16/01/2012 04:21:16 : INFO  : Run start: Mon Jan 16 04:21:13 GMT 2012
16/01/2012 04:21:26 : INFO  : Initialised job
16/01/2012 04:21:30 : INFO  : Renaming log file 'phyre2_20120116_042112.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/4b46f79dcb0285f2/phyre_20120116_042112.log'
16/01/2012 04:21:33 : INFO  : Initialised job:
Sequence
>batch____
MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVSFVHQHRRK
LHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPHIERHVSVQASA
TNEEAINFYHRHFDVARVVLPRVLSIHQVKQLARVTPVPLEVFAFGSLCIMSEGRCYLSS
YLTGESPNTIGACSPARFVRWQQTPQGLESRLNEVLIDRYQDGENAGYPTLCKGRYLVDG
ERYHALEEPTSLNTLELLPELMAANIASVKIEGRQRSPAYVSQVAKVWRQAIDRCKADPQ
NFVPQSAWMETLGSMSEGTQTTLGAYHRKWQ

16/01/2012 04:21:35 : INFO  : Checked sequence
16/01/2012 04:21:41 : INFO  : Finding homologues with PSI-BLAST
16/01/2012 04:21:44 : INFO  : PSI-BLAST 3 iterations
16/01/2012 04:23:41 : INFO  : PSI-BLAST 5 iterations
16/01/2012 04:25:49 : INFO  : Finished PSI-BLAST
16/01/2012 04:25:54 : INFO  : Running Buildali to generate a3m file
16/01/2012 04:36:42 : INFO  : Converting to HMM
16/01/2012 04:36:47 : INFO  : Calibrating HMM
16/01/2012 04:37:11 : INFO  : Searching HMM database
16/01/2012 04:43:12 : INFO  : Finished buildali
16/01/2012 04:43:16 : INFO  : Predicting secondary structure
16/01/2012 04:43:34 : INFO  : Predicted secondary structure (PSI-Pred)
16/01/2012 04:43:37 : INFO  : Predicting Disordered regions
16/01/2012 04:43:46 : INFO  : Predicted Disorder (Disopred)
16/01/2012 04:43:49 : INFO  : Running memsat_svm check
16/01/2012 04:47:43 : INFO  : Globular protein
16/01/2012 04:47:46 : INFO  : Predicted Transmembrane (memsat_svm) ID '4b46f79dcb0285f2'
16/01/2012 04:47:49 : INFO  : Initialising fold library search
16/01/2012 04:47:56 : INFO  : Initialised search input
16/01/2012 04:48:01 : INFO  : Building Ensemble models
16/01/2012 04:48:07 : INFO  : Building hh.c2bdqA_.model.1.pdb
16/01/2012 04:48:40 : INFO  : Building hh.c3iwpK_.model.2.pdb
16/01/2012 04:49:04 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/4b46f79dcb0285f2/hh.c3iwpK_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/4b46f79dcb0285f2/c3iwpK_.2.pdb
16/01/2012 04:49:12 : INFO  : Building hh.d1xi3a_.model.3.pdb
16/01/2012 04:49:36 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/4b46f79dcb0285f2/hh.d1xi3a_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/4b46f79dcb0285f2/d1xi3a_.4.pdb
16/01/2012 04:49:44 : INFO  : Building hh.d1vlia2.model.4.pdb
16/01/2012 04:50:11 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/4b46f79dcb0285f2/hh.d1vlia2.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/4b46f79dcb0285f2/d1vlia2.5.pdb
16/01/2012 04:50:19 : INFO  : Building hh.c1vliA_.model.5.pdb
16/01/2012 04:50:44 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/4b46f79dcb0285f2/hh.c1vliA_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/4b46f79dcb0285f2/c1vliA_.6.pdb
16/01/2012 04:50:52 : INFO  : Building c2bdqA_.1.pdb
16/01/2012 04:51:22 : INFO  : Building c3iwpK_.2.pdb
16/01/2012 04:51:53 : INFO  : Building d1twda_.3.pdb
16/01/2012 04:52:22 : INFO  : Building d1xi3a_.4.pdb
16/01/2012 04:52:51 : INFO  : Building d1vlia2.5.pdb
16/01/2012 04:53:20 : INFO  : Building c1vliA_.6.pdb
16/01/2012 04:53:48 : INFO  : Building c3qjaA_.7.pdb
16/01/2012 04:54:18 : INFO  : Building d1a53a_.8.pdb
16/01/2012 04:54:47 : INFO  : Building d2zdra2.9.pdb
16/01/2012 04:55:16 : INFO  : Building c2c3zA_.10.pdb
16/01/2012 04:55:45 : INFO  : Building c3ktsA_.11.pdb
16/01/2012 04:56:14 : INFO  : Building c2ze3A_.12.pdb
16/01/2012 04:56:44 : INFO  : Building c3bleA_.13.pdb
16/01/2012 04:57:13 : INFO  : Building c1xuzA_.14.pdb
16/01/2012 04:57:41 : INFO  : Building c3ivuB_.15.pdb
16/01/2012 04:58:13 : INFO  : Building c3ih1A_.16.pdb
16/01/2012 04:58:42 : INFO  : Building c3igsB_.17.pdb
16/01/2012 04:59:11 : INFO  : Building c2ftpA_.18.pdb
16/01/2012 04:59:40 : INFO  : Building d1vzwa1.19.pdb
16/01/2012 05:00:10 : INFO  : Building c1yadD_.20.pdb
16/01/2012 05:03:20 : INFO  : Finished HH model building
16/01/2012 05:03:24 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
16/01/2012 05:05:17 : INFO  : html domain output complete ID '4b46f79dcb0285f2'
16/01/2012 05:51:43 : INFO  : Run end  : Mon Jan 16 05:51:41 GMT 2012
