305 d1pkla2 Probab=91.56   E-value=0.94  Score=23.59  Aligned_columns=194  Identities=13%

Q ss_pred             CCCHHHHHHHHHHCCCCEEEEEECHHHHCCCCCHHHHHHHHHHHCCCCEEEECCCCCH--------HHHHHHHHCCCCEE
Q ss_conf             7898999999997899899996163663287110899999997389959995531699--------99999871145526
Q batch____        28 GNDPLPRLQDYAAQGAEVLHLVDLTGAKDPAKRQIPLIKTLVAGVNVPVQVGGGVRSE--------EDVAALLEAGVARV   99 (245)
Q Consensus        28 ~~dp~~~A~~~~~~Gad~l~V~dl~~~~~g~~~~~~~i~~i~~~~~ipi~~~ggi~~~--------e~~~~~~~~ga~~v   99 (245)
                      +.+-.+..+.+.++|++..-+---.+.......-...++++.+....|+-+-.....+        ++++.+++.|+|.+
T Consensus        30 as~~~e~i~~Li~aG~dv~RiN~sHg~~e~~~~~i~~iR~~~~~~g~~v~Il~Dl~Gp~~lt~kD~~di~~a~~~gvD~I  109 (258)
T d1pkla2          30 STQSVEALKGLIQSGMSVARMNFSHGSHEYHQTTINNVRQAAAELGVNIAIALDTKGPPAVSAKDRVDLQFGVEQGVDMI  109 (258)
T ss_dssp             GGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHTTCCCEEEEECCCCCCSCHHHHHHHHHHHHHTCSEE
T ss_pred             CCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEE
T ss_conf             76898999999975998999988768988999999999999997289808984155554487556999999984798699


Q ss_pred             EEEHHHCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCC
Q ss_conf             64033138089999999861986337752001314567189851786646889999999986089868998254652110
Q batch____       100 VVGSTAVKSQDMVKGWFERFGADALVLALDVRIDEQGNKQVAVSGWQENSGVSLEQLVETYLPVGLKHVLCTDISRDGTL  179 (245)
Q Consensus       100 ~i~~~~~~~~~~~~~~~~~~G~~~iv~~~d~~~~~~~~~~v~~~~~~~~~~i~~~~~~~~~~~~g~~~ii~~~i~~~g~~  179 (245)
                      .+  .-..+++-+.++.+.+....--..+-++.++.....            +..+++..     .+++++.   |.-..
T Consensus       110 ~l--SfV~sa~di~~ir~~l~~~g~~~~IiakIEt~~ai~------------nl~eI~~~-----~Dgi~ia---rgDLg  167 (258)
T d1pkla2         110 FA--SFIRSAEQVGDVRKALGPKGRDIMIICKIENHQGVQ------------NIDSIIEE-----SDGIMVA---RGDLG  167 (258)
T ss_dssp             EE--TTCCSHHHHHHHHHHHCGGGTTSEEEEEECSHHHHH------------THHHHHHH-----SSEEEEC---HHHHT
T ss_pred             EE--CCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHH------------HHHHHHHH-----CCEEEEC---CCHHH
T ss_conf             98--885798999999999986599846999866977984------------08999986-----3989990---62342


Q ss_pred             CCCCHHHHHHHHHHCC------CCEEEE---------ECCCCCHHHHHHHHHC---CCCEEEEEHHHHCCCCCHHHHHHH
Q ss_conf             4749999999998579------952999---------5699999999999976---998999973787699889999998
Q batch____       180 AGSNVSLYEEVCARYP------QVAFQS---------SGGIGDIDDVAALRGT---GVRGVIVGRALLEGKFTVKEAIAC  241 (245)
Q Consensus       180 ~g~d~~~~~~l~~~~~------~ipii~---------~GGi~~~~di~~l~~~---G~d~vlvGsAl~~g~~~~~ea~~~  241 (245)
                      ....++.+..+.+++-      ..|||.         ...+-+..++.-+.++   |+|+++...---.|+ -|.|+.++
T Consensus       168 ~e~~~~~v~~~Qk~ii~~c~~~gkPvi~aTq~leSM~~~~~PTRAEv~Dv~nav~dG~d~imLs~ETa~G~-~p~~~V~~  246 (258)
T d1pkla2         168 VEIPAEKVVVAQKILISKCNVAGKPVICATQMLESMTYNPRPTRAEVSDVANAVFNGADCVMLSGETAKGK-YPNEVVQY  246 (258)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHHTCCEEECSSSSGGGGTSSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCS-CHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCC-CHHHHHHH
T ss_conf             10773788999999999999659979991640466640879898899999989972748899707633888-99999999


Q ss_pred             HHC
Q ss_conf             634
Q batch____       242 WQN  244 (245)
Q Consensus       242 ~~~  244 (245)
                      +.+
T Consensus       247 ~~~  249 (258)
T d1pkla2         247 MAR  249 (258)
T ss_dssp             HHH
T ss_pred             HHH
T ss_conf             999