Phyre 2 alignment of P0AFA5 with d2ewoa1

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Job Description | P0AFA5
Confidence | 13.72% | Date | Thu Jan 5 11:25:44 GMT 2012
Rank | 75 | Aligned Residues | 32
% Identity | 9% | Template | d2ewoa1
SCOP info | Pentein, beta/alpha-propeller | Pentein | Porphyromonas-type peptidylarginine deiminase
Resolution | 2.90

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 72 | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | A | I | M | V | P | A | W | N | E | T | G | V | I | G | N | M | A | E | L | A | A | T | T | L | D | Y | E | N | Y | H | I | F | V | G | T
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | I | I | L | P | Q | Y | G | D | E | N | . | . | D | Q | L | A | K | Q | Q | V | Q | E | X | . | F | P | D | R | K | V | V | G | V | R
Template Known Secondary structure |  |  |  |  |  |  |  |  | S |  | T | T | . | . |  |  |  |  |  |  |  |  |  |  |  | . | S | T | T | S |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 317 | . | . | 320 | . | . | . | . | . | . | . |  |  | . | . | 330 | . | . | . | . | . | . | . | . |  | . | 340 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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