Phyre 2 alignment of Q46938 with c3hqxA_

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Job Description | Q46938
Confidence | 31.21% | Date | Thu Jan 5 12:35:57 GMT 2012
Rank | 91 | Aligned Residues | 46
% Identity | 20% | Template | c3hqxA_
PDB info | PDB header:structural genomics, unknown function | Chain: A: PDB Molecule:upf0345 protein aciad0356; | PDBTitle: crystal structure of protein of unknown function (duf1255,pf06865)2 from acinetobacter sp. adp1
Resolution | 1.66 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |  | . | . | . |  | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | V | I | N | I | G | G | A | G | T | I | T | V | D | G | Q | . | C | Y | E | . | I | G | H | R | D | A | L | Y | V | G | K | G | A | K | E | V | V | F | A | S | I | D | T | G | T | P | A | K | F | Y | Y | N | C
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  | . |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  | . |  |  |  |  |
Template Sequence |  | X | E | I | I | S | G | E | C | R | V | K | I | A | D | S | T | E | S | E | L | F | R | A | G | Q | S | F | Y | V | P | G | N | S | L | F | . | . | . | . | K | I | E | T | D | E | V | L | . | D | Y | V | C | H
Template Known Secondary structure |  |  |  |  |  |  | S |  |  |  |  |  |  | T | T |  | S | S |  |  |  |  |  | T | T |  |  |  |  |  |  | T | T |  |  |  | . | . | . | . |  |  |  |  | S | S |  |  | . |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  | . |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 58 | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . |  |  |  |  | . | . | . | . | . | . | . | 100 |  | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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