 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RNT0_9CLOT Length = 565 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 76/257 (29%), Positives = 136/257 (52%), Gaps = 16/257 (6%) Query: 307 EKGVVTGTLKIYYCHA-HQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQ 365 EKG + +L+I +I S M + +++ E+++ L A ++ L+ Sbjct: 316 EKGDLDVSLEITSGDEFERIGHSFNTMIGSIRHLLARHQELAKENML------ATVQILE 369 Query: 366 SKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKD 425 S+ NPHFLFN L +I I+ P A +++ +LSR LRY+I+ + + +K+E+ I Sbjct: 370 SQFNPHFLFNTLESIRYMIKFGPGEAEKMLVSLSRMLRYSIQ-NGKDVVTVKEEMDFISR 428 Query: 426 YIAIEQARFGDKLTVIYDIDE-EVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAE 484 Y+ + R+GD+L D++E N IP + +QP+VEN+I +G + + IS Sbjct: 429 YLQVMLYRYGDRLRYSIDLEEGSRNASIPRMALQPIVENSIKYGFGEDRDCLEIRISTRI 488 Query: 485 CGNRVRIAVRDTGHGIDPKVIERVEANEMPG----NKIGLLNVHHRVKLLYGEGLHI--- 537 + + + D G GI +++E+++AN G + IG+ NVH R++L+YG G + Sbjct: 489 QNEVLSVIISDDGVGISTELLEKLKANLDQGQNQTDHIGIYNVHKRIRLVYGSGYGVGID 548 Query: 538 RRLEPGTEIAFYIPNQR 554 +E GT + +P + Sbjct: 549 SEMEKGTVVTLRVPCEE 565 >UniRef50_C5RJU0 Cache sensor signal transduction histidine kinase n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJU0_CLOCL Length = 588 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 72/257 (28%), Positives = 129/257 (50%), Gaps = 20/257 (7%) Query: 308 KGVVTGTLKIYYCHAHQ-----ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELR 362 K V G I + ++ + M + ++S + +E K+EL Sbjct: 335 KKVEEGNFDIQIDAKGEDEVVKLSQAFNLMLSKVRSLMSQIV------IEQESKRKSELD 388 Query: 363 ALQSKINPHFLFNALNAISSSIRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELY 421 ALQS+INPHFL+N L++I ++ +L++ R +I K I +++E+ Sbjct: 389 ALQSQINPHFLYNTLDSIVWMAENGKSQDVITMVTSLAKLFRISIS-KGRNIISVEQEIE 447 Query: 422 QIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTI 480 ++Y+ I++ RF +K T + D E ++ L++QPL+EN+I HGI+ + +G + I Sbjct: 448 HARNYLIIQKIRFKNKFTYDIETDPETMHLKTTKLILQPLIENSIYHGIEYMQDQGYIKI 507 Query: 481 SVAECGNRVRIAVRDTGHGIDPKVIERV---EANEMPGNKIGLLNVHHRVKLLYGEGLHI 537 S + ++ + D G GI+P+ + + E G+ IG+ NVH R++L YG+ + Sbjct: 508 STSIVDGKLLFEISDNGLGIEPEKLPHLLEYETEPKAGSGIGVKNVHERIQLTYGKEYGL 567 Query: 538 R---RLEPGTEIAFYIP 551 LE GT I ++P Sbjct: 568 EIKSELEEGTNIKIWLP 584 >UniRef50_UPI0001788F16 integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788F16 Length = 580 Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 76/240 (31%), Positives = 122/240 (50%), Gaps = 11/240 (4%) Query: 324 QITSSLQEMAVGLSQIISTQLEVS-RAEQLREMANKAELRALQSKINPHFLFNALNAISS 382 Q+T M + L +I+ + + L A+L ALQS+INPHFLFNAL I Sbjct: 341 QLTGEFNRMTLQLKSLINDVYVADIQKKNLELQRRHAQLNALQSQINPHFLFNALETIRM 400 Query: 383 -SIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVI 441 S+ + D ++I N+++ R ++ K D + +K+E+ I ++ I++ RFGDK+ Sbjct: 401 RSLMKDEDETARIIHNMAKIFRNSLVWKKD-MVTLKEEVEFIHCFLEIQRYRFGDKIDYS 459 Query: 442 YDID-EEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGI 500 EE + IP + I VENA +HGI+P K G + + V G + ++D G G+ Sbjct: 460 VHAPAEEGHLQIPKMAIVTFVENASIHGIEPLKHGGRIEVRVVREGQSLFCTIQDNGAGM 519 Query: 501 DPKVIERV----EANEMPGNKIGLLNVHHRVKLLYGEGLHIR---RLEPGTEIAFYIPNQ 553 + +ER+ E + G +IG+ NV +R+KL YG GT + IP + Sbjct: 520 PAEKVERIYRYLETEDEMGERIGIQNVIYRLKLYYGSRFRFEIDSSPGQGTRVKLSIPIE 579 >UniRef50_UPI0001789617 integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789617 Length = 574 Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 69/268 (25%), Positives = 133/268 (49%), Gaps = 25/268 (9%) Query: 296 EIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREM 355 + + +P+ V + + M+ + ++I + E + Sbjct: 318 RVKQGIFVPIPSHNVAEDETDL-------LIDGFNRMSTQIQELI------GQVETEQAR 364 Query: 356 ANKAELRALQSKINPHFLFNALNAISSSIRLNPDT-ARQLIFNLSRYLRYNIELKDDEQI 414 +AEL+AL ++INPHF++N+L +I+S L + +++ +L + LR +I + E I Sbjct: 365 KKEAELQALVAQINPHFIYNSLESINSMAVLQGNKDISKMVISLGKLLRISIS-EHHELI 423 Query: 415 DIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIP-SLLIQPLVENAIVHGIQPCK 473 + EL ++ Y+ I++ RF +K ++ E+ + L++QP+VENA+ HGI+P + Sbjct: 424 PLSMELEHVQHYMRIQKFRFEEKFDYGIELPNELRHYVTQKLIVQPIVENALYHGIEPME 483 Query: 474 GKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV------EANEMPGNKIGLLNVHHRV 527 G+++I V+E G + I V D G G DP+ + ++ + + N +GL NVH R+ Sbjct: 484 ESGLISIKVSENGEDIVIDVEDNGPGFDPETLMKLWNSDPGQLKKYRENGVGLKNVHERL 543 Query: 528 KLLYGEGLHI---RRLEPGTEIAFYIPN 552 ++ +G + G+ I IP Sbjct: 544 RIRFGSRYGLMICSSPGYGSLIRIRIPK 571 >UniRef50_A4IPA9 Two-component sensor histidine kinase n=5 Tax=Bacillales RepID=A4IPA9_GEOTN Length = 595 Score = 247 bits (632), Expect = 8e-64, Method: Composition-based stats. Identities = 74/269 (27%), Positives = 120/269 (44%), Gaps = 30/269 (11%) Query: 306 WEKGVVTGTLKIYYCHAHQ-----ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAE 360 + K G L + Y + S M + + IS AE +AE Sbjct: 328 FMKKAQAGDLTVRYHDERMDEIGILGRSFNHMLDQMQRFISL------AEWQERQRWEAE 381 Query: 361 LRALQSKINPHFLFNALNAISSSIRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKE 419 LR +Q++I PHFL+N L+ I R D +++ L++ R + K I +E Sbjct: 382 LRDMQAQIKPHFLYNTLDTIQWMARKKGADDVAEVVGALAKLFRIGLS-KGRNMILFAEE 440 Query: 420 LYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVV 478 + IK Y+ I++ R+ DKL +DI E + + LL+QP+VENAI HGI+ +G G + Sbjct: 441 IEHIKSYLHIQKVRYKDKLNYTFDIPEHLQQFYVLKLLLQPIVENAIYHGIKQRRGPGHI 500 Query: 479 TISVAECGNRVRIAVRDTGHGIDPKVIERVE--------ANEMPG-----NKIGLLNVHH 525 +I E + I V+D G G+ + +E + A + G G++NV Sbjct: 501 SIQAEERDGTMYIRVKDDGIGMSRERLEELRKSLTIDFTAGDQEGKMRNIKGYGMVNVQA 560 Query: 526 RVKLLYGEGLHI---RRLEPGTEIAFYIP 551 R++L +G + GT + P Sbjct: 561 RLQLTFGPSYRLYIDSEEGKGTTVMIVHP 589 >UniRef50_A9KIC4 Multi-sensor signal transduction histidine kinase n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIC4_CLOPH Length = 585 Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats. Identities = 60/237 (25%), Positives = 127/237 (53%), Gaps = 10/237 (4%) Query: 326 TSSLQEMAVGLSQIISTQLEVSRAE-QLREMANKAELRALQSKINPHFLFNALNAISSSI 384 + + + + +I T E+ A + +E K+ELRALQ++INPHFL+N L++I Sbjct: 347 SDEIANLGKSYNIMIQTVDELMEARVKDQEQKRKSELRALQAQINPHFLYNTLDSIVWMA 406 Query: 385 RLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 + + +L++ R +I + +E +++E+ +++Y+ I++ R+ ++L Sbjct: 407 EEGKNQEVVTMTASLAKLFRQSISNEAEEF-TLRQEVDYVRNYLVIQKMRYKEQLNYDIQ 465 Query: 444 IDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 + E +N + L++QPLVENA+ HG++ G G + + E + V + V D G G+D Sbjct: 466 VPESILNYYVIKLILQPLVENALYHGVKYKDGVGTIFVDGYETESTVVLQVIDDGIGMDE 525 Query: 503 KVIERV---EANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQ 553 + + + + +++ + N+H+R++L YG+ + + GT++ +P + Sbjct: 526 EELSHLFEKRKSTHKTSRVAIRNIHNRIQLHYGKEFGLSFESKKGYGTKVMITLPKK 582 >UniRef50_Q9KB25 BH2110 protein n=2 Tax=Bacillus RepID=Q9KB25_BACHD Length = 585 Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats. Identities = 74/247 (29%), Positives = 135/247 (54%), Gaps = 13/247 (5%) Query: 324 QITSSLQEMAVGLSQIISTQLEVS-RAEQLREMANKAELRALQSKINPHFLFNALNAISS 382 ++T+ +M+ ++++I+ + + L+ +A+L ALQS+INPHFLFNAL I Sbjct: 341 ELTNEFNKMSQTINRLINEVYASNIEKKDLQLREKQAQLSALQSQINPHFLFNALETIRM 400 Query: 383 --SIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTV 440 I+ +TA ++I N+++ R ++ + + ++ EL I ++ I++ RFGDK+ Sbjct: 401 RSMIKGEKETA-KIIQNMAKIFRNSLTW-GKDWVTVRDELCLIICFLEIQKYRFGDKMEY 458 Query: 441 IYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHG 499 DIDEE + IP+++ P VENA +HGI+ K KG++ I V + + + D G G Sbjct: 459 ELDIDEEAYDYIIPNMVFLPFVENASIHGIESVKEKGIIQIRVEKNDGEIVYEISDNGAG 518 Query: 500 IDPKVI----ERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPN 552 +D + + E ++ E G +G+ NV++R+KL Y R GT + +P Sbjct: 519 MDEEKLASLIETLKNEENMGENVGIKNVYYRLKLHYKNHFDFSINSRPGQGTTVQIKLPA 578 Query: 553 QRTPVAS 559 ++ ++ Sbjct: 579 EKNNISK 585 >UniRef50_C5RJF6 Histidine kinase n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJF6_CLOCL Length = 585 Score = 247 bits (631), Expect = 9e-64, Method: Composition-based stats. Identities = 82/261 (31%), Positives = 138/261 (52%), Gaps = 16/261 (6%) Query: 308 KGVVTGTLKIYYCHAH-----QITSSLQEMAVGLSQIISTQL-EVSRAEQLREMANKAEL 361 VV+G +I ++ L +M + +I+ E + EQL E Sbjct: 326 HKVVSGDFEIIKTLEGDDEIAELYDDLYKMIDSIQLLINQVYVEKIQKEQLASKQKDVEF 385 Query: 362 RALQSKINPHFLFNALNAISSSIRLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKEL 420 + L S+INPHFL+N L I N +++ L++ +R N+E+ D + ++ E+ Sbjct: 386 KMLASQINPHFLYNTLETIRMKAYCNEQYEIAEIVKILAKIMRRNLEIN-DNLVSLESEI 444 Query: 421 YQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVT 479 IK+Y+ I++ RFGD++T +I+ ++ + LL QP+VENA VHG + +G G + Sbjct: 445 TMIKNYLKIQKFRFGDRITYDINIECNIDDYYVLPLLFQPVVENAFVHGFEHKQGIGEIK 504 Query: 480 ISVAECGNRVRIAVRDTGHGIDPKVIERVEAN----EMPGNKIGLLNVHHRVKLLYGEGL 535 I +++ NR+ ++RD G GI P+ +E + A+ G IGL NV+HR+K+ YG+ Sbjct: 505 IIISKDENRLIFSIRDNGVGISPETLENLRASISNINYKGKSIGLNNVNHRIKIYYGDEY 564 Query: 536 HIRR---LEPGTEIAFYIPNQ 553 + LE GTE+ Y+P Sbjct: 565 GVEIFSGLEVGTEVKIYLPIN 585 >UniRef50_Q5WIY4 Two-component sensor histidine kinase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WIY4_BACSK Length = 599 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 88/263 (33%), Positives = 138/263 (52%), Gaps = 22/263 (8%) Query: 305 LWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQ-LREMANKAELRA 363 L K + GT +I QI+ L +M L++ I+ LE + + L N+ + + Sbjct: 342 LTTKVALDGTDEI-----GQISLQLNKMIDDLNESIAQLLEANEQKTALERKQNEMKFKM 396 Query: 364 LQSKINPHFLFNALNAISSSIRLNPDT-ARQLIFNLSRYLRYNIELKDDEQIDIKKELYQ 422 + S++NPHFLFN L AI ++ +T + + L + LR ++E+ I +K+EL Sbjct: 397 MASQMNPHFLFNTLEAIRMRAHMSNETDIAKAVKRLGQLLRKSLEV-GSSMIPLKEELEM 455 Query: 423 IKDYIAIEQARFGDKLTVIYD----IDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVV 478 ++ Y+ I+ R+G++LT D ID N + L IQPLVENA+ HG++ + G V Sbjct: 456 VRSYLEIQSFRYGERLTYDMDDAVTID---NVAVIPLTIQPLVENAVSHGLEAKEADGYV 512 Query: 479 TISVAECGNRVRIAVRDTGHGIDPKVIERVEAN-----EMPGNKIGLLNVHHRVKLLYG- 532 I + + + I V D G G+ P+ + V+A E P N+IGL NVH R+K YG Sbjct: 513 NIRIKQAEDGTWIEVSDNGIGMGPQRQQEVQAMIEDPLEKPENRIGLRNVHQRLKQTYGT 572 Query: 533 EGLHIRRL-EPGTEIAFYIPNQR 554 +GL I GT + F IP + Sbjct: 573 DGLLISSSQGEGTTVRFLIPKEE 595 >UniRef50_B8I617 Histidine kinase n=2 Tax=Clostridium RepID=B8I617_CLOCE Length = 612 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 79/271 (29%), Positives = 135/271 (49%), Gaps = 19/271 (7%) Query: 296 EIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVS-RAEQLRE 354 +IH L ++G+ +I ++ L +M + +++ E + ++L Sbjct: 330 QIHRAASGDLDISPGISGSDEI-----AELYKDLIKMIGDMKKLLQENYEHKLQQQKLLT 384 Query: 355 MANKAELRALQSKINPHFLFNALNAISSSI-RLNPDTARQLIFNLSRYLRYNIELKDDEQ 413 N+A+ + L S+INPHFLFN L +I +I L + +R +EL D+ Q Sbjct: 385 KQNEAQFKMLASQINPHFLFNTLESIRMKAFVCGQREIATVIKLLGKSMRSLLELDDNPQ 444 Query: 414 IDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN---CCIPSLLIQPLVENAIVHGIQ 470 +K EL +++Y+ I++ RF +++ D+ + ++ + LLIQP+VENA VHG++ Sbjct: 445 -PLKSELDFVRNYLEIQKFRFAERVDYTIDVQDGIDEKILKVLPLLIQPIVENAFVHGLE 503 Query: 471 PCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV-----EANEMPGNKIGLLNVHH 525 +G G + I V + + V+D G G++ + +E V E+ G IGL NV+ Sbjct: 504 QKEGHGRIDIIVNRYNENIMVIVKDDGLGMEAEKLEEVHCKIKESGGKTGKSIGLSNVNQ 563 Query: 526 RVKLLYGEGLHIR---RLEPGTEIAFYIPNQ 553 R+KL YGE IR GT + P Q Sbjct: 564 RIKLYYGESYGIRVDSSPGTGTTVWISFPEQ 594 >UniRef50_Q1YRG0 Sensor histidine kinase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRG0_9GAMM Length = 386 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 83/271 (30%), Positives = 140/271 (51%), Gaps = 20/271 (7%) Query: 308 KGVVTGTLKIYYCHA--------HQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKA 359 G + G++ I+ C A +Q+ S E + + + E + + A +A Sbjct: 121 GGWLFGSIMIFLCWAAFYHGIKYYQLLQSEHEALLHFAA--ENKEEQLKRSRAETFAQEA 178 Query: 360 ELRALQSKINPHFLFNALNAISSSI-RLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKK 418 +L+ L+ ++NPHFLFN LNAIS+ + + A +I LS +LRY++E +++ +++ Sbjct: 179 QLKMLRYQLNPHFLFNTLNAISALVVSRSSANANTMIMQLSNFLRYSLENDPIKRVTLEE 238 Query: 419 ELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGV 477 E+ ++ Y+ IE+ RF D+L + +D+D + IPSLL+QPLVENAI + I P + G Sbjct: 239 EVRALRLYLDIEKTRFADRLELEFDVDPAAHEIKIPSLLLQPLVENAIKYAIAPAEKGGK 298 Query: 478 VTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI 537 +++ G + I V+DTG GI+ + + G IGL N R+ YG+ Sbjct: 299 ISVFSKLDGEHLVIEVKDTGAGIEGD-----HHSMVSGPGIGLKNTVDRLSAFYGDNYVF 353 Query: 538 RRLEP---GTEIAFYIPNQRTPVASQATLLL 565 P G I +P ++ S A L+L Sbjct: 354 ELRGPNASGMTIYIRLPLEKQTAESNAELVL 384 >UniRef50_D0MJT6 Signal transduction histidine kinase, LytS n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MJT6_RHOM4 Length = 389 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 73/246 (29%), Positives = 126/246 (51%), Gaps = 21/246 (8%) Query: 323 HQITSSLQEMAVGLSQ--IISTQLEVSRAEQLREMA-------NKAELRALQSKINPHFL 373 + + + +A G ++ + Q A QLR A +A L+AL+ ++NPHFL Sbjct: 141 NDLVTFFAVLAAGFARDYFLRYQQRQQEAAQLRAQAADLQARLTEARLQALRMQLNPHFL 200 Query: 374 FNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQAR 433 FN L+AIS+ + +P R +I LS LRY ++ +++ + +EL ++ Y+ I+Q R Sbjct: 201 FNTLHAISALVERDPKGVRHMIARLSELLRYTLDESGAQEVPLAQELRFMEGYLDIQQIR 260 Query: 434 FGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIA 492 F +L V +ID + + +P+L++QP+VENAI HG+ + G +T+ G+++ + Sbjct: 261 FQGRLEVKQEIDPDVLEALVPNLILQPIVENAIKHGVSRLETTGRITLRAWREGDQLWLC 320 Query: 493 VRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRR---LEPGTEIAFY 549 VRD G G + N +GL N R++ LYG+ + E G E+ Sbjct: 321 VRDNGPG--------LSGNGQGQEGLGLRNTRARLEGLYGDAYRMELRQPPEGGMEVCIS 372 Query: 550 IPNQRT 555 +P Sbjct: 373 LPYHTA 378 >UniRef50_C6IY77 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IY77_9BACL Length = 600 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 83/273 (30%), Positives = 130/273 (47%), Gaps = 25/273 (9%) Query: 297 IHSMLVIPLWE-----KGVVTGTLKI-----YYCHAHQITSSLQEMAVGLSQIISTQLEV 346 I L PL + K V G L + Y + S M + +++ E Sbjct: 317 ISYALTKPLKQTVQLMKQVQRGKLDVRVRVKYNDEIGLLGSHFNRMISRIRELLDEVAET 376 Query: 347 SRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPD-TARQLIFNLSRYLRYN 405 +++Q KA++ ALQ++INPHF++N L +I LN D +L + L LRY+ Sbjct: 377 EKSKQ------KADMLALQNQINPHFIYNTLESIRMLAELNDDDQVAELTYLLGLLLRYS 430 Query: 406 IELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCC-IPSLLIQPLVENA 464 I DE + I++E+ +++Y+ + Q RF DK ++I E I L+ QP+VENA Sbjct: 431 ITRSADEIVTIRQEIDHVRNYLLLLQIRFPDKFNFRFEIPESFYALPIIKLVFQPIVENA 490 Query: 465 IVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGN----KIGL 520 + HG++ +G G +TI G V D G G+ + + + + G IGL Sbjct: 491 VFHGLEKRQGSGTITIRAWSDGGDAVFTVHDDGVGMTEERLVTLNHSLTDGKTDKFGIGL 550 Query: 521 LNVHHRVKLLYGEGLHI---RRLEPGTEIAFYI 550 NVH R++L YG G + RL GT + I Sbjct: 551 RNVHERIRLHYGHGSRLTVSSRLGEGTTVTLRI 583 >UniRef50_C6IXH6 Histidine kinase internal region n=2 Tax=Bacillales RepID=C6IXH6_9BACL Length = 598 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 82/240 (34%), Positives = 130/240 (54%), Gaps = 11/240 (4%) Query: 325 ITSSLQEMAVGLSQIISTQLEVS-RAEQLREMANKAELRALQSKINPHFLFNALNAISSS 383 + + M ++ +I+ ++ + + L +AEL LQS++NPHFLFN LNAI Sbjct: 354 LIRNFNMMTARINALINNVYKLEIQQKSLEAERVRAELNFLQSQMNPHFLFNTLNAILVV 413 Query: 384 I-RLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIY 442 + N +I NLS+ LR + K+D + +++E+ I Y+ IE+ RF DK ++ Sbjct: 414 CTKKNYSDVTDIIKNLSKLLRRLLRWKED-LVTLEEEIRFIDMYLKIEKFRFRDKFEYVF 472 Query: 443 DIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGID 501 DI+E ++ IP + IQPLVENA HGIQ +G G+VT+ R+RI + D G GI Sbjct: 473 DIEEAALHYTIPKMSIQPLVENACKHGIQAVQGNGLVTVKARVEDGRLRIVISDNGKGIK 532 Query: 502 PKVIER----VEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQR 554 P+ + V + GN IG+ NV+ R +L Y + + + GT++ IP +R Sbjct: 533 PEQLREMLLTVRSENTSGNSIGIRNVYRRFELYYNDQVRFNIDSKPGQGTKVCIEIPVKR 592 >UniRef50_C6IWB4 Histidine kinase internal region n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWB4_9BACL Length = 601 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 78/243 (32%), Positives = 135/243 (55%), Gaps = 14/243 (5%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQ-LREMANKAELRALQSKINPHFLFNALNAISS 382 Q++ + LSQ++ E +R ++ L + ++ +L+ L S+INPHFLFN L +I Sbjct: 350 QLSQRFNALVGRLSQLMKEMDEANRQKRKLEQRQSEIKLKMLASQINPHFLFNTLESIRM 409 Query: 383 SIRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVI 441 L + I+ LS +R +E+ D+ +I + +EL +K Y+ +++ R+ D+L Sbjct: 410 EAHLRGEEEIAHAIWQLSALIRNGLEV-DNGKISLSRELDMVKCYLELQKFRYEDRLNYK 468 Query: 442 YDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKG-VVTISVA-ECGNRVRIAVRDTGH 498 +++ + IP L+IQPLVEN+I+HG++ + + I + RV + + D G Sbjct: 469 LEVEPGIEEIEIPPLIIQPLVENSILHGLEQKEEGATTILIRAYFDDNGRVCVNIFDDGA 528 Query: 499 GIDPKVIERV-----EANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYI 550 GI PK ++ + E E G +IGL NVH R+KL+YG+G + + GT+I+F I Sbjct: 529 GIAPKRLQELNRMLNEPEEEAGQRIGLRNVHDRLKLIYGDGAGLTIGSQEGEGTQISFCI 588 Query: 551 PNQ 553 P + Sbjct: 589 PKE 591 >UniRef50_B1HZJ7 Sensor protein n=3 Tax=Bacillaceae RepID=B1HZJ7_LYSSC Length = 1015 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 78/227 (34%), Positives = 131/227 (57%), Gaps = 4/227 (1%) Query: 338 QIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFN 397 ++ S + + ++ + ++ E LQ++I PHFLFN LNAI + ++ + +L+ Sbjct: 790 ELRSRVAALIKVKRSIQERHRMEAAWLQAQIEPHFLFNTLNAILTLSEMDSERTSRLVEA 849 Query: 398 LSRYLRYNIELKDDE-QIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLL 456 LS +LR + ++ E + ++ EL I+ Y+ I+Q RFGD++ V +D++ + IPSL Sbjct: 850 LSDFLRESYNFQNVEALVPLENELTLIQAYLYIQQERFGDRIQVKWDLEASTDVLIPSLT 909 Query: 457 IQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIER-VEANEMPG 515 IQPLVENA+ HGI G + I + E +++ I V D G GID + + + ++ + P Sbjct: 910 IQPLVENALQHGILKRTEGGTIHIRIYESESQLEITVSDNGVGIDEQRLSQLLQTKQQPS 969 Query: 516 NKIGLLNVHHRVKLLYGEGLHIRR-LEPGTEIAFYIPNQRTPVASQA 561 IGL+N H R++ YG+GLHI L GT ++F + + PV A Sbjct: 970 GSIGLMNTHLRLQQHYGQGLHITSKLHEGTAVSFVV-LVKKPVKQNA 1015 Score = 55.9 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 15/112 (13%) Query: 460 LVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGN--- 516 LV NA+ +G +TIS I + DTG G+D + + R+ G Sbjct: 543 LVHNAVKF-----TNEGSITISSYTRNGMANIVITDTGIGVDDETMRRIFERYEQGTISK 597 Query: 517 -----KIGL-LNVHHRVKLLYGEGLHIRRL-EPGTEIAFYIPNQRTPVASQA 561 GL LN+ R+ L+G L + + G+ F +P + Sbjct: 598 TMVEGGFGLGLNICKRLIELHGGTLKAQSIVGQGSTFTFTLPLAVESNVQEP 649 >UniRef50_Q2BFM1 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BFM1_9BACI Length = 588 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 77/244 (31%), Positives = 130/244 (53%), Gaps = 18/244 (7%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSS 383 ++ S +M ++ +IS + E +A+LRAL+++INPHFL+N L+AI+ Sbjct: 348 RVGDSFNKMMNKINNLISDIYQKDINE------KEAQLRALRAQINPHFLYNTLDAINWM 401 Query: 384 IRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIY 442 + + D ++ LSR L+ +I + E I +++E I DY+ I++ RF DK+ Sbjct: 402 AQFDKTDEVSKMTIALSRLLKSSIS-NNKEFIRLEEEAKYIDDYMTIQKIRFQDKIHYSM 460 Query: 443 DIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGID 501 IDE NC +P L++QP+VENA++HG++ G + I + + I + D G G+D Sbjct: 461 QIDEAAKNCLVPKLILQPIVENAMIHGLEKKLENGYLLIKGYVKNDLLHIQIIDNGVGMD 520 Query: 502 PKVIERV------EANEMPGNKIGLLNVHHRVKLLYGE--GLHIRRLEP-GTEIAFYIPN 552 + + + +E G G+LNV +R+KLL+G GL+I E G+ +P Sbjct: 521 ERTMSALLKGVYVNRDENKGTGNGILNVQNRIKLLFGREYGLNIDSNENVGSVFELTLPV 580 Query: 553 QRTP 556 R Sbjct: 581 HREG 584 >UniRef50_A9AWB2 Histidine kinase internal region n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AWB2_HERA2 Length = 516 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 88/298 (29%), Positives = 137/298 (45%), Gaps = 36/298 (12%) Query: 296 EIHSMLVIPLWEKGVVTGTLK-------IYYCHAHQITS---SLQEMAVGLSQIISTQLE 345 I + IP+ + VT T+ + +A +IT S M + +++ +LE Sbjct: 224 RISKGIYIPIKKLHDVTTTIARQDLEGLVMADNADEITELGLSFNIMVGKIKELLDAKLE 283 Query: 346 VSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIR-LNPDTARQLIFNLSRYLRY 404 KAELR LQ++INPHFL+N L+AI L+ LSR+ R Sbjct: 284 EHEN------LKKAELRVLQAQINPHFLYNTLDAIIWMAEAKRTAQIIDLVSALSRFFRI 337 Query: 405 NIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCC-IPSLLIQPLVEN 463 + K + I + E+ I+ Y+AI++ R+ D L DI E+ + L +QPLVEN Sbjct: 338 TLS-KGRDWISVPDEIAHIESYLAIQKIRYRDILDYQIDIPEDTQSTEMLKLTLQPLVEN 396 Query: 464 AIVHGIQPCKGKGVVTISV-AECGNRVRIAVRDTGHGIDPKVIERVEANEMPGN------ 516 A+ HGI+ + G + + G+R+RI V D G G+ + +++V GN Sbjct: 397 ALYHGIKNKRSGGTIVVRGRWLDGDRLRIEVEDNGIGMTQERLQQVRTLLEAGNLWVTGV 456 Query: 517 ------KIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRTPVASQATLLL 565 G+ NV+ R+KL YG + GT +A IP R + +Q L L Sbjct: 457 MPIVEDGYGISNVNQRIKLYYGSDYGLSIESEHGRGTCVALIIPRYR-GITTQPPLAL 513 >UniRef50_UPI00016C0712 two-component sensor histidine kinase n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0712 Length = 562 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 79/235 (33%), Positives = 140/235 (59%), Gaps = 17/235 (7%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 + + +M + Q+I ++ + + AE+R+LQ +INPHFL+N L I+ Sbjct: 327 LNHTFNQMVWDMKQLIESEY------XQKVLKQNAEIRSLQMQINPHFLYNTLETINWLS 380 Query: 385 RLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 R+ D + +L R +RY++ K + + IK+E+ + DY+ I++ R+GDK++VI++ Sbjct: 381 RMRGMDDVGDITASLGRLMRYSLSKK--KYVQIKEEIQNLIDYVEIQEVRYGDKVSVIFE 438 Query: 444 IDEEVNC-CIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 +DEE++ IP LLIQP+VENAIVHGI+ ++ + V + G + I + D G GI Sbjct: 439 VDEELDFFYIPKLLIQPMVENAIVHGIEGKVEPSMIWVRVKKVGQXIDIEIEDDGVGIKS 498 Query: 503 KVIERVEANEMPGN----KIGLLNVHHRVKLLYGE--GLHIRRLE-PGTEIAFYI 550 ++++++ AN+ IG++NV+ R+++LYG+ G+ I E GT+I +I Sbjct: 499 EILDKILANKDTKTAGHSSIGMMNVNRRIQMLYGKXYGMQIESTEGKGTKIILHI 553 >UniRef50_C9L4P8 Putative two-component sensor histidine kinase n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L4P8_RUMHA Length = 620 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 76/241 (31%), Positives = 129/241 (53%), Gaps = 18/241 (7%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSS 383 +I + M+ + Q++ +E R E++ LQ++INPHFL+N L++I Sbjct: 386 EIGKGINHMSGKIEQLLKKNVEDERE------KKNLEIKMLQAQINPHFLYNTLDSIRWI 439 Query: 384 IRLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIY 442 + + + +++ LS L+ N+ +E++ +++EL ++DYI IE+ R+ + V Sbjct: 440 AVIQKNASIVKMVTALSSLLK-NMAKGFNEKVTLREELNFLQDYIIIEKMRYMEMFDVEI 498 Query: 443 DIDEE--VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGI 500 ++EE N I L +QPLVENAI GI+P G+++I V N + I+VRD G GI Sbjct: 499 HVEEESLYNARIVKLTLQPLVENAIFSGIEPMGENGIISIHVKALENTLCISVRDNGVGI 558 Query: 501 DPKVIERVEANEMPG-----NKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPN 552 + IE++ + + IGL NV R+KL+YGE + ++ TEI IP Sbjct: 559 PEEKIEKILKGKEKSKNDTMSGIGLPNVDQRIKLVYGEEYGLSIESKVGEYTEIQVRIPI 618 Query: 553 Q 553 + Sbjct: 619 E 619 >UniRef50_A9U7N0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U7N0_PHYPA Length = 374 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 77/209 (36%), Positives = 124/209 (59%), Gaps = 6/209 (2%) Query: 332 MAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTA 391 MA GL ++ STQLE++ AE + AE++ALQ++++PHFLFNA+N IS+ R +PD A Sbjct: 1 MAEGLGRLFSTQLELAEAEMQSRLLKDAEVKALQAQVHPHFLFNAINTISALCRTDPDKA 60 Query: 392 RQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NC 450 R+L+ L + R N++ I + +EL ++ Y+ +E+ARF DK + +DI+ E+ + Sbjct: 61 RELLIQLGVFFRSNLQGARQILIPLSQELRHVEAYLTLEKARFPDKFEMTFDIEPELADL 120 Query: 451 CIPSLLIQPLVENAIVHGIQPC--KGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV 508 IP +QPLVENA+ H + KG V I+ ++ G+ V I D G GI +++E++ Sbjct: 121 EIPPFTLQPLVENAVRHAFHGLGPQHKGSVCIAASQKGHEVMIVTADNGKGIPAELLEQL 180 Query: 509 EA---NEMPGNKIGLLNVHHRVKLLYGEG 534 + G L N+ R+ +YG G Sbjct: 181 GEQAVHSEDGTGTALHNIRKRIAEIYGRG 209 >UniRef50_B1R1H8 Two-component sensor histidine kinase YesM n=2 Tax=Clostridium butyricum RepID=B1R1H8_CLOBU Length = 597 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 75/263 (28%), Positives = 130/263 (49%), Gaps = 14/263 (5%) Query: 303 IPLWEKGVVTGTLKIYYCHA-HQITSSLQEMAVGLSQIISTQLEVS-RAEQLREMANKAE 360 + G + + KIY Q+ L++M + +I + E+L+ +AE Sbjct: 332 MRRVVNGDLYVSDKIYGNDEIGQLHIDLKKMVESIRNLIDRVYKQEVNEEKLKASQREAE 391 Query: 361 LRALQSKINPHFLFNALNAISSSIRLNPDT-ARQLIFNLSRYLRYNIELKDDEQIDIKKE 419 + L ++INPHFL+N L I L D ++ L + +R N+E+ + + E Sbjct: 392 FKMLSNQINPHFLYNTLETIRMKALLKGDKETSDIVKKLGKIMRRNLEVSGKP-VTLDSE 450 Query: 420 LYQIKDYIAIEQARFGDKLTVIYDIDEEVN---CCIPSLLIQPLVENAIVHGIQPCKGKG 476 + I++Y+ I+ RF + ID+E+N I LL+QP+VENA VHG++ K KG Sbjct: 451 VELIRNYLEIQSMRFEGMVKFEIIIDDEINAKEYMILPLLLQPVVENAFVHGLEEKKEKG 510 Query: 477 VVTISVAECGNRVRIAVRDTGHGIDPKVI----ERVEANEMPGNKIGLLNVHHRVKLLYG 532 + I++ +C N + I V D G GID + + + + + IG+ NV+ R+K+ YG Sbjct: 511 TILINIYKCNNTINICVEDNGVGIDEEKLIMLNKALHTKQDTSKSIGMRNVNQRIKIYYG 570 Query: 533 EGLHI---RRLEPGTEIAFYIPN 552 + + L+ GT + +P Sbjct: 571 KSYGVYIESVLKVGTRVIITLPY 593 >UniRef50_C5EQZ0 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQZ0_9FIRM Length = 572 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 68/234 (29%), Positives = 117/234 (50%), Gaps = 13/234 (5%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSS- 383 I S +M ++ ++ +Q+ EM AE+RAL+++INPHF++N L++I Sbjct: 345 IASQFNKMMKQINN------QMDEIKQVSEMKKDAEIRALEAQINPHFIYNTLDSIHWLA 398 Query: 384 IRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 I D +++ ++ LRY I +D + IK+E+ +K Y+ +++ RF D D Sbjct: 399 IENGEDEISEMLSEFAQILRYQISGSND-VVKIKEEMEYLKKYLFLQKIRFMDNFEYAID 457 Query: 444 IDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNR-VRIAVRDTGHGID 501 +E ++C I ++ QPL+ENAI+HG + G + I + + ++ D G G+ Sbjct: 458 CEEGILDCHIHKMIFQPLIENAIIHGYANIRHGGFLRIKIYHINESGICFSITDNGRGMS 517 Query: 502 PKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIR---RLEPGTEIAFYIPN 552 P+ + V IG+ NV R+KL YG+ + GT I IP Sbjct: 518 PEKVGEVFGEGGSTPSIGVSNVLARLKLYYGDSYRMEVHSEENRGTSIKITIPK 571 >UniRef50_C0C1J1 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C1J1_9CLOT Length = 601 Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 79/250 (31%), Positives = 114/250 (45%), Gaps = 27/250 (10%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSS 383 Q+T S +M Q+I Q +AEL ALQ++INPHFL+N L I Sbjct: 358 QLTLSFDKMVERTKQLIENVY------QSEIYQKEAELNALQAQINPHFLYNTLQTIDMM 411 Query: 384 IRLN-PDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIY 442 D LS+ RY+I + E + ++ E+ I++Y+ I++ RFG KL V Y Sbjct: 412 AEEEGADEISDACQALSKIFRYSIN-RGQEFVHVQDEIVHIENYMLIQKLRFGGKLEVRY 470 Query: 443 DIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGID 501 DI E I LLIQP+VENA+VHG++ K VTI V + + V D G GI Sbjct: 471 DIQNECRELYIVKLLIQPMVENAVVHGMENVLDKCYVTIRVYRKEDCLYAEVEDNGTGIA 530 Query: 502 PKVIERVEANEMPG---------------NKIGLLNVHHRVKLLYGEGLHI---RRLEPG 543 P + + IGL N + R+KL +G+ I G Sbjct: 531 PGQLMELNEKLARSAEQKMVHEVDYVKNHRSIGLENTNARIKLYFGQEYGITITSEEGTG 590 Query: 544 TEIAFYIPNQ 553 T++ +P + Sbjct: 591 TKVCIKLPVR 600 >UniRef50_Q1ILF7 Periplasmic sensor signal transduction histidine kinase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1ILF7_ACIBL Length = 388 Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 119/211 (56%), Gaps = 14/211 (6%) Query: 347 SRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNI 406 RA QL +AEL AL+++++PHFLFN LN+I+S + + A +I +LS LR + Sbjct: 154 KRAAQLEAQLTRAELEALRNQLHPHFLFNTLNSIASLMHEDVQGADDMIADLSYMLRAYL 213 Query: 407 ELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAI 465 ++++I +++EL ++ Y+ I++ RF D+L+ D+ E + N +P+LL+QP VENAI Sbjct: 214 RDTNEQEISLRQELDLLETYLRIQKRRFEDQLSYTIDVAETLYNAAVPTLLLQPFVENAI 273 Query: 466 VHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHH 525 +HGI P G VT+S + G + + V D G G P +E IG+ N Sbjct: 274 LHGIAPSCSPGHVTVSARQLGGHLMLTVFDDGVGFTPGEME----------GIGVSNSRS 323 Query: 526 RVKLLYGEGLHIRRL---EPGTEIAFYIPNQ 553 R+K LYGE + + GT + +P Q Sbjct: 324 RLKQLYGEDQKVELVSAPGQGTTVTVRLPFQ 354 >UniRef50_B9MP60 Signal transduction histidine kinase, LytS n=2 Tax=Clostridia RepID=B9MP60_ANATD Length = 600 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 80/243 (32%), Positives = 130/243 (53%), Gaps = 12/243 (4%) Query: 324 QITSSLQEMAVGLSQIISTQLEVS-RAEQLREMANKAELRALQSKINPHFLFNALNAISS 382 Q+ MA + +++ +++ R ++L +AE+ ALQS+INPHFLFN L I Sbjct: 349 QVIEEFNIMARKIKELLEKEIKYELRQKELALEKKQAEINALQSQINPHFLFNTLETIRM 408 Query: 383 SIRLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVI 441 L + I L++ L+ +I ++D I I++E+ I DY+ I++ RFG+KL Sbjct: 409 RSMLKKEFETANAIKLLAKLLKRSIRWEND-LITIEEEISAIYDYLEIQKYRFGEKLKFE 467 Query: 442 YDIDEEVNC-CIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGI 500 ++DE+V IP + IQPLVENA VHGI+ KG+G + + V + G+ + I V D G G+ Sbjct: 468 IEVDEDVKSTKIPKMTIQPLVENACVHGIENSKGEGRIVVKVLKEGDMIAIHVEDNGKGL 527 Query: 501 DPKVIERVEA-----NEMPGNKIGLLNVHHRVKLLYGEGLHIRRLE---PGTEIAFYIPN 552 + I + + + +GL NV R++L Y + L G ++ IPN Sbjct: 528 EDDKITELLRSVKGLSSDKVSSVGLKNVFRRLELFYNKDFSFEILRSQLGGLKVVIKIPN 587 Query: 553 QRT 555 +R Sbjct: 588 KRD 590 >UniRef50_B0NX84 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NX84_9CLOT Length = 488 Score = 244 bits (624), Expect = 6e-63, Method: Composition-based stats. Identities = 72/242 (29%), Positives = 128/242 (52%), Gaps = 18/242 (7%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSS- 383 +T++ + MA + ++I E + EQ K EL+ LQ +INPHFL+N L+ I Sbjct: 250 LTNNFEHMAQKVERLI----EDVKIEQQN--LRKKELQLLQEQINPHFLYNTLDTIMWLA 303 Query: 384 IRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 I D +++ LS + R ++ +D+ I I++EL +++Y+ I+Q R+GD + D Sbjct: 304 IDHQDDKVVEMVAALSGFFRTSLSHGEDK-ISIREELEHVENYLKIQQLRYGDIMEYSID 362 Query: 444 IDEEVNCC-IPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 + +E+ I + +QPLVENA+ HG++ + KG++ IS + N + + V D G G+ P Sbjct: 363 VPDEIKKNDIVKITLQPLVENALYHGLKKQREKGMIKISSVDDENNIFLIVEDNGVGMQP 422 Query: 503 KVIERVEANEMPG------NKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQ 553 + + ++ G+ NV+ R+KL YGE + + GT++ +P Sbjct: 423 EQVVQINKEMYEDIWVNRTTGFGIANVNRRIKLYYGEEYGLILESEPDIGTKVIVVVPKT 482 Query: 554 RT 555 R Sbjct: 483 RQ 484 >UniRef50_C6LHP8 Histidine kinase n=2 Tax=Lachnospiraceae RepID=C6LHP8_9FIRM Length = 482 Score = 244 bits (624), Expect = 6e-63, Method: Composition-based stats. Identities = 78/290 (26%), Positives = 129/290 (44%), Gaps = 22/290 (7%) Query: 281 GKIIIKNNDEAHRTPEIHSMLVIPLWEKG---VVTGTLKIYYCHAHQITSSLQEMAVGLS 337 G +++ H T I + + V L+ ++ +M + Sbjct: 200 GALVLGRKITRHLTSGIQQLRTVTKKAGHGDFTVRAGLEDSDEELAELGEGFNQMVERIG 259 Query: 338 QIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNP-DTARQLIF 396 ++ E R EQL EL+ LQ++INPHFL+N L+ I N + ++ Sbjct: 260 NLV----EDIRVEQLN--LRSMELKLLQAQINPHFLYNTLDTIVWLAEANQTEQVVMMVT 313 Query: 397 NLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSL 455 LS + R + K + I +++E I+ Y+ I+Q R+ D L DI EE++ I L Sbjct: 314 ALSDFFRTTLS-KGRDYITVQEEESHIRSYLKIQQFRYQDILDYEIDIPEEMHHYQILKL 372 Query: 456 LIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPG 515 +QPLVENA+ HGI+ +GKG + ++ R+ V+D G G+ + + +V+ Sbjct: 373 TLQPLVENALYHGIKNKRGKGRILVTGYLESGRMVFLVQDNGQGMTGERLAQVQREMNKN 432 Query: 516 -------NKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRT 555 + GL NV R+KL YG I GTE+ +P + Sbjct: 433 ETDTGDPSGFGLFNVVQRIKLNYGAQYGIWISSTFMEGTEVRVELPAIKN 482 >UniRef50_C5EE53 Histidine kinase internal region n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EE53_9FIRM Length = 599 Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats. Identities = 77/237 (32%), Positives = 131/237 (55%), Gaps = 12/237 (5%) Query: 326 TSSLQEMAVGLSQIISTQLE-VSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 +Q ++ +++++S + + + ++ +E +AEL +Q +INPHFL+N L ++ Sbjct: 362 AREIQILSDKINELLSRVRQLIEQVKEEQEKKREAELSLMQEQINPHFLYNTLYSVQQLC 421 Query: 385 RLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 L+ A ++ LS + R + + ++ I I E+ +K+Y+ I+ ++GDK + Sbjct: 422 ELDESKEASAMVLALSNFFRTGLS-RGEDVITIDTEINHVKNYLVIQHMKYGDKFEYEIE 480 Query: 444 IDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 I ++ +C I L +QPLVENA+ HGIQ GKG++TI+ G R+ VRDTG G+ Sbjct: 481 IAPDIRDCRILKLTLQPLVENALHHGIQNQAGKGMITITGKREGGRILFEVRDTGAGMAS 540 Query: 503 KVIERVEANEMPGNKI-----GLLNVHHRVKLLY-GE-GLHIRRLEP-GTEIAFYIP 551 + +E+V + GL NV+ R+ L Y GE GL I ++ GT I YIP Sbjct: 541 ERLEQVRKSMNQEEGYSQVSFGLRNVYSRLMLYYDGEAGLEIESVQGRGTVIKVYIP 597 >UniRef50_A9U6Q4 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U6Q4_PHYPA Length = 530 Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 76/268 (28%), Positives = 131/268 (48%), Gaps = 30/268 (11%) Query: 297 IHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMA 356 + S + L ++ T++I +++ S +M ++++I E + Sbjct: 1 MRSARLSGLKPTVQISSTIEI-----NELNHSYNQMVEHMNELIGLVYEK------EILQ 49 Query: 357 NKAELRALQSKINPHFLFNALNAISS-SIRLNPDTARQLIFNLSRYLRYNIEL-KDDEQI 414 ++ EL+ALQ++I+PHFLFN L A+ + + D + + ++ RY I +E + Sbjct: 50 SRTELKALQAQIHPHFLFNTLEALYWSLMEKDEDELAEYVVAMADLFRYTITGPGKEEWV 109 Query: 415 DIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCK 473 ++ EL I+ Y+ I + R GD+L+ + + +P LLIQPLVENAI+HGI+ Sbjct: 110 RLEDELEHIERYLLIMKMRLGDRLSWSISSPPALASVPMPKLLIQPLVENAILHGIEGRI 169 Query: 474 GKGVVTISVAECGN--RVRIAVRDTGHGIDPKVIERV-------EANEMPGNKIGLLNVH 524 G G V++ V+ + + + V D G GID + R+ G+ +G+ NV Sbjct: 170 GPGKVSVGVSLSADQMHLVVTVTDDGKGIDEDNLRRIVTALQTGMTPPFKGSGMGIFNVQ 229 Query: 525 HRVKLLYG------EGLHIRR-LEPGTE 545 R+KL YG GL I + GT Sbjct: 230 QRIKLYYGGDRPDESGLAIDSQIHRGTR 257 >UniRef50_C6CT14 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CT14_PAESJ Length = 596 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 71/273 (26%), Positives = 134/273 (49%), Gaps = 24/273 (8%) Query: 298 HSMLVIPLWEKGVVTGTLKIYYCHAHQ-----ITSSLQEMAVGLSQIISTQLEVSRAEQL 352 S+ + + V G L + + + + + M + ++IS + Sbjct: 328 RSLRQMTDLMRTVRGGNLDVSFDVKQKDEVGILGTEFNRMLRRMKELISEIYVI------ 381 Query: 353 REMANKAELRALQSKINPHFLFNALNAISSSIRLNPD-TARQLIFNLSRYLRYNIELKDD 411 + +A+L ALQS+INPHF++N L I + +N D ++ F L + LRY+I + Sbjct: 382 QSRKKEADLEALQSQINPHFIYNTLETIRMTAEINDDEEVAEMTFTLGKLLRYSIN-RGR 440 Query: 412 EQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQ 470 E +++++EL ++ Y+ + + RF ++ V +DI +E+ N + L QP+VENAI+HG++ Sbjct: 441 ETVELREELQHLERYLQLLRYRFSNRFVVAFDIPQELMNFPVMKLTFQPIVENAILHGME 500 Query: 471 PCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV-------EANEMPGNKIGLLNV 523 + + +S + +++D G G+D ++ + + +GL NV Sbjct: 501 GKPNEVTIRLSAELKEQLLIFSIKDEGAGMDGMTLDLLRQAMNGTRESASSKTGVGLRNV 560 Query: 524 HHRVKLLYGE--GLHIRR-LEPGTEIAFYIPNQ 553 + R+KL YGE GL I GT + +P + Sbjct: 561 NERIKLHYGETYGLEIESKWGEGTTVNLKLPRK 593 >UniRef50_UPI0001B9ED30 integral membrane sensor hybrid histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ED30 Length = 1051 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 67/199 (33%), Positives = 114/199 (57%), Gaps = 3/199 (1%) Query: 358 KAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKD-DEQIDI 416 + E LQ++I+PHFLFN LN+I + ++ D R L S YL+ + ++ D + + Sbjct: 848 RMEAAYLQAQIHPHFLFNTLNSIMALSEMDIDRMRSLGEAFSSYLQISFHYRNQDRLVPL 907 Query: 417 KKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKG 476 ++EL I+ Y+ +E R+G++L V +++D ++N IP L IQPL+ENA+ HGI G Sbjct: 908 QQELELIQAYLYVETERYGERLNVTWEVDWDLNVLIPPLAIQPLLENAVRHGIMKRASGG 967 Query: 477 VVTISVAECGNRVRIAVRDTGHGIDPKVI-ERVEANEMPGNKIGLLNVHHRVKLLYGEGL 535 + + +A + + + V D G G++P + + + A + IGL N + R+ +G GL Sbjct: 968 TIRVRIAMQEDFIIVEVTDNGLGMEPDQVTQLLNAPDHRKGGIGLYNTNRRLLQTFGSGL 1027 Query: 536 HIRRL-EPGTEIAFYIPNQ 553 I+ GT ++F IP Q Sbjct: 1028 VIKSTMNQGTTVSFQIPAQ 1046 Score = 61.3 bits (148), Expect = 8e-08, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 14/105 (13%) Query: 456 LIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPG 515 ++ L+ NAI + KG VT+S G+++ I V DTG G+DP+ + R+ G Sbjct: 568 ILLNLIHNAIKY-----TEKGSVTVSAFTKGSKMTILVTDTGIGMDPQTLNRIFLPYEQG 622 Query: 516 N-------KIGL-LNVHHRVKLLYGEGLHIRR-LEPGTEIAFYIP 551 N IGL L++ + L+ L + GT AF +P Sbjct: 623 NQGLNDAKGIGLGLSISKELVELHDGELTVESESGKGTTFAFTLP 667 >UniRef50_A9KL84 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KL84_CLOPH Length = 580 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 68/239 (28%), Positives = 118/239 (49%), Gaps = 15/239 (6%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISS-S 383 + ++ M +S ++ R ++ AE + LQS+INPHFL+N L+ + + Sbjct: 338 LANNFYTMTEQISFLM------ERIKEEEVAKRTAEFQVLQSQINPHFLYNTLDNLQWRA 391 Query: 384 IRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 N ++I LS + R ++ E I + KE+ +K Y+ I+Q R+ D L Sbjct: 392 YDHNALELSEMIEALSDFFRISLS-DGKEFISVIKEIEHVKSYLFIQQKRYEDILNFTIS 450 Query: 444 IDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 D +V L++QPLVENA+ HGI+P G + + V + ++I V+D G G+ P Sbjct: 451 CDPDVSEYVTIKLIVQPLVENALYHGIKPKLSHGTIAVRVLRKEDTIQIIVQDDGVGMSP 510 Query: 503 KVIERVEAN---EMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRT 555 ++ + + + PG GL N+H R++++YG+ I + GT IP + Sbjct: 511 PKLKTLLRSLEQDAPGKGYGLYNIHRRIQMVYGKEYGISITSEEQIGTTATIIIPAVKE 569 >UniRef50_B9MLE3 Putative sensor with HAMP domain n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MLE3_ANATD Length = 587 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 72/256 (28%), Positives = 130/256 (50%), Gaps = 11/256 (4%) Query: 308 KGVVTGTLKIYYCHA-HQITSSLQEMAVGLSQIISTQLEVS-RAEQLREMANKAELRALQ 365 G + +++I Q+ +++EMA + +I + +Q+ + + L Sbjct: 330 HGKLDTSIEILGKDEIGQLAENVKEMAKNIKNLIEQVYLAEIQKQQMITKQREIQFEMLC 389 Query: 366 SKINPHFLFNALNAISSSIR-LNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIK 424 S+INPHF+FN L AI + +++ LS LR +I + E I +K+E+ ++ Sbjct: 390 SQINPHFIFNTLEAIRMKAFCSGQEEISHIVYLLSNLLRKSITVSS-ELISLKEEIEFVQ 448 Query: 425 DYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVA 483 ++ I++ RFGD++ IDE++ N I +IQPLVEN+I HGI+P GKG ++I + Sbjct: 449 QFLEIQKFRFGDRIDFDIQIDEDLFNQKILPFIIQPLVENSIKHGIEPKVGKGYISIRIF 508 Query: 484 ECGNRVRIAVRDTGHGIDPKVIER---VEANEMPGNKIGLLNVHHRVKLLYGEGLHI--- 537 + ++ I V D G G+ + + + ++ +GL NV+ R+KL YG Sbjct: 509 KRDEKIVIRVEDNGIGMKKEECDNLITLLKSDQKDAHVGLRNVYTRLKLFYGNEFEFLIK 568 Query: 538 RRLEPGTEIAFYIPNQ 553 GT + +P++ Sbjct: 569 SEYGSGTVVEITVPSK 584 >UniRef50_C6CT65 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CT65_PAESJ Length = 584 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 87/280 (31%), Positives = 146/280 (52%), Gaps = 32/280 (11%) Query: 290 EAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRA 349 +A R + S+ IP V + TL+I +++ ++ +M L+++I E Sbjct: 315 KAMRGAKYGSLKPIP-----VTSSTLEI-----NELNNTYNQMVAYLNELIEVVYEKEII 364 Query: 350 EQLREMANKAELRALQSKINPHFLFNALNAISSSIR-LNPDTARQLIFNLSRYLRYNIEL 408 + ++ EL+ALQ++INPHFLFN L A+ ++ + + Q++ +S RY I Sbjct: 365 Q------SRTELKALQAQINPHFLFNTLEALYWALEDKDEEELSQVVVAMSGLFRYVINR 418 Query: 409 -KDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIV 466 DE + + EL + Y+ I + R D+L + DE + IP LLIQPLVENAI Sbjct: 419 ADGDEWVTVADELEHAERYLKIMEMRLIDRLKWSIEGDESLRGVPIPKLLIQPLVENAIS 478 Query: 467 HGIQPCKGKGVVTISVAECG--NRVRIAVRDTGHGIDPKVIERVEA-------NEMPGNK 517 HG++ G+G V I + + +RI+V D G G++ ++ + A ++ G Sbjct: 479 HGVEQRIGQGSVVIGIEKTERPGYIRISVTDNGPGMNFDKVQSLYAAMKQGHVHDAKGTG 538 Query: 518 IGLLNVHHRVKLLYG---EGLHIRRLEP-GTEIAFYIPNQ 553 +G+ NV R++L YG EGL I+ + GT ++F IP + Sbjct: 539 VGISNVDRRIRLYYGEETEGLQIQSEQGTGTRMSFEIPIE 578 >UniRef50_C6LBC4 Sensor histidine kinase n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LBC4_9FIRM Length = 605 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 70/245 (28%), Positives = 123/245 (50%), Gaps = 15/245 (6%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSS 383 +I + ++ +I Q E+ +Q K + ALQ++INPHFL+N L+++ Sbjct: 367 EIGREFNHLVRRINHLIEQQREMYEQKQ------KLSMDALQAQINPHFLYNTLDSVRWM 420 Query: 384 IRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIY 442 + N D + +L LR N+ +++ +++EL ++DY+ ++Q R+ + I Sbjct: 421 AVIQNADNIANTVMSLENLLR-NMAKGSGDKVTLREELSLVQDYVNLQQVRYMEVFDYIC 479 Query: 443 DIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGID 501 ++ EE + I + +QP++ENAIVHGI+P GV+ + G + I++ D G G+D Sbjct: 480 EVPEEYRDYLIVKMTMQPIIENAIVHGIEPTGTYGVIRVYARAEGGALYISIEDNGMGMD 539 Query: 502 PKVIERVEANEMPGN---KIGLLNVHHRVKLLYGEGLH-IRRLEPG--TEIAFYIPNQRT 555 I + + N IG+ NV R+KL+YG I E G T + +IP + Sbjct: 540 ETEIREILKAKKNKNSMSGIGVTNVDERLKLIYGPDYGLIFEGEEGKFTRVTIHIPMETG 599 Query: 556 PVASQ 560 S Sbjct: 600 KEESD 604 >UniRef50_UPI0001788114 integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788114 Length = 602 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 69/239 (28%), Positives = 122/239 (51%), Gaps = 12/239 (5%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQLREMAN-KAELRALQSKINPHFLFNALNAISS 382 Q++ M ++ +++ E + ++L E + + + + S+INPHFLFNAL +I Sbjct: 352 QLSRQFNSMVGNVNDLMNEVQESNEQKRLMEQKQNEIKFKMMASQINPHFLFNALESIRM 411 Query: 383 SIRLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVI 441 L + +++ L + +R N+E+ + IK E+ ++ Y+ I++ R+ D+L Sbjct: 412 EAHLKGETEIARIVRLLGKMMRSNLEVGSGK-TTIKDEIEMVQCYLDIQKFRYEDRLKYE 470 Query: 442 YDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGI 500 +D E N IP L+IQPLVENA++HG+ + + + V ++ + D G GI Sbjct: 471 LQVDPEANRVRIPPLIIQPLVENAVIHGMDHKEEGTSIKVRVTASEGKLHVMTEDNGAGI 530 Query: 501 DPKVIERV-----EANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIP 551 ++ + + +E G +IGL NVH R++L YG + GT I F IP Sbjct: 531 SLDKLQMIYGYLNDTDEKDGGRIGLRNVHVRLQLTYGPEAGLIIYSEPGIGTRIEFSIP 589 >UniRef50_C5EWK9 Histidine kinase internal region n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EWK9_9FIRM Length = 622 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 62/233 (26%), Positives = 126/233 (54%), Gaps = 13/233 (5%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSS 383 +I S M L + + + R + L EL LQ++INPHF++N L++I Sbjct: 389 EIADSFNYMVDRLEKQVEEIRAMDRKKHL------LELDFLQAQINPHFIYNTLSSIRFY 442 Query: 384 IRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIY 442 + + + A ++ + S+ LR + + ++ I +++E+ ++ Y+ +++AR+ +++ V++ Sbjct: 443 VEMGKNEEAEDMLIDFSKILRKTLS-RTEQFITLREEMETLRHYVNLQKARYRERVEVVF 501 Query: 443 DIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGID 501 D++E + +P ++QP+VENAI + ++ K + I + ++V+D G G+D Sbjct: 502 DVEESTLPALVPDFILQPIVENAIFYSLKEDK-VCHIRIKSYMDQGNLCVSVKDDGVGMD 560 Query: 502 PKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLH---IRRLEPGTEIAFYIP 551 + I V +M NK+G+ NV+ R+KL +G+ I GTE+ +P Sbjct: 561 AEKISTVLNKDMNINKVGIKNVNERLKLNFGDVYGLKIISEEGRGTEVILVMP 613 >UniRef50_C6J594 Histidine kinase internal region n=2 Tax=Bacillales RepID=C6J594_9BACL Length = 586 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 79/247 (31%), Positives = 127/247 (51%), Gaps = 24/247 (9%) Query: 323 HQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISS 382 +++ +S +M ++++I E + ++ EL+ALQ++INPHFLFN L A Sbjct: 339 NELNNSYNQMVDNMNELIRVVYEK------ELLQSRTELKALQAQINPHFLFNTLEAFYW 392 Query: 383 SIR-LNPDTARQLIFNLSRYLRYNIEL-KDDEQIDIKKELYQIKDYIAIEQARFGDKLTV 440 S+ + L+ +S RY I DE + I+ EL ++ Y+ + R ++LT Sbjct: 393 SLEDKGEEELANLVVGMSNLFRYIISSPNQDEWVTIEDELEHVERYLQLMTIRLAERLTW 452 Query: 441 IYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVA--ECGNRVRIAVRDTGH 498 D E + IP LLIQPLVENAI+HG++ G+G V++ V + V+I VRD G Sbjct: 453 SIDAGEFRHVKIPKLLIQPLVENAILHGVEKQLGQGKVSVCVESSDKEGYVKITVRDNGP 512 Query: 499 GIDPKVIERVEAN-------EMPGNKIGLLNVHHRVKLLYGE------GLHI-RRLEPGT 544 G+D + + + G +G++NV R++L Y E GL + R GT Sbjct: 513 GMDEETLNGLLQAMEGGPSISSKGTGVGIVNVQRRLRLYYDEEQGKKHGLQVTSRPGEGT 572 Query: 545 EIAFYIP 551 ++F IP Sbjct: 573 SVSFEIP 579 >UniRef50_C5EMP2 Signal transduction histidine kinase n=3 Tax=Clostridiales RepID=C5EMP2_9FIRM Length = 503 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 83/308 (26%), Positives = 144/308 (46%), Gaps = 41/308 (13%) Query: 267 DDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQIT 326 D ++P T A + K++ + N TP + E G+VTGT Sbjct: 209 RDIVTPLTNLA-HTAKLVGQGNFHVKVTP------IKTRDELGIVTGT------------ 249 Query: 327 SSLQEMAVGLSQIISTQLEVSRAEQLREM--------ANKAELRALQSKINPHFLFNALN 378 +M L + ++ E + EQ + +A L+ LQS+INPHFLFN+LN Sbjct: 250 --FNQMVDSLDEYVNKIKESAEKEQEMKARELLMANHLKEARLKYLQSQINPHFLFNSLN 307 Query: 379 A-ISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDK 437 A + ++ + + I ++ + RYN++ + I++E+ + +YI I RF Sbjct: 308 AGVQLAVMEDAEKTSVFIERMADFFRYNVKKGSGDA-TIREEVETVDNYIYILNVRFAGD 366 Query: 438 LTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 + + ++DE ++ IPS+++QPLVENA+ HGI+ + G + + V + G ++ I V D Sbjct: 367 IHYVSELDETVLDYRIPSMILQPLVENAVNHGIRGIEWPGEIRLRVQDKGGQIEIRVEDN 426 Query: 497 GHGIDPKVIERVEAN-----EMPGNKIGLLNVHHRVKLLYGEG--LHIRRLEP--GTEIA 547 G G+ + + + + + IGL NV R++L YG I GT + Sbjct: 427 GKGMTREQVGTILSGSHITVDSDSTGIGLGNVIARLRLYYGTDQVFCIDSKGENQGTSVI 486 Query: 548 FYIPNQRT 555 IP + Sbjct: 487 LTIPKKEE 494 >UniRef50_A6NTG2 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NTG2_9BACE Length = 576 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 65/236 (27%), Positives = 121/236 (51%), Gaps = 14/236 (5%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSS 383 +I + M LS ++ + R ++L AEL LQ++INPHF++N L++I Sbjct: 350 RIQMAFNGMVDQLSTLLESVKREEREKRL------AELDFLQAQINPHFIYNTLSSIRFL 403 Query: 384 IRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIY 442 + ++ A +++F S+ LR + + DE I + +EL ++ Y+ +++ R+ + Sbjct: 404 LEMDKVQEAGEMVFYFSKLLRQTLS-RSDEFIPLGEELEMLECYVDLQRLRYPETFRYSC 462 Query: 443 DIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGID 501 ++D + +P LL+QP+VEN+I HG+ + + + G+ + + V D G GI Sbjct: 463 EVDRSLWGNTLPKLLLQPVVENSIFHGVGQ--HQIHIRVRGWLEGDALILQVEDDGVGIS 520 Query: 502 PKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRRLE---PGTEIAFYIPNQR 554 +E V ++ N++GL NV R++L YG + GT + F +P R Sbjct: 521 KDKLEHVMNKDLQINRVGLKNVQDRIRLNYGPEYGLTIAGGPSGGTVVTFRLPRTR 576 >UniRef50_Q182U1 Two-component sensor histidine kinase n=6 Tax=cellular organisms RepID=Q182U1_CLOD6 Length = 400 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 100/315 (31%), Positives = 180/315 (57%), Gaps = 7/315 (2%) Query: 6 NMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVP 65 ++L+A+ ++ +L+++ + ++++F+++ K +S +L+ + +F+ A+F T+SG+ Sbjct: 4 SILIALIEKTSLIVVLFLLITKLKIFKQIFQKEEYSFNDLVCIALVFTFLAIFGTYSGIN 63 Query: 66 VEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCIS 125 GS+VN RII+++SGGILFGP VGI GV +GIHRY +DIGG+T++PC ++SILAG +S Sbjct: 64 YMGSIVNTRIISIVSGGILFGPMVGITAGVFSGIHRYFMDIGGITSVPCLLSSILAGVLS 123 Query: 126 GWINLKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILGSVCIG 185 G++ +IPK R GIL GM+ E+ T++L+ + + +L I I+ I +P+I+G + IG Sbjct: 124 GFLYKRIPKQHRVMYGILVGMISESFTILLIYLISYPHSLAIQIIGGIYLPLIVGQIGIG 183 Query: 186 FIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIHADAVA 245 F++ +V+ +E +K+ AR + + P F SL + IR Sbjct: 184 FVISIVEGIEKDKKDIEARNKAEIKALQRQINPHF---LFNSLNTIASFIRFSPDKAREL 240 Query: 246 ITNTDHVLAYVGVGEHN----YQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSML 301 I N L Y N + + S + +G+++ + D +I S++ Sbjct: 241 IINLSTYLRYNLEYSDNLIDINKEIEQVKSFVEIEKARFGELLTVSYDIEDVNIKIPSLI 300 Query: 302 VIPLWEKGVVTGTLK 316 + PL E ++ G L+ Sbjct: 301 IQPLVENAIIHGILE 315 Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats. Identities = 119/221 (53%), Positives = 156/221 (70%), Gaps = 6/221 (2%) Query: 334 VGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQ 393 +G+ +IS + + ++ E NKAE++ALQ +INPHFLFN+LN I+S IR +PD AR+ Sbjct: 180 IGIGFVISIVEGIEKDKKDIEARNKAEIKALQRQINPHFLFNSLNTIASFIRFSPDKARE 239 Query: 394 LIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIP 453 LI NLS YLRYN+E D IDI KE+ Q+K ++ IE+ARFG+ LTV YDI E+VN IP Sbjct: 240 LIINLSTYLRYNLEYS-DNLIDINKEIEQVKSFVEIEKARFGELLTVSYDI-EDVNIKIP 297 Query: 454 SLLIQPLVENAIVHGIQPCKGKGVVTISVAE----CGNRVRIAVRDTGHGIDPKVIERVE 509 SL+IQPLVENAI+HGI GVV IS+ + N VRI++ D G GI ++I V Sbjct: 298 SLIIQPLVENAIIHGILESGRAGVVKISIKKLPYSLENTVRISIEDNGIGISEEIINNVY 357 Query: 510 ANEMPGNKIGLLNVHHRVKLLYGEGLHIRRLEPGTEIAFYI 550 + MP NKIGL NVH R+KL+YG GL+IRR++ GT I FY+ Sbjct: 358 QDNMPENKIGLYNVHLRLKLMYGRGLNIRRIDNGTLIVFYV 398 >UniRef50_C1F299 Regulator of cell autolysis n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F299_ACIC5 Length = 432 Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 83/233 (35%), Positives = 129/233 (55%), Gaps = 9/233 (3%) Query: 332 MAVGLSQIISTQLEVSR-AEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDT 390 M VG+ I + + + ++ + + +A L ALQ +INPHFLFN LN+I S +R +PD Sbjct: 185 MVVGIPLKIWNAVRIEQSLKEQKRLLLEARLDALQRQINPHFLFNTLNSIGSLVRRDPDQ 244 Query: 391 ARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFG-DKLTVIYDIDE-EV 448 AR++I L+ LR + D + ++EL +DY+ IE RFG DKL V+ +ID + Sbjct: 245 AREMIVKLANILRA-LLKDHDSFVAFREELRFTEDYLGIEVVRFGTDKLRVVKEIDARTL 303 Query: 449 NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV 508 +PS+L+QPLVEN+I HG++P G VT+ G+R + V D G G+ + Sbjct: 304 ELPVPSMLLQPLVENSIKHGLEPRIHGGTVTLRSRLEGDRFILEVEDDGVGVAAS--SQR 361 Query: 509 EANEMPGNKIGLLNVHHRVKLLYGEGLH---IRRLEPGTEIAFYIPNQRTPVA 558 A GN +G+ NV R+++L+G H + R GT + +P P + Sbjct: 362 PAGMRTGNGVGMRNVRERLEVLFGGAAHFNVVSRPGRGTRVIMEMPVDSEPGS 414 >UniRef50_A4XMF9 Integral membrane sensor signal transduction histidine kinase n=2 Tax=Thermoanaerobacterales RepID=A4XMF9_CALS8 Length = 596 Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 66/236 (27%), Positives = 120/236 (50%), Gaps = 16/236 (6%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 + S M ++++I+ L +L +AEL+AL+++INPHFL+N L+ I Sbjct: 360 VVSEYNNMVEKINELINKVL------KLEIHKKEAELKALEAQINPHFLYNTLDTIFWKA 413 Query: 385 RLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 + D ++I++LSR R + + E I +K E I+ Y+ ++ R+ ++L + Sbjct: 414 EKSHDSEISEMIYSLSRLFRLTLN-RGSEFIQVKGEKELIEHYLFLQSKRYKNRLQYSIE 472 Query: 444 IDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 ID E ++ IP L++QP VENAIVHG++ + I+ + G + ++D G G+ Sbjct: 473 IDPEILDYYIPKLILQPFVENAIVHGMENSTTPTFIQITGKKEGENLCFTIKDNGIGMSK 532 Query: 503 KVIERVEANEMPGN----KIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIP 551 ++R++ G + NV+ R+KL Y + + GTE+ +P Sbjct: 533 TQLDRIKDLLESGKEATFGYAIKNVNERLKLYYETHFKLNIQSQPGQGTEVKLILP 588 >UniRef50_A6TTD2 Histidine kinase internal region n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TTD2_ALKMQ Length = 578 Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 76/245 (31%), Positives = 124/245 (50%), Gaps = 22/245 (8%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSS 383 ++ + ++ + ++ E +AEL+ALQ++INPHFL+N L A+ S Sbjct: 340 ELNKTYNQLVENTNHLMEVVYEK------ELCLRQAELKALQAQINPHFLYNTLEALYWS 393 Query: 384 IRLNPDTARQLIFNLSRYLRYNIELK--DDEQIDIKKELYQIKDYIAIEQARFGDKLTVI 441 + + +++ +S RY I + E + +K+EL ++ Y+ + + RFGD+LT Sbjct: 394 LEEKGEELAEVVVAMSDLFRYTISGPKVEQEWVLVKEELEHVERYLQVMKMRFGDRLTWY 453 Query: 442 YDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVA--ECGNRVRIAVRDTGHG 499 + N IP LLIQPLVENAI+HG+ G+G V++ V + +R+ I V D G G Sbjct: 454 VSSPSDCNVKIPKLLIQPLVENAILHGVGNKNGQGTVSVIVEDFKLHSRLVIKVIDDGPG 513 Query: 500 IDPKVIERVEANEMPG-------NKIGLLNVHHRVKLLY----GEGLHIRR-LEPGTEIA 547 I+ + + + G + + NVH R+KL Y G GL I + GT + Sbjct: 514 IEVDALYSIMQSLKFGRVASIKEKGMAIANVHKRLKLYYKDDEGSGLSIESKVNQGTCVT 573 Query: 548 FYIPN 552 F IP Sbjct: 574 FEIPY 578 >UniRef50_C5RQ55 Signal transduction histidine kinase, LytS n=2 Tax=Clostridium cellulovorans 743B RepID=C5RQ55_CLOCL Length = 640 Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats. Identities = 80/201 (39%), Positives = 122/201 (60%), Gaps = 2/201 (0%) Query: 353 REMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELK-DD 411 E K+ELR LQ++I PHFLFN LN I R + + A +L+ NLS YLR K DD Sbjct: 433 EEQLLKSELRMLQAQIKPHFLFNTLNTIICVCRESSEKAEELLLNLSNYLRCGFSFKNDD 492 Query: 412 EQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQP 471 E D++ EL +K Y+ IE+ARF DKL +I+DID ++C +P+ +IQP+VEN++ HGI P Sbjct: 493 EFADLETELLHVKSYLHIEKARFLDKLNIIFDIDTNIHCKVPAYIIQPIVENSVRHGILP 552 Query: 472 CKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLY 531 CK G V ++V + N + I V D G G+ + + + + IG+ N+ +R++ +Y Sbjct: 553 CKDGGTVRLTVKKNNNMLIIIVEDDGVGMTEEKLTALLNSSDKKAGIGISNIQNRIQRIY 612 Query: 532 GEGLHIRRL-EPGTEIAFYIP 551 G+ + I+ GT + +P Sbjct: 613 GKSIKIKSTKGIGTIVTLELP 633 >UniRef50_C0Z9X4 Sensor protein n=2 Tax=Bacillales RepID=C0Z9X4_BREBN Length = 1050 Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats. Identities = 77/216 (35%), Positives = 124/216 (57%), Gaps = 3/216 (1%) Query: 338 QIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFN 397 +I S ++ +Q + E LQ++I PHFLFNAL+A+++ +N D R L++ Sbjct: 817 EIKSRIEALTTIKQSVREQLRLEAAWLQAQIQPHFLFNALSAVTALSDINLDKMRDLLYE 876 Query: 398 LSRYLRYNIELKD-DEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLL 456 S +LR + +D D + I+ EL ++ Y+ IE+ RF ++L V+++ID+ + IP L Sbjct: 877 FSNFLRNKFKFEDMDGLVPIETELSLVRSYLYIEKVRFEERLQVVWEIDDCEDVKIPFLT 936 Query: 457 IQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIER-VEANEMPG 515 IQPLVENAI HG+ G +TI ++ V I V D G G+D I+R +E Sbjct: 937 IQPLVENAIKHGVMNRIRGGEITIRISVQETHVEITVEDDGIGMDEDQIQRLLERKADSR 996 Query: 516 NKIGLLNVHHRVKLLYGEGLHIRRLEP-GTEIAFYI 550 + +GL+N R+K +G GLHI + GT++ F++ Sbjct: 997 SGVGLINTDQRLKRHFGTGLHIESTQGTGTKVTFHV 1032 Score = 47.4 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 17/102 (16%) Query: 460 LVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV----------E 509 L+ NA+ + +G+V+I R I + DTG G+D + +R+ E Sbjct: 564 LLHNAVKY-----TNEGIVSIQAFAKDGRAFIEIHDTGIGMDEDMKKRLFHPYEQASTSE 618 Query: 510 ANEMPGNKIGLLNVHHRVKLLYGEGLHIRR-LEPGTEIAFYI 550 G +GL + ++ L+G + L G+ F + Sbjct: 619 TMIEGGFGLGLS-ISKQLVELHGGTFDVSSVLGEGSTFTFSL 659 >UniRef50_B8HZZ4 Putative sensor with HAMP domain n=2 Tax=Clostridium RepID=B8HZZ4_CLOCE Length = 597 Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats. Identities = 69/255 (27%), Positives = 121/255 (47%), Gaps = 18/255 (7%) Query: 314 TLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFL 373 + Y Q++ M + +++ E + + E +ALQS+INPHFL Sbjct: 351 SFPTYGPDFQQVSQGFNIMVEHIDELMKKIYE------EQRQLKEIEFKALQSQINPHFL 404 Query: 374 FNALNAISSSIRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQA 432 +N L +I L ++ L+ + R ++ K ++ I +K E +++Y+ I++ Sbjct: 405 YNTLESIHWQALLYGHHDISTMVKALAGFYRISLS-KGEDIIPLKNESEHVENYMTIQEI 463 Query: 433 RFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRI 491 R+ DK+ DI EE + IP +++QPLVENAI HG++ K KG + I+ G+ + + Sbjct: 464 RYKDKMESYIDIPEEFYDVKIPKMILQPLVENAIYHGLRGRKAKGFIKITAERDGDDIIV 523 Query: 492 AVRDTGHGIDPKVIERVE---ANEMPGNKIGLLNVHHRVKLLYGE--GLHIRRLE-PGTE 545 D G G+ I ++ + P G+ NVH R+KL G GL+ E G Sbjct: 524 KTIDNGTGMTVDQICKLNQTLEDNDPSVGYGVRNVHRRIKLFLGSPYGLYYESNEYGGVT 583 Query: 546 IAFYIPNQRTPVASQ 560 + + R+ + Sbjct: 584 VNVRL---RSEIHKN 595 >UniRef50_C2KZS6 Two-component sensor histidine kinase n=1 Tax=Oribacterium sinus F0268 RepID=C2KZS6_9FIRM Length = 563 Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats. Identities = 76/270 (28%), Positives = 129/270 (47%), Gaps = 26/270 (9%) Query: 297 IHSMLVIPLWE-----KGVVTGTLKIYYCHAHQ-----ITSSLQEMAVGLSQIISTQLEV 346 + + PL E + +G I + + S M + ++I E Sbjct: 291 LAWTITKPLKELSKAMEKAQSGNFDIQVHTNQKDEIGSLIQSYNFMLGEIKRLIHVVTE- 349 Query: 347 SRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI-RLNPDTARQLIFNLSRYLRYN 405 + AEL ALQ++INPHFL+N L+ I+ + D LI L L+Y+ Sbjct: 350 -----EKMAQKTAELNALQAQINPHFLYNTLDTINWMLLARGEDDISDLIVRLGELLKYS 404 Query: 406 IELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENA 464 I + + +++E+ I++Y+ I++ R ++L I+E N P LL+QPLVENA Sbjct: 405 IS-GANTLVPLQEEVRYIRNYLEIQKCRMEERLEYAISIEEACNAYPCPKLLLQPLVENA 463 Query: 465 IVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVH 524 I HG++P G V I ++I V D G G++ + I+ + ++ +GL NV Sbjct: 464 IKHGLEPLARGGKVCIIAVIDQGELKITVIDDGQGMEAEKIQDILLDK----GVGLNNVE 519 Query: 525 HRVKLLYGEGLHIR---RLEPGTEIAFYIP 551 R+KL+YG+ +R + GT + ++P Sbjct: 520 KRIKLIYGQSYGLRIHSQKNNGTTVEIHLP 549 >UniRef50_Q1IJB8 Periplasmic sensor signal transduction histidine kinase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJB8_ACIBL Length = 446 Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats. Identities = 80/227 (35%), Positives = 124/227 (54%), Gaps = 14/227 (6%) Query: 333 AVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTAR 392 A+ L + + ++E ++ E+ + + L ALQS+INPHFLFN LN++SS +R NPD AR Sbjct: 208 AIALKVLNNARIE-NKLEEQERLLLQIRLEALQSQINPHFLFNTLNSVSSLVRFNPDKAR 266 Query: 393 QLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFG-DKLTVIYDIDE-EVNC 450 ++I L+ LR + D + +++E+ I DY+ IE RFG DKL V +++ ++ Sbjct: 267 EMIVKLANILRR-LMRTTDAFVPLREEVDFIDDYLDIEVVRFGTDKLRVQKELEPASLDV 325 Query: 451 CIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEA 510 +PS+++QPLVENAI HG+ P G + + NRV I V D G G + Sbjct: 326 MVPSMMLQPLVENAIKHGVAPRIEGGSIYLRSRVADNRVVIEVEDDGVGFT-------DG 378 Query: 511 NEMPGNKIGLLNVHHRVKLLYGEGLHIR---RLEPGTEIAFYIPNQR 554 G IG+ NV R+ +LYG+ I GT + +P + Sbjct: 379 APSSGTGIGMANVTERLNVLYGDSAVIETDSTPGKGTLVRLTLPIPQ 425 >UniRef50_UPI0001C353EA YesM n=2 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C353EA Length = 599 Score = 240 bits (614), Expect = 8e-62, Method: Composition-based stats. Identities = 61/242 (25%), Positives = 116/242 (47%), Gaps = 14/242 (5%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 +T + + +I E + + + + LQ++INPHFL+N LN+I+ I Sbjct: 366 MTQEFKVTLDKIDYLIHENYEK------QFLLKDTKYKMLQAQINPHFLYNTLNSINWMI 419 Query: 385 R-LNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 R D A ++ L LR + + + + +EL ++ Y+ I++ R+ ++ + Sbjct: 420 RARKNDEAAEMTVALGTILRSALN--KQQYVAVDEELDSLRKYMTIQEYRYRKRVAFSVE 477 Query: 444 IDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPK 503 + IP + +QPLVEN+I HG + +++++ E G R+ I V D G G+ + Sbjct: 478 CEVSGQYLIPHMTLQPLVENSIYHGGEKMLTPCKISVTIREEGGRITITVSDNGPGMTEE 537 Query: 504 VIERVE--ANEMPGNKIGLLNVHHRVKLLYGEG--LHIRRL-EPGTEIAFYIPNQRTPVA 558 +E V E G+ IGL N++ R+K+ + + I + GT + IP ++ Sbjct: 538 ELEAVRTFTAEPKGHGIGLKNIYERLKMAFDQEAYFDISSVPGGGTTVTIKIPKAEVMIS 597 Query: 559 SQ 560 + Sbjct: 598 DE 599 >UniRef50_C6CV60 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CV60_PAESJ Length = 611 Score = 240 bits (614), Expect = 8e-62, Method: Composition-based stats. Identities = 66/247 (26%), Positives = 115/247 (46%), Gaps = 20/247 (8%) Query: 318 YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNAL 377 Y +T M + ++ + EQ +AEL+ALQ++INPHFL+N L Sbjct: 354 YGDEIGYLTQGYNSMVESIKALVDDAYVLRLREQ------EAELKALQAQINPHFLYNML 407 Query: 378 NAISSSIRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGD 436 + I + ++I NLSR R ++ + ++ KE ++ Y+++++ RF D Sbjct: 408 DTIFWEAESAGQEKISEMIINLSRLFRLSLN-RGKSFTNVAKERELLELYLSLQKMRFRD 466 Query: 437 KLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRD 495 L DI ++ I LL+QP VENAIVHGI+ +G G V ++ G+R++ + D Sbjct: 467 VLEYEVDISPDLGEYVILKLLLQPFVENAIVHGIERKRGGGFVRVTGTREGDRLKFVIED 526 Query: 496 TGHGIDPKVIERVEANEMPG--------NKIGLLNVHHRVKLLYGEGLHI---RRLEPGT 544 G G+ + + ++ + + NV R+K Y + + + GT Sbjct: 527 NGSGMGEEELAKLTELPKESDINVGQDTSGYAVRNVQERLKHYYKDDFELTYDSKPGQGT 586 Query: 545 EIAFYIP 551 + IP Sbjct: 587 RVQLIIP 593 >UniRef50_C6JDI9 Histidine kinase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDI9_9FIRM Length = 595 Score = 240 bits (614), Expect = 9e-62, Method: Composition-based stats. Identities = 72/230 (31%), Positives = 117/230 (50%), Gaps = 14/230 (6%) Query: 329 LQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI-RLN 387 L EM L ++ + E + E+ +L ++NPHFL+N+LN I+ + Sbjct: 368 LNEMNQNLQMLVHEKYE------MMIQKRDTEIMSLNIQMNPHFLYNSLNIINWVCLKGE 421 Query: 388 PDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE 447 + A +++ +LSR L+Y D + + +EL +K YI I Q R+ D+ V DI E Sbjct: 422 QENASKMLLDLSRMLQYT-SQNGDVLVPLWEELDWLKRYIGIMQKRYQDQFEVSMDIPEY 480 Query: 448 VNCC-IPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIE 506 + +P L +QP VENAIVHG + + G + IS E N + V D G GI + ++ Sbjct: 481 LRSLEVPKLFLQPFVENAIVHGFKNYQDSGKIWISAEEEENDILFYVEDNGCGICEEDLK 540 Query: 507 RVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQ 553 V E IG+ N + R++++YGE + +LE GT + +P + Sbjct: 541 EVLNKERK--SIGVRNTNKRIRMIYGEKYGVTISSQLEEGTVVTIRLPLK 588 >UniRef50_C6CSY1 Histidine kinase n=2 Tax=Paenibacillus RepID=C6CSY1_PAESJ Length = 600 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 65/254 (25%), Positives = 122/254 (48%), Gaps = 20/254 (7%) Query: 318 YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNAL 377 Y ++T S M + ++I + Q++ +A+L ALQ +INPHFL+N L Sbjct: 352 YRDDISELTRSFNFMTEKIRELIEQRY------QMQLRNKEAQLLALQMQINPHFLYNTL 405 Query: 378 NAISS-SIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGD 436 I ++ + ++ +L RY+ + E +++EL + +Y+ I+Q RF + Sbjct: 406 QTIGGKAVLIGDYEIPEMCRSLGDLFRYSFYEGNTES-TVRQELAHVGNYLYIQQFRFEE 464 Query: 437 KLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGI-QPCKGKGVVTISVAECGNRVRIAVR 494 L + +D+ E + ++QP++ENA++H + P G+ ++ + + ++V Sbjct: 465 SLRMEFDVPESLMEASTIRFVMQPIIENAVIHALGGPDDGQLLIRVKAETDEGTIVLSVS 524 Query: 495 DTGHGIDPKVIERVEANEMP-------GNKIGLLNVHHRVKLLYGEGLHIR---RLEPGT 544 D G GI P + + + G IGL NVH R++L YG+ + +L GT Sbjct: 525 DNGPGIAPDKLAVLRNDMEKKSMEVFSGVSIGLKNVHERIRLAYGDSYGLELDSKLGEGT 584 Query: 545 EIAFYIPNQRTPVA 558 I IP ++ + Sbjct: 585 VIRIRIPCRKRGES 598 >UniRef50_C6IY73 Two-component sensor histidine kinase n=3 Tax=Bacillales RepID=C6IY73_9BACL Length = 641 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 73/258 (28%), Positives = 115/258 (44%), Gaps = 34/258 (13%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 + M + +++S E +AELR+LQ+ I PHFL+N L+ I Sbjct: 381 LGRRFNAMLQQIHRLLSL------TELQERQKREAELRSLQAHIKPHFLYNTLDTIHWMA 434 Query: 385 RLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 R N + ++ +LS+ R + K ++ I + E+ ++ Y+ I+ R+ KL Sbjct: 435 RRNGSEDIAEMAESLSKLFRIGLS-KGNDIIPLNDEIEHVRSYLHIQHVRYQSKLDYSLH 493 Query: 444 IDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 I E+ + L++QP+VENAI HGI+ +G G V I AE + I +RD G GI P Sbjct: 494 IAPEIRGVYVLKLILQPIVENAIYHGIKERRGPGRVVIEAAEDAGMLVITIRDDGKGIPP 553 Query: 503 KVIERVEANEMP----------------------GNKIGLLNVHHRVKLLYGE--GLHIR 538 + R++ G G+LNV R+ L +G GL I+ Sbjct: 554 DKLARLQKELQSAGTADGREKGSEPAGASNAGEGGQGYGMLNVQARIALTFGPKYGLTIQ 613 Query: 539 RLEP-GTEIAFYIPNQRT 555 E GT + P R Sbjct: 614 SEEGRGTVVTVTHPIIRD 631 >UniRef50_UPI0001788A19 integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788A19 Length = 610 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 133/276 (48%), Gaps = 27/276 (9%) Query: 300 MLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKA 359 + + L E G ++ + ++ S M + +++ + E +A Sbjct: 340 VRKMRLVELGDFKQSVPVTEDEIGRLGSGFNRMVEEIDRLVHEVYVLGMRE------REA 393 Query: 360 ELRALQSKINPHFLFNALNAISSSIRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKK 418 EL ALQS+I PHF++N L +IS R N + ++ L R +R +E +D I + + Sbjct: 394 ELAALQSQIQPHFIYNTLESISMLARQRNNEDVSEMATALGRLIRSAVE-QDRSLIRLGE 452 Query: 419 ELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGV 477 EL + YI I++ R G +L ++DI+E ++ C +P LL+QPL+ENAI+HGI + G Sbjct: 453 ELETAESYIRIQKMRHGSRLQAMFDIEEGLDDCLVPKLLLQPLIENAIMHGIGDREQGGT 512 Query: 478 VTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMP---------------GNKIGLLN 522 V ++VA + V + VRD G G+ + ++A+ G+ + L N Sbjct: 513 VYVTVARFEDEVLLTVRDDGRGLSEDELAALQASLEEAGDDVAAKTPAMPLRGHGVALKN 572 Query: 523 VHHRVKLLYGEGLHIR---RLEPGTEIAFYIPNQRT 555 ++ R++L+YG L GT +P + Sbjct: 573 INQRLRLIYGRDCDFEIDGSLGQGTAFTVTLPFAKQ 608 >UniRef50_B9Y3V6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3V6_9FIRM Length = 571 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 70/273 (25%), Positives = 122/273 (44%), Gaps = 20/273 (7%) Query: 287 NNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEV 346 + A + L + G +I + S ++ + ++++ L+ Sbjct: 296 SRPLAQLCATMDQAGTGDLSIRAEERGGDEI-----ATLARSFNKLTAQIQRLMNQLLDQ 350 Query: 347 SRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIR-LNPDTARQLIFNLSRYLRYN 405 +A +AELR LQ++INPHFL+N L+ + N + QLI LS + R + Sbjct: 351 EKA------KRRAELRILQAQINPHFLYNTLDMLHWMAYDHNDEDMLQLISTLSSFYRIS 404 Query: 406 IELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPL-VENA 464 + + DE I + +EL ++ Y+ I++ RF ++ + E + L+ ENA Sbjct: 405 LN-RGDEFIPLPRELDHVRYYLEIQKMRFAEQFDFTIEASPETQSLLMLKLLLQPLAENA 463 Query: 465 IVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGN---KIGLL 521 + HGI+PC ++I G V I V D G G+D + + ++ G GL+ Sbjct: 464 VAHGIKPCPHPCTLSIQARRRGADVEIKVSDNGVGMDSETLGQLRRAFDTGKSSLGFGLV 523 Query: 522 NVHHRVKLLYGEGLHI---RRLEPGTEIAFYIP 551 NVH R++L YG+ + GT + IP Sbjct: 524 NVHQRIRLTYGKDYGLTLDSTSGQGTVVTVRIP 556 >UniRef50_UPI0001787F84 integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787F84 Length = 598 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 70/237 (29%), Positives = 115/237 (48%), Gaps = 14/237 (5%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSS 383 + M + Q+I E + E+ AL ++NPHFL+N LN I+ Sbjct: 366 HVLMKFNSMNEKVRQLIEENYVAKLRE------RETEILALGIQLNPHFLYNTLNIINWM 419 Query: 384 I-RLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIY 442 + +++ +LSR L Y + + D + +++ ++DYI I RF + V + Sbjct: 420 AVYGEKEQVSRMLVSLSRMLHYTTDNRKDSM-PLSEDIGWLQDYIVIMSNRFEHRFRVDF 478 Query: 443 DIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGID 501 DI+ E+ +P L +QPLVENAI+HG + + G++TI G+ + V D G G + Sbjct: 479 DIEPELMKARVPKLFLQPLVENAIIHGFRDMESGGLITIYGRSLGDDIEFCVEDNGCGFE 538 Query: 502 PKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRT 555 P+ ++ A IG+ NV R+KLLYG+ I E GT + IP+ + Sbjct: 539 PERLKEALAENAS--HIGIHNVDKRIKLLYGDRYGIGIESVPELGTRVKLVIPHHKA 593 >UniRef50_UPI0001C35C0F integral membrane sensor signal transduction histidine kinase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35C0F Length = 542 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 72/232 (31%), Positives = 117/232 (50%), Gaps = 14/232 (6%) Query: 327 SSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI-R 385 L EM+ + +I EV + E+ L ++NPHFL+N LN I+ + Sbjct: 314 EKLNEMSRNIKALIHENYEV------KLQQKDFEIMILTIQLNPHFLYNTLNIINWTCLA 367 Query: 386 LNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDID 445 + A ++I +LSR L+Y + + ++ ++ +K YI I Q R+ ++ V +DI Sbjct: 368 GDTPKASRMIVDLSRMLQYT-SQSRKQLVYLRDDIDWLKRYIEIMQIRYENQFEVNFDIP 426 Query: 446 EEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKV 504 EE+ +P L +QPLVENAIVHG + + KG++ IS + V D G G+ + Sbjct: 427 EELLGKEVPKLFLQPLVENAIVHGFKNSEEKGILEISAETDEENIYFTVEDNGVGMTQQR 486 Query: 505 IERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQ 553 ++ V G IG+ N R+K+LYG+ + +L GT + IP Q Sbjct: 487 VKEVLR--FTGTSIGVANTDRRIKILYGDAYGVSLHSQLGEGTAVVVTIPKQ 536 >UniRef50_C6D6B6 Putative sensor with HAMP domain n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D6B6_PAESJ Length = 595 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 76/268 (28%), Positives = 133/268 (49%), Gaps = 23/268 (8%) Query: 300 MLVIPLWEKGVVTGTLKIYYCHAH-----QITSSLQEMAVGLSQIISTQLEVSRAEQLRE 354 + ++ + V G LK+ + Q+ ++ M LS++ R + Sbjct: 328 LRMLRSLMRKVERGDLKVSFPVRQWDEVGQLGNAFNMMVSHLSEL------GYRLYETEI 381 Query: 355 MANKAELRALQSKINPHFLFNALNAISSSIRLNPD-TARQLIFNLSRYLRYNIELKDDEQ 413 AE+ ALQSKINPHFL+N L +IS + + + NLSR LRY++ + E Sbjct: 382 REKDAEIAALQSKINPHFLYNTLGSISMYAEVEGNREVVTMTNNLSRLLRYSLSGR-KET 440 Query: 414 IDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPC 472 + ++ EL +K Y+ I++ R+ D++ ++DE + C + L+IQP+VENAI HG+ Sbjct: 441 VTLRDELDHVKGYMTIQKMRYDDRIDFRLEVDESLYGCPVIPLMIQPIVENAINHGLDKG 500 Query: 473 KGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGN------KIGLLNVHHR 526 G+G + +S + + I + D G G+ + + + + GL+NVH R Sbjct: 501 IGEGRIQLSCYQEQGMLMIVIEDDGIGMTSEQLSAMRKRMDKIHDLGGTSGNGLMNVHRR 560 Query: 527 VKLLYGE--GLHIRRLE-PGTEIAFYIP 551 ++L YGE GL + + G ++ +P Sbjct: 561 IRLHYGEQYGLQLESMPFQGLKVILTMP 588 >UniRef50_C4ZBY3 Putative uncharacterized protein n=6 Tax=Clostridiales RepID=C4ZBY3_EUBR3 Length = 597 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 73/236 (30%), Positives = 127/236 (53%), Gaps = 11/236 (4%) Query: 326 TSSLQEMAVGLSQIISTQLEV-SRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 +S ++ + + E+ + + K+EL LQS+INPHFL+N L++I+ I Sbjct: 345 SSEIRHLGYSIRNSYKQNNELMKKIVWEQNERRKSELDVLQSQINPHFLYNTLDSITWMI 404 Query: 385 RLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 + A +I L++ R ++ K I ++ EL K Y+ I++ R+ +K V ++ Sbjct: 405 EGGKNEEASFMITQLAKLFRISLS-KGHTIIPVRDELLHAKSYMNIQKVRYKNKFEVSFE 463 Query: 444 IDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 +DEE+ + C L++QP++ENA+ +GI+ G + + + G + I V D G GI Sbjct: 464 VDEEIMDYCAVKLVLQPILENALNYGIRELDDFGEIVVGGQKVGEDIIITVSDNGMGIPE 523 Query: 503 KVIERVEAN----EMPGNKIGLLNVHHRVKLLYGE--GLHIRR-LEPGTEIAFYIP 551 I + N G+ +GL+NV++R+K+L+GE GLHI L+ GT + IP Sbjct: 524 NEIPFLLTNTDRVHKKGSGVGLVNVNNRIKILFGERYGLHIESELDEGTVVTIKIP 579 >UniRef50_A8SSH4 Putative uncharacterized protein n=8 Tax=Clostridiales RepID=A8SSH4_9FIRM Length = 635 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 74/253 (29%), Positives = 130/253 (51%), Gaps = 15/253 (5%) Query: 310 VVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKIN 369 GT IY + +I + QI E+ R + R K+E+ ALQS+IN Sbjct: 360 ETGGTTDIYIGGSSEIRHLGYSVKKSYEQIEVLMQEIIRQQNER---RKSEMDALQSQIN 416 Query: 370 PHFLFNALNAISSSIRLNPDT-ARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIA 428 PHFL+N L +I+ + N +T A +I L++ LR ++ K I I E+ Y+ Sbjct: 417 PHFLYNTLESITWMVEANRNTDAVFMISELAKLLRISLS-KGRTVIRIADEIQHSTSYMN 475 Query: 429 IEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKG--KGVVTISVAEC 485 I++ R+ ++ + IDEE+ + C L++QP++ENAI +G+ G +T+ + Sbjct: 476 IQKVRYKERFATEFIIDEEINDYCTVKLIVQPILENAIYYGVGNMDEDDGGKITVRGEKK 535 Query: 486 GNRVRIAVRDTGHGIDPKVIERVEANEMP----GNKIGLLNVHHRVKLLYGEGLHI---R 538 G+ + I+V D G G+ +V + + G+ +G++NVH R+KL++G + Sbjct: 536 GDDIYISVEDNGMGMTEEVARNILVDNNKVPKHGSGVGVINVHSRIKLMFGSEYGLKVYS 595 Query: 539 RLEPGTEIAFYIP 551 + GT++ +IP Sbjct: 596 EPDEGTKVVIHIP 608 >UniRef50_C5EUN5 Histidine kinase internal region n=4 Tax=Clostridiales RepID=C5EUN5_9FIRM Length = 587 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 72/255 (28%), Positives = 123/255 (48%), Gaps = 20/255 (7%) Query: 316 KIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFN 375 K + + + M + ++ E+S E + AEL AL S+INPHFL+N Sbjct: 338 KNSFYEVELLAGNYNRMIHRIRGLMD---EISEKE---KTLRHAELNALVSQINPHFLYN 391 Query: 376 ALNAISSSIRLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARF 434 L+ I N L +L+ + R ++ + I ++ EL ++ Y+ I++ R+ Sbjct: 392 TLDTIVWMAEFNDSSRVIALTKSLAAFFRLSLS-GGRKLITVEDELEHVRQYLYIQKERY 450 Query: 435 GDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAV 493 +KL + D + + +P +++QP+VEN+I HGI+P G G VTI+V E G R+ V Sbjct: 451 EEKLNYVIDAPGNLLDYTVPKIILQPIVENSIYHGIKPLNGPGQVTITVQEEGERLIFTV 510 Query: 494 RDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAF-- 548 D G G DP + + + +GL NV R+KL YG + G + Sbjct: 511 TDNGVGYDPAAVTADGSPRL--GSVGLKNVDERLKLYYGPEYGVTIRSAPGAGCRVRLMV 568 Query: 549 --YIPNQRTPVASQA 561 ++P+ +P+ S+ Sbjct: 569 GKHLPD--SPIHSEQ 581 >UniRef50_C6D353 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D353_PAESJ Length = 586 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 76/245 (31%), Positives = 126/245 (51%), Gaps = 14/245 (5%) Query: 316 KIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFN 375 + A Q+ + + M + ++I+ +QL E +ALQ++INPHFL+N Sbjct: 344 NLAKDEAGQLQRNFRMMVGRIDELINENY----VKQL--TIKDTEFKALQAQINPHFLYN 397 Query: 376 ALNAISSSIRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARF 434 L +I+ S ++ ++ +L LR I K + ++ EL + YIAI+ RF Sbjct: 398 TLESINWSAKIAGHKQISIMVESLGYLLRSTISHK-QPTVTLEDELRLVGHYIAIQHIRF 456 Query: 435 GDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAV 493 ++L I + +N +P L +QPLVENAI +G++ V+TI+ E + I V Sbjct: 457 EERLVFENRIPDRLLNMYVPKLSLQPLVENAIHYGLEQMIEACVITITAEEHEGGIAITV 516 Query: 494 RDTGHGIDPKVIERVEANEMP--GNKIGLLNVHHRVKLLYGEGLHIR---RLEPGTEIAF 548 D G G+ P VI+++ + E+ G IGL N+ R+K+L+GE IR + T I Sbjct: 517 ADNGPGLAPDVIDQLRSGEIEPRGTGIGLRNIEDRIKMLFGEAYGIRVESVPQQDTRITL 576 Query: 549 YIPNQ 553 Y+P + Sbjct: 577 YLPIE 581 >UniRef50_C5EHR4 Histidine kinase internal region n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHR4_9FIRM Length = 579 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 72/240 (30%), Positives = 129/240 (53%), Gaps = 14/240 (5%) Query: 319 YCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALN 378 Y + +++ L M + ++ Q + + EL LQ++INPHF++N L Sbjct: 344 YTEINILSNRLNAMLNRMRGLMEG------IRQKEKQKRRMELSFLQAQINPHFMYNTLF 397 Query: 379 AISSSIRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDK 437 +I + + + A +++ + + LR + +E + I++E ++ Y+ I++ R+ D Sbjct: 398 SIKCMVDMEKNEEASRMLVSFIQLLRSTLS-NPNEFVMIREEFQVLRQYVEIQKFRYDDG 456 Query: 438 LTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 VI++ DE V IP LLIQPL+ENAI HG++ KG+G++ I+ V + V D Sbjct: 457 FQVIFECDEGVEEKKIPKLLIQPLLENAIFHGVEFKKGEGLIIITARALDGGVAVTVEDN 516 Query: 497 GHGIDPKVIERVEANEMPGN--KIGLLNVHHRVKLLYGE--GLHIRRLE-PGTEIAFYIP 551 G GI P+ IE++ E G +G++NV R++L +G G+ I ++ GT+I +P Sbjct: 517 GMGIAPETIEKINRGERMGEKAHVGIVNVKERIQLNFGGNYGMKIESVQWEGTKIILNLP 576 >UniRef50_A6M2F5 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M2F5_CLOB8 Length = 589 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 69/257 (26%), Positives = 128/257 (49%), Gaps = 12/257 (4%) Query: 306 WEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIIST-QLEVSRAEQLREMANKAELRAL 364 + V G L++ H + +++A G + +I + + R ++ + + EL L Sbjct: 331 KMREVSMGNLEVRMEHDYD-GKDFRQLASGFNIMIEEINILMYRIKKEQSEIKQIELNRL 389 Query: 365 QSKINPHFLFNALNAISSSIRLNPDT-ARQLIFNLSRYLRYNIELKDDEQIDIKKELYQI 423 QS+I PHFL+N L I + + +++ L+ Y R + + + I I +EL + Sbjct: 390 QSQIKPHFLYNTLECIHWQALSDGNKDVSKMVKALANYYRLCLS-RGKDVIPISQELENV 448 Query: 424 KDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKG-KGVVTIS 481 ++Y+ I+ R+ ++DE N IP L +QPL+EN+I HGI+ G KG + ++ Sbjct: 449 ENYLIIQNMRYSGIAECEINVDENFKNVLIPKLTLQPLIENSIYHGIRVKDGYKGKILVT 508 Query: 482 VAECGNRVRIAVRDTGHGIDPKVIERVEANEM---PGNKIGLLNVHHRVKLLYGEGLHI- 537 E N++ I+V D G G+ + I+ + ++ GL NVH R+++L+G G + Sbjct: 509 AREINNKIVISVADNGVGMRQEQIDEINSSISVFDEKTGYGLRNVHKRIEILFGSGYGLY 568 Query: 538 --RRLEPGTEIAFYIPN 552 + GT + +P Sbjct: 569 YKKNEHGGTTVDIILPK 585 >UniRef50_UPI0001788487 integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788487 Length = 577 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 65/235 (27%), Positives = 124/235 (52%), Gaps = 14/235 (5%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 + + + M ++ +I+ R + + E +ALQ++INPHFL+N L +++ Sbjct: 350 LHRTFRLMIERINALITENYSN------RLLIKETEFKALQAQINPHFLYNTLESVNWLA 403 Query: 385 RLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 ++N ++ L+ LR ++ LK + + + +EL +++Y+ I++ RF D+L D Sbjct: 404 KMNKQSQISDMVQALAFLLRNSVSLK-EPILTLGEELEIVRNYVIIQKFRFEDRLHFTLD 462 Query: 444 IDE-EVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 + E +++ IP L +QPL+ENAI + ++P +T+S E + + V D G G+ P Sbjct: 463 VQEQDLHRKIPKLSLQPLLENAIHYALEPSVDPCRITLSCTETPSAFCVIVEDDGPGMAP 522 Query: 503 KVIERVEANE--MPGNKIGLLNVHHRVKLLYGEGLHIRRLEP---GTEIAFYIPN 552 + R+ + + GN IGLLN+ R+KL +G+ + GT + +P Sbjct: 523 DTLTRLRSGDLATSGNGIGLLNIEERIKLAFGDHYGLSIDSGPGLGTRVILSLPK 577 >UniRef50_C0D041 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D041_9CLOT Length = 564 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 72/260 (27%), Positives = 125/260 (48%), Gaps = 21/260 (8%) Query: 308 KGVVTGTLKIYYCHAHQ-----ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELR 362 + G L+I+ + +T S M Q + R+ + N+ +LR Sbjct: 309 GEIKKGNLEIHMETDREDELGRLTESFNRMTEEYRQ------NLVRSVARQRELNETQLR 362 Query: 363 ALQSKINPHFLFNALNAISSS-IRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELY 421 +Q+++NPHFL+N L+++ + + L +L+ LR I E I ++ EL Sbjct: 363 MMQAQLNPHFLYNTLDSMKWLGVTHHVPQVATLATDLAVILRAGIS--GSEFITLEDELE 420 Query: 422 QIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTI 480 + YI I+ RF D+ T D+ + + C +P L++QPLVENAI+HG+ + G + + Sbjct: 421 LVDRYIDIQSLRFEDRFTCEIDVPDRLQSCLVPKLVLQPLVENAIIHGVVDRED-GYIKL 479 Query: 481 SVAECGNRVRIAVRDTGHGIDPKVIERVEANEM--PGNKIGLLNVHHRVKLLYGEGLHIR 538 E + ++V D G GI P V+ R+ + + PG +GL NV ++L +GE I Sbjct: 480 QAEEQEGDLLLSVYDNGCGIPPDVLARLNSKDQKIPGEHLGLFNVSSIIRLHFGEKYGIS 539 Query: 539 ---RLEPGTEIAFYIPNQRT 555 G+ + +P Q+ Sbjct: 540 AETTPGDGSCVRLLLPIQKK 559 >UniRef50_C8XT87 Putative periplasmic sensor signal transduction histidine kinase n=1 Tax=uncultured bacterium RM57 RepID=C8XT87_9BACT Length = 452 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 117/211 (55%), Gaps = 7/211 (3%) Query: 347 SRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNI 406 + E+ + +A L AL+ +INPHFLFN LN+I+S +R P+ AR++I L LR + Sbjct: 223 QKFEEQSRLLLEARLDALRRQINPHFLFNTLNSIASLVRSQPELAREMIVKLGNILR-TL 281 Query: 407 ELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAI 465 D + + +EL DY+ IE RFG KL V+ +I E+ ++ +PS+L+QPL+EN+I Sbjct: 282 LRDHDAFVPLGEELAFTDDYLDIEVVRFGSKLRVVKEIAEDTLDMEVPSMLLQPLIENSI 341 Query: 466 VHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVI--ERVEANEMPGNKIGLLNV 523 HG++P G VT+ ++ I V D G G +P + G IG+ NV Sbjct: 342 KHGLEPRISGGTVTLRSRAAQGQLIIEVEDDGVGAEPGRAVTAPMSGLVREGTGIGMRNV 401 Query: 524 HHRVKLLYGEGLHIR---RLEPGTEIAFYIP 551 R+++LYG+ + R GT++ IP Sbjct: 402 RERMQVLYGDAAEVEMVSRPGRGTKVRLVIP 432 >UniRef50_C6J4K8 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J4K8_9BACL Length = 590 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 73/247 (29%), Positives = 131/247 (53%), Gaps = 20/247 (8%) Query: 319 YCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALN 378 Y + + +S M + ++I R + AEL ALQS++NPHFL+N L+ Sbjct: 341 YQEINILVASFNRMVSRIEELI------ERVKISSVSEKNAELHALQSQVNPHFLYNTLD 394 Query: 379 AISSSI-RLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDK 437 I + D +L+ +LS RY+ E KD ++ +++EL QI Y+ I R + Sbjct: 395 MIYWMLDEKENDRLGELVLSLSSMFRYSSEWKDGAKVTLREELEQINHYLTIILIRLEGR 454 Query: 438 LTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 L V IDE ++ +P + +QP++ENA+ +G++ K +GV+ + E G+ ++I V D Sbjct: 455 LRVEKSIDERWLDIRLPKMTVQPIIENAVKYGLESLKRQGVLKLYTQEVGDVLKIVVEDN 514 Query: 497 GHGIDPKVIERVEA---------NEMPGNKIGLLNVHHRVKLLYGE--GLHIRRL-EPGT 544 G+G+ + + ++ + + IGL N+H R++ ++GE GL I + + GT Sbjct: 515 GNGMTAERLAWLKQSINCPIPKVSGTGSSGIGLQNLHRRLQHMFGERYGLEIESIPDQGT 574 Query: 545 EIAFYIP 551 ++A +P Sbjct: 575 KVAVVLP 581 >UniRef50_C7GCG8 Putative two-component sensor histidine kinase n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GCG8_9FIRM Length = 592 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 71/273 (26%), Positives = 129/273 (47%), Gaps = 18/273 (6%) Query: 296 EIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQL-EVSRAEQLRE 354 ++H + G +I + L+ M + ++++ + E + EQ+ Sbjct: 326 QMHKAATGDFDITEDIGGEDEI-----SDLYRDLKVMIDSIQELMNNVIKERVQKEQVNA 380 Query: 355 MANKAELRALQSKINPHFLFNALNAISSSIRL-NPDTARQLIFNLSRYLRYNIELKDDEQ 413 + E + L S+INPHFL+N L I R+ N +L L++ +R NI++ + Sbjct: 381 RQKEVEFKMLASQINPHFLYNTLETIRMQARIHNQPDIEELAKMLAKIMRRNIQVS-NTL 439 Query: 414 IDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPC 472 +K EL ++ Y+ I+ RF D++ + + ++ + LLIQP VENA VHG++ Sbjct: 440 QPLKSELKLVEYYLKIQDYRFHDRIHYRIETEGDIEPLKVMPLLIQPFVENAFVHGLEAK 499 Query: 473 KGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN-----EMPGNKIGLLNVHHRV 527 + G + I V E + + I V D G G+ + ++ V + IG+ NV+ R+ Sbjct: 500 ESGGEIVIRV-EVRSHLWITVTDNGCGMSMEKLDEVRRGLNDFENLDRTHIGICNVNQRI 558 Query: 528 KLLYGEGLHIR---RLEPGTEIAFYIPNQRTPV 557 KL YGE + R GT++ +P + + Sbjct: 559 KLQYGEDYGVEFESRTGAGTKVCIKLPVLTSEI 591 >UniRef50_B9Y686 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y686_9FIRM Length = 579 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 125/276 (45%), Gaps = 21/276 (7%) Query: 297 IHSMLVIPLWEKGVVTGTLKIYYCHAH------QITSSLQEMAVGLSQIISTQLEVSRAE 350 + + + K V GTL YY + S M + +I + Sbjct: 310 LKPIRALQGRMKKVEEGTLDAYYTLPGTHDEIDSLGQSYNAMLDEIISLID------KIY 363 Query: 351 QLREMANKAELRALQSKINPHFLFNALNAISSSIR-LNPDTARQLIFNLSRYLRYNIELK 409 Q + +AEL+ LQ++I PHFL+N L+ + + D + I +LS Y R + Sbjct: 364 QEQAEKRQAELKVLQAQIKPHFLYNTLDNLKWMAKAQGADEVAKAITSLSTYFRIFLS-N 422 Query: 410 DDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHG 468 E+I + +E + Y+ +++ R+G KL ++ E+ + + +LIQPLVENAI HG Sbjct: 423 GQEKITLAQEFKHTEAYLTMQKIRYGQKLNSTLELAEDARDLPMLKILIQPLVENAINHG 482 Query: 469 IQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEA---NEMPGNKIGLLNVHH 525 ++P + G + +S +R+ I VRD G G+D + + E GL NV Sbjct: 483 LKPKENGGTIQVSARLIEDRLEIQVRDDGVGMDEATLAALREALQKEQMEGHYGLQNVLR 542 Query: 526 RVKLLYGE--GLHIRR-LEPGTEIAFYIPNQRTPVA 558 R ++ YGE L I L GT + +P + Sbjct: 543 RCRIEYGEKACLSIDSTLGAGTCVTLTLPVSGKEES 578 >UniRef50_A5ZVI8 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZVI8_9FIRM Length = 478 Score = 238 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 71/243 (29%), Positives = 123/243 (50%), Gaps = 14/243 (5%) Query: 323 HQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISS 382 ++ + +MA +S ++ Q +EM + EL+ +Q+++NPHFL+N L+ I Sbjct: 243 EELDQGINKMAHRISGLLENV------RQEKEMQHLTELQLIQAQVNPHFLYNTLDTIVW 296 Query: 383 SIRLN-PDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVI 441 I D A ++I +LS + R ++ K ++ I + +E Y+ I+Q R+ D L Sbjct: 297 LIEGGMTDDAVEMISSLSIFFRTSLS-KGNDIIPLSEEKRHTLSYLEIQQFRYRDILEFE 355 Query: 442 YDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGI 500 I +E++ +P L IQPL ENA+ HGI+ +GKG +TI+ E + + + V D G G+ Sbjct: 356 LSIPKELDGIQVPKLSIQPLAENALYHGIKNRRGKGKITITGREEADAIVLTVSDNGQGM 415 Query: 501 DPKVIERVEANEMPGN--KIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRT 555 P+ + V+ + G GL V R+ L YG G + + GT + + Sbjct: 416 TPERLHEVQESIRTGERAGFGLAAVAERIALYYGPGYGMTISSKEGEGTTVELRLGKNIQ 475 Query: 556 PVA 558 P + Sbjct: 476 PKS 478 >UniRef50_C2L0L8 Possible two-component sensor kinase YesM n=1 Tax=Oribacterium sinus F0268 RepID=C2L0L8_9FIRM Length = 648 Score = 238 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 67/274 (24%), Positives = 133/274 (48%), Gaps = 27/274 (9%) Query: 304 PLWEKGVVTGTLKIYYCHAHQITS----SLQEMAVGLSQIISTQLEVSRAE-QLREMANK 358 P+ + G + + +I+S + + L Q + E++ + +E + Sbjct: 342 PIRKLNEDLGNMGVKRPTMEEISSYGSTEIVHLGESLLQSLQRIDELTEERIRQQEEKRQ 401 Query: 359 AELRALQSKINPHFLFNALNAISSSIRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIK 417 +E+ ALQS+INPHFL+N L ++ I + A ++ L+ + R ++ I + Sbjct: 402 SEMDALQSQINPHFLYNTLESVVWMIESGKREDAVFMVTQLASFFRISLSA-GKNIIPLS 460 Query: 418 KELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKG 476 +E+ K+Y+ I++ RF +K TV +D++EE ++C L++QP++ENAI HG++ G Sbjct: 461 QEIQHAKNYMNIQKIRFKNKFTVDFDVEEEVLSCLTVKLILQPILENAIYHGMEGMDEDG 520 Query: 477 VVTISVAECGNR-----VRIAVRDTGHGIDPKVIERV-----------EANEMPGNKIGL 520 + +S V ++V+D G G+ + + + G+ +G+ Sbjct: 521 EILVSGRIQEEEDGRRSVLLSVKDNGFGMTEDKARALLEKTESDYSSFSSQKKRGSGVGV 580 Query: 521 LNVHHRVKLLYGEGLH---IRRLEPGTEIAFYIP 551 +NVH R++L +G I + GT++ +P Sbjct: 581 INVHRRIQLRFGSIYGLRVISAPDEGTDVQVLLP 614 >UniRef50_C5RJD6 Sensor protein n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJD6_CLOCL Length = 1028 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 76/218 (34%), Positives = 128/218 (58%), Gaps = 2/218 (0%) Query: 335 GLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQL 394 + ++++ ++ ++ A E+ LQ++I PHFLFN +N I + NP+ A +L Sbjct: 811 EVDELLARTKTLTELKKSVIKAFDMEMAFLQAQIKPHFLFNVINTIVALCDDNPEEASEL 870 Query: 395 IFNLSRYLRYNIELKDDEQ-IDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIP 453 + S YLR + + ++ EQ I ++KE+ + Y+ +E+ARFG+KLT+ +DID+ + IP Sbjct: 871 LIEFSSYLRSSFDFRNLEQAIALEKEIEYVNSYLKLEKARFGEKLTIEFDIDDSIKAKIP 930 Query: 454 SLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEM 513 L+IQPLVENA+ HG+ G V +S+ E + ++V+D G GI +++ + N+ Sbjct: 931 PLVIQPLVENAVKHGVMKKSEGGTVRLSIKETNGEINVSVKDDGVGISKDILQGILKNDS 990 Query: 514 PGNKIGLLNVHHRVKLLYGEGLHIRRLE-PGTEIAFYI 550 +G+ N+ R+K + G GL I E GTEI F I Sbjct: 991 KRRSVGVKNIDKRLKRISGRGLQINSNEGEGTEIQFSI 1028 Score = 50.1 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 38/173 (21%), Positives = 73/173 (42%), Gaps = 39/173 (22%) Query: 390 TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN 449 A++LIF++ Y +K ++Q+ I+ ++IE +KL I +DE+ Sbjct: 526 DAKKLIFSVVNIFEY---IKPNKQVRIE---------LSIE-----EKLPFIL-VDEDRF 567 Query: 450 CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVE 509 I + ++ NA+ KG + +S N V I + DTG GI ++++ Sbjct: 568 NQI----LFNIIGNAMKF-----THKGKIAVSTERIDNFVEIRIEDTGIGISEDKLDQIW 618 Query: 510 A----------NEMPGNKIGLLNVHHRVKLLYGEGLHIRR-LEPGTEIAFYIP 551 + G +GL + + L+G +++ + GT F +P Sbjct: 619 NAFEQIDASITRKYGGMGLGLSITKN-LVELHGGSINVESQINKGTIFRFTVP 670 >UniRef50_A7VVZ0 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVZ0_9CLOT Length = 599 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 71/239 (29%), Positives = 119/239 (49%), Gaps = 19/239 (7%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISS-S 383 I+ + EM L+ IS AEL ALQ++I+PHFL+N L++I + + Sbjct: 352 ISQAFNEMCERLNSYISEVYAA------EIQRKNAELNALQTQIDPHFLYNTLDSIRAKA 405 Query: 384 IRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 + + ++I L + LR++ D+ I ++ EL I Y+ +++ R+ ++L V Sbjct: 406 LAAQDEDTGEMIVLLGKLLRWS-SGTTDKFITLEDELEYIDTYLRLQKYRYEERLEVNIQ 464 Query: 444 IDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAE-CGNRVRIAVRDTGHGID 501 I +E ++ IP L++QPLVEN I H + KG + I +E G R+ I + D G GI+ Sbjct: 465 IPDEYLDDFIPKLILQPLVENVIKHAFADKEDKGFIGIVASEKEGKRLEITIFDNGKGIE 524 Query: 502 PKVIERV------EANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIP 551 ++ + + + IGL NV R+KLL+GE + GT + P Sbjct: 525 KDTLQEICEKLNQQVLQDEFKSIGLQNVQARLKLLFGEEYGLMIKSTAGIGTAVKVTFP 583 >UniRef50_A8FI26 Sensor histidine kinase n=2 Tax=Bacillus pumilus RepID=A8FI26_BACP2 Length = 424 Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats. Identities = 79/247 (31%), Positives = 130/247 (52%), Gaps = 19/247 (7%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 + + Q M + +I E+ + L + +L+ LQ+++NPHFLFN LN +S Sbjct: 180 LNEAFQRMRQEMKMMIE---EMKQKAALDQKIKDMKLKTLQNQMNPHFLFNTLNIVSRMA 236 Query: 385 RLN-PDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 L D +LI ++S +RY++ + +++E+ +K+Y I++ RF D++T Sbjct: 237 YLESADATSRLIQSVSTLMRYSLSALSAS-VTLEQEVKVVKEYFHIQETRFADRITCKTT 295 Query: 444 IDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 IDE ++ IPSL +QPLVENA +HG++P + G+V +S+ + G V I +RD G GI+ Sbjct: 296 IDESCLSVLIPSLTLQPLVENAFIHGVEPKEEDGLVELSIYQEGGYVMIRIRDNGVGINE 355 Query: 503 KVIERVEANEMP----------GNKIGLLNVHHRVKLLYG--EGLHI-RRLEPGTEIAFY 549 + R+ + + IGL NV R++L YG L I + GT I Sbjct: 356 QERRRLLSEKDEEDPNILSKGHSTGIGLRNVISRLRLFYGVQNALQIDSKPNEGTTIQLA 415 Query: 550 IPNQRTP 556 IP + P Sbjct: 416 IPMKEGP 422 >UniRef50_B0K3C6 Histidine kinase n=4 Tax=Thermoanaerobacter RepID=B0K3C6_THEPX Length = 414 Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats. Identities = 76/246 (30%), Positives = 133/246 (54%), Gaps = 14/246 (5%) Query: 325 ITSSLQEMAVGLSQIISTQL--EVSRAEQLREMANKAELRALQSKINPHFLFNALNAISS 382 I S L E+ GL++++ +L E R + + EL+ LQS++NPHFLFN LN + Sbjct: 163 IASYLIEL--GLNKLMQEKLLEETKRRSEYENIIKSLELKTLQSQVNPHFLFNTLNTAAR 220 Query: 383 SIRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVI 441 L N ++I++L+ LRY++ D+ + +K+E+ +K Y+ I++ R+ D + Sbjct: 221 LAYLENAPRTAEIIYSLASLLRYSLR-NLDQLVALKEEISYLKHYLHIQEIRYKDHIKSQ 279 Query: 442 YDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGI 500 D+ E+ N +P + +QP+VENAI+HG++ + GV+ I + + I V+D G GI Sbjct: 280 IDVPTEIENVLLPVMSLQPIVENAIIHGLEEKEEGGVINIKAYQKDETIFIEVKDNGVGI 339 Query: 501 DPKVIERVEANEMPGNK----IGLLNVHHRVKLLYGEGLHIR---RLEPGTEIAFYIPNQ 553 D K++E ++ + G +GL NV R+K+ +G+ + GT + IP Sbjct: 340 DKKMLEVIKNDIEKGKGHTTALGLQNVDRRIKMYFGKEYGLEIRSEKGNGTLVVLKIPII 399 Query: 554 RTPVAS 559 + V Sbjct: 400 KKEVGK 405 >UniRef50_A4XJ72 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XJ72_CALS8 Length = 583 Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats. Identities = 79/238 (33%), Positives = 128/238 (53%), Gaps = 9/238 (3%) Query: 324 QITSSLQEMAVGLSQIISTQLEVS-RAEQLREMANKAELRALQSKINPHFLFNALNAISS 382 Q+T +++ MA + +I + +Q+ + + L S+INPHFLFN L AI Sbjct: 347 QLTENIKTMAKNIKNLIDQVYLAEVQKQQIIAKQREIQFEMLCSQINPHFLFNTLEAIRM 406 Query: 383 SIR-LNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVI 441 Q+++ LS LR +IE+ D I ++KE+ +K+++ I++ RFGDK+ Sbjct: 407 KAFCTGQYEIAQVVYLLSNLLRKSIEMTID-LITLEKEVEIVKEFLEIQKFRFGDKIYYK 465 Query: 442 YDI-DEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGI 500 ++ D+ ++ + +IQPLVEN+I HGI+P GKG + I V + ++I V D G G+ Sbjct: 466 IEVQDDLLSSKVLPFIIQPLVENSIRHGIEPIIGKGTIEIKVFKKDGTIKIIVTDNGAGM 525 Query: 501 DPKVIERVEA--NEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQ 553 + +E V + + +GL NV HR+KL YGE I L GT + IP + Sbjct: 526 PKEKLEEVLQSLDSKDKSHVGLKNVFHRLKLFYGEEAKIFINSELGKGTSVEIQIPKR 583 >UniRef50_UPI0001B9EDED integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9EDED Length = 613 Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats. Identities = 71/250 (28%), Positives = 113/250 (45%), Gaps = 21/250 (8%) Query: 323 HQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISS 382 QI+ +M L Q I AEL ALQS+INPHFL+N L +I Sbjct: 372 QQISRRFNDMGDRLEQYIDKMY------TSEIKQKNAELVALQSQINPHFLYNTLESIRM 425 Query: 383 SIR-LNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVI 441 + Q+I++LS + +K + +++E+ Y+ + + R+ +L Sbjct: 426 KAYFVGAKEVGQMIYSLSVMFKN--MVKKSTMVTVEEEIDMCSVYLDLFRIRYEGRLETE 483 Query: 442 YDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGI 500 ++D E+ N I LL+QP+VEN IVHG +P + +++ +RV I V D G GI Sbjct: 484 IEVDPEIQNLSIIKLLVQPIVENYIVHGFRPLEDNNKISVRAHGTEDRVVITVSDNGTGI 543 Query: 501 DPKVIERV--------EANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFY 549 + ++ + + IGL+NVH R+ L YG + GTE+ Sbjct: 544 PEDKLIQIRQTLDKVLQPPDKGYRSIGLMNVHERIVLNYGSDYGVTICSTEGRGTEVRME 603 Query: 550 IPNQRTPVAS 559 IP R + Sbjct: 604 IPKLRKGETT 613 >UniRef50_A7VR10 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VR10_9CLOT Length = 563 Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats. Identities = 71/246 (28%), Positives = 133/246 (54%), Gaps = 17/246 (6%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 I S+++M++ QI Q + +A+ ALQS+INPHFL N L++IS + Sbjct: 325 ILDSIRKMSLKNEQI------TEELSQRVALLKQAQAVALQSQINPHFLHNTLDSISWTA 378 Query: 385 ---RLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVI 441 + A ++ L++ LRY+++ D + ++KEL + Y+ +++ R+ + V Sbjct: 379 IRLTGGKNKASVMLTKLAQILRYSLD-DVDTLVPLRKELENTRIYLELQELRYNNCFCVE 437 Query: 442 YDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGI 500 +DI+E ++ + +++QP+VENAI HGI+P G++ IS G+ ++I++RD G GI Sbjct: 438 WDIEETILDIHVIKIILQPIVENAIQHGIKPLGKDGLIHISAKPQGSFLQISIRDNGVGI 497 Query: 501 DPKVIERVEANEMP-----GNKIGLLNVHHRVKLLYGEGLHIR-RLEPGTEIAFYIPNQR 554 + + ++ IG++NVH R++L YG+ + E GT + +P + Sbjct: 498 PAERLSAIQNALQSDMIKQNEGIGIVNVHQRIQLFYGKEYGVSISSENGTCVTMNLPLLK 557 Query: 555 TPVASQ 560 ++ Q Sbjct: 558 GSISQQ 563 >UniRef50_A9QDR5 Putative sensor with HAMP domain n=1 Tax=Paenibacillus sp. JDR-2 RepID=A9QDR5_PAESJ Length = 572 Score = 237 bits (606), Expect = 8e-61, Method: Composition-based stats. Identities = 64/238 (26%), Positives = 118/238 (49%), Gaps = 11/238 (4%) Query: 324 QITSSLQEMAVGLSQIISTQLEVS-RAEQLREMANKAELRALQSKINPHFLFNALNAISS 382 Q+T M + +I+ + + + L +A+L AL S+INPHFLFN+L I Sbjct: 330 QLTGEFNRMTERIDNLITDVYQADIQKKDLEIRQRQAQLHALHSQINPHFLFNSLETIRM 389 Query: 383 -SIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVI 441 S+ + I +++ R +I K + I++E+ + ++ I++ RFGDKL Sbjct: 390 RSLMKGETETAKTIHYMAKIFRKSISWK-RSWVSIREEIELTECFLEIQKYRFGDKLQYQ 448 Query: 442 YDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGI 500 +++ V + IP + P VENA +HGI+ G G++ I + GN++ + D G G+ Sbjct: 449 ITVEDTVYDQMIPKMTFLPFVENASIHGIESSPGIGLIQIHIGIAGNKLMFRLSDNGIGM 508 Query: 501 DP----KVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIP 551 +++ + ++ G+ +G+ NV+ R+KL Y + GT + +P Sbjct: 509 SQAKLSELLNYLRLDDSIGDNVGMKNVYTRLKLCYKDSFEFDIASEEGHGTTVELRLP 566 >UniRef50_D0MDS0 Signal transduction histidine kinase, LytS n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MDS0_RHOM4 Length = 831 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 98/410 (23%), Positives = 180/410 (43%), Gaps = 41/410 (10%) Query: 178 ILGSVCIGFIVLLVQSVEG--EKEASAARQAKLALDIANKTLPLFRH-----VNSES-LR 229 ++G + + +++ + + +E A + + L F+ + E+ R Sbjct: 415 VVGGLYVVLLLVFFERLAHWLRRELPAFFSTER--QRTRQLLSHFQEQMTQLFSFEALAR 472 Query: 230 KVCEIIRDDIHADAVAITNT-DHVLAYVGVGEHNYQNGDDFISPTTRQAM-----NYGKI 283 + E++ + +V I D L + Y +++ +A+ G+I Sbjct: 473 RTVEVVAEAFRVRSVRIFFRPDESLPWFSAA---YHPEPPYLTERIVEAIWPHFREEGRI 529 Query: 284 IIKNND--EAHRTPEI-------HSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEM-- 332 +N + EA E+ H LVIP+ + G L + +L+++ Sbjct: 530 WARNPELSEARLPQELQALLESRHVALVIPIIAEQRPLGLLALGPRRNRHEFYNLEDLDL 589 Query: 333 ----AVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNP 388 L+ I V R L +A+L AL+++INPHFLFNALN I++ I +P Sbjct: 590 LRMLGGQLALAIERLYLVERERALIRQNAEAQLVALRAQINPHFLFNALNTIAALINEHP 649 Query: 389 DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV 448 + A ++ +L+ R+ + + + +EL ++ Y+ IE+ARFG+KL+V + E+ Sbjct: 650 EKAEAVVEHLAAIFRHTLNTGGRSFVSLDEELQLVRHYLEIERARFGEKLSVAIEWPAEL 709 Query: 449 N-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVR-IAVRDTGHGID--PKV 504 + +P+ +Q L ENA+ HG++ + G V I + + I V DTG GI + Sbjct: 710 SAFPVPAFAVQTLAENAVKHGLEKLRTGGAVQIRARRLEDGLVEILVADTGAGIPWLWEQ 769 Query: 505 IERVEANEMPGNKIGLLNVHHRVKLLYGEG--LHIRR-LEPGTEIAFYIP 551 + +P +GL NV R++ LYG L GT + +P Sbjct: 770 NGQPGEGPLPFFGLGLRNVMARLEQLYGRRDLLRFESAPGQGTRVRLLLP 819 >UniRef50_B7GJK8 Signal transduction histidine kinase n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GJK8_ANOFW Length = 479 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 80/246 (32%), Positives = 128/246 (52%), Gaps = 15/246 (6%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 + + Q M L +IS +E+ E+L + EL+ALQS+INPHFLFN LN IS Sbjct: 235 LGQTFQHMIENLRILISKNMEILEKEKL---VRELELKALQSQINPHFLFNTLNVISKLA 291 Query: 385 RLN-PDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 + + +L + S LRYN+ K D+ + +++E+ K+Y AI++ARF D++T Sbjct: 292 YIEGAEQTSELTVSTSNLLRYNLR-KLDQPVTLREEVEHAKEYFAIQKARFRDRVTFEVK 350 Query: 444 IDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 +DE + IP L +QPL+ENA +HGI+ + + + + E N ++I + D G G+ Sbjct: 351 VDESCLEQPIPCLTLQPLIENAFIHGIEGMEEGANIQLIIEEKRNCIQITIADNGVGMPY 410 Query: 503 KVIERVE------ANEMPGNKIGLLNVHHRVKLLYG--EGLHIRR-LEPGTEIAFYIPNQ 553 V + +GL NV R++L YG + L I+ GT I +P + Sbjct: 411 DVQRAIMDASYSLTKTGHSTGLGLENVLRRLQLFYGVEKILEIKSAPNEGTAIILRLPRR 470 Query: 554 RTPVAS 559 V + Sbjct: 471 ERDVQA 476 >UniRef50_C5RG15 Putative sensor with HAMP domain n=1 Tax=Clostridium cellulovorans 743B RepID=C5RG15_CLOCL Length = 599 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 69/243 (28%), Positives = 124/243 (51%), Gaps = 18/243 (7%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSS 383 Q+ S+ +M + ++I V + Q + ELR LQ++INPHF++N L +I Sbjct: 363 QLVSTFNDMTTKIEELIEETY-VDKLNQ-----KELELRMLQNQINPHFIYNTLESIRMM 416 Query: 384 IRLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIY 442 +N D A ++ L + +RY + K + + + +E+ IK Y+ +++ RF + +I+ Sbjct: 417 CEINDDIEASEMTMALGKIMRYGLSNKL-KYVTVAQEIDNIKTYVKLQEYRFDNFEELIF 475 Query: 443 DIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGN--RVRIAVRDTGHG 499 DID + + I L+ QP+VENA+ HG+ + G++ IS + + ++D G G Sbjct: 476 DIDPSLYDNEIVKLIFQPIVENAVYHGLSTLETGGIIIISGYKDTENCDIIFTIKDNGIG 535 Query: 500 IDPKVI----ERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPN 552 +D + + + N IGL NV+ R+KL YGE I + GT + +P Sbjct: 536 MDKDTLSLLNDYINERNESFNSIGLRNVNMRIKLSYGEKYGITIYSDINEGTTVKIIVPE 595 Query: 553 QRT 555 ++ Sbjct: 596 IKS 598 >UniRef50_Q1JFY4 Two-component sensor kinase yesM n=47 Tax=Streptococcus RepID=Q1JFY4_STRPD Length = 577 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 13/234 (5%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSS 383 + + + ++ + +A + L+AL S+INPHFL+N L+ I Sbjct: 339 DLAQQFNALLDQIDSLMVAVADKEKA------IGQYRLQALASQINPHFLYNTLDTIIWM 392 Query: 384 IRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIY 442 N ++ +L++Y R + + +E I + EL + Y+ I++ R+GDKL+ Sbjct: 393 AEFNDSKRVVEVTKSLAKYFRLALN-QGNEYIRLADELDHVSQYLFIQKQRYGDKLSYEV 451 Query: 443 D-IDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGID 501 +D + IP L++QPLVENAI HGI+ KG++ ++V++ + + V D G GI+ Sbjct: 452 QGLDVYADFVIPKLILQPLVENAIYHGIKEVDRKGMIKVTVSDTAQHLVLTVWDNGKGIE 511 Query: 502 PKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPN 552 + ++ G +GL NV R+KL YG+G H+ + + TEI +P Sbjct: 512 DSSLTNSQSLLARG-GVGLKNVDQRLKLHYGKGYHMTIHSQSDHFTEIQLSLPK 564 >UniRef50_B6FKZ9 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FKZ9_9CLOT Length = 468 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 69/243 (28%), Positives = 120/243 (49%), Gaps = 21/243 (8%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 + + +M + ++ E + L E + LQ +INPHFL+N L+ I Sbjct: 230 LMDNFNDMTKEIGNLVVDIKEKEKNLHL------METKLLQEQINPHFLYNTLDTIVWLA 283 Query: 385 RLN-PDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 N + A ++ +LS + R + + + I +++E I Y+ I+Q R+ D + Sbjct: 284 EDNRNEEAVAMVTSLSDFFRTTL-CQGRDYITVREEEAHIISYLKIQQFRYQDIMDYEIQ 342 Query: 444 IDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 I+EE+ IP LL+QPLVENA+ HG++ +GK ++ + + ++ V D G G+ Sbjct: 343 IEEEMKKFVIPKLLLQPLVENALYHGVKKKRGKSLIRVKGFQKDEKLIFQVIDNGKGMSA 402 Query: 503 KVIERVEANEMPG------NKIGLLNVHHRVKLLYGE--GLHIRRLE-PGTEIAFYIPNQ 553 + + + N G GL NV+ R++ YGE GL+I E GT +I ++ Sbjct: 403 EELNTLRENVQKGPDERKNKGFGLANVNQRIRHYYGETYGLYIESTENEGT---VHISDK 459 Query: 554 RTP 556 R+P Sbjct: 460 RSP 462 >UniRef50_A4XMX5 Integral membrane sensor signal transduction histidine kinase n=2 Tax=Clostridia RepID=A4XMX5_CALS8 Length = 613 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 10/239 (4%) Query: 324 QITSSLQEMAVGLSQIISTQ-LEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISS 382 + M + L ++I + L + + L +AEL ALQS+INPHFLFN L++I Sbjct: 368 NVIKEFNNMTIKLKELIEKEMLSEIQRKTLEIEKKQAELNALQSQINPHFLFNTLDSIRM 427 Query: 383 -SIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVI 441 S+ N ++I L+R LR I ++ +++E+ ++D++ I++ R G+KL Sbjct: 428 RSVLKNELETAEIIKYLTRTLRRLIYW-GNDITTVEEEIGFVEDFLKIQKYRLGEKLAYR 486 Query: 442 YDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGI 500 +DE NC IP + IQPLVENA +HGI+ +G G + I V + + I V D G G+ Sbjct: 487 IYVDEVARNCLIPKMTIQPLVENACIHGIEEIEGNGEIIIEVKKEEAYLIIKVEDNGIGM 546 Query: 501 DPKVIERV---EANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQ 553 D + + ++ +N IGL NV+ R+ L Y + + GT + IP + Sbjct: 547 DEEKLSQLYENLSNNTYEKNIGLKNVYKRLMLYYNNAVDFKIHSNFKQGTRVVIKIPLE 605 >UniRef50_C0Z9Z8 Sensor protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z9Z8_BREBN Length = 1024 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 73/200 (36%), Positives = 113/200 (56%), Gaps = 5/200 (2%) Query: 358 KAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDE-QIDI 416 + E LQS+I PHFLFNALN+I++ + + L+ S YLR + + + E I + Sbjct: 825 RMEGAWLQSQIEPHFLFNALNSIAALGLQDFTKMQTLLEEFSNYLRLSFDFHNSEPVISL 884 Query: 417 KKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKG 476 EL ++ Y+ IE+ RFGD+L V +D+D +++ C+P L IQPLVENAI HG+ G Sbjct: 885 HDELDLVRSYLYIEKQRFGDRLQVEWDLDPDLDFCLPPLSIQPLVENAIKHGLMQRTSGG 944 Query: 477 VVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGN---KIGLLNVHHRVKLLYGE 533 V I + + I+++D G GI + + ++ + G +GL N+ R++ LY + Sbjct: 945 TVWIHIKDNEEYFEISIQDDGEGIAEEDLNQLFSQTRHGKKRASVGLRNIERRLRQLYNQ 1004 Query: 534 GLHI-RRLEPGTEIAFYIPN 552 GL I E GT + F IP Sbjct: 1005 GLTINSSPEQGTIVTFGIPK 1024 Score = 51.3 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 17/114 (14%) Query: 460 LVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEA--------- 510 LV NAI +G +TI +I V DTG G++ K ++ + Sbjct: 556 LVHNAIKF-----TDEGTITIRATTSNGFAQIQVEDTGVGVEEKALQTIFQPYEQAELNA 610 Query: 511 -NEMPGNKIGLLNVHHRVKLLYGEGLHIRR-LEPGTEIAFYIPNQRTPVASQAT 562 G +GL + ++ L+G L ++ L G+ F +P V + Sbjct: 611 IRASGGFGLGLH-ISKQLVELHGGTLSVQSTLGKGSAFTFTLPLASDSVLIEEN 663 >UniRef50_B8I4I2 Putative sensor with HAMP domain n=2 Tax=Clostridium RepID=B8I4I2_CLOCE Length = 594 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 83/240 (34%), Positives = 136/240 (56%), Gaps = 11/240 (4%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMAN-KAELRALQSKINPHFLFNALNAI-SS 382 + + MA ++ +I+ ++ ++ E+ +AE+ LQS++NPHFLFN LNAI Sbjct: 355 VIRNFNLMAARINTLINDVYKLELQKKSLELERVRAEINFLQSQMNPHFLFNTLNAILVV 414 Query: 383 SIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIY 442 S++ N +I LS+ LR + KDD + I++EL + Y+ IE+ RF DK Sbjct: 415 SVKNNYTEIVDVIKYLSKTLRRLLSWKDD-LVTIEEELSFTEMYLKIEKFRFCDKFHYNI 473 Query: 443 DIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGID 501 +++E + + IP + +QPLVENA HGIQ K GV+ I++ C + +R++V+D G GID Sbjct: 474 NVNETLLDYQIPKMSLQPLVENACKHGIQTIKEVGVININIDMCESGLRVSVKDNGSGID 533 Query: 502 PKVI----ERVEANEMPGNKIGLLNVHHRVKLLYGE--GLHIRR-LEPGTEIAFYIPNQR 554 + + V++ IG+ NV+ R++L YGE +I + GT I F IP ++ Sbjct: 534 QYTLSGIIDNVKSEVEQSTSIGIRNVYRRLRLYYGENISFNIESCINTGTTIYFTIPFEK 593 >UniRef50_C6JC63 Two-component sensor kinase yesM n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC63_9FIRM Length = 599 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 82/284 (28%), Positives = 151/284 (53%), Gaps = 18/284 (6%) Query: 283 IIIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHA-HQITSSLQEMAVGLSQIIS 341 +I+++ P + + +++G ++ +QI +MA + +I Sbjct: 316 VIMRHAARVMVKPTKKLVDSMTAYQEGNFDSRFEVENQDEINQIGMVYNQMADKVQNLIE 375 Query: 342 TQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPD-TARQLIFNLSR 400 L +AE+ L+ +INPHFL+N L+ IS N + L L + Sbjct: 376 KNY------TLEIANREAEIEFLKMQINPHFLYNCLDTISWLGFSNGNSEITDLAVALGK 429 Query: 401 YLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQP 459 +LR +I K ++ +K+E+ + +Y+ I++ RFGDK+ + ++I +E +N IPS +IQP Sbjct: 430 FLRASI--KREDYYTVKQEMEVVDNYLFIQKYRFGDKIEIRHNIPDEVLNFYIPSFIIQP 487 Query: 460 LVENAIVHGIQPCKGKGVVTISVAECGN-RVRIAVRDTGHGIDPKVIERV---EANEMPG 515 ++EN+IVHG++ KG++ I++ C N ++ + D G G+D + +++V +++ Sbjct: 488 VIENSIVHGLEEQIEKGILWINIQLCNNKYLQFNLTDNGKGMDEEQLKQVIQNYSDKNKK 547 Query: 516 NKIGLLNVHHRVKLLYGEG--LHIRRL-EPGTEIAFYIPNQRTP 556 + IGL NV+ R+ LLYGE H+ + GTE+ F IP + P Sbjct: 548 SSIGLSNVYRRLNLLYGEACEFHVTSVAGEGTEVTFRIPVMQVP 591 >UniRef50_C5EPF7 Periplasmic sensor signal transduction histidine kinase n=2 Tax=Clostridiales RepID=C5EPF7_9FIRM Length = 494 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 67/244 (27%), Positives = 108/244 (44%), Gaps = 24/244 (9%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 +T S M + ++I Q + EL+ LQ +INPHFL+N L+ I Sbjct: 250 LTGSFDHMKGEIGRLIED------IRQEQNQRRVMELQLLQEQINPHFLYNTLDTIVWLA 303 Query: 385 RLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 + ++ +LS + R + + I IK+E+ I+ Y+ I++ R+ D L Sbjct: 304 EGGQNREVVDMVTSLSEFFRTTLS-GGKDFITIKEEMGHIESYLQIQKIRYQDILDYEVT 362 Query: 444 IDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 +DE + I L +QPLVENA+ HGI+ +G+G + + + +RD G G+ Sbjct: 363 LDESLEEYRILKLTLQPLVENALYHGIKNKRGRGHIWVRGYARDDMAVFEIRDDGAGMTQ 422 Query: 503 KVIERVEANEMPG------------NKIGLLNVHHRVKLLYGE--GLHIRRL-EPGTEIA 547 + +E V+ G GL NV R++L YG L + GT Sbjct: 423 EEMEAVQRKLKGGDRPSDRNGSASKGGFGLFNVAERLRLNYGGRCSLEFHSVQGEGTTAL 482 Query: 548 FYIP 551 IP Sbjct: 483 VCIP 486 >UniRef50_B8I0Y1 Putative sensor with HAMP domain n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I0Y1_CLOCE Length = 600 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 72/256 (28%), Positives = 130/256 (50%), Gaps = 20/256 (7%) Query: 314 TLKIYYCHAHQI---TSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINP 370 +K+ Y +++ +++ M + +I+ E + + + E + LQS++NP Sbjct: 346 DVKMPYYKDNELKLVSNTFNNMTYEIKYLINQVYEK------QLLIKETEFKFLQSQMNP 399 Query: 371 HFLFNALNAISSSIRLNPDT-ARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAI 429 HFLFN L I +L+ D +++ +L+ L+ I +I I++EL I Y+ + Sbjct: 400 HFLFNTLITIGYKAKLSKDETVYKMVTSLTELLQAGIYSNSQAKIPIRQELEFIDFYLYL 459 Query: 430 EQARFGDKLTVIYDIDEE--VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGN 487 ++ RFGDKL + +E +N +P L I+PL+ENA+VHG++ GKG + +++ Sbjct: 460 QKMRFGDKLEYKIYVSDESILNFVLPKLSIEPLIENAVVHGLEEKVGKGTIELNIRRENE 519 Query: 488 RVRIAVRDTGHGIDPKVI-----ERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RR 539 + V D G G I + + + N IGL+N H R+KL+YG+ + R Sbjct: 520 SIFFVVTDDGAGFKTDKINLDDNDTINMRKKGHNSIGLMNTHKRIKLMYGDPYGVQIESR 579 Query: 540 LEPGTEIAFYIPNQRT 555 G ++ +IP R+ Sbjct: 580 TNIGAKVTVHIPVDRS 595 >UniRef50_C4FYZ1 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FYZ1_ABIDE Length = 619 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 23/268 (8%) Query: 296 EIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREM 355 + S L K ++G +I H M V L ++I T Sbjct: 358 KFKSAETGDLSVKKAISGDDEISILDEH-----FSHMLVKLDKLIKTNY------VQELD 406 Query: 356 ANKAELRALQSKINPHFLFNALNAISSSIRLNPD-TARQLIFNLSRYLRYNIELKDDEQI 414 K EL+ LQ +INPHFL+N L ISS +N + L RY++ + + Sbjct: 407 RKKLELKNLQLQINPHFLYNTLETISSIAAVNKVFIIGDISGKLGEIFRYSLGKNYGDFV 466 Query: 415 DIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCK 473 + EL I++YI I++ R+GDKL V YDI+ V NC IP ++QP++EN+I+HGI P Sbjct: 467 SLNDELKHIENYIFIQKVRYGDKLEVFYDIENGVENCLIPRFILQPIIENSILHGIAPKA 526 Query: 474 GKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEA-------NEMPGNKIGLLNVHHR 526 G + I+V+ +++ I + D G G+D E + A + +G+ NV+ R Sbjct: 527 TGGTIEINVSLEESKLVIRIEDDGIGMDSDYAELINAAINSPMTDNEDSTGVGMRNVNQR 586 Query: 527 VKLLYGEGLHI---RRLEPGTEIAFYIP 551 +K +YG + + G+ P Sbjct: 587 IKFIYGNEYGLKLKSSVNVGSSCIISFP 614 >UniRef50_C6LII7 Putative HAMP domain protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LII7_9FIRM Length = 605 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 69/239 (28%), Positives = 119/239 (49%), Gaps = 17/239 (7%) Query: 323 HQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISS 382 + + S Q MA +S ++ E E + E+ L+++INPHFL+N L +I Sbjct: 359 NHLQESFQHMAYEISNLMDIIQER------EEQKRELEVNFLRAQINPHFLYNTLFSIRC 412 Query: 383 SIRLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVI 441 ++ + + A Q+I LR + ++ D I + E + Y+ +++ R+G+K+ Sbjct: 413 AVEVGKNNQAAQMISAFIDLLRSTLAVR-DSMIPLCDEFEATRKYLVVQKLRYGEKINYE 471 Query: 442 YDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGI 500 ++ E C + L++QPL ENAI HGI+ G V I A G R+ + + D G G+ Sbjct: 472 LELQEGTEQCMVLPLILQPLAENAIFHGIEAKYETGTVVIESALLGERLLLTITDDGAGM 531 Query: 501 DPKVIERVEA-----NEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIP 551 D + +E+V A + IG+ NVH+R++L YGE + GT + +P Sbjct: 532 DERTLEKVRACLKQPAVKDDSSIGMPNVHNRIRLNYGEEYGLTVESSKGIGTTVTLLMP 590 >UniRef50_Q21NI6 Histidine kinase internal region n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21NI6_SACD2 Length = 380 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 82/254 (32%), Positives = 127/254 (50%), Gaps = 11/254 (4%) Query: 311 VTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINP 370 ++ TL Y H +Q+ +AV L+ Q E + + +A +A+L+ L+ +INP Sbjct: 133 LSWTLLFYCIHYYQLQQEEHLIAVDLAA--QRQEEYLKRLKAETIAKEAQLKMLRYQINP 190 Query: 371 HFLFNALNAISSSIRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAI 429 HFLFN LNAI + L D A +I LS +LRY++E I ++KE+ +K Y+ I Sbjct: 191 HFLFNTLNAIKGLVYLKENDVAADMILRLSTFLRYSLESNPLLNISLEKEVESLKVYLDI 250 Query: 430 EQARFGDKLTVIYDI-DEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNR 488 E RF ++L V Y I D+ +PS+++QP+VENAI + I P + G + I Sbjct: 251 EVVRFAERLKVEYKITDKAKKASVPSMILQPIVENAIKYAIAPSENGGTIEIKGWVDDTF 310 Query: 489 VRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTE 545 + IAV D G GI A++ G +GL N R+ LY + + G Sbjct: 311 LCIAVCDDGPGIGFTT----PADKPEGCGVGLQNTQERLVTLYEDDYQFTLSNKAGGGLR 366 Query: 546 IAFYIPNQRTPVAS 559 + +P Q +S Sbjct: 367 VYIRVPYQTVVASS 380 >UniRef50_C6D150 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D150_PAESJ Length = 626 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 71/249 (28%), Positives = 133/249 (53%), Gaps = 16/249 (6%) Query: 326 TSSLQEMAVGLSQIISTQLEVSRAEQLREM-ANKAELRALQSKINPHFLFNALNAISS-S 383 S + + +I + + L E+ +A+L+ALQ++INPHFL+N L+ I+ + Sbjct: 378 NSDFLALERSVDHLILRVRTLVEEKYLAEIHEREAQLQALQAQINPHFLYNTLDMINWIA 437 Query: 384 IRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 I Q+I +L++Y R ++ K + ++ E+ + Y+ I+Q+RF + V + Sbjct: 438 IGKGASDISQMIDSLAKYFRLSLN-KGKSIVSVEDEVRLAEVYLGIQQSRFPNTFDVRVE 496 Query: 444 IDEEV-NCCIPSLLIQPLVENAIVHGIQPCK-GKGVVTISVAECGNRVRIAVRDTGHGID 501 ++ ++ C IP L++QP+VENA++HGI+ K +G+++I V E + I + D G G++ Sbjct: 497 VNPQIAGCRIPKLILQPIVENALLHGIRKMKQRRGLISIIVTEENEDLLITISDNGIGME 556 Query: 502 PKVIERV--------EANEMPGNKIGLLNVHHRVKLLYGE--GLHIRR-LEPGTEIAFYI 550 + + ++ E ++ G+ GL NV+ R+KL G+ GL I L GT + + Sbjct: 557 EERVRQLLKAALPPEEKSDATGSSYGLFNVNERIKLYSGDHYGLEITSALGVGTTVTIRM 616 Query: 551 PNQRTPVAS 559 R + Sbjct: 617 RADRAHEGN 625 >UniRef50_C6LL34 Putative two-component sensor kinase YesM n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL34_9FIRM Length = 350 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 66/238 (27%), Positives = 124/238 (52%), Gaps = 23/238 (9%) Query: 336 LSQIISTQLEVSRAEQLREM-ANKAELRALQSKINPHFLFNALNAISSSIRLNP-DTARQ 393 + +S + +R+ Q ++ +A+ ALQ++INPHFL+N L +I + D+ Sbjct: 99 MHSQLSLIEQSARSPQFMDLNKRQAQYLALQNQINPHFLYNTLESIRGEALIAGLDSVAD 158 Query: 394 LIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-----V 448 + L+++ RY I K + + +++EL + Y I++ RFGD+L + + + E + Sbjct: 159 MTEALAKFFRYTI-TKVENLVSVEEELDNCETYFGIQKYRFGDRLQLHIEYEPEEWSEIM 217 Query: 449 NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV 508 NC IP L +QP++EN+I+HG + G G + I A +R+ I + D G G+D + + ++ Sbjct: 218 NCRIPKLTLQPILENSIIHGTELKIGTGNLYICFARTQDRLLIRISDDGVGMDEETLTKL 277 Query: 509 EA------------NEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIP 551 E I L+NV++R+ L++G+ I + GT++ +P Sbjct: 278 NRKLGKSAGPLASQEEEKQGGIALVNVNNRIHLIFGDEYGIHVYSVPQSGTDVEITLP 335 >UniRef50_C6IYJ6 Predicted protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IYJ6_9BACL Length = 612 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 68/246 (27%), Positives = 120/246 (48%), Gaps = 20/246 (8%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 + M L Q+I R + ++ +A +ALQ++INPHFLFN LN+I Sbjct: 364 VGKHYNRMLTRLQQLID------RLSKEQQRKEEARFQALQAQINPHFLFNTLNSIKWMA 417 Query: 385 RL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 L + ++I NL R L Y ++ + E + +++EL +K Y+ +++ RF D + D Sbjct: 418 ALSGAEHVGKMITNLGRLLEYTMKTQ-QEVVTLEEELTYLKVYLDLQKIRFHDNVQFEVD 476 Query: 444 IDEEVNC-CIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 + +E+ I +QP+VENAI+HG + + I E + + V D G GI Sbjct: 477 VPDELRSNAILKFTLQPIVENAIIHG---GRTPLAIGIQGEETEQGLVLTVSDNGVGIAE 533 Query: 503 KVIE----RVEANEMPGNKIGLLNVHHRVKLLYGEGLHIR---RLEPGTEIAFYIPN-QR 554 ++ ++ + + IG+ NV+ R+KL +G+ + + GT + +P R Sbjct: 534 AKLKELSSQLNQDHSRYSGIGIYNVNERIKLHFGQDFGLEMSSMIGQGTRVKIRLPRLDR 593 Query: 555 TPVASQ 560 +A Q Sbjct: 594 QALADQ 599 >UniRef50_C9RVZ4 Integral membrane sensor signal transduction histidine kinase n=6 Tax=Geobacillus RepID=C9RVZ4_GEOSY Length = 483 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 73/246 (29%), Positives = 122/246 (49%), Gaps = 22/246 (8%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 +T + +M L Q+I+ E+ + +L + + EL++LQS+INPHFLFN LN ++ Sbjct: 235 LTITFNDMRRNLKQLIA---EMKQKAELDRLVKELELKSLQSQINPHFLFNTLNTVAKMA 291 Query: 385 RL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 L + +LI ++ LRYN+ + + E+ ++Y I+Q RF D++ + Sbjct: 292 YLEDAQQTSRLIEAVAAILRYNL-GDLQRTVTLADEVRIAREYFFIQQTRFFDRIKFSLE 350 Query: 444 IDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGID- 501 + ++ IP L +QPL+ENA +HGI+ + +++SV RV + VRD G G+D Sbjct: 351 AEPSCLDQPIPPLTLQPLIENAFIHGIETYEQGAELSVSVFAENGRVVVEVRDNGVGMDE 410 Query: 502 ------------PKVIERVEANEMPGNKIGLLNVHHRVKLLYG--EGLHIRR-LEPGTEI 546 + R E IGL NV R++L YG + I GT + Sbjct: 411 QVKAELDALIRGEEPPARREQGRGHSTGIGLRNVIRRLQLFYGVMDVAEIESAPGKGTTV 470 Query: 547 AFYIPN 552 ++P Sbjct: 471 RLWLPR 476 >UniRef50_C0C2A0 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2A0_9CLOT Length = 346 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 68/263 (25%), Positives = 126/263 (47%), Gaps = 26/263 (9%) Query: 319 YCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALN 378 + +++ ++ + +++ Q + ++ +AE ALQ++INPHFL+N L Sbjct: 88 FDAEYELMPQWNDVMKKVRHLLNKQ------DAIKMSKKQAEYLALQNQINPHFLYNTLE 141 Query: 379 AISS-SIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDK 437 AI +I D+ + LS + RY+I D+ + +++E+ +++Y I+ RFG+K Sbjct: 142 AIRGDAICAGLDSVAETTEALSIFFRYSI-TGVDKLVTLEEEIDNVENYFTIQHYRFGEK 200 Query: 438 LTVIYDIDEE---VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVR 494 L + +E + +P L IQP VENAI HG++ GVV + + ++ I V Sbjct: 201 LKLQITYPKEEEVLQLRLPKLTIQPFVENAIYHGLEKKVNGGVVRVKIDTTEQKLMITVS 260 Query: 495 DTGHGIDPKVIERVEA------------NEMPGNKIGLLNVHHRVKLLYGEGLHI---RR 539 D G G+ + +E++ + I + NV+ R+KLL+GE + Sbjct: 261 DNGVGMPEEQVEKINGYFEKVAVSYVGEDRKKKGGIAMKNVNSRIKLLFGEDYGVHVYSV 320 Query: 540 LEPGTEIAFYIPNQRTPVASQAT 562 GT++ +P R + T Sbjct: 321 AGIGTDVKIMLPRLRRDEYEERT 343 >UniRef50_D2LUI0 Histidine kinase n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LUI0_BACS4 Length = 597 Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 79/265 (29%), Positives = 129/265 (48%), Gaps = 17/265 (6%) Query: 307 EKGVVTGTLKIY-----YCHAHQITSSLQEMAVGLSQIIST-QLEVSRAEQLREMANKAE 360 + V G L Y Q+++ M + +++ + + + L + N+ + Sbjct: 333 IRKVARGNLTTYSEVEGRDEIGQLSTEFNRMTKSIKELLEEIEHKNTEKRVLEKRQNQIK 392 Query: 361 LRALQSKINPHFLFNALNAISSSIRLNPDT-ARQLIFNLSRYLRYNIELKDDEQIDIKKE 419 L+ L S+INPHFLFN L I L+ + ++ L + LR +IE+ + +K+E Sbjct: 393 LKMLASQINPHFLFNTLETIRMKTLLSGEKEIAHIVKRLGKLLRSSIEVGGG-MVPLKQE 451 Query: 420 LYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVV 478 + +K Y+ I+ RF ++L ID + IP L+IQPLVENA++HG++ G V Sbjct: 452 MEMVKAYLEIQNFRFDERLEYELKIDPKTEAIKIPPLIIQPLVENAVIHGLENKIEGGKV 511 Query: 479 TISVAECGNRVRIAVRDTGHGIDPKVIERV-----EANEMPGNKIGLLNVHHRVKLLYG- 532 + G+ + ++V+D G GI K E + E N+IGL NVH R+ L Y Sbjct: 512 IVETRLIGDDMIVSVKDNGVGISTKKKEEIFLSLTENTVEAENRIGLRNVHERILLTYKT 571 Query: 533 -EGLHIRRLE-PGTEIAFYIPNQRT 555 GL I + GT ++F IP Sbjct: 572 SNGLVINSEQHKGTRVSFSIPLNED 596 >UniRef50_C6CXU7 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CXU7_PAESJ Length = 494 Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 71/244 (29%), Positives = 128/244 (52%), Gaps = 20/244 (8%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 +T + M + +I E+ +L ++ K E+++LQ++INPHFLFN LN ++ Sbjct: 238 LTDTFFNMCRNIEGLIK---EIEAKSELDQLVKKMEIKSLQNQINPHFLFNTLNMVAKMA 294 Query: 385 R-LNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 + +++ ++S LRYN+ K + + ++ EL +K+Y I++ RFG ++ I Sbjct: 295 YVEGAEKTSEVVESVSALLRYNLS-KINYTVQLRDELDIVKEYFFIQKMRFGKRINFIDH 353 Query: 444 ID-EEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 I E ++C IP L +QPLVENA +HG++ + G + +SV+ V + V+D G GI Sbjct: 354 ISHEALDCPIPPLTLQPLVENAFMHGVESYEEGGEIKLSVSMSEGNVIVEVKDNGVGITE 413 Query: 503 KVIERVE-----------ANEMPGNKIGLLNVHHRVKLLY--GEGLHIRRL-EPGTEIAF 548 + I +++ N I L NV R++L Y + + I+ + GT + Sbjct: 414 ERIIQLQQILDNYSKDSLKGPGESNGIALHNVRRRLQLFYQCDDVMEIQSIPGEGTIVRL 473 Query: 549 YIPN 552 ++P Sbjct: 474 FLPY 477 >UniRef50_C6D6I3 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D6I3_PAESJ Length = 578 Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 68/234 (29%), Positives = 123/234 (52%), Gaps = 15/234 (6%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSS 383 Q+ S M + +++ Q ++ + +AEL+ALQS+INPHFL+N L+ ++ Sbjct: 350 QLILSYNYMINSVQELMVEQYKLGQE------KTQAELKALQSQINPHFLYNTLDMLNWM 403 Query: 384 IRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIY 442 + D +Q+I+ LS Y + + K ++ + +K EL Y+ I++ RF +++ + Sbjct: 404 AQKEERDNIQQIIYALSDYYKLILN-KGNDFVTVKDELRLSSIYMEIQKKRFKNRVQLEV 462 Query: 443 DIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGK-GVVTISVAECGNRVRIAVRDTGHGI 500 +++E ++C +P + IQPLVENAI+HGI G G + I+ +R+ IA+ D G G+ Sbjct: 463 EVEESVMDCMLPKITIQPLVENAILHGISENPGGRGTIRITGYRDQDRLMIAICDDGVGM 522 Query: 501 DPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIP 551 + E G+ GL N+ R+ L +G+ + GT + +P Sbjct: 523 PEE--GSGEERRHRGSGYGLSNIRKRLDLYFGQTAELQLHSTPGEGTCVTINVP 574 >UniRef50_UPI0001C36B1D histidine kinase n=2 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36B1D Length = 585 Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats. Identities = 85/297 (28%), Positives = 142/297 (47%), Gaps = 32/297 (10%) Query: 279 NYGKIIIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQ 338 ++G+ I E H+ E ++ +IPL++ G L + Q +++Q + Q Sbjct: 286 SFGRRIAVIRGEMHKISE-GNLDIIPLFDGTDELGLL---FRDMQQTINNIQNLNR---Q 338 Query: 339 IISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISS--SIRLNPDTARQLIF 396 + QL+ R + M E + L ++INPHFLFN L I S +PDTA +I Sbjct: 339 LYENQLDRQRLMNQQRMI---EFQMLANQINPHFLFNTLETIRMNASTHKDPDTAY-IIT 394 Query: 397 NLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN---CCIP 453 L + +RY+++ K D+ + + +EL + Y+ I+ R+ +K++ + +E+ + Sbjct: 395 QLGKMMRYSLQTK-DQLVSLAQELAYTRSYLEIQHFRYREKISYEILVSDEITQDTYYLM 453 Query: 454 SLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEM 513 LLIQPLVENAI HGI P G G + I + + + I + D G G+D ++ + + Sbjct: 454 PLLIQPLVENAISHGISPMDGPGFLLIHIEPVKDYLSIVIHDNGVGMDEGALQALRESVE 513 Query: 514 ------------PGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRT 555 IGL NV R++L YG + R GT + +P RT Sbjct: 514 APEPEYTEDPVPTERHIGLRNVSSRIRLFYGREYGVDIESRPMEGTAVTLRLPLPRT 570 >UniRef50_C6D4D1 Putative sensor with HAMP domain n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D4D1_PAESJ Length = 597 Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats. Identities = 68/247 (27%), Positives = 117/247 (47%), Gaps = 19/247 (7%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISS-S 383 + M + ++I T+ + + A+++A+Q++INPHFL NAL AI + Sbjct: 358 LERRFNSMLSRIKELIQTEYKATIE------KRTAQVKAMQAQINPHFLHNALQAIGGIA 411 Query: 384 IRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 + N + +S RY I +K D + I EL ++Y+ I++ RF + + D Sbjct: 412 LSRNVPEINDHVRAISDLFRYTIRMKSD-LVTIADELEHARNYLQIQKLRFQSMIEIRID 470 Query: 444 IDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 DEE + C IP +QP+VEN VHG++ ++I V + + + I + D G GID Sbjct: 471 ADEECLGCRIPKFSLQPIVENCFVHGLEGKMDAWTISIRVEKVLDEIEIDIADNGMGIDE 530 Query: 503 KVIERVEA-------NEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPN 552 + + + G +G+ NV+ R+KLL+G+ + GT + IP Sbjct: 531 ARLAEIRRQLSQPADGQENGEGMGISNVNARIKLLFGDEYGLFISSEWNAGTTVKLLIPA 590 Query: 553 QRTPVAS 559 Q + Sbjct: 591 QEEGEKT 597 >UniRef50_A6LST6 Histidine kinase internal region n=4 Tax=Clostridium RepID=A6LST6_CLOB8 Length = 596 Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats. Identities = 69/242 (28%), Positives = 121/242 (50%), Gaps = 17/242 (7%) Query: 323 HQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISS 382 +++++ M GL+ + Q+ ++++ KAEL ALQ +INPHF++N L +I Sbjct: 359 RELSANFNYMLDGLNNYVHAQI------KMQKEKRKAELHALQMQINPHFIYNTLASIKW 412 Query: 383 SIRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVI 441 + + + Q I LR I K +E I I++E+ + +Y+ I R+GD + V Sbjct: 413 LMWQGSTEKSIQTIDAFISLLRNTISNK-NEMITIQEEIENLNNYVLINHIRYGDNINVN 471 Query: 442 YDI-DEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGI 500 + + N IP L++QP +ENA HG + G + + V E + + D G G+ Sbjct: 472 FFVMPNRENYIIPKLILQPFIENAFFHGF-NERNNGSIHVFVNEQKQNLICEIIDNGVGM 530 Query: 501 DPKVIERVEANEMPGN----KIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQ 553 + ++++ + + IG+ NV+ R+KLLYG+ I L GT + IP Q Sbjct: 531 TAEEVKKILNDSSKKHEHFTSIGIQNVNDRIKLLYGDDYGISISSELGKGTTVRVTIPAQ 590 Query: 554 RT 555 + Sbjct: 591 KE 592 >UniRef50_B8I426 Putative sensor with HAMP domain n=2 Tax=Clostridium RepID=B8I426_CLOCE Length = 627 Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats. Identities = 77/247 (31%), Positives = 130/247 (52%), Gaps = 25/247 (10%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 + + MA + +++ + + +AEL+ALQS+INPHFLFN L +I+ Sbjct: 373 LHKTFNNMAKEIDHLVTWIY------REQITRKEAELKALQSQINPHFLFNTLESINWMA 426 Query: 385 RLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 +LN ++ +LS L +I +DD I I++E I YI++ + RF DK+T+ + Sbjct: 427 QLNNVPEISNIVTDLSALLEASI-GRDDRLIPIEEEFMYIDKYISLLKRRFEDKITLKKE 485 Query: 444 IDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 ID + + IP LLIQPL+ENA+ HG++ + KGV+ ++ G+ + + V D G+GI Sbjct: 486 IDPQVLYIKIPRLLIQPLIENAVYHGVESSREKGVIMLNARIQGDTILLEVIDNGNGISK 545 Query: 503 KVIERVEAN-------------EMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEI 546 + + ++ + E IG+ NV+ R+KL YGE I + T++ Sbjct: 546 EDLLKLNKSLEMDNDTYFKSLREKKNKSIGIDNVNRRIKLFYGEKYGIKIESSINIFTKV 605 Query: 547 AFYIPNQ 553 +P Q Sbjct: 606 TVCLPLQ 612 >UniRef50_A6M1T7 Histidine kinase internal region n=2 Tax=Clostridium RepID=A6M1T7_CLOB8 Length = 589 Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats. Identities = 65/245 (26%), Positives = 116/245 (47%), Gaps = 18/245 (7%) Query: 318 YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNAL 377 Y ++ S M ++ +I + + AE+ LQ++I PHF++N L Sbjct: 347 YNDEIGELGGSFNTMVKEINNLIKLV------QIEEKNKRLAEMNVLQAQIKPHFMYNTL 400 Query: 378 NAISSSIRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGD 436 + I N + ++I + LR ++ K E I +K+EL ++ Y+ I++ R+ D Sbjct: 401 DTIRWMAEEHNEEDIVEIIEAFTNLLRISLS-KGKEIISVKEELSHVQSYLIIQKIRYED 459 Query: 437 KLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRD 495 KL D+E +N + L++QPLVENAI HGI+ +G G + I+ N + V D Sbjct: 460 KLDYEIQFDKEILNYKLIKLILQPLVENAIYHGIKEKRGNGKILITGKIEDNLLCFTVAD 519 Query: 496 TGHGIDPKVIERVEANEMPGN------KIGLLNVHHRVKLLYGEGLHI---RRLEPGTEI 546 G G+D + + ++ + G+ NV+ R+K+++G + L GT + Sbjct: 520 NGKGMDEETLNKINNMLNNNDGNKNQIGYGIFNVNERIKIIHGSEYGLVYRSILGEGTIV 579 Query: 547 AFYIP 551 P Sbjct: 580 ELRHP 584 >UniRef50_A8S8Z5 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8Z5_9FIRM Length = 605 Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats. Identities = 66/250 (26%), Positives = 124/250 (49%), Gaps = 24/250 (9%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSS 383 I + ++A + +++ ++E R +Q + E R LQ+++NPHF++N LN+I Sbjct: 353 DIGRGINQLAENVDSLMTRRVEDERRKQ------ELEYRMLQNEVNPHFIYNTLNSIRWM 406 Query: 384 IRLN-PDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIY 442 + +++ +R + +I + + +++EL + DY I+Q R+G L + Sbjct: 407 ATIQHAPGIAEMVTAFARLTK-SISKGTQKLVPLQEELALLNDYFTIQQYRYGGDLEIEV 465 Query: 443 -DIDEEV---NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGN--RVRIAVRDT 496 I+ E +C IP +QPLVENAI HG++P G G V + ++ + V + + D Sbjct: 466 SRIESETLCRDCMIPRFTLQPLVENAIFHGLEPKGGHGSVLLDISTDPDTGDVLLRITDD 525 Query: 497 GHGIDPKVIERVEANEMPG-------NKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEI 546 G G+ P+ + + G +GL NV+ R++ +GEG + + GTE+ Sbjct: 526 GVGMPPEQVAHLLDEPAEGAEKAEKFRHVGLWNVNRRIRYSFGEGYGLTIESEEDVGTEV 585 Query: 547 AFYIPNQRTP 556 +P Q+ Sbjct: 586 TIRLPYQQKG 595 >UniRef50_C6IVH0 Histidine kinase internal region n=2 Tax=Bacillales RepID=C6IVH0_9BACL Length = 606 Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats. Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 31/259 (11%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 + S MA+ +I E + ELR LQS+INPHFL+N L++I Sbjct: 342 LIQSFNRMALVQKHLIEDHYE------QQLRLKTTELRFLQSQINPHFLYNTLDSIYWMA 395 Query: 385 RL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 + + + +++ NLS + R ++ E +++ + + Y+ I+Q RF D V Y Sbjct: 396 KNYDAEEISEMVMNLSSFFRLSLNKGRQEF-TVEESIAHLNYYLRIQQLRFMDNFQVEYR 454 Query: 444 IDEEVNCCIP--SLLIQPLVENAIVHGIQPCKGKGVVTISVA-ECGNRVRIAVRDTGHGI 500 I E+ + IP LL+QP+VENAI+HG++ + G + IS E + + I V D G GI Sbjct: 455 ISEQ-SKRIPLLKLLLQPIVENAIIHGMEGKEVGGYLVISSWVEQEHTLHIRVEDNGPGI 513 Query: 501 DPKVIERVEA----------------NEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLE 541 + + + ++ E + GL NV R+KL YG + Sbjct: 514 EEERLHYIQQELDRMDLRKIVAYSQDEEQVKDLFGLRNVLSRMKLYYGPEARLTVQSAPG 573 Query: 542 PGTEIAFYIPNQRTPVASQ 560 GT + IP + S Sbjct: 574 EGTTVTLSIPLKEGQDESD 592 >UniRef50_C5EPK6 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EPK6_9FIRM Length = 616 Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats. Identities = 68/235 (28%), Positives = 131/235 (55%), Gaps = 7/235 (2%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLRE-MANKAELRALQSKINPHFLFNALNAISSS 383 + ++QEM+ + ++ + +Q + + LQS++NPHFLFN L +I+ Sbjct: 380 LAFNIQEMSGRIKALMDQVVRDKEIQQQNQYQLLEFRYHELQSQVNPHFLFNILQSINGI 439 Query: 384 IRLNPDT-ARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIY 442 ++N D +LI LS++ R N+E ++ +++EL K+Y+ + + + D+L + + Sbjct: 440 AQINGDRQVSRLICMLSKFFRGNLERRNVS-CQLREELEYSKNYLELYKDIYPDRLDIEW 498 Query: 443 DIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGID 501 D+DE ++ IP+ ++QP+VEN++VHG++P G + I + E G + I+V D G GI Sbjct: 499 DVDERFLDVGIPTYILQPIVENSLVHGMEPMIGTCTIRIRIREQGGCLVISVWDDGQGIT 558 Query: 502 PKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQ 553 P+ ++++ A IG+ NV R+++LYG+ + TE+ +P + Sbjct: 559 PEKLKQLMAGTGESRHIGIRNVQDRIQMLYGKEYGLTIRSEYHEYTEVRLRLPLR 613 >UniRef50_B8I0K8 Histidine kinase n=2 Tax=Clostridium RepID=B8I0K8_CLOCE Length = 488 Score = 234 bits (598), Expect = 7e-60, Method: Composition-based stats. Identities = 71/241 (29%), Positives = 118/241 (48%), Gaps = 20/241 (8%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 +T+S M + ++ E + EQ+ K EL+ +Q++INPHFL+N L+ I Sbjct: 246 LTTSFNTMIEKIGSLV----EDVKLEQIN--LRKTELKLMQAQINPHFLYNTLDTIIWLA 299 Query: 385 RLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 N ++ LSR+ R + K + I IK+E I+ Y+ I+Q R+ D L + Sbjct: 300 EGNKTKDVVSMVSALSRFFRIALS-KGYDYISIKEEEMLIRSYLQIQQYRYQDILEYEIN 358 Query: 444 IDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 I E + C I L +QP+VENA+ HGI+ +G G + + + + V+D G G++ Sbjct: 359 IPEHMEQCSILKLTLQPVVENALYHGIKNKRGMGKIVVEGYCEEDTIWFKVKDNGIGMNQ 418 Query: 503 KVIERV--------EANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIP 551 + +E++ E + N GL NV+ R+KL +G + G+E IP Sbjct: 419 QKVEQIKKLFNRPKEKDAPEQNGFGLFNVNERIKLNFGAEYGLDVKSEYGIGSEFTICIP 478 Query: 552 N 552 Sbjct: 479 K 479 >UniRef50_C6CWA9 Putative sensor with HAMP domain n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWA9_PAESJ Length = 580 Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats. Identities = 74/235 (31%), Positives = 123/235 (52%), Gaps = 13/235 (5%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSS 383 QI ++L++M+ LS +IS +AEL LQ++INPHFL+N+L +ISS Sbjct: 354 QIGNALRKMSQRLSSLISDVY------MKEIDKREAELNVLQAQINPHFLYNSLASISSL 407 Query: 384 -IRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIY 442 IR + +++ +L+++ R ++ K + I +E+ + Y++I+Q RF + L V Y Sbjct: 408 AIRNDDPRMNKMVTDLAKFYRISLN-KGKNTLSIHEEIQLTRYYVSIQQVRFANLLRVHY 466 Query: 443 DIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGID 501 DI+E + C I L +QP VEN I H I + + I G + + V D G G+ Sbjct: 467 DIEESVLPCRILKLTLQPFVENCINHAIWDHECGINIIIRAYREGQDIILKVIDDGMGM- 525 Query: 502 PKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQ 553 + +E + G+ NV +R+KLL+G+ + RL GT + IP + Sbjct: 526 KMPSGDLPQSEDTLSGYGVRNVDNRIKLLFGDSYGVSIFSRLGIGTSVTIRIPGK 580 >UniRef50_UPI0001850905 two-component sensor histidine kinase n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850905 Length = 486 Score = 234 bits (597), Expect = 8e-60, Method: Composition-based stats. Identities = 77/259 (29%), Positives = 135/259 (52%), Gaps = 18/259 (6%) Query: 314 TLKIYYCHAHQIT---SSLQEMAVGLSQIISTQLEVSRAE----QLREMANKAELRALQS 366 LKI +I+ +M + ++ + + ++ E Q + + +++L +LQS Sbjct: 220 DLKIEVKSDDEISFLAKMFDQMRININNYLVEIKQKAQLERELQQNKLLLQESQLISLQS 279 Query: 367 KINPHFLFNALNAISSSIRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKD 425 +INPHFL+N LN +S L + L+ +++ LRYN++ + D+ + E++ +K Sbjct: 280 QINPHFLYNTLNTLSKKAYLEGSEETSDLLVSVAGLLRYNLK-RLDKSTTLLDEVHVLKQ 338 Query: 426 YIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAE 484 Y+ I++ARF D+L DI+E+ ++ IP L +QP+VENA++H ++P + G + V Sbjct: 339 YMDIQKARFTDRLHFHMDIEEDCLSVQIPRLTLQPIVENAVIHAVEPNEDGGHIWFRVYR 398 Query: 485 CGNRVRIAVRDTGHGIDPKVIERVEANEMP-----GNKIGLLNVHHRVKLLYGEG---LH 536 R+RI + D G GI + I + E IG+ NV +R++L Y E L Sbjct: 399 QNERIRIEIEDDGDGISEENIRAILEGESRDTEGHSTGIGMSNVVNRLRLFYNETNILLF 458 Query: 537 IRRLEPGTEIAFYIPNQRT 555 R E GT + IP + Sbjct: 459 ERDREKGTRVILMIPMKGE 477 >UniRef50_A4IP92 Two-component sensor histidine kinase n=5 Tax=Geobacillus RepID=A4IP92_GEOTN Length = 576 Score = 234 bits (597), Expect = 8e-60, Method: Composition-based stats. Identities = 72/253 (28%), Positives = 125/253 (49%), Gaps = 22/253 (8%) Query: 317 IYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNA 376 I ++ S+ ++ + +I T Q + +++EL+ALQ++INPHFL+N Sbjct: 326 ITVNEIRELNSTYNQLVRETNHLIKTVY------QKEIIRSQSELKALQAQINPHFLYNT 379 Query: 377 LNAISSSIRLNPDT-ARQLIFNLSRYLRYNIELK-DDEQIDIKKELYQIKDYIAIEQARF 434 L ++ S+ + ++ ++S RY I +D+ + +K+E I +YI I + RF Sbjct: 380 LESLRWSLEEKGEEDLADVVVSMSDLFRYTISRNSNDDWVTLKEEFDHIGNYIEIIKFRF 439 Query: 435 GDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVA-ECGNRVRIA 492 GD++ + E + + IP LLIQPLVENA+VHG + +T++ + ++I Sbjct: 440 GDRIKWCLLLPEALEHVKIPKLLIQPLVENAVVHGSENQLASCTITVAAELASDSYIQIV 499 Query: 493 VRDTGHGIDPKVIERVEAN-------EMPGNKIGLLNVHHRVKLLYGE----GLHI-RRL 540 V D G G+D + ++ V+ G + L NV R++L Y E + I Sbjct: 500 VEDDGVGMDEERLQAVKQAMDTGDIISKSGKGMALHNVKKRLQLYYNEEISDSITICSHK 559 Query: 541 EPGTEIAFYIPNQ 553 GT+I IP Sbjct: 560 NKGTKITLKIPVN 572 >UniRef50_C7IMD1 Histidine kinase n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IMD1_9CLOT Length = 594 Score = 234 bits (597), Expect = 8e-60, Method: Composition-based stats. Identities = 77/275 (28%), Positives = 135/275 (49%), Gaps = 22/275 (8%) Query: 290 EAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVS-R 348 E T + + +P E G Q++ L M ++ +I V+ + Sbjct: 330 EDMHTVTLGNFDFLPSIEGNDEIG----------QLSRDLGVMVKSINDLIKEVYVVNMQ 379 Query: 349 AEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDT-ARQLIFNLSRYLRYNIE 407 QL + +L+ L S+INPHFLFNAL AI N D ++I L + +R N+E Sbjct: 380 KNQLAIRQREIKLKILASQINPHFLFNALEAIRMRAYCNGDEEVAEVIMLLGKIMRRNLE 439 Query: 408 LKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIV 466 + +E + +E+ IK Y+ I++ R+ ++ + ++ + +IQP++ENA+V Sbjct: 440 I-GNELVFFHEEVNLIKAYLDIQKFRYRNRFNYTLNYSRALDNYKMLPFIIQPIIENAVV 498 Query: 467 HGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV-----EANEMPGNKIGLL 521 HG++ + G +++ + +RI + D G G+D + + + E + G IGL Sbjct: 499 HGLKSVEEGGDISLKAEKESGILRIIIEDNGCGMDEEQMRYIADSLNEVEDSVGQHIGLK 558 Query: 522 NVHHRVKLLYGE--GLHIRR-LEPGTEIAFYIPNQ 553 NVH R+KL YGE G+ I L GT++ +P + Sbjct: 559 NVHQRIKLYYGEDHGMTITSTLGKGTKVEITLPAE 593 >UniRef50_C6JD26 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD26_9FIRM Length = 599 Score = 234 bits (597), Expect = 8e-60, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 130/256 (50%), Gaps = 12/256 (4%) Query: 310 VVTGTLKIYYCHAHQITSSLQEMAVGLSQIIST-QLEVSRAEQLREMANKAELRALQSKI 368 V TG+L+ + + ++A+G + ++ ++ + + + + + ALQS+I Sbjct: 333 VATGSLRTRINVDN-MGEDFTKLAIGFNSMMDEIEVLMEQVKLEQHQLEQIRFNALQSQI 391 Query: 369 NPHFLFNALNAISS-SIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYI 427 PHFL+N L I +I ++ L++Y R + K + I I++E+ I++Y+ Sbjct: 392 QPHFLYNTLECIHWQAIAEGNKEISTMVKALAKYYRICLS-KGHDVITIREEVEHIRNYM 450 Query: 428 AIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGK-GVVTISVAEC 485 I+ R+ + + ++ +V IP L +QPLVEN+I HG++ +GK G + ++ + Sbjct: 451 IIQNMRYDNIIGSEIVVESQVEESLIPKLTLQPLVENSIYHGMKVKEGKTGTLYLTAYKN 510 Query: 486 GNRVRIAVRDTGHGIDPKVIERVE---ANEMPGNKIGLLNVHHRVKLLYGEGLHI---RR 539 + V I V DTG G+ + I+ + + G+ NV+ R++LL+GEG + + Sbjct: 511 EDEVIIKVSDTGTGMSQEQIDEMNEQLSRYEDSFGYGVRNVNKRIELLFGEGYGLNYQKN 570 Query: 540 LEPGTEIAFYIPNQRT 555 G + ++P Q Sbjct: 571 DSGGVTVVIHLPYQTE 586 >UniRef50_C6CWQ5 Putative sensor with HAMP domain n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWQ5_PAESJ Length = 591 Score = 234 bits (597), Expect = 9e-60, Method: Composition-based stats. Identities = 70/236 (29%), Positives = 115/236 (48%), Gaps = 14/236 (5%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 ++ M ++ ++ E+ E +AE++AL ++NPHFL+N LN ++ + Sbjct: 365 LSQRFNRMNDRIAMLVKENYEIKLKE------KEAEIQALNMQMNPHFLYNTLNIMNWTA 418 Query: 385 RLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 N +++ LS L Y KD E + + +EL +++Y I ARF K TV Y+ Sbjct: 419 LENRQTELSKMLVCLSNMLHYT-SRKDWEAVHLSEELEWMRNYFFIMSARFEGKFTVAYE 477 Query: 444 IDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 I+ + +P LL QP VENAI+HG + G +TI + VRD G GI Sbjct: 478 IEPVLYENKLPRLLFQPFVENAILHGFSGVEEGGQITIRGWIEDDSRYFEVRDNGRGISK 537 Query: 503 KVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRR---LEPGTEIAFYIPNQRT 555 + I+ + E IG+ N R+++ YG+ IR GT I ++P++ Sbjct: 538 EGIDAILYKE--SASIGIKNTISRIRMAYGDEYGIRIHSAPGKGTSIVIHLPSKTQ 591 >UniRef50_UPI0001C36BEE signal transduction histidine kinase, LytS n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36BEE Length = 282 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 75/242 (30%), Positives = 120/242 (49%), Gaps = 24/242 (9%) Query: 333 AVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRL-NPDTA 391 A Q+ ++++ +R + +A+L ALQS+INPHFL+N L I S L + D+ Sbjct: 34 AERERQLSELEVKLQDEYSVRMVDKQAKLSALQSQINPHFLYNTLECIRSEALLYDCDSI 93 Query: 392 RQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE---- 447 ++ L+ + RY+I K++ + +++E I++Y I+ RF DK + E Sbjct: 94 ARMAKALASFFRYSISKKEN-IVTLREEFNNIENYFLIQSYRFDDKFSFEILAAPEDREA 152 Query: 448 VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIER 507 +C IP L +QP+VENAI HG++ KG VTI V V I V D G GI + +E Sbjct: 153 YSCLIPKLSLQPIVENAIFHGLETKPDKGKVTIRVEMTEKNVIIIVSDDGVGIGREELEL 212 Query: 508 VE---------------ANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFY 549 + + GN I L NV R+KL++G+ + GT++ Sbjct: 213 MRDSLKNSKKETDKECKSPGERGNGIALANVSQRIKLIFGDDYGLNLYSTKGIGTDVEII 272 Query: 550 IP 551 +P Sbjct: 273 LP 274 >UniRef50_UPI0001973B3A histidine kinase n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973B3A Length = 562 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 66/259 (25%), Positives = 116/259 (44%), Gaps = 26/259 (10%) Query: 323 HQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISS 382 + + + M+ ++ ++ + + +E EL+ Q +INPHFL+N L++I Sbjct: 306 NVLARTFNIMSDEIAGLMD------KTRREQENLRVMELKLRQEQINPHFLYNTLDSIVW 359 Query: 383 SIRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVI 441 N ++ +LS + R + D I I +E I+ Y+ I++ R+ D L Sbjct: 360 MAEGGNNRQVVEMTSDLSDFFRTVLSEGHD-FITIAEEEQHIRSYLKIQKIRYEDVLDYR 418 Query: 442 YDIDEEVNCCI-PSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGI 500 +++E + + +++QP+VENA+ HGI+ +G G ++I E N + V D G G+ Sbjct: 419 IEMEERIRSRVVLKMILQPIVENALYHGIKNKRGGGTISIRGYEDKNGIVFEVEDDGTGM 478 Query: 501 DPKVIERVEANEMPG-----------NKIGLLNVHHRVKLLYGEG--LHIRRL-EPGTEI 546 D + + ++ G GL NV R+ + YGE L I GT + Sbjct: 479 DQETLSKLREKIKSGREGREEPVRKSGGFGLSNVAQRLSMYYGESSALVIESEKGVGTCV 538 Query: 547 AFY---IPNQRTPVASQAT 562 Y IP R T Sbjct: 539 KLYLGQIPLSRREDEKSRT 557 >UniRef50_D0KBE3 Signal transduction histidine kinase, LytS n=7 Tax=Enterobacteriaceae RepID=D0KBE3_PECWW Length = 412 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 67/241 (27%), Positives = 120/241 (49%), Gaps = 15/241 (6%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 HA+ I L+ L+ + ++E+ R+ ++AE +AL +INPHFLFN LN Sbjct: 174 AHANNIQRELRHKEQELTSALRKRVEIERS------LHEAEFKALSYQINPHFLFNVLNT 227 Query: 380 ISSSI-RLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 I + ++ + S +RY + ++ I + +E+ + Y++I++ R D+ Sbjct: 228 IGRLAFLEDSKRTETMVHDFSDMMRYLLRKNNNGLITLGQEINYVNCYMSIQKVRMNDRF 287 Query: 439 TVIYDIDEEVNCCI-PSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTG 497 +DI ++ N + P L++QPLVEN + ++P K + + + G V I V D G Sbjct: 288 DYTFDISDKYNDIVCPFLILQPLVENFFNYVVEPRDTKSHIILRATDDGKDVIIEVTDNG 347 Query: 498 HGIDPKVIERVEANEM--PGNKIGLLNVHHRVKLLYGEGLHIRRLEP-----GTEIAFYI 550 GI + IE + + IG+ N+ +R++LL+GE ++ + P GT I Sbjct: 348 DGISQEDIEHILSGNQNRQKGGIGINNIKNRLQLLFGESYGLKIISPHKPMLGTTIKIRF 407 Query: 551 P 551 P Sbjct: 408 P 408 >UniRef50_A3DFT2 Signal transduction histidine kinase, LytS n=5 Tax=Clostridiales RepID=A3DFT2_CLOTH Length = 574 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 79/262 (30%), Positives = 137/262 (52%), Gaps = 11/262 (4%) Query: 302 VIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEV-SRAEQLREMANKAE 360 + L + + G + Y + QE+ Q++ + E+ R +L E E Sbjct: 310 IEELRKSILEMGRGNMEYSLRPHVFEEFQELNDTFRQMVLQREELQKRNNELMERKRIME 369 Query: 361 LRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKEL 420 +R L+ KINPHFLFN L + + ++P A ++I + +RYNI + D + +K ++ Sbjct: 370 IRQLEEKINPHFLFNVLETLRYEVMIDPAKASEMIMAFANIMRYNIYYR-DTIVPLKTDI 428 Query: 421 YQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVT 479 +KDY+ +++ R+ +LT DI EE+ C +P L+IQP+VENA+ HG++ + V Sbjct: 429 EHVKDYLMLQKMRYNRRLTYSIDIPEELMECKVPKLVIQPIVENALKHGMKNVETIN-VN 487 Query: 480 ISVAECGNRVRIAVRDTGHGIDPKVIER----VEANEMPGNKIGLLNVHHRVKLLYGE-- 533 I+ + +R++V D G GI+P+++ +E ++ IG+ N H ++LLYG Sbjct: 488 ITASVENENLRLSVEDNGSGIEPEILNELIKDLEREDVYKEHIGMYNSHRVIRLLYGPPY 547 Query: 534 GLHIRRL-EPGTEIAFYIPNQR 554 GL I GT + +P R Sbjct: 548 GLKIESTYGKGTVVNIILPINR 569 >UniRef50_A9KTC9 Histidine kinase internal region n=3 Tax=cellular organisms RepID=A9KTC9_CLOPH Length = 603 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 64/251 (25%), Positives = 121/251 (48%), Gaps = 19/251 (7%) Query: 319 YCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALN 378 Y ++T +M V + ++I+ ++ AE ++ELRALQ++INPHFL+N L+ Sbjct: 360 YDEVGEVTECFNQMVVEIKELINNNYVMALAE------KESELRALQAQINPHFLYNTLD 413 Query: 379 AISS-SIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDK 437 ++ ++ + + I LS+ R + + + +E + Y+ I++ RF + Sbjct: 414 SLYWRALDAGNEEISEDILALSQLFRMVLS-EGKGVTTVAQEKELLTRYLHIQKMRFSKR 472 Query: 438 LTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 L I+EE + IP L++QP VENAIVHG + + ++ ++ + N++ + D Sbjct: 473 LDYKIAIEEEVLEAVIPKLILQPFVENAIVHGFENVGTECLLLVTGSLSDNQILFCIEDN 532 Query: 497 GHGIDPKVIERV-------EANEMPGNKIGLLNVHHRVKLLYGEG--LHIRRL-EPGTEI 546 G G+ + IE + + + NV R++L Y + L I GT + Sbjct: 533 GAGMTKEQIEAIWNVEDFKRYANQRVGRYAIKNVKERLELKYQDNFMLTIESERGKGTTV 592 Query: 547 AFYIPNQRTPV 557 IP ++ + Sbjct: 593 TIRIPFEKKEI 603 >UniRef50_UPI000178A0E3 integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A0E3 Length = 609 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 78/265 (29%), Positives = 137/265 (51%), Gaps = 25/265 (9%) Query: 303 IPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELR 362 + K T + + C +++ + ++MA + I TQ +R + +AE Sbjct: 341 MDFRIKVRSTNEVGMLACDINRVINEREQMARDM---IKTQ---ARLYESELSQKQAEFA 394 Query: 363 ALQSKINPHFLFNALNAISSS-IRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELY 421 ALQS+INPHFL+N LN ISS + Q+ +S+ RY+I + D+ + I++EL Sbjct: 395 ALQSQINPHFLYNTLNCISSIGLEYGSREIAQIASCMSKIFRYSI--RKDDLVRIREELD 452 Query: 422 QIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTI 480 I+ Y+ I R+ +K + D+DE + P +++QP+VENA+ HG++ G + + Sbjct: 453 CIQAYMNIIAIRYENKFIIEIDVDEGLLEMQTPKMILQPIVENAVYHGLERMDQGGRLQV 512 Query: 481 SVA-ECGNRVRIAVRDTGHGIDPKVIERVEA-----------NEMPGNKIGLLNVHHRVK 528 + + + V + DTG G+DP+ + ++A + P IGL N+H+R++ Sbjct: 513 TGSIDAHGDVCFQITDTGKGMDPEQLASLQAKLGMASPEPAPDGQPATSIGLSNIHNRLR 572 Query: 529 LLYGEGLHI---RRLEPGTEIAFYI 550 LL+GEG I ++ GT + I Sbjct: 573 LLFGEGYGIAIESQIGHGTTVTVRI 597 >UniRef50_UPI0001C356D2 putative sensor with HAMP domain n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C356D2 Length = 601 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 71/240 (29%), Positives = 127/240 (52%), Gaps = 18/240 (7%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 I + M+ +S ++ T++E + E++ LQ++INPHFL+N L++I Sbjct: 368 IGRQINHMSGHISTLLETRVENEKE------KKDMEIKMLQAQINPHFLYNTLDSIKWIA 421 Query: 385 RLNPDT-ARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 + ++ ++ LS L+ N+ +E++ +++EL +++Y+ IE+ R+ + + Sbjct: 422 TMQKNSGIVSVVTALSSLLK-NMAKGFNEKVTLRQELDFLQNYVIIEKIRYIELFDIDII 480 Query: 444 IDEE--VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGID 501 +++E + I L +QP+VENAI GI+P G++TI V + I+V D G GI Sbjct: 481 VEQEELYDARIIKLTLQPIVENAIFSGIEPSGRTGLITIRVWVKSGVLHISVTDNGIGIS 540 Query: 502 PKVIERVEANEMPGN-----KIGLLNVHHRVKLLYGE--GLHIRR-LEPGTEIAFYIPNQ 553 P+ IE++ + IGL NV R KL+YGE GL I ++ T I +P + Sbjct: 541 PENIEKLLTDTSRITRSNMSGIGLPNVDRRFKLVYGEDYGLTIESVVDQYTTITITLPLE 600 >UniRef50_B0K233 Integral membrane sensor signal transduction histidine kinase n=10 Tax=Thermoanaerobacterales RepID=B0K233_THEPX Length = 502 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 74/255 (29%), Positives = 134/255 (52%), Gaps = 26/255 (10%) Query: 325 ITSSLQEMAVGLSQII---STQLEVSRAEQLREM--------ANKAELRALQSKINPHFL 373 + + +M V + I Q EV + + +EM +AEL+ALQS+INPHFL Sbjct: 243 LAEAFNKMVVSIKNYIGEIKNQAEVEKKLKEQEMQNLKMRNILKEAELKALQSQINPHFL 302 Query: 374 FNALNAISSSIRLN-PDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQA 432 FN LNA + + D + + I N++ RYN++ K D + ++ E+ +K Y+ I + Sbjct: 303 FNTLNAAAQLAMMEGADKSSEFIENVANLFRYNLK-KLDTTVTLQDEINNVKTYMYILKT 361 Query: 433 RFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRI 491 RFGD++ D+DE ++ +P +IQP+VENA +HG++ + G + ++V + ++V I Sbjct: 362 RFGDRVDFKVDVDEGVLDVEMPCTIIQPVVENAFIHGLEDTEKGGFIKLAVKKDNDKVLI 421 Query: 492 AVRDTGHGIDPKVIERVEANEMPG------NKIGLLNVHHRVKLLYGEG-----LHI-RR 539 V D G G+ + + + + + IG+ N+ +R++L Y + I + Sbjct: 422 EVIDNGIGMSEEKVRAILSADNEDLSKRHVTGIGMHNIINRLRLFYNTSAIEDVIEIDSK 481 Query: 540 LEPGTEIAFYIPNQR 554 + GT++ IP + Sbjct: 482 IGEGTKVTLKIPLMK 496 >UniRef50_C4G6T4 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G6T4_ABIDE Length = 593 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 70/245 (28%), Positives = 124/245 (50%), Gaps = 20/245 (8%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSS 383 ++ + +++++ + Q + + E + LQS++NPHFL+N L+AI+ Sbjct: 346 KLNRIFNKAIKEINELMQ------KVTQSEILNKEMEFKTLQSQMNPHFLYNTLDAINWL 399 Query: 384 IRLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIY 442 L+ +S +R +I K I I++EL +K+YI I+ R+ D+ IY Sbjct: 400 AFKEKQTEICNLVAAISSLIRASISNK-KSIITIEQELDYVKNYIYIQHIRYKDRFDTIY 458 Query: 443 DIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGID 501 DIDE + +P L+IQP+VENAI+HGI+ K K ++ IS+ + I V+DTG G+ Sbjct: 459 DIDESLLKQAVPKLIIQPIVENAIIHGIENSKNKNLLYISIKRENECIVIIVKDTGIGMT 518 Query: 502 PKVIERVEANEMPGNK--------IGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYI 550 + + + + +GL VH R++L+YG+ + + GT + +I Sbjct: 519 DEKVSELLKEPLNAEGDEQKAHTNLGLYAVHKRIQLMYGDLYGLAVHSQAGEGTTVTLHI 578 Query: 551 PNQRT 555 P + Sbjct: 579 PFAKK 583 >UniRef50_A9U6T1 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U6T1_PHYPA Length = 717 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 80/214 (37%), Positives = 126/214 (58%), Gaps = 6/214 (2%) Query: 333 AVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTAR 392 A L + T LE+ R+ + AE+ LQ++I PHFL+NALN + + + ++P+ Sbjct: 507 AEELRARVRTLLELRRSVRNAIS---AEMAFLQAQIKPHFLYNALNTMIALLPIDPEKTA 563 Query: 393 QLIFNLSRYLRYNIELKDDEQID-IKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCC 451 +L+ LSRYLR + + ++ +Q+ +++E+ + Y+ +E+ARF D+L V YDI ++N Sbjct: 564 ELLHELSRYLRGSFDFRNRDQLTVLRQEMALVTSYLNLEKARFEDRLQVDYDIQADMNRL 623 Query: 452 IPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN 511 +P L IQP+VENA+ HGI + G V I V E R+ I V D G G+ P+ +E V Sbjct: 624 VPPLTIQPIVENAVRHGIMRKEEGGRVRILVQELEERLEITVEDNGTGMTPERMEAVREG 683 Query: 512 EMPGNKIGLLNVHHRVKLLYGEGLHIRR-LEPGT 544 GN +GL N++ R+ L+G L I E GT Sbjct: 684 RA-GNGVGLKNINARLLTLFGTELMIDSDPERGT 716 >UniRef50_B8FP92 Sensor protein n=1 Tax=Desulfitobacterium hafniense DCB-2 RepID=B8FP92_DESHD Length = 1016 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 79/209 (37%), Positives = 120/209 (57%), Gaps = 5/209 (2%) Query: 346 VSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYN 405 + + +Q A KAE+ LQS+I PHFLFNALNAI + + A QLI +LS YLR Sbjct: 805 LLQLKQSVAAALKAEMDFLQSQIKPHFLFNALNAIITLCGTDGLRAEQLITHLSYYLRRC 864 Query: 406 IELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDE-EVNCCIPSLLIQPLVENA 464 E + D + ++ EL ++ Y+ IE+ARF D+LTV+Y++D + I L IQPLVENA Sbjct: 865 FEPRTDSFLLLQDELRLVEAYVEIEKARFEDRLTVLYEVDPGALLKRILPLTIQPLVENA 924 Query: 465 IVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV---EANEMPGNKIGLL 521 I HG+ + G + +++ G+RV + V D G GI + ++ + + + +GL Sbjct: 925 IRHGVMKREEGGTIRLTIQLAGDRVHVEVWDNGVGIREEQLKNLWLSDNSSSERRGVGLA 984 Query: 522 NVHHRVKLLYGEGLHI-RRLEPGTEIAFY 549 N+ R+K GE LH+ R T++ F Sbjct: 985 NIQRRLKHFCGEELHVTSREGEWTKVQFC 1013 Score = 55.9 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 73/192 (38%), Gaps = 29/192 (15%) Query: 377 LNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQ---IDIKKELYQIKDYIAIEQAR 433 L I + R R I +L + R + + E + + +K I ++ R Sbjct: 471 LAVIRDTSRKLSALVRD-ILDLDKIKRNELTVHPAEVDVRVTVSLVFDLLKHLITAKKIR 529 Query: 434 FGDK----LTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRV 489 ++ L +Y + + I +L V NA+ G + IS N V Sbjct: 530 LINRVPEDLPFVYADENRLRQIIHNL-----VGNAMKF-----TSAGTIAISAQVLENHV 579 Query: 490 RIAVRDTGHGIDPKVIERV--------EANEMPGNKIGLLNVHHRVKLLYGEGLHI--RR 539 +I V DTG GI P + V NE G +GL + ++ + ++I Sbjct: 580 KIMVEDTGVGIAPSDWDTVFQLFEQAHSPNEYGGTGLGLF-ICRKLVQMMDGEIYIDWSE 638 Query: 540 LEPGTEIAFYIP 551 E GT IAF +P Sbjct: 639 PERGTRIAFTLP 650 >UniRef50_C6IXM7 Histidine kinase internal region n=2 Tax=Paenibacillus RepID=C6IXM7_9BACL Length = 609 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 81/238 (34%), Positives = 130/238 (54%), Gaps = 18/238 (7%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISS-S 383 ++ M + +I+ + ++ E A L+AL+++INPHFL+NAL AIS+ + Sbjct: 374 LSRHFNRMVRRTNDLINERYKMKLVE------KNAILKALEAEINPHFLYNALQAISTKA 427 Query: 384 IRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 ++ D ++ L+ LRY I KD ++ ++EL I+ Y+A+++ARFG +L V + Sbjct: 428 LKSGDDEVADMVDALALTLRYCISGKD--IVNAREELKHIERYLALQKARFGSRLQVTVE 485 Query: 444 IDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 +E + IP L IQ LVEN+I HG++ + I I+V D G GI P Sbjct: 486 WEEALKELQIPKLSIQSLVENSIKHGLEKMSSGISIRIRAELGDTHAVISVSDNGPGISP 545 Query: 503 KVIERVEA------NEMPGNKIGLLNVHHRVKLLYGE--GLHIRRLEPGTEIAFYIPN 552 + +E+++A E G IGL N++ R+KLLYG+ L I+ E GTE+ IP Sbjct: 546 EQMEQIQASFLQDWEEQEGENIGLKNLYTRLKLLYGKEAELRIQSDEHGTEMCMLIPR 603 >UniRef50_C6CWF5 Putative sensor with HAMP domain n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWF5_PAESJ Length = 491 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 78/250 (31%), Positives = 127/250 (50%), Gaps = 18/250 (7%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 ++ + + M L+ ++ E +E+L + EL+ALQS+INPHFLFN LN +S Sbjct: 232 LSEAFRHMIKDLNDLMGRDKERMESERL---VKELELQALQSQINPHFLFNTLNVLSKLA 288 Query: 385 RLN-PDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 L D LI ++S+ +RYN+ + D + + EL +++Y I+QARF +++ Sbjct: 289 LLEGADRTSDLIVSMSKLIRYNLS-QLDRPVTLGDELKHVREYFTIQQARFRNRVETRQQ 347 Query: 444 IDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 IDE ++ IP+L IQPLVENA VHG++ + G++ + + G V I +RD G G+ Sbjct: 348 IDESVLDMLIPALTIQPLVENAFVHGVERMESGGIIQLVMERAGENVSIVIRDNGAGMTM 407 Query: 503 KVIERVEANEMPGN---------KIGLLNVHHRVKLLYGEG--LHIRR-LEPGTEIAFYI 550 + + + + P G NV R++L Y + I GT + + Sbjct: 408 EESNALLSLQEPAQPAPAKKNSMGFGTRNVIKRLRLFYNRRDVVSIESEPGRGTSVILLL 467 Query: 551 PNQRTPVASQ 560 PN A Q Sbjct: 468 PNPSDAGAEQ 477 >UniRef50_C6CV50 Sensor protein n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CV50_PAESJ Length = 1112 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 76/228 (33%), Positives = 126/228 (55%), Gaps = 2/228 (0%) Query: 337 SQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIF 396 ++++ + + ++ E A + E LQS+I PHF++NAL+ I S + A +L+ Sbjct: 880 KELLARVQTLLQMKEAVEQAIRMETLFLQSQIKPHFVYNALSGIISLCYSDGARAGKLLG 939 Query: 397 NLSRYLRYNIELKDDE-QIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSL 455 S YLR + +L ++ + +EL K Y+ +EQARFG++L V +++ +P+L Sbjct: 940 EFSNYLRLSFDLDPRHAKVSLNRELSLTKSYVELEQARFGERLHVEWEVGAPTETLVPAL 999 Query: 456 LIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPG 515 ++QPLVENAI HG+ G V I ++I+V+D G G++P ++R+ E G Sbjct: 1000 ILQPLVENAIRHGVMKRLSGGNVVIRAKLVQYGLQISVQDDGVGMNPDQLDRMFKTERMG 1059 Query: 516 NKIGLLNVHHRVKLLYGEGLHIRRL-EPGTEIAFYIPNQRTPVASQAT 562 IGL+NVH R+ +G+GL I + GT +AF IP + V Sbjct: 1060 GSIGLINVHKRLINEFGQGLRIESVQGKGTTVAFRIPFRMQVVELDGE 1107 >UniRef50_C7II18 Putative sensor with HAMP domain n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7II18_9CLOT Length = 593 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 71/238 (29%), Positives = 121/238 (50%), Gaps = 18/238 (7%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSS 383 Q++ +M ++++I + + +Q +AEL++L+ +INPHF +N L I+ Sbjct: 353 QLSRDFNKMVQNINELIQRVYDETLLKQ------QAELKSLRMQINPHFFYNTLETINWM 406 Query: 384 IRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIY 442 R+N + + +R I + I I EL + +YI+I++ R+ DKL+V Sbjct: 407 ARINGVTEIGVVAKAMGELMRLTI--GGSDFIKICDELKSVSNYISIQKYRYDDKLSVSM 464 Query: 443 DIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGID 501 DI+EE+ IP L++QP++EN+IVHGI G + I + V V D G GI Sbjct: 465 DINEELYELYIPKLILQPIIENSIVHGILNKASGGHIEIRGRLISDIVEFTVNDNGVGIH 524 Query: 502 PKVIERVEAN-----EMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIP 551 P+ ++ + N E +G+ NV R+K+ YGE + R+ GT++ P Sbjct: 525 PERLKDILENKFDTFEDDHTHVGVNNVDRRLKIYYGEKYGVQIKSRVGVGTDVIIRFP 582 >UniRef50_Q2RGN3 Histidine kinase n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RGN3_MOOTA Length = 607 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 74/262 (28%), Positives = 137/262 (52%), Gaps = 12/262 (4%) Query: 302 VIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAEL 361 V+ L + V G L Q+ + L Q S + R QL + AEL Sbjct: 344 VLSLTDLEAVCGLLSFVSGQIMQLNTVLLVNKELEDQQASFIHFLKRQHQLEQALKDAEL 403 Query: 362 RALQSKINPHFLFNALNAISSSIRLN-PDTARQLIFNLSRYLRYNIELKDDEQIDIKKEL 420 +ALQS++NPHFLFN+LN ++ L +++ L+R +RY++ + + + +E+ Sbjct: 404 KALQSQVNPHFLFNSLNTVARLALLEGAANTEKMVRALARLMRYSL-YQVKGTVSLAEEI 462 Query: 421 YQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVT 479 ++DY+ I++ RF D++ ++E + +P +++QPLVENAI+HG++P + G +T Sbjct: 463 AAVRDYLFIQETRFSDRVRSRVKVEEAAMQARLPCMVLQPLVENAIIHGLEPKEEGGEIT 522 Query: 480 ISVAECGNRVRIAVRDTGHGIDPKV------IERVEANEMPGNKIGLLNVHHRVKLLYGE 533 +S G++VR+ ++D G GI P+V +E + + + +G++NV+ R++ +G Sbjct: 523 VSARLVGDQVRVEIKDDGVGIPPEVKKAIFDLEVRRSGKGQVSGLGIVNVYRRLQHHFGS 582 Query: 534 GLHI---RRLEPGTEIAFYIPN 552 + GT + P Sbjct: 583 NCALDVASMPGKGTCVQLTFPY 604 >UniRef50_C5EHK2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C5EHK2_9FIRM Length = 606 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 71/254 (27%), Positives = 132/254 (51%), Gaps = 13/254 (5%) Query: 308 KGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSR-AEQLREMANKAELRALQS 366 G + + I+ ++I+ ++A + +++T E + ++ +AE+RAL++ Sbjct: 341 GGKLNAKVGIHRDEKNEIS----QIATHFNIMMNTVNEQMQMVKESGVREKEAEIRALEA 396 Query: 367 KINPHFLFNALNAISSS-IRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKD 425 +INPHF++N L++I+ I + ++ ++ LRY I+ + ++ + I +EL ++ Sbjct: 397 QINPHFIYNTLDSINWLAIENDQKEISSMLSKFAQILRYQIQ-QSNQIVMISEELSYLER 455 Query: 426 YIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAE 484 Y+ +++ RF D + + E V C I ++ QP +ENAI+HG+ + G++ + + E Sbjct: 456 YLYLQKVRFMDSFEYVIECQESVKTCKIHKMIFQPFIENAILHGMADVEHGGLLKVQIRE 515 Query: 485 CG-NRVRIAVRDTGHGIDPKVIERVEANEM-PGNKIGLLNVHHRVKLLYGEGLHI---RR 539 R+ + D G G+ + I+ V M PGN IG+LNV R+ L YG I Sbjct: 516 QDEERLAFIISDNGLGMSKEQIDAVFVRRMNPGNSIGVLNVLARLDLYYGTAYSIHVESG 575 Query: 540 LEPGTEIAFYIPNQ 553 GT I IP Q Sbjct: 576 EGKGTTIETVIPRQ 589 >UniRef50_C6LB64 Putative HAMP domain protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LB64_9FIRM Length = 601 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 73/245 (29%), Positives = 125/245 (51%), Gaps = 17/245 (6%) Query: 316 KIYYCHAHQIT---SSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHF 372 KI Y + + L++M+ + +I EV + + E++AL +++NPHF Sbjct: 366 KIEYEDSDEFAFFYQKLEKMSNDIGNLIHENYEV------KLIQKDTEVKALNAQLNPHF 419 Query: 373 LFNALNAISSSI-RLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQ 431 ++N LN I+ + N + Q++ NLSR L Y + ++ + ++ +K Y+ I Q Sbjct: 420 IYNTLNIINWTCLEGNLEATSQMLVNLSRMLHYTSHHEGLYEL-LGNDIAWLKRYLYIMQ 478 Query: 432 ARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVR 490 RF DK VI DI +E+ +P L +QP VEN IVHG + + KG++ I + N V Sbjct: 479 IRFADKFDVILDIPQELMELKVPKLFLQPFVENVIVHGFKEMQEKGLLEIHAEQEENTVV 538 Query: 491 IAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIR---RLEPGTEIA 547 V D G G+ + I+ + IG+ NV+ R+++LYG+ + ++ GT + Sbjct: 539 FYVEDNGCGMTAEKIQDIMNGNPD--SIGIANVNQRIRILYGQEYGVEYHSQIGEGTCVM 596 Query: 548 FYIPN 552 IP Sbjct: 597 IRIPK 601 >UniRef50_Q5WBZ1 Two-component sensor histidine kinase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WBZ1_BACSK Length = 577 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 71/245 (28%), Positives = 127/245 (51%), Gaps = 9/245 (3%) Query: 316 KIYYCHAHQITSSLQEMAVGLSQIISTQLE-VSRAEQLREMANKAELRALQSKINPHFLF 374 + ++ L ++A+G + ++ E +++ Q AE++ALQ+++NPHF++ Sbjct: 333 EFHHRMNRSSKDELGQLAIGFNHMMKQINELIAKVYQTEIREKDAEIKALQTQMNPHFIY 392 Query: 375 NALNAISSS-IRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQAR 433 N L I+ I ++ +L R +RY+I+ K + +++EL ++ YI I+Q R Sbjct: 393 NTLEHINMMAITKQAYELSDMVASLGRLIRYSIDQK-TRFVPLREELAFVESYITIQQKR 451 Query: 434 FGDKLTVIYDIDEEVNCC-IPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIA 492 K+T + E + IP L++QPL+ENAI HG Q + G ++I + I Sbjct: 452 LEGKVTFSIAVPEAMRSLSIPKLILQPLIENAIEHGHQHGEWPGEISIKGWQDDAYSYIE 511 Query: 493 VRDTGHGIDPKVIERVEANEMP--GNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIA 547 VRD+G G+ + IER++ GN++ L N+ R+ LL GE + L GT++ Sbjct: 512 VRDSGQGMKQETIERMKEEPERGAGNQVALGNISERLLLLLGEQARLMIDSELGRGTKVT 571 Query: 548 FYIPN 552 +P Sbjct: 572 VRLPK 576 >UniRef50_C0D790 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D790_9CLOT Length = 339 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 78/258 (30%), Positives = 125/258 (48%), Gaps = 38/258 (14%) Query: 318 YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNAL 377 Y Q EM + R+ + +AE ALQ++INPHFL+N L Sbjct: 92 YTPENEQAIRKFNEM-------------IDRSNLVNVSKKQAEYLALQNQINPHFLYNTL 138 Query: 378 NAISSSIRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGD 436 I S + D+ ++ L+ + RY I + + + ++ EL I++Y I+Q RFGD Sbjct: 139 EGIRSEALIAGLDSVAEMTEALATFFRYTIS-QVENLVPLEDELANIENYYYIQQFRFGD 197 Query: 437 KL--TVIYDIDEE------VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNR 488 KL ++ YD DE+ + +P L +QP+VEN+I HGI+ GKG +TI + +R Sbjct: 198 KLALSIEYDCDEDASELDILQYRLPKLTLQPIVENSIYHGIERKIGKGHLTIRIGASDSR 257 Query: 489 VRIAVRDTGHGIDPKVIERV------------EANEMPGNKIGLLNVHHRVKLLYGEGLH 536 +RI V D G G+ + ++ E I ++NV++R+KLL+GE Sbjct: 258 LRIRVSDDGLGMAEDKLHQLNEKLKSLFLDAVEGESSRQGGIAMVNVNNRIKLLFGEEYG 317 Query: 537 I---RRLEPGTEIAFYIP 551 I GT++ +P Sbjct: 318 ICVYSHEGAGTDVLINLP 335 >UniRef50_Q2S4J4 Histidine kinase family n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S4J4_SALRD Length = 379 Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats. Identities = 74/245 (30%), Positives = 131/245 (53%), Gaps = 17/245 (6%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQLR----EMANKAELRALQSKINPHFLFNALNA 379 +T + + A L ++ + + E+ MA + +L AL++++NPHFLFN LN+ Sbjct: 142 NLTVYIIQFA--LYHLVRNVQRLRQKERQATEFLAMAREQQLAALKAQVNPHFLFNTLNS 199 Query: 380 ISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLT 439 IS+++R +P+ AR++I LS +RY +E D E + +++E+ + Y+ +E+ RF D+L Sbjct: 200 ISATLRQDPERAREMIAKLSDMMRYALEGPDREFVPLREEIAFTRRYLDLERHRFSDRLR 259 Query: 440 VIYDID---EEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 D+D + ++ +P +++QPLVENA+ HGI P + G VT++V + + + V DT Sbjct: 260 ARMDVDADTDALDTPVPPMVLQPLVENALRHGIAPSEDGGSVTVAVTAEHDTLDVHVEDT 319 Query: 497 GHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQ 553 G G D + + GL R++ YG + R G ++ F IP Sbjct: 320 GVGPDAD-----DPLSGSTDGTGLATTSTRLERTYGPDAALHTARNDPTGFKVWFSIPRN 374 Query: 554 RTPVA 558 T + Sbjct: 375 GTADS 379 >UniRef50_UPI0001788A7F integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788A7F Length = 606 Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats. Identities = 70/242 (28%), Positives = 128/242 (52%), Gaps = 18/242 (7%) Query: 327 SSLQEMAVGLSQIISTQLEVSRAEQLRE-MANKAELRALQSKINPHFLFNALNAISSSIR 385 + ++ + +++ S ++++ +L E + +A++ ALQ +INPHFL+N L++I Sbjct: 343 DEVGQLIISYNRLSSRIVKLTDEVKLNESLKKEADMHALQVQINPHFLYNTLSSIHWLAL 402 Query: 386 LNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDI 444 +N D +++ +LS +LR+++ E I++E+ ++ Y+ I+ R+ DK + Sbjct: 403 MNQDVKIAEMVGSLSDFLRFSLN-NGQEYCTIQQEIMHVRHYVNIQTIRYPDKFEFKDLV 461 Query: 445 DEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPK 503 +E++ + LL+QPLVEN+++HGI G G +TI +R V D G G+ + Sbjct: 462 EEDLYQHTMLKLLLQPLVENSMLHGILSRDGVGTITIRGHREPEGIRFVVEDDGIGMTAE 521 Query: 504 VIE-----------RVEANEMPGNKIGLLNVHHRVKLLYGE--GLHIRRLEP-GTEIAFY 549 ++ + E + P GL NVH R+ L YG+ GL + E GT + F Sbjct: 522 RLKWLQEQLVENPLQYEKGQTPRGSYGLRNVHKRLLLHYGKDAGLRVESTEGTGTRVMFT 581 Query: 550 IP 551 IP Sbjct: 582 IP 583 >UniRef50_C6CVD9 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVD9_PAESJ Length = 481 Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats. Identities = 76/266 (28%), Positives = 144/266 (54%), Gaps = 20/266 (7%) Query: 308 KGVVTGTLKIYYCHAHQ-ITSSLQEMAVGLSQIIST-----QLEVSRAEQLREMANKAEL 361 +G ++IY + + M + ++ +IS QLE S ++ + + +++L Sbjct: 216 RGRFDTHIEIYANDEISFLAKTFDRMRININNLISEIQTKAQLE-SELQKNKLLLQESQL 274 Query: 362 RALQSKINPHFLFNALNAISSSIRLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKEL 420 R+LQS+INPHFLFN L+ +S L L+ +++R LRYN++ + D + + +E+ Sbjct: 275 RSLQSQINPHFLFNTLDTLSKKAYLEGSLETSDLLTSVARLLRYNLK-RLDRPVTLYEEV 333 Query: 421 YQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVT 479 +++YI I++ RF ++L + ++DE+ ++ IP L IQP++ENA++H I+P + G +T Sbjct: 334 RVLREYIFIQKTRFTERLRFVEEVDEDCLHVQIPGLTIQPIIENAVIHAIEPLEDGGTIT 393 Query: 480 ISVAECGNRVRIAVRDTGHGIDPKVIERV-------EANEMPGNKIGLLNVHHRVKLLYG 532 V + G+ + I + D G GI + I + + + IG NV +R++L YG Sbjct: 394 FRVRDEGSEIMIEIEDEGSGISEEKISHIMEDRFASQEGDGHSTGIGFGNVINRLRLYYG 453 Query: 533 EGLHI---RRLEPGTEIAFYIPNQRT 555 + + GT++ +P +R Sbjct: 454 REDVMAIQSEVGKGTKVILKLPKERE 479 >UniRef50_C6CT82 Signal transduction histidine kinase, LytS n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CT82_PAESJ Length = 596 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 76/257 (29%), Positives = 128/257 (49%), Gaps = 19/257 (7%) Query: 319 YCHAHQITSSLQEMAVGLSQIISTQLEVS-RAEQLREMANKAELRALQSKINPHFLFNAL 377 Y + + L M + + + LE + R K+EL L+S+INPHFL+N L Sbjct: 342 YMEISIVATELNSMLDEIDHLTQSLLETNTRLYSTELEKKKSELAFLRSQINPHFLYNTL 401 Query: 378 NAISS-SIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGD 436 AI+ ++ D + + +LS RY+I K ++ + +E+ + YI I+Q RF Sbjct: 402 EAITGIAVVEGQDKIKTMTRSLSSIFRYSI--KGSSEVPLSEEIRMVDSYIRIQQIRFEG 459 Query: 437 KLTVIYDI-DEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGN-RVRIAVR 494 + V Y++ D+ + +P +++QP+ ENAI HG +P KG + I A G+ ++ + V Sbjct: 460 RFDVQYELTDDAMAFRVPKMILQPIAENAIYHGFEPTLKKGRLWIRGAVSGDGQLIVQVE 519 Query: 495 DTGHGIDPKVIERVE----------ANEMPGNKIGLLNVHHRVKLLYGE--GLHIRR-LE 541 D G GI+P +E + IGL+NV++R++L++G GL + Sbjct: 520 DDGVGIEPARLEELRLMMSATSSGPEEHGESKSIGLVNVNNRIRLMFGGDCGLRVDSGAG 579 Query: 542 PGTEIAFYIPNQRTPVA 558 GT + I R P A Sbjct: 580 SGTRVELIIGEGRAPDA 596 >UniRef50_C5ES67 Histidine kinase internal region n=3 Tax=Clostridiales RepID=C5ES67_9FIRM Length = 516 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 74/251 (29%), Positives = 127/251 (50%), Gaps = 22/251 (8%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQ-----------LREMANKAELRALQSKINPHF 372 ++ + +M I+T E + + + + + A L L+S+INPHF Sbjct: 256 ELVQAFNKMKHATEGHINTLKEKNEIAERLHKEELGRIEMEKRLDAARLELLKSQINPHF 315 Query: 373 LFNALNAISSSIRLN-PDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQ 431 LFN LN I+ +L DT ++I ++S RYN++ ++ + + +EL +KDY+ I+Q Sbjct: 316 LFNTLNMIACMAKLEEADTTERMISSMSSLFRYNLKTS-EQIVPLAQELKVVKDYMYIQQ 374 Query: 432 ARFGDKLTVI--YDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRV 489 RFG ++ ++DEE IP+ +QP+VENAI+HG+ + G + + V + ++V Sbjct: 375 MRFGSRIAYDCQLEVDEE-ETIIPAFTLQPIVENAIIHGLSKKEQGGKILLRVWKKEDKV 433 Query: 490 RIAVRDTGHGIDPKVIERVEANEMPGN----KIGLLNVHHRVKLLYGEG-LHIRRLEP-G 543 I+V DTG G+ + + + G IGL N+ HR+ +Y G I E G Sbjct: 434 IISVADTGVGMSQERLMELRTALNAGGTARVGIGLGNICHRIHAMYRNGDFRIYSSEGNG 493 Query: 544 TEIAFYIPNQR 554 T + +P Sbjct: 494 TVVQVIVPQDE 504 >UniRef50_D1PPK9 Putative two-component sensor histidine kinase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPK9_9FIRM Length = 661 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 67/249 (26%), Positives = 124/249 (49%), Gaps = 25/249 (10%) Query: 319 YCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALN 378 + ++T S +M + L ++ + E+ ++ ++AE++ALQS+INPHF+ N LN Sbjct: 405 HQELRRLTDSFNQMVLSLKNML------AINEEAQKRKHQAEIQALQSQINPHFIVNTLN 458 Query: 379 AISSSIRLNP-DTARQLIFNLSRY----LRYNIELKDDEQIDIKKELYQIKDYIAIEQAR 433 +I +++ D R++ L+ R + +++EL + Y+ I + R Sbjct: 459 SIRFMAQMSGYDGIRRMAQALASIVSCSFRSSTS-----FYTVREELEMLDSYLYIMRIR 513 Query: 434 FGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPC-KGKGVVTISVAECGNRVRI 491 + D V Y++ +E C +P L +QP+VENA+ HG + G + I A + + + Sbjct: 514 YADGFEVRYEVADECRACRLPRLTLQPIVENALNHGFADLGEELGQLVIRAAREADALVL 573 Query: 492 AVRDTGHGIDPKVIERVEAN----EMPGNKIGLLNVHHRVKLLYG--EGLHIRRL-EPGT 544 V D G G+D ++ + + E G+ IG+ NV R++L +G GL I GT Sbjct: 574 EVTDNGCGMDAATVKAILHDTLPREQSGSSIGIQNVLARLRLHFGGAAGLQIDSTPGRGT 633 Query: 545 EIAFYIPNQ 553 + +P + Sbjct: 634 CVRLALPWE 642 >UniRef50_C0C5Z3 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C5Z3_9CLOT Length = 248 Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats. Identities = 76/243 (31%), Positives = 123/243 (50%), Gaps = 20/243 (8%) Query: 328 SLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLN 387 + Q L + +S + E+ + ++L ALQS+INPHFL+N L +I + L+ Sbjct: 2 TFQTQLDELLYLYKKHYMISYRKD--ELNSSSQLMALQSQINPHFLYNTLESIRAQAELD 59 Query: 388 PD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDE 446 ++ L+ Y RYNI D + ++ EL I +Y+ I+Q RFG++ ++ + ID Sbjct: 60 DALQISEMTEALAAYFRYNINRGGD-VVPLEDELANISNYLHIQQFRFGERFSISFMIDG 118 Query: 447 EVNCC----IPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 + N IP L IQP+VENAI HG++ G +TI V E R+ +++ D G GID Sbjct: 119 DRNTINNQAIPKLTIQPIVENAIYHGLEETLTSGKITIRVTETEKRILLSISDNGKGIDY 178 Query: 503 KVIERVE---------ANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYI 550 + +E + + I L N+H R++LL+G+ I GT + + Sbjct: 179 EQLEMIHRDLQADTSASGSERTTGIALSNIHRRIQLLFGDSFGIALESTPMVGTTVHITM 238 Query: 551 PNQ 553 P Q Sbjct: 239 PKQ 241 >UniRef50_A5ZT84 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZT84_9FIRM Length = 601 Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 62/253 (24%), Positives = 124/253 (49%), Gaps = 20/253 (7%) Query: 318 YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNAL 377 Y Q+ S M +++++ + ++ +AEL+ L +I PHFL+N L Sbjct: 352 YKGEIGQLGDSFNAMVEKINELLGVVY------KEQKNKREAELKILHEQIKPHFLYNTL 405 Query: 378 NAISSSIRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGD 436 + I + + L+ LS + R ++ + E I +++E+ +K+Y+ I++ R+ D Sbjct: 406 DTIQWMAKQYHAQDIVDLVLALSGFFRISLS-QGKEFITLEQEVLMVKNYLDIQKVRYED 464 Query: 437 KLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCK-GKGVVTISV-AECGNRVRIAV 493 +I+E + N + + +QPLVENA+ HGI+ +G + I +E + + + V Sbjct: 465 LFEYKTEIEEGLGNYMVLKICLQPLVENALYHGIKESDQDRGTIWIRAFSESEDSIILKV 524 Query: 494 RDTGHGIDPKVIERVEA---NEMPGNKI---GLLNVHHRVKLLYGEGLHI---RRLEPGT 544 D G G+ + I+++ + + G ++ G LNV+ R+K+ YG+ + +R GT Sbjct: 525 EDDGAGMSQERIDQLNSWLKLKERGEEVKAYGTLNVNDRIKIAYGDEYGLHYEKRTGGGT 584 Query: 545 EIAFYIPNQRTPV 557 + + V Sbjct: 585 VAVVRLKRLQKEV 597 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AA94 Inner membrane protein ypdA n=114 Tax=Bacteria R... 652 0.0 UniRef50_Q39S58 Histidine kinase internal region n=4 Tax=Bacteri... 605 e-171 UniRef50_Q2RH26 Histidine kinase internal region n=3 Tax=Bacteri... 595 e-168 UniRef50_C9RCQ9 Signal transduction histidine kinase, LytS n=4 T... 589 e-167 UniRef50_A1HTW6 Signal transduction histidine kinase, LytS n=2 T... 582 e-165 UniRef50_A1VG05 Signal transduction histidine kinase, LytS n=4 T... 578 e-163 UniRef50_C0ZI45 Two-component sensor histidine kinase n=1 Tax=Br... 576 e-163 UniRef50_C5VR12 Sensor protein LytS n=1 Tax=Clostridium botulinu... 575 e-162 UniRef50_A8MGZ4 Signal transduction histidine kinase, LytS n=1 T... 567 e-160 UniRef50_B8CWX8 Signal transduction histidine kinase, LytS n=1 T... 565 e-159 UniRef50_UPI0001C42EFA two-component sensor histidine kinase n=1... 562 e-158 UniRef50_A1HSX0 Signal transduction histidine kinase, LytS n=1 T... 558 e-157 UniRef50_Q5WAM1 Two-component sensor histidine kinase n=1 Tax=Ba... 557 e-157 UniRef50_Q3AA02 Sensor histidine kinase n=1 Tax=Carboxydothermus... 545 e-153 UniRef50_C0Z808 Two-component sensor histidine kinase n=1 Tax=Br... 540 e-152 UniRef50_A6TN09 Signal transduction histidine kinase, LytS n=1 T... 537 e-151 UniRef50_A0PY88 Two-component sensor kinase n=2 Tax=Clostridium ... 534 e-150 UniRef50_B8DLB4 Signal transduction histidine kinase, LytS n=2 T... 533 e-150 UniRef50_A8VV76 Signal transduction histidine kinase, LytS n=3 T... 530 e-149 UniRef50_B1YHT0 Signal transduction histidine kinase, LytS n=1 T... 525 e-147 UniRef50_C5TXS9 Signal transduction histidine kinase, LytS n=2 T... 519 e-145 UniRef50_C4XJP3 Sensor protein LytS n=1 Tax=Desulfovibrio magnet... 519 e-145 UniRef50_Q4A009 Sensor protein lytS n=84 Tax=Bacilli RepID=LYTS_... 518 e-145 UniRef50_A4J8Q8 Signal transduction histidine kinase, LytS n=1 T... 518 e-145 UniRef50_A1HLU7 Signal transduction histidine kinase, LytS n=1 T... 518 e-145 UniRef50_Q814J0 Sensor protein lytS n=83 Tax=Bacillaceae RepID=L... 513 e-144 UniRef50_C5ETQ5 Signal transduction histidine kinase n=5 Tax=Clo... 510 e-143 UniRef50_Q5HLG3 Sensor protein lytS n=5 Tax=Staphylococcus epide... 499 e-139 UniRef50_A5VJZ2 Signal transduction histidine kinase, LytS n=13 ... 493 e-137 UniRef50_Q7P590 Autolysin sensor kinase n=10 Tax=Fusobacterium R... 490 e-137 UniRef50_C3WH60 Autolysin sensor kinase n=4 Tax=Fusobacterium Re... 487 e-136 UniRef50_B1IFE5 Sensor histidine kinase n=13 Tax=Clostridium Rep... 486 e-135 UniRef50_Q3DHF4 Sensor histidine kinase n=10 Tax=Streptococcus a... 475 e-132 UniRef50_C0ZBJ5 Two-component sensor histidine kinase n=2 Tax=Ba... 474 e-132 UniRef50_B4UL02 Signal transduction histidine kinase, LytS n=9 T... 473 e-132 UniRef50_P0AD15 Inner membrane protein yehU n=287 Tax=root RepID... 472 e-131 UniRef50_Q8E7H4 Sensor protein lytS n=10 Tax=Streptococcus RepID... 466 e-129 UniRef50_Q8EQQ2 Sensor protein lytS n=1 Tax=Oceanobacillus iheye... 451 e-125 UniRef50_C5CI42 Signal transduction histidine kinase, LytS n=1 T... 450 e-125 UniRef50_B0G7P0 Putative uncharacterized protein n=2 Tax=Clostri... 447 e-124 UniRef50_B7IG85 Regulator of cell autolysis n=1 Tax=Thermosipho ... 446 e-123 UniRef50_A6LJ91 Signal transduction histidine kinase, LytS n=1 T... 436 e-121 UniRef50_Q1QCQ6 Histidine kinase internal region n=1 Tax=Psychro... 434 e-120 UniRef50_A6F874 Putative uncharacterized protein n=2 Tax=Gammapr... 419 e-115 UniRef50_C9R972 Signal transduction histidine kinase, LytS n=1 T... 418 e-115 UniRef50_C9LQU0 Sensor protein LytS n=1 Tax=Dialister invisus DS... 410 e-113 UniRef50_B0TBI2 Sensor protein lyts n=1 Tax=Heliobacterium modes... 408 e-112 UniRef50_Q2RGH9 ATP-binding region, ATPase-like n=2 Tax=Clostrid... 393 e-108 UniRef50_C8VX85 Signal transduction histidine kinase, LytS n=1 T... 391 e-107 UniRef50_Q67QS2 Two-component sensor histidine kinase n=1 Tax=Sy... 377 e-103 UniRef50_B8G277 Signal transduction histidine kinase, LytS n=2 T... 374 e-102 UniRef50_Q3AEC2 Sensor histidine kinase n=2 Tax=Clostridia RepID... 355 3e-96 UniRef50_C8W8F7 Signal transduction histidine kinase, LytS n=3 T... 341 5e-92 UniRef50_A8F4Q3 Signal transduction histidine kinase, LytS n=1 T... 340 6e-92 UniRef50_D0WHA5 Regulatory protein LytS n=2 Tax=Coriobacteriacea... 339 2e-91 UniRef50_C8WPP3 Signal transduction histidine kinase, LytS n=2 T... 338 4e-91 UniRef50_C6WDP3 Signal transduction histidine kinase, LytS n=2 T... 337 9e-91 UniRef50_UPI0001B586EC signal transduction histidine kinase, Lyt... 333 1e-89 UniRef50_B6GAE7 Putative uncharacterized protein n=2 Tax=Collins... 331 4e-89 UniRef50_A4E9X1 Putative uncharacterized protein n=2 Tax=Collins... 330 8e-89 UniRef50_C4FAQ4 Putative uncharacterized protein n=1 Tax=Collins... 328 3e-88 UniRef50_A4E9W6 Putative uncharacterized protein n=1 Tax=Collins... 323 8e-87 UniRef50_D2B6F5 Signal transduction histidine kinase, LytS n=1 T... 316 1e-84 UniRef50_A0JUQ0 Signal transduction histidine kinase, LytS n=8 T... 315 4e-84 UniRef50_Q5YL06 Putative sensor protein n=1 Tax=Aeromonas hydrop... 308 2e-82 UniRef50_A4F5Z4 Sensor kinase, two-component system n=24 Tax=Act... 308 5e-82 UniRef50_C0BEZ4 Putative uncharacterized protein n=3 Tax=Clostri... 303 8e-81 UniRef50_Q65NG8 Putative uncharacterized protein n=2 Tax=Bacillu... 303 8e-81 UniRef50_C6J483 Multi-sensor signal transduction histidine kinas... 296 2e-78 UniRef50_C5EHM0 Histidine kinase internal region n=1 Tax=Clostri... 294 5e-78 UniRef50_A8RMQ3 Putative uncharacterized protein n=1 Tax=Clostri... 293 1e-77 UniRef50_C9NAB2 Signal transduction histidine kinase, LytS n=6 T... 292 3e-77 UniRef50_C0BXS4 Putative uncharacterized protein n=2 Tax=Firmicu... 291 5e-77 UniRef50_A6BKJ8 Putative uncharacterized protein n=3 Tax=Firmicu... 289 2e-76 UniRef50_C6LHP8 Histidine kinase n=2 Tax=Lachnospiraceae RepID=C... 288 3e-76 UniRef50_C6D7S5 Cache sensor signal transduction histidine kinas... 288 3e-76 UniRef50_C5EKG5 Histidine kinase internal region n=1 Tax=Clostri... 288 3e-76 UniRef50_UPI0001789966 multi-sensor signal transduction histidin... 286 2e-75 UniRef50_UPI000178A843 multi-sensor signal transduction histidin... 286 2e-75 UniRef50_A9KK43 Histidine kinase internal region n=1 Tax=Clostri... 286 2e-75 UniRef50_Q893H6 Two-component sensor kinase yesM n=1 Tax=Clostri... 285 3e-75 UniRef50_C6D2L4 Cache sensor signal transduction histidine kinas... 284 6e-75 UniRef50_C7H1K0 Putative sensor histidine kinase n=1 Tax=Faecali... 284 7e-75 UniRef50_A8MKS8 Integral membrane sensor signal transduction his... 283 8e-75 UniRef50_C1I2X2 Multi-sensor signal transduction histidine kinas... 283 9e-75 UniRef50_B0G4V0 Putative uncharacterized protein n=3 Tax=Clostri... 282 2e-74 UniRef50_A6M1Q9 Multi-sensor signal transduction histidine kinas... 282 2e-74 UniRef50_C5EU49 Multi-sensor signal transduction histidine kinas... 282 3e-74 UniRef50_A9KI48 Histidine kinase internal region n=1 Tax=Clostri... 282 4e-74 UniRef50_Q2BFM1 Putative uncharacterized protein n=1 Tax=Bacillu... 282 4e-74 UniRef50_C6CV60 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2... 281 6e-74 UniRef50_B8HZZ4 Putative sensor with HAMP domain n=2 Tax=Clostri... 281 6e-74 UniRef50_D1PQX9 Putative sensor histidine kinase n=1 Tax=Subdoli... 281 6e-74 UniRef50_A9AWB2 Histidine kinase internal region n=1 Tax=Herpeto... 280 8e-74 UniRef50_O31516 Sensor histidine kinase yesM n=2 Tax=Bacillus su... 280 9e-74 UniRef50_C6J7M5 Histidine kinase internal region n=1 Tax=Paeniba... 280 1e-73 UniRef50_A9KIC4 Multi-sensor signal transduction histidine kinas... 280 1e-73 UniRef50_A4XMF9 Integral membrane sensor signal transduction his... 280 1e-73 UniRef50_C5RJU0 Cache sensor signal transduction histidine kinas... 279 2e-73 UniRef50_C0C1J1 Putative uncharacterized protein n=1 Tax=Clostri... 279 2e-73 UniRef50_C4IM92 Multi-sensor signal transduction histidine kinas... 278 5e-73 UniRef50_A4IPA9 Two-component sensor histidine kinase n=5 Tax=Ba... 277 7e-73 UniRef50_A6M1T7 Histidine kinase internal region n=2 Tax=Clostri... 277 8e-73 UniRef50_C6CTF8 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2... 276 1e-72 UniRef50_C9L4P8 Putative two-component sensor histidine kinase n... 276 1e-72 UniRef50_C4GDI5 Putative uncharacterized protein n=1 Tax=Shuttle... 276 1e-72 UniRef50_C6IY77 Integral membrane sensor signal transduction his... 276 2e-72 UniRef50_A8RW55 Putative uncharacterized protein n=1 Tax=Clostri... 276 2e-72 UniRef50_C6IY73 Two-component sensor histidine kinase n=3 Tax=Ba... 276 2e-72 UniRef50_A9KL84 Integral membrane sensor signal transduction his... 275 3e-72 UniRef50_B9Y686 Putative uncharacterized protein n=1 Tax=Holdema... 275 3e-72 UniRef50_C8NE17 Sensor histidine kinase n=2 Tax=Granulicatella R... 275 4e-72 UniRef50_UPI0001789617 integral membrane sensor signal transduct... 275 4e-72 UniRef50_C6CT14 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2... 275 4e-72 UniRef50_C6IVH0 Histidine kinase internal region n=2 Tax=Bacilla... 275 4e-72 UniRef50_B0NX84 Putative uncharacterized protein n=1 Tax=Clostri... 275 5e-72 UniRef50_A6M2F5 Integral membrane sensor signal transduction his... 273 1e-71 UniRef50_C6LLN0 Putative sensor histidine kinase n=1 Tax=Bryante... 273 1e-71 UniRef50_Q9KB25 BH2110 protein n=2 Tax=Bacillus RepID=Q9KB25_BACHD 273 1e-71 UniRef50_C6CSY1 Histidine kinase n=2 Tax=Paenibacillus RepID=C6C... 273 1e-71 UniRef50_B9MLE3 Putative sensor with HAMP domain n=1 Tax=Anaeroc... 272 3e-71 UniRef50_C2KZS6 Two-component sensor histidine kinase n=1 Tax=Or... 271 4e-71 UniRef50_C5EPF7 Periplasmic sensor signal transduction histidine... 271 4e-71 UniRef50_B1R1H8 Two-component sensor histidine kinase YesM n=2 T... 271 5e-71 UniRef50_C6D6B6 Putative sensor with HAMP domain n=1 Tax=Paeniba... 271 5e-71 UniRef50_C6LBC4 Sensor histidine kinase n=1 Tax=Bryantella forma... 271 6e-71 UniRef50_C6IZN7 Integral membrane sensor signal transduction his... 270 9e-71 UniRef50_UPI0001788F16 integral membrane sensor signal transduct... 270 1e-70 UniRef50_A5ZVU7 Putative uncharacterized protein n=1 Tax=Ruminoc... 270 1e-70 UniRef50_UPI0001788A19 integral membrane sensor signal transduct... 270 1e-70 UniRef50_Q9K6Q0 Two-component sensor histidine kinase n=2 Tax=Ba... 270 1e-70 UniRef50_C5RG15 Putative sensor with HAMP domain n=1 Tax=Clostri... 270 1e-70 UniRef50_UPI0001973B3A histidine kinase n=1 Tax=Clostridium sp. ... 270 1e-70 UniRef50_B8I0K8 Histidine kinase n=2 Tax=Clostridium RepID=B8I0K... 270 1e-70 UniRef50_C5RJF6 Histidine kinase n=1 Tax=Clostridium cellulovora... 269 3e-70 UniRef50_B8I617 Histidine kinase n=2 Tax=Clostridium RepID=B8I61... 269 3e-70 UniRef50_C5EUN5 Histidine kinase internal region n=4 Tax=Clostri... 268 3e-70 UniRef50_UPI0001C353EA YesM n=2 Tax=Clostridium hathewayi DSM 13... 268 3e-70 UniRef50_A5ZT84 Putative uncharacterized protein n=1 Tax=Ruminoc... 268 3e-70 UniRef50_C5EQZ0 Putative uncharacterized protein n=1 Tax=Clostri... 268 4e-70 UniRef50_C6D4D1 Putative sensor with HAMP domain n=1 Tax=Paeniba... 268 4e-70 UniRef50_UPI0001B9EDED integral membrane sensor signal transduct... 268 4e-70 UniRef50_A7VVZ0 Putative uncharacterized protein n=1 Tax=Clostri... 268 5e-70 UniRef50_C7II18 Putative sensor with HAMP domain n=1 Tax=Clostri... 268 5e-70 UniRef50_A6NTG2 Putative uncharacterized protein n=1 Tax=Bactero... 268 5e-70 UniRef50_C4IBC8 Putative two-component sensor kinase YesM n=1 Ta... 268 6e-70 UniRef50_A9KTC9 Histidine kinase internal region n=3 Tax=cellula... 267 6e-70 UniRef50_Q9KBL7 Two-component sensor histidine kinase n=1 Tax=Ba... 267 7e-70 UniRef50_UPI00016C0712 two-component sensor histidine kinase n=1... 267 9e-70 UniRef50_C6D164 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2... 267 9e-70 UniRef50_C5EE53 Histidine kinase internal region n=1 Tax=Clostri... 267 1e-69 UniRef50_C6JC63 Two-component sensor kinase yesM n=1 Tax=Ruminoc... 266 1e-69 UniRef50_UPI0001788114 integral membrane sensor signal transduct... 266 1e-69 UniRef50_C6J594 Histidine kinase internal region n=2 Tax=Bacilla... 266 1e-69 UniRef50_C6IXH6 Histidine kinase internal region n=2 Tax=Bacilla... 266 1e-69 UniRef50_C4G6T4 Putative uncharacterized protein n=1 Tax=Abiotro... 266 2e-69 UniRef50_A5ZM24 Putative uncharacterized protein n=1 Tax=Ruminoc... 266 2e-69 UniRef50_A8RTG8 Putative uncharacterized protein n=1 Tax=Clostri... 266 2e-69 UniRef50_C6D353 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2... 266 2e-69 UniRef50_C6IYJ6 Predicted protein n=1 Tax=Paenibacillus sp. oral... 265 4e-69 UniRef50_UPI0001787F84 integral membrane sensor signal transduct... 265 4e-69 UniRef50_A6LST6 Histidine kinase internal region n=4 Tax=Clostri... 265 4e-69 UniRef50_UPI0001788487 integral membrane sensor signal transduct... 265 4e-69 UniRef50_A5ZVI8 Putative uncharacterized protein n=1 Tax=Ruminoc... 265 5e-69 UniRef50_C5EWK9 Histidine kinase internal region n=1 Tax=Clostri... 265 5e-69 UniRef50_C6D6I3 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2... 264 6e-69 UniRef50_C6JD26 Integral membrane sensor signal transduction his... 264 7e-69 UniRef50_C6IWB4 Histidine kinase internal region n=1 Tax=Paeniba... 264 7e-69 UniRef50_A4XJ72 Integral membrane sensor signal transduction his... 264 8e-69 UniRef50_B6FKZ9 Putative uncharacterized protein n=1 Tax=Clostri... 263 9e-69 UniRef50_C6JDI9 Histidine kinase n=1 Tax=Ruminococcus sp. 5_1_39... 263 1e-68 UniRef50_C6J4K8 Integral membrane sensor signal transduction his... 263 1e-68 UniRef50_C2L0L8 Possible two-component sensor kinase YesM n=1 Ta... 263 1e-68 UniRef50_A9KIW6 Histidine kinase internal region n=1 Tax=Clostri... 263 1e-68 UniRef50_C0D041 Putative uncharacterized protein n=1 Tax=Clostri... 263 1e-68 UniRef50_B9MP60 Signal transduction histidine kinase, LytS n=2 T... 263 2e-68 UniRef50_A1TDT4 Signal transduction histidine kinase, LytS n=9 T... 263 2e-68 UniRef50_A9QDR5 Putative sensor with HAMP domain n=1 Tax=Paeniba... 262 2e-68 UniRef50_A8RNT0 Putative uncharacterized protein n=1 Tax=Clostri... 262 2e-68 UniRef50_UPI0001788A37 integral membrane sensor signal transduct... 262 2e-68 UniRef50_C7GCG8 Putative two-component sensor histidine kinase n... 262 2e-68 UniRef50_C6CV72 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2... 262 3e-68 UniRef50_C6D150 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2... 262 3e-68 UniRef50_C6CWQ5 Putative sensor with HAMP domain n=1 Tax=Paeniba... 262 3e-68 UniRef50_C5EPY4 Two-component sensor kinase yesM n=2 Tax=Clostri... 262 3e-68 UniRef50_C6JDE5 Putative uncharacterized protein n=1 Tax=Ruminoc... 262 3e-68 UniRef50_UPI0001C35A89 histidine kinase n=1 Tax=Clostridium hath... 261 3e-68 UniRef50_A7VR10 Putative uncharacterized protein n=1 Tax=Clostri... 261 4e-68 UniRef50_A6TTD2 Histidine kinase internal region n=1 Tax=Alkalip... 261 4e-68 UniRef50_UPI0001788A7F integral membrane sensor signal transduct... 261 4e-68 UniRef50_A8SSH4 Putative uncharacterized protein n=8 Tax=Clostri... 261 4e-68 UniRef50_A4XFU3 Histidine kinase internal region n=1 Tax=Caldice... 261 5e-68 UniRef50_A7VHF0 Putative uncharacterized protein n=2 Tax=Clostri... 261 5e-68 UniRef50_B8FU12 Signal transduction histidine kinase, LytS n=2 T... 261 5e-68 UniRef50_C6CT65 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2... 261 5e-68 UniRef50_B9Y3V6 Putative uncharacterized protein n=1 Tax=Holdema... 260 7e-68 UniRef50_C7IMD1 Histidine kinase n=1 Tax=Clostridium papyrosolve... 260 8e-68 UniRef50_UPI0001C35C0F integral membrane sensor signal transduct... 260 8e-68 UniRef50_C6CWA9 Putative sensor with HAMP domain n=1 Tax=Paeniba... 260 8e-68 UniRef50_C6LKL4 Putative HAMP domain protein n=1 Tax=Bryantella ... 260 1e-67 UniRef50_UPI0001C356D2 putative sensor with HAMP domain n=1 Tax=... 260 1e-67 UniRef50_A4XMX5 Integral membrane sensor signal transduction his... 260 2e-67 UniRef50_A9U6Q4 Predicted protein n=1 Tax=Physcomitrella patens ... 260 2e-67 UniRef50_C5EPZ3 Histidine kinase internal region n=4 Tax=Clostri... 259 2e-67 UniRef50_C5EHR4 Histidine kinase internal region n=1 Tax=Clostri... 259 2e-67 UniRef50_C4IIT8 Integral membrane sensor signal transduction his... 259 2e-67 UniRef50_C4ZBY3 Putative uncharacterized protein n=6 Tax=Clostri... 259 2e-67 UniRef50_A1HM13 Integral membrane sensor signal transduction his... 259 2e-67 UniRef50_A8S8Z5 Putative uncharacterized protein n=1 Tax=Faecali... 259 2e-67 UniRef50_B8I948 Histidine kinase n=1 Tax=Clostridium cellulolyti... 259 2e-67 UniRef50_B8I426 Putative sensor with HAMP domain n=2 Tax=Clostri... 259 3e-67 UniRef50_C6LII7 Putative HAMP domain protein n=1 Tax=Bryantella ... 258 3e-67 UniRef50_C6CVX1 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2... 258 3e-67 UniRef50_B8I4I2 Putative sensor with HAMP domain n=2 Tax=Clostri... 258 3e-67 UniRef50_C0C2A0 Putative uncharacterized protein n=1 Tax=Clostri... 258 3e-67 UniRef50_C4G4K8 Putative uncharacterized protein n=1 Tax=Abiotro... 258 3e-67 UniRef50_C0D790 Putative uncharacterized protein n=1 Tax=Clostri... 258 3e-67 UniRef50_A4IP92 Two-component sensor histidine kinase n=5 Tax=Ge... 258 4e-67 UniRef50_UPI0001B9ECA5 integral membrane sensor signal transduct... 258 4e-67 UniRef50_C5EPK6 Predicted protein n=1 Tax=Clostridiales bacteriu... 258 6e-67 UniRef50_C6LGW6 Putative HAMP domain protein n=1 Tax=Bryantella ... 257 7e-67 UniRef50_Q1JFY4 Two-component sensor kinase yesM n=47 Tax=Strept... 257 7e-67 UniRef50_B8I0Y1 Putative sensor with HAMP domain n=1 Tax=Clostri... 257 8e-67 UniRef50_C6CXK8 Signal transduction histidine kinase, LytS n=1 T... 257 8e-67 UniRef50_C0W657 Two-component sensor histidine kinase n=1 Tax=Ac... 257 9e-67 UniRef50_A4XMI4 Signal transduction histidine kinase, LytS n=1 T... 257 1e-66 UniRef50_A4XMI9 Integral membrane sensor signal transduction his... 257 1e-66 UniRef50_C6LJK1 Two-component sensor kinase YesM n=1 Tax=Bryante... 256 1e-66 UniRef50_Q5WIY4 Two-component sensor histidine kinase n=1 Tax=Ba... 256 1e-66 UniRef50_C4FYZ1 Putative uncharacterized protein n=1 Tax=Abiotro... 256 1e-66 UniRef50_UPI0001789511 integral membrane sensor signal transduct... 256 1e-66 UniRef50_C4FY32 Putative uncharacterized protein n=1 Tax=Catonel... 256 1e-66 UniRef50_UPI0001C36197 putative sensor with HAMP domain n=1 Tax=... 256 2e-66 UniRef50_C6CWR8 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2... 256 2e-66 UniRef50_C5EHK2 Putative uncharacterized protein n=2 Tax=Clostri... 256 2e-66 UniRef50_B0K3C6 Histidine kinase n=4 Tax=Thermoanaerobacter RepI... 256 2e-66 UniRef50_B8FWU3 Putative sensor with HAMP domain n=2 Tax=Desulfi... 256 2e-66 UniRef50_UPI0001C36BEE signal transduction histidine kinase, Lyt... 255 3e-66 UniRef50_D1PPK9 Putative two-component sensor histidine kinase n... 255 3e-66 UniRef50_Q5WBZ1 Two-component sensor histidine kinase n=1 Tax=Ba... 255 3e-66 UniRef50_B7GJK8 Signal transduction histidine kinase n=1 Tax=Ano... 255 3e-66 UniRef50_B0K233 Integral membrane sensor signal transduction his... 255 3e-66 UniRef50_A8RPD3 Putative uncharacterized protein n=1 Tax=Clostri... 255 3e-66 UniRef50_UPI0001C351A4 integral membrane sensor signal transduct... 255 3e-66 UniRef50_C0D8C9 Putative uncharacterized protein n=1 Tax=Clostri... 255 4e-66 UniRef50_C6D660 Histidine kinase n=2 Tax=Bacteria RepID=C6D660_P... 255 4e-66 UniRef50_D2LUI0 Histidine kinase n=1 Tax=Bacillus cellulosilytic... 255 4e-66 UniRef50_C5EQ48 Signal transduction histidine kinase n=2 Tax=Clo... 255 4e-66 UniRef50_UPI0001C351CC multi-sensor signal transduction histidin... 255 4e-66 UniRef50_C7IFK1 Putative sensor with HAMP domain n=1 Tax=Clostri... 255 5e-66 Sequences not found previously or not previously below threshold: >UniRef50_P0AA94 Inner membrane protein ypdA n=114 Tax=Bacteria RepID=YPDA_ECO57 Length = 565 Score = 652 bits (1683), Expect = 0.0, Method: Composition-based stats. Identities = 565/565 (100%), Positives = 565/565 (100%) Query: 1 MHEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFST 60 MHEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFST Sbjct: 1 MHEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFST 60 Query: 61 WSGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSIL 120 WSGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSIL Sbjct: 61 WSGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSIL 120 Query: 121 AGCISGWINLKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILG 180 AGCISGWINLKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILG Sbjct: 121 AGCISGWINLKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILG 180 Query: 181 SVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIH 240 SVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIH Sbjct: 181 SVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIH 240 Query: 241 ADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSM 300 ADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSM Sbjct: 241 ADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSM 300 Query: 301 LVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAE 360 LVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAE Sbjct: 301 LVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAE 360 Query: 361 LRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKEL 420 LRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKEL Sbjct: 361 LRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKEL 420 Query: 421 YQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTI 480 YQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTI Sbjct: 421 YQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTI 480 Query: 481 SVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRRL 540 SVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRRL Sbjct: 481 SVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRRL 540 Query: 541 EPGTEIAFYIPNQRTPVASQATLLL 565 EPGTEIAFYIPNQRTPVASQATLLL Sbjct: 541 EPGTEIAFYIPNQRTPVASQATLLL 565 >UniRef50_Q39S58 Histidine kinase internal region n=4 Tax=Bacteria RepID=Q39S58_GEOMG Length = 576 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 205/576 (35%), Positives = 314/576 (54%), Gaps = 18/576 (3%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 + ++L+ + +R L I ++R + + L A S E L ++ +F + T+ G Sbjct: 1 MLHLLVNLLERLGLFAIAFILVMRFAIVKRFLIGKA-SRYEKLTLSVLFGFIGIAGTYMG 59 Query: 64 VPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGC 123 VP++ ++ N R++ V GGIL GP VG G+IAG HR+LID+GG TA C + +I G Sbjct: 60 VPIQNAIANSRVVGVALGGILGGPLVGFGAGLIAGGHRFLIDVGGFTATACGVATIAEGV 119 Query: 124 ISGWINLKIPKAQ-RWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMI-LGS 181 G I ++ + Q V + G+ ETL M++++V A + +VS IG PMI + S Sbjct: 120 AGGLIYHRLKRGQFDPAVAFITGVAVETLQMVILLVMAKPFTAAVSLVSVIGFPMILVNS 179 Query: 182 VCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDDIH 240 + + V LV SV EKE AA QA+ AL+IA +TLP R + S IIR+ Sbjct: 180 IGLALFVELVSSVFREKERFAAVQAQTALNIALRTLPFLRGGLTEGSAAATARIIREMTD 239 Query: 241 ADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRT----PE 296 DAVAIT+ +LA+ G E +++ G ++ +TR A+ G+I + Sbjct: 240 LDAVAITDEAAILAHTGAEEDHHRPGLPLLTASTRSALASGEITTPLTRDDIGCTHEGCR 299 Query: 297 IHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMA 356 + S +++PL ++ G LK+Y IT E+A GL+ + S QLE+S E R++ Sbjct: 300 LGSAIIVPLKKRERTVGALKLYRLKEGGITPLDMELANGLAHLFSNQLEISELEAQRKLV 359 Query: 357 NKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDI 416 +AE+RALQ++INPHFLFN +N I S R +P+TA L+ L+ + R NI D + + Sbjct: 360 REAEIRALQAQINPHFLFNTINTIISYTRTSPETASDLLVKLADFFRRNINPGGDS-VPL 418 Query: 417 KKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGK 475 EL + YIAIE+ARF D+L V++D+DEE + C +P+L +QPLVENA+ HGI P + Sbjct: 419 ATELEHCRAYIAIEKARFEDRLRVVFDVDEEALGCKLPTLTLQPLVENALKHGILPREEG 478 Query: 476 GVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEM-----PGNKIGLLNVHHRVKLL 530 G + + G VRI V D G G+ P+ + R+ + E G I L NV+ R+ L Sbjct: 479 GEIRVGAHREGGVVRIVVGDNGVGMPPEQVARLFSGESSQLPTEGAGIALNNVNARLSAL 538 Query: 531 YGEGLHI---RRLEPGTEIAFYIPNQRTPVASQATL 563 YG + GT ++F +P + +L Sbjct: 539 YGPEHALRVESTPGAGTTVSFTVPQGGRGEYAHESL 574 >UniRef50_Q2RH26 Histidine kinase internal region n=3 Tax=Bacteria RepID=Q2RH26_MOOTA Length = 576 Score = 595 bits (1535), Expect = e-168, Method: Composition-based stats. Identities = 187/570 (32%), Positives = 318/570 (55%), Gaps = 16/570 (2%) Query: 5 FNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGV 64 ++M L + +R +++ F L R +L + + ++ L + + + T++G+ Sbjct: 3 WSMGLHLAERLSMVATAAFILSRTPALGRILSRQ-LTNRDRLLLVLVLGGMGIVGTYAGI 61 Query: 65 PVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCI 124 P+ +L N R++ VM G+L GP+VG G+IAGIHRYL+ GG TA C + ++ G + Sbjct: 62 PIHDALANSRVVGVMVAGLLGGPFVGAGAGLIAGIHRYLM--GGFTAFACGLAAVAEGTL 119 Query: 125 SGWINLKIPKAQ-RWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMI-LGSV 182 G + ++ W + G++ ET+ M+++++ A +V IG PMI + S+ Sbjct: 120 GGLVQQCYRRSPVPWPMAFAAGLVGETMQMVIILLTARPFTEAWALVQIIGPPMIIVNSI 179 Query: 183 CIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDDIHA 241 + + +V++ +++ AA QA+ ALDIAN+TLP R +N ES + II + I Sbjct: 180 GVAIFMFIVKTAAEQQDHIAACQAQRALDIANQTLPFLRHGLNRESAEEAARIIFNSIKV 239 Query: 242 DAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRT----PEI 297 AVAIT+ +LA+VG+G ++ G ++ T QA+ G++ + + + Sbjct: 240 AAVAITDRQEILAHVGMGSDHHHPGMPIMTSATLQAIATGELQLARSRGEIGCREKDCRL 299 Query: 298 HSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMAN 357 S +V+PL + GTLK+Y+ + IT+ E+A GL+ + STQLE++ + ++ + Sbjct: 300 ASAVVVPLKRREATIGTLKLYHERENSITTVDLELARGLAHLFSTQLELAEVKYQAQLRS 359 Query: 358 KAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIK 417 +AEL+ LQ++I+PHFLFNALN ISS IR P+ AR+L+ L+ + RY++ +DD I + Sbjct: 360 QAELKVLQAQIHPHFLFNALNTISSLIRTRPEKARELLAKLASFFRYSLR-RDDNPIPLA 418 Query: 418 KELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKG 476 +EL + Y+AIE+ARFG+KL VI +D + +P+ +QP+VENAI HG+QP G Sbjct: 419 EELAHVDSYLAIEEARFGNKLEVIRQVDPATLAFPVPAFTLQPVVENAIKHGLQPRTQGG 478 Query: 477 VVTISVAECGNRVRIAVRDTGHGIDPKVIERV-EANEMPGNKIGLLNVHHRVKLLYGEGL 535 V ++ ++ G V + V D G GI P+ + ++ G+ +GL V+ R+K LYG Sbjct: 479 RVILNASDRGADVEVRVTDDGVGIAPEEMNKIFLPGYGRGHGLGLSIVNERLKALYGPEY 538 Query: 536 HI---RRLEPGTEIAFYIPNQRTPVASQAT 562 + GTE+ P + + Sbjct: 539 AVRVKSVPGQGTEVVLRFPKKVEHREVKEE 568 >UniRef50_C9RCQ9 Signal transduction histidine kinase, LytS n=4 Tax=Thermoanaerobacterales RepID=C9RCQ9_AMMDK Length = 572 Score = 589 bits (1520), Expect = e-167, Method: Composition-based stats. Identities = 189/563 (33%), Positives = 312/563 (55%), Gaps = 16/563 (2%) Query: 7 MLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPV 66 + L + +R +L+ F L R+ +L + SP++ L +T + + T++ VP+ Sbjct: 6 LALILAERLSLIATAAFLLSRMPALGRILSRQP-SPRDKLLLTLVMGGLGILGTYAAVPI 64 Query: 67 EGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISG 126 G+L N R++ VM G+L GP VG G+IAG+HRY +GG TA C + +++ G + G Sbjct: 65 HGALANSRVVGVMVAGLLGGPLVGAGAGLIAGVHRYF--LGGFTAFACGLAAVVEGTLGG 122 Query: 127 WINLKIPKAQ-RWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMI-LGSVCI 184 + + W + L G+ E L M ++++ A + +V IG+PMI + S+ + Sbjct: 123 LVRHYYRRNLVPWHIAWLAGLTGEMLQMGIILLTARPFPEALALVKIIGLPMITVNSIGV 182 Query: 185 GFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDDIHADA 243 +L+V+S ++E AA QA+ AL IAN+TLP R ++ S ++V II + A Sbjct: 183 AIFMLIVKSAVEQEERVAALQAQQALKIANQTLPYLRQGLSEHSAQQVASIIYHSLKVAA 242 Query: 244 VAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPE----IHS 299 VAIT+ + +LA+VG G ++ G ++ T +A+ G+I + + + S Sbjct: 243 VAITDREKILAHVGTGSDHHHPGHPILTSATLKALATGEIQVAQTRKEIGCCHPNCRLGS 302 Query: 300 MLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKA 359 +V+PL + GTLK+Y+ + IT E+A GL+++ STQLE++ E + +A Sbjct: 303 AVVVPLKLRENTIGTLKLYHTQENSITPVNLELARGLARLFSTQLEIAELEYQARLKTQA 362 Query: 360 ELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKE 419 EL+ALQ++++PHFLFNALN I+S IR P AR+L+ L+++LR+++ ++ I + +E Sbjct: 363 ELKALQAQVHPHFLFNALNTITSLIRTRPGEARELLVKLAKFLRHSLR-DENTVIPLAEE 421 Query: 420 LYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVV 478 L ++ Y+AIE+AR GDKL V Y +D + + L++QPLVENA+ HG+ P G V Sbjct: 422 LSCVEAYLAIEKARQGDKLQVFYRVDPSALGYPVLPLILQPLVENAVKHGLYPKAEGGKV 481 Query: 479 TISVAECGNRVRIAVRDTGHGIDPKVIERV-EANEMPGNKIGLLNVHHRVKLLYGEGLHI 537 I V + V I V+D G GI P + ++ A G +GL V+ R+K YG + Sbjct: 482 EIIVEDLPEEVMIMVKDDGIGIAPAELAKIPLAGYGRGRGLGLFLVNERLKKFYGPEYGL 541 Query: 538 ---RRLEPGTEIAFYIPNQRTPV 557 GTE++ P + Sbjct: 542 KIKSAPGQGTEVSLSFPKREVEE 564 >UniRef50_A1HTW6 Signal transduction histidine kinase, LytS n=2 Tax=Bacteria RepID=A1HTW6_9FIRM Length = 564 Score = 582 bits (1502), Expect = e-165, Method: Composition-based stats. Identities = 190/562 (33%), Positives = 313/562 (55%), Gaps = 16/562 (2%) Query: 6 NMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVP 65 ++ + + R A++ + + + FR L+ +P+E + FS ++ T+ G+P Sbjct: 4 SLSMVLSQRIAIIAVVAYIFSQTNAFR-LMFTENTTPREKCILILFFSTVSIAGTYFGIP 62 Query: 66 VEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCIS 125 +EG++ NVR + G+L GP VG TG+I+G+HR I +GG TA+PC + +I+ G + Sbjct: 63 IEGAIANVRDTGSIVAGLLGGPLVGTATGLISGLHR--ISLGGFTAVPCGLATIIGGIFA 120 Query: 126 GWINLKIP-KAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL-GSVC 183 G+++ K K W G+L G+ +M L+++++ A +V ++ +PM L ++ Sbjct: 121 GYVHSKTRPKTTEWITGVLIGVAVILFSMALILLFSKPAAAARSLVMQVTVPMCLANALG 180 Query: 184 IGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDDIHAD 242 I ++++ + + A Q AL IAN LP FR ++ S KV I + A Sbjct: 181 IAVFMIIIHNAREHQTKIGALQTNKALRIANAALPYFRQGLSDLSAEKVAATILNMTSAA 240 Query: 243 AVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRT----PEIH 298 AVAITN + VLA+VG+G ++ NG ++ T+ + G++ + + Sbjct: 241 AVAITNREKVLAHVGLGSDHHTNGRPLLTAATKSCLESGQVTVAQRSSEIGCIHPNCPLK 300 Query: 299 SMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANK 358 S +V+PL+ + + GTLK+YY +T+ E A GL QI+STQLE++ +Q E+A K Sbjct: 301 SAVVVPLYCRDEIVGTLKMYYALEEAMTALDLEFAQGLGQILSTQLELANLQQKAELAAK 360 Query: 359 AELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKK 418 AEL+AL+++INPHFLFNALN I S R NP+ AR L+ LS + R +++ + + +++ Sbjct: 361 AELKALRAQINPHFLFNALNTIVSLCRTNPEQARNLLIELSDFFRRSLK-SARDFVTLRE 419 Query: 419 ELYQIKDYIAIEQARFGDKLTVIYDID-EEVNCCIPSLLIQPLVENAIVHGIQPCKGKGV 477 EL + Y+A+E+ARFG +LTV+ DID +N +P+ +QPLVEN + HG+ + G Sbjct: 420 ELEHVDSYLALEKARFGRRLTVVKDIDAAALNILLPAFTLQPLVENGVKHGLLAKEEGGT 479 Query: 478 VTISVAECGNRVRIAVRDTGHGIDPKVIERVEA-NEMPGNKIGLLNVHHRVKLLYGEGLH 536 + IS G+ V I + D G GI + E + GN IGL NV+ R+K +YG Sbjct: 480 IRISAHCQGSDVHITISDDGQGIPSSIQEHILVCGFGKGNGIGLSNVNERLKTIYGPQYA 539 Query: 537 I---RRLEPGTEIAFYIPNQRT 555 + R GT + ++P R Sbjct: 540 LKINSREGKGTTVKLHVPISRG 561 >UniRef50_A1VG05 Signal transduction histidine kinase, LytS n=4 Tax=Desulfovibrio RepID=A1VG05_DESVV Length = 580 Score = 578 bits (1491), Expect = e-163, Method: Composition-based stats. Identities = 181/571 (31%), Positives = 295/571 (51%), Gaps = 15/571 (2%) Query: 1 MHEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFST 60 + I M + + +R L+L F ++ + +L S + + +FSLF + T Sbjct: 4 VPYIPPMFITLSERFGLLLAGGFAIMTLAPLDKLGPGRTRSWRATALLVVLFSLFTILGT 63 Query: 61 WSGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSIL 120 ++G V S N+R + ++ G+ GP VG +TG+IAG HRY ID+GG +A+PC + + L Sbjct: 64 YNGNIVFQSFANLRAMGAVTAGLFGGPVVGALTGLIAGGHRYFIDVGGFSAVPCGLATFL 123 Query: 121 AGCISGWINLKIP-KAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMI- 178 G +G + P ++ W + + E + M LV+ A A +D+V IG+PMI Sbjct: 124 EGLAAGLFAWRFPSRSLDWGTAMTFAAVGEAVHMCLVLGLARPYAQAVDLVEVIGLPMIL 183 Query: 179 LGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRD 237 L V V ++ ++ + QA+ L IAN+TLP R +++ S R EII D Sbjct: 184 LNGVGAAIFVQALRMQMHFRDLRDSSQARQILSIANRTLPHLRAGLSAASARATAEIILD 243 Query: 238 DIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRT--- 294 + AVA+T+ D V+A+VG +++ G + TR+ G + + Sbjct: 244 ETRVAAVALTSNDMVMAHVGAASDHHRAGHSVCTQATRRVATDGIPLFVTGHDEIGCQLE 303 Query: 295 -PEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLR 353 + S +++PL + + G LK+Y + +L E+A GL+ + +TQ+E+ Sbjct: 304 ACPLCSAIIVPLRKGDTILGCLKLYGTKDRPLDQTLFELAKGLADLFATQIELEDIGIKN 363 Query: 354 EMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQ 413 ++ +AE+R LQ++INPHFLFN+LN ++S R P AR+LI +L+RY+R N++ E Sbjct: 364 QLLARAEIRRLQAQINPHFLFNSLNTVASFCRTAPGQARELILDLARYMRRNLDTS-REA 422 Query: 414 IDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPC 472 I + +E QI+ Y+ IE+ARFG+++ + DID E C +P LLIQPLVEN++ HGI Sbjct: 423 IHLAEEAEQIRAYLVIEKARFGERIRAVIDIDPETEHCLVPPLLIQPLVENSVRHGILGN 482 Query: 473 KGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN---EMPGNKIGLLNVHHRVKL 529 + GVV ++ + V + V D G G+ + + G IG N + R+ Sbjct: 483 EEGGVVRLATSMEDGHVVVVVEDDGAGMPESTRQGILNGTPVTAHGEGIGASNCNQRLVQ 542 Query: 530 LYGEGLHIRR---LEPGTEIAFYIPNQRTPV 557 LYG + GT I F +P Sbjct: 543 LYGPAYALSIDSAPGMGTRITFRVPASTDAE 573 >UniRef50_C0ZI45 Two-component sensor histidine kinase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZI45_BREBN Length = 575 Score = 576 bits (1486), Expect = e-163, Method: Composition-based stats. Identities = 188/565 (33%), Positives = 311/565 (55%), Gaps = 21/565 (3%) Query: 5 FNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGV 64 +++ + +R A++++ R+R FR +L++ A + +E + IFS ++ T++G+ Sbjct: 3 LALMVPLTERTAVLIVMALLFTRVRAFRSILNQQA-TWREKALMVVIFSAISILGTYNGI 61 Query: 65 PVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCI 124 + ++ N R+I + G+L GPWVG++TG+IAGIHRY +GG T + C I++I G Sbjct: 62 WYQDAIANSRVIGTVVAGLLAGPWVGLMTGLIAGIHRY--SLGGFTDLACAISTISEGLF 119 Query: 125 SGWINLKIPKAQR---WRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPM-ILG 180 +G I + + W + G L E L M +V++ A A + +V I +PM ++ Sbjct: 120 AGLIYQFLRNRSKKIGWTTALFVGFLAEWLQMGIVLLIARPYADALALVQAISVPMSVVN 179 Query: 181 SVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDDI 239 SV I +++++ + E++ A QA+ L +A+KTL R + +S +KV E I Sbjct: 180 SVGIAILIIIIDLAKKEEDRIGALQAQRTLQVADKTLSYLRQGLTYDSAQKVAEEILRTT 239 Query: 240 HADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRT----P 295 AVAIT+T VLA+VG G ++ G+ + TR+ ++ ++ I E Sbjct: 240 RVAAVAITDTRSVLAHVGAGSSHHVVGEGITTKATREVLSTKEVKIAQTKEEIGCRETNC 299 Query: 296 EIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREM 355 + +++PL + V G LK+Y + ++++ E+ GL +IS+QLE++ E+ + Sbjct: 300 PLRYAILVPLMRRREVAGVLKLYQDRSRKLSAVDLELVRGLGNLISSQLELAELEKQSRL 359 Query: 356 ANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQID 415 AE+RAL ++INPHFLFNALN I S IR P+ AR+L+ +L Y R N+ + Sbjct: 360 LADAEIRALHAQINPHFLFNALNTIVSFIRFRPEQARELLIHLGEYFRRNLHDSGG-YVS 418 Query: 416 IKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKG 474 + +EL I+ Y+AIE+ARFGDKL V YDI++ V +P L++QPLVENA+ HG+ P + Sbjct: 419 LARELEHIEAYLAIERARFGDKLHVEYDIEDGVERFTVPGLILQPLVENAVKHGLLPKRE 