Phyre 2 Results for Q46938

Email | l.a.kelley@imperial.ac.uk
Description | Q46938
Date | Thu Jan 5 12:35:57 GMT 2012
Unique Job ID | 4aad2dc4166e23c8

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | d1xrua1 |
|  | 100.0 | 95 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:KduI-like
2 | d1ywka1 |
|  | 100.0 | 54 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:KduI-like
3 | c1ywkE_ |
|  | 100.0 | 54 | PDB header:isomerase Chain: E: PDB Molecule:4-deoxy-l-threo-5-hexosulose-uronate ketol- PDBTitle: crystal structure of 4-deoxy-1-threo-5-hexosulose-uronate2 ketol-isomerase from enterococcus faecalis
4 | c2qjvB_ |
|  | 100.0 | 17 | PDB header:isomerase Chain: B: PDB Molecule:uncharacterized iolb-like protein; PDBTitle: crystal structure of an iolb-like protein (stm4420) from salmonella2 typhimurium lt2 at 1.90 a resolution
5 | d1sq4a_ |
|  | 98.9 | 13 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:YlbA-like
6 | d1rc6a_ |
|  | 98.9 | 17 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:YlbA-like
7 | c1sefA_ |
|  | 98.8 | 9 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: crystal structure of cupin domain protein ef2996 from enterococcus2 faecalis
8 | d1sefa_ |
|  | 98.8 | 9 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:YlbA-like
9 | d1sfna_ |
|  | 98.6 | 11 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:YlbA-like
10 | d1y3ta1 |
|  | 98.4 | 17 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Quercetin 2,3-dioxygenase-like
11 | c3rnsA_ |
|  | 98.3 | 13 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cupin 2 conserved barrel domain protein; PDBTitle: cupin 2 conserved barrel domain protein from leptotrichia buccalis
12 | c2d40C_ |
|  | 98.1 | 13 | PDB header:oxidoreductase Chain: C: PDB Molecule:putative gentisate 1,2-dioxygenase; PDBTitle: crystal structure of z3393 from escherichia coli o157:h7
13 | d2phda1 |
|  | 98.1 | 13 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Gentisate 1,2-dioxygenase-like
14 | d2d40a1 |
|  | 98.0 | 14 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Gentisate 1,2-dioxygenase-like
15 | c3h7yA_ |
|  | 98.0 | 13 | PDB header:biosynthetic protein Chain: A: PDB Molecule:bacilysin biosynthesis protein bacb; PDBTitle: crystal structure of bacb, an enzyme involved in bacilysin synthesis,2 in tetragonal form
16 | c3myxA_ |
|  | 97.8 | 13 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein pspto_0244; PDBTitle: crystal structure of a pspto_0244 (protein with unknown function which2 belongs to pfam duf861 family) from pseudomonas syringae pv. tomato3 str. dc3000 at 1.30 a resolution
17 | c2vqaC_ |
|  | 97.5 | 15 | PDB header:metal-binding protein Chain: C: PDB Molecule:sll1358 protein; PDBTitle: protein-folding location can regulate mn versus cu- or zn-2 binding. crystal structure of mnca.
18 | c2vpvA_ |
|  | 97.4 | 14 | PDB header:cell cycle Chain: A: PDB Molecule:protein mif2; PDBTitle: dimerization domain of mif2p
19 | c3bu7A_ |
|  | 97.4 | 20 | PDB header:oxidoreductase Chain: A: PDB Molecule:gentisate 1,2-dioxygenase; PDBTitle: crystal structure and biochemical characterization of gdosp,2 a gentisate 1,2-dioxygenase from silicibacter pomeroyi
20 | d3bu7a1 |
|  | 97.4 | 20 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Gentisate 1,2-dioxygenase-like
21 | c2gu9B_ |
| not modelled | 97.4 | 15 | PDB header:immune system Chain: B: PDB Molecule:tetracenomycin polyketide synthesis protein; PDBTitle: crystal structure of xc5357 from xanthomonas campestris: a2 putative tetracenomycin polyketide synthesis protein3 adopting a novel cupin subfamily structure
22 | d1j58a_ |
| not modelled | 97.3 | 15 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein
23 | c3cewA_ |
| not modelled | 97.1 | 22 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized cupin protein; PDBTitle: crystal structure of a cupin protein (bf4112) from bacteroides2 fragilis. northeast structural genomics consortium target bfr205
24 | c2cauA_ |
| not modelled | 97.0 | 13 | PDB header:plant protein Chain: A: PDB Molecule:protein (canavalin); PDBTitle: canavalin from jack bean
25 | c3ht2A_ |
| not modelled | 96.9 | 19 | PDB header:lyase Chain: A: PDB Molecule:remf protein; PDBTitle: zink containing polyketide cyclase remf from streptomyces2 resistomycificus
26 | c3jzvA_ |
| not modelled | 96.9 | 16 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein rru_a2000; PDBTitle: crystal structure of rru_a2000 from rhodospirillum rubrum: a cupin-22 domain.
