BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (239 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0AFT7 Uncharacterized response regulatory protein yehT... 487 e-136 UniRef50_C6CMQ8 Two component transcriptional regulator, LytTR f... 346 3e-94 UniRef50_Q8DET1 Uncharacterized response regulatory protein VV1_... 254 2e-66 UniRef50_Q8EDD7 Uncharacterized response regulatory protein SO_2... 247 3e-64 UniRef50_B6R920 Response regulator receiver protein n=2 Tax=Prot... 245 9e-64 UniRef50_A7HAA1 Two component transcriptional regulator, LytTR f... 216 6e-55 UniRef50_B8JGA2 Two component transcriptional regulator, LytTR f... 191 2e-47 UniRef50_Q2S5X7 Alginate biosynthesis regulatory protein n=1 Tax... 162 1e-38 UniRef50_Q2RYN6 Two-component system response regulator protein ... 161 2e-38 UniRef50_C6XTW9 LytTr DNA-binding region n=3 Tax=Sphingobacteria... 159 1e-37 UniRef50_A1ZD68 LytTr DNA-binding response regulator n=1 Tax=Mic... 158 1e-37 UniRef50_C9RRP4 Two component transcriptional regulator, LytTR f... 149 7e-35 UniRef50_C7PBU1 Two component transcriptional regulator, LytTR f... 149 8e-35 UniRef50_C5RQ54 Two component transcriptional regulator, LytTR f... 149 1e-34 UniRef50_C7PM85 Two component transcriptional regulator, LytTR f... 147 2e-34 UniRef50_Q82Z76 Sensory transduction protein lytT n=22 Tax=Enter... 147 2e-34 UniRef50_B8KHY1 Response regulator n=1 Tax=gamma proteobacterium... 146 5e-34 UniRef50_C6W416 Two component transcriptional regulator, LytTR f... 145 1e-33 UniRef50_A1HLU8 Response regulator receiver protein n=1 Tax=Ther... 145 2e-33 UniRef50_A6LQW3 Two component transcriptional regulator, LytTR f... 144 3e-33 UniRef50_Q484G6 LytTr DNA-binding response regulator n=1 Tax=Col... 144 3e-33 UniRef50_D0XXI4 Two component transcriptional regulator, LytTR f... 142 9e-33 UniRef50_Q2RH27 Transcriptional regulator, LytR/AlgR family n=2 ... 142 1e-32 UniRef50_Q1ILF8 Transcriptional regulator, LytR/AlgR family n=1 ... 141 2e-32 UniRef50_B7R6J5 LytTr DNA-binding domain family protein n=2 Tax=... 140 3e-32 UniRef50_B1HWP9 Sensory transduction protein n=2 Tax=Bacillaceae... 140 4e-32 UniRef50_B5JNB1 LytTr DNA-binding domain family n=1 Tax=Verrucom... 139 7e-32 UniRef50_C6PV14 Two component transcriptional regulator, LytTR f... 139 7e-32 UniRef50_Q814J1 Sensory transduction protein lytT n=81 Tax=Bacte... 138 1e-31 UniRef50_A7GIP3 DNA-binding response regulator, LytTr family n=1... 138 2e-31 UniRef50_B8CWX9 Two component transcriptional regulator, LytTR f... 138 2e-31 UniRef50_Q67QS1 Two-component response regulator n=1 Tax=Symbiob... 137 3e-31 UniRef50_B1ZUF0 Two component transcriptional regulator, LytTR f... 137 3e-31 UniRef50_Q2S053 LytTr DNA-binding domain family n=2 Tax=Rhodothe... 137 4e-31 UniRef50_C0ZI44 Two-component response regulator n=1 Tax=Breviba... 136 7e-31 UniRef50_B1ZMA5 Two component transcriptional regulator, LytTR f... 135 9e-31 UniRef50_C9RCQ8 Two component transcriptional regulator, LytTR f... 135 1e-30 UniRef50_Q1IKW2 Transcriptional regulator, LytR/AlgR family n=2 ... 135 1e-30 UniRef50_B4CWB7 Two component transcriptional regulator, LytTR f... 135 1e-30 UniRef50_B8FVL1 Two component transcriptional regulator, LytTR f... 134 2e-30 UniRef50_B1I1G2 Response regulator receiver protein n=1 Tax=Cand... 134 2e-30 UniRef50_Q7P589 Two-component response regulator n=15 Tax=Fusoba... 134 3e-30 UniRef50_C7MLP3 Response regulator of the LytR/AlgR family n=8 T... 134 3e-30 UniRef50_C1P760 Two component transcriptional regulator, LytTR f... 134 3e-30 UniRef50_Q1IUM5 Transcriptional regulator, LytR/AlgR family n=1 ... 133 4e-30 UniRef50_C7R6S4 Two component transcriptional regulator, LytTR f... 133 5e-30 UniRef50_Q1YRG1 Response regulator n=1 Tax=gamma proteobacterium... 133 5e-30 UniRef50_C6Y3C9 Response regulator receiver n=1 Tax=Pedobacter h... 132 7e-30 UniRef50_Q02A01 Response regulator receiver protein n=1 Tax=Cand... 132 7e-30 UniRef50_A0Y0Z9 Response regulator of the LytR/AlgR family prote... 132 8e-30 UniRef50_B5YGI8 Sensory transduction protein LytT n=1 Tax=Thermo... 132 9e-30 UniRef50_Q1ISZ6 Transcriptional regulator, LytR/AlgR family n=2 ... 131 2e-29 UniRef50_A5VAK9 Two component transcriptional regulator, LytTR f... 130 3e-29 UniRef50_B1ZQK1 Two component transcriptional regulator, LytTR f... 130 3e-29 UniRef50_Q5WAM2 Two-component response regulator n=2 Tax=Bacillu... 130 3e-29 UniRef50_A1TXX0 Response regulator receiver protein n=3 Tax=Mari... 130 3e-29 UniRef50_A3YCL0 Response regulator n=1 Tax=Marinomonas sp. MED12... 130 3e-29 UniRef50_Q482L9 LytTr DNA-binding response regulator n=9 Tax=Alt... 130 3e-29 UniRef50_A8MGZ3 Two component transcriptional regulator, LytTR f... 130 3e-29 UniRef50_UPI0001C42EF9 two-component response regulator n=1 Tax=... 130 4e-29 UniRef50_C5WEM5 Two-component response regulator n=1 Tax=Strepto... 129 9e-29 UniRef50_Q0QJA1 Putative response regulator n=1 Tax=Pseudoaltero... 129 9e-29 UniRef50_Q21E91 LytTr DNA-binding region n=2 Tax=Saccharophagus ... 129 1e-28 UniRef50_B1ZZB5 Two component transcriptional regulator, LytTR f... 129 1e-28 UniRef50_Q3AA03 DNA-binding response regulator n=1 Tax=Carboxydo... 129 1e-28 UniRef50_A4A8V2 Sensory transduction protein lytR n=2 Tax=unclas... 128 2e-28 UniRef50_C1AA08 LytT family two-component response regulator n=2... 127 3e-28 UniRef50_D0MDS1 Two component transcriptional regulator, LytTR f... 127 5e-28 UniRef50_A4AS29 Two-component system, regulatory protein n=1 Tax... 126 5e-28 UniRef50_B0TBI1 Sensory transduction protein lytt n=1 Tax=Heliob... 126 5e-28 UniRef50_Q03GB5 Response regulator of the LytR/AlgR family n=7 T... 126 6e-28 UniRef50_C6W213 Two component transcriptional regulator, LytTR f... 126 7e-28 UniRef50_C5CI41 Two component transcriptional regulator, LytTR f... 126 8e-28 UniRef50_B5JL04 LytTr DNA-binding domain family n=1 Tax=Verrucom... 126 8e-28 UniRef50_A4E9X0 Putative uncharacterized protein n=1 Tax=Collins... 125 9e-28 UniRef50_Q025Y4 Response regulator receiver protein n=1 Tax=Cand... 125 9e-28 UniRef50_A9DKT5 Two-component system regulatory protein n=1 Tax=... 125 1e-27 UniRef50_A3WHL3 Two-component response regulator n=1 Tax=Erythro... 125 1e-27 UniRef50_A1ZP21 Response regulator of the LytR/AlgR family n=1 T... 125 1e-27 UniRef50_Q26BE1 Response regulator, LytR/AlgR family n=3 Tax=Fla... 125 2e-27 UniRef50_Q21NI5 Response regulator receiver n=2 Tax=Alteromonada... 124 2e-27 UniRef50_C6PCY4 Two component transcriptional regulator, LytTR f... 124 3e-27 UniRef50_A0Z2B9 Response regulator receiver domain protein (CheY... 124 3e-27 UniRef50_Q1D286 DNA-binding response regulator n=1 Tax=Myxococcu... 124 4e-27 UniRef50_Q028U9 Response regulator receiver protein n=1 Tax=Cand... 124 4e-27 UniRef50_Q1QCQ5 Transcriptional regulator, LytR/AlgR family n=1 ... 123 4e-27 UniRef50_Q2S4J5 Response regulator n=1 Tax=Salinibacter ruber DS... 123 4e-27 UniRef50_Q0A576 Response regulator receiver protein n=1 Tax=Alka... 123 4e-27 UniRef50_Q1IJW2 Transcriptional regulator, LytR/AlgR family n=1 ... 123 5e-27 UniRef50_Q317D4 Transcriptional regulator, LytR/AlgR family n=9 ... 123 6e-27 UniRef50_A4J8Q7 Response regulator receiver protein n=1 Tax=Desu... 123 6e-27 UniRef50_C1ABW9 Two-component response regulator n=1 Tax=Gemmati... 122 7e-27 UniRef50_Q023F4 Response regulator receiver protein n=1 Tax=Cand... 122 7e-27 UniRef50_A0LZC2 Two-component system response regulator containi... 122 7e-27 UniRef50_A4BK03 Transcriptional regulator n=1 Tax=Reinekea bland... 122 9e-27 UniRef50_Q5R0R5 Response regulator of the LytR/AlgR family n=1 T... 122 1e-26 UniRef50_D2QR47 Two component transcriptional regulator, LytTR f... 122 1e-26 UniRef50_C8P5Q7 Response regulator n=2 Tax=Lactobacillaceae RepI... 122 1e-26 UniRef50_D2PNH6 Two component transcriptional regulator, LytTR f... 122 1e-26 UniRef50_B3E2Y5 Two component transcriptional regulator, LytTR f... 121 2e-26 UniRef50_B9DL71 Two-component response regulator n=2 Tax=Staphyl... 121 2e-26 UniRef50_A5FJA4 Two component transcriptional regulator, LytTR f... 120 3e-26 UniRef50_B9M2N5 Two component transcriptional regulator, LytTR f... 120 3e-26 UniRef50_C1A6M9 LytT family two-component response regulator n=1... 120 3e-26 UniRef50_A0PY89 Sensory transduction protein lytT n=3 Tax=Clostr... 120 4e-26 UniRef50_Q47XT5 Response regulator n=4 Tax=Gammaproteobacteria R... 120 5e-26 UniRef50_A6TN10 Two component transcriptional regulator, LytTR f... 119 6e-26 UniRef50_C1F8Y7 Response regulators of cell autolysis n=1 Tax=Ac... 119 7e-26 UniRef50_C6W647 Two component transcriptional regulator, LytTR f... 119 8e-26 UniRef50_C9LQT9 DNA-binding response regulator n=1 Tax=Dialister... 119 8e-26 UniRef50_B2I5K9 Two component transcriptional regulator, LytTR f... 119 8e-26 UniRef50_Q04FG9 Response regulator of the LytR/AlgR family n=2 T... 118 2e-25 UniRef50_Q3CYS0 Response regulator n=8 Tax=Streptococcus agalact... 118 2e-25 UniRef50_B9TLS0 Positive alginate biosynthesis regulatory protei... 118 2e-25 UniRef50_B1ZSR0 Two component transcriptional regulator, LytTR f... 118 2e-25 UniRef50_Q0HP79 Response regulator receiver protein n=20 Tax=Bac... 118 2e-25 UniRef50_C1A9K0 LytT family two-component response regulator n=1... 118 2e-25 UniRef50_A8VV77 Response regulator receiver protein n=1 Tax=Baci... 117 2e-25 UniRef50_Q01YJ9 Response regulator receiver protein n=1 Tax=Cand... 117 3e-25 UniRef50_Q21DS4 Response regulator receiver n=2 Tax=Alteromonada... 117 4e-25 UniRef50_Q87K77 Uncharacterized response regulatory protein VPA0... 117 4e-25 UniRef50_A7HMG0 Two component transcriptional regulator, LytTR f... 117 4e-25 UniRef50_Q025M1 Response regulator receiver protein n=1 Tax=Cand... 117 4e-25 UniRef50_A6G241 Response regulator receiver protein n=1 Tax=Ples... 117 5e-25 UniRef50_C1AAX5 LytT family two-component response regulator n=1... 116 6e-25 UniRef50_D2MJZ8 Transcriptional regulator, LytR/AlgR family n=1 ... 116 6e-25 UniRef50_B1YHS9 Two component transcriptional regulator, LytTR f... 116 8e-25 UniRef50_UPI000178918B two component transcriptional regulator, ... 115 9e-25 UniRef50_B3JKI8 Putative uncharacterized protein n=3 Tax=Bactero... 115 1e-24 UniRef50_B7IG84 Autolysin response regulator n=1 Tax=Thermosipho... 115 1e-24 UniRef50_Q182U2 Two-component response regulator n=5 Tax=Clostri... 115 1e-24 UniRef50_C0ZBJ6 Two-component response regulator n=1 Tax=Breviba... 115 1e-24 UniRef50_A3M1E2 Alginate biosynthesis regulatory protein n=20 Ta... 115 1e-24 UniRef50_A0M3D4 Two-component response regulator containing LytT... 115 1e-24 UniRef50_Q8EQQ3 Sensory transduction protein lytT n=1 Tax=Oceano... 115 2e-24 UniRef50_D2QK93 Two component transcriptional regulator, LytTR f... 114 2e-24 UniRef50_A4C6V8 Two-component system, regulatory protein n=1 Tax... 114 2e-24 UniRef50_Q097A8 Response regulator of the LytR/AlgR family n=1 T... 114 2e-24 UniRef50_A8UEA9 Two-component system response regulator n=1 Tax=... 114 2e-24 UniRef50_Q1YSU3 Two-component system regulatory protein n=1 Tax=... 114 3e-24 UniRef50_A8F4Q4 Two component transcriptional regulator, LytTR f... 114 3e-24 UniRef50_Q8DVB7 Sensory transduction protein lytR n=3 Tax=Strept... 114 3e-24 UniRef50_C1AAC5 LytT family two-component response regulator n=1... 114 4e-24 UniRef50_Q01R04 Response regulator receiver protein n=1 Tax=Cand... 113 5e-24 UniRef50_B9E9A6 Putative uncharacterized protein n=1 Tax=Macroco... 113 6e-24 UniRef50_B2V8S8 Two component transcriptional regulator, LytTR f... 113 7e-24 UniRef50_Q2SQ69 Alginate biosynthesis regulatory protein AlgR-li... 113 7e-24 UniRef50_Q0K6B3 Response regulator containing a LytTR DNA-bindin... 113 7e-24 UniRef50_B1KPY2 Two component transcriptional regulator, LytTR f... 112 1e-23 UniRef50_B5JSZ7 Response regulator receiver:LytTr DNA-binding re... 112 1e-23 UniRef50_A4E9W5 Putative uncharacterized protein n=1 Tax=Collins... 112 1e-23 UniRef50_A6LJ90 Two component transcriptional regulator, LytTR f... 111 2e-23 UniRef50_C3JDP1 Response regulator, two-component system n=4 Tax... 111 2e-23 UniRef50_Q8E7H3 Sensory transduction protein lytR n=8 Tax=Strept... 111 2e-23 UniRef50_D2QUQ7 Two component transcriptional regulator, LytTR f... 111 2e-23 UniRef50_Q4L8V4 Sensory transduction protein lytR n=60 Tax=Bacil... 110 3e-23 UniRef50_C2D9N2 Two-component response regulator n=3 Tax=Corioba... 110 4e-23 UniRef50_Q15WR1 Response regulator receiver protein n=1 Tax=Pseu... 110 5e-23 UniRef50_D2QDN3 Two component transcriptional regulator, LytTR f... 110 5e-23 UniRef50_D0LSR9 Two component transcriptional regulator, LytTR f... 109 9e-23 UniRef50_Q479S3 Transcriptional regulator, LytR/AlgR family n=3 ... 109 9e-23 UniRef50_D0IHA7 Response regulator n=1 Tax=Vibrio sp. RC586 RepI... 109 9e-23 UniRef50_D2QJ93 Two component transcriptional regulator, LytTR f... 108 1e-22 UniRef50_C8W4Q6 Two component transcriptional regulator, LytTR f... 108 1e-22 UniRef50_A1ZQ18 Transcriptional regulator protein n=1 Tax=Micros... 108 1e-22 UniRef50_A4BAR2 Alginate biosynthesis regulatory protein AlgR-li... 108 1e-22 UniRef50_A4C5W8 Two-component system response regulator protein ... 108 1e-22 UniRef50_A6GZR7 Two-component system response regulatory protein... 108 2e-22 UniRef50_A8ET22 Two-component response regulator n=1 Tax=Arcobac... 108 2e-22 UniRef50_A3J233 Response regulator n=3 Tax=Bacteroidetes RepID=A... 108 2e-22 UniRef50_A8T0B1 Two-component response regulator n=1 Tax=Vibrio ... 108 2e-22 UniRef50_C2G2I4 Response regulator n=1 Tax=Sphingobacterium spir... 107 2e-22 UniRef50_A6G9H1 LytTr DNA-binding domain family protein n=1 Tax=... 107 3e-22 UniRef50_A3UEG7 Two-component system regulatory protein n=1 Tax=... 107 3e-22 UniRef50_A6EEN3 Two-component system response regulator n=4 Tax=... 107 4e-22 UniRef50_A5G4A4 Two component transcriptional regulator, LytTR f... 107 5e-22 UniRef50_A6LDC2 Two-component system response regulator protein ... 106 6e-22 UniRef50_A1HSX1 Response regulator receiver protein n=1 Tax=Ther... 105 9e-22 UniRef50_B8KBX1 Transcriptional regulator n=4 Tax=Vibrio RepID=B... 105 1e-21 UniRef50_A5FL89 Transcriptional regulator, LytR/AlgR family n=1 ... 105 1e-21 UniRef50_C6I7A6 Two-component system response regulator n=13 Tax... 105 1e-21 UniRef50_A9U7N0 Predicted protein n=1 Tax=Physcomitrella patens ... 105 2e-21 UniRef50_C7MZZ5 Response regulator of the LytR/AlgR family n=3 T... 104 2e-21 UniRef50_A1ZFR4 Two-component system response regulator protein ... 104 2e-21 UniRef50_C6W927 Two component transcriptional regulator, LytTR f... 104 2e-21 UniRef50_Q2RI16 Transcriptional regulator, LytR/AlgR family n=1 ... 104 3e-21 UniRef50_Q47KY1 Response regulator receiver n=1 Tax=Thermobifida... 104 3e-21 UniRef50_C0Z807 Two-component response regulator n=1 Tax=Breviba... 104 3e-21 UniRef50_C0ZK91 Putative uncharacterized protein n=1 Tax=Breviba... 104 3e-21 UniRef50_B1I2Q5 Response regulator receiver protein n=1 Tax=Cand... 103 3e-21 UniRef50_A5FCC1 Two component transcriptional regulator, LytTR f... 103 4e-21 UniRef50_B0TE50 Transcriptional regulator, lytr/algr family n=2 ... 103 4e-21 UniRef50_A1ZKV0 Two-component system response regulator protein ... 103 4e-21 UniRef50_C8W4Y1 Two component transcriptional regulator, LytTR f... 103 7e-21 UniRef50_B1ZXP5 Two component transcriptional regulator, LytTR f... 102 9e-21 UniRef50_C7PE44 Two component transcriptional regulator, LytTR f... 102 9e-21 UniRef50_A5FB58 Two component transcriptional regulator, LytTR f... 102 1e-20 UniRef50_Q9KL96 Uncharacterized response regulatory protein VC_A... 102 1e-20 UniRef50_A1HTW5 Response regulator receiver protein n=1 Tax=Ther... 102 1e-20 UniRef50_C7PAR0 Two component transcriptional regulator, LytTR f... 102 1e-20 UniRef50_Q15WR3 Response regulator receiver protein n=1 Tax=Pseu... 102 1e-20 UniRef50_C8W4Z0 Two component transcriptional regulator, LytTR f... 102 1e-20 UniRef50_A6LTH8 Two component transcriptional regulator, LytTR f... 102 1e-20 UniRef50_Q12QZ1 Transcriptional regulator, LytR/AlgR family n=1 ... 101 2e-20 UniRef50_Q1VYF8 Two-component system response regulator protein ... 101 2e-20 UniRef50_C7PA86 Two component transcriptional regulator, LytTR f... 101 2e-20 UniRef50_C0A760 Response regulator receiver protein n=1 Tax=Opit... 100 4e-20 UniRef50_B1HY70 Hypothetical response regulatory protein n=1 Tax... 100 4e-20 UniRef50_A6ER53 Putative two-component system response regulator... 100 4e-20 UniRef50_B0MWM6 Putative uncharacterized protein n=2 Tax=Bactero... 100 4e-20 UniRef50_A1ZK58 Two-component system response regulator protein ... 100 4e-20 UniRef50_D2QI00 Two component transcriptional regulator, LytTR f... 100 4e-20 UniRef50_A8UH71 Response regulator n=1 Tax=Flavobacteriales bact... 100 5e-20 UniRef50_C7PII0 Two component transcriptional regulator, LytTR f... 100 7e-20 UniRef50_C6W252 Two component transcriptional regulator, LytTR f... 100 7e-20 UniRef50_C6W1D7 Two component transcriptional regulator, LytTR f... 100 7e-20 UniRef50_C5C1Z4 Two component transcriptional regulator, LytTR f... 100 8e-20 UniRef50_B0SFX2 Response regulator n=2 Tax=Leptospira biflexa se... 99 8e-20 UniRef50_B2A4G7 Two component transcriptional regulator, LytTR f... 99 9e-20 UniRef50_D0ZEJ7 Two-component system response-regulator n=3 Tax=... 99 9e-20 UniRef50_D0HCT2 Response regulator n=5 Tax=Vibrio RepID=D0HCT2_V... 99 9e-20 UniRef50_C0INH2 Two-component system response regulator protein ... 99 1e-19 UniRef50_C6XUE8 LytTr DNA-binding region n=2 Tax=Pedobacter RepI... 99 1e-19 UniRef50_Q8A855 Two-component system response regulator n=1 Tax=... 99 1e-19 UniRef50_Q2BAT6 Two-component response regulator n=1 Tax=Bacillu... 99 1e-19 UniRef50_A7T6N4 Predicted protein n=4 Tax=cellular organisms Rep... 99 2e-19 UniRef50_C6XX74 LytTr DNA-binding region n=5 Tax=Bacteroidetes R... 99 2e-19 UniRef50_A1ZI08 Two-component system response regulator n=3 Tax=... 99 2e-19 UniRef50_C4ZNN1 Two component transcriptional regulator, LytTR f... 98 2e-19 UniRef50_Q3BTS0 Two-component system regulatory protein n=2 Tax=... 98 2e-19 UniRef50_A3P4Z8 Response regulator protein, frameshift n=9 Tax=p... 98 2e-19 UniRef50_A3HT26 Two-component system response regulator n=1 Tax=... 98 3e-19 UniRef50_A4A9F6 Two-component system regulatory protein n=2 Tax=... 98 3e-19 UniRef50_B1ZNG8 Two component transcriptional regulator, LytTR f... 97 3e-19 UniRef50_A6EI22 Response regulator n=1 Tax=Pedobacter sp. BAL39 ... 97 3e-19 UniRef50_A0YAJ1 Response regulator n=1 Tax=marine gamma proteoba... 97 3e-19 UniRef50_A0LTS8 Response regulator receiver protein n=1 Tax=Acid... 97 4e-19 UniRef50_A9DIK2 Response regulator n=3 Tax=Bacteroidetes RepID=A... 97 4e-19 UniRef50_A5F9U3 Two component transcriptional regulator, LytTR f... 97 4e-19 UniRef50_C6CV51 Response regulator receiver and SARP domain prot... 97 4e-19 UniRef50_D2M2I5 Response regulator receiver and SARP domain prot... 97 4e-19 UniRef50_C6VTD2 Two component transcriptional regulator, LytTR f... 97 5e-19 UniRef50_C7PEI4 Two component transcriptional regulator, LytTR f... 97 5e-19 UniRef50_D2QPM9 Two component transcriptional regulator, LytTR f... 97 5e-19 UniRef50_A4A4S8 Two-component system, regulatory protein n=1 Tax... 97 5e-19 UniRef50_A6EH20 Response regulator n=1 Tax=Pedobacter sp. BAL39 ... 97 5e-19 UniRef50_Q2N6M0 Two-component response regulator n=7 Tax=Sphingo... 97 6e-19 UniRef50_B0RWJ0 Transcriptional regulator protein n=11 Tax=Prote... 97 6e-19 UniRef50_A5FIA9 Two component transcriptional regulator, LytTR f... 97 6e-19 UniRef50_C5PVL6 LytTR family two component transcriptional regul... 96 1e-18 >UniRef50_P0AFT7 Uncharacterized response regulatory protein yehT n=180 Tax=Proteobacteria RepID=YEHT_ECO57 Length = 239 Score = 487 bits (1253), Expect = e-136, Method: Compositional matrix adjust. Identities = 239/239 (100%), Positives = 239/239 (100%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI Sbjct: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS Sbjct: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR Sbjct: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 Query: 181 TLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL 239 TLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL Sbjct: 181 TLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL 239 >UniRef50_C6CMQ8 Two component transcriptional regulator, LytTR family n=3 Tax=Dickeya RepID=C6CMQ8_DICZE Length = 241 Score = 346 bits (888), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 160/239 (66%), Positives = 202/239 (84%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+ VLIVDDEPLAR+NLR L++ +E+VGEC+NAVE I A+H+L PDV+FLDIQMPRI Sbjct: 1 MLSVLIVDDEPLARDNLRCLLEQDDGLELVGECANAVEAISAIHRLHPDVVFLDIQMPRI 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SGLEM+GM+DP++ PYIVF+TA+DEYAIKAFEE AFDYLLKPID RL KTL L +ER Sbjct: 61 SGLEMIGMIDPDNMPYIVFITAYDEYAIKAFEEQAFDYLLKPIDPQRLAKTLRNLHRERP 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 Q++ L ++Q+ L +IPCTGHSRIYL++ +V F SR SGVYVT +G+E FTELTL+ Sbjct: 121 AQNIDTLSDHQRGLDYIPCTGHSRIYLMKSSEVQFARSRQSGVYVTGPQGEECFTELTLK 180 Query: 181 TLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL 239 TLESRTPL+RCHRQYLVN+ HL+EIRLE++GQAE++L++G +PVSRRYLK+LK+ +GL Sbjct: 181 TLESRTPLVRCHRQYLVNMDHLREIRLEESGQAEILLKSGQALPVSRRYLKTLKQLLGL 239 >UniRef50_Q8DET1 Uncharacterized response regulatory protein VV1_0503 n=56 Tax=Gammaproteobacteria RepID=Y503_VIBVU Length = 242 Score = 254 bits (649), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 121/244 (49%), Positives = 175/244 (71%), Gaps = 9/244 (3%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+ L++DDEP ARE L L E DI+++G+ +NA+ G+ +++L+PDV+FLDIQMP++ Sbjct: 1 MLTALVIDDEPFAREELTDLLSETGDIDVIGDAANAIVGLKKINELKPDVVFLDIQMPQV 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER- 119 +G+E++GM+DP+ PY+VF+TA+D+YAI+AFE++AFDYLLKP+D RL KT+ RL + Sbjct: 61 TGIELLGMMDPDTMPYVVFVTAYDQYAIQAFEDNAFDYLLKPVDPERLRKTVKRLSKAAS 120 Query: 120 ----SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFT 175 S+ SL PE L IPC GH+RI ++ + V S +SGV+V S + T Sbjct: 121 HSALSQHIASLAPET---LDQIPCIGHNRIVIMATESVECAYSDISGVHVRS-ASQTAST 176 Query: 176 ELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKE 235 +LTL+ LE +T L+RCHRQYL+++ + EI+L +NG AE+I + G VPVSRRYLK LKE Sbjct: 177 QLTLKVLEEKTSLVRCHRQYLISIKAISEIKLLENGLAEIITKTGFEVPVSRRYLKLLKE 236 Query: 236 AIGL 239 +GL Sbjct: 237 MLGL 240 >UniRef50_Q8EDD7 Uncharacterized response regulatory protein SO_2823 n=18 Tax=Shewanella RepID=Y2823_SHEON Length = 236 Score = 247 bits (630), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 124/239 (51%), Positives = 173/239 (72%), Gaps = 4/239 (1%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI LIVDDE ARE L L +++DIEI+G+CSNA+E + + K +P ++FLDIQMPRI Sbjct: 1 MITCLIVDDELFAREELADSLSQEADIEIIGQCSNAIEALQTITKEKPQLVFLDIQMPRI 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SG+E++ MLDP+ P IVF+TAFDE+A+KAF+ HAFDYLLKPID RL KTL R+R++ + Sbjct: 61 SGMELIAMLDPDTLPKIVFVTAFDEFAVKAFDNHAFDYLLKPIDADRLSKTLKRVRKDLT 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 Q V+L+ ++L+ +PC S++ ++ ++DV +V S +SG++V +GK T+LTL+ Sbjct: 121 PQAVNLI--APRSLEHLPCYSGSKLKVIPIQDVEYVFSDLSGIHVACTKGK-VHTQLTLK 177 Query: 181 TLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL 239 LE +TPL+ CHRQYL++ + EI L D G AE+ G VPVSRRYLKSLK+ G Sbjct: 178 VLEEKTPLVHCHRQYLISPKAIAEIELLDTG-AEVTTLLGDKVPVSRRYLKSLKQLFGF 235 >UniRef50_B6R920 Response regulator receiver protein n=2 Tax=Proteobacteria RepID=B6R920_9RHOB Length = 236 Score = 245 bits (625), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 127/239 (53%), Positives = 171/239 (71%), Gaps = 6/239 (2%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI LIVDDEP ARE L+ L + DIE+ GECSNA++ +G ++K +P ++FLDIQMPRI Sbjct: 1 MISCLIVDDEPYAREELKDLLSKADDIEVTGECSNAIDALGFINKHKPQLVFLDIQMPRI 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SG+EM+GMLDPE P IVF TA+DEYAIKAFE HAFDYLLKPI+E RL KTL+R+R + Sbjct: 61 SGMEMIGMLDPETMPRIVFSTAYDEYAIKAFEHHAFDYLLKPIEEERLAKTLSRVRSDLR 120 Query: 121 KQDV-SLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 Q + ++P Q L+ +PC +++ ++ + V +V S +SG++V + E T LTL Sbjct: 121 PQLMEEIIP---QELQHLPCYLGNKLKVVPVHAVEYVFSDLSGIHVATAECY-VHTHLTL 176 Query: 180 RTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIG 238 + LE RT L RCHRQYLV+ + EI L++ G AE++ +G +PVSRRYLKSLK+ G Sbjct: 177 KVLEQRTSLARCHRQYLVSPDAISEIVLQETG-AEVVTHSGTKIPVSRRYLKSLKQHFG 234 >UniRef50_A7HAA1 Two component transcriptional regulator, LytTR family n=2 Tax=Deltaproteobacteria RepID=A7HAA1_ANADF Length = 236 Score = 216 bits (550), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 113/239 (47%), Positives = 154/239 (64%), Gaps = 3/239 (1%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M++ LIVDDEP AR LR L++ +EI GEC NAVE + AV + RPDVLFLD+QMP + Sbjct: 1 MMRALIVDDEPGARAELRALLEQTGAVEIAGECPNAVEALNAVQRERPDVLFLDVQMPVV 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G E++ MLD + P +VF+TA D +A++AFEE A DYLLKP+ RL KT+ +L + S Sbjct: 61 NGFELLAMLDEDVLPAVVFVTAHDAFALRAFEESAADYLLKPVTRERLAKTVEKLARRTS 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 +P L +PC I L+ + +V V S +GVYV + G E T+LTLR Sbjct: 121 PAPRPTVP--APPLTRVPCLAGKAIKLVPLAEVDHVRSSAAGVYVVTAAG-EFLTDLTLR 177 Query: 181 TLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL 239 LE R L+RCH+Q+LVNL + EIR ++ A + R G VPVSRR+L +L+E +GL Sbjct: 178 VLEERGGLVRCHKQHLVNLERIDEIRPGEDPAATVRTRAGHLVPVSRRFLAALRERLGL 236 >UniRef50_B8JGA2 Two component transcriptional regulator, LytTR family n=5 Tax=Proteobacteria RepID=B8JGA2_ANAD2 Length = 239 Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 106/242 (43%), Positives = 146/242 (60%), Gaps = 6/242 (2%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M++ +IVDDEP AR LR LQ ++EI +C NAVE + AV + RPDVLFLD+QMP + Sbjct: 1 MMRAVIVDDEPNARAELRALLQATGEVEIAADCGNAVEALQAVRRERPDVLFLDVQMPVV 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G E++GMLDP+ P +VF+TA D +A++AFEE A DYLLKP+ A + R Sbjct: 61 DGFELLGMLDPDDLPAVVFVTAHDAFALRAFEESAADYLLKPV--APDRLRRSLERLRAR 118 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 P L +PC + L+ + ++ V S +GV+V + +G E FTELTL+ Sbjct: 119 AGVARAAPPLAPPLTRVPCLAGRAVKLVPLAEIELVRSGPAGVHVVTAQG-ELFTELTLK 177 Query: 181 TLESRTPLLRCHRQYLVNLAHLQEIR---LEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 LE R LLRCH+Q+LVN + EIR D G A + R G VPVSRR+L ++ + Sbjct: 178 VLEERGGLLRCHKQHLVNADRVDEIRPGDASDPGAAVIRTRGGHDVPVSRRHLAQVRARL 237 Query: 238 GL 239 G+ Sbjct: 238 GI 239 >UniRef50_Q2S5X7 Alginate biosynthesis regulatory protein n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S5X7_SALRD Length = 252 Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 98/250 (39%), Positives = 147/250 (58%), Gaps = 14/250 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 ++ L+VDDEPLARE LR L E D+E+V E E + +H P V+FLD+QMP + Sbjct: 3 MRCLVVDDEPLARERLRALLDEADEDVEVVAEAEGGKEAVSLIHDREPSVVFLDVQMPVL 62 Query: 61 SGLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR--- 116 G ++V +L +P RP+IVF+TA+DEYAI+AFE A DYL KP+ RL KTL R++ Sbjct: 63 GGFDVVDLLPEPGQRPHIVFVTAYDEYAIQAFEARALDYLTKPVRLERLNKTLGRVQDAL 122 Query: 117 ---QERSKQDVSLLPENQ--QALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGK 171 R ++++ L +++ QALK + R+ ++ +++V ++ + V+ + EG Sbjct: 123 ANDDAREQENLDDLRDSRQDQALKRLTVHVGHRLRVVPLEEVRWIEADEGFVFAHT-EGG 181 Query: 172 EGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRR 228 T+ TL LESR P +R HR +VNL E+ E G A L L++G V V+RR Sbjct: 182 RYRTDFTLEELESRLPPTRFVRVHRSTIVNLDAAYELVPEPAGTATLRLQDGTEVKVARR 241 Query: 229 YLKSLKEAIG 238 ++ AIG Sbjct: 242 RTDDVRSAIG 251 >UniRef50_Q2RYN6 Two-component system response regulator protein n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RYN6_SALRD Length = 322 Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 95/257 (36%), Positives = 145/257 (56%), Gaps = 22/257 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ LIVDDEPLAR +R ++ D+ I+GE ++ E + + PD++FLD+QMP +S Sbjct: 68 IRALIVDDEPLARTGVRQLVEPLDDVTILGEATDGDEAVRQIEAQAPDLVFLDVQMPEMS 127 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GLE+V + E P +F+TA+D+YA+ AFE HA DYLLKPI+E R E+ + R RQ+ + Sbjct: 128 GLEVVREVGVEAMPLTIFVTAYDQYALDAFEAHALDYLLKPIEEDRFEEAMERARQQLRQ 187 Query: 122 QDVSLLPEN-QQALKFIPCTGHS------------RIYLLQMKDVAFVSSRMSGVYVTSH 168 + L E + L+ G + RIY + +DV ++ S G YV H Sbjct: 188 VEADTLNEQLRGVLREYADAGETGGIERFTIRSRDRIYFVDAEDVQWIES--EGDYVALH 245 Query: 169 EGKEG-FTELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVP 224 +G + T++ LE + LR HR Y+VN+ H+ E+R D+G +L + NG + Sbjct: 246 DGDDAHLVRKTMKKLEEQLDPDQFLRVHRSYIVNVEHIDELRPLDHGTYQLRMANGTPLK 305 Query: 225 VSRRY---LKSLKEAIG 238 SR Y + +L +A G Sbjct: 306 TSRGYSDNIDALLDATG 322 >UniRef50_C6XTW9 LytTr DNA-binding region n=3 Tax=Sphingobacteriales RepID=C6XTW9_PEDHD Length = 245 Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 92/250 (36%), Positives = 149/250 (59%), Gaps = 16/250 (6%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI+ +++DDEPLAR+ ++ +L+ ++E+V ECS+ EGI A+ +PD +FLDIQMP+I Sbjct: 1 MIRTILIDDEPLARDVVKHYLKLFPEVEVVAECSDGFEGIKAIAHHQPDFIFLDIQMPKI 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL----- 115 SG EM+ ++ E P ++F TAFDEYAIKAFE +A DYLLKPI++ R E+ + +L Sbjct: 61 SGFEMLELV--EKHPAVIFTTAFDEYAIKAFEVNAVDYLLKPIEQNRFEQAMQKLPGRLH 118 Query: 116 -RQERSKQ--DVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEG-- 170 +K+ DV+ L Q + G I ++ + D+ ++ + V +++ EG Sbjct: 119 NTDAVTKELLDVAALSPAQHNRVVVKKNG--VIKIIAVSDIHYLEADDDYVKLSTAEGIY 176 Query: 171 -KEGFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRY 229 K RTLE +R HR Y++NLA + I L++ ++L++ + +PVS+ Sbjct: 177 HKNKTMNFFERTLEPGQ-FIRIHRSYIINLAQVTRIELKEKDSYVVLLKSDIWLPVSKTG 235 Query: 230 LKSLKEAIGL 239 LK A+G+ Sbjct: 236 YVKLKAALGM 245 >UniRef50_A1ZD68 LytTr DNA-binding response regulator n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZD68_9SPHI Length = 254 Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 90/253 (35%), Positives = 142/253 (56%), Gaps = 17/253 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IK LIVDDE LAR+ L +FLQE+ D EIVG+CSN +E + + PD+LFLD+QMP + Sbjct: 4 IKTLIVDDEALARDKLAIFLQEEEDFEIVGQCSNGIEALQLLRDSYPDLLFLDVQMPEMD 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE--- 118 G+E++ +D + P I+ +TA+D YA++AFE HA DYLLKP D R T+ R++++ Sbjct: 64 GMELLRNIDVQKIPCIILVTAYDNYALQAFEYHALDYLLKPFDRERFLMTIKRVKEQMLL 123 Query: 119 -----RSKQDVSLLPEN---QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEG 170 Q ++ L ++ ++ L+ I +I+ ++ KDV +V S +G Y+ H G Sbjct: 124 HSQGNHQTQLLTYLKDSLPKEKYLEKIVVKDGGKIFFVKTKDVEWVES--AGNYLKLHIG 181 Query: 171 KE-GFTELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVS 226 K T+ E + +R HR LVN+ + + N + + L +G V Sbjct: 182 KSMHLIRETMNAFEQKLNPQEFVRVHRSSLVNIEAIHHLESWGNTEFTITLSSGYQVQSG 241 Query: 227 RRYLKSLKEAIGL 239 R Y S+++ + L Sbjct: 242 RSYYSSIRQKLQL 254 >UniRef50_C9RRP4 Two component transcriptional regulator, LytTR family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RRP4_FIBSS Length = 254 Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 93/255 (36%), Positives = 143/255 (56%), Gaps = 24/255 (9%) Query: 1 MIKVLIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 M LI DDEPLAR +R L+ S+IEI+GE S+ + I +H+L PD++FLDIQMP Sbjct: 1 MFTALIADDEPLARVRMRSLLEAYSSEIEILGEASSGAQTIQKIHELDPDIVFLDIQMPD 60 Query: 60 ISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 + E++ L+ + P IVF TA+D +A++A+EE+ DYLLKPID RL+ T+ +LR+ Sbjct: 61 MDAFEVLKSLNEDDIPLIVFTTAYDNFALRAYEENVVDYLLKPIDPERLQATMGKLRKRM 120 Query: 120 SKQDVSLLPENQQALKFIPCTGHS-------------RIYLLQMKDVAFVSS--RMSGVY 164 ++ +P + KF S RI L+ M +V S + + Y Sbjct: 121 PHEEGLGVPADFSWDKFKELMSSSGLYMQRLQVKQSDRILLVNMDEVIRFQSEEKYTTAY 180 Query: 165 VTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILR--N 219 T+ + +LTL LE+R +R HR +LV + ++ EIR D G+ ++LR N Sbjct: 181 TTT---SQYIIDLTLVKLETRLDPRQFVRVHRAHLVAIDYIAEIRKNDAGRLCIVLRDKN 237 Query: 220 GLTVPVSRRYLKSLK 234 + VSR ++K++K Sbjct: 238 RTQITVSRNFVKTVK 252 >UniRef50_C7PBU1 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PBU1_CHIPD Length = 257 Score = 149 bits (376), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 91/248 (36%), Positives = 146/248 (58%), Gaps = 19/248 (7%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 ++ L+VDDE +A L+ LQ I+IVGE + + +++LRP+++FLDI+MP Sbjct: 9 IVTTLLVDDEVIAIHRLKKALQVYPQIKIVGEAMDGAAAVELINRLRPELVFLDIRMPGF 68 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G E++ L + P IVF+TA++EYAI+AFE+++ DYLLKP++E RLE T+ R+RQ R Sbjct: 69 NGFEVLDRLT--YMPMIVFVTAYEEYAIRAFEKNSLDYLLKPVEEERLEMTINRIRQ-RP 125 Query: 121 KQDVSLLP---------ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSH-EG 170 KQ+ LL +++ + IP +I+L+ ++DV + +R YV H EG Sbjct: 126 KQETELLSRIKMLLGEQQSEPRISTIPVRSGDKIFLVHVQDVVLLEAREK--YVVVHTEG 183 Query: 171 KEGFTELTLRTLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELIL--RNGLTVPVS 226 +E + +L LE R P +R HR Y+VN ++EI+ G L++ R G V + Sbjct: 184 EEQLIDYSLSYLEGRLPETFVRVHRSYIVNKLKIREIQKYFKGTFMLLMNDRKGSKVKTA 243 Query: 227 RRYLKSLK 234 Y ++K Sbjct: 244 ASYNDTIK 251 >UniRef50_C5RQ54 Two component transcriptional regulator, LytTR family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RQ54_CLOCL Length = 253 Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 89/253 (35%), Positives = 140/253 (55%), Gaps = 15/253 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++V++VDDE + NL+ +L ++ DIEI+G +++E I + +PD +FLDI MP I Sbjct: 1 MRVILVDDELASLNNLKYYLSKEEDIEIIGMYQDSLEAIKKIITDKPDAVFLDISMPEID 60 Query: 62 GLEMVG-MLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GL +L + IVF+TA+D+YAIKAFE A DY+LKPID R++ T+ RL + Sbjct: 61 GLSCAAEILSHDEEMKIVFVTAYDDYAIKAFELSAIDYILKPIDPQRIKATIKRLSKFSV 120 Query: 121 KQDVS-LLPENQ----QALKF----IPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGK 171 Q +NQ +A+K +P + RI+L ++D++F+ S V + + +GK Sbjct: 121 DQTTKEKFKKNQFIKEKAMKTNISKLPLWENDRIFLCDIEDISFIFSECGYVKINTCKGK 180 Query: 172 EGFTELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELIL--RNGLTVPVS 226 ++ TL E R RCH+ ++VN + EI N +LI+ + + VS Sbjct: 181 TYTSKETLNYYEDRLNELSFFRCHKSFIVNTKKIAEIIPWFNSTFKLIMDGDSNSDITVS 240 Query: 227 RRYLKSLKEAIGL 239 R Y+ S K GL Sbjct: 241 RSYMTSFKSLFGL 253 >UniRef50_C7PM85 Two component transcriptional regulator, LytTR family n=3 Tax=Sphingobacteriales RepID=C7PM85_CHIPD Length = 246 Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 84/255 (32%), Positives = 144/255 (56%), Gaps = 25/255 (9%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MIK +I+DDEPLARE ++ +LQ S I+++ EC + EG+ A+ + +PD++FLD+QMP+I Sbjct: 1 MIKAVIIDDEPLAREIVKEYLQSFSQIQLMQECGDGFEGLKAIQQQQPDIIFLDVQMPKI 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G EM+ ++ E P ++F TAF+E+AI+AFE +A DYLLKP + R +K +++ R Sbjct: 61 NGFEMLELV--ESLPAVIFTTAFEEHAIRAFEVNAIDYLLKPFSKERFDKAVSKWLDRR- 117 Query: 121 KQDVSLLPENQQALKFIPCTGHS-------------RIYLLQMKDVAFVSSRMSGVYVTS 167 + E QQ + G S +I ++ ++D+ ++ + V + + Sbjct: 118 -----VADEMQQTAALLDTAGASPMQSNRVVVKINGKIKIIPVQDIHYLEAADDYVKIVT 172 Query: 168 HEG---KEGFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVP 224 EG K + ++L+ + R HR Y++N+ + I + IL++G VP Sbjct: 173 PEGTFLKNKTMQFFEKSLDPQQ-FARVHRSYMLNVNQVTRIEPYEKENHLAILKSGAKVP 231 Query: 225 VSRRYLKSLKEAIGL 239 VS+ LK ++GL Sbjct: 232 VSKTGYPRLKASLGL 246 >UniRef50_Q82Z76 Sensory transduction protein lytT n=22 Tax=Enterococcus faecalis RepID=LYTT_ENTFA Length = 242 Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 86/242 (35%), Positives = 133/242 (54%), Gaps = 9/242 (3%) Query: 4 VLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGL 63 VLIVDDEPLARE L + + + V E + E + + +PD+LFLDI + SG Sbjct: 3 VLIVDDEPLAREELSYLVSQHPQVTSVAEADSVAEAMEEMMDQKPDLLFLDIHLTDESGF 62 Query: 64 EMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSKQ 122 ++ L + PY+VF TA+D+YA+KAF+ +A DY+LKP +E ++ + + + +E + Sbjct: 63 DLAEKLTHLKKAPYLVFATAYDQYALKAFQVNAKDYILKPFEEEKITQVIEKASKEMGQA 122 Query: 123 DVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVS--SRMSGVYVTSHEGKEGFTELTLR 180 E + IP G RIYL+ +D+ VS R ++V K TL Sbjct: 123 VPENTAEKGPKSEAIPIQGEDRIYLVAPEDIYLVSVEERQLSIFVDQQVYK---MTGTLN 179 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 ++E + P ++ HR +++N +QEI+ N ++IL NG VPVSR Y+K KE + Sbjct: 180 SIEQKLPATLFIKTHRSFILNRTKIQEIQPWFNNTLQVILTNGSKVPVSRSYVKEFKEKL 239 Query: 238 GL 239 GL Sbjct: 240 GL 241 >UniRef50_B8KHY1 Response regulator n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KHY1_9GAMM Length = 262 Score = 146 bits (369), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 92/260 (35%), Positives = 141/260 (54%), Gaps = 29/260 (11%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++VLIVDDEPLAR+ L L+ ++E+VG S+ E + + RPDVL LDI+MP ++ Sbjct: 1 MRVLIVDDEPLARDLLLEHLKANPEVEVVGAASSGREALVFIRSHRPDVLLLDIEMPGMN 60 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR---- 116 G +V L +H P ++F+TAFD YA+ AF+++A DY+LKP+D ARL+K L R R Sbjct: 61 GFALVESLQADDHMPLVIFVTAFDRYAVDAFDKNAVDYILKPVDGARLQKALLRARGRLL 120 Query: 117 ---------------QERSKQDVSL---LPENQQALKFIPCTGHSRIYLLQMKDVAFVSS 158 Q+ ++ +S+ L A+ +P + LL++ D+ +V + Sbjct: 121 DGSKAKLLRAITAVGQQPGREALSVAEALDSYSDAVGRLPVRQGDSVQLLELDDIEWVDA 180 Query: 159 RMSGVYVTSHEGKEGFT-ELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAE 214 +G Y+ H G E + T++ L R P R HR LVNL +QEI G+ Sbjct: 181 --AGDYMCVHAGGETYILRCTMKQLSDRLSLGPFARIHRSTLVNLNKIQEITPLSKGECL 238 Query: 215 LILRNGLTVPVSRRYLKSLK 234 L L N + VSR Y +++ Sbjct: 239 LHLGNDTRLKVSRNYRSAIQ 258 >UniRef50_C6W416 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W416_DYAFD Length = 257 Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 85/250 (34%), Positives = 140/250 (56%), Gaps = 15/250 (6%) Query: 3 KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 + LI+DDE LAR+ +R F+Q IEI E +N E + + + RPDV+FLDIQMP + G Sbjct: 4 RCLIIDDEVLARDVIRTFVQHDHSIEITDEAANGSEAVVKILQHRPDVVFLDIQMPELDG 63 Query: 63 LEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ---ER 119 ++ + P H+P++VF TAFD+YA++AFE +A DYLLKP DE R ++L RL++ ++ Sbjct: 64 FAVLREVWPHHQPFVVFTTAFDQYALRAFEVNAIDYLLKPFDEIRFHQSLGRLKERLSQK 123 Query: 120 SKQDVSLLPEN---------QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEG 170 S+ + L N + L+ + ++YL++ D+ S+ + + V + + Sbjct: 124 SQPRIEELVNNLLREQKDKEENYLQRLLVKEAGKMYLVKTDDITHFSADGNYISVYTLQK 183 Query: 171 KEGFTELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSR 227 K +L +LESR ++R R +VN+ + E+ NG+ + L G V +R Sbjct: 184 KVYTVYESLGSLESRLDPAVMIRVGRSNIVNMNFISELETYFNGEYIIHLSTGEKVKWTR 243 Query: 228 RYLKSLKEAI 237 Y ++K I Sbjct: 244 GYRDNIKAFI 253 >UniRef50_A1HLU8 Response regulator receiver protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HLU8_9FIRM Length = 249 Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 89/249 (35%), Positives = 144/249 (57%), Gaps = 17/249 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +KVLIVDDE + L+ L+EQ E+VG C N + + V ++PD +FLD++MP +S Sbjct: 3 LKVLIVDDEEIMCRELKYLLEEQGAAEVVGVCYNGEDALAMVGSVKPDAVFLDVRMPGLS 62 Query: 62 GLEMVGML----DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ 117 GLE+ L DP P++VF+TAF E+A++AFE +A Y+LKP DE +EK + RL + Sbjct: 63 GLEVARRLSSLKDP---PHVVFITAFSEFAVEAFEVNALHYILKPFDEQDIEKVIERLMR 119 Query: 118 ER---SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF 174 R S + +LP+ Q L+ + G R+ ++ ++ + + ++ VY+ + +G + Sbjct: 120 RRHAASGVEPEMLPKAPQHLRKLCVEGRDRLEVIDVERIQVIFAKNRMVYIQTVDGTKYA 179 Query: 175 TELTLR----TLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELIL--RNGLTVPVSRR 228 + TL+ L+SR RCHR Y+VN+ ++++ + L L + + VPV R Sbjct: 180 AKHTLQEYEEILDSRQ-FFRCHRNYIVNVDRIKQLATWFHRGYMLTLEGKEEVEVPVGRI 238 Query: 229 YLKSLKEAI 237 Y K LKE I Sbjct: 239 YAKKLKEYI 247 >UniRef50_A6LQW3 Two component transcriptional regulator, LytTR family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LQW3_CLOB8 Length = 252 Score = 144 bits (363), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 83/248 (33%), Positives = 143/248 (57%), Gaps = 12/248 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IKV IV+DE ++ + L+ + + ++VG+ + + + + PD+ F+DI +P + Sbjct: 7 IKVAIVEDEAISSDELKYIISKDGRFKVVGQAYDGISALTLIESEEPDIAFIDINIPGKN 66 Query: 62 GLEMVGMLDPEHRPYIV--FLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKT----LARL 115 G+++ + E P I+ FLTA+D YAI+AFE +DY+LKP DE R+E++ L + Sbjct: 67 GIKLAEDV-KEIFPDIILIFLTAYDTYAIRAFELKVYDYILKPYDEKRIEESLNCALNTI 125 Query: 116 RQERSKQDVSLLP--ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 + +++L EN+QALK IPC + +I L+ + ++F S YV +++ Sbjct: 126 SNRNENEIINILSKLENKQALKKIPCENNGKIILIDVNKISFFYSEGERNYVKTNKDIYC 185 Query: 174 FTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT--VPVSRRYLK 231 T+ TL+ L +T RCHR Y+VNL ++E+ NG +LI+ + +PVSR ++K Sbjct: 186 TTK-TLQELTEKTNFFRCHRSYVVNLEKVKEVYPWFNGTYKLIIDDDENNEIPVSRSHVK 244 Query: 232 SLKEAIGL 239 +K +GL Sbjct: 245 EIKIILGL 252 >UniRef50_Q484G6 LytTr DNA-binding response regulator n=1 Tax=Colwellia psychrerythraea 34H RepID=Q484G6_COLP3 Length = 260 Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 90/248 (36%), Positives = 137/248 (55%), Gaps = 13/248 (5%) Query: 3 KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 KVL+VDDEP AR+ L FL+E SD ++V E N VE + + K P ++FLDIQMP++ G Sbjct: 12 KVLVVDDEPAARQKLIHFLKEHSDFDVVAEARNGVEALECIDKFTPSLVFLDIQMPKLDG 71 Query: 63 LEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ---ER 119 + + L+ IVF+T F+EYAI AFE +A DYLLKP D+ARL KTL R R+ Sbjct: 72 ISVASNLEFNKEVSIVFVTGFNEYAISAFELNAVDYLLKPYDKARLAKTLNRFREFSGTT 131 Query: 120 SKQDVSLLPENQQALKFIPCT----GHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF- 174 K D+ L ++ + + P T I + + +V ++ S SG YV + F Sbjct: 132 QKFDIPKLVQDYRTDQHYPKTLLFKAEGSIEVAKADEVQWIES--SGNYVKICLERTAFI 189 Query: 175 TELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLK 231 TL ++S+ T +R HR +++N+ + ++ G L LR+G + +SR Y + Sbjct: 190 ARQTLTGVQSQLDPTIFVRIHRSHVININEVIQVTPISKGDHTLQLRSGTELRLSRAYQE 249 Query: 232 SLKEAIGL 239 + + L Sbjct: 250 NFFKVFNL 257 >UniRef50_D0XXI4 Two component transcriptional regulator, LytTR family n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XXI4_9CAUL Length = 262 Score = 142 bits (358), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 79/244 (32%), Positives = 133/244 (54%), Gaps = 13/244 (5%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MIK LIVDDEPLAR ++ L+ +SD E+VGE ++ I + +PDV+FLD+QMP + Sbjct: 1 MIKTLIVDDEPLARRHIAALLRARSDFEVVGEAAHGASAIAQIEAAKPDVVFLDVQMPEV 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G ++V + E P VF+TA D +A++AFE A DYLLKP + R + L R+R+ + Sbjct: 61 TGFDVVEAIGVEAMPMTVFVTAHDAFAVRAFEVQAIDYLLKPFGDDRFAQVLDRVRRRLA 120 Query: 121 KQD------VSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG- 173 +LL + + + G+ ++ ++DV ++ + +G Y H Sbjct: 121 AGHGGADALATLLASAPRTPRLV-ARGNGVARIIPLEDVQWIGA--AGNYAEVHTASRSL 177 Query: 174 FTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYL 230 + ++ +L +R P R HR +V L + E+R +G L +G + +SRRY Sbjct: 178 LIDESIASLAARLPAQDFARIHRAVIVRLDAIAEVRGGSHGDGAARLTSGAELRISRRYR 237 Query: 231 KSLK 234 ++++ Sbjct: 238 EAVQ 241 >UniRef50_Q2RH27 Transcriptional regulator, LytR/AlgR family n=2 Tax=Clostridia RepID=Q2RH27_MOOTA Length = 255 Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 88/251 (35%), Positives = 139/251 (55%), Gaps = 16/251 (6%) Query: 4 VLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGL 63 ++VDD+PLAR+ L+ L + +++GE + E + V +L PDV+FLDI+M +SG Sbjct: 5 AVVVDDQPLARDELKYLLSAYEECQVIGEAEDGGEALQLVARLHPDVVFLDIEMRGMSGY 64 Query: 64 EMV-GMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSKQ 122 + ML P IVF TA++EYA+ AFE A DYLLKP + RL KT+ R++ +++Q Sbjct: 65 DAARKMLAEPKPPLIVFATAYNEYAVGAFELGAIDYLLKPFVDERLAKTIERIKNLKARQ 124 Query: 123 D---------VSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 + LL +NQQ++K +P + I LL D+ + +R GV V + + Sbjct: 125 EDWQEAVARVARLLEDNQQSVKKLPVEKNGAIKLLDYGDIFYGRARGGGVQVFTTDDSYT 184 Query: 174 FTELTLRTLE---SRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELIL--RNGLTVPVSRR 228 F+ T+ LE +R R H+ +LVNL ++ + G L++ R +PVS+ Sbjct: 185 FSG-TMAELEERLNREGFFRVHKSFLVNLRKVEGVLPWFKGTYWLVMGDRKRTQIPVSKG 243 Query: 229 YLKSLKEAIGL 239 +K LK +GL Sbjct: 244 QVKELKVLLGL 254 >UniRef50_Q1ILF8 Transcriptional regulator, LytR/AlgR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1ILF8_ACIBL Length = 258 Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 84/255 (32%), Positives = 139/255 (54%), Gaps = 22/255 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ LIVDDEPLAR + LQ +I+GEC N + + +L+PD++FLD+QMP++ Sbjct: 3 IRTLIVDDEPLARRRILSLLQPDPSFDILGECGNGKDAADKICELKPDLVFLDVQMPKLD 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ---- 117 G ++ + H P I+F+TAFD+YA+KAF+ HA DYLLKP + R + R + Sbjct: 63 GFGVLEAVATTHLPQIIFVTAFDQYAVKAFDAHAVDYLLKPFKQERFMDAVLRAKAQFQQ 122 Query: 118 ----------ERSKQDVSLLPE-NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT 166 E + + +SLL N + + + +G ++ L+ +V ++ + + Y+ Sbjct: 123 AAAPVNGNAPEENNKLLSLLRHVNTDSDRLVVRSG-GKVVFLRASEVEWIEA--AANYIK 179 Query: 167 SHEGKEGFT-ELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT 222 + + FT + +LE P +R HR +VNL+ +QEI+ G+ +ILRNG Sbjct: 180 LYSQQRVFTVREKISSLEEALPNGKFMRIHRSVIVNLSMVQEIQPCGGGEFVVILRNGRE 239 Query: 223 VPVSRRYLKSLKEAI 237 +P+ R Y + E + Sbjct: 240 LPLGRTYRSKIDELV 254 >UniRef50_B7R6J5 LytTr DNA-binding domain family protein n=2 Tax=Thermoanaerobacteraceae RepID=B7R6J5_9THEO Length = 248 Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 87/248 (35%), Positives = 135/248 (54%), Gaps = 20/248 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ LI++DE ARE L+ LQE DIE+VGE N + G+ + KL+PDV+FLDI +P+I Sbjct: 7 LRALIIEDEQPAREELKYLLQEYEDIEVVGEADNGITGLHLIEKLKPDVIFLDINIPKIH 66 Query: 62 GLEMVGMLDPEHR----PYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ 117 G E+ + P++VF+TA+D +AI AFE DYLLKPI RL KTL ++R Sbjct: 67 GCELARHISAVSEIGKPPFVVFVTAYDIHAIDAFEIGVVDYLLKPISHHRLYKTLEKIR- 125 Query: 118 ERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFT-E 176 SL E + + + + RI LL ++++ F + V + + E F + Sbjct: 126 -------SLYKETEIPIGKLAVEKNERIKLLDLEEIVFAEAHEGNVLINTK--NETFIYK 176 Query: 177 LTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG--LTVPVSRRYLK 231 T+++LE + R + Y+VNL + EI G L++ + +PVS+ +K Sbjct: 177 GTIKSLEEKLKDRGFFRVQKSYIVNLNKIAEILPWFKGTYWLVMEDNKKTQIPVSKSQIK 236 Query: 232 SLKEAIGL 239 LK +GL Sbjct: 237 ELKALLGL 244 >UniRef50_B1HWP9 Sensory transduction protein n=2 Tax=Bacillaceae RepID=B1HWP9_LYSSC Length = 247 Score = 140 bits (353), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 85/246 (34%), Positives = 140/246 (56%), Gaps = 9/246 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + V IVDDEPLAR LR L++ + + I GE + E + D LFLDI++ + Sbjct: 1 MNVYIVDDEPLARAELRYLLEQTALVNICGESESLDEFYHTTQYEQVDCLFLDIELGMNN 60 Query: 62 GLEMVG-MLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GL++ +L E +P I+F TAFDEYA++AFE +AFDY+LKP + R++ + +L +R Sbjct: 61 GLDLAKQLLLHEQKPEIIFATAFDEYALQAFEVNAFDYILKPFEAQRVQAAVEKLVAKRR 120 Query: 121 KQDVSLLPENQQA----LKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTE 176 V + E + + L + + RI L++++D+ + +S S V + +G+ F Sbjct: 121 AAQVKTIEEIKVSQLDKLDKLTVYVNDRILLMKIQDILYCTSEDSKTVVVTEQGR-FFAS 179 Query: 177 LTLRTLESRTPL---LRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSL 233 +L LE + L +R HR ++VNL H+ E+ + + LIL N ++PVSR Y+K + Sbjct: 180 ESLAALEKKLTLKGFVRVHRAFIVNLEHIVELEPWSSSKYNLILYNRHSIPVSRLYMKDV 239 Query: 234 KEAIGL 239 ++ L Sbjct: 240 RKIFDL 245 >UniRef50_B5JNB1 LytTr DNA-binding domain family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JNB1_9BACT Length = 253 Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 87/247 (35%), Positives = 134/247 (54%), Gaps = 15/247 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K+LIVDDEP AR L++FL + + E +N E + + PD+ FLDIQMP ++ Sbjct: 5 LKILIVDDEPPARAKLKLFLSDCLPDATLYEAANGTEALELLESAAPDLAFLDIQMPGMT 64 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE--- 118 GLE+V PE P ++F TA+D+YA+KAFE +A DYLLKP D+ R K L + + Sbjct: 65 GLEVVEAFGPEEMPPLIFTTAYDQYAVKAFEHNAVDYLLKPFDDRRFRKALDKATSKLVP 124 Query: 119 RSKQDVSLLP------ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSH-EGK 171 D +LL + L+ I + RI + + D+ ++ + YV H Sbjct: 125 SPTLDSALLTQLAASIQQPSYLERIMVRENDRIIPILVSDIHWLEA--DDKYVRIHLSTS 182 Query: 172 EGFTELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRR 228 + + T+ LE R +R HR +VNL +QE+ +G ++ L++G T+P+SRR Sbjct: 183 KRYIRNTISNLEKRLDTKNFVRTHRSTIVNLDQIQELESLTHGDYQIRLKSGTTLPLSRR 242 Query: 229 YLKSLKE 235 Y LK+ Sbjct: 243 YADHLKD 249 >UniRef50_C6PV14 Two component transcriptional regulator, LytTR family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PV14_9CLOT Length = 256 Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 84/256 (32%), Positives = 144/256 (56%), Gaps = 21/256 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IK +I++DE A E L+ L + I++VG + + G+ + +P+ F+DI MP + Sbjct: 4 IKCVILEDEIPAAEELKYILSQHELIDVVGIGYDGMSGLELIKNKKPEAAFMDINMPLQN 63 Query: 62 GLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+E+ + + + I+F+TA++E+A++AFE +A DY+LKP DE R+E T+ RL + Sbjct: 64 GMELAKKVREFDENIDIIFVTAYEEHAVQAFEVNALDYILKPFDEKRIEITIKRLASKFK 123 Query: 121 KQ--DVSLLP-----------ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTS 167 + D LP + ++ +K IPC + +I L+ +KD+ + + YV + Sbjct: 124 NKTIDEEKLPDIINDIINKIDKEERIVKKIPCEKNGKIVLVNIKDIYYCYIKDEKTYVKA 183 Query: 168 HEGKE--GFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELIL--RNGLTV 223 G GF TL+ +E +T R HR YLVN+ +++E+ NG +L++ N + Sbjct: 184 KYGTYLVGF---TLQQIEGKTDFFRAHRSYLVNMDNIKELYSWFNGTYKLVMDDNNRSEI 240 Query: 224 PVSRRYLKSLKEAIGL 239 P+SR +K LKE IG+ Sbjct: 241 PISRNNVKRLKEIIGI 256 >UniRef50_Q814J1 Sensory transduction protein lytT n=81 Tax=Bacteria RepID=LYTT_BACCR Length = 246 Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 87/250 (34%), Positives = 137/250 (54%), Gaps = 23/250 (9%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+KVL+VDDE LAR+ L+ L+ ++EI+GE + + + + RPD++FLDIQ+ Sbjct: 1 MLKVLVVDDEMLARDELKYLLERTKEVEIIGEADCVEDALEELMQSRPDIVFLDIQLSDD 60 Query: 61 SGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLA------ 113 +G E+ +L ++ P IVF TA+D+YA++AFE A DY+LKP DE R+ +TL Sbjct: 61 NGFEIANILKKMKNPPAIVFATAYDQYALQAFEVDALDYILKPFDEERIVQTLKKYKKQK 120 Query: 114 ----RLRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHE 169 + E DV++ + + I L+ ++D+ +V + VT Sbjct: 121 QSQIETKHEIKGTDVTV------EMHKLALPIEESIVLVNIEDIVYVG--LVDGKVTVKT 172 Query: 170 GKEGF-TELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPV 225 +E + T TL LE + P +R HR ++ N+ H+ EI+ N LI++ G VPV Sbjct: 173 MRETYVTHDTLVILEKKLPQVSFMRVHRSFIANINHITEIQPWFNSTYNLIMKEGSKVPV 232 Query: 226 SRRYLKSLKE 235 SR Y K LK+ Sbjct: 233 SRTYAKELKK 242 >UniRef50_A7GIP3 DNA-binding response regulator, LytTr family n=12 Tax=Clostridium RepID=A7GIP3_CLOBL Length = 254 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 79/252 (31%), Positives = 147/252 (58%), Gaps = 15/252 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ +I++DE A E L+ L + + + IV G V K++P+V+F+DI MP + Sbjct: 4 IRAIIIEDEKPAIEELKYVLSKYNFLNIVDVAMTGDVGYELVKKIQPEVVFMDINMPTEN 63 Query: 62 GLEMVGMLDPEHRPY-IVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ--- 117 G+ + + ++ I+F+TA+++YA++AFE A DY+LKP D+ R+ T+ RL++ Sbjct: 64 GISVSKKIKEFNKDINIIFITAYEQYALEAFEIDALDYILKPFDDKRIGVTIKRLQKKID 123 Query: 118 ERSKQDVSL--------LPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHE 169 E+ K+++ + L + ++ LK IPC +I L+ +K++ + + YV + + Sbjct: 124 EKYKEEIPVMISDILNKLEKEEKTLKKIPCEYRGKIILIDIKNIYYCYTMEDKTYVKT-D 182 Query: 170 GKEGFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG--LTVPVSR 227 +E T TL+ +E +T L R HR Y+VN+ +++E+ NG +L++ + +PVSR Sbjct: 183 SEEYITHNTLKEIEKKTDLFRVHRSYIVNIDNIKELYSWFNGTYKLVMNDKEQSEIPVSR 242 Query: 228 RYLKSLKEAIGL 239 +K +KE +G+ Sbjct: 243 NNVKKVKEMLGI 254 >UniRef50_B8CWX9 Two component transcriptional regulator, LytTR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWX9_HALOH Length = 253 Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 95/253 (37%), Positives = 140/253 (55%), Gaps = 17/253 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEI-VGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 ++ L+VDDE AR L +F+ E S + V E N + + V+ DV+FLDIQMP + Sbjct: 3 MQALVVDDEAPARNEL-IFMLENSKVNFRVREADNGKKALELVNNHNFDVIFLDIQMPSL 61 Query: 61 SGLEMVG-MLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL---- 115 +GLE+ +L E +P IVF+TA+DEYAIKAFE +A DYLLKP R E+T+ R+ Sbjct: 62 TGLEVAAEILKVEDKPEIVFVTAYDEYAIKAFELNAVDYLLKPFSRKRFEETINRVMSHS 121 Query: 116 RQERSKQDVSLLPENQQ---ALKFIPCTG-HSRIYLLQMKDVAFVSSRMSGVYVTSHEGK 171 +++R K + + Q LK IP RI LL+ ++ + ++ V++TS EG Sbjct: 122 KKDRIKDTIKINKAISQLTPELKRIPVNSKRGRIKLLKPSEIYYATTEGGKVFITSEEGV 181 Query: 172 EGFTELTLRTLESRTPL---LRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL--TVPVS 226 F L+ LE L RCHR YLVNL+ ++E+ G LI+ + +PV Sbjct: 182 FEFAN-GLKELEEMLNLPQFFRCHRSYLVNLSKVKELIPWFKGNYYLIINDESEEEIPVG 240 Query: 227 RRYLKSLKEAIGL 239 R + LK+ + L Sbjct: 241 RTRVNELKKKLNL 253 >UniRef50_Q67QS1 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QS1_SYMTH Length = 256 Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 90/256 (35%), Positives = 137/256 (53%), Gaps = 18/256 (7%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M++ LIVDDE AR LR L + D+E++GE +NA E + ++ L DV+FLD+QMP + Sbjct: 1 MLRALIVDDEYPARMELRYQLSQFPDVEVIGEATNAREAMALINALDYDVIFLDVQMPGM 60 Query: 61 SGLEMVGMLDPEH-RPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +G+E+ L P +VF+TA++ YA+ AFE A DYLLKPI+ RL +T+ RLR+ + Sbjct: 61 TGIELAKSLKGRPVMPKVVFVTAYENYAVSAFEIPATDYLLKPIEAERLGETIQRLREAK 120 Query: 120 SKQDVSLLPENQQA-----------LKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSH 168 PE + L F+ C + L + ++ ++ S VYV ++ Sbjct: 121 EAAAGEARPEASEGAERPAGASKPQLTFLMCEKDDKQIPLPLNEIVYIFSEGYNVYVQTY 180 Query: 169 EGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG--LTV 223 + T TL+ L R P R HR YLVN+ ++EI NG L L++ V Sbjct: 181 -SERYLTRHTLQELTERLPSSQFFRSHRSYLVNIYQVKEISPYFNGAYILKLKDKEHSEV 239 Query: 224 PVSRRYLKSLKEAIGL 239 VSR +K +K+ + Sbjct: 240 IVSRSNVKRMKQLFSM 255 >UniRef50_B1ZUF0 Two component transcriptional regulator, LytTR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZUF0_OPITP Length = 276 Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 81/265 (30%), Positives = 134/265 (50%), Gaps = 33/265 (12%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+VLIVDDEPLARE L + + ++G+C++ + + + +LRPD+LFLD+QMP + Sbjct: 4 IRVLIVDDEPLAREGLALMAGADPAVAVIGQCADGLTAVTQIRELRPDLLFLDVQMPGLD 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTL--------- 112 G E++ L P RP ++F+TAF+++AI+AFE A DYLLKP +AR L Sbjct: 64 GFEVLAALPPAERPAVIFVTAFEQHAIQAFEVCAVDYLLKPCSDARFASALLRAKEGIRQ 123 Query: 113 -------ARLRQ-------------ERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKD 152 ARL Q ++ + + P + I ++ ++ +D Sbjct: 124 RHLGQLSARLEQLLEYVRNLESGASPQAARVAEIQPTAPEPANRIVVKADGALHFIKKQD 183 Query: 153 VAFVSSRMSGVYVTSHEGKEGFTELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLED 209 V ++ ++ V V + K TL++ E + LR HR ++VNL H++ + Sbjct: 184 VLWIEAQGDFVKVQTAT-KTQLVRETLQSFERKLDPAKFLRIHRSFVVNLDHVRRVETAL 242 Query: 210 NGQAELILRNGLTVPVSRRYLKSLK 234 G + + +G + +SR Y LK Sbjct: 243 YGDYSVFMADGTKLRLSRNYRGKLK 267 >UniRef50_Q2S053 LytTr DNA-binding domain family n=2 Tax=Rhodothermaceae RepID=Q2S053_SALRD Length = 278 Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 83/262 (31%), Positives = 140/262 (53%), Gaps = 26/262 (9%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ LIVDDEPLARE L L + + + G + E + A+H+ PD++FLD+QMP ++ Sbjct: 8 IRALIVDDEPLARERLHELLTDAPAVTVAGTAEDGFEAVDAIHEQAPDLVFLDVQMPGMN 67 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS- 120 G++++ + P VF+TA+D+YAIKAF+ A DYLLKP D+ R E+ L R R++ + Sbjct: 68 GIDVIEEIGTADMPVTVFVTAYDQYAIKAFDLAAVDYLLKPFDDERFEEALRRAREQIAN 127 Query: 121 ---------------KQDVSLLPE----NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMS 161 ++D SLL + ++ L+ I G + ++ + D+ +++ Sbjct: 128 REGEAISDRLLRLLQERDPSLLEKESARDEPYLERIAVQGRGKARIVPVDDLTHITA--D 185 Query: 162 GVYVTSHEGKEGFT-ELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELIL 217 G Y H G + + ++TL +R +R HR +V L ++ I G + L Sbjct: 186 GSYAELHTGDDTYVIRERMKTLAARLDPDTFVRVHRSAIVRLDEIELILRGGGGNYAVRL 245 Query: 218 RNGLTVPVSRRYLKSLKEAIGL 239 R+G V VSR + L++ +G+ Sbjct: 246 RDGTRVSVSRSRVDELQDRLGV 267 >UniRef50_C0ZI44 Two-component response regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZI44_BREBN Length = 260 Score = 136 bits (342), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 86/263 (32%), Positives = 140/263 (53%), Gaps = 27/263 (10%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+KV IVDDE ARE LR L++ S++ +VGE + E + AV + PD +FLDI + Sbjct: 1 MLKVFIVDDETPAREELRYLLEQFSEVSVVGEAGSGEEALEAVLQTEPDAVFLDIHLQDR 60 Query: 61 SGLE-----MVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL 115 G++ + M++P P I+F +A++ +A++AFE A DY++KP E RLEKT+ R+ Sbjct: 61 DGVDVGQELLESMVNP---PVIIFASAYEFHAVRAFEAEAVDYIVKPFSEMRLEKTMNRV 117 Query: 116 RQERSKQDVS-----LLPENQQAL----------KFIPCTGHSRIYLLQMKDVAFVS--S 158 R+ R K + + LL E Q+L +P + +I L+ ++ + + Sbjct: 118 RKMRRKSEPALDASPLLEERLQSLLQNVLVDTQPHRVPVEKNGKIMLIDPNEIVYATLEG 177 Query: 159 RMSGVYVTSHEGKEGFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILR 218 R + +Y + FT L + SR R HR ++VNL+ E+ G L+++ Sbjct: 178 RYASIYTAGEQYATTFTLQELESRLSRQQFFRTHRAFIVNLSKTAELVPWFKGSIHLVMQ 237 Query: 219 N--GLTVPVSRRYLKSLKEAIGL 239 + VPVSR +K LK+ +G Sbjct: 238 DQRKTEVPVSRNVVKELKKRLGF 260 >UniRef50_B1ZMA5 Two component transcriptional regulator, LytTR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZMA5_OPITP Length = 268 Score = 135 bits (341), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 86/246 (34%), Positives = 133/246 (54%), Gaps = 20/246 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ +IVDDEP AR +R+ L + +IE+VGE E + + + RP + FLD+QMP Sbjct: 16 IRTIIVDDEPAARRGVRLLLAQDPEIELVGEAGTGAEAVTLIERERPALAFLDVQMPGGD 75 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEAR----LEKTLARLRQ 117 G E + + P IVF+TA+DE+A++AFE +A DYLLKP D+AR LE+ +RQ Sbjct: 76 GFETLAQVGVAAAPVIVFVTAYDEHALRAFEVNAIDYLLKPYDDARFRAALERAKGAVRQ 135 Query: 118 ERSKQDVS----LLPENQQALKFIPCTGH------SRIYLLQMKDVAFVSSRMSGVYVTS 167 R + + + L+ E A + +G I L+ ++ ++ + G YV Sbjct: 136 RRGEAESARWHQLVRELATARRSAAASGRVVVKTAGEILFLKPDEIDWIEA--EGDYVKF 193 Query: 168 HEGKEGF-TELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTV 223 H G G+ T+ LE+R +R HR +VNL LQ++ G+ +ILR+G + Sbjct: 194 HAGSRGYLMRETMTQLEARLDPQQFVRIHRSAIVNLDRLQKLSPSFAGEYAVILRDGTKL 253 Query: 224 PVSRRY 229 +SR Y Sbjct: 254 KLSRGY 259 >UniRef50_C9RCQ8 Two component transcriptional regulator, LytTR family n=1 Tax=Ammonifex degensii KC4 RepID=C9RCQ8_AMMDK Length = 265 Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 95/252 (37%), Positives = 133/252 (52%), Gaps = 18/252 (7%) Query: 4 VLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGL 63 ++VDDEPLAR+ L+ L + +I+GE NA E + V +LRPDV+FLDI+M SG Sbjct: 5 AIVVDDEPLARDELKYLLSFHPECQIIGEADNAEEALKLVVELRPDVVFLDIRMRGTSGF 64 Query: 64 EMVG-MLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL------- 115 E ML H P +VF TA+D+YA+ AFE A DY+LKP + RL +T+ RL Sbjct: 65 EAAKRMLSLPHPPLVVFATAYDDYAVGAFELGAVDYILKPFEPERLAQTVRRLSSFKSQS 124 Query: 116 -RQERSKQDVS-LLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 R E + + +S LL E LK +P I L+ +D+ F + V H E Sbjct: 125 ARWEEALERLSQLLEEGPPKLKKLPVEKEGEIRLIPYQDIIFAQAHEGEALV--HTANEY 182 Query: 174 F-TELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG--LTVPVSR 227 F TL LE R LR H+ +LVNLA + + G +I+ + +PVS+ Sbjct: 183 FYYRGTLAELEGRLKNHGFLRVHKSFLVNLARIGGLVPWFKGTYWVIMEDDKRTHIPVSK 242 Query: 228 RYLKSLKEAIGL 239 +K LK +GL Sbjct: 243 AQVKQLKALLGL 254 >UniRef50_Q1IKW2 Transcriptional regulator, LytR/AlgR family n=2 Tax=Acidobacteria RepID=Q1IKW2_ACIBL Length = 253 Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 84/248 (33%), Positives = 137/248 (55%), Gaps = 16/248 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + +IVDDE LAR L L S+IE++ EC+N E + AV + +PD+LFLDIQMP++ Sbjct: 6 LTAVIVDDEELARAVLHEMLSHHSEIELIAECANGFEAVKAVTERKPDLLFLDIQMPKLD 65 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE-RS 120 G E++ ++ + IVF TA+D+YA+KAF+ HA DYLLKP R E LAR ++ R Sbjct: 66 GFEVLELIGSDMA--IVFATAYDQYALKAFDVHAVDYLLKPYGADRFEAALARAKERARE 123 Query: 121 KQDVSLLPE--------NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 K+ + E Q A + + G + ++++ + FV ++ + + S +G + Sbjct: 124 KKPTPVSAELRAAATAPGQYADRLVVRDG-TNVHIIPTAKLDFVEAQDDYIALAS-KGAK 181 Query: 173 GFTELTLRTLES---RTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRY 229 + T+ ++E+ LR HR Y+VNL + ++ IL++G +PVSR Sbjct: 182 HLKQQTISSIETVLDPKQFLRIHRSYIVNLDRVAKVEPYGKDSRVAILQDGTKLPVSRSG 241 Query: 230 LKSLKEAI 237 L+E + Sbjct: 242 YARLREVL 249 >UniRef50_B4CWB7 Two component transcriptional regulator, LytTR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWB7_9BACT Length = 250 Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 81/249 (32%), Positives = 138/249 (55%), Gaps = 16/249 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+VL+VDDE + R LR L+ + D++++GEC++ +E + + DVLFLDI MP + Sbjct: 4 IRVLLVDDERIGRHRLRQLLEREPDMKVIGECADGLEALAFLQAQPADVLFLDINMPGMD 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E++ L+ + P +VF+TA+D++A++AFE A DYLLKP RL K L R+R+ + Sbjct: 64 GFELLDRLEQKPEPLVVFVTAYDDHAVRAFEACALDYLLKPFSPERLAKALLRVRERMNA 123 Query: 122 QDV-SLLPEN-------QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSH-EGKE 172 +++ S P ++ +F+ +G R+ + + +V + +G Y H GK Sbjct: 124 RELESESPHRATESAALSESPRFVVRSG-GRVAFVDAGQIDWVEA--AGNYAIFHVGGKN 180 Query: 173 GFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRY 229 T+ LE++ P +R R +VNL ++ + G +L NG VPV+ R Sbjct: 181 HMIRETMSALEAQLPPERFMRMSRSAIVNLTRIKALETSPGGGDCAVLSNGQRVPVT-RS 239 Query: 230 LKSLKEAIG 238 ++ + E +G Sbjct: 240 IREIAERVG 248 >UniRef50_B8FVL1 Two component transcriptional regulator, LytTR family n=8 Tax=Clostridia RepID=B8FVL1_DESHD Length = 268 Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 89/268 (33%), Positives = 147/268 (54%), Gaps = 32/268 (11%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ L+VDDE AR+ LR LQ+ +D++++GE +NA+E + ++ L V+FLDI MP + Sbjct: 3 LRALLVDDESPARKELRYLLQDYTDLQVIGEAANAIEALELINNLEYSVVFLDIDMPGLK 62 Query: 62 GLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL----- 115 G+++ L + E P I+F+TA +E+A+ AF +A DYLLKPI+ RL++ + +L Sbjct: 63 GIDLARQLKEKESSPAIIFITAHEEFAVDAFCVNALDYLLKPINPKRLDQAIKKLFIQHG 122 Query: 116 -------------RQERSKQDVSLL---PENQ--QALKFIPCTGHSRIYLLQMKDVAFVS 157 + + D L PEN + L+ IP + LL+ +++ ++ Sbjct: 123 AGTPPASPSLSEPDEPTTATDTPLPKQPPENSTIRPLEVIPVEQRGKTILLRPEEIVYIY 182 Query: 158 SRMSGVYVTSHEGKEGF-TELTLRTLESR-TP--LLRCHRQYLVNLAHLQEIRLEDNGQA 213 + V+ + KE + T TLR LE+R P R HR YLVN+ ++E+ NG Sbjct: 183 TDKDNVFAKTQ--KESYLTRFTLRELEARLNPNLFFRTHRCYLVNIKRMRELIPYFNGTY 240 Query: 214 ELILRNG--LTVPVSRRYLKSLKEAIGL 239 +++ + VPVSR + LKE +GL Sbjct: 241 SIVVDDHERSEVPVSRTQSRKLKEILGL 268 >UniRef50_B1I1G2 Response regulator receiver protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I1G2_DESAP Length = 249 Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 84/245 (34%), Positives = 133/245 (54%), Gaps = 14/245 (5%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 +++ LIVDDE ARE LR L ++++GE ++A E + + + DV+FLDI+MP I Sbjct: 2 LLRTLIVDDEYPAREELRYLLGRCGSVQVIGEAADAQEALKLIKAVAYDVIFLDIRMPGI 61 Query: 61 SGLEMVGMLDPE-HRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 SG+ + L + + P +VF+TA++EYA+ AF A DYL+KP+ E RL + +ARL++ Sbjct: 62 SGIGLARELRTQKNAPVVVFVTAYEEYALDAFGVGAVDYLIKPVTEKRLSEVIARLKER- 120 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 PE + + T I + +++ + + V V + G+ TL Sbjct: 121 ------FRPEKDKPFAAVAITRRGNIVPVPTQEITHIYAESDRVIVCTA-GERASAPYTL 173 Query: 180 RTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELIL--RNGLTVPVSRRYLKSLK 234 L R P R HR ++VNL ++EI+ + NG L + R VPVSR + +LK Sbjct: 174 EELARRLPQDIFFRSHRSFIVNLKFIKEIKPDLNGTYVLQINDRQNSEVPVSRSRVSALK 233 Query: 235 EAIGL 239 E +GL Sbjct: 234 ERLGL 238 >UniRef50_Q7P589 Two-component response regulator n=15 Tax=Fusobacterium RepID=Q7P589_FUSNV Length = 245 Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 80/242 (33%), Positives = 136/242 (56%), Gaps = 13/242 (5%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI +IV+DE ARE L+ FL E+ +I+++ E N ++ + + DV+FLDI MP + Sbjct: 6 MINCIIVEDELPAREELKYFLNEEKEIKLIAEFDNPLDTLNFLENNTADVIFLDINMPDM 65 Query: 61 SGL---EMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ 117 +G+ +++ + P+ + I+F+TA+ +YA+ AFE AFDYLLKP E+R++ L L Sbjct: 66 NGISLGKIITKMYPDMK--IIFITAYKDYAVDAFEIKAFDYLLKPYSESRIKSLLKSLVN 123 Query: 118 ERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL 177 +S+ S+ N LK I R+Y++ + DV ++ + + S++ K+ +++ Sbjct: 124 IKSEVTTSIKNTN---LKKITVNIDERLYVISLTDVDYIEASEKETLIFSNQ-KKYISKI 179 Query: 178 TLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT-VPVSRRYLKSL 233 + E RCHR ++VNL + EI N + ++N T +PVSR +K L Sbjct: 180 KISKWEEMLKGDNFYRCHRSFIVNLDKITEIEQWFNSSWIIKIKNYTTAIPVSRNNIKEL 239 Query: 234 KE 235 KE Sbjct: 240 KE 241 >UniRef50_C7MLP3 Response regulator of the LytR/AlgR family n=8 Tax=Coriobacteriaceae RepID=C7MLP3_CRYCD Length = 238 Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 88/244 (36%), Positives = 136/244 (55%), Gaps = 12/244 (4%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 ++K +IVDDE AR L+ L E E+V E ++ E I + + DV+FLDI MP Sbjct: 2 VLKAIIVDDEAPARSELKFLLDELGQTEVVAEAASVREAIEKLKEYPCDVMFLDINMPEA 61 Query: 61 SGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 SGL++ L ++ P +VF+TA+ E+AI+AF+ +A DYL+KP++ RL + LAR+R+ Sbjct: 62 SGLQLAEALQHLKYPPAVVFVTAYSEFAIEAFKVNAIDYLVKPVESERLSQALARVREHV 121 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 S L Q L+ IP + L+ + + +V +R Y+ + + F+ ++L Sbjct: 122 S------LHAKVQKLERIPVEKGGKKILIGIDTIRYVMARDDYTYLQTDNDRY-FSTVSL 174 Query: 180 RTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL-TVPVSRRYLKSLKE 235 LE R R HR YLVNL+ + E+ G L L + VPVSRR + SLK+ Sbjct: 175 AQLEKRLDGHGFFRVHRGYLVNLSLVCEVEPVSGGTLLLTLDSCEDKVPVSRRRVSSLKK 234 Query: 236 AIGL 239 A+G+ Sbjct: 235 ALGI 238 >UniRef50_C1P760 Two component transcriptional regulator, LytTR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1P760_BACCO Length = 238 Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 81/242 (33%), Positives = 137/242 (56%), Gaps = 11/242 (4%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+K +VDDE AR+ L L++ +E+ GE + E + + + D++F+D+ + Sbjct: 1 MLKAFVVDDEAPARDELIYLLKKTGQVELAGEAGSVKEALAKLKETEADIVFVDMMLTNE 60 Query: 61 SGLEMVGMLD--PEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE 118 G+++V + P+H P +VF TA+DEYA+KAFE +A DY+LKP +E R+ +T+A++++ Sbjct: 61 HGIDLVKEISRHPQH-PAVVFATAYDEYAVKAFELNAADYILKPFEEKRVAQTVAKVKK- 118 Query: 119 RSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELT 178 + D +P+N L T RI ++ ++ + + S + + + K TE + Sbjct: 119 MLEGDRPAVPKNPGKLA---VTTDERIVIIPVEKLLYAESVDGRTVIATDDKKYTITE-S 174 Query: 179 LRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKE 235 L +E + P + R HR YLVNL + EIR + LI+R+G +PVSR Y LK+ Sbjct: 175 LVNVEKKLPSTSIARVHRAYLVNLDGIVEIRPWFHSTYNLIMRDGAKIPVSRTYKHVLKQ 234 Query: 236 AI 237 I Sbjct: 235 FI 236 >UniRef50_Q1IUM5 Transcriptional regulator, LytR/AlgR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IUM5_ACIBL Length = 317 Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 80/248 (32%), Positives = 141/248 (56%), Gaps = 25/248 (10%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ +IV+DEPLA L+ L + I ++G +N E + + KL+P+V+FLD+Q+P S Sbjct: 63 LRAVIVEDEPLATMKLKKLLDGEPGIRVMGHAANIDEAVAQIRKLQPNVIFLDVQLPGGS 122 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR----- 116 G E++ L +RP I+F TA+D+YAIKAF+ HA DYLLKP D+ RL + + + R Sbjct: 123 GFEVLDRLPEANRPCIIFTTAYDQYAIKAFDLHAADYLLKPFDQERLHRAIEKARVQAAG 182 Query: 117 ------QERSKQDVSLLPEN----QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT 166 +R + + LP+N ++ L F R+ L+ ++ ++ + + YV Sbjct: 183 PVDKEWTQRLAKLIETLPKNGRNPEERLVF---KSGGRVLFLEQDEIEWIEA--ASNYVH 237 Query: 167 SHEGKEGFTEL--TLRTLESR-TPL--LRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL 221 H G + T+R +E+R PL +R HR +VN+ ++E++ ++G+ +++++G Sbjct: 238 IHCGGNVVHSVRNTIRDVETRLNPLKFIRVHRSIIVNVNRIKELQPCNSGEHVVVMKSGK 297 Query: 222 TVPVSRRY 229 + SR Y Sbjct: 298 ELSCSRTY 305 >UniRef50_C7R6S4 Two component transcriptional regulator, LytTR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6S4_KANKD Length = 234 Score = 133 bits (335), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 88/242 (36%), Positives = 136/242 (56%), Gaps = 22/242 (9%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI VLIVDDE AR+ LR L SD+EIVGE N + + ++ L+PD++FLDI MP + Sbjct: 1 MISVLIVDDEQPARQRLRRLLDSHSDLEIVGEAENGQQALDLINSLQPDLIFLDISMPVM 60 Query: 61 SGLEMVGML---DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ 117 +G+++ L DP+ P+I+F TA+DEYA++AF+ A DYLLKPI RL K L +L++ Sbjct: 61 NGMQVAKQLNQNDPQ--PHIIFTTAYDEYALQAFDVDAQDYLLKPIRHERLSKALQKLQR 118 Query: 118 ERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG-FTE 176 + + Q ++ + + ++++ F+ S Y H KE + Sbjct: 119 QLT----------QTKTAYLSIRERETVRRVAVEEILFLHSDQK--YTEVHLAKEVLLSS 166 Query: 177 LTLRTLESR--TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVP-VSRRYLKSL 233 +L+ LE R +R HR LVN HL I +D+G LI ++ T P +SRR+ + Sbjct: 167 ESLKDLEQRFSHDFIRIHRSTLVNRQHLIGIEQDDSGCLALI-QDAKTKPEISRRHQPDV 225 Query: 234 KE 235 ++ Sbjct: 226 RQ 227 >UniRef50_Q1YRG1 Response regulator n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRG1_9GAMM Length = 270 Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 85/265 (32%), Positives = 136/265 (51%), Gaps = 34/265 (12%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K +IVDDEPLA + LR L + +EI+GECSN + I A L PD++FLDIQMP ++ Sbjct: 4 LKTIIVDDEPLALDLLRSILGDIEGVEIIGECSNGRDAIAAASSLHPDLIFLDIQMPGVN 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E+V + + P ++F TAF+++AI AF+ HA DY+LKP+D R+E+ + R + S Sbjct: 64 GFEVVKAMQSDAMPMVIFATAFNQFAIDAFDMHAVDYVLKPLDPERVERAVQRALERFSV 123 Query: 122 QD---------VSLLPENQQALKFIPCTGHS-------------------RIYLLQMKDV 153 QD + + E + L P S + ++ D+ Sbjct: 124 QDEDTVHKVPLIGAINEITKRLDKEPGASDSLAEELPEGIKRKLLIRDSGVVKVVPFDDI 183 Query: 154 AFVSSRMSGVYVTSHE-GKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLED 209 +V + +G Y+ H G+ TLR L + +R HR +VN+ + I Sbjct: 184 DWVDA--AGDYMCVHALGETHIVRSTLRELLEKLDEKMFIRIHRSTVVNIERVASITRLQ 241 Query: 210 NGQAELILRNGLTVPVSRRYLKSLK 234 G + L L +G ++ VSR Y ++++ Sbjct: 242 KGGSLLHLADGNSLRVSRNYREAIR 266 >UniRef50_C6Y3C9 Response regulator receiver n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6Y3C9_PEDHD Length = 242 Score = 132 bits (333), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 80/244 (32%), Positives = 131/244 (53%), Gaps = 18/244 (7%) Query: 4 VLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGL 63 VL++DDE R ++ +L+ +D + GECSN +E + ++ L PD++FLDIQMP +G Sbjct: 6 VLVIDDEDHGRVLVKQYLEPYADFFVAGECSNGIEAVKFINMLEPDLIFLDIQMPGANGF 65 Query: 64 EMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSKQD 123 E++ +D H P ++F TAFD+YAI+AFE + DYLLKP + R ++T+ARL+ + + Sbjct: 66 EVLQRID--HVPDVIFTTAFDKYAIRAFEINVIDYLLKPYTKERFDQTMARLKSKPAA-- 121 Query: 124 VSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSS------RMSGVYVTSHEGKEGF-TE 176 LP+ P + RI + K +S + G Y + + F + Sbjct: 122 ---LPQLAMGTFSSPHSYPERIMVEHQKRFKNISVHDIMYLKADGDYTRIYTEETSFLSS 178 Query: 177 LTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSL 233 + + + +R HR ++NL ++QE+ D G+ L+L NGL + R YL + Sbjct: 179 FGISVIAQKFDPAKFVRIHRSVIINLDYVQEL-YRDIGKTYLVLDNGLEFNIGRSYLPVI 237 Query: 234 KEAI 237 K I Sbjct: 238 KSFI 241 >UniRef50_Q02A01 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02A01_SOLUE Length = 255 Score = 132 bits (333), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 85/247 (34%), Positives = 135/247 (54%), Gaps = 14/247 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I LIVDDEP+AR LR L+ IEI GE +N E + + LRP+++FLD+QMP ++ Sbjct: 6 ITTLIVDDEPVARRVLREGLESIPGIEIAGEAANGREALDKIAALRPELVFLDLQMPVMT 65 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ---- 117 G E+V LD P IV +TAFD++A++AFE A DYLLKP+ EARL++ + R Sbjct: 66 GFEVVRRLDGPPLPVIVIVTAFDQHALQAFEAGAIDYLLKPVTEARLQRAVERAAVLLNR 125 Query: 118 --ERSKQDVSL----LPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGK 171 E + SL PE+ ++ + S LL +V + V++ + + + Sbjct: 126 PIEIANHVASLASVTTPEHPNKIRKVVGRSGSDYVLLDADEVLAFQAERELVWIITAK-Q 184 Query: 172 EGFTELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRR 228 F +L+T+E R R HR +VN+ H++++ + + + L NGL + VS+R Sbjct: 185 RLFATQSLKTIEERLVGPQFQRVHRNAIVNVDHVRKLTALSSQRWYMTLSNGLQLVVSKR 244 Query: 229 YLKSLKE 235 +++ Sbjct: 245 QAHKIRD 251 >UniRef50_A0Y0Z9 Response regulator of the LytR/AlgR family protein n=1 Tax=Alteromonadales bacterium TW-7 RepID=A0Y0Z9_9GAMM Length = 262 Score = 132 bits (333), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 82/238 (34%), Positives = 133/238 (55%), Gaps = 16/238 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +++L DDE ARE L L +++VG +N E I +++L PDV+ LDIQMP I+ Sbjct: 13 MRILFADDELPAREKLSHQLSLMEHVDVVGIATNGKEAIALINELTPDVVLLDIQMPEIN 72 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLAR----LRQ 117 GLE++ +L+ ++P I++ TA+D++AI+AFE + DYLLKP ARL+K LA+ L Q Sbjct: 73 GLELIDLLN--YQPIIIYTTAYDQFAIEAFEHASTDYLLKPFPIARLKKALAKAQQQLDQ 130 Query: 118 ERSKQDVS------LLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGK 171 +R+ V+ + +L + RI+LL D+ F+ S + E Sbjct: 131 QRAHTHVTSCAGEPAFTLTESSLNKLVSKSGERIFLLSPSDIKFIKSEQGNSLAWNGETF 190 Query: 172 EGFTELTLRTLESRTPL---LRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVS 226 ++ TL LE + +R HR YLVN+ H++EI+ NG+ +I+ + + +S Sbjct: 191 NHLSD-TLDQLEHALAMHNFVRIHRSYLVNIDHIKEIQRWFNGKLMVIVNDDVKSELS 247 >UniRef50_B5YGI8 Sensory transduction protein LytT n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YGI8_THEYD Length = 257 Score = 132 bits (332), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 84/253 (33%), Positives = 136/253 (53%), Gaps = 15/253 (5%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 + ++VDDEP ARE L L +I+GE +A + I K++ DV+FLDI+MP + Sbjct: 2 LFSAIVVDDEPYAREELIYILSHFPTCQIIGEAGSAKDCIFLYSKVKSDVVFLDIEMPDM 61 Query: 61 SGLEMVGMLDPEHR-PYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 SGLE+ ML + P IVF TA+D+YAI+AFE A DY+LKP +E R+ KT+ R+ + Sbjct: 62 SGLEIANMLSTFNEPPLIVFATAYDDYAIEAFELGAIDYILKPFEEKRIAKTIMRIENLK 121 Query: 120 SKQ--------DVSLLPENQQALKFIPCTGHSR-IYLLQMKDVAFVSSRMSGVYVTSHEG 170 + Q +S ++ K +P + I + D+ + + GV + + + Sbjct: 122 NNQTEWNNAVNKLSQFLGKKKVFKKLPVQQKAGVISFIPYVDILYCEAYEGGVKIFTLK- 180 Query: 171 KEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVS 226 E + + TL LE R +R H+ Y+VNL ++ + G L++ + +PVS Sbjct: 181 DEYYFDGTLSELEMRLKEEGFMRVHKSYIVNLKRIEAVLPWFKGTYWLVIEGKKIQLPVS 240 Query: 227 RRYLKSLKEAIGL 239 + +K LKE +G+ Sbjct: 241 KSIIKELKEVLGI 253 >UniRef50_Q1ISZ6 Transcriptional regulator, LytR/AlgR family n=2 Tax=Acidobacteria RepID=Q1ISZ6_ACIBL Length = 262 Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 88/273 (32%), Positives = 137/273 (50%), Gaps = 48/273 (17%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + +IVDDE LAR+ L LQ D++++ + N VEG+ + + PD++FLD+QMP + Sbjct: 3 LSAVIVDDEQLARDELAYLLQSIGDVDVIAQGKNGVEGVNLIKEHNPDLVFLDVQMPGLD 62 Query: 62 GLEMV-GMLDPE-HRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 G ++ +LD + P ++F TAFD+YA+KAFE +A DY+LKP D+ R+ + + + + + Sbjct: 63 GFGVIKKLLDRKVAMPQVIFATAFDQYAVKAFEVNAVDYVLKPYDKKRIAQAIDKAK--K 120 Query: 120 SKQDVSLLPENQQALKF-----------------IPCTGHSRIYLLQMKDVAFVSSRMSG 162 + + P N Q + I + R++L+ KD+ F S G Sbjct: 121 NLESAEPAPSNDQRIDALVKMLEQKTEQKAGQSKILLKANGRMFLVDQKDICFASIE-DG 179 Query: 163 VYVTSHEGKEGFTELTLRTLE----SRTP--LLRCHRQYLVNLAHLQE----------IR 206 V EG + RTLE S P R HR +LVN+ ++E IR Sbjct: 180 VITVVAANMEG--QSNCRTLEELLDSLDPGAFWRAHRSFLVNINRIKEVVPWFKSSYQIR 237 Query: 207 LEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL 239 ++D Q E +PVSR K L+E GL Sbjct: 238 MDDRKQTE--------IPVSRAQTKRLRELFGL 262 >UniRef50_A5VAK9 Two component transcriptional regulator, LytTR family n=10 Tax=Sphingomonadales RepID=A5VAK9_SPHWW Length = 266 Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 84/257 (32%), Positives = 132/257 (51%), Gaps = 31/257 (12%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ ++VDDEPLA + LR+ L D+EI+ C N E I A+ +PD++FLDIQMP Sbjct: 3 IRTILVDDEPLAIQGLRLRLAAHEDVEIIETCLNGREAIRAIKTHKPDLVFLDIQMPGFD 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ---- 117 G ++ L P VF TA++++AI+AF+ A DYLLKP+DE RL TL R+RQ Sbjct: 63 GFSVIQGLMEVEPPLFVFCTAYEDHAIRAFQAQALDYLLKPVDEQRLADTLDRVRQRLAE 122 Query: 118 ERSKQDVSLL---------------------PENQQALKFIPCTGHSRIYLLQMKDVAFV 156 ++ ++V L P + + K I +I+ + + + + Sbjct: 123 KKGVEEVGRLKEVLAEVAPDAADSYGESDDAPASNRFEKMINIKDRGQIFRVDVDTIERI 182 Query: 157 SSRMSGVYVTSHEGKEGFT-ELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQ 212 + +G Y+ + G T++ LE R R HR +VNL +++++ NG+ Sbjct: 183 DA--AGDYMCIYTGDNTLILRETMKDLEKRLDPRRFQRVHRSTIVNLDLVRQVKPHTNGE 240 Query: 213 AELILRNGLTVPVSRRY 229 L+L +G V VSR Y Sbjct: 241 CFLVLDSGAQVKVSRSY 257 >UniRef50_B1ZQK1 Two component transcriptional regulator, LytTR family n=2 Tax=Opitutus terrae PB90-1 RepID=B1ZQK1_OPITP Length = 255 Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 80/247 (32%), Positives = 134/247 (54%), Gaps = 12/247 (4%) Query: 3 KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 + LIVDDEPLARE L+ LQ Q+ +E+ GEC + + + + + RPD++FLD+QMP SG Sbjct: 5 RALIVDDEPLARERLQRLLQRQNTVELAGECGDGPDALATIERERPDIVFLDVQMPGCSG 64 Query: 63 LEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLAR---LRQER 119 L++ L RP I+F+TA + +A++AF A DYLLKP DE RL + + R L Q R Sbjct: 65 LDVANQLPATARPAIIFVTAHERFAVEAFAARAVDYLLKPFDEERLHQAVERALELLQSR 124 Query: 120 SKQDV-----SLLPENQQAL-KFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 ++V S+L + Q + + I RI ++ ++V ++ + + + + Sbjct: 125 QAREVETRLESILAQVQPRVPERIAVRVDGRIVFVKPREVVWIEAANNYCVLHLTDAPRL 184 Query: 174 FTELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYL 230 +L ++E R R R +V ++E+ + G+ ++L NG +P+SR Sbjct: 185 MLRESLGSVEQRLGAANFARISRSAVVRSDQIKELESANYGEYVVVLLNGTRLPLSRYRR 244 Query: 231 KSLKEAI 237 L+ A+ Sbjct: 245 NELERAL 251 >UniRef50_Q5WAM2 Two-component response regulator n=2 Tax=Bacillus RepID=Q5WAM2_BACSK Length = 246 Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 88/252 (34%), Positives = 134/252 (53%), Gaps = 27/252 (10%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ L+ DDE +RE L L IE+VGE ++ E + L+PD+LFLDI+MP + Sbjct: 8 IRTLVADDEKYSREELLYLLGFFPQIEVVGEAASGHETAAKMMDLQPDLLFLDIEMPEMD 67 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL----- 115 G E+ + + P+IVF TA+ ++A++AF+ A YL+KPIDE RL +T+A++ Sbjct: 68 GTEIAAIAKQMKQPPFIVFATAYPQFAVEAFQLQAKGYLIKPIDETRLAETIAQVEDMLA 127 Query: 116 ---RQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 +ER+K L E +A+ F L+ + +A+ V + G Sbjct: 128 LTAERERTKPPAKLAVEGDEAIHF-----------LEPESIAYAYRDEKSTKVITATGAY 176 Query: 173 GFTELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT--VPVSR 227 T LTL+ LE+R R H+ YLVN A + E+ NG +L L+ G+ +PVSR Sbjct: 177 E-TRLTLKELETRLAPYSFFRVHKSYLVNTACITEMNAWFNGAYQLKLK-GIDDHIPVSR 234 Query: 228 RYLKSLKEAIGL 239 Y+K L+ I L Sbjct: 235 NYVKPLRSQIEL 246 >UniRef50_A1TXX0 Response regulator receiver protein n=3 Tax=Marinobacter RepID=A1TXX0_MARAV Length = 252 Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 83/240 (34%), Positives = 125/240 (52%), Gaps = 7/240 (2%) Query: 3 KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 +VLI DDEPLAR+ ++ L+ D + GE + + + V +L PD+L LDI+MP + G Sbjct: 8 RVLIADDEPLARQRIQRLLEALPDYRVCGEAVDGNDTLRKVAELEPDILLLDIRMPGMDG 67 Query: 63 LEMVGMLDPEHR-PYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 +E L H P ++F TA+D YAI+AFE A YLLKP+ L LAR + Sbjct: 68 MEAADQLSKLHNPPAVIFCTAYDHYAIQAFEVRAVAYLLKPVRREALADALARAGKLNRV 127 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT-SHEGKEGFTELTLR 180 Q +L + H L+ + D+ + + YVT H E + TL+ Sbjct: 128 QRQALAQSTDAGNDQLAVRTHRGTELIDLSDLYYCEADQK--YVTLHHRHGETVCDYTLK 185 Query: 181 TLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILR-NGLTVPVSRRYLKSLKEAI 237 LE P LLR HR LV + +Q +R +GQ +L L+ N +PVSRR+ ++++ + Sbjct: 186 ELEQAYPDHLLRVHRHTLVGVRFIQGLRRSSDGQNQLALKGNATLLPVSRRHASTVRQWL 245 >UniRef50_A3YCL0 Response regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3YCL0_9GAMM Length = 273 Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 88/265 (33%), Positives = 138/265 (52%), Gaps = 39/265 (14%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++V+I DDE L R+ LR +Q S +E+V EC N + + A+H L+PDV+FLDI MP I Sbjct: 3 LRVIIADDESLLRKELRELIQGFSALELVAECENGITTLEAIHTLKPDVVFLDIMMPGID 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL------ 115 GL++V + PE P +V++TAF+++A+ AFE A DYLLKPI E R EKT+ RL Sbjct: 63 GLKLVEHIQPEVMPKLVYITAFNQFAVNAFEVEAIDYLLKPISETRFEKTIDRLLAAMPI 122 Query: 116 RQERSKQDV---SLLPENQQAL----------------KFIPCTGHSRIYL--------L 148 R E + V S + + QA+ K +P + L + Sbjct: 123 RPETVSESVLYQSQVRSSDQAMTTVQTGSQASQMHRQSKTLPNPVSKTLVLDQKVPKTEV 182 Query: 149 QMKDVAFVSSRMSGVYVTSHEG-KEGFTELTLRTLESR---TPLLRCHRQYLVNLAHLQE 204 +++D+A+V + +G Y+ H K T++ L R R HR +VN +++ + Sbjct: 183 KLEDIAWVDA--AGDYMCIHANQKTHILHSTMKALFKRLGQDQFCRIHRSTIVNKSYISK 240 Query: 205 IRLEDNGQAELILRNGLTVPVSRRY 229 + G + L +G + +SR Y Sbjct: 241 AYPQSKGDYLVELVDGTQLRLSRTY 265 >UniRef50_Q482L9 LytTr DNA-binding response regulator n=9 Tax=Alteromonadales RepID=Q482L9_COLP3 Length = 280 Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 89/279 (31%), Positives = 148/279 (53%), Gaps = 44/279 (15%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + +IVDDEPLAR+ L + L+ DI ++ +C N E + A+ + D++FLDIQMP ++ Sbjct: 3 LSTIIVDDEPLARKGLAIRLRAHDDINVIEQCCNGREALEAIRAYQVDLMFLDIQMPGLN 62 Query: 62 GLEMVGMLDPE--HRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ-- 117 G +++ + + P +VF+TAFD+YA+KAFE HA DYLLKP DE RLE+T+ +++ Sbjct: 63 GFQVIESIIEQGLAMPVVVFVTAFDQYALKAFEVHALDYLLKPADEERLEQTIDKIQHYF 122 Query: 118 -------ERSK-----QDVS------LLPE--NQQALKF------IPCTGHSRIYLLQMK 151 +SK DV+ +L E N Q L + + + +K Sbjct: 123 KSSADTAHKSKLVRLVSDVTGNDYQKILTELDNDQELTLSSYSDVLAIKDAGEVNRVSVK 182 Query: 152 DVAFVSSRMSGVYVTSH--EGKEGFTE-------LTLRTLESR---TPLLRCHRQYLVNL 199 D+ ++ + +G Y+ H E K+ + T++ LE+ +R HR +VN Sbjct: 183 DILWIDA--AGDYMCVHTLETKQNTRQENTYILRKTMKELEACLDPKQFIRNHRSTIVNK 240 Query: 200 AHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIG 238 + + + NG+ L+L+NG + VSR Y +K+A+ Sbjct: 241 NIIDKFCSQVNGEYFLVLKNGKELKVSRSYKDKVKQAVN 279 >UniRef50_A8MGZ3 Two component transcriptional regulator, LytTR family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MGZ3_ALKOO Length = 246 Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 80/247 (32%), Positives = 140/247 (56%), Gaps = 12/247 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I +I+DDE L+ E L L + IEIVG+ ++G+ + L+PD+ F+D++MP IS Sbjct: 3 ITAVIIDDEYLSIEELSFLLSKIHFIEIVGKAECGLDGLDLIRNLKPDLAFVDVKMPDIS 62 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ--E 118 G+++V ++ + I+F TA+D+YAI+AF A DY+LKP +E R+ K+L + R+ E Sbjct: 63 GIQLVKKINELDIHCKIIFTTAYDKYAIEAFNVDAIDYILKPYEEKRVIKSLLKAREIIE 122 Query: 119 RSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF-TEL 177 + + + LP A + R+ L+ KD+ + + +++ + KE F + Sbjct: 123 NTAKQHTELPPVNIAFNKLSALKDDRLILIDTKDILLIYTEDRNIFIKTK--KEIFSSSY 180 Query: 178 TLRTLE---SRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT--VPVSRRYLKS 232 +++ LE S+ R HR YLVNL ++E+ NG +L +G+ +P+SR ++K Sbjct: 181 SMQELEERLSKDGFFRTHRSYLVNLNKIKEVSPWFNGSYIAVL-DGINDEIPISRNHVKE 239 Query: 233 LKEAIGL 239 K +G+ Sbjct: 240 FKRILGI 246 >UniRef50_UPI0001C42EF9 two-component response regulator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42EF9 Length = 244 Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 78/243 (32%), Positives = 133/243 (54%), Gaps = 7/243 (2%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IK +I+DDEP +R+ L L E DIE++ C++A G+ ++ PD++FLDI MP+I+ Sbjct: 4 IKTMIIDDEPHSRDELSHLLSEHKDIEVIDRCTDAQSGLVSIMNKEPDLVFLDIDMPKIN 63 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GLE+ L+ + +P ++F TA ++YA KAF AFDYLLKP DE L + L+R R + Sbjct: 64 GLELASSLNKLKKKPKVIFATAHEQYAAKAFRVQAFDYLLKPFDEEELSEALSRYRDQMD 123 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 ++ S + + L + + I + + +++ + + E KE L+ Sbjct: 124 DKE-SDERKIESRLTRLAVEDNEEISYIDPNTIIYMAREERDTVIRTRE-KEYRLRTPLK 181 Query: 181 TLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKSLKEA 236 L+ + P ++ H+ YLVN A + + NG ++ L+ +P SR Y+++L+E Sbjct: 182 DLKQKLAGYPFVQTHKSYLVNAAEIAGLIPWFNGAYQIKLKGVKEEIPASRTYVRALREQ 241 Query: 237 IGL 239 L Sbjct: 242 FEL 244 >UniRef50_C5WEM5 Two-component response regulator n=1 Tax=Streptococcus dysgalactiae subsp. equisimilis GGS_124 RepID=C5WEM5_STRDG Length = 242 Score = 129 bits (324), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 79/243 (32%), Positives = 134/243 (55%), Gaps = 6/243 (2%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +KV+I+DDEPLAR L ++E + + + + + + +PD+LFLDI + S Sbjct: 1 MKVVIIDDEPLARMELAYLVEETQMVSAIYQGESIEDAFQLILTHQPDLLFLDIHLTDES 60 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GL++ L + P I+F TA+D +A++AFE +A DY+LKP ++AR++K +A+ + Sbjct: 61 GLDLAKRLSQIPNAPLIIFATAYDNHAVEAFEVNAIDYVLKPFEQARIQKAIAKAKMTLD 120 Query: 121 KQDVSLLPENQ-QALKFIPCTGHSRIYLLQMKDVAF--VSSRMSGVYV-TSHEGKEGFTE 176 +Q + E + K + RIYLL D+ + V + + VY T+H Sbjct: 121 RQQTNHSKEAEVPQTKRLTLEVDERIYLLPFSDILYCEVQGKETTVYTKTAHYTSHTSLS 180 Query: 177 LTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEA 236 + L + + L+ HR YL+N ++EI+ N ++ + NG VPVSR YLK+ ++ Sbjct: 181 AIEKVLTTES-FLKVHRSYLINTQAIKEIQPWFNQTYQVTMINGGKVPVSRSYLKTFRQR 239 Query: 237 IGL 239 +GL Sbjct: 240 LGL 242 >UniRef50_Q0QJA1 Putative response regulator n=1 Tax=Pseudoalteromonas sp. BB1 RepID=Q0QJA1_9GAMM Length = 266 Score = 129 bits (324), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 83/260 (31%), Positives = 141/260 (54%), Gaps = 29/260 (11%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K L+VDDE A E LR+ L+ +I ++G ++ E I +++ D++FLDI+MP S Sbjct: 4 LKTLLVDDEYSATEGLRIRLEAFPEINVIGSAASVDEAIQLLNQFDVDLIFLDIEMPTKS 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLAR-LRQERS 120 G E++ PE P ++F+TAF ++A++AFE A DYLLKP+ ARL + + R + ER Sbjct: 64 GFELIKHFQPESCPAVIFVTAFHQHAVQAFEVRALDYLLKPVKLARLAEAIERVVTTERL 123 Query: 121 KQDVSLLPENQQALKF------IPCTGHSR----------------IYLLQMKDVAFVSS 158 ++ +L+ +Q +K + G+S I ++ KD+ ++ + Sbjct: 124 QRKTALIEVHQSLIKDATDSQEVGAAGNSEYKFEAENLVIQDAKNPIQIIPFKDILWIDA 183 Query: 159 RMSGVYVTSHEGKEGFT-ELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAE 214 +G Y+ H E L+ LE T LR H+ +VNL+H++++ N + Sbjct: 184 --AGDYMCVHTPAETHVMRARLKELEKNTLPEDFLRIHKSTIVNLSHIKQLNPLRNSEYM 241 Query: 215 LILRNGLTVPVSRRYLKSLK 234 +L++G T+ VSR Y K+LK Sbjct: 242 AVLQSGKTLKVSRTYSKNLK 261 >UniRef50_Q21E91 LytTr DNA-binding region n=2 Tax=Saccharophagus degradans 2-40 RepID=Q21E91_SACD2 Length = 249 Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 87/255 (34%), Positives = 137/255 (53%), Gaps = 23/255 (9%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K +V+D LAR+ L L E +++ +VG+ A E I ++KLRP ++F+DI MP Sbjct: 1 MKAYVVEDSRLARKELTDLLAEHTELNLVGDSGRADEAIEQINKLRPQLVFMDINMPGKD 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G +++ LD + P I+F+TA+ +YAIK+F+ DYLLKPI RL+K L +L++E ++ Sbjct: 61 GFQVLEALD--YSPRIIFVTAYADYAIKSFDYDTVDYLLKPISAERLQKALDKLQREPTQ 118 Query: 122 Q-DVSLLPENQQALKFIPCTGH----SRIY--------LLQMKDVAFVSSRMSGVYVTSH 168 Q D P + T SRI+ L+++ + S G Y + Sbjct: 119 QADREAEPNYTDTP--VDTTAQLEEKSRIFIKDGDQCHLVELAKIIRFES--CGNYTQVY 174 Query: 169 -EGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVP 224 + K+ F L +E R P R RQ++VNL + +I+ NG +L L+NG + Sbjct: 175 FDSKKAFVYRALSKIEERLPDLTFFRASRQHIVNLEFVTDIQPWVNGGYQLTLKNGEQIA 234 Query: 225 VSRRYLKSLKEAIGL 239 VSRR+ LKE + L Sbjct: 235 VSRRHATRLKEILSL 249 >UniRef50_B1ZZB5 Two component transcriptional regulator, LytTR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZZB5_OPITP Length = 268 Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 85/263 (32%), Positives = 137/263 (52%), Gaps = 27/263 (10%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++VLIVDDEPLAR +R +L ++ EIVGEC N V + + + R DVLFLD+QMP + Sbjct: 3 VRVLIVDDEPLARSVIRHWLADKRGAEIVGECGNGVAALELLRQQRVDVLFLDVQMPEMD 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR----- 116 G ++ P ++F+TA+D+YA++AF HA DYLLKP D+ R + R R Sbjct: 63 GFALLRRARAIEIPVVIFVTAYDKYALQAFAAHALDYLLKPFDKERFDHAFKRARLALEQ 122 Query: 117 ---------QERSKQDVSLLPENQQA------LKF---IPCTGHSRIYLLQMKDVAFVSS 158 + R+ D LP ++A L F + +I L++ DV ++ + Sbjct: 123 VRAAGEYRTRVRALLDTLELPVGEEARAQDRQLVFSSRLALRQDGKIVLVRTSDVHWLEA 182 Query: 159 RMSGVYVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAEL 215 V + + E + + TL L ++ +R HR +VN+ ++E+ NG+ E+ Sbjct: 183 EGDYVRIHTRERRHLLHD-TLSHLATQLDPRLFVRVHRSAVVNVECIRELEPSSNGEFEI 241 Query: 216 ILRNGLTVPVSRRYLKSLKEAIG 238 +L +G + SR + L A+G Sbjct: 242 VLVDGRRLHSSRTHRDDLLAALG 264 >UniRef50_Q3AA03 DNA-binding response regulator n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AA03_CARHZ Length = 251 Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 83/262 (31%), Positives = 136/262 (51%), Gaps = 36/262 (13%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI ++VDDEPLARE L+ L+E +E++GE + E + +PDV+FLDI+M + Sbjct: 1 MITAVVVDDEPLAREELKYLLEETERVEVIGEADSGEELFEVLRDRKPDVVFLDIEMYGL 60 Query: 61 SGLEM-VGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +GL++ + +L + P IVF TA+D+YA+KAFE +A DYLLKP R++ TL ++ ++ Sbjct: 61 NGLDVALELLKEKDPPLIVFATAYDQYAVKAFELNALDYLLKPFSAERVKLTLEKIEEKL 120 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 +++ Q+ + I + +Q D + + +Y +G+ L Sbjct: 121 RDKEIY----KQKMWQSIQAIAPQQKVFIQTAD-KILPLKREEIYFVEAQGRYARLRLKN 175 Query: 180 RTLESRTPL------------LRCHRQYLVNLAHLQEI----------RLEDNGQAELIL 217 + + R L ++ H+ +LVN ++EI R+ D+G +E Sbjct: 176 KWVMCRHSLSELEDMLGEKNFVKVHKSFLVNFEQIKEIIPLFGGGLILRMGDDGASE--- 232 Query: 218 RNGLTVPVSRRYLKSLKEAIGL 239 VPV R +LKS KE IGL Sbjct: 233 -----VPVGRTFLKSFKEKIGL 249 >UniRef50_A4A8V2 Sensory transduction protein lytR n=2 Tax=unclassified Gammaproteobacteria RepID=A4A8V2_9GAMM Length = 274 Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 83/269 (30%), Positives = 138/269 (51%), Gaps = 37/269 (13%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + +IVDDE LAR L + LQ+ +++++ EC N E + AV + PD+LFLDIQMP + Sbjct: 4 LSAIIVDDEHLARRGLSMRLQQLPEVDVIAECGNGQEALLAVAQHSPDLLFLDIQMPGMD 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E+V L + P ++F+TA++EYA+ AF+ HA DY+LKPI++ RL + + R R + Sbjct: 64 GFEVVENLQGDDMPMVIFVTAYNEYAVDAFKVHAIDYVLKPIEDDRLHEAVQRAVAHRDQ 123 Query: 122 QD------------VSLLPENQQALKF-------------------IPCTGHSRIYLLQM 150 ++ +S+ E+ ++ I + I +++ Sbjct: 124 ENSTSGKEKLIKLLMSVTGESAAGIEAMAEGVSTEGASSQDSWPEKITVKDGNDIQFIRV 183 Query: 151 KDVAFVSSRMSGVYVTSHE-GKEGFTELTLRTLESR-TP--LLRCHRQYLVNLAHLQEIR 206 D+ +V + +G Y+ H GK +T++ LE+ P LR HR +VN + + Sbjct: 184 ADIEWVDA--AGDYMCIHATGKTHIMRITMKQLEAMLNPALFLRVHRSTIVNNRCVTGAQ 241 Query: 207 LEDNGQAELILRNGLTVPVSRRYLKSLKE 235 NG+ L L G + VSR Y ++E Sbjct: 242 TLTNGEYLLNLEGGTQLKVSRSYKDRIRE 270 >UniRef50_C1AA08 LytT family two-component response regulator n=2 Tax=Bacteria RepID=C1AA08_GEMAT Length = 278 Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 88/265 (33%), Positives = 127/265 (47%), Gaps = 40/265 (15%) Query: 3 KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 +VLIVDDEPLARE L + + + E N + I + RPDV+ LDIQMP +G Sbjct: 4 RVLIVDDEPLARERLSELTRRLAPTAALREAGNGTDAITLIGSWRPDVVLLDIQMPGGTG 63 Query: 63 LEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLE------------- 109 E++ + + P +F++A DE+A++AF+ A DYLLKP D+AR Sbjct: 64 FEVIDAVGVDRMPATLFISAHDEFALQAFDVAAVDYLLKPFDDARFAIAWRRLTDRVATG 123 Query: 110 ------KTLARLRQERSKQDVSLL-PENQQALKFI--PCTG------------HSRIYLL 148 + L L R D S L P A P G R ++ Sbjct: 124 AVLEQARILGALLSARGGNDTSALSPAGGTATSTTARPTGGAPRFADRIVVKHDQRTMVV 183 Query: 149 QMKDVAFVSSRMSGVYVTSHEGKEGF-TELTLRTLESRTP---LLRCHRQYLVNLAHLQE 204 + DV ++ S G YV H GKE + TL ++ESR LR HRQ +V++ ++E Sbjct: 184 MLADVQWIES--DGNYVVLHAGKERYQVRETLTSIESRLDPRRFLRIHRQTIVDMRAMKE 241 Query: 205 IRLEDNGQAELILRNGLTVPVSRRY 229 ++ G +ILR+G + VSR Y Sbjct: 242 LQPWFGGDQIMILRDGTRLRVSRNY 266 >UniRef50_D0MDS1 Two component transcriptional regulator, LytTR family n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MDS1_RHOM4 Length = 275 Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 99/279 (35%), Positives = 144/279 (51%), Gaps = 44/279 (15%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRP---DVLFLDIQM 57 M+++LIVDDEP AR LR L+ V A +G+ A+ KL+ D+L LD++M Sbjct: 1 MLRILIVDDEPPARRRLRKLLEPLRASGRVAAIEEAADGVEALEKLQQQTFDLLLLDVRM 60 Query: 58 PRISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ 117 P + G E++ +DP RP++VF TA+D+YA+KAFE HA DYLLKPI++ RL + +AR+ Q Sbjct: 61 PELDGFEVLERIDPNRRPFVVFTTAYDDYALKAFEAHAIDYLLKPINQERLLEAVARVEQ 120 Query: 118 -----------ERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT 166 ER + + L QQ + P G + YL Q+ V++ R+ + VT Sbjct: 121 LQTTAQLREQEERLSRLLDWLESQQQ--QAAPAPGPATSYLEQLS-VSY-RDRILIIPVT 176 Query: 167 ---SHEGKEGFTEL--------------------TLRTLESR-TP--LLRCHRQYLVNLA 200 S E +G T L TL LE+R P +R HR +V L Sbjct: 177 RLVSAEIHDGITRLYVLEEEPGAPPRLRQHVVSYTLDQLEARLNPHDFMRVHRSAIVQLR 236 Query: 201 HLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL 239 H++E+ +G+ +L L V SR K LKE + L Sbjct: 237 HIRELIPWFSGRYKLKLTGDHEVIASRERSKLLKERLVL 275 >UniRef50_A4AS29 Two-component system, regulatory protein n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4AS29_9FLAO Length = 240 Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 80/230 (34%), Positives = 130/230 (56%), Gaps = 9/230 (3%) Query: 3 KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 K +I+DDE LARE ++ L++ + EI+GE S+ E I A+ +L PD+LFLDI MP SG Sbjct: 5 KTIIIDDERLAREEVKRALEKHQEFEIIGEASHVDEAIAAIEELEPDILFLDIHMPGKSG 64 Query: 63 LEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSKQ 122 +++ L P +VF TA+D+YA+KAFE +A DYL+KP+ + R KT+ +++ E SK+ Sbjct: 65 FDLLEELTK--VPNVVFTTAYDQYAVKAFEMNALDYLVKPLRDERFSKTIEKVKTELSKR 122 Query: 123 DVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEG-KEGFTELTLRT 181 V+ P + I + + + D+ F+ S + Y + G + + +L Sbjct: 123 -VTSEPRTLSMHQKIFIKDGENCHFIPLSDIHFIESLDN--YARLYFGLDKAMIKRSLNL 179 Query: 182 L-ESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRR 228 L E P R +R ++N+ +++EI N + ++IL G V VS R Sbjct: 180 LAEKLDPKVFFRVNRSQIINIHYIKEIHPYFNNKLQIILTTGEKVEVSSR 229 >UniRef50_B0TBI1 Sensory transduction protein lytt n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TBI1_HELMI Length = 238 Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 80/239 (33%), Positives = 132/239 (55%), Gaps = 14/239 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +KV+I +DEPL+RE L L++ D+E+ N E + + +P ++FLDI+MP ++ Sbjct: 1 MKVMIAEDEPLSREELEYLLRQAEDVELCPSARNGKELLRLQKEHQPQLIFLDIEMPELN 60 Query: 62 GLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+E V L + P I+F TA+++YA++AF A DYLLKP+DE RL ++L R RQ Sbjct: 61 GVEAVRQLAEASAPPLIIFTTAYEQYAVEAFGLRALDYLLKPVDEERLFESLQRARQRLQ 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF-TELTL 179 + P + I ++ +++ + + + V + G+ F T LT+ Sbjct: 121 ESAPPKTP-----ISNILLEEGDKLIVVKPERIYYAEKEERRVVIYCDRGR--FETRLTM 173 Query: 180 RTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILR--NGLTVPVSRRYLKSL 233 + L+ + P +RCHR +LVNL ++ EI NG +IL+ G +PVSR K++ Sbjct: 174 QELQDKLSGHPFVRCHRSFLVNLDYVDEIEPWQNGTYNIILKGIGGTKLPVSRSAAKNV 232 >UniRef50_Q03GB5 Response regulator of the LytR/AlgR family n=7 Tax=Lactobacillaceae RepID=Q03GB5_PEDPA Length = 243 Score = 126 bits (317), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 79/243 (32%), Positives = 131/243 (53%), Gaps = 6/243 (2%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K+LIVDDEPLAR L L+ ++ V E E + +PD++FLDI++ + Sbjct: 1 MKILIVDDEPLARSELDFLLRNNPLVDSVSEAEGVTEAKQKLMTDQPDLMFLDIRLDDGN 60 Query: 62 GLEMVGMLDPEH--RPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 G+ L E RPYIVF TA+D+YA+ AF+ +A DY+LKP ++ R+++TL R+ + Sbjct: 61 GMSFAKFLKKEEKLRPYIVFATAYDQYALDAFDVNATDYILKPFEKDRIDETLKRVDRIL 120 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 K + +L+ + + T R +++ D+ ++ ++ V + + ++ TL Sbjct: 121 KKPE-ALVNSDMCKNPRLSVTVDERTIIIKKSDILYLEAQNGNVLIYTKNLPLISSKQTL 179 Query: 180 RTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEA 236 LE + LR HR +LVNL + E + N EL L NG + VSR Y+ K+ Sbjct: 180 INLEKQLDPEQFLRVHRSFLVNLDMILEFQPSFNHTYELTLINGTKITVSRSYVAKTKKV 239 Query: 237 IGL 239 +G+ Sbjct: 240 LGI 242 >UniRef50_C6W213 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W213_DYAFD Length = 260 Score = 126 bits (316), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 82/237 (34%), Positives = 134/237 (56%), Gaps = 22/237 (9%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSD-IEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 +K +++DDEPLA LR L++ +D IV E N EG+ + + PDV+FLDI+MP + Sbjct: 5 LKTILIDDEPLALSRLRRLLEKHTDTFTIVSEAKNGAEGLVEIDRHHPDVIFLDIEMPLL 64 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR---Q 117 +G EM+ L P +VF TA+D+YAI+AFEE++ DYLLKP++ RL KT+ ++R Q Sbjct: 65 NGFEMLSKL--TRMPLVVFSTAYDQYAIRAFEENSVDYLLKPVENDRLMKTIEKIRNITQ 122 Query: 118 ERSKQDVSLLPENQQALKFIP-------------CTGHSRIYLLQMKDVAFVSSRMSGVY 164 + S P ++ L+ + TG RI L+ M ++ + V+ Sbjct: 123 AGNGHPGSFNPYSENLLRLLEEMKPKKEIFSLSVKTG-DRILLIPMTEITHFEAEEKYVF 181 Query: 165 VTSHEGKEGFTELTLRTLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN 219 + + +G++ TL +LE + P LR R +VN H++EI+ NG+ +++R+ Sbjct: 182 LNTLDGQKYLLNYTLTSLEEKLPKHYLRVSRAGIVNSHHIKEIQKHFNGKYVIVMRD 238 >UniRef50_C5CI41 Two component transcriptional regulator, LytTR family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CI41_KOSOT Length = 235 Score = 126 bits (316), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 73/242 (30%), Positives = 135/242 (55%), Gaps = 13/242 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IK ++VDDE +AR+ + +++ +IE++GE S+A E + + +P+V+FLDIQ+P + Sbjct: 3 IKAIVVDDEIIARKAIIELIEDYQNIEVMGEASSAEEALDIIKTKKPNVVFLDIQLPGFN 62 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+E V +L+ E + +VF++A+DEYA+ AFE A DYL+KP+ R T+ R+ + + Sbjct: 63 GVEFVELLNRLEEKVLVVFISAYDEYALDAFEVDAVDYLMKPVSPERFAVTVERIEKVLA 122 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 K+ V L+ +P + + ++ ++++ + S VY+ + E + L Sbjct: 123 KEGV---------LEKVPVKEDNLLEMVDLEEIFYFESMDKKVYLHTKEDELEVYRYNLS 173 Query: 181 TLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAE-LILRNGLTVPVSRRYLKSLKEAI 237 LES P R H+ ++VNL ++ ++ L L NG +P+ + Y +K+ + Sbjct: 174 ELESSLPSFFARVHKSFIVNLKKVRRFSSWPGSRSYFLTLSNGKEIPIGKNYKSKIKKLL 233 Query: 238 GL 239 L Sbjct: 234 HL 235 >UniRef50_B5JL04 LytTr DNA-binding domain family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JL04_9BACT Length = 255 Score = 126 bits (316), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 90/258 (34%), Positives = 137/258 (53%), Gaps = 25/258 (9%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ LI+DDE LARE L ++ I G+ S+ + + L+PD+LFLDIQMP ++ Sbjct: 1 MRALIIDDESLARERLATLIEADGRATIAGQASDGASALKQIAALKPDLLFLDIQMPELT 60 Query: 62 GLEMVGML-DPEHR-PYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEAR----LEKTLARL 115 G+++ L D E P I+F+TA+D +A+KAF+ HA DYLLKP D AR L+K LA Sbjct: 61 GIDVATALHDSEQNLPLIIFVTAYDAFALKAFDLHATDYLLKPFDRARFTAALDKALAAH 120 Query: 116 RQERS---KQDVSLL------PENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT 166 +Q S +Q +S L + L + RI L+ + DV ++++ + YV Sbjct: 121 QQRESSDIQQRLSALISDFHPKKTDTYLDRLSIKTEGRILLVPIGDVDYIAA--ANNYVE 178 Query: 167 SHEGKEGFTEL---TLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG 220 H G T L TL LE++ LR R +V + ++EI +G+ L L NG Sbjct: 179 VHVG--SVTHLMRETLSQLEAQLDPKNFLRISRSSIVAIDRIREIHPLFHGEHTLHLANG 236 Query: 221 LTVPVSRRYLKSLKEAIG 238 + +R Y +LK +G Sbjct: 237 QKLTATRSYRDALKPLLG 254 >UniRef50_A4E9X0 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9X0_9ACTN Length = 244 Score = 125 bits (315), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 82/242 (33%), Positives = 127/242 (52%), Gaps = 9/242 (3%) Query: 3 KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 +L+VDDEP R LR L++ + + + E N E + ++ +P+VLFLDI MP SG Sbjct: 6 NILVVDDEPPIRAELRYLLEKDTRVGQIAEAGNVTEAVESILSNKPNVLFLDITMPGRSG 65 Query: 63 LEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 +E+ L + + P +VF+TAF E+A A+ A DY++KP+++ARL K L ++ Sbjct: 66 IELAETLQNLKTPPVVVFVTAFAEFAADAYNLDAVDYVVKPVEDARLSKALDKIEAALGA 125 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 + V P +Q L+ G +++ + DV + +R EG E ++ + Sbjct: 126 RRVIHAP--RQPLRLTVDRGGKKVF-IPAADVCYFEARADFCNAICAEGTYLINE-SISS 181 Query: 182 LESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELIL-RNGLTVPVSRRYLKSLKEAI 237 LE R +R HR YLVNL + + + G EL L R TVPVSRR +K + Sbjct: 182 LERRLVSEGFIRVHRSYLVNLEDVHNVEIGSTGLMELRLDRVTSTVPVSRRRAAEVKAHL 241 Query: 238 GL 239 GL Sbjct: 242 GL 243 >UniRef50_Q025Y4 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q025Y4_SOLUE Length = 255 Score = 125 bits (315), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 79/239 (33%), Positives = 124/239 (51%), Gaps = 17/239 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+VL+ DDEPLAR +R L D+ +VGE N E + A+ L PD+LFLD+QMP + Sbjct: 7 IRVLVADDEPLARRGVRQLLAPHRDMTVVGEARNGRETLTAIDALSPDLLFLDVQMPEMD 66 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E++ P P +VF+TA D++A++AFE HA DYL+KP+ R E L R+R+ Sbjct: 67 GFEVLRARGPHRMPAVVFVTAHDQFAVRAFEAHALDYLVKPLRVDRFEAALHRVRERLRL 126 Query: 122 QDVSLLPENQQAL---KFIPCTGHSRIYLLQMKDVAFVSSRMSGV-----YVTSHEGKEG 173 + L AL K C + + ++ + + + Y H G + Sbjct: 127 MEAVDLAARLTALLETKREKCGVEWLVVPVATGELVIPVAEIDWIGADDYYACLHVGAKS 186 Query: 174 F-TELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRR 228 + +L +LE+R R HR +V + ++E+ + E++LR G+ V +SRR Sbjct: 187 YLLRESLASLETRLDPRRFARVHRSAIVQIDRIRELHGD-----EVVLRGGMRVALSRR 240 >UniRef50_A9DKT5 Two-component system regulatory protein n=1 Tax=Kordia algicida OT-1 RepID=A9DKT5_9FLAO Length = 240 Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 78/243 (32%), Positives = 130/243 (53%), Gaps = 11/243 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I +IV+D LAR L+ L++ S IE++ E N + ++ +P VLFLDI MP + Sbjct: 4 ITAIIVEDSRLARNELKELLKKHSQIELIAEAENVDKAYELINSKQPQVLFLDINMPEKN 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G +++ MLD + P +F TA+DEYAIK+FE +AFDYLLKPI++ R KT+ ++ K Sbjct: 64 GFDLLEMLD--NVPLTIFTTAYDEYAIKSFEYNAFDYLLKPINQTRFSKTIEKVIATIEK 121 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSH-EGKEGFTELTLR 180 + P FI +L+++ ++A + G Y + E + +L Sbjct: 122 EATDEKPFELHRQIFI--KEGENCWLIRISEIAVFE--IVGNYTRVYFENNKPLIYKSLN 177 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT-VPVSRRYLKSLKEA 236 +E++ P R +RQ ++NL H+ ++ NG+ ++ ++N + VSRR K+ Sbjct: 178 QIETKLPEETFFRANRQQIINLNHVDKVIPWFNGKLKVTIKNSSQEIEVSRRQSYKFKDI 237 Query: 237 IGL 239 G Sbjct: 238 FGF 240 >UniRef50_A3WHL3 Two-component response regulator n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WHL3_9SPHN Length = 260 Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 79/259 (30%), Positives = 135/259 (52%), Gaps = 23/259 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++V I DDEPLA + ++ D EIVG S+ E + + RPD+L LDI MP ++ Sbjct: 4 LRVFIADDEPLALRRVLRSVKSVDDTEIVGTASDGKEALAVIAATRPDLLLLDIMMPGLT 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR----- 116 G E++ LD + P ++F+TAFD +A+ AF + DY+LKP+D+ RL + + R R Sbjct: 64 GFELLEHLDEDQTPSVIFITAFDNFAVDAFAQGVVDYILKPLDDTRLAQAIERARERMEL 123 Query: 117 ---QERSKQDVSLLPE-NQQALKFIPCTGHSRIYL--------LQMKDVAFVSSRMSGVY 164 QER Q S L + N IP I++ ++++D+ ++ + + Y Sbjct: 124 DANQERFAQLRSALSQMNTDFSTAIPSPYERDIWVRENGVVRRVRVEDIDWIEA--ANDY 181 Query: 165 VTSH-EGKEGFTELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG 220 V+ H G + + ++R+L R + HR +V + + EI E L L++G Sbjct: 182 VSLHTAGGQYLADDSIRSLAKRLNPDQFFQVHRGAIVRIQAISEINREKFSAISLTLKSG 241 Query: 221 LTVPVSRRYLKSLKEAIGL 239 V VS+ + +++ +A+ L Sbjct: 242 ARVRVSKSFKRAVFDALKL 260 >UniRef50_A1ZP21 Response regulator of the LytR/AlgR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZP21_9SPHI Length = 263 Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 79/254 (31%), Positives = 129/254 (50%), Gaps = 28/254 (11%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IKVLIVDDEP+ARE + + L E + +++VGE SN E + + PD+LFLDIQMP ++ Sbjct: 3 IKVLIVDDEPIAREMINILLAEHTGLQVVGEASNGEEALKLIDTQTPDLLFLDIQMPGMT 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+ + + ++VF+TA+DEYA+ AFE +A DYLLKP + R +T+ +++ + + Sbjct: 63 GISLAQKFAGFY-GHLVFVTAYDEYALAAFELNAIDYLLKPFTKKRFHQTIEKVQSKFQQ 121 Query: 122 --------------QDVS---------LLPENQQALKFIPCTGHSRIYLLQMKDVAFVSS 158 QD S L+ N L ++I + + +V + Sbjct: 122 ASLNRVEDKLLQLAQDYSQLKAQVQPTLIDSNDTYLSRFVARQANKIVFIDIVEVEAIVG 181 Query: 159 RMSGVYVTSHEGKEGFTELTLRTLESR-TP--LLRCHRQYLVNLAHLQEIRLEDNGQAEL 215 + V H G + TL+ +R P LR HR Y++ + ++E+ NG+ Sbjct: 182 ASDYIEV-HHAGNKSLVNTTLQETAARLNPEDFLRIHRSYILPIRQIKEVVPHFNGEYFF 240 Query: 216 ILRNGLTVPVSRRY 229 +++NG R Y Sbjct: 241 VMKNGQKYKSGRTY 254 >UniRef50_Q26BE1 Response regulator, LytR/AlgR family n=3 Tax=Flavobacteria RepID=Q26BE1_9BACT Length = 251 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 79/253 (31%), Positives = 140/253 (55%), Gaps = 22/253 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQ-SDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 ++VLI+DDE AR L L+E +++E+VGE ++ +G+ + PD++FLDI+MP Sbjct: 1 MRVLIIDDEKRARHLLHTLLKEHLNEVEVVGEATDLQDGLKLIESTTPDLIFLDIEMPGE 60 Query: 61 SGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 SGLE++ + P +H+ I+F+TA+++YA++AF+ +A DYLLKPID L+ A+ R++ Sbjct: 61 SGLEIIKYIKPDQHQFQIIFVTAYNQYAVEAFKTNAIDYLLKPIDIEELKTAFAKARKQH 120 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSR------MSGVY--VTSHEGK 171 Q V+ + +Q + + +I + + F S G+Y V + +GK Sbjct: 121 HSQQVT--QQLEQLRRSVKHLSLDKIVMEVPRGYMFASHNDIIYFEADGMYTKVITTDGK 178 Query: 172 EGFTELTLR----TLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSR 227 L+ L + +CHR +LVNL H+ E+ D +++ N +P+S+ Sbjct: 179 