Phyre 2 Results for P00490

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Email | l.a.kelley@imperial.ac.uk
Description | P00490
Date | Thu Jan 5 10:56:40 GMT 2012
Unique Job ID | 4bf25789b0d67ce6

Summary |

Top model
Image coloured by rainbow N → C terminus
| Close Jmol

Model (left) based on template d1l5wa_
Top template information
Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:Oligosaccharide phosphorylase
Confidence and coverage
Confidence: | 100.0% | Coverage: | 100%
796 residues (100% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in Jmol

Sequence analysis |

Secondary structure and disorder prediction |

|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60
Sequence |  | M | S | Q | P | I | F | N | D | K | Q | F | Q | E | A | L | S | R | Q | W | Q | R | Y | G | L | N | S | A | A | E | M | T | P | R | Q | W | W | L | A | V | S | E | A | L | A | E | M | L | R | A | Q | P | F | A | K | P | V | A | N | Q | R
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120
Sequence |  | H | V | N | Y | I | S | M | E | F | L | I | G | R | L | T | G | N | N | L | L | N | L | G | W | Y | Q | D | V | Q | D | S | L | K | A | Y | D | I | N | L | T | D | L | L | E | E | E | I | D | P | A | L | G | N | G | G | L | G | R | L | A
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180
Sequence |  | A | C | F | L | D | S | M | A | T | V | G | Q | S | A | T | G | Y | G | L | N | Y | Q | Y | G | L | F | R | Q | S | F | V | D | G | K | Q | V | E | A | P | D | D | W | H | R | S | N | Y | P | W | F | R | H | N | E | A | L | D | V | Q | V
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240
Sequence |  | G | I | G | G | K | V | T | K | D | G | R | W | E | P | E | F | T | I | T | G | Q | A | W | D | L | P | V | V | G | Y | R | N | G | V | A | Q | P | L | R | L | W | Q | A | T | H | A | H | P | F | D | L | T | K | F | N | D | G | D | F | L
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300
Sequence |  | R | A | E | Q | Q | G | I | N | A | E | K | L | T | K | V | L | Y | P | N | D | N | H | T | A | G | K | K | L | R | L | M | Q | Q | Y | F | Q | C | A | C | S | V | A | D | I | L | R | R | H | H | L | A | G | R | K | L | H | E | L | A | D
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  | ? | ? | ? | ? |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |  | ? | ? |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360
Sequence |  | Y | E | V | I | Q | L | N | D | T | H | P | T | I | A | I | P | E | L | L | R | V | L | I | D | E | H | Q | M | S | W | D | D | A | W | A | I | T | S | K | T | F | A | Y | T | N | H | T | L | M | P | E | A | L | E | R | W | D | V | K | L
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420
Sequence |  | V | K | G | L | L | P | R | H | M | Q | I | I | N | E | I | N | T | R | F | K | T | L | V | E | K | T | W | P | G | D | E | K | V | W | A | K | L | A | V | V | H | D | K | Q | V | H | M | A | N | L | C | V | V | G | G | F | A | V | N | G
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |  | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480
Sequence |  | V | A | A | L | H | S | D | L | V | V | K | D | L | F | P | E | Y | H | Q | L | W | P | N | K | F | H | N | V | T | N | G | I | T | P | R | R | W | I | K | Q | C | N | P | A | L | A | A | L | L | D | K | S | L | Q | K | E | W | A | N | D
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540
Sequence |  | L | D | Q | L | I | N | L | E | K | F | A | D | D | A | K | F | R | Q | Q | Y | R | E | I | K | Q | A | N | K | V | R | L | A | E | F | V | K | V | R | T | G | I | E | I | N | P | Q | A | I | F | D | I | Q | I | K | R | L | H | E | Y | K
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600
Sequence |  | R | Q | H | L | N | L | L | H | I | L | A | L | Y | K | E | I | R | E | N | P | Q | A | D | R | V | P | R | V | F | L | F | G | A | K | A | A | P | G | Y | Y | L | A | K | N | I | I | F | A | I | N | K | V | A | D | V | I | N | N | D | P
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660
Sequence |  | L | V | G | D | K | L | K | V | V | F | L | P | D | Y | C | V | S | A | A | E | K | L | I | P | A | A | D | I | S | E | Q | I | S | T | A | G | K | E | A | S | G | T | G | N | M | K | L | A | L | N | G | A | L | T | V | G | T | L | D | G
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720
Sequence |  | A | N | V | E | I | A | E | K | V | G | E | E | N | I | F | I | F | G | H | T | V | E | Q | V | K | A | I | L | A | K | G | Y | D | P | V | K | W | R | K | K | D | K | V | L | D | A | V | L | K | E | L | E | S | G | K | Y | S | D | G | D
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780
Sequence |  | K | H | A | F | D | Q | M | L | H | S | I | G | K | Q | G | G | D | P | Y | L | V | M | A | D | F | A | A | Y | V | E | A | Q | K | Q | V | D | V | L | Y | R | D | Q | E | A | W | T | R | A | A | I | L | N | T | A | R | C | G | M | F | S
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 790 | . | . | . | . | . | . | .
Sequence |  | S | D | R | S | I | R | D | Y | Q | A | R | I | W | Q | A | K | R
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |

Confidence Key
High(9) |  |  |  |  |  |  |  |  |  |  | Low (0)

? | Disordered
| Alpha helix
| Beta strand

Domain analysis |

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank | Aligned region
--- | ---
1 |
| d1l5wa_ |

### PDB 1l5w chain A

Region: 2 - 797
Aligned: 796
Modelled: 796
Confidence: 100.0%
Identity: 100%
Fold: UDP-Glycosyltransferase/glycogen phosphorylase
Superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
Family: Oligosaccharide phosphorylase

Phyre2
2 |
| c3ddsB_ |

### PDB 3dds chain B

Region: 7 - 796
Aligned: 785
Modelled: 788
Confidence: 100.0%
Identity: 44%
PDB header:transferase
Chain: B: PDB Molecule:glycogen phosphorylase, liver form;
PDBTitle: crystal structure of glycogen phosphorylase complexed with an2 anthranilimide based inhibitor gsk261

Phyre2
3 |
| d2atia1 |

### PDB 2ati chain A domain 1

Region: 7 - 796
Aligned: 777
Modelled: 790
Confidence: 100.0%
Identity: 44%
Fold: UDP-Glycosyltransferase/glycogen phosphorylase
Superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
Family: Oligosaccharide phosphorylase

Phyre2
4 |
| d2gj4a1 |

### PDB 2gj4 chain A domain 1

Region: 7 - 797
Aligned: 776
Modelled: 791
Confidence: 100.0%
Identity: 44%
Fold: UDP-Glycosyltransferase/glycogen phosphorylase
Superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
Family: Oligosaccharide phosphorylase

Phyre2
5 |
| c2c4mA_ |

### PDB 2c4m chain A

Region: 12 - 796
Aligned: 772
Modelled: 785
Confidence: 100.0%
Identity: 45%
PDB header:transferase
Chain: A: PDB Molecule:glycogen phosphorylase;
PDBTitle: starch phosphorylase: structural studies explain oxyanion-2 dependent kinetic stability and regulatory control.

Phyre2
6 |
| d1ygpa_ |

### PDB 1ygp chain A

Region: 1 - 796
Aligned: 790
Modelled: 796
Confidence: 100.0%
Identity: 43%
Fold: UDP-Glycosyltransferase/glycogen phosphorylase
Superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
Family: Oligosaccharide phosphorylase

Phyre2
7 |
| c3o3cD_ |

### PDB 3o3c chain D

Region: 275 - 790
Aligned: 348
Modelled: 372
Confidence: 99.5%
Identity: 13%
PDB header:transferase
Chain: D: PDB Molecule:glycogen [starch] synthase isoform 2;
PDBTitle: glycogen synthase basal state udp complex

Phyre2
8 |
| c3nb0A_ |

### PDB 3nb0 chain A

Region: 275 - 790
Aligned: 352
Modelled: 373
Confidence: 99.4%
Identity: 16%
PDB header:transferase
Chain: A: PDB Molecule:glycogen [starch] synthase isoform 2;
PDBTitle: glucose-6-phosphate activated form of yeast glycogen synthase

Phyre2
9 |
| d1rzua_ |

### PDB 1rzu chain A

Region: 109 - 790
Aligned: 448
Modelled: 494
Confidence: 98.8%
Identity: 16%
Fold: UDP-Glycosyltransferase/glycogen phosphorylase
Superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
Family: Glycosyl transferases group 1

Phyre2
10 |
| c2x6rA_ |

### PDB 2x6r chain A

Region: 523 - 790
Aligned: 182
Modelled: 200
Confidence: 98.8%
Identity: 18%
PDB header:isomerase
Chain: A: PDB Molecule:trehalose-synthase tret;
PDBTitle: crystal structure of trehalose synthase tret from p.2 horikoshi produced by soaking in trehalose

Phyre2
11 |
| c1uquB_ |

### PDB 1uqu chain B

Region: 295 - 792
Aligned: 313
Modelled: 331
Confidence: 98.7%
Identity: 13%
PDB header:synthase
Chain: B: PDB Molecule:alpha, alpha-trehalose-phosphate synthase;
PDBTitle: trehalose-6-phosphate from e. coli bound with udp-glucose.