478 Query: 475 KGVVTISVAECGNRVR-IAVRDTGHGIDPKVIERVEANEMPG---NKIGLLNVHHRVKLL 530 G V I ++ + V D G G++ ER + G + IGL NV R++ + Sbjct: 479 GGTVVIRACRKEKQIVELTVADNGVGMEVDPSERAPDEKRAGRQLSGIGLANVKSRLQSI 538 Query: 531 YGEGLHI---RRLEPGTEIAFYIPN 552 YGE I + GT +P Sbjct: 539 YGEPYGIVIESKSGSGTTCTIQLPI 563 >UniRef50_C5VR12 Sensor protein LytS n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VR12_CLOBO Length = 557 Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats. Identities = 237/558 (42%), Positives = 381/558 (68%), Gaps = 7/558 (1%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 + +++ + + ++ F L + ++++ K + K+L+ ++ +F F + T+ G Sbjct: 1 MVDLIKNLINNMGYFILIAFVLSQCESLKKIIVKDEFNKKDLVILSIVFGGFGILGTYIG 60 Query: 64 VPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGC 123 + G++ N RI+ VM+GGIL GP++GI++ +I+GIHR LI+ GG+TAIPC +T++ G Sbjct: 61 TEIHGAIANTRIVGVMAGGILCGPFIGILSAIISGIHRVLIESGGLTAIPCAVTTVACGF 120 Query: 124 ISGWINLKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPM-ILGSV 182 I G+++ ++ RW G+LGG+ ETL MIL+++++ + + IV I IPM + +V Sbjct: 121 IGGFLHKYTNQSNRWLYGLLGGLGVETLEMILILIFSKPFYVALSIVKNIYIPMGLANAV 180 Query: 183 CIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIHAD 242 I ++LL++++ EKE AA+QAK++LDIANKTLP FR +N+ES K+C+II++ I +D Sbjct: 181 GISLLILLIENIFEEKEEIAAKQAKISLDIANKTLPYFREINAESFEKICKIIKEYIKSD 240 Query: 243 AVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAH----RTPEIH 298 AVAIT+ HVLA+VG+G ++ G + ++ T + + GKI+ N E + + Sbjct: 241 AVAITDKKHVLAHVGLGADHHIKGAEILTHATEKVIKQGKILTLTNAEEINCSCHSCPLK 300 Query: 299 SMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANK 358 S +++PL E+ + GTLKIYY I+ + +A+GLSQIISTQLE+S+ +L+EMA K Sbjct: 301 SGIIVPLKERKNIIGTLKIYYGKNDAISFKNKNLAIGLSQIISTQLEISKIGKLKEMATK 360 Query: 359 AELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKK 418 AE++ALQ++INPHFLFN+LN I+S +R+NP+ AR LI NLS +LRYN+E+ D+ +D+ K Sbjct: 361 AEIKALQTQINPHFLFNSLNTIASFVRINPNKARDLIINLSTFLRYNLEM-GDDLVDVYK 419 Query: 419 ELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVV 478 EL Q+K Y+++E+ARFG+K++V Y+I ++ +PSL+IQP+VENAI HGI KG V Sbjct: 420 ELEQVKAYVSVEKARFGEKISVAYNIQNNIDIKMPSLIIQPIVENAIKHGILNSGRKGKV 479 Query: 479 TISVA-ECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI 537 IS+ + N + V D G GI+ ++I++V + M NKIG+ NV++R+KL YG+GL+I Sbjct: 480 KISIELKSNNAFEVIVEDNGVGIEEEIIKKVYSGTMKENKIGISNVNNRLKLFYGQGLNI 539 Query: 538 RRLEPGTEIAFYIPNQRT 555 RLE GT+++F + + Sbjct: 540 ERLEEGTKVSFIVKRIKE 557 >UniRef50_A8MGZ4 Signal transduction histidine kinase, LytS n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MGZ4_ALKOO Length = 556 Score = 567 bits (1463), Expect = e-160, Method: Composition-based stats. Identities = 201/560 (35%), Positives = 331/560 (59%), Gaps = 18/560 (3%) Query: 3 EIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWS 62 EIF + + + + +LM + F L + F+ L+ +S K + + IFS F + T+ Sbjct: 2 EIFKIPITLLNSISLMFLITFLLSKTNSFKNLILNKKNSFKNKIFLAIIFSTFGILGTYY 61 Query: 63 GVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAG 122 G P+EG++ N R+I V+ GG+L GP+VGI GV+AG+HR++IDIGG T++ C I++++ G Sbjct: 62 GFPIEGAIANSRVIGVVVGGLLAGPFVGISAGVVAGVHRWVIDIGGFTSVACMISTVVGG 121 Query: 123 CISGWINLKIPKAQ-RWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPM-ILG 180 + K W +G M+ E L M++VI+ A + +++V KI +PM ++ Sbjct: 122 ILGSIAYRYKDKVNKNWILGFSVTMVAEILQMLIVIIVAKPYPVAVNVVKKIIMPMTLMN 181 Query: 181 SVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDDI 239 S+ + +LL++S+ E+E AA Q++LAL IA+KTLP+ R N E+ C+II Sbjct: 182 SIGVALFILLLESIFKEQEREAAIQSELALKIADKTLPILRNGFNQETASATCDIIYSIA 241 Query: 240 HADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRT----P 295 DAVAITN ++A+VGVG ++ G+ + T+ A+ + +I N E Sbjct: 242 KVDAVAITNKSEIIAHVGVGSDHHLPGETIKTVATKTALKLKRSVIVENKEEIGCQNKNC 301 Query: 296 EIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREM 355 ++ S +V+PL++K V G LKIY + I+S ++A L+++ STQ+E++ + ++ Sbjct: 302 KLKSTIVVPLFKKDQVIGVLKIYKATKNGISSVDVQLAEDLAKLFSTQIELAEIDYNAKL 361 Query: 356 ANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQID 415 + AEL+ALQ++INPHFLFN++N I S R++P+ AR+L+ NL +LR + + + +D Sbjct: 362 LSIAELKALQAQINPHFLFNSINTIVSLCRIDPELARKLLINLGNFLRESFKEN-EYIVD 420 Query: 416 IKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGK 475 I E+ ++ Y+ IE+ARFG KL V+YDI+ + N IP L++QPLVENA+ HGI P K Sbjct: 421 ISNEIKHVEAYLEIEKARFGKKLNVVYDINCD-NFKIPHLVLQPLVENAVKHGIYPKKDG 479 Query: 476 GVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGL 535 G + + + E I + D G G D A++ + IG+ NV R++ +YG+ Sbjct: 480 GTIYVMIHEDLEHYIIHIEDNGIGFDSG------AHKPTHHGIGIKNVDKRLQSIYGKDY 533 Query: 536 HI---RRLEPGTEIAFYIPN 552 + ++ GT+I IP Sbjct: 534 GLKIQSTIDIGTKILINIPK 553 >UniRef50_B8CWX8 Signal transduction histidine kinase, LytS n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWX8_HALOH Length = 578 Score = 565 bits (1458), Expect = e-159, Method: Composition-based stats. Identities = 175/568 (30%), Positives = 311/568 (54%), Gaps = 18/568 (3%) Query: 6 NMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVP 65 +L + +++ + L RLF+ + S KE + + F L + T+ + Sbjct: 9 GLLFILVRNMGVVVTFAYILSMTRLFKRFFYA-PLSRKEKIFLVIFFGLLSASGTYLSIY 67 Query: 66 VEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCIS 125 + + N+R I + G L GP +G++ G + GIHR+ +GG TA+ C I ++ +G I Sbjct: 68 IMDAYANIRAIGAVVAGFLGGPLIGVLVGTVGGIHRF--TLGGFTALACAIGTMTSGLIG 125 Query: 126 GWINLKIPKAQ-RWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL-GSVC 183 G + Q + G + + M++VI+++ L + +VS I +PMI+ + Sbjct: 126 GLFHKSFKNQQINSKNSFYIGAVALIIEMVIVIIFSRPIELALQLVSVISLPMIIANAAG 185 Query: 184 IGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHV--NSESLRKVCEIIRDDIHA 241 I V ++ +VE E E A+QA+L LDIAN+T+ FR + +++K EII A Sbjct: 186 ISLFVSILNNVEKENENIKAKQARLTLDIANQTINYFREGLAHGRAVKKASEIILQKTGA 245 Query: 242 DAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRT----PEI 297 AVAIT+ + ++A+ G G ++ G+ F++ TRQ +N GK+ + + + Sbjct: 246 SAVAITDREKIIAFAGKGSDHHFPGEPFLTSVTRQTINEGKVSVAKTKKEVGCPVENCPL 305 Query: 298 HSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMAN 357 S++V PL G V G+LK+Y+ +++ +A G+S ++STQ+++SR + ++ Sbjct: 306 ESVVVAPLKWDGRVMGSLKLYHTE-RKLSKVDISLAEGISTLLSTQIQLSRLSEQAKLKT 364 Query: 358 KAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIK 417 +AEL+ALQ+++NPHFLFN+LN I+S R +P+ AR+L+ LS + R + K + + ++ Sbjct: 365 EAELKALQAQVNPHFLFNSLNTIASFTRTDPEKARELLLRLSDFFRTTLS-KGHDLVSLE 423 Query: 418 KELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKG 476 E+ +++Y +E+ARFG++L ++ +I +E ++ IPS +QPL+ENA+ HGI P KG Sbjct: 424 TEIKSVRNYFFLEKARFGERLELVINIPDEYMSVMIPSFTLQPLIENAVKHGIFPKNRKG 483 Query: 477 VVTISVAECGNRVRIAVRDTGHGIDPKVIER-VEANEMPGNKIGLLNVHHRVKLLYGEGL 535 + +SV + + + VRD G GI + ++ ++ G+ IGL NV R+K ++G Sbjct: 484 KIDLSVRSNEDIIELIVRDNGVGIPEEELKMVLKEGYGKGSGIGLSNVMARIKNIFGPEY 543 Query: 536 HI---RRLEPGTEIAFYIPNQRTPVASQ 560 + GTE+ +P Q Sbjct: 544 GLTMESEENTGTEVVIKVPLQTIKREEN 571 >UniRef50_UPI0001C42EFA two-component sensor histidine kinase n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42EFA Length = 582 Score = 562 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 182/583 (31%), Positives = 317/583 (54%), Gaps = 34/583 (5%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 ++ +LL + +R +++ F + R R R ++ + S + L +F LF + T++G Sbjct: 1 MWELLLVMLERLGIIVTVAFLVTRFRFVRNIIEEKNVSSIQRLHFILMFGLFGIIGTYTG 60 Query: 64 VPVEG----------------SLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIG 107 + + ++ N R+I ++ G+L G VGI G+IAGIHRY +G Sbjct: 61 LTINAEEGVYTRWTLSLTDDEAIANARVIGIVVAGLLGGWKVGIGAGLIAGIHRY--TLG 118 Query: 108 GVTAIPCFITSILAGCISGWINLKIPKAQ--RWRVGILGGMLCETLTMILVIVWAPTTAL 165 G +A+ C I+++LAG I+G+ K + W+ +L GML E + M+++++ A + Sbjct: 119 GFSALACAISTVLAGLIAGYFYKKYRNHRMVSWKNALLIGMLAEAVQMLIILLIAKPFSA 178 Query: 166 GIDIVSKIGIPMIL-GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HV 223 +VS IG+PMI+ + +L++++V E+E QA+ + +AN+TL R + Sbjct: 179 AWALVSSIGVPMIIANGIGTAIFILIIRNVINEEERMGKLQAERSFKLANQTLKYMRKGL 238 Query: 224 NSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKI 283 N S + C I+ +I+ AV+ITN VLAYVG E N + + T++ + G+ Sbjct: 239 NESSAKAACHILFKEINVAAVSITNHQTVLAYVG--EENGNEKQEIKTKATKEVLKTGEW 296 Query: 284 IIKNNDEAHRT---PEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQII 340 + + + HS ++ PL + GTLK+Y+ + T + E+A GL++++ Sbjct: 297 KLADARDMEGLNVREPHHSAIIAPLIQNEKPVGTLKLYFKSEKERTPTTIELAKGLAELL 356 Query: 341 STQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSR 400 S QL+++ A+ ++A +AE+ AL++++NPHFLFNALN I S IR +P+ AR+L+ +LS+ Sbjct: 357 SQQLQLAYADDQLKLAKQAEINALEAQVNPHFLFNALNTIVSLIRTDPNKARKLLISLSK 416 Query: 401 YLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNC-CIPSLLIQP 459 + R N+ ++ IK+EL +K Y+ IEQARF D+L V Y++ + + +P + +QP Sbjct: 417 FFRQNLTGIHAKEATIKEELNHVKAYLQIEQARFSDRLEVYYEVSDSLMYVTVPPMTLQP 476 Query: 460 LVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEA---NEMPGN 516 LVENA+ HG++ G + I V + + V I V D+G GI + + + G Sbjct: 477 LVENAMKHGLKDKVGHCTLVIRVYQHEHFVCIDVEDSGVGISEQRQKELFTQPVQSEVGT 536 Query: 517 KIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRTP 556 IGL N+ R++++YG I +E G I +R Sbjct: 537 GIGLYNMKRRLEMMYGSHFEIKVKSEVEQGATFTLCINQERDE 579 >UniRef50_A1HSX0 Signal transduction histidine kinase, LytS n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSX0_9FIRM Length = 636 Score = 558 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 191/565 (33%), Positives = 312/565 (55%), Gaps = 17/565 (3%) Query: 5 FNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGV 64 F ++L + AL+ + F+ R R + +P+ L +T IFS+ ++ T++GV Sbjct: 75 FELVLELMGDMALLAMAANFIGRNRYIASC-AERPTTPRSWLTLTVIFSVLSILGTYTGV 133 Query: 65 PVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCI 124 PVEG+L N R++ + GGI+ GPWVG+ G I+G+HRYLI GG TA C ++L G + Sbjct: 134 PVEGALANTRLVGTLMGGIMGGPWVGLGIGFISGLHRYLI--GGFTAEICGAATLLGGLM 191 Query: 125 SGWINLKIP-KAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPM-ILGSV 182 +G K W+ L + E L +V++ A + I +P ++ + Sbjct: 192 AGMARQKYGLHGINWKKAALLALAAEGLQKGMVLLLAKPFEAAWALEKAIAVPTTVVTML 251 Query: 183 CIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDDIHA 241 +L+++ ++ E+E A+ A+L+L+IA++TLP R + ES +K EII Sbjct: 252 GTVVFMLILKDIKTEQELHGAKAAQLSLEIASRTLPFLRHGLTMESAQKTAEIIFAFTGM 311 Query: 242 DAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRT----PEI 297 DAV+I+N + VLA+VG G +++ G+ ++ +T+Q + G + I + + + Sbjct: 312 DAVSISNREQVLAFVGKGADHHKPGEPIMTQSTKQTLISGMLHIVHTAQEQGCPVAGCPL 371 Query: 298 HSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMAN 357 S +V PL G V GT+K+ + IT MA G++ ++S Q+E++ + R+M Sbjct: 372 QSSVVAPLVVNGAVIGTVKLNRTVPNGITEVDIRMAEGIAHLLSVQIELAEIDCQRKMRE 431 Query: 358 KAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIK 417 KAEL+ALQ++INPHFLFN +N I S R NPDTAR L+ +L+ LR++ + + + +K Sbjct: 432 KAELKALQAQINPHFLFNTINIIMSFCRTNPDTARSLLGHLATMLRHSFADR-QDFVTLK 490 Query: 418 KELYQIKDYIAIEQARFGDKLTVIYDIDE-EVNCCIPSLLIQPLVENAIVHGIQPCKGKG 476 +E+ I Y+ I +ARFG +LTV +ID + IP L +QPLVENA+ HG+ P Sbjct: 491 EEMEGIAAYLEIVKARFGSRLTVKTEIDPILLEAPIPLLTLQPLVENAVQHGLFPKLSHC 550 Query: 477 VVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLH 536 V+TI+ + I VRD G GI + + + A + G IG+ NV+ R+ +YG+ Sbjct: 551 VLTIAAGLRDGAMVIEVRDNGVGIPVEKLRTILAGQ--GQGIGIRNVYKRLTGIYGKEYG 608 Query: 537 I---RRLEPGTEIAFYIPNQRTPVA 558 + L GT + IP + +A Sbjct: 609 LAIESTLGQGTTVRIVIPYEGRDLA 633 >UniRef50_Q5WAM1 Two-component sensor histidine kinase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WAM1_BACSK Length = 597 Score = 557 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 195/588 (33%), Positives = 325/588 (55%), Gaps = 31/588 (5%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 +F +LL + +R L+++ F R+R FR ++ + + K+ F F + T+SG Sbjct: 1 MFELLLLMLERLGLIVMLAFIATRMRFFRVMVKSTRLTRKQTWTAILFFGAFGIIGTYSG 60 Query: 64 VPVEG----------------SLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIG 107 V + ++ N R+I V+ G+ G VG+ G+IAG+HR L +G Sbjct: 61 VTFQAESLVLQRITFGIQEDAAIANFRVIGVVLAGLFGGYKVGLSAGLIAGVHRML--LG 118 Query: 108 GVTAIPCFITSILAGCISGWINLKIPKA-QRWRVGILGGMLCETLTMILVIVWAPTTALG 166 G TA C I +I+AG + + K P A R L G L ET+ M L+ + A TA Sbjct: 119 GFTAFSCGIATIVAGLFAAFYRSKNPNAVNRPLSIFLLGALAETVQMGLIALLANPTAAA 178 Query: 167 IDIVSKIGIPMIL-GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVN 224 I +V IG+PMI+ + +L++QSV E++ + A QA+ +L IA +TL F+ ++ Sbjct: 179 ISLVQTIGLPMIVANGIGCTLFLLIIQSVTKEEQKAGALQAQKSLRIAEQTLAHFKHGLS 238 Query: 225 SESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKII 284 S S ++VC+I+ +++A A+A+TN D +LA++GV +++ + T + + ++I Sbjct: 239 SHSAKEVCDILYKELNACAIAMTNQDMILAHIGVAADHHKTNMSIQTKLTAEVIAKKQMI 298 Query: 285 IKNNDEAHR---TPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIIS 341 I +DE H + + ++ PL + V GTLK Y+ +IT EM GL+ ++S Sbjct: 299 IAGDDEIHCKEPNCPLGAAVIAPLIIRAEVVGTLKFYFHSKKEITELETEMLSGLTNLLS 358 Query: 342 TQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRY 401 +QLE++ A++ ++A +AE+ ALQ++I+PHFLFN LN + S IR+ P AR ++ +L+++ Sbjct: 359 SQLELAEADRAYQLAKEAEINALQAQISPHFLFNTLNTVISLIRIEPMKARTMLHSLAQF 418 Query: 402 LRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPL 460 LR N+ + + +EL+ IK Y++IE+ RF +LTV Y IDE ++ IP L +QPL Sbjct: 419 LRQNVSATTTKLHSLAEELHHIKAYLSIEEVRFEGRLTVQYKIDERFLHVSIPPLTLQPL 478 Query: 461 VENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN---EMPGNK 517 VENA+ HG + + V+ ISV E G V ++V+D G G DP ++++ G Sbjct: 479 VENAMKHGFKNKRSDCVLIISVQEQGEDVVLSVQDNGAGFDPDKLKKLGNELPATDSGTG 538 Query: 518 IGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRTPVASQAT 562 IGL N + R++++YG + + GT + F IP Sbjct: 539 IGLYNSNKRLQMMYGPEASLAFSAQPGRGTLVRFRIPKLARKDREHHE 586 >UniRef50_Q3AA02 Sensor histidine kinase n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AA02_CARHZ Length = 552 Score = 545 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 197/564 (34%), Positives = 319/564 (56%), Gaps = 26/564 (4%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 + + + + +R ++++ FF+ + RLFR +L + + ++ L + F LF + T+ G Sbjct: 1 MNELFINLIERLSVIITLAFFVSKTRLFRNILQQE-LTIRQKLGLILGFGLFGIIGTYWG 59 Query: 64 VPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGC 123 +P++G++ N R++ GI+ GP G++ G+IAG+HR +GG TA+ C I++ + G Sbjct: 60 IPIKGAIANSRVVGPAIAGIIGGPAAGLLAGLIAGVHRAW--LGGFTAVACGISTTVEGL 117 Query: 124 ISGWINLKIPKAQ-RWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMI-LGS 181 I+G + + P+ + GIL GM ETL MI++++ A + +V IG+PMI + Sbjct: 118 IAGVLARRFPEKRFNVVFGILTGMFIETLQMIIILLLARPFEDALSLVKVIGLPMILVNG 177 Query: 182 VCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDDIH 240 + IG +L+++S EKE A A+ AL+IAN+TLP+ R +N E+ KV II + Sbjct: 178 IGIGVFLLILESTVKEKEHIGAVYAEKALNIANETLPILREGLNRETAFKVSRIILNKTD 237 Query: 241 ADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRT----PE 296 ADAVA+T+ + +LA+VG GE ++ +G + T +A+N G++ + N EA + Sbjct: 238 ADAVALTDKNIILAHVGSGEDHHLSGTPIKTAATAKALNNGELTVVLNKEAIGCSNSNCK 297 Query: 297 IHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMA 356 + S ++ PL+ + V G LK+YY +I GLS++ISTQLE+S E ++ Sbjct: 298 LASAVIAPLFIRNEVVGALKLYYNKPDKIGEFTITFIEGLSRLISTQLELSMLEHQAKLL 357 Query: 357 NKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDI 416 +AEL+ALQ++INPHFLFN+LN I + R NPD AR+LI LS Y R N+ + I + Sbjct: 358 ARAELKALQAQINPHFLFNSLNTIVALCRKNPDQARELIIKLSEYFRRNLREW-EPLIPL 416 Query: 417 KKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGK 475 +EL ++ Y+ E+ARF DKL V +ID++V +P ++ LVENA+ HGI P K Sbjct: 417 AEELKNVELYLTFEKARFSDKLQVNLNIDDKVKEVMVPPFAVETLVENAVKHGILPKK-G 475 Query: 476 GVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLY---G 532 G+V I+ N+ I + D G G+ V +GL N+ R++ L+ G Sbjct: 476 GLVQINAKLQDNKAVIEIVDNGVGLREDV----------KVGVGLSNLKERLRNLFREEG 525 Query: 533 EGLHIRRLEPGTEIAFYIPNQRTP 556 + R + GT IP Sbjct: 526 QFYLYSREDGGTISRLIIPLLSKE 549 >UniRef50_C0Z808 Two-component sensor histidine kinase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z808_BREBN Length = 571 Score = 540 bits (1393), Expect = e-152, Method: Composition-based stats. Identities = 176/566 (31%), Positives = 310/566 (54%), Gaps = 17/566 (3%) Query: 7 MLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPV 66 MLL + + +++ + + ++ FR +++ + ++ ++ +F ++ T +G+ V Sbjct: 5 MLLGLLEDISVIAVIALIIGQLDYFRNIMYGKNN-WMRIVILSTLFGFLSVIGTENGLRV 63 Query: 67 EGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISG 126 +L N RI+ ++GG++ GP VG + G+I GIHRY IGG TA C I++++ G ++G Sbjct: 64 NDALANTRIVGAVAGGLIGGPVVGFLAGLIGGIHRY--SIGGFTAFACAISTVMNGYLAG 121 Query: 127 WINLKIPKAQ-RWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPM-ILGSVCI 184 ++ K+ + +W+ +L G+ E + ++V++ A + +++ KI IP I+ + Sbjct: 122 IVSTKMNMLRLKWQHIVLIGVTAELIQKVMVLLMAKPFSAALELEVKIAIPTTIMTIAGL 181 Query: 185 GFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDDIHADA 243 + Q+++ ++ S A A LAL IA++TLP R +N S +K E+IR+ DA Sbjct: 182 LLFTRVFQNLKMMQDQSGALGANLALSIASQTLPHLRTGLNEYSAKKTAELIREMAKVDA 241 Query: 244 VAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEA-HRTPEIHSMLV 302 VAIT+ + +L+ G N+ + + +N+ I + D A P + S+ Sbjct: 242 VAITDREKLLSAKGHELENHLQKETLCAQVAEAVLNHPTGIWCDKDFALPHPPRLKSINA 301 Query: 303 IPLWEKGVVTGTLKIYYCHAHQITSSLQE-MAVGLSQIISTQLEVSRAEQLREMANKAEL 361 L+ + GTL+ YY + TS E + GL++++S Q+E++ E +M +AE+ Sbjct: 302 ASLYHQNQKIGTLQFYYKTSSSKTSQTNEKLVDGLAKLLSVQIELAEIEHQAKMRKQAEV 361 Query: 362 RALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELY 421 ALQ++INPHFLFN L I S R +PD AR LI +LS R N++ K + +++EL Sbjct: 362 SALQAQINPHFLFNTLGTIMSYCRTDPDQARNLIGHLSDIFRRNLKSKGNHH-SLQEELD 420 Query: 422 QIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTI 480 IK Y+ IE+ RF ++L V +IDE + C +P L +QP+VENAI HG+ P ++TI Sbjct: 421 GIKSYLEIEKVRFSNRLKVNMEIDETLLECKLPVLTLQPIVENAIHHGLSPKVSDCLLTI 480 Query: 481 SVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI--- 537 V + V+I++ D G GI + + + ++ IGL+NVH R++ +YG+ + Sbjct: 481 RVEPYDHEVKISIEDNGVGISEERLAEIWNSQSK--GIGLINVHSRLQSIYGKKYGLTIQ 538 Query: 538 RRLEPGTEIAFYIPNQ--RTPVASQA 561 + GT ++F P V A Sbjct: 539 SQPGLGTVVSFVAPLSAFEKEVHPDA 564 >UniRef50_A6TN09 Signal transduction histidine kinase, LytS n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TN09_ALKMQ Length = 559 Score = 537 bits (1385), Expect = e-151, Method: Composition-based stats. Identities = 186/558 (33%), Positives = 331/558 (59%), Gaps = 11/558 (1%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 I +++++ ++ +++I + +I +FR+L+ K + + + + +F + T+S Sbjct: 2 IIEIIVSLANKLGIIIILAILISKIGIFRKLVTKKNITIIDKIILAVVFGAIGILGTYSS 61 Query: 64 VPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGC 123 VPV G++ N R++ VM GG+L GP VG++ G+IAG HRY+IDIGG TA+ C + +I+ G Sbjct: 62 VPVNGAIANTRVVGVMVGGLLGGPVVGVMAGMIAGGHRYVIDIGGFTALACAVATIIEGF 121 Query: 124 ISGWINLKIP-KAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMI-LGS 181 I G+ + I K+Q+W+ + G+ E + M ++++ A +V I +PM+ + S Sbjct: 122 IGGYAHFYIKNKSQKWKYTLFIGIFAEIVQMAIILLIARPFGDAFTLVKIILLPMVLVNS 181 Query: 182 VCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDDIH 240 + I + +++++ E E AA QA+ L IAN+TLP FR +N E ++V II + Sbjct: 182 IGISLFIGIIENIHQEYERIAAGQAEKTLKIANQTLPYFRQGLNEEVAKEVVNIIYHTVD 241 Query: 241 ADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRT----PE 296 AV ITN +LA+ G E ++ + +TR + G+ + + + + Sbjct: 242 VAAVTITNCKEILAHKGAEEDHHVPMCKLQTQSTRDVVISGEHRVIFHQRDIQCDQPKCQ 301 Query: 297 IHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMA 356 + S++++PL E+ V GTLK+Y + IT+ E+A+GL+Q+ STQ+E+SR + +++ Sbjct: 302 LKSVIIVPLKEREEVVGTLKLYKREENSITTLDVELALGLAQLFSTQIELSRLDYQKKLL 361 Query: 357 NKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDI 416 +AEL+ LQ++INPHFLFN +N I S ++++P A+QL+ +L+ R ++ + + +D+ Sbjct: 362 AEAELKTLQAQINPHFLFNTINTIVSFVQVDPTQAKQLLISLADLFRKSLS-NNQDMVDM 420 Query: 417 KKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKG 476 + E+ + Y+ IE+ARFGD+L V Y++ E + C +P L++QPLVENA++HGI P +G G Sbjct: 421 ETEIEHVASYLEIEKARFGDQLKVKYELQENITCKLPPLILQPLVENAVIHGILPKRGGG 480 Query: 477 VVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLH 536 + I + N V + + D G GI + + + + +GL+NV+ R+ LYGE Sbjct: 481 EIKILSKKLENCVLLEIVDNGLGISQERLLTILKPVIDSKSVGLMNVNKRLINLYGEAYC 540 Query: 537 I---RRLEPGTEIAFYIP 551 + ++ GT+I IP Sbjct: 541 LEVSSEVDHGTKIQVKIP 558 >UniRef50_A0PY88 Two-component sensor kinase n=2 Tax=Clostridium RepID=A0PY88_CLONN Length = 553 Score = 534 bits (1377), Expect = e-150, Method: Composition-based stats. Identities = 244/551 (44%), Positives = 366/551 (66%), Gaps = 7/551 (1%) Query: 6 NMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVP 65 ++ ++ + ++ F L + + ++ K S K+L+ ++ +F + T+ G Sbjct: 2 ELIKSLINNIGYFILIAFVLSQCESLKNIIIKEEFSKKDLVILSILFGGLGILGTYIGTE 61 Query: 66 VEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCIS 125 + G++ N RI+ VM+GGI GP +GI + +I+G HR LID GGVTAIPC IT++ +G I Sbjct: 62 IHGAIANTRIVGVMAGGIFCGPIIGIASSIISGTHRLLIDSGGVTAIPCAITTVASGFIG 121 Query: 126 GWINLKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPM-ILGSVCI 184 G ++ + RW G +GG++ ETL MIL+++++ L + IV I IPM ++ I Sbjct: 122 GILHKYANQTNRWIYGFIGGIVVETLEMILILIFSKPFDLAVHIVKNIYIPMGFANAIGI 181 Query: 185 GFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIHADAV 244 ++LL++++ +KE AA+QAKLALDIANKTLP FR ++S S K+C+II+ I ADAV Sbjct: 182 SLLILLIENIYEQKEEVAAKQAKLALDIANKTLPYFRDMDSRSFEKICKIIKKSIKADAV 241 Query: 245 AITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRT----PEIHSM 300 AIT+ HVLA+VG+GE ++ G + ++ T + + GKI+I N + S Sbjct: 242 AITDKKHVLAHVGLGEEHHIKGAEILTQATERVIKEGKILILTNASEINCAYPFCPLKSG 301 Query: 301 LVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAE 360 +++PL E+ + GTLKIYY + I+ + +A+GLSQIISTQLE+S+ +L++MA KAE Sbjct: 302 IILPLKERNNIIGTLKIYYGKNNSISFKNKNLAIGLSQIISTQLEISKIGKLKKMATKAE 361 Query: 361 LRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKEL 420 ++ALQ++INPHFLFN+LN I+S +R+NP AR+LI NLS +LRYN+E+ DE +D+ EL Sbjct: 362 IKALQTQINPHFLFNSLNTIASFVRINPAKARELIINLSVFLRYNLEI-GDELVDVYSEL 420 Query: 421 YQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTI 480 Q+K Y+AIE+ARFG+KL VIY+I + ++ +PSL+IQP+VEN+I HGI KG+V I Sbjct: 421 EQVKAYVAIEKARFGEKLQVIYNIQDNIDIKMPSLIIQPIVENSIKHGILKSGRKGIVKI 480 Query: 481 SVAECGNR-VRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRR 539 + + +AV D G GI+ +IE+V M NKIG+ NV++R+KLLYGEGL I R Sbjct: 481 DIKYINDYAFEVAVEDNGVGIEKDIIEKVYNGTMKENKIGISNVNNRLKLLYGEGLKIER 540 Query: 540 LEPGTEIAFYI 550 LE GT +F I Sbjct: 541 LEEGTRASFII 551 >UniRef50_B8DLB4 Signal transduction histidine kinase, LytS n=2 Tax=Desulfovibrionales RepID=B8DLB4_DESVM Length = 603 Score = 533 bits (1373), Expect = e-150, Method: Composition-based stats. Identities = 174/596 (29%), Positives = 296/596 (49%), Gaps = 44/596 (7%) Query: 2 HEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTW 61 + + + + R L+L F ++ + ++ + + A+F +F + T+ Sbjct: 7 PHVPELFITLTQRFGLLLAGGFAIMTVAPLDKVGPGRSRPLWATALLVAMFGMFGILGTY 66 Query: 62 SGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILA 121 +G V S N+R + V++ G+ GP VG G+IA HRYLID+GG +A+PC + ++ Sbjct: 67 TGNFVFQSFANLRAMGVITAGLFGGPVVGAGAGIIAAGHRYLIDVGGFSALPCGLATLSE 126 Query: 122 GCISGWINLKIP-KAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL- 179 G ++G + + P + W + G++ ET M LV+ A +++V I +PMIL Sbjct: 127 GILAGLVAWRFPERRLDWATALTLGLIGETYHMGLVLWLAEPFTEAVELVRVISLPMILI 186 Query: 180 GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDD 238 ++ V ++ ++ + QA+ L IAN+TL R + S + EII D+ Sbjct: 187 NAMGAALFVQALRLQLHFRDLRDSTQARQILSIANRTLSHLRSGLTRASAQATAEIILDE 246 Query: 239 IHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRT---- 294 H AVA+T + VLA+VG G+ ++ G + TR+ G+ + + ++ Sbjct: 247 THVAAVALTGGELVLAHVGAGDDHHMPGFQVRTMATRRVAETGEPLFVRDRDSIGCRQPG 306 Query: 295 PEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLRE 354 + +++PL + G + G LK+Y + + E+A GL+ + STQ+E+ + Sbjct: 307 CPLTDAIIVPLRKGGQILGCLKLYGTKNRPLDQTRFELAKGLADLFSTQIELEEIGIKNQ 366 Query: 355 MANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQI 414 + +AE+R LQ++INPHFLFN+LNA++S R P AR LI +L+RY+R N++ I Sbjct: 367 LIARAEIRRLQAQINPHFLFNSLNAVASFCRTAPGQARDLILDLARYMRRNLDSSRGA-I 425 Query: 415 DIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCK 473 + +EL Q++ Y+ IEQARFGD++ D+ + IP LLIQPLVEN++ HGI + Sbjct: 426 RLSEELEQVRSYLVIEQARFGDRIRADIDLAPGTADWLIPPLLIQPLVENSVRHGILARE 485 Query: 474 GKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMP------------------- 514 G+V +S G+ + + V D G G+D + A + Sbjct: 486 EGGLVRLSAHADGDHLLVTVEDDGAGMDDDTRNAILAPDASDLSPHMYVEARNEALYEAQ 545 Query: 515 -------------GNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQR 554 + IG N + R+ +YG + GT I+F IP Q+ Sbjct: 546 PGQTCSDTMVESLRDGIGARNCNQRLMQMYGPSYAMRIDSEPGRGTRISFRIPRQQ 601 >UniRef50_A8VV76 Signal transduction histidine kinase, LytS n=3 Tax=Bacillus RepID=A8VV76_9BACI Length = 625 Score = 530 bits (1367), Expect = e-149, Method: Composition-based stats. Identities = 192/588 (32%), Positives = 328/588 (55%), Gaps = 33/588 (5%) Query: 6 NMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVP 65 + + + +R ++++ F + RI +FR ++ + + + ++VT +F F + T++GV Sbjct: 39 ELFVIMLERLGIIVMVAFIMTRIPIFRRVVDDRSVTFSQKVSVTLLFGFFGIIGTYTGVV 98 Query: 66 V----------------EGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGV 109 V + ++VN R+I ++ G+L G VG+ GVIAG HR+L +GG Sbjct: 99 VSTGQASYMMWLSELAEDEAIVNARVIGIVVAGLLGGWKVGLGAGVIAGGHRFL--LGGF 156 Query: 110 TAIPCFITSILAGCISGWINLKIPKAQRWRVG--ILGGMLCETLTMILVIVWAPTTALGI 167 T C +++I+AG ++G+ + + K + +G G L ET+ M ++++ A Sbjct: 157 TGFACGLSAIIAGLLAGFAHRYVDKGKNISLGVTFFVGALSETIQMGIILLVARPYEQAF 216 Query: 168 DIVSKIGIPMIL-GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNS 225 +V IG+PMIL V VL+++SV E+E AA Q+ AL IA T+ R + + Sbjct: 217 ALVEMIGLPMILANGVGAAVFVLIIRSVIREEEKLAAVQSGRALSIAEDTISFMRQGLTT 276 Query: 226 ESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIII 285 S + C+I+ ++ A AV++T+ + +LAY G G YQ G + TRQ +N G+ I Sbjct: 277 ASAGQTCQILLKEVGASAVSMTDRERILAYYGKGVDIYQAGGPIRTEATRQVLNQGEPYI 336 Query: 286 KNNDEAHRT----PEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIIS 341 + +T P+IH+ +++PL EK V GTLK Y+ +IT +E+ +GLS+++S Sbjct: 337 GTQNRQDQTENLYPDIHAAMIVPLMEKDSVIGTLKFYFPTEKEITPLKRELILGLSRLLS 396 Query: 342 TQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRY 401 QLE++R E+LR +A + E++ALQ++++PHFLFNALN I S IR +P+ AR+L+ +LS + Sbjct: 397 NQLELARVEELRHLAQETEVKALQAQVSPHFLFNALNLIVSMIRTDPERARKLLLSLSHF 456 Query: 402 LRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPL 460 R N+ + + +EL QI+ Y+ I++ARF +L V +++D+ +N IP+L +QPL Sbjct: 457 FRQNLAGTNQTWSTLGQELKQIESYLEIQEARFQGELNVRWEVDDTLLNWQIPTLTMQPL 516 Query: 461 VENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN---EMPGNK 517 +ENAI HG + + VT+ + VR+ + + G I + + + G Sbjct: 517 IENAIKHGRKAAREPLDVTVRIERVAESVRVTIWNNGRAIPHERLALLAKGPVHSEEGAG 576 Query: 518 IGLLNVHHRVKLL--YGEGLHIRRLEP-GTEIAFYIPNQRTPVASQAT 562 IGL NVH R+ + GL IR + GT I+F + + + Sbjct: 577 IGLYNVHKRLTEMRVSEAGLSIRSDDQAGTSISFLLHRINQTERKEGS 624 >UniRef50_B1YHT0 Signal transduction histidine kinase, LytS n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YHT0_EXIS2 Length = 588 Score = 525 bits (1353), Expect = e-147, Method: Composition-based stats. Identities = 163/588 (27%), Positives = 297/588 (50%), Gaps = 34/588 (5%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 +F ++ + +R +M+I F L + R LL K + + + IF+ + + S ++G Sbjct: 1 MFELIPFLLERLGIMIILAFILAQWGPTRRLL-KQPEAGWQFGLLILIFATYGILSNYTG 59 Query: 64 VPVE----------------GSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIG 107 V V+ ++ N R + V+ G+L GP G ITG++ GIHRY +G Sbjct: 60 VKVDLAKFLPHTWLEQVDGTSAIANTRTMIVVISGLLAGPIGGTITGLLVGIHRY--TLG 117 Query: 108 GVTAIPCFITSILAGCISGWINLKIPK--AQRWRVGILGGMLCETLTMILVIVWAPTTAL 165 G TA C +++++AG +SG + R + I M L+++++ Sbjct: 118 GFTAFACALSTVVAGGVSGLLRPYWRDRLGSRALLPICLTGFLMVFEMSLILLFSDPFPA 177 Query: 166 GIDIVSKIGIPM-ILGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLF-RHV 223 ++++ I +PM ++ + + + +++ E+E AR+A+ +L IA+ TLP R + Sbjct: 178 ALELIQFIFLPMTVVNVLGVWLFLSIIRLAAREEEHVRAREAERSLHIADLTLPHLTRGL 237 Query: 224 NSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKI 283 ++ V +I+ ADAV++T+ +LA++GVG ++Q+G + + T + G++ Sbjct: 238 TIQTAEAVADILLQQTRADAVSLTDQSVILAHIGVGSDHHQSGGHWTTRPTEHVLTDGQL 297 Query: 284 IIKNNDEAHRT----PEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQI 339 + + + + + ++ PL GTLK+YY H + + E+ GL+++ Sbjct: 298 RLVTDRDEIGCPKADCPLQAGIIAPLTIGETTIGTLKVYYPHPELLDAVEVELIEGLAKL 357 Query: 340 ISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLS 399 STQL + +AE+ + AE+RAL+++I+PHFLFNA+N I + R + + AR L+ LS Sbjct: 358 FSTQLALGKAERQAGLLKDAEIRALEAQIHPHFLFNAINTIYALCRTDVEQARTLLLELS 417 Query: 400 RYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQ 458 + R N++ +I ++KEL I+ YI++E ARF + V D+++ +P ++Q Sbjct: 418 TFFRSNLQGARSTKIPLQKELEHIEAYISLEAARFPSRPFVDIDLEDGTEQLLVPPFVLQ 477 Query: 459 PLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN--EMPGN 516 PL+ENA H P G V ++ +++ + V D G GID + + R+ E G Sbjct: 478 PLIENAFQHAFSP-GQTGYVGVTAWLTADQLVLEVVDNGRGIDAERLTRLGREVVESNGT 536 Query: 517 KIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRTPVASQA 561 L N R+K LY E + GT I ++P + S A Sbjct: 537 GTALFNTAERIKSLYAENGSFRLTSQPGEGTTITIHLPIETGKEVSHA 584 >UniRef50_C5TXS9 Signal transduction histidine kinase, LytS n=2 Tax=Desulfovibrio RepID=C5TXS9_DESVU Length = 627 Score = 519 bits (1338), Expect = e-145, Method: Composition-based stats. Identities = 160/483 (33%), Positives = 264/483 (54%), Gaps = 9/483 (1%) Query: 1 MHEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFST 60 + I M + + +R L+L F ++ + +L S + + +FSLF + T Sbjct: 4 VPYIPPMFITLSERFGLLLAGGFAIMTLAPLDKLGPGRTRSWRATALLVVLFSLFTILGT 63 Query: 61 WSGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSIL 120 ++G V S N+R + ++ G+ GP VG +TG+IAG HRY ID+GG +A+PC + + L Sbjct: 64 YNGNIVFQSFANLRAMGAVTAGLFGGPMVGALTGLIAGGHRYFIDVGGFSAVPCGLATFL 123 Query: 121 AGCISGWINLKIP-KAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMI- 178 G +G + P ++ W + + E + M LV+ A A +D+V IG+PMI Sbjct: 124 EGLAAGLFAWRFPSRSLDWGTAMTFAAVGEAVHMCLVLGLARPYAQAVDLVEVIGLPMIL 183 Query: 179 LGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRD 237 L V V ++ ++ + QA+ L IAN+TLP R +++ S R EII D Sbjct: 184 LNGVGAAIFVQALRMQMHFRDLRDSSQARQILSIANRTLPHLRAGLSAASARATAEIILD 243 Query: 238 DIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRT--- 294 + AVA+T+ D V+A+VG +++ G + TR+ G + + Sbjct: 244 ETRVAAVALTSNDMVMAHVGAASDHHRAGHSVCTQATRRVATDGIPLFVTGHDEIGCQLE 303 Query: 295 -PEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLR 353 + S +++PL + + G LK+Y + +L E+A GL+ + +TQ+E+ Sbjct: 304 ACPLCSAIIVPLRKGDTILGCLKLYGTKDRPLDQTLFELAKGLADLFATQIELEDIGIKN 363 Query: 354 EMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQ 413 ++ +AE+R LQ++INPHFLFN+LN ++S R P AR+LI +L+RY+R N++ E Sbjct: 364 QLLARAEIRRLQAQINPHFLFNSLNTVASFCRTAPGQARELILDLARYMRRNLDTS-REA 422 Query: 414 IDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPC 472 I + +E+ QI+ Y+ IE+ARFG+++ + DID E C +P LLIQPLVEN++ HGI Sbjct: 423 IHLAEEVEQIRAYLVIEKARFGERIRAVIDIDPETEHCLVPPLLIQPLVENSVRHGILGN 482 Query: 473 KGK 475 + Sbjct: 483 EEG 485 >UniRef50_C4XJP3 Sensor protein LytS n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XJP3_DESMR Length = 605 Score = 519 bits (1338), Expect = e-145, Method: Composition-based stats. Identities = 168/570 (29%), Positives = 286/570 (50%), Gaps = 33/570 (5%) Query: 2 HEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTW 61 E+ + + + R L+L F ++ + F + AVT +F +F + T+ Sbjct: 8 PEVPGLFVHLSQRFGLLLAGGFAIMTLAPFERMGLGQKRPAWATAAVTVLFGVFGILGTY 67 Query: 62 SGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILA 121 +G V S N+R + V++ G+ GP VGI G+IAG HRYLID+GG +A+PC + + L Sbjct: 68 TGNAVFHSYANLRAMGVITAGLFGGPVVGIGAGLIAGGHRYLIDVGGFSALPCALATFLE 127 Query: 122 GCISGWINLKIP-KAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL- 179 G +G I + P ++ W + G++ ET+ M LV+ + +++V IG PMI+ Sbjct: 128 GAAAGLIARRFPGQSLDWGWAMALGLVGETVHMGLVLALSRPFGEALELVKVIGAPMIVI 187 Query: 180 GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDD 238 ++ ++ +E + +A+ L IA++T+P R + ES + IIR + Sbjct: 188 NAMGAAIFTRALKLQRSLRERQDSTEARRILSIASQTVPHLRGGLTPESAQATAAIIRKE 247 Query: 239 IHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRT---- 294 AVAIT +LA+VG G+ ++ G+ + + TR + G + + E+ Sbjct: 248 TGVAAVAITGDSTILAHVGAGQDHHLAGEPWRTRATRLSYESGAALFLRDQESIGCALPD 307 Query: 295 PEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLRE 354 + +++PL + + G LKIY A + L E+A GL+ + STQLE+ + Sbjct: 308 CPLREAIIVPLRKGAAIRGCLKIYGTKARPLDQPLFELAKGLADLFSTQLELEDIGIKNQ 367 Query: 355 MANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQI 414 + AE+ LQ++INPHFLFN+LN I+S R P AR+L+ +L+RY+R N++ I Sbjct: 368 LLAHAEISRLQAQINPHFLFNSLNTIASFCRTAPGQARELLLDLARYMRRNLDSSRG-LI 426 Query: 415 DIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN----------CCIPSLLIQPLVENA 464 + +E+ Q++ Y+AIEQARFGD++ D++ VEN+ Sbjct: 427 RLSEEMEQVRSYLAIEQARFGDRIVSEIDLEPGCEDWLLPPLLIQPL---------VENS 477 Query: 465 IVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGN---KIGLL 521 + HG+Q G VT++V + + V D G G+ P+ R+ + + G+ +G Sbjct: 478 VRHGLQGRPEGGRVTVTVRRRDGHLWVEVADEGLGMSPETRARILSPDAAGSLTEGVGAR 537 Query: 522 NVHHRVKLLYGEGLHI---RRLEPGTEIAF 548 N + R+ L+G + G I F Sbjct: 538 NTNQRLVQLFGHDYALCIESAPGEGARIVF 567 >UniRef50_Q4A009 Sensor protein lytS n=84 Tax=Bacilli RepID=LYTS_STAS1 Length = 591 Score = 518 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 170/590 (28%), Positives = 309/590 (52%), Gaps = 34/590 (5%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 + N+ + + +R L+++ + L+ I F+ ++++ + + IF F++ S ++G Sbjct: 1 MLNLFILLLERVGLIILIAYILMNINHFKTMMNEREK-RRSQWQLIIIFGCFSMISNFTG 59 Query: 64 VPVEG----------------SLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIG 107 + + G SL N R++ + G++ GP+V + VI+G++R + IG Sbjct: 60 IQIRGDEIINGTVYNHLDPDASLANTRVLTIGVSGLIGGPFVALAVAVISGMYR--VYIG 117 Query: 108 GVTAIPCFITSILAGCISGWINLKIPKAQRWRV---GILGGMLCETLTMILVIVWAPTTA 164 G A I+SI ISG+ K +A R+ G G E + M+ +++++ T Sbjct: 118 GADAYIYLISSIFIALISGYFGYKAMRANRYPTIVKGACIGGTTEIIQMLCILLFSDNTE 177 Query: 165 LGIDIVSKIGIPMI-LGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-H 222 +V I IPMI + S+ + ++ S ++E + A Q L +AN+TLP FR Sbjct: 178 HAWTLVKLIAIPMISINSIGTAIFLSIILSTIKQEEETRAIQTHDVLQLANQTLPYFRSG 237 Query: 223 VNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGK 282 +N +S +K EII + + AVAITN +L +VGV ++ I+ +++A+ G Sbjct: 238 LNEQSAKKAAEIILNLMRVSAVAITNRKDILTHVGVASDHHVAQKAIITNLSKRAIQSGT 297 Query: 283 IIIKNNDEAHRT----PEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQ 338 + + E + + +V+PL K V GTLK+Y+ + + + S +++A GL++ Sbjct: 298 LKEAYSSEEIGCNHPGCPLEAAIVVPLRVKNDVVGTLKLYFTNKYDVNYSDKQLATGLAE 357 Query: 339 IISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNL 398 I S+QLE+ +AE + AE+++LQ+++NPHF FNA+N IS+ IR++ + AR+L+ L Sbjct: 358 IFSSQLELGQAETQSALIRDAEIKSLQAQVNPHFFFNAINTISALIRIDSEKARELLLQL 417 Query: 399 SRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLI 457 S++ R N++ + I ++KEL Q++ Y+++EQAR+ D+ V +DID +P I Sbjct: 418 SQFFRSNLQGARNNTISLEKELQQVESYLSLEQARYPDRFNVSFDIDRTCYGALVPPFAI 477 Query: 458 QPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEA---NEMP 514 Q LVENAI H + K + + + + I+V D GHGI + ++++ + Sbjct: 478 QILVENAIKHAFKNRKYNNEIIVKAHKAQTGLVISVSDNGHGIPYEKLDKIGKTSVHSES 537 Query: 515 GNKIGLLNVHHRVKLLYG--EGLHIRRLEPGTEIAFYIPNQRTPVASQAT 562 G L N++ R+ L+G L I GT+++ IP + Sbjct: 538 GTGSALENLNRRLDGLFGYEASLQIHSDHQGTQVSCTIPYHNLEEEKIES 587 >UniRef50_A4J8Q8 Signal transduction histidine kinase, LytS n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J8Q8_DESRM Length = 568 Score = 518 bits (1335), Expect = e-145, Method: Composition-based stats. Identities = 188/569 (33%), Positives = 303/569 (53%), Gaps = 30/569 (5%) Query: 11 VFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPV---- 66 + R ++ F R + FR LL + K L + IF +F + T++G+ V Sbjct: 1 MAQRMGFIVAIAFLFTRWQGFRSLLENRP-TLKGKLYLGVIFGIFGIIGTYTGITVTPRE 59 Query: 67 -----------EGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCF 115 E ++ N R I VM GG+L GP G++ G+IAG+HR + +GG T + C Sbjct: 60 VQNLFPGTLAYEDAIANSRAIGVMVGGLLGGPLTGLLAGLIAGVHR--MSMGGFTDMACG 117 Query: 116 ITSILAGCISGWINLKIP-KAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIG 174 I+++ G ++G I K+ K V ++ G+ E M ++++ A + +V I Sbjct: 118 ISTVYEGLLAGVIYYKMKQKTLTPGVALMTGLAGEIGQMAIILMVAQPFYKALALVKIIA 177 Query: 175 IPMIL-GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVC 232 +PMIL S+ I + +VQ+V + A QA+ AL IA+KTL R +N ES Sbjct: 178 MPMILANSLGIALFIAIVQTVVENERTIGAIQAQRALAIADKTLAHLRKGLNHESALATA 237 Query: 233 EIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAH 292 +II ++ A AVAITN + +LA+VG G ++ G ++ TR+ + +G++ I + + Sbjct: 238 QIIYEESCAGAVAITNQEMILAHVGEGSDHHHPGAPILTKVTREVLQHGQLAIAASPQEI 297 Query: 293 RT----PEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSR 348 + S +V+PL+ + GTLK+Y Q+ + E+A GL+Q+ STQLE+ Sbjct: 298 LCTNVHCALQSAVVVPLYNGKGIVGTLKLYSVRRQQLDRLMVELARGLAQLFSTQLELGE 357 Query: 349 AEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIEL 408 AE+ + AE++ALQ++INPHFLFNALN + S IR PD AR ++ +L Y+R N++ Sbjct: 358 AEKQARLVQDAEIKALQAQINPHFLFNALNTVVSLIRTKPDEARSVLIHLGTYIRQNLKS 417 Query: 409 KDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVH 467 ++ +++ EL ++ Y+A+ QARF +L V +I ++ IP L +QPLVENA+ H Sbjct: 418 SLNKWTNLETELKHVEAYLAVVQARFSHRLRVEMNIPLTLHGVVIPPLTLQPLVENAVQH 477 Query: 468 GIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPG-NKIGLLNVHHR 526 G + I + +VRI+V D G GI+ +E + E IGL+NVH R Sbjct: 478 GFPRITENSSIIIEAVQQEKQVRISVTDNGVGIERDRVEELLKAEKRSDGGIGLINVHSR 537 Query: 527 VKLLYGEGLHI---RRLEPGTEIAFYIPN 552 + ++G + GT + F IP Sbjct: 538 LISIFGPQAGLSIHSEPGAGTRVEFSIPI 566 >UniRef50_A1HLU7 Signal transduction histidine kinase, LytS n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HLU7_9FIRM Length = 560 Score = 518 bits (1334), Expect = e-145, Method: Composition-based stats. Identities = 176/568 (30%), Positives = 298/568 (52%), Gaps = 21/568 (3%) Query: 1 MHEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFST 60 M I +L + AL+ I + R+ R L S + + + + +F F+ F Sbjct: 1 MPNIGPLLWDIVRNVALVGIGAYLTTRLPTIRRTLTASEYRLLDRIILAMVFGAFSAFGN 60 Query: 61 WSGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSIL 120 W G+PV GS N RI+ ++GG+L GP VGI G+I I RY + GG T + +I+ Sbjct: 61 WIGIPVMGSFANTRIVGPVAGGLLGGPLVGIGAGIIGAIPRYFM--GGFTMWAAVLANIV 118 Query: 121 AGCISGWINLKIPKAQ-RWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMI- 178 AGCISG ++ K + +V + +LCE + +LV+ + + ++ I +P I Sbjct: 119 AGCISGLVHKKCGAQRINLKVALATALLCEIVLKVLVLTLSKPFSAAWELEKVIALPTIT 178 Query: 179 LGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLF-RHVNSESLRKVCEIIRD 237 S+ +G + +V+ V E+E + AR A+ A+ + +T + +N+++ V +II Sbjct: 179 ANSLAVGLFIYIVRDVFAEQEKAQARSAQQAIRMLQQTSGFMHKGLNNDTAGNVAQIIYR 238 Query: 238 DIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRT--- 294 + +A AVAIT+T+ VLA+VG G +++ G ++ T+QA+ + II NN Sbjct: 239 ETNAAAVAITDTEKVLAFVGAGADHHRPGQPILTGATKQAIKDRRTIIINNKNEVGCPDK 298 Query: 295 -PEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLR 353 ++ +++ +PL + G++K+Y I+S E+ G++ +S QL + + + Sbjct: 299 GCQLTAVVAVPLIVSDELVGSIKLYKSGNEVISSYEAELIRGIADFLSLQLAQRKLVEQQ 358 Query: 354 EMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQ 413 + +AE L+++INPHFLFN L I + R++P AR LI +LS +LR + +++E Sbjct: 359 MLLAQAEYNMLKAQINPHFLFNTLGTIRAMTRIDPSAARALIKDLSDFLRKVLN-REEEI 417 Query: 414 IDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPC 472 I +++EL ++ Y+ I+ RF D+L I EE ++C +P +QPLVENA+ HG+ P Sbjct: 418 ISLREELETVRTYVRIQCERFQDRLRFFEHIPEELLDCRVPVFSLQPLVENAVKHGVSPK 477 Query: 473 KGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYG 532 K G V + + + + IAV D G G E IGL NVH R+++LYG Sbjct: 478 KTGGTVVLRAWKDQDDLCIAVEDDGVGFSAAKRE-------TSGGIGLYNVHKRLQILYG 530 Query: 533 EGLHI---RRLEPGTEIAFYIPNQRTPV 557 + + GT + +P R V Sbjct: 531 NRYGLRIESAEKEGTRVIIRLPEVRAGV 558 >UniRef50_Q814J0 Sensor protein lytS n=83 Tax=Bacillaceae RepID=LYTS_BACCR Length = 589 Score = 513 bits (1321), Expect = e-144, Method: Composition-based stats. Identities = 195/587 (33%), Positives = 322/587 (54%), Gaps = 38/587 (6%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 + N++L + +R L++I F L I+ FR LLHK + L + IFS+F + S ++G Sbjct: 1 MLNLVLMMIERVGLIVILGFLLSHIKTFRRLLHKQDGYV-DKLKLICIFSVFTIVSNYTG 59 Query: 64 VPVEGS----------------LVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIG 107 + + G+ + N RI+ V G+L GP VGI G IAGIHRY+ +G Sbjct: 60 IEIAGNTIMNENWLQGVSSSSTIANTRIMGVGISGLLGGPIVGIGVGSIAGIHRYM--LG 117 Query: 108 GVTAIPCFITSILAGCISGWINLKIPKAQR---WRVGILGGMLCETLTMILVIVWAPTTA 164 G TA+ C I+SILAG I+G+I K R + + + +L MI++++ Sbjct: 118 GTTALSCAISSILAGVITGYIGYIFKKYNRTITPKFSAILSVFIVSLEMIMILLIVED-- 175 Query: 165 LGIDIVSKIGIPMI-LGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-H 222 G+ IV I IPMI + S ++ ++Q++ ++E + A Q L IA+KTLP FR Sbjct: 176 -GMSIVKTIAIPMILVNSFGSFILLSMIQAILRQEENAKALQTHKVLRIADKTLPYFRQG 234 Query: 223 VNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGK 282 + ES + V +II DAV++T+T+ +LA+VG+ ++ I+ +++ ++ G+ Sbjct: 235 LTEESCKHVAQIIHRFPGTDAVSLTDTEKILAHVGLASDHHIPSHSLITGLSKEVLHTGQ 294 Query: 283 IIIKNNDEAHRT----PEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQ 338 I+ + E + + +VIPL G GTLK+Y+ + +Q++ +E+A GL++ Sbjct: 295 IMKAKSREVINCQHEGCPLQAAIVIPLTSHGNTIGTLKLYFKNPNQLSRVEEELAEGLAK 354 Query: 339 IISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNL 398 I STQLE+ AE ++ AE++ALQ++INPHFLFNA+N +S+ R + + AR+L+ L Sbjct: 355 IFSTQLELGEAELQSKLLQDAEIKALQAQINPHFLFNAINTVSALCRTDVEKARKLLLQL 414 Query: 399 SRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLI 457 S Y R N++ I +++EL ++ Y+++EQARF +K V I++E+ +P ++ Sbjct: 415 SVYFRCNLQGARQLLIPLEQELNHVQAYLSLEQARFPNKYEVKMYIEDELKTTLVPPFVL 474 Query: 458 QPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEA---NEMP 514 Q LVENA+ H + V + V E V V+D G GI+ + +E++ + Sbjct: 475 QLLVENALRHAFPKKQPVCEVEVHVFEKEGMVHFEVKDNGQGIEEERLEQLGKMVVSSKK 534 Query: 515 GNKIGLLNVHHRVKLLYGEG--LHIRRL-EPGTEIAFYIPNQRTPVA 558 G L N++ R+ L+G+ LHI GTEI F IP + Sbjct: 535 GTGTALYNINERLIGLFGKETMLHIESELNEGTEITFVIPKKVGEEE 581 >UniRef50_C5ETQ5 Signal transduction histidine kinase n=5 Tax=Clostridiales RepID=C5ETQ5_9FIRM Length = 565 Score = 510 bits (1314), Expect = e-143, Method: Composition-based stats. Identities = 175/549 (31%), Positives = 284/549 (51%), Gaps = 12/549 (2%) Query: 21 CLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPVEGSLVNVRIIAVMS 80 L +I + R +L + A+ IF L ++ ST++G+ +G++VN R+I V++ Sbjct: 19 IATMLTKIPVVRSMLLGENNPIGSRAALAVIFGLVSIVSTYTGMRAQGAIVNTRVIGVLA 78 Query: 81 GGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISGWINLKIPKAQRWRV 140 G+L GP+VG+ +I G+HRYL DIGG TA+ C I++ + G I + + + Sbjct: 79 AGLLGGPYVGMGAAIIGGLHRYLFDIGGFTAVSCAISTFVEGLIGSAFSRRFKAGKIDNT 138 Query: 141 G-ILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMI-LGSVCIGFIVLLVQSVEGEK 198 G L L E M++++ + +++V I PMI + ++ + + V E+ Sbjct: 139 GIFLITALAEVCQMVIILFISKPFPAALELVGLIAFPMITMNALGMVAFIGTFSIVFMEE 198 Query: 199 EASAARQAKLALDIANKTLPLFRH--VNSESLRKVCEIIRDDIHADAVAITNTDHVLAYV 256 ++ A + +LAL I ++LP R ++ + EII + AV IT+T VLA Sbjct: 199 DSQFAEKMRLALGIVEQSLPHLRKGLYSTRDMEAAAEIIYNSTSCAAVMITDTQKVLAMK 258 Query: 257 GVGEHNYQNGDDFISPTTRQAMNYGKIII---KNNDEAHRTPEIHSMLVIPLWEKGVVTG 313 G +N G + P + + D + + H ++ PL E G Sbjct: 259 GEARYNDLKGGALLKPILESIHDRKTTTFTCAEKPDPLYHILKNHIIVTAPLIEMDKPIG 318 Query: 314 TLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFL 373 +L + + A L+++ STQLE+S + +++ KAE +ALQS++NPHFL Sbjct: 319 SLTMVVRKHWVTSQPNLNFASELARLFSTQLELSDLDYQKQLRRKAEFKALQSQVNPHFL 378 Query: 374 FNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQAR 433 +NALN IS R NPD AR+LI LS Y R +E D +++ ELY + Y+ +EQAR Sbjct: 379 YNALNTISCVCRENPDRARELILTLSAYYRQTLE-NDQYMLNLHTELYHVSSYLELEQAR 437 Query: 434 FGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAV 493 F +KL V D+++++NC +PS ++QPLVENA+ +G +G V+I + V I+V Sbjct: 438 FEEKLQVDMDVEDDLNCLVPSFILQPLVENAVRYG-ADARGMRTVSIQARTIDDSVEISV 496 Query: 494 RDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGE--GLHIRRLEPGTEIAFYIP 551 D G GI +I ++ + E G +GL NVH R+K +YGE GL I G+ + F +P Sbjct: 497 SDKGPGIPKDIIIQMYSGEGRG-GVGLKNVHRRLKSIYGEDNGLKIETSSAGSRVWFRVP 555 Query: 552 NQRTPVASQ 560 Sbjct: 556 RTTGKDKEN 564 >UniRef50_Q5HLG3 Sensor protein lytS n=5 Tax=Staphylococcus epidermidis RepID=LYTS_STAEQ Length = 591 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 165/586 (28%), Positives = 313/586 (53%), Gaps = 34/586 (5%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 + N+ + + +R L+++ + L+ I F+ ++ + + + IF +F++ S ++G Sbjct: 1 MLNLFILLLERVGLIILLAYILMNINHFKTMMSERDK-WRSKFQLIIIFGIFSMISNFTG 59 Query: 64 VPVEG----------------SLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIG 107 + +E S+ N R++ + G++ GPWV II G+I+G+ R I G Sbjct: 60 IEIENGHIVSGDIYYHLSKDASMANTRVLTIGVSGLIGGPWVAIIVGIISGLCRLYI--G 117 Query: 108 GVTAIPCFITSILAGCISGWINLKIPKAQRW---RVGILGGMLCETLTMILVIVWAPTTA 164 G A I+SI+ ISG+ + K + + G + G + E + M ++++ Sbjct: 118 GADAYTYLISSIVIAIISGYFGHQTIKQNTYPSIKKGAIIGAITEIIQMGCILLFTNNLH 177 Query: 165 LGIDIVSKIGIPMIL-GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-H 222 I +VS I +PMI+ S+ + ++ S ++E A Q L +AN+TLP FR Sbjct: 178 HAITLVSFIALPMIIINSLGTAIFLTIILSTIKQEEQMRAVQTHDVLQLANETLPYFRSG 237 Query: 223 VNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGK 282 +N +S ++ EII + AVAITN +L ++G G ++ + I+ +++ + GK Sbjct: 238 LNEKSAQQAAEIILKLMQVSAVAITNKKDILTHIGAGSDHHVARKEIITDLSKEVIQSGK 297 Query: 283 IIIKNNDEAHRT----PEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQ 338 + + + E + +V+PL+ V GTLK Y+ + I++S Q++A GL+ Sbjct: 298 LKVAHTREGIGCHHPNCPLEGAIVVPLYIHNEVAGTLKFYFTDNNIISTSDQQLAKGLAN 357 Query: 339 IISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNL 398 I S+QLE+ +AE ++ AE+++LQ+++NPHF FNA+N IS+ +R++ + AR+L+ L Sbjct: 358 IFSSQLELGQAEMQGQLLKDAEIKSLQAQVNPHFFFNAINTISALVRIDSEKARRLLIQL 417 Query: 399 SRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLI 457 S++ R N+ + I ++KEL Q+ Y+++EQAR+ ++ + Y ID++ + IP +I Sbjct: 418 SQFFRSNLNGARNNTITLQKELQQVAAYLSLEQARYPNRFNIHYRIDDQCQDALIPPFII 477 Query: 458 QPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNK 517 Q LVEN+I H + K + + V+ + + I+V+D G GI ++ + + Sbjct: 478 QILVENSIKHAFKNRKKNNHIDVDVSMKQDYLSISVQDNGQGIPADQLDTIGYTTVTSTT 537 Query: 518 I---GLLNVHHRVKLLYG--EGLHIRRLEPGTEIAFYIPNQRTPVA 558 L+N++ R+ L+G L+I+ + GT ++ IP + + Sbjct: 538 GTGNALVNLNKRLTGLFGTTSALNIQSSQSGTTVSCLIPYKSSKEE 583 >UniRef50_A5VJZ2 Signal transduction histidine kinase, LytS n=13 Tax=Lactobacillaceae RepID=A5VJZ2_LACRD Length = 587 Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats. Identities = 175/593 (29%), Positives = 304/593 (51%), Gaps = 41/593 (6%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 + + + + +R L++I F L+ + LFR LL S K + +T +FS+FA+ + +G Sbjct: 1 MIYLTILMAERVGLIIILAFLLVSVPLFRRLLFNQTISAK--IQLTILFSIFAIMANMTG 58 Query: 64 VPV-----------------EGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLI-- 104 + + S+VN RI+ V GI+ GPWVG + G++AG+HR + Sbjct: 59 IEIDANNQLHNKIILTAISTNDSIVNARILGVSVAGIIGGPWVGSLVGLVAGVHRIIQGA 118 Query: 105 DIGGVTAIPCFITSILAGCISGWINLKIP---KAQRWRVGILGGMLCETLTMILVIVWAP 161 + G +P +S+L G +SG++ K G + G+L E++ M+ +++++ Sbjct: 119 PLQGWFYVP---SSVLIGALSGFLYHDRKSYFKVMTPWHGFIVGILMESIQMLFILLFS- 174 Query: 162 TTALGIDIVSKIGIPMI-LGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLF 220 G +V I +PMI + S+ + ++ ++E A Q L + N+TLP F Sbjct: 175 --PTGWALVKYIALPMILVNSLGTSIFLSIISMYLHQEEELRAMQTHSVLQLTNETLPYF 232 Query: 221 R-HVNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMN 279 R +N S ++V +II+ + DAV+IT+ +LA++G G+ ++ G+ + + + Sbjct: 233 RQGLNKSSAQQVVKIIKKYTNFDAVSITDRQRILAHIGAGDDHHIPGNRLETSLSSNVIK 292 Query: 280 YGKIIIKNNDEAHRT----PEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVG 335 G+I I NN + + + +V PL V GTLK+YY +T ++A+G Sbjct: 293 TGQIKIANNSKMIGCIDPNCPLEAAIVAPLRIGNEVIGTLKMYYTDQWHLTPVEIQLAIG 352 Query: 336 LSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLI 395 L +I + Q+ + AE ++ A+++ALQ++INPHF FNA+N IS+ +R + + AR+L+ Sbjct: 353 LCEIFANQIALGEAEVQAQLVRDAKIKALQAQINPHFFFNAINTISAILRRDQEKARELL 412 Query: 396 FNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSL 455 LS Y R N+ + +I + +E Q+ Y+ +EQ RF K + +D E + +P Sbjct: 413 LQLSNYFRANLIGARETEITLGQERSQVDAYLELEQTRFPQKYNITFDQQVENDVYLPPF 472 Query: 456 LIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN---E 512 IQ LVENA+ H K V I++ + G R+ I V D G GI P+++ ++ Sbjct: 473 TIQVLVENALKHAFGARKDHNNVQITIKQLGARLAIQVADNGEGIAPELLPKLGKEPLTS 532 Query: 513 MPGNKIGLLNVHHRVKLLYGE--GLHIRRLEPGTEIAFYIPNQRTPVASQATL 563 G+ L N++ R+ LY E L I GT+I +P A +L Sbjct: 533 SKGSGNALYNLNQRLIGLYDERSALQITSSNKGTKIKISLPYHTKEGADNESL 585 >UniRef50_Q7P590 Autolysin sensor kinase n=10 Tax=Fusobacterium RepID=Q7P590_FUSNV Length = 558 Score = 490 bits (1261), Expect = e-137, Method: Composition-based stats. Identities = 218/550 (39%), Positives = 335/550 (60%), Gaps = 15/550 (2%) Query: 10 AVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPVEGS 69 + I FF IRI ++ +A + K+++A++ FSL ++ T+ G+ G+ Sbjct: 8 HLISNIGCSAIIAFFFIRIDKANIIIKSNAKTKKDIIALSFFFSLLSISGTYIGLNFNGA 67 Query: 70 LVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISGWIN 129 ++N R + V++GGIL GP+V IITG++AGIHR +++G TAIPC I +I G ++ +++ Sbjct: 68 ILNTRNVGVIAGGILGGPYVAIITGLVAGIHRAFVNLGRETAIPCAIATITGGFLTAYVH 127 Query: 130 LKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMI-LGSVCIGFIV 188 I + G + E L+M L+++ L +IV+ +PM+ + S+ ++ Sbjct: 128 RFIKSKDKIFFGFFLACVVENLSMGLILIILKDKILAQNIVANFYVPMVFMNSIGSSVLI 187 Query: 189 LLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIHADAVAITN 248 LLV+ + + E A RQAKLAL+IANKTLP FR +E+L +VC+II +D+ A A ITN Sbjct: 188 LLVEDIIQKSELIAGRQAKLALEIANKTLPHFRE--TENLSEVCKIIAEDLGAKATVITN 245 Query: 249 TDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNN-------DEAHRTPEIHSML 301 ++A + D S TR+ + G+ ++ D +P I S + Sbjct: 246 KKEIIAGFSFDKDK-IKKADIKSNNTRKVLKTGETMLVIKEDDEIIEDFLDISPHIKSCI 304 Query: 302 VIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAEL 361 ++PL EK ++GTLKI++ A +IT + + +GLS +ISTQ+E+S+ E L + +EL Sbjct: 305 ILPLKEKNDISGTLKIFFDTAEKITDKNRYLMIGLSHLISTQMEISKVENLISLLKYSEL 364 Query: 362 RALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELY 421 +ALQS+INPHFLFN LN ++S IR NP+ AR++ +LS YLRYN++ +++ KEL Sbjct: 365 KALQSQINPHFLFNVLNTMTSLIRTNPEKAREVTIDLSNYLRYNLDNNVKS-VELIKELN 423 Query: 422 QIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTI 480 Q+ YI IE+ RFGDKL +IYD+DE + N IPSL+IQPLVEN+I HGI + G V I Sbjct: 424 QVNTYIKIEKVRFGDKLNIIYDVDESLYNFQIPSLIIQPLVENSIKHGILKKRDNGCVKI 483 Query: 481 SVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRRL 540 + + G + + + D G GI+ +I+ ++ IGL NVH R+KLLYGEGL+I++L Sbjct: 484 IIKKIGKDIEVIIEDDGIGIEQTIIDNLDKQIKEN--IGLKNVHQRLKLLYGEGLNIKKL 541 Query: 541 EPGTEIAFYI 550 E GT I F I Sbjct: 542 EQGTRIKFKI 551 >UniRef50_C3WH60 Autolysin sensor kinase n=4 Tax=Fusobacterium RepID=C3WH60_9FUSO Length = 559 Score = 487 bits (1254), Expect = e-136, Method: Composition-based stats. Identities = 223/551 (40%), Positives = 339/551 (61%), Gaps = 16/551 (2%) Query: 10 AVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPVEGS 69 + I FF I+I ++ A S K+++A++ FSL ++ T+ G+ G+ Sbjct: 8 HLISNIGCSAIIAFFFIKIDKANIIIKSKAKSKKDVIALSFFFSLLSISGTYIGLNFNGA 67 Query: 70 LVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISGWIN 129 ++N R + V++GG+L GP+V +TG+IAGIHR ++++G TAIPC I +I+ G ++ +++ Sbjct: 68 ILNTRNMGVVAGGLLGGPYVAALTGLIAGIHRAIVNLGRETAIPCAIATIIGGFLTAYVS 127 Query: 130 LKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMI-LGSVCIGFIV 188 R L + E L+M L+++ AL IV IPM+ + SV ++ Sbjct: 128 RFAKNKDRMFFAFLLAFVVENLSMALILLIQKDKALAQSIVKNFYIPMVFMNSVGAAVLI 187 Query: 189 LLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIHADAVAITN 248 LLV+ + + E A QAKLAL+IANKTLP FR N+E+L +VC+II + + A A IT+ Sbjct: 188 LLVEDIIQKSELIAGSQAKLALEIANKTLPYFR--NTENLNEVCKIIANSLGARATVITD 245 Query: 249 TDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEA--------HRTPEIHSM 300 T ++A + + N + S TR+ + G++++ D+ + +P I S Sbjct: 246 TKEIIAGFSTDK-SVINRSNIRSNNTREVLKTGEVMLVIKDDEDEIIEDFFYISPHIKSC 304 Query: 301 LVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAE 360 +++PL EK V+GTLKI++ A +IT + + +GLS +ISTQ+E+S+ E L + +E Sbjct: 305 IILPLKEKNDVSGTLKIFFDTAEKITEKNRYLMIGLSHLISTQMEISKVENLISLLKYSE 364 Query: 361 LRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKEL 420 L+ALQS+INPHFLFN LN ++S IR NP+ AR++ +LS YLRYN++ +++ KEL Sbjct: 365 LKALQSQINPHFLFNVLNTMTSLIRTNPEKAREVTIDLSNYLRYNLDNNLKS-VELIKEL 423 Query: 421 YQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVT 479 QI YI IE+ARFG+KL +IYD+DE + N IPSL+IQPLVEN+I HGI + KG V Sbjct: 424 NQIDTYIKIEKARFGEKLNIIYDVDESLYNFQIPSLIIQPLVENSIKHGILKKRDKGFVK 483 Query: 480 ISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRR 539 I V + + +A+ D G GI+ VI+ ++ IGL NVH R+KLLYGEGL+I + Sbjct: 484 IIVKKIDKDIEVAIEDDGVGIEQAVIDNLDKKIEEN--IGLKNVHQRLKLLYGEGLNITK 541 Query: 540 LEPGTEIAFYI 550 LE GT I F I Sbjct: 542 LEQGTRIKFKI 552 >UniRef50_B1IFE5 Sensor histidine kinase n=13 Tax=Clostridium RepID=B1IFE5_CLOBK Length = 544 Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats. Identities = 164/555 (29%), Positives = 292/555 (52%), Gaps = 22/555 (3%) Query: 7 MLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPV 66 + + + + +L+ I + + + F + + + L + FS+ ++ T++GV + Sbjct: 2 IYIQLLESMSLIGIAAYLYSQTKTFNKFIKNKSDYKY-KLIIITFFSVLSILGTYTGVNI 60 Query: 67 EG-SLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCIS 125 E +L N R I + G + GP VGI+ G+I G HRY +GG TA+ C I++IL G + Sbjct: 61 EPYALANARPIGAIVAGYIGGPLVGIMVGIIGGTHRYF--LGGFTALSCAISTILEGIVG 118 Query: 126 GWINLKIP-KAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL-GSVC 183 G N+ + G+ ++ E L MI++++ A +++ I +PMI+ S+ Sbjct: 119 GIANVITKDEGLDVSTGVTAAIIAEVLQMIIILLIAKPYEAALELERVIALPMIITNSIG 178 Query: 184 IGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDDIHAD 242 +G + ++ + + + A Q++ AL+IA KT R N E L KVC II + I+ Sbjct: 179 VGIFINIINNTQEHYKKIGAIQSQKALNIAKKTSIYLRSGFNQEILDKVCSIIYESINLK 238 Query: 243 AVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSMLV 302 ++ I + +Y G E + + +Y I ++N++ + Sbjct: 239 SIFIAENGGIFSYNG--EELNKEKLKYRVKEYFDFKDYKLIKFEDNNKQKLF-----YCI 291 Query: 303 IPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELR 362 +K + I I + A LS +++TQ+E+ +QL + +KAEL+ Sbjct: 292 PIYTDKNKFKFVIGIQVKSYKSIDKYFSDFAKELSALLATQIELYELDQLAQEVSKAELK 351 Query: 363 ALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQ 422 L+++I+PHFLFN LN I+S R +P AR+LI NLS Y R ++ +D++ I +K E+ Sbjct: 352 MLRNQIHPHFLFNTLNTIASFCRTDPIKARELILNLSNYFRQTLKRQDEKII-LKDEIEF 410 Query: 423 IKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTIS 481 ++ Y+AIE+ARFG++L + +I EE ++ +P ++QP++EN++ HGI G V I+ Sbjct: 411 LESYLAIEKARFGERLNIDINIPEELLDAKVPVFVLQPIIENSMKHGILIKPQGGEVIIT 470 Query: 482 VAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---R 538 + ++++ ++DTG G+D + V + IGL NV+ R+KLLYGE I Sbjct: 471 AIDEKDKIKFVIKDTGVGMDKNTLSYVVESWP---GIGLSNVNKRLKLLYGEKSFICIES 527 Query: 539 RLEPGTEIAFYIPNQ 553 +L GT++ F IP + Sbjct: 528 KLNEGTKVMFCIPKE 542 >UniRef50_Q3DHF4 Sensor histidine kinase n=10 Tax=Streptococcus agalactiae RepID=Q3DHF4_STRAG Length = 579 Score = 475 bits (1224), Expect = e-132, Method: Composition-based stats. Identities = 164/579 (28%), Positives = 296/579 (51%), Gaps = 35/579 (6%) Query: 7 MLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPV 66 + L + +RA L+++ + + I ++ L K K + +FSLFA+ S ++GV + Sbjct: 3 LFLIMMERAGLIILLAYAFVHIPFIKQTL-KQPELKKHQYILLILFSLFAIISNFTGVEI 61 Query: 67 EG----------------SLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVT 110 + S+ N R++ + G++ GP VGII G+++ RYL GG+ Sbjct: 62 QSDLSIIPQTLNHIADQSSVANTRVLTIGVSGLIGGPIVGIIVGLLSVFVRYLQ--GGLA 119 Query: 111 AIPCFITSILAGCISGWINLKIPK---AQRWRVGILGGMLCETLTMILVIVWAPTTALGI 167 I+S+L G SG + + R ++ G E L MI +++++ + Sbjct: 120 PHIYVISSLLIGLCSGLSGNYLRRNYNKIRVLDAMVVGFGMEILQMICILIFSVDFNQAL 179 Query: 168 DIVSKIGIPMIL-GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNS 225 +VS I +PMIL ++ +G + ++ S + +E + A Q L++AN TLP R + + Sbjct: 180 RLVSFISMPMILSNTLGLGIFISIISSTQKLEEHAKAFQTHQVLELANLTLPYLRKGLTT 239 Query: 226 ESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIII 285 ES + V EII + AV++T+ +LAYVG G ++ ++ ++A++ GK+ + Sbjct: 240 ESCQPVAEIIHKHMDVSAVSLTSQSAILAYVGDGADHHLPNTQILTKLAKRAIDTGKVSV 299 Query: 286 KNNDEA----HRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIIS 341 + H+ + S +VIPL V+ GTLK+Y+ A +T +++A GL I S Sbjct: 300 ATDKSEIECDHKNCPLSSAIVIPLHIHDVIVGTLKLYFSDAQHMTYVDRQLAEGLGNIFS 359 Query: 342 TQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRY 401 TQL + +AE+ + AE+++LQ+++NPHFLFNALN I IR++ + AR+L+ + S+ Sbjct: 360 TQLALGQAEEATRLLQDAEMKSLQAQVNPHFLFNALNTIYGLIRMDSEKARKLVQDFSKV 419 Query: 402 LRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD--IDEEVNCCIPSLLIQP 459 +R N++ I + EL Q+ Y+A+E+ARF + + D + + N IP +Q Sbjct: 420 IRANLQRAKQNLIPLHDELEQVNAYLALEEARFPNMVAFNLDNQTNSDDNLMIPPFTLQV 479 Query: 460 LVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN---EMPGN 516 L+EN+ H + + +++A +R+ I V+D G GI + + + G+ Sbjct: 480 LIENSYKHAFKHVNKNNQLKVTIARNNDRLHIIVQDNGIGIPKEKLITLGKKTQISKQGS 539 Query: 517 KIGLLNVHHRVKLLYG--EGLHIRRLEPGTEIAFYIPNQ 553 + N+ R+ ++Y L + GT IP + Sbjct: 540 GTAIENLVRRLNIIYDGQASLKFESNDSGTCAIVNIPIK 578 >UniRef50_C0ZBJ5 Two-component sensor histidine kinase n=2 Tax=Bacillales RepID=C0ZBJ5_BREBN Length = 583 Score = 474 bits (1221), Expect = e-132, Method: Composition-based stats. Identities = 174/583 (29%), Positives = 293/583 (50%), Gaps = 34/583 (5%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 + N+ L + +R ++L F L R LFR+LL + H +A + +F LF + T++G Sbjct: 1 MDNLTLLLIERMGILLTLAFILTRTSLFRQLLDRELHVGTS-IAFSVMFGLFGIAGTYAG 59 Query: 64 VPVEGS----------------LVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIG 107 V V+G + ++ V+ GG+L GP VG+ GVIAG+H + +G Sbjct: 60 VVVQGESYHPAFWIFRLSHDEIIATSTLVGVVIGGLLGGPLVGLGAGVIAGLHVF--QLG 117 Query: 108 GVTAIPCFITSILAGCISGWINLKI--PKAQRWRVGILGGMLCETLTMILVIVWAPTTAL 165 G A P ++ + G ++G++ + + GM + M L+++ A L Sbjct: 118 GFAAAPMGLSIPITGLLAGYVARFFSQERVISPSKAMFIGMFAPIIQMSLLLIMAAPPEL 177 Query: 166 GIDIVSKIGIPMIL-GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLF-RHV 223 +V+ IGIPM+L SV I +++ E E SAA +A+ + IA + LP R + Sbjct: 178 ARTMVNVIGIPMVLTNSVSIAIFTTMIRVALQEAERSAAIEAERSFTIAERILPHLKRGL 237 Query: 224 NSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKI 283 ++ + +++ + A AVA+TN + +LA+VGVG ++ G+ S ++A+ G I Sbjct: 238 TPQTAQSAALVLQKETKAAAVAVTNRERLLAHVGVGADHHHPGEALHSELDKRALFSGGI 297 Query: 284 IIKNNDE----AHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQI 339 E + +H+ +++P+ E V G +K+YY QI + +A GL + Sbjct: 298 DKGLTRETVGCKRKNCSLHAAILVPIKEGDSVVGLIKLYYRRPQQIGKVQEALAKGLGNL 357 Query: 340 ISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLS 399 IS QL +S EQ++ + AELR LQ++I PHFLFN LN+I + IR++P AR + L Sbjct: 358 ISNQLTLSLTEQMKGLMKDAELRMLQAQIQPHFLFNTLNSIVTLIRIDPQLARHMTIQLG 417 Query: 400 RYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQ 458 ++R+N++L + +++EL + Y+ I + RF ++ V I+ V IP +Q Sbjct: 418 VFMRFNLKLTASPLVTVRQELDHLHAYLEIIKIRFSEQFAVRTIIEAGVEEALIPPGTLQ 477 Query: 459 PLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPK---VIERVEANEMPG 515 PL EN I HG++ G + + V V + D G G V+ +V G Sbjct: 478 PLFENCIQHGVRDITNGGEIILHVKRQDVHVAFQIEDNGQGFPDNLLPVLGKVPMESKEG 537 Query: 516 NKIGLLNVHHRVKLLYGEGLHIR---RLEPGTEIAFYIPNQRT 555 N IG+ NV+ R+ L G+ + + E G+ I F IP + Sbjct: 538 NGIGIHNVNQRLISLCGQEAQLHFANKQEGGSMITFTIPITKE 580 >UniRef50_B4UL02 Signal transduction histidine kinase, LytS n=9 Tax=Proteobacteria RepID=B4UL02_ANASK Length = 560 Score = 473 bits (1218), Expect = e-132, Method: Composition-based stats. Identities = 155/571 (27%), Positives = 277/571 (48%), Gaps = 31/571 (5%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 + +LL +F+ A+ + R FR P+ L++ F+ A+ T+ G Sbjct: 2 MGRLLLTLFEAMAVFFVLFHLYSRSPAFRPA-RTDWLRPRAKLSLLLFFTGIAILGTYLG 60 Query: 64 VPVEG-SLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAG 122 +P+ G ++ N R + + GG+L GP VG+ G+++G HR + +GG TA I + L G Sbjct: 61 LPLAGGAIANTRAVGAVLGGMLGGPAVGVAVGLLSGAHR--LTLGGFTAGAGAIATTLEG 118 Query: 123 CISGWINLKI-----PKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPM 177 + G ++ ++ + W++ E L M L++ + + +V IG+PM Sbjct: 119 LMGGLVHRRLASAAPDRLISWKLAFAVTAAGEALHMGLLLAVSRPFHESVRVVEGIGVPM 178 Query: 178 IL-GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTL-PLFRHVNSESLRKVCEII 235 IL SV + L++ + AA + AL IA +TL PL R + ++ II Sbjct: 179 ILANSVGAALFMTLLRDRHERYDRLAAATSAKALRIAERTLGPLARGFDRSVAGELASII 238 Query: 236 RDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAH--- 292 +++ AVAIT+T+ VLA+VG G +++ G SP TR A+ +++ + + H Sbjct: 239 QEETGVGAVAITDTETVLAFVGRGSDHHRPGLPIASPLTRGAIERHEVVFADGEHEHYRC 298 Query: 293 ---RTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRA 349 + S +VIPL G GT+++ + + + G++ ++S QL +R Sbjct: 299 AVSAACPLDSAVVIPLVVDGAAIGTVQLLETARTRFRRLNRSLGEGIADLLSDQLLRARF 358 Query: 350 EQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELK 409 + + + EL+ LQ++++PHFLFNALN + + R +P+ AR+L+ +LS R N++ + Sbjct: 359 HEQKSLLVLTELKLLQAQVDPHFLFNALNTVHAVTRTDPERARELLGHLSALFRKNLK-R 417 Query: 410 DDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHG 468 +++EL Y+ IE+ARFGD+L V+ ++D + +P+ +QPL+ENA+ HG Sbjct: 418 SAPLSTLEEELEHAGAYLEIEKARFGDRLAVLTEVDPALLRLRLPTFTLQPLIENAVKHG 477 Query: 469 IQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVK 528 + G+ I G I + D A + +G+ V R+K Sbjct: 478 LGATLGQATARIRAYRQGATAVIEIEDD---------AGAYAPRAGADGMGMSLVDRRIK 528 Query: 529 LLYGEGLHIR---RLEPGTEIAFYIPNQRTP 556 L G + T ++ +P + P Sbjct: 529 NLLGAEWGVTVSCTPSALTRVSVRVPFEERP 559 >UniRef50_P0AD15 Inner membrane protein yehU n=287 Tax=root RepID=YEHU_ECOL6 Length = 561 Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 148/570 (25%), Positives = 279/570 (48%), Gaps = 32/570 (5%) Query: 5 FNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGV 64 FN++L + + + L+ + + + LF L+ + P + L +FS+F + TW G+ Sbjct: 4 FNLVLLLLQQMCVFLVIAWLMSKTPLFIPLMQVTVRLPHKFLCY-IVFSIFCIMGTWFGL 62 Query: 65 PVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCI 124 ++ S+ N R I + GG+L GP VG + G+ G+HRY +GG+TA+ C I++I+ G + Sbjct: 63 HIDDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRY--SMGGMTALSCMISTIVEGLL 120 Query: 125 SGWINL------KIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMI 178 G ++ + K + E + M++++ A + +VS I PM+ Sbjct: 121 GGLVHSILIRRGRTDKVFNPITAGAVTFVAEMVQMLIILAIARPYEDAVRLVSNIAAPMM 180 Query: 179 L-GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIR 236 + +V + ++ E + + AL +A T + R N + KV +++ Sbjct: 181 VTNTVGAALFMRILLDKRAMFEKYTSAFSATALKVAASTEGILRQGFNEVNSMKVAQVLY 240 Query: 237 DDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEA----- 291 ++ AVAIT+ + +LA+ G+G+ ++ G S T +A+ G+++ + +E Sbjct: 241 QELDIGAVAITDREKLLAFTGIGDDHHLPGKPISSTYTLKAIETGEVVYADGNEVPYRCS 300 Query: 292 -HRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQE-MAVGLSQIISTQLEVSRA 349 H ++ S LVIPL + Y +++ SS+ + G++Q++S Q+ + Sbjct: 301 LHPQCKLGSTLVIPLRGENQRVMGTIKLYEAKNRLFSSINRTLGEGIAQLLSAQILAGQY 360 Query: 350 EQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELK 409 E+ + M ++E++ L +++NPHFLFNALN I + IR + + A QL+ LS + R N++ + Sbjct: 361 ERQKAMLTQSEIKLLHAQVNPHFLFNALNTIKAVIRRDSEQASQLVQYLSTFFRKNLK-R 419 Query: 410 DDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHG 468 E + + E+ + Y+ IE+ARF +L V I +E+ +P+ +QP+VENAI HG Sbjct: 420 PSEFVTLADEIEHVNAYLQIEKARFQSRLQVNIAIPQELSQQQLPAFTLQPIVENAIKHG 479 Query: 469 IQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVK 528 G V IS G + + + D + + +G+ V R++ Sbjct: 480 TSQLLDTGRVAISARREGQHLMLEIEDN---------AGLYQPVTNASGLGMNLVDKRLR 530 Query: 529 LLYGEGLHIR---RLEPGTEIAFYIPNQRT 555 +G+ I + T I +P + Sbjct: 531 ERFGDDYGISVACEPDSYTRITLRLPWRDE 560 >UniRef50_Q8E7H4 Sensor protein lytS n=10 Tax=Streptococcus RepID=LYTS_STRA3 Length = 581 Score = 466 bits (1199), Expect = e-129, Method: Composition-based stats. Identities = 165/588 (28%), Positives = 300/588 (51%), Gaps = 41/588 (6%) Query: 7 MLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPV 66 +++ +F R +++I F L+ FR+L+ S +E + + IF LF + S +G+ + Sbjct: 2 LMVLLFQRLGIIMILAFLLVNNSYFRQLI--EERSKRETVVLVIIFGLFVIISNITGIEI 59 Query: 67 EG-----------------SLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGV 109 +G SL N R + + + ++ GP VG I G I G+HR+ G Sbjct: 60 KGDRSLVERPFLTTISHSDSLANTRTLVITTASLVGGPLVGSIVGFIGGVHRFFQ--GSF 117 Query: 110 TAIPCFITSILAGCISGWINLKIPKAQRWRVG---ILGGMLCETLTMILVIVWAPTTALG 166 + ++S+L G +SG I K+ + + IL ++ E++ M+ V ++ G Sbjct: 118 SGSFYIVSSVLVGIVSGKIGDKLKENHLYPSTSQVILISIIAESIQMLFVGIFT-----G 172 Query: 167 IDIVSKIGIPM-ILGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVN 224 ++V I IPM IL S+ + ++++ + A Q + L++ +TLP R + Sbjct: 173 WELVKMIVIPMMILNSLGSTLFLAILKTYLSNESQLRAVQTRDVLELTRQTLPYLRQGLT 232 Query: 225 SESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKII 284 +S R VCEII+ + DAV +T+ +VLA++GVG ++ G + ++ + G+ Sbjct: 233 PQSARSVCEIIKRHTNFDAVGLTDRSNVLAHIGVGHDHHIAGQPVKTDLSKSVIFDGEPR 292 Query: 285 IKNND----EAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQII 340 I + +++S +V+PL G LK+Y+ ++ + + +GL+QI Sbjct: 293 IAQDKAAISCPDHNCQLNSAIVVPLKINDKTVGALKMYFAGDKTMSEVEENLVLGLAQIF 352 Query: 341 STQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSR 400 S QL + E+ ++A+ AE++ALQ++INPHF FNA+N IS+ IR++ D AR + LS Sbjct: 353 SGQLAMGITEEQNKLASMAEIKALQAQINPHFFFNAINTISALIRIDSDKARYALMQLST 412 Query: 401 YLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPL 460 + R +++ D ++ +++E + Y+ +E+ RF DK + YDI +P +Q L Sbjct: 413 FFRTSLQGGQDREVTLEQEKSHVDAYMNVEKLRFPDKYQLSYDISAPEKMKLPPFGLQVL 472 Query: 461 VENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN---EMPGNK 517 VENA+ H + K + + + G+ ++V D G GI +I+++ E G Sbjct: 473 VENAVRHAFKERKTDNHILVQIKPDGHYYCVSVSDNGQGISDTIIDKLGQETVAESKGTG 532 Query: 518 IGLLNVHHRVKLLYG--EGLHIRRLEPGTEIAFYIPNQ-RTPVASQAT 562 L+N+++R+ LLYG LH + GT++ + IPN+ R Sbjct: 