18/01/2012 16:15:30 : INFO  : Run start: Wed Jan 18 16:15:28 GMT 2012
18/01/2012 16:15:41 : INFO  : Initialised job
18/01/2012 16:15:45 : INFO  : Renaming log file 'phyre2_20120118_161527.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/4aad2dc4166e23c8/phyre_20120118_161527.log'
18/01/2012 16:15:47 : INFO  : Initialised job:
Sequence
>batch____
MDVRQSIHSAHAKTLDTQGLRNEFLVEKVFVADEYTMVYSHIDRIIVGGIMPITKTVSVG
GEVGKQLGVSYFLERRELGVINIGGAGTITVDGQCYEIGHRDALYVGKGAKEVVFASIDT
GTPAKFYYNCAPAHTTYPTKKVTPDEVSPVTLGDNLTSNRRTINKYFVPDVLETCQLSMG
LTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDACVFHMMGQPQETRHIVMHNEQAVISP
SWSIHSGVGTKAYTFIWGMVGENQVFDDMDHVAVKDLR

18/01/2012 16:15:49 : INFO  : Checked sequence
18/01/2012 16:15:55 : INFO  : Finding homologues with PSI-BLAST
18/01/2012 16:15:58 : INFO  : PSI-BLAST 3 iterations
18/01/2012 16:18:01 : INFO  : PSI-BLAST 5 iterations
18/01/2012 16:19:17 : INFO  : Finished PSI-BLAST
18/01/2012 16:19:21 : INFO  : Running Buildali to generate a3m file
18/01/2012 16:23:49 : INFO  : Converting to HMM
18/01/2012 16:23:53 : INFO  : Calibrating HMM
18/01/2012 16:24:14 : INFO  : Searching HMM database
18/01/2012 16:30:29 : INFO  : Finished buildali
18/01/2012 16:30:32 : INFO  : Predicting secondary structure
18/01/2012 16:30:47 : INFO  : Predicted secondary structure (PSI-Pred)
18/01/2012 16:30:49 : INFO  : Predicting Disordered regions
18/01/2012 16:30:56 : INFO  : Predicted Disorder (Disopred)
18/01/2012 16:30:59 : INFO  : Running memsat_svm check
18/01/2012 16:38:22 : INFO  : Globular protein
18/01/2012 16:38:24 : INFO  : Predicted Transmembrane (memsat_svm) ID '4aad2dc4166e23c8'
18/01/2012 16:38:28 : INFO  : Initialising fold library search
18/01/2012 16:38:34 : INFO  : Initialised search input
18/01/2012 16:38:38 : INFO  : Building Ensemble models
18/01/2012 16:38:44 : INFO  : Building hh.d1xrua1.model.1.pdb
18/01/2012 16:39:14 : INFO  : Building d1xrua1.1.pdb
18/01/2012 16:39:42 : INFO  : Building d1ywka1.2.pdb
18/01/2012 16:40:11 : INFO  : Building c1ywkE_.3.pdb
18/01/2012 16:40:40 : INFO  : Building c2qjvB_.4.pdb
18/01/2012 16:41:12 : INFO  : Building d1sq4a_.5.pdb
18/01/2012 16:41:41 : INFO  : Building d1rc6a_.6.pdb
18/01/2012 16:42:10 : INFO  : Building c1sefA_.7.pdb
18/01/2012 16:42:39 : INFO  : Building d1sefa_.8.pdb
18/01/2012 16:43:08 : INFO  : Building d1sfna_.9.pdb
18/01/2012 16:43:37 : INFO  : Building d1y3ta1.10.pdb
18/01/2012 16:44:07 : INFO  : Building c3rnsA_.11.pdb
18/01/2012 16:44:37 : INFO  : Building c2d40C_.12.pdb
18/01/2012 16:45:08 : INFO  : Building d2phda1.13.pdb
18/01/2012 16:45:39 : INFO  : Building d2d40a1.14.pdb
18/01/2012 16:46:10 : INFO  : Building c3h7yA_.15.pdb
18/01/2012 16:46:40 : INFO  : Building c3myxA_.16.pdb
18/01/2012 16:47:10 : INFO  : Building c2vqaC_.17.pdb
18/01/2012 16:47:39 : INFO  : Building c2vpvA_.18.pdb
18/01/2012 16:48:08 : INFO  : Building c3bu7A_.19.pdb
18/01/2012 16:48:36 : INFO  : Building d3bu7a1.20.pdb
18/01/2012 16:49:39 : INFO  : Finished HH model building
18/01/2012 16:49:43 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
18/01/2012 16:50:52 : INFO  : html domain output complete ID '4aad2dc4166e23c8'
18/01/2012 18:22:54 : INFO  : Run end  : Wed Jan 18 18:22:53 GMT 2012
