Phyre 2 alignment of P00490 with c3se4B_

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Job Description | P00490
Confidence | 16.75% | Date | Thu Jan 5 10:56:40 GMT 2012
Rank | 54 | Aligned Residues | 28
% Identity | 29% | Template | c3se4B_
PDB info | PDB header:immune system receptor | Chain: B: PDB Molecule:interferon omega-1; | PDBTitle: human ifnw-ifnar ternary complex
Resolution | 3.50 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 318 | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . |  |  |  |  | . | 340 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |
Query Sequence |  | L | L | R | V | L | I | D | E | H | Q | M | S | W | D | D | A | W | A | I | T | S | . | . | . | . | K | T | F | A | Y | T | N | H
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | I | R | V | Y | L | K | E | K | K | Y | S | . | D | C | A | W | E | V | V | R | M | E | I | M | K | S | L | F | L | S | T | N
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  | T | S |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 128 | . | 130 | . | . | . | . | . | . | . | . | . |  | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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