Phyre 2 alignment of P0AA93 with d1ul1x1

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Job Description | P0AA93
Confidence | 29.32% | Date | Thu Jan 5 11:12:15 GMT 2012
Rank | 122 | Aligned Residues | 24
% Identity | 21% | Template | d1ul1x1
SCOP info | SAM domain-like | 5' to 3' exonuclease, C-terminal subdomain | 5' to 3' exonuclease, C-terminal subdomain
Resolution | 2.90

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 494 | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | R | D | T | G | H | G | I | D | P | K | V | I | E | R | V | E | A | N | E | M | P | G | N | K | I | G | L | L | N | V | H | H | R | V | K | L | L | Y | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | D | Y | C | E | S | I | R | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | G | I | G | P | K | R | A | V | D | L | I | Q | K | H | K | S
Template Known Secondary structure |  |  | S | S | S |  |  |  | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 232 | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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