TNLICKPLKHFVEQLATNDLFFKCHRSFLVNLKHITELVKHDGDY--IVMENQRHIPISK 236 Query: 228 ----RYLKSLKEA 236 ++LK ++E Sbjct: 237 SKRDQFLKVIEET 249 >UniRef50_Q21NI5 Response regulator receiver n=2 Tax=Alteromonadales RepID=Q21NI5_SACD2 Length = 265 Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 84/260 (32%), Positives = 143/260 (55%), Gaps = 33/260 (12%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ +IV+DEP+A ++ LQ IEIVGE N + + + ++PD++FLDIQMP ++ Sbjct: 9 LRTVIVEDEPIAMLQMKSMLQGCPTIEIVGEARNGKQALDVIQDVQPDLVFLDIQMPVLT 68 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL--RQER 119 G E++ L + P IVF TA++EYA++AF+ HA DYLLKP E RL K LAR+ R + Sbjct: 69 GFEVLKALQGDTLPLIVFTTAYEEYAVQAFDLHAVDYLLKPFSEERLNKALARVMERWQL 128 Query: 120 SKQDV--SLLPENQQALKFIPCTGH-----------------SRIYLLQMKDVAFVSSRM 160 +++D +LL QA++FI G + L+ ++ +V + Sbjct: 129 AEEDQKGTLL----QAVEFILNKGEGPSVSAGAEPKLAIKESGEVLLIPQTEIDWVDA-- 182 Query: 161 SGVYVTSH-EGKEGFTELTLR----TLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAEL 215 +G Y+ H +G+ T++ L+SR R HR +VN+ + ++ G++ L Sbjct: 183 AGDYMCIHSKGQTHIQRCTMKQLLEKLDSRR-FCRIHRSTVVNVDRITKVIPHTKGESFL 241 Query: 216 ILRNGLTVPVSRRYLKSLKE 235 +L G + VSR +++++ Sbjct: 242 MLDCGEKLKVSRNCREAIQQ 261 >UniRef50_C6PCY4 Two component transcriptional regulator, LytTR family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PCY4_CLOTS Length = 255 Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 76/252 (30%), Positives = 134/252 (53%), Gaps = 14/252 (5%) Query: 1 MIKVLIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 +++ L+VDDE A E L+ L + ++ IE++G N E + L+PDV+FLDI +P+ Sbjct: 2 ILRSLVVDDELPAIEGLKYLLSDYKNTIEVIGTAKNGTEAFDKILSLKPDVVFLDINIPK 61 Query: 60 ISGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE 118 ++G+ + + + P +VF+TA+D YAI+AFE A DYLLKPI+ RL KT+ ++ Sbjct: 62 LNGINVANNITSLDKVPLVVFVTAYDSYAIEAFEIGAIDYLLKPINPCRLNKTINKIVNM 121 Query: 119 RSKQDVSLLPENQQALKF------IPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 K D+ L + + F +P RI L+ ++ + + V V + Sbjct: 122 YDKPDMWQLYLDNETRFFEGQFHKLPVEKFGRIKLVDFNEIVYAEAMDGKVLVKTKNDIF 181 Query: 173 GFTELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG--LTVPVSR 227 + + T++ LE+R + R + ++VNL ++ EI G L++ + + VS+ Sbjct: 182 DYND-TMKNLENRLSESIFFRVQKSFIVNLNNILEILPWFKGTYWLVMDDDKKTKISVSK 240 Query: 228 RYLKSLKEAIGL 239 ++ LK+ GL Sbjct: 241 NKIRELKKIFGL 252 >UniRef50_A0Z2B9 Response regulator receiver domain protein (CheY-like) n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z2B9_9GAMM Length = 271 Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 86/270 (31%), Positives = 133/270 (49%), Gaps = 40/270 (14%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRP-DVLFLDIQMPRI 60 +KV +VDDEPLARE L L SDIE+ N E I + +L P DV+FLDIQMP + Sbjct: 1 MKVAVVDDEPLAREFLTQILNGSSDIEVTASYKNGREAITGL-RLDPVDVVFLDIQMPGL 59 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLAR------ 114 G E+V L + P +VF TA E+A++AF+ HA DY+LKP R+ +TL+R Sbjct: 60 GGFEVVQALQSDTMPLVVFATAHSEFAVEAFDLHAVDYILKPFSAERVYETLSRCATRLM 119 Query: 115 ---LRQERSKQDVSLLPENQQALKFIPCTGHS------------------------RIYL 147 + DV+ Q+ G S + L Sbjct: 120 ALSVDSAEDGPDVTDRTARQKGAVISAMGGQSGRVLDAANTITSMDVGKLAIKDGQQTTL 179 Query: 148 LQMKDVAFVSSRMSGVYVTSH-EGKEGFTELTLRTLESRTP--LLRCHRQYLVNLAHLQE 204 LQM ++ ++ + +G Y+ H G+ T++ L +R P +R HR +VNL+ ++ Sbjct: 180 LQMDEIEWIDA--AGDYMCVHASGQTHILRSTMKELVARLPDNFVRIHRSTIVNLSKVEV 237 Query: 205 IRLEDNGQAELILRNGLTVPVSRRYLKSLK 234 + G+A+L++ G + VSR + K ++ Sbjct: 238 VEGLPKGEAQLLIVGGGVLKVSRNFRKEIQ 267 >UniRef50_Q1D286 DNA-binding response regulator n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D286_MYXXD Length = 256 Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 86/253 (33%), Positives = 134/253 (52%), Gaps = 17/253 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +VL+ DDE AR ++ L E + + GE ++ + + V LRPD+L LD+QMP ++ Sbjct: 4 FQVLVADDEAPARAKVKRLLAEDARFALAGEATDGPQTLRQVGTLRPDLLVLDVQMPGLT 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEAR----LEKTLARLRQ 117 G E++ L PEH P ++F TA+D +A+ AFE A DYLLKP D R L+K A LR Sbjct: 64 GFEVLEALGPEHCPAVIFSTAYDAFALAAFEAQAVDYLLKPYDAERFGRALDKAHAVLRS 123 Query: 118 --ERSKQDVSLLPENQQALKFIPC------TGHSRIYLLQMKDVAFVSSRMSGVYVTSHE 169 + + SLL E +A P G + + L + DV +S+ V + + + Sbjct: 124 GMPDTARIQSLLAELGRAPAGRPLERLVVKVGEAWVP-LPLADVWHLSAEDKYVRLYTGQ 182 Query: 170 GKEGFTELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVS 226 G E TLR LE R + +R HR +VNL + + +G L+L++G +V +S Sbjct: 183 G-EHLVRQTLRALEERLDPSRFVRVHRGDIVNLDAVARLEPWSHGDGILVLKDGSSVVLS 241 Query: 227 RRYLKSLKEAIGL 239 R + ++ + GL Sbjct: 242 RTWREAFLQKWGL 254 >UniRef50_Q028U9 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q028U9_SOLUE Length = 258 Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 81/243 (33%), Positives = 129/243 (53%), Gaps = 17/243 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + VL+ DDE AR L L+++ I V E ++ + +H RPD++FLD++MP + Sbjct: 6 VGVLVADDEKPARRRLLDLLRQEPGIASVWEATDGEMAVEMIHCYRPDIVFLDVKMPELD 65 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR----- 116 GL ++ + P +F+TA+DE+AI+AFE +A DYLLKP + R ++R R Sbjct: 66 GLGVIDRVGIAAMPLTIFVTAYDEHAIRAFEANALDYLLKPYSDPRFRSAMSRARARLDE 125 Query: 117 ------QERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSH-E 169 ER KQ ++ N L+ I G L + +V + + +G+YV H Sbjct: 126 RGLREFAERVKQMLTPAVVNGPPLERIVVKGRGTTRFLDVTEVECIEA--AGMYVVLHTR 183 Query: 170 GKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVS 226 GKE +L +E++ LR HR +VNLAH+ + +G+ E+IL++G V +S Sbjct: 184 GKELLHRSSLSDMEAKLDPRNFLRIHRSAIVNLAHVGHLEAISHGEFEVILKSGKRVRLS 243 Query: 227 RRY 229 R Y Sbjct: 244 RTY 246 >UniRef50_Q1QCQ5 Transcriptional regulator, LytR/AlgR family n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1QCQ5_PSYCK Length = 247 Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 75/253 (29%), Positives = 135/253 (53%), Gaps = 21/253 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + V +V+DE LAR+ L L++ I +VGE + + + +++ +PD +FLDI++ + Sbjct: 1 MNVYVVEDEVLARQELIYLLKDTGKINVVGEADDIHQALWDINEKQPDAVFLDIELEGGN 60 Query: 62 GLEMVGMLDPEHRP-YIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GLE+ +P +VF+TA+DEYA+ AF+ A DY++KPID RL K + +L + S Sbjct: 61 GLELAKQFSNMKKPPMVVFVTAYDEYALNAFKLDAIDYIVKPIDRGRLIKAVEKLIKLGS 120 Query: 121 KQDVSLLPENQQALKFIPCTG------HS-------RIYLLQMKDVAFVSSRMSGVYVTS 167 +P ++ +K +P HS RI ++ KD+ ++ + Y+ + Sbjct: 121 ------VPNSENLVKPLPLPSTHNDKKHSITVKQADRIIIINTKDILYIGTENRQAYIQT 174 Query: 168 HEGKEGFTELTLRTLES-RTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVS 226 E K L + ++ ++ HR Y+VN + + N +IL++G + VS Sbjct: 175 LEKKYPTDTLLYKMMDKLGDNFIQVHRGYIVNTKQIAALEPWFNRTYLIILKDGSKIAVS 234 Query: 227 RRYLKSLKEAIGL 239 R Y+K++K+ +GL Sbjct: 235 RSYVKAVKQVLGL 247 >UniRef50_Q2S4J5 Response regulator n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S4J5_SALRD Length = 248 Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 78/249 (31%), Positives = 130/249 (52%), Gaps = 19/249 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ LIVDDEP AR ++ +L+E IE+ GEC I A+++ PD++FLD+QMP + Sbjct: 1 MRALIVDDEPPARSLIQEYLEEIGRIEVTGECGTGRAAIEAINETAPDLVFLDVQMPGLD 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G +++ +D P I+F TA+DEYAI+AFE A DYLLKP AR + + R + + Sbjct: 61 GFDVLERID--TLPDIIFSTAYDEYAIEAFEAGAVDYLLKPYTRARFQTAVERALERHDR 118 Query: 122 QD-------VSLLPENQQALKFIP----CTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEG 170 D +LL E + P +I + D+ +V + +G Y H Sbjct: 119 DDDAYADQLATLLQEAKAETDDSPERLYVRHGDKIIPVDPDDIRWVEA--AGDYSKLHTD 176 Query: 171 KEGF-TELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVS 226 + + + + + LE R T +R HR +++ + + + +G + +L +G TV VS Sbjct: 177 ETTYLSSMGIGALEDRLAPTRFMRVHRSHILAFPAIDYLYSDGSGGYKAVLDDGTTVRVS 236 Query: 227 RRYLKSLKE 235 R Y +++ Sbjct: 237 RSYAPEIRD 245 >UniRef50_Q0A576 Response regulator receiver protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A576_ALHEH Length = 243 Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 83/249 (33%), Positives = 128/249 (51%), Gaps = 25/249 (10%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++VL+VDDEP AR L + + +V E + + A + +PD++ LDIQMP + Sbjct: 1 MRVLVVDDEPWARRRLAEMVDAEQGHRVVAEAGTGEQALAATREHQPDLILLDIQMPGMD 60 Query: 62 GLEMVGMLDPEHR-PYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ--- 117 GLE+ + R P ++F+TA E+A+ AFE A DYLLKP+ RL LAR Q Sbjct: 61 GLEVARRIARRERPPGVIFITAHPEHALAAFEAKASDYLLKPVRPDRLRAALARAGQVNR 120 Query: 118 ------ERSKQDVSLLP-ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEG 170 R D +L + + +P RI+ L+ +D V H+ Sbjct: 121 AQLQGLRRPHADPGMLRCRTTRGERLVPL---DRIHSLRAED---------KYVVVGHDD 168 Query: 171 KEGFTELTLRTLESR--TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRR 228 E E +L+ LE R LR HR LV L LQ + + G+ +++L+ GL +PVSRR Sbjct: 169 GELLLEDSLKALEQRFADRFLRVHRSALVALDRLQALERDALGRHQVVLQGGLRLPVSRR 228 Query: 229 YLKSLKEAI 237 +L ++++A+ Sbjct: 229 HLPAVRDAL 237 >UniRef50_Q1IJW2 Transcriptional regulator, LytR/AlgR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJW2_ACIBL Length = 254 Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 72/244 (29%), Positives = 126/244 (51%), Gaps = 8/244 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+V+ VDDEP A + + ++E+ + +V ECS+A I ++ +LRP V+FLD+QMP + Sbjct: 6 IRVITVDDEPFALQRISRLVREEPSLSLVAECSSAASAIESICELRPQVVFLDVQMPEVD 65 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G ++ P++VF TA++EYA++AFE A DYLLKPI + R + +L+ + Sbjct: 66 GFGVLDAFQGPTLPWVVFTTAYEEYAVRAFEASAVDYLLKPISQERFSAAVGKLKTAANS 125 Query: 122 QDVSLLPENQQALKF--IPCTGHSRIYLLQMKDVAFVSSRMSGVY-VTSHEGKEGFTELT 178 S A ++ I + +L V +S+ +G Y + GK T Sbjct: 126 VGTSNARSGLDASRYERILIKTDGKFVMLDPGQVERISA--AGNYAIVYAAGKSYIIRET 183 Query: 179 LRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKE 235 + ++ R R +R +VNL+ +QE+ +G+ + G V ++R Y +L+ Sbjct: 184 MTRIQCRVDPRRFFRVNRSEIVNLSFVQELEPTCHGEYSITTIFGTKVTLTRTYRDALQR 243 Query: 236 AIGL 239 + + Sbjct: 244 MLSM 247 >UniRef50_Q317D4 Transcriptional regulator, LytR/AlgR family n=9 Tax=Desulfovibrionales RepID=Q317D4_DESDG Length = 270 Score = 123 bits (308), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 84/267 (31%), Positives = 142/267 (53%), Gaps = 29/267 (10%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ ++VDDEP AR+ + L +D+++ G +A + + + + +PD++FLDIQM + Sbjct: 3 IRCIVVDDEPPARDEMVYLLSRFADVQVAGTADSAEQALALIAQQKPDLVFLDIQMYGHN 62 Query: 62 GLEMV-GMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR---- 116 G +V +LD P +VF TA+D+YAI+AF+E+A DYLLKPI+E RL K+L R+R Sbjct: 63 GFYVVEQLLDYPEPPLVVFATAYDQYAIRAFDENAVDYLLKPIEEKRLAKSLDRVREALA 122 Query: 117 ----QERSKQDVSLLP--------------ENQQALKFIPCTGHSRIYLLQMKDVAFVSS 158 QE+ + + P + L + RI LLQ +V F+ + Sbjct: 123 ARTEQEQDSRTQTAPPLHDDIRLGRLLEQMGRRTVLTRVAVERGGRIVLLQPDEVFFIQA 182 Query: 159 RMSGVYVTSHEGKEGFTELT-LRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAE 214 + ++ + EG +T L+ LE + R R L+N+ H++E +G+ Sbjct: 183 QGKRIWAHTTEGMAPCHGVTNLQKLEEKLAGHDFFRATRGELINMQHVREFSPWMHGKYN 242 Query: 215 LILRN-GLT-VPVSRRYLKSLKEAIGL 239 +++ + G T + V+R +K KE +GL Sbjct: 243 IVMSDPGQTEITVNRSRVKDFKERLGL 269 >UniRef50_A4J8Q7 Response regulator receiver protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J8Q7_DESRM Length = 236 Score = 123 bits (308), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 80/244 (32%), Positives = 133/244 (54%), Gaps = 14/244 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++V++VDDE AR+ L L++ +DIE+ E + + + K RPD +FLDI MP Sbjct: 1 MRVVVVDDEAPARDELIYLLKQHADIEVAAEAEDVQSALQVIRKERPDAVFLDISMPDGE 60 Query: 62 GLEMVGMLDPE-HRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+E+ LD P +VF TA+D++A++AF +A DYLLKP E R+ +T+ +LR+ S Sbjct: 61 GMEVARQLDRWVEPPLVVFATAYDQHAVEAFTVNAVDYLLKPFSEERVAETIDKLRRLLS 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + + Q K I + I LL +++ F S + V + + + K TL+ Sbjct: 121 HK------KQNQLQKKIAVSDEDLIKLLNPEEIVFASRQGREVMIKTFD-KTYSVNYTLQ 173 Query: 181 TLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILR--NGLTVPVSRRYLKSLKE 235 LE+R P R H +LVN+ ++ I G +L+++ + VPVSR +K ++ Sbjct: 174 ALENRLGDLPFFRPHYSFLVNIDKIERIEPGFQGH-QLVMQDEDSSRVPVSRNGMKEIRR 232 Query: 236 AIGL 239 +G+ Sbjct: 233 LLGI 236 >UniRef50_C1ABW9 Two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1ABW9_GEMAT Length = 276 Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 80/268 (29%), Positives = 135/268 (50%), Gaps = 38/268 (14%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++V+I +DEPL R +LR L ++D+++VGE VE + +PDV+ LDI+MP Sbjct: 6 LRVVIAEDEPLPRASLRRLLAARADVDVVGEAEQGVEAQALIESCKPDVVILDIRMPERD 65 Query: 62 GLEMVG--MLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL---- 115 G+E+ + + + P IVF+TAFDEYA++AF+ HA DYLLKPID L++ LAR+ Sbjct: 66 GIEVAASVLANLDEPPAIVFVTAFDEYAVRAFDLHAVDYLLKPIDAEHLDRALARVFARI 125 Query: 116 -------------------RQERSKQDVSLLP-------ENQQALKFIPCTGHSRIYLLQ 149 ++ D +LL E +F Y ++ Sbjct: 126 VAQRSTGTSDGTSDGTSASTSTAARLDPALLTVLEELRIERALPQRFAVRDAKGGTYWVK 185 Query: 150 MKDVAFVSSRMSGVYVTSH-EGKEGFTELTLRTLE---SRTPLLRCHRQYLVNLAHLQEI 205 D+ +V ++ + YV H +G++ T++ + S T +R HR +VN+ +Q + Sbjct: 186 SADIDWVDAQSN--YVRLHAKGQQHLVRDTMKAFQQKLSATRFVRIHRSVIVNIDFIQRV 243 Query: 206 RLEDNGQAELILRNGLTVPVSRRYLKSL 233 +G+ + LR+G + S+ + L Sbjct: 244 EPHLHGEQIVTLRDGTRLRTSKSHGAGL 271 >UniRef50_Q023F4 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q023F4_SOLUE Length = 251 Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 83/250 (33%), Positives = 128/250 (51%), Gaps = 18/250 (7%) Query: 3 KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 ++LIVDDEPL R +R L + DIE+ GEC + E + + D++ LD+++P G Sbjct: 5 RLLIVDDEPLIRAGIRDGLSGRDDIEVAGECGSVSEAVDLLRSDEVDLVLLDVELPDGKG 64 Query: 63 LEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSKQ 122 +++ + P +VF+TA+D+YAI+AFE +A DYLLKP D++RL +L R+R + Sbjct: 65 FDVIRRVGTYRMPAVVFVTAYDKYAIQAFEVNAVDYLLKPFDQSRLLASLDRVRDRLAGA 124 Query: 123 DVSLL---------PENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGK-- 171 SL E Q + G R L+ + V ++ + + Y H G Sbjct: 125 GESLARRLEALIQSRETQWPQTLVVRQGE-RYDLISVTSVDWIEA--ANNYAVLHCGTVD 181 Query: 172 EGFTELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRR 228 F E TL +LE+R LR HR +VN A + + G EL LR G V R+ Sbjct: 182 HVFGE-TLASLETRLDPAKFLRVHRSVIVNSARIVAVHTMIGGVYELELRGGTRVKTGRQ 240 Query: 229 YLKSLKEAIG 238 Y +++ +G Sbjct: 241 YRDRIRKLLG 250 >UniRef50_A0LZC2 Two-component system response regulator containing LytTR DNA-binding domain n=1 Tax=Gramella forsetii KT0803 RepID=A0LZC2_GRAFK Length = 254 Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 75/257 (29%), Positives = 139/257 (54%), Gaps = 22/257 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K L++DDE LAR + L++ IE++GECSN I ++ +PD++FLDI M ++ Sbjct: 1 MKALVIDDEELARRRVLNLLEDVEKIEVIGECSNGRTAIERINTDKPDLVFLDINMKDMN 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E++ ++ +P ++F+TA+D YA+KAF+ AFD+LLKP + R KT+ ++ E +K Sbjct: 61 GFEVLKQVEISPKPIVIFVTAYDNYALKAFDAEAFDFLLKPFKDQRFFKTINKVL-ETTK 119 Query: 122 QDVSLLPENQ---------------QALKFIPCTGHSRIYLLQMKDVAFV--SSRMSGVY 164 + ++ E + +++ IP ++ L+ + ++ S + ++ Sbjct: 120 TEANVTFEKRLVEFFHEYSKGGLQLNSVQKIPVKQGNKTALVDPNHILYIQASGYYAEIF 179 Query: 165 VTSHEG--KEGFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT 222 V S + +E L+ L+S T +R HR + NL ++ EI D + + + +G Sbjct: 180 VDSKKYVLRESLNNLS-EILDSNT-FVRIHRSTIANLKYVNEIIHSDYSEIDAKMTDGKL 237 Query: 223 VPVSRRYLKSLKEAIGL 239 + VS+ + K E IG+ Sbjct: 238 LHVSKSHKKEFLEKIGI 254 >UniRef50_A4BK03 Transcriptional regulator n=1 Tax=Reinekea blandensis MED297 RepID=A4BK03_9GAMM Length = 253 Score = 122 bits (307), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 83/247 (33%), Positives = 130/247 (52%), Gaps = 20/247 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 + +LI DDEPL R +L+ L+ D +IV + +N E + + + RPDV FLDI+MP + Sbjct: 1 MNLLIADDEPLLRFHLQKALENVWPDADIVAQAANGEEALALIDECRPDVAFLDIKMPGL 60 Query: 61 SGLEMVGMLDPEH-RPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +GL++ L + +VFLTA+D+YA+ AFE A DYLLKP+DE RL KT+ RL+Q + Sbjct: 61 TGLDVALKLAQKGIETRVVFLTAYDDYAVAAFERGAIDYLLKPLDENRLVKTVERLQQLQ 120 Query: 120 SKQDVSLLP-------------ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT 166 ++ S P E L ++ + I ++ + +V F + V Sbjct: 121 AESSASTQPPQLDALVELVNRVERPGGLVWLNVQKGNAIKVIAVNEVRFFRAEDKYTTVV 180 Query: 167 SHEGKEGFTELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAEL-ILRNGLT 222 + + E +++R LE + T R HR +VN+ H+ D G E+ IL Sbjct: 181 T-DDDEFLMRMSIRQLEEQLDLTYFWRIHRSTVVNMQHVDRAERNDAGNYEVYILGRSKP 239 Query: 223 VPVSRRY 229 +PVSR + Sbjct: 240 LPVSRAH 246 >UniRef50_Q5R0R5 Response regulator of the LytR/AlgR family n=1 Tax=Idiomarina loihiensis RepID=Q5R0R5_IDILO Length = 240 Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 83/247 (33%), Positives = 138/247 (55%), Gaps = 25/247 (10%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++V+IV+DE AR L L + +EIV EC++A + I ++ L+PD++ LDI++ +S Sbjct: 10 LRVIIVEDEAPARSKLNTQLAQMEGVEIVAECADAPQAIHDINSLKPDLVLLDIELGELS 69 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G +++ + +H +++F TA+ +YA+KAFE+ A DYLLKP D +RL L R+ Sbjct: 70 GFDVLEAM--KHPCHVIFTTAYSQYAVKAFEKQALDYLLKPFDLSRLRHALERV------ 121 Query: 122 QDVSLLPENQQA----LKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL 177 +L + Q A ++F G +I +LQ D+ FV + G+ V +E + Sbjct: 122 ----VLAQPQAAEPATVQFTAKVG-DKIRILQSSDIRFVRAS-QGLVVAQCLEREHHLDD 175 Query: 178 TLRTLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILR-NGL--TVPVSRRYLKS 232 +L +L ++ P LR HR +VN H+ +I NG L+LR G+ T+ SRR Sbjct: 176 SLESLLNQLPSSFLRVHRNSIVNTQHIHQIEKWQNG--ALLLRFEGVNDTITTSRRGAAV 233 Query: 233 LKEAIGL 239 L++ + L Sbjct: 234 LRKYLNL 240 >UniRef50_D2QR47 Two component transcriptional regulator, LytTR family n=2 Tax=Flexibacteraceae RepID=D2QR47_9SPHI Length = 260 Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 77/229 (33%), Positives = 132/229 (57%), Gaps = 20/229 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSD-IEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 +K +++DDE LA LR L + D I+IVG+ N EG+ + L+PD++FLDI+MP + Sbjct: 5 LKTILIDDESLAVSRLRRLLGKHHDSIDIVGDAGNGAEGLTLIESLQPDLIFLDIEMPLL 64 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ--E 118 +G EM+ L P +VF TAFD+YAI+AFEE++ DYLLKPI+ RL +T+ ++R E Sbjct: 65 NGFEMLSRL--TTMPMVVFATAFDQYAIRAFEENSIDYLLKPIEAERLARTIQKIRTLVE 122 Query: 119 RSKQDVSLL-PENQQALKF------------IPCTGHSRIYLLQMKDVAFVSSRMSGVYV 165 R++ ++ P ++ ++ I +I L+ + D+A+ + V++ Sbjct: 123 RAEGAYPVMNPMSESVMRLLAQMQPKKEIYSISVKTGEKIKLIPLSDIAYFEAEDKYVFL 182 Query: 166 TSHEGKEGFTELTLRTLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQ 212 ++ +G++ T TL TL+ + P +R R +VN + E+ +G+ Sbjct: 183 STIDGQKFLTTYTLTTLDEKLPDTFVRISRSVMVNRHKISEVHRHFDGK 231 >UniRef50_C8P5Q7 Response regulator n=2 Tax=Lactobacillaceae RepID=C8P5Q7_9LACO Length = 245 Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 85/250 (34%), Positives = 132/250 (52%), Gaps = 19/250 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +KVLIVDDEPLA LR L +Q +++ V E + K PD++FLDI++ + Sbjct: 1 MKVLIVDDEPLALSELRFLLDKQPNVDQVVEADGVTAAKQQLAKEVPDMMFLDIRLEDGN 60 Query: 62 GLEMVGMLD--PEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKP-----IDEA--RLEKTL 112 G+ L P+ PYIVF TA+D+YA+ AFE A DY++KP IDEA R++K L Sbjct: 61 GMAFAKQLKERPDC-PYIVFATAYDQYALDAFEAQAVDYVMKPFEQGQIDEAVNRVQKLL 119 Query: 113 ARLRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 R + + VS Q A + + R ++Q + ++ + V + +E Sbjct: 120 DRSARTPGGRQVS----QQNANPRLSLSSDDRTLVVQKTAIYYIEAVKGKTKVVTD--RE 173 Query: 173 GFTELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRY 229 + L+ L ++ L+ HR Y+VNL ++E++ N L L NG VPVSR Y Sbjct: 174 IISSQALKKLYAQLDPGQFLQVHRSYIVNLNQVREVQPSFNQTYVLTLENGAKVPVSRSY 233 Query: 230 LKSLKEAIGL 239 + ++K A+G+ Sbjct: 234 VAAVKLALGI 243 >UniRef50_D2PNH6 Two component transcriptional regulator, LytTR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PNH6_9ACTO Length = 237 Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 77/243 (31%), Positives = 126/243 (51%), Gaps = 10/243 (4%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI+ LIVDDEP AR L L E D+E+V + + + + RPD +FLD+++P Sbjct: 1 MIRALIVDDEPPARARLERMLGEHPDVEVVAAVGDVPAAMRRLAQDRPDTVFLDVRLPGD 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G ++ +L RP +V TA+ ++A++AF+E A DYLLKP RL + LAR+R+ Sbjct: 61 DGFTLLELLGRSDRPAVVCTTAYADHAVRAFDERAVDYLLKPFSRERLAEALARVREHHR 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSH-EGKEGFTELTL 179 + P + IP G + I + ++ V V + + YV H + + TL Sbjct: 121 ----PVRPAGPAPARRIPVPGPTGIGFVDVRRVESVRAERN--YVRVHTDDRRVLLRATL 174 Query: 180 RTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEA 236 R +E R P +R +R +V + + E++ +G+ L L +G V R + ++ A Sbjct: 175 REMEDRLPGQEFVRVNRSVIVRIDRVVELQPLPHGEVALRLASGDQVVSGRSHAAVVRAA 234 Query: 237 IGL 239 +GL Sbjct: 235 LGL 237 >UniRef50_B3E2Y5 Two component transcriptional regulator, LytTR family n=1 Tax=Geobacter lovleyi SZ RepID=B3E2Y5_GEOLS Length = 251 Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 85/251 (33%), Positives = 135/251 (53%), Gaps = 25/251 (9%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I V ++DDE AR LR L++ ++EIVGE + A EG+ + +L+P +LFLDIQMP ++ Sbjct: 3 ITVFLIDDEAPARRELRYLLEQLPELEIVGEAATATEGLRLLRQLKPRLLFLDIQMPGLT 62 Query: 62 GLEMVGMLD--PEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 G+E+ +L PE RP +VF TA+ ++A+ AF AFDYLLKP+ RL KT+ ++R++ Sbjct: 63 GIELSQILQELPE-RPLVVFSTAYSQFAVDAFNLEAFDYLLKPVTLERLGKTIDKVRKQL 121 Query: 120 SKQDVS---LLPE----------NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT 166 + LPE +Q K +P S +++ + V + + + +Y T Sbjct: 122 AATPPGPERPLPEPPHDDRKWVAARQGSKILPIAPESIVFVRCTEAVTHIHT-ATRIYQT 180 Query: 167 SHEGKEGFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG--LTVP 224 SH T L+ R HR LVNL + EI +G +L++ + + Sbjct: 181 SH------TITALQEQLEPYAFFRAHRNSLVNLNCILEIIPWFSGSCKLVMNDPARTEIL 234 Query: 225 VSRRYLKSLKE 235 VSR + + LK+ Sbjct: 235 VSRYHARDLKK 245 >UniRef50_B9DL71 Two-component response regulator n=2 Tax=Staphylococcus RepID=B9DL71_STACT Length = 266 Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 86/267 (32%), Positives = 129/267 (48%), Gaps = 31/267 (11%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K LIVDDEPLAR L L + + E++ E E + + DV+FLDI + S Sbjct: 1 MKTLIVDDEPLARNELNYLLTQNGNFEVIDEAETIGETLEKLLYETYDVIFLDINLMDES 60 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR---- 116 GL++ + +H PYI+F TA D +A+KAFE A DY+LKP ++ R+ + + R+ Sbjct: 61 GLDLAEKIQKMKHPPYIIFATAHDTFAVKAFELDATDYILKPFEQDRINQAVTRVAAKLN 120 Query: 117 ------------QERSKQDVSLLPENQ-----QALK---FIPCTGHSRIYLLQMKDVAFV 156 QE S++ + +NQ ++K +P RIY+L K++ + Sbjct: 121 YSSSSNQQTTEPQESSEKVGETVRQNQFKPSEHSIKQPSVLPIEVDERIYVLNQKEIIAL 180 Query: 157 SSRMSGVYVTS----HEGKEGFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQ 212 S + + +E E R T LR HR ++N AH+Q I N Sbjct: 181 SVNNGKTTLHTLNRDYETTEPLNNYAKRL--DDTQFLRIHRSTIINQAHIQTIEHWFNYT 238 Query: 213 AELILRNGLTVPVSRRYLKSLKEAIGL 239 ++ L L V VSR Y+K K AIGL Sbjct: 239 YQVTLTGNLKVQVSRSYMKPFKAAIGL 265 >UniRef50_A5FJA4 Two component transcriptional regulator, LytTR family n=2 Tax=Flavobacteriales RepID=A5FJA4_FLAJ1 Length = 238 Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 76/248 (30%), Positives = 129/248 (52%), Gaps = 20/248 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K +I+DDEPLA E L F+++ +E+V +NA++ + +++ D++FLDIQMP S Sbjct: 1 MKCVIIDDEPLAVELLEDFVKKVDSLELVNTFNNAIDAVSFINQNNIDLIFLDIQMPHFS 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+E + + E +P ++F TA+ +YA++ F A DYL+KPI R K++ R +Q + Sbjct: 61 GIEFINTI--EKKPLVIFTTAYSDYAVEGFNLGAVDYLVKPIPFHRFLKSVVRAQQINNP 118 Query: 122 ----QDVS---LLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF 174 Q VS PE +Q F+ + + D+ F+ V + + + K Sbjct: 119 AAPVQAVSENVPAPEVEQDFMFVRAEYEN--VKMNFSDILFIEGLKDYVKIYTTDNKFTL 176 Query: 175 TELTLRTLE---SRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLK 231 T ++L LE S R HR Y++N+ H++ I Q +L + +P+S Y Sbjct: 177 TLISLIKLENLLSNKGFSRIHRSYIINIKHVKSI------QKNKVLISDKRIPISESYKN 230 Query: 232 SLKEAIGL 239 + E I L Sbjct: 231 AFFEKINL 238 >UniRef50_B9M2N5 Two component transcriptional regulator, LytTR family n=3 Tax=Geobacter RepID=B9M2N5_GEOSF Length = 251 Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 91/256 (35%), Positives = 128/256 (50%), Gaps = 25/256 (9%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IK IVDDE ARE LR LQ+ + +VGE + + + + P++LFLDI MP IS Sbjct: 3 IKAFIVDDETPAREELRYLLQQMEGVVVVGEAGSGSTALAGIREANPELLFLDIHMPGIS 62 Query: 62 GLEMVGMLD--PEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTL---ARLR 116 G+E+ +L P H P ++F TAF+ YA +AFE A DYLLKP R+ K + ARL Sbjct: 63 GIELAQLLAELPTH-PLVIFATAFENYACEAFEVEAVDYLLKPFTLERVAKAVSKAARLM 121 Query: 117 QER-SKQDVSLLPENQQALKFIPCTGH------SRIYLLQMKDVAFVSSRMSGVYVTSHE 169 + + DV+ + CTG RI + + F + V+V H Sbjct: 122 GSKLAPGDVTPTAGDGHE----GCTGKLPLYQGERIIPTSPERIVFAQADEGAVHV--HT 175 Query: 170 GKEGF-TELTLRTLES---RTPLLRCHRQYLVNLAHLQEIRLEDNGQAELIL--RNGLTV 223 + + + TL LES R +R HR +LVN H+ E NG L + RN + Sbjct: 176 ATDRYRSRSTLTELESKLARHGFVRVHRSFLVNTNHVLEAIPWFNGSFRLTMDDRNRTEI 235 Query: 224 PVSRRYLKSLKEAIGL 239 VSR + K LK ++ L Sbjct: 236 MVSRYHAKDLKRSLDL 251 >UniRef50_C1A6M9 LytT family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A6M9_GEMAT Length = 289 Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 82/283 (28%), Positives = 140/283 (49%), Gaps = 47/283 (16%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+VL+VDDE R LR L +SD++IVGE ++ VE + + LRPD++FLDI+MP +S Sbjct: 7 IRVLLVDDEEFNRLRLRDLLDAESDVDIVGEAADGVEAVEQIRALRPDLVFLDIRMPGLS 66 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL++V + + P VF+TA+D++A++AF A D+L+KP D+ R +TL R R+ Sbjct: 67 GLDVVRQVGVDLMPATVFVTAYDQHAVEAFRLAALDFLVKPFDDERFAQTLQRARKLVVM 126 Query: 122 QDVSLL---------------------PENQQA--------------------LKFIPCT 140 D++ + P+ A L+ I Sbjct: 127 NDLATMRARLLEVLAPSPVSAVVEGAAPDTTGAITGPGPGSGPGTGHGSGGGYLERIAVE 186 Query: 141 GHSRIYLLQMKDVAFVSSRMSGVYVT-SHEGKEGFTELTLRTLESRTP---LLRCHRQYL 196 I + + D+ ++ + SG Y G+ ++++LE R LR HR + Sbjct: 187 AQGTIKPVAVADIDYILA--SGPYAELVVAGRRHLVRESMQSLEDRLDPRRFLRIHRSVI 244 Query: 197 VNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL 239 V L ++ ++ G E++L+ G + VSR ++L+ +G+ Sbjct: 245 VRLDRVEGLKRGAGGDGEVLLKGGGRLRVSRTRREALERWLGI 287 >UniRef50_A0PY89 Sensory transduction protein lytT n=3 Tax=Clostridium RepID=A0PY89_CLONN Length = 236 Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 73/243 (30%), Positives = 137/243 (56%), Gaps = 12/243 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + ++VDDE +RE L+ F+++ S+I+I E +++E + + + +PDV+FLDI MP++ Sbjct: 1 MNCIVVDDEYPSREELKFFIKQASNIDIDEEFDDSIEALEYIQQNKPDVVFLDISMPKLD 60 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+ + +++ +++ +VF+TA+ E+AI+AFE AFDY+LKP E R+ TL RL S Sbjct: 61 GMSLAHIINEMDNKIIVVFITAYKEHAIEAFETEAFDYILKPYSEERIISTLKRLENLES 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSS--RMSGVYVTSHEGKEGFTELT 178 +++ + + +N+ AL+ ++ +L + D+ + + + + VY + E + Sbjct: 121 QKNDNCI-KNKIALR-----KDEKLKVLGISDICYCRADEKKTIVYTAIDDYIENCSISD 174 Query: 179 LRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT--VPVSRRYLKSLKEA 236 + R HR Y+VNL + EI N + L+ GL +PVSR + K+ Sbjct: 175 FYKKLPKKVFFRTHRSYIVNLDKITEIIPWFNNTYIIKLK-GLDEEIPVSRNKMNDFKQL 233 Query: 237 IGL 239 + + Sbjct: 234 MNI 236 >UniRef50_Q47XT5 Response regulator n=4 Tax=Gammaproteobacteria RepID=Q47XT5_COLP3 Length = 275 Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 85/271 (31%), Positives = 133/271 (49%), Gaps = 41/271 (15%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ +IVDDEPLA LR L + +IEI+ EC N E I L PD++FLDIQMP + Sbjct: 4 LRTIIVDDEPLALNLLRAKLNKVPEIEIIAECKNGREAIEKTMDLAPDLIFLDIQMPGVD 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL-----R 116 G ++ L + P ++F TAF++YA+ AF+ HA DY+LKPIDE R+ + ++R Sbjct: 64 GFGVIKKLQSDIVPLVIFTTAFEQYALDAFDVHAVDYILKPIDEERITRAVSRAIVRFET 123 Query: 117 QERSKQDVSLL-------------------------PENQQALKF-IPCTGHSRIYLLQM 150 +E ++ ++ +N+ L+ I I LL+ Sbjct: 124 EEETEHKSRIIGAIDTINERENSASSSQSSQGQSSLGQNKGNLEHKIIIKDRDDITLLKQ 183 Query: 151 KDVAFVSSRMSGVYVTSHEGKEGFTELTLRTLESRTPLL------RCHRQYLVNLAHLQE 204 D+ +V + +G Y H +G T + TL++ L R HR +VNL ++Q+ Sbjct: 184 ADIEWVDA--AGDYCCVH--AQGVTHIKRSTLKNLLDDLDPSIFKRVHRSTIVNLNYIQK 239 Query: 205 IRLEDNGQAELILRNGLTVPVSRRYLKSLKE 235 + G+ L L V VSR Y +K+ Sbjct: 240 VIPHTKGEYFLKLGEYDQVKVSRNYRDVIKD 270 >UniRef50_A6TN10 Two component transcriptional regulator, LytTR family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TN10_ALKMQ Length = 256 Score = 119 bits (299), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 81/254 (31%), Positives = 127/254 (50%), Gaps = 19/254 (7%) Query: 3 KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 K+LIVDDE AR NL L++ ++V E SN + IG + D++FLDIQ+ ++G Sbjct: 4 KILIVDDERPARLNLINSLKDYGQFQVVAEASNGEDAIGFCKENTVDIVFLDIQLQDMTG 63 Query: 63 LEMVGMLDPEHR-PYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 ++ L HR P I+F TA+++YAI+AFE A DYLLKPID+ R +KT+ +L QE+ Sbjct: 64 FDVANELMALHRVPKIIFATAYNQYAIEAFEYSAIDYLLKPIDDIRFKKTMEKLLQEKEV 123 Query: 122 QDVSLLP----------ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEG- 170 L + + + I ++++L + D+ F+ + V S G Sbjct: 124 HSEKALDKVKVLLEKHLDTEHKKQKITLEKEGKLFVLCINDIIFIETDERNTKVVSKRGI 183 Query: 171 ---KEGFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILR--NGLTVPV 225 E T R + R HR +L+NL + E+ N ++ +R +P+ Sbjct: 184 FISNVTMVEWTERL--EQYGFFRPHRSFLINLDEIDEVIPWFNHSFQVKMRGYGQGDIPI 241 Query: 226 SRRYLKSLKEAIGL 239 SR K K +GL Sbjct: 242 SRNKAKVFKGLVGL 255 >UniRef50_C1F8Y7 Response regulators of cell autolysis n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F8Y7_ACIC5 Length = 274 Score = 119 bits (299), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 84/273 (30%), Positives = 131/273 (47%), Gaps = 36/273 (13%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I +IVDDE LARE L+ L+ DI+I+ + +N +E + +H PD++FLD+QMP + Sbjct: 3 ITAVIVDDEQLAREELQYLLEGAGDIDILAQGTNGIEAVDLIHGHHPDLVFLDVQMPGLD 62 Query: 62 GLEMVGML----DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ 117 G ++ L + P I+F TAFD+YA++AF+ +A DYLLKP D R+ + + R R+ Sbjct: 63 GFAVLKKLLDSGSGQPLPQIIFATAFDQYAVRAFDVNAIDYLLKPFDRDRVLQAVERARK 122 Query: 118 ---------ERSKQD----------------VSLLPENQQALKFIPCTGHSRIYLLQMKD 152 ER + P +Q I +R+ L+ D Sbjct: 123 RLEENAPNGERPSGSQATPGTDPRLDTLLRLIEQGPAGRQPRGKIVIQAQNRLLLVDQSD 182 Query: 153 VAFVSSRMSGVYVTS--HEGKEGFTELTLRTLESRTP--LLRCHRQYLVNLAHLQEI--R 206 + F S + V + EG+ L LE P R HR Y+VN+ H++E+ Sbjct: 183 LCFASIDEGTITVATAAFEGQSRCRTLE-ELLEQLDPNLFWRAHRSYVVNINHIKEVVPW 241 Query: 207 LEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL 239 + + Q + R +PVSR + L+E L Sbjct: 242 FKSSYQLRMGDRKHTEIPVSRAQTRRLRELFNL 274 >UniRef50_C6W647 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W647_DYAFD Length = 248 Score = 119 bits (298), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 75/238 (31%), Positives = 130/238 (54%), Gaps = 14/238 (5%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQS-DIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 MIK +I+DDE E L L+ + + + CS+ +GI A+ + RPDV+FLDI+MPR Sbjct: 1 MIKCVIIDDENNCLEMLEWLLKTYAPGVSVAAMCSSGEKGIEAIREHRPDVVFLDIEMPR 60 Query: 60 ISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 ++G +M+ D H +VF TA+D++AIKAF+ A +YLLKPID L +T+ R+ ++R Sbjct: 61 MNGFDMLEKFDKLHFD-VVFTTAYDKFAIKAFKYSALNYLLKPIDPDDLIETIRRIEEKR 119 Query: 120 S---KQDVSLLPENQQALKFIP----CTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 S ++ + LL +N + +K P T + + +D+ + + + V G++ Sbjct: 120 SVPSREQIELLFQNVRQMKNTPQRIALTAGDGMIFVPTQDILYCEAESNYTSVVLVTGRK 179 Query: 173 GFTELTLRTLE---SRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSR 227 L+ ++ S R H YLVNL +++ + G +++ N + + +SR Sbjct: 180 VVVSKVLKDIDEALSGPDFYRVHNSYLVNLNRIKKFVRGEGGY--IVMDNDVAISISR 235 >UniRef50_C9LQT9 DNA-binding response regulator n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQT9_9FIRM Length = 256 Score = 119 bits (298), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 85/245 (34%), Positives = 136/245 (55%), Gaps = 15/245 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRP--DVLFLDIQMPR 59 IK+LI DDE AR L+ L +++IVGECSN + + K P D++FLDI+MP Sbjct: 9 IKILIADDELPARGELKYELSTIPNVKIVGECSNG-KSVLDFLKTHPNVDLIFLDIEMPV 67 Query: 60 ISGLEM---VGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR 116 ++GLE +G +D + IVF T + ++AI+AF+ AFDY+LKP DE R+ + + RL+ Sbjct: 68 MNGLETAKKIGEMDIPAK--IVFATGYGQFAIQAFDLEAFDYILKPYDEERIRRIVDRLQ 125 Query: 117 QERSKQDVSLLPENQQAL-KFIPCTGHSRIYLLQ-MKDVAFVSSRMSGVYVTSHEGKEGF 174 ++++ + P A + I R+ ++ ++++ F+ + S + Sbjct: 126 NRLAEREQNRAPGEITAFSQKISLQTIDRVVIINPVQEIVFICTEKSDCSLFYTTKGIIT 185 Query: 175 TELTLRTLES---RTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILR--NGLTVPVSRRY 229 +++TLR ES R H+ Y+VNL+ +QEI +DNG L + + VPVSR Y Sbjct: 186 SKITLRDSESLLEPVGFFRTHKGYIVNLSMIQEIHPQDNGTLLLSMDYFSRDKVPVSRHY 245 Query: 230 LKSLK 234 LK K Sbjct: 246 LKDFK 250 >UniRef50_B2I5K9 Two component transcriptional regulator, LytTR family n=16 Tax=Xanthomonadaceae RepID=B2I5K9_XYLF2 Length = 252 Score = 119 bits (298), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 87/253 (34%), Positives = 132/253 (52%), Gaps = 23/253 (9%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQ-SDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 M+++LI DDEPLARE LRV LQ Q +E+V E N + + +L PD++ +DI MP Sbjct: 1 MLRILIADDEPLARERLRVLLQAQMQHLEVVAEAENGEQVLHDCQRLNPDLVLMDIAMPG 60 Query: 60 ISGLEMVGMLD--PEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTL----- 112 I GLE L P P +VF TA+ ++A+ AF+ A DYL+KP+ RL L Sbjct: 61 IDGLETARYLRYLPAC-PAVVFCTAYGDHALSAFDVEAIDYLMKPVRAERLHAALKRVQT 119 Query: 113 ---ARLRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHE 169 RLR+ ++ D + P ++ + L+ + V ++ + V V HE Sbjct: 120 FVAGRLREPQTSCDET--PRTHLCVRI-----RGGLRLIPLDQVRYLQADEKYV-VICHE 171 Query: 170 GKEGFTELTLRTLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT-VPVS 226 E E +L++LE +R HR L+ A L E+R +GQ + +LRN +T + VS Sbjct: 172 QGEDLIEESLKSLEKEFSDRFVRIHRNCLIARAELTELRRCSDGQVQAVLRNVVTPLAVS 231 Query: 227 RRYLKSLKEAIGL 239 RR + L + + L Sbjct: 232 RRCVPLLCDQLRL 244 >UniRef50_Q04FG9 Response regulator of the LytR/AlgR family n=2 Tax=Oenococcus oeni RepID=Q04FG9_OENOB Length = 247 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 75/244 (30%), Positives = 132/244 (54%), Gaps = 11/244 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K+L+VDDEPLAR+ L L++ + V + + + + + + DV+F+DI + + Sbjct: 1 MKILVVDDEPLARDELSYLLKQNRLTDSVYQADSIGTAVDKLLQEKIDVIFIDISLNDEN 60 Query: 62 GLEMVGMLDPE-HRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR---Q 117 G ++ L H P IVF TAFD YA+KAF+ A DY+LKP +++R+ + L +++ + Sbjct: 61 GFQLANELKKLIHPPLIVFATAFDSYAVKAFDVDAVDYVLKPFEQSRVNQALEKVQAIFK 120 Query: 118 ERSKQDVSLLPENQ---QALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF 174 ++K+D SL + + K I T + +++ D+ + + G G+ Sbjct: 121 LQAKKDNSLTVNSHFGSEKTKIISITSDDKTKIIKQHDLIMATIK-DGALTLITNGQSYS 179 Query: 175 TELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLK 231 T +L L SR L+ HR +VN+ + E+ N +L L NG+ VPVSR ++K Sbjct: 180 TRQSLGWLLSRLNKNDFLQVHRSIIVNINSISELEPWFNHTYQLKLTNGMKVPVSRSFIK 239 Query: 232 SLKE 235 ++K+ Sbjct: 240 AVKK 243 >UniRef50_Q3CYS0 Response regulator n=8 Tax=Streptococcus agalactiae RepID=Q3CYS0_STRAG Length = 244 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 79/246 (32%), Positives = 130/246 (52%), Gaps = 12/246 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +KVL+VDDEP+AR L L + ++ E + + + + DV LDI + S Sbjct: 1 MKVLVVDDEPVARNELIYLLNKYDSNLVIAEAHDMATALAILLRETFDVALLDIHLRDDS 60 Query: 62 GLEMVGMLDPEHRP-YIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GL++ ++ +P ++F TA+D+YAI+AFE A DYLLKP + RL++ + R++ S Sbjct: 61 GLQLAEYINKMPKPPLLIFATAYDQYAIQAFEHDARDYLLKPYEFDRLKQAMDRVKGALS 120 Query: 121 K----QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTE 176 + V+ P +Q P T RIYL+ D+ + + M G + K + Sbjct: 121 TSTIIESVTSGPLFKQQY---PLTVEDRIYLVSADDILLIEA-MQGKLIIQTPDKNYEID 176 Query: 177 LTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSL 233 +L+ + + P +R HR Y+VN+ ++ I N +L L N +TVPVSR +K L Sbjct: 177 GSLQQWQDKLPSSQFVRVHRSYIVNINAIKTIEPWFNQTLQLHLCNKITVPVSRANVKPL 236 Query: 234 KEAIGL 239 K+ +G+ Sbjct: 237 KQMLGI 242 >UniRef50_B9TLS0 Positive alginate biosynthesis regulatory protein, putative n=2 Tax=Ricinus communis RepID=B9TLS0_RICCO Length = 238 Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 78/234 (33%), Positives = 127/234 (54%), Gaps = 11/234 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +++LIVDDE AR LR L +Q I+ V E ++ ++ + + RPD L LDI+MP +S Sbjct: 1 MRLLIVDDERPARAKLRHLLAQQDGIDAVEEAADGIDALERIASFRPDALLLDIEMPELS 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPID----EARLEKTLARLRQ 117 G+E+ L PE P +VF+TA++ YA +AF+ A DYLLKP D L + +L Sbjct: 61 GIELAASL-PEPAPLVVFVTAYERYACQAFDCDAIDYLLKPYDGDRLARALARLRKKLAA 119 Query: 118 ERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL 177 + + +L P + L + G +R+ +++ D+ ++ + + V + + G + Sbjct: 120 KVDGRPAALPPAPLEQL-LVSERGVTRV--VRVADIQWIETADNYVVLHTAAGSPLLRQ- 175 Query: 178 TLRTLESR--TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRY 229 TL L R +RCHR+ +A ++ + D G EL+LR G VP SR+Y Sbjct: 176 TLAGLVDRLGAGFVRCHRRAAAQVAWIERVVTLDKGDGELLLRGGARVPCSRQY 229 >UniRef50_B1ZSR0 Two component transcriptional regulator, LytTR family n=9 Tax=Bacteria RepID=B1ZSR0_OPITP Length = 246 Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 81/248 (32%), Positives = 127/248 (51%), Gaps = 12/248 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K L+VDDE LAR LR L D+EIVGE +N + + L PD++FLD+QMP S Sbjct: 1 MKALLVDDERLARNELRRLLGAFPDLEIVGEAANGRQARQLLATLTPDLMFLDVQMPGES 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+E++ L+P P ++F TAFDE+A+KAF+ +A DYLLKP+D ARL T + + Sbjct: 61 GMELLESLEPPV-PDVIFTTAFDEFAVKAFDLNALDYLLKPVDPARL-ATAMERLRAKRA 118 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSR------MSGVYVTSH-EGKEGF 174 E+ P ++++ + FV + G Y H + + Sbjct: 119 AAALPAGESGAKPNRAPLAAEDKVFVREGDRCWFVEVKSIRLLESEGNYTRVHFDQAQPQ 178 Query: 175 TELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLK 231 +L +E R R +R+ ++NLA + +I +G + L+ G V +SRR + Sbjct: 179 LFRSLNAMEERLDPKYFFRANRRQIINLAWIDKIEPWFSGGLLVHLKGGAKVELSRRQAQ 238 Query: 232 SLKEAIGL 239 +E + L Sbjct: 239 EFRERMSL 246 >UniRef50_Q0HP79 Response regulator receiver protein n=20 Tax=Bacteria RepID=Q0HP79_SHESM Length = 243 Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 77/244 (31%), Positives = 124/244 (50%), Gaps = 6/244 (2%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+K +IV+DE LARE L ++ S+I+IV + +E + DV+FLDIQ+P I Sbjct: 1 MLKAIIVEDEYLAREELEYLVKSHSEIDIVASFEDGLEAFKYLQDHEVDVVFLDIQIPSI 60 Query: 61 SGLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 GL + L H P++VF+TA E+A++AFE AFDY+LKP +E R+ L ++ Q Sbjct: 61 DGLLLAKNLHKSTHPPHVVFVTAHKEFAVEAFELEAFDYILKPYNEPRIISLLQKIEQVG 120 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 + A + + RI + + + + + YV + + ++T+ Sbjct: 121 RQAPKPQHEAASNASRTVNLVKGERIIVTPCEQIYYAEADEKLTYVYTRTDR-YVMQMTI 179 Query: 180 RTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKSLKE 235 SR P RCHR Y VN+ ++EI N + L + VPVSR +K+ ++ Sbjct: 180 SEFVSRLPAEGFFRCHRSYCVNINKIREIVPWFNSTYLIRLHDLSFEVPVSRSNIKAFRQ 239 Query: 236 AIGL 239 + L Sbjct: 240 LMRL 243 >UniRef50_C1A9K0 LytT family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9K0_GEMAT Length = 298 Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 51/119 (42%), Positives = 84/119 (70%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++VLIVDDE LAR+ +R LQ ++D+E+VGE + E +G + +L+PD++ LD+QMP + Sbjct: 3 VRVLIVDDEALARQRVRRLLQNEADVEVVGEAESGHEAVGLIRELQPDLVCLDVQMPGLD 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G ++ L+ H P ++F+TA+DE+A +AF+ HA DY+LKP+D R + R++R+ Sbjct: 63 GFGVLRELEGGHVPMVLFITAYDEHAQRAFDVHAVDYVLKPVDADRFRSAFDKARRQRA 121 >UniRef50_A8VV77 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VV77_9BACI Length = 249 Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 82/248 (33%), Positives = 132/248 (53%), Gaps = 14/248 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ ++VDDEP +R+ L L + +E+V + E + + K PD +FLDI+M + Sbjct: 6 IRTVVVDDEPYSRDELMYLLSKTDGVEVVAAAGSHDEALERILKHEPDAVFLDIEMGEKN 65 Query: 62 GLEMVGMLDPEHR-PYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GLE+ G+L + P IVF TA+ ++AI AF +A DY+LKP DE ++++ + R+ + Sbjct: 66 GLELAGILTKLAKPPQIVFATAYPDFAITAFRLNALDYVLKPFDEGQVQEAVNRILS--A 123 Query: 121 KQDVSLLPENQQALKFIPCTG-----HSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFT 175 Q S P N + + CT I+ L + ++ + V S +G E T Sbjct: 124 IQQESKPPANDGITQGV-CTKLAVHYDEVIHYLSPNAIDYIFREGNITKVVS-QGSEYET 181 Query: 176 ELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT-VPVSRRYLK 231 LTL+ L + R H+ YLVNL ++E+ NG +L L + T +PVSR Y+K Sbjct: 182 RLTLKDLSEKLKDYSFFRTHKGYLVNLNRVEEMTPWFNGACQLKLEHVDTQIPVSRNYVK 241 Query: 232 SLKEAIGL 239 L++ + L Sbjct: 242 QLRQELEL 249 >UniRef50_Q01YJ9 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01YJ9_SOLUE Length = 252 Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 81/248 (32%), Positives = 133/248 (53%), Gaps = 20/248 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +KVLIVDDEPLARE +++ L S +V E N E + + + +PD++ LD+QMPR+ Sbjct: 3 LKVLIVDDEPLAREGIKLMLGGDS---LVMEARNGREAVTKIREEKPDLVLLDVQMPRMD 59 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR----- 116 G +V + + P ++F+TA D+YA++AFE A DYLLKP+ E R AR R Sbjct: 60 GFGVVEAVGADKMPAVIFITAHDQYAVRAFEISAVDYLLKPVTEERFRTAFARARNRLRA 119 Query: 117 ---QERSKQDVSLL---PENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEG 170 E ++Q +++L +Q L + L + +V ++ + + YV H G Sbjct: 120 APGDESARQMLAVLDAIANPRQYLSRLAVRSGEGTLFLTIDEVEWIEAAQN--YVCVHAG 177 Query: 171 K-EGFTELTLRTLE-SRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVS 226 + + + + T+E S P +R HR Y+VNL H++ + + Q L L +G +P Sbjct: 178 QTKHLLHVAMNTMENSLDPERFVRIHRSYIVNLQHIKRLWTLPHRQYILELASGERLPSG 237 Query: 227 RRYLKSLK 234 R Y + ++ Sbjct: 238 RTYGEKIR 245 >UniRef50_Q21DS4 Response regulator receiver n=2 Tax=Alteromonadales RepID=Q21DS4_SACD2 Length = 261 Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 77/227 (33%), Positives = 117/227 (51%), Gaps = 21/227 (9%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I +IVDDE AR+ L+ L +I I+ +C N + AVH+L P V+FLDI MP++ Sbjct: 3 INAIIVDDEAHARQALQHLLGTYKEINIIAQCENGKTAVKAVHELEPQVMFLDIHMPKLD 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E++ +L + P VF+TA D+YAI+AFE +A DYLLKP+ E RL +T+ R+ Q + Sbjct: 63 GFEVLELLG-DAAPITVFITAHDDYAIQAFENNALDYLLKPVSEERLARTVERICQRIKE 121 Query: 122 QDVSLL--PENQQALKFIPCTGH--------SRIYLLQMKDVAFVSS------RMSGVYV 165 +++ PE +Q+ + + R+ + DV +S+ + YV Sbjct: 122 ANLTAQPNPEGEQSQRTTDVVQNYIQRQAPIGRVLVRDKGDVHVISTTNIIAIEAADDYV 181 Query: 166 TSH-EGKEGFTELTLRTLE---SRTPLLRCHRQYLVNLAHLQEIRLE 208 H G + L LE R HR ++NL +LQ I E Sbjct: 182 VIHVPGGTHIKQERLSRLEELLDPQQFCRIHRSTIINLDYLQGIETE 228 >UniRef50_Q87K77 Uncharacterized response regulatory protein VPA0021 n=17 Tax=Vibrionales RepID=Y4021_VIBPA Length = 263 Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 83/249 (33%), Positives = 132/249 (53%), Gaps = 26/249 (10%) Query: 4 VLIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 +I DDEPL R +L L E +++IV + ++ + + A+ + +PD+ FLDI+MP + G Sbjct: 7 AIIADDEPLLRHHLDKSLAEVWPELDIVAKVADGEQALLAIEQSQPDIAFLDIRMPVLDG 66 Query: 63 LEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTL----ARLRQ 117 + + L+ + P IVF+TA+D+YAIKAFE++A DYLLKPI +ARL+ T ARL Q Sbjct: 67 MSLAQKLNRLANPPLIVFVTAYDDYAIKAFEQNAADYLLKPISDARLQTTCERVKARLSQ 126 Query: 118 ERSK----QDVSLL--------PENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYV 165 S Q SLL P+ Q L++I T I+L+ DV + + V V Sbjct: 127 RGSDNSHVQMNSLLEQLQQLSAPQTPQYLQWIKATQGDDIHLIATSDVLYFKAEEKYVSV 186 Query: 166 TSHEGKEGFTELTLRT-----LESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILR 218 + +GK E +RT + P + HR +V ++ + ++ + G+ + Sbjct: 187 YAQQGKGEVQEYLIRTSLKELIGQLNPEQFWQVHRSSVVQVSKISKVNKDFAGRM-FVYV 245 Query: 219 NGLTVPVSR 227 +PVSR Sbjct: 246 GETKLPVSR 254 >UniRef50_A7HMG0 Two component transcriptional regulator, LytTR family n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HMG0_FERNB Length = 254 Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 83/271 (30%), Positives = 135/271 (49%), Gaps = 54/271 (19%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K +IV+DE L L L+E+ IE++G N EGI V +L+PDVLFLDI + Sbjct: 1 MKCVIVEDEKLLAMVLEKMLKEEG-IEVLGWADNVDEGIRLVDELKPDVLFLDINLGDKD 59 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE-RS 120 G ++ ++ H+PY+VF+TA+ EYA+KAFE +A DY+LKP+ RL+ + ++ + S Sbjct: 60 GFYLLSKIN--HKPYVVFVTAYSEYAVKAFERNAIDYILKPVSRERLKNAIDKVSKAIES 117 Query: 121 KQDVSLLPENQQAL--------------------KFIPCTGHSRIYLLQMKDVAFVSSRM 160 K+ L EN Q K IP + I L+ D+ Sbjct: 118 KK----LNENYQDFIEEKIRSMLERLSYDLSNLQKKIPIETENEIVLVNCDDIIL----- 168 Query: 161 SGVYVTSHEGKEGFTELTLR--TLESRTPL------------LRCHRQYLVNLAHLQEIR 206 + EG T + L+ L+++TPL +R H+ Y++++ +++I Sbjct: 169 -------FQASEGLTVVNLKQGILKTKTPLKEFEAKLSKDKFIRVHKSYIISINAVKKIL 221 Query: 207 LEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 G + L NG +PV R Y +++K+ I Sbjct: 222 KNYIGGLAIELINGNIIPVGRMYKENIKKII 252 >UniRef50_Q025M1 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q025M1_SOLUE Length = 247 Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 84/260 (32%), Positives = 134/260 (51%), Gaps = 34/260 (13%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M + +VDDE A + L LQ +EIVG N V I A+ PD+LFLDIQMP + Sbjct: 1 MFRAYLVDDELPAVKRLARLLQATGRVEIVGAEMNPVAAIEAIRVASPDILFLDIQMPGL 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ--- 117 +G +++ + E +P+++F TA+D+YA+KAFE ++ DYLLKP++ L++ L +L Q Sbjct: 61 TGFDLLARI--ERQPFVIFTTAYDQYALKAFEVNSIDYLLKPVEPEELDRALNKLEQFQN 118 Query: 118 ERSKQDVSLLPE---NQQALKFIPCTGHSRIYLLQMKDVA--FVSSRMSGVYVTSHEGKE 172 R D+ + E ++ +P R L++ + F R++ + +GK Sbjct: 119 ARGPVDLRGVLEALSRHAPVQRVPIRMGERTRFLEVGRITHFFTQGRLT---FAAADGKT 175 Query: 173 GFTELTLRTLESR---TPLLRCHRQYLVNLAHLQEI----------RLEDNGQAELILRN 219 + T+ LE + + R HR LVNL L+E+ RL+D + ELI Sbjct: 176 HAVDCTIAELEQKLGPSRFFRIHRGTLVNLDWLEELTPWFTGRMAARLKDEKRTELI--- 232 Query: 220 GLTVPVSRRYLKSLKEAIGL 239 V+R ++ LK +GL Sbjct: 233 -----VARDRVRLLKRHLGL 247 >UniRef50_A6G241 Response regulator receiver protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G241_9DELT Length = 239 Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 89/239 (37%), Positives = 131/239 (54%), Gaps = 18/239 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++VLIVDDE AR LR + + +E+ GE ++A + + R DV+ LDI MP +S Sbjct: 5 LRVLIVDDETPARRRLRRACERVAGVEVAGEATDAATLRRVLTRDRADVILLDIAMPGLS 64 Query: 62 GLEMV---GMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE 118 G+E+ G+ P I+F TA E+A++AF A DYLLKPI E L LAR+R Sbjct: 65 GIELAREPGL------PPIIFTTAHSEHALEAFRVDAVDYLLKPISEHALALALARVRAR 118 Query: 119 RSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELT 178 Q S+ + + TG S + + ++V+ ++S V V +G+E + + Sbjct: 119 VPTQTPSV---SHTPPRLATRTG-SLLRVFDAREVSHLAS-TDRVVVFWIDGQEMILDES 173 Query: 179 LRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLK 234 L TLE+R LR HR LVNL + +R +++G A L LR+G VPVSRR L +K Sbjct: 174 LNTLEARLRGHDFLRVHRSALVNLTFVSAMRFDEDGAA-LQLRDGTVVPVSRRLLPEVK 231 >UniRef50_C1AAX5 LytT family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AAX5_GEMAT Length = 272 Score = 116 bits (291), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 80/265 (30%), Positives = 139/265 (52%), Gaps = 35/265 (13%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ LIV+DEPLAR +LR +Q +E+VGE +N + + ++ +L+PDVLFLDI +P + Sbjct: 11 LRTLIVEDEPLARIHLRDLVQGSMALELVGEAANGRDAVQSIAQLKPDVLFLDIHLPELD 70 Query: 62 GLEMVGM-LDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GL ++ L P P++VF TA+D YA+ AFE A DYL+KP R E+ + RL + Sbjct: 71 GLAVLEQSLQP---PHVVFTTAYDGYAVHAFELGAADYLVKPFTRERFERAVVRLLARVA 127 Query: 121 KQDVS-----LLPENQQALKFI-----PCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEG 170 + D + PE ++ + +G +R+ + +++ R+ + V + E Sbjct: 128 QHDDAGAGDDAPPEGPALMERVRSLHHQSSGDARLRHVYVRE----RGRVLPIAVDTIER 183 Query: 171 KEGFTELTLRTLESRTPLL-----------------RCHRQYLVNLAHLQEIRLEDNGQA 213 E + + + R LL R HR + VNL H++ + D+G+ Sbjct: 184 LEADDDYVVLVVGGRRHLLTVPLSELLGRLDAGRFVRIHRSHAVNLDHVRAMLPADSGRW 243 Query: 214 ELILRNGLTVPVSRRYLKSLKEAIG 238 +++++G V SR + L+E++G Sbjct: 244 AVVMQSGERVLASRTGTRQLRESMG 268 >UniRef50_D2MJZ8 Transcriptional regulator, LytR/AlgR family n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MJZ8_9BACT Length = 260 Score = 116 bits (291), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 87/253 (34%), Positives = 129/253 (50%), Gaps = 23/253 (9%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++V++ DDE AR+ L L+ D+++VGE + E + + +PD+ LD+QMP + Sbjct: 5 LRVIVADDERPARQFLVTMLRSFDDVDLVGEAKSGNETMRLIEHTQPDLALLDLQMPEMD 64 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL +V L P + F+TAFDE+A+ AFE A DYLLKP+D RL KT+ R ER + Sbjct: 65 GLSIVRSLRHGRIPLVAFVTAFDEHAVSAFEIEALDYLLKPVDRDRLRKTIDRA-HERLE 123 Query: 122 QDV----------------SLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYV 165 +D P Q +F P IYLL + +A V S ++V Sbjct: 124 RDALAEQESDRQPGPADRDGPAPAGQYIDRF-PIRKQDDIYLLPVHHIASVVSEGELMHV 182 Query: 166 TSHEGKEGFT-ELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL 221 T+ GKE +T L+TLES+ LR R LVN+ +++I G + L N Sbjct: 183 TT-VGKERYTMNYRLKTLESKLDPKRFLRVGRGALVNVEAIRKITPMPGGSYLVTLMNTQ 241 Query: 222 TVPVSRRYLKSLK 234 + VSR + L+ Sbjct: 242 QLRVSRSQSRVLR 254 >UniRef50_B1YHS9 Two component transcriptional regulator, LytTR family n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YHS9_EXIS2 Length = 231 Score = 116 bits (290), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 82/245 (33%), Positives = 140/245 (57%), Gaps = 21/245 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ ++++DEPLAR+ LR + ++ ++++ E + E V L+PD++FLDI++ S Sbjct: 1 MRTILIEDEPLARDELRYHVV-RAGLDVIAETGHVGEAEQLVRTLQPDLVFLDIELIDGS 59 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE-- 118 GL++ L H P I+F+TA+D +A++AFE +A+DY+LKP D +R+ + + ++ ++ Sbjct: 60 GLDVAKRLQSMPHPPAILFVTAYDTHALEAFELNAYDYILKPYDPSRISRAIEKIMRKPA 119 Query: 119 -RSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL 177 ++ + L E+ + LK LL +DV ++ + SG + + Sbjct: 120 LKTPRIERLAVESGEQLK-----------LLSPQDVDYIVAE-SGKTKLVTRSESYPSND 167 Query: 178 TLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLK 234 TL+ LE + LR HR YLVNLA ++ I NG A I + VPVSR Y+K LK Sbjct: 168 TLQELERKLSGHRFLRVHRSYLVNLAAIEAIEPWFNG-AYTIKIQQIDVPVSRTYVKVLK 226 Query: 235 EAIGL 239 EA+G+ Sbjct: 227 EALGI 231 >UniRef50_UPI000178918B two component transcriptional regulator, LytTR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178918B Length = 264 Score = 115 bits (289), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 80/254 (31%), Positives = 126/254 (49%), Gaps = 22/254 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IK +I +DE LARE L L+++ DIE++ +N E + V +PDV+FLD+ MP + Sbjct: 4 IKTMIAEDERLAREELAYLLEQEPDIELLPHAANGRELLELVPLRQPDVVFLDVHMPELE 63 Query: 62 GLEMVGMLDPEH-RPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GL+ ML P IVF TA+DEYA++AF +A DYLLKP RL++TL R+R Sbjct: 64 GLQAARMLKASPISPLIVFTTAYDEYAVEAFGLNAIDYLLKPYSHMRLKETLQRIRSRIQ 123 Query: 121 KQDVSLLPENQQALKFIPCTGH----------------SRIYLLQMKDVAFVSSRMSGVY 164 + + E A++ P + L+ + + + + Sbjct: 124 EGNAFPKQEAHDAIQAAPYPSTEAAARSMRGKLLFDDGDKHVLVDPEAILYAVREERVIR 183 Query: 165 VTSHEGKEGFTELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL 221 V + EG+ ++ TL+ LE + R HR YLVN+ + E+ NG ++L+ Sbjct: 184 VWTAEGQRITSKSTLQELEEKLAGYSFFRPHRSYLVNVNWIAELSPWQNGAYNIVLKGEQ 243 Query: 222 --TVPVSRRYLKSL 233 +P+SR + L Sbjct: 244 RSMIPLSREAARDL 257 >UniRef50_B3JKI8 Putative uncharacterized protein n=3 Tax=Bacteroides RepID=B3JKI8_9BACE Length = 235 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 72/237 (30%), Positives = 128/237 (54%), Gaps = 13/237 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IK + +DDEP+A E + F Q +IE+ +N + GI V K++P++LFLDI+M I+ Sbjct: 3 IKCIAIDDEPMALEIISSFCQRHGNIELTV-FTNPIAGIEQVKKIKPNILFLDIEMEDIN 61 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G ++ D H ++F TA+ +YA+ FE +A D+L KP AR EK + + + ++ Sbjct: 62 GRDLAR--DLPHEVMLIFTTAYAQYALDGFELNAIDFLHKPFSYARFEKAVQKAIELQTL 119 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 Q +S P ++I + +Q+KD+ ++ S + V + ++++L+T Sbjct: 120 QQLSAQPTFTD--EYITLKVEYKNTNIQLKDILYIESMDNYVRIHLTSQPTLTSQMSLKT 177 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKE 235 L+ P +R H+ ++V + R+ E++L NG+ +PV R Y K LK+ Sbjct: 178 LQELLPEEKFIRVHKSFVVPIY-----RIASYTSKEILLYNGIKIPVGRSYSKYLKD 229 >UniRef50_B7IG84 Autolysin response regulator n=1 Tax=Thermosipho africanus TCF52B RepID=B7IG84_THEAB Length = 227 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 75/243 (30%), Positives = 130/243 (53%), Gaps = 20/243 (8%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHK-LRPDVLFLDIQMPR 59 MIKV I+DDE ARE+L+ + E +D EIVG C +VE K + DV+FLDI+MP Sbjct: 1 MIKVAIIDDEYYARESLKDLINEMTDFEIVG-CFESVEEFLKNKKNKKTDVIFLDIEMPS 59 Query: 60 ISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 I+G++ LD + IVF+TA+ EYA++AFE +A DYL KP+ E R +T+ R+ ++ Sbjct: 60 INGIKASKCLD---KYEIVFVTAYSEYAVEAFEVNALDYLTKPVSEIRFLETIKRIEEKL 116 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL-T 178 +++ + I ++ I L D+ + + + + + + Sbjct: 117 RTKNI---------INTIAAENNNEIIFLSFDDILYFEYFEKNIIAITEDNEFVIKHYKS 167 Query: 179 LRTLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEA 236 L +LE P +R H+ Y++NL +++ E L ++N +P+ + +LK +K+ Sbjct: 168 LGSLEKDLPQNFVRIHKSYIINLNFIEKFIKE---PISLEMKNKKLLPIGKTHLKEVKKI 224 Query: 237 IGL 239 + + Sbjct: 225 LKI 227 >UniRef50_Q182U2 Two-component response regulator n=5 Tax=Clostridium RepID=Q182U2_CLOD6 Length = 256 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 77/254 (30%), Positives = 130/254 (51%), Gaps = 24/254 (9%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ +IV+DE AR+ LR F++ +S IE+V E +N +E + + + + DV+FLDI +P + Sbjct: 1 MRAIIVEDEFPARKELRYFIENKSGIEVVSEFTNGIEVLDFIQENKIDVIFLDINIPHLD 60 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+ + L+ + RP IVF+TA++ YA+ AF FDY+LKP E R+ L +L ++ Sbjct: 61 GMLLAKTLNQFKSRPKIVFITAYESYAVDAFSLDVFDYILKPYSEERIISMLNKL-EKSE 119 Query: 121 KQDVSLLPENQQALKF---------------IPCTGHSRIYLLQMKDVAF--VSSRMSGV 163 D+ L N K+ I ++ ++ + D+ + + R + + Sbjct: 120 MSDIELSNVNSNLYKYKKEAVNQEIEEITHKISLWKGDKLVVIDIDDIYYCEANERQTFI 179 Query: 164 YVTSHEG--KEGFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG- 220 Y + KEG +E + L + R HR Y+VNL ++EI N L L+N Sbjct: 180 YTEKEKFILKEGISE--VENLINDKTFFRTHRSYIVNLTKVKEIIPWFNNTYILKLKNSD 237 Query: 221 LTVPVSRRYLKSLK 234 V VSR +K + Sbjct: 238 YEVTVSRSKVKEFR 251 >UniRef50_C0ZBJ6 Two-component response regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBJ6_BREBN Length = 242 Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 80/238 (33%), Positives = 123/238 (51%), Gaps = 10/238 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+V+I +DE LARE L L ++ D+E++ +N E + V PDV+FLD++MP + Sbjct: 3 IRVMIAEDERLAREELSYLLLQEGDVELLPYATNGRELLEMVDVHEPDVVFLDMKMPELE 62 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G + ML + P IVF TA++E+AI AF+ +A DYLLKP + RL +T+ R+R+ Sbjct: 63 GAQAARMLASRKQHPLIVFCTAYEEFAIDAFKLYAVDYLLKPTEPKRLVETMQRIRERLV 122 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 K V P + K + +SR+ ++ + + V + + T +TL Sbjct: 123 KPKVE--PVQTKRTKLL-VEDNSRLVVIDPTTIVYAVREERYVQIVTQTATYS-TRMTLT 178 Query: 181 TLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG--LTVPVSRRYLKSL 233 L + R H+ YLVNL + E+ NG LIL+ +PVSR K L Sbjct: 179 QLAEKLFAYDFFRTHKSYLVNLQFVSELEPWFNGAYNLILKGEGRPRIPVSRTSAKDL 236 >UniRef50_A3M1E2 Alginate biosynthesis regulatory protein n=20 Tax=Moraxellaceae RepID=A3M1E2_ACIBT Length = 246 Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 90/248 (36%), Positives = 136/248 (54%), Gaps = 17/248 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +KVLI DDEPLA E L + + E+V + + + PDV+ LDIQMP ++ Sbjct: 1 MKVLICDDEPLAVERLSRLVSKMGH-EVVATAHHGQDALEQARLHHPDVILLDIQMPGMN 59 Query: 62 GL---EMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE 118 GL E + L+P RP IVF TA+D++A++AF+ A YLLKPID LE+T +L Q Sbjct: 60 GLVCAEQLSQLNP--RPAIVFCTAYDQHALEAFKSQAQAYLLKPIDPQELEQTFKQLTQL 117 Query: 119 RSKQDVSL-LPENQQALKF----IPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 Q +L PE Q LK I + + L+ ++++ + + V V H+ Sbjct: 118 TQAQLSALPKPELLQDLKTQRHQIAAKTYRGVELIPVENIYYFLADQKYVTV-RHKNGSV 176 Query: 174 FTELTLRTLESR--TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT--VPVSRRY 229 + TL+ LE+ +R HR LV++A+L + L +GQ ++ LR GL + VSRR+ Sbjct: 177 LIDETLKELETEFADQFIRIHRNALVSIAYLDGLELVSSGQYQVRLR-GLDERLSVSRRH 235 Query: 230 LKSLKEAI 237 L +L+E I Sbjct: 236 LSTLRERI 243 >UniRef50_A0M3D4 Two-component response regulator containing LytTR DNA-binding domain n=4 Tax=Bacteroidetes RepID=A0M3D4_GRAFK Length = 237 Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 70/240 (29%), Positives = 129/240 (53%), Gaps = 13/240 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ +IVDDE +A + + L + +IE+VG C NA E + + D++FLDI MP IS Sbjct: 5 IRCVIVDDENVALDIMENHLSKIDNIELVGRCKNATEAFNMISSNKTDLVFLDINMPGIS 64 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+ ++ + I+F TA+ EYAI F+ HA DYLLKPI RL + ++ Sbjct: 65 GISFAKSINKNIK--IIFTTAYREYAIDGFDLHAVDYLLKPISFDRLLDAVHNFQEVHLD 122 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 Q+ L +N+++ FI +++ + + ++ S + + + EG + T T+ + Sbjct: 123 QN-DLEVQNKKSGDFIFVKIDRKMHKIDFSGILWIESLSDYLKIETSEGTK-VTRETISS 180 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIG 238 +E++ P LR HR +++ + + +E E++++N ++P+SR Y + + +G Sbjct: 181 IETKLPETKFLRVHRSFIIAIDY-----IESYSNEEVVIQNK-SIPISRTYKDEVLKCLG 234 >UniRef50_Q8EQQ3 Sensory transduction protein lytT n=1 Tax=Oceanobacillus iheyensis RepID=LYTT_OCEIH Length = 246 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 78/246 (31%), Positives = 129/246 (52%), Gaps = 17/246 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I ++I +DE LARE L LQ+++DI + N + + + P+V+FLDI MP I+ Sbjct: 3 IHIMIAEDERLAREELMYLLQQENDIILCPSAENGDQLLNLYQEYNPNVIFLDIHMPGIN 62 Query: 62 GLEMVGMLDPEHRP---YIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE 118 G+E+ + E I+F TA++ Y ++AFE A DYLLKP E R + + R+R+ Sbjct: 63 GIEVAKKIRNEFEDKDIIIIFTTAYESYGVQAFEIQATDYLLKPFSEERFKIAMNRIRKT 122 Query: 119 RSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVS--SRMSGVYVTSHEGKEGFTE 176 S + V + + + ++ ++ + F + R ++ S+E E T+ Sbjct: 123 LSTKKVR-----KPKVDKLVVNLDEKMMVIDPNQIGFAAREGRTVKIHFISNEVIE--TK 175 Query: 177 LTLRTLE---SRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN--GLTVPVSRRYLK 231 + L+ LE S P R HR YLVN+ ++EI NG L++++ T+PVSR K Sbjct: 176 MNLKELEEKLSGFPFYRPHRSYLVNMDCIKEITPWFNGAYNLVIKDLAESTIPVSRTAAK 235 Query: 232 SLKEAI 237 L +A+ Sbjct: 236 GLFDAL 241 >UniRef50_D2QK93 Two component transcriptional regulator, LytTR family n=5 Tax=cellular organisms RepID=D2QK93_9SPHI Length = 245 Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 84/252 (33%), Positives = 138/252 (54%), Gaps = 21/252 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K LI+DDE LAR LR L+ ++I+GE +NA E + + +L P++LFLDIQMP + Sbjct: 1 MKTLIIDDERLARNELRRLLENFPKVQIIGEAANADEALPMIEELEPELLFLDIQMPGKN 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E++ ++ + P ++F TAFDEYAIKAFE +A DYLLKP++ ARL + + R+ +E+ Sbjct: 61 GFELLQSIEGKT-PEVIFTTAFDEYAIKAFEYNALDYLLKPVELARLSEAIHRVEEEQHI 119 Query: 122 QDVS----------LLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSH-EG 170 + S +L EN Q + + +++ V S G YV + + Sbjct: 120 PEASGAGPIGISTKILGENDQVF----VKDGEKCWFVKLGKVRLFES--MGNYVRLYFDD 173 Query: 171 KEGFTELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSR 227 ++ +L LE R R +R++++NL +++I +G + LR G + +SR Sbjct: 174 QKPLVLKSLNALEDRLNPATFFRANRKHIINLQWIEKIEPWFSGGLLVTLRGGDKIEISR 233 Query: 228 RYLKSLKEAIGL 239 R K+ + L Sbjct: 234 RQAIRFKDLLSL 245 >UniRef50_A4C6V8 Two-component system, regulatory protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C6V8_9GAMM Length = 240 Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 76/239 (31%), Positives = 129/239 (53%), Gaps = 13/239 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IKV+IVDDE LAR L+ L + S IEI+ E NA E + + +PD +FLDI MP ++ Sbjct: 3 IKVIIVDDERLARNELKRLLAKHSQIEIIDEAKNADEAKEKIAEQKPDAIFLDIHMPGVT 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL--RQER 119 GLE+ L + I+F TA+D++A+ AF +A DYL+KP++ RL +++A+L R E+ Sbjct: 63 GLELAETLGDDVN--IIFCTAYDQFAVDAFSLNAMDYLVKPVNPERLAESIAKLEKRVEQ 120 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 +K+ SL +++ +K+ ++ ++Q+ ++ S + + + GK + +L Sbjct: 121 AKEKTSLPDDHKLMVKY-----GEKMRIIQLCEIIRFESIGNHAAIYTPHGK-AYLHSSL 174 Query: 180 RTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKE 235 +E + R R +V L + + L NG T+ +SRR LK+ Sbjct: 175 NKIEKKLDEANYFRASRSDIVRLDAITSMEQSIGYGLLATLTNGQTIEISRRQATKLKQ 233 >UniRef50_Q097A8 Response regulator of the LytR/AlgR family n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q097A8_STIAU Length = 259 Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 81/257 (31%), Positives = 131/257 (50%), Gaps = 25/257 (9%) Query: 7 VDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGLEMV 66 +DDE +AR++L L ++ +VGEC++ + + A+ + DVLFLD++M + G +++ Sbjct: 1 MDDERIARQSLLSLLAADPEVRVVGECASGPQAVEALRQHPVDVLFLDVEMAGMDGFQVL 60 Query: 67 GMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR--------QE 118 PE I+F+TA+D +A+KAFE HA DYLLKP D+ R + LAR + Q Sbjct: 61 RQAGPELSAAIIFVTAYDTHALKAFEVHALDYLLKPFDDERFARVLARAKEHVRNGRIQT 120 Query: 119 RSKQDVSLLPENQQALKFIPCTGH-------SRIYLLQMKDVAFVSS------RMSGVYV 165 ++Q LL P T R+ L + VAFV+ Y+ Sbjct: 121 LARQLAGLLGAAPPPPAAAPVTPPPEPPRYLERLVLKDVGRVAFVNVEEVDWLEAEDYYI 180 Query: 166 TSH-EGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL 221 H G+ +LR LE++ +R HR +VN+ ++E+R +G+ +ILR+G Sbjct: 181 QVHTAGQTHLIRQSLRELETQLDPRRFVRIHRSTIVNVERVKELRPLFHGEYHVILRDGN 240 Query: 222 TVPVSRRYLKSLKEAIG 238 + +SR Y L +G Sbjct: 241 QLKLSRSYRARLDALLG 257 >UniRef50_A8UEA9 Two-component system response regulator n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UEA9_9FLAO Length = 234 Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 74/242 (30%), Positives = 126/242 (52%), Gaps = 16/242 (6%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 +++ +I DDEP+AR+ L ++ E +E+ C NA E + + K + D+LFLDI MP++ Sbjct: 3 ILQCIIADDEPIARQILENYINEIPYLELKASCKNAFEVLEILQKEQIDLLFLDINMPKL 62 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SGL M+ L + +P ++ TA+ EYA++ FE DYLLKP R + + +++Q+ Sbjct: 63 SGLSMLRTL--QQKPNVIITTAYPEYALEGFELSVTDYLLKPFSIERFLQAVMKVQQKHD 120 Query: 121 ---KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL 177 K+ ++ E +Q F+ +I L + ++ + G Y+ K T Sbjct: 121 NSVKETITNSIEEEQISIFV--KSDKKIIKLDFDAIFYIEAY--GNYIKIFSDKMVLTPQ 176 Query: 178 TLRTLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKE 235 TL + P LR H+ Y VN HL +L D Q ++L N +P+ + Y K++ + Sbjct: 177 TLSDFIDKLPNNFLRVHKSYAVNFNHL---KLIDGNQ--IVLSNNAKLPIGKSYRKAILK 231 Query: 236 AI 237 I Sbjct: 232 KI 233 >UniRef50_Q1YSU3 Two-component system regulatory protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YSU3_9GAMM Length = 239 Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 80/243 (32%), Positives = 131/243 (53%), Gaps = 17/243 (6%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MIKVLIVDDE LAR L+ L ++SDIE+VGE N +E + H+ PD++ +D++MP + Sbjct: 1 MIKVLIVDDESLARIRLQRLLGKKSDIELVGEARNGLEAVQMAHQYLPDIVLMDVRMPEM 60 Query: 61 SGLE----MVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR 116 GLE + M+ P P ++F TAF+++A++AF+ AF YLLKPI + L+ L R Sbjct: 61 DGLEAARQIAKMIPP---PAVIFCTAFEDFALRAFDAKAFAYLLKPIKDNELDAALQRAA 117 Query: 117 QERSKQDVSLLPENQQALKFIPCT-GHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFT 175 Q P +++ L C+ H+ + L+ + + + + V + EG+ + Sbjct: 118 SATRAQLNGQTPSHRRHL----CSRTHNGLELVAAEHIRLLQADQKYVTAYTAEGETLLS 173 Query: 176 ELTLRTLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVP-VSRRYLKS 232 + TL+ +E +R HR LV ++ + + G + LR+ P VSRR Sbjct: 174 D-TLKDIEKEFSQFFVRVHRSALVARDAIEGLTYAE-GHLAVKLRDIAIQPIVSRRLEPK 231 Query: 233 LKE 235 L++ Sbjct: 232 LRQ 234 >UniRef50_A8F4Q4 Two component transcriptional regulator, LytTR family n=1 Tax=Thermotoga lettingae TMO RepID=A8F4Q4_THELT Length = 223 Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 75/239 (31%), Positives = 126/239 (52%), Gaps = 20/239 (8%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MIKV I++DE LAR+NL +++ S+ E+VG S E + + + DV+FLD+++ Sbjct: 1 MIKVAILEDEQLARDNLEQLIRKYSEFELVGSFSTGRELLRHLKDI--DVVFLDVRLSGE 58 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SGL++ + IVF+TA+ EYA++AFE +A DYL+KP+ E R + + ++ Q S Sbjct: 59 SGLDVSKKIKSTG---IVFVTAYPEYAVEAFEVNAIDYLVKPVSEERFSECVEKISQICS 115 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + +L +P I L+ KD+ F+ + + G+ + Sbjct: 116 R-----------SLAKLPVKDFDGILLIDFKDILFIEAFGKKCMACTINGEYEVYHWNIS 164 Query: 181 TLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 LE R P +R H+ Y+ NL H+++I Q E + N +PVS++Y K +K + Sbjct: 165 HLERRLPREFVRVHKSYICNLEHVKKILCSPCFQIE--MENSKLIPVSKKYQKFVKSVL 221 >UniRef50_Q8DVB7 Sensory transduction protein lytR n=3 Tax=Streptococcus RepID=LYTR_STRMU Length = 244 Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 76/246 (30%), Positives = 130/246 (52%), Gaps = 10/246 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIE--IVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 + +LI+DDE LAR+ L +Q+ +++ + E + + + + D++FLDI + Sbjct: 1 MNILILDDEMLARQELTFLIQQSKELDHPDIFEAEDISSAEKILFRQQIDLIFLDISLSE 60 Query: 60 ISGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR-- 116 +G + L+ H P +VF TA+D YA+KAFE +A DY+LKP ++ R++K LA+++ Sbjct: 61 ENGFTLANQLEQLAHPPLVVFATAYDHYAVKAFESNAADYILKPFEQGRVDKALAKVKKI 120 Query: 117 QERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTE 176 Q S D + E ++ ++ + T R +L+M D+ +S G S + + Sbjct: 121 QHLSTIDETATTE-KKGMELLTLTLADRSIVLKMPDIV-AASIEDGELTVSTKNTSYTIK 178 Query: 177 LTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSL 233 TL ++R L+ HR +VNL +QEI+ N L++ NG PV R Y+K L Sbjct: 179 KTLNWFKTRAKTNYFLQIHRNTVVNLEMIQEIQPWFNHTLLLVMVNGEKFPVGRSYMKEL 238 Query: 234 KEAIGL 239 + L Sbjct: 239 NAHLTL 244 >UniRef50_C1AAC5 LytT family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AAC5_GEMAT Length = 268 Score = 114 bits (284), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 84/262 (32%), Positives = 131/262 (50%), Gaps = 26/262 (9%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 +I+ LIVDDEPL R LR L DIEIVGE + + + L PD++FLDIQMPR Sbjct: 4 LIRALIVDDEPLGRRRLRDLLAASPDIEIVGESVDGTAAMADITALAPDLVFLDIQMPRG 63 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR---- 116 SGL++V + P+ P +F+TA D +A++AF+ A DYLLKP + R L R R Sbjct: 64 SGLDVVRAMGPDRMPITIFVTAHDAFALQAFDAAAVDYLLKPFSDERFADALKRARRLIA 123 Query: 117 ---------QERSKQDVSLLPENQ-------QALKFIPCTGHSRIYLLQMKDVAFVSSRM 160 Q RS D+ P + L+ I R+ ++ + + ++ + Sbjct: 124 LEDREQLHAQLRSLLDMPSPPADNLPVPNAPAYLERIAVQMRGRMRVVPVGQIDYIVA-- 181 Query: 161 SGVYVTSHEGKEGF-TELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELI 216 + Y H G E + +L+ LE R +R HR +V + + + + +L+ Sbjct: 182 NEPYAELHVGTERYLIRDSLQRLEERLDPARFIRVHRATIVRIDVIDTLLRGEGSDYQLV 241 Query: 217 LRNGLTVPVSRRYLKSLKEAIG 238 LRNG+ + V R ++L+ +G Sbjct: 242 LRNGVRLRVGRSRREALEALLG 263 >UniRef50_Q01R04 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01R04_SOLUE Length = 253 Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 119/219 (54%), Gaps = 16/219 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ LI+DDE RE LR L DI I GE + VE + + LRPD+LFLDI+MP ++ Sbjct: 1 MRSLIIDDEESGRERLRRMLAAHPDIVIAGEARDGVEAVQQIEALRPDLLFLDIEMPGLT 60 Query: 62 GLEMVGMLDPE-HRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ--- 117 G E++ L P P ++F+T +D++A+ A++ +A YLLKP++ RL + +AR R+ Sbjct: 61 GFEVLQALPPGVSLPLVIFVTGYDQHALAAYDANALAYLLKPVEADRLAQAVARARKLHG 120 Query: 118 -----ERSKQDV-SLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGK 171 R+ +++ + E + L+ I C RI L+ + + + ++ V +H Sbjct: 121 TPGEPARAGENILRVARETPRNLRQIVCRKRDRILLVPPEQILWF--QVEDGLVKAHTAA 178 Query: 172 EGF-TELTLRTLES---RTPLLRCHRQYLVNLAHLQEIR 206 E F L LE+ R R+ LVNL+ ++EI+ Sbjct: 179 ETFWVNYQLNELEAGLDSALFFRARREVLVNLSCIKEIK 217 >UniRef50_B9E9A6 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E9A6_MACCJ Length = 236 Score = 113 bits (282), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 75/243 (30%), Positives = 125/243 (51%), Gaps = 13/243 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +++LIVDDEPLAR LR L + +V E + E + ++ ++LFLDI + S Sbjct: 1 MRILIVDDEPLARNELRYLLNNIDNTLVVDEADSVEETLTSLLSETYELLFLDINLIDES 60 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GLE+ ++ +H P IVF TA D +A+KAFE +A DY+LKP ++ R+E L + Sbjct: 61 GLELAEKINKMKHPPKIVFATAHDSFAVKAFELNALDYILKPFEQKRIEAAL-------N 113 Query: 121 KQDVSLLPENQQA-LKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 K S + NQ++ L + +IY++ ++D+ + + + + + E L Sbjct: 114 KAKASSINTNQESKLPTLSIQIDDKIYVINIQDIIALYVEEGQLNIITVNSEYAIHE-PL 172 Query: 180 RTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEA 236 E + P +R HR ++N H++ N ++ L + + VSR Y+K K Sbjct: 173 SAFEKKLPENVFMRIHRSSIINKHHIKSAEQWFNHTYQVQLTKDIKLQVSRSYIKQFKHE 232 Query: 237 IGL 239 IGL Sbjct: 233 IGL 235 >UniRef50_B2V8S8 Two component transcriptional regulator, LytTR family n=3 Tax=Sulfurihydrogenibium RepID=B2V8S8_SULSY Length = 245 Score = 113 bits (282), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 71/217 (32%), Positives = 118/217 (54%), Gaps = 18/217 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + V IV+DEP+ARE L L+E ++ IVG + + + + DVLFLDI++P + Sbjct: 1 MNVFIVEDEPIARERLIRLLKEIGNVNIVGVADSKEKALSEMKDKEIDVLFLDIKLPDGT 60 Query: 62 GLEMV-----GMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR 116 GLE+ GM +P PYI+F TA ++A+ AF+ +A DYLLKP + +EK L +++ Sbjct: 61 GLEIAKEVIEGMDNP---PYIIFATANGDFALDAFKANAIDYLLKPFTKEDVEKALEKIK 117 Query: 117 QERSKQ----DVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 +K ++ + N + L IP S+I LL+ D+ ++ + +S + + + KE Sbjct: 118 NIENKSFNLAKIATITTNTEIL--IPVKHLSKIVLLKPDDIYYIKAELSETVIRTKD-KE 174 Query: 173 GFTELTLRTLES---RTPLLRCHRQYLVNLAHLQEIR 206 + L E R H+ YLVNL ++E++ Sbjct: 175 YISNRKLYEFEDILKYIGFFRVHKSYLVNLTKIKEMK 211 >UniRef50_Q2SQ69 Alginate biosynthesis regulatory protein AlgR-like protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQ69_HAHCH Length = 246 Score = 113 bits (282), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 82/242 (33%), Positives = 126/242 (52%), Gaps = 9/242 (3%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M KV+IVDDEPLARE L+ L + + E+ E S E + + PD++ LDI+MP Sbjct: 1 MTKVIIVDDEPLARERLKRLLLD-THYEVCAEASGGDEALERIRLHSPDIVLLDIRMPGK 59 Query: 61 SGLEMVGMLDPEHRP-YIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 GLE+ L +P ++F TA+DEYAI+AF A DYLLKPI L + L + Q Sbjct: 60 DGLEVAAELAQHPQPPAVIFTTAYDEYAIQAFRVRAQDYLLKPIRREDLMRALQNVTQVN 119 Query: 120 SKQDVSLLPE---NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTE 176 Q SL E +A + C + +++ D+ ++ + V V +G E ++ Sbjct: 120 RAQLQSLKQEINGQDEAPAVVVCRSSRGMERIKISDILYLQAEHKYVTVFHAQG-ETLSD 178 Query: 177 LTLRTLES--RTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL-TVPVSRRYLKSL 233 L+ LE LR HR L+N +++ ++ +G E+ LR +PVSRR + + Sbjct: 179 QPLKELEQALHPHFLRIHRNTLINRHYIEILQRRHDGHYEVRLRGVREALPVSRRLVTEV 238 Query: 234 KE 235 K+ Sbjct: 239 KQ 240 >UniRef50_Q0K6B3 Response regulator containing a LytTR DNA-binding domain n=2 Tax=Cupriavidus RepID=Q0K6B3_RALEH Length = 253 Score = 113 bits (282), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 77/252 (30%), Positives = 132/252 (52%), Gaps = 24/252 (9%) Query: 4 VLIVDDEPLARENLRVFLQEQ-SDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 LI DDE R LR LQ +++IV E +N +E A+ +L P V FLDI+MP +SG Sbjct: 5 ALIADDEEHLRAYLRSKLQRHWPELQIVAEATNGIEAADAIARLSPSVAFLDIKMPGLSG 64 Query: 63 LEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSKQ 122 LE+ ++ + R +VF+TA+DE+A+ AFE A DYL+KP+ E RL +T+ RLR ++ Q Sbjct: 65 LEVAQGIETDTR--LVFVTAYDEFALDAFERAAVDYLVKPVSEERLGRTIERLR--KALQ 120 Query: 123 DVSLLPENQQ----------------ALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT 166 + + LPE Q L+++ + + + +++V + S V V Sbjct: 121 EAAPLPELAQLLSQLTRAQPRAESGGQLRWVRASRGNTTSHVPIQEVMYFQSDDKYVVVH 180 Query: 167 SHEGKEGFTELTLRTLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG-LTV 223 + +G+ + P + HR +VN+ ++ R ++ G+ + +R+ + Sbjct: 181 TRDGEHLIRTPLAELIAGLDPEVFWQIHRSSIVNMEYVAGTRRDEAGRLFVRMRDSEAEL 240 Query: 224 PVSRRYLKSLKE 235 PVSR Y+ ++ Sbjct: 241 PVSRAYMHRFRQ 252 >UniRef50_B1KPY2 Two component transcriptional regulator, LytTR family n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KPY2_SHEWM Length = 246 Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 82/250 (32%), Positives = 131/250 (52%), Gaps = 18/250 (7%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+KVLIVDDE LAR L L + DIEIVGE + + + + K D+ F+DIQMP + Sbjct: 1 MLKVLIVDDEYLARLELTRLLSKYVDIEIVGEAEDGHQALELLKKTSVDLAFVDIQMPEM 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR---- 116 GLE + + +VF TAF E+A+ AFE +AFDY++KPI RLE L ++R Sbjct: 61 DGLEFAKQAESQQFQ-LVFCTAFSEHAVDAFELNAFDYIVKPIMPERLEAVLNKVRLIQE 119 Query: 117 --QERSKQDVSLLPENQQ-ALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 E + D+ LP+N LKF S ++++ ++ S + V V S GK Sbjct: 120 THDETEQDDIQCLPDNHGLLLKF-----GSDYKIVRINEICRFESLGNHVAVYSDSGK-S 173 Query: 174 FTELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLE-DNGQAELILRNGLTVPVSRRY 229 + ++L +E + + R +V + + +I +G ++ + NG + VSRR Sbjct: 174 YLHISLSKVEKKLDPAVFFKASRSDIVRVDQIDKIEEGMASGSLQVHMNNGQEIDVSRRQ 233 Query: 230 LKSLKEAIGL 239 ++ L++ + Sbjct: 234 VQLLRKIFSI 243 >UniRef50_B5JSZ7 Response regulator receiver:LytTr DNA-binding region n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JSZ7_9GAMM Length = 246 Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 77/240 (32%), Positives = 127/240 (52%), Gaps = 8/240 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I VLIVDDEP AR+ L +++ E+V E N ++ I ++ + ++ LDI+MP + Sbjct: 3 ISVLIVDDEPPARQRLVRLVEKTPGYEVVAEAGNGIDAIARFNETQAQIVLLDIRMPVMD 62 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+E L E P I+F TA+ ++A++AFE HA DYLLKPI + RL++ L ++ Sbjct: 63 GIEAAQHLTQHETPPAIIFTTAYSDHALQAFESHAIDYLLKPIRQERLDQALEAAQRSNL 122 Query: 121 KQDVSLLPE-NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT-SHEGKEGFTELT 178 Q S+ + + + + I + L+ + D+ + + YVT H G E E Sbjct: 123 AQVKSVAEDSDSDSRQHICVRNRGNLELVDIDDIFYFFAEHK--YVTLRHRGGEVLIEEA 180 Query: 179 LRTLESR--TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT-VPVSRRYLKSLKE 235 L LE LR HR L+ + LQ + +G ++L+N + VSRR+L ++++ Sbjct: 181 LIGLEKEFGDRFLRIHRNCLIAVEQLQGLEKNADGTHRVVLKNCEDRLEVSRRHLSTVRK 240 >UniRef50_A4E9W5 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W5_9ACTN Length = 238 Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/221 (31%), Positives = 124/221 (56%), Gaps = 14/221 (6%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M++ +IVDDE AR LR L++ I + E S+ I + + R DV+FLDI MP Sbjct: 1 MLRAMIVDDEAPARSELRFLLEQTGKIGTITEASSVRSAIEMLMESRVDVVFLDISMPGA 60 Query: 61 SGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 SGL++ L ++ P IVF+TA+ ++A++AF+ A DYL+KP++EARL++ + ++ Q R Sbjct: 61 SGLQLAEALHKLKNPPAIVFVTAYSDHAVEAFDVDAVDYLMKPVEEARLDRAIEKVMQ-R 119 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSR--MSGVYVTSHEGKEGFTEL 177 +K + +++ ++ IP R L+ + D+ F+ ++ S +Y + Sbjct: 120 AKP----VTDSKVTIERIPVEKGGRKVLIPVDDIRFIMAKDDYSCIYTVDD---RFLSTT 172 Query: 178 TLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAEL 215 +L E++ R HR+Y+VNLA + ++ +G +L Sbjct: 173 SLAQFEAKLCDFGFFRVHRRYIVNLACVTDVETVPSGAIQL 213 >UniRef50_A6LJ90 Two component transcriptional regulator, LytTR family n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LJ90_THEM4 Length = 226 Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 74/240 (30%), Positives = 131/240 (54%), Gaps = 15/240 (6%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI+V+I+DDE ARE L+ + + + E+ G + E + + K DV+FLDI+MPRI Sbjct: 1 MIRVVIIDDEYYAREMLKDLIIQITPFELKGCFESVEEFLKSKIKNEVDVIFLDIEMPRI 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE-R 119 +G++ L+ R +VF+TA+ EYA+ AFE +A DYL KPI E R +T+ R+ + R Sbjct: 61 NGIKAAKYLE---RYKVVFVTAYSEYAVNAFEVNALDYLTKPISEVRFIETMRRIEEVFR 117 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 K+ V + EN + + F+ S +Y + + + G +V H F L+ Sbjct: 118 DKKLVKISVENNKEIVFL---DFSDVYFFEYFEKRILVITDKGEFVLKH-----FKNLSK 169 Query: 180 RTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL 239 E + +R H+ Y+VN+ +++ R N + L L+ G +P+ + +++ ++ + + Sbjct: 170 LEKELPSNFIRVHKSYIVNIDYVE--RFIKNLNS-LQLKGGKIIPIGKTHIRDIRNVLKI 226 >UniRef50_C3JDP1 Response regulator, two-component system n=4 Tax=Actinomycetales RepID=C3JDP1_RHOER Length = 263 Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 82/243 (33%), Positives = 120/243 (49%), Gaps = 11/243 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + VL VDDE A + L L+ + + V S+A + + D +FLDI MP + Sbjct: 10 LTVLAVDDEKPALDELAFLLRAEDSVAHVHTASDATTALRILRGGSIDAVFLDINMPGLD 69 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GLE+ G+L P +VF+TA D+ A+ AF+ A DYLLKP+ E RL + + R+ Sbjct: 70 GLELAGILSNFATPPPVVFVTAHDDRAVDAFDLGAVDYLLKPLREERLAQAVQRIVGLAG 129 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSH-EGKEGFTELTL 179 + PE + IP L+Q V +V + G Y H GK + + Sbjct: 130 RTKSESKPEAAPTDEVIPVELGGVTTLVQRSSVEWVEA--DGDYARLHTAGKSHLVRIPI 187 Query: 180 RTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG----LTVPVSRRYLKS 232 TLESR LR HR YLV+LA + IR +G + +G + +PVSRR+ + Sbjct: 188 STLESRWADAGFLRVHRSYLVSLALVTGIRTVGSGLVVCLRPHGDKPPVELPVSRRHTRE 247 Query: 233 LKE 235 LK+ Sbjct: 248 LKD 250 >UniRef50_Q8E7H3 Sensory transduction protein lytR n=8 Tax=Streptococcus agalactiae RepID=LYTR_STRA3 Length = 246 Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 73/247 (29%), Positives = 127/247 (51%), Gaps = 10/247 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEI--VGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 +K+LI+DDE AR+ L ++ +++ + + + E + + + D++FLDI + Sbjct: 1 MKILILDDEMFARQELSFLVEHSQEVDNPEIFQAEDISEAEKILFRQQIDLIFLDISLSE 60 Query: 60 ISGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLA---RL 115 +G + L H P +VF TA+D YA+KAFE +A DY++KP ++ R++ L+ +L Sbjct: 61 ENGFTLANQLSQLAHPPLVVFATAYDNYAVKAFESNAVDYIMKPFEQQRVDMALSKVKKL 120 Query: 116 RQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFT 175 Q + DV + +++ + T R +++M+D+ +S G S K Sbjct: 121 SQLTTASDVEQAIPKKASVELLTLTLSDRSVVVKMQDIV-AASVEDGELTVSTVQKTYTI 179 Query: 176 ELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKS 232 TL +SR L+ HR ++NL ++EI+ N LI+ NG PV R YLK Sbjct: 180 RKTLNWFKSRAVAPYFLQIHRNTVINLEMIEEIQPWFNHTLLLIMSNGEKFPVGRSYLKD 239 Query: 233 LKEAIGL 239 L E + + Sbjct: 240 LNEHLTM 246 >UniRef50_D2QUQ7 Two component transcriptional regulator, LytTR family n=3 Tax=Sphingobacteriales RepID=D2QUQ7_9SPHI Length = 250 Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 85/251 (33%), Positives = 127/251 (50%), Gaps = 16/251 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQS-DIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 +K L++DDEP +NLR L ++I G NA G ++ +PD+LFLDIQMP Sbjct: 3 VKALLIDDEPNNLDNLRALLDVYCPQVDICGMALNAEAGQRLLYTHQPDLLFLDIQMPGQ 62 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLAR-LRQER 119 +G +++ L PEH ++F+TA+D+YAI+A A DYLLKP+D L+ + R ++Q R Sbjct: 63 NGFDLLRKL-PEHDFEVIFVTAYDQYAIQAMRFAAVDYLLKPVDIGELQAAVDRAIKQRR 121 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSR-----MSGVYVTSHEGKEGF 174 K L LK RI L K+ FV + S T+ +G Sbjct: 122 LKVQNQQLENLLTLLKTGAANEAQRITLATAKETRFVKTSEIVRCQSSNNYTTFYLTDGE 181 Query: 175 TELTLRTLESRTPLL------RCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRR 228 T L R + LL RCH+ +LVN A ++ + E L+L +G +P++R Sbjct: 182 TLLVCRPIYEYDELLKSHGFMRCHQSHLVNKAFIKSWKKEFGD--FLLLTDGTELPIARG 239 Query: 229 YLKSLKEAIGL 239 LK+A+ L Sbjct: 240 KKDELKKALRL 250 >UniRef50_Q4L8V4 Sensory transduction protein lytR n=60 Tax=Bacilli RepID=LYTR_STAHJ Length = 256 Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 76/259 (29%), Positives = 126/259 (48%), Gaps = 25/259 (9%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K LIVDDEPLAR L L E S ++ E N E + + D++FLDI + S Sbjct: 1 MKTLIVDDEPLARNELHYLLNEISGFNVIDEAENIEETLEKLLSETYDLVFLDINLMDES 60 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+++ + + P+I+F TA D +A+KAFE A DY+LKP + R+E+ + +++ + S Sbjct: 61 GIDLAQKIKKMKQPPHIIFATAHDTFAVKAFELDAIDYILKPFELERIEQAVNKVKHQIS 120 Query: 121 -----------------KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGV 163 +QD E+Q L P + RIY+++ D+ VS +G+ Sbjct: 121 NSNEIDHITSEPSTLSMQQDDRQENEDQTVL---PIEMNERIYVIRKDDITAVSVN-NGI 176 Query: 164 YVTSHEGKEGFTELTLRTLE---SRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG 220 + + T L E S ++ HR ++N H+ + N ++ + +G Sbjct: 177 TTINTTHRTYQTNEPLNYYEKKLSNNTFIKIHRATIINKTHIDSVEHWFNYTYQVTMTSG 236 Query: 221 LTVPVSRRYLKSLKEAIGL 239 VSR ++K+ K IGL Sbjct: 237 DKFQVSRSFMKAFKHEIGL 255 >UniRef50_C2D9N2 Two-component response regulator n=3 Tax=Coriobacteriaceae RepID=C2D9N2_9ACTN Length = 247 Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 79/253 (31%), Positives = 134/253 (52%), Gaps = 22/253 (8%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLR------PDVLFLD 54 +I LIVDDE AR L+ L++ + + E S+A + A+ + + +V+FLD Sbjct: 3 VINALIVDDEAPARSELKYLLEQTGRVARIEEASSARSAVEALVRSKEGAEQATNVIFLD 62 Query: 55 IQMPRISGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLA 113 I MP++SG+++ L + P +VF+TA+ EYA++AF+ A DYL+KP++ RL + L Sbjct: 63 ISMPKMSGMQLAEALHKLNNPPVVVFVTAYSEYALEAFDVDAIDYLMKPVEMDRLLRALD 122 Query: 114 RLRQERSKQDVS-LLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 ++ Q V PE IP + R L+ + + ++ +R Y + E Sbjct: 123 KVEQHLQPVGVPRATPER------IPVEKNGRKVLIPISHIRYIEARDD--YSCIYTFDE 174 Query: 173 GF-TELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN--GLTVPVS 226 F + ++L E++ R HR Y+VNL +++I G +L +++ +PVS Sbjct: 175 RFLSTVSLAKFEAKLADHGFFRVHRGYIVNLEQVEDIEAVSAGILQLGIKDVPDKKIPVS 234 Query: 227 RRYLKSLKEAIGL 239 RR + SLK A+GL Sbjct: 235 RRRVVSLKRALGL 247 >UniRef50_Q15WR1 Response regulator receiver protein n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15WR1_PSEA6 Length = 276 Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 82/272 (30%), Positives = 128/272 (47%), Gaps = 39/272 (14%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 + L+VDDEPLARE L + L E +I ++G C+NA + + +PDV+FLDI+MP Sbjct: 3 VFSALVVDDEPLAREGLALRLAEYENITVLGCCNNASQAYDVLSVKQPDVIFLDIEMPGK 62 Query: 61 SGLEMVGMLDPEHRP-YIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL---- 115 +GLE+ L E P IVF+TAF E+A+ AF+ A DYLLKP + RL++ + +L Sbjct: 63 TGLELAEQLRLEGNPATIVFVTAFREFAVNAFDFKASDYLLKPFSDERLKECIEKLSCAG 122 Query: 116 ------RQERS----------------------KQDVSLLPENQQALKFIPCTGHSRIYL 147 RQ ++S E + + I S Sbjct: 123 DVTRVVRQHEKLGRLLSRKTGNSIDSFIHSLEVSNELSSTHELNELQQVISLKSGSVWIR 182 Query: 148 LQMKDVAFVSSRMSGVYVTSH-EGKEGFTELTLRTLESRTPLL---RCHRQYLVNLAHLQ 203 +++ D+ ++ + +G Y+ H G TL+ E + R R ++N+A L Sbjct: 183 VKLDDIVWIEA--AGDYMCVHTTGDTHIIRKTLKQFEQELDSVHFPRVSRSAIINIAKLT 240 Query: 204 EIRLEDNGQAELILRNGLTVPVSRRYLKSLKE 235 + NG+ L N + V V R+Y S+ E Sbjct: 241 TLTPNSNGEYVAQLGNDIQVKVGRKYKFSIDE 272 >UniRef50_D2QDN3 Two component transcriptional regulator, LytTR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QDN3_9SPHI Length = 256 Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 79/256 (30%), Positives = 136/256 (53%), Gaps = 26/256 (10%) Query: 3 KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 +V+I+DDEP AR+ + F+ + D++ V CSNA++G+ A+ L+PD+LFLDIQMP ++G Sbjct: 6 RVIILDDEPPARDLIETFVSQLPDLQCVASCSNAIQGLQAIQDLKPDLLFLDIQMPEMTG 65 Query: 63 LEMVGM-LDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER-- 119 L+++ + L P RP I+ TA+ +YA+ ++E DYL+KPI R + + + R++R Sbjct: 66 LDLMKLPLTP--RPEIILTTAYPQYALTSYEFSVLDYLVKPIAFDRFIRAIVKFREKRQP 123 Query: 120 SKQDVSLLP------ENQQALKFIPCTGHSRIYLLQMKDVAFVSSR----MSGV--YVTS 167 + V P Q +P + I+L + K + + + + G+ YV Sbjct: 124 ASPPVGWYPIEESPASGQPRTDGVPLPESNSIWLREEKRLLQIPYQEILYVEGLKDYVKV 183 Query: 168 H-EGKEGFTELTLRTLE---SRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTV 223 H + + T + L E + +R HR ++V L+ IRL D + L NG + Sbjct: 184 HLQHQVIVTHMNLGKAEKLFAPPQFVRVHRSFIVLLS---AIRLIDGN--TITLTNGKQL 238 Query: 224 PVSRRYLKSLKEAIGL 239 + Y + LK+ I + Sbjct: 239 AMGPLYREELKKHISV 254 >UniRef50_D0LSR9 Two component transcriptional regulator, LytTR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LSR9_HALO1 Length = 240 Score = 109 bits (272), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 86/244 (35%), Positives = 134/244 (54%), Gaps = 12/244 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++VL+VDDE AR+ L L ++ + +AV + + P+V+ LDI MP I Sbjct: 1 MRVLVVDDEAPARQRLARMLARIPEVGDIAVADSAVAARALLRQSPPEVVLLDIHMPEID 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL ++ L+P P ++F+TA++++A++AFE A DYLLKP+++ARLEK L R R Sbjct: 61 GLTLL-ELEPAM-PPVIFVTAYEQHAVRAFELAAVDYLLKPVNQARLEKALRRARA-LGA 117 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSS-RMSGVYVTSHEGKEGFT-ELTL 179 D++ L + + P +L++ D A ++ R + Y G E F + +L Sbjct: 118 SDIAALHGHMRP-DAPPRLAARAGEVLRLFDPAQLTRIRAADKYAIIDMGGEEFVLDDSL 176 Query: 180 RTLESR-TP--LLRCHRQYLVNLAHLQEIRLEDNGQA-ELILRNGLTVPVSRRYLKSLKE 235 +LE R P +R HR L+NLA ++ L +G A E+ L +G PVSRR L LK Sbjct: 177 TSLEKRLAPHGFVRVHRAELINLAAVRA--LHGSGSATEVELSDGQRAPVSRRLLAELKR 234 Query: 236 AIGL 239 +GL Sbjct: 235 RLGL 238 >UniRef50_Q479S3 Transcriptional regulator, LytR/AlgR family n=3 Tax=Betaproteobacteria RepID=Q479S3_DECAR Length = 262 Score = 109 bits (272), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 86/251 (34%), Positives = 134/251 (53%), Gaps = 23/251 (9%) Query: 2 IKVLIVDDEPLARENLRVFLQE---QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMP 58 +KVLIVDDEPLAR+ LR L + Q E+VGE +N + + A+ + DV+ DI+MP Sbjct: 11 LKVLIVDDEPLARDRLRALLSDLSAQLSSEVVGEAANGLLALEALRQQTVDVVLADIRMP 70 Query: 59 RISGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ 117 + G+E+ L E P ++F TA+D YA++AF+ +A DYLLKP+ R+++ LA L++ Sbjct: 71 GMDGIELATHLGRLEKPPAVIFTTAYDNYAVQAFDLNAVDYLLKPV---RVQRLLAALQK 127 Query: 118 -ERSKQDVSLLPENQQALK-----FIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHE-G 170 + D SLL Q ++ + C R+ L+ + +V + + + YVT+ Sbjct: 128 VPGPRPDTSLLANIGQEVRGGGRTHLSCHERGRLLLVPIAEVLYFKADLK--YVTARTVE 185 Query: 171 KEGFTELTLRTLESRTP--LLRCHRQYLV---NLAHLQEIRLEDNGQAELILRNGL--TV 223 +E + L LES LR HR LV LA ++ ++D L G+ + Sbjct: 186 REYLLDEALTHLESEFADRFLRLHRSVLVAKAALAGFEKAVVDDAEAYGWALLRGVPEKL 245 Query: 224 PVSRRYLKSLK 234 PVSRR + K Sbjct: 246 PVSRRQWAAAK 256 >UniRef50_D0IHA7 Response regulator n=1 Tax=Vibrio sp. RC586 RepID=D0IHA7_9VIBR Length = 266 Score = 109 bits (272), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 79/247 (31%), Positives = 132/247 (53%), Gaps = 28/247 (11%) Query: 5 LIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGL 63 +I DDEPL R +L L + +EIV N + A+ + +P+V+FLDI+MP++ GL Sbjct: 15 VIADDEPLLRHHLNKMLADVWPALEIVANAENGEVALQAIEQHQPNVVFLDIRMPKMDGL 74 Query: 64 EMV-GMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK- 121 E+ +L RP +VF+TA+DEYA+ AF+ +A DYLLKPI +RL RL+Q+ + Sbjct: 75 EVARSLLQLPKRPLVVFITAYDEYALSAFDANAIDYLLKPISLSRLIDCCERLQQQLQRA 134 Query: 122 ---QDVSLL------------PENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT 166 D++ L P+ Q LK + I+LL + DV +V + + + Sbjct: 135 APTADLAQLFSQFEQLTRNVKPDYQVWLK---ASKGEDIHLLAVSDVLYVKAEDKYLSLY 191 Query: 167 SHEG---KEGFTELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG 220 ++G +E +L+ L S+ + HR VN+A + ++ + NG+ + + + Sbjct: 192 KNDGVLAQEYLLRTSLKELLSQLDPNQFWQIHRSLAVNVAKIDKVTRDLNGKMWVHI-DR 250 Query: 221 LTVPVSR 227 + +PVSR Sbjct: 251 IQLPVSR 257 >UniRef50_D2QJ93 Two component transcriptional regulator, LytTR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QJ93_9SPHI Length = 224 Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 63/232 (27%), Positives = 121/232 (52%), Gaps = 20/232 (8%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+ L+V+DEPLAR+ + ++ + +D+ +V C++A E + D++FLDI++P + Sbjct: 1 MMNCLVVEDEPLARQVVETYIHQSADLRLVKSCTHAFEAFEVLTAYPVDLMFLDIELPSL 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G++ + L + P ++F TA+ +YA++++E A DYLLKPI R ++++ + + + Sbjct: 61 TGIDFIRRL--KQPPALIFTTAYSDYAVESYELEAVDYLLKPITYERFKQSVDKFFKRTA 118 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 P + G ++ L+ D+ + S + + + E + LT++ Sbjct: 119 P------PPTAATYSYFKVDG--QLVKLEHGDIVYAQSIKDYILLKTAE-RSFIVHLTMK 169 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRY 229 L P R HR YLVNLAH+ ++ +D I +T+P+ Y Sbjct: 170 GLSELLPEGQFRRIHRSYLVNLAHVTKVSRQD------IQLGAITLPIGESY 215 >UniRef50_C8W4Q6 Two component transcriptional regulator, LytTR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W4Q6_DESAS Length = 256 Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 74/245 (30%), Positives = 129/245 (52%), Gaps = 13/245 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I VL+ DD+P+ + LR L E D+++VGE N +E + V KL P ++FLDI MP+ Sbjct: 3 ITVLLADDDPVMCKILRSILLELPDVKVVGEAHNGLETLRLVKKLEPQIVFLDIAMPQKD 62 Query: 62 GLEM---VGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR-- 116 GLE+ + ++ P I+F TA++ Y +AFE +AFDYL+KP R+ KT+ R++ Sbjct: 63 GLEIAQEIRIIMP--MTIIIFATAYENYTHEAFEVYAFDYLIKPYRINRIYKTIERIKFW 120 Query: 117 --QERSKQDV-SLLPENQQALKFIPCTGHSRIYLLQMKDVAFVS--SRMSGVYVTSHEGK 171 E D+ S ++ I + + + +KD+ F++ +R + ++ K Sbjct: 121 FGTENKPNDIFSDKARSEIRESIIVVKEYGKNIFINLKDIIFITRDARFTTIHFIGGIIK 180 Query: 172 EGFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL-TVPVSRRYL 230 T L + RCHR Y++NL ++EI+ ++ +RN TV +++ Sbjct: 181 TSETLELLNNKLNGDSFFRCHRGYIINLNMIKEIQPCGKKTFKVFMRNTTETVLMTKSKA 240 Query: 231 KSLKE 235 ++K+ Sbjct: 241 SAIKD 245 >UniRef50_A1ZQ18 Transcriptional regulator protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZQ18_9SPHI Length = 248 Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 71/237 (29%), Positives = 125/237 (52%), Gaps = 13/237 (5%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQS-DIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 M+K LI+DDE AR L+ L+E IEIVGE + + A+HK +P+++FLDI+MP Sbjct: 1 MLKALIIDDEAKARRILQELLKEYCPQIEIVGEADDVPNAVKAIHKYQPNLVFLDIEMPG 60 Query: 60 ISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARL----EKTLARL 115 +G +++ D + I+F TA+ EYAI+AF+ A DYLLKPI L EK +L Sbjct: 61 YTGFQLLDFFDTINFE-IIFTTAYREYAIQAFQVSAIDYLLKPIQIELLIKAIEKVEGQL 119 Query: 116 RQERSKQDVSLLPEN--QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 + + + + L N Q+ + I + +++ + ++++ + + GK+ Sbjct: 120 SEPQINERIDTLKSNLSQEYITRIALPVAEGLLFIEVDQIVYLNAEGAYTQIFLEGGKKV 179 Query: 174 FTELTLRTLE---SRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSR 227 +++ E R HR YL+NL +++ +D G +++ N +V ++R Sbjct: 180 LVSKKIKSFEKVLDHPSFFRTHRSYLINLNRVKQYVRQDGGY--IVMDNNDSVNLAR 234 >UniRef50_A4BAR2 Alginate biosynthesis regulatory protein AlgR-like protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BAR2_9GAMM Length = 238 Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 77/238 (32%), Positives = 126/238 (52%), Gaps = 9/238 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++VL+VDDEPLARE L FLQ+ D+E + S+ E + ++ R DVL LDI+MP ++ Sbjct: 1 MRVLVVDDEPLARERLVRFLQDIDDVENIATASSGEEALSKLNDFRADVLLLDIRMPGLN 60 Query: 62 GLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GL + + E P I+F TA+D++A++AF+ A YLLKPI L L R+ Sbjct: 61 GLSVADRVQQQEQPPAIIFCTAYDDHAMEAFQVRAQSYLLKPIQRQALTDALHTCRRLNR 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 Q +L + QQ + + + + DV F + V + G E + +L+ Sbjct: 121 AQVQAL--DTQQQVDSLSVQHGREKEIWPLSDVYFFRAEQKYVMLFGLHG-ERVVDESLK 177 Query: 181 TLESR--TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVP--VSRRYLKSLK 234 LE R + +R HR L+ A ++++ + G + +R G+ P VSRR+ + ++ Sbjct: 178 ALEQRFASSFVRVHRNTLIARARVEKLYRDHEGGYWVRVR-GVEEPIAVSRRHAREVR 234 >UniRef50_A4C5W8 Two-component system response regulator protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C5W8_9GAMM Length = 228 Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 77/239 (32%), Positives = 129/239 (53%), Gaps = 20/239 (8%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+K L++DDEPLA E + L + SDI IVG C NA + + + D+LFLDI MP + Sbjct: 1 MLKALMIDDEPLAHEVIVYHLAQHSDIRIVGRCYNATQALSWLASNEVDLLFLDINMPDL 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G++++ +L +RP ++ ++A+ EYAI+ FE DYLLKP+ RL L ++R Sbjct: 61 NGIDLLKVL--RNRPQVIIISAYQEYAIQGFELDVTDYLLKPVCGERLSLALDKVRLRTQ 118 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE-----GFT 175 KQ ++ PE Q + + R + + D+ + + G YV +G + Sbjct: 119 KQLLN-KPEPQHII--LKVDREKRKF--SLTDITLLEA--YGNYVKLWQGNDMVLVSSSL 171 Query: 176 ELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLK 234 +L + L +R + H+ Y+VN +++ + LE + L L G TV S+ + K+L+ Sbjct: 172 KLLIEALPNRQ-FTQVHKSYVVN--NVKVVALETD---LLTLECGRTVKASKTFKKNLQ 224 >UniRef50_A6GZR7 Two-component system response regulatory protein n=1 Tax=Flavobacterium psychrophilum JIP02/86 RepID=A6GZR7_FLAPJ Length = 250 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 82/257 (31%), Positives = 133/257 (51%), Gaps = 30/257 (11%) Query: 2 IKVLIVDDEPLARENLRVFLQ--EQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 IKV+IVDDE AR LR F + IE+V EC++ + A+ K +PD++FLDIQMP Sbjct: 3 IKVIIVDDEMHARSFLRKFCERYHSETIEVVEECNSVEAAVRAIKKYQPDLVFLDIQMPD 62 Query: 60 ISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +G E + D + I+F TA+ EYAI+A ++ A DYL+KP + L+R ++ Sbjct: 63 ENGFEFLKYFDKINFE-IIFTTAYKEYAIEAIKKSALDYLVKPFSKEDFNIALSRFMSKK 121 Query: 120 S-KQDVS---LLPEN-------QQALKFIPCTGHSRIYLLQMKDVAFVSS--RMSGVYVT 166 + K D LL EN +Q + F +G ++Q + + S S +++ Sbjct: 122 NVKIDFDRFKLLTENINNQFTDKQRIVFPTKSGFE---VIQANSIVYCKSDGSYSNIFII 178 Query: 167 SHEGKEGFTELTLRTLES---RTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTV 223 KE FT +L+ +E + +R H+ Y+VN +++ + + + +L L G ++ Sbjct: 179 ---DKELFTSKSLKEIEDILVDSNFIRIHKSYIVNKNYIKGFK---SDEFKLDLITGDSI 232 Query: 224 PVSRRYL--KSLKEAIG 238 PVS K L +AI Sbjct: 233 PVSDTLFSKKKLMDAIS 249 >UniRef50_A8ET22 Two-component response regulator n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ET22_ARCB4 Length = 235 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 73/227 (32%), Positives = 122/227 (53%), Gaps = 22/227 (9%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +KVLIVDDE LA L+ L + + +IV E ++ +E I + K + DV FLDI MP S Sbjct: 1 MKVLIVDDENLALGRLKRVLNDNNVFDIV-EFNDPLEAIKEISKTKFDVAFLDISMPNFS 59 Query: 62 GLEMVGM-LDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GLE+ + L E + +IVF TA++EYA+ AF++ YLLKP++++ L+K L R Sbjct: 60 GLELAELILKLEPKTFIVFQTAYEEYALDAFKKGGMGYLLKPVEDSELKKILQR------ 113 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEG------KEGF 174 +S+ E + K I +IYL++ ++ ++ + + + + + + K G Sbjct: 114 ---ISIYKEEKNISKKILGKVSDKIYLVETDEIFYIKADLDEIIIRTKDNFVYAKKKIGD 170 Query: 175 TELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL 221 E L+ R HR Y+VN+ ++ I+ + + E I NG+ Sbjct: 171 IEEILKD----KNFFRVHRSYIVNVDKIKSIKSIEQSKLE-IFFNGI 212 >UniRef50_A3J233 Response regulator n=3 Tax=Bacteroidetes RepID=A3J233_9FLAO Length = 250 Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 83/248 (33%), Positives = 129/248 (52%), Gaps = 34/248 (13%) Query: 2 IKVLIVDDEPLARENLRVFLQEQS-DIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 + VLIVDDE AR L L+E S ++ + E S ++G+ + K + DVLFLDI+MP+ Sbjct: 1 MNVLIVDDESKARSLLSTILKENSAEVTNILEASTLLQGVDLIKKNKIDVLFLDIEMPQH 60 Query: 61 SGLEMVGMLDPEHRPY-IVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLAR----L 115 SGLE+ + E + I+F TA+ EYAIKAFE A DYLLKP+ ++++ L + L Sbjct: 61 SGLELFDFISIESVNFEIIFTTAYSEYAIKAFEFSAIDYLLKPLRPNKVKEALGKASKSL 120 Query: 116 RQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFT 175 Q + +Q + L + + KF S++ L V FV ++ +YV +G +T Sbjct: 121 NQNQLQQRLLELKNSLSSDKF------SKLALPVEDGVLFV--KLDEIYVLEADG--MYT 170 Query: 176 ELTLRT----------------LESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN 219 L LE + + HR YLVNL +LQ++ ++ E + N Sbjct: 171 TFNLTNNRKILISKPLKYFSDLLEHKELFYKPHRSYLVNLKYLQKVVKKEGTYIE--MEN 228 Query: 220 GLTVPVSR 227 + +PVS+ Sbjct: 229 EMRIPVSK 236 >UniRef50_A8T0B1 Two-component response regulator n=1 Tax=Vibrio sp. AND4 RepID=A8T0B1_9VIBR Length = 237 Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 77/249 (30%), Positives = 129/249 (51%), Gaps = 26/249 (10%) Query: 4 VLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGL 63 +L++DDEP A + L+ L +IE+VG + GI A+ + RPD++FLDI+MP + G Sbjct: 1 MLLIDDEPAATQALKRGLIAFEEIEVVGCYHDPHRGIEAIFQKRPDIVFLDIEMPELDGF 60 Query: 64 EMVGMLDPEHRPY-IVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSKQ 122 E+ EH PY +V++TA+ ++A+ +FE DYLLKP+ E RLE+ L +++Q Sbjct: 61 EVAK--KTEHIPYHLVYVTAYPQHALTSFETKVVDYLLKPVRETRLERCLKKIKQ----- 113 Query: 123 DVSLLPEN--QQALKFIPCTGHSRIYLLQMKDVAFVSS--RMSGVYVTSHEGKEGF---- 174 LP + ++ I Y L +D+++V + R + +T +E F Sbjct: 114 ----LPPRAATKRIEGITIYDGKTTYRLTSQDISYVENIGRYQQINLTEL-AQEKFQIQT 168 Query: 175 --TELTLRTLES---RTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRY 229 T+ T+ E+ T +R HR Y++NL L + E ++ T+P++R Sbjct: 169 VVTQDTMTNFEAALDSTQFVRVHRSYIINLQLLMRVHREARNTFVYLMGVDKTIPIARSK 228 Query: 230 LKSLKEAIG 238 L L E + Sbjct: 229 LALLLEYLN 237 >UniRef50_C2G2I4 Response regulator n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G2I4_9SPHI Length = 246 Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 74/247 (29%), Positives = 129/247 (52%), Gaps = 22/247 (8%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI V+I++DE + + + L +SD +VG N + ++ RPDV+ +DIQ+ Sbjct: 1 MITVVIIEDEAVIEKEIVDLLSGESDTRLVGSSDNVSSAVQLINMHRPDVILMDIQLRDG 60 Query: 61 SGLEMVGMLD--PEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE 118 + +++ +LD P++ IVF+TA+D++AI+A + A DYLLKPID + + R R Sbjct: 61 TAFDIIRLLDYTPQN---IVFITAYDQFAIRAIKCGALDYLLKPIDHSEFRQAFERYR-T 116 Query: 119 RSKQDVS---------LLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHE 169 R+K S L+ +QQ + I +++ ++ ++D+ + Y + Sbjct: 117 RNKDIQSGLQLSLMQQLMEASQQIPEHIALPSLNQVRIITVQDIMYCRGEGPYTYFYLNN 176 Query: 170 GKEGFTELTLRTLES--RTP-LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVS 226 G+E L+ E +TP LR H+ YLVN ++ + + +LIL+N VPVS Sbjct: 177 GEEELVSKPLKYYEELLQTPFFLRTHQSYLVNRRYISGV----SSSEDLILKNQQQVPVS 232 Query: 227 RRYLKSL 233 R K++ Sbjct: 233 ARRKKNI 239 >UniRef50_A6G9H1 LytTr DNA-binding domain family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G9H1_9DELT Length = 267 Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 94/275 (34%), Positives = 133/275 (48%), Gaps = 48/275 (17%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSD-----IEIVGECSNAVEGIGAVHKLRPDVLFLDIQ 56 ++VLIVDDE AR LR L+ ++ IE+VGE ++ VE + + KL PD++ LDIQ Sbjct: 4 LRVLIVDDEAPARRRLRRMLERLTNDGAEAIEVVGEAADGVEALTQLTKLEPDLVLLDIQ 63 Query: 57 MPRISGLEMVGMLDPEHR--PYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLAR 114 MP + GL + +H P +F+TAFDE+A+ AFE A DYLLKPI RL+ L R Sbjct: 64 MPALDGLALA-----QHASLPPFIFVTAFDEHALAAFEVGAADYLLKPIRRERLQLALER 118 Query: 115 LRQE-RSKQDVSLLPENQQALKFIPCT-----------------------GHSRIYLLQM 150 R +++D S E L + T G S + L ++ Sbjct: 119 ARTRIEAQRDASAKGEGASELDELQATLRRLVAAEPAPASPTPPRIAAREGGS-VRLFEL 177 Query: 151 KDVAFVSSRMSGVYVTSHEG------KEGFTELTLRTLESRTPLLRCHRQYLVNLAHLQE 204 ++ S + Y H G EG EL LR +R HR LV+L ++ Sbjct: 178 AEIGRFWS--ADKYTCFHHGGAEHVLDEGLGELELRL--GAHGFVRVHRSELVDLGWVRA 233 Query: 205 IRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL 239 + E G L LR+G V VSRR + +K +GL Sbjct: 234 VHSE-AGATSLELRDGQRVAVSRRMVAEIKRRLGL 267 >UniRef50_A3UEG7 Two-component system regulatory protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UEG7_9RHOB Length = 258 Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 80/260 (30%), Positives = 127/260 (48%), Gaps = 25/260 (9%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++V DDEPLARE +R L DIEI GE N + I + P+++FLDI+MP++ Sbjct: 1 MRVCFADDEPLARERMRKMLALDEDIEICGEAQNGEDMIALIQAEEPELVFLDIEMPKLD 60 Query: 62 GLEMVGMLDP----EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ 117 G ++V L + P +F TAF A +A++ A D+L KPI ARLE L+R RQ Sbjct: 61 GFDVVEALAQATFRDEPPLFIFATAFPAMAAQAYDTGAIDFLTKPIRPARLELALSRARQ 120 Query: 118 -ERSKQDVSLLPENQQALKFIPCT------GHSRIYL--------LQMKDVAFVSSRMSG 162 RS++ +S L + Q L+ + T G I++ ++ + +VS+ Sbjct: 121 LLRSREAMSRLEKLQSHLEGLRETRSRSSQGPVSIWVSNGGQNIRVEPSQIEYVSAEAE- 179 Query: 163 VYVTSHEGKEGFT-ELTLRTLE---SRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILR 218 Y+ H G+ ++ E + +R HR Y+V + G + LR Sbjct: 180 -YIRLHIGERSLLHRQSISAFEEEMAEEGFIRVHRSYIVPARDCIQTSRTSWGGLLVHLR 238 Query: 219 NGLTVPVSRRYLKSLKEAIG 238 NG +PV R++ L+ +G Sbjct: 239 NGQVIPVGRKFKDKLQALMG 258 >UniRef50_A6EEN3 Two-component system response regulator n=4 Tax=Bacteroidetes RepID=A6EEN3_9SPHI Length = 241 Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 76/244 (31%), Positives = 123/244 (50%), Gaps = 22/244 (9%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + +IVDDEPLAR +R + E S IEI G+ SNA+ + D++FLDI+MP ++ Sbjct: 1 MNCIIVDDEPLARAEMRALISEISTIEISGDFSNALTAQDFLQHHSVDLIFLDIEMPMVT 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL+ L P+ +VF TA+ +YA+K++E A DYLLKPID+ +L+K++ + + Sbjct: 61 GLDFASQL-PD-TTMVVFTTAYPQYALKSYELDAIDYLLKPIDQLKLQKSIRKAEAYKIM 118 Query: 122 QDVSLLPENQQALK-----FIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHE-GKEGFT 175 D + PE Q L+ F+ R Y ++ ++ +V YV H + T Sbjct: 119 LDNN--PE-QNTLEGKTEDFLLIKSERRFYKVRFDEIKYVEGLKD--YVVIHTVNLKLIT 173 Query: 176 ELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKS 232 + L+T + P +R + Y+VN R ++ + NG +P+ Y K Sbjct: 174 AMNLKTFHQKIPQDVFIRISKSYVVNK------RFIESFDHHTVYINGFELPLGDVYRKD 227 Query: 233 LKEA 236 A Sbjct: 228 FFSA 231 >UniRef50_A5G4A4 Two component transcriptional regulator, LytTR family n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G4A4_GEOUR Length = 279 Score = 107 bits (266), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 81/248 (32%), Positives = 126/248 (50%), Gaps = 32/248 (12%) Query: 4 VLIVDDEPLARENLRVFLQEQ-----SDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMP 58 +IVDDEP +L FL+ Q +++I+ E +N + + + +L PDV FLDI+MP Sbjct: 11 AIIVDDEP----HLCAFLKRQLTSCWPELDILAEANNGPDALRLIGELHPDVAFLDIRMP 66 Query: 59 RISGLEM---VGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL 115 I GL++ VG L ++VF+TA+D+YA++AFE A DYLLKP+ RL KT+ RL Sbjct: 67 GIDGLDLASRVGTLC-----HVVFVTAYDQYAMQAFENAAVDYLLKPVALERLNKTVNRL 121 Query: 116 RQERSKQDVSLLP----------ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYV 165 + + S L P +Q L+++ + H+ I L+ + +V F + V Sbjct: 122 KSQLSSVPPDLSPLIAKLSEQIRPQKQYLQWLQVSSHNDIELIPVDEVEFFQASDKYTLV 181 Query: 166 TSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELIL-RNGL 221 + E +L+ LE R HR +V +A + I + G L L + G Sbjct: 182 VT-RNTERIMRKSLKELEEELDPERFWRVHRNAIVRVAAIARISRDFRGHHVLHLHQGGR 240 Query: 222 TVPVSRRY 229 T+ V R Y Sbjct: 241 TLAVGRNY 248 >UniRef50_A6LDC2 Two-component system response regulator protein n=5 Tax=Bacteroidales RepID=A6LDC2_PARD8 Length = 234 Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 67/234 (28%), Positives = 129/234 (55%), Gaps = 28/234 (11%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IK +I DDEP+AR+ LR + + + IVGEC +A++ ++ ++ D+LFLDI+MP +S Sbjct: 3 IKCIITDDEPIARKGLRRHIGKIDFLTIVGECEDAIQLNNMLNSVQADLLFLDIEMPDMS 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR----- 116 GL+ + ++ P ++ +A++ YA++ +E DYLLKPI +R K++ + Sbjct: 63 GLDFLE--SAQNAPKVIITSAYERYALRGYEFDVVDYLLKPISFSRFLKSVNKAHALMES 120 Query: 117 QERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTE 176 +S++ + + ++ LK R+YL K++ F+ + + + + KE Sbjct: 121 TSKSEEPAYIFVKTEKQLK--------RLYL---KEIQFIEGMENYIVIHTLTSKE-IVH 168 Query: 177 LTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSR 227 L L++++ P ++ HR ++VNL+++Q I + L++ +PVSR Sbjct: 169 LRLKSIQETLPAQIFMQVHRSFIVNLSYVQAI------EGNLLIIGEHKIPVSR 216 >UniRef50_A1HSX1 Response regulator receiver protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSX1_9FIRM Length = 269 Score = 105 bits (263), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 79/254 (31%), Positives = 132/254 (51%), Gaps = 31/254 (12%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K +I+DDE + + L++ DI++ + +N +E + + + D++F DI+MP +S Sbjct: 30 VKTVIIDDEQPICDEIEYLLKQHIDIDVAAKFTNPLEALEYISEQGCDLVFADIKMPGMS 89 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ--E 118 GLE+ L P +VF+TAF E+A++AF+ A Y+ KPI E +L + ++++R E Sbjct: 90 GLELARRLSVLRATPLVVFITAFQEHALEAFDTPAVGYITKPIMEDKLARLMSKVRCLIE 149 Query: 119 RSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELT 178 R+ Q + A+ I T +I L ++ + V+V + + E LT Sbjct: 150 RTYQ------AGRPAVSKICVTTGGKIIPLDKNEIVLAYVKDKDVFVRT-KTSEYMATLT 202 Query: 179 LRTLES---RTPLLRCHRQYLVNLAHLQEI----------RLEDNGQAELILRNGLTVPV 225 L+ +E+ + LR HRQY+VNL ++EI R++D Q E VPV Sbjct: 203 LQEIENILDGSNFLRVHRQYIVNLDMVREIIPWFHGSYLLRMDDCRQEE--------VPV 254 Query: 226 SRRYLKSLKEAIGL 239 SR K LK +GL Sbjct: 255 SRARTKVLKNILGL 268 >UniRef50_B8KBX1 Transcriptional regulator n=4 Tax=Vibrio RepID=B8KBX1_VIBPA Length = 263 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 75/251 (29%), Positives = 130/251 (51%), Gaps = 28/251 (11%) Query: 2 IKVLIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 + +I DDEPL R +L L + ++EI G N + + + +P + FLDI+MP+ Sbjct: 6 LTAIIADDEPLLRFHLDKALADVWPELEIKGLAENGEQALELIEAHQPTIAFLDIRMPKC 65 Query: 61 SGLEMVG-MLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 G++ +++ +VF+TA+DEYA++AFE +A DYLLKP+ E RLE+ + RL+Q+ Sbjct: 66 DGMQAAKRLMENNSATTVVFVTAYDEYAVQAFENNAADYLLKPLSETRLEQCVTRLKQKF 125 Query: 120 SKQDVSLLPENQ---------------QALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVY 164 S + P+ Q L +I + I+L+ + +V + + Y Sbjct: 126 SVDATAQAPDMQALFQQMQQLAEQKTPNYLSWIRASKGEDIHLISVSEVLYF--KAEDKY 183 Query: 165 VTSHEGKEGFT-ELTLRT-----LESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELI 216 V+ + ++ T E LRT L P + HR +VN++ ++ ++ E G+ +I Sbjct: 184 VSLFQQEQNKTVEYVLRTSLKELLTQLDPDQFWQIHRSTIVNVSAIERVKKEFTGKMVVI 243 Query: 217 LRNGLTVPVSR 227 + G +PVSR Sbjct: 244 V-GGEKLPVSR 253 >UniRef50_A5FL89 Transcriptional regulator, LytR/AlgR family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FL89_FLAJ1 Length = 229 Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 75/240 (31%), Positives = 119/240 (49%), Gaps = 26/240 (10%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I +IVDDEPLA + L + + ++ +VG NA+E D++FLDIQMP ++ Sbjct: 3 