533 TALVNLNNRLNLLYGSVSCLHFSSDKNGTKVWYRIPNRIREDEHENFN 580 >UniRef50_Q8EQQ2 Sensor protein lytS n=1 Tax=Oceanobacillus iheyensis RepID=LYTS_OCEIH Length = 585 Score = 451 bits (1162), Expect = e-125, Method: Composition-based stats. Identities = 170/582 (29%), Positives = 316/582 (54%), Gaps = 35/582 (6%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 + + + +F R L+L+ F L RI FR LL K + K ++ + IF L ++ G Sbjct: 1 MIELTIVLFQRIGLLLLMAFILTRIPRFRSLLDKDI-TLKTVIYHSLIFGLISIIGAHVG 59 Query: 64 VPVEGS--LVNVRIIAVMSGGILFGPWVGII--------------TGVIAGIHRYLIDIG 107 V + G+ ++ II V +L G + ++ TG++AG+ Y+I +G Sbjct: 60 VVMIGNELIMQAWIINVAENEVLIGFSIVVVMIAGLLGGPFLGLGTGMVAGL--YIIFLG 117 Query: 108 GVTAIPCFITSILAGCISGWINLKI--PKAQRWRVGILGGMLCETLTMILVIVWAPTTAL 165 G + + + LAG ++GW + + G+ L M L+++ P + Sbjct: 118 GGGWVANSLINPLAGLLTGWAGQFFSDDRVMSPNKALFIGIFPPVLHMGLLLIMLPDQQI 177 Query: 166 GIDIVSKIGIPMIL-GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLF-RHV 223 G+ IV+ IGIP+++ S+ + ++++ E E AA + AL IA K LPL Sbjct: 178 GVQIVNTIGIPLVVTNSIALTIFTMMIRLALNETEQEAALETNRALTIAEKALPLLSEEP 237 Query: 224 NSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKI 283 + + RK+ +++ ++ A++ITN VL++VG+G+ ++Q G+ +++A+ G+I Sbjct: 238 GTMNARKMAKLLFKELDIAAISITNRTTVLSHVGLGDDHHQPGEPLKMRLSKKAVKDGRI 297 Query: 284 IIKNNDEAHRT----PEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQI 339 I + + ++ + +++P++ G V G + +YY H+ QIT+ +A GL I Sbjct: 298 QIAYHQSDIQCGVENCKLKTAIMVPIYRSGEVIGLINLYYRHSQQITAVEITLAKGLGTI 357 Query: 340 ISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLS 399 IS Q+ AE+++++ +A++R LQ++INPHFLFN + I S +R++ + AR ++ LS Sbjct: 358 ISNQISGLEAEKMKKLLKEAKMRNLQAQINPHFLFNTFHLIHSLLRVDAEKARHILVQLS 417 Query: 400 RYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDE-EVNCCIPSLLIQ 458 +++R N+++ + + + KEL ++ Y+ I QARF D+++ +D+ ++ IP +Q Sbjct: 418 QFMRANLKIASESLVPLHKELEHLQAYLEIVQARFPDQISTSIHVDDYLLDIEIPPATLQ 477 Query: 459 PLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVI-----ERVEANEM 513 PLVEN+I HG+ KG++TI++ + N V I + D G G + K++ + + NE Sbjct: 478 PLVENSIQHGLSLSTSKGILTINITKTDNNVSIVLLDNGQGFEEKLLPILGKKPLHQNEN 537 Query: 514 PGNKIGLLNVHHRVKLLYGEG--LHIRRLEPGTEIAFYIPNQ 553 GN I L N++ R+ L GE LHI+ + G+ + F +P + Sbjct: 538 KGNGIALYNINQRLISLLGEDSQLHIQNTDKGSMVQFILPYR 579 >UniRef50_C5CI42 Signal transduction histidine kinase, LytS n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CI42_KOSOT Length = 559 Score = 450 bits (1158), Expect = e-125, Method: Composition-based stats. Identities = 157/557 (28%), Positives = 279/557 (50%), Gaps = 24/557 (4%) Query: 6 NMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVP 65 N+ + +R A++ + ++ + + L + P+ + + + + + T+ G+ Sbjct: 4 NIAFILIERVAIITMTIYIIFTFSFSQRHLIIRSK-PQSTIFIGILGGVLGIIGTFLGIE 62 Query: 66 VEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCIS 125 + ++ N R + V+ ++ GP G I+G+IAG+HR + +GGVT I C + +I+ G ++ Sbjct: 63 YKTAITNYRDMGVIIAAVIGGPISGTISGLIAGLHR--MTLGGVTGISCSLATIMVGVLT 120 Query: 126 GWINLKI-PKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL-GSVC 183 G+ PK R + + + E L + V + + DIV+ + +PM+L S+ Sbjct: 121 GFSRKLFGPKLLRPQFVVPLTIGMEFLHLGFVYLVTFPKDIAADIVTTVLLPMVLGNSIG 180 Query: 184 IGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLF-RHVNSESLRKVCEIIRDDIHAD 242 + + L+ ++++ EKE + I T+ L + +N + R++CE I+ D Sbjct: 181 VLLLSLIFRNLQIEKENVTEETTQSMFKIVENTIGLIDKGLNETTARQICETIKKLTSFD 240 Query: 243 AVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNND----EAHRTPEIH 298 AVA+T + +L++VG GE ++ G+ ++ +TR + GK + + +H+ + Sbjct: 241 AVALTTREKILSHVGAGEDHHTPGNPNLTESTRLTIQKGKARLIKHRSGIGCSHKNCPLF 300 Query: 299 SMLVIPLW-EKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMAN 357 ++IP+ G GTLK+Y + I A GL QI+S +LE+S+ + Sbjct: 301 RGILIPIKFTNGETIGTLKLYKTKENDIEKYEITFAKGLGQILSLELELSKTSKEARDNA 360 Query: 358 KAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIK 417 +A R L +K +PHFLFN LNA++ R + + AR++I LS +RY + K + + Sbjct: 361 EARYRQLVAKTDPHFLFNILNALAYLTRHDSEKAREMILKLSEMMRYTLREK-RTFVPLD 419 Query: 418 KELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGV 477 EL +++Y+ + + RFG+ L + D + IP IQP+VEN+I HG+ P K K Sbjct: 420 DELSFVRNYLQLMKIRFGELLDFKMEKDLKEPFWIPPFTIQPIVENSIKHGMIPNK-KLF 478 Query: 478 VTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI 537 V ISV V I + DTG GI+ + IGL + R+ LYGE H+ Sbjct: 479 VRISVKVKSRNVEILIFDTGKGIENE--------NKLQTGIGLKLIRERLSNLYGEKAHL 530 Query: 538 ---RRLEPGTEIAFYIP 551 + GT I IP Sbjct: 531 EVNSKPMKGTTITIRIP 547 >UniRef50_B0G7P0 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0G7P0_9FIRM Length = 583 Score = 447 bits (1151), Expect = e-124, Method: Composition-based stats. Identities = 163/565 (28%), Positives = 280/565 (49%), Gaps = 22/565 (3%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 I +++ A+ AL+ I L RI+ ++L+ + K L ++ IF+ + ST G Sbjct: 16 IKDIVYALIVNIALLAIIANLLSRIQTVQKLILQEKRGLKGDLILSMIFAGLIILSTCIG 75 Query: 64 VPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGC 123 V + +N R+I MS G+L GP VG+ + I I+ + V A +IL G Sbjct: 76 VKITSYSLNTRVIGAMSAGLLGGPLVGLYSSAIGAIYVLIFSTPRVFARGSAFATILFGL 135 Query: 124 ISGWINLKIPKAQRWRVG--ILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL-G 180 + + +W+ L E M ++ + + +D + +PMI+ Sbjct: 136 LGAGFYPYFQRG-KWKYTDLFLLACFAEICDMASLLRMTVSLEVAVDTIVDAALPMIIMN 194 Query: 181 SVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR--HVN-SESLRKVCEIIRD 237 ++ + + V ++ ++RQ + ++ K LPL + +N +E+++K+ +II Sbjct: 195 AIGMIVFISNFNGVFIFQDLESSRQIQKMSVLSQKCLPLLQDGGLNKAENMKKLSDIILK 254 Query: 238 DIHADAVAITNTDHVLAYVGVGEHNY------QNGDDFISPTTRQAMNYGKIIIKNNDEA 291 + + T+ + V+ + + + GD RQAM GK++ Sbjct: 255 ETQWSGILFTDREKVIQWQCKAKDEQAIFYQAKYGDPI-PEICRQAMEEGKLVKYEAQTG 313 Query: 292 ----HRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVS 347 T + +S+ +P K G+L ++ S E+ L + S+QL V Sbjct: 314 EKKWIHTAQDYSISSVPFRVKNQSVGSLTVWMKRQWMDRQSEIELLQHLMTLGSSQLAVL 373 Query: 348 RAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIE 407 EQ + + +AE +ALQ ++NPHFLFNALN IS R NP+ AR+L+ L+ Y RYN+ Sbjct: 374 ELEQQKNLLAQAEFKALQFQVNPHFLFNALNTISWVCRENPEEARELLLTLADYFRYNLN 433 Query: 408 LKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVH 467 + +++EL +KDY+ IE+ARF +KL V YD+ E++ +P+L++QPLVENA+ + Sbjct: 434 YDA-YMVPLREELEHVKDYLQIEKARFEEKLQVTYDVPEKMEILVPTLILQPLVENAVRY 492 Query: 468 GIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRV 527 GI G V I + E + R+ + D G G +V+E++ +E G+ IGL NVH R+ Sbjct: 493 GI-DRTGCRYVYIGITEEADAYRVEISDHGKGFPEEVLEKIAKDEPVGSSIGLQNVHKRM 551 Query: 528 KLLYGE--GLHIRRLEPGTEIAFYI 550 K +YGE GL I+ G+ + Y Sbjct: 552 KSVYGEERGLQIQSTPKGSTVKLYF 576 >UniRef50_B7IG85 Regulator of cell autolysis n=1 Tax=Thermosipho africanus TCF52B RepID=B7IG85_THEAB Length = 554 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 152/556 (27%), Positives = 271/556 (48%), Gaps = 27/556 (4%) Query: 6 NMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVP 65 N+ L + +R +L+L+ + + + + K L + I + T G+ Sbjct: 4 NISLILLERVSLILVITYITFQSYFIKNIF-GKTLVAKNRLVLGIIGGFLGILGTVFGIR 62 Query: 66 VEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCIS 125 G++VN R I V+ G+L G G+I +I+ I R +GG+T IPCF+ +I AG IS Sbjct: 63 YNGAIVNYRDIGVIFAGMLGGIPAGLIAALISSIFRLF--LGGITVIPCFLGTITAGIIS 120 Query: 126 GWI-NLKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL-GSVC 183 G+I +L K + +L +L E + + V+V +L DI KI PM++ S+ Sbjct: 121 GFISHLYGRKHFTFVRTLLYTVLIEIVHLTYVLVMVKPYSLAFDITFKILFPMVITNSLG 180 Query: 184 IGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDDIHAD 242 + F+ +++++E + E +A I K+L N + + + E I ++ + D Sbjct: 181 VSFLNYMIKNIEEQLEQTAENTINSIFVIMEKSLSSIEEGFNETNAKLIAETILNNTNFD 240 Query: 243 AVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRT----PEIH 298 AVAIT+ + +L +VG+G ++ G + + T++ + G + + ++ Sbjct: 241 AVAITDKNKILTHVGIGSDHHVTGMNIQTNATKKVIESGHGLKVVGKKGISCSAYNCPLY 300 Query: 299 SMLVIPLWE-KGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMAN 357 S ++IPL + + GTLK+YY +I +S L+Q +S + ++R + ++A Sbjct: 301 SGIIIPLTDLNNELIGTLKLYYSKKGEIKNSDIIFGKKLAQTLSLIISLARVNESLKLAT 360 Query: 358 KAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIK 417 + +LR L S ++PHFLFN LNAI + PD I N+S LRY + + + +K Sbjct: 361 EEKLRELMSNLSPHFLFNTLNAIKYISKKEPDKVNYFIDNISELLRYTLYEN-KKFVSLK 419 Query: 418 KELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGV 477 E+ +Y+ + + R+ DKL+ ++ E IP ++QPLVEN+I HG+ + + + Sbjct: 420 DEIKFTTNYLELMKLRYKDKLSYEITVNVENTIKIPPFILQPLVENSIKHGM--KEDELI 477 Query: 478 VTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI 537 + ++V N V+I+V D G G GL + R+K +YGE + Sbjct: 478 IKVNVESIDNYVKISVEDNGKGF----------KSSNKKGKGLELIQKRLKSIYGEDYNF 527 Query: 538 RRLE---PGTEIAFYI 550 GT + I Sbjct: 528 SIKNGIFGGTTVEIKI 543 >UniRef50_A6LJ91 Signal transduction histidine kinase, LytS n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LJ91_THEM4 Length = 552 Score = 436 bits (1123), Expect = e-121, Method: Composition-based stats. Identities = 144/557 (25%), Positives = 270/557 (48%), Gaps = 28/557 (5%) Query: 6 NMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVP 65 N+ L + +R +L+L+ + + + + + +S + K + + I + T G+ Sbjct: 4 NISLILLERVSLILVITYIIFQTYFIKNIFGRSLVT-KNKMVIGFIGGFLGILGTLFGIR 62 Query: 66 VEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCIS 125 G++VN R I V+ G+L G GI+ I+ R +GG+TA+PCF+ ++ AG IS Sbjct: 63 YNGAIVNYRDIGVILSGMLAGVSGGIVAAFISASFRLF--LGGITAVPCFLGTLTAGIIS 120 Query: 126 GWINLKI-PKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL-GSVC 183 G ++ K + + +L E + ++ V++ L DI KI PM++ ++ Sbjct: 121 GVLSEYYGRKHFTFFRTMYYTILIEIIHLMYVLLMVKPFYLAYDITFKILFPMVITNTLG 180 Query: 184 IGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDDIHAD 242 + F+ ++ ++E + + I + L N S + ++I ++ D Sbjct: 181 VSFLNFMMWNLEEKLQNVEENTISSIFVIMERILNTIEIGFNENSAILIAQVILENTDFD 240 Query: 243 AVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRT----PEIH 298 AVA+T+ +++LA+VG+G+ ++ +G+ + T++ +N G + + + Sbjct: 241 AVALTDKEYILAHVGIGDDHHISGEKIKTQATKKVINSGYGLKVVGKKGINCEKENCPLF 300 Query: 299 SMLVIP-LWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMAN 357 S +VIP G + GTLK+YY +H + + L+Q++S + +S + ++A Sbjct: 301 SAIVIPLNNINGDLIGTLKLYYSKSHSMQNKDIIFGKKLAQVLSLIISISEINESLKLAT 360 Query: 358 KAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIK 417 + ++R L S ++PHFLFN LNAI R P + I NLS LRY + + ++ Sbjct: 361 EEKMRELMSNMSPHFLFNTLNAIKYISRREPQRVDKFIDNLSSLLRYTLYENSK-LVSVR 419 Query: 418 KELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKG 476 E+ K+Y+ + + RF DKL + +E+ IP ++QPLVEN+I HG+ GK Sbjct: 420 NEVDFTKNYLELMKLRFEDKLNYEVKVAKELEEYLIPPFILQPLVENSIKHGM--KGGKL 477 Query: 477 VVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLH 536 ++ IS+++ +++I V D G G M GLL + R+K+L+G+ Sbjct: 478 LIRISISKSDKKIKICVEDNGKGFSE----------MKKTGKGLLLIKKRLKVLFGDNYV 527 Query: 537 IRRLE---PGTEIAFYI 550 G + Sbjct: 528 FNIKNNFFGGVVVEIKF 544 >UniRef50_Q1QCQ6 Histidine kinase internal region n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1QCQ6_PSYCK Length = 582 Score = 434 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 167/586 (28%), Positives = 287/586 (48%), Gaps = 39/586 (6%) Query: 4 IFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSG 63 ++ +L + R ++++ + + R+ +FR+++ + L + IF +F + ++ Sbjct: 1 MWEILSQMLSRMSIIITIAYLITRLPIFRKMISQRV-GIGGLFVLIIIFGMFGVIGNYTA 59 Query: 64 VPV------------------EGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLID 105 + V ++ + R I ++ GG GP VGI VIAG HR L+ Sbjct: 60 LVVEPGNQKVISNIWNPTLQSNNAVADTRNIGIIIGGFFGGPIVGIGASVIAGAHRLLM- 118 Query: 106 IGGVTAIPCFITSILAGCISGWINLKIPK--AQRWRVGILGGMLCETLTMILVIVWAPTT 163 GG + F SIL GC +GW K + R L ++ T+ ++ + V Sbjct: 119 -GGFISGATFWVSILGGCFAGWFGYKWRGMGLIKPRYMFLTSIIILTIQILAIPVLTTDH 177 Query: 164 ALGIDIVSKIGIPMIL-GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR- 221 + +++ G P+I+ SV I ++ +V E++ + A Q IA++T LFR Sbjct: 178 TTALKLIAFTGPPIIIINSVGIWICAMIFYNVVVEEDRTRASQTVKTFSIADQTFSLFRS 237 Query: 222 HVNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYG 281 +N S +K +II+ + VAIT LAY G + +N ++ ++ + A++ G Sbjct: 238 GLNENSAKKSTKIIKKLTAVEHVAITRGIRELAYTGTLNNQKRNEEEDLASR-KLALSTG 296 Query: 282 KIIIKNNDEAHRTPEI---HSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQ 338 K ++ + + +V+P + GT+ YY + IT +E+ GL + Sbjct: 297 KSVLNEPKSKWLFSKKSNSRASVVVPFCVQNKTIGTITFYYASSLHITVVEKELIEGLGK 356 Query: 339 IISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNL 398 + S QLE+ E+ ++ A++ ALQS+I PHFLFNALN I + R++P AR L+ +L Sbjct: 357 LFSNQLELGEIERHNQLLQNAKIEALQSQIQPHFLFNALNTIVALCRIDPMLARDLLLHL 416 Query: 399 SRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLI 457 S YLR N+ D + + KE+ ++ Y+AIEQARF DK V ++ ++ C IP +I Sbjct: 417 STYLRNNLSGIADFLVPVYKEMENVQAYLAIEQARFPDKFVVNIEVAPDLIECLIPPFII 476 Query: 458 QPLVENAIVH-GIQPCKGKGVVTISVAECGNRVR-IAVRDTGHGIDPKVI----ERVEAN 511 QPLVENAI H G + + KG V I + + + I V D G G++ I ERV + Sbjct: 477 QPLVENAIKHGGFKKIEAKGAVHIEIKKISELLILIKVSDNGIGVELNRIVDLGERVVKS 536 Query: 512 EMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQR 554 G+ L N+ R+ LY + + + GT ++ +P + Sbjct: 537 SKDGSGTALFNIKERLTALYSQDVRFNIDSDVGKGTCVSIILPVKT 582 >UniRef50_A6F874 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=A6F874_9GAMM Length = 515 Score = 419 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 142/517 (27%), Positives = 262/517 (50%), Gaps = 31/517 (5%) Query: 54 LFALFSTWSGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIP 113 +F + ++ G+ ++VN R I + GG+ GP VG+ G+ GIHRY + GG T + Sbjct: 1 MFCMMGSYFGLQYGDAIVNTRAIGAVMGGLFGGPVVGLAVGMTGGIHRYFM--GGFTDLA 58 Query: 114 CFITSILAGCISGWINLKIPKAQRWRVGI------LGGMLCETLTMILVIVWAPTTALGI 167 C I++ + G I G +++ + + + L + E M +++V A Sbjct: 59 CAISTSVEGLIGGLLHVYLLRKNKIHYIFKPHIIFLVTLFAELTQMAILLVVAKPYEQAY 118 Query: 168 DIVSKIGIPMI-LGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLF-RHVNS 225 +VS +PMI ++ + +++ + E + ++ AL IA++++ + + +N Sbjct: 119 ALVSVAALPMITANTIGAVLFMSIIEDRKSIFEKYSTAFSQRALRIADRSVGILSQGLNP 178 Query: 226 ESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIII 285 ES + + II ++ + A+AIT+T+++LA++G+GE ++ S +QA++ +II Sbjct: 179 ESAKTIANIIYEETNVGAIAITDTNNILAFIGIGEQHHHVNVPI-SSYIQQAIDENRIID 237 Query: 286 KN------NDEAHRTPEIHSMLVIPLWEK-GVVTGTLKIYYCHAHQITSSLQEMAVGLSQ 338 N + S ++PL V GT+K+Y +++ MA G++Q Sbjct: 238 LNSTTNTYQCSIDDKCRLGSAFILPLRNGDNKVVGTIKLYEPRRKLLSNINISMAEGIAQ 297 Query: 339 IISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNL 398 ++S+Q+ + +Q + + +AEL+ L +++NPHFLFNAL IS+ R PD AR LI +L Sbjct: 298 LLSSQILLGHYQQQQTLLTQAELKLLHAQVNPHFLFNALTTISAVTRREPDKARMLIQHL 357 Query: 399 SRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLI 457 +++ R N++ + + +++EL + Y+ IEQAR ++L+V +I E+ + +PS + Sbjct: 358 AQFFRKNLKQNIES-VSLREELSHVNAYLTIEQARLTNRLSVSINIAPELMDIKLPSFTL 416 Query: 458 QPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNK 517 QPL+ENAI HGI G + I RI V D ++ Sbjct: 417 QPLIENAIKHGISTMLSAGKLEIYSQITPEGPRIFVTDN--------AGTFVTSKEENTG 468 Query: 518 IGLLNVHHRVKLLYGE--GLHIRRL-EPGTEIAFYIP 551 +GL V R+ + E L I T+++F +P Sbjct: 469 LGLKIVDKRLINHFNEHSSLQISTTKNKLTQVSFLLP 505 >UniRef50_C9R972 Signal transduction histidine kinase, LytS n=1 Tax=Ammonifex degensii KC4 RepID=C9R972_AMMDK Length = 465 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 131/430 (30%), Positives = 226/430 (52%), Gaps = 20/430 (4%) Query: 146 MLCETLTMILVIVWAPTTALGIDIVSKIGIPMILGSVCIGFIVLLVQSVEGEKEASAARQ 205 +L E + + L ++ TAL + + ++L + E+ + A Sbjct: 29 LLAEVVGLELFLLVV-ATALWPQFWRATLFLALANGL---LFLILRRRGGEERISVRALD 84 Query: 206 AKL---ALDIANKTLPLFR-HVNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEH 261 ++ L IA++TLP R +N E+ K+ EII+ AVAIT+ + +LA++G G Sbjct: 85 SQALDPTLKIADETLPYLRRGLNPETAVKIAEIIQRIGDVPAVAITDRERILAFLGPGCD 144 Query: 262 NYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRT------PEIHSMLVIPLWEKGVVTGTL 315 + G ++ T++ + G+I + + + +++PL +G V GT+ Sbjct: 145 RHPPGGGIVTHATKRVIETGEIKVVERRADFECPVKDCVCPLGAAVIVPLKCRGEVVGTV 204 Query: 316 KIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFN 375 K+Y + +L +AVG++QI+ Q+E++ ++ ++ KA+L AL+++INPHFLFN Sbjct: 205 KLYRTEEGPLPRTLVNLAVGIAQILGIQMELAELDRQAQLVTKAQLDALRAQINPHFLFN 264 Query: 376 ALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFG 435 LN I R NPD AR+L+ L+ + R+ ++ +++E+ + Y+ +E+ARFG Sbjct: 265 TLNTIIMFSRTNPDRARRLLIRLASFFRHALKSTGH-FTTLREEMECVNTYLVLEKARFG 323 Query: 436 DKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVR 494 KL + ID+ + + +P L +QPLVENAI HGI P G G V ISV G +R+ V Sbjct: 324 QKLRFVRSIDKTLYDYLVPVLTLQPLVENAIKHGITPKLGPGTVRISVRRQGEEMRVEVA 383 Query: 495 DTGHGIDPKVIERVEA-NEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYI 550 D G GI P+++ ++ G+ +GL NVH R++ L+GEG + GT + F + Sbjct: 384 DDGVGIPPEIMPKILTPGSASGSGVGLYNVHERLRGLFGEGYGLEIKSEPGKGTTVRFRL 443 Query: 551 PNQRTPVASQ 560 P R + Sbjct: 444 PLLREVKEEE 453 >UniRef50_C9LQU0 Sensor protein LytS n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQU0_9FIRM Length = 565 Score = 410 bits (1054), Expect = e-113, Method: Composition-based stats. Identities = 152/562 (27%), Positives = 264/562 (46%), Gaps = 33/562 (5%) Query: 15 AALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPVEGSLVNVR 74 ++ L+ L L R ++FR L + ++ +E + T IF++ L T+ G ++ R Sbjct: 21 ISIFLLVLLLLSRTKIFRNALSQERYTKREYIIFTVIFTILGLCGTFWNFRTPGGIMTFR 80 Query: 75 IIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISGWINLKIPK 134 + +M G + GP VG ITG+I GI+R I + TA SIL G +G ++ +I K Sbjct: 81 AVPIMLSGFIGGPIVGTITGLIVGINRIFI-LQTATAPINGGLSILQGIAAGLLSPQIKK 139 Query: 135 --AQRWRVGILGGMLCETLTMIL--VIVWAPTTALGIDIVSKIGIPMILGSVCIGFIVLL 190 +QRW + + E + + ++ W D++S + ++ + + + + Sbjct: 140 HSSQRWMWALFYSIGIEIVYWLFYALLTWPYAYINTKDLLSLVVPIIVTNTPAVALFIGV 199 Query: 191 VQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSES----LRKVCEIIRDDI-HADAVA 245 +++ ++++ AK A + AN L + ++ E+ K II + H A Sbjct: 200 LEATTRQQDSEKTETAKTAFNSANM---LIQTIHDEAHGFDFSKTPRIITTALPHLIWSA 256 Query: 246 ITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSMLVIPL 305 I D+V NY+N P + + I+ P + + + Sbjct: 257 IITNDNVFI-----STNYKN------PRNQSQGDAETSILLLQKTLPSMPHLLQLRIEG- 304 Query: 306 WEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQ 365 K + ++ + +E G ++II E ++ + + +AE+RALQ Sbjct: 305 --KTKTICRIFASNPTDTPLSKTDKEFLNGTARIIELIHEHEELKKEKLLLQEAEIRALQ 362 Query: 366 SKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKD 425 ++INPHFL+N LN I+ +R +PD AR L+ LS Y R+ + + I + +E+Y I Sbjct: 363 AQINPHFLYNTLNTINFYVRSDPDIARNLLKYLSDYFRHTLN-NPSKMILLSEEIYDITC 421 Query: 426 YIAIEQARFGDKLTVIYDIDEEV--NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVA 483 Y+ +E+ARF D+L + Y I E IP LL+QPLVENAI+HGI G + + + Sbjct: 422 YVELERARFSDRLQIEYRIPLEKMKKIQIPPLLLQPLVENAIIHGILKKPEGGKIIVGLH 481 Query: 484 ECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLH---IRRL 540 E + +I V DTG GI + ++ + + IGL+NVH R+ ++GE I R Sbjct: 482 EHPHLYKIFVADTGVGIPQDKLGKLLTSHKRRDNIGLINVHQRLLSIFGEKSRLHIISRT 541 Query: 541 EPGTEIAFYIPNQRTPVASQAT 562 GT + IP + + T Sbjct: 542 GKGTVVYIIIPKEGEHDNTDNT 563 >UniRef50_B0TBI2 Sensor protein lyts n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TBI2_HELMI Length = 583 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 160/570 (28%), Positives = 281/570 (49%), Gaps = 51/570 (8%) Query: 35 LHKSAHSPKELLAVTAIFSLFALFSTWSGVPV----------------------EGSLVN 72 L + K + F L A+ T + + + ++V Sbjct: 20 LIQRPLVGKRKAHLILWFGLLAVAGTQASAVITAGSALSSAPVLSNVPLAPVQADQAVVT 79 Query: 73 VRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISGWINLKI 132 + ++V+ GG++ G VG+ G IAG+H L+ +GG+ A IT +L G ++GW+ Sbjct: 80 LAGMSVIGGGLVGGLPVGLAVGAIAGMH--LLTLGGMAAEINAITMVLTGLLTGWL---- 133 Query: 133 PKAQRWRVGILGGMLCETLTMILVIV--WAPTTALGID------IVSKIGIPMILGSVCI 184 QR +L G + + ++ A T L D + + I+ ++ Sbjct: 134 --VQRSGESLLSGRWAFVVAFFVTLLAGGALVTHLHPDDGPVRFLEGTVLPSAIVNALAA 191 Query: 185 GFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDDIHADA 243 + ++++V E E A + + AL ++ TL + +N+++ R + E+ ++ A Sbjct: 192 AVFMEMLRTVSREVEEV-ALETERALKLSEFTLSQLQQGLNADTGRAIAEVFMTELKTLA 250 Query: 244 VAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEI----HS 299 V IT+ VL +VG+GE Y G + + +A+ GK+ + E ++ + + Sbjct: 251 VTITDNKSVLVHVGIGEEEYPPGRLVHTKGSLKALETGKLQVVYRHEPYKHSYLDKILRA 310 Query: 300 MLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKA 359 +VIP G V G LK+Y+ + I +A GL ++IS QL + E+ + A Sbjct: 311 AIVIPFSCSGQVIGLLKLYFYRSQDIRPYEIGLAQGLGKLISYQLSLLETEKKSLLLKDA 370 Query: 360 ELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKE 419 ELR LQ++INPHFLFN+LNAI S IR NP AR+++ L+ ++R N+++ + + +++E Sbjct: 371 ELRMLQAQINPHFLFNSLNAIVSLIRTNPSLARKMMVQLADFMRMNLKMMEMPLVSLEEE 430 Query: 420 LYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVV 478 L ++ YI I Q RF D+LT+ +++ + N IP +QPLVEN+I HG++ G + Sbjct: 431 LRHLRAYIDIVQLRFADRLTIRLEVEPGLNNFRIPPSTLQPLVENSIQHGLKDISEGGSI 490 Query: 479 TISVAECGNRVRIAVRDTGHGIDPKVIERVEANE---MPGNKIGLLNVHHRVKLLYGEGL 535 +S+A GN V++ V D G GI ++ R+ + GN IG+ NV R+ L G Sbjct: 491 VLSIARDGNGVQVRVTDNGSGIPESLLNRIARQQLPSQKGNGIGVHNVSQRLTSLLGGES 550 Query: 536 HI---RRLEPGTEIAFYIPNQRTPVASQAT 562 + E G E+ F++P + V + + Sbjct: 551 QLVFSNLAEGGCEVRFFLPEPKEEVVNDES 580 >UniRef50_Q2RGH9 ATP-binding region, ATPase-like n=2 Tax=Clostridia RepID=Q2RGH9_MOOTA Length = 455 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 122/439 (27%), Positives = 215/439 (48%), Gaps = 16/439 (3%) Query: 137 RWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILGSVCIGFIVLLVQSVEG 196 R + + + ++ P + + V + L G L Q Sbjct: 3 RKVYLLFATLTISEVLTAVLFFRVPPFPVFLAFVVLNALGAGLAIYFQGLSCSLPQRPIE 62 Query: 197 EKEASAARQA-KLALDIANKTLPLFRH-VNSESLRKVCEIIRDDIHADAVAITNTDHVLA 254 E L IA++TLP+ R +N + K +II+D A+AIT+ + VL Sbjct: 63 EDANFNTDSIFVSTLQIADQTLPVLRGGLNKTTAAKTADIIQDLTQVPAIAITDRERVLT 122 Query: 255 YVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRT--------PEIHSMLVIPLW 306 ++GVG +Q GD ++ T++ + G++ + + + + S +++PL Sbjct: 123 FLGVGCDQHQAGDRILTEATKEVIATGRMKVVHTPQGLCCPRYGTGCNCPLKSAVIVPLK 182 Query: 307 EKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQS 366 + + G LK+Y + +AVGL+ ++S Q+E+S ++ R++ +A L AL + Sbjct: 183 CRDEIVGALKLYQTREGVFQPEIVRLAVGLANLLSLQIELSELDRQRQLLTEARLEALNA 242 Query: 367 KINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDY 426 +INPHF FN LN I S R +P+ AR+L+ L++ R + +++EL ++ Y Sbjct: 243 QINPHFFFNTLNTIISFSRTDPERARRLLIRLAKLFRQTLSRHG-SLTTLQEELDCVRTY 301 Query: 427 IAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAEC 485 + +E+ARFG+K + D+ E + IP L +QPLVENA+ HG+ +G+G V +S Sbjct: 302 LVLEKARFGNKFRYLEDVPPELLEYHIPVLSLQPLVENAVNHGLLAKEGRGTVKVSGRLA 361 Query: 486 GNRVRIAVRDTGHGIDPKVIERV-EANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLE 541 G+ + +AV+D G GI + I V + GN +GL NV+ R + LYGE + + Sbjct: 362 GHELHLAVKDDGVGIPAEKINLVTQPGYGSGNGVGLSNVNLRFQSLYGEDYGLRLMSEVG 421 Query: 542 PGTEIAFYIPNQRTPVASQ 560 GT + +P + + + Sbjct: 422 KGTTVILRVPLLKAAMVKE 440 >UniRef50_C8VX85 Signal transduction histidine kinase, LytS n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VX85_DESAS Length = 446 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 134/421 (31%), Positives = 223/421 (52%), Gaps = 13/421 (3%) Query: 146 MLCETLTMILVIVWAPTTALGIDI-VSKIGIPMILGSVCIGFIVLLVQSVEGEKEASAAR 204 +L + ++V + L + + + + + + S VL + + Sbjct: 11 LLNVIIRWLIVQLIGSVMVLALSLKLWQAVFILFIISGLSVSFVLYYWLNRRPVKLKSTD 70 Query: 205 QAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNY 263 Q + L IA++TLP R +N E+ EII+ DAVAIT+ + VLAY+G G ++ Sbjct: 71 Q-PIELQIASETLPFMRRGLNVETAGSTAEIIKKISDVDAVAITDREKVLAYIGEGSDHH 129 Query: 264 QNGDDFISPTTRQAMNYGKIIIKNNDEAHRT----PEIHSMLVIPLWEKGVVTGTLKIYY 319 + G + ++ TR+A+ G+I + +N + + +++PL G V GT+K+Y Sbjct: 130 KPGGEILTYATRRAIITGEIKVIHNSRDINCSVPHCPLEAAVIVPLRCNGEVVGTVKMYR 189 Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 ++ L ++AVG++Q++ Q+E++ ++ ++ AEL AL ++INPHFLFN LN Sbjct: 190 TKQGRMPDHLVKLAVGVAQMLDVQMELAELDRRAQLVAVAELDALHAQINPHFLFNTLNT 249 Query: 380 ISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLT 439 I R NP+TAR+L+ LS + R ++ K +K E+ I Y+ + +ARF +K+ Sbjct: 250 IIMFSRTNPETARRLLIRLSSFFRQALQRKGH-FNTLKGEIEYINTYLVLVRARFREKIR 308 Query: 440 VIYDID-EEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGH 498 V I E + +P L IQPLVENA+ HGI P +G G V+I+V + + I V D G Sbjct: 309 VRRQIAHELLEYRVPVLTIQPLVENAVKHGIMPKEGAGTVSITVKMQNDELLIVVEDDGV 368 Query: 499 GIDPKVIER-VEANEMPGNKIGLLNVHHRVKLLYGEGLH---IRRLEPGTEIAFYIPNQR 554 GI +I + ++ GN +GL NVH R+K L+GE I + GT + +P +R Sbjct: 369 GISLDMIPKVLQPGYGSGNGVGLSNVHERLKNLFGEEYGLRIISKPGEGTAVYVRVPIKR 428 Query: 555 T 555 Sbjct: 429 D 429 >UniRef50_Q67QS2 Two-component sensor histidine kinase n=1 Tax=Symbiobacterium thermophilum RepID=Q67QS2_SYMTH Length = 477 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 132/441 (29%), Positives = 220/441 (49%), Gaps = 31/441 (7%) Query: 133 PKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILGSVCIGFIVLLVQ 192 P R +L M+ ++ +VWA M +V + +VL Sbjct: 42 PVVNRRARALLLAMVGVGGAALVWLVWARPPRAE----------MWAAAVVVLQLVLAAW 91 Query: 193 SVEGEKEASAARQA--------KLALDIANKTLPLF-RHVNSESLRKVCEIIRDDIHADA 243 + + + + A +L I +T+P + +N ES +K+CEIIR DA Sbjct: 92 LLTRQDDEESISPAVLESITSFDTSLRIGEETMPYLKQGLNFESAQKICEIIRQITEMDA 151 Query: 244 VAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNN------DEAHRTPEI 297 VAIT+ +L + GVG ++ G ++ TR + G+ + N+ DE + Sbjct: 152 VAITDDKVILGFSGVGCRRHRQGGPILTGATRHVLETGEARVVNDPRVLSCDEPGCPHPL 211 Query: 298 HSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMAN 357 + ++ PL +G V GT K+Y + + + +A G++ ++ Q+E++ +E+ R++ Sbjct: 212 KAAVITPLKFRGKVVGTFKLYRASNAPVPTYVVRLAAGIAALLGIQMELAESERQRQLVV 271 Query: 358 KAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIK 417 +A L ALQ++I PHFLFN LN I R +P+ +R+L+ +L+++ R ++ + + + Sbjct: 272 RARLEALQAQIRPHFLFNVLNTIIMFSRTDPERSRELLVSLAQFFRRSLTTRGN-MNTFQ 330 Query: 418 KELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKG 476 EL I Y+++EQARFG+KL V +D V +P L +QPLVENA+VHG+ P + G Sbjct: 331 DELEYIHIYLSLEQARFGEKLRVKMKVDPRVTGAMVPVLTLQPLVENAVVHGLAPKEDTG 390 Query: 477 VVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGN-KIGLLNVHHRVKLLYGEGL 535 VV I + G+ + I + D G G+D + RV N +GL NV+ R+ LYG Sbjct: 391 VVGIRARQVGSHLHILIADNGVGMDRETQRRVFEEGYGNNMGLGLTNVNERLISLYGPQY 450 Query: 536 HI---RRLEPGTEIAFYIPNQ 553 + GT I IP Q Sbjct: 451 RLRIRSTPGRGTAIRLRIPLQ 471 >UniRef50_B8G277 Signal transduction histidine kinase, LytS n=2 Tax=Desulfitobacterium hafniense RepID=B8G277_DESHD Length = 426 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 129/422 (30%), Positives = 226/422 (53%), Gaps = 16/422 (3%) Query: 153 MILVIVWAPTTALGIDIVSKIGIPMILGSVCIGFIVLLVQSVEGEKEASAA--RQAKLAL 210 MI + L + +V+ +IL + F +L ++E +K A A R A+L+ Sbjct: 1 MIFESIVILGVELMLVLVTGQMNLLILFLIGNTFFLLYHLNLEYKKTARQATERNAELSF 60 Query: 211 DIANKTLPLFR-HVNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDF 269 IAN+TLP R +N ++ + +II++ AV+IT+ + LAY+GVG + GD Sbjct: 61 KIANQTLPYLRRGLNEQNAEYIAKIIQEIGQVAAVSITDCEKQLAYLGVGCDQHHPGDKI 120 Query: 270 ISPTTRQAMNYGKIIIKNNDEAHRT-------PEIHSMLVIPLWEKGVVTGTLKIYYCHA 322 ++ TR + G I + + + +++PL +G V GT+K+Y Sbjct: 121 LTRATRDVIQSGVYKIVRTQKELNCPRQNTCDCPLAAAVIVPLKCQGEVVGTMKLYETKV 180 Query: 323 HQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISS 382 Q++S L +A+G++ ++ Q+E++ + ++A +A+L ALQ++INPHF FN LN I + Sbjct: 181 GQLSSDLIRLAIGMADLLGIQIELAELDHQAKLAAEAQLNALQAQINPHFFFNVLNTIIA 240 Query: 383 SIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIY 442 + R +P+ +R+L+ +L+ + R ++ I +++E+ +K Y+ +E+ARFG KL Sbjct: 241 TSRTSPNRSRRLLIHLAEFFRKALKSHG-SLITLREEMSFVKTYLILEKARFGRKLHFKS 299 Query: 443 DIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGID 501 +I EE+ + +P L +QPLVENA+ HGI G GVV++ V + G + I V D G GI Sbjct: 300 EIPEELMDALVPRLSVQPLVENAVKHGITEKIGNGVVSVKVEQKGQELYITVADDGVGIQ 359 Query: 502 PKVIERVEA-NEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRTPV 557 P+ ++ V GN +G+ NVH R+ YG+ + + T + ++P Sbjct: 360 PERLQEVLKPGVGSGNGVGMANVHERLIGHYGKEYGLQIKSQPNISTTVTMHLPLTTMED 419 Query: 558 AS 559 Sbjct: 420 ED 421 >UniRef50_Q3AEC2 Sensor histidine kinase n=2 Tax=Clostridia RepID=Q3AEC2_CARHZ Length = 427 Score = 355 bits (911), Expect = 3e-96, Method: Composition-based stats. Identities = 130/380 (34%), Positives = 218/380 (57%), Gaps = 16/380 (4%) Query: 187 IVLLVQSVEGEKEASAARQAKLALDIANKTLPLF-RHVNSESLRKVCEIIRDDIHADAVA 245 + + +KE L +AN+ LP+ + +N E+ K+ EII+ +AVA Sbjct: 41 FFRTFRVITLKKEEQDQLN---PLMLANEALPIIKQGLNVETAGKIAEIIQRISDMEAVA 97 Query: 246 ITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRT------PEIHS 299 IT+ + VLAYVGVG ++ GD + T++A+ G++ I ++ + + + Sbjct: 98 ITDREKVLAYVGVGCERHKIGDPIRTFATKEAIRTGELKIIDHSLKYICSVKDCDCPLQA 157 Query: 300 MLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKA 359 +V+PL +G V GT+K+Y ++ + ++A+G++QI++ Q+E++ ++ +M KA Sbjct: 158 AVVVPLKIRGQVVGTIKLYQTKKGEMPAQTVKLAMGIAQILNLQMEIAELDRQAQMVTKA 217 Query: 360 ELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKE 419 +L ALQ+KINPHFLFN LN I R NP+ AR+L+ +L+++ R ++ + +K+E Sbjct: 218 QLEALQAKINPHFLFNTLNTIIMFNRTNPELARKLLIHLAKFFRQTLKKQGM-FGTLKEE 276 Query: 420 LYQIKDYIAIEQARFGDKLTVIYDID-EEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVV 478 L + Y+ +E+ARF KL +I DID E +N P L +QPLVENA+ HGI P + +G V Sbjct: 277 LDYVNTYLVLEKARFRQKLRIIRDIDRELLNYQFPVLTLQPLVENAVKHGITPKESQGTV 336 Query: 479 TISVAECGNRVRIAVRDTGHGIDPKVIERVEA-NEMPGNKIGLLNVHHRVKLLYGEGLHI 537 I + G ++ + ++D G GI P ++ RV GN +G+ NVH R+ LYG + Sbjct: 337 LIRIKRDGEKINVEIKDDGVGISPSMVGRVLEPGFGSGNGVGMSNVHERLLSLYGREAGL 396 Query: 538 ---RRLEPGTEIAFYIPNQR 554 +L GT ++F IP + Sbjct: 397 KIESKLGVGTTVSFSIPALK 416 >UniRef50_C8W8F7 Signal transduction histidine kinase, LytS n=3 Tax=Atopobium RepID=C8W8F7_ATOPD Length = 433 Score = 341 bits (875), Expect = 5e-92, Method: Composition-based stats. Identities = 112/412 (27%), Positives = 206/412 (50%), Gaps = 28/412 (6%) Query: 165 LGIDIVSKIGIPMILGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-V 223 L +V+ ++ + +++L + + E + +++ + L++A+KTL R + Sbjct: 14 LSWSVVTDNLFAALVAGGGLATVIVLGGTTQPGNEHTRSQETERTLEVASKTLKTLRGGL 73 Query: 224 NSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKI 283 + E+ +C ++ + A A++IT+T++VL + G + G + P T + + G++ Sbjct: 74 SQETAPTICTLLLSETSAAAISITDTEYVLGFEGDIATAHVPGSKVVGPAT-EVLESGRM 132 Query: 284 ----------IIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMA 333 + +++PL + GT+K+YY +I + +A Sbjct: 133 ETFVSVDSRQQVLKRRGGFGNGGSSFGIIVPLIVQDRPVGTIKLYYRRGIEIDRTQLAIA 192 Query: 334 VGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQ 393 GL +++STQL ++ E+ +AE++ALQ++INPHFLFN LN I+S R NP+ AR Sbjct: 193 EGLGELLSTQLSSYELDRQAELTARAEVKALQAQINPHFLFNTLNTIASLTRTNPNKARD 252 Query: 394 LIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFG-DKLTVIYDIDEEV-NCC 451 L+ S + R +E I + +EL Q + Y+ IE+ARFG +++ +DE + Sbjct: 253 LLREFSVFYRRTLESSQGSLIPLSQELTQTRRYLTIEKARFGEERIQESEHVDEGCEDIQ 312 Query: 452 IPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN 511 +PS LIQP+VENA+ H ++ +G + I VA + + I+V D G G+D + + R+ Sbjct: 313 VPSFLIQPIVENAVRHAMKD-EGALHIDIHVARDEDDILISVADDGLGMDEETVSRLLNG 371 Query: 512 E----------MPGNKIGLLNVHHRVKLLY--GEGLHI-RRLEPGTEIAFYI 550 + G I + NV R + Y G G+ I + GT + + Sbjct: 372 QGPTPHNSSGRSEGTGIAIKNVAERAERFYAAGSGMEIMSKPGQGTCVTLKL 423 >UniRef50_A8F4Q3 Signal transduction histidine kinase, LytS n=1 Tax=Thermotoga lettingae TMO RepID=A8F4Q3_THELT Length = 511 Score = 340 bits (874), Expect = 6e-92, Method: Composition-based stats. Identities = 117/555 (21%), Positives = 235/555 (42%), Gaps = 61/555 (10%) Query: 7 MLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPV 66 + + + R AL+ + +F +I+ R L K ++ K + + + +F + + G+P Sbjct: 3 LAITLLSRVALLGLIVFVVIQSYSARISLAKIFNTKKPYI-LGLLGGIFGVAGNFLGLPY 61 Query: 67 EGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISG 126 +G+++N R + ++ + G +I +IA IHRYL +GG +A C + +I AG S Sbjct: 62 KGAIINFRDMGIIVTALYGGFPAALIGSMIASIHRYL--LGGPSAFACALGTIGAGLFSS 119 Query: 127 WIN-LKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMIL-GSVCI 184 + G + + E + + + + L DIV IPM + + + Sbjct: 120 VFRKRFFHSKNKILAGSVVAIFAELIHLSIAYFFIYPPELAADIVFNALIPMTVSNFLGV 179 Query: 185 GFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIHADAV 244 G + LV+ E + +++ + L + + L + N E+L + + ++ D + Sbjct: 180 GLTLTLVKQSEQYVKNFSSQIFSITLRVFESAVRLLENPNMENLNLFSKDLAKILNVDKL 239 Query: 245 AITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSMLVIP 304 I E ++ E + IP Sbjct: 240 TI-----------KLEDEFKP------------------------EKKGECRL----FIP 260 Query: 305 LWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRAL 364 L +G + G + + M +S+ + + + A + +A +A +R Sbjct: 261 LISRGKIIGRIIVENRDGFDEDQIF--MIKQISKFVEIVVIGATAVREAILAREAMMRDF 318 Query: 365 QSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIK 424 SK+ PHF+FN L +I N + A ++I NLS LRY + + + +E+ I+ Sbjct: 319 MSKLGPHFIFNTLASIRYLTVNNANDAVKMIDNLSELLRYYFK-NQKTFVSLNEEIKIIE 377 Query: 425 DYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVA 483 Y++I +AR+GD L+ ++ + N +P +++QP++ENA+ HG GK V I Sbjct: 378 CYLSIMKARYGDILSYHINVTGDFRNHPVPPMILQPVIENAVEHG--EKNGKIYVKIEAE 435 Query: 484 ECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRRLE-P 542 + G+ + + V D+G G+ +G+ + R++ +Y + ++ + Sbjct: 436 KYGDYMILKVSDSGKGLS----------RGFKKGVGMKLLETRLENIYSKKASVKYVNDN 485 Query: 543 GTEIAFYIPNQRTPV 557 G + IP + V Sbjct: 486 GLTVLIKIPLECESV 500 >UniRef50_D0WHA5 Regulatory protein LytS n=2 Tax=Coriobacteriaceae RepID=D0WHA5_9ACTN Length = 429 Score = 339 bits (869), Expect = 2e-91, Method: Composition-based stats. Identities = 122/412 (29%), Positives = 214/412 (51%), Gaps = 19/412 (4%) Query: 156 VIVWAPTTALGIDIVSKIGIPMILGS------VCIGFIVLLVQSVEGEKEASAARQAKLA 209 V++ A G +V I P +GS +L++ + + A+Q+ Sbjct: 13 VVLLATLLLSGGTLVYSIYSPAQVGSFTPIAGTSFTLCLLILVYMRSNPDTIRAQQSDTI 72 Query: 210 LDIANKTLPLFR-HVNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDD 268 L IA++TL + V ES +++C ++ A AVAIT+ +H+L Y G E + G Sbjct: 73 LRIASQTLECLQNGVTIESAQRICRLLLPATSARAVAITDREHILGYSGDQEISNPGGSP 132 Query: 269 FISPTTRQAMNYGKIIIKNNDEAHRTP----EIHSMLVIPLWEKGVVTGTLKIYYCHAHQ 324 + T + GK + + EA P + + +++PL + GTLK+Y+ A Sbjct: 133 IRTKATHATLKDGKTRVLSTPEAIGFPSSVKNLRAGIIVPLRRGEAIVGTLKLYFRRARN 192 Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 I + +A GL +++STQ+ +Q ++A ELRALQS+INPHFLFN +N I+S Sbjct: 193 INETQLALAEGLGELLSTQIAAVELDQQVKLATAMELRALQSQINPHFLFNTINTIASLT 252 Query: 385 RLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARF-GDKLTVIYD 443 R +PD AR L+ + + R +E + I++ +E+ Q + Y A E ARF GD+L + + Sbjct: 253 RTDPDRARVLLREFAVFYRRTLE-DAQDMIELDREMDQTQRYFAFELARFGGDRLNLQVE 311 Query: 444 IDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDP 502 ++ + + +P+ LIQPLVENA+ H + P +G + + G+ I+V D G G++P Sbjct: 312 VEPGLEDFLVPAFLIQPLVENAVKHAM-PDQGMLHIVVRAESDGDDAIISVSDDGVGMEP 370 Query: 503 KVIERV-EANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYI 550 + ++ ++ E G I + N+ R+++ +G ++ R+ GT + + Sbjct: 371 EQSRKLEQSPESRGTGIAMKNITERLRVFFGTESYMEVSSRIGEGTVVRLVL 422 >UniRef50_C8WPP3 Signal transduction histidine kinase, LytS n=2 Tax=Coriobacteriaceae RepID=C8WPP3_EGGLE Length = 438 Score = 338 bits (867), Expect = 4e-91, Method: Composition-based stats. Identities = 129/418 (30%), Positives = 211/418 (50%), Gaps = 22/418 (5%) Query: 150 TLTMILVIVWAPTTALGIDIVSKIGIP------MILGSVCIGFIVLLVQSVEGEKEASAA 203 TL M + V A G+ ++ I +P M+ V +++V + + ++ A Sbjct: 17 TLEMFMFTVTA---LSGLVLLWSIAVPYRNVAIMVCAGVVFTLSIVVVIRLIMDPDSVRA 73 Query: 204 RQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHN 262 RQ+ L +A++TL ++ ++ +K+C ++ A AVAIT+ +L Y G E Sbjct: 74 RQSDSMLKLASQTLTCMNDGMDYKAAQKICGLLLPSTAAIAVAITDKKQILGYAGFEEAQ 133 Query: 263 YQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTP----EIHSMLVIPLWEKGVVTGTLKIY 318 G + T + GK+ I E P I + +++PL V GTLK Y Sbjct: 134 NLPGSIIRTHATHATLADGKLRILFTPEDIGFPSESSNIKAAIIVPLAIGRNVEGTLKFY 193 Query: 319 YCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALN 378 Y A I+ + + +A G +++STQ+ S E+ ++A + EL+ LQS+INPHFLFN +N Sbjct: 194 YRRAKHISETQKSIAEGFGKLLSTQMAASALEEQTQLATRMELKMLQSQINPHFLFNTIN 253 Query: 379 AISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFG-DK 437 I+S IR +P+TAR+L+ + + R +E D + +E+ Q K Y E ARFG D+ Sbjct: 254 TIASLIRTDPETARKLLREFAVFYRRTLEDSADLIV-FAREMEQTKRYFTFEVARFGADR 312 Query: 438 LTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 + + ID V + +P L+QPLVENA+ H + P +GK + ++ GN V + V D Sbjct: 313 VEMEMRIDPRVEDMLVPPFLLQPLVENAVRHAM-PSEGKLTIEVTGEVTGNDVIVRVCDN 371 Query: 497 GHGIDPKVIERVEANEMP-GNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYI 550 G G+ + + E G I + NVH R+ +G G H+ L GT + + Sbjct: 372 GVGMTEEARCNILHPESSLGLGIAVKNVHDRICGYFGPGTHMEVESELGKGTCVILVL 429 >UniRef50_C6WDP3 Signal transduction histidine kinase, LytS n=2 Tax=Pseudonocardineae RepID=C6WDP3_ACTMD Length = 428 Score = 337 bits (864), Expect = 9e-91, Method: Composition-based stats. Identities = 116/403 (28%), Positives = 198/403 (49%), Gaps = 13/403 (3%) Query: 169 IVSKIGIPMILGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSES 227 + + + +I +G V+L ++ A L +K R + +E+ Sbjct: 17 LTERAVLGVIATLAVLGLFVMLCRARRVSTSVEDAV--MDMLHRMSKASADLREGLTAEA 74 Query: 228 LRKVCEIIRDDIHADAVAITN-TDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIK 286 K +R+ + AV IT+ T VL++ G +Y+ I R+ K Sbjct: 75 ADKATPHLREMLRCVAVGITDSTGSVLSWDGGAADHYELMRGHIEQAIREVHKEHVEHRK 134 Query: 287 NNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEV 346 + + +HS +++PL + V GTL + + MA ++ +STQLE+ Sbjct: 135 LDCDLSGPCPMHSAVIVPLIVESEVAGTLIVVSGVPN---KRQIRMAEETARFVSTQLEL 191 Query: 347 SRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNI 406 ++ R+ +AE+RAL+++I+PHF++NALN ISS IR +P AR+L+ + + RY+ Sbjct: 192 EVLQKSRQALAQAEVRALRAQISPHFVYNALNTISSLIRTDPVYARELLQEFAEFTRYSF 251 Query: 407 ELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAI 465 + EL I Y+ IEQAR+G +L V I E + +P L +QPLVENA+ Sbjct: 252 RTDG-FFTTLSDELTNIHRYLTIEQARYGARLEVRLRIAPEVLQVVLPFLCLQPLVENAV 310 Query: 466 VHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVI-ERVEANEMPGNKIGLLNVH 524 HG+ G G++TI+ + G I+V D G G+DP+ + E ++ G +GL N++ Sbjct: 311 RHGLAKKPGGGMLTITAEDNGAEALISVEDDGVGMDPERLFEDLKDAHQTGAHVGLGNIN 370 Query: 525 HRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRTPVASQATLL 564 HR++ ++G+ + E G +I +P R V TL+ Sbjct: 371 HRMRAVFGDDYALVVETAPEAGMKIILKVPKYRQGVRPNLTLV 413 >UniRef50_UPI0001B586EC signal transduction histidine kinase, LytS n=2 Tax=Actinomycetales RepID=UPI0001B586EC Length = 434 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 100/362 (27%), Positives = 185/362 (51%), Gaps = 17/362 (4%) Query: 208 LALDIANKTLPLFR-HVNSESLRKVCEIIRDDIHADAVAITNTDH-VLAYVGVGEHNYQN 265 A+ +K P R ++ E+ ++ + + + AV IT+++ +L++ G +Y + Sbjct: 45 QAVHRMSKATPNLRAGLDEEAANRMTAELLEVLDCLAVGITDSEGTLLSWAGEATDHYLD 104 Query: 266 GDDFISPTTRQAMNYGKIIIKNNDEA---HRTPEIHSMLVIPLWEKGVVTGTLKIYYCHA 322 D I R + + + +N T ++ + ++P+ +G TL + Sbjct: 105 VVDDIGTALR---KHRRAVADHNKMPCNHRGTCKMKTAAIVPILVEGEAEATLIVVGRTR 161 Query: 323 HQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISS 382 ++ +MA + Q + TQ E++R E+ R +AE++AL+++I+PHF++NALN IS+ Sbjct: 162 GKLV----QMAEAVGQFVCTQFELARLEESRNQLQQAEIKALRAQISPHFVYNALNTISA 217 Query: 383 SIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIY 442 IR +P+ AR+L+ + + + RY+ + +EL I Y+ IE ARFG +L V Sbjct: 218 LIRTDPEEARELLQDFADFTRYSFRTSGM-YTTLAEELRNIDRYLTIENARFGGRLEVRM 276 Query: 443 DIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGID 501 I E ++ +P L+IQPLVENA+ HG+ G VT+ + G+ I V D G G+D Sbjct: 277 KIAPEVLSVVVPFLIIQPLVENAVKHGLASKPSGGCVTVIARDDGHEALITVEDDGIGMD 336 Query: 502 PKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRR---LEPGTEIAFYIPNQRTPVA 558 P+ + + G +GL N++ R++ ++GE + G ++A +P + V Sbjct: 337 PRQLTDLRNAHRTGAHVGLGNINQRMRQVFGEDYALTVETAPGAGMKVALRVPKFKLGVR 396 Query: 559 SQ 560 Sbjct: 397 PN 398 >UniRef50_B6GAE7 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6GAE7_9ACTN Length = 466 Score = 331 bits (850), Expect = 4e-89, Method: Composition-based stats. Identities = 124/430 (28%), Positives = 209/430 (48%), Gaps = 29/430 (6%) Query: 143 LGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILGSVCIGFIVLLVQSVEGEKEASA 202 +L + +V + G++ ++ I ++L + + + S + Sbjct: 34 ALRLLAALVVFTMVGFFGYAILTGVETLTTIAA-LVLLVLFTCGFIYVFFS----PDTLR 88 Query: 203 ARQAKLALDIANKTLPLF-RHVNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEH 261 ++ + L +A+ L + ES ++C + + A +A+T+ D VLA VG Sbjct: 89 SQYTEQTLAVASGMLEDITGGLTRESAEEICRRLLPETRAMTIAVTDRDVVLACVGELAD 148 Query: 262 NYQNGDDFISPTTRQAMNYG-----KIIIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLK 316 ++ G +PTTR + +G ++ E I + ++ PL +G GTLK Sbjct: 149 DFPAGSPIHTPTTRYVIEHGIAQSFTSVMDVRGEKGSQRNIPAGIIAPLKIRGKAVGTLK 208 Query: 317 IYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNA 376 YY A + + +A G ++++STQL V E+ E+ +AE+RALQ++INPHFLFN Sbjct: 209 FYYRSARHVNRTQYALASGFAELLSTQLTVYELERQAELTARAEVRALQAQINPHFLFNT 268 Query: 377 LNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFG- 435 LN I+S R +P AR+L+ S++ R +E I +K+E+ Q Y+ E+ARFG Sbjct: 269 LNTIASFTRTDPLRARELLREFSQFYRATLENSGQ-LIPVKREIAQTLRYLTFEKARFGE 327 Query: 436 DKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGN-RVRIAV 493 D++ V D+DE+ IP+ +IQPLVENA+ H + P +G ++I+V G V I V Sbjct: 328 DRVLVSVDVDEDAEEVLIPAFVIQPLVENAVRHAM-PDEGALKISITVERAGEAAVSIRV 386 Query: 494 RDTGHGIDPKVIERV----------EANEMPGNKIGLLNVHHRVKLLYGEGLHIRR---L 540 D G G+D + R+ A + G + + N+ R+K YG Sbjct: 387 ADDGMGMDEQTAMRLFDRSIAAPDPNAPQGGGAGVAMHNISERIKRFYGPKSRTSVESAP 446 Query: 541 EPGTEIAFYI 550 GT IA ++ Sbjct: 447 GKGTTIALHL 456 >UniRef50_A4E9X1 Putative uncharacterized protein n=2 Tax=Collinsella RepID=A4E9X1_9ACTN Length = 484 Score = 330 bits (847), Expect = 8e-89, Method: Composition-based stats. Identities = 123/443 (27%), Positives = 192/443 (43%), Gaps = 35/443 (7%) Query: 132 IPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILGSVCIGFIVLLV 191 AQ IL G++ L ++L+ +V G+ M + F V Sbjct: 41 FRTAQHVVQAILLGIVVPLLILLLIWDLTDNPNPVPAVVVIAGLVM------LCFFFSYV 94 Query: 192 QSVEGEKEASAARQAKLALDIANKTLPLF-RHVNSESLRKVCEIIRDDIHADAVAITNTD 250 V + + L IA+K R + E+ +II + A A+ T+ Sbjct: 95 FLV---PDDLTSSATDRTLAIASKIFAYTSRGLTPEAALGASKIILSETTASAICFTDGK 151 Query: 251 HVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRT----PEIHSMLVIPLW 306 VLA G G + TT +N G+ + + D + T P + + +V PL Sbjct: 152 QVLASWGEDSAKCPAGTPVVLRTTLNVINSGEQSVFSRDASTETGGYFPRLRAGIVAPLT 211 Query: 307 EKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQS 366 +G GTL++YY I +A G + +ISTQL E+ E+ + ELRALQS Sbjct: 212 VRGHCVGTLELYYPRLSSIDMRQTALASGFADLISTQLASFELERQDELTARVELRALQS 271 Query: 367 KINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDY 426 +++PHFLFN ++ I S +R PD AR L+ + S Y R + D ++ E+ Q Y Sbjct: 272 QVDPHFLFNTISTIVSLVRTEPDKARSLLIDFSNYYRQTLS-DSDTLTTLEHEVEQGTRY 330 Query: 427 IAIEQARFGD-KLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAE 484 I + QAR+GD +L V DID EV +C +P ++QPL+EN I H Q + + E Sbjct: 331 INLMQARYGDGRLRVSVDIDFEVRDCMVPPFILQPLLENCIKHA-QRETEPLSIHVRAFE 389 Query: 485 CGNRVRIAVRDTGHGIDPKVIERVEANE--------------MPGNKIGLLNVHHRVKLL 530 + + I V D G G+ +V + G + L NV R+ Sbjct: 390 TDDGLEIIVEDDGIGMSEEVCAHLFEQHRLEEPESITADGSVKRGCGLALFNVLQRIHFF 449 Query: 531 YGEGLHI---RRLEPGTEIAFYI 550 YGE + + GT++ + Sbjct: 450 YGEDSGMRVKSQEGVGTQVIVEL 472 >UniRef50_C4FAQ4 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAQ4_9ACTN Length = 495 Score = 328 bits (842), Expect = 3e-88, Method: Composition-based stats. Identities = 111/482 (23%), Positives = 195/482 (40%), Gaps = 65/482 (13%) Query: 130 LKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILGSVCIGFIVL 189 AQ W + L + L ++ + + + I G V + F Sbjct: 21 KFFRVAQSWALRGLILCVPMLLGLLALEFVTNPNPVP-------AVITIAGLVLLCFFFA 73 Query: 190 LVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDDIHADAVAITN 248 V + SA L IA+K R + E+ C++I + A A+ IT+ Sbjct: 74 YVFVAPDDFSLSA---TDRTLGIASKIFAYTRHGLAPEATLGACKLILPETLASAICITD 130 Query: 249 TDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNN-----DEAHRTPEIHSMLVI 303 V+A G G + +T + + ++ + DE + P + + + Sbjct: 131 GTAVVASWGEDSDRCPTGTPVVLESTLRVIENERMEVFARETTGPDEPYFFPRLQAGITA 190 Query: 304 PLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRA 363 PL + GT ++YY I + +A G +++ISTQL E+ +++ + ELRA Sbjct: 191 PLIVRDRCMGTFELYYPRYSDIDARQTALATGFAELISTQLASFELERQEDLSARMELRA 250 Query: 364 LQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQI 423 LQS+++PHFLFN + I S +R P+ AR L+ + S Y R + D ++ EL Q Sbjct: 251 LQSQVDPHFLFNTIGTIVSLVRTEPEKARSLLIDFSNYYRQTLS-NSDALTSLENELDQG 309 Query: 424 KDYIAIEQARFGD-KLTVIYDIDE-EVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTIS 481 YI + QAR+GD +L + D D ++C +P ++QPL+EN I H ++ + +S Sbjct: 310 MRYINLMQARYGDGRLKLSVDFDPFTLDCRVPPFILQPLLENCIKHAMREV-EPLSIKLS 368 Query: 482 VAECGNRVRIAVRDTGHGIDPKVIERVEA------------------------------- 510 E + ++I V D G G+ + + + Sbjct: 369 SLETDDGIQIVVEDDGIGMSEETLAHLLDVKRDVDNTCPCGCTEEDGECVEAKLESMSRR 428 Query: 511 --------NEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYI---PNQRTP 556 + G + L+NV R+ +G I + GT + + P++ Sbjct: 429 SAPTTADGSLRRGGGLALVNVLMRIHFFFGAESGIHVESQEGVGTRVTVDLIGEPHEPEG 488 Query: 557 VA 558 A Sbjct: 489 TA 490 >UniRef50_A4E9W6 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W6_9ACTN Length = 447 Score = 323 bits (830), Expect = 8e-87, Method: Composition-based stats. Identities = 111/441 (25%), Positives = 203/441 (46%), Gaps = 31/441 (7%) Query: 133 PKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIP-MILGSVCIGFIVLLV 191 +AQR + ++ + +++ + +V+ I ++ + + + Sbjct: 4 RRAQRDSSISIFRIIAVACAICVLVYFI------FALVTGIEPIATVIACALLCIFLCIF 57 Query: 192 QSVEGEKEASAARQAKLALDIANKTLPLFRH-VNSESLRKVCEIIRDDIHADAVAITNTD 250 + ++ ++ + L +A+ L + + ES R VC I + A VAIT+ D Sbjct: 58 IFLTLNPDSVRSQYTEETLSVASAMLEDIKGGLTQESARLVCRRILPETRAMTVAITDED 117 Query: 251 HVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTP-----EIHSMLVIPL 305 +VLA G E + TR + +G + N ++ + ++ P+ Sbjct: 118 NVLACAGEFEEKLLPDTPIHTLATRYVIEHGIVQSFNRMVDVVGSDGSHNQVPAGIIAPI 177 Query: 306 WEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQ 365 GTLK YY + + +A G ++I+STQL + E +E+ +AE+RALQ Sbjct: 178 KVGDRTVGTLKFYYKTPRAVDRTQYALASGFAEILSTQLAIHELEVQKELTARAEVRALQ 237 Query: 366 SKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKD 425 ++INPHFLFN LN I+S R +P AR+L+ S + R ++ I + +E+ Q K Sbjct: 238 AQINPHFLFNTLNTIASFTRTDPLRARELLREFSSFYRATLDNSG-SLIPVSREVAQTKR 296 Query: 426 YIAIEQARFG-DKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVA 483 Y+ E+ARFG D++ +D+ E+V + +P+ +IQP+VENA+ HG+ + ++V Sbjct: 297 YLTFEKARFGEDRVLATFDVSEDVEDTLVPAFVIQPIVENAVRHGMGD-DDALRIDVTVH 355 Query: 484 ECGNR-VRIAVRDTGHGIDPKVIERVEANEM----------PGNKIGLLNVHHRVKLLYG 532 + G + IAV D G G+D R+ G + + N+ R+ YG Sbjct: 356 QDGEDAILIAVADNGVGMDEGTAARLFDERSARPDASSPQGGGAGVAMHNISERIHRFYG 415 Query: 533 E-GL-HIRR-LEPGTEIAFYI 550 + GT++ ++ Sbjct: 416 PHSYTRVESAPGKGTKVLLHL 436 >UniRef50_D2B6F5 Signal transduction histidine kinase, LytS n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B6F5_STRRD Length = 394 Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats. Identities = 113/389 (29%), Positives = 186/389 (47%), Gaps = 21/389 (5%) Query: 177 MILGSVCIGFIVLLVQSVEGEKEASAARQAKLA-LDIANKTLPLFR-HVNSESLRKVCEI 234 + S +GF++ + A +A A L I P R + +S RK Sbjct: 10 LCALSTFLGFVLSRRRPASPRHPAGLPDEATFATLHITALAAPSLRAGLTRDSARKAIRH 69 Query: 235 IRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHR- 293 +R + A+A+T+ D VLA+ G + D R + G+ + D Sbjct: 70 LRTLLGVSAIAVTDADGVLAWDGAAGCH----RDHAPEHARTVFSSGRPYVVAGDAIACD 125 Query: 294 --TPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQ 351 I V+PL G V G L Y ++++ L +++ +S QLE++ + Sbjct: 126 TPGCAIRGAAVVPLTVDGRVIGALAAY---DTEVSAGLVRTVTEVARWVSGQLELAELDS 182 Query: 352 LREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDD 411 R A +AE RAL+++I+PHF++N+L I+S +R +P+ AR+L+ + + + R+ + D Sbjct: 183 SRRRAMEAETRALRAQISPHFVYNSLTTIASFVRTDPERARELLMDFADFTRHALRRGGD 242 Query: 412 EQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQ 470 + EL + Y+ +E+ARFG++L + E + +P L +QPLVENAI HGI Sbjct: 243 -FTTLADELRCVDRYLLLERARFGERLRFTVRVAPEVLPVPVPFLCLQPLVENAIKHGIA 301 Query: 471 PCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANE----MPGNKIGLLNVHHR 526 G G V + V + G I+V D G G+DP R+ ++ IGL NV R Sbjct: 302 ATGGSGEVRVVVRDAGPEAHISVEDDGLGMDPGRARRLLDDDPCQGPGEGGIGLANVDVR 361 Query: 527 VKLLYGEGLHI---RRLEPGTEIAFYIPN 552 ++ +YGEG + L GT+I +P Sbjct: 362 LRQIYGEGYGLVVETALGAGTKIRLRVPK 390 >UniRef50_A0JUQ0 Signal transduction histidine kinase, LytS n=8 Tax=Actinomycetales RepID=A0JUQ0_ARTS2 Length = 405 Score = 315 bits (807), Expect = 4e-84, Method: Composition-based stats. Identities = 103/376 (27%), Positives = 180/376 (47%), Gaps = 16/376 (4%) Query: 193 SVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDDIHADAVAITNTDH 251 E A R L A++ R +N K +R + DA+AIT+T Sbjct: 31 RSFRELGTDAERATYKTLHAASRAGQHLRTGLNPAGAAKASRQLRTILGCDALAITDTSG 90 Query: 252 VLAYVGVGEHNYQN----GDDFISPTTRQAMNYGKIIIKNNDEAHRTPEI---HSMLVIP 304 VLA+ G E + + + G++ + D A ++++ P Sbjct: 91 VLAWDGAAEELKPSLMGLAAKVLDGGHTAVIPAGEMQMLAGDAASGAITTDIERAVVIAP 150 Query: 305 LWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRAL 364 + V G + + A + L ++ ++ Q+E++ + R + +AE+RAL Sbjct: 151 IKAGARVVGVIAAFAPSAG---AGLVRATGEVADWVAAQVELAELDASRTLLMEAEVRAL 207 Query: 365 QSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIK 424 +++I+PHF++N+LNAI+S I +P AR+L+ + + RY+ D + +EL I Sbjct: 208 RAQISPHFIYNSLNAIASFINTDPVRARELVVEFADFTRYSFRRHGD-FTTLAEELRCID 266 Query: 425 DYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVA 483 Y+ +E+ARFGD++ V I E ++ IP L +QPLVENA+ HG++ +G G +TIS Sbjct: 267 RYLLLERARFGDRVQVSLRIAPEVLSTVIPFLSLQPLVENAVRHGLEAKEGPGHITISAN 326 Query: 484 ECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRL 540 + G + + D G G+DP+ + + A + +GL NV R++ +YGE + Sbjct: 327 DSGAFAEVTIEDDGVGMDPEQLRSMLAGHSDSDHVGLRNVDARLRQVYGEDNGLVIETAP 386 Query: 541 EPGTEIAFYIPNQRTP 556 GT I +P + Sbjct: 387 GEGTLITMRVPKSQPG 402 >UniRef50_Q5YL06 Putative sensor protein n=1 Tax=Aeromonas hydrophila RepID=Q5YL06_AERHY Length = 440 Score = 308 bits (791), Expect = 2e-82, Method: Composition-based stats. Identities = 168/299 (56%), Positives = 223/299 (74%), Gaps = 1/299 (0%) Query: 7 MLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPV 66 MLLAVF+RAALML+ LFFL R R F+ L K H+P EL+ V AIF LFA+FST++G+PV Sbjct: 2 MLLAVFERAALMLMTLFFLTRTRPFQRLFQKRDHTPAELVLVAAIFCLFAVFSTYTGIPV 61 Query: 67 EGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISG 126 EG+L+NVRIIA++SGGILFGPWVGI GVI+G+HRYLID+ G T+IPC I SI+AG ++ Sbjct: 62 EGALINVRIIAIISGGILFGPWVGIPAGVISGLHRYLIDMDGHTSIPCLIASIIAGLLAT 121 Query: 127 WINLKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILGSVCIGF 186 W++L+ K++ W GIL GM CE LTM+L+ A+G++IVS I PMI G++CIG Sbjct: 122 WLHLRCRKSRLWLYGILAGMACEGLTMLLIWQLTEPHAVGVEIVSHIAYPMIAGALCIGL 181 Query: 187 IVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIHADAVAI 246 I+ LVQ ++ EKE AA+QAKLALDIANKTLP F++++ SL +VC IIR +I ADAVAI Sbjct: 182 IIKLVQDLDDEKELIAAKQAKLALDIANKTLPFFQNIDRHSLSQVCGIIRSEISADAVAI 241 Query: 247 TNTDHVLAYVGVGEHNY-QNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSMLVIP 304 T+T VLAYVGVG+ Y + IS T++A+ +III N+ + + HS+++IP Sbjct: 242 TDTRDVLAYVGVGKDYYELDEHHAISAMTQRAVLLDQIIINNDLRQYHLSDFHSVIIIP 300 >UniRef50_A4F5Z4 Sensor kinase, two-component system n=24 Tax=Actinomycetales RepID=A4F5Z4_SACEN Length = 422 Score = 308 bits (789), Expect = 5e-82, Method: Composition-based stats. Identities = 102/396 (25%), Positives = 187/396 (47%), Gaps = 23/396 (5%) Query: 169 IVSKIGIPMILGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFR-HVNSES 227 + + + + + V+L +S A A AL P R + ES Sbjct: 13 LTERTVLTTLAALAVLAMFVMLCRSRRVSTSVEDATLA--ALHQVTSAAPHLRAGLTQES 70 Query: 228 LRKVCEIIRDDIHADAVAITNTDH-VLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIK 286 + +R + AV + + + +L++ G H+Y + Q + GK Sbjct: 71 ADQTAPHLRALLGCIAVGVVDAEGTLLSWDGEANHHY---GGLRTRI-EQVLRTGKREYV 126 Query: 287 NNDE---AHRTPEIHSMLVIPLWEKGVVTGT-LKIYYCHAHQITSSLQEMAVGLSQIIST 342 ++ E R + +V+PL +G G + I ++ + A ++ +ST Sbjct: 127 DHGEVACEQRPCVMRHAVVVPLEVEGENRGALVIISAGDRRRLLRA----AGEVANHVST 182 Query: 343 QLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYL 402 QLE++ ++ +E +AE+RAL+++I+PHF++NALN ISS IR +P+ AR L+ + + Sbjct: 183 QLELAELQESKERLARAEVRALRAQISPHFIYNALNTISSQIRNDPEQARDLLQEFADFT 242 Query: 403 RYNIELKDDEQIDIKKELYQIKDYIAIEQARFG-DKLTVIYDIDEE-VNCCIPSLLIQPL 460 RY+ + E+ I Y+ +E+ARFG D+L V I E + +P L +QPL Sbjct: 243 RYSFRTSG-LYTTLADEIRNIDRYLTLERARFGPDRLKVQLKIAPEVLPVVVPFLALQPL 301 Query: 461 VENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIE-RVEANEMPGNKIG 519 VENA+ HG+ G G V++ + G I+V D G G++P+ ++ + + G +G Sbjct: 302 VENAVRHGLANKPGGGTVSVIAEDNGVEALISVDDDGIGMNPERLDAELADAHLTGAHVG 361 Query: 520 LLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPN 552 L N+++R++ +G + G ++ +P Sbjct: 362 LGNINNRMRATFGNDYGLVVETEEGAGMKVIMRVPK 397 >UniRef50_C0BEZ4 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=C0BEZ4_9FIRM Length = 574 Score = 303 bits (778), Expect = 8e-81, Method: Composition-based stats. Identities = 68/247 (27%), Positives = 121/247 (48%), Gaps = 13/247 (5%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 +++S + M V + +++ Q K EL+ALQ++INPHFL+N L+A Sbjct: 334 TEITTLSNSFEHMVVKIQKLMEQV------RQEEITLRKTELKALQAQINPHFLYNTLDA 387 Query: 380 ISSSIRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 I+ + A +++ L+R R +I K E I I+KE+ K Y+ IE R+ +K Sbjct: 388 IAWMCEDGKNEDAEEMVTALARLFRISIS-KGHELIPIEKEVEHAKSYLKIENYRYKNKF 446 Query: 439 TVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTG 497 T +++ E ++ + +QP++ENAI HG++ +G + I + E G + V D G Sbjct: 447 TYSFEVAESCLSYLCNKITLQPIIENAIYHGVKQMIDEGEIWIRIFEDGEDIIFQVEDNG 506 Query: 498 HGIDPKVIERVEANE-MPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQ 553 G+ + + E IG+ NV+ R+K+ +G + L+ GT + +P Sbjct: 507 IGMTEEQCREILRKEPGDRTGIGIKNVNDRIKIYFGSNYGLNITSELDEGTCVTIRMPKV 566 Query: 554 RTPVASQ 560 R + Sbjct: 567 REEEYEK 573 >UniRef50_Q65NG8 Putative uncharacterized protein n=2 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65NG8_BACLD Length = 594 Score = 303 bits (778), Expect = 8e-81, Method: Composition-based stats. Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 16/279 (5%) Query: 290 EAHRTPEIHSMLVIPLWEKGVVTGTLKI-YYCHAHQITSSLQEMAVGLSQIISTQLEVSR 348 + P + V+ E G + + + S + + +++S Sbjct: 321 HSMSRPILKLNAVMKTAESGNFSTLYQEEREDEIGLLGKSFNRLMFRIRELMSV------ 374 Query: 349 AEQLREMANKAELRALQSKINPHFLFNALNAISSSIRL-NPDTARQLIFNLSRYLRYNIE 407 E+ +AELRALQ++INPHFL+N L+ I+ R + L+ LS+ R ++ Sbjct: 375 TERQERQKREAELRALQAQINPHFLYNTLDTINWMARKKGAEEVSDLVQALSKLFRISLS 434 Query: 408 LKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCC-IPSLLIQPLVENAIV 466 K + I + E +++Y+ I++AR+ DKL ++ + I L++QP+VENAI Sbjct: 435 -KGKDIIPLSDEFEHVENYLKIQKARYRDKLNYSIEMTGLCDDRLILKLVLQPIVENAIY 493 Query: 467 HGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV---EANEMPGNKIGLLNV 523 HGI+ KG G + I E + I + D G G+D + ++++ + G++NV Sbjct: 494 HGIKEKKGPGHIAIKGMEEDGSLIIKIEDDGAGMDEETLKQITDQFKHRDDTAGYGMINV 553 Query: 524 HHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRTPVAS 559 H R+ L +GE I R GT + +P S Sbjct: 554 HERIALTFGEPYGITVESRKGAGTAVTIRLPILAKGGTS 592 >UniRef50_C6J483 Multi-sensor signal transduction histidine kinase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J483_9BACL Length = 596 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 76/278 (27%), Positives = 127/278 (45%), Gaps = 16/278 (5%) Query: 292 HRTPEIHSMLVIPLWEKGVVTGTLKIY-YCHAHQITSSLQEMAVGLSQIISTQLEVSRAE 350 P + + E+G + + Q++ M + +++ + Sbjct: 321 ISQPIRKLERSVQMVERGDFGTNVYVSGAYEVEQLSKRFNLMLRRIRELMDQII------ 374 Query: 351 QLREMANKAELRALQSKINPHFLFNALNAISSSIRLN-PDTARQLIFNLSRYLRYNIELK 409 Q +E K+EL LQS+INPHFL+N LN+++ L + I +LSR+ R ++ K Sbjct: 375 QEQEAKRKSELDVLQSQINPHFLYNTLNSVTRLAELGRNEEVVTTITSLSRFFRISLS-K 433 Query: 410 DDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHG 468 I ++ EL ++ Y+ I+ RF +K DE + C L++QPLVENAI HG Sbjct: 434 GKHIISVQDELEHVRHYLIIQTIRFKNKFRYEIRADEAALKCSTLKLILQPLVENAIHHG 493 Query: 469 IQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANE---MPGNKIGLLNVHH 525 I+ +G + I G + +RD G G+ P +E++ + G+ +G+ NV Sbjct: 494 IEKSAEQGFIDIEARLEGENLIFRIRDNGIGMSPDTVEKLFSGNIRSESGSGVGVRNVQE 553 Query: 526 RVKLLYGEGLHI---RRLEPGTEIAFYIPNQRTPVASQ 560 R+ L YG G + E GT + IP + Q Sbjct: 554 RITLYYGPGYGLHFESEPEEGTTVTITIPAVQPESLEQ 591 >UniRef50_C5EHM0 Histidine kinase internal region n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHM0_9FIRM Length = 605 Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats. Identities = 78/277 (28%), Positives = 135/277 (48%), Gaps = 18/277 (6%) Query: 291 AHRTPEIHSMLVIPLWEKGVVTGTLKIYY-CHAHQITSSLQEMAVGLSQIISTQLEVSRA 349 A P + + ++G T + ++T S M ++ +I Sbjct: 332 AMARPIKRLCVAMSQVQEGDFTVRVPNRRKDEIGELTDSFNYMVDKINTLIRQVY----- 386 Query: 350 EQLREMANKAELRALQSKINPHFLFNALNAISSS-IRLNPDTARQLIFNLSRYLRYNIEL 408 Q + AE++ALQ++INPHFL+N L++++ I +I +L +RY IE Sbjct: 387 -QEKIAQKNAEVQALQAQINPHFLYNTLDSVNWMLIDREEYDISDIIISLGSLMRYCIE- 444 Query: 409 KDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNC-CIPSLLIQPLVENAIVH 467 ++ + + +E+ + Y+ I++ R DKL +D+ + +P L++QP+VENAI H Sbjct: 445 DENAFVPLDREVEYVISYLKIQKNRLEDKLEYQVQVDDRLRQEKVPKLILQPMVENAITH 504 Query: 468 GIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEA-----NEMPGNKIGLLN 522 GI+P K KG V+I + + G+ + + V D G G+ P+ + ++ + IGL N Sbjct: 505 GIEPRKQKGKVSILIRDAGDEILVTVEDDGIGMTPEQLNHLKEELPDLEKEGHTGIGLRN 564 Query: 523 VHHRVKLLYGEGLHIRRL---EPGTEIAFYIPNQRTP 556 V R++L YGE IR GT I IP + + Sbjct: 565 VDRRIRLHYGEQYRIRIESVYGKGTSIHLRIPKENSG 601 >UniRef50_A8RMQ3 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RMQ3_9CLOT Length = 620 Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats. Identities = 71/275 (25%), Positives = 138/275 (50%), Gaps = 21/275 (7%) Query: 300 MLVIPLWEKGVVTGTLKI-YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANK 358 + + G + +++ + S M + +I T + +E + Sbjct: 352 VKAMEQVCAGNLETSVETERGDEIGVLYDSFNHMTGEMRNLIDTIY------REQEKLRR 405 Query: 359 AELRALQSKINPHFLFNALNAISSSIRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIK 417 EL+ALQ++INPHFL+N L++I S+R+ + + +++ L+ + + ++ K + I I+ Sbjct: 406 EELKALQAQINPHFLYNTLDSIIWSLRMRQVEESIEMLTALTDFFKISLS-KGRDIITIE 464 Query: 418 KELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKG 476 +E+ IK Y++I+ R+ +K +D ++C P L++QP+VENAI HGI+P + KG Sbjct: 465 EEVKHIKSYLSIQHRRYQEKFDYDIHVDPSILSCRTPKLILQPVVENAIYHGIKPMEEKG 524 Query: 477 VVTISVAECGNRVRIAVRDTGHGIDPKVIERVE------ANEMPGNKIGLLNVHHRVKLL 530 + I + V + V+DTG G+D R+ +++ G G+ NV+ ++K++ Sbjct: 525 YIYIHIFPQEGDVILQVQDTGMGMDEDTCRRLNRELDTISSDQQGTGYGVRNVNDKIKIV 584 Query: 531 YGEGLHI---RRLEPGTEIAFYIPNQRTPVASQAT 562 YG + + GT + I + AS + Sbjct: 585 YGSKYGVTIESAMGEGTVVTLRI--GKKGEASDES 617 >UniRef50_C9NAB2 Signal transduction histidine kinase, LytS n=6 Tax=Streptomyces RepID=C9NAB2_9ACTO Length = 408 Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats. Identities = 103/372 (27%), Positives = 178/372 (47%), Gaps = 27/372 (7%) Query: 206 AKLALDIANKTLPLFR-HVNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQ 264 L A+ P R + ES R+ +R + DA+ +T+ D VL + G G ++ Sbjct: 43 TFETLHTASLAAPPLRSGLTEESARRSARRLRSLLGTDALCLTDRDRVLVWDGEG-DHH- 100 Query: 265 NGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQ 324 + + G+ ++D + + +PL V GTL Y Sbjct: 101 --GKDVMEQVEGLLASGRDTAFHSDCGDLDCTLRWAVAVPLTVDHRVLGTLVAYAPRE-- 156 Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 ++ L A +++ + QLE++ ++ R +AE++AL+++I+PHF+FN+L AI+S + Sbjct: 157 -SAVLARAAGEVARWVCVQLELAELDRSRTQIVEAEIKALRAQISPHFIFNSLAAIASFV 215 Query: 385 RLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDI 444 R +P+ AR+L+ + + RY+ E + EL+ I Y+A+ +ARFG +L+V + Sbjct: 216 RTDPERARELLLEFADFTRYSFRRHG-EFTTLADELHSIDQYLALVRARFGARLSVTLQV 274 Query: 445 DEE-VNCCIPSLLIQPLVENAIVHGIQ-----PCKGK--------GVVTISVAECGNRVR 490 E + +P L +QPLVENA+ HG++ P VTIS + G Sbjct: 275 APEVLPVSLPFLCLQPLVENAVKHGLEGAVTLPRPHGPVRAVDAPIRVTISALDAGAEAE 334 Query: 491 IAVRDTGHGIDPKVIERVEANEMP-GNKIGLLNVHHRVKLLYGEGLHIRRL---EPGTEI 546 + + D G G+DP+ + R+ E IGLLNV R++ +YG+ + G +I Sbjct: 335 VVIEDDGTGMDPERLRRILRGEGGASAGIGLLNVDERLRQVYGDDYGLVIETGVGAGMKI 394 Query: 547 AFYIPNQRTPVA 558 +P R V Sbjct: 395 TLRLPKYRAGVH 406 >UniRef50_C0BXS4 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=C0BXS4_9CLOT Length = 605 Score = 291 bits (746), Expect = 5e-77, Method: Composition-based stats. Identities = 63/241 (26%), Positives = 119/241 (49%), Gaps = 17/241 (7%) Query: 321 HAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAI 380 + +LQ MA + +++ + + +E K+E+ ALQS+INPHFL+N L++I Sbjct: 359 EIRHLGKTLQSMADNMKKLMDDIV------KEQEDKRKSEMSALQSQINPHFLYNTLDSI 412 Query: 381 SSSIRLNPDT-ARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLT 439 I A ++ L+R R ++ K I +++EL ++Y+ I++ R+ +K Sbjct: 413 IWMIENERYEGAIDMVTALARLFRISLS-KGKNIITVEQELQHAENYLIIQKVRYKNKFD 471 Query: 440 VIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGH 498 +++ C L+IQPL+EN+I HG++ G G + I + + I + D G Sbjct: 472 YDISMEKNCAQCATIKLIIQPLIENSIYHGMEYMDGDGRIYIRAYRKEDTLYIEIEDNGP 531 Query: 499 GIDPKVIERVEAN-----EMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYI 550 G+ +E ++ + G+ IG NV R++L +G+ + + GT + + Sbjct: 532 GMTEAQVEELQNGTLRSSKGKGSGIGFQNVRERIRLYFGQQYGLDVESEPDEGTTVRIRL 591 Query: 551 P 551 P Sbjct: 592 P 592 >UniRef50_A6BKJ8 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=A6BKJ8_9FIRM Length = 579 Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 72/246 (29%), Positives = 119/246 (48%), Gaps = 16/246 (6%) Query: 321 HAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAI 380 +++ MA L + + R Q + E + LQS+INPHFL+N L++I Sbjct: 338 ELKNLSAHFNIMADKLQEQMEEIRRNERERQ------QMEKKLLQSQINPHFLYNTLDSI 391 Query: 381 SSSIRLNPDT-ARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLT 439 IR A +++ L+++ R ++ + + I ++KEL Y+AI+ RF DK Sbjct: 392 IWMIRSEEYEGAGKMVSLLAKFFRISLS-QGKDMIPLEKELEHASSYLAIQNIRFKDKFE 450 Query: 440 VIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGH 498 + D + P L IQPL+ENAI HG++ G +TI + + + I V D G Sbjct: 451 FQIEADPALLKYLCPKLSIQPLLENAIYHGMEGMYEDGEITIRIYDRDGDIGIDVADNGP 510 Query: 499 GIDPKVIERVEANE----MPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIP 551 G+ + I+ + N+ G+ IG+ NV+ R++L+YGE + L+ GT IP Sbjct: 511 GMTQETIDHIMHNKVISSKRGSGIGVRNVNERIQLIYGEDYGVTITSELDEGTTATITIP 570 Query: 552 NQRTPV 557 Sbjct: 571 KMEETD 576 >UniRef50_C6LHP8 Histidine kinase n=2 Tax=Lachnospiraceae RepID=C6LHP8_9FIRM Length = 482 Score = 288 bits (739), Expect = 3e-76, Method: Composition-based stats. Identities = 74/300 (24%), Positives = 128/300 (42%), Gaps = 22/300 (7%) Query: 270 ISPTTRQAMNYGKIIIKNNDEAHRTPEIHSMLVIPLWE-KGVVTGTLKIYYCHAH--QIT 326 +S + G +++ H T I + + G T + ++ Sbjct: 189 LSILIIAVVLVGALVLGRKITRHLTSGIQQLRTVTKKAGHGDFTVRAGLEDSDEELAELG 248 Query: 327 SSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRL 386 +M + ++ + EL+ LQ++INPHFL+N L+ I Sbjct: 249 EGFNQMVERIGNLVEDI------RVEQLNLRSMELKLLQAQINPHFLYNTLDTIVWLAEA 302 Query: 387 NP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDID 445 N + ++ LS + R + K + I +++E I+ Y+ I+Q R+ D L DI Sbjct: 303 NQTEQVVMMVTALSDFFRTTLS-KGRDYITVQEEESHIRSYLKIQQFRYQDILDYEIDIP 361 Query: 446 EEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKV 504 EE++ I L +QPLVENA+ HGI+ +GKG + ++ R+ V+D G G+ + Sbjct: 362 EEMHHYQILKLTLQPLVENALYHGIKNKRGKGRILVTGYLESGRMVFLVQDNGQGMTGER 421 Query: 505 IERVEANEMPG-------NKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQR 554 + +V+ + GL NV R+KL YG I GTE+ +P + Sbjct: 422 LAQVQREMNKNETDTGDPSGFGLFNVVQRIKLNYGAQYGIWISSTFMEGTEVRVELPAIK 481 >UniRef50_C6D7S5 Cache sensor signal transduction histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7S5_PAESJ Length = 586 Score = 288 bits (739), Expect = 3e-76, Method: Composition-based stats. Identities = 77/279 (27%), Positives = 130/279 (46%), Gaps = 17/279 (6%) Query: 294 TPEIHSM-LVIPLWEKGVVTGTLKIYYC-HAHQITSSLQEMAVGLSQIISTQLEVSRAEQ 351 + I + L + E G T Q+ M + +++ + Sbjct: 312 SKPIKQLELSMKNVEHGNFEQTAIGEGPLEVRQLADRFNIMISTIKKLMRQIV------T 365 Query: 352 LREMANKAELRALQSKINPHFLFNALNAISSSIRLNP-DTARQLIFNLSRYLRYNIELKD 410 +E EL ALQ++INPHFL+N LN++ + +N + +I +LS+ R ++ K Sbjct: 366 EQESKRTYELEALQAQINPHFLYNTLNSVVRMVGMNKNEEVTTMITSLSKLFRISL-GKG 424 Query: 411 DEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDID-EEVNCCIPSLLIQPLVENAIVHGI 469 I I EL ++Y+ I+Q RF +K D E +N L++QPL+ENA+VHGI Sbjct: 425 KSIITIADELEHARNYLVIQQMRFKNKFDFSIKADGEVLNYATLKLIVQPLIENALVHGI 484 Query: 470 QPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANE---MPGNKIGLLNVHHR 526 +P KG + + + + I VRD G G+ + +++V A + G+ +G++NV R Sbjct: 485 EPSVDKGHIWVEAKVDCDDIVIEVRDNGLGMSEERLKQVTAGQVTSSKGSGVGVMNVQER 544 Query: 527 VKLLYGEGLHI---RRLEPGTEIAFYIPNQRTPVASQAT 562 ++L YG+ + LE GT + P A Sbjct: 545 IRLFYGQAYGLHFASELEEGTTVTIRFPAMELKQAEGRE 583 >UniRef50_C5EKG5 Histidine kinase internal region n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EKG5_9FIRM Length = 597 Score = 288 bits (739), Expect = 3e-76, Method: Composition-based stats. Identities = 64/248 (25%), Positives = 123/248 (49%), Gaps = 17/248 (6%) Query: 318 YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNAL 377 + M + ++ +R R+ +AE ALQ +I PHFL+N L Sbjct: 352 RKDEIGDLIHGFNHMVYKVDDLM------ARERDTRQKLVQAEFNALQDQIKPHFLYNTL 405 Query: 378 NAISSSIRLN-PDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGD 436 ++I+ R+N D ++I +L+ +LR + + + I + +E+ ++ YI+I++ R+ Sbjct: 406 DSINWMARMNRTDKVSEMIDSLTGFLRIGLS-RGKDFISLAEEIRHVESYISIQKIRYDR 464 Query: 437 KLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRD 495 L D+ E++ + +++QPLVENAI HGI+ G +TI+ E +R+ + V D Sbjct: 465 ILDYKIDVSEDLMGYRVIKMILQPLVENAIYHGIKEKDEHGTITITGEETEDRLVLCVSD 524 Query: 496 TGHGIDPKVIERVEANEMPGNK-----IGLLNVHHRVKLLYGEGLHI---RRLEPGTEIA 547 G G+ P+ + ++ A G + G++NV R++ +GE + GT++ Sbjct: 525 DGLGMKPERLAQIRAMMASGARYNDNAYGVINVQRRIQAYFGEEYGLDFRSEYTKGTQVY 584 Query: 548 FYIPNQRT 555 +P + Sbjct: 585 ITLPKKEE 592 >UniRef50_UPI0001789966 multi-sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789966 Length = 598 