BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (96 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0ACZ1 Uncharacterized protein yebG n=56 Tax=Enterobact... 192 2e-48 UniRef50_B7LPJ6 DNA damage-inducible gene in SOS regulon, depend... 162 2e-39 UniRef50_C9XUJ4 Uncharacterized protein yebG n=10 Tax=Enterobact... 112 5e-24 UniRef50_A8GFL4 YebG family protein n=35 Tax=Enterobacteriaceae ... 108 4e-23 UniRef50_C8Q1I1 YebG family protein n=2 Tax=Enterobacteriaceae R... 99 5e-20 UniRef50_A0KKJ9 DNA damage-inducible gene in SOS regulon, depend... 98 8e-20 UniRef50_B2U493 YebG protein n=1 Tax=Shigella boydii CDC 3083-94... 95 8e-19 UniRef50_Q12NH3 YebG n=7 Tax=Shewanella RepID=Q12NH3_SHEDO 93 3e-18 UniRef50_B8CPH1 YebG n=6 Tax=Shewanella RepID=B8CPH1_SHEPW 91 1e-17 UniRef50_A8H3W7 YebG family protein n=6 Tax=Gammaproteobacteria ... 85 8e-16 UniRef50_C0QJ80 Putative uncharacterized protein n=1 Tax=Desulfo... 84 1e-15 UniRef50_B0TIZ1 YebG family protein n=3 Tax=Alteromonadales RepI... 84 1e-15 UniRef50_Q1ZI99 Putative uncharacterized protein n=1 Tax=Psychro... 79 3e-14 UniRef50_A1RIZ5 YebG family protein n=45 Tax=Gammaproteobacteria... 77 1e-13 UniRef50_A6W1L3 YebG family protein n=3 Tax=Gammaproteobacteria ... 72 5e-12 UniRef50_A6ARG3 YebG protein n=10 Tax=Gammaproteobacteria RepID=... 71 8e-12 UniRef50_Q47W74 Putative uncharacterized protein n=1 Tax=Colwell... 68 8e-11 UniRef50_Q5QU66 Uncharacterized conserved protein n=10 Tax=Gamma... 68 1e-10 UniRef50_B4S014 YebG family protein n=4 Tax=Alteromonadales RepI... 64 1e-09 UniRef50_A1SWU6 YebG family protein n=1 Tax=Psychromonas ingraha... 62 4e-09 UniRef50_UPI000190AA52 DNA damage-inducible protein YebG n=1 Tax... 62 5e-09 UniRef50_A4CD30 Putative DNA damage-inducible gene in SOS regulo... 54 1e-06 UniRef50_A4SMH6 Putative uncharacterized protein n=1 Tax=Aeromon... 47 2e-04 UniRef50_C5SC54 YebG family protein n=3 Tax=Allochromatium vinos... 45 0.001 UniRef50_A1U4W6 Putative uncharacterized protein n=3 Tax=Marinob... 43 0.004 UniRef50_A0Z9D7 Putative uncharacterized protein n=1 Tax=marine ... 41 0.013 UniRef50_Q48ML8 YebG family protein n=14 Tax=Pseudomonas RepID=Q... 40 0.018 UniRef50_Q2SBZ6 Uncharacterized protein conserved in bacteria n=... 39 0.068 >UniRef50_P0ACZ1 Uncharacterized protein yebG n=56 Tax=Enterobacteriaceae RepID=YEBG_ECO57 Length = 96 Score = 192 bits (489), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 96/96 (100%), Positives = 96/96 (100%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW Sbjct: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 Query: 61 LAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHAA 96 LAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHAA Sbjct: 61 LAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHAA 96 >UniRef50_B7LPJ6 DNA damage-inducible gene in SOS regulon, dependent on cyclic AMP and H-NS (Modular protein) n=32 Tax=Enterobacteriaceae RepID=B7LPJ6_ESCF3 Length = 145 Score = 162 bits (411), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 81/96 (84%), Positives = 84/96 (87%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAVEVKYVVIREGEEKMSF SKKEADAYDKMLDTAD+LDTWL SPV MED QREALSLW Sbjct: 50 MAVEVKYVVIREGEEKMSFASKKEADAYDKMLDTADMLDTWLACSPVHMEDAQREALSLW 109 Query: 61 LAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHAA 96 LA QKDVLSTILKTGKLP+PQVV S+ ED S AA Sbjct: 110 LAGQKDVLSTILKTGKLPTPQVVEPSSDTEDDSQAA 145 >UniRef50_C9XUJ4 Uncharacterized protein yebG n=10 Tax=Enterobacteriaceae RepID=C9XUJ4_CROTZ Length = 117 Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 53/78 (67%), Positives = 64/78 (82%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAVE+KYVVIREG EKMSF SKKEADA+DKMLD A+ L+ WL +PV + Q E L+LW Sbjct: 2 MAVEIKYVVIREGVEKMSFASKKEADAWDKMLDLAEALEGWLGQAPVGFAEGQVEQLALW 61 Query: 61 LAEQKDVLSTILKTGKLP 78 +AEQKD LSTI++TG+LP Sbjct: 62 MAEQKDNLSTIVRTGRLP 79 >UniRef50_A8GFL4 YebG family protein n=35 Tax=Enterobacteriaceae RepID=A8GFL4_SERP5 Length = 107 Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 53/79 (67%), Positives = 62/79 (78%), Gaps = 1/79 (1%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAVEVKYVV+R GEEKM+F +KKEADAYDKMLD AD L WL SP+ ++DEQRE LS + Sbjct: 1 MAVEVKYVVVRNGEEKMTFATKKEADAYDKMLDLADSLGEWLQQSPLTLDDEQREGLSFF 60 Query: 61 LAEQKDVLSTILKTGKLPS 79 LAE KDVL IL+ G P+ Sbjct: 61 LAENKDVLGQILR-GAAPT 78 >UniRef50_C8Q1I1 YebG family protein n=2 Tax=Enterobacteriaceae RepID=C8Q1I1_9ENTR Length = 115 Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 48/80 (60%), Positives = 60/80 (75%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAVE KYVV+R+GEEKM+F +KK+ADA+DKMLD AD WL + +M++ Q EAL L Sbjct: 1 MAVETKYVVVRKGEEKMTFANKKDADAWDKMLDMADAFTDWLLQNNPEMDEGQAEALGLQ 60 Query: 61 LAEQKDVLSTILKTGKLPSP 80 LAEQKD + IL+T KLP P Sbjct: 61 LAEQKDAVQHILRTSKLPEP 80 >UniRef50_A0KKJ9 DNA damage-inducible gene in SOS regulon, dependent on cyclic AMP and H-NS n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KKJ9_AERHH Length = 104 Score = 98.2 bits (243), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 45/76 (59%), Positives = 61/76 (80%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAVE+KYVV+R G EKM+F SKKEADAYDK+LDTAD L L +PV++E +Q+E+L+ + Sbjct: 1 MAVEIKYVVVRGGVEKMTFASKKEADAYDKLLDTADELMHLLAGAPVRLEPDQQESLAFY 60 Query: 61 LAEQKDVLSTILKTGK 76 LAEQ+D+L +L+ K Sbjct: 61 LAEQRDLLQNVLRGAK 76 >UniRef50_B2U493 YebG protein n=1 Tax=Shigella boydii CDC 3083-94 RepID=B2U493_SHIB3 Length = 60 Score = 94.7 bits (234), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 54/80 (67%), Positives = 54/80 (67%), Gaps = 26/80 (32%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAVEVKYVVIREGEEKMSFTSKKEA EQREALSLW Sbjct: 1 MAVEVKYVVIREGEEKMSFTSKKEA--------------------------EQREALSLW 34 Query: 61 LAEQKDVLSTILKTGKLPSP 80 LAEQKDVLSTILKTGKLPSP Sbjct: 35 LAEQKDVLSTILKTGKLPSP 54 >UniRef50_Q12NH3 YebG n=7 Tax=Shewanella RepID=Q12NH3_SHEDO Length = 99 Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 48/87 (55%), Positives = 63/87 (72%), Gaps = 3/87 (3%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAV ++VV+REG EKM+FTSKKEADAYDKMLD AD L +L SP+ +++ Q E L+ + Sbjct: 1 MAVVTQFVVVREGVEKMTFTSKKEADAYDKMLDIADNLIPFLLESPLTLDEAQCEQLAFY 60 Query: 61 LAEQKDVLSTILKTGKLPSPQVVGAES 87 +AEQKD LS +LK SP V ++S Sbjct: 61 MAEQKDALSGLLKGA---SPAVAQSKS 84 >UniRef50_B8CPH1 YebG n=6 Tax=Shewanella RepID=B8CPH1_SHEPW Length = 107 Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 48/86 (55%), Positives = 60/86 (69%), Gaps = 4/86 (4%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAV K+VV+REG EKM+FTSKKEADAYDKMLD AD L +LTN + +ED E L + Sbjct: 