Phyre 2 alignment of P00490 with c2bpsA_

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Job Description | P00490
Confidence | 10.29% | Date | Thu Jan 5 10:56:40 GMT 2012
Rank | 78 | Aligned Residues | 32
% Identity | 22% | Template | c2bpsA_
PDB info | PDB header:ubiquitin | Chain: A: PDB Molecule:yukd protein; | PDBTitle: ubiquitin-like protein yukd of bacillus subtilis
Resolution | 2.7 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 577 | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | P | G | Y | Y | L | A | K | N | I | I | F | A | I | N | K | V | A | D | V | I | N | N | D | P | L | V | G | D | K | L | K | V | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | D | Y | H | P | V | K | K | V | I | D | I | A | W | Q | A | Q | S | . | V | S | M | P | P | R | E | G | H | W | I | R | V | V
Template Known Secondary structure |  |  | T | T | S | B | T | T |  |  |  |  |  |  |  |  |  | S |  | . |  |  | S |  |  |  | T | T |  |  |  |  |  | G
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . |  | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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