27 | c3i7dB_ |
| not modelled | 96.9 | 18 | PDB header:isomerase Chain: B: PDB Molecule:sugar phosphate isomerase; PDBTitle: crystal structure of sugar phosphate isomerase from a cupin2 superfamily spo2919 from silicibacter pomeroyi (yp_168127.1) from3 silicibacter pomeroyi dss-3 at 2.30 a resolution
28 | d2pyta1 |
| not modelled | 96.9 | 18 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:EutQ-like
29 | c3lwcA_ |
| not modelled | 96.8 | 28 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of structural genomics, unknown function2 (yp_766765.1) from rhizobium leguminosarum bv. viciae 3841 at 1.40 a3 resolution
30 | d1y9qa2 |
| not modelled | 96.8 | 12 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Probable transcriptional regulator VC1968, C-terminal domain
31 | d2arca_ |
| not modelled | 96.7 | 20 | Fold:Double-stranded beta-helix Superfamily:Regulatory protein AraC Family:Regulatory protein AraC
32 | c2oa2A_ |
| not modelled | 96.7 | 18 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:bh2720 protein; PDBTitle: crystal structure of bh2720 (10175341) from bacillus halodurans at2 1.41 a resolution
33 | d1v70a_ |
| not modelled | 96.6 | 19 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:TM1287-like
34 | d1lr5a_ |
| not modelled | 96.6 | 15 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein
35 | c3kgzA_ |
| not modelled | 96.5 | 16 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cupin 2 conserved barrel domain protein; PDBTitle: crystal structure of a cupin 2 conserved barrel domain protein from2 rhodopseudomonas palustris
36 | c3ibmB_ |
| not modelled | 96.5 | 14 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of cupin 2 domain-containing protein hhal_0468 from2 halorhodospira halophila
37 | c3h8uA_ |
| not modelled | 96.4 | 16 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized conserved protein with double-stranded PDBTitle: crystal structure of uncharacterized conserved protein with double-2 stranded beta-helix domain (yp_001338853.1) from klebsiella3 pneumoniae subsp. pneumoniae mgh 78578 at 1.80 a resolution
38 | c3l2hD_ |
| not modelled | 96.3 | 19 | PDB header:isomerase Chain: D: PDB Molecule:putative sugar phosphate isomerase; PDBTitle: crystal structure of putative sugar phosphate isomerase (afe_0303)2 from acidithiobacillus ferrooxidans atcc 23270 at 1.85 a resolution
39 | c2pfwB_ |
| not modelled | 96.2 | 16 | PDB header:unknown function Chain: B: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of a rmlc-like cupin (sfri_3105) from shewanella2 frigidimarina ncimb 400 at 1.90 a resolution
40 | c3fjsC_ |
| not modelled | 96.1 | 24 | PDB header:biosynthetic protein Chain: C: PDB Molecule:uncharacterized protein with rmlc-like cupin fold; PDBTitle: crystal structure of a putative biosynthetic protein with rmlc-like2 cupin fold (reut_b4087) from ralstonia eutropha jmp134 at 1.90 a3 resolution
41 | d1o4ta_ |
| not modelled | 96.1 | 17 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:TM1287-like
42 | d2b8ma1 |
| not modelled | 95.7 | 20 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:MJ0764-like
43 | c3d82A_ |
| not modelled | 95.5 | 15 | PDB header:metal binding protein Chain: A: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of a cupin-2 domain containing protein (sfri_3543)2 from shewanella frigidimarina ncimb 400 at 2.05 a resolution
44 | c2o8qA_ |
| not modelled | 95.4 | 10 | PDB header:metal binding protein Chain: A: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a protein with a cupin-like fold and unknown2 function (bxe_c0505) from burkholderia xenovorans lb400 at 1.55 a3 resolution
45 | d1yhfa1 |
| not modelled | 94.9 | 13 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:TM1287-like
46 | d2f4pa1 |
| not modelled | 94.6 | 12 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:TM1287-like
47 | c2eaaB_ |
| not modelled | 94.5 | 12 | PDB header:plant protein Chain: B: PDB Molecule:7s globulin-3; PDBTitle: crystal structure of adzuki bean 7s globulin-3
48 | c2q30C_ |
| not modelled | 94.2 | 17 | PDB header:unknown function Chain: C: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a rmlc-like cupin protein (dde_2303) from2 desulfovibrio desulfuricans subsp. at 1.94 a resolution
49 | c3bcwB_ |
