BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (684 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P15038 Helicase IV n=169 Tax=cellular organisms RepID=H... 1406 0.0 UniRef50_A9ZEX9 Helicase IV (75 kDa helicase) n=15 Tax=Enterobac... 940 0.0 UniRef50_D0YXK5 DNA helicase IV n=1 Tax=Photobacterium damselae ... 403 e-110 UniRef50_A5EZU3 Helicase IV n=56 Tax=Vibrionales RepID=A5EZU3_VIBC3 402 e-110 UniRef50_Q6LST7 Hypothetical helicase IV n=5 Tax=Gammaproteobact... 402 e-110 UniRef50_Q5E4C9 DNA helicase IV n=3 Tax=Aliivibrio RepID=Q5E4C9_... 395 e-108 UniRef50_D0IB53 DNA helicase IV n=1 Tax=Grimontia hollisae CIP 1... 369 e-100 UniRef50_A4CC59 DNA helicase IV n=1 Tax=Pseudoalteromonas tunica... 358 3e-97 UniRef50_C4LER9 UvrD/REP helicase n=1 Tax=Tolumonas auensis DSM ... 342 4e-92 UniRef50_A6FAM2 Hypothetical helicase IV n=1 Tax=Moritella sp. P... 316 2e-84 UniRef50_Q3IIK2 Putative helicase IV n=1 Tax=Pseudoalteromonas h... 288 3e-76 UniRef50_Q2BNY9 Helicase IV n=1 Tax=Neptuniibacter caesariensis ... 258 5e-67 UniRef50_Q481U8 Helicase IV n=1 Tax=Colwellia psychrerythraea 34... 258 8e-67 UniRef50_A3D9J8 UvrD/REP helicase n=11 Tax=Gammaproteobacteria R... 245 4e-63 UniRef50_A8FVJ1 UvrD/REP helicase n=1 Tax=Shewanella sediminis H... 243 3e-62 UniRef50_C4FEN7 Putative uncharacterized protein n=3 Tax=Bifidob... 224 6e-57 UniRef50_Q15TK2 UvrD/REP helicase n=1 Tax=Pseudoalteromonas atla... 216 2e-54 UniRef50_A1A2S5 Putative helicase IV n=2 Tax=Bifidobacterium Rep... 212 4e-53 UniRef50_B9NSL7 UvrD/REP helicase n=1 Tax=Rhodobacteraceae bacte... 210 1e-52 UniRef50_B0TT01 UvrD/REP helicase n=4 Tax=Shewanella RepID=B0TT0... 206 2e-51 UniRef50_C4LDL2 UvrD/REP helicase n=1 Tax=Tolumonas auensis DSM ... 205 4e-51 UniRef50_A7ZI15 Helicase, UvrD family n=1 Tax=Escherichia coli E... 205 5e-51 UniRef50_Q1Q866 UvrD/REP helicase n=4 Tax=Gammaproteobacteria Re... 199 2e-49 UniRef50_A4WTK0 UvrD/REP helicase n=8 Tax=Rhodobacterales RepID=... 196 3e-48 UniRef50_B1CC30 Putative uncharacterized protein n=1 Tax=Anaerof... 194 1e-47 UniRef50_A4ALZ1 Helicase IV n=1 Tax=Flavobacteriales bacterium H... 192 3e-47 UniRef50_A3X5L1 Helicase IV n=1 Tax=Roseobacter sp. MED193 RepID... 192 4e-47 UniRef50_A5UP48 DNA helicase, UvrD/REP helicase family n=2 Tax=M... 190 2e-46 UniRef50_B9AEJ9 Putative uncharacterized protein n=2 Tax=Methano... 189 3e-46 UniRef50_D2MH56 Helicase IV n=1 Tax=Candidatus Poribacteria sp. ... 184 9e-45 UniRef50_UPI000179C790 UPI000179C790 related cluster n=3 Tax=Bos... 181 7e-44 UniRef50_UPI0000E88005 helicase IV n=1 Tax=Methylophilales bacte... 180 2e-43 UniRef50_B4SNF4 UvrD/REP helicase n=2 Tax=Stenotrophomonas malto... 173 2e-41 UniRef50_B8L506 UvrD/REP helicase n=2 Tax=Bacteria RepID=B8L506_... 171 7e-41 UniRef50_C5A9C5 UvrD/REP helicase n=2 Tax=Proteobacteria RepID=C... 170 2e-40 UniRef50_UPI0001BCB37F UvrD/REP helicase n=1 Tax=Fusobacterium p... 169 4e-40 UniRef50_C6AVQ0 UvrD/REP helicase n=2 Tax=Alphaproteobacteria Re... 169 5e-40 UniRef50_C4L6T7 UvrD/REP helicase n=1 Tax=Exiguobacterium sp. AT... 167 8e-40 UniRef50_UPI00017C3C60 PREDICTED: hypothetical protein n=1 Tax=B... 166 3e-39 UniRef50_A1VWJ4 UvrD/REP helicase n=1 Tax=Polaromonas naphthalen... 162 6e-38 UniRef50_Q9PKH5 UvrD/REP helicase family protein n=5 Tax=Bacteri... 161 6e-38 UniRef50_Q8PKB0 Helicase IV n=1 Tax=Xanthomonas axonopodis pv. c... 158 7e-37 UniRef50_B4EEE2 Putative helicase n=1 Tax=Burkholderia cenocepac... 153 2e-35 UniRef50_UPI000174264A helicase, UvrD/REP family protein n=2 Tax... 152 4e-35 UniRef50_C9RMS6 UvrD/REP helicase n=1 Tax=Fibrobacter succinogen... 132 3e-29 UniRef50_B7IZB5 Helicase, UvrD/Rep family n=5 Tax=Bacillus cereu... 131 7e-29 UniRef50_Q8Q0V3 Superfamily I DNA and RNA helicase n=2 Tax=cellu... 131 8e-29 UniRef50_Q5E4T7 Superfamily I DNA and RNA helicase n=1 Tax=Vibri... 131 1e-28 UniRef50_C3WE38 UvrD/REP helicase n=1 Tax=Fusobacterium mortifer... 130 2e-28 UniRef50_UPI00019094F3 DNA helicase IV n=1 Tax=Rhizobium etli IE... 130 2e-28 UniRef50_Q3IPC8 Probable helicase n=1 Tax=Natronomonas pharaonis... 128 8e-28 UniRef50_A5UN47 Helicase, UvrD/REP family n=1 Tax=Methanobreviba... 127 2e-27 UniRef50_UPI0001C3187F UvrD/REP helicase n=1 Tax=Conexibacter wo... 125 5e-27 UniRef50_UPI0001788A90 UvrD/REP helicase n=1 Tax=Geobacillus sp.... 124 1e-26 UniRef50_C7NQZ8 UvrD/REP helicase n=1 Tax=Halorhabdus utahensis ... 122 7e-26 UniRef50_A7KV33 PcrA helicase n=1 Tax=Bacillus phage 0305phi8-36... 120 1e-25 UniRef50_A8MLJ7 ATP-dependent DNA helicase PcrA n=3 Tax=Firmicut... 120 2e-25 UniRef50_Q2S550 ATP-dependent DNA helicase pcrA n=2 Tax=Rhodothe... 119 3e-25 UniRef50_B8I5U1 ATP-dependent DNA helicase PcrA n=14 Tax=Firmicu... 119 4e-25 UniRef50_Q4FPM1 DNA helicase II n=5 Tax=Bacteria RepID=Q4FPM1_PELUB 119 5e-25 UniRef50_Q83GZ5 ATP-dependent DNA helicase n=2 Tax=Tropheryma wh... 119 5e-25 UniRef50_B1AJE0 ATP-dependent DNA helicase PcrA n=15 Tax=Ureapla... 119 5e-25 UniRef50_Q6KHF5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma mo... 119 5e-25 UniRef50_B4CU41 UvrD/REP helicase n=1 Tax=Chthoniobacter flavus ... 118 9e-25 UniRef50_A4XKK0 ATP-dependent DNA helicase PcrA n=2 Tax=Clostrid... 117 1e-24 UniRef50_Q018Z5 ATP-dependent DNA helicase (ISS) n=1 Tax=Ostreoc... 117 2e-24 UniRef50_C2L0R7 ATP-dependent DNA helicase PcrA n=1 Tax=Oribacte... 115 4e-24 UniRef50_C4Z8S4 ATP-dependent DNA helicase PcrA n=17 Tax=Firmicu... 115 6e-24 UniRef50_C8WV10 UvrD/REP helicase n=2 Tax=Alicyclobacillus acido... 115 6e-24 UniRef50_A6DKH4 UvrD/REP helicase n=1 Tax=Lentisphaera araneosa ... 115 6e-24 UniRef50_C4ZAR0 ATP-dependent DNA helicase n=4 Tax=Clostridiales... 115 8e-24 UniRef50_Q5PB91 DNA helicase II n=20 Tax=Rickettsiales RepID=Q5P... 114 1e-23 UniRef50_Q600N7 ATP-dependent DNA helicase n=6 Tax=Mycoplasma Re... 114 1e-23 UniRef50_Q1DC55 ATP-dependent DNA helicase PcrA n=2 Tax=Cystobac... 114 1e-23 UniRef50_C6HUX3 Putative ATP-dependent DNA helicase, UvrD/REP fa... 114 1e-23 UniRef50_C2L1F3 Possible ATP-dependent DNA helicase PcrA n=1 Tax... 114 1e-23 UniRef50_A9UZH4 Predicted protein n=1 Tax=Monosiga brevicollis R... 114 1e-23 UniRef50_C1VDI7 DNA/RNA helicase, superfamily I n=1 Tax=Halogeom... 114 2e-23 UniRef50_UPI0001693CE1 UvrD/REP helicase n=1 Tax=Paenibacillus l... 113 3e-23 UniRef50_UPI00016B20E8 ATP-dependent DNA helicase PcrA n=1 Tax=c... 112 5e-23 UniRef50_B2S250 Rep helicase, single-stranded DNA-dependent ATPa... 112 5e-23 UniRef50_Q8EUN0 ATP-dependent DNA helicase n=1 Tax=Mycoplasma pe... 112 5e-23 UniRef50_C2KR35 ATP-dependent DNA helicase n=3 Tax=Mobiluncus Re... 112 6e-23 UniRef50_Q67LG5 ATP-dependent DNA helicase n=1 Tax=Symbiobacteri... 112 7e-23 UniRef50_Q1Q555 Similar to DNA helicase n=1 Tax=Candidatus Kuene... 112 7e-23 UniRef50_C7H111 ATP-dependent DNA helicase PcrA n=1 Tax=Eubacter... 110 1e-22 UniRef50_Q72IS0 DNA helicase uvrD n=3 Tax=Thermus thermophilus R... 110 1e-22 UniRef50_C7MAK0 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria... 110 1e-22 UniRef50_C8WBZ1 UvrD/REP helicase n=7 Tax=Alphaproteobacteria Re... 110 2e-22 UniRef50_A6VEA1 ATP-dependent DNA helicase Rep n=102 Tax=Proteob... 110 2e-22 UniRef50_A6GG96 UvrD/REP helicase n=1 Tax=Plesiocystis pacifica ... 110 2e-22 UniRef50_Q4A5L9 Atp-dependent helicase n=2 Tax=Mycoplasma synovi... 110 2e-22 UniRef50_B0MU18 Putative uncharacterized protein n=2 Tax=Bactero... 110 3e-22 UniRef50_D1VUE5 ATP-dependent DNA helicase PcrA n=1 Tax=Peptonip... 109 3e-22 UniRef50_B3QYS3 UvrD/REP helicase n=9 Tax=Chlorobiaceae RepID=B3... 109 3e-22 UniRef50_A9M0G6 ATP-dependent DNA helicase n=38 Tax=Betaproteoba... 109 3e-22 UniRef50_A7HBX8 UvrD/REP helicase n=7 Tax=Cystobacterineae RepID... 109 3e-22 UniRef50_A6DNQ6 UvrD/REP helicase n=1 Tax=Lentisphaera araneosa ... 109 3e-22 UniRef50_UPI0000E87DAA UvrD/REP helicase n=1 Tax=Methylophilales... 109 4e-22 UniRef50_D0RN21 ATP-dependent DNA helicase PcrA n=1 Tax=alpha pr... 109 4e-22 UniRef50_D1KF50 SRS2 n=6 Tax=rosids RepID=D1KF50_ARATH 109 5e-22 UniRef50_C6CW81 UvrD/REP helicase n=2 Tax=Bacillales RepID=C6CW8... 108 5e-22 UniRef50_C9XK50 ATP-dependent DNA helicase n=5 Tax=Clostridium R... 108 5e-22 UniRef50_C0VSX9 ATP-dependent DNA helicase n=2 Tax=Corynebacteri... 108 5e-22 UniRef50_Q5WF16 UvrD/REP family ATP-dependent DNA helicase n=1 T... 108 6e-22 UniRef50_B2A3D2 UvrD/REP helicase n=1 Tax=Natranaerobius thermop... 108 6e-22 UniRef50_A6GBC2 UvrD/REP helicase n=1 Tax=Plesiocystis pacifica ... 108 6e-22 UniRef50_C6JPT7 DNA helicase II n=1 Tax=Fusobacterium varium ATC... 108 9e-22 UniRef50_A4RXK7 Predicted protein (Fragment) n=1 Tax=Ostreococcu... 108 9e-22 UniRef50_A8SUE8 Putative uncharacterized protein n=4 Tax=Clostri... 108 9e-22 UniRef50_B8GFE8 UvrD/REP helicase n=1 Tax=Methanosphaerula palus... 108 9e-22 UniRef50_A9KP66 UvrD/REP helicase n=12 Tax=Bacteria RepID=A9KP66... 107 1e-21 UniRef50_D1R4U3 Putative uncharacterized protein n=1 Tax=Parachl... 107 1e-21 UniRef50_B7GHR4 Superfamily I helicase domain and RecB family ex... 107 2e-21 UniRef50_D2NR24 Superfamily I DNA and RNA helicase n=17 Tax=Bact... 107 2e-21 UniRef50_A5UVF1 ATP-dependent DNA helicase, Rep family n=6 Tax=C... 107 2e-21 UniRef50_C6D4S8 ATP-dependent DNA helicase PcrA n=46 Tax=Firmicu... 107 2e-21 UniRef50_Q6ZHK2 Os07g0492100 protein n=4 Tax=Poaceae RepID=Q6ZHK... 107 2e-21 UniRef50_A1VZC5 ATP-dependent DNA helicase, putative n=30 Tax=Ep... 107 2e-21 UniRef50_B5YF03 ATP-dependent DNA helicase PcrA n=2 Tax=Dictyogl... 106 3e-21 UniRef50_C8PTM7 ATP-dependent DNA helicase PcrA n=1 Tax=Treponem... 106 3e-21 UniRef50_UPI000051001F putative ATP-dependent DNA helicase II n=... 106 3e-21 UniRef50_B0SSS8 ATP-dependent DNA helicase PcrA n=6 Tax=Leptospi... 106 3e-21 UniRef50_A8HYL6 DNA helicase II n=8 Tax=Rhizobiales RepID=A8HYL6... 106 4e-21 UniRef50_B1XW04 UvrD/REP helicase n=41 Tax=Bacteria RepID=B1XW04... 105 4e-21 UniRef50_Q256I8 DNA/RNA helicase n=17 Tax=Chlamydiales RepID=Q25... 105 4e-21 UniRef50_C0CLZ2 Putative uncharacterized protein n=2 Tax=Clostri... 105 4e-21 UniRef50_B2UPY5 UvrD/REP helicase n=2 Tax=Verrucomicrobia RepID=... 105 5e-21 UniRef50_A0LDC5 ATP-dependent DNA helicase, Rep family n=1 Tax=M... 105 6e-21 UniRef50_C3JBX6 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria... 105 6e-21 UniRef50_A1WZS5 ATP-dependent DNA helicase UvrD n=3 Tax=Gammapro... 105 6e-21 UniRef50_B3R0N7 ATP-dependent DNA helicase n=1 Tax=Candidatus Ph... 105 6e-21 UniRef50_C1E652 ATP-dependent DNA helicase n=2 Tax=Micromonas Re... 105 6e-21 UniRef50_C8W206 ATP-dependent DNA helicase PcrA n=2 Tax=Clostrid... 105 6e-21 UniRef50_Q0SMP9 Rep helicase, single-stranded DNA-dependent ATPa... 105 8e-21 UniRef50_B7AA42 UvrD/REP helicase n=1 Tax=Thermus aquaticus Y51M... 104 9e-21 UniRef50_C7HU69 ATP-dependent DNA helicase PcrA n=2 Tax=Anaeroco... 104 1e-20 UniRef50_D0LJZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum D... 104 1e-20 UniRef50_C0R2D4 ATP-dependent DNA helicase n=4 Tax=Brachyspira R... 104 1e-20 UniRef50_B1GYW6 ATP-dependent UvrD family DNA helicase PcrA n=1 ... 104 1e-20 UniRef50_C5C915 ATP-dependent DNA helicase PcrA n=7 Tax=Actinomy... 104 1e-20 UniRef50_B0KVA6 Putative UvrD/REP helicase n=1 Tax=uncultured ca... 104 1e-20 UniRef50_Q6GFF2 ATP-dependent DNA helicase pcrA n=81 Tax=cellula... 104 1e-20 UniRef50_C1A3F5 ATP-dependent DNA helicase UvrD1 n=31 Tax=Bacter... 104 1e-20 UniRef50_A5GA79 UvrD/REP helicase n=10 Tax=Desulfuromonadales Re... 104 1e-20 UniRef50_B0RZ36 ATP-dependent DNA helicase n=21 Tax=Bacteria Rep... 104 1e-20 UniRef50_Q2S575 ATP-dependent DNA helicase n=2 Tax=Rhodothermace... 103 2e-20 UniRef50_A2F783 UvrD/REP helicase family protein n=1 Tax=Trichom... 103 2e-20 UniRef50_C5NYN7 ATP-dependent helicase PcrA n=1 Tax=Gemella haem... 103 2e-20 UniRef50_B8FP41 ATP-dependent DNA helicase PcrA n=10 Tax=Firmicu... 103 2e-20 UniRef50_A5WC18 UvrD/REP helicase n=2 Tax=Psychrobacter RepID=A5... 103 2e-20 UniRef50_A6TQ92 UvrD/REP helicase n=2 Tax=Alkaliphilus RepID=A6T... 103 2e-20 UniRef50_B2UQR8 UvrD/REP helicase n=2 Tax=Verrucomicrobiaceae Re... 103 2e-20 UniRef50_A8SMG4 Putative uncharacterized protein n=1 Tax=Parvimo... 103 2e-20 UniRef50_C2UN36 ATP-dependent DNA helicase, UvrD/REP n=3 Tax=Bac... 103 2e-20 UniRef50_C6XGC2 DNA helicase II n=1 Tax=Candidatus Liberibacter ... 103 2e-20 UniRef50_B1C8W2 Putative uncharacterized protein n=1 Tax=Anaerof... 103 2e-20 UniRef50_C8WTI7 ATP-dependent DNA helicase PcrA n=2 Tax=Alicyclo... 103 2e-20 UniRef50_C4XGR7 ATP-dependent DNA helicase n=4 Tax=Desulfovibrio... 103 3e-20 UniRef50_C7NAU4 UvrD/REP helicase n=5 Tax=Fusobacteriaceae RepID... 103 3e-20 UniRef50_B8DM59 UvrD/REP helicase n=5 Tax=Bacteria RepID=B8DM59_... 103 3e-20 UniRef50_B1I553 ATP-dependent DNA helicase PcrA n=6 Tax=Bacteria... 103 3e-20 UniRef50_Q98PM4 ATP-DEPENDENT HELICASE PCRA n=1 Tax=Mycoplasma p... 103 3e-20 UniRef50_Q6MND7 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio ... 103 3e-20 UniRef50_Q5NVY5 ATP-dependent DNA helicase n=2 Tax=Archaea RepID... 102 3e-20 UniRef50_C8XDJ8 ATP-dependent DNA helicase PcrA n=2 Tax=Actinomy... 102 3e-20 UniRef50_D1B9M8 UvrD/REP helicase n=1 Tax=Thermanaerovibrio acid... 102 4e-20 UniRef50_P57654 ATP-dependent DNA helicase rep n=4 Tax=Buchnera ... 102 4e-20 UniRef50_UPI0001BC8A6C UvrD-like helicase IV n=1 Tax=Pseudomonas... 102 4e-20 UniRef50_C7M335 UvrD/REP helicase n=1 Tax=Acidimicrobium ferroox... 102 4e-20 UniRef50_A9WKU6 DNA helicase II n=2 Tax=Bacteria RepID=A9WKU6_RENSM 102 4e-20 UniRef50_C1XMD9 ATP-dependent DNA helicase, Rep family n=1 Tax=M... 102 4e-20 UniRef50_C3LBP3 ATP-dependent DNA helicase, UvrD/REP family n=82... 102 5e-20 UniRef50_D2R9Y0 Putative ATP-dependent DNA helicase PcrA n=1 Tax... 102 5e-20 UniRef50_D1PL59 ATP-dependent DNA helicase n=4 Tax=Ruminococcace... 102 5e-20 UniRef50_C4G2S8 Putative uncharacterized protein n=1 Tax=Abiotro... 102 6e-20 UniRef50_C6C0S1 UvrD/REP helicase n=3 Tax=Desulfovibrionales Rep... 102 6e-20 UniRef50_C3WAC5 DNA helicase II n=1 Tax=Fusobacterium mortiferum... 102 6e-20 UniRef50_A7VTM6 Putative uncharacterized protein n=1 Tax=Clostri... 102 7e-20 UniRef50_C0B1B2 Putative uncharacterized protein n=1 Tax=Proteus... 102 7e-20 UniRef50_C5VHV2 ATP-dependent DNA helicase PcrA n=20 Tax=Bactero... 102 7e-20 UniRef50_B0S125 DNA helicase II n=2 Tax=Finegoldia magna RepID=B... 101 8e-20 UniRef50_A5IY88 ATP dependent helicase n=2 Tax=Mycoplasma RepID=... 101 1e-19 UniRef50_B6FTD7 Putative uncharacterized protein (Fragment) n=1 ... 101 1e-19 UniRef50_Q0AHY9 ATP-dependent DNA helicase UvrD n=16 Tax=Betapro... 101 1e-19 UniRef50_B2GM51 ATP-dependent DNA helicase UvrD1 n=10 Tax=Actino... 100 1e-19 UniRef50_Q1IVP8 ATP-dependent DNA helicase, Rep family n=2 Tax=B... 100 1e-19 UniRef50_Q5KJH7 ATP-dependent DNA helicase pcra, putative n=2 Ta... 100 2e-19 UniRef50_A7Z3H2 YjcD n=3 Tax=Bacillus RepID=A7Z3H2_BACA2 100 2e-19 UniRef50_UPI00016C0C66 ATP-dependent DNA helicase PcrA n=1 Tax=E... 100 2e-19 UniRef50_B9X9R1 UvrD/REP helicase n=1 Tax=bacterium Ellin514 Rep... 100 2e-19 UniRef50_UPI0001C42BC3 ATP-dependent DNA helicase n=1 Tax=Bacill... 100 2e-19 UniRef50_A7AXS4 Putative uncharacterized protein n=1 Tax=Ruminoc... 100 2e-19 UniRef50_A0Q2Q4 ATP-dependent DNA helicase PcrA, putative n=23 T... 100 2e-19 UniRef50_Q2NK11 UvrD helicase n=2 Tax=Candidatus Phytoplasma ast... 100 2e-19 UniRef50_A5CU47 ATP-dependent DNA helicase n=4 Tax=Actinobacteri... 100 2e-19 UniRef50_Q31JE9 ATP-dependent DNA helicase UvrD n=3 Tax=Gammapro... 100 3e-19 UniRef50_B7GLR0 Putative uncharacterized protein n=1 Tax=Anoxyba... 100 3e-19 UniRef50_A1BEA2 ATP-dependent DNA helicase PcrA n=2 Tax=Chlorobi... 100 3e-19 UniRef50_P75437 Probable DNA helicase II homolog n=3 Tax=Mycopla... 100 3e-19 UniRef50_D1YX62 Putative ATP-dependent DNA helicase n=1 Tax=Meth... 100 3e-19 UniRef50_UPI0001BC375D ATP-dependent DNA helicase n=1 Tax=Butyri... 100 3e-19 UniRef50_Q2GE51 Helicase, UvrD/Rep family n=2 Tax=Neorickettsia ... 100 3e-19 UniRef50_Q6MI36 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio ... 100 3e-19 UniRef50_P03018 DNA helicase II n=409 Tax=cellular organisms Rep... 100 4e-19 UniRef50_D1CD72 UvrD/REP helicase n=1 Tax=Thermobaculum terrenum... 99 4e-19 UniRef50_B9AD93 Putative uncharacterized protein n=2 Tax=Methano... 99 4e-19 UniRef50_P44804 ATP-dependent DNA helicase rep n=275 Tax=Proteob... 99 4e-19 UniRef50_D2MPE9 Putative ATP-dependent helicase PcrA n=1 Tax=Bul... 99 5e-19 UniRef50_A3TGM1 Putative DNA helicase n=1 Tax=Janibacter sp. HTC... 99 5e-19 UniRef50_A5UJ85 DNA helicase II n=1 Tax=Methanobrevibacter smith... 99 5e-19 UniRef50_C0R0K3 ATP-dependent DNA helicase n=2 Tax=Brachyspira R... 99 6e-19 UniRef50_Q1J014 UvrD/REP helicase n=4 Tax=Deinococci RepID=Q1J01... 99 6e-19 UniRef50_Q67RU7 ATP-dependent DNA helicase n=1 Tax=Symbiobacteri... 99 6e-19 UniRef50_C6JLW6 UvrD/REP helicase n=2 Tax=Fusobacterium RepID=C6... 99 7e-19 UniRef50_Q0ACW3 UvrD/REP helicase n=9 Tax=Bacteria RepID=Q0ACW3_... 99 8e-19 UniRef50_B3EU74 UvrD/REP helicase n=4 Tax=Bacteroidetes RepID=B3... 99 8e-19 UniRef50_B6K032 ATP-dependent DNA helicase srs2 n=1 Tax=Schizosa... 99 8e-19 UniRef50_C3QGR5 ATP-dependent DNA helicase n=23 Tax=Bacteroidale... 98 8e-19 UniRef50_A0M3U3 PcrA-like UvrD/Rep family ATP-dependent DNA heli... 98 9e-19 UniRef50_Q9CD72 ATP-dependent DNA helicase pcrA n=26 Tax=Actinom... 98 1e-18 UniRef50_D1A297 ATP-dependent DNA helicase PcrA n=3 Tax=Actinomy... 98 1e-18 UniRef50_Q2RGX9 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria... 98 1e-18 UniRef50_C4G2E3 Putative uncharacterized protein n=1 Tax=Abiotro... 98 1e-18 UniRef50_Q5HY14 DNA helicase II UvrD n=2 Tax=Gluconobacter oxyda... 98 1e-18 UniRef50_C2CV85 Possible ATP-dependent DNA helicase n=2 Tax=Bifi... 98 1e-18 UniRef50_UPI00019730DB UvrD/REP helicase n=1 Tax=Clostridium sp.... 98 1e-18 UniRef50_Q029V8 ATP-dependent DNA helicase, Rep family n=1 Tax=C... 98 1e-18 UniRef50_C4DDU0 DNA/RNA helicase, superfamily I n=1 Tax=Stackebr... 98 1e-18 UniRef50_A9ETX5 ATP-depentend DNA helicase n=1 Tax=Sorangium cel... 97 1e-18 UniRef50_C8S459 UvrD/REP helicase n=1 Tax=Rhodobacter sp. SW2 Re... 97 1e-18 UniRef50_A8ZYJ7 UvrD/REP helicase n=1 Tax=Desulfococcus oleovora... 97 2e-18 UniRef50_Q2RLV0 UvrD/REP helicase n=2 Tax=cellular organisms Rep... 97 2e-18 UniRef50_D0JAI1 ATP-dependent DNA helicase n=2 Tax=Blattabacteri... 97 2e-18 UniRef50_C9LD15 ATP-dependent DNA helicase PcrA n=1 Tax=Prevotel... 97 2e-18 UniRef50_Q2SKI4 UvrD/REP helicase family protein n=1 Tax=Hahella... 97 2e-18 UniRef50_O31626 Putative ATP-dependent DNA helicase yjcD n=3 Tax... 97 2e-18 UniRef50_UPI00016C5306 ATP-dependent DNA helicase n=2 Tax=Gemmat... 97 2e-18 UniRef50_P45612 Probable DNA helicase II homolog n=4 Tax=Mollicu... 97 2e-18 UniRef50_B2S4R5 DNA helicase II n=3 Tax=Treponema RepID=B2S4R5_T... 97 2e-18 UniRef50_A5TXQ2 Superfamily I ATP-dependent helicase n=15 Tax=Fu... 97 3e-18 UniRef50_Q28NL8 ATP-dependent DNA helicase, Rep family n=11 Tax=... 97 3e-18 UniRef50_C8Q3Z5 UvrD/REP helicase n=2 Tax=Proteobacteria RepID=C... 97 3e-18 UniRef50_B5YD55 ATP-dependent DNA helicase n=2 Tax=Dictyoglomus ... 97 3e-18 UniRef50_Q04T79 ATP-dependent DNA helicase n=6 Tax=Leptospira Re... 97 3e-18 UniRef50_B2I385 Superfamily I DNA and RNA helicase n=17 Tax=Acin... 97 3e-18 UniRef50_B5K795 UvrD/REP helicase n=5 Tax=Rhodobacterales RepID=... 97 3e-18 UniRef50_C6NVE2 ATP-dependent DNA helicase Rep n=1 Tax=Acidithio... 97 3e-18 UniRef50_A7VD84 Putative uncharacterized protein n=2 Tax=Clostri... 96 3e-18 UniRef50_A1TNG2 ATP-dependent DNA helicase UvrD n=11 Tax=cellula... 96 3e-18 >UniRef50_P15038 Helicase IV n=169 Tax=cellular organisms RepID=HELD_ECOLI Length = 684 Score = 1406 bits (3639), Expect = 0.0, Method: Compositional matrix adjust. Identities = 684/684 (100%), Positives = 684/684 (100%) Query: 1 MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLAIHCKRGLVWGELEFV 60 MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLAIHCKRGLVWGELEFV Sbjct: 1 MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLAIHCKRGLVWGELEFV 60 Query: 61 LPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENKWL 120 LPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENKWL Sbjct: 61 LPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENKWL 120 Query: 121 TREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEA 180 TREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEA Sbjct: 121 TREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEA 180 Query: 181 MLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEAS 240 MLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEAS Sbjct: 181 MLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEAS 240 Query: 241 PEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDT 300 PEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDT Sbjct: 241 PEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDT 300 Query: 301 AARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWV 360 AARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWV Sbjct: 301 AARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWV 360 Query: 361 SLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIV 420 SLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIV Sbjct: 361 SLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIV 420 Query: 421 ILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQM 480 ILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQM Sbjct: 421 ILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQM 480 Query: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL 540 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL Sbjct: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL 540 Query: 541 LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQ 600 LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQ Sbjct: 541 LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQ 600 Query: 601 QADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWAL 660 QADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWAL Sbjct: 601 QADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWAL 660 Query: 661 FNKENPSPFVEILKNLDVPVARKP 684 FNKENPSPFVEILKNLDVPVARKP Sbjct: 661 FNKENPSPFVEILKNLDVPVARKP 684 >UniRef50_A9ZEX9 Helicase IV (75 kDa helicase) n=15 Tax=Enterobacteriaceae RepID=A9ZEX9_YERPE Length = 661 Score = 940 bits (2430), Expect = 0.0, Method: Compositional matrix adjust. Identities = 456/684 (66%), Positives = 543/684 (79%), Gaps = 23/684 (3%) Query: 1 MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLAIHCKRGLVWGELEFV 60 MELKAT+ GK L+QHPY+R +LNAGI+V GD+H+YLIPFNQL++I CKRG+VWGELEF Sbjct: 1 MELKATSFGKHLSQHPYNRVRLLNAGIEVCGDKHQYLIPFNQLVSIQCKRGIVWGELEFE 60 Query: 61 LPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENKWL 120 LP +KVVRLHGTEW ETQ FYH+L W++WS EMS++ + VL +Q++ I ++KW Sbjct: 61 LPQQKVVRLHGTEWQETQHFYHYLLGVWQQWSEEMSQVCAEVLHKQVESIKRIEQQDKWF 120 Query: 121 TREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEA 180 R + +Q IR+A SALP+PV RL F++CR + C WL+ + + NQ +T Sbjct: 121 KRSELGQIQVMIREAFSALPMPVERLAAFESCRADYECCLRWLQQGRHSVERCNQQWTAR 180 Query: 181 MLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEAS 240 ML EY DFF+ VE+SPLN +Q+RAVVNGE S+LVLAGAGSGKTSVLVARAGWLL R EA Sbjct: 181 MLEEYQDFFQNVETSPLNASQSRAVVNGEDSVLVLAGAGSGKTSVLVARAGWLLRRNEAL 240 Query: 241 PEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDT 300 PEQILLLAFGR+AA+EM+ RI++RL + I A+TFHALALHIIQQGS+K P++SKLE+D+ Sbjct: 241 PEQILLLAFGRQAADEMNSRIKQRLGVDSIQAKTFHALALHIIQQGSRKTPVISKLESDS 300 Query: 301 AARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWV 360 AR L I W++QCSEKKAQ D++L RLASRL+RWV Sbjct: 301 QARRALLIQHWQQQCSEKKAQ-----------------------DKRLAARLASRLERWV 337 Query: 361 SLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIV 420 LMRM+GG+QAEMI A +E+RDLF KRI+LMAPLLKAWK ALK E AVDFSGLIHQA+ Sbjct: 338 GLMRMYGGSQAEMIEQANDEVRDLFQKRIRLMAPLLKAWKTALKDEGAVDFSGLIHQAVN 397 Query: 421 ILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQM 480 +LEKGRF+SPWKH+LVDEFQDISPQRA LLAALRKQN QT LFAVGDDWQAIYRFSGA++ Sbjct: 398 LLEKGRFVSPWKHVLVDEFQDISPQRAMLLAALRKQNKQTCLFAVGDDWQAIYRFSGAEL 457 Query: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL 540 SLTTAF E+FGEG C LDTTYRFN RIG++ANRFIQQNP QLKKPLNSL+ G+KK+V + Sbjct: 458 SLTTAFSEHFGEGAECALDTTYRFNDRIGDIANRFIQQNPYQLKKPLNSLSKGNKKSVMI 517 Query: 541 LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQ 600 L + QL+ALLDKLSG+ K ERILILARYHH+RP L+KAATRWPKL IDFMTIHASKGQ Sbjct: 518 LPDEQLEALLDKLSGFVKDGERILILARYHHLRPEVLQKAATRWPKLTIDFMTIHASKGQ 577 Query: 601 QADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWAL 660 QADYVIIVGL EG+DGFPAAARES++E+ LLPP EDFPDAEERRL+YVA+TRA+H+VW L Sbjct: 578 QADYVIIVGLHEGNDGFPAAARESVLEDVLLPPPEDFPDAEERRLLYVAITRAKHQVWLL 637 Query: 661 FNKENPSPFVEILKNLDVPVARKP 684 + PS FV L L V RKP Sbjct: 638 QDTARPSIFVSQLSELGALVQRKP 661 >UniRef50_D0YXK5 DNA helicase IV n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0YXK5_LISDA Length = 701 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 262/701 (37%), Positives = 381/701 (54%), Gaps = 30/701 (4%) Query: 1 MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLL-AIHCKRGLVWGELEF 59 M+L A+ L + L Q Y + + + + I F+ +I RG++WG LE Sbjct: 7 MQLSASRLAQWLVQGDYYSIELQDNRLVLESQTETDEISFDDWDGSIDVHRGVMWGTLEL 66 Query: 60 VLPDEKVV-RLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENK 118 D+K +HG W E + F L ++ W+ L + L I TG+ Sbjct: 67 TSSDQKYCWTVHGLPWRECKPFAQDLVQTYQNWAHARVAKLDAALPEMLKRIHAFTGQKG 126 Query: 119 WLTREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYT 178 +L + + Q + +L L F +A+ WL D + +HN+ + Sbjct: 127 YLRDSEHDDLYQLLTSSLEHSELTPELAASFRP--KAFEHILPWLGDNDVWVDEHNKKWI 184 Query: 179 EAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGE 238 E ++ +F ESSPLNP+Q AV+ + LVLAGAGSGKTSVLVARAG+L+A + Sbjct: 185 EKESNKWGSWFDSFESSPLNPSQREAVLINQDHNLVLAGAGSGKTSVLVARAGYLIASQK 244 Query: 239 ASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLEN 298 A PE+IL+LAFGR A+EEM+ R+R ++ ++ + TFH+L II+Q + P VS + Sbjct: 245 ALPEEILMLAFGRMASEEMNARMRTKV-SDRVKVATFHSLGTEIIRQVEHERPNVSPIAL 303 Query: 299 DTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVP---EGNFWDDEKLQRRLASR 355 D AR +IA + K A AK W++ LT QW +P + N + + + + Sbjct: 304 DDKAR-SAWIARMLMEQWNKPASAKRWQRHLT---QWRIPGFSKENSMEQQAENEQTINW 359 Query: 356 LDRWVSLMRMHGGAQAEMIA----SAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDF 411 + R + L+ G + +++ S+ +R ++L+ P +A++ LK + +DF Sbjct: 360 IWRHIELLGQRGATKEQLLNDIQDSSNPAMRPRMKSELELLWPCYEAYQQHLKVKKQIDF 419 Query: 412 SGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAAL-----RKQNSQTTLFAVG 466 + +I A +++G+FISPW+ ++VDE+QDISP R +L+ AL + TLFAVG Sbjct: 420 NSMIKVATQYVKEGKFISPWRFVMVDEYQDISPLRLSLIEALCQPQPNSDKAAPTLFAVG 479 Query: 467 DDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKP 526 DDWQAIYRF+G+ ++LTT F E FG L TTYRFN+ IG+VAN F+QQNP Q+KK Sbjct: 480 DDWQAIYRFAGSDVNLTTDFEERFGATHITQLSTTYRFNNMIGDVANVFVQQNPMQVKKE 539 Query: 527 LNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEE----RILILARYHHMRPASLEKAAT 582 L S KKAVTLL + D +L +L AK E +LIL R + RPA LE Sbjct: 540 LTSFKKQKKKAVTLLAQ---DFILQELGQLAKRYEGKQTNVLILGRNNKQRPAKLEAWQE 596 Query: 583 RWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEE 642 +WP+L + +MT HASKGQ+A YV IV + +G FP RE+ + L E + DAEE Sbjct: 597 QWPQLNLQYMTCHASKGQEAQYVFIVDVNKGI--FPTLDRETGLASILQSRAETYADAEE 654 Query: 643 RRLMYVALTRARHRVWALFNKENPSPFVEILKNLDVPVARK 683 RRL YVALTRA+ V+ N N SPF+ L PV K Sbjct: 655 RRLFYVALTRAKKHVYVCANPMNVSPFINELIEDKYPVDNK 695 >UniRef50_A5EZU3 Helicase IV n=56 Tax=Vibrionales RepID=A5EZU3_VIBC3 Length = 699 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 268/706 (37%), Positives = 380/706 (53%), Gaps = 43/706 (6%) Query: 1 MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLA-IHCKRGLVWGELEF 59 M+L A + + Y + + + ++ E IPF+ + +RG+ WG L+F Sbjct: 13 MQLNANKTAQFFIANEYYQVQLEKEWLVLTSLSSEERIPFHVWNGEVQIRRGVFWGTLQF 72 Query: 60 VL-PDEKVVR---LHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTG 115 P+E V R + G W E + F H L AH++ W E QL L R Sbjct: 73 FAHPEEGVQRSWLVQGLPWPECRHFAHQLVAHYQAWHNRQCE--------QLSLYFPRWQ 124 Query: 116 ENKWLTREQT-------SGVQQQIRQALSALPLPVNRLEEFD-NCREAWRKCQAWLKDIE 167 + L+R + S V+ + Q + L L L E + + WL D Sbjct: 125 QE--LSRLKRLPSFLSHSSVEAWVAQVYADLKLMDMTLHEAQKHLPTVFDTLLPWLLDTS 182 Query: 168 SARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLV 227 + + N+A+ E + F Q ESSPLN +Q AV+ + LVLAGAGSGKTSVL Sbjct: 183 ATLYERNKAWLEIERANWTVLFSQCESSPLNVSQQYAVLLNDDHNLVLAGAGSGKTSVLT 242 Query: 228 ARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRER--LHTEDITARTFHALALHIIQQ 285 AR +LL A PEQILL+AF R AA+EM ER++ + L E + TFH L L II + Sbjct: 243 ARVSYLLQSHLAKPEQILLVAFARDAAQEMAERLKNKIGLEAERLHINTFHQLGLRIINR 302 Query: 286 GSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPE------ 339 K I+S L ND+ + I +W K+ K W++ L +W + Sbjct: 303 VEGKTVIMSPLANDSKLKQAWCI-DWLKRHWMTPTNFKRWQKHLA---KWPIAYLAGDDE 358 Query: 340 -GNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKA 398 G+ ++ KL L +LD+ ++ M + E + + R + + L P +A Sbjct: 359 LGSHVENPKLIAWLEKQLDQ-LAQMGLSKKELQERLVDHDDYPR--LNSELSLCWPCYQA 415 Query: 399 WKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQN- 457 W+ LK +N +DF+ +I +A +EKG+F SPWK I+VDE+QDISPQR LL AL +QN Sbjct: 416 WQQMLKDQNQIDFNIMITRATEYVEKGKFRSPWKFIMVDEYQDISPQRLRLLQALCEQNQ 475 Query: 458 SQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQ 517 Q LFAVGDDWQ+IY+F+G+ + LTT F F LDTTYRFN +IG VANRFIQ Sbjct: 476 GQCNLFAVGDDWQSIYQFAGSDVDLTTGFASRFAHSTVHHLDTTYRFNDQIGAVANRFIQ 535 Query: 518 QNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASL 577 QNP QL K LNS +KAV L ++ +LD+++ + +L+L R H+ +P L Sbjct: 536 QNPHQLPKTLNSFKTQKQKAVMLAPNHSVEKILDEINRSTNKLKTVLLLGRNHYHKPELL 595 Query: 578 EKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDF 637 + R+ L++DFMT HASKG++ADYVII+ + EG FPA + +++AL +DF Sbjct: 596 KDWQNRYLSLKLDFMTCHASKGKEADYVIILAVDEGQ--FPARVKALHLDDALNQSEDDF 653 Query: 638 PDAEERRLMYVALTRARHRVWALFNKENPSPFVEILKNLDVPVARK 683 P AEERRL YVALTRA+ +VW +N N S FV+ L N D PV ++ Sbjct: 654 PYAEERRLFYVALTRAKEKVWVTYNG-NGSSFVQELLNDDYPVVKQ 698 >UniRef50_Q6LST7 Hypothetical helicase IV n=5 Tax=Gammaproteobacteria RepID=Q6LST7_PHOPR Length = 694 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 255/696 (36%), Positives = 380/696 (54%), Gaps = 22/696 (3%) Query: 1 MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLL-AIHCKRGLVWGELEF 59 M L A+ L + Q Y + + + I F+ AI RG+VWG LE Sbjct: 1 MRLSASVLAQWFVQGDYFSIELNEHSLTLDSQTETSTISFDDWDGAIEVHRGVVWGSLEL 60 Query: 60 VLPDEKVV-RLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENK 118 D++ +HG W + + F L +R W+ + L L+ I + + Sbjct: 61 TSADQQYCWTIHGLPWQQCKPFAARLLESYRDWAHGRVDRLDKALPDVLNRINSFATQQG 120 Query: 119 WLTREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYT 178 +L + + + + +L L F A+ + + WL+ ++N+ + Sbjct: 121 YLRESEHDNLCKFLDDSLKTTGLTPELAASFRPM--AFERIEPWLEGNGDWVEENNREWL 178 Query: 179 EAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGE 238 + +++ +F + E+SPLN +Q AV+ + LVLAGAG+GKTSVLVARAG+L+A Sbjct: 179 TSEAEKWSSWFDKFETSPLNSSQREAVLINQDHNLVLAGAGTGKTSVLVARAGYLVANQA 238 Query: 239 ASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLEN 298 A PE+IL+LAFGR AAEEM ER+ +++ I TFHAL IIQ + P VS L Sbjct: 239 AQPEEILMLAFGRNAAEEMRERLALKVNNR-IKVATFHALGTQIIQSVENERPNVSPLAL 297 Query: 299 DTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVP---EGNFWDDEKLQRRLASR 355 D A+ + + ++Q E A AK W++ LT QW +P N + + +LAS Sbjct: 298 DDKAKAQWITSTLKEQW-ESAASAKRWQKHLT---QWRIPGFKADNSMEQQAKNEQLASW 353 Query: 356 LDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIK----LMAPLLKAWKGALKAENAVDF 411 + R + L+ G ++++++A + +R+K L+ P +A++ LK+ +DF Sbjct: 354 VWRHIELIGQSGLSKSDLVAIIDKSNNPATKQRMKSELGLLWPCFRAYEQHLKSNKQIDF 413 Query: 412 SGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQT----TLFAVGD 467 + +I +A+ + G+F+ W+ I+VDE+QDISPQR +L+ AL + +T TLFAVGD Sbjct: 414 NTMIQKAVEYVNDGKFVPEWRFIMVDEYQDISPQRLSLIEALCRSEEETKPRPTLFAVGD 473 Query: 468 DWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 DWQAIYRF+GA ++LTT F + FG +LDTTYRFNS IGEVAN FIQQNP QL+K L Sbjct: 474 DWQAIYRFAGADVNLTTGFADRFGSSHITELDTTYRFNSMIGEVANTFIQQNPQQLRKDL 533 Query: 528 NSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKL 587 S +KAVTLL + L+ L +L+ + +L+L R + RP L+ T+WP+L Sbjct: 534 TSHKKQKRKAVTLLCQDLLEQELVQLASQNEKPVTVLLLGRNNKQRPEKLKAWQTQWPQL 593 Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 + FMT H SKG++AD+V I+ + G FPA RE+ + L E + DAEERRL Y Sbjct: 594 NMTFMTCHGSKGREADFVFILDVNRGV--FPAPERETGLAACLQSKNEGYADAEERRLFY 651 Query: 648 VALTRARHRVWALFNKENPSPFVEILKNLDVPVARK 683 VALTRA+ VW + E S FV L + V K Sbjct: 652 VALTRAKKHVWVCADPEKTSSFVNELIDDKYAVMNK 687 >UniRef50_Q5E4C9 DNA helicase IV n=3 Tax=Aliivibrio RepID=Q5E4C9_VIBF1 Length = 687 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 246/697 (35%), Positives = 382/697 (54%), Gaps = 30/697 (4%) Query: 1 MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLA-IHCKRGLVWGELEF 59 M++KAT + L Q + + + + + +++ +PF++ + +RGL+WG L F Sbjct: 1 MQIKATPFAQWLVQGDFYQLELEQEQLLFTSHKYQVSVPFDKWSGKVTFERGLIWGALCF 60 Query: 60 VLPDEKVV-RLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENK 118 +E+V R+ G W E + + + W + + + Q ++LI + + Sbjct: 61 YNRNEQVAWRVSGLPWEECDAIINAVLNAYADWKESKVLLLNQLQPQMIELIENFSANKR 120 Query: 119 WLTREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQA----WLKDIESARLQHN 174 +L + + + +++ + + E+ C A WL + E N Sbjct: 121 FLKQTEALMMVEKLYDLFEQTKISIPLAEQLQ------PDCIAPVIDWLTEPEEQLKVLN 174 Query: 175 QAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLL 234 + E E+ FF + ES PLN +Q A++ E LVLAGAGSGKTSVLVAR +L+ Sbjct: 175 DNWLEEQKVEWKTFFSECESQPLNESQQSALLLNEDHTLVLAGAGSGKTSVLVARVNYLI 234 Query: 235 ARGEASPEQILLLAFGRKAAEEMDERIRERLHTE---DITARTFHALALHIIQQGSKKVP 291 G+A ++ILLLAFGR+AA+EM RI ++L E + TFH L L II+ + P Sbjct: 235 QSGQAQADEILLLAFGRQAAQEMSGRIIDKLGFEIGQRVKVATFHQLGLDIIRHVEYQQP 294 Query: 292 IVSKLENDTAARHELFI----AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEK 347 +S L D AR E F+ +EW+ + + + K ++W ++ V +EK Sbjct: 295 KLSCLVTDVKARKEWFVHVLDSEWKNATAMNRWK-KHLKKWPIAYLRGDVDLREESHNEK 353 Query: 348 LQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAEN 407 LQ L ++ + SL ++ + E I P+ R + ++ P KA++ LK E+ Sbjct: 354 LQEWLYKQICQLNSL-QLDKKSIVEKIEFHPDVQR--LKSELNIVWPFFKAYERTLKHED 410 Query: 408 AVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAAL----RKQNSQTTLF 463 A+D+ +I +A + ++ PW ++VDE+QDISPQR L+ A+ K ++ TLF Sbjct: 411 AIDYESMITKAKAYIADNKYELPWSFVMVDEYQDISPQRLDLIEAICHTENKHQTKATLF 470 Query: 464 AVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQL 523 AVGDDWQAIYRF+GA +SLTT F F + L TTYRFN +IG VANRF+Q+NP QL Sbjct: 471 AVGDDWQAIYRFAGADVSLTTGFEHRFQSTQIAHLSTTYRFNDQIGAVANRFVQENPMQL 530 Query: 524 KKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATR 583 KK LNS T +KAV +++ ++ L LS + E+++IL R H+ +P S ++ Sbjct: 531 KKELNSFTKKKRKAVKVIEHQSIEKELLSLSKNIRDGEKVVILGRNHNHKPDSFDEWVKF 590 Query: 584 WPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEER 643 +P L +++ T HASKG +ADYV IV + +G FP R ++ ALLP E FP AEER Sbjct: 591 YPGLNLEYNTCHASKGTEADYVFIVEMTDGQ--FPMKERAESLDTALLPHAESFPYAEER 648 Query: 644 RLMYVALTRARHRVWALFNKENPSPFVEILKNLDVPV 680 RL YVALTRA+ +VW +++ + PSPFV+ + + D PV Sbjct: 649 RLFYVALTRAKKKVWIVYHGK-PSPFVQEIVDKDYPV 684 >UniRef50_D0IB53 DNA helicase IV n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0IB53_VIBHO Length = 694 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 260/704 (36%), Positives = 383/704 (54%), Gaps = 40/704 (5%) Query: 1 MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLAIHCK--RGLVWGELE 58 M+L A+ L + Q + V+ + +PF+ + C+ RGLVWG L Sbjct: 1 MKLSASNLAQWFVQGAHYSIVLDEEQLVFESKHMTETVPFS-IWDGQCRVSRGLVWGRLT 59 Query: 59 FVL-PDEKVVR---LHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRT 114 FV+ P ++ R ++G W + + + ++ W G+ S + + +L+A R Sbjct: 60 FVVSPADQPARTLTVYGLPWRKVHAYAGKVTEQYQCWLGKQQ---SKFMLVEHELVALRD 116 Query: 115 ---GENKWLTREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARL 171 +L E QQ+ R+ + + + ++ WL++ E+ R Sbjct: 117 VLRDHRGYLRVEDLKAWQQKAREVFERCNIHPQVMATANPS--LYQALYGWLQNGEAQRA 174 Query: 172 QHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAG 231 N + + L ++ +F VE+SPLN +Q +AV+ ++ L+LAGAGSGKTSVL+ARA Sbjct: 175 ARNAQWCDGELERWSGWFDGVEASPLNASQRQAVLMDDNHNLLLAGAGSGKTSVLMARAQ 234 Query: 232 WLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVP 291 +L+A + P +IL+LAFG+KA+EEM R+ E+ + TFHA AL +I++ S + Sbjct: 235 YLVASQQTEPSRILMLAFGKKASEEMAGRL-EKAGLHGVETSTFHAFALKVIREISGQEA 293 Query: 292 IVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVP----EGNFWD--- 344 V+ L D A+H ++ W +E AQ ++WL QWSVP E + Sbjct: 294 KVAPLATDEEAKHS-WLTLW---LAENLAQPAVEKRWLKHLEQWSVPGLTRERPLVEQAH 349 Query: 345 DEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALK 404 D KLQ L LD V + +A + E+ F+ L+ P+LK + ALK Sbjct: 350 DGKLQTWLWRHLDLLVQQSQPATAIRA--VIKGDEKAESEFA----LVQPVLKGYLNALK 403 Query: 405 AENAVDFSGLIHQAIVILEKGR--FISPWKHILVDEFQDISPQRAALLAAL--RKQNSQT 460 + A DF+GLI +A +L K F + + HI+VDE+QDISP R ALL AL K+N Sbjct: 404 EQKAQDFNGLIREATKLLSKKSETFGARYDHIMVDEYQDISPARLALLEALCGGKRNRAP 463 Query: 461 TLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNP 520 +LFAVGDDWQAIYRF+G+ +SLTT F F G LDTTYRFNS+IGEVANRFIQ +P Sbjct: 464 SLFAVGDDWQAIYRFAGSDVSLTTGFMNRFPAGVIRYLDTTYRFNSQIGEVANRFIQVDP 523 Query: 521 GQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPE-ERILILARYHHMRPASLEK 579 QL KPLNS KKAV L+ +D++L+KL+ A + +L++ R + RP+ LE+ Sbjct: 524 QQLNKPLNSQRIQKKKAVHLMPSEAIDSVLEKLAKSAGDKGASVLLIGRNNANRPSRLEE 583 Query: 580 AATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPD 639 +P L + ++T HASKG +AD+ +++ + EG FPA + +E ALL + Sbjct: 584 WQQGYPSLSVTYVTAHASKGLEADFTLLLDVNEGV--FPARSATEGLEAALLKVDGEMEH 641 Query: 640 AEERRLMYVALTRARHRVWALFNKENPSPFVEILKNLDVPVARK 683 AEERRL YVALTRA+H W + E PS FV+ L PV K Sbjct: 642 AEERRLFYVALTRAKHECWIFADPEKPSVFVKELWQGSYPVTSK 685 >UniRef50_A4CC59 DNA helicase IV n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CC59_9GAMM Length = 707 Score = 358 bits (920), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 210/519 (40%), Positives = 290/519 (55%), Gaps = 22/519 (4%) Query: 177 YTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLAR 236 + + LT Y FF + S P+ P Q +A V + + LVLAGAGSGKTSV+V R G+LL Sbjct: 175 FVQNELTRYKLFFDKQNSHPMTPKQRQACVINDDNNLVLAGAGSGKTSVMVGRVGYLLQS 234 Query: 237 GEASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKL 296 G A P QIL+LA+G+ AA+EMD R++ L DI TFH+LAL II Q +P +S Sbjct: 235 GLAKPSQILMLAYGKDAAQEMDLRLKNSLQRHDIKCATFHSLALSIINQVQGVMPNISVF 294 Query: 297 ENDTAARH----ELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRL 352 D A R E F +Q S KK Q + E + S D Sbjct: 295 ATDAATRKSWLTEQFHYLINRQLSYKK-QVIDLLNQVNMEAKKSFSHKTTIDQLLSHSDF 353 Query: 353 ASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSK-----RIKLMAPLLKAWKGALKAEN 407 + + L + A A ++ P+ D ++ L+ PL+ A++ L + Sbjct: 354 VNLQTHVLGLFDLIRSA-ASALSGVPQYFDDKCTQATLEHYFMLVKPLIDAYQSKLHQQQ 412 Query: 408 AVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGD 467 AVDF +I QA ++ G+F +PW HILVDEFQDIS RA LL ALR + LFAVGD Sbjct: 413 AVDFDDMIFQAHNMIHTGKFKAPWLHILVDEFQDISEPRAQLLKALRDNTHGSVLFAVGD 472 Query: 468 DWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 DWQ+IYRFSG+ T F FG +LD T+RFN++I EVANRF+ QNP Q+KK L Sbjct: 473 DWQSIYRFSGSNHHFITQFQRYFGASCTVNLDQTFRFNNKIAEVANRFVMQNPAQMKKEL 532 Query: 528 NSLTNGDKKAVTLLDE-------SQLDALLDKLSGYAKPEE-RILILARYHHMRP--ASL 577 NS +VT++ + + + A++D LS K ++ + ILAR+ + P A + Sbjct: 533 NSKVIQSHSSVTIITDFNTEKQNANVQAIIDALSFIDKTQKASVYILARFSFLLPNAAQM 592 Query: 578 EKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDF 637 R+ L I+ T+H+SKG++ADYVI+VGL EG GFPA +++ +A LPP +D+ Sbjct: 593 GLLTQRFKHLIIESYTVHSSKGKEADYVILVGLSEGKYGFPAKQNHNLIFDAFLPPQDDY 652 Query: 638 PDAEERRLMYVALTRARHRVWALFNKENPSPFV-EILKN 675 AEERRL YVALTRA+ V+ + S FV E++ N Sbjct: 653 LFAEERRLFYVALTRAKKHVYLIIPSSGISEFVLELINN 691 >UniRef50_C4LER9 UvrD/REP helicase n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LER9_TOLAT Length = 698 Score = 342 bits (876), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 234/698 (33%), Positives = 361/698 (51%), Gaps = 30/698 (4%) Query: 2 ELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLAI-HCKRGLVWGELEFV 60 E+K L L +HP + + G+++S + + ++PF+++ ++ KR L W L V Sbjct: 5 EIKNNWLTNLLFRHPASVLTLQSKGLQISDGKKKMVLPFSRMSSLPKIKRRLFWSHLS-V 63 Query: 61 LPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENKWL 120 +K G + ++F L+ + + + +Q I T + + Sbjct: 64 TTAKKSYLYKGFSASQLRQFSELLNDSLKLHVQQQLQAEYQEAKQLKTEIQTFLDASSFR 123 Query: 121 TREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEA 180 Q + ++ R+ L + + + A + ++ E + N + + Sbjct: 124 RSSQCRHLVERCRRLLKNTSVYLRECFATSSQLAALKYSADFVSFAEEKVKRANTKFLKQ 183 Query: 181 MLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEAS 240 L FF +E + L AQ +A + E LVLAGAG+GKTS ++ RAG+LL +A Sbjct: 184 ELLRCQSFFDHIEKNTLTLAQRKACIINEDHNLVLAGAGTGKTSTMIGRAGYLLVTAQAQ 243 Query: 241 PEQILLLAFGRKAAEEMDER----IRERLHTEDITARTFHALALHIIQQGSKKVPIVSKL 296 PE+IL+LAF +KAA EM ER +R L +TFHAL L II + K P+++ Sbjct: 244 PEKILMLAFAKKAAGEMQERQDKCLRPLLKNATPVIKTFHALGLEIIGKVEGKWPVITPF 303 Query: 297 ENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRL 356 + AA + FI + Q +A K Q+ T+ + +F L + Sbjct: 304 VENNAAFMQ-FIGDVIGQLMMNEAYKKKVSQFCTDRA-YPKSAADF-------SLLIADF 354 Query: 357 DRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIH 416 + A A I +R FS + L P+L A++ L N +DF+ +I Sbjct: 355 LLLFKQSHLTFPAFATDIKKQRSSVR--FSLFLSLFQPVLAAYEQHLTERNEIDFADMIG 412 Query: 417 QAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFS 476 +AI +E GR+ SP++HILVDEFQDIS +RA LL AL Q T LFAVGDDWQ+IYRF+ Sbjct: 413 KAIEYVESGRYCSPYQHILVDEFQDISQERARLLKALLAQRDDTVLFAVGDDWQSIYRFT 472 Query: 477 GAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKK 536 G+ +++T F FG LDTT+RFN++IGEVA+ F+ +NP Q+ K +NS + Sbjct: 473 GSDINITRQFESIFGATATTALDTTFRFNNKIGEVASGFVLKNPEQINKTINSASIVAHP 532 Query: 537 AVTL----LDESQLDALLDKLSG----YAKPEERILILARYHHM----RPASLEKAAT-R 583 AV+L + E L +L L+ Y++ + + +LAR++ + P L++ + Sbjct: 533 AVSLVQASVSERGLHQVLHHLNQDVPVYSEQKTSVAVLARFNFLLGDDSPVILKRQMEFQ 592 Query: 584 WPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEER 643 +P L I+FM++HASKG++ADYVI +G+ G GFP+ + E LLP E F AEER Sbjct: 593 YPYLDIEFMSVHASKGKEADYVIALGMNNGKYGFPSLKETDPILEFLLPEKETFSYAEER 652 Query: 644 RLMYVALTRARHRVWALFNKENPSPFVEILKNLDVPVA 681 RL YVALTRARHRV+ +++ PSPF+ L N PV Sbjct: 653 RLFYVALTRARHRVYLVYHPAEPSPFISELINQKYPVC 690 >UniRef50_A6FAM2 Hypothetical helicase IV n=1 Tax=Moritella sp. PE36 RepID=A6FAM2_9GAMM Length = 730 Score = 316 bits (809), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 226/666 (33%), Positives = 336/666 (50%), Gaps = 78/666 (11%) Query: 67 VRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATR--TGENKWLTREQ 124 VRL+G E D ++ +G+ ++I L QQL + R +KW+ + Sbjct: 73 VRLNGIAKAEVAGLID--DLYFYALTGKEADILE--LYQQLTQVIERGYIPYSKWIFLQT 128 Query: 125 TSG-------VQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAY 177 + +I + +AL LP+ RL W++ Q D ++NQA Sbjct: 129 QLAPWADWLEILPKINKVPAALKLPLARLR-------FWQQSQVENLD------KYNQAV 175 Query: 178 TEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARG 237 Y F +E PL Q A + + LVLAGAG GKTSV++ R +LL Sbjct: 176 MNKHKERYKSLFDGLERHPLTEQQRDACIVANDANLVLAGAGCGKTSVMLGRCAYLLESQ 235 Query: 238 EASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLE 297 +A+ + IL+LAF + AA+EM R+ ERL IT +TFHALAL II+Q + P VSKL Sbjct: 236 QATADSILILAFAKDAAQEMKTRLAERLPNAKITVKTFHALALDIIKQVDNERPKVSKLA 295 Query: 298 NDTAARHELF--IAEWR--------KQCSEKKAQAKGWRQWLTEEMQWSVP-EGNFWDDE 346 + +A+ + F I R K+ +K+ + +E V G DD+ Sbjct: 296 SSDSAKQQFFKQIISTRLLDKKLLEKELLDKELLDTNFNNLFSEYCYAYVAWLGKLPDDK 355 Query: 347 ---KLQRRLASR------LDRWVSLMRMHGGA----QAEMIASAPEEIRDLFSKRIKLMA 393 +++R LA + L + V L ++ + + + P+ D + +++ Sbjct: 356 HDAEVKRLLAGKGGYKKLLGQLVELTMLYKNTLTVKSEQKLNALPDT--DFAALTHEIVE 413 Query: 394 PLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAAL 453 LL ++ L N +DF +I +A + G+F SPW HILVDEFQDIS RA L+ L Sbjct: 414 ILLTHYQHELDESNEIDFDEMIIKASDYVRNGQFSSPWLHILVDEFQDISQARATLVRHL 473 Query: 454 RKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVAN 513 + Q+ + LF VGDDWQAIY+F+G+ +++TT F + FG L+TT+RFN +I VA+ Sbjct: 474 QTQHDDSKLFCVGDDWQAIYQFAGSDIAVTTRFSDYFGITSTLPLNTTFRFNDQISAVAS 533 Query: 514 RFIQQNPGQLKKPLNSLTNGDK---------------------KAVTLLDESQLDALLDK 552 +F+ N Q+ K + + T K A TLL E +L L Sbjct: 534 KFVMANSEQMHKQITTHTKAKKACIQVSYYQLGNDHKSSNKQDDAATLLLEKKLTQLAAA 593 Query: 553 LSGYAKPE---ERILILARYHHMRPAS--LEKAATRWPKLQIDFMTIHASKGQQADYVII 607 G +K E + +L+LAR++ P S L +T++P+L I MT+H+SKGQ+AD VI+ Sbjct: 594 NKGVSKGEGQQKSVLLLARFNFQLPDSKTLTALSTQYPQLDIKSMTVHSSKGQEADNVIV 653 Query: 608 VGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPS 667 + ++ G GFP R L P PDAEERRL YVALTRAR +V+ L NK+ PS Sbjct: 654 LAMEAGEHGFPCHKRRHPFSLILQPEPTGVPDAEERRLFYVALTRARQQVYLLCNKDKPS 713 Query: 668 PFVEIL 673 F+E L Sbjct: 714 AFIEEL 719 >UniRef50_Q3IIK2 Putative helicase IV n=1 Tax=Pseudoalteromonas haloplanktis TAC125 RepID=Q3IIK2_PSEHT Length = 731 Score = 288 bits (738), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 189/554 (34%), Positives = 289/554 (52%), Gaps = 55/554 (9%) Query: 177 YTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLAR 236 Y L + ADF+ VES+PL Q AV+ LVLA AG+GKTSV+VA+ L+A Sbjct: 174 YERKQLAQRADFYNNVESNPLTNEQRLAVIRNNDKNLVLAAAGTGKTSVMVAKTLDLIAT 233 Query: 237 GEASPEQILLLAFGRKAAEEMDERIRERLHTEDITAR-----TFHALALHIIQQGSKKV- 290 +A PEQIL+LA+ + AA+E+ R +R ++++ TFHAL L ++QQ K Sbjct: 234 KQAMPEQILVLAYNKTAAQELKTRFIKRAQQAKLSSKSPEVLTFHALGLQLLQQAGKGCN 293 Query: 291 --PIVSK-----------LENDTAARHEL---FIAEWRK---QCSEKKAQAKGWR--QWL 329 P VS L A+ L FIA K C K++ + L Sbjct: 294 ISPFVSDFGALSSWLTSWLSEQVQAQPVLLSAFIAMLDKPLVSCDTHKSKFNATQVLAIL 353 Query: 330 TEEMQWSVPEGNFW-----------DDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAP 378 + Q + D ++ +RL R + ++ +++ ++ Sbjct: 354 KDSGQLKHEVDKYLKCLAAIRAEQLTDSEITQRL-KRQNNQLNTVQLSTNQLNTSQVNSN 412 Query: 379 EEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDE 438 ++ + S +L+ + +A+K L A+N +DF +I QA + K + PW+HILVDE Sbjct: 413 QKSTNHHSAAAQLLIAMHRAYKTQLIAQNCIDFDDMILQATQAVNKQQVNVPWQHILVDE 472 Query: 439 FQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDL 498 FQDIS R ALL +L K + AVGDDWQ+IYRFSG ++LTT F+E G L Sbjct: 473 FQDISAARMALLNSLIKHGHKVRFTAVGDDWQSIYRFSGGNLALTTRFNELVGSHSLTLL 532 Query: 499 DTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAK 558 T+R+N+ I +VA RF+ QNP Q KK + + T + V LLD D K S K Sbjct: 533 QKTFRYNNSISDVAGRFVMQNPEQYKKLIITHTQVAEPQVILLD----DVYQGKKSLELK 588 Query: 559 PEE------------RILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVI 606 ++ I +L+RY + + A++ + F+T+H++KG +ADY I Sbjct: 589 TQQTINTIQKHHANASIAVLSRYRYTLNKVQQHLASQQKSANVAFLTLHSAKGLEADYCI 648 Query: 607 IVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENP 666 I+GL++G GFP++ + + + EALLP + F +EERRL+YV LTRA+H+ + + + + P Sbjct: 649 IIGLEQGKFGFPSSQQNNPLLEALLPSQDTFAYSEERRLLYVGLTRAKHKAYLIADAKQP 708 Query: 667 SPFVEILKNLDVPV 680 S FV+ L N + P+ Sbjct: 709 SLFVKELINDNYPI 722 >UniRef50_Q2BNY9 Helicase IV n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNY9_9GAMM Length = 952 Score = 258 bits (659), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 128/297 (43%), Positives = 193/297 (64%), Gaps = 11/297 (3%) Query: 390 KLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAAL 449 +L+ P+++ ++ L +DF +IH+AI +E GRF S WK ILVDEFQDIS RA L Sbjct: 530 ELLEPIIRRYEDHLAGNREIDFEDMIHKAISYVEDGRFKSHWKFILVDEFQDISFPRAEL 589 Query: 450 LAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIG 509 + LR T++F VGDDWQAIYRF+G+ + LTT F + FG + LD T+RFN++IG Sbjct: 590 VKKLRDSRKNTSIFCVGDDWQAIYRFTGSDVGLTTGFDQMFGATKTISLDKTFRFNNKIG 649 Query: 510 EVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLD--------ALLDKLSGYAKPEE 561 +VA+RF+ +NP Q+KK ++S + D+ +V+L+ ++ + ++L ++S AKP Sbjct: 650 DVASRFVMKNPSQVKKEMHSHLHVDQPSVSLIRKNIISDDYYGHVVSVLTRISETAKPGA 709 Query: 562 RILILARYHH--MRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPA 619 + +LARYH + L + +P L+I ++ HASKG++AD+VIIVGL G GFP+ Sbjct: 710 TVYVLARYHFKLFESSQLRHIRSMFPNLEISQLSFHASKGKEADFVIIVGLDNGKHGFPS 769 Query: 620 AARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFV-EILKN 675 + E LLP E++P+AEERRL YVA+TRA+HR + + + S FV E++K+ Sbjct: 770 KKLTHPLIEELLPKAEEYPEAEERRLFYVAITRAKHRCYLIADMTKASSFVKELVKD 826 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 52/123 (42%), Positives = 73/123 (59%) Query: 177 YTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLAR 236 Y E L E+ F ++ES+PL Q A + E + LVLAGAG+GKTS ++ + +L+ Sbjct: 170 YIEQQLAEHGTLFDKIESNPLTDKQRLACITDEDNNLVLAGAGTGKTSTMIGKTAYLIES 229 Query: 237 GEASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKL 296 +A +ILLLA+G KAA EM ERI+E+L ++ A TFH L II + P +S L Sbjct: 230 KQAVGHEILLLAYGNKAAAEMRERIQEKLGVSNVAAYTFHVLGQKIISDVEGEKPSISPL 289 Query: 297 END 299 D Sbjct: 290 ATD 292 >UniRef50_Q481U8 Helicase IV n=1 Tax=Colwellia psychrerythraea 34H RepID=Q481U8_COLP3 Length = 1042 Score = 258 bits (658), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 134/309 (43%), Positives = 194/309 (62%), Gaps = 20/309 (6%) Query: 387 KRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQR 446 K + L+ P+L A++ L + +DF +I++A+ ++ G+F SPW++I+VDEFQDIS R Sbjct: 599 KALALLKPILSAYEQHLAQHHEIDFEDMINKALTYVQAGQFKSPWRYIMVDEFQDISEPR 658 Query: 447 AALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNS 506 A L+ ALR N + ++FAVGDDWQAIYRFSGA ++LTT F FG + +LD T+RFN+ Sbjct: 659 ARLVKALRDNNKECSVFAVGDDWQAIYRFSGADVTLTTQFSNYFGSTTQSELDQTFRFNN 718 Query: 507 RIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL--DESQ----------------LDA 548 +IG+VA FI +NP Q+ K + SL + AV+LL D SQ +D Sbjct: 719 QIGKVATDFISKNPAQITKKITSLKQVNAPAVSLLKRDNSQFRSRKTGLIDEMANGAIDD 778 Query: 549 LLDKLSGYAKPEERILILARYHHMRPAS--LEKAATRWPKLQIDFMTIHASKGQQADYVI 606 +L +S + +LAR+ P++ L + ++P L ID + H SKG++ADYVI Sbjct: 779 VLAAISAKVCKPVTVYLLARFWFFLPSNIDLNRLNNQYPLLTIDAQSFHTSKGKEADYVI 838 Query: 607 IVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENP 666 IVGL++G+ GFP+ + EALL E FP AEERRL+YVALTRA+ RV+ + + Sbjct: 839 IVGLKKGAHGFPSEKVTPALNEALLAKKEKFPYAEERRLLYVALTRAKDRVYIIADMTES 898 Query: 667 SPFVEILKN 675 +PFV+ L N Sbjct: 899 NPFVKELVN 907 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 62/129 (48%), Positives = 84/129 (65%) Query: 175 QAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLL 234 ++Y L + FF VES+PL Q RA + + L+LAGAG+GKTSV++ R G+LL Sbjct: 198 ESYISKQLQTHEAFFDNVESNPLTLCQRRACIIDNDNNLLLAGAGTGKTSVMIGRTGYLL 257 Query: 235 ARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVS 294 +A ++ILLLA+GRKAA EMDERIR++L T+ I+A TFH L L II Q P +S Sbjct: 258 NSLQAKSDEILLLAYGRKAANEMDERIRDKLSTDKISATTFHRLGLSIIAQVEGGKPSLS 317 Query: 295 KLENDTAAR 303 L +D A+ Sbjct: 318 VLADDEKAK 326 >UniRef50_A3D9J8 UvrD/REP helicase n=11 Tax=Gammaproteobacteria RepID=A3D9J8_SHEB5 Length = 1004 Score = 245 bits (626), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 133/321 (41%), Positives = 188/321 (58%), Gaps = 27/321 (8%) Query: 387 KRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQR 446 K +L+ P++ ++ L +DF +I +A+ L++G+FISPW+ I+VDEFQDIS R Sbjct: 549 KAFELLEPIITRYEQHLAINGDIDFEDMIGKALTYLQRGQFISPWRFIMVDEFQDISEPR 608 Query: 447 AALLAALRKQ-----NSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTT 501 A L+ ALR +Q +LF VGDDWQAIYRFSGA +SLTT F FG R DLD T Sbjct: 609 ARLVRALRDSCAPHSKAQASLFCVGDDWQAIYRFSGADVSLTTQFTHYFGPTARNDLDLT 668 Query: 502 YRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL----------DESQLDALLD 551 +RFNS IG+VA +F+ QNP QL K + SLT AV++L DE +AL Sbjct: 669 FRFNSSIGQVATQFVTQNPTQLSKDIRSLTQVTSPAVSILRRGENEPPSKDEPSPNALEQ 728 Query: 552 KLSGYA----------KPEERILILARYHHMRP--ASLEKAATRWPKLQIDFMTIHASKG 599 L+ + + +LAR+ P + + T++P ++I+ + HASKG Sbjct: 729 ALTAISARISAGSDKLNSVPSVYLLARFWFQLPDKTQVNQLKTKYPNMKIECQSFHASKG 788 Query: 600 QQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWA 659 ++ADYV+I+G++ G GFP+ + +A LP E F AEERRL YVALTR +HR + Sbjct: 789 KEADYVVIMGMKTGMHGFPSMKITPPILDAFLPKTEAFEFAEERRLFYVALTRTKHRAYV 848 Query: 660 LFNKENPSPFVEILKNLDVPV 680 + + + SPFV L D P+ Sbjct: 849 IADMTDVSPFVTELLTKDYPI 869 Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 72/155 (46%), Positives = 100/155 (64%), Gaps = 5/155 (3%) Query: 177 YTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLAR 236 Y ++ L ++AD+F VES+PL Q RA + +++ L+LAGAG+GKTSV+V RAG+LL Sbjct: 189 YVQSQLVKFADYFEHVESNPLTEKQRRACIIDDNNNLLLAGAGTGKTSVMVGRAGYLLKS 248 Query: 237 GEASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKL 296 G+A + ILLLA+GRKAA+EMDERI+ +L TEDI A TFH+L L II + P +S Sbjct: 249 GQAKADDILLLAYGRKAADEMDERIKNKLGTEDIKASTFHSLGLKIIADVERAKPSLSPW 308 Query: 297 ENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTE 331 D A+ EL W E + + +R+ L E Sbjct: 309 AEDDKAK-EL----WVHHTLETLIEDEAYRKQLFE 338 >UniRef50_A8FVJ1 UvrD/REP helicase n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FVJ1_SHESH Length = 1020 Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 145/362 (40%), Positives = 194/362 (53%), Gaps = 76/362 (20%) Query: 391 LMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALL 450 L+ P+LK+++ L +DF +I +AI +E+GRF+SPW+ I+VDEFQDIS RA L+ Sbjct: 656 LLKPILKSYRDHLNNSGEIDFEEMIAKAIQYIEQGRFVSPWRFIMVDEFQDISEPRARLI 715 Query: 451 AALR-----------------------------------KQNSQTTLFAVGDDWQAIYRF 475 ALR K +LF VGDDWQAIYRF Sbjct: 716 RALRDSTCRVSKEKPAEEAKSAAGSKDKAKTRAKATSSVKSGRSASLFCVGDDWQAIYRF 775 Query: 476 SGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDK 535 SGA + LTT F FG + LD T+RFNSRIG+VA+RF+ QNP QLKK +NS+T G + Sbjct: 776 SGADVKLTTEFEHYFGSVTKSHLDLTFRFNSRIGDVASRFVTQNPMQLKKTINSITKGSR 835 Query: 536 KAVTL------------------LDESQLDALLDKLSGY---------------AKPEER 562 AV++ L++ QL+ L K S KPE + Sbjct: 836 SAVSIVKARAANKQSGDVSDQGHLNQGQLNQSLLKQSTLTETLNAITQLVNKEKGKPEFK 895 Query: 563 ------ILILARYHHMRPASLEKAATR--WPKLQIDFMTIHASKGQQADYVIIVGLQEGS 614 + +LARY + P E A P + I+ + HASKG++ADYVII+GL G Sbjct: 896 QKAKPTVYLLARYWFVLPDQQELALLNQACPGINIECHSFHASKGKEADYVIIMGLTTGV 955 Query: 615 DGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFVEILK 674 GFP+ + +ALLP EDF AEERRL YVALTRA+H+V+ L +++ SPFV + Sbjct: 956 YGFPSLKTTPPVLDALLPEAEDFNFAEERRLFYVALTRAQHKVYLLADRKGVSPFVHEIA 1015 Query: 675 NL 676 L Sbjct: 1016 QL 1017 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 65/177 (36%), Positives = 96/177 (54%), Gaps = 20/177 (11%) Query: 143 VNRLEEFDNCREAWRKCQAWL-KDIESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQ 201 +N EE ++ + W +DI++ R + Y + L + FF VES+PL Q Sbjct: 246 LNLDEETQTALSKLQQFKGWTDRDIDNIR----ELYVQQQLLRHKAFFDNVESNPLTEKQ 301 Query: 202 ARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERI 261 RA V +++ L+LAGAG+GKTSV+V RAG+L+ G+A + ILLLA+G+ AA+EM+ERI Sbjct: 302 RRACVIDDNNNLLLAGAGTGKTSVMVGRAGYLIESGQAIADDILLLAYGKVAAKEMEERI 361 Query: 262 RERLHT---------------EDITARTFHALALHIIQQGSKKVPIVSKLENDTAAR 303 + +L DI TFH+L L II + P +S ND + Sbjct: 362 KLKLGPLLGSPEKNQGQMGVGNDIRVSTFHSLGLRIITEVEGTTPKLSPWINDEKGK 418 >UniRef50_C4FEN7 Putative uncharacterized protein n=3 Tax=Bifidobacterium RepID=C4FEN7_9BIFI Length = 716 Score = 224 bits (572), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 176/558 (31%), Positives = 272/558 (48%), Gaps = 58/558 (10%) Query: 164 KDIESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKT 223 K S RL+ A + VE + L+ Q A+V H+ LVLAGAG+GKT Sbjct: 127 KRSNSRRLEPQPLLDAATIANARSTIGNVEKNELSDEQISAIVGAAHNTLVLAGAGTGKT 186 Query: 224 SVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHII 283 + +V WLL G+A P +IL+L+F RK+A+EM RI+ + I A TFH+L L I Sbjct: 187 TTIVGYIAWLLNTGKAQPNEILVLSFTRKSADEMSARIQAQTGAA-IRACTFHSLGLEIC 245 Query: 284 QQGS-KKVPIVSK-LENDT--AARHELFIAE--WR--------KQCSEKKAQAKGWRQWL 329 + + PI+ + + N AA +L +R K EK A A + Sbjct: 246 RSSTIANRPIIDENVANKAIKAAFDQLLTTSIPYRLLAFKLMPKHLGEKYAAAARLENFR 305 Query: 330 --TEEMQWSVPEGNFWDDEKL----QRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRD 383 ++ +S + D K R +D +L R +GG A Sbjct: 306 LPVKDYDFSQYAQHLVDTAKTIIQQMRSNNINVDGMRALNRRYGGKHTGRNA-------- 357 Query: 384 LFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDIS 443 + + L+ PL +A+ +A N +DF G+I AI ++ G++ ++++L+DE+QD+S Sbjct: 358 ---EMLDLIEPLYRAYAECFRANNGIDFPGMIVDAIQCVKTGKYRHEYRYVLIDEYQDMS 414 Query: 444 PQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH---ENFGEGERCDLDT 500 R AL+ ALR+Q +LF VGDDWQ+IYRF+G+ + L F E +GE + T Sbjct: 415 RPRYALIRALREQRD-FSLFCVGDDWQSIYRFAGSDIGLILDFDKLWEQWGETRMFQITT 473 Query: 501 TYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL------LDESQLDALLDKLS 554 T RF + + E + F+ +P K L+S TN +KK +L E + ++++L Sbjct: 474 TRRFRTSLIEASGDFVMADPSLYVKHLHS-TN-EKKDYSLKALGGKTPEERFTVIVEQLR 531 Query: 555 GYAKPEERILILARYHH-------------MRPASLEKAATRWPKLQIDFMTIHASKGQQ 601 K + +L+L RY R P++ I+FMT H SKG Q Sbjct: 532 KLPK-KASVLLLGRYRSDLNLITGQDREGLFRCDGNSITFLEKPEMTIEFMTAHKSKGLQ 590 Query: 602 ADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALF 661 D+V ++ G GFP+ E + LLP VE +P AEERRL YVA+TR + +++ + Sbjct: 591 RDFVFLLCCSGGLKGFPSTIPEEPLLGLLLPEVERYPHAEERRLFYVAMTRCKKKIFFVV 650 Query: 662 NKENPSPFVEILKNLDVP 679 ++ PS F+ L + P Sbjct: 651 DQTRPSRFIYELHDRICP 668 >UniRef50_Q15TK2 UvrD/REP helicase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15TK2_PSEA6 Length = 957 Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 134/357 (37%), Positives = 182/357 (50%), Gaps = 74/357 (20%) Query: 391 LMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALL 450 L+ P+ + ++ L +DF +I +AI +EKG F +PW++I+VDEFQDIS RA L+ Sbjct: 590 LLRPIFQHYQKHLSQHAYIDFEDMISKAITYVEKGHFTAPWRYIMVDEFQDISEPRARLV 649 Query: 451 AALR-------------------------KQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 +LR KQ+ ++F VGDDWQAIYRFSGA +SLTT Sbjct: 650 RSLRDSTRSVSALPRKNESVPSSREVLPRKQSQSASIFCVGDDWQAIYRFSGADVSLTTQ 709 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTN-GDKKAVTLLDES 544 F + FG LD T+RFN+RIG+VA +FI +NP Q+ K + SL D + L ++ Sbjct: 710 FTQYFGHSIENVLDQTFRFNNRIGDVATQFISRNPAQITKNIRSLVKVADPRIRVLYSDT 769 Query: 545 QLDA---------LL-----------------------------------DKLSGYAKPE 560 +L++ LL D L +KP Sbjct: 770 RLNSETQSSNTEKLLHQALATLAGKVDEISEQHNKRGKTEKIRPTQSSKKDTLRQCSKPT 829 Query: 561 ERILILARYHHMRP--ASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFP 618 + ILAR+ P LE ++ KL I ++ HA+KG++ADY II G+ G GFP Sbjct: 830 --VYILARFWFQLPDREGLEALNKQYTKLHIKCLSFHAAKGKEADYAIITGMTAGKHGFP 887 Query: 619 AAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFVEILKN 675 A S + EALLP E F AEERRL YVALTRA+H V+ L + S FV L N Sbjct: 888 ADKVTSPVVEALLPKQETFTYAEERRLFYVALTRAKHHVYVLADMTQASAFVTELMN 944 Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 65/140 (46%), Positives = 93/140 (66%) Query: 175 QAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLL 234 + Y + L +ADFF++VES+PL Q RA + + + L+LAGAG+GKTSV+V RAG+LL Sbjct: 218 EGYIQKQLHLHADFFQRVESNPLTDKQRRACIIDDDNNLLLAGAGTGKTSVMVGRAGYLL 277 Query: 235 ARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVS 294 G+A P+ ILLLA+G+KAA E+DERI+ +L + I A TFH+L L+II K P +S Sbjct: 278 TSGQAKPDDILLLAYGQKAATEIDERIKHKLDGQSIKASTFHSLGLYIITSVEGKKPTLS 337 Query: 295 KLENDTAARHELFIAEWRKQ 314 ND +++ +A Q Sbjct: 338 PWVNDEQKKNKWVLASLENQ 357 >UniRef50_A1A2S5 Putative helicase IV n=2 Tax=Bifidobacterium RepID=A1A2S5_BIFAA Length = 690 Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 164/540 (30%), Positives = 260/540 (48%), Gaps = 66/540 (12%) Query: 187 DFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILL 246 D +E L+ Q A+ H+ LVLAGAG+GKT+ ++ WLLA A+PE+IL+ Sbjct: 122 DIIGNIEKHELSDEQISAIAGAGHNTLVLAGAGTGKTTTIIGYIAWLLATKRAAPEEILV 181 Query: 247 LAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGS-KKVPIVSKLENDTAARH- 304 L+F + +A +M +RI + I A TFH+L L I + + PI+ ++ R Sbjct: 182 LSFTKASAGDMSQRIMAST-GKTIRACTFHSLGLEICRAATIANRPIIDGHASNAVVRDT 240 Query: 305 --ELFIAEWRKQCSEKKAQAK---GWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRW 359 L + K +K G + + +P ++ ++ Q L Sbjct: 241 FDRLLAQNIPYRLLAFKLMSKELFGKYGAAAKREDFQLPTDDYAFNQYRQS-LVENAQTI 299 Query: 360 VSLMRMHGGAQAEMIASAPEEIRDLFSKR-----------IKLMAPLLKAWKGALKAENA 408 + MR + + +R+L +R ++L+ PL A+ G +A Sbjct: 300 IQHMRQNN--------IGIDGMRELNERRGGKHIGRNREMLQLVEPLYNAYVGNFRATQG 351 Query: 409 VDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDD 468 +DF G+I AI + +G + +K++L+DE+QD+S R L+ ALR+Q S TLF VGDD Sbjct: 352 IDFPGMITDAIRCVRRGAYRHLYKYVLIDEYQDMSRPRYELIRALREQ-SDFTLFCVGDD 410 Query: 469 WQAIYRFSGAQMSLTTAFHE---NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKK 525 WQ+IYRF+G+ + L F + ++G + TT RF + + + F+ Q+ K Sbjct: 411 WQSIYRFAGSDIHLILDFADIWRDWGPTRMFQITTTRRFRQSLIDASGAFVMQDKSLYAK 470 Query: 526 PLNSLTNGDKKAVTL------LDESQLDALLDKLSGYAKPEERILILARY---------- 569 L + + DKK +L E + DA++++L K +L+L RY Sbjct: 471 QLRNPS--DKKDYSLKALGGATQEERFDAIIEQLRKLPKTAS-VLMLGRYKSDLNLLSRN 527 Query: 570 ----------HHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPA 619 H LEK PK+ I+FMT H SKG Q D+V ++ G GFP+ Sbjct: 528 DRDGLFQIDEHTGGIVFLEK-----PKMDIEFMTAHKSKGLQRDFVFLLCCSGGLKGFPS 582 Query: 620 AARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFVEILKNLDVP 679 A E + LLP VE P AEERRL YVA+TR + +++ + ++ PS F+ L + P Sbjct: 583 AIPEEPLLGLLLPEVERMPHAEERRLFYVAMTRCKKKLFFVVDQSRPSRFMYELHDKICP 642 >UniRef50_B9NSL7 UvrD/REP helicase n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NSL7_9RHOB Length = 971 Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 117/296 (39%), Positives = 173/296 (58%), Gaps = 14/296 (4%) Query: 389 IKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAA 448 + + P+ + ++ L+ E +DF +I +A E G++ SP+KHILVDEFQDIS R Sbjct: 555 LSIFEPVYREYQSRLEGEGRIDFEDMILRACTYAEDGKYKSPFKHILVDEFQDISKSRGR 614 Query: 449 LLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFG---EGER-----CDLDT 500 L+ AL+ Q+ +FAVGDDWQ+I+RF+G+ ++L F + FG +G+ DL Sbjct: 615 LVKALKAQHPDGRVFAVGDDWQSIFRFAGSDINLMRRFGDEFGGTFDGQTGVHRTVDLGR 674 Query: 501 TYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDA---LLDKLSGYA 557 T+R +I E A +F+ QNP QLKK + S +A+ ++ + DA L D L A Sbjct: 675 TFRSVDQIAEAAMKFVLQNPAQLKKTVMSAGVAKSQALKVVPTFRHDADAKLKDTLRALA 734 Query: 558 KPEE---RILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGS 614 + +L+L RY ++RP +L +P L I + TIHASKG +AD+VI++GL G Sbjct: 735 ANDGDQISVLLLGRYRNLRPDNLTVLRREFPCLDISYKTIHASKGLEADHVIVLGLHRGR 794 Query: 615 DGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFV 670 GFP+ + + E + P E F +AEERR+ YVALTRARH V + + S FV Sbjct: 795 TGFPSEIVDDPLLELVSPEAEPFENAEERRVFYVALTRARHTVTLMSSASKQSAFV 850 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 69/164 (42%), Positives = 97/164 (59%), Gaps = 7/164 (4%) Query: 141 LPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEAMLTEYADFFRQVESSPLNPA 200 LP LE D R + + ++ +S R + + + L E+++FF ES+PL P Sbjct: 152 LPDEALE--DRIRSDANRIKKFVSHSDSLRNRAIETFEGRQLAEWSEFFDTFESNPLTPE 209 Query: 201 QARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDER 260 Q A++ E + LVLAGAGSGKTSV+ A+AG+L+ +P +ILLLA+ + AA+EM ER Sbjct: 210 QRTAIIADEDATLVLAGAGSGKTSVITAKAGYLIKTKTRAPSEILLLAYAKDAAKEMSER 269 Query: 261 IRERLHTEDITARTFHALALHIIQ--QGSKKVPIVSKLENDTAA 302 I R E + ARTFHALA II +GSK P ++K D A Sbjct: 270 IELRC-GEPLEARTFHALANGIIGIVEGSK--PALAKHATDDKA 310 >UniRef50_B0TT01 UvrD/REP helicase n=4 Tax=Shewanella RepID=B0TT01_SHEHH Length = 1013 Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 116/307 (37%), Positives = 178/307 (57%), Gaps = 24/307 (7%) Query: 389 IKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISP------WKHILVDEFQDI 442 + L + ++ ++ L A N +DFS +I QA+ + + F +K+I+VDEFQDI Sbjct: 572 LHLFSWVITRYQAQLTAHNTLDFSDMIAQALNMAREKDFHQKTAERFRYKYIMVDEFQDI 631 Query: 443 SPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTY 502 S +RA L+ ALR N LF VGDDWQAIYRF+G+ +SLTT F FG + LD T+ Sbjct: 632 SHERADLVKALRDSNPGCALFCVGDDWQAIYRFTGSDLSLTTEFEPTFGATQTIMLDKTF 691 Query: 503 RFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEER 562 RFN+RI +VA+RFIQ NP QLKK L + + D V LL ++ A+ + + ++ Sbjct: 692 RFNNRIEKVASRFIQANPAQLKKQLKTHSQSDNPEVCLLVNNKQIAIEQTFASIMEVTDK 751 Query: 563 -----------ILILARYHHMRPASLEKAAT---RWPKLQIDFMTIHASKGQQADYVIIV 608 +++++R+ +SL+ + R+P+L I + HASKG+QAD+VI++ Sbjct: 752 TRADIDCEAVSVMLISRFK----SSLKDLSVWQKRYPQLSISGFSAHASKGKQADFVIVL 807 Query: 609 GLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSP 668 + + GFP + E LLP ++++ D EERRL YVAL+RA+ V+ S Sbjct: 808 DVNDDKYGFPCKIDSDPILETLLPQLDNYADTEERRLFYVALSRAKQTVFVQAELGKESV 867 Query: 669 FVEILKN 675 FV+ L++ Sbjct: 868 FVKELRS 874 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 62/191 (32%), Positives = 98/191 (51%), Gaps = 14/191 (7%) Query: 118 KWLTREQTSGVQQQIRQALSALPLPVNRLE-EFD----NCREAWRKCQAWLKDIESARLQ 172 ++L + +Q + R AL A L + FD NCR A ++K + + Sbjct: 113 RYLRDSDKTLLQSEYRGALDAFNLSEHFTTLGFDTSKLNCRLA-----KFIKQPDIFTER 167 Query: 173 HNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGW 232 +NQ + + L Y + F +E++PL Q A V E++ LV+AGAG+GKTS + A+A + Sbjct: 168 YNQWWQDKQLDAYKNLFDSLEANPLTQFQREACVVDENNTLVIAGAGTGKTSTMAAKAAY 227 Query: 233 LLARGEASPEQILLLAFGRKAAEEMDERIRERLHTED----ITARTFHALALHIIQQGSK 288 L+ +G A P+ IL+LA+G+ A E+++R+ I TFHAL II+ Sbjct: 228 LVNQGLAQPQDILMLAYGKDAQVELEQRVSSIAGGSGALTAIKVSTFHALGKEIIEYYLN 287 Query: 289 KVPIVSKLEND 299 + VS L D Sbjct: 288 RSSQVSVLARD 298 >UniRef50_C4LDL2 UvrD/REP helicase n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LDL2_TOLAT Length = 1013 Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 118/313 (37%), Positives = 173/313 (55%), Gaps = 34/313 (10%) Query: 389 IKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAA 448 + L P+ A++ LK ++ +DFS +I +A L+ GRF + ++LVDEFQD+S R Sbjct: 559 LTLFKPIFDAYEQHLKEQSEMDFSDMIAKATQALQDGRFQHHYNYVLVDEFQDLSGGRGR 618 Query: 449 LLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRI 508 LL AL + LFAVGDDWQ+IYRF+G+ + T F F + LD +YRFN+RI Sbjct: 619 LLQALLESRPNMRLFAVGDDWQSIYRFNGSDLRFFTRFDHRFKPAKMLPLDKSYRFNNRI 678 Query: 509 GEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALL--------DKLSGYA--- 557 E+++ F+ +NP QLKK + + + AV LLD ++ + K YA Sbjct: 679 HELSSMFVTRNPEQLKKQIATHVQVEYPAVRLLDIQEMRESIPPSLSRREQKAEAYALQV 738 Query: 558 ----------------KPEERILILARYHH-----MRPASLEKAATRWPKLQIDFMTIHA 596 K + ++++ RY M L +PKL I++ T HA Sbjct: 739 RRALKLCSTREQRLNKKSKASVMLIGRYREENMSIMSGIDLNMLGRMFPKLDINYRTAHA 798 Query: 597 SKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHR 656 SKG +ADYVII+GL++ DGFP+ + + LLP E + AEERRL+YVA+TRARH Sbjct: 799 SKGLEADYVIILGLEK--DGFPSTRENDELIDLLLPEPETYVFAEERRLLYVAITRARHY 856 Query: 657 VWALFNKENPSPF 669 V+ +F+ +N S F Sbjct: 857 VFMVFDSQNASEF 869 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 61/133 (45%), Positives = 79/133 (59%), Gaps = 4/133 (3%) Query: 167 ESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVL 226 E AR +NQ +L +Y FF +ES PL+ Q +A V E LV+AGAG+GKTS + Sbjct: 183 EFARKDYNQQVVPKLLGKYGSFFDTIESQPLSQPQRQACVTEEDHTLVVAGAGTGKTSTI 242 Query: 227 VARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERL---HTEDITARTFHALALHII 283 + +AG+LL G A P+ ILLLAFG KAA EM ERI RL H I A TFHA I+ Sbjct: 243 IGKAGYLLHSGLAEPDNILLLAFGNKAAGEMTERIALRLPEAHAR-IRATTFHAFGNQIM 301 Query: 284 QQGSKKVPIVSKL 296 + K P +++ Sbjct: 302 AEIQGKKPTLTRF 314 >UniRef50_A7ZI15 Helicase, UvrD family n=1 Tax=Escherichia coli E24377A RepID=A7ZI15_ECO24 Length = 1010 Score = 205 bits (522), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 118/314 (37%), Positives = 179/314 (57%), Gaps = 33/314 (10%) Query: 389 IKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAA 448 I+L P+ A++ LK + +DFS +I +A L++G+F + ++LVDEFQD+S R Sbjct: 553 IELFKPVYDAYEAHLKEQREMDFSDMIAEATTALQEGQFHHRYDYVLVDEFQDLSGGRGK 612 Query: 449 LLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRI 508 LL AL LFAVGDDWQAIYRF+G+ + T F F + LD +YRFN+RI Sbjct: 613 LLKALLATRDNMRLFAVGDDWQAIYRFNGSDLRFFTRFDHQFSPAKMLPLDKSYRFNNRI 672 Query: 509 GEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD-ESQLDA--LLDK------------- 552 E+++ F+ +NP QLKK + +L+ + AV LLD + Q+ L D+ Sbjct: 673 HELSSAFVTRNPAQLKKEITTLSQVEHAAVQLLDIQEQMHGIDLSDRNQRKAEAYRLQIK 732 Query: 553 --LSGYAKPEER--------ILILARYH-----HMRPASLEKAATRWPKLQIDFMTIHAS 597 L+ + E R ++++ RY ++ ++ +P L I + T HAS Sbjct: 733 RALTRCHRREVRLNSTRRAPVMLIGRYRLENMRELKDMDVQALMAEFPLLDIQYQTAHAS 792 Query: 598 KGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRV 657 KG +A+YV+++GL++G FP+A + + LLP E + AEERRL YVA+TRARH V Sbjct: 793 KGLEANYVLLLGLEKGC--FPSAKENDELIDLLLPEQEPYLFAEERRLFYVAVTRARHYV 850 Query: 658 WALFNKENPSPFVE 671 + +F+ +N S FVE Sbjct: 851 FMIFDSQNTSAFVE 864 Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 59/119 (49%), Positives = 74/119 (62%), Gaps = 2/119 (1%) Query: 167 ESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVL 226 ESAR N+ +L+ Y FF Q+ES PL+ Q +A V E LV+AGAG+GKTS L Sbjct: 177 ESARSHFNEKVIPQLLSAYQTFFEQIESQPLSAPQRKACVTNEDHTLVVAGAGTGKTSTL 236 Query: 227 VARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTE--DITARTFHALALHII 283 + +AG+LL G A PE IL+LAFG KAA EM ERI ERL + A TFHA ++ Sbjct: 237 IGKAGYLLQAGLAQPENILMLAFGNKAAREMAERITERLPESGGKLKATTFHAFGNRVV 295 >UniRef50_Q1Q866 UvrD/REP helicase n=4 Tax=Gammaproteobacteria RepID=Q1Q866_PSYCK Length = 955 Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 106/293 (36%), Positives = 170/293 (58%), Gaps = 11/293 (3%) Query: 387 KRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQR 446 K+ +++ L A+ L A +++DF +I +AI +++ G++ W++ILVDEFQDIS R Sbjct: 538 KKTRILTDLHNAYVEELVATDSIDFDDMIIRAIAVVDNGQYKPQWRYILVDEFQDISASR 597 Query: 447 AALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNS 506 + ++ ++ +L VGDDWQ+IYRFSG ++ LTT F+E G L T+R+N+ Sbjct: 598 MEFVNSIIEKGPDPSLTVVGDDWQSIYRFSGGKLELTTRFNELVGPHTLTMLQKTFRYNN 657 Query: 507 RIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDE---------SQLDALLDKLSGYA 557 I + A FI +NP Q +K + + ++ V LLD+ S++ ++ K+ Sbjct: 658 SIADTAGTFIMENPEQYQKHIKTHDVINEPQVYLLDDKTGEENGLYSRVAEVVSKIRA-N 716 Query: 558 KPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGF 617 PE I I+ARY+++ S + K I F + H SKG +ADY I++G +G GF Sbjct: 717 DPEGSIAIIARYNYLLKDSRDFLGKENSK-GIHFWSFHKSKGLEADYCILIGFFQGKSGF 775 Query: 618 PAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFV 670 P RE + EALLP ++ FP +EERRL+YV +TR + + + + + PS FV Sbjct: 776 PNGNREDAIPEALLPTLDSFPHSEERRLLYVGITRCKKKSYIIASPTAPSEFV 828 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 48/115 (41%), Positives = 69/115 (60%), Gaps = 7/115 (6%) Query: 176 AYTEAM-LTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLL 234 AY E + L FF VES+PL Q V+ +VLA AG+GKTSV+VA+A L+ Sbjct: 171 AYHEKINLERRKSFFDSVESNPLTDEQRLGVLRSNDKNMVLAAAGTGKTSVIVAKALDLI 230 Query: 235 ARGEASPEQILLLAFGRKAAEEMDERIRER------LHTEDITARTFHALALHII 283 RG A+P++IL+LA+ + AAEE+ +R+ ++ + TE TFHAL I+ Sbjct: 231 DRGLAAPQEILVLAYNKSAAEELKKRLADKAENSGIVLTESPQISTFHALGRKIL 285 >UniRef50_A4WTK0 UvrD/REP helicase n=8 Tax=Rhodobacterales RepID=A4WTK0_RHOS5 Length = 978 Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 123/314 (39%), Positives = 178/314 (56%), Gaps = 21/314 (6%) Query: 389 IKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAA 448 + + AP+ ++ L +DF +I +A +E GR+ SP++HILVDEFQDIS RA Sbjct: 551 LAVFAPVFAEYQRRLGGR--IDFEDMILRAADYVETGRYTSPFRHILVDEFQDISQSRAR 608 Query: 449 LLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFG---EGE-----RCDLDT 500 L+ AL+ Q+ + +FAVGDDWQ+I+RF+G+ + L F FG +GE DL Sbjct: 609 LVKALKAQHPEVRIFAVGDDWQSIFRFAGSDIHLMRHFGREFGGDFDGETGVHRTVDLGR 668 Query: 501 TYRFNSRIGEVANRFIQQNPGQLKK---PLNSLTNGDKKAVTLL---DESQLDALLDKLS 554 T+R +I A F+ +NP Q++K P K VT+ DE +L A+L LS Sbjct: 669 TFRSVDQIAFAARTFVLRNPAQIQKQIVPAGIAAEPAIKVVTVSKGEDEKKLSAVLAALS 728 Query: 555 GYAKPEER---ILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQ 611 PE + +L+L RY + P + R+P+L I F TIHASKG +AD+VI++ Sbjct: 729 AALAPEAKPATVLLLGRYRFLEP-DMRDLGRRYPRLNISFKTIHASKGLEADHVILLNAD 787 Query: 612 EGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPF-V 670 G GFP+ + + + P E FP+AEERR+MYVA+TRARH + L + PS F V Sbjct: 788 SGRTGFPSEIVDDPLLSLVSPEEEAFPNAEERRVMYVAMTRARHTLTILASNARPSSFVV 847 Query: 671 EILKNLDVPVARKP 684 E+ + D +A P Sbjct: 848 ELRSDPDYGIAAAP 861 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 61/129 (47%), Positives = 81/129 (62%), Gaps = 3/129 (2%) Query: 162 WLKDIESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSG 221 ++ + +AR + + L + DFF +ES PL P Q +VV E + LVLAGAGSG Sbjct: 167 FIAEPRAARADAIATFVTSELERWRDFFDTIESKPLTPEQRLSVVVDEDATLVLAGAGSG 226 Query: 222 KTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALH 281 KTSV+ A+A +L+ G PE+ILLLAF + AAEEM ER+ R I+ARTFHA+A Sbjct: 227 KTSVITAKAAYLVKAGIRKPEEILLLAFAKNAAEEMSERVEARSGVP-ISARTFHAIAYD 285 Query: 282 IIQ--QGSK 288 II +GSK Sbjct: 286 IIGIVEGSK 294 >UniRef50_B1CC30 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CC30_9FIRM Length = 663 Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 124/378 (32%), Positives = 209/378 (55%), Gaps = 42/378 (11%) Query: 329 LTEEM-QWSVPEGNFWDD--EKLQRRLASRLD-------RWVSLMRMHGGAQAEMIA--- 375 L EE+ ++++ +DD E++ R A + +++LM+ ++ Sbjct: 284 LNEELDKYNIKRDFSYDDIDEEISRVFAYNISFIKKLIANFITLMKTTARKSENVLKIDN 343 Query: 376 --SAPEEIRDLFSKRI-KLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWK 432 + EEIR SK KL+ P+ +A++ L N +DF+ +I +A + KG ++ +K Sbjct: 344 YYNKAEEIR---SKSFYKLVLPIYEAYEKILYHNNQIDFNDMILKATDYVNKGLYLKDYK 400 Query: 433 HILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGE 492 +IL+DEFQDIS R L+ ++ ++ S++ +FAVGDD+Q+I+RF+G+ +++ F + + Sbjct: 401 YILIDEFQDISSSRMRLVDSIYRK-SESEIFAVGDDYQSIFRFTGSDINIFYDFEKEYN- 458 Query: 493 GERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKA--VTLLDESQLDAL- 549 ++ ++ YRF+S I ++N+FI QNP Q+KK L S G VT +++ L L Sbjct: 459 AKKYLIENNYRFDSNIANLSNKFILQNPHQIKKELKSKRAGVSSVEFVTSPNKNNLTKLF 518 Query: 550 LDKLSGYAKP-EERILILARYHH--MRPASLEKA-------------ATRWPKLQIDFMT 593 LDKL Y+ P +++L RY +R A E+ R P L I+FMT Sbjct: 519 LDKL--YSLPIGSEVMLLGRYKKDILRYAKTEETEITVNEEKEVNIKVIRRPDLDINFMT 576 Query: 594 IHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRA 653 +H +KG + DYV I+ GFP + + + LL E+F AEERRL YVA+TRA Sbjct: 577 VHKAKGLECDYVFILNTFNNLMGFPCNITDDNLIKLLLKNKENFLYAEERRLFYVAMTRA 636 Query: 654 RHRVWALFNKENPSPFVE 671 + +++ + ++ + SPFVE Sbjct: 637 KEKLFIMVDRNSLSPFVE 654 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 1/103 (0%) Query: 182 LTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASP 241 + E D +E L+ Q V + E ++L +AGAG GKT+ L+AR +L+ + +A+ Sbjct: 1 MNEQKDLITNIEEKELDKTQTECVNSEERNILAIAGAGCGKTTTLLARVKYLIEKRKANK 60 Query: 242 EQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQ 284 E IL+L+F + E+ ERIR H EDI TFH L II Sbjct: 61 EDILILSFTNSSTNELKERIRRVTH-EDIDVFTFHKLGKSIIN 102 >UniRef50_A4ALZ1 Helicase IV n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4ALZ1_9FLAO Length = 1024 Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 111/320 (34%), Positives = 172/320 (53%), Gaps = 37/320 (11%) Query: 389 IKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAA 448 ++L P+ K+++ LK N +DFS +I+ A + +F SP+K+I++DEFQDIS R Sbjct: 508 LELYEPIFKSYESYLKELNEIDFSDMINLATNSILNNQFTSPYKYIIIDEFQDISQARYK 567 Query: 449 LLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEG---------ERCDLD 499 L+ +L Q T LF VGDDWQ+IYRF+G+ + + T F + F R +++ Sbjct: 568 LIKSLLDQKPDTKLFCVGDDWQSIYRFAGSDIGVFTGFSKYFKSSSIKGFKRTTSRSNIE 627 Query: 500 TTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD--------ESQLDALLD 551 TYRF +++ ++++ FI +NP Q+KK L S + VT+ +S AL + Sbjct: 628 YTYRFENKLIDLSSSFILKNPNQIKKTLKSHKKSNYSPVTIHKYRDAERNGKSAYQALNN 687 Query: 552 KLSGYAKPEE----RILILARYHHMR---------PASLEKAATRWPKL-------QIDF 591 L + E+ +L+L RY R + R+ + I+F Sbjct: 688 ALEIINEKEKSNNISVLLLGRYDFERRIVEDSQNIAKKYNEQLNRYDYVFKGNQNHTINF 747 Query: 592 MTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALT 651 +TIHASKG +ADYV+I+ G+ GFP+ + + LL + FP+ EERR YVALT Sbjct: 748 LTIHASKGLEADYVVILNGNSGTYGFPSEISDDPLLNFLLSKADQFPNGEERRSFYVALT 807 Query: 652 RARHRVWALFNKENPSPFVE 671 RA+ +V L + E PS F+E Sbjct: 808 RAKKQVHILSSHEYPSKFIE 827 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 71/122 (58%), Gaps = 1/122 (0%) Query: 172 QHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAG 231 + N + + L + D VE L+ Q A++ E + L++AGAGSGKT+ + + Sbjct: 122 ERNNKFVKNELEKANDLLSDVEGHSLDKQQRNAIIVNEDNNLIIAGAGSGKTTTIAGKVK 181 Query: 232 WLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVP 291 +L R + PE ILL++F RK+A+EM ERI++++ + +TFH L L I+ + S + P Sbjct: 182 YLTQRLKVKPESILLISFTRKSADEMAERIQKKMDIS-LPVKTFHKLGLDILAESSNQKP 240 Query: 292 IV 293 + Sbjct: 241 SI 242 >UniRef50_A3X5L1 Helicase IV n=1 Tax=Roseobacter sp. MED193 RepID=A3X5L1_9RHOB Length = 951 Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 113/303 (37%), Positives = 171/303 (56%), Gaps = 25/303 (8%) Query: 389 IKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAA 448 + + P+L+ ++ ++ +DF ++ +A +E G + SP++HILVDEFQDIS RA Sbjct: 504 LAVFEPVLRQYQ--IELGERIDFEDMVLRAAGYVESGAYQSPFRHILVDEFQDISQDRAR 561 Query: 449 LLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGE---------RCDLD 499 L+ AL+ Q+ +FAVGDDWQ+IYRF+GA + + +F FG GE DL Sbjct: 562 LVGALKTQHGDARIFAVGDDWQSIYRFAGADIHIMRSFGSRFG-GEFGPQKDIHQVVDLG 620 Query: 500 TTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL---DESQLDALLDKLSGY 556 T+R +I A RF+ QNP Q++K + + A+ ++ Q + LL+ L+ Sbjct: 621 RTFRSVDKIALAARRFVLQNPAQIEKTIIPAAEAEGPALRVVWTKRAKQENELLETLANL 680 Query: 557 A--KPEER-------ILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVII 607 + E+R +L+LARY H RP + ++P L + F TIH SKG +AD+V+I Sbjct: 681 TEVRTEDRGSGKVASVLLLARYRHERP-DMAAIGRKFPNLSLSFKTIHGSKGLEADHVVI 739 Query: 608 VGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPS 667 +G G GFP+ + + + P E F AEERR+MYVA+TRAR V L ++ PS Sbjct: 740 LGCNNGKYGFPSEITDDPILSLVSPEGEPFQHAEERRIMYVAMTRARTTVTLLASEAEPS 799 Query: 668 PFV 670 FV Sbjct: 800 CFV 802 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 75/202 (37%), Positives = 104/202 (51%), Gaps = 4/202 (1%) Query: 145 RLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARA 204 RLE+ + + + +LKD R A E LT++ F +VE PL+ Q RA Sbjct: 102 RLEDTIDDEAVCERIRDFLKDPNLVRDGAIAAQLERDLTQWESFLDKVEIQPLSAEQRRA 161 Query: 205 VVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRER 264 V++ E + LVLAGAGSGKTSV+ A+A +LL G P +IL LAFGR+AA EM RI + Sbjct: 162 VLSEEDATLVLAGAGSGKTSVITAKATYLLKSGIREPGEILPLAFGREAANEMASRIGQA 221 Query: 265 LHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKG 324 + + + A TFHALA HII P ++ D + R+ + K A Sbjct: 222 CNAQ-VKAWTFHALAYHIIGDVEGTKPPLASHAGDQKRYSAVIRRILRQLVANDKKIADM 280 Query: 325 WRQWLTEEMQWSVPEGNFWDDE 346 W T Q+ + G+ WD E Sbjct: 281 LFDWFT---QFPIECGSEWDYE 299 >UniRef50_A5UP48 DNA helicase, UvrD/REP helicase family n=2 Tax=Methanobrevibacter smithii RepID=A5UP48_METS3 Length = 610 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 135/526 (25%), Positives = 253/526 (48%), Gaps = 63/526 (11%) Query: 188 FFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLL 247 FF+ V S PL+ Q A V ++ ++AGAG+GKT L+A+ +L+A+ PE IL L Sbjct: 94 FFKTVNSKPLDTQQKIACVLDSKNVQIIAGAGTGKTFTLIAKIKYLIAKKHVRPEDILCL 153 Query: 248 AFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDT------- 300 +F + ++ ++ E++ RTFH+L +I+Q K VS +EN+ Sbjct: 154 SFSNTSVRDLKGKL-----PENVEIRTFHSLGRSVIKQHHK----VSVIENNEILAIIND 204 Query: 301 --AARHELFIAEWRKQCSEKKAQAKGW------RQWLTEEMQWSVPEGNFWDDEKLQRRL 352 A + + + + C + + R+ L E++ + + F Sbjct: 205 YLANANTDTLKDILEFCDSYFLNIESYIIRRNDRKELLNELKEAFTKVAF---------- 254 Query: 353 ASRLDRWVSLMRMHGGAQ---AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAV 409 L +++L + + + + +S ++ D+F +K+ ++ L + Sbjct: 255 KPLLADFINLFKGNNFTKDYFSYFRSSNDDKDHDIF---LKIAEDFYSYYQKYLDMHQQI 311 Query: 410 DFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDW 469 DF+ +I+++ +++K +++ILVDE+QD + L+ +L+ + + L VGDDW Sbjct: 312 DFNDMINESSKLIKKYGLKKHYRYILVDEYQDTTYTNYNLIKSLQDK-TDAHLTVVGDDW 370 Query: 470 QAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS 529 Q+IY F G + + F E F +R ++ TYR + ++A FI +NP Q++K L S Sbjct: 371 QSIYGFRGTNIEFFSHFEEYFENPQRIFIEKTYRNPQELIDIAGSFIMKNPKQIRKSLKS 430 Query: 530 LTNGDKKAVTLLDES----QLDALLDKLSGYAKPEERILILARYHH-----------MRP 574 N K + + + + + + + +K E +LIL R ++ ++ Sbjct: 431 PKNLKKPVKIIYPQKNPIEKREMIYNLIKDLSKKSEDVLILGRTNNNINQFIKHRNLVKK 490 Query: 575 ASLEK-------AATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIME 627 +L+K T + + T+H+SKG +AD VII+ + + GFP+ + + Sbjct: 491 GNLKKDKFLRILDKTDKSMNNVYYRTLHSSKGLEADNVIIINMVDDYLGFPSKLKTHSVL 550 Query: 628 EALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFVEIL 673 + D+ +EERRL YV LTR+++ V+ + +K NPS F+E L Sbjct: 551 NYVNTKNYDYKYSEERRLFYVGLTRSKNNVYLISDKNNPSEFIEEL 596 >UniRef50_B9AEJ9 Putative uncharacterized protein n=2 Tax=Methanobrevibacter smithii RepID=B9AEJ9_METSM Length = 858 Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 136/533 (25%), Positives = 245/533 (45%), Gaps = 61/533 (11%) Query: 182 LTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASP 241 L + A FF + L+ Q A + + L ++AGAG+GKT L+A+A +L+ + SP Sbjct: 18 LKDNASFFDNFDGKSLDEQQRIACILNDCDLEIIAGAGTGKTHTLLAKAEYLIEKKNISP 77 Query: 242 EQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTA 301 + IL L+F + EE+ E++ + T T H+ L +I + K D Sbjct: 78 DDILFLSFSKSCVEELIEKLNYNVPTS-----TIHSFGLSLINEYRDKEVY------DGR 126 Query: 302 ARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQR----------- 350 ++F E+ K S+K+ +T + ++ + +L R Sbjct: 127 GFKKIF-EEYLKTASDKQIDD------ITNYCENNLNSHDMIKLIELDREIEKFNHLISK 179 Query: 351 -RLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKR---------------IKLMAP 394 ++SR+ ++ L + G ++ + D + I+++ P Sbjct: 180 SNISSRIKSFIDLFKGKGYVASDFKKIKSKCKHDFETNNGGYYTNKNYLNNMAFIQIVEP 239 Query: 395 LLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALR 454 + + ++G L + +DF+ +I++AI ++EK + +K+I VDE+QDIS + + L Sbjct: 240 VFRFYEGYLFRNHLIDFNDMINKAIDLVEKEGIFNNFKYIFVDEYQDISYKNFQFIKTL- 298 Query: 455 KQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANR 514 KQ L VGDDWQ+IY F + ++L F + F R ++ TYR + ++A Sbjct: 299 KQACNAHLVVVGDDWQSIYGFRDSDITLFNDFCDYFPNANRVFIEKTYRNPQELIDIAGN 358 Query: 515 FIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYH---- 570 FI +N Q KK L S +K V ++ +S D++ + + +K E++ IL RY+ Sbjct: 359 FIMKNESQFKKSLKS-DKSIEKPVKIIFDSDSDSIYNLIYNLSKDNEKVFILGRYNGDID 417 Query: 571 ---------HMRPASLEKAATRWPKLQ-IDFMTIHASKGQQADYVIIVGLQEGSDGFPAA 620 S ++ + ++ +++ TIH +KG +ADYV+++ + GFP Sbjct: 418 KFIFDTDLVKKSKGSYKQITNDYESIKNVEYRTIHKAKGLEADYVVLINVFNRDWGFPNK 477 Query: 621 ARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFVEIL 673 + D EERRL YVA+TRA+ V+ N S +++ L Sbjct: 478 FYPPYFVNLIQDWDYDKKLEEERRLFYVAITRAKKGVYIFTEDYNQSEYIDEL 530 >UniRef50_D2MH56 Helicase IV n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MH56_9BACT Length = 893 Score = 184 bits (467), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 113/294 (38%), Positives = 164/294 (55%), Gaps = 12/294 (4%) Query: 389 IKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAA 448 + ++ PL + + L+ N +DF ++ QA L GR P+K ILVDEFQDIS RA Sbjct: 533 LNVIIPLREIYDRKLRDNNELDFDDMLAQASDALRDGRMRHPYKLILVDEFQDISWSRAE 592 Query: 449 LLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRI 508 +L A+ +QN LF VGDDWQAIY F+GA + + T F + F L +R N I Sbjct: 593 MLRAMLEQNQDCKLFVVGDDWQAIYGFAGADVLIMTNFRDEFDVAAEDQLTQNFRSNQGI 652 Query: 509 GEVANRFIQQNPGQLKKPL---NSLTNGDKKAVTLLDESQLDALLD-KLS----GYAKPE 560 VA+ F+Q+NP Q+ K + +SL G V + + L++ KLS + Sbjct: 653 VNVASWFVQKNPSQIPKEIRAGDSLCEGVVHVVYYQRDEHIWPLVEVKLSEIVANGGTGK 712 Query: 561 ERILILARYHHM---RPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGF 617 + + ILARY+ + +P L K + +L I MTIH SKG +ADYVI++G+ G F Sbjct: 713 KSVYILARYNSLCLPQPQLL-KWRESYSELDIQCMTIHKSKGLEADYVIVLGMNSGRHSF 771 Query: 618 PAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFVE 671 P + + + ++P VE F AEERRL YVALTRA+ ++ L + PS F++ Sbjct: 772 PCEIEDDPILKLVMPRVEPFEFAEERRLFYVALTRAKRKIILLAQHDRPSRFIK 825 Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 53/158 (33%), Positives = 80/158 (50%), Gaps = 18/158 (11%) Query: 172 QHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAG 231 +HN+ + + ADFF +VE +PL Q RA + E L++A AG GKTS +V + G Sbjct: 149 EHNEEFIKQERIHQADFFERVEKNPLTNEQRRAAIVMEDHHLLIASAGCGKTSAIVGKIG 208 Query: 232 WLLARGEASPEQILLLAFGRKAAEEMDERIRER---LHTEDITARTFHALALHIIQQGSK 288 + L + +P QI+ LAF + AA E+ +RI ER L+ +I TFHAL L I + Sbjct: 209 YALKKNFCAPSQIVTLAFNKNAANELRQRINERLGDLNGHEIKVETFHALGLQFISEAKG 268 Query: 289 KVP---------------IVSKLENDTAARHELFIAEW 311 P +V +L ++ + F+A W Sbjct: 269 IKPRVADWAVNLGENPGQVVERLVSELCKANPSFVAHW 306 >UniRef50_UPI000179C790 UPI000179C790 related cluster n=3 Tax=Bos taurus RepID=UPI000179C790 Length = 710 Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 118/320 (36%), Positives = 174/320 (54%), Gaps = 16/320 (5%) Query: 359 WVSLMRMHGGAQAEMIAS--APEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIH 416 +VS + + QA IAS A + S ++L + + + + LK DF L+ Sbjct: 338 YVSFLSHYKSNQAN-IASLLAKPSLSQRESLFLQLFSKVYQRYDQLLKTSKEHDFDDLLI 396 Query: 417 QAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFS 476 ++ ++ + ++ SP+K I+VDEFQD S RA L+ +L Q + LF VGDDWQAIYRF+ Sbjct: 397 ESAQLINENKYKSPFKLIIVDEFQDTSQARARLILSLLNQAPEAKLFCVGDDWQAIYRFA 456 Query: 477 GAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKK 536 G+ +S+ T F FG ++ L T+R N I VA+ FIQ+N QL+K +N++ K Sbjct: 457 GSDISIFTQFERVFGYTKQTKLTQTFRSNQGIANVASGFIQKNKSQLQKVVNAIDKTTSK 516 Query: 537 AV--TLLDESQ--LDALLDKLSGYAKPEERILILARY-HHMRPASLEKAATRWPKLQIDF 591 V L ++Q + L + + ++ I IL RY HH + T +F Sbjct: 517 VVEINFLTKAQEINEYLTRTIIASSGKKKSIYILGRYKHHKLFLPFLRNCT------FEF 570 Query: 592 MTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALT 651 TIH+SKG QADYVI++GL G FPA + + +LP E AEERRL YVALT Sbjct: 571 KTIHSSKGLQADYVILLGLNSGGSAFPAEKEDDPLLNLVLPQPEIHDFAEERRLFYVALT 630 Query: 652 RARHRVWALFNKENPSPFVE 671 RA+ +V+ + E S F+E Sbjct: 631 RAKEKVYLI--GERGSIFLE 648 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 68/214 (31%), Positives = 105/214 (49%), Gaps = 19/214 (8%) Query: 174 NQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWL 233 N+ + E+ L + FF QVES+PL Q + + E L++A AGSGKTS +V + G+ Sbjct: 5 NKRFVESELKTFKKFFDQVESTPLTDEQRVSSIIFEDRNLLVAAAGSGKTSTIVGKVGYA 64 Query: 234 LARGEASPEQILLLAFGRKAAEEMDERIRERL------HTEDITARTFHALALHIIQQGS 287 L G PE+IL+LAF + A EE+ ERI RL + A FH + +I + + Sbjct: 65 LLTGLYKPEEILVLAFNKNAGEELSERISFRLKDILSNFDTSVEALNFHKFGVKVIGKAT 124 Query: 288 KKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQ-WSVPEGNFWDDE 346 K P VS ND A + + + +Q E + +G +L + ++ N W E Sbjct: 125 GKSPSVS---ND-AGKPQALLNRIIQQLIETDSDFQGKTAYLRAPLSPFAFKTRNDW--E 178 Query: 347 KLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEE 380 K Q+R DR+ + Q E++ S E+ Sbjct: 179 KAQKR---SFDRFKDGFETY---QGEIVKSHGEK 206 >UniRef50_UPI0000E88005 helicase IV n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E88005 Length = 955 Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 100/278 (35%), Positives = 158/278 (56%), Gaps = 6/278 (2%) Query: 389 IKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAA 448 + L L + ++ LK N +DF +I++A ++ + +K+ILVDEFQDIS RA Sbjct: 544 LDLFQELFQLYEEELKRLNEIDFHDMINEANEVILNTNCYTNFKYILVDEFQDISFGRAK 603 Query: 449 LLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRI 508 L+ L+K + L +VGDDWQ+IYRF+GA + L T F + FG + L T+RFNS I Sbjct: 604 LITNLQKNYPRIKLLSVGDDWQSIYRFTGADIDLMTNFKKYFGYTNQLFLTKTFRFNSSI 663 Query: 509 GEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQ-----LDALLDKLSGYAKPEERI 563 +VA++FI++N Q+ K + + + V L ++ L+ ++ ++S ++ Sbjct: 664 EKVASQFIRKNSKQIDKEIKAHNISNSPNVKLFYPNKKSGKFLENIVREISLNCSKHSKV 723 Query: 564 LILARYHHMRPASLEKAATRW-PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAAR 622 L L R +H +A PKL +F T+H +KG +ADYV+I+ L+ +GFP Sbjct: 724 LFLGRNNHNEEGVDYRALKAIAPKLIFEFRTVHRAKGYEADYVVILDLKRARNGFPNEMV 783 Query: 623 ESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWAL 660 + + +L E + AEERRL YVALTRA+H V+ + Sbjct: 784 DDPIINIMLSENEAYNHAEERRLFYVALTRAKHLVYVI 821 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 81/312 (25%), Positives = 144/312 (46%), Gaps = 44/312 (14%) Query: 1 MELKATTLGKRLAQHPYDR--AVILNAGIKVSGDRHEYLIPFNQLLAIHCKRGLVWGELE 58 +++K + K + P++ V+ + I+ S + F + I+ +GLVW + Sbjct: 2 LKIKPSFFSKIFSPFPHNNYSCVLNDYQIEYSAVTQDSQYSFLAIKNINVHKGLVWSRVH 61 Query: 59 FVLPDEKVVRLHGTE---------WGETQRFYHHLDAHWRRWSGEMSEIASG-VLRQQLD 108 D + +L G + E ++ Y + GE +I V R + Sbjct: 62 IDFKDNQSFQLTGLNNNMAKELVLFAEKKKDYINKIIKQIEEHGEQIKIDGNWVARAKEG 121 Query: 109 LI-ATRTGENKWLTREQTSGVQQQIRQALSALPLPVNR--------LEEFDNCREAWRK- 158 L + +N+ L ++ G + I + LS +P+ + +E F+N E +++ Sbjct: 122 LFWVSEFDKNETL---KSIGSYRNILE-LSFTKIPLAKATIKSLLLIEGFNNNPEGFKEG 177 Query: 159 CQAWLKDIESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGA 218 C N + L Y FF ++ES+PL Q +A+++ E S LV+A A Sbjct: 178 C--------------NNVFIPEELARYKVFFDKIESNPLTEEQRKAIISDEDSTLVIASA 223 Query: 219 GSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRE-RLHTEDITARTFHA 277 GSGKTS+LV + +L+ +G A+ +QIL+LAF A EE+ R++E ++ E TFH+ Sbjct: 224 GSGKTSLLVGKVNYLIEKGFATEDQILVLAFNNNAKEEIATRLKEIKIVCE---THTFHS 280 Query: 278 LALHIIQQGSKK 289 L + + KK Sbjct: 281 FGLKVSAKAHKK 292 >UniRef50_B4SNF4 UvrD/REP helicase n=2 Tax=Stenotrophomonas maltophilia RepID=B4SNF4_STRM5 Length = 917 Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 114/331 (34%), Positives = 175/331 (52%), Gaps = 25/331 (7%) Query: 372 EMIASAPEEIRDLFSKR----IKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRF 427 +M A + D F +R +++ P+ +AW AL E +DF +++ A +LE+GR+ Sbjct: 540 DMAARLRQMPEDQFKERHRRFLEIAGPVFQAWDNALADERGIDFEDMLNMAAGLLEQGRY 599 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 SP+ ++ DEFQD S RA L AL Q + LFAVGDDWQ+I RF+GA +S+ T F Sbjct: 600 ESPYDLVMADEFQDASRARARLCRALVSQPGRH-LFAVGDDWQSINRFAGADVSVMTGFR 658 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLD 547 E G G+ L+ T+R + +V+ RFI +NP Q+ K + S + ++ + Sbjct: 659 EWMGHGQVLKLEQTFRCPQALCDVSGRFISRNPAQITKEVRSAAPAMGPVLQAFQMNRRE 718 Query: 548 ALLDKLSGY-----------AKPEER-----ILILARYHHMRPASLEKAATRW-PKLQID 590 + D + Y A P+ R + IL RY R A T + ++++ Sbjct: 719 EVQDGVRQYLAKLHQQLLSGAVPQGRNGRVTVFILGRYRADRSAMPSDWKTAFGSTMEVE 778 Query: 591 FMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVAL 650 F+T H SKG++ADYVI+ G+ S FP+ + +P + +P +EERRL YVAL Sbjct: 779 FLTAHRSKGREADYVILPGMINRS--FPSLRADDPALSLAMPDGDTYPLSEERRLFYVAL 836 Query: 651 TRARHRVWALFNKENPSPFV-EILKNLDVPV 680 TRAR V + SPF+ E++K+ V V Sbjct: 837 TRARRSVSMFTLQGKRSPFLDELVKDGAVKV 867 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 71/208 (34%), Positives = 104/208 (50%), Gaps = 21/208 (10%) Query: 109 LIATRTGENKWLTREQTSGVQQQIRQALSALPLPVNRLEEF------------DNCREAW 156 LI + +W+T EQ QQ + LPLP LE+ + R A Sbjct: 117 LIDRGSTGRRWITHEQ----QQALLAGRPGLPLPQRELEQLFLDEDVHEDLHSPSHRVAL 172 Query: 157 RKCQAWLKDIESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLA 216 W D +A N DF +VES PL QARAV+ ++ + V+A Sbjct: 173 DALHDWQLDWPTAWADANATMAARERVLAKDFLDRVESKPLTDEQARAVICFDNRVQVVA 232 Query: 217 GAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIR---ERLHTED--IT 271 AGSGKTS +VA+A + + RG PE+I++LAF + AA E++ER + +RL D + Sbjct: 233 SAGSGKTSTMVAKAAYAIDRGFVEPERIVMLAFNKDAARELEERAQRCFDRLGMGDTVVE 292 Query: 272 ARTFHALALHIIQQGSKKVPIVSKLEND 299 ARTFHAL L I+ + + + P +++ D Sbjct: 293 ARTFHALGLAIVAKATGRKPDIAEWTTD 320 >UniRef50_B8L506 UvrD/REP helicase n=2 Tax=Bacteria RepID=B8L506_9GAMM Length = 924 Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 105/303 (34%), Positives = 167/303 (55%), Gaps = 22/303 (7%) Query: 378 PEE-IRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILV 436 PE+ ++ + + +++ P+ +AW AL E +DF +++ A +LE+G + SP+ +L Sbjct: 556 PEDHFKERYRRFLEIAGPVFQAWDDALADERGIDFEDMLNMAAGLLEQGHYASPYDLVLA 615 Query: 437 DEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERC 496 DEFQD S RA L AL Q + LFAVGDDWQ+I RF+GA +S+ T F E G G+ Sbjct: 616 DEFQDASRARARLCRALVSQPGRH-LFAVGDDWQSINRFAGADVSVMTGFREWMGHGQVL 674 Query: 497 DLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGY 556 L+ T+R + ++++RFI +NP Q+ K + S + ++ + + D + Y Sbjct: 675 KLEQTFRCPQALCDISSRFISRNPAQIAKAVRSAAPSMGPVLQAFQMTRREEVQDGVRQY 734 Query: 557 -----------AKPEER-----ILILARYHHMRPASLEKAATRW-PKLQIDFMTIHASKG 599 A P+ R + IL RY R A + T + + ++F+T H SKG Sbjct: 735 LAKLHQQLLSGAVPQGRNGRVTVFILGRYQADRSAVPAEWRTSFGSTMDVEFLTAHRSKG 794 Query: 600 QQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWA 659 ++ADYVI+ G+ + GFP+ + + +P + +P +EERRL YVALTRAR V A Sbjct: 795 READYVILPGMV--NRGFPSLRSDDPVLSLAMPDGDTYPLSEERRLFYVALTRARRSV-A 851 Query: 660 LFN 662 +F Sbjct: 852 MFT 854 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 71/193 (36%), Positives = 101/193 (52%), Gaps = 21/193 (10%) Query: 118 KWLTREQTSGVQQQIRQALSALPLPVNRLEEF-------DNCRE-----AWRKCQAWLKD 165 +W+T EQ QQ + ALPL + LE D+ R A W D Sbjct: 133 RWITHEQ----QQALLADRPALPLSPDELERLFLDASVHDDLRSSHHLAALEALNDWHLD 188 Query: 166 IESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSV 225 + + N A L DF +VES PL QARAV+ ++ + V+A AGSGKTS Sbjct: 189 WPAVWAEANDAMATRELVLAKDFLDRVESRPLTEEQARAVICFDNRVQVVASAGSGKTST 248 Query: 226 LVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIR---ERLHTED--ITARTFHALAL 280 +VA+A + + RG PE+I++LAF + AA E++ER + +RL D + ARTFHAL L Sbjct: 249 MVAKAAYAIDRGFVEPERIVMLAFNKDAARELEERAQRCFDRLGMGDTVVEARTFHALGL 308 Query: 281 HIIQQGSKKVPIV 293 II + + + P + Sbjct: 309 AIIGKATGRKPDI 321 >UniRef50_C5A9C5 UvrD/REP helicase n=2 Tax=Proteobacteria RepID=C5A9C5_BURGB Length = 945 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 109/317 (34%), Positives = 165/317 (52%), Gaps = 29/317 (9%) Query: 383 DLFSKRIKLM----APLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDE 438 D F R ++ P++KAW AL AE+ +DF +++ A LE GR+ +P++ ++ DE Sbjct: 550 DAFKYRYRMFLDIAEPIIKAWDAALAAEDGIDFEDMLNLAAEHLESGRYEAPYELVMADE 609 Query: 439 FQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDL 498 FQD S RA L AL Q LFAVGDDWQ+I RF+GA +S+ T F E FG G+ L Sbjct: 610 FQDASRARARLCRAL-VQKPGRYLFAVGDDWQSINRFAGADVSVMTGFREWFGHGQVLKL 668 Query: 499 DTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKL----- 553 + T+R + +V++RF+ +NP Q+ K + S+ + + L D + Sbjct: 669 EQTFRCPQALCDVSSRFVSKNPTQISKRVTSVAPAIGPVLQAFQVDNKEKLADAIDQFVM 728 Query: 554 -------SGYAKP----EERILILARYHHMR---PASLEKAATRWPKLQIDFMTIHASKG 599 G P + + +L RY+ R PA+ + RW + + F+T+H SKG Sbjct: 729 KLAHGVQDGSIPPGHDGKVSVFVLGRYNADRQYVPANKAR-FERW--VDVSFLTVHRSKG 785 Query: 600 QQADYVIIVGLQEGSDG--FPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRV 657 +ADYVI+ + G FP + + +P +++PD EERRL YVALTRAR V Sbjct: 786 SEADYVILPEMLSVMRGRSFPNTRADDPVLALAMPAGDNYPDGEERRLFYVALTRARRSV 845 Query: 658 WALFNKENPSPFVEILK 674 + S F+ L+ Sbjct: 846 AMFTARGQRSSFLRELE 862 Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 83/134 (61%), Gaps = 5/134 (3%) Query: 174 NQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWL 233 N A+TE L D F +VE PL QARAV+ ++ + V+A AGSGKTS +VA+A + Sbjct: 189 NVAHTERELKACKDLFDRVERKPLTEEQARAVICFDNRVQVVASAGSGKTSTMVAKAAYA 248 Query: 234 LARGEASPEQILLLAFGRKAAEEMDERIR---ERLHTEDIT--ARTFHALALHIIQQGSK 288 + RG +P++I++LAF ++AA+E+ +R ERL ++ A TFHAL L II + +K Sbjct: 249 IDRGFVAPKRIVMLAFNKQAADELADRAAKSFERLAMSNVAVEASTFHALGLRIIGKATK 308 Query: 289 KVPIVSKLENDTAA 302 + P V DTA Sbjct: 309 EKPDVPDWATDTAG 322 >UniRef50_UPI0001BCB37F UvrD/REP helicase n=1 Tax=Fusobacterium periodonticum ATCC 33693 RepID=UPI0001BCB37F Length = 1017 Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 103/319 (32%), Positives = 164/319 (51%), Gaps = 47/319 (14%) Query: 389 IKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG------RFISPWKHILVDEFQDI 442 K+ P+L+ + +L +DFS +I++AI L K +K+I++DEFQD Sbjct: 612 FKMFKPILEFYNNSLNKNKEIDFSDMINKAIDHLNKKTKKEVFELGLRYKYIIIDEFQDT 671 Query: 443 SPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTY 502 S R L+ A+R + + AVGDDWQ+IYRF+G+ +S+ T F + FG+ E ++ TY Sbjct: 672 SVARFKLVKAIRDKIDDCKVLAVGDDWQSIYRFAGSDISIFTEFEKYFGKTEINFIEKTY 731 Query: 503 RFNSRIGEVANRFIQQNPGQLKKPLNS-----------LTNGDKKAVTLLDESQLDALLD 551 R + + +A F+ NP Q+KK LNS TN D K + + ++ Sbjct: 732 RNSQELVNIAQNFVMSNPNQIKKNLNSDKRLEIPIIYEKTNSDNKNFIIYN------IIK 785 Query: 552 KLS-GYAKPEERILILARYHHMRPASLEKAATRWPKLQ-------------------IDF 591 LS Y + E + ILAR + ++LEK + + K++ +D Sbjct: 786 SLSEEYGEKECSVTILARIN----SNLEKLNSEFFKVENKDDKFKISFKKNKLKNINLDC 841 Query: 592 MTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALT 651 T+H SKG +AD VI++ + + GFP + + +L + + EERRL YVALT Sbjct: 842 KTVHTSKGLEADEVILIDVNDNIVGFPNKILDDSVLFYVLSKSDSYLYGEERRLFYVALT 901 Query: 652 RARHRVWALFNKENPSPFV 670 R R+R + LF++ PS F+ Sbjct: 902 RTRNRTFILFDENYPSIFI 920 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 45/117 (38%), Positives = 70/117 (59%), Gaps = 1/117 (0%) Query: 166 IESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSV 225 +E ++ N+ Y + L DFF ++ L+ Q +++V E + L++AGAGSGKT Sbjct: 126 LEKDVIELNKKYVKKELEINKDFFSNIDGKSLDEQQRKSIVIDEDNNLIIAGAGSGKTLT 185 Query: 226 LVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHI 282 + + +L+ R + P++ILLL F R AA EM ERI+E+L +I A TFH+L I Sbjct: 186 ISGKVKYLVERKKIKPDEILLLTFTRAAANEMTERIKEKLKI-NIEASTFHSLGNKI 241 >UniRef50_C6AVQ0 UvrD/REP helicase n=2 Tax=Alphaproteobacteria RepID=C6AVQ0_RHILS Length = 972 Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 110/303 (36%), Positives = 170/303 (56%), Gaps = 19/303 (6%) Query: 389 IKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAA 448 + + AP+ + ++ LK +DF +I +A +E ++ SP++HILVDEFQDIS R Sbjct: 551 LSVFAPVFEEYEKRLKGR--IDFEDMILRAAQYVEARQYHSPFRHILVDEFQDISQSRGR 608 Query: 449 LLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFG---EGE-----RCDLDT 500 L+ AL+ Q+ +FAVGDDWQ+I+RF+G+ + L F + FG +GE DL Sbjct: 609 LVKALKVQHPDVRIFAVGDDWQSIFRFAGSDIHLMRNFGDEFGGSFDGETGVHRTVDLGR 668 Query: 501 TYRFNSRIGEVANRFIQQNPGQLKK---PLNSLTNGDKKAVTLL---DESQLDALLDKLS 554 T+R +I A F+ +NP Q++K P + T K V D +L +L +S Sbjct: 669 TFRSVDQIAFAARTFVLKNPAQIEKQIVPAGTATEPSIKIVAAAAGDDGRRLFEILASIS 728 Query: 555 GYAKPEE--RILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQE 612 + +L+L RY + P + R+P+L+I F TIH+SKG +AD+V+++ Sbjct: 729 TGCGVGDTASVLLLGRYRFLEP-DMRGIQRRFPQLRISFKTIHSSKGLEADHVVLLKADS 787 Query: 613 GSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFVEI 672 G GFP+ A + + + P E F +AEERR+MYVA+TRAR + L + PS FV Sbjct: 788 GRMGFPSEAVDDALLSLVSPEEESFENAEERRVMYVAMTRARRTLTILASASRPSSFVTE 847 Query: 673 LKN 675 L++ Sbjct: 848 LRS 850 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 65/141 (46%), Positives = 83/141 (58%), Gaps = 1/141 (0%) Query: 162 WLKDIESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSG 221 ++ D +AR + EA L + DFF +ES PL P Q +VV E + LVLAGAGSG Sbjct: 167 FVADPRTARELAVSKFVEAELETWKDFFDTIESKPLTPEQRLSVVVDEDATLVLAGAGSG 226 Query: 222 KTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALH 281 KTSV+ A+A +L G PE+ILLLAF + AAEEM ER+ R + ARTFHALA Sbjct: 227 KTSVITAKASYLAKAGIRQPEEILLLAFAKNAAEEMSERVEARSGVP-LVARTFHALAYD 285 Query: 282 IIQQGSKKVPIVSKLENDTAA 302 II + P ++ D AA Sbjct: 286 IIGEVEGSKPALANHATDDAA 306 >UniRef50_C4L6T7 UvrD/REP helicase n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L6T7_EXISA Length = 964 Score = 167 bits (424), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 104/329 (31%), Positives = 175/329 (53%), Gaps = 37/329 (11%) Query: 382 RDLFSKR-----IKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILV 436 +DLF + +L+ P+ + ++ L+ N +DF+ +I++A I+ +K+I++ Sbjct: 534 KDLFHYQRALLFFRLVKPMYRMYEDHLRRTNKIDFNDMINEATSIVSSDAVHLSYKYIII 593 Query: 437 DEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERC 496 DE+QDIS R L+ A+R Q + +T+ VGDDWQ+IYRF+G+ +SL T F FG+ Sbjct: 594 DEYQDISVSRYRLIEAIR-QKTGSTVMCVGDDWQSIYRFAGSDLSLFTDFEHYFGKSALL 652 Query: 497 DLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD----------ESQL 546 ++ TYR + ++ ++A RF+ +N Q++K L+S K+ +T + E L Sbjct: 653 KIENTYRNSQQLIDIAGRFVMKNKRQIRKNLSS----GKRLITPVRVMGIKGKNDFEIAL 708 Query: 547 DALLDKLSGYAKPEERILILARYHHMRPASLEKAAT---------------RWPKLQIDF 591 LD++ PE +L++ R ++ S+E +A+ P L+I F Sbjct: 709 RRALDQIVQSHGPESDVLLVGR-NNFDIKSIEGSASFRVKHLKDEVQVTDRTHPNLRISF 767 Query: 592 MTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALT 651 +T H SKG +A+ VI++ +GFP + + +L E+ EERRL YVALT Sbjct: 768 LTAHRSKGLEAENVILINTANSKNGFPNKIMDDPLLSFVLEKQEELEFGEERRLFYVALT 827 Query: 652 RARHRVWALFNKENPSPFV-EILKNLDVP 679 R +H + L + S FV E++K VP Sbjct: 828 RTKHTTYVLTPDDRMSTFVQELIKEQQVP 856 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 51/120 (42%), Positives = 73/120 (60%), Gaps = 1/120 (0%) Query: 174 NQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWL 233 N+ Y L FF ++ L+ Q RAV+ E + LV+AGAGSGKT + A+ +L Sbjct: 153 NETYVTEELKRTQSFFDSIDGKSLDGQQRRAVIVNEDANLVVAGAGSGKTLTIAAKVKYL 212 Query: 234 LARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIV 293 + R + P +ILL++F +K+AEEM ERI ERLH + +TFH L + II +G K+ P V Sbjct: 213 VERKQVQPHEILLISFTKKSAEEMKERICERLHIP-VEVKTFHGLGMGIIAEGRKQKPQV 271 >UniRef50_UPI00017C3C60 PREDICTED: hypothetical protein n=1 Tax=Bos taurus RepID=UPI00017C3C60 Length = 819 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 110/315 (34%), Positives = 160/315 (50%), Gaps = 49/315 (15%) Query: 359 WVSLMRMHGGAQAEMIAS--APEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIH 416 +VS + + QA IAS A + S ++L + + + + LK DF L+ Sbjct: 483 YVSFLSHYKSNQAN-IASLLAKPSLSQRESLFLQLFSKVYQRYDQLLKTSKEHDFDDLLI 541 Query: 417 QAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFS 476 ++ ++ + ++ SP+K I+VDEFQD S RA L+ +L Q + LF VGDDWQAIYRF+ Sbjct: 542 ESAQLINENKYKSPFKLIIVDEFQDTSQARARLILSLLNQAPEAKLFCVGDDWQAIYRFA 601 Query: 477 GAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKK 536 G+ +S+ T F FG ++ L T+R N I VA+ FIQ+N QL+K +N++ DK Sbjct: 602 GSDISIFTQFERVFGYTKQTKLTQTFRSNQGIANVASGFIQKNKSQLQKVVNAI---DKT 658 Query: 537 AVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHA 596 + L +R + E F TIH+ Sbjct: 659 TIFL-----------------------------PFLRNCTFE------------FKTIHS 677 Query: 597 SKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHR 656 SKG QADYVI++GL G FPA + + +LP E AEERRL YVALTRA+ + Sbjct: 678 SKGLQADYVILLGLNSGGSAFPAEKEDDPLLNLVLPQPEIHDFAEERRLFYVALTRAKEK 737 Query: 657 VWALFNKENPSPFVE 671 V+ + E S F+E Sbjct: 738 VYLI--GERGSIFLE 750 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 49/127 (38%), Positives = 70/127 (55%), Gaps = 6/127 (4%) Query: 174 NQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWL 233 N+ + E+ L + FF QVES+PL Q + + E L++A AGSGKTS +V + G+ Sbjct: 184 NKRFVESELKTFKKFFDQVESTPLTDEQRVSSIIFEDRNLLVAAAGSGKTSTIVGKVGYA 243 Query: 234 LARGEASPEQILLLAFGRKAAEEMDERIRERL------HTEDITARTFHALALHIIQQGS 287 L G PE+IL+LAF + A EE+ ERI RL + A FH + +I + + Sbjct: 244 LLTGLYKPEEILVLAFNKNAGEELSERISFRLKDILSNFDTSVEALNFHKFGVKVIGKAT 303 Query: 288 KKVPIVS 294 K P VS Sbjct: 304 GKSPSVS 310 >UniRef50_A1VWJ4 UvrD/REP helicase n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VWJ4_POLNA Length = 914 Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 100/295 (33%), Positives = 163/295 (55%), Gaps = 15/295 (5%) Query: 389 IKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAA 448 + L+ + W+ L + +DF +++ A +E+G++ SP++ ++VDEFQD S RA Sbjct: 559 LGLLEKIWTQWEAQLTKDKCIDFDDMLNLATDCVEQGKWKSPYELVMVDEFQDASQARAR 618 Query: 449 LLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRI 508 L+A L LFAVGDDWQ+I RF+GA +++ T F +G L+TT+R + Sbjct: 619 LVAGL-VSGPDKCLFAVGDDWQSINRFAGADLAVMTDFERRYGSAVTLKLETTFRCPQSL 677 Query: 509 GEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL---DESQLDALLDKLSGYAKPEE---- 561 ++++ F+Q+NP QL+K + S + V ++ DE Q+ A + G E Sbjct: 678 CDISSAFVQKNPKQLRKAVRSSKPNLAEPVLIIRVDDERQIRAAVQMRLGEISRENATVG 737 Query: 562 ---RILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFP 618 ++L+L RY + A L A L++DF+T+H+SKG +AD++I+ + + GFP Sbjct: 738 RKPKVLMLGRYQKDK-AYLPYAND---ALELDFITVHSSKGLEADHIILPRMTSETMGFP 793 Query: 619 AAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFVEIL 673 + + + +P + F +AEERRL YVALTRAR V + S FV+ L Sbjct: 794 SQIADDPVLLLAMPGGDAFENAEERRLFYVALTRARATVTLITITLKESAFVKEL 848 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 63/182 (34%), Positives = 93/182 (51%), Gaps = 12/182 (6%) Query: 119 WLTRE----QTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHN 174 WLT E Q G + + LS P N +E+ + + W D N Sbjct: 133 WLTHEFVQRQNEGKPTGLSKYLST-PEVANHVEK--QSAQFHADLKFWKHDFSIFAKGVN 189 Query: 175 QAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLL 234 + + L +FF VE SPL QA+AVV ++ +L++A AGSGKTS +VA+AG+ L Sbjct: 190 ERHLAKELIGSKEFFDSVEKSPLTDEQAKAVVCFDNRVLLVASAGSGKTSTMVAKAGYAL 249 Query: 235 ARGEASPEQILLLAFGRKAAEEMDERIRERLH-----TEDITARTFHALALHIIQQGSKK 289 G +++LLLAF AA E+ +RI++RL + + A+TFHA L +I + K Sbjct: 250 KMGYCEADRMLLLAFNNDAAAELRQRIQDRLGPLGLPADKVVAKTFHAFGLDVIGLATGK 309 Query: 290 VP 291 P Sbjct: 310 RP 311 >UniRef50_Q9PKH5 UvrD/REP helicase family protein n=5 Tax=Bacteria RepID=Q9PKH5_CHLMU Length = 890 Score = 161 bits (408), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 108/354 (30%), Positives = 185/354 (52%), Gaps = 22/354 (6%) Query: 349 QRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRI--KLMAPLLKAWKGALKAE 406 ++ L + R++SLM+ + + +++ A + +D+ S + K+ P+ + + L Sbjct: 457 EKALIKLIVRFISLMKSNHKSIKKVLYCA-KIAKDIPSSWLIEKVFKPVYERYVDTLAKR 515 Query: 407 NAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVG 466 +DF+ I QA I + +I+VDEFQDIS L LRK N ++ VG Sbjct: 516 GQIDFTDAILQATEICRHSS-SGKYDYIIVDEFQDISIDCCRFLQELRKGNPPAKMYCVG 574 Query: 467 DDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKP 526 DDWQ+IYRF+G+ +++ F + FG E L+TTYR + +++ F+Q+N Q++K Sbjct: 575 DDWQSIYRFAGSNITVFNQFSDYFGPQEIHRLETTYRLGEPLVSLSSSFVQRNNFQIRKD 634 Query: 527 LNSLTNGDKKAVTLL------DESQLDALLDKLSGYAKPEER-ILILAR-----YHHMRP 574 S N D + + E + L+ L PE++ I +L R Y+ + Sbjct: 635 CRSF-NPDIRTELVFRSYYHRSEKDYCSCLE-LEISKIPEDKSIFLLGRYSFDDYYLSKK 692 Query: 575 ASLEKAATRWPKL----QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEAL 630 L K + + + +I+F+T+H SKG +ADYVI++ GFP+ ++ + + Sbjct: 693 YQLVKTGSNFFYIIGNRKIEFLTVHKSKGLEADYVILLQCNADRYGFPSLVTDNKVFNYV 752 Query: 631 LPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFVEILKNLDVPVARKP 684 L + FP +EERRL YVA+TRA+ + L++K+ PS FV+ +D A+ P Sbjct: 753 LSESDSFPFSEERRLFYVAITRAKIKTTVLYDKKFPSEFVKEFIKVDEKRAQVP 806 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 41/125 (32%), Positives = 71/125 (56%), Gaps = 7/125 (5%) Query: 162 WLKDIESARL---QHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGA 218 +++D ES +HN +L Y DFF +V PL+ Q R++++ E + LV++ A Sbjct: 103 FIQDFESITTLIKKHNSEIISYLLDLYKDFFDRVLHYPLDEQQRRSIISEEENCLVISSA 162 Query: 219 GSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHAL 278 GSGKTS ++ + +L+ P +I L+++ KA+ E+ +RL T+ + TFH L Sbjct: 163 GSGKTSSILGKVRYLIEIKGIDPRRIALISYTNKASSELT----KRLATDGLRGYTFHKL 218 Query: 279 ALHII 283 A+ +I Sbjct: 219 AVDLI 223 >UniRef50_Q8PKB0 Helicase IV n=1 Tax=Xanthomonas axonopodis pv. citri RepID=Q8PKB0_XANAC Length = 939 Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 99/305 (32%), Positives = 162/305 (53%), Gaps = 24/305 (7%) Query: 389 IKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAA 448 +K+ P+ A++ AL+ +D++ ++ +A+ L GR +P++ +LVDEFQDI+ RA Sbjct: 569 LKVAFPVFHAYQQALRDAGKIDYADMLREALAALRDGRVKTPYRFVLVDEFQDIARLRAD 628 Query: 449 LLAALRKQNS-QTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGER-CDLDTTYRFNS 506 L+ ++ Q ++ +F VGDDWQ I RFSG+ + + +FG ER L T+R +S Sbjct: 629 LVKSVLDQAPYESIVFCVGDDWQTINRFSGSDVGIFKNIGNHFGRHERQLMLSRTFRCSS 688 Query: 507 RIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL------------DESQLDALLD--K 552 I +A + +N Q KP+ + + V ++ E+QL AL++ K Sbjct: 689 GIATLARELVLKNDNQFDKPVQARPDRLSHCVRVVLHKPGAEHRMPALETQLAALIETGK 748 Query: 553 LSGYAKPEERILILARYHHMRPASLEK-------AATRWPKLQIDFMTIHASKGQQADYV 605 G A P +IL P L+ A +L+++ M++H SKG +AD+V Sbjct: 749 DLGIALPSVQILARTTVKTTAPLGLDSKDAINALKARYTGQLEVEVMSLHGSKGLEADFV 808 Query: 606 IIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN 665 ++VG G GFP + + +LP + + EERRL+YV LTRA+H+V L N + Sbjct: 809 VLVGFDSGFRGFPDERAPEPLLDLVLPKLS-HENEEERRLLYVGLTRAKHQVIVLANGDA 867 Query: 666 PSPFV 670 PS +V Sbjct: 868 PSEYV 872 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 46/122 (37%), Positives = 73/122 (59%), Gaps = 5/122 (4%) Query: 167 ESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVL 226 E++R +HN+ Y + AD+F VESSPL P Q A + E + LV+A AGSGK+S + Sbjct: 142 EASRTEHNEQYLAYQIEAEADYFNAVESSPLTPEQTAAALVFEDATLVVAAAGSGKSSCI 201 Query: 227 VARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTE-----DITARTFHALALH 281 V + G+ L G +IL LA+ +KAA+ +DER+ ++L + ++TFH+ L Sbjct: 202 VGKIGFALKSGLFQDHEILALAYNKKAAKSLDERLSKKLSKAIGRKVAVASKTFHSFGLS 261 Query: 282 II 283 ++ Sbjct: 262 VM 263 >UniRef50_B4EEE2 Putative helicase n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4EEE2_BURCJ Length = 934 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 102/314 (32%), Positives = 158/314 (50%), Gaps = 32/314 (10%) Query: 389 IKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAA 448 ++++ P+ A LKA+ +D+ +I +A+ L + P++ IL DEFQD +P R Sbjct: 562 LQVVWPVAMAVNELLKADKCIDYDEMIRRALGYLHDRPDLLPYRFILADEFQDTAPGRGD 621 Query: 449 LLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGE----GERCDLDTTYRF 504 ++ + + FAVGDDWQAI RF+G+ + F F ++C L T+R Sbjct: 622 MIRKMLHAREDSLFFAVGDDWQAINRFAGSDLRFFREFGSMFNRRAAADKQCALTQTFRS 681 Query: 505 NSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAV---TLLDESQLDALLDK-LSGYAK-- 558 N I +V F+ +N Q+ K + + + + T E + +AL+++ L+ + Sbjct: 682 NQGIADVGRTFVLRNGSQMPKTVEAYDRTREAVIDVRTYKAEREPEALINEILTSWVSQH 741 Query: 559 PEER---ILILARYHHMRPASL---------EKAATRWPKLQID-------FMTIHASKG 599 P R + IL RY L EK A R L+ + T+H SKG Sbjct: 742 PPGRKPSVFILGRYGKYHAGGLTAQQLAELDEKWADRIELLKTKDKEPPSLYTTMHTSKG 801 Query: 600 QQADYVIIVGLQEGSDG---FPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHR 656 QADYV+IVG+ FP+ + + + +LPP E DA+ERRL YVALTRA+HR Sbjct: 802 LQADYVLIVGMYRAEHDFFCFPSEREDDPLLQLVLPPKEALSDADERRLFYVALTRAKHR 861 Query: 657 VWALFNKENPSPFV 670 V L ++ PSP+V Sbjct: 862 VALLTQQQYPSPYV 875 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 47/137 (34%), Positives = 63/137 (45%), Gaps = 23/137 (16%) Query: 172 QHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAG 231 Q N + E L + FF E L QARA + E + L++A AGSGKTS +V + Sbjct: 153 QRNDEFVERELERWRGFFAYCEERALTDEQARAAITFEENTLLIAAAGSGKTSTVVGKVA 212 Query: 232 WLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTE----------------------- 268 + L +G PE+IL LAF KAA E+ R RL Sbjct: 213 YALVKGIVRPEEILCLAFNGKAAAEIAVRTNARLRAMIADVCPIDPAIKNRVRVLVDSGV 272 Query: 269 DITARTFHALALHIIQQ 285 I +RTFH+L I++Q Sbjct: 273 RIESRTFHSLGRKIVEQ 289 >UniRef50_UPI000174264A helicase, UvrD/REP family protein n=2 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI000174264A Length = 692 Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 103/314 (32%), Positives = 169/314 (53%), Gaps = 37/314 (11%) Query: 394 PLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAAL 453 P+L+ + AL + + +DF+ +I+ A ++++ I + +I++DE+QDIS R L+ + Sbjct: 305 PILEKYNSALSSRSEIDFNDIINWAAKLVQQKGVIQDYDYIIIDEYQDISAARFKLITEI 364 Query: 454 RKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVAN 513 R+Q S L VGDDWQ+IYRF+G+ +SL + F + GE E ++ TYR + ++ +++ Sbjct: 365 RQQ-SGARLVCVGDDWQSIYRFTGSDISLFSDFGKFVGEHETLFIERTYRNSQQLIDISA 423 Query: 514 RFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDA---LLDKL----SGYAKPEERILIL 566 +FIQQNP QL K S D V + +Q +A L+D++ Y K ++RIL+L Sbjct: 424 KFIQQNPKQLAKNPKSTKELD-CPVEFMSYNQNNAFAVLVDQIRQITCNYGK-DKRILLL 481 Query: 567 ARYHH--------------MRPASLEKAATRWPK------------LQIDFMTIHASKGQ 600 R+ + L K ++ + + I F+T H SKG Sbjct: 482 GRHSFDLDYVICLRDDKGKVIKNQLRKEVKKYNEVTGELSIAGLEGVNITFITAHKSKGL 541 Query: 601 QADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWAL 660 +AD VI++ L+ GFP + + LL E AEERRL YVALTR +++V+ + Sbjct: 542 EADNVIVLNLKNDLYGFPNKLTDDPIISLLLSAPEACRFAEERRLFYVALTRTKNKVYLM 601 Query: 661 FNKENPSPFVEILK 674 + EN S F + +K Sbjct: 602 VS-ENESLFAKEIK 614 >UniRef50_C9RMS6 UvrD/REP helicase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RMS6_FIBSS Length = 744 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 149/516 (28%), Positives = 220/516 (42%), Gaps = 104/516 (20%) Query: 197 LNPAQARAVV-----NGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 LN Q AV+ NG+ LL+LAGAGSGKTSVL R + + G PE+IL L F Sbjct: 10 LNSDQRAAVLHDHEKNGQ--LLILAGAGSGKTSVLTKRIQYRIMSG-VEPEKILALTFTA 66 Query: 252 KAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 KAA EM ER+++ + TFH+LAL +++ KVP+ + AA Sbjct: 67 KAAAEMRERVQKLFPNAGVRLCTFHSLALFVLKS---KVPV--GYDEACAA--------- 112 Query: 312 RKQCSEKKA-QAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 CS A + G+++ +P D+ + LA R R Sbjct: 113 -GACSSCPAYELVGFKK---------MPVPTESADKTFMQELAKVGGRKFRFSR------ 156 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KG 425 E+ + A +K +K + PL + + V F LI+QAI +LE + Sbjct: 157 EELFSDAHP------AKLLKKLEPL----RHRILESGQVVFEDLIYQAINLLENHESARA 206 Query: 426 RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 F + W ILVDE+QDI+P + L+ AL + + +LF VGDD QAIY F GA + Sbjct: 207 YFQNQWTEILVDEYQDINPSQYRLVKALLGE--RKSLFVVGDDDQAIYGFRGADIGNINR 264 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDES- 544 F ++F E L+ YR + I +NR + P L+K L + + E+ Sbjct: 265 FRDDFKESSLIRLEWNYRSVANILHFSNRIFENKPIHLRKVLRAGNMNGSGGSPIFKENR 324 Query: 545 ------------QLDALLDKLS----GYAKPEERILILARYHH--------MRPASLEKA 580 ++ ++ + Y + IL RY+ +R A L A Sbjct: 325 EPEIWVSEDPVEEMQKIITSIKLLRESYDLQWKNFAILVRYNRQRLYYEEALRDAHLPIA 384 Query: 581 ATRWPKL------------QIDFMTIHASKGQQADYVIIVGLQEG-SDGFPAAARESIME 627 T + I T+HASKG Q V G+ EG + G +R+ + Sbjct: 385 GTVVSEAGNVEGEGEVLENGIHVETVHASKGLQYAVVYYAGMSEGLTPGSCLGSRKQRQK 444 Query: 628 EALLPPVEDFPDAEERRLMYVALTRARHRVWALFNK 663 + EERRL YV +TRA + L+ K Sbjct: 445 QL----------DEERRLFYVGVTRAESFLVLLYCK 470 >UniRef50_B7IZB5 Helicase, UvrD/Rep family n=5 Tax=Bacillus cereus group RepID=B7IZB5_BACC2 Length = 666 Score = 131 bits (330), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 112/415 (26%), Positives = 184/415 (44%), Gaps = 65/415 (15%) Query: 188 FFRQVESS--PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQIL 245 FFR +E LN +Q AV N ++ LAGAGSGKTSVL ++ G+++ E P I+ Sbjct: 50 FFRSLEKHGIKLNESQIEAVRNVSGPVITLAGAGSGKTSVLTSKVGYMMNYKEIKPANIM 109 Query: 246 LLAFGRKAAEEMDERIRER-----LHTEDITARTFHALALHIIQQGSKKVPIVSKLENDT 300 +L F +KAAEEM RI + A TFH++ L +I+ I+S Sbjct: 110 ILTFTKKAAEEMKSRISNLPGLSISGARQLLAGTFHSIFLRVIRNAGINQKIIS------ 163 Query: 301 AARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWV 360 +E+M+ + N D KL Sbjct: 164 -----------------------------SEKMKH-IAIKNILRDLKLADSYEPE----- 188 Query: 361 SLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIV 420 +++ M G + MI + + + + ++ + + + WK + +N +DF ++ Sbjct: 189 TIVSMIGYFKNHMIKPSDLPTKSVIDRELRDIYAMYEQWK---EQQNMIDFDDILVIMYD 245 Query: 421 ILEKGRFI-----SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRF 475 +L + K+ILVDEFQD S + A+L + ++ T+ VGDDWQ+IY F Sbjct: 246 LLTTNFKLRELIQEKIKYILVDEFQDSSSIQYAILQIIAAPHNNLTI--VGDDWQSIYAF 303 Query: 476 SGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTN-GD 534 GA + F ++ + ++ LDT YR N I + N I+QN Q K LN+ + G Sbjct: 304 RGANPGIILNFPNDYSKVKKVILDTNYRSNPYIVGLGNSIIKQNKKQFDKTLNTNKDSGS 363 Query: 535 KKAVTLLDESQLDA------LLDKLSGYAKPEERILILARYHHMRPASLEKAATR 583 K D+S+ +A ++ ++ G K IL R H + + +E+ + Sbjct: 364 KPKYFSPDDSKQEATMIINDIIGQIKGGNKNYRDFSILYRTHAVSRSLIEQLVIK 418 >UniRef50_Q8Q0V3 Superfamily I DNA and RNA helicase n=2 Tax=cellular organisms RepID=Q8Q0V3_METMA Length = 865 Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 101/320 (31%), Positives = 159/320 (49%), Gaps = 39/320 (12%) Query: 390 KLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR--FISPWKHILVDEFQDISPQRA 447 +++ + + ++ L+ EN +DF+ +I+ A+ L++ + + + + IL+DE+QDIS QR Sbjct: 542 RIVLDIYELYENELRTENRIDFADMINLAVKELKENQELYRNSFAQILIDEYQDISSQRY 601 Query: 448 ALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSR 507 L+ L K+N LF VGDDWQ+I FSG+ + FHE F R DL T YR Sbjct: 602 ELIRELMKKNDGCKLFCVGDDWQSIMGFSGSDLDFFVNFHEYFDHPARTDLSTNYRSCKS 661 Query: 508 IGEVANRFIQQN-PGQLKK----------PLNSLTNGDKKAVTLLDESQLDA-------- 548 I + I+ N Q++K P+ + + T + SQ+ + Sbjct: 662 IVDTGAEIIKYNRDSQIEKDTFAKNTTENPIRIYVSKHNRRSTNMYYSQIASHCVYSIKH 721 Query: 549 LLDKLSGYAKPEERILILARYH---HMRPASLEKAATRWPKLQID---------FMTIHA 596 LD GY +P++ IL+L+R M+ +E A T + D FMT+H Sbjct: 722 YLD--DGY-EPKD-ILLLSRIGKNLKMKNTLMEYAKTLDVPISFDGSKNPNKIPFMTVHK 777 Query: 597 SKGQQADYVIIVGLQEGSDGFPAAARE-SIMEEALLPPVEDFPDAEERRLMYVALTRARH 655 SKG QA V ++ + E GFP I E A+L D + EERRL YVA+TRA + Sbjct: 778 SKGLQAKAVFLLDVVEDLYGFPCEIENPDIFEPAILSRKRDRYE-EERRLFYVAVTRAMN 836 Query: 656 RVWALFNKENPSPFVEILKN 675 + K++ S F+ ++N Sbjct: 837 DLIIYTRKDSVSKFIHEIEN 856 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 47/118 (39%), Positives = 76/118 (64%), Gaps = 3/118 (2%) Query: 173 HNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGW 232 +N+ + + + +Y D+ Q S PL+ +Q RA+V + LV+AGAGSGKT VL+ R + Sbjct: 144 NNKEFIQQRIQKY-DYLFQKSSFPLDNSQKRAIVTDDTHNLVVAGAGSGKTEVLITRTAY 202 Query: 233 LLARG--EASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSK 288 L R + ++IL+LA+ KAAEE+ +R+++R E+ RTFH+L I+++GSK Sbjct: 203 LTERAPDKVDAKKILILAYQNKAAEEVKKRLKDRFSIEEAEVRTFHSLGKKILEEGSK 260 >UniRef50_Q5E4T7 Superfamily I DNA and RNA helicase n=1 Tax=Vibrio fischeri ES114 RepID=Q5E4T7_VIBF1 Length = 465 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 66/139 (47%), Positives = 93/139 (66%), Gaps = 4/139 (2%) Query: 165 DIESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTS 224 DIE R Q Y L +Y FF VES+PL Q A V + L+LAGAG+GKTS Sbjct: 162 DIEKIR----QRYVNKQLAQYQTFFDSVESNPLTNRQRIACVTDNDNNLLLAGAGTGKTS 217 Query: 225 VLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQ 284 V++ +AG+L+ G+ASP+QIL+LA+GR AA+EM+ERI+E+L +D+ A TFH+L + II Sbjct: 218 VMIGKAGYLVNSGKASPKQILMLAYGRIAAQEMNERIKEKLGFDDVKASTFHSLGVKIIS 277 Query: 285 QGSKKVPIVSKLENDTAAR 303 + K P +SKLE++ + Sbjct: 278 EVEGKAPSLSKLEDNPKVK 296 >UniRef50_C3WE38 UvrD/REP helicase n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WE38_FUSMR Length = 518 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 127/487 (26%), Positives = 221/487 (45%), Gaps = 85/487 (17%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 SS LN Q +A+++ E LV+AGAGSGKT +V R WL+ G S E+IL++ F RKA Sbjct: 64 SSLLNEEQKKALLSTEGQYLVIAGAGSGKTRTIVYRTAWLIENG-VSEEKILMVTFTRKA 122 Query: 254 AEEMDERIRERLHTEDI--TARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 +EEM ER++ L+ E++ TFH+ +I + + + + R ++ + Sbjct: 123 SEEMKERLKNILNVEELKTVVTTFHSFCARLIFKYKALFEVDNLNIMEEGEREKILL--- 179 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 + E+ K ++ G F+D E+L RL Sbjct: 180 --KIVERFELNKKYK-------------GKFYDIEELSNRL------------------- 205 Query: 372 EMIASAPEEIRDLFSKR-IKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-FIS 429 E + +A + D+F K I + + ++ K +N ++ L+ I ++ R F+ Sbjct: 206 EKLQNARLRLEDIFPKEHIDDIIKIKSEYRKYKKIKNVYEYDDLVEIVIKKFKENREFLK 265 Query: 430 PWK----HILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 + +I+VDE+QD + + LL L ++ L VGDD+Q+IY F GA + Sbjct: 266 IIRDKIDYIVVDEYQDSNLAQRELLKLLVGEDK--NLMVVGDDYQSIYGFRGADFTNILK 323 Query: 486 FHENFGEGERCDLDTTYRFNSRI----GEVANRF-IQQNPGQLKKPLNSLTNGDKKAVTL 540 F E+F + + L+ YR + I +AN F I+ N KK + G++ + Sbjct: 324 FGEDFPKAKLIKLEKNYRSSEEIIAYTNRIANNFKIKYN----KKIYGTGRRGERVHINS 379 Query: 541 LDESQLDA--LLDKLSGYAK--PEERILILARYHH----MRPASLEKAATRWPKLQ---- 588 + + + + +K+ Y + P E ++IL R + M +E + K Sbjct: 380 FKDEEKEGRYICEKILAYKEKFPFEEMVILFRNKYTVKVMEKLLMEYKIPYYKKEMEEKR 439 Query: 589 -IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 + ++H+SKG + + V I L +G FP++ + +E EE+RL Y Sbjct: 440 GVALYSLHSSKGLEWEIVFIPTLLDGV--FPSSIEKENLE-------------EEKRLYY 484 Query: 648 VALTRAR 654 V +RA+ Sbjct: 485 VGCSRAK 491 >UniRef50_UPI00019094F3 DNA helicase IV n=1 Tax=Rhizobium etli IE4771 RepID=UPI00019094F3 Length = 247 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 112/193 (58%), Gaps = 21/193 (10%) Query: 403 LKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTL 462 L+ +DF +I A+ +++ GR+ SP+ ILVDEFQDIS RA L+ AL++Q + + + Sbjct: 1 LEESQRIDFDSMIADAVRLVQTGRYQSPYSLILVDEFQDISEPRANLIKALKQQKAFSKM 60 Query: 463 FAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQ 522 FAVGDDWQ+IYRF+G+ +++ T F NFG + L+ TYR N I E A +F+Q+NP Q Sbjct: 61 FAVGDDWQSIYRFAGSDITIFTQFEANFGASWQGRLEQTYRCNQLIAETAAKFVQRNPEQ 120 Query: 523 LKKPLNSLTNGDKKAVTLLDES-----------------QLDALLDKLSGYAKPEE---- 561 + K ++S +++ ++ +LDA L+ ++ + Sbjct: 121 ITKSVHSTRAAVPRSIRVIPIDGKGGRPDFGLACHRILERLDAFLEDIASQWRSAPGTML 180 Query: 562 RILILARYHHMRP 574 +IL+L RY+H+ P Sbjct: 181 KILVLWRYNHVDP 193 >UniRef50_Q3IPC8 Probable helicase n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=Q3IPC8_NATPD Length = 1028 Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 102/331 (30%), Positives = 154/331 (46%), Gaps = 53/331 (16%) Query: 393 APLLKAWKGALKAENAVDFSGLIHQAIVILEKG--RFISPWKHILVDEFQDISPQRAALL 450 A +L+A+ L VDF +I++AI ++ + + + H+LVDEFQD+S + L+ Sbjct: 600 AFVLEAYNAYLDRAGLVDFDDMINEAIAAIQADPESYWAQFDHLLVDEFQDVSRHQLELI 659 Query: 451 AALRK-QNSQTT--LFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSR 507 A ++ Q T LF VGDDWQ+IY F GA + AF ENFG L YR Sbjct: 660 RAFTGGEDLQETPRLFCVGDDWQSIYSFQGADVDQFIAFEENFGPTAETRLTENYRNPVT 719 Query: 508 IGEVANRFIQQNPGQLKKPLNSLTNGD-KKAVTLLDESQLDALLDKLSGYAKP--EERI- 563 + E N I N Q+ K + + D + + +LD +A ++ YA E+R+ Sbjct: 720 VLEAGNDLIANNDHQIAKTVRAAAGHDCQPTLHVLDGYTENAYERRVGEYAANLVEQRLE 779 Query: 564 ----------LILARY-------------------------HHMRPASL--EKAATRWPK 586 ++L RY H RP + E P Sbjct: 780 KGIGTEPSDAMVLCRYDAGAPFTDRVKAELERRNIPYDGKDDHYRPEDMPDEYDPDFDPD 839 Query: 587 LQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDA---EER 643 + ++H +KG++A+ +I++ + G GFPA RE+ +L+ PV+D A EER Sbjct: 840 AGVAVYSVHQAKGREAEQLIVLNVVSGMYGFPADHREN----SLVAPVQDLETATVEEER 895 Query: 644 RLMYVALTRARHRVWALFNKENPSPFVEILK 674 RL YVALTRA + L E S F+E +K Sbjct: 896 RLFYVALTRAESEMHVLTRGEQWSLFIEEIK 926 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 84/176 (47%), Gaps = 6/176 (3%) Query: 117 NKWLTREQTSGVQQ---QIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQH 173 +++LTR + + + + QIR L L +N D R + L I + Sbjct: 171 DQYLTRPEQTEINERCRQIRDQLDRLRNELNLDLLADTDRHRLSDVETTLDAIIEHLQDY 230 Query: 174 NQAYTEAMLTEYADFFRQV--ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAG 231 N + + EY D F + E + LN AQ AVV + LV+A AG+GKT L R Sbjct: 231 NNEFVDRRCAEYDDLFSDIDEEGNDLNRAQREAVVTNDLRNLVVAAAGTGKTLALTYRVA 290 Query: 232 WLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGS 287 +L+A G P +I L + R+AA EM+ R+ E+ E RT H+ A I Q+ + Sbjct: 291 YLVAEG-VDPARIAALTYTRQAAREMELRLEEQFGIEQADVRTIHSFAYEIAQETA 345 >UniRef50_A5UN47 Helicase, UvrD/REP family n=1 Tax=Methanobrevibacter smithii ATCC 35061 RepID=A5UN47_METS3 Length = 661 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 94/336 (27%), Positives = 160/336 (47%), Gaps = 44/336 (13%) Query: 381 IRDLFSKR-----IKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHIL 435 ++D FSK +K++ + ++ L +DF+ +I++A + K P+K+I+ Sbjct: 152 LKDSFSKDRTIAFLKIVEEIYNDYEAYLLKIKKIDFNDMINKASDCIVKNGLDLPYKYII 211 Query: 436 VDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGER 495 VDE+QD S R LL + + + VGDDWQ+IY FSG +++ T F F E Sbjct: 212 VDEYQDTSFTRYNLLRNIC-DSIGAKIMVVGDDWQSIYSFSGCDVNIFTKFDNFFDVCET 270 Query: 496 CDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD-ESQLDALL---- 550 ++ TYR + ++ + ++ F+ +NP Q +K L S + K + L++ ++ D +L Sbjct: 271 RYIEKTYRNSQQLIDASSNFVMKNPDQTRKELKS-SKSLKYPIKLVNFDNDFDEILKFEL 329 Query: 551 ---DKLSGYAKPEERILILARYH----------------------------HMRPASLEK 579 + ++ ++ILIL R + +R K Sbjct: 330 IIKNIINQSTFKNKKILILGRNNKDIFNLLKNFNVENEYGKRKFEILGDEDKLRRNKFVK 389 Query: 580 AATR-WPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFP 638 R P + I++ T+H SKG + D VI++ L+ GFP + + + + F Sbjct: 390 IVYRESPDVNIEYRTVHQSKGLECDNVILINLKNWKAGFPNKMVDDPVLNFVKRNGDSFS 449 Query: 639 DAEERRLMYVALTRARHRVWALFNKENPSPFVEILK 674 AEERRL YVALTR ++ V+ L S FV+ LK Sbjct: 450 YAEERRLFYVALTRTKNNVYLLAPYFKSSVFVQELK 485 >UniRef50_UPI0001C3187F UvrD/REP helicase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3187F Length = 746 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 109/365 (29%), Positives = 174/365 (47%), Gaps = 56/365 (15%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AVV+GE LL+LAGAGSGKT VL R +L+ G+A P++IL + F KAA+E Sbjct: 17 LNEPQREAVVHGEGPLLILAGAGSGKTRVLTHRIAYLVGTGQARPDEILAITFTNKAAQE 76 Query: 257 MDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCS 316 M ER+ E + R A+ ++ + C+ Sbjct: 77 MRERV------EMLVGRRTRAM----------------------------WVMTFHSACA 102 Query: 317 EKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIAS 376 + +A R T Q+++ + + D +L +R LD V R GA I+ Sbjct: 103 -RMLRADAHRLGYTR--QFTIYDQS--DARRLVKRAIEELD--VDPKRFTPGAIHHEISD 155 Query: 377 APEEIRDL--FSKRI-----KLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----K 424 A ++RD +++ + + +A + K ++ L NA+DF L+ +A+ +LE + Sbjct: 156 AKNKLRDAEAYAQMVGSFFEQTVADVYKLYESELHRMNAMDFDDLLVRAVNVLELFPEVR 215 Query: 425 GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 R+ ++H+LVDE+QD + + L + ++ L VGDD Q+IY F GA + Sbjct: 216 RRYADNFRHVLVDEYQDTNHVQYRWLQLIAGEHRN--LAVVGDDSQSIYGFRGADIRNIL 273 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL-NSLTNGDKKAVTLLDE 543 F ++F + + L+ YR I + AN I+ N GQ +K L L GD V LD+ Sbjct: 274 DFEDDFPDAKVVKLEQNYRSTQTILDAANAVIRNNRGQREKELWTDLGIGDPIKVRELDD 333 Query: 544 SQLDA 548 +A Sbjct: 334 EHAEA 338 >UniRef50_UPI0001788A90 UvrD/REP helicase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788A90 Length = 822 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 114/358 (31%), Positives = 162/358 (45%), Gaps = 62/358 (17%) Query: 186 ADFFRQVESSPL--NPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQ 243 A FFR +ES L N AQ +AV + + LL LAGAGSGKTSVLV+R G+L+A P Sbjct: 40 AAFFRGLESQGLLLNRAQIQAVRHTQGPLLTLAGAGSGKTSVLVSRTGYLIAAKSVEPSS 99 Query: 244 ILLLAFGRKAAEEMDERIR-----ERLHTEDITARTFHALALHIIQQGSKKVPIVSKLEN 298 ILL+ F KAA EM ERI T +TARTFH+ L++++ K I+S Sbjct: 100 ILLVTFSSKAAAEMKERIMALPGLRSSETAKVTARTFHSFFLYLLRTRGYKQEILSN--- 156 Query: 299 DTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDR 358 ARH+ FI + + EM + ++ E L L Sbjct: 157 ---ARHQQFIM-----------------KRILREMGLQ----DSYEAETL-------LSL 185 Query: 359 WVSLMRMHGGAQAEMIASAPEEI--RDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIH 416 W S RM E+ P E+ R +F++ +AWK + +DF ++ Sbjct: 186 W-SAHRMSMTGLDELPVKTPAEVEQRQIFAR--------YEAWK---EEHGQMDFDDILV 233 Query: 417 QAIVILEKGRFI-----SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQA 471 + +L + S +++++VDEFQD LL + + L VGDD Q Sbjct: 234 LSYRLLSHDSGLLASLQSRYRYVMVDEFQDTGLLPYELLKKIVAPHR--NLMVVGDDDQT 291 Query: 472 IYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS 529 IY F+GA+ F + F + LD YR S I + N I+ N + K L S Sbjct: 292 IYGFNGARNEFILEFDQTFPGAKVVTLDINYRSLSSIVGLGNEIIRVNERRRPKQLRS 349 >UniRef50_C7NQZ8 UvrD/REP helicase n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NQZ8_HALUD Length = 916 Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 101/330 (30%), Positives = 148/330 (44%), Gaps = 49/330 (14%) Query: 395 LLKAWKGALKAENAVDFSGLIHQAIVIL--EKGRFISPWKHILVDEFQDISPQRAALLAA 452 LL+ ++ + VDF +I+ A+ + + RF S ++H+LVDEFQD++ + LL A Sbjct: 501 LLEEYEDWKRRNGLVDFDDMIYDAVAAVREDPDRFQSQFEHVLVDEFQDVAISQIRLLDA 560 Query: 453 LRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVA 512 L LF VGDDWQ+IY F GA + F E FG +L TYR + + E + Sbjct: 561 LTDGPDAPHLFCVGDDWQSIYAFRGAVVEYFVDFEEYFGPAAITELRETYRCPATVLEAS 620 Query: 513 NRFIQQNPGQLKK-PLNSLTNGDKKAVTLLDESQLDALLDKLSGYA------------KP 559 I NP Q++K P+ + +LD D++ YA P Sbjct: 621 TDLIANNPTQIEKSPVACSGRETTPRLHVLDGYDEWQYADRVGEYAATLVEQYLNEDSDP 680 Query: 560 EERILILARYHHMRP------ASLE-----------------KAATRWPKLQIDFMTIHA 596 E+ ++IL+RY P +LE A + + H Sbjct: 681 ED-VMILSRYDSGAPFVDQVKEALEARSIPYDGKADGDRYRPDGAPAGSGAGVSVFSAHQ 739 Query: 597 SKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFP---DAEERRLMYVALTRA 653 +KG++A +VI++ + G DGF R + LL PV D DAEERRL YVALTR+ Sbjct: 740 AKGREAPHVILLHVARGEDGFAPDVRNN----ELLNPVRDVSANTDAEERRLFYVALTRS 795 Query: 654 RHRVWALFNKENPSPFVEILKNLDVPVARK 683 + L S F L +D +AR Sbjct: 796 EATLDLLTKAGEESGF---LDEIDAYLARS 822 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 88/338 (26%), Positives = 151/338 (44%), Gaps = 44/338 (13%) Query: 115 GENKWLTREQTSGVQQQIRQALSAL--------PLPVNRLEEFDNCREAWRKCQAWLKDI 166 GE+ TRE+ G + +++A+ P P + N R+ ++ L+ I Sbjct: 69 GEHYLTTRER-RGFSESLQRAIDEYDELRSTTWPFPYSS-----NDRDRLDSIRSELQGI 122 Query: 167 ESARLQ-HNQAYTEAMLTEYADFFRQVESSP--LNPAQARAVVNGEHSLLVLAGAGSGKT 223 +ARL +N+ + E L +Y + F ++ + LN Q +AVV + V+AGAG+GKT Sbjct: 123 -TARLDGYNEEFVERQLEQYENLFTDIDEADHDLNRDQRKAVVRNDEYNQVIAGAGTGKT 181 Query: 224 SVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHII 283 VL R + + RG P++I + R A +E+ +R+ ER ++T TFH+ A I Sbjct: 182 LVLTHRIAYQIERG-VDPDRIAAVTLTRNARDEIQKRLDERFGITEVTVETFHSFANGIA 240 Query: 284 QQGSKKVPIVSKLENDTAARHELFIAEWRKQCS-EKKAQAKGWRQWLTE-EMQWSVPEGN 341 +Q + + D R R + + A A+ +RQ+LT + VP Sbjct: 241 RQATDG----HRSTIDDRDRRNFVEERIRDKLDGDDAAFARHYRQFLTHYSTETPVPN-- 294 Query: 342 FWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEE-IRD-LFSKRIKLMAPLLKAW 399 D E + +R +R + E +AS E+ I D LF+ ++ + W Sbjct: 295 --DHESRAEYVRARSERSYETL------AGETVASQAEKAIADFLFTHGVEYQYEAIAEW 346 Query: 400 --KGALKAENAVDFSGLIHQAIVI----LEKGRFISPW 431 G + + DFS L I I +++ ++PW Sbjct: 347 AETGEDRDVYSPDFS-LPEYDITIEHWGIDENGAVAPW 383 >UniRef50_A7KV33 PcrA helicase n=1 Tax=Bacillus phage 0305phi8-36 RepID=A7KV33_9CAUD Length = 657 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 94/341 (27%), Positives = 153/341 (44%), Gaps = 55/341 (16%) Query: 197 LNPAQARAVVNG-EHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNPAQ AVV ++ LV+AGAGSGKT VL R G++L G P +IL + F KAA Sbjct: 22 LNPAQKEAVVKTVKNPSLVIAGAGSGKTRVLQKRVGYILENG-IDPRRILTVTFTNKAAT 80 Query: 256 EMDERIRERL---HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM ERI + + I TFH+LA+ W Sbjct: 81 EMKERIGNEVGEARAKKIMIGTFHSLAVR-----------------------------WL 111 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPE---GNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 Q + K W + +E+ + E N DD S+ + + + R+ Sbjct: 112 HQYYSEAGLKKNWTIFDSEDTNKVIKELLKSNNMDD--------SKQNVYATQSRI-SNL 162 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG---- 425 + +MI P++ R + K A + + ++ + NAVDF LI + +++LE Sbjct: 163 KNDMIL--PKDFRKQMEPQDKSFARIYERYQDRMARNNAVDFDDLIMKMVILLESNTEVR 220 Query: 426 -RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 +F +K+I+ DE+QD + + ++ + + +F VGDD+Q IY + GA + Sbjct: 221 RKFQRRYKYIMCDEYQDTNECQYRMIKNI--VGDKNNIFVVGDDYQGIYGWRGANIEKIL 278 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKK 525 F +++ + L+ YR + I N ++ N Q+ K Sbjct: 279 NFQKDYPGTKVVKLEQNYRSTNTIVTAGNAIMKHNTKQMNK 319 >UniRef50_A8MLJ7 ATP-dependent DNA helicase PcrA n=3 Tax=Firmicutes RepID=A8MLJ7_ALKOO Length = 739 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 101/345 (29%), Positives = 157/345 (45%), Gaps = 58/345 (16%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q AV+ E +LVLAGAGSGKT VL R +L+ SP IL + F KAA+E Sbjct: 22 LNPMQKNAVLTTEGPVLVLAGAGSGKTRVLTHRIAYLVEEKGVSPYHILAITFTNKAAKE 81 Query: 257 MDERIRERL--HTEDITARTFHALALHIIQQ-----GSKKVPIVSKLENDTAARHELFIA 309 M ER+ L + D+ TFH+ + I++ G +K ++ DT + L Sbjct: 82 MKERVEALLGDYHRDLWVSTFHSSCVRILRMEIDKLGYEKNFVIY----DTTDQQVLM-- 135 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 K C +K F DEKL + M ++ Sbjct: 136 ---KDCLKK-----------------------FNLDEKL----------FQPRMILNEIG 159 Query: 370 QAEMIASAPEEIRDLFSK--RIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-- 425 +A+ + P E + F R + +A + + ++ +K+ NA+DF LI + + + + Sbjct: 160 RAKDLLIGPNEYLEEFGNDFRNQKIAEIYRLYQDRMKSNNALDFDDLIMKTVQLFQTHPT 219 Query: 426 ---RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + + +K+ILVDEFQD + + L++ L K S L VGDD Q+IY + GA + Sbjct: 220 VLRYYQNKFKYILVDEFQDTNMAQYTLISLLAK--SHGNLCVVGDDDQSIYGWRGADIRN 277 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 F ++F + L+ YR I + AN + N + K L Sbjct: 278 ILGFEKDFPNTQVVKLEQNYRSTKSILDAANMVVANNTDRKSKKL 322 Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 27/109 (24%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + MT+H++KG + V I G++E FP+A S+ E L EERRL YV Sbjct: 565 VTLMTLHSAKGLEFPVVFIPGMEESI--FPSAM--SLQENNL---------EEERRLCYV 611 Query: 649 ALTRARHRVW-------ALFNKENPSPFV-------EILKNLDVPVARK 683 +TRAR +++ L+ + N +P E L +D P RK Sbjct: 612 GITRAREKLYMSHAMTRTLYGRTNANPISRFLGEIPEELIQIDRPYNRK 660 >UniRef50_Q2S550 ATP-dependent DNA helicase pcrA n=2 Tax=Rhodothermaceae RepID=Q2S550_SALRD Length = 786 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 99/341 (29%), Positives = 157/341 (46%), Gaps = 51/341 (14%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV E ++++AG GSGKT L R +LLA G+A P IL L F KAA E Sbjct: 29 LNDKQREAVTTTEGPVMIIAGPGSGKTRALTHRIAYLLAAGKAQPRDILALTFTNKAANE 88 Query: 257 MDERIRERLHTEDITAR---TFHALALHIIQQGSKKVPIVSKLE-NDTAARHELFIAEWR 312 M ER+ E L +D TFH+ +++ K+ DTA L Sbjct: 89 MQERV-EALVGDDARGMWVGTFHSSFARLLRMEGDKIGYSEDFSIYDTADSKRLI----- 142 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 + Q KG R L + + + S+ RM A+ E Sbjct: 143 ------RQQMKG-------------------------RNLDTDVVKPRSVQRMISSAKNE 171 Query: 373 MIASAPEEIRDLF-SKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----R 426 MI P+E +L + +++A + A++ ALK NA+DF L+ + I + E+ + Sbjct: 172 MID--PQEYAELARGDQQEIVAEVYPAYERALKQANALDFDDLLLKPIELFEQHEDVLEK 229 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + + W+++ +DE+QD + + L L ++ L VGDD Q+IY F GA ++ F Sbjct: 230 YQTRWQYVHIDEYQDTNQAQYVLARKLSARHK--NLCVVGDDAQSIYAFRGADITNILNF 287 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 ++ + L+ YR I +A+ I++N Q++K L Sbjct: 288 DNDYPDATTIRLERNYRSTENIIRLADSIIEENDDQIEKSL 328 Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust. Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 12/71 (16%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 ++ MT+HA+KG + V + GL+EG FP ++ E+A L EERRL Y Sbjct: 573 KVTLMTLHAAKGTEFPVVFVAGLEEGL--FP--LEQATQEKAELE--------EERRLFY 620 Query: 648 VALTRARHRVW 658 V +TRA R++ Sbjct: 621 VGVTRAEERLY 631 >UniRef50_B8I5U1 ATP-dependent DNA helicase PcrA n=14 Tax=Firmicutes RepID=B8I5U1_CLOCE Length = 785 Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 100/356 (28%), Positives = 160/356 (44%), Gaps = 44/356 (12%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV++ E LL+LAGAGSGKT VL R +L+ + P IL + F KAA E Sbjct: 7 LNKEQKEAVLHNEGPLLILAGAGSGKTRVLTHRIAYLIEQHGIYPSNILAITFTNKAARE 66 Query: 257 MDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M ERI + + D+ TFH++ + I+++ +K+ ++ I E K+ Sbjct: 67 MKERIAGLIGDLSNDMWVGTFHSICIRILRRDIEKLGYDRSFVIYDTQDQQVVIKECIKE 126 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 S+ E NF S++ G + E+I Sbjct: 127 --------------------LSINEKNFPPK---------------SVLETIGKQKDELI 151 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRFIS 429 + E R+ +A + K ++ LKA NA+DF +I I + +K + Sbjct: 152 DAVHYEKLYASDFRMGKIAKIYKLYEKKLKANNALDFDDIIMNTIKLFDKYPEVLDYYQR 211 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 +++ILVDE+QD + + L+ L + +Q L VGDD Q+IY + GA + F ++ Sbjct: 212 RFRYILVDEYQDTNTAQYTLVRKLSE--AQENLCVVGDDDQSIYGWRGANIRNILDFEKD 269 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQ 545 F + L+ YR I + AN I N G+ K L + G K V ++++ Sbjct: 270 FKKCCTIKLEQNYRSTQNILDAANHVIGNNTGRKCKSLWTDNKGGSKIVICENDNE 325 >UniRef50_Q4FPM1 DNA helicase II n=5 Tax=Bacteria RepID=Q4FPM1_PELUB Length = 678 Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 107/369 (28%), Positives = 168/369 (45%), Gaps = 58/369 (15%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + LN AQ AV+ + LL++AGAGSGKT VL +R ++ +A P QIL + F KAA Sbjct: 8 NNLNNAQKEAVLYLDGPLLIVAGAGSGKTKVLTSRIAHIINEKKAFPNQILSVTFTNKAA 67 Query: 255 EEMDERIRERLHTEDITAR---TFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 +EM R+ L++E I TFH++ +++ K P N T + + Sbjct: 68 KEMQNRVSSILNSEAIGLSWLGTFHSICAKLLR---KHAPAAGLTSNFTIIDTDDQVRLI 124 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 + C KA+ +Q P + + S +DRW + G Sbjct: 125 KNIC---KAENIDIKQL--------AP-----------KFILSIIDRW----KNKGFHPD 158 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFI--- 428 E++ + D+F + I+ PL K ++ L NA DF LI + ILEK I Sbjct: 159 EVVINK----NDIFERTIR---PLYKIYQQKLLDLNACDFGDLILHVVKILEKNHDIRNI 211 Query: 429 --SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + +K+ILVDE+QD + ++ L L ++ L VGDD Q+IY + GA++ F Sbjct: 212 YSNNFKYILVDEYQDTNYIQSRWLNLLSEK--HKNLCCVGDDDQSIYSWRGAEIKNFLEF 269 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKP------------LNSLTNGD 534 + + + L+ YR + I VA+ I N ++ K LN NG Sbjct: 270 DQVYKNSKVIRLEENYRSSQNILSVASNLIANNQNRVGKTLKTTMEEGDLVKLNCFKNGK 329 Query: 535 KKAVTLLDE 543 +A+ + DE Sbjct: 330 DEAIGVSDE 338 >UniRef50_Q83GZ5 ATP-dependent DNA helicase n=2 Tax=Tropheryma whipplei RepID=Q83GZ5_TROWT Length = 743 Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 102/342 (29%), Positives = 156/342 (45%), Gaps = 39/342 (11%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q V +LL+ AGAGSGKT VL R LA GEAS +QIL + F KAA E Sbjct: 11 LNPQQVEGVCYRGPTLLISAGAGSGKTKVLTHRIAGFLATGEASCDQILAITFTNKAASE 70 Query: 257 MDERIRE--RLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M R + L D+ TFH++ + I+++ V + K +N T ++ A ++ Sbjct: 71 MRHRTGDLVGLSVRDMQISTFHSVCVRILREC---VGHLGKAKNFT-----IYDAADQRA 122 Query: 315 CSEKKAQAKGWRQWLTEEM---QWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 ++ Q+ LT M Q + + + R LAS Sbjct: 123 IIKQICQSTDTF-GLTASMVASQIGLLKNQMHTPDTYSRCLASN---------------- 165 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISP- 430 ++ + + +R + + + + ++ LK NA DF LI + + +L+K IS Sbjct: 166 ---STNGNSVTSITLQREQFILHVFRRYQEILKEANAFDFDDLISETVFLLQKSPEISAM 222 Query: 431 ----WKHILVDEFQDISPQRAALLAALRKQN-SQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 WK++LVDE+QD + + L+ L K + S +L AVGD Q+IY F GA ++ Sbjct: 223 YRNRWKYLLVDEYQDTNHAQYRLILELTKGDKSDMSLTAVGDSDQSIYAFRGADIANIVN 282 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 F +F + L+ YR I AN I N + K L Sbjct: 283 FENDFPDCHTILLEQNYRSCQNILLAANALISNNQNRKDKNL 324 >UniRef50_B1AJE0 ATP-dependent DNA helicase PcrA n=15 Tax=Ureaplasma RepID=B1AJE0_UREP2 Length = 743 Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 109/407 (26%), Positives = 177/407 (43%), Gaps = 49/407 (12%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 ++ S LN Q AV LV+AGAG+GKTSVL R +L+ P +IL F Sbjct: 5 IDYSRLNQEQKEAVTADLGPQLVIAGAGTGKTSVLTLRIAYLITEKNIHPSRILGFTFTN 64 Query: 252 KAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 KAA+EM ER+ + + TFH++ + I+QQ + + ++ E+ + E Sbjct: 65 KAADEMKERVGKTIGVSIPYLSTFHSMCVKILQQDIHYLNYHNNIKIIDTDDQEVLLKEI 124 Query: 312 RKQCS-EKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 Q + EKK+Q S + F+D + L + +++ L+ ++ + Sbjct: 125 FDQLNIEKKSQVIK-----KIIKTISKVKNKFFDQNDM---LNEKNHKYLELVDLNDAQR 176 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLI---HQAIV----ILE 423 + + K + N VDF LI H+ + +LE Sbjct: 177 ---------------------LVDIYKIYCDRCFKLNYVDFDDLINLTHKLFIEFPEVLE 215 Query: 424 KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 K + + + +ILVDEFQD + + L++ L + LF VGD Q IY F GA+ + Sbjct: 216 KWQ--NKFDYILVDEFQDTNKIQYDLISLLATK--HQNLFVVGDPDQMIYSFRGAEQWII 271 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSL-TNGDKKAVTLLD 542 F +NF + L T YR I ANR I N KK L + TN + + L Sbjct: 272 NNFSQNFKNTKVTILKTNYRSTQPILNTANRLIDANNNNYKKNLTAFNTNDNNLPIYLRG 331 Query: 543 ESQLDAL------LDKLSGYAKPEERILILARYHHMRPASLEKAATR 583 ++ +D + +L P +I +L R +H ++E++ R Sbjct: 332 QNPIDEANWIARKIRELLEEGTPANQIAVLFRSNHY-SRTIEQSMMR 377 >UniRef50_Q6KHF5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma mobile RepID=Q6KHF5_MYCMO Length = 723 Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 104/346 (30%), Positives = 163/346 (47%), Gaps = 54/346 (15%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AVV + L ++AGAGSGKT VLV + +L+ + P QIL + F KAA E Sbjct: 12 LNKDQKLAVVFNDSPLRIIAGAGSGKTRVLVHKIAYLIQKMNVKPYQILAVTFTNKAANE 71 Query: 257 MDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLEN----DTAARHELFIAE 310 M ERI+ + H + TFHAL ++I++ + + ++ +N D A + ++ Sbjct: 72 MKERIKTLVDNHESEPLISTFHALCVYILR---RDIDVLKYPKNFTILDVADQFDIL--- 125 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 K EK +D K+ L S ++ ++S ++ Sbjct: 126 --KNIYEK------------------------FDINKIDITLTSMIN-YISFHKI-NKTP 157 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFIS- 429 E++ + D RIKL L + LK +DF+ L+ + + EK I Sbjct: 158 IEVLETEDNSEDD----RIKLKIYL--EYNEILKKLALLDFNDLLLKTQELFEKFPEIKL 211 Query: 430 ----PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 +K+ILVDEFQD SP + ++ L QN T+ VGD Q IY + GA ++L Sbjct: 212 KWSRRFKYILVDEFQDTSPIQYEIIKTL-AQNHNLTI--VGDPDQTIYSWRGANVNLILD 268 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLT 531 FH++F + +L+ YR +I + AN I N +L+K L + T Sbjct: 269 FHKDFENAKTINLNLNYRSTEKILKHANSLIHFNKKRLEKDLVAYT 314 >UniRef50_B4CU41 UvrD/REP helicase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU41_9BACT Length = 678 Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 107/365 (29%), Positives = 174/365 (47%), Gaps = 60/365 (16%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q +AV E LL+LAGAG+GKT V+ R +L+++G P IL + F KAA+E Sbjct: 9 LNPEQEQAVRTTEGPLLILAGAGTGKTRVITMRVAFLISQG-VDPSHILAVTFTNKAADE 67 Query: 257 MDERIRERL---HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 M ER+ + + + +T TFHAL + I++Q +K+ W+K Sbjct: 68 MRERLAKMIEPSQAKKVTMSTFHALCVRILRQDIEKLG-------------------WKK 108 Query: 314 QCS--EKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 S ++ Q ++ +T DEKL +A L +S + +G + Sbjct: 109 NFSIYDEGDQMGLIKKIITRTAA---------KDEKLDPNVAKNL---ISKAKNNGWRE- 155 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGR 426 ++ E+ L + ++ LK NAVDF L+ A+ +L + R Sbjct: 156 --VSPGDEKT---------LAGAVFARYQAELKTLNAVDFDDLLLLAVKVLSEHADVRDR 204 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQT----TLFAVGDDWQAIYRFSGAQMSL 482 + +++++VDEFQD + + L++ L K T + VGDD Q+IY + GA++S Sbjct: 205 WHRRFRYLMVDEFQDTNRLQLELVSMLAKPAEGTGGRPNVAVVGDDDQSIYGWRGAEVSN 264 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL-NSLTNGDK-KAVTL 540 F +F + L+ YR + I AN I+ NP + K L +S +GDK + V + Sbjct: 265 ILEFEAHFPDPVVVKLEQNYRSTNAILNTANFLIKNNPRRRPKKLWSSAGDGDKVRIVGM 324 Query: 541 LDESQ 545 D+ Q Sbjct: 325 SDDRQ 329 >UniRef50_A4XKK0 ATP-dependent DNA helicase PcrA n=2 Tax=Clostridia RepID=A4XKK0_CALS8 Length = 714 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 109/388 (28%), Positives = 172/388 (44%), Gaps = 58/388 (14%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV++ E LLVLAGAGSGKT V+ R ++L G A P IL + F KAA+E Sbjct: 7 LNKEQLEAVLSTEGPLLVLAGAGSGKTRVITYRIAYILNMGLAKPSNILAITFTNKAADE 66 Query: 257 MDERIRERLHTEDIT---ARTFHALALHIIQQGSKKVPIVSKLE-NDTAARHELFIAEWR 312 M ERI++ + E TFH+ I++ + + + D R++L Sbjct: 67 MKERIKKLVSVESFAEMWVSTFHSACAKILRMEAHNIGFSNNFVIFDMQDRNQLL----- 121 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 K+C K D+EKL+ + SRL +S + ++ Sbjct: 122 KECFTKLN----------------------IDEEKLELKFVSRL---ISNFKNMLVGPSD 156 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RF 427 + + R + + + + LK NA DF L++ I++ + ++ Sbjct: 157 VYKEGNVDPR---------VVEVYRLYNKLLKEYNAFDFDDLLYYTIMLFKTNPDILEKY 207 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 +K+ILVDE+QD + + L+ L +++ + VGDD Q+IY F GA + F Sbjct: 208 QHKFKYILVDEYQDTNHAQFYLIYLLSQKHRNICV--VGDDDQSIYSFRGADVRNILEFE 265 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKK-----AVTLLD 542 F + + L+ YR I AN I+ N + K L + N +K A +D Sbjct: 266 NVFPDAKVIKLEKNYRSTKTILSAANEVIKNNRNRKPKRLWTDNNEGEKIYLYPAFDEVD 325 Query: 543 ESQLDALLDK--LSGYAKPEERILILAR 568 E+ ++ K + G KP E I IL R Sbjct: 326 EANFVSMSIKNLIQGGIKPSE-IGILYR 352 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 19/94 (20%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 ++ MT+HA+KG + + V + GL+EG FP E +E L +E EERRL Y Sbjct: 545 KVMLMTVHAAKGLEFEVVFLTGLEEGL--FPLLRSEGEIE--LQNELE-----EERRLCY 595 Query: 648 VALTRAR----------HRVWALFNKENPSPFVE 671 VA+TRA+ RV+ F+ S F++ Sbjct: 596 VAITRAKRFLVLTYANNRRVFGRFSSRQKSSFID 629 >UniRef50_Q018Z5 ATP-dependent DNA helicase (ISS) n=1 Tax=Ostreococcus tauri RepID=Q018Z5_OSTTA Length = 859 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 101/352 (28%), Positives = 163/352 (46%), Gaps = 55/352 (15%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN AQ AV+ + VLAG GSGKT VL+ R L+ + P +IL + F KAA+E Sbjct: 73 LNDAQRAAVLAPVGATRVLAGPGSGKTHVLIGRVAHLIHEEKTPPREILCITFTNKAAKE 132 Query: 257 MDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 + ER+R+++ ++ITA TFH++A ++++ +++P + + T ++ A+ K Sbjct: 133 LRERLRDKIGEVAAKEITAGTFHSVAARMLRRHGERIPGIGRTGEFT-----IYDADDSK 187 Query: 314 QC-----------SEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSL 362 Q S+K AQ R W++ S + V L Sbjct: 188 QIVQSVLVNKFGESKKTAQPGPMRNWISTA--------------------KSCVKHSVGL 227 Query: 363 MRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVIL 422 G + A + I + +R L ++ L+ NA DF L+ + +L Sbjct: 228 ---RGSQMLRALEDAKKPIPPMSQQR---FVELYDEYEDGLRQANAFDFDDLLSATVAML 281 Query: 423 E-----KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSG 477 E + + W +LVDEFQD S + L+ L Q ++F VGD QAIY + G Sbjct: 282 EMCPDVRAYYERRWSQVLVDEFQDTSTTQYELIRKL--SQPQGSVFVVGDADQAIYGWRG 339 Query: 478 AQMS-LTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLN 528 A+++ + T F ++F E + L T YR S I E A I+++ PL+ Sbjct: 340 AEVANIRTQFDQDFKEVQTHMLTTNYRSTSTIVEAAQAVIKES--SFPSPLD 389 >UniRef50_C2L0R7 ATP-dependent DNA helicase PcrA n=1 Tax=Oribacterium sinus F0268 RepID=C2L0R7_9FIRM Length = 793 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 99/338 (29%), Positives = 164/338 (48%), Gaps = 44/338 (13%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q A +GE LL+LAGAGSGKT VL R +L+ SP QIL + F KAA+E Sbjct: 7 LNKEQYEAATHGEGPLLILAGAGSGKTRVLTHRIAYLILEKGISPYQILAITFTNKAAQE 66 Query: 257 MDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M +R+ + L +I TFH++ L I+++ + L D+ + I + Q Sbjct: 67 MRDRVNQLLPERQGEIWVSTFHSMCLRILRRE------IGNLGYDS----DFSIYDTDDQ 116 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 K + + +E+Q D + L+ RL +S ++ G + ++ + Sbjct: 117 --------KTVMRQVFKELQ--------IDSKMLKERLVL---SALSQVKNQGRSVSDYL 157 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRFIS 429 PE D +I+ ++ ++ LK NA+DF L+ + + EK ++ Sbjct: 158 LEDPE---DFLDGKIR---ACIRLYEEKLKQNNALDFDDLLLRCKELFEKFPAVLEKYQE 211 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 +++ILVDE+QD + + L+ L K+ + VGDD Q+IYRF GA + +F + Sbjct: 212 RFRYILVDEYQDTNDVQFHLVYLLAKKYQ--NICVVGDDDQSIYRFRGANVENILSFESH 269 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 F + L+ YR + I ++AN I +N + +K L Sbjct: 270 FPNCKVVKLEQNYRSTAPILDLANVVIAENQHRKQKKL 307 >UniRef50_C4Z8S4 ATP-dependent DNA helicase PcrA n=17 Tax=Firmicutes RepID=C4Z8S4_EUBR3 Length = 763 Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 97/342 (28%), Positives = 162/342 (47%), Gaps = 52/342 (15%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV+ E LL+LAGAGSGKT VL R +L+ +P I+ + F KAA E Sbjct: 6 LNEQQREAVLTTEGPLLILAGAGSGKTRVLTYRTAYLIDECGVNPYNIMAITFTNKAAGE 65 Query: 257 MDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M ERI + + +E I TFH+ + I+++ + +L DT ++ A+ Sbjct: 66 MRERIDDMVGYGSESIWVSTFHSTCVRILRR------YIDRLGYDT--NFTIYDAD---- 113 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 ++KA K + L + +++ + + + A+ EMI Sbjct: 114 --DQKALMKDICKRL---------------------EIDTKMYKEKMFLNVISSAKDEMI 150 Query: 375 ASAPEEIRDLFSKRI--KLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----F 427 P E + F+ + A + K ++ ALK NA+DF L+ + + + + + + Sbjct: 151 D--PIEFENRFTGDFVKRKQALVYKEYQNALKQNNALDFDDLLVKTVELFKLDKEVLDYY 208 Query: 428 ISPWKHILVDEFQDISPQRAAL--LAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 +++I+VDE+QD + + L L A++ +N L VGDD Q+IY+F GA + Sbjct: 209 QERFRYIMVDEYQDTNTVQFELIRLLAMKYKN----LCVVGDDDQSIYKFRGANIYNILN 264 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 F ++F + + L+ YR I + AN I N G+ K L Sbjct: 265 FEKHFEDAKVIKLEQNYRSTQNILDAANSVISNNVGRKDKRL 306 >UniRef50_C8WV10 UvrD/REP helicase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WV10_ALIAD Length = 705 Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 103/366 (28%), Positives = 162/366 (44%), Gaps = 61/366 (16%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q AV LLV+AGAGSGKTSVL R +L+A + +IL + F KAA E Sbjct: 11 LNPEQRDAVTTTSGPLLVVAGAGSGKTSVLTRRIAYLIAHAGVAVHEILAITFTNKAARE 70 Query: 257 MDERIRERL--HTEDITARTFHALALHIIQQGSKKV------PIVSKLENDTAARHELFI 308 M RIR+ + +D+ TFH++ + I+++ + ++ I+ + + + L Sbjct: 71 MKTRIRDLIGPRADDLWMGTFHSICVRILRREADRLGYQPNFTILDSEDQEALVQQCLLD 130 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 + + + ++ QW E V E N Sbjct: 131 LGYDLKTHDARSIKHRISQWKNEGATRVVNESN--------------------------- 163 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE----- 423 +++IA + + +L++KR L A NA+DF LI + +LE Sbjct: 164 -PSDLIA---DRVMELYNKR--------------LFAANAMDFDDLIGHTVRLLEQNDDL 205 Query: 424 KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 + ++ ++H+LVDE+QD + + LL L ++ L AVGD QAIY + GA Sbjct: 206 RDKYQEKFRHVLVDEYQDTNGIQFRLLRLLCAKHR--NLCAVGDADQAIYAWRGADSEHM 263 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSL-TNGDKKAVTLLD 542 F +F + + L YR I + AN I NP + K L S +GDK V L Sbjct: 264 LRFERDFPDAKIVVLTRNYRSTQEILDAANSVIAHNPRRRPKELRSTRGHGDKPLVVRLP 323 Query: 543 ESQLDA 548 + +A Sbjct: 324 DGAAEA 329 >UniRef50_A6DKH4 UvrD/REP helicase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DKH4_9BACT Length = 674 Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 115/402 (28%), Positives = 180/402 (44%), Gaps = 52/402 (12%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q +AV E LL+LAGAG+GKT V+ +R +++ G A P +IL + F KAA E Sbjct: 8 LNDEQRQAVTTTEKPLLILAGAGTGKTMVVTSRIAFIVQSGRAEPGEILAVTFTNKAANE 67 Query: 257 MDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 M ER + +D+ TFH+ + I++ K + +AE+ Sbjct: 68 MKERAGRLIGQKAVKDLWVSTFHSFGMKILR----------KYAYQAGYAPDFTLAEYGD 117 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 Q K Q L E + E D K +SL+ M Sbjct: 118 QVGLIK-------QGLNE---LGLVEDGMSQDPKA----------ILSLISM--AKAKNQ 155 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFI----- 428 + EE D + +RI + + ++ L A N +DF L+ + +L+K + Sbjct: 156 VPEDLEESSDPWEQRI---GGIYRYYQEYLHALNILDFDDLLMLTVRLLQKDEKVRQLLQ 212 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 +K+++VDEFQD + + LL AL ++ + + VGDD Q+IY + GA+++ AF + Sbjct: 213 DKFKYVMVDEFQDTNHIQMELLHALLPKH-EPNICVVGDDDQSIYSWRGAEVANILAFPQ 271 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQ--- 545 F G+ L+ YR N+ I AN+ I N + K L S G +K + S+ Sbjct: 272 IFPGGKLIKLEQNYRSNNVILNAANKVISINSQRHVKNLWSAQEGGEKLKVVACGSEERE 331 Query: 546 ----LDALLDKLSGYAKPEERILILARYHHMRPASLEKAATR 583 D +L+K++G IL R +H A LE A R Sbjct: 332 AKAIADTILNKVNGRQNTYGDCAILYRSNHQSRA-LEDAMRR 372 Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust. Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 51/192 (26%) Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNP------------------GQLKKPL 527 F ENFG D +FN+R+ E +F ++ P G++ KP Sbjct: 449 FMENFGRSS----DALMKFNNRVEEFRQKFQEKVPLAGLVEQYFEGVGYIEGLGRMYKPR 504 Query: 528 NSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKL 587 + +K+ +L+ ++ + G K ++R + L Y + SL + R + Sbjct: 505 E---DAEKRYQNVLE------IIHTIEGREKEDKRCIPLQEY--LESVSLMEEYRRRQEK 553 Query: 588 QID-----FMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEE 642 D +T+HASKG + V + G+++ + FP + +AL AEE Sbjct: 554 DEDPNAVMLLTVHASKGLEFPSVFVTGMEK--NLFPHEKSAGL--KAL---------AEE 600 Query: 643 RRLMYVALTRAR 654 RRL YVALTRA+ Sbjct: 601 RRLFYVALTRAK 612 >UniRef50_C4ZAR0 ATP-dependent DNA helicase n=4 Tax=Clostridiales RepID=C4ZAR0_EUBR3 Length = 617 Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 96/353 (27%), Positives = 161/353 (45%), Gaps = 50/353 (14%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 N AQ A+ + + ++LVLAG GSGKT+V+ R L+ + P +IL++ F + AA E Sbjct: 3 FNKAQLGAIEHKDGAMLVLAGPGSGKTAVITHRTKKLITKHHVKPSEILVITFTKAAANE 62 Query: 257 MDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M ER + E +++ TFHA+ I++ + S D + R+ R+ Sbjct: 63 MKERFNSLMKDERVNVSFGTFHAVFFTILKYAYR---FTSANIADESVRYGFI----REI 115 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 S + + K +++ GN + L + SR+D + + G E I Sbjct: 116 LSYYRLEYKDENEFI----------GNLLAEISLIKN--SRID----IENFYSGVCGEEI 159 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVIL-EKGRFISPW-- 431 RD++ K ++ LK +DF ++ + E+ ++ W Sbjct: 160 ------FRDIYKK-----------YETRLKENRLIDFDDMLSYTYELFKERPDILALWQN 202 Query: 432 --KHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 K+IL+DEFQDI+ + ++ L Q LF VGDD Q+IYRF G++ + F ++ Sbjct: 203 KYKYILIDEFQDINRLQYEIIKML--AAPQNNLFIVGDDDQSIYRFRGSKPEIMLGFEKD 260 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD 542 + + +R LDT YR I E + I N + K + + + K VT D Sbjct: 261 YPDAKRILLDTNYRCGRYIVEASLNLISHNRERFDKKIIAASKS-KAPVTFAD 312 >UniRef50_Q5PB91 DNA helicase II n=20 Tax=Rickettsiales RepID=Q5PB91_ANAMM Length = 671 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 90/336 (26%), Positives = 151/336 (44%), Gaps = 43/336 (12%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV + +L+LAGAG+GKT + +R G+++ RG A P QIL + F KAA E Sbjct: 37 LNEEQKEAVFCVDGPVLILAGAGTGKTRTITSRMGYIIKRGLAFPSQILAVTFTNKAARE 96 Query: 257 MDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCS 316 M R+ E + T I TFHA+A I++ +++V + R + + Q Sbjct: 97 MLVRVSEIVDTTGIWLGTFHAIAARILRSNAERVGL----------RRDFTVIGPDDQLQ 146 Query: 317 EKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIAS 376 KA + + Q P +++ + RW + G + Sbjct: 147 LIKA--------IVNDTQPGHPAEEC-------KKMMHAIQRWKEKGLLPAGVTDTELQK 191 Query: 377 APEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRFISPW 431 P +RD++ + ++ LKA N DF L+ + + + + Sbjct: 192 CPNIVRDVYYE-----------YQERLKALNCADFGDLLLYNVSMFSAHADVLSHYQEQF 240 Query: 432 KHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFG 491 K+++VDE+QDI+ + L + ++ + + VGDD Q+IY + GA++ F ++F Sbjct: 241 KYVMVDEYQDINTVQYLWLRLIVQK--RKNICCVGDDDQSIYSWRGAEVGNILRFADDFP 298 Query: 492 EGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 E + L+ YR S I A+ I N +L K L Sbjct: 299 EAKIVRLECNYRSTSNILCAASAIINNNKSRLGKKL 334 Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 28/108 (25%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 + MT+HA+KG + V + G +EG FP E + ++ +E EERRL Y Sbjct: 567 HVYLMTLHAAKGLEFPLVFLPGWEEGV--FP---HEKSIHDSTGNALE-----EERRLAY 616 Query: 648 VALTRARHRVW------------------ALFNKENPSPFVEILKNLD 677 V +TRAR +++ + F KE P+ V++LKN+D Sbjct: 617 VGMTRAREQLFISCVAVREVNNWRQPMKISRFIKELPAEHVQVLKNVD 664 >UniRef50_Q600N7 ATP-dependent DNA helicase n=6 Tax=Mycoplasma RepID=Q600N7_MYCH2 Length = 769 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 92/338 (27%), Positives = 159/338 (47%), Gaps = 33/338 (9%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV++ L ++AGAG+GKTSVL + +++ A P +IL L F KAAEE Sbjct: 26 LNEKQKIAVISNSSHLRIVAGAGTGKTSVLTKKIAYIINESLAYPSRILALTFTNKAAEE 85 Query: 257 MDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M R+ + + ++DI TFH+L I++ +K + +S E+ ++++R Sbjct: 86 MRNRVEKLVGEKSKDIQILTFHSLCNLILRLEAKNIVELS----------EIPLSDYRFN 135 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 +++ Q K + L + ++ + DD + A +++S + + +++ Sbjct: 136 IIDEQDQKKIVEKLLGKYLKAN-------DDRDETKISAFDAIKFISNAKNWEKSPEDLL 188 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRFIS 429 S E+ ++ + + + K N +DF L+ + EK R+ Sbjct: 189 KSINNELD-------QIKVQVYQKYLEKTKENNIIDFDDLLLYTKIAFEKSPEIRSRWQR 241 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 + +LVDEFQD S + +L K +T L VGD Q IY + GA SL ++ Sbjct: 242 KFDFVLVDEFQDTSLVQYLILKIFIK--DKTRLVVVGDPDQTIYSWRGADPSLILNLEQD 299 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 F + + LD YR I + AN I+ N ++KK L Sbjct: 300 FPDLQTVILDKNYRSTQNILDAANNLIENNQNRIKKKL 337 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 10/80 (12%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 +I+ +T+H+SKG + +YV +VG+ +G FPA + ++++ E EERRL + Sbjct: 595 KINLLTVHSSKGLEFEYVFLVGMNQGV--FPA---QKVLDQNSTSEYE-----EERRLAF 644 Query: 648 VALTRARHRVWALFNKENPS 667 VA+TRA+ ++ PS Sbjct: 645 VAVTRAKRVLYITNGYRAPS 664 >UniRef50_Q1DC55 ATP-dependent DNA helicase PcrA n=2 Tax=Cystobacterineae RepID=Q1DC55_MYXXD Length = 783 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 105/360 (29%), Positives = 167/360 (46%), Gaps = 60/360 (16%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV++G+ LLVL+GAGSGKT V+ R +L+ P +IL + F KAA E Sbjct: 15 LNAPQREAVLHGDGPLLVLSGAGSGKTRVITRRVAYLVKVHNVYPWRILAVTFTNKAARE 74 Query: 257 MDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M ER+ + L ++ TFH+ A I+++ ++ V + I + Q Sbjct: 75 MRERLVQLLGAQANELVVSTFHSAAAQILRREAEHVGLT----------RSFVIYDDSDQ 124 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 + K + R+ E MQ R + R+D+ + R+ E + Sbjct: 125 LNVVK---RAMREAGIESMQ--------------PREILHRIDQEKNAARL-----PEHM 162 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIV-------ILEKGRF 427 AP + +R +L+ + A++ L+A NAVDF L+ + +LE R Sbjct: 163 QVAPGD------ERGQLVRKVYAAYQERLRAANAVDFGDLLLLLVTLFRTRPDVLENYR- 215 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + H+LVDEFQD +P + ALL L S L VGDD Q+IYR+ GA + F Sbjct: 216 -RRFHHVLVDEFQDTNPVQYALLKQLAPPPS-ANLVVVGDDDQSIYRWRGADVDNILGFP 273 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKK----------PLNSLTNGDKKA 537 + + L+ YR + I + A+ I++N +++K LN + N D++A Sbjct: 274 RQYPGAKVVKLEQNYRSDQNILDAAHEVIRKNTRRMEKKLWSERQRGQTLNLMLNRDERA 333 Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 11/78 (14%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFP---AAARESI----MEEALLPPVEDFPDA 640 ++ MT+HA+KG + D V + G++E + FP A ES + A P E+ A Sbjct: 582 RVALMTLHAAKGLEFDAVFLTGMEE--NVFPHSRAVKSESTFLNEVASADGEPSEEM--A 637 Query: 641 EERRLMYVALTRARHRVW 658 EERRL YV TRAR R++ Sbjct: 638 EERRLCYVGFTRARKRLF 655 >UniRef50_C6HUX3 Putative ATP-dependent DNA helicase, UvrD/REP family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUX3_9BACT Length = 796 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 95/350 (27%), Positives = 162/350 (46%), Gaps = 44/350 (12%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q AV + E LLVLA AGSGKT V++ R +L+ R E + F RKAA E Sbjct: 21 LNPEQRLAVTHEEGPLLVLAPAGSGKTRVVIERLLFLIERSGRGGESFFVATFTRKAARE 80 Query: 257 MDERIRERLHTEDIT-ARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQC 315 + ERI RL + TFH+L+ ++++ + + + A + + E + Sbjct: 81 LVERISHRLPDARLPYVGTFHSLSARLLRRLADRAGLPPDFTVSDAGDQKALVREIMR-- 138 Query: 316 SEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIA 375 R ++EE + E L++ + +W + + G Sbjct: 139 ----------RHKVSEE--------DVAPQEILRQ-----ISQWKNARQTPG-------- 167 Query: 376 SAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISP----- 430 PE R LF R + MA + ++ L+ ++D+ L+ + + +L ++ Sbjct: 168 --PELARRLFGSR-RFMATCYEEYEEGLRKNRSLDYDDLLCRLVGLLSSQPDVATALRQE 224 Query: 431 WKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENF 490 + HILVDE+QD +P + L+ L ++ T+ VGDD Q+IYRF GA+++ F +++ Sbjct: 225 FHHILVDEYQDTNPLQEELIRLLSRERRNVTV--VGDDDQSIYRFRGAEVAHIQRFSDHY 282 Query: 491 GEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL 540 R L YR S I + A I++N G+ K + ++ G + + Sbjct: 283 PGAGRVLLSRNYRSTSAIVDSATSVIRKNDGRYMKTVTAVRGGGSPVLLM 332 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 24/95 (25%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFP--AAARESIMEEALLPPVEDFPDAEERRL 645 ++ MTIH SKG + D V++ GL++ F A R S E EERRL Sbjct: 562 RVGLMTIHQSKGLEFDCVVVAGLEDQLLPFRSFAGGRSSTDIE------------EERRL 609 Query: 646 MYVALTRARHRV---WA----LFNKE---NPSPFV 670 YVA+TRAR R+ WA ++ K PSPF+ Sbjct: 610 FYVAMTRARERLHLTWARTRRIYGKTQSFGPSPFL 644 >UniRef50_C2L1F3 Possible ATP-dependent DNA helicase PcrA n=1 Tax=Oribacterium sinus F0268 RepID=C2L1F3_9FIRM Length = 622 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 115/392 (29%), Positives = 178/392 (45%), Gaps = 60/392 (15%) Query: 201 QARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDER 260 Q +A+ G LV+AG GSGKT+VL R LL RG E+ILLL+F R +++EM+ER Sbjct: 24 QRQAIETGAEKALVVAGPGSGKTTVLTERLCTLLERG-VPAEKILLLSFTRASSKEMEER 82 Query: 261 IRERLHTEDITAR--TFHALALHIIQQ--GSKKVPIVSKLENDTAARHELFIAEWRKQCS 316 ++ R T HAL ++++ G KK +V+ E +W Q Sbjct: 83 FFRKMGIRAGRPRFSTIHALCFSLLREDLGYKKEDLVNLYEK----------MDWLSQYY 132 Query: 317 EKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIAS 376 +K L EE+Q +P L +++ + S+ + E IA Sbjct: 133 LEKG-------ILREEVQELLPG------------LIAQISYFKSI------GERERIAY 167 Query: 377 APEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAI-VILEKGRFISPWK--- 432 +E ++ F L ++ + K +DF L+ + + +++EKG W+ Sbjct: 168 LQKEKQEDF-------LALYHFYEESRKKRGKLDFEDLLLEVLRILMEKGDLAKAWQSRF 220 Query: 433 -HILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFG 491 HILVDEFQD+S + ++ +L K S LF VGD+ Q+IY F GA + +F ++ Sbjct: 221 SHILVDEFQDLSLVQYEIIKSLAK--SPNALFVVGDEDQSIYGFRGASPGILLSFTRDYP 278 Query: 492 EGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSL--TNGDKKAVTLLDESQLDAL 549 ER L +R I E++ R I +N + +K L + G K L + L Sbjct: 279 NCERIFLSDNFRSYREIVELSKRLIGKNKERFQKKLQGRQGSGGKAKYYALATGKEEAKL 338 Query: 550 LDKLSGYAK----PEERILILARYHHMRPASL 577 L + AK P E + IL R PA L Sbjct: 339 LVQHIEEAKEEGCPLEEVAILCRSRKQIPALL 370 >UniRef50_A9UZH4 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UZH4_MONBE Length = 654 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 95/343 (27%), Positives = 151/343 (44%), Gaps = 42/343 (12%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV GE + +V+AG GSGKT V+ RA WL+ G A P +++L+ F RKAA E Sbjct: 21 LNAEQRLAVTAGEGATVVVAGPGSGKTRVITRRAAWLIEHGVA-PSEVVLMTFTRKAARE 79 Query: 257 MDERIRERLHTE---------------DITARTFHALALHIIQQGSKKVPIVSKLEN-DT 300 M ER+ + L I A TFH+LAL +++ S + + DT Sbjct: 80 MRERLDQLLAQSGAASGAAAAGQHRAGQIMAGTFHSLALRFLRRYSHLLNLSQNFTQIDT 139 Query: 301 AARHEL---FIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLD 357 +R+ + FI E +K E + K + + GN K+ R S Sbjct: 140 ESRNRILRDFIKECKKAAPEGEESEKSLKPSVV---------GNNISRIKMMRLTPSEAQ 190 Query: 358 RWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQ 417 + + + H E ++ +L S + P + + + E +D+ ++ + Sbjct: 191 QELRRLEQHSELSPEN-----SDLYNLLSSTL----PCYEHYAAVCEREGLIDYDDMLLK 241 Query: 418 AIVILEKG-RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFS 476 + K + P+ HILVDEFQD +P + ++ L + LF VGD Q+IY + Sbjct: 242 CEELFSKAPHVVKPYSHILVDEFQDTNPVQYDMVRHLAHSGN---LFVVGDPNQSIYGWR 298 Query: 477 GAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQN 519 AQ +F ++ L YR I +++ I QN Sbjct: 299 AAQADGYRRIFADFPGTKQVSLAENYRSTGAILSLSSDLINQN 341 >UniRef50_C1VDI7 DNA/RNA helicase, superfamily I n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1VDI7_9EURY Length = 1109 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 91/313 (29%), Positives = 145/313 (46%), Gaps = 42/313 (13%) Query: 395 LLKAWKGALKAENAVDFSGLIHQAIVILEKGRF--ISPWKHILVDEFQDISPQRAALLAA 452 LL+ ++ NA DF +I A ++ G I+ ++H++VDEFQD++ + + A Sbjct: 706 LLQEYQSVYDRYNAYDFVDMIVMATDAIKSGEIDNIAQFRHVMVDEFQDLNLVQIEFVQA 765 Query: 453 LRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVA 512 L ++ LFAVGDDWQ+IY F GA+ F ++F L+T YR + + Sbjct: 766 LLSRHDDARLFAVGDDWQSIYGFKGARPDYFIDFADHFSPAVETRLETNYRCPPSVVKAG 825 Query: 513 NRFIQQNPGQLKKPLNSLT---------------------NGDKKAVTLLDESQLDALLD 551 N I+ N + K + + NG KK V L+ S ++ D Sbjct: 826 NDLIKNNEAKTDKTVTAHKSLETTPRVHLVPGSDDFQYRRNGIKKIVQLVKSSVRES--D 883 Query: 552 KLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI--------DFMTIHASKGQQAD 603 + KP + +++LAR P + + + R I + H +KG++A Sbjct: 884 R-----KPND-VMVLARNQSGSPF-IREISKRLRDADIPVGGENGVEVTKAHQAKGKEAG 936 Query: 604 YVIIVGLQEG-SDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFN 662 +VII G SDGFP R+ + + + D EERRL YVALTRA R+ Sbjct: 937 HVIIANAAGGMSDGFPPTERDRSLTQLVEIDTGSHMD-EERRLFYVALTRAEERLDIQSR 995 Query: 663 KENPSPFVEILKN 675 + SPF++ ++N Sbjct: 996 VDQQSPFLDEIQN 1008 Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 67/259 (25%), Positives = 107/259 (41%), Gaps = 27/259 (10%) Query: 173 HNQAYTEAMLTEYADFFRQV--ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARA 230 +NQ E +Y + F + LN Q AV + V+AGAG+GKT L R Sbjct: 335 YNQKLIEQQRDKYEETFSGFGDDDLSLNAEQELAVYRNDIHNQVIAGAGTGKTFSLSCRV 394 Query: 231 GWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKV 290 +L+ G S + IL + F RKAA EM +R+ E + T H+ + + Sbjct: 395 KYLVEEG-VSEDDILAMTFTRKAATEMSDRLDEMFDISGVETSTLHSFGNRALNEID--- 450 Query: 291 PIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQR 350 P + ++E+ + R + Q ++ +R+ E ++ E N DD+K +R Sbjct: 451 PTLVQIEDQSRLREVGRLIRSLYQADQE------FRKHYDEFLEL-YKEANLKDDDKERR 503 Query: 351 RLASRLDRWVSLMRMHGGAQAEMIASAPEEIRD--------LFSKRIKLMAPLLKAWKGA 402 + L R+ S + G E + S E +D LF I AW G Sbjct: 504 DFLNSL-RYKSDTTLRG----EEVQSRFNEEKDAHTSVADLLFKHDISYHYRKYAAWAGN 558 Query: 403 LKAENAV-DFSGLIHQAIV 420 K + + DFS H ++ Sbjct: 559 PKDQAYIPDFSLPEHNIVI 577 >UniRef50_UPI0001693CE1 UvrD/REP helicase n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001693CE1 Length = 316 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 102/321 (31%), Positives = 149/321 (46%), Gaps = 66/321 (20%) Query: 186 ADFFRQVESS--PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQ 243 A FFR +E + LN Q +AV + LL LAGAG+GKTSVL RA +LL + P Q Sbjct: 41 AAFFRMIEKAGISLNETQIQAVRHDRGPLLTLAGAGTGKTSVLTCRAAYLLKVRQVDPRQ 100 Query: 244 ILLLAFGRKAAEEMDERIRE-----RLHTEDITARTFHALALHIIQQGSKKVPIVSKLEN 298 ILL+ F KAA EM ER+ + + + + ARTFH+L L +I+Q E+ Sbjct: 101 ILLVTFTSKAAAEMRERLADLPGISAVEAKLVGARTFHSLFLQVIRQ--------EGCED 152 Query: 299 D--TAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRL 356 D T R FI K+ + + W PE SRL Sbjct: 153 DLLTDQRRPHFIM---KRLLKIAGLQEAWE-----------PETAL-----------SRL 187 Query: 357 DRWVSLMRMHGGAQAEMIASAPEE--IRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGL 414 W S M +PEE R +++K P+L ++G KAE +DF + Sbjct: 188 SAWKSSML------------SPEEWPARTSMEQQLK---PVLLQYEGWKKAEGKMDFDDI 232 Query: 415 IHQAIVILEKG-----RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDW 469 + +A + + R + +I+VDEFQD +P + L+ + + + L AVGDD Sbjct: 233 LLEAHKLFTRHPEVLERIRRQYAYIMVDEFQDTNPLQYQLVRMIAEPDC--NLMAVGDDD 290 Query: 470 QAIYRFSGAQMSLTTAFHENF 490 Q IY F+GA+ + F + + Sbjct: 291 QTIYTFNGARQAYILQFEQQY 311 >UniRef50_UPI00016B20E8 ATP-dependent DNA helicase PcrA n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B20E8 Length = 702 Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 97/348 (27%), Positives = 162/348 (46%), Gaps = 55/348 (15%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 S LNP Q +AV E LL+LAGAGSGKT L R ++++RG A P QIL + F KA Sbjct: 2 SDKLNPIQQKAVETTEGPLLILAGAGSGKTKTLTHRIAYIISRGLAWPSQILAVTFTNKA 61 Query: 254 AEEMDERIRERLHTEDITAR-------TFHALALHI--IQQGSKKVPIVSKLENDTAARH 304 A EM ER+ L+ +D T R TFH + + I I+ G +P + ++ Sbjct: 62 AREMRERLGSMLN-QDYTQRNFMPWMGTFHGICVKILRIEGGIINIPSNFVIYDE----- 115 Query: 305 ELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMR 364 S+KK K + L D++++ AS + +S + Sbjct: 116 -----------SDKKGVVKQAMKSLN------------ITDKQIKASAASGI---ISAEK 149 Query: 365 MHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE- 423 +IA+A R + ++I + K ++ + NA+DF L+ + + +L+ Sbjct: 150 NKMNTPEIVIANA----RFPYQQQI---GEIYKMYEKLKRESNALDFDDLLLETVNLLKN 202 Query: 424 ----KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQ 479 + ++ +K+I++DE+QD + + +++ L N + + VGDDWQ+IY + GA Sbjct: 203 HPEVRKKWQDHFKYIMIDEYQDTNAAQYLIVSLL--TNDKKNICVVGDDWQSIYSWRGAD 260 Query: 480 MSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 F ++F + L+ YR I E A I +N + K + Sbjct: 261 FRNILNFEKDFSGAQIIKLEQNYRNTGAILEAAQNVIIKNNQRTDKKI 308 >UniRef50_B2S250 Rep helicase, single-stranded DNA-dependent ATPase n=4 Tax=Treponema RepID=B2S250_TREPS Length = 657 Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 105/342 (30%), Positives = 145/342 (42%), Gaps = 60/342 (17%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 S LNP Q RAV E LL++AGAGSGKT V+ AR ++L G +IL L F KAA Sbjct: 3 STLNPEQRRAVTTLEGPLLIIAGAGSGKTRVITARIAYMLECG-ILQSRILALTFTNKAA 61 Query: 255 EEMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM ERI+ + T TFHA + I+ R + + WR Sbjct: 62 HEMSERIKALTGKPLRNTTVSTFHAFGVTIL-------------------REHIHVLGWR 102 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLM--RMHGGAQ 370 K S DE +R L + V L+ + Sbjct: 103 KNFS--------------------------IYDENDKRALIREAAKEVHLLPEVLDTNCV 136 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----G 425 + + ++ + ++L + K A L + ALK NAVDF LI I I + Sbjct: 137 STLFSAIKMQRKNLKELQHKERA-LWHEYHTALKLFNAVDFDDLIVLPIQIFSEYPDILA 195 Query: 426 RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 + S + +ILVDEFQD S Q+ L+ L QN + VGDD Q+IY + GA + Sbjct: 196 SYKSRYHYILVDEFQDTSAQQYRLMKMLATQN----ICVVGDDDQSIYSWRGAHHDNILS 251 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 F ++F L+ YR I AN I N + +K L Sbjct: 252 FEKDFPYATEITLEQNYRSTGTILAAANGVIAHNTQRKEKAL 293 Score = 43.1 bits (100), Expect = 0.032, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 12/70 (17%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + MTIHASKG + V I G++ G+ E +EE + +E EERRL YV Sbjct: 544 VSLMTIHASKGLEFPVVFIAGVEAGT-----IPHERSIEE--VHSIE-----EERRLFYV 591 Query: 649 ALTRARHRVW 658 A+TRA+ +++ Sbjct: 592 AITRAKEKLY 601 >UniRef50_Q8EUN0 ATP-dependent DNA helicase n=1 Tax=Mycoplasma penetrans RepID=Q8EUN0_MYCPE Length = 738 Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 91/326 (27%), Positives = 153/326 (46%), Gaps = 41/326 (12%) Query: 212 LLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDIT 271 L+V+AGAGSGKT+VL RA +LL ++IL F KAA EM +RI + + Sbjct: 25 LMVIAGAGSGKTAVLTYRAVYLLNELNYVSDRILGFTFTNKAANEMKDRITKVIPNRSFK 84 Query: 272 -ARTFHALALHIIQQGSKKVPIVSKLEN----DTAARHELFIAEWRKQCSEKKA-QAKGW 325 TFH++ L I+++ K++ I N D ++ + ++ +K+ K Sbjct: 85 YIGTFHSVCLRILREDIKELNIGKINSNFTIIDEDDQNSILKEIYKLNNFDKQILNYKVC 144 Query: 326 RQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLF 385 W+++ + N +D A+ + W+S + + + +D+F Sbjct: 145 LSWISK-----LKSDNIYD--------ANDVYEWLSFLDNTYDGKVK---------KDIF 182 Query: 386 SKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWK----HILVDEFQD 441 A + + + L+ N +DF LI A +LE + W+ +ILVDEFQD Sbjct: 183 -------AAVYEGYINFLRDGNLLDFDDLIKYARRVLEIEEIRTKWQNRFDYILVDEFQD 235 Query: 442 ISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTT 501 + + ++ L K + +FAVGD Q IY + GAQ ++ F ++F + L+ Sbjct: 236 TNYDQYQIIKLLSK--NFKNIFAVGDPDQMIYSWRGAQENIFEVFKKDFSDSLTIVLEKN 293 Query: 502 YRFNSRIGEVANRFIQQNPGQLKKPL 527 YR I +AN IQ+N ++KK L Sbjct: 294 YRSTKNILNIANSLIQKNKNRIKKNL 319 >UniRef50_C2KR35 ATP-dependent DNA helicase n=3 Tax=Mobiluncus RepID=C2KR35_9ACTO Length = 900 Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 102/373 (27%), Positives = 161/373 (43%), Gaps = 59/373 (15%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNPAQ +AV + +LLV+AGAGSGKT VL R WLLA G P +IL + F KAA E Sbjct: 58 LNPAQYQAVTHPGGALLVMAGAGSGKTRVLTRRIAWLLATGRVRPWEILAITFTNKAAGE 117 Query: 257 MDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLE-NDTAARHELFIAEWR- 312 M ER+ + + + TFH+ + I++ ++ + I DTA L + Sbjct: 118 MRERVETLVGNAAKYMWVSTFHSSCVRILRAEAETLGITRSFSIYDTADTKALLTRIIKG 177 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 + K+ K + ++ V F AE Sbjct: 178 RGLDPKRFTPKSFAARISNAKNELVEPATF----------------------------AE 209 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRF 427 M +AP++I +L A + ++ L+ NA DF LI + + + + ++ Sbjct: 210 M--AAPDKIS-------QLTAEIYAEYQQLLRRANAFDFDDLIAEVVYLWRRHPEILAKY 260 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQ-------------NSQTTLFAVGDDWQAIYR 474 ++++LVDE+QD +P + L+ L + + L VGD Q+IY Sbjct: 261 RDKFRYVLVDEYQDTNPAQYQLVRLLARDPLGDPRLDGALGAHPGAGLTVVGDSDQSIYA 320 Query: 475 FSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGD 534 F GA + F ++F L+ YR I VAN I +N G+ KK L + Sbjct: 321 FRGATIRNIEEFEQDFPGATTVYLEQNYRSTGTILSVANAIISENSGRHKKNLWTEAGDG 380 Query: 535 KKAVTLLDESQLD 547 KA+ +++ D Sbjct: 381 PKAIMFAADTERD 393 >UniRef50_Q67LG5 ATP-dependent DNA helicase n=1 Tax=Symbiobacterium thermophilum RepID=Q67LG5_SYMTH Length = 671 Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 108/363 (29%), Positives = 164/363 (45%), Gaps = 35/363 (9%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNPAQ A ++ + LLV+AGAG+GKT R LLARG PE ++ + F KAA E Sbjct: 11 LNPAQRAAALHQDGPLLVIAGAGAGKTRTATHRLACLLARG-VPPEAVMCITFTNKAARE 69 Query: 257 MDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M +R + + + RTFH+ A+ +++Q P + + T A + +A ++ Sbjct: 70 MRDRAVALVGADARRVMIRTFHSAAMVLLRQYIGDFPESGRTPSFTVADPTIQLALLKEA 129 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLA---SRLDRWVSLMRMHGGAQA 371 +E+ K R PE W + + LA S L R S M Sbjct: 130 IAERNFDLKANR-----------PESFLWRIGRYKNELADPESLLARQPSHDLMDWSRVL 178 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISP- 430 EMI S D + R L A + K ++ L+ + VDF LI+ + +L + I Sbjct: 179 EMIRST-----DRYVNR--LTAEIWKRYEEKLRRNDMVDFDDLINLFVQMLREKPDIRAD 231 Query: 431 ----WKHILVDEFQDISPQRAAL--LAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 + ++ VDEFQD + + + L A ++QN + AVGDD Q+IY + A + Sbjct: 232 LQRRFTYLQVDEFQDTNVAQLHMVKLLAGKRQN----VMAVGDDAQSIYSWRSADIRCIL 287 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDES 544 F +F L+ YR I ANR I N GQ K L + + V E+ Sbjct: 288 EFERHFPGARTILLEQNYRSTGAIIRAANRLIAHNAGQRPKRLFTAAPEGRPVVAHEAET 347 Query: 545 QLD 547 ++D Sbjct: 348 EVD 350 Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 13/70 (18%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + TIH++KG + V +VG+++G + A E +E EERRL YV Sbjct: 574 VKLQTIHSAKGLEYPVVFVVGMEQGLLPYQRALEEGNLE-------------EERRLCYV 620 Query: 649 ALTRARHRVW 658 A+TRAR ++ Sbjct: 621 AITRAREELY 630 >UniRef50_Q1Q555 Similar to DNA helicase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q555_9BACT Length = 641 Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 104/352 (29%), Positives = 168/352 (47%), Gaps = 44/352 (12%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 S LN Q AV+ + LLVLAG GSGKTSVL R +L + + +IL L F KAA Sbjct: 5 SSLNENQREAVLWDKGPLLVLAGPGSGKTSVLTHRIARILEQSKGQHFRILALTFTNKAA 64 Query: 255 EEMDERIRERLHTEDITAR--TFHALALHIIQQGSKKV---PIVSKLENDTAARHELFIA 309 E+ R+ + + E R TFH+ A ++QQ + P L ND Sbjct: 65 AEVRGRVEKLVPGELSRVRLTTFHSYAAELLQQHGNHLSFRPDFQILSND---------- 114 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 ++++A L ++M +S+P + + +L + L++ + + Sbjct: 115 ------ADREALLDDVLGRLRKDMAYSLP--DHFKAAQLLPAVTRLLEQCIPPDQAAVVL 166 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFI- 428 Q + +A +A + A++ AL N++DF LI +++ +L+K F+ Sbjct: 167 QQANVENAIP------------LARVYAAYREALHLTNSLDFPSLIAESLDLLDKYPFLV 214 Query: 429 ----SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 +KHIL+DEFQD + + +L+ L Q +TLF V DD Q IY+++GA Sbjct: 215 KHIRKVYKHILIDEFQDTNHSQYRILS-LIAQPDPSTLFVVADDDQIIYQWNGASPERIK 273 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQL--KKPLNSLTNGD 534 A ++FG E L YR + E+AN I++N + KKPL ++ G+ Sbjct: 274 ALRDDFGVSE-LQLPENYRCPPLVIELANALIEKNLNRSAGKKPLKAVKQGE 324 >UniRef50_C7H111 ATP-dependent DNA helicase PcrA n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H111_9FIRM Length = 753 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 101/409 (24%), Positives = 179/409 (43%), Gaps = 63/409 (15%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q + V E LLVLAGAGSGKT ++ R +L+ P+ IL + F KAA E Sbjct: 17 LNDMQKQGAVTTEGPLLVLAGAGSGKTKMMTHRMAYLILEKNVDPQNILAVTFTNKAANE 76 Query: 257 MDERIRERLHT-----EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 M +R +H+ + + +TFHA L I++ + + TA+ + + Sbjct: 77 MKQRAEFLIHSRGRSLKGLWIKTFHATCLAILKNHAGALGYGENFLIYTASDQKAAVKRA 136 Query: 312 RKQC--SEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 K+C S K+ K + ++++ + Sbjct: 137 IKECEISPKEYPVKMFTSFISKCKSQKI-------------------------------- 164 Query: 370 QAEMIASAPEEIRDLF--SKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK--- 424 P+E+ D F S + ++ + +A++ LKA NA+DF L+ +++ K Sbjct: 165 -------VPDEVFDYFDDSFKTQISQQVYEAYQNVLKANNAMDFDDLLLNTVILFSKYPD 217 Query: 425 --GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + +K+I+VDE+QD S + L+ L + + VGDD Q IY + GA + Sbjct: 218 ILKIYAERFKYIMVDEYQDTSSLQFELINKL--AHVHKNICVVGDDDQCIYEWRGATIEN 275 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL-NSLTNGDKKAVTLL 541 +F + + + L+ YR I + A+ I N + +K L G+K ++ + Sbjct: 276 ILSFEKVYKGTKIIKLERNYRSTKNILDAAHAVISNNSKRKEKKLWTGSVEGEKISIEVY 335 Query: 542 DESQLDA--LLDKL----SGYAKPEERILILARYHHMRPASLEKAATRW 584 + + +A ++DK+ + K + I IL R ++ + E+A RW Sbjct: 336 ENAHAEAEFIVDKIRQAVAEEGKTYKDIAILYR-NNSQSRLFEEALKRW 383 >UniRef50_Q72IS0 DNA helicase uvrD n=3 Tax=Thermus thermophilus RepID=Q72IS0_THET2 Length = 692 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 104/345 (30%), Positives = 156/345 (45%), Gaps = 43/345 (12%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 +PLN AQ +AV++ E LV+AGAGSGKT +V R +L+AR P +IL + F KAA Sbjct: 7 APLNEAQRQAVLHFEGPALVVAGAGSGKTRTVVHRVAYLVARRGVFPSEILAVTFTNKAA 66 Query: 255 EEMDERIRERL-HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EEM ER+R + ++ TFHA AL I++ ++V + R + + Sbjct: 67 EEMRERLRGLVPGAGEVWVSTFHAAALRILRVYGERVGL----------RPGFVVYDEDD 116 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 Q + K K E+ S G + + LDR + G + Sbjct: 117 QTALLKEVLK--------ELALSARPGP----------IKALLDR----AKNRGVGLKAL 154 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG----RFIS 429 + PE L R + +L ++ ALKA+ A+DF ++ A+ +LE+ R + Sbjct: 155 LGELPEYYAGLSRGR---LGDVLVRYQEALKAQGALDFGDILLYALRLLEEDEEVLRLVR 211 Query: 430 P-WKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 + I VDE+QD SP + L + L AVGD Q IY F A + F Sbjct: 212 KRARFIHVDEYQDTSPVQYRFTRLL--AGEEANLMAVGDPDQGIYSFRAADIKNILDFTR 269 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNG 533 ++ E L+ YR I AN I +N +L+K L + G Sbjct: 270 DYPEARVYRLEENYRSTEAILRFANAVIVKNALRLEKALRPVKRG 314 >UniRef50_C7MAK0 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria RepID=C7MAK0_BRAFD Length = 932 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 107/375 (28%), Positives = 161/375 (42%), Gaps = 56/375 (14%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNPAQ AV + LL++AGAGSGKT VL R LL EA P +IL + F KAA E Sbjct: 122 LNPAQREAVEHRGSPLLIVAGAGSGKTRVLTRRIAHLLHSREALPGEILAITFTNKAAAE 181 Query: 257 MDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK- 313 M ER+ E + + TFH+ + I+++ + + S +A I K Sbjct: 182 MRERVGELVGPVARSMWVSTFHSACVRILRRDAAAAGLKSSFTIYDSADSLRLITTIAKD 241 Query: 314 -QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 Q KK + ++ L+ L +D Sbjct: 242 LQLDTKKHAPRALASRIS----------------SLKNDLVDPID--------------- 270 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISP-- 430 A E ++ F + +A + + L+ NAVDF LI + +L + I Sbjct: 271 -FADQAESAKNPFER---TLAQIYTNYTERLRQANAVDFDDLIGLTVTLLRENPAIREGY 326 Query: 431 ---WKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 ++H+LVDE+QD + + L+ L + +L VGD Q+IY F GA + F Sbjct: 327 RRRFRHLLVDEYQDTNTAQYQLVRELVGDDPHASLTVVGDSDQSIYAFRGATIRNIIEFE 386 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL---DES 544 ++F L+ YR I AN I++N G+ KK L + G+ + +TL DE Sbjct: 387 QDFPSARTIVLEQNYRSTQNILAAANSVIEENEGRRKKNLWT-DQGEGEQITLYVADDEQ 445 Query: 545 --------QLDALLD 551 Q+DAL+D Sbjct: 446 AEARYIGRQIDALVD 460 >UniRef50_C8WBZ1 UvrD/REP helicase n=7 Tax=Alphaproteobacteria RepID=C8WBZ1_ZYMMN Length = 768 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 106/359 (29%), Positives = 167/359 (46%), Gaps = 56/359 (15%) Query: 185 YADFFRQVESSP-----LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEA 239 Y+ F + P LNP Q V E +LLVLAGAG+GKT+ L AR +L+ +A Sbjct: 6 YSSFPAETPPEPDYLARLNPEQKEVVRTTEGALLVLAGAGTGKTAALTARLAYLVETLKA 65 Query: 240 SPEQILLLAFGRKAAEEMDERIRERLHTEDITA---RTFHALALHIIQQGSKKVPIVSK- 295 P QIL + F KAA EM R+ + L ++ TFH++A ++++ ++ V + S Sbjct: 66 WPSQILAVTFTNKAAREMQMRVGDLLGSQAENMPWLGTFHSIAAKMLRRHAELVGLKSDF 125 Query: 296 --LENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLA 353 L+ D R ++ Q +G +E QW ++LA Sbjct: 126 IILDTDDQIR-----------LLKQLIQGQG-----IDEKQWPA------------KQLA 157 Query: 354 SRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSG 413 +DRW + G + IA E D F+ A L A++ L + NA DF Sbjct: 158 GIIDRW-----KNRGLTPDKIAGKEE---DSFAD--GQGAALYLAYQKRLLSLNACDFGD 207 Query: 414 LIHQAIVILEKGR-----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDD 468 L+ +VIL + R + +++I+VDE+QD + + L L ++N + VGDD Sbjct: 208 LLLHMLVILTQHREVLDSYHDRFRYIMVDEYQDTNQAQYLWLRLLAQKNR--NICCVGDD 265 Query: 469 WQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 Q+IY + GA+++ F E+F + L+ YR +I A+ I N +L K L Sbjct: 266 DQSIYSWRGAEVANILRFEEDFPGAKIIRLEHNYRSTPQILGAASGLITHNNARLGKTL 324 Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 20/98 (20%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 +I MT+HA+KG + D+V + G +EG FP+ + ++E L +E EERRL Y Sbjct: 559 KITLMTMHAAKGLEFDHVFLPGWEEGV--FPS---QRSLDEGGLNSLE-----EERRLAY 608 Query: 648 VALTRAR----------HRVWALFNKENPSPFVEILKN 675 V +TRA+ RV+ + PS F+ L + Sbjct: 609 VGITRAKKCCTIFHAANRRVYGQWIASTPSRFISELPD 646 >UniRef50_A6VEA1 ATP-dependent DNA helicase Rep n=102 Tax=Proteobacteria RepID=A6VEA1_PSEA7 Length = 706 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 102/362 (28%), Positives = 161/362 (44%), Gaps = 61/362 (16%) Query: 188 FFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLL 247 FR S LNP Q AV LLVLAGAGSGKTSV+ + +L+ + + I+ + Sbjct: 32 LFRPAPMSRLNPRQQEAVNYVGGPLLVLAGAGSGKTSVITRKIAYLVQQCGIRAQYIVAV 91 Query: 248 AFGRKAAEEMDERIRERLHTED---ITARTFHALALHIIQQGSKKVPIVSKLENDTAARH 304 F KAA EM ER+ L + +T TFH L L+II++ +++ Sbjct: 92 TFTNKAAREMKERVGSLLRGGEGRGLTVSTFHNLGLNIIRKEHERL-------------- 137 Query: 305 ELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRL------DR 358 G++ P + +D+ ++ L + D Sbjct: 138 -------------------GYK-----------PGFSIFDESDIKALLTDIMQKEYSGDD 167 Query: 359 WVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQA 418 V ++ + GA + E + + R + A + ++ L+A NAVDF LI Q Sbjct: 168 GVDEIKNYIGAWKNDLILPEEALEKARNPREQTAAIVYLHYQRTLRAYNAVDFDDLILQP 227 Query: 419 IVIL-EKGRFISPW----KHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIY 473 + + E + W +++LVDE+QD + + L+ L K +Q T+ VGDD Q+IY Sbjct: 228 VKLFQEHPDILQKWQNRVRYMLVDEYQDTNASQYLLVKLLVKDRAQFTV--VGDDDQSIY 285 Query: 474 RFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL-NSLTN 532 + GA+ E+F + L+ YR SRI + AN I NP +K L + + + Sbjct: 286 AWRGARPENLMQLKEDFPSLKVVMLEQNYRSTSRILKCANVLIANNPHVFEKQLWSEMGH 345 Query: 533 GD 534 GD Sbjct: 346 GD 347 Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust. Identities = 29/76 (38%), Positives = 37/76 (48%), Gaps = 19/76 (25%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLP---PVEDFPDAEERRL 645 + MT+HASKG + YV I+G MEE +LP +E EERRL Sbjct: 590 VQMMTLHASKGLEFPYVFIMG----------------MEEEILPHRSSIEADTVEEERRL 633 Query: 646 MYVALTRARHRVWALF 661 YV +TRAR + F Sbjct: 634 AYVGITRARQNLAMTF 649 >UniRef50_A6GG96 UvrD/REP helicase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GG96_9DELT Length = 693 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 104/351 (29%), Positives = 164/351 (46%), Gaps = 44/351 (12%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 S LNPAQ AV++ E LLVLAGAGSGKT V+ R L+ G PE+I+ L+F KAA Sbjct: 4 SSLNPAQREAVLHTEGPLLVLAGAGSGKTRVITHRIARLMELG-TQPEEIVALSFTNKAA 62 Query: 255 EEMDERIRE---RLHTEDITARTFHALALHIIQQGSKKVPIVSKLEN-DTAARHELFIAE 310 EEM ER+ + R + + TFH+L ++++ K + + + D + + A Sbjct: 63 EEMRERLAKMVGRAKAKALVLGTFHSLGARMMREDPKGFEVPPRFQILDQGDVNGIVRAL 122 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 R+ + K W ++ V + W ++ L A+ + R VS Sbjct: 123 LREYGFHGGSAKKRW------DINAIVQRISLWKNDFLS---AAEVKRKVS--------- 164 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KG 425 ++ +EI A L +A+ L+A AVDF L+ + ++L+ K Sbjct: 165 ----SNDYDEI----------AAELYEAYDDRLRALAAVDFDDLVCRIALMLQDNPLTKK 210 Query: 426 RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 R+ ++++LVDE+QD + + +L L ++ L VGDD QAIY + GA+++ Sbjct: 211 RWRRRFRYLLVDEYQDTNTAQFQMLLELLGEDQ--NLCVVGDDDQAIYGWRGAKVANILG 268 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKK 536 F F + L+ YR I AN I N + K L G +K Sbjct: 269 FDLYFRNAKVIKLEANYRSRPPITTCANAVIAHNTSRHDKELVPQRTGGEK 319 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 8/71 (11%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESI-MEEALLPPVEDFPDAEERRLMY 647 I T H+SKG + V I+G++EG+ P ++ + +A+ +E EERRL Y Sbjct: 559 ITLSTFHSSKGLEWSQVFIIGVEEGT--LPHKRTDAPRLSDAIAGDLE-----EERRLFY 611 Query: 648 VALTRARHRVW 658 V +TRAR R+W Sbjct: 612 VGITRARDRLW 622 >UniRef50_Q4A5L9 Atp-dependent helicase n=2 Tax=Mycoplasma synoviae 53 RepID=Q4A5L9_MYCS5 Length = 734 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 96/353 (27%), Positives = 162/353 (45%), Gaps = 56/353 (15%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV + L ++AGAG+GKT VL + +L+ + P +IL + F KAA+E Sbjct: 13 LNEKQREAVEYFDSHLRIIAGAGTGKTKVLTRKILYLILEKKVDPSKILAVTFTNKAAKE 72 Query: 257 MDERIRERLHTEDIT----ARTFHALALHIIQQG------SKKVPIVSKLENDTAARHEL 306 M +RI + + + T H+ ++++ S+ PI+ +L+ + +L Sbjct: 73 MKDRINSKYYDKQKVLFENVFTLHSFCAQVLRKYINLIGFSRNFPILDELDKKQVLQ-DL 131 Query: 307 FIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMH 366 ++ + + + + ++++ W+ + N D Q+ L + L++ S Sbjct: 132 YV---KNKITNHEVSYSNMAKYIS----WA--KNNLLD----QKDLIAELEKQFS----- 173 Query: 367 GGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE--- 423 G A ++ IA +++ + MA KGAL DF LI +LE Sbjct: 174 GDAVSKTIA-------NVYQDYLNYMAE-----KGAL------DFDDLILHCKTLLEMHP 215 Query: 424 --KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMS 481 + + +ILVDEFQD S + +L + ++SQ T+ VGD Q IY + GA + Sbjct: 216 NVAAKIARYFNYILVDEFQDTSDLQFDILEKIIDKSSQLTI--VGDPDQTIYNWRGASVD 273 Query: 482 LTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGD 534 L F F + LDT YR +I AN+ I+ N + K L +TN D Sbjct: 274 LILNFENIFENSKTIVLDTNYRSTKKILASANKLIKNNKNRFSKDL--ITNND 324 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/78 (42%), Positives = 41/78 (52%), Gaps = 14/78 (17%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFP-------AAARESIMEEALLPPVEDFPDAE 641 + MTIHASKG + D V IVGL EG FP A + + L +E E Sbjct: 562 VSLMTIHASKGLEFDNVFIVGLTEGV--FPNYKHLEDAKENKHKTKTELNKGIE-----E 614 Query: 642 ERRLMYVALTRARHRVWA 659 ERRL YVA+TRAR ++ Sbjct: 615 ERRLAYVAITRARKNLFV 632 >UniRef50_B0MU18 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B0MU18_9BACT Length = 813 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 99/346 (28%), Positives = 159/346 (45%), Gaps = 43/346 (12%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN AQ AVVN + L++AGAGSGKT VL +R +++ +G A P IL L F KAAE+ Sbjct: 9 LNQAQRDAVVNYDSPSLIIAGAGSGKTRVLTSRIAYMIEQGVA-PYNILALTFTNKAAEQ 67 Query: 257 MDERIRERL---HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 M ERI + L I TFH++ I++ ++++ + F Sbjct: 68 MRERIAQMLPDGRHRYIRMGTFHSVFSRILRDNAERIGF-----------PQSFTIYEPS 116 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 C ++ V E N D + LASR+ + + + GA Sbjct: 117 DCKNL--------------LKTIVKELNLDDTKYKPAMLASRISYAKNCL-VTPGAYLAN 161 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRFI 428 +A E+ R +I + + K A+DF L+ Q ++L R+ Sbjct: 162 AGAAAEDRR----MQIPEFGNIYNIYCARCKRNGAMDFDDLLLQTNILLRDCPDVTARYQ 217 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 +K+ILVDE+QD + + ++ L + +S+ + VGDD Q+IY F GA++ +F + Sbjct: 218 EQFKYILVDEYQDTNYAQYVIIRRLSQLHSKVCV--VGDDAQSIYSFRGAKIENILSFKK 275 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGD 534 +F L+ YR I E AN I++N +++K + GD Sbjct: 276 DFPNAMIFKLEQNYRSTRTIVEAANSVIERNSKRMEK--KCFSEGD 319 >UniRef50_D1VUE5 ATP-dependent DNA helicase PcrA n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUE5_9FIRM Length = 720 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 92/339 (27%), Positives = 159/339 (46%), Gaps = 47/339 (13%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q A++ E LL+LAGAGSGKT V+ ++ +L+ E +IL + F KAA E Sbjct: 6 LNDKQKEALLYNEGPLLILAGAGSGKTKVVTSKIAYLI-ENEVPSWRILAITFTNKAARE 64 Query: 257 MDERIRERLHTEDITAR---TFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 M ER+ L ED++ TFHA+ + I+++ + + S A I E K Sbjct: 65 MRERV-AMLIDEDVSPMWIGTFHAICVRILRKNIENLGYGSNYNIYDRADQNTIIKESYK 123 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 + + + +E+ S R + S++ W + +E+ Sbjct: 124 ELN------------INKEIYNS-------------RTILSKISSW----KNEELTPSEV 154 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRFI 428 + E+I + + +I + ++ LK NA+DF L+ + + +L + + Sbjct: 155 LDGNKEDIFNFNAGKI------YEFYQNKLKENNALDFDDLLIKTVELLREFPDVREFYQ 208 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 + +K+I VDE+QD + + L+ + T+ VGD+ Q+IY++ GA +S F + Sbjct: 209 NKFKYIFVDEYQDTNSIQYKLIKLFCGKAPNLTV--VGDNDQSIYKWRGADISNILNFQK 266 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 +F + L+ YR I +VAN I+ NP +L K L Sbjct: 267 DFPGAKIIKLEQNYRSTQNILDVANSVIKNNPQELSKSL 305 >UniRef50_B3QYS3 UvrD/REP helicase n=9 Tax=Chlorobiaceae RepID=B3QYS3_CHLT3 Length = 765 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 94/358 (26%), Positives = 162/358 (45%), Gaps = 49/358 (13%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN Q +AV + ++++AGAGSGKT V+ R +++ + +P QIL L F KAA Sbjct: 21 SLNTEQKKAVETTKGPVMIIAGAGSGKTRVITFRIAYIINKENCAPNQILALTFTNKAAN 80 Query: 256 EMDERIRERLHTEDITA---RTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM R+ E L T TFH+ +++Q + ++ S + ++ A+ Sbjct: 81 EMRSRVEEILGTGSTRGLWIGTFHSNFARLLRQHADRLGFTSD--------YTIYDADDS 132 Query: 313 KQCSEKKAQAKGWRQWLTE-EMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 K +Q +TE + V N +Q +++ +R V+ +M A Sbjct: 133 KNL---------IKQIITELGIATDVLAPN-----AVQGKISMAKNRLVTPEQMSQNAS- 177 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GR 426 D S++ A + + L+ NA+DF L+ + I + + Sbjct: 178 -----------DFISEK---TAEVFYKYNERLQKNNALDFDDLLIKPIKLFNEHPEILAH 223 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + +++I++DE+QD + RA + A + VGDD Q+IY + GA ++ F Sbjct: 224 YQERFQYIMIDEYQDTN--RAQYIVAKMLAGQHRNICVVGDDAQSIYSWRGADIANILGF 281 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDES 544 ++ E C L+ YR I +VAN I N QL+K L + +N + VTL + + Sbjct: 282 QNDYKEATICRLEENYRCTKTILKVANTVISNNKEQLEKTLYT-SNETGEPVTLFEAT 338 >UniRef50_A9M0G6 ATP-dependent DNA helicase n=38 Tax=Betaproteobacteria RepID=A9M0G6_NEIM0 Length = 690 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 101/386 (26%), Positives = 164/386 (42%), Gaps = 61/386 (15%) Query: 177 YTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLAR 236 ++ A T DF + LNP Q AV LLVLAGAGSGKT V+ + +L+ Sbjct: 3 HSTASKTAQTDFRQHQNMMKLNPQQLEAVRYLGGPLLVLAGAGSGKTGVITQKIKYLIVN 62 Query: 237 GEASPEQILLLAFGRKAAEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPI- 292 P + + F KAA EM ER+ + LH T +T TFH+L + I+++ + + Sbjct: 63 VGYLPHTVAAITFTNKAAAEMQERVAKMLHKSQTRGLTICTFHSLGMKILREEANHIGYK 122 Query: 293 --VSKLENDTAAR--HELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKL 348 S L++ +A+ EL ++ + + Q W+ L N W+ + Sbjct: 123 KNFSILDSTDSAKIIGELLGGTGKEAVFKAQHQISLWKNDLKTPEDVVQTASNAWEQQ-- 180 Query: 349 QRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENA 408 A + +++ L++ A Sbjct: 181 -------------------------------------------TARVYASYQETLQSYQA 197 Query: 409 VDFSGLIHQAIVILEKGRFI-SPW----KHILVDEFQDISPQRAALLAALRKQNSQTTLF 463 VDF LI V+L++ + + W +++LVDE QD + + L+ L ++ Sbjct: 198 VDFDDLIRLPAVLLQQNSEVRNKWQRRLRYLLVDECQDTNTCQFTLMKLL--TGAEGMFT 255 Query: 464 AVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQL 523 AVGDD Q+IY + GA M EN+ + + L+ YR +RI ++AN+ I+ NP Sbjct: 256 AVGDDDQSIYAWRGANMENLRKMQENYPQMKVIKLEQNYRSTARILKIANKVIENNPKLF 315 Query: 524 KKPL-NSLTNGDKKAVTLLDESQLDA 548 K L + L G+ V Q +A Sbjct: 316 TKKLWSKLGEGEPVKVVACQNEQHEA 341 Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 19/72 (26%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLP---PVEDFPDAEERRL 645 + T+HA+KG + YV +VG +EG +LP +E+ EERRL Sbjct: 566 VSLSTLHAAKGLEYPYVFLVGCEEG----------------VLPHNDSIEEGNVEEERRL 609 Query: 646 MYVALTRARHRV 657 MYV +TRA+ ++ Sbjct: 610 MYVGITRAKRQL 621 >UniRef50_A7HBX8 UvrD/REP helicase n=7 Tax=Cystobacterineae RepID=A7HBX8_ANADF Length = 745 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 114/395 (28%), Positives = 168/395 (42%), Gaps = 60/395 (15%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q V G+ +LV+AGAGSGKT L R LLA G ASPE ILLL F KAA+E Sbjct: 36 LNDQQIAVVEAGDGPILVVAGAGSGKTRTLTWRVARLLAEG-ASPESILLLTFTNKAAQE 94 Query: 257 MDERIRE--RLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M R+ E RL T IT TFH H+ Q + E + Sbjct: 95 MLRRVGEVCRLDTRQITGGTFH----HVAHQ---------------------LLREHGGE 129 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 +K + R+ ++ M ++ + + R + D + L+ M Q + Sbjct: 130 LGYRKGYSILDREDSSDVMSAAIADCGL----AVGARRFPKADVLIDLVSMAVNTQTPLA 185 Query: 375 ASAPEEIRDLFSKRIKLMAPLLK-----AWKGALKAE--NAVDFSGLIHQAIVILEKGRF 427 D+ + R PL A + A + NA+DF L+ ++L + Sbjct: 186 --------DVLADRRPQFVPLTDDVLRVARRYAERKHELNAMDFDDLLLNWKILLAEREA 237 Query: 428 I-----SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + ++H+LVDE+QD + + ++ + ++ L VGDD Q+IY F GA + Sbjct: 238 VRRAVAGRYRHVLVDEYQDTNRLQGDVVDLVAGEHR--NLCVVGDDAQSIYAFRGAHFAN 295 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSL-TNGDKKAVTLL 541 F + + + R DL YR +I +AN I N Q +K L S+ +G AV Sbjct: 296 ILEFEKRYPDARRYDLTVNYRSTPQILGLANASIAANVRQFEKELTSVRPDGTLPAVVPC 355 Query: 542 DESQLDALLD-----KLSGYAKPEERILILARYHH 571 E Q A +L P I +L R HH Sbjct: 356 REVQQQAAFVAQRVLELRDEGIPLPEIAVLYRAHH 390 >UniRef50_A6DNQ6 UvrD/REP helicase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DNQ6_9BACT Length = 645 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 103/341 (30%), Positives = 161/341 (47%), Gaps = 51/341 (14%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q +AV + LL+LAGAG+GKT L R L+ G +IL+L F RKAAEE Sbjct: 3 LNPQQEKAVQHKTGPLLLLAGAGTGKTHTLCCRVAKLIQSG-VPAHKILMLTFTRKAAEE 61 Query: 257 MDERIRERLHTED--ITARTFHALALHIIQQGSKKVPIVSKLEN--DTAARHELFIAEWR 312 M +RI +RL +D + A TFH++A + + K + I++ L D ++ + E + Sbjct: 62 MKQRI-DRLMDQDCPVLAGTFHSIAFNDL----KNLGILNNLSGIFDDTSQAKFIRKELK 116 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 K+C E + R++ M++ N ++E + +A+ W+S +E Sbjct: 117 KKCFE-AISSYSPREF----MRFFSLCTNTMEEEI--KIIAAHFPSWLS--------HSE 161 Query: 373 MIASAPEEIRDLFSKRIKLMA----PLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFI 428 +I + + KL A +L W AL+ N L Q Sbjct: 162 LIHKLKA---NYCQHKNKLKAYDYDDILCTWSKALEGPNL----SLAQQC---------- 204 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 ++ILVDE+QD S + +L L KQ+ + AVGDD Q+IY F GA + F Sbjct: 205 ---EYILVDEYQDTSKLQIDILKKLCKQHD--NIMAVGDDCQSIYSFRGALPEQISQFSL 259 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS 529 +F + L+ YR +I + AN+ + G ++K L S Sbjct: 260 DFTGAQSLTLEENYRSTQQILDFANKSMLMAKGVIQKKLRS 300 >UniRef50_UPI0000E87DAA UvrD/REP helicase n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87DAA Length = 725 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 109/385 (28%), Positives = 172/385 (44%), Gaps = 53/385 (13%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV + S L+LAGAGSGKT VL +R WL+ ASP IL + F KAA+E Sbjct: 16 LNLKQQEAVTLSDQSALILAGAGSGKTKVLTSRFAWLIQNQIASPGGILAVTFTNKAAKE 75 Query: 257 MDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M RI +L + + TFH L +++ + + I + Sbjct: 76 MLVRISAQLPINPRGMWVGTFHGLCNRFLKKHYQDASLPQ-------------IFQILDS 122 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 +K A + ++ +E +F +++ L ++G + + Sbjct: 123 ADQKSAIKRVMKKMNIDE--------DFLPSKEV-------------LYFINGNKEEGVR 161 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFI-----S 429 ++A + D+ K+ + KA++ E VDF+ L+ + + + + I S Sbjct: 162 SNAYKAFDDISEKK----NAIYKAYEDQCLKEGVVDFAELLLRCLELFQNKPMIREHYQS 217 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 +KHILVDEFQD S + L L +NS +FAVGDD Q+IY F GA+ ++ Sbjct: 218 IFKHILVDEFQDTSKLQYEWLKLLTAKNS--FIFAVGDDDQSIYGFRGARPGNMKDLQKD 275 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL-NSLTNGD--KKAVTLLDESQL 546 F L+ YR + I AN I+ N +L K L + +GD ++ L D + Sbjct: 276 FKINNIIKLEQNYRSKNNILNAANAIIENNADRLGKNLWSEAGDGDLIRQYNALDDRFET 335 Query: 547 DALLDKLSGYAKPEER---ILILAR 568 +LD++ G + R I IL R Sbjct: 336 SYILDEIKGLHRSGSRYDQIAILYR 360 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 30/70 (42%), Positives = 39/70 (55%), Gaps = 12/70 (17%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + MTIH+SKG + D V I GL+EG S+ E L EERRLMYV Sbjct: 561 LQLMTIHSSKGLEFDTVFITGLEEG----LCPHERSLSENNGLE--------EERRLMYV 608 Query: 649 ALTRARHRVW 658 A+TRAR +++ Sbjct: 609 AVTRARQKLY 618 >UniRef50_D0RN21 ATP-dependent DNA helicase PcrA n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RN21_9RICK Length = 742 Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 100/358 (27%), Positives = 163/358 (45%), Gaps = 63/358 (17%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + LN Q AV N E L VLAGAGSGKT VL +R +L+ + + +QIL + F KAA Sbjct: 6 NSLNNQQKLAVSNTEGPLQVLAGAGSGKTKVLTSRIAYLIQQKKCFGQQILCVTFTNKAA 65 Query: 255 EEMDERIRERLHTEDIT---ARTFHALALHIIQQGSKKV------PIVSKLENDTAARHE 305 EM ER+ + ++++ + TFH++ ++++ S+ V I+ L+ Sbjct: 66 SEMRERVLKLVNSKSVAFPWLGTFHSICNKMLRKNSEAVGLKPNFTIIDTLD-------- 117 Query: 306 LFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRM 365 Q K + L+ E N + +++A +D+W + Sbjct: 118 ---------------QIKLIKNILSAE--------NIDIKKNPPKQIAFYIDQWKNK--- 151 Query: 366 HGGAQAEMIASAPEEIRDLFSKRIKLMAPL--LKAWKGALKAENAVDFSGLIHQAIVILE 423 A PE+++ L ++ L+ L K ++ L N VDF LI + IL+ Sbjct: 152 ---------ALLPEQVK-LKNQEFNLVNALKVYKIYQKKLLVMNCVDFGDLILHVVTILK 201 Query: 424 KGRFISP-----WKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGA 478 K I +K+ILVDEFQD + + L L + + + VGDD Q+IY + GA Sbjct: 202 KFEDIKKIYQRNFKYILVDEFQDTNYVQNFWLQLLTSE--KKNICVVGDDDQSIYSWRGA 259 Query: 479 QMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL-NSLTNGDK 535 ++ F N+ + L+ YR I A I N +L+K + + L +G+K Sbjct: 260 EVKNILEFKNNYQNTQTIKLEQNYRSTENILNSATSLISNNEDRLEKNIWSELGDGEK 317 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 10/78 (12%) Query: 584 WPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEER 643 W +I+ MTIH++KG + D V + G +EG FP + ++E +E EER Sbjct: 539 WDGEKINIMTIHSAKGLEFDAVFLPGWEEGL--FP---HQKSIDEKGADGIE-----EER 588 Query: 644 RLMYVALTRARHRVWALF 661 RL YVA+TRA+ ++ F Sbjct: 589 RLAYVAITRAKKELFISF 606 >UniRef50_D1KF50 SRS2 n=6 Tax=rosids RepID=D1KF50_ARATH Length = 1147 Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 103/363 (28%), Positives = 164/363 (45%), Gaps = 30/363 (8%) Query: 204 AVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRE 263 A N L+V+AG GSGKTS +V R LL G P IL + F + A EM ERI + Sbjct: 255 ACSNISTPLMVIAGPGSGKTSTMVGRVLVLLNEG-LLPSNILAMTFTKAATSEMRERIGK 313 Query: 264 ---RLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE-WRKQCSEKK 319 + +DIT TFH+ +L + + + K+ S+ + I E R EKK Sbjct: 314 SAGKKAAKDITISTFHSFSLQLCRMHADKLQRTSEFSVYGHGQQRRAIIEAVRLYEEEKK 373 Query: 320 AQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPE 379 +K + E G + + L+ + ++V+ Q + +PE Sbjct: 374 NGSKTSVPCESGEGLNGAGAGAVCPE--YAKDLSKKWQKFVT--------QGKASGKSPE 423 Query: 380 EIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFI-----SPWKHI 434 + R + ++ + A +L + LKA +A+D+ LI ++ +L + WK I Sbjct: 424 QCRKMGNE---IGAKILGNYNDILKACDALDYHDLISCSVTLLSDFPEVFKECQDTWKAI 480 Query: 435 LVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGE 494 +VDEFQD S + LL L N T VGDD Q+I+ F+GA S +F +F + Sbjct: 481 IVDEFQDTSTMQYKLLRMLGSHNHITI---VGDDDQSIFGFNGADSSGFDSFRRDFPNYK 537 Query: 495 RCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL----DESQLDALL 550 L YR + I E A+ I+ N + + S N +T+ +E+Q ++ Sbjct: 538 EVRLIKNYRSSRHIVEAASSIIKNNTKRCQSKSISSENSQGSKITVKECHNEEAQCAYVI 597 Query: 551 DKL 553 DK+ Sbjct: 598 DKI 600 >UniRef50_C6CW81 UvrD/REP helicase n=2 Tax=Bacillales RepID=C6CW81_PAESJ Length = 692 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 102/373 (27%), Positives = 174/373 (46%), Gaps = 66/373 (17%) Query: 173 HNQAYTEAMLTEYAD----FFRQVESSP--LNPAQARAVVNGEHSLLVLAGAGSGKTSVL 226 H A T L +D +FR +E+ LN Q AV + + +L LAGAGSGKTSVL Sbjct: 29 HASADTSEQLVSPSDKDAFYFRALENQGIRLNQRQISAVRHIDGPILTLAGAGSGKTSVL 88 Query: 227 VARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLH-----TEDITARTFHALALH 281 V R G++L+ P+Q+LL+ F +KAA+EM RI + + I ARTFH+ L Sbjct: 89 VCRTGYMLSVRGIPPQQLLLMTFSKKAADEMKLRISQLPNIGQGAASRIEARTFHSFCLL 148 Query: 282 IIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGN 341 ++++ K I+ + R +++ +++ E+ L E Q PE Sbjct: 149 MLRRRGYKQNILGE-----TGRKQIY---FKRLLRERN---------LHETYQ---PE-- 186 Query: 342 FWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIA--SAPEEIRDLFSKRIKLMAPLLKAW 399 +L+ + + +MIA PE+ + +++KL+ + W Sbjct: 187 -------------------TLITLLSSYKMQMIAVPDLPEKSEE--ERQLKLIFTSYEEW 225 Query: 400 KGALKAENAVDFSGLIHQAIVILEKGRFI-----SPWKHILVDEFQDISPQRAALLAALR 454 K L + +D+ ++ +A +L++ + + ++++++DEFQD + + ++ L Sbjct: 226 KRQL---DLIDYDDMLLEAYQLLKQDENLLAMLQNRFRYVMIDEFQDTNTIQYEIIKLLV 282 Query: 455 KQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANR 514 + L VGDD Q IY F+GA+ F + F + LD YR S I + N Sbjct: 283 Q--PHRNLMVVGDDDQTIYSFNGARNDYILNFEKQFPGAKNIILDVNYRSGSGIVGLGNA 340 Query: 515 FIQQNPGQLKKPL 527 I+ N + K L Sbjct: 341 VIRHNKQRRSKTL 353 Score = 42.7 bits (99), Expect = 0.041, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 34/134 (25%) Query: 546 LDALLDKLSGYAKPEERIL--------ILARYHHMRPASLEKAATRWPKLQIDFMTIHAS 597 L +LD+L AK + I I A++ M+ L+ + ++FMTIH S Sbjct: 549 LKEMLDELEASAKRFDGITAFLAFIDEIAAKHEEMKRMKLDSSNAD----AVNFMTIHKS 604 Query: 598 KGQQADYVIIVGLQEG-------------SDGFPAAARESIMEEALLPPVEDFPDAEERR 644 KG + V + G+ EG SD A +++ E A+ EERR Sbjct: 605 KGLEFPVVFVCGVSEGILPHSSAITAEKNSDRSAIQAGDNVGEAAM---------EEERR 655 Query: 645 LMYVALTRARHRVW 658 L YVA+TRA ++ Sbjct: 656 LAYVAVTRAEEELY 669 >UniRef50_C9XK50 ATP-dependent DNA helicase n=5 Tax=Clostridium RepID=C9XK50_CLODC Length = 762 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 87/347 (25%), Positives = 156/347 (44%), Gaps = 48/347 (13%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 R + LNPAQ AV E +L+LAGAGSGKT VL R +L+ IL + F Sbjct: 7 RNMNLDTLNPAQREAVEKTEGPVLILAGAGSGKTKVLTTRIAYLIEDKGVQAPNILAITF 66 Query: 250 GRKAAEEMDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 KAA EM ER+ + + T+D+ TFH+ + I+++ K+ Sbjct: 67 TNKAANEMRERVEQNIGPETKDMWISTFHSCCVRILRKDINKI----------------- 109 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 G+ + + S + D + L+ ++ +++ Sbjct: 110 ----------------GYNRSFV--IYDSADQVTLVKDCLKELNLSDKVFEPKAVISAIS 151 Query: 368 GAQAEMIASAPEEIRD--LFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG 425 GA+ ++ P++ +D + R+ +A + ++ LK +A+DF LI + + + + Sbjct: 152 GAKDKLY--TPKQFKDINMADNRMVKIADIYALYQDRLKRNSALDFDDLILKTVELFKAN 209 Query: 426 R-----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQM 480 + S +++I+VDE+QD S + L+ L +++ + VGDD Q+IY + GA + Sbjct: 210 DEVLAYYRSRFRYIMVDEYQDTSKAQYELIKLLAREHQN--ICVVGDDDQSIYGWRGADI 267 Query: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 F +++ L+ YR I + AN+ I N + +K L Sbjct: 268 RNILEFEKDYDNVHVVKLEQNYRSTQVILDAANKVISNNIERKRKKL 314 Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 10/71 (14%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 ++ MTIH SKG + V + G++EG FP + M ++ + EERRL Y Sbjct: 570 RVSLMTIHTSKGLEFPVVFLTGMEEGL--FPISRAIKSMSDSQIE--------EERRLCY 619 Query: 648 VALTRARHRVW 658 V +TRA+ ++ Sbjct: 620 VGITRAKEELY 630 >UniRef50_C0VSX9 ATP-dependent DNA helicase n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VSX9_9CORY Length = 735 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 93/340 (27%), Positives = 158/340 (46%), Gaps = 48/340 (14%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 S LNP Q AV++ + LL++AGAGSGKT+VL R LL P QIL + F KAA Sbjct: 8 SDLNPQQRDAVLHDDSPLLIVAGAGSGKTAVLTRRIAHLLRFKGVQPWQILAITFTNKAA 67 Query: 255 EEMDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 +EM ER+ + E ++ TFH+ + I+++ ++ VP ++ + ++ ++ Sbjct: 68 KEMQERVIGLIGPEAQNMAVATFHSTCVRILRRNAQLVPGLN-------SNFTIYDSD-- 118 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 +K Q + ++M + + + R L +++ W + E Sbjct: 119 --------DSKRLLQQIAKDMDLDIKKFS-------PRVLGNKISGW----------KNE 153 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPW- 431 +I D K K++ + ++ L+ NA+DF LI + + I + ++ + Sbjct: 154 LIGV------DDAVKEHKVIGQVYGFYQERLRRANALDFDDLIGEVVRIFREHPDVTAYY 207 Query: 432 ----KHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 +H+LVDE+QD + + ++AL ++ T L VGD Q+IY F GA + F Sbjct: 208 RRRFRHVLVDEYQDTNHAQYEFISALVGKDG-TGLCVVGDADQSIYAFRGATIRNIREFE 266 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 +F L+ YR I AN I N + KK L Sbjct: 267 RDFPNATTILLEQNYRSTQNILSAANAVISHNEHRGKKNL 306 >UniRef50_Q5WF16 UvrD/REP family ATP-dependent DNA helicase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WF16_BACSK Length = 763 Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 94/349 (26%), Positives = 156/349 (44%), Gaps = 54/349 (15%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 L+ AQ +AV + + LL+LAGAG GKT VL ARA ++++ P ++ L+ F KAA+E Sbjct: 148 LDDAQWKAVKHIDGPLLLLAGAGCGKTRVLTARAAYMISEANIHPNKMALVTFTAKAAQE 207 Query: 257 MDERIRER-----LHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 M ER+ E + + + RTFH+L ++ ++W Sbjct: 208 MRERMTEYPGIEPMFAQSLLIRTFHSLFYTMLVHADP--------------------SKW 247 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 K G T+ + E F D+ A+++ W + Sbjct: 248 HG----SKLIKSGQELLKTQGRALGLDESEFPYDQA-----ATQISWW----------KN 288 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----R 426 MIA E D F ++ L L + ++ AL+ DF + + +L++ R Sbjct: 289 HMIAPEHVETTDPFEEKAAL---LYEHYEKALRETGRFDFDDMQLGCLYVLQENNRLLQR 345 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + + ++L+DEFQDI+P + ++ L Q + VGDD Q+IYRF G+ +F Sbjct: 346 YQERFAYLLIDEFQDINPVQFEIVKLLAM--PQRNICVVGDDDQSIYRFRGSDPRFIRSF 403 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDK 535 ++ E + L YR + I ANR I +N +L+K L + D+ Sbjct: 404 TAHYPEAKTIHLVENYRSSHPIIASANRVIAENRTRLEKTLVAQHTSDQ 452 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 36/76 (47%), Positives = 42/76 (55%), Gaps = 14/76 (18%) Query: 582 TRWPKLQIDFMTIHASKGQQADYVIIVGLQEGS---DGFPAAARESIMEEALLPPVEDFP 638 TR PK I +TIH SKG + +V IVG EGS D A RE +D P Sbjct: 674 TRHPK-SIQLLTIHRSKGLEFSHVFIVGAVEGSLPHDYALDAWREG----------DDGP 722 Query: 639 DAEERRLMYVALTRAR 654 EERRLMYVA+TRA+ Sbjct: 723 LQEERRLMYVAMTRAK 738 >UniRef50_B2A3D2 UvrD/REP helicase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A3D2_NATTJ Length = 754 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 97/335 (28%), Positives = 151/335 (45%), Gaps = 55/335 (16%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q AV LL++AGAG+GKT LV R +LL G P++ILLL F RKAA E Sbjct: 118 LNPQQLEAVTYCNGPLLIIAGAGTGKTRTLVYRVSYLLESG-IPPQEILLLTFTRKAARE 176 Query: 257 MDERIRERLHTED---ITARTFHALALHIIQQGSKKV---PIVSKLEN-DTAARHELFIA 309 M ER+++ L TE I TFH+ A +++++ S V P S L+ D+ +L Sbjct: 177 MLERVKKLLGTESTDRIKGGTFHSFANNVLRRYSGLVGLSPDFSVLDQIDSQDVVDLLRT 236 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 E+ EK K +R ++ Sbjct: 237 EYDFHRQEKAFPKK---------------------------------ERIFEIISKSRNT 263 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFIS 429 Q + EE L I + + +A+ + N +DF L+ +V+ + R S Sbjct: 264 QKSIGQVISEEFSGL-DDYIDEIDTIAQAYHKYKRHYNLMDFDDLL---LVLRDNLRDNS 319 Query: 430 PWK--------HILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMS 481 ++ +ILVDEFQD + + ++ L Q+ T+ VGDD+Q+IY F GA Sbjct: 320 TFRKQLSSELSYILVDEFQDTNVVQNEIVNLLGSQSRNITV--VGDDFQSIYAFRGANWE 377 Query: 482 LTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFI 516 F +N+ + + L+ YR +++I + AN + Sbjct: 378 NILLFPQNYPDAKLIKLEKNYRSHNKILKFANEIV 412 >UniRef50_A6GBC2 UvrD/REP helicase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GBC2_9DELT Length = 683 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 103/351 (29%), Positives = 160/351 (45%), Gaps = 57/351 (16%) Query: 197 LNPAQARAVVNGEHS-LLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNP Q RAVV +LVLAGAG+GKT L R L+A G PE+I+L+ F +AA Sbjct: 21 LNPQQ-RAVVEAPAGKILVLAGAGTGKTRTLTYRVAKLVA-GGCQPERIMLVTFTNRAAR 78 Query: 256 EMDERIRERLHTEDI---TARTFHALALHIIQQGSKKV---PIVSKLENDTAARHELFIA 309 EM R+ E L T D+ + TFH + I+++ + V P L+ + Sbjct: 79 EMVHRV-ESLLTIDMRRSASGTFHHVGNRILRRYGEAVGLGPDFGILDPE---------- 127 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 A+ + E+ +V + D ++ ++AS+ Sbjct: 128 -----------DARDLMGSVVSELGMAVLTSKRFPDARVLTKIASQ-------------- 162 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPL---LKAWKGALKAENAVDFSGLIHQAIVILEKGR 426 A M+ + P I F++ + L+AP+ L +K + N VDF L+ + +L + Sbjct: 163 AAGMLGTIPAVIERRFTRFLDLVAPIDKVLADFKERKRRLNMVDFDDLLSYWLELLRDPK 222 Query: 427 FIS-------PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQ 479 S W H+LVDE+QDI+ + A++ + + + +L VGDD Q+IY F GA Sbjct: 223 HASVAEQLRGQWDHMLVDEYQDINVLQGAIIDEMARDHG--SLTCVGDDAQSIYSFRGAD 280 Query: 480 MSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSL 530 S F E + L YR +I +ANR I +N Q K L ++ Sbjct: 281 FSQIYDFRIRHKEAQVLPLTINYRSTPQILSLANRSIARNREQHPKELTAV 331 >UniRef50_C6JPT7 DNA helicase II n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JPT7_FUSVA Length = 945 Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 92/344 (26%), Positives = 160/344 (46%), Gaps = 58/344 (16%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q A + E LLV+AG GSGKT LV R +L + SPE+I++ F +A++E Sbjct: 8 LNKEQKEAATHIEGPLLVIAGPGSGKTRTLVERVVHMLIEKKISPEKIMVSTFTDRASKE 67 Query: 257 MDERIRER-------LHTEDITARTFHALALHIIQQG------SKKVPIVSKLENDTAAR 303 + RI ER ++ DI T H++ L +I + S+ ++ +LE Sbjct: 68 LIGRISERIKDCDSKININDIYMGTLHSICLRLIDEYIEYSDFSEGYQVLDELE------ 121 Query: 304 HELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLM 363 FI K+ E +G+ ++ E +P N W A ++ +WV+ + Sbjct: 122 QHFFIFSKIKEFKE----IEGYNEFFKE-----IPAANNWGK-------AGKIQKWVNRI 165 Query: 364 RMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGL---IHQAIV 420 G + + +++ K+I+ + + ++ L +N +DF+ + I++ ++ Sbjct: 166 NEEG--------RSLDYVKEEQDKKIEFLKKAHELYQKLLIEDNVIDFASIQREIYKMLL 217 Query: 421 ----ILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFS 476 +LE+ R ++I++DE+QD + + ++ L ++ + VGDD Q IYRF Sbjct: 218 NNDTVLEEIR--EKIQYIMIDEYQDTNSIQEKIIFEL--GGNRKNICVVGDDDQGIYRFR 273 Query: 477 GAQMSLTTAFHENFGEGERC---DLDTTYRFNSRIGEVANRFIQ 517 GA + F F E E C LD YR + I NR+I Sbjct: 274 GASVKNILEFPNKFDENE-CRIITLDINYRSHKDIITFCNRWIN 316 >UniRef50_A4RXK7 Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RXK7_OSTLU Length = 657 Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 93/356 (26%), Positives = 155/356 (43%), Gaps = 76/356 (21%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV+ + VLAG GSGKT VL+ R L+ + P +IL + F KAA E Sbjct: 1 LNDDQRAAVLAPVGATRVLAGPGSGKTHVLIGRVAHLIHELKTPPREILCITFTNKAARE 60 Query: 257 MDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 + ER+R+++ +ITA TFH++A ++++ ++P + + ++ A+ K Sbjct: 61 LRERLRDKIGDAAAREITAGTFHSVAARMLRRHGDRIPGIGR-----TGEFTIYDADDSK 115 Query: 314 QC-----------SEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSL 362 Q ++K AQ R W++ +P + +R+V Sbjct: 116 QIVQGVLVNKFGETKKTAQPGPMRNWISTSKSCPIPPMSH--------------ERFVE- 160 Query: 363 MRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVIL 422 ++ L+ NA DF L+ + +L Sbjct: 161 --------------------------------CYDEYELGLRQANAFDFDDLLSATVAML 188 Query: 423 E-----KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSG 477 E + + W +LVDEFQD S + L+ L + Q ++F VGD QAIY + G Sbjct: 189 EMCPDVRSYYEHRWSQVLVDEFQDTSTTQYELIRKLSQ--PQGSVFVVGDADQAIYGWRG 246 Query: 478 AQMS-LTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTN 532 A+++ + T F E+F + + L T YR + I E A I+++ PL+ + N Sbjct: 247 AEVANIRTQFDEDFKDVQTHMLTTNYRSTATIVEAAQAVIKES--AFPSPLDLVAN 300 >UniRef50_A8SUE8 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A8SUE8_9FIRM Length = 789 Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 91/340 (26%), Positives = 155/340 (45%), Gaps = 48/340 (14%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q +A + + LL+LAGAGSGKT V+ R +L+ +P IL + F KAA E Sbjct: 20 LNDMQQQACEHVDGPLLILAGAGSGKTRVITHRVAYLMDHEGVNPLNILAITFTNKAARE 79 Query: 257 MDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M +R+ + + + TFH+L + I+++ + K+ + I + Q Sbjct: 80 MRDRVDLIVGEGADRVWVSTFHSLCVRILRRYADKIGYEKNFD----------IYDSDDQ 129 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 S K+ K +F D K R+ M M ++A+ Sbjct: 130 KSTVKSILK-----------------DFQIDPK----------RYPEKMFMSEISKAKEK 162 Query: 375 ASAPEEI--RDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RF 427 +P+E R+ +A + ++G LK NA+DF LI++ + + E + Sbjct: 163 YMSPDEFARRNAADYAATKVAEVYTEYQGRLKKNNAMDFDDLIYKTVELFEHNPDVLDTY 222 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + +++I+VDE+QD + + ++ L ++ L VGDD Q+IY+F GA ++ F Sbjct: 223 QNRFRYIMVDEYQDTNHIQFLMVKMLARK--YRNLCVVGDDDQSIYKFRGANITNILNFE 280 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 + + + + L+ YR I AN IQ N G+ K L Sbjct: 281 KEYEDAKVIKLEQNYRSCGNILAAANAVIQHNEGRKDKAL 320 >UniRef50_B8GFE8 UvrD/REP helicase n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GFE8_METPE Length = 1019 Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 102/366 (27%), Positives = 164/366 (44%), Gaps = 62/366 (16%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNPAQ AV N + L+LAG GSGKT V+ + LL G P +IL L F KAA E Sbjct: 3 LNPAQQTAVENA-GTQLILAGPGSGKTRVITEKILHLLDHG-VPPTEILALTFSEKAAAE 60 Query: 257 MDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCS 316 M++RI + D+ TFH+ L ++Q ++S N Sbjct: 61 MNDRIEMKRPNLDLEIHTFHSFCLEVLQDN-----MLSSGLN------------------ 97 Query: 317 EKKAQAKGWRQWLTEEMQWSVPEGNFWDDE--KLQRRLASRLDRWVSLMRMHGGAQAEMI 374 G T ++ W + + +D E KL A ++ + + + E+I Sbjct: 98 -----VSGGVISRTSQLVWGLQHIDIFDFEHIKLGNNAADVIEAVIDGI---SAFRDELI 149 Query: 375 ASAPEEIRDLFSKRIKL------------MAPLLK---AWKGALKAENAVDFSGLIHQAI 419 AP+E+ D +++ + + LLK A++ + N +DF +IH A+ Sbjct: 150 --APDELDDYLTQKQSVQVEEAEQEYLLQLGDLLKVYRAYEQYKRERNLIDFDDMIHGAV 207 Query: 420 VILE-----KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYR 474 + + + S +++ILVDEFQD + + L+ + +N L VGDD Q IYR Sbjct: 208 TLFRSDPALRSSYRSRFRYILVDEFQDTNYAQLQLIKEIAGEN----LCVVGDDDQTIYR 263 Query: 475 FSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGD 534 F GA ++ F + LD YR + + +A + + PG+ +K L + GD Sbjct: 264 FRGAYLTNIRDFKQWAATHTETLLDQNYRNSGAVLSLALQVMAGAPGRREKALFT-EKGD 322 Query: 535 KKAVTL 540 + VT+ Sbjct: 323 GEPVTV 328 >UniRef50_A9KP66 UvrD/REP helicase n=12 Tax=Bacteria RepID=A9KP66_CLOPH Length = 807 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 93/346 (26%), Positives = 156/346 (45%), Gaps = 53/346 (15%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q RAV + +L+LAGAGSGKT VL R +L+ +P QI+ L F KAA+E Sbjct: 7 LNPEQRRAVEHDRGPMLILAGAGSGKTRVLTHRIAYLIEERNVNPYQIMALTFTNKAAKE 66 Query: 257 MDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M ER+ + + E+I TFH+ + I+++ FI Sbjct: 67 MRERVDKIVGYGAENIWVSTFHSTCVRILRR---------------------FI------ 99 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFW---DDEKLQRRLASRLDRWVSLMRMHGGAQA 371 E + + + T++ + + E + D ++ + R+ + A+ Sbjct: 100 --ETLGYDRNFTIYDTDDQKTLIREVLKFLQIDTKQTKERV---------FLSAISSAKD 148 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR----- 426 E I+ E+ L ++ + K ++ LK NA+DF LI + + + + Sbjct: 149 EGISPEEFELSALGDYNKMKISNVYKEYQRRLKTNNALDFDDLIMKTVELFQSNTEALNY 208 Query: 427 FISPWKHILVDEFQDISPQRAALLA----ALRKQNS-QTTLFAVGDDWQAIYRFSGAQMS 481 + + +++I+VDE+QD + + L+ +L + N + L VGDD Q+IY+F GA + Sbjct: 209 YRNRFRYIMVDEYQDTNTIQFKLIRLLAHSLNEYNEVEHNLCVVGDDDQSIYKFRGANIR 268 Query: 482 LTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 F + F + L+ YR I AN I N G+ K L Sbjct: 269 NILDFEKEFPDAVVIKLEQNYRSTKNILNAANEVIHNNLGRKDKSL 314 >UniRef50_D1R4U3 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4U3_9CHLA Length = 677 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 110/417 (26%), Positives = 181/417 (43%), Gaps = 90/417 (21%) Query: 193 ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 E LNP+Q AV + +L+LAGAGSGKT VL R +L++ ASP+ IL L F K Sbjct: 8 ELDALNPSQRAAVTTTDGRVLILAGAGSGKTKVLTVRMAYLMSIKGASPKSILGLTFTNK 67 Query: 253 AAEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIA 309 AA EM RI + I+ TFH+ + I++ A H+L Sbjct: 68 AAAEMRHRIGAFAAPHIAKQISLCTFHSFCMQILR----------------AEIHKL--- 108 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLA----------SRLDRW 359 G+ P+ + +D++ +QR + + L Sbjct: 109 --------------GY-----------TPQFSLYDEKDVQRLIGLIARDVLEHEAELPSL 143 Query: 360 VSLMRMHGGAQAEMIASAPEEIRDLFSK-RIKLMAPLLKAWKGALKAENAVDFSGLIHQA 418 S + AQ + +AS EEI D S+ + + + + +L+A NAVDF+ L+ Sbjct: 144 ASTTAVINQAQNKGLAS--EEICDTGSEWHDEFARTIYQRLQASLRAYNAVDFNNLLGLT 201 Query: 419 IVILEK-----GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIY 473 + + E ++ +++I++DE+QD +P + L + L ++ L VGDD Q+IY Sbjct: 202 VQLFENFPDVLEKYQERYRYIMIDEYQDTNPVQYKLASLLSRK--YQNLCVVGDDDQSIY 259 Query: 474 RFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL-NSLTN 532 + GA++ +F + L+ YR + I + AN I N + +K L ++ Sbjct: 260 GWRGAEVKNIL----DFSDATTIKLEQNYRSTNNILKAANGVISHNQTRYQKVLWSNRGE 315 Query: 533 GDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 GD L++ + EE ++ R HMR EK +W + I Sbjct: 316 GD--------------LIEVFHAPSDKEEAEAVVYRIAHMR----EKYQLKWRDIAI 354 >UniRef50_B7GHR4 Superfamily I helicase domain and RecB family exonuclease domain n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GHR4_ANOFW Length = 965 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 89/339 (26%), Positives = 155/339 (45%), Gaps = 48/339 (14%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q + V E LL++AG GSGKT LV R +++ +PE IL+ F KAA E Sbjct: 5 LNKQQKQVVHTTEGPLLIIAGPGSGKTFTLVERIKYIITTKNVNPENILVATFTEKAASE 64 Query: 257 MDERIRERLHTEDITAR-------TFHALALHIIQQGSKKVPIVSKLENDTAARHELFIA 309 + RI RL+ E+I+ T H++ L I+++ + ++L+ + + Sbjct: 65 LLTRISNRLNEENISINLNEMYIGTIHSICLRILEENRE----YTRLKKNYRVLDQFDQQ 120 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 Q +K Q G+ + VPE +L +W + G Sbjct: 121 YLIYQNIKKFTQIPGF--------ELIVPE---------------KLSKWHQAQTVLGWV 157 Query: 370 QAEMIASAPEEIRDLFSKR---IKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG- 425 + +IR L S + I+++A + K + L ENA+DFS + + + +L+ Sbjct: 158 NK--LTEELVDIRKLESSQDNVIRILAEIYKTYLDILARENALDFSTIQSETVHLLKNNP 215 Query: 426 ----RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMS 481 + ++++DE+QD + + L+ L ++ + VGDD Q +YRF GA + Sbjct: 216 DVLTKLQEKIHYLMIDEYQDTNTVQEELIFLL--AGNRQNICVVGDDDQGLYRFRGATIR 273 Query: 482 LTTAFHENFGEG--ERCDLDTTYRFNSRIGEVANRFIQQ 518 F + F +G ++ L T YR + I E NR++++ Sbjct: 274 NILEFPKKFPKGVCQKVKLSTNYRSHPTIIEFYNRWMEE 312 >UniRef50_D2NR24 Superfamily I DNA and RNA helicase n=17 Tax=Bacteria RepID=D2NR24_9MICC Length = 985 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 102/374 (27%), Positives = 159/374 (42%), Gaps = 63/374 (16%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV++ LL++AGAGSGKT VL R +LLA A+P QIL + F KAA E Sbjct: 143 LNERQEEAVLHSGSPLLIVAGAGSGKTRVLTHRIAYLLATHRATPGQILAITFTNKAAAE 202 Query: 257 MDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKL----ENDTAARHELFIAE 310 M ERI + + + TFH+ + ++++ + + + S D+ L I E Sbjct: 203 MRERIEALVGPRAKHMWISTFHSFCVRVLRREAAALGLKSTFTIYDSTDSQRLLSLIIKE 262 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 + A+A G R S + E R+AS Sbjct: 263 LNLDTKKFTAKAVGNR--------ISALKNELVSAEAYASRVAS---------------- 298 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISP 430 P E K +A + + L+A N++DF LI + + +L+K I+ Sbjct: 299 -----DNPYE---------KTIAQIYTVYTQRLRAANSLDFDDLIGRTVFLLKKFPEIAN 344 Query: 431 W-----KHILVDEFQDISPQRAALLAALRKQNSQTT--------------LFAVGDDWQA 471 + +HILVDE+QD + + L+ L + + L VGD Q+ Sbjct: 345 YYRRKFRHILVDEYQDTNHAQYQLVRELVGAHVKAPADRGPYPDAVPPAELTVVGDSDQS 404 Query: 472 IYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLT 531 IY F GA + T F +++ L+ YR I AN I++NP + K L + + Sbjct: 405 IYAFRGADIRNITDFEKDYPNAHTILLEQNYRSTQNILSAANAVIERNPDRRPKKLWTAS 464 Query: 532 NGDKKAVTLLDESQ 545 K + + ES+ Sbjct: 465 GAGAKIIGYVAESE 478 >UniRef50_A5UVF1 ATP-dependent DNA helicase, Rep family n=6 Tax=Chloroflexi (class) RepID=A5UVF1_ROSS1 Length = 659 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 110/407 (27%), Positives = 176/407 (43%), Gaps = 71/407 (17%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q AV +LV AGAGSGKT VL R +L+ SP IL L F KAA E Sbjct: 12 LNPEQRTAVAAPPGPILVRAGAGSGKTRVLTLRIAYLIVEHGVSPSNILALTFTNKAARE 71 Query: 257 MDERIRER--LHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M +R+R+ + +TA TFH++ ++++ I ++ + TA + I +Q Sbjct: 72 MRQRLRDMPGVSIRGLTAGTFHSVCASVLREH-----IAGRIGSYTA---DFTIYAEDEQ 123 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 A R+ ++ PE L+R A++ ++ Sbjct: 124 VHLASAALDAARERPPALLE---PE---------------------ELLRHISRAKSRLL 159 Query: 375 AS--APEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLI---------HQAIVILE 423 A RD + + +A + ++ +L+ NA+DF LI H ++ Sbjct: 160 TPRLAARFARDDLA---RFVAGCYQRYQRSLERANALDFDDLILLTHRLFSEHPDVLDAC 216 Query: 424 KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQT----TLFAVGDDWQAIYRFSGAQ 479 + R W+H+L+DE+QD P + AL+ L + + +LFAVGD QAIY F A Sbjct: 217 QSR----WRHVLIDEYQDTDPAQHALVELLTRPSPANGGVRSLFAVGDGMQAIYGFRNAD 272 Query: 480 MSLTTAFHENFGEGERCDLDTTYRFNSRIGEVA------NRFIQQNPGQLKKPLNSLTNG 533 ++ + F +F + +L T YR I + A +R +Q + KP G Sbjct: 273 HTIISRFERDFPDARVIELATNYRSRQPILDAAYAVIRHSRTVQPMALRATKPETPRGVG 332 Query: 534 DKKAVTLLD--------ESQLDALLDKLSGYAKPEERILILARYHHM 572 + ++D E ++ D L +P+E I +L R HM Sbjct: 333 YTSPLQIVDAKDARDEAERVARSIADLLRQGRRPQE-IAVLYRSRHM 378 >UniRef50_C6D4S8 ATP-dependent DNA helicase PcrA n=46 Tax=Firmicutes RepID=C6D4S8_PAESJ Length = 785 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 92/340 (27%), Positives = 158/340 (46%), Gaps = 49/340 (14%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q AV + LL++AGAGSGKT VL R +L+ + +P IL + F KAA E Sbjct: 14 LNPPQRDAVQATDGPLLIMAGAGSGKTRVLTHRIAYLIEKKRVAPWSILAITFTNKAARE 73 Query: 257 MDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M R+ + +DI TFH++ + I+++ ++ S I + Q Sbjct: 74 MQARVAALIGPTGQDIWVSTFHSMCVRILRRDIDRIGFTSNFS----------ILDSADQ 123 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 S + K E+ V + ++ + +Q ++ GA+ E+I Sbjct: 124 LSVIRNCMK--------ELNIDVKK---FEPKAVQAEIS--------------GAKNELI 158 Query: 375 ASAPEEIR--DLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----F 427 E + D F+ ++A + K ++ LK+ N++DF LI I + ++ + Sbjct: 159 TPERYEQKTGDYFT---DIVAKVFKMYQKRLKSNNSLDFDDLIMTTIQLFKEMPEVLEFY 215 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + +++I VDE+QD + RA + + + VGD Q+IYR+ GA ++ F Sbjct: 216 QNKFRYIHVDEYQDTN--RAQYMLCRMLADKHHNICVVGDSDQSIYRWRGADITNILNFE 273 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 +++ E L+ YR ++ I E AN I+ N G+ K L Sbjct: 274 DDYPEARTIMLEQNYRSSANILEAANAVIKLNTGRKPKKL 313 >UniRef50_Q6ZHK2 Os07g0492100 protein n=4 Tax=Poaceae RepID=Q6ZHK2_ORYSJ Length = 1165 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 99/355 (27%), Positives = 160/355 (45%), Gaps = 40/355 (11%) Query: 212 LLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRE---RLHTE 268 L+++AG GSGKTS +V R LL + E P IL + F AA EM +RI + + Sbjct: 303 LMIVAGPGSGKTSTMVGRVLTLL-KEEFPPSNILAMTFTTAAASEMRDRIGTVVGKAVAK 361 Query: 269 DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQW 328 +I TFH+ L + + ++K+ R FI Q +++A + R Sbjct: 362 EIVISTFHSFCLQLCRTHAEKL-----------GRTSEFIIYGNGQ--QRRAVIEAER-L 407 Query: 329 LTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKR 388 L + + + N D ++ + +W + QA+ PEE + K+ Sbjct: 408 LESDKNNGLGDANKNCDGDIKNSFKDKAKKWQKFV-----TQAKASGRTPEE----YEKK 458 Query: 389 IKLM-APLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFI-----SPWKHILVDEFQDI 442 L A +L+ + L++ NA+D+ I+ +I +L K + + W+ I+VDEFQD Sbjct: 459 GDLTGASILRHYNEILRSCNALDYHDFINSSITLLTKFPEVYDECRNTWQAIVVDEFQDT 518 Query: 443 SPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTY 502 S + LL L N T VGD+ Q+I+ F+GA +S +F +F + L Y Sbjct: 519 SAMQYYLLKTLASHNRITI---VGDEDQSIFSFNGADVSGFDSFRRDFPNHKEVRLSKNY 575 Query: 503 RFNSRIGEVANRFIQQNPGQLKKPLNSLTN--GDKKAVTLL--DESQLDALLDKL 553 R I E A I N + L N G+K V ++SQ ++DK+ Sbjct: 576 RSTRAIVEAATALIHNNTKRQSHKLAETDNPSGNKIIVKECHSEDSQCAFVIDKI 630 >UniRef50_A1VZC5 ATP-dependent DNA helicase, putative n=30 Tax=Epsilonproteobacteria RepID=A1VZC5_CAMJJ Length = 676 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 103/370 (27%), Positives = 164/370 (44%), Gaps = 52/370 (14%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 S LN Q A LV+A AG+GKTS +VAR +LL++G A P++I+LL F KA+ Sbjct: 4 SKLNNEQYLAATADFGHNLVIASAGTGKTSTIVARISYLLSKGVA-PQKIMLLTFTNKAS 62 Query: 255 EEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 +EM R+ + T I A TFH+ A +++ K + + Sbjct: 63 KEMIGRLGKFFDKNITSKILAGTFHSTAYTLLRNADKNIAL------------------- 103 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVP---EGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 KQ SE K K + T + +D L + A D + + + Sbjct: 104 -KQASELKTLLKSVYEKRTFRHLSDIKPYQSSYLYDLYSLFQNKAHNQDFYTWFCQNY-- 160 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFI 428 + A E+I LK + K N VDF+ L+ +L++ ++ Sbjct: 161 EDQSIYAEIYEDI--------------LKEYDNEKKRFNYVDFNDLLINLKDLLKEEKY- 205 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 + ILVDE+QD + +++L+ A + +LF VGD Q+IY F+GA +++ F + Sbjct: 206 -EFDEILVDEYQDTNTLQSSLIEAFHSK----SLFCVGDYDQSIYAFNGADINIIGGFKD 260 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDA 548 F + + L+ YR + I +AN+ I N K L N + KA +LL + Sbjct: 261 RFKDVKIFSLNKNYRSSRSILALANKVILNNERLYPKELIVTRNDEFKAPSLL---TFEE 317 Query: 549 LLDKLSGYAK 558 L D+ AK Sbjct: 318 LFDQYQNIAK 327 >UniRef50_B5YF03 ATP-dependent DNA helicase PcrA n=2 Tax=Dictyoglomus RepID=B5YF03_DICT6 Length = 625 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 97/356 (27%), Positives = 155/356 (43%), Gaps = 66/356 (18%) Query: 187 DFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILL 246 DF ++ LN Q AV+ E +L+LAGAGSGKT V+ + +L+ A PE I+ Sbjct: 2 DFLKE-----LNKEQLEAVLEIERPVLILAGAGSGKTRVITYKIAYLIKNNIAKPENIVA 56 Query: 247 LAFGRKAAEEMDERIRERLHTED---ITARTFHALALHIIQQGSKKVPI----VSKLEND 299 L F KAAEEM +RI L +D + A TFH L++++ K + V END Sbjct: 57 LTFTNKAAEEMKKRINNMLGAKDADKVWAGTFHGFGLYLLKNFGKYWSLSPYFVIYDEND 116 Query: 300 TAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRW 359 E I + K + K ++ ++ +++ D+ Sbjct: 117 ----QEDLIKDILKDLNRAKD----------------------YNARDIKEKISRLKDQL 150 Query: 360 VSLMRMHGGAQAEMIASAPEEIRDLFSKRI-KLMAPLLKAWKGALKAENAVDFSGLIHQA 418 ++ P+E L S +++ + K ++ L+ NA+DF+ L+ + Sbjct: 151 IT----------------PQEFSSLISNSFDEIVLEVYKRYEKELRRNNALDFADLLLYS 194 Query: 419 IVILEK-----GRFISPWKHILVDEFQDISPQRAAL--LAALRKQNSQTTLFAVGDDWQA 471 I +L++ G +++LVDE+QD + + L + L KQ VGDD Q+ Sbjct: 195 IRLLQEKPAICGFLQDKIEYVLVDEYQDTNKAQYELFKIIVLDKQKFS----VVGDDDQS 250 Query: 472 IYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 IY F GA ++F L YR +I E+AN I N + K L Sbjct: 251 IYSFRGADYQNIFRLEKDFKNLRVIFLTKNYRSTQQILEIANVLIANNDKRYPKEL 306 Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 21/91 (23%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGS-DGFPAAARESIMEEALLPPVEDFPDAEERRLM 646 ++ +T+H+ KG + + V +VG++EG + A +E I EERRL Sbjct: 539 KVSLITLHSVKGLEFEVVFLVGMEEGILPHYNATTKEEIQ--------------EERRLC 584 Query: 647 YVALTRARHRVWALF------NKENPSPFVE 671 YV +TRA+ +++ + + PS F+E Sbjct: 585 YVGITRAKEKLYLSYAAKRYSRYQEPSRFLE 615 >UniRef50_C8PTM7 ATP-dependent DNA helicase PcrA n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PTM7_9SPIO Length = 809 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 100/345 (28%), Positives = 150/345 (43%), Gaps = 61/345 (17%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 S LNP Q AV + LL+LAGAGSGKT V+ + WL+A PE IL + F KAA Sbjct: 9 SVLNPEQLEAVCHTGSPLLILAGAGSGKTRVITTKIAWLIAEQGVRPESILAVTFTNKAA 68 Query: 255 EEMDERIR---ERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 EM ER R ER T RTFH+ ++++ AEW Sbjct: 69 REMAERARVLDER--TARSVIRTFHSFGAWMLRR----------------------YAEW 104 Query: 312 RKQCSEKKAQAKGWRQWLTEE----MQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 + + + E+ + ++P+ N + + R+++ D + + Sbjct: 105 -------AGLSPNFTIYDDEDSVTLLMKALPQLNKQEAQGFMRKISRAKDYCL----LPD 153 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRF 427 Q MI APE A + + ++ L+ DF LI + +L++ Sbjct: 154 SPQLVMIEPAPE------------FATIYRTYQQRLRETGNADFGDLIMLPVRLLQEHSA 201 Query: 428 IS-----PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 I+ +K ILVDE+QD + + LL L ++ T + VGDD Q+IYRF GA++ Sbjct: 202 IARQLHNRFKVILVDEYQDSNDAQFRLLRELTGED--TYVCVVGDDDQSIYRFRGAEVQN 259 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 F F + L YR I VA + +N G+L K L Sbjct: 260 ILTFDRQFPHTKIIRLVRNYRSYEPILRVAGSIVSRNEGRLGKTL 304 >UniRef50_UPI000051001F putative ATP-dependent DNA helicase II n=1 Tax=Brevibacterium linens BL2 RepID=UPI000051001F Length = 850 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 94/342 (27%), Positives = 152/342 (44%), Gaps = 47/342 (13%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q AV + LL++AGAGSGKT+VL R + LA G A P ++L + F KAA+E Sbjct: 26 LNPRQREAVAHTGSPLLIVAGAGSGKTTVLTRRIAYALATGRAHPGEVLAITFTNKAAKE 85 Query: 257 MDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M ER+R + + + TFH+ + I+++ +K + + S + + +++ K+ Sbjct: 86 MAERVRSIVGPASRAMWVSTFHSSCVRILRREAKVLGMKSNFTIYDSQDAQRLVSQILKE 145 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 +++ M + N +D + R Sbjct: 146 L------GIDTKKYTPRSMLHRI--SNLKNDLQTPDDFIPR------------------- 178 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVIL----EKGRFI-S 429 A+ P + +++A + K + L+ NA DF LI + + + E F Sbjct: 179 ANNPAD---------EVLADVFKRYTSRLRLANAFDFDDLISETVHLFGAFPEVADFYRR 229 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTT----LFAVGDDWQAIYRFSGAQMSLTTA 485 ++HILVDE+QD +P + AL+ AL + L VGD Q+IY F GA + Sbjct: 230 RFRHILVDEYQDTNPAQYALIKALAGDGAGGATGAELTVVGDSDQSIYAFRGATVRNIME 289 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 F ++F E L+ YR I + AN I N + K L Sbjct: 290 FEKDFPNAETILLEQNYRSTQNILDAANAVISNNQDRKDKKL 331 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 12/70 (17%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 Q+ MT+H +KG + V + GL++G GFP A + P E +EERRL Y Sbjct: 634 QVTLMTLHTAKGLEFPVVFLTGLEDG--GFPHA-------RSFENPSEL---SEERRLAY 681 Query: 648 VALTRARHRV 657 V LTRAR R+ Sbjct: 682 VGLTRARQRL 691 >UniRef50_B0SSS8 ATP-dependent DNA helicase PcrA n=6 Tax=Leptospira RepID=B0SSS8_LEPBP Length = 678 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 99/344 (28%), Positives = 147/344 (42%), Gaps = 54/344 (15%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN AQ AV + LLV AGAGSGKT V+ R ++ + +I+ L+F K+A+E Sbjct: 10 LNAAQMEAVSTIQGPLLVFAGAGSGKTRVITNRIAHMVEGVKIPASKIVALSFTNKSAKE 69 Query: 257 MDERIRERLHTED---ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 M ER+R+ + E IT TFH+L L I+++ K+ E F+++ K Sbjct: 70 MAERLRKMVPREKLKGITLSTFHSLGLKILKEHIGKLGYNETFLLFNGTDQEAFVSDLLK 129 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMH---GGAQ 370 D +K+ R R + ++H G Sbjct: 130 SKR--------------------------LDPKKVPPREILRRISYAKNTQVHPKDNGLT 163 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISP 430 E A E + PL ++ LK +NA+DF LI +L + I+ Sbjct: 164 GEFDLVAAE------------IFPL---YEDGLKEKNAIDFDDLILLPKRLLAEFPEIAA 208 Query: 431 W-----KHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 + ++ LVDEFQD + + L+ R + L VGDD Q+IY F G+ + L Sbjct: 209 YYQRKHEYFLVDEFQDTNQLQYEFLSLFR--GNSDNLCVVGDDDQSIYAFRGSNVQLILN 266 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS 529 F F + L YR S I + AN IQ N G+ +K L S Sbjct: 267 FEREFPHAKVVRLLENYRSTSLIIQAANSLIQNNIGRKEKTLYS 310 >UniRef50_A8HYL6 DNA helicase II n=8 Tax=Rhizobiales RepID=A8HYL6_AZOC5 Length = 835 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 111/357 (31%), Positives = 162/357 (45%), Gaps = 56/357 (15%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q AV + +LVLAGAG+GKT VL R +L++G A P QIL + F KAA E Sbjct: 72 LNPEQREAVETLDGPVLVLAGAGTGKTRVLTTRIAHILSQGRAYPSQILAVTFTNKAARE 131 Query: 257 MDERIRERLH--TEDIT-ARTFHALALHIIQQGSKKVPIVSK---LENDTAAR--HELFI 308 M ERI + E + TFH++ + I+++ + V + S L+ D R +L Sbjct: 132 MKERIHAMVGDTVEGMPWLGTFHSIGVRILRRHHELVGLKSGFTILDTDDQLRLLKQLIA 191 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 AE +E +W R LAS +D W + G Sbjct: 192 AEE------------------IDEKRWPA------------RMLASAIDGW-----KNRG 216 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK---- 424 E + + E + R ++ L A++ LKA NAVDF L+ + I + + Sbjct: 217 LTPEQVPAG--EGAAFANGRGQM---LYAAYQARLKALNAVDFGDLLLEGIRLFRENPDV 271 Query: 425 -GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 + +K+ILVDE+QD + + L L Q S+ VGDD Q+IY + GA++ Sbjct: 272 LAEYHRKFKYILVDEYQDTNVAQYLWLRLL-AQGSRNVC-CVGDDDQSIYGWRGAEVDNI 329 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLT-NGDKKAVT 539 F +F + L+ YR I A+ I N G+L K L S G+K VT Sbjct: 330 LRFESDFPGAKVIRLERNYRSTGHILAAASHLIAFNEGRLGKTLFSEGEKGEKVTVT 386 Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 20/102 (19%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + MT+H++KG + D V + G +EG FP + ++E +E EERRL YV Sbjct: 609 VQIMTLHSAKGLEFDTVFLPGWEEGL--FP---HQRALDEQGKAGLE-----EERRLAYV 658 Query: 649 ALTRAR----------HRVWALFNKENPSPFVEILKNLDVPV 680 +TRAR R+ ++N PS F++ L + V V Sbjct: 659 GITRARASARVYFASNRRIHGMWNSTVPSRFLDELPDTHVDV 700 >UniRef50_B1XW04 UvrD/REP helicase n=41 Tax=Bacteria RepID=B1XW04_POLNS Length = 788 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 102/356 (28%), Positives = 158/356 (44%), Gaps = 62/356 (17%) Query: 197 LNPAQARAVV------NGE-HSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 LNP Q AV NG+ S L+LAGAG GKT VL R WL+ G+ SP +L + F Sbjct: 9 LNPEQREAVTLPPVNENGQSQSALILAGAGGGKTRVLTTRIAWLIQTGQVSPIGVLAVTF 68 Query: 250 GRKAAEEMDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 KAA+EM R+ L +T + TFH L +++ K+ + S + Sbjct: 69 TNKAAKEMMLRLSAMLPINTRGMWIGTFHGLCNRLLRAHHKEAGLPSTFQ---------- 118 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 I + + Q S K KG + DDEK A +L +++ + G Sbjct: 119 ILDTQDQLSAIKRLLKGLK----------------VDDEKYP---AKQLQYFIAHAKERG 159 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRF 427 ++ + D F + MA L A+ + E VDF+ L+ ++ +L+ Sbjct: 160 QRAKDL------SVGDDFQAK---MAQLYAAYDEQCQREGVVDFAELLLRSYELLKHSEA 210 Query: 428 ISP-----WKHILVDEFQDISPQRAALLAALRKQNS---------QTTLFAVGDDWQAIY 473 I ++HIL+DEFQD + + A L L ++ +++FAVGDD Q+IY Sbjct: 211 IRTHYQERFRHILIDEFQDTNALQYAWLKLLSGHDASSINVSGMGSSSVFAVGDDDQSIY 270 Query: 474 RFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS 529 F GA + + + + L+ YR + I + AN I N +L K L + Sbjct: 271 AFRGADVENMRLYEKQY-HPLMVKLEQNYRSHGHILDTANHLIANNSERLGKNLRT 325 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 12/70 (17%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + MT+H++KG + V I GL+EG FP S+ E+ L EERRLMYV Sbjct: 578 VQLMTVHSAKGLEFTSVFITGLEEGL--FPH--ENSVNEQNGLE--------EERRLMYV 625 Query: 649 ALTRARHRVW 658 A+TRA+ R++ Sbjct: 626 AITRAKERLY 635 >UniRef50_Q256I8 DNA/RNA helicase n=17 Tax=Chlamydiales RepID=Q256I8_CHLFF Length = 636 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 100/360 (27%), Positives = 158/360 (43%), Gaps = 53/360 (14%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN AQ AV +LVLAGAG+GKT V+ R L+ G A P +IL + F KAA+E Sbjct: 6 LNEAQIAAVTAPLSPVLVLAGAGAGKTRVVTCRILHLIKEGIA-PREILAVTFTNKAAKE 64 Query: 257 MDERIRER---LHTEDI-TARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 + ERI + + DI TFH+L + I+++ + + EN+ + + Sbjct: 65 LKERILHQCPQVSGADIPMVCTFHSLGVFILRRSIQAL----NRENNFIIYDQSDTDKLL 120 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 KQC +K ++ L+ +Q+ + + + RL D Sbjct: 121 KQCLQKF----NLKKTLSSSIQYHISQA--------KNRLLYPEDL-------------- 154 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRF 427 PEE D + + K ++ LK NA+DF L+ + + + K + Sbjct: 155 ----DPEEYVDP-------VVSIYKEYQQRLKETNALDFDDLLFLTVKLFKDFPEVKKEY 203 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 WK +L+DE+QD + A + A +FAVGD Q+IY + GA + F Sbjct: 204 SELWKALLIDEYQDTN--HAQYMMAQTIAGKHQNIFAVGDPDQSIYSWRGANIHNILNFE 261 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLD 547 +++ + L+ YR I AN IQ N +LKK L S+ +K L ++ D Sbjct: 262 QDYPQARVLRLEENYRSYGNILNAANALIQNNASRLKKNLRSVKGPGEKIRVFLGKTDKD 321 >UniRef50_C0CLZ2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0CLZ2_9FIRM Length = 608 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 92/341 (26%), Positives = 156/341 (45%), Gaps = 53/341 (15%) Query: 198 NPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEM 257 NP+Q RA+ + ++VLAG GSGKTSV+V R +++ + IL++ F + AA EM Sbjct: 4 NPSQLRAIAHLSGPMMVLAGPGSGKTSVIVERTSYMIHHHQVPETGILVVTFSKAAAREM 63 Query: 258 DERIR--ERLHTEDITARTFHALALHIIQ--QGSKKVPIVSKLENDTAARHELFIAEWRK 313 ER E +T TFH + I++ G I+S+ + + F+ E + Sbjct: 64 KERFLRLENRSGSGVTFGTFHGVFYGILKCAYGLDARNILSE------EQKKQFLGELVE 117 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 Q E+ Q EG F ++ L R +S+++ G + E+ Sbjct: 118 QYGEELRQ-----------------EGEFLEE----------LGREISMVK---GNRVEL 147 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVIL-EKGRFISPWK 432 + D ++I L ++ +A +DF ++ +L E+ W+ Sbjct: 148 EYYYSKNCPDEIFRKIYL------GYQKKCRALRLLDFDDMLLNTWELLRERTDIRRAWQ 201 Query: 433 ----HILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 +ILVDEFQDI+P + ++ L + + LF VGDD Q+IY F GA+ + F + Sbjct: 202 ERFPYILVDEFQDINPVQYDVIRLLAE--PRKNLFIVGDDDQSIYHFRGARPQIMMNFEK 259 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS 529 ++ ++ L+ YR I A R I+ N + K L++ Sbjct: 260 DYPGTQKVLLNVNYRCTEEILNSAMRMIKHNKNRFPKKLST 300 >UniRef50_B2UPY5 UvrD/REP helicase n=2 Tax=Verrucomicrobia RepID=B2UPY5_AKKM8 Length = 669 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 107/397 (26%), Positives = 175/397 (44%), Gaps = 55/397 (13%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + LN Q AV + LV+AGAGSGKT L R WLL G P ILLL F KAA Sbjct: 24 TALNEEQYAAVSSEPGPALVIAGAGSGKTRTLTYRVAWLLDHG-TDPWNILLLTFTNKAA 82 Query: 255 EEMDERIRE--RLHTEDITARTFHALALHIIQQGSKKV---PIVSKLENDTAARHELFIA 309 EM ER+R L + + TFH++A I++Q ++ + P + +++D Sbjct: 83 REMTERVRSLIPLDLSRLWSGTFHSIANRILRQHAEYLGYTPAFTIMDSD---------- 132 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 ++K+ K SV + D++ + L SL G Sbjct: 133 -------DRKSMIK------------SVVKSLKLDEKSTRFPKPEVLSSLFSLADNEGAN 173 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----K 424 I E S + + + + + N++DF L+ + + + + Sbjct: 174 ----IRETQENAYPYLSNHLDAILEVHDQYVARKQETNSMDFDDLLLNVVRLFQEQEHLR 229 Query: 425 GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 + S ++HILVDE+QD + ++ L+ L +++ Q L VGDD Q+IY + GA M Sbjct: 230 ALYGSRFQHILVDEYQDTNYLQSRLIDMLAREHGQ--LMVVGDDAQSIYSWRGADMENIL 287 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSL--TNGDKKAVTLLD 542 +F + + ++T YR I E++N I N Q++K L S+ T A+ L+ Sbjct: 288 SFTTRYPAAKTFKIETNYRSVPEILELSNAAIAANEVQIEKQLRSVRPTGEMPPALVPLN 347 Query: 543 ESQLDA------LLDKLSGYAKPEE-RILILARYHHM 572 + ++ A + D + P E +L A +H M Sbjct: 348 DDRMQAKFVVQRIRDLIEEGTDPSEIAVLYRAHFHSM 384 >UniRef50_A0LDC5 ATP-dependent DNA helicase, Rep family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDC5_MAGSM Length = 673 Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 96/345 (27%), Positives = 162/345 (46%), Gaps = 53/345 (15%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q +AV + L+VLAGAGSGKT VL R W++ + +ASPE++L + F KAA+E Sbjct: 9 LNAPQRQAVTTLDGPLMVLAGAGSGKTRVLTRRLAWIIQQQQASPEEVLAVTFTNKAAKE 68 Query: 257 MDERIRERLHTEDITAR-------TFHALALHIIQQGSKKVPIVSKLEN-DTAARHELFI 308 M R++ L D A+ TFH ++ +++Q + ++ D++ + LF Sbjct: 69 MRNRVQALLGL-DAPAQAHRFWIGTFHGMSARMLRQYADRLGFERDFTILDSSDQERLF- 126 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 ++ C E F D +RL + RW G Sbjct: 127 ---KRLCEEL----------------------GFADAYWTPKRLTHTIGRWKD-----DG 156 Query: 369 AQAEMIASAPEEIRDLFSK-RIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK--- 424 + + + EIR + + RI+ M + ++ AL NA+DF L+ + + ++ Sbjct: 157 IRPQDLTD--REIRKAWERARIQQM---YERYQQALLQSNAMDFGDLLLHCLQLWQQEPA 211 Query: 425 --GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 F ++++LVDE+QD + + + AL L VGDD Q+IY + GA++ Sbjct: 212 ILAAFQQRFRYLLVDEYQDTNHVQYRWICAL--SGLHQNLCVVGDDDQSIYSWRGARIEN 269 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 F E+F + + L+ YR + I + A+ I N G+++K L Sbjct: 270 ILKFEEDFPQTKIIRLEQNYRSSGNILKAASGLINHNKGRMEKQL 314 >UniRef50_C3JBX6 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria RepID=C3JBX6_9PORP Length = 809 Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 90/341 (26%), Positives = 156/341 (45%), Gaps = 41/341 (12%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNPAQA AV+ + LV+AGAGSGKT VL + LL G P +++ L F KAA E Sbjct: 8 LNPAQAEAVLYDDGPALVIAGAGSGKTRVLTYKLAHLLEEG-YDPHKLMALTFTNKAARE 66 Query: 257 MDERIRERLHTED---ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 M R+ + + D + TFH++ S+ + I + L T ++ Sbjct: 67 MLSRVESMVGSRDTFRMKLGTFHSVF-------SRYLRIYAPLLGFTP-NFSIY------ 112 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 + +K + + ++M + F+ + + R++ + ++ E Sbjct: 113 ----DTSDSKSLVKRIVKDMAL---DPKFYTPKLVLGRISHCKNNLIT---------PEG 156 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRFI 428 A+ E + + + ++ + A+ + NA+DF L++ ++L + Sbjct: 157 YAAGGEYAEYDYRRGVPMLHSVYAAYVAQCRQANAMDFDDLLYYFNILLRDHPEVQAECA 216 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 + ++L+DE+QD +P + L A R ++ +FAVGDD Q+IY F GA M F Sbjct: 217 ASVDYLLIDEYQDTNPSQ--YLIARRLVEAKQRIFAVGDDAQSIYSFRGASMQNILTFTH 274 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS 529 F L+ YR + RI +AN I+ N ++KK + S Sbjct: 275 TFPSARLFKLEENYRSSQRIVALANSLIEHNVHRIKKDVFS 315 Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust. Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 13/66 (19%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + MTIHA+KG + D+V IVGL+EG FP+ + E+ EERRL+YV Sbjct: 573 VHLMTIHAAKGLEFDHVYIVGLEEGL--FPS-----------MLSAEEENIEEERRLLYV 619 Query: 649 ALTRAR 654 A+TRA+ Sbjct: 620 AITRAK 625 >UniRef50_A1WZS5 ATP-dependent DNA helicase UvrD n=3 Tax=Gammaproteobacteria RepID=A1WZS5_HALHL Length = 725 Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 101/341 (29%), Positives = 152/341 (44%), Gaps = 46/341 (13%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 ++ LN AQ AV LVLAGAGSGKT VL RA +L+ ASP IL + F KA Sbjct: 7 TADLNDAQREAVCLPPGRALVLAGAGSGKTRVLTRRAAYLVQVEGASPFAILAVTFTNKA 66 Query: 254 AEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 A EM RI E L T + TFH +A +++Q +++ + + + A+ Sbjct: 67 AGEMRGRIGELLGIATAGMWVGTFHGIAHRLLRQHAQRAGLPEGFQ--------ILDADD 118 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 + + ++ +A+G +DE R R R R G + Sbjct: 119 QLRVVKRVLRARG-------------------NDES---RFPPRQVRGFISARKEEGER- 155 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GR 426 P ++ + + + + ++ A + VDFS L+ +A +L G Sbjct: 156 ------PSDVTEAGGDYQQELLAVYHDYEQACRRGGLVDFSELLLRAYELLRDDPELLGH 209 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + + HILVDEFQD + + L L Q+ LF VGDD Q+IY + GA++ F Sbjct: 210 YQRRFAHILVDEFQDTNALQYRWLKLL--GGEQSELFVVGDDDQSIYGWRGARVENIEHF 267 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 G+ L+ YR I + ANR I+ N G+L K L Sbjct: 268 RREMGDVRVVRLEQNYRSTGTILDAANRLIEHNSGRLGKQL 308 Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 17/117 (14%) Query: 545 QLDALLDKLSGYAK---PEERILILARY-HHMRPASLEKAATRWPKLQIDFMTIHASKGQ 600 LD L+ +A+ PE+ + LA + H + E A W + + MT+H++KG Sbjct: 504 NLDELVTAARTFAQRDEPEDDLDPLAAFLTHAALEAGEGQADDW-EHSVQLMTLHSAKGL 562 Query: 601 QADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRV 657 + V +VG++EG FP R S+ E L EERRL YV +TRAR R+ Sbjct: 563 EFPVVFLVGMEEGL--FP--HRMSVEEPGRL--------EEERRLCYVGMTRARQRL 607 >UniRef50_B3R0N7 ATP-dependent DNA helicase n=1 Tax=Candidatus Phytoplasma mali AT RepID=B3R0N7_PHYMT Length = 708 Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 102/386 (26%), Positives = 173/386 (44%), Gaps = 56/386 (14%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q +AV + + ++ ++AGAG+GKT L R +L+ + E+IL + F KAA E Sbjct: 10 LNSKQYQAVTSKDKAVYLVAGAGTGKTKTLTIRIAYLIKYLNINNEKILAITFTNKAASE 69 Query: 257 MDER-IRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQC 315 M ER + ++ T TFH+L I+++ + L N+ + + I + + Sbjct: 70 MKERLVAMKVDIYKSTICTFHSLGNRILKK------FIHVLNNNFDSNYS--ILDIKDSL 121 Query: 316 SEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIA 375 K +K D EK + + L++++S + + I Sbjct: 122 KIIKKISKDLN----------------IDKEKYKPK---ELNKYIS-NIKNKKEKKIFID 161 Query: 376 SAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRFISP 430 + I +++ ++ L+ N +DF LI +L+K F + Sbjct: 162 NYDNNILKIYNN-----------YQQFLENNNLLDFDDLIIYTYKLLKKHENIKNYFQNK 210 Query: 431 WKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENF 490 + HIL+DEFQD + +L L +N+ +FAVGD Q+IY F GA+++ F ++F Sbjct: 211 FTHILIDEFQDTDFLQYQILKLLNTKNNY--IFAVGDPDQSIYSFRGAEITNNKLFLKDF 268 Query: 491 GEGERCDLDTTYRFNSRIGEVANRFIQQNP--GQLKKPLNSLTNGDKKAVTLL--DESQL 546 + + LD YR + I + AN IQ N G KK + G K + D+ ++ Sbjct: 269 -KAKTLILDENYRSTNNILDKANLLIQNNSFYGFTKKLQSFFGKGHKVFPKMFENDDQEV 327 Query: 547 DALLDKLSGYAKPE----ERILILAR 568 D + +K+ K E E I IL R Sbjct: 328 DFVAEKIKNLIKKEKCNYEDIAILYR 353 >UniRef50_C1E652 ATP-dependent DNA helicase n=2 Tax=Micromonas RepID=C1E652_9CHLO Length = 907 Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 103/366 (28%), Positives = 162/366 (44%), Gaps = 43/366 (11%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 +N Q A+V + VLAG GSGKT VLV R L+ P IL + F KAA E Sbjct: 59 MNDEQIAAIVAPVAPMKVLAGPGSGKTRVLVGRVTHLINELGVPPSHILCITFTNKAARE 118 Query: 257 MDERIRERLHTED---ITARTFHALA-------LHIIQQGSKKVPIVSKLENDTAARHEL 306 M ER+ + E+ ITA TFH++A +H++ + V E DT + Sbjct: 119 MRERLVASVGEENARQITAGTFHSVASRMLRKHVHLLDGYGRGNDFVIYDEADTKSIIRK 178 Query: 307 FIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMH 366 + + + +KK + + +V D ++ R L D SL R Sbjct: 179 IMVDVFME--DKKKADPALAKSRISAAKSAVDACVGMDGRRMARALC---DTRPSLKR-- 231 Query: 367 GGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVIL---E 423 IRD F + L ++ L++ NA+DF L+ A+ +L E Sbjct: 232 -----------DPYIRDQFPR-------LYDEYEANLRSSNALDFDDLLSAAVALLRTSE 273 Query: 424 KGRFI--SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMS 481 + R W+H+LVDEFQD S + L+ AL + ++ +F VGD QAIY + GA+++ Sbjct: 274 EARLFYRQRWRHVLVDEFQDTSLSQYELIRALAAETAR--VFVVGDVDQAIYSWRGAEVA 331 Query: 482 -LTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL 540 + T F +F L YR + I + A I ++ + L+++ G K + Sbjct: 332 NIRTKFDSDFAGAGTVLLTKNYRSTATIVKAAQAVIGESRDRSPLELDAVRPGGKDVAVV 391 Query: 541 LDESQL 546 E ++ Sbjct: 392 ATEDEI 397 >UniRef50_C8W206 ATP-dependent DNA helicase PcrA n=2 Tax=Clostridiales RepID=C8W206_DESAS Length = 737 Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 98/341 (28%), Positives = 152/341 (44%), Gaps = 51/341 (14%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP QA AV + + LL+LAGAGSGKT VL R LL + SP IL + F KAA E Sbjct: 17 LNPVQAEAVRHVDGPLLILAGAGSGKTRVLTHRIAHLLLSEKVSPFNILAITFTNKAALE 76 Query: 257 MDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLE-NDTAARHELFIAEWRK 313 M ER+ L D+ TFH+ L I+++ + + D RH L K Sbjct: 77 MRERVAAILPGVARDLWVATFHSTCLKILRRDGQLLGYGQDFSVYDEGDRHTLI-----K 131 Query: 314 QC-SEKKAQAKGWR-QWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 C E K + Q+++ + S + D++K R Sbjct: 132 DCIKELNIDDKTFSPQYVSSII--SKAKNKLIDEDKYDR--------------------- 168 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----R 426 E ++ +++ A + K ++ LK NAVDF L+ + + ++ R Sbjct: 169 --------EADNILTQK---AAGIYKLYQKKLKTYNAVDFDDLLFLVVRLFKEHPNVLER 217 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + +++ILVDE+QD + + L+ L +++ L VGD Q IY + GA + +F Sbjct: 218 YQHKFRYILVDEYQDTNYVQYLLVKMLAQKSR--NLCVVGDPDQGIYGWRGADIQNILSF 275 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 ++ E L+ YR I + AN I N G+ +K L Sbjct: 276 ERDYPEACVVTLEQNYRSTQNILDAANHIISYNQGRKEKRL 316 >UniRef50_Q0SMP9 Rep helicase, single-stranded DNA-dependent ATPase n=19 Tax=Borrelia burgdorferi group RepID=Q0SMP9_BORAP Length = 659 Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 98/349 (28%), Positives = 157/349 (44%), Gaps = 62/349 (17%) Query: 187 DFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILL 246 DFF++ LN Q AV E +LL++AGAGSGKT V+ R +LL +G A E IL Sbjct: 4 DFFKK----SLNQFQYEAVTTIEGALLIIAGAGSGKTRVVTHRIAYLLLKGIAQKE-ILA 58 Query: 247 LAFGRKAAEEMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARH 304 L F KAA EM +RI++ L + ++ TFHA L +++ K Sbjct: 59 LTFTNKAANEMKDRIKKILKSPLSNLMVSTFHAFGLFFLKENYK---------------- 102 Query: 305 ELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLA-SRLDRWVSLM 363 + +RK S R L +E+ D+ L ++++ + L +SL Sbjct: 103 ---LLGYRKNFS---IYDDNDRISLLKEI--------LLDEGLLNKKVSLNSLSNVISLF 148 Query: 364 RMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE 423 + +G + I L+ +R++L N+ DF LI + +L Sbjct: 149 K-NGILTLNDLKEEDINIFRLYEERLRLY--------------NSFDFDDLILKPKELLS 193 Query: 424 -----KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGA 478 + ++ +K++L+DEFQD S + + L + + L VGDD Q+IY + GA Sbjct: 194 NNSDIRNKYSKRYKYVLIDEFQDTSLIQYNFIRLLI---NHSNLCCVGDDDQSIYSWRGA 250 Query: 479 QMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 + F +++ E L+ YR I +VAN I N + +K L Sbjct: 251 SYNNMLQFEKDYNAKE-IKLEQNYRSAKNILDVANSVILNNKNRKEKTL 298 >UniRef50_B7AA42 UvrD/REP helicase n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AA42_THEAQ Length = 701 Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 106/388 (27%), Positives = 172/388 (44%), Gaps = 56/388 (14%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 S LN AQ +AV++ E LV+AGAGSGKT +V R +L+AR P +IL + F KAA Sbjct: 13 SSLNEAQRQAVLHFEGPALVVAGAGSGKTRTVVHRVAYLIARRGVFPSEILAVTFTNKAA 72 Query: 255 EEMDERIRERLH-TEDITARTFHALALHIIQQGSKKVP-----IVSKLENDTAARHELFI 308 EEM R++ + ++ TFHA AL I++ ++V +V ++ TA E+ Sbjct: 73 EEMKARLKAMVRGAGELWVSTFHAAALRILRVYGERVGLKPGFVVYDEDDQTALLKEVL- 131 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 +E+ + G + S LDR + G Sbjct: 132 ----------------------KELGLAAKPGP----------IKSLLDR----AKNQGV 155 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG--- 425 ++ PE L R++ +L ++ AL+A+ A+DF ++ A+ +LE+ Sbjct: 156 PPEHLLLELPEFYAGLSRGRLQ---DVLHRYQEALRAQGALDFGDILLYALKLLEEDGEV 212 Query: 426 --RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 R + I VDE+QD +P + L + L AVGD Q IY F A + Sbjct: 213 LKRVRKRARFIHVDEYQDTNPVQYRFTRLL--AGEEANLMAVGDPDQGIYSFRAADIRNI 270 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDE 543 F +++ + L+ YR I AN I +N +L+K L + G + E Sbjct: 271 LDFTQDYPKARVYRLEDNYRSTEAILRFANAVIVKNALRLEKTLRPVKKGGEPVRLFRAE 330 Query: 544 SQLDA---LLDKLSGYAKPEERILILAR 568 S D + ++++ P +R+ +L R Sbjct: 331 SARDEARFVAEEIARLGPPFDRVAVLYR 358 >UniRef50_C7HU69 ATP-dependent DNA helicase PcrA n=2 Tax=Anaerococcus RepID=C7HU69_9FIRM Length = 729 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 88/341 (25%), Positives = 153/341 (44%), Gaps = 47/341 (13%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 S LN Q AV++ + LLV+AGAGSGKT VL +L+ +P IL + F KAA Sbjct: 4 SNLNDKQKEAVLHDKGPLLVVAGAGSGKTRVLTTSIAYLIKEKNVNPVNILAITFTNKAA 63 Query: 255 EEMDERIRERLHTEDIT---ARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 EM ERI + L ED++ TFH++ I++ K+ + I + Sbjct: 64 NEMKERISDLLD-EDVSHLWIGTFHSICARILRMNINKI----------GYDNNFTIYDT 112 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 Q + L +E+ + + N+ DD + L +S + + Sbjct: 113 NDQ------------KTLVKEI---INDLNYKDDISPKEAL-----NLISYCKNKSISPK 152 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR----- 426 E + I ++K+ + + K ++ N++DF LI + + + + Sbjct: 153 EFL-----NINTFYAKQEEYYN-IYKNYEKKKFEYNSLDFDDLILKTLELFAEDSNTLKY 206 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + ++++ VDE+QD + + L+ + K + VGD Q+IY F GA ++ F Sbjct: 207 YQDKFEYLFVDEYQDTNKSQYELIKFIGK--GHNNVRVVGDADQSIYSFRGADINNILDF 264 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 ++F + + L+ YR S I VAN+ I+ N + +K L Sbjct: 265 EKDFKDAKTIKLEENYRSTSNIINVANKLIKNNSERKEKNL 305 >UniRef50_D0LJZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJZ3_HALO1 Length = 787 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 98/351 (27%), Positives = 166/351 (47%), Gaps = 59/351 (16%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 ++ LNPAQ +AV +G+ L+VLAGAG+GKT VLV R ++ RG P IL + F KA Sbjct: 4 TAQLNPAQRKAVEHGDGPLMVLAGAGTGKTRVLVNRIAHMVDRG-VPPRDILAVTFTNKA 62 Query: 254 AEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 A+EM ER+RE L + TFHA + +++ + + + +F ++ Sbjct: 63 AKEMRERLRELLGMAANAMWIGTFHATCVKLLRIHGEHIGLSRDF--------TIFDSDD 114 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSL----MRMHG 367 +K+ + G +D+ + LA ++DR S M HG Sbjct: 115 QKRLLNALIKEHG------------------LEDQVSAKTLAVQIDRCKSRDEDPMDRHG 156 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRF 427 G ++ +R+++ PL ++ + + AVDF+ L+ + ++ L + Sbjct: 157 GWGDDL-------LREIY--------PL---YQAGMAQQGAVDFNDLLLK-VLELARDPT 197 Query: 428 ISP-----WKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + P + H+LVDEFQD + + L+ + L VGDD Q+IY + GA+ Sbjct: 198 VGPVLSARFDHVLVDEFQDTNRVQFRLVRHF--ADVSRNLTVVGDDDQSIYSWRGAEPRN 255 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNG 533 F ++ + E L+ YR S I + AN I +N + +K L + ++G Sbjct: 256 LLEFKRDYPDAEVVKLEQNYRSTSVILDAANAVIAKNRNRHEKALWTASDG 306 Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 27/111 (24%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDA----EER 643 ++ MTIHA+KG + V + GL+EG FP+ L +D D EE Sbjct: 548 KVKMMTIHAAKGLEFPVVFLCGLEEGL--FPS-----------LRERDDQNDGDTLEEEY 594 Query: 644 RLMYVALTRARHR----------VWALFNKENPSPFVEILKNLDVPVARKP 684 RL YVA+TRAR R +W + PS F++ + + + V +P Sbjct: 595 RLAYVAITRARERLVLTYAMQRMIWGETRSQRPSRFLDSIPDDCLAVRAEP 645 >UniRef50_C0R2D4 ATP-dependent DNA helicase n=4 Tax=Brachyspira RepID=C0R2D4_BRAHW Length = 659 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 92/341 (26%), Positives = 154/341 (45%), Gaps = 53/341 (15%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 ++ Q +++ LL+LAGAGSGKT V+ + +L+ E +PE I+ + F KAA E Sbjct: 7 VSEVQREGILHTGSPLLLLAGAGSGKTLVITRKIAYLINELEVAPENIMAVTFTNKAAHE 66 Query: 257 MDERIRERL---HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 M ER+ L + RTFH+ L I+++ + + S L + E K Sbjct: 67 MKERVCSLLPDIKPSRLFIRTFHSACLRILKENAHFLGYKSNF---------LILDEGDK 117 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 A ++ + EE VP+ + +++ +R + + G + Sbjct: 118 --------ASVIKRIMKEE---EVPKS-------IGQKIITRF-----ISNVKNGMDDGI 154 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRFI 428 + RD+F + K + EN +DF LI I + E+ + Sbjct: 155 VFD-----RDIFEN-------VYKKYTEYEFNENVMDFDDLILNTIKLFEQENKVLNYYR 202 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 + +K+ILVDEFQD +PQ+ L+ L Q+++ L VGDD Q+IY F GA + F + Sbjct: 203 NRFKYILVDEFQDTNPQQYKLIKLL-TQDAENDLTVVGDDDQSIYAFRGADVLNILDFEK 261 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS 529 ++ + L+ YR I E A I+ N + +K + S Sbjct: 262 DYPNTKIVRLEENYRCPKDIVEAALSVIKNNSNRHEKNVFS 302 Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 12/76 (15%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + MTIH +KG + D V + G+++G FP S+ EE + EERRL YV Sbjct: 549 VTLMTIHNAKGLEFDVVFMTGMEQGV--FPHYF--SLEEEKGID--------EERRLCYV 596 Query: 649 ALTRARHRVWALFNKE 664 +TRAR +++ ++K+ Sbjct: 597 GITRARRKLYLTYSKK 612 >UniRef50_B1GYW6 ATP-dependent UvrD family DNA helicase PcrA n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYW6_UNCTG Length = 772 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 90/359 (25%), Positives = 167/359 (46%), Gaps = 44/359 (12%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 +++ + LNP+QA AV+ E L++ AGAG+GKT V+ R +LL+ G S + +L + F Sbjct: 2 KEMLTKNLNPSQAEAVLCTEGPLIIFAGAGTGKTRVITHRIAYLLSLGVVS-QSVLAVTF 60 Query: 250 GRKAAEEMDERIRERLHTEDIT--ARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 KAA EM +RI + + + TFH+ H ++ + ++ + Sbjct: 61 TNKAASEMKKRISDLIPGVGVNVWVSTFHSFCAHFLRAEASRISL----------NPYFL 110 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 I ++ Q S K K + ++ E F KL +A ++ R ++ Sbjct: 111 IYDFIDQKSVVKDCVK----------ELNIDEKKF----KLS-IIADKISRAKDNLKFPS 155 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR- 426 AE E D F + A + + ++ L+ +A+DF LI + + L++ Sbjct: 156 DMAAE-----AESAGDFFGITV---AKIYELYQKKLERADAMDFGDLIMRTVSALQRHSE 207 Query: 427 ----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + +K+I+VDE+QD + + + L + + VGDD Q++Y + GA ++ Sbjct: 208 LLEYYREKYKYIMVDEYQDTNHAQYIFIKLLAGKYHNVCV--VGDDDQSVYSWRGADINN 265 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL 541 F +++ + L+ YR +I AN+ ++ N ++ K L + N D +VT+L Sbjct: 266 ILDFEKDYPNAKSVKLEQNYRSTPKILSTANQVVKYNNARISKRLWT-QNPDNGSVTVL 323 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 12/79 (15%) Query: 586 KLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRL 645 K ++ MT+H +KG + D V I GL+EG FP ES + L EERRL Sbjct: 551 KGKVTLMTLHLAKGLEFDNVFICGLEEGL--FPMG--ESAFNDKELE--------EERRL 598 Query: 646 MYVALTRARHRVWALFNKE 664 MYV +TRAR ++ ++ E Sbjct: 599 MYVGMTRARKCLYLCWSTE 617 >UniRef50_C5C915 ATP-dependent DNA helicase PcrA n=7 Tax=Actinomycetales RepID=C5C915_MICLC Length = 858 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 91/357 (25%), Positives = 147/357 (41%), Gaps = 71/357 (19%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q+ AV + LL++AGAGSGKT VL R WLLA G A P +IL + F KAA E Sbjct: 70 LNPQQSAAVTHTGAPLLIVAGAGSGKTRVLTHRIAWLLATGRARPHEILAITFTNKAAAE 129 Query: 257 MDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVS-----------KLENDTAAR 303 M ER+ + + + TFH+ A+ +++ + + + S +L A + Sbjct: 130 MRERVAGLIGPTAQRMWISTFHSSAVRLLRNEAANIGLKSTFTIYDSADSLRLVTTVAKQ 189 Query: 304 HELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLM 363 HEL + + + + ++ +V EG+ W Sbjct: 190 HELDPKRFAPKALLNRISSLKNELVEADDYAATVAEGDPWG------------------- 230 Query: 364 RMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE 423 + +A + + + L+ NA+DF LI + + E Sbjct: 231 --------------------------RAVAAVYRDYTARLRQANALDFDDLIGMTVHMFE 264 Query: 424 K-----GRFISPWKHILVDEFQDISPQRAALLAALRK--------QNSQTTLFAVGDDWQ 470 + ++H+LVDE+QD + + L+ L + L VGD Q Sbjct: 265 AFPRVLDNYRRRFRHVLVDEYQDTNHAQYRLIRLLAGPAGDPEGVETPGGELTVVGDSDQ 324 Query: 471 AIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 +IY F GA + F ++F + L+ YR I + AN I++NP + K L Sbjct: 325 SIYAFRGADIRNIVEFEQDFTDAVTIKLEQNYRSTQTILDAANAVIERNPDRRPKRL 381 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 12/71 (16%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 Q+ MT+H +KG + V + G++ G FP A S+ +E L AEERRL Y Sbjct: 635 QVTLMTLHTAKGLEFPVVFLTGMEHGV--FPHA--RSMTDEKEL--------AEERRLAY 682 Query: 648 VALTRARHRVW 658 V LTRAR R++ Sbjct: 683 VGLTRARRRLF 693 >UniRef50_B0KVA6 Putative UvrD/REP helicase n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVA6_9BACT Length = 710 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 96/356 (26%), Positives = 161/356 (45%), Gaps = 55/356 (15%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + LN Q +AV + +LV+AGAG+GKT V+ R +L+ P++IL L F KAA Sbjct: 9 TELNEEQLKAVKHKSGPVLVVAGAGTGKTRVITERIRYLIKEKNVDPQEILALTFTEKAA 68 Query: 255 EEMDERIRE--RLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 +EM +R+ + L E+ TFH+ A I+++ ++ I D + + Sbjct: 69 QEMVDRVGDIMPLGYEEPWVYTFHSFADRILKEKGIEIGI------DPSYK--------- 113 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDE-KLQRRLASRLDRWVSLMRMHGGAQA 371 L+ QW + N +D + K R L + +++ Q Sbjct: 114 ---------------ILSPSDQWLLLRKNLFDLKLKYFRPLGNPTKFISAILTFISRLQD 158 Query: 372 EMIASAPEEIRDLFS----------KRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVI 421 E ++ PEE+ + +R + ++ + ++ +A+DF LI I + Sbjct: 159 ENVS--PEELLEFVKHSNYTSDEEKQRWEELSYIYSEYERLKIESSAMDFGNLIIWVIKL 216 Query: 422 LEK-----GRFISPWKHILVDEFQDISPQRAALLAAL----RKQNSQTTLFAVGDDWQAI 472 L + + +KHILVDEFQD + + L+ L + S+ +L VGDD Q+I Sbjct: 217 LNVRPNILAEYKNQFKHILVDEFQDTNYAQYELIKLLFPTKETKESERSLLVVGDDSQSI 276 Query: 473 YRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQ-QNPGQLKKPL 527 Y+F GA +S F E++ + + L YR I + A + IQ NP L+ L Sbjct: 277 YKFRGAAVSNILQFMEDYKDSKMITLLKNYRSTQEILDAAYKLIQNNNPDTLESKL 332 >UniRef50_Q6GFF2 ATP-dependent DNA helicase pcrA n=81 Tax=cellular organisms RepID=PCRA_STAAR Length = 730 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 98/362 (27%), Positives = 165/362 (45%), Gaps = 50/362 (13%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 +N Q+ AV E LL++AGAGSGKT VL R +LL + SP +L + F KAA E Sbjct: 8 MNTEQSEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNVLAITFTNKAARE 67 Query: 257 MDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M ER+++ + E I TFH++ + I+++ + ++ I I + Q Sbjct: 68 MKERVQKLVGDQAEVIWMSTFHSMCVRILRRDADRIGI----------ERNFTIIDPTDQ 117 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 S K V + D +K + R+ +S ++ + + Sbjct: 118 KSVIK----------------DVLKNENIDSKKFEPRM---FIGAISNLK----NELKTP 154 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRFIS 429 A A +E D S +++A + ++ L A+DF LI I + E+ + + Sbjct: 155 ADAQKEATDYHS---QMVATVYSGYQRQLSRNEALDFDDLIMTTINLFERVPEVLEYYQN 211 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 +++I VDE+QD + + L+ L + L VGD Q+IY + GA + +F ++ Sbjct: 212 KFQYIHVDEYQDTNKAQYTLVKLLASKFK--NLCVVGDSDQSIYGWRGADIQNILSFEKD 269 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL-NSLTNGDK----KAVTLLDES 544 + E L+ YR I AN I+ N + K L + TNG+K +A+T DE+ Sbjct: 270 YPEANTIFLEQNYRSTKTILNAANEVIKNNSERKPKGLWTANTNGEKIHYYEAMTERDEA 329 Query: 545 QL 546 + Sbjct: 330 EF 331 >UniRef50_C1A3F5 ATP-dependent DNA helicase UvrD1 n=31 Tax=Bacteria RepID=C1A3F5_RHOE4 Length = 830 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 96/350 (27%), Positives = 159/350 (45%), Gaps = 56/350 (16%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q AVV+ LL++AGAGSGKT+VL R +LLA +P QIL + F KAA E Sbjct: 35 LNPQQREAVVHAGSPLLIVAGAGSGKTAVLTRRIAYLLAERGVTPGQILAITFTNKAAAE 94 Query: 257 MDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIV----SKLENDTAARHELFIAE 310 M ER+ + + TFH+ + I++ + +P + S ++D + R I++ Sbjct: 95 MRERVAALVGPRANAMWVSTFHSSCVRILRAQAALLPGLNSNFSIYDSDDSRRLLTMISK 154 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASR-LDRWVSLMRMHGGA 369 D E +R ++R L +S ++ Sbjct: 155 ---------------------------------DLELDTKRFSARLLATHISNLKNELVG 181 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFIS 429 E + +A ++ +L +L+A + ++ L+A NA+DF LI + + +L+ I+ Sbjct: 182 PEEAVVAADQDPAEL----PRLIAKVYGHYQQRLRAANALDFDDLIGETVALLQAFPQIA 237 Query: 430 PW-----KHILVDEFQDISPQRAALLAALRKQNSQTT-------LFAVGDDWQAIYRFSG 477 + +H+LVDE+QD + + L+ L ++ L VGD Q+IY F G Sbjct: 238 EYYRRRFRHVLVDEYQDTNHAQYMLVRELVGGAGESDHAVAPAELCVVGDADQSIYAFRG 297 Query: 478 AQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 A + F ++ + L+ YR I AN I +N G+ +K L Sbjct: 