15 MAVITKFVVVREGVEKMTFTSKKEADAYDKMLDIADNLIPFLTNPELGLEDNDIEKLGFF 74 Query: 61 LAEQKDVLSTILKTG----KLPSPQV 82 LA+ KD L ++LK G K P+ +V Sbjct: 75 LAQHKDELQSLLKGGAAVSKAPAKKV 100 >UniRef50_A8H3W7 YebG family protein n=6 Tax=Gammaproteobacteria RepID=A8H3W7_SHEPA Length = 96 Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 43/77 (55%), Positives = 56/77 (72%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAV ++VV+REG EKM+FTSKKEADAYDKMLD AD L +L+ S + +E++ E L + Sbjct: 1 MAVITQFVVVREGVEKMTFTSKKEADAYDKMLDIADNLIPFLSKSDLDLEEKDIEKLGFF 60 Query: 61 LAEQKDVLSTILKTGKL 77 LA+ KD L +LK G L Sbjct: 61 LAQNKDDLQVLLKGGSL 77 >UniRef50_C0QJ80 Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJ80_DESAH Length = 107 Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 39/79 (49%), Positives = 59/79 (74%), Gaps = 1/79 (1%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAV V+Y+V+R G EKM+F +KKEADA+DKMLD AD L +L S +++ D+Q E ++L Sbjct: 1 MAVVVQYIVVRNGVEKMTFATKKEADAHDKMLDIADNLSAFLKASKIKLSDDQNEEIALL 60 Query: 61 LAEQKDVLSTILKTGKLPS 79 LA+++D ++ +L+ G PS Sbjct: 61 LAQERDTVTALLR-GVAPS 78 >UniRef50_B0TIZ1 YebG family protein n=3 Tax=Alteromonadales RepID=B0TIZ1_SHEHH Length = 96 Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 43/77 (55%), Positives = 56/77 (72%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAV ++VV+REG EKM+FTSKKEADAYDKMLD AD L +L+ S + +E+ E L+ + Sbjct: 1 MAVVTQFVVVREGVEKMTFTSKKEADAYDKMLDIADNLIPFLSKSDLGLEEVNIEKLAFF 60 Query: 61 LAEQKDVLSTILKTGKL 77 LAE K+ L +LK G L Sbjct: 61 LAENKEDLQVLLKGGSL 77 >UniRef50_Q1ZI99 Putative uncharacterized protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZI99_9GAMM Length = 123 Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 39/73 (53%), Positives = 55/73 (75%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 +AV +KY+V R+G EKM+F+SKKEADAYDKMLD+AD L +L S V +++ Q E L L+ Sbjct: 38 VAVIIKYIVERKGVEKMTFSSKKEADAYDKMLDSADQLAAFLAQSSVTLDEVQLEELGLY 97 Query: 61 LAEQKDVLSTILK 73 LA K+V+ ++ K Sbjct: 98 LASNKEVVQSLFK 110 >UniRef50_A1RIZ5 YebG family protein n=45 Tax=Gammaproteobacteria RepID=A1RIZ5_SHESW Length = 99 Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 41/87 (47%), Positives = 56/87 (64%), Gaps = 4/87 (4%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAV ++VV+REG EKM+FTSKKEADAYDKMLD AD L ++ S + +++ E L+ + Sbjct: 1 MAVITQFVVVREGVEKMTFTSKKEADAYDKMLDIADNLIPFIQKSELGIDESLSERLAFY 60 Query: 61 LAEQKDVLSTILK----TGKLPSPQVV 83 A KD L+ +LK P+ Q V Sbjct: 61 FASNKDELTNLLKGVVQVNSTPTNQAV 87 >UniRef50_A6W1L3 YebG family protein n=3 Tax=Gammaproteobacteria RepID=A6W1L3_MARMS Length = 139 Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 38/66 (57%), Positives = 49/66 (74%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 M V +KYVV R+G EKM+FTSK EADAYDK+LDTA+ L L S + + Q+EALS++ Sbjct: 1 MPVIIKYVVERDGIEKMTFTSKVEADAYDKLLDTAEALYEILDQSELAGDHSQKEALSMY 60 Query: 61 LAEQKD 66 LA+ KD Sbjct: 61 LAQNKD 66 >UniRef50_A6ARG3 YebG protein n=10 Tax=Gammaproteobacteria RepID=A6ARG3_VIBHA Length = 99 Score = 71.2 bits (173), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 38/66 (57%), Positives = 50/66 (75%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAV VKYVV R GEEKM+FTSK EADAYDKMLD AD L + L S + ++ ++E L+++ Sbjct: 1 MAVIVKYVVERNGEEKMTFTSKAEADAYDKMLDMADELFSLLGKSELLEDEGKQEDLAMY 60 Query: 61 LAEQKD 66 LA+ K+ Sbjct: 61 LAQNKE 66 >UniRef50_Q47W74 Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47W74_COLP3 Length = 122 Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 3/84 (3%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAVE ++VVIR G E +F KK AD YDKMLD AD L + S V++ D E LS++ Sbjct: 1 MAVESRFVVIRNGVEAKTFMDKKSADEYDKMLDMADNLSQMFSQSSVELSDNANEELSIF 60 Query: 61 LAEQK-DVLSTILKTGKLPSPQVV 83 LA+ + +VL +L K P+ ++ Sbjct: 61 LAQHREEVLVALL--AKKPTKAII 82 >UniRef50_Q5QU66 Uncharacterized conserved protein n=10 Tax=Gammaproteobacteria RepID=Q5QU66_IDILO Length = 104 Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 32/66 (48%), Positives = 52/66 (78%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAV +YVVIR+G EKM+FTSK EADA+DK+LD A+ L+ + +S + +++Q E ++L+ Sbjct: 1 MAVVTQYVVIRDGAEKMTFTSKAEADAHDKILDMAEALNPLIKSSELFTDEQQLEDMALF 60 Query: 61 LAEQKD 66 LA++++ Sbjct: 61 LAKERE 66 >UniRef50_B4S014 YebG family protein n=4 Tax=Alteromonadales RepID=B4S014_ALTMD Length = 95 Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 32/73 (43%), Positives = 47/73 (64%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MA+ +YVV +G EK+ T KKEAD YDKMLD AD L ++ ++++D E L++ Sbjct: 1 MAITTQYVVTHKGVEKLVTTDKKEADQYDKMLDAADNLADYIQAKGIKLDDSTVEELTIM 60 Query: 61 LAEQKDVLSTILK 73 L++ KD +S I K Sbjct: 61 LSKNKDKISKIFK 73 >UniRef50_A1SWU6 YebG family protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SWU6_PSYIN Length = 71 Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 31/65 (47%), Positives = 46/65 (70%), Gaps = 1/65 (1%) Query: 17 MSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLWLAEQKDVLSTILKTGK 76 M+FTSKKEADAYDKMLD+AD L ++ S + ++D+Q E L L+LA K+ + ++ K G Sbjct: 1 MTFTSKKEADAYDKMLDSADQLAEFIGASTITLDDQQLEELGLYLASNKEAVMSLFK-GN 59 Query: 77 LPSPQ 81 +P+ Sbjct: 60 SFTPE 64 >UniRef50_UPI000190AA52 DNA damage-inducible protein YebG n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. 404ty RepID=UPI000190AA52 Length = 61 Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 32/45 (71%), Positives = 35/45 (77%), Gaps = 2/45 (4%) Query: 51 DEQREALSLWLAEQKDVLSTILKTGKLPSPQVV--GAESEEEDAS 93 D QREALSLW+AE K+VLSTILKTGKLPSPQ V S+ E AS Sbjct: 1 DGQREALSLWMAEHKEVLSTILKTGKLPSPQAVEKAPRSKNEKAS 45 >UniRef50_A4CD30 Putative DNA damage-inducible gene in SOS regulon, dependent on cyclic AMP and H-NS n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CD30_9GAMM Length = 90 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 28/57 (49%), Positives = 41/57 (71%) Query: 17 MSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLWLAEQKDVLSTILK 73 M+FTSKK+ADAYDKMLD A+ L+ L+ V + ++Q E+L+L +A+ KD + LK Sbjct: 1 MTFTSKKDADAYDKMLDIAESLEAILSTINVPLSEQQVESLALEMAKDKDNIINALK 57 >UniRef50_A4SMH6 Putative uncharacterized protein n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SMH6_AERS4 Length = 68 Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 27/37 (72%) Query: 40 TWLTNSPVQMEDEQREALSLWLAEQKDVLSTILKTGK 76 T L +PV +E EQ+E L+ +LAEQ+DVL +L+ GK Sbjct: 2 TLLAGAPVNLEPEQQETLAFYLAEQRDVLQNVLRGGK 38 >UniRef50_C5SC54 YebG family protein n=3 Tax=Allochromatium vinosum DSM 180 RepID=C5SC54_CHRVI Length = 108 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%) Query: 3 VEVKYVVI-REGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPV--QMEDEQREALSL 