Phyre2
12 |
| d1uqta_ |

### PDB 1uqt chain A

Region: 295 - 792
Aligned: 312
Modelled: 329
Confidence: 98.6%
Identity: 18%
Fold: UDP-Glycosyltransferase/glycogen phosphorylase
Superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
Family: Trehalose-6-phosphate synthase, OtsA

Phyre2
13 |
| c2xmpB_ |

### PDB 2xmp chain B

Region: 523 - 795
Aligned: 187
Modelled: 205
Confidence: 98.6%
Identity: 17%
PDB header:sugar binding protein
Chain: B: PDB Molecule:trehalose-synthase tret;
PDBTitle: crystal structure of trehalose synthase tret mutant e326a2 from p.horishiki in complex with udp

Phyre2
14 |
| c2qzsA_ |

### PDB 2qzs chain A

Region: 508 - 790
Aligned: 192
Modelled: 220
Confidence: 98.4%
Identity: 18%
PDB header:transferase
Chain: A: PDB Molecule:glycogen synthase;
PDBTitle: crystal structure of wild-type e.coli gs in complex with adp2 and glucose(wtgsb)

Phyre2
15 |
| d2bisa1 |

### PDB 2bis chain A domain 1

Region: 109 - 790
Aligned: 413
Modelled: 457
Confidence: 98.1%
Identity: 19%
Fold: UDP-Glycosyltransferase/glycogen phosphorylase
Superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
Family: Glycosyl transferases group 1

Phyre2
16 |
| c2r60A_ |

### PDB 2r60 chain A

Region: 506 - 792
Aligned: 203
Modelled: 221
Confidence: 98.1%
Identity: 20%
PDB header:transferase
Chain: A: PDB Molecule:glycosyl transferase, group 1;
PDBTitle: structure of apo sucrose phosphate synthase (sps) of2 halothermothrix orenii

Phyre2
17 |
| c3s29C_ |

### PDB 3s29 chain C

Region: 520 - 794
Aligned: 196
Modelled: 213
Confidence: 97.9%
Identity: 14%
PDB header:transferase
Chain: C: PDB Molecule:sucrose synthase 1;
PDBTitle: the crystal structure of sucrose synthase-1 from arabidopsis thaliana2 and its functional implications.

Phyre2
18 |
| c3c4vB_ |

### PDB 3c4v chain B

Region: 523 - 790
Aligned: 173
Modelled: 181
Confidence: 97.8%
Identity: 23%
PDB header:transferase
Chain: B: PDB Molecule:predicted glycosyltransferases;
PDBTitle: structure of the retaining glycosyltransferase msha:the2 first step in mycothiol biosynthesis. organism:3 corynebacterium glutamicum : complex with udp and 1l-ins-1-4 p.

Phyre2
19 |
| c3oy2A_ |

### PDB 3oy2 chain A

Region: 515 - 790
Aligned: 213
Modelled: 227
Confidence: 97.7%
Identity: 13%
PDB header:viral protein,transferase
Chain: A: PDB Molecule:glycosyltransferase b736l;
PDBTitle: crystal structure of a putative glycosyltransferase from paramecium2 bursaria chlorella virus ny2a

Phyre2
20 |
| d2f9fa1 |

### PDB 2f9f chain A domain 1

Region: 522 - 686
Aligned: 137
Modelled: 165
Confidence: 96.8%
Identity: 14%
Fold: UDP-Glycosyltransferase/glycogen phosphorylase
Superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
Family: Glycosyl transferases group 1

Phyre2
21 |
22 |
23 |
24 |
25 |
26 |
27 |
28 |
29 |
30 |
31 |
32 |
33 |
34 |
35 |
36 |
37 |
38 |
39 |
40 |
41 |
42 |
43 |
44 |
45 |
46 |
47 |
48 |
49 |
50 |
51 |
52 |
53 |
54 |
55 |
56 |
57 |
58 |
59 |
60 |
61 |
62 |
63 |
64 |
65 |
66 |
67 |
68 |
69 |
70 |
71 |
72 |
73 |
74 |
75 |
76 |
77 |
78 |
79 |
80 |
81 |
82 |
83 |
84 |
85 |
86 |
87 |
88 |
89 |
90 |
91 |
92 |
93 |
94 |
95 |
96 |
97 |
98 |
99 |

