08/01/2012 16:30:27 : INFO  : Run start: Sun Jan  8 16:30:25 GMT 2012
08/01/2012 16:30:33 : INFO  : Initialised job
08/01/2012 16:30:35 : INFO  : Renaming log file 'phyre2_20120108_163024.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/4c402f75401fc649/phyre_20120108_163024.log'
08/01/2012 16:30:37 : INFO  : Initialised job:
Sequence
>batch____
MKRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARAHKV
LDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAYQVKAEAVI
TGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALADYYGKLDL
VRNETLTCYNGFKGDGCGHCAACNLRANGLNHYLADKPTVMAAMKQKTGLR

08/01/2012 16:30:38 : INFO  : Checked sequence
08/01/2012 16:30:41 : INFO  : Finding homologues with PSI-BLAST
08/01/2012 16:30:42 : INFO  : PSI-BLAST 3 iterations
08/01/2012 16:32:08 : INFO  : PSI-BLAST 5 iterations
08/01/2012 16:34:07 : INFO  : Finished PSI-BLAST
08/01/2012 16:34:10 : INFO  : Running Buildali to generate a3m file
08/01/2012 16:41:40 : INFO  : Converting to HMM
08/01/2012 16:41:44 : INFO  : Calibrating HMM
08/01/2012 16:41:56 : INFO  : Searching HMM database
08/01/2012 16:46:13 : INFO  : Finished buildali
08/01/2012 16:46:15 : INFO  : Predicting secondary structure
08/01/2012 16:46:25 : INFO  : Predicted secondary structure (PSI-Pred)
08/01/2012 16:46:28 : INFO  : Predicting Disordered regions
08/01/2012 16:46:34 : INFO  : Predicted Disorder (Disopred)
08/01/2012 16:46:36 : INFO  : Running memsat_svm check
08/01/2012 16:49:20 : INFO  : Globular protein
08/01/2012 16:49:21 : INFO  : Predicted Transmembrane (memsat_svm) ID '4c402f75401fc649'
08/01/2012 16:49:24 : INFO  : Initialising fold library search
08/01/2012 16:49:29 : INFO  : Initialised search input
08/01/2012 16:49:32 : INFO  : Building Ensemble models
08/01/2012 16:49:37 : INFO  : Building hh.d2pg3a1.model.1.pdb
08/01/2012 16:49:57 : INFO  : Building d2pg3a1.1.pdb
08/01/2012 16:50:16 : INFO  : Building c3bl5E_.2.pdb
08/01/2012 16:50:35 : INFO  : Building c2c5sA_.3.pdb
08/01/2012 16:50:55 : INFO  : Building d2c5sa1.4.pdb
08/01/2012 16:51:15 : INFO  : Building c2hmaA_.5.pdb
08/01/2012 16:51:35 : INFO  : Building c2derA_.6.pdb
08/01/2012 16:51:55 : INFO  : Building d1gpma1.7.pdb
08/01/2012 16:52:15 : INFO  : Building c2vxoB_.8.pdb
08/01/2012 16:52:36 : INFO  : Building d1k92a1.9.pdb
08/01/2012 16:52:55 : INFO  : Building c2dplA_.10.pdb
08/01/2012 16:53:14 : INFO  : Building d1j20a1.11.pdb
08/01/2012 16:53:34 : INFO  : Building c2ywcC_.12.pdb
08/01/2012 16:53:55 : INFO  : Building d1vl2a1.13.pdb
08/01/2012 16:54:13 : INFO  : Building c2nz2A_.14.pdb
08/01/2012 16:54:32 : INFO  : Building c3tqiB_.15.pdb
08/01/2012 16:54:51 : INFO  : Building c3k32D_.16.pdb
08/01/2012 16:55:10 : INFO  : Building c1vl2C_.17.pdb
08/01/2012 16:55:29 : INFO  : Building c1gpmD_.18.pdb
08/01/2012 16:55:48 : INFO  : Building c1k97A_.19.pdb
08/01/2012 16:56:07 : INFO  : Building c1kh2D_.20.pdb
08/01/2012 16:56:51 : INFO  : Finished HH model building
08/01/2012 16:56:53 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
08/01/2012 16:57:54 : INFO  : html domain output complete ID '4c402f75401fc649'
08/01/2012 17:38:07 : INFO  : Run end  : Sun Jan  8 17:38:05 GMT 2012