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 76/258 (29%), Positives = 126/258 (48%), Gaps = 16/258 (6%) Query: 303 IPLWEKGVVTGTLKI-YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAEL 361 + EKG + + + + S M + + +++ + +E+ K+EL Sbjct: 333 MMEVEKGNFDIRVPVGHSREISGLARSFNVMVLKIKELM------YQIVVEQEIKRKSEL 386 Query: 362 RALQSKINPHFLFNALNAISSSIR-LNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKEL 420 ALQ++INPHFL+N L++I D + L+R R ++ K E I I E+ Sbjct: 387 NALQAQINPHFLYNTLDSIIWMAESKKHDEVILMTSALARLFRASLS-KGKELIPIATEV 445 Query: 421 YQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVT 479 I +Y+ I+Q R+ DK+T DID + +L+QPLVENAI HGI+ +G G +T Sbjct: 446 EHITNYLKIQQMRYQDKITFALDIDRGLYPYLTLKVLLQPLVENAIYHGIKNKEGPGTIT 505 Query: 480 ISVAECGNRVRIAVRDTGHGIDPKVIERVEANEM---PGNKIGLLNVHHRVKLLYGEGLH 536 I+ R+ V+D G G+D +E + ++ N +G+ NVH R++L +G Sbjct: 506 ITGVRRDTRIEFQVKDDGIGMDQSKVETLLTSKEGTRSRNSVGIANVHQRIQLYFGTEYG 565 Query: 537 I---RRLEPGTEIAFYIP 551 + GT + IP Sbjct: 566 LSYASVPGSGTSVTLVIP 583 >UniRef50_UPI000178A843 multi-sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A843 Length = 610 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 75/275 (27%), Positives = 130/275 (47%), Gaps = 24/275 (8%) Query: 295 PEIHSMLVIPLWEKGVVTGTLKIYYC-HAHQITSSLQEMAVGLSQIISTQLEVSRAEQLR 353 P + E+G L + Q++S M + Q++ + + + Sbjct: 331 PIRRMGRTMKAVERGDFDVELPLQGPLEVVQLSSRFNLMLNKIRQLMKQIV------KEQ 384 Query: 354 EMANKAELRALQSKINPHFLFNALNAISSSI-RLNPDTARQLIFNLSRYLRYNIELKDDE 412 E K EL ALQ++INPHFL+N LN++ + + +I +LS+ R ++ K Sbjct: 385 ESKRKYELEALQAQINPHFLYNTLNSVVRMVGMSKKEEVITMITSLSKLFRLSLS-KGKT 443 Query: 413 QIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQP 471 I +++EL + Y+ I+Q R+ K + DE ++C L++QPL+ENAIVHGI+ Sbjct: 444 SISVREELEHARHYLTIQQMRYKQKFDFAIEADEAALSCYTLKLVLQPLIENAIVHGIEY 503 Query: 472 CKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMP-----------GNKIGL 520 +G + I A G + + V D G G+ P+++E + + G+ + + Sbjct: 504 MVDQGHIRIGAAVKGEWLEMTVTDNGVGMTPEMVEGILDAKETPHNPVQFINTAGSGVAV 563 Query: 521 LNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPN 552 NVH R++L YG+ + E GT + IP Sbjct: 564 RNVHDRIRLYYGKRYGLEFESEQEAGTTVRIRIPV 598 >UniRef50_A9KK43 Histidine kinase internal region n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KK43_CLOPH Length = 569 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 66/246 (26%), Positives = 115/246 (46%), Gaps = 13/246 (5%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 ++ S M V + ++++ + K EL+ALQ++INPHFL+N L+A Sbjct: 329 TEIQALSQSFDHMVVQIQELMTKV------RKEEITLRKTELKALQAQINPHFLYNTLDA 382 Query: 380 ISSSIRLN-PDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 I A +++ L++ R +I K E I I+KE+ K Y+ IE R+ ++ Sbjct: 383 IGWLCEEERSQDAVEMVNALAKLFRISIS-KGHELITIEKEVEHAKSYLKIENFRYKNQF 441 Query: 439 TVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTG 497 + ++EE + + +QP++ENAI HG+ G + I + + + V D G Sbjct: 442 VYEFIVEEECLPYYCNKITLQPIIENAIYHGLNRMVDDGHIGIHIYAEEEDIVMEVIDNG 501 Query: 498 HGIDPKVIERVEANE-MPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQ 553 G+ P+ I + E IG+ NV+ R+K+ +GE I L+ GT + +P Sbjct: 502 VGMTPEQIHSILYKEPGDKTGIGIKNVNDRIKIYFGEKYGILIESELDEGTCVKIRMPKI 561 Query: 554 RTPVAS 559 Sbjct: 562 ERENYE 567 >UniRef50_Q893H6 Two-component sensor kinase yesM n=1 Tax=Clostridium tetani RepID=Q893H6_CLOTE Length = 577 Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats. Identities = 74/263 (28%), Positives = 125/263 (47%), Gaps = 16/263 (6%) Query: 303 IPLWEKGVVTGTLKIYY-CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAEL 361 + KG +I + +M + ++I+ Q+ + AEL Sbjct: 317 MLEISKGNFDSYYEIKNNDEISILGQVFNQMLTDIKRLINKVY------QVEKQKRSAEL 370 Query: 362 RALQSKINPHFLFNALNAISSSIRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKEL 420 R LQS+INPHFL+N L+ I N +I LS + R ++ E I I E+ Sbjct: 371 RVLQSQINPHFLYNTLDTIQWKALEYNAFEVVDMINYLSNFFRISLS-DGKEFITISDEV 429 Query: 421 YQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVT 479 + +Y+ I++ R+ DK++ D+D ++ IP L++QPLVEN+I HG++ K KG++ Sbjct: 430 AHVSNYLEIQKIRYKDKISYSMDVDSSLDQYLIPKLIVQPLVENSIYHGLKLQKHKGIIN 489 Query: 480 ISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPG---NKIGLLNVHHRVKLLYGEGLH 536 +S++ + I V D G G+D + + + N N GL N++ R+KL +G+ Sbjct: 490 VSISSKDGFLFIKVIDNGLGMDVEQLRTLRKNLWESIETNHYGLYNINERLKLAFGKKYS 549 Query: 537 IRRLEP---GTEIAFYIPNQRTP 556 I GT++ IP Sbjct: 550 IEIKSELKIGTQVLLRIPLISEG 572 >UniRef50_C6D2L4 Cache sensor signal transduction histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D2L4_PAESJ Length = 596 Score = 284 bits (728), Expect = 6e-75, Method: Composition-based stats. Identities = 66/266 (24%), Positives = 127/266 (47%), Gaps = 20/266 (7%) Query: 298 HSMLVIPLWEKGVVTGTLKIYYC-----HAHQITSSLQEMAVGLSQIISTQLEVSRAEQL 352 + + K V G I + + M V + +++S + + Sbjct: 324 RPIKQLQEHMKKVEKGIFNIRVPIGNPREIASLARTFNLMVVKIEELMSQVV------RE 377 Query: 353 REMANKAELRALQSKINPHFLFNALNAISSSIR-LNPDTARQLIFNLSRYLRYNIELKDD 411 +E+ K+EL ALQ++INPHFL+N L++I D + L+R R +I + Sbjct: 378 QEIKRKSELTALQAQINPHFLYNTLDSIIWMAEGKKTDEVVLMTSALARLFRSSIS-RGQ 436 Query: 412 EQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQ 470 E + I+ E+ + +Y+ I++ R+ DKL D+D ++ +L+QPL+ENAI HGI+ Sbjct: 437 ELVSIRTEIEHVANYLTIQKIRYKDKLDFHIDVDPDIYAYRTLKVLLQPLLENAIYHGIK 496 Query: 471 PCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV---EANEMPGNKIGLLNVHHRV 527 G G + ++ + + + V D G G++ + + + ++ +G++NVH R+ Sbjct: 497 NRIGTGTIQVTGGKRDGYIWLEVSDNGVGMEAEALRTILEPRRSDRESKGVGVVNVHERI 556 Query: 528 KLLYGEGLHI---RRLEPGTEIAFYI 550 +L +G+ + + GT + I Sbjct: 557 QLYFGKDYGLTYKSVQDEGTTVTVRI 582 >UniRef50_C7H1K0 Putative sensor histidine kinase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1K0_9FIRM Length = 615 Score = 284 bits (727), Expect = 7e-75, Method: Composition-based stats. Identities = 71/252 (28%), Positives = 122/252 (48%), Gaps = 12/252 (4%) Query: 312 TGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSR-AEQLREMANKAELRALQSKINP 370 + + +Q+ S EM Q E + E + + +AEL+ALQ++INP Sbjct: 349 NDEIALLTKSYNQMLRSSNEMLDREKQYSHQLEEKNDAIELEQRLKRRAELQALQAQINP 408 Query: 371 HFLFNALNAISSSIRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAI 429 HFL+N L++I + Q++ +L+ + R + + E I +++E+ ++ Y+ I Sbjct: 409 HFLYNTLDSIRWKAEAAGAEDISQMVRDLANFFRIGLS-RGREIIPLEQEICHVRSYLDI 467 Query: 430 EQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNR 488 ++ R+GD+L I EE+ LLIQPL EN+I HGI+ KG + I+ E Sbjct: 468 QKMRYGDRLDYQIRIPEELKKLYTVKLLIQPLAENSIYHGIKESDRKGTILITAGEEPGG 527 Query: 489 VRIAVRDTGHGIDPKVIERVEANEMPG-----NKIGLLNVHHRVKLLYGEGLHI---RRL 540 V + VRD G GI + + + A+ G G+ NV+ R++L +G + Sbjct: 528 VYLCVRDDGLGISQETLTILNADLKRGVTVSDGGYGIFNVNERIRLYFGRDYGLELRSCT 587 Query: 541 EPGTEIAFYIPN 552 TE ++P Sbjct: 588 GEWTEAVIHLPK 599 >UniRef50_A8MKS8 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MKS8_ALKOO Length = 580 Score = 283 bits (726), Expect = 8e-75, Method: Composition-based stats. Identities = 76/270 (28%), Positives = 124/270 (45%), Gaps = 22/270 (8%) Query: 298 HSMLVIPLWEKGVVTGTLKIYY-----CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQL 352 + + K V G L I Y Q+ +M + +I T Sbjct: 309 KPVKELQGLMKDVEGGNLDIVYSNPREDEIGQLGEGFNKMVGQIKNLIHTVY------IE 362 Query: 353 REMANKAELRALQSKINPHFLFNALNAISSSI-RLNPDTARQLIFNLSRYLRYNIELKDD 411 ++ +AEL+ALQ++I PHFL+N L+ I ++ L+ R ++ + Sbjct: 363 QKNKREAELKALQAQIQPHFLYNTLDTIQWMALEHQAHDIVDMVDALTNLFRISLSG-GE 421 Query: 412 EQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQ 470 E I +E+ I+ Y+ +++ R+ DKL DE++ C + L+IQPLVENAI HGI+ Sbjct: 422 EIISCAEEIKHIESYLFVQKVRYEDKLEYEIIWDEQLKECKVLKLVIQPLVENAIYHGIK 481 Query: 471 PCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVE-----ANEMPGNKIGLLNVHH 525 KG G + I G + ++V D G GI+ K ++ ++ G G+ NV+ Sbjct: 482 RKKGPGRILIIGRILGKDMEVSVIDDGIGIEHKKRLQIMDVLEGRSKGEGTGYGMFNVNE 541 Query: 526 RVKLLYGEGLHI---RRLEPGTEIAFYIPN 552 R+KL++GE I GTE+ P Sbjct: 542 RIKLMFGEEYGIHITSEYGQGTEVVLRHPL 571 >UniRef50_C1I2X2 Multi-sensor signal transduction histidine kinase n=2 Tax=Clostridiales RepID=C1I2X2_9CLOT Length = 597 Score = 283 bits (726), Expect = 9e-75, Method: Composition-based stats. Identities = 72/240 (30%), Positives = 124/240 (51%), Gaps = 16/240 (6%) Query: 321 HAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAI 380 + +++ M ++ ++ + +E K+EL ALQ++INPHFL+N L++I Sbjct: 353 EIQHLGKAIKSMVKQMNMLMENIM------NEQEAKRKSELNALQAQINPHFLYNTLDSI 406 Query: 381 SSSIR-LNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLT 439 I N D A ++ L+R+ R ++ K I +K EL + Y+ I+ R+ +K T Sbjct: 407 IWMIENENYDGAIVMVTALARFFRISLS-KGKNVITVKDELEHARYYLTIQNIRYKNKFT 465 Query: 440 VIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGH 498 +EE +N L+IQPL+ENAI HG++ G G + + + + I + D G Sbjct: 466 YDIKAEEEVLNLTSIKLIIQPLIENAIYHGMEYMSGDGDILVQAYLKNDELYIDIIDNGL 525 Query: 499 GIDPKVIERVEANE----MPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIP 551 G+ +V +++ NE G+ IGL NVH R+KL +G+ + + GT I ++P Sbjct: 526 GMPQEVADKLLTNENGVQKKGSGIGLRNVHERIKLYFGDSYGLEIYSEPDEGTTIRIHMP 585 >UniRef50_B0G4V0 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0G4V0_9FIRM Length = 518 Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats. Identities = 74/263 (28%), Positives = 122/263 (46%), Gaps = 18/263 (6%) Query: 308 KGVVTGTLKI-YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQS 366 KG + + + +MA + ++ E + KA+LR LQ Sbjct: 244 KGDLDARADVDSRDEIAVLADRFNDMAGNIQTLVVKVREDEQ------KMRKADLRLLQE 297 Query: 367 KINPHFLFNALNAISSSIRLN-PDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKD 425 +INPHFL+N L+ I I N PD A +++ LS + R + K E I I++E I Sbjct: 298 QINPHFLYNTLDNIVWLIEGNEPDEAVEMVVTLSEFFRLVLS-KGKEFITIRQEEQHISS 356 Query: 426 YIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAE 484 Y+ I++ R+ D L ID E+ IP L +QPLVENA+ HGI+ + +G++ I+ + Sbjct: 357 YLQIQEKRYHDILDYHIYIDPEIYEYQIPKLTLQPLVENALYHGIKYKRSRGMIEITGTK 416 Query: 485 CGNRVRIAVRDTGHGIDPKVIERVEAN-----EMPGNKIGLLNVHHRVKLLYGEGLHI-- 537 G + + V D G G+D ++++ + + GL NV+ R+++ +G + Sbjct: 417 EGENLYLTVADDGVGMDEDELKKLGKEISRPCKETESGFGLANVNERIRMYFGAEFGMKI 476 Query: 538 -RRLEPGTEIAFYIPNQRTPVAS 559 GT I IP Sbjct: 477 WSEKGSGTRITIEIPAITDNPEK 499 >UniRef50_A6M1Q9 Multi-sensor signal transduction histidine kinase n=3 Tax=Bacteria RepID=A6M1Q9_CLOB8 Length = 602 Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats. Identities = 66/240 (27%), Positives = 120/240 (50%), Gaps = 16/240 (6%) Query: 321 HAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAI 380 + +++ M + ++ + +E K+EL ALQ++INPHFL+N L++I Sbjct: 356 EVQHLGKAIRSMVNQMHTLMDNIM------IEQESKRKSELNALQAQINPHFLYNTLDSI 409 Query: 381 SSSIR-LNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLT 439 I N D A ++ L++ R ++ K I ++ E+ ++Y+ I+ R+ +K T Sbjct: 410 IWMIENENYDGAIIMVTALAKLFRISLS-KGKNIITVRDEIEHARNYLTIQNIRYKNKFT 468 Query: 440 VIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGH 498 ++DE+ +N L+IQPL+ENAI HG++ G G + + N + I V D G Sbjct: 469 YNIEVDEKVLNYGSIKLIIQPLIENAIYHGMEFMGGDGEILVKAYAKDNELYIDVVDNGL 528 Query: 499 GIDPKVIERVEAN----EMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIP 551 G+ V + E + IGL NV+ R++L +G+ + + GT + ++P Sbjct: 529 GMLQDVANSLLTGESKIEKKSSGIGLKNVNERIQLYFGKRYGLEIYSEPDEGTTVRIHMP 588 >UniRef50_C5EU49 Multi-sensor signal transduction histidine kinase n=3 Tax=Clostridiales RepID=C5EU49_9FIRM Length = 598 Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats. Identities = 65/252 (25%), Positives = 126/252 (50%), Gaps = 17/252 (6%) Query: 321 HAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAI 380 + +S+Q MA + ++++ + + ++E LQS+INPHFL+N L+ I Sbjct: 350 EIQHLGTSIQSMARRIRKLMNDIVAEHES------KRRSEFDTLQSQINPHFLYNTLDII 403 Query: 381 SSSIRLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLT 439 I A +++ L+R+ R ++ K I ++ EL +++Y+ I+ R+ +K T Sbjct: 404 VWMIENEKQSEAVKVVTALARFFRISLS-KGKSIIPVRDELEHVRNYLMIQHMRYKNKFT 462 Query: 440 VIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGH 498 + DE+ + L++QPLVENAI HG++ G G + + + + ++V D G Sbjct: 463 YAIEADEDVLELASLKLMLQPLVENAIYHGMEFMDGDGEILVRAWRREDDLYMSVSDNGL 522 Query: 499 GIDPKVIERVEA-----NEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYI 550 G+ + ++R+ + G+ IG+ NV+ R+KL +G G + + GT + ++ Sbjct: 523 GMTREQVDRLFSATDHMPSGRGSGIGVKNVNERIKLYFGTGYGLEIQSEPDEGTTVTAHL 582 Query: 551 PNQRTPVASQAT 562 P A + Sbjct: 583 PAISYQEAKKEE 594 >UniRef50_A9KI48 Histidine kinase internal region n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KI48_CLOPH Length = 604 Score = 282 bits (721), Expect = 4e-74, Method: Composition-based stats. Identities = 78/260 (30%), Positives = 126/260 (48%), Gaps = 24/260 (9%) Query: 318 YYCHAHQITSSLQEMAVGLSQIISTQ--------LEVSRAEQLREMANKAELRALQSKIN 369 Y + S M + +++ E + ++E AE++ALQ++IN Sbjct: 344 YKDEVGNLAKSFNYMVEEIEGLVTELNLHIEALKEEKEALKVVQEQKRIAEIKALQAQIN 403 Query: 370 PHFLFNALNAISS-SIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIA 428 PHFL+N LN I+ + L +L + R + K E I I++EL +K Y+ Sbjct: 404 PHFLYNTLNTITWQAADQGAKEISILSKSLGSFFRIALS-KGREIITIREELEHVKSYLE 462 Query: 429 IEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGN 487 I++ R+ K+ +ID+E+ +C I +L+QPLVENAI HGI+ +G G ++I+ + Sbjct: 463 IQKIRYKSKINYSIEIDDEIKDCSIIKILLQPLVENAIYHGIKTKEGHGNISIAAVMKMD 522 Query: 488 RVRI-----AVRDTGHGIDPKVIERVEANEMPG-----NKIGLLNVHHRVKLLYGEGLHI 537 + I V D G GI+ +E + A G N G+ NV+ R+KL YGE + Sbjct: 523 ELTIPAIKLCVEDDGLGIEKNQLEILNAGLSKGIVDSKNGYGIYNVNQRLKLTYGEIYGL 582 Query: 538 ---RRLEPGTEIAFYIPNQR 554 +L T IP Q+ Sbjct: 583 SLESKLGEWTRATIIIPVQK 602 >UniRef50_Q2BFM1 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BFM1_9BACI Length = 588 Score = 282 bits (721), Expect = 4e-74, Method: Composition-based stats. Identities = 77/274 (28%), Positives = 135/274 (49%), Gaps = 20/274 (7%) Query: 296 EIHSML-VIPLWEKGVVTGTLKI-YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLR 353 ++ + V+ EK ++I ++ S +M ++ +IS + E Sbjct: 318 PLNQLRLVMDEVEKDNFHVQVQINRKDELGRVGDSFNKMMNKINNLISDIYQKDINE--- 374 Query: 354 EMANKAELRALQSKINPHFLFNALNAISSSIRLNP-DTARQLIFNLSRYLRYNIELKDDE 412 +A+LRAL+++INPHFL+N L+AI+ + + D ++ LSR L+ +I + E Sbjct: 375 ---KEAQLRALRAQINPHFLYNTLDAINWMAQFDKTDEVSKMTIALSRLLKSSIS-NNKE 430 Query: 413 QIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQP 471 I +++E I DY+ I++ RF DK+ IDE NC +P L++QP+VENA++HG++ Sbjct: 431 FIRLEEEAKYIDDYMTIQKIRFQDKIHYSMQIDEAAKNCLVPKLILQPIVENAMIHGLEK 490 Query: 472 CKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN------EMPGNKIGLLNVHH 525 G + I + + I + D G G+D + + + E G G+LNV + Sbjct: 491 KLENGYLLIKGYVKNDLLHIQIIDNGVGMDERTMSALLKGVYVNRDENKGTGNGILNVQN 550 Query: 526 RVKLLYGEGLHI---RRLEPGTEIAFYIPNQRTP 556 R+KLL+G + G+ +P R Sbjct: 551 RIKLLFGREYGLNIDSNENVGSVFELTLPVHREG 584 >UniRef50_C6CV60 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CV60_PAESJ Length = 611 Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats. Identities = 70/277 (25%), Positives = 127/277 (45%), Gaps = 22/277 (7%) Query: 290 EAHRTPEIHSMLV-IPLWEKGVVTGTLKI-YYCHAHQITSSLQEMAVGLSQIISTQLEVS 347 T I ++L+ + ++ G + + Y +T M + ++ + Sbjct: 324 TMFLTAPIKNLLLSMRRFQNGQFDEKVDVKYGDEIGYLTQGYNSMVESIKALVDDAYVLR 383 Query: 348 RAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRL-NPDTARQLIFNLSRYLRYNI 406 EQ +AEL+ALQ++INPHFL+N L+ I + ++I NLSR R ++ Sbjct: 384 LREQ------EAELKALQAQINPHFLYNMLDTIFWEAESAGQEKISEMIINLSRLFRLSL 437 Query: 407 ELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAI 465 + ++ KE ++ Y+++++ RF D L DI ++ I LL+QP VENAI Sbjct: 438 N-RGKSFTNVAKERELLELYLSLQKMRFRDVLEYEVDISPDLGEYVILKLLLQPFVENAI 496 Query: 466 VHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPG--------NK 517 VHGI+ +G G V ++ G+R++ + D G G+ + + ++ + Sbjct: 497 VHGIERKRGGGFVRVTGTREGDRLKFVIEDNGSGMGEEELAKLTELPKESDINVGQDTSG 556 Query: 518 IGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIP 551 + NV R+K Y + + + GT + IP Sbjct: 557 YAVRNVQERLKHYYKDDFELTYDSKPGQGTRVQLIIP 593 >UniRef50_B8HZZ4 Putative sensor with HAMP domain n=2 Tax=Clostridium RepID=B8HZZ4_CLOCE Length = 597 Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats. Identities = 66/267 (24%), Positives = 119/267 (44%), Gaps = 18/267 (6%) Query: 302 VIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAEL 361 + + Y Q++ M + +++ E + + E Sbjct: 339 SMVSTGDMETRISFPTYGPDFQQVSQGFNIMVEHIDELMKKIYE------EQRQLKEIEF 392 Query: 362 RALQSKINPHFLFNALNAISSSIRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKEL 420 +ALQS+INPHFL+N L +I L ++ L+ + R ++ K ++ I +K E Sbjct: 393 KALQSQINPHFLYNTLESIHWQALLYGHHDISTMVKALAGFYRISLS-KGEDIIPLKNES 451 Query: 421 YQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVT 479 +++Y+ I++ R+ DK+ DI EE + IP +++QPLVENAI HG++ K KG + Sbjct: 452 EHVENYMTIQEIRYKDKMESYIDIPEEFYDVKIPKMILQPLVENAIYHGLRGRKAKGFIK 511 Query: 480 ISVAECGNRVRIAVRDTGHGIDPKVIERVE---ANEMPGNKIGLLNVHHRVKLLYGEGLH 536 I+ G+ + + D G G+ I ++ + P G+ NVH R+KL G Sbjct: 512 ITAERDGDDIIVKTIDNGTGMTVDQICKLNQTLEDNDPSVGYGVRNVHRRIKLFLGSPYG 571 Query: 537 I---RRLEPGTEIAFYIPNQRTPVASQ 560 + G + + R+ + Sbjct: 572 LYYESNEYGGVTVNVRL---RSEIHKN 595 >UniRef50_D1PQX9 Putative sensor histidine kinase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQX9_9FIRM Length = 493 Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats. Identities = 72/251 (28%), Positives = 125/251 (49%), Gaps = 14/251 (5%) Query: 319 YCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALN 378 ++ ++EMA L ++ A Q + + EL LQ++INPHFL+N ++ Sbjct: 235 IRELRTLSEGVEEMAGRLHTLLE------EATQKQATLRRMELALLQAQINPHFLYNTMD 288 Query: 379 AISSSIRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDK 437 I I A Q++ +LS + R+++ K + I + +E ++ Y+ I+QAR+ D Sbjct: 289 TIIWLIEAGKSQEATQMVSDLSNFFRHSLS-KGKDIITLAEEESHVRSYLQIQQARYADI 347 Query: 438 LTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 L D+ ++ IP L +QPLVENA+ HGI+ +G G + I + G + + V D Sbjct: 348 LRYTIDLPDKFGAVRIPKLTLQPLVENALYHGIKMKRGMGHIYILGKQEGEDLVLQVTDD 407 Query: 497 GHGIDPKVIERVEANEMPGN--KIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIP 551 G G+ + ++++ + G GL +H R++LL+G G + R GT + IP Sbjct: 408 GAGMSEERLQQLIRSMENGERVGFGLSTIHERLRLLFGPGYGLTIHSREGVGTTVFVRIP 467 Query: 552 NQRTPVASQAT 562 Q + T Sbjct: 468 RQTEKEETGET 478 >UniRef50_A9AWB2 Histidine kinase internal region n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AWB2_HERA2 Length = 516 Score = 280 bits (718), Expect = 8e-74, Method: Composition-based stats. Identities = 79/264 (29%), Positives = 123/264 (46%), Gaps = 26/264 (9%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 ++ S M + +++ +LE KAELR LQ++INPHFL+N L+A Sbjct: 258 DEITELGLSFNIMVGKIKELLDAKLEEHEN------LKKAELRVLQAQINPHFLYNTLDA 311 Query: 380 ISSSIR-LNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 I L+ LSR+ R + K + I + E+ I+ Y+AI++ R+ D L Sbjct: 312 IIWMAEAKRTAQIIDLVSALSRFFRITLS-KGRDWISVPDEIAHIESYLAIQKIRYRDIL 370 Query: 439 TVIYDIDEEVNC-CIPSLLIQPLVENAIVHGIQPCKGKGVVTISV-AECGNRVRIAVRDT 496 DI E+ + L +QPLVENA+ HGI+ + G + + G+R+RI V D Sbjct: 371 DYQIDIPEDTQSTEMLKLTLQPLVENALYHGIKNKRSGGTIVVRGRWLDGDRLRIEVEDN 430 Query: 497 GHGIDPKVIERVEANEMPGN------------KIGLLNVHHRVKLLYGEGLHIRRL---E 541 G G+ + +++V GN G+ NV+ R+KL YG + Sbjct: 431 GIGMTQERLQQVRTLLEAGNLWVTGVMPIVEDGYGISNVNQRIKLYYGSDYGLSIESEHG 490 Query: 542 PGTEIAFYIPNQRTPVASQATLLL 565 GT +A IP R + +Q L L Sbjct: 491 RGTCVALIIPRYR-GITTQPPLAL 513 >UniRef50_O31516 Sensor histidine kinase yesM n=2 Tax=Bacillus subtilis group RepID=YESM_BACSU Length = 577 Score = 280 bits (717), Expect = 9e-74, Method: Composition-based stats. Identities = 71/241 (29%), Positives = 122/241 (50%), Gaps = 17/241 (7%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 A + M +++++ +E + + + EL+ALQ++INPHFL+N L + Sbjct: 347 DEAGMLNRHFTVMMKRINELMEENVEK------QLIIKETELKALQAQINPHFLYNTLES 400 Query: 380 ISSSIRLNPDT-ARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 I+ + N +++ +L LR +I +K + + I++E ++ Y+ I++ RF ++L Sbjct: 401 INWLAKANQQKQISKMVESLGFLLRNSIHMK-KDIVTIQEEADIVRHYMTIQRFRFEERL 459 Query: 439 TVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTG 497 DID+EV +C IP L +QPL ENAI + ++P + I + V I V D G Sbjct: 460 KFTLDIDDEVKHCLIPKLTLQPLAENAIQYALEPFTRPCAIRIQAKKAKGCVCITVEDNG 519 Query: 498 HGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQR 554 G+D +++E G IGL N+ R+ L +GE + E GT I IP + Sbjct: 520 PGMDGRILE-----STGGRGIGLWNIRERISLTFGEPYGLRIHSEHEKGTRIVITIPCRN 574 Query: 555 T 555 Sbjct: 575 E 575 >UniRef50_C6J7M5 Histidine kinase internal region n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7M5_9BACL Length = 579 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 62/243 (25%), Positives = 116/243 (47%), Gaps = 17/243 (6%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 + M+ +S++I E + + EL+AL ++INPHF++N+L + Sbjct: 334 DETDLLVDGFNRMSTQISELIEQV------ETEQARKKEFELQALVAQINPHFIYNSLES 387 Query: 380 ISSSI-RLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 I+S +++ +L + LR +I + I + E+ ++ Y+ I++ RF ++ Sbjct: 388 INSLAVLQGNKEISKMVVSLGKLLRISISEN-QQLITLAMEMEHVRHYLDIQKFRFEEQF 446 Query: 439 TVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTG 497 +I E + + L++QP+VENA+ H I+P K KG+++I+ E + I V D G Sbjct: 447 DYQIEIPESLKHYLTQKLIVQPIVENALYHAIEPMKEKGLISITAKEDDRDIMIDVTDNG 506 Query: 498 HGIDPKVIERVEANEM-----PGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFY 549 G + + + + G +GL NVH R+++ +G I G+ I Sbjct: 507 PGFSLDRLMNLWSKDEGNKNYRGTGVGLRNVHERLRIRFGSRYGILICSSPGHGSTIRIR 566 Query: 550 IPN 552 IP Sbjct: 567 IPK 569 >UniRef50_A9KIC4 Multi-sensor signal transduction histidine kinase n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIC4_CLOPH Length = 585 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 63/270 (23%), Positives = 135/270 (50%), Gaps = 17/270 (6%) Query: 294 TPEIHSML-VIPLWEKGVVTGTLKIY-YCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQ 351 T I + + EKG ++ + S M + +++ ++ + Sbjct: 320 TKPIKKLRDSMKEVEKGNFHEKVETSGSDEIANLGKSYNIMIQTVDELMEARV------K 373 Query: 352 LREMANKAELRALQSKINPHFLFNALNAISSSIRLNPD-TARQLIFNLSRYLRYNIELKD 410 +E K+ELRALQ++INPHFL+N L++I + + +L++ R +I + Sbjct: 374 DQEQKRKSELRALQAQINPHFLYNTLDSIVWMAEEGKNQEVVTMTASLAKLFRQSISNEA 433 Query: 411 DEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGI 469 +E +++E+ +++Y+ I++ R+ ++L + E +N + L++QPLVENA+ HG+ Sbjct: 434 EEF-TLRQEVDYVRNYLVIQKMRYKEQLNYDIQVPESILNYYVIKLILQPLVENALYHGV 492 Query: 470 QPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV---EANEMPGNKIGLLNVHHR 526 + G G + + E + V + V D G G+D + + + + +++ + N+H+R Sbjct: 493 KYKDGVGTIFVDGYETESTVVLQVIDDGIGMDEEELSHLFEKRKSTHKTSRVAIRNIHNR 552 Query: 527 VKLLYGEGLHI---RRLEPGTEIAFYIPNQ 553 ++L YG+ + + GT++ +P + Sbjct: 553 IQLHYGKEFGLSFESKKGYGTKVMITLPKK 582 >UniRef50_A4XMF9 Integral membrane sensor signal transduction histidine kinase n=2 Tax=Thermoanaerobacterales RepID=A4XMF9_CALS8 Length = 596 Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats. Identities = 71/283 (25%), Positives = 133/283 (46%), Gaps = 20/283 (7%) Query: 284 IIKNNDEAHRTPEIHSMLVIPLWEK-GVVTGTLKIYYCHAHQIT---SSLQEMAVGLSQI 339 +I + T + ++ + G + I + +I S M ++++ Sbjct: 315 VISMYFSSMLTAPLQKLVSSMKKVRQGNFREQVNIDPHASDEIAIVVSEYNNMVEKINEL 374 Query: 340 ISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPD-TARQLIFNL 398 I+ L +L +AEL+AL+++INPHFL+N L+ I + D ++I++L Sbjct: 375 INKVL------KLEIHKKEAELKALEAQINPHFLYNTLDTIFWKAEKSHDSEISEMIYSL 428 Query: 399 SRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLI 457 SR R + + E I +K E I+ Y+ ++ R+ ++L +ID E ++ IP L++ Sbjct: 429 SRLFRLTLN-RGSEFIQVKGEKELIEHYLFLQSKRYKNRLQYSIEIDPEILDYYIPKLIL 487 Query: 458 QPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGN- 516 QP VENAIVHG++ + I+ + G + ++D G G+ ++R++ G Sbjct: 488 QPFVENAIVHGMENSTTPTFIQITGKKEGENLCFTIKDNGIGMSKTQLDRIKDLLESGKE 547 Query: 517 ---KIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQ 553 + NV+ R+KL Y + + GTE+ +P Sbjct: 548 ATFGYAIKNVNERLKLYYETHFKLNIQSQPGQGTEVKLILPID 590 >UniRef50_C5RJU0 Cache sensor signal transduction histidine kinase n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJU0_CLOCL Length = 588 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 72/269 (26%), Positives = 131/269 (48%), Gaps = 20/269 (7%) Query: 299 SMLVIPLWEKGVVTGTLKIYYCHAHQ-----ITSSLQEMAVGLSQIISTQLEVSRAEQLR 353 + + K V G I + ++ + M + ++S + + Sbjct: 326 PIKQLEKSMKKVEEGNFDIQIDAKGEDEVVKLSQAFNLMLSKVRSLMSQIV------IEQ 379 Query: 354 EMANKAELRALQSKINPHFLFNALNAISSSIRLNP-DTARQLIFNLSRYLRYNIELKDDE 412 E K+EL ALQS+INPHFL+N L++I ++ +L++ R +I K Sbjct: 380 ESKRKSELDALQSQINPHFLYNTLDSIVWMAENGKSQDVITMVTSLAKLFRISIS-KGRN 438 Query: 413 QIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQP 471 I +++E+ ++Y+ I++ RF +K T + D E ++ L++QPL+EN+I HGI+ Sbjct: 439 IISVEQEIEHARNYLIIQKIRFKNKFTYDIETDPETMHLKTTKLILQPLIENSIYHGIEY 498 Query: 472 CKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMP---GNKIGLLNVHHRVK 528 + +G + IS + ++ + D G GI+P+ + + E G+ IG+ NVH R++ Sbjct: 499 MQDQGYIKISTSIVDGKLLFEISDNGLGIEPEKLPHLLEYETEPKAGSGIGVKNVHERIQ 558 Query: 529 LLYGEGLHI---RRLEPGTEIAFYIPNQR 554 L YG+ + LE GT I ++P Sbjct: 559 LTYGKEYGLEIKSELEEGTNIKIWLPIVE 587 >UniRef50_C0C1J1 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C1J1_9CLOT Length = 601 Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats. Identities = 79/255 (30%), Positives = 114/255 (44%), Gaps = 27/255 (10%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 Q+T S +M Q+I Q +AEL ALQ++INPHFL+N L Sbjct: 354 DEIGQLTLSFDKMVERTKQLIENVY------QSEIYQKEAELNALQAQINPHFLYNTLQT 407 Query: 380 ISSSIRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 I D LS+ RY+I + E + ++ E+ I++Y+ I++ RFG KL Sbjct: 408 IDMMAEEEGADEISDACQALSKIFRYSIN-RGQEFVHVQDEIVHIENYMLIQKLRFGGKL 466 Query: 439 TVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTG 497 V YDI E I LLIQP+VENA+VHG++ K VTI V + + V D G Sbjct: 467 EVRYDIQNECRELYIVKLLIQPMVENAVVHGMENVLDKCYVTIRVYRKEDCLYAEVEDNG 526 Query: 498 HGIDPKVIERVEANEMPG---------------NKIGLLNVHHRVKLLYGEGLHI---RR 539 GI P + + IGL N + R+KL +G+ I Sbjct: 527 TGIAPGQLMELNEKLARSAEQKMVHEVDYVKNHRSIGLENTNARIKLYFGQEYGITITSE 586 Query: 540 LEPGTEIAFYIPNQR 554 GT++ +P + Sbjct: 587 EGTGTKVCIKLPVRT 601 >UniRef50_C4IM92 Multi-sensor signal transduction histidine kinase n=3 Tax=Clostridium RepID=C4IM92_CLOBU Length = 595 Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats. Identities = 67/241 (27%), Positives = 122/241 (50%), Gaps = 17/241 (7%) Query: 321 HAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAI 380 + +++ M ++ ++ + +E K+EL ALQ++INPHFL+N L++I Sbjct: 356 EIEHLGKAIRSMVNQMNILMDNIIS------EQEAKRKSELNALQAQINPHFLYNTLDSI 409 Query: 381 SSSIR-LNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLT 439 I N D A ++ L+R R ++ K I ++ E+ +K+Y+ I+ R+ +K Sbjct: 410 IWMIENENYDKAIIMVTALARLFRISLS-KGKNIIPLRYEIEHVKNYLTIQSMRYKNKFI 468 Query: 440 VIYDID-EEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGH 498 + + E +N L+IQP+VENAI HG++ G G + I N + I V D G Sbjct: 469 YEFQCENETMNLASIKLVIQPVVENAIKHGMELMDGDGEILIKSYIDNNELYIDVIDNGL 528 Query: 499 GIDPKVIERVEANEMP-----GNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYI 550 G+ + +E + E G+ +G+ NV+ R+K+ +G+ I + GT + ++ Sbjct: 529 GMTQEQVESILMGENKSKNSNGSGLGIKNVNERIKIYFGDKYGIKIFSEPDEGTTVRIHM 588 Query: 551 P 551 P Sbjct: 589 P 589 >UniRef50_A4IPA9 Two-component sensor histidine kinase n=5 Tax=Bacillales RepID=A4IPA9_GEOTN Length = 595 Score = 277 bits (710), Expect = 7e-73, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 122/277 (44%), Gaps = 30/277 (10%) Query: 298 HSMLVIPLWEKGVVTGTLKIYY-----CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQL 352 + + + K G L + Y + S M + + IS AE Sbjct: 320 RPISQLTAFMKKAQAGDLTVRYHDERMDEIGILGRSFNHMLDQMQRFIS------LAEWQ 373 Query: 353 REMANKAELRALQSKINPHFLFNALNAISSSIRL-NPDTARQLIFNLSRYLRYNIELKDD 411 +AELR +Q++I PHFL+N L+ I R D +++ L++ R + K Sbjct: 374 ERQRWEAELRDMQAQIKPHFLYNTLDTIQWMARKKGADDVAEVVGALAKLFRIGLS-KGR 432 Query: 412 EQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQ 470 I +E+ IK Y+ I++ R+ DKL +DI E + + LL+QP+VENAI HGI+ Sbjct: 433 NMILFAEEIEHIKSYLHIQKVRYKDKLNYTFDIPEHLQQFYVLKLLLQPIVENAIYHGIK 492 Query: 471 PCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVE--------ANEMPG-----NK 517 +G G ++I E + I V+D G G+ + +E + A + G Sbjct: 493 QRRGPGHISIQAEERDGTMYIRVKDDGIGMSRERLEELRKSLTIDFTAGDQEGKMRNIKG 552 Query: 518 IGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIP 551 G++NV R++L +G + GT + P Sbjct: 553 YGMVNVQARLQLTFGPSYRLYIDSEEGKGTTVMIVHP 589 >UniRef50_A6M1T7 Histidine kinase internal region n=2 Tax=Clostridium RepID=A6M1T7_CLOB8 Length = 589 Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats. Identities = 70/290 (24%), Positives = 129/290 (44%), Gaps = 19/290 (6%) Query: 277 AMNYGKIIIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKI-YYCHAHQITSSLQEMAVG 335 A+ +I++ + P ++ ++G +T + Y ++ S M Sbjct: 305 ALIIAEILVIIFTRSIVNPIQKLKRLMRKAQEGDLTVSFNAKYNDEIGELGGSFNTMVKE 364 Query: 336 LSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRL-NPDTARQL 394 ++ +I + + AE+ LQ++I PHF++N L+ I N + ++ Sbjct: 365 INNLIKLV------QIEEKNKRLAEMNVLQAQIKPHFMYNTLDTIRWMAEEHNEEDIVEI 418 Query: 395 IFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIP 453 I + LR ++ K E I +K+EL ++ Y+ I++ R+ DKL D+E +N + Sbjct: 419 IEAFTNLLRISLS-KGKEIISVKEELSHVQSYLIIQKIRYEDKLDYEIQFDKEILNYKLI 477 Query: 454 SLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVI------ER 507 L++QPLVENAI HGI+ +G G + I+ N + V D G G+D + + Sbjct: 478 KLILQPLVENAIYHGIKEKRGNGKILITGKIEDNLLCFTVADNGKGMDEETLNKINNMLN 537 Query: 508 VEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQR 554 G+ NV+ R+K+++G + L GT + P Sbjct: 538 NNDGNKNQIGYGIFNVNERIKIIHGSEYGLVYRSILGEGTIVELRHPIIE 587 >UniRef50_C6CTF8 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF8_PAESJ Length = 595 Score = 276 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 78/286 (27%), Positives = 136/286 (47%), Gaps = 17/286 (5%) Query: 281 GKIIIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQII 340 G I + I + L + G Q++ M ++ ++ Sbjct: 313 GVSTIITKRMLRLSKHITKVATGKLDIVMEIDGK-----DEIGQLSRQFNSMVSSINGLV 367 Query: 341 STQLEVSRAE-QLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPD-TARQLIFNL 398 E ++ + QL N+ +L+ + S+INPHFLFNAL +I L + Q++ L Sbjct: 368 EEVQESNKMKRQLEAKQNEIKLKMMASQINPHFLFNALESIRMKAHLKGEKEISQVVRLL 427 Query: 399 SRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLI 457 + +R +IE+ + E+ ++ Y+ I++ R+ D+L+ +D V IP L+I Sbjct: 428 GKLMRRSIEVS-QRLTPLADEMDIVRCYLDIQKFRYEDRLSYELHVDPVVERVSIPPLII 486 Query: 458 QPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV-----EANE 512 QPLVENA++HG + G+VT+ G+ VR+ V D G G+ + I+++ E + Sbjct: 487 QPLVENAVIHGFENKVEGGMVTVRAVREGDYVRVDVIDNGAGMTREKIDKLTQHLNETED 546 Query: 513 MPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRT 555 N+IGL NVH R++L YG + GT+++F +P Sbjct: 547 AENNRIGLRNVHLRLQLTYGPEHGLQYESEPGIGTKVSFTLPFGED 592 >UniRef50_C9L4P8 Putative two-component sensor histidine kinase n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L4P8_RUMHA Length = 620 Score = 276 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 76/245 (31%), Positives = 127/245 (51%), Gaps = 18/245 (7%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 +I + M+ + Q++ +E R E++ LQ++INPHFL+N L++ Sbjct: 382 DEIGEIGKGINHMSGKIEQLLKKNVEDER------EKKNLEIKMLQAQINPHFLYNTLDS 435 Query: 380 ISSSIRLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 I + + + +++ LS L+ N+ +E++ +++EL ++DYI IE+ R+ + Sbjct: 436 IRWIAVIQKNASIVKMVTALSSLLK-NMAKGFNEKVTLREELNFLQDYIIIEKMRYMEMF 494 Query: 439 TVIYDIDEE--VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 V ++EE N I L +QPLVENAI GI+P G+++I V N + I+VRD Sbjct: 495 DVEIHVEEESLYNARIVKLTLQPLVENAIFSGIEPMGENGIISIHVKALENTLCISVRDN 554 Query: 497 GHGIDPKVIERVEANEMPG-----NKIGLLNVHHRVKLLYGEGLHIRRL---EPGTEIAF 548 G GI + IE++ + + IGL NV R+KL+YGE + TEI Sbjct: 555 GVGIPEEKIEKILKGKEKSKNDTMSGIGLPNVDQRIKLVYGEEYGLSIESKVGEYTEIQV 614 Query: 549 YIPNQ 553 IP + Sbjct: 615 RIPIE 619 >UniRef50_C4GDI5 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GDI5_9FIRM Length = 595 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 69/248 (27%), Positives = 128/248 (51%), Gaps = 18/248 (7%) Query: 318 YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNAL 377 Y Q+ S MA ++ +++ Q +S + + AE ALQ++INPHFL+N + Sbjct: 356 YKDEVGQLVDSYNYMAGRINALVAEQQRISEEKTI------AEFNALQAQINPHFLYNTM 409 Query: 378 NAISSSIRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGD 436 + I + D +++ LSR+ + + K D I E+ Y+ ++ RF + Sbjct: 410 DMIHWMAQARQYDKVSEIVMRLSRFYKLTLSKK-DPVSTIGDEIEHASIYVQLQNMRFEN 468 Query: 437 KLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGK-GVVTISVAECGNRVRIAVR 494 + ++ D+ +E+N C IP L +QP++ENAI+HGI G + I+ + + + + Sbjct: 469 AIDLVVDVPDELNSCHIPKLTLQPILENAILHGILEKNPPTGTIVITAW-EDDALYLLIS 527 Query: 495 DTGHGIDPKVIERVEA----NEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIA 547 D G G+D ++++ + ++ G+ + + N+H R++LLYGEG + GTE+ Sbjct: 528 DDGVGMDQELLDHLLTYTPMSKASGSNVAIYNIHSRLRLLYGEGYGLSYQSIPGRGTEVT 587 Query: 548 FYIPNQRT 555 IP +R Sbjct: 588 IRIPRERR 595 >UniRef50_C6IY77 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IY77_9BACL Length = 600 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 77/266 (28%), Positives = 132/266 (49%), Gaps = 16/266 (6%) Query: 295 PEIHSMLVIPLWEKGVVTGTLKI-YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLR 353 P ++ ++ ++G + +++ Y + S M + +++ E +++Q Sbjct: 324 PLKQTVQLMKQVQRGKLDVRVRVKYNDEIGLLGSHFNRMISRIRELLDEVAETEKSKQ-- 381 Query: 354 EMANKAELRALQSKINPHFLFNALNAISSSIRLNPDT-ARQLIFNLSRYLRYNIELKDDE 412 KA++ ALQ++INPHF++N L +I LN D +L + L LRY+I DE Sbjct: 382 ----KADMLALQNQINPHFIYNTLESIRMLAELNDDDQVAELTYLLGLLLRYSITRSADE 437 Query: 413 QIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCC-IPSLLIQPLVENAIVHGIQP 471 + I++E+ +++Y+ + Q RF DK ++I E I L+ QP+VENA+ HG++ Sbjct: 438 IVTIRQEIDHVRNYLLLLQIRFPDKFNFRFEIPESFYALPIIKLVFQPIVENAVFHGLEK 497 Query: 472 CKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGN----KIGLLNVHHRV 527 +G G +TI G V D G G+ + + + + G IGL NVH R+ Sbjct: 498 RQGSGTITIRAWSDGGDAVFTVHDDGVGMTEERLVTLNHSLTDGKTDKFGIGLRNVHERI 557 Query: 528 KLLYGEGLHI---RRLEPGTEIAFYI 550 +L YG G + RL GT + I Sbjct: 558 RLHYGHGSRLTVSSRLGEGTTVTLRI 583 >UniRef50_A8RW55 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RW55_9CLOT Length = 584 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 78/274 (28%), Positives = 133/274 (48%), Gaps = 17/274 (6%) Query: 294 TPEIHSMLVIPLWEKGVVTGTLKI-YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQL 352 P + ++ E+ + + Y + + M +I + Sbjct: 314 NPINKLIDLMEQAEQKEFAVQMHVKYKDELAVLGNKFNNMMDFTRHLIVVN------NKE 367 Query: 353 REMANKAELRALQSKINPHFLFNALNAISSSIRLNP-DTARQLIFNLSRYLRYNIELKDD 411 +E +AEL+ LQ +INPHFL+N L + IR N + A +I +LS++ R + + Sbjct: 368 QENLREAELKTLQMQINPHFLYNTLETVIWLIRSNENEKAISVITSLSKFFRIGLS-RGR 426 Query: 412 EQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE--VNCCIPSLLIQPLVENAIVHGI 469 I +++EL +K+Y+ I+ R+ DK+ IDE+ ++ IP L +QPLVENAI HGI Sbjct: 427 NIITLREELEHVKEYVKIQNTRYRDKIDFSIHIDEDSMLDYPIPKLTLQPLVENAIYHGI 486 Query: 470 QPCKGKGVVTISV-AECGNRVRIAVRDTGHGIDPKVIERVEANEMPG--NKIGLLNVHHR 526 Q G ++I + E G+R+RI+V D G G+ P +ER++ + G+ N + R Sbjct: 487 QEKPEGGAISIEIVHETGDRIRISVIDDGIGMTPAQLERLQEGLKEMAVSGFGMYNTNQR 546 Query: 527 VKLLYGEG--LHIRRL-EPGTEIAFYIPNQRTPV 557 ++ +G L I GT ++F I + Sbjct: 547 LRNYFGRESALRIESQFGEGTNVSFSINGNKRGE 580 >UniRef50_C6IY73 Two-component sensor histidine kinase n=3 Tax=Bacillales RepID=C6IY73_9BACL Length = 641 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 69/266 (25%), Positives = 111/266 (41%), Gaps = 34/266 (12%) Query: 318 YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNAL 377 + M + +++S E +AELR+LQ+ I PHFL+N L Sbjct: 374 RTDEIGLLGRRFNAMLQQIHRLLS------LTELQERQKREAELRSLQAHIKPHFLYNTL 427 Query: 378 NAISSSIRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGD 436 + I R N + ++ +LS+ R + K ++ I + E+ ++ Y+ I+ R+ Sbjct: 428 DTIHWMARRNGSEDIAEMAESLSKLFRIGLS-KGNDIIPLNDEIEHVRSYLHIQHVRYQS 486 Query: 437 KLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRD 495 KL I E+ + L++QP+VENAI HGI+ +G G V I AE + I +RD Sbjct: 487 KLDYSLHIAPEIRGVYVLKLILQPIVENAIYHGIKERRGPGRVVIEAAEDAGMLVITIRD 546 Query: 496 TGHGIDPKVIERVEANEMP----------------------GNKIGLLNVHHRVKLLYGE 533 G GI P + R++ G G+LNV R+ L +G Sbjct: 547 DGKGIPPDKLARLQKELQSAGTADGREKGSEPAGASNAGEGGQGYGMLNVQARIALTFGP 606 Query: 534 GLHI---RRLEPGTEIAFYIPNQRTP 556 + GT + P R Sbjct: 607 KYGLTIQSEEGRGTVVTVTHPIIRDE 632 >UniRef50_A9KL84 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KL84_CLOPH Length = 580 Score = 275 bits (705), Expect = 3e-72, Method: Composition-based stats. Identities = 71/272 (26%), Positives = 125/272 (45%), Gaps = 18/272 (6%) Query: 295 PEIHSMLVIPLWEKGVVTGTLKIYYCHAHQIT---SSLQEMAVGLSQIISTQLEVSRAEQ 351 P + L + G ++ ++ ++ M +S ++ R ++ Sbjct: 305 PIYKLSKAMQLVKDGSFDLPKQVISGKKDELAFLANNFYTMTEQISFLME------RIKE 358 Query: 352 LREMANKAELRALQSKINPHFLFNALNAISSSIR-LNPDTARQLIFNLSRYLRYNIELKD 410 AE + LQS+INPHFL+N L+ + N ++I LS + R ++ Sbjct: 359 EEVAKRTAEFQVLQSQINPHFLYNTLDNLQWRAYDHNALELSEMIEALSDFFRISLS-DG 417 Query: 411 DEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGI 469 E I + KE+ +K Y+ I+Q R+ D L D +V L++QPLVENA+ HGI Sbjct: 418 KEFISVIKEIEHVKSYLFIQQKRYEDILNFTISCDPDVSEYVTIKLIVQPLVENALYHGI 477 Query: 470 QPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN---EMPGNKIGLLNVHHR 526 +P G + + V + ++I V+D G G+ P ++ + + + PG GL N+H R Sbjct: 478 KPKLSHGTIAVRVLRKEDTIQIIVQDDGVGMSPPKLKTLLRSLEQDAPGKGYGLYNIHRR 537 Query: 527 VKLLYGEGLHI---RRLEPGTEIAFYIPNQRT 555 ++++YG+ I + GT IP + Sbjct: 538 IQMVYGKEYGISITSEEQIGTTATIIIPAVKE 569 >UniRef50_B9Y686 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y686_9FIRM Length = 579 Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats. Identities = 74/276 (26%), Positives = 123/276 (44%), Gaps = 21/276 (7%) Query: 297 IHSMLVIPLWEKGVVTGTLKIYY------CHAHQITSSLQEMAVGLSQIISTQLEVSRAE 350 + + + K V GTL YY + S M + +I Sbjct: 310 LKPIRALQGRMKKVEEGTLDAYYTLPGTHDEIDSLGQSYNAMLDEIISLIDKIY------ 363 Query: 351 QLREMANKAELRALQSKINPHFLFNALNAISSSIR-LNPDTARQLIFNLSRYLRYNIELK 409 Q + +AEL+ LQ++I PHFL+N L+ + + D + I +LS Y R + Sbjct: 364 QEQAEKRQAELKVLQAQIKPHFLYNTLDNLKWMAKAQGADEVAKAITSLSTYFRIFLS-N 422 Query: 410 DDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHG 468 E+I + +E + Y+ +++ R+G KL ++ E+ + + +LIQPLVENAI HG Sbjct: 423 GQEKITLAQEFKHTEAYLTMQKIRYGQKLNSTLELAEDARDLPMLKILIQPLVENAINHG 482 Query: 469 IQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEA---NEMPGNKIGLLNVHH 525 ++P + G + +S +R+ I VRD G G+D + + E GL NV Sbjct: 483 LKPKENGGTIQVSARLIEDRLEIQVRDDGVGMDEATLAALREALQKEQMEGHYGLQNVLR 542 Query: 526 RVKLLYGEGLHIRR---LEPGTEIAFYIPNQRTPVA 558 R ++ YGE + L GT + +P + Sbjct: 543 RCRIEYGEKACLSIDSTLGAGTCVTLTLPVSGKEES 578 >UniRef50_C8NE17 Sensor histidine kinase n=2 Tax=Granulicatella RepID=C8NE17_9LACT Length = 563 Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats. Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 22/272 (8%) Query: 296 EIHSMLVIPLWEKGVVTGTLKIYYCHAHQ-----ITSSLQEMAVGLSQIISTQLEVSRAE 350 ++ + + K V G I + +S +M + +++ + Sbjct: 302 QLLPVKQLGRVMKKVEEGDTTIRAQENGAQEFQVLAASFNQMLEKIEKLMQD------EK 355 Query: 351 QLREMANKAELRALQSKINPHFLFNALNAISSSIR-LNPDTARQLIFNLSRYLRYNIELK 409 + + EL+AL S+INPHFL+N L I + ++ LS Y R ++ Sbjct: 356 EQEALTRVYELKALTSQINPHFLYNTLETIIWMAEFQDHKKVVEITKALSNYFRLSLNA- 414 Query: 410 DDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHG 468 +E + +++E+ ++ Y+ I++ R+GDKL D EE+ IP ++IQPLVENAI HG Sbjct: 415 GNELVTLQQEIEHVRQYLFIQKERYGDKLNYRIDFSEEIPPIMIPKIVIQPLVENAIYHG 474 Query: 469 IQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVK 528 I+ G + I++ + + I + D G G+ K + IG+ NV R+K Sbjct: 475 IKEIDRPGQIDITLLKIDEWIEICIADNGVGMSGKE-----TSSKQLGGIGIKNVTERLK 529 Query: 529 LLYGEGLHI---RRLEPGTEIAFYIPNQRTPV 557 L +GE + + T++ IP +R Sbjct: 530 LFFGEAFTMTIDSKSNEYTKVYLRIPIKRQQD 561 >UniRef50_UPI0001789617 integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789617 Length = 574 Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats. Identities = 68/271 (25%), Positives = 131/271 (48%), Gaps = 25/271 (9%) Query: 293 RTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQL 352 + + +P+ V + + M+ + ++I + E Sbjct: 315 GMKRVKQGIFVPIPSHNVAEDETDL-------LIDGFNRMSTQIQELI------GQVETE 361 Query: 353 REMANKAELRALQSKINPHFLFNALNAISSSI-RLNPDTARQLIFNLSRYLRYNIELKDD 411 + +AEL+AL ++INPHF++N+L +I+S +++ +L + LR +I + Sbjct: 362 QARKKEAELQALVAQINPHFIYNSLESINSMAVLQGNKDISKMVISLGKLLRISIS-EHH 420 Query: 412 EQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIP-SLLIQPLVENAIVHGIQ 470 E I + EL ++ Y+ I++ RF +K ++ E+ + L++QP+VENA+ HGI+ Sbjct: 421 ELIPLSMELEHVQHYMRIQKFRFEEKFDYGIELPNELRHYVTQKLIVQPIVENALYHGIE 480 Query: 471 PCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEM------PGNKIGLLNVH 524 P + G+++I V+E G + I V D G G DP+ + ++ ++ N +GL NVH Sbjct: 481 PMEESGLISIKVSENGEDIVIDVEDNGPGFDPETLMKLWNSDPGQLKKYRENGVGLKNVH 540 Query: 525 HRVKLLYGEGLHI---RRLEPGTEIAFYIPN 552 R+++ +G + G+ I IP Sbjct: 541 ERLRIRFGSRYGLMICSSPGYGSLIRIRIPK 571 >UniRef50_C6CT14 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CT14_PAESJ Length = 596 Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats. Identities = 67/273 (24%), Positives = 130/273 (47%), Gaps = 24/273 (8%) Query: 298 HSMLVIPLWEKGVVTGTLKIYYC-----HAHQITSSLQEMAVGLSQIISTQLEVSRAEQL 352 S+ + + V G L + + + + M + ++IS + Sbjct: 328 RSLRQMTDLMRTVRGGNLDVSFDVKQKDEVGILGTEFNRMLRRMKELISEIYVI------ 381 Query: 353 REMANKAELRALQSKINPHFLFNALNAISSSIRLNP-DTARQLIFNLSRYLRYNIELKDD 411 + +A+L ALQS+INPHF++N L I + +N + ++ F L + LRY+I + Sbjct: 382 QSRKKEADLEALQSQINPHFIYNTLETIRMTAEINDDEEVAEMTFTLGKLLRYSIN-RGR 440 Query: 412 EQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQ 470 E +++++EL ++ Y+ + + RF ++ V +DI +E+ N + L QP+VENAI+HG++ Sbjct: 441 ETVELREELQHLERYLQLLRYRFSNRFVVAFDIPQELMNFPVMKLTFQPIVENAILHGME 500 Query: 471 PCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANE-------MPGNKIGLLNV 523 + + +S + +++D G G+D ++ + +GL NV Sbjct: 501 GKPNEVTIRLSAELKEQLLIFSIKDEGAGMDGMTLDLLRQAMNGTRESASSKTGVGLRNV 560 Query: 524 HHRVKLLYGEGLHIRRL---EPGTEIAFYIPNQ 553 + R+KL YGE + GT + +P + Sbjct: 561 NERIKLHYGETYGLEIESKWGEGTTVNLKLPRK 593 >UniRef50_C6IVH0 Histidine kinase internal region n=2 Tax=Bacillales RepID=C6IVH0_9BACL Length = 606 Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats. Identities = 71/290 (24%), Positives = 120/290 (41%), Gaps = 30/290 (10%) Query: 294 TPEIHSMLVIPLWEKGVVTGTLKI-YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQL 352 +P + + G + ++ + S MA+ +I E Sbjct: 310 SPVLKLAKGMRRLSNGELNAHVRTNRKDEFGFLIQSFNRMALVQKHLIEDHYE------Q 363 Query: 353 REMANKAELRALQSKINPHFLFNALNAISSSIRL-NPDTARQLIFNLSRYLRYNIELKDD 411 + ELR LQS+INPHFL+N L++I + + + +++ NLS + R ++ Sbjct: 364 QLRLKTTELRFLQSQINPHFLYNTLDSIYWMAKNYDAEEISEMVMNLSSFFRLSLNKGRQ 423 Query: 412 EQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDE-EVNCCIPSLLIQPLVENAIVHGIQ 470 E +++ + + Y+ I+Q RF D V Y I E + LL+QP+VENAI+HG++ Sbjct: 424 EF-TVEESIAHLNYYLRIQQLRFMDNFQVEYRISEQSKRIPLLKLLLQPIVENAIIHGME 482 Query: 471 PCKGKGVVTISVAECGNR-VRIAVRDTGHGIDPKVIERVEANEMP--------------- 514 + G + IS + I V D G GI+ + + ++ Sbjct: 483 GKEVGGYLVISSWVEQEHTLHIRVEDNGPGIEEERLHYIQQELDRMDLRKIVAYSQDEEQ 542 Query: 515 -GNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRTPVASQ 560 + GL NV R+KL YG + GT + IP + S Sbjct: 543 VKDLFGLRNVLSRMKLYYGPEARLTVQSAPGEGTTVTLSIPLKEGQDESD 592 >UniRef50_B0NX84 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NX84_9CLOT Length = 488 Score = 275 bits (703), Expect = 5e-72, Method: Composition-based stats. Identities = 70/278 (25%), Positives = 134/278 (48%), Gaps = 23/278 (8%) Query: 298 HSMLVIPLWEKGVVTGTLKIYYC-----HAHQITSSLQEMAVGLSQIISTQLEVSRAEQL 352 + + + K V G ++ +T++ + MA + ++I + Sbjct: 218 YPVRQLCEMTKEVAQGNFDVHGPQNTTEELQILTNNFEHMAQKVERLIEDV------KIE 271 Query: 353 REMANKAELRALQSKINPHFLFNALNAISSSI-RLNPDTARQLIFNLSRYLRYNIELKDD 411 ++ K EL+ LQ +INPHFL+N L+ I D +++ LS + R ++ + Sbjct: 272 QQNLRKKELQLLQEQINPHFLYNTLDTIMWLAIDHQDDKVVEMVAALSGFFRTSLSH-GE 330 Query: 412 EQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCC-IPSLLIQPLVENAIVHGIQ 470 ++I I++EL +++Y+ I+Q R+GD + D+ +E+ I + +QPLVENA+ HG++ Sbjct: 331 DKISIREELEHVENYLKIQQLRYGDIMEYSIDVPDEIKKNDIVKITLQPLVENALYHGLK 390 Query: 471 PCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANE------MPGNKIGLLNVH 524 + KG++ IS + N + + V D G G+ P+ + ++ G+ NV+ Sbjct: 391 KQREKGMIKISSVDDENNIFLIVEDNGVGMQPEQVVQINKEMYEDIWVNRTTGFGIANVN 450 Query: 525 HRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRTPVAS 559 R+KL YGE + + GT++ +P R Sbjct: 451 RRIKLYYGEEYGLILESEPDIGTKVIVVVPKTRQAEKK 488 >UniRef50_A6M2F5 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M2F5_CLOB8 Length = 589 Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 71/271 (26%), Positives = 127/271 (46%), Gaps = 22/271 (8%) Query: 297 IHSMLVIPLWEKGVVTGTLKIYYCHA------HQITSSLQEMAVGLSQIISTQLEVSRAE 350 M I + V G L++ H Q+ S M ++ ++ R + Sbjct: 322 YKPMDDIVRKMREVSMGNLEVRMEHDYDGKDFRQLASGFNIMIEEINILM------YRIK 375 Query: 351 QLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDT-ARQLIFNLSRYLRYNIELK 409 + + + EL LQS+I PHFL+N L I + + +++ L+ Y R + + Sbjct: 376 KEQSEIKQIELNRLQSQIKPHFLYNTLECIHWQALSDGNKDVSKMVKALANYYRLCLS-R 434 Query: 410 DDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHG 468 + I I +EL +++Y+ I+ R+ ++DE N IP L +QPL+EN+I HG Sbjct: 435 GKDVIPISQELENVENYLIIQNMRYSGIAECEINVDENFKNVLIPKLTLQPLIENSIYHG 494 Query: 469 IQPCKG-KGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEM---PGNKIGLLNVH 524 I+ G KG + ++ E N++ I+V D G G+ + I+ + ++ GL NVH Sbjct: 495 IRVKDGYKGKILVTAREINNKIVISVADNGVGMRQEQIDEINSSISVFDEKTGYGLRNVH 554 Query: 525 HRVKLLYGEGLHI---RRLEPGTEIAFYIPN 552 R+++L+G G + + GT + +P Sbjct: 555 KRIEILFGSGYGLYYKKNEHGGTTVDIILPK 585 >UniRef50_C6LLN0 Putative sensor histidine kinase n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LLN0_9FIRM Length = 603 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 73/251 (29%), Positives = 128/251 (50%), Gaps = 19/251 (7%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 ++T M + +I+ + ++ E A L+ALQ++INPHFL+N L + Sbjct: 359 DEVGELTDCFNSMLDAIDDLITREYKLKLQE------RDANLQALQNQINPHFLYNTLES 412 Query: 380 ISSSIRLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 I+ +N D +++ +L +++R+ + + D + + +EL +++Y+ I+ R+ + Sbjct: 413 ITMMAEINDDTDVAEMVTDLGKFMRFTLTTR-DAMVRLSEELACVENYVQIQNVRYDHCI 471 Query: 439 TVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTG 497 ++ D E++ + I L IQP+VENAI+HG + I V E + + I + D G Sbjct: 472 SLSVDCPEKLADNRIVKLSIQPVVENAILHGTGGAGSGIHLRIRVREENSDMEILIADDG 531 Query: 498 HGIDPKV-------IERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIA 547 G+DP+ +E+ E E PG IGL NVH R+KL YGE + + GTE+ Sbjct: 532 QGMDPETLAGVIKNLEQGEETERPGQSIGLKNVHQRIKLRYGEKYGLKITSKPGKGTEVR 591 Query: 548 FYIPNQRTPVA 558 +P R Sbjct: 592 LLLPCSREESH 602 >UniRef50_Q9KB25 BH2110 protein n=2 Tax=Bacillus RepID=Q9KB25_BACHD Length = 585 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 73/293 (24%), Positives = 145/293 (49%), Gaps = 12/293 (4%) Query: 278 MNYGKIIIKNNDEAHRTPEIHSMLVIPLWEKGVVTG-TLKIYYCHAHQITSSLQEMAVGL 336 + + ++I ++ + + + + +K ++T+ +M+ + Sbjct: 294 LLFPTLLIVLISKSIHSRLLRVLKHMKRMKKQKFDIINFPGDKDEIGELTNEFNKMSQTI 353 Query: 337 SQIISTQLEVS-RAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPD-TARQL 394 +++I+ + + L+ +A+L ALQS+INPHFLFNAL I + + ++ Sbjct: 354 NRLINEVYASNIEKKDLQLREKQAQLSALQSQINPHFLFNALETIRMRSMIKGEKETAKI 413 Query: 395 IFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIP 453 I N+++ R ++ + + ++ EL I ++ I++ RFGDK+ DIDEE + IP Sbjct: 414 IQNMAKIFRNSLTW-GKDWVTVRDELCLIICFLEIQKYRFGDKMEYELDIDEEAYDYIIP 472 Query: 454 SLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVI----ERVE 509 +++ P VENA +HGI+ K KG++ I V + + + D G G+D + + E ++ Sbjct: 473 NMVFLPFVENASIHGIESVKEKGIIQIRVEKNDGEIVYEISDNGAGMDEEKLASLIETLK 532 Query: 510 ANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRTPVAS 559 E G +G+ NV++R+KL Y R GT + +P ++ ++ Sbjct: 533 NEENMGENVGIKNVYYRLKLHYKNHFDFSINSRPGQGTTVQIKLPAEKNNISK 585 >UniRef50_C6CSY1 Histidine kinase n=2 Tax=Paenibacillus RepID=C6CSY1_PAESJ Length = 600 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 65/285 (22%), Positives = 126/285 (44%), Gaps = 24/285 (8%) Query: 291 AHRTPEIHSMLVIPLWEKGVVTGTLKI----YYCHAHQITSSLQEMAVGLSQIISTQLEV 346 + T I + + Y ++T S M + ++I + Sbjct: 321 QYLTRPIKRLGQAMKKVRNGNFHVTLSQPYRYRDDISELTRSFNFMTEKIRELIEQRY-- 378 Query: 347 SRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI-RLNPDTARQLIFNLSRYLRYN 405 Q++ +A+L ALQ +INPHFL+N L I + ++ +L RY+ Sbjct: 379 ----QMQLRNKEAQLLALQMQINPHFLYNTLQTIGGKAVLIGDYEIPEMCRSLGDLFRYS 434 Query: 406 IELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENA 464 + + + +++EL + +Y+ I+Q RF + L + +D+ E + ++QP++ENA Sbjct: 435 F-YEGNTESTVRQELAHVGNYLYIQQFRFEESLRMEFDVPESLMEASTIRFVMQPIIENA 493 Query: 465 IVHGI-QPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGN------- 516 ++H + P G+ ++ + + ++V D G GI P + + + + Sbjct: 494 VIHALGGPDDGQLLIRVKAETDEGTIVLSVSDNGPGIAPDKLAVLRNDMEKKSMEVFSGV 553 Query: 517 KIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRTPVA 558 IGL NVH R++L YG+ + +L GT I IP ++ + Sbjct: 554 SIGLKNVHERIRLAYGDSYGLELDSKLGEGTVIRIRIPCRKRGES 598 >UniRef50_B9MLE3 Putative sensor with HAMP domain n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MLE3_ANATD Length = 587 Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats. Identities = 70/246 (28%), Positives = 122/246 (49%), Gaps = 10/246 (4%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLRE-MANKAELRALQSKINPHFLFNALN 378 Q+ +++EMA + +I +Q + + L S+INPHF+FN L Sbjct: 343 DEIGQLAENVKEMAKNIKNLIEQVYLAEIQKQQMITKQREIQFEMLCSQINPHFIFNTLE 402 Query: 379 AISSSIRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDK 437 AI + +++ LS LR +I + E I +K+E+ ++ ++ I++ RFGD+ Sbjct: 403 AIRMKAFCSGQEEISHIVYLLSNLLRKSITVSS-ELISLKEEIEFVQQFLEIQKFRFGDR 461 Query: 438 LTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 + IDE++ N I +IQPLVEN+I HGI+P GKG ++I + + ++ I V D Sbjct: 462 IDFDIQIDEDLFNQKILPFIIQPLVENSIKHGIEPKVGKGYISIRIFKRDEKIVIRVEDN 521 Query: 497 GHGIDPKVIER---VEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYI 550 G G+ + + + ++ +GL NV+ R+KL YG GT + + Sbjct: 522 GIGMKKEECDNLITLLKSDQKDAHVGLRNVYTRLKLFYGNEFEFLIKSEYGSGTVVEITV 581 Query: 551 PNQRTP 556 P++ Sbjct: 582 PSKGGE 587 >UniRef50_C2KZS6 Two-component sensor histidine kinase n=1 Tax=Oribacterium sinus F0268 RepID=C2KZS6_9FIRM Length = 563 Score = 271 bits (695), Expect = 4e-71, Method: Composition-based stats. Identities = 70/248 (28%), Positives = 120/248 (48%), Gaps = 16/248 (6%) Query: 318 YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNAL 377 + S M + ++I E + AEL ALQ++INPHFL+N L Sbjct: 322 QKDEIGSLIQSYNFMLGEIKRLIHVVTE------EKMAQKTAELNALQAQINPHFLYNTL 375 Query: 378 NAISSSIR-LNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGD 436 + I+ + D LI L L+Y+I + + +++E+ I++Y+ I++ R + Sbjct: 376 DTINWMLLARGEDDISDLIVRLGELLKYSISG-ANTLVPLQEEVRYIRNYLEIQKCRMEE 434 Query: 437 KLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRD 495 +L I+E N P LL+QPLVENAI HG++P G V I ++I V D Sbjct: 435 RLEYAISIEEACNAYPCPKLLLQPLVENAIKHGLEPLARGGKVCIIAVIDQGELKITVID 494 Query: 496 TGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPN 552 G G++ + I+ + ++ +GL NV R+KL+YG+ + + GT + ++P Sbjct: 495 DGQGMEAEKIQDILLDK----GVGLNNVEKRIKLIYGQSYGLRIHSQKNNGTTVEIHLPL 550 Query: 553 QRTPVASQ 560 + + Sbjct: 551 IVEEIFHE 558 >UniRef50_C5EPF7 Periplasmic sensor signal transduction histidine kinase n=2 Tax=Clostridiales RepID=C5EPF7_9FIRM Length = 494 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 66/253 (26%), Positives = 107/253 (42%), Gaps = 24/253 (9%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 +T S M + ++I Q + EL+ LQ +INPHFL+N L+ Sbjct: 245 DELAILTGSFDHMKGEIGRLIEDI------RQEQNQRRVMELQLLQEQINPHFLYNTLDT 298 Query: 380 ISSSIRLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 I + ++ +LS + R + + I IK+E+ I+ Y+ I++ R+ D L Sbjct: 299 IVWLAEGGQNREVVDMVTSLSEFFRTTLSG-GKDFITIKEEMGHIESYLQIQKIRYQDIL 357 Query: 439 TVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTG 497 +DE + I L +QPLVENA+ HGI+ +G+G + + + +RD G Sbjct: 358 DYEVTLDESLEEYRILKLTLQPLVENALYHGIKNKRGRGHIWVRGYARDDMAVFEIRDDG 417 Query: 498 HGIDPKVIERVEANEMPG------------NKIGLLNVHHRVKLLYGEGLHI---RRLEP 542 G+ + +E V+ G GL NV R++L YG + Sbjct: 418 AGMTQEEMEAVQRKLKGGDRPSDRNGSASKGGFGLFNVAERLRLNYGGRCSLEFHSVQGE 477 Query: 543 GTEIAFYIPNQRT 555 GT IP Sbjct: 478 GTTALVCIPLDME 490 >UniRef50_B1R1H8 Two-component sensor histidine kinase YesM n=2 Tax=Clostridium butyricum RepID=B1R1H8_CLOBU Length = 597 Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats. Identities = 75/263 (28%), Positives = 130/263 (49%), Gaps = 14/263 (5%) Query: 303 IPLWEKGVVTGTLKIY-YCHAHQITSSLQEMAVGLSQIISTQLEVS-RAEQLREMANKAE 360 + G + + KIY Q+ L++M + +I + E+L+ +AE Sbjct: 332 MRRVVNGDLYVSDKIYGNDEIGQLHIDLKKMVESIRNLIDRVYKQEVNEEKLKASQREAE 391 Query: 361 LRALQSKINPHFLFNALNAISSSIRLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKE 419 + L ++INPHFL+N L I L D ++ L + +R N+E+ + + E Sbjct: 392 FKMLSNQINPHFLYNTLETIRMKALLKGDKETSDIVKKLGKIMRRNLEVSGKP-VTLDSE 450 Query: 420 LYQIKDYIAIEQARFGDKLTVIYDIDEEVN---CCIPSLLIQPLVENAIVHGIQPCKGKG 476 + I++Y+ I+ RF + ID+E+N I LL+QP+VENA VHG++ K KG Sbjct: 451 VELIRNYLEIQSMRFEGMVKFEIIIDDEINAKEYMILPLLLQPVVENAFVHGLEEKKEKG 510 Query: 477 VVTISVAECGNRVRIAVRDTGHGIDPKVI----ERVEANEMPGNKIGLLNVHHRVKLLYG 532 + I++ +C N + I V D G GID + + + + + IG+ NV+ R+K+ YG Sbjct: 511 TILINIYKCNNTINICVEDNGVGIDEEKLIMLNKALHTKQDTSKSIGMRNVNQRIKIYYG 570 Query: 533 EGLHI---RRLEPGTEIAFYIPN 552 + + L+ GT + +P Sbjct: 571 KSYGVYIESVLKVGTRVIITLPY 593 >UniRef50_C6D6B6 Putative sensor with HAMP domain n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D6B6_PAESJ Length = 595 Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats. Identities = 72/272 (26%), Positives = 129/272 (47%), Gaps = 20/272 (7%) Query: 294 TPEIHSMLVIPLWE-KGVVTGTLKIYY-CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQ 351 T + + + +G + + + Q+ ++ M LS++ R + Sbjct: 325 TSPLRMLRSLMRKVERGDLKVSFPVRQWDEVGQLGNAFNMMVSHLSEL------GYRLYE 378 Query: 352 LREMANKAELRALQSKINPHFLFNALNAISSSIRLNPD-TARQLIFNLSRYLRYNIELKD 410 AE+ ALQSKINPHFL+N L +IS + + + NLSR LRY++ + Sbjct: 379 TEIREKDAEIAALQSKINPHFLYNTLGSISMYAEVEGNREVVTMTNNLSRLLRYSLSGR- 437 Query: 411 DEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGI 469 E + ++ EL +K Y+ I++ R+ D++ ++DE + C + L+IQP+VENAI HG+ Sbjct: 438 KETVTLRDELDHVKGYMTIQKMRYDDRIDFRLEVDESLYGCPVIPLMIQPIVENAINHGL 497 Query: 470 QPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMP------GNKIGLLNV 523 G+G + +S + + I + D G G+ + + + + GL+NV Sbjct: 498 DKGIGEGRIQLSCYQEQGMLMIVIEDDGIGMTSEQLSAMRKRMDKIHDLGGTSGNGLMNV 557 Query: 524 HHRVKLLYGEGLHI---RRLEPGTEIAFYIPN 552 H R++L YGE + G ++ +P Sbjct: 558 HRRIRLHYGEQYGLQLESMPFQGLKVILTMPI 589 >UniRef50_C6LBC4 Sensor histidine kinase n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LBC4_9FIRM Length = 605 Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats. Identities = 66/249 (26%), Positives = 120/249 (48%), Gaps = 15/249 (6%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 +I + ++ +I Q E+ +Q + ALQ++INPHFL+N L++ Sbjct: 363 DEVAEIGREFNHLVRRINHLIEQQREMYEQKQKLS------MDALQAQINPHFLYNTLDS 416 Query: 380 ISSSIRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 + + N D + +L LR N+ +++ +++EL ++DY+ ++Q R+ + Sbjct: 417 VRWMAVIQNADNIANTVMSLENLLR-NMAKGSGDKVTLREELSLVQDYVNLQQVRYMEVF 475 Query: 439 TVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTG 497 I ++ EE + I + +QP++ENAIVHGI+P GV+ + G + I++ D G Sbjct: 476 DYICEVPEEYRDYLIVKMTMQPIIENAIVHGIEPTGTYGVIRVYARAEGGALYISIEDNG 535 Query: 498 HGIDPKVIERVEANEMPGN---KIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIP 551 G+D I + + N IG+ NV R+KL+YG + T + +IP Sbjct: 536 MGMDETEIREILKAKKNKNSMSGIGVTNVDERLKLIYGPDYGLIFEGEEGKFTRVTIHIP 595 Query: 552 NQRTPVASQ 560 + S Sbjct: 596 METGKEESD 604 >UniRef50_C6IZN7 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZN7_9BACL Length = 597 Score = 270 bits (692), Expect = 9e-71, Method: Composition-based stats. Identities = 78/280 (27%), Positives = 135/280 (48%), Gaps = 17/280 (6%) Query: 283 IIIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIIST 342 + N + ++ + + L + G Q++ M + +++ Sbjct: 319 SFLTTNRMLRLSRHLNRLALGDLNVVSRIDGN-----DEIGQLSRQFNYMVDSIRRLMDQ 373 Query: 343 QLEV-SRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPD-TARQLIFNLSR 400 +E + L + +L+ + S+INPHFLFNAL +I + L D ++ L + Sbjct: 374 VVEKTEQNNALELAQREIKLKMMASQINPHFLFNALESIRMNAHLKGDKEIANVVRLLGK 433 Query: 401 YLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQP 459 +R N+E+ E +K+EL + Y+ I++ R+ D+LT ID +P L+IQP Sbjct: 434 MMRKNLEV-GRESTPLKEELEMVSSYLEIQKFRYEDRLTYTLSIDPAARSIRVPPLIIQP 492 Query: 460 LVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEA-----NEMP 514 LVENA+VHG++ + V +++ VR++V+D G G+ P+ ++ V E Sbjct: 493 LVENAVVHGVEDKEEGVHVEVNIQRDEGLVRVSVQDNGMGMTPERLDEVMRFISGTKEPE 552 Query: 515 GNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIP 551 +IGL NVH R+ L YGE + GT+I+F IP Sbjct: 553 QGRIGLRNVHQRLVLSYGEEHGLQIVSEYGVGTKISFTIP 592 >UniRef50_UPI0001788F16 integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788F16 Length = 580 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 75/244 (30%), Positives = 122/244 (50%), Gaps = 11/244 (4%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVS-RAEQLREMANKAELRALQSKINPHFLFNALN 378 Q+T M + L +I+ + + L A+L ALQS+INPHFLFNAL Sbjct: 337 DEIGQLTGEFNRMTLQLKSLINDVYVADIQKKNLELQRRHAQLNALQSQINPHFLFNALE 396 Query: 379 AISS-SIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDK 437 I S+ + D ++I N+++ R ++ K + + +K+E+ I ++ I++ RFGDK Sbjct: 397 TIRMRSLMKDEDETARIIHNMAKIFRNSLVWK-KDMVTLKEEVEFIHCFLEIQRYRFGDK 455 Query: 438 LTVIYDID-EEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 + EE + IP + I VENA +HGI+P K G + + V G + ++D Sbjct: 456 IDYSVHAPAEEGHLQIPKMAIVTFVENASIHGIEPLKHGGRIEVRVVREGQSLFCTIQDN 515 Query: 497 GHGIDPKVIERV----EANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFY 549 G G+ + +ER+ E + G +IG+ NV +R+KL YG GT + Sbjct: 516 GAGMPAEKVERIYRYLETEDEMGERIGIQNVIYRLKLYYGSRFRFEIDSSPGQGTRVKLS 575 Query: 550 IPNQ 553 IP + Sbjct: 576 IPIE 579 >UniRef50_A5ZVU7 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZVU7_9FIRM Length = 425 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 65/246 (26%), Positives = 117/246 (47%), Gaps = 15/246 (6%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 + +S + M ++++I + + EL+ALQ++INPHFL+N L+ Sbjct: 189 DEVGILVNSFRNMMDEINRLIDEVYVN------KIALKEYELKALQAQINPHFLYNTLSM 242 Query: 380 ISSSI-RLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 ++ R N ++ LS + R + K ++ + ++ + ++ Y+ I+ Sbjct: 243 MNWMAIRSNQMEISKVTLALSTFYRTALS-KGEDVVTVENCIQNMEAYLEIQLTMHDHNF 301 Query: 439 TVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGK-GVVTISVAECGNRVRIAVRDT 496 +V +DID + N +P LL+QP+VENAI HG+ + + +S G+ V I VRD Sbjct: 302 SVDWDIDPTIKNEKMPKLLLQPVVENAIEHGLDEKEDGDKKIFLSFKGKGDDVEITVRDN 361 Query: 497 GHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQ 553 G G++ + E + + GL NV+ R++LLYGE I + GT + P + Sbjct: 362 GLGMEQEKAETLVTYQAK--GYGLKNVNDRIRLLYGENYGIHIFSSPDEGTTVIMKFPKE 419 Query: 554 RTPVAS 559 Sbjct: 420 GRENEE 425 >UniRef50_UPI0001788A19 integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788A19 Length = 610 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 76/277 (27%), Positives = 133/277 (48%), Gaps = 27/277 (9%) Query: 300 MLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKA 359 + + L E G ++ + ++ S M + +++ + E +A Sbjct: 340 VRKMRLVELGDFKQSVPVTEDEIGRLGSGFNRMVEEIDRLVHEVYVLGMRE------REA 393 Query: 360 ELRALQSKINPHFLFNALNAISSSIRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKK 418 EL ALQS+I PHF++N L +IS R N + ++ L R +R +E +D I + + Sbjct: 394 ELAALQSQIQPHFIYNTLESISMLARQRNNEDVSEMATALGRLIRSAVE-QDRSLIRLGE 452 Query: 419 ELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGV 477 EL + YI I++ R G +L ++DI+E ++ C +P LL+QPL+ENAI+HGI + G Sbjct: 453 ELETAESYIRIQKMRHGSRLQAMFDIEEGLDDCLVPKLLLQPLIENAIMHGIGDREQGGT 512 Query: 478 VTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMP---------------GNKIGLLN 522 V ++VA + V + VRD G G+ + ++A+ G+ + L N Sbjct: 513 VYVTVARFEDEVLLTVRDDGRGLSEDELAALQASLEEAGDDVAAKTPAMPLRGHGVALKN 572 Query: 523 VHHRVKLLYGEGLHIR---RLEPGTEIAFYIPNQRTP 556 ++ R++L+YG L GT +P + Sbjct: 573 INQRLRLIYGRDCDFEIDGSLGQGTAFTVTLPFAKQE 609 >UniRef50_Q9K6Q0 Two-component sensor histidine kinase n=2 Tax=Bacillus RepID=Q9K6Q0_BACHD Length = 605 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 75/258 (29%), Positives = 118/258 (45%), Gaps = 22/258 (8%) Query: 321 HAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAI 380 +++ + M + +I E ++AEL+ALQS+INPHFLFN L A+ Sbjct: 349 ELNELNDTYNRMVETTNYLIKVVYE------QELTQSRAELKALQSQINPHFLFNTLEAL 402 Query: 381 SSSIRLNPDTARQLIFNLSRYLRYNIEL-KDDEQIDIKKELYQIKDYIAIEQARFGDKLT 439 S+ + +++ L+ RY I K D+ + + +E I+ Y+ I + R+ +L Sbjct: 403 YWSLEEKDEEQAEVVIALAELFRYTISDVKGDDWVALHEEFDHIERYLHIMKLRYDHRLA 462 Query: 440 VIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVA--ECGNRVRIAVRDT 496 ++D + IP LLIQP+VENAI+HGI G V +S V I VRD Sbjct: 463 WEIELDPSLREVQIPKLLIQPVVENAIIHGIGNKVDGGKVQVSAYTSVKQGYVNITVRDD 522 Query: 497 GHGIDPKVIERVEAN-------EMPGNKIGLLNVHHRVKLLYGEGLHIRRL-----EPGT 544 G G+D K +++E + + I L+N+ R+ L Y H GT Sbjct: 523 GQGMDEKTKQKLEHSLETRVGHPEKRSGIALVNIRQRLDLCYASDPHTSIELTSRHGVGT 582 Query: 545 EIAFYIPNQRTPVASQAT 562 + F IP + P Sbjct: 583 TVTFTIPKKEAPSDEATN 600 >UniRef50_C5RG15 Putative sensor with HAMP domain n=1 Tax=Clostridium cellulovorans 743B RepID=C5RG15_CLOCL Length = 599 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 72/274 (26%), Positives = 133/274 (48%), Gaps = 19/274 (6%) Query: 294 TPEIHSMLVIPLWEKGVVTGTLKI-YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQL 352 TP L++ + ++G + K+ Q+ S+ +M + ++I Sbjct: 332 TPIKKLSLLMNIVKQGNFSIKAKVKSTDEVGQLVSTFNDMTTKIEELIEETYVD------ 385 Query: 353 REMANKAELRALQSKINPHFLFNALNAISSSIRLNPD-TARQLIFNLSRYLRYNIELKDD 411 + + ELR LQ++INPHF++N L +I +N D A ++ L + +RY + K Sbjct: 386 KLNQKELELRMLQNQINPHFIYNTLESIRMMCEINDDIEASEMTMALGKIMRYGLSNKLK 445 Query: 412 EQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQ 470 + + +E+ IK Y+ +++ RF + +I+DID + + I L+ QP+VENA+ HG+ Sbjct: 446 -YVTVAQEIDNIKTYVKLQEYRFDNFEELIFDIDPSLYDNEIVKLIFQPIVENAVYHGLS 504 Query: 471 PCKGKGVVTISVAECGN--RVRIAVRDTGHGIDPKVI----ERVEANEMPGNKIGLLNVH 524 + G++ IS + + ++D G G+D + + + N IGL NV+ Sbjct: 505 TLETGGIIIISGYKDTENCDIIFTIKDNGIGMDKDTLSLLNDYINERNESFNSIGLRNVN 564 Query: 525 HRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRT 555 R+KL YGE I + GT + +P ++ Sbjct: 565 MRIKLSYGEKYGITIYSDINEGTTVKIIVPEIKS 598 >UniRef50_UPI0001973B3A histidine kinase n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973B3A Length = 562 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 62/261 (23%), Positives = 116/261 (44%), Gaps = 26/261 (9%) Query: 321 HAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAI 380 + + + M+ ++ ++ + + +E EL+ Q +INPHFL+N L++I Sbjct: 304 EINVLARTFNIMSDEIAGLMD------KTRREQENLRVMELKLRQEQINPHFLYNTLDSI 357 Query: 381 SSSIRLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLT 439 + ++ +LS + R + + + I I +E I+ Y+ I++ R+ D L Sbjct: 358 VWMAEGGNNRQVVEMTSDLSDFFRTVLS-EGHDFITIAEEEQHIRSYLKIQKIRYEDVLD 416 Query: 440 VIYDIDEEVNCCI-PSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGH 498 +++E + + +++QP+VENA+ HGI+ +G G ++I E N + V D G Sbjct: 417 YRIEMEERIRSRVVLKMILQPIVENALYHGIKNKRGGGTISIRGYEDKNGIVFEVEDDGT 476 Query: 499 GIDPKVIERVEANEMPG-----------NKIGLLNVHHRVKLLYGEGLHI---RRLEPGT 544 G+D + + ++ G GL NV R+ + YGE + GT Sbjct: 477 GMDQETLSKLREKIKSGREGREEPVRKSGGFGLSNVAQRLSMYYGESSALVIESEKGVGT 536 Query: 545 EIAFY---IPNQRTPVASQAT 562 + Y IP R T Sbjct: 537 CVKLYLGQIPLSRREDEKSRT 557 >UniRef50_B8I0K8 Histidine kinase n=2 Tax=Clostridium RepID=B8I0K8_CLOCE Length = 488 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 70/277 (25%), Positives = 121/277 (43%), Gaps = 22/277 (7%) Query: 294 TPEIHSMLVIPLWEKG--VVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQ 351 T I ++ + T +T+S M + ++ + Sbjct: 213 TKPIKNLCISTKLVGNGDFTTRVPDSESDEIAMLTTSFNTMIEKIGSLVEDV------KL 266 Query: 352 LREMANKAELRALQSKINPHFLFNALNAISSSIRLNP-DTARQLIFNLSRYLRYNIELKD 410 + K EL+ +Q++INPHFL+N L+ I N ++ LSR+ R + K Sbjct: 267 EQINLRKTELKLMQAQINPHFLYNTLDTIIWLAEGNKTKDVVSMVSALSRFFRIALS-KG 325 Query: 411 DEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGI 469 + I IK+E I+ Y+ I+Q R+ D L +I E + C I L +QP+VENA+ HGI Sbjct: 326 YDYISIKEEEMLIRSYLQIQQYRYQDILEYEINIPEHMEQCSILKLTLQPVVENALYHGI 385 Query: 470 QPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVE--------ANEMPGNKIGLL 521 + +G G + + + + V+D G G++ + +E+++ + N GL Sbjct: 386 KNKRGMGKIVVEGYCEEDTIWFKVKDNGIGMNQQKVEQIKKLFNRPKEKDAPEQNGFGLF 445 Query: 522 NVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRT 555 NV+ R+KL +G + G+E IP Sbjct: 446 NVNERIKLNFGAEYGLDVKSEYGIGSEFTICIPKITE 482 >UniRef50_C5RJF6 Histidine kinase n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJF6_CLOCL Length = 585 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 78/244 (31%), Positives = 132/244 (54%), Gaps = 11/244 (4%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQL-EVSRAEQLREMANKAELRALQSKINPHFLFNALN 378 ++ L +M + +I+ E + EQL E + L S+INPHFL+N L Sbjct: 343 DEIAELYDDLYKMIDSIQLLINQVYVEKIQKEQLASKQKDVEFKMLASQINPHFLYNTLE 402 Query: 379 AISSSIRLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDK 437 I N +++ L++ +R N+E+ D + ++ E+ IK+Y+ I++ RFGD+ Sbjct: 403 TIRMKAYCNEQYEIAEIVKILAKIMRRNLEIN-DNLVSLESEITMIKNYLKIQKFRFGDR 461 Query: 438 LTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 +T +I+ ++ + LL QP+VENA VHG + +G G + I +++ NR+ ++RD Sbjct: 462 ITYDINIECNIDDYYVLPLLFQPVVENAFVHGFEHKQGIGEIKIIISKDENRLIFSIRDN 521 Query: 497 GHGIDPKVIERVEANEM----PGNKIGLLNVHHRVKLLYGEGLHIRR---LEPGTEIAFY 549 G GI P+ +E + A+ G IGL NV+HR+K+ YG+ + LE GTE+ Y Sbjct: 522 GVGISPETLENLRASISNINYKGKSIGLNNVNHRIKIYYGDEYGVEIFSGLEVGTEVKIY 581 Query: 550 IPNQ 553 +P Sbjct: 582 LPIN 585 >UniRef50_B8I617 Histidine kinase n=2 Tax=Clostridium RepID=B8I617_CLOCE Length = 612 