33 c1cygA_ Probab=100.00  E-value=0  Score=521.29  Aligned_columns=434  Identities=18%

Q ss_pred             CCCCCCHHHCEEEEEECCCCCCCCCCCCCCCC--------------CCHHHHHHHHHHH--HHHHCCCCEEEECCCCCCC
Q ss_conf             77778834365799704623345788864335--------------4587632032125--7996799899982553578
Q batch____       142 APPRTPWGSTIIYEAHVKGLTYLHPEIPVEIR--------------GTYKALGHPVMIN--YLKQLGITALELLPVAQFA  205 (657)
Q Consensus       142 ~~~~~~~~~~viYE~hv~~ft~~~~~~~~~~~--------------Gtf~g~~~~~kLd--yLk~LGv~~I~L~Pi~~~~  205 (657)
                      +...+.|++.||||++++.|...++.......              |+|+|+  ++|||  |||+||||+||||||+|+.
T Consensus         3 ~~~~~~w~~~~iY~i~~drF~~g~~~~~~~~~~~~~~~~~~~~~~gGd~~gi--~~kLd~pYl~~LGv~~i~l~P~~~~~   80 (680)
T c1cygA_           3 NLNKVNFTSDVVYQIVVDRFVDGNTSNNPSGALFSSGCTNLRKYCGGDWQGI--INKINDGYLTDMGVTAIWISQPVENV   80 (680)
T ss_dssp             CCCTTCCTTCCEEEECGGGTCCSCGGGCCCGGGBCGGGCSTTSBCCCCHHHH--HHHHHTSTTTTTTCCEEEECCCEEEC
T ss_pred             CCCHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH--HHHHCHHHHHHCCCCEEEECCCCCCC
T ss_conf             7881564157469993200137888888766556667655444157859999--97628877997299899987751466


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHCCCCCCCC
Q ss_conf             87654455666777775675456151116886551889999999999989989998730334687655200001467773
Q batch____       206 SEPRLQRMGLSNYWGYNPVAMFALHPAYACSPETALDEFRDAIKALHKAGIEVILDIVLNHSAELDLDGPLFSLRGIDNR  285 (657)
Q Consensus       206 ~~~~~~~~~~~~~wGY~~~~y~avd~~yGt~~~~~~~dfk~LV~~aH~~GI~VIlDvV~NH~~~~~~~~~~~~~~~~~~~  285 (657)
                      ........+...||||++.||++|||+|||     ++|||+||++||++||+||||+|+||++..+.+.+.....+....
T Consensus        81 ~~~~~~~~~~~~~~GY~~~d~~~id~~~Gt-----~~dfk~lV~~aH~~Gi~VilD~V~NH~s~~~~~~~~~~~~~~~~~  155 (680)
T c1cygA_          81 FSVMNDASGSASYHGYWARDFKKPNPFFGT-----LSDFQRLVDAAHAKGIKVIIDFAPNHTSPASETNPSYMENGRLYD  155 (680)
T ss_dssp             CCCCSSSSCCCSTTSCSEEEEEEECTTTCC-----HHHHHHHHHHHHHTTCEEEEEECTTEEEECCSSCTTSTTTTCEEE
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-----HHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf             655556667677777565624335633289-----999999999999889889999962336887754320001573454


Q ss_pred             CCEEECCCCCCCCC--------------------CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHCCCCC
Q ss_conf             31466589982758--------------------5645515588999999999999999986397899986632067421
Q batch____       286 SYYWIREDGDYHNW--------------------TGCGNTLNLSHPAVVDYASACLRYWVETCHVDGFRFDLAAVMGRTP  345 (657)
Q Consensus       286 ~~~~~~~~g~~~~~--------------------~g~~~dln~~np~Vr~~i~~~~~~Wl~e~gvDGfR~D~a~~i~~~~  345 (657)
                      .++...+.....++                    ....+|||++||+||++|++++++|+ ++||||||||++++++.++
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~v~~~~~~~~~~w~-~~giDGfR~D~~~~~~~~~  234 (680)
T c1cygA_         156 NGTLLGGYTNDANMYFHHNGGTTFSSLEDGIYRNLFDLADLNHQNPVIDRYLKDAVKMWI-DMGIDGIRMDAVKHMPFGW  234 (680)
T ss_dssp             TTEEEECSTTCTTCCBCCSCBCCCSSHHHHHSSBSTTEEEBCTTSHHHHHHHHHHHHHHH-TTTCCEEEESCGGGSCSHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHH-HCCCCEEEECCCCCCCHHH
T ss_conf             653046788765665336688755665631005778888546899999999999999998-4458837761410389989