| not modelled | 94.0 | 18 | PDB header:unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a duf861 family protein with a rmlc-like cupin2 fold (bb1179) from bordetella bronchiseptica rb50 at 1.60 a3 resolution
50 | c2i45C_ |
| not modelled | 94.0 | 11 | PDB header:structural genomics, unknown function Chain: C: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of protein nmb1881 from neisseria meningitidis
51 | d1uika1 |
| not modelled | 93.8 | 20 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein
52 | c2ozjB_ |
| not modelled | 93.6 | 18 | PDB header:unknown function Chain: B: PDB Molecule:cupin 2, conserved barrel; PDBTitle: crystal structure of a cupin superfamily protein (dsy2733) from2 desulfitobacterium hafniense dcb-2 at 1.60 a resolution
53 | d1o5ua_ |
| not modelled | 93.5 | 23 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Hypothetical protein TM1112
54 | d1dgwa_ |
| not modelled | 93.4 | 15 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein
55 | d1vj2a_ |
| not modelled | 93.1 | 15 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:TM1459-like
56 | d1uija1 |
| not modelled | 92.6 | 19 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein
57 | c1ey2A_ |
| not modelled | 92.5 | 20 | PDB header:oxidoreductase Chain: A: PDB Molecule:homogentisate 1,2-dioxygenase; PDBTitle: human homogentisate dioxygenase with fe(ii)
58 | d1eyba_ |
| not modelled | 92.4 | 20 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Homogentisate dioxygenase
59 | d1pmia_ |
| not modelled | 92.1 | 26 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Type I phosphomannose isomerase
60 | c2oziA_ |
| not modelled | 91.9 | 16 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein rpa4178; PDBTitle: structural genomics, the crystal structure of a putative2 protein rpa4178 from rhodopseudomonas palustris cga009
61 | d1j3pa_ |
| not modelled | 91.3 | 23 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Glucose-6-phosphate isomerase, GPI
62 | c2fqpD_ |
| not modelled | 90.7 | 11 | PDB header:metal binding protein Chain: D: PDB Molecule:hypothetical protein bp2299; PDBTitle: crystal structure of a cupin domain (bp2299) from bordetella pertussis2 tohama i at 1.80 a resolution
63 | c3s7eB_ |
| not modelled | 88.1 | 14 | PDB header:allergen Chain: B: PDB Molecule:allergen ara h 1, clone p41b; PDBTitle: crystal structure of ara h 1
64 | c1uijA_ |
| not modelled | 87.6 | 15 | PDB header:sugar binding protein Chain: A: PDB Molecule:beta subunit of beta conglycinin; PDBTitle: crystal structure of soybean beta-conglycinin beta2 homotrimer (i122m/k124w)
65 | c3h1yA_ |
| not modelled | 87.4 | 16 | PDB header:isomerase Chain: A: PDB Molecule:mannose-6-phosphate isomerase; PDBTitle: crystal structure of mannose 6-phosphate isomerase from2 salmonella typhimurium bound to substrate (f6p)and metal3 atom (zn)
66 | d1juha_ |
| not modelled | 86.5 | 11 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Quercetin 2,3-dioxygenase-like
67 | d1zx5a1 |
| not modelled | 86.2 | 11 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Type I phosphomannose isomerase
68 | d1x82a_ |
| not modelled | 86.1 | 18 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Glucose-6-phosphate isomerase, GPI
69 | c2opkC_ |
| not modelled | 85.3 | 20 | PDB header:isomerase Chain: C: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a putative mannose-6-phosphate isomerase2 (reut_a1446) from ralstonia eutropha jmp134 at 2.10 a resolution
70 | d1qwra_ |
| not modelled | 85.1 | 11 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Type I phosphomannose isomerase
71 | c3kglB_ |
| not modelled | 83.8 | 21 | PDB header:plant protein Chain: B: PDB Molecule:cruciferin; PDBTitle: crystal structure of procruciferin, 11s globulin from2 brassica napus
72 | c3es4B_ |
| not modelled | 83.2 | 15 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein duf861 with a rmlc-like cupin fold; PDBTitle: crystal structure of protein of unknown function (duf861) with a rmlc-2 like cupin fold (17741406) from agrobacterium tumefaciens str. c583 (dupont) at 1.64 a resolution
73 | c2bnoA_ |
| not modelled | 78.1 | 12 | PDB header:oxidoreductase Chain: A: PDB Molecule:epoxidase; PDBTitle: the structure of hydroxypropylphosphonic acid epoxidase2 from s. wedmorenis.
