Phyre 2 alignment of Q46938 with d2oyza1

Return to main results | Retrieve Phyre Job Id

Job Description | Q46938
Confidence | 32.75% | Date | Thu Jan 5 12:35:57 GMT 2012
Rank | 90 | Aligned Residues | 46
% Identity | 13% | Template | d2oyza1
SCOP info | Double-stranded beta-helix | RmlC-like cupins | VPA0057-like
Resolution | 1.71

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . |  |  | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | V | I | N | I | G | G | A | G | T | I | T | V | D | G | Q | C | Y | . | . | E | I | G | H | R | D | A | L | Y | V | G | K | G | A | K | E | V | V | F | A | S | I | D | T | G | T | P | A | K | F | Y | Y | N | C
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  | . |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  | . |  |  |  |  |
Template Sequence |  | X | T | V | V | K | G | A | L | V | V | K | R | V | G | E | A | D | W | T | T | Y | S | S | G | E | S | F | D | V | E | G | N | S | S | F | . | . | . | . | E | L | Q | V | K | D | A | T | . | A | Y | L | C | E
Template Known Secondary structure |  |  |  |  |  |  | S |  |  |  |  |  |  | T | T |  | S | S |  |  |  |  |  | T | T |  |  |  |  |  |  | S | S |  |  |  | . | . | . | . |  |  |  |  | S | S |  |  | . |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  | . |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 45 | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |  |  |  |  | 80 | . | . | . | . | . | . | . |  | . | . | 90 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions