9 c1in8A_ Probab=99.93   E-value=2.8e-22  Score=163.38  Aligned_columns=265  Identities=23%

Q ss_pred             CCHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHC
Q ss_conf             31000258416999999999985216666826897799864899999999999730679966631889999999999731
Q batch____       137 TFDNFVEGKSNQLARAAARQVADNPGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKPNAKVVYMHSERFVQDMVKALQN  216 (467)
Q Consensus       137 tFd~~~~g~~n~~a~~~~~~~~~~~~~~~~~lll~G~~G~GKT~La~aIa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (467)
                      +|++|++.+........+...+...+...++++||||||||||++|++||+++     +.++.++....+......    
T Consensus         7 ~~~d~iG~e~~~~~L~~~i~~~~~~~~~~~~ill~GppGtGKT~la~~ia~~l-----~~~~~~i~~~~~~~~~~~----   77 (298)
T c1in8A_           7 SLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIASEL-----QTNIHVTSGPVLVKQGDM----   77 (298)
T ss_dssp             SGGGCCSCHHHHHHHHHHHHHHHHHTCCCCCEEEESSTTSSHHHHHHHHHHHH-----TCCEEEEETTTCCSHHHH----
T ss_pred             CHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHC-----CCCEEEEECCCCCCCHHH----
T ss_conf             97781270999999999999986338888857998698898889999999970-----997999941553320124----


Q ss_pred             CCHHHHHHHHHCCCEEEECCCHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCEEECCCC
Q ss_conf             31689998520799288635210247336899999999999965980899961780120110044310000101303779
Q batch____       217 NAIEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEINGVEDRLKSRFGWGLTVAIEP  296 (467)
Q Consensus       217 ~~~~~f~~~~~~~~vL~iDei~~l~~~~~~q~~l~~~~~~~~~~~~~ivi~~~~~p~~~~~l~~~l~sR~~~~l~~~i~~  296 (467)
                         ......+....++++||++.+.  ...++.++..++.........++.......  ..+..+..+++..  .+.+.+
T Consensus        78 ---~~~~~~~~~~~il~~dei~~l~--~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~  148 (298)
T c1in8A_          78 ---AAILTSLERGDVLFIDEIHRLN--KAVEELLYSAIEDFQIDIQPFTLVGATVRS--GLLSSPLRSRFGI--ILELDF  148 (298)
T ss_dssp             ---HHHHHTCCTTCEEEEETGGGCC--HHHHHHHHHHHHHSCCCCCCCEEEEEESCG--GGSCHHHHTTCSE--EEECCC
T ss_pred             ---HHHHHHHCCCCEEEEEEHHHCC--HHHHHHHHHHHHCCCCCCCEEEECCCCCCH--HHCCCHHHHHHHH--HCCCCC
T ss_conf             ---5668851379989994236769--899999999970553344406652654585--6314643323443--113678


Q ss_pred             CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHCCCCCCCC
Q ss_conf             898999999999998728899989999999967998889999999999998625996-8988999999975024435789
Q batch____       297 PELETRVAILMKKADENDIRLPGEVAFFIAKRLRSNVRELEGALNRVIANANFTGRA-ITIDFVREALRDLLALQEKLVT  375 (467)
Q Consensus       297 P~~~~r~~il~~~~~~~~i~~~~e~l~~la~~~~~~vR~L~~~l~~l~~~a~~~~~~-it~~~v~~~l~~~~~~~~~~~~  375 (467)
                      |+.+++..+++..+.+.++.++++++++|+.++.||+|++.+.+.++..++...+.. |+.+++.+++............
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~R~~~~ll~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~  228 (298)
T c1in8A_         149 YTVKELKEIIKRAASLMDVEIEDAAAEMIAKRSRGTPRIAIRLTKRVRDMLTVVKADRINTDIVLKTMEVLNIDDEGLDE  228 (298)
T ss_dssp             CCHHHHHHHHHHHHHHTTCCBCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTCSSBCHHHHHHHHHHHTCCTTCCCH
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHH
T ss_conf             98999999999999982985588999999998399989999999999999985298876989999999751255101114


Q ss_pred             HHH-HHHHHHHHHCCCHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf             899-9999999849989990367753015211067999989870688889999847987999999999999997
Q batch____       376 IDN-IQKTVAEYYKIKVADLLSKRRSRSVARPRQMAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLR  448 (467)
Q Consensus       376 ~~~-i~~~v~~~~~i~~~~l~~~~r~~~i~~~R~~amyl~r~~~~~s~~~ig~~fg~rdhstv~~~~~ki~~~~  448 (467)
                      .+. +.+.+.+.|+                            ....++..|+..+ +.+++|+...++......
T Consensus       229 ~~~~~~~~l~~~~~----------------------------~~~~~~~~ia~~l-~~~~~~~~~~~~~~~~~~  273 (298)
T c1in8A_         229 FDRKILKTIIEIYR----------------------------GGPVGLNALAASL-GVEADTLSEVYEPYLLQA  273 (298)
T ss_dssp             HHHHHHHHHHHHST----------------------------TCCBCHHHHHHHH-TSCHHHHHHTTHHHHHHT
T ss_pred             HHHHHHHHHHHHHC----------------------------CCHHHHHHHHHHC-CCCHHHHHHHHHHHHHHH
T ss_conf             68999999999817----------------------------6954799999985-999899999976579885