10/01/2012 04:10:22 : INFO  : Run start: Tue Jan 10 04:10:22 GMT 2012
10/01/2012 04:10:25 : INFO  : Initialised job
10/01/2012 04:10:27 : INFO  : Renaming log file 'phyre2_20120110_041021.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/4d262b57c816c9f8/phyre_20120110_041021.log'
10/01/2012 04:10:27 : INFO  : Initialised job:
Sequence
>batch____
MMNFNNVFRWHLPFLFLVLLTFRAAAADTLLILGDSLSAGYRMSASAAWPALLNDKWQSK
TSVVNASISGDTSQQGLARLPALLKQHQPRWVLVELGGNDGLRGFQPQQTEQTLRQILQD
VKAANAEPLLMQIRLPANYGRRYNEAFSAIYPKLAKEFDVPLLPFFMEEVYLKPQWMQDD
GIHPNRDAQPFIADWMAKQLQPLVNHDS

10/01/2012 04:10:28 : INFO  : Checked sequence
10/01/2012 04:10:30 : INFO  : Finding homologues with PSI-BLAST
10/01/2012 04:10:31 : INFO  : PSI-BLAST 3 iterations
10/01/2012 04:12:01 : INFO  : PSI-BLAST 5 iterations
10/01/2012 04:13:58 : INFO  : Finished PSI-BLAST
10/01/2012 04:14:00 : INFO  : Running Buildali to generate a3m file
10/01/2012 04:26:48 : INFO  : Converting to HMM
10/01/2012 04:26:51 : INFO  : Calibrating HMM
10/01/2012 04:27:00 : INFO  : Searching HMM database
10/01/2012 04:31:34 : INFO  : Finished buildali
10/01/2012 04:31:35 : INFO  : Predicting secondary structure
10/01/2012 04:31:40 : INFO  : Predicted secondary structure (PSI-Pred)
10/01/2012 04:31:41 : INFO  : Predicting Disordered regions
10/01/2012 04:31:43 : INFO  : Predicted Disorder (Disopred)
10/01/2012 04:31:44 : INFO  : Running memsat_svm check
10/01/2012 04:34:47 : INFO  : Globular protein
10/01/2012 04:34:48 : INFO  : Predicted Transmembrane (memsat_svm) ID '4d262b57c816c9f8'
10/01/2012 04:34:49 : INFO  : Initialising fold library search
10/01/2012 04:34:51 : INFO  : Initialised search input
10/01/2012 04:34:52 : INFO  : Building Ensemble models
10/01/2012 04:34:55 : INFO  : Building hh.d1jrla_.model.1.pdb
10/01/2012 04:35:07 : INFO  : Building d1jrla_.1.pdb
10/01/2012 04:35:16 : INFO  : Building c3hp4A_.2.pdb
10/01/2012 04:35:23 : INFO  : Building c2o14A_.3.pdb
10/01/2012 04:35:31 : INFO  : Building c3milA_.4.pdb
10/01/2012 04:35:38 : INFO  : Building c3p94A_.5.pdb
10/01/2012 04:35:46 : INFO  : Building c3rjtA_.6.pdb
10/01/2012 04:35:53 : INFO  : Building d1yzfa1.7.pdb
10/01/2012 04:36:02 : INFO  : Building c2vptA_.8.pdb
10/01/2012 04:36:11 : INFO  : Building d3bzwa1.9.pdb
10/01/2012 04:36:19 : INFO  : Building c3bzwA_.10.pdb
10/01/2012 04:36:27 : INFO  : Building c2waoA_.11.pdb
10/01/2012 04:36:35 : INFO  : Building d1k7ca_.12.pdb
10/01/2012 04:36:42 : INFO  : Building c2waaA_.13.pdb
10/01/2012 04:36:49 : INFO  : Building d2o14a2.14.pdb
10/01/2012 04:36:56 : INFO  : Building d3dc7a1.15.pdb
10/01/2012 04:37:05 : INFO  : Building c3dc7B_.16.pdb
10/01/2012 04:37:13 : INFO  : Building d1vjga_.17.pdb
10/01/2012 04:37:21 : INFO  : Building d1es9a_.18.pdb
10/01/2012 04:37:28 : INFO  : Building d1fxwf_.19.pdb
10/01/2012 04:37:36 : INFO  : Building c2q0qC_.20.pdb
10/01/2012 04:37:53 : INFO  : Finished HH model building
10/01/2012 04:37:53 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
10/01/2012 04:38:35 : INFO  : html domain output complete ID '4d262b57c816c9f8'
10/01/2012 05:27:58 : INFO  : Run end  : Tue Jan 10 05:27:57 GMT 2012
