Phyre 2 alignment of P29744 with c3rl0Y_

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Job Description | P29744
Confidence | 1.94% | Date | Thu Jan 5 11:45:40 GMT 2012
Rank | 68 | Aligned Residues | 27
% Identity | 7% | Template | c3rl0Y_
PDB info | PDB header:membrane protein/exocytosis | Chain: Y: PDB Molecule:vesicle-associated membrane protein 2; | PDBTitle: truncated snare complex with complexin (p1)
Resolution | 3.80 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 69 | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | .
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Query Sequence |  | A | T | Q | K | V | S | L | E | E | S | V | L | S | Q | V | T | T | A | I | Q | N | A | Q | E | K | I | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | N | R | R | L | Q | Q | T | Q | A | Q | V | D | E | V | V | D | I | M | R | V | N | V | D | K | V | L
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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