Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	R	F	Y	R	P	L	G	R	I	S	A	L	T	F	D	L	D	D	T	L	Y	D	N	R	P	V	I	L	R	T	E	R	E	A	L	T	F	V	Q	N	Y	H	P	A	L	R	S	F	Q	N	E	D	L	Q	R	L	R	Q	A
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		V	R	E	A	E	P	E	I	Y	H	D	V	T	R	W	R	F	R	S	I	E	Q	A	M	L	D	A	G	L	S	A	E	E	A	S	A	G	A	H	A	A	M	I	N	F	A	K	W	R	S	R	I	D	V	P	Q	Q	T	H	D
Secondary structure
SS confidence
Disorder							?			?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		T	L	K	Q	L	A	K	K	W	P	L	V	A	I	T	N	G	N	A	Q	P	E	L	F	G	L	G	D	Y	F	E	F	V	L	R	A	G	P	H	G	R	S	K	P	F	S	D	M	Y	F	L	A	A	E	K	L	N	V	P	I
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Sequence		G	E	I	L	H	V	G	D	D	L	T	T	D	V	G	G	A	I	R	S	G	M	Q	A	C	W	I	R	P	E	N	G	D	L	M	Q	T	W	D	S	R	L	L	P	H	L	E	I	S	R	L	A	S	L	T	S	L	I
Secondary structure
SS confidence
Disorder																																	?	?	?	?	?	?	?																		?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 3qnm chain A Region: 1 - 238 Aligned: 224 Modelled: 237 Confidence: 99.9% Identity: 18% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:haloacid dehalogenase-like hydrolase; PDBTitle: haloalkane dehalogenase family member from bacteroides2 thetaiotaomicron of unknown function Phyre2 PDB 2gfh chain A domain 1 Region: 6 - 238 Aligned: 227 Modelled: 233 Confidence: 99.9% Identity: 23% Fold: HAD-like Superfamily: HAD-like Family: beta-Phosphoglucomutase-like Phyre2 PDB 2hsz chain A domain 1 Region: 7 - 238 Aligned: 217 Modelled: 219 Confidence: 99.9% Identity: 15% Fold: HAD-like Superfamily: HAD-like Family: beta-Phosphoglucomutase-like Phyre2 PDB 1x42 chain A domain 1 Region: 9 - 238 Aligned: 221 Modelled: 229 Confidence: 99.9% Identity: 18% Fold: HAD-like Superfamily: HAD-like Family: HAD-related Phyre2 PDB 3ed5 chain A Region: 7 - 238 Aligned: 221 Modelled: 231 Confidence: 99.9% Identity: 21% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:yfnb; PDBTitle: the crystal structure of yfnb from bacillus subtilis subsp. subtilis2 str. 168 Phyre2 PDB 2om6 chain A Region: 8 - 238 Aligned: 219 Modelled: 231 Confidence: 99.9% Identity: 18% PDB header:hydrolase Chain: A: PDB Molecule:probable phosphoserine phosphatase; PDBTitle: hypothetical protein (probable phosphoserine phosph (ph0253) from2 pyrococcus horikoshii ot3 Phyre2 PDB 3k1z chain A Region: 11 - 238 Aligned: 227 Modelled: 228 Confidence: 99.9% Identity: 17% PDB header:hydrolase Chain: A: PDB Molecule:haloacid dehalogenase-like hydrolase domain-containing PDBTitle: crystal structure of human haloacid dehalogenase-like hydrolase domain2 containing 3 (hdhd3) Phyre2 PDB 3iru chain A Region: 7 - 238 Aligned: 225 Modelled: 225 Confidence: 99.9% Identity: 17% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:phoshonoacetaldehyde hydrolase like protein; PDBTitle: crystal structure of phoshonoacetaldehyde hydrolase like protein from2 oleispira antarctica Phyre2 PDB 3ddh chain A Region: 10 - 238 Aligned: 221 Modelled: 229 Confidence: 99.9% Identity: 19% PDB header:hydrolase Chain: A: PDB Molecule:putative haloacid dehalogenase-like family hydrolase; PDBTitle: the structure of a putative haloacid dehalogenase-like family2 hydrolase from bacteroides thetaiotaomicron vpi-5482 Phyre2 PDB 3dv9 chain A Region: 9 - 238 Aligned: 209 Modelled: 211 