IDCIIVDDEPLAIKLLENHISKIEELRLVGTAGNALEAYKLTKLKTVDLIFLDIQMPDLT 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS- 120 G++ + L +++P +F TA+ E+A++ FE A DY+LKPI R K + R+ + S Sbjct: 63 GIDFLKSL--KNKPKTIFTTAYREFAVEGFELEAVDYILKPITFDRFFKAVERVLRHDSD 120 Query: 121 --KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELT 178 K+D +L N Y + +K + F S+ + V V K + Sbjct: 121 YVKEDFLMLKSNGLQ------------YKINLKSILFFESQGNNVKVVLKNEKPLIVKYK 168 Query: 179 LRTLE---SRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKE 235 L LE S +R HR ++VN + + G ELI+ N +VPV R Y + +E Sbjct: 169 LSDLENDLSSLGFVRIHRSFIVNSKEINAL-----GNTELIIEN-FSVPVGRSYKSNYEE 222 >UniRef50_C6I7A6 Two-component system response regulator n=13 Tax=Bacteroides RepID=C6I7A6_9BACE Length = 245 Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 75/249 (30%), Positives = 122/249 (48%), Gaps = 21/249 (8%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MIK + VDDEPLA E L ++ ++++ C +A + + + D++F+DI MP + Sbjct: 1 MIKCIAVDDEPLALEQLTGYIARVPFLQLIASCQDAFSAMQVLSEEEVDLMFVDIHMPDL 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR---- 116 +GL++V L +P IVF TA+ EYA++ F+ A DYLLKP + L K + R Sbjct: 61 NGLDLVRSL--VVKPLIVFTTAYPEYAVEGFKVDAVDYLLKPFEFQDLLKAADKARRQFE 118 Query: 117 ---QERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYV-TSHEGKE 172 Q+ + L E +L F+ +I + + D+ ++ V + T K Sbjct: 119 YHLQDNGGGTETDLLEKDGSL-FV--KSEYKIIRINVADICYIEGMSEYVRIYTDAADKP 175 Query: 173 GFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRY 229 T L++R LE R P +R HR Y+VNL + E+ + +I + +PV Y Sbjct: 176 VVTLLSMRKLEERLPQEMFMRVHRSYIVNLRKITEV-----SRLRIIFNKNIYIPVGDNY 230 Query: 230 LKSLKEAIG 238 + E I Sbjct: 231 KERFTEYIN 239 >UniRef50_A9U7N0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U7N0_PHYPA Length = 374 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 55/129 (42%), Positives = 82/129 (63%), Gaps = 1/129 (0%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+K IVDDEPLAR+ L L + IVGE + + ++ ++ PDV+FLDIQ+ Sbjct: 212 MLKGFIVDDEPLARDELAYLLGRTRQVHIVGEADSLETALQSIAEMEPDVVFLDIQLAED 271 Query: 61 SGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +G+E+ L E P IVF TA+DEYA++AFE +A DY+LKP +E R+ KT+ ++ + R Sbjct: 272 NGMELAKQLSVLEQVPDIVFATAYDEYALQAFEVNALDYILKPFEEERVRKTVDKVMKLR 331 Query: 120 SKQDVSLLP 128 S ++ P Sbjct: 332 SAREKRAAP 340 >UniRef50_C7MZZ5 Response regulator of the LytR/AlgR family n=3 Tax=Actinomycetales RepID=C7MZZ5_SACVD Length = 255 Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 79/240 (32%), Positives = 123/240 (51%), Gaps = 11/240 (4%) Query: 4 VLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGL 63 +L VDD P A ++L L+E ++ V + V + + D +FLDI MP + GL Sbjct: 1 MLAVDDVPAALDDLCGMLREAPEVAEVAAAGDTVAALKRLQSEEFDAVFLDIAMPGLDGL 60 Query: 64 EMVGMLDPEHRP-YIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSKQ 122 E +L RP IVF+TA+D++A+ AF A DYLLKP+ RL LAR+ + S + Sbjct: 61 EFASLLKKLARPPAIVFVTAYDQHAVAAFGIGAVDYLLKPVRAERLADALARVSRIVSTE 120 Query: 123 DVSLLPENQ---QALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 P+ Q AL +P R ++ +DV +V + V + +H G + + Sbjct: 121 KAGKTPQRQPAPDALAALPVESGGRTRYVRRQDVRYVEAHGDYVRLHTHSGVH-LVRMPI 179 Query: 180 RTLE---SRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT-VPVSRRYLKSLKE 235 LE + +R HR +LV L+ ++E+R + G L+ L VPVSRR+ + L+E Sbjct: 180 SRLEEYWANAGFVRTHRGFLVALSAVRELRSDSVGG--LLAHTDLGDVPVSRRHARHLRE 237 >UniRef50_A1ZFR4 Two-component system response regulator protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZFR4_9SPHI Length = 243 Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 70/241 (29%), Positives = 131/241 (54%), Gaps = 23/241 (9%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K L+VDDEPLA + ++ ++ + +E+VG C NA+E + +++ D++FLDIQMP ++ Sbjct: 3 LKCLLVDDEPLAHKIIQNYIARLNTLEVVGSCYNAIEALNFLYEHEVDLMFLDIQMPELN 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL+M+ L H P ++ TA+ E+A++++E DYLLKPI R K + R+ + S+ Sbjct: 63 GLDMLKTL--PHSPKVILTTAYTEFALESYEFGVVDYLLKPIAFPRFLKAVNRVIDDSSE 120 Query: 122 QDVSLLPE--NQQALK-------FIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSH-EGK 171 S P NQQ ++ + + + + ++ F+ + G Y+ E K Sbjct: 121 LQRSEKPPVINQQYSNANESLNGYLFLKENQVTHKVFLNNILFIQAY--GNYLKFFTEDK 178 Query: 172 EGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRR 228 T++ + ++ P +R H+ Y+V+L+ + +I + Q ++I T+PV + Sbjct: 179 MIMVADTMKNIMAQLPESDFVRVHKSYIVSLSKIDQI---EGNQIKII---NHTLPVGNK 232 Query: 229 Y 229 Y Sbjct: 233 Y 233 >UniRef50_C6W927 Two component transcriptional regulator, LytTR family n=19 Tax=Actinomycetales RepID=C6W927_ACTMD Length = 281 Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 81/253 (32%), Positives = 127/253 (50%), Gaps = 23/253 (9%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKL----RP-DVLFLDIQ 56 ++VL VDDEP A E+L L+ + V +A + + +H+ +P D +FLDI+ Sbjct: 23 LRVLAVDDEPPALEDLVYLLRSDPRVGHVEAVGDATKALRTLHRAMDAGQPVDAVFLDIR 82 Query: 57 MPRISGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL 115 MP + GL++ +L P IVF+TA E A++AFE A DYLLKP+ + RL +++ R+ Sbjct: 83 MPGLDGLDLARVLSRFAQPPPIVFVTAHQEPAVEAFELKALDYLLKPVRQERLAESVHRI 142 Query: 116 RQERSKQDVSLLPENQQAL---------KFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT 166 E + P Q A + IP +++ ++ +V + G Y Sbjct: 143 VHEVLESRPVEQPAPQAAPVERAPDVGDEVIPVELGGITRFIRLAEIRYVEA--HGDYAR 200 Query: 167 SHEGK-EGFTELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT 222 H G L LE R +R HR +LV+L H+ E+RLED + I G Sbjct: 201 LHTATGSGLVRAALNGLEERWRSAGFVRIHRSHLVSLGHIDELRLEDGHLSVNI--GGAV 258 Query: 223 VPVSRRYLKSLKE 235 +PVSRR+ + L++ Sbjct: 259 LPVSRRHARHLRQ 271 >UniRef50_Q2RI16 Transcriptional regulator, LytR/AlgR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RI16_MOOTA Length = 245 Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 117/212 (55%), Gaps = 10/212 (4%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+ +I DD + R L+E ++++I+ E + + + V +LRPD+ FLDI+MP Sbjct: 1 MLTGIIADDNEIERLYFCKLLEETNEVKILAEAQDGLTVLDLVTRLRPDIAFLDIEMPGP 60 Query: 61 SGLEM---VGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ 117 +GLE+ + L PE IVF TA+ ++A++AF ++ DYLLKP D R+ KT+A++++ Sbjct: 61 NGLEVAREILTLAPE--TLIVFFTAYRDFAVEAFALNSVDYLLKPFDAFRVRKTVAKVQE 118 Query: 118 ERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL 177 + + ++V P + L + RI+L+ + ++ F+ + + K+ T Sbjct: 119 KLAAREVIKKPGGGR-LDKLAIRNKGRIFLINLDEIIFIEKSGKNTTIIHTDRKDFHTPQ 177 Query: 178 TLRTLESR----TPLLRCHRQYLVNLAHLQEI 205 T+ LE + + R H+ YL+NL ++ I Sbjct: 178 TIAELEQQLARHSFFQRVHKSYLINLNMVESI 209 >UniRef50_Q47KY1 Response regulator receiver n=1 Tax=Thermobifida fusca YX RepID=Q47KY1_THEFY Length = 264 Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 81/247 (32%), Positives = 125/247 (50%), Gaps = 21/247 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++VL VDD PLA L L+ ++ V + + + + R D +FLDI MP + Sbjct: 8 LRVLAVDDVPLALTELCRLLRAAPEVGEVVAADDPISALRNIQADRFDAVFLDISMPGLD 67 Query: 62 GLEMVGML----DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ 117 G+E+ +L DP P IVF+TA +E+A+ A+ A DYLLKP+ RL L ++ + Sbjct: 68 GVELANLLSKLSDP---PVIVFVTAHEEHAVTAYGIGAVDYLLKPVRAERLAMALTKVVR 124 Query: 118 ERSKQDVSLLPE---NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG- 173 S + P A+ +P R ++ DV FV + +G YV H EG Sbjct: 125 MLSAGTAPVTPHRVRRPDAMAVLPVETAGRTRYVRRSDVRFVEA--NGDYVRLHT-PEGV 181 Query: 174 -FTELTLRTLE---SRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT-VPVSRR 228 + + LE + + LR HR YLV L+ ++E+R + +G L+ L VPVSRR Sbjct: 182 HLVRMPISRLEEYWADSGFLRVHRGYLVALSAIRELRSDSSGG--LLAHTDLGDVPVSRR 239 Query: 229 YLKSLKE 235 + + L+E Sbjct: 240 HARELRE 246 >UniRef50_C0Z807 Two-component response regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z807_BREBN Length = 261 Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 75/256 (29%), Positives = 131/256 (51%), Gaps = 27/256 (10%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 ++K +I+DDEP L L++ DI++ +N +E + + PD+L LDIQMP + Sbjct: 16 LLKTIIIDDEPAICSELEYLLKKYIDIQVDAIYTNPLEALPHMLNSEPDLLMLDIQMPGM 75 Query: 61 SGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +GLE L+ + P IVF TA+ E+A++AF A YL KPI E++L+ + ++R R Sbjct: 76 NGLEFAKTLNQMSNPPLIVFSTAYHEHALEAFSTLAVGYLTKPIMESKLDDVIQKVRTLR 135 Query: 120 SKQDVSLLPENQQALKFIPCTGHS-RIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELT 178 + ++ ++ C S +I + + + F R +YV + E + +L+ Sbjct: 136 KRAAMNDRTATVPLMEEHVCIRKSNKIIPIPVGQIYFAFVREKDLYVATKESIDK-CDLS 194 Query: 179 LRTLE-----SRTPLLRCHRQYLVNLAHLQE----------IRLEDNGQAELILRNGLTV 223 L LE SR+ R HR Y++N+ H++E I++ D+ Q + + Sbjct: 195 LNELEEILNRSRS-FFRSHRNYILNVKHIKEIIPWFNHTYLIKMNDDSQTD--------I 245 Query: 224 PVSRRYLKSLKEAIGL 239 PVSR +K+ + + L Sbjct: 246 PVSRGRMKAFRGLMNL 261 >UniRef50_C0ZK91 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZK91_BREBN Length = 383 Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 59/140 (42%), Positives = 89/140 (63%), Gaps = 3/140 (2%) Query: 2 IKVLIVDDEPLARENLRVFLQEQ-SDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 ++ L+VDDE L +L+ L++ +++VG +N +E I L+PDV+FLDI MPRI Sbjct: 1 MRALLVDDEQLPLMHLQRLLEKDVGGVKVVGAYTNPLEAIDQAISLQPDVVFLDINMPRI 60 Query: 61 SGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 SGLE+ L ++ P IVF+T +D+YA+ AFE A DY++KP+ RL+KT+ RLR ER Sbjct: 61 SGLEIGERLQGIDNSPEIVFVTGYDKYAVDAFELCALDYIMKPVQLQRLQKTMDRLR-ER 119 Query: 120 SKQDVSLLPENQQALKFIPC 139 K P ++++ I C Sbjct: 120 IKSAKEATPVKEESVVSIQC 139 >UniRef50_B1I2Q5 Response regulator receiver protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I2Q5_DESAP Length = 260 Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 72/225 (32%), Positives = 107/225 (47%), Gaps = 11/225 (4%) Query: 4 VLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGL 63 VLI +D+P R L+ +E + +VGE N E + KLRP ++F+DI +P G+ Sbjct: 5 VLIAEDDPAMRRVLKKIAEEDGRLRVVGEAGNGTEALALFEKLRPRIVFVDIDLPLKDGV 64 Query: 64 EMV-GMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR------ 116 + + E R + VF+TA D+Y AFE +A DYL+KP RL +TL RL Sbjct: 65 SLARDIFAREPRTHFVFITASDDYREAAFEVYACDYLVKPFRLERLRQTLTRLADVLAGS 124 Query: 117 --QERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVS--SRMSGVYVTSHEGKE 172 R+ D+S+ SR +L K++ FV+ R + VY + Sbjct: 125 AGDYRAGPDLSVSAGGPAGDTLFLLRTDSRTAVLDRKEILFVTREGRQTVVYHVHGRLET 184 Query: 173 GFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELIL 217 G TL P R H+ ++VNL ++EI G ELI+ Sbjct: 185 GDNLKTLADKLGGYPFFRTHKGFIVNLRMVREIVPAGRGTYELIM 229 >UniRef50_A5FCC1 Two component transcriptional regulator, LytTR family n=6 Tax=Bacteroidetes RepID=A5FCC1_FLAJ1 Length = 243 Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 61/210 (29%), Positives = 111/210 (52%), Gaps = 7/210 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K + VDDEPLA + + F+ + +++ C NAVE + + + +PD++FLDI MP ++ Sbjct: 4 LKCIAVDDEPLALKLVETFIDQTPFLQLSASCDNAVEAMSLIREKQPDLVFLDINMPNLT 63 Query: 62 GLEMVGML--DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 G+E+ +L P P IVF TA++ YAI+ ++ +A DYLLKP + ++ Q Sbjct: 64 GMELARLLQEQPGQVPKIVFTTAYNHYAIEGYKVNAVDYLLKPFSYEEFLRAANKVLQIT 123 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL-T 178 + + P +FI + + +K++ ++ S V V + ++ L + Sbjct: 124 EEASNNFQPITADD-EFIFLKVEYQWVRISLKEILYIESLKDYVKVHLDDNQKAILSLIS 182 Query: 179 LRTLESRTP---LLRCHRQYLVNLAHLQEI 205 L+ LE + P +R HR ++V+L + I Sbjct: 183 LKALEEKLPSAKFMRVHRSFIVSLDKINAI 212 >UniRef50_B0TE50 Transcriptional regulator, lytr/algr family n=2 Tax=Bacteria RepID=B0TE50_HELMI Length = 316 Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 55/123 (44%), Positives = 75/123 (60%), Gaps = 1/123 (0%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 +I+ +VDDE +R LR L++ D IVGE E + + L DVLFLDIQM + Sbjct: 2 IIRTFLVDDEAPSRRELRFLLEKHPDCRIVGEAGGGEEALDILADLPVDVLFLDIQMHDL 61 Query: 61 SGLEMVGMLDPEHR-PYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 GL + L ++R P +VF TAFD YA+ AF+ HA DY+LKP D RLE T R+R+ Sbjct: 62 DGLSVARQLLEQNRLPLVVFATAFDAYALSAFDVHALDYILKPFDPERLEATWRRVRERL 121 Query: 120 SKQ 122 ++Q Sbjct: 122 AQQ 124 Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 30/66 (45%), Positives = 39/66 (59%), Gaps = 3/66 (4%) Query: 177 LTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSL 233 LTL+ LE R R HR +LVNL+ ++EI NG LIL + VPVSR Y + L Sbjct: 251 LTLQELEDRLDPDRFCRTHRAFLVNLSAIREIVPWFNGAYNLILHDKSEVPVSRHYARQL 310 Query: 234 KEAIGL 239 K+ +GL Sbjct: 311 KDLLGL 316 >UniRef50_A1ZKV0 Two-component system response regulator protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZKV0_9SPHI Length = 235 Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 66/234 (28%), Positives = 125/234 (53%), Gaps = 16/234 (6%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRP-DVLFLDIQMPR 59 ++ +IVDDE ++R+ + F+++ + + C NA++ I + K + D+LFLD++MP Sbjct: 2 LMNCMIVDDEDISRKVVEHFVEKTDSLTLKHLCDNAIDAINILKKDKSVDILFLDVEMPE 61 Query: 60 ISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 ++GLE+V L IV +T+ EYA++AFE + DY++KPI+ R K +AR+ ++ Sbjct: 62 MTGLELVAALKST-SICIVLITSKMEYAVEAFEYNVTDYIIKPINYPRFLKAVARVEEQL 120 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 Q S N L + +I +++++V+++ + +S + K+ T+ Sbjct: 121 QGQSQS---GNDTELSALFVKTDYKIVKIELEEVSYIEA-LSDYVIIYCGDKKYVVHSTM 176 Query: 180 RTLESRTP----LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRY 229 + +E + LR HR Y+VN H++ I Q + G ++P+ R Y Sbjct: 177 KGIEKKLAPAKNFLRVHRSYIVNKQHIESI------QDLYVEIGGKSIPIGRSY 224 >UniRef50_C8W4Y1 Two component transcriptional regulator, LytTR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W4Y1_DESAS Length = 233 Score = 103 bits (256), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 73/242 (30%), Positives = 121/242 (50%), Gaps = 17/242 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++V+I +D P+ L+ L +SDIEI+GE S+ E + KL+P+V FLDI MP IS Sbjct: 1 MRVIIAEDNPVEMRYLKNLLSRESDIEIIGEVSDGWEATKMISKLQPEVAFLDISMPGIS 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+++V D R IV +TA EYA+ AFE + DYLLKP++ R+ T+ RLR+ Sbjct: 61 GMDLVRKFD--GRVIIVLVTAHHEYALDAFEAGSMDYLLKPVEPERVSLTIRRLRK---- 114 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSS-RMSGVYVTSHEGKEGFTELTLR 180 +L + I I +++ + F+ ++ E TL Sbjct: 115 ----ILSRKTRYSGRININTKDSIIAVEIDSIIFIEKVPLAKKIKIQTVNNEYIVSGTLN 170 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT--VPVSRRYLKSLKE 235 E + +R H+ +++N L+++ + ++ L +G+ VSR+Y +K Sbjct: 171 EFEDKLKSLGFIRTHKSFIINPDKLEKM-IPWGDKSYLAKMHGVKKEALVSRKYAGMVKS 229 Query: 236 AI 237 AI Sbjct: 230 AI 231 >UniRef50_B1ZXP5 Two component transcriptional regulator, LytTR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZXP5_OPITP Length = 242 Score = 102 bits (255), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 76/247 (30%), Positives = 116/247 (46%), Gaps = 29/247 (11%) Query: 3 KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 + LIVDDE LAR L L + +IE+ E + E A+ +LRP++LFLDIQMP SG Sbjct: 5 RALIVDDERLARRELAYLLADHPEIEVAAEAGSVGEAAAALERLRPELLFLDIQMPGESG 64 Query: 63 LEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL------- 115 ++ R ++F+TA D++A++AFE +A DYL+KP++ ARL + R Sbjct: 65 FDLFERARVTAR--VIFVTAHDQFALRAFEVNALDYLMKPVNPARLRVAVDRFLGRGAPP 122 Query: 116 ---RQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 R D S+ QA +FI + +A + + + S G Sbjct: 123 PGPSAGRINYDDSVFVTIDQAPRFI-----------AVASIACILAEGDYTRLISTTGPI 171 Query: 173 GFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVP--VSR 227 G ++ E P R R +VN AH+ NG ++ L+ L P +SR Sbjct: 172 GLVLKPMKEWEQLLPERHFARIQRSAIVNCAHVARFEPWFNGAMQVHLK-ALPEPLTMSR 230 Query: 228 RYLKSLK 234 RY + + Sbjct: 231 RYARQFR 237 >UniRef50_C7PE44 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PE44_CHIPD Length = 244 Score = 102 bits (255), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 74/241 (30%), Positives = 130/241 (53%), Gaps = 30/241 (12%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + +I+DDEPLARE L +++E +++V C+N VE I + + D++FLDIQMP+++ Sbjct: 1 MNCVIIDDEPLAREGLSSYVREVDFLQLVATCTNPVELIRLLDEHPVDLIFLDIQMPKMN 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G++ + ++ + P ++ TAF YA++ F+ + DYLLKPI R K ++K Sbjct: 61 GIDFLKIV--QKPPMVIITTAFPSYALEGFQLNVMDYLLKPITFDRFFKA-----ANKAK 113 Query: 122 QDVSLL--PENQQALK-------FIPC-TGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGK 171 LL P + A FI C + + +I+ D+ +V + V + + +GK Sbjct: 114 DYYQLLHKPVGEAAKTAKTEDYFFIKCGSKYEKIFF---DDILYVQGMQNYVTIHTRKGK 170 Query: 172 EGFTELTLRTLE---SRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRR 228 T L L+ LE R +R H+ Y+V ++ ++ I E N E+ +++ +P+SR Sbjct: 171 Y-MTLLYLKNLEENLDRKAFIRVHKSYIVAVSKIEGI--EGN---EIFIQSD-KIPISRN 223 Query: 229 Y 229 Y Sbjct: 224 Y 224 >UniRef50_A5FB58 Two component transcriptional regulator, LytTR family n=3 Tax=Flavobacteriales RepID=A5FB58_FLAJ1 Length = 233 Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 62/240 (25%), Positives = 124/240 (51%), Gaps = 15/240 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IK +++DDEPLA + L+ + +D E++G +N++E + ++ D +FLDI MP ++ Sbjct: 3 IKCVLIDDEPLAIKVLQNYFNNFTDFEVIGTFNNSLEALDFINSTSVDAVFLDINMPMMT 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS- 120 G E++ ++ E++ ++ TAF E+A ++++ DYL+KPI R K + ++ E + Sbjct: 63 GFELISLI--ENKTKVIITTAFREFAAESYDLDVLDYLVKPIPLPRFIKCINKITTEYNL 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 K ++ + + FI ++ + ++++ F+ + V + + K T +L Sbjct: 121 KNNIKIDTTKGDSHIFIKV--DKKMMKINIEEILFIEGMKEYIKVVTPD-KTYITHKSLT 177 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 +L P LR H+ Y++ L ++ I + I T+P+ R Y K +K I Sbjct: 178 SLSEELPADRFLRIHKSYVIALNKVKSI------EGNRIQIQSYTIPIGRNYSKDVKNRI 231 >UniRef50_Q9KL96 Uncharacterized response regulatory protein VC_A0850 n=25 Tax=Vibrio RepID=Y0G0_VIBCH Length = 261 Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 75/247 (30%), Positives = 127/247 (51%), Gaps = 27/247 (10%) Query: 5 LIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGL 63 ++ DDEPL R +L L E +EIV N + A+ + +PDV+FLDI+MP++ G+ Sbjct: 9 VLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDIRMPKMDGI 68 Query: 64 EMVG-MLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE---- 118 E+ +L P +VF+TA+DEYA+ AFE HA DYLLKP+ +RL +L+Q+ Sbjct: 69 EVARRLLQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEKLQQQLRRN 128 Query: 119 --RSKQDVSLLPENQQALK--------FIPCTGHSRIYLLQMKDVAFVSS--RMSGVY-- 164 S L+ + +Q + ++ + I+L+ + ++ +V + + +Y Sbjct: 129 VAPSNDLAQLMSQFEQLTRTVKPQYQVWLKASKGEEIHLIAVNELLYVKAEDKYLSLYKV 188 Query: 165 --VTSHEG--KEGFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG 220 T+HE + EL L L+ + HR +VN+ + ++ D G + + Sbjct: 189 HGATTHEYLLRSSLKEL-LAQLDPNQ-FWQIHRSIVVNVGKIDKVT-RDFGGKMWVHIDR 245 Query: 221 LTVPVSR 227 L +PVSR Sbjct: 246 LQLPVSR 252 >UniRef50_A1HTW5 Response regulator receiver protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTW5_9FIRM Length = 215 Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 49/116 (42%), Positives = 80/116 (68%), Gaps = 1/116 (0%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+V+IVDDE AR +R L+ SDI +V E + + + A+ + +P +LFLDI+MP ++ Sbjct: 8 IRVMIVDDEEPARNEIRYLLERFSDIVVVAEAESGKQALRAITRTQPHLLFLDIEMPGMN 67 Query: 62 GLEMVG-MLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR 116 G+++ +++ P++VF TA +E+A+KAF+ +A DYLLKP + RLEK + R+R Sbjct: 68 GIDLASRIIEAGISPFLVFATAHEEFAVKAFDVNATDYLLKPFSQERLEKCINRVR 123 >UniRef50_C7PAR0 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PAR0_CHIPD Length = 237 Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 62/213 (29%), Positives = 113/213 (53%), Gaps = 14/213 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ + VDDEPLA + L +++ +E+V +C++A E I + + D++FLDIQMP ++ Sbjct: 3 LRCIAVDDEPLALDLLEDNIRQVPFLEMVAKCADAFEAIKVLQETTVDLIFLDIQMPGLT 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ--ER 119 GL+ + L H+P I+ +TA+++YA++ FE DYL+KP+ R K + R+ + Sbjct: 63 GLQFIQSL--AHKPMIILITAYEKYALEGFELDVTDYLVKPVSLPRFIKACNKARELHQL 120 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSH---EGKEGFTE 176 Q ++ P F+ +S LL++ + Y+ H K T Sbjct: 121 KHQQLTAAPGTTPEFFFV----NSDYSLLKINVADIIWIEALKDYIRIHLTGTAKPVVTR 176 Query: 177 LTLRTLESRTP---LLRCHRQYLVNLAHLQEIR 206 + L+ +E + P +R H+ Y++ +AH+ IR Sbjct: 177 MPLKQVEEQLPPARFIRIHKSYIIAVAHITAIR 209 >UniRef50_Q15WR3 Response regulator receiver protein n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15WR3_PSEA6 Length = 239 Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 75/243 (30%), Positives = 120/243 (49%), Gaps = 11/243 (4%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M + +++DDE LARE + ++ E+V E S+ + + +PD+ FL IQ+ Sbjct: 1 MYRCVVIDDEALARERIAQYISRSPLCEVVAEASSFENAKQLILEQQPDICFLGIQIIGG 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SG+E+ L + VF TA EYAI AFE A DYLLKP ++RL + +A++ R Sbjct: 61 SGVELAKELHNSVSCHWVFTTAHSEYAIAAFELEATDYLLKPFQDSRLAQVIAKIH--RK 118 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSH-EGKEGFTELTL 179 Q ++ E ++ L P + + +D+ +V + S YV + EGK TL Sbjct: 119 HQSITPKYETRRQL---PIRSVGSVKFINTQDIIWV--KGSANYVELYCEGKMHLHRETL 173 Query: 180 RTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEA 236 L T +R HR +VN+ ++ + E + L L NG V + + Y L A Sbjct: 174 SALAQTLDPTQFIRVHRSAIVNIDYVHSLNSELGRFSLLQLDNGDEVKIGQSYKAQLLSA 233 Query: 237 IGL 239 +G+ Sbjct: 234 LGV 236 >UniRef50_C8W4Z0 Two component transcriptional regulator, LytTR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W4Z0_DESAS Length = 242 Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 63/238 (26%), Positives = 127/238 (53%), Gaps = 13/238 (5%) Query: 3 KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 +VLIV+D RE+++ + Q+D +VGEC N E + V K P+++ LDI++P +G Sbjct: 5 RVLIVEDNEDVREHIKTIINTQADFTVVGECGNGNEVLDLVEKYHPNIVLLDIEIPSRTG 64 Query: 63 LEMVGMLDPEHRP--YIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +++ L E +P +++F+T E+ + AFE + DY+LKP E R+ +L R + + Sbjct: 65 IDVAKDL-AELKPGIFLIFITGHSEFCLTAFEIKSLDYILKPFTEERVISSLLRAKSFLN 123 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL--T 178 + + + ++ ++K T I ++ K ++++ ++ G+ S G+ + T Sbjct: 124 CLNPAFVNMSRISIK----TRGGTIIFIEAKSISYI-EKVKGIKYISIYTDHGYYNITET 178 Query: 179 LRTLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG-LTVPVSRRYLKSL 233 L +E++ P RCH+ +++NL ++ + + ++L N V VS+ + L Sbjct: 179 LNDIEAKLPEQFYRCHKSFIINLERVKALVRDGLNTFHVLLNNSKQKVSVSKYHYDEL 236 >UniRef50_A6LTH8 Two component transcriptional regulator, LytTR family n=4 Tax=Clostridium RepID=A6LTH8_CLOB8 Length = 247 Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 66/212 (31%), Positives = 114/212 (53%), Gaps = 10/212 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IKVLIVDDE R ++ L + E+VGE N E I + RP+V+F DI+MP+ + Sbjct: 3 IKVLIVDDEIGIRTIIKKILDKSGGFEVVGETDNGEEAIDIFKEHRPNVVFFDIEMPKCN 62 Query: 62 GLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR--QE 118 G++ +L D + + I+F TA EY +AF+ +AFDYL+KP R+ +TL R++ + Sbjct: 63 GIDCARILTDIDPKTIIIFATAHAEYMSEAFQLYAFDYLIKPFKIERVMQTLDRIKNLNK 122 Query: 119 RSKQD-VSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF-TE 176 S D + + ++++ L + I + K++ V S + + + F T Sbjct: 123 PSYGDGIDKIIKHEKGLDKLMIKNKEGISFVDTKEIVLVQREESSTVI--YTKTDSFTTS 180 Query: 177 LTLRTLESR---TPLLRCHRQYLVNLAHLQEI 205 ++L +E + T R H+ Y++NL+ + +I Sbjct: 181 ISLSDIEEKLDHTQFFRSHKSYIINLSLITKI 212 >UniRef50_Q12QZ1 Transcriptional regulator, LytR/AlgR family n=1 Tax=Shewanella denitrificans OS217 RepID=Q12QZ1_SHEDO Length = 232 Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 66/242 (27%), Positives = 127/242 (52%), Gaps = 14/242 (5%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+ V IV+DE ARE L++ L + DI ++GE + + I +++L P+V+FLDI++ Sbjct: 1 MLSVFIVEDEFHAREKLKLQLSQLPDITLLGEAEHLTDAIERINQLAPNVVFLDIELGEH 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G + L+ + ++F TA+ E+A+KAF+ A DYLLKP + ARL + L+R+ E Sbjct: 61 NGFSLFDNLNI--KTQVIFTTAYSEFALKAFDNGAVDYLLKPFNLARLSQALSRIAAE-- 116 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 ++ L E + I ++ Y+L+ +++ F + ++ + + + + + TL Sbjct: 117 --NIQLAAEKVK----IHAKSGNKTYILEQENIVFFQTNLN-MTIAQTKARNYVIDKTLE 169 Query: 181 TLESR--TPLLRCHRQYLVNLAHLQEIRLEDNGQAEL-ILRNGLTVPVSRRYLKSLKEAI 237 L+ + +R HR ++N + + +NG ++ + V SR +K+ Sbjct: 170 QLDLALGSHFVRVHRNAIINTQRVDNLMRLENGNYQIHFIDCDTNVITSRSGTNKIKQYF 229 Query: 238 GL 239 L Sbjct: 230 NL 231 >UniRef50_Q1VYF8 Two-component system response regulator protein n=2 Tax=Flavobacteriaceae RepID=Q1VYF8_9FLAO Length = 241 Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 70/221 (31%), Positives = 114/221 (51%), Gaps = 24/221 (10%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K LIVDDEPLA ++ + S ++IV EC +A E I +++ + D++FLDI MP++ Sbjct: 1 MKCLIVDDEPLAHRIIKNYCNNLSFLDIVKECHSAFEAINYLNENQVDLIFLDINMPKLK 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL+ + L + P I+ +A+ EYA++ +E + DYLLKP R K + + ++ Sbjct: 61 GLDFLRTL--SNPPLIIITSAYQEYAMEGYELNILDYLLKPFSFERFLKAINKAVSQKKL 118 Query: 122 QDVS-----------LLP--ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSH 168 D S LP ENQ+++ FI G + + +Q + ++ S G YV H Sbjct: 119 LDTSEKTPNIKVTPVSLPNNENQESI-FI--KGDKKTHQVQFDSILYLES--IGSYVKIH 173 Query: 169 EGKEGFTELT-LRTLESRTP---LLRCHRQYLVNLAHLQEI 205 E L L E++ P LR HR Y++ + + I Sbjct: 174 LENETIISLDRLTNFENKLPKNIFLRIHRSYIIAIKKVNTI 214 >UniRef50_C7PA86 Two component transcriptional regulator, LytTR family n=8 Tax=Bacteroidetes RepID=C7PA86_CHIPD Length = 235 Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 72/231 (31%), Positives = 122/231 (52%), Gaps = 21/231 (9%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ +I DDEP AR+ L+ ++ + +E+V C +AVE + K + D+LFLDI+MP +S Sbjct: 3 IRCVITDDEPYARKGLQGYISQIDFLELVAVCESAVELNTFLKKEQVDLLFLDIEMPYLS 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+E++ L H P ++F TA+++YA++ +E DYLLKPI R LR Sbjct: 63 GIELLKTL--AHPPKVIFTTAYEKYAMQGYELEVLDYLLKPISLDRF------LRAANKA 114 Query: 122 QDVSLLPENQQALK-FIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSH-EGKEGFTELTL 179 D L E + + + S++ + ++D+ F + Y+T H + K+ T LTL Sbjct: 115 FDYFNLQEQVKPREDYFFIKVDSKLEKVLVEDILFAEGMEN--YITIHTKQKKMITHLTL 172 Query: 180 RTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSR 227 + L+ P ++ H+ Y+ + + I + ++L G VPVSR Sbjct: 173 KMLQEHLPADKFIQPHKSYIAAIDKIDAI------EGNVLLLGGYQVPVSR 217 >UniRef50_C0A760 Response regulator receiver protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A760_9BACT Length = 247 Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 73/239 (30%), Positives = 124/239 (51%), Gaps = 20/239 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 I+ +I DDEP +L ++ +EI + + AV +LRPD+ FLD++MP + Sbjct: 3 IRAIIADDEPYLAAHLASMIRAAWPAVEIADVVHDGHAAVEAVARLRPDLAFLDVRMPGL 62 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G+E+ H +VF+TA+DEYA+ AFE A DYLLKP+ E RL +T+ RL+ Sbjct: 63 NGIEVGWRATGTH---VVFVTAYDEYAVAAFELGAIDYLLKPLTEERLTRTINRLKPYFC 119 Query: 121 KQDVSLLPENQQALKF-----IPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE--G 173 S + QA+ F + +G + + ++ DV F + +G Y+ EG++ G Sbjct: 120 ---FSCPRQRHQAVDFPRLLRVVSSGGNEHFFIRPMDVLFFQT--AGNYLLV-EGRDRRG 173 Query: 174 FTELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRY 229 +L L S+ ++ HR LVN+ + +R + +G + + + VSR++ Sbjct: 174 MMRSSLSELRSQLDPCQFVQIHRGTLVNIDAVDCVRRQGHGAVVTLFEKNVELRVSRQF 232 >UniRef50_B1HY70 Hypothetical response regulatory protein n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1HY70_LYSSC Length = 384 Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 65/157 (41%), Positives = 92/157 (58%), Gaps = 19/157 (12%) Query: 2 IKVLIVDDEPLARENLRVFLQEQS--DIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 +++++VDDE L+ + L+ L+E IEIVGE +++++ I + L+P V+FLDI MP Sbjct: 1 MRIVLVDDEYLSLKRLKTLLEESHVPGIEIVGEYTDSLKVIEEIQNLQPSVVFLDIVMPD 60 Query: 60 ISGL---EMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR 116 + GL E + L P+ IVF T FD+YA+ AF HA DYLLKPI RLEKTL RL Sbjct: 61 MDGLALGEKIQELLPDVE--IVFTTGFDQYALDAFNLHAVDYLLKPIQITRLEKTLDRLE 118 Query: 117 QERSKQD--------VSLLPENQQALKFIPCTGHSRI 145 Q +K +SL L+ I GH++I Sbjct: 119 QINNKHKKRVVNSTIISLFG----GLQVISPDGHTQI 151 >UniRef50_A6ER53 Putative two-component system response regulator n=2 Tax=Bacteroidetes RepID=A6ER53_9BACT Length = 228 Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 66/240 (27%), Positives = 121/240 (50%), Gaps = 22/240 (9%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K ++VDDE LARE ++ ++++ + +E V + +E + + + D+LFLDIQMP I Sbjct: 4 LKCIVVDDEELARELIKTYIEKLNHLECVATYESPLEALATIKSSKIDLLFLDIQMPDIK 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E +++ + I+F TA+ EYA+K++E +A DYL+KPI R + + + Sbjct: 64 GTEFAELIN-NTKTRIIFTTAYSEYALKSYELNALDYLVKPISFKRFLNAVEKFPITETA 122 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSH--EGKEGFTELTL 179 N K I +G+ ++ + +D+ ++ S YV H G + +L Sbjct: 123 --------NVIDHKIIIKSGY-ELHKVLTEDIIYIES--DSEYVNYHLTNGNKIMANQSL 171 Query: 180 RTLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 L + P LR HR Y++N + ++ D ++ + + +PVS Y +K + Sbjct: 172 SKLATSLPEHFLRVHRSYIINTQKVTGLKARD------LMLSDIKIPVSDSYFDIVKSTL 225 >UniRef50_B0MWM6 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B0MWM6_9BACT Length = 247 Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 72/249 (28%), Positives = 128/249 (51%), Gaps = 21/249 (8%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+K + +DDEPLA L+ ++ + + +++ +NA+E + D++F+DI MP + Sbjct: 1 MLKCIAIDDEPLALRQLQGYIAKINFLKLEKAFTNAIEAQQYLAGNPIDLIFVDINMPDL 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLAR------ 114 SG+E V L RP I+F TA+ EYA++ F+ A DYLLKP A +++ + Sbjct: 61 SGVEFVRSL--VSRPMIIFTTAYSEYAVEGFKLDAIDYLLKPFSFADFNRSVTKAQSLYE 118 Query: 115 -LRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSH-EGKE 172 L +++ DV + ++I + L+++ D+ ++ S G YV H + + Sbjct: 119 LLAYRKTQGDVPAPEATPRDREYISIKADYKTTLVRISDIVYLES--EGEYVRLHLDDRS 176 Query: 173 GFTEL-TLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRR 228 T L L+ +E+ P +R HR Y+VN LQ IR G+ + + + VP+ Sbjct: 177 TITTLFRLKNMEAALPSEMFMRVHRSYIVN---LQRIRSYVKGR--VFISDSEYVPIGEN 231 Query: 229 YLKSLKEAI 237 Y ++ + I Sbjct: 232 YREAFQRYI 240 >UniRef50_A1ZK58 Two-component system response regulator protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZK58_9SPHI Length = 245 Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 70/218 (32%), Positives = 111/218 (50%), Gaps = 18/218 (8%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 + K +I+DDEPLARE L ++Q+ +++ +A+E +H D++FLDI+MPR+ Sbjct: 2 LYKCIIIDDEPLARELLEGYVQQVPFLQLEQVFPSAIEASLTIHSQTIDLIFLDIEMPRL 61 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SGL+ + L + P I+F TA+ EYA+ AF + DYLLKPI+ R + + ++ +S Sbjct: 62 SGLDFLRNL--KQPPAIIFTTAYAEYALNAFNLNVVDYLLKPIEFNRFFQAVNKVI--KS 117 Query: 121 KQDVSLLPENQQAL--------KFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 PE QA + +I + +D+ F+ YV H E Sbjct: 118 VPQTITPPEPHQATLETTKEDEAYFFIKTDQKIVKVLTQDILFIEGLQK--YVKIHLPNE 175 Query: 173 GFTELT-LRTLESRTP---LLRCHRQYLVNLAHLQEIR 206 LT L L + P R HR Y++N+AH+ I+ Sbjct: 176 ILISLTSLSHLLEKLPSDSFTRIHRSYIINIAHIDSIQ 213 >UniRef50_D2QI00 Two component transcriptional regulator, LytTR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QI00_9SPHI Length = 235 Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 74/245 (30%), Positives = 125/245 (51%), Gaps = 28/245 (11%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ L++DDE A L+ ++++ + +VG C +A+E I +H+ D+LFLDI MP+++ Sbjct: 5 LRCLLIDDEAAAHYVLQHYIEQVDRLTLVGNCYHALEAINFLHRQPIDLLFLDINMPQMN 64 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL+M+ L H P ++ TA E+A++++ + DYLLKPI+ AR K + ++ +S Sbjct: 65 GLQMLETL--THPPRVILTTAHSEFALESYNYNVVDYLLKPIEFARFLKAVDKVVVTQSD 122 Query: 122 QDVSLLPENQQALKFIPCTGHSRI-------YLLQMKDVAFVSSRMSGVYVTSHEGKEGF 174 E Q L + G S + L D+ +V S G YV + + Sbjct: 123 -------EETQPLSLLTPAGASFVIKVDGDWVRLAYSDLLYVQSW--GNYVKLFTTNQIY 173 Query: 175 -TELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYL 230 T LT+ LE R P +R H+ YLV L ++ RL N + + ++P+ Y Sbjct: 174 VTALTMTELEQRLPAEQFIRIHKSYLVALHSIK--RLSGNE----VFISETSLPIGSTYR 227 Query: 231 KSLKE 235 + L E Sbjct: 228 RELVE 232 >UniRef50_A8UH71 Response regulator n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UH71_9FLAO Length = 245 Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 72/241 (29%), Positives = 123/241 (51%), Gaps = 19/241 (7%) Query: 1 MIKVLIVDDEPLARENLRVFLQE--QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMP 58 MIK ++VDDE R+N++ L + + DI+IVGE + + P++LFLDI + Sbjct: 1 MIKAILVDDEAYIRDNIKAKLLQYFEEDIQIVGEADGVESAVKLIQDENPNLLFLDIHLQ 60 Query: 59 RISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE 118 +G +++ + ++ I+F+T FD +AIKA + A DY+LKPID + + + + Sbjct: 61 DGTGFDILNRISDKNFD-IIFITGFDNHAIKAIKVGALDYILKPIDNNEFRQAVIK-AID 118 Query: 119 RSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFV------SSRMSGVYVTSHEGKE 172 SKQ++ + + + ++ RI L + +V V + G Y T + K Sbjct: 119 GSKQELDIEKFVEISSEYFQGVQKKRIVLKTLDNVYVVYEDDILYCKSEGNYTTFYTQKS 178 Query: 173 G---FTELTLRTLE--SRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSR 227 ++ + LE S +RCH+ YLVN H+ +R N Q L++ + + VPVS Sbjct: 179 EKILISKPMKKALELLSDDIFIRCHQSYLVNKKHV--VRY--NKQGVLVMNSEVKVPVSS 234 Query: 228 R 228 R Sbjct: 235 R 235 >UniRef50_C7PII0 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PII0_CHIPD Length = 251 Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 75/245 (30%), Positives = 123/245 (50%), Gaps = 26/245 (10%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSD-IEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 ++ +IVDDE L+R L++ L++ + IV C++ + + A+ K +PD+LFLDI+MP + Sbjct: 1 MRTIIVDDEKLSRSVLKLLLEKHCPAVNIVAVCADGISALEAIEKYQPDLLFLDIEMPGL 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARL----EKTLARLR 116 +G E++ + I+ T++D YA+ A +A DYLLKPI L +K +AR + Sbjct: 61 NGFEVLKAC-KDASFSIIVTTSYDHYALDAIRHNALDYLLKPIIRDDLTDAVDKAMARHQ 119 Query: 117 QE---RSKQDVSLLPENQQALK-----FIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSH 168 Q+ SK D S+L Q L +P RI L +KD+ + + G H Sbjct: 120 QKAQPESKSDTSILEVLHQHLYPGERLALPSPEGLRILL--VKDILYCVA--DGETTLVH 175 Query: 169 EGKEGFTELTLRTLE------SRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT 222 L R+L+ R H Y++NL ++ D G ++I+ +G Sbjct: 176 LVNTTAPSLVCRSLKEVEGQLKNKGFFRVHHSYVINLNYMDRYIKGDGG--DIIMSDGSC 233 Query: 223 VPVSR 227 +PVSR Sbjct: 234 IPVSR 238 >UniRef50_C6W252 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W252_DYAFD Length = 245 Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 74/247 (29%), Positives = 119/247 (48%), Gaps = 37/247 (14%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I LIVDDE LAR L ++ + ++ +VG C++A+E G + K R D+L LDIQMP ++ Sbjct: 3 INCLIVDDELLARRLLTDYVGKMPELNLVGTCASAMEAQGYLQKQRIDLLLLDIQMPDVT 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARL------------- 108 G+ ++ L ++P + TA+ EYA++ +E DYLLKPI R Sbjct: 63 GISLLRSL--PNKPVTILTTAYAEYALQGYELFVLDYLLKPISFERFFQAASRAVEYIGL 120 Query: 109 --EKTLARLRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT 166 +K L R + R DV P + +I +I+ + +D+ + + G Y+ Sbjct: 121 LGKKALPRYEEARPPHDV---PHD-----YIFVKSDYKIHKIAHRDMDVIEA--YGEYIL 170 Query: 167 SHEGKEGFTEL-TLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT 222 + G + L + LE P +R HR ++VN + + I Q I G Sbjct: 171 IYSGGQKIMTLGQMGKLEQMLPKPGFVRVHRSFIVNFSKIDAI------QGGTIHVGGRE 224 Query: 223 VPVSRRY 229 VP+S+ Y Sbjct: 225 VPLSKGY 231 >UniRef50_C6W1D7 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W1D7_DYAFD Length = 243 Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 68/235 (28%), Positives = 129/235 (54%), Gaps = 18/235 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ ++DDEPLA E ++ ++ D+E+VG C++ +G+ + +L+ DV+FLDIQMPR++ Sbjct: 3 IRCFVLDDEPLATELMQDYIGRLPDLELVGVCNSPTQGLQMLQQLQADVVFLDIQMPRLT 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G +++ L +RP ++F TAF EYA++++E D+L+KPI R +++ ++ R Sbjct: 63 GFDLLRPLG--YRPKVIFTTAFREYALESYEFDVLDFLVKPISFERFLQSVGKIY--RFS 118 Query: 122 QDVSLLPENQQALKFIPCTGHSRI----YLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL 177 + + PE Q + + + ++ L + D+ ++ S V + + G + L Sbjct: 119 PNPAAQPEVPQNIAPVREYQYFKVDKEMVKLYLDDILWIESLKDYVRLHTRSGP-LVSYL 177 Query: 178 TLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRY 229 + LE + P +R H+ ++++L H+Q I A I N +P+ R Y Sbjct: 178 RISYLEEKLPPDRFIRIHKSFIISLDHIQAI------SANYIRINQEEIPIGRIY 226 >UniRef50_C5C1Z4 Two component transcriptional regulator, LytTR family n=18 Tax=Actinomycetales RepID=C5C1Z4_BEUC1 Length = 319 Score = 99.8 bits (247), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 85/245 (34%), Positives = 131/245 (53%), Gaps = 21/245 (8%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRP---DVLFLDIQM 57 M+ VL VDDEP A L L+ E+VG A +G A+ L DV LDI+ Sbjct: 57 MLTVLAVDDEPPALRELAYLLEAD---ELVGRVLTASDGAAALRLLETQDVDVAVLDIRT 113 Query: 58 PRISGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR 116 P +SGL++ +L H P IVF+TA+DE+A+ AF+ A DY++KP R E+ A +R Sbjct: 114 PVLSGLDLARVLARFAHPPAIVFVTAYDEHAVDAFDVRAVDYVMKPY---RPERLAAAVR 170 Query: 117 QERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGK-EGFT 175 + + V + + + + G +R ++ DV FVS+ G Y H + E Sbjct: 171 RAAAAGAVVEQEADGETIA-VELAGVTR--FVRRGDVLFVSAH--GDYARLHTPQGEHLV 225 Query: 176 ELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKS 232 + L TL R +R HR +LV LAH++E+ D+G +++ G T+PVSRR+ + Sbjct: 226 RIPLSTLAERWVDAGFVRIHRSHLVQLAHVRELH-SDSGHWSVVV-AGQTLPVSRRHARD 283 Query: 233 LKEAI 237 L+E++ Sbjct: 284 LRESL 288 >UniRef50_B0SFX2 Response regulator n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SFX2_LEPBA Length = 245 Score = 99.4 bits (246), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 71/244 (29%), Positives = 133/244 (54%), Gaps = 14/244 (5%) Query: 4 VLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGL 63 VLI++DE AR + ++ ++++ G + + +++ + D++F+DI +P ++G+ Sbjct: 8 VLIIEDEYPARMLMMDYVLNCPELKLAGIAESGDKANTLINEKKFDLVFMDINLPVVNGM 67 Query: 64 EMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLA---RLRQERS 120 +++ + + + TA+ E+A++AF+ A DYLLKP R K++ R QE S Sbjct: 68 DILRS-NHSKSTFFIITTAYSEHAVEAFDLDATDYLLKPFSFERFRKSVEKALRFLQE-S 125 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 KQ+ S N+ LK S ++LL D+ F+S+ + + + K+ T L+ Sbjct: 126 KQNNSNENLNKIHLK---IQSDSAVFLLPYPDIQFISANNKSCVIHTTQ-KDYETPKLLK 181 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN--GLTVPVSRRYLKSLKE 235 +E + P +R H+ +LVNL+++ +R + G + L+N T+PV R Y +SLKE Sbjct: 182 EIEEKLPTNQFVRIHKGFLVNLSYVASLRYDKGGSYTIQLKNEDETTLPVGRSYAQSLKE 241 Query: 236 AIGL 239 A+ L Sbjct: 242 ALKL 245 >UniRef50_B2A4G7 Two component transcriptional regulator, LytTR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A4G7_NATTJ Length = 240 Score = 99.4 bits (246), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 63/211 (29%), Positives = 111/211 (52%), Gaps = 13/211 (6%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI VLI DD+ + L+ ++E +++ + N E + AV D+ F+DI MP++ Sbjct: 4 MINVLICDDDLYTSKVLKKVIEENDEVKEIYLAENGEEAVDAVKNNDIDLAFMDIDMPKL 63 Query: 61 SGLEMVGM---LDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ 117 GLE M LD + + +VF+TAF EYA +++ A DY+LKPID R+ + + RL Q Sbjct: 64 DGLEAAKMMISLDSDLK--VVFITAFPEYACDSYDLRALDYILKPIDFHRVNENIERLIQ 121 Query: 118 ERSKQDV-SLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTE 176 + + L EN + Y ++M+D+ ++ + + + + + KE T Sbjct: 122 QSHGEKFHDSLKENN----ILMIKDKQEYYFIKMEDINYIEKQDKQLIIHTKD-KEYSTR 176 Query: 177 LTLRTLESR--TPLLRCHRQYLVNLAHLQEI 205 + L +E + R H+ Y+VNL ++++I Sbjct: 177 MGLNEIEEKLNQNFFRAHKSYIVNLKNIEKI 207 >UniRef50_D0ZEJ7 Two-component system response-regulator n=3 Tax=Bacteria RepID=D0ZEJ7_EDWTE Length = 245 Score = 99.4 bits (246), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 74/247 (29%), Positives = 124/247 (50%), Gaps = 10/247 (4%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+ +IV+DE LARE L + S I + + + +E + R D +FLDIQ+P I Sbjct: 1 MLTAIIVEDEYLAREELAYLIGRHSQIRVQAQFEDGLEAFKYLQSHRVDAVFLDIQIPSI 60 Query: 61 SGL----EMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR 116 G+ ++G E P +VF+TA E+A +AFE F+Y+LKP +EAR+ + L +L Sbjct: 61 DGMMLARNLLGQQRGEGGPAVVFVTAHKEFAAEAFELEVFNYILKPYNEARIVQVLQQLE 120 Query: 117 QERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTE 176 Q+ + + N A + T RI + + + + + YV + + + + Sbjct: 121 QQARRPAPGSVEVNAPAAT-VNLTKGERIIVTPCEQIYYAEADEKLTYVYTRDDRVVLS- 178 Query: 177 LTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKS 232 ++L SR P RCHR Y VN+ ++EI N + L + +PVSR +K+ Sbjct: 179 MSLSEFISRLPTERFFRCHRSYCVNIDKIREIVPWFNSTYLIHLHDLDAEIPVSRSNIKA 238 Query: 233 LKEAIGL 239 ++ + L Sbjct: 239 FRQLMRL 245 >UniRef50_D0HCT2 Response regulator n=5 Tax=Vibrio RepID=D0HCT2_VIBMI Length = 261 Score = 99.4 bits (246), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 70/248 (28%), Positives = 128/248 (51%), Gaps = 23/248 (9%) Query: 2 IKVLIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 +K +I DDEPL R +L L + +E+V N + A+ +PD++FLDI+MP++ Sbjct: 6 VKAVIADDEPLLRHHLNKMLADLWPALEVVASAENGEVALQAIEHHQPDLVFLDIRMPKL 65 Query: 61 SGLEMVG-MLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 G+ + +L P +VF+TA+DEYA+ AFE +A DYLLKP+ +RL +L+Q+ Sbjct: 66 DGMAVARRLLTLPKIPLVVFITAYDEYAVSAFEANAIDYLLKPLSLSRLASCCEKLQQQL 125 Query: 120 SKQD------VSLLPENQQALK--------FIPCTGHSRIYLLQMKDVAFVSSRMSGVYV 165 + LL + +Q + ++ + I+LL + DV +V + + + Sbjct: 126 QRNASPTADLTQLLSQFEQLTRSTKPQYQVWLKASKGEEIHLLAVSDVLYVKAEDKYLSL 185 Query: 166 TSHEG---KEGFTELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN 219 +G +E +L+ L ++ + HR VN+A + ++ + G+ + + + Sbjct: 186 YKTQGSVTQEYLLRSSLKELLAQLDPNQFWQIHRAVAVNVAKIDKVTRDLTGRMWVHI-D 244 Query: 220 GLTVPVSR 227 + +PVSR Sbjct: 245 RVQLPVSR 252 >UniRef50_C0INH2 Two-component system response regulator protein n=1 Tax=uncultured bacterium BLR12 RepID=C0INH2_9BACT Length = 230 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 113/215 (52%), Gaps = 24/215 (11%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MIK +IV+DE LA+ ++ +Q+ E+VG CSNA+E + K D++FLDIQ+P + Sbjct: 1 MIKCIIVEDEVLAQHVIQSHVQQTGKFELVGTCSNALEAKEVLDKKEVDLIFLDIQLPGM 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL----- 115 SGL + L P +V TA+ EYA++++E + DYLLKPI R K + ++ Sbjct: 61 SGLNFLRTLATP--PLVVLTTAYPEYALESYEFNVIDYLLKPISFERFSKAVNKIVDGRL 118 Query: 116 --RQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 ++E +Q + ++ KF IY+ MKD ++ + + +H+ Sbjct: 119 FTQKESIEQAGHIFIKSNN--KFFKVNFSEIIYIEGMKD--YLKIYTAEYRLVTHQ---- 170 Query: 174 FTELTLRTLESRTP---LLRCHRQYLVNLAHLQEI 205 T+ +E P +R H+ Y+V LA+++ + Sbjct: 171 ----TMSEMEKILPSKQFMRVHKSYIVALAYVRSV 201 >UniRef50_C6XUE8 LytTr DNA-binding region n=2 Tax=Pedobacter RepID=C6XUE8_PEDHD Length = 259 Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 78/256 (30%), Positives = 132/256 (51%), Gaps = 22/256 (8%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQ-SDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 M+ +IVDDE AR +L LQE ++ I G + E + + D++FLDI MP Sbjct: 1 MLNTIIVDDEEFARSSLYFLLQENCGEVHISGIAKSVAEARNLLTQHAVDLIFLDIAMPG 60 Query: 60 ISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLAR----- 114 +G E++ + +I+F TA+D+YA+KA + +A DYLLKPID L+ +A+ Sbjct: 61 ENGFELIPYAQS-NNAHIIFTTAYDQYALKAIKANALDYLLKPIDIDELKIAVAKAVRFI 119 Query: 115 -LRQERSKQDVSL------LPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMS-GVYVT 166 L ++ + ++ SL L E + K G L+ + D+ +++ + V+ Sbjct: 120 ALNKKENNRNESLQSLAVNLAERNEIRKISLPNGQG-YSLVNIDDIIHIAADSNYSVFYF 178 Query: 167 SHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTV 223 +++ K +++ L+ E P +R H+ +VNL +L+E NG E+IL+NG + Sbjct: 179 ANKDKITVSKV-LKEYEEILPDHQFVRIHKSSIVNLNYLKEYN-SKNG-LEVILKNGEKI 235 Query: 224 PVSRRYLKSLKEAIGL 239 VSRR E + L Sbjct: 236 AVSRRRASEFVEKVKL 251 >UniRef50_Q8A855 Two-component system response regulator n=1 Tax=Bacteroides thetaiotaomicron RepID=Q8A855_BACTN Length = 228 Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 64/237 (27%), Positives = 122/237 (51%), Gaps = 18/237 (7%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI +IV+D PLA + L+ F+ + +++ G N ++ + D+LFLDIQM + Sbjct: 1 MINCIIVEDAPLAVDKLKNFISKVPLLDLAGTFDNGLDAFDFLQSNTIDLLFLDIQMEQF 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE-R 119 +GL+++ L RP+I+ ++A+ EYA++ FE DYLLKP R K + +++ E Sbjct: 61 TGLQLLQAL--HTRPHIIIVSAYGEYAVQGFEYDVTDYLLKPYSFERFLKAVNKVQTEMA 118 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 S LP++ LK R+ + + D+ ++ + + ++V + + T L+ Sbjct: 119 SNPPAQPLPKDYIFLK-----TEYRMVRINLCDILYIEGKGAYLHVIT-DTTRIMTLLSF 172 Query: 180 RTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSL 233 + +ES P +R H+ YL+ + + DN + ++ + +P+ + YLK Sbjct: 173 KEIESLLPAKQFIRIHKSYLIAINKI------DNIERNVVKIANMRIPIGKSYLKDF 223 >UniRef50_Q2BAT6 Two-component response regulator n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BAT6_9BACI Length = 160 Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 48/117 (41%), Positives = 78/117 (66%), Gaps = 1/117 (0%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I +LI DDEP +R+ L L E D++++GE + + + +L+PD +FLDI+MP+++ Sbjct: 5 ISILIADDEPYSRQELVHLLNEYGDLQVIGEAESGEQAVIQCLQLQPDAVFLDIEMPKMN 64 Query: 62 GLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ 117 G+E L D + P I+F TA+ ++A +AF A DYLLKP DE +++T++RLR+ Sbjct: 65 GMEAARSLNDLKKVPKIIFATAYPQFAAEAFRYEAVDYLLKPFDEELVKETVSRLRK 121 >UniRef50_A7T6N4 Predicted protein n=4 Tax=cellular organisms RepID=A7T6N4_NEMVE Length = 237 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 67/231 (29%), Positives = 118/231 (51%), Gaps = 18/231 (7%) Query: 5 LIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGLE 64 +IVDDEP+AR+ L F+++ +++V C NA+E ++ + D+ FLDI MP ISGL Sbjct: 8 IIVDDEPIARDILISFIEKIPSLQLVKSCKNAMEAFEVINTEKVDLFFLDIHMPEISGLS 67 Query: 65 MVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSKQDV 124 + ++ + ++F TA+ YA++ F A DYLLKPI R + + + E +K + Sbjct: 68 LAKIVPKSAK--VIFTTAYRGYAVEGFNLKAVDYLLKPIAFERFLEAVNKFF-ETNKSNT 124 Query: 125 SLLPE--NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSH-EGKEGFTELTLRT 181 +L + N+Q F ++ + ++ F+ S G Y+ + + K T T+ Sbjct: 125 PVLEQIKNEQT-NFFFVRSDRKMVRVNFAEILFIES--VGDYIKIYLKEKIIVTRETITN 181 Query: 182 LE---SRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRY 229 +E S +R HR ++ L R ++ E + N +P+SR+Y Sbjct: 182 IEAKLSHIDFIRTHRSFIAGL------RFIESYTNEFVEINKKAIPISRKY 226 >UniRef50_C6XX74 LytTr DNA-binding region n=5 Tax=Bacteroidetes RepID=C6XX74_PEDHD Length = 231 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 66/233 (28%), Positives = 125/233 (53%), Gaps = 16/233 (6%) Query: 5 LIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGLE 64 LIVDD +A L+ + + + +VGEC +AVE + D+LFLDI+MP +SG+E Sbjct: 4 LIVDDNIIALAVLKKLISMEPTLTVVGECFDAVEAYKQIQTKEVDILFLDIEMPDMSGIE 63 Query: 65 MVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSKQDV 124 +V L + RP ++F T+ YA +AF+ + D+L+KP+ AR + + + ++ + + Sbjct: 64 LVKSL-GDKRPMVIFTTSTIGYAAEAFDLNVVDFLIKPVSPARFLQAVEKAKRVLLTKGL 122 Query: 125 SLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFT-ELTLRTLE 183 S+ + + F+ + + +++ D+ ++ +R G YV + ++ +L+++E Sbjct: 123 SVADKEDE---FVFIRDSNVVRRVKVSDILYMEAR--GDYVRINLTDHTYSIHSSLKSVE 177 Query: 184 ---SRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSL 233 S+ LR HR +++N+ + I G ++ RN VPVS Y +L Sbjct: 178 EKLSKNMFLRVHRSFIINVGKIDTIE----GGTLIVHRN--MVPVSDAYRATL 224 >UniRef50_A1ZI08 Two-component system response regulator n=3 Tax=Bacteroidetes RepID=A1ZI08_9SPHI Length = 258 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 56/222 (25%), Positives = 116/222 (52%), Gaps = 22/222 (9%) Query: 5 LIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGLE 64 +IVDDEPLARE +++ +QE ++++G NA++ + K D++FLDIQMP ++GL+ Sbjct: 4 IIVDDEPLAREGMKLNIQELPSLQLIGSFENAMQANDFLSKNEVDLMFLDIQMPEVTGLD 63 Query: 65 MVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLA------RLRQE 118 + L+ + P+++ TA+ ++A++ + DYL+KPI R K + +LR++ Sbjct: 64 FLKTLNLKKPPFVILTTAYPQFALEGYALDVIDYLVKPISMDRFIKAVNKVDYYYKLREQ 123 Query: 119 RS------------KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT 166 S D + +N +I + + +++ +V V V Sbjct: 124 ASTDTTPAAANTDKTSDSPVGSDNADIEDYIFIRADRKYMKVFFREINYVEGLKDYVIVY 183 Query: 167 SHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEI 205 + + ++ T + ++T+E + P +R + Y++N+ H++ + Sbjct: 184 T-DTQKIVTAMNIKTIEGQLPSNLFIRVSKSYIINMQHIKAV 224 >UniRef50_C4ZNN1 Two component transcriptional regulator, LytTR family n=5 Tax=Betaproteobacteria RepID=C4ZNN1_THASP Length = 264 Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 134/256 (52%), Gaps = 21/256 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQE---QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMP 58 ++VL+VDDE AR LR L + Q IVG +N VE + + DV+ DI+MP Sbjct: 12 LRVLVVDDEAPARARLRDLLGDVAGQQPNAIVGMAANGVEALRLLDAAAADVVLADIRMP 71 Query: 59 RISGLEMVGMLD--PEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR 116 + G+E+ L P P +VF+TA+D+YA++AFE A DYLLKP+ RL L R+R Sbjct: 72 VMDGVELARHLARLPAP-PALVFVTAYDQYAVQAFELAAVDYLLKPVRAQRLAAALERVR 130 Query: 117 QERSKQDVSLLPE-NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSH-EGKEGF 174 R+ +L +A + RI L+ + +V ++ + + YVT+ +E Sbjct: 131 ARRAPPAADVLATLATRARRHFSVAECGRILLVPVAEVRYLRAELK--YVTARTAAREYV 188 Query: 175 TELTLRTLESRTP--LLRCHRQYLVNLAHLQ--EIRLEDNGQA------ELILRN-GLTV 223 + +L +E P LR HR LV A + E E +GQ E++LR+ + Sbjct: 189 LDESLVQIEQEFPRSFLRLHRNCLVAFAAVAGVERAAERDGQKEAEPRWEVLLRDLPERL 248 Query: 224 PVSRRYLKSLKEAIGL 239 PVSRR ++++A+GL Sbjct: 249 PVSRRQWPAVRQALGL 264 >UniRef50_Q3BTS0 Two-component system regulatory protein n=2 Tax=Xanthomonas RepID=Q3BTS0_XANC5 Length = 240 Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 74/244 (30%), Positives = 119/244 (48%), Gaps = 15/244 (6%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 +I+ +IV+D LAR L L+ + ++G + + + PDV+FLDI +P Sbjct: 7 VIEAVIVEDSELARFELEHQLKGYPQLRVLGHADDVDSAVQLIESATPDVVFLDIDLPGG 66 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 + +++ L P I+F TAFD +A+KAF + DYLLKPI+ RL + + +L Sbjct: 67 NAFDVLERL--SRVPRIIFTTAFDAHALKAFGYNTVDYLLKPIEPQRLAQAIEKL----- 119 Query: 121 KQDVSLLPENQQALK---FIPCTGHSRIYLLQMKDVAFVSS--RMSGVYVTSHEGKEGFT 175 D P ++A+ FI H +L++ +DV + + S VY +H Sbjct: 120 -GDAVAAPPVRRAMDSAIFIKDGEHC--FLVKPRDVRLIEAVGNYSRVYFQNHAPLLYRP 176 Query: 176 ELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKE 235 + T + R R+Y+VNL ++++ NG L LR GL V VSRR +E Sbjct: 177 LGAIETQLAPDKFFRASRKYIVNLDFVEQVAPWSNGGLMLTLRGGLEVEVSRRQSARFRE 236 Query: 236 AIGL 239 + L Sbjct: 237 LLSL 240 >UniRef50_A3P4Z8 Response regulator protein, frameshift n=9 Tax=pseudomallei group RepID=A3P4Z8_BURP0 Length = 300 Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 53/122 (43%), Positives = 77/122 (63%), Gaps = 12/122 (9%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQ-----SDIEIVGECSNAVEGIGAVHKLRPDVLFLDI 55 M LI DDEP NL L E+ ++EIV N V+ + A++ RPD+ FLDI Sbjct: 1 MPTALIADDEP----NLSAELAERLAELWPELEIVATPRNGVDTLAALNAARPDIAFLDI 56 Query: 56 QMPRISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL 115 +MP I GL++ ++ H +VF+TA+DEYAI+AFE A DYLLKP+ + RL + +A+L Sbjct: 57 RMPGIDGLKLASLVPDVH---VVFVTAYDEYAIEAFERSAIDYLLKPVTDERLLRCIAKL 113 Query: 116 RQ 117 ++ Sbjct: 114 QR 115 >UniRef50_A3HT26 Two-component system response regulator n=1 Tax=Algoriphagus sp. PR1 RepID=A3HT26_9SPHI Length = 225 Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 74/238 (31%), Positives = 123/238 (51%), Gaps = 20/238 (8%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MIK + +DDE +A E ++ + + + +A++ + V + D++FLDI MP I Sbjct: 1 MIKAIAIDDEKMALEVIKAHASKVPFLHLDEVFLDAIQALEYVKEQSVDLIFLDINMPDI 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SG++ G+L E +VF TA+ ++A+K FE A DYLLKP + +R K +++ Sbjct: 61 SGIDFAGLLPKE--TMVVFTTAYSDFAVKGFELDALDYLLKPFNLSRFIKAC-----QKA 113 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG-FTELTL 179 ++ + L PE + FI TG ++ L ++ F + SG YVT +E + +TL Sbjct: 114 QEWMELQPEREPESTFIK-TGEGQVR-LHFGELLFCEA--SGNYVTFQSEEEKVLSRMTL 169 Query: 180 RTLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKE 235 +E+ P +R HR +LVN + D + L+ TVPVS Y+ + E Sbjct: 170 AEVENLLPSYFIRTHRSFLVNSKKV------DKVEKHLLHLQQKTVPVSLSYMDQVME 221 >UniRef50_A4A9F6 Two-component system regulatory protein n=2 Tax=unclassified Gammaproteobacteria RepID=A4A9F6_9GAMM Length = 245 Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 82/245 (33%), Positives = 121/245 (49%), Gaps = 11/245 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K+L+VDDEPLAR+ L LQ E N + V +P ++ LDI+MP + Sbjct: 1 MKILVVDDEPLARQRLLRLLQRLRPEARCFEADNGRSALTLVRAEQPQIVLLDIRMPEMD 60 Query: 62 GLEMVG-MLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTL-ARLRQER 119 G+E+ G +LD P ++F TA+DEYA+ A + HA YLLKP+ E LE L A +R R Sbjct: 61 GVEVAGHLLDEPAAPAVIFCTAYDEYALAALQHHAIAYLLKPVREKELEGALKAAVRVNR 120 Query: 120 SKQD----VSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFT 175 ++ D + + GH I L + DV + V + G + Sbjct: 121 AQLDSLGFSGAGAGAGAGREEVVSAGHRGIETLPVADVRCFLAEDKYVRACAPSGDILLS 180 Query: 176 ELTLRTLES--RTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVP-VSRRYLKS 232 E +L+ LE LR HR LV AH+ + D+G + L++ P VSRR+L Sbjct: 181 E-SLKELEQEFEARFLRVHRNALVARAHISRLLRSDDGWV-VELKDVSPRPQVSRRHLSE 238 Query: 233 LKEAI 237 +K A+ Sbjct: 239 IKAAL 243 >UniRef50_B1ZNG8 Two component transcriptional regulator, LytTR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZNG8_OPITP Length = 249 Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 49/104 (47%), Positives = 70/104 (67%), Gaps = 2/104 (1%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSD-IEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 M++ LIVDDEP AR+ LR L +D +EIVGE + + +LRPD++FLDIQMPR Sbjct: 1 MLRALIVDDEPPARDLLRRLLAVHADHVEIVGEARSVADAAEKYQRLRPDLVFLDIQMPR 60 Query: 60 ISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPI 103 G ++ L P ++F+TA+D +A++AFE +A DYLLKP+ Sbjct: 61 EDGFALLPRLGAPA-PAVIFVTAYDAFAVRAFEVNAVDYLLKPV 103 >UniRef50_A6EI22 Response regulator n=1 Tax=Pedobacter sp. BAL39 RepID=A6EI22_9SPHI Length = 249 Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/241 (29%), Positives = 124/241 (51%), Gaps = 19/241 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQS-DIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 IK +IVDDEP +R NLR L E D+E++ E +A + + +PD+LFLDI+M I Sbjct: 3 IKSIIVDDEPKSRSNLRQLLTEYCPDVEVIAEAGSATSALVMIAAHQPDLLFLDIEMGEI 62 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLAR-LRQER 119 SG +++ +L + R ++F+TAFD+Y I+A + A DYLLKPI+ L + + ++Q Sbjct: 63 SGFDLLKLLHGKQRFELIFVTAFDKYGIQAVKACAIDYLLKPINIIELSTAVDKAIKQIG 122 Query: 120 SKQDVSLLPE---------NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEG 170 K++ L E ++Q + +P +I + + + + + + + + Sbjct: 123 PKKENLRLKELVANIDRRIDEQKIA-VPLA--DKIEFIAVSRIIRLEAEGNYTHFYLDDR 179 Query: 171 KEGFTELTLRTLE---SRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSR 227 K TL+ + R +R H+ +L+N + D G + + +G VP+SR Sbjct: 180 KHLLICKTLKDYQELLERHHFIRTHQSHLINFHRISAYVKTDGGY--IAMEDGSQVPISR 237 Query: 228 R 228 + Sbjct: 238 Q 238 >UniRef50_A0YAJ1 Response regulator n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YAJ1_9GAMM Length = 247 Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 55/135 (40%), Positives = 80/135 (59%), Gaps = 3/135 (2%) Query: 2 IKVLIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 + ++VDDE + L + L E ++ IVG +N I + PD+ FLDI MP + Sbjct: 3 VTAIVVDDESTLVDYLVIKLGELWPELVIVGTANNGRSAIALAEEFDPDIAFLDIHMPGL 62 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SGL++ L + IVF+TA+DE+A+KAF+ A DYLLKP+ ARL T+ RL+ S Sbjct: 63 SGLQVAEALPANTK--IVFVTAYDEFAVKAFQHAAVDYLLKPVTNARLGLTIERLKNSPS 120 Query: 121 KQDVSLLPENQQALK 135 QD S+L + QA + Sbjct: 121 HQDRSVLMQFLQAAR 135 >UniRef50_A0LTS8 Response regulator receiver protein n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LTS8_ACIC1 Length = 249 Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 78/238 (32%), Positives = 120/238 (50%), Gaps = 10/238 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + VL VDDEP A + L L++ + + +A E + + DV+FLD+ MP + Sbjct: 5 LSVLAVDDEPPALDELVYSLRQCPAVGTIYAAHDAAEALRCLEHDDVDVVFLDVVMPGLD 64 Query: 62 GLEMVGMLDPEHR-PYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GLE+ G+L+ R P +VF+TA ++YA+ AF A DY+LKP D RL LAR+ S Sbjct: 65 GLELAGVLNRFARAPAVVFVTAHEKYAVAAFGVQAVDYVLKPFDVHRLSAALARVTGRTS 124 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + ++ + + R L+ +V +V + V V +H+G + L Sbjct: 125 TANR----DSGEQFATLAADLPGRTVLIDRSEVEWVEAAGDYVRVHTHDGHSYLVRVPLA 180 Query: 181 TLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKE 235 L R R HR +LV L ++EI D GQ +L G +PVSRR+L+ +E Sbjct: 181 VLAERWEPHGFARIHRSHLVALRAVREIATRD-GQTS-VLVGGHHLPVSRRHLRDFRE 236 >UniRef50_A9DIK2 Response regulator n=3 Tax=Bacteroidetes RepID=A9DIK2_9FLAO Length = 261 Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 73/239 (30%), Positives = 122/239 (51%), Gaps = 15/239 (6%) Query: 1 MIKVLIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 M+ +IVDD P A + L+ ++ ++ I+G S+ VE + K +PD+LFLDI + Sbjct: 12 MLTTVIVDDIPAALQMLKEDIERLHPELNIIGTASSVVETAKLLRKQQPDILFLDIMLGD 71 Query: 60 ISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARL----EKTLARL 115 SG +++ + P I+F+TA DE+AI+AF+ A DY+LKP E L EK ++ Sbjct: 72 GSGFDVLEIF-PNLTSKIIFVTASDEFAIRAFKFAAIDYVLKPYSEEELSTAIEKAKGQI 130 Query: 116 RQERSKQDV---SLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 + + D+ +L N++ K I +I ++ M ++ S + +G++ Sbjct: 131 HPNKERLDILKDTLAAPNEKPTK-ISLHTLDKIIIVSMDEIIRCESDSNNTIFYLKDGQK 189 Query: 173 GFTELTLRTLES---RTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRR 228 F TL+ LR H+ +LVNL ++ D G L+L++ TVPVS R Sbjct: 190 IFVTKTLKYFADMLKNYQFLRVHQSHLVNLQFIKAFIKTDGGY--LLLKDKSTVPVSVR 246 >UniRef50_A5F9U3 Two component transcriptional regulator, LytTR family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5F9U3_FLAJ1 Length = 237 Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 64/230 (27%), Positives = 110/230 (47%), Gaps = 17/230 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K L++DDEP+AR + F+ + +E G C++A+E + + + D++FLDI MP ++ Sbjct: 3 MKCLVIDDEPIARNGIVDFISKIDFLEAAGTCASALEATSYLQEKQIDLMFLDINMPYLT 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GLE + LD + P ++F TA+ E+A+ + DYLLKPI R + + RQ Sbjct: 63 GLEFLEALD--NPPLVIFTTAYSEHALDGYRLQVVDYLLKPITFQRFYQASLKARQWHQM 120 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSH-EGKEGFTELTLR 180 P+ Q F+ + D+ ++ + Y H + K T+ Sbjct: 121 MHA---PKQNQLDPFLYVRQEEGFQKISWVDILYIEGMQN--YAKLHFKEKVIVIHQTMI 175 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSR 227 +LE P R H+ +LVN+ H+ D+ + G +P+SR Sbjct: 176 SLEETLPAEIFFRIHKSFLVNITHI------DSVSGGRLFIKGQELPISR 219 >UniRef50_C6CV51 Response regulator receiver and SARP domain protein n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CV51_PAESJ Length = 376 Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 52/124 (41%), Positives = 79/124 (63%), Gaps = 10/124 (8%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M++ ++VDDE L E + L + ++++G C N E +G L+PDVLFLDI+MP + Sbjct: 1 MMRAIVVDDERLVAEQIDRMLV-NAGVKVLGRCVNPHEALGMAKALQPDVLFLDIEMPEL 59 Query: 61 SGLEMV-----GMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL 115 SGLE+ LD E +VF+TA+++YAI AF +A DYLLKP+ E L+++L R+ Sbjct: 60 SGLEIAQQVYADKLDTE----VVFITAYNQYAIDAFRVNALDYLLKPVMEEDLQRSLERI 115 Query: 116 RQER 119 + R Sbjct: 116 EKRR 119 >UniRef50_D2M2I5 Response regulator receiver and SARP domain protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M2I5_BACS4 Length = 363 Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 54/140 (38%), Positives = 91/140 (65%), Gaps = 5/140 (3%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M++V+++DDE LA L ++ IEIVG+ ++ I +++L+PD+LFLDI+MP Sbjct: 1 MVRVVMIDDEILALNLLENLIKTIHGIEIVGKFTSFDAAIADLNELKPDLLFLDIEMPGE 60 Query: 61 SGLEMVG-MLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +G+ M + IVF+TA+D+YA++AF HA DYLLKP+ + +LEK++A++ + R Sbjct: 61 NGIRAAERMTTIDENVDIVFVTAYDQYALEAFGVHAVDYLLKPVTKEKLEKSVAKILKRR 120 Query: 120 SKQDVSLLPENQQALKFIPC 139 ++S P N+Q +F+ Sbjct: 121 ---NIS-APNNEQHDRFLKA 136 >UniRef50_C6VTD2 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VTD2_DYAFD Length = 261 Score = 97.1 bits (240), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 73/260 (28%), Positives = 131/260 (50%), Gaps = 50/260 (19%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ +IVDDE AR + ++Q+ +EI G +A + + + +++PD++FLDI+MP ++ Sbjct: 7 LRCIIVDDEADARRLIEKYVQKVPFLEIAGFAESATDALYLIREMKPDIIFLDIEMPEMT 66 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKP------------IDEARLE 109 G E++ +L P RP ++ +TA YA++ +E DYLLKP +D AR+ Sbjct: 67 GFELLKLL-PAARPAVIMITADPSYALEGYEHELTDYLLKPVSFERFLKAVNKVDNARVP 125 Query: 110 KTL-------------ARLRQERSK-----QDVSLLPENQQALKFIPCTGHSRIYLLQMK 151 K L A+ E+++ D LL EN++ +K P H ++ M+ Sbjct: 126 KYLQATNESVRELGSQAKQSTEQAEAAGFTSDFLLLKENKKLIKVSPGEIH---FIEGMR 182 Query: 152 DV--AFVSSRMSGVYVTSHEGKEGFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLED 209 D + S R++ +++T + +E S + LR +R Y+VN ++EI E Sbjct: 183 DYLKLYWSDRVAVIHMTMSKIEEAL---------SPSQFLRVNRSYIVNKKVIREI--EG 231 Query: 210 NGQAELILRNGLTVPVSRRY 229 N E+ +G +P+ Y Sbjct: 232 N---EITTNSGRKIPIGITY 248 >UniRef50_C7PEI4 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PEI4_CHIPD Length = 250 Score = 97.1 bits (240), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 70/240 (29%), Positives = 121/240 (50%), Gaps = 39/240 (16%) Query: 1 MIKVLIVDDE-PLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKL-RPDVLFLDIQMP 58 M+ +LI++DE P A ++ LQ +IEIVGE I + + PD++ +DI++ Sbjct: 1 MLSILIIEDELPNAARLKKLLLQIDRNIEIVGEIQTVESAISWLKEHEHPDIICMDIKLT 60 Query: 59 RISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE 118 E+ + +++F+TA+ EYA+KAFE + DYLLKP++EA+LEK++AR+ Sbjct: 61 DGLSFEIFDHVTI--TSHVIFITAYHEYALKAFEVNGIDYLLKPLEEAQLEKSIARI--- 115 Query: 119 RSKQDVSLLPENQQALK--------------------FIPCTGHSRIYLLQMKDVAFVSS 158 ++ ++S+ P Q+ ++ FIP H +A+ S Sbjct: 116 KNLVNLSVAPNLQEVIRKMQYKEVAYRTRFLVSYRNMFIPVMVHH---------IAYFFS 166 Query: 159 RMSGVYVTSHEGKEGFTELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAEL 215 VY+ + +G+ + TL LE R RQY+V+ A +++I NG+ +L Sbjct: 167 EHKSVYLVTEQGERYVIDQTLEELEQELNPKEFFRATRQYIVSAASIRKIHQTFNGKLKL 226 >UniRef50_D2QPM9 Two component transcriptional regulator, LytTR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QPM9_9SPHI Length = 254 Score = 97.1 bits (240), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 65/254 (25%), Positives = 123/254 (48%), Gaps = 24/254 (9%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 +++ I+DDE R + ++ + +VG NAV+ + + +++PD++FLD++MP + Sbjct: 3 ILRCYIIDDEAPNRALIEKYIHRLPSLTLVGSQDNAVDALLELPQVQPDLIFLDVEMPEM 62 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEAR----LEKTLARLR 116 +G E + +L P RP ++ +TA+ +YA+ FE DYL+KP+ R + K LA+ Sbjct: 63 TGFEFLRVL-PSPRPTVIMVTAYPQYAVDGFEHDVIDYLVKPVSFERFFRAVNKILAKQA 121 Query: 117 QERSKQDVSLLP------ENQQAL----KFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT 166 DV LP E + F ++ +++ + F+ S + Sbjct: 122 STPGSPDVPALPSLAAPSETPTGVSDKDSFFLVKEDKKLVRVELDQIVFIES-LKDYLKI 180 Query: 167 SHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTV 223 G+ T +TL LE P +R +R Y++ ++EI +G ++ NG+ V Sbjct: 181 YLPGRTILTHMTLTRLEEMLPPDQFVRVNRSYIIRTGSIKEI----DGNT-ILTTNGMKV 235 Query: 224 PVSRRYLKSLKEAI 237 P+ Y + + + I Sbjct: 236 PIGVTYREEVMKKI 249 >UniRef50_A4A4S8 Two-component system, regulatory protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4A4S8_9GAMM Length = 237 Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 66/202 (32%), Positives = 106/202 (52%), Gaps = 11/202 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ LIVDDE L RE + + + +++V C+NA+E + D+LFLDI+MP + Sbjct: 6 VRCLIVDDEHLGRELIEGHVAQLQQLQLVASCANALEAGETLASESVDLLFLDIEMPMLK 65 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLAR-LRQERS 120 G + L H P ++F TA+ EYA++ FE A DYLLKP+ R K + R L R+ Sbjct: 66 GTDFYQGL--RHPPAVIFTTAYREYALEGFELEAIDYLLKPVTFPRFFKAVNRFLNARRA 123 Query: 121 KQDVSLLPEN-QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFT-ELT 178 + LP + F+ C + L + D+ +V Y+ H ++ +T + T Sbjct: 124 RATTDELPRGLARDFVFVRC--DRKDVRLCIADIEYVQGLKD--YIRIHTQRKIYTVKET 179 Query: 179 LRTLESR--TPLLRCHRQYLVN 198 +++ R + L+R HR YLVN Sbjct: 180 MQSFSERAGSELVRVHRSYLVN 201 >UniRef50_A6EH20 Response regulator n=1 Tax=Pedobacter sp. BAL39 RepID=A6EH20_9SPHI Length = 247 Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 68/241 (28%), Positives = 120/241 (49%), Gaps = 19/241 (7%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI +I++DEP R ++ + ++ DI I+G +N + + + +P ++ +DIQ+ Sbjct: 1 MIDTIIIEDEPAVRREIKYLVSQEDDINILGTATNVKDAVALIKATKPQLVLMDIQLVDG 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER- 119 + +++ E I+F+TA++ +AIKA + A DYLLKP+DE L+ L R R E Sbjct: 61 TAFDVLSEF-SEITFRIIFITAYNHFAIKAIKYGALDYLLKPLDEQELQAALQRARTETL 119 Query: 120 --SKQDVSLLPEN-----QQALKFIPCTGHSRIYL--LQMKDVAFVSSRMSGVYVTSHEG 170 S+Q L N Q +L+ H+ YL ++++D+ + S S EG Sbjct: 120 DGSQQQQQLTIANDTKEIQDSLES-HIVLHTMEYLQVVKLRDIIYCQSEGSYTNFFLTEG 178 Query: 171 KEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSR 227 ++ L+ + P LR H+ YLVN+ + + +IL++ +PVS Sbjct: 179 RKILISKPLKFYDEILPDQWFLRAHQSYLVNITCVDKFL----KTGFIILKDKTEIPVSS 234 Query: 228 R 228 R Sbjct: 235 R 235 >UniRef50_Q2N6M0 Two-component response regulator n=7 Tax=Sphingomonadales RepID=Q2N6M0_ERYLH Length = 246 Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 71/245 (28%), Positives = 124/245 (50%), Gaps = 16/245 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ LIVDDEPLA E ++V + + +VG S+ + V L PD++ LD+ MP + Sbjct: 9 LRTLIVDDEPLAVERMQVICAKLPKLNVVGTASDGEAALRLVDALTPDLVLLDMTMPGLD 68 Query: 62 GLEM---VGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE 118 GL + +G LD P ++F+TA D +A++AF+ A DY+LKP+ + RLE+ + R Sbjct: 69 GLAVARKLGRLDAP--PAVIFVTAHDHFAVEAFDLEAIDYVLKPVAQDRLERAIERAIAR 126 Query: 119 RSKQDVSLLPENQ-QALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL 177 R + PE + + L+ + S + ++ V+ + + YV + G + L Sbjct: 127 RGEA----RPEKESEWLQELWVPHRSELIRIETSQVSRIDAERD--YVRLYVGDRTYLLL 180 Query: 178 -TLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSL 233 T+ LE R +R HR ++ ++ +R + G + L +G + + R YL + Sbjct: 181 QTIAGLEERLDPAEFIRIHRSTILRKDGIRGLRHDGLGVWSVELEDGEALRIGRTYLPKV 240 Query: 234 KEAIG 238 K G Sbjct: 241 KAMAG 245 >UniRef50_B0RWJ0 Transcriptional regulator protein n=11 Tax=Proteobacteria RepID=B0RWJ0_XANCB Length = 258 Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 67/229 (29%), Positives = 116/229 (50%), Gaps = 29/229 (12%) Query: 27 IEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGLEMV-GMLDPEHRPYIVFLTAFDE 85 +++V EC + + + +PDV+FLDI+MP ++G+E+ M + R +VF+TA+D+ Sbjct: 30 LQVVAECEDGASALDTIATQQPDVVFLDIRMPGLTGIEVARAMREVSPRTQVVFVTAYDQ 89 Query: 86 YAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS--KQDVSLLPENQQ----------- 132 YAI AFE+ A DYLLKPI+ RL+ T R++Q + + D ++L Q Sbjct: 90 YAIDAFEQGAVDYLLKPINRERLQATWQRVQQRAAAGQPDGAMLESLLQRLAARPAAASA 149 Query: 133 --ALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT-----LESR 185 L ++ + L+ + +VA+ + V + G E LRT L+ Sbjct: 150 PPPLAWLTASSGRETRLIALDEVAYFQADQKYTTVMTAAG-----EAILRTPLRELLDVL 204 Query: 186 TP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLK 231 P + HR +VN+ + + +D+G+ L LR T+ VS+ ++ Sbjct: 205 DPHVFKQIHRSTIVNMKAVASVVRDDSGKGRLALRGRSETLTVSQPFMS 253 >UniRef50_A5FIA9 Two component transcriptional regulator, LytTR family n=3 Tax=Flavobacteriales RepID=A5FIA9_FLAJ1 Length = 237 Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 67/239 (28%), Positives = 113/239 (47%), Gaps = 12/239 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IK LI+DDEPLA ++ +L+ + E+V SN +EG+ + + DV+FLDI MP + Sbjct: 3 IKCLIIDDEPLAINVIKNYLEPLENFEVVNTFSNPIEGLNFLKNNKVDVIFLDINMPVLD 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+ + L E+ P +V +A+ ++AI+ +E DYL+KPI+ RL KTL ++ + Sbjct: 63 GINFIKSL--ENPPLLVITSAYSQFAIETYELDVLDYLVKPIEFPRLMKTLNKISKRLEN 120 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 + S N + R+ + ++ + S + + + GK TL Sbjct: 121 KASSPQESNPDSPFIFVKIDKKRMKKIFFNEILVIESLKDYLKINTTTGK-YIIHSTLSD 179 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 P LR HR Y + + + D + I GL + R Y+ +K+ I Sbjct: 180 FTDLLPEKNFLRIHRSYTIAIDKI------DAVEGNSIEIEGLRYVIGRSYIDHVKQRI 232 >UniRef50_C5PVL6 LytTR family two component transcriptional regulator n=3 Tax=Sphingobacterium spiritivorum RepID=C5PVL6_9SPHI Length = 232 Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 66/241 (27%), Positives = 122/241 (50%), Gaps = 19/241 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I LI+DDEP A L + + S + ++ S+A E I ++ D++F+DIQMP+++ Sbjct: 5 INCLILDDEPFAVNLLADYASKVSQLNVIYAGSDAFEVIEILNSESVDLIFIDIQMPQLT 64 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+E++ M + +H + +A+ EYA+ AF+ + D+LLKPI R +++ + + Sbjct: 65 GIELMQMFNQKHN--FIITSAYSEYALDAFQFNVIDFLLKPITFNRFYQSVEKFNRW--- 119 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL-TLR 180 QD E+ +L H Y +Q +D+ ++ Y+ H E L ++ Sbjct: 120 QDTFQSSESDNSLFVKADRKH---YKIQPEDILYIEGLKD--YIRIHTVSERMVVLENMK 174 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 + R P +R HR Y+V L ++ I +++++ NG +P+ Y K + E + Sbjct: 175 DILDRLPQHQFVRIHRSYIVPLKRIKVIE-----GSQIVMTNGEYLPIGETYRKLIGEWL 229 Query: 238 G 238 G Sbjct: 230 G 230 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AFT7 Uncharacterized response regulatory protein yehT... 346 3e-94 UniRef50_C6CMQ8 Two component transcriptional regulator, LytTR f... 313 2e-84 UniRef50_Q2RYN6 Two-component system response regulator protein ... 269 5e-71 UniRef50_A7HAA1 Two component transcriptional regulator, LytTR f... 268 1e-70 UniRef50_B6R920 Response regulator receiver protein n=2 Tax=Prot... 268 1e-70 UniRef50_C9RCQ8 Two component transcriptional regulator, LytTR f... 265 1e-69 UniRef50_Q8DET1 Uncharacterized response regulatory protein VV1_... 261 1e-68 UniRef50_Q2RH27 Transcriptional regulator, LytR/AlgR family n=2 ... 260 2e-68 UniRef50_Q8EDD7 Uncharacterized response regulatory protein SO_2... 260 3e-68 UniRef50_Q67QS1 Two-component response regulator n=1 Tax=Symbiob... 254 2e-66 UniRef50_B5JNB1 LytTr DNA-binding domain family n=1 Tax=Verrucom... 253 4e-66 UniRef50_A4A8V2 Sensory transduction protein lytR n=2 Tax=unclas... 250 3e-65 UniRef50_B8KHY1 Response regulator n=1 Tax=gamma proteobacterium... 248 1e-64 UniRef50_Q2S5X7 Alginate biosynthesis regulatory protein n=1 Tax... 248 1e-64 UniRef50_B0TBI1 Sensory transduction protein lytt n=1 Tax=Heliob... 248 1e-64 UniRef50_Q82Z76 Sensory transduction protein lytT n=22 Tax=Enter... 247 2e-64 UniRef50_C5WEM5 Two-component response regulator n=1 Tax=Strepto... 247 2e-64 UniRef50_A1ZD68 LytTr DNA-binding response regulator n=1 Tax=Mic... 246 7e-64 UniRef50_B8FVL1 Two component transcriptional regulator, LytTR f... 244 2e-63 UniRef50_B1ZUF0 Two component transcriptional regulator, LytTR f... 243 3e-63 UniRef50_B1I1G2 Response regulator receiver protein n=1 Tax=Cand... 243 3e-63 UniRef50_B4CWB7 Two component transcriptional regulator, LytTR f... 243 4e-63 UniRef50_Q1IUM5 Transcriptional regulator, LytR/AlgR family n=1 ... 242 6e-63 UniRef50_C7MLP3 Response regulator of the LytR/AlgR family n=8 T... 242 6e-63 UniRef50_A1TXX0 Response regulator receiver protein n=3 Tax=Mari... 242 7e-63 UniRef50_Q21NI5 Response regulator receiver n=2 Tax=Alteromonada... 242 1e-62 UniRef50_B8JGA2 Two component transcriptional regulator, LytTR f... 241 1e-62 UniRef50_B1ZSR0 Two component transcriptional regulator, LytTR f... 241 2e-62 UniRef50_B1ZMA5 Two component transcriptional regulator, LytTR f... 241 2e-62 UniRef50_B9M2N5 Two component transcriptional regulator, LytTR f... 240 2e-62 UniRef50_C7PM85 Two component transcriptional regulator, LytTR f... 240 3e-62 UniRef50_B1ZQK1 Two component transcriptional regulator, LytTR f... 240 3e-62 UniRef50_Q0A576 Response regulator receiver protein n=1 Tax=Alka... 240 3e-62 UniRef50_Q2S4J5 Response regulator n=1 Tax=Salinibacter ruber DS... 239 4e-62 UniRef50_Q0HP79 Response regulator receiver protein n=20 Tax=Bac... 239 5e-62 UniRef50_C6XTW9 LytTr DNA-binding region n=3 Tax=Sphingobacteria... 239 5e-62 UniRef50_A1HLU8 Response regulator receiver protein n=1 Tax=Ther... 239 5e-62 UniRef50_Q2S053 LytTr DNA-binding domain family n=2 Tax=Rhodothe... 238 1e-61 UniRef50_C7R6S4 Two component transcriptional regulator, LytTR f... 238 1e-61 UniRef50_Q1ILF8 Transcriptional regulator, LytR/AlgR family n=1 ... 238 2e-61 UniRef50_C6W416 Two component transcriptional regulator, LytTR f... 237 2e-61 UniRef50_C1F8Y7 Response regulators of cell autolysis n=1 Tax=Ac... 237 3e-61 UniRef50_B1ZZB5 Two component transcriptional regulator, LytTR f... 236 4e-61 UniRef50_C0ZI44 Two-component response regulator n=1 Tax=Breviba... 235 8e-61 UniRef50_B7R6J5 LytTr DNA-binding domain family protein n=2 Tax=... 235 8e-61 UniRef50_Q1D286 DNA-binding response regulator n=1 Tax=Myxococcu... 235 1e-60 UniRef50_D0XXI4 Two component transcriptional regulator, LytTR f... 235 1e-60 UniRef50_Q814J1 Sensory transduction protein lytT n=81 Tax=Bacte... 234 1e-60 UniRef50_Q5WAM2 Two-component response regulator n=2 Tax=Bacillu... 234 2e-60 UniRef50_A4J8Q7 Response regulator receiver protein n=1 Tax=Desu... 234 2e-60 UniRef50_Q2SQ69 Alginate biosynthesis regulatory protein AlgR-li... 234 3e-60 UniRef50_C5RQ54 Two component transcriptional regulator, LytTR f... 233 4e-60 UniRef50_Q3AA03 DNA-binding response regulator n=1 Tax=Carboxydo... 233 4e-60 UniRef50_B3E2Y5 Two component transcriptional regulator, LytTR f... 232 7e-60 UniRef50_Q03GB5 Response regulator of the LytR/AlgR family n=7 T... 232 8e-60 UniRef50_B5YGI8 Sensory transduction protein LytT n=1 Tax=Thermo... 232 9e-60 UniRef50_Q482L9 LytTr DNA-binding response regulator n=9 Tax=Alt... 232 9e-60 UniRef50_D2PNH6 Two component transcriptional regulator, LytTR f... 231 1e-59 UniRef50_Q1IKW2 Transcriptional regulator, LytR/AlgR family n=2 ... 231 1e-59 UniRef50_C8P5Q7 Response regulator n=2 Tax=Lactobacillaceae RepI... 231 1e-59 UniRef50_Q1ISZ6 Transcriptional regulator, LytR/AlgR family n=2 ... 231 1e-59 UniRef50_Q097A8 Response regulator of the LytR/AlgR family n=1 T... 231 2e-59 UniRef50_Q484G6 LytTr DNA-binding response regulator n=1 Tax=Col... 230 2e-59 UniRef50_B8CWX9 Two component transcriptional regulator, LytTR f... 230 2e-59 UniRef50_A8VV77 Response regulator receiver protein n=1 Tax=Baci... 230 2e-59 UniRef50_C9RRP4 Two component transcriptional regulator, LytTR f... 230 3e-59 UniRef50_Q1QCQ5 Transcriptional regulator, LytR/AlgR family n=1 ... 230 4e-59 UniRef50_B5JL04 LytTr DNA-binding domain family n=1 Tax=Verrucom... 229 5e-59 UniRef50_A1ZP21 Response regulator of the LytR/AlgR family n=1 T... 229 6e-59 UniRef50_A5VAK9 Two component transcriptional regulator, LytTR f... 229 8e-59 UniRef50_C5CI41 Two component transcriptional regulator, LytTR f... 229 8e-59 UniRef50_UPI000178918B two component transcriptional regulator, ... 228 9e-59 UniRef50_A5G4A4 Two component transcriptional regulator, LytTR f... 228 1e-58 UniRef50_C1A9K0 LytT family two-component response regulator n=1... 228 1e-58 UniRef50_Q02A01 Response regulator receiver protein n=1 Tax=Cand... 228 1e-58 UniRef50_C6PV14 Two component transcriptional regulator, LytTR f... 228 1e-58 UniRef50_A4BK03 Transcriptional regulator n=1 Tax=Reinekea bland... 228 2e-58 UniRef50_A6LQW3 Two component transcriptional regulator, LytTR f... 227 2e-58 UniRef50_A4AS29 Two-component system, regulatory protein n=1 Tax... 226 3e-58 UniRef50_B5JSZ7 Response regulator receiver:LytTr DNA-binding re... 226 4e-58 UniRef50_Q317D4 Transcriptional regulator, LytR/AlgR family n=9 ... 226 4e-58 UniRef50_Q21E91 LytTr DNA-binding region n=2 Tax=Saccharophagus ... 226 5e-58 UniRef50_A0Y0Z9 Response regulator of the LytR/AlgR family prote... 226 5e-58 UniRef50_C1AAX5 LytT family two-component response regulator n=1... 225 8e-58 UniRef50_A7GIP3 DNA-binding response regulator, LytTr family n=1... 225 8e-58 UniRef50_Q0QJA1 Putative response regulator n=1 Tax=Pseudoaltero... 225 1e-57 UniRef50_C6PCY4 Two component transcriptional regulator, LytTR f... 225 1e-57 UniRef50_C3JDP1 Response regulator, two-component system n=4 Tax... 225 1e-57 UniRef50_Q26BE1 Response regulator, LytR/AlgR family n=3 Tax=Fla... 224 1e-57 UniRef50_Q1YRG1 Response regulator n=1 Tax=gamma proteobacterium... 224 1e-57 UniRef50_Q1IJW2 Transcriptional regulator, LytR/AlgR family n=1 ... 224 1e-57 UniRef50_B1HWP9 Sensory transduction protein n=2 Tax=Bacillaceae... 224 2e-57 UniRef50_Q01R04 Response regulator receiver protein n=1 Tax=Cand... 224 2e-57 UniRef50_C7PBU1 Two component transcriptional regulator, LytTR f... 224 2e-57 UniRef50_UPI0001C42EF9 two-component response regulator n=1 Tax=... 224 2e-57 UniRef50_Q3CYS0 Response regulator n=8 Tax=Streptococcus agalact... 224 2e-57 UniRef50_Q023F4 Response regulator receiver protein n=1 Tax=Cand... 224 2e-57 UniRef50_C1P760 Two component transcriptional regulator, LytTR f... 224 3e-57 UniRef50_C6W647 Two component transcriptional regulator, LytTR f... 224 3e-57 UniRef50_C1A6M9 LytT family two-component response regulator n=1... 223 5e-57 UniRef50_A0Z2B9 Response regulator receiver domain protein (CheY... 223 6e-57 UniRef50_B1YHS9 Two component transcriptional regulator, LytTR f... 223 6e-57 UniRef50_A8MGZ3 Two component transcriptional regulator, LytTR f... 223 6e-57 UniRef50_A3M1E2 Alginate biosynthesis regulatory protein n=20 Ta... 222 6e-57 UniRef50_C0ZBJ6 Two-component response regulator n=1 Tax=Breviba... 222 7e-57 UniRef50_D2QK93 Two component transcriptional regulator, LytTR f... 222 8e-57 UniRef50_Q01YJ9 Response regulator receiver protein n=1 Tax=Cand... 222 8e-57 UniRef50_A0PY89 Sensory transduction protein lytT n=3 Tax=Clostr... 222 8e-57 UniRef50_Q87K77 Uncharacterized response regulatory protein VPA0... 221 1e-56 UniRef50_A4E9X0 Putative uncharacterized protein n=1 Tax=Collins... 221 1e-56 UniRef50_D0ZEJ7 Two-component system response-regulator n=3 Tax=... 221 2e-56 UniRef50_A0LZC2 Two-component system response regulator containi... 221 2e-56 UniRef50_D0MDS1 Two component transcriptional regulator, LytTR f... 221 2e-56 UniRef50_Q7P589 Two-component response regulator n=15 Tax=Fusoba... 221 2e-56 UniRef50_B2I5K9 Two component transcriptional regulator, LytTR f... 220 2e-56 UniRef50_Q9KL96 Uncharacterized response regulatory protein VC_A... 220 3e-56 UniRef50_B1ZXP5 Two component transcriptional regulator, LytTR f... 220 3e-56 UniRef50_Q47KY1 Response regulator receiver n=1 Tax=Thermobifida... 220 3e-56 UniRef50_A6TN10 Two component transcriptional regulator, LytTR f... 220 4e-56 UniRef50_P26275 Positive alginate biosynthesis regulatory protei... 220 4e-56 UniRef50_Q0K6B3 Response regulator containing a LytTR DNA-bindin... 220 4e-56 UniRef50_A5FCC1 Two component transcriptional regulator, LytTR f... 220 4e-56 UniRef50_B8KBX1 Transcriptional regulator n=4 Tax=Vibrio RepID=B... 220 4e-56 UniRef50_C2D9N2 Two-component response regulator n=3 Tax=Corioba... 219 4e-56 UniRef50_A1HSX1 Response regulator receiver protein n=1 Tax=Ther... 219 5e-56 UniRef50_B9DL71 Two-component response regulator n=2 Tax=Staphyl... 219 5e-56 UniRef50_Q8EQQ3 Sensory transduction protein lytT n=1 Tax=Oceano... 219 6e-56 UniRef50_Q47XT5 Response regulator n=4 Tax=Gammaproteobacteria R... 218 9e-56 UniRef50_C1ABW9 Two-component response regulator n=1 Tax=Gemmati... 218 9e-56 UniRef50_C6W927 Two component transcriptional regulator, LytTR f... 218 1e-55 UniRef50_A3WHL3 Two-component response regulator n=1 Tax=Erythro... 218 1e-55 UniRef50_A9DKT5 Two-component system regulatory protein n=1 Tax=... 218 2e-55 UniRef50_D0HCT2 Response regulator n=5 Tax=Vibrio RepID=D0HCT2_V... 218 2e-55 UniRef50_Q15WR3 Response regulator receiver protein n=1 Tax=Pseu... 218 2e-55 UniRef50_D0IHA7 Response regulator n=1 Tax=Vibrio sp. RC586 RepI... 217 2e-55 UniRef50_Q025M1 Response regulator receiver protein n=1 Tax=Cand... 217 2e-55 UniRef50_Q479S3 Transcriptional regulator, LytR/AlgR family n=3 ... 217 3e-55 UniRef50_A3YCL0 Response regulator n=1 Tax=Marinomonas sp. MED12... 217 3e-55 UniRef50_Q025Y4 Response regulator receiver protein n=1 Tax=Cand... 216 4e-55 UniRef50_C9LQT9 DNA-binding response regulator n=1 Tax=Dialister... 216 4e-55 UniRef50_C7PAR0 Two component transcriptional regulator, LytTR f... 216 4e-55 UniRef50_Q3SM66 Response regulator receiver domain protein (CheY... 216 5e-55 UniRef50_A0M3D4 Two-component response regulator containing LytT... 216 5e-55 UniRef50_D2QUQ7 Two component transcriptional regulator, LytTR f... 216 7e-55 UniRef50_Q4L8V4 Sensory transduction protein lytR n=60 Tax=Bacil... 216 7e-55 UniRef50_A5FJA4 Two component transcriptional regulator, LytTR f... 216 7e-55 UniRef50_D2MJZ8 Transcriptional regulator, LytR/AlgR family n=1 ... 215 8e-55 UniRef50_B9TLS0 Positive alginate biosynthesis regulatory protei... 214 1e-54 UniRef50_Q028U9 Response regulator receiver protein n=1 Tax=Cand... 214 2e-54 UniRef50_C6VRX1 Two component transcriptional regulator, LytTR f... 214 2e-54 UniRef50_B0SFX2 Response regulator n=2 Tax=Leptospira biflexa se... 214 2e-54 UniRef50_D2QR47 Two component transcriptional regulator, LytTR f... 214 2e-54 UniRef50_Q182U2 Two-component response regulator n=5 Tax=Clostri... 214 2e-54 UniRef50_C6I7A6 Two-component system response regulator n=13 Tax... 213 3e-54 UniRef50_C7PE44 Two component transcriptional regulator, LytTR f... 213 4e-54 UniRef50_Q15WR1 Response regulator receiver protein n=1 Tax=Pseu... 213 5e-54 UniRef50_A4BAR2 Alginate biosynthesis regulatory protein AlgR-li... 213 6e-54 UniRef50_A4E9W5 Putative uncharacterized protein n=1 Tax=Collins... 212 8e-54 UniRef50_C7PII0 Two component transcriptional regulator, LytTR f... 212 1e-53 UniRef50_Q1YSU3 Two-component system regulatory protein n=1 Tax=... 212 1e-53 UniRef50_B1KPY2 Two component transcriptional regulator, LytTR f... 211 1e-53 UniRef50_Q04FG9 Response regulator of the LytR/AlgR family n=2 T... 211 1e-53 UniRef50_Q11YH0 Response regulator n=1 Tax=Cytophaga hutchinsoni... 211 1e-53 UniRef50_C0Z807 Two-component response regulator n=1 Tax=Breviba... 211 2e-53 UniRef50_A5F9U3 Two component transcriptional regulator, LytTR f... 211 2e-53 UniRef50_A4C6V8 Two-component system, regulatory protein n=1 Tax... 210 3e-53 UniRef50_Q5R0R5 Response regulator of the LytR/AlgR family n=1 T... 210 4e-53 UniRef50_A8F4Q4 Two component transcriptional regulator, LytTR f... 209 5e-53 UniRef50_B9E9A6 Putative uncharacterized protein n=1 Tax=Macroco... 209 6e-53 UniRef50_C7PS97 Two component transcriptional regulator, LytTR f... 209 7e-53 UniRef50_C7MZZ5 Response regulator of the LytR/AlgR family n=3 T... 209 7e-53 UniRef50_A3UEG7 Two-component system regulatory protein n=1 Tax=... 209 9e-53 UniRef50_C9NAB5 Two component transcriptional regulator, LytTR f... 208 1e-52 UniRef50_B0MWM6 Putative uncharacterized protein n=2 Tax=Bactero... 208 1e-52 UniRef50_C5C1Z4 Two component transcriptional regulator, LytTR f... 208 1e-52 UniRef50_C1AAC5 LytT family two-component response regulator n=1... 208 2e-52 UniRef50_C6Y3C9 Response regulator receiver n=1 Tax=Pedobacter h... 207 2e-52 UniRef50_A1ZQ18 Transcriptional regulator protein n=1 Tax=Micros... 207 2e-52 UniRef50_A4CHH8 LytTr DNA-binding domain family protein n=5 Tax=... 207 3e-52 UniRef50_Q3BTS0 Two-component system regulatory protein n=2 Tax=... 206 4e-52 UniRef50_Q2N6M0 Two-component response regulator n=7 Tax=Sphingo... 206 4e-52 UniRef50_Q8A855 Two-component system response regulator n=1 Tax=... 206 5e-52 UniRef50_A6G9H1 LytTr DNA-binding domain family protein n=1 Tax=... 205 8e-52 UniRef50_C0INH2 Two-component system response regulator protein ... 205 1e-51 UniRef50_A6ER53 Putative two-component system response regulator... 205 1e-51 UniRef50_A8UEA9 Two-component system response regulator n=1 Tax=... 205 1e-51 UniRef50_D0LSR9 Two component transcriptional regulator, LytTR f... 205 1e-51 UniRef50_D2QPM9 Two component transcriptional regulator, LytTR f... 205 1e-51 UniRef50_C7PMC2 Two component transcriptional regulator, LytTR f... 204 2e-51 UniRef50_C6W0C7 Two component transcriptional regulator, LytTR f... 204 2e-51 UniRef50_D2QDN3 Two component transcriptional regulator, LytTR f... 204 2e-51 UniRef50_D2QEL1 Two component transcriptional regulator, LytTR f... 204 3e-51 UniRef50_C7PA86 Two component transcriptional regulator, LytTR f... 203 3e-51 UniRef50_C6W252 Two component transcriptional regulator, LytTR f... 203 3e-51 UniRef50_Q21DS4 Response regulator receiver n=2 Tax=Alteromonada... 203 4e-51 UniRef50_C6W213 Two component transcriptional regulator, LytTR f... 203 4e-51 UniRef50_C7M7B0 Two component transcriptional regulator, LytTR f... 203 5e-51 UniRef50_B0RWJ0 Transcriptional regulator protein n=11 Tax=Prote... 203 5e-51 UniRef50_C6W312 Two component transcriptional regulator, LytTR f... 203 6e-51 UniRef50_C6VU69 Two component transcriptional regulator, LytTR f... 203 7e-51 UniRef50_C6VTD2 Two component transcriptional regulator, LytTR f... 202 8e-51 UniRef50_Q3IEB4 Putative alginate biosynthesis regulatory protei... 202 8e-51 UniRef50_D2QI00 Two component transcriptional regulator, LytTR f... 202 1e-50 UniRef50_D2QJ93 Two component transcriptional regulator, LytTR f... 201 1e-50 UniRef50_A0LTS8 Response regulator receiver protein n=1 Tax=Acid... 201 1e-50 UniRef50_A6EI22 Response regulator n=1 Tax=Pedobacter sp. BAL39 ... 201 1e-50 UniRef50_A6EIX0 Two-component system response regulator n=1 Tax=... 201 2e-50 UniRef50_C6XVI3 Response regulator receiver n=2 Tax=Sphingobacte... 201 3e-50 UniRef50_Q1VYF8 Two-component system response regulator protein ... 201 3e-50 UniRef50_A6G241 Response regulator receiver protein n=1 Tax=Ples... 200 3e-50 UniRef50_A7T6N4 Predicted protein n=4 Tax=cellular organisms Rep... 200 3e-50 UniRef50_A5FL89 Transcriptional regulator, LytR/AlgR family n=1 ... 200 4e-50 UniRef50_Q7P1K6 Probable two-component system, regulatory protei... 200 4e-50 UniRef50_Q8E7H3 Sensory transduction protein lytR n=8 Tax=Strept... 199 5e-50 UniRef50_B9MFI3 Two component transcriptional regulator, LytTR f... 199 5e-50 UniRef50_B2V8S8 Two component transcriptional regulator, LytTR f... 199 5e-50 UniRef50_C2G2I4 Response regulator n=1 Tax=Sphingobacterium spir... 199 5e-50 UniRef50_C6XUE8 LytTr DNA-binding region n=2 Tax=Pedobacter RepI... 199 5e-50 UniRef50_C6IC21 Two-component system response regulator n=14 Tax... 199 6e-50 UniRef50_A1ZFR4 Two-component system response regulator protein ... 199 7e-50 UniRef50_A8UPH3 Response regulator n=2 Tax=Bacteroidetes RepID=A... 199 7e-50 UniRef50_A6LDC2 Two-component system response regulator protein ... 199 7e-50 UniRef50_Q2RI16 Transcriptional regulator, LytR/AlgR family n=1 ... 199 8e-50 UniRef50_C0A760 Response regulator receiver protein n=1 Tax=Opit... 199 9e-50 UniRef50_A1ZI08 Two-component system response regulator n=3 Tax=... 198 1e-49 UniRef50_D2QDG4 Two component transcriptional regulator, LytTR f... 198 1e-49 UniRef50_C6XX74 LytTr DNA-binding region n=5 Tax=Bacteroidetes R... 198 1e-49 UniRef50_A5FIV7 Two component transcriptional regulator, LytTR f... 198 1e-49 UniRef50_B7IG84 Autolysin response regulator n=1 Tax=Thermosipho... 198 1e-49 UniRef50_A1ZS31 Two-component system response regulator n=1 Tax=... 198 1e-49 UniRef50_A1ZK58 Two-component system response regulator protein ... 198 1e-49 UniRef50_A7HMG0 Two component transcriptional regulator, LytTR f... 198 1e-49 UniRef50_A5FIA9 Two component transcriptional regulator, LytTR f... 198 1e-49 UniRef50_Q8DVB7 Sensory transduction protein lytR n=3 Tax=Strept... 198 2e-49 UniRef50_A7AJK4 Putative uncharacterized protein n=2 Tax=Parabac... 197 3e-49 UniRef50_D2QHW7 Two component transcriptional regulator, LytTR f... 197 3e-49 UniRef50_B3JKI8 Putative uncharacterized protein n=3 Tax=Bactero... 197 3e-49 UniRef50_C7PT73 Two component transcriptional regulator, LytTR f... 197 3e-49 UniRef50_A5FB58 Two component transcriptional regulator, LytTR f... 197 3e-49 UniRef50_A9WL18 Two-component response regulator n=4 Tax=Microco... 196 4e-49 UniRef50_A4C5W8 Two-component system response regulator protein ... 196 7e-49 UniRef50_Q39P82 Transcriptional regulator, LytR/AlgR family n=21... 196 8e-49 UniRef50_C6WYV3 Two component transcriptional regulator, LytTR f... 196 8e-49 UniRef50_C6WDP6 Two component transcriptional regulator, LytTR f... 195 1e-48 UniRef50_C6BHH2 Two component transcriptional regulator, LytTR f... 195 1e-48 UniRef50_C7PNX8 Two component transcriptional regulator, LytTR f... 195 1e-48 UniRef50_A6EH20 Response regulator n=1 Tax=Pedobacter sp. BAL39 ... 194 1e-48 UniRef50_C7PR40 Two component transcriptional regulator, LytTR f... 194 1e-48 UniRef50_A6FYA0 LytTr DNA-binding domain family protein n=1 Tax=... 194 2e-48 UniRef50_C6VRP4 Two component transcriptional regulator, LytTR f... 194 2e-48 Sequences not found previously or not previously below threshold: >UniRef50_P0AFT7 Uncharacterized response regulatory protein yehT n=180 Tax=Proteobacteria RepID=YEHT_ECO57 Length = 239 Score = 346 bits (889), Expect = 3e-94, Method: Composition-based stats. Identities = 239/239 (100%), Positives = 239/239 (100%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI Sbjct: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS Sbjct: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR Sbjct: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 Query: 181 TLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL 239 TLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL Sbjct: 181 TLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL 239 >UniRef50_C6CMQ8 Two component transcriptional regulator, LytTR family n=3 Tax=Dickeya RepID=C6CMQ8_DICZE Length = 241 Score = 313 bits (804), Expect = 2e-84, Method: Composition-based stats. Identities = 160/239 (66%), Positives = 202/239 (84%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+ VLIVDDEPLAR+NLR L++ +E+VGEC+NAVE I A+H+L PDV+FLDIQMPRI Sbjct: 1 MLSVLIVDDEPLARDNLRCLLEQDDGLELVGECANAVEAISAIHRLHPDVVFLDIQMPRI 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SGLEM+GM+DP++ PYIVF+TA+DEYAIKAFEE AFDYLLKPID RL KTL L +ER Sbjct: 61 SGLEMIGMIDPDNMPYIVFITAYDEYAIKAFEEQAFDYLLKPIDPQRLAKTLRNLHRERP 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 Q++ L ++Q+ L +IPCTGHSRIYL++ +V F SR SGVYVT +G+E FTELTL+ Sbjct: 121 AQNIDTLSDHQRGLDYIPCTGHSRIYLMKSSEVQFARSRQSGVYVTGPQGEECFTELTLK 180 Query: 181 TLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL 239 TLESRTPL+RCHRQYLVN+ HL+EIRLE++GQAE++L++G +PVSRRYLK+LK+ +GL Sbjct: 181 TLESRTPLVRCHRQYLVNMDHLREIRLEESGQAEILLKSGQALPVSRRYLKTLKQLLGL 239 >UniRef50_Q2RYN6 Two-component system response regulator protein n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RYN6_SALRD Length = 322 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 90/253 (35%), Positives = 140/253 (55%), Gaps = 19/253 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ LIVDDEPLAR +R ++ D+ I+GE ++ E + + PD++FLD+QMP +S Sbjct: 68 IRALIVDDEPLARTGVRQLVEPLDDVTILGEATDGDEAVRQIEAQAPDLVFLDVQMPEMS 127 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GLE+V + E P +F+TA+D+YA+ AFE HA DYLLKPI+E R E+ + R RQ+ + Sbjct: 128 GLEVVREVGVEAMPLTIFVTAYDQYALDAFEAHALDYLLKPIEEDRFEEAMERARQQLRQ 187 Query: 122 QDVSLLPENQQ-------------ALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSH 168 + L E + ++ RIY + +DV ++ S G YV H Sbjct: 188 VEADTLNEQLRGVLREYADAGETGGIERFTIRSRDRIYFVDAEDVQWIESE--GDYVALH 245 Query: 169 EGKE-GFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVP 224 +G + T++ LE + LR HR Y+VN+ H+ E+R D+G +L + NG + Sbjct: 246 DGDDAHLVRKTMKKLEEQLDPDQFLRVHRSYIVNVEHIDELRPLDHGTYQLRMANGTPLK 305 Query: 225 VSRRYLKSLKEAI 237 SR Y ++ + Sbjct: 306 TSRGYSDNIDALL 318 >UniRef50_A7HAA1 Two component transcriptional regulator, LytTR family n=2 Tax=Deltaproteobacteria RepID=A7HAA1_ANADF Length = 236 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 113/239 (47%), Positives = 154/239 (64%), Gaps = 3/239 (1%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M++ LIVDDEP AR LR L++ +EI GEC NAVE + AV + RPDVLFLD+QMP + Sbjct: 1 MMRALIVDDEPGARAELRALLEQTGAVEIAGECPNAVEALNAVQRERPDVLFLDVQMPVV 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G E++ MLD + P +VF+TA D +A++AFEE A DYLLKP+ RL KT+ +L + S Sbjct: 61 NGFELLAMLDEDVLPAVVFVTAHDAFALRAFEESAADYLLKPVTRERLAKTVEKLARRTS 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 +P L +PC I L+ + +V V S +GVYV + G E T+LTLR Sbjct: 121 PAPRPTVPA--PPLTRVPCLAGKAIKLVPLAEVDHVRSSAAGVYVVTAAG-EFLTDLTLR 177 Query: 181 TLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL 239 LE R L+RCH+Q+LVNL + EIR ++ A + R G VPVSRR+L +L+E +GL Sbjct: 178 VLEERGGLVRCHKQHLVNLERIDEIRPGEDPAATVRTRAGHLVPVSRRFLAALRERLGL 236 >UniRef50_B6R920 Response regulator receiver protein n=2 Tax=Proteobacteria RepID=B6R920_9RHOB Length = 236 Score = 268 bits (685), Expect = 1e-70, Method: Composition-based stats. Identities = 126/238 (52%), Positives = 169/238 (71%), Gaps = 4/238 (1%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI LIVDDEP ARE L+ L + DIE+ GECSNA++ +G ++K +P ++FLDIQMPRI Sbjct: 1 MISCLIVDDEPYAREELKDLLSKADDIEVTGECSNAIDALGFINKHKPQLVFLDIQMPRI 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SG+EM+GMLDPE P IVF TA+DEYAIKAFE HAFDYLLKPI+E RL KTL+R+R + Sbjct: 61 SGMEMIGMLDPETMPRIVFSTAYDEYAIKAFEHHAFDYLLKPIEEERLAKTLSRVRSDLR 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 Q + + Q L+ +PC +++ ++ + V +V S +SG++V + E T LTL+ Sbjct: 121 PQLMEEII--PQELQHLPCYLGNKLKVVPVHAVEYVFSDLSGIHVATAECYVH-THLTLK 177 Query: 181 TLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIG 238 LE RT L RCHRQYLV+ + EI L++ G AE++ +G +PVSRRYLKSLK+ G Sbjct: 178 VLEQRTSLARCHRQYLVSPDAISEIVLQETG-AEVVTHSGTKIPVSRRYLKSLKQHFG 234 >UniRef50_C9RCQ8 Two component transcriptional regulator, LytTR family n=1 Tax=Ammonifex degensii KC4 RepID=C9RCQ8_AMMDK Length = 265 Score = 265 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 90/253 (35%), Positives = 131/253 (51%), Gaps = 16/253 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++VDDEPLAR+ L+ L + +I+GE NA E + V +LRPDV+FLDI+M S Sbjct: 3 FTAIVVDDEPLARDELKYLLSFHPECQIIGEADNAEEALKLVVELRPDVVFLDIRMRGTS 62 Query: 62 GLEMV-GMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR---- 116 G E ML H P +VF TA+D+YA+ AFE A DY+LKP + RL +T+ RL Sbjct: 63 GFEAAKRMLSLPHPPLVVFATAYDDYAVGAFELGAVDYILKPFEPERLAQTVRRLSSFKS 122 Query: 117 -----QERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGK 171 +E ++ LL E LK +P I L+ +D+ F + V + + Sbjct: 123 QSARWEEALERLSQLLEEGPPKLKKLPVEKEGEIRLIPYQDIIFAQAHEGEALVHTAN-E 181 Query: 172 EGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT--VPVS 226 + TL LE R LR H+ +LVNLA + + G +I+ + +PVS Sbjct: 182 YFYYRGTLAELEGRLKNHGFLRVHKSFLVNLARIGGLVPWFKGTYWVIMEDDKRTHIPVS 241 Query: 227 RRYLKSLKEAIGL 239 + +K LK +GL Sbjct: 242 KAQVKQLKALLGL 254 >UniRef50_Q8DET1 Uncharacterized response regulatory protein VV1_0503 n=56 Tax=Gammaproteobacteria RepID=Y503_VIBVU Length = 242 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 118/241 (48%), Positives = 174/241 (72%), Gaps = 3/241 (1%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+ L++DDEP ARE L L E DI+++G+ +NA+ G+ +++L+PDV+FLDIQMP++ Sbjct: 1 MLTALVIDDEPFAREELTDLLSETGDIDVIGDAANAIVGLKKINELKPDVVFLDIQMPQV 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G+E++GM+DP+ PY+VF+TA+D+YAI+AFE++AFDYLLKP+D RL KT+ RL + S Sbjct: 61 TGIELLGMMDPDTMPYVVFVTAYDQYAIQAFEDNAFDYLLKPVDPERLRKTVKRLSKAAS 120 Query: 121 KQDVSLLPEN--QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELT 178 +S + + L IPC GH+RI ++ + V S +SGV+V S + T+LT Sbjct: 121 HSALSQHIASLAPETLDQIPCIGHNRIVIMATESVECAYSDISGVHVRSA-SQTASTQLT 179 Query: 179 LRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIG 238 L+ LE +T L+RCHRQYL+++ + EI+L +NG AE+I + G VPVSRRYLK LKE +G Sbjct: 180 LKVLEEKTSLVRCHRQYLISIKAISEIKLLENGLAEIITKTGFEVPVSRRYLKLLKEMLG 239 Query: 239 L 239 L Sbjct: 240 L 240 >UniRef50_Q2RH27 Transcriptional regulator, LytR/AlgR family n=2 Tax=Clostridia RepID=Q2RH27_MOOTA Length = 255 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 87/253 (34%), Positives = 138/253 (54%), Gaps = 16/253 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++VDD+PLAR+ L+ L + +++GE + E + V +L PDV+FLDI+M +S Sbjct: 3 FTAVVVDDQPLARDELKYLLSAYEECQVIGEAEDGGEALQLVARLHPDVVFLDIEMRGMS 62 Query: 62 GLEMVG-MLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G + ML P IVF TA++EYA+ AFE A DYLLKP + RL KT+ R++ ++ Sbjct: 63 GYDAARKMLAEPKPPLIVFATAYNEYAVGAFELGAIDYLLKPFVDERLAKTIERIKNLKA 122 Query: 121 KQD---------VSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGK 171 +Q+ LL +NQQ++K +P + I LL D+ + +R GV V + + Sbjct: 123 RQEDWQEAVARVARLLEDNQQSVKKLPVEKNGAIKLLDYGDIFYGRARGGGVQVFTTDDS 182 Query: 172 EGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN--GLTVPVS 226 F+ T+ LE R R H+ +LVNL ++ + G L++ + +PVS Sbjct: 183 YTFS-GTMAELEERLNREGFFRVHKSFLVNLRKVEGVLPWFKGTYWLVMGDRKRTQIPVS 241 Query: 227 RRYLKSLKEAIGL 239 + +K LK +GL Sbjct: 242 KGQVKELKVLLGL 254 >UniRef50_Q8EDD7 Uncharacterized response regulatory protein SO_2823 n=18 Tax=Shewanella RepID=Y2823_SHEON Length = 236 Score = 260 bits (666), Expect = 3e-68, Method: Composition-based stats. Identities = 124/239 (51%), Positives = 173/239 (72%), Gaps = 4/239 (1%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI LIVDDE ARE L L +++DIEI+G+CSNA+E + + K +P ++FLDIQMPRI Sbjct: 1 MITCLIVDDELFAREELADSLSQEADIEIIGQCSNAIEALQTITKEKPQLVFLDIQMPRI 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SG+E++ MLDP+ P IVF+TAFDE+A+KAF+ HAFDYLLKPID RL KTL R+R++ + Sbjct: 61 SGMELIAMLDPDTLPKIVFVTAFDEFAVKAFDNHAFDYLLKPIDADRLSKTLKRVRKDLT 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 Q V+L+ ++L+ +PC S++ ++ ++DV +V S +SG++V +GK T+LTL+ Sbjct: 121 PQAVNLIA--PRSLEHLPCYSGSKLKVIPIQDVEYVFSDLSGIHVACTKGKVH-TQLTLK 177 Query: 181 TLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL 239 LE +TPL+ CHRQYL++ + EI L D G AE+ G VPVSRRYLKSLK+ G Sbjct: 178 VLEEKTPLVHCHRQYLISPKAIAEIELLDTG-AEVTTLLGDKVPVSRRYLKSLKQLFGF 235 >UniRef50_Q67QS1 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QS1_SYMTH Length = 256 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 90/256 (35%), Positives = 138/256 (53%), Gaps = 18/256 (7%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M++ LIVDDE AR LR L + D+E++GE +NA E + ++ L DV+FLD+QMP + Sbjct: 1 MLRALIVDDEYPARMELRYQLSQFPDVEVIGEATNAREAMALINALDYDVIFLDVQMPGM 60 Query: 61 SGLEMVGMLD-PEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +G+E+ L P +VF+TA++ YA+ AFE A DYLLKPI+ RL +T+ RLR+ + Sbjct: 61 TGIELAKSLKGRPVMPKVVFVTAYENYAVSAFEIPATDYLLKPIEAERLGETIQRLREAK 120 Query: 120 SKQDVSLLPE-----------NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSH 168 PE ++ L F+ C + L + ++ ++ S VYV ++ Sbjct: 121 EAAAGEARPEASEGAERPAGASKPQLTFLMCEKDDKQIPLPLNEIVYIFSEGYNVYVQTY 180 Query: 169 EGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL--TV 223 + T TL+ L R P R HR YLVN+ ++EI NG L L++ V Sbjct: 181 -SERYLTRHTLQELTERLPSSQFFRSHRSYLVNIYQVKEISPYFNGAYILKLKDKEHSEV 239 Query: 224 PVSRRYLKSLKEAIGL 239 VSR +K +K+ + Sbjct: 240 IVSRSNVKRMKQLFSM 255 >UniRef50_B5JNB1 LytTr DNA-binding domain family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JNB1_9BACT Length = 253 Score = 253 bits (646), Expect = 4e-66, Method: Composition-based stats. Identities = 83/246 (33%), Positives = 130/246 (52%), Gaps = 13/246 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K+LIVDDEP AR L++FL + + E +N E + + PD+ FLDIQMP ++ Sbjct: 5 LKILIVDDEPPARAKLKLFLSDCLPDATLYEAANGTEALELLESAAPDLAFLDIQMPGMT 64 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GLE+V PE P ++F TA+D+YA+KAFE +A DYLLKP D+ R K L + + Sbjct: 65 GLEVVEAFGPEEMPPLIFTTAYDQYAVKAFEHNAVDYLLKPFDDRRFRKALDKATSKLVP 124 Query: 122 Q---------DVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 ++ + L+ I + RI + + D+ ++ + V + K Sbjct: 125 SPTLDSALLTQLAASIQQPSYLERIMVRENDRIIPILVSDIHWLEADDKYVRIHLSTSKR 184 Query: 173 GFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRY 229 T+ LE R +R HR +VNL +QE+ +G ++ L++G T+P+SRRY Sbjct: 185 YI-RNTISNLEKRLDTKNFVRTHRSTIVNLDQIQELESLTHGDYQIRLKSGTTLPLSRRY 243 Query: 230 LKSLKE 235 LK+ Sbjct: 244 ADHLKD 249 >UniRef50_A4A8V2 Sensory transduction protein lytR n=2 Tax=unclassified Gammaproteobacteria RepID=A4A8V2_9GAMM Length = 274 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 79/270 (29%), Positives = 132/270 (48%), Gaps = 35/270 (12%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + +IVDDE LAR L + LQ+ +++++ EC N E + AV + PD+LFLDIQMP + Sbjct: 4 LSAIIVDDEHLARRGLSMRLQQLPEVDVIAECGNGQEALLAVAQHSPDLLFLDIQMPGMD 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E+V L + P ++F+TA++EYA+ AF+ HA DY+LKPI++ RL + + R R + Sbjct: 64 GFEVVENLQGDDMPMVIFVTAYNEYAVDAFKVHAIDYVLKPIEDDRLHEAVQRAVAHRDQ 123 Query: 122 QDVSLLPENQQAL-------------------------------KFIPCTGHSRIYLLQM 150 ++ + E L + I + I +++ Sbjct: 124 ENSTSGKEKLIKLLMSVTGESAAGIEAMAEGVSTEGASSQDSWPEKITVKDGNDIQFIRV 183 Query: 151 KDVAFVSSRMSGVYVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRL 207 D+ +V + + + GK +T++ LE+ LR HR +VN + + Sbjct: 184 ADIEWVDAAGDYMCIH-ATGKTHIMRITMKQLEAMLNPALFLRVHRSTIVNNRCVTGAQT 242 Query: 208 EDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 NG+ L L G + VSR Y ++E + Sbjct: 243 LTNGEYLLNLEGGTQLKVSRSYKDRIREFL 272 >UniRef50_B8KHY1 Response regulator n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KHY1_9GAMM Length = 262 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 92/263 (34%), Positives = 142/263 (53%), Gaps = 29/263 (11%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++VLIVDDEPLAR+ L L+ ++E+VG S+ E + + RPDVL LDI+MP ++ Sbjct: 1 MRVLIVDDEPLARDLLLEHLKANPEVEVVGAASSGREALVFIRSHRPDVLLLDIEMPGMN 60 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR---- 116 G +V L +H P ++F+TAFD YA+ AF+++A DY+LKP+D ARL+K L R R Sbjct: 61 GFALVESLQADDHMPLVIFVTAFDRYAVDAFDKNAVDYILKPVDGARLQKALLRARGRLL 120 Query: 117 ---------------QERSKQDVSL---LPENQQALKFIPCTGHSRIYLLQMKDVAFVSS 158 Q+ ++ +S+ L A+ +P + LL++ D+ +V + Sbjct: 121 DGSKAKLLRAITAVGQQPGREALSVAEALDSYSDAVGRLPVRQGDSVQLLELDDIEWVDA 180 Query: 159 RMSGVYVTSHEGKEGFT-ELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAE 214 +G Y+ H G E + T++ L R P R HR LVNL +QEI G+ Sbjct: 181 --AGDYMCVHAGGETYILRCTMKQLSDRLSLGPFARIHRSTLVNLNKIQEITPLSKGECL 238 Query: 215 LILRNGLTVPVSRRYLKSLKEAI 237 L L N + VSR Y +++ + Sbjct: 239 LHLGNDTRLKVSRNYRSAIQHLL 261 >UniRef50_Q2S5X7 Alginate biosynthesis regulatory protein n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S5X7_SALRD Length = 252 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 97/250 (38%), Positives = 140/250 (56%), Gaps = 14/250 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 ++ L+VDDEPLARE LR L E D+E+V E E + +H P V+FLD+QMP + Sbjct: 3 MRCLVVDDEPLARERLRALLDEADEDVEVVAEAEGGKEAVSLIHDREPSVVFLDVQMPVL 62 Query: 61 SGLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 G ++V +L +P RP+IVF+TA+DEYAI+AFE A DYL KP+ RL KTL R++ Sbjct: 63 GGFDVVDLLPEPGQRPHIVFVTAYDEYAIQAFEARALDYLTKPVRLERLNKTLGRVQDAL 122 Query: 120 SKQDVSLLPE--------NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGK 171 + D QALK + R+ ++ +++V ++ + V+ + EG Sbjct: 123 ANDDAREQENLDDLRDSRQDQALKRLTVHVGHRLRVVPLEEVRWIEADEGFVFAHT-EGG 181 Query: 172 EGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRR 228 T+ TL LESR P +R HR +VNL E+ E G A L L++G V V+RR Sbjct: 182 RYRTDFTLEELESRLPPTRFVRVHRSTIVNLDAAYELVPEPAGTATLRLQDGTEVKVARR 241 Query: 229 YLKSLKEAIG 238 ++ AIG Sbjct: 242 RTDDVRSAIG 251 >UniRef50_B0TBI1 Sensory transduction protein lytt n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TBI1_HELMI Length = 238 Score = 248 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 79/243 (32%), Positives = 132/243 (54%), Gaps = 12/243 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +KV+I +DEPL+RE L L++ D+E+ N E + + +P ++FLDI+MP ++ Sbjct: 1 MKVMIAEDEPLSREELEYLLRQAEDVELCPSARNGKELLRLQKEHQPQLIFLDIEMPELN 60 Query: 62 GLEMVGMLDPEH-RPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+E V L P I+F TA+++YA++AF A DYLLKP+DE RL ++L R RQ Sbjct: 61 GVEAVRQLAEASAPPLIIFTTAYEQYAVEAFGLRALDYLLKPVDEERLFESLQRARQRLQ 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + P + I ++ +++ + + + V + G+ T LT++ Sbjct: 121 ESAPPKTP-----ISNILLEEGDKLIVVKPERIYYAEKEERRVVIYCDRGR-FETRLTMQ 174 Query: 181 TLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILR--NGLTVPVSRRYLKSLKE 235 L+ + P +RCHR +LVNL ++ EI NG +IL+ G +PVSR K++ + Sbjct: 175 ELQDKLSGHPFVRCHRSFLVNLDYVDEIEPWQNGTYNIILKGIGGTKLPVSRSAAKNVLQ 234 Query: 236 AIG 238 + Sbjct: 235 RLN 237 >UniRef50_Q82Z76 Sensory transduction protein lytT n=22 Tax=Enterococcus faecalis RepID=LYTT_ENTFA Length = 242 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 84/242 (34%), Positives = 133/242 (54%), Gaps = 5/242 (2%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + VLIVDDEPLARE L + + + V E + E + + +PD+LFLDI + S Sbjct: 1 MHVLIVDDEPLAREELSYLVSQHPQVTSVAEADSVAEAMEEMMDQKPDLLFLDIHLTDES 60 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G ++ L + PY+VF TA+D+YA+KAF+ +A DY+LKP +E ++ + + + +E Sbjct: 61 GFDLAEKLTHLKKAPYLVFATAYDQYALKAFQVNAKDYILKPFEEEKITQVIEKASKEMG 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + E + IP G RIYL+ +D+ VS + + + T TL Sbjct: 121 QAVPENTAEKGPKSEAIPIQGEDRIYLVAPEDIYLVSVEERQLSIFVDQQVYKMT-GTLN 179 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 ++E + P ++ HR +++N +QEI+ N ++IL NG VPVSR Y+K KE + Sbjct: 180 SIEQKLPATLFIKTHRSFILNRTKIQEIQPWFNNTLQVILTNGSKVPVSRSYVKEFKEKL 239 Query: 238 GL 239 GL Sbjct: 240 GL 241 >UniRef50_C5WEM5 Two-component response regulator n=1 Tax=Streptococcus dysgalactiae subsp. equisimilis GGS_124 RepID=C5WEM5_STRDG Length = 242 Score = 247 bits (631), Expect = 2e-64, Method: Composition-based stats. Identities = 76/243 (31%), Positives = 130/243 (53%), Gaps = 6/243 (2%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +KV+I+DDEPLAR L ++E + + + + + + +PD+LFLDI + S Sbjct: 1 MKVVIIDDEPLARMELAYLVEETQMVSAIYQGESIEDAFQLILTHQPDLLFLDIHLTDES 60 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GL++ L + P I+F TA+D +A++AFE +A DY+LKP ++AR++K +A+ + Sbjct: 61 GLDLAKRLSQIPNAPLIIFATAYDNHAVEAFEVNAIDYVLKPFEQARIQKAIAKAKMTLD 120 Query: 121 KQDVSLLPENQ-QALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 +Q + E + K + RIYLL D+ + + V + + +L Sbjct: 121 RQQTNHSKEAEVPQTKRLTLEVDERIYLLPFSDILYCEVQGKETTVYTKTA-HYTSHTSL 179 Query: 180 RTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEA 236 +E L+ HR YL+N ++EI+ N ++ + NG VPVSR YLK+ ++ Sbjct: 180 SAIEKVLTTESFLKVHRSYLINTQAIKEIQPWFNQTYQVTMINGGKVPVSRSYLKTFRQR 239 Query: 237 IGL 239 +GL Sbjct: 240 LGL 242 >UniRef50_A1ZD68 LytTr DNA-binding response regulator n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZD68_9SPHI Length = 254 Score = 246 bits (628), Expect = 7e-64, Method: Composition-based stats. Identities = 90/253 (35%), Positives = 142/253 (56%), Gaps = 17/253 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IK LIVDDE LAR+ L +FLQE+ D EIVG+CSN +E + + PD+LFLD+QMP + Sbjct: 4 IKTLIVDDEALARDKLAIFLQEEEDFEIVGQCSNGIEALQLLRDSYPDLLFLDVQMPEMD 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE--- 118 G+E++ +D + P I+ +TA+D YA++AFE HA DYLLKP D R T+ R++++ Sbjct: 64 GMELLRNIDVQKIPCIILVTAYDNYALQAFEYHALDYLLKPFDRERFLMTIKRVKEQMLL 123 Query: 119 -----RSKQDVSLLPEN---QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEG 170 Q ++ L ++ ++ L+ I +I+ ++ KDV +V S +G Y+ H G Sbjct: 124 HSQGNHQTQLLTYLKDSLPKEKYLEKIVVKDGGKIFFVKTKDVEWVES--AGNYLKLHIG 181 Query: 171 KE-GFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVS 226 K T+ E + +R HR LVN+ + + N + + L +G V Sbjct: 182 KSMHLIRETMNAFEQKLNPQEFVRVHRSSLVNIEAIHHLESWGNTEFTITLSSGYQVQSG 241 Query: 227 RRYLKSLKEAIGL 239 R Y S+++ + L Sbjct: 242 RSYYSSIRQKLQL 254 >UniRef50_B8FVL1 Two component transcriptional regulator, LytTR family n=8 Tax=Clostridia RepID=B8FVL1_DESHD Length = 268 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 82/267 (30%), Positives = 139/267 (52%), Gaps = 30/267 (11%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ L+VDDE AR+ LR LQ+ +D++++GE +NA+E + ++ L V+FLDI MP + Sbjct: 3 LRALLVDDESPARKELRYLLQDYTDLQVIGEAANAIEALELINNLEYSVVFLDIDMPGLK 62 Query: 62 GLEMVGMLD-PEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+++ L E P I+F+TA +E+A+ AF +A DYLLKPI+ RL++ + +L + Sbjct: 63 GIDLARQLKEKESSPAIIFITAHEEFAVDAFCVNALDYLLKPINPKRLDQAIKKLFIQHG 122 Query: 121 KQDVSLLPENQQ-----------------------ALKFIPCTGHSRIYLLQMKDVAFVS 157 P + L+ IP + LL+ +++ ++ Sbjct: 123 AGTPPASPSLSEPDEPTTATDTPLPKQPPENSTIRPLEVIPVEQRGKTILLRPEEIVYIY 182 Query: 158 SRMSGVYVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAE 214 + V+ + + + T TLR LE+R R HR YLVN+ ++E+ NG Sbjct: 183 TDKDNVFAKT-QKESYLTRFTLRELEARLNPNLFFRTHRCYLVNIKRMRELIPYFNGTYS 241 Query: 215 LILRNGL--TVPVSRRYLKSLKEAIGL 239 +++ + VPVSR + LKE +GL Sbjct: 242 IVVDDHERSEVPVSRTQSRKLKEILGL 268 >UniRef50_B1ZUF0 Two component transcriptional regulator, LytTR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZUF0_OPITP Length = 276 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 78/268 (29%), Positives = 134/268 (50%), Gaps = 33/268 (12%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+VLIVDDEPLARE L + + ++G+C++ + + + +LRPD+LFLD+QMP + Sbjct: 4 IRVLIVDDEPLAREGLALMAGADPAVAVIGQCADGLTAVTQIRELRPDLLFLDVQMPGLD 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ---- 117 G E++ L P RP ++F+TAF+++AI+AFE A DYLLKP +AR L R ++ Sbjct: 64 GFEVLAALPPAERPAVIFVTAFEQHAIQAFEVCAVDYLLKPCSDARFASALLRAKEGIRQ 123 Query: 118 -------------------------ERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKD 152 ++ + + P + I ++ ++ +D Sbjct: 124 RHLGQLSARLEQLLEYVRNLESGASPQAARVAEIQPTAPEPANRIVVKADGALHFIKKQD 183 Query: 153 VAFVSSRMSGVYVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLED 209 V ++ ++ V V + K TL++ E + LR HR ++VNL H++ + Sbjct: 184 VLWIEAQGDFVKVQTAT-KTQLVRETLQSFERKLDPAKFLRIHRSFVVNLDHVRRVETAL 242 Query: 210 NGQAELILRNGLTVPVSRRYLKSLKEAI 237 G + + +G + +SR Y LK + Sbjct: 243 YGDYSVFMADGTKLRLSRNYRGKLKTLL 270 >UniRef50_B1I1G2 Response regulator receiver protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I1G2_DESAP Length = 249 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 83/245 (33%), Positives = 133/245 (54%), Gaps = 14/245 (5%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 +++ LIVDDE ARE LR L ++++GE ++A E + + + DV+FLDI+MP I Sbjct: 2 LLRTLIVDDEYPAREELRYLLGRCGSVQVIGEAADAQEALKLIKAVAYDVIFLDIRMPGI 61 Query: 61 SGLEMVGMLD-PEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 SG+ + L ++ P +VF+TA++EYA+ AF A DYL+KP+ E RL + +ARL++ Sbjct: 62 SGIGLARELRTQKNAPVVVFVTAYEEYALDAFGVGAVDYLIKPVTEKRLSEVIARLKER- 120 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 PE + + T I + +++ + + V V + G+ TL Sbjct: 121 ------FRPEKDKPFAAVAITRRGNIVPVPTQEITHIYAESDRVIVCTA-GERASAPYTL 173 Query: 180 RTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN--GLTVPVSRRYLKSLK 234 L R P R HR ++VNL ++EI+ + NG L + + VPVSR + +LK Sbjct: 174 EELARRLPQDIFFRSHRSFIVNLKFIKEIKPDLNGTYVLQINDRQNSEVPVSRSRVSALK 233 Query: 235 EAIGL 239 E +GL Sbjct: 234 ERLGL 238 >UniRef50_B4CWB7 Two component transcriptional regulator, LytTR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWB7_9BACT Length = 250 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 74/247 (29%), Positives = 128/247 (51%), Gaps = 12/247 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+VL+VDDE + R LR L+ + D++++GEC++ +E + + DVLFLDI MP + Sbjct: 4 IRVLLVDDERIGRHRLRQLLEREPDMKVIGECADGLEALAFLQAQPADVLFLDINMPGMD 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E++ L+ + P +VF+TA+D++A++AFE A DYLLKP RL K L R+R+ + Sbjct: 64 GFELLDRLEQKPEPLVVFVTAYDDHAVRAFEACALDYLLKPFSPERLAKALLRVRERMNA 123 Query: 122 QDVSLLPENQQA-------LKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF 174 +++ ++ R+ + + +V + + GK Sbjct: 124 RELESESPHRATESAALSESPRFVVRSGGRVAFVDAGQIDWVEAAGNYAIFHVG-GKNHM 182 Query: 175 TELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLK 231 T+ LE++ P +R R +VNL ++ + G +L NG VPV+R ++ Sbjct: 183 IRETMSALEAQLPPERFMRMSRSAIVNLTRIKALETSPGGGDCAVLSNGQRVPVTRS-IR 241 Query: 232 SLKEAIG 238 + E +G Sbjct: 242 EIAERVG 248 >UniRef50_Q1IUM5 Transcriptional regulator, LytR/AlgR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IUM5_ACIBL Length = 317 Score = 242 bits (619), Expect = 6e-63, Method: Composition-based stats. Identities = 72/247 (29%), Positives = 135/247 (54%), Gaps = 15/247 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ +IV+DEPLA L+ L + I ++G +N E + + KL+P+V+FLD+Q+P S Sbjct: 63 LRAVIVEDEPLATMKLKKLLDGEPGIRVMGHAANIDEAVAQIRKLQPNVIFLDVQLPGGS 122 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR----- 116 G E++ L +RP I+F TA+D+YAIKAF+ HA DYLLKP D+ RL + + + R Sbjct: 123 GFEVLDRLPEANRPCIIFTTAYDQYAIKAFDLHAADYLLKPFDQERLHRAIEKARVQAAG 182 Query: 117 -------QERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHE 169 Q +K +L + + + R+ L+ ++ ++ + + V++ Sbjct: 183 PVDKEWTQRLAKLIETLPKNGRNPEERLVFKSGGRVLFLEQDEIEWIEAASNYVHIHCGG 242 Query: 170 GKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVS 226 T+R +E+R +R HR +VN+ ++E++ ++G+ +++++G + S Sbjct: 243 NVVHSVRNTIRDVETRLNPLKFIRVHRSIIVNVNRIKELQPCNSGEHVVVMKSGKELSCS 302 Query: 227 RRYLKSL 233 R Y ++ Sbjct: 303 RTYRMAI 309 >UniRef50_C7MLP3 Response regulator of the LytR/AlgR family n=8 Tax=Coriobacteriaceae RepID=C7MLP3_CRYCD Length = 238 Score = 242 bits (619), Expect = 6e-63, Method: Composition-based stats. Identities = 88/243 (36%), Positives = 135/243 (55%), Gaps = 12/243 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K +IVDDE AR L+ L E E+V E ++ E I + + DV+FLDI MP S Sbjct: 3 LKAIIVDDEAPARSELKFLLDELGQTEVVAEAASVREAIEKLKEYPCDVMFLDINMPEAS 62 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GL++ L ++ P +VF+TA+ E+AI+AF+ +A DYL+KP++ RL + LAR+R+ S Sbjct: 63 GLQLAEALQHLKYPPAVVFVTAYSEFAIEAFKVNAIDYLVKPVESERLSQALARVREHVS 122 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 L Q L+ IP + L+ + + +V +R Y+ + + F+ ++L Sbjct: 123 ------LHAKVQKLERIPVEKGGKKILIGIDTIRYVMARDDYTYLQT-DNDRYFSTVSLA 175 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKSLKEA 236 LE R R HR YLVNL+ + E+ G L L + VPVSRR + SLK+A Sbjct: 176 QLEKRLDGHGFFRVHRGYLVNLSLVCEVEPVSGGTLLLTLDSCEDKVPVSRRRVSSLKKA 235 Query: 237 IGL 239 +G+ Sbjct: 236 LGI 238 >UniRef50_A1TXX0 Response regulator receiver protein n=3 Tax=Marinobacter RepID=A1TXX0_MARAV Length = 252 Score = 242 bits (619), Expect = 7e-63, Method: Composition-based stats. Identities = 81/239 (33%), Positives = 124/239 (51%), Gaps = 5/239 (2%) Query: 3 KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 +VLI DDEPLAR+ ++ L+ D + GE + + + V +L PD+L LDI+MP + G Sbjct: 8 RVLIADDEPLARQRIQRLLEALPDYRVCGEAVDGNDTLRKVAELEPDILLLDIRMPGMDG 67 Query: 63 LEMVGMLDPEH-RPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 +E L H P ++F TA+D YAI+AFE A YLLKP+ L LAR + Sbjct: 68 MEAADQLSKLHNPPAVIFCTAYDHYAIQAFEVRAVAYLLKPVRREALADALARAGKLNRV 127 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 Q +L + H L+ + D+ + + V + G E + TL+ Sbjct: 128 QRQALAQSTDAGNDQLAVRTHRGTELIDLSDLYYCEADQKYVTLHHRHG-ETVCDYTLKE 186 Query: 182 LESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT-VPVSRRYLKSLKEAI 237 LE P LLR HR LV + +Q +R +GQ +L L+ T +PVSRR+ ++++ + Sbjct: 187 LEQAYPDHLLRVHRHTLVGVRFIQGLRRSSDGQNQLALKGNATLLPVSRRHASTVRQWL 245 >UniRef50_Q21NI5 Response regulator receiver n=2 Tax=Alteromonadales RepID=Q21NI5_SACD2 Length = 265 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 75/256 (29%), Positives = 131/256 (51%), Gaps = 21/256 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ +IV+DEP+A ++ LQ IEIVGE N + + + ++PD++FLDIQMP ++ Sbjct: 9 LRTVIVEDEPIAMLQMKSMLQGCPTIEIVGEARNGKQALDVIQDVQPDLVFLDIQMPVLT 68 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E++ L + P IVF TA++EYA++AF+ HA DYLLKP E RL K LAR+ + Sbjct: 69 GFEVLKALQGDTLPLIVFTTAYEEYAVQAFDLHAVDYLLKPFSEERLNKALARVMERWQL 128 Query: 122 QDVSLLPENQQALKFI-----------------PCTGHSRIYLLQMKDVAFVSSRMSGVY 164 + QA++FI + L+ ++ +V + + Sbjct: 129 AEEDQKGTLLQAVEFILNKGEGPSVSAGAEPKLAIKESGEVLLIPQTEIDWVDAAGDYMC 188 Query: 165 VTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL 221 + S G+ T++ L + R HR +VN+ + ++ G++ L+L G Sbjct: 189 IHSK-GQTHIQRCTMKQLLEKLDSRRFCRIHRSTVVNVDRITKVIPHTKGESFLMLDCGE 247 Query: 222 TVPVSRRYLKSLKEAI 237 + VSR +++++ + Sbjct: 248 KLKVSRNCREAIQQFL 263 >UniRef50_B8JGA2 Two component transcriptional regulator, LytTR family n=5 Tax=Proteobacteria RepID=B8JGA2_ANAD2 Length = 239 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 105/242 (43%), Positives = 145/242 (59%), Gaps = 6/242 (2%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M++ +IVDDEP AR LR LQ ++EI +C NAVE + AV + RPDVLFLD+QMP + Sbjct: 1 MMRAVIVDDEPNARAELRALLQATGEVEIAADCGNAVEALQAVRRERPDVLFLDVQMPVV 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G E++GMLDP+ P +VF+TA D +A++AFEE A DYLLKP+ + R Sbjct: 61 DGFELLGMLDPDDLPAVVFVTAHDAFALRAFEESAADYLLKPVAPD--RLRRSLERLRAR 118 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 P L +PC + L+ + ++ V S +GV+V + +G E FTELTL+ Sbjct: 119 AGVARAAPPLAPPLTRVPCLAGRAVKLVPLAEIELVRSGPAGVHVVTAQG-ELFTELTLK 177 Query: 181 TLESRTPLLRCHRQYLVNLAHLQEIRLEDN---GQAELILRNGLTVPVSRRYLKSLKEAI 237 LE R LLRCH+Q+LVN + EIR D G A + R G VPVSRR+L ++ + Sbjct: 178 VLEERGGLLRCHKQHLVNADRVDEIRPGDASDPGAAVIRTRGGHDVPVSRRHLAQVRARL 237 Query: 238 GL 239 G+ Sbjct: 238 GI 239 >UniRef50_B1ZSR0 Two component transcriptional regulator, LytTR family n=9 Tax=Bacteria RepID=B1ZSR0_OPITP Length = 246 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 84/248 (33%), Positives = 134/248 (54%), Gaps = 12/248 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K L+VDDE LAR LR L D+EIVGE +N + + L PD++FLD+QMP S Sbjct: 1 MKALLVDDERLARNELRRLLGAFPDLEIVGEAANGRQARQLLATLTPDLMFLDVQMPGES 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+E++ L+P P ++F TAFDE+A+KAF+ +A DYLLKP+D ARL + RLR +R+ Sbjct: 61 GMELLESLEPPV-PDVIFTTAFDEFAVKAFDLNALDYLLKPVDPARLATAMERLRAKRAA 119 Query: 122 QDV----SLLPENQQAL---KFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF 174 + S N+ L + R + +++K + + S + V + + Sbjct: 120 AALPAGESGAKPNRAPLAAEDKVFVREGDRCWFVEVKSIRLLESEGNYTRVHFDQAQPQL 179 Query: 175 TELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLK 231 +L +E R R +R+ ++NLA + +I +G + L+ G V +SRR + Sbjct: 180 FR-SLNAMEERLDPKYFFRANRRQIINLAWIDKIEPWFSGGLLVHLKGGAKVELSRRQAQ 238 Query: 232 SLKEAIGL 239 +E + L Sbjct: 239 EFRERMSL 246 >UniRef50_B1ZMA5 Two component transcriptional regulator, LytTR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZMA5_OPITP Length = 268 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 82/250 (32%), Positives = 128/250 (51%), Gaps = 20/250 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ +IVDDEP AR +R+ L + +IE+VGE E + + + RP + FLD+QMP Sbjct: 16 IRTIIVDDEPAARRGVRLLLAQDPEIELVGEAGTGAEAVTLIERERPALAFLDVQMPGGD 75 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLAR----LRQ 117 G E + + P IVF+TA+DE+A++AFE +A DYLLKP D+AR L R +RQ Sbjct: 76 GFETLAQVGVAAAPVIVFVTAYDEHALRAFEVNAIDYLLKPYDDARFRAALERAKGAVRQ 135 Query: 118 ERSKQDVSLLPENQQALK----------FIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTS 167 R + + + + + L + I L+ ++ ++ + G YV Sbjct: 136 RRGEAESARWHQLVRELATARRSAAASGRVVVKTAGEILFLKPDEIDWIEAE--GDYVKF 193 Query: 168 HEGKE-GFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTV 223 H G T+ LE+R +R HR +VNL LQ++ G+ +ILR+G + Sbjct: 194 HAGSRGYLMRETMTQLEARLDPQQFVRIHRSAIVNLDRLQKLSPSFAGEYAVILRDGTKL 253 Query: 224 PVSRRYLKSL 233 +SR Y + Sbjct: 254 KLSRGYHARI 263 >UniRef50_B9M2N5 Two component transcriptional regulator, LytTR family n=3 Tax=Geobacter RepID=B9M2N5_GEOSF Length = 251 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 81/250 (32%), Positives = 122/250 (48%), Gaps = 13/250 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IK IVDDE ARE LR LQ+ + +VGE + + + + P++LFLDI MP IS Sbjct: 3 IKAFIVDDETPAREELRYLLQQMEGVVVVGEAGSGSTALAGIREANPELLFLDIHMPGIS 62 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+E+ +L P ++F TAF+ YA +AFE A DYLLKP R+ K +++ + Sbjct: 63 GIELAQLLAELPTHPLVIFATAFENYACEAFEVEAVDYLLKPFTLERVAKAVSKAARLMG 122 Query: 121 KQDV--SLLPENQQALK----FIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF 174 + + P + +P RI + + F + V+V + + Sbjct: 123 SKLAPGDVTPTAGDGHEGCTGKLPLYQGERIIPTSPERIVFAQADEGAVHVHTATDR-YR 181 Query: 175 TELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELIL--RNGLTVPVSRRY 229 + TL LES+ +R HR +LVN H+ E NG L + RN + VSR + Sbjct: 182 SRSTLTELESKLARHGFVRVHRSFLVNTNHVLEAIPWFNGSFRLTMDDRNRTEIMVSRYH 241 Query: 230 LKSLKEAIGL 239 K LK ++ L Sbjct: 242 AKDLKRSLDL 251 >UniRef50_C7PM85 Two component transcriptional regulator, LytTR family n=3 Tax=Sphingobacteriales RepID=C7PM85_CHIPD Length = 246 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 79/249 (31%), Positives = 139/249 (55%), Gaps = 13/249 (5%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MIK +I+DDEPLARE ++ +LQ S I+++ EC + EG+ A+ + +PD++FLD+QMP+I Sbjct: 1 MIKAVIIDDEPLAREIVKEYLQSFSQIQLMQECGDGFEGLKAIQQQQPDIIFLDVQMPKI 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G EM+ ++ E P ++F TAF+E+AI+AFE +A DYLLKP + R +K +++ R Sbjct: 61 NGFEMLELV--ESLPAVIFTTAFEEHAIRAFEVNAIDYLLKPFSKERFDKAVSKWLDRRV 118 Query: 121 KQDVSLLP-------ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 ++ + + + +I ++ ++D+ ++ + V + + EG Sbjct: 119 ADEMQQTAALLDTAGASPMQSNRVVVKINGKIKIIPVQDIHYLEAADDYVKIVTPEG-TF 177 Query: 174 FTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYL 230 T++ E R HR Y++N+ + I + IL++G VPVS+ Sbjct: 178 LKNKTMQFFEKSLDPQQFARVHRSYMLNVNQVTRIEPYEKENHLAILKSGAKVPVSKTGY 237 Query: 231 KSLKEAIGL 239 LK ++GL Sbjct: 238 PRLKASLGL 246 >UniRef50_B1ZQK1 Two component transcriptional regulator, LytTR family n=2 Tax=Opitutus terrae PB90-1 RepID=B1ZQK1_OPITP Length = 255 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 75/247 (30%), Positives = 129/247 (52%), Gaps = 12/247 (4%) Query: 3 KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 + LIVDDEPLARE L+ LQ Q+ +E+ GEC + + + + + RPD++FLD+QMP SG Sbjct: 5 RALIVDDEPLARERLQRLLQRQNTVELAGECGDGPDALATIERERPDIVFLDVQMPGCSG 64 Query: 63 LEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLAR-------- 114 L++ L RP I+F+TA + +A++AF A DYLLKP DE RL + + R Sbjct: 65 LDVANQLPATARPAIIFVTAHERFAVEAFAARAVDYLLKPFDEERLHQAVERALELLQSR 124 Query: 115 -LRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 R+ ++ + L + + I RI ++ ++V ++ + + + + Sbjct: 125 QAREVETRLESILAQVQPRVPERIAVRVDGRIVFVKPREVVWIEAANNYCVLHLTDAPRL 184 Query: 174 FTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYL 230 +L ++E R R R +V ++E+ + G+ ++L NG +P+SR Sbjct: 185 MLRESLGSVEQRLGAANFARISRSAVVRSDQIKELESANYGEYVVVLLNGTRLPLSRYRR 244 Query: 231 KSLKEAI 237 L+ A+ Sbjct: 245 NELERAL 251 >UniRef50_Q0A576 Response regulator receiver protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A576_ALHEH Length = 243 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 80/239 (33%), Positives = 125/239 (52%), Gaps = 5/239 (2%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++VL+VDDEP AR L + + +V E + + A + +PD++ LDIQMP + Sbjct: 1 MRVLVVDDEPWARRRLAEMVDAEQGHRVVAEAGTGEQALAATREHQPDLILLDIQMPGMD 60 Query: 62 GLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GLE+ + E P ++F+TA E+A+ AFE A DYLLKP+ RL LAR Q Sbjct: 61 GLEVARRIARRERPPGVIFITAHPEHALAAFEAKASDYLLKPVRPDRLRAALARAGQVNR 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 Q L + + C L+ + + + + V V H+ E E +L+ Sbjct: 121 AQLQGLRRPHADP-GMLRCRTTRGERLVPLDRIHSLRAEDKYV-VVGHDDGELLLEDSLK 178 Query: 181 TLESR--TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 LE R LR HR LV L LQ + + G+ +++L+ GL +PVSRR+L ++++A+ Sbjct: 179 ALEQRFADRFLRVHRSALVALDRLQALERDALGRHQVVLQGGLRLPVSRRHLPAVRDAL 237 >UniRef50_Q2S4J5 Response regulator n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S4J5_SALRD Length = 248 Score = 239 bits (612), Expect = 4e-62, Method: Composition-based stats. Identities = 70/250 (28%), Positives = 126/250 (50%), Gaps = 17/250 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ LIVDDEP AR ++ +L+E IE+ GEC I A+++ PD++FLD+QMP + Sbjct: 1 MRALIVDDEPPARSLIQEYLEEIGRIEVTGECGTGRAAIEAINETAPDLVFLDVQMPGLD 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G +++ + + P I+F TA+DEYAI+AFE A DYLLKP AR + + R + + Sbjct: 61 GFDVLERI--DTLPDIIFSTAYDEYAIEAFEAGAVDYLLKPYTRARFQTAVERALERHDR 118 Query: 122 QDVSLL-----------PENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEG 170 D + E + + + +I + D+ +V + + + + Sbjct: 119 DDDAYADQLATLLQEAKAETDDSPERLYVRHGDKIIPVDPDDIRWVEAAGDYSKLHT-DE 177 Query: 171 KEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSR 227 + + + LE R +R HR +++ + + + +G + +L +G TV VSR Sbjct: 178 TTYLSSMGIGALEDRLAPTRFMRVHRSHILAFPAIDYLYSDGSGGYKAVLDDGTTVRVSR 237 Query: 228 RYLKSLKEAI 237 Y +++ + Sbjct: 238 SYAPEIRDRL 247 >UniRef50_Q0HP79 Response regulator receiver protein n=20 Tax=Bacteria RepID=Q0HP79_SHESM Length = 243 Score = 239 bits (612), Expect = 5e-62, Method: Composition-based stats. Identities = 77/244 (31%), Positives = 124/244 (50%), Gaps = 6/244 (2%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+K +IV+DE LARE L ++ S+I+IV + +E + DV+FLDIQ+P I Sbjct: 1 MLKAIIVEDEYLAREELEYLVKSHSEIDIVASFEDGLEAFKYLQDHEVDVVFLDIQIPSI 60 Query: 61 SGLEMVGMLDPE-HRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 GL + L H P++VF+TA E+A++AFE AFDY+LKP +E R+ L ++ Q Sbjct: 61 DGLLLAKNLHKSTHPPHVVFVTAHKEFAVEAFELEAFDYILKPYNEPRIISLLQKIEQVG 120 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 + A + + RI + + + + + YV + + ++T+ Sbjct: 121 RQAPKPQHEAASNASRTVNLVKGERIIVTPCEQIYYAEADEKLTYVYTRTDR-YVMQMTI 179 Query: 180 RTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKSLKE 235 SR P RCHR Y VN+ ++EI N + L + VPVSR +K+ ++ Sbjct: 180 SEFVSRLPAEGFFRCHRSYCVNINKIREIVPWFNSTYLIRLHDLSFEVPVSRSNIKAFRQ 239 Query: 236 AIGL 239 + L Sbjct: 240 LMRL 243 >UniRef50_C6XTW9 LytTr DNA-binding region n=3 Tax=Sphingobacteriales RepID=C6XTW9_PEDHD Length = 245 Score = 239 bits (612), Expect = 5e-62, Method: Composition-based stats. Identities = 84/248 (33%), Positives = 145/248 (58%), Gaps = 12/248 (4%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI+ +++DDEPLAR+ ++ +L+ ++E+V ECS+ EGI A+ +PD +FLDIQMP+I Sbjct: 1 MIRTILIDDEPLARDVVKHYLKLFPEVEVVAECSDGFEGIKAIAHHQPDFIFLDIQMPKI 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL----- 115 SG EM+ ++ E P ++F TAFDEYAIKAFE +A DYLLKPI++ R E+ + +L Sbjct: 61 SGFEMLELV--EKHPAVIFTTAFDEYAIKAFEVNAVDYLLKPIEQNRFEQAMQKLPGRLH 118 Query: 116 -RQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF 174 +K+ + + + + + I ++ + D+ ++ + V +++ EG Sbjct: 119 NTDAVTKELLDVAALSPAQHNRVVVKKNGVIKIIAVSDIHYLEADDDYVKLSTAEGIYH- 177 Query: 175 TELTLRTLE---SRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLK 231 T+ E +R HR Y++NLA + I L++ ++L++ + +PVS+ Sbjct: 178 KNKTMNFFERTLEPGQFIRIHRSYIINLAQVTRIELKEKDSYVVLLKSDIWLPVSKTGYV 237 Query: 232 SLKEAIGL 239 LK A+G+ Sbjct: 238 KLKAALGM 245 >UniRef50_A1HLU8 Response regulator receiver protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HLU8_9FIRM Length = 249 Score = 239 bits (612), Expect = 5e-62, Method: Composition-based stats. Identities = 84/245 (34%), Positives = 137/245 (55%), Gaps = 9/245 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +KVLIVDDE + L+ L+EQ E+VG C N + + V ++PD +FLD++MP +S Sbjct: 3 LKVLIVDDEEIMCRELKYLLEEQGAAEVVGVCYNGEDALAMVGSVKPDAVFLDVRMPGLS 62 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GLE+ L + P++VF+TAF E+A++AFE +A Y+LKP DE +EK + RL + R Sbjct: 63 GLEVARRLSSLKDPPHVVFITAFSEFAVEAFEVNALHYILKPFDEQDIEKVIERLMRRRH 122 Query: 121 KQ---DVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL 177 + +LP+ Q L+ + G R+ ++ ++ + + ++ VY+ + +G + + Sbjct: 123 AASGVEPEMLPKAPQHLRKLCVEGRDRLEVIDVERIQVIFAKNRMVYIQTVDGTKYAAKH 182 Query: 178 TLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL--TVPVSRRYLKS 232 TL+ E RCHR Y+VN+ ++++ + L L VPV R Y K Sbjct: 183 TLQEYEEILDSRQFFRCHRNYIVNVDRIKQLATWFHRGYMLTLEGKEEVEVPVGRIYAKK 242 Query: 233 LKEAI 237 LKE I Sbjct: 243 LKEYI 247 >UniRef50_Q2S053 LytTr DNA-binding domain family n=2 Tax=Rhodothermaceae RepID=Q2S053_SALRD Length = 278 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 80/261 (30%), Positives = 137/261 (52%), Gaps = 24/261 (9%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ LIVDDEPLARE L L + + + G + E + A+H+ PD++FLD+QMP ++ Sbjct: 8 IRALIVDDEPLARERLHELLTDAPAVTVAGTAEDGFEAVDAIHEQAPDLVFLDVQMPGMN 67 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE--- 118 G++++ + P VF+TA+D+YAIKAF+ A DYLLKP D+ R E+ L R R++ Sbjct: 68 GIDVIEEIGTADMPVTVFVTAYDQYAIKAFDLAAVDYLLKPFDDERFEEALRRAREQIAN 127 Query: 119 -------------RSKQDVSLLPE----NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMS 161 ++D SLL + ++ L+ I G + ++ + D+ +++ S Sbjct: 128 REGEAISDRLLRLLQERDPSLLEKESARDEPYLERIAVQGRGKARIVPVDDLTHITADGS 187 Query: 162 GVYVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILR 218 + + + ++TL +R +R HR +V L ++ I G + LR Sbjct: 188 YAELHTGDD-TYVIRERMKTLAARLDPDTFVRVHRSAIVRLDEIELILRGGGGNYAVRLR 246 Query: 219 NGLTVPVSRRYLKSLKEAIGL 239 +G V VSR + L++ +G+ Sbjct: 247 DGTRVSVSRSRVDELQDRLGV 267 >UniRef50_C7R6S4 Two component transcriptional regulator, LytTR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6S4_KANKD Length = 234 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 81/240 (33%), Positives = 131/240 (54%), Gaps = 14/240 (5%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI VLIVDDE AR+ LR L SD+EIVGE N + + ++ L+PD++FLDI MP + Sbjct: 1 MISVLIVDDEQPARQRLRRLLDSHSDLEIVGEAENGQQALDLINSLQPDLIFLDISMPVM 60 Query: 61 SGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +G+++ L+ + +P+I+F TA+DEYA++AF+ A DYLLKPI RL K L +L+++ Sbjct: 61 NGMQVAKQLNQNDPQPHIIFTTAYDEYALQAFDVDAQDYLLKPIRHERLSKALQKLQRQL 120 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 Q ++ + + ++++ F+ S V + + + +L Sbjct: 121 ----------TQTKTAYLSIRERETVRRVAVEEILFLHSDQKYTEVHLAK-EVLLSSESL 169 Query: 180 RTLESR--TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 + LE R +R HR LVN HL I +D+G LI +SRR+ +++ + Sbjct: 170 KDLEQRFSHDFIRIHRSTLVNRQHLIGIEQDDSGCLALIQDAKTKPEISRRHQPDVRQFL 229 >UniRef50_Q1ILF8 Transcriptional regulator, LytR/AlgR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1ILF8_ACIBL Length = 258 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 80/252 (31%), Positives = 132/252 (52%), Gaps = 18/252 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ LIVDDEPLAR + LQ +I+GEC N + + +L+PD++FLD+QMP++ Sbjct: 3 IRTLIVDDEPLARRRILSLLQPDPSFDILGECGNGKDAADKICELKPDLVFLDVQMPKLD 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ---- 117 G ++ + H P I+F+TAFD+YA+KAF+ HA DYLLKP + R + R + Sbjct: 63 GFGVLEAVATTHLPQIIFVTAFDQYAVKAFDAHAVDYLLKPFKQERFMDAVLRAKAQFQQ 122 Query: 118 ----------ERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTS 167 E + + +SLL + ++ L+ +V ++ + + + + S Sbjct: 123 AAAPVNGNAPEENNKLLSLLRHVNTDSDRLVVRSGGKVVFLRASEVEWIEAAANYIKLYS 182 Query: 168 HEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVP 224 + + + +LE P +R HR +VNL+ +QEI+ G+ +ILRNG +P Sbjct: 183 -QQRVFTVREKISSLEEALPNGKFMRIHRSVIVNLSMVQEIQPCGGGEFVVILRNGRELP 241 Query: 225 VSRRYLKSLKEA 236 + R Y + E Sbjct: 242 LGRTYRSKIDEL 253 >UniRef50_C6W416 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W416_DYAFD Length = 257 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 84/251 (33%), Positives = 138/251 (54%), Gaps = 15/251 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + LI+DDE LAR+ +R F+Q IEI E +N E + + + RPDV+FLDIQMP + Sbjct: 3 YRCLIIDDEVLARDVIRTFVQHDHSIEITDEAANGSEAVVKILQHRPDVVFLDIQMPELD 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G ++ + P H+P++VF TAFD+YA++AFE +A DYLLKP DE R ++L RL++ S+ Sbjct: 63 GFAVLREVWPHHQPFVVFTTAFDQYALRAFEVNAIDYLLKPFDEIRFHQSLGRLKERLSQ 122 Query: 122 QDVSLLPE------------NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHE 169 + + E + L+ + ++YL++ D+ S+ + + V + + Sbjct: 123 KSQPRIEELVNNLLREQKDKEENYLQRLLVKEAGKMYLVKTDDITHFSADGNYISVYTLQ 182 Query: 170 GKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVS 226 K +L +LESR ++R R +VN+ + E+ NG+ + L G V + Sbjct: 183 KKVYTVYESLGSLESRLDPAVMIRVGRSNIVNMNFISELETYFNGEYIIHLSTGEKVKWT 242 Query: 227 RRYLKSLKEAI 237 R Y ++K I Sbjct: 243 RGYRDNIKAFI 253 >UniRef50_C1F8Y7 Response regulators of cell autolysis n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F8Y7_ACIC5 Length = 274 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 78/272 (28%), Positives = 127/272 (46%), Gaps = 34/272 (12%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I +IVDDE LARE L+ L+ DI+I+ + +N +E + +H PD++FLD+QMP + Sbjct: 3 ITAVIVDDEQLAREELQYLLEGAGDIDILAQGTNGIEAVDLIHGHHPDLVFLDVQMPGLD 62 Query: 62 GLEMVGML----DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ 117 G ++ L + P I+F TAFD+YA++AF+ +A DYLLKP D R+ + + R R+ Sbjct: 63 GFAVLKKLLDSGSGQPLPQIIFATAFDQYAVRAFDVNAIDYLLKPFDRDRVLQAVERARK 122 Query: 118 ERSKQD-------------------------VSLLPENQQALKFIPCTGHSRIYLLQMKD 152 + + P +Q I +R+ L+ D Sbjct: 123 RLEENAPNGERPSGSQATPGTDPRLDTLLRLIEQGPAGRQPRGKIVIQAQNRLLLVDQSD 182 Query: 153 VAFVSSRMSGVYVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLED 209 + F S + V + + TL L + R HR Y+VN+ H++E+ Sbjct: 183 LCFASIDEGTITVATAAFEGQSRCRTLEELLEQLDPNLFWRAHRSYVVNINHIKEVVPWF 242 Query: 210 NGQAELILRNG--LTVPVSRRYLKSLKEAIGL 239 +L + + +PVSR + L+E L Sbjct: 243 KSSYQLRMGDRKHTEIPVSRAQTRRLRELFNL 274 >UniRef50_B1ZZB5 Two component transcriptional regulator, LytTR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZZB5_OPITP Length = 268 Score = 236 bits (604), Expect = 4e-61, Method: Composition-based stats. Identities = 83/263 (31%), Positives = 134/263 (50%), Gaps = 27/263 (10%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++VLIVDDEPLAR +R +L ++ EIVGEC N V + + + R DVLFLD+QMP + Sbjct: 3 VRVLIVDDEPLARSVIRHWLADKRGAEIVGECGNGVAALELLRQQRVDVLFLDVQMPEMD 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR----- 116 G ++ P ++F+TA+D+YA++AF HA DYLLKP D+ R + R R Sbjct: 63 GFALLRRARAIEIPVVIFVTAYDKYALQAFAAHALDYLLKPFDKERFDHAFKRARLALEQ 122 Query: 117 ---------QERSKQDVSLLPENQQAL---------KFIPCTGHSRIYLLQMKDVAFVSS 158 + R+ D LP ++A + +I L++ DV ++ + Sbjct: 123 VRAAGEYRTRVRALLDTLELPVGEEARAQDRQLVFSSRLALRQDGKIVLVRTSDVHWLEA 182 Query: 159 RMSGVYVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAEL 215 V + + E + TL L ++ +R HR +VN+ ++E+ NG+ E+ Sbjct: 183 EGDYVRIHTRE-RRHLLHDTLSHLATQLDPRLFVRVHRSAVVNVECIRELEPSSNGEFEI 241 Query: 216 ILRNGLTVPVSRRYLKSLKEAIG 238 +L +G + SR + L A+G Sbjct: 242 VLVDGRRLHSSRTHRDDLLAALG 264 >UniRef50_C0ZI44 Two-component response regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZI44_BREBN Length = 260 Score = 235 bits (601), Expect = 8e-61, Method: Composition-based stats. Identities = 86/261 (32%), Positives = 140/261 (53%), Gaps = 23/261 (8%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+KV IVDDE ARE LR L++ S++ +VGE + E + AV + PD +FLDI + Sbjct: 1 MLKVFIVDDETPAREELRYLLEQFSEVSVVGEAGSGEEALEAVLQTEPDAVFLDIHLQDR 60 Query: 61 SGLEMVGMLDPE--HRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE 118 G+++ L + P I+F +A++ +A++AFE A DY++KP E RLEKT+ R+R+ Sbjct: 61 DGVDVGQELLESMVNPPVIIFASAYEFHAVRAFEAEAVDYIVKPFSEMRLEKTMNRVRKM 120 Query: 119 RSKQDVS-----LLPENQQAL----------KFIPCTGHSRIYLLQMKDVAFVSSRMSGV 163 R K + + LL E Q+L +P + +I L+ ++ + + Sbjct: 121 RRKSEPALDASPLLEERLQSLLQNVLVDTQPHRVPVEKNGKIMLIDPNEIVYATLEGRYA 180 Query: 164 YVTSHEGKEGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN- 219 + + G++ T TL+ LESR R HR ++VNL+ E+ G L++++ Sbjct: 181 SIYTA-GEQYATTFTLQELESRLSRQQFFRTHRAFIVNLSKTAELVPWFKGSIHLVMQDQ 239 Query: 220 -GLTVPVSRRYLKSLKEAIGL 239 VPVSR +K LK+ +G Sbjct: 240 RKTEVPVSRNVVKELKKRLGF 260 >UniRef50_B7R6J5 LytTr DNA-binding domain family protein n=2 Tax=Thermoanaerobacteraceae RepID=B7R6J5_9THEO Length = 248 Score = 235 bits (601), Expect = 8e-61, Method: Composition-based stats. Identities = 85/247 (34%), Positives = 135/247 (54%), Gaps = 18/247 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ LI++DE ARE L+ LQE DIE+VGE N + G+ + KL+PDV+FLDI +P+I Sbjct: 7 LRALIIEDEQPAREELKYLLQEYEDIEVVGEADNGITGLHLIEKLKPDVIFLDINIPKIH 66 Query: 62 GLEMVGML----DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ 117 G E+ + + P++VF+TA+D +AI AFE DYLLKPI RL KTL ++R Sbjct: 67 GCELARHISAVSEIGKPPFVVFVTAYDIHAIDAFEIGVVDYLLKPISHHRLYKTLEKIR- 125 Query: 118 ERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL 177 SL E + + + + RI LL ++++ F + V + + + + Sbjct: 126 -------SLYKETEIPIGKLAVEKNERIKLLDLEEIVFAEAHEGNVLINTKN-ETFIYKG 177 Query: 178 TLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT--VPVSRRYLKS 232 T+++LE + R + Y+VNL + EI G L++ + +PVS+ +K Sbjct: 178 TIKSLEEKLKDRGFFRVQKSYIVNLNKIAEILPWFKGTYWLVMEDNKKTQIPVSKSQIKE 237 Query: 233 LKEAIGL 239 LK +GL Sbjct: 238 LKALLGL 244 >UniRef50_Q1D286 DNA-binding response regulator n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D286_MYXXD Length = 256 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 81/255 (31%), Positives = 129/255 (50%), Gaps = 17/255 (6%) Query: 1 MIK--VLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMP 58 M + VL+ DDE AR ++ L E + + GE ++ + + V LRPD+L LD+QMP Sbjct: 1 MTRFQVLVADDEAPARAKVKRLLAEDARFALAGEATDGPQTLRQVGTLRPDLLVLDVQMP 60 Query: 59 RISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE 118 ++G E++ L PEH P ++F TA+D +A+ AFE A DYLLKP D R + L + Sbjct: 61 GLTGFEVLEALGPEHCPAVIFSTAYDAFALAAFEAQAVDYLLKPYDAERFGRALDKAHAV 120 Query: 119 R------SKQDVSLLPE-----NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTS 167 + + SLL E + L+ + L + DV +S+ V + + Sbjct: 121 LRSGMPDTARIQSLLAELGRAPAGRPLERLVVKVGEAWVPLPLADVWHLSAEDKYVRLYT 180 Query: 168 HEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVP 224 +G E TLR LE R +R HR +VNL + + +G L+L++G +V Sbjct: 181 GQG-EHLVRQTLRALEERLDPSRFVRVHRGDIVNLDAVARLEPWSHGDGILVLKDGSSVV 239 Query: 225 VSRRYLKSLKEAIGL 239 +SR + ++ + GL Sbjct: 240 LSRTWREAFLQKWGL 254 >UniRef50_D0XXI4 Two component transcriptional regulator, LytTR family n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XXI4_9CAUL Length = 262 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 76/246 (30%), Positives = 133/246 (54%), Gaps = 9/246 (3%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MIK LIVDDEPLAR ++ L+ +SD E+VGE ++ I + +PDV+FLD+QMP + Sbjct: 1 MIKTLIVDDEPLARRHIAALLRARSDFEVVGEAAHGASAIAQIEAAKPDVVFLDVQMPEV 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G ++V + E P VF+TA D +A++AFE A DYLLKP + R + L R+R+ + Sbjct: 61 TGFDVVEAIGVEAMPMTVFVTAHDAFAVRAFEVQAIDYLLKPFGDDRFAQVLDRVRRRLA 120 Query: 121 KQ-----DVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFT 175 ++ L + + G+ ++ ++DV ++ + + V + + Sbjct: 121 AGHGGADALATLLASAPRTPRLVARGNGVARIIPLEDVQWIGAAGNYAEVHTA-SRSLLI 179 Query: 176 ELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKS 232 + ++ +L +R P R HR +V L + E+R +G L +G + +SRRY ++ Sbjct: 180 DESIASLAARLPAQDFARIHRAVIVRLDAIAEVRGGSHGDGAARLTSGAELRISRRYREA 239 Query: 233 LKEAIG 238 ++ + Sbjct: 240 VQTYLS 245 >UniRef50_Q814J1 Sensory transduction protein lytT n=81 Tax=Bacteria RepID=LYTT_BACCR Length = 246 Score = 234 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 84/247 (34%), Positives = 138/247 (55%), Gaps = 9/247 (3%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+KVL+VDDE LAR+ L+ L+ ++EI+GE + + + + RPD++FLDIQ+ Sbjct: 1 MLKVLVVDDEMLARDELKYLLERTKEVEIIGEADCVEDALEELMQSRPDIVFLDIQLSDD 60 Query: 61 SGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +G E+ +L ++ P IVF TA+D+YA++AFE A DY+LKP DE R+ +TL + ++++ Sbjct: 61 NGFEIANILKKMKNPPAIVFATAYDQYALQAFEVDALDYILKPFDEERIVQTLKKYKKQK 120 Query: 120 SKQDVSLLPENQQ----ALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFT 175 Q + + + I L+ ++D+ +V V V + + T Sbjct: 121 QSQIETKHEIKGTDVTVEMHKLALPIEESIVLVNIEDIVYVGLVDGKVTVKTMR-ETYVT 179 Query: 176 ELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKS 232 TL LE + P +R HR ++ N+ H+ EI+ N LI++ G VPVSR Y K Sbjct: 180 HDTLVILEKKLPQVSFMRVHRSFIANINHITEIQPWFNSTYNLIMKEGSKVPVSRTYAKE 239 Query: 233 LKEAIGL 239 LK+ + + Sbjct: 240 LKKLLRI 246 >UniRef50_Q5WAM2 Two-component response regulator n=2 Tax=Bacillus RepID=Q5WAM2_BACSK Length = 246 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 83/243 (34%), Positives = 130/243 (53%), Gaps = 9/243 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ L+ DDE +RE L L IE+VGE ++ E + L+PD+LFLDI+MP + Sbjct: 8 IRTLVADDEKYSREELLYLLGFFPQIEVVGEAASGHETAAKMMDLQPDLLFLDIEMPEMD 67 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G E+ + + P+IVF TA+ ++A++AF+ A YL+KPIDE RL +T+A++ + Sbjct: 68 GTEIAAIAKQMKQPPFIVFATAYPQFAVEAFQLQAKGYLIKPIDETRLAETIAQVEDMLA 127 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 ++ E + + G I+ L+ + +A+ V + G T LTL+ Sbjct: 128 ---LTAERERTKPPAKLAVEGDEAIHFLEPESIAYAYRDEKSTKVITATGA-YETRLTLK 183 Query: 181 TLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKSLKEA 236 LE+R R H+ YLVN A + E+ NG +L L+ +PVSR Y+K L+ Sbjct: 184 ELETRLAPYSFFRVHKSYLVNTACITEMNAWFNGAYQLKLKGIDDHIPVSRNYVKPLRSQ 243 Query: 237 IGL 239 I L Sbjct: 244 IEL 246 >UniRef50_A4J8Q7 Response regulator receiver protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J8Q7_DESRM Length = 236 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 80/244 (32%), Positives = 131/244 (53%), Gaps = 14/244 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++V++VDDE AR+ L L++ +DIE+ E + + + K RPD +FLDI MP Sbjct: 1 MRVVVVDDEAPARDELIYLLKQHADIEVAAEAEDVQSALQVIRKERPDAVFLDISMPDGE 60 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+E+ LD P +VF TA+D++A++AF +A DYLLKP E R+ +T+ +LR+ S Sbjct: 61 GMEVARQLDRWVEPPLVVFATAYDQHAVEAFTVNAVDYLLKPFSEERVAETIDKLRRLLS 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + Q K I + I LL +++ F S + V + + + K TL+ Sbjct: 121 ------HKKQNQLQKKIAVSDEDLIKLLNPEEIVFASRQGREVMIKTFD-KTYSVNYTLQ 173 Query: 181 TLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELIL--RNGLTVPVSRRYLKSLKE 235 LE+R P R H +LVN+ ++ I G +L++ + VPVSR +K ++ Sbjct: 174 ALENRLGDLPFFRPHYSFLVNIDKIERIEPGFQG-HQLVMQDEDSSRVPVSRNGMKEIRR 232 Query: 236 AIGL 239 +G+ Sbjct: 233 LLGI 236 >UniRef50_Q2SQ69 Alginate biosynthesis regulatory protein AlgR-like protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQ69_HAHCH Length = 246 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 82/244 (33%), Positives = 125/244 (51%), Gaps = 9/244 (3%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M KV+IVDDEPLARE L+ L + E+ E S E + + PD++ LDI+MP Sbjct: 1 MTKVIIVDDEPLARERLKRLLLDT-HYEVCAEASGGDEALERIRLHSPDIVLLDIRMPGK 59 Query: 61 SGLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 GLE+ L P ++F TA+DEYAI+AF A DYLLKPI L + L + Q Sbjct: 60 DGLEVAAELAQHPQPPAVIFTTAYDEYAIQAFRVRAQDYLLKPIRREDLMRALQNVTQVN 119 Query: 120 SKQDVSLLPE---NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTE 176 Q SL E +A + C + +++ D+ ++ + V V +G E ++ Sbjct: 120 RAQLQSLKQEINGQDEAPAVVVCRSSRGMERIKISDILYLQAEHKYVTVFHAQG-ETLSD 178 Query: 177 LTLRTLESRT--PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT-VPVSRRYLKSL 233 L+ LE LR HR L+N +++ ++ +G E+ LR +PVSRR + + Sbjct: 179 QPLKELEQALHPHFLRIHRNTLINRHYIEILQRRHDGHYEVRLRGVREALPVSRRLVTEV 238 Query: 234 KEAI 237 K+ + Sbjct: 239 KQFL 242 >UniRef50_C5RQ54 Two component transcriptional regulator, LytTR family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RQ54_CLOCL Length = 253 Score = 233 bits (595), Expect = 4e-60, Method: Composition-based stats. Identities = 85/253 (33%), Positives = 136/253 (53%), Gaps = 15/253 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++V++VDDE + NL+ +L ++ DIEI+G +++E I + +PD +FLDI MP I Sbjct: 1 MRVILVDDELASLNNLKYYLSKEEDIEIIGMYQDSLEAIKKIITDKPDAVFLDISMPEID 60 Query: 62 GLE-MVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL----- 115 GL +L + IVF+TA+D+YAIKAFE A DY+LKPID R++ T+ RL Sbjct: 61 GLSCAAEILSHDEEMKIVFVTAYDDYAIKAFELSAIDYILKPIDPQRIKATIKRLSKFSV 120 Query: 116 ----RQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGK 171 +++ K + + +P + RI+L ++D++F+ S V + + +GK Sbjct: 121 DQTTKEKFKKNQFIKEKAMKTNISKLPLWENDRIFLCDIEDISFIFSECGYVKINTCKGK 180 Query: 172 EGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG--LTVPVS 226 ++ TL E R RCH+ ++VN + EI N +LI+ + VS Sbjct: 181 TYTSKETLNYYEDRLNELSFFRCHKSFIVNTKKIAEIIPWFNSTFKLIMDGDSNSDITVS 240 Query: 227 RRYLKSLKEAIGL 239 R Y+ S K GL Sbjct: 241 RSYMTSFKSLFGL 253 >UniRef50_Q3AA03 DNA-binding response regulator n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AA03_CARHZ Length = 251 Score = 233 bits (595), Expect = 4e-60, Method: Composition-based stats. Identities = 82/250 (32%), Positives = 132/250 (52%), Gaps = 12/250 (4%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI ++VDDEPLARE L+ L+E +E++GE + E + +PDV+FLDI+M + Sbjct: 1 MITAVVVDDEPLAREELKYLLEETERVEVIGEADSGEELFEVLRDRKPDVVFLDIEMYGL 60 Query: 61 SGLEMV-GMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +GL++ +L + P IVF TA+D+YA+KAFE +A DYLLKP R++ TL ++ ++ Sbjct: 61 NGLDVALELLKEKDPPLIVFATAYDQYAVKAFELNALDYLLKPFSAERVKLTLEKIEEKL 120 Query: 120 S-----KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF 174 KQ + + + + +I L+ +++ FV ++ + K Sbjct: 121 RDKEIYKQKMWQSIQAIAPQQKVFIQTADKILPLKREEIYFVEAQGRYARLRLKN-KWVM 179 Query: 175 TELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG--LTVPVSRRY 229 +L LE ++ H+ +LVN ++EI G L + + VPV R + Sbjct: 180 CRHSLSELEDMLGEKNFVKVHKSFLVNFEQIKEIIPLFGGGLILRMGDDGASEVPVGRTF 239 Query: 230 LKSLKEAIGL 239 LKS KE IGL Sbjct: 240 LKSFKEKIGL 249 >UniRef50_B3E2Y5 Two component transcriptional regulator, LytTR family n=1 Tax=Geobacter lovleyi SZ RepID=B3E2Y5_GEOLS Length = 251 Score = 232 bits (593), Expect = 7e-60, Method: Composition-based stats. Identities = 77/245 (31%), Positives = 130/245 (53%), Gaps = 9/245 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I V ++DDE AR LR L++ ++EIVGE + A EG+ + +L+P +LFLDIQMP ++ Sbjct: 3 ITVFLIDDEAPARRELRYLLEQLPELEIVGEAATATEGLRLLRQLKPRLLFLDIQMPGLT 62 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+E+ +L RP +VF TA+ ++A+ AF AFDYLLKP+ RL KT+ ++R++ + Sbjct: 63 GIELSQILQELPERPLVVFSTAYSQFAVDAFNLEAFDYLLKPVTLERLGKTIDKVRKQLA 122 Query: 121 K----QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHE--GKEGF 174 + L K++ S+I + + + FV + ++ + + Sbjct: 123 ATPPGPERPLPEPPHDDRKWVAARQGSKILPIAPESIVFVRCTEAVTHIHTATRIYQTSH 182 Query: 175 TELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN--GLTVPVSRRYLKS 232 T L+ R HR LVNL + EI +G +L++ + + VSR + + Sbjct: 183 TITALQEQLEPYAFFRAHRNSLVNLNCILEIIPWFSGSCKLVMNDPARTEILVSRYHARD 242 Query: 233 LKEAI 237 LK+ + Sbjct: 243 LKKHL 247 >UniRef50_Q03GB5 Response regulator of the LytR/AlgR family n=7 Tax=Lactobacillaceae RepID=Q03GB5_PEDPA Length = 243 Score = 232 bits (592), Expect = 8e-60, Method: Composition-based stats. Identities = 79/243 (32%), Positives = 130/243 (53%), Gaps = 6/243 (2%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K+LIVDDEPLAR L L+ ++ V E E + +PD++FLDI++ + Sbjct: 1 MKILIVDDEPLARSELDFLLRNNPLVDSVSEAEGVTEAKQKLMTDQPDLMFLDIRLDDGN 60 Query: 62 GLEMVGMLDPEH--RPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 G+ L E RPYIVF TA+D+YA+ AF+ +A DY+LKP ++ R+++TL R+ Sbjct: 61 GMSFAKFLKKEEKLRPYIVFATAYDQYALDAFDVNATDYILKPFEKDRIDETLKRV-DRI 119 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 K+ +L+ + + T R +++ D+ ++ ++ V + + ++ TL Sbjct: 120 LKKPEALVNSDMCKNPRLSVTVDERTIIIKKSDILYLEAQNGNVLIYTKNLPLISSKQTL 179 Query: 180 RTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEA 236 LE + LR HR +LVNL + E + N EL L NG + VSR Y+ K+ Sbjct: 180 INLEKQLDPEQFLRVHRSFLVNLDMILEFQPSFNHTYELTLINGTKITVSRSYVAKTKKV 239 Query: 237 IGL 239 +G+ Sbjct: 240 LGI 242 >UniRef50_B5YGI8 Sensory transduction protein LytT n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YGI8_THEYD Length = 257 Score = 232 bits (592), Expect = 9e-60, Method: Composition-based stats. Identities = 85/254 (33%), Positives = 134/254 (52%), Gaps = 16/254 (6%) Query: 1 MI-KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 M+ ++VDDEP ARE L L +I+GE +A + I K++ DV+FLDI+MP Sbjct: 1 MLFSAIVVDDEPYAREELIYILSHFPTCQIIGEAGSAKDCIFLYSKVKSDVVFLDIEMPD 60 Query: 60 ISGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE 118 +SGLE+ ML P IVF TA+D+YAI+AFE A DY+LKP +E R+ KT+ R+ Sbjct: 61 MSGLEIANMLSTFNEPPLIVFATAYDDYAIEAFELGAIDYILKPFEEKRIAKTIMRIENL 120 Query: 119 RSKQ--------DVSLLPENQQALKFIPCTGH-SRIYLLQMKDVAFVSSRMSGVYVTSHE 169 ++ Q +S ++ K +P I + D+ + + GV + + + Sbjct: 121 KNNQTEWNNAVNKLSQFLGKKKVFKKLPVQQKAGVISFIPYVDILYCEAYEGGVKIFTLK 180 Query: 170 GKEGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL-TVPV 225 E + + TL LE R +R H+ Y+VNL ++ + G L++ +PV Sbjct: 181 D-EYYFDGTLSELEMRLKEEGFMRVHKSYIVNLKRIEAVLPWFKGTYWLVIEGKKIQLPV 239 Query: 226 SRRYLKSLKEAIGL 239 S+ +K LKE +G+ Sbjct: 240 SKSIIKELKEVLGI 253 >UniRef50_Q482L9 LytTr DNA-binding response regulator n=9 Tax=Alteromonadales RepID=Q482L9_COLP3 Length = 280 Score = 232 bits (592), Expect = 9e-60, Method: Composition-based stats. Identities = 81/277 (29%), Positives = 136/277 (49%), Gaps = 40/277 (14%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + +IVDDEPLAR+ L + L+ DI ++ +C N E + A+ + D++FLDIQMP ++ Sbjct: 3 LSTIIVDDEPLARKGLAIRLRAHDDINVIEQCCNGREALEAIRAYQVDLMFLDIQMPGLN 62 Query: 62 GLEMVGMLDPE--HRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 G +++ + + P +VF+TAFD+YA+KAFE HA DYLLKP DE RLE+T+ +++ Sbjct: 63 GFQVIESIIEQGLAMPVVVFVTAFDQYALKAFEVHALDYLLKPADEERLEQTIDKIQHYF 122 Query: 120 SKQDVSLLP----------------------ENQQAL------KFIPCTGHSRIYLLQMK 151 + +N Q L + + + +K Sbjct: 123 KSSADTAHKSKLVRLVSDVTGNDYQKILTELDNDQELTLSSYSDVLAIKDAGEVNRVSVK 182 Query: 152 DVAFVSSRMSGVYVTSHEGK-------EGFTELTLRTLE---SRTPLLRCHRQYLVNLAH 201 D+ ++ + + V + E K T++ LE +R HR +VN Sbjct: 183 DILWIDAAGDYMCVHTLETKQNTRQENTYILRKTMKELEACLDPKQFIRNHRSTIVNKNI 242 Query: 202 LQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIG 238 + + + NG+ L+L+NG + VSR Y +K+A+ Sbjct: 243 IDKFCSQVNGEYFLVLKNGKELKVSRSYKDKVKQAVN 279 >UniRef50_D2PNH6 Two component transcriptional regulator, LytTR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PNH6_9ACTO Length = 237 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 76/242 (31%), Positives = 126/242 (52%), Gaps = 8/242 (3%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI+ LIVDDEP AR L L E D+E+V + + + + RPD +FLD+++P Sbjct: 1 MIRALIVDDEPPARARLERMLGEHPDVEVVAAVGDVPAAMRRLAQDRPDTVFLDVRLPGD 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G ++ +L RP +V TA+ ++A++AF+E A DYLLKP RL + LAR+R+ Sbjct: 61 DGFTLLELLGRSDRPAVVCTTAYADHAVRAFDERAVDYLLKPFSRERLAEALARVREHHR 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + P + IP G + I + ++ V V + + V V + + + TLR Sbjct: 121 ----PVRPAGPAPARRIPVPGPTGIGFVDVRRVESVRAERNYVRVHT-DDRRVLLRATLR 175 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 +E R P +R +R +V + + E++ +G+ L L +G V R + ++ A+ Sbjct: 176 EMEDRLPGQEFVRVNRSVIVRIDRVVELQPLPHGEVALRLASGDQVVSGRSHAAVVRAAL 235 Query: 238 GL 239 GL Sbjct: 236 GL 237 >UniRef50_Q1IKW2 Transcriptional regulator, LytR/AlgR family n=2 Tax=Acidobacteria RepID=Q1IKW2_ACIBL Length = 253 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 79/247 (31%), Positives = 131/247 (53%), Gaps = 14/247 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + +IVDDE LAR L L S+IE++ EC+N E + AV + +PD+LFLDIQMP++ Sbjct: 6 LTAVIVDDEELARAVLHEMLSHHSEIELIAECANGFEAVKAVTERKPDLLFLDIQMPKLD 65 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E++ ++ + IVF TA+D+YA+KAF+ HA DYLLKP R E LAR ++ + Sbjct: 66 GFEVLELIGSDM--AIVFATAYDQYALKAFDVHAVDYLLKPYGADRFEAALARAKERARE 123 Query: 122 QDVSLL--------PENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 + + + Q + + ++++ + FV ++ + + S G + Sbjct: 124 KKPTPVSAELRAAATAPGQYADRLVVRDGTNVHIIPTAKLDFVEAQDDYIALASK-GAKH 182 Query: 174 FTELTLRTLE---SRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYL 230 + T+ ++E LR HR Y+VNL + ++ IL++G +PVSR Sbjct: 183 LKQQTISSIETVLDPKQFLRIHRSYIVNLDRVAKVEPYGKDSRVAILQDGTKLPVSRSGY 242 Query: 231 KSLKEAI 237 L+E + Sbjct: 243 ARLREVL 249 >UniRef50_C8P5Q7 Response regulator n=2 Tax=Lactobacillaceae RepID=C8P5Q7_9LACO Length = 245 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 75/245 (30%), Positives = 129/245 (52%), Gaps = 9/245 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +KVLIVDDEPLA LR L +Q +++ V E + K PD++FLDI++ + Sbjct: 1 MKVLIVDDEPLALSELRFLLDKQPNVDQVVEADGVTAAKQQLAKEVPDMMFLDIRLEDGN 60 Query: 62 GLEMVGMLDPEHR-PYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+ L PYIVF TA+D+YA+ AFE A DY++KP ++ ++++ + R+++ Sbjct: 61 GMAFAKQLKERPDCPYIVFATAYDQYALDAFEAQAVDYVMKPFEQGQIDEAVNRVQKLLD 120 Query: 121 KQDVSL---LPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL 177 + + Q A + + R ++Q + ++ + V + +E + Sbjct: 121 RSARTPGGRQVSQQNANPRLSLSSDDRTLVVQKTAIYYIEAVKGKTKVVT--DREIISSQ 178 Query: 178 TLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLK 234 L+ L ++ L+ HR Y+VNL ++E++ N L L NG VPVSR Y+ ++K Sbjct: 179 ALKKLYAQLDPGQFLQVHRSYIVNLNQVREVQPSFNQTYVLTLENGAKVPVSRSYVAAVK 238 Query: 235 EAIGL 239 A+G+ Sbjct: 239 LALGI 243 >UniRef50_Q1ISZ6 Transcriptional regulator, LytR/AlgR family n=2 Tax=Acidobacteria RepID=Q1ISZ6_ACIBL Length = 262 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 74/260 (28%), Positives = 126/260 (48%), Gaps = 22/260 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + +IVDDE LAR+ L LQ D++++ + N VEG+ + + PD++FLD+QMP + Sbjct: 3 LSAVIVDDEQLARDELAYLLQSIGDVDVIAQGKNGVEGVNLIKEHNPDLVFLDVQMPGLD 62 Query: 62 GLEMVGML--DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 G ++ L P ++F TAFD+YA+KAFE +A DY+LKP D+ R+ + + + ++ Sbjct: 63 GFGVIKKLLDRKVAMPQVIFATAFDQYAVKAFEVNAVDYVLKPYDKKRIAQAIDKAKKNL 122 Query: 120 SKQDVSLLP---------------ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVY 164 + + E + I + R++L+ KD+ F S + Sbjct: 123 ESAEPAPSNDQRIDALVKMLEQKTEQKAGQSKILLKANGRMFLVDQKDICFASIEDGVIT 182 Query: 165 VTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-- 219 V + + TL L R HR +LVN+ ++E+ ++ + + Sbjct: 183 VVAANMEGQSNCRTLEELLDSLDPGAFWRAHRSFLVNINRIKEVVPWFKSSYQIRMDDRK 242 Query: 220 GLTVPVSRRYLKSLKEAIGL 239 +PVSR K L+E GL Sbjct: 243 QTEIPVSRAQTKRLRELFGL 262 >UniRef50_Q097A8 Response regulator of the LytR/AlgR family n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q097A8_STIAU Length = 259 Score = 231 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 72/257 (28%), Positives = 130/257 (50%), Gaps = 27/257 (10%) Query: 8 DDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGLEMVG 67 DDE +AR++L L ++ +VGEC++ + + A+ + DVLFLD++M + G +++ Sbjct: 2 DDERIARQSLLSLLAADPEVRVVGECASGPQAVEALRQHPVDVLFLDVEMAGMDGFQVLR 61 Query: 68 MLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSKQDVSLL 127 PE I+F+TA+D +A+KAFE HA DYLLKP D+ R + LAR ++ + L Sbjct: 62 QAGPELSAAIIFVTAYDTHALKAFEVHALDYLLKPFDDERFARVLARAKEHVRNGRIQTL 121 Query: 128 PEN-----------------------QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVY 164 + L+ + R+ + +++V ++ + + Sbjct: 122 ARQLAGLLGAAPPPPAAAPVTPPPEPPRYLERLVLKDVGRVAFVNVEEVDWLEAEDYYIQ 181 Query: 165 VTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL 221 V + G+ +LR LE++ +R HR +VN+ ++E+R +G+ +ILR+G Sbjct: 182 VHTA-GQTHLIRQSLRELETQLDPRRFVRIHRSTIVNVERVKELRPLFHGEYHVILRDGN 240 Query: 222 TVPVSRRYLKSLKEAIG 238 + +SR Y L +G Sbjct: 241 QLKLSRSYRARLDALLG 257 >UniRef50_Q484G6 LytTr DNA-binding response regulator n=1 Tax=Colwellia psychrerythraea 34H RepID=Q484G6_COLP3 Length = 260 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 84/248 (33%), Positives = 131/248 (52%), Gaps = 11/248 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 KVL+VDDEP AR+ L FL+E SD ++V E N VE + + K P ++FLDIQMP++ Sbjct: 11 YKVLVVDDEPAARQKLIHFLKEHSDFDVVAEARNGVEALECIDKFTPSLVFLDIQMPKLD 70 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+ + L+ IVF+T F+EYAI AFE +A DYLLKP D+ARL KTL R R+ Sbjct: 71 GISVASNLEFNKEVSIVFVTGFNEYAISAFELNAVDYLLKPYDKARLAKTLNRFREFSGT 130 Query: 122 QDVSLLPE-------NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF 174 +P+ +Q K + I + + +V ++ S + V + E Sbjct: 131 TQKFDIPKLVQDYRTDQHYPKTLLFKAEGSIEVAKADEVQWIESSGNYVKICL-ERTAFI 189 Query: 175 TELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLK 231 TL ++S+ +R HR +++N+ + ++ G L LR+G + +SR Y + Sbjct: 190 ARQTLTGVQSQLDPTIFVRIHRSHVININEVIQVTPISKGDHTLQLRSGTELRLSRAYQE 249 Query: 232 SLKEAIGL 239 + + L Sbjct: 250 NFFKVFNL 257 >UniRef50_B8CWX9 Two component transcriptional regulator, LytTR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWX9_HALOH Length = 253 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 90/252 (35%), Positives = 131/252 (51%), Gaps = 15/252 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ L+VDDE AR L L+ V E N + + V+ DV+FLDIQMP ++ Sbjct: 3 MQALVVDDEAPARNELIFMLENSKVNFRVREADNGKKALELVNNHNFDVIFLDIQMPSLT 62 Query: 62 GLEMV-GMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GLE+ +L E +P IVF+TA+DEYAIKAFE +A DYLLKP R E+T+ R+ Sbjct: 63 GLEVAAEILKVEDKPEIVFVTAYDEYAIKAFELNAVDYLLKPFSRKRFEETINRVMSHSK 122 Query: 121 KQDV-------SLLPENQQALKFIPCTGH-SRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 K + + + LK IP RI LL+ ++ + ++ V++TS EG Sbjct: 123 KDRIKDTIKINKAISQLTPELKRIPVNSKRGRIKLLKPSEIYYATTEGGKVFITSEEGVF 182 Query: 173 GFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN--GLTVPVSR 227 F L+ LE RCHR YLVNL+ ++E+ G LI+ + +PV R Sbjct: 183 EFANG-LKELEEMLNLPQFFRCHRSYLVNLSKVKELIPWFKGNYYLIINDESEEEIPVGR 241 Query: 228 RYLKSLKEAIGL 239 + LK+ + L Sbjct: 242 TRVNELKKKLNL 253 >UniRef50_A8VV77 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VV77_9BACI Length = 249 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 76/245 (31%), Positives = 126/245 (51%), Gaps = 8/245 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ ++VDDEP +R+ L L + +E+V + E + + K PD +FLDI+M + Sbjct: 6 IRTVVVDDEPYSRDELMYLLSKTDGVEVVAAAGSHDEALERILKHEPDAVFLDIEMGEKN 65 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GLE+ G+L P IVF TA+ ++AI AF +A DY+LKP DE ++++ + R+ Sbjct: 66 GLELAGILTKLAKPPQIVFATAYPDFAITAFRLNALDYVLKPFDEGQVQEAVNRILSAIQ 125 Query: 121 KQDVSLLPE--NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELT 178 ++ + Q + I+ L + ++ + V S +G E T LT Sbjct: 126 QESKPPANDGITQGVCTKLAVHYDEVIHYLSPNAIDYIFREGNITKVVS-QGSEYETRLT 184 Query: 179 LRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKSLK 234 L+ L + R H+ YLVNL ++E+ NG +L L + +PVSR Y+K L+ Sbjct: 185 LKDLSEKLKDYSFFRTHKGYLVNLNRVEEMTPWFNGACQLKLEHVDTQIPVSRNYVKQLR 244 Query: 235 EAIGL 239 + + L Sbjct: 245 QELEL 249 >UniRef50_C9RRP4 Two component transcriptional regulator, LytTR family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RRP4_FIBSS Length = 254 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 90/255 (35%), Positives = 139/255 (54%), Gaps = 20/255 (7%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQS-DIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 M LI DDEPLAR +R L+ S +IEI+GE S+ + I +H+L PD++FLDIQMP Sbjct: 1 MFTALIADDEPLARVRMRSLLEAYSSEIEILGEASSGAQTIQKIHELDPDIVFLDIQMPD 60 Query: 60 ISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 + E++ L+ + P IVF TA+D +A++A+EE+ DYLLKPID RL+ T+ +LR+ Sbjct: 61 MDAFEVLKSLNEDDIPLIVFTTAYDNFALRAYEENVVDYLLKPIDPERLQATMGKLRKRM 120 Query: 120 SKQDVSLLPENQQALKF-------------IPCTGHSRIYLLQMKDVAFVSSRMSGVYVT 166 ++ +P + KF + RI L+ M +V S Sbjct: 121 PHEEGLGVPADFSWDKFKELMSSSGLYMQRLQVKQSDRILLVNMDEVIRFQSEEKYTTAY 180 Query: 167 SHEGKEGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILR--NGL 221 + + +LTL LE+R +R HR +LV + ++ EIR D G+ ++LR N Sbjct: 181 TTTSQ-YIIDLTLVKLETRLDPRQFVRVHRAHLVAIDYIAEIRKNDAGRLCIVLRDKNRT 239 Query: 222 TVPVSRRYLKSLKEA 236 + VSR ++K++K Sbjct: 240 QITVSRNFVKTVKSL 254 >UniRef50_Q1QCQ5 Transcriptional regulator, LytR/AlgR family n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1QCQ5_PSYCK Length = 247 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 72/247 (29%), Positives = 131/247 (53%), Gaps = 9/247 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + V +V+DE LAR+ L L++ I +VGE + + + +++ +PD +FLDI++ + Sbjct: 1 MNVYVVEDEVLARQELIYLLKDTGKINVVGEADDIHQALWDINEKQPDAVFLDIELEGGN 60 Query: 62 GLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ--- 117 GLE+ + + P +VF+TA+DEYA+ AF+ A DY++KPID RL K + +L + Sbjct: 61 GLELAKQFSNMKKPPMVVFVTAYDEYALNAFKLDAIDYIVKPIDRGRLIKAVEKLIKLGS 120 Query: 118 ----ERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 E + + L + I RI ++ KD+ ++ + Y+ + E K Sbjct: 121 VPNSENLVKPLPLPSTHNDKKHSITVKQADRIIIINTKDILYIGTENRQAYIQTLEKKYP 180 Query: 174 FTELTLRTLESR-TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKS 232 L + ++ ++ HR Y+VN + + N +IL++G + VSR Y+K+ Sbjct: 181 TDTLLYKMMDKLGDNFIQVHRGYIVNTKQIAALEPWFNRTYLIILKDGSKIAVSRSYVKA 240 Query: 233 LKEAIGL 239 +K+ +GL Sbjct: 241 VKQVLGL 247 >UniRef50_B5JL04 LytTr DNA-binding domain family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JL04_9BACT Length = 255 Score = 229 bits (586), Expect = 5e-59, Method: Composition-based stats. Identities = 79/256 (30%), Positives = 129/256 (50%), Gaps = 21/256 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ LI+DDE LARE L ++ I G+ S+ + + L+PD+LFLDIQMP ++ Sbjct: 1 MRALIIDDESLARERLATLIEADGRATIAGQASDGASALKQIAALKPDLLFLDIQMPELT 60 Query: 62 GLEMVGML--DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 G+++ L ++ P I+F+TA+D +A+KAF+ HA DYLLKP D AR L + Sbjct: 61 GIDVATALHDSEQNLPLIIFVTAYDAFALKAFDLHATDYLLKPFDRARFTAALDKALAAH 120 Query: 120 SKQDVSLL-------------PENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT 166 +++ S + + L + RI L+ + DV ++++ + YV Sbjct: 121 QQRESSDIQQRLSALISDFHPKKTDTYLDRLSIKTEGRILLVPIGDVDYIAA--ANNYVE 178 Query: 167 SHEGK-EGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT 222 H G TL LE++ LR R +V + ++EI +G+ L L NG Sbjct: 179 VHVGSVTHLMRETLSQLEAQLDPKNFLRISRSSIVAIDRIREIHPLFHGEHTLHLANGQK 238 Query: 223 VPVSRRYLKSLKEAIG 238 + +R Y +LK +G Sbjct: 239 LTATRSYRDALKPLLG 254 >UniRef50_A1ZP21 Response regulator of the LytR/AlgR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZP21_9SPHI Length = 263 Score = 229 bits (585), Expect = 6e-59, Method: Composition-based stats. Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 28/262 (10%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IKVLIVDDEP+ARE + + L E + +++VGE SN E + + PD+LFLDIQMP ++ Sbjct: 3 IKVLIVDDEPIAREMINILLAEHTGLQVVGEASNGEEALKLIDTQTPDLLFLDIQMPGMT 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR----- 116 G+ + ++VF+TA+DEYA+ AFE +A DYLLKP + R +T+ +++ Sbjct: 63 GISLAQKFAG-FYGHLVFVTAYDEYALAAFELNAIDYLLKPFTKKRFHQTIEKVQSKFQQ 121 Query: 117 ------------------QERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSS 158 Q +++ +L+ N L ++I + + +V + Sbjct: 122 ASLNRVEDKLLQLAQDYSQLKAQVQPTLIDSNDTYLSRFVARQANKIVFIDIVEVEAIVG 181 Query: 159 RMSGVYVTSHEGKEGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAEL 215 + V H G + TL+ +R LR HR Y++ + ++E+ NG+ Sbjct: 182 ASDYIEVH-HAGNKSLVNTTLQETAARLNPEDFLRIHRSYILPIRQIKEVVPHFNGEYFF 240 Query: 216 ILRNGLTVPVSRRYLKSLKEAI 237 +++NG R Y +++ Sbjct: 241 VMKNGQKYKSGRTYKTQVQQLF 262 >UniRef50_A5VAK9 Two component transcriptional regulator, LytTR family n=10 Tax=Sphingomonadales RepID=A5VAK9_SPHWW Length = 266 Score = 229 bits (584), Expect = 8e-59, Method: Composition-based stats. Identities = 79/260 (30%), Positives = 130/260 (50%), Gaps = 29/260 (11%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ ++VDDEPLA + LR+ L D+EI+ C N E I A+ +PD++FLDIQMP Sbjct: 3 IRTILVDDEPLAIQGLRLRLAAHEDVEIIETCLNGREAIRAIKTHKPDLVFLDIQMPGFD 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G ++ L P VF TA++++AI+AF+ A DYLLKP+DE RL TL R+RQ ++ Sbjct: 63 GFSVIQGLMEVEPPLFVFCTAYEDHAIRAFQAQALDYLLKPVDEQRLADTLDRVRQRLAE 122 Query: 122 Q-------------------------DVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFV 156 + + P + + K I +I+ + + + + Sbjct: 123 KKGVEEVGRLKEVLAEVAPDAADSYGESDDAPASNRFEKMINIKDRGQIFRVDVDTIERI 182 Query: 157 SSRMSGVYVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQA 213 + + + + + T++ LE R R HR +VNL +++++ NG+ Sbjct: 183 DAAGDYMCIYTGDN-TLILRETMKDLEKRLDPRRFQRVHRSTIVNLDLVRQVKPHTNGEC 241 Query: 214 ELILRNGLTVPVSRRYLKSL 233 L+L +G V VSR Y + + Sbjct: 242 FLVLDSGAQVKVSRSYREVV 261 >UniRef50_C5CI41 Two component transcriptional regulator, LytTR family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CI41_KOSOT Length = 235 Score = 229 bits (584), Expect = 8e-59, Method: Composition-based stats. Identities = 73/242 (30%), Positives = 134/242 (55%), Gaps = 13/242 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IK ++VDDE +AR+ + +++ +IE++GE S+A E + + +P+V+FLDIQ+P + Sbjct: 3 IKAIVVDDEIIARKAIIELIEDYQNIEVMGEASSAEEALDIIKTKKPNVVFLDIQLPGFN 62 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+E V +L+ E + +VF++A+DEYA+ AFE A DYL+KP+ R T+ R+ + + Sbjct: 63 GVEFVELLNRLEEKVLVVFISAYDEYALDAFEVDAVDYLMKPVSPERFAVTVERIEKVLA 122 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 K+ V L+ +P + + ++ ++++ + S VY+ + E + L Sbjct: 123 KEGV---------LEKVPVKEDNLLEMVDLEEIFYFESMDKKVYLHTKEDELEVYRYNLS 173 Query: 181 TLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQ-AELILRNGLTVPVSRRYLKSLKEAI 237 LES P R H+ ++VNL ++ + L L NG +P+ + Y +K+ + Sbjct: 174 ELESSLPSFFARVHKSFIVNLKKVRRFSSWPGSRSYFLTLSNGKEIPIGKNYKSKIKKLL 233 Query: 238 GL 239 L Sbjct: 234 HL 235 >UniRef50_UPI000178918B two component transcriptional regulator, LytTR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178918B Length = 264 Score = 228 bits (583), Expect = 9e-59, Method: Composition-based stats. Identities = 79/258 (30%), Positives = 127/258 (49%), Gaps = 22/258 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IK +I +DE LARE L L+++ DIE++ +N E + V +PDV+FLD+ MP + Sbjct: 4 IKTMIAEDERLAREELAYLLEQEPDIELLPHAANGRELLELVPLRQPDVVFLDVHMPELE 63 Query: 62 GLEMVGMLDPEH-RPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GL+ ML P IVF TA+DEYA++AF +A DYLLKP RL++TL R+R Sbjct: 64 GLQAARMLKASPISPLIVFTTAYDEYAVEAFGLNAIDYLLKPYSHMRLKETLQRIRSRIQ 123 Query: 121 KQDVSLLPENQQALK----------------FIPCTGHSRIYLLQMKDVAFVSSRMSGVY 164 + + E A++ + + L+ + + + + Sbjct: 124 EGNAFPKQEAHDAIQAAPYPSTEAAARSMRGKLLFDDGDKHVLVDPEAILYAVREERVIR 183 Query: 165 VTSHEGKEGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL 221 V + EG+ ++ TL+ LE + R HR YLVN+ + E+ NG ++L+ Sbjct: 184 VWTAEGQRITSKSTLQELEEKLAGYSFFRPHRSYLVNVNWIAELSPWQNGAYNIVLKGEQ 243 Query: 222 T--VPVSRRYLKSLKEAI 237 +P+SR + L + Sbjct: 244 RSMIPLSREAARDLFRLL 261 >UniRef50_A5G4A4 Two component transcriptional regulator, LytTR family n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G4A4_GEOUR Length = 279 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 76/249 (30%), Positives = 123/249 (49%), Gaps = 18/249 (7%) Query: 3 KVLIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +IVDDEP L+ L +++I+ E +N + + + +L PDV FLDI+MP I Sbjct: 10 TAIIVDDEPHLCAFLKRQLTSCWPELDILAEANNGPDALRLIGELHPDVAFLDIRMPGID 69 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL++ + ++VF+TA+D+YA++AFE A DYLLKP+ RL KT+ RL+ + S Sbjct: 70 GLDLASRVG--TLCHVVFVTAYDQYAMQAFENAAVDYLLKPVALERLNKTVNRLKSQLSS 127 Query: 122 QDVSLLP----------ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGK 171 L P +Q L+++ + H+ I L+ + +V F + V + Sbjct: 128 VPPDLSPLIAKLSEQIRPQKQYLQWLQVSSHNDIELIPVDEVEFFQASDKYTLVVTRN-T 186 Query: 172 EGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELIL-RNGLTVPVSR 227 E +L+ LE R HR +V +A + I + G L L + G T+ V R Sbjct: 187 ERIMRKSLKELEEELDPERFWRVHRNAIVRVAAIARISRDFRGHHVLHLHQGGRTLAVGR 246 Query: 228 RYLKSLKEA 236 Y ++ Sbjct: 247 NYSHLFRQM 255 >UniRef50_C1A9K0 LytT family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9K0_GEMAT Length = 298 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 140/298 (46%), Gaps = 62/298 (20%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++VLIVDDE LAR+ +R LQ ++D+E+VGE + E +G + +L+PD++ LD+QMP + Sbjct: 3 VRVLIVDDEALARQRVRRLLQNEADVEVVGEAESGHEAVGLIRELQPDLVCLDVQMPGLD 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEAR-------------- 107 G ++ L+ H P ++F+TA+DE+A +AF+ HA DY+LKP+D R Sbjct: 63 GFGVLRELEGGHVPMVLFITAYDEHAQRAFDVHAVDYVLKPVDADRFRSAFDKARRQRAH 122 Query: 108 ---------LEKTLARLRQERSKQDVSLLPEN---------------------------- 130 L +T+ RL S SLL Sbjct: 123 AVAAERLGELLETVRRLADGNSDNATSLLGSTLGGALGLGGAGSGGTALAPAPTAGATST 182 Query: 131 -----QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE-GFTELTLRTLES 184 + I R++ ++ ++ ++ + + YV H GK+ + LE Sbjct: 183 QGGGAGRYASRILVKQDGRMFFVKTTEIDWIEADRN--YVRLHVGKQAHTIRERISHLEE 240 Query: 185 RTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL 239 R HR +VNL ++E++ +G +IL +G + +SR Y +++ +G+ Sbjct: 241 TLDPRVFARIHRSTIVNLNRVREMQQWFSGDYVVILEDGTRLRLSRHYRDRVEKQVGV 298 >UniRef50_Q02A01 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02A01_SOLUE Length = 255 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 82/249 (32%), Positives = 134/249 (53%), Gaps = 14/249 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I LIVDDEP+AR LR L+ IEI GE +N E + + LRP+++FLD+QMP ++ Sbjct: 6 ITTLIVDDEPVARRVLREGLESIPGIEIAGEAANGREALDKIAALRPELVFLDLQMPVMT 65 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLAR------- 114 G E+V LD P IV +TAFD++A++AFE A DYLLKP+ EARL++ + R Sbjct: 66 GFEVVRRLDGPPLPVIVIVTAFDQHALQAFEAGAIDYLLKPVTEARLQRAVERAAVLLNR 125 Query: 115 ---LRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGK 171 + + PE+ ++ + S LL +V + V++ + + + Sbjct: 126 PIEIANHVASLASVTTPEHPNKIRKVVGRSGSDYVLLDADEVLAFQAERELVWIITAK-Q 184 Query: 172 EGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRR 228 F +L+T+E R R HR +VN+ H++++ + + + L NGL + VS+R Sbjct: 185 RLFATQSLKTIEERLVGPQFQRVHRNAIVNVDHVRKLTALSSQRWYMTLSNGLQLVVSKR 244 Query: 229 YLKSLKEAI 237 +++ + Sbjct: 245 QAHKIRDLL 253 >UniRef50_C6PV14 Two component transcriptional regulator, LytTR family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PV14_9CLOT Length = 256 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 78/254 (30%), Positives = 140/254 (55%), Gaps = 17/254 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IK +I++DE A E L+ L + I++VG + + G+ + +P+ F+DI MP + Sbjct: 4 IKCVILEDEIPAAEELKYILSQHELIDVVGIGYDGMSGLELIKNKKPEAAFMDINMPLQN 63 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+E+ + + I+F+TA++E+A++AFE +A DY+LKP DE R+E T+ RL + Sbjct: 64 GMELAKKVREFDENIDIIFVTAYEEHAVQAFEVNALDYILKPFDEKRIEITIKRLASKFK 123 Query: 121 KQDVS-------------LLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTS 167 + + + + ++ +K IPC + +I L+ +KD+ + + YV + Sbjct: 124 NKTIDEEKLPDIINDIINKIDKEERIVKKIPCEKNGKIVLVNIKDIYYCYIKDEKTYVKA 183 Query: 168 HEGKEGFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG--LTVPV 225 G TL+ +E +T R HR YLVN+ +++E+ NG +L++ + +P+ Sbjct: 184 KYG-TYLVGFTLQQIEGKTDFFRAHRSYLVNMDNIKELYSWFNGTYKLVMDDNNRSEIPI 242 Query: 226 SRRYLKSLKEAIGL 239 SR +K LKE IG+ Sbjct: 243 SRNNVKRLKEIIGI 256 >UniRef50_A4BK03 Transcriptional regulator n=1 Tax=Reinekea blandensis MED297 RepID=A4BK03_9GAMM Length = 253 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 83/253 (32%), Positives = 130/253 (51%), Gaps = 20/253 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 + +LI DDEPL R +L+ L+ D +IV + +N E + + + RPDV FLDI+MP + Sbjct: 1 MNLLIADDEPLLRFHLQKALENVWPDADIVAQAANGEEALALIDECRPDVAFLDIKMPGL 60 Query: 61 SGLEMVGMLDPE-HRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +GL++ L + +VFLTA+D+YA+ AFE A DYLLKP+DE RL KT+ RL+Q + Sbjct: 61 TGLDVALKLAQKGIETRVVFLTAYDDYAVAAFERGAIDYLLKPLDENRLVKTVERLQQLQ 120 Query: 120 SKQDVSLLP-------------ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT 166 ++ S P E L ++ + I ++ + +V F + V Sbjct: 121 AESSASTQPPQLDALVELVNRVERPGGLVWLNVQKGNAIKVIAVNEVRFFRAEDKYTTVV 180 Query: 167 SHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAEL-ILRNGLT 222 + + E +++R LE + R HR +VN+ H+ D G E+ IL Sbjct: 181 T-DDDEFLMRMSIRQLEEQLDLTYFWRIHRSTVVNMQHVDRAERNDAGNYEVYILGRSKP 239 Query: 223 VPVSRRYLKSLKE 235 +PVSR + K Sbjct: 240 LPVSRAHQHLFKA 252 >UniRef50_A6LQW3 Two component transcriptional regulator, LytTR family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LQW3_CLOB8 Length = 252 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 81/247 (32%), Positives = 139/247 (56%), Gaps = 10/247 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IKV IV+DE ++ + L+ + + ++VG+ + + + + PD+ F+DI +P + Sbjct: 7 IKVAIVEDEAISSDELKYIISKDGRFKVVGQAYDGISALTLIESEEPDIAFIDINIPGKN 66 Query: 62 GLEMVGMLDPEHRPYI-VFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEK----TLARLR 116 G+++ + I +FLTA+D YAI+AFE +DY+LKP DE R+E+ L + Sbjct: 67 GIKLAEDVKEIFPDIILIFLTAYDTYAIRAFELKVYDYILKPYDEKRIEESLNCALNTIS 126 Query: 117 QERSKQDVSLLP--ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF 174 + +++L EN+QALK IPC + +I L+ + ++F S YV +++ Sbjct: 127 NRNENEIINILSKLENKQALKKIPCENNGKIILIDVNKISFFYSEGERNYVKTNKDI-YC 185 Query: 175 TELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL--TVPVSRRYLKS 232 T TL+ L +T RCHR Y+VNL ++E+ NG +LI+ + +PVSR ++K Sbjct: 186 TTKTLQELTEKTNFFRCHRSYVVNLEKVKEVYPWFNGTYKLIIDDDENNEIPVSRSHVKE 245 Query: 233 LKEAIGL 239 +K +GL Sbjct: 246 IKIILGL 252 >UniRef50_A4AS29 Two-component system, regulatory protein n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4AS29_9FLAO Length = 240 Score = 226 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 78/238 (32%), Positives = 127/238 (53%), Gaps = 7/238 (2%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 K +I+DDE LARE ++ L++ + EI+GE S+ E I A+ +L PD+LFLDI MP S Sbjct: 4 YKTIIIDDERLAREEVKRALEKHQEFEIIGEASHVDEAIAAIEELEPDILFLDIHMPGKS 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G +++ L P +VF TA+D+YA+KAFE +A DYL+KP+ + R KT+ +++ E SK Sbjct: 64 GFDLLEELTK--VPNVVFTTAYDQYAVKAFEMNALDYLVKPLRDERFSKTIEKVKTELSK 121 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 + S P + I + + + D+ F+ S + + K + +L Sbjct: 122 RVTSE-PRTLSMHQKIFIKDGENCHFIPLSDIHFIESLDNYARLYFGLDK-AMIKRSLNL 179 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEA 236 L + R +R ++N+ +++EI N + ++IL G V VS R K Sbjct: 180 LAEKLDPKVFFRVNRSQIINIHYIKEIHPYFNNKLQIILTTGEKVEVSSRQSVKFKNW 237 >UniRef50_B5JSZ7 Response regulator receiver:LytTr DNA-binding region n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JSZ7_9GAMM Length = 246 Score = 226 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 75/241 (31%), Positives = 127/241 (52%), Gaps = 6/241 (2%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I VLIVDDEP AR+ L +++ E+V E N ++ I ++ + ++ LDI+MP + Sbjct: 3 ISVLIVDDEPPARQRLVRLVEKTPGYEVVAEAGNGIDAIARFNETQAQIVLLDIRMPVMD 62 Query: 62 GLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+E L E P I+F TA+ ++A++AFE HA DYLLKPI + RL++ L ++ Sbjct: 63 GIEAAQHLTQHETPPAIIFTTAYSDHALQAFESHAIDYLLKPIRQERLDQALEAAQRSNL 122 Query: 121 KQDVSLLPENQ-QALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 Q S+ ++ + + I + L+ + D+ + + V + H G E E L Sbjct: 123 AQVKSVAEDSDSDSRQHICVRNRGNLELVDIDDIFYFFAEHKYVTLR-HRGGEVLIEEAL 181 Query: 180 RTLESR--TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKSLKEA 236 LE LR HR L+ + LQ + +G ++L+N + VSRR+L ++++ Sbjct: 182 IGLEKEFGDRFLRIHRNCLIAVEQLQGLEKNADGTHRVVLKNCEDRLEVSRRHLSTVRKL 241 Query: 237 I 237 + Sbjct: 242 L 242 >UniRef50_Q317D4 Transcriptional regulator, LytR/AlgR family n=9 Tax=Desulfovibrionales RepID=Q317D4_DESDG Length = 270 Score = 226 bits (577), Expect = 4e-58, Method: Composition-based stats. Identities = 80/267 (29%), Positives = 136/267 (50%), Gaps = 29/267 (10%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ ++VDDEP AR+ + L +D+++ G +A + + + + +PD++FLDIQM + Sbjct: 3 IRCIVVDDEPPARDEMVYLLSRFADVQVAGTADSAEQALALIAQQKPDLVFLDIQMYGHN 62 Query: 62 GLEMVGM-LDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G +V LD P +VF TA+D+YAI+AF+E+A DYLLKPI+E RL K+L R+R+ + Sbjct: 63 GFYVVEQLLDYPEPPLVVFATAYDQYAIRAFDENAVDYLLKPIEEKRLAKSLDRVREALA 122 Query: 121 KQDVSLLPENQQA----------------------LKFIPCTGHSRIYLLQMKDVAFVSS 158 + Q L + RI LLQ +V F+ + Sbjct: 123 ARTEQEQDSRTQTAPPLHDDIRLGRLLEQMGRRTVLTRVAVERGGRIVLLQPDEVFFIQA 182 Query: 159 RMSGVYVTSHEGKEGFTELT-LRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAE 214 + ++ + EG +T L+ LE + R R L+N+ H++E +G+ Sbjct: 183 QGKRIWAHTTEGMAPCHGVTNLQKLEEKLAGHDFFRATRGELINMQHVREFSPWMHGKYN 242 Query: 215 LILRN--GLTVPVSRRYLKSLKEAIGL 239 +++ + + V+R +K KE +GL Sbjct: 243 IVMSDPGQTEITVNRSRVKDFKERLGL 269 >UniRef50_Q21E91 LytTr DNA-binding region n=2 Tax=Saccharophagus degradans 2-40 RepID=Q21E91_SACD2 Length = 249 Score = 226 bits (577), Expect = 5e-58, Method: Composition-based stats. Identities = 81/252 (32%), Positives = 133/252 (52%), Gaps = 17/252 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K +V+D LAR+ L L E +++ +VG+ A E I ++KLRP ++F+DI MP Sbjct: 1 MKAYVVEDSRLARKELTDLLAEHTELNLVGDSGRADEAIEQINKLRPQLVFMDINMPGKD 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G +++ L ++ P I+F+TA+ +YAIK+F+ DYLLKPI RL+K L +L++E ++ Sbjct: 61 GFQVLEAL--DYSPRIIFVTAYADYAIKSFDYDTVDYLLKPISAERLQKALDKLQREPTQ 118 Query: 122 QDVSLLPENQ-----------QALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEG 170 Q N + I + +L+++ + S + V + Sbjct: 119 QADREAEPNYTDTPVDTTAQLEEKSRIFIKDGDQCHLVELAKIIRFESCGNYTQVYF-DS 177 Query: 171 KEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSR 227 K+ F L +E R P R RQ++VNL + +I+ NG +L L+NG + VSR Sbjct: 178 KKAFVYRALSKIEERLPDLTFFRASRQHIVNLEFVTDIQPWVNGGYQLTLKNGEQIAVSR 237 Query: 228 RYLKSLKEAIGL 239 R+ LKE + L Sbjct: 238 RHATRLKEILSL 249 >UniRef50_A0Y0Z9 Response regulator of the LytR/AlgR family protein n=1 Tax=Alteromonadales bacterium TW-7 RepID=A0Y0Z9_9GAMM Length = 262 Score = 226 bits (577), Expect = 5e-58, Method: Composition-based stats. Identities = 83/253 (32%), Positives = 136/253 (53%), Gaps = 18/253 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +++L DDE ARE L L +++VG +N E I +++L PDV+ LDIQMP I+ Sbjct: 13 MRILFADDELPAREKLSHQLSLMEHVDVVGIATNGKEAIALINELTPDVVLLDIQMPEIN 72 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GLE++ +L+ ++P I++ TA+D++AI+AFE + DYLLKP ARL+K LA+ +Q+ + Sbjct: 73 GLELIDLLN--YQPIIIYTTAYDQFAIEAFEHASTDYLLKPFPIARLKKALAKAQQQLDQ 130 Query: 122 QDVSLLPEN----------QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGK 171 Q + + +L + RI+LL D+ F+ S + E Sbjct: 131 QRAHTHVTSCAGEPAFTLTESSLNKLVSKSGERIFLLSPSDIKFIKSEQGNSLAWNGETF 190 Query: 172 EGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG--LTVPVS 226 ++ TL LE +R HR YLVN+ H++EI+ NG+ +I+ + + S Sbjct: 191 NHLSD-TLDQLEHALAMHNFVRIHRSYLVNIDHIKEIQRWFNGKLMVIVNDDVKSELSTS 249 Query: 227 RRYLKSLKEAIGL 239 R LK+ + + Sbjct: 250 RAGADKLKQLLHI 262 >UniRef50_C1AAX5 LytT family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AAX5_GEMAT Length = 272 Score = 225 bits (575), Expect = 8e-58, Method: Composition-based stats. Identities = 74/261 (28%), Positives = 131/261 (50%), Gaps = 27/261 (10%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ LIV+DEPLAR +LR +Q +E+VGE +N + + ++ +L+PDVLFLDI +P + Sbjct: 11 LRTLIVEDEPLARIHLRDLVQGSMALELVGEAANGRDAVQSIAQLKPDVLFLDIHLPELD 70 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL ++ P++VF TA+D YA+ AFE A DYL+KP R E+ + RL ++ Sbjct: 71 GLAVLEQ--SLQPPHVVFTTAYDGYAVHAFELGAADYLVKPFTRERFERAVVRLLARVAQ 128 Query: 122 QDVSLLPENQQA---------------------LKFIPCTGHSRIYLLQMKDVAFVSSRM 160 D + ++ L+ + R+ + + + + + Sbjct: 129 HDDAGAGDDAPPEGPALMERVRSLHHQSSGDARLRHVYVRERGRVLPIAVDTIERLEADD 188 Query: 161 SGVYVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELIL 217 V + G+ + L L R +R HR + VNL H++ + D+G+ +++ Sbjct: 189 DYVVLVVG-GRRHLLTVPLSELLGRLDAGRFVRIHRSHAVNLDHVRAMLPADSGRWAVVM 247 Query: 218 RNGLTVPVSRRYLKSLKEAIG 238 ++G V SR + L+E++G Sbjct: 248 QSGERVLASRTGTRQLRESMG 268 >UniRef50_A7GIP3 DNA-binding response regulator, LytTr family n=12 Tax=Clostridium RepID=A7GIP3_CLOBL Length = 254 Score = 225 bits (575), Expect = 8e-58, Method: Composition-based stats. Identities = 77/252 (30%), Positives = 144/252 (57%), Gaps = 15/252 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ +I++DE A E L+ L + + + IV G V K++P+V+F+DI MP + Sbjct: 4 IRAIIIEDEKPAIEELKYVLSKYNFLNIVDVAMTGDVGYELVKKIQPEVVFMDINMPTEN 63 Query: 62 GLEMVGMLDPEHRPY-IVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+ + + ++ I+F+TA+++YA++AFE A DY+LKP D+ R+ T+ RL+++ Sbjct: 64 GISVSKKIKEFNKDINIIFITAYEQYALEAFEIDALDYILKPFDDKRIGVTIKRLQKKID 123 Query: 121 KQDVSLLP-----------ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHE 169 ++ +P + ++ LK IPC +I L+ +K++ + + YV + + Sbjct: 124 EKYKEEIPVMISDILNKLEKEEKTLKKIPCEYRGKIILIDIKNIYYCYTMEDKTYVKT-D 182 Query: 170 GKEGFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL--TVPVSR 227 +E T TL+ +E +T L R HR Y+VN+ +++E+ NG +L++ + +PVSR Sbjct: 183 SEEYITHNTLKEIEKKTDLFRVHRSYIVNIDNIKELYSWFNGTYKLVMNDKEQSEIPVSR 242 Query: 228 RYLKSLKEAIGL 239 +K +KE +G+ Sbjct: 243 NNVKKVKEMLGI 254 >UniRef50_Q0QJA1 Putative response regulator n=1 Tax=Pseudoalteromonas sp. BB1 RepID=Q0QJA1_9GAMM Length = 266 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 78/262 (29%), Positives = 133/262 (50%), Gaps = 27/262 (10%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K L+VDDE A E LR+ L+ +I ++G ++ E I +++ D++FLDI+MP S Sbjct: 4 LKTLLVDDEYSATEGLRIRLEAFPEINVIGSAASVDEAIQLLNQFDVDLIFLDIEMPTKS 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E++ PE P ++F+TAF ++A++AFE A DYLLKP+ ARL + + R+ Sbjct: 64 GFELIKHFQPESCPAVIFVTAFHQHAVQAFEVRALDYLLKPVKLARLAEAIERVVTTERL 123 Query: 122 QDVSLLPENQQAL-----------------------KFIPCTGHSRIYLLQMKDVAFVSS 158 Q + L E Q+L + + I ++ KD+ ++ + Sbjct: 124 QRKTALIEVHQSLIKDATDSQEVGAAGNSEYKFEAENLVIQDAKNPIQIIPFKDILWIDA 183 Query: 159 RMSGVYVTSHEGKEGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAEL 215 + V + + L+ LE T LR H+ +VNL+H++++ N + Sbjct: 184 AGDYMCVHT-PAETHVMRARLKELEKNTLPEDFLRIHKSTIVNLSHIKQLNPLRNSEYMA 242 Query: 216 ILRNGLTVPVSRRYLKSLKEAI 237 +L++G T+ VSR Y K+LK Sbjct: 243 VLQSGKTLKVSRTYSKNLKSLF 264 >UniRef50_C6PCY4 Two component transcriptional regulator, LytTR family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PCY4_CLOTS Length = 255 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 76/252 (30%), Positives = 131/252 (51%), Gaps = 14/252 (5%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSD-IEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 +++ L+VDDE A E L+ L + + IE++G N E + L+PDV+FLDI +P+ Sbjct: 2 ILRSLVVDDELPAIEGLKYLLSDYKNTIEVIGTAKNGTEAFDKILSLKPDVVFLDINIPK 61 Query: 60 ISGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE 118 ++G+ + + + P +VF+TA+D YAI+AFE A DYLLKPI+ RL KT+ ++ Sbjct: 62 LNGINVANNITSLDKVPLVVFVTAYDSYAIEAFEIGAIDYLLKPINPCRLNKTINKIVNM 121 Query: 119 RSKQDVSLLPENQQALKF------IPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 K D+ L + + F +P RI L+ ++ + + V V + Sbjct: 122 YDKPDMWQLYLDNETRFFEGQFHKLPVEKFGRIKLVDFNEIVYAEAMDGKVLVKTKNDIF 181 Query: 173 GFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG--LTVPVSR 227 + T++ LE+R R + ++VNL ++ EI G L++ + + VS+ Sbjct: 182 DY-NDTMKNLENRLSESIFFRVQKSFIVNLNNILEILPWFKGTYWLVMDDDKKTKISVSK 240 Query: 228 RYLKSLKEAIGL 239 ++ LK+ GL Sbjct: 241 NKIRELKKIFGL 252 >UniRef50_C3JDP1 Response regulator, two-component system n=4 Tax=Actinomycetales RepID=C3JDP1_RHOER Length = 263 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 79/244 (32%), Positives = 120/244 (49%), Gaps = 9/244 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + VL VDDE A + L L+ + + V S+A + + D +FLDI MP + Sbjct: 10 LTVLAVDDEKPALDELAFLLRAEDSVAHVHTASDATTALRILRGGSIDAVFLDINMPGLD 69 Query: 62 GLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GLE+ G+L + P +VF+TA D+ A+ AF+ A DYLLKP+ E RL + + R+ Sbjct: 70 GLELAGILSNFATPPPVVFVTAHDDRAVDAFDLGAVDYLLKPLREERLAQAVQRIVGLAG 129 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + PE + IP L+Q V +V + + + GK + + Sbjct: 130 RTKSESKPEAAPTDEVIPVELGGVTTLVQRSSVEWVEADGDYARLHTA-GKSHLVRIPIS 188 Query: 181 TLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT----VPVSRRYLKSL 233 TLESR LR HR YLV+LA + IR +G + +G +PVSRR+ + L Sbjct: 189 TLESRWADAGFLRVHRSYLVSLALVTGIRTVGSGLVVCLRPHGDKPPVELPVSRRHTREL 248 Query: 234 KEAI 237 K+ + Sbjct: 249 KDRL 252 >UniRef50_Q26BE1 Response regulator, LytR/AlgR family n=3 Tax=Flavobacteria RepID=Q26BE1_9BACT Length = 251 Score = 224 bits (573), Expect = 1e-57, Method: Composition-based stats. Identities = 74/248 (29%), Positives = 129/248 (52%), Gaps = 14/248 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQ-SDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 ++VLI+DDE AR L L+E +++E+VGE ++ +G+ + PD++FLDI+MP Sbjct: 1 MRVLIIDDEKRARHLLHTLLKEHLNEVEVVGEATDLQDGLKLIESTTPDLIFLDIEMPGE 60 Query: 61 SGLEMVGMLDPE-HRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 SGLE++ + P+ H+ I+F+TA+++YA++AF+ +A DYLLKPID L+ A+ R++ Sbjct: 61 SGLEIIKYIKPDQHQFQIIFVTAYNQYAVEAFKTNAIDYLLKPIDIEELKTAFAKARKQH 120 Query: 120 SKQDVSLLPENQQ------ALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 Q V+ E + +L I D+ + + V + +GK Sbjct: 121 HSQQVTQQLEQLRRSVKHLSLDKIVMEVPRGYMFASHNDIIYFEADGMYTKVITTDGKTN 180 Query: 174 FTELTLRTLESRTP----LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRY 229 L+ + +CHR +LVNL H+ E+ D +++ N +P+S+ Sbjct: 181 LICKPLKHFVEQLATNDLFFKCHRSFLVNLKHITELVKHDG--DYIVMENQRHIPISKSK 238 Query: 230 LKSLKEAI 237 + I Sbjct: 239 RDQFLKVI 246 >UniRef50_Q1YRG1 Response regulator n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRG1_9GAMM Length = 270 Score = 224 bits (573), Expect = 1e-57, Method: Composition-based stats. Identities = 83/264 (31%), Positives = 133/264 (50%), Gaps = 32/264 (12%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K +IVDDEPLA + LR L + +EI+GECSN + I A L PD++FLDIQMP ++ Sbjct: 4 LKTIIVDDEPLALDLLRSILGDIEGVEIIGECSNGRDAIAAASSLHPDLIFLDIQMPGVN 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E+V + + P ++F TAF+++AI AF+ HA DY+LKP+D R+E+ + R + S Sbjct: 64 GFEVVKAMQSDAMPMVIFATAFNQFAIDAFDMHAVDYVLKPLDPERVERAVQRALERFSV 123 Query: 122 QDV---------------------------SLLPENQQALKF-IPCTGHSRIYLLQMKDV 153 QD SL E + +K + + ++ D+ Sbjct: 124 QDEDTVHKVPLIGAINEITKRLDKEPGASDSLAEELPEGIKRKLLIRDSGVVKVVPFDDI 183 Query: 154 AFVSSRMSGVYVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDN 210 +V + + V G+ TLR L + +R HR +VN+ + I Sbjct: 184 DWVDAAGDYMCVH-ALGETHIVRSTLRELLEKLDEKMFIRIHRSTVVNIERVASITRLQK 242 Query: 211 GQAELILRNGLTVPVSRRYLKSLK 234 G + L L +G ++ VSR Y ++++ Sbjct: 243 GGSLLHLADGNSLRVSRNYREAIR 266 >UniRef50_Q1IJW2 Transcriptional regulator, LytR/AlgR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJW2_ACIBL Length = 254 Score = 224 bits (573), Expect = 1e-57, Method: Composition-based stats. Identities = 70/243 (28%), Positives = 123/243 (50%), Gaps = 6/243 (2%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+V+ VDDEP A + + ++E+ + +V ECS+A I ++ +LRP V+FLD+QMP + Sbjct: 6 IRVITVDDEPFALQRISRLVREEPSLSLVAECSSAASAIESICELRPQVVFLDVQMPEVD 65 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G ++ P++VF TA++EYA++AFE A DYLLKPI + R + +L+ + Sbjct: 66 GFGVLDAFQGPTLPWVVFTTAYEEYAVRAFEASAVDYLLKPISQERFSAAVGKLKTAANS 125 Query: 122 QDVSLLPE--NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 S + + I + +L V +S+ + V GK T+ Sbjct: 126 VGTSNARSGLDASRYERILIKTDGKFVMLDPGQVERISAAGNYAIVY-AAGKSYIIRETM 184 Query: 180 RTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEA 236 ++ R R +R +VNL+ +QE+ +G+ + G V ++R Y +L+ Sbjct: 185 TRIQCRVDPRRFFRVNRSEIVNLSFVQELEPTCHGEYSITTIFGTKVTLTRTYRDALQRM 244 Query: 237 IGL 239 + + Sbjct: 245 LSM 247 >UniRef50_B1HWP9 Sensory transduction protein n=2 Tax=Bacillaceae RepID=B1HWP9_LYSSC Length = 247 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 84/246 (34%), Positives = 137/246 (55%), Gaps = 9/246 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + V IVDDEPLAR LR L++ + + I GE + E + D LFLDI++ + Sbjct: 1 MNVYIVDDEPLARAELRYLLEQTALVNICGESESLDEFYHTTQYEQVDCLFLDIELGMNN 60 Query: 62 GLEMVGM-LDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GL++ L E +P I+F TAFDEYA++AFE +AFDY+LKP + R++ + +L +R Sbjct: 61 GLDLAKQLLLHEQKPEIIFATAFDEYALQAFEVNAFDYILKPFEAQRVQAAVEKLVAKRR 120 Query: 121 KQDVSLLPENQ----QALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTE 176 V + E + L + + RI L++++D+ + +S S V + +G+ F Sbjct: 121 AAQVKTIEEIKVSQLDKLDKLTVYVNDRILLMKIQDILYCTSEDSKTVVVTEQGR-FFAS 179 Query: 177 LTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSL 233 +L LE + +R HR ++VNL H+ E+ + + LIL N ++PVSR Y+K + Sbjct: 180 ESLAALEKKLTLKGFVRVHRAFIVNLEHIVELEPWSSSKYNLILYNRHSIPVSRLYMKDV 239 Query: 234 KEAIGL 239 ++ L Sbjct: 240 RKIFDL 245 >UniRef50_Q01R04 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01R04_SOLUE Length = 253 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 74/251 (29%), Positives = 125/251 (49%), Gaps = 16/251 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ LI+DDE RE LR L DI I GE + VE + + LRPD+LFLDI+MP ++ Sbjct: 1 MRSLIIDDEESGRERLRRMLAAHPDIVIAGEARDGVEAVQQIEALRPDLLFLDIEMPGLT 60 Query: 62 GLEMVGMLDPEHR-PYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ--- 117 G E++ L P P ++F+T +D++A+ A++ +A YLLKP++ RL + +AR R+ Sbjct: 61 GFEVLQALPPGVSLPLVIFVTGYDQHALAAYDANALAYLLKPVEADRLAQAVARARKLHG 120 Query: 118 ------ERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGK 171 + + + E + L+ I C RI L+ + + + V + + Sbjct: 121 TPGEPARAGENILRVARETPRNLRQIVCRKRDRILLVPPEQILWFQVEDGLVKAHTA-AE 179 Query: 172 EGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN--GLTVPVS 226 + L LE+ R R+ LVNL+ ++EI+ L + + G + +S Sbjct: 180 TFWVNYQLNELEAGLDSALFFRARREVLVNLSCIKEIKPYFKSGFLLTMADAAGTEIAIS 239 Query: 227 RRYLKSLKEAI 237 R K ++ I Sbjct: 240 ERQSKQFRQRI 250 >UniRef50_C7PBU1 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PBU1_CHIPD Length = 257 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 85/249 (34%), Positives = 144/249 (57%), Gaps = 15/249 (6%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 ++ L+VDDE +A L+ LQ I+IVGE + + +++LRP+++FLDI+MP Sbjct: 9 IVTTLLVDDEVIAIHRLKKALQVYPQIKIVGEAMDGAAAVELINRLRPELVFLDIRMPGF 68 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G E++ L + P IVF+TA++EYAI+AFE+++ DYLLKP++E RLE T+ R+RQ Sbjct: 69 NGFEVLDRLT--YMPMIVFVTAYEEYAIRAFEKNSLDYLLKPVEEERLEMTINRIRQRPK 126 Query: 121 KQDVSLLP--------ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 ++ L +++ + IP +I+L+ ++DV + +R V V + EG+E Sbjct: 127 QETELLSRIKMLLGEQQSEPRISTIPVRSGDKIFLVHVQDVVLLEAREKYVVVHT-EGEE 185 Query: 173 GFTELTLRTLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN--GLTVPVSRR 228 + +L LE R P +R HR Y+VN ++EI+ G L++ + G V + Sbjct: 186 QLIDYSLSYLEGRLPETFVRVHRSYIVNKLKIREIQKYFKGTFMLLMNDRKGSKVKTAAS 245 Query: 229 YLKSLKEAI 237 Y ++K + Sbjct: 246 YNDTIKTKL 254 >UniRef50_UPI0001C42EF9 two-component response regulator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42EF9 Length = 244 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 78/243 (32%), Positives = 133/243 (54%), Gaps = 7/243 (2%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IK +I+DDEP +R+ L L E DIE++ C++A G+ ++ PD++FLDI MP+I+ Sbjct: 4 IKTMIIDDEPHSRDELSHLLSEHKDIEVIDRCTDAQSGLVSIMNKEPDLVFLDIDMPKIN 63 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GLE+ L+ + +P ++F TA ++YA KAF AFDYLLKP DE L + L+R R + Sbjct: 64 GLELASSLNKLKKKPKVIFATAHEQYAAKAFRVQAFDYLLKPFDEEELSEALSRYRDQMD 123 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 ++ S + + L + + I + + +++ + + E KE L+ Sbjct: 124 DKE-SDERKIESRLTRLAVEDNEEISYIDPNTIIYMAREERDTVIRTRE-KEYRLRTPLK 181 Query: 181 TLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKSLKEA 236 L+ + P ++ H+ YLVN A + + NG ++ L+ +P SR Y+++L+E Sbjct: 182 DLKQKLAGYPFVQTHKSYLVNAAEIAGLIPWFNGAYQIKLKGVKEEIPASRTYVRALREQ 241 Query: 237 IGL 239 L Sbjct: 242 FEL 244 >UniRef50_Q3CYS0 Response regulator n=8 Tax=Streptococcus agalactiae RepID=Q3CYS0_STRAG Length = 244 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 75/243 (30%), Positives = 127/243 (52%), Gaps = 6/243 (2%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +KVL+VDDEP+AR L L + ++ E + + + + DV LDI + S Sbjct: 1 MKVLVVDDEPVARNELIYLLNKYDSNLVIAEAHDMATALAILLRETFDVALLDIHLRDDS 60 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GL++ ++ P ++F TA+D+YAI+AFE A DYLLKP + RL++ + R++ S Sbjct: 61 GLQLAEYINKMPKPPLLIFATAYDQYAIQAFEHDARDYLLKPYEFDRLKQAMDRVKGALS 120 Query: 121 KQDVSLLPENQQALK-FIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 + + K P T RIYL+ D+ + + + + + + K + +L Sbjct: 121 TSTIIESVTSGPLFKQQYPLTVEDRIYLVSADDILLIEAMQGKLIIQTPD-KNYEIDGSL 179 Query: 180 RTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEA 236 + + + P +R HR Y+VN+ ++ I N +L L N +TVPVSR +K LK+ Sbjct: 180 QQWQDKLPSSQFVRVHRSYIVNINAIKTIEPWFNQTLQLHLCNKITVPVSRANVKPLKQM 239 Query: 237 IGL 239 +G+ Sbjct: 240 LGI 242 >UniRef50_Q023F4 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q023F4_SOLUE Length = 251 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 78/248 (31%), Positives = 126/248 (50%), Gaps = 12/248 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++LIVDDEPL R +R L + DIE+ GEC + E + + D++ LD+++P Sbjct: 4 FRLLIVDDEPLIRAGIRDGLSGRDDIEVAGECGSVSEAVDLLRSDEVDLVLLDVELPDGK 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G +++ + P +VF+TA+D+YAI+AFE +A DYLLKP D++RL +L R+R + Sbjct: 64 GFDVIRRVGTYRMPAVVFVTAYDKYAIQAFEVNAVDYLLKPFDQSRLLASLDRVRDRLAG 123 Query: 122 QDVSLLPENQ--------QALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 SL + Q + + R L+ + V ++ + + + Sbjct: 124 AGESLARRLEALIQSRETQWPQTLVVRQGERYDLISVTSVDWIEAANNYAVLHCGTVDHV 183 Query: 174 FTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYL 230 F E TL +LE+R LR HR +VN A + + G EL LR G V R+Y Sbjct: 184 FGE-TLASLETRLDPAKFLRVHRSVIVNSARIVAVHTMIGGVYELELRGGTRVKTGRQYR 242 Query: 231 KSLKEAIG 238 +++ +G Sbjct: 243 DRIRKLLG 250 >UniRef50_C1P760 Two component transcriptional regulator, LytTR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1P760_BACCO Length = 238 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 75/243 (30%), Positives = 133/243 (54%), Gaps = 9/243 (3%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+K +VDDE AR+ L L++ +E+ GE + E + + + D++F+D+ + Sbjct: 1 MLKAFVVDDEAPARDELIYLLKKTGQVELAGEAGSVKEALAKLKETEADIVFVDMMLTNE 60 Query: 61 SGLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 G+++V + P +VF TA+DEYA+KAFE +A DY+LKP +E R+ +T+A++++ Sbjct: 61 HGIDLVKEISRHPQHPAVVFATAYDEYAVKAFELNAADYILKPFEEKRVAQTVAKVKKML 120 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 ++ + + T RI ++ ++ + + S + G V + + K+ +L Sbjct: 121 EGDRPAVPKNPGK----LAVTTDERIVIIPVEKLLYAES-VDGRTVIATDDKKYTITESL 175 Query: 180 RTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEA 236 +E + P + R HR YLVNL + EIR + LI+R+G +PVSR Y LK+ Sbjct: 176 VNVEKKLPSTSIARVHRAYLVNLDGIVEIRPWFHSTYNLIMRDGAKIPVSRTYKHVLKQF 235 Query: 237 IGL 239 I + Sbjct: 236 IRI 238 >UniRef50_C6W647 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W647_DYAFD Length = 248 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 75/248 (30%), Positives = 130/248 (52%), Gaps = 14/248 (5%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQ-SDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 MIK +I+DDE E L L+ + + CS+ +GI A+ + RPDV+FLDI+MPR Sbjct: 1 MIKCVIIDDENNCLEMLEWLLKTYAPGVSVAAMCSSGEKGIEAIREHRPDVVFLDIEMPR 60 Query: 60 ISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 ++G +M+ D H +VF TA+D++AIKAF+ A +YLLKPID L +T+ R+ ++R Sbjct: 61 MNGFDMLEKFDKLH-FDVVFTTAYDKFAIKAFKYSALNYLLKPIDPDDLIETIRRIEEKR 119 Query: 120 ---SKQDVSLLPENQQALK----FIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 S++ + LL +N + +K I T + + +D+ + + + V G++ Sbjct: 120 SVPSREQIELLFQNVRQMKNTPQRIALTAGDGMIFVPTQDILYCEAESNYTSVVLVTGRK 179 Query: 173 GFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRY 229 L+ ++ R H YLVNL +++ + G +++ N + + +SR Sbjct: 180 VVVSKVLKDIDEALSGPDFYRVHNSYLVNLNRIKKFVRGEGGY--IVMDNDVAISISRSR 237 Query: 230 LKSLKEAI 237 + E Sbjct: 238 RQEFMEMF 245 >UniRef50_C1A6M9 LytT family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A6M9_GEMAT Length = 289 Score = 223 bits (568), Expect = 5e-57, Method: Composition-based stats. Identities = 77/282 (27%), Positives = 135/282 (47%), Gaps = 45/282 (15%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+VL+VDDE R LR L +SD++IVGE ++ VE + + LRPD++FLDI+MP +S Sbjct: 7 IRVLLVDDEEFNRLRLRDLLDAESDVDIVGEAADGVEAVEQIRALRPDLVFLDIRMPGLS 66 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL++V + + P VF+TA+D++A++AF A D+L+KP D+ R +TL R R+ Sbjct: 67 GLDVVRQVGVDLMPATVFVTAYDQHAVEAFRLAALDFLVKPFDDERFAQTLQRARKLVVM 126 Query: 122 QDVSLLPEN-----------------------------------------QQALKFIPCT 140 D++ + L+ I Sbjct: 127 NDLATMRARLLEVLAPSPVSAVVEGAAPDTTGAITGPGPGSGPGTGHGSGGGYLERIAVE 186 Query: 141 GHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLV 197 I + + D+ ++ + + G+ ++++LE R LR HR +V Sbjct: 187 AQGTIKPVAVADIDYILASGPYAELVVA-GRRHLVRESMQSLEDRLDPRRFLRIHRSVIV 245 Query: 198 NLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL 239 L ++ ++ G E++L+ G + VSR ++L+ +G+ Sbjct: 246 RLDRVEGLKRGAGGDGEVLLKGGGRLRVSRTRREALERWLGI 287 >UniRef50_A0Z2B9 Response regulator receiver domain protein (CheY-like) n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z2B9_9GAMM Length = 271 Score = 223 bits (568), Expect = 6e-57, Method: Composition-based stats. Identities = 78/271 (28%), Positives = 123/271 (45%), Gaps = 36/271 (13%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +KV +VDDEPLARE L L SDIE+ N E I + DV+FLDIQMP + Sbjct: 1 MKVAVVDDEPLAREFLTQILNGSSDIEVTASYKNGREAITGLRLDPVDVVFLDIQMPGLG 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E+V L + P +VF TA E+A++AF+ HA DY+LKP R+ +TL+R Sbjct: 61 GFEVVQALQSDTMPLVVFATAHSEFAVEAFDLHAVDYILKPFSAERVYETLSRCATRLMA 120 Query: 122 QDVSLLPENQQALKF---------------------------------IPCTGHSRIYLL 148 V + + + LL Sbjct: 121 LSVDSAEDGPDVTDRTARQKGAVISAMGGQSGRVLDAANTITSMDVGKLAIKDGQQTTLL 180 Query: 149 QMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRTLESRTP--LLRCHRQYLVNLAHLQEIR 206 QM ++ ++ + + V G+ T++ L +R P +R HR +VNL+ ++ + Sbjct: 181 QMDEIEWIDAAGDYMCVH-ASGQTHILRSTMKELVARLPDNFVRIHRSTIVNLSKVEVVE 239 Query: 207 LEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 G+A+L++ G + VSR + K ++ + Sbjct: 240 GLPKGEAQLLIVGGGVLKVSRNFRKEIQNLL 270 >UniRef50_B1YHS9 Two component transcriptional regulator, LytTR family n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YHS9_EXIS2 Length = 231 Score = 223 bits (568), Expect = 6e-57, Method: Composition-based stats. Identities = 74/242 (30%), Positives = 138/242 (57%), Gaps = 15/242 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ ++++DEPLAR+ LR + + ++++ E + E V L+PD++FLDI++ S Sbjct: 1 MRTILIEDEPLARDELRYHVVR-AGLDVIAETGHVGEAEQLVRTLQPDLVFLDIELIDGS 59 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GL++ L H P I+F+TA+D +A++AFE +A+DY+LKP D +R+ + + ++ ++ + Sbjct: 60 GLDVAKRLQSMPHPPAILFVTAYDTHALEAFELNAYDYILKPYDPSRISRAIEKIMRKPA 119 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + ++ + ++ LL +DV ++ + + + + + TL+ Sbjct: 120 LK--------TPRIERLAVESGEQLKLLSPQDVDYIVAESGKTKLVTR-SESYPSNDTLQ 170 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 LE + LR HR YLVNLA ++ I NG + ++ + VPVSR Y+K LKEA+ Sbjct: 171 ELERKLSGHRFLRVHRSYLVNLAAIEAIEPWFNGAYTIKIQ-QIDVPVSRTYVKVLKEAL 229 Query: 238 GL 239 G+ Sbjct: 230 GI 231 >UniRef50_A8MGZ3 Two component transcriptional regulator, LytTR family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MGZ3_ALKOO Length = 246 Score = 223 bits (568), Expect = 6e-57, Method: Composition-based stats. Identities = 76/245 (31%), Positives = 135/245 (55%), Gaps = 8/245 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I +I+DDE L+ E L L + IEIVG+ ++G+ + L+PD+ F+D++MP IS Sbjct: 3 ITAVIIDDEYLSIEELSFLLSKIHFIEIVGKAECGLDGLDLIRNLKPDLAFVDVKMPDIS 62 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ--E 118 G+++V ++ + I+F TA+D+YAI+AF A DY+LKP +E R+ K+L + R+ E Sbjct: 63 GIQLVKKINELDIHCKIIFTTAYDKYAIEAFNVDAIDYILKPYEEKRVIKSLLKAREIIE 122 Query: 119 RSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELT 178 + + + LP A + R+ L+ KD+ + + +++ + + + + + Sbjct: 123 NTAKQHTELPPVNIAFNKLSALKDDRLILIDTKDILLIYTEDRNIFIKTKK-EIFSSSYS 181 Query: 179 LRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKSLK 234 ++ LE R R HR YLVNL ++E+ NG +L +P+SR ++K K Sbjct: 182 MQELEERLSKDGFFRTHRSYLVNLNKIKEVSPWFNGSYIAVLDGINDEIPISRNHVKEFK 241 Query: 235 EAIGL 239 +G+ Sbjct: 242 RILGI 246 >UniRef50_A3M1E2 Alginate biosynthesis regulatory protein n=20 Tax=Moraxellaceae RepID=A3M1E2_ACIBT Length = 246 Score = 222 bits (567), Expect = 6e-57, Method: Composition-based stats. Identities = 82/245 (33%), Positives = 127/245 (51%), Gaps = 11/245 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +KVLI DDEPLA E L + + E+V + + + PDV+ LDIQMP ++ Sbjct: 1 MKVLICDDEPLAVERLSRLVSKMGH-EVVATAHHGQDALEQARLHHPDVILLDIQMPGMN 59 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GL L RP IVF TA+D++A++AF+ A YLLKPID LE+T +L Q Sbjct: 60 GLVCAEQLSQLNPRPAIVFCTAYDQHALEAFKSQAQAYLLKPIDPQELEQTFKQLTQLTQ 119 Query: 121 KQ-----DVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFT 175 Q LL + + I + + L+ ++++ + + V V H+ Sbjct: 120 AQLSALPKPELLQDLKTQRHQIAAKTYRGVELIPVENIYYFLADQKYVTVR-HKNGSVLI 178 Query: 176 ELTLRTLESR--TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKS 232 + TL+ LE+ +R HR LV++A+L + L +GQ ++ LR + VSRR+L + Sbjct: 179 DETLKELETEFADQFIRIHRNALVSIAYLDGLELVSSGQYQVRLRGLDERLSVSRRHLST 238 Query: 233 LKEAI 237 L+E I Sbjct: 239 LRERI 243 >UniRef50_C0ZBJ6 Two-component response regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBJ6_BREBN Length = 242 Score = 222 bits (567), Expect = 7e-57, Method: Composition-based stats. Identities = 79/242 (32%), Positives = 124/242 (51%), Gaps = 10/242 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+V+I +DE LARE L L ++ D+E++ +N E + V PDV+FLD++MP + Sbjct: 3 IRVMIAEDERLAREELSYLLLQEGDVELLPYATNGRELLEMVDVHEPDVVFLDMKMPELE 62 Query: 62 GLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G + ML + P IVF TA++E+AI AF+ +A DYLLKP + RL +T+ R+R+ Sbjct: 63 GAQAARMLASRKQHPLIVFCTAYEEFAIDAFKLYAVDYLLKPTEPKRLVETMQRIRERLV 122 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 K V + Q + +SR+ ++ + + V + + T +TL Sbjct: 123 KPKVEPV---QTKRTKLLVEDNSRLVVIDPTTIVYAVREERYVQIVTQTA-TYSTRMTLT 178 Query: 181 TLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL--TVPVSRRYLKSLKE 235 L + R H+ YLVNL + E+ NG LIL+ +PVSR K L + Sbjct: 179 QLAEKLFAYDFFRTHKSYLVNLQFVSELEPWFNGAYNLILKGEGRPRIPVSRTSAKDLLK 238 Query: 236 AI 237 + Sbjct: 239 RL 240 >UniRef50_D2QK93 Two component transcriptional regulator, LytTR family n=5 Tax=cellular organisms RepID=D2QK93_9SPHI Length = 245 Score = 222 bits (567), Expect = 8e-57, Method: Composition-based stats. Identities = 79/247 (31%), Positives = 135/247 (54%), Gaps = 11/247 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K LI+DDE LAR LR L+ ++I+GE +NA E + + +L P++LFLDIQMP + Sbjct: 1 MKTLIIDDERLARNELRRLLENFPKVQIIGEAANADEALPMIEELEPELLFLDIQMPGKN 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E++ ++ + P ++F TAFDEYAIKAFE +A DYLLKP++ ARL + + R+ +E+ Sbjct: 61 GFELLQSIEGKT-PEVIFTTAFDEYAIKAFEYNALDYLLKPVELARLSEAIHRVEEEQHI 119 Query: 122 QDVSLLPENQQALKFI------PCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFT 175 + S + K + + + +++ V S + V + + ++ Sbjct: 120 PEASGAGPIGISTKILGENDQVFVKDGEKCWFVKLGKVRLFESMGNYVRLYF-DDQKPLV 178 Query: 176 ELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKS 232 +L LE R R +R++++NL +++I +G + LR G + +SRR Sbjct: 179 LKSLNALEDRLNPATFFRANRKHIINLQWIEKIEPWFSGGLLVTLRGGDKIEISRRQAIR 238 Query: 233 LKEAIGL 239 K+ + L Sbjct: 239 FKDLLSL 245 >UniRef50_Q01YJ9 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01YJ9_SOLUE Length = 252 Score = 222 bits (567), Expect = 8e-57, Method: Composition-based stats. Identities = 78/247 (31%), Positives = 131/247 (53%), Gaps = 18/247 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +KVLIVDDEPLARE +++ L S +V E N E + + + +PD++ LD+QMPR+ Sbjct: 3 LKVLIVDDEPLAREGIKLMLGGDS---LVMEARNGREAVTKIREEKPDLVLLDVQMPRMD 59 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR----- 116 G +V + + P ++F+TA D+YA++AFE A DYLLKP+ E R AR R Sbjct: 60 GFGVVEAVGADKMPAVIFITAHDQYAVRAFEISAVDYLLKPVTEERFRTAFARARNRLRA 119 Query: 117 ---QERSKQDVSLL---PENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEG 170 E ++Q +++L +Q L + L + +V ++ + + V V + + Sbjct: 120 APGDESARQMLAVLDAIANPRQYLSRLAVRSGEGTLFLTIDEVEWIEAAQNYVCVHAGQT 179 Query: 171 KEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSR 227 K + + T+E+ +R HR Y+VNL H++ + + Q L L +G +P R Sbjct: 180 K-HLLHVAMNTMENSLDPERFVRIHRSYIVNLQHIKRLWTLPHRQYILELASGERLPSGR 238 Query: 228 RYLKSLK 234 Y + ++ Sbjct: 239 TYGEKIR 245 >UniRef50_A0PY89 Sensory transduction protein lytT n=3 Tax=Clostridium RepID=A0PY89_CLONN Length = 236 Score = 222 bits (567), Expect = 8e-57, Method: Composition-based stats. Identities = 68/243 (27%), Positives = 129/243 (53%), Gaps = 12/243 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + ++VDDE +RE L+ F+++ S+I+I E +++E + + + +PDV+FLDI MP++ Sbjct: 1 MNCIVVDDEYPSREELKFFIKQASNIDIDEEFDDSIEALEYIQQNKPDVVFLDISMPKLD 60 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+ + +++ +++ +VF+TA+ E+AI+AFE AFDY+LKP E R+ TL RL S Sbjct: 61 GMSLAHIINEMDNKIIVVFITAYKEHAIEAFETEAFDYILKPYSEERIISTLKRLENLES 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 +++ + + I ++ +L + D+ + + V + + ++ Sbjct: 121 QKNDNCIK------NKIALRKDEKLKVLGISDICYCRADEKKTIVYTA-IDDYIENCSIS 173 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKSLKEA 236 + P R HR Y+VNL + EI N + L+ +PVSR + K+ Sbjct: 174 DFYKKLPKKVFFRTHRSYIVNLDKITEIIPWFNNTYIIKLKGLDEEIPVSRNKMNDFKQL 233 Query: 237 IGL 239 + + Sbjct: 234 MNI 236 >UniRef50_Q87K77 Uncharacterized response regulatory protein VPA0021 n=17 Tax=Vibrionales RepID=Y4021_VIBPA Length = 263 Score = 221 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 74/258 (28%), Positives = 131/258 (50%), Gaps = 26/258 (10%) Query: 2 IKVLIVDDEPLARENL-RVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 +I DDEPL R +L + + +++IV + ++ + + A+ + +PD+ FLDI+MP + Sbjct: 5 FTAIIADDEPLLRHHLDKSLAEVWPELDIVAKVADGEQALLAIEQSQPDIAFLDIRMPVL 64 Query: 61 SGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 G+ + L+ + P IVF+TA+D+YAIKAFE++A DYLLKPI +ARL+ T R++ Sbjct: 65 DGMSLAQKLNRLANPPLIVFVTAYDDYAIKAFEQNAADYLLKPISDARLQTTCERVKARL 124 Query: 120 SKQ----------------DVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGV 163 S++ P+ Q L++I T I+L+ DV + + V Sbjct: 125 SQRGSDNSHVQMNSLLEQLQQLSAPQTPQYLQWIKATQGDDIHLIATSDVLYFKAEEKYV 184 Query: 164 YVTSHEGK----EGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELI 216 V + +GK E +L+ L + + HR +V ++ + ++ + G+ + Sbjct: 185 SVYAQQGKGEVQEYLIRTSLKELIGQLNPEQFWQVHRSSVVQVSKISKVNKDFAGRMFVY 244 Query: 217 LRNGLTVPVSRRYLKSLK 234 + +PVSR K Sbjct: 245 V-GETKLPVSRASQSLFK 261 >UniRef50_A4E9X0 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9X0_9ACTN Length = 244 Score = 221 bits (564), Expect = 1e-56, Method: Composition-based stats. Identities = 78/243 (32%), Positives = 120/243 (49%), Gaps = 9/243 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +L+VDDEP R LR L++ + + + E N E + ++ +P+VLFLDI MP S Sbjct: 5 WNILVVDDEPPIRAELRYLLEKDTRVGQIAEAGNVTEAVESILSNKPNVLFLDITMPGRS 64 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+E+ L + P +VF+TAF E+A A+ A DY++KP+++ARL K L ++ Sbjct: 65 GIELAETLQNLKTPPVVVFVTAFAEFAADAYNLDAVDYVVKPVEDARLSKALDKIEAALG 124 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + V P + + + + DV + +R EG ++ Sbjct: 125 ARRVIHAP---RQPLRLTVDRGGKKVFIPAADVCYFEARADFCNAICAEG-TYLINESIS 180 Query: 181 TLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELIL-RNGLTVPVSRRYLKSLKEA 236 +LE R +R HR YLVNL + + + G EL L R TVPVSRR +K Sbjct: 181 SLERRLVSEGFIRVHRSYLVNLEDVHNVEIGSTGLMELRLDRVTSTVPVSRRRAAEVKAH 240 Query: 237 IGL 239 +GL Sbjct: 241 LGL 243 >UniRef50_D0ZEJ7 Two-component system response-regulator n=3 Tax=Bacteria RepID=D0ZEJ7_EDWTE Length = 245 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 70/247 (28%), Positives = 123/247 (49%), Gaps = 10/247 (4%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+ +IV+DE LARE L + S I + + + +E + R D +FLDIQ+P I Sbjct: 1 MLTAIIVEDEYLAREELAYLIGRHSQIRVQAQFEDGLEAFKYLQSHRVDAVFLDIQIPSI 60 Query: 61 SGLEMVGMLDPEHR----PYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR 116 G+ + L + R P +VF+TA E+A +AFE F+Y+LKP +EAR+ + + Sbjct: 61 DGMMLARNLLGQQRGEGGPAVVFVTAHKEFAAEAFELEVFNYILKPYNEARIVQV-LQQL 119 Query: 117 QERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTE 176 ++++++ E + T RI + + + + + YV + + + + Sbjct: 120 EQQARRPAPGSVEVNAPAATVNLTKGERIIVTPCEQIYYAEADEKLTYVYTRDDRVVLS- 178 Query: 177 LTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKS 232 ++L SR P RCHR Y VN+ ++EI N + L + +PVSR +K+ Sbjct: 179 MSLSEFISRLPTERFFRCHRSYCVNIDKIREIVPWFNSTYLIHLHDLDAEIPVSRSNIKA 238 Query: 233 LKEAIGL 239 ++ + L Sbjct: 239 FRQLMRL 245 >UniRef50_A0LZC2 Two-component system response regulator containing LytTR DNA-binding domain n=1 Tax=Gramella forsetii KT0803 RepID=A0LZC2_GRAFK Length = 254 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 67/254 (26%), Positives = 125/254 (49%), Gaps = 16/254 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K L++DDE LAR + L++ IE++GECSN I ++ +PD++FLDI M ++ Sbjct: 1 MKALVIDDEELARRRVLNLLEDVEKIEVIGECSNGRTAIERINTDKPDLVFLDINMKDMN 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E++ ++ +P ++F+TA+D YA+KAF+ AFD+LLKP + R KT+ ++ + Sbjct: 61 GFEVLKQVEISPKPIVIFVTAYDNYALKAFDAEAFDFLLKPFKDQRFFKTINKVLETTKT 120 Query: 122 QDVSLLPE--------------NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTS 167 + + +++ IP ++ L+ + ++ + + Sbjct: 121 EANVTFEKRLVEFFHEYSKGGLQLNSVQKIPVKQGNKTALVDPNHILYIQASGYYAEIFV 180 Query: 168 HEGKEGFTEL--TLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPV 225 K E L + +R HR + NL ++ EI D + + + +G + V Sbjct: 181 DSKKYVLRESLNNLSEILDSNTFVRIHRSTIANLKYVNEIIHSDYSEIDAKMTDGKLLHV 240 Query: 226 SRRYLKSLKEAIGL 239 S+ + K E IG+ Sbjct: 241 SKSHKKEFLEKIGI 254 >UniRef50_D0MDS1 Two component transcriptional regulator, LytTR family n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MDS1_RHOM4 Length = 275 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 81/275 (29%), Positives = 131/275 (47%), Gaps = 36/275 (13%) Query: 1 MIKVLIVDDEPLARENLRVFLQ---EQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQM 57 M+++LIVDDEP AR LR L+ + + E ++ VE + + + D+L LD++M Sbjct: 1 MLRILIVDDEPPARRRLRKLLEPLRASGRVAAIEEAADGVEALEKLQQQTFDLLLLDVRM 60 Query: 58 PRISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ 117 P + G E++ +DP RP++VF TA+D+YA+KAFE HA DYLLKPI++ RL + +AR+ Q Sbjct: 61 PELDGFEVLERIDPNRRPFVVFTTAYDDYALKAFEAHAIDYLLKPINQERLLEAVARVEQ 120 Query: 118 ----------------------ERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAF 155 + +Q L+ + + RI ++ + + Sbjct: 121 LQTTAQLREQEERLSRLLDWLESQQQQAAPAPGPATSYLEQLSVSYRDRILIIPVTRLVS 180 Query: 156 VSSRMSGVYVTSHEG--------KEGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQE 204 + E ++ TL LE+R +R HR +V L H++E Sbjct: 181 AEIHDGITRLYVLEEEPGAPPRLRQHVVSYTLDQLEARLNPHDFMRVHRSAIVQLRHIRE 240 Query: 205 IRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL 239 + +G+ +L L V SR K LKE + L Sbjct: 241 LIPWFSGRYKLKLTGDHEVIASRERSKLLKERLVL 275 >UniRef50_Q7P589 Two-component response regulator n=15 Tax=Fusobacterium RepID=Q7P589_FUSNV Length = 245 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 79/242 (32%), Positives = 133/242 (54%), Gaps = 9/242 (3%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI +IV+DE ARE L+ FL E+ +I+++ E N ++ + + DV+FLDI MP + Sbjct: 6 MINCIIVEDELPAREELKYFLNEEKEIKLIAEFDNPLDTLNFLENNTADVIFLDINMPDM 65 Query: 61 SGLEMVGMLDPEHR-PYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +G+ + ++ + I+F+TA+ +YA+ AFE AFDYLLKP E+R++ L L + Sbjct: 66 NGISLGKIITKMYPDMKIIFITAYKDYAVDAFEIKAFDYLLKPYSESRIKSLLKSLVNIK 125 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 S+ S+ N LK I R+Y++ + DV ++ + + S++ K+ +++ + Sbjct: 126 SEVTTSIKNTN---LKKITVNIDERLYVISLTDVDYIEASEKETLIFSNQ-KKYISKIKI 181 Query: 180 RTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT-VPVSRRYLKSLKE 235 E RCHR ++VNL + EI N + ++N T +PVSR +K LKE Sbjct: 182 SKWEEMLKGDNFYRCHRSFIVNLDKITEIEQWFNSSWIIKIKNYTTAIPVSRNNIKELKE 241 Query: 236 AI 237 Sbjct: 242 LF 243 >UniRef50_B2I5K9 Two component transcriptional regulator, LytTR family n=16 Tax=Xanthomonadaceae RepID=B2I5K9_XYLF2 Length = 252 Score = 220 bits (562), Expect = 2e-56, Method: Composition-based stats. Identities = 80/245 (32%), Positives = 128/245 (52%), Gaps = 7/245 (2%) Query: 1 MIKVLIVDDEPLARENLRVFLQ-EQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 M+++LI DDEPLARE LRV LQ + +E+V E N + + +L PD++ +DI MP Sbjct: 1 MLRILIADDEPLARERLRVLLQAQMQHLEVVAEAENGEQVLHDCQRLNPDLVLMDIAMPG 60 Query: 60 ISGLEMVGMLD-PEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE 118 I GLE L P +VF TA+ ++A+ AF+ A DYL+KP+ RL L R++ Sbjct: 61 IDGLETARYLRYLPACPAVVFCTAYGDHALSAFDVEAIDYLMKPVRAERLHAALKRVQTF 120 Query: 119 RSKQDVSLLPE-NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL 177 + + ++ + + L+ + V ++ + V + HE E E Sbjct: 121 VAGRLREPQTSCDETPRTHLCVRIRGGLRLIPLDQVRYLQADEKYVVIC-HEQGEDLIEE 179 Query: 178 TLRTLESR--TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT-VPVSRRYLKSLK 234 +L++LE +R HR L+ A L E+R +GQ + +LRN +T + VSRR + L Sbjct: 180 SLKSLEKEFSDRFVRIHRNCLIARAELTELRRCSDGQVQAVLRNVVTPLAVSRRCVPLLC 239 Query: 235 EAIGL 239 + + L Sbjct: 240 DQLRL 244 >UniRef50_Q9KL96 Uncharacterized response regulatory protein VC_A0850 n=25 Tax=Vibrio RepID=Y0G0_VIBCH Length = 261 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 72/260 (27%), Positives = 130/260 (50%), Gaps = 27/260 (10%) Query: 1 