Phyre 2 alignment of P31456 with c3lk7A_

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Job Description | P31456
Confidence | 90.60% | Date | Thu Jan 5 11:47:48 GMT 2012
Rank | 488 | Aligned Residues | 33
% Identity | 36% | Template | c3lk7A_
PDB info | PDB header:ligase | Chain: A: PDB Molecule:udp-n-acetylmuramoylalanine--d-glutamate ligase; | PDBTitle: the crystal structure of udp-n-acetylmuramoylalanine-d-2 glutamate (murd) ligase from streptococcus agalactiae to3 1.5a
Resolution | 1.50 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | V | A | I | I | G | L | G | P | A | G | S | A | L | A | R | K | L | A | . | G | K | M | Q | V | I | A | L | D | K | K | H | Q | C | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | L | V | L | G | L | A | R | S | G | E | A | A | A | R | L | L | A | K | L | G | A | I | V | T | V | N | D | G | K | P | F | D | E
Template Known Secondary structure |  |  |  |  |  |  |  | T | T | T |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  | S | S |  | G | G | G
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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