 |
| Job Description | P0ABQ0 | | Confidence | 95.12% | Date | Wed Jan 25 15:20:22 GMT 2012 |
| Rank | 236 | Aligned Residues | 71 |
| % Identity | 20% | Template | c2c20D_ |
| PDB info |
PDB header:isomerase | Chain: D: PDB Molecule:udp-glucose 4-epimerase; |
PDBTitle: crystal structure of udp-glucose 4-epimerase
|
| Resolution | 2.7 Å |
|
 |
|   |   |
190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | |
|
|
. | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
| . | . | . |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
N | I | M | I | T | A | G | P | T | R | E | P | L | D | P | V | R | Y | I | S | N | H | S | S | G | K | M | G | F | A | I | A | A | A | A | A | R | R | G | A | N | V | T | L | V | S | G | . |
. |
. |
P | V | S | L | P | T | P | P | F | V | K | R | V | D | V | M | T | A | L | E | M | E | A | A | V | N | A | S | V | Q |
| Query Conservation |   |
  |
|
|
|
|
|
|   |
|   |
|   |
|
|   |
|
|   |
|
|
|   |
|
|
|
|   |
|   |   |
|
|   |   |   |   |   |   |
|
|   |
|   |
|
|   |
| . | . | . |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|   |
|   | . | . |   |   |
|   |   |   |   |   |
| Template Sequence |   |
S | I | L | I | C | G | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | G | Y | I | G | S | H | A | V | K | K | L | V | D | E | G | L | S | V | V | V | V | D | N | L | Q | T | G | H | E | D | A | I | T | E | G | A | K | F | Y | N | G | D | L | R | D | K | . |
. |
A | F | L | R | D | V | F | T |
| Template Known Secondary structure |   |
 |  |  |  |  | T | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |
|
| S | S | S |
| G | G | G | S |
| S | S | S |  |  |  |  |
|
| T | T |
|  | . | . |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  | . | . |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
3 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | |
|
. | . | . | 60 | . | . | . | . |
|   |
|   |   |
267 | . | . | 270 | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
Q | Q | N | I | F | I | G | C | A | A | V | A |
| Query Conservation |   |
  |   |
|   |   |
|   |
|
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
| Template Sequence |   |
Q | E | N | I | E | A | V | M | H | F | A | A |
| Template Known Secondary structure |   |
T | S |
|  |  |  |  |  |  |
|
|
|
| Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
65 | . | . | . | . | 70 | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|