Confidence: 99.9% Identity: 14% PDB header:isomerase Chain: A: PDB Molecule:beta-phosphoglucomutase; PDBTitle: putative beta-phosphoglucomutase from bacteroides vulgatus. Phyre2 PDB 3nuq chain A Region: 9 - 238 Aligned: 207 Modelled: 212 Confidence: 99.9% Identity: 18% PDB header:hydrolase Chain: A: PDB Molecule:putative nucleotide phosphatase; PDBTitle: structure of a putative nucleotide phosphatase from saccharomyces2 cerevisiae Phyre2 PDB 3d6j chain A Region: 9 - 235 Aligned: 204 Modelled: 206 Confidence: 99.9% Identity: 18% PDB header:hydrolase Chain: A: PDB Molecule:putative haloacid dehalogenase-like hydrolase; PDBTitle: crystal structure of putative haloacid dehalogenase-like hydrolase2 from bacteroides fragilis Phyre2 PDB 2hoq chain A Region: 10 - 238 Aligned: 217 Modelled: 229 Confidence: 99.9% Identity: 20% PDB header:hydrolase Chain: A: PDB Molecule:putative had-hydrolase ph1655; PDBTitle: crystal structure of the probable haloacid dehalogenase (ph1655) from2 pyrococcus horikoshii ot3 Phyre2 PDB 2hi0 chain B Region: 8 - 238 Aligned: 228 Modelled: 230 Confidence: 99.9% Identity: 15% PDB header:hydrolase Chain: B: PDB Molecule:putative phosphoglycolate phosphatase; PDBTitle: crystal structure of putative phosphoglycolate phosphatase2 (yp_619066.1) from lactobacillus delbrueckii subsp. bulgaricus atcc3 baa-365 at 1.51 a resolution Phyre2 PDB 2ho4 chain A Region: 10 - 238 Aligned: 229 Modelled: 229 Confidence: 99.9% Identity: 13% PDB header:hydrolase Chain: A: PDB Molecule:haloacid dehalogenase-like hydrolase domain PDBTitle: crystal structure of protein from mouse mm.236127 Phyre2 PDB 2pke chain A Region: 5 - 236 Aligned: 223 Modelled: 232 Confidence: 99.9% Identity: 15% PDB header:hydrolase Chain: A: PDB Molecule:haloacid delahogenase-like family hydrolase; PDBTitle: crystal structure of haloacid delahogenase-like family hydrolase2 (np_639141.1) from xanthomonas campestris at 1.81 a resolution Phyre2 PDB 1swv chain A Region: 9 - 238 Aligned: 223 Modelled: 223 Confidence: 99.9% Identity: 16% Fold: HAD-like Superfamily: HAD-like Family: Phosphonoacetaldehyde hydrolase-like Phyre2 PDB 2ah5 chain A domain 1 Region: 8 - 238 Aligned: 205 Modelled: 208 Confidence: 99.9% Identity: 18% Fold: HAD-like Superfamily: HAD-like Family: beta-Phosphoglucomutase-like Phyre2 PDB 1te2 chain A Region: 8 - 235 Aligned: 206 Modelled: 210 Confidence: 99.8% Identity: 18% Fold: HAD-like Superfamily: HAD-like Family: beta-Phosphoglucomutase-like Phyre2 PDB 2fdr chain A domain 1 Region: 9 - 238 Aligned: 209 Modelled: 209 Confidence: 99.8% Identity: 15% Fold: HAD-like Superfamily: HAD-like Family: beta-Phosphoglucomutase-like Phyre2 1 c3qnmA_ 2 d2gfha1 3 d2hsza1 4 d1x42a1 5 c3ed5A_ 6 c2om6A_ 7 c3k1zA_ 8 c3iruA_ 9 c3ddhA_ 10 c3dv9A_ 11 c3nuqA_ 12 c3d6jA_ 13 c2hoqA_ 14 c2hi0B_ 15 c2ho4A_ 16 c2pkeA_ 17 d1swva_ 18 d2ah5a1 19 d1te2a_ 20 d2fdra1 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3qnmA_ 99.9 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:haloacid dehalogenase-like hydrolase; PDBTitle: haloalkane dehalogenase family member from bacteroides2 thetaiotaomicron of unknown function 2 d2gfha1 99.9 23 Fold:HAD-like Superfamily:HAD-like Family:beta-Phosphoglucomutase-like 3 d2hsza1 99.9 15 Fold:HAD-like