15/01/2012 06:40:24 : INFO  : Run start: Sun Jan 15 06:40:24 GMT 2012
15/01/2012 06:40:28 : INFO  : Initialised job
15/01/2012 06:40:29 : INFO  : Renaming log file 'phyre2_20120115_064023.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/4dfabfae8b7a6478/phyre_20120115_064023.log'
15/01/2012 06:40:30 : INFO  : Initialised job:
Sequence
>batch____
MHEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFST
WSGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSIL
AGCISGWINLKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILG
SVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIH
ADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSM
LVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAE
LRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKEL
YQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTI
SVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRRL
EPGTEIAFYIPNQRTPVASQATLLL

15/01/2012 06:40:31 : INFO  : Checked sequence
15/01/2012 06:40:33 : INFO  : Finding homologues with PSI-BLAST
15/01/2012 06:40:34 : INFO  : PSI-BLAST 3 iterations
15/01/2012 06:44:05 : INFO  : PSI-BLAST 5 iterations
15/01/2012 06:49:04 : INFO  : Finished PSI-BLAST
15/01/2012 06:49:06 : INFO  : Running Buildali to generate a3m file
15/01/2012 08:12:34 : INFO  : Converting to HMM
15/01/2012 08:12:56 : INFO  : Calibrating HMM
15/01/2012 08:13:19 : INFO  : Searching HMM database
15/01/2012 08:26:12 : INFO  : Finished buildali
15/01/2012 08:26:13 : INFO  : Predicting secondary structure
15/01/2012 08:26:20 : INFO  : Predicted secondary structure (PSI-Pred)
15/01/2012 08:26:21 : INFO  : Predicting Disordered regions
15/01/2012 08:26:24 : INFO  : Predicted Disorder (Disopred)
15/01/2012 08:26:25 : INFO  : Running memsat_svm check
15/01/2012 08:28:36 : INFO  : Globular protein
15/01/2012 08:28:36 : INFO  : Predicted Transmembrane (memsat_svm) ID '4dfabfae8b7a6478'
15/01/2012 08:28:37 : INFO  : Initialising fold library search
15/01/2012 08:28:39 : INFO  : Initialised search input
15/01/2012 08:28:41 : INFO  : Building Ensemble models
15/01/2012 08:28:43 : INFO  : Building hh.c2c2aA_.model.1.pdb
15/01/2012 08:28:54 : INFO  : Building hh.c2q8fA_.model.2.pdb
15/01/2012 08:29:03 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/4dfabfae8b7a6478/hh.c2q8fA_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/4dfabfae8b7a6478/c2q8fA_.2.pdb
15/01/2012 08:29:06 : INFO  : Building hh.c3d2rB_.model.3.pdb
15/01/2012 08:29:15 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/4dfabfae8b7a6478/hh.c3d2rB_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/4dfabfae8b7a6478/c3d2rB_.3.pdb
15/01/2012 08:29:18 : INFO  : Building hh.c1y8oA_.model.4.pdb
15/01/2012 08:29:28 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/4dfabfae8b7a6478/hh.c1y8oA_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/4dfabfae8b7a6478/c1y8oA_.4.pdb
15/01/2012 08:29:31 : INFO  : Building hh.c3d36B_.model.5.pdb
15/01/2012 08:29:39 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/4dfabfae8b7a6478/hh.c3d36B_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/4dfabfae8b7a6478/c3d36B_.5.pdb
15/01/2012 08:29:41 : INFO  : Building hh.c2bu8A_.model.6.pdb
15/01/2012 08:29:49 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/4dfabfae8b7a6478/hh.c2bu8A_.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/4dfabfae8b7a6478/c2bu8A_.6.pdb
15/01/2012 08:29:52 : INFO  : Building hh.c3a0rA_.model.7.pdb
15/01/2012 08:30:01 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/4dfabfae8b7a6478/hh.c3a0rA_.model.7.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/4dfabfae8b7a6478/c3a0rA_.8.pdb
15/01/2012 08:30:04 : INFO  : Building hh.c1vhmB_.model.8.pdb
15/01/2012 08:30:13 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/4dfabfae8b7a6478/hh.c1vhmB_.model.8.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/4dfabfae8b7a6478/c1vhmB_.81.pdb
15/01/2012 08:30:16 : INFO  : Building hh.c3mf0A_.model.9.pdb
15/01/2012 08:30:24 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/4dfabfae8b7a6478/hh.c3mf0A_.model.9.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/4dfabfae8b7a6478/c3mf0A_.103.pdb
15/01/2012 08:30:27 : INFO  : Building c2c2aA_.1.pdb
15/01/2012 08:30:36 : INFO  : Building c2q8fA_.2.pdb
15/01/2012 08:30:46 : INFO  : Building c3d2rB_.3.pdb
15/01/2012 08:30:56 : INFO  : Building c1y8oA_.4.pdb
15/01/2012 08:31:06 : INFO  : Building c3d36B_.5.pdb
15/01/2012 08:31:15 : INFO  : Building c2bu8A_.6.pdb
15/01/2012 08:31:25 : INFO  : Building c1gjvA_.7.pdb
15/01/2012 08:31:35 : INFO  : Building c3a0rA_.8.pdb
15/01/2012 08:31:45 : INFO  : Building d2c2aa2.9.pdb
15/01/2012 08:31:55 : INFO  : Building c1b3qA_.10.pdb
15/01/2012 08:32:05 : INFO  : Building c3a0tA_.11.pdb
15/01/2012 08:32:14 : INFO  : Building d1gkza2.12.pdb
15/01/2012 08:32:24 : INFO  : Building d1id0a_.13.pdb
15/01/2012 08:32:34 : INFO  : Building d1jm6a2.14.pdb
15/01/2012 08:32:44 : INFO  : Building c2ch4A_.15.pdb
15/01/2012 08:32:54 : INFO  : Building d1i58a_.16.pdb
15/01/2012 08:33:04 : INFO  : Building d1bxda_.17.pdb
15/01/2012 08:33:14 : INFO  : Building d1ysra1.18.pdb
15/01/2012 08:33:25 : INFO  : Building c3jz3B_.19.pdb
15/01/2012 08:33:36 : INFO  : Building c3gieA_.20.pdb
15/01/2012 08:35:32 : INFO  : Finished HH model building
15/01/2012 08:35:33 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
15/01/2012 08:36:49 : INFO  : html domain output complete ID '4dfabfae8b7a6478'
15/01/2012 09:20:39 : INFO  : Run end  : Sun Jan 15 09:20:39 GMT 2012