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | d1l5wa_ |
|  | 100.0 | 100 | Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:Oligosaccharide phosphorylase
2 | c3ddsB_ |
|  | 100.0 | 44 | PDB header:transferase Chain: B: PDB Molecule:glycogen phosphorylase, liver form; PDBTitle: crystal structure of glycogen phosphorylase complexed with an2 anthranilimide based inhibitor gsk261
3 | d2atia1 |
|  | 100.0 | 44 | Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:Oligosaccharide phosphorylase
4 | d2gj4a1 |
|  | 100.0 | 44 | Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:Oligosaccharide phosphorylase
5 | c2c4mA_ |
|  | 100.0 | 45 | PDB header:transferase Chain: A: PDB Molecule:glycogen phosphorylase; PDBTitle: starch phosphorylase: structural studies explain oxyanion-2 dependent kinetic stability and regulatory control.
6 | d1ygpa_ |
|  | 100.0 | 43 | Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:Oligosaccharide phosphorylase
7 | c3o3cD_ |
|  | 99.5 | 13 | PDB header:transferase Chain: D: PDB Molecule:glycogen [starch] synthase isoform 2; PDBTitle: glycogen synthase basal state udp complex
8 | c3nb0A_ |
|  | 99.4 | 16 | PDB header:transferase Chain: A: PDB Molecule:glycogen [starch] synthase isoform 2; PDBTitle: glucose-6-phosphate activated form of yeast glycogen synthase
9 | d1rzua_ |
|  | 98.8 | 16 | Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:Glycosyl transferases group 1
10 | c2x6rA_ |
|  | 98.8 | 18 | PDB header:isomerase Chain: A: PDB Molecule:trehalose-synthase tret; PDBTitle: crystal structure of trehalose synthase tret from p.2 horikoshi produced by soaking in trehalose
11 | c1uquB_ |
|  | 98.7 | 13 | PDB header:synthase Chain: B: PDB Molecule:alpha, alpha-trehalose-phosphate synthase; PDBTitle: trehalose-6-phosphate from e. coli bound with udp-glucose.
12 | d1uqta_ |
|  | 98.6 | 18 | Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:Trehalose-6-phosphate synthase, OtsA
13 | c2xmpB_ |
|  | 98.6 | 17 | PDB header:sugar binding protein Chain: B: PDB Molecule:trehalose-synthase tret; PDBTitle: crystal structure of trehalose synthase tret mutant e326a2 from p.horishiki in complex with udp
14 | c2qzsA_ |
|  | 98.4 | 18 | PDB header:transferase Chain: A: PDB Molecule:glycogen synthase; PDBTitle: crystal structure of wild-type e.coli gs in complex with adp2 and glucose(wtgsb)
15 | d2bisa1 |
|  | 98.1 | 19 | Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:Glycosyl transferases group 1
16 | c2r60A_ |
|  | 98.1 | 20 | PDB header:transferase Chain: A: PDB Molecule:glycosyl transferase, group 1; PDBTitle: structure of apo sucrose phosphate synthase (sps) of2 halothermothrix orenii
17 | c3s29C_ |
|  | 97.9 | 14 | PDB header:transferase Chain: C: PDB Molecule:sucrose synthase 1; PDBTitle: the crystal structure of sucrose synthase-1 from arabidopsis thaliana2 and its functional implications.
18 | c3c4vB_ |
|  | 97.8 | 23 | PDB header:transferase Chain: B: PDB Molecule:predicted glycosyltransferases; PDBTitle: structure of the retaining glycosyltransferase msha:the2 first step in mycothiol biosynthesis. organism:3 corynebacterium glutamicum : complex with udp and 1l-ins-1-4 p.
19 | c3oy2A_ |
|  | 97.7 | 13 | PDB header:viral protein,transferase Chain: A: PDB Molecule:glycosyltransferase b736l; PDBTitle: crystal structure of a putative glycosyltransferase from paramecium2 bursaria chlorella virus ny2a
20 | d2f9fa1 |
|  | 96.8 | 14 | Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:Glycosyl transferases group 1
21 | d2bfwa1 |
| not modelled | 96.8 | 19 | Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:Glycosyl transferases group 1
22 | c3okaA_ |