MIK----VLIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDI 55 M+ ++ DDEPL R +L L E +EIV N + A+ + +PDV+FLDI Sbjct: 1 MMNQTYTAVLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDI 60 Query: 56 QMPRISGLEMVGMLDPEHR-PYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLAR 114 +MP++ G+E+ L + + P +VF+TA+DEYA+ AFE HA DYLLKP+ +RL + Sbjct: 61 RMPKMDGIEVARRLLQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEK 120 Query: 115 LRQERSK---------QDVSLLPENQQALK-----FIPCTGHSRIYLLQMKDVAFVSSRM 160 L+Q+ + Q +S + + +K ++ + I+L+ + ++ +V + Sbjct: 121 LQQQLRRNVAPSNDLAQLMSQFEQLTRTVKPQYQVWLKASKGEEIHLIAVNELLYVKAED 180 Query: 161 SGV---YVTSHEGKEGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAE 214 + V E +L+ L ++ + HR +VN+ + ++ + G+ Sbjct: 181 KYLSLYKVHGATTHEYLLRSSLKELLAQLDPNQFWQIHRSIVVNVGKIDKVTRDFGGKMW 240 Query: 215 LILRNGLTVPVSRRYLKSLK 234 + + + L +PVSR K Sbjct: 241 VHI-DRLQLPVSRALQHLFK 259 >UniRef50_B1ZXP5 Two component transcriptional regulator, LytTR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZXP5_OPITP Length = 242 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 69/241 (28%), Positives = 111/241 (46%), Gaps = 7/241 (2%) Query: 3 KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 + LIVDDE LAR L L + +IE+ E + E A+ +LRP++LFLDIQMP SG Sbjct: 5 RALIVDDERLARRELAYLLADHPEIEVAAEAGSVGEAAAALERLRPELLFLDIQMPGESG 64 Query: 63 LEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSKQ 122 ++ R ++F+TA D++A++AFE +A DYL+KP++ ARL + R R Sbjct: 65 FDLFERARVTAR--VIFVTAHDQFALRAFEVNALDYLMKPVNPARLRVAVDRFLG-RGAP 121 Query: 123 DVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRTL 182 + T + + +A + + + S G G ++ Sbjct: 122 PPGPSAGRINYDDSVFVTIDQAPRFIAVASIACILAEGDYTRLISTTGPIGLVLKPMKEW 181 Query: 183 ESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKSLKEAIG 238 E P R R +VN AH+ NG ++ L+ + +SRRY + + Sbjct: 182 EQLLPERHFARIQRSAIVNCAHVARFEPWFNGAMQVHLKALPEPLTMSRRYARQFRAKFA 241 Query: 239 L 239 + Sbjct: 242 V 242 >UniRef50_Q47KY1 Response regulator receiver n=1 Tax=Thermobifida fusca YX RepID=Q47KY1_THEFY Length = 264 Score = 220 bits (561), Expect = 3e-56, Method: Composition-based stats. Identities = 75/243 (30%), Positives = 119/243 (48%), Gaps = 9/243 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++VL VDD PLA L L+ ++ V + + + + R D +FLDI MP + Sbjct: 8 LRVLAVDDVPLALTELCRLLRAAPEVGEVVAADDPISALRNIQADRFDAVFLDISMPGLD 67 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+E+ +L P IVF+TA +E+A+ A+ A DYLLKP+ RL L ++ + S Sbjct: 68 GVELANLLSKLSDPPVIVFVTAHEEHAVTAYGIGAVDYLLKPVRAERLAMALTKVVRMLS 127 Query: 121 KQDVSLLP---ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL 177 + P A+ +P R ++ DV FV + V + + EG + Sbjct: 128 AGTAPVTPHRVRRPDAMAVLPVETAGRTRYVRRSDVRFVEANGDYVRLHTPEG-VHLVRM 186 Query: 178 TLRTLES---RTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLK 234 + LE + LR HR YLV L+ ++E+R + +G G VPVSRR+ + L+ Sbjct: 187 PISRLEEYWADSGFLRVHRGYLVALSAIRELRSDSSGGLLAHTDLGD-VPVSRRHARELR 245 Query: 235 EAI 237 E + Sbjct: 246 EQL 248 >UniRef50_A6TN10 Two component transcriptional regulator, LytTR family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TN10_ALKMQ Length = 256 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 80/253 (31%), Positives = 128/253 (50%), Gaps = 17/253 (6%) Query: 3 KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 K+LIVDDE AR NL L++ ++V E SN + IG + D++FLDIQ+ ++G Sbjct: 4 KILIVDDERPARLNLINSLKDYGQFQVVAEASNGEDAIGFCKENTVDIVFLDIQLQDMTG 63 Query: 63 LEMVGMLDPEHR-PYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 ++ L HR P I+F TA+++YAI+AFE A DYLLKPID+ R +KT+ +L QE+ Sbjct: 64 FDVANELMALHRVPKIIFATAYNQYAIEAFEYSAIDYLLKPIDDIRFKKTMEKLLQEKEV 123 Query: 122 QDVSLLPE----------NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGK 171 L + + + I ++++L + D+ F+ + V S G Sbjct: 124 HSEKALDKVKVLLEKHLDTEHKKQKITLEKEGKLFVLCINDIIFIETDERNTKVVSKRGI 183 Query: 172 EGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT--VPVS 226 + +T+ R R HR +L+NL + E+ N ++ +R +P+S Sbjct: 184 -FISNVTMVEWTERLEQYGFFRPHRSFLINLDEIDEVIPWFNHSFQVKMRGYGQGDIPIS 242 Query: 227 RRYLKSLKEAIGL 239 R K K +GL Sbjct: 243 RNKAKVFKGLVGL 255 >UniRef50_P26275 Positive alginate biosynthesis regulatory protein n=35 Tax=Bacteria RepID=ALGR_PSEAE Length = 248 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 70/246 (28%), Positives = 120/246 (48%), Gaps = 11/246 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVG-ECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 + VLIVDDEPLARE L + + ++ SN E + + L+PD++ LDI+MP + Sbjct: 1 MNVLIVDDEPLARERLARLVGQLDGYRVLEPSASNGEEALTLIDSLKPDIVLLDIRMPGL 60 Query: 61 SGLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 GL++ L + E P ++F TA DE+A++AF+ A YL+KP+ L + L + + Sbjct: 61 DGLQVAARLCEREAPPAVIFCTAHDEFALEAFQVSAVGYLVKPVRSEDLAEALKKASRPN 120 Query: 120 SKQDVSLLPENQQ----ALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFT 175 Q +L I I L+ +++V F + V + +G E Sbjct: 121 RVQLAALTKPPASGGSGPRSHISARTRKGIELIPLEEVIFFIADHKYVTLRHAQG-EVLL 179 Query: 176 ELTLRTLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILR--NGLTVPVSRRYLK 231 + L+ LE +R HR LV ++ ++ G +L L+ +G + VSRR++ Sbjct: 180 DEPLKALEDEFGERFVRIHRNALVARERIERLQRTPLGHFQLYLKGLDGDALTVSRRHVA 239 Query: 232 SLKEAI 237 ++ + Sbjct: 240 GVRRLM 245 >UniRef50_Q0K6B3 Response regulator containing a LytTR DNA-binding domain n=2 Tax=Cupriavidus RepID=Q0K6B3_RALEH Length = 253 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 75/253 (29%), Positives = 128/253 (50%), Gaps = 22/253 (8%) Query: 3 KVLIVDDEPLARENLRVFLQEQ-SDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 LI DDE R LR LQ +++IV E +N +E A+ +L P V FLDI+MP +S Sbjct: 4 TALIADDEEHLRAYLRSKLQRHWPELQIVAEATNGIEAADAIARLSPSVAFLDIKMPGLS 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GLE+ ++ + R +VF+TA+DE+A+ AFE A DYL+KP+ E RL +T+ RLR+ + Sbjct: 64 GLEVAQGIETDTR--LVFVTAYDEFALDAFERAAVDYLVKPVSEERLGRTIERLRKALQE 121 Query: 122 Q--------------DVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTS 167 E+ L+++ + + + +++V + S V V + Sbjct: 122 AAPLPELAQLLSQLTRAQPRAESGGQLRWVRASRGNTTSHVPIQEVMYFQSDDKYVVVHT 181 Query: 168 HEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL-TV 223 +G E L L + + HR +VN+ ++ R ++ G+ + +R+ + Sbjct: 182 RDG-EHLIRTPLAELIAGLDPEVFWQIHRSSIVNMEYVAGTRRDEAGRLFVRMRDSEAEL 240 Query: 224 PVSRRYLKSLKEA 236 PVSR Y+ ++ Sbjct: 241 PVSRAYMHRFRQM 253 >UniRef50_A5FCC1 Two component transcriptional regulator, LytTR family n=6 Tax=Bacteroidetes RepID=A5FCC1_FLAJ1 Length = 243 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 65/239 (27%), Positives = 120/239 (50%), Gaps = 13/239 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K + VDDEPLA + + F+ + +++ C NAVE + + + +PD++FLDI MP ++ Sbjct: 4 LKCIAVDDEPLALKLVETFIDQTPFLQLSASCDNAVEAMSLIREKQPDLVFLDINMPNLT 63 Query: 62 GLEMVGML--DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 G+E+ +L P P IVF TA++ YAI+ ++ +A DYLLKP + ++ Q Sbjct: 64 GMELARLLQEQPGQVPKIVFTTAYNHYAIEGYKVNAVDYLLKPFSYEEFLRAANKVLQIT 123 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL-T 178 + + P +FI + + +K++ ++ S V V + ++ L + Sbjct: 124 EEASNNFQPITADD-EFIFLKVEYQWVRISLKEILYIESLKDYVKVHLDDNQKAILSLIS 182 Query: 179 LRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLK 234 L+ LE + P +R HR ++V+L + I I + + V +Y ++ K Sbjct: 183 LKALEEKLPSAKFMRVHRSFIVSLDKINAISKNS------IFIDKTEITVGEQYKETFK 235 >UniRef50_B8KBX1 Transcriptional regulator n=4 Tax=Vibrio RepID=B8KBX1_VIBPA Length = 263 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 69/255 (27%), Positives = 124/255 (48%), Gaps = 24/255 (9%) Query: 2 IKVLIVDDEPLARENL-RVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 + +I DDEPL R +L + ++EI G N + + + +P + FLDI+MP+ Sbjct: 6 LTAIIADDEPLLRFHLDKALADVWPELEIKGLAENGEQALELIEAHQPTIAFLDIRMPKC 65 Query: 61 SGLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 G++ L + +VF+TA+DEYA++AFE +A DYLLKP+ E RLE+ + RL+Q+ Sbjct: 66 DGMQAAKRLMENNSATTVVFVTAYDEYAVQAFENNAADYLLKPLSETRLEQCVTRLKQKF 125 Query: 120 SKQDVSLLP---------------ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVY 164 S + P + L +I + I+L+ + +V + + V Sbjct: 126 SVDATAQAPDMQALFQQMQQLAEQKTPNYLSWIRASKGEDIHLISVSEVLYFKAEDKYVS 185 Query: 165 VTSHEGK---EGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILR 218 + E E +L+ L ++ + HR +VN++ ++ ++ E G+ +++ Sbjct: 186 LFQQEQNKTVEYVLRTSLKELLTQLDPDQFWQIHRSTIVNVSAIERVKKEFTGKM-VVIV 244 Query: 219 NGLTVPVSRRYLKSL 233 G +PVSR Sbjct: 245 GGEKLPVSRAMQAKF 259 >UniRef50_C2D9N2 Two-component response regulator n=3 Tax=Coriobacteriaceae RepID=C2D9N2_9ACTN Length = 247 Score = 219 bits (560), Expect = 4e-56, Method: Composition-based stats. Identities = 74/250 (29%), Positives = 133/250 (53%), Gaps = 18/250 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLR------PDVLFLDI 55 I LIVDDE AR L+ L++ + + E S+A + A+ + + +V+FLDI Sbjct: 4 INALIVDDEAPARSELKYLLEQTGRVARIEEASSARSAVEALVRSKEGAEQATNVIFLDI 63 Query: 56 QMPRISGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLAR 114 MP++SG+++ L + P +VF+TA+ EYA++AF+ A DYL+KP++ RL + L + Sbjct: 64 SMPKMSGMQLAEALHKLNNPPVVVFVTAYSEYALEAFDVDAIDYLMKPVEMDRLLRALDK 123 Query: 115 LRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF 174 + Q V + + IP + R L+ + + ++ +R + + + + Sbjct: 124 VEQHLQPVGVP-----RATPERIPVEKNGRKVLIPISHIRYIEARDDYSCIYTFD-ERFL 177 Query: 175 TELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN--GLTVPVSRRY 229 + ++L E++ R HR Y+VNL +++I G +L +++ +PVSRR Sbjct: 178 STVSLAKFEAKLADHGFFRVHRGYIVNLEQVEDIEAVSAGILQLGIKDVPDKKIPVSRRR 237 Query: 230 LKSLKEAIGL 239 + SLK A+GL Sbjct: 238 VVSLKRALGL 247 >UniRef50_A1HSX1 Response regulator receiver protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSX1_9FIRM Length = 269 Score = 219 bits (560), Expect = 5e-56, Method: Composition-based stats. Identities = 75/244 (30%), Positives = 127/244 (52%), Gaps = 11/244 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K +I+DDE + + L++ DI++ + +N +E + + + D++F DI+MP +S Sbjct: 30 VKTVIIDDEQPICDEIEYLLKQHIDIDVAAKFTNPLEALEYISEQGCDLVFADIKMPGMS 89 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GLE+ L P +VF+TAF E+A++AF+ A Y+ KPI E +L + ++++R Sbjct: 90 GLELARRLSVLRATPLVVFITAFQEHALEAFDTPAVGYITKPIMEDKLARLMSKVRCLIE 149 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + + P A+ I T +I L ++ + V+V + E LTL+ Sbjct: 150 RTYQAGRP----AVSKICVTTGGKIIPLDKNEIVLAYVKDKDVFVRTKT-SEYMATLTLQ 204 Query: 181 TLE---SRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN--GLTVPVSRRYLKSLKE 235 +E + LR HRQY+VNL ++EI +G L + + VPVSR K LK Sbjct: 205 EIENILDGSNFLRVHRQYIVNLDMVREIIPWFHGSYLLRMDDCRQEEVPVSRARTKVLKN 264 Query: 236 AIGL 239 +GL Sbjct: 265 ILGL 268 >UniRef50_B9DL71 Two-component response regulator n=2 Tax=Staphylococcus RepID=B9DL71_STACT Length = 266 Score = 219 bits (559), Expect = 5e-56, Method: Composition-based stats. Identities = 84/266 (31%), Positives = 127/266 (47%), Gaps = 29/266 (10%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K LIVDDEPLAR L L + + E++ E E + + DV+FLDI + S Sbjct: 1 MKTLIVDDEPLARNELNYLLTQNGNFEVIDEAETIGETLEKLLYETYDVIFLDINLMDES 60 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR---- 116 GL++ + +H PYI+F TA D +A+KAFE A DY+LKP ++ R+ + + R+ Sbjct: 61 GLDLAEKIQKMKHPPYIIFATAHDTFAVKAFELDATDYILKPFEQDRINQAVTRVAAKLN 120 Query: 117 ------------QERSKQDVSLLPENQ--------QALKFIPCTGHSRIYLLQMKDVAFV 156 QE S++ + +NQ + +P RIY+L K++ + Sbjct: 121 YSSSSNQQTTEPQESSEKVGETVRQNQFKPSEHSIKQPSVLPIEVDERIYVLNQKEIIAL 180 Query: 157 SSRMSGVYVTSHEGKEGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQA 213 S + + ++ T L R LR HR ++N AH+Q I N Sbjct: 181 SVNNGKTTLHT-LNRDYETTEPLNNYAKRLDDTQFLRIHRSTIINQAHIQTIEHWFNYTY 239 Query: 214 ELILRNGLTVPVSRRYLKSLKEAIGL 239 ++ L L V VSR Y+K K AIGL Sbjct: 240 QVTLTGNLKVQVSRSYMKPFKAAIGL 265 >UniRef50_Q8EQQ3 Sensory transduction protein lytT n=1 Tax=Oceanobacillus iheyensis RepID=LYTT_OCEIH Length = 246 Score = 219 bits (559), Expect = 6e-56, Method: Composition-based stats. Identities = 73/244 (29%), Positives = 125/244 (51%), Gaps = 13/244 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I ++I +DE LARE L LQ+++DI + N + + + P+V+FLDI MP I+ Sbjct: 3 IHIMIAEDERLAREELMYLLQQENDIILCPSAENGDQLLNLYQEYNPNVIFLDIHMPGIN 62 Query: 62 GLEMVGMLD---PEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE 118 G+E+ + + I+F TA++ Y ++AFE A DYLLKP E R + + R+R+ Sbjct: 63 GIEVAKKIRNEFEDKDIIIIFTTAYESYGVQAFEIQATDYLLKPFSEERFKIAMNRIRKT 122 Query: 119 RSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELT 178 S + V + + + ++ ++ + F + V + + T++ Sbjct: 123 LSTKKV-----RKPKVDKLVVNLDEKMMVIDPNQIGFAAREGRTVKIHFISNEVIETKMN 177 Query: 179 LRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN--GLTVPVSRRYLKSL 233 L+ LE + P R HR YLVN+ ++EI NG L++++ T+PVSR K L Sbjct: 178 LKELEEKLSGFPFYRPHRSYLVNMDCIKEITPWFNGAYNLVIKDLAESTIPVSRTAAKGL 237 Query: 234 KEAI 237 +A+ Sbjct: 238 FDAL 241 >UniRef50_Q47XT5 Response regulator n=4 Tax=Gammaproteobacteria RepID=Q47XT5_COLP3 Length = 275 Score = 218 bits (557), Expect = 9e-56, Method: Composition-based stats. Identities = 79/271 (29%), Positives = 120/271 (44%), Gaps = 35/271 (12%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ +IVDDEPLA LR L + +IEI+ EC N E I L PD++FLDIQMP + Sbjct: 4 LRTIIVDDEPLALNLLRAKLNKVPEIEIIAECKNGREAIEKTMDLAPDLIFLDIQMPGVD 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G ++ L + P ++F TAF++YA+ AF+ HA DY+LKPIDE R+ + ++R Sbjct: 64 GFGVIKKLQSDIVPLVIFTTAFEQYALDAFDVHAVDYILKPIDEERITRAVSRAIVRFET 123 Query: 122 QDVSLLP-------------------------------ENQQALKFIPCTGHSRIYLLQM 150 ++ + I I LL+ Sbjct: 124 EEETEHKSRIIGAIDTINERENSASSSQSSQGQSSLGQNKGNLEHKIIIKDRDDITLLKQ 183 Query: 151 KDVAFVSSRMSGVYVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRL 207 D+ +V + V +G TL+ L R HR +VNL ++Q++ Sbjct: 184 ADIEWVDAAGDYCCVH-AQGVTHIKRSTLKNLLDDLDPSIFKRVHRSTIVNLNYIQKVIP 242 Query: 208 EDNGQAELILRNGLTVPVSRRYLKSLKEAIG 238 G+ L L V VSR Y +K+ + Sbjct: 243 HTKGEYFLKLGEYDQVKVSRNYRDVIKDFLS 273 >UniRef50_C1ABW9 Two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1ABW9_GEMAT Length = 276 Score = 218 bits (557), Expect = 9e-56, Method: Composition-based stats. Identities = 74/263 (28%), Positives = 129/263 (49%), Gaps = 36/263 (13%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++V+I +DEPL R +LR L ++D+++VGE VE + +PDV+ LDI+MP Sbjct: 6 LRVVIAEDEPLPRASLRRLLAARADVDVVGEAEQGVEAQALIESCKPDVVILDIRMPERD 65 Query: 62 GLEMVGML--DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 G+E+ + + + P IVF+TAFDEYA++AF+ HA DYLLKPID L++ LAR+ Sbjct: 66 GIEVAASVLANLDEPPAIVFVTAFDEYAVRAFDLHAVDYLLKPIDAEHLDRALARVFARI 125 Query: 120 SKQDVS------------------------------LLPENQQALKFIPCTGHSRIYLLQ 149 Q + L E +F Y ++ Sbjct: 126 VAQRSTGTSDGTSDGTSASTSTAARLDPALLTVLEELRIERALPQRFAVRDAKGGTYWVK 185 Query: 150 MKDVAFVSSRMSGVYVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIR 206 D+ +V ++ + V + +G++ T++ + + +R HR +VN+ +Q + Sbjct: 186 SADIDWVDAQSNYVRLH-AKGQQHLVRDTMKAFQQKLSATRFVRIHRSVIVNIDFIQRVE 244 Query: 207 LEDNGQAELILRNGLTVPVSRRY 229 +G+ + LR+G + S+ + Sbjct: 245 PHLHGEQIVTLRDGTRLRTSKSH 267 >UniRef50_C6W927 Two component transcriptional regulator, LytTR family n=19 Tax=Actinomycetales RepID=C6W927_ACTMD Length = 281 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 77/254 (30%), Positives = 125/254 (49%), Gaps = 21/254 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHK-----LRPDVLFLDIQ 56 ++VL VDDEP A E+L L+ + V +A + + +H+ D +FLDI+ Sbjct: 23 LRVLAVDDEPPALEDLVYLLRSDPRVGHVEAVGDATKALRTLHRAMDAGQPVDAVFLDIR 82 Query: 57 MPRISGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL 115 MP + GL++ +L P IVF+TA E A++AFE A DYLLKP+ + RL +++ R+ Sbjct: 83 MPGLDGLDLARVLSRFAQPPPIVFVTAHQEPAVEAFELKALDYLLKPVRQERLAESVHRI 142 Query: 116 RQERSKQDVSLLPENQQAL---------KFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT 166 E + P Q A + IP +++ ++ +V + + Sbjct: 143 VHEVLESRPVEQPAPQAAPVERAPDVGDEVIPVELGGITRFIRLAEIRYVEAHGDYARLH 202 Query: 167 SHEGKEGFTELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTV 223 + G G L LE R +R HR +LV+L H+ E+RLED + G + Sbjct: 203 TATG-SGLVRAALNGLEERWRSAGFVRIHRSHLVSLGHIDELRLEDG--HLSVNIGGAVL 259 Query: 224 PVSRRYLKSLKEAI 237 PVSRR+ + L++ + Sbjct: 260 PVSRRHARHLRQLL 273 >UniRef50_A3WHL3 Two-component response regulator n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WHL3_9SPHN Length = 260 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 74/258 (28%), Positives = 131/258 (50%), Gaps = 21/258 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++V I DDEPLA + ++ D EIVG S+ E + + RPD+L LDI MP ++ Sbjct: 4 LRVFIADDEPLALRRVLRSVKSVDDTEIVGTASDGKEALAVIAATRPDLLLLDIMMPGLT 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR----- 116 G E++ LD + P ++F+TAFD +A+ AF + DY+LKP+D+ RL + + R R Sbjct: 64 GFELLEHLDEDQTPSVIFITAFDNFAVDAFAQGVVDYILKPLDDTRLAQAIERARERMEL 123 Query: 117 ---QERSKQDVSLLPENQQAL---------KFIPCTGHSRIYLLQMKDVAFVSSRMSGVY 164 QER Q S L + + I + + ++++D+ ++ + V Sbjct: 124 DANQERFAQLRSALSQMNTDFSTAIPSPYERDIWVRENGVVRRVRVEDIDWIEAANDYVS 183 Query: 165 VTSHEGKEGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL 221 + + G + + ++R+L R + HR +V + + EI E L L++G Sbjct: 184 LHTA-GGQYLADDSIRSLAKRLNPDQFFQVHRGAIVRIQAISEINREKFSAISLTLKSGA 242 Query: 222 TVPVSRRYLKSLKEAIGL 239 V VS+ + +++ +A+ L Sbjct: 243 RVRVSKSFKRAVFDALKL 260 >UniRef50_A9DKT5 Two-component system regulatory protein n=1 Tax=Kordia algicida OT-1 RepID=A9DKT5_9FLAO Length = 240 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 75/242 (30%), Positives = 129/242 (53%), Gaps = 9/242 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I +IV+D LAR L+ L++ S IE++ E N + ++ +P VLFLDI MP + Sbjct: 4 ITAIIVEDSRLARNELKELLKKHSQIELIAEAENVDKAYELINSKQPQVLFLDINMPEKN 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G +++ ML ++ P +F TA+DEYAIK+FE +AFDYLLKPI++ R KT+ ++ K Sbjct: 64 GFDLLEML--DNVPLTIFTTAYDEYAIKSFEYNAFDYLLKPINQTRFSKTIEKVIATIEK 121 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 + P + + I +L+++ ++A + V E + +L Sbjct: 122 EATDEKP--FELHRQIFIKEGENCWLIRISEIAVFEIVGNYTRVYF-ENNKPLIYKSLNQ 178 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKSLKEAI 237 +E++ P R +RQ ++NL H+ ++ NG+ ++ ++N + VSRR K+ Sbjct: 179 IETKLPEETFFRANRQQIINLNHVDKVIPWFNGKLKVTIKNSSQEIEVSRRQSYKFKDIF 238 Query: 238 GL 239 G Sbjct: 239 GF 240 >UniRef50_D0HCT2 Response regulator n=5 Tax=Vibrio RepID=D0HCT2_VIBMI Length = 261 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 71/261 (27%), Positives = 125/261 (47%), Gaps = 27/261 (10%) Query: 1 MI----KVLIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDI 55 M+ K +I DDEPL R +L L + +E+V N + A+ +PD++FLDI Sbjct: 1 MMNQCVKAVIADDEPLLRHHLNKMLADLWPALEVVASAENGEVALQAIEHHQPDLVFLDI 60 Query: 56 QMPRISGLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLAR 114 +MP++ G+ + L P +VF+TA+DEYA+ AFE +A DYLLKP+ +RL + Sbjct: 61 RMPKLDGMAVARRLLTLPKIPLVVFITAYDEYAVSAFEANAIDYLLKPLSLSRLASCCEK 120 Query: 115 LRQERSKQDVSLLPENQ--------------QALKFIPCTGHSRIYLLQMKDVAFVSSRM 160 L+Q+ + Q Q ++ + I+LL + DV +V + Sbjct: 121 LQQQLQRNASPTADLTQLLSQFEQLTRSTKPQYQVWLKASKGEEIHLLAVSDVLYVKAED 180 Query: 161 SGVYVTSHEG---KEGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAE 214 + + +G +E +L+ L ++ + HR VN+A + ++ + G+ Sbjct: 181 KYLSLYKTQGSVTQEYLLRSSLKELLAQLDPNQFWQIHRAVAVNVAKIDKVTRDLTGRMW 240 Query: 215 LILRNGLTVPVSRRYLKSLKE 235 + + + + +PVSR K Sbjct: 241 VHI-DRVQLPVSRALQHLFKA 260 >UniRef50_Q15WR3 Response regulator receiver protein n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15WR3_PSEA6 Length = 239 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 71/242 (29%), Positives = 119/242 (49%), Gaps = 9/242 (3%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M + +++DDE LARE + ++ E+V E S+ + + +PD+ FL IQ+ Sbjct: 1 MYRCVVIDDEALARERIAQYISRSPLCEVVAEASSFENAKQLILEQQPDICFLGIQIIGG 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SG+E+ L + VF TA EYAI AFE A DYLLKP ++RL + +A++ Sbjct: 61 SGVELAKELHNSVSCHWVFTTAHSEYAIAAFELEATDYLLKPFQDSRLAQVIAKIH---- 116 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 ++ S+ P+ + + +P + + +D+ +V + V + EGK TL Sbjct: 117 RKHQSITPK-YETRRQLPIRSVGSVKFINTQDIIWVKGSANYVELYC-EGKMHLHRETLS 174 Query: 181 TL---ESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 L T +R HR +VN+ ++ + E + L L NG V + + Y L A+ Sbjct: 175 ALAQTLDPTQFIRVHRSAIVNIDYVHSLNSELGRFSLLQLDNGDEVKIGQSYKAQLLSAL 234 Query: 238 GL 239 G+ Sbjct: 235 GV 236 >UniRef50_D0IHA7 Response regulator n=1 Tax=Vibrio sp. RC586 RepID=D0IHA7_9VIBR Length = 266 Score = 217 bits (554), Expect = 2e-55, Method: Composition-based stats. Identities = 76/252 (30%), Positives = 132/252 (52%), Gaps = 22/252 (8%) Query: 4 VLIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 +I DDEPL R +L L + +EIV N + A+ + +P+V+FLDI+MP++ G Sbjct: 14 AVIADDEPLLRHHLNKMLADVWPALEIVANAENGEVALQAIEQHQPNVVFLDIRMPKMDG 73 Query: 63 LEMVG-MLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 LE+ +L RP +VF+TA+DEYA+ AF+ +A DYLLKPI +RL RL+Q+ + Sbjct: 74 LEVARSLLQLPKRPLVVFITAYDEYALSAFDANAIDYLLKPISLSRLIDCCERLQQQLQR 133 Query: 122 QDVS-----LLPENQQALK--------FIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSH 168 + L + +Q + ++ + I+LL + DV +V + + + + Sbjct: 134 AAPTADLAQLFSQFEQLTRNVKPDYQVWLKASKGEDIHLLAVSDVLYVKAEDKYLSLYKN 193 Query: 169 EG---KEGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT 222 +G +E +L+ L S+ + HR VN+A + ++ + NG+ + + + + Sbjct: 194 DGVLAQEYLLRTSLKELLSQLDPNQFWQIHRSLAVNVAKIDKVTRDLNGKMWVHI-DRIQ 252 Query: 223 VPVSRRYLKSLK 234 +PVSR K Sbjct: 253 LPVSRALQHLFK 264 >UniRef50_Q025M1 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q025M1_SOLUE Length = 247 Score = 217 bits (554), Expect = 2e-55, Method: Composition-based stats. Identities = 76/250 (30%), Positives = 128/250 (51%), Gaps = 14/250 (5%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M + +VDDE A + L LQ +EIVG N V I A+ PD+LFLDIQMP + Sbjct: 1 MFRAYLVDDELPAVKRLARLLQATGRVEIVGAEMNPVAAIEAIRVASPDILFLDIQMPGL 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G +++ + E +P+++F TA+D+YA+KAFE ++ DYLLKP++ L++ L +L Q ++ Sbjct: 61 TGFDLLARI--ERQPFVIFTTAYDQYALKAFEVNSIDYLLKPVEPEELDRALNKLEQFQN 118 Query: 121 KQDVSLLP------ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF 174 + L ++ +P R L++ + ++ + +GK Sbjct: 119 ARGPVDLRGVLEALSRHAPVQRVPIRMGERTRFLEVGRITHFFTQGRLTFAA-ADGKTHA 177 Query: 175 TELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG--LTVPVSRRY 229 + T+ LE + R HR LVNL L+E+ G+ L++ + V+R Sbjct: 178 VDCTIAELEQKLGPSRFFRIHRGTLVNLDWLEELTPWFTGRMAARLKDEKRTELIVARDR 237 Query: 230 LKSLKEAIGL 239 ++ LK +GL Sbjct: 238 VRLLKRHLGL 247 >UniRef50_Q479S3 Transcriptional regulator, LytR/AlgR family n=3 Tax=Betaproteobacteria RepID=Q479S3_DECAR Length = 262 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 85/251 (33%), Positives = 125/251 (49%), Gaps = 19/251 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQS---DIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMP 58 +KVLIVDDEPLAR+ LR L + S E+VGE +N + + A+ + DV+ DI+MP Sbjct: 11 LKVLIVDDEPLARDRLRALLSDLSAQLSSEVVGEAANGLLALEALRQQTVDVVLADIRMP 70 Query: 59 RISGLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ 117 + G+E+ L E P ++F TA+D YA++AF+ +A DYLLKP+ RL L ++ Sbjct: 71 GMDGIELATHLGRLEKPPAVIFTTAYDNYAVQAFDLNAVDYLLKPVRVQRLLAALQKVPG 130 Query: 118 ERSKQDVSLLPENQQALK-----FIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 R D SLL Q ++ + C R+ L+ + +V + + + V + E +E Sbjct: 131 PR--PDTSLLANIGQEVRGGGRTHLSCHERGRLLLVPIAEVLYFKADLKYVTARTVE-RE 187 Query: 173 GFTELTLRTLESR--TPLLRCHRQYLVNLAHLQEIRL---EDNGQAELILRNG--LTVPV 225 + L LES LR HR LV A L +D L G +PV Sbjct: 188 YLLDEALTHLESEFADRFLRLHRSVLVAKAALAGFEKAVVDDAEAYGWALLRGVPEKLPV 247 Query: 226 SRRYLKSLKEA 236 SRR + K Sbjct: 248 SRRQWAAAKAL 258 >UniRef50_A3YCL0 Response regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3YCL0_9GAMM Length = 273 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 82/272 (30%), Positives = 137/272 (50%), Gaps = 37/272 (13%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++V+I DDE L R+ LR +Q S +E+V EC N + + A+H L+PDV+FLDI MP I Sbjct: 3 LRVIIADDESLLRKELRELIQGFSALELVAECENGITTLEAIHTLKPDVVFLDIMMPGID 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL------ 115 GL++V + PE P +V++TAF+++A+ AFE A DYLLKPI E R EKT+ RL Sbjct: 63 GLKLVEHIQPEVMPKLVYITAFNQFAVNAFEVEAIDYLLKPISETRFEKTIDRLLAAMPI 122 Query: 116 -------------------RQERSKQDVSLLPENQQALKFIPCTGHSRIYL--------L 148 + + Q S + + K +P + L + Sbjct: 123 RPETVSESVLYQSQVRSSDQAMTTVQTGSQASQMHRQSKTLPNPVSKTLVLDQKVPKTEV 182 Query: 149 QMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEI 205 +++D+A+V + + + +++ K T++ L R R HR +VN +++ + Sbjct: 183 KLEDIAWVDAAGDYMCIHANQ-KTHILHSTMKALFKRLGQDQFCRIHRSTIVNKSYISKA 241 Query: 206 RLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 + G + L +G + +SR Y L + + Sbjct: 242 YPQSKGDYLVELVDGTQLRLSRTYQAVLADIL 273 >UniRef50_Q025Y4 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q025Y4_SOLUE Length = 255 Score = 216 bits (552), Expect = 4e-55, Method: Composition-based stats. Identities = 77/246 (31%), Positives = 130/246 (52%), Gaps = 21/246 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+VL+ DDEPLAR +R L D+ +VGE N E + A+ L PD+LFLD+QMP + Sbjct: 7 IRVLVADDEPLARRGVRQLLAPHRDMTVVGEARNGRETLTAIDALSPDLLFLDVQMPEMD 66 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS- 120 G E++ P P +VF+TA D++A++AFE HA DYL+KP+ R E L R+R+ Sbjct: 67 GFEVLRARGPHRMPAVVFVTAHDQFAVRAFEAHALDYLVKPLRVDRFEAALHRVRERLRL 126 Query: 121 ------KQDVSLLPENQQA---LKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEG- 170 ++ L E ++ ++++ + ++ + ++ ++ + Y H G Sbjct: 127 MEAVDLAARLTALLETKREKCGVEWLVVPVATGELVIPVAEIDWIGADD--YYACLHVGA 184 Query: 171 KEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSR 227 K +L +LE+R R HR +V + ++E+ E++LR G+ V +SR Sbjct: 185 KSYLLRESLASLETRLDPRRFARVHRSAIVQIDRIRELH-----GDEVVLRGGMRVALSR 239 Query: 228 RYLKSL 233 R ++ Sbjct: 240 RRRAAI 245 >UniRef50_C9LQT9 DNA-binding response regulator n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQT9_9FIRM Length = 256 Score = 216 bits (552), Expect = 4e-55, Method: Composition-based stats. Identities = 81/247 (32%), Positives = 133/247 (53%), Gaps = 9/247 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKL-RPDVLFLDIQMPRI 60 IK+LI DDE AR L+ L +++IVGECSN + + D++FLDI+MP + Sbjct: 9 IKILIADDELPARGELKYELSTIPNVKIVGECSNGKSVLDFLKTHPNVDLIFLDIEMPVM 68 Query: 61 SGLEMVGMLDPEHRP-YIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +GLE + P IVF T + ++AI+AF+ AFDY+LKP DE R+ + + RL+ Sbjct: 69 NGLETAKKIGEMDIPAKIVFATGYGQFAIQAFDLEAFDYILKPYDEERIRRIVDRLQNRL 128 Query: 120 SKQDVSLLP-ENQQALKFIPCTGHSRIYLL-QMKDVAFVSSRMSGVYVTSHEGKEGFTEL 177 ++++ + P E + I R+ ++ ++++ F+ + S + +++ Sbjct: 129 AEREQNRAPGEITAFSQKISLQTIDRVVIINPVQEIVFICTEKSDCSLFYTTKGIITSKI 188 Query: 178 TLR---TLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILR--NGLTVPVSRRYLKS 232 TLR +L R H+ Y+VNL+ +QEI +DNG L + + VPVSR YLK Sbjct: 189 TLRDSESLLEPVGFFRTHKGYIVNLSMIQEIHPQDNGTLLLSMDYFSRDKVPVSRHYLKD 248 Query: 233 LKEAIGL 239 K + + Sbjct: 249 FKAIMHM 255 >UniRef50_C7PAR0 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PAR0_CHIPD Length = 237 Score = 216 bits (552), Expect = 4e-55, Method: Composition-based stats. Identities = 60/236 (25%), Positives = 120/236 (50%), Gaps = 12/236 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ + VDDEPLA + L +++ +E+V +C++A E I + + D++FLDIQMP ++ Sbjct: 3 LRCIAVDDEPLALDLLEDNIRQVPFLEMVAKCADAFEAIKVLQETTVDLIFLDIQMPGLT 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL+ + L H+P I+ +TA+++YA++ FE DYL+KP+ R K + R+ Sbjct: 63 GLQFIQSLA--HKPMIILITAYEKYALEGFELDVTDYLVKPVSLPRFIKACNKARELHQL 120 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT-SHEGKEGFTELTLR 180 + L +F + + + D+ ++ + + + + K T + L+ Sbjct: 121 KHQQLTAAPGTTPEFFFVNSDYSLLKINVADIIWIEALKDYIRIHLTGTAKPVVTRMPLK 180 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSL 233 +E + P +R H+ Y++ +AH+ IR + + +PV Y +++ Sbjct: 181 QVEEQLPPARFIRIHKSYIIAVAHITAIRKNS------VFIGTMELPVGDNYREAV 230 >UniRef50_Q3SM66 Response regulator receiver domain protein (CheY) n=6 Tax=Proteobacteria RepID=Q3SM66_THIDA Length = 254 Score = 216 bits (551), Expect = 5e-55, Method: Composition-based stats. Identities = 76/245 (31%), Positives = 122/245 (49%), Gaps = 10/245 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSD---IEIVGECSNAVEGIGAVHKLRPDVLFLDIQMP 58 ++VLIVDDE AR L L + + +E+VGE N + + + D + LDI+MP Sbjct: 8 LRVLIVDDEAPARARLGDVLADCAGRLPVEVVGEAENGLAALALAQQTAVDAVLLDIRMP 67 Query: 59 RISGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ 117 + GLE L+ P I+F TA+D YA +AF+ +A DYLLKP+ RL + L+R + Sbjct: 68 VMDGLECAAHLNRLAAPPAIIFSTAYDAYACQAFDLNAVDYLLKPVRAERLVRALSRAHR 127 Query: 118 ERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL 177 +K L + +A + RI L+ + D+ ++ + + V V + +E E Sbjct: 128 LSAKTLDQLREAHPKARTHLSLNEKGRIVLIPVADILYLKAELKYVTVRTA-AREFLIEE 186 Query: 178 TLRTLESRTP--LLRCHRQYLVNLAHLQEI--RLEDNGQAELILRN-GLTVPVSRRYLKS 232 +L LE+ LR HR LV ++E+ ++ L L + VSRR + Sbjct: 187 SLTQLEAEFGERFLRIHRNCLVARDRVREVGKSPGEDEGHFLRLDGLDERLTVSRRQYTA 246 Query: 233 LKEAI 237 L+E + Sbjct: 247 LRETL 251 >UniRef50_A0M3D4 Two-component response regulator containing LytTR DNA-binding domain n=4 Tax=Bacteroidetes RepID=A0M3D4_GRAFK Length = 237 Score = 216 bits (551), Expect = 5e-55, Method: Composition-based stats. Identities = 70/240 (29%), Positives = 130/240 (54%), Gaps = 13/240 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ +IVDDE +A + + L + +IE+VG C NA E + + D++FLDI MP IS Sbjct: 5 IRCVIVDDENVALDIMENHLSKIDNIELVGRCKNATEAFNMISSNKTDLVFLDINMPGIS 64 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+ ++ + I+F TA+ EYAI F+ HA DYLLKPI RL + ++ Sbjct: 65 GISFAKSINKNIK--IIFTTAYREYAIDGFDLHAVDYLLKPISFDRLLDAVHNFQEVHLD 122 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 Q+ L +N+++ FI +++ + + ++ S + + + EG + T T+ + Sbjct: 123 QN-DLEVQNKKSGDFIFVKIDRKMHKIDFSGILWIESLSDYLKIETSEGTK-VTRETISS 180 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIG 238 +E++ P LR HR +++ + +++ E E++++N ++P+SR Y + + +G Sbjct: 181 IETKLPETKFLRVHRSFIIAIDYIESYSNE-----EVVIQN-KSIPISRTYKDEVLKCLG 234 >UniRef50_D2QUQ7 Two component transcriptional regulator, LytTR family n=3 Tax=Sphingobacteriales RepID=D2QUQ7_9SPHI Length = 250 Score = 216 bits (550), Expect = 7e-55, Method: Composition-based stats. Identities = 71/251 (28%), Positives = 121/251 (48%), Gaps = 16/251 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQ-SDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 +K L++DDEP +NLR L ++I G NA G ++ +PD+LFLDIQMP Sbjct: 3 VKALLIDDEPNNLDNLRALLDVYCPQVDICGMALNAEAGQRLLYTHQPDLLFLDIQMPGQ 62 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G +++ L PEH ++F+TA+D+YAI+A A DYLLKP+D L+ + R ++R Sbjct: 63 NGFDLLRKL-PEHDFEVIFVTAYDQYAIQAMRFAAVDYLLKPVDIGELQAAVDRAIKQRR 121 Query: 121 KQDVSLLPEN---------QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGK 171 + + EN + I ++ ++ S + +G+ Sbjct: 122 LKVQNQQLENLLTLLKTGAANEAQRITLATAKETRFVKTSEIVRCQSSNNYTTFYLTDGE 181 Query: 172 EGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRR 228 + + +RCH+ +LVN A ++ + E L+L +G +P++R Sbjct: 182 TLLVCRPIYEYDELLKSHGFMRCHQSHLVNKAFIKSWKKEFG--DFLLLTDGTELPIARG 239 Query: 229 YLKSLKEAIGL 239 LK+A+ L Sbjct: 240 KKDELKKALRL 250 >UniRef50_Q4L8V4 Sensory transduction protein lytR n=60 Tax=Bacilli RepID=LYTR_STAHJ Length = 256 Score = 216 bits (550), Expect = 7e-55, Method: Composition-based stats. Identities = 70/256 (27%), Positives = 123/256 (48%), Gaps = 19/256 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K LIVDDEPLAR L L E S ++ E N E + + D++FLDI + S Sbjct: 1 MKTLIVDDEPLARNELHYLLNEISGFNVIDEAENIEETLEKLLSETYDLVFLDINLMDES 60 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+++ + + P+I+F TA D +A+KAFE A DY+LKP + R+E+ + +++ + S Sbjct: 61 GIDLAQKIKKMKQPPHIIFATAHDTFAVKAFELDAIDYILKPFELERIEQAVNKVKHQIS 120 Query: 121 KQDVSLL--------------PENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT 166 + + + +P + RIY+++ D+ V S +G+ Sbjct: 121 NSNEIDHITSEPSTLSMQQDDRQENEDQTVLPIEMNERIYVIRKDDITAV-SVNNGITTI 179 Query: 167 SHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTV 223 + + T L E + ++ HR ++N H+ + N ++ + +G Sbjct: 180 NTTHRTYQTNEPLNYYEKKLSNNTFIKIHRATIINKTHIDSVEHWFNYTYQVTMTSGDKF 239 Query: 224 PVSRRYLKSLKEAIGL 239 VSR ++K+ K IGL Sbjct: 240 QVSRSFMKAFKHEIGL 255 >UniRef50_A5FJA4 Two component transcriptional regulator, LytTR family n=2 Tax=Flavobacteriales RepID=A5FJA4_FLAJ1 Length = 238 Score = 216 bits (550), Expect = 7e-55, Method: Composition-based stats. Identities = 70/246 (28%), Positives = 124/246 (50%), Gaps = 16/246 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K +I+DDEPLA E L F+++ +E+V +NA++ + +++ D++FLDIQMP S Sbjct: 1 MKCVIIDDEPLAVELLEDFVKKVDSLELVNTFNNAIDAVSFINQNNIDLIFLDIQMPHFS 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+E + + E +P ++F TA+ +YA++ F A DYL+KPI R K++ R +Q + Sbjct: 61 GIEFINTI--EKKPLVIFTTAYSDYAVEGFNLGAVDYLVKPIPFHRFLKSVVRAQQINNP 118 Query: 122 QDV-----SLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTE 176 +P + F+ + D+ F+ V + + + K T Sbjct: 119 AAPVQAVSENVPAPEVEQDFMFVRAEYENVKMNFSDILFIEGLKDYVKIYTTDNKFTLTL 178 Query: 177 LTLRTLE---SRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSL 233 ++L LE S R HR Y++N+ H++ I+ +L + +P+S Y + Sbjct: 179 ISLIKLENLLSNKGFSRIHRSYIINIKHVKSIQKNK------VLISDKRIPISESYKNAF 232 Query: 234 KEAIGL 239 E I L Sbjct: 233 FEKINL 238 >UniRef50_D2MJZ8 Transcriptional regulator, LytR/AlgR family n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MJZ8_9BACT Length = 260 Score = 215 bits (549), Expect = 8e-55, Method: Composition-based stats. Identities = 78/253 (30%), Positives = 125/253 (49%), Gaps = 17/253 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++V++ DDE AR+ L L+ D+++VGE + E + + +PD+ LD+QMP + Sbjct: 5 LRVIVADDERPARQFLVTMLRSFDDVDLVGEAKSGNETMRLIEHTQPDLALLDLQMPEMD 64 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL +V L P + F+TAFDE+A+ AFE A DYLLKP+D RL KT+ R + + Sbjct: 65 GLSIVRSLRHGRIPLVAFVTAFDEHAVSAFEIEALDYLLKPVDRDRLRKTIDRAHERLER 124 Query: 122 QDVSLLPENQQA--------------LKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTS 167 ++ ++Q + P IYLL + +A V S ++VT+ Sbjct: 125 DALAEQESDRQPGPADRDGPAPAGQYIDRFPIRKQDDIYLLPVHHIASVVSEGELMHVTT 184 Query: 168 HEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVP 224 + L+TLES+ LR R LVN+ +++I G + L N + Sbjct: 185 VGKERYTMNYRLKTLESKLDPKRFLRVGRGALVNVEAIRKITPMPGGSYLVTLMNTQQLR 244 Query: 225 VSRRYLKSLKEAI 237 VSR + L+ + Sbjct: 245 VSRSQSRVLRGHL 257 >UniRef50_B9TLS0 Positive alginate biosynthesis regulatory protein, putative n=2 Tax=Ricinus communis RepID=B9TLS0_RICCO Length = 238 Score = 214 bits (547), Expect = 1e-54, Method: Composition-based stats. Identities = 81/240 (33%), Positives = 131/240 (54%), Gaps = 5/240 (2%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +++LIVDDE AR LR L +Q I+ V E ++ ++ + + RPD L LDI+MP +S Sbjct: 1 MRLLIVDDERPARAKLRHLLAQQDGIDAVEEAADGIDALERIASFRPDALLLDIEMPELS 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+E+ L PE P +VF+TA++ YA +AF+ A DYLLKP D RL + LARLR++ + Sbjct: 61 GIELAASL-PEPAPLVVFVTAYERYACQAFDCDAIDYLLKPYDGDRLARALARLRKKLAA 119 Query: 122 Q-DVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + D L+ + + ++++ D+ ++ + + V + + G TL Sbjct: 120 KVDGRPAALPPAPLEQLLVSERGVTRVVRVADIQWIETADNYVVLHTAAG-SPLLRQTLA 178 Query: 181 TLESRT--PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIG 238 L R +RCHR+ +A ++ + D G EL+LR G VP SR+Y + +G Sbjct: 179 GLVDRLGAGFVRCHRRAAAQVAWIERVVTLDKGDGELLLRGGARVPCSRQYRADVLARLG 238 >UniRef50_Q028U9 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q028U9_SOLUE Length = 258 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 78/248 (31%), Positives = 129/248 (52%), Gaps = 15/248 (6%) Query: 4 VLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGL 63 VL+ DDE AR L L+++ I V E ++ + +H RPD++FLD++MP + GL Sbjct: 8 VLVADDEKPARRRLLDLLRQEPGIASVWEATDGEMAVEMIHCYRPDIVFLDVKMPELDGL 67 Query: 64 EMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR------- 116 ++ + P +F+TA+DE+AI+AFE +A DYLLKP + R ++R R Sbjct: 68 GVIDRVGIAAMPLTIFVTAYDEHAIRAFEANALDYLLKPYSDPRFRSAMSRARARLDERG 127 Query: 117 ----QERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 ER KQ ++ N L+ I G L + +V + + V + + GKE Sbjct: 128 LREFAERVKQMLTPAVVNGPPLERIVVKGRGTTRFLDVTEVECIEAAGMYVVLHTR-GKE 186 Query: 173 GFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRY 229 +L +E++ LR HR +VNLAH+ + +G+ E+IL++G V +SR Y Sbjct: 187 LLHRSSLSDMEAKLDPRNFLRIHRSAIVNLAHVGHLEAISHGEFEVILKSGKRVRLSRTY 246 Query: 230 LKSLKEAI 237 +++ + Sbjct: 247 RGPVEQRL 254 >UniRef50_C6VRX1 Two component transcriptional regulator, LytTR family n=3 Tax=Sphingobacteriales RepID=C6VRX1_DYAFD Length = 245 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 62/244 (25%), Positives = 118/244 (48%), Gaps = 13/244 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ + VDDEPLA + F+++ + + G S+AVE + ++ DV+FLDIQMP ++ Sbjct: 5 LECIAVDDEPLALGLVCAFIEKTPFLNLAGRYSSAVEALQVINSKPIDVIFLDIQMPDLT 64 Query: 62 GLEMVGMLDP--EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 G+E+ +L+ P I+F TAF++YA+ F A DYLLKP + + ++ + Sbjct: 65 GIELARVLEKAGNKAPRIIFTTAFNQYALDGFRVDAIDYLLKPFNYEEFLRAASKAQAYV 124 Query: 120 S-KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSH-EGKEGFTEL 177 Q S + +++ ++ + D+ + V V + K + Sbjct: 125 ELVQKASSAGSAEPKDEYLFLKVEYQLVRIAYDDILYTEGLKDYVKVHLKSDPKPVLSLT 184 Query: 178 TLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLK 234 +L+ LE + P +R HR ++VNL + + I +++PVS +Y ++ Sbjct: 185 SLKALEEKLPASKFMRVHRSFIVNLDKISAVTR------NTIQIGAISIPVSDQYKEAFN 238 Query: 235 EAIG 238 + + Sbjct: 239 QFLS 242 >UniRef50_B0SFX2 Response regulator n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SFX2_LEPBA Length = 245 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 63/241 (26%), Positives = 129/241 (53%), Gaps = 8/241 (3%) Query: 4 VLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGL 63 VLI++DE AR + ++ ++++ G + + +++ + D++F+DI +P ++G+ Sbjct: 8 VLIIEDEYPARMLMMDYVLNCPELKLAGIAESGDKANTLINEKKFDLVFMDINLPVVNGM 67 Query: 64 EMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSKQD 123 +++ + + + TA+ E+A++AF+ A DYLLKP R K++ + + + Sbjct: 68 DILRS-NHSKSTFFIITTAYSEHAVEAFDLDATDYLLKPFSFERFRKSVEKALRFLQESK 126 Query: 124 VSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRTLE 183 + EN + + S ++LL D+ F+S+ + + + K+ T L+ +E Sbjct: 127 QNNSNENLNKIH-LKIQSDSAVFLLPYPDIQFISANNKSCVIHTTQ-KDYETPKLLKEIE 184 Query: 184 SRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN--GLTVPVSRRYLKSLKEAIG 238 + P +R H+ +LVNL+++ +R + G + L+N T+PV R Y +SLKEA+ Sbjct: 185 EKLPTNQFVRIHKGFLVNLSYVASLRYDKGGSYTIQLKNEDETTLPVGRSYAQSLKEALK 244 Query: 239 L 239 L Sbjct: 245 L 245 >UniRef50_D2QR47 Two component transcriptional regulator, LytTR family n=2 Tax=Flexibacteraceae RepID=D2QR47_9SPHI Length = 260 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 78/258 (30%), Positives = 140/258 (54%), Gaps = 22/258 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSD-IEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 +K +++DDE LA LR L + D I+IVG+ N EG+ + L+PD++FLDI+MP + Sbjct: 5 LKTILIDDESLAVSRLRRLLGKHHDSIDIVGDAGNGAEGLTLIESLQPDLIFLDIEMPLL 64 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G EM+ L P +VF TAFD+YAI+AFEE++ DYLLKPI+ RL +T+ ++R Sbjct: 65 NGFEMLSRLT--TMPMVVFATAFDQYAIRAFEENSIDYLLKPIEAERLARTIQKIRTLVE 122 Query: 121 KQDVSLLP---------------ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYV 165 + + + + ++ + I +I L+ + D+A+ + V++ Sbjct: 123 RAEGAYPVMNPMSESVMRLLAQMQPKKEIYSISVKTGEKIKLIPLSDIAYFEAEDKYVFL 182 Query: 166 TSHEGKEGFTELTLRTLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN--GL 221 ++ +G++ T TL TL+ + P +R R +VN + E+ +G+ L + + G Sbjct: 183 STIDGQKFLTTYTLTTLDEKLPDTFVRISRSVMVNRHKISEVHRHFDGKFILAVSDKKGT 242 Query: 222 TVPVSRRYLKSLKEAIGL 239 + Y ++++ + L Sbjct: 243 RLTSGSTYSDAIRQLLEL 260 >UniRef50_Q182U2 Two-component response regulator n=5 Tax=Clostridium RepID=Q182U2_CLOD6 Length = 256 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 70/251 (27%), Positives = 125/251 (49%), Gaps = 18/251 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ +IV+DE AR+ LR F++ +S IE+V E +N +E + + + + DV+FLDI +P + Sbjct: 1 MRAIIVEDEFPARKELRYFIENKSGIEVVSEFTNGIEVLDFIQENKIDVIFLDINIPHLD 60 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER- 119 G+ + L+ + RP IVF+TA++ YA+ AF FDY+LKP E R+ L +L + Sbjct: 61 GMLLAKTLNQFKSRPKIVFITAYESYAVDAFSLDVFDYILKPYSEERIISMLNKLEKSEM 120 Query: 120 -------------SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT 166 + ++ E ++ I ++ ++ + D+ + + ++ Sbjct: 121 SDIELSNVNSNLYKYKKEAVNQEIEEITHKISLWKGDKLVVIDIDDIYYCEANERQTFIY 180 Query: 167 SHEGKEGFTE--LTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL-TV 223 + + K E + L + R HR Y+VNL ++EI N L L+N V Sbjct: 181 TEKEKFILKEGISEVENLINDKTFFRTHRSYIVNLTKVKEIIPWFNNTYILKLKNSDYEV 240 Query: 224 PVSRRYLKSLK 234 VSR +K + Sbjct: 241 TVSRSKVKEFR 251 >UniRef50_C6I7A6 Two-component system response regulator n=13 Tax=Bacteroides RepID=C6I7A6_9BACE Length = 245 Score = 213 bits (544), Expect = 3e-54, Method: Composition-based stats. Identities = 70/246 (28%), Positives = 118/246 (47%), Gaps = 15/246 (6%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MIK + VDDEPLA E L ++ ++++ C +A + + + D++F+DI MP + Sbjct: 1 MIKCIAVDDEPLALEQLTGYIARVPFLQLIASCQDAFSAMQVLSEEEVDLMFVDIHMPDL 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +GL++V L +P IVF TA+ EYA++ F+ A DYLLKP + L K + R++ Sbjct: 61 NGLDLVRSL--VVKPLIVFTTAYPEYAVEGFKVDAVDYLLKPFEFQDLLKAADKARRQFE 118 Query: 121 KQDVSLLPENQQAL----KFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTS-HEGKEGFT 175 + L + +I + + D+ ++ V + + K T Sbjct: 119 YHLQDNGGGTETDLLEKDGSLFVKSEYKIIRINVADICYIEGMSEYVRIYTDAADKPVVT 178 Query: 176 ELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKS 232 L++R LE R P +R HR Y+VNL + E+ + +I + +PV Y + Sbjct: 179 LLSMRKLEERLPQEMFMRVHRSYIVNLRKITEV-----SRLRIIFNKNIYIPVGDNYKER 233 Query: 233 LKEAIG 238 E I Sbjct: 234 FTEYIN 239 >UniRef50_C7PE44 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PE44_CHIPD Length = 244 Score = 213 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 65/239 (27%), Positives = 120/239 (50%), Gaps = 14/239 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + +I+DDEPLARE L +++E +++V C+N VE I + + D++FLDIQMP+++ Sbjct: 1 MNCVIIDDEPLAREGLSSYVREVDFLQLVATCTNPVELIRLLDEHPVDLIFLDIQMPKMN 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ--ER 119 G++ + ++ P ++ TAF YA++ F+ + DYLLKPI R K + + + Sbjct: 61 GIDFLKIVQK--PPMVIITTAFPSYALEGFQLNVMDYLLKPITFDRFFKAANKAKDYYQL 118 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 + V + + + S+ + D+ +V + V + + +GK T L L Sbjct: 119 LHKPVGEAAKTAKTEDYFFIKCGSKYEKIFFDDILYVQGMQNYVTIHTRKGK-YMTLLYL 177 Query: 180 RTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKE 235 + LE +R H+ Y+V ++ ++ I + I +P+SR Y + E Sbjct: 178 KNLEENLDRKAFIRVHKSYIVAVSKIEGIEGNE------IFIQSDKIPISRNYHDMVIE 230 >UniRef50_Q15WR1 Response regulator receiver protein n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15WR1_PSEA6 Length = 276 Score = 213 bits (542), Expect = 5e-54, Method: Composition-based stats. Identities = 77/269 (28%), Positives = 122/269 (45%), Gaps = 37/269 (13%) Query: 4 VLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGL 63 L+VDDEPLARE L + L E +I ++G C+NA + + +PDV+FLDI+MP +GL Sbjct: 6 ALVVDDEPLAREGLALRLAEYENITVLGCCNNASQAYDVLSVKQPDVIFLDIEMPGKTGL 65 Query: 64 EMVGMLDPEHRPY-IVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLAR-------- 114 E+ L E P IVF+TAF E+A+ AF+ A DYLLKP + RL++ + + Sbjct: 66 ELAEQLRLEGNPATIVFVTAFREFAVNAFDFKASDYLLKPFSDERLKECIEKLSCAGDVT 125 Query: 115 ------------------------LRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQM 150 + ++S E + + I S +++ Sbjct: 126 RVVRQHEKLGRLLSRKTGNSIDSFIHSLEVSNELSSTHELNELQQVISLKSGSVWIRVKL 185 Query: 151 KDVAFVSSRMSGVYVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRL 207 D+ ++ + + V + G TL+ E R R ++N+A L + Sbjct: 186 DDIVWIEAAGDYMCVHT-TGDTHIIRKTLKQFEQELDSVHFPRVSRSAIINIAKLTTLTP 244 Query: 208 EDNGQAELILRNGLTVPVSRRYLKSLKEA 236 NG+ L N + V V R+Y S+ E Sbjct: 245 NSNGEYVAQLGNDIQVKVGRKYKFSIDEL 273 >UniRef50_A4BAR2 Alginate biosynthesis regulatory protein AlgR-like protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BAR2_9GAMM Length = 238 Score = 213 bits (542), Expect = 6e-54, Method: Composition-based stats. Identities = 75/240 (31%), Positives = 124/240 (51%), Gaps = 7/240 (2%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++VL+VDDEPLARE L FLQ+ D+E + S+ E + ++ R DVL LDI+MP ++ Sbjct: 1 MRVLVVDDEPLARERLVRFLQDIDDVENIATASSGEEALSKLNDFRADVLLLDIRMPGLN 60 Query: 62 GLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GL + + E P I+F TA+D++A++AF+ A YLLKPI L L R+ Sbjct: 61 GLSVADRVQQQEQPPAIIFCTAYDDHAMEAFQVRAQSYLLKPIQRQALTDALHTCRRLNR 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 Q +L + QQ + + + + DV F + V + G E + +L+ Sbjct: 121 AQVQAL--DTQQQVDSLSVQHGREKEIWPLSDVYFFRAEQKYVMLFGLHG-ERVVDESLK 177 Query: 181 TLESR--TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKSLKEAI 237 LE R + +R HR L+ A ++++ + G + +R + VSRR+ + ++ Sbjct: 178 ALEQRFASSFVRVHRNTLIARARVEKLYRDHEGGYWVRVRGVEEPIAVSRRHAREVRALF 237 >UniRef50_A4E9W5 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W5_9ACTN Length = 238 Score = 212 bits (541), Expect = 8e-54, Method: Composition-based stats. Identities = 66/223 (29%), Positives = 123/223 (55%), Gaps = 10/223 (4%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M++ +IVDDE AR LR L++ I + E S+ I + + R DV+FLDI MP Sbjct: 1 MLRAMIVDDEAPARSELRFLLEQTGKIGTITEASSVRSAIEMLMESRVDVVFLDISMPGA 60 Query: 61 SGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 SGL++ L ++ P IVF+TA+ ++A++AF+ A DYL+KP++EARL++ + ++ Q Sbjct: 61 SGLQLAEALHKLKNPPAIVFVTAYSDHAVEAFDVDAVDYLMKPVEEARLDRAIEKVMQRA 120 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 + +++ ++ IP R L+ + D+ F+ ++ + + + + + +L Sbjct: 121 K-----PVTDSKVTIERIPVEKGGRKVLIPVDDIRFIMAKDDYSCIYTVDDR-FLSTTSL 174 Query: 180 RTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN 219 E++ R HR+Y+VNLA + ++ +G +L + Sbjct: 175 AQFEAKLCDFGFFRVHRRYIVNLACVTDVETVPSGAIQLGITG 217 >UniRef50_C7PII0 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PII0_CHIPD Length = 251 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 68/251 (27%), Positives = 121/251 (48%), Gaps = 18/251 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQ-SDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 ++ +IVDDE L+R L++ L++ + IV C++ + + A+ K +PD+LFLDI+MP + Sbjct: 1 MRTIIVDDEKLSRSVLKLLLEKHCPAVNIVAVCADGISALEAIEKYQPDLLFLDIEMPGL 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL----- 115 +G E++ + I+ T++D YA+ A +A DYLLKPI L + + Sbjct: 61 NGFEVLKA-CKDASFSIIVTTSYDHYALDAIRHNALDYLLKPIIRDDLTDAVDKAMARHQ 119 Query: 116 --RQERSKQDVSLLPENQQAL---KFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTS-HE 169 Q SK D S+L Q L + + + +L +KD+ + + V + Sbjct: 120 QKAQPESKSDTSILEVLHQHLYPGERLALPSPEGLRILLVKDILYCVADGETTLVHLVNT 179 Query: 170 GKEGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVS 226 +L+ +E + R H Y++NL ++ D G +I+ +G +PVS Sbjct: 180 TAPSLVCRSLKEVEGQLKNKGFFRVHHSYVINLNYMDRYIKGDGGD--IIMSDGSCIPVS 237 Query: 227 RRYLKSLKEAI 237 R + + I Sbjct: 238 RHRKQEFMDRI 248 >UniRef50_Q1YSU3 Two-component system regulatory protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YSU3_9GAMM Length = 239 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 76/241 (31%), Positives = 126/241 (52%), Gaps = 9/241 (3%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MIKVLIVDDE LAR L+ L ++SDIE+VGE N +E + H+ PD++ +D++MP + Sbjct: 1 MIKVLIVDDESLARIRLQRLLGKKSDIELVGEARNGLEAVQMAHQYLPDIVLMDVRMPEM 60 Query: 61 SGLEMVGMLDPE-HRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 GLE + P ++F TAF+++A++AF+ AF YLLKPI + L+ L R Sbjct: 61 DGLEAARQIAKMIPPPAVIFCTAFEDFALRAFDAKAFAYLLKPIKDNELDAALQRAASAT 120 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 Q P ++ + + H+ + L+ + + + + V + EG+ ++ TL Sbjct: 121 RAQLNGQTPSHR---RHLCSRTHNGLELVAAEHIRLLQADQKYVTAYTAEGETLLSD-TL 176 Query: 180 RTLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVP-VSRRYLKSLKEA 236 + +E +R HR LV ++ + G + LR+ P VSRR L++ Sbjct: 177 KDIEKEFSQFFVRVHRSALVARDAIEGL-TYAEGHLAVKLRDIAIQPIVSRRLEPKLRQL 235 Query: 237 I 237 + Sbjct: 236 L 236 >UniRef50_B1KPY2 Two component transcriptional regulator, LytTR family n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KPY2_SHEWM Length = 246 Score = 211 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 79/249 (31%), Positives = 127/249 (51%), Gaps = 16/249 (6%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+KVLIVDDE LAR L L + DIEIVGE + + + + K D+ F+DIQMP + Sbjct: 1 MLKVLIVDDEYLARLELTRLLSKYVDIEIVGEAEDGHQALELLKKTSVDLAFVDIQMPEM 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR---- 116 GLE + +VF TAF E+A+ AFE +AFDY++KPI RLE L ++R Sbjct: 61 DGLEFAKQ-AESQQFQLVFCTAFSEHAVDAFELNAFDYIVKPIMPERLEAVLNKVRLIQE 119 Query: 117 --QERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF 174 E + D+ LP+N + S ++++ ++ S + V V S GK Sbjct: 120 THDETEQDDIQCLPDNHG----LLLKFGSDYKIVRINEICRFESLGNHVAVYSDSGKSYL 175 Query: 175 TELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLE-DNGQAELILRNGLTVPVSRRYL 230 ++L +E + + R +V + + +I +G ++ + NG + VSRR + Sbjct: 176 -HISLSKVEKKLDPAVFFKASRSDIVRVDQIDKIEEGMASGSLQVHMNNGQEIDVSRRQV 234 Query: 231 KSLKEAIGL 239 + L++ + Sbjct: 235 QLLRKIFSI 243 >UniRef50_Q04FG9 Response regulator of the LytR/AlgR family n=2 Tax=Oenococcus oeni RepID=Q04FG9_OENOB Length = 247 Score = 211 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 75/246 (30%), Positives = 132/246 (53%), Gaps = 11/246 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K+L+VDDEPLAR+ L L++ + V + + + + + + DV+F+DI + + Sbjct: 1 MKILVVDDEPLARDELSYLLKQNRLTDSVYQADSIGTAVDKLLQEKIDVIFIDISLNDEN 60 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR---Q 117 G ++ L H P IVF TAFD YA+KAF+ A DY+LKP +++R+ + L +++ + Sbjct: 61 GFQLANELKKLIHPPLIVFATAFDSYAVKAFDVDAVDYVLKPFEQSRVNQALEKVQAIFK 120 Query: 118 ERSKQDVSLLPENQ---QALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF 174 ++K+D SL + + K I T + +++ D+ + G G+ Sbjct: 121 LQAKKDNSLTVNSHFGSEKTKIISITSDDKTKIIKQHDLIMA-TIKDGALTLITNGQSYS 179 Query: 175 TELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLK 231 T +L L SR L+ HR +VN+ + E+ N +L L NG+ VPVSR ++K Sbjct: 180 TRQSLGWLLSRLNKNDFLQVHRSIIVNINSISELEPWFNHTYQLKLTNGMKVPVSRSFIK 239 Query: 232 SLKEAI 237 ++K+ + Sbjct: 240 AVKKRL 245 >UniRef50_Q11YH0 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YH0_CYTH3 Length = 251 Score = 211 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 66/249 (26%), Positives = 119/249 (47%), Gaps = 13/249 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQ-SDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 IK +I+DDEP R L ++ I+++G+ + EG+ + L P+++FLDI MP + Sbjct: 5 IKAIIIDDEPDGRTVLHSLIKIYCPQIDVLGQSCSGEEGLSMIQDLNPELVFLDIDMPGM 64 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLA---RLRQ 117 +G ++ L E ++F+TA YA+KA + A DYLLKP+D+ L + + +L + Sbjct: 65 NGFSLLKRLK-EITFEVIFVTAHHHYALKAIKHSALDYLLKPVDKTELIEAVEKFIKLDK 123 Query: 118 ERSKQDVSLLPENQQA----LKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 E + +S L +N+ + I ++D+ + + V G Sbjct: 124 ENVNERMSFLLKNESKDASEITQIILNVREGYIFTDIEDIIRCEADGNYTMVHLKNGTRQ 183 Query: 174 FTELTLRTLES---RTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYL 230 TL+ E + R H+ +L+NL HL++ D G +++ + + VSRR Sbjct: 184 LASKTLKEFEHILGQNNFWRIHKSHLINLKHLKKYVKGDGG-GNVVMTDNSEIEVSRRNK 242 Query: 231 KSLKEAIGL 239 + + L Sbjct: 243 DAFLKQFNL 251 >UniRef50_C0Z807 Two-component response regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z807_BREBN Length = 261 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 70/247 (28%), Positives = 126/247 (51%), Gaps = 9/247 (3%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 ++K +I+DDEP L L++ DI++ +N +E + + PD+L LDIQMP + Sbjct: 16 LLKTIIIDDEPAICSELEYLLKKYIDIQVDAIYTNPLEALPHMLNSEPDLLMLDIQMPGM 75 Query: 61 SGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +GLE L+ + P IVF TA+ E+A++AF A YL KPI E++L+ + ++R R Sbjct: 76 NGLEFAKTLNQMSNPPLIVFSTAYHEHALEAFSTLAVGYLTKPIMESKLDDVIQKVRTLR 135 Query: 120 SKQDVSLLPENQQAL-KFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELT 178 + ++ + + + ++I + + + F R +YV + E + +L+ Sbjct: 136 KRAAMNDRTATVPLMEEHVCIRKSNKIIPIPVGQIYFAFVREKDLYVATKESIDKC-DLS 194 Query: 179 LRTLESRTP----LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT--VPVSRRYLKS 232 L LE R HR Y++N+ H++EI N + + + +PVSR +K+ Sbjct: 195 LNELEEILNRSRSFFRSHRNYILNVKHIKEIIPWFNHTYLIKMNDDSQTDIPVSRGRMKA 254 Query: 233 LKEAIGL 239 + + L Sbjct: 255 FRGLMNL 261 >UniRef50_A5F9U3 Two component transcriptional regulator, LytTR family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5F9U3_FLAJ1 Length = 237 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 63/237 (26%), Positives = 114/237 (48%), Gaps = 15/237 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K L++DDEP+AR + F+ + +E G C++A+E + + + D++FLDI MP ++ Sbjct: 3 MKCLVIDDEPIARNGIVDFISKIDFLEAAGTCASALEATSYLQEKQIDLMFLDINMPYLT 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GLE + L ++ P ++F TA+ E+A+ + DYLLKPI R + + RQ Sbjct: 63 GLEFLEAL--DNPPLVIFTTAYSEHALDGYRLQVVDYLLKPITFQRFYQASLKARQWHQM 120 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 P+ Q F+ + D+ ++ + + E K T+ + Sbjct: 121 MHA---PKQNQLDPFLYVRQEEGFQKISWVDILYIEGMQNYAKLHFKE-KVIVIHQTMIS 176 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKE 235 LE P R H+ +LVN+ H+ + G+ + G +P+SR ++L + Sbjct: 177 LEETLPAEIFFRIHKSFLVNITHIDSV---SGGRLFIK---GQELPISRTRREALLK 227 >UniRef50_A4C6V8 Two-component system, regulatory protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C6V8_9GAMM Length = 240 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 72/240 (30%), Positives = 126/240 (52%), Gaps = 11/240 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IKV+IVDDE LAR L+ L + S IEI+ E NA E + + +PD +FLDI MP ++ Sbjct: 3 IKVIIVDDERLARNELKRLLAKHSQIEIIDEAKNADEAKEKIAEQKPDAIFLDIHMPGVT 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE-RS 120 GLE+ L + I+F TA+D++A+ AF +A DYL+KP++ RL +++A+L + Sbjct: 63 GLELAETLGDDVN--IIFCTAYDQFAVDAFSLNAMDYLVKPVNPERLAESIAKLEKRVEQ 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 ++ + LP++ + + ++ ++Q+ ++ S + + + GK + +L Sbjct: 121 AKEKTSLPDDHK----LMVKYGEKMRIIQLCEIIRFESIGNHAAIYTPHGK-AYLHSSLN 175 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 +E + R R +V L + + L NG T+ +SRR LK+ + Sbjct: 176 KIEKKLDEANYFRASRSDIVRLDAITSMEQSIGYGLLATLTNGQTIEISRRQATKLKQLL 235 >UniRef50_Q5R0R5 Response regulator of the LytR/AlgR family n=1 Tax=Idiomarina loihiensis RepID=Q5R0R5_IDILO Length = 240 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 13/241 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++V+IV+DE AR L L + +EIV EC++A + I ++ L+PD++ LDI++ +S Sbjct: 10 LRVIIVEDEAPARSKLNTQLAQMEGVEIVAECADAPQAIHDINSLKPDLVLLDIELGELS 69 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G +++ + H +++F TA+ +YA+KAFE+ A DYLLKP D +RL L R+ + + Sbjct: 70 GFDVLEAMK--HPCHVIFTTAYSQYAVKAFEKQALDYLLKPFDLSRLRHALERVVLAQPQ 127 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 + +I +LQ D+ FV + G+ V +E + +L + Sbjct: 128 AAEPATVQ-------FTAKVGDKIRILQSSDIRFVRASQ-GLVVAQCLEREHHLDDSLES 179 Query: 182 LESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKSLKEAIG 238 L ++ P LR HR +VN H+ +I NG L T+ SRR L++ + Sbjct: 180 LLNQLPSSFLRVHRNSIVNTQHIHQIEKWQNGALLLRFEGVNDTITTSRRGAAVLRKYLN 239 Query: 239 L 239 L Sbjct: 240 L 240 >UniRef50_A8F4Q4 Two component transcriptional regulator, LytTR family n=1 Tax=Thermotoga lettingae TMO RepID=A8F4Q4_THELT Length = 223 Score = 209 bits (534), Expect = 5e-53, Method: Composition-based stats. Identities = 73/239 (30%), Positives = 125/239 (52%), Gaps = 20/239 (8%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MIKV I++DE LAR+NL +++ S+ E+VG S E + + DV+FLD+++ Sbjct: 1 MIKVAILEDEQLARDNLEQLIRKYSEFELVGSFSTGRELLRHLKD--IDVVFLDVRLSGE 58 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SGL++ + IVF+TA+ EYA++AFE +A DYL+KP+ E R + + ++ Q S Sbjct: 59 SGLDVSKKIK---STGIVFVTAYPEYAVEAFEVNAIDYLVKPVSEERFSECVEKISQICS 115 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + +L +P I L+ KD+ F+ + + G+ + Sbjct: 116 R-----------SLAKLPVKDFDGILLIDFKDILFIEAFGKKCMACTINGEYEVYHWNIS 164 Query: 181 TLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 LE R P +R H+ Y+ NL H+++I ++ + N +PVS++Y K +K + Sbjct: 165 HLERRLPREFVRVHKSYICNLEHVKKILCSPC--FQIEMENSKLIPVSKKYQKFVKSVL 221 >UniRef50_B9E9A6 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E9A6_MACCJ Length = 236 Score = 209 bits (533), Expect = 6e-53, Method: Composition-based stats. Identities = 72/242 (29%), Positives = 121/242 (50%), Gaps = 11/242 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +++LIVDDEPLAR LR L + +V E + E + ++ ++LFLDI + S Sbjct: 1 MRILIVDDEPLARNELRYLLNNIDNTLVVDEADSVEETLTSLLSETYELLFLDINLIDES 60 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GLE+ ++ +H P IVF TA D +A+KAFE +A DY+LKP ++ R+E L + + Sbjct: 61 GLELAEKINKMKHPPKIVFATAHDSFAVKAFELNALDYILKPFEQKRIEAALNKAK---- 116 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 S+ + L + +IY++ ++D+ + + + + E L Sbjct: 117 --ASSINTNQESKLPTLSIQIDDKIYVINIQDIIALYVEEGQLNIIT-VNSEYAIHEPLS 173 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 E + P +R HR ++N H++ N ++ L + + VSR Y+K K I Sbjct: 174 AFEKKLPENVFMRIHRSSIINKHHIKSAEQWFNHTYQVQLTKDIKLQVSRSYIKQFKHEI 233 Query: 238 GL 239 GL Sbjct: 234 GL 235 >UniRef50_C7PS97 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PS97_CHIPD Length = 244 Score = 209 bits (533), Expect = 7e-53, Method: Composition-based stats. Identities = 62/246 (25%), Positives = 122/246 (49%), Gaps = 17/246 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ LIVDDEPLA E + ++++ ++ G+C A+E + + + D++FLDI+MP+++ Sbjct: 3 LRCLIVDDEPLAHEVILRYMEDVPFLQTAGQCYRAMEALEFLSRQPVDLIFLDIRMPKLN 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLAR------L 115 GL+ + L + P ++ +A++E+A+++FE DYLLKP R K R L Sbjct: 63 GLDFLRTLQQQ--PIVIITSAYEEHALESFELEVCDYLLKPFRFDRFLKAANRALSIYNL 120 Query: 116 RQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFT 175 +Q+ + + ++ L +++ + S + V V + T Sbjct: 121 KQQAGNNTPVAVSATPTEPAALYIKSDKKLIQLNPEELYYFESLGNYVKVW-DASRFVLT 179 Query: 176 ELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKS 232 TL + ES+ P +R H+ Y++N ++ + + L+NG +P+ + Y Sbjct: 180 PRTLSSFESQLPADTFIRIHKSYILNKKFVRYLE-----GNTITLKNGKQLPLGKNYKHQ 234 Query: 233 LKEAIG 238 +K +G Sbjct: 235 VKLLLG 240 >UniRef50_C7MZZ5 Response regulator of the LytR/AlgR family n=3 Tax=Actinomycetales RepID=C7MZZ5_SACVD Length = 255 Score = 209 bits (533), Expect = 7e-53, Method: Composition-based stats. Identities = 77/240 (32%), Positives = 119/240 (49%), Gaps = 9/240 (3%) Query: 5 LIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGLE 64 L VDD P A ++L L+E ++ V + V + + D +FLDI MP + GLE Sbjct: 2 LAVDDVPAALDDLCGMLREAPEVAEVAAAGDTVAALKRLQSEEFDAVFLDIAMPGLDGLE 61 Query: 65 MVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSKQD 123 +L P IVF+TA+D++A+ AF A DYLLKP+ RL LAR+ + S + Sbjct: 62 FASLLKKLARPPAIVFVTAYDQHAVAAFGIGAVDYLLKPVRAERLADALARVSRIVSTEK 121 Query: 124 VSLLPENQ---QALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 P+ Q AL +P R ++ +DV +V + V + +H G + + Sbjct: 122 AGKTPQRQPAPDALAALPVESGGRTRYVRRQDVRYVEAHGDYVRLHTHSG-VHLVRMPIS 180 Query: 181 TLES---RTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 LE +R HR +LV L+ ++E+R + G G VPVSRR+ + L+E + Sbjct: 181 RLEEYWANAGFVRTHRGFLVALSAVRELRSDSVGGLLAHTDLGD-VPVSRRHARHLRERL 239 >UniRef50_A3UEG7 Two-component system regulatory protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UEG7_9RHOB Length = 258 Score = 209 bits (532), Expect = 9e-53, Method: Composition-based stats. Identities = 77/260 (29%), Positives = 123/260 (47%), Gaps = 25/260 (9%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++V DDEPLARE +R L DIEI GE N + I + P+++FLDI+MP++ Sbjct: 1 MRVCFADDEPLARERMRKMLALDEDIEICGEAQNGEDMIALIQAEEPELVFLDIEMPKLD 60 Query: 62 GLEMVGMLDP----EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ 117 G ++V L + P +F TAF A +A++ A D+L KPI ARLE L+R RQ Sbjct: 61 GFDVVEALAQATFRDEPPLFIFATAFPAMAAQAYDTGAIDFLTKPIRPARLELALSRARQ 120 Query: 118 -ERSKQDVSLLPENQQALK--------------FIPCTGHSRIYLLQMKDVAFVSSRMSG 162 RS++ +S L + Q L+ I + + ++ + +VS+ Sbjct: 121 LLRSREAMSRLEKLQSHLEGLRETRSRSSQGPVSIWVSNGGQNIRVEPSQIEYVSAEAEY 180 Query: 163 VYVTSHEGKEGFTELTLRTLES---RTPLLRCHRQYLV-NLAHLQEIRLEDNGQAELILR 218 + + E + ++ E +R HR Y+V +Q G + LR Sbjct: 181 IRLHIGE-RSLLHRQSISAFEEEMAEEGFIRVHRSYIVPARDCIQ-TSRTSWGGLLVHLR 238 Query: 219 NGLTVPVSRRYLKSLKEAIG 238 NG +PV R++ L+ +G Sbjct: 239 NGQVIPVGRKFKDKLQALMG 258 >UniRef50_C9NAB5 Two component transcriptional regulator, LytTR family n=5 Tax=Streptomyces RepID=C9NAB5_9ACTO Length = 303 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 71/250 (28%), Positives = 121/250 (48%), Gaps = 19/250 (7%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAV---------HKLRPDVL 51 M++VL VDDE A E L L+ I + A E + + DV+ Sbjct: 54 MLRVLAVDDEEPALEELLYLLRADPRIRSAEGATGATEALRRIGAAVDAGPDDPSAIDVV 113 Query: 52 FLDIQMPRISGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEK 110 FLDI M ++GL++ +L P IVF+TA + +A+ AF+ A DY+LKP+ RL + Sbjct: 114 FLDIHMAGLTGLDVAQLLAGFAAPPLIVFVTAHEGFAVHAFDLKAVDYVLKPVRRERLAE 173 Query: 111 TLARLRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEG 170 + R+ ++ ++ S+ + A I I + + D+A+ ++ + + G Sbjct: 174 AVRRVAEQVGERTASV---HDAAADQIAVELGGVIRFVPVDDIAYAEAQGDYARLHTSSG 230 Query: 171 KEGFTELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSR 227 + L TLE R +R HR++LV L + E+RL D G + + + VSR Sbjct: 231 -SHLVRIPLTTLEERWRSRGFVRIHRRHLVALNRIDELRL-DAGSMSVRI-GDAELAVSR 287 Query: 228 RYLKSLKEAI 237 R+ +SL++ + Sbjct: 288 RHTRSLRDLL 297 >UniRef50_B0MWM6 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B0MWM6_9BACT Length = 247 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 122/247 (49%), Gaps = 17/247 (6%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+K + +DDEPLA L+ ++ + + +++ +NA+E + D++F+DI MP + Sbjct: 1 MLKCIAIDDEPLALRQLQGYIAKINFLKLEKAFTNAIEAQQYLAGNPIDLIFVDINMPDL 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ--- 117 SG+E V L RP I+F TA+ EYA++ F+ A DYLLKP A +++ + + Sbjct: 61 SGVEFVRSL--VSRPMIIFTTAYSEYAVEGFKLDAIDYLLKPFSFADFNRSVTKAQSLYE 118 Query: 118 ----ERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 +++ DV + ++I + L+++ D+ ++ S V + + Sbjct: 119 LLAYRKTQGDVPAPEATPRDREYISIKADYKTTLVRISDIVYLESEGEYVRLHLDDRSTI 178 Query: 174 FTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYL 230 T L+ +E+ P +R HR Y+VNL ++ + + + + VP+ Y Sbjct: 179 TTLFRLKNMEAALPSEMFMRVHRSYIVNLQRIRSYV-----KGRVFISDSEYVPIGENYR 233 Query: 231 KSLKEAI 237 ++ + I Sbjct: 234 EAFQRYI 240 >UniRef50_C5C1Z4 Two component transcriptional regulator, LytTR family n=18 Tax=Actinomycetales RepID=C5C1Z4_BEUC1 Length = 319 Score = 208 bits (530), Expect = 1e-52, Method: Composition-based stats. Identities = 74/241 (30%), Positives = 117/241 (48%), Gaps = 13/241 (5%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+ VL VDDEP A L L+ + V S+ + + DV LDI+ P + Sbjct: 57 MLTVLAVDDEPPALRELAYLLEADELVGRVLTASDGAAALRLLETQDVDVAVLDIRTPVL 116 Query: 61 SGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 SGL++ +L H P IVF+TA+DE+A+ AF+ A DY++KP R Sbjct: 117 SGLDLARVLARFAHPPAIVFVTAYDEHAVDAFDVRAVDYVMKPYRPE------RLAAAVR 170 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 + E + + I ++ DV FVS+ + + +G E + L Sbjct: 171 RAAAAGAVVEQEADGETIAVELAGVTRFVRRGDVLFVSAHGDYARLHTPQG-EHLVRIPL 229 Query: 180 RTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEA 236 TL R +R HR +LV LAH++E+ D+G +++ G T+PVSRR+ + L+E+ Sbjct: 230 STLAERWVDAGFVRIHRSHLVQLAHVRELH-SDSGHWSVVVA-GQTLPVSRRHARDLRES 287 Query: 237 I 237 + Sbjct: 288 L 288 >UniRef50_C1AAC5 LytT family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AAC5_GEMAT Length = 268 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 82/262 (31%), Positives = 129/262 (49%), Gaps = 26/262 (9%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 +I+ LIVDDEPL R LR L DIEIVGE + + + L PD++FLDIQMPR Sbjct: 4 LIRALIVDDEPLGRRRLRDLLAASPDIEIVGESVDGTAAMADITALAPDLVFLDIQMPRG 63 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SGL++V + P+ P +F+TA D +A++AF+ A DYLLKP + R L R R+ + Sbjct: 64 SGLDVVRAMGPDRMPITIFVTAHDAFALQAFDAAAVDYLLKPFSDERFADALKRARRLIA 123 Query: 121 KQDVSLL--------------------PENQQALKFIPCTGHSRIYLLQMKDVAFVSSRM 160 +D L P L+ I R+ ++ + + ++ + Sbjct: 124 LEDREQLHAQLRSLLDMPSPPADNLPVPNAPAYLERIAVQMRGRMRVVPVGQIDYIVA-- 181 Query: 161 SGVYVTSHEGKE-GFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELI 216 + Y H G E +L+ LE R +R HR +V + + + + +L+ Sbjct: 182 NEPYAELHVGTERYLIRDSLQRLEERLDPARFIRVHRATIVRIDVIDTLLRGEGSDYQLV 241 Query: 217 LRNGLTVPVSRRYLKSLKEAIG 238 LRNG+ + V R ++L+ +G Sbjct: 242 LRNGVRLRVGRSRREALEALLG 263 >UniRef50_C6Y3C9 Response regulator receiver n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6Y3C9_PEDHD Length = 242 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 73/240 (30%), Positives = 129/240 (53%), Gaps = 10/240 (4%) Query: 4 VLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGL 63 VL++DDE R ++ +L+ +D + GECSN +E + ++ L PD++FLDIQMP +G Sbjct: 6 VLVIDDEDHGRVLVKQYLEPYADFFVAGECSNGIEAVKFINMLEPDLIFLDIQMPGANGF 65 Query: 64 EMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS--- 120 E++ + +H P ++F TAFD+YAI+AFE + DYLLKP + R ++T+ARL+ + + Sbjct: 66 EVLQRI--DHVPDVIFTTAFDKYAIRAFEINVIDYLLKPYTKERFDQTMARLKSKPAALP 123 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + + + I R + + D+ ++ + + + E + + Sbjct: 124 QLAMGTFSSPHSYPERIMVEHQKRFKNISVHDIMYLKADGDYTRIYT-EETSFLSSFGIS 182 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 + + +R HR ++NL ++QE+ D G+ L+L NGL + R YL +K I Sbjct: 183 VIAQKFDPAKFVRIHRSVIINLDYVQELYR-DIGKTYLVLDNGLEFNIGRSYLPVIKSFI 241 >UniRef50_A1ZQ18 Transcriptional regulator protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZQ18_9SPHI Length = 248 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 69/246 (28%), Positives = 128/246 (52%), Gaps = 13/246 (5%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQ-SDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 M+K LI+DDE AR L+ L+E IEIVGE + + A+HK +P+++FLDI+MP Sbjct: 1 MLKALIIDDEAKARRILQELLKEYCPQIEIVGEADDVPNAVKAIHKYQPNLVFLDIEMPG 60 Query: 60 ISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +G +++ D I+F TA+ EYAI+AF+ A DYLLKPI L K + ++ + Sbjct: 61 YTGFQLLDFFDT-INFEIIFTTAYREYAIQAFQVSAIDYLLKPIQIELLIKAIEKVEGQL 119 Query: 120 SKQDVSLLPE------NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 S+ ++ + +Q+ + I + +++ + ++++ + + GK+ Sbjct: 120 SEPQINERIDTLKSNLSQEYITRIALPVAEGLLFIEVDQIVYLNAEGAYTQIFLEGGKKV 179 Query: 174 FTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYL 230 +++ E R HR YL+NL +++ +D G +++ N +V ++R Sbjct: 180 LVSKKIKSFEKVLDHPSFFRTHRSYLINLNRVKQYVRQDGGY--IVMDNNDSVNLARERK 237 Query: 231 KSLKEA 236 + +A Sbjct: 238 EDFLKA 243 >UniRef50_A4CHH8 LytTr DNA-binding domain family protein n=5 Tax=Flavobacteriales RepID=A4CHH8_9FLAO Length = 244 Score = 207 bits (527), Expect = 3e-52, Method: Composition-based stats. Identities = 65/248 (26%), Positives = 120/248 (48%), Gaps = 15/248 (6%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSD-IEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 M++ +IVDDE A ++L+ L S+ I +V ++A + + + +PD LFLDI+MP Sbjct: 1 MLEAVIVDDEEKALQSLQWELTNFSNEISVVASFTDAYKALSYLDSNQPDCLFLDIEMPS 60 Query: 60 ISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 + G + + + +V TA+++YAIKA + A DYLLKPID L T+ ++R+ Sbjct: 61 MDGFQFIQKMQ-NSDVAVVITTAYNQYAIKALKNEAIDYLLKPIDSDDLADTITKIRKHH 119 Query: 120 SK-------QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 ++ + + L + K I + ++ L+ D+ + S + + +G + Sbjct: 120 ARGMSAERLERILLNHNATSSHKKITLSTDGKLVFLENDDIIYAESDGNYSTIYLSDGHK 179 Query: 173 GFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRY 229 L+ + P R H +++NL ++E D +IL+ +PVSR+ Sbjct: 180 IVLTKKLKEVGELLPSDTFFRIHNSFIINLNKIKEFLKTDGY---VILKPNHKIPVSRQK 236 Query: 230 LKSLKEAI 237 + I Sbjct: 237 KSDFLDMI 244 >UniRef50_Q3BTS0 Two-component system regulatory protein n=2 Tax=Xanthomonas RepID=Q3BTS0_XANC5 Length = 240 Score = 206 bits (526), Expect = 4e-52, Method: Composition-based stats. Identities = 70/240 (29%), Positives = 114/240 (47%), Gaps = 9/240 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ +IV+D LAR L L+ + ++G + + + PDV+FLDI +P + Sbjct: 8 IEAVIVEDSELARFELEHQLKGYPQLRVLGHADDVDSAVQLIESATPDVVFLDIDLPGGN 67 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 +++ L P I+F TAFD +A+KAF + DYLLKPI+ RL + + +L Sbjct: 68 AFDVLERLSR--VPRIIFTTAFDAHALKAFGYNTVDYLLKPIEPQRLAQAIEKLGD---- 121 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSG--VYVTSHEGKEGFTELTL 179 V+ P + I +L++ +DV + + + VY +H + Sbjct: 122 -AVAAPPVRRAMDSAIFIKDGEHCFLVKPRDVRLIEAVGNYSRVYFQNHAPLLYRPLGAI 180 Query: 180 RTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL 239 T + R R+Y+VNL ++++ NG L LR GL V VSRR +E + L Sbjct: 181 ETQLAPDKFFRASRKYIVNLDFVEQVAPWSNGGLMLTLRGGLEVEVSRRQSARFRELLSL 240 >UniRef50_Q2N6M0 Two-component response regulator n=7 Tax=Sphingomonadales RepID=Q2N6M0_ERYLH Length = 246 Score = 206 bits (526), Expect = 4e-52, Method: Composition-based stats. Identities = 64/241 (26%), Positives = 118/241 (48%), Gaps = 8/241 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ LIVDDEPLA E ++V + + +VG S+ + V L PD++ LD+ MP + Sbjct: 9 LRTLIVDDEPLAVERMQVICAKLPKLNVVGTASDGEAALRLVDALTPDLVLLDMTMPGLD 68 Query: 62 GLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GL + L + P ++F+TA D +A++AF+ A DY+LKP+ + RLE+ + R R Sbjct: 69 GLAVARKLGRLDAPPAVIFVTAHDHFAVEAFDLEAIDYVLKPVAQDRLERAIERAIARRG 128 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + + + L+ + S + ++ V+ + + V + + + T+ Sbjct: 129 EARPE---KESEWLQELWVPHRSELIRIETSQVSRIDAERDYVRLYVGD-RTYLLLQTIA 184 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 LE R +R HR ++ ++ +R + G + L +G + + R YL +K Sbjct: 185 GLEERLDPAEFIRIHRSTILRKDGIRGLRHDGLGVWSVELEDGEALRIGRTYLPKVKAMA 244 Query: 238 G 238 G Sbjct: 245 G 245 >UniRef50_Q8A855 Two-component system response regulator n=1 Tax=Bacteroides thetaiotaomicron RepID=Q8A855_BACTN Length = 228 Score = 206 bits (525), Expect = 5e-52, Method: Composition-based stats. Identities = 61/236 (25%), Positives = 118/236 (50%), Gaps = 16/236 (6%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI +IV+D PLA + L+ F+ + +++ G N ++ + D+LFLDIQM + Sbjct: 1 MINCIIVEDAPLAVDKLKNFISKVPLLDLAGTFDNGLDAFDFLQSNTIDLLFLDIQMEQF 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +GL+++ L RP+I+ ++A+ EYA++ FE DYLLKP R K + +++ E + Sbjct: 61 TGLQLLQAL--HTRPHIIIVSAYGEYAVQGFEYDVTDYLLKPYSFERFLKAVNKVQTEMA 118 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 S P +I R+ + + D+ ++ + + ++V + + T L+ + Sbjct: 119 ----SNPPAQPLPKDYIFLKTEYRMVRINLCDILYIEGKGAYLHVIT-DTTRIMTLLSFK 173 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSL 233 +ES P +R H+ YL+ + + I ++ + +P+ + YLK Sbjct: 174 EIESLLPAKQFIRIHKSYLIAINKIDNIER------NVVKIANMRIPIGKSYLKDF 223 >UniRef50_A6G9H1 LytTr DNA-binding domain family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G9H1_9DELT Length = 267 Score = 205 bits (523), Expect = 8e-52, Method: Composition-based stats. Identities = 91/269 (33%), Positives = 126/269 (46%), Gaps = 36/269 (13%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSD-----IEIVGECSNAVEGIGAVHKLRPDVLFLDIQ 56 ++VLIVDDE AR LR L+ ++ IE+VGE ++ VE + + KL PD++ LDIQ Sbjct: 4 LRVLIVDDEAPARRRLRRMLERLTNDGAEAIEVVGEAADGVEALTQLTKLEPDLVLLDIQ 63 Query: 57 MPRISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR 116 MP + GL + P +F+TAFDE+A+ AFE A DYLLKPI RL+ L R R Sbjct: 64 MPALDGLALAQH---ASLPPFIFVTAFDEHALAAFEVGAADYLLKPIRRERLQLALERAR 120 Query: 117 QERSKQD--------VSLLPENQQALK---------------FIPCTGHSRIYLLQMKDV 153 Q S L E Q L+ I + L ++ ++ Sbjct: 121 TRIEAQRDASAKGEGASELDELQATLRRLVAAEPAPASPTPPRIAAREGGSVRLFELAEI 180 Query: 154 AFVSSRMSGVYVTSHEGKEGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDN 210 S H G E + L LE R +R HR LV+L ++ + E Sbjct: 181 GRFWSADKYTCFH-HGGAEHVLDEGLGELELRLGAHGFVRVHRSELVDLGWVRAVHSE-A 238 Query: 211 GQAELILRNGLTVPVSRRYLKSLKEAIGL 239 G L LR+G V VSRR + +K +GL Sbjct: 239 GATSLELRDGQRVAVSRRMVAEIKRRLGL 267 >UniRef50_C0INH2 Two-component system response regulator protein n=1 Tax=uncultured bacterium BLR12 RepID=C0INH2_9BACT Length = 230 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 65/237 (27%), Positives = 119/237 (50%), Gaps = 16/237 (6%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MIK +IV+DE LA+ ++ +Q+ E+VG CSNA+E + K D++FLDIQ+P + Sbjct: 1 MIKCIIVEDEVLAQHVIQSHVQQTGKFELVGTCSNALEAKEVLDKKEVDLIFLDIQLPGM 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SGL + L P +V TA+ EYA++++E + DYLLKPI R K + ++ R Sbjct: 61 SGLNFLRTLA--TPPLVVLTTAYPEYALESYEFNVIDYLLKPISFERFSKAVNKIVDGR- 117 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + E+ + I +++ + + ++ ++ + + + E + T T+ Sbjct: 118 ---LFTQKESIEQAGHIFIKSNNKFFKVNFSEIIYIEGMKDYLKIYTAEYR-LVTHQTMS 173 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLK 234 +E P +R H+ Y+V LA+++ + I T+P+ Y ++ Sbjct: 174 EMEKILPSKQFMRVHKSYIVALAYVRSV------SGNSIETQKGTIPIGNVYKDNMM 224 >UniRef50_A6ER53 Putative two-component system response regulator n=2 Tax=Bacteroidetes RepID=A6ER53_9BACT Length = 228 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 61/238 (25%), Positives = 114/238 (47%), Gaps = 18/238 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K ++VDDE LARE ++ ++++ + +E V + +E + + + D+LFLDIQMP I Sbjct: 4 LKCIVVDDEELARELIKTYIEKLNHLECVATYESPLEALATIKSSKIDLLFLDIQMPDIK 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E +++ + I+F TA+ EYA+K++E +A DYL+KPI R + + Sbjct: 64 GTEFAELIN-NTKTRIIFTTAYSEYALKSYELNALDYLVKPISFKRFLNAVEKF------ 116 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 + I ++ + +D+ ++ S V G + +L Sbjct: 117 ---PITETANVIDHKIIIKSGYELHKVLTEDIIYIESDSEYVNYHLTNGNKIMANQSLSK 173 Query: 182 LESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 L + P LR HR Y++N + ++ D ++ + + +PVS Y +K + Sbjct: 174 LATSLPEHFLRVHRSYIINTQKVTGLKARD------LMLSDIKIPVSDSYFDIVKSTL 225 >UniRef50_A8UEA9 Two-component system response regulator n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UEA9_9FLAO Length = 234 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 69/240 (28%), Positives = 121/240 (50%), Gaps = 12/240 (5%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 +++ +I DDEP+AR+ L ++ E +E+ C NA E + + K + D+LFLDI MP++ Sbjct: 3 ILQCIIADDEPIARQILENYINEIPYLELKASCKNAFEVLEILQKEQIDLLFLDINMPKL 62 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SGL M+ L + +P ++ TA+ EYA++ FE DYLLKP R + + +++Q+ Sbjct: 63 SGLSMLRTL--QQKPNVIITTAYPEYALEGFELSVTDYLLKPFSIERFLQAVMKVQQKHD 120 Query: 121 KQDVSLLPEN-QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 + + ++ I +I L + ++ + G Y+ K T TL Sbjct: 121 NSVKETITNSIEEEQISIFVKSDKKIIKLDFDAIFYIEAY--GNYIKIFSDKMVLTPQTL 178 Query: 180 RTLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 + P LR H+ Y VN HL+ I +++L N +P+ + Y K++ + I Sbjct: 179 SDFIDKLPNNFLRVHKSYAVNFNHLKLI-----DGNQIVLSNNAKLPIGKSYRKAILKKI 233 >UniRef50_D0LSR9 Two component transcriptional regulator, LytTR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LSR9_HALO1 Length = 240 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 74/242 (30%), Positives = 121/242 (50%), Gaps = 8/242 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++VL+VDDE AR+ L L ++ + +AV + + P+V+ LDI MP I Sbjct: 1 MRVLVVDDEAPARQRLARMLARIPEVGDIAVADSAVAARALLRQSPPEVVLLDIHMPEID 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL ++ + P ++F+TA++++A++AFE A DYLLKP+++ARLEK L R R + Sbjct: 61 GLTLLEL--EPAMPPVIFVTAYEQHAVRAFELAAVDYLLKPVNQARLEKALRRARALGAS 118 Query: 122 QDVSLLPE-NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 +L A + + L + + + + G+E + +L Sbjct: 119 DIAALHGHMRPDAPPRLAARAGEVLRLFDPAQLTRIRAADKYA-IIDMGGEEFVLDDSLT 177 Query: 181 TLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 +LE R +R HR L+NLA ++ + E+ L +G PVSRR L LK + Sbjct: 178 SLEKRLAPHGFVRVHRAELINLAAVRALH-GSGSATEVELSDGQRAPVSRRLLAELKRRL 236 Query: 238 GL 239 GL Sbjct: 237 GL 238 >UniRef50_D2QPM9 Two component transcriptional regulator, LytTR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QPM9_9SPHI Length = 254 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 60/254 (23%), Positives = 123/254 (48%), Gaps = 24/254 (9%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 +++ I+DDE R + ++ + +VG NAV+ + + +++PD++FLD++MP + Sbjct: 3 ILRCYIIDDEAPNRALIEKYIHRLPSLTLVGSQDNAVDALLELPQVQPDLIFLDVEMPEM 62 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G E + +L P RP ++ +TA+ +YA+ FE DYL+KP+ R + + ++ +++ Sbjct: 63 TGFEFLRVL-PSPRPTVIMVTAYPQYAVDGFEHDVIDYLVKPVSFERFFRAVNKILAKQA 121 Query: 121 ----KQDVSLLPENQQALK----------FIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT 166 DV LP + F ++ +++ + F+ S + + Sbjct: 122 STPGSPDVPALPSLAAPSETPTGVSDKDSFFLVKEDKKLVRVELDQIVFIESLKDYLKIY 181 Query: 167 SHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTV 223 G+ T +TL LE P +R +R Y++ ++EI ++ NG+ V Sbjct: 182 L-PGRTILTHMTLTRLEEMLPPDQFVRVNRSYIIRTGSIKEI-----DGNTILTTNGMKV 235 Query: 224 PVSRRYLKSLKEAI 237 P+ Y + + + I Sbjct: 236 PIGVTYREEVMKKI 249 >UniRef50_C7PMC2 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PMC2_CHIPD Length = 258 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 63/254 (24%), Positives = 115/254 (45%), Gaps = 22/254 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQ-SDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 IK +IVDDE + L+ LQ++ ++ ++G ++ E + +L+PDV+FLD++MP Sbjct: 4 IKAIIVDDEQHCIDALQTMLQKKCPEVTVLGGVNSVKEAKELITELQPDVVFLDVEMPHQ 63 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G E++ M D ++F TA+++YA+KA + +A DYLLKP L+ + + RS Sbjct: 64 NGFELLKMFDK-ITFDVIFTTAYEQYALKAIKFNALDYLLKPFSVKELQDAIQKCIARRS 122 Query: 121 KQDVSLLPEN---------------QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYV 165 + PE Q K I + + + ++++ S + + Sbjct: 123 SNTGNGQPEMTTSPIEVFLQNMKTLHQTHKKIALPTINGLVFMPVQNIVRCESTGNYTRI 182 Query: 166 TSHEGKEGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT 222 + K L+ E R H +L+NL +Q + G ++ +G Sbjct: 183 FFTDKKNLMVSRPLKEFEELLTDVDFFRVHNSHLINLQQMQSYIQGEGG--FALMSDGTQ 240 Query: 223 VPVSRRYLKSLKEA 236 V +SRR + Sbjct: 241 VEISRRRKADFLKK 254 >UniRef50_C6W0C7 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W0C7_DYAFD Length = 242 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 57/242 (23%), Positives = 117/242 (48%), Gaps = 12/242 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + + VDDEPLA + F+++ + + G NA++ + + K +++LDIQMP ++ Sbjct: 3 LNCITVDDEPLALGLVSSFVEQTPFLHLHGRYINALDALEVITKENIHLVYLDIQMPELT 62 Query: 62 GLEMVGML--DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 G+E+ +L +P+ R IVF TA++++A++ +E A YLLKP + T + ++ Sbjct: 63 GMELAKVLSQNPDTRTRIVFTTAYNQFAVQGYEVDALGYLLKPFGYNQFLATAMKAKKYF 122 Query: 120 SK-QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELT 178 ++ S PE + ++ ++ + + F+ S V + G + + Sbjct: 123 ENLREASNDPELDSSENYLFVKSDYKLVRIDFDAILFIESFKDYVRIHQANGSPVVSHSS 182 Query: 179 LRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKE 235 L+ +E + P +R HR ++V++ + I + + +PV Y + KE Sbjct: 183 LKAIEEKLPAGKFIRIHRSFIVSVGKVDSI------SKSAVHIGSVDIPVGDLYKDAFKE 236 Query: 236 AI 237 + Sbjct: 237 LL 238 >UniRef50_D2QDN3 Two component transcriptional regulator, LytTR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QDN3_9SPHI Length = 256 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 71/257 (27%), Positives = 126/257 (49%), Gaps = 26/257 (10%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +V+I+DDEP AR+ + F+ + D++ V CSNA++G+ A+ L+PD+LFLDIQMP ++ Sbjct: 5 YRVIILDDEPPARDLIETFVSQLPDLQCVASCSNAIQGLQAIQDLKPDLLFLDIQMPEMT 64 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL+++ L RP I+ TA+ +YA+ ++E DYL+KPI R + + + R++R Sbjct: 65 GLDLMK-LPLTPRPEIILTTAYPQYALTSYEFSVLDYLVKPIAFDRFIRAIVKFREKRQP 123 Query: 122 QDVSL-------LPENQQAL---------KFIPCTGHSRIYLLQMKDVAFVSSRMSGVYV 165 + P + Q I R+ + +++ +V V V Sbjct: 124 ASPPVGWYPIEESPASGQPRTDGVPLPESNSIWLREEKRLLQIPYQEILYVEGLKDYVKV 183 Query: 166 TSHEGKEGFTELTLRTLES---RTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT 222 + + T + L E +R HR ++V L+ ++ I + L NG Sbjct: 184 HL-QHQVIVTHMNLGKAEKLFAPPQFVRVHRSFIVLLSAIRLI-----DGNTITLTNGKQ 237 Query: 223 VPVSRRYLKSLKEAIGL 239 + + Y + LK+ I + Sbjct: 238 LAMGPLYREELKKHISV 254 >UniRef50_D2QEL1 Two component transcriptional regulator, LytTR family n=2 Tax=Spirosoma linguale DSM 74 RepID=D2QEL1_9SPHI Length = 244 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 107/254 (42%), Gaps = 25/254 (9%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI+ + VDDEP A L F Q+ I+++ + E + + + D+LFLDI MP + Sbjct: 1 MIRAIAVDDEPPALRILTHFCQQAGSIDLLKTFTRTDEALTYIEQYPVDLLFLDINMPSM 60 Query: 61 SGLEMVGMLDP-----EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL 115 SG++ + ++F TA+ EYA++ F +A DYLLKP R + + + Sbjct: 61 SGIDFYRAIANVSTVGRQPVMVIFTTAYGEYAVEGFTLNAVDYLLKPFTFERFLQAITKA 120 Query: 116 RQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSH------- 168 Q + ++ ++ + + D+ ++ + + Sbjct: 121 TDVYRWQQ----RADTTTEAYVFVRADYTLHKIALTDILYIEGLDDYLKIHLQPETGKPG 176 Query: 169 EGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPV 225 K +T++++ R P +R HR Y+V L ++ +R + + G +P+ Sbjct: 177 VPKPVVARMTMKSMLERLPAADFVRVHRSYIVPLTRIEAVRNKT------LFVAGRDIPI 230 Query: 226 SRRYLKSLKEAIGL 239 Y + GL Sbjct: 231 GASYEADFLKRFGL 244 >UniRef50_C7PA86 Two component transcriptional regulator, LytTR family n=8 Tax=Bacteroidetes RepID=C7PA86_CHIPD Length = 235 Score = 203 bits (518), Expect = 3e-51, Method: Composition-based stats. Identities = 67/239 (28%), Positives = 124/239 (51%), Gaps = 17/239 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ +I DDEP AR+ L+ ++ + +E+V C +AVE + K + D+LFLDI+MP +S Sbjct: 3 IRCVITDDEPYARKGLQGYISQIDFLELVAVCESAVELNTFLKKEQVDLLFLDIEMPYLS 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+E++ L H P ++F TA+++YA++ +E DYLLKPI R + + + Sbjct: 63 GIELLKTLA--HPPKVIFTTAYEKYAMQGYELEVLDYLLKPISLDRFLRAANKAFDYFNL 120 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 Q+ + + + S++ + ++D+ F + + + + + K+ T LTL+ Sbjct: 121 QE-----QVKPREDYFFIKVDSKLEKVLVEDILFAEGMENYITIHTKQ-KKMITHLTLKM 174 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 L+ P ++ H+ Y+ + + I ++L G VPVSR + + E I Sbjct: 175 LQEHLPADKFIQPHKSYIAAIDKIDAIE------GNVLLLGGYQVPVSRYQKEEIMERI 227 >UniRef50_C6W252 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W252_DYAFD Length = 245 Score = 203 bits (518), Expect = 3e-51, Method: Composition-based stats. Identities = 69/245 (28%), Positives = 121/245 (49%), Gaps = 19/245 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I LIVDDE LAR L ++ + ++ +VG C++A+E G + K R D+L LDIQMP ++ Sbjct: 3 INCLIVDDELLARRLLTDYVGKMPELNLVGTCASAMEAQGYLQKQRIDLLLLDIQMPDVT 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+ ++ L ++P + TA+ EYA++ +E DYLLKPI R + +R + Sbjct: 63 GISLLRSL--PNKPVTILTTAYAEYALQGYELFVLDYLLKPISFERFFQAASRAVEYIGL 120 Query: 122 QDVSLLPENQQAL-------KFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF 174 LP ++A +I +I+ + +D+ + + + + S G++ Sbjct: 121 LGKKALPRYEEARPPHDVPHDYIFVKSDYKIHKIAHRDMDVIEAYGEYILIYSG-GQKIM 179 Query: 175 TELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLK 231 T + LE P +R HR ++VN + + I+ G + G VP+S+ Y Sbjct: 180 TLGQMGKLEQMLPKPGFVRVHRSFIVNFSKIDAIQ---GGTIHV---GGREVPLSKGYRD 233 Query: 232 SLKEA 236 + + Sbjct: 234 AFMQL 238 >UniRef50_Q21DS4 Response regulator receiver n=2 Tax=Alteromonadales RepID=Q21DS4_SACD2 Length = 261 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 75/262 (28%), Positives = 123/262 (46%), Gaps = 29/262 (11%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I +IVDDE AR+ L+ L +I I+ +C N + AVH+L P V+FLDI MP++ Sbjct: 3 INAIIVDDEAHARQALQHLLGTYKEINIIAQCENGKTAVKAVHELEPQVMFLDIHMPKLD 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E++ +L + P VF+TA D+YAI+AFE +A DYLLKP+ E RL +T+ R+ Q + Sbjct: 63 GFEVLELLG-DAAPITVFITAHDDYAIQAFENNALDYLLKPVSEERLARTVERICQRIKE 121 Query: 122 QDVSLLP------------------ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGV 163 +++ P + Q + + ++++ ++ + + V Sbjct: 122 ANLTAQPNPEGEQSQRTTDVVQNYIQRQAPIGRVLVRDKGDVHVISTTNIIAIEAADDYV 181 Query: 164 YVT----SHEGKEGFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN 219 + +H +E + L L R HR ++NL +LQ I E L+ Sbjct: 182 VIHVPGGTHIKQERLSR--LEELLDPQQFCRIHRSTIINLDYLQGIETEGKDTRFANLKT 239 Query: 220 ----GLTVPVSRRYLKSLKEAI 237 +SR L E + Sbjct: 240 PEGEQKQFAISRGGYGKLIEVL 261 >UniRef50_C6W213 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W213_DYAFD Length = 260 Score = 203 bits (517), Expect = 4e-51, Method: Composition-based stats. Identities = 81/256 (31%), Positives = 137/256 (53%), Gaps = 22/256 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSD-IEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 +K +++DDEPLA LR L++ +D IV E N EG+ + + PDV+FLDI+MP + Sbjct: 5 LKTILIDDEPLALSRLRRLLEKHTDTFTIVSEAKNGAEGLVEIDRHHPDVIFLDIEMPLL 64 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G EM+ L P +VF TA+D+YAI+AFEE++ DYLLKP++ RL KT+ ++R Sbjct: 65 NGFEMLSKLTR--MPLVVFSTAYDQYAIRAFEENSVDYLLKPVENDRLMKTIEKIRNITQ 122 Query: 121 KQD-------------VSLLPENQQALKF--IPCTGHSRIYLLQMKDVAFVSSRMSGVYV 165 + + LL E + + + RI L+ M ++ + V++ Sbjct: 123 AGNGHPGSFNPYSENLLRLLEEMKPKKEIFSLSVKTGDRILLIPMTEITHFEAEEKYVFL 182 Query: 166 TSHEGKEGFTELTLRTLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL-- 221 + +G++ TL +LE + P LR R +VN H++EI+ NG+ +++R+ Sbjct: 183 NTLDGQKYLLNYTLTSLEEKLPKHYLRVSRAGIVNSHHIKEIQKHFNGKYVIVMRDRKAS 242 Query: 222 TVPVSRRYLKSLKEAI 237 V Y +++ + Sbjct: 243 QVTSGSTYGDAIRHLL 258 >UniRef50_C7M7B0 Two component transcriptional regulator, LytTR family n=1 Tax=Capnocytophaga ochracea DSM 7271 RepID=C7M7B0_CAPOD Length = 232 Score = 203 bits (516), Expect = 5e-51, Method: Composition-based stats. Identities = 57/239 (23%), Positives = 111/239 (46%), Gaps = 12/239 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + LI+DDEPLAR + +++ S++++VG N+V + K +LFLDI+MP ++ Sbjct: 1 MNCLIIDDEPLARIGMERLVRQYSNLKVVGTFKNSVGVADFLKKNEVHLLFLDIEMPGVN 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL L + ++F TA+ +YA+ ++E A DYL+KPI R +K +A+ Sbjct: 61 GLVFARTLPEQ--TLVIFTTAYSQYALDSYEVDALDYLVKPITLERFKKAIAKAESYHQL 118 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 + I + R Y + D+ ++ + V + + + T + L+ Sbjct: 119 LTQQKTDFEAIDTQCISIRANRRNYRIPHNDILYIEALKDYVIIHTFTDR-YITWINLKN 177 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 + + P +R ++ Y+VN+ H+ + + +P+ R Y + + Sbjct: 178 IHRQLPESVFVRVNKSYVVNIQHVTSY------THQFVYIGETEIPIGRAYQEEFLAQL 230 >UniRef50_B0RWJ0 Transcriptional regulator protein n=11 Tax=Proteobacteria RepID=B0RWJ0_XANCB Length = 258 Score = 203 bits (516), Expect = 5e-51, Method: Composition-based stats. Identities = 69/254 (27%), Positives = 121/254 (47%), Gaps = 22/254 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQ-SDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 ++ +I +DE L R++L L E +++V EC + + + +PDV+FLDI+MP + Sbjct: 4 LRAVIAEDEALLRQSLLALLAEVCPQLQVVAECEDGASALDTIATQQPDVVFLDIRMPGL 63 Query: 61 SGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +G+E+ + R +VF+TA+D+YAI AFE+ A DYLLKPI+ RL+ T R++Q Sbjct: 64 TGIEVARAMREVSPRTQVVFVTAYDQYAIDAFEQGAVDYLLKPINRERLQATWQRVQQRA 123 Query: 120 SKQDVS---------------LLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVY 164 + L ++ + L+ + +VA+ + Sbjct: 124 AAGQPDGAMLESLLQRLAARPAAASAPPPLAWLTASSGRETRLIALDEVAYFQADQKYTT 183 Query: 165 VTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-G 220 V + G E LR L + HR +VN+ + + +D+G+ L LR Sbjct: 184 VMTAAG-EAILRTPLRELLDVLDPHVFKQIHRSTIVNMKAVASVVRDDSGKGRLALRGRS 242 Query: 221 LTVPVSRRYLKSLK 234 T+ VS+ ++ + Sbjct: 243 ETLTVSQPFMSLFR 256 >UniRef50_C6W312 Two component transcriptional regulator, LytTR family n=4 Tax=Flexibacteraceae RepID=C6W312_DYAFD Length = 240 Score = 203 bits (516), Expect = 6e-51, Method: Composition-based stats. Identities = 60/245 (24%), Positives = 123/245 (50%), Gaps = 16/245 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K ++VDDEP A E L +L ++IE+ C +A++ + + + D++FLD++MP + Sbjct: 3 LKAILVDDEPHAIEILDNYLANFAEIEVAARCQDAIQAFQVLQQQKIDLMFLDVKMPGLK 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ--ER 119 G +++ L + P +VF TA+ +YA++ F+ +A DYLLKPI R + + ++ Sbjct: 63 GTDLLRSLK--NPPKVVFTTAYQDYAVEGFDLNAVDYLLKPIPFERFLRAMDKVFTGLNI 120 Query: 120 SKQDVSLLPENQQALK--FIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL 177 + Q VS+ + QA + F+ ++ + + D+ ++ S + V + K ++ Sbjct: 121 TNQSVSVAQKAAQATQDVFLYLKVDRKMVKVNVNDIYWIESLRDYIKVVLKD-KALISKQ 179 Query: 178 TLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLK 234 + LE P +R HR ++V++ ++ + +G +P+ R + + Sbjct: 180 KISLLEELLPEDGFIRIHRSFIVSVDKVESYHSHK------LEIDGKELPIGRNFRNDCQ 233 Query: 235 EAIGL 239 L Sbjct: 234 RRFKL 238 >UniRef50_C6VU69 Two component transcriptional regulator, LytTR family n=2 Tax=Sphingobacteriales RepID=C6VU69_DYAFD Length = 235 Score = 203 bits (516), Expect = 7e-51, Method: Composition-based stats. Identities = 69/242 (28%), Positives = 114/242 (47%), Gaps = 14/242 (5%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M++ +I+DDEPLAR L FLQ+ S I +NA + + + DVLFLDI+MP + Sbjct: 1 MLQCVIIDDEPLARGILEEFLQK-SGITGAASFANARDALAHLQTHETDVLFLDIEMPEM 59 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ-ER 119 +G++ + L P VF TA+ YA + +E D+LLKPI AR L ++R + Sbjct: 60 NGIDFLKSLA--QPPVTVFTTAYRGYAFEGYELGVIDFLLKPISYARFGHALDKVRDFLQ 117 Query: 120 SKQDVSLLPEN--QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL 177 K+ + L +N ++ FI + L D+A++ + + GK Sbjct: 118 LKEQNTNLEQNLTEEKPDFIFVKSGVQRVRLAFDDIAYIQGLKDYAIIHTGAGKVVIKGS 177 Query: 178 TLRTLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKE 235 LE P LR H+ ++V + ++ I I+ +P+ R Y + + + Sbjct: 178 VKAMLEIFPPARFLRVHKSFIVGIDKIRRIERNR------IVWGNHQIPIGRNYREEVMQ 231 Query: 236 AI 237 I Sbjct: 232 VI 233 >UniRef50_C6VTD2 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VTD2_DYAFD Length = 261 Score = 202 bits (515), Expect = 8e-51, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 122/257 (47%), Gaps = 28/257 (10%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ +IVDDE AR + ++Q+ +EI G +A + + + +++PD++FLDI+MP ++ Sbjct: 7 LRCIIVDDEADARRLIEKYVQKVPFLEIAGFAESATDALYLIREMKPDIIFLDIEMPEMT 66 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E++ +L P RP ++ +TA YA++ +E DYLLKP+ R K + ++ R Sbjct: 67 GFELLKLL-PAARPAVIMITADPSYALEGYEHELTDYLLKPVSFERFLKAVNKVDNARVP 125 Query: 122 QDVSLLPENQQAL------------------KFIPCTGHSRIYLLQMKDVAFVSSRMSGV 163 + + E+ + L F+ + ++ + ++ F+ + Sbjct: 126 KYLQATNESVRELGSQAKQSTEQAEAAGFTSDFLLLKENKKLIKVSPGEIHFIEGMRDYL 185 Query: 164 YVTSHEGKEGFTELTLRTLES---RTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG 220 + + + +T+ +E + LR +R Y+VN ++EI E+ +G Sbjct: 186 KLYWSD-RVAVIHMTMSKIEEALSPSQFLRVNRSYIVNKKVIREIE-----GNEITTNSG 239 Query: 221 LTVPVSRRYLKSLKEAI 237 +P+ Y ++ + Sbjct: 240 RKIPIGITYRANVLAVL 256 >UniRef50_Q3IEB4 Putative alginate biosynthesis regulatory protein n=2 Tax=Alteromonadales RepID=Q3IEB4_PSEHT Length = 233 Score = 202 bits (515), Expect = 8e-51, Method: Composition-based stats. Identities = 72/240 (30%), Positives = 121/240 (50%), Gaps = 12/240 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + ++IVDDEPLAR L L Q +I + E SN E + +PD++FLD+ MP I+ Sbjct: 1 MNIVIVDDEPLARARLVRLLAAQ-NIVVQNEASNGTEALALSKVNQPDLVFLDVDMPGIN 59 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GLE+ L+ P IVF+TA E+A+ A + +A YL+KP+ L+K + +L Sbjct: 60 GLEVASELNKLAVPPAIVFITAHPEHALDALQLNAAGYLVKPVSAQSLQKVVEQL----- 114 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 ++ + +Q I + ++M+ + + ++ + G E +L+ Sbjct: 115 -GRLNKVHIQKQQTTKITYQLAGTLKSIEMECIYYFTAEEKYTKMVFK-GGSALIEQSLK 172 Query: 181 TLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT-VPVSRRYLKSLKEAI 237 LE+ P +LR HR LVN + + +G + L+N + VSRR LK++K + Sbjct: 173 QLETLYPTHVLRVHRNTLVNKNKVVALHSLSSGSHAIELQNCQELLAVSRRELKTVKSTL 232 >UniRef50_D2QI00 Two component transcriptional regulator, LytTR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QI00_9SPHI Length = 235 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 121/239 (50%), Gaps = 12/239 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ L++DDE A L+ ++++ + +VG C +A+E I +H+ D+LFLDI MP+++ Sbjct: 5 LRCLLIDDEAAAHYVLQHYIEQVDRLTLVGNCYHALEAINFLHRQPIDLLFLDINMPQMN 64 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL+M+ L H P ++ TA E+A++++ + DYLLKPI+ AR K + ++ +S Sbjct: 65 GLQMLETLT--HPPRVILTTAHSEFALESYNYNVVDYLLKPIEFARFLKAVDKVVVTQSD 122 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 ++ L A L D+ +V S + V + + + T LT+ Sbjct: 123 EETQPLSLLTPAGASFVIKVDGDWVRLAYSDLLYVQSWGNYVKLFT-TNQIYVTALTMTE 181 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 LE R P +R H+ YLV L ++ + + + ++P+ Y + L E + Sbjct: 182 LEQRLPAEQFIRIHKSYLVALHSIKRL------SGNEVFISETSLPIGSTYRRELVERL 234 >UniRef50_D2QJ93 Two component transcriptional regulator, LytTR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QJ93_9SPHI Length = 224 Score = 201 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 62/241 (25%), Positives = 122/241 (50%), Gaps = 20/241 (8%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+ L+V+DEPLAR+ + ++ + +D+ +V C++A E + D++FLDI++P + Sbjct: 1 MMNCLVVEDEPLARQVVETYIHQSADLRLVKSCTHAFEAFEVLTAYPVDLMFLDIELPSL 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G++ + L P ++F TA+ +YA++++E A DYLLKPI R ++++ + + + Sbjct: 61 TGIDFIRRLK--QPPALIFTTAYSDYAVESYELEAVDYLLKPITYERFKQSVDKFFKRTA 118 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + + ++ L+ D+ + S + + + E + LT++ Sbjct: 119 PPPTAAT--------YSYFKVDGQLVKLEHGDIVYAQSIKDYILLKTAE-RSFIVHLTMK 169 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 L P R HR YLVNLAH+ ++ +D I +T+P+ Y L + + Sbjct: 170 GLSELLPEGQFRRIHRSYLVNLAHVTKVSRQD------IQLGAITLPIGESYRGLLNDFL 223 Query: 238 G 238 Sbjct: 224 N 224 >UniRef50_A0LTS8 Response regulator receiver protein n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LTS8_ACIC1 Length = 249 Score = 201 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 76/240 (31%), Positives = 120/240 (50%), Gaps = 10/240 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + VL VDDEP A + L L++ + + +A E + + DV+FLD+ MP + Sbjct: 5 LSVLAVDDEPPALDELVYSLRQCPAVGTIYAAHDAAEALRCLEHDDVDVVFLDVVMPGLD 64 Query: 62 GLEMVGMLDPEHR-PYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GLE+ G+L+ R P +VF+TA ++YA+ AF A DY+LKP D RL LAR+ S Sbjct: 65 GLELAGVLNRFARAPAVVFVTAHEKYAVAAFGVQAVDYVLKPFDVHRLSAALARVTGRTS 124 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + ++ + + R L+ +V +V + V V +H+G + L Sbjct: 125 TAN----RDSGEQFATLAADLPGRTVLIDRSEVEWVEAAGDYVRVHTHDGHSYLVRVPLA 180 Query: 181 TLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 L R R HR +LV L ++EI D + +L G +PVSRR+L+ +E + Sbjct: 181 VLAERWEPHGFARIHRSHLVALRAVREIATRDGQTS--VLVGGHHLPVSRRHLRDFRERL 238 >UniRef50_A6EI22 Response regulator n=1 Tax=Pedobacter sp. BAL39 RepID=A6EI22_9SPHI Length = 249 Score = 201 bits (512), Expect = 1e-50, Method: Composition-based stats. Identities = 68/247 (27%), Positives = 122/247 (49%), Gaps = 13/247 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQ-SDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 IK +IVDDEP +R NLR L E D+E++ E +A + + +PD+LFLDI+M I Sbjct: 3 IKSIIVDDEPKSRSNLRQLLTEYCPDVEVIAEAGSATSALVMIAAHQPDLLFLDIEMGEI 62 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SG +++ +L + R ++F+TAFD+Y I+A + A DYLLKPI+ L + + ++ Sbjct: 63 SGFDLLKLLHGKQRFELIFVTAFDKYGIQAVKACAIDYLLKPINIIELSTAVDKAIKQIG 122 Query: 121 KQDVSLLPE-------NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 + +L + + + I +I + + + + + + + + K Sbjct: 123 PKKENLRLKELVANIDRRIDEQKIAVPLADKIEFIAVSRIIRLEAEGNYTHFYLDDRKHL 182 Query: 174 FTELTLR---TLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYL 230 TL+ L R +R H+ +L+N + D G + + +G VP+SR+ Sbjct: 183 LICKTLKDYQELLERHHFIRTHQSHLINFHRISAYVKTDGGY--IAMEDGSQVPISRQKK 240 Query: 231 KSLKEAI 237 + + I Sbjct: 241 EEVLAKI 247 >UniRef50_A6EIX0 Two-component system response regulator n=1 Tax=Pedobacter sp. BAL39 RepID=A6EIX0_9SPHI Length = 235 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 51/240 (21%), Positives = 111/240 (46%), Gaps = 12/240 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K ++VDDE A E L +++ S + V C +++E + + + D++FLDIQMP I+ Sbjct: 1 MKCILVDDERPALELLEDNVKQISYLRPVASCRSSLEALEVLRTQQVDLMFLDIQMPGIN 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GLE++ + P ++ +TA++ +A+ F DYL+KP+ R K + + + Sbjct: 61 GLELLRSIK--QPPMVILITAYETHALDGFNLDVVDYLVKPVPFPRFLKAVEKAHERFQF 118 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 + + P + + + + + ++D+ ++ V + T + ++ Sbjct: 119 RQPEIKPVTVEQ-DHVFVNANYALVKVSLQDITYIEGLKDYVRIHVGNDHPVVTRMAMKG 177 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIG 238 +E R +R H+ ++V L + ++ +L G+ +P+ Y L + Sbjct: 178 IEERLNTGRFMRVHKSFIVALDKITSVQKTQ------LLVAGVEIPIGEGYRHKLLAYVS 231 >UniRef50_C6XVI3 Response regulator receiver n=2 Tax=Sphingobacteriales RepID=C6XVI3_PEDHD Length = 245 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 63/238 (26%), Positives = 114/238 (47%), Gaps = 18/238 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ LIVDDEP A E ++ + +IEIV C+NA++ + V + D++FLDI+MP ++ Sbjct: 3 IRTLIVDDEPHALEIIKKYAVNVPEIEIVDTCNNALKALQFVQHTKIDLVFLDIKMPGLT 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G +++ L P I+F TA+ EYAI FE +A DYLLKP+ R + + ++ Q + Sbjct: 63 GTDLIRGLK--TPPMIIFTTAYQEYAIDGFELNAIDYLLKPVPLERFLRAIDKVMQFING 120 Query: 122 QDVSLLPENQQAL------KFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFT 175 + + L F+ ++ + +D+ ++ S + V + + K T Sbjct: 121 DKNRRHLKEPEGLATAAPTHFLYLRIERQLVKVDTRDILWIESVKDYIKVVTTD-KTFQT 179 Query: 176 ELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYL 230 + + E P +R HR +++ + ++ G +P+ R Y Sbjct: 180 KQKISIAEKLLPIGEFMRIHRSFIIPVNKTDAYHP------NYMIIAGNKIPIGRNYK 231 >UniRef50_Q1VYF8 Two-component system response regulator protein n=2 Tax=Flavobacteriaceae RepID=Q1VYF8_9FLAO Length = 241 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 67/245 (27%), Positives = 117/245 (47%), Gaps = 22/245 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K LIVDDEPLA ++ + S ++IV EC +A E I +++ + D++FLDI MP++ Sbjct: 1 MKCLIVDDEPLAHRIIKNYCNNLSFLDIVKECHSAFEAINYLNENQVDLIFLDINMPKLK 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL+ + L + P I+ +A+ EYA++ +E + DYLLKP R K + + ++ Sbjct: 61 GLDFLRTLS--NPPLIIITSAYQEYAMEGYELNILDYLLKPFSFERFLKAINKAVSQKKL 118 Query: 122 QDVS----------LLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGK 171 D S + N + + I G + + +Q + ++ S S V + E + Sbjct: 119 LDTSEKTPNIKVTPVSLPNNENQESIFIKGDKKTHQVQFDSILYLESIGSYVKIHL-ENE 177 Query: 172 EGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRR 228 + L E++ P LR HR Y++ + + I + N +PV Sbjct: 178 TIISLDRLTNFENKLPKNIFLRIHRSYIIAIKKVNTIE------GNRVKINKKEIPVGSV 231 Query: 229 YLKSL 233 Y +L Sbjct: 232 YKHNL 236 >UniRef50_A6G241 Response regulator receiver protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G241_9DELT Length = 239 Score = 200 bits (510), Expect = 3e-50, Method: Composition-based stats. Identities = 85/240 (35%), Positives = 126/240 (52%), Gaps = 12/240 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++VLIVDDE AR LR + + +E+ GE ++A + + R DV+ LDI MP +S Sbjct: 5 LRVLIVDDETPARRRLRRACERVAGVEVAGEATDAATLRRVLTRDRADVILLDIAMPGLS 64 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+E+ P I+F TA E+A++AF A DYLLKPI E L LAR+R Sbjct: 65 GIELAR---EPGLPPIIFTTAHSEHALEAFRVDAVDYLLKPISEHALALALARVRARVPT 121 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 Q S+ + S + + ++V+ + + V V +G+E + +L T Sbjct: 122 QTPSV----SHTPPRLATRTGSLLRVFDAREVSHL-ASTDRVVVFWIDGQEMILDESLNT 176 Query: 182 LESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIG 238 LE+R LR HR LVNL + +R +++G A L LR+G VPVSRR L +K + Sbjct: 177 LEARLRGHDFLRVHRSALVNLTFVSAMRFDEDGAA-LQLRDGTVVPVSRRLLPEVKRRLS 235 >UniRef50_A7T6N4 Predicted protein n=4 Tax=cellular organisms RepID=A7T6N4_NEMVE Length = 237 Score = 200 bits (510), Expect = 3e-50, Method: Composition-based stats. Identities = 60/239 (25%), Positives = 112/239 (46%), Gaps = 12/239 (5%) Query: 3 KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 +IVDDEP+AR+ L F+++ +++V C NA+E ++ + D+ FLDI MP ISG Sbjct: 6 TCIIVDDEPIARDILISFIEKIPSLQLVKSCKNAMEAFEVINTEKVDLFFLDIHMPEISG 65 Query: 63 LEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSKQ 122 L + ++ + ++F TA+ YA++ F A DYLLKPI R + + + + Sbjct: 66 LSLAKIVPKSAK--VIFTTAYRGYAVEGFNLKAVDYLLKPIAFERFLEAVNKFFETNKSN 123 Query: 123 DVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRTL 182 L + F ++ + ++ F+ S + + E K T T+ + Sbjct: 124 TPVLEQIKNEQTNFFFVRSDRKMVRVNFAEILFIESVGDYIKIYLKE-KIIVTRETITNI 182 Query: 183 ESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIG 238 E++ +R HR ++ L ++ E + N +P+SR+Y ++ + Sbjct: 183 EAKLSHIDFIRTHRSFIAGLRFIESYTNEF------VEINKKAIPISRKYKDAVLNKLN 235 >UniRef50_A5FL89 Transcriptional regulator, LytR/AlgR family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FL89_FLAJ1 Length = 229 Score = 200 bits (509), Expect = 4e-50, Method: Composition-based stats. Identities = 73/238 (30%), Positives = 118/238 (49%), Gaps = 20/238 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I +IVDDEPLA + L + + ++ +VG NA+E D++FLDIQMP ++ Sbjct: 3 IDCIIVDDEPLAIKLLENHISKIEELRLVGTAGNALEAYKLTKLKTVDLIFLDIQMPDLT 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G++ + L ++P +F TA+ E+A++ FE A DY+LKPI R K + R+ + Sbjct: 63 GIDFLKSLK--NKPKTIFTTAYREFAVEGFELEAVDYILKPITFDRFFKAVERVL----R 116 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 D + E+ F+ + Y + +K + F S+ + V V K + L Sbjct: 117 HDSDYVKED-----FLMLKSNGLQYKINLKSILFFESQGNNVKVVLKNEKPLIVKYKLSD 171 Query: 182 LE---SRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEA 236 LE S +R HR ++VN + + G ELI+ N +VPV R Y + +E Sbjct: 172 LENDLSSLGFVRIHRSFIVNSKEINAL-----GNTELIIEN-FSVPVGRSYKSNYEEL 223 >UniRef50_Q7P1K6 Probable two-component system, regulatory protein n=1 Tax=Chromobacterium violaceum RepID=Q7P1K6_CHRVO Length = 242 Score = 200 bits (509), Expect = 4e-50, Method: Composition-based stats. Identities = 72/246 (29%), Positives = 116/246 (47%), Gaps = 20/246 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ L+VDDE LA + LR L + +E V ++ + + + DVL LDI MP + Sbjct: 7 LRALVVDDEALACDRLRQLLAD-CGVEQVDCLADGQAALDWLARHPVDVLLLDISMPGLD 65 Query: 62 GLEMVGMLDPEH-RPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+ + L + P +VF TA D +A++AFE A DYLLKP+ RLE+ L R R Sbjct: 66 GISLARQLRQQALAPALVFSTAHDHFAVEAFELDAADYLLKPVRRERLEQALRRALARRQ 125 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 Q + R+ + D ++ + + V + + + E + L Sbjct: 126 GQPQT----------SFTVRQRGRLLNVPFADARYLKAELKYVTLVTPD-SEYLLDDALV 174 Query: 181 TLESRTP--LLRCHRQYLVNLAHLQEIRL----EDNGQAELILRN-GLTVPVSRRYLKSL 233 LE R LR HR LV +QE+ + + Q + LR+ +PVSRR + +L Sbjct: 175 ALEQRLGDSALRIHRNCLVMRHAVQELCRGGENDGDEQWIVRLRDIPAPLPVSRRQIHAL 234 Query: 234 KEAIGL 239 + A+ + Sbjct: 235 RAALSV 240 >UniRef50_Q8E7H3 Sensory transduction protein lytR n=8 Tax=Streptococcus agalactiae RepID=LYTR_STRA3 Length = 246 Score = 199 bits (508), Expect = 5e-50, Method: Composition-based stats. Identities = 72/247 (29%), Positives = 128/247 (51%), Gaps = 10/247 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEI--VGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 +K+LI+DDE AR+ L ++ +++ + + + E + + + D++FLDI + Sbjct: 1 MKILILDDEMFARQELSFLVEHSQEVDNPEIFQAEDISEAEKILFRQQIDLIFLDISLSE 60 Query: 60 ISGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR-- 116 +G + L H P +VF TA+D YA+KAFE +A DY++KP ++ R++ L++++ Sbjct: 61 ENGFTLANQLSQLAHPPLVVFATAYDNYAVKAFESNAVDYIMKPFEQQRVDMALSKVKKL 120 Query: 117 -QERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFT 175 Q + DV + +++ + T R +++M+D+ +S G S K Sbjct: 121 SQLTTASDVEQAIPKKASVELLTLTLSDRSVVVKMQDIV-AASVEDGELTVSTVQKTYTI 179 Query: 176 ELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKS 232 TL +SR L+ HR ++NL ++EI+ N LI+ NG PV R YLK Sbjct: 180 RKTLNWFKSRAVAPYFLQIHRNTVINLEMIEEIQPWFNHTLLLIMSNGEKFPVGRSYLKD 239 Query: 233 LKEAIGL 239 L E + + Sbjct: 240 LNEHLTM 246 >UniRef50_B9MFI3 Two component transcriptional regulator, LytTR family n=10 Tax=cellular organisms RepID=B9MFI3_DIAST Length = 276 Score = 199 bits (508), Expect = 5e-50, Method: Composition-based stats. Identities = 80/271 (29%), Positives = 124/271 (45%), Gaps = 38/271 (14%) Query: 3 KVLIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + LI +DEPL LR LQ+ +E+ + + + LRPDVL LDI+MP S Sbjct: 7 RALIAEDEPLLAAALRHELQQAWPALEVAASVGDGLSAVREALALRPDVLLLDIRMPGQS 66 Query: 62 GLEMVGMLDPEHR-----PYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR 116 GLE L P +VF+TA+D+YA++AFE A YLLKP+ ARL +T+ RL+ Sbjct: 67 GLEAAAELADAWPDSAAFPALVFVTAYDQYAVQAFEAQAVGYLLKPVQPARLRQTVQRLQ 126 Query: 117 QERSKQ-DVSLLPENQQA--------------------------LKFIPCTGHSRIYLLQ 149 Q +++ LP +QA L+ I + ++I+L+ Sbjct: 127 QLLAQRGAPGALPALEQALTQLRALAQAPGLGGSVRPPAGGGAPLRMIQASSGTQIHLVP 186 Query: 150 MKDVAFVSSRMSGVYVTSHEGKEGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIR 206 +++V + + V V + E +E L+ L + + HR LV A + Sbjct: 187 VQEVVYFEAADKYVRVLTAE-REYLIRTPLKELAGQLDPADFWQVHRGTLVRAAAIASAV 245 Query: 207 LEDNGQAELILRNG-LTVPVSRRYLKSLKEA 236 ++ G+ L LR + VSR Y K Sbjct: 246 RDEAGRMHLQLRGRPERLAVSRLYAPLFKAM 276 >UniRef50_B2V8S8 Two component transcriptional regulator, LytTR family n=3 Tax=Sulfurihydrogenibium RepID=B2V8S8_SULSY Length = 245 Score = 199 bits (508), Expect = 5e-50, Method: Composition-based stats. Identities = 71/246 (28%), Positives = 128/246 (52%), Gaps = 9/246 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + V IV+DEP+ARE L L+E ++ IVG + + + + DVLFLDI++P + Sbjct: 1 MNVFIVEDEPIARERLIRLLKEIGNVNIVGVADSKEKALSEMKDKEIDVLFLDIKLPDGT 60 Query: 62 GLEMVGMLDP--EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR--Q 117 GLE+ + ++ PYI+F TA ++A+ AF+ +A DYLLKP + +EK L +++ + Sbjct: 61 GLEIAKEVIEGMDNPPYIIFATANGDFALDAFKANAIDYLLKPFTKEDVEKALEKIKNIE 120 Query: 118 ERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL 177 +S + IP S+I LL+ D+ ++ + +S + + + KE + Sbjct: 121 NKSFNLAKIATITTNTEILIPVKHLSKIVLLKPDDIYYIKAELSETVIRTKD-KEYISNR 179 Query: 178 TLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKSL 233 L E R H+ YLVNL ++E++ + + + ++ T+ SR K L Sbjct: 180 KLYEFEDILKYIGFFRVHKSYLVNLTKIKEMKSVEQSKFLITFQDIPDTLKTSRDGAKYL 239 Query: 234 KEAIGL 239 ++ + + Sbjct: 240 RDYLNI 245 >UniRef50_C2G2I4 Response regulator n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G2I4_9SPHI