298 ATIRNIEEFERDYPDARTILLEQNYRSTQNILSAANSVISKNTGRREKRL 347 >UniRef50_A5GA79 UvrD/REP helicase n=10 Tax=Desulfuromonadales RepID=A5GA79_GEOUR Length = 678 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 94/342 (27%), Positives = 149/342 (43%), Gaps = 48/342 (14%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 S LNP Q AV + E +LLVLAGAGSGKT V+ R LL + IL + F KAA Sbjct: 5 STLNPQQLAAVKHTEGALLVLAGAGSGKTGVITYRIAHLLLNKKVPAMNILAVTFTNKAA 64 Query: 255 EEMDERIRE---RLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 +EM ER+ R + I TFH+L + I++ R+ + Sbjct: 65 KEMRERVDSLVGRQACKGIIISTFHSLGVRILR------------------RNIELLGYK 106 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 R + G + + E+ +G +D + + ++++ ++ + Sbjct: 107 RNFSIYSTSDQIGLVKQIMREVNI---DGKKYDADSIIWKISAAKNKLI----------- 152 Query: 372 EMIASAPEEIRDLFSKRIKLMAP-LLKAWKGALKAENAVDFSGLIHQAIVILEKG-RFIS 429 P+ F +LMA + ++ ALKA NA+DF +I +L+ + Sbjct: 153 -----PPDRFTPRFGDEYELMAAEVYPRYQSALKAFNAIDFDDIIMLTADLLQNHPEVLQ 207 Query: 430 PW----KHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 W ++++VDE+QD + + L+ L L VGDD Q+IY + GA + Sbjct: 208 HWQERFRYVMVDEYQDTNASQYLLVNLL--AGGYGNLCVVGDDDQSIYGWRGADVGNILD 265 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 F ++F E L+ YR I E AN I N + +K L Sbjct: 266 FEKDFKECRVVKLEQNYRSTGNILEAANHVIGHNAKRKEKRL 307 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 20/70 (28%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPP----VEDFPDAEERR 644 + M++H+SKG + YV +VG MEE +LP EDF EERR Sbjct: 559 VTLMSLHSSKGLEFPYVFLVG----------------MEEEILPHKRSIYEDFTVDEERR 602 Query: 645 LMYVALTRAR 654 L YV +TRAR Sbjct: 603 LCYVGITRAR 612 >UniRef50_B0RZ36 ATP-dependent DNA helicase n=21 Tax=Bacteria RepID=B0RZ36_XANCB Length = 658 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 106/344 (30%), Positives = 155/344 (45%), Gaps = 60/344 (17%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q+ AV++ E LLVLAGAGSGKT V+V + L+A G ++I + F K+A+E Sbjct: 4 LNPPQSAAVLHCEGPLLVLAGAGSGKTRVIVEKIAHLIAIGRYPAKRIAAITFTNKSAKE 63 Query: 257 MDERIRERLH---TEDITARTFHALALHIIQ-----QGSKKVPIVSKLENDTAARHELFI 308 M ER+ +R+ + +T TFHAL L +Q G K+ S ++D AA Sbjct: 64 MRERVAKRIRGDGADGLTICTFHALGLKFLQIEHAAAGLKRG--FSIFDSDDAA------ 115 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 AQ K + M + P+ +D K +S + G Sbjct: 116 -----------AQIK-------DLMHGAKPDA--IEDAK----------NLISRAKNAGM 145 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-RF 427 + + +A+A S R K A L + ++ L NAVDF LI + ILE Sbjct: 146 SPEQAMAAAR-------SNREKEAASLYERYQARLTTFNAVDFDDLIRLPVQILEANEEI 198 Query: 428 ISPWK----HILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 + W+ ++LVDE QD + + LL L T VGDD Q+IY + GA Sbjct: 199 VMGWRERIGYLLVDECQDTNDAQYRLLKMLAGPRGNFT--CVGDDDQSIYAWRGANPENL 256 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 ++ E L+ YR ++R+ AN I NP + K L Sbjct: 257 QQMGRDYPALEIIKLEQNYRCSNRVLRAANALIAHNPHEHLKTL 300 Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 13/76 (17%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 Q+ MT+HASKG + YV IVG ++G E +EE L EERRL+Y Sbjct: 541 QVRMMTMHASKGLEFRYVFIVGCEDG-----VLPHEVSLEEGNL--------QEERRLLY 587 Query: 648 VALTRARHRVWALFNK 663 V +TRA+ ++W ++K Sbjct: 588 VGITRAKQQLWMSYSK 603 >UniRef50_Q2S575 ATP-dependent DNA helicase n=2 Tax=Rhodothermaceae RepID=Q2S575_SALRD Length = 712 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 98/348 (28%), Positives = 156/348 (44%), Gaps = 48/348 (13%) Query: 178 TEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARG 237 TE + EYA+ LN Q A G+ LL++AGAG+GKT L+ R +L+ G Sbjct: 18 TEDLTIEYAE--------ALNEQQYAAATAGKGPLLIVAGAGTGKTRTLIYRLAYLVETG 69 Query: 238 EASPEQILLLAFGRKAAEEMDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSK 295 P+QI+LL F R+AA +M R L E + TFHA L +++Q ++ + Sbjct: 70 -TRPQQIVLLTFTRRAANDMTARASNLLDGRCEKVRGGTFHAFCLEVLRQHAEALGFPRN 128 Query: 296 LENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASR 355 AA ++ R + G ++ + +S+ DE L + R Sbjct: 129 FTVLDAADAADVLSVIRT----RGEYGDGEERFPQKNTLYSMFSSATNRDETLGETITKR 184 Query: 356 LDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLI 415 ++ SL AE+ A +RD A++ K +DF L+ Sbjct: 185 YPQFTSL-------HAELKA-----LRD--------------AYRRYKKEHGLMDFDDLL 218 Query: 416 HQAIVILE-----KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQ 470 + + +LE + + S +H+LVDE+QD + +A L+ + T+ VGDD Q Sbjct: 219 ERTLELLETDDDVRHQVASRCRHVLVDEYQDTNALQAELVKKFSSVHGNVTV--VGDDAQ 276 Query: 471 AIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQ 518 +IY+F GA F + F + E L+ YR I ++ANR I+Q Sbjct: 277 SIYKFRGADFRNIFRFPDEFDDTEVVKLEHNYRSTQPILDLANRVIEQ 324 >UniRef50_A2F783 UvrD/REP helicase family protein n=1 Tax=Trichomonas vaginalis RepID=A2F783_TRIVA Length = 727 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 94/326 (28%), Positives = 141/326 (43%), Gaps = 56/326 (17%) Query: 197 LNPAQARAVVNG-EHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN Q AV E L + AGAGSGKT L+ R +++ +G +PE IL + F RKAA+ Sbjct: 9 LNEEQRAAVTASIEDPLFIYAGAGSGKTRTLICRIAYMIDQG-VNPENILAMTFTRKAAD 67 Query: 256 EMDERIRERLHT------EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIA 309 E IRERL T +T TFH L L+I++Q P + + H IA Sbjct: 68 E----IRERLKTFIGPKASSVTTSTFHQLCLNILKQN----PFILGFSGNDQTFH---IA 116 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 + +Q K RQ +S P R +++ +V+ +M G Sbjct: 117 DNTEQRKIIKNAVNALRQKDPSRKDFSTPTS--------LRIYTNKMHNFVNRAKMLG-- 166 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG---- 425 ++ +DLF +LK ++ L +DF+ + +L K Sbjct: 167 ---------KKSQDLFGD----FQFILKFYEDTLHKRRLIDFTDFMTYTQELLLKHQRVA 213 Query: 426 -RFISPWKHILVDEFQDISPQRAALLAALRKQ-------NSQTTLFAVGDDWQAIYRFSG 477 ++ +++IL+DEFQD S A+L + +Q N + T+ VGD Q+IY F G Sbjct: 214 YKYRKLYQYILIDEFQDTSDINFAILKLILQQSMTRQPPNRRVTI--VGDPHQSIYSFRG 271 Query: 478 AQMSLTTAFHENFGEGERCDLDTTYR 503 A F E F + L YR Sbjct: 272 ANPDNIKQFLEMFPDAGHVTLSKNYR 297 >UniRef50_C5NYN7 ATP-dependent helicase PcrA n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYN7_9BACL Length = 727 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 93/341 (27%), Positives = 160/341 (46%), Gaps = 51/341 (14%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 +N Q +A++ E +++V+AGAGSGKT VL R +L++ IL + F KAA+E Sbjct: 7 MNDNQLKAILKTEGAVMVIAGAGSGKTRVLTNRIAYLISEKNILENNILAITFTNKAAKE 66 Query: 257 MDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M ERI + ++ I TFH++ + I++Q + ++ +N T Sbjct: 67 MKERIYALVGETSKYIWINTFHSMCVRILRQ---HIELLGYNKNFTIL-----------D 112 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 SE+K+ K + L P + + +++ + VS+ +M Sbjct: 113 TSEQKSIIKNIVRSLDLSEDAYQPAN-------VLKIISNAKNSLVSVKKMR-------- 157 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRFIS 429 E+ R F K + A + ++ LK + +DF L+ + IV+ +K + + Sbjct: 158 ----EQSRFGFMKNV---AEIYAHYQSYLKKNSVLDFDDLMLKTIVLFKKFPEVLAIYQN 210 Query: 430 PWKHILVDEFQD---ISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 +++I VDE+QD I + +L+A+ K + VGDD Q+IY + GA F Sbjct: 211 QFQYIHVDEYQDTNVIQYRLIKMLSAVHKN-----VCVVGDDDQSIYSWRGACSDNIINF 265 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 ++F + E LD YR NS I + AN I+ N + +K L Sbjct: 266 EKDFDDVELVFLDQNYRSNSTILDAANAVIKNNTDRKEKEL 306 >UniRef50_B8FP41 ATP-dependent DNA helicase PcrA n=10 Tax=Firmicutes RepID=B8FP41_DESHD Length = 755 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 99/342 (28%), Positives = 160/342 (46%), Gaps = 53/342 (15%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q +AV + E LL+LAGAGSGKT VL R L+A+G P IL + F KAA+E Sbjct: 7 LNPVQRQAVEHREGPLLILAGAGSGKTRVLTYRIAHLIAQG-VEPWHILAITFTNKAAQE 65 Query: 257 MDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M +R+ + +E + TFH+ + I++ +P S+ I + Q Sbjct: 66 MRDRVYSLVGSEGRGLWVATFHSACVRILRSEIGYLPGYSR---------SFVIYDSGDQ 116 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 + K+ K E N DEK + A R ++ + A+ +++ Sbjct: 117 LALIKSCMK---------------ELNL--DEK---KFAPR-----AIEAVISDAKNKLL 151 Query: 375 ASAPEEI----RDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG----- 425 PE+ +D F ++ + + L + L A NA+DF +I + + + Sbjct: 152 --TPEDFSRRAKDYFEQKAERVYEL---YLKKLLANNALDFDDIIMLTVRLFRENPEVLS 206 Query: 426 RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 ++ +++ILVDE+QD + + AL+ L K+ L VGDD Q+IY F GA + Sbjct: 207 QYQDKFRYILVDEYQDTNHAQYALVNLLAKK--YRNLCVVGDDDQSIYMFRGADVQNILD 264 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 F ++ E + L+ YR I + AN +Q N + +K L Sbjct: 265 FERDYPEAKTLKLEQNYRSTKSILQAANSVVQNNTERKEKSL 306 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/132 (31%), Positives = 71/132 (53%), Gaps = 25/132 (18%) Query: 533 GDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFM 592 D ++ E DAL+ L+G+ E++ ++A+ SL++A + M Sbjct: 523 ADNYETAVVQEGIEDALVPGLTGFL---EQVSLVAQID-----SLDQADD-----AVVMM 569 Query: 593 TIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTR 652 TIH++KG + V + G++EG FP++ S+++ LL AEERRL YVA+TR Sbjct: 570 TIHSAKGLEFPVVFLGGMEEGI--FPSS--RSMLDPVLL--------AEERRLCYVAITR 617 Query: 653 ARHRVWALFNKE 664 AR R++ + ++ Sbjct: 618 ARERLYLAYAQQ 629 >UniRef50_A5WC18 UvrD/REP helicase n=2 Tax=Psychrobacter RepID=A5WC18_PSYWF Length = 742 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 109/411 (26%), Positives = 177/411 (43%), Gaps = 61/411 (14%) Query: 122 REQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEAM 181 R++ + +QQ I + S L P + + N + + D SA HN + + Sbjct: 21 RQKMAHLQQSIAKLESNLIAPESMDKRLSNTVYDDKVADQKIADKHSA--PHNSVLSSSE 78 Query: 182 LTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASP 241 + +YA LNP+Q A E +LV+AGAGSGKT L R +L+ G ASP Sbjct: 79 V-DYA--------GELNPSQLLAATTTEGKVLVIAGAGSGKTKTLTYRTSYLIESG-ASP 128 Query: 242 EQILLLAFGRKAAEEM-------------DERIRERLHTEDITARTFHALALHIIQQGSK 288 ILLL F RKAA E+ D R L IT+ TFH+ ++++ S Sbjct: 129 SSILLLTFTRKAANEIKGRVKSLLAESLADNRALSGLDLNAITSGTFHSFCNMLLRRYSG 188 Query: 289 KVPIVSKLEN-DTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEK 347 + I K DT + C E+ K +Q F + Sbjct: 189 LLGINPKFTILDTGDSEDAL----DMICKEQGIVRKNMKQA-------------FPRKKT 231 Query: 348 LQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAEN 407 LQ +++ +R + L+R ++I + +I + I L+ L A+ +A + Sbjct: 232 LQNLISTSRNRHI-LLR-------DLIENDYPDI----AIHIPLIEDLAMAYHKYKRANH 279 Query: 408 AVDFSGLIHQAIVILEKG----RFI-SPWKHILVDEFQDISPQRAALLAALRKQNSQTTL 462 DF +I Q + L+ + I ++H++VDE+QD + + L+ L + ++ +L Sbjct: 280 LYDFDDIISQVVYHLKNNLQFRKLIQDTYRHVMVDEYQDTNIPQKQLIDYLCEPDN-VSL 338 Query: 463 FAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVAN 513 VGDD Q+IY F GA F + + + + L+ YR I + N Sbjct: 339 MVVGDDNQSIYAFRGANYENILLFADGYPDAKLIKLEQNYRSTPAILDYVN 389 >UniRef50_A6TQ92 UvrD/REP helicase n=2 Tax=Alkaliphilus RepID=A6TQ92_ALKMQ Length = 678 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 90/349 (25%), Positives = 160/349 (45%), Gaps = 60/349 (17%) Query: 193 ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 E++ LN Q A+ + +V AG GSGKT V+ R +L+ G +P +IL++ F + Sbjct: 5 ENALLNDQQIEAIKHLNGPCMVYAGPGSGKTRVITERVSYLINVGHVNPREILVITFTKA 64 Query: 253 AAEEMDERIRERLHTED-----ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 AAEEM R + ED +T TFH++ +++ LEN Sbjct: 65 AAEEMKNRFAKDESVEDSKKRQVTFGTFHSIFFRMLKSYCG-----YNLEN--------- 110 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 +G + + + + ++ GN D+E+L + L + +W + + G Sbjct: 111 ------------ILNEGEKFNVIKNIVRTLDVGN-HDEEELIKDLILDIGKWKNNLFNRG 157 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIV------- 420 E I P+ + KR+ L +++ +DF ++ + Sbjct: 158 ----EFI---PKTLESSEFKRV------LDSYENFKVDHGKIDFDDMLTKCYDLLRARPG 204 Query: 421 ILEKGRFISPWKHILVDEFQDISPQRAALLAALRK--QNSQTTLFAVGDDWQAIYRFSGA 478 +LE R + +++IL+DEFQDI+ + + + + QN LF VGDD Q+IY F GA Sbjct: 205 VLEHVR--NQYQYILIDEFQDINGVQFETIKLMAEPLQN----LFVVGDDDQSIYSFRGA 258 Query: 479 QMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 + FH+ + + ++ L+ YR I + AN+ I+QN +++K + Sbjct: 259 NPQIILNFHDIYPKAQKITLNMNYRSQENIIKSANQLIKQNKCRVEKQI 307 Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 15/99 (15%) Query: 572 MRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALL 631 M+ + +K+ R + Q++ +T+H++KG + VII+G EG I + Sbjct: 524 MKSSLSQKSFHRTEEEQVELLTMHSAKGLEYKVVIILGAIEG----------VIPHHKSM 573 Query: 632 PPVEDFPDAEERRLMYVALTRARHRVW---ALFNKENPS 667 +ED EERRL YVA+TRA+ R++ +L E P+ Sbjct: 574 DTLEDI--EEERRLFYVAMTRAKERLYISSSLIRYEKPT 610 >UniRef50_B2UQR8 UvrD/REP helicase n=2 Tax=Verrucomicrobiaceae RepID=B2UQR8_AKKM8 Length = 668 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 101/361 (27%), Positives = 164/361 (45%), Gaps = 71/361 (19%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN AQ +AV + +L+LAGAG+GKT + R ++ RG SP+ IL + F KAA E Sbjct: 10 LNAAQRKAVQTLQGPVLILAGAGTGKTRTVTCRIAHMVDRG-ISPKSILAVTFTNKAALE 68 Query: 257 MDERIR---ERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 M ER+ ER I TFH+L + I+++ ++ Sbjct: 69 MRERVGQMVERKAARQIMVSTFHSLCVRILREDIGRL----------------------- 105 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 G++ +++ G+ + L RRL R HGG ++ Sbjct: 106 ----------GYK------TNFTIYSGS--EQSGLIRRLIVR----------HGGITEKI 137 Query: 374 ----IASAPEEIRD----LFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG 425 + S+ +++ L S L A + +++ L+A+N+VDF L+ A +L++ Sbjct: 138 TPKDVLSSMSRMKNSGLGLDSIEDNLTANIAASYQRELQAQNSVDFDDLLILADKLLKEH 197 Query: 426 RFISP-----WKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQM 480 R + +++I VDEFQD + + +LL L + + VGDD Q+IY + GAQ+ Sbjct: 198 RDVREAWQQRFRYITVDEFQDTNSLQMSLLGHL--VGPEHNVCVVGDDDQSIYGWRGAQI 255 Query: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL 540 S F F L+ YR + I + AN I+ N G+ K L + G +AV L Sbjct: 256 SNILEFERFFPNPSVIKLEENYRCTAPILDTANALIRHNLGRRDKTLRA-HKGGGEAVRL 314 Query: 541 L 541 + Sbjct: 315 I 315 >UniRef50_A8SMG4 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SMG4_9FIRM Length = 750 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 88/339 (25%), Positives = 146/339 (43%), Gaps = 44/339 (12%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV + LLVLAGAGSGKT VL + + + S +IL + F KA +E Sbjct: 7 LNNKQLEAVEHFGSPLLVLAGAGSGKTKVLTTKIAYAVLEKNVSEYEILAITFTNKAGKE 66 Query: 257 MDERIRERLHTEDITAR---TFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 M ERI E + DI++ TFH++ I++ +K+ + +L + E K Sbjct: 67 MKERI-ENIFKRDISSMWIGTFHSICSKILRFNIEKIGYSNNFTIYDRDDQKLVLKEIFK 125 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 Q + W G F + +++ + A+ + Sbjct: 126 Q-----------------NLTWESVLGEFKN----------------AIIGIISDAKGKN 152 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRFI 428 + S+ F ++ + K ++ L NA+DF LI + I + +K + Sbjct: 153 VKSSEFSKYFSFGNNTDVVEKIYKKYEEILIKNNALDFDDLIFKTIELFKKCPEVLDYYS 212 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 +K+I VDE+QD + + ++ L + AVGD Q+IY + GA +S F Sbjct: 213 EKFKYIYVDEYQDTNDAQYEIIKLLASKYKNVC--AVGDIDQSIYGWRGANISNILNFEN 270 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 +F + L+ YR +I + AN I+ N + +K L Sbjct: 271 DFPNSKIILLEENYRSTQKILDCANELIKNNVNRKEKNL 309 >UniRef50_C2UN36 ATP-dependent DNA helicase, UvrD/REP n=3 Tax=Bacillus cereus RepID=C2UN36_BACCE Length = 719 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 108/413 (26%), Positives = 176/413 (42%), Gaps = 69/413 (16%) Query: 188 FFRQVESSP--LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQIL 245 +FR +E LN Q AV + +L +A AGSGKT VL +R G+L+ +IL Sbjct: 71 YFRALEEKNIFLNENQIEAVRTIDKPVLAIAAAGSGKTRVLASRVGYLMCVANVDASRIL 130 Query: 246 LLAFGRKAAEEMDERIR-----ERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDT 300 +L F RKAA EM +RI + I A TFH++ L I++ I+S Sbjct: 131 VLTFTRKAANEMKQRIAGLPGISKSVLNIIVAGTFHSVFLRILRSRGYDQRILS------ 184 Query: 301 AARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWV 360 +EK ++ + + + + +D E + ++ + +V Sbjct: 185 ---------------NEK------FKHIIIKNILKKYKYQDAYDPETVLSLISYYKNTFV 223 Query: 361 SLMRMHGGAQAEMIASAPEE--IRDLFSKRIKLMAPLLKAWKGALKAENAVDFSG-LIHQ 417 + PE ++ K IK + + WK N +DF L++ Sbjct: 224 T----------------PENLPVKTPIEKEIKTIYHSYEEWKAD---NNQMDFDDILLYT 264 Query: 418 AIVILEKGRFI----SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIY 473 ++LE + + + + HILVDE+QDIS + ++ L Q +F VGDD Q +Y Sbjct: 265 YQLLLEDYQLLELLQNKFLHILVDEYQDISLLQQMIVKML--AYPQKLIFGVGDDGQTVY 322 Query: 474 RFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSL-TN 532 F G+ L F + + L+ YR N I + N I+ N Q KK L + + Sbjct: 323 SFRGSDPKLILDFPNEYPGAKVIKLEVNYRSNPYIVGLGNAVIKNNKVQFKKELRAFKAD 382 Query: 533 GDKKAVTLLDESQLDA--LLDKLSGYAKPEER----ILILARYHHMRPASLEK 579 G K + +S +A ++ + K E R I +L R H + A +E+ Sbjct: 383 GPKPIYSSPADSDEEAINIVQSIKSAIKSETRQFKDIAVLYRTHAVSRAIVEQ 435 >UniRef50_C6XGC2 DNA helicase II n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XGC2_LIBAP Length = 685 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 92/359 (25%), Positives = 159/359 (44%), Gaps = 44/359 (12%) Query: 197 LNPAQARAV-VNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN Q AV + + LL+LAGAG+GKT+VL+AR L+ E P +IL + F +A + Sbjct: 30 LNAQQTHAVTIPDDTPLLILAGAGTGKTTVLIARMLHLICHKEIPPSKILAMTFTNQAIQ 89 Query: 256 EMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQC 315 EM R+ L + +TFH+ I+++ + V L D A Sbjct: 90 EMKNRLACYLGEKIPRIQTFHSFCASILRKHGE----VVGLPTDFAIL------------ 133 Query: 316 SEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIA 375 A+++ + L +++Q D + + ++D W + G ++ Sbjct: 134 --DSAESRTIIKQLLKDLQID-------DKDYDPHEVIEKIDYW----QNRGWNPKDIPQ 180 Query: 376 SAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWK--- 432 S+ ++ ++ + + L+ + DF GLI + I +L + + Sbjct: 181 SS-------LTEDAEIPKAIYIQYVAYLQKTKSCDFGGLIIKTIEVLHHPHVLKKYHEKI 233 Query: 433 -HILVDEFQDI-SPQRAALLAALRKQNSQ--TTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 +I+VDE+QDI +PQ L +K++S+ + VGD+ Q IY + GAQ S F + Sbjct: 234 PYIMVDEYQDINTPQYLLLRLLCQKEDSKQGARICCVGDENQCIYEWRGAQFSHILNFQK 293 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLD 547 +F + L+ YR + I AN+ I N + K L + + A + SQ D Sbjct: 294 DFKDANIIKLEQNYRSTTHILNTANKLISHNKQRFDKKLFTQRDCHDDAKVSIHVSQSD 352 >UniRef50_B1C8W2 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C8W2_9FIRM Length = 741 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 96/352 (27%), Positives = 152/352 (43%), Gaps = 51/352 (14%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 S LN Q AV + LL+LAGAGSGKT ++ R +++ G A P +IL L F KAA Sbjct: 5 SMLNEKQQEAVTCVDGPLLILAGAGSGKTRTIIHRIAYIIENGYAKPWEILALTFTNKAA 64 Query: 255 EEMDERIRER--LHTEDITARTFHALALHIIQQGSKKVPIVSKL----ENDTAARHELFI 308 EM ERI T DI TFH++ I++ + S ++DT + + Sbjct: 65 GEMRERIDSMGIPFTSDIWMGTFHSICARILRIEGHNLGFTSNFSIYDDDDTKRVVKSIL 124 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 + S+K+ +G + ++ L+ L + D GG Sbjct: 125 KDL--DISDKEFPVEGVKSQIS----------------LLKNNLETSDDYLEEHDDFEGG 166 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK---- 424 IA E + KR L + NA+DF L+ ++ K Sbjct: 167 YTEARIAQIYAE----YQKR--------------LLSSNAMDFDDLLLNMNILFAKCPEV 208 Query: 425 -GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 ++ + +K+ILVDE+QD + + A+++ L + + GDD Q+IY + GA + Sbjct: 209 LNKYKNRFKYILVDEYQDTNLSQYAIVSKLAED--HRNICVCGDDDQSIYGWRGASIRNI 266 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDK 535 F E+F + L+ YR I AN I+ N ++ K L T+ D+ Sbjct: 267 LEFEEDFEDAAVIRLEQNYRCTKNILNAANGVIEHNQRRMGKTL--FTDNDE 316 >UniRef50_C8WTI7 ATP-dependent DNA helicase PcrA n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WTI7_ALIAD Length = 756 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 101/342 (29%), Positives = 151/342 (44%), Gaps = 53/342 (15%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV + +LV+AGAGSGKTSVL R +L+A P IL + F KAA E Sbjct: 14 LNEKQREAVTATDGPVLVIAGAGSGKTSVLTRRIAYLIAERRVPPWAILAITFTNKAARE 73 Query: 257 MDERIRERL---HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 M+ERI ERL DI TFHA+ I+++ + S AA + Sbjct: 74 MEERI-ERLVGPVASDIWTSTFHAMCARILRRDIHHLGYTSAFTVLDAADQVSLV----- 127 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 + L +EM V K + R +H +Q + Sbjct: 128 -------------RRLMQEMNIDV--------RKFEPRAV-----------LHAISQHKN 155 Query: 374 IASAPEEIRDLF-SKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRF 427 + E+ DL S K++ + A++ L+ A+DF L+ + + + K + Sbjct: 156 ELRSAEKALDLAGSPYDKMVGDVYLAYERRLRENQALDFDDLLVKTVELFRKVPDVLAYY 215 Query: 428 ISPWKHILVDEFQDISPQRAAL--LAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 + HI VDE+QD + + L L A R++N L VGD Q+IY + GA + Sbjct: 216 QHRFSHIHVDEYQDTNHAQYVLVKLLAERRRN----LCVVGDSDQSIYGWRGADIRNILE 271 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 F ++ + L+ YR RI +AN+ IQ N +L+K L Sbjct: 272 FQRDYPDARVIRLEQNYRSTGRILRIANQVIQHNQMRLEKNL 313 >UniRef50_C4XGR7 ATP-dependent DNA helicase n=4 Tax=Desulfovibrio magneticus RS-1 RepID=C4XGR7_DESMR Length = 646 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 91/338 (26%), Positives = 143/338 (42%), Gaps = 53/338 (15%) Query: 213 LVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTED--I 270 LV+A GSGKT + R G L+ +PE IL L + R+AAE+M ER+ LH E + Sbjct: 46 LVVAVPGSGKTKTMTERIGRLVNDHGVAPENILGLTYTRQAAEQMRERLELVLHGEASRV 105 Query: 271 TARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLT 330 T H+ L +++ + IVS E T +A + K G Q + Sbjct: 106 NLYTIHSFCLRLLKSEGRYFNIVSGSEQMT------MVATIMRSLGVKDLAIGGVLQDI- 158 Query: 331 EEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFS--KR 388 S+ + N +PEE DL+ + Sbjct: 159 -----SLAKSN---------------------------------CISPEEFIDLYGEDQS 180 Query: 389 IKLMAPLLKAWKGALKAENAVDFSGLIHQAIVIL--EKG--RFISPWKHILVDEFQDISP 444 + A + K ++ DF L+ QA L E G ++ + HILVDE+QD +P Sbjct: 181 KQKTAMVFKEYEEQKTIRYLYDFDDLLLQAYRFLAHEGGAEKYHDVYPHILVDEYQDTNP 240 Query: 445 QRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRF 504 + A+L AL ++ + + +A GDDWQ+IY F+GA + F + F + L+ YR Sbjct: 241 AQLAVLQALIAESGRGSFWACGDDWQSIYAFNGASIGNILRFKQIFPSAQEIVLNVNYRS 300 Query: 505 NSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD 542 I + I N ++ K L + G + ++D Sbjct: 301 TPAILAACQKLIDHNQRKIPKELIAHKPGGNHDLFVID 338 >UniRef50_C7NAU4 UvrD/REP helicase n=5 Tax=Fusobacteriaceae RepID=C7NAU4_LEPBD Length = 735 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 95/362 (26%), Positives = 164/362 (45%), Gaps = 48/362 (13%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q +A E +L+LAGAGSGKT + R ++ SP IL L F KAA E Sbjct: 8 LNEEQRKAAEKIEGPVLILAGAGSGKTRTVTYRIAHMVKEIGISPLNILALTFTNKAARE 67 Query: 257 MDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M ER + E ++ TFH+ ++ +++ S+++ ++ + +K Sbjct: 68 MKERAAALIGHEANNLVVSTFHSFSVRLLKTYSERIGY--------GRNFNIYDVDDQKS 119 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQ-RRLASRLDRWVSLMRMHGGAQAEM 373 K + G + D++ +Q +LA+R +S ++ G E+ Sbjct: 120 IITKIKKEMGIK-----------------DNDNVQPGKLANR----ISKLKEQGIGIKEL 158 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG----RFIS 429 EI D+ +L + + + LKA NA+DFS L+ A +L+ R Sbjct: 159 ----EREI-DMRIPANRLFGEIYQKYDEVLKANNAMDFSDLLLNARKLLDDTFVLERIQE 213 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 +K+I+VDE+QD + + ++ + + + VGD+ Q+IY F GA ++ F + Sbjct: 214 RYKYIVVDEYQDTNDIQYEMINMIAAK--YRNICVVGDEDQSIYAFRGANINNILNFERD 271 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL-NSLTNGDK----KAVTLLDES 544 + E L+ YR +I + AN I+ N K L ++G+K A+T+ DE+ Sbjct: 272 YKEAFTVKLERNYRSTKKILDTANELIKNNKSSKGKTLWTDGSDGEKIKIYNAMTVYDEA 331 Query: 545 QL 546 Sbjct: 332 DF 333 >UniRef50_B8DM59 UvrD/REP helicase n=5 Tax=Bacteria RepID=B8DM59_DESVM Length = 1244 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 95/323 (29%), Positives = 139/323 (43%), Gaps = 60/323 (18%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 NPAQ RA+ G +LVLAG G+GKT LV R L+ G +IL + F R+AA E Sbjct: 560 FNPAQRRALAAGPQPVLVLAGPGTGKTRTLVGRVLHLVETG-IDARRILAVTFTRRAAAE 618 Query: 257 MDERIRERLHTEDITART--FHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 MDER+ L + RT HALA + + P+ L ++ AAR Sbjct: 619 MDERLATALGEDAPLPRTDTLHALAFEYWHRATPTPPV---LLSEEAARRVF-------- 667 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 A+A DE QR + W E I Sbjct: 668 -----AEAN--------------------PDEPAQRLREA----W------------EAI 686 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHI 434 E++R ++ APLL + A N D++ L+ + ++ + SPW+H+ Sbjct: 687 GVCREKMRSCLAEH----APLLARYTEQKAAWNLADYTDLLEFWLDQMQNNIYASPWRHV 742 Query: 435 LVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGE 494 LVDE QD+SP + L+ AL + F +GD Q+IY F GA + E + + Sbjct: 743 LVDEIQDLSPLQLTLVRALAPRGG-AGFFGIGDPDQSIYGFRGAHGDVAAFLREAWPDLS 801 Query: 495 RCDLDTTYRFNSRIGEVANRFIQ 517 L+ YR ++RI + A +Q Sbjct: 802 VVALEENYRSSARILDFAGGLMQ 824 >UniRef50_B1I553 ATP-dependent DNA helicase PcrA n=6 Tax=Bacteria RepID=B1I553_DESAP Length = 718 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 93/342 (27%), Positives = 148/342 (43%), Gaps = 49/342 (14%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + LNPAQA AV + LLVLAGAGSGKT VL +R +L+ P +IL + F +AA Sbjct: 11 TELNPAQAEAVCHPGGPLLVLAGAGSGKTRVLTSRIAYLVRVHRVEPHRILAITFTNRAA 70 Query: 255 EEMDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM ER+ + +D+ TFHA L I+++ +K+ A + I + Sbjct: 71 REMKERVASLVPHAVDDLWVMTFHAACLRILRREIEKLGYSKNFVIYDEADQQTVIKDCL 130 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 K+ + + Q + + W Q Sbjct: 131 KELNLEPRQHPP--AMFSAAISW----------------------------------QKN 154 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAI-------VILEKG 425 + E + + +L A + A++ L+ NA+DF L+ A+ +LE+ Sbjct: 155 ALVGPAEFAGAAYDQHQELTARVYAAYQARLERNNALDFDDLLFLAVRLFREFPPVLEQY 214 Query: 426 RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 R + H+LVDE+QD + + L+ L + + T+ VGD Q IY + GA + Sbjct: 215 R--RRFLHLLVDEYQDTNHAQYVLVNLLAQTHRNLTV--VGDPDQCIYGWRGADLRNILN 270 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 F ++ + L+ YR RI E AN I+ N + +K L Sbjct: 271 FERDYPDARVVKLEQNYRSTGRILEAANHVIRFNRHRKEKEL 312 Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust. Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 12/71 (16%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 Q+ MT+H++KG + V + G++EG FP A PVE EERRL Y Sbjct: 551 QVTLMTLHSAKGLEFPVVFLTGMEEGV--FPHT-------RAFSEPVE---MEEERRLCY 598 Query: 648 VALTRARHRVW 658 V +TRAR R++ Sbjct: 599 VGITRARERLF 609 >UniRef50_Q98PM4 ATP-DEPENDENT HELICASE PCRA n=1 Tax=Mycoplasma pulmonis RepID=Q98PM4_MYCPU Length = 734 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 92/344 (26%), Positives = 160/344 (46%), Gaps = 44/344 (12%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 S LN Q AVV + L ++AGAGSGKT V+ ++ +L+ + +P +IL L F KAA Sbjct: 3 SNLNQRQKEAVVYTKGPLRIIAGAGSGKTRVITSKIAYLIEHEKIAPWKILGLTFTNKAA 62 Query: 255 EEMDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM ER + + + TFH+L I++Q K+ E + E Sbjct: 63 REMKERALKMIGPKASHVELSTFHSLCNVILKQDIDKIGYPKNFE---------IVDE-- 111 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 S+KK KG + E+ + + + WD D +++ M+ + + Sbjct: 112 ---SDKKQILKG----IYLELAITTKDVSIWD----------AFD-YIAKMK-----KNK 148 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVI-----LEKGRF 427 +S EE+ + + + L+ + K + LK ++ +DF LI + L + ++ Sbjct: 149 YFSSIEEELDNENEEDLALLKNIYKGYVSYLKKQSLLDFDDLIILTYELFSSSDLTRQKW 208 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 S + ++LVDEFQD S + ++ L S + VGD Q IY + G+ + F Sbjct: 209 ASKYDYVLVDEFQDTSFIQYEIVKVLA---SNKNITIVGDPDQNIYSWRGSDFRIMLNFD 265 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLT 531 ++F + + + YR I E+AN+ I+ N +++K L S + Sbjct: 266 KDFENTKTINFEQNYRSTPNILEIANKLIKNNKNRMEKNLFSTS 309 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 13/73 (17%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPD--AEERRL 645 Q+ MT H++KG + DYV I GL E FP L D+ D EERRL Sbjct: 547 QVSIMTAHSAKGLEFDYVFITGLAEKH--FP---------HFLSLKSNDYDDEIEEERRL 595 Query: 646 MYVALTRARHRVW 658 YVA+TRA+ +++ Sbjct: 596 CYVAVTRAKKQLF 608 >UniRef50_Q6MND7 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MND7_BDEBA Length = 672 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 96/363 (26%), Positives = 163/363 (44%), Gaps = 59/363 (16%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q +AV + LL+LAGAGSGKT+VLV+R G L++ A ++I +L F KAA E Sbjct: 7 LNPEQQKAVKHNFGPLLILAGAGSGKTTVLVSRTGRLISERVAQAQEICVLTFTNKAARE 66 Query: 257 MDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKL----ENDTAARHELFIAE 310 + R+ +L + + A TFH+ L I+++ K + ++D A + I + Sbjct: 67 LKHRVGAKLGSSGSGMWAGTFHSFGLQILRRFHKHAGLSPYFGIVDQSDCNAIVKDLIKD 126 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 + +K +D +K+ + R R Q Sbjct: 127 IKNSGKDK------------------------FDADKILNMINDR--------RTGMAPQ 154 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFI-- 428 E D + + ++++ P + L+ VDF GL+ + I + ++ I Sbjct: 155 TEAF--------DEYHEMVEVLTP---KFTKRLEHLGVVDFEGLLIKPITLFKENPEILE 203 Query: 429 ---SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 + ++VDEFQD + + L+A + K S + VGDD Q+IY + GA++ Sbjct: 204 KVQGMFTQVMVDEFQDTNRLQMDLIAQIVK--SHNNIAVVGDDDQSIYGWRGAEVKNILN 261 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNP---GQLKKPLNSLTNGDKKAVTLLD 542 F + F E L+ YR ++ I VAN I +N G++ +P + G + +LD Sbjct: 262 FPQEFTPCEVIKLERNYRSSAEILAVANAAISKNKNRHGKILRPQVAEDTGQLPELFILD 321 Query: 543 ESQ 545 + Sbjct: 322 REE 324 >UniRef50_Q5NVY5 ATP-dependent DNA helicase n=2 Tax=Archaea RepID=Q5NVY5_9ARCH Length = 1075 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 105/362 (29%), Positives = 154/362 (42%), Gaps = 43/362 (11%) Query: 187 DFFRQVESS---PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQ 243 DFF ES+ PLN Q AV ++LV AGAG+GKT+++ A+A +L+ PE+ Sbjct: 2 DFFSWFESTTGKPLNDRQKDAVRCDTGAVLVSAGAGTGKTTMITAKAAYLIKEKSLKPER 61 Query: 244 ILLLAFGRKAAEEMDERIRERL-HTEDITARTFHALALHIIQQGSKKVPIVSKL----EN 298 +L+L F R AA M E I + + D TA TFHA L I+ G I + E Sbjct: 62 LLMLTFSRDAAAHMKEEIEKVVPEARDATANTFHAFCLDILVAGESDTGIDERYRLLDEK 121 Query: 299 DTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDD-EKLQRRLASRLD 357 D FI C E + ++T +Q + G W D E +L + + Sbjct: 122 DGG-----FIL-----CKEAGVPPRLASHYIT-SIQRAKDMGLTWADYEGYLGQLEASMR 170 Query: 358 RWVSLMRMHGGAQAEMIASAPEEIRDLFS----KRIKLMAPLLKAWKGALKAENA----- 408 + A A + E+ +D + K+I L + +KG LK A Sbjct: 171 EICPEEDIESAAGAATVRLRTEQFKDKQAREEKKKITEFLELFEEYKGYLKFLEAWKKYE 230 Query: 409 --------VDFSGLIHQAI-VILEKGRFI--SPWKHILVDEFQDISPQRAALLAALRKQN 457 +D++ +I I +G + + +++VDEFQD + Q+ LL L Sbjct: 231 QIKAQKLLLDYADMIRLTIDYARARGHEVLADKFDYVIVDEFQDTNRQQYELLKILAGDG 290 Query: 458 SQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQ 517 T+ VGD Q+IY F GA F E + DL YR I A R I+ Sbjct: 291 KGITV--VGDVNQSIYGFRGAYPENIDTFKEEYRPAT-FDLTENYRSTDSILRTAYRLIR 347 Query: 518 QN 519 N Sbjct: 348 NN 349 >UniRef50_C8XDJ8 ATP-dependent DNA helicase PcrA n=2 Tax=Actinomycetales RepID=C8XDJ8_NAKMY Length = 864 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 106/394 (26%), Positives = 174/394 (44%), Gaps = 76/394 (19%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q AV + LLV+AGAGSGKT VL R +LLA G A P +IL + F KAA E Sbjct: 39 LNPPQREAVEHRGAPLLVVAGAGSGKTRVLTRRIAYLLAVGGAQPGEILAITFTNKAARE 98 Query: 257 MDERIRERLHTEDIT--ARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M +R+ + + + TFH++ + I++ + ++ + Sbjct: 99 MKDRVTDLVGGRGRSMWVSTFHSMCVRILRAEATQIGL---------------------- 136 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 K + Q ++ + V G D +K R+ L +S ++ E+I Sbjct: 137 ----KTTFTIYDQADSQRLAQLVAGGLNIDTKKYPARM---LAASISNLKN------ELI 183 Query: 375 ASAPEE-IRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISP--- 430 PE + S + L+A + + ++ L+A +A+DF LI Q + +L++ ++ Sbjct: 184 --DPETALERADSDQATLVAKVYQGYQERLRAASALDFDDLIMQTVFLLQRHPAVAEHYR 241 Query: 431 --WKHILVDEFQDISPQRAALLAAL-----RKQNSQTT----------------LFAVGD 467 ++H+LVDE+QD + + L+ AL +Q +T L VGD Sbjct: 242 RRFRHVLVDEYQDTNHAQYLLVKALVGGTADEQEVRTADGELVRAAASEVPPAELVVVGD 301 Query: 468 DWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 Q+IY F GA + F ++ + L+ YR I AN I +NP + K L Sbjct: 302 ADQSIYAFRGATIRNIVEFERDYPNAQTIMLEQNYRSTQTILSAANSVIARNPQRRAKNL 361 Query: 528 NSLTNGDKKAVTLL-----DESQ-----LDALLD 551 + G + + DE+Q +DAL+D Sbjct: 362 WTAQGGGTRITGYVGDNEHDEAQFVGKEIDALVD 395 >UniRef50_D1B9M8 UvrD/REP helicase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9M8_THEAS Length = 653 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 101/355 (28%), Positives = 155/355 (43%), Gaps = 67/355 (18%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q AV + + L+LAGAGSGKT VL + +L++ SP +IL + F KAA E Sbjct: 13 LNPKQVEAVTYCDGNQLILAGAGSGKTRVLTRKIAYLISHKGVSPSKILAVTFTNKAAGE 72 Query: 257 MDERIRERL---HTEDITARTFHALALH-------IIQQGSKKVPIVSKLENDTAARHEL 306 M +R+ ERL I TFH+ L+ I+++ P+V +D +L Sbjct: 73 MRQRV-ERLLGGSLHGIRICTFHSYGLNFLRRNEEIMRRMGYATPLVVIDRSDQKRLLKL 131 Query: 307 FIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMH 366 + E E++ WL E + EGN Sbjct: 132 LLKE--NNVDERRVDP----SWLMEAFSAAKGEGN-------------------GSAYFR 166 Query: 367 GGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR 426 G AQ L +A++ ++++ A+DF LIH + IL R Sbjct: 167 GEAQR-----------------------LFEAYEAKMRSQGALDFDDLIHLPLKILSTHR 203 Query: 427 F-----ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMS 481 + + +LVDE+QD++ + LL L + +T + VGD QAIY + GA +S Sbjct: 204 EALERELDSIEWVLVDEYQDVNRSQYMLLKRLSSRGQRTVV--VGDPDQAIYGWRGADVS 261 Query: 482 LTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL-NSLTNGDK 535 + F ++F + L+ YR I E AN I +N + KK L + + G+K Sbjct: 262 MILNFDKDFQGAKVTVLEQNYRSTGHILEGANCVIARNSDRPKKNLWTAASRGEK 316 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 21/97 (21%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFP-AAARESIMEEALLPPVEDFPDAEERRLM 646 ++ +T+HA+KG + V +VGL+EG FP A RE + +LL EERRL Sbjct: 541 RVSLLTLHAAKGLEFPVVFMVGLEEGI--FPNAKCRE---DRSLLE--------EERRLF 587 Query: 647 YVALTRARHRVW-------ALFNKENPSPFVEILKNL 676 YV +TRA+ R++ LF +PF L + Sbjct: 588 YVGMTRAQERLFLSGAARRVLFGSFMMNPFSRFLSEI 624 >UniRef50_P57654 ATP-dependent DNA helicase rep n=4 Tax=Buchnera aphidicola RepID=REP_BUCAI Length = 645 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 95/341 (27%), Positives = 153/341 (44%), Gaps = 47/341 (13%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN +Q AV L+LAGAGSGKT V++ + +L+ + P+ I + F KAA E Sbjct: 3 LNFSQKNAVELTNGPCLILAGAGSGKTKVIINKIIYLINHCQYEPDNIAAVTFTNKAAYE 62 Query: 257 MDERIRERLHT---EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 M R+ + L+ + I TFH+L L II+ K++ + N T + I +K Sbjct: 63 MRIRLSKYLNIPEIKKIIISTFHSLGLEIIK---KEIDALELNNNFTLLDEKDQILLLKK 119 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 C K + K Q L ++L + W + + Q ++ Sbjct: 120 IC---KKEIKNNIQLL--------------------KKLNFMISYWKN--KFLTPLQVQL 154 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISP-WK 432 +A + +E K A + + + L N +DF LI ++L+ + I W+ Sbjct: 155 LAKSSQE---------KDFAYVYEQYTNYLYKANILDFDDLICMPTLLLKNNKKIKIRWQ 205 Query: 433 ----HILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 ++LVDE+QD + + L+ L +NS TL VGDD Q+IY + GA + Sbjct: 206 KKISYLLVDEYQDTNNSQYELIKMLANKNSDFTL--VGDDDQSIYSWRGANPQNIFLLKK 263 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS 529 +F + ++ YR + RI + AN I N L+K L S Sbjct: 264 DFPNLKIIKMEHNYRSSGRILKAANSLIANNIHYLEKKLFS 304 >UniRef50_UPI0001BC8A6C UvrD-like helicase IV n=1 Tax=Pseudomonas syringae pv. tabaci ATCC 11528 RepID=UPI0001BC8A6C Length = 289 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 59/157 (37%), Positives = 89/157 (56%), Gaps = 4/157 (2%) Query: 527 LNSLTNGDKKAVTLLDESQLDAL---LDKLSGYAKPEERILILARYHHMRPASLEKAATR 583 +N LT +A D+S+ + + + +++ A + LAR+ H P L+ A R Sbjct: 1 MNELTVSLVRAALSDDQSKTEVIERTVARINQIASAGSSVYFLARFKHELP-DLDGYAAR 59 Query: 584 WPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEER 643 +P L +IH+SKG++ADYVI++GL +G G P+ + EAL P E +P AEE Sbjct: 60 YPNLSFKNDSIHSSKGKEADYVILLGLSKGKYGLPSEIVTHPLIEALQPKAEAYPHAEEH 119 Query: 644 RLMYVALTRARHRVWALFNKENPSPFVEILKNLDVPV 680 RL YVALTRA+HRV+ + + SPFV L + P+ Sbjct: 120 RLFYVALTRAKHRVYLICDMLRCSPFVRELIDGQYPL 156 >UniRef50_C7M335 UvrD/REP helicase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M335_ACIFD Length = 715 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 106/352 (30%), Positives = 154/352 (43%), Gaps = 70/352 (19%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP+Q AV +LVLAGAGSGKT VL R WLLA GE P IL + F KAA E Sbjct: 9 LNPSQREAVSAPIGPVLVLAGAGSGKTRVLTRRVAWLLAAGE-RPSSILAITFTNKAAGE 67 Query: 257 MDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M ER+R + + + + TFHA +++ Sbjct: 68 MAERVRSLVGPNADGLWVSTFHAACARMLRL----------------------------- 98 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 + G R WS+ + + D +L R RLD AQ + Sbjct: 99 ----HPELGGLRSG------WSIYDQD--DARRLLERTIRRLDLDTKRFPPRAIAQQVSL 146 Query: 375 ASA----PEEIRD----LFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR 426 A A PE D L+ +++ ++ ++++ AL NA DF LI + +G Sbjct: 147 AKARLVDPERFTDEAEGLYERQVAMV---YRSYQAALAEANAADFDDLIGLVV----EGL 199 Query: 427 FISP---------WKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSG 477 P ++H+L+DE+QD +P + A +A L ++ ++FAVGD Q+IY F G Sbjct: 200 ATRPELAEHWRRRFRHVLIDEYQDANPAQHAFVAELVGRSG--SVFAVGDVDQSIYAFRG 257 Query: 478 AQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS 529 A S F E F + L+ YR + I +AN I +N + K L S Sbjct: 258 ADPSGVLTFEERFDGAKVVTLEQNYRSTNAILGLANAVIAKNRRRYAKHLFS 309 >UniRef50_A9WKU6 DNA helicase II n=2 Tax=Bacteria RepID=A9WKU6_RENSM Length = 797 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 97/364 (26%), Positives = 157/364 (43%), Gaps = 54/364 (14%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q AV + LL++AGAGSGKT VL R +LLA G A P QIL + F KAA E Sbjct: 34 LNPEQEAAVTHAGSPLLIVAGAGSGKTRVLSHRIAYLLATGRAHPGQILAITFTNKAAAE 93 Query: 257 MDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLE-NDTAARHELFIAEWRK 313 M ERI + +++ TFH+ + I+++ + V + S D+A L R Sbjct: 94 MRERIAALIGDAAKNMWISTFHSSCVRILRREASTVGLNSSFSIYDSADSLRLITLIARG 153 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVP--EGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 + K ++ + MQ + + DD+ Sbjct: 154 LDLDPK-------RFAPKAMQHKISALKNELIDDDAFA---------------------- 184 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPW 431 A+ P E + +A + + + L+ NA+DF LI Q + + ++ + Sbjct: 185 -ATATDPFE---------QGVAEVYRGYTQRLRQANALDFDDLIAQTVWLFRAFPGVADY 234 Query: 432 -----KHILVDEFQDISPQRAALL-----AALRKQNSQTTLFAVGDDWQAIYRFSGAQMS 481 +H++VDE+QD + + AL+ A + L VGD Q+IY F GA + Sbjct: 235 YRRRFRHVMVDEYQDTNHAQYALVKEIVGPAEGSGDEPAELTVVGDSDQSIYAFRGADIR 294 Query: 482 LTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL 541 F +++ L+ YR I AN I++NP + K L + +K + + Sbjct: 295 NIVEFEKDYPNARTIKLEQNYRSTQTILSAANAVIEKNPDRPVKRLWTAEGDGEKIIGYV 354 Query: 542 DESQ 545 E++ Sbjct: 355 AENE 358 Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 23/99 (23%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + MT+H +KG + V + G++ G FP A + +E AEERRL YV Sbjct: 598 VTLMTLHTAKGLEFPAVFLTGMEHGI--FPQARSATDAKEL----------AEERRLAYV 645 Query: 649 ALTRARHRVW-------ALFNKE--NP-SPFV-EILKNL 676 LTRAR R++ +L+ + NP SPF+ E+ NL Sbjct: 646 GLTRARKRLYLTRAEVRSLWGQSQYNPASPFIDEVPANL 684 >UniRef50_C1XMD9 ATP-dependent DNA helicase, Rep family n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XMD9_MEIRU Length = 706 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 100/352 (28%), Positives = 155/352 (44%), Gaps = 56/352 (15%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 S LNP+Q AV++ E LV+AGAGSGKT +V R +LL P +IL + F KAA Sbjct: 6 SSLNPSQQEAVLHFEGPALVVAGAGSGKTRTVVHRIAYLLRERRVYPAEILAVTFTNKAA 65 Query: 255 EEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM ER+ + + D+ TFHA A+ I++ + V + R I + Sbjct: 66 GEMKERLEKMVGRPARDLWVSTFHAAAVRILRTYGEYVGL----------RPGFVIYDED 115 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 Q + K K E++ G F + +DR ++ G AE Sbjct: 116 DQNTLLKEVLK--------ELELEAKPGPFR----------AMIDR----IKNRGAGLAE 153 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE--------- 423 + AP+ I + A + + ++ L+ + A+DF+ L+ I + E Sbjct: 154 YMREAPDFIGGVPK---DAAAEVYRKYQSGLRMQGALDFNDLLLLTIELFEQHPEVLHKV 210 Query: 424 --KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMS 481 + RFI VDE+QD +P + L L + L VGD Q+IY F A ++ Sbjct: 211 QQRARFIH------VDEYQDTNPVQYKLTRLL--AGERPNLMVVGDPDQSIYGFRSADIN 262 Query: 482 LTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNG 533 F +++ L+ YR +S I VAN I++N +L+K L G Sbjct: 263 NILDFTKDYPGARVIRLEENYRSSSSILRVANAVIEKNALRLEKVLRPTRPG 314 >UniRef50_C3LBP3 ATP-dependent DNA helicase, UvrD/REP family n=82 Tax=Bacillus RepID=C3LBP3_BACAC Length = 688 Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 105/382 (27%), Positives = 165/382 (43%), Gaps = 64/382 (16%) Query: 165 DIESARLQHNQAYTEAMLTEYAD--FFRQVESSP--LNPAQARAVVNGEHSLLVLAGAGS 220 DI A + T ++ E AD +FR +E LN Q AV E +L LAGAGS Sbjct: 15 DIPRATYHIPKTSTHLIMEEDADAAYFRALEQQNVFLNEKQLEAVRTTEGPVLTLAGAGS 74 Query: 221 GKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERI-----RERLHTEDITARTF 275 GKTSVL R G+L+ + P ILLL F +KAAEE+ R+ + + A TF Sbjct: 75 GKTSVLTTRVGYLVNVKQVHPRNILLLTFTQKAAEEIRNRVANLPGMNHAASSYVVAGTF 134 Query: 276 HALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQW 335 H++ L KL ++ E KQ KK + +E++ Sbjct: 135 HSVFL--------------KLLRSQGYNQQILANEKHKQIMIKK---------ILKELRL 171 Query: 336 SVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAP--EEIRDLFSKRIKLMA 393 + +D E + LA +SL + ++ A P +E ++++ + Sbjct: 172 K----DAYDAETM---LA-----MISLEKNKLNRPKDVKAKTPVEQEFKEVYER------ 213 Query: 394 PLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RFISPWKHILVDEFQDISPQRAA 448 ++ + N +DF ++ + +LE + + +I VDEFQD S + Sbjct: 214 -----FEEVKQRYNYIDFDDILLETYYMLENNAPLLTQLQQRFHYIEVDEFQDTSYAQYE 268 Query: 449 LLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRI 508 ++ L + + LF GDD QAIY + GA + +F + F L+T YR N I Sbjct: 269 IVKLL--ASPRNNLFIAGDDDQAIYGWRGASHQIILSFPKEFDNTTIIALNTNYRSNPFI 326 Query: 509 GEVANRFIQQNPGQLKKPLNSL 530 + N I+ N + K L S+ Sbjct: 327 VGLGNEVIKLNQERFDKELYSV 348 >UniRef50_D2R9Y0 Putative ATP-dependent DNA helicase PcrA n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2R9Y0_GARVA Length = 1023 Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 94/354 (26%), Positives = 155/354 (43%), Gaps = 47/354 (13%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q++AV +LL+ AGAGSGKT VL R W+L++ A P QIL + F KAA E Sbjct: 144 LNPQQSQAVQYDGPALLIGAGAGSGKTRVLTRRIAWILSQKGAWPSQILAITFTNKAAAE 203 Query: 257 MDERIRERLHTEDIT--ARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M ER+ + + +E T TFH+ + I+++ + + + S + E + Sbjct: 204 MRERLSKLIGSEANTMWVSTFHSACVKILRRSGQYIGLKSGFSIYDTSDCERLV------ 257 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLAS---RLDRWVSLMRMHGGAQA 371 K L +++ P + L + +LD + + + G Sbjct: 258 --------KIIATELNVDIKRFTPRSILGKISDCKNSLITWREQLDMYANDYK--PGVAG 307 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVIL----EKGRF 427 + IA A + A + ++ L NAVDF LI + + ++ E ++ Sbjct: 308 QQIAHA--------GNSEAVYATIYAEYQHRLSQANAVDFDDLIMRTVQLMREVPEAAQY 359 Query: 428 I-SPWKHILVDEFQDISPQRAALLAAL-------------RKQNSQTTLFAVGDDWQAIY 473 +++ILVDE+QD + + L+ L ++ N+ ++ VGD Q+IY Sbjct: 360 YRHKFRYILVDEYQDTNHAQYELIRELAGVDVKQNSANPSQQNNTPASITVVGDSDQSIY 419 Query: 474 RFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 F GA + F ++F L+ YR I + AN I N G+ K L Sbjct: 420 AFRGADIRNIQDFEKDFPNATTIMLEQNYRSTQTILDAANAVISHNQGRKPKKL 473 >UniRef50_D1PL59 ATP-dependent DNA helicase n=4 Tax=Ruminococcaceae RepID=D1PL59_9FIRM Length = 871 Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 95/388 (24%), Positives = 160/388 (41%), Gaps = 86/388 (22%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEAS---------------- 240 LNP Q +AV E LL+LAGAGSGKT+VLV R ++ G A Sbjct: 23 LNPVQRQAVFTTEGPLLILAGAGSGKTTVLVNRIANIIRFGSAHGSKELPRTVTQQDLED 82 Query: 241 ------------------------PEQILLLAFGRKAAEEMDERIRERLHTE---DITAR 273 P +L + F KAA E+ ER+R L D+ A Sbjct: 83 LRATVQSGRDLPRETAYLAVRPARPWNVLAITFTNKAAGELKERLRAMLGETMGGDVNAS 142 Query: 274 TFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEM 333 TFH+ + I+++ ++++ + Q + +Q ++M Sbjct: 143 TFHSACVRILRRDAERIGFPKSF-----------------TIYDSDDQQRVLKQIYKDKM 185 Query: 334 QWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMA 393 + F + +++S D+ +S ++ A P + + L++ Sbjct: 186 ----IDDKFLPIKSAVSQISSYKDKLMS--------PEDVAAETPRDTK------AALIS 227 Query: 394 PLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRFISPWKHILVDEFQDISPQRAA 448 + + G LK A+DF LI+ + +L+ + + + +++++VDE+QD S + Sbjct: 228 KIYTTYAGRLKTAGAMDFDDLIYHTVRLLQTDAEAREYYQNKFRYVVVDEYQDTSIAQFH 287 Query: 449 LLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRI 508 L+ L + VGDD Q+IY+F GA + F + F + L+ YR S I Sbjct: 288 LVRLL--AGGTNNVCVVGDDDQSIYKFRGATIENILNFEQVFTGAKTIRLEQNYRSTSNI 345 Query: 509 GEVANRFIQQNPGQLKKPL-NSLTNGDK 535 AN I+ N G+ K L +GDK Sbjct: 346 LNAANSVIKNNTGRKGKTLWTEKGDGDK 373 Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 18/73 (24%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFP---AAARESIMEEALLPPVEDFPDAEERRL 645 + MTIH++KG + YV +VG+++G FP A E ME EERRL Sbjct: 606 VTMMTIHSAKGLEFPYVFVVGMEDGI--FPGDMARYNEEDME-------------EERRL 650 Query: 646 MYVALTRARHRVW 658 YVA+TRA+ ++ Sbjct: 651 CYVAITRAKKELY 663 >UniRef50_C4G2S8 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2S8_ABIDE Length = 768 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 91/343 (26%), Positives = 150/343 (43%), Gaps = 47/343 (13%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q +AVV+ LL+LAGAGSGKT VL R +L+ SP IL L F KAA E Sbjct: 7 LNPEQKKAVVHENGPLLILAGAGSGKTRVLTRRIAYLIKEYGVSPWNILALTFTNKAARE 66 Query: 257 MDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M ER+ E + E+I TFH+ + ++++ + K+ D + ++ Sbjct: 67 MRERVDELIEEGAENIWVSTFHSACVKMLRR------FIDKIGYDRS--FNIY------D 112 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 + KA K + L + + PE + + + A+ + I Sbjct: 113 TDDTKAVVKQVLKALNIDNK-EFPEK--------------------TCLNVISNAKNDFI 151 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FIS 429 + + F + A + ++ +K NA+DF ++ + + + + + + Sbjct: 152 DAEEFAVNSKFGVDNNVYARVYSEYEKRMKNNNALDFDDILVKTVELFQTDKDTLEYYQR 211 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNS-----QTTLFAVGDDWQAIYRFSGAQMSLTT 484 +++ILVDE+QD + + LL L + + L VGDD Q+IY+F GA + Sbjct: 212 RFRYILVDEYQDTNIVQFKLLKLLANYVNEDGEIENNLCVVGDDDQSIYKFRGADIRNIL 271 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 F + + L+ YR I E AN I N + K L Sbjct: 272 NFEKIYPNALVIKLEENYRSTGNILEAANGVISNNKERKDKRL 314 >UniRef50_C6C0S1 UvrD/REP helicase n=3 Tax=Desulfovibrionales RepID=C6C0S1_DESAD Length = 1034 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 94/330 (28%), Positives = 144/330 (43%), Gaps = 61/330 (18%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 N AQ +AV G +LV+AG G+GKT L+ R LL RG + +IL L F RKAAEE Sbjct: 463 FNEAQNKAVEAGPDPVLVIAGPGTGKTQTLMGRIKHLLERGTRA-RRILALTFTRKAAEE 521 Query: 257 MDERIRERLHTEDITAR--TFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M++R+R L +++ R T HALAL PI+ L +TA R + Sbjct: 522 MNDRMRSMLGDDEVLPRADTLHALALEYWASAFDHDPII--LNEETARR---VFGRANPE 576 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 + K ++ WD L R E + Sbjct: 577 LNSAKLKSA-------------------WDSISLARE------------------TLETL 599 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHI 434 + P EI L + N VD++ L+ + L+ +++ + H+ Sbjct: 600 SEGPAEI--------------LANYTRQKDQYNLVDYTDLLEFWLSELKSDKYVRTFTHV 645 Query: 435 LVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGE 494 LVDE QD+SP + A++ L + + LFA+GD Q+IY F GA ++ F + Sbjct: 646 LVDEVQDLSPLQLAIVQRLVGDDGE-GLFAIGDPDQSIYGFRGAAGNVANRFRAFWENLI 704 Query: 495 RCDLDTTYRFNSRIGEVANRFIQQNPGQLK 524 + L+ YR + + A+ + +NP QLK Sbjct: 705 KITLEDNYRSAQGVLD-ASASVLENPPQLK 733 >UniRef50_C3WAC5 DNA helicase II n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WAC5_FUSMR Length = 939 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 89/337 (26%), Positives = 153/337 (45%), Gaps = 46/337 (13%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV + E LL+++G GSGKT LV RA +LL + PE I L F K+A E Sbjct: 3 LNEKQYEAVRSTEGPLLLISGPGSGKTRTLVERAIYLLVEKKVKPENIFLSTFTEKSARE 62 Query: 257 MDERI-------RERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIA 309 + RI E+++ ++ T H++ L +I + + + FI Sbjct: 63 LLVRISDRIKESNEKININEMYIGTLHSIFLRMIDENIEYSFFRDGYRVLDDIDQQFFIY 122 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 K+ SE +G+R + + +P N W+ K ++ W++ + G Sbjct: 123 SRIKRFSE----IEGYRDFFKD-----IPGINSWERSK-------KILWWLNKIN-EEGK 165 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFIS 429 + + I + +++I + + + L EN +DF+ + + IL + + Sbjct: 166 RLDNIRTE--------NRKILFLKEAHRVYHEMLVEENLMDFTTIQRELYRILHREEVLE 217 Query: 430 PWK----HILVDEFQDISP--QRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 + +I++DE+QD + ++ + +K+N + VGDD Q IYRF GA + Sbjct: 218 KLQNRIEYIMIDEYQDTNTIQEKIIFMLGAKKEN----ICVVGDDDQGIYRFRGATVRNI 273 Query: 484 TAFHENFGEGERC---DLDTTYRFNSRIGEVANRFIQ 517 F E F +G RC +LD YR + I NR+I+ Sbjct: 274 LRFPERFEKG-RCKKINLDINYRSHEDIIRFCNRWIK 309 >UniRef50_A7VTM6 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VTM6_9CLOT Length = 740 Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 85/341 (24%), Positives = 156/341 (45%), Gaps = 50/341 (14%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 +NP Q AV++ E LL+LAGAGSGKT+VL+ R +++ + A P QIL + F KAA E Sbjct: 11 MNPRQLEAVLHTEGPLLILAGAGSGKTTVLINRIAYIIDQSLAKPWQILAITFTNKAAGE 70 Query: 257 MDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKL---ENDTAARHELFIAEW 311 + ER+ L D+ A TFH+ I+++ ++ S + D + R Sbjct: 71 LKERLTAMLGDTGGDVWAATFHSTCARILRRDGDRIGYSSHFTVYDTDDSKR-------- 122 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 L ++ Q ++ DD+ + + S++ A+ Sbjct: 123 -----------------LVKDCQKALN----IDDKMISHK---------SILSEISHAKD 152 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----R 426 M++ A + R+ + + + ++ L+ +A+DF L+ + + + Sbjct: 153 SMLSPADYQAAAGSDFRLAKIGAVYELYQKRLREADAMDFDDLLGNTVELFRQCPDVLEY 212 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + + +++I+VDE+QD + + + L +++ L VGDD Q+IY+F GA + +F Sbjct: 213 YQNRFRYIMVDEYQDTNQVQYEFVRLLAEKSKN--LCVVGDDDQSIYKFRGATIENIMSF 270 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 +++ + L+ YR I AN I N + K L Sbjct: 271 EKSYPNAKVIRLEQNYRSTKNILNAANAVISNNEERKGKTL 311 >UniRef50_C0B1B2 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0B1B2_9ENTR Length = 94 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 41/59 (69%), Positives = 54/59 (91%) Query: 1 MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLAIHCKRGLVWGELEF 59 MELK+T +G+RLAQHPY+R +LNAGI+VSG++H+YLIPFN+L+ I CK+G+VWGELEF Sbjct: 1 MELKSTPMGQRLAQHPYNRVKLLNAGIEVSGEKHQYLIPFNELINIFCKKGIVWGELEF 59 >UniRef50_C5VHV2 ATP-dependent DNA helicase PcrA n=20 Tax=Bacteroidales RepID=C5VHV2_9BACT Length = 851 Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 92/354 (25%), Positives = 155/354 (43%), Gaps = 50/354 (14%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 S LN +Q AV LV+AGAGSGKT VL + +LL +G P IL L F KAA Sbjct: 12 SALNESQREAVEYCTGPSLVIAGAGSGKTRVLTYKIAYLLNKG-LKPWNILALTFTNKAA 70 Query: 255 EEMDERIRERLHTED---ITARTFHALALHIIQQGSKKVPIVSKL----ENDTAARHELF 307 EM ERI + +D + TFH++ I+++ + + S END+ + + Sbjct: 71 REMKERIAQITTAKDAQHLYMGTFHSIFARILRREGEAIGFGSNFTIYDENDSRSLIKSI 130 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 + EK + +++ + + +D R A DR Sbjct: 131 VKAL--DLDEKTYKPASVHNFISMAKNHLITASEYAED-----RAAIERDR--------- 174 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRF 427 S R+ + + KA++ + NA+DF ++ ++ + Sbjct: 175 ------------------SARMPAIHMIYKAYEARCRQANAMDFDDILLYTFLLFRDNKE 216 Query: 428 I-----SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 I +++ILVDE+QD + + ++++ L + + + + VGDD+Q+IY F GA + Sbjct: 217 IREKYGQQFEYILVDEYQDTNYAQVSIISQLAETHRRICV--VGDDYQSIYSFRGANIDN 274 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSL-TNGDK 535 F F + + L+ YR I + AN ++ N Q+ K + S GDK Sbjct: 275 ILDFKHKFDDAKLFKLERNYRSTQLIVQAANSLMKHNERQIPKDVFSKEAEGDK 328 Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 22/93 (23%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 ++ MTIHA+KG + V +VGL+E + FP+ S E EERRL+Y Sbjct: 569 KVTLMTIHAAKGLEFPTVFVVGLEE--NIFPSPMSASSKREI----------EEERRLLY 616 Query: 648 VALTRA-RHRV---------WALFNKENPSPFV 670 VA+TRA RH + + +NPS F+ Sbjct: 617 VAITRAERHCILTNAKNRFRYGSMQVDNPSRFL 649 >UniRef50_B0S125 DNA helicase II n=2 Tax=Finegoldia magna RepID=B0S125_FINM2 Length = 613 Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 90/375 (24%), Positives = 159/375 (42%), Gaps = 50/375 (13%) Query: 201 QARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDER 260 Q +A+ + E LVLA G+GKT+VL+ R +L P+ IL + F + A +M ER Sbjct: 7 QQKAISHYESPALVLAVPGAGKTTVLLNRIKYLEKVHNVDPKSILSITFSKSQAMDMKER 66 Query: 261 IRERL-HTEDITARTFHALALHIIQQGSKKVPIVSK-LENDTAARHELFIAEWRKQCSEK 318 E+ T+ T H+ +II+ K + K LE++ L I ++ ++ Sbjct: 67 FSEKFPETDSAYFSTIHSFCYYIIKLYYKMNNRIFKILESNNDTNKYLVIRNIMRKINKT 126 Query: 319 KAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAP 378 ++ DE +++ ++ +G + MI Sbjct: 127 NSK-----------------------DEDVEK-----------FLQYYGYCKNMMI---- 148 Query: 379 EEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFI-----SPWKH 433 I+D I+ + + ++ K +DF ++ ++ IL + +I +K Sbjct: 149 --IKDFPKFDIENFEQIYQEYESFKKKNFFIDFDDMLTKSFEILNEDEYILKRIKRKYKF 206 Query: 434 ILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEG 493 VDE QD S + L+ + + LF V DD Q+IY F GA S F++ F Sbjct: 207 FQVDEGQDTSKIQFELIKKIAY--PENNLFIVADDDQSIYSFRGADPSYLLDFNKIFSNA 264 Query: 494 ERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKL 553 +D +R + +I +N FI+QN + K + S +KK + ++ L +L L Sbjct: 265 SIYYIDQNFRCSDKIVNASNLFIKQNKNRYNKDVTSTKASNKKIIIKFPQNFL-SLYSYL 323 Query: 554 SGYAKPEERILILAR 568 P+++ IL R Sbjct: 324 KNNINPDKKTAILYR 338 >UniRef50_A5IY88 ATP dependent helicase n=2 Tax=Mycoplasma RepID=A5IY88_MYCAP Length = 734 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 94/345 (27%), Positives = 152/345 (44%), Gaps = 47/345 (13%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN + A+ + L ++AGAGSGKT VL + +L+ SP+ IL + F KAA Sbjct: 17 SLNEEETEALYYFDGPLRIIAGAGSGKTRVLTRKIAYLINVLGISPDHILAVTFTNKAAS 76 Query: 256 EMDERIRERLHTE----DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 EM ER+++ +T+ TFH+L I+++ + + L+ND + Sbjct: 77 EMSERVKQYTNTKFNKGTAEISTFHSLCARILREEAFHI----NLKNDFQIIDD------ 126 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 ++KK K + +E + NF L R+ S ++ A Sbjct: 127 ----NDKKKILKD----IYKEHDLVPTDSNF-----------KNLTRFFSWLKNKLYASD 167 Query: 372 E----MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-R 426 E I S PE F + + + + LK ++DF L+ + + K Sbjct: 168 EEIIDFINSDPES---EFYGDGETVVKIYNFYNEQLKHLQSLDFDDLLIKVNELFYKNPE 224 Query: 427 FISPW----KHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + W +ILVDEFQD S + ++ L Q +Q T+ VGD Q IYR+ GA ++L Sbjct: 225 IVKKWALKYSYILVDEFQDTSAIQYEIIKYLSSQKAQLTI--VGDPDQTIYRWRGADVNL 282 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 +F ++F + L+ YR +I AN I+ N + K L Sbjct: 283 ILSFEKDFENTKTIILNKNYRSTKKILAAANNLIKYNRNRFNKNL 327 >UniRef50_B6FTD7 Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTD7_9CLOT Length = 723 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 99/347 (28%), Positives = 153/347 (44%), Gaps = 49/347 (14%) Query: 201 QARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDER 260 Q A+ + ++LV AG G+GKT+ LVAR ++L G SP +I +L F RKAA+E++ER Sbjct: 282 QKMAIERFDQAMLVCAGPGAGKTATLVARVDYMLTNG-ISPGRIFVLTFTRKAAQEVEER 340 Query: 261 IRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKA 320 I H T HALA II+Q HE +I RK ++ Sbjct: 341 IS---HDMKPNISTIHALAFQIIRQ------------------HE-YILGKRKLVNQTDC 378 Query: 321 QAKGWRQWLTEEMQWS--VPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAP 378 Q Q L + + S + N+ Q LA L + + + A AE Sbjct: 379 Q-----QLLLQVLNCSPIIKNVNYQKLTGKQGLLALLLSDFCFIQKFGVAAYAEQFP--- 430 Query: 379 EEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRFISPWKH 433 K I+ + + K + +A + F I A+ +LE + + + + + Sbjct: 431 -------KKDIETIVAIKKLYDQKFQAGGYIRFDEQISLAVWLLEQFPGIRKKLQNMYSY 483 Query: 434 ILVDEFQDISPQRAALLAALRKQ-NSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGE 492 ILVDE QDI + L+ L ++ N + +F GD QAIY F G F + + E Sbjct: 484 ILVDEAQDIDEMQGKLIRLLVEESNPKIAIF--GDTDQAIYGFRGGSNKFMLEFLQLYPE 541 Query: 493 GERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS-LTNGDKKAV 538 L+ +R + I ++ANR I N ++ + S L+ G K V Sbjct: 542 ALEIKLNDNFRSSKEILDMANRLISHNKTRVPMQMVSHLSTGRKPMV 588 >UniRef50_Q0AHY9 ATP-dependent DNA helicase UvrD n=16 Tax=Betaproteobacteria RepID=Q0AHY9_NITEC Length = 748 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 96/343 (27%), Positives = 143/343 (41%), Gaps = 49/343 (14%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + LNP Q AV S L+LAGAGSGKT VL R +LL G P+ +L + F KAA Sbjct: 6 TDLNPEQLEAVTWPHQSALILAGAGSGKTRVLTTRIAYLLQSGLTQPQNLLAVTFTNKAA 65 Query: 255 EEMDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM RI L + + TFH L +++ + + + A I Sbjct: 66 REMVARISTMLPINIRGMWIGTFHGLCHRMLRAHYEDAGLPQAFQILDMADQLAVIKRIL 125 Query: 313 KQCS-EKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 K+ S ++K A QW F ++ K + AS++D S R Sbjct: 126 KERSLDEKVLAPRQLQW-------------FINNAKEEGLRASQVDTRGSFNRT------ 166 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFI--- 428 +A + ++ VDF+ L+ + +L + + Sbjct: 167 --------------------LAECYQVYEAVSMRGGTVDFAELLLRCYELLSRNEILRDH 206 Query: 429 --SPWKHILVDEFQDISPQRAALLAALRKQNSQ--TTLFAVGDDWQAIYRFSGAQMSLTT 484 ++HILVDEFQD + + + L SQ +FAVGDD Q+IY F GA + Sbjct: 207 YRGRFEHILVDEFQDTNRLQYQWIKLLAGSGSQQHAAIFAVGDDDQSIYAFRGAHVGNMR 266 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 ++F + L+ YR I + AN I+ N G+L K L Sbjct: 267 DLEKDFSVPKIIRLEQNYRSQGNILDAANALIENNKGRLGKNL 309 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/121 (36%), Positives = 58/121 (47%), Gaps = 33/121 (27%) Query: 575 ASLEKAATRWPKLQ--IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLP 632 ASLE + Q + MT+HA+KG + V I GL+EG FP E+ E Sbjct: 539 ASLEGGEHQAEGYQDAVQLMTVHAAKGLEFHSVFISGLEEGL--FP---HENSRNE---- 589 Query: 633 PVEDFPDA--EERRLMYVALTRARHRVWALFNKEN----------PSPFV-----EILKN 675 P+ EERRLMYVA+TRAR R++ + + PS FV E+LK Sbjct: 590 -----PNGLEEERRLMYVAMTRARQRLYLSYAESRMLHGQVRVNVPSRFVDEIPEELLKR 644 Query: 676 L 676 L Sbjct: 645 L 645 >UniRef50_B2GM51 ATP-dependent DNA helicase UvrD1 n=10 Tax=Actinomycetales RepID=B2GM51_KOCRD Length = 818 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 103/352 (29%), Positives = 147/352 (41%), Gaps = 59/352 (16%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV + LL++AGAGSGKT VL R LLA G A +IL + F KAA E Sbjct: 40 LNEPQRAAVEHSGAPLLIVAGAGSGKTRVLTHRIAHLLATGRARRGEILAITFTNKAAAE 99 Query: 257 MDERIRERLHTEDITA--RTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M ERI E + T TFH+L + I+++ +K + + + +A I + KQ Sbjct: 100 MRERIAELVGDSARTMWISTFHSLCVRILRREAKTLGLNTNFSIYDSADSLRLITQVAKQ 159 Query: 315 --CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 K+ K + + S + DDE R +S Sbjct: 160 HELDPKRFAPKAIQHRI------SALKNELVDDETCLARASS------------------ 195 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAI-------VILEKG 425 D F + A + + + L+A NA+DF LI + + +LE Sbjct: 196 ---------TDPFESAV---AQVYRGYTQRLRAANAMDFDDLIGETVHMFRAFPQVLEYY 243 Query: 426 RFISPWKHILVDEFQDISPQRAALLAALRKQNS----------QTTLFAVGDDWQAIYRF 475 R ++H+LVDE+QD + + AL+ L +S L VGD Q+IY F Sbjct: 244 R--RRFRHVLVDEYQDTNHAQYALVRELVGGDSPGHTDESGIPPAELTVVGDSDQSIYAF 301 Query: 476 SGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 GA + T F +F L+ YR I AN I QN + K L Sbjct: 302 RGADIRNITDFERDFPAARTIMLEQNYRSTQNILSAANAVISQNADRRDKKL 353 >UniRef50_Q1IVP8 ATP-dependent DNA helicase, Rep family n=2 Tax=Bacteria RepID=Q1IVP8_ACIBL Length = 849 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 87/337 (25%), Positives = 152/337 (45%), Gaps = 53/337 (15%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q AV +L+LAGAGSGKT V+ R +L+ + SP+ IL + F KAA E Sbjct: 7 LNPQQREAVETVHGPVLILAGAGSGKTRVITYRIAYLIEKVGVSPDSILAMTFTNKAAAE 66 Query: 257 MDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCS 316 M ER+ H++ + P++S H + R+ Sbjct: 67 MQERVE------------------HLVGGRTLAKPVISTF-------HSFCVRVLRRDIE 101 Query: 317 EKKAQAKGWRQWLT---EEMQWSVPEGNF----WDDEKLQ-RRLASRLDRWVSLMRMHGG 368 + KG+R+ E Q S+ + DD++L R + SR+ Sbjct: 102 ALQINGKGYRKDFAIYDESDQQSLVKSAMKRLGIDDKQLTVRNVLSRI------------ 149 Query: 369 AQAEMIASAPEEIR-DLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE---- 423 + A+ P+E+ +++ +A + K ++ L NA+DF L+ +L+ Sbjct: 150 SHAKNHLLDPQEVYLQSGDPKVERIAQIYKVYESELAKANALDFDDLLLMTNKLLKTSTE 209 Query: 424 -KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + R+ ++++L+DE+QD + + ++ AL + + AVGD+ Q+IY + GA + Sbjct: 210 VRERYNRRFQYVLIDEYQDTNRPQYEIMRAL--AGTLHNVCAVGDEDQSIYSWRGADIRN 267 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQN 519 F ++F E + L+ YR I E A+ ++ N Sbjct: 268 ILEFEQDFPEAKIVRLEQNYRSTQNILEAASAVVKNN 304 Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust. Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 12/66 (18%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 Q+ MT+HA+KG + V IVG++EG FP++ L+ P E EERRL Y Sbjct: 628 QVTLMTMHAAKGLEFPLVFIVGMEEGL--FPSS-------RTLMNPDE---VEEERRLCY 675 Query: 648 VALTRA 653 V +TRA Sbjct: 676 VGMTRA 681 >UniRef50_Q5KJH7 ATP-dependent DNA helicase pcra, putative n=2 Tax=Filobasidiella neoformans RepID=Q5KJH7_CRYNE Length = 982 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 88/336 (26%), Positives = 155/336 (46%), Gaps = 33/336 (9%) Query: 197 LNPAQARAVVNGEH-SLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN AQ +AV L +LAG GSGKT VL R +L+ + SP +I+ + F K+A Sbjct: 17 LNQAQLKAVTASPSVPLQILAGPGSGKTRVLTCRVAYLVQHHKYSPNEIVAVTFTNKSAN 76 Query: 256 EMDERIRERL---HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM +R+++ L + + TFHA + +++ K + L N+ F+ Sbjct: 77 EMRKRLQKLLGDKQADQLVLGTFHATCVKYLRRYGKLI----NLSNN-------FVIADA 125 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 + C + + R+ +E S+ EG + +S + G Sbjct: 126 EDCKKIMSGILKSRKAALDEASMSLKEGVVLSE--------------ISKAKAKGEPPEA 171 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVIL-EKGRFISPW 431 M A + ++ F+ + ++A L + ++ AL N++DF L+ A+ + E R + Sbjct: 172 MAIRAAQN-KNAFTNTLAVIADLYEEYQLALTEANSLDFDDLLLYALRLFKEAPRVVENI 230 Query: 432 KHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFG 491 +HILVDEFQD + + LL K + ++ VGD Q+IY + A++ ++F Sbjct: 231 RHILVDEFQDTNTTQYELLKRFAKAHKGVSV--VGDPDQSIYGWRSAEIENLNKMTKDFP 288 Query: 492 EGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 E L+ YR I + A+ + Q+ +++K L Sbjct: 289 GVEAIYLEENYRSTGSILDAAHAIVSQDRQRIQKSL 324 >UniRef50_A7Z3H2 YjcD n=3 Tax=Bacillus RepID=A7Z3H2_BACA2 Length = 761 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 109/425 (25%), Positives = 182/425 (42%), Gaps = 66/425 (15%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q +AV + LLVLAGAGSGKT VL ARA ++ SPE +LL+ F KA E Sbjct: 137 LNREQMKAVTETDGPLLVLAGAGSGKTRVLTARAAHMIEHLGISPENMLLVTFTTKAVAE 196 Query: 257 MDERIRERL-----HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 M ER+ + TFH+ I+ ++ +L EW Sbjct: 197 MKERMANEYGLAAGKVSRLVTGTFHSFFYKILYH----------YDSSKWNGSQLLKMEW 246 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 +K+ KKA L EE ++ E F D+ LQ + W + H Sbjct: 247 QKEQYVKKA--------LYEE---NLDEKEFPVDQALQ-----LIGCWKNTYLPH----- 285 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GR 426 E I A D + K++ L + ++ + + DF + + + + Sbjct: 286 ETIPLA-----DDWEKKVYR---LYEHYERQKREKRQFDFDDMAQGCYELFQSRPDILAQ 337 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + + + HIL+DEFQDI+P + ++ + + + L VGDD Q+IY F G+ S F Sbjct: 338 YQNRFSHILIDEFQDINPVQYNIMQMI--ASPENNLCCVGDDDQSIYAFRGSSPSFILDF 395 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL--LDES 544 +++ + L YR I A+ +++N + +K L+++ +G V DE Sbjct: 396 QKDYPAAKTIYLTANYRSPHPIVSSAHAVVKKNKKRYEKTLSAVKDGVHNPVMFYPYDEE 455 Query: 545 QLDALL-----DKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKG 599 + ++ +K+ A P++ ++ R S +A + +L + HA +G Sbjct: 456 EEATMIVSDMKEKIQNGASPDDFAVLY------RTNSAGRAI--YERLHQSSIPYHADRG 507 Query: 600 QQADY 604 Q Y Sbjct: 508 VQTFY 512 Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 11/94 (11%) Query: 565 ILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARES 624 LA HMR A K ++ +TIH SKG + + V I+G +GS P Sbjct: 647 FLAHVDHMRAAENLKTDENG----VELLTIHRSKGLEFNTVYILGAADGS--IPHDFALE 700 Query: 625 IMEEALLPPVEDFPDAEERRLMYVALTRARHRVW 658 + P+E EERRL+YVA+TRA ++ Sbjct: 701 TARQGDPAPLE-----EERRLLYVAMTRAMQHLY 729 >UniRef50_UPI00016C0C66 ATP-dependent DNA helicase PcrA n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0C66 Length = 731 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 91/350 (26%), Positives = 149/350 (42%), Gaps = 67/350 (19%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q +AV + LL+LAGAGSGKT VL R L+ + P +IL + F KAA E Sbjct: 3 LNDRQKKAVQHVNGPLLILAGAGSGKTRVLTQRIANLIENHQVQPWEILAITFTNKAAAE 62 Query: 257 MDERIRERLHTEDITAR----TFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 M ER+ + ED+ TFH++ + I+++ + + +A ++ I + Sbjct: 63 MRERMTNDV-GEDVLKNMWISTFHSMCVRILRRFGESIGYTKYFTIYDSAEQKITIKDVM 121 Query: 313 KQ--CSEKKAQAKG-WRQWLTEEMQWSVP-------EGNFWDDEKLQRRLASRLDRWVSL 362 K+ +EK+ Q + +++ Q+ +P EGNF Sbjct: 122 KEMNINEKEFQVGAVFSHISSKKNQFILPRQALKESEGNF-------------------- 161 Query: 363 MRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVIL 422 R H ++A + A++ L N +DF L+ ++ Sbjct: 162 -REH------------------------IIAKIYDAYQDKLYENNVMDFDDLLVNVCILF 196 Query: 423 EK-----GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSG 477 + + +K+ILVDE+QD + + L+ L + L VGDD Q+IY + G Sbjct: 197 NNHPDVLSFYQNKFKYILVDEYQDTNCVQYELIRQL--ADKHKNLCVVGDDDQSIYGWRG 254 Query: 478 AQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 A +S F ++F L+ YR I E AN ++ N + K L Sbjct: 255 ADISNILEFEKDFENTTIIKLEQNYRSTKNILEAANAVVKNNENRKPKVL 304 Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 10/70 (14%) Query: 591 FMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVAL 650 MT+H+SKG + V + GL+EG FP+ S ++ L EERRL YV + Sbjct: 550 LMTLHSSKGLEFPVVFMPGLEEGL--FPSHMSASDEDKTKLE--------EERRLCYVGI 599 Query: 651 TRARHRVWAL 660 TRAR +++ L Sbjct: 600 TRAREKLYIL 609 >UniRef50_B9X9R1 UvrD/REP helicase n=1 Tax=bacterium Ellin514 RepID=B9X9R1_9BACT Length = 689 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 106/383 (27%), Positives = 175/383 (45%), Gaps = 72/383 (18%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 S LNP Q A +L+LAGAG+GKT V+ R ++ RG A P IL + F KAA Sbjct: 5 STLNPQQRMAAETIRGPVLILAGAGTGKTRVITFRIAHMIERGVA-PGSILAVTFTNKAA 63 Query: 255 EEMDERIRERL----------HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARH 304 EM ER+ + + E T TFH+L + I++Q +K+ + Sbjct: 64 REMQERVNKLIPRPSKKSRDEKPERPTLCTFHSLCVRILRQHIEKL----------GYKK 113 Query: 305 ELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMR 364 I + +E+ K ++ + + + P + + L ++ Sbjct: 114 NFVIYDQ----TEQLGAIKKILSQVSAKGEKTDPAA-----------ILAMLSKY----- 153 Query: 365 MHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKA-WKGALKAENAVDFSGLIHQAIVILE 423 +GG+QA A + IK MA ++ ++ AL+A NAVDF LI + + E Sbjct: 154 KNGGSQAAAFAD----------ESIKAMAEHIRTRYESALRACNAVDFDDLILLTLRLFE 203 Query: 424 ---------KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYR 474 + RF ++I+VDE+QD + + +L+ L K++ L VGDD Q+IY Sbjct: 204 EHPDALEACRNRF----RYIMVDEYQDTNASQFSLVHYLTKEHRN--LCVVGDDDQSIYG 257 Query: 475 FSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGD 534 + GA++S ++F E + L+ YR + I AN I+ N + K L S G Sbjct: 258 WRGAEISNLLDMEKHFPEVKVVKLEQNYRSTNVILTAANAVIKNNLRRRGKQLWS-DKGQ 316 Query: 535 KKAVTL----LDESQLDALLDKL 553 +TL DE++ A+++++ Sbjct: 317 GTKITLHTFESDEAEAKAIVEQI 339 >UniRef50_UPI0001C42BC3 ATP-dependent DNA helicase n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42BC3 Length = 785 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 91/345 (26%), Positives = 151/345 (43%), Gaps = 55/345 (15%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 L+ Q A E LL+LAGAGSGKT VL RA ++L SP+Q++L+ F KAA+E Sbjct: 148 LDDQQWNAATTTEGPLLILAGAGSGKTRVLTTRAAYMLTEKNYSPKQMILVTFTAKAAKE 207 Query: 257 MDERIR-----ERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 M ER+ + + + TFH++ ++ + + L +W Sbjct: 208 MKERMTIYPGVTKGALQQLVVGTFHSIFYRMLMH----------YDFEKWNSQHLLKWDW 257 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 +K K+A + + E F D+ L +++ W + M+ Sbjct: 258 QKDQILKEAGR-----------EIDLDEKEFAYDQAL-----TQISWWKNHMQ------- 294 Query: 372 EMIASAPEEI--RDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG---- 425 P EI +D++ +R A L K ++ ++ DF ++ +L Sbjct: 295 -----NPNEIKPKDIWEER---AAYLYKRYEQMRTSKRLFDFDDMLLGCYDLLTTNQALL 346 Query: 426 -RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 R+ + ++ +DEFQDI+ + L+ L + ++ L VGDD Q+IY F G+ Sbjct: 347 ERYQERFAYVSIDEFQDINKVQVELITLLTE--TKRNLCVVGDDDQSIYAFRGSDPDYIL 404 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS 529 F ++ E + C LD YR I E AN I N + K L++ Sbjct: 405 NFKSDYPEAKVCVLDQNYRSTHPIVESANNVITTNKTRFNKQLHA 449 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 13/73 (17%) Query: 586 KLQIDFMTIHASKGQQADYVIIVGLQEGS---DGFPAAARESIMEEALLPPVEDFPDAEE 642 K + +TIH +KG + +V I+G EGS D A RE +D P EE Sbjct: 679 KTAVQLLTIHRAKGLEYKHVYILGANEGSLPHDYALDAWREG----------DDKPLEEE 728 Query: 643 RRLMYVALTRARH 655 RRLMYVA+TRA++ Sbjct: 729 RRLMYVAMTRAKN 741 >UniRef50_A7AXS4 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AXS4_RUMGN Length = 625 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 92/346 (26%), Positives = 154/346 (44%), Gaps = 54/346 (15%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 N Q + E ++ V+A AGSGKT+VL R ++ P IL + F +KA E Sbjct: 3 FNKQQEETINTIEGNVAVIATAGSGKTTVLTHRIKKMVEEHNILPSSILAITFSKKAKEN 62 Query: 257 MDERIRERLHTEDITARTFHALALHIIQQ--GSKKVPIVSKLENDTAARHELFIAEWRKQ 314 ++E++ E L+ +++ TFH+ AL II G KK I + W K+ Sbjct: 63 INEKLME-LNISNVSVETFHSFALKIISSVYGIKKFKI--------------WTTPWEKE 107 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 + K W+ + N +E + +++L + + + + Sbjct: 108 KTIK---------WICSDSLLLCDSDNVPYNE---------ITSFIALQKNNMKTPNDDL 149 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVI-------LEKGRF 427 P+ + + M + K ++ + + ++F ++ A I LEK R Sbjct: 150 IYTPDP-----PFKEEDMKQIYKTYEEYKEINSLIEFDDFLNMANKIFDTDYYTLEKYRN 204 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 I +++ILVDEFQDIS +A LL RK N++ T+ VGD QAIY F G F Sbjct: 205 I--FQYILVDEFQDISISQALLL---RKLNTKNTMI-VGDPLQAIYSFRGGDSRFILNFD 258 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNP-GQLKKPLNSLTN 532 ++ + + +L+T YR + I AN+ P Q K + S++N Sbjct: 259 TDYKDVKVINLNTNYRCSKDIVFTANKLALSIPDSQHKNYVESISN 304 >UniRef50_A0Q2Q4 ATP-dependent DNA helicase PcrA, putative n=23 Tax=Clostridium RepID=A0Q2Q4_CLONN Length = 760 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 99/365 (27%), Positives = 163/365 (44%), Gaps = 61/365 (16%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q A E +LVLAGAGSGKT VL R ++ IL + F KAA E Sbjct: 7 LNKEQYEAATAIEGPVLVLAGAGSGKTRVLTYRIAHMIEDLGIPQYNILAITFTNKAAGE 66 Query: 257 MDERIRERLHTEDITA---RTFHALALHIIQQGSKKVPIVSKLE-NDTAARHELFIAEWR 312 M +RI+ +L + +I + TFH+ + I+++ K+ D+ + L Sbjct: 67 MKDRIK-KLVSNNIDSMWVSTFHSSCVRILRREIDKLGYNKNFAIYDSTDQKNLV----- 120 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 KQC + E N D + ++ + S++ G Q + Sbjct: 121 KQC---------------------MKELNISDKDINEKEIISKI-----------GKQKD 148 Query: 373 MIASAPE----EIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK---- 424 + +A E +D RI A + ++ LK NA+DF LI + + + +K Sbjct: 149 NLITAEEYKKRNEKDFRKNRI---ADVYLLYQKKLKNSNALDFDDLIFKTVELFKKHPEV 205 Query: 425 -GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 + + +K+I+VDE+QD + + L+ L + +F VGDD Q IY++ GA + Sbjct: 206 LEFYQNKFKYIMVDEYQDTNKTQYQLVKMLAA--AHRNIFVVGDDDQCIYQWRGADIKNI 263 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLT-NGDK----KAV 538 F +++ E + L+ YR + I AN I+ N + K L + NG+K +A Sbjct: 264 LDFEKDYPEAKVVKLEENYRSKANILNAANTVIKHNSQRKNKVLRTQNENGEKIKIYRAY 323 Query: 539 TLLDE 543 + +DE Sbjct: 324 SDMDE 328 >UniRef50_Q2NK11 UvrD helicase n=2 Tax=Candidatus Phytoplasma asteris RepID=Q2NK11_AYWBP Length = 761 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 95/364 (26%), Positives = 166/364 (45%), Gaps = 42/364 (11%) Query: 181 MLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEAS 240 M + +F ++ + PLN Q AV + S + AGAG+GKT+ L A+ +L+ + + Sbjct: 11 MFSNKNNFLEKL-NKPLNQTQLAAVTSNAKSFYLAAGAGTGKTTTLTAKIAYLIEQKKLP 69 Query: 241 PEQILLLAFGRKAAEEMDERIRERL---HTEDITARTFHALALHIIQQGSKKVPIVSKLE 297 QIL L F KA ++M E++ + + T+ IT TFH+L I+++ +P Sbjct: 70 SNQILALTFTNKAVKQMKEKLDQMIGKEKTKGITICTFHSLGTQILRKFIPFLPF----- 124 Query: 298 NDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLD 357 + R+ I + K + + +EM P +R S L Sbjct: 125 ---SYRNNFKILD--------DNDCKKILKDILKEMNID-P----------KRVKISELK 162 Query: 358 RWVS-LMRMHGGAQAEMIASAPEEIRDL-FSKRIKLMAPLLKAWKGALKAENAVDFSGLI 415 + +S + R H + + + ++ ++ K+ + P+ ++ L+ N VDF LI Sbjct: 163 KSISDIKRKHEPQNEDTLQHSTQKEKNYQREKKYEFEMPIKVKYQIFLQNNNLVDFDDLI 222 Query: 416 HQAIVILEKGR-----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQ 470 +L++ + ++++LVDEFQD + +L L K++ +F VGD Q Sbjct: 223 LYTHQLLQENANVRVFYQQKFQYLLVDEFQDTDFFQYQILTLLAKEHQ--NIFVVGDPDQ 280 Query: 471 AIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQL-KKPLNS 529 IY F GA+ + F F + + L+ YR + I + AN I+ N L KK L S Sbjct: 281 NIYSFRGARFENSQLFLNKF-KPKIAFLEENYRSSKNILDKANLLIKYNKAHLFKKNLKS 339 Query: 530 LTNG 533 +G Sbjct: 340 TKSG 343 >UniRef50_A5CU47 ATP-dependent DNA helicase n=4 Tax=Actinobacteria (class) RepID=A5CU47_CLAM3 Length = 816 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 100/366 (27%), Positives = 152/366 (41%), Gaps = 61/366 (16%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q AVV +LL++AGAGSGKT VL R L+ EA P QIL + F KAA E Sbjct: 38 LNPEQREAVVYRGPALLIVAGAGSGKTRVLTHRIASLIESREAWPSQILAITFTNKAAAE 97 Query: 257 MDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M ER+ L +E + TFH+ + I+++ ++ +A + I KQ Sbjct: 98 MRERVESLLGQASEGMWISTFHSACVRILRREAEAFGFTQNFTIYDSADSRVLIKRIIKQ 157 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 A G+ S G KL+ L S D + + A+A Sbjct: 158 LD---ADTLGF--------TVSSVSGRI---SKLKNEL-SDADTFARTANFNDPAEA--- 199 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISP---- 430 + + + + +L + NA DF LI Q + + ++ Sbjct: 200 ----------------MFVEIFRQYTRSLASANAFDFDDLIGQTVYLFRAFPKVAALYQR 243 Query: 431 -WKHILVDEFQDISPQRAALLAALRKQNS-------------------QTTLFAVGDDWQ 470 ++H+LVDE+QD + + +L+ L + + +L VGD Q Sbjct: 244 RFRHVLVDEYQDTNHAQYSLIRELTRAVAPEDVPVDTRMSTNGMGGIDGASLTVVGDSDQ 303 Query: 471 AIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL-NS 529 +IY F GA + T F +F + + L+ YR I AN I N + K L S Sbjct: 304 SIYAFRGADIRNITEFERDFPQSKVVLLEQNYRSTQNILTAANAVISNNFDRKDKKLWTS 363 Query: 530 LTNGDK 535 + +GDK Sbjct: 364 IGDGDK 369 >UniRef50_Q31JE9 ATP-dependent DNA helicase UvrD n=3 Tax=Gammaproteobacteria RepID=Q31JE9_THICR Length = 741 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 96/340 (28%), Positives = 149/340 (43%), Gaps = 46/340 (13%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + LN AQ AV + L+LAGAGSGKT VLV R WL S IL + F KAA Sbjct: 8 NDLNDAQRDAVTVEDQHALILAGAGSGKTRVLVHRIAWLTQVMGFSAYNILAVTFTNKAA 67 Query: 255 EEMDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM R+ + ++ +T TFH +A +++ K+V + + + + I Sbjct: 68 SEMRARVEALIGNQSQGMTMGTFHGIAYRLLRTHYKEVGLPQSFQILDSDDQKRVIKRLL 127 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 K AQ W +++Q F + EK + R Sbjct: 128 KALELDDAQ------WPHKQVQ------AFINGEKEEGR--------------------- 154 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRF 427 P I + ++ M + +A++ K VDF+ L+ +A + K + Sbjct: 155 ----RPHHIDPGHNPYVRQMVQIYQAYEEQCKRAGLVDFAELLLRAHELWLKNPQVLAHY 210 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + ++HILVDEFQD + + A L L + + LF VGDD Q+IY + GA++ F Sbjct: 211 QARFRHILVDEFQDTNSLQYAWLRVLAGASGR--LFIVGDDDQSIYGWRGAKIENIRRFD 268 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 E+F + + L+ YR I + AN I N ++ K L Sbjct: 269 EDFSDVKTVRLEQNYRSTGTILKAANGLIAFNQDRMGKNL 308 >UniRef50_B7GLR0 Putative uncharacterized protein n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GLR0_ANOFW Length = 716 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 90/344 (26%), Positives = 152/344 (44%), Gaps = 49/344 (14%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 PL+ Q A + E LLVLAGAGSGKT L RA ++A + ++++ F KAA+ Sbjct: 103 PLDAEQYEAAQHVEGPLLVLAGAGSGKTRTLTTRAAAMIAHHRIQSKNMMIVTFTTKAAK 162 Query: 256 EMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQC 315 E+ +R++ + T TFH+L ++Q + RHE I +W+K+ Sbjct: 163 ELVDRLQSYNLADIPTVGTFHSLFYRMLQHA-----------DPFRWRHERLIRDWQKEK 211 Query: 316 SEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWV-SLMRMHGGAQAEMI 374 K+ +G + E +F DE +Q R+ W +L +H Sbjct: 212 MMKEI-GRG----------IGIDERDFPYDEAMQ-----RISYWKNTLTPLHAIT----- 250 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RFIS 429 I + + +R+ L K ++ + DF +++ +L ++ Sbjct: 251 ------IENEWDERV---VQLYKQYEAKKQQLEWFDFDDMLYACYDMLRTDEKRLRQYHE 301 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 + + L+DEFQDI+ + + L + AVGDD QAIY F G+ S F ++ Sbjct: 302 RFHYFLIDEFQDINSVQYETMKLLASHTHH--ICAVGDDDQAIYAFRGSDSSFIRQFQQD 359 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNG 533 F + L YR I +ANR I ++ ++ K +N+ T+ Sbjct: 360 FPNTKIVKLTENYRSPHPIVSLANRIIAKSRTRIPKQMNAQTDS 403 >UniRef50_A1BEA2 ATP-dependent DNA helicase PcrA n=2 Tax=Chlorobium RepID=A1BEA2_CHLPD Length = 734 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 96/343 (27%), Positives = 151/343 (44%), Gaps = 50/343 (14%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q +AV E ++VLAGAGSGKT V+ R WL+ G AS + IL L F KAA E Sbjct: 8 LNDVQRQAVRATEGPVMVLAGAGSGKTRVITYRIAWLIKNGYASAKNILALTFTNKAAGE 67 Query: 257 MDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCS 316 M R+ D+ ++QQGS + H +F R Sbjct: 68 MRHRV-------DV-----------LLQQGSAGGLWIGTF-------HSIFARLLRNDI- 101 Query: 317 EKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLD---RWVSLMRMHGG-AQAE 372 L + +S+ + + D + L R+ L+ V L + G ++A+ Sbjct: 102 ----------HLLGYDRNFSIFDAD--DSKSLIRQSMGELNISPDSVPLNTLQGIISRAK 149 Query: 373 MIASAPEEIR-DLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFI--- 428 PEE R ++ A + + L+ NA+DF L+ + + + + + Sbjct: 150 NSFILPEEFRRSAGDYNQQIAAKVYDLYTRKLRENNALDFDDLLIKPLELFREHPMVLEA 209 Query: 429 --SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 ++++L+DE+QD + +A LAA +F VGDD Q+IY + GA +S F Sbjct: 210 LQDTFRYLLIDEYQDTN--KAQYLAAKMLSAKHRNIFVVGDDAQSIYSWRGADISNILNF 267 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS 529 +++ + L YR I + AN I+ N Q+KK L S Sbjct: 268 QDDYTDALTFKLVENYRSTGTILQAANSVIRNNLRQIKKELVS 310 Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 14/70 (20%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + MT+HASKG + V I GL+E FP E E EERRL YV Sbjct: 552 VSLMTVHASKGLEFPVVFITGLEERL--FPLNCYEPEQLE------------EERRLFYV 597 Query: 649 ALTRARHRVW 658 A+TRA+ +++ Sbjct: 598 AMTRAQEKIF 607 >UniRef50_P75437 Probable DNA helicase II homolog n=3 Tax=Mycoplasma RepID=UVRD_MYCPN Length = 715 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 94/342 (27%), Positives = 151/342 (44%), Gaps = 62/342 (18%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 S+ LN Q AV G+ +V +GAG+GKT+++ R +L + +P IL L + RKA Sbjct: 6 STQLNKEQRAAVTCGKGVNIVYSGAGTGKTTIISQRFAYLFNQKRINPSNILALTYTRKA 65 Query: 254 AEEMDERIRERL---HTEDITARTFHALALHII-QQGSKKVPIVSKLENDTAARHELFIA 309 A EM +RI E L + +D+ TFH+ + ++G K I L N F+ Sbjct: 66 ASEMKQRILELLPEKYHKDVNIYTFHSFCSRFLREEGQKNFVIDDDLSN--------FLK 117 Query: 310 EWRKQCSEKKAQA-----KGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMR 364 ++ K+ SE K+Q G++ + + DDE+L V L Sbjct: 118 DFLKE-SELKSQKVLQIIDGFKN-----AYFDFDTNSLKDDERL-----------VELCE 160 Query: 365 MHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK 424 H Q E LF + +A ++ KG + N +DF+ L+ + +L K Sbjct: 161 FHLDPQ--------ERNFQLFKETA--IAAFVEYEKGK-QQNNKIDFADLLIKTCTLLSK 209 Query: 425 G-RFISPW----KHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQ 479 + + W ++IL DEFQD + + L+ L + LF VGD+ Q IYR+ GA Sbjct: 210 DHKLLRKWSKKFQYILGDEFQDTNQIQYELIKMLASHHQ--NLFLVGDNNQMIYRWRGAV 267 Query: 480 MSLTTAFHENF----------GEGERCDLDTTYRFNSRIGEV 511 + + +F + RCD + NS +G + Sbjct: 268 SDIIDSLKSDFKVRPENEFYITQNYRCDQNILTVANSILGTI 309 >UniRef50_D1YX62 Putative ATP-dependent DNA helicase n=1 Tax=Methanocella paludicola SANAE RepID=D1YX62_METPS Length = 1087 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 96/359 (26%), Positives = 157/359 (43%), Gaps = 57/359 (15%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q RA+ + ++LV+AGAG+GKT+++ A+A +L+ + PE++++L F R+AA+ Sbjct: 20 LNDEQKRAIEAAKGAILVVAGAGTGKTTMITAKAAYLIKEKKLKPERLIMLTFSREAAKH 79 Query: 257 M-DERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFI------- 308 M DE +R D+ A TFH+ ++ S K I + A + + Sbjct: 80 MKDEIVRILPEARDVYANTFHSFCYEFLRDHSAKTGITDDYQVLDEANAKFLMYKELDVP 139 Query: 309 AEW----------RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDR 358 A W K + +G+ L ++ P + DE S+ Sbjct: 140 AYWVSIYVNTIQRAKDLDISQEAYEGYISRLKAQLDEYAPGASDLADE------VSKATV 193 Query: 359 WVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKL------MAPLLKAWKG--ALKAENA-V 409 ++ M + E A E ++ + I+ L+AWKG LK+E + Sbjct: 194 RINTMHL------EPPTKALREEKNFLTAFIEAYEEHEKYTAFLEAWKGYEKLKSEKKML 247 Query: 410 DFSGLIHQAIVILE---KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVG 466 D++ +I I + + +++VDEFQD + Q+ LL L + T AVG Sbjct: 248 DYADMIKMVIDYCQAWGDDALAELYDYVIVDEFQDTNRQQFKLLKILASKCGDIT--AVG 305 Query: 467 DDWQAIYRFSGAQMSLTTAFHENFGE------GERCDLDTTYRFNSRIGEVANRFIQQN 519 D+ QAIY F G A+ EN GE + +L YR + I A+R I N Sbjct: 306 DENQAIYAFRG-------AYPENIGEFTIDFKADVKNLTENYRSTNAILRTAHRLIVNN 357 >UniRef50_UPI0001BC375D ATP-dependent DNA helicase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC375D Length = 648 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 91/362 (25%), Positives = 164/362 (45%), Gaps = 55/362 (15%) Query: 201 QARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDER 260 Q +A+ + + LVLAG GSGKT+VL R +L+ P +IL++ F + AA EM R Sbjct: 43 QLKAIEFNKGACLVLAGPGSGKTTVLTGRVKYLIDNCHVKPSEILVITFTKAAATEMKNR 102 Query: 261 IRERLHTE-DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKK 319 + +T TFHA+ I++ V + D E R+Q + Sbjct: 103 FTALCGRKLPVTFGTFHAVYFSILKYAYNYT--VDNIIKD----------EVREQIIKDA 150 Query: 320 AQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG-GAQAEMIASAP 378 + TE++ ++ N E +S ++ G A + P Sbjct: 151 VERSNIE---TEDINETI---NLITGE-------------ISRIKTEGIDIDAYYSTNCP 191 Query: 379 -EEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSG-LIHQAIVILEKGRFISPW----K 432 EE + +F + ++ LK + +DF L++ + L++ + W K Sbjct: 192 QEEFKSIFRR-----------YESELKRKRLIDFDDMLLYCRELFLQRKDILLKWQQRYK 240 Query: 433 HILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGE 492 +IL+DEFQDI+ + ++ L + + +F VGDD Q+IY F G++ + F +++ E Sbjct: 241 YILIDEFQDINKVQYDVIRMLAE--PERNIFIVGDDDQSIYGFRGSRPEIMLNFEKDYPE 298 Query: 493 GERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLT-NGDKKAVTLLDESQLDALLD 551 E+ LD YR S I + + I+ N + K +++ GDK V +++ + ++ D Sbjct: 299 AEKIILDINYRSTSNIVDASGYVIRNNKVRFDKNIHTDNEKGDK--VDIIETNNINEEYD 356 Query: 552 KL 553 ++ Sbjct: 357 RI 358 >UniRef50_Q2GE51 Helicase, UvrD/Rep family n=2 Tax=Neorickettsia RepID=Q2GE51_NEOSM Length = 630 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 96/356 (26%), Positives = 154/356 (43%), Gaps = 60/356 (16%) Query: 187 DFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILL 246 D Q LN Q AV +L+LAGAG+GKT LV R L+ G A P QI+ Sbjct: 6 DHLAQSTIMNLNDEQRLAVETVNGPVLILAGAGTGKTKTLVHRIAHLIRSGYAHPNQIMA 65 Query: 247 LAFGRKAAEEMDERIRERLHTEDIT-ARTFHALALHIIQQGSKKV---PIVSKLENDTAA 302 + F KAA EM +R+ E + TFHA A I++ ++K+ P + L+ D Sbjct: 66 VTFANKAANEMIQRVNEIVGEMKFHWIGTFHAAAAKILRIEAEKLGFKPDFTILDVDDQV 125 Query: 303 RHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWV-- 360 R +K EKK +A D+ L ++ S + W Sbjct: 126 RM------LQKVAQEKKIEA----------------------DKALLKKYLSVISAWKDK 157 Query: 361 ----SLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIH 416 S +R + A A + D + K+ LK N++DF L+ Sbjct: 158 AFTPSRVRFNNAANTWFEKQAL-SVYDTYQKK--------------LKENNSMDFGDLLM 202 Query: 417 QAIVILEKG-----RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQA 471 + + K ++ +++I+VDE+QD + + L L +++S + VGDD Q+ Sbjct: 203 HNVTLFNKDAETLEKYKEKFRYIMVDEYQDTNLCQYLWLRLLAQKHS--NICCVGDDDQS 260 Query: 472 IYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 IY + GA++ F ++F + L+ YR ++I A+ I+ N +L K L Sbjct: 261 IYGWRGAEVGNILRFAKDFEGAKVIKLEQNYRSTNKILTAAHNIIKNNQSRLTKKL 316 >UniRef50_Q6MI36 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MI36_BDEBA Length = 762 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 96/348 (27%), Positives = 163/348 (46%), Gaps = 61/348 (17%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNPAQ AV E LL+LAGAGSGKT VL R ++ +G A+ ++IL + F KAA+E Sbjct: 11 LNPAQKDAVETLEGPLLILAGAGSGKTRVLTHRMANMIGQGVAASDEILCVTFTNKAAKE 70 Query: 257 MDERIRERLHTEDITA--------RTFHALALHIIQQGSKKVPIVSKLENDTAARHELFI 308 M+ RI + L D+ A TFH+ + +++Q + T ++ F Sbjct: 71 MEHRIYKIL--SDMGAVVQTQLWISTFHSFCVRVLRQ------------HITLLDYKPFF 116 Query: 309 AEWRKQCSEKKAQAKGWRQWL--TEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMH 366 + S++ +Q K L ++M P NF Q R++S Sbjct: 117 GIY--DSSDQLSQIKKVMTALDINDKM---YPAKNF------QSRISS------------ 153 Query: 367 GGAQAEMIASAPEEIRDLFSKRI--KLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK 424 A+M+ +PE + SKR+ + + KA++ +K N++DF L+ + + Sbjct: 154 ----AKMMGLSPEGLEKS-SKRLMDQKTVEVYKAYEREMKKANSLDFDDLLLKTYDLFRM 208 Query: 425 -----GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQ 479 + +++I+VDE+QD + + L+ L ++ L VGD+ Q+IY + GA Sbjct: 209 YPDVLQMYQKKFRYIMVDEYQDTNHIQYLLVQML--ASAHRNLCVVGDEDQSIYSWRGAD 266 Query: 480 MSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 + F ++F + + L+ YR ++ I A I+ N + K L Sbjct: 267 IKNILDFEKDFRDAKVIKLEENYRSSANIVNGATAVIKNNSQRKDKTL 314 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 23/100 (23%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAA-ARESIMEEALLPPVEDFPDAEERRLMY 647 + MT+H SKG + YV +VGL+E + FP+A + ES E+ + EERRL Y Sbjct: 559 VTMMTLHISKGLEYPYVFVVGLEE--NLFPSARSAESDNEQDV---------EEERRLAY 607 Query: 648 VALTRARHRVWALFNK----------ENPSPFV-EILKNL 676 V +TRAR ++W + K PS F+ EI +NL Sbjct: 608 VGMTRARQKLWLTYAKMRRVWGQEQFNPPSRFIKEIPQNL 647 >UniRef50_P03018 DNA helicase II n=409 Tax=cellular organisms RepID=UVRD_ECOLI Length = 720 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 97/340 (28%), Positives = 149/340 (43%), Gaps = 50/340 (14%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV +LLVLAGAGSGKT VLV R WL++ SP I+ + F KAA E Sbjct: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 Query: 257 MDERIRERLHTED--ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M RI + + T + TFH LA +++ ++ + ++ +E + + Sbjct: 70 MRHRIGQLMGTSQGGMWVGTFHGLAHRLLR--------AHHMDANLPQDFQILDSEDQLR 121 Query: 315 CSEK--KAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 ++ KA +QW + W + N DE L+ Sbjct: 122 LLKRLIKAMNLDEKQWPPRQAMWYI---NSQKDEGLR----------------------- 155 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVI-LEKGRFISPW 431 P I+ + + + +A++ A VDF+ L+ +A + L K + + Sbjct: 156 -----PHHIQSYGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHY 210 Query: 432 K----HILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + +ILVDEFQD + + A + L + + VGDD Q+IY + GAQ+ F Sbjct: 211 RERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMI--VGDDDQSIYGWRGAQVENIQRFL 268 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 +F E L+ YR S I AN I+ N G+L K L Sbjct: 269 NDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKL 308 >UniRef50_D1CD72 UvrD/REP helicase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CD72_THET1 Length = 779 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 107/409 (26%), Positives = 182/409 (44%), Gaps = 69/409 (16%) Query: 182 LTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASP 241 ++ Y D + + LN Q AV + +LVLAG GSGKT VL R +LL++G SP Sbjct: 1 MSNYPDIYSSILEG-LNDKQLEAVTAPDGPVLVLAGPGSGKTRVLTHRIAFLLSQG-VSP 58 Query: 242 EQILLLAFGRKAAEEMDERIRERL--------HTEDITARTFHALALHIIQQGSKKVPIV 293 IL + F KAA EM ERI ERL +IT TFH++ ++++ + I Sbjct: 59 FNILAVTFTNKAAREMRERI-ERLVGGAFGSYEARNITMGTFHSICSRVLRRDGGAIGIS 117 Query: 294 SKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTE----EMQWSVPEGNFWDDEKLQ 349 F+ + Q + +Q L E E Q++ Sbjct: 118 PN-----------FV------IYDDDDQIRLIKQALNEIGLDEKQYA------------P 148 Query: 350 RRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAV 409 R + +R+ S + ++ ++S +EI A + + ++ L+ AV Sbjct: 149 RSIQARISSAKSALLDPEDYSSQGVSSYFDEI----------AARVYRRYQQLLEINQAV 198 Query: 410 DFSGLIHQAIV-------ILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTL 462 DF L+ + ++ IL++ R W+++LVDE+QD + + L+ L +++ + Sbjct: 199 DFDDLLMKVVLLWKSYPDILQQYR--DRWQYVLVDEYQDTNRAQYMLINLLTQEHR--NI 254 Query: 463 FAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQ 522 F VGD+ Q IY + A + F ++ E + L+ YR I +VA+ I N + Sbjct: 255 FVVGDEDQGIYSWRAADIRNILNFERDYPEAKVILLEQNYRSYQEILDVASHIISSN--R 312 Query: 523 LKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHH 571 L++P TN A+ + E+ + D+ S A+ R+ L Y + Sbjct: 313 LRRPKKLWTNKSGGALVRVREAYDEQ--DEASYIAREISRLTSLGEYTY 359 >UniRef50_B9AD93 Putative uncharacterized protein n=2 Tax=Methanobrevibacter smithii RepID=B9AD93_METSM Length = 994 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 97/369 (26%), Positives = 164/369 (44%), Gaps = 49/369 (13%) Query: 197 LNPAQARAV-VNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN Q + V NG LLV AG GSGKT V++ R +L+ + +P +L++ F RKAA Sbjct: 2 LNEDQQKVVEYNGNKPLLVEAGPGSGKTRVIIERVKFLINELKVNPSSLLVITFTRKAAN 61 Query: 256 EMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 E+ +R+ E + +++ T H+ L ++ K+ + + +++D+ + LFI +++ Sbjct: 62 ELKDRLSEDIPKNIIDEMQISTIHSFCLDFLK---KRGNVTNLIDDDSGEKRRLFIQKYK 118 Query: 313 KQCSEKKAQAKGWRQ--WLTEEMQWSVPEG-NFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 + G++ +L + + +P N +D+ + L ++ R Sbjct: 119 YKL--------GFKNEFYLAD---YQIPSVINKFDEYTTFKVDIDGLIDYIKQTRPIDKE 167 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGA---------------LKAENAVDFSGL 414 + + S + SK+++ K+W A L NAVD++ + Sbjct: 168 YVDFVNS----FKFFPSKKVRENEKFKKSWYNARFLQTPKAYVKYLELLDLFNAVDYNTV 223 Query: 415 IHQAIVILE--KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAI 472 I LE K + + +ILVDEFQD P +A + L K T AVGD Q+I Sbjct: 224 ---QIKFLESLKENPETQYTNILVDEFQDTDPVQAEIFEILLKNAESFT--AVGDVDQSI 278 Query: 473 YRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQ-QNPGQLKKPLNSLT 531 Y F G+ F+ + E L+ YR + I + FI+ Q KK L Sbjct: 279 YSFRGSFRDYFEEFYNKYN-AELISLNYNYRSTNNIIRTSEAFIKPQRKEYSKKYLVGAR 337 Query: 532 NGDKKAVTL 540 N DK + L Sbjct: 338 NEDKASYIL 346 >UniRef50_P44804 ATP-dependent DNA helicase rep n=275 Tax=Proteobacteria RepID=REP_HAEIN Length = 670 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 97/351 (27%), Positives = 153/351 (43%), Gaps = 48/351 (13%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q +AV LVLAGAGSGKT V++ + L+ + SP+QI + F KAA E Sbjct: 3 LNPQQQQAVEYVTGPCLVLAGAGSGKTRVIINKIAHLIEKCGYSPKQIAAVTFTNKAARE 62 Query: 257 MDERIRERLHTED---ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 M ER+ + E + TFH L I+++ K + S + H+ F Sbjct: 63 MKERVAHSIGKEQSKGLLVSTFHTLGFDILKREYKALGFKSNMT--LFDEHDQFA----- 115 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 L +E+ V +D+ L R L S + W + + QA Sbjct: 116 ---------------LLKELTADV----LKEDKDLLRELISVISNWKN--DLISPKQAFA 154 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFI-SPW- 431 +A RD + + A + + ++ NA+DF LI ++ ++ + S W Sbjct: 155 LA------RD---AKYQTFAKCYERYATQIRTYNALDFDDLIMLPTLLFKQNEEVRSKWQ 205 Query: 432 ---KHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 +++LVDE+QD + + L+ L + T+ VGDD Q+IY + GA+ + Sbjct: 206 AKIRYLLVDEYQDTNTSQYELIKLLVGDRACFTV--VGDDDQSIYSWRGARPENMVRLRD 263 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQL-KKPLNSLTNGDKKAV 538 +F L+ YR RI AN I N KK +++ G+K V Sbjct: 264 DFPRLNVIKLEQNYRSTQRILHCANILIDNNEHVFDKKLFSTIGKGEKLLV 314 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 23/101 (22%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 Q+ MT+HASKG + YV ++G++EG + E +E EERRL Y Sbjct: 552 QVQLMTLHASKGLEFPYVYLIGMEEGILPHQTSIDEDNVE-------------EERRLAY 598 Query: 648 VALTRAR----------HRVWALFNKENPSPFVEILKNLDV 678 V +TRA+ R + + PS F+ L N DV Sbjct: 599 VGITRAQKELTFSLCRERRQYGELVRPEPSRFLAELPNDDV 639 >UniRef50_D2MPE9 Putative ATP-dependent helicase PcrA n=1 Tax=Bulleidia extructa W1219 RepID=D2MPE9_9FIRM Length = 710 Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 96/345 (27%), Positives = 152/345 (44%), Gaps = 56/345 (16%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNP Q AV++ L V+AGAGSGKT VL R +L+ + P +IL + F KAA Sbjct: 6 SLNPQQKEAVLDEHQYLRVIAGAGSGKTRVLTMRIAYLMEEKKVWPSKILAITFTNKAAR 65 Query: 256 EMDERIRERLHTEDI---TARTFHALALHIIQQ-----GSKKVPIVSKLENDTAARHELF 307 EM+ R+ L E++ T T H+L + I++Q G K + +E+ A Sbjct: 66 EMETRVLS-LMKEEVSKPTVCTIHSLCVRILRQEIEAMGYPKSFTILDVEDQKA-----I 119 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 + E+ K+ S K + AS L ++S + Sbjct: 120 LKEYYKEHSVDKNEIS----------------------------FASALS-YISNNKTEN 150 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRF 427 + E A+ + L K++K+ L K A+DF LI + + ++ Sbjct: 151 VSVEE--ANKIADFSSLEKKKVKIYEYYLHRQKELF----ALDFDDLILWTVRLFDRFEV 204 Query: 428 I-SPWK----HILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + W+ +ILVDEFQDI + L+ L +++ +L VGD Q IY + GA + + Sbjct: 205 VLQKWQQHFHYILVDEFQDIDRIQYQLIKQLTGKDN--SLLVVGDPDQTIYTWRGADVRI 262 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 F ++F + L YR S I + AN I+ N ++ K L Sbjct: 263 IVNFEKDFSNTKTILLTQNYRSTSSILKGANSVIKNNKQRVDKEL 307 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 20/99 (20%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + MT+HASKG + D V + L EG FP+ E ++E VE EERRL YV Sbjct: 544 VQLMTVHASKGLEFDTVFVSDLNEGI--FPS---ERSLQEG-YHGVE-----EERRLAYV 592 Query: 649 ALTRARHRVW---------ALFNKENPSPFVEILKNLDV 678 A TRAR ++ L + PS F++ +++L + Sbjct: 593 AFTRARKHLYLTDAGGYSFMLQRVKTPSRFIDEIEDLYI 631 >UniRef50_A3TGM1 Putative DNA helicase n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TGM1_9MICO Length = 1103 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 101/360 (28%), Positives = 164/360 (45%), Gaps = 55/360 (15%) Query: 198 NPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEM 257 P Q + LLV+AGAGSGKT + AR WL+A G PE +L L F RKAA E+ Sbjct: 30 TPEQTAVIEAPLRPLLVIAGAGSGKTETMAARVVWLVANGFVEPEDVLGLTFTRKAATEL 89 Query: 258 DERIRERLH-------------------TEDITARTFHALALHIIQQGSKKVPIV--SKL 296 +RI RL ++ T+H+ A ++++ ++ ++L Sbjct: 90 SDRIGNRLAQLRRVGLWTPQEVDGAPSLGAAVSVSTYHSYAGRLVREHGLRLGYEADTRL 149 Query: 297 ENDTAA---------RHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEK 347 ++ AA R++ + E K S A + E +Q PE Sbjct: 150 LSEAAAWQTAHEAVVRYDGPMDEVDKAESTVTAAVVDLAGEMAEHLQ--TPES------- 200 Query: 348 LQRRLASRLDRWVS-LMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAE 406 +A+ LDR + L ++ G + + E+ +L +R L P++ + ++ Sbjct: 201 ----VAAHLDRVIEHLEQLERGDTKKRVNPVAGELTNLRLRRAVL--PIVGRYAELKRSR 254 Query: 407 NAVDFS---GLIHQAIVILEKGRFISPWKH--ILVDEFQDISPQRAALLAALRKQNSQTT 461 +A+DF+ L Q + + I +H +L+DEFQD S + ALL AL +T+ Sbjct: 255 DAMDFADQMALAAQLAMTFDDIGAIERARHRVVLLDEFQDTSEAQLALLKALYVAPGETS 314 Query: 462 -LFAVGDDWQAIYRFSGAQMSLTTAFHENFGE---GERCDLDTTYRFNSRIGEVANRFIQ 517 + AVGD Q+IY + GA + T F FG+ ++ DL T++R +S + VAN Q Sbjct: 315 AVTAVGDPHQSIYGWRGASATTLTRFAVEFGDPDPAQKLDLSTSWRNDSAVLAVANHLAQ 374 >UniRef50_A5UJ85 DNA helicase II n=1 Tax=Methanobrevibacter smithii ATCC 35061 RepID=A5UJ85_METS3 Length = 1505 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 93/345 (26%), Positives = 155/345 (44%), Gaps = 39/345 (11%) Query: 197 LNPAQARAVV-NGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN Q AV+ +G+ LL+ AG GSGKT+VL+ R +LL PE +L++ F +KAA Sbjct: 457 LNEDQEAAVMYDGKKPLLIEAGPGSGKTTVLIERVKYLLNNKGIDPESLLVITFTKKAAN 516 Query: 256 EMDERIRE------RLHTEDITARTFHALALHIIQQ-GSKKVPIVSKLENDTAARHELFI 308 E+ R+ E L + + T H I+++ G + I+ +D + +F+ Sbjct: 517 ELKTRLSEETDNISELDVQKMQISTIHGFCAKILEKAGYVNLSIIG---DDLGEKINMFV 573 Query: 309 AEWRKQCSE---------KKAQAKGWRQWLTEEMQWSVPEGNFW----DDEKLQRRLASR 355 RK E K AK E + V N D+ + + Sbjct: 574 ---RKHLEELGFTGIAYASKRDAKNIINKYEEYCTFGVDSQNLIKYIQDNYPISQDYIDF 630 Query: 356 LDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKL-MAPLLKAWKGALKAENAVDFSGL 414 ++++ M + G +M +E + + + L +A +K ++ EN +DF + Sbjct: 631 VEQY---MEENEGKFPKMEVKENKEFKQSYYNALYLQVAKSYPIYKELMEKENVIDFGHM 687 Query: 415 IHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYR 474 +A+ L + S +K+IL+DEFQD P + + L K T VGD Q+IY Sbjct: 688 QLKALEYLRENP-DSVFKNILIDEFQDTDPIQMEIFKILMKNCDSATF--VGDIDQSIYG 744 Query: 475 FSGAQMSLTTAFHE--NFGEGERCDLDTTYRFNSRIGEVANRFIQ 517 F G S F + N + +R L+T YR ++I +V+ I+ Sbjct: 745 FRG---SYDNYFEQLSNEYDVKRISLNTNYRSTNQIIDVSEALIK 786 >UniRef50_C0R0K3 ATP-dependent DNA helicase n=2 Tax=Brachyspira RepID=C0R0K3_BRAHW Length = 665 Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 91/331 (27%), Positives = 147/331 (44%), Gaps = 50/331 (15%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q +AV + + LL LAGAGSGKT V+ R +L+ G P QIL + F KAA E Sbjct: 5 LNEEQRQAVEHIDGPLLALAGAGSGKTRVITERIAYLIKHG-VLPSQILAVTFTNKAAAE 63 Query: 257 MDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M ERI + L + + TFH+ + +++ +K+ + +++ I R Sbjct: 64 MRERITKLLKEKPKQLVVSTFHSFCVRVLKGDIEKLGYKNNFSIYSSSDSRTLI---RNI 120 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWV-SLMRMHGGAQAEM 373 E K + DE L A +DR+ +LM+ + Sbjct: 121 LREIKINTLNY-------------------DENL---FAWYIDRFKNNLMKPY------- 151 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRFI 428 P + + +KR+ + ++ LK NAVDF+ LI+ I + + ++ Sbjct: 152 -EVEPHDDLEKIAKRV------YEVYQSYLKGYNAVDFNDLINLTIDLYVEFPEVLNKYQ 204 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 +++I+VDE+QD + + L L + + VGDD Q+IY F GA +S +F Sbjct: 205 ERFRYIMVDEYQDTNFAQYKLTTLLASKYRNIAV--VGDDDQSIYAFRGADVSNILSFEN 262 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQN 519 + + + L YR I E A+ I N Sbjct: 263 EYPDAKIVTLTKNYRSTKAILEAAHSVISNN 293 >UniRef50_Q1J014 UvrD/REP helicase n=4 Tax=Deinococci RepID=Q1J014_DEIGD Length = 741 Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 95/339 (28%), Positives = 151/339 (44%), Gaps = 44/339 (12%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP QA+A + LV+AGAGSGKT LV R L+ P +IL + F KAA E Sbjct: 13 LNPNQAQAANHYTGPALVIAGAGSGKTRTLVYRIAHLIGHYGVDPGEILAVTFTNKAAAE 72 Query: 257 MDERIRERLHTED-ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQC 315 M ER R + D + TFH+ + I++ + + + + I + Q Sbjct: 73 MRERARHLVEGADRLWMSTFHSAGVRILRAYGEHIGL----------KRGFVIYDDDDQL 122 Query: 316 SEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIA 375 + +E+ S+P E R L LDR S + +A Sbjct: 123 D------------ILKEIMGSIPG---IGAETHPRVLRGILDRAKSNLLTPAD-----LA 162 Query: 376 SAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRFISP 430 PE + + A + ++ K +NA+DF LI + + + ++ R Sbjct: 163 RHPEPFISGLPREVA--AEAYRRYEARKKGQNAIDFGDLITETVRLFQEVPAVLERVQDR 220 Query: 431 WKHILVDEFQDISPQRAAL--LAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 + I VDE+QD + + L L A R +N L VGD Q+IYRF GA + F + Sbjct: 221 ARFIHVDEYQDTNKAQYELTRLLASRDRN----LLVVGDPDQSIYRFRGADIQNILDFQK 276 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 ++ + + L+ YR ++R+ +AN+ I+ N +L+K L Sbjct: 277 DYLDAKVYMLEQNYRSSARVLTIANKLIENNAERLEKTL 315 >UniRef50_Q67RU7 ATP-dependent DNA helicase n=1 Tax=Symbiobacterium thermophilum RepID=Q67RU7_SYMTH Length = 672 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 101/343 (29%), Positives = 148/343 (43%), Gaps = 65/343 (18%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 L P QARAV + L+V+AG GSGKT+V+ R G+L+A P +L++ F + AA+E Sbjct: 61 LTPEQARAVTHAAGPLMVVAGPGSGKTTVIARRIGYLIAVRGVDPRSLLVITFTKAAADE 120 Query: 257 MDERIRERLHTEDITA--RTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 + R A TFH LA ++ RH Sbjct: 121 LKARAAGTAGPAAARAFFGTFHGLAYRML-------------------RH---------- 151 Query: 315 CSEKKAQAKGWRQWLTEEMQWSV------PEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 AQ G + L E+ Q+ + G DDE +Q LA L R+ Sbjct: 152 -----AQGGGPLRILLEDQQFQLIRNLMRTMGLNTDDEAVQEVLAD-------LSRL--- 196 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-- 426 +AE A R L LL+ + A + +DF L+H+A+ +L +GR Sbjct: 197 -RAEPEPPAGFRPRSLPPAEFD---GLLRRYAEAKAEQGLLDFDDLLHEALALL-RGRPE 251 Query: 427 ----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + + HILVDEFQD +P + AL+ L + L VGDD QAIY + GA Sbjct: 252 LLEGYRRRFGHILVDEFQDTNPVQFALVRLLAEPGRN--LCVVGDDDQAIYGWRGATPEF 309 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKK 525 +F + + + L +R + + E ANR + N +L K Sbjct: 310 LLSFGDLYPGAAQVTLAVNHRCPAPVVEAANRLVAHNVRRLGK 352 Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 24/131 (18%) Query: 547 DALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ-IDFMTIHASKGQQADYV 605 D LL L+ + R+L+ A H+ S +A + P+ Q + +T H +KG + V Sbjct: 541 DELLGLLAEVQRTAPRLLLPAYLGHVAAFS-AQADRKAPEGQAVTLVTCHRAKGLEFPRV 599 Query: 606 IIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKE- 664 ++ G A + ++ P +E EERRLMYVA+TRAR +W + Sbjct: 600 VVAG-----------AVDRLLPHRSNPDIE-----EERRLMYVAVTRAREELWISAPRSY 643 Query: 665 -----NPSPFV 670 PSPFV Sbjct: 644 EGRECRPSPFV 654 >UniRef50_C6JLW6 UvrD/REP helicase n=2 Tax=Fusobacterium RepID=C6JLW6_FUSVA Length = 617 Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 92/334 (27%), Positives = 151/334 (45%), Gaps = 63/334 (18%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPE-QILLLAFGRKAAE 255 LN Q RA+ + E LV+AGAGSGKT +V R +++ RG PE +IL+L F +KAA Sbjct: 33 LNEEQLRALTSLEGQYLVIAGAGSGKTRTIVYRTAFMIERG--IPEKKILMLTFTKKAAL 90 Query: 256 EMDERIRERLHTEDI--TARTFHALALHIIQQ-----GSKKVPIVSKLENDTAARHELFI 308 EM+ERI+ ++I + TFH+L ++ + G +K I+ EN++ A L I Sbjct: 91 EMEERIKNLTSEKEIKVSVSTFHSLCAELLIKYKNIFGIEKFSIID--ENESNAVISLLI 148 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 E+ + K +L+E+ ++ + G Sbjct: 149 REY-------SLKNKNNGSFLSEK----------------------------RVVEIFGA 173 Query: 369 AQAEMIASAPEEIRDLFSKRIKL----MAPLLKAWKGALKAENAVDFSGLIHQAIVILEK 424 A+ S + I + S + K+ + L +K K DF L + + L+ Sbjct: 174 AR-----SREKNIIEFLSDKEKIYLRDLEFLEMKYKRFKKEFQIFDFEDLTEKVLKKLKS 228 Query: 425 GR-FIS----PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQ 479 + F+ +K+I+VDE+QD + + L L + + AVGDD+Q+IY F GA Sbjct: 229 DKNFLKMLREKYKYIVVDEYQDTNSVQRKFLKTL--VGIEGNIMAVGDDYQSIYGFRGAD 286 Query: 480 MSLTTAFHENFGEGERCDLDTTYRFNSRIGEVAN 513 F ++F + L+ YR + I + N Sbjct: 287 FKNILRFGKDFPNSKMIKLERNYRSSDEIIKYIN 320 >UniRef50_Q0ACW3 UvrD/REP helicase n=9 Tax=Bacteria RepID=Q0ACW3_NITEC Length = 971 Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 85/340 (25%), Positives = 150/340 (44%), Gaps = 45/340 (13%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 S NP Q A++ + +L++AG GSGKT LV R +L+ + +PE + ++ F KAA Sbjct: 10 SKANPQQLEAILATDGPVLIIAGPGSGKTFTLVERIAYLITQEGVAPESLFVVTFTDKAA 69 Query: 255 EEMDERIRERL-------HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 E+ RI RL + ++ TFH++ L +++ + + + F Sbjct: 70 RELTTRISNRLTNLGIKFNLNEMYLGTFHSICLRLLEDFREFTWLKRSFTLFDQFDQQYF 129 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNF--WDDEKLQRRLASRLDRWVSLMRM 365 + + K E +P+ DD+ + + L +WV+ +R Sbjct: 130 LYQHIKDFRE-------------------LPDAQLVMGDDQTGRWMQSENLLKWVNKVR- 169 Query: 366 HGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK- 424 A + +APE I +A ++ L N++DFSG+ ++A+ +LEK Sbjct: 170 EEALDATTLTAAPE-------LEICALATCFAKYQELLHEHNSLDFSGIQYEALRLLEKR 222 Query: 425 ----GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQM 480 + H++VDE+QD + + +L L +N L VGDD Q +YRF GA + Sbjct: 223 PEVLAQLRERLTHLMVDEYQDTNTIQERILLLLAGENK--NLCVVGDDDQGLYRFRGATI 280 Query: 481 SLTTAFHENFGEGE--RCDLDTTYRFNSRIGEVANRFIQQ 518 F F + + + L YR + I N ++++ Sbjct: 281 RNILEFPSLFTDDQCKQVKLTVNYRSHPDIIRFYNEWMKE 320 >UniRef50_B3EU74 UvrD/REP helicase n=4 Tax=Bacteroidetes RepID=B3EU74_AMOA5 Length = 757 Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 98/363 (26%), Positives = 165/363 (45%), Gaps = 49/363 (13%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q +A VN E +++AGAG+GKT VL R +L+ + P +IL L F KAA E Sbjct: 8 LNEQQRQAAVNTEGPCMIIAGAGAGKTKVLTTRIAYLIQEKKVDPFKILALTFTNKAANE 67 Query: 257 MDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLE-NDTAARHELFIAEWRK 313 M +RI + + +++ TFH+ +++ + K+ S DT Sbjct: 68 MKKRIEQVIGPAAKNVWLGTFHSCFAKLLRIEADKIGYPSSFSIYDT------------- 114 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 +K + + +EM + + + R++S +R ++ AQ E Sbjct: 115 ------TDSKSLLKSIIKEMNL---DDKTYTPNTVLSRISSAKNRLIT-------AQ-EY 157 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RFI 428 I + + D + + K+ ++ K L+A A+DF ++ ++L + ++ Sbjct: 158 INNPIYQQDDEEAMKPKVGEIYVQYAKRCLQA-GAMDFDDILLNTYLLLNQHLDILYKYQ 216 Query: 429 SPWKHILVDEFQDISPQRAAL---LAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 +++IL+DEFQD + + A+ LA + K + VGDD Q+IY F GA + Sbjct: 217 ERFQYILIDEFQDTNLAQYAIVKDLAGIHK-----NICVVGDDAQSIYAFRGANIRNILN 271 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQ 545 F +++ L+ YR I E AN I+ N QLKK N T +K V L + Sbjct: 272 FEKDYPNLTIIKLEQNYRSTQNIVEAANGIIRNNQLQLKK--NVWTANEKGEVIGLIRAT 329 Query: 546 LDA 548 DA Sbjct: 330 TDA 332 Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 12/71 (16%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 +I MTIHA+KG + YV IVG++E D FP++ +L ED EERRL Y Sbjct: 556 KISLMTIHAAKGLEFKYVYIVGIEE--DLFPSS--------MMLGSREDLE--EERRLFY 603 Query: 648 VALTRARHRVW 658 VALTRA+ +V+ Sbjct: 604 VALTRAQKKVF 614 >UniRef50_B6K032 ATP-dependent DNA helicase srs2 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K032_SCHJY Length = 819 Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 97/347 (27%), Positives = 147/347 (42%), Gaps = 45/347 (12%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q ++ + +LAG GSGKT VL AR LL + P I++ F KAA E Sbjct: 10 LNPQQKQSAESPHKYTQILAGPGSGKTRVLAARVVHLLNVEQFHPNDIVIATFTNKAANE 69 Query: 257 MDERIRERL---HTEDITARTFHALALHIIQQGSKKV------PIVSKLENDTAARHELF 307 + +RI + + H + + TFH++A H + + KKV ++ + E + Sbjct: 70 IKQRIGKLVKDNHANSLVSGTFHSIAFHYLLRHGKKVGLPKNWTVIDRTEATNIMKQ--L 127 Query: 308 IAEWRKQCSEKKAQAKGWR-QWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMH 366 + RK K A G R Q LT + S VS M+ Sbjct: 128 LERLRK---AKNPTADGIRGQELTPNVALS----------------------RVSRMKSS 162 Query: 367 G---GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE 423 G E ++ P + + + L K ++ L+ VDF L+ I ++ Sbjct: 163 GLIAKPHCEQLSCLPGLTVN--TNQSFQSTELYKLYQAVLRKNGYVDFDDLLILFIQLVH 220 Query: 424 KGRF-ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + I KHILVDEFQD S + L+ L + S T+ VGD Q+IY F A++ Sbjct: 221 DHTYCIDNIKHILVDEFQDTSKIQYLLIKLLARDTSGITI--VGDPDQSIYGFRSAELGN 278 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS 529 +F + L+T YR I E A I Q+ + +K L + Sbjct: 279 LVMMTTDFPDTRVFHLETNYRSADSILETAMAIINQDKARPQKTLRT 325 >UniRef50_C3QGR5 ATP-dependent DNA helicase n=23 Tax=Bacteroidales RepID=C3QGR5_9BACE Length = 792 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 94/348 (27%), Positives = 157/348 (45%), Gaps = 53/348 (15%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEA-SPEQILLLAFGRKAAE 255 LN +Q AV + LV+AGAGSGKT VL + +LL + +P IL L F KAA Sbjct: 9 LNESQCAAVTYNDGPSLVIAGAGSGKTRVLTYKIAYLLEQENGYNPWNILALTFTNKAAR 68 Query: 256 EMDERIRERLHTEDITAR-----TFHALALHIIQQGSKKVPIVSKLE-NDTAARHELFIA 309 EM ERI ++ E AR TFH++ I++ ++ + S+ DTA L + Sbjct: 69 EMKERIARQVGME--RARYLWMGTFHSIFSRILRAEAQYIGFTSQFTIYDTADSKSLLRS 126 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 ++ ++K G +Q R+++ + V+ Sbjct: 127 IIKEMGLDEKTYKPGV----------------------VQARISNAKNHLVTPTGYAANK 164 Query: 370 QA---EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-- 424 +A +M A P IRD+++ + W +A A+DF L+ ++ Sbjct: 165 EAYEGDMAAKMP-AIRDIYT----------RYWDRCRQA-GAMDFDDLLVYTYILFRDFP 212 Query: 425 ---GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMS 481 R+ + ++LVDE+QD + + +++ L K+N + + VGDD Q+IY F GA + Sbjct: 213 DVLTRYQDQFHYVLVDEYQDTNYAQHSIILQLTKENQRICV--VGDDAQSIYSFRGADID 270 Query: 482 LTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS 529 F + + + L+ YR I AN I++N Q++K + S Sbjct: 271 NILYFTKIYPNTKVFKLEQNYRSTQTIVCAANSLIEKNERQIRKAVFS 318 Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 29/109 (26%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDA--EERRL 645 ++ MT+H++KG + V +VGL+E + FP+ V D P A EERRL Sbjct: 566 KVTLMTVHSAKGLEFKNVFVVGLEE--NLFPSGM------------VGDSPRALEEERRL 611 Query: 646 MYVALTRARHRVWALFNKE----------NPSPFVEILKNLDVPVARKP 684 YVA+TRA + F K +PS F L+++DV R P Sbjct: 612 FYVAITRAEEHCYLSFAKTRFRYGKMEFGSPSRF---LRDIDVDYLRLP 657 >UniRef50_A0M3U3 PcrA-like UvrD/Rep family ATP-dependent DNA helicase n=28 Tax=Bacteroidetes RepID=A0M3U3_GRAFK Length = 787 Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 92/338 (27%), Positives = 160/338 (47%), Gaps = 43/338 (12%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN AQ V+ + ++V+AGAGSGKT VL R +L+ +G IL L F KAA E Sbjct: 22 LNDAQRAPVLQKDGPMIVIAGAGSGKTRVLTYRIAYLMNQG-VDAFNILSLTFTNKAARE 80 Query: 257 MDERIRERLHT---EDITARTFHALALHIIQQGSKKVPIVSKLE-NDTAARHELFIAEWR 312 M +RI + + + +++ TFH++ I++ + K+ S DT H + A Sbjct: 81 MKQRISKIVGSSEAKNLWMGTFHSVFAKILRFEADKMGYPSNFTIYDTQDSHSVIRA--- 137 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 + +EM+ + + + +++ R++S + SL+ + Q Sbjct: 138 ----------------IIKEMRL---DKDVYKYKQVYNRISSYKN---SLITVKAYFQNP 175 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRF 427 + A D SK+ +L + KA+ A+DF L+ + +L + ++ Sbjct: 176 ELQEA-----DAMSKKPRL-GEIYKAYVDRCFKAGAMDFDDLLLKTNELLNRFPEVLHKY 229 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 S +K+ILVDE+QD + + ++ AL + + VGDD Q+IY F GA ++ F Sbjct: 230 QSRFKYILVDEYQDTNHSQYLIVRAL--SDKFQNICVVGDDAQSIYAFRGANINNILNFQ 287 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKK 525 +++ + L+ YR + I E AN I +N +L K Sbjct: 288 KDYDNVQMYRLEQNYRSSKNIVEAANSIIDKNQTKLDK 325 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 24/95 (25%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 ++ MTIH +KG + YV IVG++E D FP+ + E EERRL Y Sbjct: 576 RVALMTIHLAKGLEFPYVYIVGMEE--DLFPSGMSMNTRSEL----------EEERRLFY 623 Query: 648 VALTRA-----------RHRVWALFNKENPSPFVE 671 VA+TRA R+R W PS F+E Sbjct: 624 VAITRAEKQAYLTYTLSRYR-WGKLVDAEPSRFIE 657 >UniRef50_Q9CD72 ATP-dependent DNA helicase pcrA n=26 Tax=Actinomycetales RepID=PCRA_MYCLE Length = 778 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 91/348 (26%), Positives = 158/348 (45%), Gaps = 50/348 (14%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q +AVV+ LL++AGAGSGKT+VL R +L+A QIL + F KAA E Sbjct: 21 LNPQQRQAVVHEGSPLLIVAGAGSGKTTVLARRIAYLIAARSVGVSQILAITFTNKAAAE 80 Query: 257 MDERIRERL--HT-EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 M ER+ + HT + TFH+ + I++ + ++ L ++ ++ + Sbjct: 81 MRERVARLVGDHTGPSMWVSTFHSTCVRILRN---QASLIGGLNSN----FSIYDVD--- 130 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRL-DRWVSLMRMHGGAQAE 372 ++ Q + ++M + +R + RL +S ++ Sbjct: 131 -------DSRSLLQMIGQDMGLDI------------KRYSPRLMANAISNLKNELIDAES 171 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISP-- 430 +A+ + DL + +A + ++ L+ NA+DF LI + + IL+ I+ Sbjct: 172 AVANLSSDTDDL----ARTVATVYGEYQRRLRTANALDFDDLIGETVGILQAFPQIAEHY 227 Query: 431 ---WKHILVDEFQDISPQRAALLAALRKQNSQTT--------LFAVGDDWQAIYRFSGAQ 479 ++H+LVDE+QD + + L+ L ++ + L VGD Q+IY F G+ Sbjct: 228 RRRFRHVLVDEYQDTNHAQYVLVRELVGHGARNSPDDMPPGELCVVGDADQSIYAFRGST 287 Query: 480 MSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 +S F ++ + L+ YR I AN I +N G+ K L Sbjct: 288 ISNIEDFERDYPDTTTILLEQNYRSTQNILSAANSVIARNFGRRDKRL 335 >UniRef50_D1A297 ATP-dependent DNA helicase PcrA n=3 Tax=Actinomycetales RepID=D1A297_THECD Length = 768 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 100/382 (26%), Positives = 167/382 (43%), Gaps = 55/382 (14%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q AV++ LL++AGAGSGKT VL R +LLA + P QIL + F KAA E Sbjct: 14 LNPQQRAAVLHTGGPLLIVAGAGSGKTRVLTHRIAYLLAERDVHPAQILAITFTNKAAGE 73 Query: 257 MDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M ER++ + + + TFH+ + I+++ ++++ S AA + +A Sbjct: 74 MRERVQALVGPRSGAMWVMTFHSACVRILRREARRLGFPSNFSIYDAADAQRLMA---LV 130 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 C E + + + Q S + D E + R ++ L+ Sbjct: 131 CRELDLDPRRYPPK-SFSAQVSNLKNELIDYEAFKARASTHLE----------------- 172 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRFIS 429 + +A + ++ L+ A+DF LI + +L+ + Sbjct: 173 ---------------QKLAEAYEMYQARLQQAGAMDFDDLIMTTVHLLQAFPEAAEHYRR 217 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTT----LFAVGDDWQAIYRFSGAQMSLTTA 485 ++HILVDE+QD + + L+ L + + L VGD Q+IY F GA + Sbjct: 218 RFRHILVDEYQDTNHAQYELVRLLTESPGEDVGPAELCVVGDADQSIYAFRGATIRNILE 277 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQ 545 F +F + L+ YR I AN I++N + K L S +K V + +++ Sbjct: 278 FERDFPDATTILLEQNYRSTQTILSAANAVIERNAHRKPKRLWSDQGEGEKIVGYVADNE 337 Query: 546 LD------ALLDKLS--GYAKP 559 D A +D+L+ G A+P Sbjct: 338 HDEAAFVAAEVDRLTDAGLARP 359 >UniRef50_Q2RGX9 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria RepID=Q2RGX9_MOOTA Length = 729 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 101/345 (29%), Positives = 152/345 (44%), Gaps = 60/345 (17%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV + LLVLAGAGSGKT VL R L+ G PE IL + F KAA+E Sbjct: 11 LNGPQQEAVKHRGTPLLVLAGAGSGKTRVLTYRVAALIQEG-VRPENILAVTFTNKAAQE 69 Query: 257 MDERIRERLHTE---DITARTFHALALHIIQQ-----GSKKVPIVSKLENDTAARHELFI 308 M ER+ E L E + TFH+ + I+++ G + ++ ++ AA E+ Sbjct: 70 MKERL-EGLVGEAARGLWVSTFHSACVRILRREAHLLGYRPNFVIYDTDDQQAALKEVL- 127 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 +E+ DD+K R SL ++ Sbjct: 128 ----------------------KELDL--------DDKKYPPR---------SLAQVISM 148 Query: 369 AQAEMIASAPEEIRDLFSK-RIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRF 427 A+ ++ PE D + R + + + ++ L+ NA+DF LI Q + + ++ Sbjct: 149 AKNDL--KTPERFLDGAATFREQQQGQIYRRYQEKLRELNAMDFDDLIMQTVFLWQQNPL 206 Query: 428 I-----SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + W+HILVDE+QD + + L+ L + L VGD Q IY + GA + Sbjct: 207 VLRYYQQRWQHILVDEYQDTNHAQYILVRLLAGKGD--NLCVVGDPDQGIYGWRGADIGN 264 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 AF E+F L+ YR I + AN IQ N G+ +K L Sbjct: 265 ILAFEEDFPRARVILLEENYRSTRPILQAANAVIQHNEGRREKRL 309 >UniRef50_C4G2E3 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2E3_ABIDE Length = 618 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 84/334 (25%), Positives = 150/334 (44%), Gaps = 50/334 (14%) Query: 201 QARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDER 260 Q AV + + ++VLAG GSGKT+V+ R +LL + +P+ IL++ F + AA EM ER Sbjct: 7 QLEAVRHVDGPMMVLAGPGSGKTAVITGRVRYLLEEMKIAPQTILVITFTKAAAMEMKER 66 Query: 261 IRERL-HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKK 319 + + + + TFH++ I++ V ++ + R+ F+ E + ++ Sbjct: 67 FVKLMGEPKGVQFATFHSVFFMILRVSYGYG--VDQIITEEMTRN--FLKEKIRSLDLEE 122 Query: 320 AQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPE 379 K + + + E+ EG ++ + SL + PE Sbjct: 123 GDEKDFIKNVIGEISRVKSEG-------------VAIENYYSL-------------NCPE 156 Query: 380 E-IRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFI-----SPWKH 433 E RD+F K+++ +K +DF ++ + I S +K+ Sbjct: 157 EAFRDIF-----------KSYEAFMKERGLIDFDDMMLLCDKLFNDYPHILEAWQSKFKY 205 Query: 434 ILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEG 493 IL+DEFQD+S + L+ + K +F VGDD Q+IYRF GA+ + F + + + Sbjct: 206 ILIDEFQDVSKLQFELVRKMSK--PLNNIFIVGDDDQSIYRFRGAKPEIMLGFEKIYPDC 263 Query: 494 ERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 ++ L+ YR I A I +N + K + Sbjct: 264 KKVLLNENYRSTESILNFAGSVIHKNKQRFDKKI 297 >UniRef50_Q5HY14 DNA helicase II UvrD n=2 Tax=Gluconobacter oxydans RepID=Q5HY14_GLUOX Length = 682 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 108/397 (27%), Positives = 182/397 (45%), Gaps = 44/397 (11%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 S L P+QA A ++VLAGAG+GKT LVA + + SP++IL + F KAA Sbjct: 15 SGLTPSQADAARQ-TGPVVVLAGAGTGKTKTLVAGIVDRVVKRRMSPDRILAVTFTNKAA 73 Query: 255 EEMDERIRERLHTEDIT--ARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM RI L+ TFHA G +++ + + D A F Sbjct: 74 GEMKTRIAAALNIAQAPYWVGTFHA-------HGRRQL----RTDPDIAGLRPGF----- 117 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 + + K R+ L + ++ V + D E ++R+ S R +++++ + + Sbjct: 118 -DVCDSEDSTKIVRRLLEKAIEAGVMNAD--DGETFRKRVKSVSSR-IAMLKENMVLPPD 173 Query: 373 MIASAPEEI-RDLFSKRIKLM-----APLLKAWKGALKAENAVDFSGLIH-QAIVILEKG 425 +A I D ++ +M A L A++ L+ N DF+ L+ + +L Sbjct: 174 AVAWVEGRIATDAITEGDDIMVWRDAAVLYPAYQAMLRESNRADFADLLLWPTVTMLRDE 233 Query: 426 RFISPWKH----ILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMS 481 R+ W +L DEFQD++ + L L K +++ LF VGDD Q+IY + GA + Sbjct: 234 RYRRDWADRFDCVLADEFQDVNRLQFLWLKCLSKDHNE--LFVVGDDAQSIYGWRGANVR 291 Query: 482 LTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL 541 + +F + F G L+ +R I AN I + +L+K L + +GD + V +L Sbjct: 292 IIRSFLKEFPTGRMIALEQNFRSTGHILSAANAVISHDTSRLEKTLYT-ASGDGEPVDIL 350 Query: 542 ------DE-SQLDALLDKLSGYAKPEERILILARYHH 571 DE S + A + + + P E + +L R++H Sbjct: 351 RHTGSQDEASGIAAEIGRRALEGVPYEDMAVLYRFNH 387 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 22/90 (24%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 ++ MTIH SKG + +V ++G E+ L P + AEERRL Y Sbjct: 571 RVKLMTIHGSKGLEFGHVFLIG----------------WEDTLFPSRTNIDPAEERRLAY 614 Query: 648 VALTRARHRV---WALFNK---ENPSPFVE 671 VALTR R RV W F + NPS F++ Sbjct: 615 VALTRGRQRVSVSWCEFRRGEQANPSCFID 644 >UniRef50_C2CV85 Possible ATP-dependent DNA helicase n=2 Tax=Bifidobacteriaceae RepID=C2CV85_GARVA Length = 964 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 103/390 (26%), Positives = 158/390 (40%), Gaps = 63/390 (16%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q++AV +LL+ AGAGSGKT VL R W+LA +A P QIL + F KAA E Sbjct: 104 LNPQQSKAVQYTGPALLIGAGAGSGKTRVLTRRIAWILANRKAWPSQILAITFTNKAAAE 163 Query: 257 MDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKL----ENDTAARHELFIAE 310 M ER+ + + TFH+ + I++ + + S +D ++ +E Sbjct: 164 MRERLASLIGNSANSMWVSTFHSACVKILRAHGDSIGLKSGFSIYDSSDCERLVKIIASE 223 Query: 311 WR---KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 K+ + K +K + + W N+ D K ++ S G Sbjct: 224 LNIDIKKFTPKLLLSK-ISDFKNNLVTWQENLKNYAPDYKPGASVSG-----ASSFNAAG 277 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRF 427 A A L A + ++ L NAVDF LI + +L + Sbjct: 278 NADA-------------------LYAAVYAEYQNRLSVSNAVDFDDLIMLTVKLLRQNPQ 318 Query: 428 ISPW-----KHILVDEFQDISPQRAALLAAL-----------------------RKQNSQ 459 +S + ++ILVDE+QD + + L+ L Q Q Sbjct: 319 VSAYYKRKFRYILVDEYQDTNHAQYVLIRELAGVDDAGVDDYSTDSTVSSVSPDSTQLPQ 378 Query: 460 TTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQN 519 +++ VGD Q+IY F GA + F ++F L+ YR I + AN I N Sbjct: 379 SSITVVGDSDQSIYAFRGADIRNIQDFEQDFPSATTIMLEQNYRSTQTILDAANAVISNN 438 Query: 520 PGQLKKPL-NSLTNGDKKAVTLLDESQLDA 548 + K L SL G + D +Q +A Sbjct: 439 ANRKPKKLWTSLGKGSPIVGYVADNAQGEA 468 >UniRef50_UPI00019730DB UvrD/REP helicase n=1 Tax=Clostridium sp. M62/1 RepID=UPI00019730DB Length = 1133 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 94/353 (26%), Positives = 150/353 (42%), Gaps = 64/353 (18%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q RA S+ V+AG G+GKT L AR LL P +I + F ++AAEE Sbjct: 513 LNPEQRRAAAVPARSMAVIAGPGTGKTGTLTARIRCLLEVRRVRPSEITAVTFTKRAAEE 572 Query: 257 MDERIRERLHTEDITAR----TFHALALHIIQQGSKKVPIVSKLE-----NDTAARHELF 307 + ER++ + +R TFH+L +++Q + + LE +D +L Sbjct: 573 LRERLKREMPRHRTISRIQTGTFHSLCYSMLRQTGVEFELADSLELTELASDVLKEKKLK 632 Query: 308 I--AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRM 365 I AE+ + S +K R+W T + +EK Sbjct: 633 IRPAEFLRGVSAEKC-----RRWETGDAACGK---EACKEEK------------------ 666 Query: 366 HGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG 425 ++ EE +L+ +R L+ DF L +A+ +LE+ Sbjct: 667 ------NLLPEKQEEAFELYQRR--------------LREAGLYDFDDLQIEALRLLEED 706 Query: 426 R-----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQM 480 R S ++++LVDEFQDISP + L+ ++ + LF +GD Q+IY F G+ Sbjct: 707 REAAAGLCSRFRYLLVDEFQDISPIQYRLIRNWNQEGRE--LFVIGDPDQSIYGFRGSDP 764 Query: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNG 533 F E L+ YR + +I E A I NPG ++ +++ G Sbjct: 765 ECFRRLLAEFPETCTVRLEQNYRSSLQITEGACAMISNNPGGERRLISAAGEG 817 >UniRef50_Q029V8 ATP-dependent DNA helicase, Rep family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q029V8_SOLUE Length = 788 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 95/381 (24%), Positives = 166/381 (43%), Gaps = 60/381 (15%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV + + LL+LAGAGSGKT V+ R ++ P +L + F KAA+E Sbjct: 7 LNAQQREAVTHIDGPLLILAGAGSGKTRVITHRIAHIITSRHVPPSAVLAVTFTNKAAKE 66 Query: 257 MDERIRERLHTEDI------TARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 M ER+ L ED+ T TFH+ + ++++ + +++ R ++ E Sbjct: 67 MRERVAALL--EDVPLDSMPTVSTFHSFCVRLLRRDGDPL---ARVRPGFTRRFTIYDDE 121 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 + Q + + G+ + E MQ+ R SR+ + Sbjct: 122 DQLQIIKAAYRTLGFDE--KEFMQY--------------RAALSRI------------SH 153 Query: 371 AEMIASAPEEI-RDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFI- 428 A+ P+E+ RD +K + +A L + ++ AL+ NA+DF L+ +A+ +L Sbjct: 154 AKNTKVTPQEMFRDAVNKESEAVAALYEEYEKALRNANALDFDDLLLEAVRLLRTDDATR 213 Query: 429 SPWK----HILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 W ++++DE+QD + + L+ L +Q+ + VGD+ Q+IY + GA + Sbjct: 214 ESWNRRLSYVMIDEYQDTNRSQYELMRLLTEQHQNVCV--VGDEDQSIYSWRGADIKNIL 271 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDES 544 F +++ + L+ YR I A ++ N +K L ES Sbjct: 272 DFEKDYPRAKTIRLEQNYRSTKNILAAAGAVVENNKA-------------RKGKKLWTES 318 Query: 545 QLDALLDKLSGYAKPEERILI 565 LL +GY E + I Sbjct: 319 DSGELLGLYAGYDSENEALFI 339 >UniRef50_C4DDU0 DNA/RNA helicase, superfamily I n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DDU0_9ACTO Length = 1041 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 95/343 (27%), Positives = 151/343 (44%), Gaps = 39/343 (11%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 P QA A+ L++AGAGSGKT + +R WL+A G A PEQIL L F RKAA Sbjct: 20 PPTEQQATAIEAPLRPQLIVAGAGSGKTGTMASRVVWLIANGYARPEQILGLTFTRKAAA 79 Query: 256 EMDERIRERLH-----------TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARH 304 E+ RIRERL + + T T+H+ A I+ + ++ + A Sbjct: 80 ELASRIRERLARLSGLDGVGQLSGEPTVSTYHSYASGIVSEHGPRIGLEPGTVLSPAQTW 139 Query: 305 ELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMR 364 +L A R + A + + + S D+ R L+++ + Sbjct: 140 QLAYAAVRGHDGDMSAVSLTVETVVKRVLSLS-------DELSEHLREPEELEQFTQELA 192 Query: 365 MHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQA------ 418 G + ++ R++L+ P++ ++ +AE AVDF+ +H A Sbjct: 193 NEIGERVGKGTQKTAQLLMALQSRLQLL-PIVADYRRRKRAEGAVDFADQLHYAASAAAA 251 Query: 419 ---IVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRF 475 + +E+ RF +L+DE+QD S + LL +L T AVGD Q+IY + Sbjct: 252 APEVGRVERERF----GVVLLDEYQDTSHAQVELLKSLFGGGHPVT--AVGDPCQSIYAW 305 Query: 476 SGAQMSLTTAF-----HENFGEGERCDLDTTYRFNSRIGEVAN 513 GA + F H + E +R +L ++R + I VAN Sbjct: 306 RGASTGTLSRFPGDFPHADGTEADRLELTASWRNRASILTVAN 348 >UniRef50_A9ETX5 ATP-depentend DNA helicase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9ETX5_SORC5 Length = 820 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 98/321 (30%), Positives = 141/321 (43%), Gaps = 59/321 (18%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN QARA + LL+ AGAGSGKT V+V R L+ P +IL + F KAA E Sbjct: 24 LNEPQARAASHAAGPLLIFAGAGSGKTRVIVYRIANLIVTHRVPPYRILAVTFTNKAATE 83 Query: 257 MDERIRERLHTEDIT----ARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 M R+ E L DI TFHA+ ++++ ++ A + FI Sbjct: 84 MKRRL-EGLIGPDIVKDLWVGTFHAVCARLLRR-----------HHEAAGLDKNFII--- 128 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 +++A M + E N D R++ SR + + G AE Sbjct: 129 YDDDDQRAV-----------MNRVLKELNLDDRRYPPRQVLSR----IHAEKQEGRGPAE 173 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE--------- 423 E + F I A +A++ LKA +AVDF L+ + I E Sbjct: 174 F------ERKGYFDDAI---ARCFEAYERHLKAASAVDFDDLLLAVLRIAEDPTSYAGED 224 Query: 424 -KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 +GRF +H+LVDEFQD++ + L+ A K S L VGDD Q+IYR+ GA + + Sbjct: 225 LRGRF----RHVLVDEFQDVNQVQYRLVRAFCK--SHDNLCVVGDDDQSIYRWRGADVRI 278 Query: 483 TTAFHENFGEGERCDLDTTYR 503 F +F L+ YR Sbjct: 279 VRGFRRDFPHATVVKLEQNYR 299 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 32/137 (23%) Query: 522 QLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAA 581 L++ + SL + +++A DE+ L L+++S L+ S A Sbjct: 535 NLRELVQSLVDYEQEATAAGDEATLAGYLERVS---------LV----------SDVDAL 575 Query: 582 TRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAE 641 PK+ + MTIHA+KG + V + G++E D FP +++ P E Sbjct: 576 ADVPKVAM--MTIHAAKGLEFHAVFLTGMEE--DLFPFRSQD---------PNRKGDIEE 622 Query: 642 ERRLMYVALTRARHRVW 658 ERRL YVA+TRAR R+W Sbjct: 623 ERRLAYVAITRARERLW 639 >UniRef50_C8S459 UvrD/REP helicase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S459_9RHOB Length = 850 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 97/343 (28%), Positives = 155/343 (45%), Gaps = 55/343 (16%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q AV+ + +L+LAGAG+GKT L AR LL G+A P +IL + F KAA E Sbjct: 32 LNPEQRAAVLAPDGPVLMLAGAGTGKTKALTARIVHLLTTGKARPNEILAVTFTNKAARE 91 Query: 257 MDERIRERL-HTEDIT-ARTFHALALHIIQQGSKKVPIVSK---LENDTAAR--HELFIA 309 M +R+ L E + TFH++++ I+++ ++ V + S L+ D R +L +A Sbjct: 92 MKDRVGRMLGQVEGMPWMGTFHSISVKILRRHAELVGLKSNFTILDTDDQIRLLKQLIVA 151 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 E +E +W R LA +D W + Sbjct: 152 E------------------NIDEKRWPA------------RLLAGLIDSWKN-------- 173 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK----- 424 +A A P ++ R L + ++ L+A NA DF L+ + I + Sbjct: 174 RAWTPAKVPSSEASAYNNR---GTELYQMYQDRLRALNATDFGDLLLHVVTIFQTHPDVL 230 Query: 425 GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 ++ +++ILVDE+QD + + L L + + + VGDD Q+IY + GA++ Sbjct: 231 AQYQRWFRYILVDEYQDTNVAQYLWLRLLAQ--AHRNICCVGDDDQSIYGWRGAEVGNIL 288 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 F ++F L+ YR I A+ I N G+L K L Sbjct: 289 RFEKDFPGAHVVRLEQNYRSTPHILAAASAVIAANKGRLGKTL 331 Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 20/107 (18%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 ++ MT+HA+KG + V + G ++G FP+ + M+E+ L VE EERRL Y Sbjct: 634 KVSIMTLHAAKGLEFPVVFLPGWEDGL--FPS---QRSMDESGLKGVE-----EERRLAY 683 Query: 648 VALTR----------ARHRVWALFNKENPSPFVEILKNLDVPVARKP 684 V +TR A RV+ + PS F++ L V V P Sbjct: 684 VGITRAEALCTISFAANRRVYGQWQSALPSRFIDELPEAHVEVLTPP 730 >UniRef50_A8ZYJ7 UvrD/REP helicase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZYJ7_DESOH Length = 621 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 92/357 (25%), Positives = 151/357 (42%), Gaps = 51/357 (14%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 S LNP Q +A + +V+A GSGKT ++ R G L+ + PE IL L F R AA Sbjct: 2 SDLNPEQQKASEFTDGVCVVIAVPGSGKTRTMMERIGILVNKHGIPPENILGLTFTRNAA 61 Query: 255 EEMDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 +EM R+ L + + T H+ +++ I+S E +FI E Sbjct: 62 DEMRHRLVPVLGEMSSRVFLTTIHSFCYTLLRSEGIVFEILSGRE------QMIFIKEVI 115 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 K+ ++ A L E S+ + N E+ + MH G Sbjct: 116 KKLKIREVSAG---MVLGE---ISLAKNNLIGCEEFRV--------------MHAG---- 151 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRF 427 + + +A + +A+ A +DF L+ + +L + ++ Sbjct: 152 -------------DRTMVRIADIYEAYDREKSARMLMDFDDLLVRTHDMLNNRIDIREKY 198 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + H+LVDEFQD +P + +L L +N Q + + GDD QAI+ F+GA + F Sbjct: 199 QEVFCHLLVDEFQDTNPAQMEILKLLIPENRQGSFWCTGDDHQAIFSFTGASVGNIIHFK 258 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDES 544 F + ++ L YR +I I+ N Q+ K L + N D + V +L+ S Sbjct: 259 SIFPDSQQMILHVNYRSTPQILAACQNLIRHNEKQIHKTLKT-DNPDGEEVIVLESS 314 >UniRef50_Q2RLV0 UvrD/REP helicase n=2 Tax=cellular organisms RepID=Q2RLV0_MOOTA Length = 1232 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 93/341 (27%), Positives = 147/341 (43%), Gaps = 52/341 (15%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q AV ++V+AG G+GKT LV R +L+ +P +I + F KAA E Sbjct: 536 LNPEQQSAVTAATGPVVVIAGPGTGKTRTLVYRLAYLIKERGVAPGEIAAVTFTNKAAAE 595 Query: 257 MDERIRERLHTED----ITARTFHALALHIIQQ---GSKKVPIVSKL--ENDTAARHELF 307 + +R+ + L D +T TFH++ L ++Q GS + K DT A L Sbjct: 596 IRQRVADLLGDRDGMESLTVGTFHSICLDLLQSSLTGSPGADLQGKPVGTTDTPASPRLT 655 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 + + +A A R+ L ++ RR L R +SL++ G Sbjct: 656 VVD--------EADA---REILA----------GVLAEKGTGRRGLPGLQRRISLLKSRG 694 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAI---VILEK 424 ++ +PE DL P+ +A++ L A +D+ ++ +A+ + + Sbjct: 695 -----LLPDSPEVPADL--------RPIYRAYQERLAAYGVLDYDDILLKALELPALRPE 741 Query: 425 G----RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQM 480 G + P+ H+LVDEFQD++ + L+ + LF +GD QAIY F GA Sbjct: 742 GAPAFQGPVPFTHLLVDEFQDVNAVQYRLVK--KWTGDGKNLFVIGDPDQAIYGFRGADY 799 Query: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPG 521 E+F L YR I A + NPG Sbjct: 800 RFFGQLLEDFPAARVFRLTRNYRSTPVILRAAAAVVAHNPG 840 >UniRef50_D0JAI1 ATP-dependent DNA helicase n=2 Tax=Blattabacterium RepID=D0JAI1_BLASB Length = 709 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 95/348 (27%), Positives = 153/348 (43%), Gaps = 68/348 (19%) Query: 196 PLNPAQARAV--VNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 LN +Q + + +NG +LVLAGAGSGKT V+ R ++ +P IL L F +KA Sbjct: 2 SLNSSQRKIIETING--PILVLAGAGSGKTRVITYRIVHMIQNIGINPSNILALTFTKKA 59 Query: 254 AEEMDERIRERLHTE---DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 A+EM RI + + IT TFH++ F Sbjct: 60 AKEMKHRISNMIDQKKLNQITLGTFHSI----------------------------FSIL 91 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 RK+ + G++ T Q D E + +++ ++ +SL + Sbjct: 92 LRKE-----SHLLGYKSNYTIYDQR--------DSENVIKKILEDINLDISL----STKE 134 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALK----AENAVDFSG-LIHQAIV----- 420 I S + + K K L+K +K +K AE A+DF L+H + Sbjct: 135 IRRIISEYKNNLYINKKNNKQSECLIKIYKSYIKRCLQAE-ALDFDDILLHTNHLFSHFP 193 Query: 421 -ILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQ 479 +L K + + +K+IL+DE+QD + + ++ +L Q LF VGDD Q+IY F GA+ Sbjct: 194 NVLRK--YQNKFKYILIDEYQDTNLSQNTIIKSLAFQ--HKNLFVVGDDAQSIYAFRGAK 249 Query: 480 MSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 +S FH ++ + L+ YR I + +N I N Q+ K + Sbjct: 250 ISNILNFHIDYKNAKVFRLEQNYRSTHHIVQASNNIISFNKNQILKKI 297 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 12/69 (17%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 ++ MT+H SKG + V I+GL+E + FP+ + F EERRL Y Sbjct: 539 KVSLMTVHLSKGLEFSIVFIIGLEE--NLFPSKS----------SLDNQFKIEEERRLFY 586 Query: 648 VALTRARHR 656 VALTRA+ + Sbjct: 587 VALTRAQKK 595 >UniRef50_C9LD15 ATP-dependent DNA helicase PcrA n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LD15_9BACT Length = 794 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 102/401 (25%), Positives = 179/401 (44%), Gaps = 61/401 (15%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN +Q +AV + L++AGAGSGKT VL + +LL G P +IL L F KAA E Sbjct: 6 LNESQRQAVQYCDGPSLIIAGAGSGKTRVLTYKVAYLLQNG-YQPWEILALTFTNKAARE 64 Query: 257 MDERIRERLHTEDIT---ARTFHALALHI--IQQGSKKVPIVSKLENDTAARHELFIAEW 311 M ERI + + + A TFH++ I I+ + +P + + Sbjct: 65 MRERIAQLVEPAAVAMLWAGTFHSIFARILRIEHAALGLPSTFSIYD------------- 111 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQR--RLASRLDRWVSLMRMHGGA 369 A AK + + E++ D+K+ R +A+R+ + + + Sbjct: 112 -------AADAKSLVKSIIRELKL---------DDKIYRPGTVAARISDAKNHLMLPDEY 155 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK----- 424 A+ + + RD ++ +++ ++ + A NA+DF L+ + ++ Sbjct: 156 AAD-VDRMNRDKRDGLTELVRIYNIYIERCRQA----NALDFDDLLLRTYLLFHDRPDIC 210 Query: 425 GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 +++ ++++LVDE+QD + + ++ L + L VGDD Q+IY F GA + Sbjct: 211 EKYVRKFRYVLVDEYQDTNAVQYRIIRYLCP--GEARLCVVGDDAQSIYAFRGADIGNIL 268 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTN-GDKKAVTLLDE 543 F ++ + L+ YR I + AN I +N ++ K + S GDK + Sbjct: 269 NFQTHYPSAKLIKLERNYRSTENIVQAANSIISRNKNRIPKTIYSENGAGDKVCI----- 323 Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRW 584 + A DK AK + I L R HH+ SL++ A + Sbjct: 324 --ISAYTDKDES-AKVVKEIFKLRRQHHI---SLDQVAILY 358 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 13/132 (9%) Query: 533 GDKKAVTLLDESQLDALLDKLSGYAKPEER-ILILARYHHMRPASLEKAATRWPKLQIDF 591 GD+ L + LL+ + G+ +E +++LA Y ++ + ++ Sbjct: 501 GDRTPEGLSKWENIQELLNSIKGFESEQETGVVLLADYLPQVVLLTDQDQQDDDEPKVTL 560 Query: 592 MTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALT 651 MT+HA+KG + + V + GL++G FP A + E EERRL YVA+T Sbjct: 561 MTVHAAKGLEFEAVFVTGLEDGL--FPGTAAKYSAREL----------EEERRLFYVAVT 608 Query: 652 RARHRVWALFNK 663 RA+ + + K Sbjct: 609 RAKAHCFITYAK 620 >UniRef50_Q2SKI4 UvrD/REP helicase family protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SKI4_HAHCH Length = 631 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 102/379 (26%), Positives = 166/379 (43%), Gaps = 55/379 (14%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 S LN Q +AV + LVLAGAGSGKT V+ +A L+ +A P+ I+L+ F KAA Sbjct: 6 SYLNEEQFKAVNATTGATLVLAGAGSGKTRVVTYKAAHLILNEKALPKSIILVTFTNKAA 65 Query: 255 EEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM R+ E + + I TFH L L +I + S P+ + + R I+E Sbjct: 66 NEMRSRLGELIGPIAKTIHIGTFHKLFLDLILKPSADRPVTQRYGYNQTTR---VISE-- 120 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 E + + + L EE Q V +E L L R Sbjct: 121 ---HEARGFIESFWSNLGEEQQRFVARNGISLNEVL-----------ACLSRARANGFGS 166 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISP-- 430 + + P E+ + ++M L + + NA+D +++ A +L++ + Sbjct: 167 IDYAPPMELSNRERMIDRIMIALWRNLDEEKRKLNAIDADDILYIARHVLKEDAELRDAL 226 Query: 431 ---WKHILVDEFQDISP---QRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 KH ++DEFQD + + LLAA + ++ VGD Q+IY+F G++ ++ Sbjct: 227 QYHLKHFIIDEFQDCNYLQFEAIRLLAA-----NAVSITVVGDAKQSIYQFRGSEPTVFQ 281 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLK------------------KP 526 AF E + LDT YR +++ +++N+ P +L+ P Sbjct: 282 AFLEAYESPSVRVLDTNYRSLNKLVQLSNKLADSMPHRLQDDIAMRAHKSGDGVVQFASP 341 Query: 527 LNSLTNGDKKAV---TLLD 542 LN +T ++ A TLLD Sbjct: 342 LNVMTESNEVAANIQTLLD 360 >UniRef50_O31626 Putative ATP-dependent DNA helicase yjcD n=3 Tax=Bacillus RepID=YJCD_BACSU Length = 759 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 88/339 (25%), Positives = 145/339 (42%), Gaps = 43/339 (12%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q +AV E LLVLAGAGSGKT VL ARA ++ PE +LL+ F KA E Sbjct: 136 LNTDQLKAVTETEGPLLVLAGAGSGKTRVLTARAAHMIEHLGIPPENMLLVTFTTKAVAE 195 Query: 257 MDERIRERLHTEDITAR-----TFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 M ER+ + + R TFH+L I+ + +K + L EW Sbjct: 196 MKERMANQYGLQPAKVRRIVTGTFHSLFYKILYHSNS-----AKWNGE-----HLLKMEW 245 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRW-VSLMRMHGGAQ 370 +++ KKA + + ++ + FW + + D W + R++ + Sbjct: 246 QREQYIKKALYEEGIDEKESPVDQALQQIGFWKNTYVPNERIPLKDEWEKQVYRLYEHYE 305 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISP 430 + + + D+ S +L ++ L+ Q + S Sbjct: 306 RQKKEHSQFDFDDMASACYELF----------------IERPDLLEQ---------YQSR 340 Query: 431 WKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENF 490 + +IL+DEFQDI+P + ++ L + + L VGDD Q+IY F G+ S F +++ Sbjct: 341 FTYILIDEFQDINPVQYKIMQML--ASPEQNLCCVGDDDQSIYAFRGSNPSFILDFQKDY 398 Query: 491 GEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS 529 + L YR I A+ +++N + K L + Sbjct: 399 PGAKTIYLTANYRSTHPIVSSADIVVKKNKNRYAKTLEA 437 Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust. Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 17/97 (17%) Query: 565 ILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGS---DGFPAAA 621 LA HMR A EK T +Q+ MTIH SKG + V ++G +GS D A Sbjct: 646 FLAHVDHMRAA--EKNRTDEHGVQL--MTIHRSKGLEFKTVYVLGTVDGSIPHDFSLETA 701 Query: 622 RESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVW 658 R+ +EA L EERRL+YVA+TRA+ ++ Sbjct: 702 RKG--DEAAL--------EEERRLLYVAMTRAKQHLY 728 >UniRef50_UPI00016C5306 ATP-dependent DNA helicase n=2 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C5306 Length = 755 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 85/336 (25%), Positives = 152/336 (45%), Gaps = 44/336 (13%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 L P Q AV++GE LL+LAGAGSGKT V+ R +LL R IL + F KAA E Sbjct: 11 LTPDQRAAVMHGEGPLLILAGAGSGKTRVITRRVAYLL-RAGVRAHNILAITFTNKAAGE 69 Query: 257 MDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCS 316 M R+ + + TFH+L +++Q ++++ ++ + R + Sbjct: 70 MKNRVEKLAPGNRVWVSTFHSLGARLLRQYAERLGFDRNF--------TIYDTDDRNKLV 121 Query: 317 EKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIAS 376 + +A G + ++++ PE R+A + + + ++ Q E A+ Sbjct: 122 KDALEAAG-----IDNVKFT-PE-----------RIAGAISKAKN--QLVTPPQYERTAT 162 Query: 377 APEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRFISPW 431 D F K + + P ++ L++ NA+DF L++ + L+ + S + Sbjct: 163 ------DFFQKTVAAVYP---RYEKRLRSANAMDFDDLLYLPAMALKQNEELRAELDSRF 213 Query: 432 KHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFG 491 ++I++DE+QD + + ++ L N + VGD Q+IY++ G+ + + F +F Sbjct: 214 RYIMIDEYQDTNSAQYQIVKQLSINNPNVCV--VGDPDQSIYKWRGSDIKIILDFERDFP 271 Query: 492 EGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 L YR I A+ I N + KK L Sbjct: 272 NARTITLAQNYRSTKSIIRAASVLIDHNKQRKKKDL 307 >UniRef50_P45612 Probable DNA helicase II homolog n=4 Tax=Mollicutes RepID=UVRD_MYCCT Length = 722 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 81/342 (23%), Positives = 151/342 (44%), Gaps = 41/342 (11%) Query: 204 AVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRE 263 AV+N + + ++AGAGSGKT V+ + +L+ + P +IL + F KAA+EM ER+ + Sbjct: 17 AVLNIDKPVRIIAGAGSGKTRVITTKIAYLIEKQNIDPSRILAVTFTNKAAKEMKERVLQ 76 Query: 264 RLHTEDIT--ARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQ 321 + + TFH+ +++ K + + K I + Q K+ Sbjct: 77 ITNNSFKSPFISTFHSWCSKVLRIDGKHIGLEDKF----------LIIDSDDQKRIIKSA 126 Query: 322 AKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEI 381 K L+E D + +++ ++ W E + E I Sbjct: 127 LKESNIELSEN-----------DKKTFDKKILYKIKEW-----------KEELVDPSEAI 164 Query: 382 RDLFSKRIKLMAPLLKAWKGALKAENAVDFSGL-IHQAIVILEKGRFISPWK----HILV 436 + S K A + + ++ L N++DF L I+ + + ++ W+ ++LV Sbjct: 165 LNATSTLEKNFAVIYRLYQNTLLKNNSLDFDDLQIYVYRLFKQNNEILNKWRNAYDYVLV 224 Query: 437 DEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERC 496 DEFQD + + +L+ L + T+ VGD Q IY + GA++ + F++ + Sbjct: 225 DEFQDTNELQFSLIKFLTINTNHLTV--VGDPDQTIYSWRGAKLDIILNFNKTYSNAISI 282 Query: 497 DLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAV 538 L+ YR +I +++N FI+ N + K + + KK V Sbjct: 283 VLNQNYRSTKQILDISNSFIKNNKFREHKEIFTNNKSGKKVV 324 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 12/84 (14%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 ++ +T+HA+KG + V I GL +G FP+ E+ + E EERR +Y Sbjct: 554 KVSLLTVHAAKGLENKVVFITGLNQGI--FPSRISETSINEL----------EEERRALY 601 Query: 648 VALTRARHRVWALFNKENPSPFVE 671 VALTRA+ ++ + K + S ++ Sbjct: 602 VALTRAKDELFLTYVKGDYSHIMQ 625 >UniRef50_B2S4R5 DNA helicase II n=3 Tax=Treponema RepID=B2S4R5_TREPS Length = 670 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 101/368 (27%), Positives = 163/368 (44%), Gaps = 48/368 (13%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 S LN AQ +AV + LL+LAGAGSGKT V+ + L+ + PEQIL + F KAA Sbjct: 6 SALNEAQRQAVCHYGSPLLILAGAGSGKTRVITTKIAHLIRSRQVRPEQILAVTFTNKAA 65 Query: 255 EEMDER-IRERLHTEDITARTFHALALHIIQQGSKKVPIVS--KLENDTAARHELFIAEW 311 EM R + T TFHAL + I+++ + ++ + + +D R + + Sbjct: 66 REMRTRACALESAAQGATICTFHALGVWILRRYAVRLGLNPHFSIYDDHDVR--ALLPKI 123 Query: 312 RKQCSEKKAQ--AKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 C +A A+G +++ + + +F E + R+ Sbjct: 124 LPHCDHSRAGMLARG----ISQAKDYGLDCASF---ESVHARV----------------- 159 Query: 370 QAEMIASAPE-EIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFI 428 SAP R + R A + ++ VDF LI + +L + + + Sbjct: 160 ------SAPACAARAVLGDR--QFAHAYACYHRRMREMGTVDFGDLIMLPVQLLREHQDV 211 Query: 429 SP-----WKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 + W+ ++VDE+QD + + L L + T L VGDD Q+IYRF GA++ Sbjct: 212 AEQLHARWQVVMVDEYQDSNVAQFHFLQVL--TGAHTYLCVVGDDDQSIYRFRGAEVKNI 269 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS-LTNGDKKAVTLLD 542 F E F + L+ YR I VA+ +++N +L K L + T G K + LL+ Sbjct: 270 LTFPEFFQNTQIIRLEYNYRSTDAILRVADSVVKKNQDRLGKALIAQRTGGTKPRLFLLN 329 Query: 543 ESQLDALL 550 +A L Sbjct: 330 NQDEEAAL 337 >UniRef50_A5TXQ2 Superfamily I ATP-dependent helicase n=15 Tax=Fusobacterium RepID=A5TXQ2_FUSNP Length = 737 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 82/334 (24%), Positives = 146/334 (43%), Gaps = 63/334 (18%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q A + S+L+LAGAGSGKT + R ++ SP IL + F KAA+E Sbjct: 9 LNDKQREAASQIDGSILILAGAGSGKTRTITYRIAHMIENVGISPYSILAVTFTNKAAKE 68 Query: 257 MDERIRERLHTEDI----TARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 M ER+ + DI T TFH+ + +++ + +V Sbjct: 69 MRERVEGLVG--DIAKACTISTFHSFGMRLLRMYASEV---------------------- 104 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSL----MRMHGG 368 G+ P +D + Q+R+ + + ++ +++ Sbjct: 105 -----------GYN-----------PNFTIYDTDD-QKRIVKAILKGQNISFNGVKLTER 141 Query: 369 AQAEMIASAPEEIR--DLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR 426 +I+ EEI+ D +S K + + + AL NA+DFS ++ +L+K Sbjct: 142 DIVSIISKIKEEIKTPDEYSVINKQIIEVYDKYNKALLESNAMDFSDILLNTYKLLQKPE 201 Query: 427 FI----SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + + +K+I++DE+QD + + ++ + +++S L VGD+ Q+IY F GA + Sbjct: 202 ILEKVQNKYKYIMIDEYQDTNNLQYKIIDLIARKSSN--LCVVGDENQSIYGFRGANILN 259 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFI 516 F N+ + L+ YR + I + AN I Sbjct: 260 ILNFENNYNNAKIVKLEENYRSTTTILDAANELI 293 >UniRef50_Q28NL8 ATP-dependent DNA helicase, Rep family n=11 Tax=Rhodobacteraceae RepID=Q28NL8_JANSC Length = 817 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 101/348 (29%), Positives = 152/348 (43%), Gaps = 64/348 (18%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNPAQ AV + +L+LAGAG+GKT L AR L++ G A P +IL + F KAA E Sbjct: 34 LNPAQIAAVNQLDGPVLMLAGAGTGKTRALTARIAHLMSTGTARPNEILAVTFTNKAARE 93 Query: 257 MDERIRERLH--TEDIT-ARTFHALALHIIQQ-----GSKKVPIVSKLENDTAARHELFI 308 M R+ L E + TFHA+ + ++++ G K + ++ T +L I Sbjct: 94 MKTRVGHLLGQPAEGMPWLGTFHAICVKLLRRHAELAGLKSNFTILDTDDQTRLMKQLII 153 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 AE ++ +W R L S +D W + Sbjct: 154 AEE------------------IDDKRWPA------------RALGSIIDGWKN------- 176 Query: 369 AQAEMIASAPEEIRDLFSKR-IKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-- 425 +A P F+ + +KL A ++ LKA NA DF L+ I I + Sbjct: 177 -RALTPDKVPSADHGAFNHQGVKLYA----QYQARLKALNACDFGDLLLHVIQIFQDNDD 231 Query: 426 ---RFISPWKHILVDEFQDISPQRAA---LLAALRKQNSQTTLFAVGDDWQAIYRFSGAQ 479 ++ +++ILVDE+QD + + LLAA K + VGDD Q+IY + GA+ Sbjct: 232 LLQQYQRWFRYILVDEYQDTNVAQYLWLRLLAAGHK-----NICCVGDDDQSIYGWRGAE 286 Query: 480 MSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 + F ++F L+ YR I A+ I N G+L K L Sbjct: 287 VGNILRFEKDFPGAHVVRLEQNYRSTGHILAAASGVIAGNTGRLGKTL 334 >UniRef50_C8Q3Z5 UvrD/REP helicase n=2 Tax=Proteobacteria RepID=C8Q3Z5_9ENTR Length = 1144 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 102/335 (30%), Positives = 152/335 (45%), Gaps = 41/335 (12%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 PLN QA+A + + L+ AG G+GKT LV R LL G P +ILLL F KAA Sbjct: 196 PLNDEQAKAAAHRGVAFLLEAGPGTGKTQTLVGRVKGLLNEG-VDPRKILLLTFSNKAAG 254 Query: 256 EMDERIRERLHTEDITAR---TFHALALHIIQQGSKKV--PIVSKLENDTAARHELFIAE 310 EM ERI R+ + A TFH+ L ++++ K+ P ++ + T A EL E Sbjct: 255 EMAERI-ARVDSGAAAAMWIGTFHSFGLDLVRRFHDKLNLPQSPRMLDRTEAV-ELLEHE 312 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRL----DRWVSLMRMH 366 + K G + N +D ++ + + D V Sbjct: 313 FPKL---------GLVHYR-----------NLYDPSRIIADFLAGISRAKDEVVDASTYL 352 Query: 367 GGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR 426 AQA M SA E +++ +A + A++ + +DF L+ + +LE+ Sbjct: 353 KLAQA-MRDSAVENDAITDAEKAIEVAKVYAAYENLKQQSECIDFGDLVSLPVKLLEENE 411 Query: 427 FI-----SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMS 481 I S ++H+LVDE+QD++ LL A+ + L+AVGD Q+IYRF GA Sbjct: 412 AIRSHIQSTYEHVLVDEYQDVNHSSVRLLKAI--CGNGNNLWAVGDAKQSIYRFRGASSF 469 Query: 482 LTTAF-HENFGEGERCDLDTTYRFNSRIGEVANRF 515 T F +E+F G R L YR I +RF Sbjct: 470 NMTRFGNEDFPGGVRYRLKMNYRSVPEIVSTFSRF 504 >UniRef50_B5YD55 ATP-dependent DNA helicase n=2 Tax=Dictyoglomus RepID=B5YD55_DICT6 Length = 656 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 105/403 (26%), Positives = 180/403 (44%), Gaps = 57/403 (14%) Query: 187 DFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILL 246 +F ++E LN Q + V+ + LV+AG GSGKT +V R G+L+A G SP+ I+L Sbjct: 21 EFLERIEKD-LNEEQRKVVLEADGPSLVIAGPGSGKTRTIVYRVGYLVALG-YSPKNIML 78 Query: 247 LAFGRKAAEEMDER----IRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAA 302 L F +AA M R IRE + E+I TFH + I++ K + I + Sbjct: 79 LTFTNQAARHMINRTQALIRESI--EEIWGGTFHHVGNRILRVYGKIIGINEQYNILDRE 136 Query: 303 RHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSL 362 I E ++ ++ KG L E + V G WD+ + Sbjct: 137 DSLDLIDECLEELFPEENLGKG---ILGELFSYKVNTGKNWDE----------------V 177 Query: 363 MRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLI---HQAI 419 +++ AP+ I +I+++ + + ++ + N +D+ L+ ++ + Sbjct: 178 LKI----------KAPQII-----DKIEIVQKVFERYEKRKRELNVLDYDDLLFFWYRLL 222 Query: 420 VILEKGRFI--SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSG 477 + EK R I + +ILVDE+QD + + ++ R++N + VGDD Q+IY F G Sbjct: 223 LESEKTRKILNDRFLYILVDEYQDTNWLQGEIIRLTREENK--NILVVGDDAQSIYSFRG 280 Query: 478 AQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS-LTNGDKK 536 A + +F E F L YR I +AN I++N Q K + L +G K Sbjct: 281 ATIENILSFPEIFPGTRIFYLVFNYRSTPEIINLANEIIKRNTRQYFKEIKPVLKSGSKP 340 Query: 537 AVTLL--DESQLDALLDKLS-----GYAKPEERILILARYHHM 572 + + DE + +++ + G + +L + YH M Sbjct: 341 KLVWVRDDEEEAQFVVEVIKELHKEGVKYKDIGVLFRSNYHSM 383 >UniRef50_Q04T79 ATP-dependent DNA helicase n=6 Tax=Leptospira RepID=Q04T79_LEPBJ Length = 730 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 101/361 (27%), Positives = 164/361 (45%), Gaps = 62/361 (17%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q +AV+ +L+LAGAGSGKT V+ R LL ++I L F KAA E Sbjct: 9 LNEEQKKAVLQITGPVLILAGAGSGKTRVITHRIANLLVN--HGIDRICALTFTNKAAAE 66 Query: 257 MDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M ER++ + ++ +TFH+L L+I+ R E F + Sbjct: 67 MVERVKNLVPFLPTNLQIKTFHSLCLYIL-------------------RREAFFFGFDSA 107 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 + + L E + V + + D K + S L ++S G + +M+ Sbjct: 108 FTV-------YDTTLQESLLKQVVK-DLSLDPKFYK--PSMLGNYIS------GLKDKML 151 Query: 375 ASAPE-----EIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK----- 424 + PE E R FSK + + + K ++ A A DF LI + + + +K Sbjct: 152 S--PETYLEKEGRTDFSKTV---SAIYKEYEKRKDANRAFDFGDLIWKTVQLFQKSPDAI 206 Query: 425 GRFISPWKHILVDEFQDISP--QRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 ++ W++++VDE+QD + + LL A K+N L VGDD Q+IY + GA + Sbjct: 207 AKYRHKWEYVMVDEYQDTNKVQYQLVLLLAGEKRN----LCVVGDDDQSIYSWRGADIGN 262 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD 542 F ++F E L+ YR +S I A++ I N + +K + TN K + +L+ Sbjct: 263 ILNFEKDFPESTVIKLEENYRSSSNIILAASKVISNNTQRKQKEI--FTNNPKGSPVVLN 320 Query: 543 E 543 E Sbjct: 321 E 321 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 11/70 (15%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 ++ MT+H +KG + V + GL+EG+ FP + +E++ F D EERRL YV Sbjct: 549 VNLMTVHNAKGLEFKIVFLSGLEEGT--FPHSMS---LEDS------HFGDEEERRLFYV 597 Query: 649 ALTRARHRVW 658 ALTRAR +++ Sbjct: 598 ALTRAREQLF 607 >UniRef50_B2I385 Superfamily I DNA and RNA helicase n=17 Tax=Acinetobacter RepID=B2I385_ACIBC Length = 659 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 88/349 (25%), Positives = 151/349 (43%), Gaps = 64/349 (18%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q +A + LVLAGAG GKT +VARA +L+ +G QI +L F R+AA E Sbjct: 10 LNAQQKKAATTMAQNCLVLAGAGCGKTKTIVARAAYLIDQG-LPANQIQILTFTRRAASE 68 Query: 257 MDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 + R+ + + + + A TFH +++++ Sbjct: 69 IVARVEQHVGAQAKGLRASTFHTFCMYLLR------------------------------ 98 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDR---------WVSLMRM 365 + QA G Q+S+ + DD+ L RL D+ L Sbjct: 99 ---RNPQAFGL-------TQFSIIDR---DDQLLMFRLLRGKDKDNVLPKAAELCDLYSY 145 Query: 366 HGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG 425 Q+++ + +++ + + + ++ A L+K ++ + N +D+ ++ V L+ Sbjct: 146 ARNTQSKLSEALLKQLPEAYEYKSQI-AELMKTYEQRKRERNFLDYDDILSIVAVHLQNS 204 Query: 426 RFISPW-----KHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQM 480 ++ W + +LVDE QD +P + ALL L + LF VGDD Q+IY F GA Sbjct: 205 EALTNWVAGFCQALLVDEMQDTNPLQWALLQPLI---GKVKLFCVGDDAQSIYGFRGADF 261 Query: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS 529 +F E + LD YR I +++N + +P +K L + Sbjct: 262 ENIHSFKERIPDAVIHTLDLNYRSTQEILDLSNWLLAHSPIDYQKQLQA 310 >UniRef50_B5K795 UvrD/REP helicase n=5 Tax=Rhodobacterales RepID=B5K795_9RHOB Length = 837 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 104/380 (27%), Positives = 156/380 (41%), Gaps = 72/380 (18%) Query: 180 AMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEA 239 AM + D+F LNPAQ +AV +L+LAGAG+GKT L R L+A G A Sbjct: 28 AMAPPHVDYFEG-----LNPAQRQAVETLNGPVLMLAGAGTGKTKALTCRIAHLMATGGA 82 Query: 240 SPEQILLLAFGRKAAEEMDERIRERLHTEDITAR---TFHALALHIIQQGSKKVPIVSKL 296 P++IL + F KAA EM RI R TFHA+ + ++++ ++ V + S Sbjct: 83 RPDEILAVTFTNKAAREMMNRIGGLTQGASDGMRWLGTFHAICVKLLRRHAELVGLKSNF 142 Query: 297 EN-DTAARHELFIAEWRKQCSEKK--------AQAKGWRQWLTEEMQWSVPEGNFWDDEK 347 DT + L R ++K GW+ Q V E + +DD+ Sbjct: 143 TILDTDDQLRLLKQLIRASSIDEKRWPPRMLAGIIDGWKNKAWTPAQVPVGESSAYDDKG 202 Query: 348 LQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAEN 407 + DL++ A++ LK N Sbjct: 203 I----------------------------------DLYA-----------AYQHRLKELN 217 Query: 408 AVDFSGLIHQAIVILEKGRFISP-----WKHILVDEFQDISPQRAALLAALRKQNSQTTL 462 A DF L+ + I + I +K+ILVDE+QD + + L L + + Sbjct: 218 ACDFGDLLLHMVTIFQTHADILATYQRWFKYILVDEYQDTNVAQYLWLRLLAQ--GHKNI 275 Query: 463 FAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQ 522 VGDD Q+IY + GA++ F ++F L+ YR I A I N + Sbjct: 276 CCVGDDDQSIYGWRGAEVGNILLFEKDFPGAHVVRLEQNYRSTGHILGAAAGVIDANKDR 335 Query: 523 LKKPLNSLTNG-DKKAVTLL 541 L K L T+G D + V L+ Sbjct: 336 LGKTL--FTDGEDGEKVRLI 353 >UniRef50_C6NVE2 ATP-dependent DNA helicase Rep n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NVE2_9GAMM Length = 663 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 112/402 (27%), Positives = 172/402 (42%), Gaps = 74/402 (18%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV +LVLAGAGSGKT V+ + L+ P I + F KAA E Sbjct: 8 LNGPQREAVARVHGPVLVLAGAGSGKTRVITRKIVHLIQDHGVEPRHIAAVTFTNKAARE 67 Query: 257 MDERIRERLH---TEDITARTFHALALHIIQQGSKKV------PIVSKLENDTAARHELF 307 M R+++ L +T TFH L L I++Q ++ +V ++ T R+ Sbjct: 68 MKGRVQQSLEGRSARGLTISTFHRLGLEILRQDITQLGYRENFSVVDPGDSLTLVRN--- 124 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 L EMQ G E +Q R++ Sbjct: 125 ---------------------LLREMQ-----GPSDLAESIQARIS-------------- 144 Query: 368 GAQAEMIASAPEE--IRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK- 424 +A+ PE+ IRD + L + + ++ ALKA N+VD LI +L + Sbjct: 145 --KAKNDGHGPEDMPIRDRLDE---LAQRVYRPYQRALKACNSVDLDDLILLPTELLSRF 199 Query: 425 ----GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQM 480 R+ +++LVDE+QD + + LL L K+ T AVGDD Q+IY + GA Sbjct: 200 AEAQERWQERIRYLLVDEYQDSNGAQYRLLQNLLKKRQNLT--AVGDDDQSIYSWRGAAA 257 Query: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL-NSLTNGDKKAVT 539 ++F + L+ YR RI + AN I NP +K L +SL GD+ V Sbjct: 258 DNLQRLAQDFPDLRLIKLEQNYRSTGRILQAANHLIAHNPHLFEKKLWSSLGEGDRIQVI 317 Query: 540 L----LDESQ--LDALL-DKLSGYAKPEERILILARYHHMRP 574 + DE++ ++A+L D+ + + ++ H RP Sbjct: 318 VARDETDEAEQVVNAILRDRFQRQGEYRDYAILYRSNHQSRP 359 >UniRef50_A7VD84 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A7VD84_9CLOT Length = 672 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 92/339 (27%), Positives = 147/339 (43%), Gaps = 56/339 (16%) Query: 201 QARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDER 260 Q A+ + +LVLAG GSGKT+V+ R ++L + + QIL++ F + AA EM R Sbjct: 11 QTDAIRYEDGPMLVLAGPGSGKTTVITYRVKYMLEQTGINGNQILVITFTKAAANEMRTR 70 Query: 261 IRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEK 318 E++ +++ +T TFH++ I+ RH Sbjct: 71 F-EKISGYSDGVTFGTFHSVFFMIL-------------------RH-------------- 96 Query: 319 KAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAP 378 A + E ++ + G EK + D +++ G ++EM P Sbjct: 97 -AYGYNSSNIILESEKYQIINGII---EKHNMEYNGQDDFAKNVIAEIGLVKSEM---KP 149 Query: 379 EEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISP-----WKH 433 E + + + + L+A N +DF ++ +L I +++ Sbjct: 150 VEQYHSVNMKADDFQITYREYDEILRANNKIDFDDMLVFTYELLRDRSDIRKMWQQRFQY 209 Query: 434 ILVDEFQDIS---PQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENF 490 IL+DEFQDI+ Q LL +KQN +FAVGDD Q++Y F GA L F F Sbjct: 210 ILIDEFQDINWIQYQTVKLLLG-KKQN----IFAVGDDDQSVYGFRGADTKLMLGFPNEF 264 Query: 491 GEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS 529 L+T YR +S I E A R I+ N + KK ++S Sbjct: 265 PGTRLVYLNTNYRCSSAIVESACRIIKNNKERYKKAIHS 303 >UniRef50_A1TNG2 ATP-dependent DNA helicase UvrD n=11 Tax=cellular organisms RepID=A1TNG2_ACIAC Length = 818 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 99/359 (27%), Positives = 156/359 (43%), Gaps = 52/359 (14%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV L+LAGAGSGKT VL R WLL G ASP IL + F KAA+E Sbjct: 35 LNDEQLAAVTLPAGHALILAGAGSGKTRVLTTRIAWLLQNGYASPGSILAVTFTNKAAKE 94 Query: 257 MDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M R+ L + + TFH L +++ K + + + I + + Q Sbjct: 95 MTARLSAMLPVNVRGMWIGTFHGLCNRLLRAHHKSAGLPATFQ----------ILDTQDQ 144 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 S K K Q+++ E +R ++ ++S G + E + Sbjct: 145 LSAVKRLCK----------QFNIDE---------ERFPPKQMAYFIS------GCKEEGL 179 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRFIS 429 + RD ++ L + ++ + E VDF L+ ++ +L + + Sbjct: 180 RPGDVDARDADGRK---KVELYQLYEEQCQREGVVDFGELMLRSYELLRDNDPIRAHYQR 236 Query: 430 PWKHILVDEFQDISPQRAALLAALR------KQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 ++HILVDEFQD + + A L + + + ++ AVGDD Q+IY F GA++ Sbjct: 237 RFQHILVDEFQDTNKLQYAWLKQIAGDVVDGRLVTHGSVLAVGDDDQSIYAFRGARVGNM 296 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD 542 F F + L+ YR S I + AN I N +L K L + T G + V + + Sbjct: 297 QDFVREFDVRHQIKLEQNYRSYSNILDSANALISHNSRRLGKNLRT-TQGPGEPVRVYE 354 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/74 (41%), Positives = 37/74 (50%), Gaps = 20/74 (27%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPD----AEERR 644 + MT+HASKG + D V I G MEE L P D EERR Sbjct: 624 VQLMTVHASKGLEFDAVFIGG----------------MEEGLFPHENSMSDRDGLEEERR 667 Query: 645 LMYVALTRARHRVW 658 LMYVA+TRAR R++ Sbjct: 668 LMYVAITRARKRLY 681 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P15038 Helicase IV n=169 Tax=cellular organisms RepID=H... 902 0.0 UniRef50_A9ZEX9 Helicase IV (75 kDa helicase) n=15 Tax=Enterobac... 758 0.0 UniRef50_Q6LST7 Hypothetical helicase IV n=5 Tax=Gammaproteobact... 649 0.0 UniRef50_D0YXK5 DNA helicase IV n=1 Tax=Photobacterium damselae ... 647 0.0 UniRef50_A5EZU3 Helicase IV n=56 Tax=Vibrionales RepID=A5EZU3_VIBC3 610 e-173 UniRef50_Q5E4C9 DNA helicase IV n=3 Tax=Aliivibrio RepID=Q5E4C9_... 597 e-169 UniRef50_D0IB53 DNA helicase IV n=1 Tax=Grimontia hollisae CIP 1... 588 e-166 UniRef50_C4LER9 UvrD/REP helicase n=1 Tax=Tolumonas auensis DSM ... 577 e-163 UniRef50_A6FAM2 Hypothetical helicase IV n=1 Tax=Moritella sp. P... 462 e-128 UniRef50_A4CC59 DNA helicase IV n=1 Tax=Pseudoalteromonas tunica... 462 e-128 UniRef50_Q3IIK2 Putative helicase IV n=1 Tax=Pseudoalteromonas h... 421 e-116 UniRef50_A5UP48 DNA helicase, UvrD/REP helicase family n=2 Tax=M... 395 e-108 UniRef50_C4FEN7 Putative uncharacterized protein n=3 Tax=Bifidob... 385 e-105 UniRef50_B8I5U1 ATP-dependent DNA helicase PcrA n=14 Tax=Firmicu... 383 e-104 UniRef50_A9KP66 UvrD/REP helicase n=12 Tax=Bacteria RepID=A9KP66... 375 e-102 UniRef50_B9AEJ9 Putative uncharacterized protein n=2 Tax=Methano... 373 e-101 UniRef50_A8MLJ7 ATP-dependent DNA helicase PcrA n=3 Tax=Firmicut... 368 e-100 UniRef50_D1A297 ATP-dependent DNA helicase PcrA n=3 Tax=Actinomy... 367 e-100 UniRef50_A1A2S5 Putative helicase IV n=2 Tax=Bifidobacterium Rep... 367 e-100 UniRef50_C4G2S8 Putative uncharacterized protein n=1 Tax=Abiotro... 367 e-100 UniRef50_C2KR35 ATP-dependent DNA helicase n=3 Tax=Mobiluncus Re... 365 3e-99 UniRef50_C6D4S8 ATP-dependent DNA helicase PcrA n=46 Tax=Firmicu... 365 3e-99 UniRef50_A8SUE8 Putative uncharacterized protein n=4 Tax=Clostri... 365 3e-99 UniRef50_C7N6W8 DNA/RNA helicase, superfamily I n=1 Tax=Slackia ... 365 4e-99 UniRef50_D2NR24 Superfamily I DNA and RNA helicase n=17 Tax=Bact... 364 1e-98 UniRef50_C7MAK0 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria... 363 1e-98 UniRef50_C9XK50 ATP-dependent DNA helicase n=5 Tax=Clostridium R... 362 2e-98 UniRef50_C4Z8S4 ATP-dependent DNA helicase PcrA n=17 Tax=Firmicu... 362 3e-98 UniRef50_C7MP63 DNA/RNA helicase, superfamily I n=6 Tax=Coriobac... 362 4e-98 UniRef50_UPI0001C3187F UvrD/REP helicase n=1 Tax=Conexibacter wo... 360 9e-98 UniRef50_C8WTI7 ATP-dependent DNA helicase PcrA n=2 Tax=Alicyclo... 360 9e-98 UniRef50_C8W206 ATP-dependent DNA helicase PcrA n=2 Tax=Clostrid... 359 2e-97 UniRef50_A0Q2Q4 ATP-dependent DNA helicase PcrA, putative n=23 T... 359 3e-97 UniRef50_B1I553 ATP-dependent DNA helicase PcrA n=6 Tax=Bacteria... 359 3e-97 UniRef50_C2CV85 Possible ATP-dependent DNA helicase n=2 Tax=Bifi... 358 3e-97 UniRef50_C2L0R7 ATP-dependent DNA helicase PcrA n=1 Tax=Oribacte... 357 6e-97 UniRef50_A8HYL6 DNA helicase II n=8 Tax=Rhizobiales RepID=A8HYL6... 357 7e-97 UniRef50_C5C915 ATP-dependent DNA helicase PcrA n=7 Tax=Actinomy... 357 1e-96 UniRef50_A1AUN0 ATP-dependent DNA helicase PcrA n=10 Tax=Desulfu... 357 1e-96 UniRef50_D2R9Y0 Putative ATP-dependent DNA helicase PcrA n=1 Tax... 356 1e-96 UniRef50_D1VUE5 ATP-dependent DNA helicase PcrA n=1 Tax=Peptonip... 356 2e-96 UniRef50_B2GM51 ATP-dependent DNA helicase UvrD1 n=10 Tax=Actino... 355 2e-96 UniRef50_A5GA79 UvrD/REP helicase n=10 Tax=Desulfuromonadales Re... 355 2e-96 UniRef50_A9WKU6 DNA helicase II n=2 Tax=Bacteria RepID=A9WKU6_RENSM 355 3e-96 UniRef50_Q8CRT9 ATP-dependent DNA helicase pcrA n=245 Tax=cellul... 355 4e-96 UniRef50_C1A3F5 ATP-dependent DNA helicase UvrD1 n=31 Tax=Bacter... 355 4e-96 UniRef50_C0VSX9 ATP-dependent DNA helicase n=2 Tax=Corynebacteri... 355 5e-96 UniRef50_A7VTM6 Putative uncharacterized protein n=1 Tax=Clostri... 353 9e-96 UniRef50_B1C8W2 Putative uncharacterized protein n=1 Tax=Anaerof... 353 1e-95 UniRef50_C6A858 Superfamily I DNA and RNA helicase n=18 Tax=Bifi... 353 1e-95 UniRef50_UPI00016C0C66 ATP-dependent DNA helicase PcrA n=1 Tax=E... 352 2e-95 UniRef50_Q6GFF2 ATP-dependent DNA helicase pcrA n=81 Tax=cellula... 352 2e-95 UniRef50_A4XKK0 ATP-dependent DNA helicase PcrA n=2 Tax=Clostrid... 351 7e-95 UniRef50_C8WV10 UvrD/REP helicase n=2 Tax=Alicyclobacillus acido... 350 9e-95 UniRef50_UPI00016B20E8 ATP-dependent DNA helicase PcrA n=1 Tax=c... 349 2e-94 UniRef50_B8FP41 ATP-dependent DNA helicase PcrA n=10 Tax=Firmicu... 349 2e-94 UniRef50_C8XDJ8 ATP-dependent DNA helicase PcrA n=2 Tax=Actinomy... 349 2e-94 UniRef50_Q029V8 ATP-dependent DNA helicase, Rep family n=1 Tax=C... 349 2e-94 UniRef50_Q2RGX9 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria... 349 2e-94 UniRef50_Q28NL8 ATP-dependent DNA helicase, Rep family n=11 Tax=... 348 3e-94 UniRef50_C7HU69 ATP-dependent DNA helicase PcrA n=2 Tax=Anaeroco... 348 5e-94 UniRef50_Q3A0S9 ATP-dependent DNA helicase PcrA n=1 Tax=Pelobact... 347 8e-94 UniRef50_A4XBE9 ATP-dependent DNA helicase PcrA n=18 Tax=Actinom... 347 1e-93 UniRef50_Q0TN58 ATP-dependent DNA helicase PcrA n=12 Tax=Clostri... 347 1e-93 UniRef50_A5CU47 ATP-dependent DNA helicase n=4 Tax=Actinobacteri... 346 1e-93 UniRef50_UPI000051001F putative ATP-dependent DNA helicase II n=... 346 1e-93 UniRef50_Q1IVP8 ATP-dependent DNA helicase, Rep family n=2 Tax=B... 345 3e-93 UniRef50_B7AA42 UvrD/REP helicase n=1 Tax=Thermus aquaticus Y51M... 345 4e-93 UniRef50_Q1PY53 Strongly similar to ATP-dependent DNA helicase n... 345 5e-93 UniRef50_C1SJ11 DNA/RNA helicase, superfamily I n=1 Tax=Denitrov... 345 5e-93 UniRef50_C1F7R1 ATP-dependent DNA helicase, UvrD/REP family n=1 ... 344 6e-93 UniRef50_B5K795 UvrD/REP helicase n=5 Tax=Rhodobacterales RepID=... 343 9e-93 UniRef50_C7QGW9 ATP-dependent DNA helicase PcrA n=8 Tax=Bacteria... 343 9e-93 UniRef50_C1XMD9 ATP-dependent DNA helicase, Rep family n=1 Tax=M... 343 9e-93 UniRef50_B4UKQ6 UvrD/REP helicase n=4 Tax=Anaeromyxobacter RepID... 343 2e-92 UniRef50_Q9CD72 ATP-dependent DNA helicase pcrA n=26 Tax=Actinom... 343 2e-92 UniRef50_C5NYN7 ATP-dependent helicase PcrA n=1 Tax=Gemella haem... 342 4e-92 UniRef50_D0BN23 ATP-dependent DNA helicase PcrA n=5 Tax=Firmicut... 341 5e-92 UniRef50_C7H111 ATP-dependent DNA helicase PcrA n=1 Tax=Eubacter... 341 5e-92 UniRef50_D0LJZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum D... 341 5e-92 UniRef50_A9H0P3 UvrD/REP helicase n=3 Tax=Alphaproteobacteria Re... 340 2e-91 UniRef50_B9X9R1 UvrD/REP helicase n=1 Tax=bacterium Ellin514 Rep... 339 2e-91 UniRef50_Q11GU4 ATP-dependent DNA helicase, Rep family n=53 Tax=... 339 2e-91 UniRef50_UPI00016C5306 ATP-dependent DNA helicase n=2 Tax=Gemmat... 339 2e-91 UniRef50_Q5PB91 DNA helicase II n=20 Tax=Rickettsiales RepID=Q5P... 338 3e-91 UniRef50_C7RHP9 UvrD/REP helicase n=3 Tax=Anaerococcus RepID=C7R... 338 3e-91 UniRef50_C9LD15 ATP-dependent DNA helicase PcrA n=1 Tax=Prevotel... 338 3e-91 UniRef50_C4V2E0 ATP-dependent DNA helicase n=1 Tax=Selenomonas f... 338 3e-91 UniRef50_B3EU74 UvrD/REP helicase n=4 Tax=Bacteroidetes RepID=B3... 338 4e-91 UniRef50_B3QYS3 UvrD/REP helicase n=9 Tax=Chlorobiaceae RepID=B3... 338 4e-91 UniRef50_Q1J014 UvrD/REP helicase n=4 Tax=Deinococci RepID=Q1J01... 338 5e-91 UniRef50_A6DKH4 UvrD/REP helicase n=1 Tax=Lentisphaera araneosa ... 338 6e-91 UniRef50_Q2S550 ATP-dependent DNA helicase pcrA n=2 Tax=Rhodothe... 337 7e-91 UniRef50_C7NAU4 UvrD/REP helicase n=5 Tax=Fusobacteriaceae RepID... 337 8e-91 UniRef50_C8WBZ1 UvrD/REP helicase n=7 Tax=Alphaproteobacteria Re... 337 8e-91 UniRef50_B4CU41 UvrD/REP helicase n=1 Tax=Chthoniobacter flavus ... 337 9e-91 UniRef50_C3QGR5 ATP-dependent DNA helicase n=23 Tax=Bacteroidale... 337 9e-91 UniRef50_B0RZV9 ATP-dependent DNA helicase n=2 Tax=Finegoldia ma... 337 1e-90 UniRef50_Q72IS0 DNA helicase uvrD n=3 Tax=Thermus thermophilus R... 337 1e-90 UniRef50_C9LR66 ATP-dependent DNA helicase PcrA n=1 Tax=Dialiste... 337 1e-90 UniRef50_B1GYW6 ATP-dependent UvrD family DNA helicase PcrA n=1 ... 337 1e-90 UniRef50_C0R0K3 ATP-dependent DNA helicase n=2 Tax=Brachyspira R... 337 1e-90 UniRef50_B9KXW3 ATP-dependent DNA helicase pcrA n=2 Tax=Thermomi... 336 1e-90 UniRef50_Q1DC55 ATP-dependent DNA helicase PcrA n=2 Tax=Cystobac... 336 2e-90 UniRef50_Q04T79 ATP-dependent DNA helicase n=6 Tax=Leptospira Re... 336 2e-90 UniRef50_B0MU18 Putative uncharacterized protein n=2 Tax=Bactero... 336 2e-90 UniRef50_A8SMG4 Putative uncharacterized protein n=1 Tax=Parvimo... 336 2e-90 UniRef50_D1CD72 UvrD/REP helicase n=1 Tax=Thermobaculum terrenum... 335 2e-90 UniRef50_C8S459 UvrD/REP helicase n=1 Tax=Rhodobacter sp. SW2 Re... 335 4e-90 UniRef50_C1A8M7 ATP-dependent DNA helicase n=1 Tax=Gemmatimonas ... 334 8e-90 UniRef50_B5YHS6 ATP-dependent DNA helicase PcrA n=1 Tax=Thermode... 333 1e-89 UniRef50_A0LDC5 ATP-dependent DNA helicase, Rep family n=1 Tax=M... 333 1e-89 UniRef50_Q83GZ5 ATP-dependent DNA helicase n=2 Tax=Tropheryma wh... 333 1e-89 UniRef50_B2UPY5 UvrD/REP helicase n=2 Tax=Verrucomicrobia RepID=... 332 3e-89 UniRef50_Q67KI7 ATP-dependent DNA helicase n=1 Tax=Symbiobacteri... 331 5e-89 UniRef50_Q2GE51 Helicase, UvrD/Rep family n=2 Tax=Neorickettsia ... 331 5e-89 UniRef50_D1PL59 ATP-dependent DNA helicase n=4 Tax=Ruminococcace... 331 5e-89 UniRef50_A7NGD4 UvrD/REP helicase n=11 Tax=Chloroflexi RepID=A7N... 331 7e-89 UniRef50_A1TNG2 ATP-dependent DNA helicase UvrD n=11 Tax=cellula... 330 9e-89 UniRef50_A1BEA2 ATP-dependent DNA helicase PcrA n=2 Tax=Chlorobi... 330 1e-88 UniRef50_A6VEA1 ATP-dependent DNA helicase Rep n=102 Tax=Proteob... 330 2e-88 UniRef50_C6NTI8 ATP-dependent DNA helicase UvrD/PcrA n=2 Tax=Gam... 330 2e-88 UniRef50_Q6MI36 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio ... 328 3e-88 UniRef50_B3QF13 UvrD/REP helicase n=9 Tax=Rhizobiales RepID=B3QF... 328 3e-88 UniRef50_A1WZS5 ATP-dependent DNA helicase UvrD n=3 Tax=Gammapro... 328 3e-88 UniRef50_UPI0001C37867 ATP-dependent DNA helicase PcrA n=1 Tax=R... 328 4e-88 UniRef50_D1NAY9 UvrD/REP helicase n=1 Tax=Victivallis vadensis A... 327 7e-88 UniRef50_D0LIZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum D... 327 1e-87 UniRef50_C5VHV2 ATP-dependent DNA helicase PcrA n=20 Tax=Bactero... 327 1e-87 UniRef50_Q0AHY9 ATP-dependent DNA helicase UvrD n=16 Tax=Betapro... 327 1e-87 UniRef50_D2R6Z4 UvrD/REP helicase n=4 Tax=Planctomycetaceae RepI... 326 1e-87 UniRef50_B5YF03 ATP-dependent DNA helicase PcrA n=2 Tax=Dictyogl... 326 2e-87 UniRef50_Q31JE9 ATP-dependent DNA helicase UvrD n=3 Tax=Gammapro... 326 2e-87 UniRef50_Q4FPM1 DNA helicase II n=5 Tax=Bacteria RepID=Q4FPM1_PELUB 325 3e-87 UniRef50_C1ZAM6 DNA/RNA helicase, superfamily I n=1 Tax=Planctom... 324 6e-87 UniRef50_Q5KJH7 ATP-dependent DNA helicase pcra, putative n=2 Ta... 324 7e-87 UniRef50_P44804 ATP-dependent DNA helicase rep n=275 Tax=Proteob... 323 9e-87 UniRef50_C3WE38 UvrD/REP helicase n=1 Tax=Fusobacterium mortifer... 323 1e-86 UniRef50_B2UQR8 UvrD/REP helicase n=2 Tax=Verrucomicrobiaceae Re... 322 2e-86 UniRef50_A9ETX5 ATP-depentend DNA helicase n=1 Tax=Sorangium cel... 322 3e-86 UniRef50_P75438 Probable DNA helicase MPN_340 n=1 Tax=Mycoplasma... 322 3e-86 UniRef50_A0M3U3 PcrA-like UvrD/Rep family ATP-dependent DNA heli... 322 4e-86 UniRef50_A6GG96 UvrD/REP helicase n=1 Tax=Plesiocystis pacifica ... 321 5e-86 UniRef50_P03018 DNA helicase II n=409 Tax=cellular organisms Rep... 321 7e-86 UniRef50_A6CC22 ATP-dependent DNA helicase n=1 Tax=Planctomyces ... 321 8e-86 UniRef50_A1AVZ1 UvrD/REP helicase n=3 Tax=Gammaproteobacteria Re... 320 1e-85 UniRef50_Q21PD1 ATP-dependent DNA helicase Rep n=15 Tax=Gammapro... 320 1e-85 UniRef50_C1TPS7 DNA/RNA helicase, superfamily I n=1 Tax=Dethiosu... 320 2e-85 UniRef50_C8WP33 UvrD/REP helicase n=3 Tax=Coriobacteriaceae RepI... 319 2e-85 UniRef50_C5TB61 UvrD/REP helicase n=3 Tax=cellular organisms Rep... 319 2e-85 UniRef50_Q68WT1 DNA helicase II n=17 Tax=Rickettsieae RepID=UVRD... 318 3e-85 UniRef50_D0RN21 ATP-dependent DNA helicase PcrA n=1 Tax=alpha pr... 318 4e-85 UniRef50_B1AJE0 ATP-dependent DNA helicase PcrA n=15 Tax=Ureapla... 318 4e-85 UniRef50_Q98PM4 ATP-DEPENDENT HELICASE PCRA n=1 Tax=Mycoplasma p... 318 4e-85 UniRef50_D2R5I6 UvrD/REP helicase n=1 Tax=Pirellula staleyi DSM ... 318 5e-85 UniRef50_Q1DAU6 ATP-dependent DNA helicase, UvrD/REP family n=6 ... 318 5e-85 UniRef50_A7Z3H2 YjcD n=3 Tax=Bacillus RepID=A7Z3H2_BACA2 318 6e-85 UniRef50_A7KV33 PcrA helicase n=1 Tax=Bacillus phage 0305phi8-36... 318 6e-85 UniRef50_Q67LG5 ATP-dependent DNA helicase n=1 Tax=Symbiobacteri... 317 7e-85 UniRef50_Q2BNY9 Helicase IV n=1 Tax=Neptuniibacter caesariensis ... 317 7e-85 UniRef50_B0TWY9 DNA helicase II n=19 Tax=Francisella RepID=B0TWY... 317 9e-85 UniRef50_C0R2D4 ATP-dependent DNA helicase n=4 Tax=Brachyspira R... 317 1e-84 UniRef50_C9RMS6 UvrD/REP helicase n=1 Tax=Fibrobacter succinogen... 317 1e-84 UniRef50_Q2STJ5 ATP-dependent DNA helicase Rep n=90 Tax=Bacteria... 317 1e-84 UniRef50_B2S250 Rep helicase, single-stranded DNA-dependent ATPa... 317 1e-84 UniRef50_C8PTM7 ATP-dependent DNA helicase PcrA n=1 Tax=Treponem... 317 1e-84 UniRef50_D2MPE9 Putative ATP-dependent helicase PcrA n=1 Tax=Bul... 316 2e-84 UniRef50_Q0EW02 DNA helicase II n=1 Tax=Mariprofundus ferrooxyda... 316 2e-84 UniRef50_D1R4U3 Putative uncharacterized protein n=1 Tax=Parachl... 316 2e-84 UniRef50_Q6MAS4 Probable ATP-dependent DNA helicase, mutU n=1 Ta... 315 4e-84 UniRef50_B0RZ36 ATP-dependent DNA helicase n=21 Tax=Bacteria Rep... 315 4e-84 UniRef50_A9M0G6 ATP-dependent DNA helicase n=38 Tax=Betaproteoba... 315 4e-84 UniRef50_O31626 Putative ATP-dependent DNA helicase yjcD n=3 Tax... 314 6e-84 UniRef50_D1J8P0 ATP-dependent helicase n=1 Tax=Mycoplasma homini... 314 6e-84 UniRef50_B2V7G3 UvrD/REP helicase n=5 Tax=Aquificales RepID=B2V7... 314 6e-84 UniRef50_C9M511 ATP-dependent DNA helicase PcrA n=2 Tax=Synergis... 313 1e-83 UniRef50_B9KCT9 ATP-dependent DNA helicase n=1 Tax=Campylobacter... 313 1e-83 UniRef50_B1XW04 UvrD/REP helicase n=41 Tax=Bacteria RepID=B1XW04... 313 1e-83 UniRef50_Q256I8 DNA/RNA helicase n=17 Tax=Chlamydiales RepID=Q25... 312 2e-83 UniRef50_B2A5W4 UvrD/REP helicase n=1 Tax=Natranaerobius thermop... 312 3e-83 UniRef50_A5TXQ2 Superfamily I ATP-dependent helicase n=15 Tax=Fu... 312 3e-83 UniRef50_B2RKD8 ATP-dependent DNA helicase n=5 Tax=Bacteroidetes... 312 4e-83 UniRef50_B0VGK7 Superfamily I DNA and RNA helicases n=1 Tax=Cand... 312 4e-83 UniRef50_Q6KHF5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma mo... 311 5e-83 UniRef50_A5IY88 ATP dependent helicase n=2 Tax=Mycoplasma RepID=... 310 8e-83 UniRef50_C0WAB3 ATP-dependent DNA helicase pcrA n=1 Tax=Acidamin... 310 9e-83 UniRef50_A5UVF1 ATP-dependent DNA helicase, Rep family n=6 Tax=C... 310 1e-82 UniRef50_A5WC18 UvrD/REP helicase n=2 Tax=Psychrobacter RepID=A5... 310 1e-82 UniRef50_C6HUX3 Putative ATP-dependent DNA helicase, UvrD/REP fa... 310 1e-82 UniRef50_D2MH56 Helicase IV n=1 Tax=Candidatus Poribacteria sp. ... 309 2e-82 UniRef50_UPI0000E87DAA UvrD/REP helicase n=1 Tax=Methylophilales... 309 2e-82 UniRef50_A0LVT3 UvrD/REP helicase n=1 Tax=Acidothermus celluloly... 309 2e-82 UniRef50_Q018Z5 ATP-dependent DNA helicase (ISS) n=1 Tax=Ostreoc... 309 3e-82 UniRef50_B2S4R5 DNA helicase II n=3 Tax=Treponema RepID=B2S4R5_T... 308 4e-82 UniRef50_Q600N7 ATP-dependent DNA helicase n=6 Tax=Mycoplasma Re... 308 4e-82 UniRef50_C3JBX6 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria... 308 4e-82 UniRef50_Q123W9 UvrD/REP helicase n=16 Tax=cellular organisms Re... 308 4e-82 UniRef50_B9NSL7 UvrD/REP helicase n=1 Tax=Rhodobacteraceae bacte... 308 5e-82 UniRef50_Q4PDX2 Putative uncharacterized protein n=1 Tax=Ustilag... 308 5e-82 UniRef50_B0SSS8 ATP-dependent DNA helicase PcrA n=6 Tax=Leptospi... 308 6e-82 UniRef50_Q6AJ72 Probable ATP-dependent DNA helicase, UvrD/REP fa... 307 7e-82 UniRef50_Q8EUN0 ATP-dependent DNA helicase n=1 Tax=Mycoplasma pe... 307 9e-82 UniRef50_D1B9M8 UvrD/REP helicase n=1 Tax=Thermanaerovibrio acid... 306 2e-81 UniRef50_P45612 Probable DNA helicase II homolog n=4 Tax=Mollicu... 306 2e-81 UniRef50_Q0SMP9 Rep helicase, single-stranded DNA-dependent ATPa... 306 2e-81 UniRef50_C6NVE2 ATP-dependent DNA helicase Rep n=1 Tax=Acidithio... 305 3e-81 UniRef50_A7HBX8 UvrD/REP helicase n=7 Tax=Cystobacterineae RepID... 305 3e-81 UniRef50_Q3F0Y3 ATP-dependent DNA helicase pcrA n=2 Tax=Bacillus... 305 3e-81 UniRef50_C3RQ43 ATP-dependent DNA helicase n=4 Tax=Bacteria RepI... 305 3e-81 UniRef50_B0DAK6 Predicted protein n=1 Tax=Laccaria bicolor S238N... 305 4e-81 UniRef50_C5BBB0 ATP-dependent DNA helicase Rep, putative n=2 Tax... 305 5e-81 UniRef50_C2KQX4 Possible UvrD/REP helicase n=3 Tax=Mobiluncus Re... 305 5e-81 UniRef50_B3PNG5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma ar... 305 5e-81 UniRef50_Q2RLV0 UvrD/REP helicase n=2 Tax=cellular organisms Rep... 304 6e-81 UniRef50_P57654 ATP-dependent DNA helicase rep n=4 Tax=Buchnera ... 304 7e-81 UniRef50_Q5WF16 UvrD/REP family ATP-dependent DNA helicase n=1 T... 304 9e-81 UniRef50_Q6MND7 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio ... 303 1e-80 UniRef50_B9XNK2 UvrD/REP helicase n=2 Tax=Verrucomicrobiales Rep... 303 1e-80 UniRef50_B0KVA6 Putative UvrD/REP helicase n=1 Tax=uncultured ca... 303 1e-80 UniRef50_A4IYZ2 ATP-dependent DNA helicase/UvrD/REP helicase n=2... 303 1e-80 UniRef50_B8FB90 UvrD/REP helicase n=1 Tax=Desulfatibacillum alke... 303 2e-80 UniRef50_C1E652 ATP-dependent DNA helicase n=2 Tax=Micromonas Re... 303 2e-80 UniRef50_C6XGC2 DNA helicase II n=1 Tax=Candidatus Liberibacter ... 301 4e-80 UniRef50_UPI0001C42BC3 ATP-dependent DNA helicase n=1 Tax=Bacill... 301 5e-80 UniRef50_B3DUG1 ATP-dependent DNA helicase UvrD/PcrA n=1 Tax=Met... 301 7e-80 UniRef50_Q30TG3 UvrD/REP helicase n=8 Tax=Epsilonproteobacteria ... 300 8e-80 UniRef50_C7M335 UvrD/REP helicase n=1 Tax=Acidimicrobium ferroox... 300 1e-79 UniRef50_B7IZB5 Helicase, UvrD/Rep family n=5 Tax=Bacillus cereu... 299 2e-79 UniRef50_C6HZQ0 UvrD/REP helicase n=3 Tax=Leptospirillum RepID=C... 299 2e-79 UniRef50_Q481U8 Helicase IV n=1 Tax=Colwellia psychrerythraea 34... 299 3e-79 UniRef50_A9NHW3 DNA helicase II n=1 Tax=Acholeplasma laidlawii P... 299 3e-79 UniRef50_C3LBP3 ATP-dependent DNA helicase, UvrD/REP family n=82... 299 3e-79 UniRef50_A4WTK0 UvrD/REP helicase n=8 Tax=Rhodobacterales RepID=... 298 4e-79 UniRef50_D0JAI1 ATP-dependent DNA helicase n=2 Tax=Blattabacteri... 297 9e-79 Sequences not found previously or not previously below threshold: UniRef50_C7M3I8 UvrD/REP helicase n=3 Tax=Bacteroidetes RepID=C7... 332 2e-89 UniRef50_A6NZ65 Putative uncharacterized protein n=1 Tax=Bactero... 332 3e-89 UniRef50_D2RIV6 ATP-dependent DNA helicase PcrA n=6 Tax=Veillone... 323 1e-86 UniRef50_Q0AZZ6 ATP-dependent DNA helicase PcrA n=1 Tax=Syntroph... 316 1e-84 UniRef50_D2RA55 UvrD/REP helicase n=1 Tax=Gardnerella vaginalis ... 314 6e-84 UniRef50_Q6XYV7 ATP-dependent DNA helicase n=2 Tax=Spiroplasma R... 313 2e-83 UniRef50_Q7UIR9 ATP-dependent DNA helicase n=2 Tax=Planctomyceta... 312 2e-83 UniRef50_A8R903 Putative uncharacterized protein n=2 Tax=Erysipe... 308 4e-82 UniRef50_B7C8B0 Putative uncharacterized protein n=1 Tax=Eubacte... 307 1e-81 UniRef50_C1ZKV9 DNA/RNA helicase, superfamily I n=1 Tax=Planctom... 307 1e-81 UniRef50_B2IL96 UvrD/REP helicase n=1 Tax=Beijerinckia indica su... 305 4e-81 UniRef50_C9RM93 UvrD/REP helicase n=1 Tax=Fibrobacter succinogen... 303 2e-80 UniRef50_C9RKG0 UvrD/REP helicase n=1 Tax=Fibrobacter succinogen... 301 8e-80 UniRef50_C8P127 ATP-dependent DNA helicase PcrA n=1 Tax=Erysipel... 298 6e-79 UniRef50_C2ME74 ATP-dependent DNA helicase PcrA n=1 Tax=Porphyro... 297 9e-79 UniRef50_A8Q3F1 Putative uncharacterized protein n=1 Tax=Malasse... 297 1e-78 >UniRef50_P15038 Helicase IV n=169 Tax=cellular organisms RepID=HELD_ECOLI Length = 684 Score = 902 bits (2330), Expect = 0.0, Method: Composition-based stats. Identities = 684/684 (100%), Positives = 684/684 (100%) Query: 1 MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLAIHCKRGLVWGELEFV 60 MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLAIHCKRGLVWGELEFV Sbjct: 1 MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLAIHCKRGLVWGELEFV 60 Query: 61 LPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENKWL 120 LPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENKWL Sbjct: 61 LPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENKWL 120 Query: 121 TREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEA 180 TREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEA Sbjct: 121 TREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEA 180 Query: 181 MLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEAS 240 MLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEAS Sbjct: 181 MLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEAS 240 Query: 241 PEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDT 300 PEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDT Sbjct: 241 PEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDT 300 Query: 301 AARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWV 360 AARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWV Sbjct: 301 AARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWV 360 Query: 361 SLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIV 420 SLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIV Sbjct: 361 SLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIV 420 Query: 421 ILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQM 480 ILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQM Sbjct: 421 ILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQM 480 Query: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL 540 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL Sbjct: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL 540 Query: 541 LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQ 600 LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQ Sbjct: 541 LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQ 600 Query: 601 QADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWAL 660 QADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWAL Sbjct: 601 QADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWAL 660 Query: 661 FNKENPSPFVEILKNLDVPVARKP 684 FNKENPSPFVEILKNLDVPVARKP Sbjct: 661 FNKENPSPFVEILKNLDVPVARKP 684 >UniRef50_A9ZEX9 Helicase IV (75 kDa helicase) n=15 Tax=Enterobacteriaceae RepID=A9ZEX9_YERPE Length = 661 Score = 758 bits (1957), Expect = 0.0, Method: Composition-based stats. Identities = 456/684 (66%), Positives = 543/684 (79%), Gaps = 23/684 (3%) Query: 1 MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLAIHCKRGLVWGELEFV 60 MELKAT+ GK L+QHPY+R +LNAGI+V GD+H+YLIPFNQL++I CKRG+VWGELEF Sbjct: 1 MELKATSFGKHLSQHPYNRVRLLNAGIEVCGDKHQYLIPFNQLVSIQCKRGIVWGELEFE 60 Query: 61 LPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENKWL 120 LP +KVVRLHGTEW ETQ FYH+L W++WS EMS++ + VL +Q++ I ++KW Sbjct: 61 LPQQKVVRLHGTEWQETQHFYHYLLGVWQQWSEEMSQVCAEVLHKQVESIKRIEQQDKWF 120 Query: 121 TREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEA 180 R + +Q IR+A SALP+PV RL F++CR + C WL+ + + NQ +T Sbjct: 121 KRSELGQIQVMIREAFSALPMPVERLAAFESCRADYECCLRWLQQGRHSVERCNQQWTAR 180 Query: 181 MLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEAS 240 ML EY DFF+ VE+SPLN +Q+RAVVNGE S+LVLAGAGSGKTSVLVARAGWLL R EA Sbjct: 181 MLEEYQDFFQNVETSPLNASQSRAVVNGEDSVLVLAGAGSGKTSVLVARAGWLLRRNEAL 240 Query: 241 PEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDT 300 PEQILLLAFGR+AA+EM+ RI++RL + I A+TFHALALHIIQQGS+K P++SKLE+D+ Sbjct: 241 PEQILLLAFGRQAADEMNSRIKQRLGVDSIQAKTFHALALHIIQQGSRKTPVISKLESDS 300 Query: 301 AARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWV 360 AR L I W++QCSEKKAQ D++L RLASRL+RWV Sbjct: 301 QARRALLIQHWQQQCSEKKAQ-----------------------DKRLAARLASRLERWV 337 Query: 361 SLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIV 420 LMRM+GG+QAEMI A +E+RDLF KRI+LMAPLLKAWK ALK E AVDFSGLIHQA+ Sbjct: 338 GLMRMYGGSQAEMIEQANDEVRDLFQKRIRLMAPLLKAWKTALKDEGAVDFSGLIHQAVN 397 Query: 421 ILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQM 480 +LEKGRF+SPWKH+LVDEFQDISPQRA LLAALRKQN QT LFAVGDDWQAIYRFSGA++ Sbjct: 398 LLEKGRFVSPWKHVLVDEFQDISPQRAMLLAALRKQNKQTCLFAVGDDWQAIYRFSGAEL 457 Query: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL 540 SLTTAF E+FGEG C LDTTYRFN RIG++ANRFIQQNP QLKKPLNSL+ G+KK+V + Sbjct: 458 SLTTAFSEHFGEGAECALDTTYRFNDRIGDIANRFIQQNPYQLKKPLNSLSKGNKKSVMI 517 Query: 541 LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQ 600 L + QL+ALLDKLSG+ K ERILILARYHH+RP L+KAATRWPKL IDFMTIHASKGQ Sbjct: 518 LPDEQLEALLDKLSGFVKDGERILILARYHHLRPEVLQKAATRWPKLTIDFMTIHASKGQ 577 Query: 601 QADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWAL 660 QADYVIIVGL EG+DGFPAAARES++E+ LLPP EDFPDAEERRL+YVA+TRA+H+VW L Sbjct: 578 QADYVIIVGLHEGNDGFPAAARESVLEDVLLPPPEDFPDAEERRLLYVAITRAKHQVWLL 637 Query: 661 FNKENPSPFVEILKNLDVPVARKP 684 + PS FV L L V RKP Sbjct: 638 QDTARPSIFVSQLSELGALVQRKP 661 >UniRef50_Q6LST7 Hypothetical helicase IV n=5 Tax=Gammaproteobacteria RepID=Q6LST7_PHOPR Length = 694 Score = 649 bits (1674), Expect = 0.0, Method: Composition-based stats. Identities = 251/693 (36%), Positives = 375/693 (54%), Gaps = 16/693 (2%) Query: 1 MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLA-IHCKRGLVWGELEF 59 M L A+ L + Q Y + + + I F+ I RG+VWG LE Sbjct: 1 MRLSASVLAQWFVQGDYFSIELNEHSLTLDSQTETSTISFDDWDGAIEVHRGVVWGSLEL 60 Query: 60 VLPDEKVV-RLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENK 118 D++ +HG W + + F L +R W+ + L L+ I + + Sbjct: 61 TSADQQYCWTIHGLPWQQCKPFAARLLESYRDWAHGRVDRLDKALPDVLNRINSFATQQG 120 Query: 119 WLTREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYT 178 +L + + + + +L L F A+ + + WL+ ++N+ + Sbjct: 121 YLRESEHDNLCKFLDDSLKTTGLTPELAASFRPM--AFERIEPWLEGNGDWVEENNREWL 178 Query: 179 EAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGE 238 + +++ +F + E+SPLN +Q AV+ + LVLAGAG+GKTSVLVARAG+L+A Sbjct: 179 TSEAEKWSSWFDKFETSPLNSSQREAVLINQDHNLVLAGAGTGKTSVLVARAGYLVANQA 238 Query: 239 ASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLEN 298 A PE+IL+LAFGR AAEEM ER+ +++ I TFHAL IIQ + P VS L Sbjct: 239 AQPEEILMLAFGRNAAEEMRERLALKVN-NRIKVATFHALGTQIIQSVENERPNVSPLAL 297 Query: 299 DTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDR 358 D A+ + +I K+ E A AK W++ LT+ N + + +LAS + R Sbjct: 298 DDKAKAQ-WITSTLKEQWESAASAKRWQKHLTQWRIPGFKADNSMEQQAKNEQLASWVWR 356 Query: 359 WVSLMRMHGGAQAEMIASAPEEIRDLFSKRIK----LMAPLLKAWKGALKAENAVDFSGL 414 + L+ G ++++++A + +R+K L+ P +A++ LK+ +DF+ + Sbjct: 357 HIELIGQSGLSKSDLVAIIDKSNNPATKQRMKSELGLLWPCFRAYEQHLKSNKQIDFNTM 416 Query: 415 IHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQN----SQTTLFAVGDDWQ 470 I +A+ + G+F+ W+ I+VDE+QDISPQR +L+ AL + + TLFAVGDDWQ Sbjct: 417 IQKAVEYVNDGKFVPEWRFIMVDEYQDISPQRLSLIEALCRSEEETKPRPTLFAVGDDWQ 476 Query: 471 AIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSL 530 AIYRF+GA ++LTT F + FG +LDTTYRFNS IGEVAN FIQQNP QL+K L S Sbjct: 477 AIYRFAGADVNLTTGFADRFGSSHITELDTTYRFNSMIGEVANTFIQQNPQQLRKDLTSH 536 Query: 531 TNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQID 590 +KAVTLL + L+ L +L+ + +L+L R + RP L+ T+WP+L + Sbjct: 537 KKQKRKAVTLLCQDLLEQELVQLASQNEKPVTVLLLGRNNKQRPEKLKAWQTQWPQLNMT 596 Query: 591 FMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVAL 650 FMT H SKG++AD+V I+ + G FPA RE+ + L E + DAEERRL YVAL Sbjct: 597 FMTCHGSKGREADFVFILDVNRGV--FPAPERETGLAACLQSKNEGYADAEERRLFYVAL 654 Query: 651 TRARHRVWALFNKENPSPFVEILKNLDVPVARK 683 TRA+ VW + E S FV L + V K Sbjct: 655 TRAKKHVWVCADPEKTSSFVNELIDDKYAVMNK 687 >UniRef50_D0YXK5 DNA helicase IV n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0YXK5_LISDA Length = 701 Score = 647 bits (1668), Expect = 0.0, Method: Composition-based stats. Identities = 256/695 (36%), Positives = 375/695 (53%), Gaps = 18/695 (2%) Query: 1 MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLA-IHCKRGLVWGELEF 59 M+L A+ L + L Q Y + + + + I F+ I RG++WG LE Sbjct: 7 MQLSASRLAQWLVQGDYYSIELQDNRLVLESQTETDEISFDDWDGSIDVHRGVMWGTLEL 66 Query: 60 VLPDEKVV-RLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENK 118 D+K +HG W E + F L ++ W+ L + L I TG+ Sbjct: 67 TSSDQKYCWTVHGLPWRECKPFAQDLVQTYQNWAHARVAKLDAALPEMLKRIHAFTGQKG 126 Query: 119 WLTREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYT 178 +L + + Q + +L L F +A+ WL D + +HN+ + Sbjct: 127 YLRDSEHDDLYQLLTSSLEHSELTPELAASFRP--KAFEHILPWLGDNDVWVDEHNKKWI 184 Query: 179 EAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGE 238 E ++ +F ESSPLNP+Q AV+ + LVLAGAGSGKTSVLVARAG+L+A + Sbjct: 185 EKESNKWGSWFDSFESSPLNPSQREAVLINQDHNLVLAGAGSGKTSVLVARAGYLIASQK 244 Query: 239 ASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLEN 298 A PE+IL+LAFGR A+EEM+ R+R ++ ++ + TFH+L II+Q + P VS + Sbjct: 245 ALPEEILMLAFGRMASEEMNARMRTKV-SDRVKVATFHSLGTEIIRQVEHERPNVSPIAL 303 Query: 299 DTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDR 358 D AR +IA + K A AK W++ LT+ + N + + + + + R Sbjct: 304 DDKAR-SAWIARMLMEQWNKPASAKRWQRHLTQWRIPGFSKENSMEQQAENEQTINWIWR 362 Query: 359 WVSLMRMHGGAQAEMI----ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGL 414 + L+ G + +++ S+ +R ++L+ P +A++ LK + +DF+ + Sbjct: 363 HIELLGQRGATKEQLLNDIQDSSNPAMRPRMKSELELLWPCYEAYQQHLKVKKQIDFNSM 422 Query: 415 IHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQ-----TTLFAVGDDW 469 I A +++G+FISPW+ ++VDE+QDISP R +L+ AL + TLFAVGDDW Sbjct: 423 IKVATQYVKEGKFISPWRFVMVDEYQDISPLRLSLIEALCQPQPNSDKAAPTLFAVGDDW 482 Query: 470 QAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS 529 QAIYRF+G+ ++LTT F E FG L TTYRFN+ IG+VAN F+QQNP Q+KK L S Sbjct: 483 QAIYRFAGSDVNLTTDFEERFGATHITQLSTTYRFNNMIGDVANVFVQQNPMQVKKELTS 542 Query: 530 LTNGDKKAVTLLDESQLDALLDKL-SGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 KKAVTLL + + L +L Y + +LIL R + RPA LE +WP+L Sbjct: 543 FKKQKKKAVTLLAQDFILQELGQLAKRYEGKQTNVLILGRNNKQRPAKLEAWQEQWPQLN 602 Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + +MT HASKGQ+A YV IV + +G FP RE+ + L E + DAEERRL YV Sbjct: 603 LQYMTCHASKGQEAQYVFIVDVNKGI--FPTLDRETGLASILQSRAETYADAEERRLFYV 660 Query: 649 ALTRARHRVWALFNKENPSPFVEILKNLDVPVARK 683 ALTRA+ V+ N N SPF+ L PV K Sbjct: 661 ALTRAKKHVYVCANPMNVSPFINELIEDKYPVDNK 695 >UniRef50_A5EZU3 Helicase IV n=56 Tax=Vibrionales RepID=A5EZU3_VIBC3 Length = 699 Score = 610 bits (1573), Expect = e-173, Method: Composition-based stats. Identities = 256/693 (36%), Positives = 372/693 (53%), Gaps = 17/693 (2%) Query: 1 MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLA-IHCKRGLVWGELEF 59 M+L A + + Y + + + ++ E IPF+ + +RG+ WG L+F Sbjct: 13 MQLNANKTAQFFIANEYYQVQLEKEWLVLTSLSSEERIPFHVWNGEVQIRRGVFWGTLQF 72 Query: 60 VL-PDEKVVR---LHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTG 115 P+E V R + G W E + F H L AH++ W E S + ++ Sbjct: 73 FAHPEEGVQRSWLVQGLPWPECRHFAHQLVAHYQAWHNRQCEQLSLYFPRWQQELSRLKR 132 Query: 116 ENKWLTREQTSGVQQQIRQALSALPLPVNRLEEFD-NCREAWRKCQAWLKDIESARLQHN 174 +L+ V+ + Q + L L L E + + WL D + + N Sbjct: 133 LPSFLSHS---SVEAWVAQVYADLKLMDMTLHEAQKHLPTVFDTLLPWLLDTSATLYERN 189 Query: 175 QAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLL 234 +A+ E + F Q ESSPLN +Q AV+ + LVLAGAGSGKTSVL AR +LL Sbjct: 190 KAWLEIERANWTVLFSQCESSPLNVSQQYAVLLNDDHNLVLAGAGSGKTSVLTARVSYLL 249 Query: 235 ARGEASPEQILLLAFGRKAAEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPI 292 A PEQILL+AF R AA+EM ER++ ++ E + TFH L L II + K I Sbjct: 250 QSHLAKPEQILLVAFARDAAQEMAERLKNKIGLEAERLHINTFHQLGLRIINRVEGKTVI 309 Query: 293 VSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRL 352 +S L ND+ + I +W K+ K W++ L + + + +L Sbjct: 310 MSPLANDSKLKQAWCI-DWLKRHWMTPTNFKRWQKHLAKWPIAYLAGDDELGSHVENPKL 368 Query: 353 ASRLDRWVSLMRMHGGAQAEMIASA-PEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDF 411 + L++ + + G ++ E+ + + + L P +AW+ LK +N +DF Sbjct: 369 IAWLEKQLDQLAQMGLSKKELQERLVDHDDYPRLNSELSLCWPCYQAWQQMLKDQNQIDF 428 Query: 412 SGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQN-SQTTLFAVGDDWQ 470 + +I +A +EKG+F SPWK I+VDE+QDISPQR LL AL +QN Q LFAVGDDWQ Sbjct: 429 NIMITRATEYVEKGKFRSPWKFIMVDEYQDISPQRLRLLQALCEQNQGQCNLFAVGDDWQ 488 Query: 471 AIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSL 530 +IY+F+G+ + LTT F F LDTTYRFN +IG VANRFIQQNP QL K LNS Sbjct: 489 SIYQFAGSDVDLTTGFASRFAHSTVHHLDTTYRFNDQIGAVANRFIQQNPHQLPKTLNSF 548 Query: 531 TNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQID 590 +KAV L ++ +LD+++ + +L+L R H+ +P L+ R+ L++D Sbjct: 549 KTQKQKAVMLAPNHSVEKILDEINRSTNKLKTVLLLGRNHYHKPELLKDWQNRYLSLKLD 608 Query: 591 FMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVAL 650 FMT HASKG++ADYVII+ + EG FPA + +++AL +DFP AEERRL YVAL Sbjct: 609 FMTCHASKGKEADYVIILAVDEGQ--FPARVKALHLDDALNQSEDDFPYAEERRLFYVAL 666 Query: 651 TRARHRVWALFNKENPSPFVEILKNLDVPVARK 683 TRA+ +VW +N N S FV+ L N D PV ++ Sbjct: 667 TRAKEKVWVTYNG-NGSSFVQELLNDDYPVVKQ 698 >UniRef50_Q5E4C9 DNA helicase IV n=3 Tax=Aliivibrio RepID=Q5E4C9_VIBF1 Length = 687 Score = 597 bits (1540), Expect = e-169, Method: Composition-based stats. Identities = 243/692 (35%), Positives = 375/692 (54%), Gaps = 20/692 (2%) Query: 1 MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLA-IHCKRGLVWGELEF 59 M++KAT + L Q + + + + + +++ +PF++ + +RGL+WG L F Sbjct: 1 MQIKATPFAQWLVQGDFYQLELEQEQLLFTSHKYQVSVPFDKWSGKVTFERGLIWGALCF 60 Query: 60 VLPDEKVV-RLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENK 118 +E+V R+ G W E + + + W + + + Q ++LI + + Sbjct: 61 YNRNEQVAWRVSGLPWEECDAIINAVLNAYADWKESKVLLLNQLQPQMIELIENFSANKR 120 Query: 119 WLTREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYT 178 +L + + + +++ + + E+ A WL + E N + Sbjct: 121 FLKQTEALMMVEKLYDLFEQTKISIPLAEQLQPDCIA--PVIDWLTEPEEQLKVLNDNWL 178 Query: 179 EAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGE 238 E E+ FF + ES PLN +Q A++ E LVLAGAGSGKTSVLVAR +L+ G+ Sbjct: 179 EEQKVEWKTFFSECESQPLNESQQSALLLNEDHTLVLAGAGSGKTSVLVARVNYLIQSGQ 238 Query: 239 ASPEQILLLAFGRKAAEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSK 295 A ++ILLLAFGR+AA+EM RI ++L + + TFH L L II+ + P +S Sbjct: 239 AQADEILLLAFGRQAAQEMSGRIIDKLGFEIGQRVKVATFHQLGLDIIRHVEYQQPKLSC 298 Query: 296 LENDTAARHELFIAEWR---KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRL 352 L D AR E F+ K + K ++W ++ V +EKLQ L Sbjct: 299 LVTDVKARKEWFVHVLDSEWKNATAMNRWKKHLKKWPIAYLRGDVDLREESHNEKLQEWL 358 Query: 353 ASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFS 412 ++ + SL ++ + E I P+ R + ++ P KA++ LK E+A+D+ Sbjct: 359 YKQICQLNSL-QLDKKSIVEKIEFHPDVQR--LKSELNIVWPFFKAYERTLKHEDAIDYE 415 Query: 413 GLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALR----KQNSQTTLFAVGDD 468 +I +A + ++ PW ++VDE+QDISPQR L+ A+ K ++ TLFAVGDD Sbjct: 416 SMITKAKAYIADNKYELPWSFVMVDEYQDISPQRLDLIEAICHTENKHQTKATLFAVGDD 475 Query: 469 WQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLN 528 WQAIYRF+GA +SLTT F F + L TTYRFN +IG VANRF+Q+NP QLKK LN Sbjct: 476 WQAIYRFAGADVSLTTGFEHRFQSTQIAHLSTTYRFNDQIGAVANRFVQENPMQLKKELN 535 Query: 529 SLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 S T +KAV +++ ++ L LS + E+++IL R H+ +P S ++ +P L Sbjct: 536 SFTKKKRKAVKVIEHQSIEKELLSLSKNIRDGEKVVILGRNHNHKPDSFDEWVKFYPGLN 595 Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 +++ T HASKG +ADYV IV + +G FP R ++ ALLP E FP AEERRL YV Sbjct: 596 LEYNTCHASKGTEADYVFIVEMTDGQ--FPMKERAESLDTALLPHAESFPYAEERRLFYV 653 Query: 649 ALTRARHRVWALFNKENPSPFVEILKNLDVPV 680 ALTRA+ +VW +++ PSPFV+ + + D PV Sbjct: 654 ALTRAKKKVWIVYHG-KPSPFVQEIVDKDYPV 684 >UniRef50_D0IB53 DNA helicase IV n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0IB53_VIBHO Length = 694 Score = 588 bits (1515), Expect = e-166, Method: Composition-based stats. Identities = 252/696 (36%), Positives = 366/696 (52%), Gaps = 24/696 (3%) Query: 1 MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLA-IHCKRGLVWGELEF 59 M+L A+ L + Q + V+ + +PF+ RGLVWG L F Sbjct: 1 MKLSASNLAQWFVQGAHYSIVLDEEQLVFESKHMTETVPFSIWDGQCRVSRGLVWGRLTF 60 Query: 60 V-LPDEKVVR---LHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTG 115 V P ++ R ++G W + + + ++ W G+ V + + L Sbjct: 61 VVSPADQPARTLTVYGLPWRKVHAYAGKVTEQYQCWLGKQQSKFMLVEHELVALRDVLRD 120 Query: 116 ENKWLTREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQ 175 +L E QQ+ R+ + + + ++ WL++ E+ R N Sbjct: 121 HRGYLRVEDLKAWQQKAREVFERCNIHPQVMATANPSL--YQALYGWLQNGEAQRAARNA 178 Query: 176 AYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLA 235 + + L ++ +F VE+SPLN +Q +AV+ ++ L+LAGAGSGKTSVL+ARA +L+A Sbjct: 179 QWCDGELERWSGWFDGVEASPLNASQRQAVLMDDNHNLLLAGAGSGKTSVLMARAQYLVA 238 Query: 236 RGEASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSK 295 + P +IL+LAFG+KA+EEM R+ E+ + TFHA AL +I++ S + V+ Sbjct: 239 SQQTEPSRILMLAFGKKASEEMAGRL-EKAGLHGVETSTFHAFALKVIREISGQEAKVAP 297 Query: 296 LENDTAARHE---LFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRL 352 L D A+H L++AE Q + +K K QW + P D KLQ L Sbjct: 298 LATDEEAKHSWLTLWLAENLAQPAVEKRWLKHLEQWSVPGLTRERPLVEQAHDGKLQTWL 357 Query: 353 ASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFS 412 LD V + +A + E L+ P+LK + ALK + A DF+ Sbjct: 358 WRHLDLLVQQSQPATAIRAVIKGDEKAE------SEFALVQPVLKGYLNALKEQKAQDFN 411 Query: 413 GLIHQAIVILEKGR--FISPWKHILVDEFQDISPQRAALLAALR--KQNSQTTLFAVGDD 468 GLI +A +L K F + + HI+VDE+QDISP R ALL AL K+N +LFAVGDD Sbjct: 412 GLIREATKLLSKKSETFGARYDHIMVDEYQDISPARLALLEALCGGKRNRAPSLFAVGDD 471 Query: 469 WQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLN 528 WQAIYRF+G+ +SLTT F F G LDTTYRFNS+IGEVANRFIQ +P QL KPLN Sbjct: 472 WQAIYRFAGSDVSLTTGFMNRFPAGVIRYLDTTYRFNSQIGEVANRFIQVDPQQLNKPLN 531 Query: 529 SLTNGDKKAVTLLDESQLDALLDKLSGY-AKPEERILILARYHHMRPASLEKAATRWPKL 587 S KKAV L+ +D++L+KL+ +L++ R + RP+ LE+ +P L Sbjct: 532 SQRIQKKKAVHLMPSEAIDSVLEKLAKSAGDKGASVLLIGRNNANRPSRLEEWQQGYPSL 591 Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 + ++T HASKG +AD+ +++ + EG FPA + +E ALL + AEERRL Y Sbjct: 592 SVTYVTAHASKGLEADFTLLLDVNEGV--FPARSATEGLEAALLKVDGEMEHAEERRLFY 649 Query: 648 VALTRARHRVWALFNKENPSPFVEILKNLDVPVARK 683 VALTRA+H W + E PS FV+ L PV K Sbjct: 650 VALTRAKHECWIFADPEKPSVFVKELWQGSYPVTSK 685 >UniRef50_C4LER9 UvrD/REP helicase n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LER9_TOLAT Length = 698 Score = 577 bits (1488), Expect = e-163, Method: Composition-based stats. Identities = 230/700 (32%), Positives = 359/700 (51%), Gaps = 32/700 (4%) Query: 2 ELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLAI-HCKRGLVWGELEFV 60 E+K L L +HP + + G+++S + + ++PF+++ ++ KR L W L V Sbjct: 5 EIKNNWLTNLLFRHPASVLTLQSKGLQISDGKKKMVLPFSRMSSLPKIKRRLFWSHLS-V 63 Query: 61 LPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENKWL 120 +K G + ++F L+ + + + +Q I T + + Sbjct: 64 TTAKKSYLYKGFSASQLRQFSELLNDSLKLHVQQQLQAEYQEAKQLKTEIQTFLDASSFR 123 Query: 121 TREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEA 180 Q + ++ R+ L + + + A + ++ E + N + + Sbjct: 124 RSSQCRHLVERCRRLLKNTSVYLRECFATSSQLAALKYSADFVSFAEEKVKRANTKFLKQ 183 Query: 181 MLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEAS 240 L FF +E + L AQ +A + E LVLAGAG+GKTS ++ RAG+LL +A Sbjct: 184 ELLRCQSFFDHIEKNTLTLAQRKACIINEDHNLVLAGAGTGKTSTMIGRAGYLLVTAQAQ 243 Query: 241 PEQILLLAFGRKAAEEMDER----IRERLHTEDITARTFHALALHIIQQGSKKVPIVSKL 296 PE+IL+LAF +KAA EM ER +R L +TFHAL L II + K P+++ Sbjct: 244 PEKILMLAFAKKAAGEMQERQDKCLRPLLKNATPVIKTFHALGLEIIGKVEGKWPVITPF 303 Query: 297 ENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRL 356 + AA + FI + Q +A K Q+ T+ K + + Sbjct: 304 VENNAAFMQ-FIGDVIGQLMMNEAYKKKVSQFCTDRAY-----------PKSAADFSLLI 351 Query: 357 DRWVSLMRMHGGAQAEMIASAPEEIRDL-FSKRIKLMAPLLKAWKGALKAENAVDFSGLI 415 ++ L + ++ + FS + L P+L A++ L N +DF+ +I Sbjct: 352 ADFLLLFKQSHLTFPAFATDIKKQRSSVRFSLFLSLFQPVLAAYEQHLTERNEIDFADMI 411 Query: 416 HQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRF 475 +AI +E GR+ SP++HILVDEFQDIS +RA LL AL Q T LFAVGDDWQ+IYRF Sbjct: 412 GKAIEYVESGRYCSPYQHILVDEFQDISQERARLLKALLAQRDDTVLFAVGDDWQSIYRF 471 Query: 476 SGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDK 535 +G+ +++T F FG LDTT+RFN++IGEVA+ F+ +NP Q+ K +NS + Sbjct: 472 TGSDINITRQFESIFGATATTALDTTFRFNNKIGEVASGFVLKNPEQINKTINSASIVAH 531 Query: 536 KAVTLLD----ESQLDALLDKLSG----YAKPEERILILARYHH----MRPASLEKAAT- 582 AV+L+ E L +L L+ Y++ + + +LAR++ P L++ Sbjct: 532 PAVSLVQASVSERGLHQVLHHLNQDVPVYSEQKTSVAVLARFNFLLGDDSPVILKRQMEF 591 Query: 583 RWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEE 642 ++P L I+FM++HASKG++ADYVI +G+ G GFP+ + E LLP E F AEE Sbjct: 592 QYPYLDIEFMSVHASKGKEADYVIALGMNNGKYGFPSLKETDPILEFLLPEKETFSYAEE 651 Query: 643 RRLMYVALTRARHRVWALFNKENPSPFVEILKNLDVPVAR 682 RRL YVALTRARHRV+ +++ PSPF+ L N PV Sbjct: 652 RRLFYVALTRARHRVYLVYHPAEPSPFISELINQKYPVCT 691 >UniRef50_A6FAM2 Hypothetical helicase IV n=1 Tax=Moritella sp. PE36 RepID=A6FAM2_9GAMM Length = 730 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 229/738 (31%), Positives = 347/738 (47%), Gaps = 84/738 (11%) Query: 6 TTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLAIHCK----RGLVWGELEFVL 61 +T + L + G + + I + RG + L V Sbjct: 12 STFAQLLGAN-CRTLSFRPEGAVFT--TKQQQIYHYTWATFEPRLKHYRGSFFDTL-VVS 67 Query: 62 PDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATR--TGENKW 119 + + VRL+G E L ++ +G+ ++I L QQL + R +KW Sbjct: 68 WENQRVRLNGIAKAEVAGLIDDL--YFYALTGKEADILE--LYQQLTQVIERGYIPYSKW 123 Query: 120 LTREQTSG-------VQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQ 172 + + + +I + +AL LP+ RL W++ Q D + Sbjct: 124 IFLQTQLAPWADWLEILPKINKVPAALKLPLARLR-------FWQQSQVENLD------K 170 Query: 173 HNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGW 232 +NQA Y F +E PL Q A + + LVLAGAG GKTSV++ R + Sbjct: 171 YNQAVMNKHKERYKSLFDGLERHPLTEQQRDACIVANDANLVLAGAGCGKTSVMLGRCAY 230 Query: 233 LLARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPI 292 LL +A+ + IL+LAF + AA+EM R+ ERL IT +TFHALAL II+Q + P Sbjct: 231 LLESQQATADSILILAFAKDAAQEMKTRLAERLPNAKITVKTFHALALDIIKQVDNERPK 290 Query: 293 VSKLENDTAARHELF----------IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNF 342 VSKL + +A+ + F K+ +K+ + +E V Sbjct: 291 VSKLASSDSAKQQFFKQIISTRLLDKKLLEKELLDKELLDTNFNNLFSEYCYAYVAWLGK 350 Query: 343 WDDEKL-------------QRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRI 389 D+K ++L +L L + ++E +A + D + Sbjct: 351 LPDDKHDAEVKRLLAGKGGYKKLLGQLVELTMLYKNTLTVKSEQKLNALPD-TDFAALTH 409 Query: 390 KLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAAL 449 +++ LL ++ L N +DF +I +A + G+F SPW HILVDEFQDIS RA L Sbjct: 410 EIVEILLTHYQHELDESNEIDFDEMIIKASDYVRNGQFSSPWLHILVDEFQDISQARATL 469 Query: 450 LAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIG 509 + L+ Q+ + LF VGDDWQAIY+F+G+ +++TT F + FG L+TT+RFN +I Sbjct: 470 VRHLQTQHDDSKLFCVGDDWQAIYQFAGSDIAVTTRFSDYFGITSTLPLNTTFRFNDQIS 529 Query: 510 EVANRFIQQNPGQLKKPLNSLTNGDKKAV---------------------TLLDESQLDA 548 VA++F+ N Q+ K + + T K + TLL E +L Sbjct: 530 AVASKFVMANSEQMHKQITTHTKAKKACIQVSYYQLGNDHKSSNKQDDAATLLLEKKLTQ 589 Query: 549 LLDKLSGYAKPE---ERILILARYHHMRPAS--LEKAATRWPKLQIDFMTIHASKGQQAD 603 L G +K E + +L+LAR++ P S L +T++P+L I MT+H+SKGQ+AD Sbjct: 590 LAAANKGVSKGEGQQKSVLLLARFNFQLPDSKTLTALSTQYPQLDIKSMTVHSSKGQEAD 649 Query: 604 YVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNK 663 VI++ ++ G GFP R L P PDAEERRL YVALTRAR +V+ L NK Sbjct: 650 NVIVLAMEAGEHGFPCHKRRHPFSLILQPEPTGVPDAEERRLFYVALTRARQQVYLLCNK 709 Query: 664 ENPSPFVEILKNLDVPVA 681 + PS F+E L D + Sbjct: 710 DKPSAFIEELVAGDYAIT 727 >UniRef50_A4CC59 DNA helicase IV n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CC59_9GAMM Length = 707 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 224/689 (32%), Positives = 327/689 (47%), Gaps = 29/689 (4%) Query: 12 LAQHPYDRAVILNAGIKVSGDRHEYLIPF-NQLLAIHCKRGLVWGELEFVLPDEKVVRLH 70 L Q + + + I + + + I K G L V + Sbjct: 18 LLQKNNRVITYNSMTVTILQGNQSQTIAWCDIIKPITLKTSWFGGRLTLVTAA-QTFSFK 76 Query: 71 GTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENKWLTREQTSGVQQ 130 + Q L W + + QQL ++ + ++ Sbjct: 77 WLRYDSEQTHQQALLDCWINIHQIKLNTSLRDITQQLT--------KRYFKSSEKPSLEH 128 Query: 131 QIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEAMLTEYADFFR 190 +I Q S +++ + + ++ E Q + + LT Y FF Sbjct: 129 KISQLASTWLGLADKMTLSQDIVASIKQLDTLYPLDEQKTRQFRAYFVQNELTRYKLFFD 188 Query: 191 QVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFG 250 + S P+ P Q +A V + + LVLAGAGSGKTSV+V R G+LL G A P QIL+LA+G Sbjct: 189 KQNSHPMTPKQRQACVINDDNNLVLAGAGSGKTSVMVGRVGYLLQSGLAKPSQILMLAYG 248 Query: 251 RKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 + AA+EMD R++ L DI TFH+LAL II Q +P +S D A R + Sbjct: 249 KDAAQEMDLRLKNSLQRHDIKCATFHSLALSIINQVQGVMPNISVFATDAATRKSWLTEQ 308 Query: 311 WRKQCSEK---KAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 + + + K Q + E + S D + + L + Sbjct: 309 FHYLINRQLSYKKQVIDLLNQVNMEAKKSFSHKTTIDQLLSHSDFVNLQTHVLGLFDLIR 368 Query: 368 GAQAEMIASAPEEIRD-----LFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVIL 422 A A ++ P+ D L+ PL+ A++ L + AVDF +I QA ++ Sbjct: 369 SA-ASALSGVPQYFDDKCTQATLEHYFMLVKPLIDAYQSKLHQQQAVDFDDMIFQAHNMI 427 Query: 423 EKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 G+F +PW HILVDEFQDIS RA LL ALR + LFAVGDDWQ+IYRFSG+ Sbjct: 428 HTGKFKAPWLHILVDEFQDISEPRAQLLKALRDNTHGSVLFAVGDDWQSIYRFSGSNHHF 487 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD 542 T F FG +LD T+RFN++I EVANRF+ QNP Q+KK LNS +VT++ Sbjct: 488 ITQFQRYFGASCTVNLDQTFRFNNKIAEVANRFVMQNPAQMKKELNSKVIQSHSSVTIIT 547 Query: 543 E-------SQLDALLDKLSGYAKPEE-RILILARYHHMRPA--SLEKAATRWPKLQIDFM 592 + + + A++D LS K ++ + ILAR+ + P + R+ L I+ Sbjct: 548 DFNTEKQNANVQAIIDALSFIDKTQKASVYILARFSFLLPNAAQMGLLTQRFKHLIIESY 607 Query: 593 TIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTR 652 T+H+SKG++ADYVI+VGL EG GFPA +++ +A LPP +D+ AEERRL YVALTR Sbjct: 608 TVHSSKGKEADYVILVGLSEGKYGFPAKQNHNLIFDAFLPPQDDYLFAEERRLFYVALTR 667 Query: 653 ARHRVWALFNKENPSPFVEILKNLDVPVA 681 A+ V+ + S FV L N +A Sbjct: 668 AKKHVYLIIPSSGISEFVLELINNQYDIA 696 >UniRef50_Q3IIK2 Putative helicase IV n=1 Tax=Pseudoalteromonas haloplanktis TAC125 RepID=Q3IIK2_PSEHT Length = 731 Score = 421 bits (1081), Expect = e-116, Method: Composition-based stats. Identities = 197/728 (27%), Positives = 328/728 (45%), Gaps = 65/728 (8%) Query: 5 ATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLI--PFNQLLAIHCKRGLVWGELEFVLP 62 + LG+ + + I+ + + FN + + ++ L Sbjct: 8 PSWLGRFFTRIKLLSIEQESLVIEFKNATKQSFLIKDFNDFSQLQ--NRIFSAQINLTLG 65 Query: 63 DEKV-VRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENKWLT 121 + + + + ++ ++ + A +L+ RT +++L Sbjct: 66 ENSAHTTISFLNKAQAKALNIAINQYFSQALEHKINNAKALLK--------RTALDEYLR 117 Query: 122 REQTSGVQQQIRQALSALPLPVNRLEE-FDNCREAWRKCQAWLKDIESARLQHNQAYTEA 180 T+ + ++ N + + + A K+ A Q Y Sbjct: 118 DSNTTILSAEVFSLSKRYQQNHNVWQGYLPSNSSQFLSVLASAKNKNDAIAQLRNKYERK 177 Query: 181 MLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEAS 240 L + ADF+ VES+PL Q AV+ LVLA AG+GKTSV+VA+ L+A +A Sbjct: 178 QLAQRADFYNNVESNPLTNEQRLAVIRNNDKNLVLAAAGTGKTSVMVAKTLDLIATKQAM 237 Query: 241 PEQILLLAFGRKAAEEMDERIRER-----LHTEDITARTFHALALHIIQQGSKKVPIVSK 295 PEQIL+LA+ + AA+E+ R +R L ++ TFHAL L ++QQ K I S Sbjct: 238 PEQILVLAYNKTAAQELKTRFIKRAQQAKLSSKSPEVLTFHALGLQLLQQAGKGCNI-SP 296 Query: 296 LENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEM---------------------- 333 +D A + +Q + + L + + Sbjct: 297 FVSDFGALSSWLTSWLSEQVQAQPVLLSAFIAMLDKPLVSCDTHKSKFNATQVLAILKDS 356 Query: 334 -------------QWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEE 380 ++ D E QR R + ++ +++ ++ ++ Sbjct: 357 GQLKHEVDKYLKCLAAIRAEQLTDSEITQR--LKRQNNQLNTVQLSTNQLNTSQVNSNQK 414 Query: 381 IRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQ 440 + S +L+ + +A+K L A+N +DF +I QA + K + PW+HILVDEFQ Sbjct: 415 STNHHSAAAQLLIAMHRAYKTQLIAQNCIDFDDMILQATQAVNKQQVNVPWQHILVDEFQ 474 Query: 441 DISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDT 500 DIS R ALL +L K + AVGDDWQ+IYRFSG ++LTT F+E G L Sbjct: 475 DISAARMALLNSLIKHGHKVRFTAVGDDWQSIYRFSGGNLALTTRFNELVGSHSLTLLQK 534 Query: 501 TYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLS------ 554 T+R+N+ I +VA RF+ QNP Q KK + + T + V LLD+ +L Sbjct: 535 TFRYNNSISDVAGRFVMQNPEQYKKLIITHTQVAEPQVILLDDVYQGKKSLELKTQQTIN 594 Query: 555 --GYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQE 612 I +L+RY + + A++ + F+T+H++KG +ADY II+GL++ Sbjct: 595 TIQKHHANASIAVLSRYRYTLNKVQQHLASQQKSANVAFLTLHSAKGLEADYCIIIGLEQ 654 Query: 613 GSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFVEI 672 G GFP++ + + + EALLP + F +EERRL+YV LTRA+H+ + + + + PS FV+ Sbjct: 655 GKFGFPSSQQNNPLLEALLPSQDTFAYSEERRLLYVGLTRAKHKAYLIADAKQPSLFVKE 714 Query: 673 LKNLDVPV 680 L N + P+ Sbjct: 715 LINDNYPI 722 >UniRef50_A5UP48 DNA helicase, UvrD/REP helicase family n=2 Tax=Methanobrevibacter smithii RepID=A5UP48_METS3 Length = 610 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 126/527 (23%), Positives = 238/527 (45%), Gaps = 37/527 (7%) Query: 178 TEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARG 237 T L FF+ V S PL+ Q A V ++ ++AGAG+GKT L+A+ +L+A+ Sbjct: 84 TRQELLANDKFFKTVNSKPLDTQQKIACVLDSKNVQIIAGAGTGKTFTLIAKIKYLIAKK 143 Query: 238 EASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSK-----KVPI 292 PE IL L+F + ++ ++ E++ RTFH+L +I+Q K I Sbjct: 144 HVRPEDILCLSFSNTSVRDLKGKL-----PENVEIRTFHSLGRSVIKQHHKVSVIENNEI 198 Query: 293 VSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRL 352 ++ + + A + + + + C + + + + + + L Sbjct: 199 LAIINDYLANANTDTLKDILEFCDSYFLNIESYIIRRNDRKELLNELKEAFTKVAFKPLL 258 Query: 353 ASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFS 412 A +++L + + + +K+ ++ L +DF+ Sbjct: 259 AD----FINLFKGNNFTKDYFSYFRSSNDDKDHDIFLKIAEDFYSYYQKYLDMHQQIDFN 314 Query: 413 GLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAI 472 +I+++ +++K +++ILVDE+QD + L+ +L+ + L VGDDWQ+I Sbjct: 315 DMINESSKLIKKYGLKKHYRYILVDEYQDTTYTNYNLIKSLQDKT-DAHLTVVGDDWQSI 373 Query: 473 YRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTN 532 Y F G + + F E F +R ++ TYR + ++A FI +NP Q++K L S N Sbjct: 374 YGFRGTNIEFFSHFEEYFENPQRIFIEKTYRNPQELIDIAGSFIMKNPKQIRKSLKSPKN 433 Query: 533 GDKKAVTLLDE----SQLDALLDKLSGYAKPEERILILARYHHMRPASLEK--------- 579 K + + + + + + + +K E +LIL R ++ ++ Sbjct: 434 LKKPVKIIYPQKNPIEKREMIYNLIKDLSKKSEDVLILGRTNNNINQFIKHRNLVKKGNL 493 Query: 580 ---------AATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEAL 630 T + + T+H+SKG +AD VII+ + + GFP+ + + + Sbjct: 494 KKDKFLRILDKTDKSMNNVYYRTLHSSKGLEADNVIIINMVDDYLGFPSKLKTHSVLNYV 553 Query: 631 LPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFVEILKNLD 677 D+ +EERRL YV LTR+++ V+ + +K NPS F+E L + Sbjct: 554 NTKNYDYKYSEERRLFYVGLTRSKNNVYLISDKNNPSEFIEELIDDS 600 >UniRef50_C4FEN7 Putative uncharacterized protein n=3 Tax=Bifidobacterium RepID=C4FEN7_9BIFI Length = 716 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 163/558 (29%), Positives = 259/558 (46%), Gaps = 32/558 (5%) Query: 151 NCREAWRKCQAWLKDIESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEH 210 + + K S RL+ A + VE + L+ Q A+V H Sbjct: 114 PSLDLIGRHYGTTKRSNSRRLEPQPLLDAATIANARSTIGNVEKNELSDEQISAIVGAAH 173 Query: 211 SLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDI 270 + LVLAGAG+GKT+ +V WLL G+A P +IL+L+F RK+A+EM RI+ + I Sbjct: 174 NTLVLAGAGTGKTTTIVGYIAWLLNTGKAQPNEILVLSFTRKSADEMSARIQAQTGA-AI 232 Query: 271 TARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLT 330 A TFH+L L I + + + A F + K + L Sbjct: 233 RACTFHSLGLEICRSSTIANRPIIDENVANKAIKAAFDQLLTTSIPYRLLAFKLMPKHLG 292 Query: 331 EEMQWSVPEGNF------WDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPE---EI 381 E+ + NF +D + + L + MR + M A + Sbjct: 293 EKYAAAARLENFRLPVKDYDFSQYAQHLVDTAKTIIQQMRSNNINVDGMRALNRRYGGKH 352 Query: 382 RDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQD 441 ++ + L+ PL +A+ +A N +DF G+I AI ++ G++ ++++L+DE+QD Sbjct: 353 TGRNAEMLDLIEPLYRAYAECFRANNGIDFPGMIVDAIQCVKTGKYRHEYRYVLIDEYQD 412 Query: 442 ISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH---ENFGEGERCDL 498 +S R AL+ ALR+Q +LF VGDDWQ+IYRF+G+ + L F E +GE + Sbjct: 413 MSRPRYALIRALREQ-RDFSLFCVGDDWQSIYRFAGSDIGLILDFDKLWEQWGETRMFQI 471 Query: 499 DTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL----DESQLDALLDKLS 554 TT RF + + E + F+ +P K L+S ++ L E + ++++L Sbjct: 472 TTTRRFRTSLIEASGDFVMADPSLYVKHLHSTNEKKDYSLKALGGKTPEERFTVIVEQLR 531 Query: 555 GYAKPEERILILARYHH-------------MRPASLEKAATRWPKLQIDFMTIHASKGQQ 601 K +L+L RY R P++ I+FMT H SKG Q Sbjct: 532 KLPKK-ASVLLLGRYRSDLNLITGQDREGLFRCDGNSITFLEKPEMTIEFMTAHKSKGLQ 590 Query: 602 ADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALF 661 D+V ++ G GFP+ E + LLP VE +P AEERRL YVA+TR + +++ + Sbjct: 591 RDFVFLLCCSGGLKGFPSTIPEEPLLGLLLPEVERYPHAEERRLFYVAMTRCKKKIFFVV 650 Query: 662 NKENPSPFVEILKNLDVP 679 ++ PS F+ L + P Sbjct: 651 DQTRPSRFIYELHDRICP 668 >UniRef50_B8I5U1 ATP-dependent DNA helicase PcrA n=14 Tax=Firmicutes RepID=B8I5U1_CLOCE Length = 785 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 104/409 (25%), Positives = 171/409 (41%), Gaps = 51/409 (12%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + LN Q AV++ E LL+LAGAGSGKT VL R +L+ + P IL + F KAA Sbjct: 5 NGLNKEQKEAVLHNEGPLLILAGAGSGKTRVLTHRIAYLIEQHGIYPSNILAITFTNKAA 64 Query: 255 EEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM ERI + + D+ TFH++ + I+++ +K+ ++ I E Sbjct: 65 REMKERIAGLIGDLSNDMWVGTFHSICIRILRRDIEKLGYDRSFVIYDTQDQQVVIKECI 124 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 K+ S+ E NF S++ G + E Sbjct: 125 KEL--------------------SINEKNFPP---------------KSVLETIGKQKDE 149 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----F 427 +I + E R+ +A + K ++ LKA NA+DF +I I + +K + Sbjct: 150 LIDAVHYEKLYASDFRMGKIAKIYKLYEKKLKANNALDFDDIIMNTIKLFDKYPEVLDYY 209 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 +++ILVDE+QD + + L+ L + Q L VGDD Q+IY + GA + F Sbjct: 210 QRRFRYILVDEYQDTNTAQYTLVRKLSEA--QENLCVVGDDDQSIYGWRGANIRNILDFE 267 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQL- 546 ++F + L+ YR I + AN I N G+ K L + G K V ++++ Sbjct: 268 KDFKKCCTIKLEQNYRSTQNILDAANHVIGNNTGRKCKSLWTDNKGGSKIVICENDNEHE 327 Query: 547 ------DALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + + + + +L R + E +I Sbjct: 328 EALYAAREIQRLIFDEDRKYKDFAVLYRINAQSRVLEEMFMREGIPYKI 376 Score = 91.7 bits (226), Expect = 9e-17, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 66/185 (35%), Gaps = 36/185 (19%) Query: 519 NPGQLKKPLNSLTNGDKKAVT---LLDESQLDALLDKLSGY--AKPEERILILARYHHMR 573 N + K +++ V +L E +L+ ++ S K + + I Sbjct: 465 NKFRTMKEHMTISQMLDMVVEDSGILREYELENTVEAQSRIENIKELKSVAIEFEKQSED 524 Query: 574 PASLEKAAT----------RWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARE 623 + E A + + + MT+H++KG + V I G++EG A E Sbjct: 525 NSLEEFLAHISLVSDIDSLQEDQDYVVLMTMHSAKGLEFPVVFIPGMEEGVFPGYRAITE 584 Query: 624 SIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWAL----------FNKENPSPFVEIL 673 EERRL YV +TRAR +++ + PS F+ + Sbjct: 585 GP-----------EQLEEERRLCYVGITRAREKLYLSNARFRTLFGNSSYNRPSRFLAEI 633 Query: 674 KNLDV 678 V Sbjct: 634 PEELV 638 >UniRef50_A9KP66 UvrD/REP helicase n=12 Tax=Bacteria RepID=A9KP66_CLOPH Length = 807 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 104/414 (25%), Positives = 167/414 (40%), Gaps = 56/414 (13%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNP Q RAV + +L+LAGAGSGKT VL R +L+ +P QI+ L F KAA+ Sbjct: 6 SLNPEQRRAVEHDRGPMLILAGAGSGKTRVLTHRIAYLIEERNVNPYQIMALTFTNKAAK 65 Query: 256 EMDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM ER+ + + E+I TFH+ + I+++ + + + I E K Sbjct: 66 EMRERVDKIVGYGAENIWVSTFHSTCVRILRRFIETLGYDRNFTIYDTDDQKTLIREVLK 125 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 Q K +R S + A+ E Sbjct: 126 FLQIDTKQTK-------------------------ERVFLSAIS----------SAKDEG 150 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRFI 428 I+ E+ L ++ + K ++ LK NA+DF LI + + + + + Sbjct: 151 ISPEEFELSALGDYNKMKISNVYKEYQRRLKTNNALDFDDLIMKTVELFQSNTEALNYYR 210 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNS-----QTTLFAVGDDWQAIYRFSGAQMSLT 483 + +++I+VDE+QD + + L+ L + + L VGDD Q+IY+F GA + Sbjct: 211 NRFRYIMVDEYQDTNTIQFKLIRLLAHSLNEYNEVEHNLCVVGDDDQSIYKFRGANIRNI 270 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDE 543 F + F + L+ YR I AN I N G+ K L + N D + V+ Sbjct: 271 LDFEKEFPDAVVIKLEQNYRSTKNILNAANEVIHNNLGRKDKSLWT-DNEDGEQVSFCQY 329 Query: 544 SQLDA----LLDKLSGYAKPE----ERILILARYHHMRPASLEKAATRWPKLQI 589 A ++D + + IL R + EK R +I Sbjct: 330 DTDFAEATQVVDSIKTLNDQDGISFNNFAILYRTNAQSRVFEEKMIQRSVPYKI 383 Score = 75.5 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 36/222 (16%), Positives = 79/222 (35%), Gaps = 40/222 (18%) Query: 479 QMSLTTAFHENFGEGERCD-LDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKA 537 + +F++ E L R S+I FI+ +L +L + ++ Sbjct: 437 SVKNNMSFYDALRHAENIPGLG---RSTSKITSFV-SFIETIKSKLSSDTFTLKDLMEEI 492 Query: 538 V------TLLDESQLDALLDKLSGYAKPEERILI----------LARYHHMRPASLEKAA 581 + L+E+ ++ D++ + +I+ L+ + + + Sbjct: 493 LEGTGYLKELEEADDESAEDRIGNINELINKIVTYEVEATEPPTLSGFLEEVALVADIDS 552 Query: 582 TRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAE 641 + MT+H++KG + YV + G+++G FP+ + L E Sbjct: 553 LEEDSNHVVLMTLHSAKGLEFPYVYLCGMEDGI--FPSYMSINAENPELEIEEERRL--- 607 Query: 642 ERRLMYVALTRARHRVWALFNKE----------NPSPFVEIL 673 YV +TRA ++ ++ PS F+ + Sbjct: 608 ----CYVGITRAMKQIHLSAARQRMMRGETQFNRPSRFINEI 645 >UniRef50_B9AEJ9 Putative uncharacterized protein n=2 Tax=Methanobrevibacter smithii RepID=B9AEJ9_METSM Length = 858 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 133/528 (25%), Positives = 235/528 (44%), Gaps = 39/528 (7%) Query: 178 TEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARG 237 + L + A FF + L+ Q A + + L ++AGAG+GKT L+A+A +L+ + Sbjct: 14 LKNELKDNASFFDNFDGKSLDEQQRIACILNDCDLEIIAGAGTGKTHTLLAKAEYLIEKK 73 Query: 238 EASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKK-----VPI 292 SP+ IL L+F + EE+ E++ + T T H+ L +I + K Sbjct: 74 NISPDDILFLSFSKSCVEELIEKLNYNVPT-----STIHSFGLSLINEYRDKEVYDGRGF 128 Query: 293 VSKLENDTAARHELFIAEWRKQCSEKKAQAKGWR-----------QWLTEEMQWSVPEGN 341 E + I + C + L + S + Sbjct: 129 KKIFEEYLKTASDKQIDDITNYCENNLNSHDMIKLIELDREIEKFNHLISKSNISSRIKS 188 Query: 342 FWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKG 401 F D K + +AS + S + + + ++ I+++ P+ + ++G Sbjct: 189 FIDLFKGKGYVASDFKKIKSKCKHDFETNNGGYYTNKNYLNNM--AFIQIVEPVFRFYEG 246 Query: 402 ALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTT 461 L + +DF+ +I++AI ++EK + +K+I VDE+QDIS + + L KQ Sbjct: 247 YLFRNHLIDFNDMINKAIDLVEKEGIFNNFKYIFVDEYQDISYKNFQFIKTL-KQACNAH 305 Query: 462 LFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPG 521 L VGDDWQ+IY F + ++L F + F R ++ TYR + ++A FI +N Sbjct: 306 LVVVGDDWQSIYGFRDSDITLFNDFCDYFPNANRVFIEKTYRNPQELIDIAGNFIMKNES 365 Query: 522 QLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYH----------- 570 Q KK L S +K V ++ +S D++ + + +K E++ IL RY+ Sbjct: 366 QFKKSLKS-DKSIEKPVKIIFDSDSDSIYNLIYNLSKDNEKVFILGRYNGDIDKFIFDTD 424 Query: 571 --HMRPASLEKAATRWPKL-QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIME 627 S ++ + + +++ TIH +KG +ADYV+++ + GFP Sbjct: 425 LVKKSKGSYKQITNDYESIKNVEYRTIHKAKGLEADYVVLINVFNRDWGFPNKFYPPYFV 484 Query: 628 EALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFVEILKN 675 + D EERRL YVA+TRA+ V+ N S +++ L + Sbjct: 485 NLIQDWDYDKKLEEERRLFYVAITRAKKGVYIFTEDYNQSEYIDELID 532 >UniRef50_A8MLJ7 ATP-dependent DNA helicase PcrA n=3 Tax=Firmicutes RepID=A8MLJ7_ALKOO Length = 739 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 98/418 (23%), Positives = 165/418 (39%), Gaps = 51/418 (12%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 ++ LNP Q AV+ E +LVLAGAGSGKT VL R +L+ SP IL + F Sbjct: 15 KESRYHTLNPMQKNAVLTTEGPVLVLAGAGSGKTRVLTHRIAYLVEEKGVSPYHILAITF 74 Query: 250 GRKAAEEMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 KAA+EM ER+ L D+ TFH+ + I++ K+ ++ Sbjct: 75 TNKAAKEMKERVEALLGDYHRDLWVSTFHSSCVRILRMEIDKLGYEKNFVIYDTTDQQVL 134 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 + + K+ + + + R + + + R L+ Sbjct: 135 MKDCLKKFNLDEKLFQ-------------------------PRMILNEIGRAKDLLIGPN 169 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR- 426 E R + +A + + ++ +K+ NA+DF LI + + + + Sbjct: 170 EYLEEFGN----------DFRNQKIAEIYRLYQDRMKSNNALDFDDLIMKTVQLFQTHPT 219 Query: 427 ----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + + +K+ILVDEFQD + + L++ L K + L VGDD Q+IY + GA + Sbjct: 220 VLRYYQNKFKYILVDEFQDTNMAQYTLISLLAKSHG--NLCVVGDDDQSIYGWRGADIRN 277 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD 542 F ++F + L+ YR I + AN + N + K L + + Sbjct: 278 ILGFEKDFPNTQVVKLEQNYRSTKSILDAANMVVANNTDRKSKKLWTDNQDGEIIQYYRA 337 Query: 543 ESQLDA-------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 ++ D + +P IL R + A E R +I T Sbjct: 338 NNEYDEASFISGTIEKLNEEENRPYSEFAILYRTNAQSRALEEMLMKRAIPYKIYSGT 395 Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 27/113 (23%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 + + MT+H++KG + V I G++E + +E+ +E EERR Sbjct: 561 EENTVTLMTLHSAKGLEFPVVFIPGMEESIFPSAMSLQENNLE-------------EERR 607 Query: 645 LMYVALTRARHRVWAL----------FNKENPSPFV----EILKNLDVPVARK 683 L YV +TRAR +++ N S F+ E L +D P RK Sbjct: 608 LCYVGITRAREKLYMSHAMTRTLYGRTNANPISRFLGEIPEELIQIDRPYNRK 660 >UniRef50_D1A297 ATP-dependent DNA helicase PcrA n=3 Tax=Actinomycetales RepID=D1A297_THECD Length = 768 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 96/396 (24%), Positives = 165/396 (41%), Gaps = 54/396 (13%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNP Q AV++ LL++AGAGSGKT VL R +LLA + P QIL + F KAA Sbjct: 13 GLNPQQRAAVLHTGGPLLIVAGAGSGKTRVLTHRIAYLLAERDVHPAQILAITFTNKAAG 72 Query: 256 EMDERIRERLHTED--ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM ER++ + + TFH+ + I+++ ++++ S AA + +A + Sbjct: 73 EMRERVQALVGPRSGAMWVMTFHSACVRILRREARRLGFPSNFSIYDAADAQRLMALVCR 132 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 + + + Q S + D E + R ++ L+ Sbjct: 133 ELDLDPRRYPP----KSFSAQVSNLKNELIDYEAFKARASTHLE---------------- 172 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRFI 428 + +A + ++ L+ A+DF LI + +L+ + Sbjct: 173 ----------------QKLAEAYEMYQARLQQAGAMDFDDLIMTTVHLLQAFPEAAEHYR 216 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQ----TTLFAVGDDWQAIYRFSGAQMSLTT 484 ++HILVDE+QD + + L+ L + + L VGD Q+IY F GA + Sbjct: 217 RRFRHILVDEYQDTNHAQYELVRLLTESPGEDVGPAELCVVGDADQSIYAFRGATIRNIL 276 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDES 544 F +F + L+ YR I AN I++N + K L S +K V + ++ Sbjct: 277 EFERDFPDATTILLEQNYRSTQTILSAANAVIERNAHRKPKRLWSDQGEGEKIVGYVADN 336 Query: 545 QLD------ALLDKLSGYAKPEE-RILILARYHHMR 573 + D A +D+L+ + + R + Sbjct: 337 EHDEAAFVAAEVDRLTDAGLARPGDVAVFYRTNAQS 372 Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 22/119 (18%) Query: 574 PASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPP 633 P + A + + MT+H +KG + V + G+++G FP S +E Sbjct: 580 PIPPGERAPEDEQGVVTLMTLHTAKGLEFPVVFLTGMEDGV--FPHLRAMSNPQEL---- 633 Query: 634 VEDFPDAEERRLMYVALTRARHRVWAL---------FNKENP-SPFVEILKNLDVPVAR 682 EERRL YV +TRAR R++ + NP S F+ + + V R Sbjct: 634 ------EEERRLAYVGITRARQRLYLTRAVMRSAWGAPQVNPASRFLSEVPSSLVKWER 686 >UniRef50_A1A2S5 Putative helicase IV n=2 Tax=Bifidobacterium RepID=A1A2S5_BIFAA Length = 690 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 151/532 (28%), Positives = 247/532 (46%), Gaps = 34/532 (6%) Query: 179 EAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGE 238 + + D +E L+ Q A+ H+ LVLAGAG+GKT+ ++ WLLA Sbjct: 114 ADRIDKARDIIGNIEKHELSDEQISAIAGAGHNTLVLAGAGTGKTTTIIGYIAWLLATKR 173 Query: 239 ASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLEN 298 A+PE+IL+L+F + +A +M +RI + I A TFH+L L I + + + Sbjct: 174 AAPEEILVLSFTKASAGDMSQRIMASTG-KTIRACTFHSLGLEICRAATIANRPIIDGHA 232 Query: 299 DTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNF------WDDEKLQRRL 352 A + F + + K + L + + +F + + ++ L Sbjct: 233 SNAVVRDTFDRLLAQNIPYRLLAFKLMSKELFGKYGAAAKREDFQLPTDDYAFNQYRQSL 292 Query: 353 ASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKR---IKLMAPLLKAWKGALKAENAV 409 + MR + M + ++L+ PL A+ G +A + Sbjct: 293 VENAQTIIQHMRQNNIGIDGMRELNERRGGKHIGRNREMLQLVEPLYNAYVGNFRATQGI 352 Query: 410 DFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDW 469 DF G+I AI + +G + +K++L+DE+QD+S R L+ ALR+Q S TLF VGDDW Sbjct: 353 DFPGMITDAIRCVRRGAYRHLYKYVLIDEYQDMSRPRYELIRALREQ-SDFTLFCVGDDW 411 Query: 470 QAIYRFSGAQMSLTTAFH---ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKP 526 Q+IYRF+G+ + L F ++G + TT RF + + + F+ Q+ K Sbjct: 412 QSIYRFAGSDIHLILDFADIWRDWGPTRMFQITTTRRFRQSLIDASGAFVMQDKSLYAKQ 471 Query: 527 LNSLTNGDKKAVTLL----DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAAT 582 L + ++ ++ L E + DA++++L K +L+L RY Sbjct: 472 LRNPSDKKDYSLKALGGATQEERFDAIIEQLRKLPKT-ASVLMLGRYKSDLNLLSRNDRD 530 Query: 583 ---------------RWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIME 627 PK+ I+FMT H SKG Q D+V ++ G GFP+A E + Sbjct: 531 GLFQIDEHTGGIVFLEKPKMDIEFMTAHKSKGLQRDFVFLLCCSGGLKGFPSAIPEEPLL 590 Query: 628 EALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFVEILKNLDVP 679 LLP VE P AEERRL YVA+TR + +++ + ++ PS F+ L + P Sbjct: 591 GLLLPEVERMPHAEERRLFYVAMTRCKKKLFFVVDQSRPSRFMYELHDKICP 642 >UniRef50_C4G2S8 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2S8_ABIDE Length = 768 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 94/402 (23%), Positives = 160/402 (39%), Gaps = 54/402 (13%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q +AVV+ LL+LAGAGSGKT VL R +L+ SP IL L F KAA E Sbjct: 7 LNPEQKKAVVHENGPLLILAGAGSGKTRVLTRRIAYLIKEYGVSPWNILALTFTNKAARE 66 Query: 257 MDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M ER+ E + E+I TFH+ + ++++ K+ + + + K Sbjct: 67 MRERVDELIEEGAENIWVSTFHSACVKMLRRFIDKIGYDRSFNIYDTDDTKAVVKQVLKA 126 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 + D+++ + + + + A+ + I Sbjct: 127 LN--------------------------IDNKEFPEK---------TCLNVISNAKNDFI 151 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FIS 429 + + F + A + ++ +K NA+DF ++ + + + + + + Sbjct: 152 DAEEFAVNSKFGVDNNVYARVYSEYEKRMKNNNALDFDDILVKTVELFQTDKDTLEYYQR 211 Query: 430 PWKHILVDEFQDISPQRAALLAALR-----KQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 +++ILVDE+QD + + LL L + L VGDD Q+IY+F GA + Sbjct: 212 RFRYILVDEYQDTNIVQFKLLKLLANYVNEDGEIENNLCVVGDDDQSIYKFRGADIRNIL 271 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDES 544 F + + L+ YR I E AN I N + K L + G ++ Sbjct: 272 NFEKIYPNALVIKLEENYRSTGNILEAANGVISNNKERKDKRLWTSKEGGASISYKTYDT 331 Query: 545 QLDA-------LLDKLSGYAKPEERILILARYHHMRPASLEK 579 +L ++ I +L R + A EK Sbjct: 332 GEREANGVANTVLRTVNEGKAKYSDIAVLYRTNAQSRAIEEK 373 Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 20/108 (18%) Query: 578 EKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDF 637 K + ++ MT+H++KG + V IVG++EG FP+ M+E+ L Sbjct: 553 NKDSENKDADKVTLMTLHSAKGLEFKIVFIVGMEEGL--FPSRMCLFAMDESELEEERRL 610 Query: 638 PDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKN 675 YV +TRA +++ PS F+ + Sbjct: 611 --------CYVGITRAMEKLYLSNAASRMLRGDVQWNAPSRFIGEIPE 650 >UniRef50_C2KR35 ATP-dependent DNA helicase n=3 Tax=Mobiluncus RepID=C2KR35_9ACTO Length = 900 Score = 365 bits (937), Expect = 3e-99, Method: Composition-based stats. Identities = 108/484 (22%), Positives = 181/484 (37%), Gaps = 69/484 (14%) Query: 132 IRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEAMLTEYADFFRQ 191 + SAL L +R N L + N T L + + Sbjct: 1 MNDLFSALSLSGSRGASIPNSAA--------LPGSSTHEPPLNPTETAPNLETWREERIT 52 Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 + LNPAQ +AV + +LLV+AGAGSGKT VL R WLLA G P +IL + F Sbjct: 53 AITKGLNPAQYQAVTHPGGALLVMAGAGSGKTRVLTRRIAWLLATGRVRPWEILAITFTN 112 Query: 252 KAAEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIA 309 KAA EM ER+ + + + TFH+ + I++ ++ + I A + + Sbjct: 113 KAAGEMRERVETLVGNAAKYMWVSTFHSSCVRILRAEAETLGITRSFSIYDTADTKALLT 172 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 K + + + R+++ + V A Sbjct: 173 RIIKGRGLDPKR---------------------FTPKSFAARISNAKNELVEPATFAEMA 211 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG---- 425 + I+ +L A + ++ L+ NA DF LI + + + + Sbjct: 212 APDKIS--------------QLTAEIYAEYQQLLRRANAFDFDDLIAEVVYLWRRHPEIL 257 Query: 426 -RFISPWKHILVDEFQDISPQRAALLAALRKQ-------------NSQTTLFAVGDDWQA 471 ++ ++++LVDE+QD +P + L+ L + + L VGD Q+ Sbjct: 258 AKYRDKFRYVLVDEYQDTNPAQYQLVRLLARDPLGDPRLDGALGAHPGAGLTVVGDSDQS 317 Query: 472 IYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLT 531 IY F GA + F ++F L+ YR I VAN I +N G+ KK L + Sbjct: 318 IYAFRGATIRNIEEFEQDFPGATTVYLEQNYRSTGTILSVANAIISENSGRHKKNLWTEA 377 Query: 532 NGDKKAVTLLDESQLDALLDKLSGY------AKPEERILILARYHHMRPASLEKAATRWP 585 KA+ +++ D + P + + R + A E Sbjct: 378 GDGPKAIMFAADTERDEAAFIIREIRDAHTAGTPWDEFAVFYRTNSQSRALEEMLTRENV 437 Query: 586 KLQI 589 ++ Sbjct: 438 PYRV 441 Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 12/76 (15%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 K ++ MT+H +KG + + V + G+++G FP + + EERR Sbjct: 650 TKPEVTLMTVHTAKGLEFNTVFVTGMEDGL--FPHSRSLD----------DPEAIEEERR 697 Query: 645 LMYVALTRARHRVWAL 660 L YVA+TRAR +++ Sbjct: 698 LAYVAVTRARRQLYLT 713 >UniRef50_C6D4S8 ATP-dependent DNA helicase PcrA n=46 Tax=Firmicutes RepID=C6D4S8_PAESJ Length = 785 Score = 365 bits (937), Expect = 3e-99, Method: Composition-based stats. Identities = 92/401 (22%), Positives = 168/401 (41%), Gaps = 51/401 (12%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 LNP Q AV + LL++AGAGSGKT VL R +L+ + +P IL + F KAA Sbjct: 12 QKLNPPQRDAVQATDGPLLIMAGAGSGKTRVLTHRIAYLIEKKRVAPWSILAITFTNKAA 71 Query: 255 EEMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM R+ + +DI TFH++ + I+++ ++ S +A I Sbjct: 72 REMQARVAALIGPTGQDIWVSTFHSMCVRILRRDIDRIGFTSNFSILDSADQLSVIRNCM 131 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 K+ + + ++ + +Q ++ + ++ R Sbjct: 132 KELNIDVKK---------------------FEPKAVQAEISGAKNELITPERYE------ 164 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----F 427 ++ D F+ ++A + K ++ LK+ N++DF LI I + ++ + Sbjct: 165 ------QKTGDYFTD---IVAKVFKMYQKRLKSNNSLDFDDLIMTTIQLFKEMPEVLEFY 215 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + +++I VDE+QD + + L L ++ + VGD Q+IYR+ GA ++ F Sbjct: 216 QNKFRYIHVDEYQDTNRAQYMLCRMLADKHH--NICVVGDSDQSIYRWRGADITNILNFE 273 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLD 547 +++ E L+ YR ++ I E AN I+ N G+ K L + +S+ D Sbjct: 274 DDYPEARTIMLEQNYRSSANILEAANAVIKLNTGRKPKKLWTDQGEGDMITLYQADSEHD 333 Query: 548 A------LLDKLSGYAKPEERILILARYHHMRPASLEKAAT 582 + K + + IL R + E Sbjct: 334 EGYFVTGTISKNVKSGRRYDDHAILYRTNAQSRVIEEILIK 374 Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 56/157 (35%), Gaps = 28/157 (17%) Query: 543 ESQLDALLDKLSGYAKPEERILI-----LARYHHMRPASLEKAATRWPKLQIDFMTIHAS 597 E+ + L + + E++ L+ LA + + + MT+H++ Sbjct: 511 ENIDEFLSVTMDFEKRNEDKTLVAFLTDLALIADIDSMDKDDDGKPADNNSVVLMTMHSA 570 Query: 598 KGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRV 657 KG + V I+G++E A ++ E YV +TRA ++ Sbjct: 571 KGLEFPVVFIIGMEESIFPHSRALNDNEELEEERRL------------AYVGITRAEKQL 618 Query: 658 WALFNKEN----------PSPFVEILKNLDVPVARKP 684 + + PS F++ + + +V P Sbjct: 619 YLTCARSRTLFGRISANLPSRFLQEVPD-NVKTLASP 654 >UniRef50_A8SUE8 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A8SUE8_9FIRM Length = 789 Score = 365 bits (937), Expect = 3e-99, Method: Composition-based stats. Identities = 88/399 (22%), Positives = 166/399 (41%), Gaps = 50/399 (12%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + LN Q +A + + LL+LAGAGSGKT V+ R +L+ +P IL + F KAA Sbjct: 18 AGLNDMQQQACEHVDGPLLILAGAGSGKTRVITHRVAYLMDHEGVNPLNILAITFTNKAA 77 Query: 255 EEMDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM +R+ + + + TFH+L + I+++ + K+ + + + + Sbjct: 78 REMRDRVDLIVGEGADRVWVSTFHSLCVRILRRYADKIGYEKNFDIYDSDDQKSTVKSIL 137 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 K + + ++ ++ ++++S A+ Sbjct: 138 KDFQIDPKR---------------------YPEKMFMSEISKAKEKYMSPDEFARRNAAD 176 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----F 427 A+ +A + ++G LK NA+DF LI++ + + E + Sbjct: 177 YAATK--------------VAEVYTEYQGRLKKNNAMDFDDLIYKTVELFEHNPDVLDTY 222 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + +++I+VDE+QD + + ++ L ++ L VGDD Q+IY+F GA ++ F Sbjct: 223 QNRFRYIMVDEYQDTNHIQFLMVKMLARKYR--NLCVVGDDDQSIYKFRGANITNILNFE 280 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVT------LL 541 + + + + L+ YR I AN IQ N G+ K L + + +K Sbjct: 281 KEYEDAKVIKLEQNYRSCGNILAAANAVIQHNEGRKDKALWTDQDAGEKISFDQCDTEYA 340 Query: 542 DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKA 580 + + + + L I IL R + EK Sbjct: 341 EGDLVASRIKTLVRQGVGYRDIAILYRTNAQSRVLGEKM 379 Score = 92.8 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 37/171 (21%), Positives = 67/171 (39%), Gaps = 37/171 (21%) Query: 513 NRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHM 572 + I ++ + L ++ K V +DE++ L + L E I +++ M Sbjct: 505 SELIAEHTEESMTRLENIDELRNKVVEFVDENEEAGLSEFL-------EEIALVSDLDSM 557 Query: 573 RPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLP 632 Q+ MT+H++KG + YV I G+++ FP+ L Sbjct: 558 SE----------DDNQVKLMTLHSAKGLEFPYVFICGMEDRV--FPSGMA--------LN 597 Query: 633 PVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEIL 673 + EERRL YV +TRA +++ +E S F+ + Sbjct: 598 SDDPDALEEERRLCYVGITRAMKKLYLSAARERMMHGNRISSDVSRFIREI 648 >UniRef50_C7N6W8 DNA/RNA helicase, superfamily I n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N6W8_SLAHD Length = 772 Score = 365 bits (936), Expect = 4e-99, Method: Composition-based stats. Identities = 87/411 (21%), Positives = 162/411 (39%), Gaps = 51/411 (12%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 ++ LN Q AV+ E LLVLAGAGSGKT VL R ++ P QI+ + F Sbjct: 2 LDIDSLNEPQREAVLCTEGPLLVLAGAGSGKTRVLTYRIAHMVQDLNVPPWQIMAITFTN 61 Query: 252 KAAEEMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIA 309 KAA EM ER+ + + TFH++ + I++ + + + + Sbjct: 62 KAANEMRERLGRLVGPSARGMWVSTFHSMCVRILRVDCELLGFSKSFTIYDDDDTKRLLK 121 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 + + +W V + ++ + + ++ G Sbjct: 122 DVMAGLDL-------------DPKRWPVNS------------IRGKISQAKNELKAPGVY 156 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR--- 426 +E RD S K+ A + ++ LK NA DF L+ ++ + Sbjct: 157 --------ADEARDPVS---KVTARVYAVYQERLKMANAFDFDDLLMYTYLLFKNHPDVL 205 Query: 427 --FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 + ++++LVDE+QD + + A+ L ++ + VGDD Q+IY + GA + Sbjct: 206 EAYQDRFRYLLVDEYQDTNHAQYAITKLLAAKHQ--NIMVVGDDDQSIYSWRGADIRNIL 263 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDES 544 F +++ + L+ YR + I AN + N + +K L + + +K + + Sbjct: 264 EFEQDYPQARSIKLEQNYRSSGNILNAANAVVAHNTKRKQKRLFTESGDGEKILVYMASD 323 Query: 545 QLDA------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + D +DKL E + + R + + + +I Sbjct: 324 ERDEGRWIAGEIDKLHNEGVSYEEMAVFYRTNAQSRSLEDMLLRAGVPYRI 374 Score = 93.6 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 72/182 (39%), Gaps = 36/182 (19%) Query: 513 NRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHM 572 ++ IQ + S K+ ++++DE +D+ A P E I +LA + Sbjct: 484 SQLIQALEQERTDEAESRIENIKEFLSVVDEYVESHEIDE---SALPPEGINLLADTRQL 540 Query: 573 RPASLEK-----------AATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAA 621 P SLE A + MT+H+SKG + D V + G++E ++ Sbjct: 541 SPDSLEDFLEWVRLRTDLDAATDDDQFVTLMTVHSSKGLEFDCVFVAGMEETLFPHSNSS 600 Query: 622 RESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENP----------SPFVE 671 R+ E EERRL YVA+TRAR R++ S FV Sbjct: 601 RDPQGLE------------EERRLAYVAITRARKRLYLTCAYARQIFGETHANPVSRFVG 648 Query: 672 IL 673 + Sbjct: 649 EI 650 >UniRef50_D2NR24 Superfamily I DNA and RNA helicase n=17 Tax=Bacteria RepID=D2NR24_9MICC Length = 985 Score = 364 bits (933), Expect = 1e-98, Method: Composition-based stats. Identities = 95/417 (22%), Positives = 169/417 (40%), Gaps = 62/417 (14%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 ++ LN Q AV++ LL++AGAGSGKT VL R +LLA A+P QIL + F KA Sbjct: 140 TAGLNERQEEAVLHSGSPLLIVAGAGSGKTRVLTHRIAYLLATHRATPGQILAITFTNKA 199 Query: 254 AEEMDERIRERLHTED--ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 A EM ERI + + TFH+ + ++++ + + + S + + ++ Sbjct: 200 AAEMRERIEALVGPRAKHMWISTFHSFCVRVLRREAAALGLKSTFTIYDSTDSQRLLSLI 259 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 K+ N + + + +R+ + + + Sbjct: 260 IKEL-------------------------NLDTKKFTAKAVGNRISALKNELVSAEAYAS 294 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GR 426 + + P E K +A + + L+A N++DF LI + + +L+K Sbjct: 295 RVASDNPYE---------KTIAQIYTVYTQRLRAANSLDFDDLIGRTVFLLKKFPEIANY 345 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQN--------------SQTTLFAVGDDWQAI 472 + ++HILVDE+QD + + L+ L + L VGD Q+I Sbjct: 346 YRRKFRHILVDEYQDTNHAQYQLVRELVGAHVKAPADRGPYPDAVPPAELTVVGDSDQSI 405 Query: 473 YRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTN 532 Y F GA + T F +++ L+ YR I AN I++NP + K L + + Sbjct: 406 YAFRGADIRNITDFEKDYPNAHTILLEQNYRSTQNILSAANAVIERNPDRRPKKLWTASG 465 Query: 533 GDKKAVTLLDESQLDA------LLDKLS-GYAKPEERILILARYHHMRPASLEKAAT 582 K + + ES+ +D+L+ + + I R + + Sbjct: 466 AGAKIIGYVAESEHAEARFITREIDRLADEHGVQPGDVAIFYRTNAQSRTLEDMLMR 522 Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 22/92 (23%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 + MT+H +KG + V + G++ G A ++ +EERRL Y Sbjct: 726 MVTLMTLHTAKGLEFPVVFLTGMEHGLFPHQRALT------------DEKEMSEERRLAY 773 Query: 648 VALTRARHRVWALFNKEN----------PSPF 669 V LTRA R++ ++ PSPF Sbjct: 774 VGLTRAMERLYLTRSETRTMWGKSQFNPPSPF 805 >UniRef50_C7MAK0 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria RepID=C7MAK0_BRAFD Length = 932 Score = 363 bits (932), Expect = 1e-98, Method: Composition-based stats. Identities = 105/400 (26%), Positives = 165/400 (41%), Gaps = 46/400 (11%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNPAQ AV + LL++AGAGSGKT VL R LL EA P +IL + F KAA Sbjct: 121 GLNPAQREAVEHRGSPLLIVAGAGSGKTRVLTRRIAHLLHSREALPGEILAITFTNKAAA 180 Query: 256 EMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM ER+ E + + TFH+ + I+++ + + S +A I K Sbjct: 181 EMRERVGELVGPVARSMWVSTFHSACVRILRRDAAAAGLKSSFTIYDSADSLRLITTIAK 240 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 + R LASR+ + + Sbjct: 241 DL-------------------------QLDTKKHAPRALASRISSLKNDLVDPID----- 270 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FI 428 A E ++ F + + A + + L+ NAVDF LI + +L + + Sbjct: 271 FADQAESAKNPFERTL---AQIYTNYTERLRQANAVDFDDLIGLTVTLLRENPAIREGYR 327 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 ++H+LVDE+QD + + L+ L + +L VGD Q+IY F GA + F + Sbjct: 328 RRFRHLLVDEYQDTNTAQYQLVRELVGDDPHASLTVVGDSDQSIYAFRGATIRNIIEFEQ 387 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS-LTNGDKKAVTLLDESQLD 547 +F L+ YR I AN I++N G+ KK L + G++ + + D+ Q + Sbjct: 388 DFPSARTIVLEQNYRSTQNILAAANSVIEENEGRRKKNLWTDQGEGEQITLYVADDEQAE 447 Query: 548 AL-----LDKLSGYAKPEERILILARYHHMRPASLEKAAT 582 A +D L + I I R + A ++ Sbjct: 448 ARYIGRQIDALVDDGRRAGDIAIFYRANAQSRALEDQLIR 487 Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 39/105 (37%), Gaps = 22/105 (20%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + MT+H +KG + V + G+++G+ + E YV Sbjct: 722 VTLMTLHTAKGLEFPVVFLTGMEDGTFPHNRTLSDPEELEEERRL------------AYV 769 Query: 649 ALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVARK 683 +TRAR +++ + S F++ + + VAR Sbjct: 770 GITRAREKLFLTRAQMRALWGQTQFMPASRFLDEVPESVLDVARA 814 >UniRef50_C9XK50 ATP-dependent DNA helicase n=5 Tax=Clostridium RepID=C9XK50_CLODC Length = 762 Score = 362 bits (929), Expect = 2e-98, Method: Composition-based stats. Identities = 94/418 (22%), Positives = 172/418 (41%), Gaps = 51/418 (12%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 R + LNPAQ AV E +L+LAGAGSGKT VL R +L+ IL + F Sbjct: 7 RNMNLDTLNPAQREAVEKTEGPVLILAGAGSGKTKVLTTRIAYLIEDKGVQAPNILAITF 66 Query: 250 GRKAAEEMDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 KAA EM ER+ + + E D+ TFH+ + I+++ K+ +A Sbjct: 67 TNKAANEMRERVEQNIGPETKDMWISTFHSCCVRILRKDINKIGYNRSFVIYDSADQVTL 126 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 + + K+ L+ ++ +++ Sbjct: 127 VKDCLKEL-----------------------------------NLSDKVFEPKAVISAIS 151 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-- 425 GA+ ++ + ++ R+ +A + ++ LK +A+DF LI + + + + Sbjct: 152 GAKDKLYTPKQFKDINMADNRMVKIADIYALYQDRLKRNSALDFDDLILKTVELFKANDE 211 Query: 426 ---RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + S +++I+VDE+QD S + L+ L +++ + VGDD Q+IY + GA + Sbjct: 212 VLAYYRSRFRYIMVDEYQDTSKAQYELIKLLAREHQ--NICVVGDDDQSIYGWRGADIRN 269 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD 542 F +++ L+ YR I + AN+ I N + +K L S + L Sbjct: 270 ILEFEKDYDNVHVVKLEQNYRSTQVILDAANKVISNNIERKRKKLWSEKKEGELIKIQLT 329 Query: 543 ESQLDA---LLDKLSGYA----KPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 S+++ + D ++ A +P + +L R + + I T Sbjct: 330 GSEIEEADFIADSIAQIARKENRPYKDFAVLYRANAQARPVEDALNRSQIPYNIYGGT 387 Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats. Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 20/101 (19%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 ++ MTIH SKG + V + G++EG + + D EERR Sbjct: 567 DNDRVSLMTIHTSKGLEFPVVFLTGMEEGLFP----------ISRAIKSMSDSQIEEERR 616 Query: 645 LMYVALTRARHRVWA-------LFNKEN---PSPFVEILKN 675 L YV +TRA+ ++ L+ K N S F+E L Sbjct: 617 LCYVGITRAKEELYMSLTEKRTLYGKTNVAIASRFMEELPE 657 >UniRef50_C4Z8S4 ATP-dependent DNA helicase PcrA n=17 Tax=Firmicutes RepID=C4Z8S4_EUBR3 Length = 763 Score = 362 bits (928), Expect = 3e-98, Method: Composition-based stats. Identities = 94/397 (23%), Positives = 163/397 (41%), Gaps = 51/397 (12%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV+ E LL+LAGAGSGKT VL R +L+ +P I+ + F KAA E Sbjct: 6 LNEQQREAVLTTEGPLLILAGAGSGKTRVLTYRTAYLIDECGVNPYNIMAITFTNKAAGE 65 Query: 257 MDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M ERI + + +E I TFH+ + I+++ ++ + A + + + K+ Sbjct: 66 MRERIDDMVGYGSESIWVSTFHSTCVRILRRYIDRLGYDTNFTIYDADDQKALMKDICKR 125 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 + +++ + + + A+ EMI Sbjct: 126 L-----------------------------------EIDTKMYKEKMFLNVISSAKDEMI 150 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FIS 429 E R + A + K ++ ALK NA+DF L+ + + + + + + Sbjct: 151 DPIEFENRFTGDFVKRKQALVYKEYQNALKQNNALDFDDLLVKTVELFKLDKEVLDYYQE 210 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 +++I+VDE+QD + + L+ L + L VGDD Q+IY+F GA + F ++ Sbjct: 211 RFRYIMVDEYQDTNTVQFELIRLLAMKYK--NLCVVGDDDQSIYKFRGANIYNILNFEKH 268 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQL--- 546 F + + L+ YR I + AN I N G+ K L + + ES Sbjct: 269 FEDAKVIKLEQNYRSTQNILDAANSVISNNVGRKDKRLWTDNGAGDRITFEQLESGFEEA 328 Query: 547 ----DALLDKLSGYAKPEERILILARYHHMRPASLEK 579 ++ + + +L R + EK Sbjct: 329 DYVARSIARLVRKGEARYKDCAVLYRTNAQSRLFEEK 365 Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 19/93 (20%) Query: 591 FMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVAL 650 MT+H++KG + V + G+++G FP+ ++ EERRL YV + Sbjct: 551 LMTLHSAKGLEFPNVYLAGMEDGL--FPSYM-------SITSDDATSEIEEERRLAYVGI 601 Query: 651 TRARHRVWALFNK----------ENPSPFVEIL 673 TRA+ + + S FV+ + Sbjct: 602 TRAKEHLTITSARMRMVRGETQFNKVSRFVKEI 634 >UniRef50_C7MP63 DNA/RNA helicase, superfamily I n=6 Tax=Coriobacteriaceae RepID=C7MP63_CRYCD Length = 841 Score = 362 bits (928), Expect = 4e-98, Method: Composition-based stats. Identities = 86/412 (20%), Positives = 156/412 (37%), Gaps = 53/412 (12%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 ++ LNP Q AV+ E LLVLAGAGSGKT VL R ++ +P +IL + F Sbjct: 3 LDLETLNPEQHEAVMTTEGPLLVLAGAGSGKTRVLTYRIAHMIEDLGVAPWEILAITFTN 62 Query: 252 KAAEEMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIA 309 KAA EM ER+ + + TFH++ + I++ ++ + + I Sbjct: 63 KAAAEMRERLGALVGPAARGMWVSTFHSMCVRILRANAEVIGFTKNFTIYADDDSKRLIK 122 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 + Q + + L+ R++S + + Sbjct: 123 DIMAQLDIDPKR---------------------FPVNALRNRISSAKNELI--------- 152 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAP-LLKAWKGALKAENAVDFSGLIHQAIVILEKGR-- 426 P+ S I L+A + + L NA DF L+ ++ + Sbjct: 153 -------LPDAFDQRASDPIALVAARVYHELQKRLHQANAFDFDDLLMYTWLLFKHHPNV 205 Query: 427 ---FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 + ++++LVDE+QD + + A+ L ++ + VGDD Q+IY + GA + Sbjct: 206 LEAYQERFRYLLVDEYQDTNHAQYAITTLLAARHK--NIMVVGDDDQSIYSWRGADIRNI 263 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDE 543 F +++ + L+ YR + I + AN I N + K L + K + Sbjct: 264 LEFEQDYPQTRTVKLEKNYRSTATILDAANAVIAHNVNRKSKRLVPTGDTGDKIHVYMAS 323 Query: 544 SQLDA------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + D +++ +I + R + + +I Sbjct: 324 DERDEGRWIAGEIERRHTQGTSYNQIALFYRTNAQSRMLEDMLLRAGVPYRI 375 Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 22/95 (23%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + MT+HA+KG + D V + G++E + + EERRL YV Sbjct: 640 VTLMTVHAAKGLEFDCVFVAGMEETIFPHMNSI------------NDATGVEEERRLAYV 687 Query: 649 ALTRARHRVWALFNKEN----------PSPFVEIL 673 A+TRAR +++ S F+ + Sbjct: 688 AITRARKQLYITCASNRKLFGQTQANPTSRFLAEI 722 >UniRef50_UPI0001C3187F UvrD/REP helicase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3187F Length = 746 Score = 360 bits (924), Expect = 9e-98, Method: Composition-based stats. Identities = 99/392 (25%), Positives = 171/392 (43%), Gaps = 51/392 (13%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + LN Q AVV+GE LL+LAGAGSGKT VL R +L+ G+A P++IL + F KAA Sbjct: 15 AGLNEPQREAVVHGEGPLLILAGAGSGKTRVLTHRIAYLVGTGQARPDEILAITFTNKAA 74 Query: 255 EEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 +EM ER+ + T + TFH+ +++ + ++ + + + Sbjct: 75 QEMRERVEMLVGRRTRAMWVMTFHSACARMLRADAHRLGYTRQFTIYDQSDARRLVKRAI 134 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 ++ D +R + +S + Sbjct: 135 EEL-----------------------------DVDPKRFTPGAIHHEISDAKNK------ 159 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRF 427 + A + + S + +A + K ++ L NA+DF L+ +A+ +LE + R+ Sbjct: 160 -LRDAEAYAQMVGSFFEQTVADVYKLYESELHRMNAMDFDDLLVRAVNVLELFPEVRRRY 218 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 ++H+LVDE+QD + + L + ++ L VGDD Q+IY F GA + F Sbjct: 219 ADNFRHVLVDEYQDTNHVQYRWLQLIAGEHR--NLAVVGDDSQSIYGFRGADIRNILDFE 276 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS-LTNGDKKAVTLLDESQL 546 ++F + + L+ YR I + AN I+ N GQ +K L + L GD V LD+ Sbjct: 277 DDFPDAKVVKLEQNYRSTQTILDAANAVIRNNRGQREKELWTDLGIGDPIKVRELDDEHA 336 Query: 547 DA-----LLDKLSGYAKPEERILILARYHHMR 573 +A ++++ I + R + Sbjct: 337 EARFVAGEIERIVDEGVSRNEIAVFYRTNAQS 368 Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 48/140 (34%), Gaps = 23/140 (16%) Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQAD 603 +L + + G E LA + + R + + MT+H +KG + Sbjct: 519 EELVNVAAEYDGSVDLREEAPSLAGFLQQIALVADADGRRDDEGLVTLMTLHNAKGLEYP 578 Query: 604 YVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNK 663 V ++G +EG A E +EE YV LTRA ++ + + Sbjct: 579 IVFLLGCEEGVFPHQRAIEEGGLEEERRL-------------AYVGLTRAMRDLYMTYAR 625 Query: 664 ENP----------SPFVEIL 673 S FV+ + Sbjct: 626 TRAVFGSRSYGARSRFVDEV 645 >UniRef50_C8WTI7 ATP-dependent DNA helicase PcrA n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WTI7_ALIAD Length = 756 Score = 360 bits (924), Expect = 9e-98, Method: Composition-based stats. Identities = 102/402 (25%), Positives = 168/402 (41%), Gaps = 51/402 (12%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 LN Q AV + +LV+AGAGSGKTSVL R +L+A P IL + F KAA Sbjct: 12 KGLNEKQREAVTATDGPVLVIAGAGSGKTSVLTRRIAYLIAERRVPPWAILAITFTNKAA 71 Query: 255 EEMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM+ERI + DI TFHA+ I+++ + S AA + Sbjct: 72 REMEERIERLVGPVASDIWTSTFHAMCARILRRDIHHLGYTSAFTVLDAADQVSLV---- 127 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 + L +EM V + R + + + + +R Sbjct: 128 --------------RRLMQEMNIDVRKFE-------PRAVLHAISQHKNELR-------- 158 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRF 427 SA + + S K++ + A++ L+ A+DF L+ + + + K + Sbjct: 159 ---SAEKALDLAGSPYDKMVGDVYLAYERRLRENQALDFDDLLVKTVELFRKVPDVLAYY 215 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + HI VDE+QD + + L+ L ++ + L VGD Q+IY + GA + F Sbjct: 216 QHRFSHIHVDEYQDTNHAQYVLVKLLAER--RRNLCVVGDSDQSIYGWRGADIRNILEFQ 273 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKA---VTLLDES 544 ++ + L+ YR RI +AN+ IQ N +L+K L + +KA V + Sbjct: 274 RDYPDARVIRLEQNYRSTGRILRIANQVIQHNQMRLEKNLWTDRGEGEKAKLFVAPDERV 333 Query: 545 QLDALLDKLSG---YAKPEERILILARYHHMRPASLEKAATR 583 + D + D+++ + + IL R + E R Sbjct: 334 EADWVADEIARMVANGREYRDVAILYRTNAQSRVLEEAFLQR 375 Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 22/108 (20%) Query: 581 ATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDA 640 R ++ MT+HA+KG + V +VGL+EG FP EE Sbjct: 557 GRREDLDEVSMMTLHAAKGLEFPVVFLVGLEEGV--FPHRRALDGGEELEEERRL----- 609 Query: 641 EERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDV 678 YV +TRA R++ + PS F+ + D+ Sbjct: 610 -----CYVGITRAMERLYLTTCRSRMLFGERRSFTPSRFLSEMPASDI 652 >UniRef50_C8W206 ATP-dependent DNA helicase PcrA n=2 Tax=Clostridiales RepID=C8W206_DESAS Length = 737 Score = 359 bits (921), Expect = 2e-97, Method: Composition-based stats. Identities = 100/404 (24%), Positives = 168/404 (41%), Gaps = 53/404 (13%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + LNP QA AV + + LL+LAGAGSGKT VL R LL + SP IL + F KAA Sbjct: 15 AGLNPVQAEAVRHVDGPLLILAGAGSGKTRVLTHRIAHLLLSEKVSPFNILAITFTNKAA 74 Query: 255 EEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM ER+ L D+ TFH+ L I+++ + + I + Sbjct: 75 LEMRERVAAILPGVARDLWVATFHSTCLKILRRDGQLLGYGQDFSVYDEGDRHTLIKDCI 134 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 K+ + DD+ + S + A+ + Sbjct: 135 KELN--------------------------IDDKTFSPQYVSSI---------ISKAKNK 159 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RF 427 +I + R+ + + A + K ++ LK NAVDF L+ + + ++ R+ Sbjct: 160 LIDEDKYD-READNILTQKAAGIYKLYQKKLKTYNAVDFDDLLFLVVRLFKEHPNVLERY 218 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 +++ILVDE+QD + + L+ L +++ L VGD Q IY + GA + +F Sbjct: 219 QHKFRYILVDEYQDTNYVQYLLVKMLAQKSR--NLCVVGDPDQGIYGWRGADIQNILSFE 276 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVT--LLDE-S 544 ++ E L+ YR I + AN I N G+ +K L + + DE + Sbjct: 277 RDYPEACVVTLEQNYRSTQNILDAANHIISYNQGRKEKRLWTDAGKGSPIIVCKSRDEFA 336 Query: 545 QLDALLDKLSGY----AKPEERILILARYHHMRPASLEKAATRW 584 + +++++ +L R H + LE+ R+ Sbjct: 337 EARHVVEQIKHLHLVEGVSYSECAVLYRTHA-QSRVLEEIMLRY 379 Score = 90.5 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 22/118 (18%) Query: 566 LARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESI 625 L + + +++ MT+H +KG + +V +V ++EG FP S Sbjct: 537 LGEFLSELSLVTDADRDNGEAERVNMMTLHTAKGLEFPFVFLVAMEEGI--FPHNRALS- 593 Query: 626 MEEALLPPVEDFPDAEERRLMYVALTRARHRVWALF----------NKENPSPFVEIL 673 + EERRL YV +TRAR +++ + N PS F+E + Sbjct: 594 ---------DAGELEEERRLAYVGMTRARQKLYLSYSFQRTIYGNTNYCRPSRFLEEI 642 >UniRef50_A0Q2Q4 ATP-dependent DNA helicase PcrA, putative n=23 Tax=Clostridium RepID=A0Q2Q4_CLONN Length = 760 Score = 359 bits (920), Expect = 3e-97, Method: Composition-based stats. Identities = 92/407 (22%), Positives = 168/407 (41%), Gaps = 51/407 (12%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q A E +LVLAGAGSGKT VL R ++ IL + F KAA E Sbjct: 7 LNKEQYEAATAIEGPVLVLAGAGSGKTRVLTYRIAHMIEDLGIPQYNILAITFTNKAAGE 66 Query: 257 MDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M +RI++ + + + + TFH+ + I+++ K+ + + + + K+ Sbjct: 67 MKDRIKKLVSNNIDSMWVSTFHSSCVRILRREIDKLGYNKNFAIYDSTDQKNLVKQCMKE 126 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 N D + ++ + S++ G + +I Sbjct: 127 L-------------------------NISDKDINEKEIISKI----------GKQKDNLI 151 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FIS 429 + + R+ R +A + ++ LK NA+DF LI + + + +K + + Sbjct: 152 TAEEYKKRNEKDFRKNRIADVYLLYQKKLKNSNALDFDDLIFKTVELFKKHPEVLEFYQN 211 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 +K+I+VDE+QD + + L+ L + +F VGDD Q IY++ GA + F ++ Sbjct: 212 KFKYIMVDEYQDTNKTQYQLVKMLAAAHR--NIFVVGDDDQCIYQWRGADIKNILDFEKD 269 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKK-----AVTLLDES 544 + E + L+ YR + I AN I+ N + K L + +K A + +DE Sbjct: 270 YPEAKVVKLEENYRSKANILNAANTVIKHNSQRKNKVLRTQNENGEKIKIYRAYSDMDEG 329 Query: 545 QL--DALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + + + + + IL R + + R +I Sbjct: 330 LFISNEIKRLIKKENRSYKDFAILYRTNAQSRVFEDVFMKRDIPYRI 376 Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 24/94 (25%) Query: 591 FMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEE-RRLMYVA 649 MT+H++KG + V +VG++ G FP A +E+F + EE RRL YV Sbjct: 553 MMTLHSAKGLEFPVVFMVGMENGI--FPGA-----------QSLENFAEMEESRRLCYVG 599 Query: 650 LTRARHRVWALFNKEN----------PSPFVEIL 673 +TRA+ +++ S F+ + Sbjct: 600 ITRAKEQLYMTSASTRKVFGRSVAYSESDFINEI 633 >UniRef50_B1I553 ATP-dependent DNA helicase PcrA n=6 Tax=Bacteria RepID=B1I553_DESAP Length = 718 Score = 359 bits (920), Expect = 3e-97, Method: Composition-based stats. Identities = 95/402 (23%), Positives = 162/402 (40%), Gaps = 51/402 (12%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + LNPAQA AV + LLVLAGAGSGKT VL +R +L+ P +IL + F +AA Sbjct: 11 TELNPAQAEAVCHPGGPLLVLAGAGSGKTRVLTSRIAYLVRVHRVEPHRILAITFTNRAA 70 Query: 255 EEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM ER+ + +D+ TFHA L I+++ +K+ A + I + Sbjct: 71 REMKERVASLVPHAVDDLWVMTFHAACLRILRREIEKLGYSKNFVIYDEADQQTVIKDCL 130 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 K+ + + Q + +S + AE Sbjct: 131 KELNLEPRQHP-----------------------------PAMFSAAISWQKNALVGPAE 161 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRF 427 +A + + +L A + A++ L+ NA+DF L+ A+ + + ++ Sbjct: 162 FAGAA-------YDQHQELTARVYAAYQARLERNNALDFDDLLFLAVRLFREFPPVLEQY 214 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + H+LVDE+QD + + L+ L + + L VGD Q IY + GA + F Sbjct: 215 RRRFLHLLVDEYQDTNHAQYVLVNLLAQTHR--NLTVVGDPDQCIYGWRGADLRNILNFE 272 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL------L 541 ++ + L+ YR RI E AN I+ N + +K L + + V Sbjct: 273 RDYPDARVVKLEQNYRSTGRILEAANHVIRFNRHRKEKELWTARGAGEAPVLHQARDERA 332 Query: 542 DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATR 583 + + + +L + + R H ++ Sbjct: 333 EARFVAREIRRLRAQGRSYRDFAVFYRTHAQSRVLEDELLRH 374 Score = 86.3 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 22/99 (22%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 Q+ MT+H++KG + V + G++EG FP S E EERR Sbjct: 548 ESSQVTLMTLHSAKGLEFPVVFLTGMEEGV--FPHTRAFS----------EPVEMEEERR 595 Query: 645 LMYVALTRARHRVWALFNKEN----------PSPFVEIL 673 L YV +TRAR R++ + PS F+ + Sbjct: 596 LCYVGITRARERLFLTLAESRLLYGNVYYGVPSRFLREI 634 >UniRef50_C2CV85 Possible ATP-dependent DNA helicase n=2 Tax=Bifidobacteriaceae RepID=C2CV85_GARVA Length = 964 Score = 358 bits (919), Expect = 3e-97, Method: Composition-based stats. Identities = 93/433 (21%), Positives = 162/433 (37%), Gaps = 55/433 (12%) Query: 178 TEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARG 237 T A + + Q LNP Q++AV +LL+ AGAGSGKT VL R W+LA Sbjct: 85 TSAQSSNIPEINPQSLLEGLNPQQSKAVQYTGPALLIGAGAGSGKTRVLTRRIAWILANR 144 Query: 238 EASPEQILLLAFGRKAAEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSK 295 +A P QIL + F KAA EM ER+ + + TFH+ + I++ + + S Sbjct: 145 KAWPSQILAITFTNKAAAEMRERLASLIGNSANSMWVSTFHSACVKILRAHGDSIGLKSG 204 Query: 296 LENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASR 355 ++ E + + + E+ + + + Sbjct: 205 FSIYDSSDCERLV------------------KIIASELNIDIKKFTPKLLLSKISDFKNN 246 Query: 356 LDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLI 415 L W ++ + + + + L A + ++ L NAVDF LI Sbjct: 247 LVTWQENLKNYAPDYKPGASVSGASSFNAAGNADALYAAVYAEYQNRLSVSNAVDFDDLI 306 Query: 416 HQAIVILEKGR-----FISPWKHILVDEFQDISPQRAALLAALRKQN------------- 457 + +L + + +++ILVDE+QD + + L+ L + Sbjct: 307 MLTVKLLRQNPQVSAYYKRKFRYILVDEYQDTNHAQYVLIRELAGVDDAGVDDYSTDSTV 366 Query: 458 ----------SQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSR 507 Q+++ VGD Q+IY F GA + F ++F L+ YR Sbjct: 367 SSVSPDSTQLPQSSITVVGDSDQSIYAFRGADIRNIQDFEQDFPSATTIMLEQNYRSTQT 426 Query: 508 IGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDES---QLDALLDKLSGY----AKPE 560 I + AN I N + K L + V + ++ + + +++ Sbjct: 427 ILDAANAVISNNANRKPKKLWTSLGKGSPIVGYVADNAQGEASWVAQEIARLAGEDGVNY 486 Query: 561 ERILILARYHHMR 573 I I+ R + Sbjct: 487 SDIAIMYRANSQS 499 Score = 82.4 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 22/109 (20%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 ++ MT+H +KG + V + G+++G+ FP + +E EERR Sbjct: 694 DTGKVTLMTLHTAKGLEYPVVFLTGMEQGT--FPHSRCVDNQKELC----------EERR 741 Query: 645 LMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVARK 683 L YV +TRA+ ++ + E S F++ + + RK Sbjct: 742 LAYVGITRAKKILYVTWAAERSQWGKSAEMIQSQFLDEIPADLISWKRK 790 >UniRef50_C2L0R7 ATP-dependent DNA helicase PcrA n=1 Tax=Oribacterium sinus F0268 RepID=C2L0R7_9FIRM Length = 793 Score = 357 bits (917), Expect = 6e-97, Method: Composition-based stats. Identities = 100/393 (25%), Positives = 172/393 (43%), Gaps = 47/393 (11%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q A +GE LL+LAGAGSGKT VL R +L+ SP QIL + F KAA+E Sbjct: 7 LNKEQYEAATHGEGPLLILAGAGSGKTRVLTHRIAYLILEKGISPYQILAITFTNKAAQE 66 Query: 257 MDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M +R+ + L +I TFH++ L I+++ + S + + + K+ Sbjct: 67 MRDRVNQLLPERQGEIWVSTFHSMCLRILRREIGNLGYDSDFSIYDTDDQKTVMRQVFKE 126 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 D + L+ RL + +S ++ G + ++ + Sbjct: 127 LQ--------------------------IDSKMLKERL---VLSALSQVKNQGRSVSDYL 157 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRFIS 429 PE+ D + ++ ++ LK NA+DF L+ + + EK ++ Sbjct: 158 LEDPEDFLD------GKIRACIRLYEEKLKQNNALDFDDLLLRCKELFEKFPAVLEKYQE 211 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 +++ILVDE+QD + + L+ L K+ + VGDD Q+IYRF GA + +F + Sbjct: 212 RFRYILVDEYQDTNDVQFHLVYLLAKKYQ--NICVVGDDDQSIYRFRGANVENILSFESH 269 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDES---QL 546 F + L+ YR + I ++AN I +N + +K L + K ES + Sbjct: 270 FPNCKVVKLEQNYRSTAPILDLANVVIAENQHRKQKKLWTAEKEGLKVSFQEYESAKEEA 329 Query: 547 DALLDKLSGYAKPEERILILARYHHMRPASLEK 579 A++ + + +L R + E+ Sbjct: 330 AAVIRGIRDAGWSYKDQAVLYRTNAQSRLLEEQ 362 Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 53/155 (34%), Gaps = 26/155 (16%) Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQAD 603 + L KL Y + L+ + + + + +I MT+H +KG + Sbjct: 499 ENIQELQGKLQSYIEENGDEGSLSAFLEEVSLLSDLDRSDLTEDKITLMTLHGAKGLEFP 558 Query: 604 YVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNK 663 V +VGL EG FP+A EE L YV +TRA ++ + Sbjct: 559 VVYLVGLNEGL--FPSAQSMFTPEEREEERR----------LFYVGITRAEKELYLTAGR 606 Query: 664 EN----------PSPFV----EILKNLDVPVARKP 684 + S FV E +KP Sbjct: 607 DRVVHGQYQSMLVSSFVDDVPEEHLEKKYLYRKKP 641 >UniRef50_A8HYL6 DNA helicase II n=8 Tax=Rhizobiales RepID=A8HYL6_AZOC5 Length = 835 Score = 357 bits (916), Expect = 7e-97, Method: Composition-based stats. Identities = 100/391 (25%), Positives = 153/391 (39%), Gaps = 51/391 (13%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNP Q AV + +LVLAGAG+GKT VL R +L++G A P QIL + F KAA Sbjct: 71 GLNPEQREAVETLDGPVLVLAGAGTGKTRVLTTRIAHILSQGRAYPSQILAVTFTNKAAR 130 Query: 256 EMDERIRERLHTE---DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM ERI + TFH++ + I+++ + V + S + Sbjct: 131 EMKERIHAMVGDTVEGMPWLGTFHSIGVRILRRHHELVGLKSGFTILDTDDQLRLL---- 186 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 + + + R LAS +D W + A Sbjct: 187 ---------------------KQLIAAEEIDEKRWPARMLASAIDGWKNRGLTPEQVPAG 225 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RF 427 A+ + L A++ LKA NAVDF L+ + I + + + Sbjct: 226 EGAAFANGRGQM----------LYAAYQARLKALNAVDFGDLLLEGIRLFRENPDVLAEY 275 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 +K+ILVDE+QD + + L L + + VGDD Q+IY + GA++ F Sbjct: 276 HRKFKYILVDEYQDTNVAQYLWLRLLAQ--GSRNVCCVGDDDQSIYGWRGAEVDNILRFE 333 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL------L 541 +F + L+ YR I A+ I N G+L K L S +K Sbjct: 334 SDFPGAKVIRLERNYRSTGHILAAASHLIAFNEGRLGKTLFSEGEKGEKVTVTGAWDSGE 393 Query: 542 DESQLDALLDKLSGYAKPEERILILARYHHM 572 + + ++ L +I IL R Sbjct: 394 EARAIGDEIEALQRAGHALSQIAILVRASFQ 424 Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 20/105 (19%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + MT+H++KG + D V + G +EG FP L EERRL YV Sbjct: 609 VQIMTLHSAKGLEFDTVFLPGWEEGL--FPHQRA--------LDEQGKAGLEEERRLAYV 658 Query: 649 ALTRAR----------HRVWALFNKENPSPFVEILKNLDVPVARK 683 +TRAR R+ ++N PS F++ L + V V Sbjct: 659 GITRARASARVYFASNRRIHGMWNSTVPSRFLDELPDTHVDVQES 703 >UniRef50_C5C915 ATP-dependent DNA helicase PcrA n=7 Tax=Actinomycetales RepID=C5C915_MICLC Length = 858 Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats. Identities = 105/475 (22%), Positives = 177/475 (37%), Gaps = 57/475 (12%) Query: 132 IRQALSALPLPVNRLEEFDNCREAWRKCQA-WLKDIESARLQHNQAYTEAMLTEYADFFR 190 + AL PL +R + A + + + + + Sbjct: 4 LFSALGRSPLNPSRTRRDADPETALPGLVPPAVTRAAADPEAGARGWGDDAAGAAVAHTP 63 Query: 191 QVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFG 250 LNP Q+ AV + LL++AGAGSGKT VL R WLLA G A P +IL + F Sbjct: 64 DSLVEGLNPQQSAAVTHTGAPLLIVAGAGSGKTRVLTHRIAWLLATGRARPHEILAITFT 123 Query: 251 RKAAEEMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFI 308 KAA EM ER+ + + + TFH+ A+ +++ + + + S +A + Sbjct: 124 NKAAAEMRERVAGLIGPTAQRMWISTFHSSAVRLLRNEAANIGLKSTFTIYDSADSLRLV 183 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 KQ + L +R+ + + Sbjct: 184 TTVAKQ-------------------------HELDPKRFAPKALLNRISSLKNELVEADD 218 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-- 426 A + P + +A + + + L+ NA+DF LI + + E Sbjct: 219 YAATVAEGDP---------WGRAVAAVYRDYTARLRQANALDFDDLIGMTVHMFEAFPRV 269 Query: 427 ---FISPWKHILVDEFQDISPQRAALLAALRK--------QNSQTTLFAVGDDWQAIYRF 475 + ++H+LVDE+QD + + L+ L + L VGD Q+IY F Sbjct: 270 LDNYRRRFRHVLVDEYQDTNHAQYRLIRLLAGPAGDPEGVETPGGELTVVGDSDQSIYAF 329 Query: 476 SGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDK 535 GA + F ++F + L+ YR I + AN I++NP + K L + Sbjct: 330 RGADIRNIVEFEQDFTDAVTIKLEQNYRSTQTILDAANAVIERNPDRRPKRLWTAEGEGP 389 Query: 536 KAVTLLDESQ------LDALLDKLSGY-AKPEERILILARYHHMRPASLEKAATR 583 V E++ + A +D+L + + R + A E+ TR Sbjct: 390 AIVGYAAENESAEAEWIAATIDRLQDEDGIRPSDVAVFYRTNAQSRALEERLVTR 444 Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 22/100 (22%) Query: 586 KLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRL 645 + Q+ MT+H +KG + V + G++ G FP A ++ AEERRL Sbjct: 633 QGQVTLMTLHTAKGLEFPVVFLTGMEHGV--FPHAR----------SMTDEKELAEERRL 680 Query: 646 MYVALTRARHRVWALFNKEN----------PSPFVEILKN 675 YV LTRAR R++ + PS F+ + Sbjct: 681 AYVGLTRARRRLFLTRAEARSLWGQHQFNPPSQFLGEIPE 720 >UniRef50_A1AUN0 ATP-dependent DNA helicase PcrA n=10 Tax=Desulfuromonadales RepID=A1AUN0_PELPD Length = 762 Score = 357 bits (915), Expect = 1e-96, Method: Composition-based stats. Identities = 99/418 (23%), Positives = 164/418 (39%), Gaps = 56/418 (13%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV++GE LL+LAGAGSGKT V+ R L+ P IL + F KAA E Sbjct: 7 LNQPQKSAVLHGEGPLLILAGAGSGKTRVITHRIAHLIHNHGVRPWNILAVTFTNKAARE 66 Query: 257 MDERIRERLHTED-ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQC 315 M ER+ L D TFHA I+++ + S E + + K Sbjct: 67 MSERVSRLLGGGDAPLIATFHAACGRILRREIHHLGFDSSFAIYDERDCERLLKDLLKDM 126 Query: 316 SEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIA 375 + R +A+R+D + + Sbjct: 127 DLDDKKFS-------------------------PRIVAARIDDYKNRGLFPHDL------ 155 Query: 376 SAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRFISP 430 P D+F+ + + + A++ L+ NA+DF ++ Q + +LE + R Sbjct: 156 -DPVATGDIFNAK---VVQIYAAYQERLRKCNALDFGDMLIQTVRLLEQFPEVRQRCQER 211 Query: 431 WKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENF 490 ++ I+VDE+QD +P + L+ L + + L VGDD Q+IY + GA + F ++F Sbjct: 212 FQWIMVDEYQDTNPVQYRLIRLLAGE--RRNLCVVGDDDQSIYSWRGADIRNILEFEKDF 269 Query: 491 GEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDA-- 548 + L+ YR + I + A + +N G+ K L + +K ES + Sbjct: 270 PDVAVVRLEQNYRSTTTILKAAGAVVSRNIGRRGKTLWTENPEGEKIRYHRVESDREEAR 329 Query: 549 ----LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQA 602 + L P E + + R + E + + + H G + Sbjct: 330 LVAREIVSLRSRGIPLEEMAVFYRTNAQSRLVEEALVS-------EALPYHIVGGVRF 380 Score = 87.1 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 22/98 (22%) Query: 586 KLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRL 645 K + MT+HA+KG + V ++G++E FP ++ EERRL Sbjct: 546 KPSVTLMTLHAAKGLEFRAVFMIGMEERL--FPHVRALDDLDGM----------EEERRL 593 Query: 646 MYVALTRARHRVWALFNKEN----------PSPFVEIL 673 YV +TRAR R++ L + PS F++ + Sbjct: 594 CYVGMTRARERLYLLNTRRRYLFGQEQCNPPSRFLKDI 631 >UniRef50_D2R9Y0 Putative ATP-dependent DNA helicase PcrA n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2R9Y0_GARVA Length = 1023 Score = 356 bits (914), Expect = 1e-96, Method: Composition-based stats. Identities = 92/490 (18%), Positives = 183/490 (37%), Gaps = 55/490 (11%) Query: 111 ATRTGENKWLTREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESAR 170 + ++ + +++ Q+ + +P + ++ A + + Sbjct: 65 EPDFTQQEYASDQESVPPQESV---PPQESVPPQESVPSQESVPSQQEALAQQELLPQES 121 Query: 171 LQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARA 230 +++Q + + + A Q LNP Q++AV +LL+ AGAGSGKT VL R Sbjct: 122 QEYSQNFAHSRVAVDA----QKLLDGLNPQQSQAVQYDGPALLIGAGAGSGKTRVLTRRI 177 Query: 231 GWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTED--ITARTFHALALHIIQQGSK 288 W+L++ A P QIL + F KAA EM ER+ + + +E + TFH+ + I+++ + Sbjct: 178 AWILSQKGAWPSQILAITFTNKAAAEMRERLSKLIGSEANTMWVSTFHSACVKILRRSGQ 237 Query: 289 KVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKL 348 + + S + E + + + E+ + + + Sbjct: 238 YIGLKSGFSIYDTSDCERLV------------------KIIATELNVDIKR---FTPRSI 276 Query: 349 QRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENA 408 +++ + ++ + + + A + ++ L NA Sbjct: 277 LGKISDCKNSLITWREQLDMYANDYKPGVAGQQIAHAGNSEAVYATIYAEYQHRLSQANA 336 Query: 409 VDFSGLIHQAIVILEK-----GRFISPWKHILVDEFQDISPQRAALLAALRK-------- 455 VDF LI + + ++ + + +++ILVDE+QD + + L+ L Sbjct: 337 VDFDDLIMRTVQLMREVPEAAQYYRHKFRYILVDEYQDTNHAQYELIRELAGVDVKQNSA 396 Query: 456 -----QNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGE 510 N+ ++ VGD Q+IY F GA + F ++F L+ YR I + Sbjct: 397 NPSQQNNTPASITVVGDSDQSIYAFRGADIRNIQDFEKDFPNATTIMLEQNYRSTQTILD 456 Query: 511 VANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDES-------QLDALLDKLSGYAKPEERI 563 AN I N G+ K L + +S + + Sbjct: 457 AANAVISHNQGRKPKKLWTALGKGTPITGYAADSAQQEAAWVAQEIARLAGEEGVAYSDM 516 Query: 564 LILARYHHMR 573 I+ R + Sbjct: 517 AIMYRANAQS 526 Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 22/109 (20%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 ++ MT+H +KG + V + G+++G+ FP + +D EERR Sbjct: 718 DTGKVTLMTLHTAKGLEYPVVFLTGMEQGT--FPHSRALE----------DDGELCEERR 765 Query: 645 LMYVALTRARHRVWAL----------FNKENPSPFVEILKNLDVPVARK 683 L YV +TRA+ R++ PS F++ + + + R+ Sbjct: 766 LAYVGITRAKQRLYVTRAAVRAQWGQAQDMLPSQFLDEIPDNLIDWKRR 814 >UniRef50_D1VUE5 ATP-dependent DNA helicase PcrA n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUE5_9FIRM Length = 720 Score = 356 bits (913), Expect = 2e-96, Method: Composition-based stats. Identities = 98/411 (23%), Positives = 176/411 (42%), Gaps = 51/411 (12%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 ++ LN Q A++ E LL+LAGAGSGKT V+ ++ +L+ E +IL + F Sbjct: 1 MDIDSLNDKQKEALLYNEGPLLILAGAGSGKTKVVTSKIAYLIEN-EVPSWRILAITFTN 59 Query: 252 KAAEEMDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIA 309 KAA EM ER+ + + + TFHA+ + I+++ + + S A I Sbjct: 60 KAAREMRERVAMLIDEDVSPMWIGTFHAICVRILRKNIENLGYGSNYNIYDRADQNTIIK 119 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 E K+ N + R + S++ W + Sbjct: 120 ESYKEL-------------------------NINKEIYNSRTILSKISSWKN----EELT 150 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR--- 426 +E++ E+I + + + + + ++ LK NA+DF L+ + + +L + Sbjct: 151 PSEVLDGNKEDIFNFNAGK------IYEFYQNKLKENNALDFDDLLIKTVELLREFPDVR 204 Query: 427 --FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 + + +K+I VDE+QD + + L+ + L VGD+ Q+IY++ GA +S Sbjct: 205 EFYQNKFKYIFVDEYQDTNSIQYKLIKLFCGKAP--NLTVVGDNDQSIYKWRGADISNIL 262 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVT---LL 541 F ++F + L+ YR I +VAN I+ NP +L K L + G +K + Sbjct: 263 NFQKDFPGAKIIKLEQNYRSTQNILDVANSVIKNNPQELSKSLWTKRQGGEKVYYKEFSV 322 Query: 542 DESQLDALLDKLSGY---AKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + A+ +K+ G E + IL R + E + +I Sbjct: 323 SNEEEFAVTNKILGLNYKGYSFEDMAILYRTNAQSRGFEESLSREGINYKI 373 Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 46/211 (21%), Positives = 73/211 (34%), Gaps = 48/211 (22%) Query: 494 ERCDLDTTY-----RFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDA 548 E Y R I AN I + L N + A ++DESQ Sbjct: 436 EVIKNIENYEDLNVRAKKNIKSFAN-LINLLIERKD-----LLNVGELAELVVDESQYVE 489 Query: 549 LLD---------KLSGYAKPEERILILARYHHMRPAS-----LEKAATRWPKLQIDFMTI 594 L K+S + I+ + + L ++ MT+ Sbjct: 490 DLKNQNTLEARTKISNIDELISNIMSYDKETSLSDYLSNMSLLTDIDKTSDAKGVNLMTV 549 Query: 595 HASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRAR 654 HA+KG + V +VG++EG ++ ED EERRL YVA+TRA Sbjct: 550 HAAKGLEFKIVFLVGMEEGLFP-------------IIRQDEDEDIEEERRLCYVAITRAE 596 Query: 655 HRVWALFNKEN----------PSPFVEILKN 675 ++ +K S F+ +++ Sbjct: 597 DLLFISSSKTRYLYGKMTPKIKSRFINEMQD 627 >UniRef50_B2GM51 ATP-dependent DNA helicase UvrD1 n=10 Tax=Actinomycetales RepID=B2GM51_KOCRD Length = 818 Score = 355 bits (912), Expect = 2e-96, Method: Composition-based stats. Identities = 98/412 (23%), Positives = 157/412 (38%), Gaps = 58/412 (14%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + LN Q AV + LL++AGAGSGKT VL R LLA G A +IL + F KAA Sbjct: 38 AGLNEPQRAAVEHSGAPLLIVAGAGSGKTRVLTHRIAHLLATGRARRGEILAITFTNKAA 97 Query: 255 EEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM ERI E + + TFH+L + I+++ +K + + + +A I + Sbjct: 98 AEMRERIAELVGDSARTMWISTFHSLCVRILRREAKTLGLNTNFSIYDSADSLRLITQVA 157 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 KQ + + R+ + + A Sbjct: 158 KQ-------------------------HELDPKRFAPKAIQHRISALKNELVDDETCLAR 192 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----F 427 ++ P E +A + + + L+A NA+DF LI + + + + Sbjct: 193 ASSTDPFE---------SAVAQVYRGYTQRLRAANAMDFDDLIGETVHMFRAFPQVLEYY 243 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQN----------SQTTLFAVGDDWQAIYRFSG 477 ++H+LVDE+QD + + AL+ L + L VGD Q+IY F G Sbjct: 244 RRRFRHVLVDEYQDTNHAQYALVRELVGGDSPGHTDESGIPPAELTVVGDSDQSIYAFRG 303 Query: 478 AQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKA 537 A + T F +F L+ YR I AN I QN + K L + Sbjct: 304 ADIRNITDFERDFPAARTIMLEQNYRSTQNILSAANAVISQNADRRDKKLWTAEGDGAPI 363 Query: 538 VTLLDES------QLDALLDKLS-GYAKPEERILILARYHHMRPASLEKAAT 582 V E+ + +D+L + + + R + + E Sbjct: 364 VGYAAENEHEEARFIAEEIDRLQDEHGIRPGDVAVFYRTNAQSRSLEEILMR 415 Score = 84.4 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 22/95 (23%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + MT+H +KG + V + G++ G + + EERRL YV Sbjct: 620 VTLMTLHTAKGLEFPVVFLTGMEHGIFPHQRSFADPS------------SMEEERRLAYV 667 Query: 649 ALTRARHRVWALFNKENP----------SPFVEIL 673 +TRAR R++ + SPF++ + Sbjct: 668 GITRARQRLYITRAESRSLWGQSQFNPASPFLDEI 702 >UniRef50_A5GA79 UvrD/REP helicase n=10 Tax=Desulfuromonadales RepID=A5GA79_GEOUR Length = 678 Score = 355 bits (912), Expect = 2e-96, Method: Composition-based stats. Identities = 95/406 (23%), Positives = 169/406 (41%), Gaps = 55/406 (13%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 + S LNP Q AV + E +LLVLAGAGSGKT V+ R LL + IL + F Sbjct: 2 LNLSTLNPQQLAAVKHTEGALLVLAGAGSGKTGVITYRIAHLLLNKKVPAMNILAVTFTN 61 Query: 252 KAAEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFI 308 KAA+EM ER+ + + I TFH+L + I+++ + + + + + Sbjct: 62 KAAKEMRERVDSLVGRQACKGIIISTFHSLGVRILRRNIELLGYKRNFSIYSTSDQIGLV 121 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 + ++ + +G +D + + ++++ ++ + Sbjct: 122 KQIMREVNI---------------------DGKKYDADSIIWKISAAKNKLI-------- 152 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMA-PLLKAWKGALKAENAVDFSGLIHQAIVILEKG-- 425 P+ F +LMA + ++ ALKA NA+DF +I +L+ Sbjct: 153 --------PPDRFTPRFGDEYELMAAEVYPRYQSALKAFNAIDFDDIIMLTADLLQNHPE 204 Query: 426 ---RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + +++++VDE+QD + + L+ L L VGDD Q+IY + GA + Sbjct: 205 VLQHWQERFRYVMVDEYQDTNASQYLLVNLLA--GGYGNLCVVGDDDQSIYGWRGADVGN 262 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKK---AVT 539 F ++F E L+ YR I E AN I N + +K L + + + V Sbjct: 263 ILDFEKDFKECRVVKLEQNYRSTGNILEAANHVIGHNAKRKEKRLWTASGSGRPLDLIVM 322 Query: 540 LLDESQLDALLDKLS----GYAKPEERILILARYHHMRPASLEKAA 581 DE + +++++ + IL R + E+ Sbjct: 323 QDDEEEATTVVERMQMERFKHNLAYSDFAILYRTNAQSRPFEEQLR 368 Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 22/105 (20%) Query: 579 KAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFP 638 K + + M++H+SKG + YV +VG++E + EDF Sbjct: 549 KDKKEHGRDAVTLMSLHSSKGLEFPYVFLVGMEEEILPHKRSI------------YEDFT 596 Query: 639 DAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEIL 673 EERRL YV +TRAR + + PS F+E + Sbjct: 597 VDEERRLCYVGITRARKHLIMTRCLQRKKYGKLQERVPSRFLEEI 641 >UniRef50_A9WKU6 DNA helicase II n=2 Tax=Bacteria RepID=A9WKU6_RENSM Length = 797 Score = 355 bits (912), Expect = 3e-96, Method: Composition-based stats. Identities = 99/409 (24%), Positives = 165/409 (40%), Gaps = 59/409 (14%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 LNP Q AV + LL++AGAGSGKT VL R +LLA G A P QIL + F KAA Sbjct: 32 HGLNPEQEAAVTHAGSPLLIVAGAGSGKTRVLSHRIAYLLATGRAHPGQILAITFTNKAA 91 Query: 255 EEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM ERI + +++ TFH+ + I+++ + V + S +A I Sbjct: 92 AEMRERIAALIGDAAKNMWISTFHSSCVRILRREASTVGLNSSFSIYDSADSLRLITLIA 151 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVP--EGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 + +++ + MQ + + DD+ Sbjct: 152 RGLDLDP------KRFAPKAMQHKISALKNELIDDDAFA--------------------- 184 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KG 425 A+ P E + +A + + + L+ NA+DF LI Q + + Sbjct: 185 --ATATDPFE---------QGVAEVYRGYTQRLRQANALDFDDLIAQTVWLFRAFPGVAD 233 Query: 426 RFISPWKHILVDEFQDISPQRAALLAALRK-----QNSQTTLFAVGDDWQAIYRFSGAQM 480 + ++H++VDE+QD + + AL+ + + L VGD Q+IY F GA + Sbjct: 234 YYRRRFRHVMVDEYQDTNHAQYALVKEIVGPAEGSGDEPAELTVVGDSDQSIYAFRGADI 293 Query: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL 540 F +++ L+ YR I AN I++NP + K L + +K + Sbjct: 294 RNIVEFEKDYPNARTIKLEQNYRSTQTILSAANAVIEKNPDRPVKRLWTAEGDGEKIIGY 353 Query: 541 LDES------QLDALLDKLSGYAK-PEERILILARYHHMRPASLEKAAT 582 + E+ + +D+L A + I R + + E Sbjct: 354 VAENEHEEARFIAEEIDRLQDEADFRPGDVAIFYRTNAQSRSIEEILMR 402 Score = 84.4 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 22/95 (23%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + MT+H +KG + V + G++ G FP A + AEERRL YV Sbjct: 598 VTLMTLHTAKGLEFPAVFLTGMEHGI--FPQAR----------SATDAKELAEERRLAYV 645 Query: 649 ALTRARHRVWAL----------FNKENPSPFVEIL 673 LTRAR R++ SPF++ + Sbjct: 646 GLTRARKRLYLTRAEVRSLWGQSQYNPASPFIDEV 680 >UniRef50_Q8CRT9 ATP-dependent DNA helicase pcrA n=245 Tax=cellular organisms RepID=PCRA_STAES Length = 729 Score = 355 bits (910), Expect = 4e-96, Method: Composition-based stats. Identities = 97/392 (24%), Positives = 158/392 (40%), Gaps = 51/392 (13%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 +N Q+ AV E LL++AGAGSGKT VL R +LL + SP IL + F KAA Sbjct: 6 KNMNSEQSEAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNILAITFTNKAA 65 Query: 255 EEMDERIRERLHTED--ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 +EM R+ + E I TFH++ + I+++ + ++ I + I + Sbjct: 66 KEMKARVEHLVGEEAQVIWMSTFHSMCVRILRRDADRIGIERNFTIIDPTDQKSVIKDVL 125 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 K N R + + ++ AQ E Sbjct: 126 K-------------------------SENIDSKRFEPRMFIGAISNLKNELKTPEDAQKE 160 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRF 427 +++A + K ++ L A+DF LI I + E+ + Sbjct: 161 A-----------NDFHSQMVATVYKGYQRQLSRNEALDFDDLIMTTINLFERVPETLEYY 209 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + +++I VDE+QD + + L+ L N L VGD Q+IY + GA + +F Sbjct: 210 QNKFQYIHVDEYQDTNKAQYTLVKLLA--NKFKNLCVVGDSDQSIYGWRGADIQNILSFE 267 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKK-----AVTLLD 542 E++ E + L+ YR I AN I+ N + K L + +G K A+T D Sbjct: 268 EDYPEAKTIFLEQNYRSTKNILNAANEVIKHNSERKPKGLWTANSGGDKIQYYEAMTERD 327 Query: 543 ES-QLDALLDKLSGYAKPEERILILARYHHMR 573 E+ + + K K + IL R + Sbjct: 328 EAEYVVKEIMKHQRSGKKYSEMAILYRTNAQS 359 Score = 86.3 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 20/111 (18%) Query: 576 SLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVE 635 + + + MT+H++KG + V I+G++E FP + + Sbjct: 537 LVADIDEADTQNGVTLMTMHSAKGLEFPIVFIMGMEESL--FPHIRA--------IKSED 586 Query: 636 DFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNL 676 D EERR+ YVA+TRA ++ PS F++ + Sbjct: 587 DHEMEEERRICYVAITRAEELLYITNATTRMLFGRSQSNMPSRFLKEIPED 637 >UniRef50_C1A3F5 ATP-dependent DNA helicase UvrD1 n=31 Tax=Bacteria RepID=C1A3F5_RHOE4 Length = 830 Score = 355 bits (910), Expect = 4e-96, Method: Composition-based stats. Identities = 98/400 (24%), Positives = 171/400 (42%), Gaps = 55/400 (13%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNP Q AVV+ LL++AGAGSGKT+VL R +LLA +P QIL + F KAA Sbjct: 34 GLNPQQREAVVHAGSPLLIVAGAGSGKTAVLTRRIAYLLAERGVTPGQILAITFTNKAAA 93 Query: 256 EMDERIRERLHTE--DITARTFHALALHIIQ-QGSKKVPIVSKLENDTAARHELFIAEWR 312 EM ER+ + + TFH+ + I++ Q + + S + + Sbjct: 94 EMRERVAALVGPRANAMWVSTFHSSCVRILRAQAALLPGLNSNFSIYDSDDSRRLLTMIS 153 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 K D ++ RL L +S ++ E Sbjct: 154 KDLE--------------------------LDTKRFSARL---LATHISNLKNELVGPEE 184 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----F 427 + +A ++ +L +L+A + ++ L+A NA+DF LI + + +L+ + Sbjct: 185 AVVAADQDPAELP----RLIAKVYGHYQQRLRAANALDFDDLIGETVALLQAFPQIAEYY 240 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTT-------LFAVGDDWQAIYRFSGAQM 480 ++H+LVDE+QD + + L+ L ++ L VGD Q+IY F GA + Sbjct: 241 RRRFRHVLVDEYQDTNHAQYMLVRELVGGAGESDHAVAPAELCVVGDADQSIYAFRGATI 300 Query: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL 540 F ++ + L+ YR I AN I +N G+ +K L + + + V Sbjct: 301 RNIEEFERDYPDARTILLEQNYRSTQNILSAANSVISKNTGRREKRLWTDSGEGELIVGY 360 Query: 541 LDESQLD------ALLDKLSGYAKPE-ERILILARYHHMR 573 + +++ D + +D+L + + I + R ++ Sbjct: 361 VADNEHDEASFVASEIDRLVDQGETKFADIAVFYRTNNSS 400 Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 22/98 (22%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + MT+H +KG + V + G ++G FP + +EERRL YV Sbjct: 627 VTMMTLHTAKGLEFPVVFVTGWEDGQ--FPHMRA----------LGDPAELSEERRLAYV 674 Query: 649 ALTRARHRVWALFN----------KENPSPFVEILKNL 676 +TRAR R++ + S F++ + Sbjct: 675 GITRARQRLYLTRAIMRSAWGQPIQNPASRFIQEIPED 712 >UniRef50_C0VSX9 ATP-dependent DNA helicase n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VSX9_9CORY Length = 735 Score = 355 bits (910), Expect = 5e-96, Method: Composition-based stats. Identities = 96/390 (24%), Positives = 166/390 (42%), Gaps = 53/390 (13%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 S LNP Q AV++ + LL++AGAGSGKT+VL R LL P QIL + F KAA Sbjct: 8 SDLNPQQRDAVLHDDSPLLIVAGAGSGKTAVLTRRIAHLLRFKGVQPWQILAITFTNKAA 67 Query: 255 EEMDERIRERLHTE--DITARTFHALALHIIQQGSKKVP-IVSKLENDTAARHELFIAEW 311 +EM ER+ + E ++ TFH+ + I+++ ++ VP + S + Sbjct: 68 KEMQERVIGLIGPEAQNMAVATFHSTCVRILRRNAQLVPGLNSNFTIYDSDD-------- 119 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 +K Q + ++M + + + R L +++ W + + A Sbjct: 120 ----------SKRLLQQIAKDMDLDIKKFS-------PRVLGNKISGWKNELIGVDDAVK 162 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR----- 426 E K++ + ++ L+ NA+DF LI + + I + Sbjct: 163 EH----------------KVIGQVYGFYQERLRRANALDFDDLIGEVVRIFREHPDVTAY 206 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + ++H+LVDE+QD + + ++AL ++ T L VGD Q+IY F GA + F Sbjct: 207 YRRRFRHVLVDEYQDTNHAQYEFISALVGKDG-TGLCVVGDADQSIYAFRGATIRNIREF 265 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL---DE 543 +F L+ YR I AN I N + KK L + K + + +E Sbjct: 266 ERDFPNATTILLEQNYRSTQNILSAANAVISHNEHRGKKNLWTDQGAGPKIIGYVADREE 325 Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMR 573 + + + P + ++ R + Sbjct: 326 DEARFIASTIDDRNLPYNEVAVMYRTNAAS 355 Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 58/157 (36%), Gaps = 18/157 (11%) Query: 505 NSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDE--SQLDALLDKLSGYAKPEER 562 +G++ N I G + S D+ + L+E + + + + Sbjct: 467 TQEVGDLIN-LITDVSGYRDELEKSKDPRDEARLDNLNELVAYARDFAQQARANDEDDSV 525 Query: 563 ILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAAR 622 L R + + + MT+H +KG + YV + G +EG FP Sbjct: 526 QAFLERVSLVAD---ADQIPDAGQGVVTLMTLHTAKGLEFPYVFLPGWEEGQ--FPHMRS 580 Query: 623 ESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWA 659 EE EERRL YV +TRAR +++ Sbjct: 581 LGNTEEI----------EEERRLAYVGITRARKQLFI 607 >UniRef50_A7VTM6 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VTM6_9CLOT Length = 740 Score = 353 bits (907), Expect = 9e-96, Method: Composition-based stats. Identities = 85/394 (21%), Positives = 165/394 (41%), Gaps = 52/394 (13%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 +NP Q AV++ E LL+LAGAGSGKT+VL+ R +++ + A P QIL + F KAA Sbjct: 9 KKMNPRQLEAVLHTEGPLLILAGAGSGKTTVLINRIAYIIDQSLAKPWQILAITFTNKAA 68 Query: 255 EEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 E+ ER+ L D+ A TFH+ I+++ ++ S + + + + Sbjct: 69 GELKERLTAMLGDTGGDVWAATFHSTCARILRRDGDRIGYSSHFTVYDTDDSKRLVKDCQ 128 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 K + ++ S++ A+ Sbjct: 129 KAL-----------------------------------NIDDKMISHKSILSEISHAKDS 153 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----F 427 M++ A + R+ + + + ++ L+ +A+DF L+ + + + + Sbjct: 154 MLSPADYQAAAGSDFRLAKIGAVYELYQKRLREADAMDFDDLLGNTVELFRQCPDVLEYY 213 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + +++I+VDE+QD + + + L +++ L VGDD Q+IY+F GA + +F Sbjct: 214 QNRFRYIMVDEYQDTNQVQYEFVRLLAEKSK--NLCVVGDDDQSIYKFRGATIENIMSFE 271 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLD 547 +++ + L+ YR I AN I N + K L + K ++ D Sbjct: 272 KSYPNAKVIRLEQNYRSTKNILNAANAVISNNEERKGKTLWTENPEGDKIQIHTSSNEQD 331 Query: 548 A-------LLDKLSGYAKPEERILILARYHHMRP 574 +L++++ + +L R + Sbjct: 332 EAGFVATTILEQVAK-GRKYSDFAVLYRMNSQSN 364 Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 55/161 (34%), Gaps = 22/161 (13%) Query: 523 LKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAAT 582 L+K +K ++ L L + + L+ + + Sbjct: 489 LEKTGYIEALRGEKEEAETRIENINELASNLLKFQEENGEEATLSAFLEEVSLMTDIDNY 548 Query: 583 RWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEE 642 + MT+H++KG + V + G +EG L + EE Sbjct: 549 DETADTVVMMTMHSAKGLEFPVVFLPGFEEGIFP------------GLQAIYDPNEIQEE 596 Query: 643 RRLMYVALTRARHRVWAL----------FNKENPSPFVEIL 673 RRL YVA+TRA+ ++ L ++ PS F + Sbjct: 597 RRLCYVAITRAKESLYLLNADSRMLFGSTSRNRPSRFSLEI 637 >UniRef50_B1C8W2 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C8W2_9FIRM Length = 741 Score = 353 bits (906), Expect = 1e-95, Method: Composition-based stats. Identities = 99/413 (23%), Positives = 163/413 (39%), Gaps = 48/413 (11%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 S LN Q AV + LL+LAGAGSGKT ++ R +++ G A P +IL L F KAA Sbjct: 5 SMLNEKQQEAVTCVDGPLLILAGAGSGKTRTIIHRIAYIIENGYAKPWEILALTFTNKAA 64 Query: 255 EEMDERIRER--LHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM ERI T DI TFH++ I++ + S + + Sbjct: 65 GEMRERIDSMGIPFTSDIWMGTFHSICARILRIEGHNLGFTSNFSIYDDDDTKRVVKSIL 124 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 K + D E + S++ + + E Sbjct: 125 KDL-------------------------DISDKEFPVEGVKSQISLLKNNLETSDDYLEE 159 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRF 427 ++ +++ +A + ++ L + NA+DF L+ ++ K ++ Sbjct: 160 H-----DDFEGGYTE--ARIAQIYAEYQKRLLSSNAMDFDDLLLNMNILFAKCPEVLNKY 212 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + +K+ILVDE+QD + + A+++ L + + + GDD Q+IY + GA + F Sbjct: 213 KNRFKYILVDEYQDTNLSQYAIVSKLAEDHR--NICVCGDDDQSIYGWRGASIRNILEFE 270 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQL- 546 E+F + L+ YR I AN I+ N ++ K L + + +K L S L Sbjct: 271 EDFEDAAVIRLEQNYRCTKNILNAANGVIEHNQRRMGKTLFTDNDEGEKIKYLNANSDLE 330 Query: 547 ------DALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 + + P I IL R + E R QI T Sbjct: 331 ESSLISREIFCLNEYHGIPYSDIAILYRTNAQSRMLEEGLMRRNIPYQIVAGT 383 Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 22/101 (21%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 ++ MT+H +KG + + V + G++E FP + ED EERR Sbjct: 550 DSSKVLLMTLHNAKGLEFNIVFMPGMEENL--FPTYRAVN----------EDSEMEEERR 597 Query: 645 LMYVALTRARHRVWALFNKE----------NPSPFVEILKN 675 L YV +TRAR +++ + NPS F+ + + Sbjct: 598 LCYVGITRARKQLYMSSAESRRVYGRNEYRNPSRFLLEVPD 638 >UniRef50_C6A858 Superfamily I DNA and RNA helicase n=18 Tax=Bifidobacterium RepID=C6A858_BIFLB Length = 939 Score = 353 bits (905), Expect = 1e-95, Method: Composition-based stats. Identities = 113/521 (21%), Positives = 198/521 (38%), Gaps = 86/521 (16%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN QA+AV +LL+ AGAGSGKT VL R W+L + A P Q+L + F KAA Sbjct: 50 DLNEQQAQAVQYRGPALLIGAGAGSGKTRVLTRRIAWILTQFGAWPSQVLAITFTNKAAA 109 Query: 256 EMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM ER+ + + + TFH+ + I+++ +++ + S A E I Sbjct: 110 EMRERLGALIGGVADRMWVSTFHSACVRILRRDGEQIGLKSGFTIYDTADCERLIKLV-- 167 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 C++ K + R + +R+ + + + A A+ Sbjct: 168 -CADFNIDIKRF----------------------TPRSILARISDYKNQLTDASTALAQY 204 Query: 374 IASAPEEIRDLFSKRI----KLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR--- 426 +R +I + A + ++ L NAVDF LI + + +L Sbjct: 205 APDFKPGMRHYSFGQIGDPEPVYAVVYAEYQYRLALANAVDFDDLIVRTVELLRTQPHVA 264 Query: 427 --FISPWKHILVDEFQDISPQRAALLAALRKQNSQTT---------------LFAVGDDW 469 + +++ILVDE+QD + + L+ L ++ + VGD Sbjct: 265 EYYRHKFRYILVDEYQDTNHAQYVLVRELAGVDAHEPSDPMATEAGKSGPAWVTVVGDSD 324 Query: 470 QAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS 529 Q+IY F GA + F ++F + L+ YR I + AN I N + K L + Sbjct: 325 QSIYAFRGADIRNIQDFEKDFPDARTIMLEQNYRSTQTILDAANAVIAHNSARKPKKLWT 384 Query: 530 LTNGDKKAVTLLDES-------QLDALLDKLSGYAKPEERILILARYHHMRPASLEKAAT 582 K + ++ +L P + I+ R + + E Sbjct: 385 ALGEGDKIIGYAADTAQLEAHWIAQQILHLHEEKGLPYSDMAIMYRANAQSRSLEEGLIQ 444 Query: 583 RWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEE 642 Q+ T K + V +A++ P +D Sbjct: 445 AHIPYQLIGGT----KFYERREV---------------KDAIAYLQAIVNPADDINM--- 482 Query: 643 RRLMYV---AL-TRARHRVWALFNKENPSPF--VEILKNLD 677 RR++ V L TRA ++ N+ N + + +E L++++ Sbjct: 483 RRILNVPKRGLGTRAESQLTLFANEHNQTFWWAIEQLEDIE 523 Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 22/113 (19%) Query: 581 ATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDA 640 ++ MT+H +KG + V + G+++G+ FP + M+E + Sbjct: 623 GEGHDSGKVTLMTLHTAKGLEYPIVFLTGMEQGT--FPHSRAMENMDEL----------S 670 Query: 641 EERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVARK 683 EERRL YV +TRA+ R++ PS F++ + + + R+ Sbjct: 671 EERRLAYVGITRAKRRLYLTRAAVRAQWGRQSEMMPSQFLDEIPDSLIDWKRR 723 >UniRef50_UPI00016C0C66 ATP-dependent DNA helicase PcrA n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0C66 Length = 731 Score = 352 bits (904), Expect = 2e-95, Method: Composition-based stats. Identities = 93/408 (22%), Positives = 164/408 (40%), Gaps = 52/408 (12%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q +AV + LL+LAGAGSGKT VL R L+ + P +IL + F KAA E Sbjct: 3 LNDRQKKAVQHVNGPLLILAGAGSGKTRVLTQRIANLIENHQVQPWEILAITFTNKAAAE 62 Query: 257 MDERIRERLHTE---DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 M ER+ + + ++ TFH++ + I+++ + + +A ++ I + K Sbjct: 63 MRERMTNDVGEDVLKNMWISTFHSMCVRILRRFGESIGYTKYFTIYDSAEQKITIKDVMK 122 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 + N + E + S + + + A E Sbjct: 123 E-------------------------MNINEKEFQVGAVFSHISSKKNQFILPRQALKES 157 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FI 428 + E I +A + A++ L N +DF L+ ++ + Sbjct: 158 EGNFREHI----------IAKIYDAYQDKLYENNVMDFDDLLVNVCILFNNHPDVLSFYQ 207 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 + +K+ILVDE+QD + + L+ L ++ L VGDD Q+IY + GA +S F + Sbjct: 208 NKFKYILVDEYQDTNCVQYELIRQLADKHK--NLCVVGDDDQSIYGWRGADISNILEFEK 265 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLD- 547 +F L+ YR I E AN ++ N + K L + ++ + +++ Sbjct: 266 DFENTTIIKLEQNYRSTKNILEAANAVVKNNENRKPKVLFTDNETGEQIELYVVKNEYRE 325 Query: 548 ------ALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + LS Y + + IL R + EK ++ Sbjct: 326 ADVIAAQISKDLSEYRRDYKDFAILYRTNAQSRVLEEKMIQSSIPYRM 373 Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 20/99 (20%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 + MT+H+SKG + V + GL+EG FP+ S + EERR Sbjct: 544 NSNAVVLMTLHSSKGLEFPVVFMPGLEEGL--FPSHMSAS--------DEDKTKLEEERR 593 Query: 645 LMYVALTRARHRVWALFNKEN----------PSPFVEIL 673 L YV +TRAR +++ L +E PS F+ L Sbjct: 594 LCYVGITRAREKLYILQAEERMTYGQIKAVEPSRFIAEL 632 >UniRef50_Q6GFF2 ATP-dependent DNA helicase pcrA n=81 Tax=cellular organisms RepID=PCRA_STAAR Length = 730 Score = 352 bits (903), Expect = 2e-95, Method: Composition-based stats. Identities = 92/392 (23%), Positives = 160/392 (40%), Gaps = 51/392 (13%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + +N Q+ AV E LL++AGAGSGKT VL R +LL + SP +L + F KAA Sbjct: 6 NHMNTEQSEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNVLAITFTNKAA 65 Query: 255 EEMDERIRERLHTED--ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM ER+++ + + I TFH++ + I+++ + ++ I + I + Sbjct: 66 REMKERVQKLVGDQAEVIWMSTFHSMCVRILRRDADRIGIERNFTIIDPTDQKSVIKDVL 125 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 K N + R + + ++ AQ E Sbjct: 126 K-------------------------NENIDSKKFEPRMFIGAISNLKNELKTPADAQKE 160 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRF 427 +++A + ++ L A+DF LI I + E+ + Sbjct: 161 AT-----------DYHSQMVATVYSGYQRQLSRNEALDFDDLIMTTINLFERVPEVLEYY 209 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + +++I VDE+QD + + L+ L + L VGD Q+IY + GA + +F Sbjct: 210 QNKFQYIHVDEYQDTNKAQYTLVKLLASKFK--NLCVVGDSDQSIYGWRGADIQNILSFE 267 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKK-----AVTLLD 542 +++ E L+ YR I AN I+ N + K L + +K A+T D Sbjct: 268 KDYPEANTIFLEQNYRSTKTILNAANEVIKNNSERKPKGLWTANTNGEKIHYYEAMTERD 327 Query: 543 ES-QLDALLDKLSGYAKPEERILILARYHHMR 573 E+ + + K K + + IL R + Sbjct: 328 EAEFVIREIMKHQRNGKKYQDMAILYRTNAQS 359 Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 20/110 (18%) Query: 576 SLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVE 635 + + + MT+H++KG + V I+G++E FP + Sbjct: 537 LVADIDEADTENGVTLMTMHSAKGLEFPIVFIMGMEESL--FPHIRA--------IKSEG 586 Query: 636 DFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKN 675 D EERR+ YVA+TRA ++ PS F++ + Sbjct: 587 DHEMQEERRICYVAITRAEEVLYITHATSRMLFGRPQSNMPSRFLKEIPE 636 >UniRef50_A4XKK0 ATP-dependent DNA helicase PcrA n=2 Tax=Clostridia RepID=A4XKK0_CALS8 Length = 714 Score = 351 bits (900), Expect = 7e-95, Method: Composition-based stats. Identities = 99/393 (25%), Positives = 165/393 (41%), Gaps = 54/393 (13%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 LN Q AV++ E LLVLAGAGSGKT V+ R ++L G A P IL + F KAA Sbjct: 5 KELNKEQLEAVLSTEGPLLVLAGAGSGKTRVITYRIAYILNMGLAKPSNILAITFTNKAA 64 Query: 255 EEMDERIRERLHTE---DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 +EM ERI++ + E ++ TFH+ I++ + + + + E Sbjct: 65 DEMKERIKKLVSVESFAEMWVSTFHSACAKILRMEAHNIGFSNNFVIFDMQDRNQLLKEC 124 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 + + D+EKL+ + SRL +S + + Sbjct: 125 FTKLN--------------------------IDEEKLELKFVSRL---ISNFKNMLVGPS 155 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----R 426 ++ + R + + + + LK NA DF L++ I++ + + Sbjct: 156 DVYKEGNVDPR---------VVEVYRLYNKLLKEYNAFDFDDLLYYTIMLFKTNPDILEK 206 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + +K+ILVDE+QD + + L+ L +++ + VGDD Q+IY F GA + F Sbjct: 207 YQHKFKYILVDEYQDTNHAQFYLIYLLSQKHR--NICVVGDDDQSIYSFRGADVRNILEF 264 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL-----L 541 F + + L+ YR I AN I+ N + K L + N +K + Sbjct: 265 ENVFPDAKVIKLEKNYRSTKTILSAANEVIKNNRNRKPKRLWTDNNEGEKIYLYPAFDEV 324 Query: 542 DESQLDAL-LDKLSGYAKPEERILILARYHHMR 573 DE+ ++ + L I IL R + Sbjct: 325 DEANFVSMSIKNLIQGGIKPSEIGILYRTNAQS 357 Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 19/99 (19%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 + ++ MT+HA+KG + + V + GL+EG + E ++ L EERR Sbjct: 542 KEDKVMLMTVHAAKGLEFEVVFLTGLEEGLFPLLRSEGEIELQNEL---------EEERR 592 Query: 645 LMYVALTRAR----------HRVWALFNKENPSPFVEIL 673 L YVA+TRA+ RV+ F+ S F++ + Sbjct: 593 LCYVAITRAKRFLVLTYANNRRVFGRFSSRQKSSFIDEI 631 >UniRef50_C8WV10 UvrD/REP helicase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WV10_ALIAD Length = 705 Score = 350 bits (899), Expect = 9e-95, Method: Composition-based stats. Identities = 101/401 (25%), Positives = 167/401 (41%), Gaps = 54/401 (13%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNP Q AV LLV+AGAGSGKTSVL R +L+A + +IL + F KAA Sbjct: 10 GLNPEQRDAVTTTSGPLLVVAGAGSGKTSVLTRRIAYLIAHAGVAVHEILAITFTNKAAR 69 Query: 256 EMDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM RIR+ + D+ TFH++ + I+++ + ++ + E + Sbjct: 70 EMKTRIRDLIGPRADDLWMGTFHSICVRILRREADRLGYQPNFTILDSEDQEALV----- 124 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 Q ++ + + + R + R+ +W + GA + Sbjct: 125 -------------QQCLLDLGYDLKTHD-------ARSIKHRISQWKN-----EGATRVV 159 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRFI 428 S P ++ + +++ + L A NA+DF LI + +LE + ++ Sbjct: 160 NESNPSDL---------IADRVMELYNKRLFAANAMDFDDLIGHTVRLLEQNDDLRDKYQ 210 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 ++H+LVDE+QD + + LL L ++ L AVGD QAIY + GA F Sbjct: 211 EKFRHVLVDEYQDTNGIQFRLLRLLCAKHR--NLCAVGDADQAIYAWRGADSEHMLRFER 268 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL------LD 542 +F + + L YR I + AN I NP + K L S K + + + Sbjct: 269 DFPDAKIVVLTRNYRSTQEILDAANSVIAHNPRRRPKELRSTRGHGDKPLVVRLPDGAAE 328 Query: 543 ESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATR 583 + +++ E +L R + A EK R Sbjct: 329 AHYVAEAIEEHVRNGGRYEDCAVLYRANAQSRAIEEKLLER 369 Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 43/110 (39%), Gaps = 22/110 (20%) Query: 579 KAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFP 638 K + MT+HASKG + V +VG++EG FP A + Sbjct: 539 DKERDRGKGSVRLMTLHASKGLEFPVVFLVGMEEGL--FPHARSMD----------DPLR 586 Query: 639 DAEERRLMYVALTRARHR----------VWALFNKENPSPFVEILKNLDV 678 EER L YV LTRA R ++ PS F+ ++ V Sbjct: 587 IEEERNLCYVGLTRAMDRLVLTHAAWRTLYGQTVAREPSRFLAEIREDLV 636 >UniRef50_UPI00016B20E8 ATP-dependent DNA helicase PcrA n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B20E8 Length = 702 Score = 349 bits (896), Expect = 2e-94, Method: Composition-based stats. Identities = 99/414 (23%), Positives = 169/414 (40%), Gaps = 56/414 (13%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 S LNP Q +AV E LL+LAGAGSGKT L R ++++RG A P QIL + F KA Sbjct: 2 SDKLNPIQQKAVETTEGPLLILAGAGSGKTKTLTHRIAYIISRGLAWPSQILAVTFTNKA 61 Query: 254 AEEMDERIRERLHTE------DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 A EM ER+ L+ + TFH + + I++ + I S + + Sbjct: 62 AREMRERLGSMLNQDYTQRNFMPWMGTFHGICVKILRIEGGIINIPSNFVIYDESDKKGV 121 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 + + K + Q K AS +S + Sbjct: 122 VKQAMKSLNITDKQIK-----------------------------ASAASGIISAEKNKM 152 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-- 425 +IA+A + + + + K ++ + NA+DF L+ + + +L+ Sbjct: 153 NTPEIVIANARFPYQ-------QQIGEIYKMYEKLKRESNALDFDDLLLETVNLLKNHPE 205 Query: 426 ---RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 ++ +K+I++DE+QD + + +++ L N + + VGDDWQ+IY + GA Sbjct: 206 VRKKWQDHFKYIMIDEYQDTNAAQYLIVSLLT--NDKKNICVVGDDWQSIYSWRGADFRN 263 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKA---VT 539 F ++F + L+ YR I E A I +N + K + + N Sbjct: 264 ILNFEKDFSGAQIIKLEQNYRNTGAILEAAQNVIIKNNQRTDKKIWTAGNQGDPVEVYSA 323 Query: 540 LLDESQLDALLDKLSGYAKPE----ERILILARYHHMRPASLEKAATRWPKLQI 589 L D+S+ + + +S + + IL R + + R L I Sbjct: 324 LDDKSEAAWIANVISNKVESGEYNFDDFAILYRTNSQSYTIEQALNQRSIPLNI 377 Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 63/175 (36%), Gaps = 28/175 (16%) Query: 509 GEVANRFIQQN---PGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILI 565 ++ I N L+K ++ D + L+ L ++P I Sbjct: 466 LQIIRSEILNNTAPSDILEKVIDKTGYRDYILDGSPQAEDNNEYLNTLIDESRPYADI-- 523 Query: 566 LARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESI 625 + + + + + K + MT+HA+KG + V + G++EG + Sbjct: 524 --ETYLEEVSLMSSSDLQSEKGYVTLMTLHAAKGLEFPVVFMSGMEEGILPHSRTLDGNP 581 Query: 626 MEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFV 670 + EERRL YV +TRAR R++ + PS F+ Sbjct: 582 DD-----------LEEERRLCYVGMTRARERLYLSHSASRYQFNQRKYNDPSRFL 625 >UniRef50_B8FP41 ATP-dependent DNA helicase PcrA n=10 Tax=Firmicutes RepID=B8FP41_DESHD Length = 755 Score = 349 bits (896), Expect = 2e-94, Method: Composition-based stats. Identities = 98/405 (24%), Positives = 166/405 (40%), Gaps = 58/405 (14%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNP Q +AV + E LL+LAGAGSGKT VL R L+A+G P IL + F KAA+ Sbjct: 6 DLNPVQRQAVEHREGPLLILAGAGSGKTRVLTYRIAHLIAQG-VEPWHILAITFTNKAAQ 64 Query: 256 EMDERIRERLHTED--ITARTFHALALHIIQQGSKKVPIVSK-LENDTAARHELFIAEWR 312 EM +R+ + +E + TFH+ + I++ +P S+ + I Sbjct: 65 EMRDRVYSLVGSEGRGLWVATFHSACVRILRSEIGYLPGYSRSFVIYDSGDQLALIKSCM 124 Query: 313 KQC--SEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 K+ EKK + +++ E RR Sbjct: 125 KELNLDEKKFAPRAIEAVISDAKN------KLLTPEDFSRR------------------- 159 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG----- 425 +D F ++ + + + + L A NA+DF +I + + + Sbjct: 160 ----------AKDYFEQKAE---RVYELYLKKLLANNALDFDDIIMLTVRLFRENPEVLS 206 Query: 426 RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 ++ +++ILVDE+QD + + AL+ L K+ L VGDD Q+IY F GA + Sbjct: 207 QYQDKFRYILVDEYQDTNHAQYALVNLLAKKYR--NLCVVGDDDQSIYMFRGADVQNILD 264 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQ 545 F ++ E + L+ YR I + AN +Q N + +K L + + V + +++ Sbjct: 265 FERDYPEAKTLKLEQNYRSTKSILQAANSVVQNNTERKEKSLWTENEDGQPIVYYVADNE 324 Query: 546 LDA-------LLDKLSGYAKPEERILILARYHHMRPASLEKAATR 583 D + L+ + +L R + E+ Sbjct: 325 HDEARYMGERIQRLLNVEGRKFNEFAVLYRTNAQSRVIEERFMKE 369 Score = 89.4 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 60/146 (41%), Gaps = 22/146 (15%) Query: 538 VTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHAS 597 VT + + D + + + L + + + + MTIH++ Sbjct: 515 VTAEYDEKADNYETAVVQEGIEDALVPGLTGFLEQVSLVAQIDSLDQADDAVVMMTIHSA 574 Query: 598 KGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRV 657 KG + V + G++EG FP++ ++ AEERRL YVA+TRAR R+ Sbjct: 575 KGLEFPVVFLGGMEEGI--FPSSR----------SMLDPVLLAEERRLCYVAITRARERL 622 Query: 658 WALFNKE----------NPSPFVEIL 673 + + ++ PS F + + Sbjct: 623 YLAYAQQRMLYGRTQYNRPSEFFQEI 648 >UniRef50_C8XDJ8 ATP-dependent DNA helicase PcrA n=2 Tax=Actinomycetales RepID=C8XDJ8_NAKMY Length = 864 Score = 349 bits (896), Expect = 2e-94, Method: Composition-based stats. Identities = 95/413 (23%), Positives = 162/413 (39%), Gaps = 71/413 (17%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNP Q AV + LLV+AGAGSGKT VL R +LLA G A P +IL + F KAA Sbjct: 38 GLNPPQREAVEHRGAPLLVVAGAGSGKTRVLTRRIAYLLAVGGAQPGEILAITFTNKAAR 97 Query: 256 EMDERIRERLHTED--ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM +R+ + + + TFH++ + I++ + ++ + + A + Sbjct: 98 EMKDRVTDLVGGRGRSMWVSTFHSMCVRILRAEATQIGLKTTFTIYDQADSQRL------ 151 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 Q N + R LA+ + + + A Sbjct: 152 -------------------AQLVAGGLNIDTKKYPARMLAASISNLKNELIDPETA---- 188 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RFI 428 + S + L+A + + ++ L+A +A+DF LI Q + +L++ + Sbjct: 189 -------LERADSDQATLVAKVYQGYQERLRAASALDFDDLIMQTVFLLQRHPAVAEHYR 241 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQN---------------------SQTTLFAVGD 467 ++H+LVDE+QD + + L+ AL L VGD Sbjct: 242 RRFRHVLVDEYQDTNHAQYLLVKALVGGTADEQEVRTADGELVRAAASEVPPAELVVVGD 301 Query: 468 DWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 Q+IY F GA + F ++ + L+ YR I AN I +NP + K L Sbjct: 302 ADQSIYAFRGATIRNIVEFERDYPNAQTIMLEQNYRSTQTILSAANSVIARNPQRRAKNL 361 Query: 528 NSLTNGDKKAVTLLDESQLDA------LLDKLSGYAKP-EERILILARYHHMR 573 + G + + +++ D +D L + + + R + Sbjct: 362 WTAQGGGTRITGYVGDNEHDEAQFVGKEIDALVDAGEAVFGDVAVFYRTNSAS 414 Score = 84.4 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 46/120 (38%), Gaps = 22/120 (18%) Query: 564 LILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARE 623 L+LA + + + + + MT+H +KG + V + G ++G A Sbjct: 622 LLLAVLEQLSLVADADSVPDSAEGMVTLMTLHTAKGLEFPVVFVTGWEDGIFPHQRAL-- 679 Query: 624 SIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENP----------SPFVEIL 673 +D AEERRL YV +TRA R++ S F++ + Sbjct: 680 ----------GDDSELAEERRLAYVGITRAMKRLYVTRAMMRSAWGQPAANPASRFLDDI 729 >UniRef50_Q029V8 ATP-dependent DNA helicase, Rep family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q029V8_SOLUE Length = 788 Score = 349 bits (895), Expect = 2e-94, Method: Composition-based stats. Identities = 91/409 (22%), Positives = 163/409 (39%), Gaps = 46/409 (11%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 LN Q AV + + LL+LAGAGSGKT V+ R ++ P +L + F KAA Sbjct: 5 KGLNAQQREAVTHIDGPLLILAGAGSGKTRVITHRIAHIITSRHVPPSAVLAVTFTNKAA 64 Query: 255 EEMDERIRERLH----TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 +EM ER+ L T TFH+ + ++++ + V I + Sbjct: 65 KEMRERVAALLEDVPLDSMPTVSTFHSFCVRLLRRDGDPLARVRP-----GFTRRFTIYD 119 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 Q KA + E MQ+ R SR+ + Sbjct: 120 DEDQLQIIKAAYRTLGFDEKEFMQY--------------RAALSRISHAKNTK------- 158 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KG 425 + E RD +K + +A L + ++ AL+ NA+DF L+ +A+ +L + Sbjct: 159 ----VTPQEMFRDAVNKESEAVAALYEEYEKALRNANALDFDDLLLEAVRLLRTDDATRE 214 Query: 426 RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 + ++++DE+QD + + L+ L +Q+ + VGD+ Q+IY + GA + Sbjct: 215 SWNRRLSYVMIDEYQDTNRSQYELMRLLTEQHQ--NVCVVGDEDQSIYSWRGADIKNILD 272 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDK-----KAVTL 540 F +++ + L+ YR I A ++ N + K L + ++ + Sbjct: 273 FEKDYPRAKTIRLEQNYRSTKNILAAAGAVVENNKARKGKKLWTESDSGELLGLYAGYDS 332 Query: 541 LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 +E+ A + + P + + IL R + E K + Sbjct: 333 ENEALFIADTTEKYLASNPGDHVAILYRTNSQSRQIEEALRRYGRKYNV 381 Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 12/84 (14%) Query: 582 TRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAE 641 + + + MT+H +KG + V + G++ G FP + + E Sbjct: 546 SYDEQSPVTLMTLHNAKGLEFPLVFLSGMELGL--FPHSRSMNSEEALEEERRL------ 597 Query: 642 ERRLMYVALTRARHRVWALFNKEN 665 YV +TRAR ++ + K Sbjct: 598 ----CYVGMTRARKKLVLTWAKMR 617 >UniRef50_Q2RGX9 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria RepID=Q2RGX9_MOOTA Length = 729 Score = 349 bits (895), Expect = 2e-94, Method: Composition-based stats. Identities = 100/392 (25%), Positives = 157/392 (40%), Gaps = 55/392 (14%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV + LLVLAGAGSGKT VL R L+ G PE IL + F KAA+E Sbjct: 11 LNGPQQEAVKHRGTPLLVLAGAGSGKTRVLTYRVAALIQEG-VRPENILAVTFTNKAAQE 69 Query: 257 MDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M ER+ + + TFH+ + I+++ + + + + E K+ Sbjct: 70 MKERLEGLVGEAARGLWVSTFHSACVRILRREAHLLGYRPNFVIYDTDDQQAALKEVLKE 129 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 + D + R LA + + ++ Sbjct: 130 L-------------------------DLDDKKYPPRSLAQVISMAKNDLK---------- 154 Query: 375 ASAPEEIRD-LFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FI 428 PE D + R + + + ++ L+ NA+DF LI Q + + ++ + Sbjct: 155 --TPERFLDGAATFREQQQGQIYRRYQEKLRELNAMDFDDLIMQTVFLWQQNPLVLRYYQ 212 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 W+HILVDE+QD + + L+ L + L VGD Q IY + GA + AF E Sbjct: 213 QRWQHILVDEYQDTNHAQYILVRLLAGKGD--NLCVVGDPDQGIYGWRGADIGNILAFEE 270 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDK-----KAVTLLDE 543 +F L+ YR I + AN IQ N G+ +K L + + +A DE Sbjct: 271 DFPRARVILLEENYRSTRPILQAANAVIQHNEGRREKRLWTRRREGELLHLYRATDERDE 330 Query: 544 SQLDA--LLDKLSGYAKPEERILILARYHHMR 573 + A + + +P +L R H Sbjct: 331 GRFIAGEVYRRHQQEGRPFSDFAVLYRTHAQS 362 Score = 84.4 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 22/108 (20%) Query: 576 SLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVE 635 + ++ T + MT+H +KG + V + GL+EG FP + Sbjct: 539 LVAESDTYSGNAAVALMTMHTAKGLEFPVVFLAGLEEGV--FPHFRSLD----------D 586 Query: 636 DFPDAEERRLMYVALTRARHRVWAL----------FNKENPSPFVEIL 673 EERRL YV +TRAR ++ PS F++ + Sbjct: 587 PAEMEEERRLCYVGMTRAREVLYLTHAWTRNLYGSTMSNPPSRFLDEI 634 >UniRef50_Q28NL8 ATP-dependent DNA helicase, Rep family n=11 Tax=Rhodobacteraceae RepID=Q28NL8_JANSC Length = 817 Score = 348 bits (894), Expect = 3e-94, Method: Composition-based stats. Identities = 95/410 (23%), Positives = 155/410 (37%), Gaps = 52/410 (12%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNPAQ AV + +L+LAGAG+GKT L AR L++ G A P +IL + F KAA Sbjct: 33 GLNPAQIAAVNQLDGPVLMLAGAGTGKTRALTARIAHLMSTGTARPNEILAVTFTNKAAR 92 Query: 256 EMDERIRERLHTED---ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM R+ L TFHA+ + ++++ ++ + S Sbjct: 93 EMKTRVGHLLGQPAEGMPWLGTFHAICVKLLRRHAELAGLKSNFTILDTDDQTRL----- 147 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 M+ + D R L S +D W + + Sbjct: 148 --------------------MKQLIIAEEIDDKRWPARALGSIIDGWKNRALTPDKVPSA 187 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RF 427 L ++ LKA NA DF L+ I I + ++ Sbjct: 188 -----------DHGAFNHQGVKLYAQYQARLKALNACDFGDLLLHVIQIFQDNDDLLQQY 236 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 +++ILVDE+QD + + L L + VGDD Q+IY + GA++ F Sbjct: 237 QRWFRYILVDEYQDTNVAQYLWLRLLAA--GHKNICCVGDDDQSIYGWRGAEVGNILRFE 294 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD---ES 544 ++F L+ YR I A+ I N G+L K L + +K + + Sbjct: 295 KDFPGAHVVRLEQNYRSTGHILAAASGVIAGNTGRLGKTLWTDGEDGEKVRLIGHWDGDE 354 Query: 545 QLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTI 594 + + +++ K + A L +A+ + + F+TI Sbjct: 355 EARWIGEEIEAMGKGTRGM---EPIGPNSIAILVRASHQMRAFEDRFLTI 401 Score = 93.6 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 20/116 (17%) Query: 579 KAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFP 638 + ++ MT+HA+KG + V + G ++G FP+ +A L Sbjct: 588 DNEQDDQEPKVTLMTLHAAKGLEFPAVFLPGWEDGL--FPSQRSMDESGQAGL------- 638 Query: 639 DAEERRLMYVALTRARH----------RVWALFNKENPSPFVEILKNLDVPVARKP 684 EERRL YV +TRA RV+ + + PS F++ L V V P Sbjct: 639 -EEERRLAYVGITRAEEVCTISFAGNRRVYGQWQSQMPSRFIDELPEDHVEVLTPP 693 >UniRef50_C7HU69 ATP-dependent DNA helicase PcrA n=2 Tax=Anaerococcus RepID=C7HU69_9FIRM Length = 729 Score = 348 bits (892), Expect = 5e-94, Method: Composition-based stats. Identities = 88/411 (21%), Positives = 166/411 (40%), Gaps = 51/411 (12%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 ++ S LN Q AV++ + LLV+AGAGSGKT VL +L+ +P IL + F Sbjct: 1 MDLSNLNDKQKEAVLHDKGPLLVVAGAGSGKTRVLTTSIAYLIKEKNVNPVNILAITFTN 60 Query: 252 KAAEEMDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIA 309 KAA EM ERI + L + + TFH++ I++ K+ + + + Sbjct: 61 KAANEMKERISDLLDEDVSHLWIGTFHSICARILRMNINKIGYDNNFTIYDTNDQKTLVK 120 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 E N+ DD + L +S + + Sbjct: 121 EIINDL-------------------------NYKDDISPKEAL-----NLISYCKNKSIS 150 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR--- 426 E + + F + + + K ++ N++DF LI + + + + Sbjct: 151 PKEFLNI------NTFYAKQEEYYNIYKNYEKKKFEYNSLDFDDLILKTLELFAEDSNTL 204 Query: 427 --FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 + ++++ VDE+QD + + L+ + K + VGD Q+IY F GA ++ Sbjct: 205 KYYQDKFEYLFVDEYQDTNKSQYELIKFIGK--GHNNVRVVGDADQSIYSFRGADINNIL 262 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVT---LL 541 F ++F + + L+ YR S I VAN+ I+ N + +K L + N + + + Sbjct: 263 DFEKDFKDAKTIKLEENYRSTSNIINVANKLIKNNSERKEKNLWTSKNDGSEVLYKKSSV 322 Query: 542 DESQLDALLDKLSGYAKPE---ERILILARYHHMRPASLEKAATRWPKLQI 589 + + ++D+++ + + IL R + E ++ Sbjct: 323 ESEEGKFVIDEINSLLNDGYRLKDMAILYRMNAQSRIFEEYLMKNLLDYKV 373 Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 49/124 (39%), Gaps = 23/124 (18%) Query: 569 YHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEE 628 Y + T I MTIH++KG + +VG+ EG FP+ Sbjct: 528 YLENLSLLSDLDKTEDKDDSISLMTIHSAKGLEFKVCFVVGMDEGL--FPSKR------- 578 Query: 629 ALLPPVEDFPDAEERRLMYVALTRARHRVWALFN----------KENPSPFVEILKNLDV 678 +++ EERR+ YVA+TRA +++ PS F+ +++ Sbjct: 579 ----SIDEGNIEEERRICYVAITRAMEKLYLSSAEIRRQFGQPVYYKPSRFLNEVESSIK 634 Query: 679 PVAR 682 + + Sbjct: 635 KIDQ 638 >UniRef50_Q3A0S9 ATP-dependent DNA helicase PcrA n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A0S9_PELCD Length = 737 Score = 347 bits (890), Expect = 8e-94, Method: Composition-based stats. Identities = 91/401 (22%), Positives = 160/401 (39%), Gaps = 52/401 (12%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + LN Q +AV++ + LL+LAGAGSGKT L R +L+ + + P Q+L + F KAA Sbjct: 6 TSLNDCQRQAVLHEDGPLLILAGAGSGKTRTLTHRIAYLIQQQQVEPWQVLAVTFTNKAA 65 Query: 255 EEMDERIRERLHT-EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM ER++ + + + TFHA I+++ + + + I + Sbjct: 66 AEMRERLQSLVGNIDGLWISTFHAACARILRRDGEVLGYGRDFTIYDDQDQQRLIKDCLA 125 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 Q + K R +A+ +D+ + G E Sbjct: 126 QLRITEKDLK-------------------------PRAVATAIDQ----AKNRGLLPEEY 156 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRFI 428 I R + +A + + ++ L+ NA+DF L+ Q + + + + Sbjct: 157 IPG---------DHRGEQVARVYELYQKRLQQANALDFGDLLLQTVRLFREYSHIRDAYR 207 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 + H+LVDEFQD + + A++ AL L VGDD Q+IY + GA++ F Sbjct: 208 RRFAHLLVDEFQDTNQVQYAMVKALADDGRH--LCVVGDDDQSIYAWRGAEIGNILNFER 265 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKK------AVTLLD 542 +F L+ YR ++ I E A + N G+ K L + + L + Sbjct: 266 DFPGASVIRLEQHYRSSATILEAAGEVVACNIGRKGKTLWTDNPAGEPLTLEPLPDDLEE 325 Query: 543 ESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATR 583 + A + +L + + + R + E Sbjct: 326 ARFVAAEIARLRDAGRHLRDVAVFYRTNAQSRVLEETLVRE 366 Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 60/155 (38%), Gaps = 27/155 (17%) Query: 545 QLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADY 604 +L+ L L+G + + L Y + + ++ MT+HA+KG + Sbjct: 508 RLENLEQLLAGMEEHQATESSLQEYLEQVALVTDLDSYDTRLDRVTLMTLHAAKGLEFPV 567 Query: 605 VIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWAL---- 660 V + G++EG FP ++ EERRL YV +TRA +++ Sbjct: 568 VFMTGMEEGI--FPHGRAAGERDDV----------EEERRLCYVGMTRAMQKLYLTHARR 615 Query: 661 ------FNKENPSPFVEIL-----KNLDVPVARKP 684 + PS F+ + + P +KP Sbjct: 616 RRIYGDYQYNAPSRFLAEIPPHLMGDKPAPALQKP 650 >UniRef50_A4XBE9 ATP-dependent DNA helicase PcrA n=18 Tax=Actinomycetales RepID=A4XBE9_SALTO Length = 795 Score = 347 bits (890), Expect = 1e-93, Method: Composition-based stats. Identities = 90/400 (22%), Positives = 150/400 (37%), Gaps = 53/400 (13%) Query: 191 QVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFG 250 Q LN Q AV + LL++AGAGSGKT VL R +LLA + P +I+ + F Sbjct: 30 QALLDGLNGPQREAVTHAGSPLLIVAGAGSGKTRVLTHRIAYLLAARQVHPGEIIAITFT 89 Query: 251 RKAAEEMDERIRERLHTED--ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFI 308 KAA EM ER+ + + + TFH+ + I++ + + S A + Sbjct: 90 NKAAGEMKERVAQLVGPRARLMWVSTFHSACVRILRAEHEHAGLKSTFSIYDADDSRRLM 149 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 ++ D +R A L VS ++ Sbjct: 150 QLVAREL-----------------------------DLDPKRYPARGLAAQVSNLKNELV 180 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-- 426 E A A + +A ++ L+ +A+DF LI + +L+ Sbjct: 181 DPEEFAARAK-------GPNERALAEAYTLYQRRLREAHALDFDDLIMTTVHLLQSHPHV 233 Query: 427 ---FISPWKHILVDEFQDISPQRAALLAALRKQN---SQTTLFAVGDDWQAIYRFSGAQM 480 + ++H+LVDE+QD + + L+ L L VGD Q+IY F GA + Sbjct: 234 AETYRRRFRHVLVDEYQDTNHAQYVLIKELVSGTDGLDPAELCVVGDADQSIYAFRGATI 293 Query: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL 540 F +F + L+ YR I AN I +N + K L S V Sbjct: 294 RNILEFERDFTDARTILLEQNYRSTQTILNAANAVIDRNTSRKPKRLWSEAGTGDPIVGY 353 Query: 541 LDESQL---DALLDKLSGYAKPEE----RILILARYHHMR 573 + +++ D + ++ + + + R + Sbjct: 354 VADTEHTEADWVAREIDRLVDDGDTRPGDVAVFYRTNAQS 393 Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 65/184 (35%), Gaps = 31/184 (16%) Query: 505 NSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDE--SQLDALLDKLSGYAKPEER 562 + E + G L + SL D V L E S +++ G + ER Sbjct: 510 PEEVLEA----LLNRSGYLTELEESLDPQDAGRVDNLQELVSVAREYTERVEGLGEEGER 565 Query: 563 ILILARYHHMRPASLEKAATRWPKLQ---IDFMTIHASKGQQADYVIIVGLQEGSDGFPA 619 + + + + MT+H +KG + V + G+++G FP Sbjct: 566 ATVAGFLEQVALVADADQLPADDPEHQGVVTLMTLHTAKGLEFPVVFLTGMEDGV--FPH 623 Query: 620 AARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALF----------NKENPSPF 669 A ++ EERRL YV +TRAR R++ PS F Sbjct: 624 ART----------FGDNHELEEERRLAYVGITRARQRLYLSRAVTRSAWGQPAYNAPSRF 673 Query: 670 VEIL 673 +E L Sbjct: 674 LEEL 677 >UniRef50_Q0TN58 ATP-dependent DNA helicase PcrA n=12 Tax=Clostridium RepID=Q0TN58_CLOP1 Length = 751 Score = 347 bits (889), Expect = 1e-93, Method: Composition-based stats. Identities = 84/403 (20%), Positives = 160/403 (39%), Gaps = 52/403 (12%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 S LN Q A + +L+LAGAGSGKT VL R +++ + P IL + F KA Sbjct: 4 KSLLNKEQYEAATTIDGQVLILAGAGSGKTRVLTHRIAYMIEN-DIKPYNILAITFTNKA 62 Query: 254 AEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 A EM ER++ + ++ TFH+ + I+++ K+ ++ + I Sbjct: 63 AGEMRERVKSLVGEVANNMWISTFHSSCVRILRREIDKLGYSKDFTIYDSSDQKTLIKLV 122 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 K+ + + + ++ G A+ Sbjct: 123 MKELNINEKEITDL-----------------------------------EILGTIGKAKD 147 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR----- 426 + ++ + + + R +A ++ LK NA+DF LI + + + K Sbjct: 148 NIQSAQSFKKENEDNFRKNKIADAYLLYQKKLKENNALDFDDLIVKTVELFRKHNDVLEF 207 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + + +K+I++DE+QD + + L ++ + VGDD Q IY + GA + F Sbjct: 208 YQNKFKYIMIDEYQDTNKAQYEFAKLLAAKHK--NICVVGDDDQCIYAWRGADIRNILDF 265 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL------ 540 +++ E + L+ YR I E AN+ I+ N + K L + +K Sbjct: 266 EKDYPEAKVVKLEQNYRSKGNILEAANKVIKNNAERKFKILRTEQVEGEKISIHRAYSDK 325 Query: 541 LDESQLDALLDKLSG-YAKPEERILILARYHHMRPASLEKAAT 582 ++ + + + ++KL + +L R + E Sbjct: 326 MEAAFVVSEIEKLKNDNGYKYKDFAVLYRTNAQSRNFEEALRR 368 Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 35/93 (37%), Gaps = 22/93 (23%) Query: 591 FMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVAL 650 MT+H+SKG + V +VG++ G A E RRL YV + Sbjct: 553 LMTVHSSKGLEFPTVFLVGMENGIFPNAACFEHDN------------QMEEARRLCYVGI 600 Query: 651 TRARHRVWALFNKEN----------PSPFVEIL 673 TRA +++ + S F+ + Sbjct: 601 TRAEEKLYMTSAETRMIFGKTVAYGQSDFISEI 633 >UniRef50_A5CU47 ATP-dependent DNA helicase n=4 Tax=Actinobacteria (class) RepID=A5CU47_CLAM3 Length = 816 Score = 346 bits (888), Expect = 1e-93, Method: Composition-based stats. Identities = 101/426 (23%), Positives = 156/426 (36%), Gaps = 66/426 (15%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNP Q AVV +LL++AGAGSGKT VL R L+ EA P QIL + F KAA Sbjct: 37 GLNPEQREAVVYRGPALLIVAGAGSGKTRVLTHRIASLIESREAWPSQILAITFTNKAAA 96 Query: 256 EMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM ER+ L +E + TFH+ + I+++ ++ +A + I K Sbjct: 97 EMRERVESLLGQASEGMWISTFHSACVRILRREAEAFGFTQNFTIYDSADSRVLIKRIIK 156 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 Q ++ R+ + + + Sbjct: 157 QLDADTLGF-------------------------TVSSVSGRISKLKNELSDADTFARTA 191 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FI 428 + P E + + + + +L + NA DF LI Q + + + Sbjct: 192 NFNDPAE---------AMFVEIFRQYTRSLASANAFDFDDLIGQTVYLFRAFPKVAALYQ 242 Query: 429 SPWKHILVDEFQDISPQRAALLAALR-------------------KQNSQTTLFAVGDDW 469 ++H+LVDE+QD + + +L+ L +L VGD Sbjct: 243 RRFRHVLVDEYQDTNHAQYSLIRELTRAVAPEDVPVDTRMSTNGMGGIDGASLTVVGDSD 302 Query: 470 QAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS 529 Q+IY F GA + T F +F + + L+ YR I AN I N + K L + Sbjct: 303 QSIYAFRGADIRNITEFERDFPQSKVVLLEQNYRSTQNILTAANAVISNNFDRKDKKLWT 362 Query: 530 LTNGDKKAVTL-----LDESQLDA-LLDKLSGYAKPEERILILARYHHMRPASLEKAATR 583 K V DE+Q A + KL I + R + A E Sbjct: 363 SIGDGDKIVGFTGYSGHDEAQFVADEIQKLHEEGTAYSEIAVFYRTNAQTRALEEILIRS 422 Query: 584 WPKLQI 589 +I Sbjct: 423 AVPYRI 428 Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 22/110 (20%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 + MT+H +KG + D V + G++E + E AEERR Sbjct: 604 SSGTVSLMTLHTAKGLEYDSVFLTGVEEDLLPH------------RMSANEPGGPAEERR 651 Query: 645 LMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVARKP 684 L YV +TRAR R++ PS +++ + + + P Sbjct: 652 LFYVGITRARRRLFISLAMTRAQFGEVNVAMPSRYLQEIPAELIDWKQSP 701 >UniRef50_UPI000051001F putative ATP-dependent DNA helicase II n=1 Tax=Brevibacterium linens BL2 RepID=UPI000051001F Length = 850 Score = 346 bits (888), Expect = 1e-93, Method: Composition-based stats. Identities = 94/397 (23%), Positives = 161/397 (40%), Gaps = 54/397 (13%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + LNP Q AV + LL++AGAGSGKT+VL R + LA G A P ++L + F KAA Sbjct: 24 TGLNPRQREAVAHTGSPLLIVAGAGSGKTTVLTRRIAYALATGRAHPGEVLAITFTNKAA 83 Query: 255 EEMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 +EM ER+R + + TFH+ + I+++ +K + + S + + +++ Sbjct: 84 KEMAERVRSIVGPASRAMWVSTFHSSCVRILRREAKVLGMKSNFTIYDSQDAQRLVSQIL 143 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 K+ + R + R+ + ++ Sbjct: 144 KELGID-------------------------TKKYTPRSMLHRISNLKNDLQTPDDFIPR 178 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----F 427 A E ++A + K + L+ NA DF LI + + + + Sbjct: 179 ANNPADE-----------VLADVFKRYTSRLRLANAFDFDDLISETVHLFGAFPEVADFY 227 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTT----LFAVGDDWQAIYRFSGAQMSLT 483 ++HILVDE+QD +P + AL+ AL + L VGD Q+IY F GA + Sbjct: 228 RRRFRHILVDEYQDTNPAQYALIKALAGDGAGGATGAELTVVGDSDQSIYAFRGATVRNI 287 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDE 543 F ++F E L+ YR I + AN I N + K L + + V + E Sbjct: 288 MEFEKDFPNAETILLEQNYRSTQNILDAANAVISNNQDRKDKKLWTSEGTGETIVGWVAE 347 Query: 544 SQLDA---LLDK----LSGYAKPEERILILARYHHMR 573 ++ ++D+ + + R + Sbjct: 348 NEQAEARFIVDRVDELIDNEKYTYGDFAVFYRTNAQS 384 Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 22/98 (22%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 Q+ MT+H +KG + V + GL++G GFP A E +EERRL Y Sbjct: 634 QVTLMTLHTAKGLEFPVVFLTGLEDG--GFPHARSFENPSEL----------SEERRLAY 681 Query: 648 VALTRARHRVWALFNKEN----------PSPFVEILKN 675 V LTRAR R+ + PS F+ + Sbjct: 682 VGLTRARQRLIVTRAETRSMWGQPQYNPPSRFLSEIPE 719 >UniRef50_Q1IVP8 ATP-dependent DNA helicase, Rep family n=2 Tax=Bacteria RepID=Q1IVP8_ACIBL Length = 849 Score = 345 bits (886), Expect = 3e-93, Method: Composition-based stats. Identities = 94/407 (23%), Positives = 168/407 (41%), Gaps = 52/407 (12%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNP Q AV +L+LAGAGSGKT V+ R +L+ + SP+ IL + F KAA Sbjct: 6 KLNPQQREAVETVHGPVLILAGAGSGKTRVITYRIAYLIEKVGVSPDSILAMTFTNKAAA 65 Query: 256 EMDERIRERLHTE---DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM ER+ + TFH+ + ++++ + + I K R + I + Sbjct: 66 EMQERVEHLVGGRTLAKPVISTFHSFCVRVLRRDIEALQINGK-----GYRKDFAIYDES 120 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 Q S K+ K D + R + SR+ + Sbjct: 121 DQQSLVKSAMKRL---------------GIDDKQLTVRNVLSRISHAKNH---------- 155 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRF 427 + E +++ +A + K ++ L NA+DF L+ +L+ + R+ Sbjct: 156 -LLDPQEVYLQSGDPKVERIAQIYKVYESELAKANALDFDDLLLMTNKLLKTSTEVRERY 214 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 ++++L+DE+QD + + ++ AL + + AVGD+ Q+IY + GA + F Sbjct: 215 NRRFQYVLIDEYQDTNRPQYEIMRALA--GTLHNVCAVGDEDQSIYSWRGADIRNILEFE 272 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTN----------GDKKA 537 ++F E + L+ YR I E A+ ++ N + K L + D + Sbjct: 273 QDFPEAKIVRLEQNYRSTQNILEAASAVVKNNLKRKGKNLWTERMGGAKVGYYEAPDGEN 332 Query: 538 VTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRW 584 +L ++ L +R +L R + + E+A R+ Sbjct: 333 ESLFVADYINKYLMIAHDEDDEPKRAAVLYRTNS-QSRLFEEAMRRY 378 Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 29/114 (25%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 Q+ MT+HA+KG + V IVG++EG FP++ L+ P E EERRL Y Sbjct: 628 QVTLMTMHAAKGLEFPLVFIVGMEEGL--FPSSRT-------LMNPDEV---EEERRLCY 675 Query: 648 VALTRARHRVWA------------LFNKENPSPFVEIL-----KNLDVPVARKP 684 V +TRA + + + S F+ + +++ P + P Sbjct: 676 VGMTRAMRILVLSRARYRRRYGTDMPDASTASRFLSEVPPQLFEDIGSPQKKTP 729 >UniRef50_B7AA42 UvrD/REP helicase n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AA42_THEAQ Length = 701 Score = 345 bits (884), Expect = 4e-93, Method: Composition-based stats. Identities = 100/403 (24%), Positives = 168/403 (41%), Gaps = 46/403 (11%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 + S LN AQ +AV++ E LV+AGAGSGKT +V R +L+AR P +IL + F Sbjct: 8 EEALLSSLNEAQRQAVLHFEGPALVVAGAGSGKTRTVVHRVAYLIARRGVFPSEILAVTF 67 Query: 250 GRKAAEEMDERIRERL-HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFI 308 KAAEEM R++ + ++ TFHA AL I++ ++V + + Sbjct: 68 TNKAAEEMKARLKAMVRGAGELWVSTFHAAALRILRVYGERVGLKPGFVVYDEDDQTALL 127 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 E K+ + + + G Sbjct: 128 KEVLKELGLAAKPGP--------------------------------IKSLLDRAKNQGV 155 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG--- 425 ++ PE L R++ +L ++ AL+A+ A+DF ++ A+ +LE+ Sbjct: 156 PPEHLLLELPEFYAGLSRGRLQ---DVLHRYQEALRAQGALDFGDILLYALKLLEEDGEV 212 Query: 426 --RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 R + I VDE+QD +P + L + + L AVGD Q IY F A + Sbjct: 213 LKRVRKRARFIHVDEYQDTNPVQYRFTRLLAGE--EANLMAVGDPDQGIYSFRAADIRNI 270 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDE 543 F +++ + L+ YR I AN I +N +L+K L + G + E Sbjct: 271 LDFTQDYPKARVYRLEDNYRSTEAILRFANAVIVKNALRLEKTLRPVKKGGEPVRLFRAE 330 Query: 544 SQLDA---LLDKLSGYAKPEERILILARYHHMRPASLEKAATR 583 S D + ++++ P +R+ +L R + + A+R Sbjct: 331 SARDEARFVAEEIARLGPPFDRVAVLYRTNAQSRLLEQALASR 373 Score = 90.5 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 22/103 (21%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 ++ MT+H +KG + V +VG++EG ++ E EERRL Y Sbjct: 542 RVALMTLHNAKGLEFPVVFLVGVEEGLLPHRSSLSTQEGLE------------EERRLFY 589 Query: 648 VALTRARHRVWALFNKE----------NPSPFVEILKNLDVPV 680 V +TRA+ R++ + +E PS F+E + V Sbjct: 590 VGVTRAQERLYLSYAQEREIYGRLEPVRPSRFLEEVDEGLYEV 632 >UniRef50_Q1PY53 Strongly similar to ATP-dependent DNA helicase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY53_9BACT Length = 729 Score = 345 bits (884), Expect = 5e-93, Method: Composition-based stats. Identities = 81/387 (20%), Positives = 153/387 (39%), Gaps = 50/387 (12%) Query: 198 NPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEM 257 Q A+ + + LL++AGAGSGKT V+ R G+L++ G SP IL + F KAA EM Sbjct: 8 TDKQREAITHIDGPLLIVAGAGSGKTRVITRRIGYLMSEG-ISPYNILAITFTNKAANEM 66 Query: 258 DERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSE 317 ER+++ + + TFH + I+++ + + I Sbjct: 67 AERVKKFSSHKGMWVSTFHKMCSRILRKDIELLGYSKDFTIYDTVDQLNRIKSIMADLEI 126 Query: 318 KKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASA 377 A W + +++ ++ + R A Sbjct: 127 DTA---------------------HWKPRSIISSISNAKNKLIDHERFAATAS------- 158 Query: 378 PEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FISPWK 432 +++A + K + LK+ NA+DF L+ + + +L+ + +K Sbjct: 159 --------DIYHQMVAKIYKKYDTMLKSGNALDFDDLLIKTVELLKIRPDVLSSYQERFK 210 Query: 433 HILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGE 492 +IL+DE+QD + + A+ L ++ + GD Q+IY + GA + F +++ + Sbjct: 211 YILIDEYQDTNFVQYAISRLLAQKYK--NICVTGDPDQSIYGWRGADLRNIMDFEKDYPD 268 Query: 493 GERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDA---- 548 L+ YR I A+ IQ+N + +K + + +K T+ E++ Sbjct: 269 ARVVLLEQNYRSTKNILLAASSVIQKNKYRKQKEIWTENEHGEKIKTIHCENEHSEAEEI 328 Query: 549 --LLDKLSGYAKPEERILILARYHHMR 573 + L G I + R + Sbjct: 329 AKTIRALRGNGIKYTEIALFYRTNAQS 355 Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 35/96 (36%), Gaps = 22/96 (22%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + MT+H +KG + V I G++EG + E L YV Sbjct: 545 VTLMTLHTAKGLEFPVVFISGMEEGLLPHSESRISEEEIEEERR------------LCYV 592 Query: 649 ALTRARHRVWALFNKEN----------PSPFVEILK 674 +TRA R++ + K S F++ + Sbjct: 593 GITRAMKRLFLTYTKRRMRYGQLIPCVASRFLDEIH 628 >UniRef50_C1SJ11 DNA/RNA helicase, superfamily I n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJ11_9BACT Length = 703 Score = 345 bits (884), Expect = 5e-93, Method: Composition-based stats. Identities = 92/387 (23%), Positives = 154/387 (39%), Gaps = 54/387 (13%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN AQ AV E LLVLAGAG+GKT V+ R L+ IL + F KAA E Sbjct: 8 LNKAQYEAVTTTEGPLLVLAGAGTGKTRVITYRIAHLINNMRVPSRNILAVTFTNKAAGE 67 Query: 257 MDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M ERI + + E DI TFH++ L ++++ +K + I + K Sbjct: 68 MKERILKLVDYEDADIWIGTFHSICLRLLRRDPEKAGLEPGFGILDQDDRLATIRDIIKN 127 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 + D +K + ++++ + + + + Sbjct: 128 LN--------------------------IDHKKYPPK------KYMNTISTYKNTRPYVD 155 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FIS 429 PEE+ + + A + A++ LK + VDF ++ I + + + Sbjct: 156 GKKPEEL-------LHMFADVFAAYQQRLKDQKLVDFDDMLALTIRMFKNHPDTVGYYKE 208 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 +++ILVDE+QD + + L L + L VGDD Q+IY + GA + F Sbjct: 209 LFRYILVDEYQDTNDIQFLFLHLLAGLDG--NLCVVGDDDQSIYGWRGADIRNILEFDTI 266 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDK----KAVTLLDESQ 545 F + L YR +I + AN+ I+ N + K L + + V+ + Sbjct: 267 FKGTKIIRLLENYRSRPQILQAANKLIRNNKLRKGKDLVAARDEGGLVQVLPVSRETDEA 326 Query: 546 LDAL--LDKLSGYAKPEERILILARYH 570 + ++K I IL R + Sbjct: 327 EFVIDQVNKYLEEGVKGSEIAILYRTN 353 Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 22/95 (23%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + MTIH++KG + + V + GL+ G + E E RRL YV Sbjct: 541 VQLMTIHSAKGLEFESVFLTGLENGLFPLHGSLEEPDELEEE------------RRLCYV 588 Query: 649 ALTRARHRVWALFN----------KENPSPFVEIL 673 +TRA+ + + ++ S F++ + Sbjct: 589 GVTRAKQNLHMTYASTRMVYGKYMPQSRSVFLDEM 623 >UniRef50_C1F7R1 ATP-dependent DNA helicase, UvrD/REP family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7R1_ACIC5 Length = 943 Score = 344 bits (883), Expect = 6e-93, Method: Composition-based stats. Identities = 87/412 (21%), Positives = 168/412 (40%), Gaps = 63/412 (15%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNP Q V N + +L+LAGAGSGKT V+ R +L+ +P+ IL + F KAA+ Sbjct: 7 KLNPQQRAGVENVDGPVLILAGAGSGKTRVITHRIAYLIQERGVAPDSILAVTFTNKAAK 66 Query: 256 EMDERIRERLHTE---DITARTFHALALHIIQQGSKKV-----PIVSKLENDTAARHELF 307 EM ER+ + TFH+ + ++++ + + + + + Sbjct: 67 EMAERVDALIGHSTLAKPVLATFHSFCVRMLRRDIEALRIGNEGLTKTFAIYDESDQQSL 126 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 + + ++ D + R + S++ + M Sbjct: 127 VKQIMRR-------------------------MGLDDKQLTPRVVLSKISWAKNHM---- 157 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE---- 423 E + +A + +A++ L+ NA+DF L+ +A+ +L+ Sbjct: 158 -------IDPQEYYLQSSDPVAERVAHIFEAYRKDLRKNNALDFDDLLLEAVRLLKSSAE 210 Query: 424 -KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + R+ ++++L+DE+QD + + L+ L S+ + VGD+ Q+IY + GA + Sbjct: 211 VRERYNRRYQYLLIDEYQDTNRPQYELMKLLA--GSRHNVCVVGDEDQSIYSWRGADIRN 268 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTN---------- 532 F ++F + L+ YR I E A + +N + K L + Sbjct: 269 ILEFEKDFPNAQTIRLEQNYRSTQVILEAAGAVVSRNEQRKGKSLWTSREGGSLIGFYEA 328 Query: 533 GDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRW 584 D + L + L K +G + + R +L R + + +E+A R+ Sbjct: 329 PDGENEALFIADSIQKYLRK-AGESAEQPRAAVLYRTNS-QSRLVEEALRRY 378 Score = 78.6 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 44/114 (38%), Gaps = 24/114 (21%) Query: 572 MRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALL 631 A + ++ MT+HA+KG + V++ G++EG FP + Sbjct: 672 DHAALVSDTDQFDADARVTLMTLHAAKGLEFPMVVLAGMEEGL--FPHSRT--------- 720 Query: 632 PPVEDFPDAEERRLMYVALTRARHRVWALFNKEN------------PSPFVEIL 673 + EERRL YV LTRA + + PS F+E + Sbjct: 721 -LTDPNQMEEERRLCYVGLTRAMDSLILTRARYRRRYGNDMPEASTPSRFLEEI 773 >UniRef50_B5K795 UvrD/REP helicase n=5 Tax=Rhodobacterales RepID=B5K795_9RHOB Length = 837 Score = 343 bits (881), Expect = 9e-93, Method: Composition-based stats. Identities = 104/427 (24%), Positives = 167/427 (39%), Gaps = 57/427 (13%) Query: 179 EAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGE 238 AM + D+F LNPAQ +AV +L+LAGAG+GKT L R L+A G Sbjct: 27 RAMAPPHVDYFE-----GLNPAQRQAVETLNGPVLMLAGAGTGKTKALTCRIAHLMATGG 81 Query: 239 ASPEQILLLAFGRKAAEEMDERIRERLHTED---ITARTFHALALHIIQQGSKKVPIVSK 295 A P++IL + F KAA EM RI TFHA+ + ++++ ++ V + S Sbjct: 82 ARPDEILAVTFTNKAAREMMNRIGGLTQGASDGMRWLGTFHAICVKLLRRHAELVGLKSN 141 Query: 296 LENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASR 355 + + + S +E +W R LA Sbjct: 142 FTILDTDDQLRLLKQLIRASS-------------IDEKRWP------------PRMLAGI 176 Query: 356 LDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLI 415 +D W + +A A P + + L A++ LK NA DF L+ Sbjct: 177 IDGWKN--------KAWTPAQVPVGESSAYDDKG---IDLYAAYQHRLKELNACDFGDLL 225 Query: 416 HQAIVILEKGR-----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQ 470 + I + + +K+ILVDE+QD + + L L + + VGDD Q Sbjct: 226 LHMVTIFQTHADILATYQRWFKYILVDEYQDTNVAQYLWLRLLAQ--GHKNICCVGDDDQ 283 Query: 471 AIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSL 530 +IY + GA++ F ++F L+ YR I A I N +L K L + Sbjct: 284 SIYGWRGAEVGNILLFEKDFPGAHVVRLEQNYRSTGHILGAAAGVIDANKDRLGKTLFTD 343 Query: 531 TNGDKKAVTLLD---ESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKL 587 +K + E + + + + + L A L +A+ + Sbjct: 344 GEDGEKVRLIGHWDGEEEARWIGEDIESMQRGTRG---LDAMPLNSMAILVRASHQMRSF 400 Query: 588 QIDFMTI 594 + F+TI Sbjct: 401 EDRFLTI 407 Score = 92.1 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 53/145 (36%), Gaps = 21/145 (14%) Query: 550 LDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVG 609 L+ L K E L + ++ A ++ MT+H +KG + V + G Sbjct: 579 LENLKELVKALENFDSLQGFLEHISLIMDNAKDE-EDDKVTIMTLHGAKGLEFPSVYLPG 637 Query: 610 LQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN---- 665 ++G + ES ++ EERRL YV +TRA F Sbjct: 638 WEDGLFPSQRSMDESGLKGL----------EEERRLAYVGITRAEKHCTISFTSSRLVYG 687 Query: 666 ------PSPFVEILKNLDVPVARKP 684 PS F++ L +V V P Sbjct: 688 QWQSQMPSRFIDELPEENVEVLTPP 712 >UniRef50_C7QGW9 ATP-dependent DNA helicase PcrA n=8 Tax=Bacteria RepID=C7QGW9_CATAD Length = 806 Score = 343 bits (881), Expect = 9e-93, Method: Composition-based stats. Identities = 100/469 (21%), Positives = 176/469 (37%), Gaps = 84/469 (17%) Query: 138 ALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEAMLTEYADFFRQVESSPL 197 LP P EE D RE W W ++ E A + ++ L + L Sbjct: 20 TLPEPPAWAEESDAEREGWD---GW-EEPEDAWVPPEESAAARKLLD-----------GL 64 Query: 198 NPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEM 257 N Q AV++ LL++AGAGSGKT VL R +L+ A P IL + F KAA EM Sbjct: 65 NEPQREAVLHAGGPLLIIAGAGSGKTRVLAHRIAYLVGERHAHPGSILAITFTNKAAAEM 124 Query: 258 DERIRERLHTED--ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQC 315 +R+ E + + TFH+ + I++ +K + S A + + + Sbjct: 125 RQRVEELVGPRARLMWVSTFHSACVRILRAQAKTAGLPSNFSIYDTADSQRLMTMVLRDL 184 Query: 316 SEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIA 375 + R + ++ + + + H + Sbjct: 185 -------------------------EIDPKKTTPRSMLGQISKLKNELVDHDTFSSRAQT 219 Query: 376 SAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRFISP 430 A + +A + + + L A A+DF +I + +L+ + Sbjct: 220 EA-----------ERQLAQVYRLYADRLTAAKALDFDDIIMTTVHLLQAFPMIAEHYRRR 268 Query: 431 WKHILVDEFQDISPQRAALLAALRKQNSQTT-------------------LFAVGDDWQA 471 +++ILVDE+QD + + L+ L Q+ + T L VGD Q+ Sbjct: 269 FRNILVDEYQDTNTAQYQLVKELVGQHEKRTVDGDLVRPGLNTEDLPPAELCVVGDADQS 328 Query: 472 IYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLT 531 IY F GA + F ++ + + L+ YR I AN I+ N G+ K L + + Sbjct: 329 IYAFRGATIRNIIEFERDYPDAKVIKLEQNYRSTQTILTAANAVIENNKGRRAKNLWTDS 388 Query: 532 NGDK---KAVTLLDESQLDALLDKLSGYAKPEER----ILILARYHHMR 573 K V + S+ + +++ + +E + + R + Sbjct: 389 GDGKLITGYVADDEHSEAQFVAEEIDRLSDAKETTYGGVAVFYRTNAQS 437 Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 22/101 (21%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 + MT+H++KG + V + G+++G FP + EERRL Y Sbjct: 630 MVTLMTLHSAKGLEFPVVFLTGMEDGV--FPHMR----------SMGDKKEMEEERRLAY 677 Query: 648 VALTRARHRVWALFN----------KENPSPFVEILKNLDV 678 V +TRAR +++ + PS F+ + V Sbjct: 678 VGITRAREQLYVSRSVYRSAWGAPQYNPPSKFLGEIPEPLV 718 >UniRef50_C1XMD9 ATP-dependent DNA helicase, Rep family n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XMD9_MEIRU Length = 706 Score = 343 bits (881), Expect = 9e-93, Method: Composition-based stats. Identities = 98/404 (24%), Positives = 167/404 (41%), Gaps = 46/404 (11%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 S LNP+Q AV++ E LV+AGAGSGKT +V R +LL P +IL + F KAA Sbjct: 6 SSLNPSQQEAVLHFEGPALVVAGAGSGKTRTVVHRIAYLLRERRVYPAEILAVTFTNKAA 65 Query: 255 EEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM ER+ + + D+ TFHA A+ I++ + V + + E Sbjct: 66 GEMKERLEKMVGRPARDLWVSTFHAAAVRILRTYGEYVGLRPGFVIYDEDDQNTLLKEVL 125 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 K+ E +A+ +R + ++ G AE Sbjct: 126 KEL-ELEAKPGPFRAM-------------------------------IDRIKNRGAGLAE 153 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRF 427 + AP+ I + A + + ++ L+ + A+DF+ L+ I + E+ + Sbjct: 154 YMREAPDFIGGVPKD---AAAEVYRKYQSGLRMQGALDFNDLLLLTIELFEQHPEVLHKV 210 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + I VDE+QD +P + L L + L VGD Q+IY F A ++ F Sbjct: 211 QQRARFIHVDEYQDTNPVQYKLTRLLAGERP--NLMVVGDPDQSIYGFRSADINNILDFT 268 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKA--VTLLDESQ 545 +++ L+ YR +S I VAN I++N +L+K L G + + + Sbjct: 269 KDYPGARVIRLEENYRSSSSILRVANAVIEKNALRLEKVLRPTRPGGEPVRLYRAPNARE 328 Query: 546 LDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 A + + ++I +L R + E +++ Sbjct: 329 EAAFVAREIVKLGNFQQIAVLYRTNAQSRLLEEHLRRANVPVRL 372 Score = 86.3 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 35/170 (20%), Positives = 66/170 (38%), Gaps = 30/170 (17%) Query: 514 RFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMR 573 R ++Q + + V L + D ++ + + + + A+ + Sbjct: 475 RVLEQTGFREALKQEPDGEDRLQNVEELLRAAQDWEEEEGGSLSDFLDSVALTAKAEEPQ 534 Query: 574 PASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPP 633 + +A + MT+H +KG + V +VGL+E P +E+ Sbjct: 535 GDAPAEA--------VTLMTLHNAKGLEFPTVFLVGLEENL--LPHRNSLHRLEDL---- 580 Query: 634 VEDFPDAEERRLMYVALTRARHRVWALFNKE----------NPSPFVEIL 673 EERRL YV +TRA+ R++ + +E PS F+E + Sbjct: 581 ------EEERRLFYVGITRAQERLYLSYAEERETYGKREYTRPSRFLEDI 624 >UniRef50_B4UKQ6 UvrD/REP helicase n=4 Tax=Anaeromyxobacter RepID=B4UKQ6_ANASK Length = 797 Score = 343 bits (879), Expect = 2e-92, Method: Composition-based stats. Identities = 98/396 (24%), Positives = 162/396 (40%), Gaps = 52/396 (13%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 LN AQ AV++ + LLVLAGAGSGKT V+V R L+ P +L + F KAA Sbjct: 14 QDLNDAQREAVLHDDGPLLVLAGAGSGKTRVIVHRIARLVRDRGVVPWHVLAVTFTNKAA 73 Query: 255 EEMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM ER+ L ++ +TFHA +++ + + + + Sbjct: 74 GEMRERLERLLGPLARELWVQTFHAFGARFLRREAARAGLSPSFAIYDDDDQLRLVKGLL 133 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 + + + RQ L S++DRW + + A+ + Sbjct: 134 SELGLDEGEGLTPRQVL------------------------SQIDRWKN--QALRAAEVK 167 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RF 427 + PE R + ++ AL AVDF L+ + + +LE+ R+ Sbjct: 168 VAGLDPETAR---------AKEVYHRYEQALARAGAVDFGDLLLRPVRLLEEDAALRARW 218 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 ++++LVDEFQD +P + LL L + + VGDD QAIYR+ GA +S F Sbjct: 219 AGRFRYLLVDEFQDTNPVQYRLLQLLT--GPRRNVCVVGDDDQAIYRWRGADVSNILGFD 276 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLD 547 +F + L+ YR I + A+ I + + +K L + + + LL Sbjct: 277 GDFPGTKVVKLEQNYRSTRTILDAAHAVISRARRRREKRLWTESGAGAP-LALLVGEDEH 335 Query: 548 ALLDKL-------SGYAKPEERILILARYHHMRPAS 576 A +++ G + I +L R + Sbjct: 336 AEAERIARAVAAERGRGTSGDEIAVLYRTNAQSRPL 371 Score = 85.9 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 20/116 (17%) Query: 572 MRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALL 631 + A L +A P+ ++ MT+HA+KG + + V + G+++G+ + + Sbjct: 553 EQIALLGEADAATPEGRVALMTLHAAKGLEFEAVFLAGMEDGTLPYERPWADQ------T 606 Query: 632 PPVEDFPDAEERRLMYVALTRARHRVWA--------------LFNKENPSPFVEIL 673 D EERRL YV +TRA+ R+ + PS F+ L Sbjct: 607 SSERDESLDEERRLCYVGMTRAKRRLTISLARRRIGYGENGPSYRNMEPSRFLRDL 662 >UniRef50_Q9CD72 ATP-dependent DNA helicase pcrA n=26 Tax=Actinomycetales RepID=PCRA_MYCLE Length = 778 Score = 343 bits (879), Expect = 2e-92, Method: Composition-based stats. Identities = 93/407 (22%), Positives = 170/407 (41%), Gaps = 57/407 (14%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNP Q +AVV+ LL++AGAGSGKT+VL R +L+A QIL + F KAA Sbjct: 20 GLNPQQRQAVVHEGSPLLIVAGAGSGKTTVLARRIAYLIAARSVGVSQILAITFTNKAAA 79 Query: 256 EMDERIRERLH---TEDITARTFHALALHIIQQGSKKV-PIVSKLENDTAARHELFIAEW 311 EM ER+ + + TFH+ + I++ + + + S Sbjct: 80 EMRERVARLVGDHTGPSMWVSTFHSTCVRILRNQASLIGGLNSNFSIYDVDD-------- 131 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 ++ Q + ++M + + R +A+ + + + A A Sbjct: 132 ----------SRSLLQMIGQDMGLDIKRYS-------PRLMANAISNLKNELIDAESAVA 174 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGR 426 + + + +A + ++ L+ NA+DF LI + + IL+ Sbjct: 175 NLSSDT--------DDLARTVATVYGEYQRRLRTANALDFDDLIGETVGILQAFPQIAEH 226 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTT--------LFAVGDDWQAIYRFSGA 478 + ++H+LVDE+QD + + L+ L ++ + L VGD Q+IY F G+ Sbjct: 227 YRRRFRHVLVDEYQDTNHAQYVLVRELVGHGARNSPDDMPPGELCVVGDADQSIYAFRGS 286 Query: 479 QMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAV 538 +S F ++ + L+ YR I AN I +N G+ K L + + V Sbjct: 287 TISNIEDFERDYPDTTTILLEQNYRSTQNILSAANSVIARNFGRRDKRLWTDAGKGELIV 346 Query: 539 TLLDESQLDA------LLDKLSGYAK-PEERILILARYHHMRPASLE 578 + +++ D +D L G + + + +L R +++ + E Sbjct: 347 GYVSDNEHDEAKFIADEIDALVGGGEITYDDVAVLYRANNLSRSLEE 393 Score = 82.4 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 22/95 (23%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + MT+HA+KG + V + G ++G + + +EERRL YV Sbjct: 600 VTLMTLHAAKGLEFPVVFVTGWEDGMLPH------------MRTLGDPTELSEERRLAYV 647 Query: 649 ALTRARHRVWALFNKEN----------PSPFVEIL 673 +TRAR R++ S F+ + Sbjct: 648 GITRARQRLYLSRAITRSSWGQPILNPESRFLREI 682 >UniRef50_C5NYN7 ATP-dependent helicase PcrA n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYN7_9BACL Length = 727 Score = 342 bits (876), Expect = 4e-92, Method: Composition-based stats. Identities = 91/392 (23%), Positives = 163/392 (41%), Gaps = 51/392 (13%) Query: 198 NPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEM 257 N Q +A++ E +++V+AGAGSGKT VL R +L++ IL + F KAA+EM Sbjct: 8 NDNQLKAILKTEGAVMVIAGAGSGKTRVLTNRIAYLISEKNILENNILAITFTNKAAKEM 67 Query: 258 DERIRERLHTED--ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQC 315 ERI + I TFH++ + I++Q + + + + I + Sbjct: 68 KERIYALVGETSKYIWINTFHSMCVRILRQHIELLGYNKNFTILDTSEQKSIIKNIVRSL 127 Query: 316 SEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIA 375 + + + + +++ + VS+ +M ++ Sbjct: 128 DL---------------------SEDAYQPANVLKIISNAKNSLVSVKKMREQSRF---- 162 Query: 376 SAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FISP 430 +K +A + ++ LK + +DF L+ + IV+ +K + + Sbjct: 163 -----------GFMKNVAEIYAHYQSYLKKNSVLDFDDLMLKTIVLFKKFPEVLAIYQNQ 211 Query: 431 WKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENF 490 +++I VDE+QD + + L+ L + + VGDD Q+IY + GA F ++F Sbjct: 212 FQYIHVDEYQDTNVIQYRLIKMLSAVHK--NVCVVGDDDQSIYSWRGACSDNIINFEKDF 269 Query: 491 GEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALL 550 + E LD YR NS I + AN I+ N + +K L S G K + D Sbjct: 270 DDVELVFLDQNYRSNSTILDAANAVIKNNTDRKEKELWSENKGGGKISVYAASNDKDETD 329 Query: 551 D------KLSGYAKPEERILILARYHHMRPAS 576 D +L + I IL R +++ Sbjct: 330 DIAKKILELKKEGIDYKDIAILYRANYLSRQM 361 Score = 88.2 bits (217), Expect = 8e-16, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 61/154 (39%), Gaps = 24/154 (15%) Query: 539 TLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAA------TRWPKLQIDFM 592 T+L ES ++ ++ + + + + + + + Sbjct: 488 TMLKESNDPYAESRIENISELVSSAKQFSSMNDSLIDFISEMSLTSDSDDENQEDAVVLS 547 Query: 593 TIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTR 652 T+HASKG + V I+GL+E FP+ + +A E EERRL YVA+TR Sbjct: 548 TVHASKGLEYKVVFIMGLEENL--FPS------IRDAESSADEKNKMEEERRLAYVAITR 599 Query: 653 ARHRVWALFN----------KENPSPFVEILKNL 676 A+ R++ + S F++ + N Sbjct: 600 AKERLFMSYANRRMQFGSIKMNKRSRFLDEVPNK 633 >UniRef50_D0BN23 ATP-dependent DNA helicase PcrA n=5 Tax=Firmicutes RepID=D0BN23_9LACT Length = 755 Score = 341 bits (875), Expect = 5e-92, Method: Composition-based stats. Identities = 83/398 (20%), Positives = 156/398 (39%), Gaps = 51/398 (12%) Query: 198 NPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEM 257 N Q AV + + LL++AGAGSGKT VL R ++LA E P IL + F KAA EM Sbjct: 2 NDRQKEAVQHTQGPLLIMAGAGSGKTRVLTHRMAYILAEEEVHPWNILAITFTNKAAREM 61 Query: 258 DERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQC 315 ER+ + + ED+ TFH++ + I+++ + + + + + K+ Sbjct: 62 KERVSQLVGPQAEDMWVSTFHSMCVRILRRDIELLGYQRSFTICDPSEQQTAMKRILKKL 121 Query: 316 SEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIA 375 + ++ R + +R+ + + + Sbjct: 122 -------------------------DIDSEKYDYRMILNRISQAKNDLE----------- 145 Query: 376 SAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FISP 430 E + +++A + ++ L +DF LI + + +K + Sbjct: 146 DVEEFSKKYTGYVEQIIAKCYREYQKELAKSMTLDFDDLIMLTVQLFQKHPETLQYYQQK 205 Query: 431 WKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENF 490 +++I VDE+QD + + L+ L K+ + VGD Q+IY + GA MS F +++ Sbjct: 206 FQYIHVDEYQDTNHAQYRLVTMLAKKFK--NICVVGDADQSIYGWRGADMSNILEFEKDY 263 Query: 491 GEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL---LDESQLD 547 + L+ YR I + AN I+ N + K L + + ++ + Sbjct: 264 QNAKVVLLEQNYRSTKTILQAANHVIENNFNRKVKKLWTENEEGQPITYYRAQSEQDEGR 323 Query: 548 ALLDKLSGY---AKPEERILILARYHHMRPASLEKAAT 582 +L ++ + IL R + E Sbjct: 324 YVLSQIQSLLRDGYHYDDFAILYRTNAQSRVMEENLLK 361 Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats. Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 21/99 (21%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 + MT+HA+KG + V I+GL+EG FP+ +++ +D EERRL Y Sbjct: 546 MVTLMTLHAAKGLEFPVVFIIGLEEGI--FPS-------LRSIMENGDDV--EEERRLAY 594 Query: 648 VALTRARHRVWAL----------FNKENPSPFVEILKNL 676 V +TRA +++ PS F+ + Sbjct: 595 VGITRAEQKLFLTNAYSRLLYGRTQTNRPSRFLLEIGED 633 >UniRef50_C7H111 ATP-dependent DNA helicase PcrA n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H111_9FIRM Length = 753 Score = 341 bits (875), Expect = 5e-92, Method: Composition-based stats. Identities = 99/410 (24%), Positives = 168/410 (40%), Gaps = 59/410 (14%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 LN Q + V E LLVLAGAGSGKT ++ R +L+ P+ IL + F KAA Sbjct: 15 KSLNDMQKQGAVTTEGPLLVLAGAGSGKTKMMTHRMAYLILEKNVDPQNILAVTFTNKAA 74 Query: 255 EEMDERIRERLHTE-----DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIA 309 EM +R +H+ + +TFHA L I++ + + TA+ + + Sbjct: 75 NEMKQRAEFLIHSRGRSLKGLWIKTFHATCLAILKNHAGALGYGENFLIYTASDQKAAVK 134 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 K+C E + S + + S Sbjct: 135 RAIKEC-------------------------EISPKEYPVKMFTSFISKCKSQK------ 163 Query: 370 QAEMIASAPEEIRDLFSK--RIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR- 426 P+E+ D F + ++ + +A++ LKA NA+DF L+ +++ K Sbjct: 164 ------IVPDEVFDYFDDSFKTQISQQVYEAYQNVLKANNAMDFDDLLLNTVILFSKYPD 217 Query: 427 ----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + +K+I+VDE+QD S + L+ L + + VGDD Q IY + GA + Sbjct: 218 ILKIYAERFKYIMVDEYQDTSSLQFELINKLA--HVHKNICVVGDDDQCIYEWRGATIEN 275 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD 542 +F + + + L+ YR I + A+ I N + +K L + + +K + Sbjct: 276 ILSFEKVYKGTKIIKLERNYRSTKNILDAAHAVISNNSKRKEKKLWTGSVEGEKISIEVY 335 Query: 543 ESQLDA---LLDKLSG----YAKPEERILILARYHHMRPASLEKAATRWP 585 E+ ++DK+ K + I IL R + + E+A RW Sbjct: 336 ENAHAEAEFIVDKIRQAVAEEGKTYKDIAILYRNNS-QSRLFEEALKRWD 384 Score = 96.7 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 78/215 (36%), Gaps = 34/215 (15%) Query: 476 SGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDK 535 GA+ F + + LD R ++ ++I + G +K + T Sbjct: 469 RGAE-----EFIKMIKHAQDMLLDENTRISN-----VLKYIIETSGYERKLKLADTLESD 518 Query: 536 KAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIH 595 + + E L A + G + ++ L L+ + + + MT+H Sbjct: 519 AKLENIYE--LVASVADREGSSAGDDEKLTLSAFLEEIALISDVDNHDETADAVVLMTLH 576 Query: 596 ASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARH 655 +SKG + + V I G++EG FP+ + EERRL YV TRA+ Sbjct: 577 SSKGLEFNVVFIPGMEEGI--FPSGQGDD----------NPGKIEEERRLCYVGFTRAKE 624 Query: 656 RVWALFNK----------ENPSPFVEILKNLDVPV 680 ++ K PS F++ + V Sbjct: 625 ELFLSAAKWRRHYYEDMYMQPSRFLDEVPEELVKT 659 >UniRef50_D0LJZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJZ3_HALO1 Length = 787 Score = 341 bits (875), Expect = 5e-92, Method: Composition-based stats. Identities = 97/409 (23%), Positives = 168/409 (41%), Gaps = 56/409 (13%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 ++ LNPAQ +AV +G+ L+VLAGAG+GKT VLV R ++ RG P IL + F KA Sbjct: 4 TAQLNPAQRKAVEHGDGPLMVLAGAGTGKTRVLVNRIAHMVDRG-VPPRDILAVTFTNKA 62 Query: 254 AEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 A+EM ER+RE L + TFHA + +++ + + + + + + Sbjct: 63 AKEMRERLRELLGMAANAMWIGTFHATCVKLLRIHGEHIGLSRDFTIFDSDDQKRLLNAL 122 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 K+ +D+ + LA ++DR S Sbjct: 123 IKEHG--------------------------LEDQVSAKTLAVQIDRCKS---------- 146 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRF---- 427 + + L+ + ++ + + AVDF+ L+ + + + Sbjct: 147 ----RDEDPMDRHGGWGDDLLREIYPLYQAGMAQQGAVDFNDLLLKVLELARDPTVGPVL 202 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + + H+LVDEFQD + + L+ + L VGDD Q+IY + GA+ F Sbjct: 203 SARFDHVLVDEFQDTNRVQFRLVRHFADVSR--NLTVVGDDDQSIYSWRGAEPRNLLEFK 260 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAV---TLLDES 544 ++ + E L+ YR S I + AN I +N + +K L + ++G + + D Sbjct: 261 RDYPDAEVVKLEQNYRSTSVILDAANAVIAKNRNRHEKALWTASDGGESILWEPCPSDRE 320 Query: 545 QLDALLDKLSGYAKPEER----ILILARYHHMRPASLEKAATRWPKLQI 589 + + + G E R + IL R E+ +I Sbjct: 321 EATFIARAIRGLVSAENRDFSDMAILYRTRAQSRQLEEQLRRFDIHYEI 369 Score = 89.4 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 19/110 (17%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 + ++ MTIHA+KG + V + GL+EG FP+ + EE R Sbjct: 545 DRGKVKMMTIHAAKGLEFPVVFLCGLEEGL--FPSLRERD-------DQNDGDTLEEEYR 595 Query: 645 LMYVALTRARHRVWALF----------NKENPSPFVEILKNLDVPVARKP 684 L YVA+TRAR R+ + + PS F++ + + + V +P Sbjct: 596 LAYVAITRARERLVLTYAMQRMIWGETRSQRPSRFLDSIPDDCLAVRAEP 645 >UniRef50_A9H0P3 UvrD/REP helicase n=3 Tax=Alphaproteobacteria RepID=A9H0P3_9RHOB Length = 868 Score = 340 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 91/390 (23%), Positives = 152/390 (38%), Gaps = 51/390 (13%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNPAQ AV + +L+LAGAG+GKT L AR LL G A P ++L + F KAA Sbjct: 30 GLNPAQREAVEQLDGPVLMLAGAGTGKTRALTARIVHLLNTGRARPNEVLAVTFTNKAAR 89 Query: 256 EMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM R+ L TFHA+ + ++++ ++ V + S + Sbjct: 90 EMKNRVGAMLGQPVEGMPWLGTFHAICVKLLRRHAELVGLKSNFTILDTDDQLRLL---- 145 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 + V + D R+LAS +D W + Sbjct: 146 ---------------------KQLVSAESIDDKRWPARQLASIIDGWKN----------- 173 Query: 373 MIASAPEEIRDLFSKRIK-LMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----R 426 A PE++ + L ++ L NAVDF L+ + I + + Sbjct: 174 -SAFTPEKVPTADAGAYNHKGVKLYAQYQRRLIELNAVDFGDLLLHMVTIFQTHDDVLKQ 232 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + + +ILVDE+QD + + L L + VGDD Q+IY + GA++ F Sbjct: 233 YQRWFAYILVDEYQDTNVAQYLWLRLLAA--GHKNICCVGDDDQSIYGWRGAEVGNILRF 290 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD---E 543 ++F L+ YR I A+ I+ N G+L K L + + ++ + E Sbjct: 291 EKDFPGAHVVRLEQNYRSTPHILAAASGVIEGNEGRLGKTLWTAADEGERIRLIGHWDGE 350 Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMR 573 + + + + + + + Sbjct: 351 EEARWIGEDIEALCDGSSYLAKRRQNSRSQ 380 Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 20/114 (17%) Query: 579 KAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFP 638 + ++ MT+HA+KG + V + G ++G + ES ++ Sbjct: 652 DNESDDGGAKVSIMTLHAAKGLEFPMVFLPGWEDGLFPSQRSMDESGLKGL--------- 702 Query: 639 DAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVAR 682 EERRL YV +TRA F PS F++ L V V Sbjct: 703 -EEERRLAYVGITRAEEVCTISFVSNRRVFGQWQNAMPSRFIDELPQAHVEVLT 755 >UniRef50_B9X9R1 UvrD/REP helicase n=1 Tax=bacterium Ellin514 RepID=B9X9R1_9BACT Length = 689 Score = 339 bits (870), Expect = 2e-91, Method: Composition-based stats. Identities = 101/401 (25%), Positives = 166/401 (41%), Gaps = 64/401 (15%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 + S LNP Q A +L+LAGAG+GKT V+ R ++ RG +P IL + F Sbjct: 2 LNLSTLNPQQRMAAETIRGPVLILAGAGTGKTRVITFRIAHMIERG-VAPGSILAVTFTN 60 Query: 252 KAAEEMDERIRERLH----------TEDITARTFHALALHIIQQGSKKVPIVSKLENDTA 301 KAA EM ER+ + + E T TFH+L + I++Q +K+ Sbjct: 61 KAAREMQERVNKLIPRPSKKSRDEKPERPTLCTFHSLCVRILRQHIEKLGYKKNFVIYDQ 120 Query: 302 ARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVS 361 I + Q S K ++ + + L ++ + Sbjct: 121 TEQLGAIKKILSQVSAK-------------------------GEKTDPAAILAMLSKYKN 155 Query: 362 LMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVI 421 E I + E IR ++ AL+A NAVDF LI + + Sbjct: 156 GGSQAAAFADESIKAMAEHIRT--------------RYESALRACNAVDFDDLILLTLRL 201 Query: 422 LEKGRF-----ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFS 476 E+ + +++I+VDE+QD + + +L+ L K++ L VGDD Q+IY + Sbjct: 202 FEEHPDALEACRNRFRYIMVDEYQDTNASQFSLVHYLTKEHR--NLCVVGDDDQSIYGWR 259 Query: 477 GAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKK 536 GA++S ++F E + L+ YR + I AN I+ N + K L S K Sbjct: 260 GAEISNLLDMEKHFPEVKVVKLEQNYRSTNVILTAANAVIKNNLRRRGKQLWSDKGQGTK 319 Query: 537 A---VTLLDESQLDALLDKLS----GYAKPEERILILARYH 570 DE++ A+++++ P + IL R + Sbjct: 320 ITLHTFESDEAEAKAIVEQIEFKRLASRIPWSQQAILFRTN 360 Score = 84.4 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 67/196 (34%), Gaps = 36/196 (18%) Query: 493 GERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDK 552 E L+ R + E A N + K L + + D + + +L Sbjct: 492 TETGYLEELRRS-EKTAEAA-----DNRVRNLKDLTGILDEDNHTIVAGPDGTHQPVLT- 544 Query: 553 LSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQE 612 + A + L R E + +T+H+ KG + +V IVGL++ Sbjct: 545 -NDPADRLQTFLEELTLDSERKEEKEAQGE-----AVTLITMHSCKGLEFPHVYIVGLED 598 Query: 613 GSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN------- 665 G + E ++ EERRL YVA+TRA + + Sbjct: 599 GLLPHSRSKVEGTLD-------------EERRLFYVAITRAMQTLTISYCTGRKKYGQVM 645 Query: 666 ---PSPFVEILKNLDV 678 PS F++ L V Sbjct: 646 PCHPSGFLKELPEELV 661 >UniRef50_Q11GU4 ATP-dependent DNA helicase, Rep family n=53 Tax=Alphaproteobacteria RepID=Q11GU4_MESSB Length = 876 Score = 339 bits (870), Expect = 2e-91, Method: Composition-based stats. Identities = 101/459 (22%), Positives = 165/459 (35%), Gaps = 99/459 (21%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNP Q AV E +LVLAGAG+GKT VL R +LA G A P QIL + F KAA Sbjct: 44 GLNPEQRLAVETTEGPVLVLAGAGTGKTRVLTTRIAHILATGRAYPSQILAVTFTNKAAR 103 Query: 256 EMDERIRERLHTE---DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM RI + TFH++ + ++++ ++ + S + Sbjct: 104 EMKTRIGVLVGQAIEGMPWLGTFHSIGVKLLRRHAELAGLTSSFTILDTDDQVRLL---- 159 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 + + D R+LA +D W + G A+ Sbjct: 160 ---------------------KQLIQAEALDDKRWPARQLAMMIDGWKN----KGLGPAD 194 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RF 427 + + + L A++ LK NA DF L+ I I + + Sbjct: 195 IPEGDARAFGNGKGR------ALYAAYQQRLKTLNATDFGDLLLHPIRIFREHPDVLREY 248 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQ------------------------------- 456 + +K+ILVDE+QD + + L L ++ Sbjct: 249 HAKFKYILVDEYQDTNTAQYMWLRLLAQRPGSPGTGGLPAEGRARGHALGDVSQAHAAGG 308 Query: 457 -------------NSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYR 503 ++ + VGDD Q+IY + GA++ F ++F L+ YR Sbjct: 309 PGASPGQRPGGASANKVNICCVGDDDQSIYGWRGAEVDNILRFEKDFPGATVIRLERNYR 368 Query: 504 FNSRIGEVANRFIQQNPGQLKKPLNS-LTNGDKKAVTLL-------DESQLDALLDKLSG 555 + I A+ I N G+L K L + ++ D V + + L ++ L Sbjct: 369 STAHILGAASHLIAHNEGRLGKTLFTEHSDPDAPRVKVHAAWDSEEEARALGEEIEALQA 428 Query: 556 YAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTI 594 + IL R + + R+ L + + I Sbjct: 429 KGHALNDMAILVRASF----QMREFEDRFVTLGLSYRVI 463 Score = 91.7 bits (226), Expect = 8e-17, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 43/113 (38%), Gaps = 20/113 (17%) Query: 579 KAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFP 638 A + MT+H++KG + D V + G +EG FP L Sbjct: 620 DAERDEELDAVSLMTLHSAKGLEFDTVFLPGWEEGL--FPHQRS--------LDEGGRSG 669 Query: 639 DAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVA 681 EERRL YV +TRA+ + F PS F++ L V V Sbjct: 670 LEEERRLAYVGVTRAKKNLHIWFTSNRRIHGLWQSTIPSRFLDELPEKHVEVT 722 >UniRef50_UPI00016C5306 ATP-dependent DNA helicase n=2 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C5306 Length = 755 Score = 339 bits (869), Expect = 2e-91, Method: Composition-based stats. Identities = 83/414 (20%), Positives = 156/414 (37%), Gaps = 44/414 (10%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + L P Q AV++GE LL+LAGAGSGKT V+ R +LL G IL + F KAA Sbjct: 9 ADLTPDQRAAVMHGEGPLLILAGAGSGKTRVITRRVAYLLRAG-VRAHNILAITFTNKAA 67 Query: 255 EEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 EM R+ + + TFH+L +++Q ++++ + + + Sbjct: 68 GEMKNRVEKLAPGNRVWVSTFHSLGARLLRQYAERLGFDRNFTIYDTDDRNKLVKDALEA 127 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 + R+A + + + + Sbjct: 128 AGIDNV-------------------------KFTPERIAGAISKAKN-----------QL 151 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFI-----S 429 + P+ R K +A + ++ L++ NA+DF L++ + L++ + S Sbjct: 152 VTPPQYERTATDFFQKTVAAVYPRYEKRLRSANAMDFDDLLYLPAMALKQNEELRAELDS 211 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 +++I++DE+QD + + ++ L N + VGD Q+IY++ G+ + + F + Sbjct: 212 RFRYIMIDEYQDTNSAQYQIVKQLSINNP--NVCVVGDPDQSIYKWRGSDIKIILDFERD 269 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDAL 549 F L YR I A+ I N + KK L + + + ++ LD Sbjct: 270 FPNARTITLAQNYRSTKSIIRAASVLIDHNKQRKKKDLVTDNPQGEPVNVITFDNGLDEA 329 Query: 550 LDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQAD 603 + + + R H + + + KG Sbjct: 330 EGVVVRIKEAVKAGTFKYRDHAIFMRINALTRSLESAFVKHGVPFQIVKGLAFF 383 Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 37/96 (38%), Gaps = 22/96 (22%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 + MT+HASKG + V I+ +++G + EERRL + Sbjct: 549 HVSVMTLHASKGLEFPAVYILAVEQGLLPHERSLANDE------------EIEEERRLCF 596 Query: 648 VALTRARHRVWALFNKENP----------SPFVEIL 673 V +TRA ++ + S F++ L Sbjct: 597 VGMTRAMKELYLCHARMREFRGQLNYCIVSQFIQEL 632 >UniRef50_Q5PB91 DNA helicase II n=20 Tax=Rickettsiales RepID=Q5PB91_ANAMM Length = 671 Score = 338 bits (868), Expect = 3e-91, Method: Composition-based stats. Identities = 94/386 (24%), Positives = 162/386 (41%), Gaps = 49/386 (12%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN Q AV + +L+LAGAG+GKT + +R G+++ RG A P QIL + F KAA Sbjct: 36 SLNEEQKEAVFCVDGPVLILAGAGTGKTRTITSRMGYIIKRGLAFPSQILAVTFTNKAAR 95 Query: 256 EMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQC 315 EM R+ E + T I TFHA+A I++ +++V + I Sbjct: 96 EMLVRVSEIVDTTGIWLGTFHAIAARILRSNAERVGLRRDFTVIGPDDQLQLI------- 148 Query: 316 SEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIA 375 + + + Q P +++ + RW + G + Sbjct: 149 -----------KAIVNDTQPGHPAEEC-------KKMMHAIQRWKEKGLLPAGVTDTELQ 190 Query: 376 SAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RFISP 430 P +RD + ++ LKA N DF L+ + + + Sbjct: 191 KCPNIVRD-----------VYYEYQERLKALNCADFGDLLLYNVSMFSAHADVLSHYQEQ 239 Query: 431 WKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENF 490 +K+++VDE+QDI+ + L + ++ + + VGDD Q+IY + GA++ F ++F Sbjct: 240 FKYVMVDEYQDINTVQYLWLRLIVQK--RKNICCVGDDDQSIYSWRGAEVGNILRFADDF 297 Query: 491 GEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL------LDES 544 E + L+ YR S I A+ I N +L K L + + +K + ++ Sbjct: 298 PEAKIVRLECNYRSTSNILCAASAIINNNKSRLGKKLWTTNHAGQKVGLMKFWDGRMEAQ 357 Query: 545 QLDALLDKLSGYAKPEERILILARYH 570 + + S Y E IL+ A + Sbjct: 358 FISEYIKGSSEYRFDETAILVRAGFQ 383 Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 20/98 (20%) Query: 586 KLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRL 645 + MT+HA+KG + V + G +EG FP L EERRL Sbjct: 565 NNHVYLMTLHAAKGLEFPLVFLPGWEEGV--FPHEKSIHDSTGNAL--------EEERRL 614 Query: 646 MYVALTRARHRVWALF----------NKENPSPFVEIL 673 YV +TRAR +++ S F++ L Sbjct: 615 AYVGMTRAREQLFISCVAVREVNNWRQPMKISRFIKEL 652 >UniRef50_C7RHP9 UvrD/REP helicase n=3 Tax=Anaerococcus RepID=C7RHP9_ANAPD Length = 731 Score = 338 bits (868), Expect = 3e-91, Method: Composition-based stats. Identities = 87/411 (21%), Positives = 155/411 (37%), Gaps = 51/411 (12%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 + LN Q +AV++ E LLVLAGAGSGKT VL +L+ P I+ + F Sbjct: 1 MNLDGLNKMQRKAVLHDEGPLLVLAGAGSGKTRVLTTSIAYLIEEKNIDPRNIIAITFTN 60 Query: 252 KAAEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIA 309 KAA EM ERI + L + TFH++ I++ K+ + + I Sbjct: 61 KAANEMKERISKLLGMDVSHLWIGTFHSICARILRMNIDKIGYDRNFTIYDTSDQKTLIK 120 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 E + + D+ R + + A Sbjct: 121 EIINELG--------------------------YKDDIAPRDALNVIS----------SA 144 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR--- 426 + + + + + + + + K ++ NA+DF LI + + + + + Sbjct: 145 KNKSLDPDEFLKLNTYYSKGDIYYEIYKKYEEKKFYYNALDFDDLIDKVLYLFVRSKETL 204 Query: 427 --FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 + ++++ VDE+QD + + L+ + VGD Q+IY F GA +S Sbjct: 205 DFYQKKFEYVFVDEYQDTNNSQYELIKYFA--GFHNNVTVVGDADQSIYSFRGANISNIL 262 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVT---LL 541 F ++F + E L+ YR I E AN I+ N + K L + G + + + Sbjct: 263 NFEKDFKDAETIKLEQNYRSTKNILETANLLIENNSERKDKELWTENKGGDRVIYKANSV 322 Query: 542 DESQLDALLDKLS---GYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + + +LD + + IL R + E ++ Sbjct: 323 ESEEAKFVLDNIKSLMQEGYDAKDFAILYRTNAQSRPFEEILMKNLLDYKV 373 Score = 92.4 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 25/153 (16%) Query: 535 KKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASL--EKAATRWPKLQIDFM 592 + + ++ D +++D + + +S ++ +E Y ++ SL + T I M Sbjct: 492 ESSYSVEDRARIDNINEFISSASEYQENNPEDNIYDYLENLSLLSDLDKTESTDNSISLM 551 Query: 593 TIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTR 652 T+HA+KG + V +VGL EG FP +++ EERRL YVA+TR Sbjct: 552 TMHAAKGLEFPVVFVVGLDEGL--FPGKR-----------SIDEGNIEEERRLFYVAITR 598 Query: 653 ARHRVWALFNKEN----------PSPFVEILKN 675 A+ +++ + PS F++ + + Sbjct: 599 AQEKLFLSSAEARRNYGKPVFYKPSRFIDEIID 631 >UniRef50_C9LD15 ATP-dependent DNA helicase PcrA n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LD15_9BACT Length = 794 Score = 338 bits (868), Expect = 3e-91, Method: Composition-based stats. Identities = 85/397 (21%), Positives = 160/397 (40%), Gaps = 48/397 (12%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 ++ LN +Q +AV + L++AGAGSGKT VL + +LL G P +IL L F Sbjct: 1 MQEDFLNESQRQAVQYCDGPSLIIAGAGSGKTRVLTYKVAYLLQNG-YQPWEILALTFTN 59 Query: 252 KAAEEMDERIRERLHTEDI---TARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFI 308 KAA EM ERI + + + A TFH++ I++ + + S AA + + Sbjct: 60 KAAREMRERIAQLVEPAAVAMLWAGTFHSIFARILRIEHAALGLPSTFSIYDAADAKSLV 119 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 ++ D +A+R+ + + + Sbjct: 120 KSIIREL-------------------------KLDDKIYRPGTVAARISDAKNHLMLPDE 154 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK---- 424 A++ + + + + + + + NA+DF L+ + ++ Sbjct: 155 YAADV-----DRMNRDKRDGLTELVRIYNIYIERCRQANALDFDDLLLRTYLLFHDRPDI 209 Query: 425 -GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 +++ ++++LVDE+QD + + ++ L + L VGDD Q+IY F GA + Sbjct: 210 CEKYVRKFRYVLVDEYQDTNAVQYRIIRYLCP--GEARLCVVGDDAQSIYAFRGADIGNI 267 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL-- 541 F ++ + L+ YR I + AN I +N ++ K + S K + Sbjct: 268 LNFQTHYPSAKLIKLERNYRSTENIVQAANSIISRNKNRIPKTIYSENGAGDKVCIISAY 327 Query: 542 ---DESQ--LDALLDKLSGYAKPEERILILARYHHMR 573 DES + + + +++ IL R + Sbjct: 328 TDKDESAKVVKEIFKLRRQHHISLDQVAILYRTNAQS 364 Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 23/142 (16%) Query: 544 SQLDALLDKLSGY-AKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQA 602 + LL+ + G+ ++ E +++LA Y ++ + ++ MT+HA+KG + Sbjct: 512 ENIQELLNSIKGFESEQETGVVLLADYLPQVVLLTDQDQQDDDEPKVTLMTVHAAKGLEF 571 Query: 603 DYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFN 662 + V + GL++G FP A + E EERRL YVA+TRA+ + + Sbjct: 572 EAVFVTGLEDGL--FPGTAAKYSAREL----------EEERRLFYVAVTRAKAHCFITYA 619 Query: 663 KEN----------PSPFVEILK 674 K PS F++ + Sbjct: 620 KTRYIYGRLEFCEPSLFLQEID 641 >UniRef50_C4V2E0 ATP-dependent DNA helicase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V2E0_9FIRM Length = 746 Score = 338 bits (868), Expect = 3e-91, Method: Composition-based stats. Identities = 91/399 (22%), Positives = 160/399 (40%), Gaps = 54/399 (13%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 LN Q RAV + LL++AGAGSGKT VL R LL G P +IL + F KAA Sbjct: 5 QGLNEPQQRAVACLQGPLLIVAGAGSGKTRVLTFRIANLLEHG-VPPYRILAITFTNKAA 63 Query: 255 EEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVP-IVSKLENDTAARHELFIAEW 311 EM ER+ + +D+ TFH+ +++ + AA + I E Sbjct: 64 REMRERVDTLIGDAAQDVWLSTFHSFCARLLRMELEHYGRYAKNFVIYDAADSKGLIREC 123 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 K+ + + +Q ++ +R + Sbjct: 124 LKELNIDEKHTA---------------------PGAVQAHISDAKNRLLD---------- 152 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----R 426 +A+ + D F+ + +A + ++ L+ NA+DF L+ + +L K + Sbjct: 153 --VAAFTAQATDFFA---EQVAKIYALYQSKLQENNALDFDDLLMLTVELLTKNEELRMK 207 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + +++ILVDE+QD + + A+ L ++ + VGD Q+IY + GA M F Sbjct: 208 YQKKFQYILVDEYQDTNGAQYAITKLLAAEHR--NICVVGDADQSIYGWRGADMRNIMNF 265 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL---LDE 543 +++ E L+ YR I AN I+ N + KK L + + ++ Sbjct: 266 EQDYPEATVILLEQNYRSTKNILAAANAVIENNLTRKKKELWTDNPTGDRITIYEGATEK 325 Query: 544 SQLDALLDKLSGYAKP----EERILILARYHHMRPASLE 578 ++ ++ ++ I +L R + E Sbjct: 326 NEASYIVREVERLHTMFHVKYGDIAVLYRTNAQSRNIEE 364 Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 22/108 (20%) Query: 581 ATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDA 640 T + MT HA+KG + V + G++EG FP + ++D Sbjct: 547 QTEQSDGTVTLMTFHAAKGLEFPAVFMAGMEEGL--FPHSRT----------LLDDTEIE 594 Query: 641 EERRLMYVALTRARHRVWALFNKE----------NPSPFVEILKNLDV 678 EERR YV +TRA R++ + ++ PS F+ + V Sbjct: 595 EERRTCYVGITRAERRLYLTYARQRTIYGRTEMSRPSRFLAEIPEELV 642 >UniRef50_B3EU74 UvrD/REP helicase n=4 Tax=Bacteroidetes RepID=B3EU74_AMOA5 Length = 757 Score = 338 bits (867), Expect = 4e-91, Method: Composition-based stats. Identities = 90/400 (22%), Positives = 162/400 (40%), Gaps = 46/400 (11%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q +A VN E +++AGAG+GKT VL R +L+ + P +IL L F KAA E Sbjct: 8 LNEQQRQAAVNTEGPCMIIAGAGAGKTKVLTTRIAYLIQEKKVDPFKILALTFTNKAANE 67 Query: 257 MDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M +RI + + +++ TFH+ +++ + K+ S + + K+ Sbjct: 68 MKKRIEQVIGPAAKNVWLGTFHSCFAKLLRIEADKIGYPSSFSIYDTTDSKSLLKSIIKE 127 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 + + + + R++S +R ++ A+ Sbjct: 128 MNL---------------------DDKTYTPNTVLSRISSAKNRLIT---------AQEY 157 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RFIS 429 + P +D + + + A+DF ++ ++L + ++ Sbjct: 158 INNPIYQQDDEEAMKPKVGEIYVQYAKRCLQAGAMDFDDILLNTYLLLNQHLDILYKYQE 217 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 +++IL+DEFQD + + A++ L + VGDD Q+IY F GA + F ++ Sbjct: 218 RFQYILIDEFQDTNLAQYAIVKDLA--GIHKNICVVGDDAQSIYAFRGANIRNILNFEKD 275 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDK-----KAVTLLDES 544 + L+ YR I E AN I+ N QLKK + + + +A T +E Sbjct: 276 YPNLTIIKLEQNYRSTQNIVEAANGIIRNNQLQLKKNVWTANEKGEVIGLIRATTDAEEG 335 Query: 545 QLDA--LLDKLSGYAKPEERILILARYHHMRPASLEKAAT 582 +L A + + E IL R + A E Sbjct: 336 RLVAASIFEIKMQNQLRNEDFAILYRTNSQSRAIEEALRK 375 Score = 91.7 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 23/153 (15%) Query: 533 GDKKAVTLLDESQLDALLDKLSGYAKPEERI-LILARYHHMRPASLEKAATRWPKLQIDF 591 DK L + LL + + E++ LA + + + +I Sbjct: 500 EDKTVEGLARYENVQELLSGIKAFTANPEQVDTSLATFLQDVALATNNENEEDGEDKISL 559 Query: 592 MTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALT 651 MTIHA+KG + YV IVG++E FP++ E+ EERRL YVALT Sbjct: 560 MTIHAAKGLEFKYVYIVGIEEDL--FPSSMMLGSREDL----------EEERRLFYVALT 607 Query: 652 RARHRVWALF----------NKENPSPFVEILK 674 RA+ +V+ + + S F+ + Sbjct: 608 RAQKKVFLSYTISRYRFGKLKQCEVSRFIGEID 640 >UniRef50_B3QYS3 UvrD/REP helicase n=9 Tax=Chlorobiaceae RepID=B3QYS3_CHLT3 Length = 765 Score = 338 bits (867), Expect = 4e-91, Method: Composition-based stats. Identities = 90/395 (22%), Positives = 160/395 (40%), Gaps = 55/395 (13%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 LN Q +AV + ++++AGAGSGKT V+ R +++ + +P QIL L F KAA Sbjct: 20 KSLNTEQKKAVETTKGPVMIIAGAGSGKTRVITFRIAYIINKENCAPNQILALTFTNKAA 79 Query: 255 EEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 EM R+ E L T + TFH+ +++Q + ++ S A + I Sbjct: 80 NEMRSRVEEILGTGSTRGLWIGTFHSNFARLLRQHADRLGFTSDYTIYDADDSKNLI--- 136 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 KQ + A + + S+ + E++ + + + Sbjct: 137 -KQIITELGIATDVLAPNAVQGKISMAKNRLVTPEQMSQNASDFIS-------------- 181 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----R 426 + A + + L+ NA+DF L+ + I + + Sbjct: 182 ------------------EKTAEVFYKYNERLQKNNALDFDDLLIKPIKLFNEHPEILAH 223 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + +++I++DE+QD + + + L Q+ + VGDD Q+IY + GA ++ F Sbjct: 224 YQERFQYIMIDEYQDTNRAQYIVAKMLAGQHR--NICVVGDDAQSIYSWRGADIANILGF 281 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD---- 542 ++ E C L+ YR I +VAN I N QL+K L + +N + VTL + Sbjct: 282 QNDYKEATICRLEENYRCTKTILKVANTVISNNKEQLEKTLYT-SNETGEPVTLFEATDE 340 Query: 543 ----ESQLDALLDKLSGYAKPEERILILARYHHMR 573 E A+ ++ I R + Sbjct: 341 RREAEKVAMAIRERKLSSGNQNSDFAIFYRTNAQS 375 Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 44/123 (35%), Gaps = 24/123 (19%) Query: 566 LARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESI 625 L + + ++ Q+ MTIHA+KG + V + GL+E + Sbjct: 543 LNAFLQSASLATDQDNADANGNQVTLMTIHAAKGLEFPVVFVTGLEERLFPLNPDEPREL 602 Query: 626 MEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKN 675 EE L YVALTRA +++ F K S F+E L Sbjct: 603 EEERRL--------------FYVALTRAEKKLYVSFAKSRYKFGQSFPAKRSRFIEELDG 648 Query: 676 LDV 678 V Sbjct: 649 GSV 651 >UniRef50_Q1J014 UvrD/REP helicase n=4 Tax=Deinococci RepID=Q1J014_DEIGD Length = 741 Score = 338 bits (866), Expect = 5e-91, Method: Composition-based stats. Identities = 93/408 (22%), Positives = 156/408 (38%), Gaps = 46/408 (11%) Query: 187 DFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILL 246 D + LNP QA+A + LV+AGAGSGKT LV R L+ P +IL Sbjct: 3 DLPASSLLAQLNPNQAQAANHYTGPALVIAGAGSGKTRTLVYRIAHLIGHYGVDPGEILA 62 Query: 247 LAFGRKAAEEMDERIRERL-HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHE 305 + F KAA EM ER R + + + TFH+ + I++ + + + Sbjct: 63 VTFTNKAAAEMRERARHLVEGADRLWMSTFHSAGVRILRAYGEHIGLKRGFVIYDDDDQL 122 Query: 306 LFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRM 365 + E E R L LDR S + Sbjct: 123 DILKEIMGSIPG-------------------------IGAETHPRVLRGILDRAKSNLLT 157 Query: 366 HGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK- 424 +A PE + ++ A + ++ K +NA+DF LI + + + ++ Sbjct: 158 PAD-----LARHPEPFISGLPR--EVAAEAYRRYEARKKGQNAIDFGDLITETVRLFQEV 210 Query: 425 ----GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQM 480 R + I VDE+QD + + L L ++ L VGD Q+IYRF GA + Sbjct: 211 PAVLERVQDRARFIHVDEYQDTNKAQYELTRLLASRDR--NLLVVGDPDQSIYRFRGADI 268 Query: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL 540 F +++ + + L+ YR ++R+ +AN+ I+ N +L+K L + + Sbjct: 269 QNILDFQKDYLDAKVYMLEQNYRSSARVLTIANKLIENNAERLEKTLRPVKEDGHPVLFH 328 Query: 541 ------LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAAT 582 + + L +L + +L R + E Sbjct: 329 RATDQRAEGDFVAEWLTRLHAEGMRFSDMAVLYRTNAQSRVIEESLRR 376 Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 34/124 (27%), Positives = 52/124 (41%), Gaps = 25/124 (20%) Query: 561 ERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAA 620 + +L+ MR ++ P+ + MT+H +KG + V IVG +EG Sbjct: 537 DDAALLSSVDDMRT---KQENKDVPEDAVTLMTLHNAKGLEFPVVFIVGTEEGLL----- 588 Query: 621 ARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENP----------SPFV 670 + ALL P EERRL YV +TRA R++ + S F+ Sbjct: 589 ----PSKNALLEPGG---IEEERRLFYVGITRAMERLFLTAAQNRMQYGKTLATEDSRFL 641 Query: 671 EILK 674 E +K Sbjct: 642 EEIK 645 >UniRef50_A6DKH4 UvrD/REP helicase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DKH4_9BACT Length = 674 Score = 338 bits (866), Expect = 6e-91, Method: Composition-based stats. Identities = 102/408 (25%), Positives = 176/408 (43%), Gaps = 52/408 (12%) Query: 191 QVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFG 250 V LN Q +AV E LL+LAGAG+GKT V+ +R +++ G A P +IL + F Sbjct: 2 SVLLDRLNDEQRQAVTTTEKPLLILAGAGTGKTMVVTSRIAFIVQSGRAEPGEILAVTFT 61 Query: 251 RKAAEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 KAA EM ER + +D+ TFH+ + I+++ + + Sbjct: 62 NKAANEMKERAGRLIGQKAVKDLWVSTFHSFGMKILRKYAYQAGYAPDFTLAEYGDQVGL 121 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 I + + V +G D + + ++ Sbjct: 122 IKQGLNELG-------------------LVEDGMSQDPKAILSLISM------------- 149 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR- 426 A+ PE++ + + + + + ++ L A N +DF L+ + +L+K Sbjct: 150 ---AKAKNQVPEDLEESSDPWEQRIGGIYRYYQEYLHALNILDFDDLLMLTVRLLQKDEK 206 Query: 427 ----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 +K+++VDEFQD + + LL AL ++ + + VGDD Q+IY + GA+++ Sbjct: 207 VRQLLQDKFKYVMVDEFQDTNHIQMELLHALLPKH-EPNICVVGDDDQSIYSWRGAEVAN 265 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL- 541 AF + F G+ L+ YR N+ I AN+ I N + K L S G +K + Sbjct: 266 ILAFPQIFPGGKLIKLEQNYRSNNVILNAANKVISINSQRHVKNLWSAQEGGEKLKVVAC 325 Query: 542 ------DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATR 583 ++ D +L+K++G IL R +H + +LE A R Sbjct: 326 GSEEREAKAIADTILNKVNGRQNTYGDCAILYRSNH-QSRALEDAMRR 372 Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 56/144 (38%), Gaps = 26/144 (18%) Query: 548 ALLDKLSGYAKPEERILILARYHHMRPASLE---KAATRWPKLQIDFMTIHASKGQQADY 604 ++ + G K ++R + L Y E + + +T+HASKG + Sbjct: 516 EIIHTIEGREKEDKRCIPLQEYLESVSLMEEYRRRQEKDEDPNAVMLLTVHASKGLEFPS 575 Query: 605 VIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKE 664 V + G+++ FP + AEERRL YVALTRA+ + ++K Sbjct: 576 VFVTGMEKNL--FPHEKSAGLK-----------ALAEERRLFYVALTRAKSDLILTWSKM 622 Query: 665 N----------PSPFVEILKNLDV 678 PS F+ L V Sbjct: 623 RKAGRRMSQRMPSQFLGELPKDLV 646 >UniRef50_Q2S550 ATP-dependent DNA helicase pcrA n=2 Tax=Rhodothermaceae RepID=Q2S550_SALRD Length = 786 Score = 337 bits (865), Expect = 7e-91, Method: Composition-based stats. Identities = 92/409 (22%), Positives = 166/409 (40%), Gaps = 54/409 (13%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN Q AV E ++++AG GSGKT L R +LLA G+A P IL L F KAA Sbjct: 28 GLNDKQREAVTTTEGPVMIIAGPGSGKTRALTHRIAYLLAAGKAQPRDILALTFTNKAAN 87 Query: 256 EMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM ER+ + + TFH+ +++ K+ A + I Sbjct: 88 EMQERVEALVGDDARGMWVGTFHSSFARLLRMEGDKIGYSEDFSIYDTADSKRLIR---- 143 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 ++M+ + + +QR ++S + + A+ + Sbjct: 144 -----------------QQMKGRNLDTDVVKPRSVQRMISSAKNEMIDPQEYAELARGD- 185 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RFI 428 + +++A + A++ ALK NA+DF L+ + I + E+ ++ Sbjct: 186 --------------QQEIVAEVYPAYERALKQANALDFDDLLLKPIELFEQHEDVLEKYQ 231 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 + W+++ +DE+QD + + L L ++ L VGDD Q+IY F GA ++ F Sbjct: 232 TRWQYVHIDEYQDTNQAQYVLARKLSARHK--NLCVVGDDAQSIYAFRGADITNILNFDN 289 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDA 548 ++ + L+ YR I +A+ I++N Q++K L + N + + V L++ Sbjct: 290 DYPDATTIRLERNYRSTENIIRLADSIIEENDDQIEKSLWT-DNAEGEYVALMEALSEKD 348 Query: 549 LLDKLSGY--------AKPEERILILARYHHMRPASLEKAATRWPKLQI 589 K+ +L R + A E ++ Sbjct: 349 EAQKIERRVRDLHLRDGMEYGDFAVLYRTNAQSRAIEEALRKENVPYRV 397 Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 55/145 (37%), Gaps = 23/145 (15%) Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQAD 603 + L+ L+ Y + E I + + ++ ++ MT+HA+KG + Sbjct: 530 ENVQELISALAEYVESTEDATI-STFLQEVALMTDQDEAEEGDDKVTLMTLHAAKGTEFP 588 Query: 604 YVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNK 663 V + GL+EG E EERRL YV +TRA R++ + + Sbjct: 589 VVFVAGLEEGLFP------------LEQATQEKAELEEERRLFYVGVTRAEERLYLSWAR 636 Query: 664 EN----------PSPFVEILKNLDV 678 S F+E + + V Sbjct: 637 SRYRYGEQTSNTRSRFLEEVDSDVV 661 >UniRef50_C7NAU4 UvrD/REP helicase n=5 Tax=Fusobacteriaceae RepID=C7NAU4_LEPBD Length = 735 Score = 337 bits (865), Expect = 8e-91, Method: Composition-based stats. Identities = 92/398 (23%), Positives = 166/398 (41%), Gaps = 47/398 (11%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q +A E +L+LAGAGSGKT + R ++ SP IL L F KAA E Sbjct: 8 LNEEQRKAAEKIEGPVLILAGAGSGKTRTVTYRIAHMVKEIGISPLNILALTFTNKAARE 67 Query: 257 MDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M ER + ++ TFH+ ++ +++ S+++ + I + +K+ Sbjct: 68 MKERAAALIGHEANNLVVSTFHSFSVRLLKTYSERIGYGRNFNIYDVDDQKSIITKIKKE 127 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 + + + KL R++ ++ + + + Sbjct: 128 --------------------MGIKDNDNVQPGKLANRISKLKEQGIGIKEL--------- 158 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK----GRFISP 430 E D+ +L + + + LKA NA+DFS L+ A +L+ R Sbjct: 159 ----EREIDMRIPANRLFGEIYQKYDEVLKANNAMDFSDLLLNARKLLDDTFVLERIQER 214 Query: 431 WKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENF 490 +K+I+VDE+QD + + ++ + + + VGD+ Q+IY F GA ++ F ++ Sbjct: 215 YKYIVVDEYQDTNDIQYEMINMIAAKYR--NICVVGDEDQSIYAFRGANINNILNFERDY 272 Query: 491 GEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKK-----AVTLLDES- 544 E L+ YR +I + AN I+ N K L + + +K A+T+ DE+ Sbjct: 273 KEAFTVKLERNYRSTKKILDTANELIKNNKSSKGKTLWTDGSDGEKIKIYNAMTVYDEAD 332 Query: 545 QLDALLDKLSGYAKPEERILILARYHHMRPASLEKAAT 582 + + K + + IL R + EK + Sbjct: 333 FIVTEMKKKKRDGADYKDMTILYRTNAQSRVLEEKLLS 370 Score = 82.4 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 59/145 (40%), Gaps = 24/145 (16%) Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQAD 603 ++ LL+ + K + L Y M S + + MTIH+SKG + D Sbjct: 503 KNIEELLNSIIELEKQNPNMS-LNEYLDMISLSSSTDEMEDDENYVKLMTIHSSKGLEFD 561 Query: 604 YVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNK 663 YV + G+++G FP+ + +S EE YVA+TRA+ ++ ++ Sbjct: 562 YVFLAGMEDGL--FPSISFDSPEEELEEERRL----------CYVAITRAKKELFISYSS 609 Query: 664 E-----------NPSPFVEILKNLD 677 PS F+ +K + Sbjct: 610 SRKIWGKDDNLRRPSRFIYEMKQDN 634 >UniRef50_C8WBZ1 UvrD/REP helicase n=7 Tax=Alphaproteobacteria RepID=C8WBZ1_ZYMMN Length = 768 Score = 337 bits (864), Expect = 8e-91, Method: Composition-based stats. Identities = 103/393 (26%), Positives = 171/393 (43%), Gaps = 51/393 (12%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + LNP Q V E +LLVLAGAG+GKT+ L AR +L+ +A P QIL + F KAA Sbjct: 21 ARLNPEQKEVVRTTEGALLVLAGAGTGKTAALTARLAYLVETLKAWPSQILAVTFTNKAA 80 Query: 255 EEMDERIRERLHTED---ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 EM R+ + L ++ TFH++A ++++ ++ V + S + + Sbjct: 81 REMQMRVGDLLGSQAENMPWLGTFHSIAAKMLRRHAELVGLKSDFIILDTDDQIRLLKQL 140 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 + +E QW ++LA +DRW + G Sbjct: 141 -------------IQGQGIDEKQWP------------AKQLAGIIDRWKN----RGLTPD 171 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR----- 426 ++ + D A L A++ L + NA DF L+ +VIL + R Sbjct: 172 KIAGKEEDSFADGQG------AALYLAYQKRLLSLNACDFGDLLLHMLVILTQHREVLDS 225 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + +++I+VDE+QD + + L L ++N + VGDD Q+IY + GA+++ F Sbjct: 226 YHDRFRYIMVDEYQDTNQAQYLWLRLLAQKNR--NICCVGDDDQSIYSWRGAEVANILRF 283 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL------ 540 E+F + L+ YR +I A+ I N +L K L + + +K + Sbjct: 284 EEDFPGAKIIRLEHNYRSTPQILGAASGLITHNNARLGKTLWTERDQGEKVKIIGVWDGA 343 Query: 541 LDESQLDALLDKLSGYAKPEERILILARYHHMR 573 + QL A + L P ++ IL R Sbjct: 344 EEARQLVADVQNLRRANIPLNKMAILIRAQFQS 376 Score = 92.4 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 20/99 (20%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 +I MT+HA+KG + D+V + G +EG + E + EERRL Y Sbjct: 559 KITLMTMHAAKGLEFDHVFLPGWEEGVFPSQRSLDEGGLNSL----------EEERRLAY 608 Query: 648 VALTRARHRVWALFNKEN----------PSPFVEILKNL 676 V +TRA+ PS F+ L + Sbjct: 609 VGITRAKKCCTIFHAANRRVYGQWIASTPSRFISELPDD 647 >UniRef50_B4CU41 UvrD/REP helicase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU41_9BACT Length = 678 Score = 337 bits (864), Expect = 9e-91, Method: Composition-based stats. Identities = 103/397 (25%), Positives = 170/397 (42%), Gaps = 61/397 (15%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNP Q +AV E LL+LAGAG+GKT V+ R +L+++G P IL + F KAA+ Sbjct: 8 DLNPEQEQAVRTTEGPLLILAGAGTGKTRVITMRVAFLISQG-VDPSHILAVTFTNKAAD 66 Query: 256 EMDERIRERLHT---EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM ER+ + + + +T TFHAL + I++Q +K+ I + Sbjct: 67 EMRERLAKMIEPSQAKKVTMSTFHALCVRILRQDIEKLGWKKNFSIYDEGDQMGLIKKII 126 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 + + K DEKL +A L +S + +G + Sbjct: 127 TRTAAK--------------------------DEKLDPNVAKNL---ISKAKNNGWREVS 157 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RF 427 L + ++ LK NAVDF L+ A+ +L + R+ Sbjct: 158 ------------PGDEKTLAGAVFARYQAELKTLNAVDFDDLLLLAVKVLSEHADVRDRW 205 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQ----NSQTTLFAVGDDWQAIYRFSGAQMSLT 483 +++++VDEFQD + + L++ L K + + VGDD Q+IY + GA++S Sbjct: 206 HRRFRYLMVDEFQDTNRLQLELVSMLAKPAEGTGGRPNVAVVGDDDQSIYGWRGAEVSNI 265 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL--- 540 F +F + L+ YR + I AN I+ NP + K L S K + Sbjct: 266 LEFEAHFPDPVVVKLEQNYRSTNAILNTANFLIKNNPRRRPKKLWSSAGDGDKVRIVGMS 325 Query: 541 LDESQLDALLDKLSGYAKPE----ERILILARYHHMR 573 D + + + ++++ + E E IL R + Sbjct: 326 DDRQEAEFIANEIAQRSVTESAPHEEFAILFRMNAQS 362 Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 63/163 (38%), Gaps = 29/163 (17%) Query: 521 GQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKA 580 +LK+ + + L+D L + D ++ L R + A Sbjct: 496 DELKRTCKTPQEALSRETNLMD--LLKSFEDYQGRSSEGLRGFLDEMSLRQEREEDDDDA 553 Query: 581 ATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDA 640 + +T+HA+KG + +V ++GL+EG + E ++ Sbjct: 554 ----RGTGVTLITLHAAKGLEYPHVYLIGLEEGLLPHDRSKLEGTVD------------- 596 Query: 641 EERRLMYVALTRARHRVWALFNKEN----------PSPFVEIL 673 EERRL+YV +TRAR + + + PS F++ L Sbjct: 597 EERRLLYVGITRARRTLALSWCRHRIRYGSPMPCTPSSFIKEL 639 >UniRef50_C3QGR5 ATP-dependent DNA helicase n=23 Tax=Bacteroidales RepID=C3QGR5_9BACE Length = 792 Score = 337 bits (864), Expect = 9e-91, Method: Composition-based stats. Identities = 89/409 (21%), Positives = 161/409 (39%), Gaps = 48/409 (11%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLAR-GEASPEQILLLAFGRKAAE 255 LN +Q AV + LV+AGAGSGKT VL + +LL + +P IL L F KAA Sbjct: 9 LNESQCAAVTYNDGPSLVIAGAGSGKTRVLTYKIAYLLEQENGYNPWNILALTFTNKAAR 68 Query: 256 EMDERIRERLHTED---ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM ERI ++ E + TFH++ I++ ++ + S+ A + + Sbjct: 69 EMKERIARQVGMERARYLWMGTFHSIFSRILRAEAQYIGFTSQFTIYDTADSKSLLRSII 128 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 K+ + + +Q R+++ + V+ Sbjct: 129 KEMGLDE---------------------KTYKPGVVQARISNAKNHLVTPT--------- 158 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RF 427 A+ E + ++ + + + + A+DF L+ ++ R+ Sbjct: 159 GYAANKEAYEGDMAAKMPAIRDIYTRYWDRCRQAGAMDFDDLLVYTYILFRDFPDVLTRY 218 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + ++LVDE+QD + + +++ L K+N + + VGDD Q+IY F GA + F Sbjct: 219 QDQFHYVLVDEYQDTNYAQHSIILQLTKENQR--ICVVGDDAQSIYSFRGADIDNILYFT 276 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLD 547 + + + L+ YR I AN I++N Q++K + S + S ++ Sbjct: 277 KIYPNTKVFKLEQNYRSTQTIVCAANSLIEKNERQIRKAVFSEKEKGEPIGVFQAYSDVE 336 Query: 548 A-------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + + Y IL R + E R +I Sbjct: 337 EGDIVANKIAELRREYHYGYAEFAILYRTNAQSRIFEEALRKRSMPYKI 385 Score = 95.9 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 33/117 (28%), Positives = 49/117 (41%), Gaps = 25/117 (21%) Query: 578 EKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDF 637 + + ++ MT+H++KG + V +VGL+E FP+ Sbjct: 556 QDSDKADDGEKVTLMTVHSAKGLEFKNVFVVGLEENL--FPSGMVGDSPRAL-------- 605 Query: 638 PDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVARKP 684 EERRL YVA+TRA + F K PS F L+++DV R P Sbjct: 606 --EEERRLFYVAITRAEEHCYLSFAKTRFRYGKMEFGSPSRF---LRDIDVDYLRLP 657 >UniRef50_B0RZV9 ATP-dependent DNA helicase n=2 Tax=Finegoldia magna RepID=B0RZV9_FINM2 Length = 725 Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats. Identities = 91/404 (22%), Positives = 157/404 (38%), Gaps = 50/404 (12%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 + LN Q AV N + +L+LAGAGSGKT VL + + L +G S +IL + F Sbjct: 2 MNLDNLNDRQREAVENTDGPMLILAGAGSGKTKVLTTKIAYCLEKGLCSKYEILAITFTN 61 Query: 252 KAAEEMDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIA 309 KAA+EM ER+ L + + + TFHA+ I++ +++ A + Sbjct: 62 KAAKEMKERVENILQENVDSMWIGTFHAICSRILRVEIERIGFERNFTVYDRADQISLVK 121 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 E K + + + + R + Sbjct: 122 ECLKDMGVDPKNVE-------------------------IKNEINTISRLKNAGATEKNI 156 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG---- 425 E D L + ++ LK N++DF LI + ++ E+ Sbjct: 157 DKE----------DFDISLSTFTMELFQKYEHKLKRYNSLDFDDLIVKTNLLFEENPDLR 206 Query: 426 -RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 ++ +K++ VDE+QD + + L+ L +N + VGD Q+IY + GA + Sbjct: 207 EKYSDRFKYVFVDEYQDTNDTQYKLIKNLVSKND--NICCVGDSDQSIYGWRGANIQNIQ 264 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL---- 540 F ++F + L+ YR I ++AN I+ N + K L + N + Sbjct: 265 NFEKDFKNAKVILLEQNYRSTQPILDLANTVIKNNSLRKDKNLWTAKNEGDMPIYRRMYS 324 Query: 541 -LDESQLDALLDKLSGYAK-PEERILILARYHHMRPASLEKAAT 582 +DE+ + Y + P E + IL R + E+ Sbjct: 325 DIDEADQVVQWIEQERYRENPYEEMAILYRTNAQSRLFEERLNR 368 Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 51/121 (42%), Gaps = 26/121 (21%) Query: 566 LARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESI 625 L Y + T + MTIHA+KG + D V GL+EG+ P+ E + Sbjct: 524 LREYLETSSLMTDLDKTDDNTKGVSMMTIHAAKGLEFDVVFFTGLEEGTI--PSRVDEDV 581 Query: 626 MEEALLPPVEDFPDAEERRLMYVALTRARHRVWAL----------FNKENPSPFVEILKN 675 EERRL YVA+TRAR +++ F + S F+E ++N Sbjct: 582 --------------EEERRLCYVAITRARKKLYITSVQSRRRFNEFQTKAESRFIEEMEN 627 Query: 676 L 676 Sbjct: 628 K 628 >UniRef50_Q72IS0 DNA helicase uvrD n=3 Tax=Thermus thermophilus RepID=Q72IS0_THET2 Length = 692 Score = 337 bits (863), Expect = 1e-90, Method: Composition-based stats. Identities = 102/398 (25%), Positives = 164/398 (41%), Gaps = 46/398 (11%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 +PLN AQ +AV++ E LV+AGAGSGKT +V R +L+AR P +IL + F KAA Sbjct: 7 APLNEAQRQAVLHFEGPALVVAGAGSGKTRTVVHRVAYLVARRGVFPSEILAVTFTNKAA 66 Query: 255 EEMDERIRERL-HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EEM ER+R + ++ TFHA AL I++ ++V + + E K Sbjct: 67 EEMRERLRGLVPGAGEVWVSTFHAAALRILRVYGERVGLRPGFVVYDEDDQTALLKEVLK 126 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 + + + + + G + Sbjct: 127 ELALSARPGP--------------------------------IKALLDRAKNRGVGLKAL 154 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FI 428 + PE L R+ +L ++ ALKA+ A+DF ++ A+ +LE+ Sbjct: 155 LGELPEYYAGLSRGRL---GDVLVRYQEALKAQGALDFGDILLYALRLLEEDEEVLRLVR 211 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 + I VDE+QD SP + L + + L AVGD Q IY F A + F Sbjct: 212 KRARFIHVDEYQDTSPVQYRFTRLLAGE--EANLMAVGDPDQGIYSFRAADIKNILDFTR 269 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDA 548 ++ E L+ YR I AN I +N +L+K L + G + E + Sbjct: 270 DYPEARVYRLEENYRSTEAILRFANAVIVKNALRLEKALRPVKRGGEPVRLYRAEDAREE 329 Query: 549 ---LLDKLSGYAKPEERILILARYHHMRPASLEKAATR 583 + ++++ P +R +L R + + A R Sbjct: 330 ARFVAEEIARLGPPWDRYAVLYRTNAQSRLLEQALAGR 367 Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 22/103 (21%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 ++ MT+H +KG + V +VG++EG P S +E EERRL Y Sbjct: 536 RVALMTLHNAKGLEFPVVFLVGVEEGL--LPHRNSVSTLEGL----------EEERRLFY 583 Query: 648 VALTRARHRVWALFNKE----------NPSPFVEILKNLDVPV 680 V +TRA+ R++ +E PS F+E ++ V Sbjct: 584 VGITRAQERLYLSHAEEREVYGRREPARPSRFLEEVEEGLYEV 626 >UniRef50_C9LR66 ATP-dependent DNA helicase PcrA n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR66_9FIRM Length = 746 Score = 337 bits (863), Expect = 1e-90, Method: Composition-based stats. Identities = 88/401 (21%), Positives = 159/401 (39%), Gaps = 52/401 (12%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q +AV E +L++AGAGSGKT L R ++L +G P+ IL + F KAA+E Sbjct: 17 LNERQRQAVEQIEGPVLIMAGAGSGKTKALTCRIAYMLEQG-IRPQNILAITFTNKAAQE 75 Query: 257 MDERIRERLHTE--DITARTFHALALHIIQQGSK-KVPIVSKLENDTAARHELFIAEWRK 313 M ER+ + E + TFH+ +++ P K + + I K Sbjct: 76 MRERVHHLVGAEADKLWMYTFHSFGARFLRREINNHPPFTDKFTIYDSDDSKQMIKNILK 135 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 + N D + R + +R+ + ++ +AE Sbjct: 136 EL-------------------------NLDDKQYPPRNIQARISAAKNALQGPESFRAEA 170 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE----KGRFIS 429 + E +A + + +K NA+DF L+ +L + R+ Sbjct: 171 SGNFYNE----------KIADVYDLYDKYMKQNNALDFDDLLFATTKLLADETIRRRWQD 220 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 + +IL+DE+QD + + + + ++ + AVGD Q+IY + GA + F E+ Sbjct: 221 HFHYILIDEYQDTNHAQYLMAKYIAGKSQ--NICAVGDADQSIYSWRGADLRNIMDFRED 278 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL-------D 542 + + L+ YR I AN I+ N +L+K L + N Sbjct: 279 YPSAQIIKLEQNYRSTQTILNAANAVIKNNVERLEKRLWTENNPGVHLQKYAASDEHNEA 338 Query: 543 ESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATR 583 + +++++ + P ++ +L R + E R Sbjct: 339 DFIVESMMKEHGENHVPYGKMAVLYRMNAQSRVIEESMVKR 379 Score = 84.4 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 22/99 (22%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 ++ MTIH++KG + V + G+ EG + +++ EERR Sbjct: 555 QDDKVTLMTIHSAKGLEFPIVYMAGMDEGIFP------------GVRSLMDETALEEERR 602 Query: 645 LMYVALTRARHRVWA-------LFNKENP---SPFVEIL 673 L YVA+TRA+ +++ ++ + P S F++ + Sbjct: 603 LCYVAITRAKEKLYLTTSAVRTMYGQVKPYVESRFLKEI 641 >UniRef50_B1GYW6 ATP-dependent UvrD family DNA helicase PcrA n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYW6_UNCTG Length = 772 Score = 337 bits (863), Expect = 1e-90, Method: Composition-based stats. Identities = 85/408 (20%), Positives = 171/408 (41%), Gaps = 53/408 (12%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 +++ + LNP+QA AV+ E L++ AGAG+GKT V+ R +LL+ G S + +L + F Sbjct: 2 KEMLTKNLNPSQAEAVLCTEGPLIIFAGAGTGKTRVITHRIAYLLSLGVVS-QSVLAVTF 60 Query: 250 GRKAAEEMDERIRERLHTEDI--TARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 KAA EM +RI + + + TFH+ H ++ + ++ + + Sbjct: 61 TNKAASEMKKRISDLIPGVGVNVWVSTFHSFCAHFLRAEASRISLNPYFLIYDFIDQKSV 120 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 + + K+ + + + K +A ++ R ++ Sbjct: 121 VKDCVKELNIDEKKFK-------------------------LSIIADKISRAKDNLKFPS 155 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR- 426 AE E D F +A + + ++ L+ +A+DF LI + + L++ Sbjct: 156 DMAAEA-----ESAGDFFG---ITVAKIYELYQKKLERADAMDFGDLIMRTVSALQRHSE 207 Query: 427 ----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + +K+I+VDE+QD + + + L + + VGDD Q++Y + GA ++ Sbjct: 208 LLEYYREKYKYIMVDEYQDTNHAQYIFIKLLAGKYH--NVCVVGDDDQSVYSWRGADINN 265 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD 542 F +++ + L+ YR +I AN+ ++ N ++ K L + N D +VT+L Sbjct: 266 ILDFEKDYPNAKSVKLEQNYRSTPKILSTANQVVKYNNARISKRLWTQ-NPDNGSVTVLK 324 Query: 543 ESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQID 590 + K++ ++ + A + Sbjct: 325 AVNENDEAVKIAE---------LIYSNAYDNKCKFSDYAVFYRTNAQS 363 Score = 94.4 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 25/151 (16%) Query: 532 NGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDF 591 N + + + + +L + +D ++ LA Y + + K ++ Sbjct: 500 NTPESKIKIENIQELISAVDDFEKNRSLDKS---LAGYLTQIALMNDADSPDESKGKVTL 556 Query: 592 MTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALT 651 MT+H +KG + D V I GL+EG FP D EERRLMYV +T Sbjct: 557 MTLHLAKGLEFDNVFICGLEEGL--FPMGE----------SAFNDKELEEERRLMYVGMT 604 Query: 652 RARHRVWALFNKEN----------PSPFVEI 672 RAR ++ ++ E PS F+ Sbjct: 605 RARKCLYLCWSTERKVYGKIIWNMPSRFIAE 635 >UniRef50_C0R0K3 ATP-dependent DNA helicase n=2 Tax=Brachyspira RepID=C0R0K3_BRAHW Length = 665 Score = 337 bits (863), Expect = 1e-90, Method: Composition-based stats. Identities = 93/401 (23%), Positives = 160/401 (39%), Gaps = 55/401 (13%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q +AV + + LL LAGAGSGKT V+ R +L+ G P QIL + F KAA E Sbjct: 5 LNEEQRQAVEHIDGPLLALAGAGSGKTRVITERIAYLIKHG-VLPSQILAVTFTNKAAAE 63 Query: 257 MDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M ERI + L + + TFH+ + +++ +K+ + +++ I ++ Sbjct: 64 MRERITKLLKEKPKQLVVSTFHSFCVRVLKGDIEKLGYKNNFSIYSSSDSRTLIRNILRE 123 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 + DE L R +LM+ + + + Sbjct: 124 ----------------------IKINTLNYDENLFAWYIDRFKN--NLMKPYEVEPHDDL 159 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRFIS 429 K+ + + ++ LK NAVDF+ LI+ I + + ++ Sbjct: 160 E--------------KIAKRVYEVYQSYLKGYNAVDFNDLINLTIDLYVEFPEVLNKYQE 205 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 +++I+VDE+QD + + L L + + VGDD Q+IY F GA +S +F Sbjct: 206 RFRYIMVDEYQDTNFAQYKLTTLLASKYR--NIAVVGDDDQSIYAFRGADVSNILSFENE 263 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDA- 548 + + + L YR I E A+ I N + K + + + E + + Sbjct: 264 YPDAKIVTLTKNYRSTKAILEAAHSVISNNTQRKDKKVVAEGEEGIPPTIMPCEDEREEA 323 Query: 549 --LLDKLSGYAK----PEERILILARYHHMRPASLEKAATR 583 + D + Y+ E +L R + E R Sbjct: 324 QFVADSIINYSISKRLNYEDFAVLFRMNAQSRLFEEAFRLR 364 Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 24/141 (17%) Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMRPASLE-KAATRWPKLQIDFMTIHASKGQQA 602 +++L++ + Y K + + + S+E + K I M+IHA+KG + Sbjct: 510 ENVESLMNGILEYEKSNKNATLKNYLDRILLMSIEEQNDDEDKKKGIMLMSIHAAKGLEF 569 Query: 603 DYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFN 662 YV I G+++G + E+ +E EERRL YVA+TRA+ + + Sbjct: 570 PYVYICGMEDGIMPHQKSLDENGLE-------------EERRLCYVAMTRAKKHLTLTYC 616 Query: 663 KEN----------PSPFVEIL 673 + PS F+E + Sbjct: 617 RSRTKMGKKVECTPSVFLEEM 637 >UniRef50_B9KXW3 ATP-dependent DNA helicase pcrA n=2 Tax=Thermomicrobia (class) RepID=B9KXW3_THERP Length = 771 Score = 336 bits (862), Expect = 1e-90, Method: Composition-based stats. Identities = 90/404 (22%), Positives = 155/404 (38%), Gaps = 55/404 (13%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 L+ Q AV E +LV+AG GSGKT VL R +L+ G A P QI+ + F KAA Sbjct: 48 GLDADQCVAVTTTEGPVLVVAGPGSGKTRVLTHRVAYLIGSGRARPWQIVAVTFTNKAAR 107 Query: 256 EMDERIRERLHTED---ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 E+ ER+ L TE + A TFH+L + I+++ ++ + + + Sbjct: 108 EIRERLGGLLGTESAQLVQAGTFHSLCVRILRRDGYRIGLEPAFTIYDEEDQLALVKQAL 167 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 + + R L RL R + Q+ Sbjct: 168 RDLGLDPQRFS-------------------------PRMLLGRLSRAKNDQHSPSDLQSM 202 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRF 427 S ++ A + + + L+ AVDF L+ + + + + + Sbjct: 203 A-----------QSYWDEVAARVYERYAQYLQRAQAVDFDDLLLRTVELFTEYPDVLAHY 251 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 W+++ VDE+QD + + L+ L L VGD Q+IY + A + F Sbjct: 252 QDRWRYLQVDEYQDTNRLQYQLVRQLAS--GHRNLCVVGDPDQSIYSWRQADIRNILEFQ 309 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL------ 541 +F + L YR +I A+ I+ N ++++PL + N + LL Sbjct: 310 RDFPDATVIRLGRNYRSTPQIVAAADAVIRVNRQRIERPLWT-ENPPGPPIRLLACWDEQ 368 Query: 542 -DESQLDALLDKLSGYAK-PEERILILARYHHMRPASLEKAATR 583 + + + +D+L I +L R + + E R Sbjct: 369 QEAEMVVSEIDRLVRTGNARYRDIAVLYRINAQSRSVEEALVRR 412 Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 22/101 (21%) Query: 583 RWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEE 642 Q+ +T+HA+KG + V ++G++EG A E Sbjct: 593 EMSGDQVTLLTLHAAKGLEFPVVFLIGVEEGLLPHARALESEAELEEERRL--------- 643 Query: 643 RRLMYVALTRARHRVWALFNKEN----------PSPFVEIL 673 YV +TRA+ R++ + PS F++ L Sbjct: 644 ---FYVGITRAKERLYLSYCSSRNRFGLRERCLPSHFLDDL 681 >UniRef50_Q1DC55 ATP-dependent DNA helicase PcrA n=2 Tax=Cystobacterineae RepID=Q1DC55_MYXXD Length = 783 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 94/400 (23%), Positives = 162/400 (40%), Gaps = 53/400 (13%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN Q AV++G+ LLVL+GAGSGKT V+ R +L+ P +IL + F KAA Sbjct: 14 DLNAPQREAVLHGDGPLLVLSGAGSGKTRVITRRVAYLVKVHNVYPWRILAVTFTNKAAR 73 Query: 256 EMDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM ER+ + L + ++ TFH+ A I+++ ++ V + + + + Sbjct: 74 EMRERLVQLLGAQANELVVSTFHSAAAQILRREAEHVGLTRSFVIYDDSDQLNVVKRAMR 133 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 + + Q R + R+D+ + R+ Q Sbjct: 134 EAGIESMQ---------------------------PREILHRIDQEKNAARLPEHMQVA- 165 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FI 428 +R +L+ + A++ L+A NAVDF L+ + + + Sbjct: 166 ----------PGDERGQLVRKVYAAYQERLRAANAVDFGDLLLLLVTLFRTRPDVLENYR 215 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 + H+LVDEFQD +P + ALL L L VGDD Q+IYR+ GA + F Sbjct: 216 RRFHHVLVDEFQDTNPVQYALLKQLAPP-PSANLVVVGDDDQSIYRWRGADVDNILGFPR 274 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD------ 542 + + L+ YR + I + A+ I++N +++K L S + +L+ Sbjct: 275 QYPGAKVVKLEQNYRSDQNILDAAHEVIRKNTRRMEKKLWSERQRGQTLNLMLNRDERAE 334 Query: 543 -ESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAA 581 + +L + + R + E Sbjct: 335 GQEVARQILALQREGFIKLSSMAVFYRANAQSRVLEEALR 374 Score = 87.1 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 33/126 (26%), Positives = 52/126 (41%), Gaps = 20/126 (15%) Query: 579 KAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFP 638 +A ++ MT+HA+KG + D V + G++E A + + + P Sbjct: 573 EADAEVGDGRVALMTLHAAKGLEFDAVFLTGMEENVFPHSRAVKSESTFLNEVASADGEP 632 Query: 639 D---AEERRLMYVALTRARHRVWALFNKEN----------PSPFVEI-------LKNLDV 678 AEERRL YV TRAR R++ + PS F+ + +V Sbjct: 633 SEEMAEERRLCYVGFTRARKRLFVSLAQCRSLFGELRYNAPSRFLRDVPPALFGISEQEV 692 Query: 679 PVARKP 684 P A +P Sbjct: 693 PEAPRP 698 >UniRef50_Q04T79 ATP-dependent DNA helicase n=6 Tax=Leptospira RepID=Q04T79_LEPBJ Length = 730 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 91/400 (22%), Positives = 163/400 (40%), Gaps = 52/400 (13%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN Q +AV+ +L+LAGAGSGKT V+ R LL ++I L F KAA Sbjct: 8 GLNEEQKKAVLQITGPVLILAGAGSGKTRVITHRIANLLVNHGI--DRICALTFTNKAAA 65 Query: 256 EMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM ER++ + ++ +TFH+L L+I+++ + S E + + K Sbjct: 66 EMVERVKNLVPFLPTNLQIKTFHSLCLYILRREAFFFGFDSAFTVYDTTLQESLLKQVVK 125 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 S K S L ++S G + +M Sbjct: 126 DLSLDPKFYK-----------------------------PSMLGNYIS------GLKDKM 150 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRFI 428 ++ ++ + K ++ + K ++ A A DF LI + + + +K ++ Sbjct: 151 LSPETYLEKEGRTDFSKTVSAIYKEYEKRKDANRAFDFGDLIWKTVQLFQKSPDAIAKYR 210 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 W++++VDE+QD + + L+ L + + L VGDD Q+IY + GA + F + Sbjct: 211 HKWEYVMVDEYQDTNKVQYQLVLLLAGE--KRNLCVVGDDDQSIYSWRGADIGNILNFEK 268 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDES---Q 545 +F E L+ YR +S I A++ I N + +K + + V E+ + Sbjct: 269 DFPESTVIKLEENYRSSSNIILAASKVISNNTQRKQKEIFTNNPKGSPVVLNEFENESEE 328 Query: 546 LDALLDKLS---GYAKPEERILILARYHHMRPASLEKAAT 582 ++ ++ Y + I I R + E Sbjct: 329 AHGVITRIRSAYSYGTEYKNIAIFYRTNSQSRYFEEALRN 368 Score = 96.3 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 22/142 (15%) Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQAD 603 L L++ + Y K + + + + + E+ + ++ MT+H +KG + Sbjct: 505 ENLQELVNSIEEYEKNSDSPSLEEYLNQISLITSEEESKELTDY-VNLMTVHNAKGLEFK 563 Query: 604 YVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNK 663 V + GL+EG+ + +S F D EERRL YVALTRAR +++ + + Sbjct: 564 IVFLSGLEEGTFPHSMSLEDS-----------HFGDEEERRLFYVALTRAREQLFLSYCR 612 Query: 664 EN----------PSPFVEILKN 675 + PS F+ + Sbjct: 613 TSRKFGKVEDRIPSRFLSEIPE 634 >UniRef50_B0MU18 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B0MU18_9BACT Length = 813 Score = 336 bits (861), Expect = 2e-90, Method: Composition-based stats. Identities = 105/404 (25%), Positives = 174/404 (43%), Gaps = 49/404 (12%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 LN AQ AVVN + L++AGAGSGKT VL +R +++ +G +P IL L F KAA Sbjct: 7 KGLNQAQRDAVVNYDSPSLIIAGAGSGKTRVLTSRIAYMIEQG-VAPYNILALTFTNKAA 65 Query: 255 EEMDERIRERLHTED---ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 E+M ERI + L I TFH++ I++ ++++ + + + Sbjct: 66 EQMRERIAQMLPDGRHRYIRMGTFHSVFSRILRDNAERIGFPQSFTIYEPSDCKNLLKTI 125 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 K+ N D + LASR+ + + G A Sbjct: 126 VKEL-------------------------NLDDTKYKPAMLASRISYAKNCLVTPGAYLA 160 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GR 426 A+A + +I + + K A+DF L+ Q ++L R Sbjct: 161 NAGAAAEDR-----RMQIPEFGNIYNIYCARCKRNGAMDFDDLLLQTNILLRDCPDVTAR 215 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + +K+ILVDE+QD + + ++ L + +S+ + VGDD Q+IY F GA++ +F Sbjct: 216 YQEQFKYILVDEYQDTNYAQYVIIRRLSQLHSK--VCVVGDDAQSIYSFRGAKIENILSF 273 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQL 546 ++F L+ YR I E AN I++N +++K S + +K L + Sbjct: 274 KKDFPNAMIFKLEQNYRSTRTIVEAANSVIERNSKRMEKKCFSEGDMGEKIRVLRAYTDR 333 Query: 547 DA-------LLDKLSGYAKPEERILILARYHHMRPASLEKAATR 583 + L DK+ IL R ++ + +LE A R Sbjct: 334 EEAEMVVSDLRDKVRAAGDEWAEAAILYRTNN-QSQALEDALRR 376 Score = 84.4 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 67/179 (37%), Gaps = 24/179 (13%) Query: 509 GEVANR--FIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILIL 566 E+A R I + S + ++ + + + +G + EER I Sbjct: 492 LEIATRSGIIGAYRAENTPEATSALDNIEELLNSMQLFNEQREAEIRAGERQQEERATIE 551 Query: 567 ARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIM 626 + + + ++ MT+H++KG + +V IVGL+E FP+ Sbjct: 552 EWLQGVMLMTDMDKDDPQDRNKVTLMTVHSAKGLEYKFVYIVGLEENL--FPSQRAVESP 609 Query: 627 EEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNK----------ENPSPFVEILKN 675 + EERRL YVALTRA+ + + PS F+ + + Sbjct: 610 DG----------FEEERRLFYVALTRAKELATLSYAEMRFKWGNMEFSRPSCFLREIDS 658 >UniRef50_A8SMG4 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SMG4_9FIRM Length = 750 Score = 336 bits (861), Expect = 2e-90, Method: Composition-based stats. Identities = 88/392 (22%), Positives = 154/392 (39%), Gaps = 48/392 (12%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 LN Q AV + LLVLAGAGSGKT VL + + + S +IL + F KA Sbjct: 5 KGLNNKQLEAVEHFGSPLLVLAGAGSGKTKVLTTKIAYAVLEKNVSEYEILAITFTNKAG 64 Query: 255 EEMDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 +EM ERI + TFH++ I++ +K+ + +L + E Sbjct: 65 KEMKERIENIFKRDISSMWIGTFHSICSKILRFNIEKIGYSNNFTIYDRDDQKLVLKEIF 124 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 KQ ++ ++ + D K + +S ++ S Sbjct: 125 KQNLTWESVLGEFKNAII----------GIISDAKGKNVKSSEFSKYFS----------- 163 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----F 427 F ++ + K ++ L NA+DF LI + I + +K + Sbjct: 164 ------------FGNNTDVVEKIYKKYEEILIKNNALDFDDLIFKTIELFKKCPEVLDYY 211 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 +K+I VDE+QD + + ++ L + + AVGD Q+IY + GA +S F Sbjct: 212 SEKFKYIYVDEYQDTNDAQYEIIKLLASKYK--NVCAVGDIDQSIYGWRGANISNILNFE 269 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLD 547 +F + L+ YR +I + AN I+ N + +K L + G + + +++ Sbjct: 270 NDFPNSKIILLEENYRSTQKILDCANELIKNNVNRKEKNLWTKKEGGDEIIYKSYQNENY 329 Query: 548 ALLDKLSG------YAKPEERILILARYHHMR 573 ++ I +L R + Sbjct: 330 EAIEVAQNVSNLIFEGYNLSDIAVLYRANFQS 361 Score = 90.5 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 34/133 (25%), Positives = 54/133 (40%), Gaps = 22/133 (16%) Query: 553 LSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQE 612 L + + I +L Y + T + TIH++KG + V I+G+ E Sbjct: 514 LEEISNSYKGIKLL-EYLETNSLLSDIDKTEDSDDTVTLTTIHSAKGLEYKVVFIIGMDE 572 Query: 613 GSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKE-------- 664 G FP+ ++ L EERRL YVA+TRA+ +++ K Sbjct: 573 GI--FPSERSIKERDDGL---------EEERRLFYVAITRAKEKLFISSTKSMTMYGKLN 621 Query: 665 --NPSPFVEILKN 675 S FV+ + N Sbjct: 622 LYRVSSFVDEIIN 634 >UniRef50_D1CD72 UvrD/REP helicase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CD72_THET1 Length = 779 Score = 335 bits (860), Expect = 2e-90, Method: Composition-based stats. Identities = 98/422 (23%), Positives = 179/422 (42%), Gaps = 55/422 (13%) Query: 182 LTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASP 241 ++ Y D + + LN Q AV + +LVLAG GSGKT VL R +LL++G SP Sbjct: 1 MSNYPDIYSSILE-GLNDKQLEAVTAPDGPVLVLAGPGSGKTRVLTHRIAFLLSQG-VSP 58 Query: 242 EQILLLAFGRKAAEEMDERIRERLH-------TEDITARTFHALALHIIQQGSKKVPIVS 294 IL + F KAA EM ERI + +IT TFH++ ++++ + I Sbjct: 59 FNILAVTFTNKAAREMRERIERLVGGAFGSYEARNITMGTFHSICSRVLRRDGGAIGISP 118 Query: 295 KLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLAS 354 I + + + Q R + + Sbjct: 119 NFVIYDDDDQIRLIKQALNEIGLDEKQ-------------------------YAPRSIQA 153 Query: 355 RLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGL 414 R+ S + ++ ++S +EI A + + ++ L+ AVDF L Sbjct: 154 RISSAKSALLDPEDYSSQGVSSYFDEI----------AARVYRRYQQLLEINQAVDFDDL 203 Query: 415 IHQAIVILEKG-----RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDW 469 + + +++ + ++ W+++LVDE+QD + + L+ L +++ +F VGD+ Sbjct: 204 LMKVVLLWKSYPDILQQYRDRWQYVLVDEYQDTNRAQYMLINLLTQEHR--NIFVVGDED 261 Query: 470 QAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS 529 Q IY + A + F ++ E + L+ YR I +VA+ I N +L++P Sbjct: 262 QGIYSWRAADIRNILNFERDYPEAKVILLEQNYRSYQEILDVASHIISSN--RLRRPKKL 319 Query: 530 LTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 TN A+ + E+ + D+ S A+ R+ L Y + A + + ++ ++ Sbjct: 320 WTNKSGGALVRVREAYDEQ--DEASYIAREISRLTSLGEYTYSDFAVMYRTNSQSRPVEE 377 Query: 590 DF 591 F Sbjct: 378 AF 379 Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 38/99 (38%), Gaps = 22/99 (22%) Query: 582 TRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAE 641 + Q+ +T+HA+KG + V I+G +EG + E Sbjct: 572 MQNNGNQVTLITLHAAKGLEYKVVFIIGFEEGLLPHARSMDRES------------DIEE 619 Query: 642 ERRLMYVALTRARHRVWALFN----------KENPSPFV 670 E RL YV +TRA +++ + PS F+ Sbjct: 620 ECRLAYVGVTRAMEKLYISYAFHRNVFGATQTNVPSRFL 658 >UniRef50_C8S459 UvrD/REP helicase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S459_9RHOB Length = 850 Score = 335 bits (859), Expect = 4e-90, Method: Composition-based stats. Identities = 97/395 (24%), Positives = 163/395 (41%), Gaps = 56/395 (14%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNP Q AV+ + +L+LAGAG+GKT L AR LL G+A P +IL + F KAA Sbjct: 31 DLNPEQRAAVLAPDGPVLMLAGAGTGKTKALTARIVHLLTTGKARPNEILAVTFTNKAAR 90 Query: 256 EMDERIRERLHTED--ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM +R+ L + TFH++++ I+++ ++ V + S + Sbjct: 91 EMKDRVGRMLGQVEGMPWMGTFHSISVKILRRHAELVGLKSNFTILDTDDQIRLL----- 145 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 + + N + R LA +D W + +A Sbjct: 146 --------------------KQLIVAENIDEKRWPARLLAGLIDSWKN--------RAWT 177 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RFI 428 A P ++ R L + ++ L+A NA DF L+ + I + ++ Sbjct: 178 PAKVPSSEASAYNNRG---TELYQMYQDRLRALNATDFGDLLLHVVTIFQTHPDVLAQYQ 234 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 +++ILVDE+QD + + L L + + + VGDD Q+IY + GA++ F + Sbjct: 235 RWFRYILVDEYQDTNVAQYLWLRLLAQAHR--NICCVGDDDQSIYGWRGAEVGNILRFEK 292 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD---ESQ 545 +F L+ YR I A+ I N G+L K L + +K + E + Sbjct: 293 DFPGAHVVRLEQNYRSTPHILAAASAVIAANKGRLGKTLWTEREAGEKVRLIGHWDGEEE 352 Query: 546 LDALLDKLSGYAKPE--------ERILILARYHHM 572 + D+L + + + IL R H Sbjct: 353 ARWIGDELEALQRGTRAMDPHSLDDMAILVRASHQ 387 Score = 88.2 bits (217), Expect = 9e-16, Method: Composition-based stats. Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 20/107 (18%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 ++ MT+HA+KG + V + G ++G + ES ++ EERRL Y Sbjct: 634 KVSIMTLHAAKGLEFPVVFLPGWEDGLFPSQRSMDESGLKGV----------EEERRLAY 683 Query: 648 VALTRAR----------HRVWALFNKENPSPFVEILKNLDVPVARKP 684 V +TRA RV+ + PS F++ L V V P Sbjct: 684 VGITRAEALCTISFAANRRVYGQWQSALPSRFIDELPEAHVEVLTPP 730 >UniRef50_C1A8M7 ATP-dependent DNA helicase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8M7_GEMAT Length = 820 Score = 334 bits (856), Expect = 8e-90, Method: Composition-based stats. Identities = 96/405 (23%), Positives = 155/405 (38%), Gaps = 54/405 (13%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 + LNP Q AV + + LVLAGAGSGKT VL R L+ +P +IL + F KA Sbjct: 26 TRGLNPGQTEAVFHDDGPALVLAGAGSGKTRVLTTRIARLIGTMNVAPHEILAVTFTNKA 85 Query: 254 AEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 A EM RI + L + + TFHAL +++ + V Sbjct: 86 AGEMRARIAKFLGHEPKGMWCGTFHALGARMLRGVAPLVGREQNFTIYDEDD-------- 137 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 ++ + N E + + S + + Sbjct: 138 -----------------AIGAVKRVMERRNLSPKEFAPKAILSAISSAKN---------- 170 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGR 426 + S E R+ +A + + AL+ NAV F L+ + LE + Sbjct: 171 -ALISPSEFARNARDTFATAVAGVYTDLEVALQQANAVTFDDLLVLPVRALETDEALRAH 229 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + ++++LVDE+QD + + + + + VGDD Q+IY + GA + F Sbjct: 230 YQRRFRYLLVDEYQDTNAAQYRFVQLM--GGGYRNVMVVGDDDQSIYGWRGADIRNILDF 287 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL----- 541 +F L+ YR + +AN I +N + K L + T +AVTL+ Sbjct: 288 ERDFPGARIVRLEENYRSTPNVLALANAVIAENTERRGKTLRA-TRPAGEAVTLIEALDE 346 Query: 542 -DESQLDA--LLDKLSGYAKPEERILILARYHHMRPASLEKAATR 583 DE+ A +L ++S IL R + A + R Sbjct: 347 RDEADFIAETILTRMSRSDLARRDCAILYRTNAQSRAIEDAFRRR 391 Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 22/96 (22%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + MT+H +KG + V + GL++G FP A + EERRL YV Sbjct: 575 VTCMTMHNAKGLEFPLVFVCGLEDGL--FPLARAAE----------DPAQLEEERRLFYV 622 Query: 649 ALTRARHRVWALFNKEN----------PSPFVEILK 674 +TRA +++ ++ PS F+E++K Sbjct: 623 GITRAEEKLYLTCAEQRRRNGELMYSMPSRFLEVIK 658 >UniRef50_B5YHS6 ATP-dependent DNA helicase PcrA n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YHS6_THEYD Length = 699 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 98/410 (23%), Positives = 159/410 (38%), Gaps = 50/410 (12%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 + LNPAQ AVV E LLVLAGAGSGKT V+ + +L P I + F Sbjct: 2 KDFPLRDLNPAQQEAVVYCEGPLLVLAGAGSGKTRVITYKYAYLTKSKGLLPSSIFTVTF 61 Query: 250 GRKAAEEMDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 KAA+EM ERI + + + TFH+L + I++ + Sbjct: 62 TNKAADEMKERIFKMCNGNWKNTWIGTFHSLCVRILRAHIDNIGYKRDFIIYDDDDQAGL 121 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 I K + +A K + S + N E + Sbjct: 122 IKRILKDLNMHEALCKCVV------TKISNLKSNLITPEDYISNIEGY------------ 163 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-- 425 + + + + ++ LK NA+DF LI I + + Sbjct: 164 -------------------EFEERLGRIYMRYQNELKRYNALDFDDLILCVIKLFNENED 204 Query: 426 ---RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 R+ +K+ILVDEFQD + + LL L + + + AVGDD Q+IY+F GA + Sbjct: 205 LLRRYSEQFKYILVDEFQDTNKSQYMLLQLLCRYHK--NICAVGDDDQSIYKFRGANIHN 262 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD 542 F ++F + + L+ YR I ++ I +N + K L + + +K Sbjct: 263 ILNFEKDFPDTKIVKLEQNYRSTKHIILASSAMISRNTMRKPKILWTERDWGEKIFYC-- 320 Query: 543 ESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFM 592 QL+ ++ AK + + + Y + A L + + L+ Sbjct: 321 --QLNNEEEEAKYIAKNIKELYLKGDYEYKDFAILYRLVLQARALEEALR 368 Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats. Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 22/99 (22%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 K + +T+HA+KG + V I G +EG + A + F EERR Sbjct: 532 KKNYVSLLTLHAAKGLEFPVVFIAGCEEGILPYFKALE------------DPFELQEERR 579 Query: 645 LMYVALTRARHRVWALF----------NKENPSPFVEIL 673 L YV +TRA++ ++ K+ S F++ + Sbjct: 580 LFYVGMTRAKNLLFITSVKQRKLYSKVQKQETSSFIKDI 618 >UniRef50_A0LDC5 ATP-dependent DNA helicase, Rep family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDC5_MAGSM Length = 673 Score = 333 bits (854), Expect = 1e-89, Method: Composition-based stats. Identities = 95/403 (23%), Positives = 166/403 (41%), Gaps = 54/403 (13%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q +AV + L+VLAGAGSGKT VL R W++ + +ASPE++L + F KAA+E Sbjct: 9 LNAPQRQAVTTLDGPLMVLAGAGSGKTRVLTRRLAWIIQQQQASPEEVLAVTFTNKAAKE 68 Query: 257 MDERIRERLH------TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 M R++ L TFH ++ +++Q + ++ ++ E Sbjct: 69 MRNRVQALLGLDAPAQAHRFWIGTFHGMSARMLRQYADRLGFERDFTILDSSDQERLFKR 128 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 ++ F D +RL + RW Sbjct: 129 LCEELG-------------------------FADAYWTPKRLTHTIGRWKDDGIRPQDLT 163 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR---- 426 I A E R + + + ++ AL NA+DF L+ + + ++ Sbjct: 164 DREIRKAWERAR---------IQQMYERYQQALLQSNAMDFGDLLLHCLQLWQQEPAILA 214 Query: 427 -FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 F ++++LVDE+QD + + + AL + L VGDD Q+IY + GA++ Sbjct: 215 AFQQRFRYLLVDEYQDTNHVQYRWICALSGLHQ--NLCVVGDDDQSIYSWRGARIENILK 272 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL---- 541 F E+F + + L+ YR + I + A+ I N G+++K L + + A+ Sbjct: 273 FEEDFPQTKIIRLEQNYRSSGNILKAASGLINHNKGRMEKQLWT-EDAQGDAIHFYQAEN 331 Query: 542 DESQLDALLDKLSGY--AKPEERILILARYHHMRPASLEKAAT 582 DE + + ++ A ++ IL R + E Sbjct: 332 DEDEARFVASEILTLCPAGDYQQAAILVRTARQTRSLEEGLMR 374 Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 20/97 (20%) Query: 587 LQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLM 646 ++ T+HA+KG + +V +VG++E A E + EERRL Sbjct: 547 NRVVISTLHAAKGLEFPWVFLVGVEEDVMPHKLALTEQP----------EIGLEEERRLA 596 Query: 647 YVALTRARHRVWALFNKENP----------SPFVEIL 673 YV +TRA+ R++ + S F++ L Sbjct: 597 YVGMTRAKQRLYLTMARRRWLFNKPVMPIKSRFLKEL 633 >UniRef50_Q83GZ5 ATP-dependent DNA helicase n=2 Tax=Tropheryma whipplei RepID=Q83GZ5_TROWT Length = 743 Score = 333 bits (854), Expect = 1e-89, Method: Composition-based stats. Identities = 102/409 (24%), Positives = 164/409 (40%), Gaps = 39/409 (9%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 LNP Q V +LL+ AGAGSGKT VL R LA GEAS +QIL + F KAA Sbjct: 9 KGLNPQQVEGVCYRGPTLLISAGAGSGKTKVLTHRIAGFLATGEASCDQILAITFTNKAA 68 Query: 255 EEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM R + + D+ TFH++ + I+++ + AA I + Sbjct: 69 SEMRHRTGDLVGLSVRDMQISTFHSVCVRILRECVGHLGKAKNFTIYDAADQRAIIKQIC 128 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 + A Q + + + R LAS Sbjct: 129 QSTDTFGLTASMVAS------QIGLLKNQMHTPDTYSRCLASN----------------- 165 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----F 427 ++ + + +R + + + + ++ LK NA DF LI + + +L+K + Sbjct: 166 --STNGNSVTSITLQREQFILHVFRRYQEILKEANAFDFDDLISETVFLLQKSPEISAMY 223 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQN-SQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + WK++LVDE+QD + + L+ L K + S +L AVGD Q+IY F GA ++ F Sbjct: 224 RNRWKYLLVDEYQDTNHAQYRLILELTKGDKSDMSLTAVGDSDQSIYAFRGADIANIVNF 283 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL---DE 543 +F + L+ YR I AN I N + K L S +K + E Sbjct: 284 ENDFPDCHTILLEQNYRSCQNILLAANALISNNQNRKDKNLWSELGAGEKVIAYCASSAE 343 Query: 544 SQLDALLDKLSGYAKPEER---ILILARYHHMRPASLEKAATRWPKLQI 589 + + D++ E I + R + E + ++ Sbjct: 344 EEGRFVADRVRHLVDQGESLSDIAVFYRSNTQSRVIEESLIRQSIPYRV 392 Score = 87.1 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 30/117 (25%), Positives = 47/117 (40%), Gaps = 21/117 (17%) Query: 566 LARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESI 625 L+ + + QI MT+H +KG + D+V + GL+EG + +E Sbjct: 541 LSDFMTNIALMTSYDQSDDAPGQITLMTLHMAKGLEFDFVFLTGLEEGILPHEMSLKEKN 600 Query: 626 MEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN---------PSPFVEIL 673 E EERRL YV +TRA+ + F+ PS F + + Sbjct: 601 GIE------------EERRLAYVGMTRAKKVLHLSFSSYRKRYTDGVRLPSRFWDEI 645 >UniRef50_C7M3I8 UvrD/REP helicase n=3 Tax=Bacteroidetes RepID=C7M3I8_CAPOD Length = 789 Score = 332 bits (852), Expect = 2e-89, Method: Composition-based stats. Identities = 94/417 (22%), Positives = 171/417 (41%), Gaps = 50/417 (11%) Query: 188 FFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLL 247 F +++ES LN Q AV+ + ++V+AGAGSGKT VL R L+ G IL L Sbjct: 4 FLKELES--LNAPQRAAVLQKDGPIIVIAGAGSGKTRVLTYRIANLMREG-VDAFNILAL 60 Query: 248 AFGRKAAEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARH 304 F KAA EM +RI + +++ TFH++ I++ + K+ Sbjct: 61 TFTNKAANEMKKRIASLVGNNEAKNLWMGTFHSVFAKILRIEADKLGYPQNFTIYDTQDS 120 Query: 305 ELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMR 364 + I K+ K + + +++Q R++S + +++ Sbjct: 121 QRLINGIIKEMELDK---------------------DIYKYKRIQSRISSFKNSLITV-- 157 Query: 365 MHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK 424 + PE + R + + + + A+DF L+ + +L Sbjct: 158 -------RAYFNNPELMEADAMARQPRLGEIYQEYVDRCFKAGAMDFDDLLLKTNELLNL 210 Query: 425 -----GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQ 479 ++ + +++ILVDE+QD + + ++ AL + + VGDD Q+IY F GA Sbjct: 211 YPDVLAKYQNRFRYILVDEYQDTNHSQYLIVKALADRFH--NICVVGDDAQSIYAFRGAN 268 Query: 480 MSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKA-- 537 ++ F ++ E + L+ YR I E AN I+ N +L+K + + + Sbjct: 269 INNILNFKNDYPEAKEYKLEQNYRSTKNIVEAANSVIEHNKIRLEKVVFTENELGEPIKV 328 Query: 538 ---VTLLDESQLDA--LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 T DE + A + + + P +L R + A + R +I Sbjct: 329 HRSPTDADEGRFVASSIFENKMQHQLPNGNFAVLYRTNSQSRAIEDALRKRDIPYRI 385 Score = 93.6 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 71/180 (39%), Gaps = 30/180 (16%) Query: 512 ANRFIQQNPGQLKKPLNSLTN--GDKKAVTLLDESQLDALLDKLSGYAKPEERIL----I 565 AN F + Q+ K L D + ++ +L+ + + + +E + Sbjct: 486 ANAF--EVAEQVAKKTGLLQEFKKDGTPEGIAKMENIEEMLNGMKDFVEGQEDVADSRAS 543 Query: 566 LARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESI 625 L+ Y + + ++ MTIH +KG + YV +VG++E FP+A Sbjct: 544 LSEYLEDVALATDMDKEIGDDDRVALMTIHLAKGLEFPYVYVVGMEEDL--FPSAMSIQS 601 Query: 626 MEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKN 675 + EERRL YVALTRA + + + + PS F+E + Sbjct: 602 RNDL----------EEERRLFYVALTRAEKQAYLTYAENRYRWGKLSDAEPSRFIEEIDE 651 >UniRef50_A6NZ65 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NZ65_9BACE Length = 830 Score = 332 bits (851), Expect = 3e-89, Method: Composition-based stats. Identities = 94/441 (21%), Positives = 161/441 (36%), Gaps = 90/441 (20%) Query: 191 QVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGE------------ 238 +++ LNP Q +A + E LL+LAGAGSGKT+VL+ R L+ G Sbjct: 30 ELDYQNLNPEQRKAALATEGPLLLLAGAGSGKTTVLIHRIANLMKYGRGSDCDEVPEWVT 89 Query: 239 ------------------------------ASPEQILLLAFGRKAAEEMDERIRERLHT- 267 A P I+ + F KAA E+ ER+ L Sbjct: 90 AEDLAFLEGYVAHPDPEKKAEQERLCRVDPAVPWSIIAITFTNKAAGELKERLERMLGPS 149 Query: 268 -EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWR 326 DI A TFH+ + I+++ ++ A E I + K Sbjct: 150 ANDIWASTFHSACVRILRRDIDRLGFSKSFTIYDTADAERVIKDIIKDF----------- 198 Query: 327 QWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFS 386 N D + + + R M++ AE S Sbjct: 199 --------------NLDDKAFPAKSIVGYISRAKDAMKLGADYLAECEKSG--------D 236 Query: 387 KRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRFISPWKHILVDEFQD 441 R+ +A + ++ L+ NA+DF +I + +L+ + + ++++L+DE+QD Sbjct: 237 YRLIKIAKVYVEYEKRLRDANALDFDDIILHTVRLLKEFDEVREYYQRKFRYVLIDEYQD 296 Query: 442 ISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTT 501 + + L + L + VGDD Q+IYRF GA + +F + L+ Sbjct: 297 TNNLQYLLASTLA--GGYENICVVGDDDQSIYRFRGATIENILSFESQYKGARVIRLEQN 354 Query: 502 YRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL---DESQLDALLDKLSGY-- 556 YR I E +N I+ N G+ K L + K + + + ++ G Sbjct: 355 YRSTKNILEASNAVIRNNEGRKGKELWTDHGEGDKVQCYTAMNEHDEAQYVAAQILGSFS 414 Query: 557 -AKPEERILILARYHHMRPAS 576 + + +L R + Sbjct: 415 AGRHWKDHAVLYRMNAQSNQI 435 Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 38/105 (36%), Gaps = 23/105 (21%) Query: 591 FMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVAL 650 MT+H++KG + + + FP EE RRL YVA+ Sbjct: 624 MMTMHSAKGLEFPV--VFVVGVEEGIFPGIRAIGEAEEMEEE----------RRLCYVAM 671 Query: 651 TRARHRVWAL----------FNKENPSPFVEIL-KNLDVPVARKP 684 TRA+ +++ N PS F+ + + R P Sbjct: 672 TRAKEKLYMTCASQRMLFGRTNNNRPSRFLGEIPEEYVEKSGRLP 716 >UniRef50_B2UPY5 UvrD/REP helicase n=2 Tax=Verrucomicrobia RepID=B2UPY5_AKKM8 Length = 669 Score = 332 bits (850), Expect = 3e-89, Method: Composition-based stats. Identities = 97/391 (24%), Positives = 156/391 (39%), Gaps = 47/391 (12%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV + LV+AGAGSGKT L R WLL G P ILLL F KAA E Sbjct: 26 LNEEQYAAVSSEPGPALVIAGAGSGKTRTLTYRVAWLLDHG-TDPWNILLLTFTNKAARE 84 Query: 257 MDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M ER+R + + + + TFH++A I++Q ++ + + + I K Sbjct: 85 MTERVRSLIPLDLSRLWSGTFHSIANRILRQHAEYLGYTPAFTIMDSDDRKSMIKSVVKS 144 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 D++ + L SL G I Sbjct: 145 LK--------------------------LDEKSTRFPKPEVLSSLFSLADNEGA----NI 174 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FIS 429 E S + + + + + N++DF L+ + + ++ + S Sbjct: 175 RETQENAYPYLSNHLDAILEVHDQYVARKQETNSMDFDDLLLNVVRLFQEQEHLRALYGS 234 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 ++HILVDE+QD + ++ L+ L +++ Q L VGDD Q+IY + GA M +F Sbjct: 235 RFQHILVDEYQDTNYLQSRLIDMLAREHGQ--LMVVGDDAQSIYSWRGADMENILSFTTR 292 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL-------LD 542 + + ++T YR I E++N I N Q++K L S+ + L + Sbjct: 293 YPAAKTFKIETNYRSVPEILELSNAAIAANEVQIEKQLRSVRPTGEMPPALVPLNDDRMQ 352 Query: 543 ESQLDALLDKLSGYAKPEERILILARYHHMR 573 + + L I +L R H Sbjct: 353 AKFVVQRIRDLIEEGTDPSEIAVLYRAHFHS 383 Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 48/119 (40%), Gaps = 21/119 (17%) Query: 565 ILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARES 624 L++ + E AA + + TIH +KG + V ++GL +G + Sbjct: 549 FLSQLSLLGNTDDESAAADFSGGSVTLSTIHQAKGLEWSVVFLIGLCDGMFPHQRVIDDG 608 Query: 625 IMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN-----------PSPFVEI 672 + EERRL YV +TRA+ +++ + + N PS F++ Sbjct: 609 DLAGL----------EEERRLFYVGITRAKDQLYLTYPRWNCRAQGGTFMQMPSRFLDE 657 >UniRef50_Q67KI7 ATP-dependent DNA helicase n=1 Tax=Symbiobacterium thermophilum RepID=Q67KI7_SYMTH Length = 825 Score = 331 bits (849), Expect = 5e-89, Method: Composition-based stats. Identities = 96/452 (21%), Positives = 161/452 (35%), Gaps = 103/452 (22%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARG----------------- 237 S LN Q AV++G+ LL+LAGAGSGKT V+ R L+ G Sbjct: 7 SGLNEQQREAVLHGQGPLLILAGAGSGKTRVIAHRIAHLILFGPEYDPDAPPPPGLTADD 66 Query: 238 -------------------------EASPEQILLLAFGRKAAEEMDERIRERLHT--EDI 270 P +IL + F KAA EM ER+ + + ++ Sbjct: 67 LEALRLAVEGPGPIDTGAIAHLLGGGIDPWRILAITFTNKAAAEMRERVEQLVGPRAREV 126 Query: 271 TARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ--CSEKKAQAKGWRQW 328 A TFH+ + ++++ +++ A + I + K+ SE++ Q Sbjct: 127 WAATFHSTCVRMLRRDIERLGYGRNFVILDAEDQQAVIRDCLKRLGLSERQFQPGAVLGT 186 Query: 329 LTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKR 388 ++ + F D R Sbjct: 187 ISNAKNAMLDPRRFADRAGDYWR------------------------------------- 209 Query: 389 IKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRFISPWKHILVDEFQDIS 443 + +A + ++ L++ NA+DF L+ +A+ +LE + + +++ILVDE+QD + Sbjct: 210 -QQVAKVYALYQEQLRSGNALDFDDLLLKAVELLERFDDVREYYQRKFEYILVDEYQDTN 268 Query: 444 PQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYR 503 + + L + + L VGDD Q IY + GA +S F F L+ YR Sbjct: 269 HVQNRWVFLLAGE--KQNLAVVGDDDQGIYSWRGADISNILEFEAQFPGCRTIKLEQNYR 326 Query: 504 FNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL--LDESQLDALLDK--------- 552 I A ++ N G+ +K L + DE A + + Sbjct: 327 STQNILSAAYAVVRHNTGRKEKRLWTAAGPGDPVYHFTAADERDEAAFVAREVERLVAEG 386 Query: 553 -LSGYAKPEERILILARYHHMRPASLEKAATR 583 G + +L R H A E R Sbjct: 387 LPDGTRLDYQDFAVLYRTHAQSRALEEAMVRR 418 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 22/98 (22%) Query: 586 KLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRL 645 + ++ MT+H++KG + V +VGL+EG A ++ EERRL Sbjct: 601 QNKVTLMTLHSAKGLEFPVVFLVGLEEGVFPHNRALT------------DEVQMEEERRL 648 Query: 646 MYVALTRARHRVWAL----------FNKENPSPFVEIL 673 YV +TRAR R++ N PS F+ + Sbjct: 649 CYVGMTRARLRLYLTNAVSRNLWGQSNYNAPSRFLLEI 686 >UniRef50_Q2GE51 Helicase, UvrD/Rep family n=2 Tax=Neorickettsia RepID=Q2GE51_NEOSM Length = 630 Score = 331 bits (849), Expect = 5e-89, Method: Composition-based stats. Identities = 98/414 (23%), Positives = 165/414 (39%), Gaps = 47/414 (11%) Query: 187 DFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILL 246 D Q LN Q AV +L+LAGAG+GKT LV R L+ G A P QI+ Sbjct: 6 DHLAQSTIMNLNDEQRLAVETVNGPVLILAGAGTGKTKTLVHRIAHLIRSGYAHPNQIMA 65 Query: 247 LAFGRKAAEEMDERIRERLHTEDI-TARTFHALALHIIQQGSKKVPIVSKLENDTAARHE 305 + F KAA EM +R+ E + TFHA A I++ ++K+ Sbjct: 66 VTFANKAANEMIQRVNEIVGEMKFHWIGTFHAAAAKILRIEAEKLGFKPDFTILDVDDQ- 124 Query: 306 LFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRM 365 + +K EKK +A D+ L ++ S + W Sbjct: 125 --VRMLQKVAQEKKIEA----------------------DKALLKKYLSVISAWKDKAFT 160 Query: 366 HGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG 425 + A+ + K + ++ LK N++DF L+ + + K Sbjct: 161 PSRVRFNNAAN---------TWFEKQALSVYDTYQKKLKENNSMDFGDLLMHNVTLFNKD 211 Query: 426 -----RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQM 480 ++ +++I+VDE+QD + + L L +++S + VGDD Q+IY + GA++ Sbjct: 212 AETLEKYKEKFRYIMVDEYQDTNLCQYLWLRLLAQKHS--NICCVGDDDQSIYGWRGAEV 269 Query: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSL--TNGDKKAV 538 F ++F + L+ YR ++I A+ I+ N +L K L + + + Sbjct: 270 GNILRFAKDFEGAKVIKLEQNYRSTNKILTAAHNIIKNNQSRLTKKLWTAYPGGEEIQIF 329 Query: 539 TLLDESQLDALLDKLSGYAK---PEERILILARYHHMRPASLEKAATRWPKLQI 589 T +D Q + ++ K IL R A E A ++ Sbjct: 330 TYMDSEQEARAIIRMIKERKLLCRYSDTAILVRAGFQTRAFEEAAIHENVPYRV 383 Score = 76.3 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 39/116 (33%), Gaps = 22/116 (18%) Query: 571 HMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEAL 630 E A ++ MT+HASKG + + V + G ++G+ + Sbjct: 527 QHVSLLTESDAQINNSDAVNMMTLHASKGLEFEQVFLPGWEDGTFPH------------V 574 Query: 631 LPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNL 676 EERRL YV +TRA+ + S F+ L Sbjct: 575 RSLCSTEQIEEERRLAYVGITRAKRFLTITSAHRRLIRNSWQNTVKSRFMLELAEK 630 >UniRef50_D1PL59 ATP-dependent DNA helicase n=4 Tax=Ruminococcaceae RepID=D1PL59_9FIRM Length = 871 Score = 331 bits (849), Expect = 5e-89, Method: Composition-based stats. Identities = 95/453 (20%), Positives = 174/453 (38%), Gaps = 91/453 (20%) Query: 178 TEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARG 237 D + + + + LNP Q +AV E LL+LAGAGSGKT+VLV R ++ G Sbjct: 4 ITQEYIALRDQYIESKFTRLNPVQRQAVFTTEGPLLILAGAGSGKTTVLVNRIANIIRFG 63 Query: 238 ----------------------------------------EASPEQILLLAFGRKAAEEM 257 A P +L + F KAA E+ Sbjct: 64 SAHGSKELPRTVTQQDLEDLRATVQSGRDLPRETAYLAVRPARPWNVLAITFTNKAAGEL 123 Query: 258 DERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 ER+R L D+ A TFH+ + I+++ ++++ + + + + K Sbjct: 124 KERLRAMLGETMGGDVNASTFHSACVRILRRDAERIGFPKSFTIYDSDDQQRVLKQIYKD 183 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 + + F + +++S D+ +S ++ Sbjct: 184 ---------------------KMIDDKFLPIKSAVSQISSYKDKLMS--------PEDVA 214 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRFIS 429 A P + + L++ + + G LK A+DF LI+ + +L+ + + + Sbjct: 215 AETPRD------TKAALISKIYTTYAGRLKTAGAMDFDDLIYHTVRLLQTDAEAREYYQN 268 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 +++++VDE+QD S + L+ L + VGDD Q+IY+F GA + F + Sbjct: 269 KFRYVVVDEYQDTSIAQFHLVRLLA--GGTNNVCVVGDDDQSIYKFRGATIENILNFEQV 326 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKA---VTLLDESQL 546 F + L+ YR S I AN I+ N G+ K L + K ++ + Sbjct: 327 FTGAKTIRLEQNYRSTSNILNAANSVIKNNTGRKGKTLWTEKGDGDKVHHYTAASEQDEA 386 Query: 547 DALLDKLSGYAKPEERI---LILARYHHMRPAS 576 + D + + + + +L R + Sbjct: 387 SHIADVIGEHLREGAHLRDHAVLYRMNAQSNPI 419 Score = 98.2 bits (243), Expect = 9e-19, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 59/151 (39%), Gaps = 22/151 (14%) Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQAD 603 L L+ + YA L+ + + + + MTIH++KG + Sbjct: 561 ENLGQLVSSVKTYADQNGEDATLSGFLEEVALISDLDSYDQDADSVTMMTIHSAKGLEFP 620 Query: 604 YVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNK 663 YV +VG+++G FP E+ EERRL YVA+TRA+ ++ ++ Sbjct: 621 YVFVVGMEDGI--FPGDMARYNEEDM----------EEERRLCYVAITRAKKELYLSTSR 668 Query: 664 EN----------PSPFVEILKNLDVPVARKP 684 PS F+ + + + P Sbjct: 669 SRLIFGQTRRNLPSCFLSEIDPGLMEETQSP 699 >UniRef50_A7NGD4 UvrD/REP helicase n=11 Tax=Chloroflexi RepID=A7NGD4_ROSCS Length = 759 Score = 331 bits (848), Expect = 7e-89, Method: Composition-based stats. Identities = 88/404 (21%), Positives = 158/404 (39%), Gaps = 54/404 (13%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNPAQ +AV +LVLAG GSGKT VL R +L+ P IL + F KAA Sbjct: 10 GLNPAQRQAVTAAPGPVLVLAGPGSGKTRVLTRRVAYLIGVHGVDPHHILAVTFTNKAAR 69 Query: 256 EMDERIRERLHTED---ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM +R+ + L + +T TFH++ +++ S + + Sbjct: 70 EMRDRLEKLLGPGEAAALTVGTFHSICARFLRRDSIHLGRERDFAIYDTDDQLRVMKRVL 129 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 + N + + R + + + R + + Sbjct: 130 RDL-------------------------NLDEKKHAPRAIHAAISRAKNELIDPDAYS-- 162 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RF 427 R S +++A ++ L+ NA+DF L+ + + + E+ R+ Sbjct: 163 ---------RHAHSYFEEVVARCFARYQELLRGANALDFDDLLVETVRLFEEHPAVLERY 213 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + +L DE+QD + + LL L ++ +F VGD+ Q++Y F GA + +F Sbjct: 214 QERYGFLLADEYQDTNRAQYVLLKQLASRHH--NIFVVGDEDQSVYAFRGADIRNILSFE 271 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD----- 542 ++ E + L+ YR I +VA I ++ + + NG+ V +++ Sbjct: 272 RDYPEAQVILLEQNYRSTQAILDVAQAVINRSAQRRRDKRLWTRNGEGVLVQVIEGYDQD 331 Query: 543 ---ESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATR 583 + + ++G A I I+ R + A E R Sbjct: 332 EEAQLVAGEIARLIAGGAYQPGDIAIMYRTNAQSRAIEEALIAR 375 Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 22/99 (22%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 + + +T+H +KG + V +VGL+EG +A + + EERR Sbjct: 569 ERNAVTCITLHQAKGLEFPVVFLVGLEEGLLPHARSADDRDALD------------EERR 616 Query: 645 LMYVALTRARHRVWAL----------FNKENPSPFVEIL 673 L YV TRA+ R++ L PS F+ + Sbjct: 617 LFYVGATRAKERLYLLHAFRRATYGRTEIATPSRFLHDI 655 >UniRef50_A1TNG2 ATP-dependent DNA helicase UvrD n=11 Tax=cellular organisms RepID=A1TNG2_ACIAC Length = 818 Score = 330 bits (847), Expect = 9e-89, Method: Composition-based stats. Identities = 96/397 (24%), Positives = 159/397 (40%), Gaps = 58/397 (14%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV L+LAGAGSGKT VL R WLL G ASP IL + F KAA+E Sbjct: 35 LNDEQLAAVTLPAGHALILAGAGSGKTRVLTTRIAWLLQNGYASPGSILAVTFTNKAAKE 94 Query: 257 MDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M R+ L + + TFH L +++ K + + + + KQ Sbjct: 95 MTARLSAMLPVNVRGMWIGTFHGLCNRLLRAHHKSAGLPATFQILDTQDQLSAVKRLCKQ 154 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 + D+E+ ++ ++S + G ++ Sbjct: 155 FN--------------------------IDEERFP---PKQMAYFISGCKEEGLRPGDVD 185 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRFIS 429 A + + + L + ++ + E VDF L+ ++ +L + + Sbjct: 186 ARDADGRKKV---------ELYQLYEEQCQREGVVDFGELMLRSYELLRDNDPIRAHYQR 236 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQ------NSQTTLFAVGDDWQAIYRFSGAQMSLT 483 ++HILVDEFQD + + A L + + ++ AVGDD Q+IY F GA++ Sbjct: 237 RFQHILVDEFQDTNKLQYAWLKQIAGDVVDGRLVTHGSVLAVGDDDQSIYAFRGARVGNM 296 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL--- 540 F F + L+ YR S I + AN I N +L K L + + Sbjct: 297 QDFVREFDVRHQIKLEQNYRSYSNILDSANALISHNSRRLGKNLRTTQGPGEPVRVYEAP 356 Query: 541 LDESQLDALLDKLSGYAKPE----ERILILARYHHMR 573 D ++ ++D++ A+ + I +L R + Sbjct: 357 TDLAEAQWMVDEIRQLARNDGFERREIAVLYRSNAQS 393 Score = 93.2 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 22/107 (20%) Query: 579 KAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFP 638 + + + MT+HASKG + D V I G++EG + + E Sbjct: 614 DNQAQAGQDAVQLMTVHASKGLEFDAVFIGGMEEGLFPHENSMSDRDGLE---------- 663 Query: 639 DAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKN 675 EERRLMYVA+TRAR R++ ++ S F + L Sbjct: 664 --EERRLMYVAITRARKRLYLSHSQTRLLHGQTRYNIKSRFFDELPE 708 >UniRef50_A1BEA2 ATP-dependent DNA helicase PcrA n=2 Tax=Chlorobium RepID=A1BEA2_CHLPD Length = 734 Score = 330 bits (845), Expect = 1e-88, Method: Composition-based stats. Identities = 108/484 (22%), Positives = 184/484 (38%), Gaps = 71/484 (14%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN Q +AV E ++VLAGAGSGKT V+ R WL+ G AS + IL L F KAA Sbjct: 7 DLNDVQRQAVRATEGPVMVLAGAGSGKTRVITYRIAWLIKNGYASAKNILALTFTNKAAG 66 Query: 256 EMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM R+ L + TFH++ +++ + A + I Sbjct: 67 EMRHRVDVLLQQGSAGGLWIGTFHSIFARLLRNDIHLLGYDRNFSIFDADDSKSLI---- 122 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 + S+ E N D L + R + + Sbjct: 123 ---------------------RQSMGELNISPDSVPLNTLQGIISRAKNSFILPE----- 156 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----F 427 E R ++ A + + L+ NA+DF L+ + + + + Sbjct: 157 ------EFRRSAGDYNQQIAAKVYDLYTRKLRENNALDFDDLLIKPLELFREHPMVLEAL 210 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 ++++L+DE+QD + + L ++ +F VGDD Q+IY + GA +S F Sbjct: 211 QDTFRYLLIDEYQDTNKAQYLAAKMLSAKHR--NIFVVGDDAQSIYSWRGADISNILNFQ 268 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLD 547 +++ + L YR I + AN I+ N Q+KK L S + +TL++ Sbjct: 269 DDYTDALTFKLVENYRSTGTILQAANSVIRNNLRQIKKELVSHRSAGDP-LTLIEARNER 327 Query: 548 ALLDKLSGY--------AKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKG 599 +K+ Y + R + + LE + F ++ K Sbjct: 328 HEAEKIGEYIHSIRIEKGYEFRSFAVFYRTNA-QSRVLEDLMRQNRIPYKIFGSVSFYKR 386 Query: 600 QQA-DYV----IIVGLQEG-----SDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVA 649 ++ D V ++ ++ FP + E + + +F +AE L Y A Sbjct: 387 KEIKDAVAYLRFLLNDRDSESLLRIINFPPRK----IGETSIGKLREFAEAEGITL-YEA 441 Query: 650 LTRA 653 +TRA Sbjct: 442 ITRA 445 Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 55/159 (34%), Gaps = 24/159 (15%) Query: 532 NGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDF 591 + A +L L LL ++ L + + ++ + Sbjct: 495 KEENTAESLARHENLQELLSMARDFSDNNPDQGSLGDFLETISLASNYDESQDSDNYVSL 554 Query: 592 MTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALT 651 MT+HASKG + V I GL+E E EERRL YVA+T Sbjct: 555 MTVHASKGLEFPVVFITGLEERLFPLNCYEPE--------------QLEEERRLFYVAMT 600 Query: 652 RARHRVWALFNKEN----------PSPFVEILKNLDVPV 680 RA+ +++ + + S F+ + + V Sbjct: 601 RAQEKIFLSWAQTRYLYGQPQYCLKSMFISEIDSSIVKT 639 >UniRef50_A6VEA1 ATP-dependent DNA helicase Rep n=102 Tax=Proteobacteria RepID=A6VEA1_PSEA7 Length = 706 Score = 330 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 105/429 (24%), Positives = 170/429 (39%), Gaps = 55/429 (12%) Query: 180 AMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEA 239 + + FR S LNP Q AV LLVLAGAGSGKTSV+ + +L+ + Sbjct: 24 RIRARFDPLFRPAPMSRLNPRQQEAVNYVGGPLLVLAGAGSGKTSVITRKIAYLVQQCGI 83 Query: 240 SPEQILLLAFGRKAAEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKL 296 + I+ + F KAA EM ER+ L +T TFH L L+II++ +++ Sbjct: 84 RAQYIVAVTFTNKAAREMKERVGSLLRGGEGRGLTVSTFHNLGLNIIRKEHERLGYKPGF 143 Query: 297 ENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRL 356 + + LT+ MQ + D+ + + + Sbjct: 144 SIFDESD---------------------IKALLTDIMQKEYSGDDGVDE------IKNYI 176 Query: 357 DRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIH 416 W + + + E + + R + A + ++ L+A NAVDF LI Sbjct: 177 GAWKNDLILPE-----------EALEKARNPREQTAAIVYLHYQRTLRAYNAVDFDDLIL 225 Query: 417 QAIVILEKG-----RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQA 471 Q + + ++ ++ + +++LVDE+QD + + L+ L K +Q VGDD Q+ Sbjct: 226 QPVKLFQEHPDILQKWQNRVRYMLVDEYQDTNASQYLLVKLLVKDRAQ--FTVVGDDDQS 283 Query: 472 IYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLT 531 IY + GA+ E+F + L+ YR SRI + AN I NP +K L S Sbjct: 284 IYAWRGARPENLMQLKEDFPSLKVVMLEQNYRSTSRILKCANVLIANNPHVFEKQLWSEM 343 Query: 532 NGDKKAVTLL-------DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRW 584 + E +L +P IL R +H K Sbjct: 344 GHGDPIRVIRCRNEDAEAERIAMEILTLHLRTERPYSEFAILYRGNHQAKLMELKLQHHQ 403 Query: 585 PKLQIDFMT 593 ++ T Sbjct: 404 IPYRLSGGT 412 Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 37/162 (22%), Positives = 59/162 (36%), Gaps = 27/162 (16%) Query: 526 PLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEER--ILILARYHHM--RPASLEKAA 581 N V S + L++ L + +E + I + R + Sbjct: 523 ENWLRQNASSDKVAEFRMSNVWFLIEALKNTLERDEEGDMTIEQAIAKLVLRDMLERQQE 582 Query: 582 TRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAE 641 + MT+HASKG + YV I+G++E ++ +E E Sbjct: 583 EEEGAEGVQMMTLHASKGLEFPYVFIMGMEEEILPHRSSIEADTVE-------------E 629 Query: 642 ERRLMYVALTRARHRVWALFNKEN----------PSPFVEIL 673 ERRL YV +TRAR + F + PS F++ L Sbjct: 630 ERRLAYVGITRARQNLAMTFAAKRKQYGEIIDCSPSRFLDEL 671 >UniRef50_C6NTI8 ATP-dependent DNA helicase UvrD/PcrA n=2 Tax=Gammaproteobacteria RepID=C6NTI8_9GAMM Length = 729 Score = 330 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 94/406 (23%), Positives = 165/406 (40%), Gaps = 53/406 (13%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN Q AV+ LVLAGAGSGKT VL++R LL G P +IL + F KAA Sbjct: 20 QLNDQQREAVLLPPGPALVLAGAGSGKTRVLISRIAHLLEEG-VRPAEILAVTFTNKAAR 78 Query: 256 EMDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 M ER+ + + + TFH +A ++++ ++ + + + + + + + Sbjct: 79 SMRERLAALVQVDLAPLWMGTFHGIAHRLLRRHAEALGLPADFQVLDSDDSQRLVR---- 134 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 + R+ +E QW R LA+++ RW Sbjct: 135 ---------RALRELGLDEKQW------------TPRALAAQIGRWKDE----------- 162 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG----RFIS 429 P ++ R + + + ++ + VDF+ L+ A+ + ++ + Sbjct: 163 -GWTPAQVPAREVGRWTIPVQVYERYERIKERGGLVDFADLLLYALRLWDQDGILEHYRE 221 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 ++H+LVDEFQD + + L L LF VGDD Q+IY + GA++ F E+ Sbjct: 222 RFQHVLVDEFQDTNAVQYTWLRRLAAHGR---LFVVGDDDQSIYAWRGARVENLLRFAED 278 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL---DESQL 546 F L+ YR ++ I AN I N +L K L + +G + +E + Sbjct: 279 FPGAALVRLEQNYRSSAPILAAANAVIAHNAERLGKTLWTAQDGGEPLELYAAYNEEDEA 338 Query: 547 DALLDKLSGY---AKPEERILILARYHHMRPASLEKAATRWPKLQI 589 ++ ++ + E IL R + E ++ Sbjct: 339 RFVVAQIQQWVAQGGRREDCAILYRSNAQSRVFEEILVREGVPYRV 384 Score = 82.4 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 22/104 (21%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + M++H++KG + V +VGL+EG + ++ AEERRL YV Sbjct: 560 VQLMSLHSAKGLEFPVVFLVGLEEGLFPHQRSLEDADGL------------AEERRLCYV 607 Query: 649 ALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVAR 682 +TRA R+ + + PS F+ L + V R Sbjct: 608 GMTRAMRRLVLCYAESRRLHGSERASLPSRFLRDLPSDLVRELR 651 >UniRef50_Q6MI36 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MI36_BDEBA Length = 762 Score = 328 bits (842), Expect = 3e-88, Method: Composition-based stats. Identities = 87/413 (21%), Positives = 168/413 (40%), Gaps = 55/413 (13%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 + LNPAQ AV E LL+LAGAGSGKT VL R ++ +G A+ ++IL + F KA Sbjct: 8 TKNLNPAQKDAVETLEGPLLILAGAGSGKTRVLTHRMANMIGQGVAASDEILCVTFTNKA 67 Query: 254 AEEMDERIRERLHT------EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 A+EM+ RI + L + TFH+ + +++Q + ++ Sbjct: 68 AKEMEHRIYKILSDMGAVVQTQLWISTFHSFCVRVLRQHITLLDYKPFFGIYDSSDQ--- 124 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 +++ + + D + SR+ Sbjct: 125 ----------------------LSQIKKVMTALDINDKMYPAKNFQSRIS---------- 152 Query: 368 GAQAEMIASAPEEIRDLFSKRI-KLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR 426 A+M+ +PE + + + + + KA++ +K N++DF L+ + + Sbjct: 153 --SAKMMGLSPEGLEKSSKRLMDQKTVEVYKAYEREMKKANSLDFDDLLLKTYDLFRMYP 210 Query: 427 -----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMS 481 + +++I+VDE+QD + + L+ L + L VGD+ Q+IY + GA + Sbjct: 211 DVLQMYQKKFRYIMVDEYQDTNHIQYLLVQMLASAHR--NLCVVGDEDQSIYSWRGADIK 268 Query: 482 LTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL 541 F ++F + + L+ YR ++ I A I+ N + K L + + L+ Sbjct: 269 NILDFEKDFRDAKVIKLEENYRSSANIVNGATAVIKNNSQRKDKTLFTSNDPGD----LI 324 Query: 542 DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTI 594 + ++ AK + ++ + A + + L+ T+ Sbjct: 325 HVREEKNEYEEGRFVAKTIQSMMNEGEGSYNDYAIFYRTNAQSRVLEEQLRTM 377 Score = 94.8 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 524 KKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATR 583 + + D+ + L+ L + ++ + + L + + + Sbjct: 494 RTEYLAALKKDESPESQARIENLEELDNAIAQFVQERGEESTLISFLEEMALVNDVDSLD 553 Query: 584 WPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEER 643 + + MT+H SKG + YV +VGL+E FP+A + EER Sbjct: 554 QEQNSVTMMTLHISKGLEYPYVFVVGLEENL--FPSARSAES--------DNEQDVEEER 603 Query: 644 RLMYVALTRARHRVWALFNKEN----------PSPFVEIL 673 RL YV +TRAR ++W + K PS F++ + Sbjct: 604 RLAYVGMTRARQKLWLTYAKMRRVWGQEQFNPPSRFIKEI 643 >UniRef50_B3QF13 UvrD/REP helicase n=9 Tax=Rhizobiales RepID=B3QF13_RHOPT Length = 848 Score = 328 bits (842), Expect = 3e-88, Method: Composition-based stats. Identities = 98/438 (22%), Positives = 156/438 (35%), Gaps = 96/438 (21%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 S LNP Q AV + +LVLAGAG+GKT VL R +L+ G A P +IL + F KAA Sbjct: 36 SGLNPEQREAVETLDGPVLVLAGAGTGKTRVLTTRIAHILSTGRARPAEILSVTFTNKAA 95 Query: 255 EEMDERIRERLHTE---DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 EM R+ + L TFH++ I++ ++ V + S + Sbjct: 96 REMKLRLGQMLGQAVEGMPWLGTFHSIGGRILRYHAELVQLTSNFTVLDTDDQIRLL--- 152 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 + + N D R LA +D W + G + Sbjct: 153 ----------------------KQLLAADNIDDKRWPARMLAGLIDGWKN----RGLTPS 186 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR----- 426 ++ A + + L ++ LK NA DF L+ + I + + Sbjct: 187 QVPAGEAAMFGNGRGGK------LYAQYQERLKILNAADFGDLLLENIRLFREHPDVLRS 240 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRK------------------------------- 455 + + +K ILVDE+QD + + L L + Sbjct: 241 YQNRFKFILVDEYQDTNVAQYMWLRLLSQTPSSSSLPGSTRQSISSQEDGSPGLAASRRP 300 Query: 456 --------------QNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTT 501 + VGDD Q+IY + GA++ F +F + L+ Sbjct: 301 GDDVETSGNVVASTSAPPKNICCVGDDDQSIYGWRGAEVDNILRFDHDFPGAKVIRLERN 360 Query: 502 YRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL-------DESQLDALLDKLS 554 YR I A+ I N G+L K L + + D + VT+ + + +++L Sbjct: 361 YRSTGHILAAASHLIAHNEGRLGKTLRT-EDVDGEMVTVTGAWDSEEEARAIGEEIEQLQ 419 Query: 555 GYAKPEERILILARYHHM 572 I IL R Sbjct: 420 RQGHALNEIAILVRASFQ 437 Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 20/99 (20%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 + + MT+H++KG + + V + G +EG FP L EERR Sbjct: 618 DEDAVSVMTLHSAKGLEFETVFLPGWEEGL--FPHQRA--------LDEQGRAGLEEERR 667 Query: 645 LMYVALTRARHRVWALFNKEN----------PSPFVEIL 673 L +V +TRAR R F PS F++ L Sbjct: 668 LAHVGITRARKRAKLYFATNRRIHGTWNTTIPSRFLDEL 706 >UniRef50_A1WZS5 ATP-dependent DNA helicase UvrD n=3 Tax=Gammaproteobacteria RepID=A1WZS5_HALHL Length = 725 Score = 328 bits (842), Expect = 3e-88, Method: Composition-based stats. Identities = 100/395 (25%), Positives = 162/395 (41%), Gaps = 55/395 (13%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 ++ LN AQ AV LVLAGAGSGKT VL RA +L+ ASP IL + F KA Sbjct: 7 TADLNDAQREAVCLPPGRALVLAGAGSGKTRVLTRRAAYLVQVEGASPFAILAVTFTNKA 66 Query: 254 AEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 A EM RI E L T + TFH +A +++Q +++ + + A + Sbjct: 67 AGEMRGRIGELLGIATAGMWVGTFHGIAHRLLRQHAQRAGLPEGFQILDADDQLRVV--- 123 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 +++ R + R+ + Sbjct: 124 ----------------------------------KRVLRARGNDESRFPPRQVRGFISAR 149 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GR 426 + P ++ + + + + ++ A + VDFS L+ +A +L G Sbjct: 150 KEEGERPSDVTEAGGDYQQELLAVYHDYEQACRRGGLVDFSELLLRAYELLRDDPELLGH 209 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + + HILVDEFQD + + L L + S+ LF VGDD Q+IY + GA++ F Sbjct: 210 YQRRFAHILVDEFQDTNALQYRWLKLLGGEQSE--LFVVGDDDQSIYGWRGARVENIEHF 267 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL----D 542 G+ L+ YR I + ANR I+ N G+L K L + + +TL + Sbjct: 268 RREMGDVRVVRLEQNYRSTGTILDAANRLIEHNSGRLGKQLWT-DGWSGEPITLYAAFNE 326 Query: 543 ESQLDALLDKLSGYAKPEE----RILILARYHHMR 573 + ++D++ ++ IL R + Sbjct: 327 VDEARWVVDRIRQLSEEGGYGHADFAILYRSNAQS 361 Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 22/96 (22%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 + MT+H++KG + V +VG++EG FP + E EERRL Y Sbjct: 550 SVQLMTLHSAKGLEFPVVFLVGMEEGL--FPHR----------MSVEEPGRLEEERRLCY 597 Query: 648 VALTRARHRVWALFNKE----------NPSPFVEIL 673 V +TRAR R+ ++ PS F+ + Sbjct: 598 VGMTRARQRLILTHAEKRRLHGMDQLARPSRFLTEI 633 >UniRef50_UPI0001C37867 ATP-dependent DNA helicase PcrA n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37867 Length = 786 Score = 328 bits (841), Expect = 4e-88, Method: Composition-based stats. Identities = 95/455 (20%), Positives = 163/455 (35%), Gaps = 95/455 (20%) Query: 173 HNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGW 232 + ++ A +F ++ N Q AV +LVLAGAGSGKT+V+V R Sbjct: 2 ASNSFVSAKQEALKKYFSRM-----NDMQQEAVFTVNGPVLVLAGAGSGKTTVIVNRIAN 56 Query: 233 LLARGE---------------------------------------ASPEQILLLAFGRKA 253 ++ G P IL + F KA Sbjct: 57 MIKFGNAFYDETRSGSEEDIAFLKDYAAGKTDDADTLRDIVAADPIKPWNILAITFTNKA 116 Query: 254 AEEMDERIRERLHTED---ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 A E+ ER+ L E+ I A TFH+ + I++ + S + + I Sbjct: 117 AGELKERLAAMLGEEEAVKINASTFHSACVRILRSEITALGYGSDFTIYDSDDSQRMIKS 176 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 + ++ + +++ A+ Sbjct: 177 VMAELD-----------------------------------ISEKQLAPKAVLGEISRAK 201 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----G 425 +MI R K++A + ++ ++ NA+DF ++ + + E+ Sbjct: 202 DQMITPEQLRADAGQDYRKKMVAKIYARYQEGMRTANALDFDDILTLTVELFEQFPEVLE 261 Query: 426 RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 ++ + +K+I+VDE+QD + + L++ L +S L VGDD Q+IY+F GA + Sbjct: 262 KYRTRYKYIMVDEYQDTNHVQFRLVSLLS--DSHKNLCVVGDDDQSIYKFRGANIENILG 319 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDK-----KAVTL 540 F + F + L+ YR I AN I N G+ K L + KAV Sbjct: 320 FEDQFAGAKVIRLEQNYRSTQTILNAANSVIGNNVGRKAKTLWTAGEQGDKVYWYKAVDE 379 Query: 541 LDESQLDA-LLDKLSGYAKPEERILILARYHHMRP 574 DE+ A + K +L R + Sbjct: 380 TDEANFVAETIKKYHKETGRYADNAVLYRMNAQSN 414 Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 22/118 (18%) Query: 566 LARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESI 625 L + E ++ MT+H++KG + D + +VGL +G FP++ Sbjct: 578 LGGFLEEVALYTEADRDPETDDKVTLMTVHSAKGLEYDNIFVVGLDDGI--FPSSRSFDS 635 Query: 626 MEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEIL 673 ++ EERRL YVA+TRA+ ++ + S F+ + Sbjct: 636 EDDM----------EEERRLAYVAITRAKKHLYLTNASQRMLFGQTQRNVTSRFMREI 683 >UniRef50_D1NAY9 UvrD/REP helicase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NAY9_9BACT Length = 679 Score = 327 bits (839), Expect = 7e-88, Method: Composition-based stats. Identities = 93/425 (21%), Positives = 170/425 (40%), Gaps = 62/425 (14%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 LNP QA A +LVLAGAG+GKT V+ R ++LA G P+ IL + F KAA Sbjct: 8 KQLNPEQASAAGTVNGPVLVLAGAGTGKTRVITFRIAYMLACG-IPPQMILGMTFTNKAA 66 Query: 255 EEMDERIRERLHT---EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 EM ER+ + + +T TFH+ + I+++ K+ + + + + + Sbjct: 67 REMRERLAQLVQPQIARKVTLGTFHSFCIKILRRDIAKLGYLPSFTIADESDQQGVLKQA 126 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 Q + + E+Q S + RW + + A+ Sbjct: 127 AGQLGC------NYEGFPLGEVQ-------------------SMIGRWKNKLFFPEDAR- 160 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----R 426 R + A L + ++ L+ +N++DF ++ + + R Sbjct: 161 ----------RHADTTFEATAAQLYEEYQTLLEMQNSLDFDDMLLLVYRLFTEHPDVLER 210 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + ++++L+DE+QD + + ++ L + L VGDD Q+IY + GA +S F Sbjct: 211 YRETYQYLLIDEYQDTNAAQFTIVKLLT--GDRCNLCVVGDDDQSIYSWRGADISNILGF 268 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDES-- 544 ++F + L+ YR + I AN I N + +K L S + + E+ Sbjct: 269 PDHFPGAKVVKLEQNYRSTTSILNAANVVIGSNANRHEKQLWSNLGDGEPVKIVTTENGE 328 Query: 545 ----QLDALLDKLSGYA--KPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASK 598 + +++ ++ + IL R +H LE+ R + Sbjct: 329 SEAEFIGSMITQMKNDKPELRYQDFAILYRSNH-LSRQLEQTLRRQQ------IPYRLVG 381 Query: 599 GQQAD 603 GQ+ Sbjct: 382 GQEFF 386 Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 23/97 (23%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + MT+HASKG + V +V ++ A E +E EE RL YV Sbjct: 561 VTLMTVHASKGLEFPVVFVVAMERNIFPHERALEEGSVE-------------EELRLFYV 607 Query: 649 ALTRARHRVWALFNKEN----------PSPFVEILKN 675 A+TRAR ++ L KE PSPF+ +L + Sbjct: 608 AITRARKYLYLLRAKERMQRGITRATLPSPFLHLLTD 644 >UniRef50_D0LIZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LIZ3_HALO1 Length = 688 Score = 327 bits (837), Expect = 1e-87, Method: Composition-based stats. Identities = 94/397 (23%), Positives = 156/397 (39%), Gaps = 56/397 (14%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 + ++ + LN Q AV++G +LVLAGAGSGKT V+ R LL G P+ I L F Sbjct: 2 QNMDLAKLNTPQREAVLHGSGPVLVLAGAGSGKTRVITYRIVRLLRSG-IPPQAIAALTF 60 Query: 250 GRKAAEEMDERIRERLHTED----ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHE 305 +AAEEM ER+ L +T TFH+L L I++ + + + Sbjct: 61 TNRAAEEMRERVAALLGDRKTASMLTMGTFHSLGLRILRSEHEAMGYPRGFVIYDTSDQL 120 Query: 306 LFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRM 365 + E + + G +D + R +SL + Sbjct: 121 GVVRELLR----------------------GIDAGRRFDVRAILTR--------ISLAKN 150 Query: 366 HGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-- 423 E + + +E ++ A + ++ AL+A AVDF L+ + + + Sbjct: 151 AFVFPEEYVPNGDDEYD-------EITAEVYPRYQEALRAYAAVDFDDLLTATVRMFDQR 203 Query: 424 ---KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQM 480 + R+ ++ ++VDE+QD + + + L ++ L VGDD Q+IY + GA Sbjct: 204 DDVRARWQEKFRFVMVDEYQDTNRAQLKFVKTLVAEHE--NLCVVGDDDQSIYSWRGADP 261 Query: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL 540 + F F L+ YR I AN I N + K L S K V Sbjct: 262 TNILHFDRMFPGARVIKLEQNYRSTPTILRAANAVIANNVNRHGKNLWSDIADGAKIVHA 321 Query: 541 L---DESQLDALLDKLSGY----AKPEERILILARYH 570 ES+ + ++ + +L R + Sbjct: 322 SATDTESEARFVAREIGDIVGTDNLRYRDVAVLYRSN 358 Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 72/178 (40%), Gaps = 16/178 (8%) Query: 506 SRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILI 565 +RI +V R I +++ + A +++LL L + + + Sbjct: 480 ARIIDVTRRLI----DEIQLYDDLRNASPSAAAAQRRIDNVESLLRSLERHQEKRPGLGA 535 Query: 566 LARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESI 625 LA Y ++E A P ++ T+H +KG + V ++GL+E P A Sbjct: 536 LAEYLRRLSLAVESEAGEDPGNKVVLTTLHGAKGLEFPIVFMIGLEEEI--LPHARTLKP 593 Query: 626 MEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEIL 673 ++ +EERRL YV +TRA+ +++ + PS F++ + Sbjct: 594 QATDVMDLDHVTDVSEERRLAYVGITRAQRKLYLTRTQVRVSRGKNLPRTPSRFLQEI 651 >UniRef50_C5VHV2 ATP-dependent DNA helicase PcrA n=20 Tax=Bacteroidales RepID=C5VHV2_9BACT Length = 851 Score = 327 bits (837), Expect = 1e-87, Method: Composition-based stats. Identities = 93/415 (22%), Positives = 170/415 (40%), Gaps = 48/415 (11%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 + S LN +Q AV LV+AGAGSGKT VL + +LL +G P IL L F Sbjct: 7 EEAILSALNESQREAVEYCTGPSLVIAGAGSGKTRVLTYKIAYLLNKG-LKPWNILALTF 65 Query: 250 GRKAAEEMDERIRERLHTED---ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHEL 306 KAA EM ERI + +D + TFH++ I+++ + + S Sbjct: 66 TNKAAREMKERIAQITTAKDAQHLYMGTFHSIFARILRREGEAIGFGSNFTIYDENDSRS 125 Query: 307 FIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMH 366 I K + K + + ++S+ + H Sbjct: 126 LIKSIVKALDLDEKTYK-----------------------------PASVHNFISMAKNH 156 Query: 367 GGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE--- 423 +E RD S R+ + + KA++ + NA+DF ++ ++ Sbjct: 157 LITASEYAEDRAAIERDR-SARMPAIHMIYKAYEARCRQANAMDFDDILLYTFLLFRDNK 215 Query: 424 --KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMS 481 + ++ +++ILVDE+QD + + ++++ L + + + + VGDD+Q+IY F GA + Sbjct: 216 EIREKYGQQFEYILVDEYQDTNYAQVSIISQLAETHRR--ICVVGDDYQSIYSFRGANID 273 Query: 482 LTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVT-- 539 F F + + L+ YR I + AN ++ N Q+ K + S K + Sbjct: 274 NILDFKHKFDDAKLFKLERNYRSTQLIVQAANSLMKHNERQIPKDVFSKEAEGDKILYKP 333 Query: 540 -LLDESQLDALLDKLSGYAKPEE----RILILARYHHMRPASLEKAATRWPKLQI 589 D + + ++L + ++ IL R + + ++ + +I Sbjct: 334 CYSDREEAMVVANELKRIKRNDDCDYGNFAILYRTNAQSRSFEDEFRKQGIPYKI 388 Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 48/128 (37%), Gaps = 22/128 (17%) Query: 554 SGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEG 613 SG + E + L Y + ++ MTIHA+KG + V +VGL+E Sbjct: 535 SGREEGREENVYLTDYLQEVALYTDADKEDDDTPKVTLMTIHAAKGLEFPTVFVVGLEEN 594 Query: 614 SDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNK---------- 663 P + EERRL+YVA+TRA K Sbjct: 595 IFPSP------------MSASSKREIEEERRLLYVAITRAERHCILTNAKNRFRYGSMQV 642 Query: 664 ENPSPFVE 671 +NPS F+ Sbjct: 643 DNPSRFLN 650 >UniRef50_Q0AHY9 ATP-dependent DNA helicase UvrD n=16 Tax=Betaproteobacteria RepID=Q0AHY9_NITEC Length = 748 Score = 327 bits (837), Expect = 1e-87, Method: Composition-based stats. Identities = 97/394 (24%), Positives = 156/394 (39%), Gaps = 53/394 (13%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + LNP Q AV S L+LAGAGSGKT VL R +LL G P+ +L + F KAA Sbjct: 6 TDLNPEQLEAVTWPHQSALILAGAGSGKTRVLTTRIAYLLQSGLTQPQNLLAVTFTNKAA 65 Query: 255 EEMDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM RI L + + TFH L +++ + + + A I Sbjct: 66 REMVARISTMLPINIRGMWIGTFHGLCHRMLRAHYEDAGLPQAFQILDMADQLAVIKRIL 125 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 K+ S ++ LA R +W A+ E Sbjct: 126 KERSLD------------------------------EKVLAPRQLQW-----FINNAKEE 150 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RF 427 + ++ + R F++ + A + ++ VDF+ L+ + +L + + Sbjct: 151 GLRASQVDTRGSFNRTL---AECYQVYEAVSMRGGTVDFAELLLRCYELLSRNEILRDHY 207 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNS--QTTLFAVGDDWQAIYRFSGAQMSLTTA 485 ++HILVDEFQD + + + L S +FAVGDD Q+IY F GA + Sbjct: 208 RGRFEHILVDEFQDTNRLQYQWIKLLAGSGSQQHAAIFAVGDDDQSIYAFRGAHVGNMRD 267 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL---D 542 ++F + L+ YR I + AN I+ N G+L K L + + D Sbjct: 268 LEKDFSVPKIIRLEQNYRSQGNILDAANALIENNKGRLGKNLWTAAGKGESVRIYYAATD 327 Query: 543 ESQLDALLDKLSGYAKPE---ERILILARYHHMR 573 + ++D++ I +L R + Sbjct: 328 VDETSFIVDEIKALHAEGLSLSEIALLYRSNAQS 361 Score = 96.7 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 33/109 (30%), Positives = 48/109 (44%), Gaps = 22/109 (20%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 + + MT+HA+KG + V I GL+EG + E E EERR Sbjct: 551 YQDAVQLMTVHAAKGLEFHSVFISGLEEGLFPHENSRNEPNGLE------------EERR 598 Query: 645 LMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVARK 683 LMYVA+TRAR R++ + + PS FV+ + + R Sbjct: 599 LMYVAMTRARQRLYLSYAESRMLHGQVRVNVPSRFVDEIPEELLKRLRS 647 >UniRef50_D2R6Z4 UvrD/REP helicase n=4 Tax=Planctomycetaceae RepID=D2R6Z4_9PLAN Length = 669 Score = 326 bits (836), Expect = 1e-87, Method: Composition-based stats. Identities = 96/394 (24%), Positives = 157/394 (39%), Gaps = 54/394 (13%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 S LNP Q AV LLVLAGAGSGKT V+ R L+ G P++IL + F KA Sbjct: 2 SHGLNPEQQEAVDTLRGPLLVLAGAGSGKTRVVTFRMANLIKHG-TQPDRILAVTFTNKA 60 Query: 254 AEEMDERIRERLHTE---DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 A EM R+ L T+ TFH+ + ++++ ++ + K E Sbjct: 61 AAEMQHRLSALLKTKSKIKPQVSTFHSHCVRLLRRHARVLGYPEKFAIYDRGDQESLARG 120 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 + + L +++ W +L + Sbjct: 121 VLRDIRVPSDLMR-------------------------PGDLVTQIGSWKTL--GIRPQE 153 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KG 425 AE +AS +E L A K ++ AL+ AVDF L+ + + + Sbjct: 154 AERLASTDKE---------HLAASGYKKYQKALRHAGAVDFDDLLMLTEELFKIAPQVRQ 204 Query: 426 RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 + + H+LVDE+QD + + ++ AL ++ + VGDD Q+IY + GA++ Sbjct: 205 QEARQFDHLLVDEYQDTNGLQYRIIRALADEHR--NICVVGDDDQSIYGWRGAEVKHILQ 262 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKA----VTLL 541 F ++ + + L+ YR S I E AN+ I N + K L + G ++ Sbjct: 263 FKNDWPDAKVVRLEWNYRSTSAILETANKLIAYNKHRHDKVLKAARAGGERPRIEQYPSE 322 Query: 542 DESQLDALLD---KLSGYAKPEERILILARYHHM 572 E + D +L + IL R + Sbjct: 323 VEEARQVVADIAFRLKDGTRDPRDFAILFRTNEQ 356 Score = 82.0 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 79/216 (36%), Gaps = 30/216 (13%) Query: 478 AQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKA 537 A + + + + E + E+ + I + G ++ + +++ Sbjct: 463 AAIRSFSNLIQRYSEATA--------RGDSLAELTRKLISE-TGYEQEVRRIYPDPEEQQ 513 Query: 538 VTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHAS 597 + L ++ + + L + + + + + I MT+HAS Sbjct: 514 MRLAAVEEVVNSVAAYEAEEEKPSISGYLDQVTLGQREMGDDKEKQLARNAIALMTLHAS 573 Query: 598 KGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRV 657 KG + +V ++GL++G + + ++ EERRL YV +TRA+ R+ Sbjct: 574 KGLEFPHVYMIGLEDGILPHSRSVKADSQDQI----------DEERRLCYVGITRAQERL 623 Query: 658 WALFNKEN----------PSPFV-EILKNLDVPVAR 682 PS F+ EI+ D P +R Sbjct: 624 TLSLALTRMKWGKPRDTTPSRFLFEIIGQADNPHSR 659 >UniRef50_B5YF03 ATP-dependent DNA helicase PcrA n=2 Tax=Dictyoglomus RepID=B5YF03_DICT6 Length = 625 Score = 326 bits (835), Expect = 2e-87, Method: Composition-based stats. Identities = 96/410 (23%), Positives = 161/410 (39%), Gaps = 55/410 (13%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 LN Q AV+ E +L+LAGAGSGKT V+ + +L+ A PE I+ L F KAA Sbjct: 5 KELNKEQLEAVLEIERPVLILAGAGSGKTRVITYKIAYLIKNNIAKPENIVALTFTNKAA 64 Query: 255 EEMDERIRERLHTED---ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 EEM +RI L +D + A TFH L++++ K + E I + Sbjct: 65 EEMKKRINNMLGAKDADKVWAGTFHGFGLYLLKNFGKYWSLSPYFVIYDENDQEDLIKDI 124 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 K + K + R + ++ R + Sbjct: 125 LKDLNRAK--------------------------DYNARDIKEKISRLKDQL-------- 150 Query: 372 EMIASAPEEIRDLFSKRI-KLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR---- 426 P+E L S +++ + K ++ L+ NA+DF+ L+ +I +L++ Sbjct: 151 ----ITPQEFSSLISNSFDEIVLEVYKRYEKELRRNNALDFADLLLYSIRLLQEKPAICG 206 Query: 427 -FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 +++LVDE+QD + + L + + + VGDD Q+IY F GA Sbjct: 207 FLQDKIEYVLVDEYQDTNKAQYELFKIIVLDKQKFS--VVGDDDQSIYSFRGADYQNIFR 264 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAV---TLLD 542 ++F L YR +I E+AN I N + K L S V L + Sbjct: 265 LEKDFKNLRVIFLTKNYRSTQQILEIANVLIANNDKRYPKELWSDKKDGTYPVLFRALNE 324 Query: 543 ESQLDALLDKLS---GYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 E + + + ++ + I +L R + + E ++ Sbjct: 325 EDEANFVARQIKLEVAKGRRWSEIAVLYRTNRQSRSFEEALIRNNIPYKV 374 Score = 88.2 bits (217), Expect = 9e-16, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 19/114 (16%) Query: 566 LARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESI 625 L + + K + + ++ +T+H+ KG + + V +VG++EG A + Sbjct: 517 LGEFLTHLSLTNSKLESTLEEGKVSLITLHSVKGLEFEVVFLVGMEEGILPHYNATTKE- 575 Query: 626 MEEALLPPVEDFPDAEERRLMYVALTRARHRVWALF------NKENPSPFVEIL 673 EERRL YV +TRA+ +++ + + PS F+E + Sbjct: 576 ------------EIQEERRLCYVGITRAKEKLYLSYAAKRYSRYQEPSRFLEEI 617 >UniRef50_Q31JE9 ATP-dependent DNA helicase UvrD n=3 Tax=Gammaproteobacteria RepID=Q31JE9_THICR Length = 741 Score = 326 bits (835), Expect = 2e-87, Method: Composition-based stats. Identities = 98/395 (24%), Positives = 154/395 (38%), Gaps = 52/395 (13%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + LN AQ AV + L+LAGAGSGKT VLV R WL S IL + F KAA Sbjct: 8 NDLNDAQRDAVTVEDQHALILAGAGSGKTRVLVHRIAWLTQVMGFSAYNILAVTFTNKAA 67 Query: 255 EEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM R+ + ++ +T TFH +A +++ K+V + + + + I Sbjct: 68 SEMRARVEALIGNQSQGMTMGTFHGIAYRLLRTHYKEVGLPQSFQILDSDDQKRVIKRLL 127 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 K AQ W + Sbjct: 128 KALELDDAQ-------------------------------------WPHKQVQAFINGEK 150 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RF 427 P I + ++ M + +A++ K VDF+ L+ +A + K + Sbjct: 151 EEGRRPHHIDPGHNPYVRQMVQIYQAYEEQCKRAGLVDFAELLLRAHELWLKNPQVLAHY 210 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + ++HILVDEFQD + + A L L + + LF VGDD Q+IY + GA++ F Sbjct: 211 QARFRHILVDEFQDTNSLQYAWLRVLAGASGR--LFIVGDDDQSIYGWRGAKIENIRRFD 268 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKK-----AVTLLD 542 E+F + + L+ YR I + AN I N ++ K L S A LD Sbjct: 269 EDFSDVKTVRLEQNYRSTGTILKAANGLIAFNQDRMGKNLWSAGEEGDPIRIYEAFNELD 328 Query: 543 ES-QLDALLDKLSGYAKPEERILILARYHHMRPAS 576 E+ + ++ + +L R + Sbjct: 329 EARYVCNQVESWCEQGGSRSEVAVLYRSNAQSRVM 363 Score = 88.6 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 23/116 (19%) Query: 578 EKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDF 637 E+ A +W + MT+HA+KG + V ++GL+EG FP+ + + Sbjct: 563 EQQADQWES-SVQLMTLHAAKGLEFPLVFMIGLEEGL--FPSQ----------QSQEDPY 609 Query: 638 PDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVARK 683 EERRL YV +TRA ++ F PS F++ + + V + R Sbjct: 610 RLEEERRLAYVGITRAEKQLMISFANRRRMHGSEFYPLPSRFIKEIPDDCVQMVRL 665 >UniRef50_Q4FPM1 DNA helicase II n=5 Tax=Bacteria RepID=Q4FPM1_PELUB Length = 678 Score = 325 bits (833), Expect = 3e-87, Method: Composition-based stats. Identities = 102/388 (26%), Positives = 169/388 (43%), Gaps = 52/388 (13%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + LN AQ AV+ + LL++AGAGSGKT VL +R ++ +A P QIL + F KAA Sbjct: 8 NNLNNAQKEAVLYLDGPLLIVAGAGSGKTKVLTSRIAHIINEKKAFPNQILSVTFTNKAA 67 Query: 255 EEMDERIRERLHTEDI---TARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 +EM R+ L++E I TFH++ ++++ + + S I Sbjct: 68 KEMQNRVSSILNSEAIGLSWLGTFHSICAKLLRKHAPAAGLTSNFTIIDTDDQVRLIKNI 127 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 K N + + + S +DRW + G Sbjct: 128 CK-------------------------AENIDIKQLAPKFILSIIDRWKN----KGFHPD 158 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR----- 426 E++ + D+F + I+ PL K ++ L NA DF LI + ILEK Sbjct: 159 EVVINKN----DIFERTIR---PLYKIYQQKLLDLNACDFGDLILHVVKILEKNHDIRNI 211 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + + +K+ILVDE+QD + ++ L L +++ L VGDD Q+IY + GA++ F Sbjct: 212 YSNNFKYILVDEYQDTNYIQSRWLNLLSEKHK--NLCCVGDDDQSIYSWRGAEIKNFLEF 269 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKP-LNSLTNGDKKAVTLLDESQ 545 + + + L+ YR + I VA+ I N ++ K ++ GD + + Sbjct: 270 DQVYKNSKVIRLEENYRSSQNILSVASNLIANNQNRVGKTLKTTMEEGDLVKLNCFKNGK 329 Query: 546 LDAL-----LDKLSGYAKPEERILILAR 568 +A+ ++K I IL R Sbjct: 330 DEAIGVSDEIEKKLKKKYSFNNIAILVR 357 Score = 89.0 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 20/105 (19%) Query: 582 TRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAE 641 W +++ MT+H SKG + D V + G +EG + E E Sbjct: 541 QDWDGEKVNMMTMHGSKGLEFDVVFLPGWEEGLFPHQKSIEEKGQNGL----------EE 590 Query: 642 ERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNL 676 ERRL YV +TRA+ + F S F+E L Sbjct: 591 ERRLAYVGITRAKKKALISFAMNRFYQGNWIDSMASRFIEELPEK 635 >UniRef50_C1ZAM6 DNA/RNA helicase, superfamily I n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZAM6_PLALI Length = 845 Score = 324 bits (831), Expect = 6e-87, Method: Composition-based stats. Identities = 90/408 (22%), Positives = 155/408 (37%), Gaps = 49/408 (12%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 L P+QA AV + E LLVLAG GSGKT V+ R L+ R P +IL + F KAA Sbjct: 7 DLTPSQAAAVEHFEGPLLVLAGPGSGKTRVVTRRIARLIERR-VHPAEILAITFTNKAAR 65 Query: 256 EMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQC 315 EM ER+ + + TFH I++Q V + + + E K+ Sbjct: 66 EMAERVEHLIPGRRVAVSTFHKFCARILRQYGGVVGLKPNFSILDVKDQDAALKEAVKEE 125 Query: 316 SEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIA 375 SR+ + ++ + Sbjct: 126 GFDPTHYS-----------------------------PSRIGWRIGQLKNECISPGMFAQ 156 Query: 376 SAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFIS-----P 430 A E + + ++A ++ L NAVDF L+ + IL++ + Sbjct: 157 QAGERV---GTHLDSVVAKAYGRYQQILLDANAVDFDDLLLHVVTILKENPNLRQSLDER 213 Query: 431 WKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENF 490 ++ ILVDE+QD + + +++AL + ++ L A GD Q+IY + GAQ+ F +F Sbjct: 214 YRFILVDEYQDTNQAQYQIVSALSQ--NEPNLCATGDPDQSIYGWRGAQIENILRFERDF 271 Query: 491 GEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD-------- 542 + L+ +R I A+ I+ N + K L + +N V + Sbjct: 272 PRVKMVRLEDNFRSTPEILAAADDLIRHNTQRKAKSLRT-SNPSGLPVEIRQYADGFQEA 330 Query: 543 ESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQID 590 +S + ++++ + I R + + + I Sbjct: 331 DSLAAEIRERVASGERQYSDFAIFYRVNSLSRSIETALGRARVPFAIT 378 Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 20/97 (20%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 Q+ MT+H++KG + V +VG++ G + RE + EERRL++ Sbjct: 551 QVQLMTLHSAKGLEFPCVYLVGVEHGLLPHERSLREG----------DPLQIEEERRLLF 600 Query: 648 VALTRARHRVWALFNKENP----------SPFVEILK 674 V +TRAR ++ + + S F+ L Sbjct: 601 VGMTRAREELYLTWTRLRSTHGRLLSTIASQFLTELN 637 >UniRef50_Q5KJH7 ATP-dependent DNA helicase pcra, putative n=2 Tax=Filobasidiella neoformans RepID=Q5KJH7_CRYNE Length = 982 Score = 324 bits (831), Expect = 7e-87, Method: Composition-based stats. Identities = 92/393 (23%), Positives = 174/393 (44%), Gaps = 42/393 (10%) Query: 195 SPLNPAQARAVVNGEH-SLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 + LN AQ +AV L +LAG GSGKT VL R +L+ + SP +I+ + F K+ Sbjct: 15 ASLNQAQLKAVTASPSVPLQILAGPGSGKTRVLTCRVAYLVQHHKYSPNEIVAVTFTNKS 74 Query: 254 AEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 A EM +R+++ L + + TFHA + +++ K + + + A + ++ Sbjct: 75 ANEMRKRLQKLLGDKQADQLVLGTFHATCVKYLRRYGKLINLSNNFVIADAEDCKKIMSG 134 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 K R+ +E S+ EG + S + + + G Sbjct: 135 ILKS-----------RKAALDEASMSLKEG----------VVLSEISKAKA-----KGEP 168 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-RFIS 429 E +A + ++ F+ + ++A L + ++ AL N++DF L+ A+ + ++ R + Sbjct: 169 PEAMAIRAAQNKNAFTNTLAVIADLYEEYQLALTEANSLDFDDLLLYALRLFKEAPRVVE 228 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 +HILVDEFQD + + LL K + + VGD Q+IY + A++ ++ Sbjct: 229 NIRHILVDEFQDTNTTQYELLKRFAKAHKGVS--VVGDPDQSIYGWRSAEIENLNKMTKD 286 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKA------VTLLDE 543 F E L+ YR I + A+ + Q+ +++K L + +++ Sbjct: 287 FPGVEAIYLEENYRSTGSILDAAHAIVSQDRQRIQKSLFTSHPKSAPVTLKVFSTPVIEA 346 Query: 544 SQLDALLDKLSGYA---KPEERILILARYHHMR 573 S + + +L Y+ + IL RY+ + Sbjct: 347 SFISTEIKRLIAYSGGLLRYDDFAILLRYNALS 379 Score = 82.0 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 13/96 (13%) Query: 570 HHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEA 629 M E ++ MT+HA+KG + V I +++G+ FP+ Sbjct: 700 TSMLSTDTESGQDDASTPKVTIMTVHAAKGLEWPVVFIPAVEQGT--FPSYRCTEP---- 753 Query: 630 LLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN 665 AEERRL+YVA+TRA+ ++ + E Sbjct: 754 -------HEIAEERRLLYVAMTRAQSFLFRMMGGEE 782 >UniRef50_P44804 ATP-dependent DNA helicase rep n=275 Tax=Proteobacteria RepID=REP_HAEIN Length = 670 Score = 323 bits (829), Expect = 9e-87, Method: Composition-based stats. Identities = 89/394 (22%), Positives = 152/394 (38%), Gaps = 55/394 (13%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNP Q +AV LVLAGAGSGKT V++ + L+ + SP+QI + F KAA Sbjct: 2 KLNPQQQQAVEYVTGPCLVLAGAGSGKTRVIINKIAHLIEKCGYSPKQIAAVTFTNKAAR 61 Query: 256 EMDERIRERLHTE---DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM ER+ + E + TFH L I+++ K + S + + E Sbjct: 62 EMKERVAHSIGKEQSKGLLVSTFHTLGFDILKREYKALGFKSNMTLFDEHDQFALLKELT 121 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 +D+ L R L S + W + Sbjct: 122 ADV--------------------------LKEDKDLLRELISVISNWKND---------- 145 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RF 427 + S + + + A + + ++ NA+DF LI ++ ++ ++ Sbjct: 146 -LISPKQAFALARDAKYQTFAKCYERYATQIRTYNALDFDDLIMLPTLLFKQNEEVRSKW 204 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + +++LVDE+QD + + L+ L + VGDD Q+IY + GA+ Sbjct: 205 QAKIRYLLVDEYQDTNTSQYELIKLLV--GDRACFTVVGDDDQSIYSWRGARPENMVRLR 262 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLD 547 ++F L+ YR RI AN I N K L S +K + + +++ Sbjct: 263 DDFPRLNVIKLEQNYRSTQRILHCANILIDNNEHVFDKKLFSTIGKGEKLLVIEAKNEEH 322 Query: 548 A--------LLDKLSGYAKPEERILILARYHHMR 573 + + S K ++ ++ H R Sbjct: 323 EAERIVAELIAHRFSRKTKYKDYAILYRGNHQSR 356 Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 41/143 (28%), Positives = 57/143 (39%), Gaps = 23/143 (16%) Query: 546 LDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYV 605 D + D L G E L LE+ Q+ MT+HASKG + YV Sbjct: 510 FDWVADMLKGDETNEPMNLNQVVTRLTLRDMLERGEDDDDSDQVQLMTLHASKGLEFPYV 569 Query: 606 IIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN 665 ++G++EG + E +E EERRL YV +TRA+ + +E Sbjct: 570 YLIGMEEGILPHQTSIDEDNVE-------------EERRLAYVGITRAQKELTFSLCRER 616 Query: 666 ----------PSPFVEILKNLDV 678 PS F+ L N DV Sbjct: 617 RQYGELVRPEPSRFLAELPNDDV 639 >UniRef50_C3WE38 UvrD/REP helicase n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WE38_FUSMR Length = 518 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 123/492 (25%), Positives = 212/492 (43%), Gaps = 77/492 (15%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 SS LN Q +A+++ E LV+AGAGSGKT +V R WL+ G S E+IL++ F RKA Sbjct: 64 SSLLNEEQKKALLSTEGQYLVIAGAGSGKTRTIVYRTAWLIENG-VSEEKILMVTFTRKA 122 Query: 254 AEEMDERIRERLHTEDI--TARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 +EEM ER++ L+ E++ TFH+ +I + + + + R ++ + Sbjct: 123 SEEMKERLKNILNVEELKTVVTTFHSFCARLIFKYKALFEVDNLNIMEEGEREKILLKIV 182 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 + KK + K F+D E+L RL Sbjct: 183 ERFELNKKYKGK------------------FYDIEELSNRL------------------- 205 Query: 372 EMIASAPEEIRDLFSK-RIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR---- 426 E + +A + D+F K I + + ++ K +N ++ L+ I ++ R Sbjct: 206 EKLQNARLRLEDIFPKEHIDDIIKIKSEYRKYKKIKNVYEYDDLVEIVIKKFKENREFLK 265 Query: 427 -FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 +I+VDE+QD + + LL L ++ L VGDD+Q+IY F GA + Sbjct: 266 IIRDKIDYIVVDEYQDSNLAQRELLKLLVGEDK--NLMVVGDDYQSIYGFRGADFTNILK 323 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKA---VTLLD 542 F E+F + + L+ YR + I NR + K + ++ + Sbjct: 324 FGEDFPKAKLIKLEKNYRSSEEIIAYTNRIANNFKIKYNKKIYGTGRRGERVHINSFKDE 383 Query: 543 ESQLDALLDKLSGYAK--PEERILILARYHH----MRPASLEKAATRWPKLQID-----F 591 E + + +K+ Y + P E ++IL R + M +E + K + Sbjct: 384 EKEGRYICEKILAYKEKFPFEEMVILFRNKYTVKVMEKLLMEYKIPYYKKEMEEKRGVAL 443 Query: 592 MTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALT 651 ++H+SKG + + V I L +G FP++ + +E EE+RL YV + Sbjct: 444 YSLHSSKGLEWEIVFIPTLLDGV--FPSSIEKENLE-------------EEKRLYYVGCS 488 Query: 652 RARHRVWALFNK 663 RA+ + + K Sbjct: 489 RAKSFLHLSYPK 500 >UniRef50_D2RIV6 ATP-dependent DNA helicase PcrA n=6 Tax=Veillonellaceae RepID=D2RIV6_ACIFE Length = 750 Score = 323 bits (828), Expect = 1e-86, Method: Composition-based stats. Identities = 87/400 (21%), Positives = 154/400 (38%), Gaps = 53/400 (13%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + LN QA AV +L+LAGAGSGKT L + +LL +G P IL + F KAA Sbjct: 6 ASLNEQQAEAVRQIAGPILILAGAGSGKTKALTTKIAYLLEKG-VKPWNILAITFTNKAA 64 Query: 255 EEMDERIRERLHT--EDITARTFHALALHIIQQGSKKVP-IVSKLENDTAARHELFIAEW 311 +EM +R+ + +D+ TFH ++++ +P + + + + E Sbjct: 65 KEMRQRVDALVGPSAKDVWLYTFHGFCNQLLRRDINALPGYTTSFSIYDPSDCKNVLKEA 124 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 K+ + + F+ L +++ + V Sbjct: 125 LKKLNLDE---------------------KFYPLPGLLATISNAKNAQVD---------- 153 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGR 426 A R K +A + ++ L NAVDF L+ + +L+ + + Sbjct: 154 -----AAAFARQAEDYHAKKVAEIYAEYQKHLVQSNAVDFDDLLLLTVKLLQTVPEVREK 208 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + + + ++L+DE+QD + + L L + L AVGD Q+IY + GA +S F Sbjct: 209 YQNKFHYVLIDEYQDTNHVQYLLAKLLSA--PENNLCAVGDIDQSIYGWRGADISNILDF 266 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQL 546 +++ + L+ YR I + AN I+ N + K L + + Sbjct: 267 EKDYPQARIFKLEQNYRSTQVILDAANEVIKHNAARRPKNLWTENGNGQPIAYYQARDDR 326 Query: 547 DAL------LDKLSGYAKPEERILILARYHHMRPASLEKA 580 + + KL + IL R + E Sbjct: 327 EEAEFVVGQIRKLQREGTKLGDMAILYRTNAQSRMFEENL 366 Score = 82.0 bits (201), Expect = 6e-14, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 22/99 (22%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 + + MT+H++KG + V I G+++G FP+ ++ RR Sbjct: 548 TQDSVTLMTLHSAKGLEFPVVFIGGMEDGL--FPSQRSLEDEDKLEEE----------RR 595 Query: 645 LMYVALTRARHRVWALFNKEN----------PSPFVEIL 673 L YV +TRA+ R++ + PS F+E + Sbjct: 596 LCYVGITRAKKRLYLTNCRSRMVYGHVVMYPPSRFLEEI 634 >UniRef50_B2UQR8 UvrD/REP helicase n=2 Tax=Verrucomicrobiaceae RepID=B2UQR8_AKKM8 Length = 668 Score = 322 bits (826), Expect = 2e-86, Method: Composition-based stats. Identities = 94/415 (22%), Positives = 164/415 (39%), Gaps = 61/415 (14%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 + LN AQ +AV + +L+LAGAG+GKT + R ++ RG SP+ IL + F Sbjct: 3 KSFSMESLNAAQRKAVQTLQGPVLILAGAGTGKTRTVTCRIAHMVDRG-ISPKSILAVTF 61 Query: 250 GRKAAEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHEL 306 KAA EM ER+ + + I TFH+L + I+++ ++ + + + Sbjct: 62 TNKAALEMRERVGQMVERKAARQIMVSTFHSLCVRILREDIGRLGYKTNFTIYSGSEQSG 121 Query: 307 FIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMH 366 I + ++ + + S + R + Sbjct: 122 LIRRL-------------------------IVRHGGITEKITPKDVLSSMSRMKNSG--- 153 Query: 367 GGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR 426 L S L A + +++ L+A+N+VDF L+ A +L++ R Sbjct: 154 ---------------LGLDSIEDNLTANIAASYQRELQAQNSVDFDDLLILADKLLKEHR 198 Query: 427 -----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMS 481 + +++I VDEFQD + + +LL L + + VGDD Q+IY + GAQ+S Sbjct: 199 DVREAWQQRFRYITVDEFQDTNSLQMSLLGHLV--GPEHNVCVVGDDDQSIYGWRGAQIS 256 Query: 482 LTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL 541 F F L+ YR + I + AN I+ N G+ K L + G + + Sbjct: 257 NILEFERFFPNPSVIKLEENYRCTAPILDTANALIRHNLGRRDKTLRAHKGGGEAVRLIS 316 Query: 542 -------DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 E + + + +P E IL R + + ++ Sbjct: 317 MPGDAEEAEFIITDIENVRRQEGRPWEDFAILFRANTQSRIIEQTLREHKIPYRM 371 Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 23/99 (23%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 K + +T+HA+KG + V +VGL+EG + ED EERR Sbjct: 545 NKPGVCLITMHAAKGLEFPVVYLVGLEEGILPHKRSL-------------EDGNCDEERR 591 Query: 645 LMYVALTRARHRVWALFNKE----------NPSPFVEIL 673 L+YV +TRA+ ++ + S F+ + Sbjct: 592 LLYVGITRAQEKLMLTYCATRLRYGDRMPCQRSSFLSEI 630 >UniRef50_A9ETX5 ATP-depentend DNA helicase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9ETX5_SORC5 Length = 820 Score = 322 bits (825), Expect = 3e-86, Method: Composition-based stats. Identities = 94/401 (23%), Positives = 149/401 (37%), Gaps = 55/401 (13%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN QARA + LL+ AGAGSGKT V+V R L+ P +IL + F KAA E Sbjct: 24 LNEPQARAASHAAGPLLIFAGAGSGKTRVIVYRIANLIVTHRVPPYRILAVTFTNKAATE 83 Query: 257 MDERIRERLHTE---DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 M R+ + + D+ TFHA+ ++++ + + + K Sbjct: 84 MKRRLEGLIGPDIVKDLWVGTFHAVCARLLRRHHEAAGLDKNFIIYDDDDQRAVMNRVLK 143 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 + N D R++ SR+ + G AE Sbjct: 144 EL-------------------------NLDDRRYPPRQVLSRIH----AEKQEGRGPAEF 174 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK------GRF 427 + +A +A++ LKA +AVDF L+ + I E Sbjct: 175 ERKGYFD---------DAIARCFEAYERHLKAASAVDFDDLLLAVLRIAEDPTSYAGEDL 225 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 ++H+LVDEFQD++ + L+ A K + L VGDD Q+IYR+ GA + + F Sbjct: 226 RGRFRHVLVDEFQDVNQVQYRLVRAFCKSHD--NLCVVGDDDQSIYRWRGADVRIVRGFR 283 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLD 547 +F L+ YR + A I+ + K L + + +S+ D Sbjct: 284 RDFPHATVVKLEQNYRSIGHVVRGALGVIRHASDREPKELWTANQDGAPIDVVAADSEHD 343 Query: 548 ------ALLDKLSGYAKPEERILILARYHHMRPASLEKAAT 582 + +L I + R H E Sbjct: 344 EAAWVVECVRELIAEGVSPNEIAVFYRIHAQSRVLEEVLRE 384 Score = 88.2 bits (217), Expect = 9e-16, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 41/96 (42%), Gaps = 21/96 (21%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 ++ MTIHA+KG + V + G++E F + P EERRL Y Sbjct: 580 KVAMMTIHAAKGLEFHAVFLTGMEEDLFPFRS-----------QDPNRKGDIEEERRLAY 628 Query: 648 VALTRARHRVWALFNKEN----------PSPFVEIL 673 VA+TRAR R+W PS F+ L Sbjct: 629 VAITRARERLWITHAARRAIFGQTRYGLPSRFLADL 664 >UniRef50_P75438 Probable DNA helicase MPN_340 n=1 Tax=Mycoplasma pneumoniae RepID=Y340_MYCPN Length = 529 Score = 322 bits (825), Expect = 3e-86, Method: Composition-based stats. Identities = 118/506 (23%), Positives = 201/506 (39%), Gaps = 75/506 (14%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV +V +GAG+GKT+V+ R +L+ +P+ IL F KAA E Sbjct: 4 LNQEQKAAVTCDNGVNVVYSGAGTGKTTVIAERFAYLVNEKGVNPQSILAFTFTDKAASE 63 Query: 257 MDERIRERLHT---EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 M +RI + + +D+ TFH+ A +Q+ K S + + E Sbjct: 64 MRQRIIKLIPQKSLQDLHIYTFHSFANRFLQKHGK-----SDFAILSDSNRFFSDYEMGD 118 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 Q K +D + + + + Sbjct: 119 QLQTVVEIYKN-----------------------------KVVDLELDNLEYNSAFRDAC 149 Query: 374 IASAPEEIRDLFSKRI-KLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----F 427 + E+ + + + K A L+A++ L N DFS LI + +L+ F Sbjct: 150 TDTFNEDFSTISNGQFRKRAATALRAYQNYLITNNLFDFSDLIIETCHLLKGNSELLQAF 209 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 +ILVDEFQD + + L+ L + LF VGD Q IY + GA + + Sbjct: 210 TESVHYILVDEFQDTNLAQYELVKLLATTHP--NLFLVGDSNQMIYGWRGAVVEIFELLK 267 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSL-TNGDKKAVTLLDESQL 546 +F + YR + VAN + + +K L L ++ D KAV + ++ Sbjct: 268 NDFQAVKEFYTTQNYRSIQAVLAVANDVLTAIARKERKALVLLHSSIDSKAVPVHYKANS 327 Query: 547 DALLDKLSGY---------AKPEERILILARYHHMRPASLEKAAT--RWPKLQIDFMTIH 595 D+ Y P +++ +L R + A + P +++ +TIH Sbjct: 328 LKNQDQWIIYQMKQLHLNNGVPYDQMAVLFRKNKHLDAFSQTVLEDGDLPLAKLNLLTIH 387 Query: 596 ASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARH 655 A+KG + + V + GL E FP+ + + LL EE +L YVA+TRA+ Sbjct: 388 AAKGLEFEAVFVYGLVE--RAFPSLHWDGSDKHKLL---------EEMKLFYVAITRAKQ 436 Query: 656 RVWALF-------NKENPSPFVEILK 674 ++ + PS F+++++ Sbjct: 437 FLFLVSVSVESFNAYYEPSRFLKLIE 462 >UniRef50_A0M3U3 PcrA-like UvrD/Rep family ATP-dependent DNA helicase n=28 Tax=Bacteroidetes RepID=A0M3U3_GRAFK Length = 787 Score = 322 bits (824), Expect = 4e-86, Method: Composition-based stats. Identities = 91/408 (22%), Positives = 167/408 (40%), Gaps = 48/408 (11%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN AQ V+ + ++V+AGAGSGKT VL R +L+ +G IL L F KAA E Sbjct: 22 LNDAQRAPVLQKDGPMIVIAGAGSGKTRVLTYRIAYLMNQG-VDAFNILSLTFTNKAARE 80 Query: 257 MDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 M +RI + + +++ TFH++ I++ + K+ S I K Sbjct: 81 MKQRISKIVGSSEAKNLWMGTFHSVFAKILRFEADKMGYPSNFTIYDTQDSHSVIRAIIK 140 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 + K + + +++ R++S + +++ + Sbjct: 141 EMRLDK---------------------DVYKYKQVYNRISSYKNSLITV---------KA 170 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRFI 428 PE + + + KA+ A+DF L+ + +L + ++ Sbjct: 171 YFQNPELQEADAMSKKPRLGEIYKAYVDRCFKAGAMDFDDLLLKTNELLNRFPEVLHKYQ 230 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 S +K+ILVDE+QD + + ++ AL + + VGDD Q+IY F GA ++ F + Sbjct: 231 SRFKYILVDEYQDTNHSQYLIVRALSDKFQ--NICVVGDDAQSIYAFRGANINNILNFQK 288 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVT--LLDESQ- 545 ++ + L+ YR + I E AN I +N +L K + + K + LL + + Sbjct: 289 DYDNVQMYRLEQNYRSSKNIVEAANSIIDKNQTKLDKIVWTANEDGPKIIVNRLLTDGEE 348 Query: 546 ----LDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 ++ + IL R + A + + +I Sbjct: 349 GRYVASSIFENKMQNQMDNGDFAILYRTNAQSRAMEDALRKKDIPYRI 396 Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 22/144 (15%) Query: 543 ESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQA 602 E L+ + D + G + + L+ + + + ++ MTIH +KG + Sbjct: 531 EELLNGMRDFVEGQKELADATGSLSEFLEDVALATDLDNDTGDDDRVALMTIHLAKGLEF 590 Query: 603 DYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFN 662 YV IVG++E FP+ + E EERRL YVA+TRA + + + Sbjct: 591 PYVYIVGMEEDL--FPSGMSMNTRSEL----------EEERRLFYVAITRAEKQAYLTYT 638 Query: 663 ----------KENPSPFVEILKNL 676 PS F+E + + Sbjct: 639 LSRYRWGKLVDAEPSRFIEEIDDQ 662 >UniRef50_A6GG96 UvrD/REP helicase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GG96_9DELT Length = 693 Score = 321 bits (823), Expect = 5e-86, Method: Composition-based stats. Identities = 99/413 (23%), Positives = 170/413 (41%), Gaps = 49/413 (11%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 ++ S LNPAQ AV++ E LLVLAGAGSGKT V+ R L+ G PE+I+ L+F Sbjct: 1 MDLSSLNPAQREAVLHTEGPLLVLAGAGSGKTRVITHRIARLMELG-TQPEEIVALSFTN 59 Query: 252 KAAEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFI 308 KAAEEM ER+ + + + + TFH+L ++++ K + + + + Sbjct: 60 KAAEEMRERLAKMVGRAKAKALVLGTFHSLGARMMREDPKGFEVPPRFQILDQGDVNGIV 119 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 ++ AK +R + + + +SL + Sbjct: 120 RALLREYGFHGGSAK-------------------------KRWDINAIVQRISLWKNDFL 154 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG--- 425 + AE+ D ++ A L +A+ L+A AVDF L+ + ++L+ Sbjct: 155 SAAEVKRKVSSNDYD------EIAAELYEAYDDRLRALAAVDFDDLVCRIALMLQDNPLT 208 Query: 426 --RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 R+ ++++LVDE+QD + + +L L ++ L VGDD QAIY + GA+++ Sbjct: 209 KKRWRRRFRYLLVDEYQDTNTAQFQMLLELLGEDQ--NLCVVGDDDQAIYGWRGAKVANI 266 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDE 543 F F + L+ YR I AN I N + K L G +K ++ Sbjct: 267 LGFDLYFRNAKVIKLEANYRSRPPITTCANAVIAHNTSRHDKELVPQRTGGEKVQLVVTR 326 Query: 544 SQLDA-------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + + + +L R A + ++ Sbjct: 327 DGPSEAKWVADKIYQLIHERGARPKHCAVLYRSSRQARAVEQNLQEHGLPFRM 379 Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 16/102 (15%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 I T H+SKG + V I+G++EG+ P ++ L EERRL YV Sbjct: 559 ITLSTFHSSKGLEWSQVFIIGVEEGT--LPHKRTDAP----RLSDAIAGDLEEERRLFYV 612 Query: 649 ALTRARHRVWALFNKEN----------PSPFVEILKNLDVPV 680 +TRAR R+W PS F++ L D V Sbjct: 613 GITRARDRLWMTRAATRVDRGRELEIKPSRFLDELPEPDSGV 654 >UniRef50_P03018 DNA helicase II n=409 Tax=cellular organisms RepID=UVRD_ECOLI Length = 720 Score = 321 bits (822), Expect = 7e-86, Method: Composition-based stats. Identities = 101/402 (25%), Positives = 159/402 (39%), Gaps = 56/402 (13%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN Q AV +LLVLAGAGSGKT VLV R WL++ SP I+ + F KAA Sbjct: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 Query: 256 EMDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM RI + + T + TFH LA +++ + + + + K Sbjct: 69 EMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK 128 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 + + +QW + W + N DE L+ Sbjct: 129 AMNLDE------KQWPPRQAMWYI---NSQKDEGLR------------------------ 155 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRFI 428 P I+ + + + +A++ A VDF+ L+ +A + + Sbjct: 156 ----PHHIQSYGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYR 211 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 + +ILVDEFQD + + A + L + + VGDD Q+IY + GAQ+ F Sbjct: 212 ERFTNILVDEFQDTNNIQYAWIRLLAGDTGK--VMIVGDDDQSIYGWRGAQVENIQRFLN 269 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKK-----AVTLLDE 543 +F E L+ YR S I AN I+ N G+L K L + + A LDE Sbjct: 270 DFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDE 329 Query: 544 SQLDALLDKLSGYAKPEE---RILILARYHHMRPASLEKAAT 582 ++ +++++ + IL R + E Sbjct: 330 ARF--VVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQ 369 Score = 89.7 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 52/131 (39%), Gaps = 22/131 (16%) Query: 555 GYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGS 614 Y + +E ++ L + + + + MT+H++KG + V IVG++EG Sbjct: 520 SYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGM 579 Query: 615 DGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKE---------- 664 FP+ E EERRL YV +TRA ++ + + Sbjct: 580 --FPSQMSLD----------EGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYH 627 Query: 665 NPSPFVEILKN 675 PS F+ L Sbjct: 628 RPSRFIGELPE 638 >UniRef50_A6CC22 ATP-dependent DNA helicase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CC22_9PLAN Length = 755 Score = 321 bits (822), Expect = 8e-86, Method: Composition-based stats. Identities = 83/401 (20%), Positives = 145/401 (36%), Gaps = 48/401 (11%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 L P Q AV + + LLVLAG GSGKT V+ R L+ QIL + F KAA+E Sbjct: 7 LTPPQFAAVSHHQGPLLVLAGPGSGKTRVITHRIASLI-HAHVPAHQILGITFTNKAADE 65 Query: 257 MDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCS 316 M ER+R+ + + TFH + I+++ + V + S + I + Sbjct: 66 MGERVRQLIPDSRVEISTFHKFCVKILRRYGRGVGLDSNFSIFDTTDQQQLIRFVLNELD 125 Query: 317 EKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIAS 376 ++ + ++ + +++ R Q Sbjct: 126 IDTVA---------------------YNPSTIASMISRAKNDLITVDRFVEIYQE----- 159 Query: 377 APEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRFISPW 431 + + A + ++ L NAVDF L+ +L+ + + Sbjct: 160 ------SVGDHLQAVAARVYPMYQKLLLESNAVDFDDLLLHVASLLKGSPELRATLDERY 213 Query: 432 KHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFG 491 ++ILVDE+QD + + ++ L L GD Q+IY + GA++ F +F Sbjct: 214 QYILVDEYQDTNLAQYQIIMGLSLNTR--NLCVTGDPDQSIYGWRGAKIENILQFERDFP 271 Query: 492 EGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL-------DES 544 + + L+ +R I VA+ I N + K L + L + Sbjct: 272 DCKTIRLEQNFRSTKEILRVADDLISHNQRRKVKSLFTENEEGSPVELLCFQDERHEADD 331 Query: 545 QLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWP 585 + + + + I R + LE A R Sbjct: 332 IARRIRNAVDQGKQEYTDYAIFYRVNS-LSRELELALARHK 371 Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 56/146 (38%), Gaps = 24/146 (16%) Query: 543 ESQLDALLDKLSGYAKPEERIL----ILARYHHMRPASLEKAATRWPKLQIDFMTIHASK 598 + Q A +++L AK + I L + + + ++ MT+HA+K Sbjct: 501 DQQRIANVNELLSTAKKYDDIYGEETTLEGFLEVSTLASATDQLDTDAGRVTLMTLHAAK 560 Query: 599 GQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVW 658 G + V IVG+++ RE + EERRL +V +TRA ++ Sbjct: 561 GLEYPVVFIVGVEQNLIPHERVLREEFRDGL----------EEERRLFFVGITRAEQNLY 610 Query: 659 ALFNKENP----------SPFVEILK 674 +E S F++ + Sbjct: 611 LTQTRERSMRGRPWRTITSDFLKEID 636 >UniRef50_A1AVZ1 UvrD/REP helicase n=3 Tax=Gammaproteobacteria RepID=A1AVZ1_RUTMC Length = 718 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 95/406 (23%), Positives = 173/406 (42%), Gaps = 54/406 (13%) Query: 194 SSPLNPAQARAVV-NGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 ++ LN Q ++V N E + L+LAGAGSGKT VL R +L+ + + + IL + F K Sbjct: 7 TNDLNDKQCQSVTFNNEKNALILAGAGSGKTRVLTHRIAYLITQKDIRIDAILAVTFTNK 66 Query: 253 AAEEMDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 AA EM ER+ L + + TFH+LA +++ +K + S + A + Sbjct: 67 AATEMRERLSTLLRRPIQSMWMGTFHSLAHRLLRTHYEKSKLTSGFQILDAQDQFRIVKR 126 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 K+ S ++ ++ +++QW + D Sbjct: 127 LMKENSIDES------KFPIKKVQWFINNQKNEDIRA----------------------- 157 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG----- 425 ++I ++ IK + + ++ + + +DF+ L+ ++ +L+ Sbjct: 158 --------QDIDPDYNYFIKKNLEVFELYEAYCQENDLIDFAELLIRSYELLKNNTDLLN 209 Query: 426 RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 + + ++HILVDEFQD + + + L N +F VGDD Q+IY + GA++ T Sbjct: 210 HYQARFEHILVDEFQDTNTVQYKWIKLLF--NGHNKIFCVGDDDQSIYGWRGAKIENITK 267 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDK-----KAVTL 540 +F E L YR I +N I N ++ K L + + +A T Sbjct: 268 LCTDFTPIETIRLKQNYRSTGNILNASNALITHNVNRMGKSLWTDAGNGELIDVYEARTE 327 Query: 541 LDE-SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWP 585 DE + + + + KL IL R++ + E+A ++ Sbjct: 328 TDEANYVISNIQKLITNGASPSDCSILYRFNA-QSRIFEEALIKYN 372 Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 64/214 (29%), Gaps = 50/214 (23%) Query: 476 SGAQM--SLTTAFHENFGEGERCDLD---TTYRFNSR-IGEVANRFIQQNPGQLKKPLNS 529 A S + + + +L T S I +N I LKK + Sbjct: 452 RAANALSSFINLIKQITDDTKHLNLSEKVTNLLNTSGLIMHYSNDKIGSKKENLKKLITI 511 Query: 530 LTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + + + E L L I + Sbjct: 512 TKQYNHEQDNKMSEVMGFISLTSLDSSGNTNASI----------------------NQNV 549 Query: 590 DFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVA 649 MTIH++KG + V +VG++E FP+ E EERRL YV Sbjct: 550 QLMTIHSAKGLEFPCVFLVGMEEDL--FPSR----------QSKNEPHLTDEERRLCYVG 597 Query: 650 LTRARHRVWALFN----------KENPSPFVEIL 673 +TRA ++ + PS F+ + Sbjct: 598 MTRAMKKLSLSYAIKRFLYGQSLYAYPSRFLNEI 631 >UniRef50_Q21PD1 ATP-dependent DNA helicase Rep n=15 Tax=Gammaproteobacteria RepID=Q21PD1_SACD2 Length = 672 Score = 320 bits (819), Expect = 1e-85, Method: Composition-based stats. Identities = 98/414 (23%), Positives = 154/414 (37%), Gaps = 54/414 (13%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + LNP Q AV + LVLAGAGSGKTSV+ + +++ I + F KAA Sbjct: 2 TTLNPRQKEAVHYIDGPSLVLAGAGSGKTSVITRKIAYMIQECGIPARHIAAVTFTNKAA 61 Query: 255 EEMDERIRERL---HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 EM ER+ + + +T TFH L L+II++ K + S I E Sbjct: 62 REMKERVTKLVKGSAARGLTVSTFHNLGLNIIRREHKTLGFKSGFTIFDQEDARGLIKEI 121 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 + + Q S++ W + Sbjct: 122 MLKDGDTNTDMIDLVQ--------------------------SQISNWKN---------- 145 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----R 426 + E + S+ + A + + + ALKA NAVDF LI + + R Sbjct: 146 -GLIEPDEALSKAQSEGEQTWALVFERYNKALKAYNAVDFDDLIRLPSKLFSEHPEVLNR 204 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + +++LVDE+QD + + ++ L + TL VGDD Q+IY + GA+ + Sbjct: 205 WQQRIRYLLVDEYQDTNSSQYKVVQQLI--GDRGTLTVVGDDDQSIYAWRGARPENMSLL 262 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL------ 540 +F L+ YR +RI + AN I NP + K L S + + Sbjct: 263 KVDFPSLHVIKLEQNYRSTARILKAANVLIANNPHEFDKTLWSDLGMGETIRVIKCPTED 322 Query: 541 -LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 E +L + + +L R +H K I T Sbjct: 323 AEAERVATEILTQRLRRQCKFKDFAVLYRGNHQARLMELKLQHHQIPYNISGGT 376 Score = 89.4 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 23/114 (20%) Query: 575 ASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPV 634 LE+ ++ MT+HASKG + +V ++GL+E + E +E Sbjct: 543 DMLERQEEEDETDRVQLMTLHASKGLEFPHVFLLGLEEEILPHRNSIEEDNIE------- 595 Query: 635 EDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDV 678 EERRL YV +TRA+ + PS F++ L DV Sbjct: 596 ------EERRLAYVGITRAQRTLTMTLAGTRKQFGEKQTTTPSRFLDELPPEDV 643 >UniRef50_C1TPS7 DNA/RNA helicase, superfamily I n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TPS7_9BACT Length = 656 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 98/415 (23%), Positives = 156/415 (37%), Gaps = 58/415 (13%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNP Q AV LLVLAGAGSGKT VL ++ WL+A P +IL + F KAA Sbjct: 10 SLNPRQREAVSYEGTPLLVLAGAGSGKTRVLTSKLAWLVAERSVPPWRILAVTFTNKAAR 69 Query: 256 EMDERIRERLHTEDI--TARTFHALALHII---QQGSKKVPIVSKLENDTAARHELFIAE 310 EM +R+ L TFH+ L ++ + + + Sbjct: 70 EMKDRVDAMLDGGYPYGQISTFHSFGLQMLFRNRDALEARGYRRNFVVFDRGDSLSLV-- 127 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 + S+ + + + + + G Sbjct: 128 -----------------------KKSMKAMKLDTSQMEPSWVLECISKAKT-----GSDP 159 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRF--- 427 M + E MA L + +LK + A DF LI + ++ R Sbjct: 160 VSMDGAILE----------GDMAELYSLYTKSLKEQGAFDFDDLIVMPLHLMSTDRDILK 209 Query: 428 --ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 ILVDE+QD++ + ALL L + + AVGD Q+IY + GA MS+ Sbjct: 210 KERDRLDWILVDEYQDVNRPQFALLRLLAGDSP--NVMAVGDPDQSIYGWRGADMSVILG 267 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKK--AVTLLDE 543 F +F + L+ YR I + AN I N + +K L + +G + VTL DE Sbjct: 268 FERHFPGSKVILLEQNYRSTETILDAANSVIGNNVNRPEKRLWTARSGGEPINVVTLGDE 327 Query: 544 ----SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTI 594 + ++++L + +L R + + ++ R ++ T Sbjct: 328 RAEARYVSDVVEELLSLGYRYTDMAVLYRMNALSRNFEQEFVKRGLPYRVVKGTA 382 Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 21/97 (21%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 I ++HA+KG + V IVG+++G FP + L EERRL YV Sbjct: 544 ISLSSLHAAKGLEFPVVFIVGMEDGI--FPHGRSLDGGRDEL---------EEERRLCYV 592 Query: 649 ALTRARHRVWALFNK----------ENPSPFVEILKN 675 +TRA R++ ++ + S F+ + Sbjct: 593 GMTRAEERLYLTSSRFRRLFGSVMNNDVSRFIWEIPE 629 >UniRef50_C8WP33 UvrD/REP helicase n=3 Tax=Coriobacteriaceae RepID=C8WP33_EGGLE Length = 813 Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats. Identities = 88/412 (21%), Positives = 159/412 (38%), Gaps = 51/412 (12%) Query: 191 QVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFG 250 ++ LN Q AVV + LLVLAGAGSGKT VL R L+ + +P +IL + F Sbjct: 2 SIDIDSLNGPQREAVVTVDGPLLVLAGAGSGKTRVLTYRIANLIENHDVAPWEILAITFT 61 Query: 251 RKAAEEMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFI 308 KAA EM ER+ + + TFH++ + +++ ++K+ + Sbjct: 62 NKAAAEMRERLNGLVGPRCRGMWVSTFHSMCVRMLRSDAEKLGFTRNFTIYDTDDQKRLY 121 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 E + D ++ +LM Sbjct: 122 KEIMAELD--------------------------IDPKRFP---------VNALMNRIST 146 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-- 426 A+ E++ + E ++ K+ + + + LKA NA DF L+ A ++L+ Sbjct: 147 AKNELVVPSAFE-KEAGDPVGKVASRVYSRLQERLKAANAFDFDDLLLYAYLLLKNHEDV 205 Query: 427 ---FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 + +++I+VDE+QD + + ++ L + + VGDD Q+IY + GA + Sbjct: 206 RSAYQQRFRYIMVDEYQDTNHAQYSITGLLAE--GHKNIMVVGDDDQSIYSWRGADLRNI 263 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL-- 541 F +++ L+ YR + AN I N + K L + K + Sbjct: 264 LEFEQDYPTAHTVKLEQNYRSVGNVLAAANAVIANNQHRKAKKLFTSAEDGDKIQVYMAA 323 Query: 542 ---DESQLDA-LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 DE + A ++K ++ + R + + +I Sbjct: 324 DERDEGRWIAGEIEKQRAAGLSYNQVAVFYRTNAQSRMLEDMLLRAGVPYRI 375 Score = 89.4 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 22/95 (23%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + MT+H+SKG + D V + G++E + + EERRL YV Sbjct: 603 VTMMTVHSSKGLEFDCVFVAGMEETLFPH------------MNSVGDAAGIEEERRLAYV 650 Query: 649 ALTRARHRVWALFNKENP----------SPFVEIL 673 A+TRAR +++ S F++ + Sbjct: 651 AITRARKKLFLTCAYARQIFGQTSSNPISRFIQEI 685 >UniRef50_C5TB61 UvrD/REP helicase n=3 Tax=cellular organisms RepID=C5TB61_ACIDE Length = 778 Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats. Identities = 99/417 (23%), Positives = 165/417 (39%), Gaps = 60/417 (14%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 S+ LN AQ +AV + + LVLAGAGSGKT V+ + ++ +G P +I + F KA Sbjct: 89 SAGLNLAQLQAVHYTQGACLVLAGAGSGKTRVITHKIAHMIEQG-LEPRRIAAITFTNKA 147 Query: 254 AEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 A EM ER + + +D+ TFHAL + ++++ + + + A +A Sbjct: 148 AAEMRERAKGLIGRRAKDVLVCTFHALGVRMVREDGAVLGLKPQFSIMDADD----VAGI 203 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 K + RQW QW+ + +W ++ A A Sbjct: 204 LKDAAGGTTDLATARQW-----QWT-------------------ISKWKNMGLSSEQALA 239 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-RFISP 430 + + +A ++ ++ L A +VDF LI + +L + Sbjct: 240 QA-----------ADDNERSIAVVMARYEERLAAYQSVDFDDLISMPLRLLRDHPEVRAK 288 Query: 431 WK----HILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 W+ H+LVDE+QD + + LL L + AVGDD Q+IY + GA + Sbjct: 289 WQALLGHVLVDEYQDTNATQYELLKLLVGERGH--FTAVGDDDQSIYGWRGATLDNLKKL 346 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQL 546 ++F + + L+ YR S I AN I NP K L S + V ++D Sbjct: 347 PQDFPQLKVIKLEQNYRSTSAILRAANNVIGPNPKLFPKTLFSELGEGEP-VRVVDADTE 405 Query: 547 DALLDK----------LSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 + ++ S + IL R +H + ++ T Sbjct: 406 EHEAERAVARIQSLRAASNPPPDWKSFAILYRANHQAKPFEKALRRANIPYKVSGGT 462 Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 57/143 (39%), Gaps = 22/143 (15%) Query: 541 LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQ 600 +D++ + + + + I +L+ + + T+HASKG Sbjct: 612 IDDTAGAVVARETKSLLEVSQTIALLSTISE----------REKEQDMVTLSTLHASKGL 661 Query: 601 QADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWAL 660 + +V++VG+ EG F + + + EERRLMYV +TRA+ + Sbjct: 662 EWPHVVLVGVTEGMLPF--KLDDDEGRQQKVTDDTLQRLQEERRLMYVGITRAQRTLAVS 719 Query: 661 FNKE----------NPSPFVEIL 673 + K+ PS F+ + Sbjct: 720 WTKKRKKGREMVAAQPSRFIAEM 742 >UniRef50_Q68WT1 DNA helicase II n=17 Tax=Rickettsieae RepID=UVRD_RICTY Length = 658 Score = 318 bits (816), Expect = 3e-85, Method: Composition-based stats. Identities = 86/403 (21%), Positives = 160/403 (39%), Gaps = 43/403 (10%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 LN Q +A ++ E LL+LAGAG+GKT VL +R ++ + A P IL + F KAA Sbjct: 12 HTLNSEQKKAALHTEGPLLLLAGAGTGKTKVLTSRIANIIQQNLALPHNILAVTFTNKAA 71 Query: 255 EEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 +EM ER+ ++ + TFH++A I++ + + + ++ I Q Sbjct: 72 KEMSERVHNLINCYGVNIGTFHSMAAKILRDQIENLNL--------GLNNKFTIISHDDQ 123 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 + K K + T+ + + + + RW + A Sbjct: 124 LTLVKDIVKLKKDIDTK--------------KYTPKLIHIIISRWKDQGLLPSKLSASDT 169 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FIS 429 + + L + + ++ L N +DF L+ + K + Sbjct: 170 NLPLQRVAKL----------IYEEYQKNLLISNVLDFGDLLLYNNELFIKNPEILKYYQE 219 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 +++IL+DE+QD + + L + VGDD Q+IY + GA++ F ++ Sbjct: 220 KYRYILIDEYQDTNIAQYLWARMLASLYR--NICCVGDDDQSIYGWRGAEVGNILRFEKD 277 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDAL 549 F L+ YR I A+ I N + K L + + +K + + Sbjct: 278 FAGATIIKLEQNYRSTLPILAAASNVINNNKNRHSKTLWTDSASGEKIKII----SCLSD 333 Query: 550 LDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFM 592 ++ A ++++ RYH A L +A + + F+ Sbjct: 334 KEEARYIACEIDKLVREERYHAGNIAILVRAGFQTRSFEEAFI 376 Score = 95.1 bits (235), Expect = 8e-18, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 65/176 (36%), Gaps = 28/176 (15%) Query: 514 RFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYH--- 570 +FI P + K + D +++L E + + ++ + I H Sbjct: 479 KFITDTPINVVKTIL----DDSGYLSMLQEEKTEEAFGRIENINEMLRAIAEFNDIHDFI 534 Query: 571 -HMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEA 629 H + + MT+HA+KG + D V + G +EG FP+ Sbjct: 535 EHSSLVMENEVLETNYGGSVTIMTLHAAKGLEFDVVFLPGWEEGV--FPSQRS------- 585 Query: 630 LLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKN 675 L + EERR+ YV +TRA+ ++ + PS F+ + + Sbjct: 586 -LDEDGEKGLEEERRIAYVGITRAKKDLYITHAESRKIFYEIVHSCPSRFINEIPD 640 >UniRef50_D0RN21 ATP-dependent DNA helicase PcrA n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RN21_9RICK Length = 742 Score = 318 bits (815), Expect = 4e-85, Method: Composition-based stats. Identities = 92/399 (23%), Positives = 160/399 (40%), Gaps = 52/399 (13%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + LN Q AV N E L VLAGAGSGKT VL +R +L+ + + +QIL + F KAA Sbjct: 6 NSLNNQQKLAVSNTEGPLQVLAGAGSGKTKVLTSRIAYLIQQKKCFGQQILCVTFTNKAA 65 Query: 255 EEMDERIRERLHTEDI---TARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 EM ER+ + ++++ + TFH++ ++++ S+ V + I Sbjct: 66 SEMRERVLKLVNSKSVAFPWLGTFHSICNKMLRKNSEAVGLKPNFTIIDTLDQIKLIKNI 125 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 + N + +++A +D+W + + + Sbjct: 126 -------------------------LSAENIDIKKNPPKQIAFYIDQWKNKALLPEQVKL 160 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR----- 426 + + + K ++ L N VDF LI + IL+K Sbjct: 161 KN-----------QEFNLVNALKVYKIYQKKLLVMNCVDFGDLILHVVTILKKFEDIKKI 209 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + +K+ILVDEFQD + + L L + + + VGDD Q+IY + GA++ F Sbjct: 210 YQRNFKYILVDEFQDTNYVQNFWLQLLTSE--KKNICVVGDDDQSIYSWRGAEVKNILEF 267 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVT------L 540 N+ + L+ YR I A I N +L+K + S +K + Sbjct: 268 KNNYQNTQTIKLEQNYRSTENILNSATSLISNNEDRLEKNIWSELGDGEKVKIKSYFDGI 327 Query: 541 LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEK 579 + + + ++++ I IL R E+ Sbjct: 328 SEATGVSDIIEQNLSKKFKLNEISILVRAAFQTREFEER 366 Score = 91.7 bits (226), Expect = 9e-17, Method: Composition-based stats. Identities = 30/148 (20%), Positives = 57/148 (38%), Gaps = 28/148 (18%) Query: 552 KLSGYAKPEERILILARYHHMRPASLEKAA--TRWPKLQIDFMTIHASKGQQADYVIIVG 609 +L + + + + + + A W +I+ MTIH++KG + D V + G Sbjct: 505 RLENLKELKSSMKNYSSLNEFLENISLQTAIDEEWDGEKINIMTIHSAKGLEFDAVFLPG 564 Query: 610 LQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN---- 665 +EG + E + EERRL YVA+TRA+ ++ F + Sbjct: 565 WEEGLFPHQKSIDEKGADGI----------EEERRLAYVAITRAKKELFISFANQRKFYG 614 Query: 666 ------------PSPFVEILKNLDVPVA 681 S F++ + + ++ Sbjct: 615 RQNDNYDFYSSLQSRFIDEIDDKYTKIS 642 >UniRef50_B1AJE0 ATP-dependent DNA helicase PcrA n=15 Tax=Ureaplasma RepID=B1AJE0_UREP2 Length = 743 Score = 318 bits (815), Expect = 4e-85, Method: Composition-based stats. Identities = 101/404 (25%), Positives = 159/404 (39%), Gaps = 42/404 (10%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 ++ S LN Q AV LV+AGAG+GKTSVL R +L+ P +IL F Sbjct: 5 IDYSRLNQEQKEAVTADLGPQLVIAGAGTGKTSVLTLRIAYLITEKNIHPSRILGFTFTN 64 Query: 252 KAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 KAA+EM ER+ + + TFH++ + I+QQ + + ++ E+ + E Sbjct: 65 KAADEMKERVGKTIGVSIPYLSTFHSMCVKILQQDIHYLNYHNNIKIIDTDDQEVLLKEI 124 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 Q + +K + S + F+D + + V L Sbjct: 125 FDQLNIEKKS----QVIKKIIKTISKVKNKFFDQNDMLNEKNHKYLELVDL--------- 171 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GR 426 + + + K + N VDF LI+ + + + Sbjct: 172 ---------------NDAQRLVDIYKIYCDRCFKLNYVDFDDLINLTHKLFIEFPEVLEK 216 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + + + +ILVDEFQD + + L++ L ++ LF VGD Q IY F GA+ + F Sbjct: 217 WQNKFDYILVDEFQDTNKIQYDLISLLATKHQ--NLFVVGDPDQMIYSFRGAEQWIINNF 274 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL----- 541 +NF + L T YR I ANR I N KK L + D L Sbjct: 275 SQNFKNTKVTILKTNYRSTQPILNTANRLIDANNNNYKKNLTAFNTNDNNLPIYLRGQNP 334 Query: 542 -DESQLDAL-LDKLSGYAKPEERILILARYHHMRPASLEKAATR 583 DE+ A + +L P +I +L R +H + Sbjct: 335 IDEANWIARKIRELLEEGTPANQIAVLFRSNHYSRTIEQSMMRE 378 Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 19/98 (19%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 K + MT+H SKG + + V + G+ EG A + ++ EERR Sbjct: 551 SKENVLLMTVHNSKGLEYENVFVAGMNEGLLPSDRAINDDPIKGV----------EEERR 600 Query: 645 LMYVALTRARHRVWALF---------NKENPSPFVEIL 673 + YVALTRA+ ++ + S F+ + Sbjct: 601 IAYVALTRAKKNLYISSACCYDPLARRQVFESRFINEI 638 >UniRef50_Q98PM4 ATP-DEPENDENT HELICASE PCRA n=1 Tax=Mycoplasma pulmonis RepID=Q98PM4_MYCPU Length = 734 Score = 318 bits (815), Expect = 4e-85, Method: Composition-based stats. Identities = 88/401 (21%), Positives = 166/401 (41%), Gaps = 49/401 (12%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 S LN Q AVV + L ++AGAGSGKT V+ ++ +L+ + +P +IL L F KAA Sbjct: 3 SNLNQRQKEAVVYTKGPLRIIAGAGSGKTRVITSKIAYLIEHEKIAPWKILGLTFTNKAA 62 Query: 255 EEMDERIRERLHTED--ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM ER + + + + TFH+L I++Q K+ E + + + Sbjct: 63 REMKERALKMIGPKASHVELSTFHSLCNVILKQDIDKIGYPKNFEIVDESDKKQILKGIY 122 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 + + W + +++ M+ + + Sbjct: 123 LELAITTKDVSIWDAF-----------------------------DYIAKMK-----KNK 148 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRF 427 +S EE+ + + + L+ + K + LK ++ +DF LI + + ++ Sbjct: 149 YFSSIEEELDNENEEDLALLKNIYKGYVSYLKKQSLLDFDDLIILTYELFSSSDLTRQKW 208 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 S + ++LVDEFQD S + ++ L S + VGD Q IY + G+ + F Sbjct: 209 ASKYDYVLVDEFQDTSFIQYEIVKVLA---SNKNITIVGDPDQNIYSWRGSDFRIMLNFD 265 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQ-- 545 ++F + + + YR I E+AN+ I+ N +++K L S + + L + Sbjct: 266 KDFENTKTINFEQNYRSTPNILEIANKLIKNNKNRMEKNLFSTSARGADPLFLTKYNNKL 325 Query: 546 -LDALLDKLSGYAKP--EERILILARYHHMRPASLEKAATR 583 +++K+ ++ +I I R E+ Sbjct: 326 EAKWIVEKIIELSQQTKYSQIAIFTRTAKYSRDLEEELFQN 366 Score = 84.4 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 21/101 (20%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 Q+ MT H++KG + DYV I GL E FP +L D EERR Sbjct: 544 NSDQVSIMTAHSAKGLEFDYVFITGLAE--KHFPHFL-------SLKSNDYDDEIEEERR 594 Query: 645 LMYVALTRARHRVWALFNKE------------NPSPFVEIL 673 L YVA+TRA+ +++ S F+E + Sbjct: 595 LCYVAVTRAKKQLFLTAPLTLYWARDREKEELEISRFIEEM 635 >UniRef50_D2R5I6 UvrD/REP helicase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5I6_9PLAN Length = 800 Score = 318 bits (814), Expect = 5e-85, Method: Composition-based stats. Identities = 81/413 (19%), Positives = 153/413 (37%), Gaps = 46/413 (11%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 L AQ AV + E LL+LAG GSGKT V+ R W+LA G QIL L F KAA+ Sbjct: 25 SLTDAQRAAVCHIEGPLLILAGPGSGKTRVVTHRVAWMLASG-IPARQILALTFTNKAAD 83 Query: 256 EMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQC 315 EM R+ + + TFH +++ ++ V + + + Sbjct: 84 EMRGRLERLAPRQAVWMGTFHRFCARMLRSYAELVGLRENFSIYDTDDSRKILQIALDE- 142 Query: 316 SEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIA 375 E + + + W+ + N ++ + R + Sbjct: 143 -EGIDLTHTSPDAIAQAISWA--KNNLVTADRYEPRRGHAIG------------------ 181 Query: 376 SAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISP----- 430 ++ + ++ + +AVDF L+ ++L++ + Sbjct: 182 --------------GIVEKVYPTYQKLMLRSSAVDFDDLLVHVAILLKENPEVRRQLDER 227 Query: 431 WKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENF 490 +++I+VDE+QD + + ++ AL + L GD Q+IY + GA +S F +++ Sbjct: 228 YRYIMVDEYQDTNLAQYTIVRALSIDHP--NLAVTGDPDQSIYGWRGANLSNILEFEKDY 285 Query: 491 GEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALL 550 + + L+ YR I +A++ I+ N + +K L + N V L Sbjct: 286 PKVKVVRLEQNYRSTKSILHIADQLIRHNIRRKEKDLFT-DNPQGNRVRLATFPTQRDEA 344 Query: 551 DKLSGYAKPEERILILARYHHMRPASLEKAATRWPK-LQIDFMTIHASKGQQA 602 + ++ E R + + L+ + G + Sbjct: 345 ETIAEEIAHEVRTGKRRPRDFAIFYRTNALSRQIEHALREQVIPYQIVNGLEF 397 Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 33/99 (33%), Gaps = 22/99 (22%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 ++ MT+HA+KG + V IV +EG P E+ F Sbjct: 562 DSDKVTMMTLHAAKGLEFPAVYIVACEEGL--LPHERSRRDEEKLEEERRLLF------- 612 Query: 645 LMYVALTRARHRVWALFNKEN----------PSPFVEIL 673 V +TRA + + + S F+ L Sbjct: 613 ---VGITRAMQDLTLTWAQYRMFRGQQAPAVASSFLMEL 648 >UniRef50_Q1DAU6 ATP-dependent DNA helicase, UvrD/REP family n=6 Tax=Cystobacterineae RepID=Q1DAU6_MYXXD Length = 691 Score = 318 bits (814), Expect = 5e-85, Method: Composition-based stats. Identities = 97/394 (24%), Positives = 159/394 (40%), Gaps = 53/394 (13%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLAR--GEASPEQILLLAF 249 ++ S LNP Q AVV E LLVLAGAGSGKT V+ R LL G IL + F Sbjct: 1 MDLSKLNPPQREAVVTLEGPLLVLAGAGSGKTRVITHRIVHLLNERPGLIMARNILAVTF 60 Query: 250 GRKAAEEMDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 KAA EM ER+ + TFHA ++++ ++ K Sbjct: 61 TNKAATEMKERLVHMAGPRAQGVLVCTFHAFGAEMLREDIHRLGWPKKFAIADMGDQ--- 117 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 +A R+ E K + + R++ + + + + Sbjct: 118 LANIRRAMREHKIDDRSFD----------------------ARKVLNLISKAKN------ 149 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-- 425 + PE I D + + + ++ +LKA+ +VDF L+ +L + Sbjct: 150 --SGKAPEPKPEGIGDDYDLITHM---VYPDYQLSLKAQGSVDFDDLLLLPARLLREHPD 204 Query: 426 ---RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 ++ ++++LVDEFQD + + LL L + AVGDD Q IY + GA++ Sbjct: 205 LYEKYTKRFRYLLVDEFQDTNTAQLELLKLLA--GRSRNVCAVGDDDQCIYSWRGAEVRN 262 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL- 541 F F G+ L+ YR + + AN I +NP + K + + G K + Sbjct: 263 ILDFDRLFPGGKEVRLEQNYRSVQTVLDAANAVIAKNPERKAKQMWTDRTGGTKVKVVTC 322 Query: 542 --DESQLDALLDKLS---GYAKPEERILILARYH 570 DE + + ++ + I +L R + Sbjct: 323 PNDEEEARFVAHEIQKHMALGISADDIAVLYRTN 356 Score = 81.7 bits (200), Expect = 9e-14, Method: Composition-based stats. Identities = 44/208 (21%), Positives = 70/208 (33%), Gaps = 32/208 (15%) Query: 496 CDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSG 555 DL YR G++AN ++ ++ + + +D +L+ L Sbjct: 461 VDLVERYRAAYEHGQLAN-VTRKLLEEIGFREATRAHATSATAADKKLKGVDGVLNSLEN 519 Query: 556 YAKPEERILILARYHHMRPASLEKAATRWPKLQ--IDFMTIHASKGQQADYVIIVGLQEG 613 + K E L Y + + P + MT+HASKG + V +G++E Sbjct: 520 FEKREGPKASLPTYLNRLSLDTRQEEEEVPGANRRVTLMTVHASKGLEYRLVFFIGMEED 579 Query: 614 SDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN-------- 665 E EERRL YV +TRA+ ++ Sbjct: 580 LMPH------------GGMQGEAQNLEEERRLCYVGITRAKEVLYLTRAATRVKRGKEVP 627 Query: 666 --PSPFVE-------ILKNLDVPVARKP 684 PS F+E + LD P P Sbjct: 628 RTPSRFLEDLPPEVIEVVELDAPRQGPP 655 >UniRef50_A7Z3H2 YjcD n=3 Tax=Bacillus RepID=A7Z3H2_BACA2 Length = 761 Score = 318 bits (814), Expect = 6e-85, Method: Composition-based stats. Identities = 103/426 (24%), Positives = 171/426 (40%), Gaps = 66/426 (15%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN Q +AV + LLVLAGAGSGKT VL ARA ++ SPE +LL+ F KA Sbjct: 136 GLNREQMKAVTETDGPLLVLAGAGSGKTRVLTARAAHMIEHLGISPENMLLVTFTTKAVA 195 Query: 256 EMDERIRERLH-----TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 EM ER+ + TFH+ I+ S +L E Sbjct: 196 EMKERMANEYGLAAGKVSRLVTGTFHSFFYKILYHYDSSKWNGS----------QLLKME 245 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 W+K+ KKA + ++ E F D+ LQ + W + Sbjct: 246 WQKEQYVKKAL-----------YEENLDEKEFPVDQALQ-----LIGCWKNTY------- 282 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----G 425 P E L K + L + ++ + + DF + + + Sbjct: 283 ------LPHETIPLADDWEKKVYRLYEHYERQKREKRQFDFDDMAQGCYELFQSRPDILA 336 Query: 426 RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 ++ + + HIL+DEFQDI+P + ++ + + L VGDD Q+IY F G+ S Sbjct: 337 QYQNRFSHILIDEFQDINPVQYNIMQMIAS--PENNLCCVGDDDQSIYAFRGSSPSFILD 394 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL--LDE 543 F +++ + L YR I A+ +++N + +K L+++ +G V DE Sbjct: 395 FQKDYPAAKTIYLTANYRSPHPIVSSAHAVVKKNKKRYEKTLSAVKDGVHNPVMFYPYDE 454 Query: 544 SQLDALL-----DKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASK 598 + ++ +K+ A P++ ++ R + +L + HA + Sbjct: 455 EEEATMIVSDMKEKIQNGASPDDFAVLYRTNSAGRAI--------YERLHQSSIPYHADR 506 Query: 599 GQQADY 604 G Q Y Sbjct: 507 GVQTFY 512 Score = 85.1 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 13/101 (12%) Query: 583 RWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEE 642 + + ++ +TIH SKG + + V I+G +GS A + + P EE Sbjct: 661 KTDENGVELLTIHRSKGLEFNTVYILGAADGSIPHDFALETAR-------QGDPAPLEEE 713 Query: 643 RRLMYVALTRARHRVWALFNKE------NPSPFVEILKNLD 677 RRL+YVA+TRA ++ S F+E L D Sbjct: 714 RRLLYVAMTRAMQHLYVSCPAYRRGKTARSSRFLEPLLRTD 754 >UniRef50_A7KV33 PcrA helicase n=1 Tax=Bacillus phage 0305phi8-36 RepID=A7KV33_9CAUD Length = 657 Score = 318 bits (814), Expect = 6e-85, Method: Composition-based stats. Identities = 100/406 (24%), Positives = 167/406 (41%), Gaps = 57/406 (14%) Query: 196 PLNPAQARAVV-NGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 LNPAQ AVV ++ LV+AGAGSGKT VL R G++L G P +IL + F KAA Sbjct: 21 GLNPAQKEAVVKTVKNPSLVIAGAGSGKTRVLQKRVGYILENG-IDPRRILTVTFTNKAA 79 Query: 255 EEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 EM ERI + + I TFH+LA+ + Q + + + I E Sbjct: 80 TEMKERIGNEVGEARAKKIMIGTFHSLAVRWLHQYYSEAGLKKNWTIFDSEDTNKVIKEL 139 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 K N D ++ SR+ + M + Sbjct: 140 LK-------------------------SNNMDDSKQNVYATQSRISNLKNDMIL------ 168 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGR 426 P++ R + K A + + ++ + NAVDF LI + +++LE + + Sbjct: 169 ------PKDFRKQMEPQDKSFARIYERYQDRMARNNAVDFDDLIMKMVILLESNTEVRRK 222 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 F +K+I+ DE+QD + + ++ + + +F VGDD+Q IY + GA + F Sbjct: 223 FQRRYKYIMCDEYQDTNECQYRMIKNIV--GDKNNIFVVGDDYQGIYGWRGANIEKILNF 280 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL---DE 543 +++ + L+ YR + I N ++ N Q+ K + +K DE Sbjct: 281 QKDYPGTKVVKLEQNYRSTNTIVTAGNAIMKHNTKQMNKTCFTDKGMGEKIRKYEAPDDE 340 Query: 544 SQLDALLDKLSGY----AKPEERILILARYHHMRPASLEKAATRWP 585 + + ++ E I +L R + ++ LE R Sbjct: 341 QEARFIAQEIQNLCTFDGYKYEDIALLYRTN-VQSRLLEDQFIRHN 385 Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 69/183 (37%), Gaps = 31/183 (16%) Query: 504 FNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERI 563 + I ++ I + ++K + D + + + E A + + Sbjct: 489 SDQPITDM-LELIFKYTQYIEKLQETGKEEDFRRIDNIKELTKIAKGYEQENKDPHLQDF 547 Query: 564 LILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARE 623 L + A + + ++ MT+H SKG + V ++G++EG FP + Sbjct: 548 L-------DQIALQSQQDKVVNQDKVQLMTLHTSKGLEYPVVFMIGMEEGL--FPHSR-- 596 Query: 624 SIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWA-----------LFNKENPSPFVEI 672 + EERRL YV +TRA+ ++ +N + PS F+E Sbjct: 597 --------SLSDTVQLEEERRLAYVGITRAQEILYFTHAERRMDYNRTYNWQTPSRFMEE 648 Query: 673 LKN 675 L + Sbjct: 649 LPD 651 >UniRef50_Q67LG5 ATP-dependent DNA helicase n=1 Tax=Symbiobacterium thermophilum RepID=Q67LG5_SYMTH Length = 671 Score = 317 bits (813), Expect = 7e-85, Method: Composition-based stats. Identities = 101/400 (25%), Positives = 162/400 (40%), Gaps = 31/400 (7%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNPAQ A ++ + LLV+AGAG+GKT R LLARG PE ++ + F KAA Sbjct: 10 GLNPAQRAAALHQDGPLLVIAGAGAGKTRTATHRLACLLARG-VPPEAVMCITFTNKAAR 68 Query: 256 EMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM +R + + RTFH+ A+ +++Q P + + T A + +A ++ Sbjct: 69 EMRDRAVALVGADARRVMIRTFHSAAMVLLRQYIGDFPESGRTPSFTVADPTIQLALLKE 128 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 +E+ K R PE W + + LA SL+ Sbjct: 129 AIAERNFDLKANR-----------PESFLWRIGRYKNELADP----ESLLARQPSHDLMD 173 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRF-----I 428 + E IR +L A + K ++ L+ + VDF LI+ + +L + Sbjct: 174 WSRVLEMIRSTDRYVNRLTAEIWKRYEEKLRRNDMVDFDDLINLFVQMLREKPDIRADLQ 233 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 + ++ VDEFQD + + ++ L + + AVGDD Q+IY + A + F Sbjct: 234 RRFTYLQVDEFQDTNVAQLHMVKLLA--GKRQNVMAVGDDAQSIYSWRSADIRCILEFER 291 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDE---SQ 545 +F L+ YR I ANR I N GQ K L + + V E + Sbjct: 292 HFPGARTILLEQNYRSTGAIIRAANRLIAHNAGQRPKRLFTAAPEGRPVVAHEAETEVDE 351 Query: 546 LDALLDKLSGY---AKPEERILILARYHHMRPASLEKAAT 582 ++ ++ + IL R E+ Sbjct: 352 AKWVVQRIRAGAEAGRRWGDFAILYRTTAQGRPFEEELRE 391 Score = 82.0 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 23/107 (21%) Query: 576 SLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVE 635 LE + TIH++KG + V +VG+++G + A E +E Sbjct: 561 LLEGQEDESGGDVVKLQTIHSAKGLEYPVVFVVGMEQGLLPYQRALEEGNLE-------- 612 Query: 636 DFPDAEERRLMYVALTRARHRVWALFNK----------ENPSPFVEI 672 EERRL YVA+TRAR ++ + PS F+ Sbjct: 613 -----EERRLCYVAITRAREELYLTGARVRWQRGEMVLTTPSQFLSE 654 >UniRef50_Q2BNY9 Helicase IV n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNY9_9GAMM Length = 952 Score = 317 bits (813), Expect = 7e-85, Method: Composition-based stats. Identities = 134/386 (34%), Positives = 219/386 (56%), Gaps = 11/386 (2%) Query: 304 HELFIAEWRKQCSEKKAQAKGWRQWLTEEMQW-SVPEGNFWDDEKLQRRLASRLDRWVSL 362 + I + + E + A + + +++ +P + + + + + +L Sbjct: 443 ETVLIETYHHEQVEGELLANLETKLALQGVKFNPLPADSMLNTLREFGAVTNFSSLLSAL 502 Query: 363 MRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVIL 422 ++ A + + A ++ +L+ P+++ ++ L +DF +IH+AI + Sbjct: 503 LKQFKSAGSCLEALKNKKESPQLVAAAELLEPIIRRYEDHLAGNREIDFEDMIHKAISYV 562 Query: 423 EKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 E GRF S WK ILVDEFQDIS RA L+ LR T++F VGDDWQAIYRF+G+ + L Sbjct: 563 EDGRFKSHWKFILVDEFQDISFPRAELVKKLRDSRKNTSIFCVGDDWQAIYRFTGSDVGL 622 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD 542 TT F + FG + LD T+RFN++IG+VA+RF+ +NP Q+KK ++S + D+ +V+L+ Sbjct: 623 TTGFDQMFGATKTISLDKTFRFNNKIGDVASRFVMKNPSQVKKEMHSHLHVDQPSVSLIR 682 Query: 543 ES--------QLDALLDKLSGYAKPEERILILARYHH--MRPASLEKAATRWPKLQIDFM 592 ++ + ++L ++S AKP + +LARYH + L + +P L+I + Sbjct: 683 KNIISDDYYGHVVSVLTRISETAKPGATVYVLARYHFKLFESSQLRHIRSMFPNLEISQL 742 Query: 593 TIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTR 652 + HASKG++AD+VIIVGL G GFP+ + E LLP E++P+AEERRL YVA+TR Sbjct: 743 SFHASKGKEADFVIIVGLDNGKHGFPSKKLTHPLIEELLPKAEEYPEAEERRLFYVAITR 802 Query: 653 ARHRVWALFNKENPSPFVEILKNLDV 678 A+HR + + + S FV+ L Sbjct: 803 AKHRCYLIADMTKASSFVKELVKDKY 828 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 83/363 (22%), Positives = 142/363 (39%), Gaps = 16/363 (4%) Query: 1 MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLAI-HCKRGLVWGELEF 59 + +K L K + P I GI ++ L+ ++ L + C G + LE Sbjct: 4 LTVKPGFLSKLFGKQP-QEIEITVDGIFLTNRGERELVTWDLLSDVPKCSNGWFFSSLEV 62 Query: 60 VLPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENKW 119 E+ +R ET + H+ + S +Q L+ I + + + Sbjct: 63 ---GEETIRF--LPKSETGKLVQQAFQHFYYFH-------STTAKQALNRINEKLSKVHY 110 Query: 120 LTREQTSGVQQQIRQALSALPLPV--NRLEEFDNCREAWRKCQAWLKDIESARLQHNQAY 177 + + AL LP + + + + W + Y Sbjct: 111 IRTSHVEKISAFASSALGKTKLPDTDSYNALPSDLIALYGTLRNWSSRNPAFIDSLRNRY 170 Query: 178 TEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARG 237 E L E+ F ++ES+PL Q A + E + LVLAGAG+GKTS ++ + +L+ Sbjct: 171 IEQQLAEHGTLFDKIESNPLTDKQRLACITDEDNNLVLAGAGTGKTSTMIGKTAYLIESK 230 Query: 238 EASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLE 297 +A +ILLLA+G KAA EM ERI+E+L ++ A TFH L II + P +S L Sbjct: 231 QAVGHEILLLAYGNKAAAEMRERIQEKLGVSNVAAYTFHVLGQKIISDVEGEKPSISPLA 290 Query: 298 NDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLD 357 D + S+ K + + + + P + + A+ + Sbjct: 291 TDEKLFTSYVDQWFSSLLSDTKYKELVLQYFEQYLFPEANPFEFETQGDYYEYIRANEIR 350 Query: 358 RWV 360 + Sbjct: 351 TFK 353 >UniRef50_B0TWY9 DNA helicase II n=19 Tax=Francisella RepID=B0TWY9_FRAP2 Length = 742 Score = 317 bits (812), Expect = 9e-85, Method: Composition-based stats. Identities = 89/394 (22%), Positives = 158/394 (40%), Gaps = 59/394 (14%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 S LNP Q +A + + + L+LAGAGSGKT VL +R +L S E IL + F KAA Sbjct: 8 SGLNPQQKKATLLEDRNSLILAGAGSGKTKVLTSRIAYLCRDKGVSVENILAVTFTNKAA 67 Query: 255 EEMDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 +E+ R+ + L + TFH +A ++++ + ++ + I + Sbjct: 68 KEIQHRVEKMLGISTFGMWIGTFHGIAHRLLRKHAHELGLDKNFRILDQDEQAQLIKKVI 127 Query: 313 K--QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 K +KK K + ++ ++ +V + Sbjct: 128 KSLDLDDKKYPPKLLQNFINKQKDKAVRSNKLTKQYDIN--------------------- 166 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KG 425 + A++ L +NA+DF+ L+ + + Sbjct: 167 ---------------------YTHIYTAYEERLLLDNALDFADLLLYLYELFSLNQQLRE 205 Query: 426 RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 + S +++IL+DEFQD + + L L N+ + AVGDD Q+IY + GA + Sbjct: 206 YYQSLFRYILIDEFQDTNQVQYMWLKLLVTDNNY--MMAVGDDDQSIYGWRGAVVDNIHK 263 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL---D 542 + + + E L+ YR I +VAN I+ N ++ K L S +K + Sbjct: 264 YVADLNDVEIIKLEQNYRSTKNILKVANSVIKNNDNRMSKELWSAAEDGEKVEVYCAVNE 323 Query: 543 ESQLDALLDKLSGY---AKPEERILILARYHHMR 573 + ++DK+ I IL R +++ Sbjct: 324 RDEAKYIIDKIRQLHDGGVDYSDIAILYRSNYLS 357 Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 56/180 (31%), Gaps = 19/180 (10%) Query: 506 SRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILI 565 + + +K + N + D LLD + + + Sbjct: 479 ETVINESGLLASYQEKDTEKDRQKIDNLKELISAAKDFEPQIELLDDNTDILQDFLSFAV 538 Query: 566 LARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESI 625 L + + MTIHASKG + YV +V +EG + Sbjct: 539 L---------EAGEMQADENTDSVQLMTIHASKGLEFRYVFLVAAEEGVFPPSSIINAEE 589 Query: 626 MEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKN 675 + AEERRL YVA+TRA + + + S F+ + + Sbjct: 590 AYTSSESKKIQEKLAEERRLFYVAVTRAMKALTISYAQVRNIFGRSSFQVKSRFLMEIDS 649 >UniRef50_C0R2D4 ATP-dependent DNA helicase n=4 Tax=Brachyspira RepID=C0R2D4_BRAHW Length = 659 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 91/403 (22%), Positives = 161/403 (39%), Gaps = 59/403 (14%) Query: 201 QARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDER 260 Q +++ LL+LAGAGSGKT V+ + +L+ E +PE I+ + F KAA EM ER Sbjct: 11 QREGILHTGSPLLLLAGAGSGKTLVITRKIAYLINELEVAPENIMAVTFTNKAAHEMKER 70 Query: 261 IRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSE 317 + L + RTFH+ L I+++ + + S I K+ Sbjct: 71 VCSLLPDIKPSRLFIRTFHSACLRILKENAHFLGYKSNFLILDEGDKASVIKRIMKEEEV 130 Query: 318 KKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASA 377 K+ + ++ + +G +D + Sbjct: 131 PKSIGQKIITRFISNVKNGMDDGIVFDRD------------------------------- 159 Query: 378 PEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRFISPWK 432 + + K + EN +DF LI I + E+ + + +K Sbjct: 160 -------------IFENVYKKYTEYEFNENVMDFDDLILNTIKLFEQENKVLNYYRNRFK 206 Query: 433 HILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGE 492 +ILVDEFQD +PQ+ L+ L Q+++ L VGDD Q+IY F GA + F +++ Sbjct: 207 YILVDEFQDTNPQQYKLIKLLT-QDAENDLTVVGDDDQSIYAFRGADVLNILDFEKDYPN 265 Query: 493 GERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKA---VTLLDESQLDAL 549 + L+ YR I E A I+ N + +K + S + K + D + ++ Sbjct: 266 TKIVRLEENYRCPKDIVEAALSVIKNNSNRHEKNVFSNKPNEFKIENWICYSDLEEARSV 325 Query: 550 LDKLSGY---AKPEERILILARYHHMRPASLEKAATRWPKLQI 589 ++++ I++L R + A ++ +I Sbjct: 326 VNEIESLFDNGFEARDIVVLFRTNSQSRAYEKELRLHSINYKI 368 Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 38/160 (23%), Positives = 60/160 (37%), Gaps = 29/160 (18%) Query: 527 LNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEER---ILILARYHHMRPASLEKAATR 583 S+ GD + E + L Y E I L R + Sbjct: 488 YFSIFKGDGNERVITAEENIKELFRGFYDYKSMEANATLITFLEENTLYRDLNTNDEKED 547 Query: 584 WPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEER 643 + + MTIH +KG + D V + G+++G FP E+ EER Sbjct: 548 Y----VTLMTIHNAKGLEFDVVFMTGMEQGV--FPHY----------FSLEEEKGIDEER 591 Query: 644 RLMYVALTRARHRVWALFNKEN----------PSPFVEIL 673 RL YV +TRAR +++ ++K+ PS F+ + Sbjct: 592 RLCYVGITRARRKLYLTYSKKRRVSTGIMEQIPSSFLLEI 631 >UniRef50_C9RMS6 UvrD/REP helicase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RMS6_FIBSS Length = 744 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 130/515 (25%), Positives = 191/515 (37%), Gaps = 96/515 (18%) Query: 196 PLNPAQARAVVNG---EHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 LN Q AV++ LL+LAGAGSGKTSVL R + + G PE+IL L F K Sbjct: 9 GLNSDQRAAVLHDHEKNGQLLILAGAGSGKTSVLTKRIQYRIMSG-VEPEKILALTFTAK 67 Query: 253 AAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 AA EM ER+++ + TFH+LAL +++ KVP+ A E Sbjct: 68 AAAEMRERVQKLFPNAGVRLCTFHSLALFVLK---SKVPVGYDEACAAGACSSCPAYELV 124 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 + ++ E + + F +E ++L + + +R + Sbjct: 125 GFKKMPVPTESADKTFMQELAKVGGRKFRFSREELFSDAHPAKLLKKLEPLRHRILESGQ 184 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----F 427 ++ F LI+QAI +LE F Sbjct: 185 VV------------------------------------FEDLIYQAINLLENHESARAYF 208 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + W ILVDE+QDI+P + L+ AL + + +LF VGDD QAIY F GA + F Sbjct: 209 QNQWTEILVDEYQDINPSQYRLVKALLGE--RKSLFVVGDDDQAIYGFRGADIGNINRFR 266 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLD 547 ++F E L+ YR + I +NR + P L+K L + + E++ Sbjct: 267 DDFKESSLIRLEWNYRSVANILHFSNRIFENKPIHLRKVLRAGNMNGSGGSPIFKENREP 326 Query: 548 ALLDK-----------------LSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ-- 588 + Y + IL RY+ R E + Sbjct: 327 EIWVSEDPVEEMQKIITSIKLLRESYDLQWKNFAILVRYNRQRLYYEEALRDAHLPIAGT 386 Query: 589 ------------------IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEAL 630 I T+HASKG Q V G+ EG + Sbjct: 387 VVSEAGNVEGEGEVLENGIHVETVHASKGLQYAVVYYAGMSEGL---------TPGSCLG 437 Query: 631 LPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN 665 EERRL YV +TRA + L+ K Sbjct: 438 SRKQRQKQLDEERRLFYVGVTRAESFLVLLYCKRR 472 >UniRef50_Q2STJ5 ATP-dependent DNA helicase Rep n=90 Tax=Bacteria RepID=Q2STJ5_BURTA Length = 848 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 97/394 (24%), Positives = 157/394 (39%), Gaps = 63/394 (15%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 + S+ LNPAQ+ AV + LVLAGAGSGKT V+ + L+ P I + F Sbjct: 151 SAIMSAGLNPAQSEAVRYLDGPCLVLAGAGSGKTRVITQKIAHLIEAKGFEPRHIAAVTF 210 Query: 250 GRKAAEEMDERIRERL---------------HTEDITARTFHALALHIIQQGSKKVPIVS 294 KAA EM ER+ + L +T TFH+L + I++Q ++ V + Sbjct: 211 TNKAAAEMRERVGKLLEGKTLTTPGKEGRKVPVNQLTVCTFHSLGVQILRQEAEHVGLKP 270 Query: 295 KLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLAS 354 + +++ + E D+ L R++ + Sbjct: 271 QFSIMD-----------------------------SDDCFGMIQEQIGTTDKGLIRKIQT 301 Query: 355 RLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGL 414 + W + + + E + ++ A + + + L A AVDF L Sbjct: 302 IISLWKN-----------GLVTPEEAMTIAANEDEHQAALVYRNYVATLHAYQAVDFDDL 350 Query: 415 IHQAIVILE-----KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDW 469 I + + R+ + +++L+DE+QD + + LL L + AVGDD Sbjct: 351 IRLPTELFAKNEPVRDRWQNRLRYLLIDEYQDTNACQYELLKLLA--GPRAAFTAVGDDD 408 Query: 470 QAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS 529 QAIY + GA + ++F + L+ YR RI AN I NP +K L S Sbjct: 409 QAIYGWRGATLENLAQLGKDFPKLHVIKLEQNYRSTVRILTAANNVIANNPKLFEKKLWS 468 Query: 530 -LTNGDKKAVTLLDESQLDALLDKLSGYAKPEER 562 GD VT ++ + +A A ER Sbjct: 469 EHGMGDSITVTPCNDEEHEAESVVFRLSAHKFER 502 Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 18/95 (18%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + T+HASKG + +V +VG++EG + + + +D EERRLMYV Sbjct: 732 VRLSTVHASKGLEYPHVFLVGVEEGIMPHSGGSDDGPI--------DDERIEEERRLMYV 783 Query: 649 ALTRARHRVWALFNKEN----------PSPFVEIL 673 A+TRA+ + + K+ S F+ + Sbjct: 784 AITRAQRSLHLNWCKKRKRARETIVCEQSRFIAEM 818 >UniRef50_B2S250 Rep helicase, single-stranded DNA-dependent ATPase n=4 Tax=Treponema RepID=B2S250_TREPS Length = 657 Score = 317 bits (811), Expect = 1e-84, Method: Composition-based stats. Identities = 105/405 (25%), Positives = 153/405 (37%), Gaps = 60/405 (14%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 S LNP Q RAV E LL++AGAGSGKT V+ AR ++L G +IL L F KAA Sbjct: 3 STLNPEQRRAVTTLEGPLLIIAGAGSGKTRVITARIAYMLECGILQ-SRILALTFTNKAA 61 Query: 255 EEMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM ERI+ + T TFHA + I+++ + I E Sbjct: 62 HEMSERIKALTGKPLRNTTVSTFHAFGVTILREHIHVLGWRKNFSIYDENDKRALIREAA 121 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 K+ D + ++ + +L + +A Sbjct: 122 KEVHLLP---------------------EVLDTNCVSTLFSAIKMQRKNLKELQHKERA- 159 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----F 427 L + ALK NAVDF LI I I + + Sbjct: 160 ----------------------LWHEYHTALKLFNAVDFDDLIVLPIQIFSEYPDILASY 197 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 S + +ILVDEFQD S Q+ L+ L Q + VGDD Q+IY + GA +F Sbjct: 198 KSRYHYILVDEFQDTSAQQYRLMKMLATQ----NICVVGDDDQSIYSWRGAHHDNILSFE 253 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLD 547 ++F L+ YR I AN I N + +K L S N K + + + Sbjct: 254 KDFPYATEITLEQNYRSTGTILAAANGVIAHNTQRKEKALWS-GNDSGKPIEIFNPETER 312 Query: 548 ALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFM 592 ++ E+ I A Y L + + ++ F+ Sbjct: 313 DEAIFIANTILAEQ---IRASYSFSSFGVLLRTNSFMRIIEDVFL 354 Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 54/153 (35%), Gaps = 26/153 (16%) Query: 531 TNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQID 590 N L L ++ ++ L Y + + + + Sbjct: 490 KNEHAARFKFLQIEHLVESIEHWEQSSEHGS----LYDYLNRVTLLARDNVQKETEGAVS 545 Query: 591 FMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVAL 650 MTIHASKG + V I G++ G+ + E EERRL YVA+ Sbjct: 546 LMTIHASKGLEFPVVFIAGVEAGTIPHERSIE------------EVHSIEEERRLFYVAI 593 Query: 651 TRARHRVWALFNKEN----------PSPFVEIL 673 TRA+ +++ + SPF++ + Sbjct: 594 TRAKEKLYLTHCRTRKRGGKREERTASPFLDEI 626 >UniRef50_C8PTM7 ATP-dependent DNA helicase PcrA n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PTM7_9SPIO Length = 809 Score = 317 bits (811), Expect = 1e-84, Method: Composition-based stats. Identities = 98/390 (25%), Positives = 151/390 (38%), Gaps = 56/390 (14%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q AV + LL+LAGAGSGKT V+ + WL+A PE IL + F KAA E Sbjct: 11 LNPEQLEAVCHTGSPLLILAGAGSGKTRVITTKIAWLIAEQGVRPESILAVTFTNKAARE 70 Query: 257 MDERIRER-LHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQC 315 M ER R T RTFH+ ++++ ++ + + + Q Sbjct: 71 MAERARVLDERTARSVIRTFHSFGAWMLRRYAEWAGLSPNFTIYDDEDSVTLLMKALPQL 130 Query: 316 SEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIA 375 ++++AQ ++ R + Q MI Sbjct: 131 NKQEAQG-----------------------------FMRKISRAKDYCLLPDSPQLVMIE 161 Query: 376 SAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RFISP 430 APE A + + ++ L+ DF LI + +L++ + + Sbjct: 162 PAPE------------FATIYRTYQQRLRETGNADFGDLIMLPVRLLQEHSAIARQLHNR 209 Query: 431 WKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENF 490 +K ILVDE+QD + + LL L ++ T + VGDD Q+IYRF GA++ F F Sbjct: 210 FKVILVDEYQDSNDAQFRLLRELTGED--TYVCVVGDDDQSIYRFRGAEVQNILTFDRQF 267 Query: 491 GEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL-------DE 543 + L YR I VA + +N G+L K L + + L + Sbjct: 268 PHTKIIRLVRNYRSYEPILRVAGSIVSRNEGRLGKTLIAERGTSGQKPHLYYLPSQDAEA 327 Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMR 573 L+ K IL R + Sbjct: 328 ELCVQLVKKAVRAGGSYSDWAILYRTNAQS 357 Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 35/146 (23%), Positives = 51/146 (34%), Gaps = 24/146 (16%) Query: 549 LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIV 608 L + + + L + A T + +TIH +KG + VII Sbjct: 610 LQELANTASLYPCSAAGLTSFLEHIELDRSLAETDAGADAVQLITIHNTKGLEFRNVIIT 669 Query: 609 GLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN--- 665 GL+ G E + EERRLMYVA TRA+ ++ Sbjct: 670 GLENGIFPRNDTIGEDM--------------EEERRLMYVACTRAKDALYMTSCAARRMY 715 Query: 666 -------PSPFVEILKNLDVPVARKP 684 PS F+ + V VA +P Sbjct: 716 GKLSFMEPSRFLAEIDGDLVDVAGQP 741 >UniRef50_Q0AZZ6 ATP-dependent DNA helicase PcrA n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AZZ6_SYNWW Length = 696 Score = 316 bits (810), Expect = 1e-84, Method: Composition-based stats. Identities = 87/408 (21%), Positives = 153/408 (37%), Gaps = 52/408 (12%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + LN Q AV + + +VLAGAGSGKT VL R L+ +G P +I+ + F KAA Sbjct: 6 ADLNEQQKEAVAHVDGPCMVLAGAGSGKTRVLTRRIVHLVKQG-IPPHRIMAITFTNKAA 64 Query: 255 EEMDERIRERLHT-EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 +EM R+ L +TFH+ I++ +++ + I + Sbjct: 65 QEMRSRVISMLPDFNSQWIQTFHSTCNRILRMDIQELGFDKYFSIIDDTEAKSLIKTLLR 124 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 + ++ + +A+ + + EK A Sbjct: 125 EENDYETKAEELLYIFKQAKN------SLEKPEKYFYSFA-------------------- 158 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RFI 428 + D +R + + LK N +DF LI I + ++ ++ Sbjct: 159 -------VPDFIKERN---CRVFSLYNSRLKNLNVLDFEDLIVLCIRLFQQNPDVLEKYQ 208 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 +++I+VDE+QD + + L ++ +F VGD Q+IY + GA+ F Sbjct: 209 GWFQYIMVDEYQDTNYSQYFWARLLASRHH--NIFVVGDPDQSIYSWRGAEPYNIKRFLG 266 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL-----LDE 543 ++ + L+ YR + I AN I N + +K L + +K V E Sbjct: 267 DYPDSRLIKLEMNYRSSGNILSAANAVICNNEEREEKQLYTQKGQGEKLVHFCAGDSFQE 326 Query: 544 SQLDA--LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 ++ A + L + + + R H A E R I Sbjct: 327 ARFIADEINQLLRSENRHFQDFAVFYRTHAQSRALEEALLYRNIPYHI 374 Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 23/101 (22%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 + MT+H +KG + V I GL+EG FP+ ++ E EERR Sbjct: 544 NSDHVLLMTLHGAKGLEFPVVFITGLEEGV--FPSYRSQTAEE-----------MEEERR 590 Query: 645 LMYVALTRARHRVW-------ALFNKEN---PSPFVEILKN 675 L YV +TRA+ R++ L+ E PS F+ + Sbjct: 591 LCYVGITRAQERLYLSHALSRLLYGYERSNPPSRFLYEIPE 631 >UniRef50_D2MPE9 Putative ATP-dependent helicase PcrA n=1 Tax=Bulleidia extructa W1219 RepID=D2MPE9_9FIRM Length = 710 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 91/395 (23%), Positives = 158/395 (40%), Gaps = 50/395 (12%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 ++ LNP Q AV++ L V+AGAGSGKT VL R +L+ + P +IL + F Sbjct: 2 LDIQSLNPQQKEAVLDEHQYLRVIAGAGSGKTRVLTMRIAYLMEEKKVWPSKILAITFTN 61 Query: 252 KAAEEMDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIA 309 KAA EM+ R+ + E T T H+L + I++Q + + + + Sbjct: 62 KAAREMETRVLSLMKEEVSKPTVCTIHSLCVRILRQEIEAMGYPKSFTILDVEDQKAILK 121 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 E+ K+ S K + + S + Sbjct: 122 EYYKEHSVDKNEIS-----------------------------------FASALSYISNN 146 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK----- 424 + E ++ FS K + + + K A+DF LI + + ++ Sbjct: 147 KTENVSVEEANKIADFSSLEKKKVKIYEYYLHRQKELFALDFDDLILWTVRLFDRFEVVL 206 Query: 425 GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 ++ + +ILVDEFQDI + L+ L +++ +L VGD Q IY + GA + + Sbjct: 207 QKWQQHFHYILVDEFQDIDRIQYQLIKQLTGKDN--SLLVVGDPDQTIYTWRGADVRIIV 264 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL---L 541 F ++F + L YR S I + AN I+ N ++ K L + +K Sbjct: 265 NFEKDFSNTKTILLTQNYRSTSSILKGANSVIKNNKQRVDKELFTDNQSKEKIYHFSAGS 324 Query: 542 DESQLDALLDKLSGY---AKPEERILILARYHHMR 573 DE Q + ++ + +L R +++ Sbjct: 325 DEYQAAWIAQEMKSIRLKTGTYSEMAVLYRANYLS 359 Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 20/97 (20%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + MT+HASKG + D V + L EG FP+ EERRL YV Sbjct: 544 VQLMTVHASKGLEFDTVFVSDLNEGI--FPSERS---------LQEGYHGVEEERRLAYV 592 Query: 649 ALTRARHRVWALFNKEN---------PSPFVEILKNL 676 A TRAR ++ PS F++ +++L Sbjct: 593 AFTRARKHLYLTDAGGYSFMLQRVKTPSRFIDEIEDL 629 >UniRef50_Q0EW02 DNA helicase II n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EW02_9PROT Length = 699 Score = 316 bits (809), Expect = 2e-84, Method: Composition-based stats. Identities = 88/392 (22%), Positives = 153/392 (39%), Gaps = 53/392 (13%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + LNPAQ AV G+ L+LAGAGSGKT ++ R G L++ +P +IL + F KAA Sbjct: 2 ADLNPAQLAAVEAGDGPQLILAGAGSGKTRTIIHRIGHLISARGVAPHRILAVTFTNKAA 61 Query: 255 EEMDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 E+ R+ E + + + TFHA++L ++++ ++ + + A + + Sbjct: 62 AELKSRLSELIGDDGGGVVSGTFHAISLRLLRRYAEALAYPRSFQVIDADDQKALVKRIL 121 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 KQ + R S L W+ + G + Sbjct: 122 KQANIPAD-----------------------------RLHPSFLLGWIEHCKHAGQTAEQ 152 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRF----- 427 A + L ++ L+ +DFS LI ++++ + Sbjct: 153 APAC---------DWNGVDLRGLYSTYQQQLREHERMDFSDLILNCVLLMREHADIAEAL 203 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + HILVDE+QD +P + L L L VGDD Q+IY + GA + F Sbjct: 204 QRRFDHILVDEYQDTNPVQHEWLTLLCA--GHRNLTVVGDDDQSIYGWRGADIRHILEFE 261 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNG---DKKAVTLLDES 544 + L+ YR I ++AN I +N + K L + + V + Sbjct: 262 RIWSGAGTHRLEENYRSTGAILDLANAVISKNEDRHDKSLRATQEQGLLPQWQVCNDEYD 321 Query: 545 QLDALLDKLSGY---AKPEERILILARYHHMR 573 + + +L + + + +L R + Sbjct: 322 EARQIGTQLQAWRDAGYAWQEMAVLYRSNRQS 353 Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 25/113 (22%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 + + M++H +KG + D V++ G++EG A + + AEERR Sbjct: 538 NEESVTLMSLHRAKGLEFDCVVLPGVEEGLLPHQRALDDG-----------EAGIAEERR 586 Query: 645 LMYVALTRARHRVWALFNKEN----------PSPFVEIL----KNLDVPVARK 683 L+YV +TRAR + + PS F++ L D PVA Sbjct: 587 LLYVGITRARRHLKLTTARVRRLFGETHYPLPSRFIKNLPPSMLQQDTPVATA 639 >UniRef50_D1R4U3 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4U3_9CHLA Length = 677 Score = 316 bits (809), Expect = 2e-84, Method: Composition-based stats. Identities = 94/402 (23%), Positives = 162/402 (40%), Gaps = 58/402 (14%) Query: 187 DFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILL 246 DF ++++ LNP+Q AV + +L+LAGAGSGKT VL R +L++ ASP+ IL Sbjct: 4 DFKEELDA--LNPSQRAAVTTTDGRVLILAGAGSGKTKVLTVRMAYLMSIKGASPKSILG 61 Query: 247 LAFGRKAAEEMDERIRERLHT---EDITARTFHALALHIIQQGSKKVPIVSKLENDTAAR 303 L F KAA EM RI + I+ TFH+ + I++ K+ + Sbjct: 62 LTFTNKAAAEMRHRIGAFAAPHIAKQISLCTFHSFCMQILRAEIHKLGYTPQFSLYDEKD 121 Query: 304 HELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLM 363 + I + E +A+ ++ Sbjct: 122 VQRLIGLIARDVLEHEAELPSLASTTA----------------------------VINQA 153 Query: 364 RMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE 423 + G A E+ + E + + + + +L+A NAVDF+ L+ + + E Sbjct: 154 QNKGLASEEICDTGSE-------WHDEFARTIYQRLQASLRAYNAVDFNNLLGLTVQLFE 206 Query: 424 K-----GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGA 478 ++ +++I++DE+QD +P + L + L ++ L VGDD Q+IY + GA Sbjct: 207 NFPDVLEKYQERYRYIMIDEYQDTNPVQYKLASLLSRKYQ--NLCVVGDDDQSIYGWRGA 264 Query: 479 QMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAV 538 ++ +F + L+ YR + I + AN I N + +K L S Sbjct: 265 EVKNIL----DFSDATTIKLEQNYRSTNNILKAANGVISHNQTRYQKVLWSNRGEGDLIE 320 Query: 539 TLL-------DESQLDALLDKLSGYAKPEERILILARYHHMR 573 E+ + + Y I IL R + + Sbjct: 321 VFHAPSDKEEAEAVVYRIAHMREKYQLKWRDIAILYRSNALS 362 Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 23/99 (23%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 K Q++ MT H+SKG + +VG+++ + +E +E EERR Sbjct: 576 QKDQVNLMTFHSSKGLEFKACFLVGIEDHIIPHEKSLKEVGVE-------------EERR 622 Query: 645 LMYVALTRARHRVWALFNKEN----------PSPFVEIL 673 LMYV +TRAR + ++ PS F+ + Sbjct: 623 LMYVGITRARQFLTISMARKRKRMGKEYASKPSRFLHEI 661 >UniRef50_Q6MAS4 Probable ATP-dependent DNA helicase, mutU n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MAS4_PARUW Length = 668 Score = 315 bits (807), Expect = 4e-84, Method: Composition-based stats. Identities = 93/411 (22%), Positives = 156/411 (37%), Gaps = 56/411 (13%) Query: 193 ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 E LNP Q AV +L+LAGAGSGKT VL R +L+ SP IL L F K Sbjct: 4 ELETLNPEQKHAVKLINGRVLILAGAGSGKTRVLTMRMAYLIRYLNVSPRAILGLTFTNK 63 Query: 253 AAEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIA 309 AA EM R+ + + +T TFH + I++Q K+ +K + I Sbjct: 64 AAAEMRHRLANFVDSKLAKQVTLCTFHGFCMQILRQDIAKLGYTTKFSLYDEQDVQRLIN 123 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 + + + + L S + A Sbjct: 124 MIVRDILQHEGE----------------------------------LPSLTSTLNAIRHA 149 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR--- 426 + + I+ EI + + + + + +++A NAVDF L+ + +LE+ Sbjct: 150 KNKGISPENIEISES-KWHNSFVQDVYRRLQASMRAYNAVDFDHLLSLTVELLERFPDVL 208 Query: 427 --FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 + ++++++DE+QD +P + L + L + L VGDD Q+IY + GA + Sbjct: 209 EAYQERFRYMMIDEYQDTNPIQYRLASLLTSKYQ--NLCVVGDDDQSIYGWRGADVKNIL 266 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDES 544 F + L+ YR + I + AN I N + KK L S + Sbjct: 267 EFEK----ATVIKLEQNYRSTNFILKAANAVIDHNQYRHKKKLWSEKGEGHPIEVFHTPN 322 Query: 545 QLDA-------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 +L+ ++ + IL R + + + K Q Sbjct: 323 ELEEAQVVVKRIVKMKESLNLQWKDFAILYRSNALSRQFETALMRQVWKFQ 373 Score = 79.0 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 48/118 (40%), Gaps = 23/118 (19%) Query: 566 LARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESI 625 ++ + + ++ +T H++KG + +VG+++ + +E+ Sbjct: 552 FLGNMYVDNKFNQSTKNNRHEDRVSLLTFHSAKGLEFPVCFLVGMEDHIIPHEKSMKETG 611 Query: 626 MEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKE----------NPSPFVEIL 673 +E EERRLMYVA+TRA+ + ++ PS F+ + Sbjct: 612 IE-------------EERRLMYVAITRAQQHLTISMAQQRKRMGKDMASRPSRFLFEI 656 >UniRef50_B0RZ36 ATP-dependent DNA helicase n=21 Tax=Bacteria RepID=B0RZ36_XANCB Length = 658 Score = 315 bits (806), Expect = 4e-84, Method: Composition-based stats. Identities = 100/416 (24%), Positives = 156/416 (37%), Gaps = 59/416 (14%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 LNP Q+ AV++ E LLVLAGAGSGKT V+V + L+A G ++I + F K+A Sbjct: 2 HGLNPPQSAAVLHCEGPLLVLAGAGSGKTRVIVEKIAHLIAIGRYPAKRIAAITFTNKSA 61 Query: 255 EEMDERIRERL---HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 +EM ER+ +R+ + +T TFHAL L +Q + + I + Sbjct: 62 KEMRERVAKRIRGDGADGLTICTFHALGLKFLQIEHAAAGLKRGFSIFDSDDAAAQIKDL 121 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 +S + G + Sbjct: 122 MHGAKPDA---------------------------------IEDAKNLISRAKNAGMSPE 148 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR----- 426 + +A+A S R K A L + ++ L NAVDF LI + ILE Sbjct: 149 QAMAAAR-------SNREKEAASLYERYQARLTTFNAVDFDDLIRLPVQILEANEEIVMG 201 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + ++LVDE QD + + LL L + VGDD Q+IY + GA Sbjct: 202 WRERIGYLLVDECQDTNDAQYRLLKMLA--GPRGNFTCVGDDDQSIYAWRGANPENLQQM 259 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQL 546 ++ E L+ YR ++R+ AN I NP + K L S D + + + + Sbjct: 260 GRDYPALEIIKLEQNYRCSNRVLRAANALIAHNPHEHLKTLWS-DQADGERIRVWECRDS 318 Query: 547 DALLDKLSGYAK--------PEERILILARYHHMRPASLEKAATRWPKLQIDFMTI 594 + +K++ P IL R + + + T Sbjct: 319 EHEAEKVAAEISFLGTAKQVPWSDFCILFRGNFQSRPLEKALQLLRVPYHLTGGTA 374 Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 23/108 (21%) Query: 576 SLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVE 635 L + Q+ MT+HASKG + YV IVG ++G + E + Sbjct: 529 LLSRNDKDDGGNQVRMMTMHASKGLEFRYVFIVGCEDGVLPHEVSLEEGNL--------- 579 Query: 636 DFPDAEERRLMYVALTRARHRVWALFNK----------ENPSPFVEIL 673 EERRL+YV +TRA+ ++W ++K PS F + + Sbjct: 580 ----QEERRLLYVGITRAKQQLWMSYSKLTRKFGEHVRLKPSRFFDEI 623 >UniRef50_A9M0G6 ATP-dependent DNA helicase n=38 Tax=Betaproteobacteria RepID=A9M0G6_NEIM0 Length = 690 Score = 315 bits (806), Expect = 4e-84, Method: Composition-based stats. Identities = 98/414 (23%), Positives = 165/414 (39%), Gaps = 59/414 (14%) Query: 176 AYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLA 235 ++ A T DF + LNP Q AV LLVLAGAGSGKT V+ + +L+ Sbjct: 2 RHSTASKTAQTDFRQHQNMMKLNPQQLEAVRYLGGPLLVLAGAGSGKTGVITQKIKYLIV 61 Query: 236 RGEASPEQILLLAFGRKAAEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPI 292 P + + F KAA EM ER+ + LH T +T TFH+L + I+++ + + Sbjct: 62 NVGYLPHTVAAITFTNKAAAEMQERVAKMLHKSQTRGLTICTFHSLGMKILREEANHIGY 121 Query: 293 VSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRL 352 + I E + Sbjct: 122 KKNFSILDSTDSAKIIGELLGGTG---------------------------------KEA 148 Query: 353 ASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFS 412 + +SL + +++ +A + + A + +++ L++ AVDF Sbjct: 149 VFKAQHQISLWKNDLKTPEDVVQTAS-------NAWEQQTARVYASYQETLQSYQAVDFD 201 Query: 413 GLIHQAIVILE-----KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGD 467 LI V+L+ + ++ +++LVDE QD + + L+ L ++ AVGD Sbjct: 202 DLIRLPAVLLQQNSEVRNKWQRRLRYLLVDECQDTNTCQFTLMKLLT--GAEGMFTAVGD 259 Query: 468 DWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 D Q+IY + GA M EN+ + + L+ YR +RI ++AN+ I+ NP K L Sbjct: 260 DDQSIYAWRGANMENLRKMQENYPQMKVIKLEQNYRSTARILKIANKVIENNPKLFTKKL 319 Query: 528 NSLTNGDKKAVTLLDESQLDA--------LLDKLSGYAK-PEERILILARYHHM 572 S + + +++ + KL G K +L R H Sbjct: 320 WSKLGEGEPVKVVACQNEQHEADWVVSQIVKQKLIGGDKTQYADFAVLYRGKHQ 373 Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 78/191 (40%), Gaps = 26/191 (13%) Query: 501 TYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPE 560 +YR + GE A FI ++ + + N + KA + + D + + Sbjct: 481 SYRAKAETGE-AGEFINSLLEEIDYENHLMQNEEGKAGEIKWRNVSDLVSWFARKGGEDG 539 Query: 561 ERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAA 620 + I+ LA+ + +L + + T+HA+KG + YV +VG +EG + Sbjct: 540 KNIIELAQTVAL--MTLLEGKDEEETDAVSLSTLHAAKGLEYPYVFLVGCEEGVLPHNDS 597 Query: 621 ARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFV 670 E +E EERRLMYV +TRA+ ++ + PS F+ Sbjct: 598 IEEGNVE-------------EERRLMYVGITRAKRQLTLTHCVKRKKQGTWQFPEPSRFI 644 Query: 671 EILKNLDVPVA 681 + + D+ + Sbjct: 645 DEMPQEDLKIL 655 >UniRef50_D2RA55 UvrD/REP helicase n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2RA55_GARVA Length = 515 Score = 314 bits (805), Expect = 6e-84, Method: Composition-based stats. Identities = 121/533 (22%), Positives = 192/533 (36%), Gaps = 102/533 (19%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 L+ +Q A E + ++A AG+GKT + R + A G+ PE++L + F KAA Sbjct: 26 GLDNSQREAATALEGPVRIIACAGAGKTRTITRRIAYACATGKWDPERVLAVTFSVKAAA 85 Query: 256 EMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQC 315 EM RI + TFH+ AL I+ + W C Sbjct: 86 EMRSRIEALGVSNVGCVSTFHSAALQQIR------------------------SVWNDVC 121 Query: 316 SEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIA 375 S + Q + P +F D LQ R + ++ ++ A + + Sbjct: 122 SAQFPSIMNDSQQIIASALKRYP--DFADMTLLQTR---DILAEINWAKVSLIAPDDYLR 176 Query: 376 SAPEEIR-DLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRFIS 429 R + + +A++ A N +DF+ ++ IL R Sbjct: 177 VCASTHRLPPAGLEPQQFVDIYEAYETEKNAHNCIDFNDILLLCCHILRNFPEAANRIKQ 236 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 I VDE+QD+SP + LL QN + VGD Q IY F+GA +F + Sbjct: 237 SIGWITVDEYQDVSPLQHELLRLWMGQNRD--ICVVGDPAQTIYSFAGANSYYLLSFPQE 294 Query: 490 F-GEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLK----KPLNSLTNGDKKAVTLLDES 544 F G L+T YR RI +ANR + + + K + V D Sbjct: 295 FAPLGADISLNTDYRSTERIVGLANRVLAASAHKKDYVKVKAATKGGVRVSQQVFATDVE 354 Query: 545 QLDALLDKLSGYAKPE----ERILILARYHHM-----------------------RPASL 577 + ++++++ K IL R + + L Sbjct: 355 EALGVVEQIAKLVKSGVAHLGECAILTRTNAQQQVVCKALKAAKLPYRVRKDVGWQRNVL 414 Query: 578 EKAATRWPKL-----------QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIM 626 E A + + + TIHA KG + +V ++G EG F + +S + Sbjct: 415 EDAQSYGSQGISDIFASSNISTVTVSTIHAVKGLEFAHVYVIGCSEGLIPFGSTTDDSAL 474 Query: 627 EEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN---------PSPFV 670 E EERRLMYVA+TRA + + PS F+ Sbjct: 475 E-------------EERRLMYVAITRAEKTLHLSYASRKDSGTGMNRVPSRFL 514 >UniRef50_O31626 Putative ATP-dependent DNA helicase yjcD n=3 Tax=Bacillus RepID=YJCD_BACSU Length = 759 Score = 314 bits (805), Expect = 6e-84, Method: Composition-based stats. Identities = 102/445 (22%), Positives = 168/445 (37%), Gaps = 69/445 (15%) Query: 177 YTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLAR 236 + + F V LN Q +AV E LLVLAGAGSGKT VL ARA ++ Sbjct: 119 FVPKTIEPDTSLFPSV---GLNTDQLKAVTETEGPLLVLAGAGSGKTRVLTARAAHMIEH 175 Query: 237 GEASPEQILLLAFGRKAAEEMDERIRERLH-----TEDITARTFHALALHIIQQGSKKVP 291 PE +LL+ F KA EM ER+ + I TFH+L I+ Sbjct: 176 LGIPPENMLLVTFTTKAVAEMKERMANQYGLQPAKVRRIVTGTFHSLFYKILYHS----- 230 Query: 292 IVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRR 351 + L EW+++ KKA + + ++ + FW + + Sbjct: 231 -----NSAKWNGEHLLKMEWQREQYIKKALYEEGIDEKESPVDQALQQIGFWKNTYVPNE 285 Query: 352 LASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDF 411 D W K + L + ++ K + DF Sbjct: 286 RIPLKDEW-----------------------------EKQVYRLYEHYERQKKEHSQFDF 316 Query: 412 SGLIHQAIVILEK-----GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVG 466 + + + ++ S + +IL+DEFQDI+P + ++ L + L VG Sbjct: 317 DDMASACYELFIERPDLLEQYQSRFTYILIDEFQDINPVQYKIMQMLAS--PEQNLCCVG 374 Query: 467 DDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKP 526 DD Q+IY F G+ S F +++ + L YR I A+ +++N + K Sbjct: 375 DDDQSIYAFRGSNPSFILDFQKDYPGAKTIYLTANYRSTHPIVSSADIVVKKNKNRYAKT 434 Query: 527 LNSLTNGDKKAVTLLDESQLDA-------LLDKLSGYAKPEERILILARYHHMRPASLEK 579 L + + + V + + + +K+ A PE+ +L R + A E+ Sbjct: 435 LEAARDDIQVPVLFYPYDEEEEATMVVSDIKEKIQNGASPED-FAVLYRTNSGGRAIYER 493 Query: 580 AATRWPKLQIDFMTIHASKGQQADY 604 L + A +G Q+ Y Sbjct: 494 -------LHQSSIPYTADRGVQSFY 511 Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 54/126 (42%), Gaps = 21/126 (16%) Query: 565 ILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARES 624 LA HMR A + + MTIH SKG + V ++G +GS + Sbjct: 646 FLAHVDHMRAAEKNRTDEH----GVQLMTIHRSKGLEFKTVYVLGTVDGSIPH-----DF 696 Query: 625 IMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKE------NPSPFVEILKNLDV 678 +E A ++ EERRL+YVA+TRA+ ++ N S F+ L Sbjct: 697 SLETA--RKGDEAALEEERRLLYVAMTRAKQHLYLSCPANRRGKTANRSRFLYPLLQK-- 752 Query: 679 PVARKP 684 AR+P Sbjct: 753 --ARQP 756 >UniRef50_D1J8P0 ATP-dependent helicase n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J8P0_MYCHP Length = 745 Score = 314 bits (805), Expect = 6e-84, Method: Composition-based stats. Identities = 82/398 (20%), Positives = 159/398 (39%), Gaps = 44/398 (11%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 ++ LN Q AV+ E L ++AGAGSGKT VL + +L+ + P +IL L F Sbjct: 2 IDLKDLNEQQKSAVIYNEGPLRIIAGAGSGKTRVLTYKIAYLIQKLGVLPNRILALTFSN 61 Query: 252 KAAEEMDERIRERLHTEDIT-----ARTFHALALHIIQQGSKKVPIVSKLENDTAARHEL 306 KAA EM +R+ L ++ + TFHA+ I+++ + + + Sbjct: 62 KAANEMKQRVFNLLAEDNPSNLSPYISTFHAMCAKILRKEIYNFGYENDFQILDELDQKE 121 Query: 307 FIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMH 366 + + + + + ++ L+ ++ H Sbjct: 122 ILKIVYSELDISPTE---------------FTFSSIISFIQNKKNSIEYLNNSINDNNEH 166 Query: 367 GGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-- 424 ++ + E+I+ + K + + ++ L+ +++DF L+ + + Sbjct: 167 FNEDSDSQETQDEKIKAIKEK-------IYERYQLHLERSHSLDFDDLLVFVYKLFYEPK 219 Query: 425 -----GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQ 479 R+ + +IL+DEFQD S + ++ L ++ L VGD Q IY + A Sbjct: 220 FSFVAERWKKRFDYILIDEFQDTSILQYRIMQKLANEH----LTIVGDPDQTIYSWRNAD 275 Query: 480 MSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVT 539 +++ F +++ L+ YR I AN I N +L+K L + + Sbjct: 276 INIIMNFDKDYPNSVTVKLEENYRSTKTILRAANNLISHNKLRLEKKLFTENEEGENIEF 335 Query: 540 LL---DESQLDALLDKLSGYAKPE---ERILILARYHH 571 DE++ + K+S + + I IL R + Sbjct: 336 YCGFNDEAEARWIATKISELKRNRVQLKNIAILYRTNS 373 Score = 88.6 bits (218), Expect = 7e-16, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 65/178 (36%), Gaps = 17/178 (9%) Query: 505 NSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERIL 564 + I I + NS + K ++L++ ++ + K + Sbjct: 492 TNAIHLTIKELIVNKIKYFDEIKNSEEEYENKI------DNFNSLIEAIAEWEKKNPQGS 545 Query: 565 ILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARES 624 I Y ++ + MT+H SKG + DYV + L E A S Sbjct: 546 I-DEYLQEITLITDRDVEDDAASFVSLMTVHNSKGLEFDYVFVACLAENIFPLKRAISIS 604 Query: 625 IMEEALLPPVEDFPD-----AEERRLMYVALTRARHRVWALFNK-----ENPSPFVEI 672 ++ ++F + EERRL YVA+TRA+ R+ F+ S F+ Sbjct: 605 PQDDFTFLNSKNFKENIEGLEEERRLAYVAMTRAKKRLMLSFSVGRNGINRKSRFLSE 662 >UniRef50_B2V7G3 UvrD/REP helicase n=5 Tax=Aquificales RepID=B2V7G3_SULSY Length = 706 Score = 314 bits (805), Expect = 6e-84, Method: Composition-based stats. Identities = 80/327 (24%), Positives = 132/327 (40%), Gaps = 45/327 (13%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 S LN Q AV++ + LLVLAGAGSGKT V+ + +L+ +IL + F KAA Sbjct: 8 SGLNERQKEAVLHFDSPLLVLAGAGSGKTKVITHKIMYLVKHYGIPLNRILAITFTNKAA 67 Query: 255 EEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 EEM ERI + + + TFH+ A ++ ++ + + I + K Sbjct: 68 EEMKERIEKAIGEKPQWVMTFHSFAAKFLRMEAENIGYDRNFVIYDEEDSKKLIKKVLKD 127 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 + + + K + Sbjct: 128 LNLNEEKFKPDKIKDIISKIKQ-------------------------------------- 149 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RFIS 429 PE+ +++S + + + ++ LK NA DF L+ + + IL R+ + Sbjct: 150 DDNPEDQLEIYSISNSYIKTVFEKYEEELKNSNAFDFDDLLIKTVKILSNHPEVLERWRN 209 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 + +ILVDE+QD + + LL L + T+ VGD Q IY + GA F ++ Sbjct: 210 KFDYILVDEYQDTNRIQHKLLKLLV--GDKHTITVVGDPAQCIYTWRGAHPENILDFEKD 267 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFI 516 F + L+ YR +I + AN I Sbjct: 268 FPGTKIVKLERNYRSTKKILDCANAVI 294 Score = 96.7 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 73/210 (34%), Gaps = 29/210 (13%) Query: 479 QMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAV 538 + +E F + + L E+ ++ K + Sbjct: 433 WIQALKDSYERFNKSVKIKL-------QEYLELMEYVLENAKFSPSKTAKEIVERIGYQE 485 Query: 539 TL--LDESQLDALLDKLSGYAKPEERILILARY---HHMRPASLEKAATRWPKLQIDFMT 593 L E + ++ ++ E + A ++ T + + MT Sbjct: 486 YLQKEYEKDWEDRVENINELIIALEEAEKEGKTLDQFFEESALMQAQDTIDNQNKAKIMT 545 Query: 594 IHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRA 653 +H +KG + D V + GL+EG FP+ + EERRL YVA+TRA Sbjct: 546 VHGAKGLEFDTVFVAGLEEGI--FPSGRAFD----------DPTQLEEERRLFYVAITRA 593 Query: 654 RHRVWALFNKENPSPFVEILKNLDVPVARK 683 +++++ + KE S N VP R Sbjct: 594 KNKLYLTYAKERKS-----YGNKSVPTKRS 618 >UniRef50_C9M511 ATP-dependent DNA helicase PcrA n=2 Tax=Synergistaceae RepID=C9M511_9BACT Length = 673 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 98/408 (24%), Positives = 156/408 (38%), Gaps = 51/408 (12%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 LN AQ AVV L+LAGAGSGKT VL + WL+ P +IL + F KAA Sbjct: 26 KGLNDAQKEAVVYLGKRQLILAGAGSGKTRVLTRKIAWLIDAQRVKPWRILAVTFTNKAA 85 Query: 255 EEMDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM +R+ L + RTFH+ L ++ + ++ + + + + Sbjct: 86 REMLDRLTASLGENLAGLQVRTFHSFGLQMLFRSRAQLEQLGYP-------PQCVVYDRA 138 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 S KA + N ++ + + + + G Sbjct: 139 DSLSAAKAVLEAL---------------NLDPEQYTPAWVLETISKAKNSGAGLGAFDNS 183 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRF 427 + S ++ PL + + G LK+ A DF LI + +L + R Sbjct: 184 PMKS--------------IVGPLYERYDGLLKSRGAWDFDDLIALPLELLTRFPEVKERE 229 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 +LVDE+QD++ + L+ L L AVGD Q+IY + GA MS+ F Sbjct: 230 QKALDWVLVDEYQDVNAAQYRLMRLLASGG--ANLTAVGDPDQSIYGWRGADMSMIMNFE 287 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKA-----VTLLD 542 +F L+ YR I E AN I N + +K L + K T D Sbjct: 288 RDFPGASVMLLEQNYRSTGGILEAANSLISHNFDRREKNLWTDREQGAKPQVWNCPTSDD 347 Query: 543 ESQL-DALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 E++L +++ + IL R + + E + Q+ Sbjct: 348 EAELITTEIERFLSSGYRASDVAILYRMNALSRRIEESLLSHNLPYQV 395 Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 34/129 (26%), Positives = 51/129 (39%), Gaps = 28/129 (21%) Query: 562 RILILARYHHMRPASLEKAATRWPKLQ------IDFMTIHASKGQQADYVIIVGLQEGSD 615 IL LA P L +AA + I+ T+H +KG + V ++GL+EG Sbjct: 530 EILSLAGDGDSLPELLAQAALYTDADRDSGGQGINLSTLHGAKGLEFPLVFMIGLEEGI- 588 Query: 616 GFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWAL----------FNKEN 665 FP + + EERRL YV +TRA+ R+ + Sbjct: 589 -FPHSRSSD----------DPAEIEEERRLCYVGMTRAQERLILTRVRERRLFGSTTTQR 637 Query: 666 PSPFVEILK 674 PS F+ + Sbjct: 638 PSRFLAEIA 646 >UniRef50_B9KCT9 ATP-dependent DNA helicase n=1 Tax=Campylobacter lari RM2100 RepID=B9KCT9_CAMLR Length = 687 Score = 313 bits (802), Expect = 1e-83, Method: Composition-based stats. Identities = 93/391 (23%), Positives = 158/391 (40%), Gaps = 49/391 (12%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN +Q A+++ + ++L+LAGAGSGKT + AR +L+ + L L F KAA Sbjct: 6 GLNDSQKEAIMHIDGAMLILAGAGSGKTKTITARLAYLIDHIGVPAQNTLTLTFTNKAAN 65 Query: 256 EMDERIRERLHTEDI---TARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 M R L +++ TFH L ++ S+++ + + + + Sbjct: 66 VMKTRALALLQDQNLHNPLLCTFHKFGLLFLRLYSERINRANNFVIIDTDDKKKILKDLA 125 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 E LQ LAS + ++S + + A+ Sbjct: 126 S--------------------------------ENLQSSLAS-IGAYISNFKNQSKS-AQ 151 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFI---- 428 I E ++D +K + + L + ++ L N +DF L+ ILE F Sbjct: 152 EIRKELEFLKDEKNKNYEEIIHLYEQYEHFLIQNNFMDFDDLLMLTNKILEDEAFAKEQS 211 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 + +I VDE+QD + + +L L S + VGDD Q+IY + GA++ F E Sbjct: 212 QKYTYITVDEYQDTNALQYQILKKLCA--SHENICVVGDDDQSIYGWRGAKIENILNFKE 269 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDA 548 F + L+ YR S I + AN I+ N +L K L + ++ L ++ + Sbjct: 270 QFNNVKLVKLEQNYRSTSAILQAANELIEHNRKRLGKTLICTKDEGEEITILQNDDEKIE 329 Query: 549 ------LLDKLSGYAKPEERILILARYHHMR 573 + KL I IL R + + Sbjct: 330 SFKVAREVSKLLNSGINPSEIAILYRVNALS 360 Score = 88.6 bits (218), Expect = 7e-16, Method: Composition-based stats. Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 18/85 (21%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 K I M+IHASKG + DYV I+GL+EG E EERR Sbjct: 540 DKESICIMSIHASKGLEFDYVFIIGLEEGFFPL---------------TSESSNIEEERR 584 Query: 645 LMYVALTRARHRVWALFNKENPSPF 669 L YVA+TRA+ +++ + S F Sbjct: 585 LAYVAITRAKKKLYLSYAN---SRF 606 >UniRef50_B1XW04 UvrD/REP helicase n=41 Tax=Bacteria RepID=B1XW04_POLNS Length = 788 Score = 313 bits (802), Expect = 1e-83, Method: Composition-based stats. Identities = 104/418 (24%), Positives = 171/418 (40%), Gaps = 73/418 (17%) Query: 185 YADFFRQVESSPLNPAQARAVVNGE-------HSLLVLAGAGSGKTSVLVARAGWLLARG 237 Y+D LNP Q AV S L+LAGAG GKT VL R WL+ G Sbjct: 2 YSDLLAN-----LNPEQREAVTLPPVNENGQSQSALILAGAGGGKTRVLTTRIAWLIQTG 56 Query: 238 EASPEQILLLAFGRKAAEEMDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSK 295 + SP +L + F KAA+EM R+ L +T + TFH L +++ K+ + S Sbjct: 57 QVSPIGVLAVTFTNKAAKEMMLRLSAMLPINTRGMWIGTFHGLCNRLLRAHHKEAGLPST 116 Query: 296 LENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASR 355 + I + + Q S K KG + DDEK A + Sbjct: 117 FQ----------ILDTQDQLSAIKRLLKGLK----------------VDDEKYP---AKQ 147 Query: 356 LDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLI 415 L +++ + G ++ + + MA L A+ + E VDF+ L+ Sbjct: 148 LQYFIAHAKERGQRAKDLSVGDDFQAK---------MAQLYAAYDEQCQREGVVDFAELL 198 Query: 416 HQAIVILE-----KGRFISPWKHILVDEFQDISPQRAALLAALRKQN---------SQTT 461 ++ +L+ + + ++HIL+DEFQD + + A L L + ++ Sbjct: 199 LRSYELLKHSEAIRTHYQERFRHILIDEFQDTNALQYAWLKLLSGHDASSINVSGMGSSS 258 Query: 462 LFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPG 521 +FAVGDD Q+IY F GA + + + + L+ YR + I + AN I N Sbjct: 259 VFAVGDDDQSIYAFRGADVENMRLYEKQY-HPLMVKLEQNYRSHGHILDTANHLIANNSE 317 Query: 522 QLKKPLNSLTNGDKKAVTL---LDESQLDALLDKLS---GYAKPEERILILARYHHMR 573 +L K L + + + D ++ L+D++ + +L R + Sbjct: 318 RLGKNLRTDADHGEPVRIYEAPSDHAEAAWLVDEIKALVNSGIKRTEVALLYRSNAQS 375 Score = 93.2 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 22/128 (17%) Query: 562 RILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAA 621 + LA + + + + MT+H++KG + V I GL+EG + Sbjct: 551 EVSPLAAFLSHASLEAGDNQAQAGQDAVQLMTVHSAKGLEFTSVFITGLEEGLFPHENSV 610 Query: 622 RESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVE 671 E E EERRLMYVA+TRA+ R++ + PS F+E Sbjct: 611 NEQNGLE------------EERRLMYVAITRAKERLYLSHTQSRMLHGQVRYNMPSRFLE 658 Query: 672 ILKNLDVP 679 L + + Sbjct: 659 ELPSDSLK 666 >UniRef50_Q6XYV7 ATP-dependent DNA helicase n=2 Tax=Spiroplasma RepID=Q6XYV7_SPIKU Length = 729 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 86/392 (21%), Positives = 154/392 (39%), Gaps = 53/392 (13%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNP Q AV+ + ++AGAGSGKT V+ + +L+ P +I + F KA Sbjct: 8 SLNPNQREAVLRITGPVRIIAGAGSGKTRVITNKIAYLIKYANLQPWRICAVTFTNKATN 67 Query: 256 EMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM RI E + + T+HAL + I+++ + A + I Sbjct: 68 EMRTRIVEMIGNSGQRCMIATYHALCVRILREDIIHLNYDRYFNIIDMADQDSIIRN--- 124 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 + +RL + D + M + ++ + Sbjct: 125 ----------------------------------IYKRLPMKYDAQEAKMVKNFISKLKN 150 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RFI 428 +P + + A + ++ L+ N+VDF+ LI + + ++ Sbjct: 151 DFISPNSAKTSVNGDEMRWAEVYDTYEKRLREINSVDFNDLILLTYKLFKNNGEVLKKWQ 210 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 + + + LVDEFQD + + ++ L NS + VGD Q IY + GA+++L F + Sbjct: 211 NRFDYFLVDEFQDTNELQFDIIKWLVGDNS--NITIVGDPDQTIYSWRGAKINLILNFDK 268 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL-----DE 543 F + L+ YR I +AN I N +++K L ++ + + DE Sbjct: 269 YFPHTQTIVLNENYRSTQSILSLANNLIIHNKNRIEKNLFTIKASGQLPILYHGANSSDE 328 Query: 544 SQLDA--LLDKLSGYAKPEERILILARYHHMR 573 S A + + ILIL R +++ Sbjct: 329 SDFVARKIKTLIKEENYDYNDILILYRANYLS 360 Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 24/143 (16%) Query: 549 LLDKLSGYAKPEERILILARYH----HMRPASLEKAATRWPKLQIDFMTIHASKGQQADY 604 +L+ ++ K +++ LA +++ SL+ + I MTIH +KG + Sbjct: 503 ILELIASIGKFDQQNKELAGTELLSEYLQLISLQTDSDNLTDNTISLMTIHNAKGLEKKV 562 Query: 605 VIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALF--- 661 V IVGL EG FP + EERR +YVA+TR+ ++ + Sbjct: 563 VFIVGLNEGI--FPTTQA---------IKMGTEQLEEERRALYVAITRSEELLFISYADG 611 Query: 662 ------NKENPSPFVEILKNLDV 678 N+ S F++ L N Sbjct: 612 YSYITGNERFESRFIKELDNDFY 634 >UniRef50_Q256I8 DNA/RNA helicase n=17 Tax=Chlamydiales RepID=Q256I8_CHLFF Length = 636 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 96/403 (23%), Positives = 161/403 (39%), Gaps = 60/403 (14%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN AQ AV +LVLAGAG+GKT V+ R L+ G +P +IL + F KAA+E Sbjct: 6 LNEAQIAAVTAPLSPVLVLAGAGAGKTRVVTCRILHLIKEG-IAPREILAVTFTNKAAKE 64 Query: 257 MDERIR----ERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 + ERI + + TFH+L + I+++ + + + + + + Sbjct: 65 LKERILHQCPQVSGADIPMVCTFHSLGVFILRRSIQALNRENNFIIYDQSDTDKLL---- 120 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 KQC +K L++ L+S + +S + + Sbjct: 121 KQCLQKFN---------------------------LKKTLSSSIQYHISQAKNRLLYPED 153 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRF 427 + PEE D + + K ++ LK NA+DF L+ + + + K + Sbjct: 154 L---DPEEYVDP-------VVSIYKEYQQRLKETNALDFDDLLFLTVKLFKDFPEVKKEY 203 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 WK +L+DE+QD + + + + ++ +FAVGD Q+IY + GA + F Sbjct: 204 SELWKALLIDEYQDTNHAQYMMAQTIAGKHQ--NIFAVGDPDQSIYSWRGANIHNILNFE 261 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL------ 541 +++ + L+ YR I AN IQ N +LKK L S+ +K L Sbjct: 262 QDYPQARVLRLEENYRSYGNILNAANALIQNNASRLKKNLRSVKGPGEKIRVFLGKTDKD 321 Query: 542 -DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATR 583 E + P I R + + R Sbjct: 322 EAEFVASEIYRLHKRSNIPLRDFCIFYRTNFQSRTFEDALLRR 364 Score = 79.3 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 22/96 (22%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 +++ MTIH KG + +VGL+E FP A + E EERRL Y Sbjct: 544 RVNLMTIHNGKGLEFRIAFVVGLEENL--FPHANSKGNYENL----------EEERRLCY 591 Query: 648 VALTRARHRVWALFNKEN----------PSPFVEIL 673 V +TRA+ ++ + PS F++ + Sbjct: 592 VGITRAQDLLYLTAAQTRFLWGTVRVMKPSRFLKEI 627 >UniRef50_Q7UIR9 ATP-dependent DNA helicase n=2 Tax=Planctomycetaceae RepID=Q7UIR9_RHOBA Length = 787 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 84/422 (19%), Positives = 158/422 (37%), Gaps = 60/422 (14%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 + L AQA AV + + LL++AG GSGKT V+ R ++L G P QI L F KA Sbjct: 5 TKDLTAAQAEAVQHIDGPLLIIAGPGSGKTRVVTHRIAYMLQSG-IRPWQIAALTFTNKA 63 Query: 254 AEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 A+EM R+ + + TFH +++ + V + ++ + Sbjct: 64 ADEMRSRVNLLAPNQPVWMGTFHRFCAQQLRRYAPMVGLAENYSIYDSSDSK-------- 115 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 M+ ++ ++AS + + + + Sbjct: 116 -----------------SAMKRAITAAGVSTSHTSPEQIASAISNAKNRLITPEIMAQQT 158 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFIS---- 429 + + A + ++ L NAVDF L+ +L + + Sbjct: 159 GRAGD-----------TVAAKVYPVYQQQLLTANAVDFDDLLFHFARLLRENPEVRSNLD 207 Query: 430 -PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 K+I+VDE+QD + + A++ AL + L GD Q++Y + GA ++ F + Sbjct: 208 EKLKYIMVDEYQDTNLAQYAIVRALSVDHP--NLAVTGDPDQSVYGWRGADLNNILDFEK 265 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD------ 542 ++ + L+ YR I VA++ I+ N + +K L + N +AVTL Sbjct: 266 DYPAVKTVRLEQNYRSTPEILRVADQLIRHNRRRKQKNLFT-DNPTGEAVTLRQYEDGYK 324 Query: 543 --ESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQ 600 + D + +++ I+ R + + + R + G Sbjct: 325 EADGIADEIANQMIAGNAEPRDFAIMCRMNALTRSIEHALRNRG-------IPYQIVNGL 377 Query: 601 QA 602 + Sbjct: 378 EF 379 Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 22/99 (22%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 ++ MT+HA+KG + V I+ +++ + ++ EERR Sbjct: 545 SNNRVTLMTLHAAKGLEFPRVFIIAVEDNLLPHRRSKE------------DETQLEEERR 592 Query: 645 LMYVALTRARHRVWALFNKEN----------PSPFVEIL 673 L++V +TRA + + K PS F+ L Sbjct: 593 LLFVGVTRAEQWLQISYAKLRSFRGENQPAIPSMFLGEL 631 >UniRef50_B2A5W4 UvrD/REP helicase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A5W4_NATTJ Length = 726 Score = 312 bits (799), Expect = 3e-83, Method: Composition-based stats. Identities = 94/386 (24%), Positives = 159/386 (41%), Gaps = 55/386 (14%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV G+ +LVLAGAGSGKT VL R +LL PEQIL L F KAA E Sbjct: 10 LNQEQTAAVTAGDGPVLVLAGAGSGKTKVLTYRIAYLLETKGIHPEQILALTFTNKAAGE 69 Query: 257 MDERIRERLHTEDI-TARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQC 315 M ER++ + + TFHA + I+++ + + + Sbjct: 70 MKERVQTIVEGDAPSWVSTFHAACVRILRREIDLLGYGKDFLIYDTRDKTKIVKDL---- 125 Query: 316 SEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIA 375 + + N + + +A ++ + ++ Sbjct: 126 ---------------------LADFNLDKKKYPHQAVAKKISGVKNNLQ----------- 153 Query: 376 SAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FISP 430 P E+ + + +A++ LK ENA+DF L+ + + E+ + + Sbjct: 154 -DPRELFYPYD-------EVFEAYQKRLKKENALDFDDLLLLTLRLFEQYPDRLQYYQNK 205 Query: 431 WKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENF 490 +++ILVDEFQD +P + L++ L Q +F VGDD Q+IY F GA + F + + Sbjct: 206 FQYILVDEFQDTNPAQNRLISLLSP--PQDNVFVVGDDDQSIYLFRGADVKNILEFEKTY 263 Query: 491 GEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDA-- 548 + L+ YR + I E AN+ + NP + K L + + + + D Sbjct: 264 PNAQVYKLEKNYRSSKTILEAANQVVTNNPSRKSKELWTDNDEGYPLQYYEADDERDEAY 323 Query: 549 -LLDKLSGYAKPEERILILARYHHMR 573 + +++ I +L R + Sbjct: 324 FIAEEIRANRYQLPLIAVLYRTNAQS 349 Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 22/102 (21%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 + Q+ MT+H++KG + V + GL+EG FP + EERR Sbjct: 535 EQAQVVMMTLHSAKGLEFPGVFLTGLEEGV--FPHIRTYDS----------EASMEEERR 582 Query: 645 LMYVALTRARHRVWALFNKE----------NPSPFVEILKNL 676 L YV +TRA ++ + +E PS FV + Sbjct: 583 LCYVGITRAEQVLYLTWARERTLNGMTRMLQPSRFVSEIGED 624 >UniRef50_A5TXQ2 Superfamily I ATP-dependent helicase n=15 Tax=Fusobacterium RepID=A5TXQ2_FUSNP Length = 737 Score = 312 bits (799), Expect = 3e-83, Method: Composition-based stats. Identities = 85/400 (21%), Positives = 154/400 (38%), Gaps = 53/400 (13%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN Q A + S+L+LAGAGSGKT + R ++ SP IL + F KAA+ Sbjct: 8 KLNDKQREAASQIDGSILILAGAGSGKTRTITYRIAHMIENVGISPYSILAVTFTNKAAK 67 Query: 256 EMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM ER+ + + T TFH+ + +++ + +V + + K Sbjct: 68 EMRERVEGLVGDIAKACTISTFHSFGMRLLRMYASEVGYNPNFTIYDTDDQKRIVKAILK 127 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 + +F + +R + S + + ++ Sbjct: 128 GQNI-----------------------SFNGVKLTERDIVSIISKIKEEIKTP------- 157 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK----GRFIS 429 D +S K + + + AL NA+DFS ++ +L+K + + Sbjct: 158 ---------DEYSVINKQIIEVYDKYNKALLESNAMDFSDILLNTYKLLQKPEILEKVQN 208 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 +K+I++DE+QD + + ++ + +++S L VGD+ Q+IY F GA + F N Sbjct: 209 KYKYIMIDEYQDTNNLQYKIIDLIARKSS--NLCVVGDENQSIYGFRGANILNILNFENN 266 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDAL 549 + + L+ YR + I + AN I+ N K L + L ++ D + Sbjct: 267 YNNAKIVKLEENYRSTTTILDAANELIKNNKSSKDKKLWTQNGKGDLIKVLACDNGRDEV 326 Query: 550 LDKLS------GYAKPEERILILARYHHMRPASLEKAATR 583 + P + IL R + E Sbjct: 327 SRIIEFIRENHQNGVPYRDMTILYRTNAQSRIFEEGLLRY 366 Score = 82.0 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 58/148 (39%), Gaps = 25/148 (16%) Query: 542 DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ---IDFMTIHASK 598 D +D+ E ++ R + +AT + + + MTIH SK Sbjct: 496 DAEARIENIDEFKNSILELENVVGELRLNEYLENVSLISATDDLEEKSDYVKLMTIHNSK 555 Query: 599 GQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVW 658 G + V +VG + FP +++ EERRL YVALTRA +++ Sbjct: 556 GLEFPIVFLVGFENEI--FPGTRA----------MLDEKEMEEERRLCYVALTRAEKKLY 603 Query: 659 A-------LFNKEN---PSPFVEILKNL 676 ++ ++ PS F++ + Sbjct: 604 LSHATIRFVYGQDRLSTPSVFLKEIPEK 631 >UniRef50_B2RKD8 ATP-dependent DNA helicase n=5 Tax=Bacteroidetes RepID=B2RKD8_PORG3 Length = 765 Score = 312 bits (798), Expect = 4e-83, Method: Composition-based stats. Identities = 91/403 (22%), Positives = 159/403 (39%), Gaps = 47/403 (11%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 S LN +Q AV+ + LV+AGAGSGKT VLV + L+ G P +++ L F KAA Sbjct: 7 SSLNDSQKAAVLYNDGPALVIAGAGSGKTRVLVYKLLHLIRSG-YDPARLMALTFTNKAA 65 Query: 255 EEMDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 +EM ER+ + I TFH++ I+++ + + Sbjct: 66 KEMKERVASEIGPTAYRIQMGTFHSVFSRILRENAIHLGYTRDFSIYDTNDT-------- 117 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 + L M+ + + +Q R++ ++ +S E Sbjct: 118 -------------KSLLRHVMKRMNIDDKVYRLNAVQHRISMAKNQLIS---------PE 155 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----F 427 A+ + R R+ MA + + K NA+DF L+ + V+ + Sbjct: 156 SYAANKDLSRYDIDCRMPRMAEIYSLYTILCKQNNAMDFDDLLFKINVLFRDFPDVLQTY 215 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 ++L+DE+QD + + + L + + +F VGDD Q+IY F GA++ F Sbjct: 216 RDRIDYLLIDEYQDTNFAQYLIARQLMGEKGK--VFVVGDDAQSIYSFRGAKVENILGFS 273 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAV-------TL 540 ++F + L+ YR I AN I N G++ K + S ++ L Sbjct: 274 KSFPGSKLFKLEENYRSTQSIVNAANSLIAYNEGRIPKQVFSNKQVGERIRLTGCLSGYL 333 Query: 541 LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATR 583 + D+++++ P IL R + E Sbjct: 334 EAYTVADSIVERRMQEYCPYSDFAILYRTNAQSRVFEEALRKH 376 Score = 89.7 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 59/156 (37%), Gaps = 27/156 (17%) Query: 534 DKKAVTLLDESQLDALLDKLSGYAKPEERIL----ILARYHHMRPASLEKAATRWPKLQI 589 DK + + L LL+ + Y L + + ++ + Sbjct: 503 DKSIEGISRQENLKELLNGIEEYGTSYAEERGEKPSLGTFLNEVVLLTDQDTEGVVGDYV 562 Query: 590 DFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVA 649 MT+HA+KG + ++ IVG++E A E +E EERRL YVA Sbjct: 563 TLMTVHAAKGLEFKHIFIVGMEENLFPSMMNATEQGLE-------------EERRLFYVA 609 Query: 650 LTRARHRVWALFNKE----------NPSPFVEILKN 675 +TRA+ F E PS F++ L + Sbjct: 610 ITRAKESCHISFAAERSRNGRTERSRPSRFLQELDD 645 >UniRef50_B0VGK7 Superfamily I DNA and RNA helicases n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VGK7_9BACT Length = 732 Score = 312 bits (798), Expect = 4e-83, Method: Composition-based stats. Identities = 84/397 (21%), Positives = 157/397 (39%), Gaps = 49/397 (12%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 +S LN Q V + E+ +LVLAGAGSGKT L+ R +L+ + P IL++ F Sbjct: 10 NNFYASQLNERQLEVVTDTENPVLVLAGAGSGKTRSLIYRTAYLIKEKQVHPWNILIVTF 69 Query: 250 GRKAAEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 KAA E+ ER+ + L+ + TFHA+ I++ S +P + + Sbjct: 70 TNKAARELQERLEKLLNIPVRSLWVGTFHAICCRILRFESAHLPFNANFSIYDEDTQKSL 129 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 + + K+ F + +R+ R+ + + + Sbjct: 130 LKKIYKEYG-------------------------FDKQSFPINNILTRISRYKNKLMLPE 164 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE---- 423 + + E + + ++ L A+DF ++ +L Sbjct: 165 DIKFQGEDKDSE---------FATFLNIYRLYQQQLLLNQALDFDDILLWTAKLLLNNNT 215 Query: 424 -KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + ++ + ++++++DE+QD + + ++ + + VGDD QAIY F GA + Sbjct: 216 VREKYRAQFQYVMIDEYQDTNKAQFEIVHQIA--GGHQRVCVVGDDDQAIYSFRGASLRN 273 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD 542 F +++ L+ YR I +AN I N + K L S K V + Sbjct: 274 ILEFEKDYNSVHSIRLEQNYRSTGNILALANAVIANNRRRHSKELWSELPVGDKPVLAVY 333 Query: 543 ESQLDA------LLDKLSGYAKPEERILILARYHHMR 573 E++++ + KL P I +L R + Sbjct: 334 ENEIEEANRITDAILKLQRKGIPLREIAVLYRTNAQS 370 Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 44/117 (37%), Gaps = 29/117 (24%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 I MT+H +KG + + V I GL++ E EERR Sbjct: 562 NMDSIRLMTLHNAKGLEFEAVFIAGLEDELLPHRMCMNNQDSIE------------EERR 609 Query: 645 LMYVALTRARHRVWALFNKEN----------PSPFVEILK-------NLDVPVARKP 684 L YV +TRA++ + + K PS F+ + + D +A+ P Sbjct: 610 LFYVGITRAKNYLHLSYTKSRRLYDTFYFPVPSQFLTEVDSRLFYHSDGDFGIAQPP 666 >UniRef50_Q6KHF5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma mobile RepID=Q6KHF5_MYCMO Length = 723 Score = 311 bits (797), Expect = 5e-83, Method: Composition-based stats. Identities = 105/423 (24%), Positives = 174/423 (41%), Gaps = 61/423 (14%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN Q AVV + L ++AGAGSGKT VLV + +L+ + P QIL + F KAA Sbjct: 11 SLNKDQKLAVVFNDSPLRIIAGAGSGKTRVLVHKIAYLIQKMNVKPYQILAVTFTNKAAN 70 Query: 256 EMDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM ERI+ + H + TFHAL ++I+++ + A + Sbjct: 71 EMKERIKTLVDNHESEPLISTFHALCVYILRRDIDVLKYPKNFTILDVADQFDILKNI-- 128 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 +D K+ L S ++ ++S +++ + Sbjct: 129 --------------------------YEKFDINKIDITLTSMIN-YISFHKINKTPIEVL 161 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RFI 428 E RIKL + + LK +DF+ L+ + + EK ++ Sbjct: 162 ETEDNSE-----DDRIKL--KIYLEYNEILKKLALLDFNDLLLKTQELFEKFPEIKLKWS 214 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 +K+ILVDEFQD SP + ++ L + + L VGD Q IY + GA ++L FH+ Sbjct: 215 RRFKYILVDEFQDTSPIQYEIIKTLAQNH---NLTIVGDPDQTIYSWRGANVNLILDFHK 271 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAV---TLLDESQ 545 +F + +L+ YR +I + AN I N +L+K L + T ++ + L E + Sbjct: 272 DFENAKTINLNLNYRSTEKILKHANSLIHFNKKRLEKDLVAYTKQGQEVIFHHALSPELE 331 Query: 546 LDALLDKLSGYAKPEE----RILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQ 601 ++DK+ E+ I I+ R + + H G + Sbjct: 332 ARWVVDKIKWLISIEKAKLSEISIIYRANFYSKNFEDALLRESIH--------HQVHGGE 383 Query: 602 ADY 604 Y Sbjct: 384 KFY 386 Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 19/113 (16%) Query: 571 HMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEAL 630 + + A+ K + M IH KG + YV +VGL E ++AL Sbjct: 533 FEEISLVPNASQEDDKNTVSLMNIHNCKGLEFSYVFLVGLSEEIL---------PSKKAL 583 Query: 631 LPPVEDFPDAEERRLMYVALTRARHRVWALFN----------KENPSPFVEIL 673 +D EERRL YVA+TRA+ ++ + ++ S F+ + Sbjct: 584 ENDFDDSNLEEERRLAYVAITRAKKMLFLTDSDGYLFGNFKTQKKTSRFIGEM 636 >UniRef50_A5IY88 ATP dependent helicase n=2 Tax=Mycoplasma RepID=A5IY88_MYCAP Length = 734 Score = 310 bits (795), Expect = 8e-83, Method: Composition-based stats. Identities = 89/409 (21%), Positives = 167/409 (40%), Gaps = 45/409 (11%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN + A+ + L ++AGAGSGKT VL + +L+ SP+ IL + F KAA Sbjct: 17 SLNEEETEALYYFDGPLRIIAGAGSGKTRVLTRKIAYLINVLGISPDHILAVTFTNKAAS 76 Query: 256 EMDERIRERLHTE----DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 EM ER+++ +T+ TFH+L I+++ + + + + + + + + Sbjct: 77 EMSERVKQYTNTKFNKGTAEISTFHSLCARILREEAFHINLKNDFQIIDDNDKKKILKDI 136 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 K+ + + + L + + Sbjct: 137 YKE-------------------------HDLVPTDSNFKNLTRFFSWLKNKLYASDEEII 171 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----R 426 + I S PE F + + + + LK ++DF L+ + + K + Sbjct: 172 DFINSDPE---SEFYGDGETVVKIYNFYNEQLKHLQSLDFDDLLIKVNELFYKNPEIVKK 228 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + + +ILVDEFQD S + ++ L Q +Q L VGD Q IYR+ GA ++L +F Sbjct: 229 WALKYSYILVDEFQDTSAIQYEIIKYLSSQKAQ--LTIVGDPDQTIYRWRGADVNLILSF 286 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL---DE 543 ++F + L+ YR +I AN I+ N + K L + + + + E Sbjct: 287 EKDFENTKTIILNKNYRSTKKILAAANNLIKYNRNRFNKNLVTDNSDGDEIEYIHAFSPE 346 Query: 544 SQLDALLDKLSGYAKPE---ERILILARYHHMRPASLEKAATRWPKLQI 589 +++ ++ K++ K + + I I R + E+ +I Sbjct: 347 AEVRWVVQKINDLKKQKIQLKNIAIFYRSNSYSRNFEEQLMNEKINYKI 395 Score = 89.4 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 35/140 (25%), Positives = 59/140 (42%), Gaps = 22/140 (15%) Query: 543 ESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQA 602 E + ALL+ + + L Y ++ + MT+HA+KG + Sbjct: 524 EENIRALLEGIKSWEITNPNKG-LKEYFEYISLISASDSSNESMSYVSLMTVHAAKGLEF 582 Query: 603 DYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVW---- 658 D V +VG+ E FP + E EERRL YVA+TRA+ +++ Sbjct: 583 DNVFLVGMCENI--FPNYRAYKVAEAM----------EEERRLAYVAITRAKEKLFVSDS 630 Query: 659 ---ALFNKE--NPSPFVEIL 673 L+++ PS F++ + Sbjct: 631 RGLLLYSQTEKKPSRFLKEM 650 >UniRef50_C0WAB3 ATP-dependent DNA helicase pcrA n=1 Tax=Acidaminococcus sp. D21 RepID=C0WAB3_9FIRM Length = 750 Score = 310 bits (795), Expect = 9e-83, Method: Composition-based stats. Identities = 83/398 (20%), Positives = 153/398 (38%), Gaps = 56/398 (14%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 S LN QA AV + +L+LAGAGSGKT L R +LL +G P IL + F KAA Sbjct: 6 SSLNTQQAEAVKHVAGPILILAGAGSGKTKALTTRIAYLLEKG-VPPYSILAITFTNKAA 64 Query: 255 EEMDERIRERLHT--EDITARTFHALALHIIQQGSKKV---PIVSKLENDTAARHELFIA 309 +EM ER+ + + +D+ TFH ++++ K + + + + Sbjct: 65 KEMRERVDKLVGPLAKDVWLYTFHGFCNQLLRREIKHLSHYGYGTGFSIYDTTDCKNVLK 124 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 K + F+ + +++ + +S Sbjct: 125 GILKDLKMDE---------------------KFYPLSAVMSVISNAKNAQLS-------- 155 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR--- 426 + R K +A + ++ ++ NAVDF L+ ++ +L+ R Sbjct: 156 -------SAAFARKADDFHAKKVAEIYLEYEKRMRQNNAVDFDDLLLLSVDLLQHDRDVR 208 Query: 427 --FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 + ++++++DE+QD + + L + + L AVGD Q+IY + GA +S Sbjct: 209 EKYQHKFQYVMIDEYQDTNHVQYLLAKLISA--PENNLCAVGDIDQSIYGWRGADISNIL 266 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL---- 540 F +++ + + L+ YR I + AN I+ N + K L + K Sbjct: 267 DFEKDYPDAKIYKLEQNYRSTQVILDAANAVIEHNSARRPKNLWTENGNGKPITYFQAFN 326 Query: 541 ---LDESQLDALLDKLSGYAKPEERILILARYHHMRPA 575 E + + + +L R + Sbjct: 327 DRNEAEFTVHNMRRLRDEAHFHLGDMAVLYRTNAQSRM 364 Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 22/95 (23%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + MT+H++KG + V + G++EG FP+ + EERRL YV Sbjct: 554 VTLMTLHSAKGLEFPVVFMAGMEEGL--FPSQRSLD----------DTDKLEEERRLCYV 601 Query: 649 ALTRARHRVWALFNKEN----------PSPFVEIL 673 +TRA+ +++ + PS F+E + Sbjct: 602 GITRAKKKLFLTSCRSRMMYGRTVMFPPSRFLEEI 636 >UniRef50_A5UVF1 ATP-dependent DNA helicase, Rep family n=6 Tax=Chloroflexi (class) RepID=A5UVF1_ROSS1 Length = 659 Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats. Identities = 99/424 (23%), Positives = 170/424 (40%), Gaps = 59/424 (13%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + LNP Q AV +LV AGAGSGKT VL R +L+ SP IL L F KAA Sbjct: 10 ASLNPEQRTAVAAPPGPILVRAGAGSGKTRVLTLRIAYLIVEHGVSPSNILALTFTNKAA 69 Query: 255 EEMDERIRER--LHTEDITARTFHALALHIIQQG-SKKVPIVSKLENDTAARHELFIAEW 311 EM +R+R+ + +TA TFH++ ++++ + ++ + A ++ +A Sbjct: 70 REMRQRLRDMPGVSIRGLTAGTFHSVCASVLREHIAGRIGSYTADFTIYAEDEQVHLASA 129 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 + ++ A + E+L R ++ R ++ A+ Sbjct: 130 ALDAARERPPA-------------------LLEPEELLRHISRAKSRLLTPRLAARFARD 170 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRF---- 427 ++ + +A + ++ +L+ NA+DF LI + + Sbjct: 171 DL---------------ARFVAGCYQRYQRSLERANALDFDDLILLTHRLFSEHPDVLDA 215 Query: 428 -ISPWKHILVDEFQDISPQRAALLAALRK----QNSQTTLFAVGDDWQAIYRFSGAQMSL 482 S W+H+L+DE+QD P + AL+ L + +LFAVGD QAIY F A ++ Sbjct: 216 CQSRWRHVLIDEYQDTDPAQHALVELLTRPSPANGGVRSLFAVGDGMQAIYGFRNADHTI 275 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPG------QLKKPLNSLTNGDKK 536 + F +F + +L T YR I + A I+ + + KP G Sbjct: 276 ISRFERDFPDARVIELATNYRSRQPILDAAYAVIRHSRTVQPMALRATKPETPRGVGYTS 335 Query: 537 AVTLLDESQLDALLDK-------LSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + ++D ++ L + + I +L R HM A + Sbjct: 336 PLQIVDAKDARDEAERVARSIADLLRQGRRPQEIAVLYRSRHMSRAFESALRHARIPYAL 395 Query: 590 DFMT 593 T Sbjct: 396 RGAT 399 Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 19/97 (19%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 + ++ TIHA+KG + V +VGL+EG + + EERR Sbjct: 562 ERDRVQLSTIHAAKGLEWPIVFVVGLEEGVLPHEHSLVTPEGVD------------EERR 609 Query: 645 LMYVALTRARHRVWALFNKEN-------PSPFVEILK 674 L YVALTRA +++ + PS F+ ++ Sbjct: 610 LCYVALTRAGEQLYLSWAASRVRGKLAKPSRFLNDIE 646 >UniRef50_A5WC18 UvrD/REP helicase n=2 Tax=Psychrobacter RepID=A5WC18_PSYWF Length = 742 Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats. Identities = 113/486 (23%), Positives = 188/486 (38%), Gaps = 65/486 (13%) Query: 122 REQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEAM 181 R++ + +QQ I + S L P + + N + + D SA HN + + Sbjct: 21 RQKMAHLQQSIAKLESNLIAPESMDKRLSNTVYDDKVADQKIADKHSA--PHNSVLSSSE 78 Query: 182 LTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASP 241 + D+ + LNP+Q A E +LV+AGAGSGKT L R +L+ G ASP Sbjct: 79 V----DYAGE-----LNPSQLLAATTTEGKVLVIAGAGSGKTKTLTYRTSYLIESG-ASP 128 Query: 242 EQILLLAFGRKAAEEMDERIRERLHT-------------EDITARTFHALALHIIQQGSK 288 ILLL F RKAA E+ R++ L IT+ TFH+ ++++ S Sbjct: 129 SSILLLTFTRKAANEIKGRVKSLLAESLADNRALSGLDLNAITSGTFHSFCNMLLRRYSG 188 Query: 289 KVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKL 348 + I K E C E+ K +Q + Sbjct: 189 LLGINPKFTILDTGDSE---DALDMICKEQGIVRKNMKQAFPRKKT-------------- 231 Query: 349 QRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENA 408 L +S R ++I + +I + I L+ L A+ +A + Sbjct: 232 -------LQNLISTSRNRHILLRDLIENDYPDI----AIHIPLIEDLAMAYHKYKRANHL 280 Query: 409 VDFSGLIHQAIVILEKGR-----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLF 463 DF +I Q + L+ ++H++VDE+QD + + L+ L + + +L Sbjct: 281 YDFDDIISQVVYHLKNNLQFRKLIQDTYRHVMVDEYQDTNIPQKQLIDYLCEPD-NVSLM 339 Query: 464 AVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQL 523 VGDD Q+IY F GA F + + + + L+ YR I + N + Sbjct: 340 VVGDDNQSIYAFRGANYENILLFADGYPDAKLIKLEQNYRSTPAILDYVNALSEHITLGY 399 Query: 524 KKPLNSLTNGDKKAVTLL----DESQLDALLDKLSGYAKPEE--RILILARYHHMRPASL 577 +K L S + + TL D+ + + DK+ + +L+R Sbjct: 400 QKKLFSNLAIEGEKPTLCRRSNDKQEAVYIADKIIELKPEYDFNDFAVLSRTSFQSNEIQ 459 Query: 578 EKAATR 583 + R Sbjct: 460 LQFMQR 465 Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 36/101 (35%), Gaps = 21/101 (20%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 + TIH++KG + V + L +G + E E EER+ Sbjct: 630 QTDAVTISTIHSAKGLEWPVVFVNALVDGLMPHHRSLHEFEALE------------EERK 677 Query: 645 LMYVALTRARHRVWALFNK---------ENPSPFVEILKNL 676 L YVA +RA+ ++ + S F+ + Sbjct: 678 LFYVACSRAKTHLYLTAPDYFSSFAGYFDKISRFISEVATD 718 >UniRef50_C6HUX3 Putative ATP-dependent DNA helicase, UvrD/REP family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUX3_9BACT Length = 796 Score = 310 bits (793), Expect = 1e-82, Method: Composition-based stats. Identities = 93/390 (23%), Positives = 169/390 (43%), Gaps = 50/390 (12%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNP Q AV + E LLVLA AGSGKT V++ R +L+ R E + F RKAA Sbjct: 20 GLNPEQRLAVTHEEGPLLVLAPAGSGKTRVVIERLLFLIERSGRGGESFFVATFTRKAAR 79 Query: 256 EMDERIRERLHTEDIT-ARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 E+ ERI RL + TFH+L+ ++++ + + + A + + E ++ Sbjct: 80 ELVERISHRLPDARLPYVGTFHSLSARLLRRLADRAGLPPDFTVSDAGDQKALVREIMRR 139 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 +++ + + ++ +W + + G Sbjct: 140 -------------------------HKVSEEDVAPQEILRQISQWKNARQTPG------- 167 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFIS----- 429 PE R LF R + MA + ++ L+ ++D+ L+ + + +L ++ Sbjct: 168 ---PELARRLFGSR-RFMATCYEEYEEGLRKNRSLDYDDLLCRLVGLLSSQPDVATALRQ 223 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 + HILVDE+QD +P + L+ L ++ + + VGDD Q+IYRF GA+++ F ++ Sbjct: 224 EFHHILVDEYQDTNPLQEELIRLLSRE--RRNVTVVGDDDQSIYRFRGAEVAHIQRFSDH 281 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL------LDE 543 + R L YR S I + A I++N G+ K + ++ G + + + Sbjct: 282 YPGAGRVLLSRNYRSTSAIVDSATSVIRKNDGRYMKTVTAVRGGGSPVLLMEFPDEEAEA 341 Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMR 573 + +L + R +L R + Sbjct: 342 RGVAGILREWIAGGGRPSRAAVLFRTNAQS 371 Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 25/112 (22%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 ++ MTIH SKG + D V++ GL++ F + EERRL Y Sbjct: 562 RVGLMTIHQSKGLEFDCVVVAGLEDQLLPFRS----------FAGGRSSTDIEEERRLFY 611 Query: 648 VALTRARHRVWALFNKEN----------PSPFVE----ILKNLDVPV-ARKP 684 VA+TRAR R+ + + PSPF+ L D PV R P Sbjct: 612 VAMTRARERLHLTWARTRRIYGKTQSFGPSPFLRDIPGELSAGDRPVFVRAP 663 >UniRef50_D2MH56 Helicase IV n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MH56_9BACT Length = 893 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 111/338 (32%), Positives = 176/338 (52%), Gaps = 11/338 (3%) Query: 348 LQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAEN 407 L + + L W S ++ ++ + E R + ++ PL + + L+ N Sbjct: 493 LYSLMRTFLSHWKSTGATEEVLRSRLVDLSGFE-RLRAEAFLNVIIPLREIYDRKLRDNN 551 Query: 408 AVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGD 467 +DF ++ QA L GR P+K ILVDEFQDIS RA +L A+ +QN LF VGD Sbjct: 552 ELDFDDMLAQASDALRDGRMRHPYKLILVDEFQDISWSRAEMLRAMLEQNQDCKLFVVGD 611 Query: 468 DWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 DWQAIY F+GA + + T F + F L +R N I VA+ F+Q+NP Q+ K + Sbjct: 612 DWQAIYGFAGADVLIMTNFRDEFDVAAEDQLTQNFRSNQGIVNVASWFVQKNPSQIPKEI 671 Query: 528 NSLTNGDKKAVTLLDESQLDALL--------DKLSGYAKPEERILILARYHH--MRPASL 577 + + + V ++ + + + + ++ ++ + ILARY+ + L Sbjct: 672 RAGDSLCEGVVHVVYYQRDEHIWPLVEVKLSEIVANGGTGKKSVYILARYNSLCLPQPQL 731 Query: 578 EKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDF 637 K + +L I MTIH SKG +ADYVI++G+ G FP + + + ++P VE F Sbjct: 732 LKWRESYSELDIQCMTIHKSKGLEADYVIVLGMNSGRHSFPCEIEDDPILKLVMPRVEPF 791 Query: 638 PDAEERRLMYVALTRARHRVWALFNKENPSPFVEILKN 675 AEERRL YVALTRA+ ++ L + PS F++ + + Sbjct: 792 EFAEERRLFYVALTRAKRKIILLAQHDRPSRFIKEIID 829 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 78/416 (18%), Positives = 148/416 (35%), Gaps = 34/416 (8%) Query: 35 EYLIPFNQLLAIHCKRGLVWGELEFVLPD-EKVVRLHGTEWGETQRFYHHLDAHWRRWSG 93 ++ + F + + L+W + V D +K V L G F + Sbjct: 13 QWKVSFVSVKDANISTHLLWWKKLIVRTDGDKAVFLPGLS-----SFAASKLRNAIARRV 67 Query: 94 EMSEIASGVLRQQLDLIATRTGENKWLTREQTSGVQQQI---RQALSALPLPVNRLEEFD 150 + ++ + + ++L ++ Q AL P+ Sbjct: 68 CQRLLIEVDEKEITRRLDKFYRQKQYLANRDVGRWCKEYPATHQVDHALQHPLFDQNVVT 127 Query: 151 NCREAWRKCQAWLKDIESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEH 210 + L + +HN+ + + ADFF +VE +PL Q RA + E Sbjct: 128 SDLSRLFVQIEDLLGKRTKLHEHNEEFIKQERIHQADFFERVEKNPLTNEQRRAAIVMED 187 Query: 211 SLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLH---T 267 L++A AG GKTS +V + G+ L + +P QI+ LAF + AA E+ +RI ERL Sbjct: 188 HHLLIASAGCGKTSAIVGKIGYALKKNFCAPSQIVTLAFNKNAANELRQRINERLGDLNG 247 Query: 268 EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQ 327 +I TFHAL L I + P V+ + + + + Sbjct: 248 HEIKVETFHALGLQFISEAKGIKPRVADWAVNLGENPGQVVERLVSELCKANPSFVAHWA 307 Query: 328 WLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSK 387 W + +F+ K + +A +A ++R + Sbjct: 308 NFLSLFHWEMKPLHFFHSRKEYELYLLAI-------------RAARLAGNEVKVRTIKGG 354 Query: 388 RIKLMAPLLKA---WKGALKAENAVDFS-GLIHQAIVILEKGRFISPWKHILVDEF 439 ++ + A + ++ E+ D+ L L+ G++ + + +D + Sbjct: 355 YVRSLEECAIANWLYVNGIQYEHERDYEHDLAS-----LDHGQYRPDFYYPQIDVY 405 >UniRef50_UPI0000E87DAA UvrD/REP helicase n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87DAA Length = 725 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 105/397 (26%), Positives = 169/397 (42%), Gaps = 53/397 (13%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 + + LN Q AV + S L+LAGAGSGKT VL +R WL+ ASP IL + F Sbjct: 9 NKQQGQELNLKQQEAVTLSDQSALILAGAGSGKTKVLTSRFAWLIQNQIASPGGILAVTF 68 Query: 250 GRKAAEEMDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 KAA+EM RI +L + + TFH L +++ + + + +A + Sbjct: 69 TNKAAKEMLVRISAQLPINPRGMWVGTFHGLCNRFLKKHYQDASLPQIFQILDSADQKSA 128 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 I K + N +D + + ++ G Sbjct: 129 IKRVMK-------------------------KMNIDEDFLPSKEVLYFIN---------G 154 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE---- 423 + + ++A + D+ K+ + KA++ E VDF+ L+ + + + + Sbjct: 155 NKEEGVRSNAYKAFDDISEKKN----AIYKAYEDQCLKEGVVDFAELLLRCLELFQNKPM 210 Query: 424 -KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + + S +KHILVDEFQD S + L L +NS +FAVGDD Q+IY F GA+ Sbjct: 211 IREHYQSIFKHILVDEFQDTSKLQYEWLKLLTAKNSF--IFAVGDDDQSIYGFRGARPGN 268 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGD---KKAVT 539 ++F L+ YR + I AN I+ N +L K L S ++ Sbjct: 269 MKDLQKDFKINNIIKLEQNYRSKNNILNAANAIIENNADRLGKNLWSEAGDGDLIRQYNA 328 Query: 540 LLDESQLDALLDKLSGY---AKPEERILILARYHHMR 573 L D + +LD++ G ++I IL R + Sbjct: 329 LDDRFETSYILDEIKGLHRSGSRYDQIAILYRNNAQS 365 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 44/194 (22%), Positives = 72/194 (37%), Gaps = 30/194 (15%) Query: 507 RIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDE------SQLDALLDKLSGYAKPE 560 + + FI N K + LDE + ++ ++ + + Sbjct: 475 NNIDESIDFI--NSYSTLKDHYGKDKDGSSRIENLDELVSAAKAYINEFREENTENESGD 532 Query: 561 ERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAA 620 + IL+ + + + MTIH+SKG + D V I GL+EG + Sbjct: 533 SKASILSDFLDFTSLESGELQASAGDDALQLMTIHSSKGLEFDTVFITGLEEGLCPHERS 592 Query: 621 ARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFV 670 E+ E EERRLMYVA+TRAR +++ + PS F+ Sbjct: 593 LSENNGLE------------EERRLMYVAVTRARQKLYLTLAQSRLTYGQTMYNLPSRFL 640 Query: 671 EILKNLDVPVARKP 684 + + N V P Sbjct: 641 DEIPNELVKRINAP 654 >UniRef50_A0LVT3 UvrD/REP helicase n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LVT3_ACIC1 Length = 508 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 107/505 (21%), Positives = 187/505 (37%), Gaps = 79/505 (15%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 L+ Q AV + +LAG G+GKT + R + G+ P+Q+L + F +AA E Sbjct: 14 LDDDQRAAVTAMPGPVGILAGPGTGKTRTIAHRIAHAVQSGQWRPQQVLAVTFTNRAAAE 73 Query: 257 MDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCS 316 + R+R L +D++ TFHA+AL ++ + +V A F+ + Q Sbjct: 74 LRHRLR-MLGVDDVSTGTFHAVALRQLRYFWPR--LVGGAFPRIVADKTPFLTQAAGQLG 130 Query: 317 EKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIAS 376 + + + + +++W+ + L + +L R HG A+ Sbjct: 131 VRLSDFD--VRDVAADLEWA-------------KVLQCPPQNYPALARRHGRVSAKPADE 175 Query: 377 APEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FISPW 431 A L ++ A + +DF ++ + +LE + Sbjct: 176 T---------------AALYDRYEALKSAAHCLDFEDVLLLLVALLETEPEAVRMVRGRY 220 Query: 432 KHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFG 491 + +VDE+QD++ LL A S+T + VGD QAIY F+GA F E + Sbjct: 221 QCFVVDEYQDVNALEQRLLDAWL--GSRTEVCVVGDPRQAIYGFAGATDRYLVEFAERYP 278 Query: 492 EGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLD 551 + L YR I A+R P + + + A + Sbjct: 279 QATMVSLTRNYRSTQEILAAAHRLAGGTPLIAVRGSGVSPTVVAYPTVEAEAQGVAASVA 338 Query: 552 KLSGYAKPEERILILARYH----------------HMRPASLEKAATRWPKLQIDFMTIH 595 +L + I +L R H +R A+ + + ++H Sbjct: 339 ELISSGVSPDDIAVLVRRHALAEPISAAFDEVGIRSVRIATASRTGVPRTAGAVTIASLH 398 Query: 596 ASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARH 655 A+KG + + V + G +G A + AEE+RL YV +TRAR Sbjct: 399 AAKGLEWEVVFLPGWADGILPDARALSVDAV-------------AEEQRLAYVGVTRARR 445 Query: 656 RVWALFNKE----------NPSPFV 670 + + + PS F+ Sbjct: 446 MLVVSYPRSVQRAGERVECEPSRFL 470 >UniRef50_Q018Z5 ATP-dependent DNA helicase (ISS) n=1 Tax=Ostreococcus tauri RepID=Q018Z5_OSTTA Length = 859 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 102/420 (24%), Positives = 179/420 (42%), Gaps = 39/420 (9%) Query: 186 ADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQIL 245 A+ V LN AQ AV+ + VLAG GSGKT VL+ R L+ + P +IL Sbjct: 62 AEALEPVHVRGLNDAQRAAVLAPVGATRVLAGPGSGKTHVLIGRVAHLIHEEKTPPREIL 121 Query: 246 LLAFGRKAAEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAA 302 + F KAA+E+ ER+R+++ ++ITA TFH++A ++++ +++P + + T Sbjct: 122 CITFTNKAAKELRERLRDKIGEVAAKEITAGTFHSVAARMLRRHGERIPGIGRTGEFTIY 181 Query: 303 RHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSL 362 + + K ++K Q ++ +++ Sbjct: 182 DADDSKQIVQSVLVNKFGESKKTAQ-----------------PGPMRNWISTAKSCVKHS 224 Query: 363 MRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVIL 422 + + G + A + I + +R L ++ L+ NA DF L+ + +L Sbjct: 225 VGLRGSQMLRALEDAKKPIPPMSQQR---FVELYDEYEDGLRQANAFDFDDLLSATVAML 281 Query: 423 E-----KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSG 477 E + + W +LVDEFQD S + L+ L + Q ++F VGD QAIY + G Sbjct: 282 EMCPDVRAYYERRWSQVLVDEFQDTSTTQYELIRKLSQ--PQGSVFVVGDADQAIYGWRG 339 Query: 478 AQMSLTT-AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQN--PGQLKKPLNSLTNGD 534 A+++ F ++F E + L T YR S I E A I+++ P L ++ D Sbjct: 340 AEVANIRTQFDQDFKEVQTHMLTTNYRSTSTIVEAAQAVIKESSFPSPLDLVAHTPGGRD 399 Query: 535 KKAVTLLDESQLDALL-----DKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 V D+ + + + + +L R + + LE+A R Sbjct: 400 VAIVEANDDREEAEFIALEARKLVQDSDLRYSDVAVLYRTNS-QARVLEEAFIRAGVPHT 458 Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 12/78 (15%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 + MT+HASKG + D V I G+++G F + D EE RL Y Sbjct: 661 KAKLMTMHASKGLEFDTVFIAGVEDGLIPF------------IRNGDSDDDQDEEVRLFY 708 Query: 648 VALTRARHRVWALFNKEN 665 V +TRA+ ++ +E Sbjct: 709 VGITRAKRKLMLCHARER 726 >UniRef50_B2S4R5 DNA helicase II n=3 Tax=Treponema RepID=B2S4R5_TREPS Length = 670 Score = 308 bits (790), Expect = 4e-82, Method: Composition-based stats. Identities = 96/391 (24%), Positives = 164/391 (41%), Gaps = 43/391 (10%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 S LN AQ +AV + LL+LAGAGSGKT V+ + L+ + PEQIL + F KAA Sbjct: 6 SALNEAQRQAVCHYGSPLLILAGAGSGKTRVITTKIAHLIRSRQVRPEQILAVTFTNKAA 65 Query: 255 EEMDERIRER-LHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM R + T TFHAL + I+++ + ++ + + + Sbjct: 66 REMRTRACALESAAQGATICTFHALGVWILRRYAVRLGLNPHFSIYDDHDVRALLPKILP 125 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 C + A + +++ + + +F E + R+++ +++ Sbjct: 126 HCDHSR--AGMLARGISQAKDYGLDCASF---ESVHARVSAPACAARAVL---------- 170 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFI----- 428 + A + ++ VDF LI + +L + + + Sbjct: 171 --------------GDRQFAHAYACYHRRMREMGTVDFGDLIMLPVQLLREHQDVAEQLH 216 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 + W+ ++VDE+QD + + L L + T L VGDD Q+IYRF GA++ F E Sbjct: 217 ARWQVVMVDEYQDSNVAQFHFLQVLT--GAHTYLCVVGDDDQSIYRFRGAEVKNILTFPE 274 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS-LTNGDKKAVTLLDESQLD 547 F + L+ YR I VA+ +++N +L K L + T G K + LL+ + Sbjct: 275 FFQNTQIIRLEYNYRSTDAILRVADSVVKKNQDRLGKALIAQRTGGTKPRLFLLNNQDEE 334 Query: 548 A-----LLDKLSGYAKPEERILILARYHHMR 573 A L+ + P IL R + Sbjct: 335 AALCVHLIQEARARGIPYADWAILYRVNAQS 365 Score = 79.0 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 26/97 (26%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + +TIH +KG + VI+ GL+ G + P ++ EERRLMYV Sbjct: 578 VHLITIHNTKGLEFRRVILTGLENG----------------VFPRDDEADIQEERRLMYV 621 Query: 649 ALTRARHRVWALFNKEN----------PSPFVEILKN 675 A TRA ++ PS F+ L + Sbjct: 622 ACTRAMDSLYLTACAYRRMWGRHTAMKPSRFLTELDS 658 >UniRef50_A8R903 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=A8R903_9FIRM Length = 729 Score = 308 bits (790), Expect = 4e-82, Method: Composition-based stats. Identities = 84/399 (21%), Positives = 158/399 (39%), Gaps = 51/399 (12%) Query: 204 AVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRE 263 AV + L ++AGAGSGKT V+ R +L+ + P +IL + F KAA EM ER+ Sbjct: 14 AVTCVDRHLRIIAGAGSGKTRVVTTRIAYLIEQCHIYPNKILAITFTNKAAREMKERVEG 73 Query: 264 RLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQ 321 L + + T H+ + ++++ A + + KQ Sbjct: 74 FLGDTAQAVMISTIHSFCVRLLREDILVHGYPRNFTILDADDQRSILRDAYKQL------ 127 Query: 322 AKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEI 381 Q V ++ R+ ++S + + +A A E Sbjct: 128 ------------QVDVKTYSY-----------HRVLSYISNNKTNFIDANSALARANYE- 163 Query: 382 RDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RFISPWKHILV 436 ++MA + ++ L +DF L+ IL++ ++ + ++ V Sbjct: 164 ------GERIMANVYAFYEKRLAEMFGLDFDDLLIFTYHILKEHVEVRKKWQRRFTYLHV 217 Query: 437 DEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERC 496 DEFQD+ + ++ L K++S L VGD Q IY + GAQ+ + F ++F Sbjct: 218 DEFQDVDMLQYQIIKMLVKEDSY--LCVVGDPDQTIYTWRGAQVDIIMNFEKDFPHSHTV 275 Query: 497 DLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL---DESQLDALLDKL 553 L+ YR I + +N I+ N +++K L + D++ V D ++ + K+ Sbjct: 276 ILNENYRSTQPILQASNELIKNNRNRIEKELFTRNESDERIVHFTAMDDYNEPIWVAGKI 335 Query: 554 SGY---AKPEERILILARYHHMRPASLEKAATRWPKLQI 589 I +L R +++ + + +I Sbjct: 336 LSLHHNGVKYRDIAVLYRSNYLSRGLEKALLDQHIPYRI 374 Score = 82.0 bits (201), Expect = 6e-14, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 20/106 (18%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + MTIHA+KG + D V + L +G FP + + L EERRL YV Sbjct: 550 VQLMTIHAAKGLEFDRVFVYSLCDGI--FPNERSINEGGQQAL--------EEERRLAYV 599 Query: 649 ALTRARHRVWALFNKENP---------SPFVEIL-KNLDVPVARKP 684 A TRA+ +++ + S FV+ + ++ V KP Sbjct: 600 AFTRAKKQLFLSDSYGYSYVLDKLKTTSRFVKEIPQDCLQEVGAKP 645 >UniRef50_Q600N7 ATP-dependent DNA helicase n=6 Tax=Mycoplasma RepID=Q600N7_MYCH2 Length = 769 Score = 308 bits (790), Expect = 4e-82, Method: Composition-based stats. Identities = 99/393 (25%), Positives = 177/393 (45%), Gaps = 43/393 (10%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN Q AV++ L ++AGAG+GKTSVL + +++ A P +IL L F KAAE Sbjct: 25 QLNEKQKIAVISNSSHLRIVAGAGTGKTSVLTKKIAYIINESLAYPSRILALTFTNKAAE 84 Query: 256 EMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM R+ + + ++DI TFH+L I++ +K + +S E+ ++++R Sbjct: 85 EMRNRVEKLVGEKSKDIQILTFHSLCNLILRLEAKNIVELS----------EIPLSDYRF 134 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 +++ Q K + L + ++ + DD + A +++S + + ++ Sbjct: 135 NIIDEQDQKKIVEKLLGKYLKAN-------DDRDETKISAFDAIKFISNAKNWEKSPEDL 187 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRFI 428 + S E+ ++ + + + K N +DF L+ + E + R+ Sbjct: 188 LKSINNELD-------QIKVQVYQKYLEKTKENNIIDFDDLLLYTKIAFEKSPEIRSRWQ 240 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 + +LVDEFQD S + +L K +T L VGD Q IY + GA SL + Sbjct: 241 RKFDFVLVDEFQDTSLVQYLILKIFIK--DKTRLVVVGDPDQTIYSWRGADPSLILNLEQ 298 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD------ 542 +F + + LD YR I + AN I+ N ++KK L + ++ +K + D Sbjct: 299 DFPDLQTVILDKNYRSTQNILDAANNLIENNQNRIKKKLVA-SSKEKIEIHFEDLANERG 357 Query: 543 ---ESQLDALLDKLSGYAKPEERILILARYHHM 572 E + + ++ I ILAR + Sbjct: 358 AEVEWIYRKIQELITKNKVTYRDIAILARSNFY 390 Score = 87.1 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 10/83 (12%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 + +I+ +T+H+SKG + +YV +VG+ +G FPA + +L EERR Sbjct: 592 SQNKINLLTVHSSKGLEFEYVFLVGMNQGV--FPA--------QKVLDQNSTSEYEEERR 641 Query: 645 LMYVALTRARHRVWALFNKENPS 667 L +VA+TRA+ ++ PS Sbjct: 642 LAFVAVTRAKRVLYITNGYRAPS 664 >UniRef50_C3JBX6 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria RepID=C3JBX6_9PORP Length = 809 Score = 308 bits (790), Expect = 4e-82, Method: Composition-based stats. Identities = 90/405 (22%), Positives = 158/405 (39%), Gaps = 49/405 (12%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 LNPAQA AV+ + LV+AGAGSGKT VL + LL G P +++ L F KA Sbjct: 5 EKELNPAQAEAVLYDDGPALVIAGAGSGKTRVLTYKLAHLLEEG-YDPHKLMALTFTNKA 63 Query: 254 AEEMDERIRERLHTED---ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 A EM R+ + + D + TFH++ ++ + + + + + Sbjct: 64 AREMLSRVESMVGSRDTFRMKLGTFHSVFSRYLRIYAPLLGFTPNFSIYDTSDSKSLVKR 123 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 K + F+ + + R++ + ++ Sbjct: 124 IVKDMALDP---------------------KFYTPKLVLGRISHCKNNLIT--------- 153 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFI-- 428 E A+ E + + + ++ + A+ + NA+DF L++ ++L + Sbjct: 154 PEGYAAGGEYAEYDYRRGVPMLHSVYAAYVAQCRQANAMDFDDLLYYFNILLRDHPEVQA 213 Query: 429 ---SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 + ++L+DE+QD +P + + L + + +FAVGDD Q+IY F GA M Sbjct: 214 ECAASVDYLLIDEYQDTNPSQYLIARRLVEA--KQRIFAVGDDAQSIYSFRGASMQNILT 271 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQ 545 F F L+ YR + RI +AN I+ N ++KK + S +K ES Sbjct: 272 FTHTFPSARLFKLEENYRSSQRIVALANSLIEHNVHRIKKDVFSNRAKGEKIDLYEMESG 331 Query: 546 LDALLDKLSGYAKP--------EERILILARYHHMRPASLEKAAT 582 + K IL R + ++ Sbjct: 332 YREAQHVVESIYKRYCKHSETSYGSFAILYRTNAQSRLFEDQLRQ 376 Score = 79.3 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 31/96 (32%), Positives = 42/96 (43%), Gaps = 23/96 (23%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + MTIHA+KG + D+V IVGL+EG FP+ RRL+YV Sbjct: 573 VHLMTIHAAKGLEFDHVYIVGLEEGL--FPSMLSAEEENIEEE-----------RRLLYV 619 Query: 649 ALTRARHRVWALFNKEN----------PSPFVEILK 674 A+TRA+ F + PS F+ L Sbjct: 620 AITRAKEYCSISFARYRAINGMTEYMIPSRFLRDLD 655 >UniRef50_Q123W9 UvrD/REP helicase n=16 Tax=cellular organisms RepID=Q123W9_POLSJ Length = 716 Score = 308 bits (789), Expect = 4e-82, Method: Composition-based stats. Identities = 94/418 (22%), Positives = 163/418 (38%), Gaps = 65/418 (15%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 S+ LN AQ AV LVLAGAGSGKT V+ + G L+ G EQI + F KA Sbjct: 22 STGLNLAQQEAVNYLHGPCLVLAGAGSGKTRVITHKIGRLIQSG-LKAEQIAAITFTNKA 80 Query: 254 AEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 A EM ER + + + + TFHAL + +++Q + + + + + + + Sbjct: 81 AAEMRERAKSLIGKQAKGVLICTFHALGVRMLRQDGQALGLKQQFSILDSDDVTSILKD- 139 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 G + QW Q +++ + ++ + A Sbjct: 140 -----------AGGSTDVATARQW-------------QWTISAWKGQGLNAAQAAAQASN 175 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-FISP 430 + +L+A ++ ++ L A +VDF LI + +L + + Sbjct: 176 D---------------EERLVARVMAHYEERLTAYQSVDFDDLIGLPLKLLREHEAVRNK 220 Query: 431 WK----HILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 W+ H+LVDE+QD + + +L L + AVGDD Q+IY + GA + Sbjct: 221 WQQSLGHVLVDEYQDTNATQYEVLKLLVGTRGR--FTAVGDDDQSIYGWRGATLDNLKKL 278 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQL 546 E++ + L+ YR S I AN I NP K L S + + +S+ Sbjct: 279 PEDYPNLKVVKLEQNYRSTSAILRAANNVIGPNPKLFPKTLFSELGEGEPVRVVDCDSEE 338 Query: 547 DA---LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQ 601 ++ ++ E + ++Y W + + H +K + Sbjct: 339 HEAERVVARIQSLRAGGELQAVGSQY------------KEWKDFCVLYRANHQAKPLE 384 Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 15/113 (13%) Query: 582 TRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAE 641 + + T+HASKG + +V++ G EG F + + + E Sbjct: 581 REGDQNVVTLSTLHASKGLEWPHVMLAGCNEGLLPFKLEEDDGSNTDNI-----ALRLQE 635 Query: 642 ERRLMYVALTRARHRV---WALFNKEN-------PSPFVEILKNLDVPVARKP 684 ERRLMYV +TRA+ + W K+N PS F+ + V P Sbjct: 636 ERRLMYVGITRAQRTLAVNWLRRRKKNRDTIAGIPSRFIAEMALDKATVKEDP 688 >UniRef50_B9NSL7 UvrD/REP helicase n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NSL7_9RHOB Length = 971 Score = 308 bits (789), Expect = 5e-82, Method: Composition-based stats. Identities = 113/302 (37%), Positives = 172/302 (56%), Gaps = 14/302 (4%) Query: 389 IKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAA 448 + + P+ + ++ L+ E +DF +I +A E G++ SP+KHILVDEFQDIS R Sbjct: 555 LSIFEPVYREYQSRLEGEGRIDFEDMILRACTYAEDGKYKSPFKHILVDEFQDISKSRGR 614 Query: 449 LLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEG--------ERCDLDT 500 L+ AL+ Q+ +FAVGDDWQ+I+RF+G+ ++L F + FG DL Sbjct: 615 LVKALKAQHPDGRVFAVGDDWQSIFRFAGSDINLMRRFGDEFGGTFDGQTGVHRTVDLGR 674 Query: 501 TYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD------ESQLDALLDKLS 554 T+R +I E A +F+ QNP QLKK + S +A+ ++ +++L L L+ Sbjct: 675 TFRSVDQIAEAAMKFVLQNPAQLKKTVMSAGVAKSQALKVVPTFRHDADAKLKDTLRALA 734 Query: 555 GYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGS 614 + +L+L RY ++RP +L +P L I + TIHASKG +AD+VI++GL G Sbjct: 735 ANDGDQISVLLLGRYRNLRPDNLTVLRREFPCLDISYKTIHASKGLEADHVIVLGLHRGR 794 Query: 615 DGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFVEILK 674 GFP+ + + E + P E F +AEERR+ YVALTRARH V + + S FV + Sbjct: 795 TGFPSEIVDDPLLELVSPEAEPFENAEERRVFYVALTRARHTVTLMSSASKQSAFVTEMM 854 Query: 675 NL 676 + Sbjct: 855 DD 856 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 92/410 (22%), Positives = 164/410 (40%), Gaps = 26/410 (6%) Query: 27 IKVSGDRHEYLIPFNQLLAIHCKRGLVWGELEFVLPDEKVVRLHGTEWGETQRFYHHLDA 86 + VSG + + A +RG + + D ++ + + + + F ++ Sbjct: 38 LVVSGRGQNGSVSRLR-NAPKVRRGWLASTVCLNFRDH-ILAIGSVKHRDAESFAEEVNR 95 Query: 87 HWRRWSGEMSEIASGVLRQQLDLIATRTGENKW----LTREQTSGVQQQIRQALSALPLP 142 W + E+ + + L + +++ L Q+ L L P Sbjct: 96 AWVAHVTDQVELERPAIDRVLAAMDELADPHRYPSACLVAPDLREAQRLAEDILGNL--P 153 Query: 143 VNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQA 202 LE D R + + ++ +S R + + + L E+++FF ES+PL P Q Sbjct: 154 DEALE--DRIRSDANRIKKFVSHSDSLRNRAIETFEGRQLAEWSEFFDTFESNPLTPEQR 211 Query: 203 RAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIR 262 A++ E + LVLAGAGSGKTSV+ A+AG+L+ +P +ILLLA+ + AA+EM ERI Sbjct: 212 TAIIADEDATLVLAGAGSGKTSVITAKAGYLIKTKTRAPSEILLLAYAKDAAKEMSERIE 271 Query: 263 ERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQA 322 R E + ARTFHALA II P ++K D A L + Sbjct: 272 LRCG-EPLEARTFHALANGIIGIVEGSKPALAKHATDDKAYLALIKDILIALVRTTAGVS 330 Query: 323 KGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIR 382 + W + + + WD +K D ++ L ++ + EE+ Sbjct: 331 RAIIGWFSFAR---LDAKSEWDFKKKH-------DYYMHLEKLDLRTLQGEQVKSLEELM 380 Query: 383 DLFSKRIKLMAPLLK-AWKGALKAENAVDFSGLIHQAIVILEKGRFISPW 431 + + ++ + + D+ + G +I + Sbjct: 381 IANWLYENGIEYEYEPNYEHKVSEDGYRDYCP----DFRLKRSGVYIEHF 426 >UniRef50_Q4PDX2 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4PDX2_USTMA Length = 1176 Score = 308 bits (789), Expect = 5e-82, Method: Composition-based stats. Identities = 91/417 (21%), Positives = 176/417 (42%), Gaps = 32/417 (7%) Query: 196 PLNPAQARAVVNGEHSLL-VLAGAGSGKTSVLVARAGWLLAR--GEASPEQILLLAFGRK 252 L+P+Q A + + L +LAG GSGKT VL +R WL+ + PE IL++ F K Sbjct: 45 SLSPSQYAAATHPPTTCLQILAGPGSGKTRVLTSRVAWLILDPANKLRPEDILVVTFTNK 104 Query: 253 AAEEMDERIRERLHTEDI---TARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIA 309 AA EM R+ + + E + TFH++ +++ + + + + + + + Sbjct: 105 AANEMKMRLVKLIGKERVDNLVIGTFHSVCARYLRKYGRLISLSNNFSIIDSEDAKRMLK 164 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 K+ + L +E PE + K + + + R+ L Sbjct: 165 SILKEL----------KAELEKENLELKPEQAMSEISKAKAKEIDPV-RYRQLAEQEAAK 213 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-GRFI 428 A A ++ S + ++MA + ++ L NA+DF L+ + + + + + Sbjct: 214 SASRKAPIGKQFTGSASFK-QVMATIYIMYQKQLVDANALDFDDLLVYGVQLFRRQNQVV 272 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 +H+LVDEFQD + + L+ + + ++ VGD Q+IY + A++ Sbjct: 273 RNIRHVLVDEFQDTNITQYELMRLVATASQAVSI--VGDPDQSIYGWRSAEIGNLDKMTR 330 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAV------TLLD 542 F ++ L+ YR I E+A R +QQ+ ++ K L + V L+ Sbjct: 331 EFKGTQQARLEENYRSTGAILELALRVVQQDTSRVDKDLYTSHPRGLPVVLKSHASAQLE 390 Query: 543 ESQLDALLDKLS---GYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHA 596 + + + + +L G +IL R++++ A + +R + M H Sbjct: 391 AAYIASEIKRLVAHYGGVLDYNDFVILLRFNYLSRAIEAELQSR--GIDSKMMGGHK 445 Score = 78.6 bits (192), Expect = 7e-13, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 13/81 (16%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 K ++ T HA+KG + V I ++EG FP+ E E AEERR Sbjct: 785 KKPKVTISTCHAAKGLEWPVVFIPAIEEG--CFPSFRCEKPDE-----------IAEERR 831 Query: 645 LMYVALTRARHRVWALFNKEN 665 L+YVA+TRA ++ Sbjct: 832 LLYVAMTRAESMLYLTHASYR 852 >UniRef50_B0SSS8 ATP-dependent DNA helicase PcrA n=6 Tax=Leptospira RepID=B0SSS8_LEPBP Length = 678 Score = 308 bits (788), Expect = 6e-82, Method: Composition-based stats. Identities = 100/409 (24%), Positives = 162/409 (39%), Gaps = 55/409 (13%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN AQ AV + LLV AGAGSGKT V+ R ++ + +I+ L+F K+A+ Sbjct: 9 KLNAAQMEAVSTIQGPLLVFAGAGSGKTRVITNRIAHMVEGVKIPASKIVALSFTNKSAK 68 Query: 256 EMDERIRERLHTE---DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM ER+R+ + E IT TFH+L L I+++ K+ E F+++ Sbjct: 69 EMAERLRKMVPREKLKGITLSTFHSLGLKILKEHIGKLGYNETFLLFNGTDQEAFVSDLL 128 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 K D +K+ R + R +S + + Sbjct: 129 KS--------------------------KRLDPKKVPPR---EILRRISYAKNTQVHPKD 159 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----F 427 + ++ + A + ++ LK +NA+DF LI +L + + Sbjct: 160 NGLTGEFDL---------VAAEIFPLYEDGLKEKNAIDFDDLILLPKRLLAEFPEIAAYY 210 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 ++ LVDEFQD + + L+ R + L VGDD Q+IY F G+ + L F Sbjct: 211 QRKHEYFLVDEFQDTNQLQYEFLSLFR--GNSDNLCVVGDDDQSIYAFRGSNVQLILNFE 268 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLD 547 F + L YR S I + AN IQ N G+ +K L S ++ + + Sbjct: 269 REFPHAKVVRLLENYRSTSLIIQAANSLIQNNIGRKEKTLYSRIPSAERVEYYETADERE 328 Query: 548 A-------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + L + I IL R + E+ R ++ Sbjct: 329 EAIFVAGRIQTLLIKNEFKGKEIAILFRTNFQSRPFEEELRNRSIPYKV 377 Score = 75.9 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 21/101 (20%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 ++ +T+H SKG + D V +VGL+EG P + E + RRL+Y Sbjct: 562 RVQLLTMHQSKGLEYDLVFLVGLEEGI--LPNSRVIEEEGEVVDEE---------RRLLY 610 Query: 648 VALTRARHRVWALFNKEN----------PSPFVEILKNLDV 678 V +TR R +++ + PS F+ L V Sbjct: 611 VGMTRPRRKLYLTSARTRRKFGEQIESAPSRFLNELSQDAV 651 >UniRef50_Q6AJ72 Probable ATP-dependent DNA helicase, UvrD/REP family n=1 Tax=Desulfotalea psychrophila RepID=Q6AJ72_DESPS Length = 733 Score = 307 bits (787), Expect = 7e-82, Method: Composition-based stats. Identities = 88/395 (22%), Positives = 160/395 (40%), Gaps = 46/395 (11%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 ++ S LNPAQ AV E +LV+AGAGSGKT L+ R LL +G +PE ILLL F R Sbjct: 16 IDLSGLNPAQHLAVTTTEGPVLVIAGAGSGKTRTLIYRVAHLLDKG-VAPESILLLTFTR 74 Query: 252 KAAEEMDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIA 309 KA++EM R E L + TFH +A +++Q + A E I Sbjct: 75 KASQEMVWRAGELLGENCSRVMGGTFHGVANMLLRQYGSHMGWGKGFTIIDRADAEGIIN 134 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 + K + + + + + +E + + D ++R+ Sbjct: 135 LLKSSLEMGKGDKRFPGKRIIINIISGSINKSTPMEELIHDQYGHLADHCADILRLG--- 191 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFIS 429 + + + +D+ L+ ++L++ + Sbjct: 192 ---------------------------RHYHTFKRDNVLMDYDDLLVNWKLLLQESPEVR 224 Query: 430 -----PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 +++++VDE+QD + +A ++ L ++S + VGDD Q+IY F GA Sbjct: 225 SMMSHRFRYVMVDEYQDTNLIQADIIRLLASEHS--NVMVVGDDSQSIYSFRGADFYNIM 282 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL---L 541 F + F + L+ YR I + N I + K L+S G+++ + Sbjct: 283 RFPKEFPGAKLIKLEENYRSTQPILSLTNDLIANASEKYTKSLHSNIKGEQRPIVYGARD 342 Query: 542 DESQLDALLDKLSGYAKPE---ERILILARYHHMR 573 ++++ +L ++ + + I +L R Sbjct: 343 EQAEATFILARVQQHIRDGIDPSEIAVLFRSGFHS 377 Score = 87.1 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 23/102 (22%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 ++ TIH+SKG + D V ++GL EG EERRL+Y Sbjct: 553 RMVLSTIHSSKGLEFDAVFVMGLAEGRFPHANTVGFGP------------QWEEERRLLY 600 Query: 648 VALTRARHRVWALFNKE-----------NPSPFVEILKNLDV 678 VA TRAR ++ + ++ SP++ LK++ Sbjct: 601 VAATRARKHLYLTYPRQMMTPDRQFKRVGMSPYLVELKDMLY 642 >UniRef50_Q8EUN0 ATP-dependent DNA helicase n=1 Tax=Mycoplasma penetrans RepID=Q8EUN0_MYCPE Length = 738 Score = 307 bits (786), Expect = 9e-82, Method: Composition-based stats. Identities = 94/407 (23%), Positives = 171/407 (42%), Gaps = 39/407 (9%) Query: 196 PLNPAQARAVVNGEH-SLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 N Q A+ + L+V+AGAGSGKT+VL RA +LL ++IL F KAA Sbjct: 8 SFNEKQYEAITAPDDVPLMVIAGAGSGKTAVLTYRAVYLLNELNYVSDRILGFTFTNKAA 67 Query: 255 EEMDERIRERLHTEDI-TARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM +RI + + TFH++ L I+++ K++ I N T + + ++ Sbjct: 68 NEMKDRITKVIPNRSFKYIGTFHSVCLRILREDIKELNIGKINSNFTIIDEDDQNSILKE 127 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 + + + N +D + L+ + + ++ Sbjct: 128 IYKLNNFDKQILNYKVCLSWISKLKSDNIYDANDVYEWLSFLDNTYDGKVKK-------- 179 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE----KGRFIS 429 + A + + + L+ N +DF LI A +LE + ++ + Sbjct: 180 ----------------DIFAAVYEGYINFLRDGNLLDFDDLIKYARRVLEIEEIRTKWQN 223 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 + +ILVDEFQD + + ++ L K + +FAVGD Q IY + GAQ ++ F ++ Sbjct: 224 RFDYILVDEFQDTNYDQYQIIKLLSK--NFKNIFAVGDPDQMIYSWRGAQENIFEVFKKD 281 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQ---- 545 F + L+ YR I +AN IQ+N ++KK L + ++ + + + + Q Sbjct: 282 FSDSLTIVLEKNYRSTKNILNIANSLIQKNKNRIKKNLYTDSSTESEIIYFEADDQNLES 341 Query: 546 ---LDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + D + + I IL R +++ E + +I Sbjct: 342 KFVCTRIKDLVDSKKYNYKDIAILYRANYLSRNIEEFLSNYRIPYRI 388 Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 24/109 (22%) Query: 578 EKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDF 637 E+ + + + MT+HASKG + V I+ E FP+ + +E+ Sbjct: 550 EEENQKNKQDSVSLMTVHASKGLEFKIVFIIQFNENI--FPS-----------IRSLEEG 596 Query: 638 PDAEERRLMYVALTRARHRVWALFN-----------KENPSPFVEILKN 675 EERR+ YVA+TRA+ ++ + PS F+ + + Sbjct: 597 NLDEERRIAYVAITRAKENLYISCCNGTSFFGNREMEREPSRFISEIGD 645 >UniRef50_B7C8B0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8B0_9FIRM Length = 725 Score = 307 bits (785), Expect = 1e-81, Method: Composition-based stats. Identities = 81/390 (20%), Positives = 152/390 (38%), Gaps = 51/390 (13%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q A + ++AGAGSGKT VL+AR +L+ P +IL + F KAA E Sbjct: 9 LNENQRTAATTINEHVRIIAGAGSGKTRVLMARIVYLVQDCGILPNRILAITFTNKAANE 68 Query: 257 MDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M R+ +L T + T H+L + ++++ + + + + K Sbjct: 69 MKTRLTAQLGSMTSVVRISTIHSLCVRMLREDADLIGYPKTFAIMDPEDQKAILKPIYKT 128 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 K R +++ ++ A ++ Sbjct: 129 LEVDKTTISYNRALGA---------------------ISAYKTNYIDPQMAANMAMDDVS 167 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRFIS 429 + +A + ++ A+DF L+ + +L K ++ + Sbjct: 168 IT---------------LAKIYAGYEARRNEMKAMDFDDLLLEGHRLLNSVSSVKEKWQN 212 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 +I VDEFQD+ P + ++ L +N+ L VGD Q IY + GA + + F+++ Sbjct: 213 RLDYIHVDEFQDVDPIQYGIIKLLTGKNTH--LCVVGDPDQTIYTWRGASVDIILKFNKD 270 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL---LDESQL 546 F + L+ YR I + +N I+ N ++ K L + GD+K D + Sbjct: 271 FEPCKTVILNENYRSTQPILDASNAVIKYNKERIDKDLYTKLPGDEKITMFEGKEDSEEP 330 Query: 547 DALLDKLSGYAK---PEERILILARYHHMR 573 + +++ K + + IL R ++ Sbjct: 331 IFVARQINEKHKKGLEYKDMAILYRSNYSS 360 Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 54/139 (38%), Gaps = 21/139 (15%) Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQAD 603 L L + ++ + + + + A + + MT+HA+KG + D Sbjct: 511 DNLKELKEDIAQSMIEDPEMTLESYLQ--DIALFTDKTQETSENTVSLMTVHAAKGLEFD 568 Query: 604 YVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNK 663 V +V +G FP++ EERRL+YVA+TRA+ ++ +N Sbjct: 569 TVFLVNFNDGV--FPSSRACD--------EGGMKALEEERRLLYVAMTRAKKTLYITWNT 618 Query: 664 ---------ENPSPFVEIL 673 + PS F + Sbjct: 619 GFSYMQDAFKTPSRFRAEI 637 >UniRef50_C1ZKV9 DNA/RNA helicase, superfamily I n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZKV9_PLALI Length = 680 Score = 307 bits (785), Expect = 1e-81, Method: Composition-based stats. Identities = 99/408 (24%), Positives = 162/408 (39%), Gaps = 54/408 (13%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 ++ S LN Q AV LLVLAGAG+GKT V+ R L+A G PE+IL + F Sbjct: 2 LDISHLNRPQQEAVRTHRGPLLVLAGAGTGKTRVITYRMADLIAAG-VDPERILSVTFTN 60 Query: 252 KAAEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFI 308 KAA EM +R L + T TFH+ + I++Q + + E Sbjct: 61 KAAREMLDRTSLLLGRTMKKRPTISTFHSWCVGILRQEIDSLGYPKQFVIYDRGDQESAA 120 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 + + K L +++ RW M Sbjct: 121 RKALQVLKMTDTALK-------------------------PGDLLAQISRWKMQGVMPDL 155 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG--- 425 AQ EI D +++ MA + ++ ALKA VDF L+ + + Sbjct: 156 AQ---------EIADSDHEQLAGMA--YRRYQLALKAAGGVDFDDLLFLTFQLFKHHPEA 204 Query: 426 --RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 R + + + +DE+QD + + L+ ++ +++ L VGDD Q+IY + GA++ Sbjct: 205 LERQQNRFDFVQIDEYQDTNELQFRLIESIVRRHQ--NLCVVGDDDQSIYGWRGAEVKHI 262 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDE 543 F ++F + L+ YR I ++AN+ + N G+ +K L + G + Sbjct: 263 LGFKQSFPAAKVVRLEDNYRCTESIIQLANQLVAHNRGRHEKRLIAHRGGTSVVFREYPD 322 Query: 544 SQLDA------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWP 585 Q +A + + I IL R + +P E R Sbjct: 323 EQAEAEGVVRDIAYLIHQLNVRPCEIAILFRTNE-QPRIFEHELRRKQ 369 Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 18/105 (17%) Query: 580 AATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPD 639 A R + I MT+H++KG + + V +VGL+EG + E Sbjct: 546 APERPDENAITLMTLHSAKGLEFERVYLVGLEEGILPHKRSVDEE--------FENPSSV 597 Query: 640 AEERRLMYVALTRARHRVWALFNK----------ENPSPFVEILK 674 EERRL YV +TRA+ + ++ PS F++ ++ Sbjct: 598 EEERRLCYVGITRAKDFLTITRSQSRVKWGKKRETKPSRFLKEMR 642 >UniRef50_D1B9M8 UvrD/REP helicase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9M8_THEAS Length = 653 Score = 306 bits (783), Expect = 2e-81, Method: Composition-based stats. Identities = 100/398 (25%), Positives = 164/398 (41%), Gaps = 56/398 (14%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNP Q AV + + L+LAGAGSGKT VL + +L++ SP +IL + F KAA Sbjct: 12 GLNPKQVEAVTYCDGNQLILAGAGSGKTRVLTRKIAYLISHKGVSPSKILAVTFTNKAAG 71 Query: 256 EMDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM +R+ L I TFH+ L+ +++ + Sbjct: 72 EMRQRVERLLGGSLHGIRICTFHSYGLNFLRRN--------------------------E 105 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 + + A + + + ++ +R S L S + G A Sbjct: 106 EIMRRMGYATPLVVIDRSDQKRLLKLLLKENNVDERRVDPSWLMEAFSAAKGEGNGSAYF 165 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RFI 428 A L +A++ ++++ A+DF LIH + IL R + Sbjct: 166 RGEA---------------QRLFEAYEAKMRSQGALDFDDLIHLPLKILSTHREALEREL 210 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 + +LVDE+QD++ + LL L + +T VGD QAIY + GA +S+ F + Sbjct: 211 DSIEWVLVDEYQDVNRSQYMLLKRLSSRGQRT--VVVGDPDQAIYGWRGADVSMILNFDK 268 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL---DESQ 545 +F + L+ YR I E AN I +N + KK L + + +K L DE Sbjct: 269 DFQGAKVTVLEQNYRSTGHILEGANCVIARNSDRPKKNLWTAASRGEKIRILKARNDEED 328 Query: 546 LDALLD---KLSGYAKPEERILILARYHHMRPASLEKA 580 L+D +L G + + IL R + + ++ Sbjct: 329 SRCLVDWILELQGEGYALKDMAILYRVNALSRLYEQRL 366 Score = 85.1 bits (209), Expect = 7e-15, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 51/143 (35%), Gaps = 24/143 (16%) Query: 543 ESQLDALLDKLSGYAKPEERILILARYHHMRPAS--LEKAATRWPKLQIDFMTIHASKGQ 600 E + + ++ + +L + A ++ +T+HA+KG Sbjct: 494 EREDQSTFEERLQNVEELMSVLPEGSIDDVLSEVALFSDADVASGDDRVSLLTLHAAKGL 553 Query: 601 QADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWAL 660 + V +VGL+EG + + E EERRL YV +TRA+ R++ Sbjct: 554 EFPVVFMVGLEEGIFPNAKCREDRSLLE------------EERRLFYVGMTRAQERLFLS 601 Query: 661 FNKENP----------SPFVEIL 673 S F+ + Sbjct: 602 GAARRVLFGSFMMNPFSRFLSEI 624 >UniRef50_P45612 Probable DNA helicase II homolog n=4 Tax=Mollicutes RepID=UVRD_MYCCT Length = 722 Score = 306 bits (783), Expect = 2e-81, Method: Composition-based stats. Identities = 81/381 (21%), Positives = 162/381 (42%), Gaps = 47/381 (12%) Query: 203 RAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIR 262 AV+N + + ++AGAGSGKT V+ + +L+ + P +IL + F KAA+EM ER+ Sbjct: 16 AAVLNIDKPVRIIAGAGSGKTRVITTKIAYLIEKQNIDPSRILAVTFTNKAAKEMKERVL 75 Query: 263 ERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKA 320 + + + TFH+ +++ K + + K + + I K+ + + + Sbjct: 76 QITNNSFKSPFISTFHSWCSKVLRIDGKHIGLEDKFLIIDSDDQKRIIKSALKESNIELS 135 Query: 321 QAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEE 380 + D + +++ ++ W E + E Sbjct: 136 E---------------------NDKKTFDKKILYKIKEWK-----------EELVDPSEA 163 Query: 381 IRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRFISPWKHIL 435 I + S K A + + ++ L N++DF L + ++ ++ + + ++L Sbjct: 164 ILNATSTLEKNFAVIYRLYQNTLLKNNSLDFDDLQIYVYRLFKQNNEILNKWRNAYDYVL 223 Query: 436 VDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGER 495 VDEFQD + + +L+ L + L VGD Q IY + GA++ + F++ + Sbjct: 224 VDEFQDTNELQFSLIKFLTINTNH--LTVVGDPDQTIYSWRGAKLDIILNFNKTYSNAIS 281 Query: 496 CDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAV------TLLDESQLDAL 549 L+ YR +I +++N FI+ N + K + + KK V + S + + Sbjct: 282 IVLNQNYRSTKQILDISNSFIKNNKFREHKEIFTNNKSGKKVVLKECNSKTSEASYVSSK 341 Query: 550 LDKLSGYAKPEERILILARYH 570 + +L + I IL R + Sbjct: 342 IKELVKQGYHYKDIFILYRMN 362 Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 77/211 (36%), Gaps = 38/211 (18%) Query: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQ---QNPGQLKKPLNSLTNGDKKA 537 E F + LD T I + IQ +N +++K + L N + Sbjct: 457 KNLDELIEVFKTAHQLYLDNT--NIEEILKY--LLIQSGYENKLKIRKEQDDLENIN--- 509 Query: 538 VTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHAS 597 L D+ + Y++ + I L A ++ +T+HA+ Sbjct: 510 -ALYDQLKRFDEDFDPKYYSEENKLIAFL-----QEEALTSDIDEAEQIDKVSLLTVHAA 563 Query: 598 KGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRV 657 KG + V I GL +G FP+ E+ + E EERR +YVALTRA+ + Sbjct: 564 KGLENKVVFITGLNQGI--FPSRISETSINEL----------EEERRALYVALTRAKDEL 611 Query: 658 WALFNKE----------NPSPFVEILKNLDV 678 + + K PS F+ L Sbjct: 612 FLTYVKGDYSHIMQSELKPSKFIHELDKDLY 642 >UniRef50_Q0SMP9 Rep helicase, single-stranded DNA-dependent ATPase n=19 Tax=Borrelia burgdorferi group RepID=Q0SMP9_BORAP Length = 659 Score = 306 bits (783), Expect = 2e-81, Method: Composition-based stats. Identities = 94/399 (23%), Positives = 163/399 (40%), Gaps = 69/399 (17%) Query: 187 DFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILL 246 DFF++ LN Q AV E +LL++AGAGSGKT V+ R +LL +G A E IL Sbjct: 4 DFFKK----SLNQFQYEAVTTIEGALLIIAGAGSGKTRVVTHRIAYLLLKGIAQKE-ILA 58 Query: 247 LAFGRKAAEEMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARH 304 L F KAA EM +RI++ L + ++ TFHA L +++ K + Sbjct: 59 LTFTNKAANEMKDRIKKILKSPLSNLMVSTFHAFGLFFLKENYKLLGYRKNFSIYDDNDR 118 Query: 305 ELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLA-SRLDRWVSLM 363 + E D+ L ++++ + L +SL Sbjct: 119 ISLLKEI------------------------------LLDEGLLNKKVSLNSLSNVISLF 148 Query: 364 RMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE 423 + ++ + + ++ L+ N+ DF LI + +L Sbjct: 149 KNGILTLNDLKEED---------------INIFRLYEERLRLYNSFDFDDLILKPKELLS 193 Query: 424 -----KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGA 478 + ++ +K++L+DEFQD S + + L + + L VGDD Q+IY + GA Sbjct: 194 NNSDIRNKYSKRYKYVLIDEFQDTSLIQYNFIRLLI---NHSNLCCVGDDDQSIYSWRGA 250 Query: 479 QMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAV 538 + F +++ + L+ YR I +VAN I N + +K L S K Sbjct: 251 SYNNMLQFEKDY-NAKEIKLEQNYRSAKNILDVANSVILNNKNRKEKTLWSSKMCSKVID 309 Query: 539 TLLDESQLD-------ALLDKLSGYAKPEERILILARYH 570 + E ++ +++ ++I +L R + Sbjct: 310 FFIFEDEIQESEFVASQIIELSKLEGFQSKKIGVLMRTN 348 Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 58/153 (37%), Gaps = 22/153 (14%) Query: 532 NGDKKAVTLLDESQLDALLDKLSGY-AKPEERILILARYHHMRPASLEKAATRWPKLQID 590 N + V ++ L + + +K + L+ + + + + + I+ Sbjct: 499 NPNSIKVAEYKYQNIEGFLSIIKNWESKQLGELRDLSSFLNYIVLQSNEVSEESENININ 558 Query: 591 FMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVAL 650 MT+H++KG + DYV + +++ +S ++ RR+ YVAL Sbjct: 559 LMTVHSAKGLEFDYVFFIAVEDNIIPHHRIIEDSELDLEEE-----------RRVFYVAL 607 Query: 651 TRARHRVWALFNKEN----------PSPFVEIL 673 TRA+ + + PS F+ + Sbjct: 608 TRAKDSLVITMANKRKKDRQIFEQLPSRFISEI 640 >UniRef50_C6NVE2 ATP-dependent DNA helicase Rep n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NVE2_9GAMM Length = 663 Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats. Identities = 99/398 (24%), Positives = 156/398 (39%), Gaps = 58/398 (14%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + LN Q AV +LVLAGAGSGKT V+ + L+ P I + F KAA Sbjct: 6 ADLNGPQREAVARVHGPVLVLAGAGSGKTRVITRKIVHLIQDHGVEPRHIAAVTFTNKAA 65 Query: 255 EEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 EM R+++ L +T TFH L L I++Q ++ + Sbjct: 66 REMKGRVQQSLEGRSARGLTISTFHRLGLEILRQDITQLGYRENFSVVDPGDSLTLVR-- 123 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 N + + LA + +S + G Sbjct: 124 -----------------------------NLLREMQGPSDLAESIQARISKAKNDGHGPE 154 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GR 426 +M + + +L + + ++ ALKA N+VD LI +L + R Sbjct: 155 DMP---------IRDRLDELAQRVYRPYQRALKACNSVDLDDLILLPTELLSRFAEAQER 205 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + +++LVDE+QD + + LL L K+ + L AVGDD Q+IY + GA Sbjct: 206 WQERIRYLLVDEYQDSNGAQYRLLQNLLKK--RQNLTAVGDDDQSIYSWRGAAADNLQRL 263 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLN-SLTNGDKKAVTLLDESQ 545 ++F + L+ YR RI + AN I NP +K L SL GD+ V + + Sbjct: 264 AQDFPDLRLIKLEQNYRSTGRILQAANHLIAHNPHLFEKKLWSSLGEGDRIQVIVARDET 323 Query: 546 LDA-------LLDKLSGYAKPEERILILARYHHMRPAS 576 +A L D+ + + ++ H RP Sbjct: 324 DEAEQVVNAILRDRFQRQGEYRDYAILYRSNHQSRPFE 361 Score = 76.7 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 25/141 (17%) Query: 543 ESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQA 602 E L + L P+ +L R + LE+ + + T+H +KG + Sbjct: 506 EELLAWMARLLEQEDGPKNLAELLNRLSVIH--ILERDEDDEERDVLRLSTLHGAKGLEF 563 Query: 603 DYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFN 662 V +VG++E P E+ EERRL YV +TRARH++ + Sbjct: 564 SRVFLVGVEEEL--LPHRNSETP-----------AQIEEERRLFYVGVTRARHKLSLSYC 610 Query: 663 KEN----------PSPFVEIL 673 + PS F++ L Sbjct: 611 RRRKRYGEAQAPEPSRFLQEL 631 >UniRef50_A7HBX8 UvrD/REP helicase n=7 Tax=Cystobacterineae RepID=A7HBX8_ANADF Length = 745 Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats. Identities = 107/400 (26%), Positives = 164/400 (41%), Gaps = 46/400 (11%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q V G+ +LV+AGAGSGKT L R LLA G ASPE ILLL F KAA+E Sbjct: 36 LNDQQIAVVEAGDGPILVVAGAGSGKTRTLTWRVARLLAEG-ASPESILLLTFTNKAAQE 94 Query: 257 MDERIRE--RLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M R+ E RL T IT TFH +A ++++ ++ ++ Sbjct: 95 MLRRVGEVCRLDTRQITGGTFHHVAHQLLREHGGELGYRKGYSILDREDSSDVMSAAIAD 154 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 C A G R++ ++ + L LA R ++V L Sbjct: 155 CG----LAVGARRFPKADVLIDLVSMAVNTQTPLADVLADRRPQFVPLT----------- 199 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISP---- 430 + + + + NA+DF L+ ++L + + Sbjct: 200 ---------------DDVLRVARRYAERKHELNAMDFDDLLLNWKILLAEREAVRRAVAG 244 Query: 431 -WKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 ++H+LVDE+QD + + ++ + ++ L VGDD Q+IY F GA + F + Sbjct: 245 RYRHVLVDEYQDTNRLQGDVVDLVAGEHR--NLCVVGDDAQSIYAFRGAHFANILEFEKR 302 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDK-KAVTLLDE----- 543 + + R DL YR +I +AN I N Q +K L S+ AV E Sbjct: 303 YPDARRYDLTVNYRSTPQILGLANASIAANVRQFEKELTSVRPDGTLPAVVPCREVQQQA 362 Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATR 583 + + + +L P I +L R HH + A R Sbjct: 363 AFVAQRVLELRDEGIPLPEIAVLYRAHHHAMEIQFELARR 402 Score = 79.3 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 41/186 (22%), Positives = 71/186 (38%), Gaps = 26/186 (13%) Query: 502 YRFNSRIGEV-ANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPE 560 YR + + + + + PG+ + + D L+ L +L+ YA+ Sbjct: 492 YRKLAELLRALSRKPTAELPGEAIEKVIEGGYEDYLRAEFLNADSRVEDLRQLAEYARGY 551 Query: 561 ERI-LILARYHHMRPASLEKAATR-WPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFP 618 E LA + + E + P ++ ++H +KG + V +V L +G FP Sbjct: 552 EDTETFLAEISLLTELTAETVSEGGDPDEKMVLSSVHQAKGLEWRAVFVVWLSDGR--FP 609 Query: 619 AAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFN-----------KENPS 667 +A + + EERRL YVA TRA+ ++ + S Sbjct: 610 SA----------QALKDRDGEEEERRLFYVACTRAKDELYLTYPILAAPRDRERVVMKAS 659 Query: 668 PFVEIL 673 FVE L Sbjct: 660 RFVEEL 665 >UniRef50_Q3F0Y3 ATP-dependent DNA helicase pcrA n=2 Tax=Bacillus thuringiensis RepID=Q3F0Y3_BACTI Length = 653 Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats. Identities = 96/477 (20%), Positives = 180/477 (37%), Gaps = 68/477 (14%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN +Q RAV+ E +LVLAGAGSGKT VL R +LL +G P +IL + F K+A+E Sbjct: 13 LNSSQQRAVLTTEGRVLVLAGAGSGKTKVLTTRIAYLLQQG-VDPWRILAITFTNKSAKE 71 Query: 257 MDERIRER-LHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQC 315 M ER+ TFH++ I+ + + + + Q Sbjct: 72 MKERVTGMDSRASKSWIGTFHSICNRILSTNIHHLGM-DMFTLMDDTDQKALVKTAAVQL 130 Query: 316 SEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIA 375 + D+ + L S++ W + E I+ Sbjct: 131 GLEA-------------------------DKNIVYNLLSQISLWKN----------EAIS 155 Query: 376 SAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RFISP 430 + K ++ + + ++ N D+ L+ + + + + R+ + Sbjct: 156 PGQAQSNSTGDKEKLAVSHIYQKYEDLKAIHNYFDYDDLLLKTVHLFQNNPELLGRYQNL 215 Query: 431 WKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENF 490 ++++LVDEFQD + + L+ L +++ +F VGD Q+IY F A++ ++ + Sbjct: 216 FRYVLVDEFQDTNKIQFDLIEMLSQKHG--NIFLVGDADQSIYSFRSAKIENILSYQKIH 273 Query: 491 GEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTN-GDKKAVTLLDESQLDA- 548 E + L YR I +N + N +L++ S++ GD V +++ +A Sbjct: 274 PETQLILLQENYRSTQNIVNASNSLVGNNKMRLEREAFSVSGVGDDIHVFRFNDASREAD 333 Query: 549 -----LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQAD 603 +++ + +L R + +I T + ++ Sbjct: 334 FVARMIVNMKKATQCDWKDFAVLYRMNFQSKHLELALRDENIPYKIVGTTSFYDR-KE-- 390 Query: 604 YVIIVGLQEGSDGFPAAARESIMEEALLPPVED---------FPDAEERRL-MYVAL 650 I L + +E + P + A ERR+ +VAL Sbjct: 391 ---IKDLVSYIRASHNLTDDYALERVINVPSRKIGKTTIEKIYAFAHERRIPFFVAL 444 Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 62/167 (37%), Gaps = 35/167 (20%) Query: 521 GQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKA 580 GQ K + L D ++ +K + +L+ Sbjct: 500 GQFDKEKEEDETRIENVTHLRDYARHWDAQEKEINSLA-----------QFVSEITLDGD 548 Query: 581 ATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDA 640 + + + ++H++KG + ++GL++ FP + + + Sbjct: 549 SDEDEEDFVTLTSVHSAKGLEWPETFVIGLEDDV--FPHYRSKQKLSDL----------E 596 Query: 641 EERRLMYVALTRARHRVWALFN------------KENPSPFVEILKN 675 EERRLMYVA+TRA R++ + ++ PSPF+ + + Sbjct: 597 EERRLMYVAMTRAGKRLYLTHSAFKYEYGSQKPIRQKPSPFLGEIPD 643 >UniRef50_C3RQ43 ATP-dependent DNA helicase n=4 Tax=Bacteria RepID=C3RQ43_9MOLU Length = 714 Score = 305 bits (781), Expect = 3e-81, Method: Composition-based stats. Identities = 85/392 (21%), Positives = 148/392 (37%), Gaps = 53/392 (13%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q A + L ++AGAGSGKT V+ R +L+ P +IL + F KAA E Sbjct: 7 LNKNQKEAATYLDSHLRIIAGAGSGKTRVVTYRIAYLIDEIGVDPRKILAITFTNKAANE 66 Query: 257 MDERIRERLHTEDI--TARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M ERI L + T H+L + I+++ + S + I Sbjct: 67 MKERITSLLGPHALGSLVCTIHSLCVRILRRHINVINYPSNFMIMDEEDQKALIK----- 121 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 K + + S+ + + A + Sbjct: 122 --------KIYNNLDIDAKTISIKSM---------------------IASISNYKMANID 152 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRFIS 429 E+ F IK A + K + + +DF L+ +A+ I E ++ Sbjct: 153 PERAMELAGQFQGEIKK-AKVYKEYLEYQENHFMLDFDDLLLKAVYIFENYPDVLEKWQH 211 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 +++I VDEFQD+ L+ + + VGD Q IY F GA ++ F ++ Sbjct: 212 KFQYIHVDEFQDVGNIEYRLVKLMSQDAIT---CVVGDPDQTIYSFRGANVNYILDFDKD 268 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL---DESQL 546 F + LD YR I ++N I++N +L+K L + G + + + ++ + Sbjct: 269 FKPCKTVILDQNYRSTGNILNISNSLIRKNRNRLEKDLYTEATGGSEVIHYMGKSEQEEA 328 Query: 547 DALLDKLSGY-----AKPEERILILARYHHMR 573 D + ++ IL R +++ Sbjct: 329 DYICSQIEKIISEVDGVNYRDFAILYRANYLS 360 Score = 91.7 bits (226), Expect = 8e-17, Method: Composition-based stats. Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 22/151 (14%) Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQAD 603 + L + + I + Y + + + M+IH +KG + D Sbjct: 501 DNIHELQRSIYEFQNQNPDIATIENYLQEISLYTDNDNLDDGQY-VSLMSIHMAKGLEFD 559 Query: 604 YVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWAL--- 660 YV ++GL EG FP+ S +E L EERRL YVA TRAR +++ Sbjct: 560 YVFVLGLSEGI--FPSFRALSESDEGL---------EEERRLAYVAFTRARKQLFLTDSE 608 Query: 661 ---FNKENP---SPFVEILKNLDVP-VARKP 684 F ++P S F++ + + + V KP Sbjct: 609 GFSFVTDSPKISSRFIDEIGSEGIKHVGTKP 639 >UniRef50_B0DAK6 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0DAK6_LACBS Length = 1055 Score = 305 bits (781), Expect = 4e-81, Method: Composition-based stats. Identities = 92/412 (22%), Positives = 159/412 (38%), Gaps = 47/412 (11%) Query: 195 SPLNPAQAR-------------------AVVN-GEHSLLVLAGAGSGKTSVLVARAGWLL 234 + LN AQ R AV E L +LAG GSGKT VL +R L+ Sbjct: 7 NSLNDAQLRGQTRPSISVIILLTRTTLVAVKYWPETPLQILAGPGSGKTKVLTSRIAHLI 66 Query: 235 ARGEASPEQILLLAFGRKAAEEMDERIRERLHTE---DITARTFHALALHIIQQGSKKVP 291 P I + F KAA EM ER+ + + E + TFHAL +++ + V Sbjct: 67 LNHHLPPFSICAVTFTNKAANEMRERLTKLIGKERTSQLRMGTFHALCARFLRKYAHLVK 126 Query: 292 IVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRR 351 + A + I K + ++Q + + ++ Sbjct: 127 LAENFTVCDAEESKKIIQALLK-------PYTAYLASENLDLQPGRVVSSISKAKSKEQS 179 Query: 352 LASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDF 411 + L+ + R + EE + + +++ + ++ LK NA+DF Sbjct: 180 GSVFLEEVIKAERRIRQRNGLPLGDDVEEKKTI----DRIIGEIFLEYEKTLKRNNALDF 235 Query: 412 SGLIHQAIVILEKGRFISPW-KHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQ 470 L+ + + K W +HILVDEFQD + + L+ AL + VGD Q Sbjct: 236 DDLLTYGVKLFTKNDETVIWCRHILVDEFQDTNITQYKLMRALAIAR---CVTIVGDPDQ 292 Query: 471 AIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKP-LNS 529 +IY + A++ + +F + E+ L+ YR + I + + I Q+ +++K S Sbjct: 293 SIYGWRSAEVGNLSKMRRDFPDTEQVLLEENYRSTAAILKASLAIISQDKSRIQKSLHTS 352 Query: 530 LTNGDKKAVTLLDESQLDALLDKLS--------GYAKPEERILILARYHHMR 573 NG + + +A + G A +IL R++ + Sbjct: 353 HPNGFTPVLYQVQTEHEEAAFIAIEMKRLVAHMGGALNWGDFVILLRFNALS 404 Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 26/103 (25%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 K ++ T H++KG + V+I + + + F AEERR Sbjct: 613 NKDKVTISTCHSAKGLEWPVVMIPSVDQNTFPF----------------YRSEDTAEERR 656 Query: 645 LMYVALTRARHRVWAL----------FNKENPSPFVEILKNLD 677 L+YVA TRA+ ++ + S F+ + N + Sbjct: 657 LLYVACTRAQSLLYVSRATTRMVAGETKSKELSEFISSVLNDN 699 >UniRef50_B2IL96 UvrD/REP helicase n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IL96_BEII9 Length = 730 Score = 305 bits (781), Expect = 4e-81, Method: Composition-based stats. Identities = 88/399 (22%), Positives = 160/399 (40%), Gaps = 37/399 (9%) Query: 191 QVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFG 250 V + L P Q A +++VLAGAG+GKTS L +A S +IL + F Sbjct: 63 TVLTQGLTPRQIEAASAP-GAVVVLAGAGTGKTSTLTCAVVHRIAVEGLSASRILAVTFT 121 Query: 251 RKAAEEMDERIRERLHTEDI--TARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFI 308 KAA EM +RIR L TFH L ++ + + E A I Sbjct: 122 NKAASEMSDRIRAALQGGSTPSWLGTFHGLGARQLRAEPEVAGLRPNFEILDADDSRRLI 181 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 + + + + + E + + +R+ +++ ++ L+ Sbjct: 182 ------------------KRIMQSLNLNTDEQDNESGPEPIKRMINQISKFKDLLLSPDE 223 Query: 369 AQA---EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG 425 A A + IA A + + A + ++ L+ +N+ DF L+ L + Sbjct: 224 APAYVQKKIAEANAIGEPIHPASLFNAARIYALYQQRLRDQNSADFGDLLLWPTRALLRD 283 Query: 426 -----RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQM 480 R+ + IL DE+QD++ + L AL ++ + +F VGDD QAIY + GA + Sbjct: 284 AAYRTRWARRFDCILADEYQDVNYAQYQWLRALAFEHHR--IFCVGDDDQAIYGWRGADI 341 Query: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL 540 + F ++F + L+ +R I AN I ++P +L K L + + + Sbjct: 342 TYIRRFTQDFPQASVIRLEENFRSTGAILASANAVIARDPHRLGKTLFTNKGYGQPIEVV 401 Query: 541 LD---ESQLDALLDKLS---GYAKPEERILILARYHHMR 573 + + +++++ + IL R + Sbjct: 402 AYRYCDGEAHGIVEEIKKRHAEGVDFAEMAILYRNNFFS 440 Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 22/94 (23%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 + ++ MT+H SKG + ++V + G ++G FPA + EERR Sbjct: 618 EEGRLKLMTLHKSKGLEFEHVFLPGWEDGI--FPAGNSD---------------LDEERR 660 Query: 645 LMYVALTRARHRVWALFNKEN-----PSPFVEIL 673 L YVA+TRA+ R + + PS F+ + Sbjct: 661 LAYVAITRAKRRAAITYCEYRRGLADPSSFIADI 694 >UniRef50_C5BBB0 ATP-dependent DNA helicase Rep, putative n=2 Tax=Edwardsiella RepID=C5BBB0_EDWI9 Length = 726 Score = 305 bits (780), Expect = 5e-81, Method: Composition-based stats. Identities = 95/412 (23%), Positives = 152/412 (36%), Gaps = 54/412 (13%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q +AV LVLAGAGSGKT V+ + L+ I + F KAA E Sbjct: 54 LNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRVCGYQARHIAAVTFTNKAARE 113 Query: 257 MDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 M ER+ + L + TFH L L II++ K + + S + + + Sbjct: 114 MKERVAQTLGRKEARGLMISTFHTLGLEIIKREYKALGMKSNFSLFDDQDQLALLTDLTE 173 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 + EK D+ ++L + + W + Sbjct: 174 RWLEK--------------------------DKTQLQQLIATISNWKND----------- 196 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RFI 428 + + S R +L A + LK+ N +DF LI ++L + R+ Sbjct: 197 LIDPAQAAAQARSARERLFADCYGLYDTQLKSCNVLDFDDLILLPTLLLRRDPEVRERWQ 256 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 +++LVDE+QD + + L+ L S+ VGDD Q+IY + GA+ E Sbjct: 257 QRIRYLLVDEYQDTNTSQYELVKLLV--GSRARFTVVGDDDQSIYSWRGARPQNLVLLKE 314 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDA 548 +F + L+ YR + RI + AN I NP +K L S + + ++ Sbjct: 315 DFPALQVVKLEQNYRSSQRILKAANILIANNPHVFEKRLFSELGYGEPLKVITANNEDHE 374 Query: 549 LLDKLSGYAKP-------EERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 + IL R +H + +I T Sbjct: 375 AERVVGELIAHHFIHKTAYSDYAILYRGNHQSRVFEKMLMQNRIPYKISGGT 426 Score = 92.1 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 37/145 (25%), Positives = 56/145 (38%), Gaps = 23/145 (15%) Query: 543 ESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQA 602 + D L G E L +E+ + Q+ MT+HASKG + Sbjct: 557 NQLFGWMTDMLQGSDLDEPMTLTQVVNRFTLRDMMERGESEEEADQVQLMTLHASKGLEF 616 Query: 603 DYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFN 662 YV +VG++EG ++ E ++ EERRL YV +TRA+ + Sbjct: 617 PYVYLVGMEEGLLPHQSSIDEDNVD-------------EERRLAYVGITRAQKALVFTLC 663 Query: 663 KEN----------PSPFVEILKNLD 677 +E PS F+ L D Sbjct: 664 RERRQYGELMRPEPSRFLLELPQDD 688 >UniRef50_C2KQX4 Possible UvrD/REP helicase n=3 Tax=Mobiluncus RepID=C2KQX4_9ACTO Length = 569 Score = 305 bits (780), Expect = 5e-81, Method: Composition-based stats. Identities = 119/528 (22%), Positives = 199/528 (37%), Gaps = 88/528 (16%) Query: 179 EAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGE 238 + +L + ++ L+P+Q + +L VLAGAG+GKT + R + + G Sbjct: 56 KKLLETPRNDQPEMLLEQLDPSQREVATHQHGALCVLAGAGTGKTRAITYRIAYGVRTGA 115 Query: 239 ASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLEN 298 + E IL L+F +KAA EM ER+ L + RTFH+ AL + +V L Sbjct: 116 VAAENILALSFTQKAAGEMRERLTG-LGVPGVETRTFHSAALAQARFFWPQVVGGEILRV 174 Query: 299 DTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDR 358 + + A R +AQ + L E++W+ D+ R A R+ Sbjct: 175 MSGKASLVTAAAARLGLDPSRAQVRD----LAGEIEWAKVSLLAPDEYVEAARAAGRMG- 229 Query: 359 WVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQA 418 + + + +A L A++ A+DF ++ Sbjct: 230 -------------------------VANLNPERIADLAAAYEEVKAEAQALDFEDILLVC 264 Query: 419 IVILEKGRF-----ISPWKHILVDEFQDISPQR-AALLAALRKQNSQTTLFAVGDDWQAI 472 +L++ + +++ +VDE+QD+SP + LL L + L VGD Q I Sbjct: 265 AGMLDEREDVLRAVQARYQYFVVDEYQDVSPLQNYLLLRWL---GHRRDLAVVGDAAQTI 321 Query: 473 YRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSL-- 530 Y F+GA S T F + E + +L YR ++ +AN+ + +PL Sbjct: 322 YSFAGATPSFLTDFTRGYPEAKVVELTRDYRSTPQVVGLANQVLADAKDAAGRPLGGTVQ 381 Query: 531 ---TNGDKKAVTLL---DESQLDALLDK----LSGYAKPEERILILARYHHMR---PASL 577 D V D+ + + K L + I IL R + L Sbjct: 382 LVSQREDGPDVQWFIAEDDQTEASTVAKRSWHLMKQGTNPKDIAILFRTNSQAGLFGTEL 441 Query: 578 EKAATRW--------------------PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGF 617 + + P+ I ++H++KG + + V +VG EG Sbjct: 442 ARMGLPYVVKDQVKSGFEADGASKDSIPREAITLASLHSAKGLEWEAVFLVGASEGLLP- 500 Query: 618 PAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN 665 + D EERRL YV +TRAR + + K Sbjct: 501 ------------INLSTTDAQIEEERRLTYVGITRARSLLTISYAKGK 536 >UniRef50_B3PNG5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PNG5_MYCA5 Length = 726 Score = 305 bits (780), Expect = 5e-81, Method: Composition-based stats. Identities = 86/409 (21%), Positives = 152/409 (37%), Gaps = 55/409 (13%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 ++ + LN Q AV+ + +L ++AGAGSGKT VL + +L+ SP IL L F Sbjct: 2 KKNDFDSLNEQQKSAVIFTDGALRIIAGAGSGKTRVLTYKIAYLIENRNVSPGDILALTF 61 Query: 250 GRKAAEEMDERIRERLHTED--ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 KAA EM +R L + T TFH+L I++ + + + + Sbjct: 62 SNKAANEMRDRAYGALEKTNEYPTVSTFHSLCARILRSEIHNFDYPNDFQILDESDQKQV 121 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 + + +AQ + S + + + Sbjct: 122 LKIVYTELGISQAQ-------------------------YTFGSIISFIQNQKNNL---- 152 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK--- 424 APE++ + K+++ L +++DF L+ + Sbjct: 153 --------VAPEDLLADEDSAKDPRTLIYKSYQERLNNAHSLDFDDLLVFVYRLFYDPKF 204 Query: 425 ----GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQM 480 ++ +K++L+DEFQD S + ++ L + VGD Q IY + A + Sbjct: 205 EEISHKWSKRFKYLLIDEFQDTSELQYKIVKILAGSG---NITVVGDPDQTIYSWRNADI 261 Query: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKA--- 537 ++ F ++F E L+ YR +I AN I N +L K L + + Sbjct: 262 NIIMNFDKDFPEAVTIKLEQNYRSTKKILNAANNLISYNKFRLDKKLFTDNEEGEDIDFY 321 Query: 538 VTLLDESQLDALLDKLSGYAKPE---ERILILARYHHMRPASLEKAATR 583 +E++ + K+S + + I IL R A E Sbjct: 322 CGFSEEAEARKIASKISELKRKRVQLKNIAILFRISSYSRAIEEALINE 370 Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 16/100 (16%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESI----------MEEALLPPVEDFP 638 + MTIH +KG + DYV +VGL E A S EE L E+ Sbjct: 554 VSLMTIHNAKGLEFDYVFVVGLSEDIFPLRRAITISPKFDFTYLPFEKEEELQKQPENIE 613 Query: 639 D-AEERRLMYVALTRARHRVWALFNKEN-----PSPFVEI 672 EERRL YVA+TRAR +++ + PS F++ Sbjct: 614 GLEEERRLAYVAMTRARTKLFLSYAVNRRGLNKPSRFLKE 653 >UniRef50_Q2RLV0 UvrD/REP helicase n=2 Tax=cellular organisms RepID=Q2RLV0_MOOTA Length = 1232 Score = 304 bits (779), Expect = 6e-81, Method: Composition-based stats. Identities = 86/336 (25%), Positives = 138/336 (41%), Gaps = 42/336 (12%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q AV ++V+AG G+GKT LV R +L+ +P +I + F KAA E Sbjct: 536 LNPEQQSAVTAATGPVVVIAGPGTGKTRTLVYRLAYLIKERGVAPGEIAAVTFTNKAAAE 595 Query: 257 MDERIRERLHTED----ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 + +R+ + L D +T TFH++ L ++Q P A+ + Sbjct: 596 IRQRVADLLGDRDGMESLTVGTFHSICLDLLQSSLTGSPG----------------ADLQ 639 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 + R + +E ++ RR L R +SL++ G Sbjct: 640 GKPVGTTDTPASPRLTVVDEADAREILAGVLAEKGTGRRGLPGLQRRISLLKSRG----- 694 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVI--LEKG----- 425 ++ +PE DL P+ +A++ L A +D+ ++ +A+ + L Sbjct: 695 LLPDSPEVPADLR--------PIYRAYQERLAAYGVLDYDDILLKALELPALRPEGAPAF 746 Query: 426 RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 + P+ H+LVDEFQD++ + L+ LF +GD QAIY F GA Sbjct: 747 QGPVPFTHLLVDEFQDVNAVQYRLVKKWTGDGK--NLFVIGDPDQAIYGFRGADYRFFGQ 804 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPG 521 E+F L YR I A + NPG Sbjct: 805 LLEDFPAARVFRLTRNYRSTPVILRAAAAVVAHNPG 840 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 55/144 (38%), Gaps = 21/144 (14%) Query: 540 LLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKG 599 LLDE + LL + P+ + + MT+HA+KG Sbjct: 1069 LLDEPSISRLLRVAERF--PDLSAFLRGVVLAGEADHERPGNNGASPEVVTLMTLHAAKG 1126 Query: 600 QQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWA 659 + V I G+++G ++E + AEERRL YV +TRAR + Sbjct: 1127 LEFPAVFIAGVEDGLL---------PLKEGPGVTLSPEEMAEERRLFYVGMTRARELLVL 1177 Query: 660 LFNKEN----------PSPFVEIL 673 + ++ PSPF+ + Sbjct: 1178 VSSRRRELRGTVVPAEPSPFLGEI 1201 >UniRef50_P57654 ATP-dependent DNA helicase rep n=4 Tax=Buchnera aphidicola RepID=REP_BUCAI Length = 645 Score = 304 bits (779), Expect = 7e-81, Method: Composition-based stats. Identities = 99/410 (24%), Positives = 168/410 (40%), Gaps = 54/410 (13%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN +Q AV L+LAGAGSGKT V++ + +L+ + P+ I + F KAA Sbjct: 2 SLNFSQKNAVELTNGPCLILAGAGSGKTKVIINKIIYLINHCQYEPDNIAAVTFTNKAAY 61 Query: 256 EMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM R+ + L+ + I TFH+L L II++ + + + L + + Sbjct: 62 EMRIRLSKYLNIPEIKKIIISTFHSLGLEIIKKEIDALELNNNFTLLDEKDQILLLKKIC 121 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 K+ + Q L ++L + W + + Q + Sbjct: 122 KKEIKNNIQ--------------------------LLKKLNFMISYWKN--KFLTPLQVQ 153 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RF 427 ++A + +E K A + + + L N +DF LI ++L+ R+ Sbjct: 154 LLAKSSQE---------KDFAYVYEQYTNYLYKANILDFDDLICMPTLLLKNNKKIKIRW 204 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 ++LVDE+QD + + L+ L +NS TL VGDD Q+IY + GA Sbjct: 205 QKKISYLLVDEYQDTNNSQYELIKMLANKNSDFTL--VGDDDQSIYSWRGANPQNIFLLK 262 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL---DES 544 ++F + ++ YR + RI + AN I N L+K L S L+ +E+ Sbjct: 263 KDFPNLKIIKMEHNYRSSGRILKAANSLIANNIHYLEKKLFSQLKYGNLIKVLIGKNEEN 322 Query: 545 QLDALLDK-LSGYAK---PEERILILARYHHMRPASLEKAATRWPKLQID 590 + ++ K +S YAK IL R ++ + I Sbjct: 323 EAQKIVKKIISQYAKKKIKYRDFAILYRGNYQSRILEKALIKENIPYNIS 372 Score = 89.0 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 23/119 (19%) Query: 575 ASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPV 634 L+ + + ++ MT+HASKG + V I+G+ EG + +E Sbjct: 538 DILDDNIIKEQQDRVQLMTLHASKGLEFPAVFIIGMCEGILPNQKSIDNDNIE------- 590 Query: 635 EDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVARK 683 EERRL YV +TRA+ +++ + + PS F+ L D+ +K Sbjct: 591 ------EERRLTYVGITRAKKQLFFTYCYKRTQYGQILDMLPSRFLFELPQEDLKWEKK 643 >UniRef50_Q5WF16 UvrD/REP family ATP-dependent DNA helicase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WF16_BACSK Length = 763 Score = 304 bits (778), Expect = 9e-81, Method: Composition-based stats. Identities = 118/509 (23%), Positives = 202/509 (39%), Gaps = 71/509 (13%) Query: 103 LRQQLDLIATRTGENKWLTREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAW 162 + Q+ I +G+N+ REQ +Q RQA S R AW Sbjct: 55 IHQKPSFIHPPSGDNR--CREQVEAFEQA-RQAESQTAATTAHGFRLPQRRAVLNTTPAW 111 Query: 163 -----LKDIESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAG 217 L ++ + + + Y + + L+ AQ +AV + + LL+LAG Sbjct: 112 KAPLVLSNVAPFTVPASTKQMA--MEGYREQLTKA-GLTLDDAQWKAVKHIDGPLLLLAG 168 Query: 218 AGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDI-----TA 272 AG GKT VL ARA ++++ P ++ L+ F KAA+EM ER+ E E + Sbjct: 169 AGCGKTRVLTARAAYMISEANIHPNKMALVTFTAKAAQEMRERMTEYPGIEPMFAQSLLI 228 Query: 273 RTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEE 332 RTFH+L ++ SKL G T+ Sbjct: 229 RTFHSLFYTMLVHADPSKWHGSKLIK------------------------SGQELLKTQG 264 Query: 333 MQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLM 392 + E F D+ A+++ W + MIA E D F ++ L Sbjct: 265 RALGLDESEFPYDQA-----ATQISWWKNH----------MIAPEHVETTDPFEEKAAL- 308 Query: 393 APLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RFISPWKHILVDEFQDISPQRA 447 L + ++ AL+ DF + + +L++ R+ + ++L+DEFQDI+P + Sbjct: 309 --LYEHYEKALRETGRFDFDDMQLGCLYVLQENNRLLQRYQERFAYLLIDEFQDINPVQF 366 Query: 448 ALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSR 507 ++ L Q + VGDD Q+IYRF G+ +F ++ E + L YR + Sbjct: 367 EIVKLLAM--PQRNICVVGDDDQSIYRFRGSDPRFIRSFTAHYPEAKTIHLVENYRSSHP 424 Query: 508 IGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL---DESQLDALLDKLSGYAKPE---E 561 I ANR I +N +L+K L + D+ +E + +++++ Sbjct: 425 IIASANRVIAENRTRLEKTLVAQHTSDQLPYLFFPYNEEEEATMIVEEIKRLIGKGICPS 484 Query: 562 RILILARYHHMRPASLEKAATRWPKLQID 590 I +L R A +++ ++ Sbjct: 485 EIAVLYRTSTSVRALVDRLVDTTLPFSLE 513 Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 33/89 (37%), Positives = 43/89 (48%), Gaps = 13/89 (14%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 I +TIH SKG + +V IVG EGS P E +D P EERRLMY Sbjct: 679 SIQLLTIHRSKGLEFSHVFIVGAVEGS--LPHDYALDAWRE-----GDDGPLQEERRLMY 731 Query: 648 VALTRARHRVWALFN------KENPSPFV 670 VA+TRA+ + + +P+ FV Sbjct: 732 VAMTRAKKELAISAPVHYRGKRAHPTRFV 760 >UniRef50_Q6MND7 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MND7_BDEBA Length = 672 Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats. Identities = 97/422 (22%), Positives = 169/422 (40%), Gaps = 61/422 (14%) Query: 187 DFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILL 246 D+F+ LNP Q +AV + LL+LAGAGSGKT+VLV+R G L++ A ++I + Sbjct: 2 DWFK-----GLNPEQQKAVKHNFGPLLILAGAGSGKTTVLVSRTGRLISERVAQAQEICV 56 Query: 247 LAFGRKAAEEMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARH 304 L F KAA E+ R+ +L + + A TFH+ L I+++ K + + Sbjct: 57 LTFTNKAARELKHRVGAKLGSSGSGMWAGTFHSFGLQILRRFHKHAGLSPYFGIVDQSDC 116 Query: 305 ELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMR 364 + + K A ++ ++ R Sbjct: 117 NAIVKDLIKDIKNSGKDKFD----------------------------ADKILNMINDRR 148 Query: 365 MHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK 424 Q E F + +++ L + L+ VDF GL+ + I + ++ Sbjct: 149 TGMAPQTEA-----------FDEYHEMVEVLTPKFTKRLEHLGVVDFEGLLIKPITLFKE 197 Query: 425 G-----RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQ 479 + + ++VDEFQD + + L+A + K S + VGDD Q+IY + GA+ Sbjct: 198 NPEILEKVQGMFTQVMVDEFQDTNRLQMDLIAQIVK--SHNNIAVVGDDDQSIYGWRGAE 255 Query: 480 MSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKK---PLNSLTNGDKK 536 + F + F E L+ YR ++ I VAN I +N + K P + G Sbjct: 256 VKNILNFPQEFTPCEVIKLERNYRSSAEILAVANAAISKNKNRHGKILRPQVAEDTGQLP 315 Query: 537 AVTLLD--ESQLDALLDKL---SGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDF 591 + +LD E + + ++ ++ + + +L R + I Sbjct: 316 ELFILDREEDECEFVVTEILNFQRQGYSYKDMAVLYRSNTQGGLIESSLRRANVPYHISG 375 Query: 592 MT 593 T Sbjct: 376 GT 377 Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 28/120 (23%) Query: 578 EKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDF 637 + + + ++ MT+HASKG + VI+ GL+E + Sbjct: 542 DDLSEEELENKVQLMTLHASKGLEFPVVILAGLEEDLLPHKNLGSD-------------- 587 Query: 638 PDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDV---PVARKP 684 EERRL YV +TRA+ R+ ++ PS F+ L P+ +P Sbjct: 588 -IDEERRLFYVGVTRAKKRLVMSRCQQRKKNGAVRPVAPSRFLLELPKELYTEFPLGARP 646 >UniRef50_B9XNK2 UvrD/REP helicase n=2 Tax=Verrucomicrobiales RepID=B9XNK2_9BACT Length = 692 Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats. Identities = 98/408 (24%), Positives = 156/408 (38%), Gaps = 46/408 (11%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV LV+AGAGSGKT L R G+LL +G ++ILLL F KAA E Sbjct: 24 LNEQQHAAVTAPPGPSLVIAGAGSGKTRTLTFRVGFLLEQG-IPADRILLLTFTNKAARE 82 Query: 257 MDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M R+ + L + + TFH++ I++Q + + Sbjct: 83 MMRRVSDLLGQDLPSLWGGTFHSIGNRILRQHAPLLGYQRDFSIMD-------------- 128 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 + AK E + V F + L + L+ S I Sbjct: 129 ----REDAKDLVDACVAEAEIDVKATRFPKADVLADIFSLGLNTQRS------------I 172 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRFIS 429 + D F +A + + + K+ NA+DF L+ + +L+ + + Sbjct: 173 PEVLAQEYDYFENLAPQIADIKERYILRKKSTNAMDFDDLLELWLKLLKEHPEVREHYQR 232 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 ++ ILVDE+QD + ++ L+ L ++ + VGDD Q+IY + GA F E Sbjct: 233 RFQFILVDEYQDTNALQSELIDLLAARHH--NVMVVGDDAQSIYAWRGANFQNIIKFPER 290 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL------LDE 543 + E ++T YR I +AN I N Q +K L K V + Sbjct: 291 YSEARVYKIETNYRSTPEILNLANAAISANVKQFEKQLTPARKSGLKPVLVPCMTASEQA 350 Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDF 591 S + + +L ++ +L R H + R I Sbjct: 351 SFVAQRMLELREEGVNMNQMAVLYRSHFHALELQLELTRRNIPFSITS 398 Score = 79.0 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 26/132 (19%) Query: 554 SGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEG 613 ++ EE + LA ++ + E A ++++ TIH +KG + D V I+ L +G Sbjct: 558 QQFSTTEEFLAQLALLSNLEAETDEPANNDNEQVKLS--TIHQAKGLEFDVVFIIMLCDG 615 Query: 614 SDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFN----------- 662 FP+A E RRL+YVA+TRAR+ ++ + Sbjct: 616 L--FPSARSLDTAEGEEEE----------RRLLYVAITRARNELYLSYPLIRMMPGGSGD 663 Query: 663 -KENPSPFVEIL 673 + PS F+ L Sbjct: 664 AMQQPSRFLSEL 675 >UniRef50_B0KVA6 Putative UvrD/REP helicase n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVA6_9BACT Length = 710 Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats. Identities = 86/339 (25%), Positives = 151/339 (44%), Gaps = 36/339 (10%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 + LN Q +AV + +LV+AGAG+GKT V+ R +L+ P++IL L F KA Sbjct: 8 KTELNEEQLKAVKHKSGPVLVVAGAGTGKTRVITERIRYLIKEKNVDPQEILALTFTEKA 67 Query: 254 AEEMDERIRER--LHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 A+EM +R+ + L E+ TFH+ A I+++ ++ I + + + L + + Sbjct: 68 AQEMVDRVGDIMPLGYEEPWVYTFHSFADRILKEKGIEIGIDPSYKILSPSDQWLLLRKN 127 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 K + G + S + ++S ++ + Sbjct: 128 LFDLKLKYFRPLG-----------------------NPTKFISAILTFISRLQDENVSPE 164 Query: 372 EMIA--SAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK----- 424 E++ D +R + ++ + ++ +A+DF LI I +L Sbjct: 165 ELLEFVKHSNYTSDEEKQRWEELSYIYSEYERLKIESSAMDFGNLIIWVIKLLNVRPNIL 224 Query: 425 GRFISPWKHILVDEFQDISPQRAALLAALRK----QNSQTTLFAVGDDWQAIYRFSGAQM 480 + + +KHILVDEFQD + + L+ L + S+ +L VGDD Q+IY+F GA + Sbjct: 225 AEYKNQFKHILVDEFQDTNYAQYELIKLLFPTKETKESERSLLVVGDDSQSIYKFRGAAV 284 Query: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQN 519 S F E++ + + L YR I + A + IQ N Sbjct: 285 SNILQFMEDYKDSKMITLLKNYRSTQEILDAAYKLIQNN 323 Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 10/94 (10%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLP---PVEDFPDAEERRL 645 I+ MT+H+SKG + V +V L G + E L+ P + EERRL Sbjct: 583 INLMTVHSSKGLEFPVVFMVNLVSGRFPTRNQGDTIEVPEELIKETLPTGNEHIQEERRL 642 Query: 646 MYVALTRARHRVWALFNKEN-------PSPFVEI 672 YV +TRA+ ++ K PS +++ Sbjct: 643 FYVGMTRAQKYLFMTLGKNYGGKRDTIPSGYLQE 676 >UniRef50_A4IYZ2 ATP-dependent DNA helicase/UvrD/REP helicase n=21 Tax=Francisella RepID=A4IYZ2_FRATW Length = 671 Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats. Identities = 95/394 (24%), Positives = 167/394 (42%), Gaps = 58/394 (14%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q +AV LLVLAGAGSGKTSV++ + +L+ + + IL + F KAA+E Sbjct: 5 LNQQQQQAVKYIATPLLVLAGAGSGKTSVIIEKISYLIEQLLYPAKSILAVTFTNKAAKE 64 Query: 257 MDERIRERLHTE---DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 M ER++ RL E + TFH+L L I+++ ++ + I + Sbjct: 65 MQERVKSRLDKEKSKGLMISTFHSLGLSILKKHFNELGYKKNFTLFDSHDSLALIYDIA- 123 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 +D+ +L ++ AS + +S + ++ Sbjct: 124 -----------------------------YDEYQLPKQNASFIQAKISFWKSALLTPDQV 154 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FI 428 E + A + + ++ LK+ N+ DF LI Q I + + Sbjct: 155 KPKDELE---------EQAAFIYQEYQKYLKSYNSFDFDDLIFQPIQLFRNHSNIQKLWA 205 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 +++IL+DE+QD + + LL L + VGDD Q+IY + G++ E Sbjct: 206 DKFRYILIDEYQDTNESQYQLLKYLTL--GKNKFTVVGDDDQSIYAWRGSRPENLRHLQE 263 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDK--KAVTLLDESQL 546 +F + + L+ YR RI VAN+ I+ N K L S + + K ++L+++ Sbjct: 264 DFADLKVIKLEQNYRSTGRILNVANKLIENNSHIFDKKLWSNKDYGEQIKVISLINDEDE 323 Query: 547 DALL------DKLSGYAKP-EERILILARYHHMR 573 + D++ +K + +LI + Y Sbjct: 324 AQFIASDIFFDRVKTKSKNSDYAVLIRSNYQAYL 357 Score = 95.9 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 66/184 (35%), Gaps = 23/184 (12%) Query: 504 FNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERI 563 + + N FI + +S + + ++++L + Sbjct: 471 SVQELKNIINSFIDNISYRQWLIDSSSSEKQAEFRYANIIEVTKWIVNQLEDESYNGLES 530 Query: 564 LILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARE 623 L + L++ Q+ +T+HASKG + V I+G++EG + + Sbjct: 531 LATVLNKMLLIDILDRDNEDKNDNQVQIITMHASKGLEFKKVYIMGMEEGILPHQQSIED 590 Query: 624 SIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEIL 673 +E+ ERRL YVA+TRAR + K PS F++ L Sbjct: 591 DSIED-------------ERRLAYVAITRARENLTITMTKHRKKFGEKQVSVPSRFIDEL 637 Query: 674 KNLD 677 D Sbjct: 638 PETD 641 >UniRef50_B8FB90 UvrD/REP helicase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FB90_DESAA Length = 638 Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 100/420 (23%), Positives = 164/420 (39%), Gaps = 52/420 (12%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 LN +Q AV E +LV+AGAGSGKT L R L+ G A P +ILLL F RKA Sbjct: 8 EKDLNESQYEAVTTLEGPMLVIAGAGSGKTRTLTYRVARLVDSG-APPARILLLTFTRKA 66 Query: 254 AEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 +EEM R L +D+ TFH+ + ++++ + K+ E I Sbjct: 67 SEEMLRRAGVLLGMDCDDVAGGTFHSFSHQMLRRYAFKLGFDPGFVILDRPDCEALIDRL 126 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 +K+ KG R + + S+ + +++ L S + ++ Sbjct: 127 KKEL-----VPKGVRNFPRKGTVASIFSRSANTGMSVEKILFSEYNHFIPHK-------- 173 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFIS-- 429 ++ + + EN +DF L+ ++L I Sbjct: 174 ------------------DILDEMYTQYALTKSQENLMDFDDLLLHMRIMLATEPEIRDV 215 Query: 430 ---PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + +I+VDE+QD + +A +L L + VGDD Q+IY F GA F Sbjct: 216 IAKKYDYIMVDEYQDTNLIQADILRYL--GEGHQNVMVVGDDCQSIYGFRGANFENIMRF 273 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL--DES 544 + F + L+ YR + +V N+ ++Q + K L + G V + DE+ Sbjct: 274 PDVFPGTKIIRLEENYRSYQPVLDVTNKIVKQATRKYSKTLFTNLQGGAAPVLVSTRDEN 333 Query: 545 QLDAL----LDKLSGYAKPEERILILAR---YHHMRPASLEKAATRWPKL-QIDFM-TIH 595 + +L P I +L R L +A ++ K FM + H Sbjct: 334 SQSQFVVDEVKRLQSQDVPLREIAVLFRAGYQSFDLEVELTRAGIKFVKYGGFKFMESAH 393 Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 22/100 (22%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 P ++ TIH++KG + + V ++ +G FP+ +A+ E EE R Sbjct: 540 PPDRMVLSTIHSAKGLEWEAVFVIWTLDGR--FPSR-------QAVAKEGESL--EEELR 588 Query: 645 LMYVALTRARHRVWALFNKE-----------NPSPFVEIL 673 LMYVA TRA+ ++ + + PS F+E L Sbjct: 589 LMYVAATRAKKELFFVHPTDVFDAASMTYLYRPSRFLERL 628 >UniRef50_C9RM93 UvrD/REP helicase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RM93_FIBSS Length = 843 Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 84/397 (21%), Positives = 168/397 (42%), Gaps = 31/397 (7%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 V LNP QA A +L+LAGAGSGKT + + L++ + ++L + F Sbjct: 12 DSVLDKELNPEQAAAAKKINGPMLILAGAGSGKTRCITYKIAHLVSYHKIDSNRVLAVTF 71 Query: 250 GRKAAEEMDERIRERLHTEDI--TARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 KAA EM +RI++ L+ TFH++ ++K A + F Sbjct: 72 TNKAAREMKDRIQKLLNCRKPFTWMGTFHSV------CLKLLKLCLAKESVIKALGGKWF 125 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 A + + Q + ++ L +++ +++ S + R+ + + ++ Sbjct: 126 DANF--SIYDDDDQKRILKEILKDDLGDDYDVNEL-------KKVHSAISRFKNTV-LYK 175 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE---- 423 +A + + F+ + A A++ L NA+DF L+ + +L+ Sbjct: 176 NDKAVLQTPDVAALNAEFADEERK-ARYYAAYQKKLAESNAMDFDDLLFNTVRMLQMVPN 234 Query: 424 -KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + +++++VDE+QD + + LL L ++++ + VGDD Q+IY + GA + + Sbjct: 235 LAEQLRERFQYVVVDEYQDTNDVQYELLKLLINRDTK-NVTVVGDDDQSIYGWRGANIKI 293 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQN--PGQLKKPLNSLTNGDK-KAVT 539 FH +F L+ YR + I + A I N P +++K + S + V Sbjct: 294 IRNFHRDFAPVTIVKLERNYRSTANIVKGAGSVIAHNVRPAEMQKNVFSKEEAGELIHVR 353 Query: 540 LLDESQLDA--LLDKLSGYAKP-EERILILARYHHMR 573 ++ + +A + ++ + I R + Sbjct: 354 YFEDDRAEASNIAKTVAQAGPDFYAKTAIFYRTNAQS 390 Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 30/141 (21%), Positives = 54/141 (38%), Gaps = 16/141 (11%) Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQAD 603 + LD +++ + + + + A + + K + MTIH +KG + + Sbjct: 536 ANLDEMINAIREFDEEHPGATLDAFLQDISLLTDGDKKVDTSKGLVTLMTIHMAKGLEFN 595 Query: 604 YVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWAL--- 660 V + G + FP S++ A + EERRL YV TRA +++ Sbjct: 596 TVHLAGCDDEI--FPLVRGTSMLSMAEINE----QMEEERRLFYVGCTRAEKKLYLYHAE 649 Query: 661 -------FNKENPSPFVEILK 674 PS F++ L Sbjct: 650 RRFFQGNIRPFAPSRFLKELD 670 >UniRef50_C1E652 ATP-dependent DNA helicase n=2 Tax=Micromonas RepID=C1E652_9CHLO Length = 907 Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 106/412 (25%), Positives = 169/412 (41%), Gaps = 46/412 (11%) Query: 198 NPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEM 257 N Q A+V + VLAG GSGKT VLV R L+ P IL + F KAA EM Sbjct: 60 NDEQIAAIVAPVAPMKVLAGPGSGKTRVLVGRVTHLINELGVPPSHILCITFTNKAAREM 119 Query: 258 DERIRERLHTED---ITARTFHALALHIIQQGSKKV---PIVSKLENDTAARHELFIAEW 311 ER+ + E+ ITA TFH++A ++++ + + A + I + Sbjct: 120 RERLVASVGEENARQITAGTFHSVASRMLRKHVHLLDGYGRGNDFVIYDEADTKSIIRKI 179 Query: 312 RKQC--SEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 +KK + + +V D ++ R L D SL R Sbjct: 180 MVDVFMEDKKKADPALAKSRISAAKSAVDACVGMDGRRMARAL---CDTRPSLKRDP--- 233 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR--- 426 IRD F + L ++ L++ NA+DF L+ A+ +L Sbjct: 234 ----------YIRDQFPR-------LYDEYEANLRSSNALDFDDLLSAAVALLRTSEEAR 276 Query: 427 --FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 + W+H+LVDEFQD S + L+ AL + ++ +F VGD QAIY + GA+++ Sbjct: 277 LFYRQRWRHVLVDEFQDTSLSQYELIRALAAETAR--VFVVGDVDQAIYSWRGAEVANIR 334 Query: 485 -AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDE 543 F +F L YR + I + A I ++ + L+++ G K + E Sbjct: 335 TKFDSDFAGAGTVLLTKNYRSTATIVKAAQAVIGESRDRSPLELDAVRPGGKDVAVVATE 394 Query: 544 SQL------DALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 ++ + + P + I +L R H LE+A R + Sbjct: 395 DEIEEADFAAREAARAARSGVPLKDIAVLYRTHSQSRP-LEEAFIRAGVPHV 445 Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 20/100 (20%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + MT+HA+KG + D V+I G ++ F S + EE RL YV Sbjct: 664 VKLMTLHAAKGLEFDTVLITGCEDELIPFKRGDASS----------DAAEHDEEVRLFYV 713 Query: 649 ALTRARHRVWAL----------FNKENPSPFVEILKNLDV 678 LTRA+ +++ +PSPF+E+++ V Sbjct: 714 GLTRAKRKLFLCRAFKRQRFGRTVYADPSPFLEVIRESLV 753 >UniRef50_C6XGC2 DNA helicase II n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XGC2_LIBAP Length = 685 Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats. Identities = 86/359 (23%), Positives = 148/359 (41%), Gaps = 44/359 (12%) Query: 195 SPLNPAQARAVVNGEH-SLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 LN Q AV + LL+LAGAG+GKT+VL+AR L+ E P +IL + F +A Sbjct: 28 KGLNAQQTHAVTIPDDTPLLILAGAGTGKTTVLIARMLHLICHKEIPPSKILAMTFTNQA 87 Query: 254 AEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 +EM R+ L + +TFH+ I+++ + V + + +A I + K Sbjct: 88 IQEMKNRLACYLGEKIPRIQTFHSFCASILRKHGEVVGLPTDFAILDSAESRTIIKQLLK 147 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 D + + ++D W + G ++ Sbjct: 148 DLQID-------------------------DKDYDPHEVIEKIDYW----QNRGWNPKDI 178 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWK- 432 S+ ++ ++ + + L+ + DF GLI + I +L + + Sbjct: 179 PQSS-------LTEDAEIPKAIYIQYVAYLQKTKSCDFGGLIIKTIEVLHHPHVLKKYHE 231 Query: 433 ---HILVDEFQDISPQRAALLAALRKQNS---QTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 +I+VDE+QDI+ + LL L ++ + VGD+ Q IY + GAQ S F Sbjct: 232 KIPYIMVDEYQDINTPQYLLLRLLCQKEDSKQGARICCVGDENQCIYEWRGAQFSHILNF 291 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQ 545 ++F + L+ YR + I AN+ I N + K L + + A + SQ Sbjct: 292 QKDFKDANIIKLEQNYRSTTHILNTANKLISHNKQRFDKKLFTQRDCHDDAKVSIHVSQ 350 Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 39/104 (37%), Gaps = 28/104 (26%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 I MT+HA+KG + D V I G ++G + E +E ERRL YV Sbjct: 571 IQIMTLHAAKGLEFDTVFISGWEQGLLPHQLSINEGNVEG-------------ERRLAYV 617 Query: 649 ALTRARHRVWAL---------------FNKENPSPFVEILKNLD 677 +TRA+ + + S F+ L + Sbjct: 618 GITRAKKKCHLFYTINRRTHDFTRVERYQPSQVSQFLLELYDPS 661 >UniRef50_UPI0001C42BC3 ATP-dependent DNA helicase n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42BC3 Length = 785 Score = 301 bits (771), Expect = 5e-80, Method: Composition-based stats. Identities = 109/492 (22%), Positives = 193/492 (39%), Gaps = 63/492 (12%) Query: 119 WLTREQTSGVQQQIRQALSALPLPVNR-LEEFDNCREAWRKCQAW--LKDIESARLQHNQ 175 + Q + +L+ +PV R + N A + + +K I + H Sbjct: 70 YERESQKKQSDRTETSSLNGFKMPVRREISSSGNESSATDQWKPPEPIKAIPTFTAHHKS 129 Query: 176 AYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLA 235 + E T Y ++ + L+ Q A E LL+LAGAGSGKT VL RA ++L Sbjct: 130 GHEEY--TGYRAILKE-QGISLDDQQWNAATTTEGPLLILAGAGSGKTRVLTTRAAYMLT 186 Query: 236 RGEASPEQILLLAFGRKAAEEMDERIRERLHT-----EDITARTFHALALHIIQQGSKKV 290 SP+Q++L+ F KAA+EM ER+ + + TFH++ ++ Sbjct: 187 EKNYSPKQMILVTFTAKAAKEMKERMTIYPGVTKGALQQLVVGTFHSIFYRMLMHY---- 242 Query: 291 PIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQR 350 + + L +W+K K+A + + E F D+ L Sbjct: 243 ------DFEKWNSQHLLKWDWQKDQILKEAGR-----------EIDLDEKEFAYDQAL-- 283 Query: 351 RLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVD 410 +++ W + M+ + + I + A L K ++ ++ D Sbjct: 284 ---TQISWWKNHMQNPNEIKPKDI-------------WEERAAYLYKRYEQMRTSKRLFD 327 Query: 411 FSGLIHQAIVILEKG-----RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAV 465 F ++ +L R+ + ++ +DEFQDI+ + L+ L + ++ L V Sbjct: 328 FDDMLLGCYDLLTTNQALLERYQERFAYVSIDEFQDINKVQVELITLLTE--TKRNLCVV 385 Query: 466 GDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKK 525 GDD Q+IY F G+ F ++ E + C LD YR I E AN I N + K Sbjct: 386 GDDDQSIYAFRGSDPDYILNFKSDYPEAKVCVLDQNYRSTHPIVESANNVITTNKTRFNK 445 Query: 526 PLNSLTNGDKKAVTLL---DESQLDALLDKLSGYAKPE---ERILILARYHHMRPASLEK 579 L++ + V +E + +++ + K +L R + A E+ Sbjct: 446 QLHAQHTDENAPVLFFPYDEEEEATMIVNDIKSRIKNGAEPSDFAVLFRTNVTSRALFER 505 Query: 580 AATRWPKLQIDF 591 T + I+ Sbjct: 506 MVTSSLPISIES 517 Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 35/117 (29%), Positives = 48/117 (41%), Gaps = 13/117 (11%) Query: 564 LILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARE 623 + HM E K + +TIH +KG + +V I+G EGS P Sbjct: 657 AFIQHVDHMIAKQEEARKMPAEKTAVQLLTIHRAKGLEYKHVYILGANEGS--LPHDYAL 714 Query: 624 SIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN------PSPFVEILK 674 E +D P EERRLMYVA+TRA++ + S FV +K Sbjct: 715 DAWRE-----GDDKPLEEERRLMYVAMTRAKNTLAISVPTMRRGKRAHSSRFVREVK 766 >UniRef50_B3DUG1 ATP-dependent DNA helicase UvrD/PcrA n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DUG1_METI4 Length = 636 Score = 301 bits (770), Expect = 7e-80, Method: Composition-based stats. Identities = 86/410 (20%), Positives = 158/410 (38%), Gaps = 48/410 (11%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q +AV +LV+AGAGSGKT L R +L+ +G +P +ILL F KAA E Sbjct: 8 LNEEQKKAVTAPLGPILVIAGAGSGKTRTLTYRVAYLIEKG-INPGRILLATFTNKAARE 66 Query: 257 MDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M R+ ++T+ I TFH L I++ +K + + ++ Sbjct: 67 MLNRVDRLVNTDTSQIWGGTFHHLCHKILRNHAKTIGFEQNFTIIDREDSIQLLTGCIEE 126 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 + K+ F E L + +++ + + + + + Sbjct: 127 LNLKRG------------------NKLFPSPEALLEVFSLVVNKVKPIWKTLEESFSHLA 168 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FIS 429 + E + L ++ K D+ L+ + + ++ + S Sbjct: 169 IFSDE------------ITKLEYFYRERKKKLLVFDYDDLLFYTVKLFQEKENILKFYQS 216 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 +++ILVDE+QD S +A + L + + + + VGDD Q+IY + GA++ F + Sbjct: 217 YFEYILVDEYQDTSRIQADFIDLLGQSSQR--VMVVGDDAQSIYSWRGAEIENMLNFPKR 274 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAV--------TLL 541 + ++ T YR I +AN I+ N Q K L + ++ T + Sbjct: 275 YPSTVVINIKTNYRSTPEILALANAAIEGNQFQFPKELRAARKSLQEIKPQLLLCYSTAV 334 Query: 542 DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDF 591 + ++ + + IL R H + R +I Sbjct: 335 QSQVIAEFIEDFRKQGIEAKEMAILYRAHFHALEMQLELTRRKIPFEITS 384 Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 22/99 (22%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 + + TIH +KG + V I+ L EG + + E EERR Sbjct: 536 QRGGVRLSTIHQAKGLEWKVVFIIMLCEGLFPSNYSLNHPTLLE------------EERR 583 Query: 645 LMYVALTRARHRVWALFNKEN----------PSPFVEIL 673 L YVA TRA+ R++ + PS F+E L Sbjct: 584 LFYVAATRAKDRLFLCYPARRSFNNRQSTYFPSRFLEEL 622 >UniRef50_C9RKG0 UvrD/REP helicase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKG0_FIBSS Length = 803 Score = 301 bits (770), Expect = 8e-80, Method: Composition-based stats. Identities = 93/416 (22%), Positives = 154/416 (37%), Gaps = 30/416 (7%) Query: 193 ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 E S L+ Q AV E + V+AGAGSGKT L R +L+ SP IL + F K Sbjct: 17 ERSRLDKEQLEAVETTEGYVRVVAGAGSGKTRTLTHRYLYLVKEMGISPANILCVTFTNK 76 Query: 253 AAEEMDERIRERLHTEDI-TARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 AA EM +RIR L +D TFH + +++ + + + + Sbjct: 77 AAAEMKKRIRSILGGDDSGYISTFHGFCVQFLREEIHVLNYPKEFMILDEDDQKSLL--- 133 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 RK ++ K + + D A L V Sbjct: 134 RKAYADLGFSLKDLKISSVLDFVGGRKAN----DIGYVSLFAEHLADEVGASAAENAPAV 189 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GR 426 E E + +L + + + K A+DF LI + ILE + Sbjct: 190 EN--EKREHLVELADEAPDKWMAVYYRYLYEQKKNYALDFDDLILVTLYILENFPEKLDK 247 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + +++VDE+QDI Q+ L L + LF VGD Q IY + GA ++ F Sbjct: 248 WRKRMMYVMVDEYQDIDGQQYCLADLLSSYHK--NLFVVGDPDQTIYGWRGADINRILEF 305 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQL 546 + + L YR I +V + I+ N +++K L + G K V ++ Sbjct: 306 DQFHKGTKTILLQNNYRSTPSILKVPDAVIKNNKYRIEKVLRPVRAGGKTPVFYHAKNTR 365 Query: 547 D---ALLDKLSG----------YAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + +++++ + I +L R H + E + ++ Sbjct: 366 EEAKWIVERIQNAVQNSVKNGAGGVHYKDIAVLYRMHSQSRSVEEALMSESIPYKV 421 Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 47/208 (22%), Positives = 70/208 (33%), Gaps = 28/208 (13%) Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDE 543 F E L YR + V+ + + + K +GD+ + Sbjct: 523 KEFLSRSNVVEYVKLIEKYRSRYKDMRVS-ELLSKMLRETKYEEMLRLDGDEDRL----- 576 Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQAD 603 L L + + E L Y K ++ MTIH +KG + Sbjct: 577 DNLAELKQGILEFENYYEEDASLDEYLQNIVLFTNADEDSQEKDRVQLMTIHNAKGLEFP 636 Query: 604 YVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWAL--- 660 YV + GL EG FP ++ M EERRL YVA TRA + + Sbjct: 637 YVFVCGLNEGF--FPVKRVQNKM-----------QLEEERRLAYVAFTRAENVLCLSDAE 683 Query: 661 ------FNKENPSPFVEILKNLDVPVAR 682 PS F+ + ++ VAR