59 +E++Y+V R G E++ KK A+AYD++L+ A+ L WL V + D++ E L++ Sbjct: 2 IEIEYIVRDRRGVERLRTADKKAAEAYDRILENAERLADWLRAGSVLPSLPDDELETLTV 61 Query: 60 WLAEQKDVLSTILKTGKLPS 79 LA + ILK L S Sbjct: 62 HLARHAREVELILKGKPLES 81 >UniRef50_A1U4W6 Putative uncharacterized protein n=3 Tax=Marinobacter RepID=A1U4W6_MARAV Length = 92 Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 7/89 (7%) Query: 1 MAVEVKYVVIREG-------EEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQ 53 M V+ Y R+G +KM F+SK EADA DK+L+ ++ + T+L + +E Sbjct: 1 MGVKALYYSERDGLDMALKNPDKMLFSSKAEADARDKVLELSEEITTFLQRKVGGLSEEL 60 Query: 54 REALSLWLAEQKDVLSTILKTGKLPSPQV 82 E +L +AE+KD+ + +K +L + V Sbjct: 61 AEQCALAIAEEKDLFTKAMKKPELLNETV 89 >UniRef50_A0Z9D7 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z9D7_9GAMM Length = 84 Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 7/79 (8%) Query: 19 FTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLWLAEQKDVLSTILKTGKLP 78 F SKK+ADA+DKML+ AD T + ++ E + L L+ K VL K Sbjct: 2 FDSKKDADAHDKMLELADGFRTLFETQVEGISEQDAENIGLLLSMNKHVLIAACKG---- 57 Query: 79 SPQVVGA---ESEEEDASH 94 +P ++G ++EEE AS+ Sbjct: 58 NPDLLGGIGQDNEEETASN 76 >UniRef50_Q48ML8 YebG family protein n=14 Tax=Pseudomonas RepID=Q48ML8_PSE14 Length = 88 Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 4/76 (5%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLL-DTWLTNSPVQMEDEQREALSL 59 MAVE Y R+ E +F +K ADA+D+ML+ A+LL D + N P + ++ E S+ Sbjct: 1 MAVETLYRSTRDLE--TTFVDRKLADAHDQMLELAELLTDVLIKNVP-GISEKHAEDASI 57 Query: 60 WLAEQKDVLSTILKTG 75 ++A+ + V + K Sbjct: 58 YMAKNRAVFAAAFKNN 73 >UniRef50_Q2SBZ6 Uncharacterized protein conserved in bacteria n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SBZ6_HAHCH Length = 112 Score = 38.5 bits (88), Expect = 0.068, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 2/77 (2%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAV Y+ R+ ++M F SKKEAD +DK L+ A+ + +L + + E + + Sbjct: 1 MAVVTLYMSDRDPSQQM-FKSKKEADEHDKKLELAEGVSHFLAQRLTSLNEGLAEEIGML 59 Query: 61 LAEQKDVLSTILKTGKL 77 +A K+ +T K GK+ Sbjct: 60 VANHKEAFATAFK-GKV 75 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B7LPJ6 DNA damage-inducible gene in SOS regulon, depend... 151 7e-36 UniRef50_P0ACZ1 Uncharacterized protein yebG n=56 Tax=Enterobact... 130 1e-29 UniRef50_B8CPH1 YebG n=6 Tax=Shewanella RepID=B8CPH1_SHEPW 119 2e-26 UniRef50_A1RIZ5 YebG family protein n=45 Tax=Gammaproteobacteria... 117 1e-25 UniRef50_C9XUJ4 Uncharacterized protein yebG n=10 Tax=Enterobact... 113 2e-24 UniRef50_A8H3W7 YebG family protein n=6 Tax=Gammaproteobacteria ... 111 7e-24 UniRef50_Q12NH3 YebG n=7 Tax=Shewanella RepID=Q12NH3_SHEDO 110 2e-23 UniRef50_B0TIZ1 YebG family protein n=3 Tax=Alteromonadales RepI... 107 2e-22 UniRef50_A8GFL4 YebG family protein n=35 Tax=Enterobacteriaceae ... 106 2e-22 UniRef50_A0KKJ9 DNA damage-inducible gene in SOS regulon, depend... 106 3e-22 UniRef50_Q1ZI99 Putative uncharacterized protein n=1 Tax=Psychro... 105 6e-22 UniRef50_C8Q1I1 YebG family protein n=2 Tax=Enterobacteriaceae R... 103 1e-21 UniRef50_C0QJ80 Putative uncharacterized protein n=1 Tax=Desulfo... 97 2e-19 UniRef50_B4S014 YebG family protein n=4 Tax=Alteromonadales RepI... 90 1e-17 UniRef50_Q47W74 Putative uncharacterized protein n=1 Tax=Colwell... 88 7e-17 UniRef50_A6W1L3 YebG family protein n=3 Tax=Gammaproteobacteria ... 87 1e-16 UniRef50_Q5QU66 Uncharacterized conserved protein n=10 Tax=Gamma... 84 1e-15 UniRef50_A6ARG3 YebG protein n=10 Tax=Gammaproteobacteria RepID=... 84 1e-15 UniRef50_A1SWU6 YebG family protein n=1 Tax=Psychromonas ingraha... 79 4e-14 UniRef50_C5SC54 YebG family protein n=3 Tax=Allochromatium vinos... 78 7e-14 UniRef50_B2U493 YebG protein n=1 Tax=Shigella boydii CDC 3083-94... 76 4e-13 UniRef50_A4CD30 Putative DNA damage-inducible gene in SOS regulo... 67 2e-10 UniRef50_UPI000190AA52 DNA damage-inducible protein YebG n=1 Tax... 62 9e-09 UniRef50_A4SMH6 Putative uncharacterized protein n=1 Tax=Aeromon... 47 3e-04 Sequences not found previously or not previously below threshold: UniRef50_Q2SBZ6 Uncharacterized protein conserved in bacteria n=... 55 7e-07 UniRef50_A0YA49 Putative uncharacterized protein n=1 Tax=marine ... 54 1e-06 UniRef50_Q21MZ3 YebG n=2 Tax=Gammaproteobacteria RepID=Q21MZ3_SACD2 53 2e-06 UniRef50_Q48ML8 YebG family protein n=14 Tax=Pseudomonas RepID=Q... 52 4e-06 UniRef50_A0Z9D7 Putative uncharacterized protein n=1 Tax=marine ... 50 2e-05 UniRef50_Q4KI27 Putative uncharacterized protein n=7 Tax=Pseudom... 49 5e-05 UniRef50_C5BMU4 YebG n=2 Tax=Gammaproteobacteria RepID=C5BMU4_TERTT 48 7e-05 UniRef50_A1U4W6 Putative uncharacterized protein n=3 Tax=Marinob... 47 2e-04 >UniRef50_B7LPJ6 DNA damage-inducible gene in SOS regulon, dependent on cyclic AMP and H-NS (Modular protein) n=32 Tax=Enterobacteriaceae RepID=B7LPJ6_ESCF3 Length = 145 Score = 151 bits (381), Expect = 7e-36, Method: Composition-based stats. Identities = 81/96 (84%), Positives = 84/96 (87%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAVEVKYVVIREGEEKMSF SKKEADAYDKMLDTAD+LDTWL SPV MED QREALSLW Sbjct: 50 MAVEVKYVVIREGEEKMSFASKKEADAYDKMLDTADMLDTWLACSPVHMEDAQREALSLW 109 Query: 61 LAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHAA 96 LA QKDVLSTILKTGKLP+PQVV S+ ED S AA Sbjct: 110 LAGQKDVLSTILKTGKLPTPQVVEPSSDTEDDSQAA 145 >UniRef50_P0ACZ1 Uncharacterized protein yebG n=56 Tax=Enterobacteriaceae RepID=YEBG_ECO57 Length = 96 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 96/96 (100%), Positives = 96/96 (100%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW Sbjct: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 Query: 61 LAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHAA 96 LAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHAA Sbjct: 61 LAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHAA 96 >UniRef50_B8CPH1 YebG n=6 Tax=Shewanella RepID=B8CPH1_SHEPW Length = 107 Score = 119 bits (299), Expect = 2e-26, Method: Composition-based stats. Identities = 47/89 (52%), Positives = 59/89 (66%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAV K+VV+REG EKM+FTSKKEADAYDKMLD AD L +LTN + +ED E L + Sbjct: 15 MAVITKFVVVREGVEKMTFTSKKEADAYDKMLDIADNLIPFLTNPELGLEDNDIEKLGFF 74 Query: 61 LAEQKDVLSTILKTGKLPSPQVVGAESEE 89 LA+ KD L ++LK G S S++ Sbjct: 75 LAQHKDELQSLLKGGAAVSKAPAKKVSKK 103 >UniRef50_A1RIZ5 YebG family protein n=45 Tax=Gammaproteobacteria RepID=A1RIZ5_SHESW Length = 99 Score = 117 bits (292), Expect = 1e-25, Method: Composition-based stats. Identities = 41/87 (47%), Positives = 56/87 (64%), Gaps = 4/87 (4%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAV ++VV+REG