Superfamily:HAD-like Family:beta-Phosphoglucomutase-like 4 d1x42a1 99.9 18 Fold:HAD-like Superfamily:HAD-like Family:HAD-related 5 c3ed5A_ 99.9 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:yfnb; PDBTitle: the crystal structure of yfnb from bacillus subtilis subsp. subtilis2 str. 168 6 c2om6A_ 99.9 18 PDB header:hydrolase Chain: A: PDB Molecule:probable phosphoserine phosphatase; PDBTitle: hypothetical protein (probable phosphoserine phosph (ph0253) from2 pyrococcus horikoshii ot3 7 c3k1zA_ 99.9 17 PDB header:hydrolase Chain: A: PDB Molecule:haloacid dehalogenase-like hydrolase domain-containing PDBTitle: crystal structure of human haloacid dehalogenase-like hydrolase domain2 containing 3 (hdhd3) 8 c3iruA_ 99.9 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:phoshonoacetaldehyde hydrolase like protein; PDBTitle: crystal structure of phoshonoacetaldehyde hydrolase like protein from2 oleispira antarctica 9 c3ddhA_ 99.9 19 PDB header:hydrolase Chain: A: PDB Molecule:putative haloacid dehalogenase-like family hydrolase; PDBTitle: the structure of a putative haloacid dehalogenase-like family2 hydrolase from bacteroides thetaiotaomicron vpi-5482 10 c3dv9A_ 99.9 14 PDB header:isomerase Chain: A: PDB Molecule:beta-phosphoglucomutase; PDBTitle: putative beta-phosphoglucomutase from bacteroides vulgatus. 11 c3nuqA_ 99.9 18 PDB header:hydrolase Chain: A: PDB Molecule:putative nucleotide phosphatase; PDBTitle: structure of a putative nucleotide phosphatase from saccharomyces2 cerevisiae 12 c3d6jA_ 99.9 18 PDB header:hydrolase Chain: A: PDB Molecule:putative haloacid dehalogenase-like hydrolase; PDBTitle: crystal structure of putative haloacid dehalogenase-like hydrolase2 from bacteroides fragilis 13 c2hoqA_ 99.9 20 PDB header:hydrolase Chain: A: PDB Molecule:putative had-hydrolase ph1655; PDBTitle: crystal structure of the probable haloacid dehalogenase (ph1655) from2 pyrococcus horikoshii ot3 14 c2hi0B_ 99.9 15 PDB header:hydrolase Chain: B: PDB Molecule:putative phosphoglycolate phosphatase; PDBTitle: crystal structure of putative phosphoglycolate phosphatase2 (yp_619066.1) from lactobacillus delbrueckii subsp. bulgaricus atcc3 baa-365 at 1.51 a resolution 15 c2ho4A_ 99.9 13 PDB header:hydrolase Chain: A: PDB Molecule:haloacid dehalogenase-like hydrolase domain PDBTitle: crystal structure of protein from mouse mm.236127 16 c2pkeA_ 99.9 15 PDB header:hydrolase Chain: A: PDB Molecule:haloacid delahogenase-like family hydrolase; PDBTitle: crystal structure of haloacid delahogenase-like family hydrolase2 (np_639141.1) from xanthomonas campestris at 1.81 a resolution 17 d1swva_ 99.9 16 Fold:HAD-like Superfamily:HAD-like Family:Phosphonoacetaldehyde hydrolase-like 18 d2ah5a1 99.9 18 Fold:HAD-like Superfamily:HAD-like Family:beta-Phosphoglucomutase-like 19 d1te2a_ 99.8 18 Fold:HAD-like Superfamily:HAD-like Family:beta-Phosphoglucomutase-like 20 d2fdra1 99.8 15 Fold:HAD-like Superfamily:HAD-like Family:beta-Phosphoglucomutase-like 21 c2no5B_ not modelled 99.8 19 PDB header:hydrolase Chain: B: PDB Molecule:(s)-2-haloacid dehalogenase iva; PDBTitle: crystal structure analysis of a dehalogenase with intermediate complex 22 d1zrna_ not modelled 99.8 22 Fold:HAD-like Superfamily:HAD-like