71 c1nsfA_ Probab=99.62   E-value=5.5e-15  Score=116.08  Aligned_columns=183  Identities=14%

Q ss_pred             HHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHH-HHHHCCCHHHHHHHH
Q ss_conf             9999999999852166668268977998648999999999997306799666318899999999-997313168999852
Q batch____       148 QLARAAARQVADNPGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKPNAKVVYMHSERFVQDMV-KALQNNAIEEFKRYY  226 (467)
Q Consensus       148 ~~a~~~~~~~~~~~~~~~~~lll~G~~G~GKT~La~aIa~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~f~~~~  226 (467)
                      +........+.+....+..++|||||||||||+||++||+++     +.+++++++.++..... +...+.....|....
T Consensus        31 ~~~~~~~~~~~~~~~~~~~~iLL~GppGtGKT~la~~ia~~~-----~~~~i~i~~~~~~~~~~~~~~~~~~~~~f~~a~  105 (247)
T c1nsfA_          31 DDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEES-----NFPFIKICSPDKMIGFSETAKCQAMKKIFDDAY  105 (247)
T ss_dssp             HHHHHHHHHHHHCSSCSEEEEEEECSTTSSHHHHHHHHHHHH-----CCSEEEEECGGGSTTCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHC-----CCCEEEEECHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf             999999999840488887617997288631899999999971-----998999845677102200126889999999998


Q ss_pred             HCC-CEEEECCCHHCCCCHHH--------HHHHHHHHHHHHHCCC-EEEEEECCCHHHHHHHHHHHHHHHHCCEEECCCC
Q ss_conf             079-92886352102473368--------9999999999996598-0899961780120110044310000101303779
Q batch____       227 RSV-DALLIDDIQFFANKERS--------QEEFFHTFNALLEGNQ-QIILTSDRYPKEINGVEDRLKSRFGWGLTVAIEP  296 (467)
Q Consensus       227 ~~~-~vL~iDei~~l~~~~~~--------q~~l~~~~~~~~~~~~-~ivi~~~~~p~~~~~l~~~l~sR~~~~l~~~i~~  296 (467)
                      +.. .+++|||||.+.++...        .+.++..++.....+. .+++++++.|..+.  ...+.+||..  .+.+..
T Consensus       106 ~~~p~ii~lDEid~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~vi~ttn~~~~l~--~~~l~~rf~~--~i~~p~  181 (247)
T c1nsfA_         106 KSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQ--EMEMLNAFST--TIHVPN  181 (247)
T ss_dssp             TSSEEEEEECCHHHHTTCBTTTTBCCHHHHHHHHHHTTCCCSTTCEEEEEEEESCHHHHH--HTTGGGTSSE--EEECCC
T ss_pred             HCCCCEEEECHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHH--HHHHCCCCCE--EEEECC
T ss_conf             319978981016772101664025789999999985115676886178841447777622--0253173312--886079


Q ss_pred             CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC-----CHHHHHHHHHHH
Q ss_conf             89899999999999872889998999999996799-----888999999999
Q batch____       297 PELETRVAILMKKADENDIRLPGEVAFFIAKRLRS-----NVRELEGALNRV  343 (467)
Q Consensus       297 P~~~~r~~il~~~~~~~~i~~~~e~l~~la~~~~~-----~vR~L~~~l~~l  343 (467)
                      |+.+.+...+......    .++..++.++..+.+     ++|+|.++++..
T Consensus       182 ~~~~~~i~~~l~~~~~----~~~~~~~~ia~~~~~~~~~~~ir~l~~~~e~a  229 (247)
T c1nsfA_         182 IATGEQLLEALELLGN----FKDKERTTIAQQVKGKKVWIGIKKLLMLIEMS  229 (247)
T ss_dssp             EEEHHHHHHHHHHHTC----SCHHHHHHHHHHHTTSEEEECHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHCC----CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
T ss_conf             7654689999996137----98456999999962988999989999999999