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 83/311 (26%), Positives = 143/311 (45%), Gaps = 29/311 (9%) Query: 271 SPTTRQAMNYGKIIIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYY----------- 319 S TRQ ++ I + P + +L + K ++ +I+ Sbjct: 285 SDITRQVIDTYTTGILIALISLVAPVMLMVLFTGNFSKRILFIRTQIHRAASGDLDISPG 344 Query: 320 ----CHAHQITSSLQEMAVGLSQIISTQLEVS-RAEQLREMANKAELRALQSKINPHFLF 374 ++ L +M + +++ E + ++L N+A+ + L S+INPHFLF Sbjct: 345 ISGSDEIAELYKDLIKMIGDMKKLLQENYEHKLQQQKLLTKQNEAQFKMLASQINPHFLF 404 Query: 375 NALNAISSSI-RLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQAR 433 N L +I +I L + +R +EL D+ Q +K EL +++Y+ I++ R Sbjct: 405 NTLESIRMKAFVCGQREIATVIKLLGKSMRSLLELDDNPQ-PLKSELDFVRNYLEIQKFR 463 Query: 434 FGDKLTVIYDIDEEVNCCIPS---LLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVR 490 F +++ D+ + ++ I LLIQP+VENA VHG++ +G G + I V + Sbjct: 464 FAERVDYTIDVQDGIDEKILKVLPLLIQPIVENAFVHGLEQKEGHGRIDIIVNRYNENIM 523 Query: 491 IAVRDTGHGIDPKVIERV-----EANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEP 542 + V+D G G++ + +E V E+ G IGL NV+ R+KL YGE I Sbjct: 524 VIVKDDGLGMEAEKLEEVHCKIKESGGKTGKSIGLSNVNQRIKLYYGESYGIRVDSSPGT 583 Query: 543 GTEIAFYIPNQ 553 GT + P Q Sbjct: 584 GTTVWISFPEQ 594 >UniRef50_C5EUN5 Histidine kinase internal region n=4 Tax=Clostridiales RepID=C5EUN5_9FIRM Length = 587 Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 66/235 (28%), Positives = 108/235 (45%), Gaps = 14/235 (5%) Query: 319 YCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALN 378 + + + M + ++ E + AEL AL S+INPHFL+N L+ Sbjct: 341 FYEVELLAGNYNRMIHRIRGLMDEISEK------EKTLRHAELNALVSQINPHFLYNTLD 394 Query: 379 AISSSIRLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDK 437 I N L +L+ + R ++ + I ++ EL ++ Y+ I++ R+ +K Sbjct: 395 TIVWMAEFNDSSRVIALTKSLAAFFRLSLSG-GRKLITVEDELEHVRQYLYIQKERYEEK 453 Query: 438 LTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 L + D + + +P +++QP+VEN+I HGI+P G G VTI+V E G R+ V D Sbjct: 454 LNYVIDAPGNLLDYTVPKIILQPIVENSIYHGIKPLNGPGQVTITVQEEGERLIFTVTDN 513 Query: 497 GHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAF 548 G G DP + +GL NV R+KL YG + G + Sbjct: 514 GVGYDPAAVTA--DGSPRLGSVGLKNVDERLKLYYGPEYGVTIRSAPGAGCRVRL 566 >UniRef50_UPI0001C353EA YesM n=2 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C353EA Length = 599 Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 60/268 (22%), Positives = 120/268 (44%), Gaps = 14/268 (5%) Query: 299 SMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANK 358 ++ +++ +T + + +I E + + Sbjct: 340 QIVETGDFDQAREFLGTSTQKDEIGLMTQEFKVTLDKIDYLIHENYEK------QFLLKD 393 Query: 359 AELRALQSKINPHFLFNALNAISSSIR-LNPDTARQLIFNLSRYLRYNIELKDDEQIDIK 417 + + LQ++INPHFL+N LN+I+ IR D A ++ L LR + + + + Sbjct: 394 TKYKMLQAQINPHFLYNTLNSINWMIRARKNDEAAEMTVALGTILRSALNK--QQYVAVD 451 Query: 418 KELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGV 477 +EL ++ Y+ I++ R+ ++ + + IP + +QPLVEN+I HG + Sbjct: 452 EELDSLRKYMTIQEYRYRKRVAFSVECEVSGQYLIPHMTLQPLVENSIYHGGEKMLTPCK 511 Query: 478 VTISVAECGNRVRIAVRDTGHGIDPKVIERVE--ANEMPGNKIGLLNVHHRVKLLYGEGL 535 +++++ E G R+ I V D G G+ + +E V E G+ IGL N++ R+K+ + + Sbjct: 512 ISVTIREEGGRITITVSDNGPGMTEEELEAVRTFTAEPKGHGIGLKNIYERLKMAFDQEA 571 Query: 536 HI---RRLEPGTEIAFYIPNQRTPVASQ 560 + GT + IP ++ + Sbjct: 572 YFDISSVPGGGTTVTIKIPKAEVMISDE 599 >UniRef50_A5ZT84 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZT84_9FIRM Length = 601 Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 61/253 (24%), Positives = 120/253 (47%), Gaps = 20/253 (7%) Query: 318 YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNAL 377 Y Q+ S M +++++ + ++ +AEL+ L +I PHFL+N L Sbjct: 352 YKGEIGQLGDSFNAMVEKINELLGVVY------KEQKNKREAELKILHEQIKPHFLYNTL 405 Query: 378 NAISSSIRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGD 436 + I + + L+ LS + R ++ + E I +++E+ +K+Y+ I++ R+ D Sbjct: 406 DTIQWMAKQYHAQDIVDLVLALSGFFRISLS-QGKEFITLEQEVLMVKNYLDIQKVRYED 464 Query: 437 KLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCK-GKGVVTISVA-ECGNRVRIAV 493 +I+E + N + + +QPLVENA+ HGI+ +G + I E + + + V Sbjct: 465 LFEYKTEIEEGLGNYMVLKICLQPLVENALYHGIKESDQDRGTIWIRAFSESEDSIILKV 524 Query: 494 RDTGHGIDPKVIERVEANEMPGNK------IGLLNVHHRVKLLYGEGLHI---RRLEPGT 544 D G G+ + I+++ + + G LNV+ R+K+ YG+ + +R GT Sbjct: 525 EDDGAGMSQERIDQLNSWLKLKERGEEVKAYGTLNVNDRIKIAYGDEYGLHYEKRTGGGT 584 Query: 545 EIAFYIPNQRTPV 557 + + V Sbjct: 585 VAVVRLKRLQKEV 597 >UniRef50_C5EQZ0 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQZ0_9FIRM Length = 572 Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats. Identities = 67/260 (25%), Positives = 124/260 (47%), Gaps = 14/260 (5%) Query: 300 MLVIPLWEKGVVTGTLKIY-YCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANK 358 + + G ++ +++ I S +M ++ + +Q+ EM Sbjct: 319 VNTMKEVRAGEMSAHMEMEGKNEISIIASQFNKMMKQINNQMD------EIKQVSEMKKD 372 Query: 359 AELRALQSKINPHFLFNALNAISSSIRLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIK 417 AE+RAL+++INPHF++N L++I N + +++ ++ LRY I ++ + IK Sbjct: 373 AEIRALEAQINPHFIYNTLDSIHWLAIENGEDEISEMLSEFAQILRYQISGS-NDVVKIK 431 Query: 418 KELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKG 476 +E+ +K Y+ +++ RF D D +E ++C I ++ QPL+ENAI+HG + G Sbjct: 432 EEMEYLKKYLFLQKIRFMDNFEYAIDCEEGILDCHIHKMIFQPLIENAIIHGYANIRHGG 491 Query: 477 VVTISVAECGNR-VRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGL 535 + I + + ++ D G G+ P+ + V IG+ NV R+KL YG+ Sbjct: 492 FLRIKIYHINESGICFSITDNGRGMSPEKVGEVFGEGGSTPSIGVSNVLARLKLYYGDSY 551 Query: 536 HI---RRLEPGTEIAFYIPN 552 + GT I IP Sbjct: 552 RMEVHSEENRGTSIKITIPK 571 >UniRef50_C6D4D1 Putative sensor with HAMP domain n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D4D1_PAESJ Length = 597 Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats. Identities = 70/279 (25%), Positives = 122/279 (43%), Gaps = 24/279 (8%) Query: 298 HSMLVIPLWEKGVVTGTLKI-----YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQL 352 ++ + K V ++ + M + ++I T+ + + Sbjct: 326 RPIIRLTQSMKAVEIQNFEVDIREPRSDEIGTLERRFNSMLSRIKELIQTEYKAT----- 380 Query: 353 REMANKAELRALQSKINPHFLFNALNAISSSIR-LNPDTARQLIFNLSRYLRYNIELKDD 411 A+++A+Q++INPHFL NAL AI N + +S RY I +K D Sbjct: 381 -IEKRTAQVKAMQAQINPHFLHNALQAIGGIALSRNVPEINDHVRAISDLFRYTIRMKSD 439 Query: 412 EQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQ 470 + I EL ++Y+ I++ RF + + D DEE + C IP +QP+VEN VHG++ Sbjct: 440 -LVTIADELEHARNYLQIQKLRFQSMIEIRIDADEECLGCRIPKFSLQPIVENCFVHGLE 498 Query: 471 PCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEA-------NEMPGNKIGLLNV 523 ++I V + + + I + D G GID + + + G +G+ NV Sbjct: 499 GKMDAWTISIRVEKVLDEIEIDIADNGMGIDEARLAEIRRQLSQPADGQENGEGMGISNV 558 Query: 524 HHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRTPVAS 559 + R+KLL+G+ + GT + IP Q + Sbjct: 559 NARIKLLFGDEYGLFISSEWNAGTTVKLLIPAQEEGEKT 597 >UniRef50_UPI0001B9EDED integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9EDED Length = 613 Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats. Identities = 72/274 (26%), Positives = 121/274 (44%), Gaps = 22/274 (8%) Query: 300 MLVIPLWEKGVVTGTLKIY-YCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANK 358 + + +G ++ +++ QI+ +M L Q I Sbjct: 348 IRSMNRIGEGDLSTRIQMSGEDELQQISRRFNDMGDRLEQYIDKMY------TSEIKQKN 401 Query: 359 AELRALQSKINPHFLFNALNAISSSIR-LNPDTARQLIFNLSRYLRYNIELKDDEQIDIK 417 AEL ALQS+INPHFL+N L +I + Q+I++LS + +K + ++ Sbjct: 402 AELVALQSQINPHFLYNTLESIRMKAYFVGAKEVGQMIYSLSVMFKN--MVKKSTMVTVE 459 Query: 418 KELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKG 476 +E+ Y+ + + R+ +L ++D E+ N I LL+QP+VEN IVHG +P + Sbjct: 460 EEIDMCSVYLDLFRIRYEGRLETEIEVDPEIQNLSIIKLLVQPIVENYIVHGFRPLEDNN 519 Query: 477 VVTISVAECGNRVRIAVRDTGHGIDPKVIERVEA--------NEMPGNKIGLLNVHHRVK 528 +++ +RV I V D G GI + ++ + IGL+NVH R+ Sbjct: 520 KISVRAHGTEDRVVITVSDNGTGIPEDKLIQIRQTLDKVLQPPDKGYRSIGLMNVHERIV 579 Query: 529 LLYGEGLHI---RRLEPGTEIAFYIPNQRTPVAS 559 L YG + GTE+ IP R + Sbjct: 580 LNYGSDYGVTICSTEGRGTEVRMEIPKLRKGETT 613 >UniRef50_A7VVZ0 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVZ0_9CLOT Length = 599 Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats. Identities = 72/274 (26%), Positives = 122/274 (44%), Gaps = 20/274 (7%) Query: 300 MLVIPLWEKGVVTGTLKI-YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANK 358 + + + G + + I I+ + EM L+ IS Sbjct: 326 LHSMQQVQAGDFSLQIPIKSKDEIGVISQAFNEMCERLNSYISEVYAA------EIQRKN 379 Query: 359 AELRALQSKINPHFLFNALNAISSSIR-LNPDTARQLIFNLSRYLRYNIELKDDEQIDIK 417 AEL ALQ++I+PHFL+N L++I + + ++I L + LR++ D+ I ++ Sbjct: 380 AELNALQTQIDPHFLYNTLDSIRAKALAAQDEDTGEMIVLLGKLLRWS-SGTTDKFITLE 438 Query: 418 KELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKG 476 EL I Y+ +++ R+ ++L V I +E ++ IP L++QPLVEN I H + KG Sbjct: 439 DELEYIDTYLRLQKYRYEERLEVNIQIPDEYLDDFIPKLILQPLVENVIKHAFADKEDKG 498 Query: 477 VVTISV-AECGNRVRIAVRDTGHGIDPKVIERVEAN------EMPGNKIGLLNVHHRVKL 529 + I + G R+ I + D G GI+ ++ + + IGL NV R+KL Sbjct: 499 FIGIVASEKEGKRLEITIFDNGKGIEKDTLQEICEKLNQQVLQDEFKSIGLQNVQARLKL 558 Query: 530 LYGEGLHI---RRLEPGTEIAFYIPNQRTPVASQ 560 L+GE + GT + P Sbjct: 559 LFGEEYGLMIKSTAGIGTAVKVTFPILTQKDVQD 592 >UniRef50_C7II18 Putative sensor with HAMP domain n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7II18_9CLOT Length = 593 Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats. Identities = 73/277 (26%), Positives = 127/277 (45%), Gaps = 18/277 (6%) Query: 285 IKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQL 344 I + R + + + E + Q++ +M ++++I Sbjct: 314 IFITNRISRPIKKLKVAMKQFGEGDMSVNCSVESQDEIGQLSRDFNKMVQNINELIQRVY 373 Query: 345 EVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNP-DTARQLIFNLSRYLR 403 + + +AEL++L+ +INPHF +N L I+ R+N + + +R Sbjct: 374 D------ETLLKQQAELKSLRMQINPHFFYNTLETINWMARINGVTEIGVVAKAMGELMR 427 Query: 404 YNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVE 462 I + I I EL + +YI+I++ R+ DKL+V DI+EE+ IP L++QP++E Sbjct: 428 LTI--GGSDFIKICDELKSVSNYISIQKYRYDDKLSVSMDINEELYELYIPKLILQPIIE 485 Query: 463 NAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN-----EMPGNK 517 N+IVHGI G + I + V V D G GI P+ ++ + N E Sbjct: 486 NSIVHGILNKASGGHIEIRGRLISDIVEFTVNDNGVGIHPERLKDILENKFDTFEDDHTH 545 Query: 518 IGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIP 551 +G+ NV R+K+ YGE + R+ GT++ P Sbjct: 546 VGVNNVDRRLKIYYGEKYGVQIKSRVGVGTDVIIRFP 582 >UniRef50_A6NTG2 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NTG2_9BACE Length = 576 Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats. Identities = 68/311 (21%), Positives = 139/311 (44%), Gaps = 17/311 (5%) Query: 250 DHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSMLVIPLWEKG 309 + + A+ G N ++ A+ ++ ++ + G Sbjct: 277 EELTAHSAFGTLNQLGAYTLLATVLCAALMLAVLLYAYRQIVRPIAQLQ--YSLGRVMDG 334 Query: 310 VVTGTLKIYY-CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKI 368 + +++ +I + M LS ++ + ++ AEL LQ++I Sbjct: 335 HLDEHIEVRRQDEFGRIQMAFNGMVDQLSTLLESV------KREEREKRLAELDFLQAQI 388 Query: 369 NPHFLFNALNAISSSIRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYI 427 NPHF++N L++I + ++ A +++F S+ LR + + DE I + +EL ++ Y+ Sbjct: 389 NPHFIYNTLSSIRFLLEMDKVQEAGEMVFYFSKLLRQTLS-RSDEFIPLGEELEMLECYV 447 Query: 428 AIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECG 486 +++ R+ + ++D + +P LL+QP+VEN+I HG+ + + + G Sbjct: 448 DLQRLRYPETFRYSCEVDRSLWGNTLPKLLLQPVVENSIFHGVGQ--HQIHIRVRGWLEG 505 Query: 487 NRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRRLE---PG 543 + + + V D G GI +E V ++ N++GL NV R++L YG + G Sbjct: 506 DALILQVEDDGVGISKDKLEHVMNKDLQINRVGLKNVQDRIRLNYGPEYGLTIAGGPSGG 565 Query: 544 TEIAFYIPNQR 554 T + F +P R Sbjct: 566 TVVTFRLPRTR 576 >UniRef50_C4IBC8 Putative two-component sensor kinase YesM n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IBC8_CLOBU Length = 593 Score = 268 bits (685), Expect = 6e-70, Method: Composition-based stats. Identities = 67/252 (26%), Positives = 120/252 (47%), Gaps = 18/252 (7%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 ++ + M +S +I Q + +A AEL+ALQS+INPHFL+N L+ Sbjct: 347 DELGELIENYNYMISKMSGLIEEQYKYGKA------VKNAELKALQSQINPHFLYNTLDM 400 Query: 380 ISSSIRLN-PDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 I+ + +L+++ + ++ K + I E+ + Y+ I+ R+ +++ Sbjct: 401 INWMAYKKRTSEISTAVKSLAKFYKLSLN-KGKDITYISDEINHVSLYVQIQNMRYSNRI 459 Query: 439 TVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKG-KGVVTISVA--ECGNRVRIAVR 494 T+ DID+ + N IP + +QP+VEN+I HGI G++TIS + + I V Sbjct: 460 TLTVDIDKNINNYLIPKITLQPIVENSISHGIFAKGNVSGLITISGYIDMDNDEILIKVS 519 Query: 495 DTGHGIDPKVIERVEANE---MPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAF 548 D G GI+ ++ + + G+ GL N+ R+KLL+G+ + GT + Sbjct: 520 DDGIGIEGDKLQLILSPNQISSKGSGYGLRNIDQRLKLLFGDKFGLSFESIYGCGTTVII 579 Query: 549 YIPNQRTPVASQ 560 IP + Sbjct: 580 KIPLITDDNYND 591 >UniRef50_A9KTC9 Histidine kinase internal region n=3 Tax=cellular organisms RepID=A9KTC9_CLOPH Length = 603 Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats. Identities = 63/270 (23%), Positives = 125/270 (46%), Gaps = 20/270 (7%) Query: 301 LVIPLWEKGVVTGTLKIY-YCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKA 359 + ++ G +++ Y ++T +M V + ++I+ ++ AE ++ Sbjct: 341 RAMEQFKLGDFNQQVEVTAYDEVGEVTECFNQMVVEIKELINNNYVMALAE------KES 394 Query: 360 ELRALQSKINPHFLFNALNAISSSIR-LNPDTARQLIFNLSRYLRYNIELKDDEQIDIKK 418 ELRALQ++INPHFL+N L+++ + + I LS+ R + + + + Sbjct: 395 ELRALQAQINPHFLYNTLDSLYWRALDAGNEEISEDILALSQLFRMVLS-EGKGVTTVAQ 453 Query: 419 ELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGV 477 E + Y+ I++ RF +L I+EE + IP L++QP VENAIVHG + + + Sbjct: 454 EKELLTRYLHIQKMRFSKRLDYKIAIEEEVLEAVIPKLILQPFVENAIVHGFENVGTECL 513 Query: 478 VTISVAECGNRVRIAVRDTGHGIDPKVIERV-------EANEMPGNKIGLLNVHHRVKLL 530 + ++ + N++ + D G G+ + IE + + + NV R++L Sbjct: 514 LLVTGSLSDNQILFCIEDNGAGMTKEQIEAIWNVEDFKRYANQRVGRYAIKNVKERLELK 573 Query: 531 YGEGLHI---RRLEPGTEIAFYIPNQRTPV 557 Y + + GT + IP ++ + Sbjct: 574 YQDNFMLTIESERGKGTTVTIRIPFEKKEI 603 >UniRef50_Q9KBL7 Two-component sensor histidine kinase n=1 Tax=Bacillus halodurans RepID=Q9KBL7_BACHD Length = 597 Score = 267 bits (684), Expect = 7e-70, Method: Composition-based stats. Identities = 86/279 (30%), Positives = 143/279 (51%), Gaps = 17/279 (6%) Query: 283 IIIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIIST 342 + + +H + I+ + L K VV G Q++ +M L +I Sbjct: 316 SWLISKRLSHLSERINQVASGDLKTKIVVDGK-----DEIGQLSVQFNQMVANLRSLIHQ 370 Query: 343 QLEVSRAEQL-REMANKAELRALQSKINPHFLFNALNAISSSIRLNPD-TARQLIFNLSR 400 E +R ++L + N+ +L+ L S+INPHFLFN L +I + + +++ L + Sbjct: 371 VHETNRQKRLLEKSQNEIKLKMLASQINPHFLFNTLESIRMKSHMKGETEIAKVVKQLGK 430 Query: 401 YLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQP 459 +R ++E+ I ++ EL ++ Y+ I+ R+GD+L ID + I L+IQP Sbjct: 431 LMRKSLEVTGHH-IPLRNELDMVRCYLEIQTFRYGDRLHYELYIDPQSEMVEILPLIIQP 489 Query: 460 LVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN-----EMP 514 LVENA++HG++ + G VTIS GN + + V D G G+D + +E ++ E+ Sbjct: 490 LVENAVIHGLERTEDGGTVTISTIVNGNDLTVIVNDDGCGMDEEKLEAIQNMLHHPQEVD 549 Query: 515 GNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYI 550 GNKIGLLNVH R++L YG+ + GT + F I Sbjct: 550 GNKIGLLNVHKRLQLTYGKTSGLIIESAKGKGTCVRFTI 588 >UniRef50_UPI00016C0712 two-component sensor histidine kinase n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0712 Length = 562 Score = 267 bits (683), Expect = 9e-70, Method: Composition-based stats. Identities = 83/281 (29%), Positives = 150/281 (53%), Gaps = 18/281 (6%) Query: 280 YGKIIIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIY-YCHAHQITSSLQEMAVGLSQ 338 G +II + P + +G + L+I + + +M + Q Sbjct: 281 AGLVIIVGVSKQLTRPLRDLANEMYKVGQGNLDSHLEIRTQDEIAXLNHTFNQMVWDMKQ 340 Query: 339 IISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRL-NPDTARQLIFN 397 +I ++ + + AE+R+LQ +INPHFL+N L I+ R+ D + + Sbjct: 341 LIESEY------XQKVLKQNAEIRSLQMQINPHFLYNTLETINWLSRMRGMDDVGDITAS 394 Query: 398 LSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNC-CIPSLL 456 L R +RY++ K + + IK+E+ + DY+ I++ R+GDK++VI+++DEE++ IP LL Sbjct: 395 LGRLMRYSLSKK--KYVQIKEEIQNLIDYVEIQEVRYGDKVSVIFEVDEELDFFYIPKLL 452 Query: 457 IQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGN 516 IQP+VENAIVHGI+ ++ + V + G + I + D G GI ++++++ AN+ Sbjct: 453 IQPMVENAIVHGIEGKVEPSMIWVRVKKVGQXIDIEIEDDGVGIKSEILDKILANKDTKT 512 Query: 517 ----KIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYI 550 IG++NV+ R+++LYG+ + GT+I +I Sbjct: 513 AGHSSIGMMNVNRRIQMLYGKXYGMQIESTEGKGTKIILHI 553 >UniRef50_C6D164 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D164_PAESJ Length = 578 Score = 267 bits (683), Expect = 9e-70, Method: Composition-based stats. Identities = 65/259 (25%), Positives = 116/259 (44%), Gaps = 14/259 (5%) Query: 301 LVIPLWEKGVVTGTLKIY-YCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKA 359 + E + + I+ S M+ L ++I+ + +A Sbjct: 325 RSMRAIEDENFNVNIPVKGNDEIALISRSFNRMSRRLDELINEVYAG------QIKQKEA 378 Query: 360 ELRALQSKINPHFLFNALNAISSSIRLN-PDTARQLIFNLSRYLRYNIELKDDEQIDIKK 418 EL+ALQ++INPHFL+N L+ I R+ + +L+ LS+ R + +EQ + Sbjct: 379 ELKALQAQINPHFLYNTLDTIYWMARMEKAYESSKLVQALSKLFRLALN-SGNEQTTVAS 437 Query: 419 ELYQIKDYIAIEQARFGDKLTVIYDID-EEVNCCIPSLLIQPLVENAIVHGIQPCKGKGV 477 E+ ++ YI I++ RF D + D++ E + C L++QPLVENAI HGI+ G Sbjct: 438 EVEHLRSYILIQEKRFEDCILFDIDVELETLACRTVKLVLQPLVENAIHHGIEKKGKSGT 497 Query: 478 VTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN-EMPGNKIGLLNVHHRVKLLYGEGLH 536 V I++ + + D G G++ I + + G+ NV+ R++L+ G+ Sbjct: 498 VRITIKREDKELVYRITDDGVGVEEADITSLLQQVKDDNRGFGIKNVNDRIQLICGQEFG 557 Query: 537 I---RRLEPGTEIAFYIPN 552 + G + P Sbjct: 558 LAFHTSPGNGMTVIVRQPF 576 >UniRef50_C5EE53 Histidine kinase internal region n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EE53_9FIRM Length = 599 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 74/243 (30%), Positives = 120/243 (49%), Gaps = 17/243 (6%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 ++ + E+ + Q+I E +E +AEL +Q +INPHFL+N L + Sbjct: 363 REIQILSDKINELLSRVRQLIEQVKE------EQEKKREAELSLMQEQINPHFLYNTLYS 416 Query: 380 ISSSIRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 + L+ A ++ LS + R + + ++ I I E+ +K+Y+ I+ ++GDK Sbjct: 417 VQQLCELDESKEASAMVLALSNFFRTGLS-RGEDVITIDTEINHVKNYLVIQHMKYGDKF 475 Query: 439 TVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTG 497 +I ++ +C I L +QPLVENA+ HGIQ GKG++TI+ G R+ VRDTG Sbjct: 476 EYEIEIAPDIRDCRILKLTLQPLVENALHHGIQNQAGKGMITITGKREGGRILFEVRDTG 535 Query: 498 HGIDPKVIERVEANEMPGNKI-----GLLNVHHRVKLLYGEGLHIRRL---EPGTEIAFY 549 G+ + +E+V + GL NV+ R+ L Y + GT I Y Sbjct: 536 AGMASERLEQVRKSMNQEEGYSQVSFGLRNVYSRLMLYYDGEAGLEIESVQGRGTVIKVY 595 Query: 550 IPN 552 IP Sbjct: 596 IPV 598 >UniRef50_C6JC63 Two-component sensor kinase yesM n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC63_9FIRM Length = 599 Score = 266 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 81/290 (27%), Positives = 151/290 (52%), Gaps = 18/290 (6%) Query: 283 IIIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYY-CHAHQITSSLQEMAVGLSQIIS 341 +I+++ P + + +++G ++ +QI +MA + +I Sbjct: 316 VIMRHAARVMVKPTKKLVDSMTAYQEGNFDSRFEVENQDEINQIGMVYNQMADKVQNLIE 375 Query: 342 TQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPD-TARQLIFNLSR 400 + +AE+ L+ +INPHFL+N L+ IS N + L L + Sbjct: 376 KNYTL------EIANREAEIEFLKMQINPHFLYNCLDTISWLGFSNGNSEITDLAVALGK 429 Query: 401 YLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQP 459 +LR +I K ++ +K+E+ + +Y+ I++ RFGDK+ + ++I +E +N IPS +IQP Sbjct: 430 FLRASI--KREDYYTVKQEMEVVDNYLFIQKYRFGDKIEIRHNIPDEVLNFYIPSFIIQP 487 Query: 460 LVENAIVHGIQPCKGKGVVTISVAECGN-RVRIAVRDTGHGIDPKVIERV---EANEMPG 515 ++EN+IVHG++ KG++ I++ C N ++ + D G G+D + +++V +++ Sbjct: 488 VIENSIVHGLEEQIEKGILWINIQLCNNKYLQFNLTDNGKGMDEEQLKQVIQNYSDKNKK 547 Query: 516 NKIGLLNVHHRVKLLYGE--GLHIRRL-EPGTEIAFYIPNQRTPVASQAT 562 + IGL NV+ R+ LLYGE H+ + GTE+ F IP + P Sbjct: 548 SSIGLSNVYRRLNLLYGEACEFHVTSVAGEGTEVTFRIPVMQVPGNHTLN 597 >UniRef50_UPI0001788114 integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788114 Length = 602 Score = 266 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 69/255 (27%), Positives = 125/255 (49%), Gaps = 14/255 (5%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMAN-KAELRALQSKINPHFLFNALN 378 Q++ M ++ +++ E + ++L E + + + + S+INPHFLFNAL Sbjct: 348 DEIGQLSRQFNSMVGNVNDLMNEVQESNEQKRLMEQKQNEIKFKMMASQINPHFLFNALE 407 Query: 379 AISSSIRLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDK 437 +I L + +++ L + +R N+E+ + IK E+ ++ Y+ I++ R+ D+ Sbjct: 408 SIRMEAHLKGETEIARIVRLLGKMMRSNLEV-GSGKTTIKDEIEMVQCYLDIQKFRYEDR 466 Query: 438 LTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 L +D E N IP L+IQPLVENA++HG+ + + + V ++ + D Sbjct: 467 LKYELQVDPEANRVRIPPLIIQPLVENAVIHGMDHKEEGTSIKVRVTASEGKLHVMTEDN 526 Query: 497 GHGIDPKVIERV-----EANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAF 548 G GI ++ + + +E G +IGL NVH R++L YG + GT I F Sbjct: 527 GAGISLDKLQMIYGYLNDTDEKDGGRIGLRNVHVRLQLTYGPEAGLIIYSEPGIGTRIEF 586 Query: 549 YIPNQRTPVASQATL 563 IP + ++ Sbjct: 587 SIP--TGGESDDESV 599 >UniRef50_C6J594 Histidine kinase internal region n=2 Tax=Bacillales RepID=C6J594_9BACL Length = 586 Score = 266 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 77/249 (30%), Positives = 126/249 (50%), Gaps = 24/249 (9%) Query: 321 HAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAI 380 +++ +S +M ++++I E + ++ EL+ALQ++INPHFLFN L A Sbjct: 337 EINELNNSYNQMVDNMNELIRVVYEK------ELLQSRTELKALQAQINPHFLFNTLEAF 390 Query: 381 SSSIR-LNPDTARQLIFNLSRYLRYNIEL-KDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 S+ + L+ +S RY I DE + I+ EL ++ Y+ + R ++L Sbjct: 391 YWSLEDKGEEELANLVVGMSNLFRYIISSPNQDEWVTIEDELEHVERYLQLMTIRLAERL 450 Query: 439 TVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVA--ECGNRVRIAVRDT 496 T D E + IP LLIQPLVENAI+HG++ G+G V++ V + V+I VRD Sbjct: 451 TWSIDAGEFRHVKIPKLLIQPLVENAILHGVEKQLGQGKVSVCVESSDKEGYVKITVRDN 510 Query: 497 GHGIDPKVIERVEANEM-------PGNKIGLLNVHHRVKLLY----GEGLHI---RRLEP 542 G G+D + + + G +G++NV R++L Y G+ + R Sbjct: 511 GPGMDEETLNGLLQAMEGGPSISSKGTGVGIVNVQRRLRLYYDEEQGKKHGLQVTSRPGE 570 Query: 543 GTEIAFYIP 551 GT ++F IP Sbjct: 571 GTSVSFEIP 579 >UniRef50_C6IXH6 Histidine kinase internal region n=2 Tax=Bacillales RepID=C6IXH6_9BACL Length = 598 Score = 266 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 80/245 (32%), Positives = 130/245 (53%), Gaps = 11/245 (4%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMAN-KAELRALQSKINPHFLFNALN 378 + + M ++ +I+ ++ ++ E +AEL LQS++NPHFLFN LN Sbjct: 349 DEIGGLIRNFNMMTARINALINNVYKLEIQQKSLEAERVRAELNFLQSQMNPHFLFNTLN 408 Query: 379 AISSSI-RLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDK 437 AI + N +I NLS+ LR + K ++ + +++E+ I Y+ IE+ RF DK Sbjct: 409 AILVVCTKKNYSDVTDIIKNLSKLLRRLLRWK-EDLVTLEEEIRFIDMYLKIEKFRFRDK 467 Query: 438 LTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 ++DI+E ++ IP + IQPLVENA HGIQ +G G+VT+ R+RI + D Sbjct: 468 FEYVFDIEEAALHYTIPKMSIQPLVENACKHGIQAVQGNGLVTVKARVEDGRLRIVISDN 527 Query: 497 GHGIDPKVIERV----EANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFY 549 G GI P+ + + + GN IG+ NV+ R +L Y + + + GT++ Sbjct: 528 GKGIKPEQLREMLLTVRSENTSGNSIGIRNVYRRFELYYNDQVRFNIDSKPGQGTKVCIE 587 Query: 550 IPNQR 554 IP +R Sbjct: 588 IPVKR 592 >UniRef50_C4G6T4 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G6T4_ABIDE Length = 593 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 70/253 (27%), Positives = 123/253 (48%), Gaps = 20/253 (7%) Query: 318 YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNAL 377 ++ + +++++ Q + + E + LQS++NPHFL+N L Sbjct: 340 RCDEIGKLNRIFNKAIKEINELMQKV------TQSEILNKEMEFKTLQSQMNPHFLYNTL 393 Query: 378 NAISSSIRLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGD 436 +AI+ L+ +S +R +I K I I++EL +K+YI I+ R+ D Sbjct: 394 DAINWLAFKEKQTEICNLVAAISSLIRASISNK-KSIITIEQELDYVKNYIYIQHIRYKD 452 Query: 437 KLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRD 495 + IYDIDE + +P L+IQP+VENAI+HGI+ K K ++ IS+ + I V+D Sbjct: 453 RFDTIYDIDESLLKQAVPKLIIQPIVENAIIHGIENSKNKNLLYISIKRENECIVIIVKD 512 Query: 496 TGHGIDPKVIERVEANEMPGNK--------IGLLNVHHRVKLLYGEGLHI---RRLEPGT 544 TG G+ + + + + +GL VH R++L+YG+ + + GT Sbjct: 513 TGIGMTDEKVSELLKEPLNAEGDEQKAHTNLGLYAVHKRIQLMYGDLYGLAVHSQAGEGT 572 Query: 545 EIAFYIPNQRTPV 557 + +IP + Sbjct: 573 TVTLHIPFAKKQE 585 >UniRef50_A5ZM24 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZM24_9FIRM Length = 618 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 64/278 (23%), Positives = 126/278 (45%), Gaps = 19/278 (6%) Query: 296 EIHSMLVIPLWEKGVVTGTLKI--YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLR 353 I S++ + + Y+ + + M + Q+++ Q + + Sbjct: 341 RISSVIHQMSKVRKGTLSPMDSPEYHDEIGDLIDTYNYMTRKMDQLMTDQAKAAE----- 395 Query: 354 EMANKAELRALQSKINPHFLFNALNAISSSIRLN-PDTARQLIFNLSRYLRYNIELKDDE 412 AE R+LQ++INPHFL+N ++ I+ + D + + +LSR+ + + K Sbjct: 396 -ELRIAEFRSLQAQINPHFLYNTMDMINWLAQQGRTDEVSRAVQSLSRFYKLTLSRK-QS 453 Query: 413 QIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQP 471 I +E + Y+ I+ R+ D +T + DI +E+ IP L +QP++EN+++HGI Sbjct: 454 ISTIYREAEHVSIYLQIQNMRYHDSITFVSDIPDELMEYQIPKLTLQPIIENSVLHGILE 513 Query: 472 CKGK-GVVTISVAECGNRVRIAVRDTGHGIDPKVIERVE----ANEMPGNKIGLLNVHHR 526 K G + ++ + + + + D G GI + + + A+ G I + N H R Sbjct: 514 TADKTGTIVLTGWMEDSDIVLLISDDGIGIAAEQLATILSGEGASSSGGTNIAVYNTHRR 573 Query: 527 VKLLYGEGLHI---RRLEPGTEIAFYIPNQRTPVASQA 561 +++LYG + GTE+ IP ++ + Sbjct: 574 LQILYGSDYGLSYTSNPGQGTEVEIRIPARKHSATLDS 611 >UniRef50_A8RTG8 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RTG8_9CLOT Length = 625 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 65/253 (25%), Positives = 121/253 (47%), Gaps = 26/253 (10%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 ++ + M + ++ +Q ++ + AE RALQ++INPHFL+N L+ Sbjct: 375 DEIGVLSDTYNYMTEEIITLMDSQ------KKASDELRMAEFRALQAQINPHFLYNTLDM 428 Query: 380 ISSSIRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 I+ + + + + LSR+ + + + + I+KEL + Y+ ++ R+ + + Sbjct: 429 INWLSQTGQSEKVTEAVQILSRFYKLTLSRR-ELMNSIEKELEHVSLYVRLQNMRYDNCV 487 Query: 439 TVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKG-KGVVTISVAECGNRVRIAVRDT 496 + D+ EE+ IP L QP+VENA +HGI + KG + ++ G+ + + D Sbjct: 488 AFVVDVPEELCEYTIPKLTFQPIVENAFLHGIMMKEEKKGSILLTGWPEGDDIVFIISDD 547 Query: 497 GHGIDPKVIERVEANEMPGNK-------------IGLLNVHHRVKLLYGEGLHIRR---L 540 G GI P+ ++ ++ + G IG+ N + R+K LYGE + L Sbjct: 548 GAGIPPETLDTLKDDVNAGTGSSASPRHTAFSGHIGIYNTNLRLKSLYGESYGLSITSTL 607 Query: 541 EPGTEIAFYIPNQ 553 GTE+ IP + Sbjct: 608 GKGTEVTVRIPAR 620 >UniRef50_C6D353 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D353_PAESJ Length = 586 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 73/244 (29%), Positives = 121/244 (49%), Gaps = 14/244 (5%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 A Q+ + + M + ++I+ + E +ALQ++INPHFL+N L + Sbjct: 348 DEAGQLQRNFRMMVGRIDELINENYVK------QLTIKDTEFKALQAQINPHFLYNTLES 401 Query: 380 ISSSIRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 I+ S ++ ++ +L LR I K + ++ EL + YIAI+ RF ++L Sbjct: 402 INWSAKIAGHKQISIMVESLGYLLRSTISHK-QPTVTLEDELRLVGHYIAIQHIRFEERL 460 Query: 439 TVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTG 497 I + +N +P L +QPLVENAI +G++ V+TI+ E + I V D G Sbjct: 461 VFENRIPDRLLNMYVPKLSLQPLVENAIHYGLEQMIEACVITITAEEHEGGIAITVADNG 520 Query: 498 HGIDPKVIERVEAN--EMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPN 552 G+ P VI+++ + E G IGL N+ R+K+L+GE I + T I Y+P Sbjct: 521 PGLAPDVIDQLRSGEIEPRGTGIGLRNIEDRIKMLFGEAYGIRVESVPQQDTRITLYLPI 580 Query: 553 QRTP 556 + Sbjct: 581 EMGE 584 >UniRef50_C6IYJ6 Predicted protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IYJ6_9BACL Length = 612 Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats. Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 19/252 (7%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 + M L Q+I R + ++ +A +ALQ++INPHFLFN LN+ Sbjct: 359 DEIAIVGKHYNRMLTRLQQLID------RLSKEQQRKEEARFQALQAQINPHFLFNTLNS 412 Query: 380 ISSS-IRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 I + ++I NL R L Y ++ + E + +++EL +K Y+ +++ RF D + Sbjct: 413 IKWMAALSGAEHVGKMITNLGRLLEYTMKTQ-QEVVTLEEELTYLKVYLDLQKIRFHDNV 471 Query: 439 TVIYDIDEEVNC-CIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTG 497 D+ +E+ I +QP+VENAI+HG + + I E + + V D G Sbjct: 472 QFEVDVPDELRSNAILKFTLQPIVENAIIHG---GRTPLAIGIQGEETEQGLVLTVSDNG 528 Query: 498 HGIDPKVIER----VEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYI 550 GI ++ + + + IG+ NV+ R+KL +G+ + + GT + + Sbjct: 529 VGIAEAKLKELSSQLNQDHSRYSGIGIYNVNERIKLHFGQDFGLEMSSMIGQGTRVKIRL 588 Query: 551 PNQRTPVASQAT 562 P + Sbjct: 589 PRLDRQALADQN 600 >UniRef50_UPI0001787F84 integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787F84 Length = 598 Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats. Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 15/272 (5%) Query: 290 EAHRTPEIHSMLVIPLWEKGVVTGTLKIY-YCHAHQITSSLQEMAVGLSQIISTQLEVSR 348 +P +L I G +K+ + M + Q+I Sbjct: 331 MRITSPVRKLLLAIKRVGGGDFNAKIKVEGKDELGHVLMKFNSMNEKVRQLIEENYVAKL 390 Query: 349 AEQLREMANKAELRALQSKINPHFLFNALNAISSSI-RLNPDTARQLIFNLSRYLRYNIE 407 E + E+ AL ++NPHFL+N LN I+ + +++ +LSR L Y + Sbjct: 391 RE------RETEILALGIQLNPHFLYNTLNIINWMAVYGEKEQVSRMLVSLSRMLHYTTD 444 Query: 408 LKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIV 466 + D + +++ ++DYI I RF + V +DI+ E+ +P L +QPLVENAI+ Sbjct: 445 NRKDSM-PLSEDIGWLQDYIVIMSNRFEHRFRVDFDIEPELMKARVPKLFLQPLVENAII 503 Query: 467 HGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHR 526 HG + + G++TI G+ + V D G G +P+ ++ A + IG+ NV R Sbjct: 504 HGFRDMESGGLITIYGRSLGDDIEFCVEDNGCGFEPERLKEALAENA--SHIGIHNVDKR 561 Query: 527 VKLLYGEGLHI---RRLEPGTEIAFYIPNQRT 555 +KLLYG+ I E GT + IP+ + Sbjct: 562 IKLLYGDRYGIGIESVPELGTRVKLVIPHHKA 593 >UniRef50_A6LST6 Histidine kinase internal region n=4 Tax=Clostridium RepID=A6LST6_CLOB8 Length = 596 Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats. Identities = 72/266 (27%), Positives = 127/266 (47%), Gaps = 18/266 (6%) Query: 300 MLVIPLWEKGVVTGTLKIY-YCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANK 358 + V+P G + + +++++ M GL+ + Q+ ++++ K Sbjct: 335 VKVMPKIIHGDFNNHIPVVGSYEVRELSANFNYMLDGLNNYVHAQI------KMQKEKRK 388 Query: 359 AELRALQSKINPHFLFNALNAISSSIRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIK 417 AEL ALQ +INPHF++N L +I + + + Q I LR I K +E I I+ Sbjct: 389 AELHALQMQINPHFIYNTLASIKWLMWQGSTEKSIQTIDAFISLLRNTISNK-NEMITIQ 447 Query: 418 KELYQIKDYIAIEQARFGDKLTVIYDI-DEEVNCCIPSLLIQPLVENAIVHGIQPCKGKG 476 +E+ + +Y+ I R+GD + V + + N IP L++QP +ENA HG + G Sbjct: 448 EEIENLNNYVLINHIRYGDNINVNFFVMPNRENYIIPKLILQPFIENAFFHGF-NERNNG 506 Query: 477 VVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPG----NKIGLLNVHHRVKLLYG 532 + + V E + + D G G+ + ++++ + IG+ NV+ R+KLLYG Sbjct: 507 SIHVFVNEQKQNLICEIIDNGVGMTAEEVKKILNDSSKKHEHFTSIGIQNVNDRIKLLYG 566 Query: 533 EGLHI---RRLEPGTEIAFYIPNQRT 555 + I L GT + IP Q+ Sbjct: 567 DDYGISISSELGKGTTVRVTIPAQKE 592 >UniRef50_UPI0001788487 integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788487 Length = 577 Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats. Identities = 65/247 (26%), Positives = 125/247 (50%), Gaps = 14/247 (5%) Query: 313 GTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHF 372 + + + + M ++ +I+ R + + E +ALQ++INPHF Sbjct: 338 DAAPVAMNELGLLHRTFRLMIERINALITENYSN------RLLIKETEFKALQAQINPHF 391 Query: 373 LFNALNAISSSIRLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQ 431 L+N L +++ ++N ++ L+ LR ++ LK + + + +EL +++Y+ I++ Sbjct: 392 LYNTLESVNWLAKMNKQSQISDMVQALAFLLRNSVSLK-EPILTLGEELEIVRNYVIIQK 450 Query: 432 ARFGDKLTVIYDIDE-EVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVR 490 RF D+L D+ E +++ IP L +QPL+ENAI + ++P +T+S E + Sbjct: 451 FRFEDRLHFTLDVQEQDLHRKIPKLSLQPLLENAIHYALEPSVDPCRITLSCTETPSAFC 510 Query: 491 IAVRDTGHGIDPKVIERVEANE--MPGNKIGLLNVHHRVKLLYGEGLHIRR---LEPGTE 545 + V D G G+ P + R+ + + GN IGLLN+ R+KL +G+ + GT Sbjct: 511 VIVEDDGPGMAPDTLTRLRSGDLATSGNGIGLLNIEERIKLAFGDHYGLSIDSGPGLGTR 570 Query: 546 IAFYIPN 552 + +P Sbjct: 571 VILSLPK 577 >UniRef50_A5ZVI8 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZVI8_9FIRM Length = 478 Score = 265 bits (677), Expect = 5e-69, Method: Composition-based stats. Identities = 74/266 (27%), Positives = 128/266 (48%), Gaps = 19/266 (7%) Query: 297 IHSMLVIPLWEKGVVTGTLKI-----YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQ 351 I + + K V G + ++ + +MA +S ++ Q Sbjct: 212 IRPVTEMLDKVKKVGRGNFDVLPVSAEIVEIEELDQGINKMAHRISGLLENV------RQ 265 Query: 352 LREMANKAELRALQSKINPHFLFNALNAISSSIRLN-PDTARQLIFNLSRYLRYNIELKD 410 +EM + EL+ +Q+++NPHFL+N L+ I I D A ++I +LS + R ++ K Sbjct: 266 EKEMQHLTELQLIQAQVNPHFLYNTLDTIVWLIEGGMTDDAVEMISSLSIFFRTSLS-KG 324 Query: 411 DEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGI 469 ++ I + +E Y+ I+Q R+ D L I +E++ +P L IQPL ENA+ HGI Sbjct: 325 NDIIPLSEEKRHTLSYLEIQQFRYRDILEFELSIPKELDGIQVPKLSIQPLAENALYHGI 384 Query: 470 QPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGN--KIGLLNVHHRV 527 + +GKG +TI+ E + + + V D G G+ P+ + V+ + G GL V R+ Sbjct: 385 KNRRGKGKITITGREEADAIVLTVSDNGQGMTPERLHEVQESIRTGERAGFGLAAVAERI 444 Query: 528 KLLYGEGLHI---RRLEPGTEIAFYI 550 L YG G + + GT + + Sbjct: 445 ALYYGPGYGMTISSKEGEGTTVELRL 470 >UniRef50_C5EWK9 Histidine kinase internal region n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EWK9_9FIRM Length = 622 Score = 265 bits (677), Expect = 5e-69, Method: Composition-based stats. Identities = 65/271 (23%), Positives = 132/271 (48%), Gaps = 20/271 (7%) Query: 297 IHSMLVIPLWEKGVVTGTLKIYYC-------HAHQITSSLQEMAVGLSQIISTQLEVSRA 349 I + I V G + +I S M L + + + R Sbjct: 355 IKPVDKIKDKMSQVAEGRFDVRISSQERGKGEFAEIADSFNYMVDRLEKQVEEIRAMDRK 414 Query: 350 EQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNP-DTARQLIFNLSRYLRYNIEL 408 + L EL LQ++INPHF++N L++I + + + A ++ + S+ LR + Sbjct: 415 KHL------LELDFLQAQINPHFIYNTLSSIRFYVEMGKNEEAEDMLIDFSKILRKTLS- 467 Query: 409 KDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVH 467 + ++ I +++E+ ++ Y+ +++AR+ +++ V++D++E + +P ++QP+VENAI + Sbjct: 468 RTEQFITLREEMETLRHYVNLQKARYRERVEVVFDVEESTLPALVPDFILQPIVENAIFY 527 Query: 468 GIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRV 527 ++ + I + ++V+D G G+D + I V +M NK+G+ NV+ R+ Sbjct: 528 SLKE-DKVCHIRIKSYMDQGNLCVSVKDDGVGMDAEKISTVLNKDMNINKVGIKNVNERL 586 Query: 528 KLLYGEGLH---IRRLEPGTEIAFYIPNQRT 555 KL +G+ I GTE+ +P+ Sbjct: 587 KLNFGDVYGLKIISEEGRGTEVILVMPSTTE 617 >UniRef50_C6D6I3 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D6I3_PAESJ Length = 578 Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats. Identities = 68/263 (25%), Positives = 130/263 (49%), Gaps = 15/263 (5%) Query: 296 EIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREM 355 + + + + + ++ Q+ S M + +++ Q ++ + Sbjct: 322 YLLMNKMSQVRQGRLNELDIRPSKDEVGQLILSYNYMINSVQELMVEQYKLGQ------E 375 Query: 356 ANKAELRALQSKINPHFLFNALNAISSSIRLNP-DTARQLIFNLSRYLRYNIELKDDEQI 414 +AEL+ALQS+INPHFL+N L+ ++ + D +Q+I+ LS Y + + K ++ + Sbjct: 376 KTQAELKALQSQINPHFLYNTLDMLNWMAQKEERDNIQQIIYALSDYYKLILN-KGNDFV 434 Query: 415 DIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCK 473 +K EL Y+ I++ RF +++ + +++E ++C +P + IQPLVENAI+HGI Sbjct: 435 TVKDELRLSSIYMEIQKKRFKNRVQLEVEVEESVMDCMLPKITIQPLVENAILHGISENP 494 Query: 474 GK-GVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYG 532 G G + I+ +R+ IA+ D G G+ + E G+ GL N+ R+ L +G Sbjct: 495 GGRGTIRITGYRDQDRLMIAICDDGVGMPEE--GSGEERRHRGSGYGLSNIRKRLDLYFG 552 Query: 533 EGLHI---RRLEPGTEIAFYIPN 552 + + GT + +P Sbjct: 553 QTAELQLHSTPGEGTCVTINVPV 575 >UniRef50_C6JD26 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD26_9FIRM Length = 599 Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats. Identities = 61/245 (24%), Positives = 115/245 (46%), Gaps = 16/245 (6%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 ++ M + ++ + + + ALQS+I PHFL+N L Sbjct: 349 EDFTKLAIGFNSMMDEIEVLMEQV------KLEQHQLEQIRFNALQSQIQPHFLYNTLEC 402 Query: 380 ISS-SIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 I +I ++ L++Y R + K + I I++E+ I++Y+ I+ R+ + + Sbjct: 403 IHWQAIAEGNKEISTMVKALAKYYRICLS-KGHDVITIREEVEHIRNYMIIQNMRYDNII 461 Query: 439 TVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGK-GVVTISVAECGNRVRIAVRDT 496 ++ +V IP L +QPLVEN+I HG++ +GK G + ++ + + V I V DT Sbjct: 462 GSEIVVESQVEESLIPKLTLQPLVENSIYHGMKVKEGKTGTLYLTAYKNEDEVIIKVSDT 521 Query: 497 GHGIDPKVIERVEANE---MPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYI 550 G G+ + I+ + G+ NV+ R++LL+GEG + + G + ++ Sbjct: 522 GTGMSQEQIDEMNEQLSRYEDSFGYGVRNVNKRIELLFGEGYGLNYQKNDSGGVTVVIHL 581 Query: 551 PNQRT 555 P Q Sbjct: 582 PYQTE 586 >UniRef50_C6IWB4 Histidine kinase internal region n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWB4_9BACL Length = 601 Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats. Identities = 76/247 (30%), Positives = 133/247 (53%), Gaps = 14/247 (5%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQ-LREMANKAELRALQSKINPHFLFNALN 378 Q++ + LSQ++ E +R ++ L + ++ +L+ L S+INPHFLFN L Sbjct: 346 DEIGQLSQRFNALVGRLSQLMKEMDEANRQKRKLEQRQSEIKLKMLASQINPHFLFNTLE 405 Query: 379 AISSSIRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDK 437 +I L + I+ LS +R +E+ + + I + +EL +K Y+ +++ R+ D+ Sbjct: 406 SIRMEAHLRGEEEIAHAIWQLSALIRNGLEVDNGK-ISLSRELDMVKCYLELQKFRYEDR 464 Query: 438 LTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKG-VVTISVA-ECGNRVRIAVR 494 L +++ + IP L+IQPLVEN+I+HG++ + + I + RV + + Sbjct: 465 LNYKLEVEPGIEEIEIPPLIIQPLVENSILHGLEQKEEGATTILIRAYFDDNGRVCVNIF 524 Query: 495 DTGHGIDPKVIERVEA-----NEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEI 546 D G GI PK ++ + E G +IGL NVH R+KL+YG+G + + GT+I Sbjct: 525 DDGAGIAPKRLQELNRMLNEPEEEAGQRIGLRNVHDRLKLIYGDGAGLTIGSQEGEGTQI 584 Query: 547 AFYIPNQ 553 +F IP + Sbjct: 585 SFCIPKE 591 >UniRef50_A4XJ72 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XJ72_CALS8 Length = 583 Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats. Identities = 79/242 (32%), Positives = 126/242 (52%), Gaps = 9/242 (3%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMA-NKAELRALQSKINPHFLFNALN 378 Q+T +++ MA + +I +Q + + L S+INPHFLFN L Sbjct: 343 DEIGQLTENIKTMAKNIKNLIDQVYLAEVQKQQIIAKQREIQFEMLCSQINPHFLFNTLE 402 Query: 379 AISSSIR-LNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDK 437 AI Q+++ LS LR +IE+ D I ++KE+ +K+++ I++ RFGDK Sbjct: 403 AIRMKAFCTGQYEIAQVVYLLSNLLRKSIEMTID-LITLEKEVEIVKEFLEIQKFRFGDK 461 Query: 438 LTVIYDI-DEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 + ++ D+ ++ + +IQPLVEN+I HGI+P GKG + I V + ++I V D Sbjct: 462 IYYKIEVQDDLLSSKVLPFIIQPLVENSIRHGIEPIIGKGTIEIKVFKKDGTIKIIVTDN 521 Query: 497 GHGIDPKVIERVEA--NEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIP 551 G G+ + +E V + + +GL NV HR+KL YGE I L GT + IP Sbjct: 522 GAGMPKEKLEEVLQSLDSKDKSHVGLKNVFHRLKLFYGEEAKIFINSELGKGTSVEIQIP 581 Query: 552 NQ 553 + Sbjct: 582 KR 583 >UniRef50_B6FKZ9 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FKZ9_9CLOT Length = 468 Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats. Identities = 62/239 (25%), Positives = 109/239 (45%), Gaps = 18/239 (7%) Query: 318 YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNAL 377 + + +M + ++ E + L E + LQ +INPHFL+N L Sbjct: 223 RINEIAVLMDNFNDMTKEIGNLVVDIKEKEKNLHL------METKLLQEQINPHFLYNTL 276 Query: 378 NAISSSIRLN-PDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGD 436 + I N + A ++ +LS + R + + + I +++E I Y+ I+Q R+ D Sbjct: 277 DTIVWLAEDNRNEEAVAMVTSLSDFFRTTL-CQGRDYITVREEEAHIISYLKIQQFRYQD 335 Query: 437 KLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRD 495 + I+EE+ IP LL+QPLVENA+ HG++ +GK ++ + + ++ V D Sbjct: 336 IMDYEIQIEEEMKKFVIPKLLLQPLVENALYHGVKKKRGKSLIRVKGFQKDEKLIFQVID 395 Query: 496 TGHGIDPKVIERVEANEMPG------NKIGLLNVHHRVKLLYGEGLHI---RRLEPGTE 545 G G+ + + + N G GL NV+ R++ YGE + GT Sbjct: 396 NGKGMSAEELNTLRENVQKGPDERKNKGFGLANVNQRIRHYYGETYGLYIESTENEGTV 454 >UniRef50_C6JDI9 Histidine kinase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDI9_9FIRM Length = 595 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 89/358 (24%), Positives = 147/358 (41%), Gaps = 48/358 (13%) Query: 232 CEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQN---------------------GDDFI 270 ++ R+ AD + IT + Y G Y + Sbjct: 243 SKLFRNVTAAD-MGITENKGTVKYYGANNQEYIVTYSKSMVTGWYTLAMIPVNVFSKNIA 301 Query: 271 SPTTRQAMNYGKIIIKNN-------DEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAH 323 + TR + I I + + +I +G T +I Y + Sbjct: 302 TDLTRAILILVTIEIILSVTTAVLISRKIGKKVYKPLHMIEKTGEGNF--TARIVYDNRD 359 Query: 324 QIT---SSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAI 380 + L EM L ++ + E + E+ +L ++NPHFL+N+LN I Sbjct: 360 EFAFFYKKLNEMNQNLQMLVHEKYE------MMIQKRDTEIMSLNIQMNPHFLYNSLNII 413 Query: 381 SSSIRLNPDT-ARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLT 439 + A +++ +LSR L+Y D + + +EL +K YI I Q R+ D+ Sbjct: 414 NWVCLKGEQENASKMLLDLSRMLQYT-SQNGDVLVPLWEELDWLKRYIGIMQKRYQDQFE 472 Query: 440 VIYDIDEEVNCC-IPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGH 498 V DI E + +P L +QP VENAIVHG + + G + IS E N + V D G Sbjct: 473 VSMDIPEYLRSLEVPKLFLQPFVENAIVHGFKNYQDSGKIWISAEEEENDILFYVEDNGC 532 Query: 499 GIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQ 553 GI + ++ V E IG+ N + R++++YGE + +LE GT + +P + Sbjct: 533 GICEEDLKEVLNKERK--SIGVRNTNKRIRMIYGEKYGVTISSQLEEGTVVTIRLPLK 588 >UniRef50_C6J4K8 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J4K8_9BACL Length = 590 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 75/279 (26%), Positives = 137/279 (49%), Gaps = 21/279 (7%) Query: 294 TPEIHSMLVIPLWEKGVVTGTLKIY-YCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQL 352 P + + E G G + + Y + + +S M + ++I S +E Sbjct: 315 NPLKKLIREMRQVEIGNFRGMVNVSSYQEINILVASFNRMVSRIEELIERVKISSVSE-- 372 Query: 353 REMANKAELRALQSKINPHFLFNALNAISSSI-RLNPDTARQLIFNLSRYLRYNIELKDD 411 AEL ALQS++NPHFL+N L+ I + D +L+ +LS RY+ E KD Sbjct: 373 ----KNAELHALQSQVNPHFLYNTLDMIYWMLDEKENDRLGELVLSLSSMFRYSSEWKDG 428 Query: 412 EQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQ 470 ++ +++EL QI Y+ I R +L V IDE ++ +P + +QP++ENA+ +G++ Sbjct: 429 AKVTLREELEQINHYLTIILIRLEGRLRVEKSIDERWLDIRLPKMTVQPIIENAVKYGLE 488 Query: 471 PCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEM---------PGNKIGLL 521 K +GV+ + E G+ ++I V D G+G+ + + ++ + + IGL Sbjct: 489 SLKRQGVLKLYTQEVGDVLKIVVEDNGNGMTAERLAWLKQSINCPIPKVSGTGSSGIGLQ 548 Query: 522 NVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRTPV 557 N+H R++ ++GE + + GT++A +P Sbjct: 549 NLHRRLQHMFGERYGLEIESIPDQGTKVAVVLPLPMEGE 587 >UniRef50_C2L0L8 Possible two-component sensor kinase YesM n=1 Tax=Oribacterium sinus F0268 RepID=C2L0L8_9FIRM Length = 648 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 64/265 (24%), Positives = 127/265 (47%), Gaps = 28/265 (10%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 + SL + + ++ ++ + +E ++E+ ALQS+INPHFL+N L + Sbjct: 369 TEIVHLGESLLQSLQRIDELTEERI------RQQEEKRQSEMDALQSQINPHFLYNTLES 422 Query: 380 ISSSIRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 + I + A ++ L+ + R ++ I + +E+ K+Y+ I++ RF +K Sbjct: 423 VVWMIESGKREDAVFMVTQLASFFRISLSA-GKNIIPLSQEIQHAKNYMNIQKIRFKNKF 481 Query: 439 TVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNR-----VRIA 492 TV +D++EE ++C L++QP++ENAI HG++ G + +S V ++ Sbjct: 482 TVDFDVEEEVLSCLTVKLILQPILENAIYHGMEGMDEDGEILVSGRIQEEEDGRRSVLLS 541 Query: 493 VRDTGHGIDPKVIERVEAN-----------EMPGNKIGLLNVHHRVKLLYGEGLH---IR 538 V+D G G+ + + G+ +G++NVH R++L +G I Sbjct: 542 VKDNGFGMTEDKARALLEKTESDYSSFSSQKKRGSGVGVINVHRRIQLRFGSIYGLRVIS 601 Query: 539 RLEPGTEIAFYIPNQRTPVASQATL 563 + GT++ +P +Q +L Sbjct: 602 APDEGTDVQVLLPAIPFTEENQKSL 626 >UniRef50_A9KIW6 Histidine kinase internal region n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIW6_CLOPH Length = 604 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 63/243 (25%), Positives = 114/243 (46%), Gaps = 16/243 (6%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 + + M+ L+ ++ Q EQ + +E +ALQS+INPHFL+N L+ Sbjct: 364 DEIGDLIETYNFMSDQLNHLMLAQ------EQASKDLRLSEFKALQSQINPHFLYNTLDM 417 Query: 380 ISSSIRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 I+ + + LSR+ + + K + + +K EL I Y+ ++ RF DK+ Sbjct: 418 INWMAQAGKSSEISLAVQRLSRFYKLTLS-KGNNIVSVKSELEHITLYVQLQNMRFDDKI 476 Query: 439 TVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGK-GVVTISVAECGNRVRIAVRDT 496 D+ +E ++ IP L+ QP+VEN+I+HGI + K G + I + + + D Sbjct: 477 HFFIDVPDEILDYEIPKLIFQPIVENSILHGILEKETKEGNIVIMGWMDDDDLIFVISDD 536 Query: 497 GHGIDPKVIERVEAN---EMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYI 550 G GI ++ + G+ I ++N H R+++ +G + TE+ I Sbjct: 537 GVGITSDILSNILKGTVNTDKGSSIAIMNTHTRLQVYFGNEYGLSFRSTEGVETEVEIRI 596 Query: 551 PNQ 553 P + Sbjct: 597 PAR 599 >UniRef50_C0D041 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D041_9CLOT Length = 564 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 72/276 (26%), Positives = 130/276 (47%), Gaps = 18/276 (6%) Query: 290 EAHRTPEIHSML-VIPLWEKGVVTGTLKI-YYCHAHQITSSLQEMAVGLSQIISTQLEVS 347 H + +H + + +KG + ++ ++T S M Q + Sbjct: 294 SRHLSQPVHQLDEAMGEIKKGNLEIHMETDREDELGRLTESFNRMTEEYRQ------NLV 347 Query: 348 RAEQLREMANKAELRALQSKINPHFLFNALNAISSS-IRLNPDTARQLIFNLSRYLRYNI 406 R+ + N+ +LR +Q+++NPHFL+N L+++ + + L +L+ LR I Sbjct: 348 RSVARQRELNETQLRMMQAQLNPHFLYNTLDSMKWLGVTHHVPQVATLATDLAVILRAGI 407 Query: 407 ELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAI 465 E I ++ EL + YI I+ RF D+ T D+ + + C +P L++QPLVENAI Sbjct: 408 S--GSEFITLEDELELVDRYIDIQSLRFEDRFTCEIDVPDRLQSCLVPKLVLQPLVENAI 465 Query: 466 VHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMP--GNKIGLLNV 523 +HG+ + G + + E + ++V D G GI P V+ R+ + + G +GL NV Sbjct: 466 IHGVVDRED-GYIKLQAEEQEGDLLLSVYDNGCGIPPDVLARLNSKDQKIPGEHLGLFNV 524 Query: 524 HHRVKLLYGEGLHIR---RLEPGTEIAFYIPNQRTP 556 ++L +GE I G+ + +P Q+ Sbjct: 525 SSIIRLHFGEKYGISAETTPGDGSCVRLLLPIQKKE 560 >UniRef50_B9MP60 Signal transduction histidine kinase, LytS n=2 Tax=Clostridia RepID=B9MP60_ANATD Length = 600 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 79/247 (31%), Positives = 130/247 (52%), Gaps = 12/247 (4%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVS-RAEQLREMANKAELRALQSKINPHFLFNALN 378 Q+ MA + +++ +++ R ++L +AE+ ALQS+INPHFLFN L Sbjct: 345 DEIGQVIEEFNIMARKIKELLEKEIKYELRQKELALEKKQAEINALQSQINPHFLFNTLE 404 Query: 379 AISSSIRLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDK 437 I L + I L++ L+ +I +++ I I++E+ I DY+ I++ RFG+K Sbjct: 405 TIRMRSMLKKEFETANAIKLLAKLLKRSIRW-ENDLITIEEEISAIYDYLEIQKYRFGEK 463 Query: 438 LTVIYDIDEEVNC-CIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 L ++DE+V IP + IQPLVENA VHGI+ KG+G + + V + G+ + I V D Sbjct: 464 LKFEIEVDEDVKSTKIPKMTIQPLVENACVHGIENSKGEGRIVVKVLKEGDMIAIHVEDN 523 Query: 497 GHGIDPKVIERVEA-----NEMPGNKIGLLNVHHRVKLLYGEGLHIRRLE---PGTEIAF 548 G G++ I + + + +GL NV R++L Y + L G ++ Sbjct: 524 GKGLEDDKITELLRSVKGLSSDKVSSVGLKNVFRRLELFYNKDFSFEILRSQLGGLKVVI 583 Query: 549 YIPNQRT 555 IPN+R Sbjct: 584 KIPNKRD 590 >UniRef50_A1TDT4 Signal transduction histidine kinase, LytS n=9 Tax=Actinomycetales RepID=A1TDT4_MYCVP Length = 409 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 98/385 (25%), Positives = 171/385 (44%), Gaps = 32/385 (8%) Query: 193 SVEGEKEASAARQAKLALDIANKTLPLFR-HVNSESLRKVCEIIRDDIHADAVAITNTDH 251 R AL A+ R +N++S + +RD AD +A+ + D Sbjct: 26 RTRRVVATPTERAVHAALHTASLAARALRQGLNTDSAQTAAPFLRDLTGADGLALFDGDG 85 Query: 252 -VLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSMLVIPLW-EKG 309 VLA + + + + I +++ PL E G Sbjct: 86 AVLA------EDALDDALWDDDVRDACDDAAHESISGQRRVMAHAGTSAVVAQPLLAESG 139 Query: 310 VVTGTLKIYYCHA---HQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQS 366 + G L + + + + +++ ++Q+E++ + R ++AE+ AL++ Sbjct: 140 DLLGVLVVVTTRSPGPGMLGA-----VGEVARYAASQIELAELDASRARLDRAEVLALRA 194 Query: 367 KINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDY 426 +I+PHF++NALN I+S +R +PD AR+LI + + RY+ + +EL I Y Sbjct: 195 QISPHFIYNALNTIASFVRTDPDRARELILEFADFTRYSFRAAGQ-FTTLAEELRNIDRY 253 Query: 427 IAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAEC 485 + +E+ARFG L V + E +N +P L +QPLVENA+ HG G G + + + Sbjct: 254 LTLERARFGTALKVTLQVAPEVLNVVVPFLALQPLVENAVRHGFAGR-GSGSIELVARDE 312 Query: 486 GNRVRIAVRDTGHGIDPKVIER---------VEANEMPGNKIGLLNVHHRVKLLYGEGLH 536 G+ I V D G G+DP + A+E G +GL NV HR++ +G Sbjct: 313 GSDCVITVEDDGVGMDPDALRSGPGDALSDGAPASEGAGAHVGLTNVDHRLRAAFGNDYG 372 Query: 537 I---RRLEPGTEIAFYIPNQRTPVA 558 + + GT++ +P R+ V Sbjct: 373 LVVETAIGAGTKVIMRVPKFRSGVR 397 >UniRef50_A9QDR5 Putative sensor with HAMP domain n=1 Tax=Paenibacillus sp. JDR-2 RepID=A9QDR5_PAESJ Length = 572 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 116/247 (46%), Gaps = 11/247 (4%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVS-RAEQLREMANKAELRALQSKINPHFLFNALN 378 Q+T M + +I+ + + + L +A+L AL S+INPHFLFN+L Sbjct: 326 DEIGQLTGEFNRMTERIDNLITDVYQADIQKKDLEIRQRQAQLHALHSQINPHFLFNSLE 385 Query: 379 AISSSIRLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDK 437 I + + + I +++ R +I K + I++E+ + ++ I++ RFGDK Sbjct: 386 TIRMRSLMKGETETAKTIHYMAKIFRKSISWK-RSWVSIREEIELTECFLEIQKYRFGDK 444 Query: 438 LTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 L +++ V + IP + P VENA +HGI+ G G++ I + GN++ + D Sbjct: 445 LQYQITVEDTVYDQMIPKMTFLPFVENASIHGIESSPGIGLIQIHIGIAGNKLMFRLSDN 504 Query: 497 GHGIDPKVIERVEA----NEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFY 549 G G+ + + ++ G+ +G+ NV+ R+KL Y + GT + Sbjct: 505 GIGMSQAKLSELLNYLRLDDSIGDNVGMKNVYTRLKLCYKDSFEFDIASEEGHGTTVELR 564 Query: 550 IPNQRTP 556 +P Sbjct: 565 LPLDMNG 571 >UniRef50_A8RNT0 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RNT0_9CLOT Length = 565 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 76/261 (29%), Positives = 136/261 (52%), Gaps = 16/261 (6%) Query: 303 IPLWEKGVVTGTLKI-YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAEL 361 + EKG + +L+I +I S M + +++ E+++ L A + Sbjct: 312 LDQVEKGDLDVSLEITSGDEFERIGHSFNTMIGSIRHLLARHQELAKENML------ATV 365 Query: 362 RALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELY 421 + L+S+ NPHFLFN L +I I+ P A +++ +LSR LRY+I+ + + +K+E+ Sbjct: 366 QILESQFNPHFLFNTLESIRYMIKFGPGEAEKMLVSLSRMLRYSIQ-NGKDVVTVKEEMD 424 Query: 422 QIKDYIAIEQARFGDKLTVIYDIDE-EVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTI 480 I Y+ + R+GD+L D++E N IP + +QP+VEN+I +G + + I Sbjct: 425 FISRYLQVMLYRYGDRLRYSIDLEEGSRNASIPRMALQPIVENSIKYGFGEDRDCLEIRI 484 Query: 481 SVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGN----KIGLLNVHHRVKLLYGEGLH 536 S + + + D G GI +++E+++AN G IG+ NVH R++L+YG G Sbjct: 485 STRIQNEVLSVIISDDGVGISTELLEKLKANLDQGQNQTDHIGIYNVHKRIRLVYGSGYG 544 Query: 537 I---RRLEPGTEIAFYIPNQR 554 + +E GT + +P + Sbjct: 545 VGIDSEMEKGTVVTLRVPCEE 565 >UniRef50_UPI0001788A37 integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788A37 Length = 592 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 77/283 (27%), Positives = 124/283 (43%), Gaps = 18/283 (6%) Query: 290 EAHRTPEIHSMLVIPLWEKGVVTGTLKIYYC-HAHQITSSLQEMAVGLSQIISTQLEVSR 348 P + ++ E G ++ K Q+ S +M + +I R Sbjct: 313 RRIGNPLVQLSRLMRRSEAGDLSVRSKNVGPSEIGQLGRSFNKMIEQIDLLI------RR 366 Query: 349 AEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLN-PDTARQLIFNLSRYLRYNIE 407 KAE+RAL+ +INPHFL+N LN+I +LN + + + L L ++E Sbjct: 367 IAAEESEKKKAEIRALRYQINPHFLYNTLNSIRWMAKLNRTNDVDRSVTALVHLLEGSLE 426 Query: 408 LKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIV 466 I + EL ++ Y+ I+ R+ + + D EE+ + +P +L+QP+VENAI Sbjct: 427 RNGV-FIRLGDELELLRKYMIIQNYRYDHPIELRIDCPEEMEDLHVPRMLLQPIVENAIF 485 Query: 467 HGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPG-----NKIGLL 521 HGI P GV+ I + V + + D G GI P+ I+ + + E IGL Sbjct: 486 HGIAPLDEGGVIQIRITLQQQDVMVRIEDNGIGIKPERIKGLLSYEQDHSKQGMTHIGLR 545 Query: 522 NVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRTPVASQA 561 +VH V+L YG + GT + QR Q+ Sbjct: 546 HVHQTVQLYYGSRYGVWVESTEGGGTRVTVTFAKQRGDDYVQS 588 >UniRef50_C7GCG8 Putative two-component sensor histidine kinase n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GCG8_9FIRM Length = 592 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 67/249 (26%), Positives = 120/249 (48%), Gaps = 13/249 (5%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQL-EVSRAEQLREMANKAELRALQSKINPHFLFNALN 378 + L+ M + ++++ + E + EQ+ + E + L S+INPHFL+N L Sbjct: 345 DEISDLYRDLKVMIDSIQELMNNVIKERVQKEQVNARQKEVEFKMLASQINPHFLYNTLE 404 Query: 379 AISSSIRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDK 437 I R+ N +L L++ +R NI++ + +K EL ++ Y+ I+ RF D+ Sbjct: 405 TIRMQARIHNQPDIEELAKMLAKIMRRNIQVS-NTLQPLKSELKLVEYYLKIQDYRFHDR 463 Query: 438 LTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 + + + ++ + LLIQP VENA VHG++ + G + I V + + I V D Sbjct: 464 IHYRIETEGDIEPLKVMPLLIQPFVENAFVHGLEAKESGGEIVIRVEVR-SHLWITVTDN 522 Query: 497 GHGIDPKVIERVEANEM-----PGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAF 548 G G+ + ++ V IG+ NV+ R+KL YGE + R GT++ Sbjct: 523 GCGMSMEKLDEVRRGLNDFENLDRTHIGICNVNQRIKLQYGEDYGVEFESRTGAGTKVCI 582 Query: 549 YIPNQRTPV 557 +P + + Sbjct: 583 KLPVLTSEI 591 >UniRef50_C6CV72 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CV72_PAESJ Length = 596 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 69/272 (25%), Positives = 129/272 (47%), Gaps = 18/272 (6%) Query: 294 TPEIHSMLVIPLWEKG--VVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQ 351 T I +++ K L ++T + M +S +I + + R Sbjct: 330 TKRIRRLIIHVRKVKHGHFQLAPLPASDDEIGELTHNFNTMVQNISGLIEEKSSLGR--- 386 Query: 352 LREMANKAELRALQSKINPHFLFNALNAISSSI-RLNPDTARQLIFNLSRYLRYNIELKD 410 EL+ALQ++INPHFL+N L+ I++ N D ++++ L+ + + ++ Sbjct: 387 ---EVKNKELKALQAQINPHFLYNTLDLINAMAIESNADDIKRVVDELAVFYKLSLS-SG 442 Query: 411 DEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGI 469 E + ++ EL I+ Y+ I+ RFGD + + +++ ++ +C +P +L+QPLVENAI+HGI Sbjct: 443 KEYVSLESELKHIEAYVRIQNMRFGDTVRLEFEVPRDLYDCRLPKILLQPLVENAILHGI 502 Query: 470 QPCK-GKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEM---PGNKIGLLNVHH 525 +G + IS + I V D G G++ + + + G G+ N+ Sbjct: 503 MEKDNEEGEIRISAWTDKGDLFIEVSDDGVGMNAEQLSAILQAPSEEGEGGGYGVRNIEE 562 Query: 526 RVKLLYGEGLHI---RRLEPGTEIAFYIPNQR 554 R++L YG + GT + +P +R Sbjct: 563 RLQLSYGLQYGLKFDSSEGEGTRVLLRLPERR 594 >UniRef50_C6D150 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D150_PAESJ Length = 626 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 63/248 (25%), Positives = 127/248 (51%), Gaps = 21/248 (8%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 + S+ + + + ++ + E +A+L+ALQ++INPHFL+N L+ I+ Sbjct: 384 LERSVDHLILRVRTLVEEKYLAEIHE------REAQLQALQAQINPHFLYNTLDMINWIA 437 Query: 385 R-LNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 Q+I +L++Y R ++ K + ++ E+ + Y+ I+Q+RF + V + Sbjct: 438 IGKGASDISQMIDSLAKYFRLSLN-KGKSIVSVEDEVRLAEVYLGIQQSRFPNTFDVRVE 496 Query: 444 IDEEV-NCCIPSLLIQPLVENAIVHGIQP-CKGKGVVTISVAECGNRVRIAVRDTGHGID 501 ++ ++ C IP L++QP+VENA++HGI+ + +G+++I V E + I + D G G++ Sbjct: 497 VNPQIAGCRIPKLILQPIVENALLHGIRKMKQRRGLISIIVTEENEDLLITISDNGIGME 556 Query: 502 PKVIERVE--------ANEMPGNKIGLLNVHHRVKLLYGEGLHIRR---LEPGTEIAFYI 550 + + ++ ++ G+ GL NV+ R+KL G+ + L GT + + Sbjct: 557 EERVRQLLKAALPPEEKSDATGSSYGLFNVNERIKLYSGDHYGLEITSALGVGTTVTIRM 616 Query: 551 PNQRTPVA 558 R Sbjct: 617 RADRAHEG 624 >UniRef50_C6CWQ5 Putative sensor with HAMP domain n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWQ5_PAESJ Length = 591 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 72/267 (26%), Positives = 121/267 (45%), Gaps = 15/267 (5%) Query: 295 PEIHSMLVIPLWEKGVVTGTLKI-YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLR 353 P M + +G + + ++ M ++ ++ E+ E Sbjct: 334 PIKKLMSAMRSVGEGDFEARVDVDRKDEFGLLSQRFNRMNDRIAMLVKENYEIKLKE--- 390 Query: 354 EMANKAELRALQSKINPHFLFNALNAISSSIRLNPD-TARQLIFNLSRYLRYNIELKDDE 412 +AE++AL ++NPHFL+N LN ++ + N +++ LS L Y KD E Sbjct: 391 ---KEAEIQALNMQMNPHFLYNTLNIMNWTALENRQTELSKMLVCLSNMLHYT-SRKDWE 446 Query: 413 QIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQP 471 + + +EL +++Y I ARF K TV Y+I+ + +P LL QP VENAI+HG Sbjct: 447 AVHLSEELEWMRNYFFIMSARFEGKFTVAYEIEPVLYENKLPRLLFQPFVENAILHGFSG 506 Query: 472 CKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLY 531 + G +TI + VRD G GI + I+ + E IG+ N R+++ Y Sbjct: 507 VEEGGQITIRGWIEDDSRYFEVRDNGRGISKEGIDAILYKE--SASIGIKNTISRIRMAY 564 Query: 532 GEGLHI---RRLEPGTEIAFYIPNQRT 555 G+ I GT I ++P++ Sbjct: 565 GDEYGIRIHSAPGKGTSIVIHLPSKTQ 591 >UniRef50_C5EPY4 Two-component sensor kinase yesM n=2 Tax=Clostridiales RepID=C5EPY4_9FIRM Length = 603 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 68/286 (23%), Positives = 131/286 (45%), Gaps = 24/286 (8%) Query: 290 EAHRTPEIHSMLVIPLWEKGVVTGTLKIYY-----CHAHQITSSLQEMAVGLSQIISTQL 344 + ++ + V G + Y ++ + +M ++I+ Sbjct: 318 MLISQSVYKPVKILYRMMEDVENGDFSVRYTYPSSDEFGKLGKNFNQMLERTQELINQIY 377 Query: 345 EVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPD-TARQLIFNLSRYLR 403 E ++ +EL+ALQ++I PHFL+N+L++I +R++ + A +++ LS + Sbjct: 378 E------EQKKLKNSELKALQAQIQPHFLYNSLDSIMWLLRMDKNRDAEKMLAELSTLFK 431 Query: 404 YNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVE 462 ++ K +E I I +EL I Y+ I + K + + D + + LL+QPLVE Sbjct: 432 ISLS-KGNEVITISEELRHITSYLFITNMIYSKKFEYVIECDPVLYSYKTLKLLLQPLVE 490 Query: 463 NAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVE-------ANEMPG 515 NAI H + K + + + EC + + ++V+D G+D KV+E + + Sbjct: 491 NAIAHAVPLQGQKVFIQVRIHECQDSLVLSVQDISRGMDSKVLENLRQQLEAPVQPDRRD 550 Query: 516 NKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRTPVA 558 + GL NV+ R+ +L+G+ + E GTE+ IP + Sbjct: 551 SGYGLYNVNERIHILFGKNYGLTITSEPEFGTEVCIRIPKLKGDDT 596 >UniRef50_C6JDE5 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDE5_9FIRM Length = 548 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 127/283 (44%), Gaps = 19/283 (6%) Query: 288 NDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVS 347 N+ + ++ + + V + ++ + +M V L + S +E Sbjct: 262 NEISMPIKKLTESTKLVQRGQYDVQMDIPNTSGEIVELYQNFNKMIVALQKYTSKIIE-- 319 Query: 348 RAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDT-ARQLIFNLSRYLRYNI 406 ++ A +ALQ++INPHFL+N L+ I+ IRLN + A ++ +++ R ++ Sbjct: 320 ----EQKKLRLANYKALQAQINPHFLYNTLDTIAWDIRLNDNKRALSILMAFTQFFRTSL 375 Query: 407 ELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAI 465 K ++ + + +E + Y+ I++ R+G+ + + E+ + +P +++QPLVEN+I Sbjct: 376 R-KGEDMVTLGQEFEHVTSYLQIQEHRYGEIMEYRTKYNPELKDNMLPKMILQPLVENSI 434 Query: 466 VHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN-------EMPGNKI 518 HGI+ G V I I V D G G+ ++++ + + + Sbjct: 435 YHGIKKKDELGYVIIYTKCYNEYYEIVVYDNGGGMSKTRLQQINESLIKRSPLKTESSGY 494 Query: 519 GLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRTPVA 558 G+ N+ R+K+L+G + T++ +P Sbjct: 495 GVYNIDERIKILFGFDYGLTFYSEENRYTKVVVRLPYSTQEEG 537 >UniRef50_UPI0001C35A89 histidine kinase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35A89 Length = 593 Score = 261 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 63/238 (26%), Positives = 108/238 (45%), Gaps = 14/238 (5%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 +T S +M +S ++ Q ++ E + LQS+INPHFL+N L+ Sbjct: 361 DEIGVLTDSFNDMVRQISGLLKEQYKLG------YEIKDLEFQVLQSQINPHFLYNTLDM 414 Query: 380 ISSS-IRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 I I L R+ ++ + + +K EL + Y+ I+ RF + Sbjct: 415 IYWLGIDSQTPDVADAARELGRFYMLSL-GHGETIVTVKNELDHVAAYVNIQNMRFENHF 473 Query: 439 TVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPC-KGKGVVTISVAECGNRVRIAVRDT 496 +I D+ EE+ + I +++QPLVENAI+HG++ G +TI + I++ D Sbjct: 474 KLITDVPEELYSYKIIKIILQPLVENAILHGLREKSSESGTITIKARLDDGVITISIEDD 533 Query: 497 GHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIP 551 G GI P+ ++ + G+ N+H R++L YG + R GT + P Sbjct: 534 GVGIPPEKLDSLLTKNEKS-GYGVWNIHERIQLSYGSQYGLRYTSRPYIGTTVYITFP 590 >UniRef50_A7VR10 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VR10_9CLOT Length = 563 Score = 261 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 70/260 (26%), Positives = 136/260 (52%), Gaps = 17/260 (6%) Query: 311 VTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINP 370 ++ + I I S+++M+ + + Q + +A+ ALQS+INP Sbjct: 311 MSNRVAISRDEEAFILDSIRKMS------LKNEQITEELSQRVALLKQAQAVALQSQINP 364 Query: 371 HFLFNALNAISSSIRL---NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYI 427 HFL N L++IS + + A ++ L++ LRY+++ D + ++KEL + Y+ Sbjct: 365 HFLHNTLDSISWTAIRLTGGKNKASVMLTKLAQILRYSLD-DVDTLVPLRKELENTRIYL 423 Query: 428 AIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECG 486 +++ R+ + V +DI+E ++ + +++QP+VENAI HGI+P G++ IS G Sbjct: 424 ELQELRYNNCFCVEWDIEETILDIHVIKIILQPIVENAIQHGIKPLGKDGLIHISAKPQG 483 Query: 487 NRVRIAVRDTGHGIDPKVIERVEANEMP-----GNKIGLLNVHHRVKLLYGEGLHIR-RL 540 + ++I++RD G GI + + ++ IG++NVH R++L YG+ + Sbjct: 484 SFLQISIRDNGVGIPAERLSAIQNALQSDMIKQNEGIGIVNVHQRIQLFYGKEYGVSISS 543 Query: 541 EPGTEIAFYIPNQRTPVASQ 560 E GT + +P + ++ Q Sbjct: 544 ENGTCVTMNLPLLKGSISQQ 563 >UniRef50_A6TTD2 Histidine kinase internal region n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TTD2_ALKMQ Length = 578 Score = 261 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 75/245 (30%), Positives = 122/245 (49%), Gaps = 22/245 (8%) Query: 324 QITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSS 383 ++ + ++ + ++ E +AEL+ALQ++INPHFL+N L A+ S Sbjct: 340 ELNKTYNQLVENTNHLMEVVYEK------ELCLRQAELKALQAQINPHFLYNTLEALYWS 393 Query: 384 IRLNPDTARQLIFNLSRYLRYNIELK--DDEQIDIKKELYQIKDYIAIEQARFGDKLTVI 441 + + +++ +S RY I + E + +K+EL ++ Y+ + + RFGD+LT Sbjct: 394 LEEKGEELAEVVVAMSDLFRYTISGPKVEQEWVLVKEELEHVERYLQVMKMRFGDRLTWY 453 Query: 442 YDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVA--ECGNRVRIAVRDTGHG 499 + N IP LLIQPLVENAI+HG+ G+G V++ V + +R+ I V D G G Sbjct: 454 VSSPSDCNVKIPKLLIQPLVENAILHGVGNKNGQGTVSVIVEDFKLHSRLVIKVIDDGPG 513 Query: 500 IDPKVIERVEANEM-------PGNKIGLLNVHHRVKLLY----GEGLHIRRL-EPGTEIA 547 I+ + + + + + NVH R+KL Y G GL I GT + Sbjct: 514 IEVDALYSIMQSLKFGRVASIKEKGMAIANVHKRLKLYYKDDEGSGLSIESKVNQGTCVT 573 Query: 548 FYIPN 552 F IP Sbjct: 574 FEIPY 578 >UniRef50_UPI0001788A7F integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788A7F Length = 606 Score = 261 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 65/249 (26%), Positives = 119/249 (47%), Gaps = 23/249 (9%) Query: 319 YCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALN 378 Q+ S ++ + ++ + + +A++ ALQ +INPHFL+N L+ Sbjct: 342 VDEVGQLIISYNRLSSRIVKLTDEV------KLNESLKKEADMHALQVQINPHFLYNTLS 395 Query: 379 AISSSIRLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDK 437 +I +N D +++ +LS +LR+++ E I++E+ ++ Y+ I+ R+ DK Sbjct: 396 SIHWLALMNQDVKIAEMVGSLSDFLRFSLN-NGQEYCTIQQEIMHVRHYVNIQTIRYPDK 454 Query: 438 LTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 ++E++ + LL+QPLVEN+++HGI G G +TI +R V D Sbjct: 455 FEFKDLVEEDLYQHTMLKLLLQPLVENSMLHGILSRDGVGTITIRGHREPEGIRFVVEDD 514 Query: 497 GHGIDPKVIERVEA-----------NEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEP 542 G G+ + ++ ++ + P GL NVH R+ L YG+ + Sbjct: 515 GIGMTAERLKWLQEQLVENPLQYEKGQTPRGSYGLRNVHKRLLLHYGKDAGLRVESTEGT 574 Query: 543 GTEIAFYIP 551 GT + F IP Sbjct: 575 GTRVMFTIP 583 >UniRef50_A8SSH4 Putative uncharacterized protein n=8 Tax=Clostridiales RepID=A8SSH4_9FIRM Length = 635 Score = 261 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 69/285 (24%), Positives = 136/285 (47%), Gaps = 18/285 (6%) Query: 290 EAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRA 349 + P + + +E G T + S+++ + ++ + Sbjct: 343 KKISKPILKLNESVKSYETGGTTDIYIGGSSEIRHLGYSVKKSYEQIEVLMQEII----- 397 Query: 350 EQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPD-TARQLIFNLSRYLRYNIEL 408 + + K+E+ ALQS+INPHFL+N L +I+ + N + A +I L++ LR ++ Sbjct: 398 -RQQNERRKSEMDALQSQINPHFLYNTLESITWMVEANRNTDAVFMISELAKLLRISLS- 455 Query: 409 KDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVH 467 K I I E+ Y+ I++ R+ ++ + IDEE+ + C L++QP++ENAI + Sbjct: 456 KGRTVIRIADEIQHSTSYMNIQKVRYKERFATEFIIDEEINDYCTVKLIVQPILENAIYY 515 Query: 468 GIQPCKG--KGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMP----GNKIGLL 521 G+ G +T+ + G+ + I+V D G G+ +V + + G+ +G++ Sbjct: 516 GVGNMDEDDGGKITVRGEKKGDDIYISVEDNGMGMTEEVARNILVDNNKVPKHGSGVGVI 575 Query: 522 NVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRTPVASQATL 563 NVH R+KL++G + + GT++ +IP ++ L Sbjct: 576 NVHSRIKLMFGSEYGLKVYSEPDEGTKVVIHIPAIPYTEENRERL 620 >UniRef50_A4XFU3 Histidine kinase internal region n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XFU3_CALS8 Length = 578 Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats. Identities = 71/271 (26%), Positives = 126/271 (46%), Gaps = 17/271 (6%) Query: 297 IHSMLVIPLWEKGVVTGTLKIYY-----CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQ 351 ++ + + + + +Y ++ + M+ L+++++ + Sbjct: 313 LYPLKQLRILIDNISNQNFDVYMQPKGNDEVSKLIQAFNSMSAKLNELMNQVYIAT---- 368 Query: 352 LREMANKAELRALQSKINPHFLFNALNAISSSIR-LNPDTARQLIFNLSRYLRYNIELKD 410 +AEL+ALQ +INPHFL+N L+ I + R A L+ LS+ R + K Sbjct: 369 --IKQKEAELKALQERINPHFLYNTLDTIYWTARLEGAKKACILVEALSKLFRSILANKS 426 Query: 411 DEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDI-DEEVNCCIPSLLIQPLVENAIVHGI 469 + I +K+E+ + YI I++ R+ D + ++ + + L++QP+VENAI HGI Sbjct: 427 N-IITVKEEIEHLDSYILIQKVRYQDLIEFSLNVQSQALCFKTVKLVLQPIVENAIYHGI 485 Query: 470 QPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKL 529 + KG ++I V ++ V DTG G +V E N+ P KIGL NV+ R+KL Sbjct: 486 EKSGKKGKISIEVFTKDEKLYFIVSDTGAGAPKEVFESALKNDSPNGKIGLKNVNDRIKL 545 Query: 530 LYGEGLHI---RRLEPGTEIAFYIPNQRTPV 557 +G I GT++ P + Sbjct: 546 AFGNEYGIKIESTPGLGTKVTVIQPALKEGD 576 >UniRef50_A7VHF0 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A7VHF0_9CLOT Length = 580 Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats. Identities = 68/267 (25%), Positives = 121/267 (45%), Gaps = 20/267 (7%) Query: 298 HSMLVIPLWEKGVVTGTLKIYY-----CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQL 352 + + + + TG L + + + M L I+ + Sbjct: 315 KRISKLQKKMRNLETGNLGMEIENDSTDEIGDLINGYNSMTKRLDATINEVY------RS 368 Query: 353 REMANKAELRALQSKINPHFLFNALNAISSSI-RLNPDTARQLIFNLSRYLRYNIELKDD 411 + + E+RALQ++INPHFL+N+L+ I+ + + ++ +LS + R + K Sbjct: 369 KIKEKEYEMRALQAQINPHFLYNSLSIINWKALEADQEDISRITLSLSTFYRTALN-KGK 427 Query: 412 EQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQ 470 + ++ E+ IK Y+ I+ D VIYDID+ + +L++QP++ENAI HGI Sbjct: 428 NILLVRDEIANIKAYLDIQLTMHDDSFDVIYDIDDSILKYETLNLILQPILENAIHHGID 487 Query: 471 