Phyre 2 alignment of P00490 with d3cjrb1

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Job Description | P00490
Confidence | 10.97% | Date | Thu Jan 5 10:56:40 GMT 2012
Rank | 75 | Aligned Residues | 23
% Identity | 22% | Template | d3cjrb1
SCOP info | DNA/RNA-binding 3-helical bundle | Ribosomal protein L11, C-terminal domain | Ribosomal protein L11, C-terminal domain
Resolution | 2.05

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 527 | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | A | I | F | D | I | Q | I | K | R | L | H | E | Y | K | R | Q | H | L | N | L | L | H | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | R | I | T | W | E | Q | V | L | E | I | A | K | Q | K | M | P | D | L | N | T | T | D | L
Template Known Secondary structure |  |  |  |  |  | S | G | G | G | T |  |  |  |  | S | T | T | T | S |  |  | S |  | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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