74 | c1y9qA_ |
| not modelled | 70.8 | 12 | PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, hth_3 family; PDBTitle: crystal structure of hth_3 family transcriptional regulator2 from vibrio cholerae
75 | d1od5a2 |
| not modelled | 68.5 | 17 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein
76 | c3eo6B_ |
| not modelled | 64.9 | 13 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:protein of unknown function (duf1255); PDBTitle: crystal structure of protein of unknown function (duf1255)2 (afe_2634) from acidithiobacillus ferrooxidans ncib8455 at3 0.97 a resolution
77 | c2qnkA_ |
| not modelled | 64.1 | 16 | PDB header:oxidoreductase Chain: A: PDB Molecule:3-hydroxyanthranilate 3,4-dioxygenase; PDBTitle: crystal structure of human 3-hydroxyanthranilate 3,4-dioxygenase
78 | d1yfua1 |
| not modelled | 63.0 | 13 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:3-hydroxyanthranilic acid dioxygenase-like
79 | c2xlfA_ |
| not modelled | 61.7 | 19 | PDB header:metal binding protein Chain: A: PDB Molecule:sll1785 protein; PDBTitle: structure and metal-loading of a soluble periplasm cupro-protein:2 apo-cuca-closed (semet)
80 | c3es1A_ |
| not modelled | 61.6 | 19 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of protein with a cupin-like fold and unknown2 function (yp_001165807.1) from novosphingobium aromaticivorans dsm3 12444 at 1.91 a resolution
81 | c1cauB_ |
| not modelled | 61.4 | 28 | PDB header:seed storage protein Chain: B: PDB Molecule:canavalin; PDBTitle: determination of three crystal structures of canavalin by molecular2 replacement
82 | d2phla2 |
| not modelled | 59.5 | 10 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein
83 | c3qacA_ |
| not modelled | 57.9 | 17 | PDB header:plant protein Chain: A: PDB Molecule:11s globulin seed storage protein; PDBTitle: structure of amaranth 11s proglobulin seed storage protein from2 amaranthus hypochondriacus l.
84 | d2et1a1 |
| not modelled | 53.6 | 16 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein
85 | d1fxza1 |
| not modelled | 51.3 | 15 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein
86 | d1uija2 |
| not modelled | 48.4 | 11 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein
87 | d2bnma2 |
| not modelled | 48.3 | 10 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:TM1459-like
88 | c2xdvA_ |
| not modelled | 43.2 | 15 | PDB header:nuclear protein Chain: A: PDB Molecule:myc-induced nuclear antigen; PDBTitle: crystal structure of the catalytic domain of flj14393
89 | c2k5hA_ |
| not modelled | 32.8 | 21 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved protein; PDBTitle: solution nmr structure of protein encoded by mth693 from2 methanobacterium thermoautotrophicum: northeast structural3 genomics consortium target tt824a
90 | d2oyza1 |
| not modelled | 32.7 | 13 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:VPA0057-like
91 | c3hqxA_ |
| not modelled | 31.2 | 20 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0345 protein aciad0356; PDBTitle: crystal structure of protein of unknown function (duf1255,pf06865)2 from acinetobacter sp. adp1
92 | d1zrra1 |
| not modelled | 30.8 | 13 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Acireductone dioxygenase
93 | d2exda1 |
| not modelled | 30.7 | 13 | Fold:OB-fold Superfamily:NfeD domain-like Family:NfeD domain-like
94 | d1vrba1 |
| not modelled | 30.4 | 20 | Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:Asparaginyl hydroxylase-like
95 | c2ko2A_ |
| not modelled | 29.0 | 33 | PDB header:membrane protein Chain: A: PDB Molecule:reticulon-4; PDBTitle: nogo66
96 | c3kscD_ |
| not modelled | 28.7 | 14 | PDB header:plant protein Chain: D: PDB Molecule:lega class; PDBTitle: crystal structure of pea prolegumin, an 11s seed globulin2 from pisum sativum l.
97 | c3al6A_ |
| not modelled | 26.3 | 13 | PDB header:unknown function Chain: A: PDB Molecule:jmjc domain-containing protein c2orf60; PDBTitle: crystal structure of human tyw5
98 | d1fxza2 |
| not modelled | 25.4 | 7 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein
99 | c2d5fB_ |
| not modelled | 23.9 | 10 | PDB header:plant protein Chain: B: PDB Molecule:glycinin a3b4 subunit; PDBTitle: crystal structure of recombinant soybean proglycinin a3b4 subunit, its2 comparison with mature glycinin a3b4 subunit, responsible for hexamer3 assembly
100 | d1od5a1 |
| not modelled | 23.4 | 20 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein
101 | c2b9sB_ |
| not modelled | 21.4 | 50 | PDB header:isomerase/dna Chain: B: PDB Molecule:dna topoisomerase i-like protein; PDBTitle: crystal structure of heterodimeric l. donovani2 topoisomerase i-vanadate-dna complex