| not modelled | 96.7 | 22 | PDB header:transferase Chain: A: PDB Molecule:gdp-mannose-dependent alpha-(1-6)-phosphatidylinositol PDBTitle: crystal structure of corynebacterium glutamicum pimb' in complex with2 gdp-man (triclinic crystal form)
23 | c2gejA_ |
| not modelled | 96.6 | 17 | PDB header:transferase Chain: A: PDB Molecule:phosphatidylinositol mannosyltransferase (pima); PDBTitle: crystal structure of phosphatidylinositol mannosyltransferase (pima)2 from mycobacterium smegmatis in complex with gdp-man
24 | c2jjmH_ |
| not modelled | 96.6 | 19 | PDB header:transferase Chain: H: PDB Molecule:glycosyl transferase, group 1 family protein; PDBTitle: crystal structure of a family gt4 glycosyltransferase from2 bacillus anthracis orf ba1558.
25 | d2iw1a1 |
| not modelled | 96.1 | 16 | Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:Glycosyl transferases group 1
26 | c2x0dA_ |
| not modelled | 95.3 | 13 | PDB header:transferase Chain: A: PDB Molecule:wsaf; PDBTitle: apo structure of wsaf
27 | c3ot5D_ |
| not modelled | 91.7 | 13 | PDB header:isomerase Chain: D: PDB Molecule:udp-n-acetylglucosamine 2-epimerase; PDBTitle: 2.2 angstrom resolution crystal structure of putative udp-n-2 acetylglucosamine 2-epimerase from listeria monocytogenes
28 | c2vsnB_ |
| not modelled | 89.7 | 20 | PDB header:transferase Chain: B: PDB Molecule:xcogt; PDBTitle: structure and topological arrangement of an o-glcnac2 transferase homolog: insight into molecular control of3 intracellular glycosylation
29 | d1f6da_ |
| not modelled | 86.5 | 18 | Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:UDP-N-acetylglucosamine 2-epimerase
30 | c3rhzB_ |
| not modelled | 86.0 | 13 | PDB header:transferase Chain: B: PDB Molecule:nucleotide sugar synthetase-like protein; PDBTitle: structure and functional analysis of a new subfamily of2 glycosyltransferases required for glycosylation of serine-rich3 streptococcal adhesions
31 | c3pe3D_ |
| not modelled | 78.7 | 13 | PDB header:transferase Chain: D: PDB Molecule:udp-n-acetylglucosamine--peptide n- PDBTitle: structure of human o-glcnac transferase and its complex with a peptide2 substrate
32 | c3dzcA_ |
| not modelled | 70.9 | 14 | PDB header:isomerase Chain: A: PDB Molecule:udp-n-acetylglucosamine 2-epimerase; PDBTitle: 2.35 angstrom resolution structure of wecb (vc0917), a udp-n-2 acetylglucosamine 2-epimerase from vibrio cholerae.
33 | c3r6mD_ |
| not modelled | 57.3 | 20 | PDB header:hydrolase Chain: D: PDB Molecule:yeaz, resuscitation promoting factor; PDBTitle: crystal structure of vibrio parahaemolyticus yeaz
34 | c1okjB_ |
| not modelled | 54.5 | 21 | PDB header:hydrolase Chain: B: PDB Molecule:hypothetical protease yeaz; PDBTitle: crystal structure of the essential e. coli yeaz2 protein by mad method using the gadolinium complex3 "dotma"
35 | d1w36c1 |
| not modelled | 51.3 | 17 | Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Tandem AAA-ATPase domain
36 | c3qhpB_ |
| not modelled | 46.9 | 11 | PDB header:transferase Chain: B: PDB Molecule:type 1 capsular polysaccharide biosynthesis protein j PDBTitle: crystal structure of the catalytic domain of cholesterol-alpha-2 glucosyltransferase from helicobacter pylori
37 | d1x99a_ |
| not modelled | 33.5 | 33 | Fold:Cytolysin/lectin Superfamily:Cytolysin/lectin Family:Fungal fruit body lectin
38 | d1y2ta_ |
| not modelled | 32.8 | 33 | Fold:Cytolysin/lectin Superfamily:Cytolysin/lectin Family:Fungal fruit body lectin
39 | d1v4va_ |
| not modelled | 32.1 | 12 | Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:UDP-N-acetylglucosamine 2-epimerase
40 | c1yz4A_ |