Family:HAD-related 23 d1vjra_ not modelled 99.8 16 Fold:HAD-like Superfamily:HAD-like Family:NagD-like 24 c3sd7A_ not modelled 99.8 16 PDB header:hydrolase Chain: A: PDB Molecule:putative phosphatase; PDBTitle: 1.7 angstrom resolution crystal structure of putative phosphatase from2 clostridium difficile 25 c2yy6B_ not modelled 99.8 19 PDB header:hydrolase Chain: B: PDB Molecule:phosphoglycolate phosphatase; PDBTitle: crystal structure of the phosphoglycolate phosphatase from aquifex2 aeolicus vf5 26 c3qgmC_ not modelled 99.8 13 PDB header:hydrolase Chain: C: PDB Molecule:p-nitrophenyl phosphatase (pho2); PDBTitle: p-nitrophenyl phosphatase from archaeoglobus fulgidus 27 c3pdwA_ not modelled 99.8 16 PDB header:hydrolase Chain: A: PDB Molecule:uncharacterized hydrolase yutf; PDBTitle: crystal structure of putative p-nitrophenyl phosphatase from bacillus2 subtilis 28 d2hdoa1 not modelled 99.8 20 Fold:HAD-like Superfamily:HAD-like Family:beta-Phosphoglucomutase-like 29 c3e58A_ not modelled 99.8 15 PDB header:isomerase Chain: A: PDB Molecule:putative beta-phosphoglucomutase; PDBTitle: crystal structure of putative beta-phosphoglucomutase from2 streptococcus thermophilus 30 d1qq5a_ not modelled 99.8 24 Fold:HAD-like Superfamily:HAD-like Family:HAD-related 31 c3mc1A_ not modelled 99.8 20 PDB header:hydrolase Chain: A: PDB Molecule:predicted phosphatase, had family; PDBTitle: crystal structure of a predicted phosphatase from2 clostridium acetobutylicum 32 d2c4na1 not modelled 99.8 14 Fold:HAD-like Superfamily:HAD-like Family:NagD-like 33 c3s6jC_ not modelled 99.8 18 PDB header:hydrolase Chain: C: PDB Molecule:hydrolase, haloacid dehalogenase-like family; PDBTitle: the crystal structure of a hydrolase from pseudomonas syringae 34 d2go7a1 not modelled 99.8 19 Fold:HAD-like Superfamily:HAD-like Family:beta-Phosphoglucomutase-like 35 d1ys9a1 not modelled 99.8 17 Fold:HAD-like Superfamily:HAD-like Family:NagD-like 36 c3m9lA_ not modelled 99.8 19 PDB header:hydrolase Chain: A: PDB Molecule:hydrolase, haloacid dehalogenase-like family; PDBTitle: crystal structure of probable had family hydrolase from2 pseudomonas fluorescens pf-5 37 d1zs9a1 not modelled 99.8 12 Fold:HAD-like Superfamily:HAD-like Family:Enolase-phosphatase E1 38 c2w11B_ not modelled 99.8 18 PDB header:hydrolase Chain: B: PDB Molecule:2-haloalkanoic acid dehalogenase; PDBTitle: structure of the l-2-haloacid dehalogenase from sulfolobus2 tokodaii 39 c3l5kA_ not modelled 99.8 15 PDB header:hydrolase Chain: A: PDB Molecule:haloacid dehalogenase-like hydrolase domain- PDBTitle: the crystal structure of human haloacid dehalogenase-like2 hydrolase domain containing 1a (hdhd1a) 40 c2pibA_ not modelled 99.8 14 PDB header:hydrolase Chain: A: PDB Molecule:phosphorylated carbohydrates phosphatase tm_1254; PDBTitle: crystal structure of putative beta-phosphoglucomutase from2 thermotoga maritima 41 c1zjjA_ not modelled 99.8 17 PDB header:hydrolase Chain: A: PDB Molecule:hypothetical protein ph1952; PDBTitle: crystal structure of hypothetical protein ph1952 from pyrococcus2 horikoshii ot3 42 c2g80C_ not modelled 99.8 9 PDB header:hydrolase Chain: C: PDB Molecule:protein utr4; PDBTitle: crystal structure of utr4 protein (unknown transcript 4 protein)2 (yel038w) from saccharomyces cerevisiae at 2.28 a resolution 43 d1wvia_ not modelled 99.8 15 Fold:HAD-like Superfamily:HAD-like Family:NagD-like 44 d1yv9a1 not modelled 99.8 13 Fold:HAD-like Superfamily:HAD-like Family:NagD-like 45 d2g80a1 not modelled 99.8 9 Fold:HAD-like Superfamily:HAD-like Family:Enolase-phosphatase E1 46 d2hcfa1 not modelled 99.8 16 Fold:HAD-like Superfamily:HAD-like Family:beta-Phosphoglucomutase-like 47 c2cftA_ not modelled 99.8 17 PDB header:phosphatase Chain: A: PDB Molecule:pyridoxal phosphate phosphatase; PDBTitle: crystal structure of human pyridoxal 5'-phosphate2 phosphatase with its substrate 48 d1o08a_ not modelled 99.8 16 Fold:HAD-like Superfamily:HAD-like Family:beta-Phosphoglucomutase-like 49 d1ydfa1 not modelled 99.8 18 Fold:HAD-like Superfamily:HAD-like Family:NagD-like 50 c2qltA_ not modelled 99.7 14 PDB header:hydrolase Chain: A: PDB Molecule:(dl)-glycerol-3-phosphatase 1; PDBTitle: crystal structure of an isoform of dl-glycerol-3-phosphatase, rhr2p,2 from saccharomyces cerevisiae 51 c2x4dB_ not modelled 99.7 18 PDB header:hydrolase Chain: B: PDB Molecule:phospholysine phosphohistidine inorganic pyrophosphate PDBTitle: crystal structure of human phospholysine phosphohistidine2 inorganic pyrophosphate phosphatase lhpp 52 c3nasA_ not modelled 99.7 12 PDB header:isomerase Chain: A: PDB Molecule:beta-phosphoglucomutase; PDBTitle: the crystal structure of beta-phosphoglucomutase from bacillus2 subtilis 53 d2gmwa1 not modelled 99.7 18 Fold:HAD-like Superfamily:HAD-like Family:Histidinol phosphatase-like 54 c3l8hC_ not modelled 99.7 17 PDB header:hydrolase Chain: C: PDB Molecule:putative haloacid dehalogenase-like hydrolase; PDBTitle: crystal structure of d,d-heptose 1.7-bisphosphate phosphatase from b.2 bronchiseptica complexed with magnesium and phosphate 55 c3esqA_ not modelled 99.7 18 PDB header:hydrolase Chain: A: PDB Molecule:d,d-heptose 1,7-bisphosphate phosphatase; PDBTitle: crystal structure of calcium-bound d,d-heptose 1.7-2 bisphosphate phosphatase from e. coli 56 c2p11A_ not modelled 99.7 18 PDB header:hydrolase Chain: A: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a putative haloacid dehalogenase-like hydrolase2 (bxe_b1342) from burkholderia xenovorans lb400 at 2.20 a resolution 57 c3kzxA_ not modelled 99.7 17 PDB header:hydrolase Chain: A: PDB Molecule:had-superfamily hydrolase, subfamily ia, variant 1; PDBTitle: crystal structure of a had-superfamily hydrolase from ehrlichia2 chaffeensis at 1.9a resolution 58 c3cnhA_ not modelled 99.7 15 PDB header:hydrolase Chain: A: PDB Molecule:hydrolase family protein; PDBTitle: crystal structure of predicted hydrolase of haloacid dehalogenase-like2 superfamily (np_295428.1) from deinococcus radiodurans at 1.66 a3 resolution 59 c2hx1D_ not modelled 99.6 16 PDB header:hydrolase Chain: D: PDB Molecule:predicted sugar phosphatases of the had PDBTitle: crystal structure of possible sugar phosphatase, had2 superfamily (zp_00311070.1) from cytophaga hutchinsonii3 atcc 33406 at 2.10 a resolution 60 d2fi1a1 not modelled 99.6 18 Fold:HAD-like Superfamily:HAD-like Family:Phosphonoacetaldehyde hydrolase-like 61 d2o2xa1 not modelled 99.6 17 Fold:HAD-like Superfamily:HAD-like Family:Histidinol phosphatase-like 62 