124 d1juba_ Probab=98.71   E-value=1.4e-06  Score=56.61  Aligned_columns=163  Identities=14%

Q ss_pred             HHHCCCCEEEECCCCCHHH----HHHHHHCC-CCEEEEEHH---------HCCCHHHHHHHHHHCCCCCEEEEEEEEECC
Q ss_conf             9738995999553169999----99987114-552664033---------138089999999861986337752001314
Q batch____        69 VAGVNVPVQVGGGVRSEED----VAALLEAG-VARVVVGST---------AVKSQDMVKGWFERFGADALVLALDVRIDE  134 (245)
Q Consensus        69 ~~~~~ipi~~~ggi~~~e~----~~~~~~~g-a~~v~i~~~---------~~~~~~~~~~~~~~~G~~~iv~~~d~~~~~  134 (245)
                      ....+.|+.+.-.-.++++    ++.+.+.+ ++.+-++..         ...+++.+.++++..-...           
T Consensus        89 ~~~~~~pi~~~i~~~~~~~~~~~~~~~~~~~~a~~i~in~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~-----------  157 (311)
T d1juba_          89 ENAQEGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFF-----------  157 (311)
T ss_dssp             HTCSSSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTC-----------
T ss_pred             HHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHC-----------
T ss_conf             627894699971689989999999876523589877337866554320032049899999999999722-----------


Q ss_pred             CCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCC------------------------HHHHHHH
Q ss_conf             5671898517866468899999999860898689982546521104749------------------------9999999
Q batch____       135 QGNKQVAVSGWQENSGVSLEQLVETYLPVGLKHVLCTDISRDGTLAGSN------------------------VSLYEEV  190 (245)
Q Consensus       135 ~~~~~v~~~~~~~~~~i~~~~~~~~~~~~g~~~ii~~~i~~~g~~~g~d------------------------~~~~~~l  190 (245)
                        ..-+..+--.........+.+..+.+.|++.+.+.+....+......                        ++.+..+
T Consensus       158 --~~pv~~k~~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~a~~~~~~~  235 (311)
T d1juba_         158 --TKPLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAF  235 (311)
T ss_dssp             --CSCEEEEECCCCSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHH
T ss_pred             --CCCEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEECCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf             --894110104777640029999888737986999708865321022321000013344456646411046899999998


Q ss_pred             HHHC-CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEHHH-HCCCCCHHHHHHHHHC
Q ss_conf             9857-9952999569999999999997699899997378-7699889999998634
Q batch____       191 CARY-PQVAFQSSGGIGDIDDVAALRGTGVRGVIVGRAL-LEGKFTVKEAIACWQN  244 (245)
Q Consensus       191 ~~~~-~~ipii~~GGi~~~~di~~l~~~G~d~vlvGsAl-~~g~~~~~ea~~~~~~  244 (245)
                      .+.. +++|||++|||++.+|+.++..+|||+|.+||++ +.|.--+++.++.|+.
T Consensus       236 ~~~~~~~ipii~~GGI~~~~dv~k~l~lGAdaV~igta~~~~g~~~~~~i~~eL~~  291 (311)
T d1juba_         236 YTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGTALHKEGPAIFDRIIKELEE  291 (311)
T ss_dssp             HTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHCTHHHHHHHHHHHH
T ss_pred             HHHCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHHCCHHHHHHHHHHHHH
T ss_conf             88507896699947879999999999729989999278885258999999999999