| not modelled | 31.7 | 11 | PDB header:hydrolase Chain: A: PDB Molecule:dual specificity phosphatase-like 15 isoform a; PDBTitle: crystal structure of dusp15
41 | c2z8tX_ |
| not modelled | 31.3 | 13 | PDB header:hydrolase Chain: X: PDB Molecule:protein-glutaminase; PDBTitle: crystal structure of protein-glutaminase of c.proteolyticum2 strain 9670
42 | c2ofeA_ |
| not modelled | 27.5 | 33 | PDB header:sugar binding protein Chain: A: PDB Molecule:sclerotium rolfsii lectin; PDBTitle: the crystal structure of sclerotium rolfsii lectin in complex with n-2 acetyl-d-glucosamine
43 | d1kx5b_ |
| not modelled | 26.9 | 14 | Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones
44 | c2iv3B_ |
| not modelled | 26.0 | 14 | PDB header:transferase Chain: B: PDB Molecule:glycosyltransferase; PDBTitle: crystal structure of avigt4, a glycosyltransferase involved2 in avilamycin a biosynthesis
45 | c3g8qA_ |
| not modelled | 25.0 | 42 | PDB header:rna binding protein Chain: A: PDB Molecule:predicted rna-binding protein, contains thump PDBTitle: a cytidine deaminase edits c-to-u in transfer rnas in2 archaea
46 | c2g6zB_ |
| not modelled | 23.2 | 13 | PDB header:hydrolase Chain: B: PDB Molecule:dual specificity protein phosphatase 5; PDBTitle: crystal structure of human dusp5
47 | d2f8la1 |
| not modelled | 21.5 | 30 | Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:N-6 DNA Methylase-like
48 | c1zhcA_ |
| not modelled | 20.9 | 14 | PDB header:unknown function Chain: A: PDB Molecule:hypothetical protein hp1242; PDBTitle: solution structure of hp1242 from helicobacter pylori
49 | c2npiB_ |
| not modelled | 20.9 | 16 | PDB header:transcription Chain: B: PDB Molecule:protein clp1; PDBTitle: clp1-atp-pcf11 complex
50 | c2oudA_ |
| not modelled | 20.6 | 22 | PDB header:hydrolase Chain: A: PDB Molecule:dual specificity protein phosphatase 10; PDBTitle: crystal structure of the catalytic domain of human mkp5
51 | d1id3b_ |
| not modelled | 20.1 | 14 | Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones
52 | c3pn1A_ |
| not modelled | 18.6 | 19 | PDB header:ligase/ligase inhibitor Chain: A: PDB Molecule:dna ligase; PDBTitle: novel bacterial nad+-dependent dna ligase inhibitors with broad2 spectrum potency and antibacterial efficacy in vivo
53 | c1keeH_ |
| not modelled | 17.0 | 17 | PDB header:ligase Chain: H: PDB Molecule:carbamoyl-phosphate synthetase small chain; PDBTitle: inactivation of the amidotransferase activity of carbamoyl phosphate2 synthetase by the antibiotic acivicin
54 | c3se4B_ |
| not modelled | 16.8 | 29 | PDB header:immune system receptor Chain: B: PDB Molecule:interferon omega-1; PDBTitle: human ifnw-ifnar ternary complex
55 | c1r30A_ |
| not modelled | 16.3 | 9 | PDB header:transferase Chain: A: PDB Molecule:biotin synthase; PDBTitle: the crystal structure of biotin synthase, an s-2 adenosylmethionine-dependent radical enzyme
56 | d1r30a_ |
| not modelled | 16.3 | 9 | Fold:TIM beta/alpha-barrel Superfamily:Radical SAM enzymes Family:Biotin synthase
57 | d1bh9b_ |
| not modelled | 16.1 | 18 | Fold:Histone-fold Superfamily:Histone-fold Family:TBP-associated factors, TAFs
58 | d1yb3a1 |
| not modelled | 16.0 | 21 | Fold:YktB/PF0168-like Superfamily:YktB/PF0168-like Family:PF0168-like
59 | c2a6aB_ |
| not modelled | 15.7 | 12 | PDB header:hydrolase Chain: B: PDB Molecule:hypothetical protein tm0874; PDBTitle: crystal structure of glycoprotein endopeptidase (tm0874) from2 thermotoga maritima at 2.50 a resolution
60 | c1wrmA_ |
| not modelled | 15.5 | 13 | PDB header:hydrolase Chain: A: PDB Molecule:dual specificity phosphatase 22; PDBTitle: crystal structure of jsp-1
61 | c3emuA_ |