EKM+FTSKKEADAYDKMLD AD L ++ S + +++ E L+ + Sbjct: 1 MAVITQFVVVREGVEKMTFTSKKEADAYDKMLDIADNLIPFIQKSELGIDESLSERLAFY 60 Query: 61 LAEQKDVLSTILKT----GKLPSPQVV 83 A KD L+ +LK P+ Q V Sbjct: 61 FASNKDELTNLLKGVVQVNSTPTNQAV 87 >UniRef50_C9XUJ4 Uncharacterized protein yebG n=10 Tax=Enterobacteriaceae RepID=C9XUJ4_CROTZ Length = 117 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 53/78 (67%), Positives = 64/78 (82%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAVE+KYVVIREG EKMSF SKKEADA+DKMLD A+ L+ WL +PV + Q E L+LW Sbjct: 2 MAVEIKYVVIREGVEKMSFASKKEADAWDKMLDLAEALEGWLGQAPVGFAEGQVEQLALW 61 Query: 61 LAEQKDVLSTILKTGKLP 78 +AEQKD LSTI++TG+LP Sbjct: 62 MAEQKDNLSTIVRTGRLP 79 >UniRef50_A8H3W7 YebG family protein n=6 Tax=Gammaproteobacteria RepID=A8H3W7_SHEPA Length = 96 Score = 111 bits (278), Expect = 7e-24, Method: Composition-based stats. Identities = 47/96 (48%), Positives = 62/96 (64%), Gaps = 5/96 (5%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAV ++VV+REG EKM+FTSKKEADAYDKMLD AD L +L+ S + +E++ E L + Sbjct: 1 MAVITQFVVVREGVEKMTFTSKKEADAYDKMLDIADNLIPFLSKSDLDLEEKDIEKLGFF 60 Query: 61 LAEQKDVLSTILKTGKL-----PSPQVVGAESEEED 91 LA+ KD L +LK G L P V +S+E Sbjct: 61 LAQNKDDLQVLLKGGSLEKKVTPKKAVKKPDSKEPK 96 >UniRef50_Q12NH3 YebG n=7 Tax=Shewanella RepID=Q12NH3_SHEDO Length = 99 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 48/91 (52%), Positives = 63/91 (69%), Gaps = 3/91 (3%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAV ++VV+REG EKM+FTSKKEADAYDKMLD AD L +L SP+ +++ Q E L+ + Sbjct: 1 MAVVTQFVVVREGVEKMTFTSKKEADAYDKMLDIADNLIPFLLESPLTLDEAQCEQLAFY 60 Query: 61 LAEQKDVLSTILKTGKLPSPQVVGAESEEED 91 +AEQKD LS +LK SP V ++S Sbjct: 61 MAEQKDALSGLLKGA---SPAVAQSKSVTAK 88 >UniRef50_B0TIZ1 YebG family protein n=3 Tax=Alteromonadales RepID=B0TIZ1_SHEHH Length = 96 Score = 107 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 43/78 (55%), Positives = 56/78 (71%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAV ++VV+REG EKM+FTSKKEADAYDKMLD AD L +L+ S + +E+ E L+ + Sbjct: 1 MAVVTQFVVVREGVEKMTFTSKKEADAYDKMLDIADNLIPFLSKSDLGLEEVNIEKLAFF 60 Query: 61 LAEQKDVLSTILKTGKLP 78 LAE K+ L +LK G L Sbjct: 61 LAENKEDLQVLLKGGSLE 78 >UniRef50_A8GFL4 YebG family protein n=35 Tax=Enterobacteriaceae RepID=A8GFL4_SERP5 Length = 107 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 53/91 (58%), Positives = 63/91 (69%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAVEVKYVV+R GEEKM+F +KKEADAYDKMLD AD L WL SP+ ++DEQRE LS + Sbjct: 1 MAVEVKYVVVRNGEEKMTFATKKEADAYDKMLDLADSLGEWLQQSPLTLDDEQREGLSFF 60 Query: 61 LAEQKDVLSTILKTGKLPSPQVVGAESEEED 91 LAE KDVL IL+ A+ + E Sbjct: 61 LAENKDVLGQILRGAAPTEAPKKSAKVKTEK 91 >UniRef50_A0KKJ9 DNA damage-inducible gene in SOS regulon, dependent on cyclic AMP and H-NS n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KKJ9_AERHH Length = 104 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 45/76 (59%), Positives = 61/76 (80%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAVE+KYVV+R G EKM+F SKKEADAYDK+LDTAD L L +PV++E +Q+E+L+ + Sbjct: 1 MAVEIKYVVVRGGVEKMTFASKKEADAYDKLLDTADELMHLLAGAPVRLEPDQQESLAFY 60 Query: 61 LAEQKDVLSTILKTGK 76 LAEQ+D+L +L+ K Sbjct: 61 LAEQRDLLQNVLRGAK 76 >UniRef50_Q1ZI99 Putative uncharacterized protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZI99_9GAMM Length = 123 Score = 105 bits (261), Expect = 6e-22, Method: Composition-based stats. Identities = 39/79 (49%), Positives = 56/79 (70%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 +AV +KY+V R+G EKM+F+SKKEADAYDKMLD+AD L +L S V +++ Q E L L+ Sbjct: 38 VAVIIKYIVERKGVEKMTFSSKKEADAYDKMLDSADQLAAFLAQSSVTLDEVQLEELGLY 97 Query: 61 LAEQKDVLSTILKTGKLPS 79 LA K+V+ ++ K + Sbjct: 98 LASNKEVVQSLFKGNDYET 116 >UniRef50_C8Q1I1 YebG family protein n=2 Tax=Enterobacteriaceae RepID=C8Q1I1_9ENTR Length = 115 Score = 103 bits (258), Expect = 1e-21, Method: Composition-based stats. Identities = 50/92 (54%), Positives = 63/92 (68%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAVE KYVV+R+GEEKM+F +KK+ADA+DKMLD AD WL + +M++ Q EAL L Sbjct: 1 MAVETKYVVVRKGEEKMTFANKKDADAWDKMLDMADAFTDWLLQNNPEMDEGQAEALGLQ 60 Query: 61 LAEQKDVLSTILKTGKLPSPQVVGAESEEEDA 92 LAEQKD + IL+T KLP P + E A Sbjct: 61 LAEQKDAVQHILRTSKLPEPVNAEETAPGETA 92 >UniRef50_C0QJ80 Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJ80_DESAH Length = 107 Score = 97.0 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 1/87 (1%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAV V+Y+V+R G EKM+F +KKEADA+DKMLD AD L +L S +++ D+Q E ++L Sbjct: 1 MAVVVQYIVVRNGVEKMTFATKKEADAHDKMLDIADNLSAFLKASKIKLSDDQNEEIALL 60 Query: 61 LAEQKDVLSTILKTGKLPSPQVVGAES 87 LA+++D ++ +L+ G PS ++ Sbjct: 61 LAQERDTVTALLR-GVAPSTASAKKKA 86 >UniRef50_B4S014 YebG family protein n=4 Tax=Alteromonadales RepID=B4S014_ALTMD Length = 95 Score = 90.5 bits (223), Expect = 1e-17, Method: Composition-based stats. Identities = 33/79 (41%), Positives = 48/79 (60%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MA+ +YVV +G EK+ T KKEAD YDKMLD AD L ++ ++++D E L++ Sbjct: 1 MAITTQYVVTHKGVEKLVTTDKKEADQYDKMLDAADNLADYIQAKGIKLDDSTVEELTIM 60 Query: 61 LAEQKDVLSTILKTGKLPS 79 L++ KD +S I K S Sbjct: 61 LSKNKDKISKIFKGATAES 79 >UniRef50_Q47W74 Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47W74_COLP3 Length = 122 Score = 88.1 bits (217), Expect = 7e-17, Method: Composition-based stats. Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 1/89 (1%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAVE ++VVIR G E +F KK AD YDKMLD AD L + S V++ D E LS++ Sbjct: 1 MAVESRFVVIRNGVEAKTFMDKKSADEYDKMLDMADNLSQMFSQSSVELSDNANEELSIF 60 Query: 61 LAEQKDVLSTILKTGKLPSPQVVGAESEE 89 LA+ ++ + L K P+ ++ E+ Sbjct: 61 LAQHREEVLVAL-LAKKPTKAIIKKSVEK 88 >UniRef50_A6W1L3 YebG family protein n=3 Tax=Gammaproteobacteria RepID=A6W1L3_MARMS Length = 139 Score = 87.4 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 38/72 (52%), Positives = 51/72 (70%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 M V +KYVV R+G EKM+FTSK EADAYDK+LDTA+ L L S + + Q+EALS++ Sbjct: 1 MPVIIKYVVERDGIEKMTFTSKVEADAYDKLLDTAEALYEILDQSELAGDHSQKEALSMY 60 Query: 61 LAEQKDVLSTIL 72 LA+ KD + + Sbjct: 61 LAQNKDSILDVF 72 >UniRef50_Q5QU66 Uncharacterized conserved protein n=10 Tax=Gammaproteobacteria RepID=Q5QU66_IDILO Length = 104 Score = 84.3 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 40/96 (41%), Positives = 65/96 (67%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAV +YVVIR+G EKM+FTSK EADA+DK+LD A+ L+ + +S + +++Q E ++L+ Sbjct: 1 MAVVTQYVVIRDGAEKMTFTSKAEADAHDKILDMAEALNPLIKSSELFTDEQQLEDMALF 60 Query: 61 LAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHAA 96 LA++++ + L K P+ A +E+ +AS A Sbjct: 61 