47 c1ltxR_ Probab=99.65   E-value=6.9e-14  Score=109.98  Aligned_columns=298  Identities=19%

Q ss_pred             CEEEEEEECCCHHHHHHHHHHH-CCCCEEEEECCCCCCCCCCCCCCEEEE------------------------------
Q ss_conf             6568999989589999999995-698499997786546557654401678------------------------------
Q batch____         2 EHFDVAIIGLGPAGSALARKLA-GKMQVIALDKKHQCGTEGFSKPCGGLL------------------------------   50 (354)
Q Consensus         2 ~~~DV~IvGaG~aGl~~A~~L~-~g~~V~viEk~~~~~~~~~~~~~g~~l------------------------------   50 (354)
                      ++|||+|||||+|||++|+.|+ +|++|+|+|+++.++.........+..                              
T Consensus         6 ~~~DVvVIGaG~aGL~aA~~La~~G~~V~vlEa~~~~GG~~~s~~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (494)
T c1ltxR_           6 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENTENSMWQEQILENEEAIPLSS   85 (494)
T ss_dssp             SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHHTTTCCCCCCCGGGGSCTTEEEEEBCS
T ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             43788999898889999999998798099996788997127998527704321463225654212222234420011332


Q ss_pred             --------------------------------------------------------------------------------
Q ss_conf             --------------------------------------------------------------------------------
Q batch____        51 --------------------------------------------------------------------------------   50 (354)
Q Consensus        51 --------------------------------------------------------------------------------   50 (354)
                                                                                                      
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (494)
T c1ltxR_          86 KDKTIQHVEVFCYASQDKNRITYSQIIKEGRRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQV  165 (494)
T ss_dssp             SCCCEEEEEEEECSTTCCCCCCHHHHHHTGGGCCEESSCCCEETTSHHHHHHHHHTGGGGCCEEEEEEEEEEETTEEEEC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHC
T ss_conf             23333323311114655543122232110100233312134440148889764428565565564442102001402114


Q ss_pred             ------------------------------------------CHHHHHHHHHCCCCHHHHHHCCCCEEEEEECCCC----
Q ss_conf             ------------------------------------------7889999998799515776116512457721476----
Q batch____        51 ------------------------------------------APDAQRSFIRDGLTLPVDVIANPQIFSVKTVDVA----   84 (354)
Q Consensus        51 ------------------------------------------~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~----   84 (354)
                                                                .....+++++.+......................    
T Consensus       166 p~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (494)
T c1ltxR_         166 PCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEEHPDEYRAYEGTTFSEYLKTQKLTPNLQYFVLHSIAMTSTSCTVDGLK  245 (494)
T ss_dssp             CCSHHHHHHCSSSCHHHHHHHHHHHHHHTTGGGCGGGTGGGTTSBHHHHHHHSSCCHHHHHHHHTTTSCCCCCBHHHHHH
T ss_pred             CCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf             58967872165643034443456777752356675886432159688999883899999999999997514788247999


Q ss_pred             -----CCCCCCCCCCEEEEEHH---HHHHHHHHHHCC-CCEEEECCEEEEEEECCCEEEEEEEECCCEEEEEEEEEEECC
Q ss_conf             -----52223478866997599---999999997307-988998999998431574257999964980899863465045
Q batch____        85 -----ASLTRNYQRSYININRH---AFDLWMKSLIPA-SVEVYHDSLCRKIWREDDKWHVIFRADGWEQHITARYLVGAD  155 (354)
Q Consensus        85 -----~~~~~~~~~~~~~~~r~---~l~~~L~~~~~~-g~~v~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~a~~vv~Ad  155 (354)
                           ......+....+...+.   .+-+.|.+.+++ |++++.+++|..+..+.+...+......++++++|+.||.+.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~Gg~i~l~~~V~~I~~~~~~~~~~~v~~~~g~~~~a~~VI~a~  325 (494)
T c1ltxR_         246 ATKKFLQCLGRYGNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIED  325 (494)
T ss_dssp             HHHHHHTTTTSSSSSSEEEETTCTTHHHHHHHHHHHHTTCEEETTCCEEEEEEETTTCCEEEEEETTCCEEECSEEEEEG
T ss_pred             HHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCEEEEECCEEEEEECCCCCEEEEEEECCCCEEEECEEEECC
T ss_conf             99999999653066855886488789999999997404870883042269998388976999993798399907899868


Q ss_pred             CCCCHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCEEE-----ECCCCCEEEEEE-------CCCCEEEEEEEECCCCC
Q ss_conf             776133676076567660368999980357765553488-----625697899998-------48996999999407642
Q batch____       156 GANSMVRRHLYPDHQIRKYVAIQQWFAEKHPVPFYSCIF-----DNSITNCYSWSI-------SKDGYFIFGGAYPMKDG  223 (354)
Q Consensus       156 G~~s~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~  223 (354)
                      .......................................     .......+.+..       |.+..............
T Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ap~g~~~l~~~~~~~~~~  405 (494)
T c1ltxR_         326 SYLSENTCSRVQYRQISRAVLITDGSVLKTDADQQVSILTVPAEEPGSFAVRVIELCSSTMTCMKGTYLVHLTCMSSKTA  405 (494)
T ss_dssp             GGBCTTTTSSCCCEEEEEEEEEESSCSSCCSSCCCEEEEEECCCSSSCCCEEEEEECGGGSSSCTTCEEEEEEEECSSCH
T ss_pred             CCCCHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCC
T ss_conf             40363643135555304799997023456777652699963635587771899981388674887857999998179980


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCCCCCC-----CCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             422786899888644311653010120353123320351005-----738993572313685235667899999999999
Q batch____       224 QTRFTTLKEKMSAFQFQFGKTVKSEKCTVLFPSRWQDFVCGK-----DNAFLIGEAAGFISASSLEGISYALDSTDILRS  298 (354)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~liGDAa~~~~P~~G~G~~~al~~a~~la~  298 (354)
                      .+......+.+..............+................     +|+++.|+      +..|.|++.++.+|+.+++
T Consensus       406 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~g~------~~~~~~~~~av~sa~~~~e  479 (494)
T c1ltxR_         406 REDLERVVQKLFTPYTEIEEKPRLLWALYFNMRDSSDISRDCYNDLPSNVYVCSG------PDSGLGNDNAVKQAETLFQ  479 (494)
T ss_dssp             HHHHHHHHHHHCEECCSCCCCCEEEEEEEEEEEECCSCCGGGSSSCCTTEEEECC------CCSSSSSHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEECC------CCCCCCHHHHHHHHHHHHH
T ss_conf             8999999999864114555474699865551267776555544366888899778------8888998899999999999


Q ss_pred             HHHHCCC
Q ss_conf             9984777
Q batch____       299 VLLKQPE  305 (354)
Q Consensus       299 ~l~~~~~  305 (354)
                      .|....+
T Consensus       480 ~i~~~~~  486 (494)
T c1ltxR_         480 QICPNED  486 (494)
T ss_dssp             HHSSSCC
T ss_pred             HHCCCCC
T ss_conf             9748999