| not modelled | 14.8 | 19 | PDB header:hydrolase Chain: A: PDB Molecule:leucine rich repeat and phosphatase domain PDBTitle: crystal structure of a leucine rich repeat and phosphatase2 domain containing protein from entamoeba histolytica
62 | d1m3ga_ |
| not modelled | 14.8 | 14 | Fold:(Phosphotyrosine protein) phosphatases II Superfamily:(Phosphotyrosine protein) phosphatases II Family:Dual specificity phosphatase-like
63 | c3rgqA_ |
| not modelled | 14.8 | 16 | PDB header:hydrolase Chain: A: PDB Molecule:protein-tyrosine phosphatase mitochondrial 1; PDBTitle: crystal structure of ptpmt1 in complex with pi(5)p
64 | c2hcmA_ |
| not modelled | 14.5 | 13 | PDB header:hydrolase Chain: A: PDB Molecule:dual specificity protein phosphatase; PDBTitle: crystal structure of mouse putative dual specificity phosphatase2 complexed with zinc tungstate, new york structural genomics3 consortium
65 | c2e0tA_ |
| not modelled | 14.3 | 14 | PDB header:hydrolase Chain: A: PDB Molecule:dual specificity phosphatase 26; PDBTitle: crystal structure of catalytic domain of dual specificity phosphatase2 26, ms0830 from homo sapiens
66 | d1o58a_ |
| not modelled | 14.2 | 18 | Fold:Tryptophan synthase beta subunit-like PLP-dependent enzymes Superfamily:Tryptophan synthase beta subunit-like PLP-dependent enzymes Family:Tryptophan synthase beta subunit-like PLP-dependent enzymes
67 | d2enda_ |
| not modelled | 13.9 | 18 | Fold:T4 endonuclease V Superfamily:T4 endonuclease V Family:T4 endonuclease V
68 | d2huec1 |
| not modelled | 13.9 | 14 | Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones
69 | c1yhuA_ |
| not modelled | 13.3 | 17 | PDB header:oxygen storage/transport Chain: A: PDB Molecule:hemoglobin a1 chain; PDBTitle: crystal structure of riftia pachyptila c1 hemoglobin reveals novel2 assembly of 24 subunits.
70 | c3piwA_ |
| not modelled | 12.1 | 24 | PDB header:cytokine Chain: A: PDB Molecule:type i interferon 2; PDBTitle: zebrafish interferon 2
71 | d2csua3 |
| not modelled | 12.1 | 35 | Fold:Flavodoxin-like Superfamily:Succinyl-CoA synthetase domains Family:Succinyl-CoA synthetase domains
72 | c1eysC_ |
| not modelled | 11.2 | 22 | PDB header:electron transport Chain: C: PDB Molecule:photosynthetic reaction center; PDBTitle: crystal structure of photosynthetic reaction center from a2 thermophilic bacterium, thermochromatium tepidum
73 | d1eysc_ |
| not modelled | 11.2 | 22 | Fold:Multiheme cytochromes Superfamily:Multiheme cytochromes Family:Photosynthetic reaction centre (cytochrome subunit)
74 | c3bacA_ |
| not modelled | 11.1 | 19 | PDB header:ligase Chain: A: PDB Molecule:dna ligase; PDBTitle: structural basis for the inhibition of bacterial nad+2 dependent dna ligase
75 | d3cjrb1 |
| not modelled | 11.0 | 22 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Ribosomal protein L11, C-terminal domain Family:Ribosomal protein L11, C-terminal domain
76 | d1v9pa3 |
| not modelled | 10.6 | 16 | Fold:ATP-grasp Superfamily:DNA ligase/mRNA capping enzyme, catalytic domain Family:Adenylation domain of NAD+-dependent DNA ligase
77 | d3etja2 |
| not modelled | 10.5 | 38 | Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:BC N-terminal domain-like
78 | c2bpsA_ |
| not modelled | 10.3 | 22 | PDB header:ubiquitin Chain: A: PDB Molecule:yukd protein; PDBTitle: ubiquitin-like protein yukd of bacillus subtilis
79 | d1ta8a_ |
| not modelled | 10.1 | 26 | Fold:ATP-grasp Superfamily:DNA ligase/mRNA capping enzyme, catalytic domain Family:Adenylation domain of NAD+-dependent DNA ligase
80 | d1vhra_ |
| not modelled | 10.1 | 19 | Fold:(Phosphotyrosine protein) phosphatases II Superfamily:(Phosphotyrosine protein) phosphatases II Family:Dual specificity phosphatase-like
81 | c3f4yF_ |