LAKERENILIALGAKKPKKPKTEKASTEKVEASKPA 96 >UniRef50_A6ARG3 YebG protein n=10 Tax=Gammaproteobacteria RepID=A6ARG3_VIBHA Length = 99 Score = 83.9 bits (206), Expect = 1e-15, Method: Composition-based stats. Identities = 47/99 (47%), Positives = 66/99 (66%), Gaps = 6/99 (6%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAV VKYVV R GEEKM+FTSK EADAYDKMLD AD L + L S + ++ ++E L+++ Sbjct: 1 MAVIVKYVVERNGEEKMTFTSKAEADAYDKMLDMADELFSLLGKSELLEDEGKQEDLAMY 60 Query: 61 LAEQKDVLSTILKTGKLPSP------QVVGAESEEEDAS 93 LA+ K+ + L + P+P + V +SE+EDA+ Sbjct: 61 LAQNKEEVLYALGAKRKPAPKKAKKLEAVEEDSEQEDAA 99 >UniRef50_A1SWU6 YebG family protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SWU6_PSYIN Length = 71 Score = 79.3 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 29/60 (48%), Positives = 42/60 (70%) Query: 17 MSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLWLAEQKDVLSTILKTGK 76 M+FTSKKEADAYDKMLD+AD L ++ S + ++D+Q E L L+LA K+ + ++ K Sbjct: 1 MTFTSKKEADAYDKMLDSADQLAEFIGASTITLDDQQLEELGLYLASNKEAVMSLFKGNS 60 >UniRef50_C5SC54 YebG family protein n=3 Tax=Allochromatium vinosum DSM 180 RepID=C5SC54_CHRVI Length = 108 Score = 78.1 bits (191), Expect = 7e-14, Method: Composition-based stats. Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%) Query: 3 VEVKYVVI-REGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPV--QMEDEQREALSL 59 +E++Y+V R G E++ KK A+AYD++L+ A+ L WL V + D++ E L++ Sbjct: 2 IEIEYIVRDRRGVERLRTADKKAAEAYDRILENAERLADWLRAGSVLPSLPDDELETLTV 61 Query: 60 WLAEQKDVLSTILKTGKLPS 79 LA + ILK L S Sbjct: 62 HLARHAREVELILKGKPLES 81 >UniRef50_B2U493 YebG protein n=1 Tax=Shigella boydii CDC 3083-94 RepID=B2U493_SHIB3 Length = 60 Score = 75.8 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 53/80 (66%), Positives = 54/80 (67%), Gaps = 26/80 (32%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAVEVKYVVIREGEEKMSFTSKKEA+ QREALSLW Sbjct: 1 MAVEVKYVVIREGEEKMSFTSKKEAE--------------------------QREALSLW 34 Query: 61 LAEQKDVLSTILKTGKLPSP 80 LAEQKDVLSTILKTGKLPSP Sbjct: 35 LAEQKDVLSTILKTGKLPSP 54 >UniRef50_A4CD30 Putative DNA damage-inducible gene in SOS regulon, dependent on cyclic AMP and H-NS n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CD30_9GAMM Length = 90 Score = 67.0 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 28/58 (48%), Positives = 41/58 (70%) Query: 17 MSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLWLAEQKDVLSTILKT 74 M+FTSKK+ADAYDKMLD A+ L+ L+ V + ++Q E+L+L +A+ KD + LK Sbjct: 1 MTFTSKKDADAYDKMLDIAESLEAILSTINVPLSEQQVESLALEMAKDKDNIINALKG 58 >UniRef50_UPI000190AA52 DNA damage-inducible protein YebG n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. 404ty RepID=UPI000190AA52 Length = 61 Score = 61.6 bits (148), Expect = 9e-09, Method: Composition-based stats. Identities = 32/46 (69%), Positives = 35/46 (76%), Gaps = 2/46 (4%) Query: 51 DEQREALSLWLAEQKDVLSTILKTGKLPSPQVVG--AESEEEDASH 94 D QREALSLW+AE K+VLSTILKTGKLPSPQ V S+ E AS Sbjct: 1 DGQREALSLWMAEHKEVLSTILKTGKLPSPQAVEKAPRSKNEKASR 46 >UniRef50_Q2SBZ6 Uncharacterized protein conserved in bacteria n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SBZ6_HAHCH Length = 112 Score = 55.0 bits (131), Expect = 7e-07, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 9/104 (8%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAV Y+ R+ ++M F SKKEAD +DK L+ A+ + +L + + E + + Sbjct: 1 MAVVTLYMSDRDPSQQM-FKSKKEADEHDKKLELAEGVSHFLAQRLTSLNEGLAEEIGML 59 Query: 61 LAEQKDVLSTILKTG--------KLPSPQVVGAESEEEDASHAA 96 +A K+ +T K P+P + + Sbjct: 60 VANHKEAFATAFKGKVDVLFEESPEPAPNAEEETKDNAKVKESG 103 >UniRef50_A0YA49 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YA49_9GAMM Length = 96 Score = 54.2 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 3/87 (3%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAV + R+G F KK+ADAYDKML+ + L + ++++ EA L Sbjct: 1 MAVVAIWKCDRDGS---MFEDKKQADAYDKMLELGEQFTALLESQIDGVDEKSAEAFGLL 57 Query: 61 LAEQKDVLSTILKTGKLPSPQVVGAES 87 LA K+++ K Q++ S Sbjct: 58 LANNKELIMQACKGKTEALDQLIKPGS 84 >UniRef50_Q21MZ3 YebG n=2 Tax=Gammaproteobacteria RepID=Q21MZ3_SACD2 Length = 97 Score = 53.5 bits (127), Expect = 2e-06, Method: Composition-based stats. Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 3/94 (3%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAV + R+G F KK ADA+DKML+ A+ + + + + + E + L Sbjct: 1 MAVIAVWKCDRDGS---MFEDKKLADAHDKMLELAESITRLIEANVPGVSEADVETIGLL 57 Query: 61 LAEQKDVLSTILKTGKLPSPQVVGAESEEEDASH 94 LA++ D L K + ++E+E AS+ Sbjct: 58 LAKRSDDLIKACKGKPEVLLANLDGDAEDESASN 91 >UniRef50_Q48ML8 YebG family protein n=14 Tax=Pseudomonas RepID=Q48ML8_PSE14 Length = 88 Score = 52.3 bits (124), Expect = 4e-06, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 2/89 (2%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAVE Y R+ E +F +K ADA+D+ML+ A+LL L + + ++ E S++ Sbjct: 1 MAVETLYRSTRDLET--TFVDRKLADAHDQMLELAELLTDVLIKNVPGISEKHAEDASIY 58 Query: 61 LAEQKDVLSTILKTGKLPSPQVVGAESEE 89 +A+ + V + K ++ E Sbjct: 59 MAKNRAVFAAAFKNNATALSELSEPAESE 87 >UniRef50_A0Z9D7 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z9D7_9GAMM Length = 84 Score = 50.0 bits (118), Expect = 2e-05, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 29/58 (50%) Query: 19 FTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLWLAEQKDVLSTILKTGK 76 F SKK+ADA+DKML+ AD T + ++ E + L L+ K VL K Sbjct: 2 FDSKKDADAHDKMLELADGFRTLFETQVEGISEQDAENIGLLLSMNKHVLIAACKGNP 59 >UniRef50_Q4KI27 Putative uncharacterized protein n=7 Tax=Pseudomonas RepID=Q4KI27_PSEF5 Length = 96 Score = 48.9 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 32/57 (56%) Query: 20 TSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLWLAEQKDVLSTILKTGK 76 K EAD +DKML+ A+LL L + + ++Q E +++A+ +DV + K+ Sbjct: 1 MDKAEADRHDKMLELAELLAEVLHKAVPSLSEQQVEEAGIYMAKNRDVFAKAFKSQP 57 >UniRef50_C5BMU4 YebG n=2 Tax=Gammaproteobacteria RepID=C5BMU4_TERTT Length = 85 Score = 48.5 bits (114), Expect = 7e-05, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 38/77 (49%) Query: 19 FTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLWLAEQKDVLSTILKTGKLP 78 F KK A+A+D ML+ A + + + + DE EA+ L LA+ D L+ K Sbjct: 2 FDDKKAAEAHDNMLELAANITQLIESRISGISDENLEAIGLLLAKNSDALAKACKGKPSV 61 Query: 79 SPQVVGAESEEEDASHA 95 ++ A++E + S + Sbjct: 62 LLELEEADTETTEDSSS 78 >UniRef50_A1U4W6 Putative uncharacterized protein n=3 Tax=Marinobacter RepID=A1U4W6_MARAV Length = 92 Score = 46.9 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 7/80 (8%) Query: 1 MAVEVKYVVIREGEE-------KMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQ 53 M V+ Y R+G + KM F+SK EADA DK+L+ ++ + T+L + +E Sbjct: 1 MGVKALYYSERDGLDMALKNPDKMLFSSKAEADARDKVLELSEEITTFLQRKVGGLSEEL 60 Query: 54 REALSLWLAEQKDVLSTILK 73 E +L +AE+KD+ + +K Sbjct: 61 AEQCALAIAEEKDLFTKAMK 80 >UniRef50_A4SMH6 Putative uncharacterized protein n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SMH6_AERS4 Length = 68 Score = 46.5 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 31/54 (57%) Query: 39 DTWLTNSPVQMEDEQREALSLWLAEQKDVLSTILKTGKLPSPQVVGAESEEEDA 92 T L +PV +E EQ+E L+ +LAEQ+DVL +L+ GK + EE A Sbjct: 1 MTLLAGAPVNLEPEQQETLAFYLAEQRDVLQNVLRGGKAQGSTKEDPQPMEEKA 54 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B7LPJ6 DNA damage-inducible gene in SOS regulon, depend... 