PCKGK-GVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKL 529 + G + IS E +R AV D G G+ + E + + G+ NV+ R+KL Sbjct: 488 LKQDGRGEIRISGKEDDKDIRFAVSDNGVGMTQEQAELILTADSK--GYGVRNVNERIKL 545 Query: 530 LYGEGLHI---RRLEPGTEIAFYIPNQ 553 YG + + GT + + P + Sbjct: 546 YYGAEYAVCIDSEVGRGTTVTIHFPKE 572 >UniRef50_B8FU12 Signal transduction histidine kinase, LytS n=2 Tax=Desulfitobacterium hafniense RepID=B8FU12_DESHD Length = 645 Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats. Identities = 76/221 (34%), Positives = 123/221 (55%), Gaps = 2/221 (0%) Query: 340 ISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLS 399 + ++ + AE+ L+S+I PHFL+NALN+I++ + PD A ++ LS Sbjct: 419 MHYYEVLANLRISMKRTQDAEIAFLRSQIKPHFLYNALNSIAALCKEAPDQAEDVVIQLS 478 Query: 400 RYLRYNIELKD-DEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQ 458 YLR + + K D +KKE ++ Y+ IE+ RFG +L V YDIDE +N IP L++Q Sbjct: 479 EYLRGSFDFKTLDSLTTVKKETELLEAYLNIEKVRFGKRLNVEYDIDESINFPIPPLILQ 538 Query: 459 PLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKI 518 PLVENA+ HG+ G V IS+ + V ++ D G G++P ++R+ N + Sbjct: 539 PLVENAVRHGLMSGVSGGTVKISIKKEMANVVFSIEDDGIGMEPSQVKRLLEQAPDENGV 598 Query: 519 GLLNVHHRVKLLYGEGLHI-RRLEPGTEIAFYIPNQRTPVA 558 GL N++ R++L+YG L + GT ++F +P + Sbjct: 599 GLWNINQRLRLIYGNELEVWSERGVGTRVSFQLPWNSRETS 639 >UniRef50_C6CT65 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CT65_PAESJ Length = 584 Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats. Identities = 79/254 (31%), Positives = 129/254 (50%), Gaps = 22/254 (8%) Query: 321 HAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAI 380 +++ ++ +M L+++I E + ++ EL+ALQ++INPHFLFN L A+ Sbjct: 336 EINELNNTYNQMVAYLNELIEVVYEK------EIIQSRTELKALQAQINPHFLFNTLEAL 389 Query: 381 SSSIR-LNPDTARQLIFNLSRYLRYNIEL-KDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 ++ + + Q++ +S RY I DE + + EL + Y+ I + R D+L Sbjct: 390 YWALEDKDEEELSQVVVAMSGLFRYVINRADGDEWVTVADELEHAERYLKIMEMRLIDRL 449 Query: 439 TVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECG--NRVRIAVRD 495 + DE + IP LLIQPLVENAI HG++ G+G V I + + +RI+V D Sbjct: 450 KWSIEGDESLRGVPIPKLLIQPLVENAISHGVEQRIGQGSVVIGIEKTERPGYIRISVTD 509 Query: 496 TGHGIDPKVIERVEANEM-------PGNKIGLLNVHHRVKLLYG---EGLHI-RRLEPGT 544 G G++ ++ + A G +G+ NV R++L YG EGL I GT Sbjct: 510 NGPGMNFDKVQSLYAAMKQGHVHDAKGTGVGISNVDRRIRLYYGEETEGLQIQSEQGTGT 569 Query: 545 EIAFYIPNQRTPVA 558 ++F IP + A Sbjct: 570 RMSFEIPIEHGGEA 583 >UniRef50_B9Y3V6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3V6_9FIRM Length = 571 Score = 260 bits (666), Expect = 7e-68, Method: Composition-based stats. Identities = 67/262 (25%), Positives = 114/262 (43%), Gaps = 34/262 (12%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 + S ++ + ++++ L+ + +AELR LQ++INPHFL+N L+ Sbjct: 324 DEIATLARSFNKLTAQIQRLMNQLLD------QEKAKRRAELRILQAQINPHFLYNTLDM 377 Query: 380 ISSSIR-LNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 + N + QLI LS + R ++ + DE I + +EL ++ Y+ I++ RF ++ Sbjct: 378 LHWMAYDHNDEDMLQLISTLSSFYRISLN-RGDEFIPLPRELDHVRYYLEIQKMRFAEQF 436 Query: 439 TVIYDIDEEVNCCIPSLLIQPL----------VENAIVHGIQPCKGKGVVTISVAECGNR 488 + E Q L ENA+ HGI+PC ++I G Sbjct: 437 DFTIEASPET---------QSLLMLKLLLQPLAENAVAHGIKPCPHPCTLSIQARRRGAD 487 Query: 489 VRIAVRDTGHGIDPKVIERVEANEMPGN---KIGLLNVHHRVKLLYGEGLHI---RRLEP 542 V I V D G G+D + + ++ G GL+NVH R++L YG+ + Sbjct: 488 VEIKVSDNGVGMDSETLGQLRRAFDTGKSSLGFGLVNVHQRIRLTYGKDYGLTLDSTSGQ 547 Query: 543 GTEIAFYIP-NQRTPVASQATL 563 GT + IP + L Sbjct: 548 GTVVTVRIPTIEEDHDVENIDL 569 >UniRef50_C7IMD1 Histidine kinase n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IMD1_9CLOT Length = 594 Score = 260 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 73/281 (25%), Positives = 133/281 (47%), Gaps = 22/281 (7%) Query: 284 IIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQ 343 +K E T + + +P E Q++ L M ++ +I Sbjct: 324 RVKRISEDMHTVTLGNFDFLPSIEGND----------EIGQLSRDLGVMVKSINDLIKEV 373 Query: 344 LEVS-RAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNP-DTARQLIFNLSRY 401 V+ + QL + +L+ L S+INPHFLFNAL AI N + ++I L + Sbjct: 374 YVVNMQKNQLAIRQREIKLKILASQINPHFLFNALEAIRMRAYCNGDEEVAEVIMLLGKI 433 Query: 402 LRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPL 460 +R N+E+ +E + +E+ IK Y+ I++ R+ ++ + ++ + +IQP+ Sbjct: 434 MRRNLEI-GNELVFFHEEVNLIKAYLDIQKFRYRNRFNYTLNYSRALDNYKMLPFIIQPI 492 Query: 461 VENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMP-----G 515 +ENA+VHG++ + G +++ + +RI + D G G+D + + + + G Sbjct: 493 IENAVVHGLKSVEEGGDISLKAEKESGILRIIIEDNGCGMDEEQMRYIADSLNEVEDSVG 552 Query: 516 NKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQ 553 IGL NVH R+KL YGE + L GT++ +P + Sbjct: 553 QHIGLKNVHQRIKLYYGEDHGMTITSTLGKGTKVEITLPAE 593 >UniRef50_UPI0001C35C0F integral membrane sensor signal transduction histidine kinase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35C0F Length = 542 Score = 260 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 75/274 (27%), Positives = 127/274 (46%), Gaps = 16/274 (5%) Query: 290 EAHRTPEIHSMLVIPLWEKGVVTGTLKIY--YCHAHQITSSLQEMAVGLSQIISTQLEVS 347 + +I+ + + G++ Y L EM+ + +I EV Sbjct: 275 SRYINRKIYGTIHMIDQVGTGQFGSMITYDDRDEFSFFYEKLNEMSRNIKALIHENYEV- 333 Query: 348 RAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRL-NPDTARQLIFNLSRYLRYNI 406 + E+ L ++NPHFL+N LN I+ + + A ++I +LSR L+Y Sbjct: 334 -----KLQQKDFEIMILTIQLNPHFLYNTLNIINWTCLAGDTPKASRMIVDLSRMLQYT- 387 Query: 407 ELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAI 465 + + ++ ++ +K YI I Q R+ ++ V +DI EE+ +P L +QPLVENAI Sbjct: 388 SQSRKQLVYLRDDIDWLKRYIEIMQIRYENQFEVNFDIPEELLGKEVPKLFLQPLVENAI 447 Query: 466 VHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHH 525 VHG + + KG++ IS + V D G G+ + ++ V G IG+ N Sbjct: 448 VHGFKNSEEKGILEISAETDEENIYFTVEDNGVGMTQQRVKEVLR--FTGTSIGVANTDR 505 Query: 526 RVKLLYGEGLHI---RRLEPGTEIAFYIPNQRTP 556 R+K+LYG+ + +L GT + IP Q Sbjct: 506 RIKILYGDAYGVSLHSQLGEGTAVVVTIPKQGGS 539 >UniRef50_C6CWA9 Putative sensor with HAMP domain n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWA9_PAESJ Length = 580 Score = 260 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 77/308 (25%), Positives = 137/308 (44%), Gaps = 18/308 (5%) Query: 252 VLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSMLVIPLWEKGVV 311 ++ Y + ++ +I T + ++ + + Sbjct: 281 LIPYSSFLSKAHLTAKRILTYALVSLGLMAILIYVTARL--FTKRMEKLVGMIRRIERED 338 Query: 312 TGTLKIY---YCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKI 368 + I QI ++L++M+ LS +IS +AEL LQ++I Sbjct: 339 FELIDIRPLGRDEIGQIGNALRKMSQRLSSLISDVY------MKEIDKREAELNVLQAQI 392 Query: 369 NPHFLFNALNAISSSI-RLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYI 427 NPHFL+N+L +ISS R + +++ +L+++ R ++ K + I +E+ + Y+ Sbjct: 393 NPHFLYNSLASISSLAIRNDDPRMNKMVTDLAKFYRISLN-KGKNTLSIHEEIQLTRYYV 451 Query: 428 AIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECG 486 +I+Q RF + L V YDI+E + C I L +QP VEN I H I + + I G Sbjct: 452 SIQQVRFANLLRVHYDIEESVLPCRILKLTLQPFVENCINHAIWDHECGINIIIRAYREG 511 Query: 487 NRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPG 543 + + V D G G+ + +E + G+ NV +R+KLL+G+ + RL G Sbjct: 512 QDIILKVIDDGMGM-KMPSGDLPQSEDTLSGYGVRNVDNRIKLLFGDSYGVSIFSRLGIG 570 Query: 544 TEIAFYIP 551 T + IP Sbjct: 571 TSVTIRIP 578 >UniRef50_C6LKL4 Putative HAMP domain protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LKL4_9FIRM Length = 611 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 69/292 (23%), Positives = 133/292 (45%), Gaps = 21/292 (7%) Query: 285 IKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQL 344 E+ + + + ++ + + +++ + +I+ +L Sbjct: 324 AILTRTITHPVELLRNRISLIAGGDFSQDSSILWDSELGDMGQDINQLSSDIQTLINKRL 383 Query: 345 EVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRL-NPDTARQLIFNLSRYLR 403 EV +Q E R LQS++NPHFL+N LN+I + N ++ LS L+ Sbjct: 384 EVENEKQA------YEYRLLQSQVNPHFLYNTLNSIKWMATIQNAPGIAEMTTALSGLLK 437 Query: 404 YNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE--VNCCIPSLLIQPLV 461 NI + I++E ++DY I++ R+G + + ++I++E + IP +QP+V Sbjct: 438 -NISKGSSTLVTIRQEFALLEDYFIIQKYRYGGMIQMKFEIEDETLCDNEIPRFSLQPIV 496 Query: 462 ENAIVHGIQPCKGKGVVTISVAE-CGNRVRIAVRDTGHGIDPKVIERVEANEMPGNK--- 517 EN+I HGI+P G++ I + V+I V D G GI+P+ I+ + G Sbjct: 497 ENSIFHGIEPKGQPGLIRIHLFAPDDKTVQIDVTDNGTGIEPEKIKTLLTENAGGQGSFF 556 Query: 518 --IGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQ--RTPVASQAT 562 IG+ NV+ R++ YG+ + T ++ +P++ + + T Sbjct: 557 RNIGISNVNKRLQYTYGDRFGLKITSETGSYTTVSVLLPHKLIKEENYNAET 608 >UniRef50_UPI0001C356D2 putative sensor with HAMP domain n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C356D2 Length = 601 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 68/245 (27%), Positives = 124/245 (50%), Gaps = 18/245 (7%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 I + M+ +S ++ T++E + E++ LQ++INPHFL+N L++ Sbjct: 363 DEIGMIGRQINHMSGHISTLLETRVEN------EKEKKDMEIKMLQAQINPHFLYNTLDS 416 Query: 380 ISSSIRLNPDT-ARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 I + ++ ++ LS L+ N+ +E++ +++EL +++Y+ IE+ R+ + Sbjct: 417 IKWIATMQKNSGIVSVVTALSSLLK-NMAKGFNEKVTLRQELDFLQNYVIIEKIRYIELF 475 Query: 439 TVIYDID--EEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 + ++ E + I L +QP+VENAI GI+P G++TI V + I+V D Sbjct: 476 DIDIIVEQEELYDARIIKLTLQPIVENAIFSGIEPSGRTGLITIRVWVKSGVLHISVTDN 535 Query: 497 GHGIDPKVIERVEANEMPGN-----KIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAF 548 G GI P+ IE++ + IGL NV R KL+YGE + ++ T I Sbjct: 536 GIGISPENIEKLLTDTSRITRSNMSGIGLPNVDRRFKLVYGEDYGLTIESVVDQYTTITI 595 Query: 549 YIPNQ 553 +P + Sbjct: 596 TLPLE 600 >UniRef50_A4XMX5 Integral membrane sensor signal transduction histidine kinase n=2 Tax=Clostridia RepID=A4XMX5_CALS8 Length = 613 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 76/243 (31%), Positives = 124/243 (51%), Gaps = 10/243 (4%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVS-RAEQLREMANKAELRALQSKINPHFLFNALN 378 + M + L ++I ++ + + L +AEL ALQS+INPHFLFN L+ Sbjct: 364 DEIGNVIKEFNNMTIKLKELIEKEMLSEIQRKTLEIEKKQAELNALQSQINPHFLFNTLD 423 Query: 379 AISS-SIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDK 437 +I S+ N ++I L+R LR I ++ +++E+ ++D++ I++ R G+K Sbjct: 424 SIRMRSVLKNELETAEIIKYLTRTLRRLIYW-GNDITTVEEEIGFVEDFLKIQKYRLGEK 482 Query: 438 LTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 L +DE NC IP + IQPLVENA +HGI+ +G G + I V + + I V D Sbjct: 483 LAYRIYVDEVARNCLIPKMTIQPLVENACIHGIEEIEGNGEIIIEVKKEEAYLIIKVEDN 542 Query: 497 GHGIDPKVIERVEANEMPGN---KIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYI 550 G G+D + + ++ N IGL NV+ R+ L Y + + GT + I Sbjct: 543 GIGMDEEKLSQLYENLSNNTYEKNIGLKNVYKRLMLYYNNAVDFKIHSNFKQGTRVVIKI 602 Query: 551 PNQ 553 P + Sbjct: 603 PLE 605 >UniRef50_A9U6Q4 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U6Q4_PHYPA Length = 530 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 70/247 (28%), Positives = 121/247 (48%), Gaps = 25/247 (10%) Query: 321 HAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAI 380 +++ S +M ++++I E + ++ EL+ALQ++I+PHFLFN L A+ Sbjct: 20 EINELNHSYNQMVEHMNELIGLVYEK------EILQSRTELKALQAQIHPHFLFNTLEAL 73 Query: 381 SS-SIRLNPDTARQLIFNLSRYLRYNIELKDD-EQIDIKKELYQIKDYIAIEQARFGDKL 438 + + D + + ++ RY I E + ++ EL I+ Y+ I + R GD+L Sbjct: 74 YWSLMEKDEDELAEYVVAMADLFRYTITGPGKEEWVRLEDELEHIERYLLIMKMRLGDRL 133 Query: 439 TVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGN--RVRIAVRD 495 + + + +P LLIQPLVENAI+HGI+ G G V++ V+ + + + V D Sbjct: 134 SWSISSPPALASVPMPKLLIQPLVENAILHGIEGRIGPGKVSVGVSLSADQMHLVVTVTD 193 Query: 496 TGHGIDPKVIERV-------EANEMPGNKIGLLNVHHRVKLLYG----EGLHI---RRLE 541 G GID + R+ G+ +G+ NV R+KL YG + + ++ Sbjct: 194 DGKGIDEDNLRRIVTALQTGMTPPFKGSGMGIFNVQQRIKLYYGGDRPDESGLAIDSQIH 253 Query: 542 PGTEIAF 548 GT F Sbjct: 254 RGTRCHF 260 >UniRef50_C5EPZ3 Histidine kinase internal region n=4 Tax=Clostridiales RepID=C5EPZ3_9FIRM Length = 628 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 65/260 (25%), Positives = 120/260 (46%), Gaps = 25/260 (9%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 + + M + ++ +Q + + +AE RALQ++INPHFL+N L+ Sbjct: 375 DEIGVLADTYNYMTEEIGLLMDSQKDAADN------LRRAEFRALQAQINPHFLYNTLDM 428 Query: 380 ISSSIRLN-PDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 I+ + + I LSR+ + + I+ EL + YI+++ R+ + + Sbjct: 429 INWLSQTGRNQEVTRAIQALSRFYKLTLSRNG-LMNSIETELQHVSLYISLQNMRYDNCV 487 Query: 439 TVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCK-GKGVVTISVAECGNRVRIAVRDT 496 T + D+ +E+ + IP L QP+VENA +HGI + KG + ++ + G+ + + D Sbjct: 488 TFVMDVPDELYDYTIPKLTFQPIVENAFLHGIMTTEQKKGSILLTGWKSGDDIEFIISDD 547 Query: 497 GHGIDPKVIERVEANEMPG------------NKIGLLNVHHRVKLLYGEGLHI---RRLE 541 G GI P+ ++ + + IG+ N + R+K LYGE + L Sbjct: 548 GAGIPPEKLDTLMHDMGHADMDAGVKQQASPGHIGIYNTNLRLKSLYGEMYGLSFTSTLG 607 Query: 542 PGTEIAFYIPNQRTPVASQA 561 GTE+ IP + + + Sbjct: 608 RGTEVTVRIPARHITDSLEQ 627 >UniRef50_C5EHR4 Histidine kinase internal region n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHR4_9FIRM Length = 579 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 74/292 (25%), Positives = 139/292 (47%), Gaps = 18/292 (6%) Query: 269 FISPTTRQAMNYGKIIIKNNDEAHRTPEIHSML-VIPLWEKGVVTGTLKIY-YCHAHQIT 326 ++ G + + T I + + E + ++ Y + ++ Sbjct: 294 ILTMALLAVGAAG--VYACHFVDKTTRPISQLCEFMLQVEGENLDQECSVHGYTEINILS 351 Query: 327 SSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRL 386 + L M + ++ Q + + EL LQ++INPHF++N L +I + + Sbjct: 352 NRLNAMLNRMRGLMEGI------RQKEKQKRRMELSFLQAQINPHFMYNTLFSIKCMVDM 405 Query: 387 NP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDID 445 + A +++ + + LR + +E + I++E ++ Y+ I++ R+ D VI++ D Sbjct: 406 EKNEEASRMLVSFIQLLRSTLS-NPNEFVMIREEFQVLRQYVEIQKFRYDDGFQVIFECD 464 Query: 446 EEVNCC-IPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKV 504 E V IP LLIQPL+ENAI HG++ KG+G++ I+ V + V D G GI P+ Sbjct: 465 EGVEEKKIPKLLIQPLLENAIFHGVEFKKGEGLIIITARALDGGVAVTVEDNGMGIAPET 524 Query: 505 IERVEANEMPGN--KIGLLNVHHRVKLLYGEGLHIRRLE---PGTEIAFYIP 551 IE++ E G +G++NV R++L +G ++ GT+I +P Sbjct: 525 IEKINRGERMGEKAHVGIVNVKERIQLNFGGNYGMKIESVQWEGTKIILNLP 576 >UniRef50_C4IIT8 Integral membrane sensor signal transduction histidine kinase n=2 Tax=Clostridium butyricum RepID=C4IIT8_CLOBU Length = 567 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 64/241 (26%), Positives = 113/241 (46%), Gaps = 15/241 (6%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 + +M ++ +I + R + E++ALQ++INPHFL+N+L+ Sbjct: 336 DEVGTLVRGFGKMINQINSLIEDVY------KSRIIQKDYEMKALQAQINPHFLYNSLSL 389 Query: 380 ISSSI-RLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 I+ + + +LS + R + K + +K E+ +K Y+ I+ + Sbjct: 390 INWMAIEADQKDISGITLSLSSFYRTALN-KGKNILLVKDEILNMKSYLDIQLMMHDYEF 448 Query: 439 TVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGK-GVVTISVAECGNRVRIAVRDT 496 +ID+E + I +LL+QPL+ENAI HGI + G +TIS V ++V D Sbjct: 449 DAEINIDDEILEYKILNLLLQPLIENAIDHGIDLKRSGRGKITISGYMDNGNVVLSVCDN 508 Query: 497 GHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQ 553 G G++ ++ + G+ NV+ R+KL YG I ++ GT + IP Q Sbjct: 509 GIGMEQDKVDTILTENSK--GYGVRNVNERIKLYYGSEYEIKINSKIGEGTTMIVRIPAQ 566 Query: 554 R 554 + Sbjct: 567 K 567 >UniRef50_C4ZBY3 Putative uncharacterized protein n=6 Tax=Clostridiales RepID=C4ZBY3_EUBR3 Length = 597 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 71/269 (26%), Positives = 130/269 (48%), Gaps = 16/269 (5%) Query: 292 HRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQ 351 P + + +E G + S++ ++++ + Sbjct: 318 ISKPIMKLDDSVKRYENGNEADIYVGGSSEIRHLGYSIRNSYKQNNELMKKIV------W 371 Query: 352 LREMANKAELRALQSKINPHFLFNALNAISSSIRLNP-DTARQLIFNLSRYLRYNIELKD 410 + K+EL LQS+INPHFL+N L++I+ I + A +I L++ R ++ K Sbjct: 372 EQNERRKSELDVLQSQINPHFLYNTLDSITWMIEGGKNEEASFMITQLAKLFRISLS-KG 430 Query: 411 DEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGI 469 I ++ EL K Y+ I++ R+ +K V +++DEE ++ C L++QP++ENA+ +GI Sbjct: 431 HTIIPVRDELLHAKSYMNIQKVRYKNKFEVSFEVDEEIMDYCAVKLVLQPILENALNYGI 490 Query: 470 QPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN----EMPGNKIGLLNVHH 525 + G + + + G + I V D G GI I + N G+ +GL+NV++ Sbjct: 491 RELDDFGEIVVGGQKVGEDIIITVSDNGMGIPENEIPFLLTNTDRVHKKGSGVGLVNVNN 550 Query: 526 RVKLLYGEGLHI---RRLEPGTEIAFYIP 551 R+K+L+GE + L+ GT + IP Sbjct: 551 RIKILFGERYGLHIESELDEGTVVTIKIP 579 >UniRef50_A1HM13 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HM13_9FIRM Length = 612 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 19/274 (6%) Query: 297 IHSMLVIPLWEKGVVTGTLKIYY-----CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQ 351 I + + K V G + ++ +M L+ ++ E Sbjct: 330 IRPIRRLQHVMKSVEVGNFNVRAAILSQDEIGELARGFNKMVERLAGLMEEVYFTKLRET 389 Query: 352 LREM-ANKAELRALQSKINPHFLFNALNAISSSIR-LNPDTARQLIFNLSRYLRYNIELK 409 + + EL+ALQS++NPHFL N L + + + + +L + LRYN+ Sbjct: 390 EARLGQKEMELKALQSQLNPHFLCNTLETVRGMALARDMEDIATIAASLGQLLRYNLR-S 448 Query: 410 DDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHG 468 + +++E+ + Y+ I+Q RFG++ T +DI E + I +QPL+EN HG Sbjct: 449 HALLVPLREEVKFCQLYLKIQQFRFGNRFTYKFDIPEWAWDLQIVKFSLQPLLENCFAHG 508 Query: 469 IQPCKGKGVVTISVAECGNRVRI-AVRDTGHGIDPKVIERVEANEMP------GNKIGLL 521 Q + +T+S G+ I V D G G++P V+ER+ A+ G IG++ Sbjct: 509 FQYGESPLAITVSARREGDDAYIVEVADNGAGMEPAVLERIRADLTQKDVTAGGQSIGIV 568 Query: 522 NVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPN 552 NVH R+ LY E + + G I +P Sbjct: 569 NVHRRIVRLYDERFGVMVDSQPGQGAVIILRLPL 602 >UniRef50_A8S8Z5 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8Z5_9FIRM Length = 605 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 67/281 (23%), Positives = 129/281 (45%), Gaps = 24/281 (8%) Query: 301 LVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAE 360 + + + I + ++A + +++ ++E R +Q + E Sbjct: 330 RIETVGSGNFAPDRTVEWNNELGDIGRGINQLAENVDSLMTRRVEDERRKQ------ELE 383 Query: 361 LRALQSKINPHFLFNALNAISSSIRLN-PDTARQLIFNLSRYLRYNIELKDDEQIDIKKE 419 R LQ+++NPHF++N LN+I + +++ +R + +I + + +++E Sbjct: 384 YRMLQNEVNPHFIYNTLNSIRWMATIQHAPGIAEMVTAFARLTK-SISKGTQKLVPLQEE 442 Query: 420 LYQIKDYIAIEQARFGDKLTVIY-DIDEEV---NCCIPSLLIQPLVENAIVHGIQPCKGK 475 L + DY I+Q R+G L + I+ E +C IP +QPLVENAI HG++P G Sbjct: 443 LALLNDYFTIQQYRYGGDLEIEVSRIESETLCRDCMIPRFTLQPLVENAIFHGLEPKGGH 502 Query: 476 GVVTISVAECGN--RVRIAVRDTGHGIDPKVIERVEANEMPG-------NKIGLLNVHHR 526 G V + ++ + V + + D G G+ P+ + + G +GL NV+ R Sbjct: 503 GSVLLDISTDPDTGDVLLRITDDGVGMPPEQVAHLLDEPAEGAEKAEKFRHVGLWNVNRR 562 Query: 527 VKLLYGEGLHI---RRLEPGTEIAFYIPNQRTPVASQATLL 564 ++ +GEG + + GTE+ +P Q+ A + Sbjct: 563 IRYSFGEGYGLTIESEEDVGTEVTIRLPYQQKGDTHAADIT 603 >UniRef50_B8I948 Histidine kinase n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I948_CLOCE Length = 600 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 69/236 (29%), Positives = 120/236 (50%), Gaps = 14/236 (5%) Query: 325 ITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI 384 + ++ ++ V + +++ E + A +L+ALQ++INPHFL+N L++I I Sbjct: 367 LENNANQLVVTIKRLMEESYEA------KLKARDYQLKALQAQINPHFLYNTLDSIKWMI 420 Query: 385 RLNPDTARQ-LIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD 443 + +I S+Y R ++ K + + + EL I+ YI I Q RF + T+ + Sbjct: 421 LEDHKKDSIWMINAFSKYFRLSLS-KGRDVVTLHDELELIQAYIGIMQKRFSNISTIDIN 479 Query: 444 IDEEV-NCCIPSLLIQPLVENAIVHGIQPCK-GKGVVTISVAECGNRVRIAVRDTGHGID 501 I++ + C IP L +QPLVENA+ HGI + G + I+ E ++ I ++D G G+ Sbjct: 480 IEDNLKECLIPKLSLQPLVENALNHGILHKQASDGQLVITAKEENGKLEIIIKDNGKGMS 539 Query: 502 PKVIERVEANEMPGN-KIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQ 553 + +ER+ E GL NV R+KL G+ + L GT + +P + Sbjct: 540 LEQLERLLNEENSNTKGYGLGNVDERLKLFGGDDCGLTVSSELNIGTTVTLSLPLR 595 >UniRef50_B8I426 Putative sensor with HAMP domain n=2 Tax=Clostridium RepID=B8I426_CLOCE Length = 627 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 79/280 (28%), Positives = 136/280 (48%), Gaps = 28/280 (10%) Query: 296 EIHSMLVIPLWEKGVVTGTLKIYYCHAHQIT---SSLQEMAVGLSQIISTQLEVSRAEQL 352 I+ ++ I ++ + MA + +++ + Sbjct: 341 PINRLVKAMKNMNINNVSDSYIEIDRGDELGFLHKTFNNMAKEIDHLVTWIY------RE 394 Query: 353 REMANKAELRALQSKINPHFLFNALNAISSSIRLNP-DTARQLIFNLSRYLRYNIELKDD 411 + +AEL+ALQS+INPHFLFN L +I+ +LN ++ +LS L +I +DD Sbjct: 395 QITRKEAELKALQSQINPHFLFNTLESINWMAQLNNVPEISNIVTDLSALLEASI-GRDD 453 Query: 412 EQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQ 470 I I++E I YI++ + RF DK+T+ +ID + + IP LLIQPL+ENA+ HG++ Sbjct: 454 RLIPIEEEFMYIDKYISLLKRRFEDKITLKKEIDPQVLYIKIPRLLIQPLIENAVYHGVE 513 Query: 471 PCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN-------------EMPGNK 517 + KGV+ ++ G+ + + V D G+GI + + ++ + E Sbjct: 514 SSREKGVIMLNARIQGDTILLEVIDNGNGISKEDLLKLNKSLEMDNDTYFKSLREKKNKS 573 Query: 518 IGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQR 554 IG+ NV+ R+KL YGE I + T++ +P Q Sbjct: 574 IGIDNVNRRIKLFYGEKYGIKIESSINIFTKVTVCLPLQT 613 >UniRef50_C6LII7 Putative HAMP domain protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LII7_9FIRM Length = 605 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 68/254 (26%), Positives = 119/254 (46%), Gaps = 17/254 (6%) Query: 319 YCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALN 378 + + S Q MA +S ++ E + E+ L+++INPHFL+N L Sbjct: 355 IEEINHLQESFQHMAYEISNLMDIIQEREE------QKRELEVNFLRAQINPHFLYNTLF 408 Query: 379 AISSSIRLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDK 437 +I ++ + + A Q+I LR + ++ D I + E + Y+ +++ R+G+K Sbjct: 409 SIRCAVEVGKNNQAAQMISAFIDLLRSTLAVR-DSMIPLCDEFEATRKYLVVQKLRYGEK 467 Query: 438 LTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 + ++ E C + L++QPL ENAI HGI+ G V I A G R+ + + D Sbjct: 468 INYELELQEGTEQCMVLPLILQPLAENAIFHGIEAKYETGTVVIESALLGERLLLTITDD 527 Query: 497 GHGIDPKVIERVEA-----NEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAF 548 G G+D + +E+V A + IG+ NVH+R++L YGE + GT + Sbjct: 528 GAGMDERTLEKVRACLKQPAVKDDSSIGMPNVHNRIRLNYGEEYGLTVESSKGIGTTVTL 587 Query: 549 YIPNQRTPVASQAT 562 +P + Sbjct: 588 LMPAIFQKEEKHES 601 >UniRef50_C6CVX1 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVX1_PAESJ Length = 600 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 72/260 (27%), Positives = 122/260 (46%), Gaps = 20/260 (7%) Query: 318 YYCHAHQITSSLQEMAVGLSQI-ISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNA 376 Y I + M + ++ ++ + Q +L+ LQS+IN HFL+N Sbjct: 341 YKNEITVIQNHFNHMLQQIKKLTVNLLQSQQQLHQTEMDKQLFQLKGLQSQINAHFLYNV 400 Query: 377 LNAISSSIRLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFG 435 L+AI N + I NL +Y RY + DE + ++KEL ++ YIAI++ R+G Sbjct: 401 LHAIRGMSMSNAKKEVAEAIDNLVQYFRYIVRY--DEYVLLRKELEHLERYIAIQKIRYG 458 Query: 436 DKLTVIYDIDEEVNCC-IPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVR 494 D+L D+D +N I L++QPLVEN+++HG++ G+ ++ I + +I+V Sbjct: 459 DRLQFKVDMDPSLNSRSIVKLILQPLVENSLMHGLEDKNGRWIIRIRAYAEDHAWKISVM 518 Query: 495 DTGHGIDPKVIERVEANEMP------------GNKIGLLNVHHRVKLLYGEGLHIRR--- 539 D G G+ + +E + G IGL+N+H R+++ YGE + Sbjct: 519 DNGLGMTEEKLECLREEIAGIRVPPEKESAAIGQGIGLVNIHKRIQIYYGEPYGLSVRSW 578 Query: 540 LEPGTEIAFYIPNQRTPVAS 559 GT + IP Sbjct: 579 ENKGTVVTITIPLNGKEDDD 598 >UniRef50_B8I4I2 Putative sensor with HAMP domain n=2 Tax=Clostridium RepID=B8I4I2_CLOCE Length = 594 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 93/352 (26%), Positives = 165/352 (46%), Gaps = 24/352 (6%) Query: 220 FRHVNSESLRKVCEIIRDDIHADA-------VAITNTDHVLAYVGVGEHNYQNGDDFISP 272 +NSESL K I+ + + + +T+ + + VG + Sbjct: 249 LEKLNSESLGKENMILEAYLGNSSYFKGWKLIGVTDRERISDSVGD------TLRFVLIF 302 Query: 273 TTRQAMNYGKIIIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEM 332 + ++ + S ++ + + + + M Sbjct: 303 AFISVLISSLLMYIIVRSYNYRLRKLSKHMLKFKDGKFELININEGEDEIGGVIRNFNLM 362 Query: 333 AVGLSQIISTQLEVSRAEQLREMAN-KAELRALQSKINPHFLFNALNAI-SSSIRLNPDT 390 A ++ +I+ ++ ++ E+ +AE+ LQS++NPHFLFN LNAI S++ N Sbjct: 363 AARINTLINDVYKLELQKKSLELERVRAEINFLQSQMNPHFLFNTLNAILVVSVKNNYTE 422 Query: 391 ARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-N 449 +I LS+ LR + K D+ + I++EL + Y+ IE+ RF DK +++E + + Sbjct: 423 IVDVIKYLSKTLRRLLSWK-DDLVTIEEELSFTEMYLKIEKFRFCDKFHYNINVNETLLD 481 Query: 450 CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVI---- 505 IP + +QPLVENA HGIQ K GV+ I++ C + +R++V+D G GID + Sbjct: 482 YQIPKMSLQPLVENACKHGIQTIKEVGVININIDMCESGLRVSVKDNGSGIDQYTLSGII 541 Query: 506 ERVEANEMPGNKIGLLNVHHRVKLLYGE--GLHIRR-LEPGTEIAFYIPNQR 554 + V++ IG+ NV+ R++L YGE +I + GT I F IP ++ Sbjct: 542 DNVKSEVEQSTSIGIRNVYRRLRLYYGENISFNIESCINTGTTIYFTIPFEK 593 >UniRef50_C0C2A0 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2A0_9CLOT Length = 346 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 68/263 (25%), Positives = 125/263 (47%), Gaps = 26/263 (9%) Query: 319 YCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALN 378 + +++ ++ + +++ Q + + +AE ALQ++INPHFL+N L Sbjct: 88 FDAEYELMPQWNDVMKKVRHLLNKQDAI------KMSKKQAEYLALQNQINPHFLYNTLE 141 Query: 379 AISS-SIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDK 437 AI +I D+ + LS + RY+I D+ + +++E+ +++Y I+ RFG+K Sbjct: 142 AIRGDAICAGLDSVAETTEALSIFFRYSI-TGVDKLVTLEEEIDNVENYFTIQHYRFGEK 200 Query: 438 LTVIYDIDEE---VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVR 494 L + +E + +P L IQP VENAI HG++ GVV + + ++ I V Sbjct: 201 LKLQITYPKEEEVLQLRLPKLTIQPFVENAIYHGLEKKVNGGVVRVKIDTTEQKLMITVS 260 Query: 495 DTGHGIDPKVIERVE------------ANEMPGNKIGLLNVHHRVKLLYGEGLHI---RR 539 D G G+ + +E++ + I + NV+ R+KLL+GE + Sbjct: 261 DNGVGMPEEQVEKINGYFEKVAVSYVGEDRKKKGGIAMKNVNSRIKLLFGEDYGVHVYSV 320 Query: 540 LEPGTEIAFYIPNQRTPVASQAT 562 GT++ +P R + T Sbjct: 321 AGIGTDVKIMLPRLRRDEYEERT 343 >UniRef50_C4G4K8 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G4K8_ABIDE Length = 599 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 65/242 (26%), Positives = 119/242 (49%), Gaps = 17/242 (7%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 ++ SS Q M + + ++I + + + AEL+ALQ++INPHFL+N+L+ Sbjct: 358 DEIGELMSSFQAMTLRMEEMIDEKYRMGK------EVKNAELKALQAQINPHFLYNSLDL 411 Query: 380 ISSSI-RLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 ++ + N +I +L + + ++ + E + + EL ++ Y+ I+ RF K+ Sbjct: 412 VNCLAIQHNVPEIADMINSLVEFYKLSLN-RGQEILSLYDELRHVQTYVRIQNMRFEKKI 470 Query: 439 TVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKG-KGVVTISVAECGNRVRIAVRDT 496 + + + I +++QPLVEN+I+HGI + +G + IS NR+ I + D Sbjct: 471 RLEIIEEPWMKKYAILKIILQPLVENSIMHGILEKEDSRGEIKISSELKDNRIYITIEDD 530 Query: 497 GHGIDPKVIERVEANEMP----GNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFY 549 G G+ IE + G+ G+ N++ R+KL YG + R GT + Sbjct: 531 GVGMSLNQIENLLKETNEVRHRGSGYGVKNINERIKLYYGADYGLIFESRENKGTTVTVS 590 Query: 550 IP 551 IP Sbjct: 591 IP 592 >UniRef50_C0D790 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D790_9CLOT Length = 339 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 79/286 (27%), Positives = 130/286 (45%), Gaps = 39/286 (13%) Query: 294 TPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLR 353 T I+ + + Y Q EM S +++ Sbjct: 69 TKTIYEQFAMGHVLNDLFDVRYP-YTPENEQAIRKFNEMIDR-SNLVN------------ 114 Query: 354 EMANKAELRALQSKINPHFLFNALNAISSSIRL-NPDTARQLIFNLSRYLRYNIELKDDE 412 +AE ALQ++INPHFL+N L I S + D+ ++ L+ + RY I + + Sbjct: 115 VSKKQAEYLALQNQINPHFLYNTLEGIRSEALIAGLDSVAEMTEALATFFRYTIS-QVEN 173 Query: 413 QIDIKKELYQIKDYIAIEQARFGDKL--TVIYDIDEE------VNCCIPSLLIQPLVENA 464 + ++ EL I++Y I+Q RFGDKL ++ YD DE+ + +P L +QP+VEN+ Sbjct: 174 LVPLEDELANIENYYYIQQFRFGDKLALSIEYDCDEDASELDILQYRLPKLTLQPIVENS 233 Query: 465 IVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEA------------NE 512 I HGI+ GKG +TI + +R+RI V D G G+ + ++ Sbjct: 234 IYHGIERKIGKGHLTIRIGASDSRLRIRVSDDGLGMAEDKLHQLNEKLKSLFLDAVEGES 293 Query: 513 MPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRT 555 I ++NV++R+KLL+GE I GT++ +P + Sbjct: 294 SRQGGIAMVNVNNRIKLLFGEEYGICVYSHEGAGTDVLINLPLVQE 339 >UniRef50_A4IP92 Two-component sensor histidine kinase n=5 Tax=Geobacillus RepID=A4IP92_GEOTN Length = 576 Score = 258 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 123/262 (46%), Gaps = 22/262 (8%) Query: 311 VTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINP 370 I ++ S+ ++ + +I T Q + +++EL+ALQ++INP Sbjct: 320 TIDPETITVNEIRELNSTYNQLVRETNHLIKTVY------QKEIIRSQSELKALQAQINP 373 Query: 371 HFLFNALNAISSSI-RLNPDTARQLIFNLSRYLRYNIELK-DDEQIDIKKELYQIKDYIA 428 HFL+N L ++ S+ + ++ ++S RY I +D+ + +K+E I +YI Sbjct: 374 HFLYNTLESLRWSLEEKGEEDLADVVVSMSDLFRYTISRNSNDDWVTLKEEFDHIGNYIE 433 Query: 429 IEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAE-CG 486 I + RFGD++ + E + IP LLIQPLVENA+VHG + +T++ Sbjct: 434 IIKFRFGDRIKWCLLLPEALEHVKIPKLLIQPLVENAVVHGSENQLASCTITVAAELASD 493 Query: 487 NRVRIAVRDTGHGIDPKVIERVEANE-------MPGNKIGLLNVHHRVKLLYGEGLHIRR 539 + ++I V D G G+D + ++ V+ G + L NV R++L Y E + Sbjct: 494 SYIQIVVEDDGVGMDEERLQAVKQAMDTGDIISKSGKGMALHNVKKRLQLYYNEEISDSI 553 Query: 540 L-----EPGTEIAFYIPNQRTP 556 GT+I IP Sbjct: 554 TICSHKNKGTKITLKIPVNGGE 575 >UniRef50_UPI0001B9ECA5 integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ECA5 Length = 628 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 70/271 (25%), Positives = 120/271 (44%), Gaps = 18/271 (6%) Query: 300 MLVIPLWEKGVVTGTLKIYYCHA-HQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANK 358 + + EKG ++ QI S EM LS+ I + Sbjct: 365 IRFMRKVEKGEFVARMQDTKDDQLGQIAGSFNEMLDELSRYIDKVY------KAEINQKN 418 Query: 359 AELRALQSKINPHFLFNALNAISSSIR-LNPDTARQLIFNLSRYLRYNIELKDDEQIDIK 417 AEL ALQ++INPHFL+N L I +I++LS + ++ K +K Sbjct: 419 AELSALQARINPHFLYNTLEVIRMRALSQGAQDVGDMIYSLSMLFKNIVQHKSH--YTLK 476 Query: 418 KELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKG 476 EL + Y+ + + R+ DK D+++ + + + +QPL+EN IVHG++ + Sbjct: 477 DELEACRLYLELFRIRYKDKYIYKMHCDDQIKHVPMIKMSLQPLIENYIVHGLRSDQDDN 536 Query: 477 VVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN----EMPGNKIGLLNVHHRVKLLYG 532 +TI+ + + V I ++D G GI P+ +E +++ E G GL +V+ R+KL YG Sbjct: 537 WLTINATQEDDEVHIEIKDNGKGIPPQRLEDIKSRLDVAESSGESFGLRSVNERLKLTYG 596 Query: 533 EGLHI---RRLEPGTEIAFYIPNQRTPVASQ 560 + GT + P + + Sbjct: 597 SSYGMDIQSEPGNGTTVTVKFPVTERKLNND 627 >UniRef50_C5EPK6 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EPK6_9FIRM Length = 616 Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats. Identities = 68/240 (28%), Positives = 131/240 (54%), Gaps = 7/240 (2%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQL-REMANKAELRALQSKINPHFLFNALN 378 + ++QEM+ + ++ + +Q + + LQS++NPHFLFN L Sbjct: 375 DEMDVLAFNIQEMSGRIKALMDQVVRDKEIQQQNQYQLLEFRYHELQSQVNPHFLFNILQ 434 Query: 379 AISSSIRLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDK 437 +I+ ++N D +LI LS++ R N+E ++ +++EL K+Y+ + + + D+ Sbjct: 435 SINGIAQINGDRQVSRLICMLSKFFRGNLERRNVS-CQLREELEYSKNYLELYKDIYPDR 493 Query: 438 LTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 L + +D+DE ++ IP+ ++QP+VEN++VHG++P G + I + E G + I+V D Sbjct: 494 LDIEWDVDERFLDVGIPTYILQPIVENSLVHGMEPMIGTCTIRIRIREQGGCLVISVWDD 553 Query: 497 GHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQ 553 G GI P+ ++++ A IG+ NV R+++LYG+ + TE+ +P + Sbjct: 554 GQGITPEKLKQLMAGTGESRHIGIRNVQDRIQMLYGKEYGLTIRSEYHEYTEVRLRLPLR 613 >UniRef50_C6LGW6 Putative HAMP domain protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LGW6_9FIRM Length = 601 Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 67/267 (25%), Positives = 129/267 (48%), Gaps = 19/267 (7%) Query: 303 IPLWEKGVVTGTLKIY-YCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAEL 361 + +KG + + + + I + +M V + ++I E AE+ Sbjct: 341 MQQVQKGNLDVVVPVRSFDEIGTIADNFNDMTVKVKELIEEVGEAKE------QQKNAEI 394 Query: 362 RALQSKINPHFLFNALNAISSSIRLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKEL 420 RAL+++INPHFL+N L++I+ + +++ +L LRY++ K ++ + I + Sbjct: 395 RALEAQINPHFLYNTLDSINWMAIEKGEFEISKMLRDLGVILRYSVN-KSNQMVSIWEAA 453 Query: 421 YQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVT 479 ++ YI++ Q RF + + +++E + I LL+QP VEN+I+HG + + G++ Sbjct: 454 DWLEKYISLHQMRFNNAFSCEINVEERIRGGKIYKLLLQPFVENSILHGFRDIESGGLLR 513 Query: 480 I--SVAECGNRVRIAVRDTGHGIDPKVIERVEANEM----PGNKIGLLNVHHRVKLLYGE 533 I S AE G + I + D G G+ P +++ E G IGL N R+ + YG+ Sbjct: 514 IDMSSAEDGGGITIIIEDNGKGMPPHLLKNYNDKEKAIADDGRGIGLHNAFARMHMYYGD 573 Query: 534 GLH--IRRL-EPGTEIAFYIPNQRTPV 557 + + GT + +P ++ Sbjct: 574 EASWNVSSICGMGTVVTLRLPLRKGEE 600 >UniRef50_Q1JFY4 Two-component sensor kinase yesM n=47 Tax=Streptococcus RepID=Q1JFY4_STRPD Length = 577 Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 68/246 (27%), Positives = 120/246 (48%), Gaps = 13/246 (5%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 + + + ++ + + + L+AL S+INPHFL+N L+ Sbjct: 335 PELTDLAQQFNALLDQIDSLMVAVADK------EKAIGQYRLQALASQINPHFLYNTLDT 388 Query: 380 ISSSIRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 I N ++ +L++Y R + + +E I + EL + Y+ I++ R+GDKL Sbjct: 389 IIWMAEFNDSKRVVEVTKSLAKYFRLALN-QGNEYIRLADELDHVSQYLFIQKQRYGDKL 447 Query: 439 TVIYD-IDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTG 497 + +D + IP L++QPLVENAI HGI+ KG++ ++V++ + + V D G Sbjct: 448 SYEVQGLDVYADFVIPKLILQPLVENAIYHGIKEVDRKGMIKVTVSDTAQHLVLTVWDNG 507 Query: 498 HGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQR 554 GI+ + ++ G +GL NV R+KL YG+G H+ + + TEI +P Sbjct: 508 KGIEDSSLTNSQSLLARG-GVGLKNVDQRLKLHYGKGYHMTIHSQSDHFTEIQLSLPKMH 566 Query: 555 TPVASQ 560 +A Sbjct: 567 ELMADD 572 >UniRef50_B8I0Y1 Putative sensor with HAMP domain n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I0Y1_CLOCE Length = 600 Score = 257 bits (658), Expect = 8e-67, Method: Composition-based stats. Identities = 74/270 (27%), Positives = 133/270 (49%), Gaps = 18/270 (6%) Query: 299 SMLVIPLWEKGVVTGTLKIYYCHAHQI-TSSLQEMAVGLSQIISTQLEVSRAEQLREMAN 357 + VI + G + Y + ++ +++ M + +I+ E + + Sbjct: 333 MLSVINRVKVGDYDVKMPYYKDNELKLVSNTFNNMTYEIKYLINQVYEK------QLLIK 386 Query: 358 KAELRALQSKINPHFLFNALNAISSSIRLNPDT-ARQLIFNLSRYLRYNIELKDDEQIDI 416 + E + LQS++NPHFLFN L I +L+ D +++ +L+ L+ I +I I Sbjct: 387 ETEFKFLQSQMNPHFLFNTLITIGYKAKLSKDETVYKMVTSLTELLQAGIYSNSQAKIPI 446 Query: 417 KKELYQIKDYIAIEQARFGDKLTVIYDIDEE--VNCCIPSLLIQPLVENAIVHGIQPCKG 474 ++EL I Y+ +++ RFGDKL + +E +N +P L I+PL+ENA+VHG++ G Sbjct: 447 RQELEFIDFYLYLQKMRFGDKLEYKIYVSDESILNFVLPKLSIEPLIENAVVHGLEEKVG 506 Query: 475 KGVVTISVAECGNRVRIAVRDTGHGIDPKVI-----ERVEANEMPGNKIGLLNVHHRVKL 529 KG + +++ + V D G G I + + + N IGL+N H R+KL Sbjct: 507 KGTIELNIRRENESIFFVVTDDGAGFKTDKINLDDNDTINMRKKGHNSIGLMNTHKRIKL 566 Query: 530 LYGEGLHI---RRLEPGTEIAFYIPNQRTP 556 +YG+ + R G ++ +IP R+ Sbjct: 567 MYGDPYGVQIESRTNIGAKVTVHIPVDRSE 596 >UniRef50_C6CXK8 Signal transduction histidine kinase, LytS n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CXK8_PAESJ Length = 601 Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats. Identities = 75/280 (26%), Positives = 131/280 (46%), Gaps = 21/280 (7%) Query: 294 TPEIHSMLVIPLWEKGVVTGTLKIYYC-HAHQITSSLQEMAVGLSQIISTQL-EVSRAEQ 351 P + ++ + + +K+ + + M + ++ +R + Sbjct: 324 NPVMGLVMDMKRVGRRDRGFRIKVRSTNEVGSLARDINRMMDEMEEMTRDMFNTQARLYK 383 Query: 352 LREMANKAELRALQSKINPHFLFNALNAISSS-IRLNPDTARQLIFNLSRYLRYNIELKD 410 +AE ALQS+INPHFL+N LN ISS + Q+ ++S+ RY+I K Sbjct: 384 SELSQKQAEFSALQSQINPHFLYNTLNCISSIGLEYGSREIAQMTSSMSKIFRYSI--KQ 441 Query: 411 DEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGI 469 DE + IK+E I+ YI I R+ +K + DI+E + P +++QP+VEN++ HG+ Sbjct: 442 DELVQIKEEADCIQAYIKIITIRYDNKFAMKMDIEEGLLRMRTPKMILQPIVENSVYHGL 501 Query: 470 QPCKGKGVVTISVAECG-NRVRIAVRDTGHGIDPKVIE-----------RVEANEMPGNK 517 + G + ++ + V +RDTG G++P+ + + P Sbjct: 502 ERMDQGGQLEVTGSMDEQGDVYFCIRDTGKGMEPEELAALQAKLAADYPERAQDGQPSQS 561 Query: 518 IGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQR 554 IGL N+H+R++LL+GE I R GT + IP + Sbjct: 562 IGLTNIHNRLRLLFGESYGITIESRAGYGTTVTVKIPALK 601 >UniRef50_C0W657 Two-component sensor histidine kinase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W657_9ACTO Length = 581 Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats. Identities = 72/274 (26%), Positives = 128/274 (46%), Gaps = 19/274 (6%) Query: 300 MLVIPLWEKGVVTGTLK-IYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANK 358 + + G ++ + + ++ ++ +A + + + + ++ Sbjct: 309 ARDLRRFGNGELSRRSRLVRSDEIGELATAFNGLADNVVAL------LKQTQEDERTKRD 362 Query: 359 AELRALQSKINPHFLFNALNAISSSI-RLNPDTARQLIFNLSRYLRYNIELKDDEQIDIK 417 E+R L+ +INPHFL+N L I+ R D ++ +L LR I+ + +K Sbjct: 363 YEMRMLRMQINPHFLYNTLETINWMGQRHGADDVVEVSTSLGSLLRSTIDAP--SLVFLK 420 Query: 418 KELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKG 476 +EL ++ Y I+ RFGD + + +ID + + C IP +QPLVENA+VHGI P G+G Sbjct: 421 QELESLRHYARIQHYRFGDGVEIREEIDPDSLACRIPPFTLQPLVENALVHGIAPMGGQG 480 Query: 477 VVTISVAECGNRVRIAVRDTGHGIDPKVIERVEA-----NEMPGNKIGLLNVHHRVKLLY 531 +V IS G + ++V D G G+ P+ + A +E IGL NV RV+ Y Sbjct: 481 LVMISARLDGAYLVLSVSDDGAGMSPERCGEILARSRQPDEQEHGSIGLANVIRRVRGFY 540 Query: 532 GEGLHI---RRLEPGTEIAFYIPNQRTPVASQAT 562 + I + GT + ++P ++ T Sbjct: 541 PQAPQIRLTSEIGEGTTVTIWVPADSDSESTAHT 574 >UniRef50_A4XMI4 Signal transduction histidine kinase, LytS n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMI4_CALS8 Length = 584 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 72/267 (26%), Positives = 129/267 (48%), Gaps = 15/267 (5%) Query: 294 TPEIHSMLVIPLWEKGVVTGTLKI--YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQ 351 T I ++ K K+ ++ ++ +M +++++ E Sbjct: 317 TSPIQRLIAQMKKVKDGSLKVEKVIERKDEIGELINNFYQMINRINELVIKVYE------ 370 Query: 352 LREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDT-ARQLIFNLSRYLRYNIELKD 410 AE+ L ++NPHFL+N L+ I++ LN + L +L+++LR N+ L Sbjct: 371 EEIARKNAEINLLYMQLNPHFLYNTLDTINALAELNRNKDISLLAVSLAKFLRMNMSLN- 429 Query: 411 DEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGI 469 + +++E+ +K Y+ I + RF DKL ++DEE+N +P LI P VEN+IVHG Sbjct: 430 KSLVTVEQEIEHVKYYLTIMKIRFNDKLDYKIEVDEELNKILVPKHLILPFVENSIVHGF 489 Query: 470 QPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKL 529 + K + I V E R+RI + D G GI P+ +E ++ + IG+ NV R+++ Sbjct: 490 ENKKENARIVIKVEEHNERIRIEIIDNGKGIQPQKLEDIKRHLQK-ESIGIHNVLKRLEI 548 Query: 530 LYGEGLHI---RRLEPGTEIAFYIPNQ 553 Y E + + T++ IP + Sbjct: 549 FYKENYYFDISSKFGYWTKVTVEIPFK 575 >UniRef50_A4XMI9 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMI9_CALS8 Length = 614 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 66/269 (24%), Positives = 124/269 (46%), Gaps = 22/269 (8%) Query: 300 MLVIPLWEKGVVTGTLKIY-YCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANK 358 + + E G ++I ++ Q+M + +I + + Sbjct: 348 ISTMRKVENGDFDVKIEIKGDDEIDELAFHFQKMIERIKVLIVDTV------KKELAQKD 401 Query: 359 AELRALQSKINPHFLFNALNAISSSIRLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIK 417 A+++ALQS+IN HF++N L I D I L + +RYN+ K + + Sbjct: 402 AQIKALQSQINAHFIYNVLENIKMMAECKEDYEVSDAITKLGKMMRYNMSWKRK-FVTLY 460 Query: 418 KELYQIKDYIAIEQARFGDKLTVIYDI--DEEVNCCIPSLLIQPLVENAIVHGIQPCKGK 475 EL IK+Y+A+ RF ++ ++ +I +E +N +P L++QP++EN+I +GI+P Sbjct: 461 DELENIKNYVALMNLRFDKEIKLMINIYNEEILNYEVPKLILQPIIENSITYGIEPKGEG 520 Query: 476 GVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMP--------GNKIGLLNVHHRV 527 G + I G + I + D G GI+ + + +++ G I L NV+ R+ Sbjct: 521 GSIFIDANVIGEFLVITIVDDGKGIEEEKLRQIQEAIEKGIDAECYHGQGIALKNVNERI 580 Query: 528 KLLYGEGLHI---RRLEPGTEIAFYIPNQ 553 KL YG+ + + T++ +P + Sbjct: 581 KLTYGKAYGLKIESKENEFTKVTITLPFE 609 >UniRef50_C6LJK1 Two-component sensor kinase YesM n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LJK1_9FIRM Length = 599 Score = 256 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 66/270 (24%), Positives = 130/270 (48%), Gaps = 20/270 (7%) Query: 301 LVIPLWEKGVVTGTLKIY-YCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKA 359 + + + +G ++I ++ S +M + ++I+ + E ++ Sbjct: 337 VAMGKFRRGDFEQQIEITTKDEIGEVASCFNQMVTDIRELINKNYVMVLRE------RES 390 Query: 360 ELRALQSKINPHFLFNALNAISSSIR-LNPDTARQLIFNLSRYLRYNIELKDDEQIDIKK 418 EL LQ++INPHFL+NAL++I + + ++ L++ R + + + ++ Sbjct: 391 ELAVLQAQINPHFLYNALDSIYWQAEGEGDEKTAESVYELAQLFRLVL-GQGKSMVTVEM 449 Query: 419 ELYQIKDYIAIEQARFGDKLTVIYDIDE-EVNCCIPSLLIQPLVENAIVHGIQPCKGKGV 477 EL ++ Y+ I++ RF +++ ++++ +N IP L++QP VENA+VHG+Q Sbjct: 450 ELQLLERYLEIQKLRFHEQMNYSFEVEPAALNVKIPKLILQPFVENAVVHGMQDAVKDFK 509 Query: 478 VTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEM----PGNKIG---LLNVHHRVKLL 530 +T++ G V+ VRD G G+D + R+ + G +IG + NV R+ L Sbjct: 510 ITVAARMEGAFVKFFVRDNGVGMDDVQLRRIWEEDSDKFYSGQRIGRYAIKNVRERLALK 569 Query: 531 YGEGLHI---RRLEPGTEIAFYIPNQRTPV 557 YGE + R+ GT + +P Sbjct: 570 YGENFELNIESRVGRGTLVTVCLPADMEEG 599 >UniRef50_Q5WIY4 Two-component sensor histidine kinase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WIY4_BACSK Length = 599 Score = 256 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 88/282 (31%), Positives = 139/282 (49%), Gaps = 22/282 (7%) Query: 288 NDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVS 347 N + + + + L K + GT QI+ L +M L++ I+ LE + Sbjct: 325 NRLSRLSATMKEVAQGNLTTKVALDGT-----DEIGQISLQLNKMIDDLNESIAQLLEAN 379 Query: 348 RAEQ-LREMANKAELRALQSKINPHFLFNALNAISSSIRL-NPDTARQLIFNLSRYLRYN 405 + L N+ + + + S++NPHFLFN L AI + N + + L + LR + Sbjct: 380 EQKTALERKQNEMKFKMMASQMNPHFLFNTLEAIRMRAHMSNETDIAKAVKRLGQLLRKS 439 Query: 406 IELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYD----IDEEVNCCIPSLLIQPLV 461 +E+ I +K+EL ++ Y+ I+ R+G++LT D ID N + L IQPLV Sbjct: 440 LEV-GSSMIPLKEELEMVRSYLEIQSFRYGERLTYDMDDAVTID---NVAVIPLTIQPLV 495 Query: 462 ENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEAN-----EMPGN 516 ENA+ HG++ + G V I + + + I V D G G+ P+ + V+A E P N Sbjct: 496 ENAVSHGLEAKEADGYVNIRIKQAEDGTWIEVSDNGIGMGPQRQQEVQAMIEDPLEKPEN 555 Query: 517 KIGLLNVHHRVKLLYG-EGLHIRRL-EPGTEIAFYIPNQRTP 556 +IGL NVH R+K YG +GL I GT + F IP + Sbjct: 556 RIGLRNVHQRLKQTYGTDGLLISSSQGEGTTVRFLIPKEEGS 597 >UniRef50_C4FYZ1 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FYZ1_ABIDE Length = 619 Score = 256 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 73/247 (29%), Positives = 117/247 (47%), Gaps = 18/247 (7%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 + M V L ++I T K EL+ LQ +INPHFL+N L Sbjct: 377 DEISILDEHFSHMLVKLDKLIKTNYV------QELDRKKLELKNLQLQINPHFLYNTLET 430 Query: 380 ISSSIRLNPD-TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 ISS +N + L RY++ + + + EL I++YI I++ R+GDKL Sbjct: 431 ISSIAAVNKVFIIGDISGKLGEIFRYSLGKNYGDFVSLNDELKHIENYIFIQKVRYGDKL 490 Query: 439 TVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTG 497 V YDI+ V NC IP ++QP++EN+I+HGI P G + I+V+ +++ I + D G Sbjct: 491 EVFYDIENGVENCLIPRFILQPIIENSILHGIAPKATGGTIEINVSLEESKLVIRIEDDG 550 Query: 498 HGIDPKVIERVEA-------NEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIA 547 G+D E + A + +G+ NV+ R+K +YG + + G+ Sbjct: 551 IGMDSDYAELINAAINSPMTDNEDSTGVGMRNVNQRIKFIYGNEYGLKLKSSVNVGSSCI 610 Query: 548 FYIPNQR 554 P + Sbjct: 611 ISFPAGK 617 >UniRef50_UPI0001789511 integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789511 Length = 625 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 83/358 (23%), Positives = 134/358 (37%), Gaps = 47/358 (13%) Query: 236 RDDIHADAVA-ITNTDHVLAYVGVGEHNYQNGDD--------FIS----PTTRQAMNYGK 282 R A+A T + + GE I+ + A+ K Sbjct: 262 RSMTDNAALAQATGNEGSFRHKVDGEEQLVVYRKSEQTGWLILITVPERQLMQDALKTRK 321 Query: 283 IIIKNNDEAHRTPEI----------HSMLVIPLWEKGVVTGTLKIYYCHAHQ-----ITS 327 I I I + I K V TG L + + + I Sbjct: 322 ITIAAAVGVTSFALIISLILIYALTRPLRSIVHLMKQVQTGKLDVVFPVRRRDEASLIGV 381 Query: 328 SLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSI-RL 386 S M + Q+I + + +AEL LQ +INPHF++N L I + Sbjct: 382 SFNRMMARIKQLIDDIYAI------EKRKKEAELERLQHQINPHFIYNTLETIRMTAVLH 435 Query: 387 NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDE 446 N ++ L + LRY+I E +++K+E +K YI + R+G++ + D Sbjct: 436 NDQEVGDMVQLLGQQLRYSIHA-GSEVVEVKREWEHVKAYIELLNYRYGERFVLTLPDDP 494 Query: 447 EVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVI 505 + + LL QP++ENA+ HG K +TI+ A G V D G G+ + + Sbjct: 495 GADSIRVMKLLFQPIIENAVNHGFDENKSVLHLTITYAMDGMNHVFTVTDDGLGMSAEAL 554 Query: 506 ERVEANEM-------PGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQ 553 R+ + G +GL NVH R++L YG + GT + P + Sbjct: 555 ARLRSMLDQAQPPGTDGRGVGLRNVHERLQLRYGRPYGLTVDSEEGRGTAVRITFPAE 612 >UniRef50_C4FY32 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FY32_9FIRM Length = 575 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 62/242 (25%), Positives = 119/242 (49%), Gaps = 15/242 (6%) Query: 319 YCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALN 378 Y A+++ + ++ + Q++ + + K+E L+++I PHFL+N L Sbjct: 333 YDEANELYQAYHQLLNQVDQLME------QIKIEEAALRKSERNVLEAQIQPHFLYNTLE 386 Query: 379 AISSSIR-LNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDK 437 +I I N A ++ L R LR + K E I +++E + +Y+ I+Q R+ + Sbjct: 387 SILWMIESQNTRDASHMVTALGRLLRITLS-KGKEYIPLEREFEHVTNYLEIQQIRYNQQ 445 Query: 438 LTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 T ++ E+V L++QP+VENAI+HG+ G++TI ++ + I ++D Sbjct: 446 FTYQLELPEQVRSYPTIKLILQPIVENAIIHGLTNLYEPGLLTIEASQSEKGILIQIKDN 505 Query: 497 GHGID---PKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYI 550 G G+ + + R IGL NVH R+++ +G + + + GT ++ I Sbjct: 506 GQGMSVERLEELRRELKQPSDVAGIGLRNVHERLQIYFGPEYGLKIDSQEDQGTCVSLLI 565 Query: 551 PN 552 P+ Sbjct: 566 PH 567 >UniRef50_UPI0001C36197 putative sensor with HAMP domain n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36197 Length = 596 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 80/280 (28%), Positives = 129/280 (46%), Gaps = 24/280 (8%) Query: 302 VIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAEL 361 + + + T + + +M +++++ E + + +AE+ Sbjct: 312 MEQVKRGDLTTRVKPDTEDEINILIREFNDMMRRINELMRRV------ESEQLLVKEAEI 365 Query: 362 RALQSKINPHFLFNALNAISSSIRLNPDTAR-QLIFNLSRYLRYNIELKDDEQIDIKKEL 420 +ALQ +INPHF++N L I D A ++ LS LRYN K+ + +KEL Sbjct: 366 KALQQQINPHFIYNILETIMGLASEGMDDAVIEVSTCLSEMLRYNTRFKNVTVV--EKEL 423 Query: 421 YQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVT 479 QIK+Y+ + + RF D+ V YD+DEE +NC I +QPL+ENAI HG+ G++ Sbjct: 424 EQIKNYVTVIKIRFEDRFEVYYDVDEECLNCRILKFTLQPLLENAISHGLAETDSGGMLR 483 Query: 480 ISVAECGNRVRIAVRDTGHGIDPKVIERVEANE-----------MPGNKIGLLNVHHRVK 528 I + + N V I + D G GI + ++ + +G+LNVH R K Sbjct: 484 IRIKKEENMVSIMIFDNGIGIPEEKLKELNERLKVTGERPLEFIEQYKSLGILNVHLRSK 543 Query: 529 LLYGEGLHI---RRLEPGTEIAFYIPNQRTPVASQATLLL 565 L YG+ I R E GT I IP + ++ Sbjct: 544 LFYGDTYSIEIFSREEKGTCIVMKIPFVCINTRQKENSII 583 >UniRef50_C6CWR8 Histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWR8_PAESJ Length = 606 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 71/284 (25%), Positives = 125/284 (44%), Gaps = 33/284 (11%) Query: 298 HSMLVIPLWEKGVVTGTLKIYYCHAHQ-----ITSSLQEMAVGLSQIISTQLEVSRAEQL 352 S++ + + V G L I + + +S M + +++ Sbjct: 329 KSIIKVVRKMRLVEQGLLDIRVNAQGKDETVLLANSFNSMVQRIGDLLTEV------RTE 382 Query: 353 REMANKAELRALQSKINPHFLFNALNAISSSIRLN-PDTARQLIFNLSRYLRYNIELKDD 411 +E AE+ +Q++I PHFLFN L +I++ N ++ LS LR ++ Sbjct: 383 QERKQHAEMMLMQAQIKPHFLFNTLESINALAAQNEGGKIMMMVRRLSNLLRTSMHHS-- 440 Query: 412 EQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQ 470 E+I + +E+ ++ Y+ I++ RF D T ++ EE I L +QPLVEN+I HG + Sbjct: 441 EEIFLSQEIEHVRSYLEIQKYRFEDLFTYELNVSEEAFEYSILKLTLQPLVENSIQHGFE 500 Query: 471 PCKGK-GVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEM--------------PG 515 + G++TI V +++ I V D GHG++ + +++ E Sbjct: 501 GLEDGAGMITIEVTVEAHQIVILVSDNGHGMNEQTLKKFAEREQPLPSGKRRNAAELGER 560 Query: 516 NKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRTP 556 +GL NV R+++ YG + GT I IP R Sbjct: 561 RGLGLRNVADRLRIHYGPSYGLRICSAEGYGTVIRCTIPKNRGE 604 >UniRef50_C5EHK2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C5EHK2_9FIRM Length = 606 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 69/272 (25%), Positives = 129/272 (47%), Gaps = 17/272 (6%) Query: 300 MLVIPLWEKGVVTGTLKIYYCHAHQITS---SLQEMAVGLSQIISTQLEVSRAEQLREMA 356 + + + G + + I+ ++I+ M +++ + E E Sbjct: 333 VNTMNKVQGGKLNAKVGIHRDEKNEISQIATHFNIMMNTVNEQMQMVKESGVRE------ 386 Query: 357 NKAELRALQSKINPHFLFNALNAISSSI-RLNPDTARQLIFNLSRYLRYNIELKDDEQID 415 +AE+RAL+++INPHF++N L++I+ + ++ ++ LRY I+ + ++ + Sbjct: 387 KEAEIRALEAQINPHFIYNTLDSINWLAIENDQKEISSMLSKFAQILRYQIQ-QSNQIVM 445 Query: 416 IKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKG 474 I +EL ++ Y+ +++ RF D + + E V C I ++ QP +ENAI+HG+ + Sbjct: 446 ISEELSYLERYLYLQKVRFMDSFEYVIECQESVKTCKIHKMIFQPFIENAILHGMADVEH 505 Query: 475 KGVVTISVAE-CGNRVRIAVRDTGHGIDPKVIERVE-ANEMPGNKIGLLNVHHRVKLLYG 532 G++ + + E R+ + D G G+ + I+ V PGN IG+LNV R+ L YG Sbjct: 506 GGLLKVQIREQDEERLAFIISDNGLGMSKEQIDAVFVRRMNPGNSIGVLNVLARLDLYYG 565 Query: 533 EGLHI---RRLEPGTEIAFYIPNQRTPVASQA 561 I GT I IP Q + Sbjct: 566 TAYSIHVESGEGKGTTIETVIPRQCMRPGQEE 597 >UniRef50_B0K3C6 Histidine kinase n=4 Tax=Thermoanaerobacter RepID=B0K3C6_THEPX Length = 414 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 71/236 (30%), Positives = 127/236 (53%), Gaps = 12/236 (5%) Query: 335 GLSQIISTQL--EVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIR-LNPDTA 391 GL++++ +L E R + + EL+ LQS++NPHFLFN LN + N Sbjct: 171 GLNKLMQEKLLEETKRRSEYENIIKSLELKTLQSQVNPHFLFNTLNTAARLAYLENAPRT 230 Query: 392 RQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NC 450 ++I++L+ LRY++ D+ + +K+E+ +K Y+ I++ R+ D + D+ E+ N Sbjct: 231 AEIIYSLASLLRYSLR-NLDQLVALKEEISYLKHYLHIQEIRYKDHIKSQIDVPTEIENV 289 Query: 451 CIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEA 510 +P + +QP+VENAI+HG++ + GV+ I + + I V+D G GID K++E ++ Sbjct: 290 LLPVMSLQPIVENAIIHGLEEKEEGGVINIKAYQKDETIFIEVKDNGVGIDKKMLEVIKN 349 Query: 511 NEMPGNK----IGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRTPVAS 559 + G +GL NV R+K+ +G+ + GT + IP + V Sbjct: 350 DIEKGKGHTTALGLQNVDRRIKMYFGKEYGLEIRSEKGNGTLVVLKIPIIKKEVGK 405 >UniRef50_B8FWU3 Putative sensor with HAMP domain n=2 Tax=Desulfitobacterium hafniense RepID=B8FWU3_DESHD Length = 577 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 61/257 (23%), Positives = 117/257 (45%), Gaps = 17/257 (6%) Query: 301 LVIPLWEKGVVTGTLKIY-YCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKA 359 + EKG + + + +++ M + +++ + + Sbjct: 324 KAMEEVEKGSLATEVGVVGSAEIASLSTHFLSMLDRIRELMQ------EIRNKEQFLRAS 377 Query: 360 ELRALQSKINPHFLFNALNAISSSIRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKK 418 EL+ L S+INPHFL+N L+ I N + + ++R+ R ++ E ++ Sbjct: 378 ELKTLYSQINPHFLYNTLDTIVWLAEFGNTERVITVSKAMARFFRLSLRG-GSETTTVRD 436 Query: 419 ELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGV 477 EL ++ Y+ I++ R+ DKL+ ++ + + IP +L+QPLVENAI HG++ G G+ Sbjct: 437 ELDHVRQYLFIQKERYQDKLSYEIQAEDGLMDITIPKILLQPLVENAIYHGLRKMPGGGM 496 Query: 478 VTISVAE-CGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLH 536 + I+ + + + V D G G + + + + +GL NV R++L YGE Sbjct: 497 IRITARKGEKEDLFLVVEDNGGGFEDAEKGK---DPLRLGGVGLKNVAERIRLYYGEDYG 553 Query: 537 IR---RLEPGTEIAFYI 550 + R G I + Sbjct: 554 LSIANRPGQGATIILRL 570 >UniRef50_UPI0001C36BEE signal transduction histidine kinase, LytS n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36BEE Length = 282 Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 75/246 (30%), Positives = 120/246 (48%), Gaps = 24/246 (9%) Query: 333 AVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRL-NPDTA 391 A Q+ ++++ +R + +A+L ALQS+INPHFL+N L I S L + D+ Sbjct: 34 AERERQLSELEVKLQDEYSVRMVDKQAKLSALQSQINPHFLYNTLECIRSEALLYDCDSI 93 Query: 392 RQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE---- 447 ++ L+ + RY+I K++ + +++E I++Y I+ RF DK + E Sbjct: 94 ARMAKALASFFRYSISKKEN-IVTLREEFNNIENYFLIQSYRFDDKFSFEILAAPEDREA 152 Query: 448 VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIER 507 +C IP L +QP+VENAI HG++ KG VTI V V I V D G GI + +E Sbjct: 153 YSCLIPKLSLQPIVENAIFHGLETKPDKGKVTIRVEMTEKNVIIIVSDDGVGIGREELEL 212 Query: 508 VEANE---------------MPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFY 549 + + GN I L NV R+KL++G+ + GT++ Sbjct: 213 MRDSLKNSKKETDKECKSPGERGNGIALANVSQRIKLIFGDDYGLNLYSTKGIGTDVEII 272 Query: 550 IPNQRT 555 +P Sbjct: 273 LPIMTD 278 >UniRef50_D1PPK9 Putative two-component sensor histidine kinase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPK9_9FIRM Length = 661 Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 64/249 (25%), Positives = 121/249 (48%), Gaps = 25/249 (10%) Query: 319 YCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALN 378 + ++T S +M + L + ++ E+ ++ ++AE++ALQS+INPHF+ N LN Sbjct: 405 HQELRRLTDSFNQMVLSLKNM------LAINEEAQKRKHQAEIQALQSQINPHFIVNTLN 458 Query: 379 AISSSIRL-NPDTARQLIFNLSRY----LRYNIELKDDEQIDIKKELYQIKDYIAIEQAR 433 +I ++ D R++ L+ R + +++EL + Y+ I + R Sbjct: 459 SIRFMAQMSGYDGIRRMAQALASIVSCSFRSSTS-----FYTVREELEMLDSYLYIMRIR 513 Query: 434 FGDKLTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGK-GVVTISVAECGNRVRI 491 + D V Y++ +E C +P L +QP+VENA+ HG + G + I A + + + Sbjct: 514 YADGFEVRYEVADECRACRLPRLTLQPIVENALNHGFADLGEELGQLVIRAAREADALVL 573 Query: 492 AVRDTGHGIDPKVIERVEAN----EMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGT 544 V D G G+D ++ + + E G+ IG+ NV R++L +G + GT Sbjct: 574 EVTDNGCGMDAATVKAILHDTLPREQSGSSIGIQNVLARLRLHFGGAAGLQIDSTPGRGT 633 Query: 545 EIAFYIPNQ 553 + +P + Sbjct: 634 CVRLALPWE 642 >UniRef50_Q5WBZ1 Two-component sensor histidine kinase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WBZ1_BACSK Length = 577 Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 79/305 (25%), Positives = 138/305 (45%), Gaps = 20/305 (6%) Query: 261 HNYQNGDD----FISPTTRQAMNYGKIIIKNNDEAHRTPEIHSML-VIPLWEKGVVTGTL 315 ++ G + A++ I++ E T I + V+ L EKG + Sbjct: 279 EHHIVGASQSLRLFTIGLMLAVSAVVIMLALVAERSLTKPIFELRQVMALAEKGEFHHRM 338 Query: 316 K-IYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLF 374 Q+ M ++++I+ Q AE++ALQ+++NPHF++ Sbjct: 339 NRSSKDELGQLAIGFNHMMKQINELIAKVY------QTEIREKDAEIKALQTQMNPHFIY 392 Query: 375 NALNAISSSIRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQAR 433 N L I+ ++ +L R +RY+I+ K + +++EL ++ YI I+Q R Sbjct: 393 NTLEHINMMAITKQAYELSDMVASLGRLIRYSIDQKTR-FVPLREELAFVESYITIQQKR 451 Query: 434 FGDKLTVIYDIDEEVNCC-IPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIA 492 K+T + E + IP L++QPL+ENAI HG Q + G ++I + I Sbjct: 452 LEGKVTFSIAVPEAMRSLSIPKLILQPLIENAIEHGHQHGEWPGEISIKGWQDDAYSYIE 511 Query: 493 VRDTGHGIDPKVIERVEANEMPGNK--IGLLNVHHRVKLLYGEGLHI---RRLEPGTEIA 547 VRD+G G+ + IER++ G + L N+ R+ LL GE + L GT++ Sbjct: 512 VRDSGQGMKQETIERMKEEPERGAGNQVALGNISERLLLLLGEQARLMIDSELGRGTKVT 571 Query: 548 FYIPN 552 +P Sbjct: 572 VRLPK 576 >UniRef50_B7GJK8 Signal transduction histidine kinase n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GJK8_ANOFW Length = 479 Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 79/250 (31%), Positives = 127/250 (50%), Gaps = 15/250 (6%) Query: 319 YCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALN 378 + + + Q M L +IS +E+ E ++ + EL+ALQS+INPHFLFN LN Sbjct: 229 HDEIGLLGQTFQHMIENLRILISKNMEILEKE---KLVRELELKALQSQINPHFLFNTLN 285 Query: 379 AISSSIRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDK 437 IS + + +L + S LRYN+ K D+ + +++E+ K+Y AI++ARF D+ Sbjct: 286 VISKLAYIEGAEQTSELTVSTSNLLRYNLR-KLDQPVTLREEVEHAKEYFAIQKARFRDR 344 Query: 438 LTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 +T +DE + IP L +QPL+ENA +HGI+ + + + + E N ++I + D Sbjct: 345 VTFEVKVDESCLEQPIPCLTLQPLIENAFIHGIEGMEEGANIQLIIEEKRNCIQITIADN 404 Query: 497 GHGIDPKVIERV------EANEMPGNKIGLLNVHHRVKLLYGEG--LHIRR-LEPGTEIA 547 G G+ V + +GL NV R++L YG L I+ GT I Sbjct: 405 GVGMPYDVQRAIMDASYSLTKTGHSTGLGLENVLRRLQLFYGVEKILEIKSAPNEGTAII 464 Query: 548 FYIPNQRTPV 557 +P + V Sbjct: 465 LRLPRRERDV 474 >UniRef50_B0K233 Integral membrane sensor signal transduction histidine kinase n=10 Tax=Thermoanaerobacterales RepID=B0K233_THEPX Length = 502 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 71/266 (26%), Positives = 133/266 (50%), Gaps = 26/266 (9%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQ-----------LREMANKAELRALQSKI 368 + + + +M V + I + E+ +R + +AEL+ALQS+I Sbjct: 238 DEINILAEAFNKMVVSIKNYIGEIKNQAEVEKKLKEQEMQNLKMRNILKEAELKALQSQI 297 Query: 369 NPHFLFNALNAISSSIRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYI 427 NPHFLFN LNA + + D + + I N++ RYN++ K D + ++ E+ +K Y+ Sbjct: 298 NPHFLFNTLNAAAQLAMMEGADKSSEFIENVANLFRYNLK-KLDTTVTLQDEINNVKTYM 356 Query: 428 AIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECG 486 I + RFGD++ D+DE ++ +P +IQP+VENA +HG++ + G + ++V + Sbjct: 357 YILKTRFGDRVDFKVDVDEGVLDVEMPCTIIQPVVENAFIHGLEDTEKGGFIKLAVKKDN 416 Query: 487 NRVRIAVRDTGHGIDPKVIERVEANEMPG------NKIGLLNVHHRVKLLYGEGL----- 535 ++V I V D G G+ + + + + + IG+ N+ +R++L Y Sbjct: 417 DKVLIEVIDNGIGMSEEKVRAILSADNEDLSKRHVTGIGMHNIINRLRLFYNTSAIEDVI 476 Query: 536 HI-RRLEPGTEIAFYIPNQRTPVASQ 560 I ++ GT++ IP + + Sbjct: 477 EIDSKIGEGTKVTLKIPLMKGDKEND 502 >UniRef50_A8RPD3 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RPD3_9CLOT Length = 340 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 72/267 (26%), Positives = 120/267 (44%), Gaps = 28/267 (10%) Query: 322 AHQITSSLQEMAV-----GLSQIISTQLEVSRAE-QLREMANKAELRALQSKINPHFLFN 375 + I + MA + ++I + E + +A++AE+ ALQS+INPHFL+N Sbjct: 75 SEMIAQPERHMADLEGGRPIHRLIQYVKQSVENEYTSQMLASQAEIHALQSQINPHFLYN 134 Query: 376 ALNAISSSIRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARF 434 L+ I S + + + Q+ +LS RY+I E +K EL +K+Y+ I+ RF Sbjct: 135 TLDTIRSMAIIRDSEDIAQMAESLSMLFRYSISRPG-EMATLKDELDNVKNYLVIQGYRF 193 Query: 435 GDKLTVIYDIDEE--VNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIA 492 K I++E + +P L IQP++ENAI HG++ G G V++ R I Sbjct: 194 PGKFKYQQRIEDEELLQYKLPVLTIQPVIENAIHHGLETKVGGGQVSVYAYSTQERFIIR 253 Query: 493 VRDTGHGIDPKVIERVEANEMPG---------------NKIGLLNVHHRVKLLYGEGLHI 537 + D G G+ + ++ + G I L NV+ R+K YG+ I Sbjct: 254 IADNGMGMTEQQMDSLRERLSKGRFIYEQDRDLKKRGNTGIALPNVNQRIKFYYGDDYGI 313 Query: 538 ---RRLEPGTEIAFYIPNQRTPVASQA 561 GT + +P ++ Sbjct: 314 KVYSTAGIGTIVEIILPAAADSKGGES 340 >UniRef50_UPI0001C351A4 integral membrane sensor signal transduction histidine kinase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C351A4 Length = 589 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 65/247 (26%), Positives = 115/247 (46%), Gaps = 15/247 (6%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNA 379 Q+ M + + +E +E + E+ ALQ +INPHF++N L + Sbjct: 350 SEVRQMADVYNRMVDEIDSYVRQLIE------EQERGRRLEIEALQMQINPHFMYNTLAS 403 Query: 380 ISSSI-RLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKL 438 I N + A I L L+ I +E+I +++E+ ++ Y+ I Q R+GD + Sbjct: 404 IKYLTWENNTEKASDTINALIAILKKTI-GNMEEEITLREEIDLVRQYVFINQVRYGDSI 462 Query: 439 TVIYDI-DEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTG 497 V Y + +EE+ C +P L++QP +ENA H Q K G + I + + + + D G Sbjct: 463 EVEYFLAEEEMECMVPKLILQPFIENAFFHAFQNKKE-GKIRIFTKKQRDDLICEIIDEG 521 Query: 498 HGIDPKVIERVEANEMPG--NKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPN 552 G+ + + ++ IG+ NVH R++L+YGE + + GT ++ +P Sbjct: 522 DGMSQEETADLLNSDRRRHLTGIGIPNVHERLRLIYGEEYGVTIHSVIGTGTSVSLRLPY 581 Query: 553 QRTPVAS 559 V Sbjct: 582 HLKKVPK 588 >UniRef50_C0D8C9 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D8C9_9CLOT Length = 250 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 69/238 (28%), Positives = 114/238 (47%), Gaps = 18/238 (7%) Query: 332 MAVGLSQIISTQLEVSRAEQLRE-MANKAELRALQSKINPHFLFNALNAISSSIRL-NPD 389 MA L +I E EQ A +A+L++LQ +INPHFL+N L++I+ + + Sbjct: 1 MAYRLDNLIHKVYEAQIKEQKLIVEARQAQLQSLQMQINPHFLYNTLDSINWMALMEGNE 60 Query: 390 TARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDID-EEV 448 ++I L R +I +++E+ I+ Y+ +EQ RF +L D+D E + Sbjct: 61 EVSRMILALGHLFRNSINTSGI-YTTVREEIENIELYMFLEQVRFEGRLDFQVDVDGEVM 119 Query: 449 NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV 508 + +QPLVEN+I HGI+P KG + I++ G+++ I V D G G+ +V+ + Sbjct: 120 GETLLKHTLQPLVENSIKHGIEPYHIKGEIRIAITGEGDKLCIVVSDNGKGMKDEVLSSL 179 Query: 509 EA-----------NEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPN 552 + +G+ N+ R+ L YGE R E GT + P Sbjct: 180 QQMWANIETAQETRSDGRGGVGIRNIMKRLWLCYGEQASFVVSSRAEEGTRMELRFPR 237 >UniRef50_C6D660 Histidine kinase n=2 Tax=Bacteria RepID=C6D660_PAESJ Length = 623 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 75/291 (25%), Positives = 138/291 (47%), Gaps = 29/291 (9%) Query: 292 HRTPEIHSMLVIPLWEKGVVTGTLKI-YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAE 350 +P + + E G G + + + + + SS M + ++I S +E Sbjct: 331 ISSPLKLLIREMKQVELGNFRGAVNVKSFEEINSLVSSFNRMVHRIDELIERITLSSISE 390 Query: 351 QLREMANKAELRALQSKINPHFLFNALNAISSSI-RLNPDTARQLIFNLSRYLRYNIELK 409 AEL+ALQS++NPHFL+N L+ I + D ++I +LS RY+ + + Sbjct: 391 ------KNAELQALQSQVNPHFLYNTLDMIYWMLDERENDRLGRVILSLSHMFRYSSDWE 444 Query: 410 DDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDE-EVNCCIPSLLIQPLVENAIVHG 468 + + +++EL Q++ Y+ I + R +++ +D ++ +P + IQP++ENA+ G Sbjct: 445 EASKTTLRQELEQMRHYMTIIENRLVGRVSTEIQVDNIWLDAIVPKMTIQPVIENAVKSG 504 Query: 469 IQPCKGKGVVTIS--VAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGN---------- 516 ++P G++ +S E N +RI + D G GID + +++++A + Sbjct: 505 LEPLDRPGLLRVSTIADEEANELRIVIEDNGVGIDEEELKKLQAMLEDSSPGRNYNAAQQ 564 Query: 517 -----KIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQRTPVAS 559 IGL NVH R+ L+YGE + L GT + IP + Sbjct: 565 GRGRRGIGLPNVHRRIVLMYGEPYGLRITSELGKGTTVIIAIPLPARGGKT 615 >UniRef50_D2LUI0 Histidine kinase n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LUI0_BACS4 Length = 597 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 72/248 (29%), Positives = 118/248 (47%), Gaps = 12/248 (4%) Query: 320 CHAHQITSSLQEMAVGLSQIISTQL-EVSRAEQLREMANKAELRALQSKINPHFLFNALN 378 Q+++ M + +++ + + L + N+ +L+ L S+INPHFLFN L Sbjct: 351 DEIGQLSTEFNRMTKSIKELLEEIEHKNTEKRVLEKRQNQIKLKMLASQINPHFLFNTLE 410 Query: 379 AISSSIRL-NPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDK 437 I L ++ L + LR +IE+ + +K+E+ +K Y+ I+ RF ++ Sbjct: 411 TIRMKTLLSGEKEIAHIVKRLGKLLRSSIEVGGG-MVPLKQEMEMVKAYLEIQNFRFDER 469 Query: 438 LTVIYDIDEEVN-CCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDT 496 L ID + IP L+IQPLVENA++HG++ G V + G+ + ++V+D Sbjct: 470 LEYELKIDPKTEAIKIPPLIIQPLVENAVIHGLENKIEGGKVIVETRLIGDDMIVSVKDN 529 Query: 497 GHGIDPKVIERV-----EANEMPGNKIGLLNVHHRVKLLYGEGLHI---RRLEPGTEIAF 548 G GI K E + E N+IGL NVH R+ L Y + GT ++F Sbjct: 530 GVGISTKKKEEIFLSLTENTVEAENRIGLRNVHERILLTYKTSNGLVINSEQHKGTRVSF 589 Query: 549 YIPNQRTP 556 IP Sbjct: 590 SIPLNEDE 597 >UniRef50_C5EQ48 Signal transduction histidine kinase n=2 Tax=Clostridiales RepID=C5EQ48_9FIRM Length = 605 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 74/275 (26%), Positives = 130/275 (47%), Gaps = 19/275 (6%) Query: 291 AHRTPEIHSMLVIPLWEKGVVTGTLKIY-YCHAHQITSSLQEMAVGLSQIISTQLEVSRA 349 + P + I G T I + + +M+ + +++ +LE + Sbjct: 321 QIKKPIDRLVRHIGDVAAGDFTRDPDIEGEDEIGTVGKVVNDMSQQIDGLMAERLENEKE 380 Query: 350 EQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDT-ARQLIFNLSRYLRYNIEL 408 + + EL+ LQ++INPHFL+N L++I + ++ +++ LS L+ N+ Sbjct: 381 KGV------LELKMLQAQINPHFLYNTLDSIRWIAVIQKNSGIVKMVTALSGLLK-NMAK 433 Query: 409 KDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDID--EEVNCCIPSLLIQPLVENAIV 466 DE++ +++EL + DY+ IE+ ++ + + +D + +N + L +QPLVENAI Sbjct: 434 GFDEKVTLQRELDFLNDYVTIEKVKYVELFDLEVKVDNPKLLNAMVIKLTLQPLVENAIF 493 Query: 467 HGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMP-----GNKIGLL 521 +GI+P G + I E + I VRD G GI + + + N + IGL Sbjct: 494 NGIEPNGKHGTILIHAYEEKGCLLIQVRDDGRGIPKEKLAAILDNTEKVKGNTMSGIGLP 553 Query: 522 NVHHRVKLLYGEGLHI---RRLEPGTEIAFYIPNQ 553 NV R+KL YGE + TEI IP + Sbjct: 554 NVERRIKLNYGEQYGLTIESEEGKYTEITVKIPLE 588 >UniRef50_UPI0001C351CC multi-sensor signal transduction histidine kinase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C351CC Length = 277 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 65/259 (25%), Positives = 117/259 (45%), Gaps = 28/259 (10%) Query: 318 YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNAL 377 Q++ S MA L + Q+ ++ N+ ++ +Q+++NPHFL+N L Sbjct: 24 RNDEFGQLSESFNTMASELKTYMEMQVS------QQKKLNEVQIAMMQAQLNPHFLYNTL 77 Query: 378 NAISSSIRLNP-DTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGD 436 + + + N L L++ LR +I + + I +K+EL + Y I++ RF Sbjct: 78 DTMKWVAKANHIPEIATLAAKLAKILRTSIS--NAQFITLKEELELVDCYAEIQKIRFQG 135 Query: 437 KLTVIYDIDEEV-NCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRD 495 K Y++ EE+ C +P L++QP+VENA++HG++ C+ G + + R+ I V D Sbjct: 136 KFCFDYELPEELAGCVVPKLVVQPIVENAMIHGLKDCEE-GHILVRACSKEGRLFIEVMD 194 Query: 496 TGHGIDPKVIERVEANEMPG--------------NKIGLLNVHHRVKLLYGEGLHIRR-- 539 G GI +V+ + IG NV ++L YG + Sbjct: 195 DGCGISDEVLNHLNNRGAGAGVPEEGGEEALLRLGHIGFYNVDTIIRLHYGAEYGLSVCR 254 Query: 540 -LEPGTEIAFYIPNQRTPV 557 GT++ IP ++ Sbjct: 255 PEGGGTKVTIMIPVRQGEE 273 >UniRef50_C7IFK1 Putative sensor with HAMP domain n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IFK1_9CLOT Length = 626 Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats. Identities = 64/272 (23%), Positives = 130/272 (47%), Gaps = 19/272 (6%) Query: 293 RTPEIHSMLVIPLWEKGVVTGTLKI--YYCHAHQITSSLQEMAVGLSQIISTQLEVSRAE 350 + + ++ K I ++ + M + ++ + + Sbjct: 360 LSKPLKRLINTMNEVKRGNLSVSIIDNSTDEIGEVVGNFNTMLNEIKNLMESV------K 413 Query: 351 QLREMANKAELRALQSKINPHFLFNALNAISSSI-RLNPDTARQLIFNLSRYLRYNIELK 409 + +AE++ LQ++INPHFL N LN + L+ +L + L ++ K Sbjct: 414 LNEKQKREAEIKILQAQINPHFLSNTLNTVKWLAGAQKAHNIEALVSSLIKLLHVSM-GK 472 Query: 410 DDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHG 468 D+ I + +E+ IK YI I++ R+ DK V+++I+E+ ++ + LIQP+VENAI+HG Sbjct: 473 GDDFITMGEEVEYIKSYINIQEYRYYDKFRVVFEIEEDILDYKVLRFLIQPVVENAIIHG 532 Query: 469 IQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVE-----ANEMPGNKIGLLNV 523 I P +G+++I + + ++I V D G GI + + ++ N+ + IG+ NV Sbjct: 533 IGPMTEQGLISIKGFKYNDVLKIRVTDNGEGIPRERLCKILTVDDYENKSKFSGIGINNV 592 Query: 524 HHRVKLLYGEGLHI---RRLEPGTEIAFYIPN 552 + R+++ +G+ + + T + +P Sbjct: 593 NERIQINFGDEFGLHIESVPKLYTTVELTLPI 624 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.316 0.169 0.517 Lambda K H 0.267 0.0518 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,947,359,701 Number of Sequences: 3077464 Number of extensions: 219614365 Number of successful extensions: 1065820 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 6906 Number of HSP's successfully gapped in prelim test: 24080 Number of HSP's that attempted gapping in prelim test: 1013684 Number of HSP's gapped (non-prelim): 44277 length of query: 565 length of database: 1,040,396,356 effective HSP length: 134 effective length of query: 431 effective length of database: 628,016,180 effective search space: 270674973580 effective search space used: 270674973580 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.8 bits) S2: 97 (41.6 bits)