| not modelled | 10.0 | 64 | PDB header:viral protein Chain: F: PDB Molecule:mutant peptide derived from hiv gp41 chr domain; PDBTitle: hiv gp41 six-helix bundle containing a mutant chr alpha-2 peptide sequence
82 | d1b5la_ |
| not modelled | 9.5 | 29 | Fold:4-helical cytokines Superfamily:4-helical cytokines Family:Interferons/interleukin-10 (IL-10)
83 | c1hfeT_ |
| not modelled | 9.5 | 31 | PDB header:hydrogenase Chain: T: PDB Molecule:protein (fe-only hydrogenase (e.c.1.18.99.1) PDBTitle: 1.6 a resolution structure of the fe-only hydrogenase from2 desulfovibrio desulfuricans
84 | d1hfes_ |
| not modelled | 9.5 | 31 | Fold:Non-globular all-alpha subunits of globular proteins Superfamily:Fe-only hydrogenase smaller subunit Family:Fe-only hydrogenase smaller subunit
85 | d1hbna2 |
| not modelled | 9.3 | 30 | Fold:Ferredoxin-like Superfamily:Methyl-coenzyme M reductase subunits Family:Methyl-coenzyme M reductase alpha and beta chain N-terminal domain
86 | d1qcsa1 |
| not modelled | 9.0 | 13 | Fold:Double psi beta-barrel Superfamily:ADC-like Family:Cdc48 N-terminal domain-like
87 | d1u3da1 |
| not modelled | 8.9 | 21 | Fold:Cryptochrome/photolyase FAD-binding domain Superfamily:Cryptochrome/photolyase FAD-binding domain Family:Cryptochrome/photolyase FAD-binding domain
88 | d1o82a_ |
| not modelled | 8.6 | 70 | Fold:Saposin-like Superfamily:Bacteriocin AS-48 Family:Bacteriocin AS-48
89 | c2imgA_ |
| not modelled | 8.6 | 16 | PDB header:hydrolase Chain: A: PDB Molecule:dual specificity protein phosphatase 23; PDBTitle: crystal structure of dual specificity protein phosphatase2 23 from homo sapiens in complex with ligand malate ion
90 | c3bdkB_ |
| not modelled | 8.6 | 12 | PDB header:lyase Chain: B: PDB Molecule:d-mannonate dehydratase; PDBTitle: crystal structure of streptococcus suis mannonate2 dehydratase complexed with substrate analogue
91 | d1di1a_ |
| not modelled | 8.5 | 13 | Fold:Terpenoid synthases Superfamily:Terpenoid synthases Family:Aristolochene/pentalenene synthase
92 | d1pq4a_ |
| not modelled | 8.5 | 18 | Fold:Chelatase-like Superfamily:"Helical backbone" metal receptor Family:TroA-like
93 | d2ipqx1 |
| not modelled | 8.4 | 14 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:STY4665 C-terminal domain-like
94 | c1yl7F_ |
| not modelled | 8.4 | 23 | PDB header:oxidoreductase Chain: F: PDB Molecule:dihydrodipicolinate reductase; PDBTitle: the crystal structure of mycobacterium tuberculosis2 dihydrodipicolinate reductase (rv2773c) in complex with nadh (crystal3 form c)
95 | d2b0ja2 |
| not modelled | 8.4 | 15 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:6-phosphogluconate dehydrogenase-like, N-terminal domain
96 | d3eeqa1 |
| not modelled | 8.2 | 2 | Fold:CobE/GbiG C-terminal domain-like Superfamily:CobE/GbiG C-terminal domain-like Family:CobE/GbiG C-terminal domain-like
97 | c2owoA_ |
| not modelled | 8.2 | 19 | PDB header:ligase/dna Chain: A: PDB Molecule:dna ligase; PDBTitle: last stop on the road to repair: structure of e.coli dna ligase bound2 to nicked dna-adenylate
98 | c2ktlA_ |
| not modelled | 8.2 | 21 | PDB header:ligase Chain: A: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: structure of c-terminal domain from mttyrrs of a. nidulans
99 | c2diiA_ |
| not modelled | 8.1 | 20 | PDB header:transcription Chain: A: PDB Molecule:tfiih basal transcription factor complex p62 PDBTitle: solution structure of the bsd domain of human tfiih basal2 transcription factor complex p62 subunit

Binding site prediction |

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
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Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0