c2zg6A_ not modelled 99.6 16 PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein st2620; PDBTitle: crystal structure of hypothetical protein; probable 2-2 haloalkanoic acid dehalogenase from sulfolobus tokodaii 63 d1zd3a1 not modelled 99.6 15 Fold:HAD-like Superfamily:HAD-like Family:YihX-like 64 c2i6xA_ not modelled 99.6 16 PDB header:hydrolase Chain: A: PDB Molecule:hydrolase, haloacid dehalogenase-like family; PDBTitle: the structure of a predicted had-like family hydrolase from2 porphyromonas gingivalis. 65 c3kd3A_ not modelled 99.6 13 PDB header:unknown function Chain: A: PDB Molecule:phosphoserine phosphohydrolase-like protein; PDBTitle: crystal structure of a phosphoserine phosphohydrolase-like protein2 from francisella tularensis subsp. tularensis schu s4 66 d1qyia_ not modelled 99.6 17 Fold:HAD-like Superfamily:HAD-like Family:Hypothetical protein MW1667 (SA1546) 67 d2b0ca1 not modelled 99.5 13 Fold:HAD-like Superfamily:HAD-like Family:YihX-like 68 c3ib6B_ not modelled 99.4 23 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of an uncharacterized protein from listeria2 monocytogenes serotype 4b 69 c2odaB_ not modelled 99.4 20 PDB header:protein binding Chain: B: PDB Molecule:hypothetical protein pspto_2114; PDBTitle: crystal structure of pspto_2114 70 c1cr6A_ not modelled 99.4 19 PDB header:hydrolase Chain: A: PDB Molecule:epoxide hydrolase; PDBTitle: crystal structure of murine soluble epoxide hydrolase2 complexed with cpu inhibitor 71 d1u7pa_ not modelled 99.4 18 Fold:HAD-like Superfamily:HAD-like Family:Magnesium-dependent phosphatase-1, Mdp1 72 d1cr6a1 not modelled 99.4 20 Fold:HAD-like Superfamily:HAD-like Family:YihX-like 73 d1nnla_ not modelled 99.3 15 Fold:HAD-like Superfamily:HAD-like Family:Phosphoserine phosphatase 74 c3m1yA_ not modelled 99.3 16 PDB header:hydrolase Chain: A: PDB Molecule:phosphoserine phosphatase (serb); PDBTitle: crystal structure of a phosphoserine phosphatase (serb) from2 helicobacter pylori 75 d2fpwa1 not modelled 99.2 20 Fold:HAD-like Superfamily:HAD-like Family:Histidinol phosphatase-like 76 d1j97a_ not modelled 99.1 12 Fold:HAD-like Superfamily:HAD-like Family:Phosphoserine phosphatase 77 d2feaa1 not modelled 99.0 18 Fold:HAD-like Superfamily:HAD-like Family:MtnX-like 78 d1rkua_ not modelled 99.0 9 Fold:HAD-like Superfamily:HAD-like Family:Homoserine kinase ThrH 79 c3kc2A_ not modelled 99.0 22 PDB header:hydrolase Chain: A: PDB Molecule:uncharacterized protein ykr070w; PDBTitle: crystal structure of mitochondrial had-like phosphatase from2 saccharomyces cerevisiae 80 d1wr8a_ not modelled 98.6 12 Fold:HAD-like Superfamily:HAD-like Family:Predicted hydrolases Cof 81 c2pr7A_ not modelled 98.6 21 PDB header:hydrolase Chain: A: PDB Molecule:haloacid dehalogenase/epoxide hydrolase family; PDBTitle: crystal structure of uncharacterized protein (np_599989.1) from2 corynebacterium glutamicum atcc 13032 kitasato at 1.44 a resolution 82 d1l6ra_ not modelled 98.6 10 Fold:HAD-like Superfamily:HAD-like Family:Predicted hydrolases Cof 83 d1q92a_ not modelled 98.5 16 Fold:HAD-like Superfamily:HAD-like Family:5'(3')-deoxyribonucleotidase (dNT-2) 84 d1k1ea_ not modelled 98.4 18 Fold:HAD-like Superfamily:HAD-like Family:Probable phosphatase YrbI 85 