Q ss_pred             CCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCC---CCCCCCCCEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf             222107999998836566876999701477630001---36787741344379999999986268754889998777538
Q batch____       346 EFRQDAPLFTAIQNCPVLSQVKLIAEPWDIAPGGYQ---VGNFPPLFAEWNDHFRDAARRFWLHYDLPLGAFAGRFAASS  422 (657)
Q Consensus       346 ~~~~~~~l~~~i~~~~~~~~~~li~E~~~~~~~~~~---~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  422 (657)
                      +.++...+...       ...++++|.|........   ........+.+++.+.+.++.++.........+...+....
T Consensus       235 ~~~~~~~~~~~-------~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (680)
T c1cygA_         235 QKSLMDEIDNY-------RPVFTFGEWFLSENEVDANNHYFANESGMSLLDFRFGQKLRQVLRNNSDNWYGFNQMIQDTA  307 (680)
T ss_dssp             HHHHHHHHHHH-------CCCEEEECCCCCTTCCCHHHHHHHHHSSCEEBCHHHHHHHHHHHTTCSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH-------CCEEEEEEEECCCCCCCCHHHHHCCCCCCEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf             99999998621-------88089998644775322013330367771454207999999986048778999999998876


Q ss_pred             HHHHCCCCCHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             76402466732313322125776246654211000133220135653201232078655566432035789999999999
Q batch____       423 DVFKRNGRLPSAAINLVTAHDGFTLRDCVCFNHKHNEANGEENRDGTNNNYSNNHGKEGLGGSLDLVERRRDSIHALLTT  502 (657)
Q Consensus       423 ~~~~~~~~~~~~~~nfi~~HD~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~a~~~  502 (657)
                      ..+..    +...++|++|||                                       ..+........+++++++++
T Consensus       308 ~~~~~----~~~~v~f~~nHD---------------------------------------~~R~~~~~~~~~~~~~a~~~  344 (680)
T c1cygA_         308 SAYDE----VLDQVTFIDNHD---------------------------------------MDRFMIDGGDPRKVDMALAV  344 (680)
T ss_dssp             HHCTT----GGGCEECSCCTT---------------------------------------SCCSCCTTCCTHHHHHHHHH
T ss_pred             HHCCC----CCCEEEECCCCC---------------------------------------CCHHHHHCCCHHHHHHHHHH
T ss_conf             41886----243289605787---------------------------------------55032317999999999999


Q ss_pred             HHHHCCCEEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCEEEEEC
Q ss_conf             99818971898212306567888887889986476687821037999999999998758542155301134475799807
Q batch____       503 LLLSQGTPMLLAGDEHGHSQHGNNNAYCQDNQLTWLDWSQASSGLTAFTAALIHLRKRIPALVENRWWEEGDGNVRWLNR  582 (657)
Q Consensus       503 ~~t~pG~P~iy~G~E~g~~~~~~~~~~~~~~~~~~~~W~~~~~~l~~~~r~Li~lRk~~pal~~g~~~~~~~~~i~~~~~  582 (657)
                      +|++||+||||||+|+|++..++      +..+..|.|...+.++++++|+|++|||++|+|+.|.              
T Consensus       345 ~l~~pG~P~iyyG~E~g~~~~~~------~~~r~~~~~~~~~~~~~~~~~~L~~lR~~~~al~~G~--------------  404 (680)
T c1cygA_         345 LLTSRGVPNIYYGTEQYMTGNGD------PNNRKMMSSFNKNTRAYQVIQKLSSLRRNNPALAYGD--------------  404 (680)
T ss_dssp             HHHSSSEEEEETTGGGTCCCCST------TGGGCCCCCCCSCSHHHHHHHHHHHHHHHCHHHHHCE--------------
T ss_pred             HHHHCCCEEEECCEECCCCCCCC------CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHCCE--------------
T ss_conf             99908971999563524368768------6543215889888589999999999987683221571--------------


Q ss_pred             CCCCEEEEECCCCCCEEEEECCCEEEEEEECCCCCEEEE------ECCCCEEEEEECCCCCCCCC------CCEEECCCC
Q ss_conf             787202420256542366505975999996789858898------08985289860688887654------227863876
Q batch____       583 YAQPLSTDEWQNGPKQLQILLSDRFLIAINATLEVTEIV------LPAGEWHAIPPFAGEDNPVI------TAVWQGPAH  650 (657)
Q Consensus       583 ~~~~~~~~~~~~~~~~~~~~~~~~~lV~~N~s~~~~~v~------Lp~g~w~~l~d~~~~~~~~~------~~~~~~Pa~  650 (657)
                         .......++...+.|...++.++|++|++.......      +|.+.|............+.      ..+..+++.
T Consensus       405 ---~~~~~~~~~v~af~R~~~~~~~~v~~N~~~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~~~t~~~~~~~~t~~~~~~  481 (680)
T c1cygA_         405 ---TEQRWINGDVYVYERQFGKDVVLVAVNRSSSSNYSITGLFTALPAGTYTDQLGGLLDGNTIQVGSNGSVNAFDLGPG  481 (680)
T ss_dssp             ---EEEEEECSSEEEEEEEETTEEEEEEEECCSSCCEEECSCBCSSCSEEECCTTTTTTCCCCEEECGGGBBCCEEECTT
T ss_pred             ---EEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCC
T ss_conf             ---78995079489999962994299840455555431122222322122221001345552023204564035640677


Q ss_pred             EEEEEE
Q ss_conf             589995
Q batch____       651 GLCVFQ  656 (657)
Q Consensus       651 ~~~Vl~  656 (657)
                      ++.+..
T Consensus       482 ~~~~~~  487 (680)
T c1cygA_         482 EVGVWA  487 (680)
T ss_dssp             CEEEEE
T ss_pred             CCEEEE
T ss_conf             520000