Length = 246 Score = 199 bits (508), Expect = 5e-50, Method: Composition-based stats. Identities = 68/248 (27%), Positives = 122/248 (49%), Gaps = 16/248 (6%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI V+I++DE + + + L +SD +VG N + ++ RPDV+ +DIQ+ Sbjct: 1 MITVVIIEDEAVIEKEIVDLLSGESDTRLVGSSDNVSSAVQLINMHRPDVILMDIQLRDG 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 + +++ +LD + IVF+TA+D++AI+A + A DYLLKPID + + R R Sbjct: 61 TAFDIIRLLDYTPQ-NIVFITAYDQFAIRAIKCGALDYLLKPIDHSEFRQAFERYRTRNK 119 Query: 121 KQD--------VSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 L+ +QQ + I +++ ++ ++D+ + Y + G+E Sbjct: 120 DIQSGLQLSLMQQLMEASQQIPEHIALPSLNQVRIITVQDIMYCRGEGPYTYFYLNNGEE 179 Query: 173 GFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRY 229 L+ E LR H+ YLVN ++ + ++ LIL+N VPVS R Sbjct: 180 ELVSKPLKYYEELLQTPFFLRTHQSYLVNRRYISGVSSSED----LILKNQQQVPVSARR 235 Query: 230 LKSLKEAI 237 K++ + + Sbjct: 236 KKNILQLL 243 >UniRef50_C6XUE8 LytTr DNA-binding region n=2 Tax=Pedobacter RepID=C6XUE8_PEDHD Length = 259 Score = 199 bits (508), Expect = 5e-50, Method: Composition-based stats. Identities = 70/254 (27%), Positives = 119/254 (46%), Gaps = 18/254 (7%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQS-DIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 M+ +IVDDE AR +L LQE ++ I G + E + + D++FLDI MP Sbjct: 1 MLNTIIVDDEEFARSSLYFLLQENCGEVHISGIAKSVAEARNLLTQHAVDLIFLDIAMPG 60 Query: 60 ISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR--- 116 +G E++ + +I+F TA+D+YA+KA + +A DYLLKPID L+ +A+ Sbjct: 61 ENGFELIPYAQSNNA-HIIFTTAYDQYALKAIKANALDYLLKPIDIDELKIAVAKAVRFI 119 Query: 117 --------QERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSH 168 + S Q +++ + ++ I L+ + D+ +++ + Sbjct: 120 ALNKKENNRNESLQSLAVNLAERNEIRKISLPNGQGYSLVNIDDIIHIAADSNYSVFYFA 179 Query: 169 EGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPV 225 + L+ E P +R H+ +VNL +L+E E+IL+NG + V Sbjct: 180 NKDKITVSKVLKEYEEILPDHQFVRIHKSSIVNLNYLKEYN--SKNGLEVILKNGEKIAV 237 Query: 226 SRRYLKSLKEAIGL 239 SRR E + L Sbjct: 238 SRRRASEFVEKVKL 251 >UniRef50_C6IC21 Two-component system response regulator n=14 Tax=Bacteroidetes RepID=C6IC21_9BACE Length = 232 Score = 199 bits (507), Expect = 6e-50, Method: Composition-based stats. Identities = 63/240 (26%), Positives = 119/240 (49%), Gaps = 18/240 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ IVDDEPLA L ++ + +E+ G+ S+AV+ + + + D+LFLDIQMP ++ Sbjct: 3 LRCAIVDDEPLALSLLESYVNKTPFLELAGKYSSAVQAMKELPGNQIDLLFLDIQMPELN 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GLE M+ P R IVF TAF +YAI + +A DYLLKPI + + Q Sbjct: 63 GLEFSKMVSP--RTRIVFTTAFGQYAIDGYRVNALDYLLKPISYVDFLQATNKALQWFE- 119 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEG-KEGFTELTLR 180 L + + + I ++ +++K + ++ + + + + K + ++++ Sbjct: 120 -----LVQKPEEVDSIFVKSDYKLVQVELKKILYIEGLKDYIKIYTEDAPKPILSLMSMK 174 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 ++E P +R HR ++V ++ I I+ + +PVS Y ++ + + Sbjct: 175 SMEELLPPARFMRVHRSFIVQKDKIRIIDRGR------IVFDKTYIPVSDSYKQTFQTFL 228 >UniRef50_A1ZFR4 Two-component system response regulator protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZFR4_9SPHI Length = 243 Score = 199 bits (507), Expect = 7e-50, Method: Composition-based stats. Identities = 65/248 (26%), Positives = 131/248 (52%), Gaps = 21/248 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K L+VDDEPLA + ++ ++ + +E+VG C NA+E + +++ D++FLDIQMP ++ Sbjct: 3 LKCLLVDDEPLAHKIIQNYIARLNTLEVVGSCYNAIEALNFLYEHEVDLMFLDIQMPELN 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL+M+ L H P ++ TA+ E+A++++E DYLLKPI R K + R+ + S+ Sbjct: 63 GLDMLKTL--PHSPKVILTTAYTEFALESYEFGVVDYLLKPIAFPRFLKAVNRVIDDSSE 120 Query: 122 QDVSLLP---------ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 S P N+ ++ + + + + ++ F+ + + + + + K Sbjct: 121 LQRSEKPPVINQQYSNANESLNGYLFLKENQVTHKVFLNNILFIQAYGNYLKFFTED-KM 179 Query: 173 GFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRY 229 T++ + ++ P +R H+ Y+V+L+ + +I Q ++I T+PV +Y Sbjct: 180 IMVADTMKNIMAQLPESDFVRVHKSYIVSLSKIDQIE---GNQIKII---NHTLPVGNKY 233 Query: 230 LKSLKEAI 237 ++ Sbjct: 234 RLVFEQKF 241 >UniRef50_A8UPH3 Response regulator n=2 Tax=Bacteroidetes RepID=A8UPH3_9FLAO Length = 252 Score = 199 bits (507), Expect = 7e-50, Method: Composition-based stats. Identities = 62/250 (24%), Positives = 122/250 (48%), Gaps = 15/250 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQS-DIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 ++ +IV+DE +RE+L+ L E +IE+VG +N + + + +PDV+FLDI++ Sbjct: 3 LRAVIVEDEKHSRESLKSLLHEFCINIEVVGLAANVNDAVETIKSKKPDVIFLDIELQTG 62 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR---- 116 +G +++ + +VF TAF++YAIKA + + DYLLKPID L+ + + + Sbjct: 63 TGFDILQQVS-HLNFEVVFTTAFEQYAIKAVKFSSLDYLLKPIDIEELQNAVNKAQTIKN 121 Query: 117 ----QERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 +++ + + L + + L I +++KD+ + + S ++ Sbjct: 122 QDVYKKQLETLMLNLKQQKPQLNKICLATSDGFEFVEVKDILYCKAEGSYTTFILKNSEK 181 Query: 173 GFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRY 229 L+ E+ +R H +L+NL +++ D G +I+ N TV +SR Sbjct: 182 LLVSKHLKEYENLLLEQNFMRVHNSFLINLKEVKKYIKSDGGY--IIMSNDDTVSISRSK 239 Query: 230 LKSLKEAIGL 239 + + + Sbjct: 240 KDDFIKVMSM 249 >UniRef50_A6LDC2 Two-component system response regulator protein n=5 Tax=Bacteroidales RepID=A6LDC2_PARD8 Length = 234 Score = 199 bits (506), Expect = 7e-50, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 127/239 (53%), Gaps = 18/239 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IK +I DDEP+AR+ LR + + + IVGEC +A++ ++ ++ D+LFLDI+MP +S Sbjct: 3 IKCIITDDEPIARKGLRRHIGKIDFLTIVGECEDAIQLNNMLNSVQADLLFLDIEMPDMS 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL+ + ++ P ++ +A++ YA++ +E DYLLKPI +R K++ + Sbjct: 63 GLDFLE--SAQNAPKVIITSAYERYALRGYEFDVVDYLLKPISFSRFLKSVNKAHALMES 120 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 S P +I ++ L +K++ F+ + + + + KE L L++ Sbjct: 121 TSKSEEPA------YIFVKTEKQLKRLYLKEIQFIEGMENYIVIHTLTSKE-IVHLRLKS 173 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 ++ P ++ HR ++VNL+++Q I L++ +PVSR + + ++I Sbjct: 174 IQETLPAQIFMQVHRSFIVNLSYVQAIE------GNLLIIGEHKIPVSRPLREEVYKSI 226 >UniRef50_Q2RI16 Transcriptional regulator, LytR/AlgR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RI16_MOOTA Length = 245 Score = 199 bits (506), Expect = 8e-50, Method: Composition-based stats. Identities = 65/245 (26%), Positives = 124/245 (50%), Gaps = 7/245 (2%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+ +I DD + R L+E ++++I+ E + + + V +LRPD+ FLDI+MP Sbjct: 1 MLTGIIADDNEIERLYFCKLLEETNEVKILAEAQDGLTVLDLVTRLRPDIAFLDIEMPGP 60 Query: 61 SGLEMVG-MLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +GLE+ +L IVF TA+ ++A++AF ++ DYLLKP D R+ KT+A+++++ Sbjct: 61 NGLEVAREILTLAPETLIVFFTAYRDFAVEAFALNSVDYLLKPFDAFRVRKTVAKVQEKL 120 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 + ++V P + L + RI+L+ + ++ F+ + + K+ T T+ Sbjct: 121 AAREVIKKPGGGR-LDKLAIRNKGRIFLINLDEIIFIEKSGKNTTIIHTDRKDFHTPQTI 179 Query: 180 RTLESRTP----LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVP-VSRRYLKSLK 234 LE + R H+ YL+NL ++ I + +SR + +K Sbjct: 180 AELEQQLARHSFFQRVHKSYLINLNMVESISPFGGNSFIVKFSGCKKDAIISRGNIDLVK 239 Query: 235 EAIGL 239 + + + Sbjct: 240 KHLKI 244 >UniRef50_C0A760 Response regulator receiver protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A760_9BACT Length = 247 Score = 199 bits (506), Expect = 9e-50, Method: Composition-based stats. Identities = 68/245 (27%), Positives = 122/245 (49%), Gaps = 12/245 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 I+ +I DDEP +L ++ +EI + + AV +LRPD+ FLD++MP + Sbjct: 3 IRAIIADDEPYLAAHLASMIRAAWPAVEIADVVHDGHAAVEAVARLRPDLAFLDVRMPGL 62 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE-- 118 +G+E+ ++VF+TA+DEYA+ AFE A DYLLKP+ E RL +T+ RL+ Sbjct: 63 NGIEVGWR---ATGTHVVFVTAYDEYAVAAFELGAIDYLLKPLTEERLTRTINRLKPYFC 119 Query: 119 RSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELT 178 S + L + +G + + ++ DV F + + + V + + G + Sbjct: 120 FSCPRQRHQAVDFPRLLRVVSSGGNEHFFIRPMDVLFFQTAGNYLLVEGRD-RRGMMRSS 178 Query: 179 LRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSL-- 233 L L S+ ++ HR LVN+ + +R + +G + + + VSR++ + Sbjct: 179 LSELRSQLDPCQFVQIHRGTLVNIDAVDCVRRQGHGAVVTLFEKNVELRVSRQFAHRMLS 238 Query: 234 KEAIG 238 + +G Sbjct: 239 RAVLG 243 >UniRef50_A1ZI08 Two-component system response regulator n=3 Tax=Bacteroidetes RepID=A1ZI08_9SPHI Length = 258 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 55/253 (21%), Positives = 120/253 (47%), Gaps = 28/253 (11%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + +IVDDEPLARE +++ +QE ++++G NA++ + K D++FLDIQMP ++ Sbjct: 1 MNCIIVDDEPLAREGMKLNIQELPSLQLIGSFENAMQANDFLSKNEVDLMFLDIQMPEVT 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL------ 115 GL+ + L+ + P+++ TA+ ++A++ + DYL+KPI R K + ++ Sbjct: 61 GLDFLKTLNLKKPPFVILTTAYPQFALEGYALDVIDYLVKPISMDRFIKAVNKVDYYYKL 120 Query: 116 ------------RQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGV 163 D + +N +I + + +++ +V V Sbjct: 121 REQASTDTTPAAANTDKTSDSPVGSDNADIEDYIFIRADRKYMKVFFREINYVEGLKDYV 180 Query: 164 YVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG 220 V + + ++ T + ++T+E + P +R + Y++N+ H++ + + Sbjct: 181 IVYT-DTQKIVTAMNIKTIEGQLPSNLFIRVSKSYIINMQHIKAVDNNF------VTIKE 233 Query: 221 LTVPVSRRYLKSL 233 VP+ + + + Sbjct: 234 KEVPIGKAFKDNF 246 >UniRef50_D2QDG4 Two component transcriptional regulator, LytTR family n=4 Tax=Bacteroidetes RepID=D2QDG4_9SPHI Length = 254 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 67/254 (26%), Positives = 117/254 (46%), Gaps = 24/254 (9%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRP-DVLFLDIQMPRI 60 + + VDDEPLA + F+++ +++ G S+AVE + + P +V+FLDIQMP + Sbjct: 3 LSCIAVDDEPLALGLVCAFIEKTPFLQLAGRYSSAVEALEGLLSGPPVNVVFLDIQMPDL 62 Query: 61 SGLEMVGMLDPEHR----PYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR 116 +GLE+ +L+ +R IVF TAFD++A+ F A DYLLKP + + ++ R Sbjct: 63 TGLELARVLERSNRGAHTTRIVFTTAFDQFALDGFRVDALDYLLKPFNYEEFLRAASKAR 122 Query: 117 Q--------ERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT-- 166 Q E L N+ A + ++ + D+ ++ V V Sbjct: 123 QYFDLVQRTEPVPAAQVLAAPNEIADDHLFLKVEYQLVRIAYNDILYIEGLKDYVKVYRQ 182 Query: 167 SHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTV 223 S K + +L+ LE + P +R HR ++++L + + + + Sbjct: 183 SEPDKPLLSLTSLKGLEEKLPANQFMRVHRSFIISLQRISAFTRNS------VQIGSVVI 236 Query: 224 PVSRRYLKSLKEAI 237 PVS +Y + I Sbjct: 237 PVSDQYKDVFGQFI 250 >UniRef50_C6XX74 LytTr DNA-binding region n=5 Tax=Bacteroidetes RepID=C6XX74_PEDHD Length = 231 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 63/241 (26%), Positives = 125/241 (51%), Gaps = 14/241 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + LIVDD +A L+ + + + +VGEC +AVE + D+LFLDI+MP +S Sbjct: 1 MNCLIVDDNIIALAVLKKLISMEPTLTVVGECFDAVEAYKQIQTKEVDILFLDIEMPDMS 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+E+V L + RP ++F T+ YA +AF+ + D+L+KP+ AR + + + ++ Sbjct: 61 GIELVKSLG-DKRPMVIFTTSTIGYAAEAFDLNVVDFLIKPVSPARFLQAVEKAKRVLLT 119 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 + +S+ + +F+ + + +++ D+ ++ +R V + + +L++ Sbjct: 120 KGLSVADKED---EFVFIRDSNVVRRVKVSDILYMEARGDYVRINLTD-HTYSIHSSLKS 175 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIG 238 +E + LR HR +++N+ + I G ++ RN VPVS Y +L + + Sbjct: 176 VEEKLSKNMFLRVHRSFIINVGKIDTIE----GGTLIVHRN--MVPVSDAYRATLYKRMQ 229 Query: 239 L 239 + Sbjct: 230 I 230 >UniRef50_A5FIV7 Two component transcriptional regulator, LytTR family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FIV7_FLAJ1 Length = 237 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 59/232 (25%), Positives = 114/232 (49%), Gaps = 13/232 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + LIVDDE A + L + + +++E G + +E + ++ + D++FLDI MP IS Sbjct: 5 YRCLIVDDESPAHKALISHISKFNELEHSGSAFSGMEALKLLNANQYDIIFLDINMPVIS 64 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+E++ + +RP + TA+ ++A+ A++ A DYLLKPI + K + + + S Sbjct: 65 GVELMEL--QPNRPLTIVTTAYSDFALSAYQNDAIDYLLKPISPEKFAKAIEKAKTYFSG 122 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT-SHEGKEGFTELTLR 180 SL E+ K + + + + D+ ++ S + + + + +L Sbjct: 123 N--SLKKESNTNSKTFSYRLNGQTIDMPLCDIIYIESLGNYMKLYSTKHNLPHIIYGSLS 180 Query: 181 TLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRY 229 ++ S T ++ HR Y+VN + + + L + NG +PV R+Y Sbjct: 181 SIASEIDSTSFVQVHRSYIVNANKISAVTFK-----NLTMSNGEIIPVGRKY 227 >UniRef50_B7IG84 Autolysin response regulator n=1 Tax=Thermosipho africanus TCF52B RepID=B7IG84_THEAB Length = 227 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 72/242 (29%), Positives = 127/242 (52%), Gaps = 18/242 (7%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MIKV I+DDE ARE+L+ + E +D EIVG + E + + DV+FLDI+MP I Sbjct: 1 MIKVAIIDDEYYARESLKDLINEMTDFEIVGCFESVEEFLKNKKNKKTDVIFLDIEMPSI 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G++ LD IVF+TA+ EYA++AFE +A DYL KP+ E R +T+ R+ ++ Sbjct: 61 NGIKASKCLDKY---EIVFVTAYSEYAVEAFEVNALDYLTKPVSEIRFLETIKRIEEKLR 117 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTE-LTL 179 +++ + I ++ I L D+ + + + + + +L Sbjct: 118 TKNI---------INTIAAENNNEIIFLSFDDILYFEYFEKNIIAITEDNEFVIKHYKSL 168 Query: 180 RTLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 +LE P +R H+ Y++NL +++ E L ++N +P+ + +LK +K+ + Sbjct: 169 GSLEKDLPQNFVRIHKSYIINLNFIEKFIKEP---ISLEMKNKKLLPIGKTHLKEVKKIL 225 Query: 238 GL 239 + Sbjct: 226 KI 227 >UniRef50_A1ZS31 Two-component system response regulator n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZS31_9SPHI Length = 243 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 53/242 (21%), Positives = 118/242 (48%), Gaps = 16/242 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K + +DDE +A E +R Q+ IE++ NA+E I + + D++FLDI MP I+ Sbjct: 4 LKCIAIDDEFMALEVIRHHSQKIPFIELLACFENAIEAIAFLQQHEVDLVFLDINMPDIT 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL+++ + +P +VF TA+ EYA++ ++ + DYLLKPI+ +L K + + + Sbjct: 64 GLQLLKSIT--CQPVVVFTTAYAEYALQGYDFYTVDYLLKPIEFDQLLKAVNKAQHFLQT 121 Query: 122 QDVSLLPENQQALKFIP----CTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL 177 Q + + I ++I+ ++ ++ ++ S + V + ++ + Sbjct: 122 QKTAPTAQVSTPSTHISDTILVKSGTQIHQIKTAEILYIESTGNYVKFVTPH-QQVMSLF 180 Query: 178 TLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLK 234 +++ + P ++ H+ ++V H+ + N +P+ + Y ++ + Sbjct: 181 SMKEVIELLPAQDFVKIHKSFIVAFRHISLFEKHQ------VKINDQPIPIGKTYREAFQ 234 Query: 235 EA 236 + Sbjct: 235 QI 236 >UniRef50_A1ZK58 Two-component system response regulator protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZK58_9SPHI Length = 245 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 72/248 (29%), Positives = 120/248 (48%), Gaps = 21/248 (8%) Query: 1 MI-KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 M+ K +I+DDEPLARE L ++Q+ +++ +A+E +H D++FLDI+MPR Sbjct: 1 MLYKCIIIDDEPLARELLEGYVQQVPFLQLEQVFPSAIEASLTIHSQTIDLIFLDIEMPR 60 Query: 60 ISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +SGL+ + L P I+F TA+ EYA+ AF + DYLLKPI+ R + + ++ + Sbjct: 61 LSGLDFLRNLK--QPPAIIFTTAYAEYALNAFNLNVVDYLLKPIEFNRFFQAVNKVIKSV 118 Query: 120 SK------QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 + + L ++ + +I + +D+ F+ YV H E Sbjct: 119 PQTITPPEPHQATLETTKEDEAYFFIKTDQKIVKVLTQDILFIEGLQK--YVKIHLPNEI 176 Query: 174 FTELT-LRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRY 229 LT L L + P R HR Y++N+AH+ I Q I +P+S+ Sbjct: 177 LISLTSLSHLLEKLPSDSFTRIHRSYIINIAHIDSI------QGNTITIQKHHLPLSQGN 230 Query: 230 LKSLKEAI 237 + + I Sbjct: 231 RSAFYDLI 238 >UniRef50_A7HMG0 Two component transcriptional regulator, LytTR family n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HMG0_FERNB Length = 254 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 75/256 (29%), Positives = 130/256 (50%), Gaps = 24/256 (9%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K +IV+DE L L L+E+ IE++G N EGI V +L+PDVLFLDI + Sbjct: 1 MKCVIVEDEKLLAMVLEKMLKEE-GIEVLGWADNVDEGIRLVDELKPDVLFLDINLGDKD 59 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G ++ ++ H+PY+VF+TA+ EYA+KAFE +A DY+LKP+ RL+ + ++ + Sbjct: 60 GFYLLSKIN--HKPYVVFVTAYSEYAVKAFERNAIDYILKPVSRERLKNAIDKVSKAIES 117 Query: 122 QDVSLLPEN-----------------QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVY 164 + ++ ++ K IP + I L+ D+ + Sbjct: 118 KKLNENYQDFIEEKIRSMLERLSYDLSNLQKKIPIETENEIVLVNCDDIILFQASEGLTV 177 Query: 165 VTSHEGKEGFTELTLRTLE---SRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL 221 V +G T+ L+ E S+ +R H+ Y++++ +++I G + L NG Sbjct: 178 VNLKQGILK-TKTPLKEFEAKLSKDKFIRVHKSYIISINAVKKILKNYIGGLAIELINGN 236 Query: 222 TVPVSRRYLKSLKEAI 237 +PV R Y +++K+ I Sbjct: 237 IIPVGRMYKENIKKII 252 >UniRef50_A5FIA9 Two component transcriptional regulator, LytTR family n=3 Tax=Flavobacteriales RepID=A5FIA9_FLAJ1 Length = 237 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 112/239 (46%), Gaps = 12/239 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IK LI+DDEPLA ++ +L+ + E+V SN +EG+ + + DV+FLDI MP + Sbjct: 3 IKCLIIDDEPLAINVIKNYLEPLENFEVVNTFSNPIEGLNFLKNNKVDVIFLDINMPVLD 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+ + L E+ P +V +A+ ++AI+ +E DYL+KPI+ RL KTL ++ + Sbjct: 63 GINFIKSL--ENPPLLVITSAYSQFAIETYELDVLDYLVKPIEFPRLMKTLNKISKRLEN 120 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 + S N + R+ + ++ + S + + + GK TL Sbjct: 121 KASSPQESNPDSPFIFVKIDKKRMKKIFFNEILVIESLKDYLKINTTTGK-YIIHSTLSD 179 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 P LR HR Y + + + + I GL + R Y+ +K+ I Sbjct: 180 FTDLLPEKNFLRIHRSYTIAIDKIDAVE------GNSIEIEGLRYVIGRSYIDHVKQRI 232 >UniRef50_Q8DVB7 Sensory transduction protein lytR n=3 Tax=Streptococcus RepID=LYTR_STRMU Length = 244 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 72/245 (29%), Positives = 128/245 (52%), Gaps = 8/245 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEI--VGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 + +LI+DDE LAR+ L +Q+ +++ + E + + + + D++FLDI + Sbjct: 1 MNILILDDEMLARQELTFLIQQSKELDHPDIFEAEDISSAEKILFRQQIDLIFLDISLSE 60 Query: 60 ISGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE 118 +G + L+ H P +VF TA+D YA+KAFE +A DY+LKP ++ R++K LA++++ Sbjct: 61 ENGFTLANQLEQLAHPPLVVFATAYDHYAVKAFESNAADYILKPFEQGRVDKALAKVKKI 120 Query: 119 RSKQDVSLLPENQQA-LKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL 177 + + ++ ++ + T R +L+M D+ +S G S + + Sbjct: 121 QHLSTIDETATTEKKGMELLTLTLADRSIVLKMPDIV-AASIEDGELTVSTKNTSYTIKK 179 Query: 178 TLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLK 234 TL ++R L+ HR +VNL +QEI+ N L++ NG PV R Y+K L Sbjct: 180 TLNWFKTRAKTNYFLQIHRNTVVNLEMIQEIQPWFNHTLLLVMVNGEKFPVGRSYMKELN 239 Query: 235 EAIGL 239 + L Sbjct: 240 AHLTL 244 >UniRef50_A7AJK4 Putative uncharacterized protein n=2 Tax=Parabacteroides RepID=A7AJK4_9PORP Length = 251 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 71/247 (28%), Positives = 119/247 (48%), Gaps = 14/247 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQ-SDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 I IVDDE RENL + I I CS+ E + + +PD+LFLDI++ Sbjct: 5 ITAAIVDDEQGNRENLLRMIGNYCPQIRISAICSSVTEARTVLPEAKPDILFLDIRLGDD 64 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLAR-----L 115 +G ++G L PE ++F+TA+D YAI+A A DYLLKPID L + + L Sbjct: 65 TGFSLLGSL-PEIPFEVIFVTAYDSYAIQAIRFSALDYLLKPIDPEELTHAVDKAVQVVL 123 Query: 116 RQERSKQDVSLLPENQ--QALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 R++ +K+ +LL Q K I + +I +++ + S + G++ Sbjct: 124 RKQENKRMQNLLQNTQALDKQKKIALSVADKIEFVEIGSIIRCESESNYTTFYLKSGEKL 183 Query: 174 FTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYL 230 TL+ + LR H+ +L+NL ++ D G + +++G +V +SR+ Sbjct: 184 IVSKTLKEFDELLAPYHFLRVHQSHLINLDEIKSFIKSDGGY--IRMKDGASVSISRQRR 241 Query: 231 KSLKEAI 237 + E + Sbjct: 242 NYVMEVL 248 >UniRef50_D2QHW7 Two component transcriptional regulator, LytTR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QHW7_9SPHI Length = 237 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 119/245 (48%), Gaps = 19/245 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ L+VDD+PLA + L ++ + + + +N ++ + V + D++ LDIQMP ++ Sbjct: 5 IRCLVVDDKPLALDILTNYIGKVPFLHLAAATTNPLDALTRVAQEPIDLILLDIQMPELT 64 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL+ + L+ R ++ TA+ EYA+ FE DYLLKPI R + + +++Q+ Sbjct: 65 GLQFLTALNSRSR--VILTTAYAEYALDGFEHDVVDYLLKPISFERFYRAVLKVQQQMRP 122 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 L + ++ R+ + + ++ + + V + ++ T + Sbjct: 123 SPDLPLEQRA----YLFIRTEHRMQRVDIANILYAEGLQNYTVVHT-VAEKVIARQTFGS 177 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT----VPVSRRYLKSLK 234 LES P +R H+ ++V LAH+ + ++ + ++NG +P+ Y + Sbjct: 178 LESNLPPSAFVRVHKSFIVALAHISTVE-----RSRIYIKNGNQEPVNIPIGDAYRERFY 232 Query: 235 EAIGL 239 + +G+ Sbjct: 233 KLLGM 237 >UniRef50_B3JKI8 Putative uncharacterized protein n=3 Tax=Bacteroides RepID=B3JKI8_9BACE Length = 235 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 71/238 (29%), Positives = 127/238 (53%), Gaps = 13/238 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IK + +DDEP+A E + F Q +IE+ +N + GI V K++P++LFLDI+M I+ Sbjct: 3 IKCIAIDDEPMALEIISSFCQRHGNIELT-VFTNPIAGIEQVKKIKPNILFLDIEMEDIN 61 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G ++ L H ++F TA+ +YA+ FE +A D+L KP AR EK + + + ++ Sbjct: 62 GRDLARDL--PHEVMLIFTTAYAQYALDGFELNAIDFLHKPFSYARFEKAVQKAIELQTL 119 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 Q +S P ++I + +Q+KD+ ++ S + V + ++++L+T Sbjct: 120 QQLSAQPTFTD--EYITLKVEYKNTNIQLKDILYIESMDNYVRIHLTSQPTLTSQMSLKT 177 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEA 236 L+ P +R H+ ++V + + E++L NG+ +PV R Y K LK+ Sbjct: 178 LQELLPEEKFIRVHKSFVVPIYRIASYT-----SKEILLYNGIKIPVGRSYSKYLKDK 230 >UniRef50_C7PT73 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PT73_CHIPD Length = 243 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 59/245 (24%), Positives = 122/245 (49%), Gaps = 16/245 (6%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI L+VDDE A + L + + +++V +NA+E + V+ + D++FLDIQMP + Sbjct: 1 MINCLVVDDEQHAIDVLTHHISQIPFLQLVKSTTNAIEALQIVNMQKIDLVFLDIQMPEM 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SGL+ + + + ++ TA+ E+A + F+ DYLLKPI R K + R+ + Sbjct: 61 SGLDFAKTIQGKSK--VILTTAYSEFAAEGFDLEVVDYLLKPIPMPRFLKAVQRVLNMVT 118 Query: 121 KQDVSLLPENQQALK----FIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTE 176 + E+ +++ F+ ++ + ++D+ ++ + V + H G++ Sbjct: 119 SSVAATPVEDASSIENDYIFLKTEFKGKMLKVNLRDIDYIEGMKNYVAIH-HAGQKTMAL 177 Query: 177 LTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKS 232 L ++ LESR P R H+ ++V+L+ + I + ++L++ + + Y Sbjct: 178 LNMKDLESRLPKKHFYRVHKSFIVSLSKIIAIE-----GSMIVLKDVKAEILLGDTYKAG 232 Query: 233 LKEAI 237 + + Sbjct: 233 FYDIM 237 >UniRef50_A5FB58 Two component transcriptional regulator, LytTR family n=3 Tax=Flavobacteriales RepID=A5FB58_FLAJ1 Length = 233 Score = 197 bits (501), Expect = 3e-49, Method: Composition-based stats. Identities = 60/239 (25%), Positives = 123/239 (51%), Gaps = 13/239 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IK +++DDEPLA + L+ + +D E++G +N++E + ++ D +FLDI MP ++ Sbjct: 3 IKCVLIDDEPLAIKVLQNYFNNFTDFEVIGTFNNSLEALDFINSTSVDAVFLDINMPMMT 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E++ ++ E++ ++ TAF E+A ++++ DYL+KPI R K + ++ E + Sbjct: 63 GFELISLI--ENKTKVIITTAFREFAAESYDLDVLDYLVKPIPLPRFIKCINKITTEYNL 120 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 ++ ++ + + I ++ + ++++ F+ + V + + K T +L + Sbjct: 121 KN-NIKIDTTKGDSHIFIKVDKKMMKINIEEILFIEGMKEYIKVVTPD-KTYITHKSLTS 178 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 L P LR H+ Y++ L ++ I I T+P+ R Y K +K I Sbjct: 179 LSEELPADRFLRIHKSYVIALNKVKSIE------GNRIQIQSYTIPIGRNYSKDVKNRI 231 >UniRef50_A9WL18 Two-component response regulator n=4 Tax=Micrococcaceae RepID=A9WL18_RENSM Length = 266 Score = 196 bits (500), Expect = 4e-49, Method: Composition-based stats. Identities = 62/237 (26%), Positives = 114/237 (48%), Gaps = 14/237 (5%) Query: 4 VLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGL 63 V++ DDE A L L + I + + E + + + D LFLDI MP +SGL Sbjct: 26 VIVADDEQPAVRELAYLLGQDDRIGAIYSSISGTEVLQLLDAHQIDALFLDIHMPGLSGL 85 Query: 64 EMVGMLDPEHR---PYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 ++ +++ R P IVF+TA ++ A++AFE A DYLLKP+ L +++ R+ ++ Sbjct: 86 DLAKVINKFSRAEQPAIVFVTADEDRAVEAFELAAVDYLLKPVRTEPLAESVRRITEQLQ 145 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + Q I L++ ++ +V ++ + + + + L Sbjct: 146 -----FPEQMAQTDDLITVDQGGITKLIRKSEIRYVQAQGDYARLHTADA-SFLIRVPLS 199 Query: 181 TLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLK 234 LE + LR HR YL+++ H+ ++++ + I ++PVSRR+L L+ Sbjct: 200 ELEEQWQSAGFLRIHRSYLISMPHVSQLQMSRGSASVRI--GDASLPVSRRHLPGLR 254 >UniRef50_A4C5W8 Two-component system response regulator protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C5W8_9GAMM Length = 228 Score = 196 bits (498), Expect = 7e-49, Method: Composition-based stats. Identities = 73/242 (30%), Positives = 121/242 (50%), Gaps = 18/242 (7%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+K L++DDEPLA E + L + SDI IVG C NA + + + D+LFLDI MP + Sbjct: 1 MLKALMIDDEPLAHEVIVYHLAQHSDIRIVGRCYNATQALSWLASNEVDLLFLDINMPDL 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G++++ +L +RP ++ ++A+ EYAI+ FE DYLLKP+ RL L ++R Sbjct: 61 NGIDLLKVLR--NRPQVIIISAYQEYAIQGFELDVTDYLLKPVCGERLSLALDKVRLRTQ 118 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE-GFTELTL 179 KQ + N+ + I + D+ + + G YV +G + +L Sbjct: 119 KQLL-----NKPEPQHIILKVDREKRKFSLTDITLLEAY--GNYVKLWQGNDMVLVSSSL 171 Query: 180 RTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEA 236 + L P + H+ Y+VN + + + L L G TV S+ + K+L+ Sbjct: 172 KLLIEALPNRQFTQVHKSYVVNNVKVVALETD-----LLTLECGRTVKASKTFKKNLQRL 226 Query: 237 IG 238 + Sbjct: 227 LS 228 >UniRef50_Q39P82 Transcriptional regulator, LytR/AlgR family n=21 Tax=Burkholderia RepID=Q39P82_BURS3 Length = 243 Score = 196 bits (498), Expect = 8e-49, Method: Composition-based stats. Identities = 69/247 (27%), Positives = 117/247 (47%), Gaps = 15/247 (6%) Query: 1 MIKVLIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 M LI DDEP L L ++EIVG N V+ + ++ RPD FLDI+MP Sbjct: 1 MPTALIADDEPNLSAELAARLATLWPELEIVGMPRNGVDALAELNAKRPDFAFLDIRMPG 60 Query: 60 ISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 I GL++ ++ ++VF+T++DEYA++AF++ A DYLLKP+ + RL + + +L++ Sbjct: 61 IDGLKIASLV---PHVHVVFVTSYDEYAVQAFDQSAIDYLLKPVADDRLLRCIVKLQRGG 117 Query: 120 SKQDVSLL------PENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 + L P + +++I L+ + +V + + V + + Sbjct: 118 PAPTDTELLANAAEPRDAAPIRWITVGLRDTTRLVSVDEVLYFQAADKYTEVVTA-SERH 176 Query: 174 FTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRY 229 LR + R + HR +V A + I + G+ + LR G +PVSR Sbjct: 177 VIRTPLREMLQRLDTERFAQVHRGVIVAYAAIDHIERDLLGRQRIHLRGSGDVLPVSRAC 236 Query: 230 LKSLKEA 236 K+ Sbjct: 237 AGLFKQM 243 >UniRef50_C6WYV3 Two component transcriptional regulator, LytTR family n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYV3_METML Length = 255 Score = 196 bits (498), Expect = 8e-49, Method: Composition-based stats. Identities = 71/250 (28%), Positives = 117/250 (46%), Gaps = 16/250 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHK-----LRPDVLFLDIQ 56 + ++I DDE AR LR L + +I+ E N E + V++ +++ LDI+ Sbjct: 7 LNIVIADDEAPARSRLRTLLGDIPHTQIMAEARNGKELLEVVNQASDTHTAANIVLLDIR 66 Query: 57 MPRISGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL 115 MP + G+E L P I+F TA+D YAI+AF+ A DYLLKPI RL+ L + Sbjct: 67 MPEMDGIEAAQHLQKLPQPPAIIFTTAYDNYAIQAFDISAVDYLLKPIRLERLQTALQKA 126 Query: 116 RQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFT 175 R + Q +L P + Q + RI L+ + ++ ++ + + + V + E +E Sbjct: 127 RALQPSQLETLTPLSPQR-THLSINERGRILLVPINEIIYLRAELKYITVRTAE-REYLI 184 Query: 176 ELTLRTLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQA------ELILRNGLTVPVSR 227 E +L LE R HR L A++ + + L+ T+ VSR Sbjct: 185 EESLSHLEQEFSHIFTRLHRNCLAANAYILGYEKRHHDEHAEKQWVALLKHVPETISVSR 244 Query: 228 RYLKSLKEAI 237 R +++ I Sbjct: 245 RQQHLIRQTI 254 >UniRef50_C6WDP6 Two component transcriptional regulator, LytTR family n=2 Tax=Actinomycetales RepID=C6WDP6_ACTMD Length = 275 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 70/261 (26%), Positives = 115/261 (44%), Gaps = 28/261 (10%) Query: 4 VLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVH--------------KLRPD 49 VL VDDE + ++ L+ I V +A E + + + D Sbjct: 7 VLAVDDEAPGLDEIKFLLESSPHIRRVLTAFDAAEALRILRGDYDTEVMERQEAGQPPVD 66 Query: 50 VLFLDIQMPRISGLEMVGMLDP-EHRPYIVFLTA--FDEYAIKAFEEHAFDYLLKPIDEA 106 +F DI MP +SG ++ +L P +VF+T E A+ AF+ A D++ KPI+ Sbjct: 67 AVFADINMPGLSGTDLARVLGAFRAPPALVFVTGVEHSE-AVVAFDVGAVDFVTKPINSD 125 Query: 107 RLEKTLARLRQERSK-----QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMS 161 R+ K +AR+ + + Q + IP I L+ V +V ++ Sbjct: 126 RVNKAIARVVDRVNSVSAAAAAPEPTAADSQDDEVIPVELGGTIKLVPRASVRYVEAQGD 185 Query: 162 GVYVTSHEGKEGFTELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILR 218 + +++G+ + L LE R +R HR +LV L + E+R+ NG A +I Sbjct: 186 YARLHTNDGQSHLVRIPLAQLEERWENAGFVRIHRSFLVALPLVTELRMTSNGYAVVIGS 245 Query: 219 NG--LTVPVSRRYLKSLKEAI 237 +PVSRR+ + LKE I Sbjct: 246 GEGAKELPVSRRHTRDLKERI 266 >UniRef50_C6BHH2 Two component transcriptional regulator, LytTR family n=5 Tax=Burkholderiaceae RepID=C6BHH2_RALP1 Length = 277 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 74/273 (27%), Positives = 122/273 (44%), Gaps = 40/273 (14%) Query: 3 KVLIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHK----LRPDVLFLDIQM 57 +VLI DDEP ENL L + ++ + + + PDV+FLDI+M Sbjct: 6 RVLIADDEPALAENLVAELAALWPEATLLPAVHDGQSALDVIDDAADGQGPDVVFLDIRM 65 Query: 58 PRISGLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR 116 P +SG+++ L + RP +VF+TA+D++A+ AFE+ A DY+LKP+ RL +T+ RL+ Sbjct: 66 PGLSGIDVARELSQRDVRPLVVFVTAYDQFALDAFEQAAVDYVLKPVQTERLAETVKRLK 125 Query: 117 QE---RSKQDVSLLPENQQA--------------------------LKFIPCTGHSRIYL 147 R + L N L+FI + Sbjct: 126 DRLGTRPNGNADALATNPAQTLAELVERLAGLQGAAQTRATPQGGYLRFIKALVGQEVRF 185 Query: 148 LQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQE 204 + + DV ++ + V V S G E +LR L ++ + HR +VN+AH+ Sbjct: 186 IPVDDVIYLEATDKYVNVVSASG-ESLIRTSLRDLLTQLDPEHFWQVHRGTVVNVAHVSS 244 Query: 205 IRLEDNGQAELILRNGLT-VPVSRRYLKSLKEA 236 G+ L +R +PV+R+Y ++ Sbjct: 245 AVHLSLGRLGLKIRGRTETLPVARQYAHLFRQM 277 >UniRef50_C7PNX8 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PNX8_CHIPD Length = 231 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 55/239 (23%), Positives = 105/239 (43%), Gaps = 16/239 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ + +DDE A + + F E I++ + + + + K D+LFLDI MP ++ Sbjct: 3 IQAIAIDDELPALKLIENFCSEVEGIQLQKTFNVPADALKHIGKYPVDLLFLDINMPSVT 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G + L E ++F TA EYA++ F +A DYLLKP R ++ + + +Q Sbjct: 63 GTDFYRSLQQEA--MVIFTTAHAEYAVEGFNLNAVDYLLKPFTFERFQQAVQKAQQLIQS 120 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 + A + + +Q+ ++ F+ + + H+ +T++ Sbjct: 121 RHT-----QPAATPPLVFRVDYGLTRVQLNEILFIEGLDDYLKIHLHQQAPLIVRMTMKA 175 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 L + P +R HR ++V L ++++R + I G +PVS Y + Sbjct: 176 LLEKLPPQSFIRVHRSFIVALDRVEQVRNKT------IHIAGHEIPVSSSYETAFFSQF 228 >UniRef50_A6EH20 Response regulator n=1 Tax=Pedobacter sp. BAL39 RepID=A6EH20_9SPHI Length = 247 Score = 194 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 62/250 (24%), Positives = 122/250 (48%), Gaps = 17/250 (6%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI +I++DEP R ++ + ++ DI I+G +N + + + +P ++ +DIQ+ Sbjct: 1 MIDTIIIEDEPAVRREIKYLVSQEDDINILGTATNVKDAVALIKATKPQLVLMDIQLVDG 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE-- 118 + +++ E I+F+TA++ +AIKA + A DYLLKP+DE L+ L R R E Sbjct: 61 TAFDVLSEFS-EITFRIIFITAYNHFAIKAIKYGALDYLLKPLDEQELQAALQRARTETL 119 Query: 119 ---RSKQDVSLLPENQQALK----FIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGK 171 + +Q +++ + ++ I + +++++D+ + S S EG+ Sbjct: 120 DGSQQQQQLTIANDTKEIQDSLESHIVLHTMEYLQVVKLRDIIYCQSEGSYTNFFLTEGR 179 Query: 172 EGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRR 228 + L+ + P LR H+ YLVN+ + + +IL++ +PVS R Sbjct: 180 KILISKPLKFYDEILPDQWFLRAHQSYLVNITCVDKFLK----TGFIILKDKTEIPVSSR 235 Query: 229 YLKSLKEAIG 238 + + I Sbjct: 236 KKDYILQRIN 245 >UniRef50_C7PR40 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PR40_CHIPD Length = 248 Score = 194 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 55/237 (23%), Positives = 117/237 (49%), Gaps = 14/237 (5%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI ++VDDE A E L + +++ S +++ G +N VE + +H+ D++FLDIQMP + Sbjct: 1 MINCIVVDDEAHAIELLTLHIEQTSFLKLAGTATNPVEALQLLHQTEMDLIFLDIQMPGM 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SG+E++ +L+ +++ ++ TAF EYA+ ++ + DYLLKPI R K + R + Sbjct: 61 SGIELLQLLNEKYK--VILTTAFREYALDGYDHNVVDYLLKPIFFPRFLKAVQR-----A 113 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 ++ ++ + + ++ + + D+ ++ + V + + ++ +L + Sbjct: 114 QEAIASPKKETDDFILVKTEYKGKLLKINVNDIIYIEGKGRYVCFHTRDKEQVMAQLNIG 173 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLK 234 +LE + P LR H+ + + +G + +P+ + Y Sbjct: 174 SLEGKLPGDRFLRIHKSF----IIAIPFIIMIHGNMVHLEFTEDQIPIGQTYRDVFM 226 >UniRef50_A6FYA0 LytTr DNA-binding domain family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FYA0_9DELT Length = 238 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 71/238 (29%), Positives = 107/238 (44%), Gaps = 15/238 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + LIVDDEP AR LR L + + +VGE +A + + RPDV+ LDI+M Sbjct: 5 LTALIVDDEPPARRRLRALLGQL-GVAVVGEAGSARAAEALLARHRPDVVLLDIEMRGEH 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+++ R +VF+TA ++A+ AF A DY+LKP+ RL + L R Sbjct: 64 GIDIARSWAG--RVGVVFVTAHAQHAVAAFGVDAIDYVLKPVSAPRLLEALERAAAR--- 118 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTE-LTLR 180 LP QA + I L V + S V + TL Sbjct: 119 -----LPRRGQAPPRLVVRSTEGIAWLDTDSVLRIESAGDYVEFHLAGPQPSLLSPTTLG 173 Query: 181 TLESRT--PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEA 236 E+ P +R HR+++V +Q + G+ L L G ++PV RRY +++K Sbjct: 174 HWEATLPEPFVRVHRRHIVRWTAIQALVTGREGR-RLELAGGGSIPVGRRYFEAVKAR 230 >UniRef50_C6VRP4 Two component transcriptional regulator, LytTR family n=3 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VRP4_DYAFD Length = 254 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 111/245 (45%), Gaps = 16/245 (6%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQ-SDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 MIKVLIVDDEP +R L +++ ++ V + + + + RP+++FLD++MP Sbjct: 1 MIKVLIVDDEPRSRNVLAHYIETYVEEVREVKQAESVDNALQILKTFRPNIVFLDVEMPG 60 Query: 60 ISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +G + + L E ++F TA+++YA++A A DYLLKP+D L + R ++ Sbjct: 61 KNGFDFLRALK-EPAFEVIFTTAYNQYAVQAIRFSALDYLLKPVDPDELRSAVNRFLKKA 119 Query: 120 SKQDVSLLPEN--------QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGK 171 + +L +N + + + + + + + + + K Sbjct: 120 NVHQNPVLFDNLVRNIAHKRASEFRLAVPYQDGVSFFTLDQIVRLQGEGNYTNIYIKSRK 179 Query: 172 EGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRR 228 TL+ E +R H+ +LVN + ++ + + L +G V +SRR Sbjct: 180 PVLASKTLKHYEEMLTEFGFIRTHKSHLVNPKFIAKLMAD---HDLVELLDGSRVEISRR 236 Query: 229 YLKSL 233 + + Sbjct: 237 KKEEV 241 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AFT7 Uncharacterized response regulatory protein yehT... 292 6e-78 UniRef50_Q2RYN6 Two-component system response regulator protein ... 286 6e-76 UniRef50_C6CMQ8 Two component transcriptional regulator, LytTR f... 284 2e-75 UniRef50_B5JNB1 LytTr DNA-binding domain family n=1 Tax=Verrucom... 276 6e-73 UniRef50_C9RCQ8 Two component transcriptional regulator, LytTR f... 274 2e-72 UniRef50_B0TBI1 Sensory transduction protein lytt n=1 Tax=Heliob... 272 7e-72 UniRef50_A4A8V2 Sensory transduction protein lytR n=2 Tax=unclas... 271 2e-71 UniRef50_Q2RH27 Transcriptional regulator, LytR/AlgR family n=2 ... 269 5e-71 UniRef50_B8KHY1 Response regulator n=1 Tax=gamma proteobacterium... 267 2e-70 UniRef50_A7HAA1 Two component transcriptional regulator, LytTR f... 267 2e-70 UniRef50_Q21NI5 Response regulator receiver n=2 Tax=Alteromonada... 266 4e-70 UniRef50_C5WEM5 Two-component response regulator n=1 Tax=Strepto... 266 4e-70 UniRef50_B1ZQK1 Two component transcriptional regulator, LytTR f... 265 9e-70 UniRef50_Q82Z76 Sensory transduction protein lytT n=22 Tax=Enter... 264 2e-69 UniRef50_B4CWB7 Two component transcriptional regulator, LytTR f... 264 2e-69 UniRef50_Q67QS1 Two-component response regulator n=1 Tax=Symbiob... 263 3e-69 UniRef50_Q2S4J5 Response regulator n=1 Tax=Salinibacter ruber DS... 263 4e-69 UniRef50_Q1IUM5 Transcriptional regulator, LytR/AlgR family n=1 ... 262 5e-69 UniRef50_B1ZMA5 Two component transcriptional regulator, LytTR f... 262 6e-69 UniRef50_C7PM85 Two component transcriptional regulator, LytTR f... 262 8e-69 UniRef50_Q2S053 LytTr DNA-binding domain family n=2 Tax=Rhodothe... 261 1e-68 UniRef50_B6R920 Response regulator receiver protein n=2 Tax=Prot... 261 1e-68 UniRef50_B1ZSR0 Two component transcriptional regulator, LytTR f... 259 4e-68 UniRef50_B9M2N5 Two component transcriptional regulator, LytTR f... 259 5e-68 UniRef50_Q3AA03 DNA-binding response regulator n=1 Tax=Carboxydo... 259 6e-68 UniRef50_A1ZD68 LytTr DNA-binding response regulator n=1 Tax=Mic... 259 7e-68 UniRef50_B1ZUF0 Two component transcriptional regulator, LytTR f... 259 8e-68 UniRef50_A1TXX0 Response regulator receiver protein n=3 Tax=Mari... 259 8e-68 UniRef50_Q2S5X7 Alginate biosynthesis regulatory protein n=1 Tax... 258 9e-68 UniRef50_C7R6S4 Two component transcriptional regulator, LytTR f... 258 1e-67 UniRef50_C7MLP3 Response regulator of the LytR/AlgR family n=8 T... 257 2e-67 UniRef50_Q1D286 DNA-binding response regulator n=1 Tax=Myxococcu... 257 2e-67 UniRef50_D0XXI4 Two component transcriptional regulator, LytTR f... 256 3e-67 UniRef50_A1HLU8 Response regulator receiver protein n=1 Tax=Ther... 256 5e-67 UniRef50_B1ZZB5 Two component transcriptional regulator, LytTR f... 255 1e-66 UniRef50_B1I1G2 Response regulator receiver protein n=1 Tax=Cand... 255 1e-66 UniRef50_Q1IKW2 Transcriptional regulator, LytR/AlgR family n=2 ... 255 1e-66 UniRef50_Q03GB5 Response regulator of the LytR/AlgR family n=7 T... 254 1e-66 UniRef50_C6XTW9 LytTr DNA-binding region n=3 Tax=Sphingobacteria... 254 2e-66 UniRef50_C1F8Y7 Response regulators of cell autolysis n=1 Tax=Ac... 254 2e-66 UniRef50_Q0HP79 Response regulator receiver protein n=20 Tax=Bac... 254 2e-66 UniRef50_Q814J1 Sensory transduction protein lytT n=81 Tax=Bacte... 253 3e-66 UniRef50_B8FVL1 Two component transcriptional regulator, LytTR f... 252 5e-66 UniRef50_C6W416 Two component transcriptional regulator, LytTR f... 252 5e-66 UniRef50_Q1ISZ6 Transcriptional regulator, LytR/AlgR family n=2 ... 252 6e-66 UniRef50_Q1ILF8 Transcriptional regulator, LytR/AlgR family n=1 ... 252 6e-66 UniRef50_C8P5Q7 Response regulator n=2 Tax=Lactobacillaceae RepI... 252 7e-66 UniRef50_Q0A576 Response regulator receiver protein n=1 Tax=Alka... 252 8e-66 UniRef50_Q097A8 Response regulator of the LytR/AlgR family n=1 T... 251 1e-65 UniRef50_Q8EDD7 Uncharacterized response regulatory protein SO_2... 251 1e-65 UniRef50_C0ZI44 Two-component response regulator n=1 Tax=Breviba... 250 3e-65 UniRef50_B5JL04 LytTr DNA-binding domain family n=1 Tax=Verrucom... 250 3e-65 UniRef50_D2PNH6 Two component transcriptional regulator, LytTR f... 250 4e-65 UniRef50_A4J8Q7 Response regulator receiver protein n=1 Tax=Desu... 249 5e-65 UniRef50_Q8DET1 Uncharacterized response regulatory protein VV1_... 249 7e-65 UniRef50_A8VV77 Response regulator receiver protein n=1 Tax=Baci... 249 7e-65 UniRef50_Q317D4 Transcriptional regulator, LytR/AlgR family n=9 ... 247 2e-64 UniRef50_Q1YRG1 Response regulator n=1 Tax=gamma proteobacterium... 247 2e-64 UniRef50_A5G4A4 Two component transcriptional regulator, LytTR f... 247 2e-64 UniRef50_B8CWX9 Two component transcriptional regulator, LytTR f... 247 3e-64 UniRef50_A5VAK9 Two component transcriptional regulator, LytTR f... 247 3e-64 UniRef50_Q1QCQ5 Transcriptional regulator, LytR/AlgR family n=1 ... 247 3e-64 UniRef50_B7R6J5 LytTr DNA-binding domain family protein n=2 Tax=... 246 4e-64 UniRef50_Q482L9 LytTr DNA-binding response regulator n=9 Tax=Alt... 246 4e-64 UniRef50_UPI000178918B two component transcriptional regulator, ... 246 5e-64 UniRef50_A4AS29 Two-component system, regulatory protein n=1 Tax... 246 6e-64 UniRef50_B3E2Y5 Two component transcriptional regulator, LytTR f... 245 8e-64 UniRef50_Q21E91 LytTr DNA-binding region n=2 Tax=Saccharophagus ... 245 9e-64 UniRef50_C5RQ54 Two component transcriptional regulator, LytTR f... 245 9e-64 UniRef50_B1ZXP5 Two component transcriptional regulator, LytTR f... 245 1e-63 UniRef50_C9RRP4 Two component transcriptional regulator, LytTR f... 244 1e-63 UniRef50_C1P760 Two component transcriptional regulator, LytTR f... 244 2e-63 UniRef50_Q023F4 Response regulator receiver protein n=1 Tax=Cand... 244 2e-63 UniRef50_Q2SQ69 Alginate biosynthesis regulatory protein AlgR-li... 244 2e-63 UniRef50_C3JDP1 Response regulator, two-component system n=4 Tax... 244 2e-63 UniRef50_B5YGI8 Sensory transduction protein LytT n=1 Tax=Thermo... 243 4e-63 UniRef50_C2D9N2 Two-component response regulator n=3 Tax=Corioba... 243 4e-63 UniRef50_C5CI41 Two component transcriptional regulator, LytTR f... 243 4e-63 UniRef50_B1HWP9 Sensory transduction protein n=2 Tax=Bacillaceae... 242 5e-63 UniRef50_Q8EQQ3 Sensory transduction protein lytT n=1 Tax=Oceano... 242 6e-63 UniRef50_Q3CYS0 Response regulator n=8 Tax=Streptococcus agalact... 242 6e-63 UniRef50_A5FCC1 Two component transcriptional regulator, LytTR f... 242 1e-62 UniRef50_B1YHS9 Two component transcriptional regulator, LytTR f... 241 1e-62 UniRef50_C1AAX5 LytT family two-component response regulator n=1... 241 1e-62 UniRef50_D2QK93 Two component transcriptional regulator, LytTR f... 241 1e-62 UniRef50_Q1IJW2 Transcriptional regulator, LytR/AlgR family n=1 ... 241 1e-62 UniRef50_A4E9X0 Putative uncharacterized protein n=1 Tax=Collins... 241 1e-62 UniRef50_Q47XT5 Response regulator n=4 Tax=Gammaproteobacteria R... 241 2e-62 UniRef50_Q87K77 Uncharacterized response regulatory protein VPA0... 241 2e-62 UniRef50_Q26BE1 Response regulator, LytR/AlgR family n=3 Tax=Fla... 241 2e-62 UniRef50_B5JSZ7 Response regulator receiver:LytTr DNA-binding re... 241 2e-62 UniRef50_D0MDS1 Two component transcriptional regulator, LytTR f... 241 2e-62 UniRef50_A4BK03 Transcriptional regulator n=1 Tax=Reinekea bland... 241 2e-62 UniRef50_A0LZC2 Two-component system response regulator containi... 241 2e-62 UniRef50_Q47KY1 Response regulator receiver n=1 Tax=Thermobifida... 241 2e-62 UniRef50_A0PY89 Sensory transduction protein lytT n=3 Tax=Clostr... 240 3e-62 UniRef50_C0ZBJ6 Two-component response regulator n=1 Tax=Breviba... 240 3e-62 UniRef50_C7PAR0 Two component transcriptional regulator, LytTR f... 239 4e-62 UniRef50_C6VRX1 Two component transcriptional regulator, LytTR f... 239 4e-62 UniRef50_Q01R04 Response regulator receiver protein n=1 Tax=Cand... 239 5e-62 UniRef50_D0ZEJ7 Two-component system response-regulator n=3 Tax=... 239 5e-62 UniRef50_C6W647 Two component transcriptional regulator, LytTR f... 239 5e-62 UniRef50_Q5WAM2 Two-component response regulator n=2 Tax=Bacillu... 239 8e-62 UniRef50_A9DKT5 Two-component system regulatory protein n=1 Tax=... 237 2e-61 UniRef50_A1ZP21 Response regulator of the LytR/AlgR family n=1 T... 237 2e-61 UniRef50_Q025M1 Response regulator receiver protein n=1 Tax=Cand... 237 2e-61 UniRef50_C7PE44 Two component transcriptional regulator, LytTR f... 237 2e-61 UniRef50_Q484G6 LytTr DNA-binding response regulator n=1 Tax=Col... 237 2e-61 UniRef50_P26275 Positive alginate biosynthesis regulatory protei... 237 2e-61 UniRef50_Q9KL96 Uncharacterized response regulatory protein VC_A... 237 2e-61 UniRef50_D0HCT2 Response regulator n=5 Tax=Vibrio RepID=D0HCT2_V... 237 3e-61 UniRef50_C6PV14 Two component transcriptional regulator, LytTR f... 237 3e-61 UniRef50_C6I7A6 Two-component system response regulator n=13 Tax... 237 3e-61 UniRef50_B8KBX1 Transcriptional regulator n=4 Tax=Vibrio RepID=B... 236 4e-61 UniRef50_Q0K6B3 Response regulator containing a LytTR DNA-bindin... 236 4e-61 UniRef50_Q02A01 Response regulator receiver protein n=1 Tax=Cand... 236 4e-61 UniRef50_UPI0001C42EF9 two-component response regulator n=1 Tax=... 236 6e-61 UniRef50_B2I5K9 Two component transcriptional regulator, LytTR f... 236 6e-61 UniRef50_C1ABW9 Two-component response regulator n=1 Tax=Gemmati... 236 6e-61 UniRef50_A4C6V8 Two-component system, regulatory protein n=1 Tax... 236 6e-61 UniRef50_B9DL71 Two-component response regulator n=2 Tax=Staphyl... 236 6e-61 UniRef50_Q01YJ9 Response regulator receiver protein n=1 Tax=Cand... 236 7e-61 UniRef50_Q0QJA1 Putative response regulator n=1 Tax=Pseudoaltero... 236 7e-61 UniRef50_A3WHL3 Two-component response regulator n=1 Tax=Erythro... 235 8e-61 UniRef50_A8MGZ3 Two component transcriptional regulator, LytTR f... 235 8e-61 UniRef50_Q7P589 Two-component response regulator n=15 Tax=Fusoba... 235 9e-61 UniRef50_C6W927 Two component transcriptional regulator, LytTR f... 235 9e-61 UniRef50_A1HSX1 Response regulator receiver protein n=1 Tax=Ther... 235 9e-61 UniRef50_B8JGA2 Two component transcriptional regulator, LytTR f... 235 1e-60 UniRef50_A0M3D4 Two-component response regulator containing LytT... 235 1e-60 UniRef50_A5F9U3 Two component transcriptional regulator, LytTR f... 234 2e-60 UniRef50_Q15WR3 Response regulator receiver protein n=1 Tax=Pseu... 234 2e-60 UniRef50_A3M1E2 Alginate biosynthesis regulatory protein n=20 Ta... 234 2e-60 UniRef50_A5FJA4 Two component transcriptional regulator, LytTR f... 234 2e-60 UniRef50_D0IHA7 Response regulator n=1 Tax=Vibrio sp. RC586 RepI... 234 2e-60 UniRef50_Q4L8V4 Sensory transduction protein lytR n=60 Tax=Bacil... 234 2e-60 UniRef50_A7GIP3 DNA-binding response regulator, LytTr family n=1... 234 3e-60 UniRef50_A6TN10 Two component transcriptional regulator, LytTR f... 234 3e-60 UniRef50_Q2N6M0 Two-component response regulator n=7 Tax=Sphingo... 234 3e-60 UniRef50_A4E9W5 Putative uncharacterized protein n=1 Tax=Collins... 233 3e-60 UniRef50_B0SFX2 Response regulator n=2 Tax=Leptospira biflexa se... 233 3e-60 UniRef50_C9LQT9 DNA-binding response regulator n=1 Tax=Dialister... 233 4e-60 UniRef50_C7PBU1 Two component transcriptional regulator, LytTR f... 233 4e-60 UniRef50_Q15WR1 Response regulator receiver protein n=1 Tax=Pseu... 233 4e-60 UniRef50_Q025Y4 Response regulator receiver protein n=1 Tax=Cand... 233 4e-60 UniRef50_C6PCY4 Two component transcriptional regulator, LytTR f... 233 4e-60 UniRef50_Q3SM66 Response regulator receiver domain protein (CheY... 232 5e-60 UniRef50_C9NAB5 Two component transcriptional regulator, LytTR f... 232 6e-60 UniRef50_D2QEL1 Two component transcriptional regulator, LytTR f... 232 6e-60 UniRef50_Q028U9 Response regulator receiver protein n=1 Tax=Cand... 232 8e-60 UniRef50_C7M7B0 Two component transcriptional regulator, LytTR f... 232 9e-60 UniRef50_B0MWM6 Putative uncharacterized protein n=2 Tax=Bactero... 232 1e-59 UniRef50_B1KPY2 Two component transcriptional regulator, LytTR f... 232 1e-59 UniRef50_A0Y0Z9 Response regulator of the LytR/AlgR family prote... 231 1e-59 UniRef50_A6LQW3 Two component transcriptional regulator, LytTR f... 231 2e-59 UniRef50_D2QUQ7 Two component transcriptional regulator, LytTR f... 230 2e-59 UniRef50_B9E9A6 Putative uncharacterized protein n=1 Tax=Macroco... 230 2e-59 UniRef50_C6W252 Two component transcriptional regulator, LytTR f... 230 2e-59 UniRef50_A6EIX0 Two-component system response regulator n=1 Tax=... 230 3e-59 UniRef50_D2MJZ8 Transcriptional regulator, LytR/AlgR family n=1 ... 230 3e-59 UniRef50_Q182U2 Two-component response regulator n=5 Tax=Clostri... 230 4e-59 UniRef50_D0LSR9 Two component transcriptional regulator, LytTR f... 229 5e-59 UniRef50_Q11YH0 Response regulator n=1 Tax=Cytophaga hutchinsoni... 229 5e-59 UniRef50_C5C1Z4 Two component transcriptional regulator, LytTR f... 229 6e-59 UniRef50_A4BAR2 Alginate biosynthesis regulatory protein AlgR-li... 229 8e-59 UniRef50_C7PII0 Two component transcriptional regulator, LytTR f... 229 8e-59 UniRef50_A8F4Q4 Two component transcriptional regulator, LytTR f... 229 9e-59 UniRef50_C1AAC5 LytT family two-component response regulator n=1... 228 1e-58 UniRef50_Q479S3 Transcriptional regulator, LytR/AlgR family n=3 ... 228 1e-58 UniRef50_D2QPM9 Two component transcriptional regulator, LytTR f... 228 1e-58 UniRef50_Q5R0R5 Response regulator of the LytR/AlgR family n=1 T... 227 2e-58 UniRef50_Q04FG9 Response regulator of the LytR/AlgR family n=2 T... 227 2e-58 UniRef50_A7T6N4 Predicted protein n=4 Tax=cellular organisms Rep... 227 2e-58 UniRef50_A3YCL0 Response regulator n=1 Tax=Marinomonas sp. MED12... 227 2e-58 UniRef50_C6W0C7 Two component transcriptional regulator, LytTR f... 227 3e-58 UniRef50_C0INH2 Two-component system response regulator protein ... 226 4e-58 UniRef50_C0Z807 Two-component response regulator n=1 Tax=Breviba... 226 4e-58 UniRef50_C7MZZ5 Response regulator of the LytR/AlgR family n=3 T... 226 4e-58 UniRef50_C7PS97 Two component transcriptional regulator, LytTR f... 226 4e-58 UniRef50_Q7P1K6 Probable two-component system, regulatory protei... 226 4e-58 UniRef50_A1ZK58 Two-component system response regulator protein ... 226 5e-58 UniRef50_A1ZQ18 Transcriptional regulator protein n=1 Tax=Micros... 226 5e-58 UniRef50_A6ER53 Putative two-component system response regulator... 226 5e-58 UniRef50_D2QR47 Two component transcriptional regulator, LytTR f... 226 6e-58 UniRef50_Q3BTS0 Two-component system regulatory protein n=2 Tax=... 225 6e-58 UniRef50_B9TLS0 Positive alginate biosynthesis regulatory protei... 225 8e-58 UniRef50_C6VU69 Two component transcriptional regulator, LytTR f... 225 8e-58 UniRef50_C7PA86 Two component transcriptional regulator, LytTR f... 225 9e-58 UniRef50_C6IC21 Two-component system response regulator n=14 Tax... 225 1e-57 UniRef50_C6Y3C9 Response regulator receiver n=1 Tax=Pedobacter h... 225 1e-57 UniRef50_C6W312 Two component transcriptional regulator, LytTR f... 225 1e-57 UniRef50_C1ACS0 LytT family two-component response regulator n=1... 225 1e-57 UniRef50_C7PNX8 Two component transcriptional regulator, LytTR f... 225 1e-57 UniRef50_D2QI00 Two component transcriptional regulator, LytTR f... 225 1e-57 UniRef50_C7PMC2 Two component transcriptional regulator, LytTR f... 224 2e-57 UniRef50_A8UEA9 Two-component system response regulator n=1 Tax=... 224 2e-57 UniRef50_A1ZS31 Two-component system response regulator n=1 Tax=... 224 3e-57 UniRef50_D2QJ93 Two component transcriptional regulator, LytTR f... 224 3e-57 UniRef50_B0RWJ0 Transcriptional regulator protein n=11 Tax=Prote... 222 7e-57 UniRef50_A4CHH8 LytTr DNA-binding domain family protein n=5 Tax=... 221 1e-56 UniRef50_C6XVI3 Response regulator receiver n=2 Tax=Sphingobacte... 221 1e-56 UniRef50_Q1YSU3 Two-component system regulatory protein n=1 Tax=... 221 1e-56 UniRef50_Q21DS4 Response regulator receiver n=2 Tax=Alteromonada... 221 1e-56 UniRef50_C5ETQ4 Sensory transduction protein lytT n=5 Tax=Clostr... 221 2e-56 UniRef50_A9WL18 Two-component response regulator n=4 Tax=Microco... 221 2e-56 UniRef50_C6VTD2 Two component transcriptional regulator, LytTR f... 220 2e-56 UniRef50_C6XX74 LytTr DNA-binding region n=5 Tax=Bacteroidetes R... 220 2e-56 UniRef50_Q1VYF8 Two-component system response regulator protein ... 220 2e-56 UniRef50_D2QDG4 Two component transcriptional regulator, LytTR f... 220 2e-56 UniRef50_Q8A855 Two-component system response regulator n=1 Tax=... 220 2e-56 UniRef50_A6G9H1 LytTr DNA-binding domain family protein n=1 Tax=... 220 3e-56 UniRef50_D2QTU6 Two component transcriptional regulator, LytTR f... 220 3e-56 UniRef50_A3UEG7 Two-component system regulatory protein n=1 Tax=... 220 3e-56 UniRef50_A4A4S8 Two-component system, regulatory protein n=1 Tax... 220 3e-56 UniRef50_D2QHW7 Two component transcriptional regulator, LytTR f... 220 4e-56 UniRef50_A6EI22 Response regulator n=1 Tax=Pedobacter sp. BAL39 ... 220 4e-56 UniRef50_D2QDN3 Two component transcriptional regulator, LytTR f... 220 4e-56 UniRef50_A1ZI08 Two-component system response regulator n=3 Tax=... 219 5e-56 UniRef50_A1ZFR4 Two-component system response regulator protein ... 219 7e-56 UniRef50_A8UNX0 Two-component system response regulator protein ... 219 8e-56 UniRef50_C6XUE8 LytTr DNA-binding region n=2 Tax=Pedobacter RepI... 217 2e-55 UniRef50_A5FIV7 Two component transcriptional regulator, LytTR f... 217 2e-55 UniRef50_C6W213 Two component transcriptional regulator, LytTR f... 217 2e-55 UniRef50_A8UPH3 Response regulator n=2 Tax=Bacteroidetes RepID=A... 217 3e-55 UniRef50_A6G241 Response regulator receiver protein n=1 Tax=Ples... 217 3e-55 UniRef50_A5FL89 Transcriptional regulator, LytR/AlgR family n=1 ... 217 4e-55 UniRef50_A0LTS8 Response regulator receiver protein n=1 Tax=Acid... 216 4e-55 UniRef50_B3JKI8 Putative uncharacterized protein n=3 Tax=Bactero... 216 4e-55 UniRef50_A6FYA0 LytTr DNA-binding domain family protein n=1 Tax=... 216 5e-55 UniRef50_C0YLA6 Two-component response regulator n=1 Tax=Chryseo... 216 5e-55 UniRef50_A5FHY1 Two component transcriptional regulator, LytTR f... 216 6e-55 UniRef50_A3HT26 Two-component system response regulator n=1 Tax=... 216 6e-55 UniRef50_A6LDC2 Two-component system response regulator protein ... 215 7e-55 UniRef50_Q39P82 Transcriptional regulator, LytR/AlgR family n=21... 215 8e-55 UniRef50_C6Y0P9 Response regulator receiver n=2 Tax=Pedobacter R... 215 8e-55 UniRef50_C7PT73 Two component transcriptional regulator, LytTR f... 215 8e-55 UniRef50_Q2RI16 Transcriptional regulator, LytR/AlgR family n=1 ... 215 9e-55 UniRef50_C6XYH6 LytTr DNA-binding region n=5 Tax=Sphingobacteria... 215 1e-54 UniRef50_C6BHH2 Two component transcriptional regulator, LytTR f... 215 1e-54 UniRef50_A1ZKV0 Two-component system response regulator protein ... 215 1e-54 UniRef50_A6LH97 Two-component system response regulator n=26 Tax... 215 1e-54 UniRef50_A8UFS0 Two-component system response regulator n=2 Tax=... 215 1e-54 UniRef50_B2V8S8 Two component transcriptional regulator, LytTR f... 215 1e-54 UniRef50_A7AJK4 Putative uncharacterized protein n=2 Tax=Parabac... 214 2e-54 UniRef50_C6WYV3 Two component transcriptional regulator, LytTR f... 214 2e-54 UniRef50_C5PVL6 LytTR family two component transcriptional regul... 214 3e-54 UniRef50_A7HMG0 Two component transcriptional regulator, LytTR f... 214 3e-54 UniRef50_C6VRP4 Two component transcriptional regulator, LytTR f... 214 3e-54 UniRef50_Q3IEB4 Putative alginate biosynthesis regulatory protei... 214 3e-54 Sequences not found previously or not previously below threshold: UniRef50_C1AA08 LytT family two-component response regulator n=2... 239 5e-62 >UniRef50_P0AFT7 Uncharacterized response regulatory protein yehT n=180 Tax=Proteobacteria RepID=YEHT_ECO57 Length = 239 Score = 292 bits (749), Expect = 6e-78, Method: Composition-based stats. Identities = 239/239 (100%), Positives = 239/239 (100%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI Sbjct: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS Sbjct: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR Sbjct: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 Query: 181 TLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL 239 TLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL Sbjct: 181 TLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL 239 >UniRef50_Q2RYN6 Two-component system response regulator protein n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RYN6_SALRD Length = 322 Score = 286 bits (732), Expect = 6e-76, Method: Composition-based stats. Identities = 86/252 (34%), Positives = 136/252 (53%), Gaps = 17/252 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ LIVDDEPLAR +R ++ D+ I+GE ++ E + + PD++FLD+QMP +S Sbjct: 68 IRALIVDDEPLARTGVRQLVEPLDDVTILGEATDGDEAVRQIEAQAPDLVFLDVQMPEMS 127 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GLE+V + E P +F+TA+D+YA+ AFE HA DYLLKPI+E R E+ + R RQ+ + Sbjct: 128 GLEVVREVGVEAMPLTIFVTAYDQYALDAFEAHALDYLLKPIEEDRFEEAMERARQQLRQ 187 Query: 122 QDVSLLPENQQ-------------ALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSH 168 + L E + ++ RIY + +DV ++ S V + Sbjct: 188 VEADTLNEQLRGVLREYADAGETGGIERFTIRSRDRIYFVDAEDVQWIESEGDYVALHDG 247 Query: 169 EGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPV 225 + T++ LE + LR HR Y+VN+ H+ E+R D+G +L + NG + Sbjct: 248 DD-AHLVRKTMKKLEEQLDPDQFLRVHRSYIVNVEHIDELRPLDHGTYQLRMANGTPLKT 306 Query: 226 SRRYLKSLKEAI 237 SR Y ++ + Sbjct: 307 SRGYSDNIDALL 318 >UniRef50_C6CMQ8 Two component transcriptional regulator, LytTR family n=3 Tax=Dickeya RepID=C6CMQ8_DICZE Length = 241 Score = 284 bits (727), Expect = 2e-75, Method: Composition-based stats. Identities = 160/239 (66%), Positives = 202/239 (84%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+ VLIVDDEPLAR+NLR L++ +E+VGEC+NAVE I A+H+L PDV+FLDIQMPRI Sbjct: 1 MLSVLIVDDEPLARDNLRCLLEQDDGLELVGECANAVEAISAIHRLHPDVVFLDIQMPRI 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SGLEM+GM+DP++ PYIVF+TA+DEYAIKAFEE AFDYLLKPID RL KTL L +ER Sbjct: 61 SGLEMIGMIDPDNMPYIVFITAYDEYAIKAFEEQAFDYLLKPIDPQRLAKTLRNLHRERP 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 Q++ L ++Q+ L +IPCTGHSRIYL++ +V F SR SGVYVT +G+E FTELTL+ Sbjct: 121 AQNIDTLSDHQRGLDYIPCTGHSRIYLMKSSEVQFARSRQSGVYVTGPQGEECFTELTLK 180 Query: 181 TLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL 239 TLESRTPL+RCHRQYLVN+ HL+EIRLE++GQAE++L++G +PVSRRYLK+LK+ +GL Sbjct: 181 TLESRTPLVRCHRQYLVNMDHLREIRLEESGQAEILLKSGQALPVSRRYLKTLKQLLGL 239 >UniRef50_B5JNB1 LytTr DNA-binding domain family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JNB1_9BACT Length = 253 Score = 276 bits (706), Expect = 6e-73, Method: Composition-based stats. Identities = 83/248 (33%), Positives = 130/248 (52%), Gaps = 13/248 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K+LIVDDEP AR L++FL + + E +N E + + PD+ FLDIQMP ++ Sbjct: 5 LKILIVDDEPPARAKLKLFLSDCLPDATLYEAANGTEALELLESAAPDLAFLDIQMPGMT 64 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GLE+V PE P ++F TA+D+YA+KAFE +A DYLLKP D+ R K L + + Sbjct: 65 GLEVVEAFGPEEMPPLIFTTAYDQYAVKAFEHNAVDYLLKPFDDRRFRKALDKATSKLVP 124 Query: 122 Q---------DVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 ++ + L+ I + RI + + D+ ++ + V + K Sbjct: 125 SPTLDSALLTQLAASIQQPSYLERIMVRENDRIIPILVSDIHWLEADDKYVRIHLSTSKR 184 Query: 173 GFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRY 229 T+ LE R +R HR +VNL +QE+ +G ++ L++G T+P+SRRY Sbjct: 185 Y-IRNTISNLEKRLDTKNFVRTHRSTIVNLDQIQELESLTHGDYQIRLKSGTTLPLSRRY 243 Query: 230 LKSLKEAI 237 LK+ Sbjct: 244 ADHLKDNF 251 >UniRef50_C9RCQ8 Two component transcriptional regulator, LytTR family n=1 Tax=Ammonifex degensii KC4 RepID=C9RCQ8_AMMDK Length = 265 Score = 274 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 89/252 (35%), Positives = 129/252 (51%), Gaps = 16/252 (6%) Query: 3 KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 ++VDDEPLAR+ L+ L + +I+GE NA E + V +LRPDV+FLDI+M SG Sbjct: 4 TAIVVDDEPLARDELKYLLSFHPECQIIGEADNAEEALKLVVELRPDVVFLDIRMRGTSG 63 Query: 63 LEMVGM-LDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 E L H P +VF TA+D+YA+ AFE A DY+LKP + RL +T+ RL +S+ Sbjct: 64 FEAAKRMLSLPHPPLVVFATAYDDYAVGAFELGAVDYILKPFEPERLAQTVRRLSSFKSQ 123 Query: 122 QD---------VSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 LL E LK +P I L+ +D+ F + V + + Sbjct: 124 SARWEEALERLSQLLEEGPPKLKKLPVEKEGEIRLIPYQDIIFAQAHEGEALVHTAN-EY 182 Query: 173 GFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT--VPVSR 227 + TL LE R LR H+ +LVNLA + + G +I+ + +PVS+ Sbjct: 183 FYYRGTLAELEGRLKNHGFLRVHKSFLVNLARIGGLVPWFKGTYWVIMEDDKRTHIPVSK 242 Query: 228 RYLKSLKEAIGL 239 +K LK +GL Sbjct: 243 AQVKQLKALLGL 254 >UniRef50_B0TBI1 Sensory transduction protein lytt n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TBI1_HELMI Length = 238 Score = 272 bits (697), Expect = 7e-72, Method: Composition-based stats. Identities = 79/243 (32%), Positives = 132/243 (54%), Gaps = 12/243 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +KV+I +DEPL+RE L L++ D+E+ N E + + +P ++FLDI+MP ++ Sbjct: 1 MKVMIAEDEPLSREELEYLLRQAEDVELCPSARNGKELLRLQKEHQPQLIFLDIEMPELN 60 Query: 62 GLEMVGMLDPEH-RPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+E V L P I+F TA+++YA++AF A DYLLKP+DE RL ++L R RQ Sbjct: 61 GVEAVRQLAEASAPPLIIFTTAYEQYAVEAFGLRALDYLLKPVDEERLFESLQRARQRLQ 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + P + I ++ +++ + + + V + G+ T LT++ Sbjct: 121 ESAPPKTPISN-----ILLEEGDKLIVVKPERIYYAEKEERRVVIYCDRGR-FETRLTMQ 174 Query: 181 TLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILR--NGLTVPVSRRYLKSLKE 235 L+ + P +RCHR +LVNL ++ EI NG +IL+ G +PVSR K++ + Sbjct: 175 ELQDKLSGHPFVRCHRSFLVNLDYVDEIEPWQNGTYNIILKGIGGTKLPVSRSAAKNVLQ 234 Query: 236 AIG 238 + Sbjct: 235 RLN 237 >UniRef50_A4A8V2 Sensory transduction protein lytR n=2 Tax=unclassified Gammaproteobacteria RepID=A4A8V2_9GAMM Length = 274 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 78/270 (28%), Positives = 131/270 (48%), Gaps = 35/270 (12%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + +IVDDE LAR L + LQ+ +++++ EC N E + AV + PD+LFLDIQMP + Sbjct: 4 LSAIIVDDEHLARRGLSMRLQQLPEVDVIAECGNGQEALLAVAQHSPDLLFLDIQMPGMD 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E+V L + P ++F+TA++EYA+ AF+ HA DY+LKPI++ RL + + R R + Sbjct: 64 GFEVVENLQGDDMPMVIFVTAYNEYAVDAFKVHAIDYVLKPIEDDRLHEAVQRAVAHRDQ 123 Query: 122 QDVSLLPE-------------------------------NQQALKFIPCTGHSRIYLLQM 150 ++ + E + I + I +++ Sbjct: 124 ENSTSGKEKLIKLLMSVTGESAAGIEAMAEGVSTEGASSQDSWPEKITVKDGNDIQFIRV 183 Query: 151 KDVAFVSSRMSGVYVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRL 207 D+ +V + + + GK +T++ LE+ LR HR +VN + + Sbjct: 184 ADIEWVDAAGDYMCIH-ATGKTHIMRITMKQLEAMLNPALFLRVHRSTIVNNRCVTGAQT 242 Query: 208 EDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 NG+ L L G + VSR Y ++E + Sbjct: 243 LTNGEYLLNLEGGTQLKVSRSYKDRIREFL 272 >UniRef50_Q2RH27 Transcriptional regulator, LytR/AlgR family n=2 Tax=Clostridia RepID=Q2RH27_MOOTA Length = 255 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 85/252 (33%), Positives = 135/252 (53%), Gaps = 16/252 (6%) Query: 3 KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 ++VDD+PLAR+ L+ L + +++GE + E + V +L PDV+FLDI+M +SG Sbjct: 4 TAVVVDDQPLARDELKYLLSAYEECQVIGEAEDGGEALQLVARLHPDVVFLDIEMRGMSG 63 Query: 63 LEMVGM-LDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 + L P IVF TA++EYA+ AFE A DYLLKP + RL KT+ R++ +++ Sbjct: 64 YDAARKMLAEPKPPLIVFATAYNEYAVGAFELGAIDYLLKPFVDERLAKTIERIKNLKAR 123 Query: 122 QD---------VSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 Q+ LL +NQQ++K +P + I LL D+ + +R GV V + + Sbjct: 124 QEDWQEAVARVARLLEDNQQSVKKLPVEKNGAIKLLDYGDIFYGRARGGGVQVFTTDD-S 182 Query: 173 GFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN--GLTVPVSR 227 T+ LE R R H+ +LVNL ++ + G L++ + +PVS+ Sbjct: 183 YTFSGTMAELEERLNREGFFRVHKSFLVNLRKVEGVLPWFKGTYWLVMGDRKRTQIPVSK 242 Query: 228 RYLKSLKEAIGL 239 +K LK +GL Sbjct: 243 GQVKELKVLLGL 254 >UniRef50_B8KHY1 Response regulator n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KHY1_9GAMM Length = 262 Score = 267 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 87/262 (33%), Positives = 132/262 (50%), Gaps = 27/262 (10%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++VLIVDDEPLAR+ L L+ ++E+VG S+ E + + RPDVL LDI+MP ++ Sbjct: 1 MRVLIVDDEPLARDLLLEHLKANPEVEVVGAASSGREALVFIRSHRPDVLLLDIEMPGMN 60 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER- 119 G +V L +H P ++F+TAFD YA+ AF+++A DY+LKP+D ARL+K L R R Sbjct: 61 GFALVESLQADDHMPLVIFVTAFDRYAVDAFDKNAVDYILKPVDGARLQKALLRARGRLL 120 Query: 120 ---------------------SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSS 158 + L A+ +P + LL++ D+ +V + Sbjct: 121 DGSKAKLLRAITAVGQQPGREALSVAEALDSYSDAVGRLPVRQGDSVQLLELDDIEWVDA 180 Query: 159 RMSGVYVTSHEGKEGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAEL 215 + V G+ T++ L R P R HR LVNL +QEI G+ L Sbjct: 181 AGDYMCVH-AGGETYILRCTMKQLSDRLSLGPFARIHRSTLVNLNKIQEITPLSKGECLL 239 Query: 216 ILRNGLTVPVSRRYLKSLKEAI 237 L N + VSR Y +++ + Sbjct: 240 HLGNDTRLKVSRNYRSAIQHLL 261 >UniRef50_A7HAA1 Two component transcriptional regulator, LytTR family n=2 Tax=Deltaproteobacteria RepID=A7HAA1_ANADF Length = 236 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 113/239 (47%), Positives = 154/239 (64%), Gaps = 3/239 (1%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M++ LIVDDEP AR LR L++ +EI GEC NAVE + AV + RPDVLFLD+QMP + Sbjct: 1 MMRALIVDDEPGARAELRALLEQTGAVEIAGECPNAVEALNAVQRERPDVLFLDVQMPVV 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G E++ MLD + P +VF+TA D +A++AFEE A DYLLKP+ RL KT+ +L + S Sbjct: 61 NGFELLAMLDEDVLPAVVFVTAHDAFALRAFEESAADYLLKPVTRERLAKTVEKLARRTS 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 +P L +PC I L+ + +V V S +GVYV + G E T+LTLR Sbjct: 121 PAPRPTVPAPP--LTRVPCLAGKAIKLVPLAEVDHVRSSAAGVYVVTAAG-EFLTDLTLR 177 Query: 181 TLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL 239 LE R L+RCH+Q+LVNL + EIR ++ A + R G VPVSRR+L +L+E +GL Sbjct: 178 VLEERGGLVRCHKQHLVNLERIDEIRPGEDPAATVRTRAGHLVPVSRRFLAALRERLGL 236 >UniRef50_Q21NI5 Response regulator receiver n=2 Tax=Alteromonadales RepID=Q21NI5_SACD2 Length = 265 Score = 266 bits (682), Expect = 4e-70, Method: Composition-based stats. Identities = 75/256 (29%), Positives = 131/256 (51%), Gaps = 21/256 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ +IV+DEP+A ++ LQ IEIVGE N + + + ++PD++FLDIQMP ++ Sbjct: 9 LRTVIVEDEPIAMLQMKSMLQGCPTIEIVGEARNGKQALDVIQDVQPDLVFLDIQMPVLT 68 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E++ L + P IVF TA++EYA++AF+ HA DYLLKP E RL K LAR+ + Sbjct: 69 GFEVLKALQGDTLPLIVFTTAYEEYAVQAFDLHAVDYLLKPFSEERLNKALARVMERWQL 128 Query: 122 QDVSLLPENQQALKFI-----------------PCTGHSRIYLLQMKDVAFVSSRMSGVY 164 + QA++FI + L+ ++ +V + + Sbjct: 129 AEEDQKGTLLQAVEFILNKGEGPSVSAGAEPKLAIKESGEVLLIPQTEIDWVDAAGDYMC 188 Query: 165 VTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL 221 + S G+ T++ L + R HR +VN+ + ++ G++ L+L G Sbjct: 189 IHSK-GQTHIQRCTMKQLLEKLDSRRFCRIHRSTVVNVDRITKVIPHTKGESFLMLDCGE 247 Query: 222 TVPVSRRYLKSLKEAI 237 + VSR +++++ + Sbjct: 248 KLKVSRNCREAIQQFL 263 >UniRef50_C5WEM5 Two-component response regulator n=1 Tax=Streptococcus dysgalactiae subsp. equisimilis GGS_124 RepID=C5WEM5_STRDG Length = 242 Score = 266 bits (681), Expect = 4e-70, Method: Composition-based stats. Identities = 76/243 (31%), Positives = 130/243 (53%), Gaps = 6/243 (2%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +KV+I+DDEPLAR L ++E + + + + + + +PD+LFLDI + S Sbjct: 1 MKVVIIDDEPLARMELAYLVEETQMVSAIYQGESIEDAFQLILTHQPDLLFLDIHLTDES 60 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GL++ L + P I+F TA+D +A++AFE +A DY+LKP ++AR++K +A+ + Sbjct: 61 GLDLAKRLSQIPNAPLIIFATAYDNHAVEAFEVNAIDYVLKPFEQARIQKAIAKAKMTLD 120 Query: 121 KQDVSLLPENQ-QALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 +Q + E + K + RIYLL D+ + + V + + +L Sbjct: 121 RQQTNHSKEAEVPQTKRLTLEVDERIYLLPFSDILYCEVQGKETTVYTKTA-HYTSHTSL 179 Query: 180 RTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEA 236 +E L+ HR YL+N ++EI+ N ++ + NG VPVSR YLK+ ++ Sbjct: 180 SAIEKVLTTESFLKVHRSYLINTQAIKEIQPWFNQTYQVTMINGGKVPVSRSYLKTFRQR 239 Query: 237 IGL 239 +GL Sbjct: 240 LGL 242 >UniRef50_B1ZQK1 Two component transcriptional regulator, LytTR family n=2 Tax=Opitutus terrae PB90-1 RepID=B1ZQK1_OPITP Length = 255 Score = 265 bits (679), Expect = 9e-70, Method: Composition-based stats. Identities = 74/247 (29%), Positives = 126/247 (51%), Gaps = 12/247 (4%) Query: 3 KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 + LIVDDEPLARE L+ LQ Q+ +E+ GEC + + + + + RPD++FLD+QMP SG Sbjct: 5 RALIVDDEPLARERLQRLLQRQNTVELAGECGDGPDALATIERERPDIVFLDVQMPGCSG 64 Query: 63 LEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSKQ 122 L++ L RP I+F+TA + +A++AF A DYLLKP DE RL + + R + + Sbjct: 65 LDVANQLPATARPAIIFVTAHERFAVEAFAARAVDYLLKPFDEERLHQAVERALELLQSR 124 Query: 123 DVS---------LLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 L + + I RI ++ ++V ++ + + + + Sbjct: 125 QAREVETRLESILAQVQPRVPERIAVRVDGRIVFVKPREVVWIEAANNYCVLHLTDAPRL 184 Query: 174 FTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYL 230 +L ++E R R R +V ++E+ + G+ ++L NG +P+SR Sbjct: 185 MLRESLGSVEQRLGAANFARISRSAVVRSDQIKELESANYGEYVVVLLNGTRLPLSRYRR 244 Query: 231 KSLKEAI 237 L+ A+ Sbjct: 245 NELERAL 251 >UniRef50_Q82Z76 Sensory transduction protein lytT n=22 Tax=Enterococcus faecalis RepID=LYTT_ENTFA Length = 242 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 83/242 (34%), Positives = 133/242 (54%), Gaps = 5/242 (2%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + VLIVDDEPLARE L + + + V E + E + + +PD+LFLDI + S Sbjct: 1 MHVLIVDDEPLAREELSYLVSQHPQVTSVAEADSVAEAMEEMMDQKPDLLFLDIHLTDES 60 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G ++ L + PY+VF TA+D+YA+KAF+ +A DY+LKP +E ++ + + + +E Sbjct: 61 GFDLAEKLTHLKKAPYLVFATAYDQYALKAFQVNAKDYILKPFEEEKITQVIEKASKEMG 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + E + IP G RIYL+ +D+ VS + + + + TL Sbjct: 121 QAVPENTAEKGPKSEAIPIQGEDRIYLVAPEDIYLVSVEERQLSIFV-DQQVYKMTGTLN 179 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 ++E + P ++ HR +++N +QEI+ N ++IL NG VPVSR Y+K KE + Sbjct: 180 SIEQKLPATLFIKTHRSFILNRTKIQEIQPWFNNTLQVILTNGSKVPVSRSYVKEFKEKL 239 Query: 238 GL 239 GL Sbjct: 240 GL 241 >UniRef50_B4CWB7 Two component transcriptional regulator, LytTR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWB7_9BACT Length = 250 Score = 264 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 72/237 (30%), Positives = 122/237 (51%), Gaps = 11/237 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+VL+VDDE + R LR L+ + D++++GEC++ +E + + DVLFLDI MP + Sbjct: 4 IRVLLVDDERIGRHRLRQLLEREPDMKVIGECADGLEALAFLQAQPADVLFLDINMPGMD 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E++ L+ + P +VF+TA+D++A++AFE A DYLLKP RL K L R+R+ + Sbjct: 64 GFELLDRLEQKPEPLVVFVTAYDDHAVRAFEACALDYLLKPFSPERLAKALLRVRERMNA 123 Query: 122 QDVSLLPENQQAL-------KFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF 174 +++ ++ R+ + + +V + + GK Sbjct: 124 RELESESPHRATESAALSESPRFVVRSGGRVAFVDAGQIDWVEAAGNYAIFHVG-GKNHM 182 Query: 175 TELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRR 228 T+ LE++ P +R R +VNL ++ + G +L NG VPV+R Sbjct: 183 IRETMSALEAQLPPERFMRMSRSAIVNLTRIKALETSPGGGDCAVLSNGQRVPVTRS 239 >UniRef50_Q67QS1 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QS1_SYMTH Length = 256 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 90/256 (35%), Positives = 138/256 (53%), Gaps = 18/256 (7%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M++ LIVDDE AR LR L + D+E++GE +NA E + ++ L DV+FLD+QMP + Sbjct: 1 MLRALIVDDEYPARMELRYQLSQFPDVEVIGEATNAREAMALINALDYDVIFLDVQMPGM 60 Query: 61 SGLEMVGMLD-PEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +G+E+ L P +VF+TA++ YA+ AFE A DYLLKPI+ RL +T+ RLR+ + Sbjct: 61 TGIELAKSLKGRPVMPKVVFVTAYENYAVSAFEIPATDYLLKPIEAERLGETIQRLREAK 120 Query: 120 SKQDVSLLPE-----------NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSH 168 PE ++ L F+ C + L + ++ ++ S VYV ++ Sbjct: 121 EAAAGEARPEASEGAERPAGASKPQLTFLMCEKDDKQIPLPLNEIVYIFSEGYNVYVQTY 180 Query: 169 EGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL--TV 223 + T TL+ L R P R HR YLVN+ ++EI NG L L++ V Sbjct: 181 -SERYLTRHTLQELTERLPSSQFFRSHRSYLVNIYQVKEISPYFNGAYILKLKDKEHSEV 239 Query: 224 PVSRRYLKSLKEAIGL 239 VSR +K +K+ + Sbjct: 240 IVSRSNVKRMKQLFSM 255 >UniRef50_Q2S4J5 Response regulator n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S4J5_SALRD Length = 248 Score = 263 bits (673), Expect = 4e-69, Method: Composition-based stats. Identities = 70/250 (28%), Positives = 125/250 (50%), Gaps = 17/250 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ LIVDDEP AR ++ +L+E IE+ GEC I A+++ PD++FLD+QMP + Sbjct: 1 MRALIVDDEPPARSLIQEYLEEIGRIEVTGECGTGRAAIEAINETAPDLVFLDVQMPGLD 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G +++ + + P I+F TA+DEYAI+AFE A DYLLKP AR + + R + + Sbjct: 61 GFDVLERI--DTLPDIIFSTAYDEYAIEAFEAGAVDYLLKPYTRARFQTAVERALERHDR 118 Query: 122 QD-----------VSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEG 170 D E + + + +I + D+ +V + + + + Sbjct: 119 DDDAYADQLATLLQEAKAETDDSPERLYVRHGDKIIPVDPDDIRWVEAAGDYSKLHT-DE 177 Query: 171 KEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSR 227 + + + LE R +R HR +++ + + + +G + +L +G TV VSR Sbjct: 178 TTYLSSMGIGALEDRLAPTRFMRVHRSHILAFPAIDYLYSDGSGGYKAVLDDGTTVRVSR 237 Query: 228 RYLKSLKEAI 237 Y +++ + Sbjct: 238 SYAPEIRDRL 247 >UniRef50_Q1IUM5 Transcriptional regulator, LytR/AlgR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IUM5_ACIBL Length = 317 Score = 262 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 72/247 (29%), Positives = 135/247 (54%), Gaps = 15/247 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ +IV+DEPLA L+ L + I ++G +N E + + KL+P+V+FLD+Q+P S Sbjct: 63 LRAVIVEDEPLATMKLKKLLDGEPGIRVMGHAANIDEAVAQIRKLQPNVIFLDVQLPGGS 122 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR----- 116 G E++ L +RP I+F TA+D+YAIKAF+ HA DYLLKP D+ RL + + + R Sbjct: 123 GFEVLDRLPEANRPCIIFTTAYDQYAIKAFDLHAADYLLKPFDQERLHRAIEKARVQAAG 182 Query: 117 -------QERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHE 169 Q +K +L + + + R+ L+ ++ ++ + + V++ Sbjct: 183 PVDKEWTQRLAKLIETLPKNGRNPEERLVFKSGGRVLFLEQDEIEWIEAASNYVHIHCGG 242 Query: 170 GKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVS 226 T+R +E+R +R HR +VN+ ++E++ ++G+ +++++G + S Sbjct: 243 NVVHSVRNTIRDVETRLNPLKFIRVHRSIIVNVNRIKELQPCNSGEHVVVMKSGKELSCS 302 Query: 227 RRYLKSL 233 R Y ++ Sbjct: 303 RTYRMAI 309 >UniRef50_B1ZMA5 Two component transcriptional regulator, LytTR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZMA5_OPITP Length = 268 Score = 262 bits (672), Expect = 6e-69, Method: Composition-based stats. Identities = 75/249 (30%), Positives = 119/249 (47%), Gaps = 18/249 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ +IVDDEP AR +R+ L + +IE+VGE E + + + RP + FLD+QMP Sbjct: 16 IRTIIVDDEPAARRGVRLLLAQDPEIELVGEAGTGAEAVTLIERERPALAFLDVQMPGGD 75 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E + + P IVF+TA+DE+A++AFE +A DYLLKP D+AR L R + + Sbjct: 76 GFETLAQVGVAAAPVIVFVTAYDEHALRAFEVNAIDYLLKPYDDARFRAALERAKGAVRQ 135 Query: 122 QDVSLLPEN--------------QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTS 167 + A + I L+ ++ ++ + V Sbjct: 136 RRGEAESARWHQLVRELATARRSAAASGRVVVKTAGEILFLKPDEIDWIEAEGDYVKFH- 194 Query: 168 HEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVP 224 + T+ LE+R +R HR +VNL LQ++ G+ +ILR+G + Sbjct: 195 AGSRGYLMRETMTQLEARLDPQQFVRIHRSAIVNLDRLQKLSPSFAGEYAVILRDGTKLK 254 Query: 225 VSRRYLKSL 233 +SR Y + Sbjct: 255 LSRGYHARI 263 >UniRef50_C7PM85 Two component transcriptional regulator, LytTR family n=3 Tax=Sphingobacteriales RepID=C7PM85_CHIPD Length = 246 Score = 262 bits (670), Expect = 8e-69, Method: Composition-based stats. Identities = 79/249 (31%), Positives = 139/249 (55%), Gaps = 13/249 (5%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MIK +I+DDEPLARE ++ +LQ S I+++ EC + EG+ A+ + +PD++FLD+QMP+I Sbjct: 1 MIKAVIIDDEPLAREIVKEYLQSFSQIQLMQECGDGFEGLKAIQQQQPDIIFLDVQMPKI 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G EM+ ++ E P ++F TAF+E+AI+AFE +A DYLLKP + R +K +++ R Sbjct: 61 NGFEMLELV--ESLPAVIFTTAFEEHAIRAFEVNAIDYLLKPFSKERFDKAVSKWLDRRV 118 Query: 121 KQDVSLLP-------ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 ++ + + + +I ++ ++D+ ++ + V + + EG Sbjct: 119 ADEMQQTAALLDTAGASPMQSNRVVVKINGKIKIIPVQDIHYLEAADDYVKIVTPEG-TF 177 Query: 174 FTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYL 230 T++ E R HR Y++N+ + I + IL++G VPVS+ Sbjct: 178 LKNKTMQFFEKSLDPQQFARVHRSYMLNVNQVTRIEPYEKENHLAILKSGAKVPVSKTGY 237 Query: 231 KSLKEAIGL 239 LK ++GL Sbjct: 238 PRLKASLGL 246 >UniRef50_Q2S053 LytTr DNA-binding domain family n=2 Tax=Rhodothermaceae RepID=Q2S053_SALRD Length = 278 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 76/261 (29%), Positives = 135/261 (51%), Gaps = 24/261 (9%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ LIVDDEPLARE L L + + + G + E + A+H+ PD++FLD+QMP ++ Sbjct: 8 IRALIVDDEPLARERLHELLTDAPAVTVAGTAEDGFEAVDAIHEQAPDLVFLDVQMPGMN 67 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G++++ + P VF+TA+D+YAIKAF+ A DYLLKP D+ R E+ L R R++ + Sbjct: 68 GIDVIEEIGTADMPVTVFVTAYDQYAIKAFDLAAVDYLLKPFDDERFEEALRRAREQIAN 127 Query: 122 QDVSLLPE--------------------NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMS 161 ++ + + ++ L+ I G + ++ + D+ +++ S Sbjct: 128 REGEAISDRLLRLLQERDPSLLEKESARDEPYLERIAVQGRGKARIVPVDDLTHITADGS 187 Query: 162 GVYVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILR 218 + + + ++TL +R +R HR +V L ++ I G + LR Sbjct: 188 YAELHTGDD-TYVIRERMKTLAARLDPDTFVRVHRSAIVRLDEIELILRGGGGNYAVRLR 246 Query: 219 NGLTVPVSRRYLKSLKEAIGL 239 +G V VSR + L++ +G+ Sbjct: 247 DGTRVSVSRSRVDELQDRLGV 267 >UniRef50_B6R920 Response regulator receiver protein n=2 Tax=Proteobacteria RepID=B6R920_9RHOB Length = 236 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 125/238 (52%), Positives = 168/238 (70%), Gaps = 4/238 (1%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI LIVDDEP ARE L+ L + DIE+ GECSNA++ +G ++K +P ++FLDIQMPRI Sbjct: 1 MISCLIVDDEPYAREELKDLLSKADDIEVTGECSNAIDALGFINKHKPQLVFLDIQMPRI 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SG+EM+GMLDPE P IVF TA+DEYAIKAFE HAFDYLLKPI+E RL KTL+R+R + Sbjct: 61 SGMEMIGMLDPETMPRIVFSTAYDEYAIKAFEHHAFDYLLKPIEEERLAKTLSRVRSDLR 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 Q + + Q L+ +PC +++ ++ + V +V S +SG++V + E T LTL+ Sbjct: 121 PQLMEEII--PQELQHLPCYLGNKLKVVPVHAVEYVFSDLSGIHVATAE-CYVHTHLTLK 177 Query: 181 TLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIG 238 LE RT L RCHRQYLV+ + EI L++ G E++ +G +PVSRRYLKSLK+ G Sbjct: 178 VLEQRTSLARCHRQYLVSPDAISEIVLQETGA-EVVTHSGTKIPVSRRYLKSLKQHFG 234 >UniRef50_B1ZSR0 Two component transcriptional regulator, LytTR family n=9 Tax=Bacteria RepID=B1ZSR0_OPITP Length = 246 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 77/248 (31%), Positives = 123/248 (49%), Gaps = 12/248 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K L+VDDE LAR LR L D+EIVGE +N + + L PD++FLD+QMP S Sbjct: 1 MKALLVDDERLARNELRRLLGAFPDLEIVGEAANGRQARQLLATLTPDLMFLDVQMPGES 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLA-------R 114 G+E++ L P ++F TAFDE+A+KAF+ +A DYLLKP+D ARL + Sbjct: 61 GMELLESL-EPPVPDVIFTTAFDEFAVKAFDLNALDYLLKPVDPARLATAMERLRAKRAA 119 Query: 115 LRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF 174 + A + R + +++K + + S + V + + Sbjct: 120 AALPAGESGAKPNRAPLAAEDKVFVREGDRCWFVEVKSIRLLESEGNYTRVHFDQAQPQL 179 Query: 175 TELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLK 231 +L +E R R +R+ ++NLA + +I +G + L+ G V +SRR + Sbjct: 180 FR-SLNAMEERLDPKYFFRANRRQIINLAWIDKIEPWFSGGLLVHLKGGAKVELSRRQAQ 238 Query: 232 SLKEAIGL 239 +E + L Sbjct: 239 EFRERMSL 246 >UniRef50_B9M2N5 Two component transcriptional regulator, LytTR family n=3 Tax=Geobacter RepID=B9M2N5_GEOSF Length = 251 Score = 259 bits (663), Expect = 5e-68, Method: Composition-based stats. Identities = 80/250 (32%), Positives = 122/250 (48%), Gaps = 13/250 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IK IVDDE ARE LR LQ+ + +VGE + + + + P++LFLDI MP IS Sbjct: 3 IKAFIVDDETPAREELRYLLQQMEGVVVVGEAGSGSTALAGIREANPELLFLDIHMPGIS 62 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+E+ +L P ++F TAF+ YA +AFE A DYLLKP R+ K +++ + Sbjct: 63 GIELAQLLAELPTHPLVIFATAFENYACEAFEVEAVDYLLKPFTLERVAKAVSKAARLMG 122 Query: 121 KQ------DVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF 174 + + ++ +P RI + + F + V+V + + Sbjct: 123 SKLAPGDVTPTAGDGHEGCTGKLPLYQGERIIPTSPERIVFAQADEGAVHVHTATDR-YR 181 Query: 175 TELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELIL--RNGLTVPVSRRY 229 + TL LES+ +R HR +LVN H+ E NG L + RN + VSR + Sbjct: 182 SRSTLTELESKLARHGFVRVHRSFLVNTNHVLEAIPWFNGSFRLTMDDRNRTEIMVSRYH 241 Query: 230 LKSLKEAIGL 239 K LK ++ L Sbjct: 242 AKDLKRSLDL 251 >UniRef50_Q3AA03 DNA-binding response regulator n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AA03_CARHZ Length = 251 Score = 259 bits (663), Expect = 6e-68, Method: Composition-based stats. Identities = 80/250 (32%), Positives = 132/250 (52%), Gaps = 12/250 (4%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI ++VDDEPLARE L+ L+E +E++GE + E + +PDV+FLDI+M + Sbjct: 1 MITAVVVDDEPLAREELKYLLEETERVEVIGEADSGEELFEVLRDRKPDVVFLDIEMYGL 60 Query: 61 SGLEMV-GMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +GL++ +L + P IVF TA+D+YA+KAFE +A DYLLKP R++ TL ++ ++ Sbjct: 61 NGLDVALELLKEKDPPLIVFATAYDQYAVKAFELNALDYLLKPFSAERVKLTLEKIEEKL 120 Query: 120 SKQDVSLLP-----ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF 174 +++ + + + +I L+ +++ FV ++ + K Sbjct: 121 RDKEIYKQKMWQSIQAIAPQQKVFIQTADKILPLKREEIYFVEAQGRYARLRLKN-KWVM 179 Query: 175 TELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG--LTVPVSRRY 229 +L LE ++ H+ +LVN ++EI G L + + VPV R + Sbjct: 180 CRHSLSELEDMLGEKNFVKVHKSFLVNFEQIKEIIPLFGGGLILRMGDDGASEVPVGRTF 239 Query: 230 LKSLKEAIGL 239 LKS KE IGL Sbjct: 240 LKSFKEKIGL 249 >UniRef50_A1ZD68 LytTr DNA-binding response regulator n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZD68_9SPHI Length = 254 Score = 259 bits (662), Expect = 7e-68, Method: Composition-based stats. Identities = 83/252 (32%), Positives = 133/252 (52%), Gaps = 15/252 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IK LIVDDE LAR+ L +FLQE+ D EIVG+CSN +E + + PD+LFLD+QMP + Sbjct: 4 IKTLIVDDEALARDKLAIFLQEEEDFEIVGQCSNGIEALQLLRDSYPDLLFLDVQMPEMD 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+E++ +D + P I+ +TA+D YA++AFE HA DYLLKP D R T+ R++++ Sbjct: 64 GMELLRNIDVQKIPCIILVTAYDNYALQAFEYHALDYLLKPFDRERFLMTIKRVKEQMLL 123 Query: 122 QDVSLLPEN-----------QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEG 170 ++ L+ I +I+ ++ KDV +V S + + + + Sbjct: 124 HSQGNHQTQLLTYLKDSLPKEKYLEKIVVKDGGKIFFVKTKDVEWVESAGNYLKLHIGK- 182 Query: 171 KEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSR 227 T+ E + +R HR LVN+ + + N + + L +G V R Sbjct: 183 SMHLIRETMNAFEQKLNPQEFVRVHRSSLVNIEAIHHLESWGNTEFTITLSSGYQVQSGR 242 Query: 228 RYLKSLKEAIGL 239 Y S+++ + L Sbjct: 243 SYYSSIRQKLQL 254 >UniRef50_B1ZUF0 Two component transcriptional regulator, LytTR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZUF0_OPITP Length = 276 Score = 259 bits (662), Expect = 8e-68, Method: Composition-based stats. Identities = 78/268 (29%), Positives = 133/268 (49%), Gaps = 33/268 (12%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+VLIVDDEPLARE L + + ++G+C++ + + + +LRPD+LFLD+QMP + Sbjct: 4 IRVLIVDDEPLAREGLALMAGADPAVAVIGQCADGLTAVTQIRELRPDLLFLDVQMPGLD 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E++ L P RP ++F+TAF+++AI+AFE A DYLLKP +AR L R ++ + Sbjct: 64 GFEVLAALPPAERPAVIFVTAFEQHAIQAFEVCAVDYLLKPCSDARFASALLRAKEGIRQ 123 Query: 122 QD-----------------------------VSLLPENQQALKFIPCTGHSRIYLLQMKD 152 + + P + I ++ ++ +D Sbjct: 124 RHLGQLSARLEQLLEYVRNLESGASPQAARVAEIQPTAPEPANRIVVKADGALHFIKKQD 183 Query: 153 VAFVSSRMSGVYVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLED 209 V ++ ++ V V + K TL++ E + LR HR ++VNL H++ + Sbjct: 184 VLWIEAQGDFVKVQTAT-KTQLVRETLQSFERKLDPAKFLRIHRSFVVNLDHVRRVETAL 242 Query: 210 NGQAELILRNGLTVPVSRRYLKSLKEAI 237 G + + +G + +SR Y LK + Sbjct: 243 YGDYSVFMADGTKLRLSRNYRGKLKTLL 270 >UniRef50_A1TXX0 Response regulator receiver protein n=3 Tax=Marinobacter RepID=A1TXX0_MARAV Length = 252 Score = 259 bits (662), Expect = 8e-68, Method: Composition-based stats. Identities = 79/239 (33%), Positives = 124/239 (51%), Gaps = 5/239 (2%) Query: 3 KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 +VLI DDEPLAR+ ++ L+ D + GE + + + V +L PD+L LDI+MP + G Sbjct: 8 RVLIADDEPLARQRIQRLLEALPDYRVCGEAVDGNDTLRKVAELEPDILLLDIRMPGMDG 67 Query: 63 LEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 +E L + P ++F TA+D YAI+AFE A YLLKP+ L LAR + Sbjct: 68 MEAADQLSKLHNPPAVIFCTAYDHYAIQAFEVRAVAYLLKPVRREALADALARAGKLNRV 127 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 Q +L + H L+ + D+ + + V + G+ + TL+ Sbjct: 128 QRQALAQSTDAGNDQLAVRTHRGTELIDLSDLYYCEADQKYVTLHHRHGET-VCDYTLKE 186 Query: 182 LESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT-VPVSRRYLKSLKEAI 237 LE P LLR HR LV + +Q +R +GQ +L L+ T +PVSRR+ ++++ + Sbjct: 187 LEQAYPDHLLRVHRHTLVGVRFIQGLRRSSDGQNQLALKGNATLLPVSRRHASTVRQWL 245 >UniRef50_Q2S5X7 Alginate biosynthesis regulatory protein n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S5X7_SALRD Length = 252 Score = 258 bits (661), Expect = 9e-68, Method: Composition-based stats. Identities = 95/250 (38%), Positives = 138/250 (55%), Gaps = 14/250 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 ++ L+VDDEPLARE LR L E D+E+V E E + +H P V+FLD+QMP + Sbjct: 3 MRCLVVDDEPLARERLRALLDEADEDVEVVAEAEGGKEAVSLIHDREPSVVFLDVQMPVL 62 Query: 61 SGLEMVGMLDPE-HRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 G ++V +L RP+IVF+TA+DEYAI+AFE A DYL KP+ RL KTL R++ Sbjct: 63 GGFDVVDLLPEPGQRPHIVFVTAYDEYAIQAFEARALDYLTKPVRLERLNKTLGRVQDAL 122 Query: 120 SKQDVSLLPE--------NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGK 171 + D QALK + R+ ++ +++V ++ + V+ + G+ Sbjct: 123 ANDDAREQENLDDLRDSRQDQALKRLTVHVGHRLRVVPLEEVRWIEADEGFVFAHTEGGR 182 Query: 172 EGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRR 228 T+ TL LESR P +R HR +VNL E+ E G A L L++G V V+RR Sbjct: 183 -YRTDFTLEELESRLPPTRFVRVHRSTIVNLDAAYELVPEPAGTATLRLQDGTEVKVARR 241 Query: 229 YLKSLKEAIG 238 ++ AIG Sbjct: 242 RTDDVRSAIG 251 >UniRef50_C7R6S4 Two component transcriptional regulator, LytTR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6S4_KANKD Length = 234 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 80/240 (33%), Positives = 131/240 (54%), Gaps = 14/240 (5%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI VLIVDDE AR+ LR L SD+EIVGE N + + ++ L+PD++FLDI MP + Sbjct: 1 MISVLIVDDEQPARQRLRRLLDSHSDLEIVGEAENGQQALDLINSLQPDLIFLDISMPVM 60 Query: 61 SGLEMVGMLDPEHR-PYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +G+++ L+ P+I+F TA+DEYA++AF+ A DYLLKPI RL K L +L+++ Sbjct: 61 NGMQVAKQLNQNDPQPHIIFTTAYDEYALQAFDVDAQDYLLKPIRHERLSKALQKLQRQL 120 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 ++ + ++ + + ++++ F+ S V + + + +L Sbjct: 121 TQTKTA----------YLSIRERETVRRVAVEEILFLHSDQKYTEVHLAK-EVLLSSESL 169 Query: 180 RTLESRT--PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 + LE R +R HR LVN HL I +D+G LI +SRR+ +++ + Sbjct: 170 KDLEQRFSHDFIRIHRSTLVNRQHLIGIEQDDSGCLALIQDAKTKPEISRRHQPDVRQFL 229 >UniRef50_C7MLP3 Response regulator of the LytR/AlgR family n=8 Tax=Coriobacteriaceae RepID=C7MLP3_CRYCD Length = 238 Score = 257 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 88/243 (36%), Positives = 135/243 (55%), Gaps = 12/243 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K +IVDDE AR L+ L E E+V E ++ E I + + DV+FLDI MP S Sbjct: 3 LKAIIVDDEAPARSELKFLLDELGQTEVVAEAASVREAIEKLKEYPCDVMFLDINMPEAS 62 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GL++ L ++ P +VF+TA+ E+AI+AF+ +A DYL+KP++ RL + LAR+R+ S Sbjct: 63 GLQLAEALQHLKYPPAVVFVTAYSEFAIEAFKVNAIDYLVKPVESERLSQALARVREHVS 122 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 L Q L+ IP + L+ + + +V +R Y+ + + F+ ++L Sbjct: 123 ------LHAKVQKLERIPVEKGGKKILIGIDTIRYVMARDDYTYLQT-DNDRYFSTVSLA 175 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKSLKEA 236 LE R R HR YLVNL+ + E+ G L L + VPVSRR + SLK+A Sbjct: 176 QLEKRLDGHGFFRVHRGYLVNLSLVCEVEPVSGGTLLLTLDSCEDKVPVSRRRVSSLKKA 235 Query: 237 IGL 239 +G+ Sbjct: 236 LGI 238 >UniRef50_Q1D286 DNA-binding response regulator n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D286_MYXXD Length = 256 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 76/250 (30%), Positives = 121/250 (48%), Gaps = 15/250 (6%) Query: 4 VLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGL 63 VL+ DDE AR ++ L E + + GE ++ + + V LRPD+L LD+QMP ++G Sbjct: 6 VLVADDEAPARAKVKRLLAEDARFALAGEATDGPQTLRQVGTLRPDLLVLDVQMPGLTGF 65 Query: 64 EMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSKQD 123 E++ L PEH P ++F TA+D +A+ AFE A DYLLKP D R + L + Sbjct: 66 EVLEALGPEHCPAVIFSTAYDAFALAAFEAQAVDYLLKPYDAERFGRALDKAHAVLRSGM 125 Query: 124 VSLLPEN-----------QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 + L+ + L + DV +S+ V + + +G E Sbjct: 126 PDTARIQSLLAELGRAPAGRPLERLVVKVGEAWVPLPLADVWHLSAEDKYVRLYTGQG-E 184 Query: 173 GFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRY 229 TLR LE R +R HR +VNL + + +G L+L++G +V +SR + Sbjct: 185 HLVRQTLRALEERLDPSRFVRVHRGDIVNLDAVARLEPWSHGDGILVLKDGSSVVLSRTW 244 Query: 230 LKSLKEAIGL 239 ++ + GL Sbjct: 245 REAFLQKWGL 254 >UniRef50_D0XXI4 Two component transcriptional regulator, LytTR family n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XXI4_9CAUL Length = 262 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 76/246 (30%), Positives = 133/246 (54%), Gaps = 9/246 (3%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MIK LIVDDEPLAR ++ L+ +SD E+VGE ++ I + +PDV+FLD+QMP + Sbjct: 1 MIKTLIVDDEPLARRHIAALLRARSDFEVVGEAAHGASAIAQIEAAKPDVVFLDVQMPEV 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G ++V + E P VF+TA D +A++AFE A DYLLKP + R + L R+R+ + Sbjct: 61 TGFDVVEAIGVEAMPMTVFVTAHDAFAVRAFEVQAIDYLLKPFGDDRFAQVLDRVRRRLA 120 Query: 121 -----KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFT 175 ++ L + + G+ ++ ++DV ++ + + V + + Sbjct: 121 AGHGGADALATLLASAPRTPRLVARGNGVARIIPLEDVQWIGAAGNYAEVHTA-SRSLLI 179 Query: 176 ELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKS 232 + ++ +L +R P R HR +V L + E+R +G L +G + +SRRY ++ Sbjct: 180 DESIASLAARLPAQDFARIHRAVIVRLDAIAEVRGGSHGDGAARLTSGAELRISRRYREA 239 Query: 233 LKEAIG 238 ++ + Sbjct: 240 VQTYLS 245 >UniRef50_A1HLU8 Response regulator receiver protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HLU8_9FIRM Length = 249 Score = 256 bits (655), Expect = 5e-67, Method: Composition-based stats. Identities = 84/245 (34%), Positives = 137/245 (55%), Gaps = 9/245 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +KVLIVDDE + L+ L+EQ E+VG C N + + V ++PD +FLD++MP +S Sbjct: 3 LKVLIVDDEEIMCRELKYLLEEQGAAEVVGVCYNGEDALAMVGSVKPDAVFLDVRMPGLS 62 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GLE+ L + P++VF+TAF E+A++AFE +A Y+LKP DE +EK + RL + R Sbjct: 63 GLEVARRLSSLKDPPHVVFITAFSEFAVEAFEVNALHYILKPFDEQDIEKVIERLMRRRH 122 Query: 121 KQ---DVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL 177 + +LP+ Q L+ + G R+ ++ ++ + + ++ VY+ + +G + + Sbjct: 123 AASGVEPEMLPKAPQHLRKLCVEGRDRLEVIDVERIQVIFAKNRMVYIQTVDGTKYAAKH 182 Query: 178 TLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL--TVPVSRRYLKS 232 TL+ E RCHR Y+VN+ ++++ + L L VPV R Y K Sbjct: 183 TLQEYEEILDSRQFFRCHRNYIVNVDRIKQLATWFHRGYMLTLEGKEEVEVPVGRIYAKK 242 Query: 233 LKEAI 237 LKE I Sbjct: 243 LKEYI 247 >UniRef50_B1ZZB5 Two component transcriptional regulator, LytTR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZZB5_OPITP Length = 268 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 78/262 (29%), Positives = 127/262 (48%), Gaps = 27/262 (10%) Query: 3 KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 +VLIVDDEPLAR +R +L ++ EIVGEC N V + + + R DVLFLD+QMP + G Sbjct: 4 RVLIVDDEPLARSVIRHWLADKRGAEIVGECGNGVAALELLRQQRVDVLFLDVQMPEMDG 63 Query: 63 LEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK- 121 ++ P ++F+TA+D+YA++AF HA DYLLKP D+ R + R R + Sbjct: 64 FALLRRARAIEIPVVIFVTAYDKYALQAFAAHALDYLLKPFDKERFDHAFKRARLALEQV 123 Query: 122 ----------------------QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSR 159 ++ + +I L++ DV ++ + Sbjct: 124 RAAGEYRTRVRALLDTLELPVGEEARAQDRQLVFSSRLALRQDGKIVLVRTSDVHWLEAE 183 Query: 160 MSGVYVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELI 216 V + + E + TL L ++ +R HR +VN+ ++E+ NG+ E++ Sbjct: 184 GDYVRIHTRE-RRHLLHDTLSHLATQLDPRLFVRVHRSAVVNVECIRELEPSSNGEFEIV 242 Query: 217 LRNGLTVPVSRRYLKSLKEAIG 238 L +G + SR + L A+G Sbjct: 243 LVDGRRLHSSRTHRDDLLAALG 264 >UniRef50_B1I1G2 Response regulator receiver protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I1G2_DESAP Length = 249 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 83/244 (34%), Positives = 132/244 (54%), Gaps = 14/244 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ LIVDDE ARE LR L ++++GE ++A E + + + DV+FLDI+MP IS Sbjct: 3 LRTLIVDDEYPAREELRYLLGRCGSVQVIGEAADAQEALKLIKAVAYDVIFLDIRMPGIS 62 Query: 62 GLEMVGMLD-PEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+ + L ++ P +VF+TA++EYA+ AF A DYL+KP+ E RL + +ARL++ Sbjct: 63 GIGLARELRTQKNAPVVVFVTAYEEYALDAFGVGAVDYLIKPVTEKRLSEVIARLKERFR 122 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 PE + + T I + +++ + + V V + G+ TL Sbjct: 123 -------PEKDKPFAAVAITRRGNIVPVPTQEITHIYAESDRVIVCTA-GERASAPYTLE 174 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN--GLTVPVSRRYLKSLKE 235 L R P R HR ++VNL ++EI+ + NG L + + VPVSR + +LKE Sbjct: 175 ELARRLPQDIFFRSHRSFIVNLKFIKEIKPDLNGTYVLQINDRQNSEVPVSRSRVSALKE 234 Query: 236 AIGL 239 +GL Sbjct: 235 RLGL 238 >UniRef50_Q1IKW2 Transcriptional regulator, LytR/AlgR family n=2 Tax=Acidobacteria RepID=Q1IKW2_ACIBL Length = 253 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 79/247 (31%), Positives = 132/247 (53%), Gaps = 14/247 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + +IVDDE LAR L L S+IE++ EC+N E + AV + +PD+LFLDIQMP++ Sbjct: 6 LTAVIVDDEELARAVLHEMLSHHSEIELIAECANGFEAVKAVTERKPDLLFLDIQMPKLD 65 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E++ ++ + IVF TA+D+YA+KAF+ HA DYLLKP R E LAR ++ + Sbjct: 66 GFEVLELIGSD--MAIVFATAYDQYALKAFDVHAVDYLLKPYGADRFEAALARAKERARE 123 Query: 122 QDVSLLPEN--------QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 + + + Q + + ++++ + FV ++ + + S G + Sbjct: 124 KKPTPVSAELRAAATAPGQYADRLVVRDGTNVHIIPTAKLDFVEAQDDYIALASK-GAKH 182 Query: 174 FTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYL 230 + T+ ++E+ LR HR Y+VNL + ++ IL++G +PVSR Sbjct: 183 LKQQTISSIETVLDPKQFLRIHRSYIVNLDRVAKVEPYGKDSRVAILQDGTKLPVSRSGY 242 Query: 231 KSLKEAI 237 L+E + Sbjct: 243 ARLREVL 249 >UniRef50_Q03GB5 Response regulator of the LytR/AlgR family n=7 Tax=Lactobacillaceae RepID=Q03GB5_PEDPA Length = 243 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 79/243 (32%), Positives = 130/243 (53%), Gaps = 6/243 (2%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K+LIVDDEPLAR L L+ ++ V E E + +PD++FLDI++ + Sbjct: 1 MKILIVDDEPLARSELDFLLRNNPLVDSVSEAEGVTEAKQKLMTDQPDLMFLDIRLDDGN 60 Query: 62 GLEMVGMLDPEH--RPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 G+ L E RPYIVF TA+D+YA+ AF+ +A DY+LKP ++ R+++TL R+ Sbjct: 61 GMSFAKFLKKEEKLRPYIVFATAYDQYALDAFDVNATDYILKPFEKDRIDETLKRV-DRI 119 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 K+ +L+ + + T R +++ D+ ++ ++ V + + ++ TL Sbjct: 120 LKKPEALVNSDMCKNPRLSVTVDERTIIIKKSDILYLEAQNGNVLIYTKNLPLISSKQTL 179 Query: 180 RTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEA 236 LE + LR HR +LVNL + E + N EL L NG + VSR Y+ K+ Sbjct: 180 INLEKQLDPEQFLRVHRSFLVNLDMILEFQPSFNHTYELTLINGTKITVSRSYVAKTKKV 239 Query: 237 IGL 239 +G+ Sbjct: 240 LGI 242 >UniRef50_C6XTW9 LytTr DNA-binding region n=3 Tax=Sphingobacteriales RepID=C6XTW9_PEDHD Length = 245 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 84/248 (33%), Positives = 142/248 (57%), Gaps = 12/248 (4%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI+ +++DDEPLAR+ ++ +L+ ++E+V ECS+ EGI A+ +PD +FLDIQMP+I Sbjct: 1 MIRTILIDDEPLARDVVKHYLKLFPEVEVVAECSDGFEGIKAIAHHQPDFIFLDIQMPKI 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SG EM+ ++ E P ++F TAFDEYAIKAFE +A DYLLKPI++ R E+ + +L Sbjct: 61 SGFEMLELV--EKHPAVIFTTAFDEYAIKAFEVNAVDYLLKPIEQNRFEQAMQKLPGRLH 118 Query: 121 KQDV------SLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF 174 D + + + + I ++ + D+ ++ + V +++ EG Sbjct: 119 NTDAVTKELLDVAALSPAQHNRVVVKKNGVIKIIAVSDIHYLEADDDYVKLSTAEG-IYH 177 Query: 175 TELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLK 231 T+ E +R HR Y++NLA + I L++ ++L++ + +PVS+ Sbjct: 178 KNKTMNFFERTLEPGQFIRIHRSYIINLAQVTRIELKEKDSYVVLLKSDIWLPVSKTGYV 237 Query: 232 SLKEAIGL 239 LK A+G+ Sbjct: 238 KLKAALGM 245 >UniRef50_C1F8Y7 Response regulators of cell autolysis n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F8Y7_ACIC5 Length = 274 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 78/272 (28%), Positives = 127/272 (46%), Gaps = 34/272 (12%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I +IVDDE LARE L+ L+ DI+I+ + +N +E + +H PD++FLD+QMP + Sbjct: 3 ITAVIVDDEQLAREELQYLLEGAGDIDILAQGTNGIEAVDLIHGHHPDLVFLDVQMPGLD 62 Query: 62 GLEMVGML----DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ 117 G ++ L + P I+F TAFD+YA++AF+ +A DYLLKP D R+ + + R R+ Sbjct: 63 GFAVLKKLLDSGSGQPLPQIIFATAFDQYAVRAFDVNAIDYLLKPFDRDRVLQAVERARK 122 Query: 118 ERSKQDVS-------------------------LLPENQQALKFIPCTGHSRIYLLQMKD 152 + + P +Q I +R+ L+ D Sbjct: 123 RLEENAPNGERPSGSQATPGTDPRLDTLLRLIEQGPAGRQPRGKIVIQAQNRLLLVDQSD 182 Query: 153 VAFVSSRMSGVYVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLED 209 + F S + V + + TL L + R HR Y+VN+ H++E+ Sbjct: 183 LCFASIDEGTITVATAAFEGQSRCRTLEELLEQLDPNLFWRAHRSYVVNINHIKEVVPWF 242 Query: 210 NGQAELILRNG--LTVPVSRRYLKSLKEAIGL 239 +L + + +PVSR + L+E L Sbjct: 243 KSSYQLRMGDRKHTEIPVSRAQTRRLRELFNL 274 >UniRef50_Q0HP79 Response regulator receiver protein n=20 Tax=Bacteria RepID=Q0HP79_SHESM Length = 243 Score = 254 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 77/244 (31%), Positives = 124/244 (50%), Gaps = 6/244 (2%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+K +IV+DE LARE L ++ S+I+IV + +E + DV+FLDIQ+P I Sbjct: 1 MLKAIIVEDEYLAREELEYLVKSHSEIDIVASFEDGLEAFKYLQDHEVDVVFLDIQIPSI 60 Query: 61 SGLEMVGMLDPE-HRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 GL + L H P++VF+TA E+A++AFE AFDY+LKP +E R+ L ++ Q Sbjct: 61 DGLLLAKNLHKSTHPPHVVFVTAHKEFAVEAFELEAFDYILKPYNEPRIISLLQKIEQVG 120 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 + A + + RI + + + + + YV + + ++T+ Sbjct: 121 RQAPKPQHEAASNASRTVNLVKGERIIVTPCEQIYYAEADEKLTYVYTRTDR-YVMQMTI 179 Query: 180 RTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKSLKE 235 SR P RCHR Y VN+ ++EI N + L + VPVSR +K+ ++ Sbjct: 180 SEFVSRLPAEGFFRCHRSYCVNINKIREIVPWFNSTYLIRLHDLSFEVPVSRSNIKAFRQ 239 Query: 236 AIGL 239 + L Sbjct: 240 LMRL 243 >UniRef50_Q814J1 Sensory transduction protein lytT n=81 Tax=Bacteria RepID=LYTT_BACCR Length = 246 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 83/247 (33%), Positives = 136/247 (55%), Gaps = 9/247 (3%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+KVL+VDDE LAR+ L+ L+ ++EI+GE + + + + RPD++FLDIQ+ Sbjct: 1 MLKVLVVDDEMLARDELKYLLERTKEVEIIGEADCVEDALEELMQSRPDIVFLDIQLSDD 60 Query: 61 SGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTL----ARL 115 +G E+ +L ++ P IVF TA+D+YA++AFE A DY+LKP DE R+ +TL + Sbjct: 61 NGFEIANILKKMKNPPAIVFATAYDQYALQAFEVDALDYILKPFDEERIVQTLKKYKKQK 120 Query: 116 RQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFT 175 + + + + + + I L+ ++D+ +V V V + + T Sbjct: 121 QSQIETKHEIKGTDVTVEMHKLALPIEESIVLVNIEDIVYVGLVDGKVTVKTMR-ETYVT 179 Query: 176 ELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKS 232 TL LE + P +R HR ++ N+ H+ EI+ N LI++ G VPVSR Y K Sbjct: 180 HDTLVILEKKLPQVSFMRVHRSFIANINHITEIQPWFNSTYNLIMKEGSKVPVSRTYAKE 239 Query: 233 LKEAIGL 239 LK+ + + Sbjct: 240 LKKLLRI 246 >UniRef50_B8FVL1 Two component transcriptional regulator, LytTR family n=8 Tax=Clostridia RepID=B8FVL1_DESHD Length = 268 Score = 252 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 82/267 (30%), Positives = 139/267 (52%), Gaps = 30/267 (11%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ L+VDDE AR+ LR LQ+ +D++++GE +NA+E + ++ L V+FLDI MP + Sbjct: 3 LRALLVDDESPARKELRYLLQDYTDLQVIGEAANAIEALELINNLEYSVVFLDIDMPGLK 62 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+++ L E P I+F+TA +E+A+ AF +A DYLLKPI+ RL++ + +L + Sbjct: 63 GIDLARQLKEKESSPAIIFITAHEEFAVDAFCVNALDYLLKPINPKRLDQAIKKLFIQHG 122 Query: 121 KQDVSLLP-----------------------ENQQALKFIPCTGHSRIYLLQMKDVAFVS 157 P + L+ IP + LL+ +++ ++ Sbjct: 123 AGTPPASPSLSEPDEPTTATDTPLPKQPPENSTIRPLEVIPVEQRGKTILLRPEEIVYIY 182 Query: 158 SRMSGVYVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAE 214 + V+ + + + T TLR LE+R R HR YLVN+ ++E+ NG Sbjct: 183 TDKDNVFAKT-QKESYLTRFTLRELEARLNPNLFFRTHRCYLVNIKRMRELIPYFNGTYS 241 Query: 215 LILRNGL--TVPVSRRYLKSLKEAIGL 239 +++ + VPVSR + LKE +GL Sbjct: 242 IVVDDHERSEVPVSRTQSRKLKEILGL 268 >UniRef50_C6W416 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W416_DYAFD Length = 257 Score = 252 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 84/251 (33%), Positives = 138/251 (54%), Gaps = 15/251 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + LI+DDE LAR+ +R F+Q IEI E +N E + + + RPDV+FLDIQMP + Sbjct: 3 YRCLIIDDEVLARDVIRTFVQHDHSIEITDEAANGSEAVVKILQHRPDVVFLDIQMPELD 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G ++ + P H+P++VF TAFD+YA++AFE +A DYLLKP DE R ++L RL++ S+ Sbjct: 63 GFAVLREVWPHHQPFVVFTTAFDQYALRAFEVNAIDYLLKPFDEIRFHQSLGRLKERLSQ 122 Query: 122 QDVSLLPE------------NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHE 169 + + E + L+ + ++YL++ D+ S+ + + V + + Sbjct: 123 KSQPRIEELVNNLLREQKDKEENYLQRLLVKEAGKMYLVKTDDITHFSADGNYISVYTLQ 182 Query: 170 GKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVS 226 K +L +LESR ++R R +VN+ + E+ NG+ + L G V + Sbjct: 183 KKVYTVYESLGSLESRLDPAVMIRVGRSNIVNMNFISELETYFNGEYIIHLSTGEKVKWT 242 Query: 227 RRYLKSLKEAI 237 R Y ++K I Sbjct: 243 RGYRDNIKAFI 253 >UniRef50_Q1ISZ6 Transcriptional regulator, LytR/AlgR family n=2 Tax=Acidobacteria RepID=Q1ISZ6_ACIBL Length = 262 Score = 252 bits (646), Expect = 6e-66, Method: Composition-based stats. Identities = 74/260 (28%), Positives = 126/260 (48%), Gaps = 22/260 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + +IVDDE LAR+ L LQ D++++ + N VEG+ + + PD++FLD+QMP + Sbjct: 3 LSAVIVDDEQLARDELAYLLQSIGDVDVIAQGKNGVEGVNLIKEHNPDLVFLDVQMPGLD 62 Query: 62 GLEMVGML--DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 G ++ L P ++F TAFD+YA+KAFE +A DY+LKP D+ R+ + + + ++ Sbjct: 63 GFGVIKKLLDRKVAMPQVIFATAFDQYAVKAFEVNAVDYVLKPYDKKRIAQAIDKAKKNL 122 Query: 120 SKQDVSLLP---------------ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVY 164 + + E + I + R++L+ KD+ F S + Sbjct: 123 ESAEPAPSNDQRIDALVKMLEQKTEQKAGQSKILLKANGRMFLVDQKDICFASIEDGVIT 182 Query: 165 VTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-- 219 V + + TL L R HR +LVN+ ++E+ ++ + + Sbjct: 183 VVAANMEGQSNCRTLEELLDSLDPGAFWRAHRSFLVNINRIKEVVPWFKSSYQIRMDDRK 242 Query: 220 GLTVPVSRRYLKSLKEAIGL 239 +PVSR K L+E GL Sbjct: 243 QTEIPVSRAQTKRLRELFGL 262 >UniRef50_Q1ILF8 Transcriptional regulator, LytR/AlgR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1ILF8_ACIBL Length = 258 Score = 252 bits (645), Expect = 6e-66, Method: Composition-based stats. Identities = 80/252 (31%), Positives = 132/252 (52%), Gaps = 18/252 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ LIVDDEPLAR + LQ +I+GEC N + + +L+PD++FLD+QMP++ Sbjct: 3 IRTLIVDDEPLARRRILSLLQPDPSFDILGECGNGKDAADKICELKPDLVFLDVQMPKLD 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ---- 117 G ++ + H P I+F+TAFD+YA+KAF+ HA DYLLKP + R + R + Sbjct: 63 GFGVLEAVATTHLPQIIFVTAFDQYAVKAFDAHAVDYLLKPFKQERFMDAVLRAKAQFQQ 122 Query: 118 ----------ERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTS 167 E + + +SLL + ++ L+ +V ++ + + + + S Sbjct: 123 AAAPVNGNAPEENNKLLSLLRHVNTDSDRLVVRSGGKVVFLRASEVEWIEAAANYIKLYS 182 Query: 168 HEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVP 224 + + + +LE P +R HR +VNL+ +QEI+ G+ +ILRNG +P Sbjct: 183 QQ-RVFTVREKISSLEEALPNGKFMRIHRSVIVNLSMVQEIQPCGGGEFVVILRNGRELP 241 Query: 225 VSRRYLKSLKEA 236 + R Y + E Sbjct: 242 LGRTYRSKIDEL 253 >UniRef50_C8P5Q7 Response regulator n=2 Tax=Lactobacillaceae RepID=C8P5Q7_9LACO Length = 245 Score = 252 bits (645), Expect = 7e-66, Method: Composition-based stats. Identities = 75/245 (30%), Positives = 129/245 (52%), Gaps = 9/245 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +KVLIVDDEPLA LR L +Q +++ V E + K PD++FLDI++ + Sbjct: 1 MKVLIVDDEPLALSELRFLLDKQPNVDQVVEADGVTAAKQQLAKEVPDMMFLDIRLEDGN 60 Query: 62 GLEMVGMLDPEHR-PYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+ L PYIVF TA+D+YA+ AFE A DY++KP ++ ++++ + R+++ Sbjct: 61 GMAFAKQLKERPDCPYIVFATAYDQYALDAFEAQAVDYVMKPFEQGQIDEAVNRVQKLLD 120 Query: 121 KQDVSL---LPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL 177 + + Q A + + R ++Q + ++ + V + +E + Sbjct: 121 RSARTPGGRQVSQQNANPRLSLSSDDRTLVVQKTAIYYIEAVKGKTKVVT--DREIISSQ 178 Query: 178 TLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLK 234 L+ L ++ L+ HR Y+VNL ++E++ N L L NG VPVSR Y+ ++K Sbjct: 179 ALKKLYAQLDPGQFLQVHRSYIVNLNQVREVQPSFNQTYVLTLENGAKVPVSRSYVAAVK 238 Query: 235 EAIGL 239 A+G+ Sbjct: 239 LALGI 243 >UniRef50_Q0A576 Response regulator receiver protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A576_ALHEH Length = 243 Score = 252 bits (645), Expect = 8e-66, Method: Composition-based stats. Identities = 80/239 (33%), Positives = 124/239 (51%), Gaps = 5/239 (2%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++VL+VDDEP AR L + + +V E + + A + +PD++ LDIQMP + Sbjct: 1 MRVLVVDDEPWARRRLAEMVDAEQGHRVVAEAGTGEQALAATREHQPDLILLDIQMPGMD 60 Query: 62 GLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GLE+ + E P ++F+TA E+A+ AFE A DYLLKP+ RL LAR Q Sbjct: 61 GLEVARRIARRERPPGVIFITAHPEHALAAFEAKASDYLLKPVRPDRLRAALARAGQVNR 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 Q L + C L+ + + + + V V H+ E E +L+ Sbjct: 121 AQLQG-LRRPHADPGMLRCRTTRGERLVPLDRIHSLRAEDKYV-VVGHDDGELLLEDSLK 178 Query: 181 TLESR--TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 LE R LR HR LV L LQ + + G+ +++L+ GL +PVSRR+L ++++A+ Sbjct: 179 ALEQRFADRFLRVHRSALVALDRLQALERDALGRHQVVLQGGLRLPVSRRHLPAVRDAL 237 >UniRef50_Q097A8 Response regulator of the LytR/AlgR family n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q097A8_STIAU Length = 259 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 72/257 (28%), Positives = 130/257 (50%), Gaps = 27/257 (10%) Query: 8 DDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGLEMVG 67 DDE +AR++L L ++ +VGEC++ + + A+ + DVLFLD++M + G +++ Sbjct: 2 DDERIARQSLLSLLAADPEVRVVGECASGPQAVEALRQHPVDVLFLDVEMAGMDGFQVLR 61 Query: 68 MLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSKQDVSLL 127 PE I+F+TA+D +A+KAFE HA DYLLKP D+ R + LAR ++ + L Sbjct: 62 QAGPELSAAIIFVTAYDTHALKAFEVHALDYLLKPFDDERFARVLARAKEHVRNGRIQTL 121 Query: 128 PEN-----------------------QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVY 164 + L+ + R+ + +++V ++ + + Sbjct: 122 ARQLAGLLGAAPPPPAAAPVTPPPEPPRYLERLVLKDVGRVAFVNVEEVDWLEAEDYYIQ 181 Query: 165 VTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL 221 V + G+ +LR LE++ +R HR +VN+ ++E+R +G+ +ILR+G Sbjct: 182 VHTA-GQTHLIRQSLRELETQLDPRRFVRIHRSTIVNVERVKELRPLFHGEYHVILRDGN 240 Query: 222 TVPVSRRYLKSLKEAIG 238 + +SR Y L +G Sbjct: 241 QLKLSRSYRARLDALLG 257 >UniRef50_Q8EDD7 Uncharacterized response regulatory protein SO_2823 n=18 Tax=Shewanella RepID=Y2823_SHEON Length = 236 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 123/239 (51%), Positives = 171/239 (71%), Gaps = 4/239 (1%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI LIVDDE ARE L L +++DIEI+G+CSNA+E + + K +P ++FLDIQMPRI Sbjct: 1 MITCLIVDDELFAREELADSLSQEADIEIIGQCSNAIEALQTITKEKPQLVFLDIQMPRI 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SG+E++ MLDP+ P IVF+TAFDE+A+KAF+ HAFDYLLKPID RL KTL R+R++ + Sbjct: 61 SGMELIAMLDPDTLPKIVFVTAFDEFAVKAFDNHAFDYLLKPIDADRLSKTLKRVRKDLT 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 Q V+L+ ++L+ +PC S++ ++ ++DV +V S +SG++V +GK T+LTL+ Sbjct: 121 PQAVNLIA--PRSLEHLPCYSGSKLKVIPIQDVEYVFSDLSGIHVACTKGKVH-TQLTLK 177 Query: 181 TLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL 239 LE +TPL+ CHRQYL++ + EI L D G L G VPVSRRYLKSLK+ G Sbjct: 178 VLEEKTPLVHCHRQYLISPKAIAEIELLDTGAEVTTLL-GDKVPVSRRYLKSLKQLFGF 235 >UniRef50_C0ZI44 Two-component response regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZI44_BREBN Length = 260 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 82/261 (31%), Positives = 135/261 (51%), Gaps = 23/261 (8%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+KV IVDDE ARE LR L++ S++ +VGE + E + AV + PD +FLDI + Sbjct: 1 MLKVFIVDDETPAREELRYLLEQFSEVSVVGEAGSGEEALEAVLQTEPDAVFLDIHLQDR 60 Query: 61 SGLEMVGMLDPE--HRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE 118 G+++ L + P I+F +A++ +A++AFE A DY++KP E RLEKT+ R+R+ Sbjct: 61 DGVDVGQELLESMVNPPVIIFASAYEFHAVRAFEAEAVDYIVKPFSEMRLEKTMNRVRKM 120 Query: 119 RSKQDVSLLPEN---------------QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGV 163 R K + +L +P + +I L+ ++ + + Sbjct: 121 RRKSEPALDASPLLEERLQSLLQNVLVDTQPHRVPVEKNGKIMLIDPNEIVYATLEGRYA 180 Query: 164 YVTSHEGKEGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN- 219 + + G++ T TL+ LESR R HR ++VNL+ E+ G L++++ Sbjct: 181 SIYTA-GEQYATTFTLQELESRLSRQQFFRTHRAFIVNLSKTAELVPWFKGSIHLVMQDQ 239 Query: 220 -GLTVPVSRRYLKSLKEAIGL 239 VPVSR +K LK+ +G Sbjct: 240 RKTEVPVSRNVVKELKKRLGF 260 >UniRef50_B5JL04 LytTr DNA-binding domain family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JL04_9BACT Length = 255 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 77/255 (30%), Positives = 127/255 (49%), Gaps = 19/255 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ LI+DDE LARE L ++ I G+ S+ + + L+PD+LFLDIQMP ++ Sbjct: 1 MRALIIDDESLARERLATLIEADGRATIAGQASDGASALKQIAALKPDLLFLDIQMPELT 60 Query: 62 GLEMVGML--DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 G+++ L ++ P I+F+TA+D +A+KAF+ HA DYLLKP D AR L + Sbjct: 61 GIDVATALHDSEQNLPLIIFVTAYDAFALKAFDLHATDYLLKPFDRARFTAALDKALAAH 120 Query: 120 SKQDVSLLPE-------------NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT 166 +++ S + + L + RI L+ + DV ++++ + V V Sbjct: 121 QQRESSDIQQRLSALISDFHPKKTDTYLDRLSIKTEGRILLVPIGDVDYIAAANNYVEVH 180 Query: 167 SHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTV 223 TL LE++ LR R +V + ++EI +G+ L L NG + Sbjct: 181 VG-SVTHLMRETLSQLEAQLDPKNFLRISRSSIVAIDRIREIHPLFHGEHTLHLANGQKL 239 Query: 224 PVSRRYLKSLKEAIG 238 +R Y +LK +G Sbjct: 240 TATRSYRDALKPLLG 254 >UniRef50_D2PNH6 Two component transcriptional regulator, LytTR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PNH6_9ACTO Length = 237 Score = 250 bits (639), Expect = 4e-65, Method: Composition-based stats. Identities = 76/242 (31%), Positives = 126/242 (52%), Gaps = 8/242 (3%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI+ LIVDDEP AR L L E D+E+V + + + + RPD +FLD+++P Sbjct: 1 MIRALIVDDEPPARARLERMLGEHPDVEVVAAVGDVPAAMRRLAQDRPDTVFLDVRLPGD 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G ++ +L RP +V TA+ ++A++AF+E A DYLLKP RL + LAR+R+ Sbjct: 61 DGFTLLELLGRSDRPAVVCTTAYADHAVRAFDERAVDYLLKPFSRERLAEALARVREHHR 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + P + IP G + I + ++ V V + + V V + + + TLR Sbjct: 121 ----PVRPAGPAPARRIPVPGPTGIGFVDVRRVESVRAERNYVRVHT-DDRRVLLRATLR 175 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 +E R P +R +R +V + + E++ +G+ L L +G V R + ++ A+ Sbjct: 176 EMEDRLPGQEFVRVNRSVIVRIDRVVELQPLPHGEVALRLASGDQVVSGRSHAAVVRAAL 235 Query: 238 GL 239 GL Sbjct: 236 GL 237 >UniRef50_A4J8Q7 Response regulator receiver protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J8Q7_DESRM Length = 236 Score = 249 bits (637), Expect = 5e-65, Method: Composition-based stats. Identities = 79/244 (32%), Positives = 132/244 (54%), Gaps = 14/244 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++V++VDDE AR+ L L++ +DIE+ E + + + K RPD +FLDI MP Sbjct: 1 MRVVVVDDEAPARDELIYLLKQHADIEVAAEAEDVQSALQVIRKERPDAVFLDISMPDGE 60 Query: 62 GLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+E+ L P +VF TA+D++A++AF +A DYLLKP E R+ +T+ +LR+ S Sbjct: 61 GMEVARQLDRWVEPPLVVFATAYDQHAVEAFTVNAVDYLLKPFSEERVAETIDKLRRLLS 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + + Q K I + I LL +++ F S + V + + + K TL+ Sbjct: 121 HK------KQNQLQKKIAVSDEDLIKLLNPEEIVFASRQGREVMIKTFD-KTYSVNYTLQ 173 Query: 181 TLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL--TVPVSRRYLKSLKE 235 LE+R P R H +LVN+ ++ I G +L++++ VPVSR +K ++ Sbjct: 174 ALENRLGDLPFFRPHYSFLVNIDKIERIEPGFQG-HQLVMQDEDSSRVPVSRNGMKEIRR 232 Query: 236 AIGL 239 +G+ Sbjct: 233 LLGI 236 >UniRef50_Q8DET1 Uncharacterized response regulatory protein VV1_0503 n=56 Tax=Gammaproteobacteria RepID=Y503_VIBVU Length = 242 Score = 249 bits (637), Expect = 7e-65, Method: Composition-based stats. Identities = 118/241 (48%), Positives = 174/241 (72%), Gaps = 3/241 (1%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+ L++DDEP ARE L L E DI+++G+ +NA+ G+ +++L+PDV+FLDIQMP++ Sbjct: 1 MLTALVIDDEPFAREELTDLLSETGDIDVIGDAANAIVGLKKINELKPDVVFLDIQMPQV 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G+E++GM+DP+ PY+VF+TA+D+YAI+AFE++AFDYLLKP+D RL KT+ RL + S Sbjct: 61 TGIELLGMMDPDTMPYVVFVTAYDQYAIQAFEDNAFDYLLKPVDPERLRKTVKRLSKAAS 120 Query: 121 KQDVSLLPEN--QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELT 178 +S + + L IPC GH+RI ++ + V S +SGV+V S + T+LT Sbjct: 121 HSALSQHIASLAPETLDQIPCIGHNRIVIMATESVECAYSDISGVHVRSA-SQTASTQLT 179 Query: 179 LRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIG 238 L+ LE +T L+RCHRQYL+++ + EI+L +NG AE+I + G VPVSRRYLK LKE +G Sbjct: 180 LKVLEEKTSLVRCHRQYLISIKAISEIKLLENGLAEIITKTGFEVPVSRRYLKLLKEMLG 239 Query: 239 L 239 L Sbjct: 240 L 240 >UniRef50_A8VV77 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VV77_9BACI Length = 249 Score = 249 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 76/245 (31%), Positives = 126/245 (51%), Gaps = 8/245 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ ++VDDEP +R+ L L + +E+V + E + + K PD +FLDI+M + Sbjct: 6 IRTVVVDDEPYSRDELMYLLSKTDGVEVVAAAGSHDEALERILKHEPDAVFLDIEMGEKN 65 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GLE+ G+L P IVF TA+ ++AI AF +A DY+LKP DE ++++ + R+ Sbjct: 66 GLELAGILTKLAKPPQIVFATAYPDFAITAFRLNALDYVLKPFDEGQVQEAVNRILSAIQ 125 Query: 121 KQDVSLLPE--NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELT 178 ++ + Q + I+ L + ++ + V S +G E T LT Sbjct: 126 QESKPPANDGITQGVCTKLAVHYDEVIHYLSPNAIDYIFREGNITKVVS-QGSEYETRLT 184 Query: 179 LRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKSLK 234 L+ L + R H+ YLVNL ++E+ NG +L L + +PVSR Y+K L+ Sbjct: 185 LKDLSEKLKDYSFFRTHKGYLVNLNRVEEMTPWFNGACQLKLEHVDTQIPVSRNYVKQLR 244 Query: 235 EAIGL 239 + + L Sbjct: 245 QELEL 249 >UniRef50_Q317D4 Transcriptional regulator, LytR/AlgR family n=9 Tax=Desulfovibrionales RepID=Q317D4_DESDG Length = 270 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 80/267 (29%), Positives = 136/267 (50%), Gaps = 29/267 (10%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ ++VDDEP AR+ + L +D+++ G +A + + + + +PD++FLDIQM + Sbjct: 3 IRCIVVDDEPPARDEMVYLLSRFADVQVAGTADSAEQALALIAQQKPDLVFLDIQMYGHN 62 Query: 62 GLEMVGM-LDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G +V LD P +VF TA+D+YAI+AF+E+A DYLLKPI+E RL K+L R+R+ + Sbjct: 63 GFYVVEQLLDYPEPPLVVFATAYDQYAIRAFDENAVDYLLKPIEEKRLAKSLDRVREALA 122 Query: 121 KQDVSLLPENQQA----------------------LKFIPCTGHSRIYLLQMKDVAFVSS 158 + Q L + RI LLQ +V F+ + Sbjct: 123 ARTEQEQDSRTQTAPPLHDDIRLGRLLEQMGRRTVLTRVAVERGGRIVLLQPDEVFFIQA 182 Query: 159 RMSGVYVTSHEGKEGFTELT-LRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAE 214 + ++ + EG +T L+ LE + R R L+N+ H++E +G+ Sbjct: 183 QGKRIWAHTTEGMAPCHGVTNLQKLEEKLAGHDFFRATRGELINMQHVREFSPWMHGKYN 242 Query: 215 LILRN--GLTVPVSRRYLKSLKEAIGL 239 +++ + + V+R +K KE +GL Sbjct: 243 IVMSDPGQTEITVNRSRVKDFKERLGL 269 >UniRef50_Q1YRG1 Response regulator n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRG1_9GAMM Length = 270 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 79/267 (29%), Positives = 131/267 (49%), Gaps = 32/267 (11%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K +IVDDEPLA + LR L + +EI+GECSN + I A L PD++FLDIQMP ++ Sbjct: 4 LKTIIVDDEPLALDLLRSILGDIEGVEIIGECSNGRDAIAAASSLHPDLIFLDIQMPGVN 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E+V + + P ++F TAF+++AI AF+ HA DY+LKP+D R+E+ + R + S Sbjct: 64 GFEVVKAMQSDAMPMVIFATAFNQFAIDAFDMHAVDYVLKPLDPERVERAVQRALERFSV 123 Query: 122 QDVSLLPE----------------------------NQQALKFIPCTGHSRIYLLQMKDV 153 QD + + + + + + ++ D+ Sbjct: 124 QDEDTVHKVPLIGAINEITKRLDKEPGASDSLAEELPEGIKRKLLIRDSGVVKVVPFDDI 183 Query: 154 AFVSSRMSGVYVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDN 210 +V + + V G+ TLR L + +R HR +VN+ + I Sbjct: 184 DWVDAAGDYMCVH-ALGETHIVRSTLRELLEKLDEKMFIRIHRSTVVNIERVASITRLQK 242 Query: 211 GQAELILRNGLTVPVSRRYLKSLKEAI 237 G + L L +G ++ VSR Y ++++ Sbjct: 243 GGSLLHLADGNSLRVSRNYREAIRTLF 269 >UniRef50_A5G4A4 Two component transcriptional regulator, LytTR family n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G4A4_GEOUR Length = 279 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 75/249 (30%), Positives = 121/249 (48%), Gaps = 18/249 (7%) Query: 3 KVLIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +IVDDEP L+ L +++I+ E +N + + + +L PDV FLDI+MP I Sbjct: 10 TAIIVDDEPHLCAFLKRQLTSCWPELDILAEANNGPDALRLIGELHPDVAFLDIRMPGID 69 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL++ ++VF+TA+D+YA++AFE A DYLLKP+ RL KT+ RL+ + S Sbjct: 70 GLDLAS--RVGTLCHVVFVTAYDQYAMQAFENAAVDYLLKPVALERLNKTVNRLKSQLSS 127 Query: 122 QDVSLLP----------ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGK 171 L P +Q L+++ + H+ I L+ + +V F + V + + Sbjct: 128 VPPDLSPLIAKLSEQIRPQKQYLQWLQVSSHNDIELIPVDEVEFFQASDKYTLVVTRNTE 187 Query: 172 EGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILR-NGLTVPVSR 227 +L+ LE R HR +V +A + I + G L L G T+ V R Sbjct: 188 RIM-RKSLKELEEELDPERFWRVHRNAIVRVAAIARISRDFRGHHVLHLHQGGRTLAVGR 246 Query: 228 RYLKSLKEA 236 Y ++ Sbjct: 247 NYSHLFRQM 255 >UniRef50_B8CWX9 Two component transcriptional regulator, LytTR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWX9_HALOH Length = 253 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 90/252 (35%), Positives = 131/252 (51%), Gaps = 15/252 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ L+VDDE AR L L+ V E N + + V+ DV+FLDIQMP ++ Sbjct: 3 MQALVVDDEAPARNELIFMLENSKVNFRVREADNGKKALELVNNHNFDVIFLDIQMPSLT 62 Query: 62 GLEMV-GMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GLE+ +L E +P IVF+TA+DEYAIKAFE +A DYLLKP R E+T+ R+ Sbjct: 63 GLEVAAEILKVEDKPEIVFVTAYDEYAIKAFELNAVDYLLKPFSRKRFEETINRVMSHSK 122 Query: 121 K-------QDVSLLPENQQALKFIPCTG-HSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 K + + + LK IP RI LL+ ++ + ++ V++TS EG Sbjct: 123 KDRIKDTIKINKAISQLTPELKRIPVNSKRGRIKLLKPSEIYYATTEGGKVFITSEEGVF 182 Query: 173 GFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN--GLTVPVSR 227 F L+ LE RCHR YLVNL+ ++E+ G LI+ + +PV R Sbjct: 183 EFANG-LKELEEMLNLPQFFRCHRSYLVNLSKVKELIPWFKGNYYLIINDESEEEIPVGR 241 Query: 228 RYLKSLKEAIGL 239 + LK+ + L Sbjct: 242 TRVNELKKKLNL 253 >UniRef50_A5VAK9 Two component transcriptional regulator, LytTR family n=10 Tax=Sphingomonadales RepID=A5VAK9_SPHWW Length = 266 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 79/260 (30%), Positives = 130/260 (50%), Gaps = 29/260 (11%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ ++VDDEPLA + LR+ L D+EI+ C N E I A+ +PD++FLDIQMP Sbjct: 3 IRTILVDDEPLAIQGLRLRLAAHEDVEIIETCLNGREAIRAIKTHKPDLVFLDIQMPGFD 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G ++ L P VF TA++++AI+AF+ A DYLLKP+DE RL TL R+RQ ++ Sbjct: 63 GFSVIQGLMEVEPPLFVFCTAYEDHAIRAFQAQALDYLLKPVDEQRLADTLDRVRQRLAE 122 Query: 122 Q-------------------------DVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFV 156 + + P + + K I +I+ + + + + Sbjct: 123 KKGVEEVGRLKEVLAEVAPDAADSYGESDDAPASNRFEKMINIKDRGQIFRVDVDTIERI 182 Query: 157 SSRMSGVYVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQA 213 + + + + + T++ LE R R HR +VNL +++++ NG+ Sbjct: 183 DAAGDYMCIYTGDN-TLILRETMKDLEKRLDPRRFQRVHRSTIVNLDLVRQVKPHTNGEC 241 Query: 214 ELILRNGLTVPVSRRYLKSL 233 L+L +G V VSR Y + + Sbjct: 242 FLVLDSGAQVKVSRSYREVV 261 >UniRef50_Q1QCQ5 Transcriptional regulator, LytR/AlgR family n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1QCQ5_PSYCK Length = 247 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 73/248 (29%), Positives = 133/248 (53%), Gaps = 11/248 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + V +V+DE LAR+ L L++ I +VGE + + + +++ +PD +FLDI++ + Sbjct: 1 MNVYVVEDEVLARQELIYLLKDTGKINVVGEADDIHQALWDINEKQPDAVFLDIELEGGN 60 Query: 62 GLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ--- 117 GLE+ + + P +VF+TA+DEYA+ AF+ A DY++KPID RL K + +L + Sbjct: 61 GLELAKQFSNMKKPPMVVFVTAYDEYALNAFKLDAIDYIVKPIDRGRLIKAVEKLIKLGS 120 Query: 118 ----ERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 E + + L + I RI ++ KD+ ++ + Y+ + E K+ Sbjct: 121 VPNSENLVKPLPLPSTHNDKKHSITVKQADRIIIINTKDILYIGTENRQAYIQTLE-KKY 179 Query: 174 FTELTLRTLESRT--PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLK 231 T+ L + + ++ HR Y+VN + + N +IL++G + VSR Y+K Sbjct: 180 PTDTLLYKMMDKLGDNFIQVHRGYIVNTKQIAALEPWFNRTYLIILKDGSKIAVSRSYVK 239 Query: 232 SLKEAIGL 239 ++K+ +GL Sbjct: 240 AVKQVLGL 247 >UniRef50_B7R6J5 LytTr DNA-binding domain family protein n=2 Tax=Thermoanaerobacteraceae RepID=B7R6J5_9THEO Length = 248 Score = 246 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 85/247 (34%), Positives = 134/247 (54%), Gaps = 18/247 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ LI++DE ARE L+ LQE DIE+VGE N + G+ + KL+PDV+FLDI +P+I Sbjct: 7 LRALIIEDEQPAREELKYLLQEYEDIEVVGEADNGITGLHLIEKLKPDVIFLDINIPKIH 66 Query: 62 GLEMVGMLDP----EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ 117 G E+ + P++VF+TA+D +AI AFE DYLLKPI RL KTL ++R Sbjct: 67 GCELARHISAVSEIGKPPFVVFVTAYDIHAIDAFEIGVVDYLLKPISHHRLYKTLEKIR- 125 Query: 118 ERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL 177 SL E + + + + RI LL ++++ F + V + + + + Sbjct: 126 -------SLYKETEIPIGKLAVEKNERIKLLDLEEIVFAEAHEGNVLINTKN-ETFIYKG 177 Query: 178 TLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT--VPVSRRYLKS 232 T+++LE + R + Y+VNL + EI G L++ + +PVS+ +K Sbjct: 178 TIKSLEEKLKDRGFFRVQKSYIVNLNKIAEILPWFKGTYWLVMEDNKKTQIPVSKSQIKE 237 Query: 233 LKEAIGL 239 LK +GL Sbjct: 238 LKALLGL 244 >UniRef50_Q482L9 LytTr DNA-binding response regulator n=9 Tax=Alteromonadales RepID=Q482L9_COLP3 Length = 280 Score = 246 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 78/277 (28%), Positives = 133/277 (48%), Gaps = 40/277 (14%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + +IVDDEPLAR+ L + L+ DI ++ +C N E + A+ + D++FLDIQMP ++ Sbjct: 3 LSTIIVDDEPLARKGLAIRLRAHDDINVIEQCCNGREALEAIRAYQVDLMFLDIQMPGLN 62 Query: 62 GLEMVGMLDPE--HRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 G +++ + + P +VF+TAFD+YA+KAFE HA DYLLKP DE RLE+T+ +++ Sbjct: 63 GFQVIESIIEQGLAMPVVVFVTAFDQYALKAFEVHALDYLLKPADEERLEQTIDKIQHYF 122 Query: 120 SKQDVSLLPEN----------------------------QQALKFIPCTGHSRIYLLQMK 151 + + + + +K Sbjct: 123 KSSADTAHKSKLVRLVSDVTGNDYQKILTELDNDQELTLSSYSDVLAIKDAGEVNRVSVK 182 Query: 152 DVAFVSSRMSGVYVTSHEGK-------EGFTELTLRTLESRTP---LLRCHRQYLVNLAH 201 D+ ++ + + V + E K T++ LE+ +R HR +VN Sbjct: 183 DILWIDAAGDYMCVHTLETKQNTRQENTYILRKTMKELEACLDPKQFIRNHRSTIVNKNI 242 Query: 202 LQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIG 238 + + + NG+ L+L+NG + VSR Y +K+A+ Sbjct: 243 IDKFCSQVNGEYFLVLKNGKELKVSRSYKDKVKQAVN 279 >UniRef50_UPI000178918B two component transcriptional regulator, LytTR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178918B Length = 264 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 79/258 (30%), Positives = 127/258 (49%), Gaps = 22/258 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IK +I +DE LARE L L+++ DIE++ +N E + V +PDV+FLD+ MP + Sbjct: 4 IKTMIAEDERLAREELAYLLEQEPDIELLPHAANGRELLELVPLRQPDVVFLDVHMPELE 63 Query: 62 GLEMVGMLDPEH-RPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GL+ ML P IVF TA+DEYA++AF +A DYLLKP RL++TL R+R Sbjct: 64 GLQAARMLKASPISPLIVFTTAYDEYAVEAFGLNAIDYLLKPYSHMRLKETLQRIRSRIQ 123 Query: 121 KQDVSLLPENQQALK----------------FIPCTGHSRIYLLQMKDVAFVSSRMSGVY 164 + + E A++ + + L+ + + + + Sbjct: 124 EGNAFPKQEAHDAIQAAPYPSTEAAARSMRGKLLFDDGDKHVLVDPEAILYAVREERVIR 183 Query: 165 VTSHEGKEGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL 221 V + EG+ ++ TL+ LE + R HR YLVN+ + E+ NG ++L+ Sbjct: 184 VWTAEGQRITSKSTLQELEEKLAGYSFFRPHRSYLVNVNWIAELSPWQNGAYNIVLKGEQ 243 Query: 222 T--VPVSRRYLKSLKEAI 237 +P+SR + L + Sbjct: 244 RSMIPLSREAARDLFRLL 261 >UniRef50_A4AS29 Two-component system, regulatory protein n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4AS29_9FLAO Length = 240 Score = 246 bits (628), Expect = 6e-64, Method: Composition-based stats. Identities = 78/238 (32%), Positives = 127/238 (53%), Gaps = 7/238 (2%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 K +I+DDE LARE ++ L++ + EI+GE S+ E I A+ +L PD+LFLDI MP S Sbjct: 4 YKTIIIDDERLAREEVKRALEKHQEFEIIGEASHVDEAIAAIEELEPDILFLDIHMPGKS 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G +++ L P +VF TA+D+YA+KAFE +A DYL+KP+ + R KT+ +++ E SK Sbjct: 64 GFDLLEELTK--VPNVVFTTAYDQYAVKAFEMNALDYLVKPLRDERFSKTIEKVKTELSK 121 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 + S P + I + + + D+ F+ S + + K + +L Sbjct: 122 RVTSE-PRTLSMHQKIFIKDGENCHFIPLSDIHFIESLDNYARLYFGLDKA-MIKRSLNL 179 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEA 236 L + R +R ++N+ +++EI N + ++IL G V VS R K Sbjct: 180 LAEKLDPKVFFRVNRSQIINIHYIKEIHPYFNNKLQIILTTGEKVEVSSRQSVKFKNW 237 >UniRef50_B3E2Y5 Two component transcriptional regulator, LytTR family n=1 Tax=Geobacter lovleyi SZ RepID=B3E2Y5_GEOLS Length = 251 Score = 245 bits (627), Expect = 8e-64, Method: Composition-based stats. Identities = 78/246 (31%), Positives = 133/246 (54%), Gaps = 11/246 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I V ++DDE AR LR L++ ++EIVGE + A EG+ + +L+P +LFLDIQMP ++ Sbjct: 3 ITVFLIDDEAPARRELRYLLEQLPELEIVGEAATATEGLRLLRQLKPRLLFLDIQMPGLT 62 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+E+ +L RP +VF TA+ ++A+ AF AFDYLLKP+ RL KT+ ++R++ + Sbjct: 63 GIELSQILQELPERPLVVFSTAYSQFAVDAFNLEAFDYLLKPVTLERLGKTIDKVRKQLA 122 Query: 121 K----QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTE 176 + L K++ S+I + + + FV + ++ + + T Sbjct: 123 ATPPGPERPLPEPPHDDRKWVAARQGSKILPIAPESIVFVRCTEAVTHIHTAT-RIYQTS 181 Query: 177 LTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG--LTVPVSRRYLK 231 T+ L+ + R HR LVNL + EI +G +L++ + + VSR + + Sbjct: 182 HTITALQEQLEPYAFFRAHRNSLVNLNCILEIIPWFSGSCKLVMNDPARTEILVSRYHAR 241 Query: 232 SLKEAI 237 LK+ + Sbjct: 242 DLKKHL 247 >UniRef50_Q21E91 LytTr DNA-binding region n=2 Tax=Saccharophagus degradans 2-40 RepID=Q21E91_SACD2 Length = 249 Score = 245 bits (627), Expect = 9e-64, Method: Composition-based stats. Identities = 81/252 (32%), Positives = 133/252 (52%), Gaps = 17/252 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K +V+D LAR+ L L E +++ +VG+ A E I ++KLRP ++F+DI MP Sbjct: 1 MKAYVVEDSRLARKELTDLLAEHTELNLVGDSGRADEAIEQINKLRPQLVFMDINMPGKD 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G +++ L ++ P I+F+TA+ +YAIK+F+ DYLLKPI RL+K L +L++E ++ Sbjct: 61 GFQVLEAL--DYSPRIIFVTAYADYAIKSFDYDTVDYLLKPISAERLQKALDKLQREPTQ 118 Query: 122 QDVSLLPENQ-----------QALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEG 170 Q N + I + +L+++ + S + V + Sbjct: 119 QADREAEPNYTDTPVDTTAQLEEKSRIFIKDGDQCHLVELAKIIRFESCGNYTQVYF-DS 177 Query: 171 KEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSR 227 K+ F L +E R P R RQ++VNL + +I+ NG +L L+NG + VSR Sbjct: 178 KKAFVYRALSKIEERLPDLTFFRASRQHIVNLEFVTDIQPWVNGGYQLTLKNGEQIAVSR 237 Query: 228 RYLKSLKEAIGL 239 R+ LKE + L Sbjct: 238 RHATRLKEILSL 249 >UniRef50_C5RQ54 Two component transcriptional regulator, LytTR family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RQ54_CLOCL Length = 253 Score = 245 bits (627), Expect = 9e-64, Method: Composition-based stats. Identities = 85/253 (33%), Positives = 136/253 (53%), Gaps = 15/253 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++V++VDDE + NL+ +L ++ DIEI+G +++E I + +PD +FLDI MP I Sbjct: 1 MRVILVDDELASLNNLKYYLSKEEDIEIIGMYQDSLEAIKKIITDKPDAVFLDISMPEID 60 Query: 62 GLE-MVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL----- 115 GL +L + IVF+TA+D+YAIKAFE A DY+LKPID R++ T+ RL Sbjct: 61 GLSCAAEILSHDEEMKIVFVTAYDDYAIKAFELSAIDYILKPIDPQRIKATIKRLSKFSV 120 Query: 116 ----RQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGK 171 +++ K + + +P + RI+L ++D++F+ S V + + +GK Sbjct: 121 DQTTKEKFKKNQFIKEKAMKTNISKLPLWENDRIFLCDIEDISFIFSECGYVKINTCKGK 180 Query: 172 EGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG--LTVPVS 226 ++ TL E R RCH+ ++VN + EI N +LI+ + VS Sbjct: 181 TYTSKETLNYYEDRLNELSFFRCHKSFIVNTKKIAEIIPWFNSTFKLIMDGDSNSDITVS 240 Query: 227 RRYLKSLKEAIGL 239 R Y+ S K GL Sbjct: 241 RSYMTSFKSLFGL 253 >UniRef50_B1ZXP5 Two component transcriptional regulator, LytTR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZXP5_OPITP Length = 242 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 68/239 (28%), Positives = 109/239 (45%), Gaps = 7/239 (2%) Query: 3 KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 + LIVDDE LAR L L + +IE+ E + E A+ +LRP++LFLDIQMP SG Sbjct: 5 RALIVDDERLARRELAYLLADHPEIEVAAEAGSVGEAAAALERLRPELLFLDIQMPGESG 64 Query: 63 LEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSKQ 122 ++ R ++F+TA D++A++AFE +A DYL+KP++ ARL + R Sbjct: 65 FDLFERARVTAR--VIFVTAHDQFALRAFEVNALDYLMKPVNPARLRVAVDRFLGR-GAP 121 Query: 123 DVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRTL 182 + T + + +A + + + S G G ++ Sbjct: 122 PPGPSAGRINYDDSVFVTIDQAPRFIAVASIACILAEGDYTRLISTTGPIGLVLKPMKEW 181 Query: 183 ESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKSLKEAI 237 E P R R +VN AH+ NG ++ L+ + +SRRY + + Sbjct: 182 EQLLPERHFARIQRSAIVNCAHVARFEPWFNGAMQVHLKALPEPLTMSRRYARQFRAKF 240 >UniRef50_C9RRP4 Two component transcriptional regulator, LytTR family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RRP4_FIBSS Length = 254 Score = 244 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 87/255 (34%), Positives = 139/255 (54%), Gaps = 20/255 (7%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQS-DIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 M LI DDEPLAR +R L+ S +IEI+GE S+ + I +H+L PD++FLDIQMP Sbjct: 1 MFTALIADDEPLARVRMRSLLEAYSSEIEILGEASSGAQTIQKIHELDPDIVFLDIQMPD 60 Query: 60 ISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 + E++ L+ + P IVF TA+D +A++A+EE+ DYLLKPID RL+ T+ +LR+ Sbjct: 61 MDAFEVLKSLNEDDIPLIVFTTAYDNFALRAYEENVVDYLLKPIDPERLQATMGKLRKRM 120 Query: 120 SKQD-------------VSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT 166 ++ L+ + ++ + RI L+ M +V S Sbjct: 121 PHEEGLGVPADFSWDKFKELMSSSGLYMQRLQVKQSDRILLVNMDEVIRFQSEEKYTTAY 180 Query: 167 SHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELIL--RNGL 221 + + +LTL LE+R +R HR +LV + ++ EIR D G+ ++L +N Sbjct: 181 TTTSQ-YIIDLTLVKLETRLDPRQFVRVHRAHLVAIDYIAEIRKNDAGRLCIVLRDKNRT 239 Query: 222 TVPVSRRYLKSLKEA 236 + VSR ++K++K Sbjct: 240 QITVSRNFVKTVKSL 254 >UniRef50_C1P760 Two component transcriptional regulator, LytTR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1P760_BACCO Length = 238 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 74/243 (30%), Positives = 130/243 (53%), Gaps = 9/243 (3%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+K +VDDE AR+ L L++ +E+ GE + E + + + D++F+D+ + Sbjct: 1 MLKAFVVDDEAPARDELIYLLKKTGQVELAGEAGSVKEALAKLKETEADIVFVDMMLTNE 60 Query: 61 SGLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 G+++V + P +VF TA+DEYA+KAFE +A DY+LKP +E R+ +T+A++++ Sbjct: 61 HGIDLVKEISRHPQHPAVVFATAYDEYAVKAFELNAADYILKPFEEKRVAQTVAKVKKML 120 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 P + + T RI ++ ++ + + S + + + K+ +L Sbjct: 121 EGDR----PAVPKNPGKLAVTTDERIVIIPVEKLLYAESVDGRTVIAT-DDKKYTITESL 175 Query: 180 RTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEA 236 +E + P + R HR YLVNL + EIR + LI+R+G +PVSR Y LK+ Sbjct: 176 VNVEKKLPSTSIARVHRAYLVNLDGIVEIRPWFHSTYNLIMRDGAKIPVSRTYKHVLKQF 235 Query: 237 IGL 239 I + Sbjct: 236 IRI 238 >UniRef50_Q023F4 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q023F4_SOLUE Length = 251 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%) Query: 3 KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 ++LIVDDEPL R +R L + DIE+ GEC + E + + D++ LD+++P G Sbjct: 5 RLLIVDDEPLIRAGIRDGLSGRDDIEVAGECGSVSEAVDLLRSDEVDLVLLDVELPDGKG 64 Query: 63 LEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSKQ 122 +++ + P +VF+TA+D+YAI+AFE +A DYLLKP D++RL +L R+R + Sbjct: 65 FDVIRRVGTYRMPAVVFVTAYDKYAIQAFEVNAVDYLLKPFDQSRLLASLDRVRDRLAGA 124 Query: 123 DVSLLPENQ--------QALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF 174 SL + Q + + R L+ + V ++ + + + + Sbjct: 125 GESLARRLEALIQSRETQWPQTLVVRQGERYDLISVTSVDWIEAANNYAVLHCGT-VDHV 183 Query: 175 TELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLK 231 TL +LE+R LR HR +VN A + + G EL LR G V R+Y Sbjct: 184 FGETLASLETRLDPAKFLRVHRSVIVNSARIVAVHTMIGGVYELELRGGTRVKTGRQYRD 243 Query: 232 SLKEAIG 238 +++ +G Sbjct: 244 RIRKLLG 250 >UniRef50_Q2SQ69 Alginate biosynthesis regulatory protein AlgR-like protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQ69_HAHCH Length = 246 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 81/244 (33%), Positives = 125/244 (51%), Gaps = 9/244 (3%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M KV+IVDDEPLARE L+ L + E+ E S E + + PD++ LDI+MP Sbjct: 1 MTKVIIVDDEPLARERLKRLLLDT-HYEVCAEASGGDEALERIRLHSPDIVLLDIRMPGK 59 Query: 61 SGLEMVGMLDPEH-RPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 GLE+ L P ++F TA+DEYAI+AF A DYLLKPI L + L + Q Sbjct: 60 DGLEVAAELAQHPQPPAVIFTTAYDEYAIQAFRVRAQDYLLKPIRREDLMRALQNVTQVN 119 Query: 120 SKQDVSLLPE---NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTE 176 Q SL E +A + C + +++ D+ ++ + V V +G+ ++ Sbjct: 120 RAQLQSLKQEINGQDEAPAVVVCRSSRGMERIKISDILYLQAEHKYVTVFHAQGET-LSD 178 Query: 177 LTLRTLESRT--PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKSL 233 L+ LE LR HR L+N +++ ++ +G E+ LR +PVSRR + + Sbjct: 179 QPLKELEQALHPHFLRIHRNTLINRHYIEILQRRHDGHYEVRLRGVREALPVSRRLVTEV 238 Query: 234 KEAI 237 K+ + Sbjct: 239 KQFL 242 >UniRef50_C3JDP1 Response regulator, two-component system n=4 Tax=Actinomycetales RepID=C3JDP1_RHOER Length = 263 Score = 244 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 79/244 (32%), Positives = 119/244 (48%), Gaps = 9/244 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + VL VDDE A + L L+ + + V S+A + + D +FLDI MP + Sbjct: 10 LTVLAVDDEKPALDELAFLLRAEDSVAHVHTASDATTALRILRGGSIDAVFLDINMPGLD 69 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GLE+ G+L P +VF+TA D+ A+ AF+ A DYLLKP+ E RL + + R+ Sbjct: 70 GLELAGILSNFATPPPVVFVTAHDDRAVDAFDLGAVDYLLKPLREERLAQAVQRIVGLAG 129 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + PE + IP L+Q V +V + + + GK + + Sbjct: 130 RTKSESKPEAAPTDEVIPVELGGVTTLVQRSSVEWVEADGDYARLHTA-GKSHLVRIPIS 188 Query: 181 TLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL----TVPVSRRYLKSL 233 TLESR LR HR YLV+LA + IR +G + +G +PVSRR+ + L Sbjct: 189 TLESRWADAGFLRVHRSYLVSLALVTGIRTVGSGLVVCLRPHGDKPPVELPVSRRHTREL 248 Query: 234 KEAI 237 K+ + Sbjct: 249 KDRL 252 >UniRef50_B5YGI8 Sensory transduction protein LytT n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YGI8_THEYD Length = 257 Score = 243 bits (622), Expect = 4e-63, Method: Composition-based stats. Identities = 85/254 (33%), Positives = 134/254 (52%), Gaps = 16/254 (6%) Query: 1 MI-KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 M+ ++VDDEP ARE L L +I+GE +A + I K++ DV+FLDI+MP Sbjct: 1 MLFSAIVVDDEPYAREELIYILSHFPTCQIIGEAGSAKDCIFLYSKVKSDVVFLDIEMPD 60 Query: 60 ISGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE 118 +SGLE+ ML P IVF TA+D+YAI+AFE A DY+LKP +E R+ KT+ R+ Sbjct: 61 MSGLEIANMLSTFNEPPLIVFATAYDDYAIEAFELGAIDYILKPFEEKRIAKTIMRIENL 120 Query: 119 RSKQ--------DVSLLPENQQALKFIPCTGH-SRIYLLQMKDVAFVSSRMSGVYVTSHE 169 ++ Q +S ++ K +P I + D+ + + GV + + + Sbjct: 121 KNNQTEWNNAVNKLSQFLGKKKVFKKLPVQQKAGVISFIPYVDILYCEAYEGGVKIFTLK 180 Query: 170 GKEGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL-TVPV 225 + F + TL LE R +R H+ Y+VNL ++ + G L++ +PV Sbjct: 181 DEYYF-DGTLSELEMRLKEEGFMRVHKSYIVNLKRIEAVLPWFKGTYWLVIEGKKIQLPV 239 Query: 226 SRRYLKSLKEAIGL 239 S+ +K LKE +G+ Sbjct: 240 SKSIIKELKEVLGI 253 >UniRef50_C2D9N2 Two-component response regulator n=3 Tax=Coriobacteriaceae RepID=C2D9N2_9ACTN Length = 247 Score = 243 bits (622), Expect = 4e-63, Method: Composition-based stats. Identities = 73/250 (29%), Positives = 132/250 (52%), Gaps = 18/250 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAV------HKLRPDVLFLDI 55 I LIVDDE AR L+ L++ + + E S+A + A+ + +V+FLDI Sbjct: 4 INALIVDDEAPARSELKYLLEQTGRVARIEEASSARSAVEALVRSKEGAEQATNVIFLDI 63 Query: 56 QMPRISGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLAR 114 MP++SG+++ L + P +VF+TA+ EYA++AF+ A DYL+KP++ RL + L + Sbjct: 64 SMPKMSGMQLAEALHKLNNPPVVVFVTAYSEYALEAFDVDAIDYLMKPVEMDRLLRALDK 123 Query: 115 LRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF 174 + Q + + + IP + R L+ + + ++ +R + + + + Sbjct: 124 VEQHLQ-----PVGVPRATPERIPVEKNGRKVLIPISHIRYIEARDDYSCIYTFD-ERFL 177 Query: 175 TELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN--GLTVPVSRRY 229 + ++L E++ R HR Y+VNL +++I G +L +++ +PVSRR Sbjct: 178 STVSLAKFEAKLADHGFFRVHRGYIVNLEQVEDIEAVSAGILQLGIKDVPDKKIPVSRRR 237 Query: 230 LKSLKEAIGL 239 + SLK A+GL Sbjct: 238 VVSLKRALGL 247 >UniRef50_C5CI41 Two component transcriptional regulator, LytTR family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CI41_KOSOT Length = 235 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 73/242 (30%), Positives = 133/242 (54%), Gaps = 13/242 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IK ++VDDE +AR+ + +++ +IE++GE S+A E + + +P+V+FLDIQ+P + Sbjct: 3 IKAIVVDDEIIARKAIIELIEDYQNIEVMGEASSAEEALDIIKTKKPNVVFLDIQLPGFN 62 Query: 62 GLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+E V +L E + +VF++A+DEYA+ AFE A DYL+KP+ R T+ R+ + + Sbjct: 63 GVEFVELLNRLEEKVLVVFISAYDEYALDAFEVDAVDYLMKPVSPERFAVTVERIEKVLA 122 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 K+ V L+ +P + + ++ ++++ + S VY+ + E + L Sbjct: 123 KEGV---------LEKVPVKEDNLLEMVDLEEIFYFESMDKKVYLHTKEDELEVYRYNLS 173 Query: 181 TLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQ-AELILRNGLTVPVSRRYLKSLKEAI 237 LES P R H+ ++VNL ++ + L L NG +P+ + Y +K+ + Sbjct: 174 ELESSLPSFFARVHKSFIVNLKKVRRFSSWPGSRSYFLTLSNGKEIPIGKNYKSKIKKLL 233 Query: 238 GL 239 L Sbjct: 234 HL 235 >UniRef50_B1HWP9 Sensory transduction protein n=2 Tax=Bacillaceae RepID=B1HWP9_LYSSC Length = 247 Score = 242 bits (620), Expect = 5e-63, Method: Composition-based stats. Identities = 84/246 (34%), Positives = 137/246 (55%), Gaps = 9/246 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + V IVDDEPLAR LR L++ + + I GE + E + D LFLDI++ + Sbjct: 1 MNVYIVDDEPLARAELRYLLEQTALVNICGESESLDEFYHTTQYEQVDCLFLDIELGMNN 60 Query: 62 GLEMVGMLD-PEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GL++ L E +P I+F TAFDEYA++AFE +AFDY+LKP + R++ + +L +R Sbjct: 61 GLDLAKQLLLHEQKPEIIFATAFDEYALQAFEVNAFDYILKPFEAQRVQAAVEKLVAKRR 120 Query: 121 KQDVSLLPENQ----QALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTE 176 V + E + L + + RI L++++D+ + +S S V + +G+ F Sbjct: 121 AAQVKTIEEIKVSQLDKLDKLTVYVNDRILLMKIQDILYCTSEDSKTVVVTEQGR-FFAS 179 Query: 177 LTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSL 233 +L LE + +R HR ++VNL H+ E+ + + LIL N ++PVSR Y+K + Sbjct: 180 ESLAALEKKLTLKGFVRVHRAFIVNLEHIVELEPWSSSKYNLILYNRHSIPVSRLYMKDV 239 Query: 234 KEAIGL 239 ++ L Sbjct: 240 RKIFDL 245 >UniRef50_Q8EQQ3 Sensory transduction protein lytT n=1 Tax=Oceanobacillus iheyensis RepID=LYTT_OCEIH Length = 246 Score = 242 bits (620), Expect = 6e-63, Method: Composition-based stats. Identities = 73/244 (29%), Positives = 125/244 (51%), Gaps = 13/244 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I ++I +DE LARE L LQ+++DI + N + + + P+V+FLDI MP I+ Sbjct: 3 IHIMIAEDERLAREELMYLLQQENDIILCPSAENGDQLLNLYQEYNPNVIFLDIHMPGIN 62 Query: 62 GLEMVGMLD---PEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE 118 G+E+ + + I+F TA++ Y ++AFE A DYLLKP E R + + R+R+ Sbjct: 63 GIEVAKKIRNEFEDKDIIIIFTTAYESYGVQAFEIQATDYLLKPFSEERFKIAMNRIRKT 122 Query: 119 RSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELT 178 S + V + + + ++ ++ + F + V + + T++ Sbjct: 123 LSTKKV-----RKPKVDKLVVNLDEKMMVIDPNQIGFAAREGRTVKIHFISNEVIETKMN 177 Query: 179 LRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN--GLTVPVSRRYLKSL 233 L+ LE + P R HR YLVN+ ++EI NG L++++ T+PVSR K L Sbjct: 178 LKELEEKLSGFPFYRPHRSYLVNMDCIKEITPWFNGAYNLVIKDLAESTIPVSRTAAKGL 237 Query: 234 KEAI 237 +A+ Sbjct: 238 FDAL 241 >UniRef50_Q3CYS0 Response regulator n=8 Tax=Streptococcus agalactiae RepID=Q3CYS0_STRAG Length = 244 Score = 242 bits (620), Expect = 6e-63, Method: Composition-based stats. Identities = 75/243 (30%), Positives = 127/243 (52%), Gaps = 6/243 (2%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +KVL+VDDEP+AR L L + ++ E + + + + DV LDI + S Sbjct: 1 MKVLVVDDEPVARNELIYLLNKYDSNLVIAEAHDMATALAILLRETFDVALLDIHLRDDS 60 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GL++ ++ P ++F TA+D+YAI+AFE A DYLLKP + RL++ + R++ S Sbjct: 61 GLQLAEYINKMPKPPLLIFATAYDQYAIQAFEHDARDYLLKPYEFDRLKQAMDRVKGALS 120 Query: 121 KQDVSLLPENQQALK-FIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 + + K P T RIYL+ D+ + + + + + + K + +L Sbjct: 121 TSTIIESVTSGPLFKQQYPLTVEDRIYLVSADDILLIEAMQGKLIIQTPD-KNYEIDGSL 179 Query: 180 RTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEA 236 + + + P +R HR Y+VN+ ++ I N +L L N +TVPVSR +K LK+ Sbjct: 180 QQWQDKLPSSQFVRVHRSYIVNINAIKTIEPWFNQTLQLHLCNKITVPVSRANVKPLKQM 239 Query: 237 IGL 239 +G+ Sbjct: 240 LGI 242 >UniRef50_A5FCC1 Two component transcriptional regulator, LytTR family n=6 Tax=Bacteroidetes RepID=A5FCC1_FLAJ1 Length = 243 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 63/239 (26%), Positives = 121/239 (50%), Gaps = 13/239 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K + VDDEPLA + + F+ + +++ C NAVE + + + +PD++FLDI MP ++ Sbjct: 4 LKCIAVDDEPLALKLVETFIDQTPFLQLSASCDNAVEAMSLIREKQPDLVFLDINMPNLT 63 Query: 62 GLEMVGMLDPEH--RPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 G+E+ +L + P IVF TA++ YAI+ ++ +A DYLLKP + ++ Q Sbjct: 64 GMELARLLQEQPGQVPKIVFTTAYNHYAIEGYKVNAVDYLLKPFSYEEFLRAANKVLQIT 123 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE-GFTELT 178 + + P +FI + + +K++ ++ S V V + ++ + ++ Sbjct: 124 EEASNNFQPITAD-DEFIFLKVEYQWVRISLKEILYIESLKDYVKVHLDDNQKAILSLIS 182 Query: 179 LRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLK 234 L+ LE + P +R HR ++V+L + I I + + V +Y ++ K Sbjct: 183 LKALEEKLPSAKFMRVHRSFIVSLDKINAISKNS------IFIDKTEITVGEQYKETFK 235 >UniRef50_B1YHS9 Two component transcriptional regulator, LytTR family n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YHS9_EXIS2 Length = 231 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 74/242 (30%), Positives = 138/242 (57%), Gaps = 15/242 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ ++++DEPLAR+ LR + + ++++ E + E V L+PD++FLDI++ S Sbjct: 1 MRTILIEDEPLARDELRYHVVR-AGLDVIAETGHVGEAEQLVRTLQPDLVFLDIELIDGS 59 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GL++ L H P I+F+TA+D +A++AFE +A+DY+LKP D +R+ + + ++ ++ + Sbjct: 60 GLDVAKRLQSMPHPPAILFVTAYDTHALEAFELNAYDYILKPYDPSRISRAIEKIMRKPA 119 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + ++ + ++ LL +DV ++ + + + + + TL+ Sbjct: 120 LKTP--------RIERLAVESGEQLKLLSPQDVDYIVAESGKTKLVTR-SESYPSNDTLQ 170 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 LE + LR HR YLVNLA ++ I NG + ++ + VPVSR Y+K LKEA+ Sbjct: 171 ELERKLSGHRFLRVHRSYLVNLAAIEAIEPWFNGAYTIKIQ-QIDVPVSRTYVKVLKEAL 229 Query: 238 GL 239 G+ Sbjct: 230 GI 231 >UniRef50_C1AAX5 LytT family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AAX5_GEMAT Length = 272 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 74/261 (28%), Positives = 131/261 (50%), Gaps = 27/261 (10%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ LIV+DEPLAR +LR +Q +E+VGE +N + + ++ +L+PDVLFLDI +P + Sbjct: 11 LRTLIVEDEPLARIHLRDLVQGSMALELVGEAANGRDAVQSIAQLKPDVLFLDIHLPELD 70 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL ++ P++VF TA+D YA+ AFE A DYL+KP R E+ + RL ++ Sbjct: 71 GLAVLEQ--SLQPPHVVFTTAYDGYAVHAFELGAADYLVKPFTRERFERAVVRLLARVAQ 128 Query: 122 QDVSLLPENQQA---------------------LKFIPCTGHSRIYLLQMKDVAFVSSRM 160 D + ++ L+ + R+ + + + + + Sbjct: 129 HDDAGAGDDAPPEGPALMERVRSLHHQSSGDARLRHVYVRERGRVLPIAVDTIERLEADD 188 Query: 161 SGVYVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELIL 217 V + G+ + L L R +R HR + VNL H++ + D+G+ +++ Sbjct: 189 DYVVLVVG-GRRHLLTVPLSELLGRLDAGRFVRIHRSHAVNLDHVRAMLPADSGRWAVVM 247 Query: 218 RNGLTVPVSRRYLKSLKEAIG 238 ++G V SR + L+E++G Sbjct: 248 QSGERVLASRTGTRQLRESMG 268 >UniRef50_D2QK93 Two component transcriptional regulator, LytTR family n=5 Tax=cellular organisms RepID=D2QK93_9SPHI Length = 245 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 79/247 (31%), Positives = 133/247 (53%), Gaps = 11/247 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K LI+DDE LAR LR L+ ++I+GE +NA E + + +L P++LFLDIQMP + Sbjct: 1 MKTLIIDDERLARNELRRLLENFPKVQIIGEAANADEALPMIEELEPELLFLDIQMPGKN 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E++ + P ++F TAFDEYAIKAFE +A DYLLKP++ ARL + + R+ +E+ Sbjct: 61 GFELLQSI-EGKTPEVIFTTAFDEYAIKAFEYNALDYLLKPVELARLSEAIHRVEEEQHI 119 Query: 122 QDVSLLPENQQALKFI------PCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFT 175 + S + K + + + +++ V S + V + + ++ Sbjct: 120 PEASGAGPIGISTKILGENDQVFVKDGEKCWFVKLGKVRLFESMGNYVRLYF-DDQKPLV 178 Query: 176 ELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKS 232 +L LE R R +R++++NL +++I +G + LR G + +SRR Sbjct: 179 LKSLNALEDRLNPATFFRANRKHIINLQWIEKIEPWFSGGLLVTLRGGDKIEISRRQAIR 238 Query: 233 LKEAIGL 239 K+ + L Sbjct: 239 FKDLLSL 245 >UniRef50_Q1IJW2 Transcriptional regulator, LytR/AlgR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJW2_ACIBL Length = 254 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 70/243 (28%), Positives = 123/243 (50%), Gaps = 6/243 (2%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+V+ VDDEP A + + ++E+ + +V ECS+A I ++ +LRP V+FLD+QMP + Sbjct: 6 IRVITVDDEPFALQRISRLVREEPSLSLVAECSSAASAIESICELRPQVVFLDVQMPEVD 65 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G ++ P++VF TA++EYA++AFE A DYLLKPI + R + +L+ + Sbjct: 66 GFGVLDAFQGPTLPWVVFTTAYEEYAVRAFEASAVDYLLKPISQERFSAAVGKLKTAANS 125 Query: 122 QDVSLLPE--NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 S + + I + +L V +S+ + V GK T+ Sbjct: 126 VGTSNARSGLDASRYERILIKTDGKFVMLDPGQVERISAAGNYAIVY-AAGKSYIIRETM 184 Query: 180 RTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEA 236 ++ R R +R +VNL+ +QE+ +G+ + G V ++R Y +L+ Sbjct: 185 TRIQCRVDPRRFFRVNRSEIVNLSFVQELEPTCHGEYSITTIFGTKVTLTRTYRDALQRM 244 Query: 237 IGL 239 + + Sbjct: 245 LSM 247 >UniRef50_A4E9X0 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9X0_9ACTN Length = 244 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 77/242 (31%), Positives = 118/242 (48%), Gaps = 9/242 (3%) Query: 3 KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 +L+VDDEP R LR L++ + + + E N E + ++ +P+VLFLDI MP SG Sbjct: 6 NILVVDDEPPIRAELRYLLEKDTRVGQIAEAGNVTEAVESILSNKPNVLFLDITMPGRSG 65 Query: 63 LEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 +E+ L + P +VF+TAF E+A A+ A DY++KP+++ARL K L ++ Sbjct: 66 IELAETLQNLKTPPVVVFVTAFAEFAADAYNLDAVDYVVKPVEDARLSKALDKIEAALGA 125 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 + V P + + + DV + +R EG ++ + Sbjct: 126 RRVIHAPRQPL---RLTVDRGGKKVFIPAADVCYFEARADFCNAICAEG-TYLINESISS 181 Query: 182 LESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL-TVPVSRRYLKSLKEAI 237 LE R +R HR YLVNL + + + G EL L TVPVSRR +K + Sbjct: 182 LERRLVSEGFIRVHRSYLVNLEDVHNVEIGSTGLMELRLDRVTSTVPVSRRRAAEVKAHL 241 Query: 238 GL 239 GL Sbjct: 242 GL 243 >UniRef50_Q47XT5 Response regulator n=4 Tax=Gammaproteobacteria RepID=Q47XT5_COLP3 Length = 275 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 79/271 (29%), Positives = 120/271 (44%), Gaps = 35/271 (12%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ +IVDDEPLA LR L + +IEI+ EC N E I L PD++FLDIQMP + Sbjct: 4 LRTIIVDDEPLALNLLRAKLNKVPEIEIIAECKNGREAIEKTMDLAPDLIFLDIQMPGVD 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G ++ L + P ++F TAF++YA+ AF+ HA DY+LKPIDE R+ + ++R Sbjct: 64 GFGVIKKLQSDIVPLVIFTTAFEQYALDAFDVHAVDYILKPIDEERITRAVSRAIVRFET 123 Query: 122 QDVSLLP-------------------------------ENQQALKFIPCTGHSRIYLLQM 150 ++ + I I LL+ Sbjct: 124 EEETEHKSRIIGAIDTINERENSASSSQSSQGQSSLGQNKGNLEHKIIIKDRDDITLLKQ 183 Query: 151 KDVAFVSSRMSGVYVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRL 207 D+ +V + V +G TL+ L R HR +VNL ++Q++ Sbjct: 184 ADIEWVDAAGDYCCVH-AQGVTHIKRSTLKNLLDDLDPSIFKRVHRSTIVNLNYIQKVIP 242 Query: 208 EDNGQAELILRNGLTVPVSRRYLKSLKEAIG 238 G+ L L V VSR Y +K+ + Sbjct: 243 HTKGEYFLKLGEYDQVKVSRNYRDVIKDFLS 273 >UniRef50_Q87K77 Uncharacterized response regulatory protein VPA0021 n=17 Tax=Vibrionales RepID=Y4021_VIBPA Length = 263 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 74/257 (28%), Positives = 129/257 (50%), Gaps = 26/257 (10%) Query: 3 KVLIVDDEPLARENL-RVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +I DDEPL R +L + + +++IV + ++ + + A+ + +PD+ FLDI+MP + Sbjct: 6 TAIIADDEPLLRHHLDKSLAEVWPELDIVAKVADGEQALLAIEQSQPDIAFLDIRMPVLD 65 Query: 62 GLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+ + L + P IVF+TA+D+YAIKAFE++A DYLLKPI +ARL+ T R++ S Sbjct: 66 GMSLAQKLNRLANPPLIVFVTAYDDYAIKAFEQNAADYLLKPISDARLQTTCERVKARLS 125 Query: 121 KQ----------------DVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVY 164 ++ P+ Q L++I T I+L+ DV + + V Sbjct: 126 QRGSDNSHVQMNSLLEQLQQLSAPQTPQYLQWIKATQGDDIHLIATSDVLYFKAEEKYVS 185 Query: 165 VTSHEGK----EGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELIL 217 V + +GK E +L+ L + + HR +V ++ + ++ + G+ + Sbjct: 186 VYAQQGKGEVQEYLIRTSLKELIGQLNPEQFWQVHRSSVVQVSKISKVNKDFAGRMFVY- 244 Query: 218 RNGLTVPVSRRYLKSLK 234 +PVSR K Sbjct: 245 VGETKLPVSRASQSLFK 261 >UniRef50_Q26BE1 Response regulator, LytR/AlgR family n=3 Tax=Flavobacteria RepID=Q26BE1_9BACT Length = 251 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 74/248 (29%), Positives = 129/248 (52%), Gaps = 14/248 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQ-SDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 ++VLI+DDE AR L L+E +++E+VGE ++ +G+ + PD++FLDI+MP Sbjct: 1 MRVLIIDDEKRARHLLHTLLKEHLNEVEVVGEATDLQDGLKLIESTTPDLIFLDIEMPGE 60 Query: 61 SGLEMVGMLDPE-HRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 SGLE++ + P+ H+ I+F+TA+++YA++AF+ +A DYLLKPID L+ A+ R++ Sbjct: 61 SGLEIIKYIKPDQHQFQIIFVTAYNQYAVEAFKTNAIDYLLKPIDIEELKTAFAKARKQH 120 Query: 120 SKQDVSLLPENQQ------ALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 Q V+ E + +L I D+ + + V + +GK Sbjct: 121 HSQQVTQQLEQLRRSVKHLSLDKIVMEVPRGYMFASHNDIIYFEADGMYTKVITTDGKTN 180 Query: 174 FTELTLRTLESRTP----LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRY 229 L+ + +CHR +LVNL H+ E+ D +++ N +P+S+ Sbjct: 181 LICKPLKHFVEQLATNDLFFKCHRSFLVNLKHITELVKHDGD--YIVMENQRHIPISKSK 238 Query: 230 LKSLKEAI 237 + I Sbjct: 239 RDQFLKVI 246 >UniRef50_B5JSZ7 Response regulator receiver:LytTr DNA-binding region n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JSZ7_9GAMM Length = 246 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 75/241 (31%), Positives = 127/241 (52%), Gaps = 6/241 (2%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I VLIVDDEP AR+ L +++ E+V E N ++ I ++ + ++ LDI+MP + Sbjct: 3 ISVLIVDDEPPARQRLVRLVEKTPGYEVVAEAGNGIDAIARFNETQAQIVLLDIRMPVMD 62 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+E L E P I+F TA+ ++A++AFE HA DYLLKPI + RL++ L ++ Sbjct: 63 GIEAAQHLTQHETPPAIIFTTAYSDHALQAFESHAIDYLLKPIRQERLDQALEAAQRSNL 122 Query: 121 KQDVSLLPENQ-QALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 Q S+ ++ + + I + L+ + D+ + + V + H G E E L Sbjct: 123 AQVKSVAEDSDSDSRQHICVRNRGNLELVDIDDIFYFFAEHKYVTLR-HRGGEVLIEEAL 181 Query: 180 RTLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKSLKEA 236 LE LR HR L+ + LQ + +G ++L+N + VSRR+L ++++ Sbjct: 182 IGLEKEFGDRFLRIHRNCLIAVEQLQGLEKNADGTHRVVLKNCEDRLEVSRRHLSTVRKL 241 Query: 237 I 237 + Sbjct: 242 L 242 >UniRef50_D0MDS1 Two component transcriptional regulator, LytTR family n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MDS1_RHOM4 Length = 275 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 80/273 (29%), Positives = 130/273 (47%), Gaps = 36/273 (13%) Query: 1 MIKVLIVDDEPLARENLRVFLQ---EQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQM 57 M+++LIVDDEP AR LR L+ + + E ++ VE + + + D+L LD++M Sbjct: 1 MLRILIVDDEPPARRRLRKLLEPLRASGRVAAIEEAADGVEALEKLQQQTFDLLLLDVRM 60 Query: 58 PRISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ 117 P + G E++ +DP RP++VF TA+D+YA+KAFE HA DYLLKPI++ RL + +AR+ Q Sbjct: 61 PELDGFEVLERIDPNRRPFVVFTTAYDDYALKAFEAHAIDYLLKPINQERLLEAVARVEQ 120 Query: 118 E----------------------RSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAF 155 + +Q L+ + + RI ++ + + Sbjct: 121 LQTTAQLREQEERLSRLLDWLESQQQQAAPAPGPATSYLEQLSVSYRDRILIIPVTRLVS 180 Query: 156 VSSRMSGVYVTSHEG--------KEGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQE 204 + E ++ TL LE+R +R HR +V L H++E Sbjct: 181 AEIHDGITRLYVLEEEPGAPPRLRQHVVSYTLDQLEARLNPHDFMRVHRSAIVQLRHIRE 240 Query: 205 IRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 + +G+ +L L V SR K LKE + Sbjct: 241 LIPWFSGRYKLKLTGDHEVIASRERSKLLKERL 273 >UniRef50_A4BK03 Transcriptional regulator n=1 Tax=Reinekea blandensis MED297 RepID=A4BK03_9GAMM Length = 253 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 83/254 (32%), Positives = 130/254 (51%), Gaps = 20/254 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 + +LI DDEPL R +L+ L+ D +IV + +N E + + + RPDV FLDI+MP + Sbjct: 1 MNLLIADDEPLLRFHLQKALENVWPDADIVAQAANGEEALALIDECRPDVAFLDIKMPGL 60 Query: 61 SGLEMVGMLDPE-HRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +GL++ L + +VFLTA+D+YA+ AFE A DYLLKP+DE RL KT+ RL+Q + Sbjct: 61 TGLDVALKLAQKGIETRVVFLTAYDDYAVAAFERGAIDYLLKPLDENRLVKTVERLQQLQ 120 Query: 120 SKQDVSLLP-------------ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT 166 ++ S P E L ++ + I ++ + +V F + V Sbjct: 121 AESSASTQPPQLDALVELVNRVERPGGLVWLNVQKGNAIKVIAVNEVRFFRAEDKYTTVV 180 Query: 167 SHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAEL-ILRNGLT 222 + + E +++R LE + R HR +VN+ H+ D G E+ IL Sbjct: 181 TDDD-EFLMRMSIRQLEEQLDLTYFWRIHRSTVVNMQHVDRAERNDAGNYEVYILGRSKP 239 Query: 223 VPVSRRYLKSLKEA 236 +PVSR + K Sbjct: 240 LPVSRAHQHLFKAQ 253 >UniRef50_A0LZC2 Two-component system response regulator containing LytTR DNA-binding domain n=1 Tax=Gramella forsetii KT0803 RepID=A0LZC2_GRAFK Length = 254 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 67/255 (26%), Positives = 127/255 (49%), Gaps = 18/255 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K L++DDE LAR + L++ IE++GECSN I ++ +PD++FLDI M ++ Sbjct: 1 MKALVIDDEELARRRVLNLLEDVEKIEVIGECSNGRTAIERINTDKPDLVFLDINMKDMN 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E++ ++ +P ++F+TA+D YA+KAF+ AFD+LLKP + R KT+ ++ + Sbjct: 61 GFEVLKQVEISPKPIVIFVTAYDNYALKAFDAEAFDFLLKPFKDQRFFKTINKVLETTKT 120 Query: 122 QDVSLLPE--------------NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTS 167 + + +++ IP ++ L+ + ++ + + Sbjct: 121 EANVTFEKRLVEFFHEYSKGGLQLNSVQKIPVKQGNKTALVDPNHILYIQASGYYAEIFV 180 Query: 168 HEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVP 224 + K+ +L L +R HR + NL ++ EI D + + + +G + Sbjct: 181 -DSKKYVLRESLNNLSEILDSNTFVRIHRSTIANLKYVNEIIHSDYSEIDAKMTDGKLLH 239 Query: 225 VSRRYLKSLKEAIGL 239 VS+ + K E IG+ Sbjct: 240 VSKSHKKEFLEKIGI 254 >UniRef50_Q47KY1 Response regulator receiver n=1 Tax=Thermobifida fusca YX RepID=Q47KY1_THEFY Length = 264 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 75/243 (30%), Positives = 119/243 (48%), Gaps = 9/243 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++VL VDD PLA L L+ ++ V + + + + R D +FLDI MP + Sbjct: 8 LRVLAVDDVPLALTELCRLLRAAPEVGEVVAADDPISALRNIQADRFDAVFLDISMPGLD 67 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+E+ +L P IVF+TA +E+A+ A+ A DYLLKP+ RL L ++ + S Sbjct: 68 GVELANLLSKLSDPPVIVFVTAHEEHAVTAYGIGAVDYLLKPVRAERLAMALTKVVRMLS 127 Query: 121 KQDVSLLPE---NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL 177 + P A+ +P R ++ DV FV + V + + EG + Sbjct: 128 AGTAPVTPHRVRRPDAMAVLPVETAGRTRYVRRSDVRFVEANGDYVRLHTPEG-VHLVRM 186 Query: 178 TLRTLES---RTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLK 234 + LE + LR HR YLV L+ ++E+R + +G G VPVSRR+ + L+ Sbjct: 187 PISRLEEYWADSGFLRVHRGYLVALSAIRELRSDSSGGLLAHTDLGD-VPVSRRHARELR 245 Query: 235 EAI 237 E + Sbjct: 246 EQL 248 >UniRef50_A0PY89 Sensory transduction protein lytT n=3 Tax=Clostridium RepID=A0PY89_CLONN Length = 236 Score = 240 bits (614), Expect = 3e-62, Method: Composition-based stats. Identities = 68/243 (27%), Positives = 129/243 (53%), Gaps = 12/243 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + ++VDDE +RE L+ F+++ S+I+I E +++E + + + +PDV+FLDI MP++ Sbjct: 1 MNCIVVDDEYPSREELKFFIKQASNIDIDEEFDDSIEALEYIQQNKPDVVFLDISMPKLD 60 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+ + +++ +++ +VF+TA+ E+AI+AFE AFDY+LKP E R+ TL RL S Sbjct: 61 GMSLAHIINEMDNKIIVVFITAYKEHAIEAFETEAFDYILKPYSEERIISTLKRLENLES 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 +++ + + I ++ +L + D+ + + V + + ++ Sbjct: 121 QKNDNCIK------NKIALRKDEKLKVLGISDICYCRADEKKTIVYTAID-DYIENCSIS 173 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKSLKEA 236 + P R HR Y+VNL + EI N + L+ +PVSR + K+ Sbjct: 174 DFYKKLPKKVFFRTHRSYIVNLDKITEIIPWFNNTYIIKLKGLDEEIPVSRNKMNDFKQL 233 Query: 237 IGL 239 + + Sbjct: 234 MNI 236 >UniRef50_C0ZBJ6 Two-component response regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBJ6_BREBN Length = 242 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 79/242 (32%), Positives = 124/242 (51%), Gaps = 10/242 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+V+I +DE LARE L L ++ D+E++ +N E + V PDV+FLD++MP + Sbjct: 3 IRVMIAEDERLAREELSYLLLQEGDVELLPYATNGRELLEMVDVHEPDVVFLDMKMPELE 62 Query: 62 GLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G + ML + P IVF TA++E+AI AF+ +A DYLLKP + RL +T+ R+R+ Sbjct: 63 GAQAARMLASRKQHPLIVFCTAYEEFAIDAFKLYAVDYLLKPTEPKRLVETMQRIRERLV 122 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 K V + Q + +SR+ ++ + + V + + T +TL Sbjct: 123 KPKVEPV---QTKRTKLLVEDNSRLVVIDPTTIVYAVREERYVQIVTQTA-TYSTRMTLT 178 Query: 181 TLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL--TVPVSRRYLKSLKE 235 L + R H+ YLVNL + E+ NG LIL+ +PVSR K L + Sbjct: 179 QLAEKLFAYDFFRTHKSYLVNLQFVSELEPWFNGAYNLILKGEGRPRIPVSRTSAKDLLK 238 Query: 236 AI 237 + Sbjct: 239 RL 240 >UniRef50_C7PAR0 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PAR0_CHIPD Length = 237 Score = 239 bits (612), Expect = 4e-62, Method: Composition-based stats. Identities = 60/236 (25%), Positives = 120/236 (50%), Gaps = 12/236 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ + VDDEPLA + L +++ +E+V +C++A E I + + D++FLDIQMP ++ Sbjct: 3 LRCIAVDDEPLALDLLEDNIRQVPFLEMVAKCADAFEAIKVLQETTVDLIFLDIQMPGLT 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL+ + L H+P I+ +TA+++YA++ FE DYL+KP+ R K + R+ Sbjct: 63 GLQFIQSL--AHKPMIILITAYEKYALEGFELDVTDYLVKPVSLPRFIKACNKARELHQL 120 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT-SHEGKEGFTELTLR 180 + L +F + + + D+ ++ + + + + K T + L+ Sbjct: 121 KHQQLTAAPGTTPEFFFVNSDYSLLKINVADIIWIEALKDYIRIHLTGTAKPVVTRMPLK 180 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSL 233 +E + P +R H+ Y++ +AH+ IR + + +PV Y +++ Sbjct: 181 QVEEQLPPARFIRIHKSYIIAVAHITAIRKNS------VFIGTMELPVGDNYREAV 230 >UniRef50_C6VRX1 Two component transcriptional regulator, LytTR family n=3 Tax=Sphingobacteriales RepID=C6VRX1_DYAFD Length = 245 Score = 239 bits (612), Expect = 4e-62, Method: Composition-based stats. Identities = 62/244 (25%), Positives = 118/244 (48%), Gaps = 13/244 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ + VDDEPLA + F+++ + + G S+AVE + ++ DV+FLDIQMP ++ Sbjct: 5 LECIAVDDEPLALGLVCAFIEKTPFLNLAGRYSSAVEALQVINSKPIDVIFLDIQMPDLT 64 Query: 62 GLEMVGMLDP--EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 G+E+ +L+ P I+F TAF++YA+ F A DYLLKP + + ++ + Sbjct: 65 GIELARVLEKAGNKAPRIIFTTAFNQYALDGFRVDAIDYLLKPFNYEEFLRAASKAQAYV 124 Query: 120 SK-QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSH-EGKEGFTEL 177 Q S + +++ ++ + D+ + V V + K + Sbjct: 125 ELVQKASSAGSAEPKDEYLFLKVEYQLVRIAYDDILYTEGLKDYVKVHLKSDPKPVLSLT 184 Query: 178 TLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLK 234 +L+ LE + P +R HR ++VNL + + I +++PVS +Y ++ Sbjct: 185 SLKALEEKLPASKFMRVHRSFIVNLDKISAVTRNT------IQIGAISIPVSDQYKEAFN 238 Query: 235 EAIG 238 + + Sbjct: 239 QFLS 242 >UniRef50_Q01R04 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01R04_SOLUE Length = 253 Score = 239 bits (612), Expect = 5e-62, Method: Composition-based stats. Identities = 74/251 (29%), Positives = 125/251 (49%), Gaps = 16/251 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ LI+DDE RE LR L DI I GE + VE + + LRPD+LFLDI+MP ++ Sbjct: 1 MRSLIIDDEESGRERLRRMLAAHPDIVIAGEARDGVEAVQQIEALRPDLLFLDIEMPGLT 60 Query: 62 GLEMVGMLDPEHR-PYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ--- 117 G E++ L P P ++F+T +D++A+ A++ +A YLLKP++ RL + +AR R+ Sbjct: 61 GFEVLQALPPGVSLPLVIFVTGYDQHALAAYDANALAYLLKPVEADRLAQAVARARKLHG 120 Query: 118 ------ERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGK 171 + + + E + L+ I C RI L+ + + + V + + Sbjct: 121 TPGEPARAGENILRVARETPRNLRQIVCRKRDRILLVPPEQILWFQVEDGLVKAHTA-AE 179 Query: 172 EGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN--GLTVPVS 226 + L LE+ R R+ LVNL+ ++EI+ L + + G + +S Sbjct: 180 TFWVNYQLNELEAGLDSALFFRARREVLVNLSCIKEIKPYFKSGFLLTMADAAGTEIAIS 239 Query: 227 RRYLKSLKEAI 237 R K ++ I Sbjct: 240 ERQSKQFRQRI 250 >UniRef50_C1AA08 LytT family two-component response regulator n=2 Tax=Bacteria RepID=C1AA08_GEMAT Length = 278 Score = 239 bits (612), Expect = 5e-62, Method: Composition-based stats. Identities = 77/275 (28%), Positives = 122/275 (44%), Gaps = 39/275 (14%) Query: 1 MI-KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 MI +VLIVDDEPLARE L + + + E N + I + RPDV+ LDIQMP Sbjct: 1 MISRVLIVDDEPLARERLSELTRRLAPTAALREAGNGTDAITLIGSWRPDVVLLDIQMPG 60 Query: 60 ISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +G E++ + + P +F++A DE+A++AF+ A DYLLKP D+AR RL Sbjct: 61 GTGFEVIDAVGVDRMPATLFISAHDEFALQAFDVAAVDYLLKPFDDARFAIAWRRLTDRV 120 Query: 120 S----------------------------------KQDVSLLPENQQALKFIPCTGHSRI 145 + + I R Sbjct: 121 ATGAVLEQARILGALLSARGGNDTSALSPAGGTATSTTARPTGGAPRFADRIVVKHDQRT 180 Query: 146 YLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHL 202 ++ + DV ++ S + V + + TL ++ESR LR HRQ +V++ + Sbjct: 181 MVVMLADVQWIESDGNYVVLH-AGKERYQVRETLTSIESRLDPRRFLRIHRQTIVDMRAM 239 Query: 203 QEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 +E++ G +ILR+G + VSR Y + + + Sbjct: 240 KELQPWFGGDQIMILRDGTRLRVSRNYRTEVSKRL 274 >UniRef50_D0ZEJ7 Two-component system response-regulator n=3 Tax=Bacteria RepID=D0ZEJ7_EDWTE Length = 245 Score = 239 bits (612), Expect = 5e-62, Method: Composition-based stats. Identities = 74/247 (29%), Positives = 123/247 (49%), Gaps = 10/247 (4%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+ +IV+DE LARE L + S I + + + +E + R D +FLDIQ+P I Sbjct: 1 MLTAIIVEDEYLAREELAYLIGRHSQIRVQAQFEDGLEAFKYLQSHRVDAVFLDIQIPSI 60 Query: 61 SGLEMVGML----DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR 116 G+ + L E P +VF+TA E+A +AFE F+Y+LKP +EAR+ + L +L Sbjct: 61 DGMMLARNLLGQQRGEGGPAVVFVTAHKEFAAEAFELEVFNYILKPYNEARIVQVLQQLE 120 Query: 117 QERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTE 176 Q+ + + N A + T RI + + + + + YV + + + + Sbjct: 121 QQARRPAPGSVEVNAPAAT-VNLTKGERIIVTPCEQIYYAEADEKLTYVYTRDDRVVLS- 178 Query: 177 LTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKS 232 ++L SR P RCHR Y VN+ ++EI N + L + +PVSR +K+ Sbjct: 179 MSLSEFISRLPTERFFRCHRSYCVNIDKIREIVPWFNSTYLIHLHDLDAEIPVSRSNIKA 238 Query: 233 LKEAIGL 239 ++ + L Sbjct: 239 FRQLMRL 245 >UniRef50_C6W647 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W647_DYAFD Length = 248 Score = 239 bits (612), Expect = 5e-62, Method: Composition-based stats. Identities = 71/248 (28%), Positives = 124/248 (50%), Gaps = 14/248 (5%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQ-SDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 MIK +I+DDE E L L+ + + CS+ +GI A+ + RPDV+FLDI+MPR Sbjct: 1 MIKCVIIDDENNCLEMLEWLLKTYAPGVSVAAMCSSGEKGIEAIREHRPDVVFLDIEMPR 60 Query: 60 ISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 ++G +M+ D H +VF TA+D++AIKAF+ A +YLLKPID L +T+ R+ ++R Sbjct: 61 MNGFDMLEKFDKLH-FDVVFTTAYDKFAIKAFKYSALNYLLKPIDPDDLIETIRRIEEKR 119 Query: 120 SKQDVSLLP-------ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 S + + + + I T + + +D+ + + + V G++ Sbjct: 120 SVPSREQIELLFQNVRQMKNTPQRIALTAGDGMIFVPTQDILYCEAESNYTSVVLVTGRK 179 Query: 173 GFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRY 229 L+ ++ R H YLVNL +++ + G +++ N + + +SR Sbjct: 180 VVVSKVLKDIDEALSGPDFYRVHNSYLVNLNRIKKFVRGEGG--YIVMDNDVAISISRSR 237 Query: 230 LKSLKEAI 237 + E Sbjct: 238 RQEFMEMF 245 >UniRef50_Q5WAM2 Two-component response regulator n=2 Tax=Bacillus RepID=Q5WAM2_BACSK Length = 246 Score = 239 bits (610), Expect = 8e-62, Method: Composition-based stats. Identities = 83/243 (34%), Positives = 129/243 (53%), Gaps = 9/243 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ L+ DDE +RE L L IE+VGE ++ E + L+PD+LFLDI+MP + Sbjct: 8 IRTLVADDEKYSREELLYLLGFFPQIEVVGEAASGHETAAKMMDLQPDLLFLDIEMPEMD 67 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G E+ + + P+IVF TA+ ++A++AF+ A YL+KPIDE RL +T+A++ Sbjct: 68 GTEIAAIAKQMKQPPFIVFATAYPQFAVEAFQLQAKGYLIKPIDETRLAETIAQVEDML- 126 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 ++ E + + G I+ L+ + +A+ V + G T LTL+ Sbjct: 127 --ALTAERERTKPPAKLAVEGDEAIHFLEPESIAYAYRDEKSTKVITATG-AYETRLTLK 183 Query: 181 TLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKSLKEA 236 LE+R R H+ YLVN A + E+ NG +L L+ +PVSR Y+K L+ Sbjct: 184 ELETRLAPYSFFRVHKSYLVNTACITEMNAWFNGAYQLKLKGIDDHIPVSRNYVKPLRSQ 243 Query: 237 IGL 239 I L Sbjct: 244 IEL 246 >UniRef50_A9DKT5 Two-component system regulatory protein n=1 Tax=Kordia algicida OT-1 RepID=A9DKT5_9FLAO Length = 240 Score = 237 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 75/242 (30%), Positives = 128/242 (52%), Gaps = 9/242 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I +IV+D LAR L+ L++ S IE++ E N + ++ +P VLFLDI MP + Sbjct: 4 ITAIIVEDSRLARNELKELLKKHSQIELIAEAENVDKAYELINSKQPQVLFLDINMPEKN 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G +++ ML ++ P +F TA+DEYAIK+FE +AFDYLLKPI++ R KT+ ++ K Sbjct: 64 GFDLLEML--DNVPLTIFTTAYDEYAIKSFEYNAFDYLLKPINQTRFSKTIEKVIATIEK 121 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 + P + + I +L+++ ++A + V K +L Sbjct: 122 EATDEKP--FELHRQIFIKEGENCWLIRISEIAVFEIVGNYTRVYFENNKP-LIYKSLNQ 178 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKSLKEAI 237 +E++ P R +RQ ++NL H+ ++ NG+ ++ ++N + VSRR K+ Sbjct: 179 IETKLPEETFFRANRQQIINLNHVDKVIPWFNGKLKVTIKNSSQEIEVSRRQSYKFKDIF 238 Query: 238 GL 239 G Sbjct: 239 GF 240 >UniRef50_A1ZP21 Response regulator of the LytR/AlgR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZP21_9SPHI Length = 263 Score = 237 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 75/262 (28%), Positives = 129/262 (49%), Gaps = 28/262 (10%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IKVLIVDDEP+ARE + + L E + +++VGE SN E + + PD+LFLDIQMP ++ Sbjct: 3 IKVLIVDDEPIAREMINILLAEHTGLQVVGEASNGEEALKLIDTQTPDLLFLDIQMPGMT 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+ + + ++VF+TA+DEYA+ AFE +A DYLLKP + R +T+ +++ + + Sbjct: 63 GISLAQKFAGFYG-HLVFVTAYDEYALAAFELNAIDYLLKPFTKKRFHQTIEKVQSKFQQ 121 Query: 122 Q-----------------------DVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSS 158 +L+ N L ++I + + +V + Sbjct: 122 ASLNRVEDKLLQLAQDYSQLKAQVQPTLIDSNDTYLSRFVARQANKIVFIDIVEVEAIVG 181 Query: 159 RMSGVYVTSHEGKEGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAEL 215 + V H G + TL+ +R LR HR Y++ + ++E+ NG+ Sbjct: 182 ASDYIEVH-HAGNKSLVNTTLQETAARLNPEDFLRIHRSYILPIRQIKEVVPHFNGEYFF 240 Query: 216 ILRNGLTVPVSRRYLKSLKEAI 237 +++NG R Y +++ Sbjct: 241 VMKNGQKYKSGRTYKTQVQQLF 262 >UniRef50_Q025M1 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q025M1_SOLUE Length = 247 Score = 237 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 75/250 (30%), Positives = 128/250 (51%), Gaps = 14/250 (5%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M + +VDDE A + L LQ +EIVG N V I A+ PD+LFLDIQMP + Sbjct: 1 MFRAYLVDDELPAVKRLARLLQATGRVEIVGAEMNPVAAIEAIRVASPDILFLDIQMPGL 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G +++ ++ + P+++F TA+D+YA+KAFE ++ DYLLKP++ L++ L +L Q ++ Sbjct: 61 TGFDLLARIERQ--PFVIFTTAYDQYALKAFEVNSIDYLLKPVEPEELDRALNKLEQFQN 118 Query: 121 KQDVSLLP------ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF 174 + L ++ +P R L++ + ++ + +GK Sbjct: 119 ARGPVDLRGVLEALSRHAPVQRVPIRMGERTRFLEVGRITHFFTQGRLTFAA-ADGKTHA 177 Query: 175 TELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG--LTVPVSRRY 229 + T+ LE + R HR LVNL L+E+ G+ L++ + V+R Sbjct: 178 VDCTIAELEQKLGPSRFFRIHRGTLVNLDWLEELTPWFTGRMAARLKDEKRTELIVARDR 237 Query: 230 LKSLKEAIGL 239 ++ LK +GL Sbjct: 238 VRLLKRHLGL 247 >UniRef50_C7PE44 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PE44_CHIPD Length = 244 Score = 237 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 65/240 (27%), Positives = 119/240 (49%), Gaps = 14/240 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + +I+DDEPLARE L +++E +++V C+N VE I + + D++FLDIQMP+++ Sbjct: 1 MNCVIIDDEPLAREGLSSYVREVDFLQLVATCTNPVELIRLLDEHPVDLIFLDIQMPKMN 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS- 120 G++ + ++ P ++ TAF YA++ F+ + DYLLKPI R K + + Sbjct: 61 GIDFLKIVQK--PPMVIITTAFPSYALEGFQLNVMDYLLKPITFDRFFKAANKAKDYYQL 118 Query: 121 -KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 + V + + + S+ + D+ +V + V + + +GK T L L Sbjct: 119 LHKPVGEAAKTAKTEDYFFIKCGSKYEKIFFDDILYVQGMQNYVTIHTRKGK-YMTLLYL 177 Query: 180 RTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEA 236 + LE +R H+ Y+V ++ ++ I + I +P+SR Y + E Sbjct: 178 KNLEENLDRKAFIRVHKSYIVAVSKIEGIEGNE------IFIQSDKIPISRNYHDMVIEQ 231 >UniRef50_Q484G6 LytTr DNA-binding response regulator n=1 Tax=Colwellia psychrerythraea 34H RepID=Q484G6_COLP3 Length = 260 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 84/248 (33%), Positives = 131/248 (52%), Gaps = 11/248 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 KVL+VDDEP AR+ L FL+E SD ++V E N VE + + K P ++FLDIQMP++ Sbjct: 11 YKVLVVDDEPAARQKLIHFLKEHSDFDVVAEARNGVEALECIDKFTPSLVFLDIQMPKLD 70 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+ + L+ IVF+T F+EYAI AFE +A DYLLKP D+ARL KTL R R+ Sbjct: 71 GISVASNLEFNKEVSIVFVTGFNEYAISAFELNAVDYLLKPYDKARLAKTLNRFREFSGT 130 Query: 122 QDVSLLPE-------NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF 174 +P+ +Q K + I + + +V ++ S + V + E Sbjct: 131 TQKFDIPKLVQDYRTDQHYPKTLLFKAEGSIEVAKADEVQWIESSGNYVKICL-ERTAFI 189 Query: 175 TELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLK 231 TL ++S+ +R HR +++N+ + ++ G L LR+G + +SR Y + Sbjct: 190 ARQTLTGVQSQLDPTIFVRIHRSHVININEVIQVTPISKGDHTLQLRSGTELRLSRAYQE 249 Query: 232 SLKEAIGL 239 + + L Sbjct: 250 NFFKVFNL 257 >UniRef50_P26275 Positive alginate biosynthesis regulatory protein n=35 Tax=Bacteria RepID=ALGR_PSEAE Length = 248 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 70/246 (28%), Positives = 120/246 (48%), Gaps = 11/246 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVG-ECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 + VLIVDDEPLARE L + + ++ SN E + + L+PD++ LDI+MP + Sbjct: 1 MNVLIVDDEPLARERLARLVGQLDGYRVLEPSASNGEEALTLIDSLKPDIVLLDIRMPGL 60 Query: 61 SGLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 GL++ L + E P ++F TA DE+A++AF+ A YL+KP+ L + L + + Sbjct: 61 DGLQVAARLCEREAPPAVIFCTAHDEFALEAFQVSAVGYLVKPVRSEDLAEALKKASRPN 120 Query: 120 SKQDVSLLPENQQ----ALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFT 175 Q +L I I L+ +++V F + V + +G E Sbjct: 121 RVQLAALTKPPASGGSGPRSHISARTRKGIELIPLEEVIFFIADHKYVTLRHAQG-EVLL 179 Query: 176 ELTLRTLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILR--NGLTVPVSRRYLK 231 + L+ LE +R HR LV ++ ++ G +L L+ +G + VSRR++ Sbjct: 180 DEPLKALEDEFGERFVRIHRNALVARERIERLQRTPLGHFQLYLKGLDGDALTVSRRHVA 239 Query: 232 SLKEAI 237 ++ + Sbjct: 240 GVRRLM 245 >UniRef50_Q9KL96 Uncharacterized response regulatory protein VC_A0850 n=25 Tax=Vibrio RepID=Y0G0_VIBCH Length = 261 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 70/260 (26%), Positives = 123/260 (47%), Gaps = 27/260 (10%) Query: 1 MIK----VLIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDI 55 M+ ++ DDEPL R +L L E +EIV N + A+ + +PDV+FLDI Sbjct: 1 MMNQTYTAVLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDI 60 Query: 56 QMPRISGLEMVGMLDPEHR-PYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLAR 114 +MP++ G+E+ L + + P +VF+TA+DEYA+ AFE HA DYLLKP+ +RL + Sbjct: 61 RMPKMDGIEVARRLLQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEK 120 Query: 115 LRQERSKQDVS--------------LLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRM 160 L+Q+ + Q ++ + I+L+ + ++ +V + Sbjct: 121 LQQQLRRNVAPSNDLAQLMSQFEQLTRTVKPQYQVWLKASKGEEIHLIAVNELLYVKAED 180 Query: 161 SGV---YVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAE 214 + V E +L+ L ++ + HR +VN+ + ++ + G+ Sbjct: 181 KYLSLYKVHGATTHEYLLRSSLKELLAQLDPNQFWQIHRSIVVNVGKIDKVTRDFGGKMW 240 Query: 215 LILRNGLTVPVSRRYLKSLK 234 + + L +PVSR K Sbjct: 241 VH-IDRLQLPVSRALQHLFK 259 >UniRef50_D0HCT2 Response regulator n=5 Tax=Vibrio RepID=D0HCT2_VIBMI Length = 261 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 70/261 (26%), Positives = 123/261 (47%), Gaps = 27/261 (10%) Query: 1 MI----KVLIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDI 55 M+ K +I DDEPL R +L L + +E+V N + A+ +PD++FLDI Sbjct: 1 MMNQCVKAVIADDEPLLRHHLNKMLADLWPALEVVASAENGEVALQAIEHHQPDLVFLDI 60 Query: 56 QMPRISGLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLAR 114 +MP++ G+ + L P +VF+TA+DEYA+ AFE +A DYLLKP+ +RL + Sbjct: 61 RMPKLDGMAVARRLLTLPKIPLVVFITAYDEYAVSAFEANAIDYLLKPLSLSRLASCCEK 120 Query: 115 LRQERSKQDVSLL--------------PENQQALKFIPCTGHSRIYLLQMKDVAFVSSRM 160 L+Q+ + Q ++ + I+LL + DV +V + Sbjct: 121 LQQQLQRNASPTADLTQLLSQFEQLTRSTKPQYQVWLKASKGEEIHLLAVSDVLYVKAED 180 Query: 161 SGVYVTSHEG---KEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAE 214 + + +G +E +L+ L ++ + HR VN+A + ++ + G+ Sbjct: 181 KYLSLYKTQGSVTQEYLLRSSLKELLAQLDPNQFWQIHRAVAVNVAKIDKVTRDLTGRMW 240 Query: 215 LILRNGLTVPVSRRYLKSLKE 235 + + + +PVSR K Sbjct: 241 VH-IDRVQLPVSRALQHLFKA 260 >UniRef50_C6PV14 Two component transcriptional regulator, LytTR family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PV14_9CLOT Length = 256 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 78/254 (30%), Positives = 139/254 (54%), Gaps = 17/254 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IK +I++DE A E L+ L + I++VG + + G+ + +P+ F+DI MP + Sbjct: 4 IKCVILEDEIPAAEELKYILSQHELIDVVGIGYDGMSGLELIKNKKPEAAFMDINMPLQN 63 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+E+ + + I+F+TA++E+A++AFE +A DY+LKP DE R+E T+ RL + Sbjct: 64 GMELAKKVREFDENIDIIFVTAYEEHAVQAFEVNALDYILKPFDEKRIEITIKRLASKFK 123 Query: 121 KQDVSLLP-------------ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTS 167 + + + ++ +K IPC + +I L+ +KD+ + + YV + Sbjct: 124 NKTIDEEKLPDIINDIINKIDKEERIVKKIPCEKNGKIVLVNIKDIYYCYIKDEKTYVKA 183 Query: 168 HEGKEGFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG--LTVPV 225 G TL+ +E +T R HR YLVN+ +++E+ NG +L++ + +P+ Sbjct: 184 KYG-TYLVGFTLQQIEGKTDFFRAHRSYLVNMDNIKELYSWFNGTYKLVMDDNNRSEIPI 242 Query: 226 SRRYLKSLKEAIGL 239 SR +K LKE IG+ Sbjct: 243 SRNNVKRLKEIIGI 256 >UniRef50_C6I7A6 Two-component system response regulator n=13 Tax=Bacteroides RepID=C6I7A6_9BACE Length = 245 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 69/246 (28%), Positives = 118/246 (47%), Gaps = 15/246 (6%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MIK + VDDEPLA E L ++ ++++ C +A + + + D++F+DI MP + Sbjct: 1 MIKCIAVDDEPLALEQLTGYIARVPFLQLIASCQDAFSAMQVLSEEEVDLMFVDIHMPDL 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +GL++V L +P IVF TA+ EYA++ F+ A DYLLKP + L K + R++ Sbjct: 61 NGLDLVRSL--VVKPLIVFTTAYPEYAVEGFKVDAVDYLLKPFEFQDLLKAADKARRQFE 118 Query: 121 KQDVSLLPENQ----QALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTS-HEGKEGFT 175 + + + +I + + D+ ++ V + + K T Sbjct: 119 YHLQDNGGGTETDLLEKDGSLFVKSEYKIIRINVADICYIEGMSEYVRIYTDAADKPVVT 178 Query: 176 ELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKS 232 L++R LE R P +R HR Y+VNL + E+ + +I + +PV Y + Sbjct: 179 LLSMRKLEERLPQEMFMRVHRSYIVNLRKITEV-----SRLRIIFNKNIYIPVGDNYKER 233 Query: 233 LKEAIG 238 E I Sbjct: 234 FTEYIN 239 >UniRef50_B8KBX1 Transcriptional regulator n=4 Tax=Vibrio RepID=B8KBX1_VIBPA Length = 263 Score = 236 bits (604), Expect = 4e-61, Method: Composition-based stats. Identities = 70/255 (27%), Positives = 125/255 (49%), Gaps = 24/255 (9%) Query: 2 IKVLIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 + +I DDEPL R +L L + ++EI G N + + + +P + FLDI+MP+ Sbjct: 6 LTAIIADDEPLLRFHLDKALADVWPELEIKGLAENGEQALELIEAHQPTIAFLDIRMPKC 65 Query: 61 SGLEMVGMLDPEHR-PYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 G++ L + +VF+TA+DEYA++AFE +A DYLLKP+ E RLE+ + RL+Q+ Sbjct: 66 DGMQAAKRLMENNSATTVVFVTAYDEYAVQAFENNAADYLLKPLSETRLEQCVTRLKQKF 125 Query: 120 SKQDVSLLP---------------ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVY 164 S + P + L +I + I+L+ + +V + + V Sbjct: 126 SVDATAQAPDMQALFQQMQQLAEQKTPNYLSWIRASKGEDIHLISVSEVLYFKAEDKYVS 185 Query: 165 VTSHEGK---EGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILR 218 + E E +L+ L ++ + HR +VN++ ++ ++ E G+ +++ Sbjct: 186 LFQQEQNKTVEYVLRTSLKELLTQLDPDQFWQIHRSTIVNVSAIERVKKEFTGKM-VVIV 244 Query: 219 NGLTVPVSRRYLKSL 233 G +PVSR Sbjct: 245 GGEKLPVSRAMQAKF 259 >UniRef50_Q0K6B3 Response regulator containing a LytTR DNA-binding domain n=2 Tax=Cupriavidus RepID=Q0K6B3_RALEH Length = 253 Score = 236 bits (604), Expect = 4e-61, Method: Composition-based stats. Identities = 75/253 (29%), Positives = 128/253 (50%), Gaps = 22/253 (8%) Query: 3 KVLIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 LI DDE R LR LQ +++IV E +N +E A+ +L P V FLDI+MP +S Sbjct: 4 TALIADDEEHLRAYLRSKLQRHWPELQIVAEATNGIEAADAIARLSPSVAFLDIKMPGLS 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GLE+ ++ + R +VF+TA+DE+A+ AFE A DYL+KP+ E RL +T+ RLR+ + Sbjct: 64 GLEVAQGIETDTR--LVFVTAYDEFALDAFERAAVDYLVKPVSEERLGRTIERLRKALQE 121 Query: 122 QDV--------------SLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTS 167 E+ L+++ + + + +++V + S V V + Sbjct: 122 AAPLPELAQLLSQLTRAQPRAESGGQLRWVRASRGNTTSHVPIQEVMYFQSDDKYVVVHT 181 Query: 168 HEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL-TV 223 +G E L L + + HR +VN+ ++ R ++ G+ + +R+ + Sbjct: 182 RDG-EHLIRTPLAELIAGLDPEVFWQIHRSSIVNMEYVAGTRRDEAGRLFVRMRDSEAEL 240 Query: 224 PVSRRYLKSLKEA 236 PVSR Y+ ++ Sbjct: 241 PVSRAYMHRFRQM 253 >UniRef50_Q02A01 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02A01_SOLUE Length = 255 Score = 236 bits (604), Expect = 4e-61, Method: Composition-based stats. Identities = 82/249 (32%), Positives = 134/249 (53%), Gaps = 14/249 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I LIVDDEP+AR LR L+ IEI GE +N E + + LRP+++FLD+QMP ++ Sbjct: 6 ITTLIVDDEPVARRVLREGLESIPGIEIAGEAANGREALDKIAALRPELVFLDLQMPVMT 65 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E+V LD P IV +TAFD++A++AFE A DYLLKP+ EARL++ + R ++ Sbjct: 66 GFEVVRRLDGPPLPVIVIVTAFDQHALQAFEAGAIDYLLKPVTEARLQRAVERAAVLLNR 125 Query: 122 Q----------DVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGK 171 PE+ ++ + S LL +V + V++ + + + Sbjct: 126 PIEIANHVASLASVTTPEHPNKIRKVVGRSGSDYVLLDADEVLAFQAERELVWIITAK-Q 184 Query: 172 EGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRR 228 F +L+T+E R R HR +VN+ H++++ + + + L NGL + VS+R Sbjct: 185 RLFATQSLKTIEERLVGPQFQRVHRNAIVNVDHVRKLTALSSQRWYMTLSNGLQLVVSKR 244 Query: 229 YLKSLKEAI 237 +++ + Sbjct: 245 QAHKIRDLL 253 >UniRef50_UPI0001C42EF9 two-component response regulator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42EF9 Length = 244 Score = 236 bits (603), Expect = 6e-61, Method: Composition-based stats. Identities = 78/243 (32%), Positives = 133/243 (54%), Gaps = 7/243 (2%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IK +I+DDEP +R+ L L E DIE++ C++A G+ ++ PD++FLDI MP+I+ Sbjct: 4 IKTMIIDDEPHSRDELSHLLSEHKDIEVIDRCTDAQSGLVSIMNKEPDLVFLDIDMPKIN 63 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GLE+ L+ + +P ++F TA ++YA KAF AFDYLLKP DE L + L+R R + Sbjct: 64 GLELASSLNKLKKKPKVIFATAHEQYAAKAFRVQAFDYLLKPFDEEELSEALSRYRDQMD 123 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 ++ S + + L + + I + + +++ + + E KE L+ Sbjct: 124 DKE-SDERKIESRLTRLAVEDNEEISYIDPNTIIYMAREERDTVIRTRE-KEYRLRTPLK 181 Query: 181 TLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKSLKEA 236 L+ + P ++ H+ YLVN A + + NG ++ L+ +P SR Y+++L+E Sbjct: 182 DLKQKLAGYPFVQTHKSYLVNAAEIAGLIPWFNGAYQIKLKGVKEEIPASRTYVRALREQ 241 Query: 237 IGL 239 L Sbjct: 242 FEL 244 >UniRef50_B2I5K9 Two component transcriptional regulator, LytTR family n=16 Tax=Xanthomonadaceae RepID=B2I5K9_XYLF2 Length = 252 Score = 236 bits (603), Expect = 6e-61, Method: Composition-based stats. Identities = 77/245 (31%), Positives = 127/245 (51%), Gaps = 7/245 (2%) Query: 1 MIKVLIVDDEPLARENLRVFLQ-EQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 M+++LI DDEPLARE LRV LQ + +E+V E N + + +L PD++ +DI MP Sbjct: 1 MLRILIADDEPLARERLRVLLQAQMQHLEVVAEAENGEQVLHDCQRLNPDLVLMDIAMPG 60 Query: 60 ISGLEMVGMLD-PEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE 118 I GLE L P +VF TA+ ++A+ AF+ A DYL+KP+ RL L R++ Sbjct: 61 IDGLETARYLRYLPACPAVVFCTAYGDHALSAFDVEAIDYLMKPVRAERLHAALKRVQTF 120 Query: 119 RSKQDVSLLPE-NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL 177 + + ++ + + L+ + V ++ + V + +G++ E Sbjct: 121 VAGRLREPQTSCDETPRTHLCVRIRGGLRLIPLDQVRYLQADEKYVVICHEQGED-LIEE 179 Query: 178 TLRTLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKSLK 234 +L++LE +R HR L+ A L E+R +GQ + +LRN + VSRR + L Sbjct: 180 SLKSLEKEFSDRFVRIHRNCLIARAELTELRRCSDGQVQAVLRNVVTPLAVSRRCVPLLC 239 Query: 235 EAIGL 239 + + L Sbjct: 240 DQLRL 244 >UniRef50_C1ABW9 Two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1ABW9_GEMAT Length = 276 Score = 236 bits (603), Expect = 6e-61, Method: Composition-based stats. Identities = 72/263 (27%), Positives = 128/263 (48%), Gaps = 36/263 (13%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++V+I +DEPL R +LR L ++D+++VGE VE + +PDV+ LDI+MP Sbjct: 6 LRVVIAEDEPLPRASLRRLLAARADVDVVGEAEQGVEAQALIESCKPDVVILDIRMPERD 65 Query: 62 GLEMVGML--DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 G+E+ + + + P IVF+TAFDEYA++AF+ HA DYLLKPID L++ LAR+ Sbjct: 66 GIEVAASVLANLDEPPAIVFVTAFDEYAVRAFDLHAVDYLLKPIDAEHLDRALARVFARI 125 Query: 120 SKQDVS-----------------------------LLPENQQALKFIPCTG-HSRIYLLQ 149 Q + L + + Y ++ Sbjct: 126 VAQRSTGTSDGTSDGTSASTSTAARLDPALLTVLEELRIERALPQRFAVRDAKGGTYWVK 185 Query: 150 MKDVAFVSSRMSGVYVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIR 206 D+ +V ++ + V + +G++ T++ + + +R HR +VN+ +Q + Sbjct: 186 SADIDWVDAQSNYVRLH-AKGQQHLVRDTMKAFQQKLSATRFVRIHRSVIVNIDFIQRVE 244 Query: 207 LEDNGQAELILRNGLTVPVSRRY 229 +G+ + LR+G + S+ + Sbjct: 245 PHLHGEQIVTLRDGTRLRTSKSH 267 >UniRef50_A4C6V8 Two-component system, regulatory protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C6V8_9GAMM Length = 240 Score = 236 bits (602), Expect = 6e-61, Method: Composition-based stats. Identities = 70/239 (29%), Positives = 119/239 (49%), Gaps = 9/239 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IKV+IVDDE LAR L+ L + S IEI+ E NA E + + +PD +FLDI MP ++ Sbjct: 3 IKVIIVDDERLARNELKRLLAKHSQIEIIDEAKNADEAKEKIAEQKPDAIFLDIHMPGVT 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GLE+ L + I+F TA+D++A+ AF +A DYL+KP++ RL +++A+L + + Sbjct: 63 GLELAETLGDDVN--IIFCTAYDQFAVDAFSLNAMDYLVKPVNPERLAESIAKLEKRVEQ 120 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 + + ++ ++Q+ ++ S + + + GK +L Sbjct: 121 AKE---KTSLPDDHKLMVKYGEKMRIIQLCEIIRFESIGNHAAIYTPHGKAYL-HSSLNK 176 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 +E + R R +V L + + L NG T+ +SRR LK+ + Sbjct: 177 IEKKLDEANYFRASRSDIVRLDAITSMEQSIGYGLLATLTNGQTIEISRRQATKLKQLL 235 >UniRef50_B9DL71 Two-component response regulator n=2 Tax=Staphylococcus RepID=B9DL71_STACT Length = 266 Score = 236 bits (602), Expect = 6e-61, Method: Composition-based stats. Identities = 80/266 (30%), Positives = 121/266 (45%), Gaps = 29/266 (10%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K LIVDDEPLAR L L + + E++ E E + + DV+FLDI + S Sbjct: 1 MKTLIVDDEPLARNELNYLLTQNGNFEVIDEAETIGETLEKLLYETYDVIFLDINLMDES 60 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GL++ + +H PYI+F TA D +A+KAFE A DY+LKP ++ R+ + + R+ + + Sbjct: 61 GLDLAEKIQKMKHPPYIIFATAHDTFAVKAFELDATDYILKPFEQDRINQAVTRVAAKLN 120 Query: 121 KQDVSLLPENQQALKF------------------------IPCTGHSRIYLLQMKDVAFV 156 S + +P RIY+L K++ + Sbjct: 121 YSSSSNQQTTEPQESSEKVGETVRQNQFKPSEHSIKQPSVLPIEVDERIYVLNQKEIIAL 180 Query: 157 SSRMSGVYVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQA 213 S + + ++ T L R LR HR ++N AH+Q I N Sbjct: 181 SVNNGKTTLHTLN-RDYETTEPLNNYAKRLDDTQFLRIHRSTIINQAHIQTIEHWFNYTY 239 Query: 214 ELILRNGLTVPVSRRYLKSLKEAIGL 239 ++ L L V VSR Y+K K AIGL Sbjct: 240 QVTLTGNLKVQVSRSYMKPFKAAIGL 265 >UniRef50_Q01YJ9 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01YJ9_SOLUE Length = 252 Score = 236 bits (602), Expect = 7e-61, Method: Composition-based stats. Identities = 74/250 (29%), Positives = 124/250 (49%), Gaps = 18/250 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +KVLIVDDEPLARE +++ L S +V E N E + + + +PD++ LD+QMPR+ Sbjct: 3 LKVLIVDDEPLAREGIKLMLGGDS---LVMEARNGREAVTKIREEKPDLVLLDVQMPRMD 59 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR----- 116 G +V + + P ++F+TA D+YA++AFE A DYLLKP+ E R AR R Sbjct: 60 GFGVVEAVGADKMPAVIFITAHDQYAVRAFEISAVDYLLKPVTEERFRTAFARARNRLRA 119 Query: 117 ------QERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEG 170 + + + +Q L + L + +V ++ + + V V Sbjct: 120 APGDESARQMLAVLDAIANPRQYLSRLAVRSGEGTLFLTIDEVEWIEAAQNYVCVH-AGQ 178 Query: 171 KEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSR 227 + + + T+E+ +R HR Y+VNL H++ + + Q L L +G +P R Sbjct: 179 TKHLLHVAMNTMENSLDPERFVRIHRSYIVNLQHIKRLWTLPHRQYILELASGERLPSGR 238 Query: 228 RYLKSLKEAI 237 Y + ++ Sbjct: 239 TYGEKIRTLF 248 >UniRef50_Q0QJA1 Putative response regulator n=1 Tax=Pseudoalteromonas sp. BB1 RepID=Q0QJA1_9GAMM Length = 266 Score = 236 bits (602), Expect = 7e-61, Method: Composition-based stats. Identities = 78/262 (29%), Positives = 132/262 (50%), Gaps = 27/262 (10%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K L+VDDE A E LR+ L+ +I ++G ++ E I +++ D++FLDI+MP S Sbjct: 4 LKTLLVDDEYSATEGLRIRLEAFPEINVIGSAASVDEAIQLLNQFDVDLIFLDIEMPTKS 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E++ PE P ++F+TAF ++A++AFE A DYLLKP+ ARL + + R+ Sbjct: 64 GFELIKHFQPESCPAVIFVTAFHQHAVQAFEVRALDYLLKPVKLARLAEAIERVVTTERL 123 Query: 122 QDVSLLPENQQALKF----------------------IPCTGHSR-IYLLQMKDVAFVSS 158 Q + L E Q+L + I ++ KD+ ++ + Sbjct: 124 QRKTALIEVHQSLIKDATDSQEVGAAGNSEYKFEAENLVIQDAKNPIQIIPFKDILWIDA 183 Query: 159 RMSGVYVTSHEGKEGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAEL 215 + V + + L+ LE T LR H+ +VNL+H++++ N + Sbjct: 184 AGDYMCVHTP-AETHVMRARLKELEKNTLPEDFLRIHKSTIVNLSHIKQLNPLRNSEYMA 242 Query: 216 ILRNGLTVPVSRRYLKSLKEAI 237 +L++G T+ VSR Y K+LK Sbjct: 243 VLQSGKTLKVSRTYSKNLKSLF 264 >UniRef50_A3WHL3 Two-component response regulator n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WHL3_9SPHN Length = 260 Score = 235 bits (601), Expect = 8e-61, Method: Composition-based stats. Identities = 68/258 (26%), Positives = 125/258 (48%), Gaps = 21/258 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++V I DDEPLA + ++ D EIVG S+ E + + RPD+L LDI MP ++ Sbjct: 4 LRVFIADDEPLALRRVLRSVKSVDDTEIVGTASDGKEALAVIAATRPDLLLLDIMMPGLT 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E++ LD + P ++F+TAFD +A+ AF + DY+LKP+D+ RL + + R R+ Sbjct: 64 GFELLEHLDEDQTPSVIFITAFDNFAVDAFAQGVVDYILKPLDDTRLAQAIERARERMEL 123 Query: 122 QDVSLLPEN-----------------QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVY 164 + I + + ++++D+ ++ + V Sbjct: 124 DANQERFAQLRSALSQMNTDFSTAIPSPYERDIWVRENGVVRRVRVEDIDWIEAANDYVS 183 Query: 165 VTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL 221 + + G+ + ++R+L R + HR +V + + EI E L L++G Sbjct: 184 LHTAGGQ-YLADDSIRSLAKRLNPDQFFQVHRGAIVRIQAISEINREKFSAISLTLKSGA 242 Query: 222 TVPVSRRYLKSLKEAIGL 239 V VS+ + +++ +A+ L Sbjct: 243 RVRVSKSFKRAVFDALKL 260 >UniRef50_A8MGZ3 Two component transcriptional regulator, LytTR family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MGZ3_ALKOO Length = 246 Score = 235 bits (601), Expect = 8e-61, Method: Composition-based stats. Identities = 75/245 (30%), Positives = 133/245 (54%), Gaps = 8/245 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I +I+DDE L+ E L L + IEIVG+ ++G+ + L+PD+ F+D++MP IS Sbjct: 3 ITAVIIDDEYLSIEELSFLLSKIHFIEIVGKAECGLDGLDLIRNLKPDLAFVDVKMPDIS 62 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+++V ++ + I+F TA+D+YAI+AF A DY+LKP +E R+ K+L + R+ Sbjct: 63 GIQLVKKINELDIHCKIIFTTAYDKYAIEAFNVDAIDYILKPYEEKRVIKSLLKAREIIE 122 Query: 121 K--QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELT 178 + + LP A + R+ L+ KD+ + + +++ + + + + + Sbjct: 123 NTAKQHTELPPVNIAFNKLSALKDDRLILIDTKDILLIYTEDRNIFIKTKK-EIFSSSYS 181 Query: 179 LRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKSLK 234 ++ LE R R HR YLVNL ++E+ NG +L +P+SR ++K K Sbjct: 182 MQELEERLSKDGFFRTHRSYLVNLNKIKEVSPWFNGSYIAVLDGINDEIPISRNHVKEFK 241 Query: 235 EAIGL 239 +G+ Sbjct: 242 RILGI 246 >UniRef50_Q7P589 Two-component response regulator n=15 Tax=Fusobacterium RepID=Q7P589_FUSNV Length = 245 Score = 235 bits (601), Expect = 9e-61, Method: Composition-based stats. Identities = 79/242 (32%), Positives = 133/242 (54%), Gaps = 9/242 (3%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI +IV+DE ARE L+ FL E+ +I+++ E N ++ + + DV+FLDI MP + Sbjct: 6 MINCIIVEDELPAREELKYFLNEEKEIKLIAEFDNPLDTLNFLENNTADVIFLDINMPDM 65 Query: 61 SGLEMVGMLDPEHR-PYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +G+ + ++ + I+F+TA+ +YA+ AFE AFDYLLKP E+R++ L L + Sbjct: 66 NGISLGKIITKMYPDMKIIFITAYKDYAVDAFEIKAFDYLLKPYSESRIKSLLKSLVNIK 125 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 S+ S+ N LK I R+Y++ + DV ++ + + S++ K+ +++ + Sbjct: 126 SEVTTSIKNTN---LKKITVNIDERLYVISLTDVDYIEASEKETLIFSNQ-KKYISKIKI 181 Query: 180 RTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT-VPVSRRYLKSLKE 235 E RCHR ++VNL + EI N + ++N T +PVSR +K LKE Sbjct: 182 SKWEEMLKGDNFYRCHRSFIVNLDKITEIEQWFNSSWIIKIKNYTTAIPVSRNNIKELKE 241 Query: 236 AI 237 Sbjct: 242 LF 243 >UniRef50_C6W927 Two component transcriptional regulator, LytTR family n=19 Tax=Actinomycetales RepID=C6W927_ACTMD Length = 281 Score = 235 bits (601), Expect = 9e-61, Method: Composition-based stats. Identities = 76/254 (29%), Positives = 124/254 (48%), Gaps = 21/254 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHK-----LRPDVLFLDIQ 56 ++VL VDDEP A E+L L+ + V +A + + +H+ D +FLDI+ Sbjct: 23 LRVLAVDDEPPALEDLVYLLRSDPRVGHVEAVGDATKALRTLHRAMDAGQPVDAVFLDIR 82 Query: 57 MPRISGLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL 115 MP + GL++ +L P IVF+TA E A++AFE A DYLLKP+ + RL +++ R+ Sbjct: 83 MPGLDGLDLARVLSRFAQPPPIVFVTAHQEPAVEAFELKALDYLLKPVRQERLAESVHRI 142 Query: 116 RQERSKQDVSLLPENQQA---------LKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT 166 E + P Q A + IP +++ ++ +V + + Sbjct: 143 VHEVLESRPVEQPAPQAAPVERAPDVGDEVIPVELGGITRFIRLAEIRYVEAHGDYARLH 202 Query: 167 SHEGKEGFTELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTV 223 + G L LE R +R HR +LV+L H+ E+RLED + G + Sbjct: 203 TATGSG-LVRAALNGLEERWRSAGFVRIHRSHLVSLGHIDELRLEDG--HLSVNIGGAVL 259 Query: 224 PVSRRYLKSLKEAI 237 PVSRR+ + L++ + Sbjct: 260 PVSRRHARHLRQLL 273 >UniRef50_A1HSX1 Response regulator receiver protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSX1_9FIRM Length = 269 Score = 235 bits (601), Expect = 9e-61, Method: Composition-based stats. Identities = 74/243 (30%), Positives = 125/243 (51%), Gaps = 11/243 (4%) Query: 3 KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 K +I+DDE + + L++ DI++ + +N +E + + + D++F DI+MP +SG Sbjct: 31 KTVIIDDEQPICDEIEYLLKQHIDIDVAAKFTNPLEALEYISEQGCDLVFADIKMPGMSG 90 Query: 63 LEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 LE+ L P +VF+TAF E+A++AF+ A Y+ KPI E +L + ++++R + Sbjct: 91 LELARRLSVLRATPLVVFITAFQEHALEAFDTPAVGYITKPIMEDKLARLMSKVRCLIER 150 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 + P + I T +I L ++ + V+V + E LTL+ Sbjct: 151 TYQAGRPA----VSKICVTTGGKIIPLDKNEIVLAYVKDKDVFVRTKT-SEYMATLTLQE 205 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN--GLTVPVSRRYLKSLKEA 236 +E+ LR HRQY+VNL ++EI +G L + + VPVSR K LK Sbjct: 206 IENILDGSNFLRVHRQYIVNLDMVREIIPWFHGSYLLRMDDCRQEEVPVSRARTKVLKNI 265 Query: 237 IGL 239 +GL Sbjct: 266 LGL 268 >UniRef50_B8JGA2 Two component transcriptional regulator, LytTR family n=5 Tax=Proteobacteria RepID=B8JGA2_ANAD2 Length = 239 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 105/242 (43%), Positives = 145/242 (59%), Gaps = 6/242 (2%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M++ +IVDDEP AR LR LQ ++EI +C NAVE + AV + RPDVLFLD+QMP + Sbjct: 1 MMRAVIVDDEPNARAELRALLQATGEVEIAADCGNAVEALQAVRRERPDVLFLDVQMPVV 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G E++GMLDP+ P +VF+TA D +A++AFEE A DYLLKP+ + R Sbjct: 61 DGFELLGMLDPDDLPAVVFVTAHDAFALRAFEESAADYLLKPVAPD--RLRRSLERLRAR 118 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 P L +PC + L+ + ++ V S +GV+V + +G E FTELTL+ Sbjct: 119 AGVARAAPPLAPPLTRVPCLAGRAVKLVPLAEIELVRSGPAGVHVVTAQG-ELFTELTLK 177 Query: 181 TLESRTPLLRCHRQYLVNLAHLQEIRLEDN---GQAELILRNGLTVPVSRRYLKSLKEAI 237 LE R LLRCH+Q+LVN + EIR D G A + R G VPVSRR+L ++ + Sbjct: 178 VLEERGGLLRCHKQHLVNADRVDEIRPGDASDPGAAVIRTRGGHDVPVSRRHLAQVRARL 237 Query: 238 GL 239 G+ Sbjct: 238 GI 239 >UniRef50_A0M3D4 Two-component response regulator containing LytTR DNA-binding domain n=4 Tax=Bacteroidetes RepID=A0M3D4_GRAFK Length = 237 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 68/240 (28%), Positives = 126/240 (52%), Gaps = 13/240 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ +IVDDE +A + + L + +IE+VG C NA E + + D++FLDI MP IS Sbjct: 5 IRCVIVDDENVALDIMENHLSKIDNIELVGRCKNATEAFNMISSNKTDLVFLDINMPGIS 64 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+ ++ I+F TA+ EYAI F+ HA DYLLKPI RL + ++ Sbjct: 65 GISFAKSINKN--IKIIFTTAYREYAIDGFDLHAVDYLLKPISFDRLLDAVHNFQEVHLD 122 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 Q+ L +N+++ FI +++ + + ++ S + + + EG + T T+ + Sbjct: 123 QN-DLEVQNKKSGDFIFVKIDRKMHKIDFSGILWIESLSDYLKIETSEGTK-VTRETISS 180 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIG 238 +E++ P LR HR +++ + +++ E+ ++ ++P+SR Y + + +G Sbjct: 181 IETKLPETKFLRVHRSFIIAIDYIESYSNEE------VVIQNKSIPISRTYKDEVLKCLG 234 >UniRef50_A5F9U3 Two component transcriptional regulator, LytTR family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5F9U3_FLAJ1 Length = 237 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 63/237 (26%), Positives = 114/237 (48%), Gaps = 15/237 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K L++DDEP+AR + F+ + +E G C++A+E + + + D++FLDI MP ++ Sbjct: 3 MKCLVIDDEPIARNGIVDFISKIDFLEAAGTCASALEATSYLQEKQIDLMFLDINMPYLT 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GLE + L ++ P ++F TA+ E+A+ + DYLLKPI R + + RQ Sbjct: 63 GLEFLEAL--DNPPLVIFTTAYSEHALDGYRLQVVDYLLKPITFQRFYQASLKARQWHQM 120 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 P+ Q F+ + D+ ++ + + E K T+ + Sbjct: 121 MHA---PKQNQLDPFLYVRQEEGFQKISWVDILYIEGMQNYAKLHFKE-KVIVIHQTMIS 176 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKE 235 LE P R H+ +LVN+ H+ + G+ + G +P+SR ++L + Sbjct: 177 LEETLPAEIFFRIHKSFLVNITHIDSV---SGGRLFIK---GQELPISRTRREALLK 227 >UniRef50_Q15WR3 Response regulator receiver protein n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15WR3_PSEA6 Length = 239 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 68/242 (28%), Positives = 115/242 (47%), Gaps = 9/242 (3%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M + +++DDE LARE + ++ E+V E S+ + + +PD+ FL IQ+ Sbjct: 1 MYRCVVIDDEALARERIAQYISRSPLCEVVAEASSFENAKQLILEQQPDICFLGIQIIGG 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SG+E+ L + VF TA EYAI AFE A DYLLKP ++RL + +A++ ++ Sbjct: 61 SGVELAKELHNSVSCHWVFTTAHSEYAIAAFELEATDYLLKPFQDSRLAQVIAKIHRKHQ 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + + + +P + + +D+ +V + V + EGK TL Sbjct: 121 S-----ITPKYETRRQLPIRSVGSVKFINTQDIIWVKGSANYVELYC-EGKMHLHRETLS 174 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 L +R HR +VN+ ++ + E + L L NG V + + Y L A+ Sbjct: 175 ALAQTLDPTQFIRVHRSAIVNIDYVHSLNSELGRFSLLQLDNGDEVKIGQSYKAQLLSAL 234 Query: 238 GL 239 G+ Sbjct: 235 GV 236 >UniRef50_A3M1E2 Alginate biosynthesis regulatory protein n=20 Tax=Moraxellaceae RepID=A3M1E2_ACIBT Length = 246 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 82/245 (33%), Positives = 126/245 (51%), Gaps = 11/245 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +KVLI DDEPLA E L + + E+V + + + PDV+ LDIQMP ++ Sbjct: 1 MKVLICDDEPLAVERLSRLVSKMGH-EVVATAHHGQDALEQARLHHPDVILLDIQMPGMN 59 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GL L RP IVF TA+D++A++AF+ A YLLKPID LE+T +L Q Sbjct: 60 GLVCAEQLSQLNPRPAIVFCTAYDQHALEAFKSQAQAYLLKPIDPQELEQTFKQLTQLTQ 119 Query: 121 KQ-----DVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFT 175 Q LL + + I + + L+ ++++ + + V V G Sbjct: 120 AQLSALPKPELLQDLKTQRHQIAAKTYRGVELIPVENIYYFLADQKYVTVRHKNG-SVLI 178 Query: 176 ELTLRTLESR--TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKS 232 + TL+ LE+ +R HR LV++A+L + L +GQ ++ LR + VSRR+L + Sbjct: 179 DETLKELETEFADQFIRIHRNALVSIAYLDGLELVSSGQYQVRLRGLDERLSVSRRHLST 238 Query: 233 LKEAI 237 L+E I Sbjct: 239 LRERI 243 >UniRef50_A5FJA4 Two component transcriptional regulator, LytTR family n=2 Tax=Flavobacteriales RepID=A5FJA4_FLAJ1 Length = 238 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 69/246 (28%), Positives = 124/246 (50%), Gaps = 16/246 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K +I+DDEPLA E L F+++ +E+V +NA++ + +++ D++FLDIQMP S Sbjct: 1 MKCVIIDDEPLAVELLEDFVKKVDSLELVNTFNNAIDAVSFINQNNIDLIFLDIQMPHFS 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+E + + E +P ++F TA+ +YA++ F A DYL+KPI R K++ R +Q + Sbjct: 61 GIEFINTI--EKKPLVIFTTAYSDYAVEGFNLGAVDYLVKPIPFHRFLKSVVRAQQINNP 118 Query: 122 QDV-----SLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTE 176 +P + F+ + D+ F+ V + + + K T Sbjct: 119 AAPVQAVSENVPAPEVEQDFMFVRAEYENVKMNFSDILFIEGLKDYVKIYTTDNKFTLTL 178 Query: 177 LTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSL 233 ++L LE+ R HR Y++N+ H++ I+ +L + +P+S Y + Sbjct: 179 ISLIKLENLLSNKGFSRIHRSYIINIKHVKSIQKNK------VLISDKRIPISESYKNAF 232 Query: 234 KEAIGL 239 E I L Sbjct: 233 FEKINL 238 >UniRef50_D0IHA7 Response regulator n=1 Tax=Vibrio sp. RC586 RepID=D0IHA7_9VIBR Length = 266 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 74/252 (29%), Positives = 125/252 (49%), Gaps = 22/252 (8%) Query: 4 VLIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 +I DDEPL R +L L + +EIV N + A+ + +P+V+FLDI+MP++ G Sbjct: 14 AVIADDEPLLRHHLNKMLADVWPALEIVANAENGEVALQAIEQHQPNVVFLDIRMPKMDG 73 Query: 63 LEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 LE+ L RP +VF+TA+DEYA+ AF+ +A DYLLKPI +RL RL+Q+ + Sbjct: 74 LEVARSLLQLPKRPLVVFITAYDEYALSAFDANAIDYLLKPISLSRLIDCCERLQQQLQR 133 Query: 122 QDVSL-------------LPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSH 168 + ++ + I+LL + DV +V + + + + Sbjct: 134 AAPTADLAQLFSQFEQLTRNVKPDYQVWLKASKGEDIHLLAVSDVLYVKAEDKYLSLYKN 193 Query: 169 EG---KEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT 222 +G +E +L+ L S+ + HR VN+A + ++ + NG+ + + + Sbjct: 194 DGVLAQEYLLRTSLKELLSQLDPNQFWQIHRSLAVNVAKIDKVTRDLNGKMWVH-IDRIQ 252 Query: 223 VPVSRRYLKSLK 234 +PVSR K Sbjct: 253 LPVSRALQHLFK 264 >UniRef50_Q4L8V4 Sensory transduction protein lytR n=60 Tax=Bacilli RepID=LYTR_STAHJ Length = 256 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 121/256 (47%), Gaps = 19/256 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K LIVDDEPLAR L L E S ++ E N E + + D++FLDI + S Sbjct: 1 MKTLIVDDEPLARNELHYLLNEISGFNVIDEAENIEETLEKLLSETYDLVFLDINLMDES 60 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+++ + + P+I+F TA D +A+KAFE A DY+LKP + R+E+ + +++ + S Sbjct: 61 GIDLAQKIKKMKQPPHIIFATAHDTFAVKAFELDAIDYILKPFELERIEQAVNKVKHQIS 120 Query: 121 KQD--------------VSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT 166 + + + +P + RIY+++ D+ VS + Sbjct: 121 NSNEIDHITSEPSTLSMQQDDRQENEDQTVLPIEMNERIYVIRKDDITAVSVNNGITTIN 180 Query: 167 SHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTV 223 + + T L E + ++ HR ++N H+ + N ++ + +G Sbjct: 181 TTH-RTYQTNEPLNYYEKKLSNNTFIKIHRATIINKTHIDSVEHWFNYTYQVTMTSGDKF 239 Query: 224 PVSRRYLKSLKEAIGL 239 VSR ++K+ K IGL Sbjct: 240 QVSRSFMKAFKHEIGL 255 >UniRef50_A7GIP3 DNA-binding response regulator, LytTr family n=12 Tax=Clostridium RepID=A7GIP3_CLOBL Length = 254 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 77/252 (30%), Positives = 142/252 (56%), Gaps = 15/252 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ +I++DE A E L+ L + + + IV G V K++P+V+F+DI MP + Sbjct: 4 IRAIIIEDEKPAIEELKYVLSKYNFLNIVDVAMTGDVGYELVKKIQPEVVFMDINMPTEN 63 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+ + + I+F+TA+++YA++AFE A DY+LKP D+ R+ T+ RL+++ Sbjct: 64 GISVSKKIKEFNKDINIIFITAYEQYALEAFEIDALDYILKPFDDKRIGVTIKRLQKKID 123 Query: 121 KQDVSLLP-----------ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHE 169 ++ +P + ++ LK IPC +I L+ +K++ + + YV + + Sbjct: 124 EKYKEEIPVMISDILNKLEKEEKTLKKIPCEYRGKIILIDIKNIYYCYTMEDKTYVKT-D 182 Query: 170 GKEGFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL--TVPVSR 227 +E T TL+ +E +T L R HR Y+VN+ +++E+ NG +L++ + +PVSR Sbjct: 183 SEEYITHNTLKEIEKKTDLFRVHRSYIVNIDNIKELYSWFNGTYKLVMNDKEQSEIPVSR 242 Query: 228 RYLKSLKEAIGL 239 +K +KE +G+ Sbjct: 243 NNVKKVKEMLGI 254 >UniRef50_A6TN10 Two component transcriptional regulator, LytTR family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TN10_ALKMQ Length = 256 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 80/253 (31%), Positives = 128/253 (50%), Gaps = 17/253 (6%) Query: 3 KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 K+LIVDDE AR NL L++ ++V E SN + IG + D++FLDIQ+ ++G Sbjct: 4 KILIVDDERPARLNLINSLKDYGQFQVVAEASNGEDAIGFCKENTVDIVFLDIQLQDMTG 63 Query: 63 LEMVGMLDPEHR-PYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 ++ L HR P I+F TA+++YAI+AFE A DYLLKPID+ R +KT+ +L QE+ Sbjct: 64 FDVANELMALHRVPKIIFATAYNQYAIEAFEYSAIDYLLKPIDDIRFKKTMEKLLQEKEV 123 Query: 122 QDVSLLPE----------NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGK 171 L + + + I ++++L + D+ F+ + V S G Sbjct: 124 HSEKALDKVKVLLEKHLDTEHKKQKITLEKEGKLFVLCINDIIFIETDERNTKVVSKRG- 182 Query: 172 EGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILR--NGLTVPVS 226 + +T+ R R HR +L+NL + E+ N ++ +R +P+S Sbjct: 183 IFISNVTMVEWTERLEQYGFFRPHRSFLINLDEIDEVIPWFNHSFQVKMRGYGQGDIPIS 242 Query: 227 RRYLKSLKEAIGL 239 R K K +GL Sbjct: 243 RNKAKVFKGLVGL 255 >UniRef50_Q2N6M0 Two-component response regulator n=7 Tax=Sphingomonadales RepID=Q2N6M0_ERYLH Length = 246 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 8/239 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ LIVDDEPLA E ++V + + +VG S+ + V L PD++ LD+ MP + Sbjct: 9 LRTLIVDDEPLAVERMQVICAKLPKLNVVGTASDGEAALRLVDALTPDLVLLDMTMPGLD 68 Query: 62 GLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GL + L + P ++F+TA D +A++AF+ A DY+LKP+ + RLE+ + R R Sbjct: 69 GLAVARKLGRLDAPPAVIFVTAHDHFAVEAFDLEAIDYVLKPVAQDRLERAIERAIARRG 128 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + + + L+ + S + ++ V+ + + V + + + T+ Sbjct: 129 EARP---EKESEWLQELWVPHRSELIRIETSQVSRIDAERDYVRLYVGD-RTYLLLQTIA 184 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEA 236 LE R +R HR ++ ++ +R + G + L +G + + R YL +K Sbjct: 185 GLEERLDPAEFIRIHRSTILRKDGIRGLRHDGLGVWSVELEDGEALRIGRTYLPKVKAM 243 >UniRef50_A4E9W5 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W5_9ACTN Length = 238 Score = 233 bits (596), Expect = 3e-60, Method: Composition-based stats. Identities = 66/219 (30%), Positives = 122/219 (55%), Gaps = 10/219 (4%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M++ +IVDDE AR LR L++ I + E S+ I + + R DV+FLDI MP Sbjct: 1 MLRAMIVDDEAPARSELRFLLEQTGKIGTITEASSVRSAIEMLMESRVDVVFLDISMPGA 60 Query: 61 SGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 SGL++ L ++ P IVF+TA+ ++A++AF+ A DYL+KP++EARL++ + ++ Q Sbjct: 61 SGLQLAEALHKLKNPPAIVFVTAYSDHAVEAFDVDAVDYLMKPVEEARLDRAIEKVMQRA 120 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 + +++ ++ IP R L+ + D+ F+ ++ + + + + + +L Sbjct: 121 K-----PVTDSKVTIERIPVEKGGRKVLIPVDDIRFIMAKDDYSCIYTVDDR-FLSTTSL 174 Query: 180 RTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAEL 215 E++ R HR+Y+VNLA + ++ +G +L Sbjct: 175 AQFEAKLCDFGFFRVHRRYIVNLACVTDVETVPSGAIQL 213 >UniRef50_B0SFX2 Response regulator n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SFX2_LEPBA Length = 245 Score = 233 bits (596), Expect = 3e-60, Method: Composition-based stats. Identities = 62/241 (25%), Positives = 128/241 (53%), Gaps = 8/241 (3%) Query: 4 VLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGL 63 VLI++DE AR + ++ ++++ G + + +++ + D++F+DI +P ++G+ Sbjct: 8 VLIIEDEYPARMLMMDYVLNCPELKLAGIAESGDKANTLINEKKFDLVFMDINLPVVNGM 67 Query: 64 EMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSKQD 123 +++ + + + TA+ E+A++AF+ A DYLLKP R K++ + + + Sbjct: 68 DILRS-NHSKSTFFIITTAYSEHAVEAFDLDATDYLLKPFSFERFRKSVEKALRFLQESK 126 Query: 124 VSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRTLE 183 + EN + + S ++LL D+ F+S+ + + + K+ T L+ +E Sbjct: 127 QNNSNENLNKI-HLKIQSDSAVFLLPYPDIQFISANNKSCVIHTTQ-KDYETPKLLKEIE 184 Query: 184 SRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT--VPVSRRYLKSLKEAIG 238 + P +R H+ +LVNL+++ +R + G + L+N +PV R Y +SLKEA+ Sbjct: 185 EKLPTNQFVRIHKGFLVNLSYVASLRYDKGGSYTIQLKNEDETTLPVGRSYAQSLKEALK 244 Query: 239 L 239 L Sbjct: 245 L 245 >UniRef50_C9LQT9 DNA-binding response regulator n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQT9_9FIRM Length = 256 Score = 233 bits (596), Expect = 4e-60, Method: Composition-based stats. Identities = 79/247 (31%), Positives = 132/247 (53%), Gaps = 9/247 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKL-RPDVLFLDIQMPRI 60 IK+LI DDE AR L+ L +++IVGECSN + + D++FLDI+MP + Sbjct: 9 IKILIADDELPARGELKYELSTIPNVKIVGECSNGKSVLDFLKTHPNVDLIFLDIEMPVM 68 Query: 61 SGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +GLE + + IVF T + ++AI+AF+ AFDY+LKP DE R+ + + RL+ Sbjct: 69 NGLETAKKIGEMDIPAKIVFATGYGQFAIQAFDLEAFDYILKPYDEERIRRIVDRLQNRL 128 Query: 120 SKQDVSLLP-ENQQALKFIPCTGHSRIYLL-QMKDVAFVSSRMSGVYVTSHEGKEGFTEL 177 ++++ + P E + I R+ ++ ++++ F+ + S + +++ Sbjct: 129 AEREQNRAPGEITAFSQKISLQTIDRVVIINPVQEIVFICTEKSDCSLFYTTKGIITSKI 188 Query: 178 TL---RTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILR--NGLTVPVSRRYLKS 232 TL +L R H+ Y+VNL+ +QEI +DNG L + + VPVSR YLK Sbjct: 189 TLRDSESLLEPVGFFRTHKGYIVNLSMIQEIHPQDNGTLLLSMDYFSRDKVPVSRHYLKD 248 Query: 233 LKEAIGL 239 K + + Sbjct: 249 FKAIMHM 255 >UniRef50_C7PBU1 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PBU1_CHIPD Length = 257 Score = 233 bits (595), Expect = 4e-60, Method: Composition-based stats. Identities = 85/247 (34%), Positives = 142/247 (57%), Gaps = 15/247 (6%) Query: 3 KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 L+VDDE +A L+ LQ I+IVGE + + +++LRP+++FLDI+MP +G Sbjct: 11 TTLLVDDEVIAIHRLKKALQVYPQIKIVGEAMDGAAAVELINRLRPELVFLDIRMPGFNG 70 Query: 63 LEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSKQ 122 E++ L + P IVF+TA++EYAI+AFE+++ DYLLKP++E RLE T+ R+RQ ++ Sbjct: 71 FEVLDRLT--YMPMIVFVTAYEEYAIRAFEKNSLDYLLKPVEEERLEMTINRIRQRPKQE 128 Query: 123 DVSLL--------PENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF 174 L +++ + IP +I+L+ ++DV + +R V V + EG+E Sbjct: 129 TELLSRIKMLLGEQQSEPRISTIPVRSGDKIFLVHVQDVVLLEAREKYVVVHT-EGEEQL 187 Query: 175 TELTLRTLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN--GLTVPVSRRYL 230 + +L LE R P +R HR Y+VN ++EI+ G L++ + G V + Y Sbjct: 188 IDYSLSYLEGRLPETFVRVHRSYIVNKLKIREIQKYFKGTFMLLMNDRKGSKVKTAASYN 247 Query: 231 KSLKEAI 237 ++K + Sbjct: 248 DTIKTKL 254 >UniRef50_Q15WR1 Response regulator receiver protein n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15WR1_PSEA6 Length = 276 Score = 233 bits (595), Expect = 4e-60, Method: Composition-based stats. Identities = 75/263 (28%), Positives = 119/263 (45%), Gaps = 37/263 (14%) Query: 4 VLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGL 63 L+VDDEPLARE L + L E +I ++G C+NA + + +PDV+FLDI+MP +GL Sbjct: 6 ALVVDDEPLAREGLALRLAEYENITVLGCCNNASQAYDVLSVKQPDVIFLDIEMPGKTGL 65 Query: 64 EMVGMLDPEHRPY-IVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLAR-------- 114 E+ L E P IVF+TAF E+A+ AF+ A DYLLKP + RL++ + + Sbjct: 66 ELAEQLRLEGNPATIVFVTAFREFAVNAFDFKASDYLLKPFSDERLKECIEKLSCAGDVT 125 Query: 115 ------------------------LRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQM 150 + ++S E + + I S +++ Sbjct: 126 RVVRQHEKLGRLLSRKTGNSIDSFIHSLEVSNELSSTHELNELQQVISLKSGSVWIRVKL 185 Query: 151 KDVAFVSSRMSGVYVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRL 207 D+ ++ + + V + G TL+ E R R ++N+A L + Sbjct: 186 DDIVWIEAAGDYMCVHTT-GDTHIIRKTLKQFEQELDSVHFPRVSRSAIINIAKLTTLTP 244 Query: 208 EDNGQAELILRNGLTVPVSRRYL 230 NG+ L N + V V R+Y Sbjct: 245 NSNGEYVAQLGNDIQVKVGRKYK 267 >UniRef50_Q025Y4 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q025Y4_SOLUE Length = 255 Score = 233 bits (595), Expect = 4e-60, Method: Composition-based stats. Identities = 73/245 (29%), Positives = 125/245 (51%), Gaps = 19/245 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+VL+ DDEPLAR +R L D+ +VGE N E + A+ L PD+LFLD+QMP + Sbjct: 7 IRVLVADDEPLARRGVRQLLAPHRDMTVVGEARNGRETLTAIDALSPDLLFLDVQMPEMD 66 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E++ P P +VF+TA D++A++AFE HA DYL+KP+ R E L R+R+ Sbjct: 67 GFEVLRARGPHRMPAVVFVTAHDQFAVRAFEAHALDYLVKPLRVDRFEAALHRVRERLRL 126 Query: 122 QDVSLLPEN----------QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGK 171 + L + ++++ + ++ + ++ ++ + + K Sbjct: 127 MEAVDLAARLTALLETKREKCGVEWLVVPVATGELVIPVAEIDWIGADDYYACLHVG-AK 185 Query: 172 EGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRR 228 +L +LE+R R HR +V + ++E+ E++LR G+ V +SRR Sbjct: 186 SYLLRESLASLETRLDPRRFARVHRSAIVQIDRIRELH-----GDEVVLRGGMRVALSRR 240 Query: 229 YLKSL 233 ++ Sbjct: 241 RRAAI 245 >UniRef50_C6PCY4 Two component transcriptional regulator, LytTR family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PCY4_CLOTS Length = 255 Score = 233 bits (595), Expect = 4e-60, Method: Composition-based stats. Identities = 75/252 (29%), Positives = 129/252 (51%), Gaps = 14/252 (5%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSD-IEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 +++ L+VDDE A E L+ L + + IE++G N E + L+PDV+FLDI +P+ Sbjct: 2 ILRSLVVDDELPAIEGLKYLLSDYKNTIEVIGTAKNGTEAFDKILSLKPDVVFLDINIPK 61 Query: 60 ISGLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE 118 ++G+ + + + P +VF+TA+D YAI+AFE A DYLLKPI+ RL KT+ ++ Sbjct: 62 LNGINVANNITSLDKVPLVVFVTAYDSYAIEAFEIGAIDYLLKPINPCRLNKTINKIVNM 121 Query: 119 RSKQDVSLLPENQQ------ALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 K D+ L + + +P RI L+ ++ + + V V + Sbjct: 122 YDKPDMWQLYLDNETRFFEGQFHKLPVEKFGRIKLVDFNEIVYAEAMDGKVLVKTKND-I 180 Query: 173 GFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG--LTVPVSR 227 T++ LE+R R + ++VNL ++ EI G L++ + + VS+ Sbjct: 181 FDYNDTMKNLENRLSESIFFRVQKSFIVNLNNILEILPWFKGTYWLVMDDDKKTKISVSK 240 Query: 228 RYLKSLKEAIGL 239 ++ LK+ GL Sbjct: 241 NKIRELKKIFGL 252 >UniRef50_Q3SM66 Response regulator receiver domain protein (CheY) n=6 Tax=Proteobacteria RepID=Q3SM66_THIDA Length = 254 Score = 232 bits (594), Expect = 5e-60, Method: Composition-based stats. Identities = 76/245 (31%), Positives = 121/245 (49%), Gaps = 10/245 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSD---IEIVGECSNAVEGIGAVHKLRPDVLFLDIQMP 58 ++VLIVDDE AR L L + + +E+VGE N + + + D + LDI+MP Sbjct: 8 LRVLIVDDEAPARARLGDVLADCAGRLPVEVVGEAENGLAALALAQQTAVDAVLLDIRMP 67 Query: 59 RISGLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ 117 + GLE L P I+F TA+D YA +AF+ +A DYLLKP+ RL + L+R + Sbjct: 68 VMDGLECAAHLNRLAAPPAIIFSTAYDAYACQAFDLNAVDYLLKPVRAERLVRALSRAHR 127 Query: 118 ERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL 177 +K L + +A + RI L+ + D+ ++ + + V V + +E E Sbjct: 128 LSAKTLDQLREAHPKARTHLSLNEKGRIVLIPVADILYLKAELKYVTVRTA-AREFLIEE 186 Query: 178 TLRTLESRTP--LLRCHRQYLVNLAHLQEI--RLEDNGQAELILRN-GLTVPVSRRYLKS 232 +L LE+ LR HR LV ++E+ ++ L L + VSRR + Sbjct: 187 SLTQLEAEFGERFLRIHRNCLVARDRVREVGKSPGEDEGHFLRLDGLDERLTVSRRQYTA 246 Query: 233 LKEAI 237 L+E + Sbjct: 247 LRETL 251 >UniRef50_C9NAB5 Two component transcriptional regulator, LytTR family n=5 Tax=Streptomyces RepID=C9NAB5_9ACTO Length = 303 Score = 232 bits (594), Expect = 6e-60, Method: Composition-based stats. Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 19/250 (7%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHK---------LRPDVL 51 M++VL VDDE A E L L+ I + A E + + DV+ Sbjct: 54 MLRVLAVDDEEPALEELLYLLRADPRIRSAEGATGATEALRRIGAAVDAGPDDPSAIDVV 113 Query: 52 FLDIQMPRISGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEK 110 FLDI M ++GL++ +L P IVF+TA + +A+ AF+ A DY+LKP+ RL + Sbjct: 114 FLDIHMAGLTGLDVAQLLAGFAAPPLIVFVTAHEGFAVHAFDLKAVDYVLKPVRRERLAE 173 Query: 111 TLARLRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEG 170 + R+ ++ ++ S+ I I + + D+A+ ++ + + G Sbjct: 174 AVRRVAEQVGERTASVHDAAADQ---IAVELGGVIRFVPVDDIAYAEAQGDYARLHTSSG 230 Query: 171 KEGFTELTLRTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSR 227 + L TLE R +R HR++LV L + E+ D G + + VSR Sbjct: 231 -SHLVRIPLTTLEERWRSRGFVRIHRRHLVALNRIDEL-RLDAGSMSVR-IGDAELAVSR 287 Query: 228 RYLKSLKEAI 237 R+ +SL++ + Sbjct: 288 RHTRSLRDLL 297 >UniRef50_D2QEL1 Two component transcriptional regulator, LytTR family n=2 Tax=Spirosoma linguale DSM 74 RepID=D2QEL1_9SPHI Length = 244 Score = 232 bits (594), Expect = 6e-60, Method: Composition-based stats. Identities = 55/254 (21%), Positives = 108/254 (42%), Gaps = 25/254 (9%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI+ + VDDEP A L F Q+ I+++ + E + + + D+LFLDI MP + Sbjct: 1 MIRAIAVDDEPPALRILTHFCQQAGSIDLLKTFTRTDEALTYIEQYPVDLLFLDINMPSM 60 Query: 61 SGLEMVGMLDP-----EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL 115 SG++ + ++F TA+ EYA++ F +A DYLLKP R + + + Sbjct: 61 SGIDFYRAIANVSTVGRQPVMVIFTTAYGEYAVEGFTLNAVDYLLKPFTFERFLQAITKA 120 Query: 116 RQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEG----- 170 Q + + ++ ++ + + D+ ++ + + Sbjct: 121 TDVYRWQQRA----DTTTEAYVFVRADYTLHKIALTDILYIEGLDDYLKIHLQPETGKPG 176 Query: 171 --KEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPV 225 K +T++++ R P +R HR Y+V L ++ + + + + G +P+ Sbjct: 177 VPKPVVARMTMKSMLERLPAADFVRVHRSYIVPLTRIEAV------RNKTLFVAGRDIPI 230 Query: 226 SRRYLKSLKEAIGL 239 Y + GL Sbjct: 231 GASYEADFLKRFGL 244 >UniRef50_Q028U9 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q028U9_SOLUE Length = 258 Score = 232 bits (593), Expect = 8e-60, Method: Composition-based stats. Identities = 76/248 (30%), Positives = 127/248 (51%), Gaps = 15/248 (6%) Query: 4 VLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGL 63 VL+ DDE AR L L+++ I V E ++ + +H RPD++FLD++MP + GL Sbjct: 8 VLVADDEKPARRRLLDLLRQEPGIASVWEATDGEMAVEMIHCYRPDIVFLDVKMPELDGL 67 Query: 64 EMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS--- 120 ++ + P +F+TA+DE+AI+AFE +A DYLLKP + R ++R R Sbjct: 68 GVIDRVGIAAMPLTIFVTAYDEHAIRAFEANALDYLLKPYSDPRFRSAMSRARARLDERG 127 Query: 121 --------KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 KQ ++ N L+ I G L + +V + + V + + GKE Sbjct: 128 LREFAERVKQMLTPAVVNGPPLERIVVKGRGTTRFLDVTEVECIEAAGMYVVLHTR-GKE 186 Query: 173 GFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRY 229 +L +E++ LR HR +VNLAH+ + +G+ E+IL++G V +SR Y Sbjct: 187 LLHRSSLSDMEAKLDPRNFLRIHRSAIVNLAHVGHLEAISHGEFEVILKSGKRVRLSRTY 246 Query: 230 LKSLKEAI 237 +++ + Sbjct: 247 RGPVEQRL 254 >UniRef50_C7M7B0 Two component transcriptional regulator, LytTR family n=1 Tax=Capnocytophaga ochracea DSM 7271 RepID=C7M7B0_CAPOD Length = 232 Score = 232 bits (592), Expect = 9e-60, Method: Composition-based stats. Identities = 57/239 (23%), Positives = 111/239 (46%), Gaps = 12/239 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + LI+DDEPLAR + +++ S++++VG N+V + K +LFLDI+MP ++ Sbjct: 1 MNCLIIDDEPLARIGMERLVRQYSNLKVVGTFKNSVGVADFLKKNEVHLLFLDIEMPGVN 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL L + ++F TA+ +YA+ ++E A DYL+KPI R +K +A+ Sbjct: 61 GLVFARTLPEQ--TLVIFTTAYSQYALDSYEVDALDYLVKPITLERFKKAIAKAESYHQL 118 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 + I + R Y + D+ ++ + V + + + T + L+ Sbjct: 119 LTQQKTDFEAIDTQCISIRANRRNYRIPHNDILYIEALKDYVIIHTFTDR-YITWINLKN 177 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 + + P +R ++ Y+VN+ H+ + + +P+ R Y + + Sbjct: 178 IHRQLPESVFVRVNKSYVVNIQHVTSYTHQF------VYIGETEIPIGRAYQEEFLAQL 230 >UniRef50_B0MWM6 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B0MWM6_9BACT Length = 247 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 121/247 (48%), Gaps = 17/247 (6%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+K + +DDEPLA L+ ++ + + +++ +NA+E + D++F+DI MP + Sbjct: 1 MLKCIAIDDEPLALRQLQGYIAKINFLKLEKAFTNAIEAQQYLAGNPIDLIFVDINMPDL 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ--- 117 SG+E V L RP I+F TA+ EYA++ F+ A DYLLKP A +++ + + Sbjct: 61 SGVEFVRSL--VSRPMIIFTTAYSEYAVEGFKLDAIDYLLKPFSFADFNRSVTKAQSLYE 118 Query: 118 ----ERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 +++ DV + ++I + L+++ D+ ++ S V + + Sbjct: 119 LLAYRKTQGDVPAPEATPRDREYISIKADYKTTLVRISDIVYLESEGEYVRLHLDDRSTI 178 Query: 174 FTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYL 230 T L+ +E+ P +R HR Y+VNL ++ + + + VP+ Y Sbjct: 179 TTLFRLKNMEAALPSEMFMRVHRSYIVNLQRIRSYVK-----GRVFISDSEYVPIGENYR 233 Query: 231 KSLKEAI 237 ++ + I Sbjct: 234 EAFQRYI 240 >UniRef50_B1KPY2 Two component transcriptional regulator, LytTR family n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KPY2_SHEWM Length = 246 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 76/245 (31%), Positives = 124/245 (50%), Gaps = 8/245 (3%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+KVLIVDDE LAR L L + DIEIVGE + + + + K D+ F+DIQMP + Sbjct: 1 MLKVLIVDDEYLARLELTRLLSKYVDIEIVGEAEDGHQALELLKKTSVDLAFVDIQMPEM 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GLE + +VF TAF E+A+ AFE +AFDY++KPI RLE L ++R + Sbjct: 61 DGLEFAKQ-AESQQFQLVFCTAFSEHAVDAFELNAFDYIVKPIMPERLEAVLNKVRLIQE 119 Query: 121 KQDVSLLPENQ--QALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELT 178 D + + Q + S ++++ ++ S + V V S GK ++ Sbjct: 120 THDETEQDDIQCLPDNHGLLLKFGSDYKIVRINEICRFESLGNHVAVYSDSGKSYL-HIS 178 Query: 179 LRTLESRTP---LLRCHRQYLVNLAHLQEIRLE-DNGQAELILRNGLTVPVSRRYLKSLK 234 L +E + + R +V + + +I +G ++ + NG + VSRR ++ L+ Sbjct: 179 LSKVEKKLDPAVFFKASRSDIVRVDQIDKIEEGMASGSLQVHMNNGQEIDVSRRQVQLLR 238 Query: 235 EAIGL 239 + + Sbjct: 239 KIFSI 243 >UniRef50_A0Y0Z9 Response regulator of the LytR/AlgR family protein n=1 Tax=Alteromonadales bacterium TW-7 RepID=A0Y0Z9_9GAMM Length = 262 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 83/253 (32%), Positives = 135/253 (53%), Gaps = 18/253 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +++L DDE ARE L L +++VG +N E I +++L PDV+ LDIQMP I+ Sbjct: 13 MRILFADDELPAREKLSHQLSLMEHVDVVGIATNGKEAIALINELTPDVVLLDIQMPEIN 72 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GLE++ +L+ ++P I++ TA+D++AI+AFE + DYLLKP ARL+K LA+ +Q+ + Sbjct: 73 GLELIDLLN--YQPIIIYTTAYDQFAIEAFEHASTDYLLKPFPIARLKKALAKAQQQLDQ 130 Query: 122 QDVSLLPE----------NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGK 171 Q + +L + RI+LL D+ F+ S + E Sbjct: 131 QRAHTHVTSCAGEPAFTLTESSLNKLVSKSGERIFLLSPSDIKFIKSEQGNSLAWNGETF 190 Query: 172 EGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG--LTVPVS 226 ++ TL LE +R HR YLVN+ H++EI+ NG+ +I+ + + S Sbjct: 191 NHLSD-TLDQLEHALAMHNFVRIHRSYLVNIDHIKEIQRWFNGKLMVIVNDDVKSELSTS 249 Query: 227 RRYLKSLKEAIGL 239 R LK+ + + Sbjct: 250 RAGADKLKQLLHI 262 >UniRef50_A6LQW3 Two component transcriptional regulator, LytTR family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LQW3_CLOB8 Length = 252 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 81/247 (32%), Positives = 139/247 (56%), Gaps = 10/247 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IKV IV+DE ++ + L+ + + ++VG+ + + + + PD+ F+DI +P + Sbjct: 7 IKVAIVEDEAISSDELKYIISKDGRFKVVGQAYDGISALTLIESEEPDIAFIDINIPGKN 66 Query: 62 GLEMVGMLDPEHRPYI-VFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+++ + I +FLTA+D YAI+AFE +DY+LKP DE R+E++L S Sbjct: 67 GIKLAEDVKEIFPDIILIFLTAYDTYAIRAFELKVYDYILKPYDEKRIEESLNCALNTIS 126 Query: 121 KQDVSLLP------ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF 174 ++ + + EN+QALK IPC + +I L+ + ++F S YV +++ Sbjct: 127 NRNENEIINILSKLENKQALKKIPCENNGKIILIDVNKISFFYSEGERNYVKTNKD-IYC 185 Query: 175 TELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL--TVPVSRRYLKS 232 T TL+ L +T RCHR Y+VNL ++E+ NG +LI+ + +PVSR ++K Sbjct: 186 TTKTLQELTEKTNFFRCHRSYVVNLEKVKEVYPWFNGTYKLIIDDDENNEIPVSRSHVKE 245 Query: 233 LKEAIGL 239 +K +GL Sbjct: 246 IKIILGL 252 >UniRef50_D2QUQ7 Two component transcriptional regulator, LytTR family n=3 Tax=Sphingobacteriales RepID=D2QUQ7_9SPHI Length = 250 Score = 230 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 71/250 (28%), Positives = 120/250 (48%), Gaps = 16/250 (6%) Query: 3 KVLIVDDEPLARENLRVFLQEQ-SDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 K L++DDEP +NLR L ++I G NA G ++ +PD+LFLDIQMP + Sbjct: 4 KALLIDDEPNNLDNLRALLDVYCPQVDICGMALNAEAGQRLLYTHQPDLLFLDIQMPGQN 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G +++ L PEH ++F+TA+D+YAI+A A DYLLKP+D L+ + R ++R Sbjct: 64 GFDLLRKL-PEHDFEVIFVTAYDQYAIQAMRFAAVDYLLKPVDIGELQAAVDRAIKQRRL 122 Query: 122 QDVSLLPEN---------QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 + + EN + I ++ ++ S + +G+ Sbjct: 123 KVQNQQLENLLTLLKTGAANEAQRITLATAKETRFVKTSEIVRCQSSNNYTTFYLTDGET 182 Query: 173 GFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRY 229 + + +RCH+ +LVN A ++ + E L+L +G +P++R Sbjct: 183 LLVCRPIYEYDELLKSHGFMRCHQSHLVNKAFIKSWKKEFGD--FLLLTDGTELPIARGK 240 Query: 230 LKSLKEAIGL 239 LK+A+ L Sbjct: 241 KDELKKALRL 250 >UniRef50_B9E9A6 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E9A6_MACCJ Length = 236 Score = 230 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 72/242 (29%), Positives = 121/242 (50%), Gaps = 11/242 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +++LIVDDEPLAR LR L + +V E + E + ++ ++LFLDI + S Sbjct: 1 MRILIVDDEPLARNELRYLLNNIDNTLVVDEADSVEETLTSLLSETYELLFLDINLIDES 60 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GLE+ ++ +H P IVF TA D +A+KAFE +A DY+LKP ++ R+E L + Sbjct: 61 GLELAEKINKMKHPPKIVFATAHDSFAVKAFELNALDYILKPFEQKRIEAALNKA----- 115 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + S+ + L + +IY++ ++D+ + + + + E L Sbjct: 116 -KASSINTNQESKLPTLSIQIDDKIYVINIQDIIALYVEEGQLNIITVN-SEYAIHEPLS 173 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 E + P +R HR ++N H++ N ++ L + + VSR Y+K K I Sbjct: 174 AFEKKLPENVFMRIHRSSIINKHHIKSAEQWFNHTYQVQLTKDIKLQVSRSYIKQFKHEI 233 Query: 238 GL 239 GL Sbjct: 234 GL 235 >UniRef50_C6W252 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W252_DYAFD Length = 245 Score = 230 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 67/245 (27%), Positives = 119/245 (48%), Gaps = 19/245 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I LIVDDE LAR L ++ + ++ +VG C++A+E G + K R D+L LDIQMP ++ Sbjct: 3 INCLIVDDELLARRLLTDYVGKMPELNLVGTCASAMEAQGYLQKQRIDLLLLDIQMPDVT 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS- 120 G+ ++ L ++P + TA+ EYA++ +E DYLLKPI R + +R + Sbjct: 63 GISLLRSL--PNKPVTILTTAYAEYALQGYELFVLDYLLKPISFERFFQAASRAVEYIGL 120 Query: 121 ------KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF 174 + P + +I +I+ + +D+ + + + + S G++ Sbjct: 121 LGKKALPRYEEARPPHDVPHDYIFVKSDYKIHKIAHRDMDVIEAYGEYILIYSG-GQKIM 179 Query: 175 TELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLK 231 T + LE P +R HR ++VN + + I+ G + G VP+S+ Y Sbjct: 180 TLGQMGKLEQMLPKPGFVRVHRSFIVNFSKIDAIQ---GGTIHV---GGREVPLSKGYRD 233 Query: 232 SLKEA 236 + + Sbjct: 234 AFMQL 238 >UniRef50_A6EIX0 Two-component system response regulator n=1 Tax=Pedobacter sp. BAL39 RepID=A6EIX0_9SPHI Length = 235 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 51/240 (21%), Positives = 111/240 (46%), Gaps = 12/240 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K ++VDDE A E L +++ S + V C +++E + + + D++FLDIQMP I+ Sbjct: 1 MKCILVDDERPALELLEDNVKQISYLRPVASCRSSLEALEVLRTQQVDLMFLDIQMPGIN 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GLE++ + P ++ +TA++ +A+ F DYL+KP+ R K + + + Sbjct: 61 GLELLRSIKQ--PPMVILITAYETHALDGFNLDVVDYLVKPVPFPRFLKAVEKAHERFQF 118 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 + + P + + + + + ++D+ ++ V + T + ++ Sbjct: 119 RQPEIKPVTVEQ-DHVFVNANYALVKVSLQDITYIEGLKDYVRIHVGNDHPVVTRMAMKG 177 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIG 238 +E R +R H+ ++V L + ++ +L G+ +P+ Y L + Sbjct: 178 IEERLNTGRFMRVHKSFIVALDKITSVQKTQ------LLVAGVEIPIGEGYRHKLLAYVS 231 >UniRef50_D2MJZ8 Transcriptional regulator, LytR/AlgR family n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MJZ8_9BACT Length = 260 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 78/253 (30%), Positives = 124/253 (49%), Gaps = 17/253 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++V++ DDE AR+ L L+ D+++VGE + E + + +PD+ LD+QMP + Sbjct: 5 LRVIVADDERPARQFLVTMLRSFDDVDLVGEAKSGNETMRLIEHTQPDLALLDLQMPEMD 64 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL +V L P + F+TAFDE+A+ AFE A DYLLKP+D RL KT+ R + + Sbjct: 65 GLSIVRSLRHGRIPLVAFVTAFDEHAVSAFEIEALDYLLKPVDRDRLRKTIDRAHERLER 124 Query: 122 QDVSLLPEN--------------QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTS 167 ++ + Q + P IYLL + +A V S ++VT+ Sbjct: 125 DALAEQESDRQPGPADRDGPAPAGQYIDRFPIRKQDDIYLLPVHHIASVVSEGELMHVTT 184 Query: 168 HEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVP 224 + L+TLES+ LR R LVN+ +++I G + L N + Sbjct: 185 VGKERYTMNYRLKTLESKLDPKRFLRVGRGALVNVEAIRKITPMPGGSYLVTLMNTQQLR 244 Query: 225 VSRRYLKSLKEAI 237 VSR + L+ + Sbjct: 245 VSRSQSRVLRGHL 257 >UniRef50_Q182U2 Two-component response regulator n=5 Tax=Clostridium RepID=Q182U2_CLOD6 Length = 256 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 69/257 (26%), Positives = 129/257 (50%), Gaps = 20/257 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ +IV+DE AR+ LR F++ +S IE+V E +N +E + + + + DV+FLDI +P + Sbjct: 1 MRAIIVEDEFPARKELRYFIENKSGIEVVSEFTNGIEVLDFIQENKIDVIFLDINIPHLD 60 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ--- 117 G+ + L+ + RP IVF+TA++ YA+ AF FDY+LKP E R+ L +L + Sbjct: 61 GMLLAKTLNQFKSRPKIVFITAYESYAVDAFSLDVFDYILKPYSEERIISMLNKLEKSEM 120 Query: 118 -----------ERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT 166 + ++ E ++ I ++ ++ + D+ + + ++ Sbjct: 121 SDIELSNVNSNLYKYKKEAVNQEIEEITHKISLWKGDKLVVIDIDDIYYCEANERQTFIY 180 Query: 167 SHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL-T 222 + E ++ + + +E+ R HR Y+VNL ++EI N L L+N Sbjct: 181 T-EKEKFILKEGISEVENLINDKTFFRTHRSYIVNLTKVKEIIPWFNNTYILKLKNSDYE 239 Query: 223 VPVSRRYLKSLKEAIGL 239 V VSR +K + + + Sbjct: 240 VTVSRSKVKEFRLLMHI 256 >UniRef50_D0LSR9 Two component transcriptional regulator, LytTR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LSR9_HALO1 Length = 240 Score = 229 bits (586), Expect = 5e-59, Method: Composition-based stats. Identities = 74/242 (30%), Positives = 121/242 (50%), Gaps = 8/242 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++VL+VDDE AR+ L L ++ + +AV + + P+V+ LDI MP I Sbjct: 1 MRVLVVDDEAPARQRLARMLARIPEVGDIAVADSAVAARALLRQSPPEVVLLDIHMPEID 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL ++ + P ++F+TA++++A++AFE A DYLLKP+++ARLEK L R R + Sbjct: 61 GLTLLEL--EPAMPPVIFVTAYEQHAVRAFELAAVDYLLKPVNQARLEKALRRARALGAS 118 Query: 122 QDVSLLPE-NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 +L A + + L + + + + G+E + +L Sbjct: 119 DIAALHGHMRPDAPPRLAARAGEVLRLFDPAQLTRIRAADKYAIIDMG-GEEFVLDDSLT 177 Query: 181 TLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 +LE R +R HR L+NLA ++ + E+ L +G PVSRR L LK + Sbjct: 178 SLEKRLAPHGFVRVHRAELINLAAVRALH-GSGSATEVELSDGQRAPVSRRLLAELKRRL 236 Query: 238 GL 239 GL Sbjct: 237 GL 238 >UniRef50_Q11YH0 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YH0_CYTH3 Length = 251 Score = 229 bits (586), Expect = 5e-59, Method: Composition-based stats. Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 13/249 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQ-SDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 IK +I+DDEP R L ++ I+++G+ + EG+ + L P+++FLDI MP + Sbjct: 5 IKAIIIDDEPDGRTVLHSLIKIYCPQIDVLGQSCSGEEGLSMIQDLNPELVFLDIDMPGM 64 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G ++ L ++F+TA YA+KA + A DYLLKP+D+ L + + + + Sbjct: 65 NGFSLLKRLKEIT-FEVIFVTAHHHYALKAIKHSALDYLLKPVDKTELIEAVEKFIKLDK 123 Query: 121 KQDVSLL-------PENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 + + ++ + I ++D+ + + V G Sbjct: 124 ENVNERMSFLLKNESKDASEITQIILNVREGYIFTDIEDIIRCEADGNYTMVHLKNGTRQ 183 Query: 174 FTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYL 230 TL+ E R H+ +L+NL HL++ D G +++ + + VSRR Sbjct: 184 LASKTLKEFEHILGQNNFWRIHKSHLINLKHLKKYVKGDGGG-NVVMTDNSEIEVSRRNK 242 Query: 231 KSLKEAIGL 239 + + L Sbjct: 243 DAFLKQFNL 251 >UniRef50_C5C1Z4 Two component transcriptional regulator, LytTR family n=18 Tax=Actinomycetales RepID=C5C1Z4_BEUC1 Length = 319 Score = 229 bits (585), Expect = 6e-59, Method: Composition-based stats. Identities = 72/241 (29%), Positives = 115/241 (47%), Gaps = 13/241 (5%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+ VL VDDEP A L L+ + V S+ + + DV LDI+ P + Sbjct: 57 MLTVLAVDDEPPALRELAYLLEADELVGRVLTASDGAAALRLLETQDVDVAVLDIRTPVL 116 Query: 61 SGLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 SGL++ +L H P IVF+TA+DE+A+ AF+ A DY++KP R Sbjct: 117 SGLDLARVLARFAHPPAIVFVTAYDEHAVDAFDVRAVDYVMKPYRPE------RLAAAVR 170 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 + E + + I ++ DV FVS+ + + +G E + L Sbjct: 171 RAAAAGAVVEQEADGETIAVELAGVTRFVRRGDVLFVSAHGDYARLHTPQG-EHLVRIPL 229 Query: 180 RTLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEA 236 TL R +R HR +LV LAH++E+ + + ++ G T+PVSRR+ + L+E+ Sbjct: 230 STLAERWVDAGFVRIHRSHLVQLAHVRELHSDSGHWSVVV--AGQTLPVSRRHARDLRES 287 Query: 237 I 237 + Sbjct: 288 L 288 >UniRef50_A4BAR2 Alginate biosynthesis regulatory protein AlgR-like protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BAR2_9GAMM Length = 238 Score = 229 bits (584), Expect = 8e-59, Method: Composition-based stats. Identities = 74/240 (30%), Positives = 123/240 (51%), Gaps = 7/240 (2%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++VL+VDDEPLARE L FLQ+ D+E + S+ E + ++ R DVL LDI+MP ++ Sbjct: 1 MRVLVVDDEPLARERLVRFLQDIDDVENIATASSGEEALSKLNDFRADVLLLDIRMPGLN 60 Query: 62 GLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GL + + E P I+F TA+D++A++AF+ A YLLKPI L L R+ Sbjct: 61 GLSVADRVQQQEQPPAIIFCTAYDDHAMEAFQVRAQSYLLKPIQRQALTDALHTCRRLNR 120 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 Q +L + QQ + + + + DV F + V + G+ + +L+ Sbjct: 121 AQVQAL--DTQQQVDSLSVQHGREKEIWPLSDVYFFRAEQKYVMLFGLHGER-VVDESLK 177 Query: 181 TLESRT--PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKSLKEAI 237 LE R +R HR L+ A ++++ + G + +R + VSRR+ + ++ Sbjct: 178 ALEQRFASSFVRVHRNTLIARARVEKLYRDHEGGYWVRVRGVEEPIAVSRRHAREVRALF 237 >UniRef50_C7PII0 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PII0_CHIPD Length = 251 Score = 229 bits (584), Expect = 8e-59, Method: Composition-based stats. Identities = 61/251 (24%), Positives = 115/251 (45%), Gaps = 18/251 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQ-SDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 ++ +IVDDE L+R L++ L++ + IV C++ + + A+ K +PD+LFLDI+MP + Sbjct: 1 MRTIIVDDEKLSRSVLKLLLEKHCPAVNIVAVCADGISALEAIEKYQPDLLFLDIEMPGL 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G E++ + I+ T++D YA+ A +A DYLLKPI L + + Sbjct: 61 NGFEVLKA-CKDASFSIIVTTSYDHYALDAIRHNALDYLLKPIIRDDLTDAVDKAMARHQ 119 Query: 121 KQDVSLLPENQQAL----------KFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEG 170 ++ + L + + + +L +KD+ + + V Sbjct: 120 QKAQPESKSDTSILEVLHQHLYPGERLALPSPEGLRILLVKDILYCVADGETTLVHLVNT 179 Query: 171 K-EGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVS 226 +L+ +E + R H Y++NL ++ D G +I+ +G +PVS Sbjct: 180 TAPSLVCRSLKEVEGQLKNKGFFRVHHSYVINLNYMDRYIKGDGGD--IIMSDGSCIPVS 237 Query: 227 RRYLKSLKEAI 237 R + + I Sbjct: 238 RHRKQEFMDRI 248 >UniRef50_A8F4Q4 Two component transcriptional regulator, LytTR family n=1 Tax=Thermotoga lettingae TMO RepID=A8F4Q4_THELT Length = 223 Score = 229 bits (584), Expect = 9e-59, Method: Composition-based stats. Identities = 72/239 (30%), Positives = 123/239 (51%), Gaps = 20/239 (8%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MIKV I++DE LAR+NL +++ S+ E+VG S E + + DV+FLD+++ Sbjct: 1 MIKVAILEDEQLARDNLEQLIRKYSEFELVGSFSTGRELLRHLK--DIDVVFLDVRLSGE 58 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SGL++ + IVF+TA+ EYA++AFE +A DYL+KP+ E R + + ++ Q S Sbjct: 59 SGLDVSKKIK---STGIVFVTAYPEYAVEAFEVNAIDYLVKPVSEERFSECVEKISQICS 115 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + +P I L+ KD+ F+ + + G+ + Sbjct: 116 RSLA-----------KLPVKDFDGILLIDFKDILFIEAFGKKCMACTINGEYEVYHWNIS 164 Query: 181 TLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 LE R P +R H+ Y+ NL H+++I ++ + N +PVS++Y K +K + Sbjct: 165 HLERRLPREFVRVHKSYICNLEHVKKILCSPC--FQIEMENSKLIPVSKKYQKFVKSVL 221 >UniRef50_C1AAC5 LytT family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AAC5_GEMAT Length = 268 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 78/260 (30%), Positives = 125/260 (48%), Gaps = 24/260 (9%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ LIVDDEPL R LR L DIEIVGE + + + L PD++FLDIQMPR S Sbjct: 5 IRALIVDDEPLGRRRLRDLLAASPDIEIVGESVDGTAAMADITALAPDLVFLDIQMPRGS 64 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL++V + P+ P +F+TA D +A++AF+ A DYLLKP + R L R R+ + Sbjct: 65 GLDVVRAMGPDRMPITIFVTAHDAFALQAFDAAAVDYLLKPFSDERFADALKRARRLIAL 124 Query: 122 QDVSLL--------------------PENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMS 161 +D L P L+ I R+ ++ + + ++ + Sbjct: 125 EDREQLHAQLRSLLDMPSPPADNLPVPNAPAYLERIAVQMRGRMRVVPVGQIDYIVANEP 184 Query: 162 GVYVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILR 218 + + +L+ LE R +R HR +V + + + + +L+LR Sbjct: 185 YAELHVGT-ERYLIRDSLQRLEERLDPARFIRVHRATIVRIDVIDTLLRGEGSDYQLVLR 243 Query: 219 NGLTVPVSRRYLKSLKEAIG 238 NG+ + V R ++L+ +G Sbjct: 244 NGVRLRVGRSRREALEALLG 263 >UniRef50_Q479S3 Transcriptional regulator, LytR/AlgR family n=3 Tax=Betaproteobacteria RepID=Q479S3_DECAR Length = 262 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 80/249 (32%), Positives = 120/249 (48%), Gaps = 15/249 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQS---DIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMP 58 +KVLIVDDEPLAR+ LR L + S E+VGE +N + + A+ + DV+ DI+MP Sbjct: 11 LKVLIVDDEPLARDRLRALLSDLSAQLSSEVVGEAANGLLALEALRQQTVDVVLADIRMP 70 Query: 59 RISGLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL-- 115 + G+E+ L E P ++F TA+D YA++AF+ +A DYLLKP+ RL L ++ Sbjct: 71 GMDGIELATHLGRLEKPPAVIFTTAYDNYAVQAFDLNAVDYLLKPVRVQRLLAALQKVPG 130 Query: 116 -RQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF 174 R + S + C R+ L+ + +V + + + V + E +E Sbjct: 131 PRPDTSLLANIGQEVRGGGRTHLSCHERGRLLLVPIAEVLYFKADLKYVTARTVE-REYL 189 Query: 175 TELTLRTLESR--TPLLRCHRQYLVNLAHLQEIRL----EDNGQAELILRN-GLTVPVSR 227 + L LES LR HR LV A L + +LR +PVSR Sbjct: 190 LDEALTHLESEFADRFLRLHRSVLVAKAALAGFEKAVVDDAEAYGWALLRGVPEKLPVSR 249 Query: 228 RYLKSLKEA 236 R + K Sbjct: 250 RQWAAAKAL 258 >UniRef50_D2QPM9 Two component transcriptional regulator, LytTR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QPM9_9SPHI Length = 254 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 119/254 (46%), Gaps = 24/254 (9%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 +++ I+DDE R + ++ + +VG NAV+ + + +++PD++FLD++MP + Sbjct: 3 ILRCYIIDDEAPNRALIEKYIHRLPSLTLVGSQDNAVDALLELPQVQPDLIFLDVEMPEM 62 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G E + +L P RP ++ +TA+ +YA+ FE DYL+KP+ R + + ++ +++ Sbjct: 63 TGFEFLRVL-PSPRPTVIMVTAYPQYAVDGFEHDVIDYLVKPVSFERFFRAVNKILAKQA 121 Query: 121 KQDVSLLPEN--------------QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT 166 S F ++ +++ + F+ S + + Sbjct: 122 STPGSPDVPALPSLAAPSETPTGVSDKDSFFLVKEDKKLVRVELDQIVFIESLKDYLKIY 181 Query: 167 SHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTV 223 G+ T +TL LE P +R +R Y++ ++EI ++ NG+ V Sbjct: 182 LP-GRTILTHMTLTRLEEMLPPDQFVRVNRSYIIRTGSIKEID-----GNTILTTNGMKV 235 Query: 224 PVSRRYLKSLKEAI 237 P+ Y + + + I Sbjct: 236 PIGVTYREEVMKKI 249 >UniRef50_Q5R0R5 Response regulator of the LytR/AlgR family n=1 Tax=Idiomarina loihiensis RepID=Q5R0R5_IDILO Length = 240 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 74/241 (30%), Positives = 124/241 (51%), Gaps = 13/241 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++V+IV+DE AR L L + +EIV EC++A + I ++ L+PD++ LDI++ +S Sbjct: 10 LRVIIVEDEAPARSKLNTQLAQMEGVEIVAECADAPQAIHDINSLKPDLVLLDIELGELS 69 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G +++ + H +++F TA+ +YA+KAFE+ A DYLLKP D +RL L R+ + + Sbjct: 70 GFDVLEAMK--HPCHVIFTTAYSQYAVKAFEKQALDYLLKPFDLSRLRHALERVVLAQPQ 127 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 + +I +LQ D+ FV + V E + + +L + Sbjct: 128 AAEPATVQ-------FTAKVGDKIRILQSSDIRFVRASQGLVVAQCLEREHHL-DDSLES 179 Query: 182 LESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKSLKEAIG 238 L ++ P LR HR +VN H+ +I NG L T+ SRR L++ + Sbjct: 180 LLNQLPSSFLRVHRNSIVNTQHIHQIEKWQNGALLLRFEGVNDTITTSRRGAAVLRKYLN 239 Query: 239 L 239 L Sbjct: 240 L 240 >UniRef50_Q04FG9 Response regulator of the LytR/AlgR family n=2 Tax=Oenococcus oeni RepID=Q04FG9_OENOB Length = 247 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 74/246 (30%), Positives = 135/246 (54%), Gaps = 11/246 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K+L+VDDEPLAR+ L L++ + V + + + + + + DV+F+DI + + Sbjct: 1 MKILVVDDEPLARDELSYLLKQNRLTDSVYQADSIGTAVDKLLQEKIDVIFIDISLNDEN 60 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR---Q 117 G ++ L H P IVF TAFD YA+KAF+ A DY+LKP +++R+ + L +++ + Sbjct: 61 GFQLANELKKLIHPPLIVFATAFDSYAVKAFDVDAVDYVLKPFEQSRVNQALEKVQAIFK 120 Query: 118 ERSKQDVSLLPENQ---QALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGF 174 ++K+D SL + + K I T + +++ D+ + + + + + G+ Sbjct: 121 LQAKKDNSLTVNSHFGSEKTKIISITSDDKTKIIKQHDLIMATIKDGALTLIT-NGQSYS 179 Query: 175 TELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLK 231 T +L L SR L+ HR +VN+ + E+ N +L L NG+ VPVSR ++K Sbjct: 180 TRQSLGWLLSRLNKNDFLQVHRSIIVNINSISELEPWFNHTYQLKLTNGMKVPVSRSFIK 239 Query: 232 SLKEAI 237 ++K+ + Sbjct: 240 AVKKRL 245 >UniRef50_A7T6N4 Predicted protein n=4 Tax=cellular organisms RepID=A7T6N4_NEMVE Length = 237 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 60/239 (25%), Positives = 112/239 (46%), Gaps = 12/239 (5%) Query: 3 KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 +IVDDEP+AR+ L F+++ +++V C NA+E ++ + D+ FLDI MP ISG Sbjct: 6 TCIIVDDEPIARDILISFIEKIPSLQLVKSCKNAMEAFEVINTEKVDLFFLDIHMPEISG 65 Query: 63 LEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSKQ 122 L + ++ + ++F TA+ YA++ F A DYLLKPI R + + + + Sbjct: 66 LSLAKIVPKSAK--VIFTTAYRGYAVEGFNLKAVDYLLKPIAFERFLEAVNKFFETNKSN 123 Query: 123 DVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRTL 182 L + F ++ + ++ F+ S + + E K T T+ + Sbjct: 124 TPVLEQIKNEQTNFFFVRSDRKMVRVNFAEILFIESVGDYIKIYLKE-KIIVTRETITNI 182 Query: 183 ESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIG 238 E++ +R HR ++ L ++ E + N +P+SR+Y ++ + Sbjct: 183 EAKLSHIDFIRTHRSFIAGLRFIESYTNEF------VEINKKAIPISRKYKDAVLNKLN 235 >UniRef50_A3YCL0 Response regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3YCL0_9GAMM Length = 273 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 82/272 (30%), Positives = 133/272 (48%), Gaps = 37/272 (13%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++V+I DDE L R+ LR +Q S +E+V EC N + + A+H L+PDV+FLDI MP I Sbjct: 3 LRVIIADDESLLRKELRELIQGFSALELVAECENGITTLEAIHTLKPDVVFLDIMMPGID 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER-- 119 GL++V + PE P +V++TAF+++A+ AFE A DYLLKPI E R EKT+ RL Sbjct: 63 GLKLVEHIQPEVMPKLVYITAFNQFAVNAFEVEAIDYLLKPISETRFEKTIDRLLAAMPI 122 Query: 120 -----------------------SKQDVSLLPENQQALKFIPCTGHSRIYL--------L 148 + Q S + + K +P + L + Sbjct: 123 RPETVSESVLYQSQVRSSDQAMTTVQTGSQASQMHRQSKTLPNPVSKTLVLDQKVPKTEV 182 Query: 149 QMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEI 205 +++D+A+V + + + K T++ L R R HR +VN +++ + Sbjct: 183 KLEDIAWVDAAGDYMCIH-ANQKTHILHSTMKALFKRLGQDQFCRIHRSTIVNKSYISKA 241 Query: 206 RLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 + G + L +G + +SR Y L + + Sbjct: 242 YPQSKGDYLVELVDGTQLRLSRTYQAVLADIL 273 >UniRef50_C6W0C7 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W0C7_DYAFD Length = 242 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 57/242 (23%), Positives = 117/242 (48%), Gaps = 12/242 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + + VDDEPLA + F+++ + + G NA++ + + K +++LDIQMP ++ Sbjct: 3 LNCITVDDEPLALGLVSSFVEQTPFLHLHGRYINALDALEVITKENIHLVYLDIQMPELT 62 Query: 62 GLEMVGML--DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 G+E+ +L +P+ R IVF TA++++A++ +E A YLLKP + T + ++ Sbjct: 63 GMELAKVLSQNPDTRTRIVFTTAYNQFAVQGYEVDALGYLLKPFGYNQFLATAMKAKKYF 122 Query: 120 SK-QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELT 178 ++ S PE + ++ ++ + + F+ S V + G + + Sbjct: 123 ENLREASNDPELDSSENYLFVKSDYKLVRIDFDAILFIESFKDYVRIHQANGSPVVSHSS 182 Query: 179 LRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKE 235 L+ +E + P +R HR ++V++ + I + + +PV Y + KE Sbjct: 183 LKAIEEKLPAGKFIRIHRSFIVSVGKVDSISKS------AVHIGSVDIPVGDLYKDAFKE 236 Query: 236 AI 237 + Sbjct: 237 LL 238 >UniRef50_C0INH2 Two-component system response regulator protein n=1 Tax=uncultured bacterium BLR12 RepID=C0INH2_9BACT Length = 230 Score = 226 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 63/239 (26%), Positives = 118/239 (49%), Gaps = 16/239 (6%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MIK +IV+DE LA+ ++ +Q+ E+VG CSNA+E + K D++FLDIQ+P + Sbjct: 1 MIKCIIVEDEVLAQHVIQSHVQQTGKFELVGTCSNALEAKEVLDKKEVDLIFLDIQLPGM 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SGL + L P +V TA+ EYA++++E + DYLLKPI R K + ++ R Sbjct: 61 SGLNFLRTL--ATPPLVVLTTAYPEYALESYEFNVIDYLLKPISFERFSKAVNKIVDGRL 118 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + + I +++ + + ++ ++ + + + E + T T+ Sbjct: 119 FTQKESIEQAG----HIFIKSNNKFFKVNFSEIIYIEGMKDYLKIYTAEYR-LVTHQTMS 173 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEA 236 +E P +R H+ Y+V LA+++ + + + G +P+ Y ++ Sbjct: 174 EMEKILPSKQFMRVHKSYIVALAYVRSV-----SGNSIETQKGT-IPIGNVYKDNMMNF 226 >UniRef50_C0Z807 Two-component response regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z807_BREBN Length = 261 Score = 226 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 70/246 (28%), Positives = 124/246 (50%), Gaps = 9/246 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K +I+DDEP L L++ DI++ +N +E + + PD+L LDIQMP ++ Sbjct: 17 LKTIIIDDEPAICSELEYLLKKYIDIQVDAIYTNPLEALPHMLNSEPDLLMLDIQMPGMN 76 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GLE L+ + P IVF TA+ E+A++AF A YL KPI E++L+ + ++R R Sbjct: 77 GLEFAKTLNQMSNPPLIVFSTAYHEHALEAFSTLAVGYLTKPIMESKLDDVIQKVRTLRK 136 Query: 121 KQDVSLLPENQQ-ALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 + ++ + + ++I + + + F R +YV + E + +L+L Sbjct: 137 RAAMNDRTATVPLMEEHVCIRKSNKIIPIPVGQIYFAFVREKDLYVATKESID-KCDLSL 195 Query: 180 RTLESRTP----LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT--VPVSRRYLKSL 233 LE R HR Y++N+ H++EI N + + + +PVSR +K+ Sbjct: 196 NELEEILNRSRSFFRSHRNYILNVKHIKEIIPWFNHTYLIKMNDDSQTDIPVSRGRMKAF 255 Query: 234 KEAIGL 239 + + L Sbjct: 256 RGLMNL 261 >UniRef50_C7MZZ5 Response regulator of the LytR/AlgR family n=3 Tax=Actinomycetales RepID=C7MZZ5_SACVD Length = 255 Score = 226 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 76/240 (31%), Positives = 118/240 (49%), Gaps = 9/240 (3%) Query: 5 LIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGLE 64 L VDD P A ++L L+E ++ V + V + + D +FLDI MP + GLE Sbjct: 2 LAVDDVPAALDDLCGMLREAPEVAEVAAAGDTVAALKRLQSEEFDAVFLDIAMPGLDGLE 61 Query: 65 MVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSKQD 123 +L P IVF+TA+D++A+ AF A DYLLKP+ RL LAR+ + S + Sbjct: 62 FASLLKKLARPPAIVFVTAYDQHAVAAFGIGAVDYLLKPVRAERLADALARVSRIVSTEK 121 Query: 124 VSLLPENQQALK---FIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 P+ Q A +P R ++ +DV +V + V + +H G + + Sbjct: 122 AGKTPQRQPAPDALAALPVESGGRTRYVRRQDVRYVEAHGDYVRLHTHSG-VHLVRMPIS 180 Query: 181 TLES---RTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 LE +R HR +LV L+ ++E+R + G G VPVSRR+ + L+E + Sbjct: 181 RLEEYWANAGFVRTHRGFLVALSAVRELRSDSVGGLLAHTDLGD-VPVSRRHARHLRERL 239 >UniRef50_C7PS97 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PS97_CHIPD Length = 244 Score = 226 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 61/246 (24%), Positives = 121/246 (49%), Gaps = 17/246 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ LIVDDEPLA E + ++++ ++ G+C A+E + + + D++FLDI+MP+++ Sbjct: 3 LRCLIVDDEPLAHEVILRYMEDVPFLQTAGQCYRAMEALEFLSRQPVDLIFLDIRMPKLN 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL------ 115 GL+ + L + P ++ +A++E+A+++FE DYLLKP R K R Sbjct: 63 GLDFLRTLQQQ--PIVIITSAYEEHALESFELEVCDYLLKPFRFDRFLKAANRALSIYNL 120 Query: 116 RQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFT 175 +Q+ + + ++ L +++ + S + V V + T Sbjct: 121 KQQAGNNTPVAVSATPTEPAALYIKSDKKLIQLNPEELYYFESLGNYVKVWDA-SRFVLT 179 Query: 176 ELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKS 232 TL + ES+ P +R H+ Y++N ++ + + L+NG +P+ + Y Sbjct: 180 PRTLSSFESQLPADTFIRIHKSYILNKKFVRYLE-----GNTITLKNGKQLPLGKNYKHQ 234 Query: 233 LKEAIG 238 +K +G Sbjct: 235 VKLLLG 240 >UniRef50_Q7P1K6 Probable two-component system, regulatory protein n=1 Tax=Chromobacterium violaceum RepID=Q7P1K6_CHRVO Length = 242 Score = 226 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 72/246 (29%), Positives = 114/246 (46%), Gaps = 20/246 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ L+VDDE LA + LR L +E V ++ + + + DVL LDI MP + Sbjct: 7 LRALVVDDEALACDRLRQLLA-DCGVEQVDCLADGQAALDWLARHPVDVLLLDISMPGLD 65 Query: 62 GLEMVGMLDPEH-RPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 G+ + L + P +VF TA D +A++AFE A DYLLKP+ RLE+ L R R Sbjct: 66 GISLARQLRQQALAPALVFSTAHDHFAVEAFELDAADYLLKPVRRERLEQALRRALARRQ 125 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 Q R+ + D ++ + + V + + + E + L Sbjct: 126 ----------GQPQTSFTVRQRGRLLNVPFADARYLKAELKYVTLVTPD-SEYLLDDALV 174 Query: 181 TLESRTP--LLRCHRQYLVNLAHLQEI----RLEDNGQAELILRN-GLTVPVSRRYLKSL 233 LE R LR HR LV +QE+ + + Q + LR+ +PVSRR + +L Sbjct: 175 ALEQRLGDSALRIHRNCLVMRHAVQELCRGGENDGDEQWIVRLRDIPAPLPVSRRQIHAL 234 Query: 234 KEAIGL 239 + A+ + Sbjct: 235 RAALSV 240 >UniRef50_A1ZK58 Two-component system response regulator protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZK58_9SPHI Length = 245 Score = 226 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 66/247 (26%), Positives = 118/247 (47%), Gaps = 19/247 (7%) Query: 1 MI-KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 M+ K +I+DDEPLARE L ++Q+ +++ +A+E +H D++FLDI+MPR Sbjct: 1 MLYKCIIIDDEPLARELLEGYVQQVPFLQLEQVFPSAIEASLTIHSQTIDLIFLDIEMPR 60 Query: 60 ISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +SGL+ + L P I+F TA+ EYA+ AF + DYLLKPI+ R + + ++ + Sbjct: 61 LSGLDFLRNLKQ--PPAIIFTTAYAEYALNAFNLNVVDYLLKPIEFNRFFQAVNKVIKSV 118 Query: 120 SKQDVSLLPEN------QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 + P ++ + +I + +D+ F+ V + + Sbjct: 119 PQTITPPEPHQATLETTKEDEAYFFIKTDQKIVKVLTQDILFIEGLQKYVKIHLPN-EIL 177 Query: 174 FTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYL 230 + +L L + P R HR Y++N+AH+ I+ I +P+S+ Sbjct: 178 ISLTSLSHLLEKLPSDSFTRIHRSYIINIAHIDSIQ------GNTITIQKHHLPLSQGNR 231 Query: 231 KSLKEAI 237 + + I Sbjct: 232 SAFYDLI 238 >UniRef50_A1ZQ18 Transcriptional regulator protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZQ18_9SPHI Length = 248 Score = 226 bits (577), Expect = 5e-58, Method: Composition-based stats. Identities = 69/246 (28%), Positives = 127/246 (51%), Gaps = 13/246 (5%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQ-SDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 M+K LI+DDE AR L+ L+E IEIVGE + + A+HK +P+++FLDI+MP Sbjct: 1 MLKALIIDDEAKARRILQELLKEYCPQIEIVGEADDVPNAVKAIHKYQPNLVFLDIEMPG 60 Query: 60 ISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +G +++ D I+F TA+ EYAI+AF+ A DYLLKPI L K + ++ + Sbjct: 61 YTGFQLLDFFDT-INFEIIFTTAYREYAIQAFQVSAIDYLLKPIQIELLIKAIEKVEGQL 119 Query: 120 SKQDVSLLPEN------QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 S+ ++ + Q+ + I + +++ + ++++ + + GK+ Sbjct: 120 SEPQINERIDTLKSNLSQEYITRIALPVAEGLLFIEVDQIVYLNAEGAYTQIFLEGGKKV 179 Query: 174 FTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYL 230 +++ E R HR YL+NL +++ +D G +++ N +V ++R Sbjct: 180 LVSKKIKSFEKVLDHPSFFRTHRSYLINLNRVKQYVRQDGG--YIVMDNNDSVNLARERK 237 Query: 231 KSLKEA 236 + +A Sbjct: 238 EDFLKA 243 >UniRef50_A6ER53 Putative two-component system response regulator n=2 Tax=Bacteroidetes RepID=A6ER53_9BACT Length = 228 Score = 226 bits (577), Expect = 5e-58, Method: Composition-based stats. Identities = 61/238 (25%), Positives = 114/238 (47%), Gaps = 18/238 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K ++VDDE LARE ++ ++++ + +E V + +E + + + D+LFLDIQMP I Sbjct: 4 LKCIVVDDEELARELIKTYIEKLNHLECVATYESPLEALATIKSSKIDLLFLDIQMPDIK 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E +++ + I+F TA+ EYA+K++E +A DYL+KPI R + + Sbjct: 64 GTEFAELIN-NTKTRIIFTTAYSEYALKSYELNALDYLVKPISFKRFLNAVEKF------ 116 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 + I ++ + +D+ ++ S V G + +L Sbjct: 117 ---PITETANVIDHKIIIKSGYELHKVLTEDIIYIESDSEYVNYHLTNGNKIMANQSLSK 173 Query: 182 LESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 L + P LR HR Y++N + ++ D ++ + + +PVS Y +K + Sbjct: 174 LATSLPEHFLRVHRSYIINTQKVTGLKARD------LMLSDIKIPVSDSYFDIVKSTL 225 >UniRef50_D2QR47 Two component transcriptional regulator, LytTR family n=2 Tax=Flexibacteraceae RepID=D2QR47_9SPHI Length = 260 Score = 226 bits (577), Expect = 6e-58, Method: Composition-based stats. Identities = 78/258 (30%), Positives = 140/258 (54%), Gaps = 22/258 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSD-IEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 +K +++DDE LA LR L + D I+IVG+ N EG+ + L+PD++FLDI+MP + Sbjct: 5 LKTILIDDESLAVSRLRRLLGKHHDSIDIVGDAGNGAEGLTLIESLQPDLIFLDIEMPLL 64 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G EM+ L P +VF TAFD+YAI+AFEE++ DYLLKPI+ RL +T+ ++R Sbjct: 65 NGFEMLSRLT--TMPMVVFATAFDQYAIRAFEENSIDYLLKPIEAERLARTIQKIRTLVE 122 Query: 121 KQDVSLLP---------------ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYV 165 + + + + ++ + I +I L+ + D+A+ + V++ Sbjct: 123 RAEGAYPVMNPMSESVMRLLAQMQPKKEIYSISVKTGEKIKLIPLSDIAYFEAEDKYVFL 182 Query: 166 TSHEGKEGFTELTLRTLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN--GL 221 ++ +G++ T TL TL+ + P +R R +VN + E+ +G+ L + + G Sbjct: 183 STIDGQKFLTTYTLTTLDEKLPDTFVRISRSVMVNRHKISEVHRHFDGKFILAVSDKKGT 242 Query: 222 TVPVSRRYLKSLKEAIGL 239 + Y ++++ + L Sbjct: 243 RLTSGSTYSDAIRQLLEL 260 >UniRef50_Q3BTS0 Two-component system regulatory protein n=2 Tax=Xanthomonas RepID=Q3BTS0_XANC5 Length = 240 Score = 225 bits (576), Expect = 6e-58, Method: Composition-based stats. Identities = 69/241 (28%), Positives = 113/241 (46%), Gaps = 11/241 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ +IV+D LAR L L+ + ++G + + + PDV+FLDI +P + Sbjct: 8 IEAVIVEDSELARFELEHQLKGYPQLRVLGHADDVDSAVQLIESATPDVVFLDIDLPGGN 67 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 +++ L P I+F TAFD +A+KAF + DYLLKPI+ RL + + +L Sbjct: 68 AFDVLERLSR--VPRIIFTTAFDAHALKAFGYNTVDYLLKPIEPQRLAQAIEKLGD---- 121 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 V+ P + I +L++ +DV + + + V L Sbjct: 122 -AVAAPPVRRAMDSAIFIKDGEHCFLVKPRDVRLIEAVGNYSRVYFQNHAPLLYR-PLGA 179 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIG 238 +E++ R R+Y+VNL ++++ NG L LR GL V VSRR +E + Sbjct: 180 IETQLAPDKFFRASRKYIVNLDFVEQVAPWSNGGLMLTLRGGLEVEVSRRQSARFRELLS 239 Query: 239 L 239 L Sbjct: 240 L 240 >UniRef50_B9TLS0 Positive alginate biosynthesis regulatory protein, putative n=2 Tax=Ricinus communis RepID=B9TLS0_RICCO Length = 238 Score = 225 bits (576), Expect = 8e-58, Method: Composition-based stats. Identities = 81/240 (33%), Positives = 131/240 (54%), Gaps = 5/240 (2%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +++LIVDDE AR LR L +Q I+ V E ++ ++ + + RPD L LDI+MP +S Sbjct: 1 MRLLIVDDERPARAKLRHLLAQQDGIDAVEEAADGIDALERIASFRPDALLLDIEMPELS 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+E+ L PE P +VF+TA++ YA +AF+ A DYLLKP D RL + LARLR++ + Sbjct: 61 GIELAASL-PEPAPLVVFVTAYERYACQAFDCDAIDYLLKPYDGDRLARALARLRKKLAA 119 Query: 122 Q-DVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + D L+ + + ++++ D+ ++ + + V + + G TL Sbjct: 120 KVDGRPAALPPAPLEQLLVSERGVTRVVRVADIQWIETADNYVVLHTAAGSP-LLRQTLA 178 Query: 181 TLESRT--PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIG 238 L R +RCHR+ +A ++ + D G EL+LR G VP SR+Y + +G Sbjct: 179 GLVDRLGAGFVRCHRRAAAQVAWIERVVTLDKGDGELLLRGGARVPCSRQYRADVLARLG 238 >UniRef50_C6VU69 Two component transcriptional regulator, LytTR family n=2 Tax=Sphingobacteriales RepID=C6VU69_DYAFD Length = 235 Score = 225 bits (575), Expect = 8e-58, Method: Composition-based stats. Identities = 65/243 (26%), Positives = 114/243 (46%), Gaps = 16/243 (6%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M++ +I+DDEPLAR L FLQ+ S I +NA + + + DVLFLDI+MP + Sbjct: 1 MLQCVIIDDEPLARGILEEFLQK-SGITGAASFANARDALAHLQTHETDVLFLDIEMPEM 59 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G++ + L P VF TA+ YA + +E D+LLKPI AR L ++R Sbjct: 60 NGIDFLKSLAQ--PPVTVFTTAYRGYAFEGYELGVIDFLLKPISYARFGHALDKVRDFLQ 117 Query: 121 KQDVSLLPEN---QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL 177 ++ + E ++ FI + L D+A++ + + GK + Sbjct: 118 LKEQNTNLEQNLTEEKPDFIFVKSGVQRVRLAFDDIAYIQGLKDYAIIHTGAGK-VVIKG 176 Query: 178 TLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLK 234 +++ + P LR H+ ++V + ++ I I+ +P+ R Y + + Sbjct: 177 SVKAMLEIFPPARFLRVHKSFIVGIDKIRRIERNR------IVWGNHQIPIGRNYREEVM 230 Query: 235 EAI 237 + I Sbjct: 231 QVI 233 >UniRef50_C7PA86 Two component transcriptional regulator, LytTR family n=8 Tax=Bacteroidetes RepID=C7PA86_CHIPD Length = 235 Score = 225 bits (575), Expect = 9e-58, Method: Composition-based stats. Identities = 67/239 (28%), Positives = 123/239 (51%), Gaps = 17/239 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ +I DDEP AR+ L+ ++ + +E+V C +AVE + K + D+LFLDI+MP +S Sbjct: 3 IRCVITDDEPYARKGLQGYISQIDFLELVAVCESAVELNTFLKKEQVDLLFLDIEMPYLS 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+E++ L H P ++F TA+++YA++ +E DYLLKPI R + + + Sbjct: 63 GIELLKTL--AHPPKVIFTTAYEKYAMQGYELEVLDYLLKPISLDRFLRAANKAFDYFNL 120 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 Q + + + S++ + ++D+ F + + + + + K+ T LTL+ Sbjct: 121 Q-----EQVKPREDYFFIKVDSKLEKVLVEDILFAEGMENYITIHTKQ-KKMITHLTLKM 174 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 L+ P ++ H+ Y+ + + I ++L G VPVSR + + E I Sbjct: 175 LQEHLPADKFIQPHKSYIAAIDKIDAIE------GNVLLLGGYQVPVSRYQKEEIMERI 227 >UniRef50_C6IC21 Two-component system response regulator n=14 Tax=Bacteroidetes RepID=C6IC21_9BACE Length = 232 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 63/240 (26%), Positives = 119/240 (49%), Gaps = 18/240 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ IVDDEPLA L ++ + +E+ G+ S+AV+ + + + D+LFLDIQMP ++ Sbjct: 3 LRCAIVDDEPLALSLLESYVNKTPFLELAGKYSSAVQAMKELPGNQIDLLFLDIQMPELN 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GLE M+ P R IVF TAF +YAI + +A DYLLKPI + + Q Sbjct: 63 GLEFSKMVSP--RTRIVFTTAFGQYAIDGYRVNALDYLLKPISYVDFLQATNKALQWFE- 119 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEG-KEGFTELTLR 180 L + + + I ++ +++K + ++ + + + + K + ++++ Sbjct: 120 -----LVQKPEEVDSIFVKSDYKLVQVELKKILYIEGLKDYIKIYTEDAPKPILSLMSMK 174 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 ++E P +R HR ++V ++ I I+ + +PVS Y ++ + + Sbjct: 175 SMEELLPPARFMRVHRSFIVQKDKIRIIDRGR------IVFDKTYIPVSDSYKQTFQTFL 228 >UniRef50_C6Y3C9 Response regulator receiver n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6Y3C9_PEDHD Length = 242 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 71/240 (29%), Positives = 126/240 (52%), Gaps = 10/240 (4%) Query: 4 VLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGL 63 VL++DDE R ++ +L+ +D + GECSN +E + ++ L PD++FLDIQMP +G Sbjct: 6 VLVIDDEDHGRVLVKQYLEPYADFFVAGECSNGIEAVKFINMLEPDLIFLDIQMPGANGF 65 Query: 64 EMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE---RS 120 E++ + +H P ++F TAFD+YAI+AFE + DYLLKP + R ++T+ARL+ + Sbjct: 66 EVLQRI--DHVPDVIFTTAFDKYAIRAFEINVIDYLLKPYTKERFDQTMARLKSKPAALP 123 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + + + I R + + D+ ++ + + + E + + Sbjct: 124 QLAMGTFSSPHSYPERIMVEHQKRFKNISVHDIMYLKADGDYTRIYTEE-TSFLSSFGIS 182 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 + + +R HR ++NL ++QE+ + L+L NGL + R YL +K I Sbjct: 183 VIAQKFDPAKFVRIHRSVIINLDYVQELYRDIGKTY-LVLDNGLEFNIGRSYLPVIKSFI 241 >UniRef50_C6W312 Two component transcriptional regulator, LytTR family n=4 Tax=Flexibacteraceae RepID=C6W312_DYAFD Length = 240 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 120/245 (48%), Gaps = 16/245 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K ++VDDEP A E L +L ++IE+ C +A++ + + + D++FLD++MP + Sbjct: 3 LKAILVDDEPHAIEILDNYLANFAEIEVAARCQDAIQAFQVLQQQKIDLMFLDVKMPGLK 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G +++ L + P +VF TA+ +YA++ F+ +A DYLLKPI R + + ++ + Sbjct: 63 GTDLLRSLK--NPPKVVFTTAYQDYAVEGFDLNAVDYLLKPIPFERFLRAMDKVFTGLNI 120 Query: 122 QDVSLLPENQQALK----FIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL 177 + S+ + A F+ ++ + + D+ ++ S + V + K ++ Sbjct: 121 TNQSVSVAQKAAQATQDVFLYLKVDRKMVKVNVNDIYWIESLRDYIKVVLKD-KALISKQ 179 Query: 178 TLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLK 234 + LE P +R HR ++V++ ++ + +G +P+ R + + Sbjct: 180 KISLLEELLPEDGFIRIHRSFIVSVDKVESYHSHK------LEIDGKELPIGRNFRNDCQ 233 Query: 235 EAIGL 239 L Sbjct: 234 RRFKL 238 >UniRef50_C1ACS0 LytT family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1ACS0_GEMAT Length = 231 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 59/240 (24%), Positives = 110/240 (45%), Gaps = 18/240 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ LI++DEPLA E L ++ + +++VG NA + + + D+LFLDI + ++ Sbjct: 1 MRCLIIEDEPLAAERLTDYIAKLPLLQLVGTFDNATDAMSWLLANPVDLLFLDISLGGMT 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+E++ + ++ TA E+A+K ++ DYLLKPI R + + R + R Sbjct: 61 GIELLETMTVHG--QVILTTAHPEFALKGYDLKVADYLLKPITFQRFVQAVERAQTLR-- 116 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 + + FI R+ +++ D+ ++ + + + K T TL Sbjct: 117 ----PVVDAPAERGFIFVRTEFRLEKVRLADILYIEGDGDYRQIHTTQ-KRLTTAETLTE 171 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIG 238 LE+R P + R H+ Y+V L ++ + + +PVS Y IG Sbjct: 172 LEARLPVDRICRVHKSYMVALDRIEAVERDRLS------IRDKLIPVSATYRDRFYALIG 225 >UniRef50_C7PNX8 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PNX8_CHIPD Length = 231 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 53/239 (22%), Positives = 104/239 (43%), Gaps = 16/239 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ + +DDE A + + F E I++ + + + + K D+LFLDI MP ++ Sbjct: 3 IQAIAIDDELPALKLIENFCSEVEGIQLQKTFNVPADALKHIGKYPVDLLFLDINMPSVT 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G + L E ++F TA EYA++ F +A DYLLKP R ++ + + +Q Sbjct: 63 GTDFYRSLQQEA--MVIFTTAHAEYAVEGFNLNAVDYLLKPFTFERFQQAVQKAQQLIQS 120 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 + + + +Q+ ++ F+ + + H+ +T++ Sbjct: 121 RHTQPAATPP-----LVFRVDYGLTRVQLNEILFIEGLDDYLKIHLHQQAPLIVRMTMKA 175 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 L + P +R HR ++V L ++++ + + I G +PVS Y + Sbjct: 176 LLEKLPPQSFIRVHRSFIVALDRVEQV------RNKTIHIAGHEIPVSSSYETAFFSQF 228 >UniRef50_D2QI00 Two component transcriptional regulator, LytTR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QI00_9SPHI Length = 235 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 122/239 (51%), Gaps = 12/239 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ L++DDE A L+ ++++ + +VG C +A+E I +H+ D+LFLDI MP+++ Sbjct: 5 LRCLLIDDEAAAHYVLQHYIEQVDRLTLVGNCYHALEAINFLHRQPIDLLFLDINMPQMN 64 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL+M+ L H P ++ TA E+A++++ + DYLLKPI+ AR K + ++ +S Sbjct: 65 GLQMLETLT--HPPRVILTTAHSEFALESYNYNVVDYLLKPIEFARFLKAVDKVVVTQSD 122 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 ++ L A L D+ +V S + V + + + T LT+ Sbjct: 123 EETQPLSLLTPAGASFVIKVDGDWVRLAYSDLLYVQSWGNYVKLFTTN-QIYVTALTMTE 181 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 LE R P +R H+ YLV L ++ + + + + ++P+ Y + L E + Sbjct: 182 LEQRLPAEQFIRIHKSYLVALHSIKRLSGNE------VFISETSLPIGSTYRRELVERL 234 >UniRef50_C7PMC2 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PMC2_CHIPD Length = 258 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 63/254 (24%), Positives = 114/254 (44%), Gaps = 22/254 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 IK +IVDDE + L+ LQ+ ++ ++G ++ E + +L+PDV+FLD++MP Sbjct: 4 IKAIIVDDEQHCIDALQTMLQKKCPEVTVLGGVNSVKEAKELITELQPDVVFLDVEMPHQ 63 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G E++ M D ++F TA+++YA+KA + +A DYLLKP L+ + + RS Sbjct: 64 NGFELLKMFDKIT-FDVIFTTAYEQYALKAIKFNALDYLLKPFSVKELQDAIQKCIARRS 122 Query: 121 KQDVSLLPEN---------------QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYV 165 + PE Q K I + + + ++++ S + + Sbjct: 123 SNTGNGQPEMTTSPIEVFLQNMKTLHQTHKKIALPTINGLVFMPVQNIVRCESTGNYTRI 182 Query: 166 TSHEGKEGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT 222 + K L+ E R H +L+NL +Q + G ++ +G Sbjct: 183 FFTDKKNLMVSRPLKEFEELLTDVDFFRVHNSHLINLQQMQSYIQGEGG--FALMSDGTQ 240 Query: 223 VPVSRRYLKSLKEA 236 V +SRR + Sbjct: 241 VEISRRRKADFLKK 254 >UniRef50_A8UEA9 Two-component system response regulator n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UEA9_9FLAO Length = 234 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 68/240 (28%), Positives = 121/240 (50%), Gaps = 12/240 (5%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 +++ +I DDEP+AR+ L ++ E +E+ C NA E + + K + D+LFLDI MP++ Sbjct: 3 ILQCIIADDEPIARQILENYINEIPYLELKASCKNAFEVLEILQKEQIDLLFLDINMPKL 62 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SGL M+ L +P ++ TA+ EYA++ FE DYLLKP R + + +++Q+ Sbjct: 63 SGLSMLRTLQQ--KPNVIITTAYPEYALEGFELSVTDYLLKPFSIERFLQAVMKVQQKHD 120 Query: 121 KQDVSLLPENQQALKF-IPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 + + + + I +I L + ++ + + + + S K T TL Sbjct: 121 NSVKETITNSIEEEQISIFVKSDKKIIKLDFDAIFYIEAYGNYIKIFS--DKMVLTPQTL 178 Query: 180 RTLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 + P LR H+ Y VN HL+ I +++L N +P+ + Y K++ + I Sbjct: 179 SDFIDKLPNNFLRVHKSYAVNFNHLKLID-----GNQIVLSNNAKLPIGKSYRKAILKKI 233 >UniRef50_A1ZS31 Two-component system response regulator n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZS31_9SPHI Length = 243 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 53/242 (21%), Positives = 118/242 (48%), Gaps = 16/242 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K + +DDE +A E +R Q+ IE++ NA+E I + + D++FLDI MP I+ Sbjct: 4 LKCIAIDDEFMALEVIRHHSQKIPFIELLACFENAIEAIAFLQQHEVDLVFLDINMPDIT 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL+++ + +P +VF TA+ EYA++ ++ + DYLLKPI+ +L K + + + Sbjct: 64 GLQLLKSIT--CQPVVVFTTAYAEYALQGYDFYTVDYLLKPIEFDQLLKAVNKAQHFLQT 121 Query: 122 QDVSLLPENQQALKFIP----CTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL 177 Q + + I ++I+ ++ ++ ++ S + V + ++ + Sbjct: 122 QKTAPTAQVSTPSTHISDTILVKSGTQIHQIKTAEILYIESTGNYVKFVTPH-QQVMSLF 180 Query: 178 TLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLK 234 +++ + P ++ H+ ++V H+ + N +P+ + Y ++ + Sbjct: 181 SMKEVIELLPAQDFVKIHKSFIVAFRHISLFEKHQ------VKINDQPIPIGKTYREAFQ 234 Query: 235 EA 236 + Sbjct: 235 QI 236 >UniRef50_D2QJ93 Two component transcriptional regulator, LytTR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QJ93_9SPHI Length = 224 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 119/241 (49%), Gaps = 20/241 (8%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+ L+V+DEPLAR+ + ++ + +D+ +V C++A E + D++FLDI++P + Sbjct: 1 MMNCLVVEDEPLARQVVETYIHQSADLRLVKSCTHAFEAFEVLTAYPVDLMFLDIELPSL 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G++ + L P ++F TA+ +YA++++E A DYLLKPI R ++++ + + + Sbjct: 61 TGIDFIRRLKQ--PPALIFTTAYSDYAVESYELEAVDYLLKPITYERFKQSVDKFFKRTA 118 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + ++ L+ D+ + S + + + E + LT++ Sbjct: 119 PPPTAATYS--------YFKVDGQLVKLEHGDIVYAQSIKDYILLKTAE-RSFIVHLTMK 169 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 L P R HR YLVNLAH+ ++ +D + L P+ Y L + + Sbjct: 170 GLSELLPEGQFRRIHRSYLVNLAHVTKVSRQDIQLGAITL------PIGESYRGLLNDFL 223 Query: 238 G 238 Sbjct: 224 N 224 >UniRef50_B0RWJ0 Transcriptional regulator protein n=11 Tax=Proteobacteria RepID=B0RWJ0_XANCB Length = 258 Score = 222 bits (567), Expect = 7e-57, Method: Composition-based stats. Identities = 68/254 (26%), Positives = 121/254 (47%), Gaps = 22/254 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQ-SDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 ++ +I +DE L R++L L E +++V EC + + + +PDV+FLDI+MP + Sbjct: 4 LRAVIAEDEALLRQSLLALLAEVCPQLQVVAECEDGASALDTIATQQPDVVFLDIRMPGL 63 Query: 61 SGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +G+E+ + R +VF+TA+D+YAI AFE+ A DYLLKPI+ RL+ T R++Q Sbjct: 64 TGIEVARAMREVSPRTQVVFVTAYDQYAIDAFEQGAVDYLLKPINRERLQATWQRVQQRA 123 Query: 120 SKQDVS---------------LLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVY 164 + L ++ + L+ + +VA+ + Sbjct: 124 AAGQPDGAMLESLLQRLAARPAAASAPPPLAWLTASSGRETRLIALDEVAYFQADQKYTT 183 Query: 165 VTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-G 220 V + G+ LR L + HR +VN+ + + +D+G+ L LR Sbjct: 184 VMTAAGEAIL-RTPLRELLDVLDPHVFKQIHRSTIVNMKAVASVVRDDSGKGRLALRGRS 242 Query: 221 LTVPVSRRYLKSLK 234 T+ VS+ ++ + Sbjct: 243 ETLTVSQPFMSLFR 256 >UniRef50_A4CHH8 LytTr DNA-binding domain family protein n=5 Tax=Flavobacteriales RepID=A4CHH8_9FLAO Length = 244 Score = 221 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 65/248 (26%), Positives = 119/248 (47%), Gaps = 15/248 (6%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSD-IEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 M++ +IVDDE A ++L+ L S+ I +V ++A + + + +PD LFLDI+MP Sbjct: 1 MLEAVIVDDEEKALQSLQWELTNFSNEISVVASFTDAYKALSYLDSNQPDCLFLDIEMPS 60 Query: 60 ISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 + G + + + +V TA+++YAIKA + A DYLLKPID L T+ ++R+ Sbjct: 61 MDGFQFIQKM-QNSDVAVVITTAYNQYAIKALKNEAIDYLLKPIDSDDLADTITKIRKHH 119 Query: 120 SKQDVSLLPEN-------QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 ++ + E + K I + ++ L+ D+ + S + + +G + Sbjct: 120 ARGMSAERLERILLNHNATSSHKKITLSTDGKLVFLENDDIIYAESDGNYSTIYLSDGHK 179 Query: 173 GFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRY 229 L+ + P R H +++NL ++E D +IL+ +PVSR+ Sbjct: 180 IVLTKKLKEVGELLPSDTFFRIHNSFIINLNKIKEFLKTDGY---VILKPNHKIPVSRQK 236 Query: 230 LKSLKEAI 237 + I Sbjct: 237 KSDFLDMI 244 >UniRef50_C6XVI3 Response regulator receiver n=2 Tax=Sphingobacteriales RepID=C6XVI3_PEDHD Length = 245 Score = 221 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 62/238 (26%), Positives = 113/238 (47%), Gaps = 18/238 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ LIVDDEP A E ++ + +IEIV C+NA++ + V + D++FLDI+MP ++ Sbjct: 3 IRTLIVDDEPHALEIIKKYAVNVPEIEIVDTCNNALKALQFVQHTKIDLVFLDIKMPGLT 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G +++ L P I+F TA+ EYAI FE +A DYLLKP+ R + + ++ Q + Sbjct: 63 GTDLIRGLK--TPPMIIFTTAYQEYAIDGFELNAIDYLLKPVPLERFLRAIDKVMQFING 120 Query: 122 QDVSLLPENQQ------ALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFT 175 + + F+ ++ + +D+ ++ S + V + + K T Sbjct: 121 DKNRRHLKEPEGLATAAPTHFLYLRIERQLVKVDTRDILWIESVKDYIKVVTTD-KTFQT 179 Query: 176 ELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYL 230 + + E P +R HR +++ + ++ G +P+ R Y Sbjct: 180 KQKISIAEKLLPIGEFMRIHRSFIIPVNKTDAYHPNY------MIIAGNKIPIGRNYK 231 >UniRef50_Q1YSU3 Two-component system regulatory protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YSU3_9GAMM Length = 239 Score = 221 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 75/241 (31%), Positives = 124/241 (51%), Gaps = 9/241 (3%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MIKVLIVDDE LAR L+ L ++SDIE+VGE N +E + H+ PD++ +D++MP + Sbjct: 1 MIKVLIVDDESLARIRLQRLLGKKSDIELVGEARNGLEAVQMAHQYLPDIVLMDVRMPEM 60 Query: 61 SGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 GLE + P ++F TAF+++A++AF+ AF YLLKPI + L+ L R Sbjct: 61 DGLEAARQIAKMIPPPAVIFCTAFEDFALRAFDAKAFAYLLKPIKDNELDAALQRAASAT 120 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 Q + + + H+ + L+ + + + + V + EG+ ++ TL Sbjct: 121 RAQLNG---QTPSHRRHLCSRTHNGLELVAAEHIRLLQADQKYVTAYTAEGETLLSD-TL 176 Query: 180 RTLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVP-VSRRYLKSLKEA 236 + +E +R HR LV ++ + G + LR+ P VSRR L++ Sbjct: 177 KDIEKEFSQFFVRVHRSALVARDAIEGL-TYAEGHLAVKLRDIAIQPIVSRRLEPKLRQL 235 Query: 237 I 237 + Sbjct: 236 L 236 >UniRef50_Q21DS4 Response regulator receiver n=2 Tax=Alteromonadales RepID=Q21DS4_SACD2 Length = 261 Score = 221 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 75/261 (28%), Positives = 121/261 (46%), Gaps = 27/261 (10%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I +IVDDE AR+ L+ L +I I+ +C N + AVH+L P V+FLDI MP++ Sbjct: 3 INAIIVDDEAHARQALQHLLGTYKEINIIAQCENGKTAVKAVHELEPQVMFLDIHMPKLD 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G E++ +L + P VF+TA D+YAI+AFE +A DYLLKP+ E RL +T+ R+ Q + Sbjct: 63 GFEVLELLG-DAAPITVFITAHDDYAIQAFENNALDYLLKPVSEERLARTVERICQRIKE 121 Query: 122 QDVSLLP------------------ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGV 163 +++ P + Q + + ++++ ++ + + V Sbjct: 122 ANLTAQPNPEGEQSQRTTDVVQNYIQRQAPIGRVLVRDKGDVHVISTTNIIAIEAADDYV 181 Query: 164 YVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG 220 + G + L LE R HR ++NL +LQ I E L+ Sbjct: 182 VIHVPGG-THIKQERLSRLEELLDPQQFCRIHRSTIINLDYLQGIETEGKDTRFANLKTP 240 Query: 221 L----TVPVSRRYLKSLKEAI 237 +SR L E + Sbjct: 241 EGEQKQFAISRGGYGKLIEVL 261 >UniRef50_C5ETQ4 Sensory transduction protein lytT n=5 Tax=Clostridiales RepID=C5ETQ4_9FIRM Length = 255 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 57/257 (22%), Positives = 107/257 (41%), Gaps = 21/257 (8%) Query: 2 IKVLIVDDEPLARENL-RVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 +K+ ++DDE +R+ L L D I E + + + D+LF+DI + + Sbjct: 1 MKIAVIDDERPSRKELIHQILSAMPDSHI-EEADSGSNALELISSQPFDLLFVDINLNDM 59 Query: 61 SGLEMVGMLDPEHR-PYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 G + IVF TA+ +YA+KAFE +Y+LKP D R+ + L + + Sbjct: 60 EGTTLAAAARRILPDAQIVFATAYSQYAVKAFELGVNNYILKPFDPDRVRRVLEKCCHDL 119 Query: 120 SKQDVSLLPENQQALK------------FIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTS 167 ++ S P + + I +L + + ++ + + + Sbjct: 120 NQSKASPAPVTGPGPSASQPAAPVPPSARMAINVNRTIVMLDIPQIVYIETSGRSCIIHT 179 Query: 168 HEGKEGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN--GLT 222 ++ L E R R H+ YLVNL ++ E+ N + ++ Sbjct: 180 AT-RDYTENQLLGEYEKRLAPHGFFRIHKSYLVNLGYITEMFPWANNSLAVKMQGFEKEI 238 Query: 223 VPVSRRYLKSLKEAIGL 239 +PV R +KSL++ +G+ Sbjct: 239 LPVGREKVKSLRQLLGI 255 >UniRef50_A9WL18 Two-component response regulator n=4 Tax=Micrococcaceae RepID=A9WL18_RENSM Length = 266 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 61/240 (25%), Positives = 115/240 (47%), Gaps = 14/240 (5%) Query: 4 VLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGL 63 V++ DDE A L L + I + + E + + + D LFLDI MP +SGL Sbjct: 26 VIVADDEQPAVRELAYLLGQDDRIGAIYSSISGTEVLQLLDAHQIDALFLDIHMPGLSGL 85 Query: 64 EMVGMLDPEHR---PYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 ++ +++ R P IVF+TA ++ A++AFE A DYLLKP+ L +++ R+ ++ Sbjct: 86 DLAKVINKFSRAEQPAIVFVTADEDRAVEAFELAAVDYLLKPVRTEPLAESVRRITEQLQ 145 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + Q I L++ ++ +V ++ + + + + L Sbjct: 146 -----FPEQMAQTDDLITVDQGGITKLIRKSEIRYVQAQGDYARLHTADA-SFLIRVPLS 199 Query: 181 TLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 LE + LR HR YL+++ H+ ++++ + + ++PVSRR+L L+ + Sbjct: 200 ELEEQWQSAGFLRIHRSYLISMPHVSQLQMSRGSAS--VRIGDASLPVSRRHLPGLRGKM 257 >UniRef50_C6VTD2 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VTD2_DYAFD Length = 261 Score = 220 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 57/257 (22%), Positives = 118/257 (45%), Gaps = 28/257 (10%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++ +IVDDE AR + ++Q+ +EI G +A + + + +++PD++FLDI+MP ++ Sbjct: 7 LRCIIVDDEADARRLIEKYVQKVPFLEIAGFAESATDALYLIREMKPDIIFLDIEMPEMT 66 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL------ 115 G E++ +L P RP ++ +TA YA++ +E DYLLKP+ R K + ++ Sbjct: 67 GFELLKLL-PAARPAVIMITADPSYALEGYEHELTDYLLKPVSFERFLKAVNKVDNARVP 125 Query: 116 ------------RQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGV 163 ++KQ F+ + ++ + ++ F+ + Sbjct: 126 KYLQATNESVRELGSQAKQSTEQAEAAGFTSDFLLLKENKKLIKVSPGEIHFIEGMRDYL 185 Query: 164 YVTSHEGKEGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG 220 + + + +T+ +E LR +R Y+VN ++EI E+ +G Sbjct: 186 KLYWSD-RVAVIHMTMSKIEEALSPSQFLRVNRSYIVNKKVIREIE-----GNEITTNSG 239 Query: 221 LTVPVSRRYLKSLKEAI 237 +P+ Y ++ + Sbjct: 240 RKIPIGITYRANVLAVL 256 >UniRef50_C6XX74 LytTr DNA-binding region n=5 Tax=Bacteroidetes RepID=C6XX74_PEDHD Length = 231 Score = 220 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 63/241 (26%), Positives = 125/241 (51%), Gaps = 14/241 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + LIVDD +A L+ + + + +VGEC +AVE + D+LFLDI+MP +S Sbjct: 1 MNCLIVDDNIIALAVLKKLISMEPTLTVVGECFDAVEAYKQIQTKEVDILFLDIEMPDMS 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+E+V L + RP ++F T+ YA +AF+ + D+L+KP+ AR + + + ++ Sbjct: 61 GIELVKSLG-DKRPMVIFTTSTIGYAAEAFDLNVVDFLIKPVSPARFLQAVEKAKRVLLT 119 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 + +S+ + +F+ + + +++ D+ ++ +R V + + +L++ Sbjct: 120 KGLSVA---DKEDEFVFIRDSNVVRRVKVSDILYMEARGDYVRINLTD-HTYSIHSSLKS 175 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIG 238 +E + LR HR +++N+ + I G ++ RN VPVS Y +L + + Sbjct: 176 VEEKLSKNMFLRVHRSFIINVGKIDTIE----GGTLIVHRN--MVPVSDAYRATLYKRMQ 229 Query: 239 L 239 + Sbjct: 230 I 230 >UniRef50_Q1VYF8 Two-component system response regulator protein n=2 Tax=Flavobacteriaceae RepID=Q1VYF8_9FLAO Length = 241 Score = 220 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 65/249 (26%), Positives = 118/249 (47%), Gaps = 22/249 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K LIVDDEPLA ++ + S ++IV EC +A E I +++ + D++FLDI MP++ Sbjct: 1 MKCLIVDDEPLAHRIIKNYCNNLSFLDIVKECHSAFEAINYLNENQVDLIFLDINMPKLK 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL+ + L + P I+ +A+ EYA++ +E + DYLLKP R K + + ++ Sbjct: 61 GLDFLRTLS--NPPLIIITSAYQEYAMEGYELNILDYLLKPFSFERFLKAINKAVSQKKL 118 Query: 122 ----------QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGK 171 + + N + + I G + + +Q + ++ S S V + E + Sbjct: 119 LDTSEKTPNIKVTPVSLPNNENQESIFIKGDKKTHQVQFDSILYLESIGSYVKIHL-ENE 177 Query: 172 EGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRR 228 + L E++ P LR HR Y++ + + I + N +PV Sbjct: 178 TIISLDRLTNFENKLPKNIFLRIHRSYIIAIKKVNTIEGNR------VKINKKEIPVGSV 231 Query: 229 YLKSLKEAI 237 Y +L + + Sbjct: 232 YKHNLTKFM 240 >UniRef50_D2QDG4 Two component transcriptional regulator, LytTR family n=4 Tax=Bacteroidetes RepID=D2QDG4_9SPHI Length = 254 Score = 220 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 66/254 (25%), Positives = 114/254 (44%), Gaps = 24/254 (9%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRP-DVLFLDIQMPRI 60 + + VDDEPLA + F+++ +++ G S+AVE + + P +V+FLDIQMP + Sbjct: 3 LSCIAVDDEPLALGLVCAFIEKTPFLQLAGRYSSAVEALEGLLSGPPVNVVFLDIQMPDL 62 Query: 61 SGLEMVGML----DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR 116 +GLE+ +L H IVF TAFD++A+ F A DYLLKP + + ++ R Sbjct: 63 TGLELARVLERSNRGAHTTRIVFTTAFDQFALDGFRVDALDYLLKPFNYEEFLRAASKAR 122 Query: 117 QERS--------KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT-- 166 Q L N+ A + ++ + D+ ++ V V Sbjct: 123 QYFDLVQRTEPVPAAQVLAAPNEIADDHLFLKVEYQLVRIAYNDILYIEGLKDYVKVYRQ 182 Query: 167 SHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTV 223 S K + +L+ LE + P +R HR ++++L + + + + Sbjct: 183 SEPDKPLLSLTSLKGLEEKLPANQFMRVHRSFIISLQRISAFTRNS------VQIGSVVI 236 Query: 224 PVSRRYLKSLKEAI 237 PVS +Y + I Sbjct: 237 PVSDQYKDVFGQFI 250 >UniRef50_Q8A855 Two-component system response regulator n=1 Tax=Bacteroides thetaiotaomicron RepID=Q8A855_BACTN Length = 228 Score = 220 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 61/240 (25%), Positives = 118/240 (49%), Gaps = 16/240 (6%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI +IV+D PLA + L+ F+ + +++ G N ++ + D+LFLDIQM + Sbjct: 1 MINCIIVEDAPLAVDKLKNFISKVPLLDLAGTFDNGLDAFDFLQSNTIDLLFLDIQMEQF 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +GL+++ L RP+I+ ++A+ EYA++ FE DYLLKP R K + +++ E Sbjct: 61 TGLQLLQAL--HTRPHIIIVSAYGEYAVQGFEYDVTDYLLKPYSFERFLKAVNKVQTEM- 117 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 S P +I R+ + + D+ ++ + + ++V + + T L+ + Sbjct: 118 ---ASNPPAQPLPKDYIFLKTEYRMVRINLCDILYIEGKGAYLHVIT-DTTRIMTLLSFK 173 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 +ES P +R H+ YL+ + + I ++ + +P+ + YLK + Sbjct: 174 EIESLLPAKQFIRIHKSYLIAINKIDNIER------NVVKIANMRIPIGKSYLKDFYLRL 227 >UniRef50_A6G9H1 LytTr DNA-binding domain family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G9H1_9DELT Length = 267 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 85/269 (31%), Positives = 121/269 (44%), Gaps = 36/269 (13%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSD-----IEIVGECSNAVEGIGAVHKLRPDVLFLDIQ 56 ++VLIVDDE AR LR L+ ++ IE+VGE ++ VE + + KL PD++ LDIQ Sbjct: 4 LRVLIVDDEAPARRRLRRMLERLTNDGAEAIEVVGEAADGVEALTQLTKLEPDLVLLDIQ 63 Query: 57 MPRISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR 116 MP + GL + P +F+TAFDE+A+ AFE A DYLLKPI RL+ L R R Sbjct: 64 MPALDGLALAQH---ASLPPFIFVTAFDEHALAAFEVGAADYLLKPIRRERLQLALERAR 120 Query: 117 QERSKQD-----------------------VSLLPENQQALKFIPCTGHSRIYLLQMKDV 153 Q + I + L ++ ++ Sbjct: 121 TRIEAQRDASAKGEGASELDELQATLRRLVAAEPAPASPTPPRIAAREGGSVRLFELAEI 180 Query: 154 AFVSSRMSGVYVTSHEGKEGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDN 210 S H G E + L LE R +R HR LV+L ++ + + Sbjct: 181 GRFWSADKYTCFH-HGGAEHVLDEGLGELELRLGAHGFVRVHRSELVDLGWVRAVH-SEA 238 Query: 211 GQAELILRNGLTVPVSRRYLKSLKEAIGL 239 G L LR+G V VSRR + +K +GL Sbjct: 239 GATSLELRDGQRVAVSRRMVAEIKRRLGL 267 >UniRef50_D2QTU6 Two component transcriptional regulator, LytTR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QTU6_9SPHI Length = 228 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 53/240 (22%), Positives = 112/240 (46%), Gaps = 17/240 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + +IV+DE ++R+ L+ ++ + + ++G NA + + D+++LD++MP +S Sbjct: 3 LSCIIVEDEAMSRKALQRLCEQHNSLHLLGVFDNARSALDYLADQTVDLIWLDVEMPGLS 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G +++ L PY++ T EYA +AF+ + DYL KP+ R + ++ + ++ Sbjct: 63 GFDLLEQL--PSIPYVILTTGKIEYAFEAFQYNVTDYLKKPLTLPRFNLAVEKVLELNAR 120 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 + + K I R L +++ ++ + V + + + T++ Sbjct: 121 S------KTGDSRKEIYIKTDGRYIRLPFENITYIENIGDYVKIFTAT-QTHIVYTTMKY 173 Query: 182 LESRT--PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL 239 LE + LR HR Y+V+L + +I ++ N +P+SR L + L Sbjct: 174 LEEKLGKQFLRVHRSYIVHLDKIVDIE------DNTLVVNNKVIPISRANKPELMNRLNL 227 >UniRef50_A3UEG7 Two-component system regulatory protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UEG7_9RHOB Length = 258 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 72/260 (27%), Positives = 116/260 (44%), Gaps = 25/260 (9%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++V DDEPLARE +R L DIEI GE N + I + P+++FLDI+MP++ Sbjct: 1 MRVCFADDEPLARERMRKMLALDEDIEICGEAQNGEDMIALIQAEEPELVFLDIEMPKLD 60 Query: 62 GLEMVGMLDP----EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ 117 G ++V L + P +F TAF A +A++ A D+L KPI ARLE L+R RQ Sbjct: 61 GFDVVEALAQATFRDEPPLFIFATAFPAMAAQAYDTGAIDFLTKPIRPARLELALSRARQ 120 Query: 118 ERSKQDV---------------SLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSG 162 ++ + Q I + + ++ + +VS+ Sbjct: 121 LLRSREAMSRLEKLQSHLEGLRETRSRSSQGPVSIWVSNGGQNIRVEPSQIEYVSAEAEY 180 Query: 163 VYVTSHEGKEGFTELTLRTLESRT---PLLRCHRQYLV-NLAHLQEIRLEDNGQAELILR 218 + + E + ++ E +R HR Y+V +Q G + LR Sbjct: 181 IRLHIGE-RSLLHRQSISAFEEEMAEEGFIRVHRSYIVPARDCIQT-SRTSWGGLLVHLR 238 Query: 219 NGLTVPVSRRYLKSLKEAIG 238 NG +PV R++ L+ +G Sbjct: 239 NGQVIPVGRKFKDKLQALMG 258 >UniRef50_A4A4S8 Two-component system, regulatory protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4A4S8_9GAMM Length = 237 Score = 220 bits (561), Expect = 3e-56, Method: Composition-based stats. Identities = 65/238 (27%), Positives = 109/238 (45%), Gaps = 11/238 (4%) Query: 3 KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 + LIVDDE L RE + + + +++V C+NA+E + D+LFLDI+MP + G Sbjct: 7 RCLIVDDEHLGRELIEGHVAQLQQLQLVASCANALEAGETLASESVDLLFLDIEMPMLKG 66 Query: 63 LEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSKQ 122 + L H P ++F TA+ EYA++ FE A DYLLKP+ R K + R R + Sbjct: 67 TDFYQGLR--HPPAVIFTTAYREYALEGFELEAIDYLLKPVTFPRFFKAVNRFLNARRAR 124 Query: 123 DVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRTL 182 + A F+ + L + D+ +V + + + + K + T+++ Sbjct: 125 ATTDELPRGLARDFVFVRCDRKDVRLCIADIEYVQGLKDYIRIHT-QRKIYTVKETMQSF 183 Query: 183 ESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIG 238 R L+R HR YLVN + + D + + +P+ Y +G Sbjct: 184 SERAGSELVRVHRSYLVNRLRVTALASMD------VEVGDIEIPLGETYRAEALRKLG 235 >UniRef50_D2QHW7 Two component transcriptional regulator, LytTR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QHW7_9SPHI Length = 237 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 117/245 (47%), Gaps = 19/245 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I+ L+VDD+PLA + L ++ + + + +N ++ + V + D++ LDIQMP ++ Sbjct: 5 IRCLVVDDKPLALDILTNYIGKVPFLHLAAATTNPLDALTRVAQEPIDLILLDIQMPELT 64 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL+ + L+ R ++ TA+ EYA+ FE DYLLKPI R + + +++Q+ Sbjct: 65 GLQFLTALNSRSR--VILTTAYAEYALDGFEHDVVDYLLKPISFERFYRAVLKVQQQMRP 122 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 L + ++ R+ + + ++ + + V + ++ T + Sbjct: 123 SPDLPLEQRA----YLFIRTEHRMQRVDIANILYAEGLQNYTVVHTV-AEKVIARQTFGS 177 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT----VPVSRRYLKSLK 234 LES P +R H+ ++V LAH+ + + ++NG +P+ Y + Sbjct: 178 LESNLPPSAFVRVHKSFIVALAHISTVERS-----RIYIKNGNQEPVNIPIGDAYRERFY 232 Query: 235 EAIGL 239 + +G+ Sbjct: 233 KLLGM 237 >UniRef50_A6EI22 Response regulator n=1 Tax=Pedobacter sp. BAL39 RepID=A6EI22_9SPHI Length = 249 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 68/247 (27%), Positives = 122/247 (49%), Gaps = 13/247 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQ-SDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 IK +IVDDEP +R NLR L E D+E++ E +A + + +PD+LFLDI+M I Sbjct: 3 IKSIIVDDEPKSRSNLRQLLTEYCPDVEVIAEAGSATSALVMIAAHQPDLLFLDIEMGEI 62 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SG +++ +L + R ++F+TAFD+Y I+A + A DYLLKPI+ L + + ++ Sbjct: 63 SGFDLLKLLHGKQRFELIFVTAFDKYGIQAVKACAIDYLLKPINIIELSTAVDKAIKQIG 122 Query: 121 KQDVSLLPE-------NQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 + +L + + + I +I + + + + + + + + K Sbjct: 123 PKKENLRLKELVANIDRRIDEQKIAVPLADKIEFIAVSRIIRLEAEGNYTHFYLDDRKHL 182 Query: 174 FTELTLR---TLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYL 230 TL+ L R +R H+ +L+N + D G + + +G VP+SR+ Sbjct: 183 LICKTLKDYQELLERHHFIRTHQSHLINFHRISAYVKTDGG--YIAMEDGSQVPISRQKK 240 Query: 231 KSLKEAI 237 + + I Sbjct: 241 EEVLAKI 247 >UniRef50_D2QDN3 Two component transcriptional regulator, LytTR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QDN3_9SPHI Length = 256 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 70/257 (27%), Positives = 125/257 (48%), Gaps = 26/257 (10%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +V+I+DDEP AR+ + F+ + D++ V CSNA++G+ A+ L+PD+LFLDIQMP ++ Sbjct: 5 YRVIILDDEPPARDLIETFVSQLPDLQCVASCSNAIQGLQAIQDLKPDLLFLDIQMPEMT 64 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL+++ L RP I+ TA+ +YA+ ++E DYL+KPI R + + + R++R Sbjct: 65 GLDLMK-LPLTPRPEIILTTAYPQYALTSYEFSVLDYLVKPIAFDRFIRAIVKFREKRQP 123 Query: 122 QDVS----LLPENQ------------QALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYV 165 + E+ I R+ + +++ +V V V Sbjct: 124 ASPPVGWYPIEESPASGQPRTDGVPLPESNSIWLREEKRLLQIPYQEILYVEGLKDYVKV 183 Query: 166 TSHEGKEGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT 222 + + T + L E +R HR ++V L+ ++ I + L NG Sbjct: 184 HL-QHQVIVTHMNLGKAEKLFAPPQFVRVHRSFIVLLSAIRLID-----GNTITLTNGKQ 237 Query: 223 VPVSRRYLKSLKEAIGL 239 + + Y + LK+ I + Sbjct: 238 LAMGPLYREELKKHISV 254 >UniRef50_A1ZI08 Two-component system response regulator n=3 Tax=Bacteroidetes RepID=A1ZI08_9SPHI Length = 258 Score = 219 bits (560), Expect = 5e-56, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 120/255 (47%), Gaps = 28/255 (10%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + +IVDDEPLARE +++ +QE ++++G NA++ + K D++FLDIQMP ++ Sbjct: 1 MNCIIVDDEPLAREGMKLNIQELPSLQLIGSFENAMQANDFLSKNEVDLMFLDIQMPEVT 60 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL+ + L+ + P+++ TA+ ++A++ + DYL+KPI R K + ++ Sbjct: 61 GLDFLKTLNLKKPPFVILTTAYPQFALEGYALDVIDYLVKPISMDRFIKAVNKVDYYYKL 120 Query: 122 QDVSLLPENQQA------------------LKFIPCTGHSRIYLLQMKDVAFVSSRMSGV 163 ++ + A +I + + +++ +V V Sbjct: 121 REQASTDTTPAAANTDKTSDSPVGSDNADIEDYIFIRADRKYMKVFFREINYVEGLKDYV 180 Query: 164 YVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNG 220 V + + ++ T + ++T+E + P +R + Y++N+ H++ + + Sbjct: 181 IVYT-DTQKIVTAMNIKTIEGQLPSNLFIRVSKSYIINMQHIKAVDNNF------VTIKE 233 Query: 221 LTVPVSRRYLKSLKE 235 VP+ + + + Sbjct: 234 KEVPIGKAFKDNFLN 248 >UniRef50_A1ZFR4 Two-component system response regulator protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZFR4_9SPHI Length = 243 Score = 219 bits (559), Expect = 7e-56, Method: Composition-based stats. Identities = 64/248 (25%), Positives = 131/248 (52%), Gaps = 21/248 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K L+VDDEPLA + ++ ++ + +E+VG C NA+E + +++ D++FLDIQMP ++ Sbjct: 3 LKCLLVDDEPLAHKIIQNYIARLNTLEVVGSCYNAIEALNFLYEHEVDLMFLDIQMPELN 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL+M+ L H P ++ TA+ E+A++++E DYLLKPI R K + R+ + S+ Sbjct: 63 GLDMLKTL--PHSPKVILTTAYTEFALESYEFGVVDYLLKPIAFPRFLKAVNRVIDDSSE 120 Query: 122 QDVSLLP---------ENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 S P N+ ++ + + + + ++ F+ + + + + + K Sbjct: 121 LQRSEKPPVINQQYSNANESLNGYLFLKENQVTHKVFLNNILFIQAYGNYLKFFTED-KM 179 Query: 173 GFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRY 229 T++ + ++ P +R H+ Y+V+L+ + +I ++ + N T+PV +Y Sbjct: 180 IMVADTMKNIMAQLPESDFVRVHKSYIVSLSKIDQIE-----GNQIKIIN-HTLPVGNKY 233 Query: 230 LKSLKEAI 237 ++ Sbjct: 234 RLVFEQKF 241 >UniRef50_A8UNX0 Two-component system response regulator protein n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UNX0_9FLAO Length = 229 Score = 219 bits (558), Expect = 8e-56, Method: Composition-based stats. Identities = 60/241 (24%), Positives = 113/241 (46%), Gaps = 21/241 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVH-KLRPDVLFLDIQMPRI 60 + LI+DDE +++ L+ F++E +++ C+N E + D+LFLDI MP+ Sbjct: 7 MTCLIIDDELSSQKVLQHFIKETDVLDLKATCNNTTEAFKHLQLNGTVDLLFLDINMPQQ 66 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +GL+ L H P ++F TA+ +YA++ FE +A DYLLKP R + ++ Sbjct: 67 TGLDFYKSLK--HPPQVIFTTAYPQYAVEGFEVNAIDYLLKPFAYNRFLIAINKVLN--- 121 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + + FI + ++ + KD+ ++ + V + + E K T T Sbjct: 122 ------IKNTETKDNFIVLKENKALHKVFFKDIQYIEAFGDYVKIHTEE-KTVTTHSTFS 174 Query: 181 TLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIG 238 L P LR H+ + +NL + + I + +P+ + Y +++ +A+ Sbjct: 175 KLIESLPEYFLRTHKSFSINLNKMNHL------SGNQITVDNHVIPIGQTYKQTVLKALN 228 Query: 239 L 239 L Sbjct: 229 L 229 >UniRef50_C6XUE8 LytTr DNA-binding region n=2 Tax=Pedobacter RepID=C6XUE8_PEDHD Length = 259 Score = 217 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 70/254 (27%), Positives = 119/254 (46%), Gaps = 18/254 (7%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQS-DIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 M+ +IVDDE AR +L LQE ++ I G + E + + D++FLDI MP Sbjct: 1 MLNTIIVDDEEFARSSLYFLLQENCGEVHISGIAKSVAEARNLLTQHAVDLIFLDIAMPG 60 Query: 60 ISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +G E++ + +I+F TA+D+YA+KA + +A DYLLKPID L+ +A+ + Sbjct: 61 ENGFELIPY-AQSNNAHIIFTTAYDQYALKAIKANALDYLLKPIDIDELKIAVAKAVRFI 119 Query: 120 -----------SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSH 168 S Q +++ + ++ I L+ + D+ +++ + Sbjct: 120 ALNKKENNRNESLQSLAVNLAERNEIRKISLPNGQGYSLVNIDDIIHIAADSNYSVFYFA 179 Query: 169 EGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPV 225 + L+ E P +R H+ +VNL +L+E E+IL+NG + V Sbjct: 180 NKDKITVSKVLKEYEEILPDHQFVRIHKSSIVNLNYLKEY--NSKNGLEVILKNGEKIAV 237 Query: 226 SRRYLKSLKEAIGL 239 SRR E + L Sbjct: 238 SRRRASEFVEKVKL 251 >UniRef50_A5FIV7 Two component transcriptional regulator, LytTR family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FIV7_FLAJ1 Length = 237 Score = 217 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 58/232 (25%), Positives = 113/232 (48%), Gaps = 13/232 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + LIVDDE A + L + + +++E G + +E + ++ + D++FLDI MP IS Sbjct: 5 YRCLIVDDESPAHKALISHISKFNELEHSGSAFSGMEALKLLNANQYDIIFLDINMPVIS 64 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+E++ + +RP + TA+ ++A+ A++ A DYLLKPI + K + + + S Sbjct: 65 GVELMEL--QPNRPLTIVTTAYSDFALSAYQNDAIDYLLKPISPEKFAKAIEKAKTYFSG 122 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVT-SHEGKEGFTELTLR 180 SL E+ K + + + + D+ ++ S + + + + +L Sbjct: 123 N--SLKKESNTNSKTFSYRLNGQTIDMPLCDIIYIESLGNYMKLYSTKHNLPHIIYGSLS 180 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRY 229 ++ S ++ HR Y+VN + + + L + NG +PV R+Y Sbjct: 181 SIASEIDSTSFVQVHRSYIVNANKISAVTFK-----NLTMSNGEIIPVGRKY 227 >UniRef50_C6W213 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W213_DYAFD Length = 260 Score = 217 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 79/256 (30%), Positives = 133/256 (51%), Gaps = 22/256 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSD-IEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 +K +++DDEPLA LR L++ +D IV E N EG+ + + PDV+FLDI+MP + Sbjct: 5 LKTILIDDEPLALSRLRRLLEKHTDTFTIVSEAKNGAEGLVEIDRHHPDVIFLDIEMPLL 64 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G EM+ L P +VF TA+D+YAI+AFEE++ DYLLKP++ RL KT+ ++R Sbjct: 65 NGFEMLSKLTR--MPLVVFSTAYDQYAIRAFEENSVDYLLKPVENDRLMKTIEKIRNITQ 122 Query: 121 KQDVSLLPENQQALK---------------FIPCTGHSRIYLLQMKDVAFVSSRMSGVYV 165 + N + + RI L+ M ++ + V++ Sbjct: 123 AGNGHPGSFNPYSENLLRLLEEMKPKKEIFSLSVKTGDRILLIPMTEITHFEAEEKYVFL 182 Query: 166 TSHEGKEGFTELTLRTLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL-- 221 + +G++ TL +LE + P LR R +VN H++EI+ NG+ +++R+ Sbjct: 183 NTLDGQKYLLNYTLTSLEEKLPKHYLRVSRAGIVNSHHIKEIQKHFNGKYVIVMRDRKAS 242 Query: 222 TVPVSRRYLKSLKEAI 237 V Y +++ + Sbjct: 243 QVTSGSTYGDAIRHLL 258 >UniRef50_A8UPH3 Response regulator n=2 Tax=Bacteroidetes RepID=A8UPH3_9FLAO Length = 252 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 62/250 (24%), Positives = 122/250 (48%), Gaps = 15/250 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQS-DIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 ++ +IV+DE +RE+L+ L E +IE+VG +N + + + +PDV+FLDI++ Sbjct: 3 LRAVIVEDEKHSRESLKSLLHEFCINIEVVGLAANVNDAVETIKSKKPDVIFLDIELQTG 62 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR---- 116 +G +++ + +VF TAF++YAIKA + + DYLLKPID L+ + + + Sbjct: 63 TGFDILQQVS-HLNFEVVFTTAFEQYAIKAVKFSSLDYLLKPIDIEELQNAVNKAQTIKN 121 Query: 117 ----QERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKE 172 +++ + + L + + L I +++KD+ + + S ++ Sbjct: 122 QDVYKKQLETLMLNLKQQKPQLNKICLATSDGFEFVEVKDILYCKAEGSYTTFILKNSEK 181 Query: 173 GFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRY 229 L+ E+ +R H +L+NL +++ D G +I+ N TV +SR Sbjct: 182 LLVSKHLKEYENLLLEQNFMRVHNSFLINLKEVKKYIKSDGG--YIIMSNDDTVSISRSK 239 Query: 230 LKSLKEAIGL 239 + + + Sbjct: 240 KDDFIKVMSM 249 >UniRef50_A6G241 Response regulator receiver protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G241_9DELT Length = 239 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 86/240 (35%), Positives = 127/240 (52%), Gaps = 12/240 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 ++VLIVDDE AR LR + + +E+ GE ++A + + R DV+ LDI MP +S Sbjct: 5 LRVLIVDDETPARRRLRRACERVAGVEVAGEATDAATLRRVLTRDRADVILLDIAMPGLS 64 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+E+ P I+F TA E+A++AF A DYLLKPI E L LAR+R Sbjct: 65 GIELA---REPGLPPIIFTTAHSEHALEAFRVDAVDYLLKPISEHALALALARVRARVPT 121 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 Q S+ + S + + ++V+ ++S V V +G+E + +L T Sbjct: 122 QTPSVSHTPP----RLATRTGSLLRVFDAREVSHLASTDR-VVVFWIDGQEMILDESLNT 176 Query: 182 LESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIG 238 LE+R LR HR LVNL + +R +++G A L LR+G VPVSRR L +K + Sbjct: 177 LEARLRGHDFLRVHRSALVNLTFVSAMRFDEDGAA-LQLRDGTVVPVSRRLLPEVKRRLS 235 >UniRef50_A5FL89 Transcriptional regulator, LytR/AlgR family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FL89_FLAJ1 Length = 229 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 70/234 (29%), Positives = 113/234 (48%), Gaps = 20/234 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I +IVDDEPLA + L + + ++ +VG NA+E D++FLDIQMP ++ Sbjct: 3 IDCIIVDDEPLAIKLLENHISKIEELRLVGTAGNALEAYKLTKLKTVDLIFLDIQMPDLT 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G++ + L ++P +F TA+ E+A++ FE A DY+LKPI R K + R+ + Sbjct: 63 GIDFLKSLK--NKPKTIFTTAYREFAVEGFELEAVDYILKPITFDRFFKAVERVLRH--- 117 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 + F+ + Y + +K + F S+ + V V K + L Sbjct: 118 ------DSDYVKEDFLMLKSNGLQYKINLKSILFFESQGNNVKVVLKNEKPLIVKYKLSD 171 Query: 182 LE---SRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKS 232 LE S +R HR ++VN + + G ELI+ N +VPV R Y + Sbjct: 172 LENDLSSLGFVRIHRSFIVNSKEINAL-----GNTELIIEN-FSVPVGRSYKSN 219 >UniRef50_A0LTS8 Response regulator receiver protein n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LTS8_ACIC1 Length = 249 Score = 216 bits (552), Expect = 4e-55, Method: Composition-based stats. Identities = 76/240 (31%), Positives = 120/240 (50%), Gaps = 10/240 (4%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + VL VDDEP A + L L++ + + +A E + + DV+FLD+ MP + Sbjct: 5 LSVLAVDDEPPALDELVYSLRQCPAVGTIYAAHDAAEALRCLEHDDVDVVFLDVVMPGLD 64 Query: 62 GLEMVGMLDPEHR-PYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GLE+ G+L+ R P +VF+TA ++YA+ AF A DY+LKP D RL LAR+ S Sbjct: 65 GLELAGVLNRFARAPAVVFVTAHEKYAVAAFGVQAVDYVLKPFDVHRLSAALARVTGRTS 124 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + ++ + + R L+ +V +V + V V +H+G + L Sbjct: 125 TAN----RDSGEQFATLAADLPGRTVLIDRSEVEWVEAAGDYVRVHTHDGHSYLVRVPLA 180 Query: 181 TLESR---TPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 L R R HR +LV L ++EI D + +L G +PVSRR+L+ +E + Sbjct: 181 VLAERWEPHGFARIHRSHLVALRAVREIATRDGQTS--VLVGGHHLPVSRRHLRDFRERL 238 >UniRef50_B3JKI8 Putative uncharacterized protein n=3 Tax=Bacteroides RepID=B3JKI8_9BACE Length = 235 Score = 216 bits (552), Expect = 4e-55, Method: Composition-based stats. Identities = 71/238 (29%), Positives = 127/238 (53%), Gaps = 13/238 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IK + +DDEP+A E + F Q +IE+ +N + GI V K++P++LFLDI+M I+ Sbjct: 3 IKCIAIDDEPMALEIISSFCQRHGNIELT-VFTNPIAGIEQVKKIKPNILFLDIEMEDIN 61 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G ++ L H ++F TA+ +YA+ FE +A D+L KP AR EK + + + ++ Sbjct: 62 GRDLARDL--PHEVMLIFTTAYAQYALDGFELNAIDFLHKPFSYARFEKAVQKAIELQTL 119 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 Q +S P ++I + +Q+KD+ ++ S + V + ++++L+T Sbjct: 120 QQLSAQPTF--TDEYITLKVEYKNTNIQLKDILYIESMDNYVRIHLTSQPTLTSQMSLKT 177 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEA 236 L+ P +R H+ ++V + + E++L NG+ +PV R Y K LK+ Sbjct: 178 LQELLPEEKFIRVHKSFVVPIYRIASYT-----SKEILLYNGIKIPVGRSYSKYLKDK 230 >UniRef50_A6FYA0 LytTr DNA-binding domain family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FYA0_9DELT Length = 238 Score = 216 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 70/238 (29%), Positives = 107/238 (44%), Gaps = 15/238 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + LIVDDEP AR LR L + + +VGE +A + + RPDV+ LDI+M Sbjct: 5 LTALIVDDEPPARRRLRALLGQL-GVAVVGEAGSARAAEALLARHRPDVVLLDIEMRGEH 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+++ R +VF+TA ++A+ AF A DY+LKP+ RL + L R Sbjct: 64 GIDIARSWAG--RVGVVFVTAHAQHAVAAFGVDAIDYVLKPVSAPRLLEALERAAARL-- 119 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGK-EGFTELTLR 180 P QA + I L V + S V + + TL Sbjct: 120 ------PRRGQAPPRLVVRSTEGIAWLDTDSVLRIESAGDYVEFHLAGPQPSLLSPTTLG 173 Query: 181 TLESRT--PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEA 236 E+ P +R HR+++V +Q + G+ L L G ++PV RRY +++K Sbjct: 174 HWEATLPEPFVRVHRRHIVRWTAIQALVTGREGR-RLELAGGGSIPVGRRYFEAVKAR 230 >UniRef50_C0YLA6 Two-component response regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YLA6_9FLAO Length = 225 Score = 216 bits (551), Expect = 5e-55, Method: Composition-based stats. Identities = 59/239 (24%), Positives = 118/239 (49%), Gaps = 19/239 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IK +IVDDEPLA L + ++ +E+V N + + + K D++FLDIQMP ++ Sbjct: 4 IKCIIVDDEPLAISLLEHYAEKIPFLELVFSTENPILAVEYLQKNDSDLIFLDIQMPELT 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+ + ++ + + + TA+ EYA++ +E + DYLLKP+ R +K++ + ++ S Sbjct: 64 GINFMKIVGADQKY--IVTTAYSEYALEGYEHNVVDYLLKPVSFERFQKSVLKAQERFSF 121 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 Q+ + + + + ++ ++ S V + + E TL++ Sbjct: 122 P--------QEENTYFFVKSSGQRHRISFNEILYIESIKDYVNIRTEND-EYIVLDTLKS 172 Query: 182 LESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIG 238 +ES+ +R H+ +++NL ++ I G ++IL +P+ Y L + I Sbjct: 173 MESQLSEKFVRVHKSFIINLDKIKSI-----GAKKIIL-PEYEIPIGESYRAGLLDRIS 225 >UniRef50_A5FHY1 Two component transcriptional regulator, LytTR family n=2 Tax=Flavobacteriales RepID=A5FHY1_FLAJ1 Length = 235 Score = 216 bits (551), Expect = 6e-55, Method: Composition-based stats. Identities = 57/240 (23%), Positives = 122/240 (50%), Gaps = 18/240 (7%) Query: 3 KVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISG 62 K +IVDDEP A L ++ + S +E +++++ + ++ DV+FLDIQMP+++G Sbjct: 4 KCIIVDDEPPATRILENYIGKVSFLEKTEVFNDSLKALEFLNTQSVDVIFLDIQMPQLTG 63 Query: 63 LEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSKQ 122 L++ ++ + ++F TA+ ++A++ FE +A DYLLKPI R + +++L + Q Sbjct: 64 LQISRIISKD--IKVIFTTAYPDFALEGFELNAVDYLLKPISFERFYQAVSKL----NTQ 117 Query: 123 DVSLLPENQQALKFIPCTGHS--RIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 +++ F+ + + + D+ +V S + V + + + ++ T +L+ Sbjct: 118 SKTVVSNQNNLPDFLFIKTDGKNKFQKVFLNDILYVESLQNYVCIHTSK-QQIITHSSLK 176 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 + P ++ + Y+V+L HL+ + NG +P+ Y ++ + I Sbjct: 177 NVIESLPENNFIQIQKSYVVSLKHLESTDNYS------VYINGKELPIGAAYKEAFFDKI 230 >UniRef50_A3HT26 Two-component system response regulator n=1 Tax=Algoriphagus sp. PR1 RepID=A3HT26_9SPHI Length = 225 Score = 216 bits (551), Expect = 6e-55, Method: Composition-based stats. Identities = 65/239 (27%), Positives = 111/239 (46%), Gaps = 18/239 (7%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MIK + +DDE +A E ++ + + + +A++ + V + D++FLDI MP I Sbjct: 1 MIKAIAIDDEKMALEVIKAHASKVPFLHLDEVFLDAIQALEYVKEQSVDLIFLDINMPDI 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SG++ G+L E +VF TA+ ++A+K FE A DYLLKP + +R K + ++ Sbjct: 61 SGIDFAGLLPKE--TMVVFTTAYSDFAVKGFELDALDYLLKPFNLSRFIKACQKAQEWME 118 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 Q L ++ F + + V S E ++ + +TL Sbjct: 119 LQPEREPEST-------FIKTGEGQVRLHFGELLFCEASGNYVTFQSEE-EKVLSRMTLA 170 Query: 181 TLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 +E+ P +R HR +LVN + ++ L L+ TVPVS Y+ + E Sbjct: 171 EVENLLPSYFIRTHRSFLVNSKKVDKVEK-----HLLHLQ-QKTVPVSLSYMDQVMEFF 223 >UniRef50_A6LDC2 Two-component system response regulator protein n=5 Tax=Bacteroidales RepID=A6LDC2_PARD8 Length = 234 Score = 215 bits (550), Expect = 7e-55, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 127/239 (53%), Gaps = 18/239 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 IK +I DDEP+AR+ LR + + + IVGEC +A++ ++ ++ D+LFLDI+MP +S Sbjct: 3 IKCIITDDEPIARKGLRRHIGKIDFLTIVGECEDAIQLNNMLNSVQADLLFLDIEMPDMS 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 GL+ + ++ P ++ +A++ YA++ +E DYLLKPI +R K++ + Sbjct: 63 GLDFLE--SAQNAPKVIITSAYERYALRGYEFDVVDYLLKPISFSRFLKSVNKAHALMES 120 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 S P +I ++ L +K++ F+ + + + + KE L L++ Sbjct: 121 TSKSEEPA------YIFVKTEKQLKRLYLKEIQFIEGMENYIVIHTLTSKE-IVHLRLKS 173 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 ++ P ++ HR ++VNL+++Q I L++ +PVSR + + ++I Sbjct: 174 IQETLPAQIFMQVHRSFIVNLSYVQAIE------GNLLIIGEHKIPVSRPLREEVYKSI 226 >UniRef50_Q39P82 Transcriptional regulator, LytR/AlgR family n=21 Tax=Burkholderia RepID=Q39P82_BURS3 Length = 243 Score = 215 bits (550), Expect = 8e-55, Method: Composition-based stats. Identities = 68/247 (27%), Positives = 117/247 (47%), Gaps = 15/247 (6%) Query: 1 MIKVLIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 M LI DDEP L L ++EIVG N V+ + ++ RPD FLDI+MP Sbjct: 1 MPTALIADDEPNLSAELAARLATLWPELEIVGMPRNGVDALAELNAKRPDFAFLDIRMPG 60 Query: 60 ISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQ-- 117 I GL++ ++ ++VF+T++DEYA++AF++ A DYLLKP+ + RL + + +L++ Sbjct: 61 IDGLKIASLV---PHVHVVFVTSYDEYAVQAFDQSAIDYLLKPVADDRLLRCIVKLQRGG 117 Query: 118 ----ERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 + + P + +++I L+ + +V + + V + + Sbjct: 118 PAPTDTELLANAAEPRDAAPIRWITVGLRDTTRLVSVDEVLYFQAADKYTEVVTA-SERH 176 Query: 174 FTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRY 229 LR + R + HR +V A + I + G+ + LR G +PVSR Sbjct: 177 VIRTPLREMLQRLDTERFAQVHRGVIVAYAAIDHIERDLLGRQRIHLRGSGDVLPVSRAC 236 Query: 230 LKSLKEA 236 K+ Sbjct: 237 AGLFKQM 243 >UniRef50_C6Y0P9 Response regulator receiver n=2 Tax=Pedobacter RepID=C6Y0P9_PEDHD Length = 227 Score = 215 bits (550), Expect = 8e-55, Method: Composition-based stats. Identities = 55/239 (23%), Positives = 115/239 (48%), Gaps = 16/239 (6%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI + I DDEP+A + ++ + IE+ +NA + I + + + D++FLDI+MP I Sbjct: 1 MIAIAI-DDEPIALDVVKSHASKVPFIELKACFTNAFDAISFLQQNKTDLIFLDIKMPDI 59 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G++ + L + P ++F TA+ E+A+K+FE A DYLLKP +R K + ++ + Sbjct: 60 NGIDFLNSLS--NPPMVIFTTAYSEHAVKSFELDAIDYLLKPFSLSRFLKACNKAQELYT 117 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 ++ + + + +I + + D+ ++ + + + +E K T + L Sbjct: 118 LRNNTEITDPA----YIFIKDGYEQIKVLINDIEYIEASGNYTQIHLNEQKLLSTRVPLN 173 Query: 181 TLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEA 236 + P +R HR ++++ + + + T+P+ Y + L + Sbjct: 174 EMLLLLPAKKFIRTHRAFIISRDKISKFDRAQ------VWIGSQTIPIGSTYAQCLLDF 226 >UniRef50_C7PT73 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PT73_CHIPD Length = 243 Score = 215 bits (549), Expect = 8e-55, Method: Composition-based stats. Identities = 59/244 (24%), Positives = 116/244 (47%), Gaps = 14/244 (5%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 MI L+VDDE A + L + + +++V +NA+E + V+ + D++FLDIQMP + Sbjct: 1 MINCLVVDDEQHAIDVLTHHISQIPFLQLVKSTTNAIEALQIVNMQKIDLVFLDIQMPEM 60 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 SGL+ + + + ++ TA+ E+A + F+ DYLLKPI R K + R+ + Sbjct: 61 SGLDFAKTIQGKSK--VILTTAYSEFAAEGFDLEVVDYLLKPIPMPRFLKAVQRVLNMVT 118 Query: 121 KQDVSLLPENQQ--ALKFIPCTG--HSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTE 176 + E+ +I ++ + ++D+ ++ + V + H G++ Sbjct: 119 SSVAATPVEDASSIENDYIFLKTEFKGKMLKVNLRDIDYIEGMKNYVAIH-HAGQKTMAL 177 Query: 177 LTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSL 233 L ++ LESR P R H+ ++V+L+ + I G ++ + + Y Sbjct: 178 LNMKDLESRLPKKHFYRVHKSFIVSLSKIIAIE----GSMIVLKDVKAEILLGDTYKAGF 233 Query: 234 KEAI 237 + + Sbjct: 234 YDIM 237 >UniRef50_Q2RI16 Transcriptional regulator, LytR/AlgR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RI16_MOOTA Length = 245 Score = 215 bits (549), Expect = 9e-55, Method: Composition-based stats. Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 7/245 (2%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 M+ +I DD + R L+E ++++I+ E + + + V +LRPD+ FLDI+MP Sbjct: 1 MLTGIIADDNEIERLYFCKLLEETNEVKILAEAQDGLTVLDLVTRLRPDIAFLDIEMPGP 60 Query: 61 SGLEMVGML-DPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +GLE+ + IVF TA+ ++A++AF ++ DYLLKP D R+ KT+A+++++ Sbjct: 61 NGLEVAREILTLAPETLIVFFTAYRDFAVEAFALNSVDYLLKPFDAFRVRKTVAKVQEKL 120 Query: 120 SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 + ++V P + L + RI+L+ + ++ F+ + + K+ T T+ Sbjct: 121 AAREVIKKPGGGR-LDKLAIRNKGRIFLINLDEIIFIEKSGKNTTIIHTDRKDFHTPQTI 179 Query: 180 RTLESRTP----LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT-VPVSRRYLKSLK 234 LE + R H+ YL+NL ++ I + +SR + +K Sbjct: 180 AELEQQLARHSFFQRVHKSYLINLNMVESISPFGGNSFIVKFSGCKKDAIISRGNIDLVK 239 Query: 235 EAIGL 239 + + + Sbjct: 240 KHLKI 244 >UniRef50_C6XYH6 LytTr DNA-binding region n=5 Tax=Sphingobacteriales RepID=C6XYH6_PEDHD Length = 250 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 109/251 (43%), Gaps = 24/251 (9%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K + VDDEPLA + + ++ + +E++ NA+E + V D++FLDIQMP ++ Sbjct: 4 LKCIAVDDEPLALDIIEDYVSKVPFLELIKRTENAIEALQMVQAGGVDLVFLDIQMPELT 63 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G++ + + + + +F TA+ +YA+++++ + DYLLKPI R K + ++ + Sbjct: 64 GIQFLKIANGKSNY--IFTTAYSQYALESYDLNVSDYLLKPIAFDRFYKAVEKVHNQLKV 121 Query: 122 QDVSLLPENQ------------QALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHE 169 + FI +I +++ ++ ++ + + + Sbjct: 122 GQPAENAIQPLLTPATAVAPANPIQDFIFVKTEHKIQKIELDNILYIEGLKDYISIFTKT 181 Query: 170 GKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVS 226 + T ++ ++ P +R H+ Y++ L ++ I +P+ Sbjct: 182 -ERVITLQNMKKMDETLPKGQFIRVHKSYIIALDKIESIERSRIS------IGEKVIPIG 234 Query: 227 RRYLKSLKEAI 237 Y I Sbjct: 235 DTYRDEFFRHI 245 >UniRef50_C6BHH2 Two component transcriptional regulator, LytTR family n=5 Tax=Burkholderiaceae RepID=C6BHH2_RALP1 Length = 277 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 70/273 (25%), Positives = 120/273 (43%), Gaps = 40/273 (14%) Query: 3 KVLIVDDEPLARENLRVFLQE-QSDIEIVGECSNAVEGIGAVHK----LRPDVLFLDIQM 57 +VLI DDEP ENL L + ++ + + + PDV+FLDI+M Sbjct: 6 RVLIADDEPALAENLVAELAALWPEATLLPAVHDGQSALDVIDDAADGQGPDVVFLDIRM 65 Query: 58 PRISGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLR 116 P +SG+++ L + RP +VF+TA+D++A+ AFE+ A DY+LKP+ RL +T+ RL+ Sbjct: 66 PGLSGIDVARELSQRDVRPLVVFVTAYDQFALDAFEQAAVDYVLKPVQTERLAETVKRLK 125 Query: 117 QERSKQ-----------------------------DVSLLPENQQALKFIPCTGHSRIYL 147 + + L+FI + Sbjct: 126 DRLGTRPNGNADALATNPAQTLAELVERLAGLQGAAQTRATPQGGYLRFIKALVGQEVRF 185 Query: 148 LQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQE 204 + + DV ++ + V V S G+ +LR L ++ + HR +VN+AH+ Sbjct: 186 IPVDDVIYLEATDKYVNVVSASGES-LIRTSLRDLLTQLDPEHFWQVHRGTVVNVAHVSS 244 Query: 205 IRLEDNGQAELILRNGLT-VPVSRRYLKSLKEA 236 G+ L +R +PV+R+Y ++ Sbjct: 245 AVHLSLGRLGLKIRGRTETLPVARQYAHLFRQM 277 >UniRef50_A1ZKV0 Two-component system response regulator protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZKV0_9SPHI Length = 235 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 65/243 (26%), Positives = 128/243 (52%), Gaps = 16/243 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLR-PDVLFLDIQMPRI 60 + +IVDDE ++R+ + F+++ + + C NA++ I + K + D+LFLD++MP + Sbjct: 3 MNCMIVDDEDISRKVVEHFVEKTDSLTLKHLCDNAIDAINILKKDKSVDILFLDVEMPEM 62 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +GLE+V L IV +T+ EYA++AFE + DY++KPI+ R K +AR+ ++ Sbjct: 63 TGLELVAAL-KSTSICIVLITSKMEYAVEAFEYNVTDYIIKPINYPRFLKAVARVEEQLQ 121 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 Q S N L + +I +++++V+++ + V + + K+ T++ Sbjct: 122 GQSQSG---NDTELSALFVKTDYKIVKIELEEVSYIEALSDYVIIYCGD-KKYVVHSTMK 177 Query: 181 TLESRT----PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEA 236 +E + LR HR Y+VN H++ I+ + G ++P+ R Y + + Sbjct: 178 GIEKKLAPAKNFLRVHRSYIVNKQHIESIQ------DLYVEIGGKSIPIGRSYKNNFIKN 231 Query: 237 IGL 239 + + Sbjct: 232 LNI 234 >UniRef50_A6LH97 Two-component system response regulator n=26 Tax=Bacteroidetes RepID=A6LH97_PARD8 Length = 251 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 57/249 (22%), Positives = 119/249 (47%), Gaps = 21/249 (8%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + I+DDEPLA L ++ + +++ G ++A++ + + D+LFLDIQMP +S Sbjct: 3 LTCAIIDDEPLAVSLLESYVLKTPFLDLQGTYNSALDALSDLRDRPVDLLFLDIQMPELS 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER-- 119 GLE +L+ + R ++F TAFD+YA+ ++ +A DYLLKPI + + + Sbjct: 63 GLEFSRILNADTR--VIFTTAFDQYAVDSYRVNALDYLLKPISYPDFLASANKALRWYEL 120 Query: 120 -------SKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEG-K 171 +++ S + ++ I ++ ++++ + ++ V + + + Sbjct: 121 LRKPVSSEEKEGSAPIAEKGGMESIFVKSEYKLLQIELRKILYIEGLKDYVKIFVEDEPR 180 Query: 172 EGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRR 228 + +++++LE P +R HR ++V ++ I I+ +P+S Sbjct: 181 PVLSLMSMKSLEDMLPSDRFVRVHRSFIVQPEKIKVIERNR------IVFGKEYIPISDN 234 Query: 229 YLKSLKEAI 237 Y + E I Sbjct: 235 YKQHFLEMI 243 >UniRef50_A8UFS0 Two-component system response regulator n=2 Tax=Bacteria RepID=A8UFS0_9FLAO Length = 240 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 55/240 (22%), Positives = 103/240 (42%), Gaps = 13/240 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 LI+DDEPLARE + ++ + + E++ S+A+E + + D++FLDI+MP + Sbjct: 3 YNCLIIDDEPLARELIETYIAKLPEFELIASYSSAIEASTKLSTKQIDLIFLDIEMPVLK 62 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G + L +P ++F TA +YA+ FE +A DYLLKPI R + ++ Sbjct: 63 GTDFFKNLTQ--KPEVIFTTAHRDYALDGFELNALDYLLKPIFFERFFSATQKFLNIKTN 120 Query: 122 QDVSLLPEN--QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTL 179 + ++I + + ++ +V S + + + ++ Sbjct: 121 ESKKHFNTTSVSNKNEYIFVNKAKKQIKVIYNEILYVESFRDYIKIHLQTD-TLMIKESI 179 Query: 180 RTLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237 R +R HR Y+VN + D I + +P+ Y ++K + Sbjct: 180 SAFVERLDNRFIRVHRSYIVNSDMITAYTKND------IEIGRIEIPIGNNYKDNMKPFL 233 >UniRef50_B2V8S8 Two component transcriptional regulator, LytTR family n=3 Tax=Sulfurihydrogenibium RepID=B2V8S8_SULSY Length = 245 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 71/246 (28%), Positives = 127/246 (51%), Gaps = 9/246 (3%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + V IV+DEP+ARE L L+E ++ IVG + + + + DVLFLDI++P + Sbjct: 1 MNVFIVEDEPIARERLIRLLKEIGNVNIVGVADSKEKALSEMKDKEIDVLFLDIKLPDGT 60 Query: 62 GLEMVGMLDP--EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 GLE+ + ++ PYI+F TA ++A+ AF+ +A DYLLKP + +EK L +++ Sbjct: 61 GLEIAKEVIEGMDNPPYIIFATANGDFALDAFKANAIDYLLKPFTKEDVEKALEKIKNIE 120 Query: 120 SKQ--DVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTEL 177 +K + IP S+I LL+ D+ ++ + +S + + + KE + Sbjct: 121 NKSFNLAKIATITTNTEILIPVKHLSKIVLLKPDDIYYIKAELSETVIRTKD-KEYISNR 179 Query: 178 TLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKSL 233 L E R H+ YLVNL ++E++ + + + ++ T+ SR K L Sbjct: 180 KLYEFEDILKYIGFFRVHKSYLVNLTKIKEMKSVEQSKFLITFQDIPDTLKTSRDGAKYL 239 Query: 234 KEAIGL 239 ++ + + Sbjct: 240 RDYLNI 245 >UniRef50_A7AJK4 Putative uncharacterized protein n=2 Tax=Parabacteroides RepID=A7AJK4_9PORP Length = 251 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 67/247 (27%), Positives = 114/247 (46%), Gaps = 14/247 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQ-SDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60 I IVDDE RENL + I I CS+ E + + +PD+LFLDI++ Sbjct: 5 ITAAIVDDEQGNRENLLRMIGNYCPQIRISAICSSVTEARTVLPEAKPDILFLDIRLGDD 64 Query: 61 SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 +G ++G L PE ++F+TA+D YAI+A A DYLLKPID L + + Q Sbjct: 65 TGFSLLGSL-PEIPFEVIFVTAYDSYAIQAIRFSALDYLLKPIDPEELTHAVDKAVQVVL 123 Query: 121 KQDVSLLPEN-------QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEG 173 ++ + +N K I + +I +++ + S + G++ Sbjct: 124 RKQENKRMQNLLQNTQALDKQKKIALSVADKIEFVEIGSIIRCESESNYTTFYLKSGEKL 183 Query: 174 FTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYL 230 TL+ + LR H+ +L+NL ++ D G + +++G +V +SR+ Sbjct: 184 IVSKTLKEFDELLAPYHFLRVHQSHLINLDEIKSFIKSDGG--YIRMKDGASVSISRQRR 241 Query: 231 KSLKEAI 237 + E + Sbjct: 242 NYVMEVL 248 >UniRef50_C6WYV3 Two component transcriptional regulator, LytTR family n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYV3_METML Length = 255 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 71/250 (28%), Positives = 117/250 (46%), Gaps = 16/250 (6%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHK-----LRPDVLFLDIQ 56 + ++I DDE AR LR L + +I+ E N E + V++ +++ LDI+ Sbjct: 7 LNIVIADDEAPARSRLRTLLGDIPHTQIMAEARNGKELLEVVNQASDTHTAANIVLLDIR 66 Query: 57 MPRISGLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARL 115 MP + G+E L P I+F TA+D YAI+AF+ A DYLLKPI RL+ L + Sbjct: 67 MPEMDGIEAAQHLQKLPQPPAIIFTTAYDNYAIQAFDISAVDYLLKPIRLERLQTALQKA 126 Query: 116 RQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFT 175 R + Q +L P + Q + RI L+ + ++ ++ + + + V + E +E Sbjct: 127 RALQPSQLETLTPLSPQ-RTHLSINERGRILLVPINEIIYLRAELKYITVRTAE-REYLI 184 Query: 176 ELTLRTLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQA------ELILRNGLTVPVSR 227 E +L LE R HR L A++ + + L+ T+ VSR Sbjct: 185 EESLSHLEQEFSHIFTRLHRNCLAANAYILGYEKRHHDEHAEKQWVALLKHVPETISVSR 244 Query: 228 RYLKSLKEAI 237 R +++ I Sbjct: 245 RQQHLIRQTI 254 >UniRef50_C5PVL6 LytTR family two component transcriptional regulator n=3 Tax=Sphingobacterium spiritivorum RepID=C5PVL6_9SPHI Length = 232 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 57/240 (23%), Positives = 121/240 (50%), Gaps = 17/240 (7%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 I LI+DDEP A L + + S + ++ S+A E I ++ D++F+DIQMP+++ Sbjct: 5 INCLILDDEPFAVNLLADYASKVSQLNVIYAGSDAFEVIEILNSESVDLIFIDIQMPQLT 64 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G+E++ M + +H + +A+ EYA+ AF+ + D+LLKPI R +++ + + + Sbjct: 65 GIELMQMFNQKHN--FIITSAYSEYALDAFQFNVIDFLLKPITFNRFYQSVEKFNRWQD- 121 Query: 122 QDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRT 181 ++ ++ + + Y +Q +D+ ++ + + + + ++ Sbjct: 122 -----TFQSSESDNSLFVKADRKHYKIQPEDILYIEGLKDYIRIHTVSERMVVL-ENMKD 175 Query: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIG 238 + R P +R HR Y+V L ++ I +++++ NG +P+ Y K + E +G Sbjct: 176 ILDRLPQHQFVRIHRSYIVPLKRIKVIE-----GSQIVMTNGEYLPIGETYRKLIGEWLG 230 >UniRef50_A7HMG0 Two component transcriptional regulator, LytTR family n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HMG0_FERNB Length = 254 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 74/256 (28%), Positives = 129/256 (50%), Gaps = 24/256 (9%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 +K +IV+DE L L L+E IE++G N EGI V +L+PDVLFLDI + Sbjct: 1 MKCVIVEDEKLLAMVLEKMLKE-EGIEVLGWADNVDEGIRLVDELKPDVLFLDINLGDKD 59 Query: 62 GLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSK 121 G ++ ++ H+PY+VF+TA+ EYA+KAFE +A DY+LKP+ RL+ + ++ + Sbjct: 60 GFYLLSKIN--HKPYVVFVTAYSEYAVKAFERNAIDYILKPVSRERLKNAIDKVSKAIES 117 Query: 122 QDVSLLPEN-----------------QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVY 164 + ++ ++ K IP + I L+ D+ + Sbjct: 118 KKLNENYQDFIEEKIRSMLERLSYDLSNLQKKIPIETENEIVLVNCDDIILFQASEGLTV 177 Query: 165 VTSHEGKEGFTELTLRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGL 221 V +G T+ L+ E++ +R H+ Y++++ +++I G + L NG Sbjct: 178 VNLKQG-ILKTKTPLKEFEAKLSKDKFIRVHKSYIISINAVKKILKNYIGGLAIELINGN 236 Query: 222 TVPVSRRYLKSLKEAI 237 +PV R Y +++K+ I Sbjct: 237 IIPVGRMYKENIKKII 252 >UniRef50_C6VRP4 Two component transcriptional regulator, LytTR family n=3 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VRP4_DYAFD Length = 254 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 56/249 (22%), Positives = 112/249 (44%), Gaps = 16/249 (6%) Query: 1 MIKVLIVDDEPLARENLRVFLQEQ-SDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPR 59 MIKVLIVDDEP +R L +++ ++ V + + + + RP+++FLD++MP Sbjct: 1 MIKVLIVDDEPRSRNVLAHYIETYVEEVREVKQAESVDNALQILKTFRPNIVFLDVEMPG 60 Query: 60 ISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQER 119 +G + + L ++F TA+++YA++A A DYLLKP+D L + R ++ Sbjct: 61 KNGFDFLRALKEPA-FEVIFTTAYNQYAVQAIRFSALDYLLKPVDPDELRSAVNRFLKKA 119 Query: 120 SKQDVSLLPEN--------QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGK 171 + +L +N + + + + + + + + + K Sbjct: 120 NVHQNPVLFDNLVRNIAHKRASEFRLAVPYQDGVSFFTLDQIVRLQGEGNYTNIYIKSRK 179 Query: 172 EGFTELTLRTLESRT---PLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRR 228 TL+ E +R H+ +LVN + ++ + + + L +G V +SRR Sbjct: 180 PVLASKTLKHYEEMLTEFGFIRTHKSHLVNPKFIAKLMADHD---LVELLDGSRVEISRR 236 Query: 229 YLKSLKEAI 237 + + + Sbjct: 237 KKEEVLLQL 245 >UniRef50_Q3IEB4 Putative alginate biosynthesis regulatory protein n=2 Tax=Alteromonadales RepID=Q3IEB4_PSEHT Length = 233 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 71/240 (29%), Positives = 119/240 (49%), Gaps = 12/240 (5%) Query: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 + ++IVDDEPLAR L L +I + E SN E + +PD++FLD+ MP I+ Sbjct: 1 MNIVIVDDEPLARARLVRLLAA-QNIVVQNEASNGTEALALSKVNQPDLVFLDVDMPGIN 59 Query: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 GLE+ L+ P IVF+TA E+A+ A + +A YL+KP+ L+K + +L + Sbjct: 60 GLEVASELNKLAVPPAIVFITAHPEHALDALQLNAAGYLVKPVSAQSLQKVVEQLGRLNK 119 Query: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180 + +Q I + ++M+ + + ++ + G E +L+ Sbjct: 120 ------VHIQKQQTTKITYQLAGTLKSIEMECIYYFTAEEKYTKMVFKGG-SALIEQSLK 172 Query: 181 TLESRTP--LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLT-VPVSRRYLKSLKEAI 237 LE+ P +LR HR LVN + + +G + L+N + VSRR LK++K + Sbjct: 173 QLETLYPTHVLRVHRNTLVNKNKVVALHSLSSGSHAIELQNCQELLAVSRRELKTVKSTL 232 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.189 0.610 Lambda K H 0.267 0.0580 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,799,395,760 Number of Sequences: 3077464 Number of extensions: 95647807 Number of successful extensions: 407422 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 25747 Number of HSP's successfully gapped in prelim test: 19047 Number of HSP's that attempted gapping in prelim test: 308094 Number of HSP's gapped (non-prelim): 50814 length of query: 239 length of database: 1,040,396,356 effective HSP length: 125 effective length of query: 114 effective length of database: 655,713,356 effective search space: 74751322584 effective search space used: 74751322584 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.9 bits) S2: 92 (39.5 bits)