BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (200 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P37640 Putative HTH-type transcriptional regulator yhjB... 416 e-115 UniRef50_UPI0001C342BD hypothetical protein EcanA3_16147 n=1 Tax... 173 3e-42 UniRef50_C9XUR7 Putative HTH-type transcriptional regulator yhjB... 162 6e-39 UniRef50_C6DKK0 Two component transcriptional regulator, LuxR fa... 137 2e-31 UniRef50_Q988F5 Two component system response regulator n=1 Tax=... 91 3e-17 UniRef50_A1S7C5 Response regulator receiver protein n=5 Tax=Prot... 89 8e-17 UniRef50_C6BJ98 Two component transcriptional regulator, LuxR fa... 88 1e-16 UniRef50_Q2SQ58 Response regulator containing a CheY-like receiv... 88 1e-16 UniRef50_B2SU06 Two-component system regulatory protein n=73 Tax... 88 2e-16 UniRef50_B1YYJ9 Transcriptional regulator, LuxR family n=4 Tax=B... 86 7e-16 UniRef50_B6IU89 Glycerol metabolism activator AgmR n=1 Tax=Rhodo... 83 5e-15 UniRef50_Q1YMP2 Two component response regulator n=1 Tax=Auranti... 82 2e-14 UniRef50_B0RP06 Transcriptional regulator, LuxR family n=22 Tax=... 81 3e-14 UniRef50_B8CLF7 Regulatory protein, LuxR:Response regulator rece... 80 3e-14 UniRef50_A6FJH9 DNA-binding response regulator, LuxR family n=1 ... 80 4e-14 UniRef50_Q07YA8 Two component transcriptional regulator, LuxR fa... 80 5e-14 UniRef50_C5SGD8 Two component transcriptional regulator, LuxR fa... 79 7e-14 UniRef50_B8EIF2 Two component transcriptional regulator, LuxR fa... 79 9e-14 UniRef50_C5CKC0 Two component transcriptional regulator, LuxR fa... 79 1e-13 UniRef50_A4TWP7 Response regulator containing a CheY-like receiv... 78 2e-13 UniRef50_B1XWH3 Two component transcriptional regulator, LuxR fa... 78 2e-13 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 77 3e-13 UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=P... 77 4e-13 UniRef50_Q48AG6 DNA-binding response regulator, LuxR family n=4 ... 76 9e-13 UniRef50_Q8EC39 DNA-binding response regulator, LuxR family n=1 ... 75 1e-12 UniRef50_UPI0000384741 COG2197: Response regulator containing a ... 75 1e-12 UniRef50_C5V3Z0 Two component transcriptional regulator, LuxR fa... 75 1e-12 UniRef50_Q1QZ85 Two component transcriptional regulator, LuxR fa... 75 2e-12 UniRef50_B5IX99 Response regulator receiver domain protein n=2 T... 75 2e-12 UniRef50_Q5QVF9 Response regulator, LuxR family (CheY, HTH domai... 74 2e-12 UniRef50_Q1GI23 Two component transcriptional regulator, LuxR fa... 74 3e-12 UniRef50_Q0FFK6 DNA-binding response regulator, LuxR family prot... 74 3e-12 UniRef50_A5V5F9 Two component transcriptional regulator, LuxR fa... 73 5e-12 UniRef50_Q1NJX6 Regulatory protein, LuxR:Response regulator rece... 73 6e-12 UniRef50_Q2W650 Response regulator containing a CheY-like receiv... 72 1e-11 UniRef50_Q4KHB4 DNA-binding response regulator, LuxR family n=3 ... 71 2e-11 UniRef50_Q0VLI2 Transcription regulator, putative n=1 Tax=Alcani... 71 2e-11 UniRef50_Q0AL13 Two component transcriptional regulator, LuxR fa... 71 2e-11 UniRef50_Q1ZGB3 Nitrate/nitrite response regulator protein NarP ... 70 3e-11 UniRef50_A3U430 DNA-binding response regulator, LuxR family prot... 70 3e-11 UniRef50_A4YN74 Two-component transcriptional regulator, LuxR fa... 70 4e-11 UniRef50_Q5QUH5 Response regulator, LuxR family (CheY, HTH domai... 70 4e-11 UniRef50_A3Y678 Response regulator n=1 Tax=Marinomonas sp. MED12... 70 4e-11 UniRef50_C6P401 Two component transcriptional regulator, LuxR fa... 70 5e-11 UniRef50_Q15NL1 Two component transcriptional regulator, LuxR fa... 70 5e-11 UniRef50_A6V8B9 DNA-binding response regulator, LuxR family n=9 ... 70 6e-11 UniRef50_A4TWP9 Response regulator containing a CheY-like receiv... 70 6e-11 UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermop... 70 6e-11 UniRef50_Q16BU6 Transcriptional regulator, LuxR family, putative... 69 7e-11 UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ... 69 9e-11 UniRef50_B1L0K3 DNA-binding response regulator, LuxR family n=22... 69 9e-11 UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR fa... 69 9e-11 UniRef50_B9MPQ9 Two component transcriptional regulator, LuxR fa... 69 9e-11 UniRef50_A3V1C5 Two component transcriptional regulator, LuxR fa... 69 1e-10 UniRef50_C4RI73 Two-component system response regulator n=6 Tax=... 69 1e-10 UniRef50_B2J2N1 Two component transcriptional regulator, LuxR fa... 69 1e-10 UniRef50_C9RXQ8 Two component transcriptional regulator, LuxR fa... 69 1e-10 UniRef50_A4BAF0 Two-component system, response regulator n=1 Tax... 68 1e-10 UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa... 68 2e-10 UniRef50_C1I7X4 Two-component system response regulator n=1 Tax=... 68 2e-10 UniRef50_C3K952 Putative two-component system, response regulato... 68 2e-10 UniRef50_B6IS43 Transcriptional regulator, LuxR family protein n... 68 2e-10 UniRef50_P94439 Uncharacterized transcriptional regulatory prote... 67 2e-10 UniRef50_C6QEY3 Two component transcriptional regulator, LuxR fa... 67 3e-10 UniRef50_A7HTS6 Two component transcriptional regulator, LuxR fa... 67 3e-10 UniRef50_B9QY19 Sigma-70, region 4 family n=2 Tax=Alphaproteobac... 67 3e-10 UniRef50_A4VUX0 DNA-binding response regulator, putative n=5 Tax... 67 3e-10 UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR fa... 67 3e-10 UniRef50_A9VYG0 Regulatory protein LuxR n=7 Tax=Alphaproteobacte... 67 3e-10 UniRef50_A3WDJ9 Two-component response regulator n=1 Tax=Erythro... 67 3e-10 UniRef50_D2S858 Two component transcriptional regulator, LuxR fa... 67 3e-10 UniRef50_A8MF72 Two component transcriptional regulator, LuxR fa... 67 4e-10 UniRef50_A6UGI4 Two component transcriptional regulator, LuxR fa... 67 4e-10 UniRef50_B9YZJ3 Two component transcriptional regulator, LuxR fa... 67 5e-10 UniRef50_B7A7I0 Two component transcriptional regulator, LuxR fa... 67 5e-10 UniRef50_UPI0001C318AF two component transcriptional regulator, ... 67 5e-10 UniRef50_C4ZEG3 Two-component response regulator (Extracellular ... 66 5e-10 UniRef50_B9XH34 Two component transcriptional regulator, LuxR fa... 66 5e-10 UniRef50_Q15YI7 Two component transcriptional regulator, LuxR fa... 66 6e-10 UniRef50_A0YDX3 Two Component Transcriptional Regulator, LuxR fa... 66 6e-10 UniRef50_B9JKP6 Two-component response regulator protein n=2 Tax... 66 7e-10 UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa... 66 7e-10 UniRef50_A6F5J0 Response regulator containing a CheY-like receiv... 66 7e-10 UniRef50_UPI0000E116E2 Response regulator, LuxR family (CheY, HT... 66 8e-10 UniRef50_Q89GQ5 Two-component response regulator n=1 Tax=Bradyrh... 66 8e-10 UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti... 66 8e-10 UniRef50_Q3SFT3 Two Component Transcriptional Regulator, LuxR fa... 66 8e-10 UniRef50_B5JVB0 Two Component Transcriptional Regulator, LuxR fa... 65 9e-10 UniRef50_C1XS11 Response regulator containing a CheY-like receiv... 65 9e-10 UniRef50_B5JNS6 Sigma-70, region 4 family n=1 Tax=Verrucomicrobi... 65 1e-09 UniRef50_C6CZA5 Two component transcriptional regulator, LuxR fa... 65 1e-09 UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibac... 65 1e-09 UniRef50_A0M543 Two-component system response regulator n=3 Tax=... 65 1e-09 UniRef50_B7XNB9 Transcriptional regulatory protein n=2 Tax=cellu... 65 1e-09 UniRef50_Q1D523 DNA-binding response regulator, LuxR family n=2 ... 65 2e-09 UniRef50_B8IGA6 Two component transcriptional regulator, LuxR fa... 65 2e-09 UniRef50_C6VZM4 Two component transcriptional regulator, LuxR fa... 65 2e-09 UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 ... 65 2e-09 UniRef50_B2A8K6 Two component transcriptional regulator, LuxR fa... 65 2e-09 UniRef50_C6PMI5 Transcriptional regulator, LuxR family n=1 Tax=C... 64 2e-09 UniRef50_O07528 Uncharacterized transcriptional regulatory prote... 64 2e-09 UniRef50_B8FX94 Two component transcriptional regulator, LuxR fa... 64 3e-09 UniRef50_A5FIE9 Two component transcriptional regulator, LuxR fa... 64 3e-09 UniRef50_A3VVX9 DNA-binding response regulator, LuxR family prot... 64 3e-09 UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR fa... 64 3e-09 UniRef50_B6INK4 Glycerol metabolism activator AgmR n=3 Tax=Rhodo... 64 3e-09 UniRef50_Q0ZKD3 Putative uncharacterized protein n=1 Tax=Coryneb... 64 3e-09 UniRef50_C4RMY6 Two-component system response regulator n=5 Tax=... 64 3e-09 UniRef50_A4X066 Two component transcriptional regulator, LuxR fa... 64 3e-09 UniRef50_Q04VJ6 Receiver component of a two-component response r... 64 4e-09 UniRef50_B0C756 Two-component transcriptional regulator, LuxR fa... 64 4e-09 UniRef50_C5V5K1 Two component transcriptional regulator, LuxR fa... 64 4e-09 UniRef50_Q3Z6T8 DNA-binding response regulator, LuxR family n=4 ... 64 4e-09 UniRef50_Q15UD9 Two component transcriptional regulator, LuxR fa... 64 4e-09 UniRef50_Q1AUM8 Two component transcriptional regulator, LuxR fa... 64 4e-09 UniRef50_Q2W0D2 Response regulator containing a CheY-like receiv... 63 6e-09 UniRef50_B5WAQ1 Two component transcriptional regulator, LuxR fa... 63 6e-09 UniRef50_A3W9G2 Transcriptional regulator, LuxR family protein n... 63 6e-09 UniRef50_B8KRZ2 Two component transcriptional regulator, LuxR fa... 63 6e-09 UniRef50_B9JNF6 Transcriptional regulator protein n=1 Tax=Agroba... 63 7e-09 UniRef50_B1ZKW0 Two component transcriptional regulator, LuxR fa... 63 7e-09 UniRef50_C4KCK2 Two component transcriptional regulator, LuxR fa... 63 7e-09 UniRef50_A4JJ97 Two component transcriptional regulator, LuxR fa... 62 8e-09 UniRef50_B4DBM9 Two component transcriptional regulator, LuxR fa... 62 8e-09 UniRef50_P29369 Glycerol metabolism activator n=32 Tax=Gammaprot... 62 9e-09 UniRef50_B8IQC8 Two component transcriptional regulator, LuxR fa... 62 9e-09 UniRef50_Q2RR45 Two component transcriptional regulator, LuxR fa... 62 9e-09 UniRef50_B2IZX5 Two component transcriptional regulator, LuxR fa... 62 9e-09 UniRef50_A6YEH0 CmnR n=1 Tax=Saccharothrix mutabilis subsp. capr... 62 1e-08 UniRef50_A1R238 Putative Transcriptional regulator, LuxR-family ... 62 1e-08 UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. ora... 62 1e-08 UniRef50_Q7NN43 Two-component response regulator n=2 Tax=Gloeoba... 62 1e-08 UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC... 62 1e-08 UniRef50_B8IJA2 Two component transcriptional regulator, LuxR fa... 62 1e-08 UniRef50_C8WQM5 GAF modulated transcriptional regulator, LuxR fa... 62 1e-08 UniRef50_B6IS42 Transcriptional regulator, LuxR family protein n... 62 1e-08 UniRef50_C5BJQ2 Regulator in two-component regulatory system n=1... 62 1e-08 UniRef50_B8G137 Two component transcriptional regulator, LuxR fa... 62 1e-08 UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 T... 62 1e-08 UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococc... 62 1e-08 UniRef50_C3KN90 Two component transcriptional regulator, LuxR fa... 62 1e-08 UniRef50_B3JKG3 Putative uncharacterized protein n=2 Tax=Bactero... 62 1e-08 UniRef50_A9AZR3 Two component transcriptional regulator, LuxR fa... 62 1e-08 UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa... 62 2e-08 UniRef50_Q1MYT3 Response regulator containing a CheY-like receiv... 62 2e-08 UniRef50_A4U0R2 DNA-binding response regulator, LuxR family n=1 ... 62 2e-08 UniRef50_C6XJS4 Two component transcriptional regulator, LuxR fa... 62 2e-08 UniRef50_Q2SC56 Response regulator containing a CheY-like receiv... 62 2e-08 UniRef50_B7KH54 Two component transcriptional regulator, LuxR fa... 62 2e-08 UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmic... 62 2e-08 UniRef50_UPI0001BC30E6 two-component system, NarL family, respon... 61 2e-08 UniRef50_C5SBA1 Two component transcriptional regulator, LuxR fa... 61 2e-08 UniRef50_B9XL75 Two component transcriptional regulator, LuxR fa... 61 2e-08 UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR fa... 61 2e-08 UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus... 61 2e-08 UniRef50_B4SJL0 Two component transcriptional regulator, LuxR fa... 61 2e-08 UniRef50_C4ZM15 Two component transcriptional regulator, LuxR fa... 61 2e-08 UniRef50_A9EDS1 Probable transcription regulator protein n=1 Tax... 61 2e-08 UniRef50_C6P057 Two component transcriptional regulator, LuxR fa... 61 2e-08 UniRef50_UPI00017468E1 two-component response regulator n=1 Tax=... 61 2e-08 UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa... 61 2e-08 UniRef50_Q2G8Z2 Two component transcriptional regulator, LuxR fa... 61 2e-08 UniRef50_A6SW03 DNA-binding response regulator, LuxR family n=1 ... 61 2e-08 UniRef50_B5JPJ0 Sigma-70, region 4 family n=3 Tax=Verrucomicrobi... 61 3e-08 UniRef50_A4FK96 Two-component system response regulator n=2 Tax=... 61 3e-08 UniRef50_A6W5Y9 Two component transcriptional regulator, LuxR fa... 60 3e-08 UniRef50_B6WQV4 Putative uncharacterized protein n=1 Tax=Desulfo... 60 3e-08 UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacill... 60 3e-08 UniRef50_Q4ZV39 Regulatory protein, LuxR:Response regulator rece... 60 3e-08 UniRef50_A4XT64 Two component transcriptional regulator, LuxR fa... 60 3e-08 UniRef50_A5PER3 Two component system response regulator n=1 Tax=... 60 3e-08 UniRef50_A3JWJ3 Two component transcriptional regulator, LuxR fa... 60 4e-08 UniRef50_C6PXX3 Two component transcriptional regulator, LuxR fa... 60 4e-08 UniRef50_C5EKG9 Putative uncharacterized protein n=1 Tax=Clostri... 60 4e-08 UniRef50_C6WXD7 Transcriptional regulator, LuxR family n=1 Tax=M... 60 4e-08 UniRef50_C6W2Z0 Two component transcriptional regulator, LuxR fa... 60 4e-08 UniRef50_Q6WZ94 Transcriptional regulator n=1 Tax=Streptomyces v... 60 4e-08 UniRef50_C1DE28 Transcriptional regulatory protein AcoK, LuxR fa... 60 4e-08 UniRef50_C8WSR5 Two component transcriptional regulator, LuxR fa... 60 4e-08 UniRef50_B6IT53 Nitrate/nitrite response regulator protein NarL ... 60 4e-08 UniRef50_D1CEU2 Transcriptional regulator, LuxR family n=1 Tax=T... 60 4e-08 UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=... 60 4e-08 UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=... 60 4e-08 UniRef50_B1ZY58 Two component transcriptional regulator, LuxR fa... 60 4e-08 UniRef50_Q1AST2 Two component transcriptional regulator, LuxR fa... 60 4e-08 UniRef50_B5JFN7 Response regulator receiver domain protein n=1 T... 60 4e-08 UniRef50_A6TKJ8 Two component transcriptional regulator, LuxR fa... 60 4e-08 UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphy... 60 4e-08 UniRef50_B2A7N5 Two component transcriptional regulator, LuxR fa... 60 4e-08 UniRef50_D2BJB7 DNA-binding response regulator, LuxR family n=1 ... 60 4e-08 UniRef50_A9I8N3 Transcriptional regulator, LuxR-family n=1 Tax=B... 60 4e-08 UniRef50_Q5WJ71 Two-component response regulator n=5 Tax=Bacilla... 60 4e-08 UniRef50_C6VTJ6 Two component transcriptional regulator, LuxR fa... 60 5e-08 UniRef50_B5FC84 Regulatory protein CsgD n=2 Tax=Vibrio fischeri ... 60 5e-08 UniRef50_Q160B5 Nitrate/nitrite response regulator protein, puta... 60 5e-08 UniRef50_B0UG66 Two component transcriptional regulator, LuxR fa... 60 5e-08 UniRef50_B4WJL3 Response regulator receiver domain protein n=1 T... 60 5e-08 UniRef50_A5V3K4 Regulatory protein, LuxR n=1 Tax=Sphingomonas wi... 60 5e-08 UniRef50_D2SFS4 Two component transcriptional regulator, LuxR fa... 60 5e-08 UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR fa... 60 5e-08 UniRef50_C1F7G9 Two-component response regulator n=1 Tax=Acidoba... 60 5e-08 UniRef50_C6BLL9 Two component transcriptional regulator, LuxR fa... 60 6e-08 UniRef50_B9ZR28 Transcriptional regulator, LuxR family n=1 Tax=T... 60 6e-08 UniRef50_B1IL87 Transcriptional regulator, LuxR family n=5 Tax=C... 60 6e-08 UniRef50_B0UJT9 Two component transcriptional regulator, LuxR fa... 60 6e-08 UniRef50_C5C4C2 Two component transcriptional regulator, LuxR fa... 59 7e-08 UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus... 59 7e-08 UniRef50_Q0VRG1 DNA-binding response regulator, LuxR family n=1 ... 59 7e-08 UniRef50_A8ZMB6 Two-component transcriptional regulator, LuxR fa... 59 7e-08 UniRef50_C6D0G6 Two component transcriptional regulator, LuxR fa... 59 7e-08 UniRef50_Q21QQ8 ATP-dependent transcriptional regulator, MalT-li... 59 7e-08 UniRef50_D2PVA7 Two component transcriptional regulator, LuxR fa... 59 7e-08 UniRef50_B3RA82 Response regulator protein; Response regulator r... 59 7e-08 UniRef50_Q21WT9 Two component transcriptional regulator, LuxR fa... 59 7e-08 UniRef50_Q1IP51 Two component transcriptional regulator, LuxR fa... 59 7e-08 UniRef50_A4XVC9 Regulatory protein, LuxR n=11 Tax=Bacteria RepID... 59 8e-08 UniRef50_C6WUU1 Transcriptional regulator, LuxR family n=1 Tax=M... 59 8e-08 UniRef50_A9B4P1 Two component transcriptional regulator, LuxR fa... 59 9e-08 UniRef50_Q1N2F1 Regulatory protein CsgD n=1 Tax=Bermanella maris... 59 9e-08 UniRef50_A4WGH9 Two component transcriptional regulator, LuxR fa... 59 9e-08 UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax... 59 9e-08 UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut... 59 9e-08 UniRef50_C6I025 Two component transcriptional regulator, LuxR fa... 59 1e-07 UniRef50_A4J6C2 Two component transcriptional regulator, LuxR fa... 59 1e-07 UniRef50_B8KRU1 Transcriptional regulator, LuxR family n=1 Tax=g... 59 1e-07 UniRef50_Q1AXM9 Transcriptional regulator, LuxR family n=1 Tax=R... 59 1e-07 UniRef50_Q0FEN9 DNA-binding response regulator, LuxR family prot... 59 1e-07 UniRef50_Q3ZWI9 DNA-binding response regulator, LuxR family n=3 ... 59 1e-07 UniRef50_A9AVS1 Two component transcriptional regulator, LuxR fa... 59 1e-07 UniRef50_A4SWC0 Two component transcriptional regulator, LuxR fa... 59 1e-07 UniRef50_Q7NJN3 Gsr1799 protein n=1 Tax=Gloeobacter violaceus Re... 59 1e-07 UniRef50_A6TNJ5 Two component transcriptional regulator, LuxR fa... 59 1e-07 UniRef50_D2LW99 Two component transcriptional regulator, LuxR fa... 59 1e-07 UniRef50_A3VS17 Putative two-component response regulator protei... 59 1e-07 UniRef50_C6QGA5 Transcriptional regulator, LuxR family n=1 Tax=H... 59 1e-07 UniRef50_A9DNR9 Regulatory protein n=2 Tax=Flavobacteriales RepI... 59 1e-07 UniRef50_A1AXR1 Two component transcriptional regulator, LuxR fa... 59 1e-07 UniRef50_UPI0001C312E2 transcriptional regulator, LuxR family n=... 59 1e-07 UniRef50_Q7UVB4 Nitrate/nitrite regulatory protein narP n=1 Tax=... 59 1e-07 UniRef50_B9JN67 Transcriptional regulator protein n=2 Tax=Agroba... 59 1e-07 UniRef50_C7LUR5 Transcriptional regulator, LuxR family n=1 Tax=D... 59 1e-07 UniRef50_B5IMZ0 DNA-binding response regulator n=1 Tax=Cyanobium... 59 1e-07 UniRef50_Q28MQ9 Transcriptional regulator, LuxR family n=1 Tax=J... 59 1e-07 UniRef50_D1BJZ8 Response regulator containing a CheY-like receiv... 59 1e-07 UniRef50_B5JP13 Sigma-70, region 4 family n=1 Tax=Verrucomicrobi... 59 1e-07 UniRef50_B9PAD6 Predicted protein n=33 Tax=cellular organisms Re... 58 1e-07 UniRef50_Q08VW7 Response regulator n=2 Tax=Cystobacterineae RepI... 58 1e-07 UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax... 58 1e-07 UniRef50_D1TNL2 Response regulator receiver protein n=1 Tax=Burk... 58 2e-07 UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenel... 58 2e-07 >UniRef50_P37640 Putative HTH-type transcriptional regulator yhjB n=98 Tax=Bacteria RepID=YHJB_ECOLI Length = 200 Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust. Identities = 200/200 (100%), Positives = 200/200 (100%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF Sbjct: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG Sbjct: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL Sbjct: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 Query: 181 YRRLEVKNRTQAAMMLNISS 200 YRRLEVKNRTQAAMMLNISS Sbjct: 181 YRRLEVKNRTQAAMMLNISS 200 >UniRef50_UPI0001C342BD hypothetical protein EcanA3_16147 n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001C342BD Length = 183 Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 86/178 (48%), Positives = 128/178 (71%), Gaps = 4/178 (2%) Query: 19 SLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCYWLLQKTVVQFPEVKVL 78 SLQQ IP ++I G QADE W L + P A+VM+DG+ + LL++ V +FP +V+ Sbjct: 3 SLQQLIPELNITGTRQADEFWTLLSASPSAIVMIDGNIIQDNGMALLEEIVYRFPGARVV 62 Query: 79 ITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGDW-RTTPEKDIK 137 + + + RW+++++ NV+AIVPR++ E F+ A++S GM +PG+W + P+++ Sbjct: 63 MVLSRKDPRWVEQLMKRNVMAIVPRNARPEIFSAALDSVCAGMACMPGEWLQPQPQQE-- 120 Query: 138 DLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMM 195 L +LS RQ ++L +LAAGESNKEIGR+LNIS TVKAHLE+++RRL+VKNRTQAAM+ Sbjct: 121 -LSALSDRQHDVLKLLAAGESNKEIGRSLNISAATVKAHLETVFRRLDVKNRTQAAMI 177 >UniRef50_C9XUR7 Putative HTH-type transcriptional regulator yhjB n=1 Tax=Cronobacter turicensis RepID=C9XUR7_CROTZ Length = 218 Score = 162 bits (410), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 87/195 (44%), Positives = 117/195 (60%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 M ++M D+QSIFI GM L+Q IP ++I G + DE+ L +P +L++LDGD Sbjct: 19 MNVLMVDKQSIFIEGMASVLKQFIPEITICGLNNPDEINTTLGYFPASLILLDGDAGKSV 78 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 LL + P + V++ C L+ + +V A V RDS E + +AAMG Sbjct: 79 NIDLLDDLAQRHPALPVVLLVNQCQPALLRLFLRHHVAAFVRRDSPPEAIVQTLRAAAMG 138 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 M+ P + + + L LS RQREIL +LAAGESNK+I R LNIS GTVKAHLES+ Sbjct: 139 MLCFPQESISLLDSGPGTLARLSERQREILKLLAAGESNKQISRHLNISAGTVKAHLESI 198 Query: 181 YRRLEVKNRTQAAMM 195 +RRL V NRTQAAM+ Sbjct: 199 FRRLNVTNRTQAAML 213 >UniRef50_C6DKK0 Two component transcriptional regulator, LuxR family n=5 Tax=Pectobacterium RepID=C6DKK0_PECCP Length = 204 Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 74/203 (36%), Positives = 123/203 (60%), Gaps = 12/203 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGD-QDGE 59 M +V+ D+ +FI G+ + L I V+I G + D++W LE A ++L+ + ++GE Sbjct: 1 MNVVIIDKSPVFIQGLSVGLNDFIHDVNIVGVKEIDDVWSCLEGMKNAFILLNCNKENGE 60 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 + ++L + ++ V V+I + L + +V+ +V + S V++ A A+ + +M Sbjct: 61 YSFFL-ETLHEKYIGVSVIIMVDAIERHILNNYLKHHVMGVVLKTSPVDSIAQALKTVSM 119 Query: 120 GMMFLPGD------WRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 GM+ LP D W + + +K LS RQ E+L ++A+G SNK+I R LNIS GTV Sbjct: 120 GMVCLPDDGVIYEGW--SVDNSVKG--KLSERQHEVLQLIASGASNKQISRTLNISAGTV 175 Query: 174 KAHLESLYRRLEVKNRTQAAMML 196 K+HLES++RRL V+NRTQAA++L Sbjct: 176 KSHLESIFRRLNVRNRTQAAIVL 198 >UniRef50_Q988F5 Two component system response regulator n=1 Tax=Mesorhizobium loti RepID=Q988F5_RHILO Length = 225 Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 19/214 (8%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEA-LVMLDGDQDGEF 60 +IV+ D ++ G++++L IP V I A+ D + LE L +LD + G F Sbjct: 3 RIVIADDHGLYRRGLRLALMAGIPSVEIFEAACFDAVVNLLEEQASIDLAILDLNMPGLF 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +L + +P+ + I + D ++ + + + + + E LAVN G Sbjct: 63 NQEVLSDVLAAYPDTRFAIVSGDDSRSEILTALSIGLHGYIVKSQKDEEVVLAVNEILAG 122 Query: 121 MMFLPG-------DWRT-----TPEKDIK------DLKSLSARQREILTMLAAGESNKEI 162 +++P D R+ + I+ DL L++RQR++L ++A G SNKEI Sbjct: 123 RIYVPALLSRTSADQRSYAALPSARNPIRQRVGSSDLGRLTSRQRDVLKLMAEGYSNKEI 182 Query: 163 GRALNISTGTVKAHLESLYRRLEVKNRTQAAMML 196 R L+I+ T K H ++ R L V+NRT+AA++L Sbjct: 183 ARNLDIAEATTKIHAAAILRELGVRNRTEAAVLL 216 >UniRef50_A1S7C5 Response regulator receiver protein n=5 Tax=Proteobacteria RepID=A1S7C5_SHEAM Length = 238 Score = 89.4 bits (220), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 10/205 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEA---LVMLDGDQD 57 + +++ D +F + ++ +L A AD L Q L+ PE LV+LD Sbjct: 21 LNVIIADDHPLFRNALRQALSSAFADTRWFEADSADALQQLLDK-PEVDYDLVLLDLQMP 79 Query: 58 GEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSA 117 G Y L +P++ V++ + + + + IH+ +P+ +++ET A+++ Sbjct: 80 GSHGYSTLIHLRSHYPDIPVVVISAHEDAQTISRAIHYGSAGFIPKSASMETLTEAMSAV 139 Query: 118 AMGMMFLPGDWRTTP-EKDIKD-----LKSLSARQREILTMLAAGESNKEIGRALNISTG 171 G ++LP D E+D D L L+ +Q +L M A G NK+I L +S Sbjct: 140 LYGDIWLPQDIELVKIEEDGTDQVAGKLADLTPQQYRVLQMFAEGLLNKQIAYDLGVSEA 199 Query: 172 TVKAHLESLYRRLEVKNRTQAAMML 196 T+KAH +++R+L V+NRTQA + L Sbjct: 200 TIKAHATAIFRKLGVRNRTQAVIAL 224 >UniRef50_C6BJ98 Two component transcriptional regulator, LuxR family n=2 Tax=Ralstonia pickettii RepID=C6BJ98_RALP1 Length = 219 Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 64/206 (31%), Positives = 104/206 (50%), Gaps = 10/206 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQ-RIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGE 59 M I++ D +F G+ L GV I A ++ P A+VM +D + Sbjct: 1 MNILVIDSLPLFAAGVSNVLNALDAQGVFIDTHYTAQIGPACRQAEPTAVVMEWSAEDDD 60 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 L + V PEV VL+T + + + + F +V R +T + A+ Sbjct: 61 ARQRLSELKAV-LPEVPVLLTVQAVGRHVVGDALRFGAAGVVDRQATADVLLEALQRITS 119 Query: 120 GMMFLP-------GDWRTTPEKDIKDL-KSLSARQREILTMLAAGESNKEIGRALNISTG 171 G ++LP D R TP + ++ + L+ RQ E+L +LA G+SNK+I R LN++ G Sbjct: 120 GAVYLPPISNLYPDDPRHTPGESPAEIWRRLTPRQHEVLQLLAEGKSNKQICRVLNVAEG 179 Query: 172 TVKAHLESLYRRLEVKNRTQAAMMLN 197 T+K HL +L+R++ V NRT+AA+ L+ Sbjct: 180 TIKNHLYALFRQIGVNNRTEAALWLS 205 >UniRef50_Q2SQ58 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQ58_HAHCH Length = 207 Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 11/198 (5%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEA-LVMLDGDQDGEF 60 + V+ D IF G+K+ + P I A+ E+++ L + + LV+LD Sbjct: 4 RFVITDDHGIFRSGLKLIISGLYPDAEILEAASGSEVFRLLNANTDVDLVLLDLSMPDSQ 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 LL+K +F + + +Q I L VP+ S+ A A+ G Sbjct: 64 GLELLRKLKQEFVMTPFAVISASEEAALIQGAIQLGALGYVPKSSSNAVIASAIQLMLSG 123 Query: 121 MMFLPGDWRTT------PEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVK 174 +++P + T P DI L+ RQ E+L +LA G SNK+IG L+I+ GT+K Sbjct: 124 GVYIPHELLRTGHDEGMPTGDI----CLTPRQHEVLGLLAEGMSNKQIGTKLSIAPGTIK 179 Query: 175 AHLESLYRRLEVKNRTQA 192 AH+ +++R L NRTQA Sbjct: 180 AHIAAIFRELNAANRTQA 197 >UniRef50_B2SU06 Two-component system regulatory protein n=73 Tax=Proteobacteria RepID=B2SU06_XANOP Length = 222 Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 51/200 (25%), Positives = 102/200 (51%), Gaps = 7/200 (3%) Query: 3 IVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEA-LVMLDGDQDGEFC 61 +++ D +F ++ ++Q+ +PGV + A D L+ ++ P+A L+++D + G Sbjct: 4 LLIADDHPLFREALRGAVQRVMPGVQLLEADNVDALYTLADAQPDADLLLMDLNMPGAQG 63 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 + L P++ V++ + ++ I +P+ + +T A+ + G Sbjct: 64 FSALVHMRSLHPQLPVVVVSAREEPTVMRRAIDHGAFGFIPKSADSDTIGRALATVLDGE 123 Query: 122 MFLPGDWRTTPEKDIKD------LKSLSARQREILTMLAAGESNKEIGRALNISTGTVKA 175 ++P + + P D ++ L+ L+ +Q +L ML AG NK+I L +S T+KA Sbjct: 124 RWIPAEAQNLPPTDSEEREVGQRLRDLTPQQFRVLQMLGAGRLNKQIAYDLGVSEATIKA 183 Query: 176 HLESLYRRLEVKNRTQAAMM 195 H+ ++ R+L V NRTQA +M Sbjct: 184 HVTAILRKLGVTNRTQAVLM 203 >UniRef50_B1YYJ9 Transcriptional regulator, LuxR family n=4 Tax=Burkholderia ambifaria RepID=B1YYJ9_BURA4 Length = 227 Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 60/209 (28%), Positives = 109/209 (52%), Gaps = 16/209 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESY-PEAL--VMLDGDQD 57 M ++M D +F+ G+ L +R + A +++ + ++ PE + + ++ D+ Sbjct: 1 MNVLMIDSPPLFVAGVADVLCKRDVNWHVWSARCPEDVLRLRDALLPETVEAITIECDEH 60 Query: 58 GEFCYW--LLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVN 115 W +L +T P L AT +R + + + I+ R ++ + FA A+ Sbjct: 61 AARPSWPNVLHETFAGAPW---LCVATAVCRRTIADALLAGAAGIIDRHASADEFADALG 117 Query: 116 SAAMGMMFLP-GDWRTT-------PEKDIKDLKSLSARQREILTMLAAGESNKEIGRALN 167 A G +++P D T P D + + L+ RQR++L +LA G+SNK+I R LN Sbjct: 118 RVAAGAIYVPPNDGGATQARPGGLPAGDDRAFERLTPRQRDVLRLLAEGKSNKQICRVLN 177 Query: 168 ISTGTVKAHLESLYRRLEVKNRTQAAMML 196 ++ GT+K HL +L+R++ V NRT+AA+ L Sbjct: 178 VAEGTIKNHLYALFRQIGVSNRTEAALWL 206 >UniRef50_B6IU89 Glycerol metabolism activator AgmR n=1 Tax=Rhodospirillum centenum SW RepID=B6IU89_RHOCS Length = 205 Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 2/196 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPE-ALVMLDGDQDGE 59 M++++ D + ++ +++ PG + G D L + LV+LD G Sbjct: 1 MRLLIADDHDLLRDALRSHIERASPGTEVLGVGSVDAAVTALARHRGIELVLLDLRMPGM 60 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 L + P VKV + + + + ++ + F + +P+ A++ Sbjct: 61 NGLEGLVRLRTSHPGVKVALMSGEASPEDVRAALAFGAVGFLPKTLPGTALVEAISRLVA 120 Query: 120 GMMFLP-GDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLE 178 G F+P G P+ + S + R+RE+L L G SNKEI RAL++ TVK H+ Sbjct: 121 GQTFVPEGAAAPEPDSQLAGGASFTRREREVLDFLLKGCSNKEIARALSLEEVTVKLHVR 180 Query: 179 SLYRRLEVKNRTQAAM 194 L R+L KNRTQAAM Sbjct: 181 GLCRKLGAKNRTQAAM 196 >UniRef50_Q1YMP2 Two component response regulator n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YMP2_MOBAS Length = 250 Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 24/207 (11%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLD----GDQ 56 M++V+ D ++F G++ LQ+ V + A+ ADELWQ L + L+++D G + Sbjct: 1 MKLVVADGHALFRAGLRYLLQELADVVEVHEAATADELWQLLSAGSYDLILVDHLLGGLE 60 Query: 57 DGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS 116 G + ++T V + + ++ + +P+DS+ A+N Sbjct: 61 HGSEIGNIRRRT----GGAPVAVVSGKDEPAMIRAALDDGAAGFIPKDSSPRLMIQALNL 116 Query: 117 AAMGMMFLP-----------GDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRA 165 G +LP R P++ SL+ARQ E+ LA G SNK+I R+ Sbjct: 117 ILAGGFYLPPTILSLLPRVRAGERPDPQR-----VSLTARQAEVWNHLAKGASNKQIARS 171 Query: 166 LNISTGTVKAHLESLYRRLEVKNRTQA 192 L +S G VKAH+ L R L +NRT+A Sbjct: 172 LGLSEGAVKAHVAGLLRLLGARNRTEA 198 >UniRef50_B0RP06 Transcriptional regulator, LuxR family n=22 Tax=cellular organisms RepID=B0RP06_XANCB Length = 281 Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 54/201 (26%), Positives = 98/201 (48%), Gaps = 4/201 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEA-LVMLDGDQDGE 59 + I++ D +F + L Q +P + AS A L L S+P+A LV+LD G Sbjct: 73 LTILVADDHPLFRAAVIHVLHQTLPTAEVVEASSATTLSAMLRSHPQAELVLLDLAMPGA 132 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 + L + P++ V++ +++ + R ++ F +P+ + E+ AV S Sbjct: 133 RGFSALLHVRGEHPDIPVVVISSNDHPRVIRRAQQFGAAGFIPKSTPAESIGTAVASVLD 192 Query: 120 GMMFLPGDWRTTPEKDIK---DLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAH 176 G + P E D + L L+ +Q +L LA G NK+I L ++ TVK H Sbjct: 193 GGTWFPPMTAERSEADAQLAAKLAQLTPQQFRVLLCLADGLLNKQIAHELGLAENTVKVH 252 Query: 177 LESLYRRLEVKNRTQAAMMLN 197 + ++ ++L+ +RTQAA+++ Sbjct: 253 VTAILKKLDCYSRTQAAVLVK 273 >UniRef50_B8CLF7 Regulatory protein, LuxR:Response regulator receiver n=76 Tax=Proteobacteria RepID=B8CLF7_SHEPW Length = 219 Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 8/204 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLES--YPEALVMLDGDQDG 58 + I++ D +F + ++ +L A AD L L++ +V+LD G Sbjct: 6 LNIIIADDHPLFRNALRQALATAFTNTQWFEADSADALQNLLDNSDIEYDVVLLDLQMPG 65 Query: 59 EFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAA 118 Y L + E+ V++ + + + IH+ +P+ S++ET A A+ + Sbjct: 66 SHGYSTLIHLRTHYQELPVVVISAHEDNTTISRAIHYGSSGFIPKSSSMETLATALEAVL 125 Query: 119 MGMMFLPGDWRTTPEKD------IKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 G ++LP D L L+ +Q ++L M A G NK+I L +S T Sbjct: 126 FGDVWLPEGVELQEVSDDGTDQMASKLSDLTPQQYKVLQMFAEGLLNKQIAYDLGVSEAT 185 Query: 173 VKAHLESLYRRLEVKNRTQAAMML 196 +KAH +++R+L V+NRTQA + L Sbjct: 186 IKAHATAIFRKLGVRNRTQAVIAL 209 >UniRef50_A6FJH9 DNA-binding response regulator, LuxR family n=1 Tax=Moritella sp. PE36 RepID=A6FJH9_9GAMM Length = 222 Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 42/132 (31%), Positives = 75/132 (56%), Gaps = 6/132 (4%) Query: 71 QFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGDWRT 130 Q P+V V++ + ++ + + + VP+ +V A++S G +++PG + Sbjct: 79 QNPDVPVVVISAYSDETIIAKAMQHGASGFVPKSESVAVIISAISSVLAGQLWVPGTFEK 138 Query: 131 TPEKDIKD-----LKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLE 185 P++D+ + L+A++ IL M + G NK+IG L ++ TVKAH +++R+L Sbjct: 139 -PKQDVNATADVAIAKLTAQEYRILMMFSEGLLNKQIGDKLCVAEATVKAHASAIFRKLN 197 Query: 186 VKNRTQAAMMLN 197 V+NRTQAAMML Sbjct: 198 VRNRTQAAMMLG 209 >UniRef50_Q07YA8 Two component transcriptional regulator, LuxR family n=6 Tax=Alteromonadales RepID=Q07YA8_SHEFN Length = 227 Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 54/208 (25%), Positives = 101/208 (48%), Gaps = 15/208 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPE-ALVMLD---GDQ 56 +++ + D +F + ++Q+ + + A EL +E +P+ L+ +D Sbjct: 5 IKVAIADDHPLFRAALTQAVQKSVNNAQVLEAENFQELIAIVEQHPDIELIFIDLHMPGN 64 Query: 57 DGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS 116 DG LLQ FP++ V++ ++D +++ I+F A +P+ + + + A++ Sbjct: 65 DGFTGLTLLQN---HFPDIVVIMVSSDDQPEIIRKAINFGASAFIPKSANLTQISTAIDI 121 Query: 117 AAMGMMFLP------GDWRTTPEKD--IKDLKSLSARQREILTMLAAGESNKEIGRALNI 168 G ++LP D T E K L L+ +Q +L +A G NK+I LNI Sbjct: 122 VLEGGIWLPEHTNISADQHTAAEHQRLAKQLAQLTPQQYTVLANIANGRLNKQIAYDLNI 181 Query: 169 STGTVKAHLESLYRRLEVKNRTQAAMML 196 TVK H+ ++ +LE+ NRTQA ++ Sbjct: 182 KETTVKKHVSAILLKLEINNRTQAGLVF 209 >UniRef50_C5SGD8 Two component transcriptional regulator, LuxR family n=2 Tax=Caulobacteraceae RepID=C5SGD8_9CAUL Length = 218 Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 21/209 (10%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQG----ASQADELWQKLESYPEALVM---LD 53 ++I++ D ++ G+K L G S+ G A L + L P+ ++M L Sbjct: 6 LRILIVDDHALAREGLKAVLTSS--GFSVVGEAADGPAAIALTEAL--CPDVVLMDVRLK 61 Query: 54 GDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALA 113 GD DG ++ +VL+ +++E + V +D+ ++ A Sbjct: 62 GDMDG---LEATRRIAALGLAARVLMLTLHDLPAYVREALAAGAAGYVLKDTAIDDLQAA 118 Query: 114 VNSAAMGMMFLPGDWRTTP-------EKDIKDLKSLSARQREILTMLAAGESNKEIGRAL 166 + A G LP D + E+D L SL+ R+REI+ ++A G +NKEIGR+L Sbjct: 119 IVRVAQGQTALPLDLVSAAMRAPEPVERDPTALSSLTGREREIVHLIAEGMTNKEIGRSL 178 Query: 167 NISTGTVKAHLESLYRRLEVKNRTQAAMM 195 IS TVKAH+E L +L V +RTQAA++ Sbjct: 179 GISPATVKAHVERLIAKLGVTDRTQAAVL 207 >UniRef50_B8EIF2 Two component transcriptional regulator, LuxR family n=1 Tax=Methylocella silvestris BL2 RepID=B8EIF2_METSB Length = 209 Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 41/116 (35%), Positives = 70/116 (60%), Gaps = 1/116 (0%) Query: 77 VLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGDWRTTPEKDI 136 V+I+A D + + + I+ +P+ S++E A A+ G +++PG ++ Sbjct: 81 VIISAID-DTTIVNQAINCGAAGFIPKSSSMEDLAAALKQVLDGGVYIPGSDEAREKRGP 139 Query: 137 KDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQA 192 + +L+ RQ +L +L+AG+SNKEI RAL+IS TVK H+ +++R+L V RTQA Sbjct: 140 AEADALTPRQLAVLGLLSAGKSNKEIARALSISDLTVKVHITTIFRKLGVATRTQA 195 >UniRef50_C5CKC0 Two component transcriptional regulator, LuxR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CKC0_VARPS Length = 227 Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 24/215 (11%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 M+I++ D + I +K L + PG+ A DEL + L ++D + G Sbjct: 1 MKILIADDHRLVIEAVKAKLSELGPGIEFVLAMSVDELLAGATDELD-LALIDLNMPGAD 59 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + + P V V++ + + ++ + VL +P+ + E AV G Sbjct: 60 GQAHIDEIRRRHPAVPVIVLSGYEDPAIMRSALERGVLGFIPKAYSPEVMLSAVRLVLAG 119 Query: 121 MMFLP--------------------GDWRTT--PEKDIKDLKS-LSARQREILTMLAAGE 157 +++P GD R+ + ++ L+S L+ RQ E+L +L+ G+ Sbjct: 120 GVYVPPMMLTALPPGIVAGVAPTQNGDARSAGASSQTLEHLRSVLTERQVEVLQLLSQGK 179 Query: 158 SNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQA 192 NK IGR+L IS GTVK HL +++R L V+NRT+A Sbjct: 180 PNKLIGRSLGISEGTVKIHLAAIFRALNVRNRTEA 214 >UniRef50_A4TWP7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TWP7_9PROT Length = 213 Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 99/209 (47%), Gaps = 15/209 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEA-LVMLDGDQDGE 59 M+I++ D + G++ +++ PG IQ A E ++E+ P L++LD G Sbjct: 1 MRIILADDHVMLREGLRPFVERIAPGTIIQEAGSFTEALAQIEADPSVDLLILDIKMPGM 60 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 + L +FP ++ +I ++ ++ + E + +P+ + A+ Sbjct: 61 NGFQGLSTIKTRFPAIRCVILSSMADRDHVLEAMRLGADGFIPKHLSGGAMVSALQLVLS 120 Query: 120 GMMFLP------------GDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALN 167 G F+P G +P D+ L L+ R+R+IL +L G NK I L+ Sbjct: 121 GERFIPSMLMDSANNQISGASDRSPSGDL--LGRLTPRERDILHLLREGLPNKVIAARLD 178 Query: 168 ISTGTVKAHLESLYRRLEVKNRTQAAMML 196 + TVK+HL +++R+L V+NR QA ML Sbjct: 179 VREVTVKSHLGNMFRKLGVQNRLQAMRML 207 >UniRef50_B1XWH3 Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XWH3_LEPCP Length = 219 Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 16/206 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPE-ALVMLD-GDQDG 58 M+ ++ D S+F G+ + + QR P V + ++ L + P L++LD G D Sbjct: 1 MKALLVDDHSLFREGLTMLMAQRFPAVELFDVGDLNDAEAVLGTEPGIELILLDLGLPDS 60 Query: 59 EFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAA 118 + L Q+ PEV +++ + D + I +P+ + + A+ Sbjct: 61 QGLDSL-QRLRSVVPEVPIVVMSADERPETILAAIDQGAAGFIPKTARIGAIESALRVVL 119 Query: 119 MGMMFLP-GDWRTT-------PEKD-----IKDLKSLSARQREILTMLAAGESNKEIGRA 165 G +FLP G +R+ PE D + L+ RQ ++L ++A G+SNK+I RA Sbjct: 120 DGGIFLPQGIYRSIAPPLADGPEVDEAQAALMQSLGLTPRQLDVLRLMALGQSNKQISRA 179 Query: 166 LNISTGTVKAHLESLYRRLEVKNRTQ 191 L+++ T+K H+ ++RRL+V +R+Q Sbjct: 180 LSVAESTIKTHVAVVFRRLDVTSRSQ 205 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 7/198 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQG-ASQADELWQKLESYPEALVMLDGDQDGE 59 +++++ D I G+K L + P +S+ A DE + ++ +V+LD + G Sbjct: 5 IRVLVADDHPIVRQGLKTFLDIQ-PDLSVVAEARDGDEALALIAAHEPDVVLLDLNMPGS 63 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 +L + KV++ + + E + + +D ++ A A+ S A Sbjct: 64 DGAKVLTRLAASDHRAKVIVLTSVTEAVRVTEAVAAGAAGFLYKDIDPDSLAQAIRSVAD 123 Query: 120 GMMFLPGDW---RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAH 176 G + + T P + +L+AR+RE+L ++AAG SN+EI + L+++ TVK H Sbjct: 124 GQVIFAREAVTAMTAPAP--GPVAALTAREREVLALVAAGRSNREIAKQLSVAEKTVKTH 181 Query: 177 LESLYRRLEVKNRTQAAM 194 L SL+R+L V +RTQAA+ Sbjct: 182 LSSLFRKLGVADRTQAAL 199 >UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5X6_PELCD Length = 223 Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 107/209 (51%), Gaps = 16/209 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQG-ASQADELWQKLESYPEALVMLDGDQDGE 59 ++ + D + G+++SL R + G AS + +K++ P + ++D D G Sbjct: 7 FKVFLADDHPLLRTGLRMSLS-RFADIDFIGEASDGFKAVEKIKQNPPDVALIDVDMPGL 65 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 ++ Q+P++ +LI ++ +K +++E + V + + A + + + Sbjct: 66 SGIAAVRMLRKQYPDMTLLILSSYSDKHFIEEAMQAGADGYVLKSIDINELADLIRAFSC 125 Query: 120 G-------MMFLPGDWRTT-------PEKDIKDLKSLSARQREILTMLAAGESNKEIGRA 165 G +M L DW + +KD + L+ R+++IL+ LA G+ NKEI A Sbjct: 126 GEHPMSPYLMDLAVDWHASEQEEESPADKDDESDAFLTRREQQILSCLAQGQGNKEISNA 185 Query: 166 LNISTGTVKAHLESLYRRLEVKNRTQAAM 194 L IST TVK H+++++++LEVK+R +A + Sbjct: 186 LFISTETVKTHIKNIFKKLEVKSRLEAVI 214 >UniRef50_Q48AG6 DNA-binding response regulator, LuxR family n=4 Tax=Alteromonadales RepID=Q48AG6_COLP3 Length = 219 Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 72/131 (54%), Gaps = 5/131 (3%) Query: 71 QFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGDW-- 128 FP++ V+I + + + + + + VP+ + V+ A+ + G +LP + Sbjct: 76 HFPQIPVVIVSAHEDHDTISKAMSYGAAGFVPKSTPVDDIYSAIVAVLSGDTWLPASFEQ 135 Query: 129 --RTTPEKDIKD-LKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLE 185 R + DI + + SL+ +Q IL M A G NK+I LN+S T+KAH +++R+L+ Sbjct: 136 KQRDNSDGDIAERVASLTQQQYRILMMFAQGMLNKQIAYDLNVSEATIKAHATAIFRKLD 195 Query: 186 VKNRTQAAMML 196 V+NRTQA + + Sbjct: 196 VRNRTQAVIAI 206 >UniRef50_Q8EC39 DNA-binding response regulator, LuxR family n=1 Tax=Shewanella oneidensis RepID=Q8EC39_SHEON Length = 206 Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 9/203 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEA--LVMLDGDQDG 58 +++ D +++ + L +PG + A+ EL+ L E L+++D G Sbjct: 5 FHVMIADDHPLYLDALVNGLVSHLPGTQVSQANNYIELFDSLYLQVEEIDLLIMDLFMPG 64 Query: 59 EFCYWLLQKTVVQFPEVK-VLITATD---CNKRWLQEVIHFNVLAIVPRDSTVETFALAV 114 Y L QFP + V+I+A D + +Q F + P + + + Sbjct: 65 SSGYAGLSFLRTQFPTLPIVVISALDDLIARSQCIQHGAAFISKSTAPTNIFKQVEQILD 124 Query: 115 NSAAMGMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVK 174 S + + T + K +K+L+ Q +L ++AAG SNK I +LNIS TVK Sbjct: 125 GSYQFPLTQIKSSIETI---NAKKIKTLTPSQFRVLHLIAAGHSNKTIADSLNISEKTVK 181 Query: 175 AHLESLYRRLEVKNRTQAAMMLN 197 AH+ +++ +L+VKNRTQAA++L+ Sbjct: 182 AHISAIFEKLDVKNRTQAALLLS 204 >UniRef50_UPI0000384741 COG2197: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000384741 Length = 190 Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 45/155 (29%), Positives = 83/155 (53%), Gaps = 5/155 (3%) Query: 46 PEALVMLDGDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDS 105 P L++LD + G + L + P+ +++ + + +++ + +P+ S Sbjct: 29 PLDLILLDLNMPGMDGFTGLLRLREDLPDTPIIVVSASEEEDVIEQALACGAAGFIPKSS 88 Query: 106 TVETFALAVNSAAMGMMFLPGDWRTTPEKDI-----KDLKSLSARQREILTMLAAGESNK 160 + E AV G +F P + T K I + L SL+ RQR +L++LA G+SNK Sbjct: 89 SKERMCEAVGLVMSGEIFRPEEIFGTKAKVIDPLLEEKLGSLTHRQRMVLSLLARGKSNK 148 Query: 161 EIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMM 195 +I L+++ TVKAH+ ++ R+L+V +RTQA ++ Sbjct: 149 QIAYELDVTNTTVKAHMTAILRKLKVTSRTQAVIV 183 >UniRef50_C5V3Z0 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3Z0_9PROT Length = 215 Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 53/204 (25%), Positives = 100/204 (49%), Gaps = 16/204 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEA-LVMLD----GD 55 M+I+M D ++F GM+ LQQ + + + E + + +PE LV+LD G Sbjct: 1 MKILMADDHALFRDGMRYVLQQLSDTLELLEVNNFPECLKVVAQHPELDLVLLDLNMPGS 60 Query: 56 QDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVN 115 + + Q+ FP + V++ + D +++V+ + + + ST A+ Sbjct: 61 EGARSVSYFHQR----FPRIPVVVVSGDDALANMEKVMDYGASGFICKSSTSHAMLAALK 116 Query: 116 SAAMGMMFLPGD---WRTTPEKDIKDLKS----LSARQREILTMLAAGESNKEIGRALNI 168 G +++P + R+ D + + + L+ RQ E+L + AG SNKEI ++ Sbjct: 117 RVLSGEIYVPPEIFRQRSVQAVDKRSMHTNGYGLTPRQMEVLEHICAGMSNKEIASHTHL 176 Query: 169 STGTVKAHLESLYRRLEVKNRTQA 192 + GTVK H+ ++Y+ L+V R +A Sbjct: 177 AEGTVKIHVAAVYQTLKVNGRLEA 200 >UniRef50_Q1QZ85 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=Q1QZ85_CHRSD Length = 220 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 8/201 (3%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEA-LVMLDGDQDGEF 60 + ++ D +F + +L+Q P I A + + +P+A L++LD G Sbjct: 6 KFIVADDHPLFRAALNQALRQVAPQAEIVEADTMEATTDMVLRHPDADLILLDLHMPGAH 65 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + L + Q PEV V++ + ++ I + +P+ S+++ A A+ G Sbjct: 66 GFSGLIQLRGQSPEVPVVVISGSEEPPVVRRAIDYGASGFIPKSSSLDVIAEAIRQVLEG 125 Query: 121 MMFLP-------GDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 ++LP G+ + + + SL+ +Q +L ML G NK+I LN+S T+ Sbjct: 126 EVWLPEEMVDILGESNEEEARFAEAIASLTPQQFRVLNMLNEGLLNKQIAYELNVSEATI 185 Query: 174 KAHLESLYRRLEVKNRTQAAM 194 KAH+ ++ R+L V +RTQA + Sbjct: 186 KAHVTAILRKLGVHSRTQAVI 206 >UniRef50_B5IX99 Response regulator receiver domain protein n=2 Tax=Rhodobacteraceae RepID=B5IX99_9RHOB Length = 220 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/165 (30%), Positives = 84/165 (50%), Gaps = 7/165 (4%) Query: 36 DELWQKLE-SYPEALVMLDGDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIH 94 DE +++E P LV+LD + G L+ + +V + + + K+ + + Sbjct: 35 DEAAERIEKDDPYDLVLLDYNMPGMNGLDGLKAAIALGGGQRVALISGEATKQIAEVALE 94 Query: 95 FNVLAIVPRDSTVETFALAVNSAAMGMMFLPGDWRT----TPEKDIKDLKSLSARQREIL 150 VP+ ++ A+ AMG + P D+ T TP + D L+ R+ ++L Sbjct: 95 AGAAGFVPKSLPAKSLVNAIKFMAMGEQYAPIDFMTAVEQTPTNPLAD--KLTERELQML 152 Query: 151 TMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMM 195 L G+SNKEI R L I TVK H+++LYR++ V NRTQAA++ Sbjct: 153 KGLTEGKSNKEIARDLEIREPTVKLHMKTLYRKVGVANRTQAALI 197 >UniRef50_Q5QVF9 Response regulator, LuxR family (CheY, HTH domains) n=3 Tax=Alteromonadales RepID=Q5QVF9_IDILO Length = 216 Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/202 (26%), Positives = 100/202 (49%), Gaps = 10/202 (4%) Query: 4 VMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPE-ALVMLDGDQDGEFCY 62 ++ D +F MK +L + + I+ AS +L Q+L+ +P+ LV LD G Sbjct: 5 IIADDHPLFRAAMKQALSESLESDIIE-ASSFSQLEQQLQQFPQIELVFLDLSMPGNRGL 63 Query: 63 WLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMM 122 L QFP++ V+I + + + R +++ + +P+ + + AV + G Sbjct: 64 TGLSVLRSQFPDILVVIVSANEDTRVIRQAMALGASGYIPKSVPLPEWQTAVTTVLSGDN 123 Query: 123 FLPGDWRTT----PEKDIKD----LKSLSARQREILTMLAAGESNKEIGRALNISTGTVK 174 +LP RT P+ ++ D L+ L+ +Q ++L +A G NK+I L + T+K Sbjct: 124 WLPESMRTVSLTEPDVEMSDFANKLEQLTPQQFKVLQCIADGLLNKQIAYELGVQETTIK 183 Query: 175 AHLESLYRRLEVKNRTQAAMML 196 H ++ R+L+ NRTQA ++ Sbjct: 184 QHASAILRKLKCVNRTQAGILF 205 >UniRef50_Q1GI23 Two component transcriptional regulator, LuxR family n=35 Tax=Rhodobacterales RepID=Q1GI23_SILST Length = 214 Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/174 (30%), Positives = 86/174 (49%), Gaps = 7/174 (4%) Query: 26 GVSIQGASQADELWQKLE-SYPEALVMLDGDQDGEFCYWLLQKTVVQFPEVKVLITATDC 84 G I + ++LE + P LV+LD + G LQ+ + V I + Sbjct: 35 GAQITATTDLPRAMKELEDNGPFDLVLLDYNMPGMNGLDGLQRALKANGGRGVAILSGSA 94 Query: 85 NKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGDW----RTTPEKDIKDLK 140 R Q+ + + +P+ ++ AV + G +++P + + PE + L Sbjct: 95 PTRTAQDALDAGAIGFIPKTMGAQSLLNAVRFMSAGEIYVPVELMREEASAPEHPL--LA 152 Query: 141 SLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAM 194 LS R+ E+L+ L G+SNKEI R LN+ T+K H+ +L R+L+ KNRTQAAM Sbjct: 153 QLSPREVEVLSGLCRGQSNKEIARDLNLQEVTIKLHVRTLCRKLDAKNRTQAAM 206 >UniRef50_Q0FFK6 DNA-binding response regulator, LuxR family protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FFK6_9RHOB Length = 205 Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 2/149 (1%) Query: 49 LVMLDGDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVE 108 L++LD + G L++ +P KV + + N+ + + +P+ + Sbjct: 50 LLILDYNMPGMNGLQGLERACTSYPATKVALMSGVANREIANNAMERHARGFIPKSLSAT 109 Query: 109 TFALAVNSAAMGMMFLPGDWRTTP--EKDIKDLKSLSARQREILTMLAAGESNKEIGRAL 166 +F A+ G +LP D ++ K+ D ++SAR+ + L L G SNKEI R L Sbjct: 110 SFINAIKFILSGERYLPFDLVSSAPASKNHDDFTNVSAREMQTLEQLCIGLSNKEIARNL 169 Query: 167 NISTGTVKAHLESLYRRLEVKNRTQAAMM 195 +I TVK H+++++ +L V NRTQAA+ Sbjct: 170 DIQEVTVKLHVKNIFSKLGVSNRTQAALF 198 >UniRef50_A5V5F9 Two component transcriptional regulator, LuxR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V5F9_SPHWW Length = 209 Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 19/206 (9%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPG--VSIQGA-SQADELWQKLESYPEALVMLD---GD 55 +I++ D + G+++S++ R PG V + G+ ++A+ L ++ +Y L++LD D Sbjct: 5 RILIADDHPLIREGIQLSIRARHPGHVVDVAGSIAEAEALIERNGAY--KLLLLDYELPD 62 Query: 56 QDGEFCYWLLQKTVVQFPEVKVLITATDCNK--RWLQEVIHFNVLAIV-PRDSTVETFAL 112 +G ++ LQ + + P +I+A D + Q V L+ P D+T+ + Sbjct: 63 ANGFGGFFRLQHLLGRTP--IAIISAHDSEQMVATTQAVGASGFLSKRQPLDATIAGIEI 120 Query: 113 AVNSAAMGMMFLPGDWRTTPEKDI--KDLKSLSARQREILTMLAAGESNKEIGRALNIST 170 + G P D+ K L SLS QR +L LA G+ NK+I L +S Sbjct: 121 ILG----GGRVFPASAGPDTHIDMLRKRLDSLSGAQRRVLLALAGGDLNKQIAADLGVSE 176 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 T+KAHL +++R+L V NRTQA +M+ Sbjct: 177 ATIKAHLSAIFRKLGVTNRTQAILMM 202 >UniRef50_Q1NJX6 Regulatory protein, LuxR:Response regulator receiver n=3 Tax=delta proteobacterium MLMS-1 RepID=Q1NJX6_9DELT Length = 218 Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 19/199 (9%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQG-ASQADELWQKLESYPEALVMLD---GDQD 57 +I + D +F G++ L+ G+ + G A A E Q + S +++LD GD D Sbjct: 12 RIYLIDDHQLFREGLQAILETH--GIDVVGSAGTAAEALQTVSSQRPDIILLDLHLGDAD 69 Query: 58 GEFCYWLLQKTVVQFPEVKVLITA---TDCNKRWLQEVIHFNVLAIVPRDSTVETFALAV 114 G C L +++ ++ +L+TA +D R LQ + +L +P VE A+ Sbjct: 70 GVDCIEPL-RSLCSAAKI-ILLTADESSDALNRGLQHDVDGYLLKTMPALKLVE----AI 123 Query: 115 NSAAMGMMFLP-GDWRTTP---EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIST 170 + A G + LP G R TP + ++ L+ R+REIL L+ G+SN EIG +IS Sbjct: 124 SDALTGAIVLPTGLKRQTPAPLQPSPENQYGLTPREREILHWLSEGKSNHEIGVITDISE 183 Query: 171 GTVKAHLESLYRRLEVKNR 189 TVK+H++ L + +V NR Sbjct: 184 NTVKSHVKKLMSKFKVNNR 202 >UniRef50_Q2W650 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W650_MAGSA Length = 213 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 6/200 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 M+I++ D +++ + L++ P S A + LE LVMLD G Sbjct: 1 MRIIIADDHPLYLEAVLGQLEKAFPAGSFHTARNLADTLALLERESVDLVMLDYSMPGMN 60 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + V I + + ++ I +P+ F AV G Sbjct: 61 GVEGIPTAIAAARGTPVAIMSGVADDDAVRACIAAGARGFLPKTLESRVFIQAVGLVGAG 120 Query: 121 MMFLPGDWRTTPEKDIK------DLKSLSARQREILTMLAAGESNKEIGRALNISTGTVK 174 ++P ++ P K D ++R+ E+L ++ AG SNKEI R L++ T+K Sbjct: 121 GTYVPAEFAALPSKPAAPATPTLDPSLFTSREMEVLALIVAGASNKEIARQLDLQEVTIK 180 Query: 175 AHLESLYRRLEVKNRTQAAM 194 HL ++++L VKNR+ AA+ Sbjct: 181 LHLTRIFQKLGVKNRSHAAV 200 >UniRef50_Q4KHB4 DNA-binding response regulator, LuxR family n=3 Tax=Pseudomonas RepID=Q4KHB4_PSEF5 Length = 216 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/155 (29%), Positives = 81/155 (52%), Gaps = 6/155 (3%) Query: 49 LVMLDGDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVE 108 LV+LD + G + + L Q+P++ V++ + + F +P+ S++E Sbjct: 54 LVLLDLNMPGAYGFSGLVLLRGQYPQIPVVMVSAQEEASVMVRSREFGASGFIPKSSSLE 113 Query: 109 TFALAVNSAAMGMMFLPG----DWRTTPEKDI--KDLKSLSARQREILTMLAAGESNKEI 162 AV S G ++ P + + E + L SL+ +Q +LTM+ G NK+I Sbjct: 114 VIQQAVRSVLDGDVWWPPQAFEEVSVSAEAKAASEGLASLTPQQFRVLTMVCEGLLNKQI 173 Query: 163 GRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLN 197 L++S T+KAH+ +++R+L V+ RTQAA++L Sbjct: 174 AYELSVSEATIKAHVTAIFRKLGVRTRTQAALLLQ 208 >UniRef50_Q0VLI2 Transcription regulator, putative n=1 Tax=Alcanivorax borkumensis SK2 RepID=Q0VLI2_ALCBS Length = 203 Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 7/194 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYP-EALVMLDGDQ--- 56 M+I++ D +F + I+L+ I Q L + P LV+LD Sbjct: 1 MKILIVDDHPLFADALSITLKNAYAEAMITTCEQPKWLLDNRQFLPLYDLVILDQTMPHL 60 Query: 57 DGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS 116 DG + L+ + V KVL+ + + ++ + V V + +VE A+ Sbjct: 61 DGLTLWSLIGRLV---GGAKVLVCSGSATEATVRRAVQLKVNGFVDKSESVEQILFAIRE 117 Query: 117 AAMGMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAH 176 G + +R ++ +L+ +Q ILTML G NKEI R L +S T+K H Sbjct: 118 IMAGRSYFSESFRLMAGAAPEEALTLTRQQLAILTMLQEGHGNKEIARQLFVSVNTIKTH 177 Query: 177 LESLYRRLEVKNRT 190 L LY +L+V NRT Sbjct: 178 LRLLYEKLDVPNRT 191 >UniRef50_Q0AL13 Two component transcriptional regulator, LuxR family n=1 Tax=Maricaulis maris MCS10 RepID=Q0AL13_MARMM Length = 201 Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/192 (27%), Positives = 91/192 (47%), Gaps = 4/192 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKL-ESYPEALVMLDGDQDGE 59 M+I++ D + + ++ L+ IP ++ +E+ + L + LV+LD G Sbjct: 1 MKILIADDHDLVLDAVRALLENDIPDAEVELVRSGNEVERSLSDGNRYDLVLLDLRMPGI 60 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 ++ + + + V I + + +Q ++ +P+ + AV Sbjct: 61 AGVQDVRDLMKRHADQPVAILSGMASPMEVQMLLENGARGFIPKTMPADGLVAAVRLILA 120 Query: 120 GMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLES 179 G +F P T PE + SL+ R+RE+L L GE+NKEI R+L I TVK HL S Sbjct: 121 GQVFSPIHHTTDPENEPA---SLTPREREVLFCLQRGEANKEIARSLEIQETTVKLHLRS 177 Query: 180 LYRRLEVKNRTQ 191 L +L+ +NRT+ Sbjct: 178 LSLKLDARNRTE 189 >UniRef50_Q1ZGB3 Nitrate/nitrite response regulator protein NarP n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZGB3_9GAMM Length = 211 Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 85/170 (50%), Gaps = 6/170 (3%) Query: 32 ASQADELWQKLESYPEALVMLDGDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQE 91 A +E + Y L++LD + G L++ Q K++I NK+ + Sbjct: 36 AKSGEEGLEFANQYQLDLILLDFNMQGISGLETLKRLRSQGHLTKIIILTVSDNKQDVIA 95 Query: 92 VIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGDW-----RTTPEKDIKD-LKSLSAR 145 +I+ +DS +N G + L D E +I++ L +L+ R Sbjct: 96 MINHGANGYFLKDSDASLLLSNINKVLAGELVLSDDLIKYLNDLDEEDNIREKLNNLTKR 155 Query: 146 QREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMM 195 +R+IL +A G+SNKEI L+IS GTVK H++SL ++L+ K+R +AA++ Sbjct: 156 ERQILQEIAKGQSNKEISINLHISEGTVKVHVKSLLKKLQAKSRVEAAIV 205 >UniRef50_A3U430 DNA-binding response regulator, LuxR family protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U430_9RHOB Length = 196 Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 73/146 (50%), Gaps = 6/146 (4%) Query: 49 LVMLDGDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVE 108 LV+LD G + L+ FP+V V + + + ++ + F +P+ + Sbjct: 49 LVLLDYRMPGMEAFDGLRLIRRAFPDVPVALISGAASPEVARQAMGFGASGFLPKTLAPD 108 Query: 109 TFALAVNSAAMGMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNI 168 AV+ G FLP E + SL+ R+ E++ +AAG SNKEI R L + Sbjct: 109 ELIRAVDRLVAGGTFLPD------EAVARMSFSLTPREVEVVRGIAAGYSNKEIARELGV 162 Query: 169 STGTVKAHLESLYRRLEVKNRTQAAM 194 TVK H+++L R+LE +NRT AAM Sbjct: 163 QEVTVKLHVKTLSRKLEARNRTHAAM 188 >UniRef50_A4YN74 Two-component transcriptional regulator, LuxR family (Modular protein) n=2 Tax=Bradyrhizobium RepID=A4YN74_BRASO Length = 293 Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 9/200 (4%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEA-LVMLDGDQDGEF 60 ++++ + +F ++ ++ +P + A+ D L P L++LD G Sbjct: 50 RLLIIEDHPLFREALENAISAALPDAEMLQATSIDTAIGLLSPPPGVDLILLDLSTPGTT 109 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + P +L+ + + R + V+ V V + ST E A A+NS G Sbjct: 110 GLSGVIRLRKSAPRTPILVVSAHQDPRLVAYVLSLGVAGYVSKSSTKEQLAHAINSVLRG 169 Query: 121 MMFLPGDWRTT-------PEKDI-KDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 + +PG R+ P +D+ K L L+ +Q +L + G NK+I L I T Sbjct: 170 DVHVPGSARSAEARRTRLPAQDLLKRLHDLTPQQLRVLDQIRCGLQNKQIAYELGICETT 229 Query: 173 VKAHLESLYRRLEVKNRTQA 192 VK H+ + R+L+V +RTQA Sbjct: 230 VKVHVSDILRKLQVTSRTQA 249 >UniRef50_Q5QUH5 Response regulator, LuxR family (CheY, HTH domains) n=2 Tax=Idiomarina RepID=Q5QUH5_IDILO Length = 207 Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 10/200 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEA----LVMLDGDQ 56 M++++ D Q M+ L Q + + Q + E ++ E+Y A L+ L+ D Sbjct: 1 MKVLIIDPQFF----MRAGLIQILTNYANQPSIYEAESFEIAENYLSADDYDLIFLEMDL 56 Query: 57 DGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS 116 LQ+ P +++ + +++V+ V + +P+DS+ E LA+ + Sbjct: 57 PDAEIRPALQRLKKVAPRTHIVLFTRPRSISEVRQVLAAGVRSYLPKDSSAEQAKLAIRA 116 Query: 117 AAMGMMFLPGDWRTTPEKDIKDLKS--LSARQREILTMLAAGESNKEIGRALNISTGTVK 174 G +P D +D LS RQ EI+ +LA G SNKEI L I+ GT++ Sbjct: 117 LLNGDRHIPDDPHLNEPRDKSSGAESFLSPRQLEIMQLLAQGLSNKEIANILGITEGTIR 176 Query: 175 AHLESLYRRLEVKNRTQAAM 194 HL ++++ ++V NRT+A + Sbjct: 177 VHLSAIFKAIKVSNRTEATL 196 >UniRef50_A3Y678 Response regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3Y678_9GAMM Length = 207 Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 48/197 (24%), Positives = 100/197 (50%), Gaps = 5/197 (2%) Query: 3 IVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQ-DGEFC 61 +++ D +F +K++L +S++ + Q+L +++LD D E Sbjct: 4 VLIADDHPLFRSALKVTLSGVEEDISLEETGGFKDTLQQLVRSDMDMLLLDLKMPDSEGL 63 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 L+ K +FP++ +++ + + + + ++EV LA + + + +E ++S G Sbjct: 64 LGLI-KLRSRFPQLAIVVISANEDPQIIKEVKAAGALAYINKSTPLEEIQSIISSVLKGN 122 Query: 122 MFLPGDWRTTPEKDI--KDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLES 179 P W + D + + L+ +Q +LTM+A G+ NK+I LN+ TVK H+ Sbjct: 123 CHFP-KWTSENTVDTVSEKIAQLTPQQFRVLTMIAKGDLNKQIAYQLNVKESTVKTHISE 181 Query: 180 LYRRLEVKNRTQAAMML 196 ++++L + NRTQAA+ + Sbjct: 182 IFKKLGIINRTQAALFV 198 >UniRef50_C6P401 Two component transcriptional regulator, LuxR family n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P401_9PROT Length = 228 Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 49/206 (23%), Positives = 100/206 (48%), Gaps = 14/206 (6%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEA-LVMLDGDQDGE 59 ++++M D ++F GM+ LQQ V I + + Q + P+ L +LD + G Sbjct: 3 IKVLMADDHALFRDGMRYVLQQLADEVEILDSGNFQDALQLVHDNPDVDLALLDLNMPGS 62 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 +Q ++ P++ +++ + ++ ++ V+ + + + S+ + A+ Sbjct: 63 EGVPSIQFFHLRHPDIPLVVVSGSDHRDDIESVMESGAMGFISKMSSSKIMLSALRMVLE 122 Query: 120 GMMFLPGDWRTTPEKDIKDLKSLSA-------------RQREILTMLAAGESNKEIGRAL 166 G ++LP ++ +SLS+ RQ E+LT LA+G +NKEI + + Sbjct: 123 GGVYLPPQLLQQAVNNVDQGESLSSKRSQRAAKFGLTSRQLEVLTYLASGLANKEISKRM 182 Query: 167 NISTGTVKAHLESLYRRLEVKNRTQA 192 N++ GTVK H ++Y+ L +R +A Sbjct: 183 NLAEGTVKIHTAAVYQALHANSRLEA 208 >UniRef50_Q15NL1 Two component transcriptional regulator, LuxR family n=3 Tax=Alteromonadales RepID=Q15NL1_PSEA6 Length = 212 Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 8/203 (3%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEA-LVMLDGDQDGEF 60 + ++ D +F + +L + I + D L P+ L++LD G Sbjct: 3 KFLIADDHPLFREALVGALSPLFEDIEILQSDSLDSTLMTLHENPDIDLILLDLHMPGCE 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ L + +PE+ V + + + + V+ F VP+ S A A+ + G Sbjct: 63 NFYGLIRVTQDYPEIPVAVVSASDSIEVVSYVMSFGAKGFVPKSSPTLMIADALKTIMSG 122 Query: 121 MMFLPGDWRT-TPEKDIKDLK------SLSARQREILTMLAAGESNKEIGRALNISTGTV 173 ++L + + + D ++L L+ +Q ++L ++ G NK+I LN++ TV Sbjct: 123 EIWLTEELKAQIAQIDGEELNLAQRIAELTPKQFQVLKLIHDGLLNKQIAHELNVTEATV 182 Query: 174 KAHLESLYRRLEVKNRTQAAMML 196 KAH+ +++R+LEV RTQA ++L Sbjct: 183 KAHISAVFRKLEVNTRTQAVLLL 205 >UniRef50_A6V8B9 DNA-binding response regulator, LuxR family n=9 Tax=Pseudomonas RepID=A6V8B9_PSEA7 Length = 210 Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 57/198 (28%), Positives = 99/198 (50%), Gaps = 8/198 (4%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLE--SYPEALVMLDGDQDGE 59 +I++ D +F GM +LQ+ +P S++ A + E P++L+ LD G Sbjct: 4 RIIVADDHPLFREGMLRTLQRLLPDASLEEAGDLAGVVHLAEQGEEPDSLI-LDLRFPGL 62 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFA---LAVNS 116 LL +FP +++ + + + + EV+ V + + E LA+ + Sbjct: 63 TRIDLLADLRRRFPRTALIVVSMVDDPQLIAEVMDAGVDGFLGKSIAPEELGEAILAIRA 122 Query: 117 AAMGMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAH 176 + + + P P + L L+ RQ ++L +LA G+SNKEIGR L+IS TV+ H Sbjct: 123 GEVLVRYEPSGL--LPLESSALLDGLTERQLDVLRLLAQGKSNKEIGRVLDISHYTVRIH 180 Query: 177 LESLYRRLEVKNRTQAAM 194 + SL + L+V +RT AA+ Sbjct: 181 VSSLLKALDVPSRTAAAV 198 >UniRef50_A4TWP9 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TWP9_9PROT Length = 222 Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 92/204 (45%), Gaps = 11/204 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADE-LWQKLESYPEALVMLDGDQDGE 59 M+I++ D ++ G+ LQ+ S+ A DE L + ++ L +LD + G Sbjct: 4 MEILLADDHAMVRDGLVPFLQRVTDNASVLEAGSFDEALIKARQASNLGLTILDLNMPGM 63 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 L +FP V V+I + + I +P+ ET + Sbjct: 64 DGLNGLATMRAEFPHVPVVILSGSTHPADAFHSIESGANGFIPKTMRGETIIGVLRLVLS 123 Query: 120 GMMFLPG---DWRTT-----PEKDIKD--LKSLSARQREILTMLAAGESNKEIGRALNIS 169 G ++P D+ T PE K L LSAR+ EIL M+ G NK I RA + Sbjct: 124 GEKYVPPFLFDYHETMNRKEPENTGKSGPLAVLSAREMEILGMIVDGAPNKVIARAFELQ 183 Query: 170 TGTVKAHLESLYRRLEVKNRTQAA 193 TVKAHL +++R++ V NRT+AA Sbjct: 184 EVTVKAHLRNIFRKIAVSNRTEAA 207 >UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0L7_PELTS Length = 223 Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 83/174 (47%), Gaps = 10/174 (5%) Query: 32 ASQADELWQKLESYPEALVMLDGDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQE 91 AS +E + + ++++D + L+ +P+++V+I + + Sbjct: 39 ASNGEEALKAIARLKPTMILMDVNMPKMDGIQALKAIKTNYPDIQVIILTVHNQHEKVVQ 98 Query: 92 VIHFNVLAIVPRDSTVETFALAVNSAAMGMMF---------LPGDWRTTPEKD-IKDLKS 141 I A V +DS E V S A G F L + TP + K+L Sbjct: 99 AIRDGCSAYVLKDSPPEQLIEVVESVAEGRYFVDTSIANELLVNLVQGTPRRQHPKNLPL 158 Query: 142 LSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMM 195 L+ R++E+L ++ G SNKEI LNI+ TVKAH+ S+ +L V +RTQAA++ Sbjct: 159 LTLREKEVLQLIVNGLSNKEIAGKLNITLRTVKAHVSSILMKLNVNDRTQAAVL 212 >UniRef50_Q16BU6 Transcriptional regulator, LuxR family, putative n=6 Tax=Rhodobacteraceae RepID=Q16BU6_ROSDO Length = 239 Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 48/207 (23%), Positives = 102/207 (49%), Gaps = 16/207 (7%) Query: 3 IVMFDRQSIFIHGMKISLQQRIPGVSIQGASQ-ADELWQKLESYPEALVMLD---GDQDG 58 I++ D ++ ++ +L+ + V I+ A D + + LVM D D G Sbjct: 16 ILIVDDHPLYSDALESALELVLTDVDIRKAQNLGDAIAAVKGGFKPELVMFDLKLPDVTG 75 Query: 59 EFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAA 118 + L++ P+ ++L+ ++ + +Q ++ +P+D++ ++ Sbjct: 76 ISGFVSLRQ---HLPKARILVISSLASFDLVQSLLREGAAGFLPKDTSARGLKSVLSDII 132 Query: 119 MGMMFLPGDWR--TTPEKDI-------KDLKSLSARQREILTMLAAGESNKEIGRALNIS 169 G ++P D++ + E+D L L+ +Q+ I+ ++ G+ NK+I L+++ Sbjct: 133 AGQTYVPKDYQQPNSCERDALADEFQHPKLAELTPQQQRIMRLICCGKPNKQIAYELDLA 192 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMML 196 TVKAH+ +L RRL V+NRTQA +++ Sbjct: 193 EATVKAHITALLRRLGVRNRTQAVVLV 219 >UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria RepID=Q3Z7M1_DEHE1 Length = 232 Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 18/205 (8%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESY-PEALV---MLDGDQ 56 + IV+ D I HG+K L+ + AS E +ES P LV M+ G Sbjct: 2 ISIVLADDHQIVRHGLKALLEAEADFEVVGEASDGIEAVNLVESLQPGVLVTDLMMGGMS 61 Query: 57 DGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS 116 E Y +++++ P+ V+I + N+ ++ E + A V +DST E +V Sbjct: 62 GIEVTYQVVKRS----PKTAVVILSMYGNEAYVHEALRAGARAYVLKDSTSEELVRSVRE 117 Query: 117 AAMGMMFLPGDW----------RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRAL 166 A G +L ++ + ++L+ R+RE+L ++A G + EI L Sbjct: 118 AVQGHRYLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAERL 177 Query: 167 NISTGTVKAHLESLYRRLEVKNRTQ 191 IS TV+ H ++ R+L+++N+TQ Sbjct: 178 FISPRTVEVHRANMMRKLDLRNQTQ 202 >UniRef50_B1L0K3 DNA-binding response regulator, LuxR family n=22 Tax=Bacteria RepID=B1L0K3_CLOBM Length = 217 Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 13/148 (8%) Query: 61 CYWLLQKTVV--QFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAA 118 C +L ++ QFP +K+LI T +K ++ E + F + +DS+ E + + Sbjct: 62 CDGVLGTRIIKEQFPHIKILILTTFNDKEYIHEALKFGASGYLLKDSSNELIYEGIKACV 121 Query: 119 MGMMFLPGD------WRTTPEKDIKD----LK-SLSARQREILTMLAAGESNKEIGRALN 167 G + + D TT EK++ D LK +L+ R+ I+ +A G SNKEI + Sbjct: 122 KGNVVVHPDVANNIILNTTYEKELNDDDINLKYNLTEREINIIRQIANGLSNKEIAEKIY 181 Query: 168 ISTGTVKAHLESLYRRLEVKNRTQAAMM 195 +S GT+K ++ ++ +L++++RTQ A+ Sbjct: 182 LSEGTIKNNISTILSKLDLRDRTQIAIF 209 >UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=Q1AVR6_RUBXD Length = 220 Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 17/208 (8%) Query: 1 MQIVMFDRQSIFIHGMK--ISLQQRIPGVSIQG-ASQADELWQKLESYPEALVMLDGDQD 57 +++++ + Q++ G++ + L++ GV + G A+ E ++L +V++D Sbjct: 5 VRVMIVEDQALMREGLRTLLDLEE---GVEVVGEAADGVEALERLPGARPEVVLVDVRMP 61 Query: 58 GEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSA 117 L+++ + PEV +I T + ++ + + +D+ E A A+ Sbjct: 62 RMDGIQLIERLGREHPEVAAIILTTFDDDEYVFRGLRAGARGYILKDTPSEELAAAIEKV 121 Query: 118 AMGMMFLPGD-----------WRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRAL 166 G L G P LS R+ E+L ++A+G SN+EI RAL Sbjct: 122 HRGEAVLDGPITLKVISELGRLSKGPAGPQPGSGGLSEREMEVLRLVASGASNREIARAL 181 Query: 167 NISTGTVKAHLESLYRRLEVKNRTQAAM 194 I+ GTVK H+ S+ R+L ++RTQAA+ Sbjct: 182 YITEGTVKNHISSILRKLGFRDRTQAAL 209 >UniRef50_B9MPQ9 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=B9MPQ9_ANATD Length = 211 Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 53/208 (25%), Positives = 104/208 (50%), Gaps = 23/208 (11%) Query: 2 QIVMFDRQSIFIHGMKISLQ-QRIPGVSIQGASQADELWQKLESYPEALVMLD------G 54 ++++ D + G+KI L+ + VS+ + A E + LE +V++D Sbjct: 5 KVLIVDDNPAVLDGLKIILELENFEVVSL--CTNAKEAIEFLEKKHADVVLMDIRMPVMD 62 Query: 55 DQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAV 114 +G F +FP VKV+I T C + ++++ + F + + S + ++ Sbjct: 63 GIEGTF------NIKTKFPNVKVIILTTFCEEDYIKKSLSFGADGYILKSSDAKHIVNSI 116 Query: 115 NSAAMG--------MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRAL 166 S G +++ + T ++ ++ ++L+ R+ EI +++ G SNKEI R L Sbjct: 117 LSVLDGKVVMDKEIALYISDVLKRTSKQLLEKTQNLTERELEIAKLISQGYSNKEIARML 176 Query: 167 NISTGTVKAHLESLYRRLEVKNRTQAAM 194 IS GTV+ ++ S+ ++L +KNRTQ A+ Sbjct: 177 FISEGTVRNYITSILQKLNLKNRTQIAV 204 >UniRef50_A3V1C5 Two component transcriptional regulator, LuxR family n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V1C5_9RHOB Length = 204 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 5/165 (3%) Query: 35 ADELWQKLESY----PEALVMLDGDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQ 90 +D L LE P ++VMLD G ++K V + V++ + + + + Sbjct: 32 SDSLSSTLEKIISEPPYSIVMLDLRMPGMDGINSIKKVVDAAGDANVVLFSANADTHTVA 91 Query: 91 EVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGDWRTTPEKDIKDLKSLSARQREIL 150 I V +VP+ +++ + G MF+P + R TP D + LS + +L Sbjct: 92 RAIEVGVRGLVPKTLPLQSLGSVLRLIQSGQMFIPAENRITP-GDARGQSLLSESELAVL 150 Query: 151 TMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMM 195 M A+G +NK I L+++ +K H+ ++ R+L +NR AAM+ Sbjct: 151 QMAASGMTNKHIANNLDMNEARIKMHMRTICRKLGARNRAHAAMI 195 >UniRef50_C4RI73 Two-component system response regulator n=6 Tax=Actinomycetales RepID=C4RI73_9ACTO Length = 217 Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 15/206 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLD---GDQD 57 ++IV+ D ++ G+++ L+ P + + + E ++ + +V+LD D D Sbjct: 2 VRIVVVDDDALVRSGLRLILRV-APDIEVVATASGAEAIDEITRHRPDVVLLDIRMPDVD 60 Query: 58 GEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSA 117 G L Q + P ++T D ++ ++ + + +D+ E A V + Sbjct: 61 G--LTVLRQVRAMPHPPTVAMLTTFDADE-YITTALRIGAAGFILKDTHPEHLAQLVRAL 117 Query: 118 AMGMMFLPG-------DWRTTPEKDIKD-LKSLSARQREILTMLAAGESNKEIGRALNIS 169 A G + L DWR +D + L+ R+REIL +A G SN EIG + +S Sbjct: 118 AAGAVVLSPKVSRTVVDWRVENGEDAASAIARLTDREREILVHVADGLSNAEIGTRMYLS 177 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMM 195 GTVK H+ ++ +L+V +R QAA++ Sbjct: 178 GGTVKDHVSAILTKLKVTSRVQAALI 203 >UniRef50_B2J2N1 Two component transcriptional regulator, LuxR family n=12 Tax=Cyanobacteria RepID=B2J2N1_NOSP7 Length = 232 Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 108/214 (50%), Gaps = 22/214 (10%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKL--ESYPEALVMLD---GD 55 +++++ D QS+ G+K L+Q P + + G ++ ++ +L E P+ +V++D + Sbjct: 9 IRLLIVDDQSLIRQGLKAMLEQE-PDLEVVGDAENGKVALELVAELQPD-VVLMDIRMPE 66 Query: 56 QDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVN 115 DG L+ ++ FP +KVL+ +T + +L + + +D A A+ Sbjct: 67 MDGRTATKLIMQS---FPNIKVLVLSTFDDDSYLTGAMRAGAKGYLLKDMPSSELADAIR 123 Query: 116 SAAMG-MMFLPGDW---------RTTPEKDIKDLK--SLSARQREILTMLAAGESNKEIG 163 G F PG + + ++ K ++AR++E+L ++ G +N+EI Sbjct: 124 FGHSGYTQFGPGLFDKLLVTEAASASANQNSASSKPSEITAREQEVLCLIGVGATNREIA 183 Query: 164 RALNISTGTVKAHLESLYRRLEVKNRTQAAMMLN 197 + L I+ GTVK H+ S+ RL +KNR+Q A+ N Sbjct: 184 QQLYITEGTVKTHVTSILSRLNLKNRSQLAIYAN 217 >UniRef50_C9RXQ8 Two component transcriptional regulator, LuxR family n=3 Tax=Geobacillus RepID=C9RXQ8_GEOSY Length = 200 Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 92/193 (47%), Gaps = 8/193 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGAS-QADELWQKLESYPEALVMLDGDQDGE 59 + I++ + + G++ L +R P + + GA EL +++ + ++++D E Sbjct: 4 INILIIGDHGLVMDGIR-QLLEREPDLEVVGAVFSPAELEKEIAHFQPDIIVIDAPSQRE 62 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 + +FP KV++ + D + ++Q V A V + + ET A+ + Sbjct: 63 NYLIWTKNISSRFPASKVVMLSGDASAEYVQAVHEAGAYAFVSKCDSAETLIHAIRESYR 122 Query: 120 GMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLES 179 G+ P D D L+ + +L ++A ++N+EIG LNIS TV+ H+ S Sbjct: 123 GVKSFPTDLA------FHDGSPLTEMELAVLDLIARDKTNREIGEQLNISKRTVEHHVSS 176 Query: 180 LYRRLEVKNRTQA 192 + R+L VK+R A Sbjct: 177 ILRKLHVKSRAGA 189 >UniRef50_A4BAF0 Two-component system, response regulator n=1 Tax=Reinekea blandensis MED297 RepID=A4BAF0_9GAMM Length = 218 Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 20/211 (9%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQD---- 57 +I++ D +F +K+SL Q ++Q A Q E LE EAL L + + Sbjct: 3 RILIVDDHPLFRDALKLSLTQSTGPHALQAAGQI-EFSSSLE---EALSFLKQNAEVDLV 58 Query: 58 -------GEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETF 110 G + L + +P + VL+ + + + + + + + E+ Sbjct: 59 LLDLHLPGNDGFLGLLEVRKLYPAIAVLVISGNDDPSIIAKARACGAAGFISKSLAAESI 118 Query: 111 ALAVNSAAMGMMFLPGDWRTTPEKDIKDL----KSLSARQREILTMLAAGESNKEIGRAL 166 AV S G + P D +P+ +++D+ L+ +Q +L L G NK+I L Sbjct: 119 LHAVQSVLQGDEYWP-DIDLSPDSELEDIARRINELTDQQLRVLRHLQDGRLNKQIAYDL 177 Query: 167 NISTGTVKAHLESLYRRLEVKNRTQAAMMLN 197 +IS TVKAH+ +++R+L V NRTQA ++ N Sbjct: 178 DISEATVKAHVTAIFRKLNVLNRTQAVILAN 208 >UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NIZ3_ROSCS Length = 230 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 14/182 (7%) Query: 25 PGVSIQGASQADELWQKLE---SYPEALVMLDGDQDGEFCYWLLQKTVVQFPEVKVLITA 81 PG+ + G +AD L+ +P LVM+D ++ P + +++ Sbjct: 37 PGIEVVG--EADNGAAALDFVARHPVDLVMMDLQMPVIDGIEATRRIKALHPAIGIIMVT 94 Query: 82 TDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGDW---------RTTP 132 L E + V + +D++ AV G FL D TP Sbjct: 95 VQAKPDALMEALRAGVAGYLLKDASRREIIGAVRQVLRGEAFLNPDLVLQTLRRLAHATP 154 Query: 133 EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQA 192 D ++ L+ R++++L +L G++N+EI R L IS GTVK H+E + +L V +RTQA Sbjct: 155 TDDATPIEPLTPREQQVLRLLMQGKTNREIARELIISPGTVKVHVEHIIAKLGVSDRTQA 214 Query: 193 AM 194 A+ Sbjct: 215 AV 216 >UniRef50_C1I7X4 Two-component system response regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I7X4_9CLOT Length = 226 Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 89/171 (52%), Gaps = 11/171 (6%) Query: 35 ADELWQKLESYPEALVMLDGDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIH 94 +EL +++Y +++LD + G+ L+ + +P++KV++ + +K+ + E I Sbjct: 40 GEELLNNMKNYNPDVILLDINMPGKNGIETLKTLKILYPDIKVVMLTVENDKKTIMESID 99 Query: 95 FNVLAIVPRDSTVETFALAVNSAAMGMMFLPG--------DWRT---TPEKDIKDLKSLS 143 A + ++S A+ + +G ++ D ++ K+I+ LK L+ Sbjct: 100 IGADAYILKESAGSEIVNAIRNVYLGEKYIDKSLIKAIFLDIKSDVACKNKEIESLKLLT 159 Query: 144 ARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAM 194 R+ IL ++ G NKEI L +S TVK ++ S+++++EV++R QA + Sbjct: 160 NRELNILYEISKGLKNKEIAEKLFLSEKTVKNYITSIFKKIEVEDRVQATI 210 >UniRef50_C3K952 Putative two-component system, response regulator n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K952_PSEFS Length = 218 Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 97/195 (49%), Gaps = 7/195 (3%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEA-LVMLDGDQDGEF 60 +I++ D +F GM ++++ IP I+ A DE+ S E ++LD G Sbjct: 10 RIIVADDHPLFREGMLRTIERLIPTAIIEQAGNLDEVLALARSGAEVDSLILDLRFPGIT 69 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ + +F +++ + + + +VI + ++ A A+ + G Sbjct: 70 SMQVIGQLRNEFKRTSIIVVSMIDDLEIISQVIAQGADGFIGKNVDPTGIAEAIMAIREG 129 Query: 121 MMFLPGDWRTTPEKDIKD--LKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLE 178 + + + PE + D L SL+ARQ+++L ++AAG++NKEI R L IS TV+ H+ Sbjct: 130 EVVV----KYNPENPLLDPSLSSLTARQKQVLGLIAAGKTNKEIARQLGISPFTVRIHVS 185 Query: 179 SLYRRLEVKNRTQAA 193 +L++ L V R AA Sbjct: 186 TLFKTLGVPTRAAAA 200 >UniRef50_B6IS43 Transcriptional regulator, LuxR family protein n=1 Tax=Rhodospirillum centenum SW RepID=B6IS43_RHOCS Length = 221 Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 6/138 (4%) Query: 64 LLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMF 123 +L V V VL+ + D ++ + ++P+ + E A+ G+ Sbjct: 79 VLAALVRDVAPVPVLLLSGDAGPGAVRAAVSAGARGLLPKSAGPEALEHAIALVLTGVDL 138 Query: 124 LP------GDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHL 177 +P G LK L+ARQREI +L G SNKE+ R L + GTVK H+ Sbjct: 139 IPLPRFPHGRADGIGLSPTDRLKRLTARQREIYDLLREGRSNKEMARRLGMREGTVKVHV 198 Query: 178 ESLYRRLEVKNRTQAAMM 195 ++ ++L+V NRTQAA++ Sbjct: 199 RTILQKLDVHNRTQAALL 216 >UniRef50_P94439 Uncharacterized transcriptional regulatory protein yfiK n=4 Tax=Bacillales RepID=YFIK_BACSU Length = 220 Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 19/211 (9%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D Q I G+ LQ R I A E ++K + +V++D Sbjct: 2 IKIIITDDQDIVREGLASLLQLREELDVIATARNGQEAFEKAKELEPDIVLMDIRMPVSN 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + P VKVL+ T + + E + + +D + +T AV + G Sbjct: 62 GVEGTKLITSSLPSVKVLMLTTFKDSALIAEALEEGASGYLLKDMSADTIVKAVMTVHSG 121 Query: 121 MMFLP--------GDWRTTPEKDIK---------DLKSLSARQREILTMLAAGESNKEIG 163 M LP +W+ EK +K +L L+ R+ E+L L G +NKEI Sbjct: 122 GMVLPPELTAQMLNEWKR--EKQLKGINEIEKPNELLDLTEREIEVLAELGYGLNNKEIA 179 Query: 164 RALNISTGTVKAHLESLYRRLEVKNRTQAAM 194 L I+ GTVK H+ ++ +L V++RTQAA+ Sbjct: 180 EKLYITEGTVKNHVSNIISKLAVRDRTQAAI 210 >UniRef50_C6QEY3 Two component transcriptional regulator, LuxR family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QEY3_9RHIZ Length = 225 Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 11/203 (5%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLES-YPEALVMLDGDQDGEF 60 +I++ D +F+ ++ ++ P A D + LES P +V+LD G Sbjct: 6 RILIVDDHPLFVEALQRAIVGACPDTETHDAVSIDAAKKVLESKTPFDIVLLDLALPGTR 65 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + L + P + +++ + + R +Q+V+ + + + + A A+ G Sbjct: 66 GFEGLLELRKLHPSLPIVVVSALEDPRIVQDVMRYGAAGFISKSADRSEIASALKDVMEG 125 Query: 121 MMFLPGDWRTTPEKD---------IKDLKSLSARQREILTMLAAGESNKEIGRALNISTG 171 + LP ++ PE + LK L+ +Q +L ML G NK+I L I Sbjct: 126 SLTLPKGYKP-PEAPTNAEARGDLVHRLKMLTPKQLSVLRMLRQGLLNKQIAHELQIEET 184 Query: 172 TVKAHLESLYRRLEVKNRTQAAM 194 TVKAH+ + R+L V +RTQA + Sbjct: 185 TVKAHVSEILRKLNVSSRTQAVI 207 >UniRef50_A7HTS6 Two component transcriptional regulator, LuxR family n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HTS6_PARL1 Length = 215 Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 10/204 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 M+I++ Q IF G+ + + G +++ + L L+ LV+LD Sbjct: 1 MRILVTGEQPIFCEGLSSIVNRLYAGATVRVVAGPRSL-SGLDVGTAELVLLDIGAGQAP 59 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L V E KV++ + ++++V+ V VP+ V A+ +G Sbjct: 60 SGADLLSDFVSRTEAKVVVFSDRSAPGYIRQVMDLGVAGFVPKTIGVTLVESALRLIELG 119 Query: 121 MMFLP---------GDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTG 171 ++P G TT + L+ RQRE+L L G SN+EI L IS Sbjct: 120 GRYIPDILLTAHAEGFAETTDSFLGAGHEKLTPRQREVLLELGKGRSNQEIAHVLGISIA 179 Query: 172 TVKAHLESLYRRLEVKNRTQAAMM 195 TVK H+ ++ + L V+NRT+AA++ Sbjct: 180 TVKLHVNAILQTLGVRNRTEAAII 203 >UniRef50_B9QY19 Sigma-70, region 4 family n=2 Tax=Alphaproteobacteria RepID=B9QY19_9RHOB Length = 234 Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 13/207 (6%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEA---LVMLDGDQDG 58 + ++ D +F + +++ P A+ DE Q L+ +A L +LD G Sbjct: 10 KFLIIDDHPLFREALHSAVELAYPNSDTLDAASLDEANQILQD--DAGFDLALLDLSMPG 67 Query: 59 EFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAA 118 L +P + V++ + + + +V+ + +P+ S T A A+ Sbjct: 68 VKGMDGLLHLRTHYPRLPVVVVSGAEDPPIIAQVLAYGAAGFIPKSSKKTTLADAIQQVM 127 Query: 119 MGMMFLPGDWRTTPEKDIKD--------LKSLSARQREILTMLAAGESNKEIGRALNIST 170 G +++P + E + D L SL+ +Q +L M+ G NK+I L++ Sbjct: 128 NGAVYVPETYADGAEDPLDDDTRKMIERLSSLTPQQIRVLQMICNGLLNKQIAYELSVGE 187 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMMLN 197 TVKAH+ + R+L V +RTQA + +N Sbjct: 188 TTVKAHVSEILRKLSVSSRTQAVIEVN 214 >UniRef50_A4VUX0 DNA-binding response regulator, putative n=5 Tax=Firmicutes RepID=A4VUX0_STRSY Length = 199 Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 48/201 (23%), Positives = 98/201 (48%), Gaps = 18/201 (8%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADE---LWQKLESYPEALVMLDGDQD 57 M+I++ D S+F + +++ Q P + I + DE ++ K+ Y +++LD + D Sbjct: 1 MKILLIDDHSLFAESLALTIHQYQPDIHIDIMNDEDEFKSIFSKVIEY--QVILLDINLD 58 Query: 58 GEFC---YWLLQKTVVQFPEVKV-LITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALA 113 +F + + Q + ++P+ K+ L+T D + + V A VP++ + + Sbjct: 59 NKFSTDGFGIAQDILEEYPDSKIALLTGFDL-PVYEYQAQKLGVKAFVPKNISSKRLIQI 117 Query: 114 VNSAAMGMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 + + G + P E L+ R++EIL L GE K+I ++L IS T+ Sbjct: 118 LKDISYGKNYFPNQNYFIDE--------LTEREKEILIHLGNGEKRKDIAKSLYISDRTL 169 Query: 174 KAHLESLYRRLEVKNRTQAAM 194 H++++ +LEV + +A + Sbjct: 170 TNHIQNILEKLEVDSTLKAVI 190 >UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ8_HALOH Length = 209 Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 14/203 (6%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADE--LWQKLESYPEALVM---LDGD 55 +Q+ + D + G+K L R G+ I G S E + + + PE V+ L G Sbjct: 2 IQVYLVDDHPFVLQGLKAYLNTR-EGIEIVGTSGNGEKAIKEIAKLNPEVAVVDLRLPGL 60 Query: 56 QDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVN 115 E + +K P +V+I ++ + + E I L+ V +DS E A+ Sbjct: 61 NGIEVTREIKKKN----PGTEVIILSSFNKEDEVIEAIDAGALSYVMKDSRPEKLVEAIK 116 Query: 116 SAAMGMMFL-PGDWRTTPEKDIKD---LKSLSARQREILTMLAAGESNKEIGRALNISTG 171 +A G L PG + ++ + + L+ R++E+L L G SN++I + L IS Sbjct: 117 AARRGEPVLTPGVAKKIMKRAARKGRKTEPLTPREKEVLACLVRGNSNRDIAKTLCISET 176 Query: 172 TVKAHLESLYRRLEVKNRTQAAM 194 TVK H+ ++ ++L+VK+RTQA + Sbjct: 177 TVKTHVSNILKKLDVKDRTQAVI 199 >UniRef50_A9VYG0 Regulatory protein LuxR n=7 Tax=Alphaproteobacteria RepID=A9VYG0_METEP Length = 216 Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 17/209 (8%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQ---D 57 ++I++ D Q F ++ +L+ + G+ + S + EL L S + +++ G + Sbjct: 2 LRIIIADDQRNFRIVLRRTLELNLSGIIVVDVSNSSELINSLRSPLKTDLVIVGSRLLPA 61 Query: 58 GEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSA 117 G+ Y K ++L+ + Q+ + ++ R E AV + Sbjct: 62 GDPTYLGALKRAAG--TARLLLVVPHASADLFQDALSLGFHGLIVRRQRHEEMLEAVRTT 119 Query: 118 AMGMMFLP-----------GDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRAL 166 G ++ P G PE+ ++ L+ RQRE+L ++ G SN+EI AL Sbjct: 120 LDGRLYAPTTILAVKPPDAGAGLRQPERSVRTF-GLTLRQREVLALIGKGLSNREIAIAL 178 Query: 167 NISTGTVKAHLESLYRRLEVKNRTQAAMM 195 +I+ TVK H+ ++ R L V+NRT+AA++ Sbjct: 179 SIAEATVKIHVSAVIRMLGVRNRTEAALL 207 >UniRef50_A3WDJ9 Two-component response regulator n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WDJ9_9SPHN Length = 217 Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 11/117 (9%) Query: 88 WLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGDW---------RTTPEKDIKD 138 +++E + V +D+ + A+N G LP D R P+ D+ Sbjct: 91 YVREALAAGAAGYVLKDTEIGDLRAAINQVMAGQSALPLDLVSAAMRAENRPEPKGDLSQ 150 Query: 139 LKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMM 195 + L++R++E++ ++A G +NKEI R L+IS TVK H+E L +L V +RTQAA+M Sbjct: 151 I--LTSREQEVVELVAEGLTNKEIARKLDISPATVKVHVERLIGKLGVADRTQAAVM 205 >UniRef50_D2S858 Two component transcriptional regulator, LuxR family n=2 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S858_9ACTO Length = 270 Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 62/213 (29%), Positives = 110/213 (51%), Gaps = 23/213 (10%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLE--SYPEALVMLDGDQDG 58 M++++ + Q IF G+++ + + P +++ ++ L + LE P V++ Q Sbjct: 58 MRVLLCEDQEIFRLGLRVVFEAQ-PDIAV--VAETSHLTEALEVADGPGTQVVVV-RQGL 113 Query: 59 EFCYWL-LQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS- 116 C L L + + Q VL+ A L +V+ V +PR +T + A AV + Sbjct: 114 VGCSGLPLLRDLCQR-ATGVLVLAETGGDSGLMDVLQAGVRGFLPRRATAQRLADAVRAL 172 Query: 117 --------AAMG---MMFLPGD-WRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGR 164 +A+G + + GD +TT E + L L+ RQR++ T++A G SN+EI Sbjct: 173 ARQETALDSAVGRQLVRHMTGDPSQTTAEG--RALDRLTERQRDVATLVAEGLSNEEIAS 230 Query: 165 ALNISTGTVKAHLESLYRRLEVKNRTQAAMMLN 197 L +S TVK+HL ++ RRL+++ RTQ A++L Sbjct: 231 RLFLSPATVKSHLTAVMRRLDIRTRTQLAILLT 263 >UniRef50_A8MF72 Two component transcriptional regulator, LuxR family n=14 Tax=Clostridia RepID=A8MF72_ALKOO Length = 224 Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 53/207 (25%), Positives = 104/207 (50%), Gaps = 16/207 (7%) Query: 1 MQIVMFDRQSIFIHGMK--ISLQQRIPGVSIQG-ASQADELWQKLESYPEALVMLDGDQD 57 + +++ D ++ G+K I L+ P + + G A+ +E K + +V+LD Sbjct: 11 INVLIADDHALVRQGLKQIIELE---PDIKVIGLAADGEEAVLKTQQLSPDVVLLDISMP 67 Query: 58 GEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSA 117 + L++ +K+++ ++ +L E I+ V +D+ E+ A+ Sbjct: 68 KQNGIQTLRRLKDMDSTIKIIMLTFHEDREYLFETINLGANGYVLKDAESESLIKAIRDV 127 Query: 118 AMGMMFLPGDWRTTPEKDI--KDLKS--------LSARQREILTMLAAGESNKEIGRALN 167 G+ ++ T K+ +++KS L+ R+ E+LT+LA G +NKEIG L Sbjct: 128 YQGLNYIYPTLATELVKEFNRREVKSQKRNNEDELTRREYEVLTLLAEGINNKEIGDCLF 187 Query: 168 ISTGTVKAHLESLYRRLEVKNRTQAAM 194 IS TVK H+ ++++++ V +RTQAA+ Sbjct: 188 ISEKTVKNHVSNIFKKINVNDRTQAAI 214 >UniRef50_A6UGI4 Two component transcriptional regulator, LuxR family n=3 Tax=Alphaproteobacteria RepID=A6UGI4_SINMW Length = 229 Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 16/206 (7%) Query: 4 VMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLE-SYPEALVMLD---GDQDGE 59 ++ D ++ + +++ I+ A+ E Q+L + L+MLD D G Sbjct: 17 LVIDDHPLYCDALAATMESTFNTRRIRTATSLSEALQQLRLRFSPDLIMLDLNLPDASGL 76 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 + +++ + P++ V++ + + +Q V+ +P+D F A+ Sbjct: 77 SGFLKIKE---KMPDIPVIVISAFTSHDVVQSVMAAGAAGFIPKDIDRHNFQEAMQDIWN 133 Query: 120 GMMFLPGDW----RTTP-----EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIST 170 G ++P + R T E + + LS +Q IL+++ G NK I + ++ Sbjct: 134 GKTYVPPGYAVQARATAADQSAETISRKIAHLSQQQTRILSLICEGMPNKLIAYEMQLAE 193 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 TVKAH+ +L RRL V NRTQAAM++ Sbjct: 194 ATVKAHITALLRRLGVHNRTQAAMLV 219 >UniRef50_B9YZJ3 Two component transcriptional regulator, LuxR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YZJ3_9NEIS Length = 217 Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 82/158 (51%), Gaps = 13/158 (8%) Query: 49 LVMLDGDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVE 108 L M+D + G L + Q P + V++ + D ++ + +P+ + + Sbjct: 53 LAMIDINMPGMDGLAGLARLRQQAPTLPVIVVSADERHSTVEAAMSVGASGFIPKSFSRD 112 Query: 109 TFALAVNSAAMGMMFLP--------GDWRTTPEKDIKDLKS----LSARQREILTMLAAG 156 + AVN+ G ++LP G ++PE+ ++DL S L+ ++R +L + G Sbjct: 113 SMTEAVNAVLGGDIYLPPSLADRDTGVPGSSPEQ-LQDLASRLALLTKQERCVLDYIVGG 171 Query: 157 ESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAM 194 +SNK + LNI+ TVKAH+ ++ R+L+V +RTQA + Sbjct: 172 KSNKVVAIELNIAESTVKAHVSAILRKLKVSSRTQAVI 209 >UniRef50_B7A7I0 Two component transcriptional regulator, LuxR family n=2 Tax=Thermaceae RepID=B7A7I0_THEAQ Length = 192 Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 35/204 (17%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 M++++ D +F G+K L+ + V + + + L + L P+A V+LD Sbjct: 1 MRVLIADDHPLFRLGLKAGLEAQGLAVVAEAENGQEALDKALALKPDA-VLLD------- 52 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ P + L A +R + +I F L + ++ ALA A Sbjct: 53 ---------LRMPGMDGLTCARKLRERGYRGLIAF--LTTYQEPALLKEAALAGADAYFS 101 Query: 121 ------------MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNI 168 + + G+ R TP DL SL+ R+ E+L +LA G S KE+ +AL + Sbjct: 102 KELSAPELKRRLLRVMQGEERLTP----PDLPSLTPREGEVLALLAQGLSVKEMAKALGL 157 Query: 169 STGTVKAHLESLYRRLEVKNRTQA 192 S TVK HLE+LY +LE +NR +A Sbjct: 158 SPDTVKDHLENLYAKLEARNRVEA 181 >UniRef50_UPI0001C318AF two component transcriptional regulator, LuxR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C318AF Length = 208 Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 13/167 (7%) Query: 27 VSIQGASQADELWQKLESYPEALVMLDGDQDG-EFCYWLLQKTVVQFPEVKVLITATDCN 85 V+ + A++A EL ++ + + + GD+ G + C + + PE +VL+ + Sbjct: 43 VAARNATEALELTKRYRPHVALVDLFVGDESGADICESVRSTS----PETRVLLI-SGAG 97 Query: 86 KRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGDWRTTPEKDIKDLKSLSAR 145 + V +D A+AV +GM P P+ D + LS R Sbjct: 98 RISPHAAKAAGASGFVSKDWGAHDVAMAVRMVGLGMTMFP------PQAD-QPSTLLSER 150 Query: 146 QREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQA 192 ++E+LT++A G +N+EI L +S TVK H +LYR+L+ +NR +A Sbjct: 151 EQEVLTLIAGGSTNREIAEELYLSPHTVKEHTSALYRKLKARNRAEA 197 >UniRef50_C4ZEG3 Two-component response regulator (Extracellular proteinase response regulator) n=3 Tax=Bacteria RepID=C4ZEG3_EUBR3 Length = 214 Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 100/201 (49%), Gaps = 7/201 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + I++ D S+ G+K L+ I A ++ KL+++ +++LD + Sbjct: 3 INIMITDDHSMIREGLKNLLELDGDIKVIAEAENGEDCLDKLKTFRPDVLLLDINMPKMN 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +L+ + +VKVL+ +L + + + V +DS A+ + A G Sbjct: 63 GLEVLKALKDRKSKVKVLVLTVHNETEYLMKAVDIGINGYVLKDSESAELKKAIFTIADG 122 Query: 121 MMFL-----PGDWRTTPEKDIKDLK--SLSARQREILTMLAAGESNKEIGRALNISTGTV 173 ++ P +K+ +LK +L+ R+ E+L +A G+ N++I + + IS TV Sbjct: 123 ETYIQPSLIPALNSKMIQKNEDELKIDALTKREMEVLKEMAVGKFNRDIAKEMKISERTV 182 Query: 174 KAHLESLYRRLEVKNRTQAAM 194 K H+ S++++LEV +RTQAA+ Sbjct: 183 KNHISSIFKKLEVTDRTQAAV 203 >UniRef50_B9XH34 Two component transcriptional regulator, LuxR family n=3 Tax=bacterium Ellin514 RepID=B9XH34_9BACT Length = 226 Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 35/63 (55%), Positives = 44/63 (69%), Gaps = 2/63 (3%) Query: 131 TPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRT 190 TPEKD + LS R++EIL +LA G SNKEIG LNIS TV+ HL +Y +L V+ RT Sbjct: 156 TPEKD--ETGQLSGREQEILALLAEGLSNKEIGSKLNISFTTVRTHLMHIYEKLHVRCRT 213 Query: 191 QAA 193 +AA Sbjct: 214 EAA 216 >UniRef50_Q15YI7 Two component transcriptional regulator, LuxR family n=11 Tax=Gammaproteobacteria RepID=Q15YI7_PSEA6 Length = 219 Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 71/131 (54%), Gaps = 7/131 (5%) Query: 72 FPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGDWRTT 131 FPE+ V + + + + +VI+ L VP+ + A AV S G ++LP + + Sbjct: 74 FPELPVAVVSGLEDPMIITKVINLGALGFVPKTTGAAQIADAVTSMLEGDIWLPESYASD 133 Query: 132 P-EKD------IKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRL 184 E D ++ SL+ Q ++L + G NK+I L+I+T TVKAH+ +++++L Sbjct: 134 EVELDNEFAELADNVASLTPAQYKVLCYMRDGLLNKQIAYNLDIATATVKAHVTAIFKKL 193 Query: 185 EVKNRTQAAMM 195 + NRTQA ++ Sbjct: 194 HINNRTQAVLI 204 >UniRef50_A0YDX3 Two Component Transcriptional Regulator, LuxR family protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YDX3_9GAMM Length = 222 Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 23/213 (10%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEA---LVMLDGDQD 57 M++++ D + ++ L P V + D LE+ + + ++D Sbjct: 1 MRVLIIDDHQLIRAAVRNLLVPEFPAVE---CVEVDNGHSALEAVADGHFDVAIVDLFLP 57 Query: 58 GEFCYWLLQKTVVQFPEVKVLI-TATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS 116 E + L+++ P++ VL+ +ATD N +++ V A V + +ET AVN+ Sbjct: 58 NETAFVLVRQLCDMLPDLPVLVLSATDDNAH-MRQCFALGVSAFVNKGEAIETIVDAVNA 116 Query: 117 AAMGMMFLP-------------GDWRTTPEKDIKDLKS-LSARQREILTMLAAGESNKEI 162 G ++P GD P + ++ + S L+ RQ +IL ++A G SNK I Sbjct: 117 VLSGKKYVPEALSAGADLSLSVGD-NDLPNQSLEKVMSVLTDRQLDILRLVAKGHSNKGI 175 Query: 163 GRALNISTGTVKAHLESLYRRLEVKNRTQAAMM 195 R N+S TVK H+ ++ + L + NRTQ ++ Sbjct: 176 ARHSNLSENTVKVHVSAILKALGLSNRTQIGLL 208 >UniRef50_B9JKP6 Two-component response regulator protein n=2 Tax=Agrobacterium RepID=B9JKP6_AGRRK Length = 217 Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 11/132 (8%) Query: 73 PEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGDW---- 128 P+ K+++ + +L I + +D + E+ ++ G F D Sbjct: 76 PDTKIVMLTMHESIDYLSAAIKVGASGYLLKDVSRESLLRTIDIVLDGQAFFDADLMCKM 135 Query: 129 -----RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRR 183 R +P + + ++ L+ R+REIL L GE+NK I RAL+IS GTVK H+E + + Sbjct: 136 LARIDRESPAEMV--IERLTNREREILCSLTTGETNKGIARALSISPGTVKVHVERILSK 193 Query: 184 LEVKNRTQAAMM 195 L V +RTQAA++ Sbjct: 194 LGVNDRTQAAVL 205 >UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH Length = 211 Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 11/130 (8%) Query: 73 PEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGDWRTTP 132 P +KVLI + ++ EVI + +D E A++ G P R+T Sbjct: 76 PGIKVLILTIHDEEEYVYEVIRSGAEGYIQKDVKPEELKRAIDKVIKGDKVFP---RST- 131 Query: 133 EKDIKDLKS-------LSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLE 185 E +++++ + LS+R++E+L +LA G SNK+I + L IS TVK H+ ++ R+L Sbjct: 132 ENEVREVVNEKYEVCELSSREQEVLELLAQGMSNKQIAQELFISEKTVKNHVSNILRKLS 191 Query: 186 VKNRTQAAMM 195 V +RTQA ++ Sbjct: 192 VNDRTQAVIV 201 >UniRef50_A6F5J0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Marinobacter algicola DG893 RepID=A6F5J0_9ALTE Length = 220 Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 93/192 (48%), Gaps = 6/192 (3%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPE-ALVMLDGDQDGEF 60 ++++ D F+ G+ L+Q + + + L S PE +LV+LD GE Sbjct: 24 RVLIVDDHPFFLFGITAILEQENLAREVATVASVADAVDDLRSRPETSLVLLDLTLQGEA 83 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L + V V++ ++ ++ ++ + +P+ + + V + G Sbjct: 84 GLSLFSELEQIGLPVSVVVISSREDEASVRAARSAGAVGFLPKSAGRRSLVRMVQRVSNG 143 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 ++F P + P + + L+ RQ E+LT+LA G NK I +AL+++ TVK HL+++ Sbjct: 144 LLFYP----SLPFPSLSP-EHLTPRQLEVLTLLADGLPNKRICQALDLTEHTVKTHLKAI 198 Query: 181 YRRLEVKNRTQA 192 + L+V NRT+ Sbjct: 199 FTHLDVHNRTEC 210 >UniRef50_UPI0000E116E2 Response regulator, LuxR family (CheY, HTH domains) n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E116E2 Length = 212 Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 48/199 (24%), Positives = 94/199 (47%), Gaps = 10/199 (5%) Query: 7 DRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEA-LVMLDGDQDGEFCYWLL 65 D +F ++ +L + I A ++ +P+ +++LD G ++ L Sbjct: 8 DDHPLFREALQAALLPFFNDMEIIEADSLHNTISAIKKHPDIDVILLDLTMPGADHFYGL 67 Query: 66 QKTVVQFPEVKVL-ITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFL 124 + + + V+ ITATD N+ + +H +P+ T A A+ + G F+ Sbjct: 68 TAVLDKCANIPVVVITATD-NEESVNIAMHLGAKGFIPKSYTSRKMAHAIMNVLNGGTFI 126 Query: 125 PGDW-----RTTPE--KDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHL 177 P + T PE I+ +K L+ +Q ++ L G+ NKEI L ++ T+KAH+ Sbjct: 127 PDRYIDAISSTHPEMLTAIELVKELTPKQLLVIKCLKQGKKNKEIAGELCVTEATIKAHI 186 Query: 178 ESLYRRLEVKNRTQAAMML 196 +++++L V +RTQ ++ Sbjct: 187 SAIFKKLNVTSRTQIVLLF 205 >UniRef50_Q89GQ5 Two-component response regulator n=1 Tax=Bradyrhizobium japonicum RepID=Q89GQ5_BRAJA Length = 274 Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 14/107 (13%) Query: 99 AIVPRDSTVETFALAVNSAAMGMMFLPGDWRTTPEKDIKD----------LKSLSARQRE 148 +I+ RD+ E ++ A G LP +TP + I L +L+ R+R+ Sbjct: 147 SIILRDTDSEALVESLRHIANGHNVLP----STPSESIASREQGTNSESGLTTLTERERQ 202 Query: 149 ILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMM 195 I+ +++ G SNKEIGR LN + GT+K HL +++++LE+ NRT A + Sbjct: 203 IMRLVSEGLSNKEIGRRLNTTDGTIKVHLHNIFQKLEISNRTVLAAL 249 >UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales RepID=D2BDI1_STRRD Length = 227 Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 55/201 (27%), Positives = 96/201 (47%), Gaps = 12/201 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQG-ASQADELWQKLESYPEALVMLDGDQDGE 59 +++++ D + HG++ L+Q + G + G A +E + S +V++D G Sbjct: 19 IRVLLVDDHPLLRHGLRALLEQ-VGGAEVVGEAGDGEEAIALVLSLNPDVVVMDLVMPGV 77 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 + + + P++ VL+ + + + V + + F AV + A Sbjct: 78 TGIEATRTLIDRRPDLGVLVLTMSEDDASVFAALRAGARGYVLKGADGNDFIAAVRAVAR 137 Query: 120 G-MMFLPGDWR-------TTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTG 171 G ++ P R T PE L+ R+REIL +LA+G+SN EI R L +S Sbjct: 138 GEAVYGPAVARRIRRFLTTGPES--GPFPELTQREREILDLLASGKSNAEIARRLFLSQK 195 Query: 172 TVKAHLESLYRRLEVKNRTQA 192 TVK HL S++ +L+V +RTQA Sbjct: 196 TVKNHLTSIFAKLQVADRTQA 216 >UniRef50_Q3SFT3 Two Component Transcriptional Regulator, LuxR family n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SFT3_THIDA Length = 224 Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 49/208 (23%), Positives = 97/208 (46%), Gaps = 11/208 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEA-LVMLDGDQDGE 59 ++ ++ D + G++ L Q P V I A L+ + + + L ++D + G Sbjct: 11 LKTLLADDHPLMREGVRQVLSQLEPPVEIIDAHDYPSLFAQTALHADLDLAVVDLNMPGF 70 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 + + +FP+V +++ + + ++ V+ L +P+ ++ T A+ Sbjct: 71 VGVQGISQFRARFPDVPLVVLSASESSHDIRSVLEAGALGYIPKAASSATMLAALQQVLA 130 Query: 120 GMMFLP--------GDWRTTPEKDIKDLK--SLSARQREILTMLAAGESNKEIGRALNIS 169 G +++P R D L+ L+ARQ E+ +LA G +NK I +L +S Sbjct: 131 GDIYIPTCPPAVREDGPRGARTADFDALQHSGLTARQLEVARLLAQGCANKAIAGSLAMS 190 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMMLN 197 TVK H+ +++R L V NRT+A + + Sbjct: 191 ESTVKVHIAAIFRALSVTNRTEAVLAIQ 218 >UniRef50_B5JVB0 Two Component Transcriptional Regulator, LuxR family n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JVB0_9GAMM Length = 208 Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 10/201 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 M++++ D +F+ G+ + + + V + A +EL +L P L+++D G Sbjct: 1 MRVLLADDHQLFLDGITMLMADLVENVRVSTAGSLEELKSQL-VEPFDLLVMDLRMPGMK 59 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L V + PE V++ + ++ + + V +P+ + + G Sbjct: 60 GMRSLTGVVHRVPETPVVVISATESQADVNACMEAGVRGFIPKSTPAPEMLAILRRVLAG 119 Query: 121 MMFLPG--------DWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 ++ P W + + D LS RQ ++L +A G +NKEI LNIS T Sbjct: 120 ELYHPALEATAQHPSWESD-DVDRAAFSELSGRQMQVLAEMAKGSTNKEIAAVLNISEHT 178 Query: 173 VKAHLESLYRRLEVKNRTQAA 193 VK H+ L+ L+V +R + A Sbjct: 179 VKTHIAKLFSVLKVNSRVECA 199 >UniRef50_C1XS11 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XS11_9DEIN Length = 204 Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 3/197 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGD-QDGE 59 +++++ D I G+K L + A +E K + LV+LD DG Sbjct: 3 LRLLIVDDHPIVREGLKAFLGLYADLEVVGEADSGEEALSKSRALSPDLVLLDLQLSDGH 62 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 +L + + P KVLI + + L++ + + + + + +A Sbjct: 63 GLSFLPRFLSLPNPP-KVLILTSFLEEDRLRQALSLGASGYLVKHAGPVALLEGIRAAGR 121 Query: 120 GMMFL-PGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLE 178 G + L P R L SL+ ++RE+LT LA G SNK I +AL +S T+K H+ Sbjct: 122 GEVPLDPAAVRLLARPARNPLASLTPKEREVLTHLARGMSNKAIAQALGVSEKTIKTHVS 181 Query: 179 SLYRRLEVKNRTQAAMM 195 SL +L +K RTQAA++ Sbjct: 182 SLLAKLNLKGRTQAALL 198 >UniRef50_B5JNS6 Sigma-70, region 4 family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JNS6_9BACT Length = 220 Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/191 (23%), Positives = 101/191 (52%), Gaps = 5/191 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++V+ + +++F + ++QR I + +E +Q + + LV+LD G Sbjct: 12 LKVVVAEDETLFRDFLVRIIRQRFGFEIIGEVATGEEAYQLCDDHRPDLVILDLRLPGIT 71 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L ++ + + PE K+LI ++ + + + ++ V + + F A+ + A G Sbjct: 72 GQELAERLINEQPEAKILIISSVEDPKRIGSLLQMGVTGFLNKKEEFSVFEQAIEAVANG 131 Query: 121 MMFLPGDWRTTPEK-DIKD----LKSLSARQREILTMLAAGESNKEIGRALNISTGTVKA 175 +F+ +T + D+ D L++LS R+++I+ +A+G +NKEI + L +S TV++ Sbjct: 132 NIFVKASAQTQSDSPDVLDQKELLETLSDREKQIVVFVASGMTNKEIAQNLGLSIKTVES 191 Query: 176 HLESLYRRLEV 186 H ++ ++L++ Sbjct: 192 HRSNISKKLKI 202 >UniRef50_C6CZA5 Two component transcriptional regulator, LuxR family n=4 Tax=Firmicutes RepID=C6CZA5_PAESJ Length = 221 Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 51/209 (24%), Positives = 102/209 (48%), Gaps = 18/209 (8%) Query: 1 MQIVMFDRQSIFIHGMK--ISLQQRIPGVSIQGASQA--DELWQKLESYPEALVMLDGDQ 56 +++++ D + G++ + L+ + V+ G+ QA L L S ++++D Sbjct: 7 LKVMIVDDHDMVRTGLRTYLMLEPKFEVVAEAGSGQAAISMLEAGLPSGLPDVILMDLMM 66 Query: 57 DGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS 116 G ++ +V++P +K+++ + + I ++ V + + E A++ Sbjct: 67 PGMDGIETTRQLIVEYPNLKIIMLTSFLEDDKVYGAIEAGAVSYVLKTVSAEELIYALHG 126 Query: 117 AAMGMMFLPGD----------WRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRAL 166 A GM + D RT D + L+ R++E+L ++A G SNKEIG L Sbjct: 127 AVKGMPVMTADVSQALTRGLRQRTAQSGD----EELTEREKEVLLLIAEGRSNKEIGEEL 182 Query: 167 NISTGTVKAHLESLYRRLEVKNRTQAAMM 195 +IS TVK H+ +L + E+++RTQ A++ Sbjct: 183 HISVKTVKTHVSNLLMKCELEDRTQLAVL 211 >UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJD7_9MICO Length = 207 Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/203 (26%), Positives = 102/203 (50%), Gaps = 15/203 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQG-ASQADELWQKLESYPEALVMLDGDQ--- 56 +++ + D + G++ +L + PG+S+ G A E +++ +V++D Sbjct: 2 IRVYLVDDHQLVRAGVR-TLLESDPGLSVVGEARDGQEAVAGIDAAASDVVLMDLSMPVM 60 Query: 57 DGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS 116 DG + T P+ +VL+ + ++ ++EV+ + V +D+ AV++ Sbjct: 61 DGVEATRAILST---HPDTRVLVLTSFSDRERVKEVLAAGAIGYVLKDAEPADLLAAVHA 117 Query: 117 AAMGMMFLPGDWRTT----PEKDIKDLKS-LSARQREILTMLAAGESNKEIGRALNISTG 171 AA G + P D R P + LS R+ ++L ++A G +NK++ RAL I+ Sbjct: 118 AARGEV--PIDPRVAGALLPSAGGPSVADRLSPRETQVLRLVAQGLANKQVARALGITER 175 Query: 172 TVKAHLESLYRRLEVKNRTQAAM 194 TVKAHL ++R + V +RT AA+ Sbjct: 176 TVKAHLGRVFREIGVLDRTSAAL 198 >UniRef50_A0M543 Two-component system response regulator n=3 Tax=Flavobacteria RepID=A0M543_GRAFK Length = 212 Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 15/198 (7%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQG-ASQADELWQKLESYPEALVMLDGDQDGEF 60 ++++ D I + G+K LQ P + + G +L+ +LE +++++ D Sbjct: 3 RVLIADHHPIILEGVKCVLQNN-PALQVTGRVGSGTQLFNQLEKDAPDVLIVELDLPQIN 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +++ +FPEVK LI ++ + + I + + + ET A+ A G Sbjct: 62 GINAIRRIKQEFPEVKTLIFSSHPEEMYALSAIKAGAAGYISKHTDNETLEKAIYQVARG 121 Query: 121 MMFLPGDWRTTPEKD----------IKDLKSLSARQREILTMLAAGESNKEIGRALNIST 170 ++L R+ EK I K LS R+ E+L +L++G+ NK+I AL+I+ Sbjct: 122 GIYL---NRSITEKLNSGISRGKSLITKFKKLSTRETEVLNLLSSGKRNKDIAEALDINE 178 Query: 171 GTVKAHLESLYRRLEVKN 188 TV + L ++L+V N Sbjct: 179 KTVSTYKTRLLKKLKVDN 196 >UniRef50_B7XNB9 Transcriptional regulatory protein n=2 Tax=cellular organisms RepID=B7XNB9_ENTBH Length = 206 Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/195 (28%), Positives = 96/195 (49%), Gaps = 4/195 (2%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESY-PEALVMLDGDQDGEF 60 +IV+ D ++ GM L++ IP +I+ A +E+W LE + P A++ ++ G Sbjct: 4 RIVVADEHPLYREGMTGLLERLIPEATIKQAGNLEEVWILLERWQPVAMLFIEVYLPGLC 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L K + V++ +T + + V+ + ++ + E A+N G Sbjct: 64 SLKELAKLCGERGTTAVVVVSTVDDSVVITRVMEAGANGFIGKNISAEEVRNAINDIRNG 123 Query: 121 MMFLPGDWRTTP--EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLE 178 + + + +P E D + L++RQRE+ ++A G++NKEI L IS TV+ H+ Sbjct: 124 QVVVKYEPAESPSFESD-HAMGKLTSRQREVWHLIAQGKTNKEIAAELEISPYTVRIHVS 182 Query: 179 SLYRRLEVKNRTQAA 193 SL R L V NR AA Sbjct: 183 SLIRALNVPNRAVAA 197 >UniRef50_Q1D523 DNA-binding response regulator, LuxR family n=2 Tax=Cystobacterineae RepID=Q1D523_MYXXD Length = 246 Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 29/54 (53%), Positives = 39/54 (72%) Query: 139 LKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQA 192 LK LS R+REIL ++A G SN E R L++S T++ HLE +YR+LEV NR +A Sbjct: 181 LKPLSDREREILQLIAKGVSNSEAARLLDLSKATIRTHLEHIYRKLEVTNRVEA 234 >UniRef50_B8IGA6 Two component transcriptional regulator, LuxR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IGA6_METNO Length = 270 Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 30/57 (52%), Positives = 43/57 (75%) Query: 138 DLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAM 194 ++ LS R+R ILTMLA+G SNK I R L+++ TVK H++S+ R++ V NRTQAA+ Sbjct: 180 NMPHLSERERLILTMLASGSSNKVIARRLDVTEATVKVHVKSILRKIRVSNRTQAAI 236 >UniRef50_C6VZM4 Two component transcriptional regulator, LuxR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VZM4_DYAFD Length = 214 Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/200 (25%), Positives = 100/200 (50%), Gaps = 15/200 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGD---QD 57 ++ ++ D IF+ G++ +L + + S+ +++ KLE+ L++LD + +D Sbjct: 4 VRTILADDHEIFLDGLEKTLCEIEEIDIVAKVSRGNDVIYKLETISPDLLILDVNMPQKD 63 Query: 58 GEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSA 117 G +QK+ ++ K+L+ + + +++V++ ++ VP+D+ E AV S Sbjct: 64 GVEILSYIQKSSLK---AKILVLSYYLDYALIKKVLNMGIMGYVPKDAGKEELHAAVRSI 120 Query: 118 AMGMMFLPG---------DWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNI 168 G +LP + R P D + +L+ R+ +ILT +A S EI L + Sbjct: 121 MDGKPYLPDSVKEIIKTRESRPDPHDDFVSMYNLTKREVDILTEVAREFSTAEIADKLCL 180 Query: 169 STGTVKAHLESLYRRLEVKN 188 S TV+ + +S+ R+L KN Sbjct: 181 SEYTVETYRKSIIRKLAAKN 200 >UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8B3_9BACT Length = 212 Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/197 (24%), Positives = 99/197 (50%), Gaps = 4/197 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQG-ASQADELWQKLESYPEALVMLDGDQDGE 59 +++++ D + G+K L+ R V++ G A+ DE W+ +E + +LD G Sbjct: 4 IRVILADDHPLTRQGLKAYLE-REENVALVGEAADGDEAWKLIEELKPDVALLDIRMPGA 62 Query: 60 FCYWLLQKTVV-QFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAA 118 L ++ + P +++T+ D +++++ + V + ++ A+ + A Sbjct: 63 DGITLARRIKENKLPVAAIMLTSYD-SQQYVLASLKAGAKGFVLKTTSAGALMKAIQTVA 121 Query: 119 MGMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLE 178 G +FL + + + ++LS R+RE+L A G S+KE+ L IS TV+ HL Sbjct: 122 TGSLFLDSEVASVVGAQEELTEALSPREREVLLCAARGLSSKEVAAQLYISERTVQTHLA 181 Query: 179 SLYRRLEVKNRTQAAMM 195 S+Y +L N+T+A ++ Sbjct: 182 SVYDKLGAHNKTEAMLL 198 >UniRef50_B2A8K6 Two component transcriptional regulator, LuxR family n=9 Tax=Clostridia RepID=B2A8K6_NATTJ Length = 228 Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/214 (24%), Positives = 107/214 (50%), Gaps = 25/214 (11%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQ-ADELWQKLESYPEALVMLDGDQ--- 56 ++I++ D ++F G+K L +++ G +Q +E+ K++ ++++D + Sbjct: 10 IRILLADDHALFRQGLKKILDME-EDLAVCGEAQNGEEVVDKVKLLKPNIILMDINMPLL 68 Query: 57 DG-EFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVN 115 +G E ++ + + PE KV+ ++ +L E++ + +D T A+ Sbjct: 69 NGVEATKYVKEVS----PETKVIALTIHEDEEYLFEIVKEGAAGFLLKDVETPTLVQAIQ 124 Query: 116 SAAMGMMF--------LPGDWRTTPEKDIKDLKS-------LSARQREILTMLAAGESNK 160 G F L G++ + +++KS L+ R++EIL ++A G +NK Sbjct: 125 EVNKGNSFIHPTITHKLLGEFNRLAQNSPRNIKSDEAVQSELTGREKEILELMAQGYTNK 184 Query: 161 EIGRALNISTGTVKAHLESLYRRLEVKNRTQAAM 194 EI + L IS TVK H+ ++ R+++V +RTQA + Sbjct: 185 EISKELYISEKTVKNHVSNILRKMDVTDRTQAVI 218 >UniRef50_C6PMI5 Transcriptional regulator, LuxR family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PMI5_9CLOT Length = 242 Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 50/81 (61%) Query: 117 AAMGMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAH 176 +G++ + R +++ KDLK L+ R++EI + G SNKEIG L IS TVK H Sbjct: 159 CILGIICCIKEEREIVQEEKKDLKCLTNREKEIAGYICMGLSNKEIGEKLFISANTVKNH 218 Query: 177 LESLYRRLEVKNRTQAAMMLN 197 + ++Y+++ VKN+ + ++N Sbjct: 219 VYNIYKKVNVKNKVELINLIN 239 >UniRef50_O07528 Uncharacterized transcriptional regulatory protein yhcZ n=3 Tax=Bacillus RepID=YHCZ_BACSU Length = 214 Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 17/207 (8%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLD---GDQD 57 M+IV+ D + G++ + + A+ E + +E LV++D + D Sbjct: 1 MKIVIADDHHVVRKGLRFFFATQDDIEVVGEAATGLEALRVIEETKPDLVLMDLSMPEMD 60 Query: 58 GEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFA------ 111 G ++K + QFP+ +++ + ++ + + A +D+ E Sbjct: 61 G---IQAIKKAIQQFPDTNIIVLTSYSDQEHVIPALQAGAKAYQLKDTEPEELVKTRQVH 117 Query: 112 ---LAVNSAAMGMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNI 168 +++A M + + PEK+ L+ R++++LT +A G+SNKEI AL I Sbjct: 118 GGEYKLSTAIMPHVLTHMKNQHDPEKE--KYYQLTRREKDVLTEIANGKSNKEIAAALFI 175 Query: 169 STGTVKAHLESLYRRLEVKNRTQAAMM 195 S TVK H+ +L +LEV +RTQAA+ Sbjct: 176 SEKTVKTHVSNLLAKLEVADRTQAALF 202 >UniRef50_B8FX94 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FX94_DESHD Length = 212 Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 8/82 (9%) Query: 113 AVNSAAMGMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 AV +G + P R T LS R+ +ILT + G SN+EIG+AL IS T Sbjct: 128 AVTGKLLGQLVHPTQNRDTC--------GLSDRELQILTYVVKGSSNREIGQALFISEKT 179 Query: 173 VKAHLESLYRRLEVKNRTQAAM 194 VK HL S++R+L V++RTQAA+ Sbjct: 180 VKNHLSSIFRKLAVEDRTQAAL 201 >UniRef50_A5FIE9 Two component transcriptional regulator, LuxR family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FIE9_FLAJ1 Length = 213 Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/199 (26%), Positives = 95/199 (47%), Gaps = 15/199 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSI-QGASQADELWQKLESYPEALVMLD---GDQ 56 + +++ D ++F+ G+ ISL ++ P ++I A E + ++ ++LD + Sbjct: 4 INLLIADDHTMFLQGI-ISLLEQEPNITIIDKAVNGIEALEIIKKGVVDFIILDISMPEM 62 Query: 57 DGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS 116 DG +L+K Q P VK+LI +T N + +I V + +++ E A+N+ Sbjct: 63 DGIELSKILKK---QHPNVKILIVSTHSNVMIVSRLIRIGVNGYLLKNAAKEELLKAINT 119 Query: 117 AAMGMMFLPGDWR-------TTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIS 169 A G + + + EK + +L LS+R++EIL ++A + EI IS Sbjct: 120 IASGENYFAEELEEKHLSNSSKIEKQVSNLTELSSREKEILVLIAHEYNTAEIAEKTFIS 179 Query: 170 TGTVKAHLESLYRRLEVKN 188 TV H +L +L KN Sbjct: 180 LNTVNTHRRNLLSKLNAKN 198 >UniRef50_A3VVX9 DNA-binding response regulator, LuxR family protein n=1 Tax=Roseovarius sp. 217 RepID=A3VVX9_9RHOB Length = 202 Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 57/97 (58%) Query: 99 AIVPRDSTVETFALAVNSAAMGMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGES 158 +P+ ++ AV+ +G + P D+ + + + + L+ R+ ++L + G+S Sbjct: 99 GFLPKTLDPQSLVAAVHHMLLGETYTPLDFLESGDTEAEGKVHLTPRETDVLVGVLDGKS 158 Query: 159 NKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMM 195 NKEI R L+I TVK HL++L R+L KNRTQAAM+ Sbjct: 159 NKEIARDLDIQEVTVKLHLKTLSRKLGAKNRTQAAMI 195 >UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR family n=3 Tax=Clostridia RepID=Q2RJU9_MOOTA Length = 222 Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 53/204 (25%), Positives = 97/204 (47%), Gaps = 11/204 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQG-ASQADELWQKLESYPEALVMLDGDQDGE 59 + I++ D S+ G++ L+ P + + G A+ E + Y ++++D + G Sbjct: 7 ITILIADDHSLVREGIRKILELE-PDLQVVGEAATGQEAIEMTRRYQPQVIIMDINMPGL 65 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 + ++P++ +L ++ ++ E++ V V +D + E AV A Sbjct: 66 NGIEATKVIRQEWPQIAILALTIHDDEEYIIELLRSGVSGYVLKDISAEELVQAVYQVAR 125 Query: 120 GMMFL-PGD--------WRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIST 170 G + PG + P L+AR+REIL ++ G+SN+EI R L IS Sbjct: 126 GARVIHPGVAQKVIGCIQKQKPFTPAPVSIPLTAREREILIHVSLGKSNREIARELFISE 185 Query: 171 GTVKAHLESLYRRLEVKNRTQAAM 194 TVK HL ++ ++ V +RTQAA+ Sbjct: 186 KTVKNHLTHIFHKIGVSDRTQAAL 209 >UniRef50_B6INK4 Glycerol metabolism activator AgmR n=3 Tax=Rhodospirillaceae RepID=B6INK4_RHOCS Length = 214 Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 47/183 (25%), Positives = 89/183 (48%), Gaps = 23/183 (12%) Query: 35 ADELWQKLESYPEALVMLDGDQDGEFCYWLLQ-KTVVQFPEVK----------VLITATD 83 AD + + ++ E + + GDQD + LQ + FP ++ V+I + Sbjct: 25 ADANFFEAGTFDEVMELCQGDQDFDLILMDLQMPSWPGFPGIQQICEIQAGTPVVIVSAS 84 Query: 84 CNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLP-----GDWRTTP------ 132 ++ ++ + +P+ S+V+ A+N G +++P G+ +++ Sbjct: 85 ESQSDVRAALDAGASGYIPKSSSVKIMLSALNLVFSGGIYVPPAAIQGEGQSSGSAAQGG 144 Query: 133 -EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQ 191 + +L+ RQR++L L G+SNK+I L +S GTVK H+ ++ R L V+NRTQ Sbjct: 145 GHASGPGMPALTQRQRDVLRCLREGKSNKQIAYELGLSEGTVKIHVTAVMRSLGVRNRTQ 204 Query: 192 AAM 194 A + Sbjct: 205 AVI 207 >UniRef50_Q0ZKD3 Putative uncharacterized protein n=1 Tax=Corynebacterium sp. L2-79-05 RepID=Q0ZKD3_9CORY Length = 221 Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 12/176 (6%) Query: 32 ASQADELWQKLESYPEALVMLDGDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQE 91 A+ E +K++++ + + D G LQ+ + L T ++ E Sbjct: 39 AADGAEALRKIDAHRLDVALFDIQMPGMSGLDALQRLRSDGSALPCLFVTTFGEDDYIAE 98 Query: 92 VIHFNVLAIVPRDSTVETFALAVNS-AAMGMMFLPGDWR-----------TTPEKDIKDL 139 I + V + V++ A G F P R T ++ Sbjct: 99 AIRLDADGFVLKSGDPRQLIAGVHAVAGRGAFFSPSVARRLLDSGVSTTYTQYASAVERF 158 Query: 140 KSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMM 195 + L+AR+REIL L+ GE+N EI +AL+++ GTVK H+ ++ R+ E +NR +AA++ Sbjct: 159 ERLTAREREILIRLSQGETNAEIAKALHLAPGTVKVHVSAILRKTEARNRVEAALI 214 >UniRef50_C4RMY6 Two-component system response regulator n=5 Tax=Actinomycetales RepID=C4RMY6_9ACTO Length = 226 Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 16/183 (8%) Query: 26 GVSIQGASQADELWQKLESYPEALVMLD---GDQDGEFCYWLLQKTVVQFPEVKVLITAT 82 G+ A D+ Q ++ LV+LD D DG +++ + P V ++T Sbjct: 33 GIQTAAAVSGDQALQAVQELRPDLVLLDIRMPDVDGLTILQSIRR--LPAPPVVAMLTTF 90 Query: 83 DCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGDWRTT----------P 132 D ++ ++ + + +D+ E V + A G L T Sbjct: 91 DTDE-YVTAALRAGAAGFLLKDTDPEQLGHLVRTLAAGDTVLASKVTRTVVDGFLRSGGD 149 Query: 133 EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQA 192 E ++ ++ L+ R+RE+LT+LA G SN EIG + +S GTVK H+ ++ +L V NR +A Sbjct: 150 EHAVRAVQRLTEREREVLTLLADGLSNSEIGGRMFLSAGTVKDHVSAILTKLGVDNRVRA 209 Query: 193 AMM 195 A++ Sbjct: 210 ALL 212 >UniRef50_A4X066 Two component transcriptional regulator, LuxR family n=2 Tax=Rhodobacter sphaeroides ATCC 17025 RepID=A4X066_RHOS5 Length = 232 Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 61/119 (51%) Query: 77 VLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGDWRTTPEKDI 136 +++ A++ + E + + + + A+N G +LP R TP + Sbjct: 81 IVLFASNAGPSVVIEALEKGAAGYIDKTQGARSMVNALNFILAGETYLPAFMRLTPRRHS 140 Query: 137 KDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMM 195 D + L+ ++ E+L L G NKEI + + +S TVK H+ S+ +L VKNRTQAAM+ Sbjct: 141 SDERGLTPKELEVLGGLTIGLMNKEIAQNMGLSEVTVKMHVRSICAKLNVKNRTQAAMV 199 >UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04VJ6_LEPBJ Length = 221 Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 20/201 (9%) Query: 2 QIVMFDRQSIFIHGMK--ISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGE 59 +I + D +I G+K +S Q I G S A++ ++ LV+ D G Sbjct: 7 KIFLVDDHAILREGLKMILSGQFEICGES----GDAEKALDQIGKLNPDLVITDISMPGL 62 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 L++ Q+P ++ +I + N+ ++Q+++ + V +D A+ + Sbjct: 63 SGIDLVKNLRKQYPNIRTIILSRHDNREYVQKLLELGINGYVLKDDAGNDLLRAIEAVHK 122 Query: 120 GMMFL-PGD---------WRTTPEKDIKDLKS----LSARQREILTMLAAGESNKEIGRA 165 G +L PG P ++ +D K LS R+REIL ++A G SN+ IG+ Sbjct: 123 GETYLSPGITAHFLSGFVGSGKPGEENQDAKKAFSVLSDREREILKLVAEGNSNESIGKI 182 Query: 166 LNISTGTVKAHLESLYRRLEV 186 L IS TVK H ++ ++L + Sbjct: 183 LGISPATVKVHRANIMKKLNL 203 >UniRef50_B0C756 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C756_ACAM1 Length = 224 Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 107/209 (51%), Gaps = 16/209 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADE--LWQKLESYPEALVM-LDGDQ- 56 +++++ D + I +G+K ++ Q P + I G + + + + Q P+ ++M ++ Q Sbjct: 8 IRVLLVDDEDIVRYGLK-AIAQGTPEIEIVGEAGSGKAAIAQAKTLQPDVILMDINMPQM 66 Query: 57 DGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS 116 DG + + +Q P KVLI T +L E + + + +++ E F ++ Sbjct: 67 DGVTATQEISR--IQ-PHAKVLILTTHDEAEYLVEAMQQGAVGYLLKNTPPEDFIQSIQQ 123 Query: 117 AAMGMMFL-PGD-------WRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNI 168 A G + L PG +T I+ + ++ R++++L ++A G SN+EI L+I Sbjct: 124 AHKGYLQLGPGLGQKLCQLLKTPVRPQIEAFEGITPREQDVLKLVATGASNREISETLHI 183 Query: 169 STGTVKAHLESLYRRLEVKNRTQAAMMLN 197 + TVK H+ S+ R+ V++RTQ A+ N Sbjct: 184 TEKTVKNHVSSILSRVGVQSRTQLAIWAN 212 >UniRef50_C5V5K1 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K1_9PROT Length = 211 Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 9/172 (5%) Query: 25 PGVSIQG-ASQADELWQKLESYPEALVMLDGDQDGEFCYWLLQKTVVQFPEVKVLITATD 83 PG+ + G A +EL +KL++ LV+LD D GE L+++ +P++ +LI + Sbjct: 26 PGIEVVGEAVNGEELMRKLQATQVDLVLLDLDMPGENGANLIERIRRHYPDLLILILSAH 85 Query: 84 CNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSA-AMGMMFLP------GDWRTTPEKDI 136 + + + + +D + +T A++ A G P P+ + Sbjct: 86 DEIKVVSRAVQAGASGYICKDCSPKTLLEAIHKVVATGKYLSPLMAEELAYTSAIPQAN- 144 Query: 137 KDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKN 188 L LS+R++EI +L G SN +I R L IS TV AH +L +L +KN Sbjct: 145 NSLALLSSREQEIFRLLVEGLSNDDISRQLFISDRTVSAHKINLLNKLGLKN 196 >UniRef50_Q3Z6T8 DNA-binding response regulator, LuxR family n=4 Tax=Dehalococcoides RepID=Q3Z6T8_DEHE1 Length = 225 Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 19/212 (8%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D Q F G+ +L I + +++ES +V+L D Sbjct: 7 IRVMVIDEQPFFRAGVAQALSDN--NFEILPTDTHRDPMEQIESSLPDVVLLGSDLVAYS 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L ++ V FP KV+I + + N L E I +A + + ST + + A G Sbjct: 65 GLDLGRRIVRTFPNTKVIILSPNPNDTELFECIRTAAVACLKKSSTADELIETIRRANRG 124 Query: 121 MMFLPGDWRTTPE----------------KDIKD-LKSLSARQREILTMLAAGESNKEIG 163 + T+P KD + + L+ R+++ILT++A G +NK+I Sbjct: 125 EYPINESLMTSPNLAKQVLAQFQDVSLLGKDASNFVTPLTNRKKQILTLIANGNTNKQIA 184 Query: 164 RALNISTGTVKAHLESLYRRLEVKNRTQAAMM 195 L IS T+K H+ ++ R+L +R A ++ Sbjct: 185 NNLEISEQTIKNHVSAILRKLNANDRAHAVVV 216 >UniRef50_Q15UD9 Two component transcriptional regulator, LuxR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15UD9_PSEA6 Length = 213 Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 14/204 (6%) Query: 4 VMFDRQSIFIHGMKISLQQRIPGVSIQGAS--QADELWQKLESYPEALVMLDGDQDGEFC 61 ++ D +F MK ++Q + ++ AS Q +L KL S E L+ LD + G Sbjct: 6 IVADDHPLFRSAMKQAIQGVLGNDILESASYQQTIDLL-KLHSDVE-LIFLDLNMPGNDG 63 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 L FP+V V I + D + +++ + F +P+ + + A AV G Sbjct: 64 LTGLTMIRSHFPDVLVAIVSGDESPSMIRKAMDFGACGYIPKSTPLPVIADAVRELLEGE 123 Query: 122 MFLPGDWRTTPEKDIKD---------LKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 +LP + +K I+D L L+ Q ++L ++A G NK+I L +S T Sbjct: 124 QWLPNELVEQVQK-IEDSQEQAFAGKLAQLTPHQLKVLQLMADGLLNKQIAYELGVSEST 182 Query: 173 VKAHLESLYRRLEVKNRTQAAMML 196 +K H+ ++ +L NRTQA ++ Sbjct: 183 IKQHVSAVLHKLGFNNRTQAGVLF 206 >UniRef50_Q1AUM8 Two component transcriptional regulator, LuxR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AUM8_RUBXD Length = 208 Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 2/86 (2%) Query: 113 AVNSAAMGMMFLPGDW--RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIST 170 A+ AA G + +P D ++ DL L+ RQ+EIL ++A G++N +IGR L +S Sbjct: 116 ALTVAASGEVAVPRDLLKDLVAGREPVDLSGLTHRQQEILKLVAEGQTNAQIGRRLFLSE 175 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 TVK HL + Y+ L+V+NRT+AA ++ Sbjct: 176 STVKQHLRAAYKVLKVRNRTEAAKLI 201 >UniRef50_Q2W0D2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=4 Tax=Rhodospirillaceae RepID=Q2W0D2_MAGSA Length = 290 Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 11/203 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEA-LVMLDGDQDGE 59 M+I++ D +F G++ L Q +I A + ++S + +V+LD G Sbjct: 72 MKILIADDHELFRDGLRHVLDQFEGPPTIIEACDFPQAIAAVQSEKDIDIVLLDLTMPGM 131 Query: 60 FCYWLLQKTVVQFPE-VKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAA 118 L K P V +++ + ++R + + ++ +P+ S+ A+ Sbjct: 132 AWTEGLAKLKELLPSTVPLIVLSASDDRRHVLQAVNMGAAGFIPKTSSSRVMLSALKLVL 191 Query: 119 MGMMFLPGDWRTTPEKDI---------KDLKSLSARQREILTMLAAGESNKEIGRALNIS 169 G ++LP + SL+ RQRE+L +L G+SNKEI R L ++ Sbjct: 192 SGGVYLPPALLEQGGPGGDDGAPVAGESAIASLTPRQREVLALLGQGKSNKEIARVLELA 251 Query: 170 TGTVKAHLESLYRRLEVKNRTQA 192 GTVK H+ ++ + L V NRT+A Sbjct: 252 EGTVKLHVTAILKALNVNNRTRA 274 >UniRef50_B5WAQ1 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderia RepID=B5WAQ1_9BURK Length = 222 Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 51/193 (26%), Positives = 95/193 (49%), Gaps = 17/193 (8%) Query: 17 KISLQQRI---PGVSIQG-ASQADELWQKLE-SYPEALVMLDGDQDGEFCYWLLQKTVVQ 71 + SLQ + P + G A+ A++L L S P+ +V + G+ L + + Sbjct: 24 RASLQALVEANPALEFLGSAADAEKLVDCLAGSVPDVVVTDIAPEAGDALKTLFE---LS 80 Query: 72 FPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMM--------- 122 +++ + D + W+ + + + AI+PR++ ++ + A G+ Sbjct: 81 HASPSLVLLSDDPDNDWILDALPADAAAILPRNAMPAEIVASIEAVAAGLCVLTPDILAR 140 Query: 123 FLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYR 182 L G + + + ++L++R+ E+L MLA G NKEI R L+IS TVK HL +++ Sbjct: 141 LLAGTRQPRQKASGEPFEALTSREIEVLAMLADGLGNKEIARHLDISDNTVKFHLSAIFG 200 Query: 183 RLEVKNRTQAAMM 195 +L NRT+A M+ Sbjct: 201 KLGATNRTEAVML 213 >UniRef50_A3W9G2 Transcriptional regulator, LuxR family protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3W9G2_9SPHN Length = 141 Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 2/76 (2%) Query: 119 MGMMFLPGDWRTTPEKDIKDLKSLSARQRE--ILTMLAAGESNKEIGRALNISTGTVKAH 176 +GM PG T E++ K + SL +RE IL LA G SNKEI R+L +S TVK H Sbjct: 55 LGMKLTPGGKPTAFERNEKAISSLGLTRRECEILDHLAKGASNKEIARSLGVSPNTVKTH 114 Query: 177 LESLYRRLEVKNRTQA 192 + +LY +LEV R +A Sbjct: 115 IANLYMKLEVTGRGKA 130 >UniRef50_B8KRZ2 Two component transcriptional regulator, LuxR family n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KRZ2_9GAMM Length = 226 Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 41/163 (25%), Positives = 80/163 (49%), Gaps = 7/163 (4%) Query: 42 LESYPEALVMLDGDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIV 101 L P L+MLD G + +L ++ Q + ++I + + + ++ + A + Sbjct: 45 LSQKPVDLLMLDLHMPGAVGFSVLSWSLAQRQRLPIIIISANTHPETVRRALDHGAAAFL 104 Query: 102 PRDSTVETFALAVNSAAMGMMFL-PGDWRTTPEKDIKDL------KSLSARQREILTMLA 154 + + E + G L PG ++ + + L +++A+Q +++ML Sbjct: 105 SKSAEPEVIVSTIGRVIAGERGLHPGLETSSRGESLSGLDAAEAIATMTAQQFRVVSMLV 164 Query: 155 AGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLN 197 G+ NK+I L + TVKAH+ ++R+L V +RTQAA++LN Sbjct: 165 EGQLNKQIAYELGVKEATVKAHMTEIFRKLGVHSRTQAALVLN 207 >UniRef50_B9JNF6 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JNF6_AGRRK Length = 275 Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 26/59 (44%), Positives = 45/59 (76%) Query: 136 IKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAM 194 + +++LS R++ IL ++ GESNK+I R L I+ TVK H++++ R+++V+NRTQAA+ Sbjct: 202 VNGVRNLSPREKSILKLVMGGESNKQIARRLEITESTVKVHIKTILRKIDVRNRTQAAI 260 >UniRef50_B1ZKW0 Two component transcriptional regulator, LuxR family n=7 Tax=Alphaproteobacteria RepID=B1ZKW0_METPB Length = 263 Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 32/60 (53%), Positives = 43/60 (71%) Query: 135 DIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAM 194 D L SLS+R+ IL LA GESNK I R L+I+ TVK H++++ R++ VKNRTQAA+ Sbjct: 156 DGTSLSSLSSREVNILEGLALGESNKVIARNLDIAEATVKVHVKAILRKVRVKNRTQAAV 215 >UniRef50_C4KCK2 Two component transcriptional regulator, LuxR family n=3 Tax=Rhodocyclaceae RepID=C4KCK2_THASP Length = 208 Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 49/190 (25%), Positives = 91/190 (47%), Gaps = 14/190 (7%) Query: 19 SLQQRI----PGVSIQGASQADELWQKLESYPEA-LVMLDGDQDGEFCYWLLQKTVVQFP 73 ++ QRI P + +++ADE LE++ + L ++D G + LL ++P Sbjct: 16 AMAQRIGRLEPDLVCLESARADEALALLEAHDDVDLAIVDLMLPGASGFSLLGVLAKRYP 75 Query: 74 EVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGDWRTTPE 133 ++ ++ + + ++ + V + S+ E A AV G M P R +P Sbjct: 76 DLPAIVVSAMDDDAAVRRALAAGASGFVSKASSGEVLAQAVREVLEGGMPTP---RASPS 132 Query: 134 KDIKDLKSLSAR------QREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVK 187 + + R Q ++ +LA G SN+EI L ++ GTVK H+ ++YR L V Sbjct: 133 ATSARTRRSAERYGVTLAQARVMELLATGGSNREIASRLGLTEGTVKVHMTAIYRALGVS 192 Query: 188 NRTQAAMMLN 197 +R+QA ++L+ Sbjct: 193 SRSQALVLLS 202 >UniRef50_A4JJ97 Two component transcriptional regulator, LuxR family n=6 Tax=Proteobacteria RepID=A4JJ97_BURVG Length = 213 Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 15/204 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPE-ALVMLDGDQDGE 59 M+I++ D I G+ L+Q V++ A AD+ + L+ + ++LD G Sbjct: 1 MKILIVDDHPILRDGVAALLRQNGEDVTVAQAGNADDAMRMLDQSADFDAIVLDLKLPGM 60 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 + + P++++++ +T + ++ L VP+ + T A+ Sbjct: 61 NGLDAISAFAGKCPQLQIIVLSTSEDAADVRAAFARGALGYVPKSAGPHTVLSAIRMVLD 120 Query: 120 GMMFLP------------GDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALN 167 G ++P G R P + L+ RQ E+L +A G NK I LN Sbjct: 121 GERYVPPLMLDDSSSAAPGSPRPAPAT--RSAGPLTQRQIEVLRYVAEGVPNKVIADRLN 178 Query: 168 ISTGTVKAHLESLYRRLEVKNRTQ 191 +S TVKAH+ ++++ L V NRTQ Sbjct: 179 LSEKTVKAHVTAIFKALNVLNRTQ 202 >UniRef50_B4DBM9 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBM9_9BACT Length = 209 Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 26/206 (12%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESY----PEALVMLDGD-- 55 +I++ D I G+ SL P + I ++A+ +Q +E + P+ LV++D Sbjct: 8 RILIVDDHFIARKGLIGSLSAE-PDIEI--VAEANNGFQAVEMFVLHRPD-LVLMDVRLP 63 Query: 56 -QDGEFCYWLLQKTVVQFPEVKV-LITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALA 113 QDG ++ P+ ++ ++T +D + L I V+ +P+ E A Sbjct: 64 LQDGVQAARTIRN---DHPQARIAMLTVSDAEEDILG-AIDAGVVGYLPKSVEREQLLTA 119 Query: 114 VNSAAMGMMFLPGDWRTTPEKDIK----DLKSLSARQREILTMLAAGESNKEIGRALNIS 169 ++ A G + PE + K + SL+ R+ E+LT + G SNKEIG L I+ Sbjct: 120 IHRLAEGGEYF------APEIEAKLRSTNRVSLTKRETEVLTQIVKGRSNKEIGYDLGIA 173 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMM 195 TV+ HL L+++L V +RTQAAM+ Sbjct: 174 EPTVRLHLTHLFKKLHVMDRTQAAMV 199 >UniRef50_P29369 Glycerol metabolism activator n=32 Tax=Gammaproteobacteria RepID=AGMR_PSEAE Length = 221 Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 71/134 (52%), Gaps = 12/134 (8%) Query: 73 PEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGD----W 128 P + V+I + + +K+ + + I + + + + S A+ G ++LP D Sbjct: 75 PTIPVVIVSAEQDKQVVLQAITYGAVGFITKSSPRAQMTEAIEQILNGNVYLPSDVIRTQ 134 Query: 129 RTTPEKDIKD--------LKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 +++P + + L++L+ +Q +L + GESNK+I L+I+ TVKAH+ ++ Sbjct: 135 KSSPRRSGHEEHGISPELLQALTRKQLLVLERMTKGESNKQIAYNLDIAETTVKAHVSAI 194 Query: 181 YRRLEVKNRTQAAM 194 R+L+V NR QA + Sbjct: 195 LRKLKVHNRVQAIL 208 >UniRef50_B8IQC8 Two component transcriptional regulator, LuxR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IQC8_METNO Length = 287 Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 20/178 (11%) Query: 35 ADELWQKLESYPEALVMLDGDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIH 94 AD P A+V+L + E ++ ++P ++ + N+ + ++ Sbjct: 54 ADAARTGGTPNPPAIVILCAEPKVELSLDEVRAVRERYPHSVLICLCSTSNEDQIVPMLE 113 Query: 95 FNVLAIVPRDSTVETFALAVNSAAMGMMFLPGDWRTTPEKDIKD---------------- 138 AI+ + + V T AV A MG +P TP D+ Sbjct: 114 NGAAAILTQTTGVNTLIQAVELALMGHRVVP--CLPTPPTDMPTQETEEQAQAGSDPVLT 171 Query: 139 LKSLSARQRE--ILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAM 194 ++S RE I+ L GESN++I R L+I G VK H++++ R++ V+NRTQAA+ Sbjct: 172 MQSFRPSPREVMIIACLVRGESNRDIARQLSIPVGRVKGHVKAILRKMRVQNRTQAAI 229 >UniRef50_Q2RR45 Two component transcriptional regulator, LuxR family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RR45_RHORT Length = 226 Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 24/219 (10%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKL--ESYPEALVMLDGDQDG 58 M++++ D SI + +K LQ V+ + A + L +L E P +V++D G Sbjct: 1 MRVLLADDHSIIRNALKFILQDLEAEVTFEEAREYPSLEDRLAAEGPPLDMVVMDLQMPG 60 Query: 59 EFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAA 118 +++ V + + + + ++ V+ V A +P+ + + A Sbjct: 61 YEGLAQIRRIVERAAPTPIAVFSMMEAVEDMRAVLRQGVRAFIPKSTDEALIGTLLKLVA 120 Query: 119 MGMMFLPG------DWRTTPE-------------KDIKD---LKSLSARQREILTMLAAG 156 G ++P D R P +D D L L+ RQRE+L +++ G Sbjct: 121 GGGTYVPAQVSGISDCRFPPPLKVVLATDIRTIGEDFDDNPRLSDLTRRQREVLALMSQG 180 Query: 157 ESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMM 195 SN EIG L ++ TVK H+ + + L+ NRTQA +M Sbjct: 181 LSNLEIGNRLGLNLSTVKTHVTGILKALDAGNRTQAVLM 219 >UniRef50_B2IZX5 Two component transcriptional regulator, LuxR family n=2 Tax=Cyanobacteria RepID=B2IZX5_NOSP7 Length = 206 Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 51/177 (28%), Positives = 93/177 (52%), Gaps = 12/177 (6%) Query: 25 PGVSIQG-ASQADELWQKLESYPEALVMLDGDQDGEFCYW----LLQKTVVQFPEVKVLI 79 P +++ G AS DEL +++ +V++D + + W L+Q+ Q+P + I Sbjct: 21 PRLTVVGSASDLDELAREVGQLQPDVVLIDLSANLQQSVWEKLLLIQEQ--QYPLGTIAI 78 Query: 80 TATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGD---WRTTPEKDI 136 + + L+ + + I+P ST AV + A G++ L D + EK + Sbjct: 79 I-EELDSIDLETALRSGIRGILPSTSTELEIVAAVEAIAFGLVVLHPDAIELLSIREKVV 137 Query: 137 KD-LKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQA 192 + +++L+ R+ E+L ML +G NK + + L IS TVK HL S++++L V +RT+A Sbjct: 138 ANPVQTLTPREIEVLGMLGSGLGNKAMAKRLQISEHTVKFHLSSIFQKLSVSSRTEA 194 >UniRef50_A6YEH0 CmnR n=1 Tax=Saccharothrix mutabilis subsp. capreolus RepID=A6YEH0_STRCP Length = 237 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 10/130 (7%) Query: 76 KVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGDWRTT---- 131 +V++ D + L I V +P S E F A+ + A G +LP Sbjct: 85 RVVVATQDDSDELLVSAIAAGVSGYLPLGSPGEEFPRAIRAVAEGGAYLPAHVTKRVFES 144 Query: 132 ------PEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLE 185 P+ L SL+ R+ ++L + G SN+EI R +S TVK+H+ + +LE Sbjct: 145 FQIIPLPDPSAPALLSLTEREGQVLRAIGQGRSNREIAREFEVSETTVKSHVSRVLAKLE 204 Query: 186 VKNRTQAAMM 195 +++R QAA++ Sbjct: 205 LRDRVQAALL 214 >UniRef50_A1R238 Putative Transcriptional regulator, LuxR-family n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R238_ARTAT Length = 424 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 32/71 (45%), Positives = 49/71 (69%), Gaps = 1/71 (1%) Query: 122 MFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLY 181 + LP D +TP D+ + L+AR+ E+L +LAAG+ N+ I L IS TVK HL +L+ Sbjct: 345 VVLPLDPPSTPAGDVAEW-GLAARELEVLQLLAAGQRNRTIATDLGISENTVKFHLRNLF 403 Query: 182 RRLEVKNRTQA 192 R+L+V++RT+A Sbjct: 404 RKLDVRSRTEA 414 >UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7D2_9BACL Length = 227 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 48/206 (23%), Positives = 102/206 (49%), Gaps = 14/206 (6%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSI----QGASQADELWQK--LESYPEALVMLDG 54 +++++ D + G+K L Q PG + +A EL ++ E P+ ++++D Sbjct: 13 IKVMIVDDHDMVRMGLKTYLMQD-PGFEVIAEAGDGREAVELLERGLREGQPD-IILMDL 70 Query: 55 DQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAV 114 G ++ +FP++K++I + + + + ++ V + + E A+ Sbjct: 71 MMPGMNGAEATKEVRSRFPDMKIVILTSFLEDDLVVQAVEAGAVSYVLKTVSAEELIYAL 130 Query: 115 NSAAMGMMFLPGDWRTTPEKDIK------DLKSLSARQREILTMLAAGESNKEIGRALNI 168 A GM + G+ + ++ D ++ R++E+L ++A G+SNK+I L+I Sbjct: 131 QGAYRGMPVMTGEVAQALTRGLRQRTVQGDDSGMTEREKEVLLLIAEGKSNKDIAEELHI 190 Query: 169 STGTVKAHLESLYRRLEVKNRTQAAM 194 S TVK H+ +L + E+++RTQ A+ Sbjct: 191 SIKTVKTHVSNLLMKCELEDRTQLAI 216 >UniRef50_Q7NN43 Two-component response regulator n=2 Tax=Gloeobacter violaceus RepID=Q7NN43_GLOVI Length = 217 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 28/68 (41%), Positives = 46/68 (67%) Query: 128 WRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVK 187 + P + + +L+ R+RE+L +A G SN EIGR L+IS+GTV+ H+ ++ R+L Sbjct: 140 FAVAPSEPPANAAALTEREREVLGWIARGASNPEIGRQLHISSGTVRVHVHAILRKLGAT 199 Query: 188 NRTQAAMM 195 +RTQAA++ Sbjct: 200 DRTQAAVL 207 >UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30 Tax=Bacillales RepID=B7GL14_ANOFW Length = 260 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 50/213 (23%), Positives = 95/213 (44%), Gaps = 19/213 (8%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 +IV+ D +F G+K L + S DE +E Y +V++D + Sbjct: 38 RIVLIDDHKLFREGIKRILDFEQDFEVVAEGSDGDEALALVERYKPDVVIMDINMPHVNG 97 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 ++ + +P+ KV+I + ++ ++ + + + ++ + AV A G Sbjct: 98 VEATRQLIEAYPDTKVIILSIHDDESYVMHALQTGAMGYLLKEMDADALIEAVRVVAEGG 157 Query: 122 MFL------------------PGDWRTTPEKDI-KDLKSLSARQREILTMLAAGESNKEI 162 +L G + +D+ + L+ R+ E+L +LA G+SNK I Sbjct: 158 SYLHPKVTHNLVKEYRRLVAGEGGGKEKQNQDVCRPYHLLTRRECEVLQLLADGKSNKGI 217 Query: 163 GRALNISTGTVKAHLESLYRRLEVKNRTQAAMM 195 AL IS TVK H+ ++ ++L V +RTQA ++ Sbjct: 218 ADALYISEKTVKNHVSNILQKLNVNDRTQAVVV 250 >UniRef50_B8IJA2 Two component transcriptional regulator, LuxR family n=9 Tax=Rhizobiales RepID=B8IJA2_METNO Length = 245 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 16/133 (12%) Query: 72 FPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLP------ 125 FP VKV + + + + + V VP+ AV G +++P Sbjct: 99 FPWVKVAVVSGSSERHKILAALEVGVHGYVPKGLGSSELTRAVGMILEGQIYVPPSLAVL 158 Query: 126 -GDWRTTP-------EKDIKDLKS--LSARQREILTMLAAGESNKEIGRALNISTGTVKA 175 G R+T E ++ +S L+ RQR++L +L G+SNKEI R L + GTVK Sbjct: 159 DGRSRSTARPASEAAEGGLRGGRSVELTPRQRDVLALLVEGKSNKEIARQLQLGEGTVKV 218 Query: 176 HLESLYRRLEVKN 188 H+ +L R L V+N Sbjct: 219 HMAALLRSLGVQN 231 >UniRef50_C8WQM5 GAF modulated transcriptional regulator, LuxR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WQM5_ALIAD Length = 506 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 46/76 (60%) Query: 117 AAMGMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAH 176 A G M + +R I L +L+ R+REIL ++A G KEIGRAL+IS TV H Sbjct: 420 ARAGRMIVMQMYRQAGAAPITPLTTLTKREREILQLIADGVDTKEIGRALHISDYTVTEH 479 Query: 177 LESLYRRLEVKNRTQA 192 + S+ R+L KNRT+A Sbjct: 480 VSSILRKLGAKNRTEA 495 >UniRef50_B6IS42 Transcriptional regulator, LuxR family protein n=1 Tax=Rhodospirillum centenum SW RepID=B6IS42_RHOCS Length = 216 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 29/53 (54%), Positives = 39/53 (73%) Query: 142 LSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAM 194 L+ R+REIL+ L G SNK+I LN++ TVK H ++L R+L V+NRTQAAM Sbjct: 153 LTVREREILSCLLGGGSNKDIASRLNVAESTVKMHFKALLRKLRVQNRTQAAM 205 >UniRef50_C5BJQ2 Regulator in two-component regulatory system n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BJQ2_TERTT Length = 208 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 68/133 (51%), Gaps = 7/133 (5%) Query: 71 QFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGDWRT 130 +FP + V I + + + +P+ + + A+ S G ++P ++ Sbjct: 73 KFPSIPVAIISAVEEPNTISRAMGHGACGYIPKSCSPQKIQSAIQSMLEGNHWVPDEFTH 132 Query: 131 T------PEKDIK-DLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRR 183 T E+D+ + +L+ +Q +L +L G NK+IG + ++ TVKAH+ +++R+ Sbjct: 133 TLTPVANEERDLAAKIATLTPQQYRVLCLLREGWLNKQIGFEMGVTEATVKAHITAIFRK 192 Query: 184 LEVKNRTQAAMML 196 L + NRTQA +M+ Sbjct: 193 LGISNRTQAVIMM 205 >UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD Length = 217 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 51/206 (24%), Positives = 100/206 (48%), Gaps = 19/206 (9%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQG-ASQADELWQKLESYPEALVMLD---GDQ 56 ++IV+ D ++ G+K+ L P + + G AS +E +++ LV+LD Sbjct: 5 LRIVLADDHAVLRAGLKVLLNAE-PDLEVIGEASDGEEAIDRVDDLHPDLVLLDLTMPKL 63 Query: 57 DGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS 116 +G C +++ + + ++K+L+ ++ +L+ V+ V + + A+ + Sbjct: 64 NGVDC---IEELLKKHADLKILVLTMHDDEEYLKAVLQVGAKGYVLKKAADVELLSAIRT 120 Query: 117 AAMGMMFLPGD------WRT-----TPEKDIKDLKSLSARQREILTMLAAGESNKEIGRA 165 A G MF+ +R PEK+ K LK LS R+ E+L LA G +N++I Sbjct: 121 VARGEMFIYPTMAAEFVYRHLVSPREPEKESKKLKQLSERELEVLRNLALGHTNQDIADL 180 Query: 166 LNISTGTVKAHLESLYRRLEVKNRTQ 191 L++S TV+ + + +LE+ R + Sbjct: 181 LHVSVKTVETYKARVMEKLEMHKRAE 206 >UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QSJ5_9RHOB Length = 212 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 13/200 (6%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKL--ESYPEALVMLDGDQDG 58 +++++ D ++ G++ L ++P + + G + KL E P+ L+M D Sbjct: 5 IRVLLADDHALVRDGIRARLN-KVPEIEVVGEATNGREAVKLAHELRPDVLLM---DVSM 60 Query: 59 EFCYWLLQKTVVQ--FPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS 116 L V+ FPE+ VLI + N +++ V+ + +D + A++S Sbjct: 61 PVMNGLEAAAEVRKSFPEIAVLILSIYDNSEYVRGVVQAGARGYILKDISAPEMITAISS 120 Query: 117 AAMGMMFL-----PGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTG 171 A G + P T I+D L+ R+R++LT +A G NKE+ ++L IS Sbjct: 121 VASGGYYFSSAVGPTLVGTATSAPIEDPYGLTDRERQVLTAIAKGLPNKEVAKSLGISVR 180 Query: 172 TVKAHLESLYRRLEVKNRTQ 191 TV++H +L ++ KN Q Sbjct: 181 TVESHRLNLREKVGNKNAAQ 200 >UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococci RepID=Q9RU37_DEIRA Length = 225 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 106/207 (51%), Gaps = 23/207 (11%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQG-ASQADELWQKLESY-PEALVM--LDGDQ 56 +++++ D ++ G+++ L G+ + G A+ +E Q+ E PE +VM + Sbjct: 14 VRVLLVDDHAVVRQGLRLFLGLD-EGIEVVGEAANGEEALQEAERLRPEVVVMDLMMPVM 72 Query: 57 DGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS 116 DG L++ + P+ +V+ + + + I ++ + +D++ +T A A+++ Sbjct: 73 DGITATRELRR---RLPDTEVIALTSTLEENKVNGAIEAGAISYMLKDASSDTLADAIHA 129 Query: 117 AAMGMMFLPGDWRTTPE---KDIKDLKS------LSARQREILTMLAAGESNKEIGRALN 167 AA G + R PE + ++D +S L+ ++ +L +LA G+SNK+I Sbjct: 130 AARG------EVRLHPEAARRLVRDFRSPEMRESLTPKETAVLQLLARGQSNKDIAAEQG 183 Query: 168 ISTGTVKAHLESLYRRLEVKNRTQAAM 194 +S TVK H+ L +L + +RTQAA+ Sbjct: 184 VSEATVKTHVSRLLSKLGLDSRTQAAL 210 >UniRef50_C3KN90 Two component transcriptional regulator, LuxR family n=2 Tax=Rhizobiales RepID=C3KN90_RHISN Length = 204 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 48/164 (29%), Positives = 82/164 (50%), Gaps = 15/164 (9%) Query: 39 WQKLESYPEALVMLD---GDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHF 95 WQ+++ LV+LD DG +LL +P + V I + + +Q+ I F Sbjct: 36 WQEVD-----LVLLDLTMPGTDGFAGLFLLHS---HYPTLPVAIVSARQDAATIQKAITF 87 Query: 96 NVLAIVPRDSTVETFALAVNSAAMGMMFLP---GDWRTTPEKDIKD-LKSLSARQREILT 151 VP+ + A A+ + G ++ P G P+ + L SLS++Q ILT Sbjct: 88 GASGYVPKSLDLPEMARAIGAILEGEIWTPPRVGAETADPDAAMSARLASLSSQQLRILT 147 Query: 152 MLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMM 195 + G+ NK+I + I+ TVK H+ ++ ++L V +RTQAA++ Sbjct: 148 KIIEGKLNKQIAGEMEIAEQTVKVHVSAILKKLGVVSRTQAAVL 191 >UniRef50_B3JKG3 Putative uncharacterized protein n=2 Tax=Bacteroides RepID=B3JKG3_9BACE Length = 215 Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 50/204 (24%), Positives = 104/204 (50%), Gaps = 21/204 (10%) Query: 2 QIVMFDRQSIFIHGMK-ISLQQRIPGVSIQGASQADELWQKLESYPEALVMLD------- 53 +++ D Q+I G+K ++L+ SI+ A EL L SYP+++V++D Sbjct: 3 HLILADNQAITRLGVKYLALEAGRELSSIKEAVGLQELSMMLSSYPDSVVIIDYTLFDCT 62 Query: 54 GDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNV-LAIVPRDSTVETFAL 112 DQ W+L++ +FP+ ++ + ++ +++ ++ + +++ +DS V A Sbjct: 63 ADQ-----LWILKE---RFPQSVFVLFSDALSESFIRRMVLGGIQFSLLFKDSDVHEVAA 114 Query: 113 AVNSAAMGMMFL---PGDWRTTPEKD-IKDLKSLSARQREILTMLAAGESNKEIGRALNI 168 ++ A G ++ W E+D + D+ L+ ++E+L L G++ KEI + Sbjct: 115 CLDEAEQGRQYICMKAKSWLYEKERDAVSDMPQLTMTEKEVLRSLTLGKTTKEIAAERFL 174 Query: 169 STGTVKAHLESLYRRLEVKNRTQA 192 S TV H ++++R+L V N +A Sbjct: 175 SVYTVMTHRKNIFRKLNVNNAQEA 198 >UniRef50_A9AZR3 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AZR3_HERA2 Length = 213 Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 67/127 (52%), Gaps = 4/127 (3%) Query: 72 FPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGDWRTT 131 P ++++ + + +W+ + I + ++ LA+ + A G FL + + T Sbjct: 76 MPSSRIIVLTSFSDDQWVSKAIQAGASGYLLKNVLKAELFLAIRTVANGQPFLHAEAQRT 135 Query: 132 PEKDIKD----LKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVK 187 + L SL+ R+R +L + G SNKEI R+L+++ GTVK ++ ++ +L V Sbjct: 136 LMRQSTAPPSLLPSLTERERSVLDGIVGGLSNKEIARSLHLTEGTVKGYVSTILTKLAVA 195 Query: 188 NRTQAAM 194 +RTQAA+ Sbjct: 196 DRTQAAL 202 >UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=C6E2Z1_GEOSM Length = 216 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/201 (24%), Positives = 94/201 (46%), Gaps = 17/201 (8%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSI----QGASQADELWQKLESYPEALVMLDGDQ 56 +++++ D SI G++I L +R P +S+ +A EL L + +V++D Sbjct: 2 IKVMVVDDHSIVREGIRI-LLERFPDLSVVAEADNGRKASELAADLAPH---VVLMDMTM 57 Query: 57 DGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS 116 G Q+ + PEV+VLI + +KR++ + + +D AV Sbjct: 58 PGLNGIDATQRLLAACPEVRVLILSMHKDKRFVSQAFRAGARGYLLKDCASAELVQAVRQ 117 Query: 117 AAMGMMFLPG--------DWRTT-PEKDIKDLKSLSARQREILTMLAAGESNKEIGRALN 167 A G M++ D+ T PE + L+ R+RE+L ++A G + K LN Sbjct: 118 VACGEMYVCHGIIGVVVHDYVTRLPESLTQPEVPLTPREREVLQLIAEGNNAKNAAYQLN 177 Query: 168 ISTGTVKAHLESLYRRLEVKN 188 I+ TV H + + ++L++++ Sbjct: 178 INVKTVDTHRQQIMKKLKMRS 198 >UniRef50_Q1MYT3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Bermanella marisrubri RepID=Q1MYT3_9GAMM Length = 198 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/195 (24%), Positives = 86/195 (44%), Gaps = 13/195 (6%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEA-LVMLD---GDQD 57 +I++ D +++ G+++ +Q + + A+ + L ++P+ L ++D G+ Sbjct: 3 KILIIDDHQVYLDGLELIVQSHLEETFVLKATDYQTAHEILLAHPDIDLTLIDLSLGESS 62 Query: 58 GEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSA 117 G + L+ P + + D + + L + + S A++ Sbjct: 63 GLEVWKELKHIHGPIPVAILSASEEDVD---IARCKRLGALGFIKKSSDNAVLTHAISKM 119 Query: 118 AMGMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHL 177 G + P D P + L+ RQRE+L +LA G NK I R LN+S TVK HL Sbjct: 120 LDGEPYFPYDLSNIPNIE------LTPRQREVLQLLAQGLPNKAICRELNMSEATVKTHL 173 Query: 178 ESLYRRLEVKNRTQA 192 +++ L V RTQ Sbjct: 174 RTIFALLNVNTRTQC 188 >UniRef50_A4U0R2 DNA-binding response regulator, LuxR family n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U0R2_9PROT Length = 228 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 54/210 (25%), Positives = 84/210 (40%), Gaps = 18/210 (8%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPE-ALVMLDGDQDGE 59 MQI++ D + G+K L + I A+ E + P L++LD G Sbjct: 1 MQILVADDHKLVRDGLKPFLHELDASAEILDAANLGEALSVGATAPSLGLILLDLMMPGM 60 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 L+ QFP V V+I + + + + +P+ + A+ Sbjct: 61 DGLKGLESVRKQFPNVPVVIVSGFSTREHVVAAVQAGASGFIPKTVSGTAMVNALRLVLS 120 Query: 120 GMMFLPGD----------------WRTTPEKDIK-DLKSLSARQREILTMLAAGESNKEI 162 G +LP R T +I LS R+ EIL +L G +NKEI Sbjct: 121 GEKYLPSSSFFEDVTVHMPMMPLQQRPTRTGEIPAPFDKLSRRESEILALLVEGRTNKEI 180 Query: 163 GRALNISTGTVKAHLESLYRRLEVKNRTQA 192 AL + T+K HL ++YR++ NR QA Sbjct: 181 AIALELQEITIKVHLRNVYRKIGAANRAQA 210 >UniRef50_C6XJS4 Two component transcriptional regulator, LuxR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XJS4_HIRBI Length = 220 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 11/168 (6%) Query: 37 ELWQKLESYPEALVMLD---GDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVI 93 E + L+S LV+LD D G LQ Q P +V I ++ ++ + Sbjct: 50 EACECLKSSLPDLVLLDLNLKDTTGLESLITLQ---AQVPSQRVAIVTATEDREIIERAM 106 Query: 94 HFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGDWR----TTPEKDIKD-LKSLSARQRE 148 + +P+ + + A++ G + P +++ +P +I L SL+ QR Sbjct: 107 ALGAVGYIPKSLDMNSLKGAISDLLSGENWTPPEFQQAIEPSPASEIASRLASLTPAQRR 166 Query: 149 ILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMML 196 +L+ L +G NK+I + IS TVKAH+ +++R+L V +RTQA + L Sbjct: 167 VLSGLKSGLLNKQIAYEMGISEATVKAHMTAIFRKLGVASRTQALLSL 214 >UniRef50_Q2SC56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SC56_HAHCH Length = 223 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 54/203 (26%), Positives = 101/203 (49%), Gaps = 17/203 (8%) Query: 1 MQIVMFDRQSIFIHGMKISLQ-QRIP--GVSIQGASQADELWQKLESYPEALVMLDGD-Q 56 +++++ D + I G++++L Q++P V+ A L + +S+ L++LD Sbjct: 15 LRVLVIDDHQLVIDGLRVALTAQQVPIDLVNAFNCQAAQTLLETDQSFD--LILLDLSLP 72 Query: 57 DG---EFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALA 113 DG +F +L K + + V +L + D L + + + + S+ LA Sbjct: 73 DGRGFKFLRYLTCKRI--YIPVAILSASEDIEDVELS--LRSGAIGFISKSSSAMEINLA 128 Query: 114 VNSAAMGMMFLPGDW---RTTPEKDIK-DLKSLSARQREILTMLAAGESNKEIGRALNIS 169 + G ++P + TP +D + L S++ RQ E+L +LA G NK I L+++ Sbjct: 129 IRQILNGKQYVPNFYIHRNQTPVQDSQLRLDSITPRQMEVLQLLAKGLPNKRICSELSLT 188 Query: 170 TGTVKAHLESLYRRLEVKNRTQA 192 TVK+HL++L+ L V NRT+ Sbjct: 189 EDTVKSHLKALFMHLNVHNRTEC 211 >UniRef50_B7KH54 Two component transcriptional regulator, LuxR family n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KH54_CYAP7 Length = 228 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 15/204 (7%) Query: 4 VMFDRQSIFIHGMKISLQ-----QRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDG 58 ++ D +S+F +K L ++ I A A + + Y L++LD + D Sbjct: 10 MLVDDESLFRENLKTLLNLYSDSGKMDFTIISEADSATKAINLIHRYHPHLILLDLELDH 69 Query: 59 EFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAA 118 E +L+ V L+ + + + + + + + + V+ AVN+ Sbjct: 70 ESGLDILKYLQTHHSSVITLVLSAHQEENLIFQAMQAGAKGYIFKINLVQQLGEAVNTVM 129 Query: 119 MGMMFLPGDWRT----------TPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNI 168 ++LP + T P + L+ R++E+L L G SN++I + L I Sbjct: 130 NDKVYLPPEVATHFFHYFNTYCDPLSNSDKELDLTKREKEVLQYLIQGLSNEQIAKQLYI 189 Query: 169 STGTVKAHLESLYRRLEVKNRTQA 192 + TVKAHL +++ +L VKNRTQA Sbjct: 190 TVATVKAHLTAIFNKLGVKNRTQA 213 >UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmicutes RepID=VRAR_STAA1 Length = 209 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 89/171 (52%), Gaps = 9/171 (5%) Query: 30 QGASQADELWQKLESYPEALVM--LDGDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKR 87 +GAS + + + E P+ ++M L D DG ++K P++KVL+ + + Sbjct: 33 EGASGKEAIAKAHELKPDLILMDLLMEDMDGVEATTQIKK---DLPQIKVLMLTSFIEDK 89 Query: 88 WLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG-MMFLPG---DWRTTPEKDIKDLKSLS 143 + + V + + + ++ + A AV + G +F P R +K + + L+ Sbjct: 90 EVYRALDAGVDSYILKTTSAKDIADAVRKTSRGESVFEPEVLVKMRNRMKKRAELYEMLT 149 Query: 144 ARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAM 194 R+ EIL ++A G SN+EI A +I+ TVK H+ ++ +LEV++RTQA + Sbjct: 150 EREMEILLLIAKGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVI 200 >UniRef50_UPI0001BC30E6 two-component system, NarL family, response regulator DegU n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC30E6 Length = 218 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 7/128 (5%) Query: 75 VKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGDW------ 128 V +I + + N + + VI + +D VE AV S G ++ + Sbjct: 77 VGTIIISDNDNAKKMSYVIREGCDGFISKDCDVEILKRAVYSVYEGKKYIQPELEKFLNI 136 Query: 129 RTTPEKDIKD-LKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVK 187 T E D ++ +K+L+ R+ E+L +++ G NK+I L I+ TVK H+ S++R++ V Sbjct: 137 NVTQEDDPEERIKNLTKREIEVLLLISKGYVNKDISNELKITERTVKNHVSSIFRKINVN 196 Query: 188 NRTQAAMM 195 +RTQAA+ Sbjct: 197 DRTQAAVF 204 >UniRef50_C5SBA1 Two component transcriptional regulator, LuxR family n=3 Tax=Gammaproteobacteria RepID=C5SBA1_CHRVI Length = 238 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/207 (25%), Positives = 100/207 (48%), Gaps = 14/207 (6%) Query: 1 MQIVMFDRQSIFIHGMKISLQQR-IPGVSIQGASQADELWQKLESYPEALVMLDGDQDGE 59 M++++ D ++F G++ L++R I V+ G S L + E+ P+ +V+LD G Sbjct: 1 MRVLLIDDHALFRFGLQELLERRGIEVVAAVGESSTG-LERVAETRPD-VVLLDMRMPGL 58 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 LL++ + + + T +R + + + + +D + A+ Sbjct: 59 NGLELLRRLRAAHQSMPIAMLTTSAEERDVIDSLQSGAQGYLLKDMEPDALIAALGEIVQ 118 Query: 120 GMMFLPGDW----------RTTPEKDIKD-LKSLSARQREILTMLAAGESNKEIGRALNI 168 G + + +TP + L+ R++EIL LA G+SNK I R L I Sbjct: 119 GRTVVASELTGVLARAVRGESTPVPVVSGGAADLTPREQEILCHLAEGQSNKTIARELGI 178 Query: 169 STGTVKAHLESLYRRLEVKNRTQAAMM 195 S GTVK H++++ R+L+V +R +AA++ Sbjct: 179 SEGTVKLHVKAILRKLDVHSRVEAAVI 205 >UniRef50_B9XL75 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XL75_9BACT Length = 234 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 10/128 (7%) Query: 71 QFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGD--- 127 +FP VKVLI + NK ++ ++I V +D+ + A+ S G F D Sbjct: 89 EFPLVKVLILSIHTNKDYVLQIIKSGAQGYVLKDAPLTELVRAIESVHGGGAFFSPDISQ 148 Query: 128 -------WRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 T ++ + K L+ R+ E+L+M+A G+SNKE+ + + TV+ H E + Sbjct: 149 IMLDQYLAEATNGEESGNSKKLTNRETEVLSMIAEGQSNKEMASRMGVGVRTVETHRERV 208 Query: 181 YRRLEVKN 188 +L++ N Sbjct: 209 MNKLDIHN 216 >UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR family n=89 Tax=Bacteria RepID=C7Q6M6_CATAD Length = 225 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 20/208 (9%) Query: 1 MQIVMFDRQSIFIHGMK--ISLQQRIPGVSIQG-ASQADELWQKLESYPEALVMLD---G 54 +++++ D + G++ + LQ+ G+ + G A+ E ++ +++LD Sbjct: 8 IRVLIADDHRMVRQGLRTFLELQE---GIEVAGEAADGAECAERAAELEPDVILLDLVMP 64 Query: 55 DQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAV 114 DG LL++ +VL+ + ++R + I V +D A AV Sbjct: 65 GVDGVGAMELLREA---GSTARVLVVTSFTDRRMIIPAIRAGARGYVYKDVDPAALAAAV 121 Query: 115 NSAAMGMMFLPGDWRT----TPEKDIKD----LKSLSARQREILTMLAAGESNKEIGRAL 166 S G + L + T + D +L+AR+RE+L ++A G +N+EI RAL Sbjct: 122 RSVHAGHVLLEPEVATALLDSGSNGAADQGPQAPALTAREREVLVLIAQGRANREIARAL 181 Query: 167 NISTGTVKAHLESLYRRLEVKNRTQAAM 194 ++ TVK H+ ++ +L V +RTQAA+ Sbjct: 182 VLAEKTVKTHVSNILMKLGVADRTQAAL 209 >UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus RepID=A0R9S0_BACAH Length = 216 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 19/176 (10%) Query: 32 ASQADELWQKLESYPEALVMLDGDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQE 91 AS D + +K+E+ +++D + G+ + +P +VL+ + +L + Sbjct: 36 ASSGDGVLEKVEACRPDCILMDINLPGKNGIEATELVKKNYPNCRVLVFTMYEHDEYLMD 95 Query: 92 VIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGDWRTTPEKDIK-------------D 138 + + +DS+ E A+ M GD P K + Sbjct: 96 ALQAGADGYLLKDSSSEQVVAAIR------MLYRGDSVIHPRMTKKLITYHQQKMKVESN 149 Query: 139 LKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAM 194 L+ R++EIL L G SNKEI AL IS TVK H+ ++++L VK+R+QA + Sbjct: 150 ENELTEREKEILFELVKGLSNKEIAEALYISDKTVKIHINKIFKKLNVKSRSQAVI 205 >UniRef50_B4SJL0 Two component transcriptional regulator, LuxR family n=3 Tax=Stenotrophomonas RepID=B4SJL0_STRM5 Length = 224 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 49/204 (24%), Positives = 90/204 (44%), Gaps = 9/204 (4%) Query: 3 IVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCY 62 +++ D +F + + ++ + + I A D + + LE L++LD G Sbjct: 4 LLIADDHPLFRAALHRAAEEAVADLQISEADSLDSVLEVLEHQQIDLMLLDLHMPGNHGL 63 Query: 63 WLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMM 122 L P + ++I + + + ++ + +P+ S + A+ S G Sbjct: 64 AGLATIRALQPGLAIIIVSANEEPQVIRRAVDLGAAGYLPKSSGLNELQSALQSVLEGER 123 Query: 123 FLPGDWR-----TTPEKDIKDLK----SLSARQREILTMLAAGESNKEIGRALNISTGTV 173 ++P R P DL SLSA Q ++L+++A G NK+I L + TV Sbjct: 124 WIPALLREPVARVAPFSKDADLAARLASLSAHQYKVLSLVAEGLLNKQIADRLGVQLRTV 183 Query: 174 KAHLESLYRRLEVKNRTQAAMMLN 197 KAH+ + RL V+NR QA +L+ Sbjct: 184 KAHMTRIMERLGVRNRAQAIRVLH 207 >UniRef50_C4ZM15 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZM15_THASP Length = 226 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/197 (23%), Positives = 91/197 (46%), Gaps = 10/197 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVS-IQGASQADELWQKLESYPEALVMLDGDQDGE 59 M++++ D S+ G++ +L I GV+ I+ AS + + + LV++D D Sbjct: 4 MRVLLVDDHSLVRAGIR-ALLGSIAGVAGIEEASSGRQAVELAATMQPDLVLMDIAMDDM 62 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 + P +KV+I + + ++ + + +D+ V +A+ + Sbjct: 63 DGLAATRTIAAAHPHIKVVILSMHDTGDFFEQALRCGARGYLLKDAAVAELEMAIAAVMR 122 Query: 120 GMMFLP--------GDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTG 171 G ++L G+ P +D + L+ RQ EIL ++ +G KEI R L++S Sbjct: 123 GDVYLSPAVSRHLVGNMLARPPEDERAASVLTPRQTEILELIGSGLGTKEIARRLDLSVK 182 Query: 172 TVKAHLESLYRRLEVKN 188 TV+AH + RL V++ Sbjct: 183 TVEAHRAQIMERLGVRD 199 >UniRef50_A9EDS1 Probable transcription regulator protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9EDS1_9RHOB Length = 241 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 30/59 (50%), Positives = 39/59 (66%) Query: 137 KDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMM 195 D L+ RQ E+L LA G SNKEI R L +S TVK+H+ + R+L V NRTQAA++ Sbjct: 163 PDNPDLTRRQYEVLYALANGHSNKEIARDLELSEATVKSHVRQVMRKLHVDNRTQAALL 221 >UniRef50_C6P057 Two component transcriptional regulator, LuxR family n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P057_9PROT Length = 235 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 21/210 (10%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGA-SQADELWQKLESYPEALV--MLDGDQD 57 ++IV+ D QS+ G+ L R G ++ GA ++L ++ P+ LV + D Sbjct: 5 LKIVLVDDQSLCRRGLS-ELLSRCYGFNVLGAVGTIEDLRSLIKEQPDLLVVDLRMKPMD 63 Query: 58 GEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSA 117 G L+K P VL+T +D ++ L I V + +D E A+ Sbjct: 64 GLAMIEQLRKEGCDIP--AVLLTMSD-SEVDLGNAIRAGVRGYLLKDMAPEEVVDAIRRV 120 Query: 118 AMGMM------------FLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRA 165 A G + L GD K+ LK L+ R+REIL +L+ GESNK I Sbjct: 121 AAGELVVAPTMTVKMIDMLRGDQSGQEPKN--SLKLLTEREREILQLLSRGESNKAIALT 178 Query: 166 LNISTGTVKAHLESLYRRLEVKNRTQAAMM 195 L+IS TVK H+ + +L + +R +AA++ Sbjct: 179 LSISYDTVKQHVRHILNKLNLSSRVKAAVL 208 >UniRef50_UPI00017468E1 two-component response regulator n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017468E1 Length = 210 Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/147 (27%), Positives = 73/147 (49%), Gaps = 7/147 (4%) Query: 49 LVMLD---GDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDS 105 +V++D G+ +G C L + P +++L+ ++ + I L + + + Sbjct: 56 VVIMDLQLGEVNGITCTEQLGQA---HPGIRILVFSSFARDEDVYRAIRAGALGYLQKSA 112 Query: 106 TVETFALAVNSAAMGMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRA 165 E A+ + +G +LPGD + + + S R+RE+L +A G SNKEI Sbjct: 113 PREDLLKAIRTVGLGKRYLPGDIAQRLAERLGRPEP-SPREREVLAQMAKGRSNKEIASV 171 Query: 166 LNISTGTVKAHLESLYRRLEVKNRTQA 192 L +S TVK H+ ++ +L ++RTQA Sbjct: 172 LGLSEETVKRHVSNVLEKLGAQDRTQA 198 >UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B1ZVM0_OPITP Length = 219 Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 48/198 (24%), Positives = 95/198 (47%), Gaps = 11/198 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQG-ASQADELWQKLESYPEALVMLDGDQDGE 59 ++IV+ D ++ G++ +L +++PGV+I G A E + ++ + ++D G Sbjct: 5 LKIVLADDHALVRAGIR-TLLEKLPGVTIVGEAGDGRETVTLVHTFAPDIAIMDITMPGL 63 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 + + + P KVLI + + ++ + + + +D+ LA+N+ Sbjct: 64 NGFDATARIAREHPRTKVLILSMHTAEDYVLQALRAGATGYLLKDAATAELQLALNAVRK 123 Query: 120 GMMFL-PGDWRTT------PEKDIK--DLKSLSARQREILTMLAAGESNKEIGRALNIST 170 G +L P ++ E+D + K+L+ R REI+ ++A G S KEI LN+S Sbjct: 124 GETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIAFLLNLSV 183 Query: 171 GTVKAHLESLYRRLEVKN 188 T++ H L RL + + Sbjct: 184 KTIETHRMHLMARLGLHD 201 >UniRef50_Q2G8Z2 Two component transcriptional regulator, LuxR family n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G8Z2_NOVAD Length = 208 Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 8/170 (4%) Query: 33 SQADELWQKLESYPEALVMLDGDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEV 92 + +E ++++ A+V+LD + G L+ + + V++ + N R L V Sbjct: 33 ASGEETLDAIKTHDPAVVLLDINMPGMNGVQALEALRERGDKRPVVLLTAEINDRQLISV 92 Query: 93 IHFNVLAIVPRDSTVETFALAVNSAAMGMMFL-PG------DWRTTPEKDIKDLKSLSAR 145 + V IV +D E + G + P D P+ L L+ R Sbjct: 93 MRAGVDGIVSKDGAEEGLVEVLEKVHAGQKAIEPNFLQRALDLSLRPDSQ-GPLAKLNPR 151 Query: 146 QREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMM 195 +R+I ++A G N++IG L I GTVK +L ++Y++L + NRT+ A++ Sbjct: 152 ERKIAALVARGMRNRDIGAELGIGEGTVKVYLHTMYQKLGIDNRTELALL 201 >UniRef50_A6SW03 DNA-binding response regulator, LuxR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SW03_JANMA Length = 213 Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 48/199 (24%), Positives = 91/199 (45%), Gaps = 6/199 (3%) Query: 3 IVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPE-ALVMLDGDQDGEFC 61 +++ D ++F G+ ++L Q P + I + +E Q LE+ + M+D Sbjct: 4 VLLIDDHAMFREGLTLALTQADPTLQIHCVASGNEALQLLETETSISTAMMDYYLPDIGG 63 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 LLQ+ P +++L + + ++ + + + + +T A++S G Sbjct: 64 GALLQRLRQLRPGLRILALSASEDPDDVRHALASGAHGFIHKSADSKTLFAALSSVMQGR 123 Query: 122 MFLPGDWR-----TTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAH 176 +LP ++ D L L+ RQ E+L ++ G N EI L ++ TVKAH Sbjct: 124 GYLPPTFKLDTHDGGSNDDASLLSRLTPRQMEVLRLMCDGLRNGEIADQLGMTEKTVKAH 183 Query: 177 LESLYRRLEVKNRTQAAMM 195 + ++ L V NRTQA ++ Sbjct: 184 VSAVLSGLGVLNRTQATVV 202 >UniRef50_B5JPJ0 Sigma-70, region 4 family n=3 Tax=Verrucomicrobiales RepID=B5JPJ0_9BACT Length = 213 Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 30/63 (47%), Positives = 44/63 (69%) Query: 138 DLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLN 197 D+ SLS R+RE+L +A G +NKEI L+++ TV HL++ Y++L V+ RT+AAM L Sbjct: 150 DVDSLSNREREVLEFVAQGFTNKEIAAKLSVTPETVHWHLKNCYKKLHVRTRTEAAMKLR 209 Query: 198 ISS 200 SS Sbjct: 210 QSS 212 >UniRef50_A4FK96 Two-component system response regulator n=2 Tax=Actinomycetales RepID=A4FK96_SACEN Length = 230 Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 49/210 (23%), Positives = 100/210 (47%), Gaps = 20/210 (9%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLD---GDQD 57 +++V+ D + + G+++ L+Q + A +EL + + +V++D +D Sbjct: 13 IRLVLADDEVMLRRGLRVLLEQGGRIRVVAEAGNGEELLAAVRGHRPDVVLVDVQMPSKD 72 Query: 58 GEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSA 117 G L+ P + ++T D + ++ E + + +D+ AV Sbjct: 73 GLSALRDLRAMAA--PPIAAVLTTFDLDD-YVAEALRLGANGFLLKDADPAVLVRAVIDL 129 Query: 118 AMGMMFLPGDWRTTPE------------KDIKDLKSLSARQREILTMLAAGESNKEIGRA 165 A G L D R T +++ +++LSAR+R++L +LA G SN +IG Sbjct: 130 AAGGAVL--DPRITARLLPRFRNLGDSADEVRLVRTLSARERQVLFLLADGRSNADIGDR 187 Query: 166 LNISTGTVKAHLESLYRRLEVKNRTQAAMM 195 L ++ TVK+++ ++ +L +NR QAA++ Sbjct: 188 LGLTEATVKSYVSTVLGKLGAENRVQAALI 217 >UniRef50_A6W5Y9 Two component transcriptional regulator, LuxR family n=21 Tax=Actinomycetales RepID=A6W5Y9_KINRD Length = 204 Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 2/170 (1%) Query: 24 IPGVS-IQGASQADELWQKLESYPEALVMLDGDQDGEFCYWLLQKTVVQFPEVKVLITAT 82 +PGV+ + GA+ +E Q+ +LV++D G ++ + + PE VL+ Sbjct: 25 VPGVTRVVGAASGEEALQRWPVERPSLVIMDVRMPGIGGVEAARRLLARHPEANVLMATM 84 Query: 83 DCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGDWRTTPEKDIKDLKSL 142 + + + + +D + E A AV A + G RT + L Sbjct: 85 AEDGDGVARAVASGARGYLVKDVSREELATAVLQALQDVSRRRGGNRTRAVLTGR-APVL 143 Query: 143 SARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQA 192 + R++++L ++ G SN EIGR L +S TVK H L+R+LE +R QA Sbjct: 144 TEREQQVLVGMSRGRSNAEIGRELFLSEDTVKTHARRLFRKLEAADRAQA 193 >UniRef50_B6WQV4 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WQV4_9DELT Length = 222 Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 18/152 (11%) Query: 67 KTVVQF-PEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFL- 124 + ++Q PE ++LI ++R L E+I ++ V + A+++ G +FL Sbjct: 70 RAILQIRPETRILIYTGHEDQRHLLELIQLGIMGHVCKSDPPSVLLQAIDAVRQGEVFLS 129 Query: 125 ---PGDW----------RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTG 171 PG R +P + D+ LS R++EI +LA G S ++IG ALNIS Sbjct: 130 CADPGGCMAALMRQNRQRLSPAEGGPDIGMLSPREKEIFRLLADGYSVRQIGDALNISPK 189 Query: 172 TVKAHLESLYRRLE---VKNRTQAAMMLNISS 200 TV+ H S+ +L + T+ A+ L + S Sbjct: 190 TVETHKYSVLTKLRASSINELTKMAIRLGLVS 221 >UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacillus RepID=C3BET8_9BACI Length = 216 Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 20/208 (9%) Query: 4 VMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQ---DGEF 60 ++ D QS+ G+ + L R + A+ DE+ + E ++++D +G Sbjct: 1 MIVDDQSLIRDGLAMLLNLRSELEVVGTANDGDEVVRIAEQLQPEIILMDIRMPRINGVE 60 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L+++ +FP++KVL+ T + + E + + +D + A+ + G Sbjct: 61 GTRLIRE---RFPDMKVLMLTTFNDSELIFEALEQGASGYLLKDMETDAIVQAILTVHAG 117 Query: 121 MMFLPGDWRTTPEKDIKDLK--------------SLSARQREILTMLAAGESNKEIGRAL 166 LP D K++K K L+ R+ ++L + G +NKEI L Sbjct: 118 GAVLPQDITAQIVKELKRTKVVEISGQNQPKQVEQLTEREIDVLREIGLGLNNKEIAEKL 177 Query: 167 NISTGTVKAHLESLYRRLEVKNRTQAAM 194 I+ GTVK H+ +L +LE+++RTQAA+ Sbjct: 178 FITEGTVKNHVSNLISKLELRDRTQAAI 205 >UniRef50_Q4ZV39 Regulatory protein, LuxR:Response regulator receiver n=8 Tax=Pseudomonas RepID=Q4ZV39_PSEU2 Length = 222 Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 12/134 (8%) Query: 71 QFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDST----------VETFALAVNSAAMG 120 + P +KV+I D + L+ + + + +D++ V A+NSA Sbjct: 75 RMPGLKVVIFTMDDSTDHLEAAMSAGAVGYLLKDASRDEVIDGLQRVARGEEALNSAVSA 134 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 + R T + + +L+ R+R++L ++A G SN+EIG L I+TGT KAH+E + Sbjct: 135 RLLRRMTERNTSGAALPE--TLTPRERQVLGLVAGGFSNREIGEKLGITTGTAKAHVEKV 192 Query: 181 YRRLEVKNRTQAAM 194 +L +RTQAA+ Sbjct: 193 IGKLGASDRTQAAV 206 >UniRef50_A4XT64 Two component transcriptional regulator, LuxR family n=1 Tax=Pseudomonas mendocina ymp RepID=A4XT64_PSEMY Length = 203 Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 10/190 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + +++ D IF+ G+ ++L + I A A E Q+L+ L++LD E Sbjct: 12 LHLLLVDDHRIFLDGLALALAPLARDLQIDTAQNAAEAEQRLQQQTYDLILLDLRLPDEP 71 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 LLQ+ + + V I + + Q + L +P+ + + AV +G Sbjct: 72 GLELLQRWLARGESTPVAILSASDSAVDAQAALAAGALGFIPKSADGKALRQAVTRVLLG 131 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 LP T+P L+ RQ EIL +LA G NK I R L ++ TVK HL++L Sbjct: 132 ET-LPAPSSTSP---------LTPRQLEILQLLAEGLPNKAISRQLGLAEDTVKTHLKAL 181 Query: 181 YRRLEVKNRT 190 + V RT Sbjct: 182 FETFAVHTRT 191 >UniRef50_A5PER3 Two component system response regulator n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PER3_9SPHN Length = 231 Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 12/133 (9%) Query: 71 QFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFL------ 124 + P K+ + + E + V+ + + + E AV+ A G +L Sbjct: 74 RHPGTKLCVLVDVATREVALEYLASGVMGCMAKSRSAEEIVEAVDVIADGRPYLCKLTIE 133 Query: 125 -PGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRR 183 D TP + L+ RQR+++ ++A G+SNKEI R L I GTVK H+ + YR Sbjct: 134 QSADAPRTPP-----IGKLTRRQRKVMAVMAMGKSNKEIARELGICEGTVKVHVNAAYRA 188 Query: 184 LEVKNRTQAAMML 196 L V NR A L Sbjct: 189 LGVHNRVAAVRAL 201 >UniRef50_A3JWJ3 Two component transcriptional regulator, LuxR family protein n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JWJ3_9RHOB Length = 232 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 12/202 (5%) Query: 3 IVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYP-EALVMLD---GDQDG 58 +++ D +F +K++L I +L + P +L++LD D G Sbjct: 21 VLIIDDHPLFCDALKLTLGSIANFNKIVAVDNLQAAISELSTSPLPSLILLDLNLPDASG 80 Query: 59 EFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAA 118 L++ P ++I ++ + ++ I VP+ S F A++ Sbjct: 81 LNGLLKLKRVADNCP---IIIVSSMTDTALIEGAITAGASGYVPKHSHRSVFKQAIDMIK 137 Query: 119 MGMMFLPGDWRTTPEKDIKD-----LKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 G F P + ++D L SL+ +Q IL ++ G+ NK+I L I+ TV Sbjct: 138 EGGQFKPHGFTENVSTTVQDTVISRLASLTNQQARILELICEGKLNKQIAFELTIAETTV 197 Query: 174 KAHLESLYRRLEVKNRTQAAMM 195 KAH+ ++ R+L+V +RTQA ++ Sbjct: 198 KAHVTAIMRKLQVHSRTQAVLV 219 >UniRef50_C6PXX3 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridium carboxidivorans P7 RepID=C6PXX3_9CLOT Length = 215 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 50/203 (24%), Positives = 97/203 (47%), Gaps = 8/203 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQ--GASQADELWQKLESYPEALVMLDGDQDG 58 M+I++ S+ G+ ++L + + IQ G + + ++ ++S +++LD ++D Sbjct: 1 MKIIIISNYSVIREGI-VTLISKFDNLFIQFVGETIKESMFM-IKSNMADIILLDLNKDN 58 Query: 59 EFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAA 118 E L+ + + ++KV+I N + + + V V S E A+ Sbjct: 59 EDELHLISELISSGKDIKVIIVDFYENNEFFVKALKSGVQGYVLGKSNEEEILYAIERVY 118 Query: 119 MGMMFLPG---DWRTTPEKDIKD-LKSLSARQREILTMLAAGESNKEIGRALNISTGTVK 174 G + D + D+ + L+ L+ R+REIL +A G SN +I I+ TVK Sbjct: 119 EGKKYFDSYFVDSIINKDTDLPNKLELLTNREREILIEVAKGLSNPKISEKFFITENTVK 178 Query: 175 AHLESLYRRLEVKNRTQAAMMLN 197 H+ + +L +K+RT+AA+ N Sbjct: 179 KHINHILNKLNIKDRTEAALYWN 201 >UniRef50_C5EKG9 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EKG9_9FIRM Length = 268 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/94 (37%), Positives = 56/94 (59%), Gaps = 10/94 (10%) Query: 116 SAAMGMMFLPGDWRTTPEKDIKDLK--SLSARQREILTMLAAGESNKEIGRALNISTGTV 173 SA+ M F G + E D +K L+ R+ EI+ ++ +G SN++IG L IS TV Sbjct: 168 SASFSMRFPNGLKKNDKETDKSRMKRYGLTEREEEIMELIISGISNQQIGEKLFISENTV 227 Query: 174 KAHLESLYRRLEVKNRT--------QAAMMLNIS 199 K H+ +LYR+L+V NR+ QA+M+++I+ Sbjct: 228 KKHINNLYRKLDVVNRSQLMTNYYNQASMLVDIN 261 >UniRef50_C6WXD7 Transcriptional regulator, LuxR family n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WXD7_METML Length = 243 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 49/79 (62%) Query: 116 SAAMGMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKA 175 S +G+ + +KD+ ++ L+ R+RE+ +L +G SN+E+ L IS GTVK Sbjct: 156 SGILGLALKQASSMSAEDKDLTVIEHLTPREREVFALLPSGLSNRELATKLGISAGTVKI 215 Query: 176 HLESLYRRLEVKNRTQAAM 194 H+E + +L +++RTQAA+ Sbjct: 216 HVERVLSKLNLRDRTQAAV 234 >UniRef50_C6W2Z0 Two component transcriptional regulator, LuxR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W2Z0_DYAFD Length = 205 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 3/190 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQG-ASQADELWQKLESYPEALVMLDGDQDGE 59 ++I++ D + + G+K SL GV + G A+ A E L+ + LD + Sbjct: 3 VRILIVDDHPLVLEGLK-SLLADAEGVQVVGTATNAIEAIAFLKGNEVDIAFLDINLPDI 61 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 L +K QFPEVK L +T + ++ +I + + S E A+ Sbjct: 62 SGIDLCKKVKDQFPEVKTLALSTFNERAYVSRMIQNGASGYLIKSSGKEDILEAIAQVQA 121 Query: 120 GMMFLPGDW-RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLE 178 G F+ + + TP K + L+ R++E+L ++A G +N +I L IS TV +H + Sbjct: 122 GGYFMNVQFDQVTPATAPKTVPFLTRREKEVLVLIAEGLTNPQIAEQLFISVTTVNSHRQ 181 Query: 179 SLYRRLEVKN 188 +L + EV N Sbjct: 182 NLLIKFEVSN 191 >UniRef50_Q6WZ94 Transcriptional regulator n=1 Tax=Streptomyces vinaceus RepID=Q6WZ94_STRVI Length = 236 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 10/118 (8%) Query: 89 LQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPG--------DWRTTPEKDIK--D 138 L + V VP S E F A+ + A G FLP ++ P + + + Sbjct: 105 LSAALAAGVHGYVPLSSPREDFDAAIQAVAAGGGFLPTHVTRRLVRNFHLVPRRTDRPAE 164 Query: 139 LKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMML 196 L+ LS R++++L ++ G SN+EI R L +S TVK+H+ + +LE+++R AA ++ Sbjct: 165 LELLSEREQQVLLLVGDGRSNREIARTLRVSEATVKSHVSRVLAKLELRDRVHAAQLV 222 >UniRef50_C1DE28 Transcriptional regulatory protein AcoK, LuxR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DE28_AZOVD Length = 900 Score = 60.5 bits (145), Expect = 4e-08, Method: Composition-based stats. Identities = 29/52 (55%), Positives = 41/52 (78%) Query: 141 SLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQA 192 SLS R+ + L ++AAG+SNKEI R L+IS TVK HL++LY +L+V +RT+A Sbjct: 838 SLSERESQTLRLVAAGQSNKEIARTLDISVETVKWHLKNLYGKLQVTSRTRA 889 >UniRef50_C8WSR5 Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSR5_ALIAD Length = 231 Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 23/210 (10%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGAS----QADELWQKLESYPEALVMLDGDQ 56 +++++ D +F G+ +++ + PG+ + G + +A E +Q L+ P+ ++ D Sbjct: 10 IKVLVVDDHELFRRGV-VTVLRSTPGIYVVGEAGNGREAIECFQTLQ--PDVTLL---DI 63 Query: 57 DGEFCYWL--LQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAV 114 C L +K P K+L+ + L E + V + + E V Sbjct: 64 HMPVCNGLETARKMREANPNTKILMLTVSETEEMLFEAVKSGASGYVLKSVSPERLIECV 123 Query: 115 NSAAMGMMFLP--------GDWRTTPEKDIKDLKS---LSARQREILTMLAAGESNKEIG 163 G +P ++ T E + +S L+ R+RE+L L+AG SNKEI Sbjct: 124 RQVYEGEPVVPSSLAMKMIAEFSRTAETRMPSSESVTELTEREREVLQYLSAGASNKEIA 183 Query: 164 RALNISTGTVKAHLESLYRRLEVKNRTQAA 193 RAL IS TV+ H+ + +L + NR QAA Sbjct: 184 RALFISENTVRNHVRHILDKLHLSNRAQAA 213 >UniRef50_B6IT53 Nitrate/nitrite response regulator protein NarL n=1 Tax=Rhodospirillum centenum SW RepID=B6IT53_RHOCS Length = 228 Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 17/203 (8%) Query: 5 MFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCYWL 64 + D +F G+K L + + + ++ + + + L++LD GE Sbjct: 8 LIDANKLFREGLKRLLDESPFKIVAEASNVREGVTVADQGLKPDLILLDLVNGGEEEAEA 67 Query: 65 LQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFL 124 +++ P ++++ TD R L + + +D + + ++ MG Sbjct: 68 MRRLRQALPNSRMVVLTTDLCTRRLSNALEAGADGYLMKDLSSDALTQSLRLVMMGEKVF 127 Query: 125 P-------------GDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTG 171 P G+ P K LS R+ +IL L G+SNK I LNI+ Sbjct: 128 PTHLAALLISGRVNGNGLEMPVSR----KGLSQREIQILRCLLNGDSNKMIANHLNITEA 183 Query: 172 TVKAHLESLYRRLEVKNRTQAAM 194 TVK HL+SL R++ NRTQAA+ Sbjct: 184 TVKVHLKSLLRKINASNRTQAAI 206 >UniRef50_D1CEU2 Transcriptional regulator, LuxR family n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CEU2_THET1 Length = 217 Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 26/54 (48%), Positives = 41/54 (75%) Query: 139 LKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQA 192 L+ LS R+ EIL+++A+G +N EI R L ++ GTVK+H+ ++YR+L KNR +A Sbjct: 153 LEPLSERELEILSLMASGHTNSEIARELYVAVGTVKSHVNNIYRKLGAKNRVEA 206 >UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=Bacteria RepID=B4VFW8_9ACTO Length = 216 Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 50/206 (24%), Positives = 94/206 (45%), Gaps = 18/206 (8%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G++ L+ + + AS +E + E ++++D G Sbjct: 8 VRVLLVDDHQVVRRGLRTFLEVQEDIEVVGEASDGEEGIARAEELRPDVILMDIKMPGTD 67 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L++ +VLI + +R + + V +D + A A+ S G Sbjct: 68 GIEALRRLRELANPARVLIVTSFTEQRTVVPALRAGAAGYVYKDIDPDALAGAIRSVHAG 127 Query: 121 MMFLPGDWRTTPEKDIKDLK------------SLSARQREILTMLAAGESNKEIGRALNI 168 + L PE + L +L+ R+RE+L+ +A G SN+EI RAL + Sbjct: 128 HVLL------QPEVAVALLTQDDQGPSSSRGGALTDREREVLSHIADGRSNREIARALVL 181 Query: 169 STGTVKAHLESLYRRLEVKNRTQAAM 194 S TVK H+ ++ +L+V +RTQAA+ Sbjct: 182 SEKTVKTHVSNILMKLDVADRTQAAL 207 >UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=Thermomicrobia (class) RepID=B9L2G4_THERP Length = 246 Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 51/204 (25%), Positives = 102/204 (50%), Gaps = 12/204 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQG--ASQADELWQKLESYPEALVMLDGDQDG 58 +++++ D +F G++ L + P + + G A+ D L E P+ +V++D + G Sbjct: 28 IRVLIVDDHDLFREGLR-QLIETDPAIEVVGEAANGQDALKMVAELQPD-VVLMDINMPG 85 Query: 59 EFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAA 118 + V Q+ V VL+ ++ ++ I + + ++S E A++ AA Sbjct: 86 MDGIRATEAIVQQYRHVHVLMLTMYDDEEYVLHAIRAGARSYLVKNSKPEELLRAIHVAA 145 Query: 119 MGMMFLPGDWRTTPEKDIKDL--------KSLSARQREILTMLAAGESNKEIGRALNIST 170 G + D ++ + L + LS R+ +L +LA G +N++I ALN++ Sbjct: 146 EGGATIDPDLAPILMREYQRLLTKAPTRGQDLSDRELTMLRLLAQGYNNRQIADALNLAE 205 Query: 171 GTVKAHLESLYRRLEVKNRTQAAM 194 TVK +L +L+++L V++RTQA + Sbjct: 206 STVKNNLSALFQKLGVRDRTQAVI 229 >UniRef50_B1ZY58 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=B1ZY58_OPITP Length = 223 Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 89/180 (49%), Gaps = 6/180 (3%) Query: 18 ISLQQRIPGVSIQG-ASQADELWQKLESYPEALVMLDGDQDGEFCYWLLQKTVVQFPEVK 76 ++L + PG+ + AS +E + + +V++D G + + PE + Sbjct: 36 VALIRSQPGMDVVAEASDGEEAIEIYDDLQPDVVLMDLRMPGMGGVEAILAIRKKAPEAR 95 Query: 77 VLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGDWRTTPEK-- 134 V++ +T + + + + +D +E A V + G LP R+ E+ Sbjct: 96 VIVLSTYDWDEDIHRALQSGAKSYLLKDMPIEEIASTVRAVYAGDTSLP---RSVAERLT 152 Query: 135 DIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAM 194 + + L+ R+R++L L G SNKEI +L IS TVK+HL++L+ +L V++RT AA+ Sbjct: 153 ERAQREQLTERERDVLESLIKGRSNKEIASSLCISEDTVKSHLKTLFAKLRVRDRTGAAI 212 >UniRef50_Q1AST2 Two component transcriptional regulator, LuxR family n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AST2_RUBXD Length = 232 Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 30/212 (14%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGAS----QADELWQKLESYPEALVMLDGDQ 56 +++++ D + G ++ L+Q P + G + +A EL ++L P+ +VM D Sbjct: 11 VRLIVVDDHDLIRAGFRLVLEQE-PDFEVVGEASSGREAIELCRRLR--PDVVVM-DLAM 66 Query: 57 DGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS 116 G ++ + P+V VL+ + ++ E + V + S + A+ Sbjct: 67 PGVDGLEATRRIKEEHPQVAVLVVTALEDPEYMLEALKAGAAGYVLKSSPLPRVISALRR 126 Query: 117 AAMGMMFLPGDWRTTPE---KDIKDL-------------KSLSARQREILTMLAAGESNK 160 L G+ E + I+DL + L+AR+RE+L ++A G +N Sbjct: 127 ------LLSGESPLNQELAARLIQDLARRPGGGGNPPPAEELTAREREVLVLMARGRTNP 180 Query: 161 EIGRALNISTGTVKAHLESLYRRLEVKNRTQA 192 EI R L IS GT K+H++++ R+L V +RTQA Sbjct: 181 EIARELVISRGTAKSHVQNIIRKLGVSDRTQA 212 >UniRef50_B5JFN7 Response regulator receiver domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFN7_9BACT Length = 220 Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 58/218 (26%), Positives = 105/218 (48%), Gaps = 32/218 (14%) Query: 1 MQIVMFDRQSIFIHGMK--ISLQQRIPGVS-IQGASQADELWQKLESYPEALVMLDGDQ- 56 +QIV+ D Q++F+ G+K +SL + V +A E ++L P+ +V++D + Sbjct: 5 IQIVLADDQALFLEGLKTLLSLDDSLEIVGECHNGQEALEACRRLR--PQ-IVLMDLNMP 61 Query: 57 --DGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAV 114 DG +++ + PEV VL T + + E + + +D+ + A+ Sbjct: 62 VMDGVAATKAIKQ---ELPEVNVLTLTTFDDDERVFEALKAGSSGYLLKDTPSKQLVEAI 118 Query: 115 NSAAMGMMFL-----------------PGDWRTTPEKDIKDLKSLSARQREILTMLAAGE 157 + + G FL P + P ++ + LS R+ ++L L+ G Sbjct: 119 RAVSSGESFLQPSIASKVLAEFSRMSGPAAVKKAP---VQLREPLSQREEQVLVWLSRGC 175 Query: 158 SNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMM 195 SNKEI L+++ GTVK H+ ++ +L V +RTQAA+M Sbjct: 176 SNKEIASHLDLAEGTVKNHVSNVLGKLGVLDRTQAALM 213 >UniRef50_A6TKJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridiaceae RepID=A6TKJ8_ALKMQ Length = 205 Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 9/177 (5%) Query: 29 IQGASQADELWQKLESYPEALVMLD---GDQDGEFCYWLLQKTVVQFPEVKVLITATDCN 85 I+ A +E + + + ++D G QDG ++ K + K ++ + Sbjct: 29 IKEAENIEEAIDMMAKFSPEITLIDLNLGRQDG---LEIVNKARAKGMATKFIVLTSSSK 85 Query: 86 KRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGD---WRTTPEKDIKDLKSL 142 + V + +++ E A+ G F+ + ++T+ ++ L L Sbjct: 86 REDFLRAREAGVDGYILKEAFAEDILYALRIVLRGKKFIDPEVIQYQTSDIRENSHLDEL 145 Query: 143 SARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 + R+R++LT L G SN EIG+ L IS TVK H+ ++ +LE+ +RTQAA+ +N S Sbjct: 146 TPRERDVLTELGKGLSNFEIGKQLFISEHTVKKHVSNILSKLELNHRTQAALFVNNS 202 >UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphylococcaceae RepID=B9E7V9_MACCJ Length = 210 Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 18/205 (8%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLES--YPEALVM------L 52 M I++ D I GMK L I + EL + L+ P+ ++M L Sbjct: 4 MDIILVDDHHIVRQGMKFLLSTEASFNVIADFNNGRELLEHLDETQLPDLIIMDLVMPEL 63 Query: 53 DGDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFAL 112 +G + ++ ++P+VKVL+ ++ ++ + V+ +DS + Sbjct: 64 NGIE-------ATRRIKAKYPDVKVLVLSSFIDEEHVLGVMDAGADGYEMKDSEPKALIN 116 Query: 113 AVNSAAMG-MMFLPGDWRTTPEK-DIKDLKS-LSARQREILTMLAAGESNKEIGRALNIS 169 + A G +F P + ++ L++ LS R+ E+L ++ G +NKEI L +S Sbjct: 117 TIKQIAAGEQIFHPDVMKVRKSGMNLAHLRNPLSKRELEVLKAMSEGLTNKEIAEKLFVS 176 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAM 194 TVK H+ ++ +LEV +RTQA+M Sbjct: 177 EKTVKTHVSHIFAKLEVGDRTQASM 201 >UniRef50_B2A7N5 Two component transcriptional regulator, LuxR family n=5 Tax=Firmicutes RepID=B2A7N5_NATTJ Length = 232 Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 54/229 (23%), Positives = 106/229 (46%), Gaps = 38/229 (16%) Query: 1 MQIVMFDRQSIFIHGMK--ISLQQRIPGVSIQGASQADELWQKLESYPEALVMLD---GD 55 +++++ D Q+I +K I L+ + V++ +S +E + E ++++D Sbjct: 4 IKVMIADDQTILADSLKTIIDLEDDMEVVAV--SSNGEETLEISEKLLPDIILMDIRMPK 61 Query: 56 QDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVN 115 DG C L++ ++PE+K++I T + ++ + + + + +D + ++ Sbjct: 62 MDGVECTKKLKE---KYPEIKIIILTTFDHDEYIVDALSYGASGYLLKDIDGDKLISSIR 118 Query: 116 SAAMGMMFLP-----------GDWRTTPEKDIKD--LKS---------------LSARQR 147 A + +P + + P D KD LKS L+ R+ Sbjct: 119 DAYNDKLLIPTSIAAKLIGKIDNRKQQPTDDHKDEPLKSQDRKESQKEINLYEELTQREI 178 Query: 148 EILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMML 196 EI ++ AG SNK+I L I+ GTVK ++ ++Y +L VK RT A + L Sbjct: 179 EIAQLMVAGLSNKKIAEKLFITQGTVKNYITNIYSKLGVKERTSAVLYL 227 >UniRef50_D2BJB7 DNA-binding response regulator, LuxR family n=1 Tax=Dehalococcoides sp. VS RepID=D2BJB7_DEHSV Length = 222 Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 23/211 (10%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADE-LWQKLESYPEALVMLDGDQDGE 59 ++I + D + HG+K L+ +P + G S E + +K+ +++LD +G Sbjct: 8 IRIFVVDDHEVVRHGLKTMLET-VPDFIVVGESDGSEAVVEKICQSKADILLLDIRIEGS 66 Query: 60 FCYWLLQKTVVQFPEVKV-LITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAA 118 + + + + P +K+ LI+ D N ++ E + + +P+ E A+ A Sbjct: 67 DGFQIASQVKTRLPALKIILISGYDSN-LYITESLRHKIRGFIPKGCQKEYIFTAIRMVA 125 Query: 119 MGMMFLPGDWRTTPEKDIKDLKS----------------LSARQREILTMLAAGESNKEI 162 +G GD + I++L S L R+ +ILT+++AG++NK I Sbjct: 126 LGATVWHGDQIF---QAIRNLNSDENQITVSEVSVTNALLDPRELQILTLVSAGKTNKAI 182 Query: 163 GRALNISTGTVKAHLESLYRRLEVKNRTQAA 193 L+IS VK + L + NRTQ A Sbjct: 183 SAELDISIDMVKKTVSRLMHKFNSTNRTQLA 213 >UniRef50_A9I8N3 Transcriptional regulator, LuxR-family n=1 Tax=Bordetella petrii DSM 12804 RepID=A9I8N3_BORPD Length = 243 Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 55/220 (25%), Positives = 91/220 (41%), Gaps = 34/220 (15%) Query: 3 IVMFDRQSIFIHGMKISLQQRIPGVSIQGASQAD---ELWQKLESYPEALVMLDGDQDGE 59 I++ + + G+ + Q PG I G++ D E W++ L +LD D + Sbjct: 4 IIVIESRPWIRQGILQATAQAAPGWRIDGSAYLDMPVEPWREQGYELMLLSVLDLDDVHQ 63 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 + + P+ +L+ ++ W + V+ VP D+ E ++ Sbjct: 64 A---VTMARLTYMPKAILLLVSSRGVAPWANG-LPAGVVGCVPTDAPAEMLQASIRLVLA 119 Query: 120 GMMFLPG--------DWRTTPEKDIKDLKS-------------------LSARQREILTM 152 G MF P + P + D + L+ RQ E+L + Sbjct: 120 GGMFFPAQGIGKRVAEHLEAPCQPTADTDAAGPAPRELHFLHHESQALGLTPRQYEVLVL 179 Query: 153 LAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQA 192 LA G + K IGR LNI+ T K H E++Y+RL V NRT+A Sbjct: 180 LARGYTLKAIGRDLNIAVTTAKVHAETVYQRLHVHNRTEA 219 >UniRef50_Q5WJ71 Two-component response regulator n=5 Tax=Bacillaceae RepID=Q5WJ71_BACSK Length = 210 Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 70/131 (53%), Gaps = 9/131 (6%) Query: 73 PEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGD--WRT 130 P VK+++ T ++R+ E + + +D+ +E+ + A +G + L G + Sbjct: 73 PNVKIVMLTTFIDERYAIEALKAGAKGYILKDADMESLFATIEKALLGELVLDGQVAAKV 132 Query: 131 TPE-------KDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRR 183 P+ ++ + + L+ R++EI+ ++ G +N EI L +S GTVK ++ L+ + Sbjct: 133 MPKLLQHSAPQEKEQIPPLAEREKEIIRLVGQGRNNAEIAAELYLSVGTVKNYISQLFIK 192 Query: 184 LEVKNRTQAAM 194 L V++RTQ A+ Sbjct: 193 LGVRDRTQLAI 203 >UniRef50_C6VTJ6 Two component transcriptional regulator, LuxR family n=2 Tax=Sphingobacteriales RepID=C6VTJ6_DYAFD Length = 207 Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 45/200 (22%), Positives = 94/200 (47%), Gaps = 6/200 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGA-SQADELWQKLESYPEALVMLDGDQDGE 59 M + + D I + G+K L+ R G+ + G QAD L+S+ ++++D + Sbjct: 1 MDVFIIDDHPIVLQGLKNLLESR-EGIRVTGIFDQADSALAALDSHIPEVMLMDINLPDI 59 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 L Q+ PE++V+ + + + ++ V +++ + A+ +A Sbjct: 60 SGVTLCQQVKQAHPEIRVVALSIHNERSVIMSMLQSGASGYVLKNAIGDDIVAALQAAME 119 Query: 120 GMMFLPGDWRTT----PEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKA 175 G ++L + + P + K++ L+ R++EIL ++ G + ++I L IST TV++ Sbjct: 120 GQIYLCAETQKALNEAPGTEPKEIPRLTRREKEILELIGQGYTTQQIAAELFISTHTVES 179 Query: 176 HLESLYRRLEVKNRTQAAMM 195 H ++L + V N M Sbjct: 180 HRKNLKEKFGVPNTATVVRM 199 >UniRef50_B5FC84 Regulatory protein CsgD n=2 Tax=Vibrio fischeri RepID=B5FC84_VIBFM Length = 214 Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 16/206 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLD--GDQDG 58 M I + I L ++ G +I + DEL K + + LV+LD D Sbjct: 1 MSIYYLSSDPTLYSSLLIDLLEKSSGQAIVSLN-CDELVNKGKVDDDILVILDIKKQTDK 59 Query: 59 EFCYWL--LQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS 116 ++ ++ + + ++ E+ IT + K ++ + NV+ + ++ + V Sbjct: 60 KYKNYIDTINRNKLKVREILFNITDENIKKNIMK---YPNVVGVFYEKDNMDVISYGVKK 116 Query: 117 AAMGMMFLPGD--------WRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNI 168 G M+L +R + SL+ R+ EIL +LA+G SN +I +L + Sbjct: 117 IIEGEMWLSRKIINELIFAYREKQSAILSTSISLTTRESEILRLLASGASNVDIANSLFV 176 Query: 169 STGTVKAHLESLYRRLEVKNRTQAAM 194 S TVK HL +++++L VKNR QA M Sbjct: 177 SENTVKTHLYNVFKKLNVKNRLQAMM 202 >UniRef50_Q160B5 Nitrate/nitrite response regulator protein, putative n=2 Tax=Rhodobacteraceae RepID=Q160B5_ROSDO Length = 210 Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 2/94 (2%) Query: 99 AIVPRDSTVETFALAVNSAAMGMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGES 158 A V R + E+ A G M P + E +++LS ++REIL LA G + Sbjct: 106 ACVARSAPTESIVQTCLDVADGKMVFP--YLDIREIKTDPIETLSRKEREILDALAEGLT 163 Query: 159 NKEIGRALNISTGTVKAHLESLYRRLEVKNRTQA 192 NK++ L IST TVK HL +++ +L V+NRTQA Sbjct: 164 NKQLSARLEISTNTVKFHLSNIFDKLSVRNRTQA 197 >UniRef50_B0UG66 Two component transcriptional regulator, LuxR family n=2 Tax=Methylobacterium sp. 4-46 RepID=B0UG66_METS4 Length = 244 Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 34/214 (15%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 +I++ D S++ G++ ++ + V I AS L Q +++ LV++D Sbjct: 3 EILLVDEHSVYRVGLRNIIEANLDKVRITDASS---LAQVDKNFQADLVLID-------A 52 Query: 62 YWLLQKTVVQFPEVKVLITA------TDCNKR-----WLQEVIHFNVLAIVPRDSTVETF 110 + L ++ + + E++V + + N R L H + + P + Sbjct: 53 FNLSKEALERIKEMRVACRSMRFAVMSSSNARSDVLNCLSAGFHGFIYKMQPDSELIR-- 110 Query: 111 ALAVNSAAMGMMFLP------GDWRTTPEKDI---KDLKSLSARQREILTMLAAGESNKE 161 A+ G +++P D + I D L+ RQ EIL +LA G SNKE Sbjct: 111 --AITDLLSGRIYVPRWLADGDDVKPNTPASIALPSDRLKLTPRQHEILPLLAQGMSNKE 168 Query: 162 IGRALNISTGTVKAHLESLYRRLEVKNRTQAAMM 195 I +LNI+ GT K H +L R L +NRT+AA + Sbjct: 169 IANSLNIAAGTAKIHTAALLRALGARNRTEAAFI 202 >UniRef50_B4WJL3 Response regulator receiver domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WJL3_9SYNE Length = 242 Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 33/169 (19%) Query: 57 DGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS 116 DG ++ K +P +KVL+ T + + + + + + +D+ E A A+ S Sbjct: 65 DGVATTAMISK---HYPAIKVLVLTTFDDDQLIAQSMAVGAQGYLLKDTPSEELAAAIRS 121 Query: 117 AAMGM-MFLPG-------------------------DWRTTPEKDIKDLK----SLSARQ 146 A G F PG T+ E + DL +L+ R+ Sbjct: 122 VAKGYSQFGPGIVQKMIGALPNIAAPPVSRSTRASSALDTSLEANKVDLPPEVAALTPRE 181 Query: 147 REILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMM 195 E+L + G SNKEI + L +S GTVK H+ S+ RL +++RTQAA++ Sbjct: 182 TEVLVCIGNGASNKEIAQQLFLSEGTVKNHVTSVLSRLGLRDRTQAALL 230 >UniRef50_A5V3K4 Regulatory protein, LuxR n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V3K4_SPHWW Length = 861 Score = 59.7 bits (143), Expect = 5e-08, Method: Composition-based stats. Identities = 29/51 (56%), Positives = 35/51 (68%) Query: 142 LSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQA 192 LSAR+REIL LA GESNK LN+S TVK HL+ +YR+L NR +A Sbjct: 800 LSAREREILLSLAQGESNKSTAERLNVSEATVKFHLQRIYRKLGAHNRVKA 850 >UniRef50_D2SFS4 Two component transcriptional regulator, LuxR family n=2 Tax=Frankineae RepID=D2SFS4_9ACTO Length = 220 Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 19/181 (10%) Query: 23 RIPGVSIQGASQADELWQKLESYPEALVM------LDGDQDGEFCYWLLQKTVVQFPEVK 76 R+ G + GA +E+ + P ++M LDG ++ V + P V+ Sbjct: 28 RVVGTAADGAEAVEEVARL---APHVVLMDLSMPVLDG-------VAATRRIVEEHPSVE 77 Query: 77 VLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFL-PGDWRTTPEKD 135 VL+ + +++ + E + V +D+ A+ S A G L P RT Sbjct: 78 VLVLTSFSDRQRVIEALDAGAGGYVLKDTEPADLLAAIRSTARGHSPLDPRVARTVLHAR 137 Query: 136 IKDLKS--LSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAA 193 +++ L+ R++E+L ++ G +NK+I R L I TVKAHL S+++R+ V++RT A Sbjct: 138 RSPVRAAELTEREQEVLALVGHGLANKQIARRLGIRESTVKAHLTSVFQRIGVRDRTSAT 197 Query: 194 M 194 + Sbjct: 198 L 198 >UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q1ASU8_RUBXD Length = 207 Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 55/195 (28%), Positives = 98/195 (50%), Gaps = 6/195 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQG-ASQADELWQKLESYPEALVMLDGDQDGE 59 ++I++ D + G+ L R PG + G A +E+ + +V+LD + G Sbjct: 4 IRILVADDHPMLREGLSAVLGTR-PGFEVVGEAGDGEEVLRLASGLRPDVVLLDLEMPGT 62 Query: 60 FCYWLLQK-TVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAA 118 +L++ + P V+ TA D ++R L+ + ++ S E F AV + Sbjct: 63 GGVEVLRRLRGLDDPPKVVVFTAYD-DERLLEALREGARGCLLKGASRTEIFD-AVRTVH 120 Query: 119 MGMMFLPGDWRTTPEKDIK-DLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHL 177 G +P + K+++ + + L+ R+ E+L ++A G +N+E+ RAL IS TVK H+ Sbjct: 121 AGGSVIPPEITARVLKEMRGESEPLTPRELEVLRLVARGLTNREVARALFISERTVKFHV 180 Query: 178 ESLYRRLEVKNRTQA 192 SL +L +NRTQA Sbjct: 181 SSLLAKLRAENRTQA 195 >UniRef50_C1F7G9 Two-component response regulator n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7G9_ACIC5 Length = 213 Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 1/91 (1%) Query: 103 RDSTVETFALAVNSAAMGMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEI 162 +D+T E A+ + G + LP + I + L+ R+ EIL MLA G +NKEI Sbjct: 111 KDTTQEEILEAIAAVHAGSLHLPRHIAQRISERIGR-QELTRRETEILEMLAKGLTNKEI 169 Query: 163 GRALNISTGTVKAHLESLYRRLEVKNRTQAA 193 GR IS T + H+ S+ ++LEV +RT+AA Sbjct: 170 GRVFGISENTARNHVNSIIQKLEVSDRTEAA 200 >UniRef50_C6BLL9 Two component transcriptional regulator, LuxR family n=12 Tax=Ralstonia RepID=C6BLL9_RALP1 Length = 231 Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 28/200 (14%) Query: 22 QRIPGVSIQGASQADE-LWQKLESYPEALVML-----DGDQDGEFCYWLLQKTVVQFPEV 75 Q +P +S + + DE L++ L ++ +A + L G D LLQ+ P Sbjct: 21 QSLPAISEVVSVEPDETLFENLAAHGDAELALVGLPIPGIDDVPALSRLLQQP---HPRH 77 Query: 76 KVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGDWRTTPEKD 135 ++ TD + ++ ++ NV A + + + + A A+ G ++P + Sbjct: 78 IAVLGETD-SAAHVRALMQLNVSAYLLKSYSGKLIAAALELVLAGGRYVPASVVLARPEA 136 Query: 136 IKD----------LKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLE 185 I + L+ RQ EIL +L+ G K I R L IS T KAH+ +LYRRLE Sbjct: 137 IAAASPGGNNDCAMLGLTQRQYEILVLLSRGHPVKTISRMLGISEATAKAHINALYRRLE 196 Query: 186 VKNRTQA--------AMMLN 197 V++RT+A AM+LN Sbjct: 197 VRSRTEAVFVATQRGAMLLN 216 >UniRef50_B9ZR28 Transcriptional regulator, LuxR family n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZR28_9GAMM Length = 232 Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 28/51 (54%), Positives = 39/51 (76%) Query: 142 LSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQA 192 L+ R+ EIL ML +GE+N I + L IS TVK+HL +++R++EVKNRTQA Sbjct: 155 LTQRELEILAMLGSGETNMNIAKQLFISEHTVKSHLYNIFRKIEVKNRTQA 205 >UniRef50_B1IL87 Transcriptional regulator, LuxR family n=5 Tax=Clostridium RepID=B1IL87_CLOBK Length = 865 Score = 59.7 bits (143), Expect = 6e-08, Method: Composition-based stats. Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 2/61 (3%) Query: 132 PEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQ 191 PEK +L L+ R++E++ +L G SNK+IG+ LNIS TVK H+ ++Y +L+V NR Q Sbjct: 795 PEKVKGEL--LTEREKEVMEILFEGSSNKQIGKRLNISLATVKTHMINIYSKLQVSNRVQ 852 Query: 192 A 192 A Sbjct: 853 A 853 >UniRef50_B0UJT9 Two component transcriptional regulator, LuxR family n=11 Tax=Alphaproteobacteria RepID=B0UJT9_METS4 Length = 251 Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 13/202 (6%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQ---GASQADELWQKLESYPEALVMLDGDQD 57 M +++ D +F + +++ P +++ G A +L S L +LD Sbjct: 32 MHLMIVDDHPLFREALTSAVRLAFPAAAVEEADGIEAACAALSRLRSV--DLTLLDLSMR 89 Query: 58 GEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSA 117 G + L +FP + +L+ + + R ++E + VP+ + A+ Sbjct: 90 GVNGFDGLLAIRTRFPRIPILVVSGMDDPRIVREALSHGAAGFVPKAAGKAVLTRAITDV 149 Query: 118 AMGMMFLP-------GDWRTTPEKDI-KDLKSLSARQREILTMLAAGESNKEIGRALNIS 169 G +F+P G+ + I + + L+ +Q +L M+ G+ NK+I L + Sbjct: 150 LNGAIFVPDGVGAQEGEAPRGGKPPIAQRIAELTPQQVRVLLMIRQGKLNKQIAHELGVG 209 Query: 170 TGTVKAHLESLYRRLEVKNRTQ 191 TVKAH+ + R+L V +RTQ Sbjct: 210 DSTVKAHVSEILRKLGVISRTQ 231 >UniRef50_C5C4C2 Two component transcriptional regulator, LuxR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C4C2_BEUC1 Length = 216 Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 102/209 (48%), Gaps = 18/209 (8%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEA---LVMLDGDQD 57 +++++ D Q++ G++ L + P V + ++AD+ L + E +V+LD Sbjct: 2 IRLLVVDDQTLVRQGIR-GLLELAPDVDV--VAEADDGLAGLAAVREHDPDVVLLDLRMP 58 Query: 58 GEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS- 116 WLL+ +V VL+ T + I + +D T+++ AV + Sbjct: 59 RHDGLWLLEALRAGELDVPVLVLTTFDDDELALAAIAAGARGYLLKDVTLDSLVDAVRTL 118 Query: 117 AAMGMMFLPG---------DWRTTPEKDIK--DLKSLSARQREILTMLAAGESNKEIGRA 165 A G + P + P D D++ L++R+ EIL +LAAG SN+EI A Sbjct: 119 AGGGTLVQPAITERVLRAVRAGSVPLDDAAAGDVQELTSRELEILRLLAAGYSNREIAEA 178 Query: 166 LNISTGTVKAHLESLYRRLEVKNRTQAAM 194 L+++ GTVK H+ ++ +L ++RT+A + Sbjct: 179 LHLAEGTVKNHVSTVLLKLGTRDRTRAVL 207 >UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus RepID=A9WA66_CHLAA Length = 218 Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 27/53 (50%), Positives = 40/53 (75%) Query: 142 LSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAM 194 L+ R+R+IL +LA G +N+EIG L +S GTVK HL ++ +L V++RTQAA+ Sbjct: 159 LTPRERDILRLLAQGYTNQEIGEQLALSVGTVKNHLSVIFAKLAVRDRTQAAL 211 >UniRef50_Q0VRG1 DNA-binding response regulator, LuxR family n=1 Tax=Alcanivorax borkumensis SK2 RepID=Q0VRG1_ALCBS Length = 224 Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 7/84 (8%) Query: 113 AVNSAAMGMMFLPGDW-------RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRA 165 A++ G + P + R TP + +SL++R+R++L + G SN EI A Sbjct: 124 ALDEVCKGRSWFPRSYMDYLVRHRKTPTRCGHIFESLTSRERQMLDHVVRGMSNHEIADA 183 Query: 166 LNISTGTVKAHLESLYRRLEVKNR 189 + +ST TVKAHL+SLYR++ VK+R Sbjct: 184 ICLSTHTVKAHLQSLYRKVGVKSR 207 >UniRef50_A8ZMB6 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZMB6_ACAM1 Length = 215 Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 3/74 (4%) Query: 124 LPGDWRTTPEKDIKDLKS---LSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 L G +T D L + L+ R+ E+L +LA G +NKEI +A N+S GTVK H+ ++ Sbjct: 134 LIGSLKTQRAGDAPKLPTDTPLTTRELEVLKLLAKGNTNKEIAKAFNLSEGTVKNHVSNI 193 Query: 181 YRRLEVKNRTQAAM 194 RL +++RTQAA+ Sbjct: 194 LMRLGLRDRTQAAV 207 >UniRef50_C6D0G6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=C6D0G6_PAESJ Length = 225 Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 53/215 (24%), Positives = 100/215 (46%), Gaps = 26/215 (12%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQG-ASQADELWQKLESYPEALVMLDGDQ--- 56 ++I++ D I + G+ L + P + G A E +K +V++D + Sbjct: 3 IKILLADDHQIVLKGISFFLAMQ-PDFELVGEAHNGKEAVEKAGELQPDIVLMDLNMPIM 61 Query: 57 DGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS 116 DG L+++ Q P +KVL+ + ++ + + + + +D + A A+ S Sbjct: 62 DGIEASALIKE---QHPHIKVLVLTSFADQSHIVPALQTGAIGYMLKDVEPDQLAEAIRS 118 Query: 117 AAMGMMFLPGDWRTT-----------------PEKDIKDLKSLSARQREILTMLAAGESN 159 A G + L D +D K L++L+ R+ E+L +L G SN Sbjct: 119 AYKGNIQLHPDISRALLSRPEPEPRPEPVIQHSNRD-KSLEALTPRELEVLELLTKGLSN 177 Query: 160 KEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAM 194 K+I + L ++ TVK H+ S+ +L++ +RTQAA+ Sbjct: 178 KDIAQTLIVAEKTVKTHVSSILSKLDLSDRTQAAL 212 >UniRef50_Q21QQ8 ATP-dependent transcriptional regulator, MalT-like, LuxR family n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21QQ8_RHOFD Length = 894 Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 25/55 (45%), Positives = 44/55 (80%) Query: 141 SLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMM 195 +L+ R+R++L ++A+G+SNKE+ R++NIS TVK HL+S++ +L V+ R QA ++ Sbjct: 831 TLTERERDVLMLVASGQSNKEVARSMNISAETVKTHLKSIFGKLGVQQREQAVVL 885 >UniRef50_D2PVA7 Two component transcriptional regulator, LuxR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PVA7_9ACTO Length = 217 Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 29/65 (44%), Positives = 41/65 (63%) Query: 130 TTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNR 189 +TP L++LS R+REIL +L G SN +I R L +S GT+K H+ L L+ +NR Sbjct: 147 STPTDPDPQLEALSGREREILALLGEGLSNADIARRLYLSEGTIKGHVSRLMADLDCQNR 206 Query: 190 TQAAM 194 TQ A+ Sbjct: 207 TQLAL 211 >UniRef50_B3RA82 Response regulator protein; Response regulator receiver domain, HTH LuxR domain; higly similar to B. subtilis Transcriptional regulatory protein degU (Protease production enhancer protein) n=1 Tax=Cupriavidus taiwanensis RepID=B3RA82_CUPTR Length = 223 Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 44/194 (22%), Positives = 84/194 (43%), Gaps = 3/194 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G+++ L+ I A+ +E + LV+ D Sbjct: 5 LRVLLVDDHPFVLDGVRLRLEATGEMTVIGQAASVEEAIVLAGRHAPDLVVSDIHMPDAN 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L + QFP V+V+ + + +++ V A V +++ A+ + A G Sbjct: 65 GLQLAARFAEQFPSVRVIALSMHKDPEYVRRAFALGVAAYVLKEAPAHELVTAIRTVAAG 124 Query: 121 MMFLPGDWRT---TPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHL 177 +L + + T E ++L+ ++ +L +LA G SNKEI L S TV+ H Sbjct: 125 GTYLNAELQAFLHTDEPPPSSRRALTPKEATVLKLLAEGRSNKEIAERLGTSVRTVETHR 184 Query: 178 ESLYRRLEVKNRTQ 191 L R+L V R + Sbjct: 185 LHLRRKLRVGGRAE 198 >UniRef50_Q21WT9 Two component transcriptional regulator, LuxR family n=2 Tax=Comamonadaceae RepID=Q21WT9_RHOFD Length = 212 Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 59/120 (49%) Query: 72 FPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGDWRTT 131 PE+ +L+ + N + +++ + + ++ AV G +++P D T Sbjct: 76 HPELPILMLSGMANPQMVRKALASGAAGFLSKNGHSADLLAAVCLVLAGEVYVPMDLLTP 135 Query: 132 PEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQ 191 K ++ RQ E+L +L G SNKEI AL ++ T K H+ +L R +VK+RTQ Sbjct: 136 GASPGKSAPQVTPRQAEVLALLLDGRSNKEISEALALTDDTTKNHVTALLRAFDVKSRTQ 195 >UniRef50_Q1IP51 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IP51_ACIBL Length = 219 Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 18/154 (11%) Query: 49 LVMLDGDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVE 108 LV+L G ++G+ + ++ P++++++T T + + + + V ++ Sbjct: 54 LVLL-GSRNGQNLFDVMASLKAARPDLRIIVTGTGADDETILKAVAAGAKGYVDEAASPA 112 Query: 109 TFALAVNSAAMGMMFLP-------------GDWRTTPEKDIKDLKSLSARQREILTMLAA 155 F A+ G ++ P R P + + + R++E+L +L A Sbjct: 113 EFVQAIRIVNQGSVWAPRRVLSIFIERVTSSPGRIFPAGRV----TFTDREKEVLELLVA 168 Query: 156 GESNKEIGRALNISTGTVKAHLESLYRRLEVKNR 189 G SNKEIG AL I TVKAH+ L R++ V+NR Sbjct: 169 GRSNKEIGSALGIEERTVKAHVAKLMRKVGVQNR 202 >UniRef50_A4XVC9 Regulatory protein, LuxR n=11 Tax=Bacteria RepID=A4XVC9_PSEMY Length = 904 Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 26/53 (49%), Positives = 42/53 (79%) Query: 140 KSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQA 192 + L+ R+RE++ + A G SN+EIG+ L+++ GTVK HL ++Y +L+V+NRTQA Sbjct: 840 EGLTEREREVVCLAAKGLSNEEIGQQLSLALGTVKWHLHNIYEKLKVRNRTQA 892 >UniRef50_C6WUU1 Transcriptional regulator, LuxR family n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WUU1_METML Length = 209 Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 29/59 (49%), Positives = 40/59 (67%) Query: 139 LKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLN 197 L L+ R+RE+ +A G SNKE+ + LNI+ TVKAHL + + RL K+R Q A+MLN Sbjct: 149 LDQLTNREREVAVEVAKGLSNKEVAKLLNITERTVKAHLAATFERLGAKDRLQLALMLN 207 >UniRef50_A9B4P1 Two component transcriptional regulator, LuxR family n=11 Tax=Bacteria RepID=A9B4P1_HERA2 Length = 257 Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 29/63 (46%), Positives = 42/63 (66%) Query: 132 PEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQ 191 P+ DI LS R+ E+L +A+G +NK+I AL IST TVK H+ S+ R+L + +RTQ Sbjct: 157 PDLDISLFSPLSDREIEVLEHIASGATNKDIADALKISTQTVKNHISSILRKLSLNDRTQ 216 Query: 192 AAM 194 A + Sbjct: 217 AVL 219 >UniRef50_Q1N2F1 Regulatory protein CsgD n=1 Tax=Bermanella marisrubri RepID=Q1N2F1_9GAMM Length = 216 Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 27/64 (42%), Positives = 43/64 (67%) Query: 129 RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKN 188 R P + K +L+ R+ +IL++ A+G N +I ALN+ST TVK H+ +L+++L+V N Sbjct: 139 RRPPAPEQKPAHNLTRRESQILSLSASGAKNADIAAALNVSTHTVKTHMYNLFKKLDVSN 198 Query: 189 RTQA 192 R QA Sbjct: 199 RIQA 202 >UniRef50_A4WGH9 Two component transcriptional regulator, LuxR family n=1 Tax=Enterobacter sp. 638 RepID=A4WGH9_ENT38 Length = 202 Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 14/200 (7%) Query: 1 MQIVMFDRQSIFIHGMKISL-QQRIPGVSIQGASQADELWQKLESYPEA-LVMLDGDQDG 58 M I++ D +F M L QQ P + I+ S + EL LE++P +++LD G Sbjct: 1 MTIIIADDHPLFRDAMAKKLAQQNDPDI-IEAGSFS-ELESVLETFPAPDILILDLQFPG 58 Query: 59 EFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAA 118 L + ++I + + + +Q V+ V + ++ E + Sbjct: 59 LDSLSKLVTLKNKLKRTALIIVSMNTDAALVQAVMATGVDGYISKNVPPEQLLSDIADIQ 118 Query: 119 MGMM---FLPG---DWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 G + ++PG + R TP +L L+ RQRE+L +L G+SNK+I ++LNIS T Sbjct: 119 NGNIVVNYIPGTLPNLRVTP----AELDLLTERQREVLQLLVQGKSNKQIAQSLNISPFT 174 Query: 173 VKAHLESLYRRLEVKNRTQA 192 V+ H+ + L V RT A Sbjct: 175 VRIHVSQVLHVLGVPTRTVA 194 >UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6ADI3_LEIXX Length = 207 Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 10/198 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLD----GDQ 56 ++IV+ D I HGM+ L + + +E L+S +V++D GD Sbjct: 2 IRIVLVDDHPILRHGMRTLLDTQEDFEVVGDCGDPEEYRLLLKSARPDIVLMDLALGGDT 61 Query: 57 DGEFCYWLLQKTVVQFPEVKVLI-TATDCNKRWLQEVIHFNVLAIVPRDST-VETFALAV 114 DG L T P VL+ T D + +++ + + +DST VE FA Sbjct: 62 DG---VALTAHTRATSPSTAVLVFTTYDSDADFVRS-LDAGASGYLLKDSTPVELFAAIR 117 Query: 115 NSAAMGMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVK 174 + G P ++ +SL+ R+ E+L +LA G +N+++G L +S TVK Sbjct: 118 TARDGGSALSPAVASRLMDRMRAPQESLTPREIEVLALLATGRTNRQVGERLFVSETTVK 177 Query: 175 AHLESLYRRLEVKNRTQA 192 H+ ++ +L V R A Sbjct: 178 THVNHIFTKLGVDTRAAA 195 >UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ Length = 218 Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 14/205 (6%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQK-LESYPEALVMLDGDQDGE 59 M+IV+ D ++ G + L + + A+ E +QK LE P+ L++ GE Sbjct: 1 MKIVIADDHAVVRTGFSMILNYQEDMEVVATAADGVEAYQKVLEHRPDVLILDLSMPPGE 60 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 K FP+ K+LI ++ +L V+ + ++S E LAV + Sbjct: 61 SGLIATSKISESFPDTKILILTMFDDEEYLFHVLKSGAKGYILKNSPDEQLILAVRTVYQ 120 Query: 120 GMMFLPGDWRTTPEKDIKD-------------LKSLSARQREILTMLAAGESNKEIGRAL 166 G ++ T+ + + K LS R+ EIL ++A G NK+I L Sbjct: 121 GETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNKDIAEKL 180 Query: 167 NISTGTVKAHLESLYRRLEVKNRTQ 191 +S TV+AH + +L +K++ + Sbjct: 181 FVSVKTVEAHKTHIMTKLNLKSKPE 205 >UniRef50_C6I025 Two component transcriptional regulator, LuxR family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I025_9BACT Length = 219 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 59/102 (57%), Gaps = 14/102 (13%) Query: 103 RDSTVETFALAVNSAAMGMMFLPGDWR----------TTPEKDIKDLKSLSARQREILTM 152 +DS +++ L + + A+G +++ D R ++P + + LSAR+ E+L + Sbjct: 114 KDSELDSLILGIQAVALGSLYV--DPRIAHLAIRRILSSPAPETE--TPLSARETEVLRL 169 Query: 153 LAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAM 194 LA G+SN++I AL IS TVKAH++S+ +L R AA+ Sbjct: 170 LAEGQSNRDIAVALGISVSTVKAHIQSILVKLSAATRADAAV 211 >UniRef50_A4J6C2 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=A4J6C2_DESRM Length = 218 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 10/132 (7%) Query: 73 PEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLP------- 125 P + ++ +L E+I + + V +D + + A G F+P Sbjct: 77 PNIGIIALTIHDQDEYLFELIKYGISGYVLKDIHPDQLIKTILGVAQGESFIPPSLTARV 136 Query: 126 -GDWRTTPEKDIKDLKSLSARQREI--LTMLAAGESNKEIGRALNISTGTVKAHLESLYR 182 ++ D + K L+ +REI L +A G+SNK I AL IS TVK HL ++++ Sbjct: 137 LAEFTRLSSGDYSEKKHLNLTEREIEVLKQVAKGQSNKAIANALYISEKTVKNHLTNIFQ 196 Query: 183 RLEVKNRTQAAM 194 ++ V +RTQAA+ Sbjct: 197 KIGVADRTQAAL 208 >UniRef50_B8KRU1 Transcriptional regulator, LuxR family n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KRU1_9GAMM Length = 206 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 45/67 (67%) Query: 131 TPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRT 190 TP+ +++ +L+ R+ E+ ++ G +NKEI L +S TVKAHL +++ +LE+++R Sbjct: 135 TPQPEVEGFDALTHREYEVAALVGKGANNKEIAELLGVSERTVKAHLTAIFEKLELRDRV 194 Query: 191 QAAMMLN 197 Q A+ +N Sbjct: 195 QLALAVN 201 >UniRef50_Q1AXM9 Transcriptional regulator, LuxR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AXM9_RUBXD Length = 253 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 27/53 (50%), Positives = 39/53 (73%) Query: 140 KSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQA 192 + LS R+ E+L +A+G +N EIGR L +S GTVK+H S+YR+L V+NR +A Sbjct: 190 EPLSERELEVLKHIASGRTNSEIGRHLYVSVGTVKSHTGSIYRKLGVRNRAEA 242 >UniRef50_Q0FEN9 DNA-binding response regulator, LuxR family protein n=6 Tax=Rhodobacterales RepID=Q0FEN9_9RHOB Length = 222 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 13/90 (14%) Query: 108 ETFALAVNSAAMGMMFLPGDWRTTPEKDIKDLKS-----LSARQREILTMLAAGESNKEI 162 E A+ A+ M+F P D+++L+ L+ R++ IL LA G SNKE+ Sbjct: 117 ELLETAITVASGKMVF--------PFMDVRELQDDPLFMLTKREKIILQFLADGSSNKEL 168 Query: 163 GRALNISTGTVKAHLESLYRRLEVKNRTQA 192 ++ IS TVK HL +LY +L VKNR+QA Sbjct: 169 AESMKISINTVKFHLSNLYEKLGVKNRSQA 198 >UniRef50_Q3ZWI9 DNA-binding response regulator, LuxR family n=3 Tax=Dehalococcoides RepID=Q3ZWI9_DEHSC Length = 228 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 48/209 (22%), Positives = 98/209 (46%), Gaps = 16/209 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGAS--QADELWQKLESYPEALVMLDGDQDG 58 +++ + D + G+K + + G S Q L + ++ P+ +V+LD +G Sbjct: 15 IKVFIVDDHEVVRQGLKAIFKDE-SDIDFAGESDGQKSVLGEIAKAQPD-IVLLDIRING 72 Query: 59 EFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAA 118 + + + + P VK+L+ + ++ +L E +++ V +P+ S+ + A+ A Sbjct: 73 SDGFEIACQLNNKLPYVKILMISGYESELYLSESLNYKVKGFIPKGSSKDYVCAAIRMIA 132 Query: 119 MGMMFLPGDW------------RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRAL 166 +G G+ T +K I+D + R+ ++L +LA G+ NKEI L Sbjct: 133 LGGTVWHGELLYRAICGLRPINETLNKKMIRDETHIKPRELKVLVLLAEGKLNKEISCEL 192 Query: 167 NISTGTVKAHLESLYRRLEVKNRTQAAMM 195 ++S TVK ++ L ++ NR Q A + Sbjct: 193 HVSIDTVKKDIQQLKKKYGATNRIQLATI 221 >UniRef50_A9AVS1 Two component transcriptional regulator, LuxR family n=6 Tax=Chloroflexi (class) RepID=A9AVS1_HERA2 Length = 250 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 20/211 (9%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESY--PEALVMLDGDQDGE 59 IV+ +I+ G++ Q +P I G + + +L Y P+ +VM D D G Sbjct: 22 NIVLVHAHTIYREGLRYHFGQ-VPRYKIIGEASNGQQAIRLVDYSNPDIIVM-DVDLPGV 79 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPR----DSTVETFA---- 111 + + + P + V++ + ++ + + + V A + R D + + Sbjct: 80 NGIEVARTVKLNHPNIGVILLSDINDQEGIVKSLRAGVAAYLSRTIDWDDLINSVDMVRS 139 Query: 112 -------LAVNSAAMGMMFLPGDWRTTPEKDIKDLKS-LSARQREILTMLAAGESNKEIG 163 L +N+ A+ + + T + + + S +S R+ E+L ++AAG++NKEI Sbjct: 140 GNYPINDLVLNTPAVAAAVMDSFRQLTMDTHTEHVYSPMSPREIEVLELVAAGQTNKEIA 199 Query: 164 RALNISTGTVKAHLESLYRRLEVKNRTQAAM 194 L IS TVK H+ S+ R+L V +RTQA + Sbjct: 200 ARLEISNQTVKNHISSILRKLAVNDRTQAVV 230 >UniRef50_A4SWC0 Two component transcriptional regulator, LuxR family n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 RepID=A4SWC0_POLSQ Length = 197 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/60 (46%), Positives = 42/60 (70%) Query: 135 DIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAM 194 D +L L+ RQ+EIL ++ G+SNK I +LNIS TVK HL ++++++V NRTQA + Sbjct: 130 DEAELTQLTDRQKEILAHISNGDSNKMIAYSLNISEQTVKVHLGEIFKKIKVFNRTQAVI 189 >UniRef50_Q7NJN3 Gsr1799 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NJN3_GLOVI Length = 74 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/59 (47%), Positives = 42/59 (71%) Query: 139 LKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLN 197 L +L+ R+R++ ++A G SN EI R+L IS GTVK H+ + RL V++RTQAA++ N Sbjct: 10 LTALTPRERQVSGLIARGASNAEIARSLYISEGTVKFHITKILSRLGVRDRTQAAILAN 68 >UniRef50_A6TNJ5 Two component transcriptional regulator, LuxR family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TNJ5_ALKMQ Length = 212 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 48/202 (23%), Positives = 98/202 (48%), Gaps = 12/202 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQG-ASQADELWQKLESYPEALVMLD---GDQ 56 + I++ D +I +G++ SL +R G+ + G A E + K+ +V+LD D Sbjct: 6 VTILLVDDHAIVRYGIR-SLIERNDGLKVCGEAGTLQEAYHKVSDLKPDIVLLDIKLPDG 64 Query: 57 DGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS 116 DG ++K V P+VKV+I + E + + +D + A+ + Sbjct: 65 DGAAGCREIKKRV---PDVKVIILTAYAEDSIILEAVKAGAEGYLLKDIDSKNIITAIRN 121 Query: 117 AAMGMMFLPGDWRTTPEKDIKDLKS----LSARQREILTMLAAGESNKEIGRALNISTGT 172 G L + + ++K S L+++ + IL +++ G+SNK+I + + +S T Sbjct: 122 VVGGKTSLANEAISKVLNEVKQNCSGEDDLTSQDKSILELISQGKSNKDIAKEIYVSEKT 181 Query: 173 VKAHLESLYRRLEVKNRTQAAM 194 V+ + +++++ NRT+AA+ Sbjct: 182 VRNNASRIFKKINAGNRTEAAI 203 >UniRef50_D2LW99 Two component transcriptional regulator, LuxR family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LW99_BACS4 Length = 222 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 48/208 (23%), Positives = 91/208 (43%), Gaps = 18/208 (8%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQAD-ELWQKLESYPEALVMLDGDQDGE 59 +++V+ D I G K+ L + + G +Q E+ + + +V+LD + Sbjct: 5 LKVVIADDHPIVRDGFKVLLSTT-DSIEVVGTAQNGVEVVELVTQLHPDVVLLDMYMPNK 63 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 L ++ PE KVL+ ++ N + + + ++ +D + A+ + Sbjct: 64 NGLEALADIKIKHPETKVLMISSMINDDVVIDCLSLGANGVLLKDWPTDKIIHAMKESVA 123 Query: 120 GMMFLP--------GDWRTTPEKDIKDLK--------SLSARQREILTMLAAGESNKEIG 163 G M +P G W+ + KD SL R++EIL + G+ N EI Sbjct: 124 GQMIIPECYSTKLIGAWKKQNKPQHKDWHEVINKLPISLYEREKEILAKIMDGKKNSEIA 183 Query: 164 RALNISTGTVKAHLESLYRRLEVKNRTQ 191 R L +S GT+K + S+Y+++ V R + Sbjct: 184 RELYLSIGTIKNYTSSIYKKIGVSKRKE 211 >UniRef50_A3VS17 Putative two-component response regulator protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VS17_9PROT Length = 217 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 49/205 (23%), Positives = 98/205 (47%), Gaps = 13/205 (6%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 ++V+ D + G++++L QR V GA+ A+ + + P+ +++ +DG Sbjct: 8 RLVIIDDHELAREGLRLALVQRGFEVVAVGATAAEAIELTQTTDPDVVLLDIRLRDGPDG 67 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDS----------TVETFA 111 V V++ + + +++ + + +D+ TV + Sbjct: 68 LAAAAGIKALNQSVAVVMLSLHDDADYVRAALKAGAKGYILKDTALDELCAELKTVLSGG 127 Query: 112 LAVNSAAMGMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTG 171 +A+ A + + P PE + ++ L+ R+RE+L +++ G++NK I R L IS Sbjct: 128 VAIPQALLAAVLTP-KAAAPPEYHL--VERLTDREREVLRLISEGKTNKAIARELVISPA 184 Query: 172 TVKAHLESLYRRLEVKNRTQAAMML 196 TVKAH+E +L +RTQAA+M+ Sbjct: 185 TVKAHVERCLAKLGAADRTQAAVMM 209 >UniRef50_C6QGA5 Transcriptional regulator, LuxR family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QGA5_9RHIZ Length = 241 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/60 (46%), Positives = 42/60 (70%) Query: 138 DLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLN 197 D+ SLS RQRE+L ++A G+SN EI L+ S TVK H+ ++ ++L + NRT+AA + N Sbjct: 170 DIDSLSPRQREVLLLVAVGKSNLEISEELSCSLNTVKRHVTAVLQKLHLPNRTRAANLAN 229 >UniRef50_A9DNR9 Regulatory protein n=2 Tax=Flavobacteriales RepID=A9DNR9_9FLAO Length = 146 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 26/51 (50%), Positives = 37/51 (72%) Query: 142 LSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQA 192 LS R+ E+L +LA G SNKEI L++S T+K H+ ++Y +L+VK RTQA Sbjct: 84 LSKREYEVLCLLAEGHSNKEIASLLSVSESTIKTHVSNVYTKLDVKRRTQA 134 >UniRef50_A1AXR1 Two component transcriptional regulator, LuxR family n=2 Tax=sulfur-oxidizing symbionts RepID=A1AXR1_RUTMC Length = 209 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 46/208 (22%), Positives = 98/208 (47%), Gaps = 16/208 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLD---GDQD 57 M+I + D ++F +G+ L+ + +S A+ ++ ++ S +++LD Sbjct: 1 MKIYIIDDHTLFRNGLIALLESK--QISASAAASPEQGLAEIPSLSVDIILLDLRMPQMS 58 Query: 58 GEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSA 117 G L++ + P +++ T + L+ + + +D + A+N Sbjct: 59 GLEVLKTLKEKNITTP---IVMLTTSTQEYDLRNCLKHGAQGYLLKDMDPDELVDALNEV 115 Query: 118 AMGMMFLPGDWRTTPEKDIKD--------LKSLSARQREILTMLAAGESNKEIGRALNIS 169 G + + D K ++D SL++R++E+ +++G SNK I R L IS Sbjct: 116 VKGSIVVAQDMTYILAKALRDELTDNEPSFDSLTSREKEVACQVSSGYSNKVIARELGIS 175 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMMLN 197 GTVK H++S+ ++L + +R + A+M+ Sbjct: 176 DGTVKLHVKSILKKLSLSSRVEVAVMVT 203 >UniRef50_UPI0001C312E2 transcriptional regulator, LuxR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C312E2 Length = 196 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 49/193 (25%), Positives = 92/193 (47%), Gaps = 17/193 (8%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + +++ DR+ + + G + LQ++ A+ +++ P +V +DG + G+ Sbjct: 9 LTVLVVDREELALWGFSLVLQRQTWVRRCAVANDLATARKRVAELPVDVVAVDG-RFGDD 67 Query: 61 CYWLLQKTVVQF-PEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 LQ + P ++V++T D + R L L + R V A+ +A + Sbjct: 68 ALSALQADLRAISPCIRVVLT-VDASDRTLPP------LPTIDRTWPVARLLTALRAAGL 120 Query: 120 GMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLES 179 T P LS R+R++LT+++ G +N +IGR+L +S T+K H S Sbjct: 121 D--------DTAPIHRPPSPTRLSERERQVLTLVSEGSTNAQIGRSLCLSPHTIKQHTSS 172 Query: 180 LYRRLEVKNRTQA 192 +YR+L +NR +A Sbjct: 173 VYRKLHARNRAEA 185 >UniRef50_Q7UVB4 Nitrate/nitrite regulatory protein narP n=1 Tax=Rhodopirellula baltica RepID=Q7UVB4_RHOBA Length = 210 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 24/188 (12%) Query: 24 IPGVSIQGASQADELWQKLE---SYPEALVMLDGDQDGEFCYWLLQKTVVQFPEVKVLIT 80 + G I+ +QAD+ LE + P V+LD +G L + + P++ +L+ Sbjct: 22 LEGTGIEVVAQADKAADALEIVSNTPLDTVLLDIRMEGGDGLNTLGRIKLDHPDLPILLF 81 Query: 81 ATDCNKRWLQEVIHFN----VLAIVPRDSTVETFALAVNSA----------AMGMMFLPG 126 + N ++ + +L P +E LA + G + P Sbjct: 82 SGYDNPTYVARAVALGACGYILKTAPVSRLIEALNLAFDGQQSWTREELRRVTGALATP- 140 Query: 127 DWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEV 186 R + D+ L+ R+ E+L +A G +NKEI + L IS TVK H++ + R+L V Sbjct: 141 --RMNQDIDV----PLTQRESEVLRQMALGLTNKEIAKMLGISYETVKEHVQHILRKLGV 194 Query: 187 KNRTQAAM 194 +RTQAA+ Sbjct: 195 SDRTQAAV 202 >UniRef50_B9JN67 Transcriptional regulator protein n=2 Tax=Agrobacterium RepID=B9JN67_AGRRK Length = 897 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/54 (51%), Positives = 38/54 (70%) Query: 142 LSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMM 195 L+ R+R +L +L+AG SNKEIGR L++S TVK HL ++Y +L V RT A M Sbjct: 836 LTDRERSVLRLLSAGLSNKEIGRKLDLSNNTVKFHLRNIYAKLNVTTRTAAVTM 889 >UniRef50_C7LUR5 Transcriptional regulator, LuxR family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LUR5_DESBD Length = 335 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/65 (44%), Positives = 46/65 (70%), Gaps = 3/65 (4%) Query: 130 TTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNR 189 + PE DL S R++EIL MLAAG +NK+I + L +S TVK+H+ ++Y++++V NR Sbjct: 262 SAPENGQADL---SQREQEILLMLAAGATNKDIAQKLFLSLNTVKSHIYNIYKKIDVPNR 318 Query: 190 TQAAM 194 QA++ Sbjct: 319 LQASL 323 >UniRef50_B5IMZ0 DNA-binding response regulator n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IMZ0_9CHRO Length = 291 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 18/206 (8%) Query: 4 VMFDRQSIFIHGMKISLQQRIPGVSIQGA--------SQADELWQKLESYPEALVMLDGD 55 ++ +R+ + G ++SL + G Q A S+ EL ++L P+ LV+ D Sbjct: 78 LLKNRRMVLCLGNRVSLGAFLAGSLAQDAVVGAATTASEGLELVERLS--PDLLVVSDAL 135 Query: 56 QDGEFCYWLLQKTVVQFPEVKVLITATDCNKRW--LQEVIHFNVLAIVPRDSTVETFALA 113 + G LL + VL+ + + +RW LQE + ++V + LA Sbjct: 136 EQGNGIDLLLTLKARRPQLATVLLVSRE--QRWHRLQEAVAAGCESLVAESRFGQGCGLA 193 Query: 114 -VNSAAMGMMFLPGDWRTTPE---KDIKDLKSLSARQREILTMLAAGESNKEIGRALNIS 169 V + G +++ RT + ++ + L+ L+ R+ E+L +A G SN EI +L +S Sbjct: 194 AVQAVCCGGVYIDQTLRTVVQGIPQNQRPLEPLTPRELEVLAQVARGCSNVEIAGSLYLS 253 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMM 195 TVK HL+++ R+L ++R AA++ Sbjct: 254 VDTVKTHLQNVLRKLPARDRAHAAVL 279 >UniRef50_Q28MQ9 Transcriptional regulator, LuxR family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28MQ9_JANSC Length = 292 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 27/63 (42%), Positives = 45/63 (71%), Gaps = 2/63 (3%) Query: 132 PEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQ 191 P KDI +L+ RQ++IL ++ G +N++I RA++IS GTVK H+ ++ +R +NRT+ Sbjct: 221 PHKDIS--ATLTPRQQDILGHVSRGATNRDIARAMDISEGTVKLHISAILKRTGAQNRTE 278 Query: 192 AAM 194 AA+ Sbjct: 279 AAL 281 >UniRef50_D1BJZ8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BJZ8_SANKS Length = 219 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%) Query: 111 ALAVNSAAMGMMFLPGDWR--------TTPEKDIKDLKSLSARQREILTMLAAGESNKEI 162 AL + AA G++ P R E ++ L SL+ R+R++L LA G SN +I Sbjct: 113 ALVRSVAAGGVVLSPAASRRIVEHHLGCADEAAVRRLTSLTCRERQVLAHLATGASNVQI 172 Query: 163 GRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLN 197 G AL++S GTVK H+ ++ +L V +R +AA++ + Sbjct: 173 GAALHLSRGTVKDHVSAILAKLGVASRLEAALVAD 207 >UniRef50_B5JP13 Sigma-70, region 4 family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JP13_9BACT Length = 211 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 65/124 (52%), Gaps = 6/124 (4%) Query: 73 PEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFL-PGDWR-- 129 PE KV++ + ++ + V +V ++S++E+ A+ G ++ P ++ Sbjct: 73 PECKVILVSAHFTPEIVKNTVERGVNGLVTKNSSIESLKDAIGQILKGAVYYSPEAYKLL 132 Query: 130 --TTPEKDIKD-LKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEV 186 KD D LK L+ R+ ++L M+ G S+KEI R+ N+S T+ AH ++ R+L + Sbjct: 133 RQPITNKDYNDSLKMLTPRETDVLQMVGEGYSSKEIARSFNLSVRTIDAHRSNIMRKLNL 192 Query: 187 KNRT 190 + T Sbjct: 193 RGAT 196 >UniRef50_B9PAD6 Predicted protein n=33 Tax=cellular organisms RepID=B9PAD6_POPTR Length = 326 Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 47/199 (23%), Positives = 94/199 (47%), Gaps = 13/199 (6%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADE--------LWQKLESYPEALVMLD 53 ++++ D ++ GM++ L + PG+ + G +AD+ + P+ LV+ D Sbjct: 116 RVLLIDDHALVRDGMRMHLTLQ-PGLEVVG--EADDGEAALAWLAAAEAGRMPD-LVITD 171 Query: 54 GDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALA 113 G L ++PE+ VLI + N ++++ I V +D+ + A Sbjct: 172 IGMRGMGGIALAGALHDRYPELAVLIVSMHDNLEYVRQAIRAGARGYVLKDAPADELLAA 231 Query: 114 VNSAAMGMMFLPGD-WRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 + + G +F R + + L +L+ R+R+IL + G++NK+I L +S T Sbjct: 232 IQAVLAGRVFYSARIARGMAAQAVSPLDALTPRERDILHGIGRGQANKDIAVQLGVSVRT 291 Query: 173 VKAHLESLYRRLEVKNRTQ 191 V+ H +L R+L ++ R + Sbjct: 292 VETHRLNLKRKLGIEGRAE 310 >UniRef50_Q08VW7 Response regulator n=2 Tax=Cystobacterineae RepID=Q08VW7_STIAU Length = 223 Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 5/88 (5%) Query: 113 AVNSAAMGMMFLPGDW-----RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALN 167 AV A G P D + D ++ L+ RQ E+L ++ G N +I LN Sbjct: 124 AVTRVAQGESMRPLDLFSARVEVSEAVDATGVRLLTPRQFEVLRYISTGADNLKIAACLN 183 Query: 168 ISTGTVKAHLESLYRRLEVKNRTQAAMM 195 I+ TVKAH+ S+Y++L+V+NRTQ AM+ Sbjct: 184 ITERTVKAHITSIYQKLKVENRTQMAML 211 >UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax=Bacillales RepID=DEGU_BREBE Length = 236 Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 48/216 (22%), Positives = 95/216 (43%), Gaps = 22/216 (10%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +QIV+ D +F G+K L + + + +E Y ++++D + Sbjct: 10 IQIVIIDDHQLFREGVKRILAMEPEFEVVADGEDGENAVELVEKYNPDVILMDINMPKVN 69 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + ++P+VKVL+ + ++ ++ V+ + ++ + AV A G Sbjct: 70 GVEATRDLIQRYPDVKVLVLSIHDDESYVTHVLKTGASGYLLKEMDADALIEAVKVVAQG 129 Query: 121 MMF--------LPGDWRTTPEKD--------------IKDLKSLSARQREILTMLAAGES 158 + L ++R +D K L L+ R+ E+L ++ G S Sbjct: 130 GAYIHPKVTHNLIKEYRRLVNEDEQESSEIGFKEVEYRKPLHILTRRECEVLQLMTDGYS 189 Query: 159 NKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAM 194 N+ IG AL IS TVK H+ ++ +++ V +RTQA + Sbjct: 190 NRMIGEALYISEKTVKNHVSNILQKMNVNDRTQAVV 225 >UniRef50_D1TNL2 Response regulator receiver protein n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TNL2_9BURK Length = 227 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 24/213 (11%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELW----QKLESYPEALVMLDGDQ 56 M I++ D ++F G+++ L Q PG + A + + Q+ + L + D Sbjct: 1 MNIMLVDDHALFREGLRLVLTQLDPGTEVIEAENCSQAFAIARQRTDLDLVLLDLSLPDM 60 Query: 57 DGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS 116 G L++ +Q+ + V++ + ++ + E + + +P+ ST A+ Sbjct: 61 SG---MEALRQMRIQYAGLPVVVLSARDDRTTIIEALDAGAMGFIPKSSTSRVMMSALQL 117 Query: 117 AAMGMMFLP------GDWRTTPEKDIKDL-----------KSLSARQREILTMLAAGESN 159 +++P D R + L K+L+ RQ ++L +L G+ Sbjct: 118 VLANGVYVPPAALTASDARRSATNAYARLDAAQHTPRLLDKALTERQMQVLELLVQGKPT 177 Query: 160 KEIGRALNISTGTVKAHLESLYRRLEVKNRTQA 192 K I R L ++ GT K H+ S+ R L V NRTQA Sbjct: 178 KLICRELGLAEGTAKVHIASVLRALRVANRTQA 210 >UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXM6_EIKCO Length = 215 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/198 (23%), Positives = 93/198 (46%), Gaps = 4/198 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D +F G+ L Q + A+ E + + LV+LD + Sbjct: 6 IRILLVDDHPLFRRGLSFLLAQEYGFEIVAEATDGLEGVKLARFHRPDLVLLDVEMPVMN 65 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L + + P + VL+ + L++ + + +++ + A+ A G Sbjct: 66 GPEALAQMLDFQPGLPVLMLTISEDADNLKKCLELGARGYILKNADTDFLVEAIRQAVAG 125 Query: 121 MMFLPGDW----RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAH 176 + + ++ P + L SL+ R+R++L +A G SNK I R + +S TVKAH Sbjct: 126 QQTVSPEMNNAGQSIPPEHSAILDSLTQRERDVLRYVAGGISNKMIARRMFLSENTVKAH 185 Query: 177 LESLYRRLEVKNRTQAAM 194 +++++R+L + NR +AA+ Sbjct: 186 MQNIFRKLNIDNRVRAAV 203 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P37640 Putative HTH-type transcriptional regulator yhjB... 250 2e-65 UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC... 238 9e-62 UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR fa... 226 5e-58 UniRef50_A8MF72 Two component transcriptional regulator, LuxR fa... 225 6e-58 UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa... 224 1e-57 UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=... 223 3e-57 UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax... 223 3e-57 UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti... 222 6e-57 UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR fa... 219 6e-56 UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=... 219 6e-56 UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus... 218 8e-56 UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenel... 218 1e-55 UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=... 218 1e-55 UniRef50_B2A8K6 Two component transcriptional regulator, LuxR fa... 218 1e-55 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 217 1e-55 UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. ora... 217 2e-55 UniRef50_C8WSR5 Two component transcriptional regulator, LuxR fa... 216 3e-55 UniRef50_O07528 Uncharacterized transcriptional regulatory prote... 215 6e-55 UniRef50_B2SU06 Two-component system regulatory protein n=73 Tax... 214 1e-54 UniRef50_A1S7C5 Response regulator receiver protein n=5 Tax=Prot... 214 1e-54 UniRef50_B0RP06 Transcriptional regulator, LuxR family n=22 Tax=... 214 2e-54 UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR fa... 214 2e-54 UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillac... 214 2e-54 UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR fa... 213 2e-54 UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa... 213 2e-54 UniRef50_Q2W0D2 Response regulator containing a CheY-like receiv... 213 2e-54 UniRef50_B2J2N1 Two component transcriptional regulator, LuxR fa... 213 2e-54 UniRef50_P94439 Uncharacterized transcriptional regulatory prote... 212 4e-54 UniRef50_Q1QZ85 Two component transcriptional regulator, LuxR fa... 212 5e-54 UniRef50_A4J6C2 Two component transcriptional regulator, LuxR fa... 212 7e-54 UniRef50_B6INK4 Glycerol metabolism activator AgmR n=3 Tax=Rhodo... 212 8e-54 UniRef50_B8CLF7 Regulatory protein, LuxR:Response regulator rece... 211 9e-54 UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphy... 211 1e-53 UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR fa... 211 1e-53 UniRef50_A7NP18 Two component transcriptional regulator, LuxR fa... 211 1e-53 UniRef50_A9AZR3 Two component transcriptional regulator, LuxR fa... 211 1e-53 UniRef50_B1ZY58 Two component transcriptional regulator, LuxR fa... 211 2e-53 UniRef50_B5JFN7 Response regulator receiver domain protein n=1 T... 211 2e-53 UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacill... 211 2e-53 UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteri... 210 2e-53 UniRef50_B0C756 Two-component transcriptional regulator, LuxR fa... 210 2e-53 UniRef50_B4D808 Two component transcriptional regulator, LuxR fa... 210 2e-53 UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=P... 209 3e-53 UniRef50_C4ZEG3 Two-component response regulator (Extracellular ... 209 3e-53 UniRef50_C6CZA5 Two component transcriptional regulator, LuxR fa... 209 4e-53 UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=... 209 4e-53 UniRef50_Q1AST2 Two component transcriptional regulator, LuxR fa... 209 5e-53 UniRef50_B4D831 Two component transcriptional regulator, LuxR fa... 209 5e-53 UniRef50_C6D0G6 Two component transcriptional regulator, LuxR fa... 209 6e-53 UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR fa... 208 7e-53 UniRef50_Q4KHB4 DNA-binding response regulator, LuxR family n=3 ... 208 8e-53 UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR fa... 208 9e-53 UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 ... 208 1e-52 UniRef50_Q024A4 Two component transcriptional regulator, LuxR fa... 207 1e-52 UniRef50_A9B5L0 Two component transcriptional regulator, LuxR fa... 207 2e-52 UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut... 207 2e-52 UniRef50_A4TWP7 Response regulator containing a CheY-like receiv... 207 2e-52 UniRef50_A4VZN8 Response regulator containing a CheY-like receiv... 207 2e-52 UniRef50_B6IU89 Glycerol metabolism activator AgmR n=1 Tax=Rhodo... 206 3e-52 UniRef50_B9MPQ9 Two component transcriptional regulator, LuxR fa... 206 3e-52 UniRef50_B0C955 Two-component transcriptional regulator, LuxR fa... 206 3e-52 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 206 3e-52 UniRef50_A6TVR4 Two component transcriptional regulator, LuxR fa... 206 5e-52 UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Ta... 205 7e-52 UniRef50_B8FX94 Two component transcriptional regulator, LuxR fa... 205 7e-52 UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR fa... 205 8e-52 UniRef50_A4JJ97 Two component transcriptional regulator, LuxR fa... 205 8e-52 UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR fa... 205 1e-51 UniRef50_D1C1C8 Two component transcriptional regulator, LuxR fa... 204 1e-51 UniRef50_A5V148 Two component transcriptional regulator, LuxR fa... 204 1e-51 UniRef50_C1B8T3 NarL family two-component response regulator n=6... 204 1e-51 UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermop... 204 1e-51 UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ... 204 2e-51 UniRef50_A9AX03 Two component transcriptional regulator, LuxR fa... 204 2e-51 UniRef50_C0GHS5 Two component transcriptional regulator, LuxR fa... 204 2e-51 UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococc... 204 2e-51 UniRef50_B9QY19 Sigma-70, region 4 family n=2 Tax=Alphaproteobac... 203 2e-51 UniRef50_UPI00017468E1 two-component response regulator n=1 Tax=... 203 3e-51 UniRef50_C1TL62 Response regulator containing a CheY-like receiv... 203 3e-51 UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 T... 202 4e-51 UniRef50_UPI0001B502C9 two component LuxR family transcriptional... 202 4e-51 UniRef50_D1XHI5 Two component transcriptional regulator, LuxR fa... 202 5e-51 UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides... 202 7e-51 UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi... 202 7e-51 UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus... 202 8e-51 UniRef50_C5SBA1 Two component transcriptional regulator, LuxR fa... 201 9e-51 UniRef50_D1C3I4 Two component transcriptional regulator, LuxR fa... 201 1e-50 UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmic... 201 1e-50 UniRef50_Q5QVF9 Response regulator, LuxR family (CheY, HTH domai... 201 1e-50 UniRef50_C1I7X4 Two-component system response regulator n=1 Tax=... 200 2e-50 UniRef50_B8GUD1 Two component transcriptional regulator, LuxR fa... 200 2e-50 UniRef50_A6M052 Two component transcriptional regulator, LuxR fa... 200 3e-50 UniRef50_Q07YA8 Two component transcriptional regulator, LuxR fa... 200 3e-50 UniRef50_B3RA82 Response regulator protein; Response regulator r... 200 3e-50 UniRef50_Q7NN43 Two-component response regulator n=2 Tax=Gloeoba... 199 4e-50 UniRef50_UPI0001788591 two component transcriptional regulator, ... 199 4e-50 UniRef50_B1ZU87 Two component transcriptional regulator, LuxR fa... 199 5e-50 UniRef50_C5V3Z0 Two component transcriptional regulator, LuxR fa... 199 5e-50 UniRef50_A7NQF6 Two component transcriptional regulator, LuxR fa... 199 6e-50 UniRef50_A5V445 Two component transcriptional regulator, LuxR fa... 199 6e-50 UniRef50_Q2SQ58 Response regulator containing a CheY-like receiv... 199 7e-50 UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa... 198 8e-50 UniRef50_A4U0R2 DNA-binding response regulator, LuxR family n=1 ... 198 8e-50 UniRef50_B1KE04 Two component transcriptional regulator, LuxR fa... 198 1e-49 UniRef50_A3Y678 Response regulator n=1 Tax=Marinomonas sp. MED12... 197 1e-49 UniRef50_Q2W3K4 Response regulator n=2 Tax=Magnetospirillum RepI... 197 1e-49 UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexac... 197 1e-49 UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibac... 197 1e-49 UniRef50_C7MRK0 Response regulator containing a CheY-like receiv... 197 2e-49 UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator rece... 197 2e-49 UniRef50_A8L3K7 Two component transcriptional regulator, LuxR fa... 197 2e-49 UniRef50_A4YN74 Two-component transcriptional regulator, LuxR fa... 197 2e-49 UniRef50_A6TKJ8 Two component transcriptional regulator, LuxR fa... 197 2e-49 UniRef50_B9XL75 Two component transcriptional regulator, LuxR fa... 197 2e-49 UniRef50_C0GEE4 Two component transcriptional regulator, LuxR fa... 197 3e-49 UniRef50_Q0A822 Two component transcriptional regulator, LuxR fa... 196 3e-49 UniRef50_Q15NL1 Two component transcriptional regulator, LuxR fa... 196 3e-49 UniRef50_Q15UD9 Two component transcriptional regulator, LuxR fa... 196 3e-49 UniRef50_B4D5C2 Two component transcriptional regulator, LuxR fa... 196 3e-49 UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR fa... 196 3e-49 UniRef50_A9B4P1 Two component transcriptional regulator, LuxR fa... 196 3e-49 UniRef50_D2SFS4 Two component transcriptional regulator, LuxR fa... 195 5e-49 UniRef50_B4DBM9 Two component transcriptional regulator, LuxR fa... 195 5e-49 UniRef50_B5JPJ0 Sigma-70, region 4 family n=3 Tax=Verrucomicrobi... 195 5e-49 UniRef50_D1CI66 Two component transcriptional regulator, LuxR fa... 195 6e-49 UniRef50_C5SGD8 Two component transcriptional regulator, LuxR fa... 195 6e-49 UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa... 195 6e-49 UniRef50_Q0FFK6 DNA-binding response regulator, LuxR family prot... 195 7e-49 UniRef50_B1L0K3 DNA-binding response regulator, LuxR family n=22... 195 7e-49 UniRef50_B2A7N5 Two component transcriptional regulator, LuxR fa... 195 7e-49 UniRef50_Q1ZGB3 Nitrate/nitrite response regulator protein NarP ... 195 7e-49 UniRef50_Q2W650 Response regulator containing a CheY-like receiv... 195 7e-49 UniRef50_C6P401 Two component transcriptional regulator, LuxR fa... 195 8e-49 UniRef50_C1F7G9 Two-component response regulator n=1 Tax=Acidoba... 195 8e-49 UniRef50_C1A730 NarL family two-component response regulator n=1... 195 8e-49 UniRef50_A4TWP9 Response regulator containing a CheY-like receiv... 195 9e-49 UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas fl... 195 9e-49 UniRef50_Q1GI23 Two component transcriptional regulator, LuxR fa... 194 1e-48 UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax... 194 1e-48 UniRef50_Q67JS2 Two-component response regulator n=1 Tax=Symbiob... 194 1e-48 UniRef50_A3WDJ9 Two-component response regulator n=1 Tax=Erythro... 194 1e-48 UniRef50_C1XS11 Response regulator containing a CheY-like receiv... 194 1e-48 UniRef50_B5IX99 Response regulator receiver domain protein n=2 T... 194 2e-48 UniRef50_C6QEY3 Two component transcriptional regulator, LuxR fa... 194 2e-48 UniRef50_B0UJT9 Two component transcriptional regulator, LuxR fa... 194 2e-48 UniRef50_A0NNP3 Response regulator containing a CheY-like receiv... 194 2e-48 UniRef50_Q3SFT3 Two Component Transcriptional Regulator, LuxR fa... 194 2e-48 UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Synt... 194 2e-48 UniRef50_Q3SG39 Two Component Transcriptional Regulator, LuxR fa... 194 2e-48 UniRef50_A4BEK3 Putative transcriptional regulator, LuxR family ... 194 2e-48 UniRef50_Q1YMP2 Two component response regulator n=1 Tax=Auranti... 193 3e-48 UniRef50_A1AXR1 Two component transcriptional regulator, LuxR fa... 193 3e-48 UniRef50_C4RMY6 Two-component system response regulator n=5 Tax=... 193 4e-48 UniRef50_C5CKC0 Two component transcriptional regulator, LuxR fa... 193 4e-48 UniRef50_UPI000050F8A6 two component transcriptional regulator, ... 192 4e-48 UniRef50_D1VBH1 Two component transcriptional regulator, LuxR fa... 192 5e-48 UniRef50_A6UGI4 Two component transcriptional regulator, LuxR fa... 192 5e-48 UniRef50_B8G137 Two component transcriptional regulator, LuxR fa... 192 6e-48 UniRef50_Q04VJ6 Receiver component of a two-component response r... 192 6e-48 UniRef50_A6SW03 DNA-binding response regulator, LuxR family n=1 ... 192 6e-48 UniRef50_B8EIF2 Two component transcriptional regulator, LuxR fa... 192 6e-48 UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa... 192 6e-48 UniRef50_B9YZJ3 Two component transcriptional regulator, LuxR fa... 192 6e-48 UniRef50_Q5WJ71 Two-component response regulator n=5 Tax=Bacilla... 192 7e-48 UniRef50_A6TNJ5 Two component transcriptional regulator, LuxR fa... 192 8e-48 UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa... 192 8e-48 UniRef50_C6W2Z0 Two component transcriptional regulator, LuxR fa... 192 8e-48 UniRef50_Q48AG6 DNA-binding response regulator, LuxR family n=4 ... 191 1e-47 UniRef50_D0CQV3 Transcriptional regulatory protein DegU n=1 Tax=... 191 1e-47 UniRef50_A1RC88 Two-component system response regulator n=8 Tax=... 191 1e-47 UniRef50_C5EHQ3 Two-component protein Kinase n=4 Tax=Clostridial... 190 1e-47 UniRef50_A3JWJ3 Two component transcriptional regulator, LuxR fa... 190 2e-47 UniRef50_Q0AL13 Two component transcriptional regulator, LuxR fa... 190 2e-47 UniRef50_B4SJL0 Two component transcriptional regulator, LuxR fa... 190 2e-47 UniRef50_D1Y4N4 Two component transcriptional regulator, LuxR fa... 190 2e-47 UniRef50_B9PAD6 Predicted protein n=33 Tax=cellular organisms Re... 190 2e-47 UniRef50_A3VS17 Putative two-component response regulator protei... 190 2e-47 UniRef50_C4ZM15 Two component transcriptional regulator, LuxR fa... 190 2e-47 UniRef50_A7HS72 Two component transcriptional regulator, LuxR fa... 190 2e-47 UniRef50_UPI0000E116E2 Response regulator, LuxR family (CheY, HT... 190 3e-47 Sequences not found previously or not previously below threshold: UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 215 8e-55 UniRef50_A0LVS2 Two component transcriptional regulator, LuxR fa... 213 3e-54 UniRef50_B4CWX5 Two component transcriptional regulator, LuxR fa... 211 9e-54 UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteri... 211 9e-54 UniRef50_B2J8J5 Two component transcriptional regulator, LuxR fa... 207 2e-52 UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR fa... 206 3e-52 UniRef50_D1AAU8 Two component transcriptional regulator, LuxR fa... 206 4e-52 UniRef50_A1SKW0 Two component transcriptional regulator, LuxR fa... 205 9e-52 UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Ac... 204 2e-51 UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR fa... 203 3e-51 UniRef50_C4RJG1 Two-component system response regulator receiver... 202 4e-51 UniRef50_C3AL44 Response regulator receiver n=3 Tax=Bacillus Rep... 202 5e-51 UniRef50_P55184 Uncharacterized transcriptional regulatory prote... 201 1e-50 UniRef50_C7MUJ2 Response regulator containing a CheY-like receiv... 200 3e-50 UniRef50_A5URU4 Two component transcriptional regulator, LuxR fa... 200 3e-50 UniRef50_C7R398 Two component transcriptional regulator, LuxR fa... 199 3e-50 UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas... 199 4e-50 UniRef50_UPI0001789139 two component transcriptional regulator, ... 199 4e-50 UniRef50_A3CKH3 Two-component system transcriptional regulator (... 199 5e-50 UniRef50_C7MN84 Response regulator containing a CheY-like receiv... 199 5e-50 UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V... 199 7e-50 UniRef50_C0GJ72 Two component transcriptional regulator, LuxR fa... 198 7e-50 UniRef50_B9XAM6 Two component transcriptional regulator, LuxR fa... 198 7e-50 UniRef50_Q027R2 Two component transcriptional regulator, LuxR fa... 198 7e-50 UniRef50_C6BTX3 Two component transcriptional regulator, LuxR fa... 198 9e-50 UniRef50_C5T9P3 Two component transcriptional regulator, LuxR fa... 198 1e-49 UniRef50_C5B7B5 Nitrate/nitrite response regulator protein NarP ... 198 1e-49 UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 T... 197 2e-49 UniRef50_D1C6S1 Two component transcriptional regulator, LuxR fa... 197 2e-49 UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=... 197 2e-49 UniRef50_UPI00018507A5 two component LuxR family transcriptional... 197 2e-49 UniRef50_Q21KE6 Transcriptional regulator, XRE family n=2 Tax=Pr... 197 2e-49 UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomyceta... 197 2e-49 UniRef50_A3Y699 Putative two component system response regulator... 197 3e-49 UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 ... 196 3e-49 UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsoni... 196 4e-49 UniRef50_D1CF52 Two component transcriptional regulator, LuxR fa... 196 4e-49 UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 ... 196 4e-49 UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Act... 196 4e-49 UniRef50_A6TUG7 Two component transcriptional regulator, LuxR fa... 195 5e-49 UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa... 195 6e-49 UniRef50_B8FDP3 Two component transcriptional regulator, LuxR fa... 195 6e-49 UniRef50_UPI0001789C57 two component transcriptional regulator, ... 195 7e-49 UniRef50_Q024Y7 Two component transcriptional regulator, LuxR fa... 195 8e-49 UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR fa... 195 1e-48 UniRef50_D1BX47 Two component transcriptional regulator, LuxR fa... 195 1e-48 UniRef50_B4CV47 Two component transcriptional regulator, LuxR fa... 194 1e-48 UniRef50_Q1IK52 Two component transcriptional regulator, LuxR fa... 194 1e-48 UniRef50_B4D2I0 Two component transcriptional regulator, LuxR fa... 194 2e-48 UniRef50_C1A9U5 NarL family two-component response regulator n=1... 194 2e-48 UniRef50_A1VT42 Two component transcriptional regulator, LuxR fa... 194 2e-48 UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistip... 194 2e-48 UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiob... 193 2e-48 UniRef50_D0LYS4 Two component transcriptional regulator, LuxR fa... 192 5e-48 UniRef50_Q73CG3 DNA-binding response regulator, LuxR family n=10... 192 6e-48 UniRef50_C7RBI1 Two component transcriptional regulator, LuxR fa... 192 7e-48 UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa... 192 8e-48 UniRef50_D1B9T1 Two component transcriptional regulator, LuxR fa... 192 9e-48 UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 ... 192 9e-48 UniRef50_D1BGN7 Response regulator containing a CheY-like receiv... 191 1e-47 UniRef50_C4KQQ0 Transcriptional regulatory protein DegU (Proteas... 191 1e-47 UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr... 191 1e-47 UniRef50_C4DCK3 Response regulator containing a CheY-like receiv... 191 1e-47 UniRef50_P31802 Nitrate/nitrite response regulator protein narP ... 191 1e-47 UniRef50_C1YGP4 Response regulator containing a CheY-like receiv... 190 2e-47 UniRef50_UPI0001C314AF two component transcriptional regulator, ... 190 2e-47 UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, ... 190 2e-47 UniRef50_A0RGC1 DNA-binding response regulator n=12 Tax=Bacillal... 190 2e-47 UniRef50_Q11YW8 Two component transcriptional regulator, LuxR fa... 190 2e-47 UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa... 190 2e-47 >UniRef50_P37640 Putative HTH-type transcriptional regulator yhjB n=98 Tax=Bacteria RepID=YHJB_ECOLI Length = 200 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 200/200 (100%), Positives = 200/200 (100%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF Sbjct: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG Sbjct: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL Sbjct: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 Query: 181 YRRLEVKNRTQAAMMLNISS 200 YRRLEVKNRTQAAMMLNISS Sbjct: 181 YRRLEVKNRTQAAMMLNISS 200 >UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30 Tax=Bacillales RepID=B7GL14_ANOFW Length = 260 Score = 238 bits (608), Expect = 9e-62, Method: Composition-based stats. Identities = 50/214 (23%), Positives = 94/214 (43%), Gaps = 19/214 (8%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 +IV+ D +F G+K L + S DE +E Y +V++D + Sbjct: 38 RIVLIDDHKLFREGIKRILDFEQDFEVVAEGSDGDEALALVERYKPDVVIMDINMPHVNG 97 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 ++ + +P+ KV+I + ++ ++ + + + ++ + AV A G Sbjct: 98 VEATRQLIEAYPDTKVIILSIHDDESYVMHALQTGAMGYLLKEMDADALIEAVRVVAEGG 157 Query: 122 MFLPGDWRTTPEKDIKDLKS-------------------LSARQREILTMLAAGESNKEI 162 +L K+ + L + L+ R+ E+L +LA G+SNK I Sbjct: 158 SYLHPKVTHNLVKEYRRLVAGEGGGKEKQNQDVCRPYHLLTRRECEVLQLLADGKSNKGI 217 Query: 163 GRALNISTGTVKAHLESLYRRLEVKNRTQAAMML 196 AL IS TVK H+ ++ ++L V +RTQA ++ Sbjct: 218 ADALYISEKTVKNHVSNILQKLNVNDRTQAVVVA 251 >UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR family n=3 Tax=Clostridia RepID=Q2RJU9_MOOTA Length = 222 Score = 226 bits (576), Expect = 5e-58, Method: Composition-based stats. Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 9/205 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + I++ D S+ G++ L+ + A+ E + Y ++++D + G Sbjct: 7 ITILIADDHSLVREGIRKILELEPDLQVVGEAATGQEAIEMTRRYQPQVIIMDINMPGLN 66 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + ++P++ +L ++ ++ E++ V V +D + E AV A G Sbjct: 67 GIEATKVIRQEWPQIAILALTIHDDEEYIIELLRSGVSGYVLKDISAEELVQAVYQVARG 126 Query: 121 MMFLPGDW---------RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTG 171 + + P L+AR+REIL ++ G+SN+EI R L IS Sbjct: 127 ARVIHPGVAQKVIGCIQKQKPFTPAPVSIPLTAREREILIHVSLGKSNREIARELFISEK 186 Query: 172 TVKAHLESLYRRLEVKNRTQAAMML 196 TVK HL ++ ++ V +RTQAA+ Sbjct: 187 TVKNHLTHIFHKIGVSDRTQAALYA 211 >UniRef50_A8MF72 Two component transcriptional regulator, LuxR family n=14 Tax=Clostridia RepID=A8MF72_ALKOO Length = 224 Score = 225 bits (575), Expect = 6e-58, Method: Composition-based stats. Identities = 48/206 (23%), Positives = 96/206 (46%), Gaps = 10/206 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + +++ D ++ G+K ++ I A+ +E K + +V+LD + Sbjct: 11 INVLIADDHALVRQGLKQIIELEPDIKVIGLAADGEEAVLKTQQLSPDVVLLDISMPKQN 70 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L++ +K+++ ++ +L E I+ V +D+ E+ A+ G Sbjct: 71 GIQTLRRLKDMDSTIKIIMLTFHEDREYLFETINLGANGYVLKDAESESLIKAIRDVYQG 130 Query: 121 MMFLPGDWRTTPEKDIKDLK----------SLSARQREILTMLAAGESNKEIGRALNIST 170 + ++ T K+ + L+ R+ E+LT+LA G +NKEIG L IS Sbjct: 131 LNYIYPTLATELVKEFNRREVKSQKRNNEDELTRREYEVLTLLAEGINNKEIGDCLFISE 190 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 TVK H+ ++++++ V +RTQAA+ Sbjct: 191 KTVKNHVSNIFKKINVNDRTQAAIYA 216 >UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH Length = 211 Score = 224 bits (572), Expect = 1e-57, Method: Composition-based stats. Identities = 49/198 (24%), Positives = 90/198 (45%), Gaps = 3/198 (1%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 ++++ D + G+ L+ + A E + + + LV+LD + Sbjct: 5 KVLVADDHDLVREGICKLLELYEDIKVVGEAGDGLETVKGVRDHFPDLVLLDLNMPRMGG 64 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 ++K P +KVLI + ++ EVI + +D E A++ G Sbjct: 65 ITAIKKIKEISPGIKVLILTIHDEEEYVYEVIRSGAEGYIQKDVKPEELKRAIDKVIKGD 124 Query: 122 MFLPGDWRTTPEK---DIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLE 178 P + + ++ LS+R++E+L +LA G SNK+I + L IS TVK H+ Sbjct: 125 KVFPRSTENEVREVVNEKYEVCELSSREQEVLELLAQGMSNKQIAQELFISEKTVKNHVS 184 Query: 179 SLYRRLEVKNRTQAAMML 196 ++ R+L V +RTQA ++ Sbjct: 185 NILRKLSVNDRTQAVIVA 202 >UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0H3_THERP Length = 245 Score = 223 bits (569), Expect = 3e-57, Method: Composition-based stats. Identities = 53/213 (24%), Positives = 88/213 (41%), Gaps = 17/213 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + I++ D +F G++ SL+Q V + A+ E + + ++++D G Sbjct: 4 INILIVDDHPLFRSGIRWSLEQNPQFVIVGEAADGSEALRLADELSPDVILVDLSLPGMN 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + + P+ V+I + L I A +D E + A G Sbjct: 64 GLEVARALKRRQPQAGVIILTMHQDDEQLFNAIRAGASAYCTKDIEPEQLIDVITRVARG 123 Query: 121 MMFLPGDWRTTPEKDIKDL-----------------KSLSARQREILTMLAAGESNKEIG 163 + + P + L L+ R+ EIL +A G SNKEI Sbjct: 124 EYLINEMVLSRPFVASRVLDQFRELSRLDRTSSGFFSPLTPREIEILDCVARGYSNKEIA 183 Query: 164 RALNISTGTVKAHLESLYRRLEVKNRTQAAMML 196 +ALNIS TVK H+ S+ R+L V +RTQA + Sbjct: 184 QALNISDQTVKNHITSILRKLAVNDRTQAVIYA 216 >UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax=Bacillales RepID=DEGU_BREBE Length = 236 Score = 223 bits (569), Expect = 3e-57, Method: Composition-based stats. Identities = 47/216 (21%), Positives = 95/216 (43%), Gaps = 22/216 (10%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +QIV+ D +F G+K L + + + +E Y ++++D + Sbjct: 10 IQIVIIDDHQLFREGVKRILAMEPEFEVVADGEDGENAVELVEKYNPDVILMDINMPKVN 69 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + ++P+VKVL+ + ++ ++ V+ + ++ + AV A G Sbjct: 70 GVEATRDLIQRYPDVKVLVLSIHDDESYVTHVLKTGASGYLLKEMDADALIEAVKVVAQG 129 Query: 121 MMFLPG--------DWRTTPEKDI--------------KDLKSLSARQREILTMLAAGES 158 ++ ++R +D K L L+ R+ E+L ++ G S Sbjct: 130 GAYIHPKVTHNLIKEYRRLVNEDEQESSEIGFKEVEYRKPLHILTRRECEVLQLMTDGYS 189 Query: 159 NKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAM 194 N+ IG AL IS TVK H+ ++ +++ V +RTQA + Sbjct: 190 NRMIGEALYISEKTVKNHVSNILQKMNVNDRTQAVV 225 >UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales RepID=D2BDI1_STRRD Length = 227 Score = 222 bits (567), Expect = 6e-57, Method: Composition-based stats. Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 6/205 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + HG++ L+Q + A +E + S +V++D G Sbjct: 19 IRVLLVDDHPLLRHGLRALLEQVGGAEVVGEAGDGEEAIALVLSLNPDVVVMDLVMPGVT 78 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + + P++ VL+ + + + V + + F AV + A G Sbjct: 79 GIEATRTLIDRRPDLGVLVLTMSEDDASVFAALRAGARGYVLKGADGNDFIAAVRAVARG 138 Query: 121 MMFLPGDWRTTPEK------DIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVK 174 + + L+ R+REIL +LA+G+SN EI R L +S TVK Sbjct: 139 EAVYGPAVARRIRRFLTTGPESGPFPELTQREREILDLLASGKSNAEIARRLFLSQKTVK 198 Query: 175 AHLESLYRRLEVKNRTQAAMMLNIS 199 HL S++ +L+V +RTQA + + Sbjct: 199 NHLTSIFAKLQVADRTQAVVRARRA 223 >UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=Q1AVR6_RUBXD Length = 220 Score = 219 bits (558), Expect = 6e-56, Method: Composition-based stats. Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 11/207 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ + Q++ G++ L + A+ E ++L +V++D Sbjct: 5 VRVMIVEDQALMREGLRTLLDLEEGVEVVGEAADGVEALERLPGARPEVVLVDVRMPRMD 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L+++ + PEV +I T + ++ + + +D+ E A A+ G Sbjct: 65 GIQLIERLGREHPEVAAIILTTFDDDEYVFRGLRAGARGYILKDTPSEELAAAIEKVHRG 124 Query: 121 MMFLP-----------GDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIS 169 L G P LS R+ E+L ++A+G SN+EI RAL I+ Sbjct: 125 EAVLDGPITLKVISELGRLSKGPAGPQPGSGGLSEREMEVLRLVASGASNREIARALYIT 184 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMML 196 GTVK H+ S+ R+L ++RTQAA+ Sbjct: 185 EGTVKNHISSILRKLGFRDRTQAALYA 211 >UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=Thermomicrobia (class) RepID=B9L2G4_THERP Length = 246 Score = 219 bits (558), Expect = 6e-56, Method: Composition-based stats. Identities = 44/204 (21%), Positives = 97/204 (47%), Gaps = 8/204 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D +F G++ ++ + A+ + + + +V++D + G Sbjct: 28 IRVLIVDDHDLFREGLRQLIETDPAIEVVGEAANGQDALKMVAELQPDVVLMDINMPGMD 87 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + V Q+ V VL+ ++ ++ I + + ++S E A++ AA G Sbjct: 88 GIRATEAIVQQYRHVHVLMLTMYDDEEYVLHAIRAGARSYLVKNSKPEELLRAIHVAAEG 147 Query: 121 MMFLPGDWRTTPEKDIKDL--------KSLSARQREILTMLAAGESNKEIGRALNISTGT 172 + D ++ + L + LS R+ +L +LA G +N++I ALN++ T Sbjct: 148 GATIDPDLAPILMREYQRLLTKAPTRGQDLSDRELTMLRLLAQGYNNRQIADALNLAEST 207 Query: 173 VKAHLESLYRRLEVKNRTQAAMML 196 VK +L +L+++L V++RTQA + Sbjct: 208 VKNNLSALFQKLGVRDRTQAVIYA 231 >UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus RepID=A0R9S0_BACAH Length = 216 Score = 218 bits (557), Expect = 8e-56, Method: Composition-based stats. Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 7/203 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D + ++ L+ + AS D + +K+E+ +++D + G+ Sbjct: 5 IKILVVDDHAFLRDAIRSILEDESDMNVVGEASSGDGVLEKVEACRPDCILMDINLPGKN 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + +P +VL+ + +L + + + +DS+ E A+ G Sbjct: 65 GIEATELVKKNYPNCRVLVFTMYEHDEYLMDALQAGADGYLLKDSSSEQVVAAIRMLYRG 124 Query: 121 MMFLPG-------DWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 + + K + L+ R++EIL L G SNKEI AL IS TV Sbjct: 125 DSVIHPRMTKKLITYHQQKMKVESNENELTEREKEILFELVKGLSNKEIAEALYISDKTV 184 Query: 174 KAHLESLYRRLEVKNRTQAAMML 196 K H+ ++++L VK+R+QA + Sbjct: 185 KIHINKIFKKLNVKSRSQAVIYA 207 >UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXM6_EIKCO Length = 215 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 46/202 (22%), Positives = 93/202 (46%), Gaps = 4/202 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D +F G+ L Q + A+ E + + LV+LD + Sbjct: 6 IRILLVDDHPLFRRGLSFLLAQEYGFEIVAEATDGLEGVKLARFHRPDLVLLDVEMPVMN 65 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L + + P + VL+ + L++ + + +++ + A+ A G Sbjct: 66 GPEALAQMLDFQPGLPVLMLTISEDADNLKKCLELGARGYILKNADTDFLVEAIRQAVAG 125 Query: 121 MMFLPGDW----RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAH 176 + + ++ P + L SL+ R+R++L +A G SNK I R + +S TVKAH Sbjct: 126 QQTVSPEMNNAGQSIPPEHSAILDSLTQRERDVLRYVAGGISNKMIARRMFLSENTVKAH 185 Query: 177 LESLYRRLEVKNRTQAAMMLNI 198 +++++R+L + NR +AA+ Sbjct: 186 MQNIFRKLNIDNRVRAAVYARE 207 >UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=Bacteria RepID=B4VFW8_9ACTO Length = 216 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 48/202 (23%), Positives = 91/202 (45%), Gaps = 6/202 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G++ L+ + + AS +E + E ++++D G Sbjct: 8 VRVLLVDDHQVVRRGLRTFLEVQEDIEVVGEASDGEEGIARAEELRPDVILMDIKMPGTD 67 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L++ +VLI + +R + + V +D + A A+ S G Sbjct: 68 GIEALRRLRELANPARVLIVTSFTEQRTVVPALRAGAAGYVYKDIDPDALAGAIRSVHAG 127 Query: 121 MMFLPGDWRTTPEKDIKDLKS------LSARQREILTMLAAGESNKEIGRALNISTGTVK 174 + L + S L+ R+RE+L+ +A G SN+EI RAL +S TVK Sbjct: 128 HVLLQPEVAVALLTQDDQGPSSSRGGALTDREREVLSHIADGRSNREIARALVLSEKTVK 187 Query: 175 AHLESLYRRLEVKNRTQAAMML 196 H+ ++ +L+V +RTQAA+ Sbjct: 188 THVSNILMKLDVADRTQAALWA 209 >UniRef50_B2A8K6 Two component transcriptional regulator, LuxR family n=9 Tax=Clostridia RepID=B2A8K6_NATTJ Length = 228 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 48/209 (22%), Positives = 96/209 (45%), Gaps = 15/209 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D ++F G+K L A +E+ K++ ++++D + Sbjct: 10 IRILLADDHALFRQGLKKILDMEEDLAVCGEAQNGEEVVDKVKLLKPNIILMDINMPLLN 69 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + PE KV+ ++ +L E++ + +D T A+ G Sbjct: 70 GVEATKYVKEVSPETKVIALTIHEDEEYLFEIVKEGAAGFLLKDVETPTLVQAIQEVNKG 129 Query: 121 MMFLP--------GDWRTTPEKDIKDLKS-------LSARQREILTMLAAGESNKEIGRA 165 F+ G++ + +++KS L+ R++EIL ++A G +NKEI + Sbjct: 130 NSFIHPTITHKLLGEFNRLAQNSPRNIKSDEAVQSELTGREKEILELMAQGYTNKEISKE 189 Query: 166 LNISTGTVKAHLESLYRRLEVKNRTQAAM 194 L IS TVK H+ ++ R+++V +RTQA + Sbjct: 190 LYISEKTVKNHVSNILRKMDVTDRTQAVI 218 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 217 bits (555), Expect = 1e-55, Method: Composition-based stats. Identities = 52/197 (26%), Positives = 96/197 (48%), Gaps = 1/197 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D I G+K L + + A DE + ++ +V+LD + G Sbjct: 5 IRVLVADDHPIVRQGLKTFLDIQPDLSVVAEARDGDEALALIAAHEPDVVLLDLNMPGSD 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +L + KV++ + + E + + +D ++ A A+ S A G Sbjct: 65 GAKVLTRLAASDHRAKVIVLTSVTEAVRVTEAVAAGAAGFLYKDIDPDSLAQAIRSVADG 124 Query: 121 MMFLPGDWRTTPEKDIK-DLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLES 179 + + T + +L+AR+RE+L ++AAG SN+EI + L+++ TVK HL S Sbjct: 125 QVIFAREAVTAMTAPAPGPVAALTAREREVLALVAAGRSNREIAKQLSVAEKTVKTHLSS 184 Query: 180 LYRRLEVKNRTQAAMML 196 L+R+L V +RTQAA+ Sbjct: 185 LFRKLGVADRTQAALYA 201 >UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7D2_9BACL Length = 227 Score = 217 bits (553), Expect = 2e-55, Method: Composition-based stats. Identities = 46/207 (22%), Positives = 97/207 (46%), Gaps = 10/207 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLE----SYPEALVMLDGDQ 56 +++++ D + G+K L Q I A E + LE ++++D Sbjct: 13 IKVMIVDDHDMVRMGLKTYLMQDPGFEVIAEAGDGREAVELLERGLREGQPDIILMDLMM 72 Query: 57 DGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS 116 G ++ +FP++K++I + + + + ++ V + + E A+ Sbjct: 73 PGMNGAEATKEVRSRFPDMKIVILTSFLEDDLVVQAVEAGAVSYVLKTVSAEELIYALQG 132 Query: 117 AAMGMMFLPGDWRTTPEKDIK------DLKSLSARQREILTMLAAGESNKEIGRALNIST 170 A GM + G+ + ++ D ++ R++E+L ++A G+SNK+I L+IS Sbjct: 133 AYRGMPVMTGEVAQALTRGLRQRTVQGDDSGMTEREKEVLLLIAEGKSNKDIAEELHISI 192 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMMLN 197 TVK H+ +L + E+++RTQ A+ + Sbjct: 193 KTVKTHVSNLLMKCELEDRTQLAIYAH 219 >UniRef50_C8WSR5 Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSR5_ALIAD Length = 231 Score = 216 bits (552), Expect = 3e-55, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 80/207 (38%), Gaps = 11/207 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D +F G+ L+ + A E + ++ + +LD Sbjct: 10 IKVLVVDDHELFRRGVVTVLRSTPGIYVVGEAGNGREAIECFQTLQPDVTLLDIHMPVCN 69 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +K P K+L+ + L E + V + + E V G Sbjct: 70 GLETARKMREANPNTKILMLTVSETEEMLFEAVKSGASGYVLKSVSPERLIECVRQVYEG 129 Query: 121 MMFLPGDW-----------RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIS 169 +P T + + L+ R+RE+L L+AG SNKEI RAL IS Sbjct: 130 EPVVPSSLAMKMIAEFSRTAETRMPSSESVTELTEREREVLQYLSAGASNKEIARALFIS 189 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMML 196 TV+ H+ + +L + NR QAA Sbjct: 190 ENTVRNHVRHILDKLHLSNRAQAAAYA 216 >UniRef50_O07528 Uncharacterized transcriptional regulatory protein yhcZ n=3 Tax=Bacillus RepID=YHCZ_BACSU Length = 214 Score = 215 bits (549), Expect = 6e-55, Method: Composition-based stats. Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 9/204 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 M+IV+ D + G++ + + A+ E + +E LV++D Sbjct: 1 MKIVIADDHHVVRKGLRFFFATQDDIEVVGEAATGLEALRVIEETKPDLVLMDLSMPEMD 60 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++K + QFP+ +++ + ++ + + A +D+ E G Sbjct: 61 GIQAIKKAIQQFPDTNIIVLTSYSDQEHVIPALQAGAKAYQLKDTEPEELVKT-RQVHGG 119 Query: 121 MMFLPGDW--------RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 L + + + + L+ R++++LT +A G+SNKEI AL IS T Sbjct: 120 EYKLSTAIMPHVLTHMKNQHDPEKEKYYQLTRREKDVLTEIANGKSNKEIAAALFISEKT 179 Query: 173 VKAHLESLYRRLEVKNRTQAAMML 196 VK H+ +L +LEV +RTQAA+ Sbjct: 180 VKTHVSNLLAKLEVADRTQAALFA 203 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 215 bits (548), Expect = 8e-55, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 87/202 (43%), Gaps = 7/202 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + +++ D + G + L+ + A +E K ++++D G Sbjct: 15 ITLLLVDDHPVVRKGTRELLEGEADLRVVGEAESGEEAILKARQLMPDVILMDVSMPGMN 74 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + P V +L+ + + ++ ++ + ++++ + AV + A G Sbjct: 75 GIEATRAIKAERPGVGILVLTSYDDDAYVFALLEAGAAGYLLKNASEDELLGAVRAVAAG 134 Query: 121 MMFLPGDWR-------TTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 L +T + +LS R+ E+L + A G +NKEI R L+IS TV Sbjct: 135 ESALHPAVARKVLERFSTHQTPTPPEDALSPRELEVLRVAATGRTNKEIARDLDISPRTV 194 Query: 174 KAHLESLYRRLEVKNRTQAAMM 195 + HL +++ +L V +RT+A + Sbjct: 195 QVHLANIFSKLGVGSRTEAVLY 216 >UniRef50_B2SU06 Two-component system regulatory protein n=73 Tax=Proteobacteria RepID=B2SU06_XANOP Length = 222 Score = 214 bits (546), Expect = 1e-54, Method: Composition-based stats. Identities = 50/203 (24%), Positives = 101/203 (49%), Gaps = 7/203 (3%) Query: 3 IVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPE-ALVMLDGDQDGEFC 61 +++ D +F ++ ++Q+ +PGV + A D L+ ++ P+ L+++D + G Sbjct: 4 LLIADDHPLFREALRGAVQRVMPGVQLLEADNVDALYTLADAQPDADLLLMDLNMPGAQG 63 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 + L P++ V++ + ++ I +P+ + +T A+ + G Sbjct: 64 FSALVHMRSLHPQLPVVVVSAREEPTVMRRAIDHGAFGFIPKSADSDTIGRALATVLDGE 123 Query: 122 MFLPGDWRTTPEKDIKD------LKSLSARQREILTMLAAGESNKEIGRALNISTGTVKA 175 ++P + + P D ++ L+ L+ +Q +L ML AG NK+I L +S T+KA Sbjct: 124 RWIPAEAQNLPPTDSEEREVGQRLRDLTPQQFRVLQMLGAGRLNKQIAYDLGVSEATIKA 183 Query: 176 HLESLYRRLEVKNRTQAAMMLNI 198 H+ ++ R+L V NRTQA +M Sbjct: 184 HVTAILRKLGVTNRTQAVLMAGK 206 >UniRef50_A1S7C5 Response regulator receiver protein n=5 Tax=Proteobacteria RepID=A1S7C5_SHEAM Length = 238 Score = 214 bits (546), Expect = 1e-54, Method: Composition-based stats. Identities = 53/206 (25%), Positives = 98/206 (47%), Gaps = 8/206 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLE--SYPEALVMLDGDQDG 58 + +++ D +F + ++ +L A AD L Q L+ LV+LD G Sbjct: 21 LNVIIADDHPLFRNALRQALSSAFADTRWFEADSADALQQLLDKPEVDYDLVLLDLQMPG 80 Query: 59 EFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAA 118 Y L +P++ V++ + + + + IH+ +P+ +++ET A+++ Sbjct: 81 SHGYSTLIHLRSHYPDIPVVVISAHEDAQTISRAIHYGSAGFIPKSASMETLTEAMSAVL 140 Query: 119 MGMMFLPGDWRTTPEKD------IKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 G ++LP D ++ L L+ +Q +L M A G NK+I L +S T Sbjct: 141 YGDIWLPQDIELVKIEEDGTDQVAGKLADLTPQQYRVLQMFAEGLLNKQIAYDLGVSEAT 200 Query: 173 VKAHLESLYRRLEVKNRTQAAMMLNI 198 +KAH +++R+L V+NRTQA + L Sbjct: 201 IKAHATAIFRKLGVRNRTQAVIALQQ 226 >UniRef50_B0RP06 Transcriptional regulator, LuxR family n=22 Tax=cellular organisms RepID=B0RP06_XANCB Length = 281 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 4/202 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEA-LVMLDGDQDGE 59 + I++ D +F + L Q +P + AS A L L S+P+A LV+LD G Sbjct: 73 LTILVADDHPLFRAAVIHVLHQTLPTAEVVEASSATTLSAMLRSHPQAELVLLDLAMPGA 132 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 + L + P++ V++ +++ + R ++ F +P+ + E+ AV S Sbjct: 133 RGFSALLHVRGEHPDIPVVVISSNDHPRVIRRAQQFGAAGFIPKSTPAESIGTAVASVLD 192 Query: 120 GMMFLPGDWRTTPEKDIK---DLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAH 176 G + P E D + L L+ +Q +L LA G NK+I L ++ TVK H Sbjct: 193 GGTWFPPMTAERSEADAQLAAKLAQLTPQQFRVLLCLADGLLNKQIAHELGLAENTVKVH 252 Query: 177 LESLYRRLEVKNRTQAAMMLNI 198 + ++ ++L+ +RTQAA+++ Sbjct: 253 VTAILKKLDCYSRTQAAVLVKA 274 >UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q1ASU8_RUBXD Length = 207 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 2/200 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D + G+ L R + A +E+ + +V+LD + G Sbjct: 4 IRILVADDHPMLREGLSAVLGTRPGFEVVGEAGDGEEVLRLASGLRPDVVLLDLEMPGTG 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +L++ KV++ ++R L E + + + ++ AV + G Sbjct: 64 GVEVLRRLRGLDDPPKVVVFTAYDDERLL-EALREGARGCLLKGASRTEIFDAVRTVHAG 122 Query: 121 MMFLPGDWRTTPEKDIK-DLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLES 179 +P + K+++ + + L+ R+ E+L ++A G +N+E+ RAL IS TVK H+ S Sbjct: 123 GSVIPPEITARVLKEMRGESEPLTPRELEVLRLVARGLTNREVARALFISERTVKFHVSS 182 Query: 180 LYRRLEVKNRTQAAMMLNIS 199 L +L +NRTQA + Sbjct: 183 LLAKLRAENRTQAVAIARER 202 >UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillaceae RepID=A0RDP4_BACAH Length = 221 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 84/201 (41%), Gaps = 5/201 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ + I G+ L+ R + A ++ + + +V++D Sbjct: 15 IKLLLVEDHHIVRRGLVFFLKTREEFEIVGEAENGEDALTFVRTERPDVVLMDLSMPKMD 74 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ +K+LI ++ + ++ + ++ E ++ + G Sbjct: 75 GIEATKQIKQYDETIKILILSSFSEQDYVLPALEAGADGYQLKEVQPEQLVASIIAIYEG 134 Query: 121 M-----MFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKA 175 P + K L+ R++E+L +A G SNKEI L+I+ TVK Sbjct: 135 NANFHPKVTPALLGRSAVKKENPFSMLTKREQEVLQEIAKGRSNKEIAAELHITEQTVKT 194 Query: 176 HLESLYRRLEVKNRTQAAMML 196 H+ ++ +LEV +RTQAA+ Sbjct: 195 HVSNILAKLEVDDRTQAALYA 215 >UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR family n=4 Tax=Bacteria RepID=D1C9Z8_SPHTD Length = 212 Score = 213 bits (544), Expect = 2e-54, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 84/200 (42%), Gaps = 7/200 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D + G+ L+ + + A D+ Q+ +V++D G Sbjct: 2 IRILVVDDHPVVREGLVAILEAQEDLTVVGEAGDGDQAVQQYRDLKPDVVLMDLAMPGTD 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +Q+ P +V++ + + + + + + E AV G Sbjct: 62 GVQAIQEIKRIDPNARVVVLTAYDTDERILQAVQAGASGYLLKGAPREDIFRAVRVVYRG 121 Query: 121 MMFLPGDWRTTPEKDIKDL-------KSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 L + DL + L+AR+ ++LT++A G NKEI L+I+ TV Sbjct: 122 GSLLEPVVAGKLLNRMGDLLRGEPVEEELTARELDVLTLMARGLRNKEIAYELSITERTV 181 Query: 174 KAHLESLYRRLEVKNRTQAA 193 K H ++YR+L+V RT+A Sbjct: 182 KFHANAIYRKLDVSGRTEAV 201 >UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NIZ3_ROSCS Length = 230 Score = 213 bits (544), Expect = 2e-54, Method: Composition-based stats. Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 9/202 (4%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 ++++ D + G+ L + A + +P LVM+D Sbjct: 15 RVLIVDDHELARAGLAAVLACEPGIEVVGEADNGAAALDFVARHPVDLVMMDLQMPVIDG 74 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 ++ P + +++ L E + V + +D++ AV G Sbjct: 75 IEATRRIKALHPAIGIIMVTVQAKPDALMEALRAGVAGYLLKDASRREIIGAVRQVLRGE 134 Query: 122 MFLPGDW---------RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 FL D TP D ++ L+ R++++L +L G++N+EI R L IS GT Sbjct: 135 AFLNPDLVLQTLRRLAHATPTDDATPIEPLTPREQQVLRLLMQGKTNREIARELIISPGT 194 Query: 173 VKAHLESLYRRLEVKNRTQAAM 194 VK H+E + +L V +RTQAA+ Sbjct: 195 VKVHVEHIIAKLGVSDRTQAAV 216 >UniRef50_Q2W0D2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=4 Tax=Rhodospirillaceae RepID=Q2W0D2_MAGSA Length = 290 Score = 213 bits (544), Expect = 2e-54, Method: Composition-based stats. Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 11/208 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPE-ALVMLDGDQDGE 59 M+I++ D +F G++ L Q +I A + ++S + +V+LD G Sbjct: 72 MKILIADDHELFRDGLRHVLDQFEGPPTIIEACDFPQAIAAVQSEKDIDIVLLDLTMPGM 131 Query: 60 FCYWLLQKTVVQFPE-VKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAA 118 L K P V +++ + ++R + + ++ +P+ S+ A+ Sbjct: 132 AWTEGLAKLKELLPSTVPLIVLSASDDRRHVLQAVNMGAAGFIPKTSSSRVMLSALKLVL 191 Query: 119 MGMMFLPGDWRTTPEKDI---------KDLKSLSARQREILTMLAAGESNKEIGRALNIS 169 G ++LP + SL+ RQRE+L +L G+SNKEI R L ++ Sbjct: 192 SGGVYLPPALLEQGGPGGDDGAPVAGESAIASLTPRQREVLALLGQGKSNKEIARVLELA 251 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMMLN 197 GTVK H+ ++ + L V NRT+A + + Sbjct: 252 EGTVKLHVTAILKALNVNNRTRAVVAAS 279 >UniRef50_B2J2N1 Two component transcriptional regulator, LuxR family n=12 Tax=Cyanobacteria RepID=B2J2N1_NOSP7 Length = 232 Score = 213 bits (544), Expect = 2e-54, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 86/209 (41%), Gaps = 12/209 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D QS+ G+K L+Q + A + + +V++D Sbjct: 9 IRLLIVDDQSLIRQGLKAMLEQEPDLEVVGDAENGKVALELVAELQPDVVLMDIRMPEMD 68 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + FP +KVL+ +T + +L + + +D A A+ G Sbjct: 69 GRTATKLIMQSFPNIKVLVLSTFDDDSYLTGAMRAGAKGYLLKDMPSSELADAIRFGHSG 128 Query: 121 MMFL------------PGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNI 168 ++AR++E+L ++ G +N+EI + L I Sbjct: 129 YTQFGPGLFDKLLVTEAASASANQNSASSKPSEITAREQEVLCLIGVGATNREIAQQLYI 188 Query: 169 STGTVKAHLESLYRRLEVKNRTQAAMMLN 197 + GTVK H+ S+ RL +KNR+Q A+ N Sbjct: 189 TEGTVKTHVTSILSRLNLKNRSQLAIYAN 217 >UniRef50_A0LVS2 Two component transcriptional regulator, LuxR family n=35 Tax=Actinomycetales RepID=A0LVS2_ACIC1 Length = 303 Score = 213 bits (543), Expect = 3e-54, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 87/208 (41%), Gaps = 12/208 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D ++F G+++ L+Q + AS E + +V+LD Sbjct: 87 IKVLVADDHALFRRGLEMVLRQEPDIQLVAEASDGAEAVARAAETLPDVVLLDVRMPKRT 146 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 P K+++ + L E I + + ++ +++ A A+ + G Sbjct: 147 GIEACAAIKEVCPSAKIIMLTISDEEADLYEAIKAGAMGYLLKEISIDEVAAAIRAVHGG 206 Query: 121 MMFLPGDWRTTPEKDIKDL------------KSLSARQREILTMLAAGESNKEIGRALNI 168 + + + L L+ R+ E+L ++A G +N++I + L I Sbjct: 207 QSLISPSMASKLLNEFASLIKRGDARHQVPAPKLTEREMEVLRLVAKGLNNRDIAKQLFI 266 Query: 169 STGTVKAHLESLYRRLEVKNRTQAAMML 196 S TVK H+ ++ +L++ +R +A + Sbjct: 267 SENTVKNHVRNILEKLQLHSRMEAVVYA 294 >UniRef50_P94439 Uncharacterized transcriptional regulatory protein yfiK n=4 Tax=Bacillales RepID=YFIK_BACSU Length = 220 Score = 212 bits (542), Expect = 4e-54, Method: Composition-based stats. Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 15/210 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D Q I G+ LQ R I A E ++K + +V++D Sbjct: 2 IKIIITDDQDIVREGLASLLQLREELDVIATARNGQEAFEKAKELEPDIVLMDIRMPVSN 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + P VKVL+ T + + E + + +D + +T AV + G Sbjct: 62 GVEGTKLITSSLPSVKVLMLTTFKDSALIAEALEEGASGYLLKDMSADTIVKAVMTVHSG 121 Query: 121 MMFLPGDWRTTPEKD---------------IKDLKSLSARQREILTMLAAGESNKEIGRA 165 M LP + + +L L+ R+ E+L L G +NKEI Sbjct: 122 GMVLPPELTAQMLNEWKREKQLKGINEIEKPNELLDLTEREIEVLAELGYGLNNKEIAEK 181 Query: 166 LNISTGTVKAHLESLYRRLEVKNRTQAAMM 195 L I+ GTVK H+ ++ +L V++RTQAA+ Sbjct: 182 LYITEGTVKNHVSNIISKLAVRDRTQAAIY 211 >UniRef50_Q1QZ85 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=Q1QZ85_CHRSD Length = 220 Score = 212 bits (541), Expect = 5e-54, Method: Composition-based stats. Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 8/205 (3%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPE-ALVMLDGDQDGEF 60 + ++ D +F + +L+Q P I A + + +P+ L++LD G Sbjct: 6 KFIVADDHPLFRAALNQALRQVAPQAEIVEADTMEATTDMVLRHPDADLILLDLHMPGAH 65 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + L + Q PEV V++ + ++ I + +P+ S+++ A A+ G Sbjct: 66 GFSGLIQLRGQSPEVPVVVISGSEEPPVVRRAIDYGASGFIPKSSSLDVIAEAIRQVLEG 125 Query: 121 MMFLP-------GDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 ++LP G+ + + + SL+ +Q +L ML G NK+I LN+S T+ Sbjct: 126 EVWLPEEMVDILGESNEEEARFAEAIASLTPQQFRVLNMLNEGLLNKQIAYELNVSEATI 185 Query: 174 KAHLESLYRRLEVKNRTQAAMMLNI 198 KAH+ ++ R+L V +RTQA + Sbjct: 186 KAHVTAILRKLGVHSRTQAVIAAQK 210 >UniRef50_A4J6C2 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=A4J6C2_DESRM Length = 218 Score = 212 bits (540), Expect = 7e-54, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 85/206 (41%), Gaps = 10/206 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G++ L + + + P +V++D + Sbjct: 5 IKLLIADDHILIREGLRKILSIEPHISVVGEVTNGQQAVDYCLKNPVDIVLMDINMPIMN 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ P + ++ +L E+I + + V +D + + A G Sbjct: 65 GIEACRQIKKLNPNIGIIALTIHDQDEYLFELIKYGISGYVLKDIHPDQLIKTILGVAQG 124 Query: 121 MMFLPGDWRTTPEKDIKDLKS----------LSARQREILTMLAAGESNKEIGRALNIST 170 F+P + L S L+ R+ E+L +A G+SNK I AL IS Sbjct: 125 ESFIPPSLTARVLAEFTRLSSGDYSEKKHLNLTEREIEVLKQVAKGQSNKAIANALYISE 184 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 TVK HL ++++++ V +RTQAA+ Sbjct: 185 KTVKNHLTNIFQKIGVADRTQAALYA 210 >UniRef50_B6INK4 Glycerol metabolism activator AgmR n=3 Tax=Rhodospirillaceae RepID=B6INK4_RHOCS Length = 214 Score = 212 bits (540), Expect = 8e-54, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPE-ALVMLDGDQDGE 59 M I++ D +F G+ L Q + A DE+ + + + L+++D Sbjct: 1 MNILIGDDHLLFREGLCRLLTQLDADANFFEAGTFDEVMELCQGDQDFDLILMDLQMPSW 60 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 + +Q+ V+I + ++ ++ + +P+ S+V+ A+N Sbjct: 61 PGFPGIQQICEIQAGTPVVIVSASESQSDVRAALDAGASGYIPKSSSVKIMLSALNLVFS 120 Query: 120 GMMFLPGDW------------RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALN 167 G +++P + + +L+ RQR++L L G+SNK+I L Sbjct: 121 GGIYVPPAAIQGEGQSSGSAAQGGGHASGPGMPALTQRQRDVLRCLREGKSNKQIAYELG 180 Query: 168 ISTGTVKAHLESLYRRLEVKNRTQAAM 194 +S GTVK H+ ++ R L V+NRTQA + Sbjct: 181 LSEGTVKIHVTAVMRSLGVRNRTQAVI 207 >UniRef50_B4CWX5 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B4CWX5_9BACT Length = 210 Score = 211 bits (539), Expect = 9e-54, Method: Composition-based stats. Identities = 44/192 (22%), Positives = 82/192 (42%), Gaps = 1/192 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D + G+ SL + A A E + + +V++D G Sbjct: 7 IRILVVDDHHVVRSGLAASLGLEDDLNVVGEAGNAGEAVTQFRKHHPDVVLMDLRLPGAN 66 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++P+ +VL+ T + + + + + + E A+ + A G Sbjct: 67 GTAATADLRREWPDARVLMFTTFDGEEDIYRAMQAGARGYLLKSAAREELLSAIRAVAAG 126 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 L + +S R+RE+L ++A G++NKEI AL IS TVK H +L Sbjct: 127 ERHLSAALAQRLAGRVAA-PDVSDREREVLQLIARGKANKEIAAALGISEETVKRHASNL 185 Query: 181 YRRLEVKNRTQA 192 + ++ V +R QA Sbjct: 186 FVKMGVADRAQA 197 >UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteria RepID=C1F9F6_ACIC5 Length = 213 Score = 211 bits (539), Expect = 9e-54, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 77/193 (39%), Gaps = 1/193 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D I G+ L I A E + + ++D Sbjct: 10 IRILVVDDHHIVRQGLVALLNTLPGFEVIAEAGDGVEAIALHREHQPDITIMDLRLPRMN 69 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + + P ++++ T + + + + + A+ S G Sbjct: 70 GVEAITRIREESPGARIVVLTTFDGDEDIYRALQAGARGYLLKGMDADDLTAAIRSVHAG 129 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 +P + + + L+AR+ ++L ++ G SN+EI L+IS TVK H+ +L Sbjct: 130 KSRIPTVVAERLAERMSGSE-LTARELDVLRLIVQGRSNREIAADLHISEATVKTHINNL 188 Query: 181 YRRLEVKNRTQAA 193 +L V +RTQAA Sbjct: 189 LSKLGVSDRTQAA 201 >UniRef50_B8CLF7 Regulatory protein, LuxR:Response regulator receiver n=76 Tax=Proteobacteria RepID=B8CLF7_SHEPW Length = 219 Score = 211 bits (539), Expect = 9e-54, Method: Composition-based stats. Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 8/206 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYP--EALVMLDGDQDG 58 + I++ D +F + ++ +L A AD L L++ +V+LD G Sbjct: 6 LNIIIADDHPLFRNALRQALATAFTNTQWFEADSADALQNLLDNSDIEYDVVLLDLQMPG 65 Query: 59 EFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAA 118 Y L + E+ V++ + + + IH+ +P+ S++ET A A+ + Sbjct: 66 SHGYSTLIHLRTHYQELPVVVISAHEDNTTISRAIHYGSSGFIPKSSSMETLATALEAVL 125 Query: 119 MGMMFLPGDWRTTPEKD------IKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 G ++LP D L L+ +Q ++L M A G NK+I L +S T Sbjct: 126 FGDVWLPEGVELQEVSDDGTDQMASKLSDLTPQQYKVLQMFAEGLLNKQIAYDLGVSEAT 185 Query: 173 VKAHLESLYRRLEVKNRTQAAMMLNI 198 +KAH +++R+L V+NRTQA + L Sbjct: 186 IKAHATAIFRKLGVRNRTQAVIALQQ 211 >UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphylococcaceae RepID=B9E7V9_MACCJ Length = 210 Score = 211 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 4/199 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKL-ESYPEALVMLDGDQDGE 59 M I++ D I GMK L I + EL + L E+ L+++D Sbjct: 4 MDIILVDDHHIVRQGMKFLLSTEASFNVIADFNNGRELLEHLDETQLPDLIIMDLVMPEL 63 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 ++ ++P+VKVL+ ++ ++ + V+ +DS + + A Sbjct: 64 NGIEATRRIKAKYPDVKVLVLSSFIDEEHVLGVMDAGADGYEMKDSEPKALINTIKQIAA 123 Query: 120 GMMFLPGD---WRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAH 176 G D R + LS R+ E+L ++ G +NKEI L +S TVK H Sbjct: 124 GEQIFHPDVMKVRKSGMNLAHLRNPLSKRELEVLKAMSEGLTNKEIAEKLFVSEKTVKTH 183 Query: 177 LESLYRRLEVKNRTQAAMM 195 + ++ +LEV +RTQA+M Sbjct: 184 VSHIFAKLEVGDRTQASMY 202 >UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridium RepID=C5RGJ7_CLOCL Length = 220 Score = 211 bits (538), Expect = 1e-53, Method: Composition-based stats. Identities = 47/216 (21%), Positives = 93/216 (43%), Gaps = 17/216 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + +++ D Q I G+K+ L I A +EL L+++ ++++D Sbjct: 2 INVIIADDQKIVREGIKMILSLYDEINVIGEAENGEELINLLQNFMADVILMDVRMPIID 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + ++ KV+I T ++ + I + +D E A+ S G Sbjct: 62 GVEATKIIKERYIHTKVIILTTFNEDEYIFKAIKNGADGYLLKDVGSEFIINAIRSVYNG 121 Query: 121 MMFLPGDWRTTPEKDIKD-----------------LKSLSARQREILTMLAAGESNKEIG 163 M L + K L SL+ R+ ++ ++A G+SNK+I Sbjct: 122 AMLLDPEVTVKVVKAFNSITNESKNSNEFDNINNKLNSLTPREIDVAKLVAQGKSNKDIC 181 Query: 164 RALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 R+L ++ GTVK ++ + +LE+ +RT+ A+ +N + Sbjct: 182 RSLFLTEGTVKNYVTRILGKLELNSRTELAVFINQA 217 >UniRef50_A7NP18 Two component transcriptional regulator, LuxR family n=12 Tax=Bacteria RepID=A7NP18_ROSCS Length = 222 Score = 211 bits (538), Expect = 1e-53, Method: Composition-based stats. Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 6/202 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D +F G++ L+++ + + AS E+ + + +V+LD Sbjct: 6 IRILLADDHRMFRQGLRELLERKGGFIIVGEASTGREVLAQAAALRPDIVLLDIQMPEID 65 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + ++ P+VKV++ + L E I A + +D+ + + G Sbjct: 66 GVAVARQLAQTHPDVKVIMLTMYRQDQHLFEAIKAGARAYLLKDADADELIDVIERVHRG 125 Query: 121 MMFLPGDWRTTPEKDIKDL------KSLSARQREILTMLAAGESNKEIGRALNISTGTVK 174 L + + L + L+ R+R+ILT+LA G N+ I + L +S TV Sbjct: 126 EAALDPTVTLRVFDEFRRLSIDQDAEQLTERERDILTLLAEGHDNRTIAQRLFLSEKTVG 185 Query: 175 AHLESLYRRLEVKNRTQAAMML 196 L ++++L V NRTQAA++ Sbjct: 186 NRLSEIFQKLGVSNRTQAALVA 207 >UniRef50_A9AZR3 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AZR3_HERA2 Length = 213 Score = 211 bits (538), Expect = 1e-53, Method: Composition-based stats. Identities = 43/200 (21%), Positives = 91/200 (45%), Gaps = 4/200 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D +I G++ L + + + A + + ++++D Sbjct: 5 IRIMLVDDHAIVREGLRTLLAEDTEFLIVGEAQNGADAIELAAVVRPHVILMDLVMPNVD 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 Q P ++++ + + +W+ + I + ++ LA+ + A G Sbjct: 65 GIQATQALQSLMPSSRIIVLTSFSDDQWVSKAIQAGASGYLLKNVLKAELFLAIRTVANG 124 Query: 121 MMFLPGDWRTTPEK----DIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAH 176 FL + + T + L SL+ R+R +L + G SNKEI R+L+++ GTVK + Sbjct: 125 QPFLHAEAQRTLMRQSTAPPSLLPSLTERERSVLDGIVGGLSNKEIARSLHLTEGTVKGY 184 Query: 177 LESLYRRLEVKNRTQAAMML 196 + ++ +L V +RTQAA+ Sbjct: 185 VSTILTKLAVADRTQAALYA 204 >UniRef50_B1ZY58 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=B1ZY58_OPITP Length = 223 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 45/194 (23%), Positives = 90/194 (46%), Gaps = 1/194 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D G+ ++ + + AS +E + + +V++D G Sbjct: 20 IRVLVVDDHPPMRVGLVALIRSQPGMDVVAEASDGEEAIEIYDDLQPDVVLMDLRMPGMG 79 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + PE +V++ +T + + + + +D +E A V + G Sbjct: 80 GVEAILAIRKKAPEARVIVLSTYDWDEDIHRALQSGAKSYLLKDMPIEEIASTVRAVYAG 139 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 LP + + + L+ R+R++L L G SNKEI +L IS TVK+HL++L Sbjct: 140 DTSLPRSVAERLTERAQR-EQLTERERDVLESLIKGRSNKEIASSLCISEDTVKSHLKTL 198 Query: 181 YRRLEVKNRTQAAM 194 + +L V++RT AA+ Sbjct: 199 FAKLRVRDRTGAAI 212 >UniRef50_B5JFN7 Response regulator receiver domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFN7_9BACT Length = 220 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 49/212 (23%), Positives = 90/212 (42%), Gaps = 14/212 (6%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +QIV+ D Q++F+ G+K L + E + +V++D + Sbjct: 5 IQIVLADDQALFLEGLKTLLSLDDSLEIVGECHNGQEALEACRRLRPQIVLMDLNMPVMD 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + PEV VL T + + E + + +D+ + A+ + + G Sbjct: 65 GVAATKAIKQELPEVNVLTLTTFDDDERVFEALKAGSSGYLLKDTPSKQLVEAIRAVSSG 124 Query: 121 MMFLPGDWRTTPEKDIKDL--------------KSLSARQREILTMLAAGESNKEIGRAL 166 FL + + + + LS R+ ++L L+ G SNKEI L Sbjct: 125 ESFLQPSIASKVLAEFSRMSGPAAVKKAPVQLREPLSQREEQVLVWLSRGCSNKEIASHL 184 Query: 167 NISTGTVKAHLESLYRRLEVKNRTQAAMMLNI 198 +++ GTVK H+ ++ +L V +RTQAA+M Sbjct: 185 DLAEGTVKNHVSNVLGKLGVLDRTQAALMARD 216 >UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacillus RepID=C3BET8_9BACI Length = 216 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 14/207 (6%) Query: 4 VMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCYW 63 ++ D QS+ G+ + L R + A+ DE+ + E ++++D Sbjct: 1 MIVDDQSLIRDGLAMLLNLRSELEVVGTANDGDEVVRIAEQLQPEIILMDIRMPRINGVE 60 Query: 64 LLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMF 123 + +FP++KVL+ T + + E + + +D + A+ + G Sbjct: 61 GTRLIRERFPDMKVLMLTTFNDSELIFEALEQGASGYLLKDMETDAIVQAILTVHAGGAV 120 Query: 124 LPGDWRT--------------TPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIS 169 LP D + + K ++ L+ R+ ++L + G +NKEI L I+ Sbjct: 121 LPQDITAQIVKELKRTKVVEISGQNQPKQVEQLTEREIDVLREIGLGLNNKEIAEKLFIT 180 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMML 196 GTVK H+ +L +LE+++RTQAA+ Sbjct: 181 EGTVKNHVSNLISKLELRDRTQAAIYA 207 >UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteria RepID=Q8YV43_ANASP Length = 209 Score = 210 bits (536), Expect = 2e-53, Method: Composition-based stats. Identities = 37/196 (18%), Positives = 86/196 (43%), Gaps = 1/196 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D +IF G+ + + + A +++ E + + ++D Sbjct: 7 IRVLIADDHAIFRQGLATIINRDPEMQVVAQAENGEQVIALFEEHQPDVTLMDLRMPEVE 66 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + ++++ T + + + + +++ + A+ + G Sbjct: 67 GVAAISAICATAKSARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVHRG 126 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 ++P D + + + LS R+ E+L LA G SN +I AL+I GTVK+H+ + Sbjct: 127 HKYIPPDVGAKLVQRLSN-PELSERELEVLRSLAQGMSNADIADALSIGEGTVKSHVNRI 185 Query: 181 YRRLEVKNRTQAAMML 196 +L+V +RTQA ++ Sbjct: 186 LNKLDVSDRTQAVIVA 201 >UniRef50_B0C756 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C756_ACAM1 Length = 224 Score = 210 bits (536), Expect = 2e-53, Method: Composition-based stats. Identities = 45/207 (21%), Positives = 93/207 (44%), Gaps = 8/207 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + I +G+K Q + A + ++ ++++D + Sbjct: 8 IRVLLVDDEDIVRYGLKAIAQGTPEIEIVGEAGSGKAAIAQAKTLQPDVILMDINMPQMD 67 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 Q+ P KVLI T +L E + + + +++ E F ++ A G Sbjct: 68 GVTATQEISRIQPHAKVLILTTHDEAEYLVEAMQQGAVGYLLKNTPPEDFIQSIQQAHKG 127 Query: 121 --------MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 L +T I+ + ++ R++++L ++A G SN+EI L+I+ T Sbjct: 128 YLQLGPGLGQKLCQLLKTPVRPQIEAFEGITPREQDVLKLVATGASNREISETLHITEKT 187 Query: 173 VKAHLESLYRRLEVKNRTQAAMMLNIS 199 VK H+ S+ R+ V++RTQ A+ N + Sbjct: 188 VKNHVSSILSRVGVQSRTQLAIWANSA 214 >UniRef50_B4D808 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D808_9BACT Length = 212 Score = 210 bits (535), Expect = 2e-53, Method: Composition-based stats. Identities = 43/193 (22%), Positives = 84/193 (43%), Gaps = 1/193 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G+ + L Q+ + A A++ + + ++D G Sbjct: 7 IRLLLVDDHFVVRSGLAMLLAQQDDFAVVAEADDAEQAVAHYRQHRPDVTLMDVRMPGAS 66 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 LQ+ +FP+ +V++ T + + + + + AV G Sbjct: 67 GIEALQRIRGEFPDARVIMLTTYDLDEDVFRALEAGAVGYLLKSVRHAELFAAVRKVHAG 126 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 +P T K+ LS R+ E L +LA G SN+EIG AL ++ T KAH++++ Sbjct: 127 ERCVPQSLETR-CKNGALRSRLSPREVETLDLLARGFSNREIGSALGVTERTAKAHVQAI 185 Query: 181 YRRLEVKNRTQAA 193 +LE +R +A Sbjct: 186 LVKLEAADRAEAV 198 >UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5X6_PELCD Length = 223 Score = 209 bits (534), Expect = 3e-53, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 103/211 (48%), Gaps = 14/211 (6%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 ++ + D + G+++SL + I AS + +K++ P + ++D D G Sbjct: 8 KVFLADDHPLLRTGLRMSLSRFADIDFIGEASDGFKAVEKIKQNPPDVALIDVDMPGLSG 67 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 ++ Q+P++ +LI ++ +K +++E + V + + A + + + G Sbjct: 68 IAAVRMLRKQYPDMTLLILSSYSDKHFIEEAMQAGADGYVLKSIDINELADLIRAFSCGE 127 Query: 122 MFLPG--------------DWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALN 167 + + + +KD + L+ R+++IL+ LA G+ NKEI AL Sbjct: 128 HPMSPYLMDLAVDWHASEQEEESPADKDDESDAFLTRREQQILSCLAQGQGNKEISNALF 187 Query: 168 ISTGTVKAHLESLYRRLEVKNRTQAAMMLNI 198 IST TVK H+++++++LEVK+R +A + Sbjct: 188 ISTETVKTHIKNIFKKLEVKSRLEAVIAAKE 218 >UniRef50_C4ZEG3 Two-component response regulator (Extracellular proteinase response regulator) n=3 Tax=Bacteria RepID=C4ZEG3_EUBR3 Length = 214 Score = 209 bits (534), Expect = 3e-53, Method: Composition-based stats. Identities = 48/203 (23%), Positives = 96/203 (47%), Gaps = 7/203 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + I++ D S+ G+K L+ I A ++ KL+++ +++LD + Sbjct: 3 INIMITDDHSMIREGLKNLLELDGDIKVIAEAENGEDCLDKLKTFRPDVLLLDINMPKMN 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +L+ + +VKVL+ +L + + + V +DS A+ + A G Sbjct: 63 GLEVLKALKDRKSKVKVLVLTVHNETEYLMKAVDIGINGYVLKDSESAELKKAIFTIADG 122 Query: 121 MMFLPGDWRTTP-------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 ++ +D + +L+ R+ E+L +A G+ N++I + + IS TV Sbjct: 123 ETYIQPSLIPALNSKMIQKNEDELKIDALTKREMEVLKEMAVGKFNRDIAKEMKISERTV 182 Query: 174 KAHLESLYRRLEVKNRTQAAMML 196 K H+ S++++LEV +RTQAA+ Sbjct: 183 KNHISSIFKKLEVTDRTQAAVFA 205 >UniRef50_C6CZA5 Two component transcriptional regulator, LuxR family n=4 Tax=Firmicutes RepID=C6CZA5_PAESJ Length = 221 Score = 209 bits (534), Expect = 4e-53, Method: Composition-based stats. Identities = 45/207 (21%), Positives = 96/207 (46%), Gaps = 10/207 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLE----SYPEALVMLDGDQ 56 +++++ D + G++ L + A LE S ++++D Sbjct: 7 LKVMIVDDHDMVRTGLRTYLMLEPKFEVVAEAGSGQAAISMLEAGLPSGLPDVILMDLMM 66 Query: 57 DGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS 116 G ++ +V++P +K+++ + + I ++ V + + E A++ Sbjct: 67 PGMDGIETTRQLIVEYPNLKIIMLTSFLEDDKVYGAIEAGAVSYVLKTVSAEELIYALHG 126 Query: 117 AAMGMMFLPGDWRTTPEKDIKDL------KSLSARQREILTMLAAGESNKEIGRALNIST 170 A GM + D + ++ + L+ R++E+L ++A G SNKEIG L+IS Sbjct: 127 AVKGMPVMTADVSQALTRGLRQRTAQSGDEELTEREKEVLLLIAEGRSNKEIGEELHISV 186 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMMLN 197 TVK H+ +L + E+++RTQ A++ + Sbjct: 187 KTVKTHVSNLLMKCELEDRTQLAVLAH 213 >UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=Proteobacteria RepID=Q09C30_STIAU Length = 213 Score = 209 bits (533), Expect = 4e-53, Method: Composition-based stats. Identities = 44/204 (21%), Positives = 90/204 (44%), Gaps = 10/204 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + IV+ D ++ G++ L+ + AS +E +++ +V++D Sbjct: 2 INIVLVDDHALIREGIRSLLEFTPDLHVVGEASDGEEAVKRVRELSPDVVLMDVRMPRMT 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L+ + PE +V++ T + E + V + +D T + A A+ A G Sbjct: 62 GLEALRAMRREAPERRVVLLTTFDEDSVVVEALRAGVKGFLLKDVTRDQLADAIRRVANG 121 Query: 121 MMFLPGDWRTTPEKDIKDL----------KSLSARQREILTMLAAGESNKEIGRALNIST 170 LP ++ ++ + L+ R+ E++ ++A G SN+EI L + Sbjct: 122 ETLLPPGVAERVQRGFTEVPQEFPHAELPEGLTRRELEVMRLIARGLSNREIATVLGTAE 181 Query: 171 GTVKAHLESLYRRLEVKNRTQAAM 194 GTVK ++ +L V++RT+A + Sbjct: 182 GTVKNQTSNILAKLGVRDRTRAVL 205 >UniRef50_Q1AST2 Two component transcriptional regulator, LuxR family n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AST2_RUBXD Length = 232 Score = 209 bits (533), Expect = 5e-53, Method: Composition-based stats. Identities = 47/203 (23%), Positives = 90/203 (44%), Gaps = 10/203 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G ++ L+Q + AS E + +V++D G Sbjct: 11 VRLIVVDDHDLIRAGFRLVLEQEPDFEVVGEASSGREAIELCRRLRPDVVVMDLAMPGVD 70 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ + P+V VL+ + ++ E + V + S + A+ G Sbjct: 71 GLEATRRIKEEHPQVAVLVVTALEDPEYMLEALKAGAAGYVLKSSPLPRVISALRRLLSG 130 Query: 121 MMFLPGDWRTTPEKDIKD----------LKSLSARQREILTMLAAGESNKEIGRALNIST 170 L + +D+ + L+AR+RE+L ++A G +N EI R L IS Sbjct: 131 ESPLNQELAARLIQDLARRPGGGGNPPPAEELTAREREVLVLMARGRTNPEIARELVISR 190 Query: 171 GTVKAHLESLYRRLEVKNRTQAA 193 GT K+H++++ R+L V +RTQA Sbjct: 191 GTAKSHVQNIIRKLGVSDRTQAV 213 >UniRef50_B4D831 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B4D831_9BACT Length = 209 Score = 209 bits (533), Expect = 5e-53, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 87/196 (44%), Gaps = 1/196 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D ++ G+ ++ + A+ + ++ + +V +D G Sbjct: 5 IRVLIVDDHAMMRLGLVEAIAGERDLTLVGEAANGTQCLEQYRKHQPDVVTMDFRLPGAD 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +FP+ +V++ + + + + + V + + VE A+ G Sbjct: 65 GAESTAHLRTEFPDARVVVLSVFEGEEDIWRAVEAGAMGYVSKSAEVEEVLEAIRCVVGG 124 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 + P + + +L+ R+ ++L + AG SNKEI AL++S TVK H+ + Sbjct: 125 ETYFPAPIASKLASR-RTRDALTPREHQVLHHIVAGLSNKEIAAALHMSEATVKLHISNT 183 Query: 181 YRRLEVKNRTQAAMML 196 +L V +RTQAA++ Sbjct: 184 LAKLHVADRTQAAIVA 199 >UniRef50_C6D0G6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=C6D0G6_PAESJ Length = 225 Score = 209 bits (532), Expect = 6e-53, Method: Composition-based stats. Identities = 47/212 (22%), Positives = 90/212 (42%), Gaps = 16/212 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D I + G+ L + + A E +K +V++D + Sbjct: 3 IKILLADDHQIVLKGISFFLAMQPDFELVGEAHNGKEAVEKAGELQPDIVLMDLNMPIMD 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 Q P +KVL+ + ++ + + + + +D + A A+ SA G Sbjct: 63 GIEASALIKEQHPHIKVLVLTSFADQSHIVPALQTGAIGYMLKDVEPDQLAEAIRSAYKG 122 Query: 121 MMFLPGDWRTTP----------------EKDIKDLKSLSARQREILTMLAAGESNKEIGR 164 + L D K L++L+ R+ E+L +L G SNK+I + Sbjct: 123 NIQLHPDISRALLSRPEPEPRPEPVIQHSNRDKSLEALTPRELEVLELLTKGLSNKDIAQ 182 Query: 165 ALNISTGTVKAHLESLYRRLEVKNRTQAAMML 196 L ++ TVK H+ S+ +L++ +RTQAA+ Sbjct: 183 TLIVAEKTVKTHVSSILSKLDLSDRTQAALFA 214 >UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR family n=29 Tax=Alphaproteobacteria RepID=Q1GIA7_SILST Length = 233 Score = 208 bits (531), Expect = 7e-53, Method: Composition-based stats. Identities = 39/189 (20%), Positives = 89/189 (47%), Gaps = 1/189 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G++ L+ + S E + E+ ++++D + Sbjct: 24 IRVLIVDDHPMVAEGIQSILESYGDIEVVGAVSSGREAIARAEALVPDVILMDLNMPDVG 83 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + PE++VLI + + ++ + + V +D E A+++ G Sbjct: 84 GLSATEIIQERCPEIRVLILSMHDSPEYITTALSHGAVGYVLKDVQPEEIKTAIDAVMRG 143 Query: 121 MMFLP-GDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLES 179 +L G + + ++L+ R++ IL LA G+SNKE+ +AL+IS TV+ H ++ Sbjct: 144 EQYLCTGAAGSLSPQSQTSREALTGREQTILLELAQGKSNKEVAQALDISVRTVETHRKN 203 Query: 180 LYRRLEVKN 188 + R+L + + Sbjct: 204 IKRKLGISS 212 >UniRef50_Q4KHB4 DNA-binding response regulator, LuxR family n=3 Tax=Pseudomonas RepID=Q4KHB4_PSEF5 Length = 216 Score = 208 bits (531), Expect = 8e-53, Method: Composition-based stats. Identities = 52/204 (25%), Positives = 97/204 (47%), Gaps = 8/204 (3%) Query: 3 IVMFDRQSIFIHGMKISL-QQRIPGVSIQGASQADELWQKLESYPE-ALVMLDGDQDGEF 60 I++ D +F + ++ P V + + EL +L + LV+LD + G + Sbjct: 6 ILIADDHPLFRSALHQAVTLGLGPDVRLVEVASIAELEVRLTEKSDWDLVLLDLNMPGAY 65 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + L Q+P++ V++ + + F +P+ S++E AV S G Sbjct: 66 GFSGLVLLRGQYPQIPVVMVSAQEEASVMVRSREFGASGFIPKSSSLEVIQQAVRSVLDG 125 Query: 121 MMFLPG------DWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVK 174 ++ P + + L SL+ +Q +LTM+ G NK+I L++S T+K Sbjct: 126 DVWWPPQAFEEVSVSAEAKAASEGLASLTPQQFRVLTMVCEGLLNKQIAYELSVSEATIK 185 Query: 175 AHLESLYRRLEVKNRTQAAMMLNI 198 AH+ +++R+L V+ RTQAA++L Sbjct: 186 AHVTAIFRKLGVRTRTQAALLLQQ 209 >UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ8_HALOH Length = 209 Score = 208 bits (530), Expect = 9e-53, Method: Composition-based stats. Identities = 45/198 (22%), Positives = 92/198 (46%), Gaps = 4/198 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +Q+ + D + G+K L R + + ++ +++ + ++D G Sbjct: 2 IQVYLVDDHPFVLQGLKAYLNTREGIEIVGTSGNGEKAIKEIAKLNPEVAVVDLRLPGLN 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + ++ + P +V+I ++ + + E I L+ V +DS E A+ +A G Sbjct: 62 GIEVTREIKKKNPGTEVIILSSFNKEDEVIEAIDAGALSYVMKDSRPEKLVEAIKAARRG 121 Query: 121 MMFLPGDWR----TTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAH 176 L + + + L+ R++E+L L G SN++I + L IS TVK H Sbjct: 122 EPVLTPGVAKKIMKRAARKGRKTEPLTPREKEVLACLVRGNSNRDIAKTLCISETTVKTH 181 Query: 177 LESLYRRLEVKNRTQAAM 194 + ++ ++L+VK+RTQA + Sbjct: 182 VSNILKKLDVKDRTQAVI 199 >UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8B3_9BACT Length = 212 Score = 208 bits (530), Expect = 1e-52, Method: Composition-based stats. Identities = 44/196 (22%), Positives = 92/196 (46%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G+K L++ + A+ DE W+ +E + +LD G Sbjct: 4 IRVILADDHPLTRQGLKAYLEREENVALVGEAADGDEAWKLIEELKPDVALLDIRMPGAD 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L ++ V ++ + +++++ + V + ++ A+ + A G Sbjct: 64 GITLARRIKENKLPVAAIMLTSYDSQQYVLASLKAGAKGFVLKTTSAGALMKAIQTVATG 123 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 +FL + + + ++LS R+RE+L A G S+KE+ L IS TV+ HL S+ Sbjct: 124 SLFLDSEVASVVGAQEELTEALSPREREVLLCAARGLSSKEVAAQLYISERTVQTHLASV 183 Query: 181 YRRLEVKNRTQAAMML 196 Y +L N+T+A ++ Sbjct: 184 YDKLGAHNKTEAMLLA 199 >UniRef50_Q024A4 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q024A4_SOLUE Length = 225 Score = 207 bits (529), Expect = 1e-52, Method: Composition-based stats. Identities = 42/196 (21%), Positives = 86/196 (43%), Gaps = 1/196 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G+ + + + A E + ++++D G Sbjct: 23 IRVLIADDHPVVCLGLLGIINGQPDMTVVGQAKTGTEAVALARKHSPDVILMDLRMPGMS 82 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + PE V++ T +++ + + + + + A+ S G Sbjct: 83 GVEATEVIRAERPESAVIVLTTYQGDEDIRKALAAGAQSYLLKGMSHLKLLEAIRSVRTG 142 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 + P R + + +LS R+ +IL ++ G SN+EI ALNI+ GTVK H+ + Sbjct: 143 HTYFPRAIRNSVPGKLNR-AALSPREMDILRLIVRGLSNQEIADALNITRGTVKWHVNII 201 Query: 181 YRRLEVKNRTQAAMML 196 RRL+V +RTQA ++ Sbjct: 202 LRRLDVNDRTQAVVVA 217 >UniRef50_A9B5L0 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5L0_HERA2 Length = 207 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 87/199 (43%), Gaps = 3/199 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + HG+ L + A+ + +E +V+LD Sbjct: 2 IRVLVVDDHPVVRHGLMAMLGWEQDFEPVGDAADGQQAVNLIEQQQPDVVLLDLRLPQLS 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +++ T P + L+ T ++ ++ + +D++ E A+ S G Sbjct: 62 GIEVMRHTRASAPNTRFLVLTTYDTDEYIGPALNAGAAGYLLKDASPEEVFRAIRSIYEG 121 Query: 121 MMFLPGDWRTTPEKDIKDLKS---LSARQREILTMLAAGESNKEIGRALNISTGTVKAHL 177 L K + + LS R+ ++L +L GESNK I +LNIS T+K+H+ Sbjct: 122 GAALQSGIAARVLKRLATEPAEDELSQRELDVLQLLVRGESNKAIALSLNISENTIKSHV 181 Query: 178 ESLYRRLEVKNRTQAAMML 196 ++ +L+V++R +A + Sbjct: 182 SHIFSKLDVRSRAEAVAVA 200 >UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ Length = 218 Score = 207 bits (527), Expect = 2e-52, Method: Composition-based stats. Identities = 49/207 (23%), Positives = 88/207 (42%), Gaps = 14/207 (6%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQD-GE 59 M+IV+ D ++ G + L + + A+ E +QK+ + +++LD GE Sbjct: 1 MKIVIADDHAVVRTGFSMILNYQEDMEVVATAADGVEAYQKVLEHRPDVLILDLSMPPGE 60 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 K FP+ K+LI ++ +L V+ + ++S E LAV + Sbjct: 61 SGLIATSKISESFPDTKILILTMFDDEEYLFHVLKSGAKGYILKNSPDEQLILAVRTVYQ 120 Query: 120 GMMFLPGDWRTT-------------PEKDIKDLKSLSARQREILTMLAAGESNKEIGRAL 166 G ++ T+ K LS R+ EIL ++A G NK+I L Sbjct: 121 GETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNKDIAEKL 180 Query: 167 NISTGTVKAHLESLYRRLEVKNRTQAA 193 +S TV+AH + +L +K++ + Sbjct: 181 FVSVKTVEAHKTHIMTKLNLKSKPELV 207 >UniRef50_A4TWP7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TWP7_9PROT Length = 213 Score = 207 bits (527), Expect = 2e-52, Method: Composition-based stats. Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 11/207 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYP-EALVMLDGDQDGE 59 M+I++ D + G++ +++ PG IQ A E ++E+ P L++LD G Sbjct: 1 MRIILADDHVMLREGLRPFVERIAPGTIIQEAGSFTEALAQIEADPSVDLLILDIKMPGM 60 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 + L +FP ++ +I ++ ++ + E + +P+ + A+ Sbjct: 61 NGFQGLSTIKTRFPAIRCVILSSMADRDHVLEAMRLGADGFIPKHLSGGAMVSALQLVLS 120 Query: 120 GMMFLPGDWRTTPEKDIKD----------LKSLSARQREILTMLAAGESNKEIGRALNIS 169 G F+P + I L L+ R+R+IL +L G NK I L++ Sbjct: 121 GERFIPSMLMDSANNQISGASDRSPSGDLLGRLTPRERDILHLLREGLPNKVIAARLDVR 180 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMML 196 TVK+HL +++R+L V+NR QA ML Sbjct: 181 EVTVKSHLGNMFRKLGVQNRLQAMRML 207 >UniRef50_A4VZN8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=52 Tax=Bacilli RepID=A4VZN8_STRS2 Length = 213 Score = 207 bits (527), Expect = 2e-52, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 86/199 (43%), Gaps = 3/199 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G+K L + + AS +E K +V++D Sbjct: 4 IRVMLVDDHEMVRLGLKSYLNLQPDVEVVAEASDGEEGLAKALEVKPDVVVMDLVMPKMT 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + ++P+ +++I + + + V+ + + S+ + A+ A+G Sbjct: 64 GVEATLALLKEWPQAQIVILTSYLDNEKIYPVLEAGARGYMLKTSSADEILAAIRKVALG 123 Query: 121 MMFLPGDWRTTPE---KDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHL 177 + + E + L+AR+REILT+LA G N+ I IS TVK H+ Sbjct: 124 EYAIETEVEKKVEHHKRHPDLHDDLTAREREILTLLAKGYDNQRIADESFISLKTVKTHV 183 Query: 178 ESLYRRLEVKNRTQAAMML 196 ++ +L V +RTQA + Sbjct: 184 SNILSKLAVSDRTQAVVYA 202 >UniRef50_B2J8J5 Two component transcriptional regulator, LuxR family n=3 Tax=Cyanobacteria RepID=B2J8J5_NOSP7 Length = 211 Score = 207 bits (527), Expect = 2e-52, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 80/194 (41%), Gaps = 1/194 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D I + + LQ I A E + + + ++D Sbjct: 9 IRILLADDHPILGQALTMFLQCESDMTVIGHAGDGREALELFHQHQPDVALMDLRMPKME 68 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + +F ++++ T + + + + + A+ + G Sbjct: 69 GADAIAAICAKFKHARIVVLTTFDGDEDIYRGLRAGAKGYLLKGAEPNELLDAIRTVHKG 128 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 ++P + + + LS R+ E+L ++A G++N++I LNI+ TV+ H ++ Sbjct: 129 QKYIPPTIAAKLAERMSS-EELSDRELEVLRLIAKGKNNQQISNVLNIAESTVRFHTNNI 187 Query: 181 YRRLEVKNRTQAAM 194 + +L V +RTQA + Sbjct: 188 FGKLNVSDRTQALV 201 >UniRef50_B6IU89 Glycerol metabolism activator AgmR n=1 Tax=Rhodospirillum centenum SW RepID=B6IU89_RHOCS Length = 205 Score = 206 bits (526), Expect = 3e-52, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 2/196 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEA-LVMLDGDQDGE 59 M++++ D + ++ +++ PG + G D L + LV+LD G Sbjct: 1 MRLLIADDHDLLRDALRSHIERASPGTEVLGVGSVDAAVTALARHRGIELVLLDLRMPGM 60 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 L + P VKV + + + + ++ + F + +P+ A++ Sbjct: 61 NGLEGLVRLRTSHPGVKVALMSGEASPEDVRAALAFGAVGFLPKTLPGTALVEAISRLVA 120 Query: 120 GMMFLP-GDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLE 178 G F+P G P+ + S + R+RE+L L G SNKEI RAL++ TVK H+ Sbjct: 121 GQTFVPEGAAAPEPDSQLAGGASFTRREREVLDFLLKGCSNKEIARALSLEEVTVKLHVR 180 Query: 179 SLYRRLEVKNRTQAAM 194 L R+L KNRTQAAM Sbjct: 181 GLCRKLGAKNRTQAAM 196 >UniRef50_B9MPQ9 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=B9MPQ9_ANATD Length = 211 Score = 206 bits (526), Expect = 3e-52, Method: Composition-based stats. Identities = 49/203 (24%), Positives = 99/203 (48%), Gaps = 11/203 (5%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQG-ASQADELWQKLESYPEALVMLDGDQDGEF 60 ++++ D + G+KI L+ + + + A E + LE +V++D Sbjct: 5 KVLIVDDNPAVLDGLKIILE--LENFEVVSLCTNAKEAIEFLEKKHADVVLMDIRMPVMD 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +FP VKV+I T C + ++++ + F + + S + ++ S G Sbjct: 63 GIEGTFNIKTKFPNVKVIILTTFCEEDYIKKSLSFGADGYILKSSDAKHIVNSILSVLDG 122 Query: 121 MM--------FLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 + ++ + T ++ ++ ++L+ R+ EI +++ G SNKEI R L IS GT Sbjct: 123 KVVMDKEIALYISDVLKRTSKQLLEKTQNLTERELEIAKLISQGYSNKEIARMLFISEGT 182 Query: 173 VKAHLESLYRRLEVKNRTQAAMM 195 V+ ++ S+ ++L +KNRTQ A+ Sbjct: 183 VRNYITSILQKLNLKNRTQIAVY 205 >UniRef50_B0C955 Two-component transcriptional regulator, LuxR family n=4 Tax=Cyanobacteria RepID=B0C955_ACAM1 Length = 215 Score = 206 bits (526), Expect = 3e-52, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 89/207 (42%), Gaps = 9/207 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D Q++F G+ L+ + A + ++ ++++D Sbjct: 2 IRLLLADDQALFRQGLASLLELEEDLSVVGQAQDGRDAILLTQTLQPDVILMDVRMPICD 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ +FP +++L+ T ++ + L + + + A A+ G Sbjct: 62 GVEATREIHQRFPWIRILVLTTFDEDEYIWTSLQAGALGYLLKSTPASQLAAAIRMLHDG 121 Query: 121 MMFLPGDWRTTPEKDIKD---------LKSLSARQREILTMLAAGESNKEIGRALNISTG 171 L ++ L+ LS R+ ++L ++ G+SN+EI + L+++ G Sbjct: 122 HFQLGPTIAPKVIAQLRPPPLKNEQNHLERLSDRELDVLNLIGQGKSNREISQILHLTEG 181 Query: 172 TVKAHLESLYRRLEVKNRTQAAMMLNI 198 TVK ++ L L V++RTQAA+ Sbjct: 182 TVKNYVSQLLGSLGVRDRTQAALWAQQ 208 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 206 bits (526), Expect = 3e-52, Method: Composition-based stats. Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 11/203 (5%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 +I++ D ++F G++ L A+ A + + +V++D G Sbjct: 5 KILLTDDHTLFRQGVRTLLAAEADMEVAGEAANAMDAVALAQQLRPDVVLMDIGMAGMSS 64 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 + + + PEVKV+ + ++ +L E + + +DS + A+ G Sbjct: 65 FEATRLIRKERPEVKVIFLSMYDDEDYLAECVDMGANGYILKDSPADQLITAIREVQRGG 124 Query: 122 MFLPGDWRTTPEKDIK-----------DLKSLSARQREILTMLAAGESNKEIGRALNIST 170 +L + D + +L+ R+REIL MLA G+S KEI +S Sbjct: 125 SYLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKEIAAFFELSV 184 Query: 171 GTVKAHLESLYRRLEVKNRTQAA 193 TV+AH +L R+L++ N+ Q Sbjct: 185 KTVEAHKFNLMRKLDIHNKAQLV 207 >UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=C4L5Q6_EXISA Length = 230 Score = 206 bits (525), Expect = 3e-52, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 85/214 (39%), Gaps = 21/214 (9%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 +I + D +F G+K + E + ++++D + Sbjct: 7 RIAIVDDHELFREGLKRIFDLEDEFTVVAEGRTGREAIRIAGEQKPEILIMDINMPDMNG 66 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 ++ + PE +VLI + ++ ++ + + ++ AV + A Sbjct: 67 IEATKQLSLLSPETRVLILSIHDDESYITHALEAGASGFLLKEVASTELISAVRAVAKDG 126 Query: 122 MFLPGDWRTTPEKDIKDL---------------------KSLSARQREILTMLAAGESNK 160 +L T K+ + L + LS R+ E+L +LA G SN+ Sbjct: 127 AYLHPKVTTNVLKEYRRLLQFKGEQAGRGVESRTDDPVYQLLSRREVEVLHLLADGRSNR 186 Query: 161 EIGRALNISTGTVKAHLESLYRRLEVKNRTQAAM 194 +I L IS TVK H+ S+ R+++V +RTQA + Sbjct: 187 DISDMLFISEKTVKNHVSSVLRKMDVNDRTQAVV 220 >UniRef50_D1AAU8 Two component transcriptional regulator, LuxR family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AAU8_THECD Length = 220 Score = 206 bits (525), Expect = 4e-52, Method: Composition-based stats. Identities = 44/208 (21%), Positives = 87/208 (41%), Gaps = 11/208 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQG-ASQADELWQKLESYPEALVMLDGDQDGE 59 +++++ D +F G++ L+ GV + G A + Q +V++D G Sbjct: 10 IRVLITDDHPVFRQGLRGLLEAL--GVEVVGEAESGPQAVQLAAELQPDVVVMDLHMPGG 67 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 + P + VL+ + + + + ++S E A AV + A Sbjct: 68 NGIEATRTITRTSPRIGVLVLTMFRDDDSVFAAMRAGARGYLLKESGAEEIARAVRAVAA 127 Query: 120 GMMFLPGDWRTT--------PEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTG 171 G + P+ L+ R+RE+L ++A G SN EI + L +S Sbjct: 128 GEAIYGPEIARRVLTYFADMPDPKQTAFPELTEREREVLQLIAQGRSNGEIAQTLFLSPK 187 Query: 172 TVKAHLESLYRRLEVKNRTQAAMMLNIS 199 TV+ H+ +++ +L V +R QA ++ + Sbjct: 188 TVRNHVSNIFMKLHVADRAQAIVLAREA 215 >UniRef50_A6TVR4 Two component transcriptional regulator, LuxR family n=5 Tax=Firmicutes RepID=A6TVR4_ALKMQ Length = 208 Score = 206 bits (524), Expect = 5e-52, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 92/202 (45%), Gaps = 7/202 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 M++++ D ++ +KI + + AS E ++ + Y L+++D Sbjct: 1 MKVLIVDDDALIRDSLKILIDLEADFTVVGTASNGQEAFEFCKEYAPDLILMDIRMPIMD 60 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + F ++++I T + ++++E + + + + ++ ++ + + G Sbjct: 61 GVLATKMIKESFGSIRIIILTTFKDDQYIKEALKNGAQGYILKSQSADSIIESLRTVSKG 120 Query: 121 MMFLPGDWRTTPEKDIKDLK-------SLSARQREILTMLAAGESNKEIGRALNISTGTV 173 + + + +K+ K L+ R+ EI+ + G SN+EI AL +S GTV Sbjct: 121 NVVFETEIASVLTSMLKEEKEKHHLDLQLTEREHEIIKWVGEGLSNREISAALYLSEGTV 180 Query: 174 KAHLESLYRRLEVKNRTQAAMM 195 + ++ L +L V++RTQ A+ Sbjct: 181 RNYVTQLLEKLNVRDRTQLAIF 202 >UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Tax=Firmicutes RepID=LIAR_BACSU Length = 211 Score = 205 bits (523), Expect = 7e-52, Method: Composition-based stats. Identities = 45/204 (22%), Positives = 94/204 (46%), Gaps = 7/204 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G+ L+ + I AS E + ++++D +G Sbjct: 2 IRVLLIDDHEMVRMGLAAFLEAQPDIEVIGEASDGSEGVRLAVELSPDVILMDLVMEGMD 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ + + K+++ + + + VI L+ + + S A A+ +A+ G Sbjct: 62 GIEATKQICRELSDPKIIVLTSFIDDDKVYPVIEAGALSYLLKTSKAAEIADAIRAASKG 121 Query: 121 MMFLPGDWRTTPEKDIK-------DLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 L ++ +SL+ R+ EIL ++A G++NKEIG L I+ TV Sbjct: 122 EPKLESKVAGKVLSRLRHSGENALPHESLTKRELEILCLIAEGKTNKEIGEELFITIKTV 181 Query: 174 KAHLESLYRRLEVKNRTQAAMMLN 197 K H+ ++ +L+V +RTQAA+ + Sbjct: 182 KTHITNILSKLDVSDRTQAAVYAH 205 >UniRef50_B8FX94 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FX94_DESHD Length = 212 Score = 205 bits (523), Expect = 7e-52, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 87/200 (43%), Gaps = 6/200 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++V+ D + G++ L+ + + ++++D + G Sbjct: 2 IRVVIADDHPLLREGLRRILEFEEGIQVVCEVGDGQGAINVSRTLDFDILLMDLNMPGVN 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + + +L+ D + + +V+ V + +D +T ++ G Sbjct: 62 GLEACRVIRRENETIGILVLTVDDSDEKVFQVLQLGVAGYLLKDVDPKTLIDSIRKVHSG 121 Query: 121 MMFLPGDW------RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVK 174 L + +D LS R+ +ILT + G SN+EIG+AL IS TVK Sbjct: 122 QPILSPAVTGKLLGQLVHPTQNRDTCGLSDRELQILTYVVKGSSNREIGQALFISEKTVK 181 Query: 175 AHLESLYRRLEVKNRTQAAM 194 HL S++R+L V++RTQAA+ Sbjct: 182 NHLSSIFRKLAVEDRTQAAL 201 >UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR family n=89 Tax=Bacteria RepID=C7Q6M6_CATAD Length = 225 Score = 205 bits (523), Expect = 8e-52, Method: Composition-based stats. Identities = 46/204 (22%), Positives = 89/204 (43%), Gaps = 8/204 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G++ L+ + A+ E ++ +++LD G Sbjct: 8 IRVLIADDHRMVRQGLRTFLELQEGIEVAGEAADGAECAERAAELEPDVILLDLVMPGVD 67 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ +VL+ + ++R + I V +D A AV S G Sbjct: 68 GVGAMELLREAGSTARVLVVTSFTDRRMIIPAIRAGARGYVYKDVDPAALAAAVRSVHAG 127 Query: 121 MMFLPGDWRTT--------PEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 + L + T +L+AR+RE+L ++A G +N+EI RAL ++ T Sbjct: 128 HVLLEPEVATALLDSGSNGAADQGPQAPALTAREREVLVLIAQGRANREIARALVLAEKT 187 Query: 173 VKAHLESLYRRLEVKNRTQAAMML 196 VK H+ ++ +L V +RTQAA+ Sbjct: 188 VKTHVSNILMKLGVADRTQAALWA 211 >UniRef50_A4JJ97 Two component transcriptional regulator, LuxR family n=6 Tax=Proteobacteria RepID=A4JJ97_BURVG Length = 213 Score = 205 bits (522), Expect = 8e-52, Method: Composition-based stats. Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 11/202 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPE-ALVMLDGDQDGE 59 M+I++ D I G+ L+Q V++ A AD+ + L+ + ++LD G Sbjct: 1 MKILIVDDHPILRDGVAALLRQNGEDVTVAQAGNADDAMRMLDQSADFDAIVLDLKLPGM 60 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 + + P++++++ +T + ++ L VP+ + T A+ Sbjct: 61 NGLDAISAFAGKCPQLQIIVLSTSEDAADVRAAFARGALGYVPKSAGPHTVLSAIRMVLD 120 Query: 120 GMMFLPGDW----------RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIS 169 G ++P P + L+ RQ E+L +A G NK I LN+S Sbjct: 121 GERYVPPLMLDDSSSAAPGSPRPAPATRSAGPLTQRQIEVLRYVAEGVPNKVIADRLNLS 180 Query: 170 TGTVKAHLESLYRRLEVKNRTQ 191 TVKAH+ ++++ L V NRTQ Sbjct: 181 EKTVKAHVTAIFKALNVLNRTQ 202 >UniRef50_A1SKW0 Two component transcriptional regulator, LuxR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SKW0_NOCSJ Length = 215 Score = 205 bits (522), Expect = 9e-52, Method: Composition-based stats. Identities = 41/195 (21%), Positives = 84/195 (43%), Gaps = 1/195 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + +++ D ++ G + L+Q + A+ ++ + +V++D G Sbjct: 6 IAVLVVDDHTLHRDGTRRILEQYDDVDVVGDAASGEDALAMVNRLHPRVVLMDIRLPGMN 65 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ + P+ +VLI ++ +++ + + + AV + A G Sbjct: 66 GIEATRRIRERHPDTRVLIVTAYDDEEYVRGAFDVGAAGYLSKTAPGRELVEAVRAVAGG 125 Query: 121 MMFL-PGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLES 179 L P K +L+ R+R +L +LA G NK+I L IS TV+ H + Sbjct: 126 NSVLQPTLMAALLAKRSSPANTLTDRERAVLRLLAEGMHNKQIASRLGISARTVERHCDR 185 Query: 180 LYRRLEVKNRTQAAM 194 +Y +L V +RT+A + Sbjct: 186 IYGKLGVTSRTEAVV 200 >UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR family n=10 Tax=Bacteria RepID=Q1IXN1_DEIGD Length = 221 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 94/199 (47%), Gaps = 3/199 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D ++ G+++ L + A+ +E E +V++D Sbjct: 10 VRVLLVDDHAVVRQGLRLFLSLDSQIEVVGEAANGEEALAAAERLHPDVVIMDLMMPVMD 69 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + Q P+ +V+ + + + I + + +D++ +T A A+++AA G Sbjct: 70 GIQATRLLRRQHPDTEVIALTSTLEEHKVNGAIDAGAMGYMLKDASSDTLADAIHAAARG 129 Query: 121 MMFLPGDWRTTPEKDIKDL---KSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHL 177 + L + +D + ++L+ ++ +L ++A G SN++I R ++ TVK H+ Sbjct: 130 EVRLHPEAARRLVRDFRTPEMRETLTPKEVIVLQLIARGYSNRDIARDQGVTEATVKTHV 189 Query: 178 ESLYRRLEVKNRTQAAMML 196 L +L +++RTQAA+ Sbjct: 190 SRLLGKLGLESRTQAALYA 208 >UniRef50_D1C1C8 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1C1C8_SPHTD Length = 237 Score = 204 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 43/205 (20%), Positives = 84/205 (40%), Gaps = 9/205 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + +++ D +F ++ L+ I A Q E + ++++D G Sbjct: 23 ISVLLVDDHVLFRQALRHLLEAEPDIRVIGEAGDGRSAQQLAERFHPDVILMDISMPGVD 82 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + P K++I + I A + ++S A+ + A G Sbjct: 83 GVTATRDLKAGIPNTKIIILTMFAEDGHVIRAIRAGADAYLLKNSESSKVIDAIRAVARG 142 Query: 121 MMFLPGDWRTTPEKDIKDLKS---------LSARQREILTMLAAGESNKEIGRALNISTG 171 + T + + + L+ R+ ++L ++A+G SNKEI L+++ Sbjct: 143 ESVIEPQLATKLLNEFRRISEFREEETVAGLTEREIQLLRLVASGMSNKEIAAELSLAES 202 Query: 172 TVKAHLESLYRRLEVKNRTQAAMML 196 TVK L L+ +L+VK+RTQAA+ Sbjct: 203 TVKNRLSLLFEKLDVKDRTQAAIYA 227 >UniRef50_A5V148 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=A5V148_ROSS1 Length = 216 Score = 204 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 92/205 (44%), Gaps = 8/205 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + I++ + Q++ G++ L + A E ++ ++++D Sbjct: 6 ISILIVEDQTLMRQGLRTILDLEESIRVVGEARDGAEGVREALRLRPDIILMDVQMPVMN 65 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ + + + ++++ T ++ + + + + +D+ E + G Sbjct: 66 GVEAIRAIIAAWSQARIIVLTTFDRDDYVFQSVRAGAMGYLLKDAPAEALLQTIRRVHAG 125 Query: 121 MMFLPGDWRTTPEKDIKDLK--------SLSARQREILTMLAAGESNKEIGRALNISTGT 172 +F+ + + ++ + LS R+RE+L +LA G SN+EI L+I+ GT Sbjct: 126 EVFIQPEIASRTLREAATGRRRAGTIPFDLSEREREVLVLLAQGLSNREIAGRLSITEGT 185 Query: 173 VKAHLESLYRRLEVKNRTQAAMMLN 197 VK H+ ++ +L+ +NRTQAA + Sbjct: 186 VKNHVSNILAKLQAENRTQAANIAR 210 >UniRef50_C1B8T3 NarL family two-component response regulator n=61 Tax=Bacteria RepID=C1B8T3_RHOOB Length = 276 Score = 204 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 2/194 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQ-DGE 59 +++++ D +I G++ L+ + A+ AD + P LV++D G Sbjct: 2 IRLLLADDHAIVRAGLRALLEHEDDIEVVGEAATADAAVALCATTPVDLVLMDLRFGPGT 61 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 + VL+ + + + + +D+ AV +A+ Sbjct: 62 SGVDATRNLRSLPNPPHVLVVTNYDTDADILDAVAAGAAGYLLKDTPPPELLAAVRAASA 121 Query: 120 GMMFL-PGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLE 178 G L P + + SLS R+ ++LT++AAG SN+EIG+ L +S TVK+HL Sbjct: 122 GDSVLSPAVASKLMTRVRRPATSLSPREIQVLTLVAAGRSNREIGKELFLSETTVKSHLV 181 Query: 179 SLYRRLEVKNRTQA 192 ++ +L VK+RT A Sbjct: 182 HIFGKLGVKSRTSA 195 >UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0L7_PELTS Length = 223 Score = 204 bits (520), Expect = 1e-51, Method: Composition-based stats. Identities = 50/206 (24%), Positives = 93/206 (45%), Gaps = 11/206 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +Q+++ D + +++ + + AS +E + + ++++D + Sbjct: 9 IQLLLVDDDPLVRRSLRMLFELH-DINVVGEASNGEEALKAIARLKPTMILMDVNMPKMD 67 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L+ +P+++V+I + + I A V +DS E V S A G Sbjct: 68 GIQALKAIKTNYPDIQVIILTVHNQHEKVVQAIRDGCSAYVLKDSPPEQLIEVVESVAEG 127 Query: 121 MMFLPGDWR----------TTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIST 170 F+ T + K+L L+ R++E+L ++ G SNKEI LNI+ Sbjct: 128 RYFVDTSIANELLVNLVQGTPRRQHPKNLPLLTLREKEVLQLIVNGLSNKEIAGKLNITL 187 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 TVKAH+ S+ +L V +RTQAA++ Sbjct: 188 RTVKAHVSSILMKLNVNDRTQAAVLA 213 >UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria RepID=Q3Z7M1_DEHE1 Length = 232 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 10/202 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + IV+ D I HG+K L+ + AS E +ES +++ D G Sbjct: 2 ISIVLADDHQIVRHGLKALLEAEADFEVVGEASDGIEAVNLVESLQPGVLVTDLMMGGMS 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + V + P+ V+I + N+ ++ E + A V +DST E +V A G Sbjct: 62 GIEVTYQVVKRSPKTAVVILSMYGNEAYVHEALRAGARAYVLKDSTSEELVRSVREAVQG 121 Query: 121 MMFLPGDW----------RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIST 170 +L ++ + ++L+ R+RE+L ++A G + EI L IS Sbjct: 122 HRYLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAERLFISP 181 Query: 171 GTVKAHLESLYRRLEVKNRTQA 192 TV+ H ++ R+L+++N+TQ Sbjct: 182 RTVEVHRANMMRKLDLRNQTQL 203 >UniRef50_A9AX03 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AX03_HERA2 Length = 218 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 87/206 (42%), Gaps = 10/206 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D Q++ G+ I L I AS E Q ++ L+++D Sbjct: 2 IKLLICDDQAVVRDGLSIMLNLAPDLEVIAVASNGREAVQLSATWQPDLILMDLKMPIMN 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ P VK+L+ T + WL E I + +D A+ G Sbjct: 62 GIEATRQISAAQPLVKILVLTTYDDDEWLFEAIRAGAAGYLLKDMAHSDLVSAIRGTVSG 121 Query: 121 MMFLPGDWRTTPEKDIKDLKS----------LSARQREILTMLAAGESNKEIGRALNIST 170 ++ + + ++ L+ R+ +L ++A G +N I L +S Sbjct: 122 KAYVDPNVTARLLSQVATSRNQPPASQLTGRLTERELAVLNLIATGHTNASIAEQLRLSE 181 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 GTV+ H+ ++ +L+V +RTQAA++ Sbjct: 182 GTVRNHVSTILSKLDVADRTQAALLA 207 >UniRef50_C0GHS5 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHS5_9FIRM Length = 219 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 6/206 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I + D + G++ + + A+ +E Q + +V+LD G Sbjct: 4 IKIFIVDDHEVVRLGLQGLFARYEELEIVGEAASGEEAVQVVPVIKPDVVLLDVRLQGIH 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + P +KV++ ++ +Q A V ++ T A+ + G Sbjct: 64 GADTCRLITSAVPGIKVVMLSSFAEPEEVQAAFTAGASAYVLKNITSGNVIKAIKAVMQG 123 Query: 121 MMFLPGDWRTTP------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVK 174 F+ + EK + LS R+ EIL ++ G++NKEIGR L +S TV+ Sbjct: 124 ESFIDPEITEQVMSLIRGEKAASQISGLSKREEEILHLVGEGKTNKEIGRELFLSEKTVR 183 Query: 175 AHLESLYRRLEVKNRTQAAMMLNISS 200 H+ + +L V NR+QAA + S Sbjct: 184 NHVSRILDKLGVSNRSQAAAFMARRS 209 >UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococci RepID=Q9RU37_DEIRA Length = 225 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 97/199 (48%), Gaps = 3/199 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D ++ G+++ L + A+ +E Q+ E +V++D Sbjct: 14 VRVLLVDDHAVVRQGLRLFLGLDEGIEVVGEAANGEEALQEAERLRPEVVVMDLMMPVMD 73 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ + P+ +V+ + + + I ++ + +D++ +T A A+++AA G Sbjct: 74 GITATRELRRRLPDTEVIALTSTLEENKVNGAIEAGAISYMLKDASSDTLADAIHAAARG 133 Query: 121 MMFLPGDWRTTPEKDIKDL---KSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHL 177 + L + +D + +SL+ ++ +L +LA G+SNK+I +S TVK H+ Sbjct: 134 EVRLHPEAARRLVRDFRSPEMRESLTPKETAVLQLLARGQSNKDIAAEQGVSEATVKTHV 193 Query: 178 ESLYRRLEVKNRTQAAMML 196 L +L + +RTQAA+ Sbjct: 194 SRLLSKLGLDSRTQAALYA 212 >UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Actinobacteria (class) RepID=D2AX12_STRRD Length = 239 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 83/210 (39%), Gaps = 11/210 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D Q + G+ + L + A + +V++D Sbjct: 11 IRVLIVDDQPLVRRGLSLILSPDPSFEVVGEAENGAQAVTLARRLRPDVVVMDIRMPVLD 70 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ P+ +VL +T ++ + +P+DS+ E + A+ + G Sbjct: 71 GVGATRELAATVPDCRVLALSTFDLDEYVVGALRAGAYGFLPKDSSPEDLSAAIRTVHAG 130 Query: 121 MMFLPGDWRTTP-----------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIS 169 + T L L+ R+ E+ ++A G N I R L+IS Sbjct: 131 EAAVAPRLLTRLISTYVRAPHGTRPTPTGLGELTPREVEVWRLMATGLDNTGISRTLDIS 190 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 TVK ++ S++ +L V++R QA ++ S Sbjct: 191 LSTVKNYITSIFDKLAVRDRAQAVIVAYES 220 >UniRef50_B9QY19 Sigma-70, region 4 family n=2 Tax=Alphaproteobacteria RepID=B9QY19_9RHOB Length = 234 Score = 203 bits (518), Expect = 2e-51, Method: Composition-based stats. Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 9/205 (4%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYP-EALVMLDGDQDGEF 60 + ++ D +F + +++ P A+ DE Q L+ L +LD G Sbjct: 10 KFLIIDDHPLFREALHSAVELAYPNSDTLDAASLDEANQILQDDAGFDLALLDLSMPGVK 69 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L +P + V++ + + + +V+ + +P+ S T A A+ G Sbjct: 70 GMDGLLHLRTHYPRLPVVVVSGAEDPPIIAQVLAYGAAGFIPKSSKKTTLADAIQQVMNG 129 Query: 121 MMFLPGDWRTTPEKDIKD--------LKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 +++P + E + D L SL+ +Q +L M+ G NK+I L++ T Sbjct: 130 AVYVPETYADGAEDPLDDDTRKMIERLSSLTPQQIRVLQMICNGLLNKQIAYELSVGETT 189 Query: 173 VKAHLESLYRRLEVKNRTQAAMMLN 197 VKAH+ + R+L V +RTQA + +N Sbjct: 190 VKAHVSEILRKLSVSSRTQAVIEVN 214 >UniRef50_UPI00017468E1 two-component response regulator n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017468E1 Length = 210 Score = 203 bits (518), Expect = 3e-51, Method: Composition-based stats. Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 1/193 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D + G+ SL + + A A E ++ +V++D Sbjct: 8 VRILLVDDHFVVRSGLAASLGLEEDLLVVAEAGSAAEALTACAAHTPDVVIMDLQLGEVN 67 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ P +++L+ ++ + I L + + + E A+ + +G Sbjct: 68 GITCTEQLGQAHPGIRILVFSSFARDEDVYRAIRAGALGYLQKSAPREDLLKAIRTVGLG 127 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 +LPGD + + + S R+RE+L +A G SNKEI L +S TVK H+ ++ Sbjct: 128 KRYLPGDIAQRLAERLGRPEP-SPREREVLAQMAKGRSNKEIASVLGLSEETVKRHVSNV 186 Query: 181 YRRLEVKNRTQAA 193 +L ++RTQA Sbjct: 187 LEKLGAQDRTQAV 199 >UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=C7QHJ1_CATAD Length = 222 Score = 203 bits (517), Expect = 3e-51, Method: Composition-based stats. Identities = 44/201 (21%), Positives = 83/201 (41%), Gaps = 8/201 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D I G++ + AS + + +V++D Sbjct: 12 LRLLIVDDHPIVRDGLRGVFDGEDGFEVVGEASDGAQALVRAAESGPDVVLMDLRMPTMG 71 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +++ V+ P V+VL+ T + + I + +D+ E AV +AA G Sbjct: 72 GVEAIRRLRVEQPAVRVLVLTTYDTESDVLPAIEAGATGYLLKDAPREDLIRAVRAAAAG 131 Query: 121 MMFLPGD--------WRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 L +T + +L+ R+ E+L ++A+G +N+E R L IS T Sbjct: 132 QPVLAPTVAQRLMTRVQTPLAEPAPPGDALTERELEVLRLVASGTTNRETARKLFISEAT 191 Query: 173 VKAHLESLYRRLEVKNRTQAA 193 VK HL Y + V++R A Sbjct: 192 VKTHLLHAYAKFGVRDRAAAV 212 >UniRef50_C1TL62 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL62_9BACT Length = 217 Score = 203 bits (517), Expect = 3e-51, Method: Composition-based stats. Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 7/203 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++V+ D +F GMK L+ AS E ++ +V+LD Sbjct: 4 IRMVLIDDHKLFRDGMKKLLEMEPDFSLEGEASDGIEGLALIKRSRPDVVLLDIGMPNLD 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L+++ K + ++R L E+ V V + S A+ S A G Sbjct: 64 GIGLIRELRSTEQNTKFVAITAFNDERKLSELSSVGVHGFVLKSSGRTELLSAIRSVARG 123 Query: 121 MMFLPGDWRTTP-------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 ++ + + L L+ R++E+L LA G SN EI +N+S TV Sbjct: 124 QCYVDPKVAGLLLGAFHKKQDEADMLCDLTDREKEVLFWLAQGLSNLEISAKMNLSEKTV 183 Query: 174 KAHLESLYRRLEVKNRTQAAMML 196 K H+ + ++L++++RTQAA++ Sbjct: 184 KNHVSHILKKLDLRDRTQAAILA 206 >UniRef50_C4RJG1 Two-component system response regulator receiver n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RJG1_9ACTO Length = 264 Score = 202 bits (516), Expect = 4e-51, Method: Composition-based stats. Identities = 41/207 (19%), Positives = 87/207 (42%), Gaps = 8/207 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G++ L+ I A+ E + + +V +D Sbjct: 54 IRVLIVDDHPVVRRGLRTMLEGESWVDGIAEAATCAEAVSSVVADRVGVVAMDVALPDGD 113 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ ++ PE +VL+ ++ + + V +D+ + A+ + A G Sbjct: 114 GVEATRRILLSRPETRVLMLTMADDEDVVNRSLRAGARGYVLKDTDPDVIIDALRTVAGG 173 Query: 121 MMFLPG--------DWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 + L + P + L+ R+R+IL LA GE+N I R +S T Sbjct: 174 GLVLGPRVGPQVLTTLQRQPVELPPPFDRLTPRERDILRHLATGETNARIARRFGLSEKT 233 Query: 173 VKAHLESLYRRLEVKNRTQAAMMLNIS 199 V+ L +++ +L V +R QAA++ + Sbjct: 234 VRNQLSAVFAKLGVTDRVQAALLARDA 260 >UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QSJ5_9RHOB Length = 212 Score = 202 bits (516), Expect = 4e-51, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 87/197 (44%), Gaps = 5/197 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D ++ G++ L + + A+ E + ++++D Sbjct: 5 IRVLLADDHALVRDGIRARLNKVPEIEVVGEATNGREAVKLAHELRPDVLLMDVSMPVMN 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + FPE+ VLI + N +++ V+ + +D + A++S A G Sbjct: 65 GLEAAAEVRKSFPEIAVLILSIYDNSEYVRGVVQAGARGYILKDISAPEMITAISSVASG 124 Query: 121 MMFL-----PGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKA 175 + P T I+D L+ R+R++LT +A G NKE+ ++L IS TV++ Sbjct: 125 GYYFSSAVGPTLVGTATSAPIEDPYGLTDRERQVLTAIAKGLPNKEVAKSLGISVRTVES 184 Query: 176 HLESLYRRLEVKNRTQA 192 H +L ++ KN Q Sbjct: 185 HRLNLREKVGNKNAAQL 201 >UniRef50_UPI0001B502C9 two component LuxR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B502C9 Length = 229 Score = 202 bits (516), Expect = 4e-51, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 88/199 (44%), Gaps = 3/199 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D ++ G+++ L + + E + +V++D Sbjct: 3 LRVLIADDHAVVRQGLRMILGLDNEIKVVGETTNGREAVRLARELCPDVVLMDLLMPVMD 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + PEV+V+ + + + + + + +++ + AV +AA G Sbjct: 63 GVSATAEIRQDIPEVEVVALTSSLDDAMVMGAVRAGAIGFLLKNAEADDLRNAVKAAAAG 122 Query: 121 MMFLPGDWRTT---PEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHL 177 + + + ++ + L+ R+ E+LTMLA G++NKEI R L I TVK ++ Sbjct: 123 QIHVSPAAISRLMGQVREPSGPEQLTERETEVLTMLARGKANKEIARDLRIGQQTVKTYV 182 Query: 178 ESLYRRLEVKNRTQAAMML 196 + +L V +RTQAA+ Sbjct: 183 SHILTKLGVHSRTQAAVYA 201 >UniRef50_D1XHI5 Two component transcriptional regulator, LuxR family n=4 Tax=Streptomyces RepID=D1XHI5_9ACTO Length = 222 Score = 202 bits (516), Expect = 5e-51, Method: Composition-based stats. Identities = 46/205 (22%), Positives = 91/205 (44%), Gaps = 16/205 (7%) Query: 4 VMFDRQSIFIHGMKISLQQRIPGVSIQGAS-QADELWQKLESYPEALVMLDGDQDGEFCY 62 V+ D Q+I G+ + L +PG+ + GA+ DE + +V++D Sbjct: 2 VVADDQAIVREGI-VMLLGLLPGIEVVGAAKDGDEAVALVAEKAPDVVLMDLRMPRCDGV 60 Query: 63 WLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMM 122 ++ + P +V++ T + L + + +D+ E A+++ G Sbjct: 61 EATRRIRKEHPRTQVVVLTTFADDDSLFTALQAGARGYLTKDARGEEIVQAIDAVMSGEA 120 Query: 123 FLPGDWRTTPEKDIKDLKS--------------LSARQREILTMLAAGESNKEIGRALNI 168 L + + + ++ L+ R+ E+L ++A G SN+EI RAL++ Sbjct: 121 GLSPKVQRRLLERVTGSETVPAPCALPSELPDGLTPREAEVLVLIAEGLSNREIARALHV 180 Query: 169 STGTVKAHLESLYRRLEVKNRTQAA 193 S TVK H+ +L+ + ++RTQA Sbjct: 181 SAATVKTHINNLFAKTGARDRTQAV 205 >UniRef50_C3AL44 Response regulator receiver n=3 Tax=Bacillus RepID=C3AL44_BACMY Length = 578 Score = 202 bits (516), Expect = 5e-51, Method: Composition-based stats. Identities = 43/198 (21%), Positives = 82/198 (41%), Gaps = 7/198 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + I++ D Q I ++ L + G + A+ + ++ E +V++D Sbjct: 374 IHILIVDDQPIISDSLEFLLDKY--GFRVSVANSGAQALKQCEERQPNVVLMDIQMPKMN 431 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++K ++P+ K+++ T + E I V + E A+ +G Sbjct: 432 GITTMKKIKNRWPDTKIIMVTTFEETSSVSEAIEAGAEGYVLKSVQPEELVAAIRLVHLG 491 Query: 121 MMFLPGDWRTTPEKDIKDLK-----SLSARQREILTMLAAGESNKEIGRALNISTGTVKA 175 L D T K+ + L+ R+ ++L L G KEI L +S GTV+ Sbjct: 492 GTMLSQDVATRLFKEYSPMPKKPPYELTPREMDVLGCLKEGLRYKEIAAKLFLSEGTVRN 551 Query: 176 HLESLYRRLEVKNRTQAA 193 + S+Y +L+V R +A Sbjct: 552 YASSIYMKLQVSGRGEAV 569 >UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides sp. JS614 RepID=A1SGL7_NOCSJ Length = 213 Score = 202 bits (514), Expect = 7e-51, Method: Composition-based stats. Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 10/203 (4%) Query: 4 VMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCYW 63 ++ D Q +F G+ + L + A E + +V+LD Sbjct: 2 LVVDDQELFRRGLTMLLGTEAGIEVVGEAGDGVEGTNLAATAAPDVVLLDIRMPKRSGIE 61 Query: 64 LLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMF 123 P K+++ + L E + + +DS++E A AV A G Sbjct: 62 ACLAIKEAVPSAKIIMLTVSDEEADLYEAVKSGASGYLLKDSSIEEVAQAVRVVADGQSL 121 Query: 124 LPGDWR----------TTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 + + PE+D L+ R+ E+L ++A G +N+EI + L IS TV Sbjct: 122 ISPSMAVKLIDEFKQMSRPERDHVPGLRLTERELEVLRLVAKGMNNREIAKELFISENTV 181 Query: 174 KAHLESLYRRLEVKNRTQAAMML 196 K H+ ++ +L++ +R +A M Sbjct: 182 KNHVRNILEKLQLHSRMEAVMYA 204 >UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C4B6_LISGR Length = 214 Score = 202 bits (514), Expect = 7e-51, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 87/197 (44%), Gaps = 10/197 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQD-GE 59 M++++ D ++ +K + + I A+ E + +ES +V++D GE Sbjct: 1 MKLLIADDHAVVRSALKFMINAQKDMEVIGDAADGTEAFLFIESNRPDIVLMDLSMPPGE 60 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 ++ FPE KV++ + ++ + + + ++S+ E A+ S Sbjct: 61 NGLLTTKRITEAFPETKVILLTMHDEEAYITQALQAGAQGYIMKNSSEELLLDAIRSVMG 120 Query: 120 GMMFLPG---------DWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIST 170 G + + + + ++ LS R++EIL ++A G NKEI L IS Sbjct: 121 GQIIIDPVFNYSSKQIEQLKRADASENIIERLSKREKEILPLIALGYGNKEIAERLFISA 180 Query: 171 GTVKAHLESLYRRLEVK 187 TV+ H + ++LE+K Sbjct: 181 KTVEVHKSHIMKKLEMK 197 >UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus RepID=A9WA66_CHLAA Length = 218 Score = 202 bits (514), Expect = 8e-51, Method: Composition-based stats. Identities = 46/213 (21%), Positives = 89/213 (41%), Gaps = 15/213 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D Q++ G+ L ++ + A E + + S +V++D Sbjct: 3 IRVLIVDDQALIRTGIATLLSRKADIEVVGQAGNGREALELVASLDPDVVLMDVMMPVMD 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +K + P V++ T + + + I + +D A ++ + A G Sbjct: 63 GVEATRKLAERGPRPAVIMLTTFHDDERVLQSIAAGARGYLLKDVDHRVLADSIRTVAGG 122 Query: 121 MMFLPGDWRTTPEKDIKDLKS---------------LSARQREILTMLAAGESNKEIGRA 165 + + L L+ R+R+IL +LA G +N+EIG Sbjct: 123 GALIHPQIIAQLLPRLASLAPTPVTASSSPSDVTSILTPRERDILRLLAQGYTNQEIGEQ 182 Query: 166 LNISTGTVKAHLESLYRRLEVKNRTQAAMMLNI 198 L +S GTVK HL ++ +L V++RTQAA+ Sbjct: 183 LALSVGTVKNHLSVIFAKLAVRDRTQAALWARE 215 >UniRef50_C5SBA1 Two component transcriptional regulator, LuxR family n=3 Tax=Gammaproteobacteria RepID=C5SBA1_CHRVI Length = 238 Score = 201 bits (513), Expect = 9e-51, Method: Composition-based stats. Identities = 46/208 (22%), Positives = 97/208 (46%), Gaps = 14/208 (6%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGA-SQADELWQKLESYPEALVMLDGDQDGE 59 M++++ D ++F G++ L++R G+ + A ++ +++ +V+LD G Sbjct: 1 MRVLLIDDHALFRFGLQELLERR--GIEVVAAVGESSTGLERVAETRPDVVLLDMRMPGL 58 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 LL++ + + + T +R + + + + +D + A+ Sbjct: 59 NGLELLRRLRAAHQSMPIAMLTTSAEERDVIDSLQSGAQGYLLKDMEPDALIAALGEIVQ 118 Query: 120 GMMFLPGDWRTTPEKDIK-----------DLKSLSARQREILTMLAAGESNKEIGRALNI 168 G + + + ++ L+ R++EIL LA G+SNK I R L I Sbjct: 119 GRTVVASELTGVLARAVRGESTPVPVVSGGAADLTPREQEILCHLAEGQSNKTIARELGI 178 Query: 169 STGTVKAHLESLYRRLEVKNRTQAAMML 196 S GTVK H++++ R+L+V +R +AA++ Sbjct: 179 SEGTVKLHVKAILRKLDVHSRVEAAVIA 206 >UniRef50_D1C3I4 Two component transcriptional regulator, LuxR family n=2 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C3I4_SPHTD Length = 249 Score = 201 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 44/213 (20%), Positives = 91/213 (42%), Gaps = 21/213 (9%) Query: 3 IVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCY 62 +++ D +F G++ +++ + A+ E ++ + + ++ ++D G Sbjct: 13 VLIVDDHPLFRQGLRRLIEEGGAFKVVAEATSGHEAIREADIHRPSIALIDIQLPGVTGL 72 Query: 63 WLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMM 122 + + Q P + ++I + + L E + A + +D + +++ G Sbjct: 73 NVARILKKQHPSMHIIILSMHVDDERLFEAVRAGASAFLTKDIEAQELISSLDRVVQGEQ 132 Query: 123 FLPGDWRTTPEKDIKDLK---------------------SLSARQREILTMLAAGESNKE 161 + + + PE + L LS R+ E+L +A G SNKE Sbjct: 133 LINLEVMSRPELAWRVLSEFRQLTGDDGEAGPASDPKRLPLSVREVEVLDCVAQGLSNKE 192 Query: 162 IGRALNISTGTVKAHLESLYRRLEVKNRTQAAM 194 I AL I+ TVK H+ S+ R+L+V +R QA + Sbjct: 193 IAEALFITEQTVKNHMTSVLRKLQVNDRVQAVL 225 >UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmicutes RepID=VRAR_STAA1 Length = 209 Score = 201 bits (512), Expect = 1e-50, Method: Composition-based stats. Identities = 42/200 (21%), Positives = 88/200 (44%), Gaps = 4/200 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++++ D + G+ L + + + E K L+++D + Sbjct: 3 IKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKPDLILMDLLMEDMD 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + P++KVL+ + + + + V + + + ++ + A AV + G Sbjct: 63 GVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTSRG 122 Query: 121 MMFLPGDW----RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAH 176 + R +K + + L+ R+ EIL ++A G SN+EI A +I+ TVK H Sbjct: 123 ESVFEPEVLVKMRNRMKKRAELYEMLTEREMEILLLIAKGYSNQEIASASHITIKTVKTH 182 Query: 177 LESLYRRLEVKNRTQAAMML 196 + ++ +LEV++RTQA + Sbjct: 183 VSNILSKLEVQDRTQAVIYA 202 >UniRef50_P55184 Uncharacterized transcriptional regulatory protein yxjL n=1 Tax=Bacillus subtilis RepID=YXJL_BACSU Length = 218 Score = 201 bits (512), Expect = 1e-50, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 84/206 (40%), Gaps = 10/206 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++ + D Q + G + + + A ++ + ++++D Sbjct: 6 IRVALADDQPLVREGFRYVINAQTDMTVSGEAGDGHDIIALAKQTKPDVILMDVQMPRCS 65 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + P K++I T + ++ E I + + +D+ E A+ +AA G Sbjct: 66 GIEAAKDIMSALPNTKIVILTTFDTEEYVFEGIRAGAVGYLLKDTLPEELIDAIRAAARG 125 Query: 121 M---------MFLPGDWRTTPEKDIKDL-KSLSARQREILTMLAAGESNKEIGRALNIST 170 + +R + ++L + + R+ E+L +A G N++I L +S Sbjct: 126 EAIFRTVTAAKIISETFRAKQQTHAEELAEPFTKRELEVLQQMAYGLRNEDIAEKLFVSE 185 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 TVK H+ + ++ ++RTQA + Sbjct: 186 STVKTHVHRILQKCNAQDRTQAVVFA 211 >UniRef50_Q5QVF9 Response regulator, LuxR family (CheY, HTH domains) n=3 Tax=Alteromonadales RepID=Q5QVF9_IDILO Length = 216 Score = 201 bits (512), Expect = 1e-50, Method: Composition-based stats. Identities = 52/206 (25%), Positives = 96/206 (46%), Gaps = 10/206 (4%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEA-LVMLDGDQDGEF 60 + ++ D +F MK +L + + I AS +L Q+L+ +P+ LV LD G Sbjct: 3 RAIIADDHPLFRAAMKQALSESLES-DIIEASSFSQLEQQLQQFPQIELVFLDLSMPGNR 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L QFP++ V+I + + + R +++ + +P+ + + AV + G Sbjct: 62 GLTGLSVLRSQFPDILVVIVSANEDTRVIRQAMALGASGYIPKSVPLPEWQTAVTTVLSG 121 Query: 121 MMFLPGDWRTTPEKDIK--------DLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 +LP RT + L+ L+ +Q ++L +A G NK+I L + T Sbjct: 122 DNWLPESMRTVSLTEPDVEMSDFANKLEQLTPQQFKVLQCIADGLLNKQIAYELGVQETT 181 Query: 173 VKAHLESLYRRLEVKNRTQAAMMLNI 198 +K H ++ R+L+ NRTQA ++ Sbjct: 182 IKQHASAILRKLKCVNRTQAGILFRQ 207 >UniRef50_C1I7X4 Two-component system response regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I7X4_9CLOT Length = 226 Score = 200 bits (510), Expect = 2e-50, Method: Composition-based stats. Identities = 43/207 (20%), Positives = 97/207 (46%), Gaps = 11/207 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++ ++ D ++ G+ + + +EL +++Y +++LD + G+ Sbjct: 6 IRTIVVDDHALIREGLNRIISFEEDLIICGQFRSGEELLNNMKNYNPDVILLDINMPGKN 65 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L+ + +P++KV++ + +K+ + E I A + ++S A+ + +G Sbjct: 66 GIETLKTLKILYPDIKVVMLTVENDKKTIMESIDIGADAYILKESAGSEIVNAIRNVYLG 125 Query: 121 MMFLPGDWRTT-----------PEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIS 169 ++ K+I+ LK L+ R+ IL ++ G NKEI L +S Sbjct: 126 EKYIDKSLIKAIFLDIKSDVACKNKEIESLKLLTNRELNILYEISKGLKNKEIAEKLFLS 185 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMML 196 TVK ++ S+++++EV++R QA + Sbjct: 186 EKTVKNYITSIFKKIEVEDRVQATIYA 212 >UniRef50_B8GUD1 Two component transcriptional regulator, LuxR family n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GUD1_THISH Length = 227 Score = 200 bits (510), Expect = 2e-50, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 89/205 (43%), Gaps = 11/205 (5%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 ++++ D ++F G++ L++ ++ + +++LD Sbjct: 4 RVLLIDDHTLFREGLQELLKRHGID-TVGAVGDGETGIDLARDLLPDVILLDMRMPAMNG 62 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 +L++ ++ +++ T ++ L E + + ++ A+ G Sbjct: 63 LEVLRRLRQAGLKMPIVMLTTSTEEQDLVECLRNGAQGYLLKEMEPGDLVDALEEILQGK 122 Query: 122 MFLPGDW----------RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTG 171 + D +++ + L+ R+ EIL +LA G+SNK I R L IS G Sbjct: 123 TVVAPDLAQLLVRVVQGKSSSANEPSPFDELTPREGEILALLAEGQSNKVIARNLGISDG 182 Query: 172 TVKAHLESLYRRLEVKNRTQAAMML 196 TVK H++++ R+L V +R +AA++ Sbjct: 183 TVKLHVKAILRKLGVHSRVEAAVLA 207 >UniRef50_C7MUJ2 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=101 Tax=Bacteria RepID=C7MUJ2_SACVD Length = 239 Score = 200 bits (509), Expect = 3e-50, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 82/209 (39%), Gaps = 14/209 (6%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++V+ D Q + G ++ L + A E + +V++D Sbjct: 21 LRVVLADDQDLVRAGFRVILSSDDGIEVVGEAGDGWEAVEVATRERADVVLMDVQMPKLD 80 Query: 61 CYWLLQKTV----VQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS 116 ++ + P KV+I T + +L E + + ++++ E +V Sbjct: 81 GLEATRRLLGPAGADHP-TKVIILTTFDREDYLFEALRAGASGFLLKNASPEDLIESVRI 139 Query: 117 AAMGMMFLPGDW---------RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALN 167 A G L + + L+ R+ E+L++LA G SN EI R L Sbjct: 140 VARGDALLSPEVTRRVIARFSAPAVTGPTRRPSELTDREFEVLSLLAKGASNAEIARQLV 199 Query: 168 ISTGTVKAHLESLYRRLEVKNRTQAAMML 196 + TVK H+ + +L +++RT A + Sbjct: 200 LGETTVKTHVSRILTKLNLRDRTHAVVFA 228 >UniRef50_A6M052 Two component transcriptional regulator, LuxR family n=8 Tax=Firmicutes RepID=A6M052_CLOB8 Length = 219 Score = 200 bits (509), Expect = 3e-50, Method: Composition-based stats. Identities = 45/215 (20%), Positives = 93/215 (43%), Gaps = 17/215 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + +V+ D Q I G+KI L ++ A +L + L+ ++++D Sbjct: 2 INVVLVDDQQIVREGIKIILSLDNEISILKEAENGKQLLKILQEIQPDIILMDIRMPFMN 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + ++ +KV+I T ++ + I + +D+ ++ +A G Sbjct: 62 GVEATKIVKEKYNNIKVIILTTFNEDEYVLQGIRNGADGYILKDARSHDIIKSIKAAYNG 121 Query: 121 MMFLPGDWRTTP-----------------EKDIKDLKSLSARQREILTMLAAGESNKEIG 163 + L T K K L+ L+ R+ ++ ++A G SNK+I Sbjct: 122 DILLDPAVTTKLIRAFNSISIDKQNSRIINKQKKKLELLTQREMDVAKLVAQGNSNKDIC 181 Query: 164 RALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNI 198 L ++ GTVK +L +++ +LE+ +RT+ A+ +N Sbjct: 182 HTLFLTEGTVKNYLTNIFEKLELSSRTELALFINQ 216 >UniRef50_Q07YA8 Two component transcriptional regulator, LuxR family n=6 Tax=Alteromonadales RepID=Q07YA8_SHEFN Length = 227 Score = 200 bits (509), Expect = 3e-50, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 99/207 (47%), Gaps = 9/207 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEA-LVMLDGDQDGE 59 +++ + D +F + ++Q+ + + A EL +E +P+ L+ +D G Sbjct: 5 IKVAIADDHPLFRAALTQAVQKSVNNAQVLEAENFQELIAIVEQHPDIELIFIDLHMPGN 64 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 + L FP++ V++ ++D +++ I+F A +P+ + + + A++ Sbjct: 65 DGFTGLTLLQNHFPDIVVIMVSSDDQPEIIRKAINFGASAFIPKSANLTQISTAIDIVLE 124 Query: 120 GMMFLPGDWRTTPEKD--------IKDLKSLSARQREILTMLAAGESNKEIGRALNISTG 171 G ++LP + ++ K L L+ +Q +L +A G NK+I LNI Sbjct: 125 GGIWLPEHTNISADQHTAAEHQRLAKQLAQLTPQQYTVLANIANGRLNKQIAYDLNIKET 184 Query: 172 TVKAHLESLYRRLEVKNRTQAAMMLNI 198 TVK H+ ++ +LE+ NRTQA ++ Sbjct: 185 TVKKHVSAILLKLEINNRTQAGLVFQQ 211 >UniRef50_A5URU4 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexi (class) RepID=A5URU4_ROSS1 Length = 242 Score = 200 bits (509), Expect = 3e-50, Method: Composition-based stats. Identities = 45/214 (21%), Positives = 86/214 (40%), Gaps = 18/214 (8%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D +F G++ SL++ + A E + E +V++D + G Sbjct: 5 IRVLIIDDHPLFRQGIRWSLEEAGDMEVVGEAENGQEAIKLAERLVPDVVLVDINLPGLN 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + + P + +++ + + L + I A +D + A G Sbjct: 65 GLEVARVIKRREPRIGLIVISVYEDDDQLFQAIKVGAAAYSSKDVHPRDLVRMIREVARG 124 Query: 121 MMFLPGDWRTTP------------------EKDIKDLKSLSARQREILTMLAAGESNKEI 162 + P E+ L++R+ EIL +A G SNKEI Sbjct: 125 KYLINDSVIAKPHVATRVLHQFRELAATEDERTSALFAPLTSREIEILDCIARGLSNKEI 184 Query: 163 GRALNISTGTVKAHLESLYRRLEVKNRTQAAMML 196 L+IS TVK H+ S+ +L+V +RT A + Sbjct: 185 ASQLSISGQTVKNHITSILSKLQVNDRTMAVIYA 218 >UniRef50_B3RA82 Response regulator protein; Response regulator receiver domain, HTH LuxR domain; higly similar to B. subtilis Transcriptional regulatory protein degU (Protease production enhancer protein) n=1 Tax=Cupriavidus taiwanensis RepID=B3RA82_CUPTR Length = 223 Score = 200 bits (509), Expect = 3e-50, Method: Composition-based stats. Identities = 44/196 (22%), Positives = 84/196 (42%), Gaps = 3/196 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G+++ L+ I A+ +E + LV+ D Sbjct: 5 LRVLLVDDHPFVLDGVRLRLEATGEMTVIGQAASVEEAIVLAGRHAPDLVVSDIHMPDAN 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L + QFP V+V+ + + +++ V A V +++ A+ + A G Sbjct: 65 GLQLAARFAEQFPSVRVIALSMHKDPEYVRRAFALGVAAYVLKEAPAHELVTAIRTVAAG 124 Query: 121 MMFLPGDWRT---TPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHL 177 +L + + T E ++L+ ++ +L +LA G SNKEI L S TV+ H Sbjct: 125 GTYLNAELQAFLHTDEPPPSSRRALTPKEATVLKLLAEGRSNKEIAERLGTSVRTVETHR 184 Query: 178 ESLYRRLEVKNRTQAA 193 L R+L V R + Sbjct: 185 LHLRRKLRVGGRAELV 200 >UniRef50_C7R398 Two component transcriptional regulator, LuxR family n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R398_JONDD Length = 230 Score = 199 bits (508), Expect = 3e-50, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 88/211 (41%), Gaps = 13/211 (6%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 +I++ D ++ G+++ L + + +E ++ +V++D Sbjct: 10 RIIIVDDDALVRAGLRMILGGDPGITVVAEGTHGEEAVSLYAAHQPDVVLMDIRMPVRDG 69 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 + V ++P VL+ T ++ + + + +D++ AVN A G Sbjct: 70 LSATKDIVTRWPHANVLVLTTFDTDEFIVKALRAGARGFLLKDTSPPDLVRAVNLAGDGH 129 Query: 122 MFLPGDWRT-------------TPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNI 168 L + + ++ L+ R+ ++ +A G+SN+EI + L + Sbjct: 130 PTLSPSVTAQLIAKVSEEPDTGRQRQARRMVEQLTERELDVAQQIAQGKSNQEISQTLYM 189 Query: 169 STGTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 S TVK H+ ++ + +V NR Q A+ ++ + Sbjct: 190 SIPTVKTHISRIFTKFDVDNRVQIAIRMHDA 220 >UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU8_DESAH Length = 219 Score = 199 bits (508), Expect = 4e-50, Method: Composition-based stats. Identities = 42/203 (20%), Positives = 86/203 (42%), Gaps = 11/203 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ + +I G+ L + A E + +E +V++D Sbjct: 4 IKVLVAEDHTIVRKGLCSLLYSEPDIEVVGEAENGREAIKMVEELAPDVVLMDISMPELN 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ ++P+VK+LI + + ++ E + + + S A+++A G Sbjct: 64 GMDATRQLKKKYPDVKILILSMHSTEEYIFETLRAGASGYLIKRSAPTDLIKAIHAAHAG 123 Query: 121 MMFLPGDWRTTPEK-----------DIKDLKSLSARQREILTMLAAGESNKEIGRALNIS 169 FL K + + L LSAR+RE+L ++A G +N+EI L IS Sbjct: 124 DCFLSPSISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANREIAGHLYIS 183 Query: 170 TGTVKAHLESLYRRLEVKNRTQA 192 TV+AH + ++L + + Sbjct: 184 PKTVEAHRNHIQKKLGLNGTAEL 206 >UniRef50_Q7NN43 Two-component response regulator n=2 Tax=Gloeobacter violaceus RepID=Q7NN43_GLOVI Length = 217 Score = 199 bits (508), Expect = 4e-50, Method: Composition-based stats. Identities = 44/204 (21%), Positives = 91/204 (44%), Gaps = 8/204 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ + +F G+ + L+ + + A + + LV+LD G Sbjct: 5 VRVLLVEDDPLFRMGLAMVLRHQPQIELVAEAEDGETALALANRHRPQLVLLDIGLPGLD 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L + + PE++VL+ + +Q ++ + + + + G Sbjct: 65 GRQTLVRLKQEHPEIRVLVLTSREEAGLVQAMLQAGADGYCLKGIGPDRLLTVIREVSAG 124 Query: 121 MMFLPG--------DWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 + + P + + +L+ R+RE+L +A G SN EIGR L+IS+GT Sbjct: 125 NGWFDAKVLAQVRSAFAVAPSEPPANAAALTEREREVLGWIARGASNPEIGRQLHISSGT 184 Query: 173 VKAHLESLYRRLEVKNRTQAAMML 196 V+ H+ ++ R+L +RTQAA++ Sbjct: 185 VRVHVHAILRKLGATDRTQAAVLA 208 >UniRef50_UPI0001788591 two component transcriptional regulator, LuxR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788591 Length = 202 Score = 199 bits (507), Expect = 4e-50, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 91/196 (46%), Gaps = 1/196 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 M I++ D + +++ L + A+ Q E +V++D G Sbjct: 1 MNILIVDDDPLVCQSLRLLLSREADMEVTATANDGAAAIQCCEEVLPDIVLMDIRMPGMD 60 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ ++P+V++++ T ++ ++ + + + + V + A + + A G Sbjct: 61 GIQAARQIKQKWPQVQIMMLTTFQDEHSIRLALLAGAEGYMLKSTQVSSMAQQLRALASG 120 Query: 121 MMFLPGD-WRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLES 179 + + +T + ++ L+ R+ +IL ++A G SN+EI L IS GTV+ L Sbjct: 121 SSVVDANVLKTLMLPEKENRSDLTPRENDILELVALGCSNREIAEQLFISEGTVRNTLSI 180 Query: 180 LYRRLEVKNRTQAAMM 195 + +LE+++RTQ A+ Sbjct: 181 ILDKLELRDRTQLAIY 196 >UniRef50_UPI0001789139 two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=UPI0001789139 Length = 216 Score = 199 bits (507), Expect = 4e-50, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 90/209 (43%), Gaps = 15/209 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQ-ADELWQKL-ESYPEALVMLDGDQDG 58 + +++ D +K L P + + ++ +E L + +V++D Sbjct: 2 ISVLIADDDPFIRESLK-LLVGMDPDIEVSAVAEHGEEALSLLMDGLHADVVLMDIRMPV 60 Query: 59 EFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAA 118 ++ ++P+V+VL+ T + ++ E + + ++ + + + Sbjct: 61 CDGVEGTRRIRERYPDVRVLMLTTFDDDDYIVEALRNGASGYLLKNIPPDRIIQGIKTVH 120 Query: 119 MGMMFLPGD--------WRTTPEKDIKDLK----SLSARQREILTMLAAGESNKEIGRAL 166 G M + D R TP+ + + L+ ++ ++ ++A G SNKEI L Sbjct: 121 DGNMLIHPDIARKLTGMLRPTPQPVPRSAELEQFGLTPAEKRVVALIAEGLSNKEIAAQL 180 Query: 167 NISTGTVKAHLESLYRRLEVKNRTQAAMM 195 +S GTVK ++ + +L +++RTQ A+ Sbjct: 181 YLSEGTVKNYVTEILGKLNLRDRTQIAIF 209 >UniRef50_B1ZU87 Two component transcriptional regulator, LuxR family n=4 Tax=Verrucomicrobia RepID=B1ZU87_OPITP Length = 212 Score = 199 bits (507), Expect = 5e-50, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 85/196 (43%), Gaps = 2/196 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D + G+ + + E + ++ +V+LD G Sbjct: 10 IRILLVDDHMVMRMGLVTATSDEPDMEVVADVENGAEAIEAYRAHRPDVVVLDLRMHGMS 69 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ +F V+VL+ + + + + V ++ +E A+ G Sbjct: 70 GVDAIRALRSEFGNVRVLVYSNYAAGEEVYQALKAGASGFVVKEMALERLLEAIRKVHAG 129 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 ++P + + + + LS R+ ++L ++A G SNKEI L++ GT K H+ ++ Sbjct: 130 EQYVPPEIAMRMGERL--MAQLSPRELDVLKLVAKGRSNKEIAAELHVVEGTAKIHVANI 187 Query: 181 YRRLEVKNRTQAAMML 196 +L V +RTQA ++ Sbjct: 188 LTKLGVSDRTQAIVVA 203 >UniRef50_C5V3Z0 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3Z0_9PROT Length = 215 Score = 199 bits (507), Expect = 5e-50, Method: Composition-based stats. Identities = 52/204 (25%), Positives = 100/204 (49%), Gaps = 8/204 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPE-ALVMLDGDQDGE 59 M+I+M D ++F GM+ LQQ + + + E + + +PE LV+LD + G Sbjct: 1 MKILMADDHALFRDGMRYVLQQLSDTLELLEVNNFPECLKVVAQHPELDLVLLDLNMPGS 60 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 + +FP + V++ + D +++V+ + + + ST A+ Sbjct: 61 EGARSVSYFHQRFPRIPVVVVSGDDALANMEKVMDYGASGFICKSSTSHAMLAALKRVLS 120 Query: 120 GMMFLPGDW---RTTPEKDIKDLKS----LSARQREILTMLAAGESNKEIGRALNISTGT 172 G +++P + R+ D + + + L+ RQ E+L + AG SNKEI +++ GT Sbjct: 121 GEIYVPPEIFRQRSVQAVDKRSMHTNGYGLTPRQMEVLEHICAGMSNKEIASHTHLAEGT 180 Query: 173 VKAHLESLYRRLEVKNRTQAAMML 196 VK H+ ++Y+ L+V R +A + Sbjct: 181 VKIHVAAVYQTLKVNGRLEAVRVA 204 >UniRef50_A3CKH3 Two-component system transcriptional regulator (CheY domain and HTH-like DNA-binding domain), putative n=30 Tax=Bacteria RepID=A3CKH3_STRSV Length = 227 Score = 199 bits (506), Expect = 5e-50, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 89/210 (42%), Gaps = 14/210 (6%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D Q++ ++I L + E+ +KL ++++D Sbjct: 2 IKVLIADDQALIRESLQIILSAHADIEVVGTVGDGKEVLEKLHRVRPDVILMDIRMPVMD 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + Q+P+VK++I T + ++ + + + + + E A+ + G Sbjct: 62 GVLCTKAVKEQYPDVKIIILTTFDDDEFIFSALKYGASGYILKGVSTEELHEAIQTVYRG 121 Query: 121 MMFLPGDWRTTPEK--------------DIKDLKSLSARQREILTMLAAGESNKEIGRAL 166 + + T K ++++ +S + +I+ + G SNKEI L Sbjct: 122 GAMINPNIATKVFKIFSQMAQSNFAITVTEENIEDMSRTEWKIIQQIGFGISNKEIAAKL 181 Query: 167 NISTGTVKAHLESLYRRLEVKNRTQAAMML 196 +S GTV+ +L + +L +++RTQ A+ Sbjct: 182 FLSEGTVRNYLSGILAKLNLRDRTQLAIWA 211 >UniRef50_C7MN84 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MN84_CRYCD Length = 215 Score = 199 bits (506), Expect = 5e-50, Method: Composition-based stats. Identities = 39/206 (18%), Positives = 79/206 (38%), Gaps = 10/206 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQD-GE 59 + + + D ++ G + + + A+ E + + +++LD GE Sbjct: 2 IDVAIADDHAVVRQGFAFIINSQCDMRVVGEAADGKEAYDLVARVEPHVLLLDISMPPGE 61 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 ++ FP +++I +L + V ++S+ E A+ A Sbjct: 62 NGLIACERISCDFPSTRIIILTMFEETDYLFYTLRGGAAGYVLKNSSTEVLLGAIRKVAT 121 Query: 120 GMMFLPGDWRTTPE---------KDIKDLKSLSARQREILTMLAAGESNKEIGRALNIST 170 G ++ + + LS+R+ EI ++LA G +NKE L IS Sbjct: 122 GETYIEPNMAQALSGKLHGQSGVAEKNPYHELSSREFEIFSLLAQGYTNKEAADKLFISV 181 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 TV+ H +Y +L V +R + + Sbjct: 182 KTVETHRSKIYAKLGVNSRAELVHLA 207 >UniRef50_A7NQF6 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NQF6_ROSCS Length = 221 Score = 199 bits (506), Expect = 6e-50, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 85/197 (43%), Gaps = 4/197 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++V+ D + + G++ L++ + + A+ + L +E +V++D Sbjct: 8 IRVVLADDHELVLEGLRGLLERESDMIVVATATDGESLLAIIERERPDVVVMDLAMPTRD 67 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L++ + VKV+I + LQ + + + A G Sbjct: 68 GLSCLREIRRRGMPVKVVILTAFGDGGALQSAWEMQADGFALKTDPPRQTIATIRNVAHG 127 Query: 121 MMFLPGDWRTTPEKDIKD----LKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAH 176 + P R + L L+ R+R++L +LA G N +I L + TVK H Sbjct: 128 QIVFPRVVRQAADATQAHGQSLLARLTQRERDVLRLLAEGMPNAQIAERLVVQESTVKYH 187 Query: 177 LESLYRRLEVKNRTQAA 193 L++++++L V NRT+AA Sbjct: 188 LQNIFQKLGVTNRTEAA 204 >UniRef50_A5V445 Two component transcriptional regulator, LuxR family n=2 Tax=Sphingomonas RepID=A5V445_SPHWW Length = 252 Score = 199 bits (506), Expect = 6e-50, Method: Composition-based stats. Identities = 45/203 (22%), Positives = 94/203 (46%), Gaps = 7/203 (3%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPE-ALVMLDGDQDGEF 60 +I++ D + G++ + G I A+ DE LE L++LD + Sbjct: 41 RILIIDDHPLVRDGLRSVIAVTFDGCEIFEAASMDEALATLEKQSNFDLILLDLNIPDVK 100 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L+ ++P + V++ + ++ +QE + +P+ A++ G Sbjct: 101 RLDGLRLLRSRYPILPVVMVSGAFDRAIIQEALGAGAAGFIPKSMKRSLIVDALHRIVSG 160 Query: 121 MMFL------PGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVK 174 ++L P + + ++ ++SL+ +Q+ +L L G NK+I L++S TVK Sbjct: 161 EIYLPAAIGEPAEIASEEADILQRIESLTPQQKTVLVQLVNGRLNKQIAHDLSVSMTTVK 220 Query: 175 AHLESLYRRLEVKNRTQAAMMLN 197 AH+ ++ +++ V +RTQA + N Sbjct: 221 AHVSAILQKMGVFSRTQAVIKAN 243 >UniRef50_Q2SQ58 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQ58_HAHCH Length = 207 Score = 199 bits (506), Expect = 7e-50, Method: Composition-based stats. Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 3/195 (1%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPE-ALVMLDGDQDGEF 60 + V+ D IF G+K+ + P I A+ E+++ L + + LV+LD Sbjct: 4 RFVITDDHGIFRSGLKLIISGLYPDAEILEAASGSEVFRLLNANTDVDLVLLDLSMPDSQ 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 LL+K +F + + +Q I L VP+ S+ A A+ G Sbjct: 64 GLELLRKLKQEFVMTPFAVISASEEAALIQGAIQLGALGYVPKSSSNAVIASAIQLMLSG 123 Query: 121 MMFLPGDWRTTPEKDIKDLKS--LSARQREILTMLAAGESNKEIGRALNISTGTVKAHLE 178 +++P + T + L+ RQ E+L +LA G SNK+IG L+I+ GT+KAH+ Sbjct: 124 GVYIPHELLRTGHDEGMPTGDICLTPRQHEVLGLLAEGMSNKQIGTKLSIAPGTIKAHIA 183 Query: 179 SLYRRLEVKNRTQAA 193 +++R L NRTQA Sbjct: 184 AIFRELNAANRTQAV 198 >UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V5Y3_9FIRM Length = 223 Score = 199 bits (506), Expect = 7e-50, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 92/212 (43%), Gaps = 16/212 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D ++ G+K L + A E + +++LD + G Sbjct: 3 IRILLADDHALLRQGIKRVLNFEDDLEVVGEAEDGQEALARTLMLKPDILLLDINMPGLT 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + ++ VK++ + ++ E++ L + +D A++ G Sbjct: 63 GLDVAKQLKQARSRVKIIALTIHDSDNYVLELLKNGALGYLLKDVEPNVLIKAIHMVNEG 122 Query: 121 MMF--------------LPGDWRTTPEK--DIKDLKSLSARQREILTMLAAGESNKEIGR 164 F + GD ++ D + L+ R+ ++L +A G SN++IG+ Sbjct: 123 NPFVYPKLAERLFGTSSISGDVGRMAKEIWDESRGERLTPREMDVLGCIAKGLSNQDIGK 182 Query: 165 ALNISTGTVKAHLESLYRRLEVKNRTQAAMML 196 AL +S TVK HL S++ +L+V +RTQA + + Sbjct: 183 ALGLSEKTVKNHLTSVFHKLKVNDRTQALVYV 214 >UniRef50_C0GJ72 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ72_9FIRM Length = 212 Score = 198 bits (505), Expect = 7e-50, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 81/198 (40%), Gaps = 5/198 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D S+ G+++ L+ A +++LD Sbjct: 5 IKVMLVDDHSVVRQGLRLLLELDDTMEVCGEAETLTGAVAVCAEVAPDVILLDFKLPDGD 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 QFP+VK++I + + E I + ++ E + + G Sbjct: 65 GIIGCGNLKRQFPQVKIIILTAYADDHLVTETIKAGADGYLLKNVESEELINTIQAVHKG 124 Query: 121 MMFLPGDWRTTP-----EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKA 175 L + K +L+ ++ +IL M++ G++NKEI + IS TV+ Sbjct: 125 QSVLDPSVTEILFDNIKSQQPKKEHNLTPKEVQILDMISVGKANKEIAEIMKISDKTVRN 184 Query: 176 HLESLYRRLEVKNRTQAA 193 ++ ++ ++L V NRT+AA Sbjct: 185 YVSNILQKLNVSNRTEAA 202 >UniRef50_B9XAM6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=B9XAM6_9BACT Length = 209 Score = 198 bits (505), Expect = 7e-50, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 80/196 (40%), Gaps = 1/196 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D + G+ + + A+ + + L ++D + Sbjct: 7 IRILIADDHYVVRMGLIALVNTEPDMEVVAEAADGAQALELFAKCNPDLALMDLRMPVKS 66 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + +F VL+ + + + V + ST E A+ + A G Sbjct: 67 GVQATLEIRNRFATACVLMLTAFDGDEDIHKALQAGAQGYVLKSSTGEKLIPALRAVAAG 126 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 ++P + + LS R+ ++L+ LA G +NKEI LNI+ T K HL+S+ Sbjct: 127 QRWIPKEVANRLALR-NSFEQLSPREVQVLSELARGLANKEIADVLNITEHTTKDHLKSI 185 Query: 181 YRRLEVKNRTQAAMML 196 +L V +RT+A + Sbjct: 186 LAKLRVADRTEAVTVA 201 >UniRef50_Q027R2 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q027R2_SOLUE Length = 247 Score = 198 bits (505), Expect = 7e-50, Method: Composition-based stats. Identities = 44/216 (20%), Positives = 86/216 (39%), Gaps = 20/216 (9%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++IV+ D IF G+ L + A ++ L+ + +++LD G Sbjct: 23 IRIVVADDHPIFRDGLCRLLALEEDFEVVAQAQDGRQVLDVLQQHEPDILLLDLKMPGLD 82 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 LQ+ + + +V++ +K + + IV + + E ++ G Sbjct: 83 GLATLQRLQIAKNKTRVIVLTASDDKNEFVQAMKLGTSGIVLKQTATELLIKSIRKVHAG 142 Query: 121 MMFLP--------------------GDWRTTPEKDIKDLKSLSARQREILTMLAAGESNK 160 ++L P ++ LS R+REI+ ++A G NK Sbjct: 143 EIWLDSHTTAAVIRQFVANDETPAMAAPSQAPPTRERERSPLSQREREIVALVAQGFKNK 202 Query: 161 EIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMML 196 E+ + IS TVK HL +++ +L V +R + A+ Sbjct: 203 EMAEKMFISEQTVKNHLHNIFDKLGVSDRLELALYA 238 >UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=C6E2Z1_GEOSM Length = 216 Score = 198 bits (505), Expect = 8e-50, Method: Composition-based stats. Identities = 42/201 (20%), Positives = 86/201 (42%), Gaps = 9/201 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D SI G++I L++ + A + + +V++D G Sbjct: 2 IKVMVVDDHSIVREGIRILLERFPDLSVVAEADNGRKASELAADLAPHVVLMDMTMPGLN 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 Q+ + PEV+VLI + +KR++ + + +D AV A G Sbjct: 62 GIDATQRLLAACPEVRVLILSMHKDKRFVSQAFRAGARGYLLKDCASAELVQAVRQVACG 121 Query: 121 MMFLPGDW---------RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTG 171 M++ PE + L+ R+RE+L ++A G + K LNI+ Sbjct: 122 EMYVCHGIIGVVVHDYVTRLPESLTQPEVPLTPREREVLQLIAEGNNAKNAAYQLNINVK 181 Query: 172 TVKAHLESLYRRLEVKNRTQA 192 TV H + + ++L++++ + Sbjct: 182 TVDTHRQQIMKKLKMRSVAEL 202 >UniRef50_A4U0R2 DNA-binding response regulator, LuxR family n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U0R2_9PROT Length = 228 Score = 198 bits (505), Expect = 8e-50, Method: Composition-based stats. Identities = 53/217 (24%), Positives = 85/217 (39%), Gaps = 18/217 (8%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEA-LVMLDGDQDGE 59 MQI++ D + G+K L + I A+ E + P L++LD G Sbjct: 1 MQILVADDHKLVRDGLKPFLHELDASAEILDAANLGEALSVGATAPSLGLILLDLMMPGM 60 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 L+ QFP V V+I + + + + +P+ + A+ Sbjct: 61 DGLKGLESVRKQFPNVPVVIVSGFSTREHVVAAVQAGASGFIPKTVSGTAMVNALRLVLS 120 Query: 120 GMMFLPGD--------------WRTTPEKD---IKDLKSLSARQREILTMLAAGESNKEI 162 G +LP + P + LS R+ EIL +L G +NKEI Sbjct: 121 GEKYLPSSSFFEDVTVHMPMMPLQQRPTRTGEIPAPFDKLSRRESEILALLVEGRTNKEI 180 Query: 163 GRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 AL + T+K HL ++YR++ NR QA + S Sbjct: 181 AIALELQEITIKVHLRNVYRKIGAANRAQAVRIAMSS 217 >UniRef50_C6BTX3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTX3_DESAD Length = 217 Score = 198 bits (505), Expect = 9e-50, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 78/205 (38%), Gaps = 9/205 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D I G++ L + A+ E + ++++D Sbjct: 5 IKVLLVDDHDIVRIGVRSFLGSFDDIKVVGEAANGQEAVEMTAELSPDIILMDMLMPVMD 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +++ + +++ + L I + + +DST + A+ G Sbjct: 65 GIQAIREIRDRKLPGRIIALTSFATDDKLFPAIKAGAMGYLLKDSTPDELLEAIRRVHRG 124 Query: 121 MMFLPGDWRTTP---------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTG 171 L D + + L+ R+ + L ++A G+SNK I + +S Sbjct: 125 EPSLAPDIARKVLSELSQPGEDSETPTPDPLTPRELDTLKLVAKGKSNKAIAEEMFVSEA 184 Query: 172 TVKAHLESLYRRLEVKNRTQAAMML 196 TV+ H+ S+ +L + NR +A + Sbjct: 185 TVRTHMTSILSKLHLANRVEATLYA 209 >UniRef50_C5T9P3 Two component transcriptional regulator, LuxR family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9P3_ACIDE Length = 239 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 81/198 (40%), Gaps = 5/198 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D + G+++ L+ A+ E + +V+ D Sbjct: 5 IRILLVDDHPLVRDGVRMRLEATEHICVAGEAASVGESLPLAHALAPDIVLTDIRMPAAS 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L QFP V+VL+ + + +++ + V +D+ + A+ + G Sbjct: 65 GIHLAAVFREQFPRVRVLVLSMHDDAEYVRRAVSLGARGYVLKDAPAQQLIEAIEAVHQG 124 Query: 121 MMFLPGDWRTTPEKD---IKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHL 177 + + + +SL+ R+ +L ++ G SNKEI + S TV+ H Sbjct: 125 GCYFSPGLEQLLDDAGSVARSNRSLTPREASVLQWVSEGRSNKEIAALMGTSVRTVETHR 184 Query: 178 ESLYRRLEVKNRTQAAMM 195 L R+L ++ QAA+M Sbjct: 185 LHLRRKLRIEG--QAALM 200 >UniRef50_C5B7B5 Nitrate/nitrite response regulator protein NarP n=13 Tax=Gammaproteobacteria RepID=C5B7B5_EDWI9 Length = 215 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 84/197 (42%), Gaps = 3/197 (1%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 ++++ D + G++ L+ + AS E L++LD + G Sbjct: 12 RVMIVDDHPLMRRGVRQLLELDSVFSVVAEASNGSEAIALAGRSQPDLILLDLNMKGLSG 71 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 L+ + + +++I + + ++ + + +DS E + AA G Sbjct: 72 LDTLKALRSEGIDARIIILTVSDARSDVYALVDAGADSYLLKDSEPEALLAQIRQAAEGR 131 Query: 122 MFLP---GDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLE 178 + +T + L L+ R+ ++L + G SNK+I L+IS TVK H+ Sbjct: 132 SVFSESVSAYLSTRSEIADPLADLTERELDVLQEVVRGMSNKQIAAQLHISEETVKVHIR 191 Query: 179 SLYRRLEVKNRTQAAMM 195 +L R+L V++R A ++ Sbjct: 192 NLLRKLNVRSRVAATVL 208 >UniRef50_B1KE04 Two component transcriptional regulator, LuxR family n=2 Tax=Alteromonadales RepID=B1KE04_SHEWM Length = 206 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 43/190 (22%), Positives = 86/190 (45%), Gaps = 3/190 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 M+I + D IF G+ L V + A+ E +K+ + +V++D Sbjct: 1 MRIFIVDDHPIFREGLIARLSMDDDFVIVGQAANGKEALEKMPNLMPDIVLMDISMPEMN 60 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + +FPE+K+LI + +K ++ V++ V +D + A+ G Sbjct: 61 GMDAAEIFKDKFPEIKILILSMHDDKEYVLSVLNRGVRGYALKDISAAEMFYALRVIHNG 120 Query: 121 MMFLP---GDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHL 177 ++ D ++ L+ R++ +L +LA+G +NKE+ R L+IS T++ H Sbjct: 121 GIYYSRAISDLLVQSSQEPDKNTVLTTREQTVLRLLASGLNNKELARELDISVRTIETHR 180 Query: 178 ESLYRRLEVK 187 ++ +L +K Sbjct: 181 RNIKDKLAIK 190 >UniRef50_A3Y678 Response regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3Y678_9GAMM Length = 207 Score = 197 bits (503), Expect = 1e-49, Method: Composition-based stats. Identities = 45/197 (22%), Positives = 96/197 (48%), Gaps = 1/197 (0%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 +++ D +F +K++L +S++ + Q+L +++LD Sbjct: 3 NVLIADDHPLFRSALKVTLSGVEEDISLEETGGFKDTLQQLVRSDMDMLLLDLKMPDSEG 62 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 L K +FP++ +++ + + + + ++EV LA + + + +E ++S G Sbjct: 63 LLGLIKLRSRFPQLAIVVISANEDPQIIKEVKAAGALAYINKSTPLEEIQSIISSVLKGN 122 Query: 122 MFLPG-DWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 P T + + + L+ +Q +LTM+A G+ NK+I LN+ TVK H+ + Sbjct: 123 CHFPKWTSENTVDTVSEKIAQLTPQQFRVLTMIAKGDLNKQIAYQLNVKESTVKTHISEI 182 Query: 181 YRRLEVKNRTQAAMMLN 197 +++L + NRTQAA+ + Sbjct: 183 FKKLGIINRTQAALFVQ 199 >UniRef50_Q2W3K4 Response regulator n=2 Tax=Magnetospirillum RepID=Q2W3K4_MAGSA Length = 211 Score = 197 bits (503), Expect = 1e-49, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 95/206 (46%), Gaps = 10/206 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPG-VSIQGASQADELWQKLESYPE-ALVMLDGDQDG 58 M++++ D ++F G+++ L+ + I A +++ + + + +LD G Sbjct: 1 MKVLLADDHALFREGVRMVLESLSNEPLDIVEACDFNQVLTLVRGNADFDVALLDLSMPG 60 Query: 59 EFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAA 118 + + P++ +++ + + +++ + + + + + + S Sbjct: 61 MDGFSAIGAVRRSAPDIYLVVVSASEEPQTVRKALDSGAHGYICKSAGSASMMAGIRSVL 120 Query: 119 MGMMFLPGDWRT--TPEKDIKDLKS------LSARQREILTMLAAGESNKEIGRALNIST 170 G F+ T I D+ L+ RQR++L ML G+SNKEI R L+++ Sbjct: 121 EGDTFVSPHIVVPDTAAPSIGDINGEQLQSLLTPRQRDVLGMLRQGKSNKEIARDLSLAE 180 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 TVK H+ ++ R L +NRTQAA++ Sbjct: 181 ITVKLHVTAILRALGCENRTQAAILA 206 >UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexaceae RepID=A9WKI8_CHLAA Length = 209 Score = 197 bits (503), Expect = 1e-49, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 87/199 (43%), Gaps = 3/199 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDG-E 59 +++ + D SI G+ L + V + A+ + Q ++ ++++D G Sbjct: 4 IRVALVDDHSIVRRGLSAYLAAQPDIVVVGEAANGESALQMASTWQADVIVMDVLMPGGI 63 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 ++ P ++I + + + + + + ++S E A+ A Sbjct: 64 DGIETTRQLKRLIPHTHIIILSGYADDARVIGALRAGAITYIEKESQPEQLLEAIRGAMA 123 Query: 120 GMMFLPGDW--RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHL 177 G L R + K +L+ R+RE+L ++A G +N EI L +S TVK H+ Sbjct: 124 GKAVLAPALMQRILEAQTSKAADTLTEREREVLKLVAEGLTNAEIASRLTVSEETVKTHV 183 Query: 178 ESLYRRLEVKNRTQAAMML 196 S+ R+L + +RTQAA+ Sbjct: 184 ASILRKLGLAHRTQAAIYA 202 >UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJD7_9MICO Length = 207 Score = 197 bits (503), Expect = 1e-49, Method: Composition-based stats. Identities = 43/201 (21%), Positives = 90/201 (44%), Gaps = 3/201 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++ + D + G++ L+ + A E +++ +V++D Sbjct: 2 IRVYLVDDHQLVRAGVRTLLESDPGLSVVGEARDGQEAVAGIDAAASDVVLMDLSMPVMD 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + P+ +VL+ + ++ ++EV+ + V +D+ AV++AA G Sbjct: 62 GVEATRAILSTHPDTRVLVLTSFSDRERVKEVLAAGAIGYVLKDAEPADLLAAVHAAARG 121 Query: 121 MMFLPGDWRTTPEKDIKDLK---SLSARQREILTMLAAGESNKEIGRALNISTGTVKAHL 177 + + LS R+ ++L ++A G +NK++ RAL I+ TVKAHL Sbjct: 122 EVPIDPRVAGALLPSAGGPSVADRLSPRETQVLRLVAQGLANKQVARALGITERTVKAHL 181 Query: 178 ESLYRRLEVKNRTQAAMMLNI 198 ++R + V +RT AA+ Sbjct: 182 GRVFREIGVLDRTSAALWARD 202 >UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 Tax=Bacillales RepID=C0Z7M8_BREBN Length = 602 Score = 197 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 82/211 (38%), Gaps = 18/211 (8%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++V+ D S ++ L+ + + A + + E LV++D + Sbjct: 383 IRLVIVDDHSFIRESLRSILEGQRDLRVVGLAEDGAQAVELCEELEPDLVLMDLEMPNMD 442 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ ++P +++L+ +T + +E++ + + A + G Sbjct: 443 GITATKRIKEKWPGIRILVLSTFQDTEKAKEIMRSGADGYLLKSIESRELAETIRLVHRG 502 Query: 121 MMFLPGDW------------------RTTPEKDIKDLKSLSARQREILTMLAAGESNKEI 162 + D + ++ L+ R++EIL MLA G K I Sbjct: 503 GTMIAQDLFHKMLDGQPVNGQEDLLVAPKQSEKDENAYGLTKREQEILQMLAQGMRYKTI 562 Query: 163 GRALNISTGTVKAHLESLYRRLEVKNRTQAA 193 L +S GTV+ + +LY +L V+NR A Sbjct: 563 ASKLYLSDGTVRNYASALYDKLGVRNRDDAV 593 >UniRef50_D1C6S1 Two component transcriptional regulator, LuxR family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6S1_SPHTD Length = 223 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 87/206 (42%), Gaps = 10/206 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + +++ D ++F G+ L + + A+ +E ++ +V++D D G Sbjct: 4 ISLLLVDDHALFREGLASLLSYQPDFTVVGEAASGEEAVERARELVPDVVLMDIDLPGID 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ Q PEV+V++ + L + I + ++ + A G Sbjct: 64 GIEATRRIKRQLPEVRVVMLTVYDDHERLFQSIKAGAQGYLIKNIRSAELLDQLRGLARG 123 Query: 121 MMFLPGDWRTTPEKDIKDLKS----------LSARQREILTMLAAGESNKEIGRALNIST 170 + ++ L+ LS R+ E+L ++A SNKEI L+IS Sbjct: 124 EAAISRRMAARILEEFARLERQAEILEPDGGLSPREVEVLELVALRLSNKEIAARLSISE 183 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 TVK HL+++ +L++ +R QAA Sbjct: 184 HTVKNHLKNILAKLQLSSRRQAAAYA 209 >UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=Gammaproteobacteria RepID=A5F1Q5_VIBC3 Length = 216 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 84/198 (42%), Gaps = 5/198 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++VM D + + G L+Q + AS E + ++ + +V++D Sbjct: 9 IRVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSMPIMN 68 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + P KVL+ N+ ++ +V+ + + ++ + A+ + G Sbjct: 69 GIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKTVHQG 128 Query: 121 MMFLPGDWRTTPEKD-----IKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKA 175 + +T LS R+ IL M+A G S+K+I LNIS TV+ Sbjct: 129 ATYFCESTTSTLFSQEILPVANKPNPLSRREEAILRMVAQGCSSKKIATLLNISYRTVET 188 Query: 176 HLESLYRRLEVKNRTQAA 193 H +++ +L++ + + A Sbjct: 189 HRQNIKHKLDIHSTAELA 206 >UniRef50_C7MRK0 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MRK0_SACVD Length = 226 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 91/206 (44%), Gaps = 10/206 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYP------EALVMLDG 54 +++++ D +I G++ L+ + A+ E L +V++D Sbjct: 11 VRVMVVDDHAIVRRGLRAYLETVPDLRLVSEAADGQEAVDLLNERHVVGDPMPHVVLMDL 70 Query: 55 DQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAV 114 + + +P+VKV++ + + + V +D+ E A AV Sbjct: 71 QMPRLDGIEATRSILASYPDVKVVVLTSFSEAERVHAALSAGAAGYVLKDAEPEEVATAV 130 Query: 115 NSAAMGMMFLPGDWRTTPEKDIKD----LKSLSARQREILTMLAAGESNKEIGRALNIST 170 +A G + L + + + SL+AR+R+IL ++ G SN+EI L IS Sbjct: 131 RAAVKGEVHLDAAVARLLARRMASPQVGVTSLTARERDILVLVGQGLSNREIADRLVISE 190 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 T + H+ ++ +L++ +RTQAA++ Sbjct: 191 RTARTHVSNVLSKLQLSSRTQAALLA 216 >UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator receiver n=32 Tax=Betaproteobacteria RepID=Q46VQ7_RALEJ Length = 231 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 83/199 (41%), Gaps = 7/199 (3%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLES----YPEALVMLDGDQD 57 ++++ D ++ GM++ L + + A + LE LV+ D Sbjct: 20 RVLLIDDHALVRDGMRMHLTLQPDLYVVGEADGGEAALAWLERAGARERPDLVITDIGMR 79 Query: 58 GEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSA 117 G L Q+PE+ VL+ + N + ++ + V +D+ + A+ + Sbjct: 80 GMGGIALTAALHEQYPEIAVLVVSMHDNLEYARQAVRAGARGYVLKDAPADELMAAIEAV 139 Query: 118 AMGMMFLPGDWRTTPEKDIK---DLKSLSARQREILTMLAAGESNKEIGRALNISTGTVK 174 G +F + + L +L+ R+R+IL + G +NKEI L +S TV+ Sbjct: 140 LAGRVFYSARIARGMAEQMPATGPLDALTRRERDILGCIGRGMANKEIATQLGVSVRTVE 199 Query: 175 AHLESLYRRLEVKNRTQAA 193 H +L R+L ++ R Sbjct: 200 THRLNLKRKLGIEGRAGLV 218 >UniRef50_A8L3K7 Two component transcriptional regulator, LuxR family n=16 Tax=Actinomycetales RepID=A8L3K7_FRASN Length = 244 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 46/203 (22%), Positives = 92/203 (45%), Gaps = 7/203 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++ + D I +G++ +L + + A A E +++ + + +LDG Sbjct: 36 IRVFVLDDHEIVRNGLRQTLARHDDIEVVGEAGLAAEALRRIPALHPHVAVLDGRLPDGS 95 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + ++ P+V LI + + L I V ++ A+ + A G Sbjct: 96 GIDVCREVRSALPDVACLILTSYDDDEALFSAIMAGAAGYVLKEIRGNDLVGAIRTVASG 155 Query: 121 MMFLPGDWRTTPEKDIKD-------LKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 L + ++D + +L+ R+REIL ++A G +N++IG L +S TV Sbjct: 156 QSLLAPSVTRRVLERLRDGPSEDPAMATLNQREREILQLIADGLTNRQIGTRLGLSEKTV 215 Query: 174 KAHLESLYRRLEVKNRTQAAMML 196 K ++ S+ +L + +RTQAA+ L Sbjct: 216 KNYVSSILEKLGLASRTQAAVYL 238 >UniRef50_UPI00018507A5 two component LuxR family transcriptional regulator n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI00018507A5 Length = 212 Score = 197 bits (501), Expect = 2e-49, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 78/203 (38%), Gaps = 12/203 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D +F G+ L I A +E Q + LV++D Sbjct: 4 IRVLIADDHPLFRQGVSSVLANTPDNEVIAEAGSGEEAVQMACNLLPDLVLMDIQMPDLN 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +K + + ++ ++I + + + V +D+ E AV + A G Sbjct: 64 GIEATRKILSKCRDIYIIIITMFEDDTSVFSAMQAGARGYVLKDAEKEDILRAVRAIAKG 123 Query: 121 MMFLPGDWRTTPEK------------DIKDLKSLSARQREILTMLAAGESNKEIGRALNI 168 + + L++R+ E+L +L+ G SN E+ L + Sbjct: 124 EVLFSSGVASRMIDYFAQGEVTQTVVASTLFPELTSRESEVLFLLSKGASNSEVAETLGL 183 Query: 169 STGTVKAHLESLYRRLEVKNRTQ 191 S TV ++ ++ +L+V +R + Sbjct: 184 SNKTVYNYVANILNKLQVSDRQE 206 >UniRef50_Q21KE6 Transcriptional regulator, XRE family n=2 Tax=Proteobacteria RepID=Q21KE6_SACD2 Length = 227 Score = 197 bits (501), Expect = 2e-49, Method: Composition-based stats. Identities = 45/216 (20%), Positives = 88/216 (40%), Gaps = 23/216 (10%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPE-ALVMLDGDQDGE 59 M++++ + +F G+ + L++ P I + + + + + +LV+LD + Sbjct: 1 MKVLLVEDHLLFRDGVSLILERLDPNTEITPCGTGADAFALAQQHADFSLVLLDYNLPDT 60 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 L + P +++ + + +Q+V+ + + S + A+ Sbjct: 61 TGLNCLAQIQAHLPTTPIVMLSAENKAELIQQVLAAGARGFITKTSPSDVMISAIKLVLS 120 Query: 120 GMMFLPGDW------------------RTTPEKDIKDLK----SLSARQREILTMLAAGE 157 G +++P + +P L+ RQ +L + G Sbjct: 121 GGVYIPQEMISALNMPFTAHSSDGITHAASPAPQTAPPATGDHQLTERQLHVLHEMLKGL 180 Query: 158 SNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAA 193 SNKEI R LN+S TVK H+ ++ R VKNRTQA Sbjct: 181 SNKEIARELNMSPSTVKVHVAAILREFNVKNRTQAV 216 >UniRef50_A4YN74 Two-component transcriptional regulator, LuxR family (Modular protein) n=2 Tax=Bradyrhizobium RepID=A4YN74_BRASO Length = 293 Score = 197 bits (501), Expect = 2e-49, Method: Composition-based stats. Identities = 49/202 (24%), Positives = 90/202 (44%), Gaps = 9/202 (4%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYP-EALVMLDGDQDGEF 60 ++++ + +F ++ ++ +P + A+ D L P L++LD G Sbjct: 50 RLLIIEDHPLFREALENAISAALPDAEMLQATSIDTAIGLLSPPPGVDLILLDLSTPGTT 109 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + P +L+ + + R + V+ V V + ST E A A+NS G Sbjct: 110 GLSGVIRLRKSAPRTPILVVSAHQDPRLVAYVLSLGVAGYVSKSSTKEQLAHAINSVLRG 169 Query: 121 MMFLPGDWRTTPEKD--------IKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 + +PG R+ + +K L L+ +Q +L + G NK+I L I T Sbjct: 170 DVHVPGSARSAEARRTRLPAQDLLKRLHDLTPQQLRVLDQIRCGLQNKQIAYELGICETT 229 Query: 173 VKAHLESLYRRLEVKNRTQAAM 194 VK H+ + R+L+V +RTQA + Sbjct: 230 VKVHVSDILRKLQVTSRTQAII 251 >UniRef50_A6TKJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridiaceae RepID=A6TKJ8_ALKMQ Length = 205 Score = 197 bits (501), Expect = 2e-49, Method: Composition-based stats. Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 3/202 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 M+I++ D + G+ L I+ A +E + + + ++D + + Sbjct: 1 MRILIVDDHPLVRKGIASILFLEKDVHEIKEAENIEEAIDMMAKFSPEITLIDLNLGRQD 60 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ K + K ++ + + V + +++ E A+ G Sbjct: 61 GLEIVNKARAKGMATKFIVLTSSSKREDFLRAREAGVDGYILKEAFAEDILYALRIVLRG 120 Query: 121 MMFLPGD---WRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHL 177 F+ + ++T+ ++ L L+ R+R++LT L G SN EIG+ L IS TVK H+ Sbjct: 121 KKFIDPEVIQYQTSDIRENSHLDELTPRERDVLTELGKGLSNFEIGKQLFISEHTVKKHV 180 Query: 178 ESLYRRLEVKNRTQAAMMLNIS 199 ++ +LE+ +RTQAA+ +N S Sbjct: 181 SNILSKLELNHRTQAALFVNNS 202 >UniRef50_B9XL75 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XL75_9BACT Length = 234 Score = 197 bits (501), Expect = 2e-49, Method: Composition-based stats. Identities = 45/198 (22%), Positives = 85/198 (42%), Gaps = 10/198 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G+ L + A E K+ +V++D D Sbjct: 19 IKVLLADDHPVVRKGLGSCLNNLEHIEIVGEAVDGQETVSKVRELSPEIVLMDLDMPTMS 78 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + +FP VKVLI + NK ++ ++I V +D+ + A+ S G Sbjct: 79 GLEATKIIRREFPLVKVLILSIHTNKDYVLQIIKSGAQGYVLKDAPLTELVRAIESVHGG 138 Query: 121 MMFLPGDW----------RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIST 170 F D T ++ + K L+ R+ E+L+M+A G+SNKE+ + + Sbjct: 139 GAFFSPDISQIMLDQYLAEATNGEESGNSKKLTNRETEVLSMIAEGQSNKEMASRMGVGV 198 Query: 171 GTVKAHLESLYRRLEVKN 188 TV+ H E + +L++ N Sbjct: 199 RTVETHRERVMNKLDIHN 216 >UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomycetales RepID=A4XCA4_SALTO Length = 235 Score = 197 bits (501), Expect = 2e-49, Method: Composition-based stats. Identities = 42/205 (20%), Positives = 84/205 (40%), Gaps = 11/205 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D Q + +++ + + V A +E + +V++D G Sbjct: 3 IEVLVVDDQPLVRSALRMVVAEVDDMVIAGEAETGEEAVRLTRELKPDVVLMDLRMPGMG 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + V PE +VL+ T + + + ++ +++ AV + A G Sbjct: 63 GIEATGQIVRLSPETRVLVLTTFDEDDHVFGALQAGAAGFLIKNMSLDDILDAVRTVAHG 122 Query: 121 MMFLPG-----------DWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIS 169 L D RT P + L ++ R+RE+LT++ G SN EI L +S Sbjct: 123 NGLLAPSVTRRLIKHVVDTRTAPTVPRRPLSGITEREREVLTLVGRGLSNSEIADELRLS 182 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAM 194 TVK ++ L +L ++R + Sbjct: 183 HATVKTYITRLLSKLGARDRVHLVI 207 >UniRef50_C0GEE4 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GEE4_9FIRM Length = 205 Score = 197 bits (501), Expect = 3e-49, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 87/197 (44%), Gaps = 2/197 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 M++++ D + G+++ A+ E + LE + + ++D GE Sbjct: 1 MRVIIIDDHPLVRKGLELVASLEEDFEICGFAANGLEAMEVLEKHSPDVALVDLRLPGEH 60 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +++K K ++ + K +++ + V + +++ E +V G Sbjct: 61 GLDIIEKARSINSTCKYIVLTSYATKEEIKQAMALEVDGYILKETLPEELITSVRMIHKG 120 Query: 121 MMFLPGDW--RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLE 178 + EK+ L L+ R+ E+L L+ G +NK+I L IS TVK H+ Sbjct: 121 RKYFDPVIVQHALEEKNEDKLSELTTREMEVLKFLSRGLNNKKIAEDLFISEHTVKKHVG 180 Query: 179 SLYRRLEVKNRTQAAMM 195 + +LE+++RTQAA+ Sbjct: 181 QILTKLELQDRTQAALY 197 >UniRef50_A3Y699 Putative two component system response regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3Y699_9GAMM Length = 226 Score = 197 bits (501), Expect = 3e-49, Method: Composition-based stats. Identities = 44/208 (21%), Positives = 84/208 (40%), Gaps = 12/208 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++IV+ D Q++ G+ + L + + + E + + Y L+++D Sbjct: 3 IRIVIVDDQALVRSGLSMILDHQSDIEVVAECANGLEAIEAAKKYIPDLILMDIRMPEMD 62 Query: 61 CYWLLQKTVVQFP-EVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 + + +++I +T ++ + + +D+ + AV+ A Sbjct: 63 GLSATSAILGDLNIQTRIVILSTFDLDEYIYRALREGASGFILKDTPPDELVAAVHVVAQ 122 Query: 120 GMMFLPGDWRTTPEKDIKDLKS-----------LSARQREILTMLAAGESNKEIGRALNI 168 G L +LK L+ R++EIL LA G +N EI L I Sbjct: 123 GGALLTPSITKKLIGAFAELKPSHTNVTGHIDRLTTREKEILKNLALGFNNSEIASRLFI 182 Query: 169 STGTVKAHLESLYRRLEVKNRTQAAMML 196 TVK H+ SL +LE+++R QA + Sbjct: 183 GESTVKTHVSSLLSKLELRDRAQAVIFA 210 >UniRef50_Q0A822 Two component transcriptional regulator, LuxR family n=2 Tax=Ectothiorhodospiraceae RepID=Q0A822_ALHEH Length = 221 Score = 196 bits (500), Expect = 3e-49, Method: Composition-based stats. Identities = 49/210 (23%), Positives = 89/210 (42%), Gaps = 18/210 (8%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 M++++ D ++ + L Q G ++ A E L P +V+LD G Sbjct: 1 MRLLLVDDHTLLRVALGDMLSQH--GYQVEHAGTEIEALSALAKSPPDVVLLDLRMPGSG 58 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +L++ + E+ V++ + +R L + + + +D+ + G Sbjct: 59 GLEVLKRIRSRDSELPVVMLTSSDEERDLLQALQAGANGYLVKDAEPAELIQGLEKVLAG 118 Query: 121 MMFLPGDWRTT----------------PEKDIKDLKSLSARQREILTMLAAGESNKEIGR 164 + T + +L+ R+REIL +A ESNK I R Sbjct: 119 QTAVASRLTDTLVQMMAGGRSQREGAEASRPPDPFAALTPREREILMHVARAESNKVIAR 178 Query: 165 ALNISTGTVKAHLESLYRRLEVKNRTQAAM 194 L +S GTVK H++S+ R+L VK+R +AA+ Sbjct: 179 ELGVSDGTVKLHIKSILRKLGVKSRVEAAV 208 >UniRef50_Q15NL1 Two component transcriptional regulator, LuxR family n=3 Tax=Alteromonadales RepID=Q15NL1_PSEA6 Length = 212 Score = 196 bits (500), Expect = 3e-49, Method: Composition-based stats. Identities = 47/205 (22%), Positives = 94/205 (45%), Gaps = 8/205 (3%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPE-ALVMLDGDQDGEF 60 + ++ D +F + +L + I + D L P+ L++LD G Sbjct: 3 KFLIADDHPLFREALVGALSPLFEDIEILQSDSLDSTLMTLHENPDIDLILLDLHMPGCE 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ L + +PE+ V + + + + V+ F VP+ S A A+ + G Sbjct: 63 NFYGLIRVTQDYPEIPVAVVSASDSIEVVSYVMSFGAKGFVPKSSPTLMIADALKTIMSG 122 Query: 121 MMFLPGDWRTTPEK-------DIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 ++L + + + + + L+ +Q ++L ++ G NK+I LN++ TV Sbjct: 123 EIWLTEELKAQIAQIDGEELNLAQRIAELTPKQFQVLKLIHDGLLNKQIAHELNVTEATV 182 Query: 174 KAHLESLYRRLEVKNRTQAAMMLNI 198 KAH+ +++R+LEV RTQA ++L Sbjct: 183 KAHISAVFRKLEVNTRTQAVLLLKK 207 >UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 Tax=Dehalococcoides RepID=D2BGT0_DEHSV Length = 232 Score = 196 bits (500), Expect = 3e-49, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 79/203 (38%), Gaps = 10/203 (4%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 ++++ D ++ GM L Q + A E + + +V++D Sbjct: 5 KVLIADDHAVLREGMSRLLSQEKDIEVVGEAGDGQEAVDMVAQFKPDVVLMDIVMPRLTG 64 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 + P +LI + R++ ++ + + + + A+ + G Sbjct: 65 VEATKLIKKNNPSTCILILTAYSDIRYILGLLEAGASGYLLKSAKSDEIVGAIRAIKAGE 124 Query: 122 MFLPGDWRTTPEKDIKDLK----------SLSARQREILTMLAAGESNKEIGRALNISTG 171 L + + ++ LS R+ EIL + + G SN+EI L +S Sbjct: 125 SVLDSIATRKLLERVVNVSKESDEDKVRGQLSPREVEILQLASKGLSNREIADKLTLSMR 184 Query: 172 TVKAHLESLYRRLEVKNRTQAAM 194 TVKAHL +++ ++ RT+A + Sbjct: 185 TVKAHLSNIFNKMRCSCRTEAIV 207 >UniRef50_Q15UD9 Two component transcriptional regulator, LuxR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15UD9_PSEA6 Length = 213 Score = 196 bits (500), Expect = 3e-49, Method: Composition-based stats. Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 10/206 (4%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEA-LVMLDGDQDGEF 60 + ++ D +F MK ++Q + G I ++ + L+ + + L+ LD + G Sbjct: 4 KAIVADDHPLFRSAMKQAIQGVL-GNDILESASYQQTIDLLKLHSDVELIFLDLNMPGND 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L FP+V V I + D + +++ + F +P+ + + A AV G Sbjct: 63 GLTGLTMIRSHFPDVLVAIVSGDESPSMIRKAMDFGACGYIPKSTPLPVIADAVRELLEG 122 Query: 121 MMFLPGDWRTTPEKDIKD--------LKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 +LP + +K L L+ Q ++L ++A G NK+I L +S T Sbjct: 123 EQWLPNELVEQVQKIEDSQEQAFAGKLAQLTPHQLKVLQLMADGLLNKQIAYELGVSEST 182 Query: 173 VKAHLESLYRRLEVKNRTQAAMMLNI 198 +K H+ ++ +L NRTQA ++ Sbjct: 183 IKQHVSAVLHKLGFNNRTQAGVLFKQ 208 >UniRef50_B4D5C2 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5C2_9BACT Length = 213 Score = 196 bits (500), Expect = 3e-49, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 89/194 (45%), Gaps = 1/194 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G++ L+ I A+ E ++ ++ + ++D Sbjct: 7 IRVMLVDDHFAILMGLRACLKPEGDIAVIAEAADGGEAIEQYRAHLPDITLMDLSLPRLD 66 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ +FPE +++ T + + + + V ++ + A+ + G Sbjct: 67 GVAAIRTICREFPEARIIALTTRQGDDDIHQALSAGARSYVMKNMPRQEMLRAIRAVHDG 126 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 +LP + +T + K L+ R+ E++ +LA G SNKEIG AL I+ T K H+ L Sbjct: 127 QEYLPQEVQTALLQHEKR-APLTPRELEVIRLLARGCSNKEIGMALGIAEITAKIHVSHL 185 Query: 181 YRRLEVKNRTQAAM 194 ++ V +R+QA M Sbjct: 186 LSKMGVLDRSQAVM 199 >UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZNU7_THASP Length = 220 Score = 196 bits (500), Expect = 3e-49, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 94/199 (47%), Gaps = 7/199 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D +F H ++ L + + A+ +E+ ++ P LV +D G Sbjct: 3 LRILLADDHQMFRHALRALLARDPELEVVAEAASGEEVLAIADAQPVDLVCMDIAMPGMD 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ + + P ++V+ + +++++ +++ + + + A+ + G Sbjct: 63 GIEATRRLLARHPALRVIGLSAFADRQFVTDLLAAGARGYITKGEAGDELLRAIRTVCEG 122 Query: 121 MMFLPGDWRTTPEKDIKDL-------KSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 +L + T ++D L+AR+R++L ++A G ++ +IG L+I+ TV Sbjct: 123 RSYLCPEVAATVADALRDSPGVYAAAPRLTARERQVLQLIAEGLTSVQIGDRLHIAASTV 182 Query: 174 KAHLESLYRRLEVKNRTQA 192 + H +L R+L++ N + Sbjct: 183 EVHRRNLMRKLDLHNVAEL 201 >UniRef50_A9B4P1 Two component transcriptional regulator, LuxR family n=11 Tax=Bacteria RepID=A9B4P1_HERA2 Length = 257 Score = 196 bits (500), Expect = 3e-49, Method: Composition-based stats. Identities = 48/217 (22%), Positives = 89/217 (41%), Gaps = 21/217 (9%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++++M D +F G++ +L I S A+E + + +V+ D + Sbjct: 5 VKVLMVDDHPLFRQGVRWALSSERDIKIIGEGSSAEEGLVLISEHEPDVVLTDLNLPNMD 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + Q+P + V++ + + + A ++ + +T A + A G Sbjct: 65 GLEFTRTIRRQYPNIGVVMLSVYESDEHAFNALRAGAAAYYSKEISPKTLATVLRRVARG 124 Query: 121 MMFLPG---------------------DWRTTPEKDIKDLKSLSARQREILTMLAAGESN 159 + P+ DI LS R+ E+L +A+G +N Sbjct: 125 EYVINDVMFEDPRVADRILTQFRGLQTGIVAEPDLDISLFSPLSDREIEVLEHIASGATN 184 Query: 160 KEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMML 196 K+I AL IST TVK H+ S+ R+L + +RTQA + Sbjct: 185 KDIADALKISTQTVKNHISSILRKLSLNDRTQAVLYA 221 >UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VH7_CYTH3 Length = 220 Score = 196 bits (499), Expect = 4e-49, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 87/211 (41%), Gaps = 15/211 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + I++ D +I G+K +L+ + + A+ + + ++ +V++D Sbjct: 4 INILLVDDHTIVRDGIKATLKDQKNFHIVGEAANGLDGIEAVKQLKPDVVIMDITMPEMS 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++P+ KVLI + N+ ++ + + + +D + F A+ + G Sbjct: 64 GIEAADVISKKYPDSKVLILSMHDNETYILKSVEAGAYGYLLKDVDKDEFIKAITAVYNG 123 Query: 121 MMFLPGDWRTTPEKD---------------IKDLKSLSARQREILTMLAAGESNKEIGRA 165 + + D L+ R++ IL M+ G++N+EI Sbjct: 124 DKYFNTAISSVLVSGYLSKVKQTDSIQSGYSNDEYELTKREKGILKMITDGKNNREIADG 183 Query: 166 LNISTGTVKAHLESLYRRLEVKNRTQAAMML 196 L IS T++ H ++ ++L+VKN + + Sbjct: 184 LGISIRTIETHRANIMKKLKVKNAVELVRIA 214 >UniRef50_D1CF52 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=D1CF52_THET1 Length = 1648 Score = 196 bits (499), Expect = 4e-49, Method: Composition-based stats. Identities = 44/203 (21%), Positives = 85/203 (41%), Gaps = 8/203 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++V+ D ++F G+K L+ + + AS E + + + LV++D Sbjct: 1439 LRVVIADDHALFRDGIKSLLESEGFQM-VGEASNGQEAVELVHNLSPDLVLMDLSMPVMG 1497 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ P VKV++ + L E I +P++ E F + + G Sbjct: 1498 GLDAIRLISADKPSVKVIVLTASEEDKDLFEAIKAGAQGFIPKNLESEEFFQLLRNVIRG 1557 Query: 121 MMFLPGDWRTTPEKDIKD------LKSLSARQREILTMLAAGE-SNKEIGRALNISTGTV 173 + + L+ L+ R++EIL +L G S K++ R L +S TV Sbjct: 1558 EPAITPRLAGKLIDEFSRPVRSSSLQMLTDREQEILQLLVNGVTSTKDLSRQLGVSEHTV 1617 Query: 174 KAHLESLYRRLEVKNRTQAAMML 196 K HL ++ +L +++R Q Sbjct: 1618 KYHLRNILSKLHLQSRAQVVAWA 1640 >UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 Tax=Bacteria RepID=Q3Z8L1_DEHE1 Length = 224 Score = 196 bits (499), Expect = 4e-49, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 87/205 (42%), Gaps = 10/205 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D I G + +Q+ + + AS E + +V++D Sbjct: 7 IKVLLADDHVIVREGTRELIQRESGMMVVGEASDGVEAVEMSMKVHPDVVVMDIAMPRLN 66 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ P +LI +++++ ++ + + ++ A+ + G Sbjct: 67 GIEATKQIKQLLPTTAILILTAYESEQYILAILEAGAASFLLKNVKGTQLLEAIRAVYAG 126 Query: 121 MMFLPGDW----------RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIST 170 L + T +++ + L+ R+ E+L M A G SNK+I L +S Sbjct: 127 ESVLQPSTTRRVIDQLINKATKTEEVSAVNPLTDREIEVLKMAARGVSNKDIADQLYLSN 186 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMM 195 T++ HL +++++L V +RT+A + Sbjct: 187 RTIQTHLSNIFKKLSVGSRTEAILY 211 >UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Actinomycetales RepID=D2AUN6_STRRD Length = 226 Score = 196 bits (499), Expect = 4e-49, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 86/211 (40%), Gaps = 12/211 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D +++ G++ L + A E + S+ +V+LD Sbjct: 2 IRVLLADDEAMIRAGVRAILAADPEIEVVAEAGDGREAIDLVLSHRPDVVLLDIRMPRMD 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + P V++ T ++ + + + +++ A G Sbjct: 62 GLAAVAELRRVAPGTAVVMLTTFGEDDYIARALGEGAGGFLLKSGDPRELLAGIHAVAEG 121 Query: 121 MMFLPGDWR------------TTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNI 168 +L T + + +L+ R+R++L ++ G SN +I R L + Sbjct: 122 AAYLSPRVAHRVITQLTGGRMTRVVAAREQVAALTPRERDVLALVGEGLSNGQIARRLYL 181 Query: 169 STGTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 GTVKAH+ ++ RL +NR QAA++ + + Sbjct: 182 VEGTVKAHVSAILTRLGARNRVQAAILAHEA 212 >UniRef50_A6TUG7 Two component transcriptional regulator, LuxR family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TUG7_ALKMQ Length = 201 Score = 195 bits (498), Expect = 5e-49, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 89/196 (45%), Gaps = 1/196 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 M+I++ D + +++ L + + A+ E +V++D Sbjct: 1 MKILIVDDDQLVCQSLQVLLSREQDMDVMATANNGAEAITCCRDILPDVVLMDIQMPVMD 60 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ ++P++++++ T +++ ++ I + + + V + A + G Sbjct: 61 GIQATREIKKEWPQIRIMMLTTFQDEQNIRLAISAGAEGYLIKSTEVSSMAQQLRVLFSG 120 Query: 121 MMFLPGD-WRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLES 179 L D + + K + L+ R+R+I+ ++ G SN+EI L IS GTV+ L Sbjct: 121 TSVLDADVLKRLMQPQRKGFEELTPRERDIVELVVQGLSNREIAEQLYISEGTVRNTLSI 180 Query: 180 LYRRLEVKNRTQAAMM 195 + +L+V++RTQ A+ Sbjct: 181 ILEKLQVRDRTQLAIY 196 >UniRef50_D2SFS4 Two component transcriptional regulator, LuxR family n=2 Tax=Frankineae RepID=D2SFS4_9ACTO Length = 220 Score = 195 bits (498), Expect = 5e-49, Method: Composition-based stats. Identities = 43/201 (21%), Positives = 89/201 (44%), Gaps = 3/201 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + +++ D ++ G+ + + A+ E +++ +V++D Sbjct: 2 IDVLVVDDHALMRTGLSGLIAAAGDMRVVGTAADGAEAVEEVARLAPHVVLMDLSMPVLD 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ V + P V+VL+ + +++ + E + V +D+ A+ S A G Sbjct: 62 GVAATRRIVEEHPSVEVLVLTSFSDRQRVIEALDAGAGGYVLKDTEPADLLAAIRSTARG 121 Query: 121 MMFLPGDWRTT---PEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHL 177 L T + L+ R++E+L ++ G +NK+I R L I TVKAHL Sbjct: 122 HSPLDPRVARTVLHARRSPVRAAELTEREQEVLALVGHGLANKQIARRLGIRESTVKAHL 181 Query: 178 ESLYRRLEVKNRTQAAMMLNI 198 S+++R+ V++RT A + Sbjct: 182 TSVFQRIGVRDRTSATLWART 202 >UniRef50_B4DBM9 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBM9_9BACT Length = 209 Score = 195 bits (498), Expect = 5e-49, Method: Composition-based stats. Identities = 46/195 (23%), Positives = 84/195 (43%), Gaps = 2/195 (1%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 +I++ D I G+ SL + A+ + + + LV++D + Sbjct: 8 RILIVDDHFIARKGLIGSLSAEPDIEIVAEANNGFQAVEMFVLHRPDLVLMDVRLPLQDG 67 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 + P+ ++ + + + I V+ +P+ E A++ A G Sbjct: 68 VQAARTIRNDHPQARIAMLTVSDAEEDILGAIDAGVVGYLPKSVEREQLLTAIHRLAEGG 127 Query: 122 MFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLY 181 + + + SL+ R+ E+LT + G SNKEIG L I+ TV+ HL L+ Sbjct: 128 EYFAPEIEAKLRSTNR--VSLTKRETEVLTQIVKGRSNKEIGYDLGIAEPTVRLHLTHLF 185 Query: 182 RRLEVKNRTQAAMML 196 ++L V +RTQAAM+ Sbjct: 186 KKLHVMDRTQAAMVA 200 >UniRef50_B5JPJ0 Sigma-70, region 4 family n=3 Tax=Verrucomicrobiales RepID=B5JPJ0_9BACT Length = 213 Score = 195 bits (498), Expect = 5e-49, Method: Composition-based stats. Identities = 49/207 (23%), Positives = 88/207 (42%), Gaps = 7/207 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I + + Q ++ + I S +E KL +V++D Sbjct: 6 IKIAIVEDQDTTRESLEAIINLEHSMECILTCSSGEEALSKLPKARPDVVLMDIMMPYMT 65 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 K PE+++++ + + + + + ST E A+ A G Sbjct: 66 GIECASKLKDLMPEIEIVMITVYQDPDLIYSALRAGACGYLLKRSTPEQVTTAIRDAKRG 125 Query: 121 MMFLPGDWRTTP-------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 M + + + D+ SLS R+RE+L +A G +NKEI L+++ TV Sbjct: 126 GMPMSVEVARRVISYFRQEAQVSSDVDSLSNREREVLEFVAQGFTNKEIAAKLSVTPETV 185 Query: 174 KAHLESLYRRLEVKNRTQAAMMLNISS 200 HL++ Y++L V+ RT+AAM L SS Sbjct: 186 HWHLKNCYKKLHVRTRTEAAMKLRQSS 212 >UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=Q2RMH6_MOOTA Length = 221 Score = 195 bits (498), Expect = 6e-49, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 83/205 (40%), Gaps = 12/205 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQD-GE 59 +++++ D ++ G++ L++ + A + E +V++D G Sbjct: 3 IRVMLVDDHALVREGLRALLEREGDIEVVGETGSAAGVLALAEESRPEVVVMDLQLGAGR 62 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 ++ V + PE+KV+I + ++ + + V + + +E A+ A Sbjct: 63 NGVEATRELVEKKPEIKVVILSMYDDEELVFRALESGARGYVLKRAGIEELTTAIRLVAR 122 Query: 120 GMMFLPGDWRTTP-----------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNI 168 G +L + L+ R+ E+L + A G +N EI R L I Sbjct: 123 GEAYLDPQIARRVIEGLQERLPFTRASRPEGPELTERELEVLRLAAEGLTNAEIARRLVI 182 Query: 169 STGTVKAHLESLYRRLEVKNRTQAA 193 S TV+AH ++ ++L + +R Sbjct: 183 SVKTVQAHRANIMQKLGLHDRVDLV 207 >UniRef50_D1CI66 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1CI66_THET1 Length = 218 Score = 195 bits (498), Expect = 6e-49, Method: Composition-based stats. Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 12/206 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQG-ASQADELWQKLESYPEALVMLDGDQDGE 59 M++++ D ++F ++ L+ R GV + G A E + +V++D G Sbjct: 1 MRVLIADDHALFRDSLRTLLEAR--GVEVVGEAETGKEAVELARELRPDVVLMDLKMPGM 58 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 + + PEVKV++ + L E + L + +D + F + +A+ Sbjct: 59 DGLAATRMISAEMPEVKVVVLTASEDDEDLFEAVKSGALGYMFKDVRSDQFFELLEAASR 118 Query: 120 GMMFLPGDWRTTPEKDI--------KDLKSLSARQREILTMLAAGE-SNKEIGRALNIST 170 G +++ ++ + L+ R++EIL +L G SNKE+ L +S Sbjct: 119 GEPAFTPGLARKLLREMSKPAGRAEREPEVLTEREQEILELLVQGVTSNKELAERLILSE 178 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 TVK HL ++ +L ++NRTQ Sbjct: 179 NTVKYHLRNILDKLHLQNRTQVVAYA 204 >UniRef50_B8FDP3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDP3_DESAA Length = 219 Score = 195 bits (498), Expect = 6e-49, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 81/197 (41%), Gaps = 9/197 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ + ++ G+K + R + A + L++LD Sbjct: 6 IKILITEDHALVRKGLKSLISSRSEFQVVGEADNGLAAIEMTRKCKPDLILLDLSMPKMN 65 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +++ + PEVK+L+ ++ +L + + + + +A+ + G Sbjct: 66 GLATMRQLKKERPEVKILVITMHASQDYLIPALKEGADGYLLKGDDPQELFMAIRAIMDG 125 Query: 121 MMFLPGDWRTTP---------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTG 171 +L D + L SL+ R++E+ ++A G +N++I L IS Sbjct: 126 KAYLSSDLSGQLIHSVINPDTREAADPLASLTQREKEVFQLVAEGNTNQQIADLLFISPK 185 Query: 172 TVKAHLESLYRRLEVKN 188 TV H +L ++L++ + Sbjct: 186 TVDKHRTNLMKKLDLHS 202 >UniRef50_C5SGD8 Two component transcriptional regulator, LuxR family n=2 Tax=Caulobacteraceae RepID=C5SGD8_9CAUL Length = 218 Score = 195 bits (498), Expect = 6e-49, Method: Composition-based stats. Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 9/205 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDG-E 59 ++I++ D ++ G+K L + A+ E+ +V++D G Sbjct: 6 LRILIVDDHALAREGLKAVL-TSSGFSVVGEAADGPAAIALTEALCPDVVLMDVRLKGDM 64 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 ++ +VL+ +++E + V +D+ ++ A+ A Sbjct: 65 DGLEATRRIAALGLAARVLMLTLHDLPAYVREALAAGAAGYVLKDTAIDDLQAAIVRVAQ 124 Query: 120 GMMFLPGDWRTTP-------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 G LP D + E+D L SL+ R+REI+ ++A G +NKEIGR+L IS T Sbjct: 125 GQTALPLDLVSAAMRAPEPVERDPTALSSLTGREREIVHLIAEGMTNKEIGRSLGISPAT 184 Query: 173 VKAHLESLYRRLEVKNRTQAAMMLN 197 VKAH+E L +L V +RTQAA++ + Sbjct: 185 VKAHVERLIAKLGVTDRTQAAVLAS 209 >UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC6_SOLUE Length = 216 Score = 195 bits (497), Expect = 6e-49, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 87/206 (42%), Gaps = 10/206 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D ++ G+++ L+ I A+ + + +V++D G Sbjct: 4 IRILLADDHTVVRKGLRLLLESHPGFQVIGDAADGRDAVSLAGEHTPDVVVMDVAMPGLN 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ + P ++ + ++ ++ + + A + +DS AV + + G Sbjct: 64 GIEAARQISAKLPHTAIVFLSMHSDESYVLKALKAGARAYLLKDSAEHDLIAAVIAVSEG 123 Query: 121 MMFLPGDWRTTPEKD----------IKDLKSLSARQREILTMLAAGESNKEIGRALNIST 170 F +D + L+ R+RE+L +LA G++NKE+ LN+S Sbjct: 124 KAFFSPAISKMLVEDYMRQMQERQIEDSYELLTTREREVLQLLAEGKNNKEVAAILNLSL 183 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 TV+ H ++ ++L + + + + Sbjct: 184 YTVETHRGNILQKLNLHSGAELILYA 209 >UniRef50_Q0FFK6 DNA-binding response regulator, LuxR family protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FFK6_9RHOB Length = 205 Score = 195 bits (497), Expect = 7e-49, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 4/201 (1%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPE-ALVMLDGDQDGEF 60 I++ D + + L+ + + A + + L++LD + G Sbjct: 3 NILIADDHDLVRDTIAAYLET-VDSFKVFTAHDLASALEVMSGVDSIDLLILDYNMPGMN 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L++ +P KV + + N+ + + +P+ + +F A+ G Sbjct: 62 GLQGLERACTSYPATKVALMSGVANREIANNAMERHARGFIPKSLSATSFINAIKFILSG 121 Query: 121 MMFLPGDWRTTPE--KDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLE 178 +LP D ++ K+ D ++SAR+ + L L G SNKEI R L+I TVK H++ Sbjct: 122 ERYLPFDLVSSAPASKNHDDFTNVSAREMQTLEQLCIGLSNKEIARNLDIQEVTVKLHVK 181 Query: 179 SLYRRLEVKNRTQAAMMLNIS 199 +++ +L V NRTQAA+ Sbjct: 182 NIFSKLGVSNRTQAALFAKER 202 >UniRef50_B1L0K3 DNA-binding response regulator, LuxR family n=22 Tax=Bacteria RepID=B1L0K3_CLOBM Length = 217 Score = 195 bits (497), Expect = 7e-49, Method: Composition-based stats. Identities = 46/206 (22%), Positives = 90/206 (43%), Gaps = 11/206 (5%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 I++ D + + G+KI L + A E + +V++D Sbjct: 5 NIIVVDDEKLIREGLKIILSTYNDIEVVGLAGDGREALSLCKEKDVQVVLMDIRMPNCDG 64 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 + QFP +K+LI T +K ++ E + F + +DS+ E + + G Sbjct: 65 VLGTRIIKEQFPHIKILILTTFNDKEYIHEALKFGASGYLLKDSSNELIYEGIKACVKGN 124 Query: 122 MFLPGDW-----------RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIST 170 + + D + + DI +L+ R+ I+ +A G SNKEI + +S Sbjct: 125 VVVHPDVANNIILNTTYEKELNDDDINLKYNLTEREINIIRQIANGLSNKEIAEKIYLSE 184 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 GT+K ++ ++ +L++++RTQ A+ Sbjct: 185 GTIKNNISTILSKLDLRDRTQIAIFA 210 >UniRef50_B2A7N5 Two component transcriptional regulator, LuxR family n=5 Tax=Firmicutes RepID=B2A7N5_NATTJ Length = 232 Score = 195 bits (497), Expect = 7e-49, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 93/226 (41%), Gaps = 28/226 (12%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D Q+I +K + + +S +E + E ++++D Sbjct: 4 IKVMIADDQTILADSLKTIIDLEDDMEVVAVSSNGEETLEISEKLLPDIILMDIRMPKMD 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +K ++PE+K++I T + ++ + + + + +D + ++ A Sbjct: 64 GVECTKKLKEKYPEIKIIILTTFDHDEYIVDALSYGASGYLLKDIDGDKLISSIRDAYND 123 Query: 121 MMFLPGDWRT-----------TPEKDIKD-----------------LKSLSARQREILTM 152 + +P P D KD + L+ R+ EI + Sbjct: 124 KLLIPTSIAAKLIGKIDNRKQQPTDDHKDEPLKSQDRKESQKEINLYEELTQREIEIAQL 183 Query: 153 LAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNI 198 + AG SNK+I L I+ GTVK ++ ++Y +L VK RT A + L Sbjct: 184 MVAGLSNKKIAEKLFITQGTVKNYITNIYSKLGVKERTSAVLYLQK 229 >UniRef50_Q1ZGB3 Nitrate/nitrite response regulator protein NarP n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZGB3_9GAMM Length = 211 Score = 195 bits (497), Expect = 7e-49, Method: Composition-based stats. Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 6/201 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G+ L + A +E + Y L++LD + G Sbjct: 5 IRVMIIDDHPLMRKGIAQLLSLDSKFEIVVEAKSGEEGLEFANQYQLDLILLDFNMQGIS 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L++ Q K++I NK+ + +I+ +DS +N G Sbjct: 65 GLETLKRLRSQGHLTKIIILTVSDNKQDVIAMINHGANGYFLKDSDASLLLSNINKVLAG 124 Query: 121 MMFLPGDWRT------TPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVK 174 + L D + + L +L+ R+R+IL +A G+SNKEI L+IS GTVK Sbjct: 125 ELVLSDDLIKYLNDLDEEDNIREKLNNLTKRERQILQEIAKGQSNKEISINLHISEGTVK 184 Query: 175 AHLESLYRRLEVKNRTQAAMM 195 H++SL ++L+ K+R +AA++ Sbjct: 185 VHVKSLLKKLQAKSRVEAAIV 205 >UniRef50_UPI0001789C57 two component transcriptional regulator, LuxR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C57 Length = 225 Score = 195 bits (497), Expect = 7e-49, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 80/210 (38%), Gaps = 16/210 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++IV+ D Q G++ L + I A +E +V++D G Sbjct: 7 IRIVLADDQPFIRKGLRYILDIQKDMQVIGEAMTGEEAVDITLRNVPDIVLMDIRMPGGT 66 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + P KV++ T ++++ + I + +D+ + + + G Sbjct: 67 GIMATKSIAEALPNTKVVLLTTFDVEQYVFDGIRAGASGYLLKDTETDELLSGIRAMHRG 126 Query: 121 MMFLPGDWRTTPEKDI----------------KDLKSLSARQREILTMLAAGESNKEIGR 164 I + L +L+ R+ E+L +LA G+ N EI Sbjct: 127 ATLFNSSTAKRALDQILTSGMQEPDSDSPGKDRLLGALTERETEVLQLLAYGKRNHEISA 186 Query: 165 ALNISTGTVKAHLESLYRRLEVKNRTQAAM 194 L IS GT K H+ + ++L +RTQA + Sbjct: 187 ILCISEGTTKTHIHHIMQKLGALDRTQAVV 216 >UniRef50_Q2W650 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W650_MAGSA Length = 213 Score = 195 bits (497), Expect = 7e-49, Method: Composition-based stats. Identities = 49/200 (24%), Positives = 86/200 (43%), Gaps = 6/200 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 M+I++ D +++ + L++ P S A + LE LVMLD G Sbjct: 1 MRIIIADDHPLYLEAVLGQLEKAFPAGSFHTARNLADTLALLERESVDLVMLDYSMPGMN 60 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + V I + + ++ I +P+ F AV G Sbjct: 61 GVEGIPTAIAAARGTPVAIMSGVADDDAVRACIAAGARGFLPKTLESRVFIQAVGLVGAG 120 Query: 121 MMFLPGDWRTTPEKDIKDLKS------LSARQREILTMLAAGESNKEIGRALNISTGTVK 174 ++P ++ P K ++R+ E+L ++ AG SNKEI R L++ T+K Sbjct: 121 GTYVPAEFAALPSKPAAPATPTLDPSLFTSREMEVLALIVAGASNKEIARQLDLQEVTIK 180 Query: 175 AHLESLYRRLEVKNRTQAAM 194 HL ++++L VKNR+ AA+ Sbjct: 181 LHLTRIFQKLGVKNRSHAAV 200 >UniRef50_C6P401 Two component transcriptional regulator, LuxR family n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P401_9PROT Length = 228 Score = 195 bits (497), Expect = 8e-49, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 100/207 (48%), Gaps = 14/207 (6%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPE-ALVMLDGDQDGE 59 ++++M D ++F GM+ LQQ V I + + Q + P+ L +LD + G Sbjct: 3 IKVLMADDHALFRDGMRYVLQQLADEVEILDSGNFQDALQLVHDNPDVDLALLDLNMPGS 62 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 +Q ++ P++ +++ + ++ ++ V+ + + + S+ + A+ Sbjct: 63 EGVPSIQFFHLRHPDIPLVVVSGSDHRDDIESVMESGAMGFISKMSSSKIMLSALRMVLE 122 Query: 120 GMMFLPGDWRTTPEKDIKDLKS-------------LSARQREILTMLAAGESNKEIGRAL 166 G ++LP ++ +S L++RQ E+LT LA+G +NKEI + + Sbjct: 123 GGVYLPPQLLQQAVNNVDQGESLSSKRSQRAAKFGLTSRQLEVLTYLASGLANKEISKRM 182 Query: 167 NISTGTVKAHLESLYRRLEVKNRTQAA 193 N++ GTVK H ++Y+ L +R +A Sbjct: 183 NLAEGTVKIHTAAVYQALHANSRLEAV 209 >UniRef50_C1F7G9 Two-component response regulator n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7G9_ACIC5 Length = 213 Score = 195 bits (497), Expect = 8e-49, Method: Composition-based stats. Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 1/193 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G+ L + + AS E LE +V+LD G Sbjct: 9 IRVLIVDDHPVVRAGLTSMLSTKPQLHMLPAASGGAEALTVLEEEQVDVVLLDLKMPGIN 68 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +L + + + +I ++ + I + +D+T E A+ + G Sbjct: 69 GIEVLHRLNNRGALPRTIILSSYEMDEDIYRAIQAGARGYLIKDTTQEEILEAIAAVHAG 128 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 + LP + I + L+ R+ EIL MLA G +NKEIGR IS T + H+ S+ Sbjct: 129 SLHLPRHIAQRISERIGR-QELTRRETEILEMLAKGLTNKEIGRVFGISENTARNHVNSI 187 Query: 181 YRRLEVKNRTQAA 193 ++LEV +RT+AA Sbjct: 188 IQKLEVSDRTEAA 200 >UniRef50_C1A730 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A730_GEMAT Length = 209 Score = 195 bits (496), Expect = 8e-49, Method: Composition-based stats. Identities = 43/195 (22%), Positives = 79/195 (40%), Gaps = 1/195 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D +I G+ L I A + +V+ D Sbjct: 6 IRILLVDDHAILREGLAALLNGVDGMQVIGQAGDGATAIDLYRNLLPDVVICDLRMVPMD 65 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + +FP +V++ T + + + + +D V++ G Sbjct: 66 GTEVTSTIRAEFPAARVILLTTYDTDEEVFRGLRAGASSYLLKDVEPAQLIDTVHAVYAG 125 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 + + + +L+ARQ E+L LA G SN EI L IS GTVKAH++++ Sbjct: 126 RKAIDPSIAAKLAEHVAS-DALTARQLEVLRSLAEGRSNIEIANTLYISEGTVKAHIKAI 184 Query: 181 YRRLEVKNRTQAAMM 195 ++L ++RTQA + Sbjct: 185 LQKLGARDRTQAVTI 199 >UniRef50_Q024Y7 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q024Y7_SOLUE Length = 225 Score = 195 bits (496), Expect = 8e-49, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 93/210 (44%), Gaps = 13/210 (6%) Query: 3 IVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCY 62 IV+ D + G+++ L++ + + A + Q + +V++D G Sbjct: 5 IVLVDDHKLVRDGVRMILERGSEFLVVGEAENGADAVQLCKKSSPDIVLMDIGLPGMNGI 64 Query: 63 WLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMM 122 + + P VKV+I + ++ + I A V + ++ A+ + A G Sbjct: 65 EATTELLRHCPSVKVIILSMYDDENSVVSAIRSGARAFVLKKASSNELLDALRTVARGGS 124 Query: 123 FLPGDWRTTPEK----------DIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 +L + D L+SLS R+ ++L ++A G+++K+I L++ T Sbjct: 125 YLSSQVSDRLLQRIQRGDLETHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLLDLGLQT 184 Query: 173 VKAHLESLYRRLEVKNR---TQAAMMLNIS 199 V+++ +++ ++L V N TQ A+ I+ Sbjct: 185 VRSYRKTMMKKLGVNNVAGLTQLALAAGIT 214 >UniRef50_A4TWP9 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TWP9_9PROT Length = 222 Score = 195 bits (496), Expect = 9e-49, Method: Composition-based stats. Identities = 58/207 (28%), Positives = 90/207 (43%), Gaps = 11/207 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELW-QKLESYPEALVMLDGDQDGE 59 M+I++ D ++ G+ LQ+ S+ A DE + ++ L +LD + G Sbjct: 4 MEILLADDHAMVRDGLVPFLQRVTDNASVLEAGSFDEALIKARQASNLGLTILDLNMPGM 63 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 L +FP V V+I + + I +P+ ET + Sbjct: 64 DGLNGLATMRAEFPHVPVVILSGSTHPADAFHSIESGANGFIPKTMRGETIIGVLRLVLS 123 Query: 120 GMMFLPGDW--------RTTPEKDIK--DLKSLSARQREILTMLAAGESNKEIGRALNIS 169 G ++P R PE K L LSAR+ EIL M+ G NK I RA + Sbjct: 124 GEKYVPPFLFDYHETMNRKEPENTGKSGPLAVLSAREMEILGMIVDGAPNKVIARAFELQ 183 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMML 196 TVKAHL +++R++ V NRT+AA + Sbjct: 184 EVTVKAHLRNIFRKIAVSNRTEAARVA 210 >UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1Z2_9FIRM Length = 209 Score = 195 bits (496), Expect = 9e-49, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 84/202 (41%), Gaps = 9/202 (4%) Query: 4 VMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCYW 63 ++ D + G+K+ L+ A +E + L P LV++D G Sbjct: 1 MIVDDHLLIRAGIKLLLKNTSAYTVTAEAESGEEALRLLAQQPIDLVIMDISMPGMGGLA 60 Query: 64 LLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMF 123 +++ +P VK+L+ + ++ ++ + + + + +P+ S A+ + G + Sbjct: 61 CIREIRAHYPAVKILVLSMHEDEEYIYKAMQYGAMGYLPKTSADNELFDALQVLSQGRRY 120 Query: 124 LPGD---------WRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVK 174 L + +R E L+AR+RE+ L G + EI L++S TV Sbjct: 121 LSPNAQQSLMDIMFRPAEEAADDPRSVLTAREREVFDELIHGYTITEIAEQLHLSVKTVD 180 Query: 175 AHLESLYRRLEVKNRTQAAMML 196 H + +Y +L R++ + Sbjct: 181 THKKHIYEKLHCSRRSELVTLA 202 >UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR family n=2 Tax=Frankia sp. EAN1pec RepID=A8L9Z7_FRASN Length = 218 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 31/206 (15%), Positives = 80/206 (38%), Gaps = 7/206 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + + G+ + + A+ ++ + +V++D + G Sbjct: 8 IRVLLADDHRLVLDGLSALIDSVDGLTVVGEATSGEQAVDLAGTEHPDVVLMDIEMPGIG 67 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ P + V++ ++ + + + + + + + A G Sbjct: 68 GVEATRRITTAQPTIAVVMLTMYGEDEFVFAALRAGARGYLLKGAQQKDVVRTIGAVARG 127 Query: 121 MMFLPGDWR-------TTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 D T+P + L+ R+RE+L++LA G N I R L ++ TV Sbjct: 128 DAVFGPDVAHRVLRTFTSPPAENAPFPELTEREREVLSLLANGWPNSRIARHLQLTPKTV 187 Query: 174 KAHLESLYRRLEVKNRTQAAMMLNIS 199 ++ ++ +L +RT A + + Sbjct: 188 ANNVSNILAKLHAPDRTAAILRARRA 213 >UniRef50_D1BX47 Two component transcriptional regulator, LuxR family n=14 Tax=Actinomycetales RepID=D1BX47_XYLCX Length = 234 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 40/215 (18%), Positives = 82/215 (38%), Gaps = 19/215 (8%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPE--ALVMLDGDQDG 58 +++ + D Q + G ++ + + + A E + L + P +V++D Sbjct: 10 IRVALVDDQQMVRAGFRMVIDSQPDMTVVAEAGDGVEALRVLGALPVRADVVLMDVRMPR 69 Query: 59 EFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAA 118 +V++ T ++ E I + +D+ E A+ + Sbjct: 70 MDGLTATAALTSGADAPRVVVLTTFDIDEYVLEAIRSGASGFMLKDAPPEEMLGAIRTVH 129 Query: 119 MGMMFLPGDWR-----------------TTPEKDIKDLKSLSARQREILTMLAAGESNKE 161 G + T P L +L+ R+RE+L ++A G SN E Sbjct: 130 AGDAVIAPSSTRRLLEHLVTALPTPAPDTPPSPAHAALATLTDREREVLELMARGRSNTE 189 Query: 162 IGRALNISTGTVKAHLESLYRRLEVKNRTQAAMML 196 I L ++ TVK H+ + +L+ ++R QA ++ Sbjct: 190 IAADLFVAEATVKTHVGRILAKLDARDRVQAVVLA 224 >UniRef50_Q1GI23 Two component transcriptional regulator, LuxR family n=35 Tax=Rhodobacterales RepID=Q1GI23_SILST Length = 214 Score = 194 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 4/202 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESY-PEALVMLDGDQDGE 59 M+I++ D + + L G I + ++LE P LV+LD + G Sbjct: 11 MRILLADDHDMVRDTISAYLASE-GGAQITATTDLPRAMKELEDNGPFDLVLLDYNMPGM 69 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 LQ+ + V I + R Q+ + + +P+ ++ AV + Sbjct: 70 NGLDGLQRALKANGGRGVAILSGSAPTRTAQDALDAGAIGFIPKTMGAQSLLNAVRFMSA 129 Query: 120 GMMFLPGDW--RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHL 177 G +++P + + L LS R+ E+L+ L G+SNKEI R LN+ T+K H+ Sbjct: 130 GEIYVPVELMREEASAPEHPLLAQLSPREVEVLSGLCRGQSNKEIARDLNLQEVTIKLHV 189 Query: 178 ESLYRRLEVKNRTQAAMMLNIS 199 +L R+L+ KNRTQAAM + Sbjct: 190 RTLCRKLDAKNRTQAAMTAKEA 211 >UniRef50_B4CV47 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CV47_9BACT Length = 209 Score = 194 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 80/196 (40%), Gaps = 1/196 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + +++ D + G+ ++L+ + A +E+ + +V+LD G Sbjct: 6 IGVLLVDDHFMVRRGLAVALRVEKDLAVVAEAGNCEEMLAAYRQHRPDVVLLDWRLPGPN 65 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + P +VL+ + + + V + + A+ + G Sbjct: 66 GAEATALLREEHPGARVLMLSALDGDEHIHLAVRAGAAGYVLKSAERGEIIQAIRAVHGG 125 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 + + ++ +S R+RE+L AAGE NKEIG L IS TVK + + Sbjct: 126 KSYFSPGLEALLHDRARKVE-ISPREREVLVRAAAGERNKEIGDHLGISEATVKVFMARI 184 Query: 181 YRRLEVKNRTQAAMML 196 +++L+ ++R A ++ Sbjct: 185 FQKLDARDRAHAVVIA 200 >UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6ADI3_LEIXX Length = 207 Score = 194 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 47/195 (24%), Positives = 82/195 (42%), Gaps = 2/195 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDG-E 59 ++IV+ D I HGM+ L + + +E L+S +V++D G Sbjct: 2 IRIVLVDDHPILRHGMRTLLDTQEDFEVVGDCGDPEEYRLLLKSARPDIVLMDLALGGDT 61 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 L T P VL+ T + + + +DST A+ +A Sbjct: 62 DGVALTAHTRATSPSTAVLVFTTYDSDADFVRSLDAGASGYLLKDSTPVELFAAIRTARD 121 Query: 120 GMMFLPGDWRTT-PEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLE 178 G L + ++ +SL+ R+ E+L +LA G +N+++G L +S TVK H+ Sbjct: 122 GGSALSPAVASRLMDRMRAPQESLTPREIEVLALLATGRTNRQVGERLFVSETTVKTHVN 181 Query: 179 SLYRRLEVKNRTQAA 193 ++ +L V R A Sbjct: 182 HIFTKLGVDTRAAAV 196 >UniRef50_Q67JS2 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67JS2_SYMTH Length = 211 Score = 194 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 88/206 (42%), Gaps = 7/206 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G+K L + + A+ E S +V+LD Sbjct: 3 IRVLIVDDHELLREGLKSLLSREEDMEVVGEAAGGREAVALCRSLRPDVVVLDARLPDVD 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + ++ + PEV VL+ T + + + V +D ++ + A G Sbjct: 63 GVEVCRQLQEEMPEVAVLMLTTFSDSDLVLGAVRAGARGYVVKDVLGMDLKRSIRAVARG 122 Query: 121 MMFLPG-------DWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 + + +P D ++ L+ +Q I+ ++A G +N+EI + +S TV Sbjct: 123 EVAMDPKVVGYLMQQMRSPSADKEERIPLNRQQLAIIRLVAQGYTNREIAERMFLSEKTV 182 Query: 174 KAHLESLYRRLEVKNRTQAAMMLNIS 199 K +L RR+ VKNR +AAM+ + + Sbjct: 183 KGYLAEAMRRMGVKNRVEAAMVASKN 208 >UniRef50_Q1IK52 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=Q1IK52_ACIBL Length = 211 Score = 194 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 85/196 (43%), Gaps = 1/196 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I+ + + G+ + + V + A+ + + ++ + ++D G Sbjct: 9 IRILSVEDHPVVREGLVSIIGSQPDMVLVAQATNGSDAIAQFRTHHPDITLMDLRLPGIS 68 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L +FP +V+I T + + + A + + + + S G Sbjct: 69 GTDALISIRGEFPRARVIILTTSDSHTEIDRALRAGAAAYILKSMPMNEMLAVIRSVHAG 128 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 +P + + ++I + +SL++R+ E+L ++ G NK+I L+IS TV H++++ Sbjct: 129 ARHIPQEVASRLAENIGE-ESLTSRELEVLHLIRDGHRNKQIADELSISETTVNFHIKNI 187 Query: 181 YRRLEVKNRTQAAMML 196 ++ +RT A + Sbjct: 188 VGKMGANDRTHAVTIA 203 >UniRef50_A3WDJ9 Two-component response regulator n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WDJ9_9SPHN Length = 217 Score = 194 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 11/204 (5%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQG-ASQADELWQKLESYPEALVMLDGDQ-DGE 59 +I++ D + G++ L G+ + G AS +E + S ++++D DG Sbjct: 5 RILIVDDHQLAREGLRAVLAG--DGMEVVGLASTGEEAVELAGSLVPDVILMDVRLGDGI 62 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 ++ V +KV++ +++E + V +D+ + A+N Sbjct: 63 DGLEATRQVVALGLPIKVVMLTLHEMPGYVREALAAGAAGYVLKDTEIGDLRAAINQVMA 122 Query: 120 GMMFLPGDWRTT-------PEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 G LP D + PE + L++R++E++ ++A G +NKEI R L+IS T Sbjct: 123 GQSALPLDLVSAAMRAENRPEPKGDLSQILTSREQEVVELVAEGLTNKEIARKLDISPAT 182 Query: 173 VKAHLESLYRRLEVKNRTQAAMML 196 VK H+E L +L V +RTQAA+M Sbjct: 183 VKVHVERLIGKLGVADRTQAAVMA 206 >UniRef50_C1XS11 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XS11_9DEIN Length = 204 Score = 194 bits (494), Expect = 1e-48, Method: Composition-based stats. Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 1/199 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D I G+K L + A +E K + LV+LD Sbjct: 3 LRLLIVDDHPIVREGLKAFLGLYADLEVVGEADSGEEALSKSRALSPDLVLLDLQLSDGH 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L + + KVLI + + L++ + + + + + +A G Sbjct: 63 GLSFLPRFLSLPNPPKVLILTSFLEEDRLRQALSLGASGYLVKHAGPVALLEGIRAAGRG 122 Query: 121 MMFL-PGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLES 179 + L P R L SL+ ++RE+LT LA G SNK I +AL +S T+K H+ S Sbjct: 123 EVPLDPAAVRLLARPARNPLASLTPKEREVLTHLARGMSNKAIAQALGVSEKTIKTHVSS 182 Query: 180 LYRRLEVKNRTQAAMMLNI 198 L +L +K RTQAA++ Sbjct: 183 LLAKLNLKGRTQAALLARE 201 >UniRef50_B5IX99 Response regulator receiver domain protein n=2 Tax=Rhodobacteraceae RepID=B5IX99_9RHOB Length = 220 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 4/198 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLES-YPEALVMLDGDQDGE 59 M+I++ D + + L++ ++ DE +++E P LV+LD + G Sbjct: 1 MKILIADDHDLLRDMLVQFLEKEGSFQTV-AVGTFDEAAERIEKDDPYDLVLLDYNMPGM 59 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 L+ + +V + + + K+ + + VP+ ++ A+ AM Sbjct: 60 NGLDGLKAAIALGGGQRVALISGEATKQIAEVALEAGAAGFVPKSLPAKSLVNAIKFMAM 119 Query: 120 GMMFLPGDWRTTPEKDIKD--LKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHL 177 G + P D+ T E+ + L+ R+ ++L L G+SNKEI R L I TVK H+ Sbjct: 120 GEQYAPIDFMTAVEQTPTNPLADKLTERELQMLKGLTEGKSNKEIARDLEIREPTVKLHM 179 Query: 178 ESLYRRLEVKNRTQAAMM 195 ++LYR++ V NRTQAA++ Sbjct: 180 KTLYRKVGVANRTQAALI 197 >UniRef50_C6QEY3 Two component transcriptional regulator, LuxR family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QEY3_9RHIZ Length = 225 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 49/202 (24%), Positives = 90/202 (44%), Gaps = 9/202 (4%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESY-PEALVMLDGDQDGEF 60 +I++ D +F+ ++ ++ P A D + LES P +V+LD G Sbjct: 6 RILIVDDHPLFVEALQRAIVGACPDTETHDAVSIDAAKKVLESKTPFDIVLLDLALPGTR 65 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + L + P + +++ + + R +Q+V+ + + + + A A+ G Sbjct: 66 GFEGLLELRKLHPSLPIVVVSALEDPRIVQDVMRYGAAGFISKSADRSEIASALKDVMEG 125 Query: 121 MMFLPGDWRTTPEKD--------IKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 + LP ++ + LK L+ +Q +L ML G NK+I L I T Sbjct: 126 SLTLPKGYKPPEAPTNAEARGDLVHRLKMLTPKQLSVLRMLRQGLLNKQIAHELQIEETT 185 Query: 173 VKAHLESLYRRLEVKNRTQAAM 194 VKAH+ + R+L V +RTQA + Sbjct: 186 VKAHVSEILRKLNVSSRTQAVI 207 >UniRef50_B4D2I0 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2I0_9BACT Length = 209 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 36/196 (18%), Positives = 79/196 (40%), Gaps = 1/196 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G+ SL+ + A E + + + +LD Sbjct: 6 IRLMLADDHFMVRMGLATSLKLEPDFEIVAEADTGKEAISFYQHHRPDVALLDCRLPDMT 65 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + Q ++LI + + + + + + +++ A+ + G Sbjct: 66 GIEVTQALRAADATARILILSAFNGEEDVFRAVQAGAESYLLKNARRTEIVTAIRTVHAG 125 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 + P + ++ + L+ R++ +L + G SNKEIG L I+ VK H+ L Sbjct: 126 SPYFPPEISAILAARMRR-EELTPREKSVLFEIVKGSSNKEIGCCLEITESAVKIHVTHL 184 Query: 181 YRRLEVKNRTQAAMML 196 ++L K+RT AA + Sbjct: 185 LQKLNAKDRTHAATIA 200 >UniRef50_B0UJT9 Two component transcriptional regulator, LuxR family n=11 Tax=Alphaproteobacteria RepID=B0UJT9_METS4 Length = 251 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 42/203 (20%), Positives = 85/203 (41%), Gaps = 9/203 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYP-EALVMLDGDQDGE 59 M +++ D +F + +++ P +++ A + L L +LD G Sbjct: 32 MHLMIVDDHPLFREALTSAVRLAFPAAAVEEADGIEAACAALSRLRSVDLTLLDLSMRGV 91 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 + L +FP + +L+ + + R ++E + VP+ + A+ Sbjct: 92 NGFDGLLAIRTRFPRIPILVVSGMDDPRIVREALSHGAAGFVPKAAGKAVLTRAITDVLN 151 Query: 120 GMMFLPGDWRTTPEKDIK--------DLKSLSARQREILTMLAAGESNKEIGRALNISTG 171 G +F+P + + + L+ +Q +L M+ G+ NK+I L + Sbjct: 152 GAIFVPDGVGAQEGEAPRGGKPPIAQRIAELTPQQVRVLLMIRQGKLNKQIAHELGVGDS 211 Query: 172 TVKAHLESLYRRLEVKNRTQAAM 194 TVKAH+ + R+L V +RTQ + Sbjct: 212 TVKAHVSEILRKLGVISRTQIVI 234 >UniRef50_A0NNP3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NNP3_9RHOB Length = 205 Score = 194 bits (493), Expect = 2e-48, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 80/194 (41%), Gaps = 5/194 (2%) Query: 4 VMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCYW 63 ++ D + G++ LQ+ + A+ E ++++D Sbjct: 1 MLADDHELVRDGIRARLQKVADLEVVGEATNGREALTLAHDLRPDVLLMDVSMPVMNGLE 60 Query: 64 LLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMF 123 + PE+ VLI + N +++ V+ + +D + A+ S A G + Sbjct: 61 AATQMRKLLPEIAVLILSVYDNPEYVRGVVQAGARGYILKDISAAEMITAITSVASGGYY 120 Query: 124 LPGDWRTTP-----EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLE 178 T ++D L+ R+R++LT +A G+ NKE+ + L IS TV++H Sbjct: 121 FSSAVGPTLVGAGTSAPVEDPYGLTDRERQVLTAIARGQPNKEVAKELGISVRTVESHRL 180 Query: 179 SLYRRLEVKNRTQA 192 +L ++ KN Q Sbjct: 181 NLREKVGNKNAAQL 194 >UniRef50_Q3SFT3 Two Component Transcriptional Regulator, LuxR family n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SFT3_THIDA Length = 224 Score = 194 bits (493), Expect = 2e-48, Method: Composition-based stats. Identities = 48/208 (23%), Positives = 96/208 (46%), Gaps = 11/208 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPE-ALVMLDGDQDGE 59 ++ ++ D + G++ L Q P V I A L+ + + + L ++D + G Sbjct: 11 LKTLLADDHPLMREGVRQVLSQLEPPVEIIDAHDYPSLFAQTALHADLDLAVVDLNMPGF 70 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 + + +FP+V +++ + + ++ V+ L +P+ ++ T A+ Sbjct: 71 VGVQGISQFRARFPDVPLVVLSASESSHDIRSVLEAGALGYIPKAASSATMLAALQQVLA 130 Query: 120 GMMFLP----------GDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIS 169 G +++P T + D L+ARQ E+ +LA G +NK I +L +S Sbjct: 131 GDIYIPTCPPAVREDGPRGARTADFDALQHSGLTARQLEVARLLAQGCANKAIAGSLAMS 190 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMMLN 197 TVK H+ +++R L V NRT+A + + Sbjct: 191 ESTVKVHIAAIFRALSVTNRTEAVLAIQ 218 >UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0B0G6_SYNWW Length = 213 Score = 194 bits (493), Expect = 2e-48, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 85/201 (42%), Gaps = 7/201 (3%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 ++V+ D + G++ L+ I ++++D + G Sbjct: 5 RVVIADDHVLVREGLRKLLELDSNIKVIDEVGDGQGAINIARKEKPDIIIMDVNMPGTDG 64 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 + + P V+++ + + +++ A + +D ++ G Sbjct: 65 IVATRVIKRELPSVRIIALTVYEGEEVV-DMVKAGASAYILKDVAGSELVDTIHRVMNGE 123 Query: 122 MFLPGDWRTTPEKDIKDLKS------LSARQREILTMLAAGESNKEIGRALNISTGTVKA 175 + + ++++ ++ L+ R++++LT+L G +NKE+ + IS TVK Sbjct: 124 VVIYPRVANRLVRELRQSENRKSEIRLTKREKDVLTLLVKGNTNKEMAEVMFISEKTVKN 183 Query: 176 HLESLYRRLEVKNRTQAAMML 196 HL S++R+L VK+RT AA+ Sbjct: 184 HLTSIFRKLGVKDRTHAAIYA 204 >UniRef50_C1A9U5 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9U5_GEMAT Length = 223 Score = 194 bits (493), Expect = 2e-48, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 78/196 (39%), Gaps = 8/196 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D ++ G++ L + AS + +V+LD E Sbjct: 11 IRVLIADDHALVREGLRYVLDADPGIEVVGEASNGRTAVDLALQHVPDVVVLDITMPEES 70 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + P+ +VL+ + +++E + + +DS E A+ + G Sbjct: 71 GLKAAARLREALPDTRVLLLSMHDQGEYVREGMRIGTHGYLLKDSAGEELRAAIRAVHAG 130 Query: 121 MMFLPGDWRTTPEK--------DIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 F L L+ R+R++L +A G +NK I L IS T Sbjct: 131 GTFFSPAVVRRLTSTEVVSEGAPAAQLDLLTPRERDVLAGVARGLTNKAIAAELGISRRT 190 Query: 173 VKAHLESLYRRLEVKN 188 V+AH ESL R+L++ + Sbjct: 191 VEAHRESLMRKLQIHS 206 >UniRef50_A1VT42 Two component transcriptional regulator, LuxR family n=7 Tax=cellular organisms RepID=A1VT42_POLNA Length = 224 Score = 194 bits (493), Expect = 2e-48, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 80/200 (40%), Gaps = 7/200 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKL----ESYPEALVMLDGDQ 56 +++++ D G+++ L+ + A DE Q + +V+ D Sbjct: 5 IRLILVDDHPFVRDGVRMRLEATDDIRVVGEAGSVDEAMQLATDLGDERAPHIVLTDISM 64 Query: 57 DGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS 116 G L +FP + VL+ + N +++ I V +D+ + A+ + Sbjct: 65 RGMSGIELAALFQHRFPGIDVLVLSMHNNLEYVKRAIESGAKGYVLKDAPAQELVNAIRA 124 Query: 117 AAMGMMFLPGDWRTTPE---KDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 G F + + E L+ ++ L LA G SNK+I R L++S TV Sbjct: 125 VHAGETFFSPELQQYTEGFRASSGGNSPLTPKESATLAWLACGYSNKQIARELSMSVRTV 184 Query: 174 KAHLESLYRRLEVKNRTQAA 193 + H +L R+L + + + Sbjct: 185 ETHRLNLRRKLRITGQAELV 204 >UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVU6_9BACT Length = 216 Score = 194 bits (493), Expect = 2e-48, Method: Composition-based stats. Identities = 42/203 (20%), Positives = 82/203 (40%), Gaps = 8/203 (3%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 +I++ D S+F GM+ L + + AS +E L + +V +D G Sbjct: 5 RIILVDDHSLFRSGMRGLLDRYDGIRVVGEASTGEEFLAMLPATEADVVFMDFAMPGMNG 64 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 +K + P +KV+ + ++ + ++ + +DS ++ A+ + A G Sbjct: 65 AETTEKALALEPGLKVITLSMFGDENYYSRMVQAGAKGFLMKDSPMDEVLRAIETVAAGG 124 Query: 122 MFLPGDWRTTPEKDIKDL--------KSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 + + + ++ + LS R+ EIL + G SN+EI L IS TV Sbjct: 125 TYFCEEVLRSLASRMQTAVSGYEGSDERLSTREIEILVCVCRGLSNQEIADELFISKRTV 184 Query: 174 KAHLESLYRRLEVKNRTQAAMML 196 H ++ + KN + Sbjct: 185 DKHRANILEKTGCKNTASLVVYA 207 >UniRef50_Q3SG39 Two Component Transcriptional Regulator, LuxR family n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SG39_THIDA Length = 221 Score = 194 bits (493), Expect = 2e-48, Method: Composition-based stats. Identities = 46/203 (22%), Positives = 86/203 (42%), Gaps = 8/203 (3%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 +I++ D ++F G+ L+Q DE+ L+++ +++LD + G Sbjct: 5 RIILVDDHTLFRKGLAELLEQSGEIEVTAFTGNPDEVAMLLKAHRPDVLILDLNMPGTDG 64 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 L+Q+ + +LI + L + + + + A+ A G Sbjct: 65 ITLMQQLRNAGFALPILILTLSETEDDLARALRAGANGYLLKSMEPDEVVDAILRAQRGE 124 Query: 122 MFLPGDWRTTP--------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 + + L +L+ R+REIL+ L+ GESNK I R L+IS TV Sbjct: 125 TVVAPAMTAKLVKLYDQKGQDAGSLLDALTPREREILSHLSRGESNKAIARTLDISHDTV 184 Query: 174 KAHLESLYRRLEVKNRTQAAMML 196 K H+ + +L + +R +AA+ Sbjct: 185 KLHVRHILAKLNLSSRVEAAVFA 207 >UniRef50_A4BEK3 Putative transcriptional regulator, LuxR family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BEK3_9GAMM Length = 218 Score = 194 bits (493), Expect = 2e-48, Method: Composition-based stats. Identities = 44/201 (21%), Positives = 90/201 (44%), Gaps = 6/201 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + I++ D +F + +L Q +SIQ + + L++LD Sbjct: 10 LNILIADDHPLFRQALSEALGQTRHTISIQQVQTLADTLAAADQGDIDLILLDLKMPDCV 69 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L + + PE + + + + + +++V + + + +E+ A+N+ G Sbjct: 70 GLMGLIELREKHPETAIAVVTANESSQTMRKVRSAGAVGYLIKSMELESLVNALNTLLEG 129 Query: 121 MMFLPGD------WRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVK 174 F + +K L SL+ +Q+ +L++++ G NK+I L+I TVK Sbjct: 130 GRFFSLEGIQDPQDIDDDIDAMKKLASLTPKQQHVLSLISRGYLNKQIAYELDIKETTVK 189 Query: 175 AHLESLYRRLEVKNRTQAAMM 195 H+ ++R+L + NRTQAA+ Sbjct: 190 THVSEIFRKLGIFNRTQAAIF 210 >UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QY5_SYMTH Length = 218 Score = 193 bits (492), Expect = 2e-48, Method: Composition-based stats. Identities = 41/203 (20%), Positives = 82/203 (40%), Gaps = 11/203 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 M++++ D + G+ L I AS E + + LV++D + Sbjct: 1 MKVLIVDDHLMLRKGVLSVLS-NTDLEVIGEASNGQEALELVPKLKPDLVLMDINMPVLD 59 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +K +P++KV+I + L E I + ++ E ++ +A G Sbjct: 60 GVEATRKLKQMYPDLKVVILTVSEIDKDLFEAIKAGADGYLLKNLGPEELVSSLRAAISG 119 Query: 121 MMFLPGDWRTTPEKDIK----------DLKSLSARQREILTMLAAGESNKEIGRALNIST 170 + K+ + + LS R+ E+L + + G + KEI L ++ Sbjct: 120 EAPISSVMAAKMLKEFRQPRANTTGKQPGQQLSPREIEVLRLASTGLTYKEIAAKLYVAE 179 Query: 171 GTVKAHLESLYRRLEVKNRTQAA 193 TVK H+ + +L ++NR++A Sbjct: 180 STVKNHMRHILEKLHLRNRSEAV 202 >UniRef50_Q1YMP2 Two component response regulator n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YMP2_MOBAS Length = 250 Score = 193 bits (492), Expect = 3e-48, Method: Composition-based stats. Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 6/204 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 M++V+ D ++F G++ LQ+ V + A+ ADELWQ L + L+++D G Sbjct: 1 MKLVVADGHALFRAGLRYLLQELADVVEVHEAATADELWQLLSAGSYDLILVDHLLGGLE 60 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + V + + ++ + +P+DS+ A+N G Sbjct: 61 HGSEIGNIRRRTGGAPVAVVSGKDEPAMIRAALDDGAAGFIPKDSSPRLMIQALNLILAG 120 Query: 121 MMFLPGDWRT------TPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVK 174 +LP + E+ SL+ARQ E+ LA G SNK+I R+L +S G VK Sbjct: 121 GFYLPPTILSLLPRVRAGERPDPQRVSLTARQAEVWNHLAKGASNKQIARSLGLSEGAVK 180 Query: 175 AHLESLYRRLEVKNRTQAAMMLNI 198 AH+ L R L +NRT+A + Sbjct: 181 AHVAGLLRLLGARNRTEALVRAGA 204 >UniRef50_A1AXR1 Two component transcriptional regulator, LuxR family n=2 Tax=sulfur-oxidizing symbionts RepID=A1AXR1_RUTMC Length = 209 Score = 193 bits (491), Expect = 3e-48, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 96/206 (46%), Gaps = 10/206 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 M+I + D ++F +G+ L+ + +S A+ ++ ++ S +++LD Sbjct: 1 MKIYIIDDHTLFRNGLIALLESKQ--ISASAAASPEQGLAEIPSLSVDIILLDLRMPQMS 58 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +L+ + +++ T + L+ + + +D + A+N G Sbjct: 59 GLEVLKTLKEKNITTPIVMLTTSTQEYDLRNCLKHGAQGYLLKDMDPDELVDALNEVVKG 118 Query: 121 MMFLPGDWRTTPEKDIKD--------LKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 + + D K ++D SL++R++E+ +++G SNK I R L IS GT Sbjct: 119 SIVVAQDMTYILAKALRDELTDNEPSFDSLTSREKEVACQVSSGYSNKVIARELGISDGT 178 Query: 173 VKAHLESLYRRLEVKNRTQAAMMLNI 198 VK H++S+ ++L + +R + A+M+ Sbjct: 179 VKLHVKSILKKLSLSSRVEVAVMVTQ 204 >UniRef50_C4RMY6 Two-component system response regulator n=5 Tax=Actinomycetales RepID=C4RMY6_9ACTO Length = 226 Score = 193 bits (491), Expect = 4e-48, Method: Composition-based stats. Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 11/206 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D +++ G + L G+ A D+ Q ++ LV+LD Sbjct: 9 IRVLVVDDEALVRMGFQHILNAA-DGIQTAAAVSGDQALQAVQELRPDLVLLDIRMPDVD 67 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +LQ V + T ++ + + +D+ E V + A G Sbjct: 68 GLTILQSIRRLPAPPVVAMLTTFDTDEYVTAALRAGAAGFLLKDTDPEQLGHLVRTLAAG 127 Query: 121 MMFLPGDWRTTP----------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIST 170 L T E ++ ++ L+ R+RE+LT+LA G SN EIG + +S Sbjct: 128 DTVLASKVTRTVVDGFLRSGGDEHAVRAVQRLTEREREVLTLLADGLSNSEIGGRMFLSA 187 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 GTVK H+ ++ +L V NR +AA++ Sbjct: 188 GTVKDHVSAILTKLGVDNRVRAALLA 213 >UniRef50_C5CKC0 Two component transcriptional regulator, LuxR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CKC0_VARPS Length = 227 Score = 193 bits (491), Expect = 4e-48, Method: Composition-based stats. Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 24/221 (10%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 M+I++ D + I +K L + PG+ A DEL L ++D + G Sbjct: 1 MKILIADDHRLVIEAVKAKLSELGPGIEFVLAMSVDELLAGATDEL-DLALIDLNMPGAD 59 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + + P V V++ + + ++ + VL +P+ + E AV G Sbjct: 60 GQAHIDEIRRRHPAVPVIVLSGYEDPAIMRSALERGVLGFIPKAYSPEVMLSAVRLVLAG 119 Query: 121 MMFLPGDWRTTPEKDI-----------------------KDLKSLSARQREILTMLAAGE 157 +++P T I L+ RQ E+L +L+ G+ Sbjct: 120 GVYVPPMMLTALPPGIVAGVAPTQNGDARSAGASSQTLEHLRSVLTERQVEVLQLLSQGK 179 Query: 158 SNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNI 198 NK IGR+L IS GTVK HL +++R L V+NRT+A + Sbjct: 180 PNKLIGRSLGISEGTVKIHLAAIFRALNVRNRTEAVVAAQA 220 >UniRef50_UPI000050F8A6 two component transcriptional regulator, LuxR family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F8A6 Length = 222 Score = 192 bits (490), Expect = 4e-48, Method: Composition-based stats. Identities = 46/219 (21%), Positives = 88/219 (40%), Gaps = 20/219 (9%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D +S+ G+++ L I A+ E + L+++D Sbjct: 3 IRVIIADDESLMRSGLRLLLGAADDIDIIAEAANGAEAIELARELSPDLILMDIRMPVMD 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + Q +VLI ++ + + + +D+ E AV +AA G Sbjct: 63 GLEATRALMAQTLHPEVLILTAFGTDEFVLQALRSGAAGYILKDTPPEDLIHAVRAAANG 122 Query: 121 MMFLPGDWR--------------------TTPEKDIKDLKSLSARQREILTMLAAGESNK 160 L + L+ L+ R+REI +A G +N Sbjct: 123 TRTLSPSAVESLLGRDTTSATGVAGASNWNSVPIGPDPLEPLTTREREIAEAVAQGMTNA 182 Query: 161 EIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 ++ RAL +ST TVK HL ++ +L+V R Q A+++N Sbjct: 183 QVARALFVSTATVKTHLARIFYKLDVSTRVQLALLVNER 221 >UniRef50_D1VBH1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=D1VBH1_9ACTO Length = 248 Score = 192 bits (490), Expect = 5e-48, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 81/213 (38%), Gaps = 14/213 (6%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + + G + ++ + A+ ++ +V++D Sbjct: 26 IRVLIADDEGLVRAGFRALVEATPDLTVVAEAADGVAAVRESRRLRPDVVLMDIRMPVMN 85 Query: 61 CYWLLQKTVVQF--PEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAA 118 + P +L+ T + ++ E + + +D+ E A+ + A Sbjct: 86 GLEATRLIAADAVRPGPGILVVTTFDDDEYVFEALRAGAAGFILKDTQPENLLAAIRTVA 145 Query: 119 MGMMFLPGDWRTT--------PEKDIKDL----KSLSARQREILTMLAAGESNKEIGRAL 166 G L P L +L+ R+R +LT +A G SN EI +AL Sbjct: 146 AGDALLAPGVTRRLIAAFVRVPAPPASPLTGLASTLTDRERAVLTQIANGYSNAEIAQAL 205 Query: 167 NISTGTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 +S TVK H+ L +L ++R Q + S Sbjct: 206 YVSVSTVKTHVGHLLAKLAARDRAQLVIAAYES 238 >UniRef50_A6UGI4 Two component transcriptional regulator, LuxR family n=3 Tax=Alphaproteobacteria RepID=A6UGI4_SINMW Length = 229 Score = 192 bits (489), Expect = 5e-48, Method: Composition-based stats. Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 10/207 (4%) Query: 4 VMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLE-SYPEALVMLDGDQDGEFCY 62 ++ D ++ + +++ I+ A+ E Q+L + L+MLD + Sbjct: 17 LVIDDHPLYCDALAATMESTFNTRRIRTATSLSEALQQLRLRFSPDLIMLDLNLPDASGL 76 Query: 63 WLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMM 122 K + P++ V++ + + +Q V+ +P+D F A+ G Sbjct: 77 SGFLKIKEKMPDIPVIVISAFTSHDVVQSVMAAGAAGFIPKDIDRHNFQEAMQDIWNGKT 136 Query: 123 FLPGDWR---------TTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 ++P + + E + + LS +Q IL+++ G NK I + ++ TV Sbjct: 137 YVPPGYAVQARATAADQSAETISRKIAHLSQQQTRILSLICEGMPNKLIAYEMQLAEATV 196 Query: 174 KAHLESLYRRLEVKNRTQAAMMLNISS 200 KAH+ +L RRL V NRTQAAM++ S Sbjct: 197 KAHITALLRRLGVHNRTQAAMLVREVS 223 >UniRef50_D0LYS4 Two component transcriptional regulator, LuxR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS4_HALO1 Length = 212 Score = 192 bits (489), Expect = 5e-48, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 85/195 (43%), Gaps = 7/195 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I + D ++ GM+ L Q + AS E + ++ +++LD + Sbjct: 2 IKIAIADDHALLREGMRRMLSQSELIEVVGEASNGAEAVEVVKEKAPDVLLLDITMPVKD 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + K+LI + ++++ + + + + +E A+ G Sbjct: 62 GIEATADILALNVNTKILILSMHADEQYALRTLRAGANGFISKGARLEELLKAITDVHEG 121 Query: 121 MMFLPGDWRTT-------PEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 +LP T+ P+ + +++LS R+ +++T LA G +N+EI L IS TV Sbjct: 122 QRYLPDKIATSFAERHIRPDAEKPLVETLSKREFQVMTHLAQGMTNREIAGVLQISVKTV 181 Query: 174 KAHLESLYRRLEVKN 188 H + ++LE++N Sbjct: 182 DTHRSHVLKKLELRN 196 >UniRef50_Q73CG3 DNA-binding response regulator, LuxR family n=10 Tax=Firmicutes RepID=Q73CG3_BACC1 Length = 214 Score = 192 bits (489), Expect = 6e-48, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 85/202 (42%), Gaps = 8/202 (3%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 +++ D + G+K+ ++ I A+ +E +E ++++D + Sbjct: 4 NVLIVDDHFVVREGLKLIIETSDSFQIIGEATNGEEALSFIEKKKPDVILMDLNMPKMSG 63 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 ++ + ++I T + + I + +D+ E + +A G Sbjct: 64 LETIEVLNKKQNHTPIIILTTYNEDELMLKGIELGAKGYLLKDTDRENLFRTLEAAIRGE 123 Query: 122 MFLPGDW--------RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 + L + R ++ + +L+ ++ +L +A G NK+I + I+ TV Sbjct: 124 ILLQPNIMEKIVNYKRKEIHANVVEENNLTEKELFVLKAIARGNKNKDIAFDMGIAERTV 183 Query: 174 KAHLESLYRRLEVKNRTQAAMM 195 KA+L ++Y +L V +R++A + Sbjct: 184 KAYLTNIYNKLGVNSRSEAVAV 205 >UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD Length = 217 Score = 192 bits (489), Expect = 6e-48, Method: Composition-based stats. Identities = 47/204 (23%), Positives = 92/204 (45%), Gaps = 11/204 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++IV+ D ++ G+K+ L I AS +E +++ LV+LD Sbjct: 5 LRIVLADDHAVLRAGLKVLLNAEPDLEVIGEASDGEEAIDRVDDLHPDLVLLDLTMPKLN 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +++ + + ++K+L+ ++ +L+ V+ V + + A+ + A G Sbjct: 65 GVDCIEELLKKHADLKILVLTMHDDEEYLKAVLQVGAKGYVLKKAADVELLSAIRTVARG 124 Query: 121 MMFLPGDWRT-----------TPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIS 169 MF+ PEK+ K LK LS R+ E+L LA G +N++I L++S Sbjct: 125 EMFIYPTMAAEFVYRHLVSPREPEKESKKLKQLSERELEVLRNLALGHTNQDIADLLHVS 184 Query: 170 TGTVKAHLESLYRRLEVKNRTQAA 193 TV+ + + +LE+ R + Sbjct: 185 VKTVETYKARVMEKLEMHKRAELV 208 >UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04VJ6_LEPBJ Length = 221 Score = 192 bits (489), Expect = 6e-48, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 86/209 (41%), Gaps = 16/209 (7%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 +I + D +I G+K+ L + + A++ ++ LV+ D G Sbjct: 7 KIFLVDDHAILREGLKMILSGQFE--ICGESGDAEKALDQIGKLNPDLVITDISMPGLSG 64 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 L++ Q+P ++ +I + N+ ++Q+++ + V +D A+ + G Sbjct: 65 IDLVKNLRKQYPNIRTIILSRHDNREYVQKLLELGINGYVLKDDAGNDLLRAIEAVHKGE 124 Query: 122 MFLPGDWRT--------------TPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALN 167 +L + K LS R+REIL ++A G SN+ IG+ L Sbjct: 125 TYLSPGITAHFLSGFVGSGKPGEENQDAKKAFSVLSDREREILKLVAEGNSNESIGKILG 184 Query: 168 ISTGTVKAHLESLYRRLEVKNRTQAAMML 196 IS TVK H ++ ++L + M Sbjct: 185 ISPATVKVHRANIMKKLNLHKVADLVMYA 213 >UniRef50_A6SW03 DNA-binding response regulator, LuxR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SW03_JANMA Length = 213 Score = 192 bits (489), Expect = 6e-48, Method: Composition-based stats. Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 6/203 (2%) Query: 3 IVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEA-LVMLDGDQDGEFC 61 +++ D ++F G+ ++L Q P + I + +E Q LE+ M+D Sbjct: 4 VLLIDDHAMFREGLTLALTQADPTLQIHCVASGNEALQLLETETSISTAMMDYYLPDIGG 63 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 LLQ+ P +++L + + ++ + + + + +T A++S G Sbjct: 64 GALLQRLRQLRPGLRILALSASEDPDDVRHALASGAHGFIHKSADSKTLFAALSSVMQGR 123 Query: 122 MFLPGDWRTT-----PEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAH 176 +LP ++ D L L+ RQ E+L ++ G N EI L ++ TVKAH Sbjct: 124 GYLPPTFKLDTHDGGSNDDASLLSRLTPRQMEVLRLMCDGLRNGEIADQLGMTEKTVKAH 183 Query: 177 LESLYRRLEVKNRTQAAMMLNIS 199 + ++ L V NRTQA ++ + Sbjct: 184 VSAVLSGLGVLNRTQATVVARRA 206 >UniRef50_B8EIF2 Two component transcriptional regulator, LuxR family n=1 Tax=Methylocella silvestris BL2 RepID=B8EIF2_METSB Length = 209 Score = 192 bits (489), Expect = 6e-48, Method: Composition-based stats. Identities = 53/198 (26%), Positives = 102/198 (51%), Gaps = 2/198 (1%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIP--GVSIQGASQADELWQKLESYPEALVMLDGDQDGE 59 ++++ D +F + + Q +P G+++ A+ +L++ +E+ L++LD G Sbjct: 3 KVLIADDHPVFRRALGDIVGQLLPSTGLAVVEAADRTQLFEIVENDDVDLILLDLCMPGM 62 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 L P V+I + + + + I+ +P+ S++E A A+ Sbjct: 63 TGLPELVAIRNIAPATPVVIISAIDDTTIVNQAINCGAAGFIPKSSSMEDLAAALKQVLD 122 Query: 120 GMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLES 179 G +++PG ++ + +L+ RQ +L +L+AG+SNKEI RAL+IS TVK H+ + Sbjct: 123 GGVYIPGSDEAREKRGPAEADALTPRQLAVLGLLSAGKSNKEIARALSISDLTVKVHITT 182 Query: 180 LYRRLEVKNRTQAAMMLN 197 ++R+L V RTQA + Sbjct: 183 IFRKLGVATRTQAIVAFQ 200 >UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3 Tax=Proteobacteria RepID=Q313W8_DESDG Length = 223 Score = 192 bits (489), Expect = 6e-48, Method: Composition-based stats. Identities = 40/200 (20%), Positives = 80/200 (40%), Gaps = 10/200 (5%) Query: 3 IVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCY 62 +++ + ++ G+K LQ + AS + LV++D Sbjct: 7 LIIAEDHTLLREGLKSLLQSVPHLIVTGEASDGQMAVDLCDRNQPELVLMDISMPRMDGV 66 Query: 63 WLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMM 122 + + PEV+VL+ ++ + V +D++ + F LAV S G + Sbjct: 67 QATRLIKKRHPEVRVLVLTVHGAGEYVYAALAAGADGYVLKDASNDEFILAVESVLGGKI 126 Query: 123 FLPGDWR----------TTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 +L + ++L+ R++EI ++A G N+EI L +S T Sbjct: 127 YLSPGVSDAVVKGYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREIAEMLVVSVKT 186 Query: 173 VKAHLESLYRRLEVKNRTQA 192 V+ H +L ++L V + + Sbjct: 187 VEKHRSNLMQKLGVHSAAEL 206 >UniRef50_B9YZJ3 Two component transcriptional regulator, LuxR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YZJ3_9NEIS Length = 217 Score = 192 bits (489), Expect = 6e-48, Method: Composition-based stats. Identities = 48/209 (22%), Positives = 94/209 (44%), Gaps = 13/209 (6%) Query: 3 IVMFDRQSIFIHGMKISLQQRI-PGVSIQGASQADELWQKLESYPEA-LVMLDGDQDGEF 60 +++ D +F M++ + + G I D + P L M+D + G Sbjct: 5 VLIADDHPLFREAMRLVVSSALGEGSEIVECESLDAALDAVRRNPAIELAMIDINMPGMD 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L + Q P + V++ + D ++ + +P+ + ++ AVN+ G Sbjct: 65 GLAGLARLRQQAPTLPVIVVSADERHSTVEAAMSVGASGFIPKSFSRDSMTEAVNAVLGG 124 Query: 121 MMFLPGDWR--------TTPEK---DIKDLKSLSARQREILTMLAAGESNKEIGRALNIS 169 ++LP ++PE+ L L+ ++R +L + G+SNK + LNI+ Sbjct: 125 DIYLPPSLADRDTGVPGSSPEQLQDLASRLALLTKQERCVLDYIVGGKSNKVVAIELNIA 184 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMMLNI 198 TVKAH+ ++ R+L+V +RTQA + + Sbjct: 185 ESTVKAHVSAILRKLKVSSRTQAVIKVGA 213 >UniRef50_Q5WJ71 Two-component response regulator n=5 Tax=Bacillaceae RepID=Q5WJ71_BACSK Length = 210 Score = 192 bits (489), Expect = 7e-48, Method: Composition-based stats. Identities = 44/203 (21%), Positives = 94/203 (46%), Gaps = 10/203 (4%) Query: 3 IVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCY 62 I++ + Q I G+K+ ++ R + A E + LV++D Sbjct: 4 ILLAEDQQIVRQGLKMMIEHRQ-RYQVIEAENGQEAVDLAGRHVIDLVLMDVRMPVMTGI 62 Query: 63 WLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMM 122 ++ + + P VK+++ T ++R+ E + + +D+ +E+ + A +G + Sbjct: 63 EATKRLIERDPNVKIVMLTTFIDERYAIEALKAGAKGYILKDADMESLFATIEKALLGEL 122 Query: 123 FLPGDWRT---------TPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 L G + ++ + + L+ R++EI+ ++ G +N EI L +S GTV Sbjct: 123 VLDGQVAAKVMPKLLQHSAPQEKEQIPPLAEREKEIIRLVGQGRNNAEIAAELYLSVGTV 182 Query: 174 KAHLESLYRRLEVKNRTQAAMML 196 K ++ L+ +L V++RTQ A+ Sbjct: 183 KNYISQLFIKLGVRDRTQLAIFA 205 >UniRef50_C7RBI1 Two component transcriptional regulator, LuxR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBI1_KANKD Length = 212 Score = 192 bits (488), Expect = 7e-48, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 87/201 (43%), Gaps = 8/201 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D +I G+ L + + AS E +K + ++D Sbjct: 2 IRVMLADDHTILRQGLVSLLSKDADCTVVAEASNGLEAVEKALETRPQVAVIDISMPELN 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++++ + PE K+L+ + ++ ++ + +DS E AV + A G Sbjct: 62 GMEVVKRIHDKLPECKILVLTMHEEQEYVIHMVRAGASGYLLKDSASEELIDAVKALATG 121 Query: 121 MMFLP-------GDWRTTPEKDIKD-LKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 + + P+K+ +D K+L+ R+RE+ ++ G++ K+I R L+IS T Sbjct: 122 KTYYSQYAASVLATQYSQPDKEWQDPYKNLTQREREVFHLVVDGKTTKDIARTLDISVKT 181 Query: 173 VKAHLESLYRRLEVKNRTQAA 193 + H + +L V N + Sbjct: 182 AENHRGKVLDKLGVSNTAELV 202 >UniRef50_A6TNJ5 Two component transcriptional regulator, LuxR family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TNJ5_ALKMQ Length = 212 Score = 192 bits (488), Expect = 8e-48, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 88/201 (43%), Gaps = 4/201 (1%) Query: 3 IVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCY 62 I++ D +I +G++ +++ A E + K+ +V+LD Sbjct: 8 ILLVDDHAIVRYGIRSLIERNDGLKVCGEAGTLQEAYHKVSDLKPDIVLLDIKLPDGDGA 67 Query: 63 WLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMM 122 ++ + P+VKV+I + E + + +D + A+ + G Sbjct: 68 AGCREIKKRVPDVKVIILTAYAEDSIILEAVKAGAEGYLLKDIDSKNIITAIRNVVGGKT 127 Query: 123 FLPGDWRTTPEKDIK----DLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLE 178 L + + ++K L+++ + IL +++ G+SNK+I + + +S TV+ + Sbjct: 128 SLANEAISKVLNEVKQNCSGEDDLTSQDKSILELISQGKSNKDIAKEIYVSEKTVRNNAS 187 Query: 179 SLYRRLEVKNRTQAAMMLNIS 199 +++++ NRT+AA+ + Sbjct: 188 RIFKKINAGNRTEAAIYWSKR 208 >UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B1ZVM0_OPITP Length = 219 Score = 192 bits (488), Expect = 8e-48, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 84/197 (42%), Gaps = 9/197 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++IV+ D ++ G++ L++ + A E + ++ + ++D G Sbjct: 5 LKIVLADDHALVRAGIRTLLEKLPGVTIVGEAGDGRETVTLVHTFAPDIAIMDITMPGLN 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + + P KVLI + + ++ + + + +D+ LA+N+ G Sbjct: 65 GFDATARIAREHPRTKVLILSMHTAEDYVLQALRAGATGYLLKDAATAELQLALNAVRKG 124 Query: 121 MMFLPGDWRTTP---------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTG 171 +L + + + K+L+ R REI+ ++A G S KEI LN+S Sbjct: 125 ETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIAFLLNLSVK 184 Query: 172 TVKAHLESLYRRLEVKN 188 T++ H L RL + + Sbjct: 185 TIETHRMHLMARLGLHD 201 >UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37 Tax=Bacteria RepID=D1AEE5_THECD Length = 244 Score = 192 bits (488), Expect = 8e-48, Method: Composition-based stats. Identities = 40/204 (19%), Positives = 81/204 (39%), Gaps = 13/204 (6%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLES-----YPEALVMLDGDQ 56 +I++ D ++ G+++ L + A E +++ L +LD Sbjct: 29 RILLADDHALVRRGVRLILDGEPDLWVVGEAGDGAEAIEQVRRRAGTPQEVDLAVLDVAM 88 Query: 57 DGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS 116 ++ +P +++LI N+++L E + V + A + Sbjct: 89 PRMTGLQAARELSRMYPRLRILILTMHDNEQYLFEALKAGAAGYVLKSLADRDLVQACRA 148 Query: 117 AAMGMMFLPG--------DWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNI 168 A G FL + + + L+ R+ EIL ++A G S++EI L I Sbjct: 149 AVRGEPFLYPGAISVLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSREIADTLFI 208 Query: 169 STGTVKAHLESLYRRLEVKNRTQA 192 S TV+ H ++ +L +K+R + Sbjct: 209 SVKTVERHRANILAKLGMKDRLEL 232 >UniRef50_C6W2Z0 Two component transcriptional regulator, LuxR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W2Z0_DYAFD Length = 205 Score = 192 bits (488), Expect = 8e-48, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 1/189 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D + + G+K L + A+ A E L+ + LD + Sbjct: 3 VRILIVDDHPLVLEGLKSLLADAEGVQVVGTATNAIEAIAFLKGNEVDIAFLDINLPDIS 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L +K QFPEVK L +T + ++ +I + + S E A+ G Sbjct: 63 GIDLCKKVKDQFPEVKTLALSTFNERAYVSRMIQNGASGYLIKSSGKEDILEAIAQVQAG 122 Query: 121 MMFLPGDW-RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLES 179 F+ + + TP K + L+ R++E+L ++A G +N +I L IS TV +H ++ Sbjct: 123 GYFMNVQFDQVTPATAPKTVPFLTRREKEVLVLIAEGLTNPQIAEQLFISVTTVNSHRQN 182 Query: 180 LYRRLEVKN 188 L + EV N Sbjct: 183 LLIKFEVSN 191 >UniRef50_D1B9T1 Two component transcriptional regulator, LuxR family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9T1_THEAS Length = 227 Score = 192 bits (488), Expect = 9e-48, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 83/203 (40%), Gaps = 7/203 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++IV+ D +F G++ L+ I A D + + + +++ D + Sbjct: 4 IRIVLADDHRLFRDGLRRLLEMEKDMEVIGEAEDGDATVEMVSALKPDVLLFDIHMPKKD 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +++ + + + + + + A V + S + A+ S G Sbjct: 64 GIQVVKDLKAMGCSPRFVAITAFDDDDHITALSSVGIDAYVLKASGMAELLSAIRSVYRG 123 Query: 121 MMFLPGDWR-------TTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 ++ ++ L L+ R+ E+L ++ G +N EI R + +S TV Sbjct: 124 HSYVDPKVAGKLLSTFNRRREERDLLSRLTPREMEVLYWISQGLNNGEIARKMVLSEKTV 183 Query: 174 KAHLESLYRRLEVKNRTQAAMML 196 K H+ + ++L++ +RTQAA+ Sbjct: 184 KNHVSHILKKLDLVDRTQAAVFA 206 >UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYF0_9SPHI Length = 218 Score = 192 bits (488), Expect = 9e-48, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 82/208 (39%), Gaps = 12/208 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++ + D +F G+ L+ + GA EL K+++ P ++++D Sbjct: 3 VKVAIADDHVLFRKGLVTILELDDNIEVVYGADNGKELIDKVDAQPPDVILMDLKMPVMD 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + ++PEVKVL+ + ++++ + + +++ + A+ + Sbjct: 63 GMEATKIIKAKYPEVKVLVLSMYDEEKFIIHCLELGANGYLLKNTDPDELVHAIGTVMAK 122 Query: 121 MMFLPGDW------------RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNI 168 + R + ++ L+ R++E+L ++ + E+ L I Sbjct: 123 DFYFNNHISTVMLKGLNQKKRAKGKPQFENSIELTKREQEVLELICKELTTPEMAEKLFI 182 Query: 169 STGTVKAHLESLYRRLEVKNRTQAAMML 196 S TV+ H ++L + KN + Sbjct: 183 SNRTVEGHRKNLLEKTGAKNTAGLVVFA 210 >UniRef50_Q48AG6 DNA-binding response regulator, LuxR family n=4 Tax=Alteromonadales RepID=Q48AG6_COLP3 Length = 219 Score = 191 bits (487), Expect = 1e-47, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 6/205 (2%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKL-ESYPEALVMLDGDQDGEF 60 +I++ D +F + +L+ ++ A +EL Q+L + L++LD + G Sbjct: 6 KIIIADDHPLFRQALLGTLKAKLTYTVWLEAQTIEELEQQLTNNNDSDLLLLDLNIPGAH 65 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + L FP++ V+I + + + + + + VP+ + V+ A+ + G Sbjct: 66 GFNTLIHVRNHFPQIPVVIVSAHEDHDTISKAMSYGAAGFVPKSTPVDDIYSAIVAVLSG 125 Query: 121 MMFLPGDWRTTPEKD-----IKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKA 175 +LP + + + + SL+ +Q IL M A G NK+I LN+S T+KA Sbjct: 126 DTWLPASFEQKQRDNSDGDIAERVASLTQQQYRILMMFAQGMLNKQIAYDLNVSEATIKA 185 Query: 176 HLESLYRRLEVKNRTQAAMMLNISS 200 H +++R+L+V+NRTQA + + S Sbjct: 186 HATAIFRKLDVRNRTQAVIAIAQLS 210 >UniRef50_D1BGN7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=4 Tax=Actinomycetales RepID=D1BGN7_SANKS Length = 258 Score = 191 bits (487), Expect = 1e-47, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 89/212 (41%), Gaps = 14/212 (6%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D Q +F G+ + + + + A+ E + ++ +V++D Sbjct: 34 IRVLLVDDQELFRSGIAVIVDAQDGLEVVGQAADGSEAVRMVDDLSPDVVLMDVRMPELD 93 Query: 61 CYWLLQKT------VVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAV 114 ++ + V+V++ T I + + +D+T A+ Sbjct: 94 GVEATRQIFAPARAASRAGPVRVIVLTTFDLDDRAAAAIRYGASGFLLKDATPAMLRDAI 153 Query: 115 NSAAMGMMFLPGDWRTTP--------EKDIKDLKSLSARQREILTMLAAGESNKEIGRAL 166 + G L D +T L+ L+ ++RE+L +AAG +N EI R Sbjct: 154 RTVHAGNAVLAPDDLSTLLDGRFRARRPSPPGLEDLTPKEREVLAAVAAGLNNAEIARRA 213 Query: 167 NISTGTVKAHLESLYRRLEVKNRTQAAMMLNI 198 +S TVK H+ ++ R+L +++R Q ++ + Sbjct: 214 FVSESTVKTHVGAVLRKLGLRDRVQVVVLAHE 245 >UniRef50_C4KQQ0 Transcriptional regulatory protein DegU (Protease production enhancerprotein) n=83 Tax=Betaproteobacteria RepID=C4KQQ0_BURPS Length = 233 Score = 191 bits (487), Expect = 1e-47, Method: Composition-based stats. Identities = 45/218 (20%), Positives = 89/218 (40%), Gaps = 22/218 (10%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D ++F G+K+ LQ++ + AS E ++ + + +++LD + G Sbjct: 3 IRVLLIDDHTLFRSGVKLLLQRQPDFEVVDEASDGVEGVKRAKQHQPDVILLDLNMPGLS 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 LQ V P V+I + L + + ++ ET + AA G Sbjct: 63 GLETLQLLVQDVPSAHVVILTVSEDAEELTTALRDGACGFLVKNIDAETLVAGIRKAAAG 122 Query: 121 MMFLPGDWRT----------------------TPEKDIKDLKSLSARQREILTMLAAGES 158 + D L+ R+ +I+ LA G S Sbjct: 123 EPVIAESMTAKWIASLRAPVPAARPAPAAALAPAAHASVDPDQLTPREHDIVRALARGAS 182 Query: 159 NKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMML 196 NKEI R +++ TVK H++++ ++L + +R Q A+ Sbjct: 183 NKEIAREFDVAESTVKIHVQNVLKKLNLSSRVQIAVYA 220 >UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria RepID=Q2LSF1_SYNAS Length = 217 Score = 191 bits (487), Expect = 1e-47, Method: Composition-based stats. Identities = 32/202 (15%), Positives = 75/202 (37%), Gaps = 9/202 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + +++ D I G++ L+ + A + ++++D Sbjct: 3 VNVLLADDHKIVRDGLRTLLETHGSMNVVAEAENGQKTITLARELHPEIIIMDISMPDMN 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +K P +KV+ + ++ ++ ++ + +D E A+ + Sbjct: 63 GIDATRKITSDLPGIKVIALSMHADRHFVIGMLEAGASGYLLKDCAFEELVNAIQTVLSN 122 Query: 121 MMFLPGDWR---------TTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTG 171 +L + L+ R+RE+L +LA G S K+I L++S Sbjct: 123 HTYLSPTIADIVVKNYVHKAAGTSVVVSSELTPRERELLQLLAEGLSAKQIAANLHVSVK 182 Query: 172 TVKAHLESLYRRLEVKNRTQAA 193 TV+ H ++ ++L V + + Sbjct: 183 TVETHRRNITQKLGVGSVAELI 204 >UniRef50_D0CQV3 Transcriptional regulatory protein DegU n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CQV3_9RHOB Length = 213 Score = 191 bits (486), Expect = 1e-47, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 84/207 (40%), Gaps = 11/207 (5%) Query: 3 IVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCY 62 IV+ D IF G++ +L + A+E + + LV+LD G Sbjct: 5 IVLADDHPIFRDGLRKTLDDSGEFKVLAAGCDAEEAVRLTREHRPDLVILDLSMPG-GGL 63 Query: 63 WLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMM 122 ++ ++ I + + + + + + T ++ S A G Sbjct: 64 GATRQIAALGDAPRIAILTVSEDSNDVADALEAGATGYILKGVTASALTKSLRSIAKGEG 123 Query: 123 FLPGDWRT----------TPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 F+ + TP D L L+ R+ EIL +A G SNKEI L+I T Sbjct: 124 FVSPGLASRVLLAIQKGNTPTGDRGVLGDLTHREEEILRRVAKGLSNKEIAAELSIQEKT 183 Query: 173 VKAHLESLYRRLEVKNRTQAAMMLNIS 199 VK ++ S+ +L +NR +AA++ + + Sbjct: 184 VKHYMTSILSKLHARNRVEAALIAHEA 210 >UniRef50_A1RC88 Two-component system response regulator n=8 Tax=Actinomycetales RepID=A1RC88_ARTAT Length = 218 Score = 191 bits (486), Expect = 1e-47, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 10/209 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESY-----PEALVMLDGD 55 +++++ D + G++ L + AS+ D +L P LV++D Sbjct: 4 IRVLLVDDHPVVRAGLRAMLADFPGVTVVAEASEGDAALVELSKLHTLGEPVDLVLMDLQ 63 Query: 56 QD-GEFCYWLLQKTVVQ---FPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFA 111 G +K P VLI T + + + +D+ E Sbjct: 64 MGSGMDGVTATEKIKAGEGGNPPPPVLILTTYDTDADILAAVEAGASGYMLKDAPPEQIR 123 Query: 112 LAVNSAAMGMMFLPGDWRTTPEKDIKDLKS-LSARQREILTMLAAGESNKEIGRALNIST 170 AV SAA G L + I++ LS R+ ++L +LA G SN+ + + L IS Sbjct: 124 QAVLSAAAGQTALAPEVAARLMGRIRNPSPALSGREVQLLELLATGMSNRAMAKQLFISE 183 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 TVK HL +Y +L V NRT A + Sbjct: 184 ATVKTHLVHIYSKLGVDNRTAAIAVATQR 212 >UniRef50_C4DCK3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=3 Tax=Actinomycetales RepID=C4DCK3_9ACTO Length = 214 Score = 191 bits (486), Expect = 1e-47, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 80/205 (39%), Gaps = 9/205 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D Q + G+++ + + A + LV++D G Sbjct: 2 IRVLLVDDQRLIRAGLRMLCEPAADIEVVGEADGGQAAVRLAGELCPDLVLMDLRMPGMD 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 Q+ + + P +V+ T + L + + +D++ A+ AA G Sbjct: 62 GITATQRILAERPSTRVVALTTFDDDDHLYPALAAGACGFLVKDTSPNELLEAIRKAADG 121 Query: 121 ---------MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTG 171 + R L L+ R+RE+L ++ AG +N +I L++ Sbjct: 122 DTPFSAGVVKRIVDSAVRARASVPTATLPKLTTREREVLALVGAGYANVDIAERLHLGVT 181 Query: 172 TVKAHLESLYRRLEVKNRTQAAMML 196 TVK H+ SL + NR + A++ Sbjct: 182 TVKTHIASLMTKTGCSNRVRLAVLA 206 >UniRef50_P31802 Nitrate/nitrite response regulator protein narP n=142 Tax=Bacteria RepID=NARP_ECOLI Length = 215 Score = 191 bits (486), Expect = 1e-47, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 75/200 (37%), Gaps = 6/200 (3%) Query: 3 IVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCY 62 +++ D + G++ L+ + A +++LD + G Sbjct: 9 VMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGL 68 Query: 63 WLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMM 122 L +++I + +I + +DS E A+ + A G Sbjct: 69 DTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSK 128 Query: 123 FLPGDW------RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAH 176 R + L+ R+ ++L LA G SNK+I LNIS TVK H Sbjct: 129 VFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVKVH 188 Query: 177 LESLYRRLEVKNRTQAAMML 196 + +L R+L V++R A ++ Sbjct: 189 IRNLLRKLNVRSRVAATILF 208 >UniRef50_C5EHQ3 Two-component protein Kinase n=4 Tax=Clostridiales RepID=C5EHQ3_9FIRM Length = 209 Score = 190 bits (485), Expect = 1e-47, Method: Composition-based stats. Identities = 44/202 (21%), Positives = 90/202 (44%), Gaps = 7/202 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQG-ASQADELWQKLESYPEALVMLDGDQDGE 59 ++ V+ D I G+K L+Q G+ + G A+ E WQ +V++D Sbjct: 2 IKAVIADDIQILRQGLKAILEQ-DDGIEVAGLAADGREAWQLCRKLKPDVVLMDMRMPQY 60 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 + + + FP+++VL+ T ++ + + + ++ + +V + Sbjct: 61 DGSYGITRIKADFPDIRVLVLTTFDDRETVDAAVQGGADGYILKEMEDDKVIQSVKAVCA 120 Query: 120 GMMFLPGDW-----RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVK 174 G+ G R K L+ R+ +I+ ++A G N+EI L ++ GTV+ Sbjct: 121 GIRVFGGSVFEGMRRQMALPGAKADLDLTPREMDIMRLVAQGMDNREIAAGLFLAEGTVR 180 Query: 175 AHLESLYRRLEVKNRTQAAMML 196 ++ L +L++K+RTQ A+ Sbjct: 181 NNISRLLEKLKLKDRTQLAVFA 202 >UniRef50_C1YGP4 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Actinomycetales RepID=C1YGP4_NOCDA Length = 225 Score = 190 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 44/217 (20%), Positives = 88/217 (40%), Gaps = 20/217 (9%) Query: 3 IVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPE--ALVMLDGDQDGEF 60 +++ D Q + G++ L+ + A+ E + L + + ++D Sbjct: 6 VLIVDDQILMRQGLRKLLEIEEGVDVVGDAADGVEALEFLSAADPLPDVALVDARMPRMD 65 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L+ + ++P+V L+ T + + + + +D E A+ A G Sbjct: 66 GVALIGRMRAEYPDVPALVLTTFDDDELVFGGLRAGARGYLLKDVPPEELVAAIRRVARG 125 Query: 121 MMFLPGDWR------------TTPEKDIK------DLKSLSARQREILTMLAAGESNKEI 162 L G T P D + LS R+ E+ ++ G +N+E+ Sbjct: 126 ETVLGGPAAELLVAALGEGPSTVPAADPPRPPGHGEAPRLSEREEEVARLVGTGATNREV 185 Query: 163 GRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 RAL I+ GT K H+ S+ R+L +++RT+ A+ + Sbjct: 186 ARALFITEGTAKNHVTSILRKLGLRDRTRLALWVRER 222 >UniRef50_A3JWJ3 Two component transcriptional regulator, LuxR family protein n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JWJ3_9RHOB Length = 232 Score = 190 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 6/203 (2%) Query: 3 IVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYP-EALVMLDGDQDGEFC 61 +++ D +F +K++L I +L + P +L++LD + Sbjct: 21 VLIIDDHPLFCDALKLTLGSIANFNKIVAVDNLQAAISELSTSPLPSLILLDLNLPDASG 80 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 L K ++I ++ + ++ I VP+ S F A++ G Sbjct: 81 LNGLLKLKRVADNCPIIIVSSMTDTALIEGAITAGASGYVPKHSHRSVFKQAIDMIKEGG 140 Query: 122 MFLPGDWRTTPEKDIKD-----LKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAH 176 F P + ++D L SL+ +Q IL ++ G+ NK+I L I+ TVKAH Sbjct: 141 QFKPHGFTENVSTTVQDTVISRLASLTNQQARILELICEGKLNKQIAFELTIAETTVKAH 200 Query: 177 LESLYRRLEVKNRTQAAMMLNIS 199 + ++ R+L+V +RTQA ++ + Sbjct: 201 VTAIMRKLQVHSRTQAVLVAQEA 223 >UniRef50_Q0AL13 Two component transcriptional regulator, LuxR family n=1 Tax=Maricaulis maris MCS10 RepID=Q0AL13_MARMM Length = 201 Score = 190 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 4/195 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLES-YPEALVMLDGDQDGE 59 M+I++ D + + ++ L+ IP ++ +E+ + L LV+LD G Sbjct: 1 MKILIADDHDLVLDAVRALLENDIPDAEVELVRSGNEVERSLSDGNRYDLVLLDLRMPGI 60 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 ++ + + + V I + + +Q ++ +P+ + AV Sbjct: 61 AGVQDVRDLMKRHADQPVAILSGMASPMEVQMLLENGARGFIPKTMPADGLVAAVRLILA 120 Query: 120 GMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLES 179 G +F P T PE + SL+ R+RE+L L GE+NKEI R+L I TVK HL S Sbjct: 121 GQVFSPIHHTTDPENEP---ASLTPREREVLFCLQRGEANKEIARSLEIQETTVKLHLRS 177 Query: 180 LYRRLEVKNRTQAAM 194 L +L+ +NRT+ + Sbjct: 178 LSLKLDARNRTEVVV 192 >UniRef50_B4SJL0 Two component transcriptional regulator, LuxR family n=3 Tax=Stenotrophomonas RepID=B4SJL0_STRM5 Length = 224 Score = 190 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 9/205 (4%) Query: 3 IVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCY 62 +++ D +F + + ++ + + I A D + + LE L++LD G Sbjct: 4 LLIADDHPLFRAALHRAAEEAVADLQISEADSLDSVLEVLEHQQIDLMLLDLHMPGNHGL 63 Query: 63 WLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMM 122 L P + ++I + + + ++ + +P+ S + A+ S G Sbjct: 64 AGLATIRALQPGLAIIIVSANEEPQVIRRAVDLGAAGYLPKSSGLNELQSALQSVLEGER 123 Query: 123 FLPGDWRTTPEKDIK---------DLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 ++P R + L SLSA Q ++L+++A G NK+I L + TV Sbjct: 124 WIPALLREPVARVAPFSKDADLAARLASLSAHQYKVLSLVAEGLLNKQIADRLGVQLRTV 183 Query: 174 KAHLESLYRRLEVKNRTQAAMMLNI 198 KAH+ + RL V+NR QA +L+ Sbjct: 184 KAHMTRIMERLGVRNRAQAIRVLHE 208 >UniRef50_UPI0001C314AF two component transcriptional regulator, LuxR family n=2 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314AF Length = 228 Score = 190 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 36/196 (18%), Positives = 85/196 (43%), Gaps = 3/196 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++V+ D + G+++ L + A + + ++ +++LD + GE Sbjct: 14 IRVVIADDHRVVRSGLRMVLDAEPDIAVVAEAGDVPSAERAVRAHHPHVLVLDLNMPGEQ 73 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + V + PE V++ + + +E + V +++ + AV A G Sbjct: 74 SLPAIPRLVAELPETAVVVLTMQQDPAFAREALRSGARGYVLKEAADDELVQAVRLAREG 133 Query: 121 MMFLPGDWRTTPEKDIKDL---KSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHL 177 +L + + L+AR+ E+L ++A G +N EI + L +S TV++H Sbjct: 134 RTYLNPELGARMAAEPPPSGPPDDLTARELEVLRLIALGHTNAEIAQQLFLSIRTVESHR 193 Query: 178 ESLYRRLEVKNRTQAA 193 + +++ +R + Sbjct: 194 AHIQQKVRRSSRAELV 209 >UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, putative n=2 Tax=Shewanella RepID=B8CN77_SHEPW Length = 206 Score = 190 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 83/186 (44%), Gaps = 2/186 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D +F G++ L + A + + L P LV+ D + Sbjct: 2 IRVLLVDDHPLFREGLRYRLSLDSDIEVLAEADNGQQALEILNKMPVDLVLTDINMPQMD 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +LL+ Q KV++ + NK ++ + + + +D + A+ A G Sbjct: 62 GMYLLELIKEQELSCKVVMLSMHDNKEYIMATMRYGADGYILKDVPGKELIEAIKKVAAG 121 Query: 121 MMFLPGDWRTTPEKDIKDLKS--LSARQREILTMLAAGESNKEIGRALNISTGTVKAHLE 178 + D T +++ K ++ R++ +L +++ G +NK I + +++S TV+ H Sbjct: 122 KRYFSADVINTLSQELASGKQALVTQREQLVLRLISLGMNNKRIAQEMDVSVRTVETHKR 181 Query: 179 SLYRRL 184 ++ ++L Sbjct: 182 NIKQKL 187 >UniRef50_D1Y4N4 Two component transcriptional regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y4N4_9BACT Length = 215 Score = 190 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 42/196 (21%), Positives = 84/196 (42%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + IV+ D + G+ + + + AS + W+ +E + +LD Sbjct: 2 ISIVLADDHPLTRAGLAALINEEEGLNLLGEASDGKQAWEMIEKLRPDVALLDIRMPEMD 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + +K KV++ + ++ + + + S V A+ S G Sbjct: 62 GITVARKVKDAKLPTKVIMLTAYNAQPYIVAALSAGARGFIVKTSAVMELTQALQSVIGG 121 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 ++L + + +L+ LS R+RE+L + + G KE+ L I+ TV+AHL S+ Sbjct: 122 GIYLDSAIANSVDSASNELEQLSPREREVLLLSSQGFPVKEVAAKLFITERTVQAHLSSV 181 Query: 181 YRRLEVKNRTQAAMML 196 Y + KN+T+A ++ Sbjct: 182 YAKFGAKNKTEALIIA 197 >UniRef50_A0RGC1 DNA-binding response regulator n=12 Tax=Bacillales RepID=A0RGC1_BACAH Length = 597 Score = 190 bits (484), Expect = 2e-47, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 83/213 (38%), Gaps = 15/213 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D Q++ + ++ L+ + + + A E E +V++D Sbjct: 381 IRLLVVDDQALITNSLEQILENQTDFIVVGKAYDGSEALILCEQLQPDIVLMDIQMPEMN 440 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L + ++P +K+++ T + + + + + A+ G Sbjct: 441 GIEALLEMKRRWPNMKIVLMTTFEDSLQAATALEHGAEGYMLKSIHPQEMKEALKLIYNG 500 Query: 121 MMFLPGDWRTTPEKDIKDLKS---------------LSARQREILTMLAAGESNKEIGRA 165 ++ T +++K + L+ R+ EIL L+ G K I Sbjct: 501 GTWIDQSVATRIFEEMKLQREQLAKIKSTKQTFPYGLTKREMEILEHLSNGLRYKSIAAK 560 Query: 166 LNISTGTVKAHLESLYRRLEVKNRTQAAMMLNI 198 L +S GT++ + +LY +L V NR +A M Sbjct: 561 LFLSEGTIRNYCSNLYSKLGVSNREEAIKMART 593 >UniRef50_Q11YW8 Two component transcriptional regulator, LuxR family n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YW8_CYTH3 Length = 215 Score = 190 bits (484), Expect = 2e-47, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 89/202 (44%), Gaps = 9/202 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + I++ D ++ G+K LQ + A+ DEL Q +++ +V+LD + Sbjct: 5 ISIIIADDHTLIRDGIKSLLQSVDEFEVVGEATDGDELIQFIDTLDPEIVVLDITMPKKS 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ + VK ++ + N ++ + + L+ + +++ E AV + + G Sbjct: 65 GIEVITEVKKYNNRVKFIVLSMHDNPEYVLKSVQSGALSYLLKNTDHEEIIKAVKAVSAG 124 Query: 121 MMFLPGDWRTTPEKDIKD---------LKSLSARQREILTMLAAGESNKEIGRALNISTG 171 + D + + + ++L+ R+ E+L ++ G S K I L IS Sbjct: 125 QKYFSPDIYSIILNGLANPELVKASQIAETLTKRELEVLKEVSMGLSTKLIADKLFISVR 184 Query: 172 TVKAHLESLYRRLEVKNRTQAA 193 TV+ H +L ++L+V N + Sbjct: 185 TVETHRINLMKKLDVHNSAELI 206 >UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM Length = 216 Score = 190 bits (484), Expect = 2e-47, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 87/200 (43%), Gaps = 7/200 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D ++ G+++ L + + A+ + +V+LD Sbjct: 4 IKVLIVDDHTLMRSGLRLMLSAQEDIEVVGEAADGSGGIAMAQKMRPDVVLLDISMPEMS 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L+ + P+++V++ + R+++E + V + + + AV + G Sbjct: 64 GLECLKTLLANQPDLRVILLTMHEDARYVKEGFALGAMGYVLKKAADDVLYQAVRAVYSG 123 Query: 121 MMFLPGDWRTTPEKDIKD-------LKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 M++ ++ + K LS +++++L+++AAG +N+EI L IS TV Sbjct: 124 EMYIQPSITKAVVAELTERPRADDLRKPLSDQEKKVLSLIAAGYANREIAEQLVISVKTV 183 Query: 174 KAHLESLYRRLEVKNRTQAA 193 + + + +L K R+ Sbjct: 184 ETYKYRIMEKLNCKKRSDLV 203 >UniRef50_B9PAD6 Predicted protein n=33 Tax=cellular organisms RepID=B9PAD6_POPTR Length = 326 Score = 190 bits (484), Expect = 2e-47, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 87/197 (44%), Gaps = 5/197 (2%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYP----EALVMLDGDQD 57 ++++ D ++ GM++ L + + A + L + LV+ D Sbjct: 116 RVLLIDDHALVRDGMRMHLTLQPGLEVVGEADDGEAALAWLAAAEAGRMPDLVITDIGMR 175 Query: 58 GEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSA 117 G L ++PE+ VLI + N ++++ I V +D+ + A+ + Sbjct: 176 GMGGIALAGALHDRYPELAVLIVSMHDNLEYVRQAIRAGARGYVLKDAPADELLAAIQAV 235 Query: 118 AMGMMFLPGDW-RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAH 176 G +F R + + L +L+ R+R+IL + G++NK+I L +S TV+ H Sbjct: 236 LAGRVFYSARIARGMAAQAVSPLDALTPRERDILHGIGRGQANKDIAVQLGVSVRTVETH 295 Query: 177 LESLYRRLEVKNRTQAA 193 +L R+L ++ R + Sbjct: 296 RLNLKRKLGIEGRAELV 312 >UniRef50_A3VS17 Putative two-component response regulator protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VS17_9PROT Length = 217 Score = 190 bits (484), Expect = 2e-47, Method: Composition-based stats. Identities = 47/203 (23%), Positives = 94/203 (46%), Gaps = 9/203 (4%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQ-DGEF 60 ++V+ D + G++++L QR V GA A E + ++ +V+LD DG Sbjct: 8 RLVIIDDHELAREGLRLALVQRGFEVVAVGA-TAAEAIELTQTTDPDVVLLDIRLRDGPD 66 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 V V++ + + +++ + + +D+ ++ + + G Sbjct: 67 GLAAAAGIKALNQSVAVVMLSLHDDADYVRAALKAGAKGYILKDTALDELCAELKTVLSG 126 Query: 121 MMFLPGDW-------RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 + +P + + ++ L+ R+RE+L +++ G++NK I R L IS TV Sbjct: 127 GVAIPQALLAAVLTPKAAAPPEYHLVERLTDREREVLRLISEGKTNKAIARELVISPATV 186 Query: 174 KAHLESLYRRLEVKNRTQAAMML 196 KAH+E +L +RTQAA+M+ Sbjct: 187 KAHVERCLAKLGAADRTQAAVMM 209 >UniRef50_C4ZM15 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZM15_THASP Length = 226 Score = 190 bits (484), Expect = 2e-47, Method: Composition-based stats. Identities = 44/196 (22%), Positives = 86/196 (43%), Gaps = 8/196 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 M++++ D S+ G++ L I+ AS + + + LV++D D Sbjct: 4 MRVLLVDDHSLVRAGIRALLGSIAGVAGIEEASSGRQAVELAATMQPDLVLMDIAMDDMD 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + P +KV+I + + ++ + + +D+ V +A+ + G Sbjct: 64 GLAATRTIAAAHPHIKVVILSMHDTGDFFEQALRCGARGYLLKDAAVAELEMAIAAVMRG 123 Query: 121 MMFLP--------GDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 ++L G+ P +D + L+ RQ EIL ++ +G KEI R L++S T Sbjct: 124 DVYLSPAVSRHLVGNMLARPPEDERAASVLTPRQTEILELIGSGLGTKEIARRLDLSVKT 183 Query: 173 VKAHLESLYRRLEVKN 188 V+AH + RL V++ Sbjct: 184 VEAHRAQIMERLGVRD 199 >UniRef50_A7HS72 Two component transcriptional regulator, LuxR family n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HS72_PARL1 Length = 213 Score = 190 bits (484), Expect = 2e-47, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 81/199 (40%), Gaps = 7/199 (3%) Query: 4 VMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCYW 63 + D + + L+ I + A ++ + + +LD G Sbjct: 7 YLIDDHHVLRQAVVEMLEAEEDISVIGQSGDARSGIGEIANLKPDVAILDLKMPGMTGLA 66 Query: 64 LLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMF 123 + + + P+ ++I N ++ E + V + ++ E AV + G + Sbjct: 67 AIGEILRAAPKTGIIIFTMYDNPAYVWETTNAGASGYVLKSASKEDLLRAVRAVHAGGGY 126 Query: 124 LPGDWR-------TTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAH 176 L + + +L++R+ ++L LA G+SNK I + L+I+ TVKAH Sbjct: 127 LQAEVTKPLLRRLAQDARTSGQKATLTSRELQVLECLADGQSNKMIAQTLSITEDTVKAH 186 Query: 177 LESLYRRLEVKNRTQAAMM 195 L+SLY +L +R A + Sbjct: 187 LKSLYEKLGASDRAHAVAI 205 >UniRef50_UPI0000E116E2 Response regulator, LuxR family (CheY, HTH domains) n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E116E2 Length = 212 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 88/201 (43%), Gaps = 8/201 (3%) Query: 4 VMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPE-ALVMLDGDQDGEFCY 62 ++ D +F ++ +L + I A ++ +P+ +++LD G + Sbjct: 5 LIADDHPLFREALQAALLPFFNDMEIIEADSLHNTISAIKKHPDIDVILLDLTMPGADHF 64 Query: 63 WLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMM 122 + L + + + V++ N+ + +H +P+ T A A+ + G Sbjct: 65 YGLTAVLDKCANIPVVVITATDNEESVNIAMHLGAKGFIPKSYTSRKMAHAIMNVLNGGT 124 Query: 123 FLPGDWRTTPEKDIKDL-------KSLSARQREILTMLAAGESNKEIGRALNISTGTVKA 175 F+P + ++ K L+ +Q ++ L G+ NKEI L ++ T+KA Sbjct: 125 FIPDRYIDAISSTHPEMLTAIELVKELTPKQLLVIKCLKQGKKNKEIAGELCVTEATIKA 184 Query: 176 HLESLYRRLEVKNRTQAAMML 196 H+ +++++L V +RTQ ++ Sbjct: 185 HISAIFKKLNVTSRTQIVLLF 205 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC... 285 5e-76 UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR fa... 280 2e-74 UniRef50_A8MF72 Two component transcriptional regulator, LuxR fa... 278 6e-74 UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti... 277 2e-73 UniRef50_A4J6C2 Two component transcriptional regulator, LuxR fa... 273 2e-72 UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=... 273 2e-72 UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa... 273 3e-72 UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=... 272 7e-72 UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus... 270 2e-71 UniRef50_C8WSR5 Two component transcriptional regulator, LuxR fa... 269 3e-71 UniRef50_B2A8K6 Two component transcriptional regulator, LuxR fa... 269 5e-71 UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 269 5e-71 UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas... 269 5e-71 UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax... 269 5e-71 UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteri... 268 5e-71 UniRef50_B0C955 Two-component transcriptional regulator, LuxR fa... 268 6e-71 UniRef50_B2J2N1 Two component transcriptional regulator, LuxR fa... 268 7e-71 UniRef50_A0LVS2 Two component transcriptional regulator, LuxR fa... 268 1e-70 UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillac... 267 1e-70 UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR fa... 267 1e-70 UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=... 267 1e-70 UniRef50_B5JFN7 Response regulator receiver domain protein n=1 T... 267 2e-70 UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Ac... 266 4e-70 UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteri... 266 4e-70 UniRef50_D1AAU8 Two component transcriptional regulator, LuxR fa... 265 5e-70 UniRef50_O07528 Uncharacterized transcriptional regulatory prote... 265 9e-70 UniRef50_C6D0G6 Two component transcriptional regulator, LuxR fa... 264 1e-69 UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR fa... 264 2e-69 UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Ta... 263 2e-69 UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus... 263 2e-69 UniRef50_C7MUJ2 Response regulator containing a CheY-like receiv... 263 2e-69 UniRef50_B0C756 Two-component transcriptional regulator, LuxR fa... 263 3e-69 UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=... 263 3e-69 UniRef50_B2J8J5 Two component transcriptional regulator, LuxR fa... 262 4e-69 UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacill... 262 4e-69 UniRef50_D1C1C8 Two component transcriptional regulator, LuxR fa... 262 7e-69 UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR fa... 261 1e-68 UniRef50_A5V148 Two component transcriptional regulator, LuxR fa... 261 1e-68 UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. ora... 261 1e-68 UniRef50_C6BTX3 Two component transcriptional regulator, LuxR fa... 261 1e-68 UniRef50_D1XHI5 Two component transcriptional regulator, LuxR fa... 260 1e-68 UniRef50_Q1AST2 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR fa... 259 3e-68 UniRef50_A7NP18 Two component transcriptional regulator, LuxR fa... 259 3e-68 UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenel... 259 3e-68 UniRef50_A3Y699 Putative two component system response regulator... 258 6e-68 UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa... 258 8e-68 UniRef50_B4CWX5 Two component transcriptional regulator, LuxR fa... 258 8e-68 UniRef50_B1ZY58 Two component transcriptional regulator, LuxR fa... 257 2e-67 UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR fa... 257 2e-67 UniRef50_UPI0001B502C9 two component LuxR family transcriptional... 256 3e-67 UniRef50_P94439 Uncharacterized transcriptional regulatory prote... 256 3e-67 UniRef50_Q024A4 Two component transcriptional regulator, LuxR fa... 256 3e-67 UniRef50_A3CKH3 Two-component system transcriptional regulator (... 255 4e-67 UniRef50_A9B5L0 Two component transcriptional regulator, LuxR fa... 255 7e-67 UniRef50_D1C6S1 Two component transcriptional regulator, LuxR fa... 255 7e-67 UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmic... 255 8e-67 UniRef50_B8FX94 Two component transcriptional regulator, LuxR fa... 255 8e-67 UniRef50_UPI0001789139 two component transcriptional regulator, ... 255 8e-67 UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut... 255 9e-67 UniRef50_A4VZN8 Response regulator containing a CheY-like receiv... 255 9e-67 UniRef50_C6CZA5 Two component transcriptional regulator, LuxR fa... 255 9e-67 UniRef50_P55184 Uncharacterized transcriptional regulatory prote... 254 1e-66 UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR fa... 254 1e-66 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 254 2e-66 UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides... 253 2e-66 UniRef50_A9AX03 Two component transcriptional regulator, LuxR fa... 253 2e-66 UniRef50_A9AZR3 Two component transcriptional regulator, LuxR fa... 253 2e-66 UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomyceta... 253 2e-66 UniRef50_C1B8T3 NarL family two-component response regulator n=6... 253 2e-66 UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR fa... 253 3e-66 UniRef50_A6TVR4 Two component transcriptional regulator, LuxR fa... 253 3e-66 UniRef50_B4D831 Two component transcriptional regulator, LuxR fa... 253 3e-66 UniRef50_D1VBH1 Two component transcriptional regulator, LuxR fa... 252 4e-66 UniRef50_A1SKW0 Two component transcriptional regulator, LuxR fa... 252 4e-66 UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococc... 252 5e-66 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 252 5e-66 UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR fa... 252 5e-66 UniRef50_C7R398 Two component transcriptional regulator, LuxR fa... 252 5e-66 UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiob... 252 6e-66 UniRef50_B9XAM6 Two component transcriptional regulator, LuxR fa... 252 6e-66 UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR fa... 251 6e-66 UniRef50_C4ZEG3 Two-component response regulator (Extracellular ... 251 7e-66 UniRef50_UPI00018507A5 two component LuxR family transcriptional... 251 7e-66 UniRef50_C0GJ72 Two component transcriptional regulator, LuxR fa... 251 8e-66 UniRef50_D1BX47 Two component transcriptional regulator, LuxR fa... 251 9e-66 UniRef50_C7MN84 Response regulator containing a CheY-like receiv... 251 1e-65 UniRef50_B4D808 Two component transcriptional regulator, LuxR fa... 251 1e-65 UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V... 251 1e-65 UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Act... 250 2e-65 UniRef50_A6M052 Two component transcriptional regulator, LuxR fa... 250 2e-65 UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=... 250 2e-65 UniRef50_A5URU4 Two component transcriptional regulator, LuxR fa... 250 2e-65 UniRef50_D1BCA8 Two component transcriptional regulator, LuxR fa... 250 3e-65 UniRef50_D1CF52 Two component transcriptional regulator, LuxR fa... 250 3e-65 UniRef50_B9MPQ9 Two component transcriptional regulator, LuxR fa... 249 3e-65 UniRef50_C5VAN3 Two component transcriptional regulator, LuxR fa... 249 3e-65 UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibac... 249 5e-65 UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR fa... 248 6e-65 UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 ... 248 6e-65 UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa... 248 6e-65 UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermop... 248 6e-65 UniRef50_C4DCK3 Response regulator containing a CheY-like receiv... 248 7e-65 UniRef50_A4FAA4 Two component system response regulator n=2 Tax=... 248 7e-65 UniRef50_C5C7H0 Response regulator containing a CheY-like receiv... 248 8e-65 UniRef50_B1ZU87 Two component transcriptional regulator, LuxR fa... 248 8e-65 UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa... 248 8e-65 UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphy... 248 9e-65 UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 T... 248 9e-65 UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR fa... 248 1e-64 UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 ... 248 1e-64 UniRef50_C7MLQ9 Response regulator containing a CheY-like receiv... 248 1e-64 UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ... 247 1e-64 UniRef50_C7NKN7 Response regulator containing a CheY-like receiv... 247 2e-64 UniRef50_D1B9T1 Two component transcriptional regulator, LuxR fa... 247 2e-64 UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Synt... 246 2e-64 UniRef50_C3JVF4 Two component transcriptional regulator, LuxR fa... 246 2e-64 UniRef50_A6TUG7 Two component transcriptional regulator, LuxR fa... 246 2e-64 UniRef50_C1TL62 Response regulator containing a CheY-like receiv... 246 3e-64 UniRef50_B8FDP3 Two component transcriptional regulator, LuxR fa... 246 3e-64 UniRef50_D1BGN7 Response regulator containing a CheY-like receiv... 246 3e-64 UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa... 246 3e-64 UniRef50_C0GHS5 Two component transcriptional regulator, LuxR fa... 246 4e-64 UniRef50_B1L0K3 DNA-binding response regulator, LuxR family n=22... 246 4e-64 UniRef50_UPI000050F8A6 two component transcriptional regulator, ... 246 4e-64 UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 T... 246 5e-64 UniRef50_D2SFS4 Two component transcriptional regulator, LuxR fa... 245 5e-64 UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexac... 245 6e-64 UniRef50_UPI0001789C57 two component transcriptional regulator, ... 245 6e-64 UniRef50_B4D2I0 Two component transcriptional regulator, LuxR fa... 245 6e-64 UniRef50_C4RJG1 Two-component system response regulator receiver... 245 6e-64 UniRef50_C1A730 NarL family two-component response regulator n=1... 245 7e-64 UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr... 245 8e-64 UniRef50_C1A9U5 NarL family two-component response regulator n=1... 245 8e-64 UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa... 245 8e-64 UniRef50_C7MRK0 Response regulator containing a CheY-like receiv... 245 9e-64 UniRef50_D1CI66 Two component transcriptional regulator, LuxR fa... 244 1e-63 UniRef50_B2A7N5 Two component transcriptional regulator, LuxR fa... 244 1e-63 UniRef50_Q027R2 Two component transcriptional regulator, LuxR fa... 244 1e-63 UniRef50_C1TQ52 Response regulator containing a CheY-like receiv... 244 1e-63 UniRef50_B9XC41 Two component transcriptional regulator, LuxR fa... 244 1e-63 UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsoni... 244 2e-63 UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa... 244 2e-63 UniRef50_Q5WI37 Two-component response regulator n=5 Tax=Bacilla... 243 2e-63 UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 ... 243 2e-63 UniRef50_UPI0001788591 two component transcriptional regulator, ... 243 2e-63 UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa... 243 2e-63 UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa... 243 2e-63 UniRef50_A8L3K7 Two component transcriptional regulator, LuxR fa... 243 3e-63 UniRef50_C4RJ91 Two-component system response regulator n=2 Tax=... 242 4e-63 UniRef50_C1RMQ2 Response regulator containing a CheY-like receiv... 242 4e-63 UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID... 242 5e-63 UniRef50_B4DBM9 Two component transcriptional regulator, LuxR fa... 242 5e-63 UniRef50_C7RBI1 Two component transcriptional regulator, LuxR fa... 242 5e-63 UniRef50_B8GUD1 Two component transcriptional regulator, LuxR fa... 242 5e-63 UniRef50_D2PZY5 Two component transcriptional regulator, LuxR fa... 242 6e-63 UniRef50_D1BXU0 Two component transcriptional regulator, LuxR fa... 242 6e-63 UniRef50_D2B5Y0 Response regulator receiver protein n=14 Tax=Act... 242 6e-63 UniRef50_Q024Y7 Two component transcriptional regulator, LuxR fa... 241 7e-63 UniRef50_D2Q2Q8 Two component transcriptional regulator, LuxR fa... 241 1e-62 UniRef50_A9B4P1 Two component transcriptional regulator, LuxR fa... 241 1e-62 UniRef50_B8G137 Two component transcriptional regulator, LuxR fa... 241 1e-62 UniRef50_C0Z4M7 Two-component response regulator n=7 Tax=Bacilla... 241 1e-62 UniRef50_D0LE76 Response regulator receiver n=2 Tax=Actinomyceta... 241 1e-62 UniRef50_C5B7B5 Nitrate/nitrite response regulator protein NarP ... 241 1e-62 UniRef50_A0RGC1 DNA-binding response regulator n=12 Tax=Bacillal... 241 1e-62 UniRef50_B9XL75 Two component transcriptional regulator, LuxR fa... 241 1e-62 UniRef50_C0INV4 Two component transcriptional regulator n=1 Tax=... 241 1e-62 UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeoba... 241 1e-62 UniRef50_C3AL44 Response regulator receiver n=3 Tax=Bacillus Rep... 240 2e-62 UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi... 240 2e-62 UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa... 240 2e-62 UniRef50_C1I7X4 Two-component system response regulator n=1 Tax=... 240 2e-62 UniRef50_C6WIC9 Two component transcriptional regulator, LuxR fa... 240 2e-62 UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR fa... 240 2e-62 UniRef50_Q67JS2 Two-component response regulator n=1 Tax=Symbiob... 240 3e-62 UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 ... 240 3e-62 UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=P... 239 4e-62 UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 ... 239 5e-62 UniRef50_B4D5C2 Two component transcriptional regulator, LuxR fa... 239 6e-62 UniRef50_B8GAC9 Two component transcriptional regulator, LuxR fa... 238 6e-62 UniRef50_UPI00017468E1 two-component response regulator n=1 Tax=... 238 6e-62 UniRef50_D0LYS4 Two component transcriptional regulator, LuxR fa... 238 6e-62 UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Baci... 238 6e-62 UniRef50_B2JVJ8 Two component transcriptional regulator, LuxR fa... 238 6e-62 UniRef50_A8ZMB6 Two-component transcriptional regulator, LuxR fa... 238 7e-62 UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistip... 238 1e-61 UniRef50_P31802 Nitrate/nitrite response regulator protein narP ... 238 1e-61 UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR fa... 238 1e-61 UniRef50_C2RNB5 Two-component protein Kinase n=1 Tax=Bacillus ce... 238 1e-61 UniRef50_Q1IK52 Two component transcriptional regulator, LuxR fa... 238 1e-61 UniRef50_B4CV47 Two component transcriptional regulator, LuxR fa... 237 1e-61 UniRef50_C5C8Q1 Response regulator containing a CheY-like receiv... 237 2e-61 UniRef50_C1XS11 Response regulator containing a CheY-like receiv... 237 2e-61 UniRef50_A9U739 Predicted protein n=2 Tax=cellular organisms Rep... 237 2e-61 UniRef50_A0NNP3 Response regulator containing a CheY-like receiv... 237 2e-61 UniRef50_A8LG56 Two component transcriptional regulator, LuxR fa... 237 2e-61 UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR fa... 236 2e-61 UniRef50_A8LHM9 Two component transcriptional regulator, LuxR fa... 236 2e-61 UniRef50_C0GF31 Two component transcriptional regulator, LuxR fa... 236 2e-61 UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, ... 236 2e-61 UniRef50_C1YGP4 Response regulator containing a CheY-like receiv... 236 3e-61 UniRef50_C0EEH8 Putative uncharacterized protein n=1 Tax=Clostri... 236 3e-61 UniRef50_B1KE04 Two component transcriptional regulator, LuxR fa... 236 3e-61 UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR fa... 236 3e-61 UniRef50_C6CWJ3 Two component transcriptional regulator, LuxR fa... 236 3e-61 UniRef50_B1Y743 Two component transcriptional regulator, LuxR fa... 236 3e-61 UniRef50_A6TNJ5 Two component transcriptional regulator, LuxR fa... 236 3e-61 UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paeniba... 236 3e-61 UniRef50_C4DCC2 Response regulator containing a CheY-like receiv... 236 3e-61 UniRef50_Q04VJ6 Receiver component of a two-component response r... 236 3e-61 UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=... 236 3e-61 UniRef50_C7QC31 Two component transcriptional regulator, LuxR fa... 236 4e-61 UniRef50_C8VWU8 Two component transcriptional regulator, LuxR fa... 236 4e-61 UniRef50_Q7NN43 Two-component response regulator n=2 Tax=Gloeoba... 236 4e-61 UniRef50_C8WS10 Two component transcriptional regulator, LuxR fa... 236 5e-61 UniRef50_B5JLS2 Response regulator receiver domain protein n=1 T... 235 5e-61 UniRef50_D2PZN7 Two component transcriptional regulator, LuxR fa... 235 5e-61 UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax... 235 5e-61 UniRef50_Q5WJ71 Two-component response regulator n=5 Tax=Bacilla... 235 5e-61 UniRef50_A8L345 Two component transcriptional regulator, LuxR fa... 235 6e-61 UniRef50_A5G586 Two component transcriptional regulator, LuxR fa... 235 7e-61 UniRef50_C7MXL4 Response regulator containing a CheY-like receiv... 235 7e-61 UniRef50_D1Y4N4 Two component transcriptional regulator, LuxR fa... 235 7e-61 UniRef50_A1RC88 Two-component system response regulator n=8 Tax=... 235 8e-61 UniRef50_B5JTE5 Two-component system regulatory protein n=1 Tax=... 235 8e-61 UniRef50_A1ATT6 Two component transcriptional regulator, LuxR fa... 235 9e-61 UniRef50_D2AWW3 Response regulator receiver protein n=6 Tax=Acti... 235 9e-61 UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator rece... 235 9e-61 UniRef50_C1F7G9 Two-component response regulator n=1 Tax=Acidoba... 235 9e-61 UniRef50_C5SGD8 Two component transcriptional regulator, LuxR fa... 235 9e-61 UniRef50_D1XLE6 Two component transcriptional regulator, LuxR fa... 235 1e-60 UniRef50_C4RI73 Two-component system response regulator n=6 Tax=... 234 1e-60 UniRef50_C1XWT0 Two component transcriptional regulator, LuxR fa... 234 1e-60 UniRef50_Q1LE49 Two component transcriptional regulator, LuxR fa... 234 1e-60 UniRef50_P44845 Nitrate/nitrite response regulator protein homol... 234 1e-60 UniRef50_D1C3I4 Two component transcriptional regulator, LuxR fa... 234 1e-60 UniRef50_Q73CG3 DNA-binding response regulator, LuxR family n=10... 234 1e-60 UniRef50_C4KQQ0 Transcriptional regulatory protein DegU (Proteas... 234 1e-60 UniRef50_C6XAG0 Two component transcriptional regulator, LuxR fa... 234 1e-60 UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Sele... 234 1e-60 UniRef50_C2AL02 Response regulator containing a CheY-like receiv... 234 2e-60 UniRef50_B1M5J4 Two component transcriptional regulator, LuxR fa... 234 2e-60 UniRef50_D2PS71 Two component transcriptional regulator, LuxR fa... 234 2e-60 UniRef50_Q15T22 Two component transcriptional regulator, LuxR fa... 234 2e-60 UniRef50_Q2W0D2 Response regulator containing a CheY-like receiv... 233 2e-60 UniRef50_C6C0G1 Two component transcriptional regulator, LuxR fa... 233 2e-60 Sequences not found previously or not previously below threshold: UniRef50_A9U6E4 Predicted protein (Fragment) n=1 Tax=Physcomitre... 239 4e-62 UniRef50_A9VLR5 Two component transcriptional regulator, LuxR fa... 235 1e-60 UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiob... 234 1e-60 >UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30 Tax=Bacillales RepID=B7GL14_ANOFW Length = 260 Score = 285 bits (731), Expect = 5e-76, Method: Composition-based stats. Identities = 50/214 (23%), Positives = 94/214 (43%), Gaps = 19/214 (8%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 +IV+ D +F G+K L + S DE +E Y +V++D + Sbjct: 38 RIVLIDDHKLFREGIKRILDFEQDFEVVAEGSDGDEALALVERYKPDVVIMDINMPHVNG 97 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 ++ + +P+ KV+I + ++ ++ + + + ++ + AV A G Sbjct: 98 VEATRQLIEAYPDTKVIILSIHDDESYVMHALQTGAMGYLLKEMDADALIEAVRVVAEGG 157 Query: 122 MFLPGDWRTTPEKDIKDLKS-------------------LSARQREILTMLAAGESNKEI 162 +L K+ + L + L+ R+ E+L +LA G+SNK I Sbjct: 158 SYLHPKVTHNLVKEYRRLVAGEGGGKEKQNQDVCRPYHLLTRRECEVLQLLADGKSNKGI 217 Query: 163 GRALNISTGTVKAHLESLYRRLEVKNRTQAAMML 196 AL IS TVK H+ ++ ++L V +RTQA ++ Sbjct: 218 ADALYISEKTVKNHVSNILQKLNVNDRTQAVVVA 251 >UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR family n=3 Tax=Clostridia RepID=Q2RJU9_MOOTA Length = 222 Score = 280 bits (718), Expect = 2e-74, Method: Composition-based stats. Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 9/205 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + I++ D S+ G++ L+ + A+ E + Y ++++D + G Sbjct: 7 ITILIADDHSLVREGIRKILELEPDLQVVGEAATGQEAIEMTRRYQPQVIIMDINMPGLN 66 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + ++P++ +L ++ ++ E++ V V +D + E AV A G Sbjct: 67 GIEATKVIRQEWPQIAILALTIHDDEEYIIELLRSGVSGYVLKDISAEELVQAVYQVARG 126 Query: 121 MMFLPGDWR---------TTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTG 171 + P L+AR+REIL ++ G+SN+EI R L IS Sbjct: 127 ARVIHPGVAQKVIGCIQKQKPFTPAPVSIPLTAREREILIHVSLGKSNREIARELFISEK 186 Query: 172 TVKAHLESLYRRLEVKNRTQAAMML 196 TVK HL ++ ++ V +RTQAA+ Sbjct: 187 TVKNHLTHIFHKIGVSDRTQAALYA 211 >UniRef50_A8MF72 Two component transcriptional regulator, LuxR family n=14 Tax=Clostridia RepID=A8MF72_ALKOO Length = 224 Score = 278 bits (714), Expect = 6e-74, Method: Composition-based stats. Identities = 48/208 (23%), Positives = 96/208 (46%), Gaps = 10/208 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + +++ D ++ G+K ++ I A+ +E K + +V+LD + Sbjct: 11 INVLIADDHALVRQGLKQIIELEPDIKVIGLAADGEEAVLKTQQLSPDVVLLDISMPKQN 70 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L++ +K+++ ++ +L E I+ V +D+ E+ A+ G Sbjct: 71 GIQTLRRLKDMDSTIKIIMLTFHEDREYLFETINLGANGYVLKDAESESLIKAIRDVYQG 130 Query: 121 MMFLPGDWRTTPEKDIKDLK----------SLSARQREILTMLAAGESNKEIGRALNIST 170 + ++ T K+ + L+ R+ E+LT+LA G +NKEIG L IS Sbjct: 131 LNYIYPTLATELVKEFNRREVKSQKRNNEDELTRREYEVLTLLAEGINNKEIGDCLFISE 190 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMMLNI 198 TVK H+ ++++++ V +RTQAA+ Sbjct: 191 KTVKNHVSNIFKKINVNDRTQAAIYAYK 218 >UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales RepID=D2BDI1_STRRD Length = 227 Score = 277 bits (709), Expect = 2e-73, Method: Composition-based stats. Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 6/205 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + HG++ L+Q + A +E + S +V++D G Sbjct: 19 IRVLLVDDHPLLRHGLRALLEQVGGAEVVGEAGDGEEAIALVLSLNPDVVVMDLVMPGVT 78 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + + P++ VL+ + + + V + + F AV + A G Sbjct: 79 GIEATRTLIDRRPDLGVLVLTMSEDDASVFAALRAGARGYVLKGADGNDFIAAVRAVARG 138 Query: 121 MMFLPGDWRTTPEK------DIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVK 174 + + L+ R+REIL +LA+G+SN EI R L +S TVK Sbjct: 139 EAVYGPAVARRIRRFLTTGPESGPFPELTQREREILDLLASGKSNAEIARRLFLSQKTVK 198 Query: 175 AHLESLYRRLEVKNRTQAAMMLNIS 199 HL S++ +L+V +RTQA + + Sbjct: 199 NHLTSIFAKLQVADRTQAVVRARRA 223 >UniRef50_A4J6C2 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=A4J6C2_DESRM Length = 218 Score = 273 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 85/206 (41%), Gaps = 10/206 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G++ L + + + P +V++D + Sbjct: 5 IKLLIADDHILIREGLRKILSIEPHISVVGEVTNGQQAVDYCLKNPVDIVLMDINMPIMN 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ P + ++ +L E+I + + V +D + + A G Sbjct: 65 GIEACRQIKKLNPNIGIIALTIHDQDEYLFELIKYGISGYVLKDIHPDQLIKTILGVAQG 124 Query: 121 MMFLPGDWRTTPEKDIKDLKS----------LSARQREILTMLAAGESNKEIGRALNIST 170 F+P + L S L+ R+ E+L +A G+SNK I AL IS Sbjct: 125 ESFIPPSLTARVLAEFTRLSSGDYSEKKHLNLTEREIEVLKQVAKGQSNKAIANALYISE 184 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 TVK HL ++++++ V +RTQAA+ Sbjct: 185 KTVKNHLTNIFQKIGVADRTQAALYA 210 >UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=Thermomicrobia (class) RepID=B9L2G4_THERP Length = 246 Score = 273 bits (700), Expect = 2e-72, Method: Composition-based stats. Identities = 44/204 (21%), Positives = 97/204 (47%), Gaps = 8/204 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D +F G++ ++ + A+ + + + +V++D + G Sbjct: 28 IRVLIVDDHDLFREGLRQLIETDPAIEVVGEAANGQDALKMVAELQPDVVLMDINMPGMD 87 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + V Q+ V VL+ ++ ++ I + + ++S E A++ AA G Sbjct: 88 GIRATEAIVQQYRHVHVLMLTMYDDEEYVLHAIRAGARSYLVKNSKPEELLRAIHVAAEG 147 Query: 121 MMFLPGDWRTTPEKDIKDL--------KSLSARQREILTMLAAGESNKEIGRALNISTGT 172 + D ++ + L + LS R+ +L +LA G +N++I ALN++ T Sbjct: 148 GATIDPDLAPILMREYQRLLTKAPTRGQDLSDRELTMLRLLAQGYNNRQIADALNLAEST 207 Query: 173 VKAHLESLYRRLEVKNRTQAAMML 196 VK +L +L+++L V++RTQA + Sbjct: 208 VKNNLSALFQKLGVRDRTQAVIYA 231 >UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH Length = 211 Score = 273 bits (699), Expect = 3e-72, Method: Composition-based stats. Identities = 49/198 (24%), Positives = 90/198 (45%), Gaps = 3/198 (1%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 ++++ D + G+ L+ + A E + + + LV+LD + Sbjct: 5 KVLVADDHDLVREGICKLLELYEDIKVVGEAGDGLETVKGVRDHFPDLVLLDLNMPRMGG 64 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 ++K P +KVLI + ++ EVI + +D E A++ G Sbjct: 65 ITAIKKIKEISPGIKVLILTIHDEEEYVYEVIRSGAEGYIQKDVKPEELKRAIDKVIKGD 124 Query: 122 MFLPGDWRTTPEKDIK---DLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLE 178 P + + ++ LS+R++E+L +LA G SNK+I + L IS TVK H+ Sbjct: 125 KVFPRSTENEVREVVNEKYEVCELSSREQEVLELLAQGMSNKQIAQELFISEKTVKNHVS 184 Query: 179 SLYRRLEVKNRTQAAMML 196 ++ R+L V +RTQA ++ Sbjct: 185 NILRKLSVNDRTQAVIVA 202 >UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0H3_THERP Length = 245 Score = 272 bits (696), Expect = 7e-72, Method: Composition-based stats. Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 17/213 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + I++ D +F G++ SL+Q V + A+ E + + ++++D G Sbjct: 4 INILIVDDHPLFRSGIRWSLEQNPQFVIVGEAADGSEALRLADELSPDVILVDLSLPGMN 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + + P+ V+I + L I A +D E + A G Sbjct: 64 GLEVARALKRRQPQAGVIILTMHQDDEQLFNAIRAGASAYCTKDIEPEQLIDVITRVARG 123 Query: 121 MMFLP------GDWRTTPEKDIKDL-----------KSLSARQREILTMLAAGESNKEIG 163 + + ++L L+ R+ EIL +A G SNKEI Sbjct: 124 EYLINEMVLSRPFVASRVLDQFRELSRLDRTSSGFFSPLTPREIEILDCVARGYSNKEIA 183 Query: 164 RALNISTGTVKAHLESLYRRLEVKNRTQAAMML 196 +ALNIS TVK H+ S+ R+L V +RTQA + Sbjct: 184 QALNISDQTVKNHITSILRKLAVNDRTQAVIYA 216 >UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus RepID=A0R9S0_BACAH Length = 216 Score = 270 bits (691), Expect = 2e-71, Method: Composition-based stats. Identities = 46/203 (22%), Positives = 89/203 (43%), Gaps = 7/203 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D + ++ L+ + AS D + +K+E+ +++D + G+ Sbjct: 5 IKILVVDDHAFLRDAIRSILEDESDMNVVGEASSGDGVLEKVEACRPDCILMDINLPGKN 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + +P +VL+ + +L + + + +DS+ E A+ G Sbjct: 65 GIEATELVKKNYPNCRVLVFTMYEHDEYLMDALQAGADGYLLKDSSSEQVVAAIRMLYRG 124 Query: 121 MMFLPGDWRTTP-------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 + K + L+ R++EIL L G SNKEI AL IS TV Sbjct: 125 DSVIHPRMTKKLITYHQQKMKVESNENELTEREKEILFELVKGLSNKEIAEALYISDKTV 184 Query: 174 KAHLESLYRRLEVKNRTQAAMML 196 K H+ ++++L VK+R+QA + Sbjct: 185 KIHINKIFKKLNVKSRSQAVIYA 207 >UniRef50_C8WSR5 Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSR5_ALIAD Length = 231 Score = 269 bits (690), Expect = 3e-71, Method: Composition-based stats. Identities = 46/207 (22%), Positives = 78/207 (37%), Gaps = 11/207 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D +F G+ L+ + A E + ++ + +LD Sbjct: 10 IKVLVVDDHELFRRGVVTVLRSTPGIYVVGEAGNGREAIECFQTLQPDVTLLDIHMPVCN 69 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +K P K+L+ + L E + V + + E V G Sbjct: 70 GLETARKMREANPNTKILMLTVSETEEMLFEAVKSGASGYVLKSVSPERLIECVRQVYEG 129 Query: 121 MMFLPGDWRTTPEKDIKDLK-----------SLSARQREILTMLAAGESNKEIGRALNIS 169 +P + L+ R+RE+L L+AG SNKEI RAL IS Sbjct: 130 EPVVPSSLAMKMIAEFSRTAETRMPSSESVTELTEREREVLQYLSAGASNKEIARALFIS 189 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMML 196 TV+ H+ + +L + NR QAA Sbjct: 190 ENTVRNHVRHILDKLHLSNRAQAAAYA 216 >UniRef50_B2A8K6 Two component transcriptional regulator, LuxR family n=9 Tax=Clostridia RepID=B2A8K6_NATTJ Length = 228 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 46/211 (21%), Positives = 89/211 (42%), Gaps = 15/211 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D ++F G+K L A +E+ K++ ++++D + Sbjct: 10 IRILLADDHALFRQGLKKILDMEEDLAVCGEAQNGEEVVDKVKLLKPNIILMDINMPLLN 69 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + PE KV+ ++ +L E++ + +D T A+ G Sbjct: 70 GVEATKYVKEVSPETKVIALTIHEDEEYLFEIVKEGAAGFLLKDVETPTLVQAIQEVNKG 129 Query: 121 MMFLPGDWRTTPEKDIKDLK---------------SLSARQREILTMLAAGESNKEIGRA 165 F+ + L L+ R++EIL ++A G +NKEI + Sbjct: 130 NSFIHPTITHKLLGEFNRLAQNSPRNIKSDEAVQSELTGREKEILELMAQGYTNKEISKE 189 Query: 166 LNISTGTVKAHLESLYRRLEVKNRTQAAMML 196 L IS TVK H+ ++ R+++V +RTQA + Sbjct: 190 LYISEKTVKNHVSNILRKMDVTDRTQAVITA 220 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 85/202 (42%), Gaps = 7/202 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + +++ D + G + L+ + A +E K ++++D G Sbjct: 15 ITLLLVDDHPVVRKGTRELLEGEADLRVVGEAESGEEAILKARQLMPDVILMDVSMPGMN 74 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + P V +L+ + + ++ ++ + ++++ + AV + A G Sbjct: 75 GIEATRAIKAERPGVGILVLTSYDDDAYVFALLEAGAAGYLLKNASEDELLGAVRAVAAG 134 Query: 121 MMFLPGDWRTTPEK-------DIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 L + +LS R+ E+L + A G +NKEI R L+IS TV Sbjct: 135 ESALHPAVARKVLERFSTHQTPTPPEDALSPRELEVLRVAATGRTNKEIARDLDISPRTV 194 Query: 174 KAHLESLYRRLEVKNRTQAAMM 195 + HL +++ +L V +RT+A + Sbjct: 195 QVHLANIFSKLGVGSRTEAVLY 216 >UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU8_DESAH Length = 219 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 86/207 (41%), Gaps = 11/207 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ + +I G+ L + A E + +E +V++D Sbjct: 4 IKVLVAEDHTIVRKGLCSLLYSEPDIEVVGEAENGREAIKMVEELAPDVVLMDISMPELN 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ ++P+VK+LI + + ++ E + + + S A+++A G Sbjct: 64 GMDATRQLKKKYPDVKILILSMHSTEEYIFETLRAGASGYLIKRSAPTDLIKAIHAAHAG 123 Query: 121 MMFLPGDWRTTPEK-----------DIKDLKSLSARQREILTMLAAGESNKEIGRALNIS 169 FL K + + L LSAR+RE+L ++A G +N+EI L IS Sbjct: 124 DCFLSPSISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANREIAGHLYIS 183 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMML 196 TV+AH + ++L + + Sbjct: 184 PKTVEAHRNHIQKKLGLNGTAELTKYA 210 >UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax=Bacillales RepID=DEGU_BREBE Length = 236 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 45/216 (20%), Positives = 93/216 (43%), Gaps = 22/216 (10%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +QIV+ D +F G+K L + + + +E Y ++++D + Sbjct: 10 IQIVIIDDHQLFREGVKRILAMEPEFEVVADGEDGENAVELVEKYNPDVILMDINMPKVN 69 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + ++P+VKVL+ + ++ ++ V+ + ++ + AV A G Sbjct: 70 GVEATRDLIQRYPDVKVLVLSIHDDESYVTHVLKTGASGYLLKEMDADALIEAVKVVAQG 129 Query: 121 MMFLPGDWRTTPEKDIKDLKS----------------------LSARQREILTMLAAGES 158 ++ K+ + L + L+ R+ E+L ++ G S Sbjct: 130 GAYIHPKVTHNLIKEYRRLVNEDEQESSEIGFKEVEYRKPLHILTRRECEVLQLMTDGYS 189 Query: 159 NKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAM 194 N+ IG AL IS TVK H+ ++ +++ V +RTQA + Sbjct: 190 NRMIGEALYISEKTVKNHVSNILQKMNVNDRTQAVV 225 >UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteria RepID=C1F9F6_ACIC5 Length = 213 Score = 268 bits (688), Expect = 5e-71, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 76/199 (38%), Gaps = 1/199 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D I G+ L I A E + + ++D Sbjct: 10 IRILVVDDHHIVRQGLVALLNTLPGFEVIAEAGDGVEAIALHREHQPDITIMDLRLPRMN 69 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + + P ++++ T + + + + + A+ S G Sbjct: 70 GVEAITRIREESPGARIVVLTTFDGDEDIYRALQAGARGYLLKGMDADDLTAAIRSVHAG 129 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 +P + + L+AR+ ++L ++ G SN+EI L+IS TVK H+ +L Sbjct: 130 KSRIPTVVAERLAERMSG-SELTARELDVLRLIVQGRSNREIAADLHISEATVKTHINNL 188 Query: 181 YRRLEVKNRTQAAMMLNIS 199 +L V +RTQAA Sbjct: 189 LSKLGVSDRTQAATTALQR 207 >UniRef50_B0C955 Two-component transcriptional regulator, LuxR family n=4 Tax=Cyanobacteria RepID=B0C955_ACAM1 Length = 215 Score = 268 bits (688), Expect = 6e-71, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 89/207 (42%), Gaps = 9/207 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D Q++F G+ L+ + A + ++ ++++D Sbjct: 2 IRLLLADDQALFRQGLASLLELEEDLSVVGQAQDGRDAILLTQTLQPDVILMDVRMPICD 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ +FP +++L+ T ++ + L + + + A A+ G Sbjct: 62 GVEATREIHQRFPWIRILVLTTFDEDEYIWTSLQAGALGYLLKSTPASQLAAAIRMLHDG 121 Query: 121 MMFLPGDWRTTPEKDIKD---------LKSLSARQREILTMLAAGESNKEIGRALNISTG 171 L ++ L+ LS R+ ++L ++ G+SN+EI + L+++ G Sbjct: 122 HFQLGPTIAPKVIAQLRPPPLKNEQNHLERLSDRELDVLNLIGQGKSNREISQILHLTEG 181 Query: 172 TVKAHLESLYRRLEVKNRTQAAMMLNI 198 TVK ++ L L V++RTQAA+ Sbjct: 182 TVKNYVSQLLGSLGVRDRTQAALWAQQ 208 >UniRef50_B2J2N1 Two component transcriptional regulator, LuxR family n=12 Tax=Cyanobacteria RepID=B2J2N1_NOSP7 Length = 232 Score = 268 bits (687), Expect = 7e-71, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 86/209 (41%), Gaps = 12/209 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D QS+ G+K L+Q + A + + +V++D Sbjct: 9 IRLLIVDDQSLIRQGLKAMLEQEPDLEVVGDAENGKVALELVAELQPDVVLMDIRMPEMD 68 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + FP +KVL+ +T + +L + + +D A A+ G Sbjct: 69 GRTATKLIMQSFPNIKVLVLSTFDDDSYLTGAMRAGAKGYLLKDMPSSELADAIRFGHSG 128 Query: 121 MMFLPGDW------------RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNI 168 ++AR++E+L ++ G +N+EI + L I Sbjct: 129 YTQFGPGLFDKLLVTEAASASANQNSASSKPSEITAREQEVLCLIGVGATNREIAQQLYI 188 Query: 169 STGTVKAHLESLYRRLEVKNRTQAAMMLN 197 + GTVK H+ S+ RL +KNR+Q A+ N Sbjct: 189 TEGTVKTHVTSILSRLNLKNRSQLAIYAN 217 >UniRef50_A0LVS2 Two component transcriptional regulator, LuxR family n=35 Tax=Actinomycetales RepID=A0LVS2_ACIC1 Length = 303 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 87/208 (41%), Gaps = 12/208 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D ++F G+++ L+Q + AS E + +V+LD Sbjct: 87 IKVLVADDHALFRRGLEMVLRQEPDIQLVAEASDGAEAVARAAETLPDVVLLDVRMPKRT 146 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 P K+++ + L E I + + ++ +++ A A+ + G Sbjct: 147 GIEACAAIKEVCPSAKIIMLTISDEEADLYEAIKAGAMGYLLKEISIDEVAAAIRAVHGG 206 Query: 121 MMFLPGDWRTTPEKDIKDL------------KSLSARQREILTMLAAGESNKEIGRALNI 168 + + + L L+ R+ E+L ++A G +N++I + L I Sbjct: 207 QSLISPSMASKLLNEFASLIKRGDARHQVPAPKLTEREMEVLRLVAKGLNNRDIAKQLFI 266 Query: 169 STGTVKAHLESLYRRLEVKNRTQAAMML 196 S TVK H+ ++ +L++ +R +A + Sbjct: 267 SENTVKNHVRNILEKLQLHSRMEAVVYA 294 >UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillaceae RepID=A0RDP4_BACAH Length = 221 Score = 267 bits (685), Expect = 1e-70, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 81/201 (40%), Gaps = 5/201 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ + I G+ L+ R + A ++ + + +V++D Sbjct: 15 IKLLLVEDHHIVRRGLVFFLKTREEFEIVGEAENGEDALTFVRTERPDVVLMDLSMPKMD 74 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ +K+LI ++ + ++ + ++ E ++ + G Sbjct: 75 GIEATKQIKQYDETIKILILSSFSEQDYVLPALEAGADGYQLKEVQPEQLVASIIAIYEG 134 Query: 121 MMFLPGDWRTTPEKDIK-----DLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKA 175 L+ R++E+L +A G SNKEI L+I+ TVK Sbjct: 135 NANFHPKVTPALLGRSAVKKENPFSMLTKREQEVLQEIAKGRSNKEIAAELHITEQTVKT 194 Query: 176 HLESLYRRLEVKNRTQAAMML 196 H+ ++ +LEV +RTQAA+ Sbjct: 195 HVSNILAKLEVDDRTQAALYA 215 >UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=Q1AVR6_RUBXD Length = 220 Score = 267 bits (685), Expect = 1e-70, Method: Composition-based stats. Identities = 50/210 (23%), Positives = 95/210 (45%), Gaps = 11/210 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ + Q++ G++ L + A+ E ++L +V++D Sbjct: 5 VRVMIVEDQALMREGLRTLLDLEEGVEVVGEAADGVEALERLPGARPEVVLVDVRMPRMD 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L+++ + PEV +I T + ++ + + +D+ E A A+ G Sbjct: 65 GIQLIERLGREHPEVAAIILTTFDDDEYVFRGLRAGARGYILKDTPSEELAAAIEKVHRG 124 Query: 121 MMFLPGDWRTTPEKDIKDLK-----------SLSARQREILTMLAAGESNKEIGRALNIS 169 L G ++ L LS R+ E+L ++A+G SN+EI RAL I+ Sbjct: 125 EAVLDGPITLKVISELGRLSKGPAGPQPGSGGLSEREMEVLRLVASGASNREIARALYIT 184 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 GTVK H+ S+ R+L ++RTQAA+ Sbjct: 185 EGTVKNHISSILRKLGFRDRTQAALYALER 214 >UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=Bacteria RepID=B4VFW8_9ACTO Length = 216 Score = 267 bits (685), Expect = 1e-70, Method: Composition-based stats. Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 6/202 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G++ L+ + + AS +E + E ++++D G Sbjct: 8 VRVLLVDDHQVVRRGLRTFLEVQEDIEVVGEASDGEEGIARAEELRPDVILMDIKMPGTD 67 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L++ +VLI + +R + + V +D + A A+ S G Sbjct: 68 GIEALRRLRELANPARVLIVTSFTEQRTVVPALRAGAAGYVYKDIDPDALAGAIRSVHAG 127 Query: 121 MMFLPGDWRTTPE------KDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVK 174 + L + +L+ R+RE+L+ +A G SN+EI RAL +S TVK Sbjct: 128 HVLLQPEVAVALLTQDDQGPSSSRGGALTDREREVLSHIADGRSNREIARALVLSEKTVK 187 Query: 175 AHLESLYRRLEVKNRTQAAMML 196 H+ ++ +L+V +RTQAA+ Sbjct: 188 THVSNILMKLDVADRTQAALWA 209 >UniRef50_B5JFN7 Response regulator receiver domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFN7_9BACT Length = 220 Score = 267 bits (683), Expect = 2e-70, Method: Composition-based stats. Identities = 49/212 (23%), Positives = 90/212 (42%), Gaps = 14/212 (6%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +QIV+ D Q++F+ G+K L + E + +V++D + Sbjct: 5 IQIVLADDQALFLEGLKTLLSLDDSLEIVGECHNGQEALEACRRLRPQIVLMDLNMPVMD 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + PEV VL T + + E + + +D+ + A+ + + G Sbjct: 65 GVAATKAIKQELPEVNVLTLTTFDDDERVFEALKAGSSGYLLKDTPSKQLVEAIRAVSSG 124 Query: 121 MMFLPGDWRTTPEKDIKDL--------------KSLSARQREILTMLAAGESNKEIGRAL 166 FL + + + + LS R+ ++L L+ G SNKEI L Sbjct: 125 ESFLQPSIASKVLAEFSRMSGPAAVKKAPVQLREPLSQREEQVLVWLSRGCSNKEIASHL 184 Query: 167 NISTGTVKAHLESLYRRLEVKNRTQAAMMLNI 198 +++ GTVK H+ ++ +L V +RTQAA+M Sbjct: 185 DLAEGTVKNHVSNVLGKLGVLDRTQAALMARD 216 >UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Actinobacteria (class) RepID=D2AX12_STRRD Length = 239 Score = 266 bits (681), Expect = 4e-70, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 83/210 (39%), Gaps = 11/210 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D Q + G+ + L + A + +V++D Sbjct: 11 IRVLIVDDQPLVRRGLSLILSPDPSFEVVGEAENGAQAVTLARRLRPDVVVMDIRMPVLD 70 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ P+ +VL +T ++ + +P+DS+ E + A+ + G Sbjct: 71 GVGATRELAATVPDCRVLALSTFDLDEYVVGALRAGAYGFLPKDSSPEDLSAAIRTVHAG 130 Query: 121 MMFLPGDWRTTP-----------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIS 169 + T L L+ R+ E+ ++A G N I R L+IS Sbjct: 131 EAAVAPRLLTRLISTYVRAPHGTRPTPTGLGELTPREVEVWRLMATGLDNTGISRTLDIS 190 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 TVK ++ S++ +L V++R QA ++ S Sbjct: 191 LSTVKNYITSIFDKLAVRDRAQAVIVAYES 220 >UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteria RepID=Q8YV43_ANASP Length = 209 Score = 266 bits (681), Expect = 4e-70, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 86/199 (43%), Gaps = 1/199 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D +IF G+ + + + A +++ E + + ++D Sbjct: 7 IRVLIADDHAIFRQGLATIINRDPEMQVVAQAENGEQVIALFEEHQPDVTLMDLRMPEVE 66 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + ++++ T + + + + +++ + A+ + G Sbjct: 67 GVAAISAICATAKSARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVHRG 126 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 ++P D + + + LS R+ E+L LA G SN +I AL+I GTVK+H+ + Sbjct: 127 HKYIPPDVGAKLVQRLSN-PELSERELEVLRSLAQGMSNADIADALSIGEGTVKSHVNRI 185 Query: 181 YRRLEVKNRTQAAMMLNIS 199 +L+V +RTQA ++ Sbjct: 186 LNKLDVSDRTQAVIVAVKR 204 >UniRef50_D1AAU8 Two component transcriptional regulator, LuxR family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AAU8_THECD Length = 220 Score = 265 bits (680), Expect = 5e-70, Method: Composition-based stats. Identities = 41/207 (19%), Positives = 84/207 (40%), Gaps = 9/207 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D +F G++ L+ + A + Q +V++D G Sbjct: 10 IRVLITDDHPVFRQGLRGLLEAL-GVEVVGEAESGPQAVQLAAELQPDVVVMDLHMPGGN 68 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + P + VL+ + + + + ++S E A AV + A G Sbjct: 69 GIEATRTITRTSPRIGVLVLTMFRDDDSVFAAMRAGARGYLLKESGAEEIARAVRAVAAG 128 Query: 121 MMFLPGDWRTT--------PEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 + P+ L+ R+RE+L ++A G SN EI + L +S T Sbjct: 129 EAIYGPEIARRVLTYFADMPDPKQTAFPELTEREREVLQLIAQGRSNGEIAQTLFLSPKT 188 Query: 173 VKAHLESLYRRLEVKNRTQAAMMLNIS 199 V+ H+ +++ +L V +R QA ++ + Sbjct: 189 VRNHVSNIFMKLHVADRAQAIVLAREA 215 >UniRef50_O07528 Uncharacterized transcriptional regulatory protein yhcZ n=3 Tax=Bacillus RepID=YHCZ_BACSU Length = 214 Score = 265 bits (678), Expect = 9e-70, Method: Composition-based stats. Identities = 48/204 (23%), Positives = 89/204 (43%), Gaps = 9/204 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 M+IV+ D + G++ + + A+ E + +E LV++D Sbjct: 1 MKIVIADDHHVVRKGLRFFFATQDDIEVVGEAATGLEALRVIEETKPDLVLMDLSMPEMD 60 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++K + QFP+ +++ + ++ + + A +D+ E G Sbjct: 61 GIQAIKKAIQQFPDTNIIVLTSYSDQEHVIPALQAGAKAYQLKDTEPEELVKT-RQVHGG 119 Query: 121 MMFLPGDWRTTP--------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 L + + + L+ R++++LT +A G+SNKEI AL IS T Sbjct: 120 EYKLSTAIMPHVLTHMKNQHDPEKEKYYQLTRREKDVLTEIANGKSNKEIAAALFISEKT 179 Query: 173 VKAHLESLYRRLEVKNRTQAAMML 196 VK H+ +L +LEV +RTQAA+ Sbjct: 180 VKTHVSNLLAKLEVADRTQAALFA 203 >UniRef50_C6D0G6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=C6D0G6_PAESJ Length = 225 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 47/212 (22%), Positives = 90/212 (42%), Gaps = 16/212 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D I + G+ L + + A E +K +V++D + Sbjct: 3 IKILLADDHQIVLKGISFFLAMQPDFELVGEAHNGKEAVEKAGELQPDIVLMDLNMPIMD 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 Q P +KVL+ + ++ + + + + +D + A A+ SA G Sbjct: 63 GIEASALIKEQHPHIKVLVLTSFADQSHIVPALQTGAIGYMLKDVEPDQLAEAIRSAYKG 122 Query: 121 MMFLPGDWRTTPEK----------------DIKDLKSLSARQREILTMLAAGESNKEIGR 164 + L D K L++L+ R+ E+L +L G SNK+I + Sbjct: 123 NIQLHPDISRALLSRPEPEPRPEPVIQHSNRDKSLEALTPRELEVLELLTKGLSNKDIAQ 182 Query: 165 ALNISTGTVKAHLESLYRRLEVKNRTQAAMML 196 L ++ TVK H+ S+ +L++ +RTQAA+ Sbjct: 183 TLIVAEKTVKTHVSSILSKLDLSDRTQAALFA 214 >UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridium RepID=C5RGJ7_CLOCL Length = 220 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 47/216 (21%), Positives = 93/216 (43%), Gaps = 17/216 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + +++ D Q I G+K+ L I A +EL L+++ ++++D Sbjct: 2 INVIIADDQKIVREGIKMILSLYDEINVIGEAENGEELINLLQNFMADVILMDVRMPIID 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + ++ KV+I T ++ + I + +D E A+ S G Sbjct: 62 GVEATKIIKERYIHTKVIILTTFNEDEYIFKAIKNGADGYLLKDVGSEFIINAIRSVYNG 121 Query: 121 MMFLPGDWRTTPEKDIKD-----------------LKSLSARQREILTMLAAGESNKEIG 163 M L + K L SL+ R+ ++ ++A G+SNK+I Sbjct: 122 AMLLDPEVTVKVVKAFNSITNESKNSNEFDNINNKLNSLTPREIDVAKLVAQGKSNKDIC 181 Query: 164 RALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 R+L ++ GTVK ++ + +LE+ +RT+ A+ +N + Sbjct: 182 RSLFLTEGTVKNYVTRILGKLELNSRTELAVFINQA 217 >UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Tax=Firmicutes RepID=LIAR_BACSU Length = 211 Score = 263 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 45/205 (21%), Positives = 94/205 (45%), Gaps = 7/205 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G+ L+ + I AS E + ++++D +G Sbjct: 2 IRVLLIDDHEMVRMGLAAFLEAQPDIEVIGEASDGSEGVRLAVELSPDVILMDLVMEGMD 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ + + K+++ + + + VI L+ + + S A A+ +A+ G Sbjct: 62 GIEATKQICRELSDPKIIVLTSFIDDDKVYPVIEAGALSYLLKTSKAAEIADAIRAASKG 121 Query: 121 MMFLPGDWRTTPEKDIK-------DLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 L ++ +SL+ R+ EIL ++A G++NKEIG L I+ TV Sbjct: 122 EPKLESKVAGKVLSRLRHSGENALPHESLTKRELEILCLIAEGKTNKEIGEELFITIKTV 181 Query: 174 KAHLESLYRRLEVKNRTQAAMMLNI 198 K H+ ++ +L+V +RTQAA+ + Sbjct: 182 KTHITNILSKLDVSDRTQAAVYAHR 206 >UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus RepID=A9WA66_CHLAA Length = 218 Score = 263 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 46/213 (21%), Positives = 89/213 (41%), Gaps = 15/213 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D Q++ G+ L ++ + A E + + S +V++D Sbjct: 3 IRVLIVDDQALIRTGIATLLSRKADIEVVGQAGNGREALELVASLDPDVVLMDVMMPVMD 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +K + P V++ T + + + I + +D A ++ + A G Sbjct: 63 GVEATRKLAERGPRPAVIMLTTFHDDERVLQSIAAGARGYLLKDVDHRVLADSIRTVAGG 122 Query: 121 MMFLPGDWRTTPEKDIKDLKS---------------LSARQREILTMLAAGESNKEIGRA 165 + + L L+ R+R+IL +LA G +N+EIG Sbjct: 123 GALIHPQIIAQLLPRLASLAPTPVTASSSPSDVTSILTPRERDILRLLAQGYTNQEIGEQ 182 Query: 166 LNISTGTVKAHLESLYRRLEVKNRTQAAMMLNI 198 L +S GTVK HL ++ +L V++RTQAA+ Sbjct: 183 LALSVGTVKNHLSVIFAKLAVRDRTQAALWARE 215 >UniRef50_C7MUJ2 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=101 Tax=Bacteria RepID=C7MUJ2_SACVD Length = 239 Score = 263 bits (674), Expect = 2e-69, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 82/211 (38%), Gaps = 14/211 (6%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++V+ D Q + G ++ L + A E + +V++D Sbjct: 21 LRVVLADDQDLVRAGFRVILSSDDGIEVVGEAGDGWEAVEVATRERADVVLMDVQMPKLD 80 Query: 61 CYWLLQKTV----VQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS 116 ++ + P KV+I T + +L E + + ++++ E +V Sbjct: 81 GLEATRRLLGPAGADHP-TKVIILTTFDREDYLFEALRAGASGFLLKNASPEDLIESVRI 139 Query: 117 AAMGMMFLPGDWRTTPEK---------DIKDLKSLSARQREILTMLAAGESNKEIGRALN 167 A G L + + L+ R+ E+L++LA G SN EI R L Sbjct: 140 VARGDALLSPEVTRRVIARFSAPAVTGPTRRPSELTDREFEVLSLLAKGASNAEIARQLV 199 Query: 168 ISTGTVKAHLESLYRRLEVKNRTQAAMMLNI 198 + TVK H+ + +L +++RT A + Sbjct: 200 LGETTVKTHVSRILTKLNLRDRTHAVVFAYE 230 >UniRef50_B0C756 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C756_ACAM1 Length = 224 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 44/207 (21%), Positives = 92/207 (44%), Gaps = 8/207 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + I +G+K Q + A + ++ ++++D + Sbjct: 8 IRVLLVDDEDIVRYGLKAIAQGTPEIEIVGEAGSGKAAIAQAKTLQPDVILMDINMPQMD 67 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 Q+ P KVLI T +L E + + + +++ E F ++ A G Sbjct: 68 GVTATQEISRIQPHAKVLILTTHDEAEYLVEAMQQGAVGYLLKNTPPEDFIQSIQQAHKG 127 Query: 121 MMFLPGDWRTTP--------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 + L I+ + ++ R++++L ++A G SN+EI L+I+ T Sbjct: 128 YLQLGPGLGQKLCQLLKTPVRPQIEAFEGITPREQDVLKLVATGASNREISETLHITEKT 187 Query: 173 VKAHLESLYRRLEVKNRTQAAMMLNIS 199 VK H+ S+ R+ V++RTQ A+ N + Sbjct: 188 VKNHVSSILSRVGVQSRTQLAIWANSA 214 >UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=Proteobacteria RepID=Q09C30_STIAU Length = 213 Score = 263 bits (673), Expect = 3e-69, Method: Composition-based stats. Identities = 44/208 (21%), Positives = 89/208 (42%), Gaps = 10/208 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + IV+ D ++ G++ L+ + AS +E +++ +V++D Sbjct: 2 INIVLVDDHALIREGIRSLLEFTPDLHVVGEASDGEEAVKRVRELSPDVVLMDVRMPRMT 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L+ + PE +V++ T + E + V + +D T + A A+ A G Sbjct: 62 GLEALRAMRREAPERRVVLLTTFDEDSVVVEALRAGVKGFLLKDVTRDQLADAIRRVANG 121 Query: 121 MMFLPGDWRTTPEKDIKDLKS----------LSARQREILTMLAAGESNKEIGRALNIST 170 LP ++ ++ L+ R+ E++ ++A G SN+EI L + Sbjct: 122 ETLLPPGVAERVQRGFTEVPQEFPHAELPEGLTRRELEVMRLIARGLSNREIATVLGTAE 181 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMMLNI 198 GTVK ++ +L V++RT+A + Sbjct: 182 GTVKNQTSNILAKLGVRDRTRAVLRAME 209 >UniRef50_B2J8J5 Two component transcriptional regulator, LuxR family n=3 Tax=Cyanobacteria RepID=B2J8J5_NOSP7 Length = 211 Score = 262 bits (672), Expect = 4e-69, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 80/196 (40%), Gaps = 1/196 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D I + + LQ I A E + + + ++D Sbjct: 9 IRILLADDHPILGQALTMFLQCESDMTVIGHAGDGREALELFHQHQPDVALMDLRMPKME 68 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + +F ++++ T + + + + + A+ + G Sbjct: 69 GADAIAAICAKFKHARIVVLTTFDGDEDIYRGLRAGAKGYLLKGAEPNELLDAIRTVHKG 128 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 ++P + + + LS R+ E+L ++A G++N++I LNI+ TV+ H ++ Sbjct: 129 QKYIPPTIAAKLAERMSS-EELSDRELEVLRLIAKGKNNQQISNVLNIAESTVRFHTNNI 187 Query: 181 YRRLEVKNRTQAAMML 196 + +L V +RTQA + Sbjct: 188 FGKLNVSDRTQALVTA 203 >UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacillus RepID=C3BET8_9BACI Length = 216 Score = 262 bits (672), Expect = 4e-69, Method: Composition-based stats. Identities = 49/207 (23%), Positives = 93/207 (44%), Gaps = 14/207 (6%) Query: 4 VMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCYW 63 ++ D QS+ G+ + L R + A+ DE+ + E ++++D Sbjct: 1 MIVDDQSLIRDGLAMLLNLRSELEVVGTANDGDEVVRIAEQLQPEIILMDIRMPRINGVE 60 Query: 64 LLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMF 123 + +FP++KVL+ T + + E + + +D + A+ + G Sbjct: 61 GTRLIRERFPDMKVLMLTTFNDSELIFEALEQGASGYLLKDMETDAIVQAILTVHAGGAV 120 Query: 124 LPGDWRTTPEKDIKD--------------LKSLSARQREILTMLAAGESNKEIGRALNIS 169 LP D K++K ++ L+ R+ ++L + G +NKEI L I+ Sbjct: 121 LPQDITAQIVKELKRTKVVEISGQNQPKQVEQLTEREIDVLREIGLGLNNKEIAEKLFIT 180 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMML 196 GTVK H+ +L +LE+++RTQAA+ Sbjct: 181 EGTVKNHVSNLISKLELRDRTQAAIYA 207 >UniRef50_D1C1C8 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1C1C8_SPHTD Length = 237 Score = 262 bits (670), Expect = 7e-69, Method: Composition-based stats. Identities = 43/205 (20%), Positives = 84/205 (40%), Gaps = 9/205 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + +++ D +F ++ L+ I A Q E + ++++D G Sbjct: 23 ISVLLVDDHVLFRQALRHLLEAEPDIRVIGEAGDGRSAQQLAERFHPDVILMDISMPGVD 82 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + P K++I + I A + ++S A+ + A G Sbjct: 83 GVTATRDLKAGIPNTKIIILTMFAEDGHVIRAIRAGADAYLLKNSESSKVIDAIRAVARG 142 Query: 121 MMFLPGDWRTTPEKDIKDLKS---------LSARQREILTMLAAGESNKEIGRALNISTG 171 + T + + + L+ R+ ++L ++A+G SNKEI L+++ Sbjct: 143 ESVIEPQLATKLLNEFRRISEFREEETVAGLTEREIQLLRLVASGMSNKEIAAELSLAES 202 Query: 172 TVKAHLESLYRRLEVKNRTQAAMML 196 TVK L L+ +L+VK+RTQAA+ Sbjct: 203 TVKNRLSLLFEKLDVKDRTQAAIYA 227 >UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR family n=4 Tax=Bacteria RepID=D1C9Z8_SPHTD Length = 212 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 84/206 (40%), Gaps = 7/206 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D + G+ L+ + + A D+ Q+ +V++D G Sbjct: 2 IRILVVDDHPVVREGLVAILEAQEDLTVVGEAGDGDQAVQQYRDLKPDVVLMDLAMPGTD 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +Q+ P +V++ + + + + + + E AV G Sbjct: 62 GVQAIQEIKRIDPNARVVVLTAYDTDERILQAVQAGASGYLLKGAPREDIFRAVRVVYRG 121 Query: 121 MMFLPGDWRTTPEKDIKDL-------KSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 L + DL + L+AR+ ++LT++A G NKEI L+I+ TV Sbjct: 122 GSLLEPVVAGKLLNRMGDLLRGEPVEEELTARELDVLTLMARGLRNKEIAYELSITERTV 181 Query: 174 KAHLESLYRRLEVKNRTQAAMMLNIS 199 K H ++YR+L+V RT+A Sbjct: 182 KFHANAIYRKLDVSGRTEAVSKAIQR 207 >UniRef50_A5V148 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=A5V148_ROSS1 Length = 216 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 39/206 (18%), Positives = 92/206 (44%), Gaps = 8/206 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + I++ + Q++ G++ L + A E ++ ++++D Sbjct: 6 ISILIVEDQTLMRQGLRTILDLEESIRVVGEARDGAEGVREALRLRPDIILMDVQMPVMN 65 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ + + + ++++ T ++ + + + + +D+ E + G Sbjct: 66 GVEAIRAIIAAWSQARIIVLTTFDRDDYVFQSVRAGAMGYLLKDAPAEALLQTIRRVHAG 125 Query: 121 MMFLPGDWRTTPEKDIKDLKS--------LSARQREILTMLAAGESNKEIGRALNISTGT 172 +F+ + + ++ + LS R+RE+L +LA G SN+EI L+I+ GT Sbjct: 126 EVFIQPEIASRTLREAATGRRRAGTIPFDLSEREREVLVLLAQGLSNREIAGRLSITEGT 185 Query: 173 VKAHLESLYRRLEVKNRTQAAMMLNI 198 VK H+ ++ +L+ +NRTQAA + Sbjct: 186 VKNHVSNILAKLQAENRTQAANIARR 211 >UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7D2_9BACL Length = 227 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 45/208 (21%), Positives = 96/208 (46%), Gaps = 10/208 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESY----PEALVMLDGDQ 56 +++++ D + G+K L Q I A E + LE ++++D Sbjct: 13 IKVMIVDDHDMVRMGLKTYLMQDPGFEVIAEAGDGREAVELLERGLREGQPDIILMDLMM 72 Query: 57 DGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS 116 G ++ +FP++K++I + + + + ++ V + + E A+ Sbjct: 73 PGMNGAEATKEVRSRFPDMKIVILTSFLEDDLVVQAVEAGAVSYVLKTVSAEELIYALQG 132 Query: 117 AAMGMMFLPGDWRTTPEKDIKDL------KSLSARQREILTMLAAGESNKEIGRALNIST 170 A GM + G+ + ++ ++ R++E+L ++A G+SNK+I L+IS Sbjct: 133 AYRGMPVMTGEVAQALTRGLRQRTVQGDDSGMTEREKEVLLLIAEGKSNKDIAEELHISI 192 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMMLNI 198 TVK H+ +L + E+++RTQ A+ + Sbjct: 193 KTVKTHVSNLLMKCELEDRTQLAIYAHR 220 >UniRef50_C6BTX3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTX3_DESAD Length = 217 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 78/205 (38%), Gaps = 9/205 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D I G++ L + A+ E + ++++D Sbjct: 5 IKVLLVDDHDIVRIGVRSFLGSFDDIKVVGEAANGQEAVEMTAELSPDIILMDMLMPVMD 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +++ + +++ + L I + + +DST + A+ G Sbjct: 65 GIQAIREIRDRKLPGRIIALTSFATDDKLFPAIKAGAMGYLLKDSTPDELLEAIRRVHRG 124 Query: 121 MMFLPGDWRTTP---------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTG 171 L D + + L+ R+ + L ++A G+SNK I + +S Sbjct: 125 EPSLAPDIARKVLSELSQPGEDSETPTPDPLTPRELDTLKLVAKGKSNKAIAEEMFVSEA 184 Query: 172 TVKAHLESLYRRLEVKNRTQAAMML 196 TV+ H+ S+ +L + NR +A + Sbjct: 185 TVRTHMTSILSKLHLANRVEATLYA 209 >UniRef50_D1XHI5 Two component transcriptional regulator, LuxR family n=4 Tax=Streptomyces RepID=D1XHI5_9ACTO Length = 222 Score = 260 bits (667), Expect = 1e-68, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 83/210 (39%), Gaps = 14/210 (6%) Query: 4 VMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCYW 63 V+ D Q+I G+ + L + A DE + +V++D Sbjct: 2 VVADDQAIVREGIVMLLGLLPGIEVVGAAKDGDEAVALVAEKAPDVVLMDLRMPRCDGVE 61 Query: 64 LLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMF 123 ++ + P +V++ T + L + + +D+ E A+++ G Sbjct: 62 ATRRIRKEHPRTQVVVLTTFADDDSLFTALQAGARGYLTKDARGEEIVQAIDAVMSGEAG 121 Query: 124 LPGDWRTTPEK--------------DIKDLKSLSARQREILTMLAAGESNKEIGRALNIS 169 L + + + L+ R+ E+L ++A G SN+EI RAL++S Sbjct: 122 LSPKVQRRLLERVTGSETVPAPCALPSELPDGLTPREAEVLVLIAEGLSNREIARALHVS 181 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 TVK H+ +L+ + ++RTQA Sbjct: 182 AATVKTHINNLFAKTGARDRTQAVRYAYGR 211 >UniRef50_Q1AST2 Two component transcriptional regulator, LuxR family n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AST2_RUBXD Length = 232 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 47/206 (22%), Positives = 90/206 (43%), Gaps = 10/206 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G ++ L+Q + AS E + +V++D G Sbjct: 11 VRLIVVDDHDLIRAGFRLVLEQEPDFEVVGEASSGREAIELCRRLRPDVVVMDLAMPGVD 70 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ + P+V VL+ + ++ E + V + S + A+ G Sbjct: 71 GLEATRRIKEEHPQVAVLVVTALEDPEYMLEALKAGAAGYVLKSSPLPRVISALRRLLSG 130 Query: 121 MMFLPGDWRTTPEKDIKDL----------KSLSARQREILTMLAAGESNKEIGRALNIST 170 L + +D+ + L+AR+RE+L ++A G +N EI R L IS Sbjct: 131 ESPLNQELAARLIQDLARRPGGGGNPPPAEELTAREREVLVLMARGRTNPEIARELVISR 190 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 GT K+H++++ R+L V +RTQA Sbjct: 191 GTAKSHVQNIIRKLGVSDRTQAVARA 216 >UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q1ASU8_RUBXD Length = 207 Score = 259 bits (664), Expect = 3e-68, Method: Composition-based stats. Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 2/200 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D + G+ L R + A +E+ + +V+LD + G Sbjct: 4 IRILVADDHPMLREGLSAVLGTRPGFEVVGEAGDGEEVLRLASGLRPDVVLLDLEMPGTG 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +L++ KV++ ++R L E + + + ++ AV + G Sbjct: 64 GVEVLRRLRGLDDPPKVVVFTAYDDER-LLEALREGARGCLLKGASRTEIFDAVRTVHAG 122 Query: 121 MMFLPGDWRTTPEKDIK-DLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLES 179 +P + K+++ + + L+ R+ E+L ++A G +N+E+ RAL IS TVK H+ S Sbjct: 123 GSVIPPEITARVLKEMRGESEPLTPRELEVLRLVARGLTNREVARALFISERTVKFHVSS 182 Query: 180 LYRRLEVKNRTQAAMMLNIS 199 L +L +NRTQA + Sbjct: 183 LLAKLRAENRTQAVAIARER 202 >UniRef50_A7NP18 Two component transcriptional regulator, LuxR family n=12 Tax=Bacteria RepID=A7NP18_ROSCS Length = 222 Score = 259 bits (664), Expect = 3e-68, Method: Composition-based stats. Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 6/205 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D +F G++ L+++ + + AS E+ + + +V+LD Sbjct: 6 IRILLADDHRMFRQGLRELLERKGGFIIVGEASTGREVLAQAAALRPDIVLLDIQMPEID 65 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + ++ P+VKV++ + L E I A + +D+ + + G Sbjct: 66 GVAVARQLAQTHPDVKVIMLTMYRQDQHLFEAIKAGARAYLLKDADADELIDVIERVHRG 125 Query: 121 MMFLPGDWRTTPEKDIKDL------KSLSARQREILTMLAAGESNKEIGRALNISTGTVK 174 L + + L + L+ R+R+ILT+LA G N+ I + L +S TV Sbjct: 126 EAALDPTVTLRVFDEFRRLSIDQDAEQLTERERDILTLLAEGHDNRTIAQRLFLSEKTVG 185 Query: 175 AHLESLYRRLEVKNRTQAAMMLNIS 199 L ++++L V NRTQAA++ Sbjct: 186 NRLSEIFQKLGVSNRTQAALVAVQR 210 >UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXM6_EIKCO Length = 215 Score = 259 bits (664), Expect = 3e-68, Method: Composition-based stats. Identities = 46/202 (22%), Positives = 93/202 (46%), Gaps = 4/202 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D +F G+ L Q + A+ E + + LV+LD + Sbjct: 6 IRILLVDDHPLFRRGLSFLLAQEYGFEIVAEATDGLEGVKLARFHRPDLVLLDVEMPVMN 65 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L + + P + VL+ + L++ + + +++ + A+ A G Sbjct: 66 GPEALAQMLDFQPGLPVLMLTISEDADNLKKCLELGARGYILKNADTDFLVEAIRQAVAG 125 Query: 121 MMFLPGDW----RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAH 176 + + ++ P + L SL+ R+R++L +A G SNK I R + +S TVKAH Sbjct: 126 QQTVSPEMNNAGQSIPPEHSAILDSLTQRERDVLRYVAGGISNKMIARRMFLSENTVKAH 185 Query: 177 LESLYRRLEVKNRTQAAMMLNI 198 +++++R+L + NR +AA+ Sbjct: 186 MQNIFRKLNIDNRVRAAVYARE 207 >UniRef50_A3Y699 Putative two component system response regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3Y699_9GAMM Length = 226 Score = 258 bits (662), Expect = 6e-68, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 83/210 (39%), Gaps = 12/210 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++IV+ D Q++ G+ + L + + + E + + Y L+++D Sbjct: 3 IRIVIVDDQALVRSGLSMILDHQSDIEVVAECANGLEAIEAAKKYIPDLILMDIRMPEMD 62 Query: 61 CYWLLQKTVVQFP-EVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 + + +++I +T ++ + + +D+ + AV+ A Sbjct: 63 GLSATSAILGDLNIQTRIVILSTFDLDEYIYRALREGASGFILKDTPPDELVAAVHVVAQ 122 Query: 120 GMMFLPGDWRTTPEKDIKDL-----------KSLSARQREILTMLAAGESNKEIGRALNI 168 G L +L L+ R++EIL LA G +N EI L I Sbjct: 123 GGALLTPSITKKLIGAFAELKPSHTNVTGHIDRLTTREKEILKNLALGFNNSEIASRLFI 182 Query: 169 STGTVKAHLESLYRRLEVKNRTQAAMMLNI 198 TVK H+ SL +LE+++R QA + Sbjct: 183 GESTVKTHVSSLLSKLELRDRAQAVIFAYE 212 >UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NIZ3_ROSCS Length = 230 Score = 258 bits (661), Expect = 8e-68, Method: Composition-based stats. Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 9/204 (4%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 ++++ D + G+ L + A + +P LVM+D Sbjct: 15 RVLIVDDHELARAGLAAVLACEPGIEVVGEADNGAAALDFVARHPVDLVMMDLQMPVIDG 74 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 ++ P + +++ L E + V + +D++ AV G Sbjct: 75 IEATRRIKALHPAIGIIMVTVQAKPDALMEALRAGVAGYLLKDASRREIIGAVRQVLRGE 134 Query: 122 MFLPGDWR---------TTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 FL D TP D ++ L+ R++++L +L G++N+EI R L IS GT Sbjct: 135 AFLNPDLVLQTLRRLAHATPTDDATPIEPLTPREQQVLRLLMQGKTNREIARELIISPGT 194 Query: 173 VKAHLESLYRRLEVKNRTQAAMML 196 VK H+E + +L V +RTQAA+ Sbjct: 195 VKVHVEHIIAKLGVSDRTQAAVRA 218 >UniRef50_B4CWX5 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B4CWX5_9BACT Length = 210 Score = 258 bits (661), Expect = 8e-68, Method: Composition-based stats. Identities = 44/192 (22%), Positives = 81/192 (42%), Gaps = 1/192 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D + G+ SL + A A E + + +V++D G Sbjct: 7 IRILVVDDHHVVRSGLAASLGLEDDLNVVGEAGNAGEAVTQFRKHHPDVVLMDLRLPGAN 66 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++P+ +VL+ T + + + + + + E A+ + A G Sbjct: 67 GTAATADLRREWPDARVLMFTTFDGEEDIYRAMQAGARGYLLKSAAREELLSAIRAVAAG 126 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 L + S R+RE+L ++A G++NKEI AL IS TVK H +L Sbjct: 127 ERHLSAALAQRLAGRVAAPDV-SDREREVLQLIARGKANKEIAAALGISEETVKRHASNL 185 Query: 181 YRRLEVKNRTQA 192 + ++ V +R QA Sbjct: 186 FVKMGVADRAQA 197 >UniRef50_B1ZY58 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=B1ZY58_OPITP Length = 223 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 1/196 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D G+ ++ + + AS +E + + +V++D G Sbjct: 20 IRVLVVDDHPPMRVGLVALIRSQPGMDVVAEASDGEEAIEIYDDLQPDVVLMDLRMPGMG 79 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + PE +V++ +T + + + + +D +E A V + G Sbjct: 80 GVEAILAIRKKAPEARVIVLSTYDWDEDIHRALQSGAKSYLLKDMPIEEIASTVRAVYAG 139 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 LP + + + L+ R+R++L L G SNKEI +L IS TVK+HL++L Sbjct: 140 DTSLPRSVAERLTERAQR-EQLTERERDVLESLIKGRSNKEIASSLCISEDTVKSHLKTL 198 Query: 181 YRRLEVKNRTQAAMML 196 + +L V++RT AA+ Sbjct: 199 FAKLRVRDRTGAAIEA 214 >UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=C7QHJ1_CATAD Length = 222 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 43/207 (20%), Positives = 81/207 (39%), Gaps = 8/207 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D I G++ + AS + + +V++D Sbjct: 12 LRLLIVDDHPIVRDGLRGVFDGEDGFEVVGEASDGAQALVRAAESGPDVVLMDLRMPTMG 71 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +++ V+ P V+VL+ T + + I + +D+ E AV +AA G Sbjct: 72 GVEAIRRLRVEQPAVRVLVLTTYDTESDVLPAIEAGATGYLLKDAPREDLIRAVRAAAAG 131 Query: 121 MMFLPGDWRTT--------PEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 L + +L+ R+ E+L ++A+G +N+E R L IS T Sbjct: 132 QPVLAPTVAQRLMTRVQTPLAEPAPPGDALTERELEVLRLVASGTTNRETARKLFISEAT 191 Query: 173 VKAHLESLYRRLEVKNRTQAAMMLNIS 199 VK HL Y + V++R A Sbjct: 192 VKTHLLHAYAKFGVRDRAAAVAEAYKR 218 >UniRef50_UPI0001B502C9 two component LuxR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B502C9 Length = 229 Score = 256 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 42/202 (20%), Positives = 89/202 (44%), Gaps = 3/202 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D ++ G+++ L + + E + +V++D Sbjct: 3 LRVLIADDHAVVRQGLRMILGLDNEIKVVGETTNGREAVRLARELCPDVVLMDLLMPVMD 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + PEV+V+ + + + + + + +++ + AV +AA G Sbjct: 63 GVSATAEIRQDIPEVEVVALTSSLDDAMVMGAVRAGAIGFLLKNAEADDLRNAVKAAAAG 122 Query: 121 MMFLPGDWRTTP---EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHL 177 + + + ++ + L+ R+ E+LTMLA G++NKEI R L I TVK ++ Sbjct: 123 QIHVSPAAISRLMGQVREPSGPEQLTERETEVLTMLARGKANKEIARDLRIGQQTVKTYV 182 Query: 178 ESLYRRLEVKNRTQAAMMLNIS 199 + +L V +RTQAA+ S Sbjct: 183 SHILTKLGVHSRTQAAVYAVQS 204 >UniRef50_P94439 Uncharacterized transcriptional regulatory protein yfiK n=4 Tax=Bacillales RepID=YFIK_BACSU Length = 220 Score = 256 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 15/210 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D Q I G+ LQ R I A E ++K + +V++D Sbjct: 2 IKIIITDDQDIVREGLASLLQLREELDVIATARNGQEAFEKAKELEPDIVLMDIRMPVSN 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + P VKVL+ T + + E + + +D + +T AV + G Sbjct: 62 GVEGTKLITSSLPSVKVLMLTTFKDSALIAEALEEGASGYLLKDMSADTIVKAVMTVHSG 121 Query: 121 MMFLPGDWRTTPEKD---------------IKDLKSLSARQREILTMLAAGESNKEIGRA 165 M LP + + +L L+ R+ E+L L G +NKEI Sbjct: 122 GMVLPPELTAQMLNEWKREKQLKGINEIEKPNELLDLTEREIEVLAELGYGLNNKEIAEK 181 Query: 166 LNISTGTVKAHLESLYRRLEVKNRTQAAMM 195 L I+ GTVK H+ ++ +L V++RTQAA+ Sbjct: 182 LYITEGTVKNHVSNIISKLAVRDRTQAAIY 211 >UniRef50_Q024A4 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q024A4_SOLUE Length = 225 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 86/199 (43%), Gaps = 1/199 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G+ + + + A E + ++++D G Sbjct: 23 IRVLIADDHPVVCLGLLGIINGQPDMTVVGQAKTGTEAVALARKHSPDVILMDLRMPGMS 82 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + PE V++ T +++ + + + + + A+ S G Sbjct: 83 GVEATEVIRAERPESAVIVLTTYQGDEDIRKALAAGAQSYLLKGMSHLKLLEAIRSVRTG 142 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 + P R + + +LS R+ +IL ++ G SN+EI ALNI+ GTVK H+ + Sbjct: 143 HTYFPRAIRNSVPGKLNR-AALSPREMDILRLIVRGLSNQEIADALNITRGTVKWHVNII 201 Query: 181 YRRLEVKNRTQAAMMLNIS 199 RRL+V +RTQA ++ Sbjct: 202 LRRLDVNDRTQAVVVAVQR 220 >UniRef50_A3CKH3 Two-component system transcriptional regulator (CheY domain and HTH-like DNA-binding domain), putative n=30 Tax=Bacteria RepID=A3CKH3_STRSV Length = 227 Score = 255 bits (654), Expect = 4e-67, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 89/212 (41%), Gaps = 14/212 (6%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D Q++ ++I L + E+ +KL ++++D Sbjct: 2 IKVLIADDQALIRESLQIILSAHADIEVVGTVGDGKEVLEKLHRVRPDVILMDIRMPVMD 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + Q+P+VK++I T + ++ + + + + + E A+ + G Sbjct: 62 GVLCTKAVKEQYPDVKIIILTTFDDDEFIFSALKYGASGYILKGVSTEELHEAIQTVYRG 121 Query: 121 MMFLPGDWRTTPEK--------------DIKDLKSLSARQREILTMLAAGESNKEIGRAL 166 + + T K ++++ +S + +I+ + G SNKEI L Sbjct: 122 GAMINPNIATKVFKIFSQMAQSNFAITVTEENIEDMSRTEWKIIQQIGFGISNKEIAAKL 181 Query: 167 NISTGTVKAHLESLYRRLEVKNRTQAAMMLNI 198 +S GTV+ +L + +L +++RTQ A+ Sbjct: 182 FLSEGTVRNYLSGILAKLNLRDRTQLAIWAVQ 213 >UniRef50_A9B5L0 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5L0_HERA2 Length = 207 Score = 255 bits (653), Expect = 7e-67, Method: Composition-based stats. Identities = 42/202 (20%), Positives = 86/202 (42%), Gaps = 3/202 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + HG+ L + A+ + +E +V+LD Sbjct: 2 IRVLVVDDHPVVRHGLMAMLGWEQDFEPVGDAADGQQAVNLIEQQQPDVVLLDLRLPQLS 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +++ T P + L+ T ++ ++ + +D++ E A+ S G Sbjct: 62 GIEVMRHTRASAPNTRFLVLTTYDTDEYIGPALNAGAAGYLLKDASPEEVFRAIRSIYEG 121 Query: 121 MMFLPGDWRTTPEKDI---KDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHL 177 L K + LS R+ ++L +L GESNK I +LNIS T+K+H+ Sbjct: 122 GAALQSGIAARVLKRLATEPAEDELSQRELDVLQLLVRGESNKAIALSLNISENTIKSHV 181 Query: 178 ESLYRRLEVKNRTQAAMMLNIS 199 ++ +L+V++R +A + Sbjct: 182 SHIFSKLDVRSRAEAVAVALQR 203 >UniRef50_D1C6S1 Two component transcriptional regulator, LuxR family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6S1_SPHTD Length = 223 Score = 255 bits (653), Expect = 7e-67, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 87/206 (42%), Gaps = 10/206 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + +++ D ++F G+ L + + A+ +E ++ +V++D D G Sbjct: 4 ISLLLVDDHALFREGLASLLSYQPDFTVVGEAASGEEAVERARELVPDVVLMDIDLPGID 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ Q PEV+V++ + L + I + ++ + A G Sbjct: 64 GIEATRRIKRQLPEVRVVMLTVYDDHERLFQSIKAGAQGYLIKNIRSAELLDQLRGLARG 123 Query: 121 MMFLPGDWRTTPEKDIKDLKS----------LSARQREILTMLAAGESNKEIGRALNIST 170 + ++ L+ LS R+ E+L ++A SNKEI L+IS Sbjct: 124 EAAISRRMAARILEEFARLERQAEILEPDGGLSPREVEVLELVALRLSNKEIAARLSISE 183 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 TVK HL+++ +L++ +R QAA Sbjct: 184 HTVKNHLKNILAKLQLSSRRQAAAYA 209 >UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmicutes RepID=VRAR_STAA1 Length = 209 Score = 255 bits (652), Expect = 8e-67, Method: Composition-based stats. Identities = 42/200 (21%), Positives = 88/200 (44%), Gaps = 4/200 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++++ D + G+ L + + + E K L+++D + Sbjct: 3 IKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKPDLILMDLLMEDMD 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + P++KVL+ + + + + V + + + ++ + A AV + G Sbjct: 63 GVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTSRG 122 Query: 121 MMFLPGDW----RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAH 176 + R +K + + L+ R+ EIL ++A G SN+EI A +I+ TVK H Sbjct: 123 ESVFEPEVLVKMRNRMKKRAELYEMLTEREMEILLLIAKGYSNQEIASASHITIKTVKTH 182 Query: 177 LESLYRRLEVKNRTQAAMML 196 + ++ +LEV++RTQA + Sbjct: 183 VSNILSKLEVQDRTQAVIYA 202 >UniRef50_B8FX94 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FX94_DESHD Length = 212 Score = 255 bits (652), Expect = 8e-67, Method: Composition-based stats. Identities = 45/202 (22%), Positives = 87/202 (43%), Gaps = 6/202 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++V+ D + G++ L+ + + ++++D + G Sbjct: 2 IRVVIADDHPLLREGLRRILEFEEGIQVVCEVGDGQGAINVSRTLDFDILLMDLNMPGVN 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + + +L+ D + + +V+ V + +D +T ++ G Sbjct: 62 GLEACRVIRRENETIGILVLTVDDSDEKVFQVLQLGVAGYLLKDVDPKTLIDSIRKVHSG 121 Query: 121 MMFLPGDWRTTPEKDI------KDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVK 174 L + +D LS R+ +ILT + G SN+EIG+AL IS TVK Sbjct: 122 QPILSPAVTGKLLGQLVHPTQNRDTCGLSDRELQILTYVVKGSSNREIGQALFISEKTVK 181 Query: 175 AHLESLYRRLEVKNRTQAAMML 196 HL S++R+L V++RTQAA+ Sbjct: 182 NHLSSIFRKLAVEDRTQAALKA 203 >UniRef50_UPI0001789139 two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=UPI0001789139 Length = 216 Score = 255 bits (652), Expect = 8e-67, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 83/208 (39%), Gaps = 13/208 (6%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKL-ESYPEALVMLDGDQDGE 59 + +++ D +K+ + A +E L + +V++D Sbjct: 2 ISVLIADDDPFIRESLKLLVGMDPDIEVSAVAEHGEEALSLLMDGLHADVVLMDIRMPVC 61 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 ++ ++P+V+VL+ T + ++ E + + ++ + + + Sbjct: 62 DGVEGTRRIRERYPDVRVLMLTTFDDDDYIVEALRNGASGYLLKNIPPDRIIQGIKTVHD 121 Query: 120 GMMFLPGDWRTTPEKDIKDLKS------------LSARQREILTMLAAGESNKEIGRALN 167 G M + D ++ L+ ++ ++ ++A G SNKEI L Sbjct: 122 GNMLIHPDIARKLTGMLRPTPQPVPRSAELEQFGLTPAEKRVVALIAEGLSNKEIAAQLY 181 Query: 168 ISTGTVKAHLESLYRRLEVKNRTQAAMM 195 +S GTVK ++ + +L +++RTQ A+ Sbjct: 182 LSEGTVKNYVTEILGKLNLRDRTQIAIF 209 >UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ Length = 218 Score = 255 bits (652), Expect = 9e-67, Method: Composition-based stats. Identities = 49/210 (23%), Positives = 89/210 (42%), Gaps = 14/210 (6%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQD-GE 59 M+IV+ D ++ G + L + + A+ E +QK+ + +++LD GE Sbjct: 1 MKIVIADDHAVVRTGFSMILNYQEDMEVVATAADGVEAYQKVLEHRPDVLILDLSMPPGE 60 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 K FP+ K+LI ++ +L V+ + ++S E LAV + Sbjct: 61 SGLIATSKISESFPDTKILILTMFDDEEYLFHVLKSGAKGYILKNSPDEQLILAVRTVYQ 120 Query: 120 GMMFLPGDWRTTPEKD-------------IKDLKSLSARQREILTMLAAGESNKEIGRAL 166 G ++ T+ + K LS R+ EIL ++A G NK+I L Sbjct: 121 GETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNKDIAEKL 180 Query: 167 NISTGTVKAHLESLYRRLEVKNRTQAAMML 196 +S TV+AH + +L +K++ + Sbjct: 181 FVSVKTVEAHKTHIMTKLNLKSKPELVEYA 210 >UniRef50_A4VZN8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=52 Tax=Bacilli RepID=A4VZN8_STRS2 Length = 213 Score = 255 bits (652), Expect = 9e-67, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 86/199 (43%), Gaps = 3/199 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G+K L + + AS +E K +V++D Sbjct: 4 IRVMLVDDHEMVRLGLKSYLNLQPDVEVVAEASDGEEGLAKALEVKPDVVVMDLVMPKMT 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + ++P+ +++I + + + V+ + + S+ + A+ A+G Sbjct: 64 GVEATLALLKEWPQAQIVILTSYLDNEKIYPVLEAGARGYMLKTSSADEILAAIRKVALG 123 Query: 121 MMFLPGDWRTTPE---KDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHL 177 + + E + L+AR+REILT+LA G N+ I IS TVK H+ Sbjct: 124 EYAIETEVEKKVEHHKRHPDLHDDLTAREREILTLLAKGYDNQRIADESFISLKTVKTHV 183 Query: 178 ESLYRRLEVKNRTQAAMML 196 ++ +L V +RTQA + Sbjct: 184 SNILSKLAVSDRTQAVVYA 202 >UniRef50_C6CZA5 Two component transcriptional regulator, LuxR family n=4 Tax=Firmicutes RepID=C6CZA5_PAESJ Length = 221 Score = 255 bits (652), Expect = 9e-67, Method: Composition-based stats. Identities = 44/208 (21%), Positives = 96/208 (46%), Gaps = 10/208 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPE----ALVMLDGDQ 56 +++++ D + G++ L + A LE+ ++++D Sbjct: 7 LKVMIVDDHDMVRTGLRTYLMLEPKFEVVAEAGSGQAAISMLEAGLPSGLPDVILMDLMM 66 Query: 57 DGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS 116 G ++ +V++P +K+++ + + I ++ V + + E A++ Sbjct: 67 PGMDGIETTRQLIVEYPNLKIIMLTSFLEDDKVYGAIEAGAVSYVLKTVSAEELIYALHG 126 Query: 117 AAMGMMFLPGDWRTTPEKDIKDL------KSLSARQREILTMLAAGESNKEIGRALNIST 170 A GM + D + ++ + L+ R++E+L ++A G SNKEIG L+IS Sbjct: 127 AVKGMPVMTADVSQALTRGLRQRTAQSGDEELTEREKEVLLLIAEGRSNKEIGEELHISV 186 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMMLNI 198 TVK H+ +L + E+++RTQ A++ + Sbjct: 187 KTVKTHVSNLLMKCELEDRTQLAVLAHR 214 >UniRef50_P55184 Uncharacterized transcriptional regulatory protein yxjL n=1 Tax=Bacillus subtilis RepID=YXJL_BACSU Length = 218 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 83/206 (40%), Gaps = 10/206 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++ + D Q + G + + + A ++ + ++++D Sbjct: 6 IRVALADDQPLVREGFRYVINAQTDMTVSGEAGDGHDIIALAKQTKPDVILMDVQMPRCS 65 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + P K++I T + ++ E I + + +D+ E A+ +AA G Sbjct: 66 GIEAAKDIMSALPNTKIVILTTFDTEEYVFEGIRAGAVGYLLKDTLPEELIDAIRAAARG 125 Query: 121 MMFL---------PGDWRTTPEKDIKDL-KSLSARQREILTMLAAGESNKEIGRALNIST 170 +R + ++L + + R+ E+L +A G N++I L +S Sbjct: 126 EAIFRTVTAAKIISETFRAKQQTHAEELAEPFTKRELEVLQQMAYGLRNEDIAEKLFVSE 185 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 TVK H+ + ++ ++RTQA + Sbjct: 186 STVKTHVHRILQKCNAQDRTQAVVFA 211 >UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR family n=10 Tax=Bacteria RepID=Q1IXN1_DEIGD Length = 221 Score = 254 bits (650), Expect = 1e-66, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 94/199 (47%), Gaps = 3/199 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D ++ G+++ L + A+ +E E +V++D Sbjct: 10 VRVLLVDDHAVVRQGLRLFLSLDSQIEVVGEAANGEEALAAAERLHPDVVIMDLMMPVMD 69 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + Q P+ +V+ + + + I + + +D++ +T A A+++AA G Sbjct: 70 GIQATRLLRRQHPDTEVIALTSTLEEHKVNGAIDAGAMGYMLKDASSDTLADAIHAAARG 129 Query: 121 MMFLPGDWRTTPEKDIKDL---KSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHL 177 + L + +D + ++L+ ++ +L ++A G SN++I R ++ TVK H+ Sbjct: 130 EVRLHPEAARRLVRDFRTPEMRETLTPKEVIVLQLIARGYSNRDIARDQGVTEATVKTHV 189 Query: 178 ESLYRRLEVKNRTQAAMML 196 L +L +++RTQAA+ Sbjct: 190 SRLLGKLGLESRTQAALYA 208 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 11/206 (5%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 +I++ D ++F G++ L A+ A + + +V++D G Sbjct: 5 KILLTDDHTLFRQGVRTLLAAEADMEVAGEAANAMDAVALAQQLRPDVVLMDIGMAGMSS 64 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 + + + PEVKV+ + ++ +L E + + +DS + A+ G Sbjct: 65 FEATRLIRKERPEVKVIFLSMYDDEDYLAECVDMGANGYILKDSPADQLITAIREVQRGG 124 Query: 122 MFLPGDWRTTPEKDIK-----------DLKSLSARQREILTMLAAGESNKEIGRALNIST 170 +L + D + +L+ R+REIL MLA G+S KEI +S Sbjct: 125 SYLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKEIAAFFELSV 184 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 TV+AH +L R+L++ N+ Q Sbjct: 185 KTVEAHKFNLMRKLDIHNKAQLVQYA 210 >UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides sp. JS614 RepID=A1SGL7_NOCSJ Length = 213 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 10/203 (4%) Query: 4 VMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCYW 63 ++ D Q +F G+ + L + A E + +V+LD Sbjct: 2 LVVDDQELFRRGLTMLLGTEAGIEVVGEAGDGVEGTNLAATAAPDVVLLDIRMPKRSGIE 61 Query: 64 LLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMF 123 P K+++ + L E + + +DS++E A AV A G Sbjct: 62 ACLAIKEAVPSAKIIMLTVSDEEADLYEAVKSGASGYLLKDSSIEEVAQAVRVVADGQSL 121 Query: 124 LPGDWR----------TTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 + + PE+D L+ R+ E+L ++A G +N+EI + L IS TV Sbjct: 122 ISPSMAVKLIDEFKQMSRPERDHVPGLRLTERELEVLRLVAKGMNNREIAKELFISENTV 181 Query: 174 KAHLESLYRRLEVKNRTQAAMML 196 K H+ ++ +L++ +R +A M Sbjct: 182 KNHVRNILEKLQLHSRMEAVMYA 204 >UniRef50_A9AX03 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AX03_HERA2 Length = 218 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 44/208 (21%), Positives = 86/208 (41%), Gaps = 10/208 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D Q++ G+ I L I AS E Q ++ L+++D Sbjct: 2 IKLLICDDQAVVRDGLSIMLNLAPDLEVIAVASNGREAVQLSATWQPDLILMDLKMPIMN 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ P VK+L+ T + WL E I + +D A+ G Sbjct: 62 GIEATRQISAAQPLVKILVLTTYDDDEWLFEAIRAGAAGYLLKDMAHSDLVSAIRGTVSG 121 Query: 121 MMFLPGDWRTTPEKDIKDLK----------SLSARQREILTMLAAGESNKEIGRALNIST 170 ++ + + + L+ R+ +L ++A G +N I L +S Sbjct: 122 KAYVDPNVTARLLSQVATSRNQPPASQLTGRLTERELAVLNLIATGHTNASIAEQLRLSE 181 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMMLNI 198 GTV+ H+ ++ +L+V +RTQAA++ Sbjct: 182 GTVRNHVSTILSKLDVADRTQAALLAVE 209 >UniRef50_A9AZR3 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AZR3_HERA2 Length = 213 Score = 253 bits (648), Expect = 2e-66, Method: Composition-based stats. Identities = 43/200 (21%), Positives = 91/200 (45%), Gaps = 4/200 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D +I G++ L + + + A + + ++++D Sbjct: 5 IRIMLVDDHAIVREGLRTLLAEDTEFLIVGEAQNGADAIELAAVVRPHVILMDLVMPNVD 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 Q P ++++ + + +W+ + I + ++ LA+ + A G Sbjct: 65 GIQATQALQSLMPSSRIIVLTSFSDDQWVSKAIQAGASGYLLKNVLKAELFLAIRTVANG 124 Query: 121 MMFLPGDWRTTPEK----DIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAH 176 FL + + T + L SL+ R+R +L + G SNKEI R+L+++ GTVK + Sbjct: 125 QPFLHAEAQRTLMRQSTAPPSLLPSLTERERSVLDGIVGGLSNKEIARSLHLTEGTVKGY 184 Query: 177 LESLYRRLEVKNRTQAAMML 196 + ++ +L V +RTQAA+ Sbjct: 185 VSTILTKLAVADRTQAALYA 204 >UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomycetales RepID=A4XCA4_SALTO Length = 235 Score = 253 bits (648), Expect = 2e-66, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 82/210 (39%), Gaps = 11/210 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D Q + +++ + + V A +E + +V++D G Sbjct: 3 IEVLVVDDQPLVRSALRMVVAEVDDMVIAGEAETGEEAVRLTRELKPDVVLMDLRMPGMG 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + V PE +VL+ T + + + ++ +++ AV + A G Sbjct: 63 GIEATGQIVRLSPETRVLVLTTFDEDDHVFGALQAGAAGFLIKNMSLDDILDAVRTVAHG 122 Query: 121 MMFLPGDWRTTPEK-----------DIKDLKSLSARQREILTMLAAGESNKEIGRALNIS 169 L K + L ++ R+RE+LT++ G SN EI L +S Sbjct: 123 NGLLAPSVTRRLIKHVVDTRTAPTVPRRPLSGITEREREVLTLVGRGLSNSEIADELRLS 182 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 TVK ++ L +L ++R + + Sbjct: 183 HATVKTYITRLLSKLGARDRVHLVIAAYEA 212 >UniRef50_C1B8T3 NarL family two-component response regulator n=61 Tax=Bacteria RepID=C1B8T3_RHOOB Length = 276 Score = 253 bits (648), Expect = 2e-66, Method: Composition-based stats. Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 2/194 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQ-DGE 59 +++++ D +I G++ L+ + A+ AD + P LV++D G Sbjct: 2 IRLLLADDHAIVRAGLRALLEHEDDIEVVGEAATADAAVALCATTPVDLVLMDLRFGPGT 61 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 + VL+ + + + + +D+ AV +A+ Sbjct: 62 SGVDATRNLRSLPNPPHVLVVTNYDTDADILDAVAAGAAGYLLKDTPPPELLAAVRAASA 121 Query: 120 GMMFLPGDWRTTPEKDIKDLK-SLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLE 178 G L + ++ SLS R+ ++LT++AAG SN+EIG+ L +S TVK+HL Sbjct: 122 GDSVLSPAVASKLMTRVRRPATSLSPREIQVLTLVAAGRSNREIGKELFLSETTVKSHLV 181 Query: 179 SLYRRLEVKNRTQA 192 ++ +L VK+RT A Sbjct: 182 HIFGKLGVKSRTSA 195 >UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ8_HALOH Length = 209 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 92/200 (46%), Gaps = 4/200 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +Q+ + D + G+K L R + + ++ +++ + ++D G Sbjct: 2 IQVYLVDDHPFVLQGLKAYLNTREGIEIVGTSGNGEKAIKEIAKLNPEVAVVDLRLPGLN 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + ++ + P +V+I ++ + + E I L+ V +DS E A+ +A G Sbjct: 62 GIEVTREIKKKNPGTEVIILSSFNKEDEVIEAIDAGALSYVMKDSRPEKLVEAIKAARRG 121 Query: 121 MMFLPGDWR----TTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAH 176 L + + + L+ R++E+L L G SN++I + L IS TVK H Sbjct: 122 EPVLTPGVAKKIMKRAARKGRKTEPLTPREKEVLACLVRGNSNRDIAKTLCISETTVKTH 181 Query: 177 LESLYRRLEVKNRTQAAMML 196 + ++ ++L+VK+RTQA + Sbjct: 182 VSNILKKLDVKDRTQAVIKA 201 >UniRef50_A6TVR4 Two component transcriptional regulator, LuxR family n=5 Tax=Firmicutes RepID=A6TVR4_ALKMQ Length = 208 Score = 253 bits (647), Expect = 3e-66, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 92/202 (45%), Gaps = 7/202 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 M++++ D ++ +KI + + AS E ++ + Y L+++D Sbjct: 1 MKVLIVDDDALIRDSLKILIDLEADFTVVGTASNGQEAFEFCKEYAPDLILMDIRMPIMD 60 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + F ++++I T + ++++E + + + + ++ ++ + + G Sbjct: 61 GVLATKMIKESFGSIRIIILTTFKDDQYIKEALKNGAQGYILKSQSADSIIESLRTVSKG 120 Query: 121 MMFLPGDWRTTPEKDIKDLK-------SLSARQREILTMLAAGESNKEIGRALNISTGTV 173 + + + +K+ K L+ R+ EI+ + G SN+EI AL +S GTV Sbjct: 121 NVVFETEIASVLTSMLKEEKEKHHLDLQLTEREHEIIKWVGEGLSNREISAALYLSEGTV 180 Query: 174 KAHLESLYRRLEVKNRTQAAMM 195 + ++ L +L V++RTQ A+ Sbjct: 181 RNYVTQLLEKLNVRDRTQLAIF 202 >UniRef50_B4D831 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B4D831_9BACT Length = 209 Score = 253 bits (647), Expect = 3e-66, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 87/199 (43%), Gaps = 1/199 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D ++ G+ ++ + A+ + ++ + +V +D G Sbjct: 5 IRVLIVDDHAMMRLGLVEAIAGERDLTLVGEAANGTQCLEQYRKHQPDVVTMDFRLPGAD 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +FP+ +V++ + + + + + V + + VE A+ G Sbjct: 65 GAESTAHLRTEFPDARVVVLSVFEGEEDIWRAVEAGAMGYVSKSAEVEEVLEAIRCVVGG 124 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 + P + + +L+ R+ ++L + AG SNKEI AL++S TVK H+ + Sbjct: 125 ETYFPAPIASKLASR-RTRDALTPREHQVLHHIVAGLSNKEIAAALHMSEATVKLHISNT 183 Query: 181 YRRLEVKNRTQAAMMLNIS 199 +L V +RTQAA++ Sbjct: 184 LAKLHVADRTQAAIVAVQR 202 >UniRef50_D1VBH1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=D1VBH1_9ACTO Length = 248 Score = 252 bits (646), Expect = 4e-66, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 81/213 (38%), Gaps = 14/213 (6%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + + G + ++ + A+ ++ +V++D Sbjct: 26 IRVLIADDEGLVRAGFRALVEATPDLTVVAEAADGVAAVRESRRLRPDVVLMDIRMPVMN 85 Query: 61 CYWLLQKTVVQF--PEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAA 118 + P +L+ T + ++ E + + +D+ E A+ + A Sbjct: 86 GLEATRLIAADAVRPGPGILVVTTFDDDEYVFEALRAGAAGFILKDTQPENLLAAIRTVA 145 Query: 119 MGMMFLPGDWRTT--------PEKDIKDL----KSLSARQREILTMLAAGESNKEIGRAL 166 G L P L +L+ R+R +LT +A G SN EI +AL Sbjct: 146 AGDALLAPGVTRRLIAAFVRVPAPPASPLTGLASTLTDRERAVLTQIANGYSNAEIAQAL 205 Query: 167 NISTGTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 +S TVK H+ L +L ++R Q + S Sbjct: 206 YVSVSTVKTHVGHLLAKLAARDRAQLVIAAYES 238 >UniRef50_A1SKW0 Two component transcriptional regulator, LuxR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SKW0_NOCSJ Length = 215 Score = 252 bits (646), Expect = 4e-66, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 83/197 (42%), Gaps = 1/197 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + +++ D ++ G + L+Q + A+ ++ + +V++D G Sbjct: 6 IAVLVVDDHTLHRDGTRRILEQYDDVDVVGDAASGEDALAMVNRLHPRVVLMDIRLPGMN 65 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ + P+ +VLI ++ +++ + + + AV + A G Sbjct: 66 GIEATRRIRERHPDTRVLIVTAYDDEEYVRGAFDVGAAGYLSKTAPGRELVEAVRAVAGG 125 Query: 121 MMFLPGDW-RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLES 179 L K +L+ R+R +L +LA G NK+I L IS TV+ H + Sbjct: 126 NSVLQPTLMAALLAKRSSPANTLTDRERAVLRLLAEGMHNKQIASRLGISARTVERHCDR 185 Query: 180 LYRRLEVKNRTQAAMML 196 +Y +L V +RT+A + Sbjct: 186 IYGKLGVTSRTEAVVRA 202 >UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococci RepID=Q9RU37_DEIRA Length = 225 Score = 252 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 97/199 (48%), Gaps = 3/199 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D ++ G+++ L + A+ +E Q+ E +V++D Sbjct: 14 VRVLLVDDHAVVRQGLRLFLGLDEGIEVVGEAANGEEALQEAERLRPEVVVMDLMMPVMD 73 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ + P+ +V+ + + + I ++ + +D++ +T A A+++AA G Sbjct: 74 GITATRELRRRLPDTEVIALTSTLEENKVNGAIEAGAISYMLKDASSDTLADAIHAAARG 133 Query: 121 MMFLPGDWRTTPEKDIKDL---KSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHL 177 + L + +D + +SL+ ++ +L +LA G+SNK+I +S TVK H+ Sbjct: 134 EVRLHPEAARRLVRDFRSPEMRESLTPKETAVLQLLARGQSNKDIAAEQGVSEATVKTHV 193 Query: 178 ESLYRRLEVKNRTQAAMML 196 L +L + +RTQAA+ Sbjct: 194 SRLLSKLGLDSRTQAALYA 212 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 252 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 1/197 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D I G+K L + + A DE + ++ +V+LD + G Sbjct: 5 IRVLVADDHPIVRQGLKTFLDIQPDLSVVAEARDGDEALALIAAHEPDVVLLDLNMPGSD 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +L + KV++ + + E + + +D ++ A A+ S A G Sbjct: 65 GAKVLTRLAASDHRAKVIVLTSVTEAVRVTEAVAAGAAGFLYKDIDPDSLAQAIRSVADG 124 Query: 121 MMFLPGD-WRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLES 179 + + + +L+AR+RE+L ++AAG SN+EI + L+++ TVK HL S Sbjct: 125 QVIFAREAVTAMTAPAPGPVAALTAREREVLALVAAGRSNREIAKQLSVAEKTVKTHLSS 184 Query: 180 LYRRLEVKNRTQAAMML 196 L+R+L V +RTQAA+ Sbjct: 185 LFRKLGVADRTQAALYA 201 >UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR family n=29 Tax=Alphaproteobacteria RepID=Q1GIA7_SILST Length = 233 Score = 252 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 38/197 (19%), Positives = 88/197 (44%), Gaps = 1/197 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G++ L+ + S E + E+ ++++D + Sbjct: 24 IRVLIVDDHPMVAEGIQSILESYGDIEVVGAVSSGREAIARAEALVPDVILMDLNMPDVG 83 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + PE++VLI + + ++ + + V +D E A+++ G Sbjct: 84 GLSATEIIQERCPEIRVLILSMHDSPEYITTALSHGAVGYVLKDVQPEEIKTAIDAVMRG 143 Query: 121 MMFLPGDWRTTPEKDIK-DLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLES 179 +L + + ++L+ R++ IL LA G+SNKE+ +AL+IS TV+ H ++ Sbjct: 144 EQYLCTGAAGSLSPQSQTSREALTGREQTILLELAQGKSNKEVAQALDISVRTVETHRKN 203 Query: 180 LYRRLEVKNRTQAAMML 196 + R+L + + Sbjct: 204 IKRKLGISSTAGLTRYA 220 >UniRef50_C7R398 Two component transcriptional regulator, LuxR family n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R398_JONDD Length = 230 Score = 252 bits (645), Expect = 5e-66, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 88/211 (41%), Gaps = 13/211 (6%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 +I++ D ++ G+++ L + + +E ++ +V++D Sbjct: 10 RIIIVDDDALVRAGLRMILGGDPGITVVAEGTHGEEAVSLYAAHQPDVVLMDIRMPVRDG 69 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 + V ++P VL+ T ++ + + + +D++ AVN A G Sbjct: 70 LSATKDIVTRWPHANVLVLTTFDTDEFIVKALRAGARGFLLKDTSPPDLVRAVNLAGDGH 129 Query: 122 MFLPGDWRTTP-------------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNI 168 L + + ++ L+ R+ ++ +A G+SN+EI + L + Sbjct: 130 PTLSPSVTAQLIAKVSEEPDTGRQRQARRMVEQLTERELDVAQQIAQGKSNQEISQTLYM 189 Query: 169 STGTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 S TVK H+ ++ + +V NR Q A+ ++ + Sbjct: 190 SIPTVKTHISRIFTKFDVDNRVQIAIRMHDA 220 >UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QY5_SYMTH Length = 218 Score = 252 bits (645), Expect = 6e-66, Method: Composition-based stats. Identities = 41/206 (19%), Positives = 82/206 (39%), Gaps = 11/206 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 M++++ D + G+ L I AS E + + LV++D + Sbjct: 1 MKVLIVDDHLMLRKGVLSVLSNT-DLEVIGEASNGQEALELVPKLKPDLVLMDINMPVLD 59 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +K +P++KV+I + L E I + ++ E ++ +A G Sbjct: 60 GVEATRKLKQMYPDLKVVILTVSEIDKDLFEAIKAGADGYLLKNLGPEELVSSLRAAISG 119 Query: 121 MMFLPGDWRTTPEKDIK----------DLKSLSARQREILTMLAAGESNKEIGRALNIST 170 + K+ + + LS R+ E+L + + G + KEI L ++ Sbjct: 120 EAPISSVMAAKMLKEFRQPRANTTGKQPGQQLSPREIEVLRLASTGLTYKEIAAKLYVAE 179 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 TVK H+ + +L ++NR++A Sbjct: 180 STVKNHMRHILEKLHLRNRSEAVGYA 205 >UniRef50_B9XAM6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=B9XAM6_9BACT Length = 209 Score = 252 bits (645), Expect = 6e-66, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 80/199 (40%), Gaps = 1/199 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D + G+ + + A+ + + L ++D + Sbjct: 7 IRILIADDHYVVRMGLIALVNTEPDMEVVAEAADGAQALELFAKCNPDLALMDLRMPVKS 66 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + +F VL+ + + + V + ST E A+ + A G Sbjct: 67 GVQATLEIRNRFATACVLMLTAFDGDEDIHKALQAGAQGYVLKSSTGEKLIPALRAVAAG 126 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 ++P + + LS R+ ++L+ LA G +NKEI LNI+ T K HL+S+ Sbjct: 127 QRWIPKEVANRLALR-NSFEQLSPREVQVLSELARGLANKEIADVLNITEHTTKDHLKSI 185 Query: 181 YRRLEVKNRTQAAMMLNIS 199 +L V +RT+A + Sbjct: 186 LAKLRVADRTEAVTVALQR 204 >UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=C4L5Q6_EXISA Length = 230 Score = 251 bits (644), Expect = 6e-66, Method: Composition-based stats. Identities = 44/216 (20%), Positives = 85/216 (39%), Gaps = 21/216 (9%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 +I + D +F G+K + E + ++++D + Sbjct: 7 RIAIVDDHELFREGLKRIFDLEDEFTVVAEGRTGREAIRIAGEQKPEILIMDINMPDMNG 66 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 ++ + PE +VLI + ++ ++ + + ++ AV + A Sbjct: 67 IEATKQLSLLSPETRVLILSIHDDESYITHALEAGASGFLLKEVASTELISAVRAVAKDG 126 Query: 122 MFLPGDWRTTPEKDIKDL---------------------KSLSARQREILTMLAAGESNK 160 +L T K+ + L + LS R+ E+L +LA G SN+ Sbjct: 127 AYLHPKVTTNVLKEYRRLLQFKGEQAGRGVESRTDDPVYQLLSRREVEVLHLLADGRSNR 186 Query: 161 EIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMML 196 +I L IS TVK H+ S+ R+++V +RTQA + Sbjct: 187 DISDMLFISEKTVKNHVSSVLRKMDVNDRTQAVVDA 222 >UniRef50_C4ZEG3 Two-component response regulator (Extracellular proteinase response regulator) n=3 Tax=Bacteria RepID=C4ZEG3_EUBR3 Length = 214 Score = 251 bits (644), Expect = 7e-66, Method: Composition-based stats. Identities = 48/203 (23%), Positives = 96/203 (47%), Gaps = 7/203 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + I++ D S+ G+K L+ I A ++ KL+++ +++LD + Sbjct: 3 INIMITDDHSMIREGLKNLLELDGDIKVIAEAENGEDCLDKLKTFRPDVLLLDINMPKMN 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +L+ + +VKVL+ +L + + + V +DS A+ + A G Sbjct: 63 GLEVLKALKDRKSKVKVLVLTVHNETEYLMKAVDIGINGYVLKDSESAELKKAIFTIADG 122 Query: 121 MMFLPGDWRTTP-------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 ++ +D + +L+ R+ E+L +A G+ N++I + + IS TV Sbjct: 123 ETYIQPSLIPALNSKMIQKNEDELKIDALTKREMEVLKEMAVGKFNRDIAKEMKISERTV 182 Query: 174 KAHLESLYRRLEVKNRTQAAMML 196 K H+ S++++LEV +RTQAA+ Sbjct: 183 KNHISSIFKKLEVTDRTQAAVFA 205 >UniRef50_UPI00018507A5 two component LuxR family transcriptional regulator n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI00018507A5 Length = 212 Score = 251 bits (644), Expect = 7e-66, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 78/203 (38%), Gaps = 12/203 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D +F G+ L I A +E Q + LV++D Sbjct: 4 IRVLIADDHPLFRQGVSSVLANTPDNEVIAEAGSGEEAVQMACNLLPDLVLMDIQMPDLN 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +K + + ++ ++I + + + V +D+ E AV + A G Sbjct: 64 GIEATRKILSKCRDIYIIIITMFEDDTSVFSAMQAGARGYVLKDAEKEDILRAVRAIAKG 123 Query: 121 MMFLPGDWRTTPEK------------DIKDLKSLSARQREILTMLAAGESNKEIGRALNI 168 + + L++R+ E+L +L+ G SN E+ L + Sbjct: 124 EVLFSSGVASRMIDYFAQGEVTQTVVASTLFPELTSRESEVLFLLSKGASNSEVAETLGL 183 Query: 169 STGTVKAHLESLYRRLEVKNRTQ 191 S TV ++ ++ +L+V +R + Sbjct: 184 SNKTVYNYVANILNKLQVSDRQE 206 >UniRef50_C0GJ72 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ72_9FIRM Length = 212 Score = 251 bits (644), Expect = 8e-66, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 83/205 (40%), Gaps = 5/205 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D S+ G+++ L+ A +++LD Sbjct: 5 IKVMLVDDHSVVRQGLRLLLELDDTMEVCGEAETLTGAVAVCAEVAPDVILLDFKLPDGD 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 QFP+VK++I + + E I + ++ E + + G Sbjct: 65 GIIGCGNLKRQFPQVKIIILTAYADDHLVTETIKAGADGYLLKNVESEELINTIQAVHKG 124 Query: 121 MMFLPGDWRTTP-----EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKA 175 L + K +L+ ++ +IL M++ G++NKEI + IS TV+ Sbjct: 125 QSVLDPSVTEILFDNIKSQQPKKEHNLTPKEVQILDMISVGKANKEIAEIMKISDKTVRN 184 Query: 176 HLESLYRRLEVKNRTQAAMMLNISS 200 ++ ++ ++L V NRT+AA +S Sbjct: 185 YVSNILQKLNVSNRTEAASYWMRNS 209 >UniRef50_D1BX47 Two component transcriptional regulator, LuxR family n=14 Tax=Actinomycetales RepID=D1BX47_XYLCX Length = 234 Score = 251 bits (643), Expect = 9e-66, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 81/217 (37%), Gaps = 19/217 (8%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPE--ALVMLDGDQDG 58 +++ + D Q + G ++ + + + A E + L + P +V++D Sbjct: 10 IRVALVDDQQMVRAGFRMVIDSQPDMTVVAEAGDGVEALRVLGALPVRADVVLMDVRMPR 69 Query: 59 EFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAA 118 +V++ T ++ E I + +D+ E A+ + Sbjct: 70 MDGLTATAALTSGADAPRVVVLTTFDIDEYVLEAIRSGASGFMLKDAPPEEMLGAIRTVH 129 Query: 119 MGMMFLPGDWRTT-----------------PEKDIKDLKSLSARQREILTMLAAGESNKE 161 G + P L +L+ R+RE+L ++A G SN E Sbjct: 130 AGDAVIAPSSTRRLLEHLVTALPTPAPDTPPSPAHAALATLTDREREVLELMARGRSNTE 189 Query: 162 IGRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNI 198 I L ++ TVK H+ + +L+ ++R QA ++ Sbjct: 190 IAADLFVAEATVKTHVGRILAKLDARDRVQAVVLAYE 226 >UniRef50_C7MN84 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MN84_CRYCD Length = 215 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 39/206 (18%), Positives = 79/206 (38%), Gaps = 10/206 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQD-GE 59 + + + D ++ G + + + A+ E + + +++LD GE Sbjct: 2 IDVAIADDHAVVRQGFAFIINSQCDMRVVGEAADGKEAYDLVARVEPHVLLLDISMPPGE 61 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 ++ FP +++I +L + V ++S+ E A+ A Sbjct: 62 NGLIACERISCDFPSTRIIILTMFEETDYLFYTLRGGAAGYVLKNSSTEVLLGAIRKVAT 121 Query: 120 GMMFLPGDWRTTPE---------KDIKDLKSLSARQREILTMLAAGESNKEIGRALNIST 170 G ++ + + LS+R+ EI ++LA G +NKE L IS Sbjct: 122 GETYIEPNMAQALSGKLHGQSGVAEKNPYHELSSREFEIFSLLAQGYTNKEAADKLFISV 181 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 TV+ H +Y +L V +R + + Sbjct: 182 KTVETHRSKIYAKLGVNSRAELVHLA 207 >UniRef50_B4D808 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D808_9BACT Length = 212 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 84/199 (42%), Gaps = 1/199 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G+ + L Q+ + A A++ + + ++D G Sbjct: 7 IRLLLVDDHFVVRSGLAMLLAQQDDFAVVAEADDAEQAVAHYRQHRPDVTLMDVRMPGAS 66 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 LQ+ +FP+ +V++ T + + + + + AV G Sbjct: 67 GIEALQRIRGEFPDARVIMLTTYDLDEDVFRALEAGAVGYLLKSVRHAELFAAVRKVHAG 126 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 +P T K+ LS R+ E L +LA G SN+EIG AL ++ T KAH++++ Sbjct: 127 ERCVPQSLETR-CKNGALRSRLSPREVETLDLLARGFSNREIGSALGVTERTAKAHVQAI 185 Query: 181 YRRLEVKNRTQAAMMLNIS 199 +LE +R +A Sbjct: 186 LVKLEAADRAEAVDAAYKR 204 >UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V5Y3_9FIRM Length = 223 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 88/212 (41%), Gaps = 16/212 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D ++ G+K L + A E + +++LD + G Sbjct: 3 IRILLADDHALLRQGIKRVLNFEDDLEVVGEAEDGQEALARTLMLKPDILLLDINMPGLT 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + ++ VK++ + ++ E++ L + +D A++ G Sbjct: 63 GLDVAKQLKQARSRVKIIALTIHDSDNYVLELLKNGALGYLLKDVEPNVLIKAIHMVNEG 122 Query: 121 MMFLPGDWRTTPEK----------------DIKDLKSLSARQREILTMLAAGESNKEIGR 164 F+ D + L+ R+ ++L +A G SN++IG+ Sbjct: 123 NPFVYPKLAERLFGTSSISGDVGRMAKEIWDESRGERLTPREMDVLGCIAKGLSNQDIGK 182 Query: 165 ALNISTGTVKAHLESLYRRLEVKNRTQAAMML 196 AL +S TVK HL S++ +L+V +RTQA + + Sbjct: 183 ALGLSEKTVKNHLTSVFHKLKVNDRTQALVYV 214 >UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Actinomycetales RepID=D2AUN6_STRRD Length = 226 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 86/211 (40%), Gaps = 12/211 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D +++ G++ L + A E + S+ +V+LD Sbjct: 2 IRVLLADDEAMIRAGVRAILAADPEIEVVAEAGDGREAIDLVLSHRPDVVLLDIRMPRMD 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + P V++ T ++ + + + +++ A G Sbjct: 62 GLAAVAELRRVAPGTAVVMLTTFGEDDYIARALGEGAGGFLLKSGDPRELLAGIHAVAEG 121 Query: 121 MMFLPGDWR------------TTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNI 168 +L T + + +L+ R+R++L ++ G SN +I R L + Sbjct: 122 AAYLSPRVAHRVITQLTGGRMTRVVAAREQVAALTPRERDVLALVGEGLSNGQIARRLYL 181 Query: 169 STGTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 GTVKAH+ ++ RL +NR QAA++ + + Sbjct: 182 VEGTVKAHVSAILTRLGARNRVQAAILAHEA 212 >UniRef50_A6M052 Two component transcriptional regulator, LuxR family n=8 Tax=Firmicutes RepID=A6M052_CLOB8 Length = 219 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 93/215 (43%), Gaps = 17/215 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + +V+ D Q I G+KI L ++ A +L + L+ ++++D Sbjct: 2 INVVLVDDQQIVREGIKIILSLDNEISILKEAENGKQLLKILQEIQPDIILMDIRMPFMN 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + ++ +KV+I T ++ + I + +D+ ++ +A G Sbjct: 62 GVEATKIVKEKYNNIKVIILTTFNEDEYVLQGIRNGADGYILKDARSHDIIKSIKAAYNG 121 Query: 121 MMFLPGDWRTTPEKDI-----------------KDLKSLSARQREILTMLAAGESNKEIG 163 + L T + K L+ L+ R+ ++ ++A G SNK+I Sbjct: 122 DILLDPAVTTKLIRAFNSISIDKQNSRIINKQKKKLELLTQREMDVAKLVAQGNSNKDIC 181 Query: 164 RALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNI 198 L ++ GTVK +L +++ +LE+ +RT+ A+ +N Sbjct: 182 HTLFLTEGTVKNYLTNIFEKLELSSRTELALFINQ 216 >UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=Gammaproteobacteria RepID=A5F1Q5_VIBC3 Length = 216 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 84/201 (41%), Gaps = 5/201 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++VM D + + G L+Q + AS E + ++ + +V++D Sbjct: 9 IRVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSMPIMN 68 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + P KVL+ N+ ++ +V+ + + ++ + A+ + G Sbjct: 69 GIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKTVHQG 128 Query: 121 MMFLPGDWRTTP-----EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKA 175 + +T LS R+ IL M+A G S+K+I LNIS TV+ Sbjct: 129 ATYFCESTTSTLFSQEILPVANKPNPLSRREEAILRMVAQGCSSKKIATLLNISYRTVET 188 Query: 176 HLESLYRRLEVKNRTQAAMML 196 H +++ +L++ + + A Sbjct: 189 HRQNIKHKLDIHSTAELAQYA 209 >UniRef50_A5URU4 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexi (class) RepID=A5URU4_ROSS1 Length = 242 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 45/217 (20%), Positives = 86/217 (39%), Gaps = 18/217 (8%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D +F G++ SL++ + A E + E +V++D + G Sbjct: 5 IRVLIIDDHPLFRQGIRWSLEEAGDMEVVGEAENGQEAIKLAERLVPDVVLVDINLPGLN 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + + P + +++ + + L + I A +D + A G Sbjct: 65 GLEVARVIKRREPRIGLIVISVYEDDDQLFQAIKVGAAAYSSKDVHPRDLVRMIREVARG 124 Query: 121 MMFLPGDWRTTP------------------EKDIKDLKSLSARQREILTMLAAGESNKEI 162 + P E+ L++R+ EIL +A G SNKEI Sbjct: 125 KYLINDSVIAKPHVATRVLHQFRELAATEDERTSALFAPLTSREIEILDCIARGLSNKEI 184 Query: 163 GRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 L+IS TVK H+ S+ +L+V +RT A + Sbjct: 185 ASQLSISGQTVKNHITSILSKLQVNDRTMAVIYAIQR 221 >UniRef50_D1BCA8 Two component transcriptional regulator, LuxR family n=18 Tax=Bacteria RepID=D1BCA8_SANKS Length = 234 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 39/200 (19%), Positives = 71/200 (35%), Gaps = 1/200 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++V+ D + G+ L + A + + +V+ D Sbjct: 29 VRVVVADDHPVVRAGIVGMLGVESDIEVVGEAEDGRQAVDLARTLSPDVVITDLRMPVLD 88 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ V V+V++ T + + + +D+ + AA G Sbjct: 89 GVGATREIVALPGTVRVVVLTTYETDGEILRAVEAGATGYLLKDTPRAELVAGIREAARG 148 Query: 121 MMFLPGDWRTTPEKDI-KDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLES 179 L T + L+ R+ E+L +A G SN +G L IS TVK HL Sbjct: 149 QTVLTPSVATRLVSQVGSRADRLTPREVEVLRAVARGLSNAAVGHELFISETTVKTHLIR 208 Query: 180 LYRRLEVKNRTQAAMMLNIS 199 + +L V +RT A + Sbjct: 209 AFGKLGVNDRTHAVTVATDR 228 >UniRef50_D1CF52 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=D1CF52_THET1 Length = 1648 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 44/205 (21%), Positives = 84/205 (40%), Gaps = 8/205 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++V+ D ++F G+K L+ + AS E + + + LV++D Sbjct: 1439 LRVVIADDHALFRDGIKSLLESE-GFQMVGEASNGQEAVELVHNLSPDLVLMDLSMPVMG 1497 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ P VKV++ + L E I +P++ E F + + G Sbjct: 1498 GLDAIRLISADKPSVKVIVLTASEEDKDLFEAIKAGAQGFIPKNLESEEFFQLLRNVIRG 1557 Query: 121 MMFLPGDWRTTPEKDIKD------LKSLSARQREILTMLAAGE-SNKEIGRALNISTGTV 173 + + L+ L+ R++EIL +L G S K++ R L +S TV Sbjct: 1558 EPAITPRLAGKLIDEFSRPVRSSSLQMLTDREQEILQLLVNGVTSTKDLSRQLGVSEHTV 1617 Query: 174 KAHLESLYRRLEVKNRTQAAMMLNI 198 K HL ++ +L +++R Q Sbjct: 1618 KYHLRNILSKLHLQSRAQVVAWAVQ 1642 >UniRef50_B9MPQ9 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=B9MPQ9_ANATD Length = 211 Score = 249 bits (638), Expect = 3e-65, Method: Composition-based stats. Identities = 49/202 (24%), Positives = 97/202 (48%), Gaps = 9/202 (4%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 ++++ D + G+KI L+ + + A E + LE +V++D Sbjct: 5 KVLIVDDNPAVLDGLKIILELE-NFEVVSLCTNAKEAIEFLEKKHADVVLMDIRMPVMDG 63 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 +FP VKV+I T C + ++++ + F + + S + ++ S G Sbjct: 64 IEGTFNIKTKFPNVKVIILTTFCEEDYIKKSLSFGADGYILKSSDAKHIVNSILSVLDGK 123 Query: 122 MFLPGDWR--------TTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 + + + T ++ ++ ++L+ R+ EI +++ G SNKEI R L IS GTV Sbjct: 124 VVMDKEIALYISDVLKRTSKQLLEKTQNLTERELEIAKLISQGYSNKEIARMLFISEGTV 183 Query: 174 KAHLESLYRRLEVKNRTQAAMM 195 + ++ S+ ++L +KNRTQ A+ Sbjct: 184 RNYITSILQKLNLKNRTQIAVY 205 >UniRef50_C5VAN3 Two component transcriptional regulator, LuxR family n=2 Tax=Corynebacterium matruchotii RepID=C5VAN3_9CORY Length = 215 Score = 249 bits (638), Expect = 3e-65, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 75/204 (36%), Gaps = 8/204 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++V+ D +++ G+ LQ I AS +E + +V +D G Sbjct: 5 IRVVIADDEALIRAGLATILQASGDIEVIGEASTGEEALTVAQRLQPDVVCMDIRMPGGD 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ P V++ T ++ + I+ +DS++ V AA+G Sbjct: 65 GLEATRRIQQLEPAPAVIVITTFDMDEYVFGALEAGACGILLKDSSMTDLVEGVRRAALG 124 Query: 121 MMFLPGDWRTTPEKDIKDLKS--------LSARQREILTMLAAGESNKEIGRALNISTGT 172 + + KS L+ R+ + + L G SN EI L + T Sbjct: 125 EGLVDASLTRRVIAEFTRRKSIFTSSSEVLTPRELDCVAQLCQGMSNNEIATTLFLEPST 184 Query: 173 VKAHLESLYRRLEVKNRTQAAMML 196 VK HL S + NR Q + Sbjct: 185 VKTHLSSAMAKTGTHNRVQLVIWA 208 >UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJD7_9MICO Length = 207 Score = 249 bits (637), Expect = 5e-65, Method: Composition-based stats. Identities = 43/201 (21%), Positives = 90/201 (44%), Gaps = 3/201 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++ + D + G++ L+ + A E +++ +V++D Sbjct: 2 IRVYLVDDHQLVRAGVRTLLESDPGLSVVGEARDGQEAVAGIDAAASDVVLMDLSMPVMD 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + P+ +VL+ + ++ ++EV+ + V +D+ AV++AA G Sbjct: 62 GVEATRAILSTHPDTRVLVLTSFSDRERVKEVLAAGAIGYVLKDAEPADLLAAVHAAARG 121 Query: 121 MMFLPGDWRTTPEKD---IKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHL 177 + + LS R+ ++L ++A G +NK++ RAL I+ TVKAHL Sbjct: 122 EVPIDPRVAGALLPSAGGPSVADRLSPRETQVLRLVAQGLANKQVARALGITERTVKAHL 181 Query: 178 ESLYRRLEVKNRTQAAMMLNI 198 ++R + V +RT AA+ Sbjct: 182 GRVFREIGVLDRTSAALWARD 202 >UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR family n=89 Tax=Bacteria RepID=C7Q6M6_CATAD Length = 225 Score = 248 bits (636), Expect = 6e-65, Method: Composition-based stats. Identities = 46/204 (22%), Positives = 89/204 (43%), Gaps = 8/204 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G++ L+ + A+ E ++ +++LD G Sbjct: 8 IRVLIADDHRMVRQGLRTFLELQEGIEVAGEAADGAECAERAAELEPDVILLDLVMPGVD 67 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ +VL+ + ++R + I V +D A AV S G Sbjct: 68 GVGAMELLREAGSTARVLVVTSFTDRRMIIPAIRAGARGYVYKDVDPAALAAAVRSVHAG 127 Query: 121 MMFLPGDWRTTP--------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 + L + T +L+AR+RE+L ++A G +N+EI RAL ++ T Sbjct: 128 HVLLEPEVATALLDSGSNGAADQGPQAPALTAREREVLVLIAQGRANREIARALVLAEKT 187 Query: 173 VKAHLESLYRRLEVKNRTQAAMML 196 VK H+ ++ +L V +RTQAA+ Sbjct: 188 VKTHVSNILMKLGVADRTQAALWA 211 >UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 Tax=Bacteria RepID=Q3Z8L1_DEHE1 Length = 224 Score = 248 bits (636), Expect = 6e-65, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 85/205 (41%), Gaps = 10/205 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D I G + +Q+ + + AS E + +V++D Sbjct: 7 IKVLLADDHVIVREGTRELIQRESGMMVVGEASDGVEAVEMSMKVHPDVVVMDIAMPRLN 66 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ P +LI +++++ ++ + + ++ A+ + G Sbjct: 67 GIEATKQIKQLLPTTAILILTAYESEQYILAILEAGAASFLLKNVKGTQLLEAIRAVYAG 126 Query: 121 MMFLPGDWRTTP----------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIST 170 L +++ + L+ R+ E+L M A G SNK+I L +S Sbjct: 127 ESVLQPSTTRRVIDQLINKATKTEEVSAVNPLTDREIEVLKMAARGVSNKDIADQLYLSN 186 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMM 195 T++ HL +++++L V +RT+A + Sbjct: 187 RTIQTHLSNIFKKLSVGSRTEAILY 211 >UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=Q2RMH6_MOOTA Length = 221 Score = 248 bits (636), Expect = 6e-65, Method: Composition-based stats. Identities = 39/208 (18%), Positives = 83/208 (39%), Gaps = 12/208 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQD-GE 59 +++++ D ++ G++ L++ + A + E +V++D G Sbjct: 3 IRVMLVDDHALVREGLRALLEREGDIEVVGETGSAAGVLALAEESRPEVVVMDLQLGAGR 62 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 ++ V + PE+KV+I + ++ + + V + + +E A+ A Sbjct: 63 NGVEATRELVEKKPEIKVVILSMYDDEELVFRALESGARGYVLKRAGIEELTTAIRLVAR 122 Query: 120 GMMFLPGDWRTTP-----------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNI 168 G +L + L+ R+ E+L + A G +N EI R L I Sbjct: 123 GEAYLDPQIARRVIEGLQERLPFTRASRPEGPELTERELEVLRLAAEGLTNAEIARRLVI 182 Query: 169 STGTVKAHLESLYRRLEVKNRTQAAMML 196 S TV+AH ++ ++L + +R Sbjct: 183 SVKTVQAHRANIMQKLGLHDRVDLVKYA 210 >UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0L7_PELTS Length = 223 Score = 248 bits (636), Expect = 6e-65, Method: Composition-based stats. Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 11/206 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +Q+++ D + +++ + + AS +E + + ++++D + Sbjct: 9 IQLLLVDDDPLVRRSLRMLFELH-DINVVGEASNGEEALKAIARLKPTMILMDVNMPKMD 67 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L+ +P+++V+I + + I A V +DS E V S A G Sbjct: 68 GIQALKAIKTNYPDIQVIILTVHNQHEKVVQAIRDGCSAYVLKDSPPEQLIEVVESVAEG 127 Query: 121 MMFLPGDWRTTP----------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIST 170 F+ + K+L L+ R++E+L ++ G SNKEI LNI+ Sbjct: 128 RYFVDTSIANELLVNLVQGTPRRQHPKNLPLLTLREKEVLQLIVNGLSNKEIAGKLNITL 187 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 TVKAH+ S+ +L V +RTQAA++ Sbjct: 188 RTVKAHVSSILMKLNVNDRTQAAVLA 213 >UniRef50_C4DCK3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=3 Tax=Actinomycetales RepID=C4DCK3_9ACTO Length = 214 Score = 248 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 40/208 (19%), Positives = 80/208 (38%), Gaps = 9/208 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D Q + G+++ + + A + LV++D G Sbjct: 2 IRVLLVDDQRLIRAGLRMLCEPAADIEVVGEADGGQAAVRLAGELCPDLVLMDLRMPGMD 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 Q+ + + P +V+ T + L + + +D++ A+ AA G Sbjct: 62 GITATQRILAERPSTRVVALTTFDDDDHLYPALAAGACGFLVKDTSPNELLEAIRKAADG 121 Query: 121 MMFLPG---------DWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTG 171 R L L+ R+RE+L ++ AG +N +I L++ Sbjct: 122 DTPFSAGVVKRIVDSAVRARASVPTATLPKLTTREREVLALVGAGYANVDIAERLHLGVT 181 Query: 172 TVKAHLESLYRRLEVKNRTQAAMMLNIS 199 TVK H+ SL + NR + A++ S Sbjct: 182 TVKTHIASLMTKTGCSNRVRLAVLAVRS 209 >UniRef50_A4FAA4 Two component system response regulator n=2 Tax=Actinomycetales RepID=A4FAA4_SACEN Length = 218 Score = 248 bits (635), Expect = 7e-65, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 79/210 (37%), Gaps = 12/210 (5%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 +I++ + + I G++ L+ I A E + + +V++D Sbjct: 3 RILLAEDEQIVRAGLRKILESAGDLTVIAEAGDGAEAVTGVRRHAPDVVVMDIQMPRLDG 62 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 ++ K+LI + I + +D+ E A+ A G Sbjct: 63 LAATRQITSLPAPPKILILTMFDFDANVYSAIEAGASGFLLKDARPEELINAIRVIADGD 122 Query: 122 MFLPGDWRTTP------------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIS 169 L ++ L L+ R+R+IL+++ G SN I + L + Sbjct: 123 AMLSPSVTRRLLSHFADRNSPRGPTAVRGLDELTPRERQILSLVGGGLSNASIAKTLGAT 182 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 TVK H+ L +L+ +NR Q A++ + + Sbjct: 183 ESTVKGHVSRLLMKLDCENRVQLALIAHNA 212 >UniRef50_C5C7H0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=9 Tax=Bacteria RepID=C5C7H0_MICLC Length = 230 Score = 248 bits (635), Expect = 8e-65, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 82/217 (37%), Gaps = 18/217 (8%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++ + D Q++ G+ + + + + A E + +V++D Sbjct: 9 VRVALVDDQALIRSGLAMLVDSQPDLTVVAEAGSGREAVASVSVAGADVVLMDVRMPEMD 68 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + + +V++ T + + I + +D+ E A+ + G Sbjct: 69 GIEATRALLRRPDAPRVVVLTTFDLDEYAFDAIEAGASGFLLKDAPPEELLAAIRTVHRG 128 Query: 121 MMFLPGDWRTTPEKDIKD------------------LKSLSARQREILTMLAAGESNKEI 162 + + + SL+ R+RE+L ++A G +N EI Sbjct: 129 DAVIAPSTTRRLLTHMAPRLRSDQVRSAECEEQQAAVASLTPREREVLVLMAQGAANLEI 188 Query: 163 GRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 L +S TVK H+ + +L ++R QA ++ + + Sbjct: 189 AAELVLSEATVKTHVGRVLAKLGARDRVQAVLIAHRA 225 >UniRef50_B1ZU87 Two component transcriptional regulator, LuxR family n=4 Tax=Verrucomicrobia RepID=B1ZU87_OPITP Length = 212 Score = 248 bits (635), Expect = 8e-65, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 85/199 (42%), Gaps = 2/199 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D + G+ + + E + ++ +V+LD G Sbjct: 10 IRILLVDDHMVMRMGLVTATSDEPDMEVVADVENGAEAIEAYRAHRPDVVVLDLRMHGMS 69 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ +F V+VL+ + + + + V ++ +E A+ G Sbjct: 70 GVDAIRALRSEFGNVRVLVYSNYAAGEEVYQALKAGASGFVVKEMALERLLEAIRKVHAG 129 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 ++P + + + + LS R+ ++L ++A G SNKEI L++ GT K H+ ++ Sbjct: 130 EQYVPPEIAMRMGERL--MAQLSPRELDVLKLVAKGRSNKEIAAELHVVEGTAKIHVANI 187 Query: 181 YRRLEVKNRTQAAMMLNIS 199 +L V +RTQA ++ Sbjct: 188 LTKLGVSDRTQAIVVAVRR 206 >UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC6_SOLUE Length = 216 Score = 248 bits (635), Expect = 8e-65, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 87/206 (42%), Gaps = 10/206 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D ++ G+++ L+ I A+ + + +V++D G Sbjct: 4 IRILLADDHTVVRKGLRLLLESHPGFQVIGDAADGRDAVSLAGEHTPDVVVMDVAMPGLN 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ + P ++ + ++ ++ + + A + +DS AV + + G Sbjct: 64 GIEAARQISAKLPHTAIVFLSMHSDESYVLKALKAGARAYLLKDSAEHDLIAAVIAVSEG 123 Query: 121 MMFLPGDWRTTPEKD----------IKDLKSLSARQREILTMLAAGESNKEIGRALNIST 170 F +D + L+ R+RE+L +LA G++NKE+ LN+S Sbjct: 124 KAFFSPAISKMLVEDYMRQMQERQIEDSYELLTTREREVLQLLAEGKNNKEVAAILNLSL 183 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 TV+ H ++ ++L + + + + Sbjct: 184 YTVETHRGNILQKLNLHSGAELILYA 209 >UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphylococcaceae RepID=B9E7V9_MACCJ Length = 210 Score = 248 bits (635), Expect = 9e-65, Method: Composition-based stats. Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 4/199 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYP-EALVMLDGDQDGE 59 M I++ D I GMK L I + EL + L+ L+++D Sbjct: 4 MDIILVDDHHIVRQGMKFLLSTEASFNVIADFNNGRELLEHLDETQLPDLIIMDLVMPEL 63 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 ++ ++P+VKVL+ ++ ++ + V+ +DS + + A Sbjct: 64 NGIEATRRIKAKYPDVKVLVLSSFIDEEHVLGVMDAGADGYEMKDSEPKALINTIKQIAA 123 Query: 120 GMMFLPGD---WRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAH 176 G D R + LS R+ E+L ++ G +NKEI L +S TVK H Sbjct: 124 GEQIFHPDVMKVRKSGMNLAHLRNPLSKRELEVLKAMSEGLTNKEIAEKLFVSEKTVKTH 183 Query: 177 LESLYRRLEVKNRTQAAMM 195 + ++ +LEV +RTQA+M Sbjct: 184 VSHIFAKLEVGDRTQASMY 202 >UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QSJ5_9RHOB Length = 212 Score = 248 bits (634), Expect = 9e-65, Method: Composition-based stats. Identities = 42/203 (20%), Positives = 87/203 (42%), Gaps = 5/203 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D ++ G++ L + + A+ E + ++++D Sbjct: 5 IRVLLADDHALVRDGIRARLNKVPEIEVVGEATNGREAVKLAHELRPDVLLMDVSMPVMN 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + FPE+ VLI + N +++ V+ + +D + A++S A G Sbjct: 65 GLEAAAEVRKSFPEIAVLILSIYDNSEYVRGVVQAGARGYILKDISAPEMITAISSVASG 124 Query: 121 MMFLPGDWRTTP-----EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKA 175 + T I+D L+ R+R++LT +A G NKE+ ++L IS TV++ Sbjct: 125 GYYFSSAVGPTLVGTATSAPIEDPYGLTDRERQVLTAIAKGLPNKEVAKSLGISVRTVES 184 Query: 176 HLESLYRRLEVKNRTQAAMMLNI 198 H +L ++ KN Q + Sbjct: 185 HRLNLREKVGNKNAAQLYKVAQD 207 >UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR family n=2 Tax=Frankia sp. EAN1pec RepID=A8L9Z7_FRASN Length = 218 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 78/206 (37%), Gaps = 7/206 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + + G+ + + A+ ++ + +V++D + G Sbjct: 8 IRVLLADDHRLVLDGLSALIDSVDGLTVVGEATSGEQAVDLAGTEHPDVVLMDIEMPGIG 67 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ P + V++ ++ + + + + + + + A G Sbjct: 68 GVEATRRITTAQPTIAVVMLTMYGEDEFVFAALRAGARGYLLKGAQQKDVVRTIGAVARG 127 Query: 121 MMFLPGDWRTT-------PEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 D P + L+ R+RE+L++LA G N I R L ++ TV Sbjct: 128 DAVFGPDVAHRVLRTFTSPPAENAPFPELTEREREVLSLLANGWPNSRIARHLQLTPKTV 187 Query: 174 KAHLESLYRRLEVKNRTQAAMMLNIS 199 ++ ++ +L +RT A + + Sbjct: 188 ANNVSNILAKLHAPDRTAAILRARRA 213 >UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 Tax=Dehalococcoides RepID=D2BGT0_DEHSV Length = 232 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 79/203 (38%), Gaps = 10/203 (4%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 ++++ D ++ GM L Q + A E + + +V++D Sbjct: 5 KVLIADDHAVLREGMSRLLSQEKDIEVVGEAGDGQEAVDMVAQFKPDVVLMDIVMPRLTG 64 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 + P +LI + R++ ++ + + + + A+ + G Sbjct: 65 VEATKLIKKNNPSTCILILTAYSDIRYILGLLEAGASGYLLKSAKSDEIVGAIRAIKAGE 124 Query: 122 MFLPGDWRTTPEKDIKDLK----------SLSARQREILTMLAAGESNKEIGRALNISTG 171 L + + ++ LS R+ EIL + + G SN+EI L +S Sbjct: 125 SVLDSIATRKLLERVVNVSKESDEDKVRGQLSPREVEILQLASKGLSNREIADKLTLSMR 184 Query: 172 TVKAHLESLYRRLEVKNRTQAAM 194 TVKAHL +++ ++ RT+A + Sbjct: 185 TVKAHLSNIFNKMRCSCRTEAIV 207 >UniRef50_C7MLQ9 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=29 Tax=Actinobacteria (class) RepID=C7MLQ9_CRYCD Length = 261 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 84/210 (40%), Gaps = 13/210 (6%) Query: 3 IVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCY 62 +++ D Q + +G K+ L + AS E +++ + +V++D E Sbjct: 45 VLIVDDQDLVRNGFKLILSSYDHVRVVGEASNGIEAYEQSLALRPQVVLMDIRMPVEDGI 104 Query: 63 WLLQKTV--VQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +K V + +VL+ T ++ + + + +D+ + AV + A G Sbjct: 105 AATRKIVGDTALAQTRVLVLTTFDIDEYVYDALQAGASGFMLKDAEPDDIVRAVRTVAAG 164 Query: 121 MMFLPGDWRTTPEK-----------DIKDLKSLSARQREILTMLAAGESNKEIGRALNIS 169 + + L L+ R+REIL +A G SN+EI L IS Sbjct: 165 DALIQPSITRRLIETFVSSRPRTSAAAGGLVDLTDREREILRFVARGMSNEEIADDLVIS 224 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 TVK HL + +L+ +R Q + S Sbjct: 225 PATVKTHLARIMGKLDAHDRAQLVVAAYES 254 >UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria RepID=Q3Z7M1_DEHE1 Length = 232 Score = 247 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 10/209 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + IV+ D I HG+K L+ + AS E +ES +++ D G Sbjct: 2 ISIVLADDHQIVRHGLKALLEAEADFEVVGEASDGIEAVNLVESLQPGVLVTDLMMGGMS 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + V + P+ V+I + N+ ++ E + A V +DST E +V A G Sbjct: 62 GIEVTYQVVKRSPKTAVVILSMYGNEAYVHEALRAGARAYVLKDSTSEELVRSVREAVQG 121 Query: 121 MMFLPGDWRTTPEKD----------IKDLKSLSARQREILTMLAAGESNKEIGRALNIST 170 +L + + ++L+ R+RE+L ++A G + EI L IS Sbjct: 122 HRYLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAERLFISP 181 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 TV+ H ++ R+L+++N+TQ Sbjct: 182 RTVEVHRANMMRKLDLRNQTQLLRYALQR 210 >UniRef50_C7NKN7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=138 Tax=Bacteria RepID=C7NKN7_KYTSD Length = 244 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 78/221 (35%), Gaps = 24/221 (10%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 +I + D QS+ G ++ L + + A +L++ +V++D Sbjct: 4 RIFLVDDQSLVRAGFRMVLDAQPDMSVVGEAPDGQSAVDQLKTIAADVVLMDIRMPRLDG 63 Query: 62 YWLLQKT--VVQFP---EVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS 116 + + P E KV++ T + + + +D+ E A+ + Sbjct: 64 IEATRVLLGRDKHPGGAEPKVVVLTTFDMDEYAYAALEAGASGFLLKDAGPEELLAAIRA 123 Query: 117 AAMGMMFLPGDWRTTPEKDIKD-------------------LKSLSARQREILTMLAAGE 157 A G + + + L+ R+ E+ +AAG Sbjct: 124 VASGDAVVAPSTTKRLLERFVPTLTPEVADVASPAEQQEYLREVLTEREYEVFEAVAAGL 183 Query: 158 SNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNI 198 SN EI + L ++ T+K H+ L +L ++R Q + Sbjct: 184 SNTEIAKELFVAEATIKTHIGRLLFKLGCRDRVQLVITAYE 224 >UniRef50_D1B9T1 Two component transcriptional regulator, LuxR family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9T1_THEAS Length = 227 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 83/203 (40%), Gaps = 7/203 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++IV+ D +F G++ L+ I A D + + + +++ D + Sbjct: 4 IRIVLADDHRLFRDGLRRLLEMEKDMEVIGEAEDGDATVEMVSALKPDVLLFDIHMPKKD 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +++ + + + + + + A V + S + A+ S G Sbjct: 64 GIQVVKDLKAMGCSPRFVAITAFDDDDHITALSSVGIDAYVLKASGMAELLSAIRSVYRG 123 Query: 121 MMFLPGDWR-------TTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 ++ ++ L L+ R+ E+L ++ G +N EI R + +S TV Sbjct: 124 HSYVDPKVAGKLLSTFNRRREERDLLSRLTPREMEVLYWISQGLNNGEIARKMVLSEKTV 183 Query: 174 KAHLESLYRRLEVKNRTQAAMML 196 K H+ + ++L++ +RTQAA+ Sbjct: 184 KNHVSHILKKLDLVDRTQAAVFA 206 >UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0B0G6_SYNWW Length = 213 Score = 246 bits (631), Expect = 2e-64, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 84/201 (41%), Gaps = 7/201 (3%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 ++V+ D + G++ L+ I ++++D + G Sbjct: 5 RVVIADDHVLVREGLRKLLELDSNIKVIDEVGDGQGAINIARKEKPDIIIMDVNMPGTDG 64 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 + + P V+++ + + +++ A + +D ++ G Sbjct: 65 IVATRVIKRELPSVRIIALTVYEGEE-VVDMVKAGASAYILKDVAGSELVDTIHRVMNGE 123 Query: 122 MFLPGDWRTTPEKDIKDLK------SLSARQREILTMLAAGESNKEIGRALNISTGTVKA 175 + + ++++ + L+ R++++LT+L G +NKE+ + IS TVK Sbjct: 124 VVIYPRVANRLVRELRQSENRKSEIRLTKREKDVLTLLVKGNTNKEMAEVMFISEKTVKN 183 Query: 176 HLESLYRRLEVKNRTQAAMML 196 HL S++R+L VK+RT AA+ Sbjct: 184 HLTSIFRKLGVKDRTHAAIYA 204 >UniRef50_C3JVF4 Two component transcriptional regulator, LuxR family n=2 Tax=Rhodococcus erythropolis RepID=C3JVF4_RHOER Length = 220 Score = 246 bits (631), Expect = 2e-64, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 90/211 (42%), Gaps = 13/211 (6%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + +++ D Q + G ++ L + A E ++++ + +V++D Sbjct: 2 IDVLIADDQQVVRQGFELFLSGHPEIRVVGHAKTGVEAYEQVRALRPDVVLMDIRMPHGD 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ + +FP +V++ T ++ E + + +D+ E + AV + A G Sbjct: 62 GLTATREVLAEFPGTRVIVITTFDLDEYVFEALDSGAAGFLLKDADPEELSSAVLTVAEG 121 Query: 121 MMFLPGDWRTTPEKDIKDLKS-------------LSARQREILTMLAAGESNKEIGRALN 167 L + + K LSAR+ +++ +L+ G N +I +L+ Sbjct: 122 GSVLSPRLTSRLIVEFARRKPAPMSTARSGSDHGLSAREMDVVQLLSQGLGNNDIADSLS 181 Query: 168 ISTGTVKAHLESLYRRLEVKNRTQAAMMLNI 198 + TVK+H+ ++ ++L+V+ R Q + Sbjct: 182 LEQSTVKSHISNICKKLQVRTRVQIVIWAYR 212 >UniRef50_A6TUG7 Two component transcriptional regulator, LuxR family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TUG7_ALKMQ Length = 201 Score = 246 bits (631), Expect = 2e-64, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 88/196 (44%), Gaps = 1/196 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 M+I++ D + +++ L + + A+ E +V++D Sbjct: 1 MKILIVDDDQLVCQSLQVLLSREQDMDVMATANNGAEAITCCRDILPDVVLMDIQMPVMD 60 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ ++P++++++ T +++ ++ I + + + V + A + G Sbjct: 61 GIQATREIKKEWPQIRIMMLTTFQDEQNIRLAISAGAEGYLIKSTEVSSMAQQLRVLFSG 120 Query: 121 MMFLPGDWRTTPEKDIKD-LKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLES 179 L D + + + L+ R+R+I+ ++ G SN+EI L IS GTV+ L Sbjct: 121 TSVLDADVLKRLMQPQRKGFEELTPRERDIVELVVQGLSNREIAEQLYISEGTVRNTLSI 180 Query: 180 LYRRLEVKNRTQAAMM 195 + +L+V++RTQ A+ Sbjct: 181 ILEKLQVRDRTQLAIY 196 >UniRef50_C1TL62 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL62_9BACT Length = 217 Score = 246 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 7/203 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++V+ D +F GMK L+ AS E ++ +V+LD Sbjct: 4 IRMVLIDDHKLFRDGMKKLLEMEPDFSLEGEASDGIEGLALIKRSRPDVVLLDIGMPNLD 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L+++ K + ++R L E+ V V + S A+ S A G Sbjct: 64 GIGLIRELRSTEQNTKFVAITAFNDERKLSELSSVGVHGFVLKSSGRTELLSAIRSVARG 123 Query: 121 MMFLPGDWRTTP-------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 ++ + + L L+ R++E+L LA G SN EI +N+S TV Sbjct: 124 QCYVDPKVAGLLLGAFHKKQDEADMLCDLTDREKEVLFWLAQGLSNLEISAKMNLSEKTV 183 Query: 174 KAHLESLYRRLEVKNRTQAAMML 196 K H+ + ++L++++RTQAA++ Sbjct: 184 KNHVSHILKKLDLRDRTQAAILA 206 >UniRef50_B8FDP3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDP3_DESAA Length = 219 Score = 246 bits (630), Expect = 3e-64, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 81/197 (41%), Gaps = 9/197 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ + ++ G+K + R + A + L++LD Sbjct: 6 IKILITEDHALVRKGLKSLISSRSEFQVVGEADNGLAAIEMTRKCKPDLILLDLSMPKMN 65 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +++ + PEVK+L+ ++ +L + + + + +A+ + G Sbjct: 66 GLATMRQLKKERPEVKILVITMHASQDYLIPALKEGADGYLLKGDDPQELFMAIRAIMDG 125 Query: 121 MMFLPGDWRTTP---------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTG 171 +L D + L SL+ R++E+ ++A G +N++I L IS Sbjct: 126 KAYLSSDLSGQLIHSVINPDTREAADPLASLTQREKEVFQLVAEGNTNQQIADLLFISPK 185 Query: 172 TVKAHLESLYRRLEVKN 188 TV H +L ++L++ + Sbjct: 186 TVDKHRTNLMKKLDLHS 202 >UniRef50_D1BGN7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=4 Tax=Actinomycetales RepID=D1BGN7_SANKS Length = 258 Score = 246 bits (630), Expect = 3e-64, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 89/212 (41%), Gaps = 14/212 (6%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D Q +F G+ + + + + A+ E + ++ +V++D Sbjct: 34 IRVLLVDDQELFRSGIAVIVDAQDGLEVVGQAADGSEAVRMVDDLSPDVVLMDVRMPELD 93 Query: 61 CYWLLQKT------VVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAV 114 ++ + V+V++ T I + + +D+T A+ Sbjct: 94 GVEATRQIFAPARAASRAGPVRVIVLTTFDLDDRAAAAIRYGASGFLLKDATPAMLRDAI 153 Query: 115 NSAAMGMMFLPGDWRTTP--------EKDIKDLKSLSARQREILTMLAAGESNKEIGRAL 166 + G L D +T L+ L+ ++RE+L +AAG +N EI R Sbjct: 154 RTVHAGNAVLAPDDLSTLLDGRFRARRPSPPGLEDLTPKEREVLAAVAAGLNNAEIARRA 213 Query: 167 NISTGTVKAHLESLYRRLEVKNRTQAAMMLNI 198 +S TVK H+ ++ R+L +++R Q ++ + Sbjct: 214 FVSESTVKTHVGAVLRKLGLRDRVQVVVLAHE 245 >UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3 Tax=Proteobacteria RepID=Q313W8_DESDG Length = 223 Score = 246 bits (630), Expect = 3e-64, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 81/207 (39%), Gaps = 10/207 (4%) Query: 3 IVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCY 62 +++ + ++ G+K LQ + AS + LV++D Sbjct: 7 LIIAEDHTLLREGLKSLLQSVPHLIVTGEASDGQMAVDLCDRNQPELVLMDISMPRMDGV 66 Query: 63 WLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMM 122 + + PEV+VL+ ++ + V +D++ + F LAV S G + Sbjct: 67 QATRLIKKRHPEVRVLVLTVHGAGEYVYAALAAGADGYVLKDASNDEFILAVESVLGGKI 126 Query: 123 FLPGDWR----------TTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 +L + ++L+ R++EI ++A G N+EI L +S T Sbjct: 127 YLSPGVSDAVVKGYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREIAEMLVVSVKT 186 Query: 173 VKAHLESLYRRLEVKNRTQAAMMLNIS 199 V+ H +L ++L V + + + Sbjct: 187 VEKHRSNLMQKLGVHSAAELRALALER 213 >UniRef50_C0GHS5 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHS5_9FIRM Length = 219 Score = 246 bits (629), Expect = 4e-64, Method: Composition-based stats. Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 6/206 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I + D + G++ + + A+ +E Q + +V+LD G Sbjct: 4 IKIFIVDDHEVVRLGLQGLFARYEELEIVGEAASGEEAVQVVPVIKPDVVLLDVRLQGIH 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + P +KV++ ++ +Q A V ++ T A+ + G Sbjct: 64 GADTCRLITSAVPGIKVVMLSSFAEPEEVQAAFTAGASAYVLKNITSGNVIKAIKAVMQG 123 Query: 121 MMFLPGDWRTTP------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVK 174 F+ + EK + LS R+ EIL ++ G++NKEIGR L +S TV+ Sbjct: 124 ESFIDPEITEQVMSLIRGEKAASQISGLSKREEEILHLVGEGKTNKEIGRELFLSEKTVR 183 Query: 175 AHLESLYRRLEVKNRTQAAMMLNISS 200 H+ + +L V NR+QAA + S Sbjct: 184 NHVSRILDKLGVSNRSQAAAFMARRS 209 >UniRef50_B1L0K3 DNA-binding response regulator, LuxR family n=22 Tax=Bacteria RepID=B1L0K3_CLOBM Length = 217 Score = 246 bits (629), Expect = 4e-64, Method: Composition-based stats. Identities = 46/206 (22%), Positives = 89/206 (43%), Gaps = 11/206 (5%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 I++ D + + G+KI L + A E + +V++D Sbjct: 5 NIIVVDDEKLIREGLKIILSTYNDIEVVGLAGDGREALSLCKEKDVQVVLMDIRMPNCDG 64 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 + QFP +K+LI T +K ++ E + F + +DS+ E + + G Sbjct: 65 VLGTRIIKEQFPHIKILILTTFNDKEYIHEALKFGASGYLLKDSSNELIYEGIKACVKGN 124 Query: 122 MFLPGDWR-----------TTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIST 170 + + D + DI +L+ R+ I+ +A G SNKEI + +S Sbjct: 125 VVVHPDVANNIILNTTYEKELNDDDINLKYNLTEREINIIRQIANGLSNKEIAEKIYLSE 184 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 GT+K ++ ++ +L++++RTQ A+ Sbjct: 185 GTIKNNISTILSKLDLRDRTQIAIFA 210 >UniRef50_UPI000050F8A6 two component transcriptional regulator, LuxR family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F8A6 Length = 222 Score = 246 bits (629), Expect = 4e-64, Method: Composition-based stats. Identities = 46/219 (21%), Positives = 88/219 (40%), Gaps = 20/219 (9%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D +S+ G+++ L I A+ E + L+++D Sbjct: 3 IRVIIADDESLMRSGLRLLLGAADDIDIIAEAANGAEAIELARELSPDLILMDIRMPVMD 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + Q +VLI ++ + + + +D+ E AV +AA G Sbjct: 63 GLEATRALMAQTLHPEVLILTAFGTDEFVLQALRSGAAGYILKDTPPEDLIHAVRAAANG 122 Query: 121 MMFLPGDWRTTPEKD--------------------IKDLKSLSARQREILTMLAAGESNK 160 L + L+ L+ R+REI +A G +N Sbjct: 123 TRTLSPSAVESLLGRDTTSATGVAGASNWNSVPIGPDPLEPLTTREREIAEAVAQGMTNA 182 Query: 161 EIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 ++ RAL +ST TVK HL ++ +L+V R Q A+++N Sbjct: 183 QVARALFVSTATVKTHLARIFYKLDVSTRVQLALLVNER 221 >UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 Tax=Bacillales RepID=C0Z7M8_BREBN Length = 602 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 82/211 (38%), Gaps = 18/211 (8%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++V+ D S ++ L+ + + A + + E LV++D + Sbjct: 383 IRLVIVDDHSFIRESLRSILEGQRDLRVVGLAEDGAQAVELCEELEPDLVLMDLEMPNMD 442 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ ++P +++L+ +T + +E++ + + A + G Sbjct: 443 GITATKRIKEKWPGIRILVLSTFQDTEKAKEIMRSGADGYLLKSIESRELAETIRLVHRG 502 Query: 121 MMFLPGD------------------WRTTPEKDIKDLKSLSARQREILTMLAAGESNKEI 162 + D + ++ L+ R++EIL MLA G K I Sbjct: 503 GTMIAQDLFHKMLDGQPVNGQEDLLVAPKQSEKDENAYGLTKREQEILQMLAQGMRYKTI 562 Query: 163 GRALNISTGTVKAHLESLYRRLEVKNRTQAA 193 L +S GTV+ + +LY +L V+NR A Sbjct: 563 ASKLYLSDGTVRNYASALYDKLGVRNRDDAV 593 >UniRef50_D2SFS4 Two component transcriptional regulator, LuxR family n=2 Tax=Frankineae RepID=D2SFS4_9ACTO Length = 220 Score = 245 bits (628), Expect = 5e-64, Method: Composition-based stats. Identities = 43/200 (21%), Positives = 89/200 (44%), Gaps = 3/200 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + +++ D ++ G+ + + A+ E +++ +V++D Sbjct: 2 IDVLVVDDHALMRTGLSGLIAAAGDMRVVGTAADGAEAVEEVARLAPHVVLMDLSMPVLD 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ V + P V+VL+ + +++ + E + V +D+ A+ S A G Sbjct: 62 GVAATRRIVEEHPSVEVLVLTSFSDRQRVIEALDAGAGGYVLKDTEPADLLAAIRSTARG 121 Query: 121 MMFLPGDWRTTPEKDIK---DLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHL 177 L T + L+ R++E+L ++ G +NK+I R L I TVKAHL Sbjct: 122 HSPLDPRVARTVLHARRSPVRAAELTEREQEVLALVGHGLANKQIARRLGIRESTVKAHL 181 Query: 178 ESLYRRLEVKNRTQAAMMLN 197 S+++R+ V++RT A + Sbjct: 182 TSVFQRIGVRDRTSATLWAR 201 >UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexaceae RepID=A9WKI8_CHLAA Length = 209 Score = 245 bits (628), Expect = 6e-64, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 86/199 (43%), Gaps = 3/199 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDG-E 59 +++ + D SI G+ L + V + A+ + Q ++ ++++D G Sbjct: 4 IRVALVDDHSIVRRGLSAYLAAQPDIVVVGEAANGESALQMASTWQADVIVMDVLMPGGI 63 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 ++ P ++I + + + + + + ++S E A+ A Sbjct: 64 DGIETTRQLKRLIPHTHIIILSGYADDARVIGALRAGAITYIEKESQPEQLLEAIRGAMA 123 Query: 120 GMMFLPGDWRTTPEKD--IKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHL 177 G L + K +L+ R+RE+L ++A G +N EI L +S TVK H+ Sbjct: 124 GKAVLAPALMQRILEAQTSKAADTLTEREREVLKLVAEGLTNAEIASRLTVSEETVKTHV 183 Query: 178 ESLYRRLEVKNRTQAAMML 196 S+ R+L + +RTQAA+ Sbjct: 184 ASILRKLGLAHRTQAAIYA 202 >UniRef50_UPI0001789C57 two component transcriptional regulator, LuxR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C57 Length = 225 Score = 245 bits (627), Expect = 6e-64, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 80/212 (37%), Gaps = 16/212 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++IV+ D Q G++ L + I A +E +V++D G Sbjct: 7 IRIVLADDQPFIRKGLRYILDIQKDMQVIGEAMTGEEAVDITLRNVPDIVLMDIRMPGGT 66 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + P KV++ T ++++ + I + +D+ + + + G Sbjct: 67 GIMATKSIAEALPNTKVVLLTTFDVEQYVFDGIRAGASGYLLKDTETDELLSGIRAMHRG 126 Query: 121 MMFLPGDWRTTPEKDI----------------KDLKSLSARQREILTMLAAGESNKEIGR 164 I + L +L+ R+ E+L +LA G+ N EI Sbjct: 127 ATLFNSSTAKRALDQILTSGMQEPDSDSPGKDRLLGALTERETEVLQLLAYGKRNHEISA 186 Query: 165 ALNISTGTVKAHLESLYRRLEVKNRTQAAMML 196 L IS GT K H+ + ++L +RTQA + Sbjct: 187 ILCISEGTTKTHIHHIMQKLGALDRTQAVVTA 218 >UniRef50_B4D2I0 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2I0_9BACT Length = 209 Score = 245 bits (627), Expect = 6e-64, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 79/199 (39%), Gaps = 1/199 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G+ SL+ + A E + + + +LD Sbjct: 6 IRLMLADDHFMVRMGLATSLKLEPDFEIVAEADTGKEAISFYQHHRPDVALLDCRLPDMT 65 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + Q ++LI + + + + + + +++ A+ + G Sbjct: 66 GIEVTQALRAADATARILILSAFNGEEDVFRAVQAGAESYLLKNARRTEIVTAIRTVHAG 125 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 + P + ++ + L+ R++ +L + G SNKEIG L I+ VK H+ L Sbjct: 126 SPYFPPEISAILAARMRR-EELTPREKSVLFEIVKGSSNKEIGCCLEITESAVKIHVTHL 184 Query: 181 YRRLEVKNRTQAAMMLNIS 199 ++L K+RT AA + Sbjct: 185 LQKLNAKDRTHAATIAIQR 203 >UniRef50_C4RJG1 Two-component system response regulator receiver n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RJG1_9ACTO Length = 264 Score = 245 bits (627), Expect = 6e-64, Method: Composition-based stats. Identities = 41/207 (19%), Positives = 87/207 (42%), Gaps = 8/207 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G++ L+ I A+ E + + +V +D Sbjct: 54 IRVLIVDDHPVVRRGLRTMLEGESWVDGIAEAATCAEAVSSVVADRVGVVAMDVALPDGD 113 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ ++ PE +VL+ ++ + + V +D+ + A+ + A G Sbjct: 114 GVEATRRILLSRPETRVLMLTMADDEDVVNRSLRAGARGYVLKDTDPDVIIDALRTVAGG 173 Query: 121 MMFLPGDW--------RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 + L + P + L+ R+R+IL LA GE+N I R +S T Sbjct: 174 GLVLGPRVGPQVLTTLQRQPVELPPPFDRLTPRERDILRHLATGETNARIARRFGLSEKT 233 Query: 173 VKAHLESLYRRLEVKNRTQAAMMLNIS 199 V+ L +++ +L V +R QAA++ + Sbjct: 234 VRNQLSAVFAKLGVTDRVQAALLARDA 260 >UniRef50_C1A730 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A730_GEMAT Length = 209 Score = 245 bits (627), Expect = 7e-64, Method: Composition-based stats. Identities = 43/195 (22%), Positives = 79/195 (40%), Gaps = 1/195 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D +I G+ L I A + +V+ D Sbjct: 6 IRILLVDDHAILREGLAALLNGVDGMQVIGQAGDGATAIDLYRNLLPDVVICDLRMVPMD 65 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + +FP +V++ T + + + + +D V++ G Sbjct: 66 GTEVTSTIRAEFPAARVILLTTYDTDEEVFRGLRAGASSYLLKDVEPAQLIDTVHAVYAG 125 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 + + + +L+ARQ E+L LA G SN EI L IS GTVKAH++++ Sbjct: 126 RKAIDPSIAAKLAEHVAS-DALTARQLEVLRSLAEGRSNIEIANTLYISEGTVKAHIKAI 184 Query: 181 YRRLEVKNRTQAAMM 195 ++L ++RTQA + Sbjct: 185 LQKLGARDRTQAVTI 199 >UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria RepID=Q2LSF1_SYNAS Length = 217 Score = 245 bits (627), Expect = 8e-64, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 75/205 (36%), Gaps = 9/205 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + +++ D I G++ L+ + A + ++++D Sbjct: 3 VNVLLADDHKIVRDGLRTLLETHGSMNVVAEAENGQKTITLARELHPEIIIMDISMPDMN 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +K P +KV+ + ++ ++ ++ + +D E A+ + Sbjct: 63 GIDATRKITSDLPGIKVIALSMHADRHFVIGMLEAGASGYLLKDCAFEELVNAIQTVLSN 122 Query: 121 MMFLPGDWR---------TTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTG 171 +L + L+ R+RE+L +LA G S K+I L++S Sbjct: 123 HTYLSPTIADIVVKNYVHKAAGTSVVVSSELTPRERELLQLLAEGLSAKQIAANLHVSVK 182 Query: 172 TVKAHLESLYRRLEVKNRTQAAMML 196 TV+ H ++ ++L V + + Sbjct: 183 TVETHRRNITQKLGVGSVAELIKYA 207 >UniRef50_C1A9U5 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9U5_GEMAT Length = 223 Score = 245 bits (626), Expect = 8e-64, Method: Composition-based stats. Identities = 41/204 (20%), Positives = 78/204 (38%), Gaps = 8/204 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D ++ G++ L + AS + +V+LD E Sbjct: 11 IRVLIADDHALVREGLRYVLDADPGIEVVGEASNGRTAVDLALQHVPDVVVLDITMPEES 70 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + P+ +VL+ + +++E + + +DS E A+ + G Sbjct: 71 GLKAAARLREALPDTRVLLLSMHDQGEYVREGMRIGTHGYLLKDSAGEELRAAIRAVHAG 130 Query: 121 MMFLPGDWRTTPE--------KDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 F L L+ R+R++L +A G +NK I L IS T Sbjct: 131 GTFFSPAVVRRLTSTEVVSEGAPAAQLDLLTPRERDVLAGVARGLTNKAIAAELGISRRT 190 Query: 173 VKAHLESLYRRLEVKNRTQAAMML 196 V+AH ESL R+L++ + Sbjct: 191 VEAHRESLMRKLQIHSVAGLTRFA 214 >UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37 Tax=Bacteria RepID=D1AEE5_THECD Length = 244 Score = 245 bits (626), Expect = 8e-64, Method: Composition-based stats. Identities = 40/208 (19%), Positives = 81/208 (38%), Gaps = 13/208 (6%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLES-----YPEALVMLDGDQ 56 +I++ D ++ G+++ L + A E +++ L +LD Sbjct: 29 RILLADDHALVRRGVRLILDGEPDLWVVGEAGDGAEAIEQVRRRAGTPQEVDLAVLDVAM 88 Query: 57 DGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS 116 ++ +P +++LI N+++L E + V + A + Sbjct: 89 PRMTGLQAARELSRMYPRLRILILTMHDNEQYLFEALKAGAAGYVLKSLADRDLVQACRA 148 Query: 117 AAMGMMFLPG--------DWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNI 168 A G FL + + + L+ R+ EIL ++A G S++EI L I Sbjct: 149 AVRGEPFLYPGAISVLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSREIADTLFI 208 Query: 169 STGTVKAHLESLYRRLEVKNRTQAAMML 196 S TV+ H ++ +L +K+R + Sbjct: 209 SVKTVERHRANILAKLGMKDRLELTRYA 236 >UniRef50_C7MRK0 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MRK0_SACVD Length = 226 Score = 245 bits (626), Expect = 9e-64, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 91/206 (44%), Gaps = 10/206 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYP------EALVMLDG 54 +++++ D +I G++ L+ + A+ E L +V++D Sbjct: 11 VRVMVVDDHAIVRRGLRAYLETVPDLRLVSEAADGQEAVDLLNERHVVGDPMPHVVLMDL 70 Query: 55 DQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAV 114 + + +P+VKV++ + + + V +D+ E A AV Sbjct: 71 QMPRLDGIEATRSILASYPDVKVVVLTSFSEAERVHAALSAGAAGYVLKDAEPEEVATAV 130 Query: 115 NSAAMGMMFLPGDWRTTPEKDIKDLK----SLSARQREILTMLAAGESNKEIGRALNIST 170 +A G + L + + + SL+AR+R+IL ++ G SN+EI L IS Sbjct: 131 RAAVKGEVHLDAAVARLLARRMASPQVGVTSLTARERDILVLVGQGLSNREIADRLVISE 190 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 T + H+ ++ +L++ +RTQAA++ Sbjct: 191 RTARTHVSNVLSKLQLSSRTQAALLA 216 >UniRef50_D1CI66 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1CI66_THET1 Length = 218 Score = 244 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 45/205 (21%), Positives = 88/205 (42%), Gaps = 10/205 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 M++++ D ++F ++ L+ R + A E + +V++D G Sbjct: 1 MRVLIADDHALFRDSLRTLLEAR-GVEVVGEAETGKEAVELARELRPDVVLMDLKMPGMD 59 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + PEVKV++ + L E + L + +D + F + +A+ G Sbjct: 60 GLAATRMISAEMPEVKVVVLTASEDDEDLFEAVKSGALGYMFKDVRSDQFFELLEAASRG 119 Query: 121 MMFLPGDWRTTPEKDI--------KDLKSLSARQREILTMLAAGE-SNKEIGRALNISTG 171 +++ ++ + L+ R++EIL +L G SNKE+ L +S Sbjct: 120 EPAFTPGLARKLLREMSKPAGRAEREPEVLTEREQEILELLVQGVTSNKELAERLILSEN 179 Query: 172 TVKAHLESLYRRLEVKNRTQAAMML 196 TVK HL ++ +L ++NRTQ Sbjct: 180 TVKYHLRNILDKLHLQNRTQVVAYA 204 >UniRef50_B2A7N5 Two component transcriptional regulator, LuxR family n=5 Tax=Firmicutes RepID=B2A7N5_NATTJ Length = 232 Score = 244 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 43/226 (19%), Positives = 93/226 (41%), Gaps = 28/226 (12%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D Q+I +K + + +S +E + E ++++D Sbjct: 4 IKVMIADDQTILADSLKTIIDLEDDMEVVAVSSNGEETLEISEKLLPDIILMDIRMPKMD 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +K ++PE+K++I T + ++ + + + + +D + ++ A Sbjct: 64 GVECTKKLKEKYPEIKIIILTTFDHDEYIVDALSYGASGYLLKDIDGDKLISSIRDAYND 123 Query: 121 MMFLPGDWRTTP----------------------------EKDIKDLKSLSARQREILTM 152 + +P +K+I + L+ R+ EI + Sbjct: 124 KLLIPTSIAAKLIGKIDNRKQQPTDDHKDEPLKSQDRKESQKEINLYEELTQREIEIAQL 183 Query: 153 LAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNI 198 + AG SNK+I L I+ GTVK ++ ++Y +L VK RT A + L Sbjct: 184 MVAGLSNKKIAEKLFITQGTVKNYITNIYSKLGVKERTSAVLYLQK 229 >UniRef50_Q027R2 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q027R2_SOLUE Length = 247 Score = 244 bits (624), Expect = 1e-63, Method: Composition-based stats. Identities = 44/216 (20%), Positives = 86/216 (39%), Gaps = 20/216 (9%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++IV+ D IF G+ L + A ++ L+ + +++LD G Sbjct: 23 IRIVVADDHPIFRDGLCRLLALEEDFEVVAQAQDGRQVLDVLQQHEPDILLLDLKMPGLD 82 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 LQ+ + + +V++ +K + + IV + + E ++ G Sbjct: 83 GLATLQRLQIAKNKTRVIVLTASDDKNEFVQAMKLGTSGIVLKQTATELLIKSIRKVHAG 142 Query: 121 MMFLP-----------------GDWRT---TPEKDIKDLKSLSARQREILTMLAAGESNK 160 ++L P ++ LS R+REI+ ++A G NK Sbjct: 143 EIWLDSHTTAAVIRQFVANDETPAMAAPSQAPPTRERERSPLSQREREIVALVAQGFKNK 202 Query: 161 EIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMML 196 E+ + IS TVK HL +++ +L V +R + A+ Sbjct: 203 EMAEKMFISEQTVKNHLHNIFDKLGVSDRLELALYA 238 >UniRef50_C1TQ52 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQ52_9BACT Length = 214 Score = 244 bits (624), Expect = 1e-63, Method: Composition-based stats. Identities = 39/203 (19%), Positives = 82/203 (40%), Gaps = 8/203 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D I G+K L ++ + A +E + ++D Sbjct: 3 IKILLADDHKILREGVKALLNRQEDMEVVAEAGNGEEALSIAGEIRPDVTVMDVMMPQMD 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ V +V+ + ++ ++ E++ L + +D AV G Sbjct: 63 GIEATRRIVEDGSS-RVVALSMYADRSFVSEMLKVGALGFLLKDCASTELVEAVRKVMDG 121 Query: 121 MMFLPGDWRTTPEK-------DIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 ++L K D D++ L+ R++EIL +LA G +N+E+ L++S TV Sbjct: 122 EIYLGPSISHIVAKLYVSSLHDPDDIEPLTPREKEILMLLAEGNTNREVAERLHLSIKTV 181 Query: 174 KAHLESLYRRLEVKNRTQAAMML 196 H + + +L++KN Sbjct: 182 GTHRQHIMNKLKLKNLADLVKYA 204 >UniRef50_B9XC41 Two component transcriptional regulator, LuxR family n=7 Tax=Verrucomicrobia RepID=B9XC41_9BACT Length = 267 Score = 244 bits (624), Expect = 1e-63, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 70/206 (33%), Gaps = 10/206 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D ++ G++ L + A E Q + ++++D Sbjct: 31 IRVLLADDHTVVRQGLRALLSGEKDIQIVGEAGTGREAVQMAQKLTPDVILMDIAMPLMN 90 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +K P KVL+ ++ ++Q++ + + + AV G Sbjct: 91 GLEATRKIAEVAPSAKVLVLSSYGEDDYVQKLTEAGASGYLIKHAAANDLVAAVRETHKG 150 Query: 121 MMFLPGDWRTTPEKDIK----------DLKSLSARQREILTMLAAGESNKEIGRALNIST 170 F ++ L+ R+ E L + AG+ NK I + IS Sbjct: 151 NAFFSPGIAKRLRDQVRAGFANGNGTKASFELTERELETLGHIVAGKPNKVIACDMGISI 210 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 TV+ H + + +L + Sbjct: 211 KTVEKHRQQVMNKLNIHEVASLTRYA 236 >UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VH7_CYTH3 Length = 220 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 87/211 (41%), Gaps = 15/211 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + I++ D +I G+K +L+ + + A+ + + ++ +V++D Sbjct: 4 INILLVDDHTIVRDGIKATLKDQKNFHIVGEAANGLDGIEAVKQLKPDVVIMDITMPEMS 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++P+ KVLI + N+ ++ + + + +D + F A+ + G Sbjct: 64 GIEAADVISKKYPDSKVLILSMHDNETYILKSVEAGAYGYLLKDVDKDEFIKAITAVYNG 123 Query: 121 MMFLPGDWRTTPEKD---------------IKDLKSLSARQREILTMLAAGESNKEIGRA 165 + + D L+ R++ IL M+ G++N+EI Sbjct: 124 DKYFNTAISSVLVSGYLSKVKQTDSIQSGYSNDEYELTKREKGILKMITDGKNNREIADG 183 Query: 166 LNISTGTVKAHLESLYRRLEVKNRTQAAMML 196 L IS T++ H ++ ++L+VKN + + Sbjct: 184 LGISIRTIETHRANIMKKLKVKNAVELVRIA 214 >UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT Length = 220 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 78/206 (37%), Gaps = 10/206 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ + +I G+K L + + + E +V++D + Sbjct: 5 VRVLLVEDHTIVREGLKALLTATEDLEVVGEVADGRAAVEAAERLAPDVVVMDINMPKLD 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ + +VLI + + +++ I + + S + A+ A G Sbjct: 65 GVGATREIREKVNAPRVLILSMYDGEEYVRPAIRAGASGYLLKGSGLSDLVTAIREVAGG 124 Query: 121 MMFLPGDWR----------TTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIST 170 F + ++ SL+ R+RE+LT++ G+S+ EI + L +S Sbjct: 125 NAFFSPTVAKILLQESRGERSVKEAPDPADSLTKREREVLTLVGEGKSSPEIAKILGLSV 184 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 T++ H + +L V N Sbjct: 185 KTIEGHRGRIMAKLGVHNVAGLVRQA 210 >UniRef50_Q5WI37 Two-component response regulator n=5 Tax=Bacillaceae RepID=Q5WI37_BACSK Length = 210 Score = 243 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 91/203 (44%), Gaps = 7/203 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ + Q + G+K ++ A + + E++ + +LD Sbjct: 2 IKVLLAEDQVMVRQGLKAMIETDEDIKVTGEADDGRKALRLCETHVFDVAILDIRMPEMD 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + +++P++K+L+ T + +++ E + V + ++ E+ ++ S G Sbjct: 62 GIEAAKMMRLRYPKMKILMLTTFDDHQYVVESLKLGVNGYMLKNGDTESLIRSIKSTING 121 Query: 121 MMFLPGDWRTTP-------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 + L +++ SL+ R+R ILT + G +NKEI L +S GTV Sbjct: 122 GLSLEDQVAAKVVPTLLQNQEEPSIDPSLTPRERAILTCIGEGLNNKEIAERLGLSVGTV 181 Query: 174 KAHLESLYRRLEVKNRTQAAMML 196 K ++ +L +++RTQ A+ Sbjct: 182 KNQTSHIFDKLALRDRTQLAIYA 204 >UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8B3_9BACT Length = 212 Score = 243 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 44/196 (22%), Positives = 92/196 (46%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G+K L++ + A+ DE W+ +E + +LD G Sbjct: 4 IRVILADDHPLTRQGLKAYLEREENVALVGEAADGDEAWKLIEELKPDVALLDIRMPGAD 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L ++ V ++ + +++++ + V + ++ A+ + A G Sbjct: 64 GITLARRIKENKLPVAAIMLTSYDSQQYVLASLKAGAKGFVLKTTSAGALMKAIQTVATG 123 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 +FL + + + ++LS R+RE+L A G S+KE+ L IS TV+ HL S+ Sbjct: 124 SLFLDSEVASVVGAQEELTEALSPREREVLLCAARGLSSKEVAAQLYISERTVQTHLASV 183 Query: 181 YRRLEVKNRTQAAMML 196 Y +L N+T+A ++ Sbjct: 184 YDKLGAHNKTEAMLLA 199 >UniRef50_UPI0001788591 two component transcriptional regulator, LuxR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788591 Length = 202 Score = 243 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 90/196 (45%), Gaps = 1/196 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 M I++ D + +++ L + A+ Q E +V++D G Sbjct: 1 MNILIVDDDPLVCQSLRLLLSREADMEVTATANDGAAAIQCCEEVLPDIVLMDIRMPGMD 60 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ ++P+V++++ T ++ ++ + + + + V + A + + A G Sbjct: 61 GIQAARQIKQKWPQVQIMMLTTFQDEHSIRLALLAGAEGYMLKSTQVSSMAQQLRALASG 120 Query: 121 MMFLPGDWRTTP-EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLES 179 + + T + ++ L+ R+ +IL ++A G SN+EI L IS GTV+ L Sbjct: 121 SSVVDANVLKTLMLPEKENRSDLTPRENDILELVALGCSNREIAEQLFISEGTVRNTLSI 180 Query: 180 LYRRLEVKNRTQAAMM 195 + +LE+++RTQ A+ Sbjct: 181 ILDKLELRDRTQLAIY 196 >UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=C6E2Z1_GEOSM Length = 216 Score = 243 bits (622), Expect = 2e-63, Method: Composition-based stats. Identities = 42/205 (20%), Positives = 86/205 (41%), Gaps = 9/205 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D SI G++I L++ + A + + +V++D G Sbjct: 2 IKVMVVDDHSIVREGIRILLERFPDLSVVAEADNGRKASELAADLAPHVVLMDMTMPGLN 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 Q+ + PEV+VLI + +KR++ + + +D AV A G Sbjct: 62 GIDATQRLLAACPEVRVLILSMHKDKRFVSQAFRAGARGYLLKDCASAELVQAVRQVACG 121 Query: 121 MMFLPGD---------WRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTG 171 M++ PE + L+ R+RE+L ++A G + K LNI+ Sbjct: 122 EMYVCHGIIGVVVHDYVTRLPESLTQPEVPLTPREREVLQLIAEGNNAKNAAYQLNINVK 181 Query: 172 TVKAHLESLYRRLEVKNRTQAAMML 196 TV H + + ++L++++ + Sbjct: 182 TVDTHRQQIMKKLKMRSVAELTKYA 206 >UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM Length = 216 Score = 243 bits (622), Expect = 2e-63, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 86/203 (42%), Gaps = 7/203 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D ++ G+++ L + + A+ + +V+LD Sbjct: 4 IKVLIVDDHTLMRSGLRLMLSAQEDIEVVGEAADGSGGIAMAQKMRPDVVLLDISMPEMS 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L+ + P+++V++ + R+++E + V + + + AV + G Sbjct: 64 GLECLKTLLANQPDLRVILLTMHEDARYVKEGFALGAMGYVLKKAADDVLYQAVRAVYSG 123 Query: 121 MMFLPGDWRTTPEKDIKDLK-------SLSARQREILTMLAAGESNKEIGRALNISTGTV 173 M++ ++ + LS +++++L+++AAG +N+EI L IS TV Sbjct: 124 EMYIQPSITKAVVAELTERPRADDLRKPLSDQEKKVLSLIAAGYANREIAEQLVISVKTV 183 Query: 174 KAHLESLYRRLEVKNRTQAAMML 196 + + + +L K R+ Sbjct: 184 ETYKYRIMEKLNCKKRSDLVKFA 206 >UniRef50_A8L3K7 Two component transcriptional regulator, LuxR family n=16 Tax=Actinomycetales RepID=A8L3K7_FRASN Length = 244 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 45/202 (22%), Positives = 91/202 (45%), Gaps = 7/202 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++ + D I +G++ +L + + A A E +++ + + +LDG Sbjct: 36 IRVFVLDDHEIVRNGLRQTLARHDDIEVVGEAGLAAEALRRIPALHPHVAVLDGRLPDGS 95 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + ++ P+V LI + + L I V ++ A+ + A G Sbjct: 96 GIDVCREVRSALPDVACLILTSYDDDEALFSAIMAGAAGYVLKEIRGNDLVGAIRTVASG 155 Query: 121 MMFLPGDWRTTPEKDIKD-------LKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 L + ++D + +L+ R+REIL ++A G +N++IG L +S TV Sbjct: 156 QSLLAPSVTRRVLERLRDGPSEDPAMATLNQREREILQLIADGLTNRQIGTRLGLSEKTV 215 Query: 174 KAHLESLYRRLEVKNRTQAAMM 195 K ++ S+ +L + +RTQAA+ Sbjct: 216 KNYVSSILEKLGLASRTQAAVY 237 >UniRef50_C4RJ91 Two-component system response regulator n=2 Tax=Actinomycetales RepID=C4RJ91_9ACTO Length = 232 Score = 242 bits (620), Expect = 4e-63, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 86/215 (40%), Gaps = 17/215 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++ ++ D Q + G+++ L + A+ + +E +V++D Sbjct: 2 IRALVVDDQGLVRAGIRVLLDTAPDIEVVGEAADGHNAVRLVERLRPDVVLMDIRMPRVD 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ + P VLI T + + + + + +D AV AA G Sbjct: 62 GIEATRRLLAAAPLTNVLILTTFADDDSVYGALSAGAVGYLVKDGEPADMLDAVRRAARG 121 Query: 121 MMFLPGDWRTTPEKDIKD-----------------LKSLSARQREILTMLAAGESNKEIG 163 L + L +L+AR+R++L+++ G SN EI Sbjct: 122 EPLLAPSVLARVVDRARRSHAADRNGDIEQPDTAVLAALTARERDVLSLVGVGLSNAEIA 181 Query: 164 RALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNI 198 R LN+ TVK H+ +L +L ++NR QA ++ + Sbjct: 182 RDLNVGVTTVKTHIVALLEKLGIRNRVQAGILAHR 216 >UniRef50_C1RMQ2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Actinomycetales RepID=C1RMQ2_9CELL Length = 254 Score = 242 bits (620), Expect = 4e-63, Method: Composition-based stats. Identities = 39/208 (18%), Positives = 78/208 (37%), Gaps = 12/208 (5%) Query: 3 IVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCY 62 +++ D Q + G++ L+ + + A + + ++D G Sbjct: 12 VLVVDDQPLIRQGIRAVLRGQPGVEVVGEAHDGHSAVRTARRLRPDVTLMDVQMPGMDGV 71 Query: 63 WLLQKTVV-QFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 + P V++ + E + +V +D+ A+++AA G Sbjct: 72 EATRVICADDDPPTSVVVLTMYDQDEHVFEALRAGARGLVLKDAPTSELVAAIHAAAAGD 131 Query: 122 MFLPGDWRTTPEKDIKD-----------LKSLSARQREILTMLAAGESNKEIGRALNIST 170 L ++ L+AR+R++ +L G S E L + Sbjct: 132 SLLSPSVTRRLIEEFARRPTVRMEATDGPAELTARERDVFRLLVQGLSTAEAAERLTLGD 191 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMMLNI 198 TVK+H++SLYR+L V++R QA + Sbjct: 192 STVKSHVQSLYRKLGVRDRVQAVIYAYE 219 >UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID=Q9RPE7_CORDI Length = 233 Score = 242 bits (620), Expect = 5e-63, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 81/215 (37%), Gaps = 19/215 (8%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + + + D Q + G ++ L + A+ E + + P ++++D Sbjct: 2 ITVGLVDDQQLVRAGFRMVLDSQSDITVAWEANDGKEALENAANTPVDVILMDVQMPVMD 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ V + ++++ T ++ ++ + + +D+ E AV + Sbjct: 62 GLEATKRIVATNTDTRIIVLTTFDSENYVVGAVEHGASGFLLKDTAPEDLIAAVRTVGEQ 121 Query: 121 MMFLPGDWRTTPEKDIKD-------------------LKSLSARQREILTMLAAGESNKE 161 + K ++ + L+ R++EIL ++A G+SN E Sbjct: 122 SAVISPAATAVLFKSMRGHAPQTDLVATPGGDINAGLIDPLTPREQEILLLIALGKSNTE 181 Query: 162 IGRALNISTGTVKAHLESLYRRLEVKNRTQAAMML 196 I L IS TVK H+ + + ++R A + Sbjct: 182 IAEELFISLPTVKTHVSKVLSKTGSRDRVHAVLFA 216 >UniRef50_B4DBM9 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBM9_9BACT Length = 209 Score = 242 bits (620), Expect = 5e-63, Method: Composition-based stats. Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 2/198 (1%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 +I++ D I G+ SL + A+ + + + LV++D + Sbjct: 8 RILIVDDHFIARKGLIGSLSAEPDIEIVAEANNGFQAVEMFVLHRPDLVLMDVRLPLQDG 67 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 + P+ ++ + + + I V+ +P+ E A++ A G Sbjct: 68 VQAARTIRNDHPQARIAMLTVSDAEEDILGAIDAGVVGYLPKSVEREQLLTAIHRLAEGG 127 Query: 122 MFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLY 181 + + + SL+ R+ E+LT + G SNKEIG L I+ TV+ HL L+ Sbjct: 128 EYFAPEIEAKL--RSTNRVSLTKRETEVLTQIVKGRSNKEIGYDLGIAEPTVRLHLTHLF 185 Query: 182 RRLEVKNRTQAAMMLNIS 199 ++L V +RTQAAM+ Sbjct: 186 KKLHVMDRTQAAMVAVQR 203 >UniRef50_C7RBI1 Two component transcriptional regulator, LuxR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBI1_KANKD Length = 212 Score = 242 bits (619), Expect = 5e-63, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 81/204 (39%), Gaps = 8/204 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D +I G+ L + + AS E +K + ++D Sbjct: 2 IRVMLADDHTILRQGLVSLLSKDADCTVVAEASNGLEAVEKALETRPQVAVIDISMPELN 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++++ + PE K+L+ + ++ ++ + +DS E AV + A G Sbjct: 62 GMEVVKRIHDKLPECKILVLTMHEEQEYVIHMVRAGASGYLLKDSASEELIDAVKALATG 121 Query: 121 MMFLPGDWRTTPEKD--------IKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 + + K+L+ R+RE+ ++ G++ K+I R L+IS T Sbjct: 122 KTYYSQYAASVLATQYSQPDKEWQDPYKNLTQREREVFHLVVDGKTTKDIARTLDISVKT 181 Query: 173 VKAHLESLYRRLEVKNRTQAAMML 196 + H + +L V N + Sbjct: 182 AENHRGKVLDKLGVSNTAELVRYA 205 >UniRef50_B8GUD1 Two component transcriptional regulator, LuxR family n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GUD1_THISH Length = 227 Score = 242 bits (619), Expect = 5e-63, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 87/207 (42%), Gaps = 11/207 (5%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 ++++ D ++F G++ L++ ++ + +++LD Sbjct: 4 RVLLIDDHTLFREGLQELLKRH-GIDTVGAVGDGETGIDLARDLLPDVILLDMRMPAMNG 62 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 +L++ ++ +++ T ++ L E + + ++ A+ G Sbjct: 63 LEVLRRLRQAGLKMPIVMLTTSTEEQDLVECLRNGAQGYLLKEMEPGDLVDALEEILQGK 122 Query: 122 MFLPGDWRTTPEK----------DIKDLKSLSARQREILTMLAAGESNKEIGRALNISTG 171 + D + + L+ R+ EIL +LA G+SNK I R L IS G Sbjct: 123 TVVAPDLAQLLVRVVQGKSSSANEPSPFDELTPREGEILALLAEGQSNKVIARNLGISDG 182 Query: 172 TVKAHLESLYRRLEVKNRTQAAMMLNI 198 TVK H++++ R+L V +R +AA++ Sbjct: 183 TVKLHVKAILRKLGVHSRVEAAVLAVQ 209 >UniRef50_D2PZY5 Two component transcriptional regulator, LuxR family n=2 Tax=Actinomycetales RepID=D2PZY5_9ACTO Length = 252 Score = 242 bits (619), Expect = 6e-63, Method: Composition-based stats. Identities = 36/228 (15%), Positives = 85/228 (37%), Gaps = 29/228 (12%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D Q + G+ + L ++ A +E + ++ + +V++D Sbjct: 11 IRVLVADDQGVIRTGLAMILDHEPDLTTVAQAGDGEEALRLIDRFDPDVVLMDIRMPVMD 70 Query: 61 CYWLLQKTVVQF-----PEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVN 115 ++ VL+ T ++ ++ + + +D+ + AV Sbjct: 71 GLVATERITRANQEAGRSRPAVLVLTTFDDEAYVLSAVRAGASGFLLKDTDPDLLVAAVR 130 Query: 116 SAAMGMMFLPGDWRTTPEKD------------------------IKDLKSLSARQREILT 151 + G + + L LS R+R++L Sbjct: 131 AVHRGDSLVDPASTRVLLERCVELERQVGADPVAAAPHAADGRWTGLLAQLSERERDVLV 190 Query: 152 MLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 +A G SN+++ L +S TVK H+ S+ +L + +R QA ++ + Sbjct: 191 WMARGLSNRDLANKLFVSETTVKTHVSSVLSKLGLSSRVQAVVVAYEA 238 >UniRef50_D1BXU0 Two component transcriptional regulator, LuxR family n=3 Tax=Actinomycetales RepID=D1BXU0_XYLCX Length = 223 Score = 242 bits (619), Expect = 6e-63, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 80/212 (37%), Gaps = 14/212 (6%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D Q + G+ + + A + + LD G Sbjct: 2 IRVLIADDQPLVRAGLTALVNLEPDLEVVGEAGDGVTALAMAQDLRPDIACLDIRMPGLD 61 Query: 61 CYWLLQKTV--VQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAA 118 + ++ + VL+ T ++ + V + +D+ ET A+ A Sbjct: 62 GIAVARRLCGPDVEAPIPVLVLTTFDLDDYVFGALEAGVSGFLLKDAEPETITTAIRQVA 121 Query: 119 MGMMFLPGDWRTTPEKD------------IKDLKSLSARQREILTMLAAGESNKEIGRAL 166 G + ++ + L++R++EIL +LA G SN EI R L Sbjct: 122 AGNGTIDQTLTRRILREFVQRRSLQPVSTSRGNGVLTSREQEILLLLAQGMSNDEIARTL 181 Query: 167 NISTGTVKAHLESLYRRLEVKNRTQAAMMLNI 198 + TVK+HL + +L V++R QA + Sbjct: 182 VVELSTVKSHLARMLPKLGVRSRLQAVVWAYQ 213 >UniRef50_D2B5Y0 Response regulator receiver protein n=14 Tax=Actinobacteria (class) RepID=D2B5Y0_STRRD Length = 227 Score = 242 bits (619), Expect = 6e-63, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 79/210 (37%), Gaps = 13/210 (6%) Query: 3 IVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCY 62 +++ D + G+ + L + A ++ ++ + +V++D Sbjct: 11 VLIVDDDPLVRAGLVMMLGGAPDIRVVAQAGDGTQVLPLVDRHAPDVVLMDIRMPVMDGL 70 Query: 63 WLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMM 122 + + +V++ T + + + +D+ + AV A G Sbjct: 71 AATEVLRARPGAPEVIVLTTFDADDHVLRALRAGAAGFLLKDTPPDEIVTAVRQVARGYP 130 Query: 123 FLPGDWRTTP-------------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIS 169 L + L L+AR+RE+ L G SN EIG L++S Sbjct: 131 VLSPVVTRRLIARVADSGHDRRRTRAGDRLALLNAREREVAVALGQGRSNAEIGAVLHLS 190 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 TVK H+ + +L + NR Q A++++ + Sbjct: 191 VPTVKTHVSGILTKLGLNNRVQIALLVHDA 220 >UniRef50_Q024Y7 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q024Y7_SOLUE Length = 225 Score = 241 bits (618), Expect = 7e-63, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 91/207 (43%), Gaps = 13/207 (6%) Query: 3 IVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCY 62 IV+ D + G+++ L++ + + A + Q + +V++D G Sbjct: 5 IVLVDDHKLVRDGVRMILERGSEFLVVGEAENGADAVQLCKKSSPDIVLMDIGLPGMNGI 64 Query: 63 WLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMM 122 + + P VKV+I + ++ + I A V + ++ A+ + A G Sbjct: 65 EATTELLRHCPSVKVIILSMYDDENSVVSAIRSGARAFVLKKASSNELLDALRTVARGGS 124 Query: 123 FLPGDWRTTPEK----------DIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 +L + D L+SLS R+ ++L ++A G+++K+I L++ T Sbjct: 125 YLSSQVSDRLLQRIQRGDLETHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLLDLGLQT 184 Query: 173 VKAHLESLYRRLEVKNR---TQAAMML 196 V+++ +++ ++L V N TQ A+ Sbjct: 185 VRSYRKTMMKKLGVNNVAGLTQLALAA 211 >UniRef50_D2Q2Q8 Two component transcriptional regulator, LuxR family n=3 Tax=Actinomycetales RepID=D2Q2Q8_9ACTO Length = 216 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 82/211 (38%), Gaps = 12/211 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D Q + G+++ + + AS E + +V++D Sbjct: 2 IRVLVVDDQDLVRAGLRLLIDNTDDLRVVGEASDGREALALAREHQPDVVLMDLQMPVMG 61 Query: 61 CYWLLQKTVV--QFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAA 118 + V++ T + + + + + +D + A+ +A Sbjct: 62 GVETTAAIRADPLLKDTPVVVLTTFDHDADVVDAVQAGASGYLLKDLAADELRGAIRTAV 121 Query: 119 MGMMFLPGDWRTTPEKDIKD----------LKSLSARQREILTMLAAGESNKEIGRALNI 168 G + I L L+AR+ +IL + G SN+EIG+AL + Sbjct: 122 TGGAPIAPKVAKLMMHRISRMPSRKVQEETLAGLTARELDILAHVGRGLSNEEIGQALFL 181 Query: 169 STGTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 S T + ++ L +L V++R+Q ++ + + Sbjct: 182 SPETARTYVSRLLAKLGVRDRSQLVVLAHKA 212 >UniRef50_A9B4P1 Two component transcriptional regulator, LuxR family n=11 Tax=Bacteria RepID=A9B4P1_HERA2 Length = 257 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 46/217 (21%), Positives = 87/217 (40%), Gaps = 21/217 (9%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++++M D +F G++ +L I S A+E + + +V+ D + Sbjct: 5 VKVLMVDDHPLFRQGVRWALSSERDIKIIGEGSSAEEGLVLISEHEPDVVLTDLNLPNMD 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + Q+P + V++ + + + A ++ + +T A + A G Sbjct: 65 GLEFTRTIRRQYPNIGVVMLSVYESDEHAFNALRAGAAAYYSKEISPKTLATVLRRVARG 124 Query: 121 MMFL------PGDWRTTPEKDIKDL---------------KSLSARQREILTMLAAGESN 159 + + L LS R+ E+L +A+G +N Sbjct: 125 EYVINDVMFEDPRVADRILTQFRGLQTGIVAEPDLDISLFSPLSDREIEVLEHIASGATN 184 Query: 160 KEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMML 196 K+I AL IST TVK H+ S+ R+L + +RTQA + Sbjct: 185 KDIADALKISTQTVKNHISSILRKLSLNDRTQAVLYA 221 >UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD Length = 217 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 11/209 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++IV+ D ++ G+K+ L I AS +E +++ LV+LD Sbjct: 5 LRIVLADDHAVLRAGLKVLLNAEPDLEVIGEASDGEEAIDRVDDLHPDLVLLDLTMPKLN 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +++ + + ++K+L+ ++ +L+ V+ V + + A+ + A G Sbjct: 65 GVDCIEELLKKHADLKILVLTMHDDEEYLKAVLQVGAKGYVLKKAADVELLSAIRTVARG 124 Query: 121 MMFLPGDWR-----------TTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIS 169 MF+ PEK+ K LK LS R+ E+L LA G +N++I L++S Sbjct: 125 EMFIYPTMAAEFVYRHLVSPREPEKESKKLKQLSERELEVLRNLALGHTNQDIADLLHVS 184 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMMLNI 198 TV+ + + +LE+ R + Sbjct: 185 VKTVETYKARVMEKLEMHKRAELVRYAME 213 >UniRef50_C0Z4M7 Two-component response regulator n=7 Tax=Bacillales RepID=C0Z4M7_BREBN Length = 235 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 85/219 (38%), Gaps = 23/219 (10%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++V+ D Q++ G+ ++ + AS +E + + +V++D Sbjct: 10 IRVVLVDDQTMIRQGLGYVIKMQKDMEVSGEASNGEEAVKIVGEIIPDVVLMDVQMPNMS 69 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ P VKVLI T ++ + I + + +DS + + A G Sbjct: 70 GIDATREITRLHPSVKVLILTTFDTYDYIVDGIRAGAVGYMLKDSDSQDMLDLIRRAHQG 129 Query: 121 MMFLPGDWRTTPEKDIKD-----------------------LKSLSARQREILTMLAAGE 157 ++ L+ R+R++L L+ G+ Sbjct: 130 EALFYTATAAKALAEVLQFQQKNYEPDSDADCDSTLPPLVMFDQLTDRERDVLEQLSYGK 189 Query: 158 SNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMML 196 N +I + L IS GTVK H+ + +++ V++RTQA Sbjct: 190 RNDQIAQHLLISGGTVKTHIHRILQKMGVEDRTQAVAKA 228 >UniRef50_D0LE76 Response regulator receiver n=2 Tax=Actinomycetales RepID=D0LE76_GORB4 Length = 228 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 81/208 (38%), Gaps = 8/208 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D Q + G++ L+ R + + E+ + + +V++D Sbjct: 14 IRVLLVDDQELIRTGLRRILRVRDGFHIVGECADGSEVPAAVAEHSPDVVVMDLRMRNVD 73 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 VL+ T + + L + + +DS E+ AV + Sbjct: 74 GITATSMLAALNDPPPVLVLTTFDDDKLLSGALRAGAAGFILKDSPAESLIWAVRAVVRD 133 Query: 121 MMFLPGDWRTTPEKDIKD--------LKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 FL + L+ R+ ++L ++A G +N EI L IS T Sbjct: 134 GAFLDPAVTGRVLTGYRRSTTGDIATPDELTERETDVLRLVARGRTNAEIAAGLGISEVT 193 Query: 173 VKAHLESLYRRLEVKNRTQAAMMLNISS 200 VK+H+ ++ +L++++R A + S Sbjct: 194 VKSHINHIFTKLDLRDRAAAIVYAFDHS 221 >UniRef50_C5B7B5 Nitrate/nitrite response regulator protein NarP n=13 Tax=Gammaproteobacteria RepID=C5B7B5_EDWI9 Length = 215 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 80/197 (40%), Gaps = 3/197 (1%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 ++++ D + G++ L+ + AS E L++LD + G Sbjct: 12 RVMIVDDHPLMRRGVRQLLELDSVFSVVAEASNGSEAIALAGRSQPDLILLDLNMKGLSG 71 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 L+ + + +++I + + ++ + + +DS E + AA G Sbjct: 72 LDTLKALRSEGIDARIIILTVSDARSDVYALVDAGADSYLLKDSEPEALLAQIRQAAEGR 131 Query: 122 MFLPGDWRTTPEKD---IKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLE 178 L L+ R+ ++L + G SNK+I L+IS TVK H+ Sbjct: 132 SVFSESVSAYLSTRSEIADPLADLTERELDVLQEVVRGMSNKQIAAQLHISEETVKVHIR 191 Query: 179 SLYRRLEVKNRTQAAMM 195 +L R+L V++R A ++ Sbjct: 192 NLLRKLNVRSRVAATVL 208 >UniRef50_A0RGC1 DNA-binding response regulator n=12 Tax=Bacillales RepID=A0RGC1_BACAH Length = 597 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 83/212 (39%), Gaps = 15/212 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D Q++ + ++ L+ + + + A E E +V++D Sbjct: 381 IRLLVVDDQALITNSLEQILENQTDFIVVGKAYDGSEALILCEQLQPDIVLMDIQMPEMN 440 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L + ++P +K+++ T + + + + + A+ G Sbjct: 441 GIEALLEMKRRWPNMKIVLMTTFEDSLQAATALEHGAEGYMLKSIHPQEMKEALKLIYNG 500 Query: 121 MMFLPGDWRTTPEKDIKDLKS---------------LSARQREILTMLAAGESNKEIGRA 165 ++ T +++K + L+ R+ EIL L+ G K I Sbjct: 501 GTWIDQSVATRIFEEMKLQREQLAKIKSTKQTFPYGLTKREMEILEHLSNGLRYKSIAAK 560 Query: 166 LNISTGTVKAHLESLYRRLEVKNRTQAAMMLN 197 L +S GT++ + +LY +L V NR +A M Sbjct: 561 LFLSEGTIRNYCSNLYSKLGVSNREEAIKMAR 592 >UniRef50_B9XL75 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XL75_9BACT Length = 234 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 84/206 (40%), Gaps = 10/206 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G+ L + A E K+ +V++D D Sbjct: 19 IKVLLADDHPVVRKGLGSCLNNLEHIEIVGEAVDGQETVSKVRELSPEIVLMDLDMPTMS 78 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + +FP VKVLI + NK ++ ++I V +D+ + A+ S G Sbjct: 79 GLEATKIIRREFPLVKVLILSIHTNKDYVLQIIKSGAQGYVLKDAPLTELVRAIESVHGG 138 Query: 121 MMFLPGDWRTTPE----------KDIKDLKSLSARQREILTMLAAGESNKEIGRALNIST 170 F D ++ + K L+ R+ E+L+M+A G+SNKE+ + + Sbjct: 139 GAFFSPDISQIMLDQYLAEATNGEESGNSKKLTNRETEVLSMIAEGQSNKEMASRMGVGV 198 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 TV+ H E + +L++ N Sbjct: 199 RTVETHRERVMNKLDIHNVAGLTKYA 224 >UniRef50_C0INV4 Two component transcriptional regulator n=1 Tax=uncultured bacterium BLR5 RepID=C0INV4_9BACT Length = 215 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 81/200 (40%), Gaps = 2/200 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I+ D + G+ +Q + + S+A + + ++D Sbjct: 11 IRIMCVDDHPLMHKGISALIQSQPDMTIVGAVSKAGDALATFREKVPDITLMDLRLPDGN 70 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + + P+ +++I +Q + + ++ E + G Sbjct: 71 GIDTMISILKEHPKARIIILTMFEGDVEIQRALKSGACGYILKNMPPEDLLQVIRKVHSG 130 Query: 121 M-MFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLES 179 L T + ++L++R+ E+L +++ G SNKE+G L+IS TVK H+++ Sbjct: 131 EKKRLHPVIAATLADHFGE-ENLTSRETEVLQLISEGNSNKEVGNRLSISEETVKGHVKN 189 Query: 180 LYRRLEVKNRTQAAMMLNIS 199 + +L +RTQA + Sbjct: 190 ILGKLGANDRTQAVSIAVRR 209 >UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeobacter violaceus RepID=Q7NMF3_GLOVI Length = 212 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 43/203 (21%), Positives = 85/203 (41%), Gaps = 8/203 (3%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 +I++ + ++ G++ L Q A+ ++ S LV++D Sbjct: 3 RILIVEDHALMRIGLRQVLSQTPEYEVAGEAADGEQALALARSLQPDLVLMDLGLPVMSG 62 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDST--VETFALAVNSAAM 119 + + ++P ++VL + + + + + AV S Sbjct: 63 TEVTRILKREYPAMRVLALTSHDEDESVFGALAAGADGYCLKATAGIASRLLAAVASVRD 122 Query: 120 GMMFLPGDWRTTPEKDIKDLK------SLSARQREILTMLAAGESNKEIGRALNISTGTV 173 G +L D +D+ + LS R+ E+L ++A G +N EIGR L I++GTV Sbjct: 123 GAAWLDPDIADRVLRDLGRIPQAGADNPLSEREMEVLKLIADGLTNAEIGRRLYIASGTV 182 Query: 174 KAHLESLYRRLEVKNRTQAAMML 196 + H+ ++ +L V +R QAA+ Sbjct: 183 RVHVSNIIAKLGVNDRVQAAVRA 205 >UniRef50_C3AL44 Response regulator receiver n=3 Tax=Bacillus RepID=C3AL44_BACMY Length = 578 Score = 240 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 42/201 (20%), Positives = 81/201 (40%), Gaps = 7/201 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + I++ D Q I ++ L + + A+ + ++ E +V++D Sbjct: 374 IHILIVDDQPIISDSLEFLLDKYG--FRVSVANSGAQALKQCEERQPNVVLMDIQMPKMN 431 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++K ++P+ K+++ T + E I V + E A+ +G Sbjct: 432 GITTMKKIKNRWPDTKIIMVTTFEETSSVSEAIEAGAEGYVLKSVQPEELVAAIRLVHLG 491 Query: 121 MMFLPGDWRTTPEKDIKDLK-----SLSARQREILTMLAAGESNKEIGRALNISTGTVKA 175 L D T K+ + L+ R+ ++L L G KEI L +S GTV+ Sbjct: 492 GTMLSQDVATRLFKEYSPMPKKPPYELTPREMDVLGCLKEGLRYKEIAAKLFLSEGTVRN 551 Query: 176 HLESLYRRLEVKNRTQAAMML 196 + S+Y +L+V R +A Sbjct: 552 YASSIYMKLQVSGRGEAVKKA 572 >UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C4B6_LISGR Length = 214 Score = 240 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 87/197 (44%), Gaps = 10/197 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQD-GE 59 M++++ D ++ +K + + I A+ E + +ES +V++D GE Sbjct: 1 MKLLIADDHAVVRSALKFMINAQKDMEVIGDAADGTEAFLFIESNRPDIVLMDLSMPPGE 60 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 ++ FPE KV++ + ++ + + + ++S+ E A+ S Sbjct: 61 NGLLTTKRITEAFPETKVILLTMHDEEAYITQALQAGAQGYIMKNSSEELLLDAIRSVMG 120 Query: 120 GMMFLPG---------DWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIST 170 G + + + + ++ LS R++EIL ++A G NKEI L IS Sbjct: 121 GQIIIDPVFNYSSKQIEQLKRADASENIIERLSKREKEILPLIALGYGNKEIAERLFISA 180 Query: 171 GTVKAHLESLYRRLEVK 187 TV+ H + ++LE+K Sbjct: 181 KTVEVHKSHIMKKLEMK 197 >UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B1ZVM0_OPITP Length = 219 Score = 240 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 84/205 (40%), Gaps = 9/205 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++IV+ D ++ G++ L++ + A E + ++ + ++D G Sbjct: 5 LKIVLADDHALVRAGIRTLLEKLPGVTIVGEAGDGRETVTLVHTFAPDIAIMDITMPGLN 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + + P KVLI + + ++ + + + +D+ LA+N+ G Sbjct: 65 GFDATARIAREHPRTKVLILSMHTAEDYVLQALRAGATGYLLKDAATAELQLALNAVRKG 124 Query: 121 MMFLPGDWRTTP---------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTG 171 +L + + + K+L+ R REI+ ++A G S KEI LN+S Sbjct: 125 ETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIAFLLNLSVK 184 Query: 172 TVKAHLESLYRRLEVKNRTQAAMML 196 T++ H L RL + + Sbjct: 185 TIETHRMHLMARLGLHDVAGVVRYA 209 >UniRef50_C1I7X4 Two-component system response regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I7X4_9CLOT Length = 226 Score = 240 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 43/207 (20%), Positives = 97/207 (46%), Gaps = 11/207 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++ ++ D ++ G+ + + +EL +++Y +++LD + G+ Sbjct: 6 IRTIVVDDHALIREGLNRIISFEEDLIICGQFRSGEELLNNMKNYNPDVILLDINMPGKN 65 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L+ + +P++KV++ + +K+ + E I A + ++S A+ + +G Sbjct: 66 GIETLKTLKILYPDIKVVMLTVENDKKTIMESIDIGADAYILKESAGSEIVNAIRNVYLG 125 Query: 121 MMFLPGDWRTTP-----------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIS 169 ++ K+I+ LK L+ R+ IL ++ G NKEI L +S Sbjct: 126 EKYIDKSLIKAIFLDIKSDVACKNKEIESLKLLTNRELNILYEISKGLKNKEIAEKLFLS 185 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMML 196 TVK ++ S+++++EV++R QA + Sbjct: 186 EKTVKNYITSIFKKIEVEDRVQATIYA 212 >UniRef50_C6WIC9 Two component transcriptional regulator, LuxR family n=31 Tax=Actinobacteria (class) RepID=C6WIC9_ACTMD Length = 302 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 40/208 (19%), Positives = 79/208 (37%), Gaps = 9/208 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + +V+ D Q++ ++ + + A + +V++D Sbjct: 71 IGVVIADDQALLRGSFEVLVGSAPDLRVLGTAEDGERAVAVAARVRPDVVLMDVRMPNVD 130 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + V+VLI T ++ + + +D+ A+ A G Sbjct: 131 GIEATARICAAQAGVRVLILTTFDLDEYVYAALRAGASGFLLKDTPPADLLAAIRVVASG 190 Query: 121 MMFLPGDWRTTP---------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTG 171 L + + L +++AR+RE+L ++A G SN EI AL++S G Sbjct: 191 EALLSPSVTRRLITEFAARPAARPLPALDAVTAREREVLRLVAEGLSNTEITEALHVSRG 250 Query: 172 TVKAHLESLYRRLEVKNRTQAAMMLNIS 199 T+K H+ L +L ++R Q + S Sbjct: 251 TLKTHVGRLLHKLGARDRAQLVIAAYES 278 >UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZNU7_THASP Length = 220 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 94/203 (46%), Gaps = 7/203 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D +F H ++ L + + A+ +E+ ++ P LV +D G Sbjct: 3 LRILLADDHQMFRHALRALLARDPELEVVAEAASGEEVLAIADAQPVDLVCMDIAMPGMD 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ + + P ++V+ + +++++ +++ + + + A+ + G Sbjct: 63 GIEATRRLLARHPALRVIGLSAFADRQFVTDLLAAGARGYITKGEAGDELLRAIRTVCEG 122 Query: 121 MMFLPGDWRTTPEKDIKD-------LKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 +L + T ++D L+AR+R++L ++A G ++ +IG L+I+ TV Sbjct: 123 RSYLCPEVAATVADALRDSPGVYAAAPRLTARERQVLQLIAEGLTSVQIGDRLHIAASTV 182 Query: 174 KAHLESLYRRLEVKNRTQAAMML 196 + H +L R+L++ N + Sbjct: 183 EVHRRNLMRKLDLHNVAELTRYA 205 >UniRef50_Q67JS2 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67JS2_SYMTH Length = 211 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 44/205 (21%), Positives = 87/205 (42%), Gaps = 7/205 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G+K L + + A+ E S +V+LD Sbjct: 3 IRVLIVDDHELLREGLKSLLSREEDMEVVGEAAGGREAVALCRSLRPDVVVLDARLPDVD 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + ++ + PEV VL+ T + + + V +D ++ + A G Sbjct: 63 GVEVCRQLQEEMPEVAVLMLTTFSDSDLVLGAVRAGARGYVVKDVLGMDLKRSIRAVARG 122 Query: 121 MMFLPGDW-------RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 + + +P D ++ L+ +Q I+ ++A G +N+EI + +S TV Sbjct: 123 EVAMDPKVVGYLMQQMRSPSADKEERIPLNRQQLAIIRLVAQGYTNREIAERMFLSEKTV 182 Query: 174 KAHLESLYRRLEVKNRTQAAMMLNI 198 K +L RR+ VKNR +AAM+ + Sbjct: 183 KGYLAEAMRRMGVKNRVEAAMVASK 207 >UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y661_9BACT Length = 216 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 77/205 (37%), Gaps = 9/205 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D +F+ G++ L + A E E + ++D Sbjct: 3 IRVLLADDHEMFLEGLRELLGKADGIELAGLARDGAEAVAAAERLQPDVALMDMTMPRLN 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 QK P KVL+ + +K + E + V ++ + + LA+ + A G Sbjct: 63 GIQATQKIAAGSPGTKVLVLSMHGDKNLIVESLKAGARGYVLKECSSQELCLAIQTVANG 122 Query: 121 MMFLPGDWRTTPEKDIKDLK---------SLSARQREILTMLAAGESNKEIGRALNISTG 171 +L +T D L LS R+ ++L +L G + K+I L+IS Sbjct: 123 QYYLTPAILSTLIGDYLRLTENEEQGSDCPLSERELDVLKLLVKGCNAKQIAEQLSISKN 182 Query: 172 TVKAHLESLYRRLEVKNRTQAAMML 196 TV H + +L + + Sbjct: 183 TVDTHRRHILDKLGCNSMAELTRYA 207 >UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5X6_PELCD Length = 223 Score = 239 bits (612), Expect = 4e-62, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 103/211 (48%), Gaps = 14/211 (6%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 ++ + D + G+++SL + I AS + +K++ P + ++D D G Sbjct: 8 KVFLADDHPLLRTGLRMSLSRFADIDFIGEASDGFKAVEKIKQNPPDVALIDVDMPGLSG 67 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 ++ Q+P++ +LI ++ +K +++E + V + + A + + + G Sbjct: 68 IAAVRMLRKQYPDMTLLILSSYSDKHFIEEAMQAGADGYVLKSIDINELADLIRAFSCGE 127 Query: 122 MFLPG--------------DWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALN 167 + + + +KD + L+ R+++IL+ LA G+ NKEI AL Sbjct: 128 HPMSPYLMDLAVDWHASEQEEESPADKDDESDAFLTRREQQILSCLAQGQGNKEISNALF 187 Query: 168 ISTGTVKAHLESLYRRLEVKNRTQAAMMLNI 198 IST TVK H+++++++LEVK+R +A + Sbjct: 188 ISTETVKTHIKNIFKKLEVKSRLEAVIAAKE 218 >UniRef50_A9U6E4 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U6E4_PHYPA Length = 563 Score = 239 bits (612), Expect = 4e-62, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 74/206 (35%), Gaps = 14/206 (6%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + ++ L+++ + A ++ + LV++D D Sbjct: 358 IRLLVVDDHPVIRESLRTLLEEQQDFQVVGTAEDGEQAIELCRQLRPQLVLMDVDMPIVD 417 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + +P +++LI T + + E + V + + A + + G Sbjct: 418 GISASRTIKESWPHIRILILTTFEDTKQALEALRSGVDGYLLKSMQPLELAETIRTVHRG 477 Query: 121 MMFLPGDWRTTPEKD--------------IKDLKSLSARQREILTMLAAGESNKEIGRAL 166 + L+ R+ EIL ++ G K I Sbjct: 478 GTLIEQGMSHKLFAQLEADNSGDDPSSIKASSAYDLTPRELEILQFVSKGLRYKSIASNF 537 Query: 167 NISTGTVKAHLESLYRRLEVKNRTQA 192 +S GTV+ + S Y +L V+NR +A Sbjct: 538 YLSDGTVRNYASSAYLKLGVRNREEA 563 >UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYF0_9SPHI Length = 218 Score = 239 bits (611), Expect = 5e-62, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 82/208 (39%), Gaps = 12/208 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++ + D +F G+ L+ + GA EL K+++ P ++++D Sbjct: 3 VKVAIADDHVLFRKGLVTILELDDNIEVVYGADNGKELIDKVDAQPPDVILMDLKMPVMD 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + ++PEVKVL+ + ++++ + + +++ + A+ + Sbjct: 63 GMEATKIIKAKYPEVKVLVLSMYDEEKFIIHCLELGANGYLLKNTDPDELVHAIGTVMAK 122 Query: 121 MMFLPGDW------------RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNI 168 + R + ++ L+ R++E+L ++ + E+ L I Sbjct: 123 DFYFNNHISTVMLKGLNQKKRAKGKPQFENSIELTKREQEVLELICKELTTPEMAEKLFI 182 Query: 169 STGTVKAHLESLYRRLEVKNRTQAAMML 196 S TV+ H ++L + KN + Sbjct: 183 SNRTVEGHRKNLLEKTGAKNTAGLVVFA 210 >UniRef50_B4D5C2 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5C2_9BACT Length = 213 Score = 239 bits (611), Expect = 6e-62, Method: Composition-based stats. Identities = 42/196 (21%), Positives = 89/196 (45%), Gaps = 1/196 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G++ L+ I A+ E ++ ++ + ++D Sbjct: 7 IRVMLVDDHFAILMGLRACLKPEGDIAVIAEAADGGEAIEQYRAHLPDITLMDLSLPRLD 66 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ +FPE +++ T + + + + V ++ + A+ + G Sbjct: 67 GVAAIRTICREFPEARIIALTTRQGDDDIHQALSAGARSYVMKNMPRQEMLRAIRAVHDG 126 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 +LP + +T + K L+ R+ E++ +LA G SNKEIG AL I+ T K H+ L Sbjct: 127 QEYLPQEVQTALLQHEKR-APLTPRELEVIRLLARGCSNKEIGMALGIAEITAKIHVSHL 185 Query: 181 YRRLEVKNRTQAAMML 196 ++ V +R+QA M Sbjct: 186 LSKMGVLDRSQAVMEA 201 >UniRef50_B8GAC9 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexus RepID=B8GAC9_CHLAD Length = 213 Score = 238 bits (610), Expect = 6e-62, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 81/201 (40%), Gaps = 7/201 (3%) Query: 3 IVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCY 62 I++ D ++ G+++ L+ + V + A + + + L++LD Sbjct: 4 ILLVDDHAVLRAGLRLLLESQPDMVVVGEAEDSRTAITQATTLQPDLILLDLSLTNSSGL 63 Query: 63 WLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMM 122 +Q P+ ++L+ ++ ++++ + V + + A+ + G + Sbjct: 64 AAIQSLRAAAPQARILVLTMHDDEGYVRQALAAGAHGYVLKRAADAELIAAIRAVLRGEL 123 Query: 123 FLPGDWRTTP-------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKA 175 ++ + +SLS R+RE+L ++A G + EI LN+S TV+ Sbjct: 124 YIHPALTRRLLEDILPQPQPTNPWESLSEREREVLVLVARGYTAAEIAGQLNLSPKTVET 183 Query: 176 HLESLYRRLEVKNRTQAAMML 196 + +L +++R Sbjct: 184 YRTRGMEKLGLRSRAALVQFA 204 >UniRef50_UPI00017468E1 two-component response regulator n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017468E1 Length = 210 Score = 238 bits (610), Expect = 6e-62, Method: Composition-based stats. Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 1/193 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D + G+ SL + + A A E ++ +V++D Sbjct: 8 VRILLVDDHFVVRSGLAASLGLEEDLLVVAEAGSAAEALTACAAHTPDVVIMDLQLGEVN 67 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ P +++L+ ++ + I L + + + E A+ + +G Sbjct: 68 GITCTEQLGQAHPGIRILVFSSFARDEDVYRAIRAGALGYLQKSAPREDLLKAIRTVGLG 127 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 +LPGD + + + S R+RE+L +A G SNKEI L +S TVK H+ ++ Sbjct: 128 KRYLPGDIAQRLAERLGRPEP-SPREREVLAQMAKGRSNKEIASVLGLSEETVKRHVSNV 186 Query: 181 YRRLEVKNRTQAA 193 +L ++RTQA Sbjct: 187 LEKLGAQDRTQAV 199 >UniRef50_D0LYS4 Two component transcriptional regulator, LuxR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS4_HALO1 Length = 212 Score = 238 bits (610), Expect = 6e-62, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 85/203 (41%), Gaps = 7/203 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I + D ++ GM+ L Q + AS E + ++ +++LD + Sbjct: 2 IKIAIADDHALLREGMRRMLSQSELIEVVGEASNGAEAVEVVKEKAPDVLLLDITMPVKD 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + K+LI + ++++ + + + + +E A+ G Sbjct: 62 GIEATADILALNVNTKILILSMHADEQYALRTLRAGANGFISKGARLEELLKAITDVHEG 121 Query: 121 MMFLPGDWRT-------TPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 +LP T P+ + +++LS R+ +++T LA G +N+EI L IS TV Sbjct: 122 QRYLPDKIATSFAERHIRPDAEKPLVETLSKREFQVMTHLAQGMTNREIAGVLQISVKTV 181 Query: 174 KAHLESLYRRLEVKNRTQAAMML 196 H + ++LE++N + Sbjct: 182 DTHRSHVLKKLELRNNSDITRFA 204 >UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTE0_9BACI Length = 219 Score = 238 bits (610), Expect = 6e-62, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 77/206 (37%), Gaps = 11/206 (5%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 +I++ D +F G+K L I A + + ++++D G Sbjct: 4 RIMLVDDHPVFRSGLKHILCTEADYHVIAEADDGESAIEMAAEANPDIIIMDISMPGLDG 63 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 + ++ + P++++L+ ++ +L+E + V + + AV G Sbjct: 64 IEVTREIKRKIPDIRILMLTMYADEAFLKESLDAGASGYVLKRAVDTELVHAVKLVMNGE 123 Query: 122 MFLPGDW-----------RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIST 170 ++ + D LS R++E+L +A G + KEI L IS Sbjct: 124 HYIYPTLIPKLYHANQPQQDAVSPDSNQAVELSQREQEVLKYIALGYTQKEISTELFISI 183 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 TV + + + ++ K ++ Sbjct: 184 KTVDTYKKRVMEKIGSKKKSALVRYA 209 >UniRef50_B2JVJ8 Two component transcriptional regulator, LuxR family n=16 Tax=Proteobacteria RepID=B2JVJ8_BURP8 Length = 219 Score = 238 bits (610), Expect = 6e-62, Method: Composition-based stats. Identities = 42/203 (20%), Positives = 80/203 (39%), Gaps = 7/203 (3%) Query: 3 IVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCY 62 +++ D ++F G+ +Q + AS +V++D + Sbjct: 7 VLLIDDHALFRKGVAQLIQMNPAFRVVGEASSGRVGVDLAVRLKPDVVLIDLNMPDMNGI 66 Query: 63 WLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMM 122 L+ + + L+ N+R + + + +D E L + A G Sbjct: 67 ETLEMMRQHGVDARFLMLTVSDNERDVVAALRAGASGYLLKDMEPEELCLNLQKALQGTA 126 Query: 123 FLPGDWRTTP-------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKA 175 L + + +LS R++E+L L G NKEI R L+IS GTVK Sbjct: 127 VLSEAVTGKLFHALSAGQPLPANQSNLSVREQEVLDYLVEGMCNKEIARKLDISVGTVKV 186 Query: 176 HLESLYRRLEVKNRTQAAMMLNI 198 H++ L +L++ +R +A + + Sbjct: 187 HVKHLLHKLDLHSRVEAVVWHHE 209 >UniRef50_A8ZMB6 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZMB6_ACAM1 Length = 215 Score = 238 bits (609), Expect = 7e-62, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 86/209 (41%), Gaps = 11/209 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +QI++ D Q + G+ L+ A+ E ++ ++++D Sbjct: 3 IQILLVDDQYLIREGIASLLELEEDLEVAGMAANGKEAIKQAIDLKPNIILMDIRMPELN 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 K P ++++ T ++ + + + + +D + A+ A G Sbjct: 63 GVEATAKIKQSLPHCQIIMLTTFDDEELIVQSLLAGACGYLMKDIPPDDLGQAIKLADAG 122 Query: 121 MMFLPGDWRTTP-----------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIS 169 + L + + L+ R+ E+L +LA G +NKEI +A N+S Sbjct: 123 VFQLAPEVAGKLIGSLKTQRAGDAPKLPTDTPLTTRELEVLKLLAKGNTNKEIAKAFNLS 182 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMMLNI 198 GTVK H+ ++ RL +++RTQAA+ Sbjct: 183 EGTVKNHVSNILMRLGLRDRTQAAVYAVE 211 >UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVU6_9BACT Length = 216 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 42/203 (20%), Positives = 82/203 (40%), Gaps = 8/203 (3%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 +I++ D S+F GM+ L + + AS +E L + +V +D G Sbjct: 5 RIILVDDHSLFRSGMRGLLDRYDGIRVVGEASTGEEFLAMLPATEADVVFMDFAMPGMNG 64 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 +K + P +KV+ + ++ + ++ + +DS ++ A+ + A G Sbjct: 65 AETTEKALALEPGLKVITLSMFGDENYYSRMVQAGAKGFLMKDSPMDEVLRAIETVAAGG 124 Query: 122 MFLPGDWRTTPEKDIKDL--------KSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 + + + ++ + LS R+ EIL + G SN+EI L IS TV Sbjct: 125 TYFCEEVLRSLASRMQTAVSGYEGSDERLSTREIEILVCVCRGLSNQEIADELFISKRTV 184 Query: 174 KAHLESLYRRLEVKNRTQAAMML 196 H ++ + KN + Sbjct: 185 DKHRANILEKTGCKNTASLVVYA 207 >UniRef50_P31802 Nitrate/nitrite response regulator protein narP n=142 Tax=Bacteria RepID=NARP_ECOLI Length = 215 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 75/199 (37%), Gaps = 6/199 (3%) Query: 3 IVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCY 62 +++ D + G++ L+ + A +++LD + G Sbjct: 9 VMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGL 68 Query: 63 WLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMM 122 L +++I + +I + +DS E A+ + A G Sbjct: 69 DTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSK 128 Query: 123 FLPGDWRTTPEK------DIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAH 176 + + L+ R+ ++L LA G SNK+I LNIS TVK H Sbjct: 129 VFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVKVH 188 Query: 177 LESLYRRLEVKNRTQAAMM 195 + +L R+L V++R A ++ Sbjct: 189 IRNLLRKLNVRSRVAATIL 207 >UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiaceae RepID=Q1LEP5_RALME Length = 214 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 82/204 (40%), Gaps = 5/204 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D ++ +G++ L++ + A++ E+ Q + +++LD G Sbjct: 2 IRVIIADDHTVVRNGLRHILERTSDFEVVGEAARGTEVPQLVRELSPHVILLDLSMPGRN 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L+++ P +++L+ ++++ + ++S A+ A G Sbjct: 62 GLELIRQLRTDHPALRILVLTMHAEEQYVVRAFRAGAAGYLTKESAATELVEALRKVAAG 121 Query: 121 MMFLPGDWRTTPE-----KDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKA 175 ++ K + LS R+ E+ + GES +I AL +S TV Sbjct: 122 GTYVSPAMAEKLALGLQEKPDAPHEGLSDRELEVFRRIVDGESLTQIAAALCVSAKTVST 181 Query: 176 HLESLYRRLEVKNRTQAAMMLNIS 199 + L +L++++ + Sbjct: 182 YKMRLMEKLQLRSDAALVRYAIEA 205 >UniRef50_C2RNB5 Two-component protein Kinase n=1 Tax=Bacillus cereus BDRD-ST24 RepID=C2RNB5_BACCE Length = 304 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 80/209 (38%), Gaps = 11/209 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++ + D S + L + A ++ + +V++D + Sbjct: 91 IRLCIVDDHSFIRESLHTILSGLEDLQVVGMAEDGEQALELCGRLKPDVVLMDLEMPNLD 150 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + ++PE++VLI +T N +E+I V + A ++ G Sbjct: 151 GIHATKMIKKRWPEIRVLILSTFQNTERAKEIIRNGADGYVLKSIDSRELAESIRLVYRG 210 Query: 121 MMFLPGDWRTTPEKDIKDLK-----------SLSARQREILTMLAAGESNKEIGRALNIS 169 + D ++ K+ LS R+ EIL +L+ G K I L +S Sbjct: 211 GAMITHDLFHRMWEENKETGLFESRSDGIEYGLSKRELEILELLSQGSRYKTIASTLYLS 270 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMMLNI 198 GTV+ + +LY +L VKNR +A Sbjct: 271 NGTVRNYASNLYEKLGVKNREEAVQKAKD 299 >UniRef50_Q1IK52 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=Q1IK52_ACIBL Length = 211 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 35/199 (17%), Positives = 85/199 (42%), Gaps = 1/199 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I+ + + G+ + + V + A+ + + ++ + ++D G Sbjct: 9 IRILSVEDHPVVREGLVSIIGSQPDMVLVAQATNGSDAIAQFRTHHPDITLMDLRLPGIS 68 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L +FP +V+I T + + + A + + + + S G Sbjct: 69 GTDALISIRGEFPRARVIILTTSDSHTEIDRALRAGAAAYILKSMPMNEMLAVIRSVHAG 128 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 +P + + ++I + +SL++R+ E+L ++ G NK+I L+IS TV H++++ Sbjct: 129 ARHIPQEVASRLAENIGE-ESLTSRELEVLHLIRDGHRNKQIADELSISETTVNFHIKNI 187 Query: 181 YRRLEVKNRTQAAMMLNIS 199 ++ +RT A + Sbjct: 188 VGKMGANDRTHAVTIAVRR 206 >UniRef50_B4CV47 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CV47_9BACT Length = 209 Score = 237 bits (607), Expect = 1e-61, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 80/196 (40%), Gaps = 1/196 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + +++ D + G+ ++L+ + A +E+ + +V+LD G Sbjct: 6 IGVLLVDDHFMVRRGLAVALRVEKDLAVVAEAGNCEEMLAAYRQHRPDVVLLDWRLPGPN 65 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + P +VL+ + + + V + + A+ + G Sbjct: 66 GAEATALLREEHPGARVLMLSALDGDEHIHLAVRAGAAGYVLKSAERGEIIQAIRAVHGG 125 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 + + ++ +S R+RE+L AAGE NKEIG L IS TVK + + Sbjct: 126 KSYFSPGLEALLHDRARKVE-ISPREREVLVRAAAGERNKEIGDHLGISEATVKVFMARI 184 Query: 181 YRRLEVKNRTQAAMML 196 +++L+ ++R A ++ Sbjct: 185 FQKLDARDRAHAVVIA 200 >UniRef50_C5C8Q1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Micrococcus luteus NCTC 2665 RepID=C5C8Q1_MICLC Length = 227 Score = 237 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 80/214 (37%), Gaps = 16/214 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D Q + +++ + + + E + + +V++D Sbjct: 5 LRILIADDQPLMSGALRVLVGSAPGMTCVGVVANGVEAVEACAAIEPDVVLMDMQMPLMD 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ P ++VL T ++ +L + + +D+ A+ + G Sbjct: 65 GVEATRRIKDTHPAIRVLAITTFTSEDYLVPALRAGAGGYLLKDAEPPAILGAIQAVHRG 124 Query: 121 MMFLPGDWRTTP----------------EKDIKDLKSLSARQREILTMLAAGESNKEIGR 164 L + D L+ R+ +L +LA G+SN EI Sbjct: 125 ESVLSPAVAAKLLASIERDRPTVGPTSVQPGSPDGSDLTERELGVLRLLARGQSNPEIAA 184 Query: 165 ALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNI 198 L +S TVKA+L + +LEV++R Q + Sbjct: 185 NLFVSESTVKANLTRIMAKLEVRDRVQLIIRAAQ 218 >UniRef50_C1XS11 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XS11_9DEIN Length = 204 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 1/199 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D I G+K L + A +E K + LV+LD Sbjct: 3 LRLLIVDDHPIVREGLKAFLGLYADLEVVGEADSGEEALSKSRALSPDLVLLDLQLSDGH 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L + + KVLI + + L++ + + + + + +A G Sbjct: 63 GLSFLPRFLSLPNPPKVLILTSFLEEDRLRQALSLGASGYLVKHAGPVALLEGIRAAGRG 122 Query: 121 MMFLPGDWRTTPEKDIK-DLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLES 179 + L + + L SL+ ++RE+LT LA G SNK I +AL +S T+K H+ S Sbjct: 123 EVPLDPAAVRLLARPARNPLASLTPKEREVLTHLARGMSNKAIAQALGVSEKTIKTHVSS 182 Query: 180 LYRRLEVKNRTQAAMMLNI 198 L +L +K RTQAA++ Sbjct: 183 LLAKLNLKGRTQAALLARE 201 >UniRef50_A9U739 Predicted protein n=2 Tax=cellular organisms RepID=A9U739_PHYPA Length = 214 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 83/206 (40%), Gaps = 7/206 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D Q + + + I L + A +E + E +V++D + Sbjct: 4 IKVLLADDQELILESLHIVLSMEPDLEIVGLARNGEEAVKGCEQLMPDMVLMDVNMPVMD 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + P K+++ + ++ + + + + A + G Sbjct: 64 GVAATALIKERMPATKIIMLTSYKEVEYVLAALSHGAEGYLLKAIHPKDLAAGIRVVQAG 123 Query: 121 MMFLPGDWRTTPEKDIKDLKS-------LSARQREILTMLAAGESNKEIGRALNISTGTV 173 + + + K++ L+AR+ E+L LAAG N+EI AL +S GTV Sbjct: 124 GTLISQEMASKMIKNMNSATPAKHNEFGLTAREIEVLHKLAAGLRNQEIAEALFLSEGTV 183 Query: 174 KAHLESLYRRLEVKNRTQAAMMLNIS 199 K ++ ++Y +L VK R +A S Sbjct: 184 KNYISTIYSKLNVKGRREATQKARDS 209 >UniRef50_A0NNP3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NNP3_9RHOB Length = 205 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 81/200 (40%), Gaps = 5/200 (2%) Query: 4 VMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCYW 63 ++ D + G++ LQ+ + A+ E ++++D Sbjct: 1 MLADDHELVRDGIRARLQKVADLEVVGEATNGREALTLAHDLRPDVLLMDVSMPVMNGLE 60 Query: 64 LLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMF 123 + PE+ VLI + N +++ V+ + +D + A+ S A G + Sbjct: 61 AATQMRKLLPEIAVLILSVYDNPEYVRGVVQAGARGYILKDISAAEMITAITSVASGGYY 120 Query: 124 LPGDWRTTP-----EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLE 178 T ++D L+ R+R++LT +A G+ NKE+ + L IS TV++H Sbjct: 121 FSSAVGPTLVGAGTSAPVEDPYGLTDRERQVLTAIARGQPNKEVAKELGISVRTVESHRL 180 Query: 179 SLYRRLEVKNRTQAAMMLNI 198 +L ++ KN Q + Sbjct: 181 NLREKVGNKNAAQLYKVAQD 200 >UniRef50_A8LG56 Two component transcriptional regulator, LuxR family n=4 Tax=Actinomycetales RepID=A8LG56_FRASN Length = 244 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 82/208 (39%), Gaps = 9/208 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + +++ D + + G+++ L+ + AS ++ + +V++D Sbjct: 29 VSVLLVDDEELVRVGLRVILESGGEIDVVGEASDGSQVVPLIRENTPDVVIMDIRMPRVD 88 Query: 61 CYWLLQKTVVQFPEVK-VLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 +++ + + +L+ T ++ E + + + + AV + Sbjct: 89 GLAAIREILADVADPPKILVLTTFELDDYVYEALRSGANGFLLKRARPAEIVQAVRTIVS 148 Query: 120 GMMFLPGDWRT--------TPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTG 171 L + + L+ R+ ++L +++ G SN EI L + Sbjct: 149 SESLLFPEAIRYMAGKRPNREAHETMRRAVLTDREADVLRLISEGLSNNEIANRLYLGAQ 208 Query: 172 TVKAHLESLYRRLEVKNRTQAAMMLNIS 199 TVK+H+ S+ +L ++RTQA ++ S Sbjct: 209 TVKSHVSSVLAKLGARDRTQAVIIAYES 236 >UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfobacteraceae RepID=B8FFJ9_DESAA Length = 212 Score = 236 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 82/203 (40%), Gaps = 7/203 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D I G++ ++ I AS E + + ++D G Sbjct: 2 IRVLLADDHVIVRAGLRRIIEDSEDIKVIVEASNGKEAIDLTLEHCPDVAVVDISMPGID 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ + + P++ +LI ++++ I + + + S E A+ G Sbjct: 62 GLEVVSRLHAELPDLPMLILTMHEEEQYVVRAIEAGAMGYMTKKSAPEQLVTAIRKLHSG 121 Query: 121 MMFLPGDWRTTPEKDIKD-------LKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 FL + + L SLS R+ ++L LA+G +N+EI + +IS TV Sbjct: 122 SRFLTEEAAELLALRVSRWSKGGSLLDSLSKRELQVLRHLASGHTNREIADSYHISVKTV 181 Query: 174 KAHLESLYRRLEVKNRTQAAMML 196 + L ++L ++N + Sbjct: 182 DTYRARLLKKLNLRNNADISRFA 204 >UniRef50_A8LHM9 Two component transcriptional regulator, LuxR family n=1 Tax=Frankia sp. EAN1pec RepID=A8LHM9_FRASN Length = 215 Score = 236 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 80/210 (38%), Gaps = 11/210 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++V+ D Q + G+K+ ++ A + +V+LD Sbjct: 2 IRVVVADDQPLVRLGLKVLIETEDDLELTGEAEDGQAALALVRRTRPDVVLLDIRMPVLD 61 Query: 61 CYWLLQKTVVQFP--EVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAA 118 L+ + +V++ T ++ E + V +D+ A+ A Sbjct: 62 GLAALRAITADPALTDTRVVMVTTFELDEYVFEALRNGASGFVLKDTEPADLLRAIRVVA 121 Query: 119 MGMMFLPGDWRTTPEKDIK---------DLKSLSARQREILTMLAAGESNKEIGRALNIS 169 G L + DL SL+ R+RE++ ++ G SN EI L IS Sbjct: 122 AGESLLSPTITRRVIETFARRPAAPAAVDLTSLTVREREVMGLVGLGLSNDEIAARLVIS 181 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 T + H+ + +L ++R Q A++ N + Sbjct: 182 PATARTHVSRVMVKLSARDRAQLAVLANQA 211 >UniRef50_C0GF31 Two component transcriptional regulator, LuxR family n=3 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GF31_9FIRM Length = 218 Score = 236 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 77/190 (40%), Gaps = 7/190 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D ++ G+K ++ I A +E + +V++D G Sbjct: 2 VRVMIVDDHAVVRVGLKSLIELHGDFSVIAEAGSGEEAVEVARETVPDVVVMDVRMPGMS 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + V P+ KV++ + + + I V + + A+ AA Sbjct: 62 GIDACRAIVEAVPDTKVIMLTSYADDEAIYSAILAGASGYVLKQTDNAKLLEAIEQAARN 121 Query: 121 MMFLPGDWRTTPEKDIKDLKS-------LSARQREILTMLAAGESNKEIGRALNISTGTV 173 L K +K++ + LS +++IL ++A G+ NKEI L ++ TV Sbjct: 122 ESLLDPHVTGKVLKRMKEIAAATQYEAKLSETEKKILVLIAEGKRNKEIAEELFLAEKTV 181 Query: 174 KAHLESLYRR 183 + ++ ++ + Sbjct: 182 RNYVSKIFSK 191 >UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, putative n=2 Tax=Shewanella RepID=B8CN77_SHEPW Length = 206 Score = 236 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 85/198 (42%), Gaps = 2/198 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D +F G++ L + A + + L P LV+ D + Sbjct: 2 IRVLLVDDHPLFREGLRYRLSLDSDIEVLAEADNGQQALEILNKMPVDLVLTDINMPQMD 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +LL+ Q KV++ + NK ++ + + + +D + A+ A G Sbjct: 62 GMYLLELIKEQELSCKVVMLSMHDNKEYIMATMRYGADGYILKDVPGKELIEAIKKVAAG 121 Query: 121 MMFLPGDWRTTPEKDIKDLKS--LSARQREILTMLAAGESNKEIGRALNISTGTVKAHLE 178 + D T +++ K ++ R++ +L +++ G +NK I + +++S TV+ H Sbjct: 122 KRYFSADVINTLSQELASGKQALVTQREQLVLRLISLGMNNKRIAQEMDVSVRTVETHKR 181 Query: 179 SLYRRLEVKNRTQAAMML 196 ++ ++L + + Sbjct: 182 NIKQKLMIDSTAGLVRYA 199 >UniRef50_C1YGP4 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Actinomycetales RepID=C1YGP4_NOCDA Length = 225 Score = 236 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 86/219 (39%), Gaps = 20/219 (9%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPE--ALVMLDGDQDG 58 + +++ D Q + G++ L+ + A+ E + L + + ++D Sbjct: 4 VSVLIVDDQILMRQGLRKLLEIEEGVDVVGDAADGVEALEFLSAADPLPDVALVDARMPR 63 Query: 59 EFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAA 118 L+ + ++P+V L+ T + + + + +D E A+ A Sbjct: 64 MDGVALIGRMRAEYPDVPALVLTTFDDDELVFGGLRAGARGYLLKDVPPEELVAAIRRVA 123 Query: 119 MGMMFLPGDWRTTP------------------EKDIKDLKSLSARQREILTMLAAGESNK 160 G L G + LS R+ E+ ++ G +N+ Sbjct: 124 RGETVLGGPAAELLVAALGEGPSTVPAADPPRPPGHGEAPRLSEREEEVARLVGTGATNR 183 Query: 161 EIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 E+ RAL I+ GT K H+ S+ R+L +++RT+ A+ + Sbjct: 184 EVARALFITEGTAKNHVTSILRKLGLRDRTRLALWVRER 222 >UniRef50_C0EEH8 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EEH8_9CLOT Length = 206 Score = 236 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 80/199 (40%), Gaps = 6/199 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D I G+++ L+ + A + + + +V+LD Sbjct: 3 IRVILADDDPIICQGLRMILETQQDIALCGVAENGVQAVELCRTQRPDVVLLDIRMPLLD 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + L+ T ++ + V + ++S + AV + A G Sbjct: 63 GIEAAAQIMQMEAGAP-LLLTTFDEAEFILRALKTGVRGYILKNSPAQRILTAVRAVAEG 121 Query: 121 MMFLPGDWR-----TTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKA 175 D T D L+ R+ E++ ++A G SNKEI L +S GTV+ Sbjct: 122 GTVFQQDILEYIRDRTVFPDHTIFSLLTPREMEVVALIAEGLSNKEIAERLFLSNGTVRN 181 Query: 176 HLESLYRRLEVKNRTQAAM 194 H+ + + +++RTQ A+ Sbjct: 182 HISVILEKTGLEHRTQIAV 200 >UniRef50_B1KE04 Two component transcriptional regulator, LuxR family n=2 Tax=Alteromonadales RepID=B1KE04_SHEWM Length = 206 Score = 236 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 86/199 (43%), Gaps = 3/199 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 M+I + D IF G+ L V + A+ E +K+ + +V++D Sbjct: 1 MRIFIVDDHPIFREGLIARLSMDDDFVIVGQAANGKEALEKMPNLMPDIVLMDISMPEMN 60 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + +FPE+K+LI + +K ++ V++ V +D + A+ G Sbjct: 61 GMDAAEIFKDKFPEIKILILSMHDDKEYVLSVLNRGVRGYALKDISAAEMFYALRVIHNG 120 Query: 121 MMFLPGDWRTTPEKDIKDLKS---LSARQREILTMLAAGESNKEIGRALNISTGTVKAHL 177 ++ + ++ L+ R++ +L +LA+G +NKE+ R L+IS T++ H Sbjct: 121 GIYYSRAISDLLVQSSQEPDKNTVLTTREQTVLRLLASGLNNKELARELDISVRTIETHR 180 Query: 178 ESLYRRLEVKNRTQAAMML 196 ++ +L +K Sbjct: 181 RNIKDKLAIKTSAGLVRYA 199 >UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR family n=18 Tax=cellular organisms RepID=B4SLZ0_STRM5 Length = 217 Score = 236 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 76/197 (38%), Gaps = 2/197 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + +++ D + G+ L + + A+ +E + +V++D Sbjct: 8 IGVLVVDDHPLLRDGLAALLGAQPDLRLLGEAADGEEAIACYQRLQPDVVLMDLQMPRLD 67 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + P ++++ T + A + +D + A G Sbjct: 68 GVEAIVRIRALDPRARIIVLTTYRGDVRAVRALQAGASAYLLKDMLRHELVDTIRMVAGG 127 Query: 121 MMF-LPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLES 179 +P + + + LS R+ E+L +A G SNK IG + IS TVKAH++S Sbjct: 128 RRAPIPPAVAASIAAHVVE-DRLSPRETEVLRHVAGGLSNKRIGERMQISEQTVKAHMKS 186 Query: 180 LYRRLEVKNRTQAAMML 196 L +L V +RT A Sbjct: 187 LMDKLGVGDRTHAVTQA 203 >UniRef50_C6CWJ3 Two component transcriptional regulator, LuxR family n=4 Tax=Bacillales RepID=C6CWJ3_PAESJ Length = 235 Score = 236 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 84/222 (37%), Gaps = 24/222 (10%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++ + D GM+ + + + A+ +E +++ LV++D + G Sbjct: 8 IRVFLVDDHPHGREGMREIIGADPEFMVVGEAASGEEAIARIDDVLPDLVLMDINMPGMG 67 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 Q+ +P +K+++ + L E I + ++ + + + + Sbjct: 68 GLEATQQLKYLYPSLKIVMVTVSDDITHLFEAIKRGAQGYLFKNLSPSAWREYLRAVVDD 127 Query: 121 MMFLPGDWRTTPEKDIKDLK------------------------SLSARQREILTMLAAG 156 + + ++ L+AR+++IL + G Sbjct: 128 EAPMSKEIAFRLLQEFTSAASNGIKPAKTGSKPGHAGDASAMTTPLTAREKDILERVVTG 187 Query: 157 ESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNI 198 ESNKEI A +S TVK HL+++ ++L + NR Q Sbjct: 188 ESNKEIAVAFGLSEHTVKNHLKNILQKLHLDNRVQLTRYAYE 229 >UniRef50_B1Y743 Two component transcriptional regulator, LuxR family n=6 Tax=Bacteria RepID=B1Y743_LEPCP Length = 211 Score = 236 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 81/202 (40%), Gaps = 6/202 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 M++ + D + G+K L AS E+ + + + +LD G+ Sbjct: 3 MRVFIADDHPVVRQGLKQLLGAEADFSVAGEASSGHEVIDQCGRFAWDVAVLDYRMPGKG 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L+++ +FP+ VL+ + ++ V+ + ++S E A+ A G Sbjct: 63 GIDLIKELRQRFPDRPVLVLSVCPEDQYAMRVLRAGAAGYLTKESAPEDLVNAIRKVARG 122 Query: 121 MMFLPGDWRTTPE------KDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVK 174 F+ D LS R+ +I+ +LA+G+ EI + L +S T+ Sbjct: 123 GRFVSAALGEQLALSLSTGGDEPLHCRLSDREYQIMWLLASGKKVGEIAQQLFLSPNTIS 182 Query: 175 AHLESLYRRLEVKNRTQAAMML 196 + + + +L++K+ + Sbjct: 183 TYRKRILEKLDLKSNAELMRYA 204 >UniRef50_A6TNJ5 Two component transcriptional regulator, LuxR family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TNJ5_ALKMQ Length = 212 Score = 236 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 88/203 (43%), Gaps = 4/203 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + I++ D +I +G++ +++ A E + K+ +V+LD Sbjct: 6 VTILLVDDHAIVRYGIRSLIERNDGLKVCGEAGTLQEAYHKVSDLKPDIVLLDIKLPDGD 65 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ + P+VKV+I + E + + +D + A+ + G Sbjct: 66 GAAGCREIKKRVPDVKVIILTAYAEDSIILEAVKAGAEGYLLKDIDSKNIITAIRNVVGG 125 Query: 121 MMFLPGDWRTTPEKDI----KDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAH 176 L + + ++ L+++ + IL +++ G+SNK+I + + +S TV+ + Sbjct: 126 KTSLANEAISKVLNEVKQNCSGEDDLTSQDKSILELISQGKSNKDIAKEIYVSEKTVRNN 185 Query: 177 LESLYRRLEVKNRTQAAMMLNIS 199 +++++ NRT+AA+ + Sbjct: 186 ASRIFKKINAGNRTEAAIYWSKR 208 >UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paenibacillaceae RepID=C0ZBD9_BREBN Length = 215 Score = 236 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 85/203 (41%), Gaps = 8/203 (3%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 ++++ D + ++ L I A +E + LV++D + Sbjct: 5 RVLIADDHPMARMAIRSLLDPDPSFEVIGEAQNGEEAFLLCGQIQPDLVLMDINMPKWSG 64 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 ++ +P +KV+I + + L I F + ++ + + +++ Sbjct: 65 LEATREVKKAYPHIKVVILSVSDDVADLITAIQFGAQGYLLKNLEPDDWINYLHALLGED 124 Query: 122 MFLPGDWRTTPEKDIKDLKS--------LSARQREILTMLAAGESNKEIGRALNISTGTV 173 L + T + ++ L+ R+REI+ + AG++N+EI AL I+ TV Sbjct: 125 SELTREMATRLMYRFRQEEATDEMVPAVLTPREREIVMYVGAGKTNREISEALIIAENTV 184 Query: 174 KAHLESLYRRLEVKNRTQAAMML 196 K HL+++ +L++ NR Q A Sbjct: 185 KNHLKNILEKLQLANRVQLAAYA 207 >UniRef50_C4DCC2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DCC2_9ACTO Length = 225 Score = 236 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 77/211 (36%), Gaps = 12/211 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++ ++ D ++ G+ L + A+ + E + + ++D G Sbjct: 2 IRTLIVDDDALVRLGLCDLLDDEPDITVVAQAADGKSAVAQAERHRVDVALMDVRMPGMD 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + +V+ T ++ ++I + +D+ A+ A G Sbjct: 62 GIAATARLRALPEPAQVIALTTFDLDEYVYDMIAAGAAGFLLKDTDPGEIIRAIRVVAAG 121 Query: 121 MMFLPGDWRTTPEKD------------IKDLKSLSARQREILTMLAAGESNKEIGRALNI 168 L + + L+ R+ ++L LA G +N EI +L++ Sbjct: 122 DAMLHPAAARRLIERYHRAARPRATAVRHRVDRLTPRETDVLRHLALGATNAEIAASLSM 181 Query: 169 STGTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 TVKAH+ + L+V NR QAA+ + Sbjct: 182 RESTVKAHVTRILATLDVTNRVQAALCARDA 212 >UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04VJ6_LEPBJ Length = 221 Score = 236 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 87/212 (41%), Gaps = 16/212 (7%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 +I + D +I G+K+ L + + A++ ++ LV+ D G Sbjct: 7 KIFLVDDHAILREGLKMILSGQ--FEICGESGDAEKALDQIGKLNPDLVITDISMPGLSG 64 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 L++ Q+P ++ +I + N+ ++Q+++ + V +D A+ + G Sbjct: 65 IDLVKNLRKQYPNIRTIILSRHDNREYVQKLLELGINGYVLKDDAGNDLLRAIEAVHKGE 124 Query: 122 MFLPGDWRT--------------TPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALN 167 +L + K LS R+REIL ++A G SN+ IG+ L Sbjct: 125 TYLSPGITAHFLSGFVGSGKPGEENQDAKKAFSVLSDREREILKLVAEGNSNESIGKILG 184 Query: 168 ISTGTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 IS TVK H ++ ++L + M + Sbjct: 185 ISPATVKVHRANIMKKLNLHKVADLVMYAIRA 216 >UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=Flavobacteriales RepID=A0M4P6_GRAFK Length = 205 Score = 236 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 85/197 (43%), Gaps = 1/197 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++V+ + + I G+K+ + + A+ EL + L++ D Sbjct: 2 IRLVIAEDHTALIDGIKVFFEYEEDIEFVGFANNGQELIELTRRKKPNLIITDIRMPVMD 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ + +FP +K++ + + +Q+++ + ++S+++ A+ G Sbjct: 62 GIQATKEILEEFPNIKIIAFSMFDQDKAVQQMLEAGASGYILKNSSLKELLYAIRKVHEG 121 Query: 121 MMFLPGDWRTTPEK-DIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLES 179 + + + K L+ RQREIL ++ G +N+EI L I TV+ H ++ Sbjct: 122 EHYYDPNITVKQKSVSPKSKAVLTGRQREILKLIGQGRTNQEIADQLFIGKTTVETHRKN 181 Query: 180 LYRRLEVKNRTQAAMML 196 + R+L ++ + Sbjct: 182 MIRKLGLQGAGELLRYA 198 >UniRef50_C7QC31 Two component transcriptional regulator, LuxR family n=95 Tax=Actinobacteria (class) RepID=C7QC31_CATAD Length = 236 Score = 236 bits (604), Expect = 4e-61, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 81/211 (38%), Gaps = 14/211 (6%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 ++V+ D Q + G+++ + + + A+ + + +V++D G Sbjct: 15 RVVLADDQDLVRAGLRLMIDRAPGLAVVGEAATGHDAVRIAREARADVVLMDIRMPGLDG 74 Query: 62 YWLLQKTVVQF--PEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 ++ V+VLI T ++ E + + + + + A+ + A Sbjct: 75 LAATRRIAADDSLAGVRVLILTTFEVDDYVFEALRSGASGFLGKGARPDALIDAIRTVAR 134 Query: 120 GMMFLPGDWRT------------TPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALN 167 G L P L +L+ R+RE+ ++A G SN +I R L Sbjct: 135 GDALLSPSATRGLIARFLSLQDTEPVHPSPLLTTLTDRERELTALVADGMSNTDIARQLT 194 Query: 168 ISTGTVKAHLESLYRRLEVKNRTQAAMMLNI 198 +S TVK H+ +L ++R Q ++ Sbjct: 195 LSPLTVKTHVNHAMTKLGARDRAQLVVLAYQ 225 >UniRef50_C8VWU8 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VWU8_DESAS Length = 216 Score = 236 bits (603), Expect = 4e-61, Method: Composition-based stats. Identities = 44/203 (21%), Positives = 90/203 (44%), Gaps = 8/203 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++V+ D Q++ G++I L + + A + + + + + +LD Sbjct: 4 IRVVIADDQNLICDGIRIILDSQPDMEVVGIADNGQKAVEFVSACQPDVALLDISMPVMS 63 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L++ V +P+ VL+ T ++ + +D T E +A+ +A G Sbjct: 64 GIEALKEIKVNYPKTVVLMLTTFDPDEYIIGAFRSGADGYLLKDMTAEKLVVAIRNAFNG 123 Query: 121 MMFLPGDWRTT--------PEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 + +P + +K+ L+ R+ EI ++A G SN+ I L IS GT Sbjct: 124 NVTMPASIASRIIVHIHEDVKKNSLQDYGLTQREIEIAGLMARGFSNELISITLGISLGT 183 Query: 173 VKAHLESLYRRLEVKNRTQAAMM 195 VK ++ +Y +LE +R +A ++ Sbjct: 184 VKNYISVIYSKLEANSRQEAILV 206 >UniRef50_Q7NN43 Two-component response regulator n=2 Tax=Gloeobacter violaceus RepID=Q7NN43_GLOVI Length = 217 Score = 236 bits (603), Expect = 4e-61, Method: Composition-based stats. Identities = 44/204 (21%), Positives = 90/204 (44%), Gaps = 8/204 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ + +F G+ + L+ + + A + + LV+LD G Sbjct: 5 VRVLLVEDDPLFRMGLAMVLRHQPQIELVAEAEDGETALALANRHRPQLVLLDIGLPGLD 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L + + PE++VL+ + +Q ++ + + + + G Sbjct: 65 GRQTLVRLKQEHPEIRVLVLTSREEAGLVQAMLQAGADGYCLKGIGPDRLLTVIREVSAG 124 Query: 121 MMFLPGDWRT--------TPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 + P + + +L+ R+RE+L +A G SN EIGR L+IS+GT Sbjct: 125 NGWFDAKVLAQVRSAFAVAPSEPPANAAALTEREREVLGWIARGASNPEIGRQLHISSGT 184 Query: 173 VKAHLESLYRRLEVKNRTQAAMML 196 V+ H+ ++ R+L +RTQAA++ Sbjct: 185 VRVHVHAILRKLGATDRTQAAVLA 208 >UniRef50_C8WS10 Two component transcriptional regulator, LuxR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WS10_ALIAD Length = 224 Score = 236 bits (603), Expect = 5e-61, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 84/202 (41%), Gaps = 5/202 (2%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQD-GEF 60 ++V+ D ++ G+++ L + S ++ + ++++D G Sbjct: 5 RVVIVDDHALVRQGLRLILHGVAGIEVVGECSCGEDALKAAVKDRPDVMLMDVHMPQGLD 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + P+V+V++ ++ +++++ V IV + A+ G Sbjct: 65 GITTARHLRQIAPQVRVIMLTMFDDRVHVEKMLDAGVSGIVFKHDDSSEIVAAIQHGQPG 124 Query: 121 MMFLPGDWRTTPEKD----IKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAH 176 +L W + + + LS R+ E+L +LA G +N+E+ AL+IS TV+ H Sbjct: 125 HPYLSRRWGQRANAETVSPSRTAERLSPRETEVLVLLAQGYTNREVADALHISVKTVETH 184 Query: 177 LESLYRRLEVKNRTQAAMMLNI 198 + + RR+ + +R Sbjct: 185 RQHIMRRIGLHSRAALVRYAYQ 206 >UniRef50_B5JLS2 Response regulator receiver domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLS2_9BACT Length = 209 Score = 235 bits (602), Expect = 5e-61, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 86/196 (43%), Gaps = 1/196 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + +++ D F G++ L + + A+ E + + + +LD + E Sbjct: 5 ITLLVVDDHPAFRAGLRSMLSEAPNLEVVAEAASVQETLDLHQQHAPDVTLLDLNLKKES 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + + + +V++ +T + A + +DS+ A+ + G Sbjct: 65 GIDAITQLLAIKADTRVIVLSTFDMSEDIHLAFKAGARAYLLKDSSRSEIIQAIEAVYAG 124 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 +P + + L+A++ EIL ++ G NKEI L I+ TVK HL+++ Sbjct: 125 ERVIPPAIKQRLLEQRSRPA-LTAKELEILELVVQGRRNKEIAADLGITEFTVKGHLKTV 183 Query: 181 YRRLEVKNRTQAAMML 196 + +L+V +RT+AA+ Sbjct: 184 FLKLQVSDRTEAAIKA 199 >UniRef50_D2PZN7 Two component transcriptional regulator, LuxR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PZN7_9ACTO Length = 242 Score = 235 bits (602), Expect = 5e-61, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 84/213 (39%), Gaps = 16/213 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++V+ D Q++ + L + A +E +V++D G Sbjct: 16 LRVVLADDQALLRGAFRTLLDSTDDIAVVGEAGDGEEAVALTRRTHPDVVVMDIQMPGMD 75 Query: 61 CYWLLQKTVVQFPEV---KVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSA 117 + P++ +VLI T ++ + + + + + AV + Sbjct: 76 GLTATAQICA-DPDLRASRVLILTTYETDEYVAQALRAGASGFIGKGIDADGLIDAVRTI 134 Query: 118 AMGMMFLPGDWRTTP------------EKDIKDLKSLSARQREILTMLAAGESNKEIGRA 165 A G L + +D++ L +L+ R+RE++ ++A G SN EI Sbjct: 135 ADGDALLSPAATRSLVARFLATPVDTAPRDVERLVALTPREREMVALVATGLSNLEIADR 194 Query: 166 LNISTGTVKAHLESLYRRLEVKNRTQAAMMLNI 198 + +S TV+AH++ +LE ++R Q + Sbjct: 195 MYVSPFTVRAHVQRAMTKLEARDRAQLVAIAYR 227 >UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6ADI3_LEIXX Length = 207 Score = 235 bits (602), Expect = 5e-61, Method: Composition-based stats. Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 2/198 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDG-E 59 ++IV+ D I HGM+ L + + +E L+S +V++D G Sbjct: 2 IRIVLVDDHPILRHGMRTLLDTQEDFEVVGDCGDPEEYRLLLKSARPDIVLMDLALGGDT 61 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 L T P VL+ T + + + +DST A+ +A Sbjct: 62 DGVALTAHTRATSPSTAVLVFTTYDSDADFVRSLDAGASGYLLKDSTPVELFAAIRTARD 121 Query: 120 GMMFLPGDWRTTPEKDIK-DLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLE 178 G L + ++ +SL+ R+ E+L +LA G +N+++G L +S TVK H+ Sbjct: 122 GGSALSPAVASRLMDRMRAPQESLTPREIEVLALLATGRTNRQVGERLFVSETTVKTHVN 181 Query: 179 SLYRRLEVKNRTQAAMML 196 ++ +L V R A Sbjct: 182 HIFTKLGVDTRAAAVSRA 199 >UniRef50_Q5WJ71 Two-component response regulator n=5 Tax=Bacillaceae RepID=Q5WJ71_BACSK Length = 210 Score = 235 bits (602), Expect = 5e-61, Method: Composition-based stats. Identities = 45/203 (22%), Positives = 93/203 (45%), Gaps = 10/203 (4%) Query: 3 IVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCY 62 I++ + Q I G+K+ ++ R I A E + LV++D Sbjct: 4 ILLAEDQQIVRQGLKMMIEHRQRYQVI-EAENGQEAVDLAGRHVIDLVLMDVRMPVMTGI 62 Query: 63 WLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMM 122 ++ + + P VK+++ T ++R+ E + + +D+ +E+ + A +G + Sbjct: 63 EATKRLIERDPNVKIVMLTTFIDERYAIEALKAGAKGYILKDADMESLFATIEKALLGEL 122 Query: 123 FLPGDWRTTP---------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 L G ++ + + L+ R++EI+ ++ G +N EI L +S GTV Sbjct: 123 VLDGQVAAKVMPKLLQHSAPQEKEQIPPLAEREKEIIRLVGQGRNNAEIAAELYLSVGTV 182 Query: 174 KAHLESLYRRLEVKNRTQAAMML 196 K ++ L+ +L V++RTQ A+ Sbjct: 183 KNYISQLFIKLGVRDRTQLAIFA 205 >UniRef50_A8L345 Two component transcriptional regulator, LuxR family n=33 Tax=Bacteria RepID=A8L345_FRASN Length = 249 Score = 235 bits (602), Expect = 6e-61, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 83/212 (39%), Gaps = 16/212 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++V+ D Q I G+++ L + V + A + + ++D Sbjct: 23 IRVVVADDQEIVRTGLRMILDAQPGIVVVGVAVDGRRAVELARRLRPDVCLIDIRMPVMD 82 Query: 61 CYWLLQKTVVQFPEV----KVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS 116 P V V++ T ++ + + +D+ + A AV++ Sbjct: 83 GIQATLAL--AGPGVADPLAVVVITTFDLDEYVYAALRAGARGFLLKDAGPDLLAQAVHA 140 Query: 117 AAMGMMFLPGDWRTTPEK----------DIKDLKSLSARQREILTMLAAGESNKEIGRAL 166 AA G + + + +++L+ R+ ++L +A G +N EI L Sbjct: 141 AACGDALIAPNVTARLLATFAGSGPAPVPAQPVEALTDREEQVLATVAGGRTNSEIAADL 200 Query: 167 NISTGTVKAHLESLYRRLEVKNRTQAAMMLNI 198 +IS TVK H+ SL +L +NR + A+ Sbjct: 201 HISLSTVKTHIASLMAKLGARNRVEIALWAYQ 232 >UniRef50_A5G586 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=A5G586_GEOUR Length = 226 Score = 235 bits (601), Expect = 7e-61, Method: Composition-based stats. Identities = 41/205 (20%), Positives = 81/205 (39%), Gaps = 9/205 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D I G+K L + A+ E +K + +V++D Sbjct: 13 IRVLLVDDHKIMRKGLKAILALEHTIEVVAEAANGREAIRKADELLPDVVVMDLTMPEMN 72 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +++ V P+V+ L+ + ++ + E + +D VE A+++ A G Sbjct: 73 GIEAIRQIVAAHPDVRTLVLSMVLDRACVMETFKAGATGYLLKDCAVEELVGAIHTVASG 132 Query: 121 MMFLPGDWRTTPEKDIKDLK---------SLSARQREILTMLAAGESNKEIGRALNISTG 171 +L + +D LS R+RE+L ++A G S KEI +S Sbjct: 133 EPYLCPQITSLVIRDYTKGADANSSDSCVQLSKREREVLQLIANGNSTKEIAFTFGVSIK 192 Query: 172 TVKAHLESLYRRLEVKNRTQAAMML 196 TV S+ ++L + N Sbjct: 193 TVAVQRMSVMKKLNLFNVADLTKYA 217 >UniRef50_C7MXL4 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=3 Tax=Actinomycetales RepID=C7MXL4_SACVD Length = 239 Score = 235 bits (601), Expect = 7e-61, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 79/205 (38%), Gaps = 7/205 (3%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + + + D I G+ L+ + A+ A E ++ + +LD Sbjct: 3 ISVFLVDDHEIVRRGLTDLLEAEPDMRIVGEAASAGEALARIPGTGADVAVLDVRLPDGN 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L ++ + P ++ L+ + + L I V + AV + G Sbjct: 63 GVELCRELLSTVPGLRCLMLTSYADDEALFNAIMAGASGFVLKQVLGSDLVSAVRTVGSG 122 Query: 121 MMFLPGDWRTTP-------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 L + ++ + LS ++R +L ++ G +N+EI L ++ TV Sbjct: 123 GSLLDSKTTSALMNRIRREREESDPVSGLSEQERAVLDLIGEGLTNREIAARLYLAEKTV 182 Query: 174 KAHLESLYRRLEVKNRTQAAMMLNI 198 K ++ L +L ++ RTQAA++ Sbjct: 183 KNYVSRLLGKLGMQRRTQAAVLATE 207 >UniRef50_D1Y4N4 Two component transcriptional regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y4N4_9BACT Length = 215 Score = 235 bits (601), Expect = 7e-61, Method: Composition-based stats. Identities = 42/196 (21%), Positives = 84/196 (42%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + IV+ D + G+ + + + AS + W+ +E + +LD Sbjct: 2 ISIVLADDHPLTRAGLAALINEEEGLNLLGEASDGKQAWEMIEKLRPDVALLDIRMPEMD 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + +K KV++ + ++ + + + S V A+ S G Sbjct: 62 GITVARKVKDAKLPTKVIMLTAYNAQPYIVAALSAGARGFIVKTSAVMELTQALQSVIGG 121 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 ++L + + +L+ LS R+RE+L + + G KE+ L I+ TV+AHL S+ Sbjct: 122 GIYLDSAIANSVDSASNELEQLSPREREVLLLSSQGFPVKEVAAKLFITERTVQAHLSSV 181 Query: 181 YRRLEVKNRTQAAMML 196 Y + KN+T+A ++ Sbjct: 182 YAKFGAKNKTEALIIA 197 >UniRef50_A1RC88 Two-component system response regulator n=8 Tax=Actinomycetales RepID=A1RC88_ARTAT Length = 218 Score = 235 bits (600), Expect = 8e-61, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 10/209 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESY-----PEALVMLDGD 55 +++++ D + G++ L + AS+ D +L P LV++D Sbjct: 4 IRVLLVDDHPVVRAGLRAMLADFPGVTVVAEASEGDAALVELSKLHTLGEPVDLVLMDLQ 63 Query: 56 QD-GEFCYWLLQKTVVQ---FPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFA 111 G +K P VLI T + + + +D+ E Sbjct: 64 MGSGMDGVTATEKIKAGEGGNPPPPVLILTTYDTDADILAAVEAGASGYMLKDAPPEQIR 123 Query: 112 LAVNSAAMGMMFLPGDWRTTPEKDIK-DLKSLSARQREILTMLAAGESNKEIGRALNIST 170 AV SAA G L + I+ +LS R+ ++L +LA G SN+ + + L IS Sbjct: 124 QAVLSAAAGQTALAPEVAARLMGRIRNPSPALSGREVQLLELLATGMSNRAMAKQLFISE 183 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 TVK HL +Y +L V NRT A + Sbjct: 184 ATVKTHLVHIYSKLGVDNRTAAIAVATQR 212 >UniRef50_B5JTE5 Two-component system regulatory protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTE5_9GAMM Length = 213 Score = 235 bits (600), Expect = 8e-61, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 88/208 (42%), Gaps = 10/208 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++V+ D Q++ HG+ L + A + + +V++D G Sbjct: 2 IRVVIVDDQTLVRHGIANLLGMSDKVEVVGEAGDGESALYLIPQVSPDVVLMDIRMPGLS 61 Query: 61 CYWLLQKTVVQFPEV-KVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 +L+K V++ T ++ LQ+ I + +D T++ ++ Sbjct: 62 GLDVLRKLRASDDNTPPVILLTTFEDQDTLQQAIRLGAKGYLLKDVTLDNLLASLELVMA 121 Query: 120 GMMFLPGDW---------RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIST 170 G + + + D L+AR+ I+ +++ G SNKEI L++ Sbjct: 122 GQSVFDNRINHRTDDVSAASRSQASLGDAYDLTAREVNIIELMSEGASNKEIAFRLDLKM 181 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMMLNI 198 GTVK ++ S+ +L V++RTQA + + Sbjct: 182 GTVKNYVSSVLLKLGVRDRTQAVIKIKE 209 >UniRef50_A1ATT6 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfuromonadales RepID=A1ATT6_PELPD Length = 203 Score = 235 bits (600), Expect = 9e-61, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 68/195 (34%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D +F G+ L + + S + +LD Sbjct: 2 IRVLIADDHVMFRQGLINLLTTAEDIHIAAECGDGATALELIRSLEPDIAVLDITMPKLD 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + + +I + + + +D E A+ + A G Sbjct: 62 GISITRAMGNLGLATRAIILTMHDDPLMYGRAVSAGAHGFILKDDAYEELLSALRTVAAG 121 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 + + + + L+ R+REIL ++A G +N+ I + L IS TV H +L Sbjct: 122 GTAISRAIQHAAIEPEPPVAELTEREREILGLIAHGCTNRMIAQHLGISIKTVNNHRTNL 181 Query: 181 YRRLEVKNRTQAAMM 195 +L + + + Sbjct: 182 MGKLNLHSTAELVRY 196 >UniRef50_D2AWW3 Response regulator receiver protein n=6 Tax=Actinomycetales RepID=D2AWW3_STRRD Length = 221 Score = 235 bits (600), Expect = 9e-61, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 85/210 (40%), Gaps = 11/210 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + + ++ L V + A E + + + +V++D G Sbjct: 2 IRVLIVDDERMVCAQLRTILSAAEDLVVVAEAYDGAEAVEAVVRHRPHVVLMDLHMPGVD 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ V KV++ T ++ + + +D+ E V AA G Sbjct: 62 GLAAIEHIVRFPAPPKVVVLTTFDRDGYVLRAMSLGAAGFLLKDTPPEDLIGLVRVAADG 121 Query: 121 MMFLPGDWRTTP-----------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIS 169 L ++ + + L+ R+ E+LT L G SN +I R L +S Sbjct: 122 HTVLSPAATRRLLTASAGHGAARDRALARIADLTDREVEVLTCLGEGLSNAKIARRLYLS 181 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 T+K+++ + +L NRTQA ++ + + Sbjct: 182 EATIKSYVSRMLVKLGFSNRTQAGLLASEA 211 >UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator receiver n=32 Tax=Betaproteobacteria RepID=Q46VQ7_RALEJ Length = 231 Score = 235 bits (600), Expect = 9e-61, Method: Composition-based stats. Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 7/204 (3%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLES----YPEALVMLDGDQD 57 ++++ D ++ GM++ L + + A + LE LV+ D Sbjct: 20 RVLLIDDHALVRDGMRMHLTLQPDLYVVGEADGGEAALAWLERAGARERPDLVITDIGMR 79 Query: 58 GEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSA 117 G L Q+PE+ VL+ + N + ++ + V +D+ + A+ + Sbjct: 80 GMGGIALTAALHEQYPEIAVLVVSMHDNLEYARQAVRAGARGYVLKDAPADELMAAIEAV 139 Query: 118 AMGMMFLPGDWRTTPEKDIK---DLKSLSARQREILTMLAAGESNKEIGRALNISTGTVK 174 G +F + + L +L+ R+R+IL + G +NKEI L +S TV+ Sbjct: 140 LAGRVFYSARIARGMAEQMPATGPLDALTRRERDILGCIGRGMANKEIATQLGVSVRTVE 199 Query: 175 AHLESLYRRLEVKNRTQAAMMLNI 198 H +L R+L ++ R Sbjct: 200 THRLNLKRKLGIEGRAGLVKYAVE 223 >UniRef50_C1F7G9 Two-component response regulator n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7G9_ACIC5 Length = 213 Score = 235 bits (600), Expect = 9e-61, Method: Composition-based stats. Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 1/196 (0%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G+ L + + AS E LE +V+LD G Sbjct: 9 IRVLIVDDHPVVRAGLTSMLSTKPQLHMLPAASGGAEALTVLEEEQVDVVLLDLKMPGIN 68 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +L + + + +I ++ + I + +D+T E A+ + G Sbjct: 69 GIEVLHRLNNRGALPRTIILSSYEMDEDIYRAIQAGARGYLIKDTTQEEILEAIAAVHAG 128 Query: 121 MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL 180 + LP + I + L+ R+ EIL MLA G +NKEIGR IS T + H+ S+ Sbjct: 129 SLHLPRHIAQRISERIGR-QELTRRETEILEMLAKGLTNKEIGRVFGISENTARNHVNSI 187 Query: 181 YRRLEVKNRTQAAMML 196 ++LEV +RT+AA Sbjct: 188 IQKLEVSDRTEAATTA 203 >UniRef50_C5SGD8 Two component transcriptional regulator, LuxR family n=2 Tax=Caulobacteraceae RepID=C5SGD8_9CAUL Length = 218 Score = 235 bits (600), Expect = 9e-61, Method: Composition-based stats. Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 9/206 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDG-E 59 ++I++ D ++ G+K L + A+ E+ +V++D G Sbjct: 6 LRILIVDDHALAREGLKAVL-TSSGFSVVGEAADGPAAIALTEALCPDVVLMDVRLKGDM 64 Query: 60 FCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAM 119 ++ +VL+ +++E + V +D+ ++ A+ A Sbjct: 65 DGLEATRRIAALGLAARVLMLTLHDLPAYVREALAAGAAGYVLKDTAIDDLQAAIVRVAQ 124 Query: 120 GMMFLPGDWRTTPEKDIKD-------LKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 G LP D + + + L SL+ R+REI+ ++A G +NKEIGR+L IS T Sbjct: 125 GQTALPLDLVSAAMRAPEPVERDPTALSSLTGREREIVHLIAEGMTNKEIGRSLGISPAT 184 Query: 173 VKAHLESLYRRLEVKNRTQAAMMLNI 198 VKAH+E L +L V +RTQAA++ + Sbjct: 185 VKAHVERLIAKLGVTDRTQAAVLASR 210 >UniRef50_A9VLR5 Two component transcriptional regulator, LuxR family n=31 Tax=Bacillaceae RepID=A9VLR5_BACWK Length = 595 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 73/206 (35%), Gaps = 10/206 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D Q ++ L + + A ++ ++++D D Sbjct: 383 IRLLIVDDQPFVRESLRTLLDRYEDLNVVGLAEDGNQAIDLCGRLQPHVILMDLDMQHMD 442 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +K Q+P ++VLI T + E + + + A + G Sbjct: 443 GVEATKKIKQQWPHIRVLIFTTFQDTEQALESLRNGADGFLLKSIETLELANTIRLIHKG 502 Query: 121 MMFLPGDWRTTP----------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNIST 170 + + L+AR+ EIL ++A G I L +S Sbjct: 503 GTLIDQGMSHKIFEKFDEQIETPQSKATAYELTAREIEILQLVAKGLRYTTIASRLYLSN 562 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 GTV+ + + Y +L V+N+ +A Sbjct: 563 GTVRNYASTAYTKLGVRNKEEAVQKA 588 >UniRef50_D1XLE6 Two component transcriptional regulator, LuxR family n=3 Tax=Streptomyces RepID=D1XLE6_9ACTO Length = 231 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 84/214 (39%), Gaps = 16/214 (7%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + +++ D + + G+ L + A ++ + ++++D Sbjct: 15 ISVLVVDDEPVIRAGLSAILDSQADITVAGTADDGEQAVEACARLRPDVLLMDIRMPRRD 74 Query: 61 CYWLLQKTVVQF----PEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNS 116 W L + + +VL+ T ++ + + + ++S+ E AV + Sbjct: 75 GLWALAELGRRGLLGPGRSRVLMLTTFDLDAYVDDALTAGASGFLLKNSSYEQLTEAVRA 134 Query: 117 AAMGMMFLPGDWRTTP------------EKDIKDLKSLSARQREILTMLAAGESNKEIGR 164 AA G L ++++ L+ L+ R+ ++L ++ G SN EI Sbjct: 135 AAAGHSALSPAVTRRIIEGHLSGRPRPSDQELARLRDLTEREVDVLRLIRDGLSNAEIAG 194 Query: 165 ALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNI 198 L +S TVK H+ + + ++R QAA++ Sbjct: 195 ELVVSLHTVKTHVSRVLMKTGCQSRAQAAVLARN 228 >UniRef50_C4RI73 Two-component system response regulator n=6 Tax=Actinomycetales RepID=C4RI73_9ACTO Length = 217 Score = 234 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 89/207 (42%), Gaps = 9/207 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++IV+ D ++ G+++ L+ + A E ++ + +V+LD Sbjct: 2 VRIVVVDDDALVRSGLRLILRVAPDIEVVATA-SGAEAIDEITRHRPDVVLLDIRMPDVD 60 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +L++ V + T ++ + + +D+ E A V + A G Sbjct: 61 GLTVLRQVRAMPHPPTVAMLTTFDADEYITTALRIGAAGFILKDTHPEHLAQLVRALAAG 120 Query: 121 MMFLPGDWRTTP--------EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 + L T E + L+ R+REIL +A G SN EIG + +S GT Sbjct: 121 AVVLSPKVSRTVVDWRVENGEDAASAIARLTDREREILVHVADGLSNAEIGTRMYLSGGT 180 Query: 173 VKAHLESLYRRLEVKNRTQAAMMLNIS 199 VK H+ ++ +L+V +R QAA++ + Sbjct: 181 VKDHVSAILTKLKVTSRVQAALIAQRA 207 >UniRef50_C1XWT0 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=C1XWT0_9DEIN Length = 206 Score = 234 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 46/199 (23%), Positives = 89/199 (44%), Gaps = 5/199 (2%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 ++ + + + G+++++ + + A A+E ++L +V++D G Sbjct: 3 RVFIVEDHAFTRDGLRVAVGREPDLQVVGEARSAEEGIEQLAHTSADVVLMDIGLPGMDG 62 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 + +F V+V++ + + + A + + + LA+ +AA+G Sbjct: 63 IEATKLVKERF-GVRVVVLTVHQLEAEVLAAMTAGADAYCLKSTDPASLLLAIRAAAIGS 121 Query: 122 MFLPGDWRTTPEKDIKDL----KSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHL 177 +L + L LS R+ E+L ++A G SNKEI + L IS TVK H+ Sbjct: 122 TYLDPQIAHIVLGQLSVLSGGQAQLSPRELEVLRLIAEGLSNKEIAQRLGISLSTVKTHI 181 Query: 178 ESLYRRLEVKNRTQAAMML 196 E L +L +RTQAA+ Sbjct: 182 EELLAKLSASDRTQAAIKA 200 >UniRef50_Q1LE49 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderiaceae RepID=Q1LE49_RALME Length = 264 Score = 234 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 86/204 (42%), Gaps = 10/204 (4%) Query: 3 IVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCY 62 +++ + ++ G++ L ++ A E Q S L+++D G Sbjct: 7 VLIVEDHNLLRAGLRSMLSAQMGYHVAGEARDGREACQLAISLCPDLILMDLSLPGMNGI 66 Query: 63 WLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMM 122 + + P ++++ + N +++E + V V +D++ + A+ +G Sbjct: 67 DAIAAIKRRSPGIRIIALSVHQNDEYVREALRAGVDGYVLKDTSFDDLVTAMRVVLLGKK 126 Query: 123 FLPGDW----------RTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 L + L+AR+R +L ++A G SN+++G +N+S T Sbjct: 127 HLSPELYGNLVESYVSGHEMSTAKTGWDLLTARERSVLKLVAEGRSNRQVGIYMNLSPKT 186 Query: 173 VKAHLESLYRRLEVKNRTQAAMML 196 ++ + SL R+L + N T+ ++ Sbjct: 187 IEKYRASLMRKLGITNLTELVLIA 210 >UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67MG8_SYMTH Length = 197 Score = 234 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 71/189 (37%), Gaps = 11/189 (5%) Query: 19 SLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCYWLLQKTVVQFPEVKVL 78 LQ + A + +E + ++ +V++D + PE +V+ Sbjct: 1 MLQSEPDLELVGEAGRGEEAVELTKALKPDVVIMDISLPDMSGIEATRLIKEAVPETRVI 60 Query: 79 ITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGDWRTTPEK---- 134 + ++ E + A + + S A+ + G L + Sbjct: 61 GLTMHEEEPFVLEFLRAGADAYIVKRSAAADLVGAIRAVMEGQAVLDPAVTRAVVEGYVS 120 Query: 135 -------DIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVK 187 ++ L+ R+REIL ++A G +N EI R L IS TV+ H ++ +L + Sbjct: 121 RPGRAVGQPEEPCPLTPREREILVLIAEGLTNAEIARRLYISEKTVQTHRSNMLDKLGIH 180 Query: 188 NRTQAAMML 196 +RT+ Sbjct: 181 DRTELVRYA 189 >UniRef50_P44845 Nitrate/nitrite response regulator protein homolog n=109 Tax=Gammaproteobacteria RepID=NARP_HAEIN Length = 208 Score = 234 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 42/198 (21%), Positives = 83/198 (41%), Gaps = 3/198 (1%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D + G+K ++ + S E +++LD + G Sbjct: 5 LKVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGLS 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L+ + + ++LI K + +I + +D+ +T + A G Sbjct: 65 GLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRIAQG 124 Query: 121 MMFLPGDWRTTPEK---DIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHL 177 + L + + + L SL+ R+ +L +A G SNK+I L IS TVK H+ Sbjct: 125 EVILSDSIKNLLLERTHEDNPLDSLTDREMGVLRQIATGLSNKQIAAQLFISEETVKVHI 184 Query: 178 ESLYRRLEVKNRTQAAMM 195 +L R+L V +R A ++ Sbjct: 185 RNLLRKLNVHSRVAATVL 202 >UniRef50_D1C3I4 Two component transcriptional regulator, LuxR family n=2 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C3I4_SPHTD Length = 249 Score = 234 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 91/215 (42%), Gaps = 21/215 (9%) Query: 3 IVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCY 62 +++ D +F G++ +++ + A+ E ++ + + ++ ++D G Sbjct: 13 VLIVDDHPLFRQGLRRLIEEGGAFKVVAEATSGHEAIREADIHRPSIALIDIQLPGVTGL 72 Query: 63 WLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMM 122 + + Q P + ++I + + L E + A + +D + +++ G Sbjct: 73 NVARILKKQHPSMHIIILSMHVDDERLFEAVRAGASAFLTKDIEAQELISSLDRVVQGEQ 132 Query: 123 FLPGDWRTTPEKDIKDLK---------------------SLSARQREILTMLAAGESNKE 161 + + + PE + L LS R+ E+L +A G SNKE Sbjct: 133 LINLEVMSRPELAWRVLSEFRQLTGDDGEAGPASDPKRLPLSVREVEVLDCVAQGLSNKE 192 Query: 162 IGRALNISTGTVKAHLESLYRRLEVKNRTQAAMML 196 I AL I+ TVK H+ S+ R+L+V +R QA + Sbjct: 193 IAEALFITEQTVKNHMTSVLRKLQVNDRVQAVLCA 227 >UniRef50_Q73CG3 DNA-binding response regulator, LuxR family n=10 Tax=Firmicutes RepID=Q73CG3_BACC1 Length = 214 Score = 234 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 83/202 (41%), Gaps = 8/202 (3%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 +++ D + G+K+ ++ I A+ +E +E ++++D + Sbjct: 4 NVLIVDDHFVVREGLKLIIETSDSFQIIGEATNGEEALSFIEKKKPDVILMDLNMPKMSG 63 Query: 62 YWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGM 121 ++ + ++I T + + I + +D+ E + +A G Sbjct: 64 LETIEVLNKKQNHTPIIILTTYNEDELMLKGIELGAKGYLLKDTDRENLFRTLEAAIRGE 123 Query: 122 MFLPGDWRTTPEKDIK--------DLKSLSARQREILTMLAAGESNKEIGRALNISTGTV 173 + L + + + +L+ ++ +L +A G NK+I + I+ TV Sbjct: 124 ILLQPNIMEKIVNYKRKEIHANVVEENNLTEKELFVLKAIARGNKNKDIAFDMGIAERTV 183 Query: 174 KAHLESLYRRLEVKNRTQAAMM 195 KA+L ++Y +L V +R++A + Sbjct: 184 KAYLTNIYNKLGVNSRSEAVAV 205 >UniRef50_C4KQQ0 Transcriptional regulatory protein DegU (Protease production enhancerprotein) n=83 Tax=Betaproteobacteria RepID=C4KQQ0_BURPS Length = 233 Score = 234 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 45/221 (20%), Positives = 91/221 (41%), Gaps = 22/221 (9%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D ++F G+K+ LQ++ + AS E ++ + + +++LD + G Sbjct: 3 IRVLLIDDHTLFRSGVKLLLQRQPDFEVVDEASDGVEGVKRAKQHQPDVILLDLNMPGLS 62 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 LQ V P V+I + L + + ++ ET + AA G Sbjct: 63 GLETLQLLVQDVPSAHVVILTVSEDAEELTTALRDGACGFLVKNIDAETLVAGIRKAAAG 122 Query: 121 MMFLPGDWRTTPEKDIK----------------------DLKSLSARQREILTMLAAGES 158 + ++ D L+ R+ +I+ LA G S Sbjct: 123 EPVIAESMTAKWIASLRAPVPAARPAPAAALAPAAHASVDPDQLTPREHDIVRALARGAS 182 Query: 159 NKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNIS 199 NKEI R +++ TVK H++++ ++L + +R Q A+ Sbjct: 183 NKEIAREFDVAESTVKIHVQNVLKKLNLSSRVQIAVYAVER 223 >UniRef50_C6XAG0 Two component transcriptional regulator, LuxR family n=2 Tax=Proteobacteria RepID=C6XAG0_METSD Length = 232 Score = 234 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 84/206 (40%), Gaps = 9/206 (4%) Query: 2 QIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFC 61 ++ + D ++F G+ ++ + A+ E +V++D + G Sbjct: 25 KVFLIDDHALFRKGVGQMIEADPAFRVVGEAASGSEGLLLAPPLQPDVVLIDLNMKGLNG 84 Query: 62 YWLLQKTVVQFP-EVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L++ + + + ++ + L E + + +D E ++ G Sbjct: 85 IETLRRFKTESSLQARFVVLTVSDAEDDLLEALRAGADGYLLKDMEPEDLCASLKKVISG 144 Query: 121 MMFLPGDWRTTPEKD--------IKDLKSLSARQREILTMLAAGESNKEIGRALNISTGT 172 M + ++ D +L+ R++EIL LA G +NK I R L IS T Sbjct: 145 MTVIQDSLTEVLKQALLEPRTRKADDDVALTDREQEILQCLADGLNNKTIARKLGISDTT 204 Query: 173 VKAHLESLYRRLEVKNRTQAAMMLNI 198 VK H++ L +L++ +R +AA+ + Sbjct: 205 VKVHIKHLLSKLKLTSRLEAAVWAHR 230 >UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUT0_9FIRM Length = 216 Score = 234 bits (598), Expect = 1e-60, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 80/200 (40%), Gaps = 4/200 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D + G+ + L + AS +E +K P + +LD Sbjct: 8 LRILLADDHRVLRKGLSLLLSSEEDFSVVAEASDGEEALEKAAKTPVDIALLDLSMPHMG 67 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L++ P V+VLI ++++ E + + +D+ A+ + A G Sbjct: 68 GLECLRRLKAMQPAVRVLILTMHSERQYVCECLRAGANGYLCKDTLDAELFRALRTVAAG 127 Query: 121 MMFLPGDWRTTP----EKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAH 176 +L ++ ++ +LS R+RE+L ++ G S I L +S TV + Sbjct: 128 GRYLGEREAELLIDGALEEPEEPAALSTREREVLELIVHGYSLSTIADKLYLSIKTVSTY 187 Query: 177 LESLYRRLEVKNRTQAAMML 196 L ++L+ ++ Sbjct: 188 KTRLLQKLDCTQNSELVDYA 207 >UniRef50_C2AL02 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AL02_TSUPA Length = 213 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 79/209 (37%), Gaps = 13/209 (6%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++++ D Q + +++ + A + + LV++D G Sbjct: 2 IRVLIVDDQRLIRDSLRMLFDGVDDFEVVGEARDGQQAGDEFARTLPDLVLMDLRMPGAD 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +++ Q P+ V++ T + L + + +D E AV G Sbjct: 62 GIVGIERIKAQDPDAAVVVLTTFDDDDHLYPALRAGAAGFLAKDIAPEDLLDAVRRTLAG 121 Query: 121 MMFLPGDWRTTPEKDI-------------KDLKSLSARQREILTMLAAGESNKEIGRALN 167 + L SL+AR+RE+L ++ G SN EI L+ Sbjct: 122 DVPLSPATVKRLIGQALVARTDAPAPAAAPAEYSLTAREREVLALIGQGLSNAEIAAELH 181 Query: 168 ISTGTVKAHLESLYRRLEVKNRTQAAMML 196 ++ TVK+H+ +L + + R Q A++ Sbjct: 182 LAVTTVKSHVTNLLAKTDSSTRLQLALLA 210 >UniRef50_B1M5J4 Two component transcriptional regulator, LuxR family n=7 Tax=Bacteria RepID=B1M5J4_METRJ Length = 222 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 81/206 (39%), Gaps = 10/206 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 +++ + D I + G++ L + A+ E + + + ++D G Sbjct: 5 IRVALADDHPIVLAGIRTLLNADPEIELVGEATSGSEALPMIHAADPDVAVVDVSMPGLN 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 L ++ P +VL+ + ++Q ++ + + S E AV + A G Sbjct: 65 GLELTERVAGSCPRTRVLVLTVHEDAAYVQPLLKAGARGYLLKRSAAEDLLRAVRAVAAG 124 Query: 121 MMFLPGDWRTTPEKDI----------KDLKSLSARQREILTMLAAGESNKEIGRALNIST 170 ++L + ++LS R+ ++L ++A G SNKEI R ++S Sbjct: 125 GIYLDPSVASHAMAHPATPTQGGDTEPSAEALSPRETDVLRLIAQGFSNKEIARRFDLSV 184 Query: 171 GTVKAHLESLYRRLEVKNRTQAAMML 196 +++ + +L ++ R + Sbjct: 185 KSIETYKARAAEKLGLRTRAEIIRYA 210 >UniRef50_D2PS71 Two component transcriptional regulator, LuxR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PS71_9ACTO Length = 220 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 82/208 (39%), Gaps = 9/208 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + +V+ + QS + + + + DE + +V++D G Sbjct: 5 IGVVVAEDQSSVRAALAELVGSDPALDLLGCGATGDEAIELATRLHPDVVLMDIRMPGTD 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 + + P KVL+ T ++ E + + + + V A+++ G Sbjct: 65 GLTATRVVCARLPATKVLVLTTFDLDEYVYEALGAGATGFLLKSAPVTDILRAIHTVHEG 124 Query: 121 MMFLPGDWRTTPEKDIKD---------LKSLSARQREILTMLAAGESNKEIGRALNISTG 171 L + ++ + LS R+ E++ + G SN+E+ L +S Sbjct: 125 QAMLSPEITRRLIAEVSRGRTRRTPEAFEQLSPRELELVGAVLRGLSNEELAAELFLSLS 184 Query: 172 TVKAHLESLYRRLEVKNRTQAAMMLNIS 199 TVK +L ++ +L+V++RTQ ++ S Sbjct: 185 TVKTYLSRIFSKLDVRDRTQLVILAYES 212 >UniRef50_Q15T22 Two component transcriptional regulator, LuxR family n=4 Tax=Alteromonadales RepID=Q15T22_PSEA6 Length = 214 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 78/202 (38%), Gaps = 6/202 (2%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 ++I++ D + G++ L+ V + A+ +E + LV++D G Sbjct: 2 IKILLVDDHELVRTGIRRILEDVQGFVVVGEATTGEEAVKFCRKNAPDLVLMDMSMPGIG 61 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 ++ + +V++ + +V+ + +DS + LA+ A G Sbjct: 62 GLEATKQILRFSENTRVIVLSVHKENPIPAKVMRMGAFGYLTKDSDPKEMELAIRKVAAG 121 Query: 121 MMFLPGDWRTTPE------KDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVK 174 ++ D D +SLS R+ EI ML G +I + LNIS TV Sbjct: 122 QKYVSPDIAQQIAIGALDFSDGNPFESLSERELEITLMLTKGSKVPDIAKFLNISAKTVN 181 Query: 175 AHLESLYRRLEVKNRTQAAMML 196 H ++ +L V + + Sbjct: 182 THRYRMFEKLNVSTDVELTHLA 203 >UniRef50_Q2W0D2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=4 Tax=Rhodospirillaceae RepID=Q2W0D2_MAGSA Length = 290 Score = 233 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 11/208 (5%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPE-ALVMLDGDQDGE 59 M+I++ D +F G++ L Q +I A + ++S + +V+LD G Sbjct: 72 MKILIADDHELFRDGLRHVLDQFEGPPTIIEACDFPQAIAAVQSEKDIDIVLLDLTMPGM 131 Query: 60 FCYWLLQKTVVQFPEV-KVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAA 118 L K P +++ + ++R + + ++ +P+ S+ A+ Sbjct: 132 AWTEGLAKLKELLPSTVPLIVLSASDDRRHVLQAVNMGAAGFIPKTSSSRVMLSALKLVL 191 Query: 119 MGMMFLPGDWRTTPE---------KDIKDLKSLSARQREILTMLAAGESNKEIGRALNIS 169 G ++LP + SL+ RQRE+L +L G+SNKEI R L ++ Sbjct: 192 SGGVYLPPALLEQGGPGGDDGAPVAGESAIASLTPRQREVLALLGQGKSNKEIARVLELA 251 Query: 170 TGTVKAHLESLYRRLEVKNRTQAAMMLN 197 GTVK H+ ++ + L V NRT+A + + Sbjct: 252 EGTVKLHVTAILKALNVNNRTRAVVAAS 279 >UniRef50_C6C0G1 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0G1_DESAD Length = 218 Score = 233 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 81/201 (40%), Gaps = 10/201 (4%) Query: 1 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF 60 + +V+ D ++ G+K L+ + + A +E + + ++D + Sbjct: 5 VTVVIADDHALVREGLKTILKSQSGISVLGMAENGEEAVRLCRRLNPDVALMDLSMPIKS 64 Query: 61 CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG 120 +Q+ + + K L + + V + S+ + +A+ + G Sbjct: 65 GVQAIQELSGEG-KTKFLALTAHVEPDHIYSALDAGASGYVLKTSSSKELVMAIETVMQG 123 Query: 121 MMFLPGDWRTTPEKDI---------KDLKSLSARQREILTMLAAGESNKEIGRALNISTG 171 ++L D K L+SL+ R+RE+L + AG N+EI L IS Sbjct: 124 KVYLAPDISAEVAKGFLQRDRSNSCDSLESLTEREREVLKQVLAGYKNREIADLLVISVK 183 Query: 172 TVKAHLESLYRRLEVKNRTQA 192 TV+ H + ++L ++++ + Sbjct: 184 TVEKHRSNFMKKLGLRSKAEL 204 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.216 0.769 Lambda K H 0.267 0.0663 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,992,515,928 Number of Sequences: 3077464 Number of extensions: 133675154 Number of successful extensions: 462232 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 34840 Number of HSP's successfully gapped in prelim test: 10501 Number of HSP's that attempted gapping in prelim test: 373469 Number of HSP's gapped (non-prelim): 52472 length of query: 200 length of database: 1,040,396,356 effective HSP length: 122 effective length of query: 78 effective length of database: 664,945,748 effective search space: 51865768344 effective search space used: 51865768344 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.8 bits) S2: 91 (39.0 bits)