Phyre 2 alignment of P00490 with d1qcsa1

Return to main results | Retrieve Phyre Job Id

Job Description | P00490
Confidence | 9.01% | Date | Thu Jan 5 10:56:40 GMT 2012
Rank | 86 | Aligned Residues | 16
% Identity | 13% | Template | d1qcsa1
SCOP info | Double psi beta-barrel | ADC-like | Cdc48 N-terminal domain-like
Resolution | 1.90

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 568 | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | V | F | L | F | G | A | K | A | A | P | G | Y | Y | L | A | K
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | Y | I | F | T | L | R | T | H | P | S | V | V | P | G | S
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  | T | T | S |  | T | T |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 44 | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions