Job Description P0C058 Confidence 96.78% Date Wed Jan 25 15:20:35 GMT 2012 Rank 17 Aligned Residues 75 % Identity 16% Template c3eudE_ PDB info PDB header:nuclear protein Chain: E: PDB Molecule:protein shq1; PDBTitle: structure of the cs domain of the essential h/aca rnp2 assembly protein shq1p Resolution 2.40 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.				.	.	.	.
Predicted Secondary structure																											.	.																																															.	.	.
Query SS confidence																											.	.																																															.	.	.
Query Sequence		P	P	Y	N	I	E	K	S	D	D	N	H	Y	R	I	T	L	A	L	A	G	F	R	Q	E	.	.	D	L	E	I	Q	L	E	G	T	R	L	S	V	K	G	T	P	E	Q	P	K	E	E	K	K	W	L	H	Q	G	L	M	N	Q	P	F	S	L	S	F	T	L	A	E	N	M	.	.	.	E	V	S	G
Query Conservation																											.	.																																															.	.	.
Alig confidence										.																	.	.																.	.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template Conservation										.																																		.	.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	R	F	S	I	T	Q	D	.	E	E	F	I	F	L	K	I	F	I	S	N	I	R	F	S	A	V	G	L	E	I	I	I	Q	E	N	X	I	I	F	H	L	.	.	.	.	.	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	Y	L	R	L	R	F	P	H	E	L	I	D	D	E	R	S	T
Template Known Secondary structure										.	S	S										S					S	S	S							T	T							.	.	.	.	.	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.								S	S					S	T	T
Template Predicted Secondary structure										.																																		.	.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.						.	.														.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		108	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		A	T	F	.	.	V	N	G	L	L	H	I	D	L	I	R	N	E	P	E	P
Query Conservation					.	.
Alig confidence					.	.
Template Conservation
Template Sequence		A	Q	Y	D	S	K	D	E	C	I	N	V	K	V	A	K	L	N	K	N	E
Template Known Secondary structure						T	T	T	T									S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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