137 1e-31 UniRef50_B8CPH1 YebG n=6 Tax=Shewanella RepID=B8CPH1_SHEPW 118 7e-26 UniRef50_P0ACZ1 Uncharacterized protein yebG n=56 Tax=Enterobact... 116 2e-25 UniRef50_A1RIZ5 YebG family protein n=45 Tax=Gammaproteobacteria... 113 1e-24 UniRef50_A8H3W7 YebG family protein n=6 Tax=Gammaproteobacteria ... 109 2e-23 UniRef50_C9XUJ4 Uncharacterized protein yebG n=10 Tax=Enterobact... 108 6e-23 UniRef50_A8GFL4 YebG family protein n=35 Tax=Enterobacteriaceae ... 105 5e-22 UniRef50_Q12NH3 YebG n=7 Tax=Shewanella RepID=Q12NH3_SHEDO 104 1e-21 UniRef50_Q1ZI99 Putative uncharacterized protein n=1 Tax=Psychro... 104 1e-21 UniRef50_C8Q1I1 YebG family protein n=2 Tax=Enterobacteriaceae R... 103 2e-21 UniRef50_A0KKJ9 DNA damage-inducible gene in SOS regulon, depend... 101 9e-21 UniRef50_B0TIZ1 YebG family protein n=3 Tax=Alteromonadales RepI... 100 1e-20 UniRef50_C0QJ80 Putative uncharacterized protein n=1 Tax=Desulfo... 95 5e-19 UniRef50_Q21MZ3 YebG n=2 Tax=Gammaproteobacteria RepID=Q21MZ3_SACD2 92 6e-18 UniRef50_Q5QU66 Uncharacterized conserved protein n=10 Tax=Gamma... 90 1e-17 UniRef50_A0YA49 Putative uncharacterized protein n=1 Tax=marine ... 88 9e-17 UniRef50_A6W1L3 YebG family protein n=3 Tax=Gammaproteobacteria ... 87 1e-16 UniRef50_Q47W74 Putative uncharacterized protein n=1 Tax=Colwell... 87 2e-16 UniRef50_B4S014 YebG family protein n=4 Tax=Alteromonadales RepI... 87 2e-16 UniRef50_Q2SBZ6 Uncharacterized protein conserved in bacteria n=... 83 2e-15 UniRef50_A6ARG3 YebG protein n=10 Tax=Gammaproteobacteria RepID=... 83 3e-15 UniRef50_Q48ML8 YebG family protein n=14 Tax=Pseudomonas RepID=Q... 80 2e-14 UniRef50_A1SWU6 YebG family protein n=1 Tax=Psychromonas ingraha... 79 3e-14 UniRef50_A0Z9D7 Putative uncharacterized protein n=1 Tax=marine ... 76 4e-13 UniRef50_C5SC54 YebG family protein n=3 Tax=Allochromatium vinos... 73 3e-12 UniRef50_C5BMU4 YebG n=2 Tax=Gammaproteobacteria RepID=C5BMU4_TERTT 73 3e-12 UniRef50_B2U493 YebG protein n=1 Tax=Shigella boydii CDC 3083-94... 70 3e-11 UniRef50_A4CD30 Putative DNA damage-inducible gene in SOS regulo... 67 2e-10 UniRef50_A1U4W6 Putative uncharacterized protein n=3 Tax=Marinob... 67 3e-10 UniRef50_Q4KI27 Putative uncharacterized protein n=7 Tax=Pseudom... 65 1e-09 UniRef50_UPI000190AA52 DNA damage-inducible protein YebG n=1 Tax... 54 1e-06 UniRef50_A4SMH6 Putative uncharacterized protein n=1 Tax=Aeromon... 49 4e-05 Sequences not found previously or not previously below threshold: CONVERGED! >UniRef50_B7LPJ6 DNA damage-inducible gene in SOS regulon, dependent on cyclic AMP and H-NS (Modular protein) n=32 Tax=Enterobacteriaceae RepID=B7LPJ6_ESCF3 Length = 145 Score = 137 bits (345), Expect = 1e-31, Method: Composition-based stats. Identities = 81/96 (84%), Positives = 84/96 (87%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAVEVKYVVIREGEEKMSF SKKEADAYDKMLDTAD+LDTWL SPV MED QREALSLW Sbjct: 50 MAVEVKYVVIREGEEKMSFASKKEADAYDKMLDTADMLDTWLACSPVHMEDAQREALSLW 109 Query: 61 LAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHAA 96 LA QKDVLSTILKTGKLP+PQVV S+ ED S AA Sbjct: 110 LAGQKDVLSTILKTGKLPTPQVVEPSSDTEDDSQAA 145 >UniRef50_B8CPH1 YebG n=6 Tax=Shewanella RepID=B8CPH1_SHEPW Length = 107 Score = 118 bits (295), Expect = 7e-26, Method: Composition-based stats. Identities = 47/90 (52%), Positives = 59/90 (65%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAV K+VV+REG EKM+FTSKKEADAYDKMLD AD L +LTN + +ED E L + Sbjct: 15 MAVITKFVVVREGVEKMTFTSKKEADAYDKMLDIADNLIPFLTNPELGLEDNDIEKLGFF 74 Query: 61 LAEQKDVLSTILKTGKLPSPQVVGAESEEE 90 LA+ KD L ++LK G S S++ Sbjct: 75 LAQHKDELQSLLKGGAAVSKAPAKKVSKKT 104 >UniRef50_P0ACZ1 Uncharacterized protein yebG n=56 Tax=Enterobacteriaceae RepID=YEBG_ECO57 Length = 96 Score = 116 bits (291), Expect = 2e-25, Method: Composition-based stats. Identities = 96/96 (100%), Positives = 96/96 (100%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW Sbjct: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 Query: 61 LAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHAA 96 LAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHAA Sbjct: 61 LAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHAA 96 >UniRef50_A1RIZ5 YebG family protein n=45 Tax=Gammaproteobacteria RepID=A1RIZ5_SHESW Length = 99 Score = 113 bits (284), Expect = 1e-24, Method: Composition-based stats. Identities = 41/87 (47%), Positives = 56/87 (64%), Gaps = 4/87 (4%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAV ++VV+REG EKM+FTSKKEADAYDKMLD AD L ++ S + +++ E L+ + Sbjct: 1 MAVITQFVVVREGVEKMTFTSKKEADAYDKMLDIADNLIPFIQKSELGIDESLSERLAFY 60 Query: 61 LAEQKDVLSTILKT----GKLPSPQVV 83 A KD L+ +LK P+ Q V Sbjct: 61 FASNKDELTNLLKGVVQVNSTPTNQAV 87 >UniRef50_A8H3W7 YebG family protein n=6 Tax=Gammaproteobacteria RepID=A8H3W7_SHEPA Length = 96 Score = 109 bits (273), Expect = 2e-23, Method: Composition-based stats. Identities = 44/95 (46%), Positives = 60/95 (63%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAV ++VV+REG EKM+FTSKKEADAYDKMLD AD L +L+ S + +E++ E L + Sbjct: 1 MAVITQFVVVREGVEKMTFTSKKEADAYDKMLDIADNLIPFLSKSDLDLEEKDIEKLGFF 60 Query: 61 LAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHA 95 LA+ KD L +LK G L ++ D+ Sbjct: 61 LAQNKDDLQVLLKGGSLEKKVTPKKAVKKPDSKEP 95 >UniRef50_C9XUJ4 Uncharacterized protein yebG n=10 Tax=Enterobacteriaceae RepID=C9XUJ4_CROTZ Length = 117 Score = 108 bits (270), Expect = 6e-23, Method: Composition-based stats. Identities = 53/86 (61%), Positives = 65/86 (75%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAVE+KYVVIREG EKMSF SKKEADA+DKMLD A+ L+ WL +PV + Q E L+LW Sbjct: 2 MAVEIKYVVIREGVEKMSFASKKEADAWDKMLDLAEALEGWLGQAPVGFAEGQVEQLALW 61 Query: 61 LAEQKDVLSTILKTGKLPSPQVVGAE 86 +AEQKD LSTI++TG+LP + Sbjct: 62 MAEQKDNLSTIVRTGRLPQETSEHTD 87 >UniRef50_A8GFL4 YebG family protein n=35 Tax=Enterobacteriaceae RepID=A8GFL4_SERP5 Length = 107 Score = 105 bits (261), Expect = 5e-22, Method: Composition-based stats. Identities = 53/91 (58%), Positives = 63/91 (69%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAVEVKYVV+R GEEKM+F +KKEADAYDKMLD AD L WL SP+ ++DEQRE LS + Sbjct: 1 MAVEVKYVVVRNGEEKMTFATKKEADAYDKMLDLADSLGEWLQQSPLTLDDEQREGLSFF 60 Query: 61 LAEQKDVLSTILKTGKLPSPQVVGAESEEED 91 LAE KDVL IL+ A+ + E Sbjct: 61 LAENKDVLGQILRGAAPTEAPKKSAKVKTEK 91 >UniRef50_Q12NH3 YebG n=7 Tax=Shewanella RepID=Q12NH3_SHEDO Length = 99 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 45/90 (50%), Positives = 61/90 (67%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAV ++VV+REG EKM+FTSKKEADAYDKMLD AD L +L SP+ +++ Q E L+ + Sbjct: 1 MAVVTQFVVVREGVEKMTFTSKKEADAYDKMLDIADNLIPFLLESPLTLDEAQCEQLAFY 60 Query: 61 LAEQKDVLSTILKTGKLPSPQVVGAESEEE 90 +AEQKD LS +LK Q +++ Sbjct: 61 MAEQKDALSGLLKGASPAVAQSKSVTAKKP 90 >UniRef50_Q1ZI99 Putative uncharacterized protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZI99_9GAMM Length = 123 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 39/86 (45%), Positives = 57/86 (66%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 +AV +KY+V R+G EKM+F+SKKEADAYDKMLD+AD L +L S V +++ Q E L L+ Sbjct: 38 VAVIIKYIVERKGVEKMTFSSKKEADAYDKMLDSADQLAAFLAQSSVTLDEVQLEELGLY 97 Query: 61 LAEQKDVLSTILKTGKLPSPQVVGAE 86 LA K+V+ ++ K + + Sbjct: 98 LASNKEVVQSLFKGNDYETQDKEPQD 123 >UniRef50_C8Q1I1 YebG family protein n=2 Tax=Enterobacteriaceae RepID=C8Q1I1_9ENTR Length = 115 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 50/93 (53%), Positives = 63/93 (67%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAVE KYVV+R+GEEKM+F +KK+ADA+DKMLD AD WL + +M++ Q EAL L Sbjct: 1 MAVETKYVVVRKGEEKMTFANKKDADAWDKMLDMADAFTDWLLQNNPEMDEGQAEALGLQ 60 Query: 61 LAEQKDVLSTILKTGKLPSPQVVGAESEEEDAS 93 LAEQKD + IL+T KLP P + E A Sbjct: 61 LAEQKDAVQHILRTSKLPEPVNAEETAPGETAK 93 >UniRef50_A0KKJ9 DNA damage-inducible gene in SOS regulon, dependent on cyclic AMP and H-NS n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KKJ9_AERHH Length = 104 Score = 101 bits (251), Expect = 9e-21, Method: Composition-based stats. Identities = 46/95 (48%), Positives = 66/95 (69%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAVE+KYVV+R G EKM+F SKKEADAYDK+LDTAD L L +PV++E +Q+E+L+ + Sbjct: 1 MAVEIKYVVVRGGVEKMTFASKKEADAYDKLLDTADELMHLLAGAPVRLEPDQQESLAFY 60 Query: 61 LAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHA 95 LAEQ+D+L +L+ K + E+ ++ Sbjct: 61 LAEQRDLLQNVLRGAKGQGSGKSEQQEEQSESDKP 95 >UniRef50_B0TIZ1 YebG family protein n=3 Tax=Alteromonadales RepID=B0TIZ1_SHEHH Length = 96 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 44/93 (47%), Positives = 61/93 (65%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAV ++VV+REG EKM+FTSKKEADAYDKMLD AD L +L+ S + +E+ E L+ + Sbjct: 1 MAVVTQFVVVREGVEKMTFTSKKEADAYDKMLDIADNLIPFLSKSDLGLEEVNIEKLAFF 60 Query: 61 LAEQKDVLSTILKTGKLPSPQVVGAESEEEDAS 93 LAE K+ L +LK G L V +++ + Sbjct: 61 LAENKEDLQVLLKGGSLEKKVAVKKTAKKSEEK 93 >UniRef50_C0QJ80 Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJ80_DESAH Length = 107 Score = 95.5 bits (236), Expect = 5e-19, Method: Composition-based stats. Identities = 36/88 (40%), Positives = 58/88 (65%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAV V+Y+V+R G EKM+F +KKEADA+DKMLD AD L +L S +++ D+Q E ++L Sbjct: 1 MAVVVQYIVVRNGVEKMTFATKKEADAHDKMLDIADNLSAFLKASKIKLSDDQNEEIALL 60 Query: 61 LAEQKDVLSTILKTGKLPSPQVVGAESE 88 LA+++D ++ +L+ + + Sbjct: 61 LAQERDTVTALLRGVAPSTASAKKKATP 88 >UniRef50_Q21MZ3 YebG n=2 Tax=Gammaproteobacteria RepID=Q21MZ3_SACD2 Length = 97 Score = 91.6 bits (226), Expect = 6e-18, Method: Composition-based stats. Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 3/94 (3%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAV + R+G F KK ADA+DKML+ A+ + + + + + E + L Sbjct: 1 MAVIAVWKCDRDGS---MFEDKKLADAHDKMLELAESITRLIEANVPGVSEADVETIGLL 57 Query: 61 LAEQKDVLSTILKTGKLPSPQVVGAESEEEDASH 94 LA++ D L K + ++E+E AS+ Sbjct: 58 LAKRSDDLIKACKGKPEVLLANLDGDAEDESASN 91 >UniRef50_Q5QU66 Uncharacterized conserved protein n=10 Tax=Gammaproteobacteria RepID=Q5QU66_IDILO Length = 104 Score = 90.5 bits (223), Expect = 1e-17, Method: Composition-based stats. Identities = 40/96 (41%), Positives = 65/96 (67%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAV +YVVIR+G EKM+FTSK EADA+DK+LD A+ L+ + +S + +++Q E ++L+ Sbjct: 1 MAVVTQYVVIRDGAEKMTFTSKAEADAHDKILDMAEALNPLIKSSELFTDEQQLEDMALF 60 Query: 61 LAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHAA 96 LA++++ + L K P+ A +E+ +AS A Sbjct: 61 LAKERENILIALGAKKPKKPKTEKASTEKVEASKPA 96 >UniRef50_A0YA49 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YA49_9GAMM Length = 96 Score = 87.8 bits (216), Expect = 9e-17, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 3/90 (3%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAV + R+G F KK+ADAYDKML+ + L + ++++ EA L Sbjct: 1 MAVVAIWKCDRDGS---MFEDKKQADAYDKMLELGEQFTALLESQIDGVDEKSAEAFGLL 57 Query: 61 LAEQKDVLSTILKTGKLPSPQVVGAESEEE 90 LA K+++ K Q++ S Sbjct: 58 LANNKELIMQACKGKTEALDQLIKPGSVTA 87 >UniRef50_A6W1L3 YebG family protein n=3 Tax=Gammaproteobacteria RepID=A6W1L3_MARMS Length = 139 Score = 87.4 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 38/72 (52%), Positives = 51/72 (70%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 M V +KYVV R+G EKM+FTSK EADAYDK+LDTA+ L L S + + Q+EALS++ Sbjct: 1 MPVIIKYVVERDGIEKMTFTSKVEADAYDKLLDTAEALYEILDQSELAGDHSQKEALSMY 60 Query: 61 LAEQKDVLSTIL 72 LA+ KD + + Sbjct: 61 LAQNKDSILDVF 72 >UniRef50_Q47W74 Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47W74_COLP3 Length = 122 Score = 87.0 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 1/92 (1%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAVE ++VVIR G E +F KK AD YDKMLD AD L + S V++ D E LS++ Sbjct: 1 MAVESRFVVIRNGVEAKTFMDKKSADEYDKMLDMADNLSQMFSQSSVELSDNANEELSIF 60 Query: 61 LAEQKDVLSTILKTGKLPSPQVVGAESEEEDA 92 LA+ ++ + L K P+ ++ E+ Sbjct: 61 LAQHREEVLVAL-LAKKPTKAIIKKSVEKVTD 91 >UniRef50_B4S014 YebG family protein n=4 Tax=Alteromonadales RepID=B4S014_ALTMD Length = 95 Score = 86.6 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 33/79 (41%), Positives = 48/79 (60%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MA+ +YVV +G EK+ T KKEAD YDKMLD AD L ++ ++++D E L++ Sbjct: 1 MAITTQYVVTHKGVEKLVTTDKKEADQYDKMLDAADNLADYIQAKGIKLDDSTVEELTIM 60 Query: 61 LAEQKDVLSTILKTGKLPS 79 L++ KD +S I K S Sbjct: 61 LSKNKDKISKIFKGATAES 79 >UniRef50_Q2SBZ6 Uncharacterized protein conserved in bacteria n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SBZ6_HAHCH Length = 112 Score = 83.1 bits (204), Expect = 2e-15, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 9/104 (8%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAV Y+ R+ ++M F SKKEAD +DK L+ A+ + +L + + E + + Sbjct: 1 MAVVTLYMSDRDPSQQM-FKSKKEADEHDKKLELAEGVSHFLAQRLTSLNEGLAEEIGML 59 Query: 61 