130 c1vmaA_ Probab=97.89   E-value=9.3e-05  Score=49.72  Aligned_columns=130  Identities=14%

Q ss_pred             CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHH----------------CCCHHHHHH
Q ss_conf             1666682689779986489999999999973067996663188999999999973----------------131689998
Q batch____       161 PGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKPNAKVVYMHSERFVQDMVKALQ----------------NNAIEEFKR  224 (467)
Q Consensus       161 ~~~~~~~lll~G~~G~GKT~La~aIa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~f~~  224 (467)
                      +....+.+.+.||+|+|||+.+.-+|..+...  +.++..+++..|..--+.+++                .......++
T Consensus        88 ~~~~~~vi~~~Gp~G~GKTTt~aklA~~~~~~--g~~v~li~~D~~R~gA~eQL~~~a~~~~v~~~~~~~~~~~~~~~~~  165 (294)
T c1vmaA_          88 PPEPPFVIMVVGVNGTGKTTSCGKLAKMFVDE--GKSVVLAAADTFRAAAIEQLKIWGERVGATVISHSEGADPAAVAFD  165 (294)
T ss_dssp             CSSSCEEEEEECCTTSSHHHHHHHHHHHHHHT--TCCEEEEEECTTCHHHHHHHHHHHHHHTCEEECCSTTCCHHHHHHH
T ss_pred             CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHC--CCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHH
T ss_conf             57896699998068876024899999999967--9948999758768647999999997619828974883698999999


Q ss_pred             -----HHHCCCEEEECCCHHCCCCHHHHHHHHHHHHHHH------HCCCEEEEEECCCHHHHHHHHHHHHHHHHCCEEE
Q ss_conf             -----5207992886352102473368999999999999------6598089996178012011004431000010130
Q batch____       225 -----YYRSVDALLIDDIQFFANKERSQEEFFHTFNALL------EGNQQIILTSDRYPKEINGVEDRLKSRFGWGLTV  292 (467)
Q Consensus       225 -----~~~~~~vL~iDei~~l~~~~~~q~~l~~~~~~~~------~~~~~ivi~~~~~p~~~~~l~~~l~sR~~~~l~~  292 (467)
                           ..++.|+++||-.+..........++-.+.....      .....+|+.++..+..+.....+...---.++++
T Consensus       166 ~~~~~~~~~~d~IlIDTaGr~~~d~~~~~el~~~~~~~~~~~~~~p~~~~LVl~a~~~~~~~~~~~~~~~~~~~~~iIl  244 (294)
T c1vmaA_         166 AVAHALARNKDVVIIDTAGRLHTKKNLMEELRKVHRVVKKKIPDAPHETLLVIDATTGQNGLVQAKIFKEAVNVTGIIL  244 (294)
T ss_dssp             HHHHHHHTTCSEEEEEECCCCSCHHHHHHHHHHHHHHGGGTCTTCCSEEEEEEEGGGHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             HHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEE
T ss_conf             9999997799899981888987857999999999999630356688539998114687899999999963089976999