c3fvvA_ not modelled 98.4 10 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: the crystal structure of the protein with unknown function from2 bordetella pertussis tohama i 86 c2i7dB_ not modelled 98.3 15 PDB header:hydrolase Chain: B: PDB Molecule:5'(3')-deoxyribonucleotidase, cytosolic type; PDBTitle: structure of human cytosolic deoxyribonucleotidase in2 complex with deoxyuridine, alf4 and mg2+ 87 c3e8mD_ not modelled 98.3 15 PDB header:transferase Chain: D: PDB Molecule:acylneuraminate cytidylyltransferase; PDBTitle: structure-function analysis of 2-keto-3-deoxy-d-glycero-d-galacto-2 nononate-9-phosphate (kdn) phosphatase defines a new clad within the3 type c0 had subfamily 88 c3mn1B_ not modelled 98.3 17 PDB header:hydrolase Chain: B: PDB Molecule:probable yrbi family phosphatase; PDBTitle: crystal structure of probable yrbi family phosphatase from pseudomonas2 syringae pv.phaseolica 1448a 89 c2r8zC_ not modelled 98.2 21 PDB header:hydrolase Chain: C: PDB Molecule:3-deoxy-d-manno-octulosonate 8-phosphate phosphatase; PDBTitle: crystal structure of yrbi phosphatase from escherichia coli in complex2 with a phosphate and a calcium ion 90 c3n07B_ not modelled 98.2 19 PDB header:hydrolase Chain: B: PDB Molecule:3-deoxy-d-manno-octulosonate 8-phosphate phosphatase; PDBTitle: structure of putative 3-deoxy-d-manno-octulosonate 8-phosphate2 phosphatase from vibrio cholerae 91 c2qyhD_ not modelled 98.2 11 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:hypothetical conserved protein, gk1056; PDBTitle: crystal structure of the hypothetical protein (gk1056) from2 geobacillus kaustophilus hta426 92 c3p96A_ not modelled 98.1 16 PDB header:hydrolase Chain: A: PDB Molecule:phosphoserine phosphatase serb; PDBTitle: crystal structure of phosphoserine phosphatase serb from mycobacterium2 avium, native form 93 c3n1uA_ not modelled 98.1 20 PDB header:hydrolase Chain: A: PDB Molecule:hydrolase, had superfamily, subfamily iii a; PDBTitle: structure of putative had superfamily (subfamily iii a) hydrolase from2 legionella pneumophila 94 c3ewiB_ not modelled 98.1 13 PDB header:transferase Chain: B: PDB Molecule:n-acylneuraminate cytidylyltransferase; PDBTitle: structural analysis of the c-terminal domain of murine cmp-2 sialic acid synthetase 95 c2p9jH_ not modelled 98.1 21 PDB header:structural genomics, unknown function Chain: H: PDB Molecule:hypothetical protein aq2171; PDBTitle: crystal structure of aq2171 from aquifex aeolicus 96 c3n28A_ not modelled 97.9 12 PDB header:hydrolase Chain: A: PDB Molecule:phosphoserine phosphatase; PDBTitle: crystal structure of probable phosphoserine phosphatase from vibrio2 cholerae, unliganded form 97 c3fzqA_ not modelled 97.8 12 PDB header:hydrolase Chain: A: PDB Molecule:putative hydrolase; PDBTitle: crystal structure of putative haloacid dehalogenase-like hydrolase2 (yp_001086940.1) from clostridium difficile 630 at 2.10 a resolution 98 d1nrwa_ not modelled 97.8 15 Fold:HAD-like Superfamily:HAD-like Family:Predicted hydrolases Cof 99 d1wzca1 not modelled 97.8 13 Fold:HAD-like Superfamily:HAD-like Family:Predicted hydrolases Cof 100 c3niwA_ not modelled 97.7 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:haloacid dehalogenase-like hydrolase; PDBTitle: crystal structure of a haloacid dehalogenase-like hydrolase from2 bacteroides thetaiotaomicron 101 c3mmzA_ not modelled 97.7 18 PDB header:hydrolase Chain: A: PDB Molecule:putative had family hydrolase; PDBTitle: crystal structure of putative had family hydrolase from streptomyces2 avermitilis ma-4680 102 c3r4cA_ not modelled 97.6 14 PDB header:hydrolase Chain: A: PDB Molecule:hydrolase, haloacid dehalogenase-like hydrolase; PDBTitle: divergence of structure and function among phosphatases of the2 haloalkanoate (had) enzyme superfamily: analysis of bt1666 from3 bacteroides thetaiotaomicron 103 d1nf2a_ not modelled 97.6 14 Fold:HAD-like Superfamily:HAD-like Family:Predicted hydrolases Cof 104 d1ltqa1 not modelled 97.5 23 Fold:HAD-like Superfamily:HAD-like Family:phosphatase domain of polynucleotide kinase 105 c3daoB_ not modelled 97.5 9 PDB header:hydrolase Chain: B: PDB Molecule:putative phosphatse; PDBTitle: crystal structure of a putative phosphatse (eubrec_1417) from2 eubacterium rectale at 1.80 a resolution 106 c3dnpA_ not modelled 97.5 10 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:stress response protein yhax; PDBTitle: crystal structure of stress response protein yhax from bacillus2 subtilis 107 d1rlma_ not modelled 97.5 9 Fold:HAD-like Superfamily:HAD-like Family:Predicted hydrolases Cof 108 c3l7yA_ not modelled 97.4 11 PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein smu.1108c; PDBTitle: the crystal structure of smu.1108c from streptococcus mutans ua159 109 c2iyeC_ not modelled 97.4 16 PDB header:hydrolase Chain: C: PDB Molecule:copper-transporting atpase; PDBTitle: structure of catalytic cpx-atpase domain copb-b 110 d1z5ga1 not modelled 97.4 15 Fold:HAD-like Superfamily:HAD-like Family:Class B acid phosphatase, AphA 111 d1rkqa_ not modelled 97.4 12 Fold:HAD-like Superfamily:HAD-like Family:Predicted hydrolases Cof 112 d1yj5a1 not modelled 97.4 26 Fold:HAD-like Superfamily:HAD-like Family:phosphatase domain of polynucleotide kinase 113 d2rbka1 not modelled 97.3 13 Fold:HAD-like Superfamily:HAD-like Family:Predicted hydrolases Cof 114 c3gygA_ not modelled 97.3 12 PDB header:hydrolase Chain: A: PDB Molecule:ntd biosynthesis operon putative hydrolase ntdb; PDBTitle: crystal structure of yhjk (haloacid dehalogenase-like hydrolase2 protein) from bacillus subtilis 115 d2b30a1 not modelled 97.3 13 Fold:HAD-like Superfamily:HAD-like Family:Predicted hydrolases Cof 116 d1s2oa1 not modelled 97.2 12 Fold:HAD-like Superfamily:HAD-like Family:Predicted hydrolases Cof 117 c3zvmA_ not modelled 97.2 29 PDB header:hydrolase/transferase/dna Chain: A: PDB Molecule:bifunctional polynucleotide phosphatase/kinase; PDBTitle: the structural basis for substrate recognition by mammalian2 polynucleotide kinase 3' phosphatase 118 c1xviA_ not modelled 97.2 12 PDB header:hydrolase Chain: A: PDB Molecule:putative mannosyl-3-phosphoglycerate phosphatase; PDBTitle: crystal structure of yedp, phosphatase-like domain protein2 from escherichia coli k12 119 d1xvia_ not modelled 97.2 12 Fold:HAD-like Superfamily:HAD-like Family:Predicted hydrolases Cof 120 d2bdea1 not modelled 97.0 15 Fold:HAD-like Superfamily:HAD-like Family:5' nucleotidase-like

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0