LAEQKDVLSTILKTG--------KLPSPQVVGAESEEEDASHAA 96 +A K+ +T K P+P + + Sbjct: 60 VANHKEAFATAFKGKVDVLFEESPEPAPNAEEETKDNAKVKESG 103 >UniRef50_A6ARG3 YebG protein n=10 Tax=Gammaproteobacteria RepID=A6ARG3_VIBHA Length = 99 Score = 82.8 bits (203), Expect = 3e-15, Method: Composition-based stats. Identities = 46/99 (46%), Positives = 63/99 (63%), Gaps = 6/99 (6%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAV VKYVV R GEEKM+FTSK EADAYDKMLD AD L + L S + ++ ++E L+++ Sbjct: 1 MAVIVKYVVERNGEEKMTFTSKAEADAYDKMLDMADELFSLLGKSELLEDEGKQEDLAMY 60 Query: 61 LAEQKDVLSTILK------TGKLPSPQVVGAESEEEDAS 93 LA+ K+ + L K + V +SE+EDA+ Sbjct: 61 LAQNKEEVLYALGAKRKPAPKKAKKLEAVEEDSEQEDAA 99 >UniRef50_Q48ML8 YebG family protein n=14 Tax=Pseudomonas RepID=Q48ML8_PSE14 Length = 88 Score = 80.1 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 2/89 (2%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAVE Y R+ E +F +K ADA+D+ML+ A+LL L + + ++ E S++ Sbjct: 1 MAVETLYRSTRDLET--TFVDRKLADAHDQMLELAELLTDVLIKNVPGISEKHAEDASIY 58 Query: 61 LAEQKDVLSTILKTGKLPSPQVVGAESEE 89 +A+ + V + K ++ E Sbjct: 59 MAKNRAVFAAAFKNNATALSELSEPAESE 87 >UniRef50_A1SWU6 YebG family protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SWU6_PSYIN Length = 71 Score = 79.3 bits (194), Expect = 3e-14, Method: Composition-based stats. Identities = 30/69 (43%), Positives = 44/69 (63%) Query: 17 MSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLWLAEQKDVLSTILKTGK 76 M+FTSKKEADAYDKMLD+AD L ++ S + ++D+Q E L L+LA K+ + ++ K Sbjct: 1 MTFTSKKEADAYDKMLDSADQLAEFIGASTITLDDQQLEELGLYLASNKEAVMSLFKGNS 60 Query: 77 LPSPQVVGA 85 + V Sbjct: 61 FTPEEKVKK 69 >UniRef50_A0Z9D7 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z9D7_9GAMM Length = 84 Score = 75.8 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 1/77 (1%) Query: 18 SFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLWLAEQKDVLSTILKTGKL 77 F SKK+ADA+DKML+ AD T + ++ E + L L+ K VL K Sbjct: 1 MFDSKKDADAHDKMLELADGFRTLFETQVEGISEQDAENIGLLLSMNKHVLIAACKGNP- 59 Query: 78 PSPQVVGAESEEEDASH 94 +G ++EEE AS+ Sbjct: 60 DLLGGIGQDNEEETASN 76 >UniRef50_C5SC54 YebG family protein n=3 Tax=Allochromatium vinosum DSM 180 RepID=C5SC54_CHRVI Length = 108 Score = 73.1 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%) Query: 3 VEVKYVV-IREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPV--QMEDEQREALSL 59 +E++Y+V R G E++ KK A+AYD++L+ A+ L WL V + D++ E L++ Sbjct: 2 IEIEYIVRDRRGVERLRTADKKAAEAYDRILENAERLADWLRAGSVLPSLPDDELETLTV 61 Query: 60 WLAEQKDVLSTILKTGKLPS 79 LA + ILK L S Sbjct: 62 HLARHAREVELILKGKPLES 81 >UniRef50_C5BMU4 YebG n=2 Tax=Gammaproteobacteria RepID=C5BMU4_TERTT Length = 85 Score = 72.7 bits (177), Expect = 3e-12, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%) Query: 18 SFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLWLAEQKDVLSTILKTGKL 77 F KK A+A+D ML+ A + + + + DE EA+ L LA+ D L+ K Sbjct: 1 MFDDKKAAEAHDNMLELAANITQLIESRISGISDENLEAIGLLLAKNSDALAKACKGKPS 60 Query: 78 PSPQVVGAESEEEDASHA 95 ++ A++E + S + Sbjct: 61 VLLELEEADTETTEDSSS 78 >UniRef50_B2U493 YebG protein n=1 Tax=Shigella boydii CDC 3083-94 RepID=B2U493_SHIB3 Length = 60 Score = 69.7 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 53/82 (64%), Positives = 54/82 (65%), Gaps = 26/82 (31%) Query: 1 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW 60 MAVEVKYVVIREGEEKMSFTSKKEA+ QREALSLW Sbjct: 1 MAVEVKYVVIREGEEKMSFTSKKEAE--------------------------QREALSLW 34 Query: 61 LAEQKDVLSTILKTGKLPSPQV 82 LAEQKDVLSTILKTGKLPSP Sbjct: 35 LAEQKDVLSTILKTGKLPSPPT 56 >UniRef50_A4CD30 Putative DNA damage-inducible gene in SOS regulon, dependent on cyclic AMP and H-NS n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CD30_9GAMM Length = 90 Score = 67.0 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 28/58 (48%), Positives = 41/58 (70%) Query: 17 MSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLWLAEQKDVLSTILKT 74 M+FTSKK+ADAYDKMLD A+ L+ L+ V + ++Q E+L+L +A+ KD + LK Sbjct: 1 MTFTSKKDADAYDKMLDIAESLEAILSTINVPLSEQQVESLALEMAKDKDNIINALKG 58 >UniRef50_A1U4W6 Putative uncharacterized protein n=3 Tax=Marinobacter RepID=A1U4W6_MARAV Length = 92 Score = 66.6 bits (161), Expect = 3e-10, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 8/93 (8%) Query: 1 MAVEVKYVVIREGEE-------KMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQ 53 M V+ Y R+G + KM F+SK EADA DK+L+ ++ + T+L + +E Sbjct: 1 MGVKALYYSERDGLDMALKNPDKMLFSSKAEADARDKVLELSEEITTFLQRKVGGLSEEL 60 Query: 54 REALSLWLAEQKDVLSTILKTGKLPSPQVVGAE 86 E +L +AE+KD+ + +K + V AE Sbjct: 61 AEQCALAIAEEKDLFTKAMK-KPELLNETVEAE 92 >UniRef50_Q4KI27 Putative uncharacterized protein n=7 Tax=Pseudomonas RepID=Q4KI27_PSEF5 Length = 96 Score = 64.7 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 39/73 (53%) Query: 20 TSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLWLAEQKDVLSTILKTGKLPS 79 K EAD +DKML+ A+LL L + + ++Q E +++A+ +DV + K+ Sbjct: 1 MDKAEADRHDKMLELAELLAEVLHKAVPSLSEQQVEEAGIYMAKNRDVFAKAFKSQPDAL 60 Query: 80 PQVVGAESEEEDA 92 +++ A + +A Sbjct: 61 SELLSAPAPVVEA 73 >UniRef50_UPI000190AA52 DNA damage-inducible protein YebG n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. 404ty RepID=UPI000190AA52 Length = 61 Score = 54.3 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 32/46 (69%), Positives = 35/46 (76%), Gaps = 2/46 (4%) Query: 51 DEQREALSLWLAEQKDVLSTILKTGKLPSPQVVG--AESEEEDASH 94 D QREALSLW+AE K+VLSTILKTGKLPSPQ V S+ E AS Sbjct: 1 DGQREALSLWMAEHKEVLSTILKTGKLPSPQAVEKAPRSKNEKASR 46 >UniRef50_A4SMH6 Putative uncharacterized protein n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SMH6_AERS4 Length = 68 Score = 49.2 bits (116), Expect = 4e-05, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 31/54 (57%) Query: 39 DTWLTNSPVQMEDEQREALSLWLAEQKDVLSTILKTGKLPSPQVVGAESEEEDA 92 T L +PV +E EQ+E L+ +LAEQ+DVL +L+ GK + EE A Sbjct: 1 MTLLAGAPVNLEPEQQETLAFYLAEQRDVLQNVLRGGKAQGSTKEDPQPMEEKA 54 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.306 0.138 0.358 Lambda K H 0.267 0.0425 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 519,374,051 Number of Sequences: 3077464 Number of extensions: 17827559 Number of successful extensions: 45773 Number of sequences better than 1.0e-01: 32 Number of HSP's better than 0.1 without gapping: 90 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 45673 Number of HSP's gapped (non-prelim): 95 length of query: 96 length of database: 1,040,396,356 effective HSP length: 65 effective length of query: 31 effective length of database: 840,361,196 effective search space: 26051197076 effective search space used: 26051197076 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.4 bits) S2: 87 (38.1 bits)