Sbjct: 684 DGVAGESGSRYPSRFLLEMNMDELDVAR 711 >UniRef50_Q30TG3 UvrD/REP helicase n=8 Tax=Epsilonproteobacteria RepID=Q30TG3_SULDN Length = 682 Score = 300 bits (769), Expect = 8e-80, Method: Composition-based stats. Identities = 88/389 (22%), Positives = 154/389 (39%), Gaps = 60/389 (15%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN +Q AV E +L+LAGAGSGKT+ +V+R +L+ L L F KAA+ Sbjct: 7 KLNNSQTDAVKQTEGPVLILAGAGSGKTTTIVSRLAYLIEGIGIPASNTLTLTFTNKAAK 66 Query: 256 EMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM ER + TFH L ++ + + + + I + Sbjct: 67 EMRERASNMMSNLAYPPLLCTFHKFGLLFLKFNIHLLGRQNNFVVIDSDDKKRIIKKINS 126 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 + + +AS + R+ + Sbjct: 127 ELAT--------------------------------PLIASEISRYKN-----------S 143 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISP--- 430 + + + + + +A + + ++ L N VDF LI +L++ ++ Sbjct: 144 LLTPDDAYKQAEFFNYQQIAKIYEEYENYLLENNLVDFDDLIALTFKLLDENPELARTTS 203 Query: 431 --WKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 +++I+VDE+QD + + LL L ++ + VGDD Q+IY + GA + F + Sbjct: 204 DKYRYIMVDEYQDTNELQLKLLQKLCSTHN--NICVVGDDDQSIYGWRGAHIRNIMEFDQ 261 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDA 548 +F L+ YR I +VAN I+ N +L K L G + +T+L+ S + Sbjct: 262 DFIGTSVFKLEENYRSREPILKVANALIEHNRSRLGKKLIPTRGGGED-ITILNSSDENE 320 Query: 549 L-------LDKLSGYAKPEERILILARYH 570 ++KL E I +L R + Sbjct: 321 EARKIATKVNKLLDSGVKAEDIAVLYRVN 349 Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 15/89 (16%) Query: 571 HMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEAL 630 + +L+ + I M+IHASKG + D++ I+GL+EG Sbjct: 523 FLNELTLQSEQDQVEGDSIYMMSIHASKGLEFDHIFIIGLEEGFLPL------------- 569 Query: 631 LPPVEDFPDAEERRLMYVALTRARHRVWA 659 + EERRL YV+ TRA+ + Sbjct: 570 --VGDGSDLEEERRLGYVSFTRAKDTLTL 596 >UniRef50_C7M335 UvrD/REP helicase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M335_ACIFD Length = 715 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 106/398 (26%), Positives = 157/398 (39%), Gaps = 55/398 (13%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNP+Q AV +LVLAGAGSGKT VL R WLLA GE P IL + F KAA Sbjct: 8 DLNPSQREAVSAPIGPVLVLAGAGSGKTRVLTRRVAWLLAAGE-RPSSILAITFTNKAAG 66 Query: 256 EMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM ER+R + + + TFHA +++ + + S + Sbjct: 67 EMAERVRSLVGPNADGLWVSTFHAACARMLRLHPELGGLRSGWSIYDQDDARRLL----- 121 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 E+ RRL R+ + A+ Sbjct: 122 --------------------------------ERTIRRLDLDTKRFPPRAIAQQVSLAKA 149 Query: 374 IASAPEEIRDLFSKRI-KLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRF 427 PE D + +A + ++++ AL NA DF LI + L + Sbjct: 150 RLVDPERFTDEAEGLYERQVAMVYRSYQAALAEANAADFDDLIGLVVEGLATRPELAEHW 209 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 ++H+L+DE+QD +P + A +A L ++ ++FAVGD Q+IY F GA S F Sbjct: 210 RRRFRHVLIDEYQDANPAQHAFVAELVGRSG--SVFAVGDVDQSIYAFRGADPSGVLTFE 267 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL-----LD 542 E F + L+ YR + I +AN I +N + K L S A D Sbjct: 268 ERFDGAKVVTLEQNYRSTNAILGLANAVIAKNRRRYAKHLFSELGEGTPARRYQATDERD 327 Query: 543 ESQLDALLDK--LSGYAKPEERILILARYHHMRPASLE 578 E++ A + L I ++ R + E Sbjct: 328 EARWVAATVREFLQRGGVDPSEIAVIFRTNAQSRPLEE 365 Score = 68.9 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 41/106 (38%), Gaps = 22/106 (20%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + +T HA+KG + D +V + FP + V+ EERRL YV Sbjct: 545 VTLLTAHAAKGLEFDV--VVVVGLEEGVFPH----------VRAIVDAEAVEEERRLFYV 592 Query: 649 ALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVARKP 684 A+TRAR + + PS F++ L V P Sbjct: 593 AMTRARTTLVLTSARRRASWGEPLYNPPSRFLDELPADLVATTAAP 638 >UniRef50_B7IZB5 Helicase, UvrD/Rep family n=5 Tax=Bacillus cereus group RepID=B7IZB5_BACC2 Length = 666 Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats. Identities = 98/415 (23%), Positives = 169/415 (40%), Gaps = 65/415 (15%) Query: 188 FFRQVESS--PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQIL 245 FFR +E LN +Q AV N ++ LAGAGSGKTSVL ++ G+++ E P I+ Sbjct: 50 FFRSLEKHGIKLNESQIEAVRNVSGPVITLAGAGSGKTSVLTSKVGYMMNYKEIKPANIM 109 Query: 246 LLAFGRKAAEEMDERIRER-----LHTEDITARTFHALALHIIQQGSKKVPIVSKLENDT 300 +L F +KAAEEM RI + A TFH++ L +I+ Sbjct: 110 ILTFTKKAAEEMKSRISNLPGLSISGARQLLAGTFHSIFLRVIRNAG------------- 156 Query: 301 AARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWV 360 ++K ++ + + + + + ++ E + S + + Sbjct: 157 --------------INQKIISSEKMKHIAIKNILRDLKLADSYEPET----IVSMIGYFK 198 Query: 361 SLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIV 420 + M + + + + + ++ + +N +DF ++ Sbjct: 199 NHMIKPSDLPTKSVID-------------RELRDIYAMYEQWKEQQNMIDFDDILVIMYD 245 Query: 421 ILE-----KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRF 475 +L + K+ILVDEFQD S + A+L + L VGDDWQ+IY F Sbjct: 246 LLTTNFKLRELIQEKIKYILVDEFQDSSSIQYAILQIIAA--PHNNLTIVGDDWQSIYAF 303 Query: 476 SGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDK 535 GA + F ++ + ++ LDT YR N I + N I+QN Q K LN+ + Sbjct: 304 RGANPGIILNFPNDYSKVKKVILDTNYRSNPYIVGLGNSIIKQNKKQFDKTLNTNKDSGS 363 Query: 536 KAVTLLDESQLDA-------LLDKLSGYAKPEERILILARYHHMRPASLEKAATR 583 K + ++ ++ G K IL R H + + +E+ + Sbjct: 364 KPKYFSPDDSKQEATMIINDIIGQIKGGNKNYRDFSILYRTHAVSRSLIEQLVIK 418 Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 2/71 (2%) Query: 571 HMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPA--AARESIMEE 628 + +++ I MTIH SKG + +V I+G EG+ + + + + Sbjct: 584 ETQYEKMKELQKEQNVNAISLMTIHGSKGLEFKHVYIIGASEGTLPHKSSLEITDDRVID 643 Query: 629 ALLPPVEDFPD 639 + F + Sbjct: 644 GSKEKKKYFKN 654 >UniRef50_C6HZQ0 UvrD/REP helicase n=3 Tax=Leptospirillum RepID=C6HZQ0_9BACT Length = 647 Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats. Identities = 107/422 (25%), Positives = 168/422 (39%), Gaps = 53/422 (12%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 S LN QA AV+ + LVLAGAGSGKT VL RA LL+RG +P +ILLL F +KA+ Sbjct: 7 SDLNEEQAPAVLAPDGPALVLAGAGSGKTRVLTYRAAHLLSRGVPAP-RILLLTFTKKAS 65 Query: 255 EEMDERIRERLHTED--ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 M ER+ + A TFH + +I++ ++ + + E R Sbjct: 66 RVMQERLTGLMGPTFFIPWAGTFHHVGYRLIREFGHRIGVEGGRTLLDREDQRDLVKEIR 125 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 + + S+ + RR A L Sbjct: 126 DAVVGE-DPGEELPPAAAIAGYLSLSANLLLPLPAVIRRRAPWL---------------- 168 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----F 427 K + + + ++ A+ +DF L+ + +LE+ Sbjct: 169 -------------GHLEKTIEAIARRYREEKAAQRVLDFDDLLVLWLRLLEESPETAELL 215 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 ++H+LVDE+QD +P + +L L S LF VGDD Q+IY F GA + +F Sbjct: 216 RDRFRHVLVDEYQDTNPLQGKILDLLVA--SHKNLFVVGDDSQSIYSFRGAAIDNILSFQ 273 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS-LTNGDKKAVTLL--DES 544 E + E L+ YR I VANR I+QN Q+ K L S L D + + D+ Sbjct: 274 ERYPEAGVYRLEKNYRSTPNILSVANRIIEQNSRQIPKTLYSPLPEADHPTLVRMYSDQD 333 Query: 545 QLDALLDKLSG---YAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQ 601 Q + ++ + I +L R H++ + + + H + G + Sbjct: 334 QARYITTRIRRALDRGQEPSEIAVLYRAHYVSLSLQLSLSRAG-------IPFHLTSGLK 386 Query: 602 AD 603 Sbjct: 387 FF 388 Score = 75.5 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 66/190 (34%), Gaps = 32/190 (16%) Query: 506 SRIGEVANRFIQQNPGQLKKPLN----------SLTNGDKKAVTLLDESQLDALLDKLSG 555 I +A RF Q + +K + D T D + + + Sbjct: 459 PGIAGIAERF-SQLAERREKNPRDVMDLVGTILATGYHDYLYETFEDPESREEDILSFAA 517 Query: 556 YAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSD 615 PE + + A E+ + K ++ T+H +KG + D V ++ L EG Sbjct: 518 QIPPETDLADFMAELALLEAGGEELSQEEQKNRVVLSTVHQAKGLEWDTVYLLSLAEGV- 576 Query: 616 GFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNK---------ENP 666 FP++ EE RRL YVA+TRARH + + P Sbjct: 577 -FPSSRSAETDEEIEEE----------RRLFYVAVTRARHDLVLCVPQVVGRGFGSPAPP 625 Query: 667 SPFVEILKNL 676 S F+ + Sbjct: 626 SRFLGEIGED 635 >UniRef50_Q481U8 Helicase IV n=1 Tax=Colwellia psychrerythraea 34H RepID=Q481U8_COLP3 Length = 1042 Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 131/311 (42%), Positives = 191/311 (61%), Gaps = 20/311 (6%) Query: 386 SKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQ 445 K + L+ P+L A++ L + +DF +I++A+ ++ G+F SPW++I+VDEFQDIS Sbjct: 598 EKALALLKPILSAYEQHLAQHHEIDFEDMINKALTYVQAGQFKSPWRYIMVDEFQDISEP 657 Query: 446 RAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFN 505 RA L+ ALR N + ++FAVGDDWQAIYRFSGA ++LTT F FG + +LD T+RFN Sbjct: 658 RARLVKALRDNNKECSVFAVGDDWQAIYRFSGADVTLTTQFSNYFGSTTQSELDQTFRFN 717 Query: 506 SRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQ------------------LD 547 ++IG+VA FI +NP Q+ K + SL + AV+LL +D Sbjct: 718 NQIGKVATDFISKNPAQITKKITSLKQVNAPAVSLLKRDNSQFRSRKTGLIDEMANGAID 777 Query: 548 ALLDKLSGYAKPEERILILARYHHMRPAS--LEKAATRWPKLQIDFMTIHASKGQQADYV 605 +L +S + +LAR+ P++ L + ++P L ID + H SKG++ADYV Sbjct: 778 DVLAAISAKVCKPVTVYLLARFWFFLPSNIDLNRLNNQYPLLTIDAQSFHTSKGKEADYV 837 Query: 606 IIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN 665 IIVGL++G+ GFP+ + EALL E FP AEERRL+YVALTRA+ RV+ + + Sbjct: 838 IIVGLKKGAHGFPSEKVTPALNEALLAKKEKFPYAEERRLLYVALTRAKDRVYIIADMTE 897 Query: 666 PSPFVEILKNL 676 +PFV+ L N Sbjct: 898 SNPFVKELVND 908 Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 103/446 (23%), Positives = 180/446 (40%), Gaps = 31/446 (6%) Query: 5 ATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLAIHCKRGLVWGELEFVLPDE 64 ++ +R P I + G+ + + I + +L+ +G++ + Sbjct: 31 PSSFFRRFIGIP-TAIKISDCGVVIDVEDSLTTIKWEELIVPPTFHLSFFGQIISFKTES 89 Query: 65 KVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENKWLTREQ 124 K + ++ H + +RW+ +L R + R Q Sbjct: 90 KSYVFTMLAYKSKRK---HKNNCEQRWAAANIHRVETLLTAIERFKTNRYMRRSIIERIQ 146 Query: 125 TSGVQQQIR----QALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEA 180 + Q+ +R ++ + L + Q W + + ++Y Sbjct: 147 LASRQELVRWLPWLNSNSSSKSTSSLTNVIEITQRLSYYQHWQQQGIA---DCRESYISK 203 Query: 181 MLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEAS 240 L + FF VES+PL Q RA + + L+LAGAG+GKTSV++ R G+LL +A Sbjct: 204 QLQTHEAFFDNVESNPLTLCQRRACIIDNDNNLLLAGAGTGKTSVMIGRTGYLLNSLQAK 263 Query: 241 PEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDT 300 ++ILLLA+GRKAA EMDERIR++L T+ I+A TFH L L II Q P +S L +D Sbjct: 264 SDEILLLAYGRKAANEMDERIRDKLSTDKISATTFHRLGLSIIAQVEGGKPSLSVLADDE 323 Query: 301 AARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWV 360 A+ + + + + E + K ++ + +F + + L Sbjct: 324 KAKSKWIQSYFERLIKEDRQYRKLILEYFGKYYYVERSAFDFKSKGEYYQYLTD------ 377 Query: 361 SLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAW--KGALKAENAVDFSGLIHQA 418 + +R G Q + LFS I+ A+ K + + DF Sbjct: 378 NDIRSFKGEQVKSFGELY-IANSLFSYGIEYQYEAKYAYDVKSIERKQYQPDF------- 429 Query: 419 IVILEKGRFISPWKHILVDEFQDISP 444 + E +I + +DE +D +P Sbjct: 430 -FLPEFNVYIEYYG---IDENEDTAP 451 >UniRef50_A9NHW3 DNA helicase II n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NHW3_ACHLI Length = 703 Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 88/399 (22%), Positives = 142/399 (35%), Gaps = 68/399 (17%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNP Q +A + L V+AGAG+GKT L R +L+ +P+ IL + F KAA Sbjct: 9 QLNPQQKKAATHISGPLFVVAGAGTGKTRTLTTRIAYLIEELGVAPDSILAVTFTNKAAR 68 Query: 256 EMDERIRERLHT--EDITARTFHALALHIIQQGSKKV--PIVSKLENDTAARHELFIAEW 311 EM ERI E + TFHA + ++++ + + + + + Sbjct: 69 EMKERIVEMAGPYATNTWIYTFHAFGVKVLRRDIEHLKMGYTVNFNIIDEDDAKAMVRKI 128 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 K + K A+ + +SL + Sbjct: 129 IKDLNLDTKSYK-----------------------------ANAIRHKISLFKHLNI--- 156 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR----- 426 D F + + +L+ + L N +DF L + ++ + Sbjct: 157 -----------DYFDNANERL--VLEKYTHELITNNLLDFDDLQILTYKLFDEHQHILEY 203 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + + + ILVDEFQD + ++ L Q LF VGD Q+IY F GA F Sbjct: 204 YQNKFNFILVDEFQDTDHLQYKMMKLLA--GKQKNLFVVGDPDQSIYAFRGANYDNAKFF 261 Query: 487 HENFGEGE----RCDLDTTYRFNSRIGEVANRFIQQNPGQ-LKKPLNSLTNGDKKAVTLL 541 +F + LD YR I + AN+ I N + K L + K Sbjct: 262 LNDFKNEDGSKAEIVLDLNYRSTKEILKFANKLITSNKNRPFSKSLETDLGNGLKPFIWS 321 Query: 542 DESQL-------DALLDKLSGYAKPEERILILARYHHMR 573 +S L + + + I IL R + + Sbjct: 322 AQSDLNEAQMIANEIETLIKDGGYKYSDIAILYRNNALS 360 Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 43/112 (38%), Gaps = 22/112 (19%) Query: 572 MRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALL 631 + A + T H KG + V + ++E FP++ Sbjct: 533 DQIALYSDLDRNKVSDAVVLSTFHQVKGLEFKVVFMTVMEEQI--FPSS----------Q 580 Query: 632 PPVEDFPDAEERRLMYVALTRARHRVWALFNKE----------NPSPFVEIL 673 ++ EERR+ YV +TRA+ R++ +++ PS F++ + Sbjct: 581 SFMDLNELEEERRIAYVGVTRAKERLYLTRSEKRLLYGALIYPRPSRFLKEM 632 >UniRef50_C3LBP3 ATP-dependent DNA helicase, UvrD/REP family n=82 Tax=Bacillus RepID=C3LBP3_BACAC Length = 688 Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 110/441 (24%), Positives = 179/441 (40%), Gaps = 67/441 (15%) Query: 164 KDIESARLQHNQAYTEAMLTEYAD--FFRQVESSP--LNPAQARAVVNGEHSLLVLAGAG 219 DI A + T ++ E AD +FR +E LN Q AV E +L LAGAG Sbjct: 14 ADIPRATYHIPKTSTHLIMEEDADAAYFRALEQQNVFLNEKQLEAVRTTEGPVLTLAGAG 73 Query: 220 SGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLH-----TEDITART 274 SGKTSVL R G+L+ + P ILLL F +KAAEE+ R+ + + A T Sbjct: 74 SGKTSVLTTRVGYLVNVKQVHPRNILLLTFTQKAAEEIRNRVANLPGMNHAASSYVVAGT 133 Query: 275 FHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQ 334 FH++ L +++ ++ E KQ KK + Sbjct: 134 FHSVFLKLLRSQGYN--------------QQILANEKHKQIMIKKILKE----------- 168 Query: 335 WSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAP 394 + + +D E + +SL + ++ A P E + Sbjct: 169 --LRLKDAYDAETMLAM--------ISLEKNKLNRPKDVKAKTPVE---------QEFKE 209 Query: 395 LLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RFISPWKHILVDEFQDISPQRAAL 449 + + ++ + N +DF ++ + +LE + + +I VDEFQD S + + Sbjct: 210 VYERFEEVKQRYNYIDFDDILLETYYMLENNAPLLTQLQQRFHYIEVDEFQDTSYAQYEI 269 Query: 450 LAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIG 509 + L + LF GDD QAIY + GA + +F + F L+T YR N I Sbjct: 270 VKLLAS--PRNNLFIAGDDDQAIYGWRGASHQIILSFPKEFDNTTIIALNTNYRSNPFIV 327 Query: 510 EVANRFIQQNPGQLKKPLNSLTNGD-----KKAVTLLDESQ--LDALLDKLSGYAKPEER 562 + N I+ N + K L S+ + T LDE+ L + +K+ + + Sbjct: 328 GLGNEVIKLNQERFDKELYSVREEGVQPFYARPATTLDEANQILQLIQEKVDSGERNYKD 387 Query: 563 ILILARYHHMRPASLEKAATR 583 +L R H + + L++ Sbjct: 388 FCLLYRTHSVSRSLLDQLTIH 408 Score = 82.0 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 4/89 (4%) Query: 575 ASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPV 634 +E T K + M+IH +KG + V ++G +G ++ +++ Sbjct: 577 KEMEALKTMPQKDAVSLMSIHNAKGLEFPCVFLLGASDGILPHTSSLKDANDRVTETSEA 636 Query: 635 EDFPDAEERRLMYVALTRARHRVWALFNK 663 EERRL+YVA+TRA+ ++ + Sbjct: 637 ----LEEERRLLYVAITRAKEELYISSPQ 661 >UniRef50_A4WTK0 UvrD/REP helicase n=8 Tax=Rhodobacterales RepID=A4WTK0_RHOS5 Length = 978 Score = 298 bits (763), Expect = 4e-79, Method: Composition-based stats. Identities = 125/403 (31%), Positives = 199/403 (49%), Gaps = 25/403 (6%) Query: 304 HELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLM 363 + I + + E + +P +D +++ + + Sbjct: 462 ETILIETYSYERQEGCLLTGLAEKLAPYVPLKPLPADTIYDRITELKQVDDFSKLLGTFL 521 Query: 364 RMHGGAQAEMIASAPEEIRDLFSKRIK----LMAPLLKAWKGALKAENAVDFSGLIHQAI 419 R + ++ + + +R K + AP+ ++ L +DF +I +A Sbjct: 522 RKYKSGGYSIVDCETKSEKMKLGRRAKAFLAVFAPVFAEYQRRL--GGRIDFEDMILRAA 579 Query: 420 VILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQ 479 +E GR+ SP++HILVDEFQDIS RA L+ AL+ Q+ + +FAVGDDWQ+I+RF+G+ Sbjct: 580 DYVETGRYTSPFRHILVDEFQDISQSRARLVKALKAQHPEVRIFAVGDDWQSIFRFAGSD 639 Query: 480 MSLTTAFHENFGE--------GERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLT 531 + L F FG DL T+R +I A F+ +NP Q++K + Sbjct: 640 IHLMRHFGREFGGDFDGETGVHRTVDLGRTFRSVDQIAFAARTFVLRNPAQIQKQIVPAG 699 Query: 532 NGDKKAVTLL------DESQLDALLDKLSGYAKPEER---ILILARYHHMRPASLEKAAT 582 + A+ ++ DE +L A+L LS PE + +L+L RY + P + Sbjct: 700 IAAEPAIKVVTVSKGEDEKKLSAVLAALSAALAPEAKPATVLLLGRYRFLEP-DMRDLGR 758 Query: 583 RWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEE 642 R+P+L I F TIHASKG +AD+VI++ G GFP+ + + + P E FP+AEE Sbjct: 759 RYPRLNISFKTIHASKGLEADHVILLNADSGRTGFPSEIVDDPLLSLVSPEEEAFPNAEE 818 Query: 643 RRLMYVALTRARHRVWALFNKENPSPFVEILK-NLDVPVARKP 684 RR+MYVA+TRARH + L + PS FV L+ + D +A P Sbjct: 819 RRVMYVAMTRARHTLTILASNARPSSFVVELRSDPDYGIAAAP 861 Score = 164 bits (416), Expect = 9e-39, Method: Composition-based stats. Identities = 79/314 (25%), Positives = 128/314 (40%), Gaps = 2/314 (0%) Query: 19 RAVILNAGIKVSGDRHEYLIPFNQLLAI-HCKRGLVWGELEFVLPDEKVVRLHGTEWGET 77 + + ++ + + I + A ++G + +L + V L + Sbjct: 23 VLELDDNVLRSTRRGRKKEISLEAVTAAPMLRKGALGTKLTIPVSGSGGVTLRAARHNDA 82 Query: 78 QRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENKWLTREQTSGVQQQIRQALS 137 + F + W ++ + + S + IA +++ V R + Sbjct: 83 RTFAEQVRQAWVAFNLDALDRESERFDRICRGIADLAAPSRYPAACCLVPVLTDARALDA 142 Query: 138 ALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEAMLTEYADFFRQVESSPL 197 AL + + ++ + +AR + + L + DFF +ES PL Sbjct: 143 ALLAKLQPEAIGPEAAARIAAVRRFIAEPRAARADAIATFVTSELERWRDFFDTIESKPL 202 Query: 198 NPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEM 257 P Q +VV E + LVLAGAGSGKTSV+ A+A +L+ G PE+ILLLAF + AAEEM Sbjct: 203 TPEQRLSVVVDEDATLVLAGAGSGKTSVITAKAAYLVKAGIRKPEEILLLAFAKNAAEEM 262 Query: 258 DERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSE 317 ER+ R I+ARTFHA+A II P ++ D A L + Sbjct: 263 SERVEARSGVP-ISARTFHAIAYDIIGIVEGSKPALADHATDDLAFRNLIKQILKDLVHA 321 Query: 318 KKAQAKGWRQWLTE 331 + QW Sbjct: 322 LSEVSTAIIQWFAH 335 >UniRef50_C8P127 ATP-dependent DNA helicase PcrA n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P127_ERYRH Length = 715 Score = 298 bits (762), Expect = 6e-79, Method: Composition-based stats. Identities = 92/401 (22%), Positives = 156/401 (38%), Gaps = 49/401 (12%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 LN Q AV+ + V+AGAGSGKT VL R L+A P +I + F KAA Sbjct: 5 QGLNKEQKEAVLTKAKHVRVIAGAGSGKTRVLTTRIVHLIADLGYYPSKICAITFTNKAA 64 Query: 255 EEMDERIRERLHTE-DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM ER+ L + T H+L + II++ + + +V + + + E K Sbjct: 65 NEMKERMEAMLPDAIRVHTSTIHSLCVRIIREEYEALNLVRNFTILDTSDQQAVMREAYK 124 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 Q + +R+ LT ++S + G A+ Sbjct: 125 QFDYDRKDI-SFREALT----------------------------YISNNKFAGVDVAQA 155 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RFI 428 A + + L + + L A+DF L+ + + ++ ++ Sbjct: 156 ERMAGSNYHE------QKKVNLYRFYVNRLHELFALDFDDLLLEVNRLFKENLEVRDKWR 209 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 + +LVDEFQD+ + ++ AL +Q L+ VGD Q IY + GA + F + Sbjct: 210 RRFDVVLVDEFQDVDHVQYGIVDALVGDENQ--LYVVGDPDQTIYTWRGANVDFIIDFDK 267 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKA-VTLLDESQLD 547 + E E L+ YR I + AN I+ N + K L + + LD+ + Sbjct: 268 KYPESETITLNQNYRSTQHILDSANTLIKNNKDRPDKALYANKESEFPVQYATLDDGDAE 327 Query: 548 ALLD-----KLSGYAKPEERILILARYHHMRPASLEKAATR 583 A +L + +L R +++ A + R Sbjct: 328 AYWVANRMLELHDEGHSYLDMAVLYRSNYLSRALEKVLMAR 368 Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 20/95 (21%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + MT+HA+KG + + V I+GL + + +E EERRLMYV Sbjct: 540 VRLMTVHAAKGLEFENVFIMGLADNIFPNKNSIQEG-----------SGGIQEERRLMYV 588 Query: 649 ALTRARHRVWALFN---------KENPSPFVEILK 674 A+TRA+ R++ N S F++ + Sbjct: 589 AITRAKERLFLSNNIGYNFVAGGYARASRFIKEMH 623 >UniRef50_C2ME74 ATP-dependent DNA helicase PcrA n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2ME74_9PORP Length = 778 Score = 297 bits (761), Expect = 9e-79, Method: Composition-based stats. Identities = 93/428 (21%), Positives = 166/428 (38%), Gaps = 51/428 (11%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 V+ + LN AQ AVV E LV+AGAGSGKT V+ + L+ +G +P+++ L F Sbjct: 2 VDLTALNEAQRVAVVYNEGPALVIAGAGSGKTRVITYKLAHLVDQGW-NPQRLYALTFTN 60 Query: 252 KAAEEMDERIRERLHTE---DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFI 308 KAA EM R+ E L + TFH++ I+++ + + + + I Sbjct: 61 KAAGEMRSRVSEMLGEGIAYRLRMGTFHSICGRILRRYAPLLGYSQDYSIYDTSDTKALI 120 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 K+ + ++ +R++ + +S Sbjct: 121 RNCIKELDL---------------------SDKSYTPTRVLKRISDAKNMLIS------- 152 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE----- 423 + A+ E + + + L + K N++DF L+ V++ Sbjct: 153 --PQAYAANQEIRKYDTMNQEGELYKLYSLYTQRCKESNSMDFDDLLFLLNVLIRDFPEA 210 Query: 424 KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 S +L+DE+QD + + L L +++ +FAVGDD Q+IY F GA+++ Sbjct: 211 HQEIKSGIDFLLIDEYQDTNTSQFELARHLVADHNR--IFAVGDDAQSIYSFRGARIANI 268 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDE 543 +F + F + L+ YR I AN I+ N ++ K + + +K Sbjct: 269 LSFKQAFAGAKLFKLEQNYRSTGHIVSSANALIEHNQQRIPKEVYTDLGEGEKLQLYHYT 328 Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQAD 603 S + + + + P S + R F + S+G Sbjct: 329 SSDEEATRLIDIITQRHDE--------EQIPLSDQTILYRTNAQSRKFEEVLLSEGI--P 378 Query: 604 YVIIVGLQ 611 YVI G+ Sbjct: 379 YVIYGGMA 386 Score = 75.1 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 22/98 (22%) Query: 586 KLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRL 645 + ++ MTIH +KG + YV I G++E P++ E EERRL Sbjct: 579 QDRLQLMTIHVAKGLEFPYVYIAGVEENL--LPSSRSLDTAE----------MIEEERRL 626 Query: 646 MYVALTRARHRVWALFNKEN----------PSPFVEIL 673 +YV +TRA+ + PS F+ L Sbjct: 627 LYVGITRAQKLCTLSYTSIRTRNGKTELMIPSRFIAEL 664 >UniRef50_D0JAI1 ATP-dependent DNA helicase n=2 Tax=Blattabacterium RepID=D0JAI1_BLASB Length = 709 Score = 297 bits (760), Expect = 9e-79, Method: Composition-based stats. Identities = 81/390 (20%), Positives = 153/390 (39%), Gaps = 59/390 (15%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN +Q + + +LVLAGAGSGKT V+ R ++ +P IL L F +KAA+ Sbjct: 2 SLNSSQRKIIETINGPILVLAGAGSGKTRVITYRIVHMIQNIGINPSNILALTFTKKAAK 61 Query: 256 EMDERIRERLHT---EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM RI + IT TFH++ ++++ S + S E I + Sbjct: 62 EMKHRISNMIDQKKLNQITLGTFHSIFSILLRKESHLLGYKSNYTIYDQRDSENVIKKIL 121 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 + + D + + + + + + ++ Sbjct: 122 EDIN--------------------------LDISLSTKEIRRIISEYKNNLYINKKN--- 152 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRF 427 +K+ + + + K++ A+DF ++ + ++ Sbjct: 153 -------------NKQSECLIKIYKSYIKRCLQAEALDFDDILLHTNHLFSHFPNVLRKY 199 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + +K+IL+DE+QD + + ++ +L Q+ LF VGDD Q+IY F GA++S FH Sbjct: 200 QNKFKYILIDEYQDTNLSQNTIIKSLAFQHK--NLFVVGDDAQSIYAFRGAKISNILNFH 257 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQ-- 545 ++ + L+ YR I + +N I N Q+ K + + +K S+ Sbjct: 258 IDYKNAKVFRLEQNYRSTHHIVQASNNIISFNKNQILKKIWTNNEKGEKVKIYSASSEKE 317 Query: 546 -----LDALLDKLSGYAKPEERILILARYH 570 ++ + + IL R + Sbjct: 318 EALYVASSIFSIIKKTKYHYKDFAILYRAN 347 Score = 86.3 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 56/154 (36%), Gaps = 23/154 (14%) Query: 531 TNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQID 590 N + + + + ++ E + +Y + + ++ Sbjct: 483 KNYKNENFQYILNNIFCYVSEQKKLKDNGEISLSGFLQY-FYLEIDEDMNHDENEENKVS 541 Query: 591 FMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVAL 650 MT+H SKG + V I+GL+E FP+ + F EERRL YVAL Sbjct: 542 LMTVHLSKGLEFSIVFIIGLEENL--FPSKSSLD----------NQFKIEEERRLFYVAL 589 Query: 651 TRARHRVWALFNKEN----------PSPFVEILK 674 TRA+ + + + PS F+ L Sbjct: 590 TRAQKKAVLTYARSRFLWGERKMTLPSRFINELN 623 >UniRef50_A8Q3F1 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8Q3F1_MALGO Length = 876 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 88/408 (21%), Positives = 155/408 (37%), Gaps = 46/408 (11%) Query: 195 SPLNPAQARAVVNG-EHSLLVLAGAGSGKTSVLVARAGWLLA----RGEASPEQILLLAF 249 S L+ AQ AV + L +LAG GSGKT VL R WL+ R P Q +++ F Sbjct: 4 SGLSDAQRTAVTSDASRPLQILAGPGSGKTRVLTTRVAWLVQGAPDRKPIPPSQCVVVTF 63 Query: 250 GRKAAEEMDERIRERLHTED---ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHEL 306 KAA EM R++ + E + TFHA +++ +++ + + A + Sbjct: 64 TNKAAAEMRSRLQALIGEERTRMLILGTFHATCARFLRRWGERIGLSRQFTIADADDAKR 123 Query: 307 FIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMH 366 I + A + E ++ R ++ ++ Sbjct: 124 IIKDICADFDADMAS-----------------DDVRVKPETAIAAISRAKSRCMNAVQWR 166 Query: 367 GGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR 426 ++ + EE + + ++ L + NA+DF L+ + + + Sbjct: 167 SMSKYPPGTAMHEEHT--------YVCRIYAEYESRLASHNALDFDDLLMYGVKLFREHP 218 Query: 427 FIS--PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 F+S +H+LVDEFQD + + L+ + N ++ VGD Q+IY + A +S Sbjct: 219 FLSLDHIEHVLVDEFQDTNAVQYELMCHMSAGNKCVSI--VGDPDQSIYSWRHADVSHLE 276 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAV----TL 540 +F +R L+ +R I + A +QQ+ +++K L + V Sbjct: 277 RMRTDFPGVQRVLLEQNFRSTPSILDAALSVMQQDKLRIQKGLYTSHAQGAPVVLRAFHD 336 Query: 541 LDESQLDALLDKLS-----GYAKPEERILILARYHHMRPASLEKAATR 583 DE L+ L G I IL R++ Sbjct: 337 ADEEARYIALEILRHVQCTGGLLTFADISILLRFNAQSRPLEAALQRH 384 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 41/114 (35%), Gaps = 27/114 (23%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 P + T HA+KG + V + ++G F + E Sbjct: 606 PPAMVTISTCHAAKGLEWPVVFLPASEDGIYPF--YRSTTPEERREERR----------- 652 Query: 645 LMYVALTRARHRVWALFNK----------ENPSPFVEILKNLD----VPVARKP 684 L YVA+TRA+ + ++ SPF+ L + VP+ +KP Sbjct: 653 LYYVAMTRAQTNLILSWSHRRLVMSEWSSRQLSPFLAPLVSKAHGGHVPLDKKP 706 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P15038 Helicase IV n=169 Tax=cellular organisms RepID=H... 686 0.0 UniRef50_A9ZEX9 Helicase IV (75 kDa helicase) n=15 Tax=Enterobac... 623 e-176 UniRef50_D0YXK5 DNA helicase IV n=1 Tax=Photobacterium damselae ... 597 e-169 UniRef50_Q6LST7 Hypothetical helicase IV n=5 Tax=Gammaproteobact... 597 e-169 UniRef50_A5EZU3 Helicase IV n=56 Tax=Vibrionales RepID=A5EZU3_VIBC3 568 e-160 UniRef50_D0IB53 DNA helicase IV n=1 Tax=Grimontia hollisae CIP 1... 546 e-153 UniRef50_Q5E4C9 DNA helicase IV n=3 Tax=Aliivibrio RepID=Q5E4C9_... 538 e-151 UniRef50_C4LER9 UvrD/REP helicase n=1 Tax=Tolumonas auensis DSM ... 519 e-145 UniRef50_A4CC59 DNA helicase IV n=1 Tax=Pseudoalteromonas tunica... 484 e-135 UniRef50_Q3IIK2 Putative helicase IV n=1 Tax=Pseudoalteromonas h... 448 e-124 UniRef50_A6FAM2 Hypothetical helicase IV n=1 Tax=Moritella sp. P... 447 e-124 UniRef50_B8I5U1 ATP-dependent DNA helicase PcrA n=14 Tax=Firmicu... 446 e-123 UniRef50_D2R9Y0 Putative ATP-dependent DNA helicase PcrA n=1 Tax... 444 e-123 UniRef50_A8MLJ7 ATP-dependent DNA helicase PcrA n=3 Tax=Firmicut... 440 e-122 UniRef50_A9KP66 UvrD/REP helicase n=12 Tax=Bacteria RepID=A9KP66... 436 e-120 UniRef50_C7N6W8 DNA/RNA helicase, superfamily I n=1 Tax=Slackia ... 434 e-120 UniRef50_C9XK50 ATP-dependent DNA helicase n=5 Tax=Clostridium R... 430 e-119 UniRef50_C4Z8S4 ATP-dependent DNA helicase PcrA n=17 Tax=Firmicu... 430 e-118 UniRef50_C2KR35 ATP-dependent DNA helicase n=3 Tax=Mobiluncus Re... 430 e-118 UniRef50_C6D4S8 ATP-dependent DNA helicase PcrA n=46 Tax=Firmicu... 429 e-118 UniRef50_C4G2S8 Putative uncharacterized protein n=1 Tax=Abiotro... 428 e-118 UniRef50_A8SUE8 Putative uncharacterized protein n=4 Tax=Clostri... 427 e-118 UniRef50_A0Q2Q4 ATP-dependent DNA helicase PcrA, putative n=23 T... 426 e-117 UniRef50_Q8CRT9 ATP-dependent DNA helicase pcrA n=245 Tax=cellul... 425 e-117 UniRef50_C7MP63 DNA/RNA helicase, superfamily I n=6 Tax=Coriobac... 425 e-117 UniRef50_C7MAK0 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria... 424 e-117 UniRef50_D1A297 ATP-dependent DNA helicase PcrA n=3 Tax=Actinomy... 424 e-117 UniRef50_Q6GFF2 ATP-dependent DNA helicase pcrA n=81 Tax=cellula... 422 e-116 UniRef50_C5C915 ATP-dependent DNA helicase PcrA n=7 Tax=Actinomy... 422 e-116 UniRef50_B1I553 ATP-dependent DNA helicase PcrA n=6 Tax=Bacteria... 422 e-116 UniRef50_UPI0001C3187F UvrD/REP helicase n=1 Tax=Conexibacter wo... 422 e-116 UniRef50_C2L0R7 ATP-dependent DNA helicase PcrA n=1 Tax=Oribacte... 421 e-116 UniRef50_D2NR24 Superfamily I DNA and RNA helicase n=17 Tax=Bact... 421 e-116 UniRef50_C6A858 Superfamily I DNA and RNA helicase n=18 Tax=Bifi... 420 e-116 UniRef50_C2CV85 Possible ATP-dependent DNA helicase n=2 Tax=Bifi... 420 e-115 UniRef50_C8W206 ATP-dependent DNA helicase PcrA n=2 Tax=Clostrid... 419 e-115 UniRef50_B1C8W2 Putative uncharacterized protein n=1 Tax=Anaerof... 419 e-115 UniRef50_C8WTI7 ATP-dependent DNA helicase PcrA n=2 Tax=Alicyclo... 418 e-115 UniRef50_UPI00016C0C66 ATP-dependent DNA helicase PcrA n=1 Tax=E... 418 e-115 UniRef50_B8FP41 ATP-dependent DNA helicase PcrA n=10 Tax=Firmicu... 417 e-115 UniRef50_Q0TN58 ATP-dependent DNA helicase PcrA n=12 Tax=Clostri... 415 e-114 UniRef50_B2GM51 ATP-dependent DNA helicase UvrD1 n=10 Tax=Actino... 415 e-114 UniRef50_A7VTM6 Putative uncharacterized protein n=1 Tax=Clostri... 415 e-114 UniRef50_Q28NL8 ATP-dependent DNA helicase, Rep family n=11 Tax=... 413 e-113 UniRef50_A8HYL6 DNA helicase II n=8 Tax=Rhizobiales RepID=A8HYL6... 413 e-113 UniRef50_A5GA79 UvrD/REP helicase n=10 Tax=Desulfuromonadales Re... 412 e-113 UniRef50_D0BN23 ATP-dependent DNA helicase PcrA n=5 Tax=Firmicut... 412 e-113 UniRef50_D1VUE5 ATP-dependent DNA helicase PcrA n=1 Tax=Peptonip... 412 e-113 UniRef50_C8WV10 UvrD/REP helicase n=2 Tax=Alicyclobacillus acido... 412 e-113 UniRef50_Q2RGX9 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria... 411 e-113 UniRef50_Q3A0S9 ATP-dependent DNA helicase PcrA n=1 Tax=Pelobact... 411 e-113 UniRef50_A1AUN0 ATP-dependent DNA helicase PcrA n=10 Tax=Desulfu... 411 e-113 UniRef50_C0VSX9 ATP-dependent DNA helicase n=2 Tax=Corynebacteri... 410 e-112 UniRef50_A9WKU6 DNA helicase II n=2 Tax=Bacteria RepID=A9WKU6_RENSM 409 e-112 UniRef50_C1A3F5 ATP-dependent DNA helicase UvrD1 n=31 Tax=Bacter... 408 e-112 UniRef50_UPI00016B20E8 ATP-dependent DNA helicase PcrA n=1 Tax=c... 408 e-112 UniRef50_A5CU47 ATP-dependent DNA helicase n=4 Tax=Actinobacteri... 408 e-112 UniRef50_UPI000051001F putative ATP-dependent DNA helicase II n=... 407 e-112 UniRef50_A4XKK0 ATP-dependent DNA helicase PcrA n=2 Tax=Clostrid... 407 e-112 UniRef50_Q1PY53 Strongly similar to ATP-dependent DNA helicase n... 406 e-111 UniRef50_Q1IVP8 ATP-dependent DNA helicase, Rep family n=2 Tax=B... 406 e-111 UniRef50_C7HU69 ATP-dependent DNA helicase PcrA n=2 Tax=Anaeroco... 406 e-111 UniRef50_A4XBE9 ATP-dependent DNA helicase PcrA n=18 Tax=Actinom... 405 e-111 UniRef50_C8XDJ8 ATP-dependent DNA helicase PcrA n=2 Tax=Actinomy... 405 e-111 UniRef50_C4V2E0 ATP-dependent DNA helicase n=1 Tax=Selenomonas f... 405 e-111 UniRef50_A9H0P3 UvrD/REP helicase n=3 Tax=Alphaproteobacteria Re... 404 e-111 UniRef50_C7RHP9 UvrD/REP helicase n=3 Tax=Anaerococcus RepID=C7R... 404 e-111 UniRef50_C7QGW9 ATP-dependent DNA helicase PcrA n=8 Tax=Bacteria... 403 e-110 UniRef50_C9LR66 ATP-dependent DNA helicase PcrA n=1 Tax=Dialiste... 402 e-110 UniRef50_UPI00016C5306 ATP-dependent DNA helicase n=2 Tax=Gemmat... 402 e-110 UniRef50_B5K795 UvrD/REP helicase n=5 Tax=Rhodobacterales RepID=... 401 e-110 UniRef50_C1F7R1 ATP-dependent DNA helicase, UvrD/REP family n=1 ... 401 e-110 UniRef50_A5UP48 DNA helicase, UvrD/REP helicase family n=2 Tax=M... 400 e-110 UniRef50_C1SJ11 DNA/RNA helicase, superfamily I n=1 Tax=Denitrov... 400 e-110 UniRef50_C5NYN7 ATP-dependent helicase PcrA n=1 Tax=Gemella haem... 400 e-109 UniRef50_Q029V8 ATP-dependent DNA helicase, Rep family n=1 Tax=C... 400 e-109 UniRef50_B3EU74 UvrD/REP helicase n=4 Tax=Bacteroidetes RepID=B3... 400 e-109 UniRef50_B0RZV9 ATP-dependent DNA helicase n=2 Tax=Finegoldia ma... 400 e-109 UniRef50_Q9CD72 ATP-dependent DNA helicase pcrA n=26 Tax=Actinom... 399 e-109 UniRef50_D1CD72 UvrD/REP helicase n=1 Tax=Thermobaculum terrenum... 398 e-109 UniRef50_B5YHS6 ATP-dependent DNA helicase PcrA n=1 Tax=Thermode... 398 e-109 UniRef50_C1XMD9 ATP-dependent DNA helicase, Rep family n=1 Tax=M... 398 e-109 UniRef50_B9KXW3 ATP-dependent DNA helicase pcrA n=2 Tax=Thermomi... 397 e-109 UniRef50_C8S459 UvrD/REP helicase n=1 Tax=Rhodobacter sp. SW2 Re... 397 e-109 UniRef50_B1GYW6 ATP-dependent UvrD family DNA helicase PcrA n=1 ... 397 e-109 UniRef50_A8SMG4 Putative uncharacterized protein n=1 Tax=Parvimo... 397 e-109 UniRef50_Q2S550 ATP-dependent DNA helicase pcrA n=2 Tax=Rhodothe... 397 e-108 UniRef50_A7NGD4 UvrD/REP helicase n=11 Tax=Chloroflexi RepID=A7N... 396 e-108 UniRef50_Q11GU4 ATP-dependent DNA helicase, Rep family n=53 Tax=... 396 e-108 UniRef50_C9LD15 ATP-dependent DNA helicase PcrA n=1 Tax=Prevotel... 395 e-108 UniRef50_B4UKQ6 UvrD/REP helicase n=4 Tax=Anaeromyxobacter RepID... 395 e-108 UniRef50_C7M3I8 UvrD/REP helicase n=3 Tax=Bacteroidetes RepID=C7... 395 e-108 UniRef50_C8WBZ1 UvrD/REP helicase n=7 Tax=Alphaproteobacteria Re... 395 e-108 UniRef50_Q67KI7 ATP-dependent DNA helicase n=1 Tax=Symbiobacteri... 394 e-108 UniRef50_A1BEA2 ATP-dependent DNA helicase PcrA n=2 Tax=Chlorobi... 393 e-108 UniRef50_C3QGR5 ATP-dependent DNA helicase n=23 Tax=Bacteroidale... 393 e-107 UniRef50_Q1J014 UvrD/REP helicase n=4 Tax=Deinococci RepID=Q1J01... 392 e-107 UniRef50_C7NAU4 UvrD/REP helicase n=5 Tax=Fusobacteriaceae RepID... 392 e-107 UniRef50_B7AA42 UvrD/REP helicase n=1 Tax=Thermus aquaticus Y51M... 392 e-107 UniRef50_B3QYS3 UvrD/REP helicase n=9 Tax=Chlorobiaceae RepID=B3... 391 e-107 UniRef50_B9X9R1 UvrD/REP helicase n=1 Tax=bacterium Ellin514 Rep... 391 e-107 UniRef50_A6NZ65 Putative uncharacterized protein n=1 Tax=Bactero... 391 e-107 UniRef50_B0MU18 Putative uncharacterized protein n=2 Tax=Bactero... 390 e-107 UniRef50_C1A8M7 ATP-dependent DNA helicase n=1 Tax=Gemmatimonas ... 390 e-107 UniRef50_Q1DC55 ATP-dependent DNA helicase PcrA n=2 Tax=Cystobac... 390 e-106 UniRef50_C7H111 ATP-dependent DNA helicase PcrA n=1 Tax=Eubacter... 390 e-106 UniRef50_UPI0001C37867 ATP-dependent DNA helicase PcrA n=1 Tax=R... 389 e-106 UniRef50_C4FEN7 Putative uncharacterized protein n=3 Tax=Bifidob... 388 e-106 UniRef50_D0LJZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum D... 388 e-106 UniRef50_D1PL59 ATP-dependent DNA helicase n=4 Tax=Ruminococcace... 388 e-106 UniRef50_A0LDC5 ATP-dependent DNA helicase, Rep family n=1 Tax=M... 388 e-106 UniRef50_C8WP33 UvrD/REP helicase n=3 Tax=Coriobacteriaceae RepI... 387 e-106 UniRef50_D2RIV6 ATP-dependent DNA helicase PcrA n=6 Tax=Veillone... 387 e-106 UniRef50_C0R0K3 ATP-dependent DNA helicase n=2 Tax=Brachyspira R... 387 e-106 UniRef50_Q72IS0 DNA helicase uvrD n=3 Tax=Thermus thermophilus R... 387 e-105 UniRef50_B3QF13 UvrD/REP helicase n=9 Tax=Rhizobiales RepID=B3QF... 386 e-105 UniRef50_D2R5I6 UvrD/REP helicase n=1 Tax=Pirellula staleyi DSM ... 386 e-105 UniRef50_Q6MI36 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio ... 386 e-105 UniRef50_Q5PB91 DNA helicase II n=20 Tax=Rickettsiales RepID=Q5P... 385 e-105 UniRef50_D1NAY9 UvrD/REP helicase n=1 Tax=Victivallis vadensis A... 385 e-105 UniRef50_Q04T79 ATP-dependent DNA helicase n=6 Tax=Leptospira Re... 385 e-105 UniRef50_A9ETX5 ATP-depentend DNA helicase n=1 Tax=Sorangium cel... 384 e-105 UniRef50_A6DKH4 UvrD/REP helicase n=1 Tax=Lentisphaera araneosa ... 384 e-105 UniRef50_A6VEA1 ATP-dependent DNA helicase Rep n=102 Tax=Proteob... 383 e-104 UniRef50_Q2GE51 Helicase, UvrD/Rep family n=2 Tax=Neorickettsia ... 383 e-104 UniRef50_C5VHV2 ATP-dependent DNA helicase PcrA n=20 Tax=Bactero... 383 e-104 UniRef50_D0LIZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum D... 383 e-104 UniRef50_A0M3U3 PcrA-like UvrD/Rep family ATP-dependent DNA heli... 383 e-104 UniRef50_C6NTI8 ATP-dependent DNA helicase UvrD/PcrA n=2 Tax=Gam... 382 e-104 UniRef50_Q4FPM1 DNA helicase II n=5 Tax=Bacteria RepID=Q4FPM1_PELUB 381 e-104 UniRef50_C1ZAM6 DNA/RNA helicase, superfamily I n=1 Tax=Planctom... 381 e-104 UniRef50_B2UPY5 UvrD/REP helicase n=2 Tax=Verrucomicrobia RepID=... 380 e-104 UniRef50_Q83GZ5 ATP-dependent DNA helicase n=2 Tax=Tropheryma wh... 380 e-103 UniRef50_A1WZS5 ATP-dependent DNA helicase UvrD n=3 Tax=Gammapro... 380 e-103 UniRef50_Q31JE9 ATP-dependent DNA helicase UvrD n=3 Tax=Gammapro... 379 e-103 UniRef50_Q0AHY9 ATP-dependent DNA helicase UvrD n=16 Tax=Betapro... 379 e-103 UniRef50_A5TXQ2 Superfamily I ATP-dependent helicase n=15 Tax=Fu... 378 e-103 UniRef50_B2V7G3 UvrD/REP helicase n=5 Tax=Aquificales RepID=B2V7... 378 e-103 UniRef50_P03018 DNA helicase II n=409 Tax=cellular organisms Rep... 377 e-103 UniRef50_A6CC22 ATP-dependent DNA helicase n=1 Tax=Planctomyces ... 377 e-103 UniRef50_B2UQR8 UvrD/REP helicase n=2 Tax=Verrucomicrobiaceae Re... 377 e-102 UniRef50_A1TNG2 ATP-dependent DNA helicase UvrD n=11 Tax=cellula... 377 e-102 UniRef50_B5YF03 ATP-dependent DNA helicase PcrA n=2 Tax=Dictyogl... 375 e-102 UniRef50_B1AJE0 ATP-dependent DNA helicase PcrA n=15 Tax=Ureapla... 375 e-102 UniRef50_D2RA55 UvrD/REP helicase n=1 Tax=Gardnerella vaginalis ... 375 e-102 UniRef50_Q68WT1 DNA helicase II n=17 Tax=Rickettsieae RepID=UVRD... 375 e-102 UniRef50_Q6XYV7 ATP-dependent DNA helicase n=2 Tax=Spiroplasma R... 374 e-102 UniRef50_D1J8P0 ATP-dependent helicase n=1 Tax=Mycoplasma homini... 374 e-102 UniRef50_C1TPS7 DNA/RNA helicase, superfamily I n=1 Tax=Dethiosu... 374 e-102 UniRef50_Q7UIR9 ATP-dependent DNA helicase n=2 Tax=Planctomyceta... 373 e-101 UniRef50_A1A2S5 Putative helicase IV n=2 Tax=Bifidobacterium Rep... 372 e-101 UniRef50_D2R6Z4 UvrD/REP helicase n=4 Tax=Planctomycetaceae RepI... 372 e-101 UniRef50_D0RN21 ATP-dependent DNA helicase PcrA n=1 Tax=alpha pr... 371 e-101 UniRef50_B2A5W4 UvrD/REP helicase n=1 Tax=Natranaerobius thermop... 370 e-101 UniRef50_B9AEJ9 Putative uncharacterized protein n=2 Tax=Methano... 370 e-101 UniRef50_B3PNG5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma ar... 370 e-101 UniRef50_Q21PD1 ATP-dependent DNA helicase Rep n=15 Tax=Gammapro... 370 e-100 UniRef50_Q98PM4 ATP-DEPENDENT HELICASE PCRA n=1 Tax=Mycoplasma p... 369 e-100 UniRef50_C0WAB3 ATP-dependent DNA helicase pcrA n=1 Tax=Acidamin... 369 e-100 UniRef50_B2S250 Rep helicase, single-stranded DNA-dependent ATPa... 369 e-100 UniRef50_Q1DAU6 ATP-dependent DNA helicase, UvrD/REP family n=6 ... 369 e-100 UniRef50_Q0AZZ6 ATP-dependent DNA helicase PcrA n=1 Tax=Syntroph... 368 e-100 UniRef50_D2MPE9 Putative ATP-dependent helicase PcrA n=1 Tax=Bul... 368 e-100 UniRef50_P75438 Probable DNA helicase MPN_340 n=1 Tax=Mycoplasma... 368 e-100 UniRef50_B0TWY9 DNA helicase II n=19 Tax=Francisella RepID=B0TWY... 368 e-100 UniRef50_B0VGK7 Superfamily I DNA and RNA helicases n=1 Tax=Cand... 368 e-100 UniRef50_Q5KJH7 ATP-dependent DNA helicase pcra, putative n=2 Ta... 367 e-100 UniRef50_A8R903 Putative uncharacterized protein n=2 Tax=Erysipe... 367 e-100 UniRef50_B2IL96 UvrD/REP helicase n=1 Tax=Beijerinckia indica su... 367 e-100 UniRef50_A1AVZ1 UvrD/REP helicase n=3 Tax=Gammaproteobacteria Re... 367 1e-99 UniRef50_C3RQ43 ATP-dependent DNA helicase n=4 Tax=Bacteria RepI... 367 1e-99 UniRef50_B7C8B0 Putative uncharacterized protein n=1 Tax=Eubacte... 367 1e-99 UniRef50_A7KV33 PcrA helicase n=1 Tax=Bacillus phage 0305phi8-36... 366 1e-99 UniRef50_C8PTM7 ATP-dependent DNA helicase PcrA n=1 Tax=Treponem... 366 1e-99 UniRef50_B2RKD8 ATP-dependent DNA helicase n=5 Tax=Bacteroidetes... 366 2e-99 UniRef50_A5IY88 ATP dependent helicase n=2 Tax=Mycoplasma RepID=... 365 2e-99 UniRef50_Q0EW02 DNA helicase II n=1 Tax=Mariprofundus ferrooxyda... 365 3e-99 UniRef50_Q6MAS4 Probable ATP-dependent DNA helicase, mutU n=1 Ta... 365 4e-99 UniRef50_A6GG96 UvrD/REP helicase n=1 Tax=Plesiocystis pacifica ... 364 5e-99 UniRef50_Q0SMP9 Rep helicase, single-stranded DNA-dependent ATPa... 364 8e-99 UniRef50_D1R4U3 Putative uncharacterized protein n=1 Tax=Parachl... 363 9e-99 UniRef50_C0R2D4 ATP-dependent DNA helicase n=4 Tax=Brachyspira R... 363 1e-98 UniRef50_P44804 ATP-dependent DNA helicase rep n=275 Tax=Proteob... 363 1e-98 UniRef50_C3JBX6 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria... 361 3e-98 UniRef50_C9M511 ATP-dependent DNA helicase PcrA n=2 Tax=Synergis... 361 4e-98 UniRef50_Q2STJ5 ATP-dependent DNA helicase Rep n=90 Tax=Bacteria... 361 4e-98 UniRef50_P45612 Probable DNA helicase II homolog n=4 Tax=Mollicu... 361 5e-98 UniRef50_C3WE38 UvrD/REP helicase n=1 Tax=Fusobacterium mortifer... 361 6e-98 UniRef50_Q256I8 DNA/RNA helicase n=17 Tax=Chlamydiales RepID=Q25... 360 1e-97 UniRef50_B0RZ36 ATP-dependent DNA helicase n=21 Tax=Bacteria Rep... 360 1e-97 UniRef50_C1ZKV9 DNA/RNA helicase, superfamily I n=1 Tax=Planctom... 358 3e-97 UniRef50_Q3F0Y3 ATP-dependent DNA helicase pcrA n=2 Tax=Bacillus... 358 3e-97 UniRef50_Q6KHF5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma mo... 358 3e-97 UniRef50_Q6AJ72 Probable ATP-dependent DNA helicase, UvrD/REP fa... 358 3e-97 UniRef50_B9KCT9 ATP-dependent DNA helicase n=1 Tax=Campylobacter... 358 4e-97 UniRef50_A9M0G6 ATP-dependent DNA helicase n=38 Tax=Betaproteoba... 358 5e-97 UniRef50_B1XW04 UvrD/REP helicase n=41 Tax=Bacteria RepID=B1XW04... 358 6e-97 UniRef50_D0JAI1 ATP-dependent DNA helicase n=2 Tax=Blattabacteri... 358 6e-97 UniRef50_C5TB61 UvrD/REP helicase n=3 Tax=cellular organisms Rep... 357 1e-96 UniRef50_C2KQX4 Possible UvrD/REP helicase n=3 Tax=Mobiluncus Re... 357 1e-96 UniRef50_C9RM93 UvrD/REP helicase n=1 Tax=Fibrobacter succinogen... 356 2e-96 UniRef50_C2ME74 ATP-dependent DNA helicase PcrA n=1 Tax=Porphyro... 356 2e-96 UniRef50_B0SSS8 ATP-dependent DNA helicase PcrA n=6 Tax=Leptospi... 356 2e-96 UniRef50_A0LVT3 UvrD/REP helicase n=1 Tax=Acidothermus celluloly... 355 3e-96 UniRef50_B2A3D2 UvrD/REP helicase n=1 Tax=Natranaerobius thermop... 355 3e-96 UniRef50_Q4PDX2 Putative uncharacterized protein n=1 Tax=Ustilag... 355 4e-96 UniRef50_C8P127 ATP-dependent DNA helicase PcrA n=1 Tax=Erysipel... 353 1e-95 UniRef50_A8Q3F1 Putative uncharacterized protein n=1 Tax=Malasse... 353 2e-95 UniRef50_B0KVA6 Putative UvrD/REP helicase n=1 Tax=uncultured ca... 353 2e-95 UniRef50_C9RKG0 UvrD/REP helicase n=1 Tax=Fibrobacter succinogen... 352 2e-95 UniRef50_A5UVF1 ATP-dependent DNA helicase, Rep family n=6 Tax=C... 352 2e-95 UniRef50_B9XNK2 UvrD/REP helicase n=2 Tax=Verrucomicrobiales Rep... 352 3e-95 UniRef50_B2S4R5 DNA helicase II n=3 Tax=Treponema RepID=B2S4R5_T... 352 3e-95 UniRef50_UPI0000E87DAA UvrD/REP helicase n=1 Tax=Methylophilales... 351 4e-95 UniRef50_UPI0001C42BC3 ATP-dependent DNA helicase n=1 Tax=Bacill... 351 4e-95 UniRef50_B3DUG1 ATP-dependent DNA helicase UvrD/PcrA n=1 Tax=Met... 351 5e-95 UniRef50_Q8EUN0 ATP-dependent DNA helicase n=1 Tax=Mycoplasma pe... 351 7e-95 UniRef50_Q67LG5 ATP-dependent DNA helicase n=1 Tax=Symbiobacteri... 349 2e-94 UniRef50_C5BBB0 ATP-dependent DNA helicase Rep, putative n=2 Tax... 348 3e-94 UniRef50_Q5WF16 UvrD/REP family ATP-dependent DNA helicase n=1 T... 348 3e-94 UniRef50_A7Z3H2 YjcD n=3 Tax=Bacillus RepID=A7Z3H2_BACA2 348 3e-94 UniRef50_Q018Z5 ATP-dependent DNA helicase (ISS) n=1 Tax=Ostreoc... 348 3e-94 UniRef50_C6XGC2 DNA helicase II n=1 Tax=Candidatus Liberibacter ... 348 5e-94 UniRef50_Q6MND7 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio ... 347 7e-94 UniRef50_D1B9M8 UvrD/REP helicase n=1 Tax=Thermanaerovibrio acid... 347 7e-94 UniRef50_C7M335 UvrD/REP helicase n=1 Tax=Acidimicrobium ferroox... 347 7e-94 UniRef50_O31626 Putative ATP-dependent DNA helicase yjcD n=3 Tax... 347 7e-94 UniRef50_B8FB90 UvrD/REP helicase n=1 Tax=Desulfatibacillum alke... 347 8e-94 UniRef50_C6NVE2 ATP-dependent DNA helicase Rep n=1 Tax=Acidithio... 347 8e-94 UniRef50_B0DAK6 Predicted protein n=1 Tax=Laccaria bicolor S238N... 347 9e-94 UniRef50_A7HBX8 UvrD/REP helicase n=7 Tax=Cystobacterineae RepID... 347 9e-94 UniRef50_Q4A5L9 Atp-dependent helicase n=2 Tax=Mycoplasma synovi... 346 1e-93 UniRef50_A4IYZ2 ATP-dependent DNA helicase/UvrD/REP helicase n=2... 346 1e-93 UniRef50_A6CGD0 ATP-dependent DNA helicase n=1 Tax=Planctomyces ... 346 2e-93 UniRef50_C6HUX3 Putative ATP-dependent DNA helicase, UvrD/REP fa... 345 3e-93 UniRef50_D0L0Z4 UvrD/REP helicase n=1 Tax=Halothiobacillus neapo... 344 6e-93 UniRef50_P57654 ATP-dependent DNA helicase rep n=4 Tax=Buchnera ... 343 1e-92 UniRef50_B2KB12 UvrD/REP helicase n=1 Tax=Elusimicrobium minutum... 343 1e-92 UniRef50_B3SEY0 Putative uncharacterized protein (Fragment) n=1 ... 343 1e-92 UniRef50_C1E652 ATP-dependent DNA helicase n=2 Tax=Micromonas Re... 343 1e-92 UniRef50_A0LFK0 ATP-dependent DNA helicase, Rep family n=1 Tax=S... 342 3e-92 UniRef50_C4R3W4 DNA helicase and DNA-dependent ATPase n=1 Tax=Pi... 342 3e-92 UniRef50_UPI000023F08A hypothetical protein FG08405.1 n=1 Tax=Gi... 341 5e-92 UniRef50_B5YD55 ATP-dependent DNA helicase n=2 Tax=Dictyoglomus ... 340 9e-92 UniRef50_A8ZTY6 UvrD/REP helicase n=1 Tax=Desulfococcus oleovora... 340 9e-92 UniRef50_A5WC18 UvrD/REP helicase n=2 Tax=Psychrobacter RepID=A5... 340 1e-91 Sequences not found previously or not previously below threshold: UniRef50_A8LAX0 ATP-dependent DNA helicase PcrA n=6 Tax=Bacteria... 409 e-112 UniRef50_D1BXF2 ATP-dependent DNA helicase PcrA n=5 Tax=Actinomy... 406 e-111 UniRef50_B0MNA1 Putative uncharacterized protein n=3 Tax=Clostri... 357 8e-97 UniRef50_C6A914 DNA helicase II n=11 Tax=Bifidobacterium RepID=C... 341 4e-92 >UniRef50_P15038 Helicase IV n=169 Tax=cellular organisms RepID=HELD_ECOLI Length = 684 Score = 686 bits (1770), Expect = 0.0, Method: Composition-based stats. Identities = 684/684 (100%), Positives = 684/684 (100%) Query: 1 MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLAIHCKRGLVWGELEFV 60 MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLAIHCKRGLVWGELEFV Sbjct: 1 MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLAIHCKRGLVWGELEFV 60 Query: 61 LPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENKWL 120 LPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENKWL Sbjct: 61 LPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENKWL 120 Query: 121 TREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEA 180 TREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEA Sbjct: 121 TREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEA 180 Query: 181 MLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEAS 240 MLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEAS Sbjct: 181 MLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEAS 240 Query: 241 PEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDT 300 PEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDT Sbjct: 241 PEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDT 300 Query: 301 AARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWV 360 AARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWV Sbjct: 301 AARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWV 360 Query: 361 SLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIV 420 SLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIV Sbjct: 361 SLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIV 420 Query: 421 ILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQM 480 ILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQM Sbjct: 421 ILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQM 480 Query: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL 540 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL Sbjct: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL 540 Query: 541 LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQ 600 LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQ Sbjct: 541 LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQ 600 Query: 601 QADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWAL 660 QADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWAL Sbjct: 601 QADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWAL 660 Query: 661 FNKENPSPFVEILKNLDVPVARKP 684 FNKENPSPFVEILKNLDVPVARKP Sbjct: 661 FNKENPSPFVEILKNLDVPVARKP 684 >UniRef50_A9ZEX9 Helicase IV (75 kDa helicase) n=15 Tax=Enterobacteriaceae RepID=A9ZEX9_YERPE Length = 661 Score = 623 bits (1606), Expect = e-176, Method: Composition-based stats. Identities = 456/684 (66%), Positives = 543/684 (79%), Gaps = 23/684 (3%) Query: 1 MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLAIHCKRGLVWGELEFV 60 MELKAT+ GK L+QHPY+R +LNAGI+V GD+H+YLIPFNQL++I CKRG+VWGELEF Sbjct: 1 MELKATSFGKHLSQHPYNRVRLLNAGIEVCGDKHQYLIPFNQLVSIQCKRGIVWGELEFE 60 Query: 61 LPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENKWL 120 LP +KVVRLHGTEW ETQ FYH+L W++WS EMS++ + VL +Q++ I ++KW Sbjct: 61 LPQQKVVRLHGTEWQETQHFYHYLLGVWQQWSEEMSQVCAEVLHKQVESIKRIEQQDKWF 120 Query: 121 TREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEA 180 R + +Q IR+A SALP+PV RL F++CR + C WL+ + + NQ +T Sbjct: 121 KRSELGQIQVMIREAFSALPMPVERLAAFESCRADYECCLRWLQQGRHSVERCNQQWTAR 180 Query: 181 MLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEAS 240 ML EY DFF+ VE+SPLN +Q+RAVVNGE S+LVLAGAGSGKTSVLVARAGWLL R EA Sbjct: 181 MLEEYQDFFQNVETSPLNASQSRAVVNGEDSVLVLAGAGSGKTSVLVARAGWLLRRNEAL 240 Query: 241 PEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDT 300 PEQILLLAFGR+AA+EM+ RI++RL + I A+TFHALALHIIQQGS+K P++SKLE+D+ Sbjct: 241 PEQILLLAFGRQAADEMNSRIKQRLGVDSIQAKTFHALALHIIQQGSRKTPVISKLESDS 300 Query: 301 AARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWV 360 AR L I W++QCSEKKAQ D++L RLASRL+RWV Sbjct: 301 QARRALLIQHWQQQCSEKKAQ-----------------------DKRLAARLASRLERWV 337 Query: 361 SLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIV 420 LMRM+GG+QAEMI A +E+RDLF KRI+LMAPLLKAWK ALK E AVDFSGLIHQA+ Sbjct: 338 GLMRMYGGSQAEMIEQANDEVRDLFQKRIRLMAPLLKAWKTALKDEGAVDFSGLIHQAVN 397 Query: 421 ILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQM 480 +LEKGRF+SPWKH+LVDEFQDISPQRA LLAALRKQN QT LFAVGDDWQAIYRFSGA++ Sbjct: 398 LLEKGRFVSPWKHVLVDEFQDISPQRAMLLAALRKQNKQTCLFAVGDDWQAIYRFSGAEL 457 Query: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL 540 SLTTAF E+FGEG C LDTTYRFN RIG++ANRFIQQNP QLKKPLNSL+ G+KK+V + Sbjct: 458 SLTTAFSEHFGEGAECALDTTYRFNDRIGDIANRFIQQNPYQLKKPLNSLSKGNKKSVMI 517 Query: 541 LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQ 600 L + QL+ALLDKLSG+ K ERILILARYHH+RP L+KAATRWPKL IDFMTIHASKGQ Sbjct: 518 LPDEQLEALLDKLSGFVKDGERILILARYHHLRPEVLQKAATRWPKLTIDFMTIHASKGQ 577 Query: 601 QADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWAL 660 QADYVIIVGL EG+DGFPAAARES++E+ LLPP EDFPDAEERRL+YVA+TRA+H+VW L Sbjct: 578 QADYVIIVGLHEGNDGFPAAARESVLEDVLLPPPEDFPDAEERRLLYVAITRAKHQVWLL 637 Query: 661 FNKENPSPFVEILKNLDVPVARKP 684 + PS FV L L V RKP Sbjct: 638 QDTARPSIFVSQLSELGALVQRKP 661 >UniRef50_D0YXK5 DNA helicase IV n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0YXK5_LISDA Length = 701 Score = 597 bits (1540), Expect = e-169, Method: Composition-based stats. Identities = 254/695 (36%), Positives = 374/695 (53%), Gaps = 18/695 (2%) Query: 1 MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLL-AIHCKRGLVWGELEF 59 M+L A+ L + L Q Y + + + + I F+ +I RG++WG LE Sbjct: 7 MQLSASRLAQWLVQGDYYSIELQDNRLVLESQTETDEISFDDWDGSIDVHRGVMWGTLEL 66 Query: 60 VLPDEKVV-RLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENK 118 D+K +HG W E + F L ++ W+ L + L I TG+ Sbjct: 67 TSSDQKYCWTVHGLPWRECKPFAQDLVQTYQNWAHARVAKLDAALPEMLKRIHAFTGQKG 126 Query: 119 WLTREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYT 178 +L + + Q + +L L F +A+ WL D + +HN+ + Sbjct: 127 YLRDSEHDDLYQLLTSSLEHSELTPELAASFRP--KAFEHILPWLGDNDVWVDEHNKKWI 184 Query: 179 EAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGE 238 E ++ +F ESSPLNP+Q AV+ + LVLAGAGSGKTSVLVARAG+L+A + Sbjct: 185 EKESNKWGSWFDSFESSPLNPSQREAVLINQDHNLVLAGAGSGKTSVLVARAGYLIASQK 244 Query: 239 ASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLEN 298 A PE+IL+LAFGR A+EEM+ R+R ++ ++ + TFH+L II+Q + P VS + Sbjct: 245 ALPEEILMLAFGRMASEEMNARMRTKV-SDRVKVATFHSLGTEIIRQVEHERPNVSPIAL 303 Query: 299 DTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDR 358 D AR +Q + K A AK W++ LT+ + N + + + + + R Sbjct: 304 DDKARSAWIARMLMEQWN-KPASAKRWQRHLTQWRIPGFSKENSMEQQAENEQTINWIWR 362 Query: 359 WVSLMRMHGGAQAEMIAS----APEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGL 414 + L+ G + +++ + +R ++L+ P +A++ LK + +DF+ + Sbjct: 363 HIELLGQRGATKEQLLNDIQDSSNPAMRPRMKSELELLWPCYEAYQQHLKVKKQIDFNSM 422 Query: 415 IHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQ-----TTLFAVGDDW 469 I A +++G+FISPW+ ++VDE+QDISP R +L+ AL + TLFAVGDDW Sbjct: 423 IKVATQYVKEGKFISPWRFVMVDEYQDISPLRLSLIEALCQPQPNSDKAAPTLFAVGDDW 482 Query: 470 QAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS 529 QAIYRF+G+ ++LTT F E FG L TTYRFN+ IG+VAN F+QQNP Q+KK L S Sbjct: 483 QAIYRFAGSDVNLTTDFEERFGATHITQLSTTYRFNNMIGDVANVFVQQNPMQVKKELTS 542 Query: 530 LTNGDKKAVTLLDESQLDALLDKL-SGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 KKAVTLL + + L +L Y + +LIL R + RPA LE +WP+L Sbjct: 543 FKKQKKKAVTLLAQDFILQELGQLAKRYEGKQTNVLILGRNNKQRPAKLEAWQEQWPQLN 602 Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + +MT HASKGQ+A YV IV + +G FP RE+ + L E + DAEERRL YV Sbjct: 603 LQYMTCHASKGQEAQYVFIVDVNKGI--FPTLDRETGLASILQSRAETYADAEERRLFYV 660 Query: 649 ALTRARHRVWALFNKENPSPFVEILKNLDVPVARK 683 ALTRA+ V+ N N SPF+ L PV K Sbjct: 661 ALTRAKKHVYVCANPMNVSPFINELIEDKYPVDNK 695 >UniRef50_Q6LST7 Hypothetical helicase IV n=5 Tax=Gammaproteobacteria RepID=Q6LST7_PHOPR Length = 694 Score = 597 bits (1540), Expect = e-169, Method: Composition-based stats. Identities = 249/693 (35%), Positives = 372/693 (53%), Gaps = 16/693 (2%) Query: 1 MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLA-IHCKRGLVWGELEF 59 M L A+ L + Q Y + + + I F+ I RG+VWG LE Sbjct: 1 MRLSASVLAQWFVQGDYFSIELNEHSLTLDSQTETSTISFDDWDGAIEVHRGVVWGSLEL 60 Query: 60 VLPDEKVV-RLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENK 118 D++ +HG W + + F L +R W+ + L L+ I + + Sbjct: 61 TSADQQYCWTIHGLPWQQCKPFAARLLESYRDWAHGRVDRLDKALPDVLNRINSFATQQG 120 Query: 119 WLTREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYT 178 +L + + + + +L L F A+ + + WL+ ++N+ + Sbjct: 121 YLRESEHDNLCKFLDDSLKTTGLTPELAASFRPM--AFERIEPWLEGNGDWVEENNREWL 178 Query: 179 EAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGE 238 + +++ +F + E+SPLN +Q AV+ + LVLAGAG+GKTSVLVARAG+L+A Sbjct: 179 TSEAEKWSSWFDKFETSPLNSSQREAVLINQDHNLVLAGAGTGKTSVLVARAGYLVANQA 238 Query: 239 ASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLEN 298 A PE+IL+LAFGR AAEEM ER+ +++ I TFHAL IIQ + P VS L Sbjct: 239 AQPEEILMLAFGRNAAEEMRERLALKVN-NRIKVATFHALGTQIIQSVENERPNVSPLAL 297 Query: 299 DTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDR 358 D A+ + I K+ E A AK W++ LT+ N + + +LAS + R Sbjct: 298 DDKAKAQW-ITSTLKEQWESAASAKRWQKHLTQWRIPGFKADNSMEQQAKNEQLASWVWR 356 Query: 359 WVSLMRMHGGAQAEMIASAPEEIRDLFSKRIK----LMAPLLKAWKGALKAENAVDFSGL 414 + L+ G ++++++A + +R+K L+ P +A++ LK+ +DF+ + Sbjct: 357 HIELIGQSGLSKSDLVAIIDKSNNPATKQRMKSELGLLWPCFRAYEQHLKSNKQIDFNTM 416 Query: 415 IHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQ----NSQTTLFAVGDDWQ 470 I +A+ + G+F+ W+ I+VDE+QDISPQR +L+ AL + + TLFAVGDDWQ Sbjct: 417 IQKAVEYVNDGKFVPEWRFIMVDEYQDISPQRLSLIEALCRSEEETKPRPTLFAVGDDWQ 476 Query: 471 AIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSL 530 AIYRF+GA ++LTT F + FG +LDTTYRFNS IGEVAN FIQQNP QL+K L S Sbjct: 477 AIYRFAGADVNLTTGFADRFGSSHITELDTTYRFNSMIGEVANTFIQQNPQQLRKDLTSH 536 Query: 531 TNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQID 590 +KAVTLL + L+ L +L+ + +L+L R + RP L+ T+WP+L + Sbjct: 537 KKQKRKAVTLLCQDLLEQELVQLASQNEKPVTVLLLGRNNKQRPEKLKAWQTQWPQLNMT 596 Query: 591 FMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVAL 650 FMT H SKG++AD+V I+ + G P RE+ + L E + DAEERRL YVAL Sbjct: 597 FMTCHGSKGREADFVFILDVNRGVFPAPE--RETGLAACLQSKNEGYADAEERRLFYVAL 654 Query: 651 TRARHRVWALFNKENPSPFVEILKNLDVPVARK 683 TRA+ VW + E S FV L + V K Sbjct: 655 TRAKKHVWVCADPEKTSSFVNELIDDKYAVMNK 687 >UniRef50_A5EZU3 Helicase IV n=56 Tax=Vibrionales RepID=A5EZU3_VIBC3 Length = 699 Score = 568 bits (1465), Expect = e-160, Method: Composition-based stats. Identities = 253/693 (36%), Positives = 369/693 (53%), Gaps = 17/693 (2%) Query: 1 MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLA-IHCKRGLVWGELEF 59 M+L A + + Y + + + ++ E IPF+ + +RG+ WG L+F Sbjct: 13 MQLNANKTAQFFIANEYYQVQLEKEWLVLTSLSSEERIPFHVWNGEVQIRRGVFWGTLQF 72 Query: 60 VLPDEKVVR----LHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTG 115 E+ V+ + G W E + F H L AH++ W E S + ++ Sbjct: 73 FAHPEEGVQRSWLVQGLPWPECRHFAHQLVAHYQAWHNRQCEQLSLYFPRWQQELSRLKR 132 Query: 116 ENKWLTREQTSGVQQQIRQALSALPLPVNRLEEFDNC-REAWRKCQAWLKDIESARLQHN 174 +L+ V+ + Q + L L L E + WL D + + N Sbjct: 133 LPSFLSHS---SVEAWVAQVYADLKLMDMTLHEAQKHLPTVFDTLLPWLLDTSATLYERN 189 Query: 175 QAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLL 234 +A+ E + F Q ESSPLN +Q AV+ + LVLAGAGSGKTSVL AR +LL Sbjct: 190 KAWLEIERANWTVLFSQCESSPLNVSQQYAVLLNDDHNLVLAGAGSGKTSVLTARVSYLL 249 Query: 235 ARGEASPEQILLLAFGRKAAEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPI 292 A PEQILL+AF R AA+EM ER++ ++ E + TFH L L II + K I Sbjct: 250 QSHLAKPEQILLVAFARDAAQEMAERLKNKIGLEAERLHINTFHQLGLRIINRVEGKTVI 309 Query: 293 VSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRL 352 +S L ND+ + I +W K+ K W++ L + + + +L Sbjct: 310 MSPLANDSKLKQAWCI-DWLKRHWMTPTNFKRWQKHLAKWPIAYLAGDDELGSHVENPKL 368 Query: 353 ASRLDRWVSLMRMHGGAQAEMIASA-PEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDF 411 + L++ + + G ++ E+ + + + L P +AW+ LK +N +DF Sbjct: 369 IAWLEKQLDQLAQMGLSKKELQERLVDHDDYPRLNSELSLCWPCYQAWQQMLKDQNQIDF 428 Query: 412 SGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQN-SQTTLFAVGDDWQ 470 + +I +A +EKG+F SPWK I+VDE+QDISPQR LL AL +QN Q LFAVGDDWQ Sbjct: 429 NIMITRATEYVEKGKFRSPWKFIMVDEYQDISPQRLRLLQALCEQNQGQCNLFAVGDDWQ 488 Query: 471 AIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSL 530 +IY+F+G+ + LTT F F LDTTYRFN +IG VANRFIQQNP QL K LNS Sbjct: 489 SIYQFAGSDVDLTTGFASRFAHSTVHHLDTTYRFNDQIGAVANRFIQQNPHQLPKTLNSF 548 Query: 531 TNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQID 590 +KAV L ++ +LD+++ + +L+L R H+ +P L+ R+ L++D Sbjct: 549 KTQKQKAVMLAPNHSVEKILDEINRSTNKLKTVLLLGRNHYHKPELLKDWQNRYLSLKLD 608 Query: 591 FMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVAL 650 FMT HASKG++ADYVII+ + EG FPA + +++AL +DFP AEERRL YVAL Sbjct: 609 FMTCHASKGKEADYVIILAVDEGQ--FPARVKALHLDDALNQSEDDFPYAEERRLFYVAL 666 Query: 651 TRARHRVWALFNKENPSPFVEILKNLDVPVARK 683 TRA+ +VW +N S FV+ L N D PV ++ Sbjct: 667 TRAKEKVWVTYNGNG-SSFVQELLNDDYPVVKQ 698 >UniRef50_D0IB53 DNA helicase IV n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0IB53_VIBHO Length = 694 Score = 546 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 246/696 (35%), Positives = 359/696 (51%), Gaps = 24/696 (3%) Query: 1 MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLA-IHCKRGLVWGELEF 59 M+L A+ L + Q + V+ + +PF+ RGLVWG L F Sbjct: 1 MKLSASNLAQWFVQGAHYSIVLDEEQLVFESKHMTETVPFSIWDGQCRVSRGLVWGRLTF 60 Query: 60 VLPDE----KVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTG 115 V+ + + ++G W + + + ++ W G+ V + + L Sbjct: 61 VVSPADQPARTLTVYGLPWRKVHAYAGKVTEQYQCWLGKQQSKFMLVEHELVALRDVLRD 120 Query: 116 ENKWLTREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQ 175 +L E QQ+ R+ + + + ++ WL++ E+ R N Sbjct: 121 HRGYLRVEDLKAWQQKAREVFERCNIHPQVMATANP--SLYQALYGWLQNGEAQRAARNA 178 Query: 176 AYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLA 235 + + L ++ +F VE+SPLN +Q +AV+ ++ L+LAGAGSGKTSVL+ARA +L+A Sbjct: 179 QWCDGELERWSGWFDGVEASPLNASQRQAVLMDDNHNLLLAGAGSGKTSVLMARAQYLVA 238 Query: 236 RGEASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSK 295 + P +IL+LAFG+KA+EEM R+ + + TFHA AL +I++ S + V+ Sbjct: 239 SQQTEPSRILMLAFGKKASEEMAGRLEKA-GLHGVETSTFHAFALKVIREISGQEAKVAP 297 Query: 296 LENDTAARHELF---IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRL 352 L D A+H +AE Q + +K K QW + P D KLQ L Sbjct: 298 LATDEEAKHSWLTLWLAENLAQPAVEKRWLKHLEQWSVPGLTRERPLVEQAHDGKLQTWL 357 Query: 353 ASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFS 412 LD V + +A + E L+ P+LK + ALK + A DF+ Sbjct: 358 WRHLDLLVQQSQPATAIRAVIKGDEKAE------SEFALVQPVLKGYLNALKEQKAQDFN 411 Query: 413 GLIHQAIVIL--EKGRFISPWKHILVDEFQDISPQRAALLAALRKQ--NSQTTLFAVGDD 468 GLI +A +L + F + + HI+VDE+QDISP R ALL AL N +LFAVGDD Sbjct: 412 GLIREATKLLSKKSETFGARYDHIMVDEYQDISPARLALLEALCGGKRNRAPSLFAVGDD 471 Query: 469 WQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLN 528 WQAIYRF+G+ +SLTT F F G LDTTYRFNS+IGEVANRFIQ +P QL KPLN Sbjct: 472 WQAIYRFAGSDVSLTTGFMNRFPAGVIRYLDTTYRFNSQIGEVANRFIQVDPQQLNKPLN 531 Query: 529 SLTNGDKKAVTLLDESQLDALLDKL-SGYAKPEERILILARYHHMRPASLEKAATRWPKL 587 S KKAV L+ +D++L+KL +L++ R + RP+ LE+ +P L Sbjct: 532 SQRIQKKKAVHLMPSEAIDSVLEKLAKSAGDKGASVLLIGRNNANRPSRLEEWQQGYPSL 591 Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 + ++T HASKG +AD+ +++ + EG FPA + +E ALL + AEERRL Y Sbjct: 592 SVTYVTAHASKGLEADFTLLLDVNEGV--FPARSATEGLEAALLKVDGEMEHAEERRLFY 649 Query: 648 VALTRARHRVWALFNKENPSPFVEILKNLDVPVARK 683 VALTRA+H W + E PS FV+ L PV K Sbjct: 650 VALTRAKHECWIFADPEKPSVFVKELWQGSYPVTSK 685 >UniRef50_Q5E4C9 DNA helicase IV n=3 Tax=Aliivibrio RepID=Q5E4C9_VIBF1 Length = 687 Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats. Identities = 237/693 (34%), Positives = 368/693 (53%), Gaps = 20/693 (2%) Query: 1 MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLA-IHCKRGLVWGELEF 59 M++KAT + L Q + + + + + +++ +PF++ + +RGL+WG L F Sbjct: 1 MQIKATPFAQWLVQGDFYQLELEQEQLLFTSHKYQVSVPFDKWSGKVTFERGLIWGALCF 60 Query: 60 VLPDEKVV-RLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENK 118 +E+V R+ G W E + + + W + + + Q ++LI + + Sbjct: 61 YNRNEQVAWRVSGLPWEECDAIINAVLNAYADWKESKVLLLNQLQPQMIELIENFSANKR 120 Query: 119 WLTREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYT 178 +L + + + +++ + + E+ WL + E N + Sbjct: 121 FLKQTEALMMVEKLYDLFEQTKISIPLAEQLQPDC--IAPVIDWLTEPEEQLKVLNDNWL 178 Query: 179 EAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGE 238 E E+ FF + ES PLN +Q A++ E LVLAGAGSGKTSVLVAR +L+ G+ Sbjct: 179 EEQKVEWKTFFSECESQPLNESQQSALLLNEDHTLVLAGAGSGKTSVLVARVNYLIQSGQ 238 Query: 239 ASPEQILLLAFGRKAAEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSK 295 A ++ILLLAFGR+AA+EM RI ++L + + TFH L L II+ + P +S Sbjct: 239 AQADEILLLAFGRQAAQEMSGRIIDKLGFEIGQRVKVATFHQLGLDIIRHVEYQQPKLSC 298 Query: 296 LENDTAARHELFIAEWRKQCSE---KKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRL 352 L D AR E F+ + K ++W ++ V +EKLQ L Sbjct: 299 LVTDVKARKEWFVHVLDSEWKNATAMNRWKKHLKKWPIAYLRGDVDLREESHNEKLQEWL 358 Query: 353 ASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFS 412 ++ + SL ++ + + ++ P KA++ LK E+A+D+ Sbjct: 359 YKQICQLNSLQLDKKSIVEKIEFHPDVQ---RLKSELNIVWPFFKAYERTLKHEDAIDYE 415 Query: 413 GLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALR----KQNSQTTLFAVGDD 468 +I +A + ++ PW ++VDE+QDISPQR L+ A+ K ++ TLFAVGDD Sbjct: 416 SMITKAKAYIADNKYELPWSFVMVDEYQDISPQRLDLIEAICHTENKHQTKATLFAVGDD 475 Query: 469 WQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLN 528 WQAIYRF+GA +SLTT F F + L TTYRFN +IG VANRF+Q+NP QLKK LN Sbjct: 476 WQAIYRFAGADVSLTTGFEHRFQSTQIAHLSTTYRFNDQIGAVANRFVQENPMQLKKELN 535 Query: 529 SLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 S T +KAV +++ ++ L LS + E+++IL R H+ +P S ++ +P L Sbjct: 536 SFTKKKRKAVKVIEHQSIEKELLSLSKNIRDGEKVVILGRNHNHKPDSFDEWVKFYPGLN 595 Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 +++ T HASKG +ADYV IV + +G FP R ++ ALLP E FP AEERRL YV Sbjct: 596 LEYNTCHASKGTEADYVFIVEMTDGQ--FPMKERAESLDTALLPHAESFPYAEERRLFYV 653 Query: 649 ALTRARHRVWALFNKENPSPFVEILKNLDVPVA 681 ALTRA+ +VW +++ PSPFV+ + + D PV Sbjct: 654 ALTRAKKKVWIVYHG-KPSPFVQEIVDKDYPVI 685 >UniRef50_C4LER9 UvrD/REP helicase n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LER9_TOLAT Length = 698 Score = 519 bits (1337), Expect = e-145, Method: Composition-based stats. Identities = 228/697 (32%), Positives = 354/697 (50%), Gaps = 30/697 (4%) Query: 2 ELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLAI-HCKRGLVWGELEFV 60 E+K L L +HP + + G+++S + + ++PF+++ ++ KR L W L V Sbjct: 5 EIKNNWLTNLLFRHPASVLTLQSKGLQISDGKKKMVLPFSRMSSLPKIKRRLFWSHLS-V 63 Query: 61 LPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENKWL 120 +K G + ++F L+ + + + +Q I T + + Sbjct: 64 TTAKKSYLYKGFSASQLRQFSELLNDSLKLHVQQQLQAEYQEAKQLKTEIQTFLDASSFR 123 Query: 121 TREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEA 180 Q + ++ R+ L + + + A + ++ E + N + + Sbjct: 124 RSSQCRHLVERCRRLLKNTSVYLRECFATSSQLAALKYSADFVSFAEEKVKRANTKFLKQ 183 Query: 181 MLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEAS 240 L FF +E + L AQ +A + E LVLAGAG+GKTS ++ RAG+LL +A Sbjct: 184 ELLRCQSFFDHIEKNTLTLAQRKACIINEDHNLVLAGAGTGKTSTMIGRAGYLLVTAQAQ 243 Query: 241 PEQILLLAFGRKAAEEMDER----IRERLHTEDITARTFHALALHIIQQGSKKVPIVSKL 296 PE+IL+LAF +KAA EM ER +R L +TFHAL L II + K P+++ Sbjct: 244 PEKILMLAFAKKAAGEMQERQDKCLRPLLKNATPVIKTFHALGLEIIGKVEGKWPVITPF 303 Query: 297 ENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRL 356 + AA + FI + Q +A K Q+ T+ +A L Sbjct: 304 VENNAAFMQ-FIGDVIGQLMMNEAYKKKVSQFCTDRAYPKSAADFSL-------LIADFL 355 Query: 357 DRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIH 416 + + H A + FS + L P+L A++ L N +DF+ +I Sbjct: 356 LLFK---QSHLTFPAFATDIKKQRSSVRFSLFLSLFQPVLAAYEQHLTERNEIDFADMIG 412 Query: 417 QAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFS 476 +AI +E GR+ SP++HILVDEFQDIS +RA LL AL Q T LFAVGDDWQ+IYRF+ Sbjct: 413 KAIEYVESGRYCSPYQHILVDEFQDISQERARLLKALLAQRDDTVLFAVGDDWQSIYRFT 472 Query: 477 GAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKK 536 G+ +++T F FG LDTT+RFN++IGEVA+ F+ +NP Q+ K +NS + Sbjct: 473 GSDINITRQFESIFGATATTALDTTFRFNNKIGEVASGFVLKNPEQINKTINSASIVAHP 532 Query: 537 AVTLLDESQLDALLDKLSG--------YAKPEERILILARYHHMRPASLE-----KAATR 583 AV+L+ S + L ++ Y++ + + +LAR++ + + + Sbjct: 533 AVSLVQASVSERGLHQVLHHLNQDVPVYSEQKTSVAVLARFNFLLGDDSPVILKRQMEFQ 592 Query: 584 WPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEER 643 +P L I+FM++HASKG++ADYVI +G+ G GFP+ + E LLP E F AEER Sbjct: 593 YPYLDIEFMSVHASKGKEADYVIALGMNNGKYGFPSLKETDPILEFLLPEKETFSYAEER 652 Query: 644 RLMYVALTRARHRVWALFNKENPSPFVEILKNLDVPV 680 RL YVALTRARHRV+ +++ PSPF+ L N PV Sbjct: 653 RLFYVALTRARHRVYLVYHPAEPSPFISELINQKYPV 689 >UniRef50_A4CC59 DNA helicase IV n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CC59_9GAMM Length = 707 Score = 484 bits (1246), Expect = e-135, Method: Composition-based stats. Identities = 216/688 (31%), Positives = 315/688 (45%), Gaps = 27/688 (3%) Query: 12 LAQHPYDRAVILNAGIKVSGDRHEYLIPF-NQLLAIHCKRGLVWGELEFVLPDEKVVRLH 70 L Q + + + I + + + I K G L V + Sbjct: 18 LLQKNNRVITYNSMTVTILQGNQSQTIAWCDIIKPITLKTSWFGGRLTLVTAA-QTFSFK 76 Query: 71 GTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENKWLTREQTSGVQQ 130 + Q L W + + QQL ++ + ++ Sbjct: 77 WLRYDSEQTHQQALLDCWINIHQIKLNTSLRDITQQLT--------KRYFKSSEKPSLEH 128 Query: 131 QIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEAMLTEYADFFR 190 +I Q S +++ + + ++ E Q + + LT Y FF Sbjct: 129 KISQLASTWLGLADKMTLSQDIVASIKQLDTLYPLDEQKTRQFRAYFVQNELTRYKLFFD 188 Query: 191 QVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFG 250 + S P+ P Q +A V + + LVLAGAGSGKTSV+V R G+LL G A P QIL+LA+G Sbjct: 189 KQNSHPMTPKQRQACVINDDNNLVLAGAGSGKTSVMVGRVGYLLQSGLAKPSQILMLAYG 248 Query: 251 RKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 + AA+EMD R++ L DI TFH+LAL II Q +P +S D A R + Sbjct: 249 KDAAQEMDLRLKNSLQRHDIKCATFHSLALSIINQVQGVMPNISVFATDAATRKSWLTEQ 308 Query: 311 WRKQCSEKKAQAKGWRQWLTE---EMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 + + + + K L + E + S D + + L + Sbjct: 309 FHYLINRQLSYKKQVIDLLNQVNMEAKKSFSHKTTIDQLLSHSDFVNLQTHVLGLFDLIR 368 Query: 368 GAQAEMIASAPEEIRDLFSKRIK----LMAPLLKAWKGALKAENAVDFSGLIHQAIVILE 423 A + + ++ L+ PL+ A++ L + AVDF +I QA ++ Sbjct: 369 SAASALSGVPQYFDDKCTQATLEHYFMLVKPLIDAYQSKLHQQQAVDFDDMIFQAHNMIH 428 Query: 424 KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 G+F +PW HILVDEFQDIS RA LL ALR + LFAVGDDWQ+IYRFSG+ Sbjct: 429 TGKFKAPWLHILVDEFQDISEPRAQLLKALRDNTHGSVLFAVGDDWQSIYRFSGSNHHFI 488 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDE 543 T F FG +LD T+RFN++I EVANRF+ QNP Q+KK LNS +VT++ + Sbjct: 489 TQFQRYFGASCTVNLDQTFRFNNKIAEVANRFVMQNPAQMKKELNSKVIQSHSSVTIITD 548 Query: 544 ----------SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 + L + K IL + A + R+ L I+ T Sbjct: 549 FNTEKQNANVQAIIDALSFIDKTQKASVYILARFSFLLPNAAQMGLLTQRFKHLIIESYT 608 Query: 594 IHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRA 653 +H+SKG++ADYVI+VGL EG GFPA +++ +A LPP +D+ AEERRL YVALTRA Sbjct: 609 VHSSKGKEADYVILVGLSEGKYGFPAKQNHNLIFDAFLPPQDDYLFAEERRLFYVALTRA 668 Query: 654 RHRVWALFNKENPSPFVEILKNLDVPVA 681 + V+ + S FV L N +A Sbjct: 669 KKHVYLIIPSSGISEFVLELINNQYDIA 696 >UniRef50_Q3IIK2 Putative helicase IV n=1 Tax=Pseudoalteromonas haloplanktis TAC125 RepID=Q3IIK2_PSEHT Length = 731 Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats. Identities = 190/724 (26%), Positives = 326/724 (45%), Gaps = 57/724 (7%) Query: 5 ATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLAIHCKRGLVWGELEFVLPDE 64 + LG+ + + I+ + + + + + ++ L + Sbjct: 8 PSWLGRFFTRIKLLSIEQESLVIEFKNATKQSFLIKDFNDFSQLQNRIFSAQINLTLGEN 67 Query: 65 KV-VRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENKWLTRE 123 + + + ++ ++ + A +L++ T +++L Sbjct: 68 SAHTTISFLNKAQAKALNIAINQYFSQALEHKINNAKALLKR--------TALDEYLRDS 119 Query: 124 QTSGVQQQIRQALSALPLPVNRLEE-FDNCREAWRKCQAWLKDIESARLQHNQAYTEAML 182 T+ + ++ N + + + A K+ A Q Y L Sbjct: 120 NTTILSAEVFSLSKRYQQNHNVWQGYLPSNSSQFLSVLASAKNKNDAIAQLRNKYERKQL 179 Query: 183 TEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPE 242 + ADF+ VES+PL Q AV+ LVLA AG+GKTSV+VA+ L+A +A PE Sbjct: 180 AQRADFYNNVESNPLTNEQRLAVIRNNDKNLVLAAAGTGKTSVMVAKTLDLIATKQAMPE 239 Query: 243 QILLLAFGRKAAEEMDERIRER-----LHTEDITARTFHALALHIIQQGSKKVPIVSKLE 297 QIL+LA+ + AA+E+ R +R L ++ TFHAL L ++QQ K I Sbjct: 240 QILVLAYNKTAAQELKTRFIKRAQQAKLSSKSPEVLTFHALGLQLLQQAGKGCNISP-FV 298 Query: 298 NDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRL----- 352 +D A + +Q + + L + + + ++ ++ L Sbjct: 299 SDFGALSSWLTSWLSEQVQAQPVLLSAFIAMLDKPLVSCDTHKSKFNATQVLAILKDSGQ 358 Query: 353 ----------------------------ASRLDRWVSLMRMHGGAQAEMIASAPEEIRDL 384 R + ++ +++ ++ ++ + Sbjct: 359 LKHEVDKYLKCLAAIRAEQLTDSEITQRLKRQNNQLNTVQLSTNQLNTSQVNSNQKSTNH 418 Query: 385 FSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISP 444 S +L+ + +A+K L A+N +DF +I QA + K + PW+HILVDEFQDIS Sbjct: 419 HSAAAQLLIAMHRAYKTQLIAQNCIDFDDMILQATQAVNKQQVNVPWQHILVDEFQDISA 478 Query: 445 QRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRF 504 R ALL +L K + AVGDDWQ+IYRFSG ++LTT F+E G L T+R+ Sbjct: 479 ARMALLNSLIKHGHKVRFTAVGDDWQSIYRFSGGNLALTTRFNELVGSHSLTLLQKTFRY 538 Query: 505 NSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLS--------GY 556 N+ I +VA RF+ QNP Q KK + + T + V LLD+ +L Sbjct: 539 NNSISDVAGRFVMQNPEQYKKLIITHTQVAEPQVILLDDVYQGKKSLELKTQQTINTIQK 598 Query: 557 AKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDG 616 I +L+RY + + A++ + F+T+H++KG +ADY II+GL++G G Sbjct: 599 HHANASIAVLSRYRYTLNKVQQHLASQQKSANVAFLTLHSAKGLEADYCIIIGLEQGKFG 658 Query: 617 FPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFVEILKNL 676 FP++ + + + EALLP + F +EERRL+YV LTRA+H+ + + + + PS FV+ L N Sbjct: 659 FPSSQQNNPLLEALLPSQDTFAYSEERRLLYVGLTRAKHKAYLIADAKQPSLFVKELIND 718 Query: 677 DVPV 680 + P+ Sbjct: 719 NYPI 722 >UniRef50_A6FAM2 Hypothetical helicase IV n=1 Tax=Moritella sp. PE36 RepID=A6FAM2_9GAMM Length = 730 Score = 447 bits (1151), Expect = e-124, Method: Composition-based stats. Identities = 210/733 (28%), Positives = 328/733 (44%), Gaps = 66/733 (9%) Query: 2 ELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLAIHCK----RGLVWGEL 57 + +T + L + G + + I + RG + L Sbjct: 8 DYSFSTFAQLLGAN-CRTLSFRPEGAVFT--TKQQQIYHYTWATFEPRLKHYRGSFFDTL 64 Query: 58 EFVLPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGEN 117 V + + VRL+G E L + L Q ++ Sbjct: 65 -VVSWENQRVRLNGIAKAEVAGLIDDLYFYALTGKEADILELYQQLTQVIE--------R 115 Query: 118 KWLTREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAY 177 ++ + +Q Q+ L + + + + + W + ++NQA Sbjct: 116 GYIPYSKWIFLQTQLAPWADWLEILPKINKVPAALKLPLARLRFWQQSQVENLDKYNQAV 175 Query: 178 TEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARG 237 Y F +E PL Q A + + LVLAGAG GKTSV++ R +LL Sbjct: 176 MNKHKERYKSLFDGLERHPLTEQQRDACIVANDANLVLAGAGCGKTSVMLGRCAYLLESQ 235 Query: 238 EASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLE 297 +A+ + IL+LAF + AA+EM R+ ERL IT +TFHALAL II+Q + P VSKL Sbjct: 236 QATADSILILAFAKDAAQEMKTRLAERLPNAKITVKTFHALALDIIKQVDNERPKVSKLA 295 Query: 298 NDTAARHELF----------IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEK 347 + +A+ + F K+ +K+ + +E V D+K Sbjct: 296 SSDSAKQQFFKQIISTRLLDKKLLEKELLDKELLDTNFNNLFSEYCYAYVAWLGKLPDDK 355 Query: 348 L-------------QRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAP 394 ++L +L L + ++E +A + D + +++ Sbjct: 356 HDAEVKRLLAGKGGYKKLLGQLVELTMLYKNTLTVKSEQKLNALPD-TDFAALTHEIVEI 414 Query: 395 LLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALR 454 LL ++ L N +DF +I +A + G+F SPW HILVDEFQDIS RA L+ L+ Sbjct: 415 LLTHYQHELDESNEIDFDEMIIKASDYVRNGQFSSPWLHILVDEFQDISQARATLVRHLQ 474 Query: 455 KQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANR 514 Q+ + LF VGDDWQAIY+F+G+ +++TT F + FG L+TT+RFN +I VA++ Sbjct: 475 TQHDDSKLFCVGDDWQAIYQFAGSDIAVTTRFSDYFGITSTLPLNTTFRFNDQISAVASK 534 Query: 515 FIQQNPGQLKKPLNSLTNGDKKAVTLLDES------------------------QLDALL 550 F+ N Q+ K + + T K + + QL A Sbjct: 535 FVMANSEQMHKQITTHTKAKKACIQVSYYQLGNDHKSSNKQDDAATLLLEKKLTQLAAAN 594 Query: 551 DKLSGYAKPEERILILARYHHMRPA--SLEKAATRWPKLQIDFMTIHASKGQQADYVIIV 608 +S ++ +L+LAR++ P +L +T++P+L I MT+H+SKGQ+AD VI++ Sbjct: 595 KGVSKGEGQQKSVLLLARFNFQLPDSKTLTALSTQYPQLDIKSMTVHSSKGQEADNVIVL 654 Query: 609 GLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSP 668 ++ G GFP R L P PDAEERRL YVALTRAR +V+ L NK+ PS Sbjct: 655 AMEAGEHGFPCHKRRHPFSLILQPEPTGVPDAEERRLFYVALTRARQQVYLLCNKDKPSA 714 Query: 669 FVEILKNLDVPVA 681 F+E L D + Sbjct: 715 FIEELVAGDYAIT 727 >UniRef50_B8I5U1 ATP-dependent DNA helicase PcrA n=14 Tax=Firmicutes RepID=B8I5U1_CLOCE Length = 785 Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats. Identities = 102/411 (24%), Positives = 168/411 (40%), Gaps = 51/411 (12%) Query: 193 ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 + LN Q AV++ E LL+LAGAGSGKT VL R +L+ + P IL + F K Sbjct: 3 LLNGLNKEQKEAVLHNEGPLLILAGAGSGKTRVLTHRIAYLIEQHGIYPSNILAITFTNK 62 Query: 253 AAEEMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 AA EM ERI + D+ TFH++ + I+++ +K+ ++ I E Sbjct: 63 AAREMKERIAGLIGDLSNDMWVGTFHSICIRILRRDIEKLGYDRSFVIYDTQDQQVVIKE 122 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 K+ S + S++ G + Sbjct: 123 CIKELSINEKNFPP-----------------------------------KSVLETIGKQK 147 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR---- 426 E+I + E R+ +A + K ++ LKA NA+DF +I I + +K Sbjct: 148 DELIDAVHYEKLYASDFRMGKIAKIYKLYEKKLKANNALDFDDIIMNTIKLFDKYPEVLD 207 Query: 427 -FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 + +++ILVDE+QD + + L+ L + Q L VGDD Q+IY + GA + Sbjct: 208 YYQRRFRYILVDEYQDTNTAQYTLVRKLSEA--QENLCVVGDDDQSIYGWRGANIRNILD 265 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQ 545 F ++F + L+ YR I + AN I N G+ K L + G K V ++++ Sbjct: 266 FEKDFKKCCTIKLEQNYRSTQNILDAANHVIGNNTGRKCKSLWTDNKGGSKIVICENDNE 325 Query: 546 LDALL-------DKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + L + + + +L R + E +I Sbjct: 326 HEEALYAAREIQRLIFDEDRKYKDFAVLYRINAQSRVLEEMFMREGIPYKI 376 Score = 128 bits (321), Expect = 8e-28, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 58/187 (31%), Gaps = 36/187 (19%) Query: 519 NPGQLKKPLNSLTNGDKKAV------TLLDESQLDALLDKLSGYAKPEERILILARYHHM 572 N + K +++ V + ++ + + + + Sbjct: 465 NKFRTMKEHMTISQMLDMVVEDSGILREYELENTVEAQSRIENIKELKSVAIEFEKQSED 524 Query: 573 RPASLEKAAT---------RWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARE 623 A + + + MT+H++KG + V I G++EG A E Sbjct: 525 NSLEEFLAHISLVSDIDSLQEDQDYVVLMTMHSAKGLEFPVVFIPGMEEGVFPGYRAITE 584 Query: 624 SIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWAL----------FNKENPSPFVEIL 673 EERRL YV +TRAR +++ + PS F+ + Sbjct: 585 GP-----------EQLEEERRLCYVGITRAREKLYLSNARFRTLFGNSSYNRPSRFLAEI 633 Query: 674 KNLDVPV 680 V Sbjct: 634 PEELVEY 640 >UniRef50_D2R9Y0 Putative ATP-dependent DNA helicase PcrA n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2R9Y0_GARVA Length = 1023 Score = 444 bits (1141), Expect = e-123, Method: Composition-based stats. Identities = 103/590 (17%), Positives = 205/590 (34%), Gaps = 85/590 (14%) Query: 111 ATRTGENKWLTREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESAR 170 + ++ + +++ Q+ + +P + ++ A + + Sbjct: 65 EPDFTQQEYASDQESVPPQESV---PPQESVPPQESVPSQESVPSQQEALAQQELLPQES 121 Query: 171 LQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARA 230 +++Q + + + A Q LNP Q++AV +LL+ AGAGSGKT VL R Sbjct: 122 QEYSQNFAHSRVAVDA----QKLLDGLNPQQSQAVQYDGPALLIGAGAGSGKTRVLTRRI 177 Query: 231 GWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTED--ITARTFHALALHIIQQGSK 288 W+L++ A P QIL + F KAA EM ER+ + + +E + TFH+ + I+++ + Sbjct: 178 AWILSQKGAWPSQILAITFTNKAAAEMRERLSKLIGSEANTMWVSTFHSACVKILRRSGQ 237 Query: 289 KVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKL 348 + + S + E + + + + + + Sbjct: 238 YIGLKSGFSIYDTSDCERLVKIIATELNVDIKR---------------------FTPRSI 276 Query: 349 QRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENA 408 +++ + ++ + + + A + ++ L NA Sbjct: 277 LGKISDCKNSLITWREQLDMYANDYKPGVAGQQIAHAGNSEAVYATIYAEYQHRLSQANA 336 Query: 409 VDFSGLIHQAIVILEKGR-----FISPWKHILVDEFQDISPQRAALLAALRK-------- 455 VDF LI + + ++ + + +++ILVDE+QD + + L+ L Sbjct: 337 VDFDDLIMRTVQLMREVPEAAQYYRHKFRYILVDEYQDTNHAQYELIRELAGVDVKQNSA 396 Query: 456 -----QNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGE 510 N+ ++ VGD Q+IY F GA + F ++F L+ YR I + Sbjct: 397 NPSQQNNTPASITVVGDSDQSIYAFRGADIRNIQDFEKDFPNATTIMLEQNYRSTQTILD 456 Query: 511 VANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDE-------SQLDALLDKLSGYAKPEERI 563 AN I N G+ K L + + + + Sbjct: 457 AANAVISHNQGRKPKKLWTALGKGTPITGYAADSAQQEAAWVAQEIARLAGEEGVAYSDM 516 Query: 564 LILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARE 623 I+ R + + + Q+ T K + V Sbjct: 517 AIMYRANAQSRSLEDALVKAGLPYQLVGGT----KFYERREV---------------KDA 557 Query: 624 SIMEEALLPPVEDFPDAEERRLMYV------ALTRARHRVWALFNKENPS 667 +++ P +D RR++ V A RA + + S Sbjct: 558 LAYLQSMANPDDDVNM---RRILNVPKRGLGA--RAEALLTLYAQTQGVS 602 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 61/178 (34%), Gaps = 25/178 (14%) Query: 516 IQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPA 575 I + G L+ S D V D + P+ + + Sbjct: 652 ILNDSGLLEDLQRSEDPQDAARV---DNLSQLQSVAAEYEQNTPDASVAGFLETTALVAD 708 Query: 576 SLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVE 635 S + ++ MT+H +KG + V + G+++G+ A + Sbjct: 709 SDQLPDENEDTGKVTLMTLHTAKGLEYPVVFLTGMEQGTFPHSRALEDD----------- 757 Query: 636 DFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVARK 683 EERRL YV +TRA+ R++ PS F++ + + + R+ Sbjct: 758 -GELCEERRLAYVGITRAKQRLYVTRAAVRAQWGQAQDMLPSQFLDEIPDNLIDWKRR 814 >UniRef50_A8MLJ7 ATP-dependent DNA helicase PcrA n=3 Tax=Firmicutes RepID=A8MLJ7_ALKOO Length = 739 Score = 440 bits (1133), Expect = e-122, Method: Composition-based stats. Identities = 100/418 (23%), Positives = 168/418 (40%), Gaps = 51/418 (12%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 ++ LNP Q AV+ E +LVLAGAGSGKT VL R +L+ SP IL + F Sbjct: 15 KESRYHTLNPMQKNAVLTTEGPVLVLAGAGSGKTRVLTHRIAYLVEEKGVSPYHILAITF 74 Query: 250 GRKAAEEMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 KAA+EM ER+ L D+ TFH+ + I++ K+ ++ Sbjct: 75 TNKAAKEMKERVEALLGDYHRDLWVSTFHSSCVRILRMEIDKLGYEKNFVIYDTTDQQVL 134 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 + + K+ + + + R + + + R L+ Sbjct: 135 MKDCLKKFNLDEKLFQ-------------------------PRMILNEIGRAKDLLIGPN 169 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR- 426 E R + +A + + ++ +K+ NA+DF LI + + + + Sbjct: 170 EYLEEFGN----------DFRNQKIAEIYRLYQDRMKSNNALDFDDLIMKTVQLFQTHPT 219 Query: 427 ----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + + +K+ILVDEFQD + + L++ L K + L VGDD Q+IY + GA + Sbjct: 220 VLRYYQNKFKYILVDEFQDTNMAQYTLISLLAKSHG--NLCVVGDDDQSIYGWRGADIRN 277 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD 542 F ++F + L+ YR I + AN + N + K L + + Sbjct: 278 ILGFEKDFPNTQVVKLEQNYRSTKSILDAANMVVANNTDRKSKKLWTDNQDGEIIQYYRA 337 Query: 543 ESQLDA------LLDKL-SGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 ++ D ++KL +P IL R + A E R +I T Sbjct: 338 NNEYDEASFISGTIEKLNEEENRPYSEFAILYRTNAQSRALEEMLMKRAIPYKIYSGT 395 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 61/192 (31%), Gaps = 35/192 (18%) Query: 514 RFIQQNPGQLKKPLNSLTNGDKKAVT-LLDESQLDALLDKLSGYAKPEERILILARYHHM 572 IQ + + + + T +D + ++ S +E + + + Sbjct: 478 ELIQSLRDRQDEMSVTDIVKEIYEKTGYIDALMAEDKIEAESRIENLQEFLSVTKDFDEN 537 Query: 573 RPAS-----------LEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAA 621 + + MT+H++KG + V I G++E + Sbjct: 538 SEVKTLEEFLARTSLETTLDENDEENTVTLMTLHSAKGLEFPVVFIPGMEESIFPSAMSL 597 Query: 622 RESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVE 671 +E+ EERRL YV +TRAR +++ S F+ Sbjct: 598 QENN-------------LEEERRLCYVGITRAREKLYMSHAMTRTLYGRTNANPISRFLG 644 Query: 672 ILKNLDVPVARK 683 + + + R Sbjct: 645 EIPEELIQIDRP 656 >UniRef50_A9KP66 UvrD/REP helicase n=12 Tax=Bacteria RepID=A9KP66_CLOPH Length = 807 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 98/416 (23%), Positives = 159/416 (38%), Gaps = 54/416 (12%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNP Q RAV + +L+LAGAGSGKT VL R +L+ +P QI+ L F KAA+ Sbjct: 6 SLNPEQRRAVEHDRGPMLILAGAGSGKTRVLTHRIAYLIEERNVNPYQIMALTFTNKAAK 65 Query: 256 EMDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM ER+ + + E+I TFH+ + I+++ + + + I E K Sbjct: 66 EMRERVDKIVGYGAENIWVSTFHSTCVRILRRFIETLGYDRNFTIYDTDDQKTLIREVLK 125 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 Q K +R S + E Sbjct: 126 FLQIDTKQTK-------------------------ERVFLSAISSAK----------DEG 150 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRFI 428 I+ E+ L ++ + K ++ LK NA+DF LI + + + + + Sbjct: 151 ISPEEFELSALGDYNKMKISNVYKEYQRRLKTNNALDFDDLIMKTVELFQSNTEALNYYR 210 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNS-----QTTLFAVGDDWQAIYRFSGAQMSLT 483 + +++I+VDE+QD + + L+ L + + L VGDD Q+IY+F GA + Sbjct: 211 NRFRYIMVDEYQDTNTIQFKLIRLLAHSLNEYNEVEHNLCVVGDDDQSIYKFRGANIRNI 270 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDE 543 F + F + L+ YR I AN I N G+ K L + ++ + Sbjct: 271 LDFEKEFPDAVVIKLEQNYRSTKNILNAANEVIHNNLGRKDKSLWTDNEDGEQVSFCQYD 330 Query: 544 SQLDALLDKLSGY-------AKPEERILILARYHHMRPASLEKAATRWPKLQIDFM 592 + + IL R + EK R +I Sbjct: 331 TDFAEATQVVDSIKTLNDQDGISFNNFAILYRTNAQSRVFEEKMIQRSVPYKIIGS 386 Score = 97.7 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 30/207 (14%), Positives = 66/207 (31%), Gaps = 36/207 (17%) Query: 503 RFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAV------TLLDESQLDALLDKLSGY 556 R S+I FI+ +L +L + ++ + L+E+ ++ D++ Sbjct: 459 RSTSKITSFV-SFIETIKSKLSSDTFTLKDLMEEILEGTGYLKELEEADDESAEDRIGNI 517 Query: 557 AKPEERILILARYHHMRPASLEKAAT----------RWPKLQIDFMTIHASKGQQADYVI 606 + +I+ P + MT+H++KG + YV Sbjct: 518 NELINKIVTYEVEATEPPTLSGFLEEVALVADIDSLEEDSNHVVLMTLHSAKGLEFPYVY 577 Query: 607 IVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNK--- 663 + G+++G + E + YV +TRA ++ + Sbjct: 578 LCGMEDGIFPSYMSINAENPELEIEEERRL---------CYVGITRAMKQIHLSAARQRM 628 Query: 664 -------ENPSPFVEILKNLDVPVARK 683 PS F+ + + + Sbjct: 629 MRGETQFNRPSRFINEIPRYLLTIQSA 655 >UniRef50_C7N6W8 DNA/RNA helicase, superfamily I n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N6W8_SLAHD Length = 772 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 83/415 (20%), Positives = 155/415 (37%), Gaps = 51/415 (12%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 ++ LN Q AV+ E LLVLAGAGSGKT VL R ++ P QI+ + F Sbjct: 2 LDIDSLNEPQREAVLCTEGPLLVLAGAGSGKTRVLTYRIAHMVQDLNVPPWQIMAITFTN 61 Query: 252 KAAEEMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIA 309 KAA EM ER+ + + TFH++ + I++ + + + + Sbjct: 62 KAANEMRERLGRLVGPSARGMWVSTFHSMCVRILRVDCELLGFSKSFTIYDDDDTKRLLK 121 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 + + ++ + + ++ G Sbjct: 122 DVMAGLDLDP-------------------------KRWPVNSIRGKISQAKNELKAPGVY 156 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR--- 426 E K+ A + ++ LK NA DF L+ ++ + Sbjct: 157 ADEARDPVS-----------KVTARVYAVYQERLKMANAFDFDDLLMYTYLLFKNHPDVL 205 Query: 427 --FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 + ++++LVDE+QD + + A+ L ++ + VGDD Q+IY + GA + Sbjct: 206 EAYQDRFRYLLVDEYQDTNHAQYAITKLLAAKH--QNIMVVGDDDQSIYSWRGADIRNIL 263 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDES 544 F +++ + L+ YR + I AN + N + +K L + + +K + + Sbjct: 264 EFEQDYPQARSIKLEQNYRSSGNILNAANAVVAHNTKRKQKRLFTESGDGEKILVYMASD 323 Query: 545 QLDA------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 + D +DKL E + + R + + + +I T Sbjct: 324 ERDEGRWIAGEIDKLHNEGVSYEEMAVFYRTNAQSRSLEDMLLRAGVPYRIVGGT 378 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 66/187 (35%), Gaps = 30/187 (16%) Query: 513 NRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHM 572 ++ IQ + S K+ ++++DE +D+ + + + + Sbjct: 484 SQLIQALEQERTDEAESRIENIKEFLSVVDEYVESHEIDESALPPEGINLLADTRQLSPD 543 Query: 573 RPASLEKA--------ATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARES 624 + A + MT+H+SKG + D V + G++E ++R Sbjct: 544 SLEDFLEWVRLRTDLDAATDDDQFVTLMTVHSSKGLEFDCVFVAGMEETLFPHSNSSR-- 601 Query: 625 IMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILK 674 + EERRL YVA+TRAR R++ S FV + Sbjct: 602 ----------DPQGLEEERRLAYVAITRARKRLYLTCAYARQIFGETHANPVSRFVGEIP 651 Query: 675 NLDVPVA 681 + A Sbjct: 652 SELRKSA 658 >UniRef50_C9XK50 ATP-dependent DNA helicase n=5 Tax=Clostridium RepID=C9XK50_CLODC Length = 762 Score = 430 bits (1107), Expect = e-119, Method: Composition-based stats. Identities = 91/418 (21%), Positives = 161/418 (38%), Gaps = 51/418 (12%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 R + LNPAQ AV E +L+LAGAGSGKT VL R +L+ IL + F Sbjct: 7 RNMNLDTLNPAQREAVEKTEGPVLILAGAGSGKTKVLTTRIAYLIEDKGVQAPNILAITF 66 Query: 250 GRKAAEEMDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 KAA EM ER+ + + E D+ TFH+ + I+++ K+ +A Sbjct: 67 TNKAANEMRERVEQNIGPETKDMWISTFHSCCVRILRKDINKIGYNRSFVIYDSADQVTL 126 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 + + K+ N D + + S + + Sbjct: 127 VKDCLKEL-------------------------NLSDKVFEPKAVISAISGAKDKLYTPK 161 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-- 425 + ++ R+ +A + ++ LK +A+DF LI + + + + Sbjct: 162 QFKD----------INMADNRMVKIADIYALYQDRLKRNSALDFDDLILKTVELFKANDE 211 Query: 426 ---RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + S +++I+VDE+QD S + L+ L +++ + VGDD Q+IY + GA + Sbjct: 212 VLAYYRSRFRYIMVDEYQDTSKAQYELIKLLAREH--QNICVVGDDDQSIYGWRGADIRN 269 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAV---- 538 F +++ L+ YR I + AN+ I N + +K L S + Sbjct: 270 ILEFEKDYDNVHVVKLEQNYRSTQVILDAANKVISNNIERKRKKLWSEKKEGELIKIQLT 329 Query: 539 ---TLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 + D++ +P + +L R + + I T Sbjct: 330 GSEIEEADFIADSIAQIARKENRPYKDFAVLYRANAQARPVEDALNRSQIPYNIYGGT 387 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 20/109 (18%) Query: 581 ATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDA 640 ++ MTIH SKG + V + G++EG A + + D Sbjct: 563 NDEEDNDRVSLMTIHTSKGLEFPVVFLTGMEEGLFPISRA----------IKSMSDSQIE 612 Query: 641 EERRLMYVALTRARHRVWALFNKENP----------SPFVEILKNLDVP 679 EERRL YV +TRA+ ++ ++ S F+E L + Sbjct: 613 EERRLCYVGITRAKEELYMSLTEKRTLYGKTNVAIASRFMEELPEECIE 661 >UniRef50_C4Z8S4 ATP-dependent DNA helicase PcrA n=17 Tax=Firmicutes RepID=C4Z8S4_EUBR3 Length = 763 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 93/412 (22%), Positives = 161/412 (39%), Gaps = 51/412 (12%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 + LN Q AV+ E LL+LAGAGSGKT VL R +L+ +P I+ + F Sbjct: 1 MNLDMLNEQQREAVLTTEGPLLILAGAGSGKTRVLTYRTAYLIDECGVNPYNIMAITFTN 60 Query: 252 KAAEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIA 309 KAA EM ERI + + +E I TFH+ + I+++ ++ + A + + Sbjct: 61 KAAGEMRERIDDMVGYGSESIWVSTFHSTCVRILRRYIDRLGYDTNFTIYDADDQKALMK 120 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 + K+ K ++ + + Sbjct: 121 DICKRLEIDTKMYK-------------------------EKMFLNVISSAK--------- 146 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR--- 426 EMI E R + A + K ++ ALK NA+DF L+ + + + + + Sbjct: 147 -DEMIDPIEFENRFTGDFVKRKQALVYKEYQNALKQNNALDFDDLLVKTVELFKLDKEVL 205 Query: 427 --FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 + +++I+VDE+QD + + L+ L + L VGDD Q+IY+F GA + Sbjct: 206 DYYQERFRYIMVDEYQDTNTVQFELIRLLAMKYK--NLCVVGDDDQSIYKFRGANIYNIL 263 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL--- 541 F ++F + + L+ YR I + AN I N G+ K L + + Sbjct: 264 NFEKHFEDAKVIKLEQNYRSTQNILDAANSVISNNVGRKDKRLWTDNGAGDRITFEQLES 323 Query: 542 ----DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + ++ + + +L R + EK +I Sbjct: 324 GFEEADYVARSIARLVRKGEARYKDCAVLYRTNAQSRLFEEKFIAANIPYKI 375 Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 50/149 (33%), Gaps = 22/149 (14%) Query: 542 DESQLDALLDKLSGYAKPEERIL---ILARYHHMRPASLEKAATRWPKLQIDFMTIHASK 598 + Q +D+L A E+ L+ + + + MT+H++K Sbjct: 499 EAEQRIENIDELINKAVDYEQGEENPTLSGFLEEVALVADIDGLDENSDYVVLMTLHSAK 558 Query: 599 GQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVW 658 G + V + G+++G + EERRL YV +TRA+ + Sbjct: 559 GLEFPNVYLAGMEDGLFPSYMSITSDDA---------TSEIEEERRLAYVGITRAKEHLT 609 Query: 659 ALFNKEN----------PSPFVEILKNLD 677 + S FV+ + Sbjct: 610 ITSARMRMVRGETQFNKVSRFVKEIPREL 638 >UniRef50_C2KR35 ATP-dependent DNA helicase n=3 Tax=Mobiluncus RepID=C2KR35_9ACTO Length = 900 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 108/488 (22%), Positives = 176/488 (36%), Gaps = 69/488 (14%) Query: 132 IRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEAMLTEYADFFRQ 191 + SAL L +R N L + N T L + + Sbjct: 1 MNDLFSALSLSGSRGASIPNSAA--------LPGSSTHEPPLNPTETAPNLETWREERIT 52 Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 + LNPAQ +AV + +LLV+AGAGSGKT VL R WLLA G P +IL + F Sbjct: 53 AITKGLNPAQYQAVTHPGGALLVMAGAGSGKTRVLTRRIAWLLATGRVRPWEILAITFTN 112 Query: 252 KAAEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIA 309 KAA EM ER+ + + + TFH+ + I++ ++ + I A + + Sbjct: 113 KAAGEMRERVETLVGNAAKYMWVSTFHSSCVRILRAEAETLGITRSFSIYDTADTKALLT 172 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 K + + A+R+ + + Sbjct: 173 RIIKGRGLDPKRF-------------------------TPKSFAARISNAKNELVEPATF 207 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR--- 426 K +L A + ++ L+ NA DF LI + + + + Sbjct: 208 AEMAAP----------DKISQLTAEIYAEYQQLLRRANAFDFDDLIAEVVYLWRRHPEIL 257 Query: 427 --FISPWKHILVDEFQDISPQRAALLAALR-------------KQNSQTTLFAVGDDWQA 471 + ++++LVDE+QD +P + L+ L + L VGD Q+ Sbjct: 258 AKYRDKFRYVLVDEYQDTNPAQYQLVRLLARDPLGDPRLDGALGAHPGAGLTVVGDSDQS 317 Query: 472 IYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLT 531 IY F GA + F ++F L+ YR I VAN I +N G+ KK L + Sbjct: 318 IYAFRGATIRNIEEFEQDFPGATTVYLEQNYRSTGTILSVANAIISENSGRHKKNLWTEA 377 Query: 532 NGDKKAVTLLDESQLDALLDKLSGY------AKPEERILILARYHHMRPASLEKAATRWP 585 KA+ +++ D + P + + R + A E Sbjct: 378 GDGPKAIMFAADTERDEAAFIIREIRDAHTAGTPWDEFAVFYRTNSQSRALEEMLTRENV 437 Query: 586 KLQIDFMT 593 ++ T Sbjct: 438 PYRVVGGT 445 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 45/125 (36%), Gaps = 22/125 (17%) Query: 568 RYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIME 627 + + K ++ MT+H +KG + + V + G+++G + Sbjct: 633 ETNVSEASGDHPNPAPETKPEVTLMTVHTAKGLEFNTVFVTGMEDGLFPHSRSLD----- 687 Query: 628 EALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENP----------SPFVEILKNLD 677 + EERRL YVA+TRAR +++ S F+ + Sbjct: 688 -------DPEAIEEERRLAYVAVTRARRQLYLTRAAARTVFGDTMNMPASRFLNDIPAQY 740 Query: 678 VPVAR 682 V R Sbjct: 741 VDNRR 745 >UniRef50_C6D4S8 ATP-dependent DNA helicase PcrA n=46 Tax=Firmicutes RepID=C6D4S8_PAESJ Length = 785 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 90/408 (22%), Positives = 162/408 (39%), Gaps = 51/408 (12%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 LNP Q AV + LL++AGAGSGKT VL R +L+ + +P IL + F KAA Sbjct: 12 QKLNPPQRDAVQATDGPLLIMAGAGSGKTRVLTHRIAYLIEKKRVAPWSILAITFTNKAA 71 Query: 255 EEMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM R+ + +DI TFH++ + I+++ ++ S +A I Sbjct: 72 REMQARVAALIGPTGQDIWVSTFHSMCVRILRRDIDRIGFTSNFSILDSADQLSVIRNCM 131 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 K+ + + + + + + + + + + Sbjct: 132 KELNID-------------------------VKKFEPKAVQAEISGAKNELITPERYEQK 166 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----F 427 ++A + K ++ LK+ N++DF LI I + ++ + Sbjct: 167 -----------TGDYFTDIVAKVFKMYQKRLKSNNSLDFDDLIMTTIQLFKEMPEVLEFY 215 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + +++I VDE+QD + + L L ++ + VGD Q+IYR+ GA ++ F Sbjct: 216 QNKFRYIHVDEYQDTNRAQYMLCRMLADKHH--NICVVGDSDQSIYRWRGADITNILNFE 273 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLD 547 +++ E L+ YR ++ I E AN I+ N G+ K L + +S+ D Sbjct: 274 DDYPEARTIMLEQNYRSSANILEAANAVIKLNTGRKPKKLWTDQGEGDMITLYQADSEHD 333 Query: 548 A------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + K + + IL R + E QI Sbjct: 334 EGYFVTGTISKNVKSGRRYDDHAILYRTNAQSRVIEEILIKSDIPYQI 381 Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 25/188 (13%), Positives = 63/188 (33%), Gaps = 23/188 (12%) Query: 507 RIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILIL 566 + E+ + ++ + +++ + + + + +K + + L Sbjct: 480 SVTELTEKVLEMSQYRIELQREKTLESTARLENIDEFLSVTMDFEKRNEDKTLVAFLTDL 539 Query: 567 ARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIM 626 A + + + MT+H++KG + V I+G++E A ++ Sbjct: 540 ALIADIDSMDKDDDGKPADNNSVVLMTMHSAKGLEFPVVFIIGMEESIFPHSRALNDNEE 599 Query: 627 EEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNL 676 E YV +TRA +++ + PS F++ + + Sbjct: 600 LEEERRL------------AYVGITRAEKQLYLTCARSRTLFGRISANLPSRFLQEVPD- 646 Query: 677 DVPVARKP 684 +V P Sbjct: 647 NVKTLASP 654 >UniRef50_C4G2S8 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2S8_ABIDE Length = 768 Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats. Identities = 94/419 (22%), Positives = 159/419 (37%), Gaps = 54/419 (12%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 LNP Q +AVV+ LL+LAGAGSGKT VL R +L+ SP IL L F KA Sbjct: 4 LDNLNPEQKKAVVHENGPLLILAGAGSGKTRVLTRRIAYLIKEYGVSPWNILALTFTNKA 63 Query: 254 AEEMDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 A EM ER+ E + E+I TFH+ + ++++ K+ + + + Sbjct: 64 AREMRERVDELIEEGAENIWVSTFHSACVKMLRRFIDKIGYDRSFNIYDTDDTKAVVKQV 123 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 K + E ++ + + + Sbjct: 124 LKALNIDN-------------------------KEFPEKTCLNVISNAKN---------- 148 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR----- 426 + I + + F + A + ++ +K NA+DF ++ + + + + + Sbjct: 149 DFIDAEEFAVNSKFGVDNNVYARVYSEYEKRMKNNNALDFDDILVKTVELFQTDKDTLEY 208 Query: 427 FISPWKHILVDEFQDISPQRAALLAALR-----KQNSQTTLFAVGDDWQAIYRFSGAQMS 481 + +++ILVDE+QD + + LL L + L VGDD Q+IY+F GA + Sbjct: 209 YQRRFRYILVDEYQDTNIVQFKLLKLLANYVNEDGEIENNLCVVGDDDQSIYKFRGADIR 268 Query: 482 LTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL 541 F + + L+ YR I E AN I N + K L + G Sbjct: 269 NILNFEKIYPNALVIKLEENYRSTGNILEAANGVISNNKERKDKRLWTSKEGGASISYKT 328 Query: 542 DESQLDA-------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 ++ +L ++ I +L R + A EK ++ T Sbjct: 329 YDTGEREANGVANTVLRTVNEGKAKYSDIAVLYRTNAQSRAIEEKFIYSNIPYKLYGGT 387 Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 62/177 (35%), Gaps = 21/177 (11%) Query: 514 RFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMR 573 I++ + L + + + A+ + + A + LA Sbjct: 490 ALIEEIGYIEELKLEGTDEAQGRIENIEELINKVAIFELGNQDAGDIKLGNFLADVSLAT 549 Query: 574 PASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPP 633 A K + ++ MT+H++KG + V IVG++EG FP+ M+E+ L Sbjct: 550 DAD-NKDSENKDADKVTLMTLHSAKGLEFKIVFIVGMEEGL--FPSRMCLFAMDESELEE 606 Query: 634 VEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPV 680 YV +TRA +++ PS F+ + + V Sbjct: 607 ERRL--------CYVGITRAMEKLYLSNAASRMLRGDVQWNAPSRFIGEIPEHLLSV 655 >UniRef50_A8SUE8 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A8SUE8_9FIRM Length = 789 Score = 427 bits (1098), Expect = e-118, Method: Composition-based stats. Identities = 88/412 (21%), Positives = 164/412 (39%), Gaps = 50/412 (12%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + LN Q +A + + LL+LAGAGSGKT V+ R +L+ +P IL + F KAA Sbjct: 18 AGLNDMQQQACEHVDGPLLILAGAGSGKTRVITHRVAYLMDHEGVNPLNILAITFTNKAA 77 Query: 255 EEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM +R+ + + + TFH+L + I+++ + K+ + + + + Sbjct: 78 REMRDRVDLIVGEGADRVWVSTFHSLCVRILRRYADKIGYEKNFDIYDSDDQKSTVKSIL 137 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 K ++ S + + + Sbjct: 138 KDFQIDP-------------------------KRYPEKMFMSEISKAK----------EK 162 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----F 427 ++ R+ +A + ++G LK NA+DF LI++ + + E + Sbjct: 163 YMSPDEFARRNAADYAATKVAEVYTEYQGRLKKNNAMDFDDLIYKTVELFEHNPDVLDTY 222 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + +++I+VDE+QD + + ++ L ++ L VGDD Q+IY+F GA ++ F Sbjct: 223 QNRFRYIMVDEYQDTNHIQFLMVKMLARKYR--NLCVVGDDDQSIYKFRGANITNILNFE 280 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVT------LL 541 + + + + L+ YR I AN IQ N G+ K L + + +K Sbjct: 281 KEYEDAKVIKLEQNYRSCGNILAAANAVIQHNEGRKDKALWTDQDAGEKISFDQCDTEYA 340 Query: 542 DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 + + + + L I IL R + EK ++ T Sbjct: 341 EGDLVASRIKTLVRQGVGYRDIAILYRTNAQSRVLGEKMVYANIPYRVYGGT 392 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 61/172 (35%), Gaps = 37/172 (21%) Query: 513 NRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHM 572 + I ++ + L ++ K V +DE++ L + L A + Sbjct: 505 SELIAEHTEESMTRLENIDELRNKVVEFVDENEEAGLSEFLEEIALVSDL---------- 554 Query: 573 RPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLP 632 + Q+ MT+H++KG + YV I G+++ L Sbjct: 555 -------DSMSEDDNQVKLMTLHSAKGLEFPYVFICGMEDRVFPS----------GMALN 597 Query: 633 PVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILK 674 + EERRL YV +TRA +++ +E S F+ + Sbjct: 598 SDDPDALEEERRLCYVGITRAMKKLYLSAARERMMHGNRISSDVSRFIREIP 649 >UniRef50_A0Q2Q4 ATP-dependent DNA helicase PcrA, putative n=23 Tax=Clostridium RepID=A0Q2Q4_CLONN Length = 760 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 90/407 (22%), Positives = 162/407 (39%), Gaps = 51/407 (12%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q A E +LVLAGAGSGKT VL R ++ IL + F KAA E Sbjct: 7 LNKEQYEAATAIEGPVLVLAGAGSGKTRVLTYRIAHMIEDLGIPQYNILAITFTNKAAGE 66 Query: 257 MDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M +RI++ + + + + TFH+ + I+++ K+ + + + + K+ Sbjct: 67 MKDRIKKLVSNNIDSMWVSTFHSSCVRILRREIDKLGYNKNFAIYDSTDQKNLVKQCMKE 126 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 N D + ++ + S++ + + + Sbjct: 127 L-------------------------NISDKDINEKEIISKIGKQKDNLITAEEYKK--- 158 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FIS 429 R+ R +A + ++ LK NA+DF LI + + + +K + + Sbjct: 159 -------RNEKDFRKNRIADVYLLYQKKLKNSNALDFDDLIFKTVELFKKHPEVLEFYQN 211 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 +K+I+VDE+QD + + L+ L + +F VGDD Q IY++ GA + F ++ Sbjct: 212 KFKYIMVDEYQDTNKTQYQLVKMLAAAHR--NIFVVGDDDQCIYQWRGADIKNILDFEKD 269 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDAL 549 + E + L+ YR + I AN I+ N + K L + +K S +D Sbjct: 270 YPEAKVVKLEENYRSKANILNAANTVIKHNSQRKNKVLRTQNENGEKIKIYRAYSDMDEG 329 Query: 550 L-------DKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 L + + + IL R + + R +I Sbjct: 330 LFISNEIKRLIKKENRSYKDFAILYRTNAQSRVFEDVFMKRDIPYRI 376 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 36/235 (15%), Positives = 62/235 (26%), Gaps = 43/235 (18%) Query: 478 AQMSLTTAFHENFGEGE-RCDLD-TTY-----RFNSRIGEVANRFIQQNPGQLKK----P 526 A +S F E LD R S I + I K Sbjct: 421 ATVSKIQDFANYMDECMYSVLLDVENIPGLSKRSISSINKFT-SLINGFTRTKDKVSVSN 479 Query: 527 LNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPAS---------L 577 L + L +S + ++ + + + S Sbjct: 480 LIQEILESTGYMKELKDSNEIEDISRIENIKELVSAAVEFENTSEDKSLSAFLEKITLVS 539 Query: 578 EKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDF 637 + MT+H++KG + V +VG++ G Sbjct: 540 DVDNYDEDTDTTVMMTLHSAKGLEFPVVFMVGMENGIFP------------GAQSLENFA 587 Query: 638 PDAEERRLMYVALTRARHRVWALFNKENP----------SPFVEILKNLDVPVAR 682 E RRL YV +TRA+ +++ S F+ + + R Sbjct: 588 EMEESRRLCYVGITRAKEQLYMTSASTRKVFGRSVAYSESDFINEISPNLKEMVR 642 >UniRef50_Q8CRT9 ATP-dependent DNA helicase pcrA n=245 Tax=cellular organisms RepID=PCRA_STAES Length = 729 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 94/408 (23%), Positives = 155/408 (37%), Gaps = 51/408 (12%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 +N Q+ AV E LL++AGAGSGKT VL R +LL + SP IL + F KAA Sbjct: 6 KNMNSEQSEAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNILAITFTNKAA 65 Query: 255 EEMDERIRERLHTED--ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 +EM R+ + E I TFH++ + I+++ + ++ I + I + Sbjct: 66 KEMKARVEHLVGEEAQVIWMSTFHSMCVRILRRDADRIGIERNFTIIDPTDQKSVIKDVL 125 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 K N R + + ++ AQ E Sbjct: 126 K-------------------------SENIDSKRFEPRMFIGAISNLKNELKTPEDAQKE 160 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----F 427 +++A + K ++ L A+DF LI I + E+ + Sbjct: 161 A-----------NDFHSQMVATVYKGYQRQLSRNEALDFDDLIMTTINLFERVPETLEYY 209 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + +++I VDE+QD + + L+ L N L VGD Q+IY + GA + +F Sbjct: 210 QNKFQYIHVDEYQDTNKAQYTLVKLLA--NKFKNLCVVGDSDQSIYGWRGADIQNILSFE 267 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL------L 541 E++ E + L+ YR I AN I+ N + K L + +G K Sbjct: 268 EDYPEAKTIFLEQNYRSTKNILNAANEVIKHNSERKPKGLWTANSGGDKIQYYEAMTERD 327 Query: 542 DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + + + K K + IL R + E + Sbjct: 328 EAEYVVKEIMKHQRSGKKYSEMAILYRTNAQSRVLEETFMKSNIPYTM 375 Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 43/106 (40%), Gaps = 20/106 (18%) Query: 584 WPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEER 643 + + MT+H++KG + V I+G++E A + +D EER Sbjct: 545 DTQNGVTLMTMHSAKGLEFPIVFIMGMEESLFPHIRAIKSE----------DDHEMEEER 594 Query: 644 RLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVP 679 R+ YVA+TRA ++ PS F++ + + Sbjct: 595 RICYVAITRAEELLYITNATTRMLFGRSQSNMPSRFLKEIPEDLLD 640 >UniRef50_C7MP63 DNA/RNA helicase, superfamily I n=6 Tax=Coriobacteriaceae RepID=C7MP63_CRYCD Length = 841 Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats. Identities = 82/416 (19%), Positives = 150/416 (36%), Gaps = 51/416 (12%) Query: 191 QVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFG 250 ++ LNP Q AV+ E LLVLAGAGSGKT VL R ++ +P +IL + F Sbjct: 2 ALDLETLNPEQHEAVMTTEGPLLVLAGAGSGKTRVLTYRIAHMIEDLGVAPWEILAITFT 61 Query: 251 RKAAEEMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFI 308 KAA EM ER+ + + TFH++ + I++ ++ + + I Sbjct: 62 NKAAAEMRERLGALVGPAARGMWVSTFHSMCVRILRANAEVIGFTKNFTIYADDDSKRLI 121 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 + Q + L +R+ + + + Sbjct: 122 KDIMAQLDIDPKRF-------------------------PVNALRNRISSAKNELILPDA 156 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-- 426 + A + + L NA DF L+ ++ + Sbjct: 157 FDQRA-----------SDPIALVAARVYHELQKRLHQANAFDFDDLLMYTWLLFKHHPNV 205 Query: 427 ---FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 + ++++LVDE+QD + + A+ L ++ + VGDD Q+IY + GA + Sbjct: 206 LEAYQERFRYLLVDEYQDTNHAQYAITTLLAARHK--NIMVVGDDDQSIYSWRGADIRNI 263 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDE 543 F +++ + L+ YR + I + AN I N + K L + K + Sbjct: 264 LEFEQDYPQTRTVKLEKNYRSTATILDAANAVIAHNVNRKSKRLVPTGDTGDKIHVYMAS 323 Query: 544 SQLDA------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 + D +++ +I + R + + +I T Sbjct: 324 DERDEGRWIAGEIERRHTQGTSYNQIALFYRTNAQSRMLEDMLLRAGVPYRIVGGT 379 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 39/106 (36%), Gaps = 22/106 (20%) Query: 582 TRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAE 641 + MT+HA+KG + D V + G++E + + E Sbjct: 633 MSDDGTAVTLMTVHAAKGLEFDCVFVAGMEETIFPHMNSI------------NDATGVEE 680 Query: 642 ERRLMYVALTRARHRVWALFNKENP----------SPFVEILKNLD 677 ERRL YVA+TRAR +++ S F+ + Sbjct: 681 ERRLAYVAITRARKQLYITCASNRKLFGQTQANPTSRFLAEIPAEL 726 >UniRef50_C7MAK0 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria RepID=C7MAK0_BRAFD Length = 932 Score = 424 bits (1090), Expect = e-117, Method: Composition-based stats. Identities = 99/411 (24%), Positives = 162/411 (39%), Gaps = 46/411 (11%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNPAQ AV + LL++AGAGSGKT VL R LL EA P +IL + F KAA Sbjct: 121 GLNPAQREAVEHRGSPLLIVAGAGSGKTRVLTRRIAHLLHSREALPGEILAITFTNKAAA 180 Query: 256 EMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM ER+ E + + TFH+ + I+++ + + S +A I K Sbjct: 181 EMRERVGELVGPVARSMWVSTFHSACVRILRRDAAAAGLKSSFTIYDSADSLRLITTIAK 240 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 + R LASR+ + + + Sbjct: 241 DLQLD-------------------------TKKHAPRALASRISSLKNDLVDPIDFADQA 275 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FI 428 ++ + + +A + + L+ NAVDF LI + +L + + Sbjct: 276 ESAK--------NPFERTLAQIYTNYTERLRQANAVDFDDLIGLTVTLLRENPAIREGYR 327 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 ++H+LVDE+QD + + L+ L + +L VGD Q+IY F GA + F + Sbjct: 328 RRFRHLLVDEYQDTNTAQYQLVRELVGDDPHASLTVVGDSDQSIYAFRGATIRNIIEFEQ 387 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDA 548 +F L+ YR I AN I++N G+ KK L + ++ + + + Sbjct: 388 DFPSARTIVLEQNYRSTQNILAAANSVIEENEGRRKKNLWTDQGEGEQITLYVADDEQAE 447 Query: 549 ------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 +D L + I I R + A ++ ++ T Sbjct: 448 ARYIGRQIDALVDDGRRAGDIAIFYRANAQSRALEDQLIRIGLPYRVVGGT 498 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 39/109 (35%), Gaps = 22/109 (20%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 + MT+H +KG + V + G+++G+ + E Sbjct: 718 EDQFVTLMTLHTAKGLEFPVVFLTGMEDGTFPHNRTLSDPEELEEERRL----------- 766 Query: 645 LMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVARK 683 YV +TRAR +++ + S F++ + + VAR Sbjct: 767 -AYVGITRAREKLFLTRAQMRALWGQTQFMPASRFLDEVPESVLDVARA 814 >UniRef50_D1A297 ATP-dependent DNA helicase PcrA n=3 Tax=Actinomycetales RepID=D1A297_THECD Length = 768 Score = 424 bits (1089), Expect = e-117, Method: Composition-based stats. Identities = 97/467 (20%), Positives = 174/467 (37%), Gaps = 62/467 (13%) Query: 193 ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 LNP Q AV++ LL++AGAGSGKT VL R +LLA + P QIL + F K Sbjct: 10 LLDGLNPQQRAAVLHTGGPLLIVAGAGSGKTRVLTHRIAYLLAERDVHPAQILAITFTNK 69 Query: 253 AAEEMDERIRERLHTED--ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 AA EM ER++ + + TFH+ + I+++ ++++ S AA + +A Sbjct: 70 AAGEMRERVQALVGPRSGAMWVMTFHSACVRILRREARRLGFPSNFSIYDAADAQRLMAL 129 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 ++ + + ++++ + + + + Sbjct: 130 VCRELDLDPRR-------------------------YPPKSFSAQVSNLKNELIDYEAFK 164 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KG 425 A + + +A + ++ L+ A+DF LI + +L+ Sbjct: 165 ARA-----------STHLEQKLAEAYEMYQARLQQAGAMDFDDLIMTTVHLLQAFPEAAE 213 Query: 426 RFISPWKHILVDEFQDISPQRAALLAALR----KQNSQTTLFAVGDDWQAIYRFSGAQMS 481 + ++HILVDE+QD + + L+ L + L VGD Q+IY F GA + Sbjct: 214 HYRRRFRHILVDEYQDTNHAQYELVRLLTESPGEDVGPAELCVVGDADQSIYAFRGATIR 273 Query: 482 LTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL 541 F +F + L+ YR I AN I++N + K L S +K V + Sbjct: 274 NILEFERDFPDATTILLEQNYRSTQTILSAANAVIERNAHRKPKRLWSDQGEGEKIVGYV 333 Query: 542 DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQ 601 +++ D + + + A + + + F+ + G Sbjct: 334 ADNEHDEAAFVAAEVDRLTDA----GLARPGDVAVFYRTNAQSRVFEEVFIRV----GLP 385 Query: 602 ADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 V G F + L RR++ V Sbjct: 386 YKVV-------GGVRFYERKEVRDLLAYLRVLANPADTVSLRRILNV 425 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 43/111 (38%), Gaps = 22/111 (19%) Query: 582 TRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAE 641 + + MT+H +KG + V + G+++G A E Sbjct: 588 PEDEQGVVTLMTLHTAKGLEFPVVFLTGMEDGVFPHLRAMSN------------PQELEE 635 Query: 642 ERRLMYVALTRARHRVWAL---------FNKENP-SPFVEILKNLDVPVAR 682 ERRL YV +TRAR R++ + NP S F+ + + V R Sbjct: 636 ERRLAYVGITRARQRLYLTRAVMRSAWGAPQVNPASRFLSEVPSSLVKWER 686 >UniRef50_Q6GFF2 ATP-dependent DNA helicase pcrA n=81 Tax=cellular organisms RepID=PCRA_STAAR Length = 730 Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 89/412 (21%), Positives = 157/412 (38%), Gaps = 51/412 (12%) Query: 191 QVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFG 250 + +N Q+ AV E LL++AGAGSGKT VL R +LL + SP +L + F Sbjct: 2 NALLNHMNTEQSEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNVLAITFT 61 Query: 251 RKAAEEMDERIRERLHTED--ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFI 308 KAA EM ER+++ + + I TFH++ + I+++ + ++ I + I Sbjct: 62 NKAAREMKERVQKLVGDQAEVIWMSTFHSMCVRILRRDADRIGIERNFTIIDPTDQKSVI 121 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 + K N + R + + ++ Sbjct: 122 KDVLK-------------------------NENIDSKKFEPRMFIGAISNLKNELKTPAD 156 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-- 426 AQ E +++A + ++ L A+DF LI I + E+ Sbjct: 157 AQKEA-----------TDYHSQMVATVYSGYQRQLSRNEALDFDDLIMTTINLFERVPEV 205 Query: 427 ---FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 + + +++I VDE+QD + + L+ L + L VGD Q+IY + GA + Sbjct: 206 LEYYQNKFQYIHVDEYQDTNKAQYTLVKLLASK--FKNLCVVGDSDQSIYGWRGADIQNI 263 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL--- 540 +F +++ E L+ YR I AN I+ N + K L + +K Sbjct: 264 LSFEKDYPEANTIFLEQNYRSTKTILNAANEVIKNNSERKPKGLWTANTNGEKIHYYEAM 323 Query: 541 ---LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + + + K K + + IL R + E + Sbjct: 324 TERDEAEFVIREIMKHQRNGKKYQDMAILYRTNAQSRVLEETFMKSNMPYTM 375 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 20/106 (18%) Query: 584 WPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEER 643 + + MT+H++KG + V I+G++E A + D EER Sbjct: 545 DTENGVTLMTMHSAKGLEFPIVFIMGMEESLFPHIRAIKSE----------GDHEMQEER 594 Query: 644 RLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVP 679 R+ YVA+TRA ++ PS F++ + + Sbjct: 595 RICYVAITRAEEVLYITHATSRMLFGRPQSNMPSRFLKEIPESLLE 640 >UniRef50_C5C915 ATP-dependent DNA helicase PcrA n=7 Tax=Actinomycetales RepID=C5C915_MICLC Length = 858 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 105/487 (21%), Positives = 178/487 (36%), Gaps = 57/487 (11%) Query: 130 QQIRQALSALPLPVNRLEEFDNCREAWRKCQA-WLKDIESARLQHNQAYTEAMLTEYADF 188 + AL PL +R + A + + + + + Sbjct: 2 ADLFSALGRSPLNPSRTRRDADPETALPGLVPPAVTRAAADPEAGARGWGDDAAGAAVAH 61 Query: 189 FRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLA 248 LNP Q+ AV + LL++AGAGSGKT VL R WLLA G A P +IL + Sbjct: 62 TPDSLVEGLNPQQSAAVTHTGAPLLIVAGAGSGKTRVLTHRIAWLLATGRARPHEILAIT 121 Query: 249 FGRKAAEEMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHEL 306 F KAA EM ER+ + + + TFH+ A+ +++ + + + S +A Sbjct: 122 FTNKAAAEMRERVAGLIGPTAQRMWISTFHSSAVRLLRNEAANIGLKSTFTIYDSADSLR 181 Query: 307 FIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMH 366 + KQ + L +R+ + + Sbjct: 182 LVTTVAKQ-------------------------HELDPKRFAPKALLNRISSLKNELVEA 216 Query: 367 GGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR 426 A + P + +A + + + L+ NA+DF LI + + E Sbjct: 217 DDYAATVAEGDP---------WGRAVAAVYRDYTARLRQANALDFDDLIGMTVHMFEAFP 267 Query: 427 -----FISPWKHILVDEFQDISPQRAALLAALRK--------QNSQTTLFAVGDDWQAIY 473 + ++H+LVDE+QD + + L+ L + L VGD Q+IY Sbjct: 268 RVLDNYRRRFRHVLVDEYQDTNHAQYRLIRLLAGPAGDPEGVETPGGELTVVGDSDQSIY 327 Query: 474 RFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNG 533 F GA + F ++F + L+ YR I + AN I++NP + K L + Sbjct: 328 AFRGADIRNIVEFEQDFTDAVTIKLEQNYRSTQTILDAANAVIERNPDRRPKRLWTAEGE 387 Query: 534 DKKAVTL------LDESQLDALLDKLSGY-AKPEERILILARYHHMRPASLEKAATRWPK 586 V + + A +D+L + + R + A E+ TR Sbjct: 388 GPAIVGYAAENESAEAEWIAATIDRLQDEDGIRPSDVAVFYRTNAQSRALEERLVTRGIP 447 Query: 587 LQIDFMT 593 ++ T Sbjct: 448 YRVIGGT 454 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 22/107 (20%) Query: 586 KLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRL 645 + Q+ MT+H +KG + V + G++ G + ++ AEERRL Sbjct: 633 QGQVTLMTLHTAKGLEFPVVFLTGMEHGVFPHARSMT------------DEKELAEERRL 680 Query: 646 MYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVAR 682 YV LTRAR R++ + PS F+ + + R Sbjct: 681 AYVGLTRARRRLFLTRAEARSLWGQHQFNPPSQFLGEIPEALIDWER 727 >UniRef50_B1I553 ATP-dependent DNA helicase PcrA n=6 Tax=Bacteria RepID=B1I553_DESAP Length = 718 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 92/407 (22%), Positives = 160/407 (39%), Gaps = 51/407 (12%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 + LNPAQA AV + LLVLAGAGSGKT VL +R +L+ P +IL + F +A Sbjct: 10 LTELNPAQAEAVCHPGGPLLVLAGAGSGKTRVLTSRIAYLVRVHRVEPHRILAITFTNRA 69 Query: 254 AEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 A EM ER+ + +D+ TFHA L I+++ +K+ A + I + Sbjct: 70 AREMKERVASLVPHAVDDLWVMTFHAACLRILRREIEKLGYSKNFVIYDEADQQTVIKDC 129 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 K+ + + Q ++ + + + Sbjct: 130 LKELNLEPRQH-------------------------PPAMFSAAISWQKNALVGPA---- 160 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GR 426 E + + +L A + A++ L+ NA+DF L+ A+ + + + Sbjct: 161 -------EFAGAAYDQHQELTARVYAAYQARLERNNALDFDDLLFLAVRLFREFPPVLEQ 213 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + + H+LVDE+QD + + L+ L + + L VGD Q IY + GA + F Sbjct: 214 YRRRFLHLLVDEYQDTNHAQYVLVNLLAQTHR--NLTVVGDPDQCIYGWRGADLRNILNF 271 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL----- 541 ++ + L+ YR RI E AN I+ N + +K L + + V Sbjct: 272 ERDYPDARVVKLEQNYRSTGRILEAANHVIRFNRHRKEKELWTARGAGEAPVLHQARDER 331 Query: 542 -DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKL 587 + + + +L + + R H ++ Sbjct: 332 AEARFVAREIRRLRAQGRSYRDFAVFYRTHAQSRVLEDELLRHGVPY 378 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 22/122 (18%) Query: 566 LARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESI 625 LA + + + Q+ MT+H++KG + V + G++EG A Sbjct: 529 LAEFLNDLALYTDLDRFDGESSQVTLMTLHSAKGLEFPVVFLTGMEEGVFPHTRAFS--- 585 Query: 626 MEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKN 675 E EERRL YV +TRAR R++ + PS F+ + Sbjct: 586 ---------EPVEMEEERRLCYVGITRARERLFLTLAESRLLYGNVYYGVPSRFLREIPP 636 Query: 676 LD 677 Sbjct: 637 EL 638 >UniRef50_UPI0001C3187F UvrD/REP helicase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3187F Length = 746 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 95/416 (22%), Positives = 168/416 (40%), Gaps = 51/416 (12%) Query: 191 QVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFG 250 + LN Q AVV+GE LL+LAGAGSGKT VL R +L+ G+A P++IL + F Sbjct: 11 DALLAGLNEPQREAVVHGEGPLLILAGAGSGKTRVLTHRIAYLVGTGQARPDEILAITFT 70 Query: 251 RKAAEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFI 308 KAA+EM ER+ + T + TFH+ +++ + ++ + + + Sbjct: 71 NKAAQEMRERVEMLVGRRTRAMWVMTFHSACARMLRADAHRLGYTRQFTIYDQSDARRLV 130 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 ++ + + + + +R Sbjct: 131 KRAIEELDVDPKRF-------------------------TPGAIHHEISDAKNKLRDAEA 165 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE----- 423 + S + +A + K ++ L NA+DF L+ +A+ +LE Sbjct: 166 YAQMV-----------GSFFEQTVADVYKLYESELHRMNAMDFDDLLVRAVNVLELFPEV 214 Query: 424 KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 + R+ ++H+LVDE+QD + + L + ++ L VGDD Q+IY F GA + Sbjct: 215 RRRYADNFRHVLVDEYQDTNHVQYRWLQLIAGEHR--NLAVVGDDSQSIYGFRGADIRNI 272 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKA-VTLLD 542 F ++F + + L+ YR I + AN I+ N GQ +K L + V LD Sbjct: 273 LDFEDDFPDAKVVKLEQNYRSTQTILDAANAVIRNNRGQREKELWTDLGIGDPIKVRELD 332 Query: 543 ESQLDAL-----LDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 + +A ++++ I + R + + Q+ T Sbjct: 333 DEHAEARFVAGEIERIVDEGVSRNEIAVFYRTNAQSRVLEDTLVRAQIGYQVIGGT 388 Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 52/160 (32%), Gaps = 30/160 (18%) Query: 542 DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEK-------AATRWPKLQIDFMTI 594 + L++L A + + L L++ R + + MT+ Sbjct: 510 ESQGRIENLEELVNVAAEYDGSVDLREEAPSLAGFLQQIALVADADGRRDDEGLVTLMTL 569 Query: 595 HASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRAR 654 H +KG + V ++G +EG A E +EE YV LTRA Sbjct: 570 HNAKGLEYPIVFLLGCEEGVFPHQRAIEEGGLEEERRL-------------AYVGLTRAM 616 Query: 655 HRVWALFNKEN----------PSPFVEILKNLDVPVARKP 684 ++ + + S FV+ + +P Sbjct: 617 RDLYMTYARTRAVFGSRSYGARSRFVDEVPIGLTDRNERP 656 >UniRef50_C2L0R7 ATP-dependent DNA helicase PcrA n=1 Tax=Oribacterium sinus F0268 RepID=C2L0R7_9FIRM Length = 793 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 100/403 (24%), Positives = 170/403 (42%), Gaps = 47/403 (11%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q A +GE LL+LAGAGSGKT VL R +L+ SP QIL + F KAA+E Sbjct: 7 LNKEQYEAATHGEGPLLILAGAGSGKTRVLTHRIAYLILEKGISPYQILAITFTNKAAQE 66 Query: 257 MDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M +R+ + L +I TFH++ L I+++ + S + + + K+ Sbjct: 67 MRDRVNQLLPERQGEIWVSTFHSMCLRILRREIGNLGYDSDFSIYDTDDQKTVMRQVFKE 126 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 K +R + S L + + G + ++ + Sbjct: 127 LQIDSKMLK-------------------------ERLVLSALSQVKNQ----GRSVSDYL 157 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRFIS 429 PE+ D + ++ ++ LK NA+DF L+ + + EK ++ Sbjct: 158 LEDPEDFLDG------KIRACIRLYEEKLKQNNALDFDDLLLRCKELFEKFPAVLEKYQE 211 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 +++ILVDE+QD + + L+ L K+ + VGDD Q+IYRF GA + +F + Sbjct: 212 RFRYILVDEYQDTNDVQFHLVYLLAKKY--QNICVVGDDDQSIYRFRGANVENILSFESH 269 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDE---SQL 546 F + L+ YR + I ++AN I +N + +K L + K E + Sbjct: 270 FPNCKVVKLEQNYRSTAPILDLANVVIAENQHRKQKKLWTAEKEGLKVSFQEYESAKEEA 329 Query: 547 DALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 A++ + + +L R + E+ QI Sbjct: 330 AAVIRGIRDAGWSYKDQAVLYRTNAQSRLLEEQCIHWNIPYQI 372 Score = 95.0 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 54/179 (30%), Gaps = 28/179 (15%) Query: 513 NRFIQQ--NPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYH 570 + I + + +K L + + ++ + L + L Sbjct: 470 SALIDRILQDTEYEKDLQAEGAIEAESRMENIQELQGKLQSYIEENGDEGSLSAFLEEVS 529 Query: 571 HMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEAL 630 + + + +I MT+H +KG + V +VGL EG + E Sbjct: 530 LLSDLD----RSDLTEDKITLMTLHGAKGLEFPVVYLVGLNEGLFPSAQSMFTPEEREEE 585 Query: 631 LPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVP 679 L YV +TRA ++ ++ S FV+ + + Sbjct: 586 RR------------LFYVGITRAEKELYLTAGRDRVVHGQYQSMLVSSFVDDVPEEHLE 632 >UniRef50_D2NR24 Superfamily I DNA and RNA helicase n=17 Tax=Bacteria RepID=D2NR24_9MICC Length = 985 Score = 421 bits (1082), Expect = e-116, Method: Composition-based stats. Identities = 97/434 (22%), Positives = 171/434 (39%), Gaps = 63/434 (14%) Query: 193 ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 ++ LN Q AV++ LL++AGAGSGKT VL R +LLA A+P QIL + F K Sbjct: 139 LTAGLNERQEEAVLHSGSPLLIVAGAGSGKTRVLTHRIAYLLATHRATPGQILAITFTNK 198 Query: 253 AAEEMDERIRERLHTED--ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 AA EM ERI + + TFH+ + ++++ + + + S + + ++ Sbjct: 199 AAAEMRERIEALVGPRAKHMWISTFHSFCVRVLRREAAALGLKSTFTIYDSTDSQRLLSL 258 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 K+ N + + + +R+ + + Sbjct: 259 IIKEL-------------------------NLDTKKFTAKAVGNRISALKNELVSAEAYA 293 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR---- 426 + + + P E K +A + + L+A N++DF LI + + +L+K Sbjct: 294 SRVASDNPYE---------KTIAQIYTVYTQRLRAANSLDFDDLIGRTVFLLKKFPEIAN 344 Query: 427 -FISPWKHILVDEFQDISPQRAALLAALRKQN--------------SQTTLFAVGDDWQA 471 + ++HILVDE+QD + + L+ L + L VGD Q+ Sbjct: 345 YYRRKFRHILVDEYQDTNHAQYQLVRELVGAHVKAPADRGPYPDAVPPAELTVVGDSDQS 404 Query: 472 IYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLT 531 IY F GA + T F +++ L+ YR I AN I++NP + K L + + Sbjct: 405 IYAFRGADIRNITDFEKDYPNAHTILLEQNYRSTQNILSAANAVIERNPDRRPKKLWTAS 464 Query: 532 NGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDF 591 K + + ES+ + +R+ A + + L+ Sbjct: 465 GAGAKIIGYVAESEHAEA----RFITREIDRLADEHGVQPGDVAIFYRTNAQSRTLEDML 520 Query: 592 MTIHASKGQQADYV 605 M + G V Sbjct: 521 M---RA-GLPYRVV 530 Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 49/138 (35%), Gaps = 22/138 (15%) Query: 542 DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQ 601 D Q + ++ R +AA + + MT+H +KG + Sbjct: 680 DLEQFLEHVALVADADSIPNRPASAEGESASAAQIAAEAAEAKAQGMVTLMTLHTAKGLE 739 Query: 602 ADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALF 661 V + G++ G A ++ +EERRL YV LTRA R++ Sbjct: 740 FPVVFLTGMEHGLFPHQRALT------------DEKEMSEERRLAYVGLTRAMERLYLTR 787 Query: 662 NKEN----------PSPF 669 ++ PSPF Sbjct: 788 SETRTMWGKSQFNPPSPF 805 >UniRef50_C6A858 Superfamily I DNA and RNA helicase n=18 Tax=Bifidobacterium RepID=C6A858_BIFLB Length = 939 Score = 420 bits (1081), Expect = e-116, Method: Composition-based stats. Identities = 110/521 (21%), Positives = 192/521 (36%), Gaps = 86/521 (16%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN QA+AV +LL+ AGAGSGKT VL R W+L + A P Q+L + F KAA Sbjct: 50 DLNEQQAQAVQYRGPALLIGAGAGSGKTRVLTRRIAWILTQFGAWPSQVLAITFTNKAAA 109 Query: 256 EMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM ER+ + + + TFH+ + I+++ +++ + S A E I Sbjct: 110 EMRERLGALIGGVADRMWVSTFHSACVRILRRDGEQIGLKSGFTIYDTADCERLIKLVCA 169 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 + + R + +R+ + + + A A+ Sbjct: 170 DFNIDIKRF-------------------------TPRSILARISDYKNQLTDASTALAQY 204 Query: 374 IASAPEEIR----DLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR--- 426 +R + A + ++ L NAVDF LI + + +L Sbjct: 205 APDFKPGMRHYSFGQIGDPEPVYAVVYAEYQYRLALANAVDFDDLIVRTVELLRTQPHVA 264 Query: 427 --FISPWKHILVDEFQDISPQRAALLAALRK---------------QNSQTTLFAVGDDW 469 + +++ILVDE+QD + + L+ L ++ + VGD Sbjct: 265 EYYRHKFRYILVDEYQDTNHAQYVLVRELAGVDAHEPSDPMATEAGKSGPAWVTVVGDSD 324 Query: 470 QAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS 529 Q+IY F GA + F ++F + L+ YR I + AN I N + K L + Sbjct: 325 QSIYAFRGADIRNIQDFEKDFPDARTIMLEQNYRSTQTILDAANAVIAHNSARKPKKLWT 384 Query: 530 LTNGDKKAVTLLDE-------SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAAT 582 K + + +L P + I+ R + + E Sbjct: 385 ALGEGDKIIGYAADTAQLEAHWIAQQILHLHEEKGLPYSDMAIMYRANAQSRSLEEGLIQ 444 Query: 583 RWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEE 642 Q+ T K + V +A++ P +D Sbjct: 445 AHIPYQLIGGT----KFYERREV---------------KDAIAYLQAIVNPADDINM--- 482 Query: 643 RRLMYV---AL-TRARHRVWALFNKENPSPF--VEILKNLD 677 RR++ V L TRA ++ N+ N + + +E L++++ Sbjct: 483 RRILNVPKRGLGTRAESQLTLFANEHNQTFWWAIEQLEDIE 523 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 22/110 (20%) Query: 584 WPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEER 643 ++ MT+H +KG + V + G+++G+ A +EER Sbjct: 626 HDSGKVTLMTLHTAKGLEYPIVFLTGMEQGTFPHSRAMEN------------MDELSEER 673 Query: 644 RLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVARK 683 RL YV +TRA+ R++ PS F++ + + + R+ Sbjct: 674 RLAYVGITRAKRRLYLTRAAVRAQWGRQSEMMPSQFLDEIPDSLIDWKRR 723 >UniRef50_C2CV85 Possible ATP-dependent DNA helicase n=2 Tax=Bifidobacteriaceae RepID=C2CV85_GARVA Length = 964 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 112/546 (20%), Positives = 190/546 (34%), Gaps = 92/546 (16%) Query: 178 TEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARG 237 T A + + Q LNP Q++AV +LL+ AGAGSGKT VL R W+LA Sbjct: 85 TSAQSSNIPEINPQSLLEGLNPQQSKAVQYTGPALLIGAGAGSGKTRVLTRRIAWILANR 144 Query: 238 EASPEQILLLAFGRKAAEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSK 295 +A P QIL + F KAA EM ER+ + + TFH+ + I++ + + S Sbjct: 145 KAWPSQILAITFTNKAAAEMRERLASLIGNSANSMWVSTFHSACVKILRAHGDSIGLKSG 204 Query: 296 LENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASR 355 ++ E + + + + + + L +++ Sbjct: 205 FSIYDSSDCERLVKIIASELNIDIKK---------------------FTPKLLLSKISDF 243 Query: 356 LDRWVSLMRMHGGAQAEMIASAPEEIRDLFS---KRIKLMAPLLKAWKGALKAENAVDFS 412 + V+ + A F+ L A + ++ L NAVDF Sbjct: 244 KNNLVTWQENLKNYAPDYKPGASVSGASSFNAAGNADALYAAVYAEYQNRLSVSNAVDFD 303 Query: 413 GLIHQAIVILEKGR-----FISPWKHILVDEFQDISPQRAALLAALRKQN---------- 457 LI + +L + + +++ILVDE+QD + + L+ L + Sbjct: 304 DLIMLTVKLLRQNPQVSAYYKRKFRYILVDEYQDTNHAQYVLIRELAGVDDAGVDDYSTD 363 Query: 458 -------------SQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRF 504 Q+++ VGD Q+IY F GA + F ++F L+ YR Sbjct: 364 STVSSVSPDSTQLPQSSITVVGDSDQSIYAFRGADIRNIQDFEQDFPSATTIMLEQNYRS 423 Query: 505 NSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDE-------SQLDALLDKLSGYA 557 I + AN I N + K L + V + + + Sbjct: 424 TQTILDAANAVISNNANRKPKKLWTSLGKGSPIVGYVADNAQGEASWVAQEIARLAGEDG 483 Query: 558 KPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGF 617 I I+ R + + + Q+ T K + V Sbjct: 484 VNYSDIAIMYRANSQSRSLEDALIKSGLPYQLVGGT----KFYERREV------------ 527 Query: 618 PAAARESIMEEALLPPVEDFPDAEERRLMYV------ALTRARHRVWALFNKENPSPFVE 671 +++ P +D RR++ V A RA ++ + KEN F Sbjct: 528 ---KDALAYLQSIANPDDDVNM---RRILNVPKRGLGA--RAESQIT-SYAKENSISFWS 578 Query: 672 ILKNLD 677 L +D Sbjct: 579 ALSQID 584 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 60/181 (33%), Gaps = 22/181 (12%) Query: 513 NRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHM 572 ++ ++ + + + D + +D + P+ + + Sbjct: 622 SKVVENVLNESGLLQDLRESKDPQDEFRVDNLSQLQSVAAEYEQNTPDANVAGFLETTAL 681 Query: 573 RPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLP 632 S + ++ MT+H +KG + V + G+++G+ Sbjct: 682 VADSDQLPDQGEDTGKVTLMTLHTAKGLEYPVVFLTGMEQGTFPHSRCVDN--------- 732 Query: 633 PVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVAR 682 EERRL YV +TRA+ ++ + E S F++ + + R Sbjct: 733 ---QKELCEERRLAYVGITRAKKILYVTWAAERSQWGKSAEMIQSQFLDEIPADLISWKR 789 Query: 683 K 683 K Sbjct: 790 K 790 >UniRef50_C8W206 ATP-dependent DNA helicase PcrA n=2 Tax=Clostridiales RepID=C8W206_DESAS Length = 737 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 93/410 (22%), Positives = 160/410 (39%), Gaps = 52/410 (12%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 + LNP QA AV + + LL+LAGAGSGKT VL R LL + SP IL + F KA Sbjct: 14 LAGLNPVQAEAVRHVDGPLLILAGAGSGKTRVLTHRIAHLLLSEKVSPFNILAITFTNKA 73 Query: 254 AEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 A EM ER+ L D+ TFH+ L I+++ + + I + Sbjct: 74 ALEMRERVAAILPGVARDLWVATFHSTCLKILRRDGQLLGYGQDFSVYDEGDRHTLIKDC 133 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 K+ + D + ++S + + + + Sbjct: 134 IKELNID-------------------------DKTFSPQYVSSIISKAKNKLI------- 161 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR----- 426 + R+ + + A + K ++ LK NAVDF L+ + + ++ Sbjct: 162 ----DEDKYDREADNILTQKAAGIYKLYQKKLKTYNAVDFDDLLFLVVRLFKEHPNVLER 217 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + +++ILVDE+QD + + L+ L +++ L VGD Q IY + GA + +F Sbjct: 218 YQHKFRYILVDEYQDTNYVQYLLVKMLAQKSR--NLCVVGDPDQGIYGWRGADIQNILSF 275 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL---LDE 543 ++ E L+ YR I + AN I N G+ +K L + + + Sbjct: 276 ERDYPEACVVTLEQNYRSTQNILDAANHIISYNQGRKEKRLWTDAGKGSPIIVCKSRDEF 335 Query: 544 SQLDALLDKLSG----YAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 ++ +++++ +L R H E I Sbjct: 336 AEARHVVEQIKHLHLVEGVSYSECAVLYRTHAQSRVLEEIMLRYGLPYNI 385 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 48/123 (39%), Gaps = 22/123 (17%) Query: 566 LARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESI 625 L + + +++ MT+H +KG + +V +V ++EG A Sbjct: 537 LGEFLSELSLVTDADRDNGEAERVNMMTLHTAKGLEFPFVFLVAMEEGIFPHNRALS--- 593 Query: 626 MEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFN----------KENPSPFVEILKN 675 + EERRL YV +TRAR +++ ++ PS F+E + Sbjct: 594 ---------DAGELEEERRLAYVGMTRARQKLYLSYSFQRTIYGNTNYCRPSRFLEEIPV 644 Query: 676 LDV 678 V Sbjct: 645 DLV 647 >UniRef50_B1C8W2 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C8W2_9FIRM Length = 741 Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 98/411 (23%), Positives = 159/411 (38%), Gaps = 48/411 (11%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV + LL+LAGAGSGKT ++ R +++ G A P +IL L F KAA E Sbjct: 7 LNEKQQEAVTCVDGPLLILAGAGSGKTRTIIHRIAYIIENGYAKPWEILALTFTNKAAGE 66 Query: 257 MDERIRER-LH-TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M ERI + T DI TFH++ I++ + S + + K Sbjct: 67 MRERIDSMGIPFTSDIWMGTFHSICARILRIEGHNLGFTSNFSIYDDDDTKRVVKSILKD 126 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 + D E + S++ + + Sbjct: 127 L-------------------------DISDKEFPVEGVKSQISLLKNNLETSDDY----- 156 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRFIS 429 E +A + ++ L + NA+DF L+ ++ K ++ + Sbjct: 157 --LEEHDDFEGGYTEARIAQIYAEYQKRLLSSNAMDFDDLLLNMNILFAKCPEVLNKYKN 214 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 +K+ILVDE+QD + + A+++ L + + + GDD Q+IY + GA + F E+ Sbjct: 215 RFKYILVDEYQDTNLSQYAIVSKLAEDHR--NICVCGDDDQSIYGWRGASIRNILEFEED 272 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLD-- 547 F + L+ YR I AN I+ N ++ K L + + +K L S L+ Sbjct: 273 FEDAAVIRLEQNYRCTKNILNAANGVIEHNQRRMGKTLFTDNDEGEKIKYLNANSDLEES 332 Query: 548 -----ALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 + + P I IL R + E R QI T Sbjct: 333 SLISREIFCLNEYHGIPYSDIAILYRTNAQSRMLEEGLMRRNIPYQIVAGT 383 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 22/108 (20%) Query: 582 TRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAE 641 ++ MT+H +KG + + V + G++E A E E Sbjct: 547 YDEDSSKVLLMTLHNAKGLEFNIVFMPGMEENLFPTYRAVNEDS------------EMEE 594 Query: 642 ERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVP 679 ERRL YV +TRAR +++ + PS F+ + + + Sbjct: 595 ERRLCYVGITRARKQLYMSSAESRRVYGRNEYRNPSRFLLEVPDELIE 642 >UniRef50_C8WTI7 ATP-dependent DNA helicase PcrA n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WTI7_ALIAD Length = 756 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 99/409 (24%), Positives = 167/409 (40%), Gaps = 51/409 (12%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 LN Q AV + +LV+AGAGSGKTSVL R +L+A P IL + F KA Sbjct: 11 LKGLNEKQREAVTATDGPVLVIAGAGSGKTSVLTRRIAYLIAERRVPPWAILAITFTNKA 70 Query: 254 AEEMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 A EM+ERI + DI TFHA+ I+++ + S AA + Sbjct: 71 AREMEERIERLVGPVASDIWTSTFHAMCARILRRDIHHLGYTSAFTVLDAADQVSLVRRL 130 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 ++ + + + R + + + + +R Sbjct: 131 MQEMNIDVRKFE-------------------------PRAVLHAISQHKNELR------- 158 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR----- 426 SA + + S K++ + A++ L+ A+DF L+ + + + K Sbjct: 159 ----SAEKALDLAGSPYDKMVGDVYLAYERRLRENQALDFDDLLVKTVELFRKVPDVLAY 214 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + + HI VDE+QD + + L+ L + + L VGD Q+IY + GA + F Sbjct: 215 YQHRFSHIHVDEYQDTNHAQYVLVKLLAE--RRRNLCVVGDSDQSIYGWRGADIRNILEF 272 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKA---VTLLDE 543 ++ + L+ YR RI +AN+ IQ N +L+K L + +KA V + Sbjct: 273 QRDYPDARVIRLEQNYRSTGRILRIANQVIQHNQMRLEKNLWTDRGEGEKAKLFVAPDER 332 Query: 544 SQLDALLDKLSG---YAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + D + D+++ + + IL R + E R +I Sbjct: 333 VEADWVADEIARMVANGREYRDVAILYRTNAQSRVLEEAFLQRGIPYRI 381 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 41/113 (36%), Gaps = 22/113 (19%) Query: 579 KAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFP 638 + R ++ MT+HA+KG + V +VGL+EG A E Sbjct: 555 RPGRREDLDEVSMMTLHAAKGLEFPVVFLVGLEEGVFPHRRALDGGEELEEERRL----- 609 Query: 639 DAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVA 681 YV +TRA R++ + PS F+ + D+ A Sbjct: 610 -------CYVGITRAMERLYLTTCRSRMLFGERRSFTPSRFLSEMPASDIERA 655 >UniRef50_UPI00016C0C66 ATP-dependent DNA helicase PcrA n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0C66 Length = 731 Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 92/408 (22%), Positives = 161/408 (39%), Gaps = 52/408 (12%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q +AV + LL+LAGAGSGKT VL R L+ + P +IL + F KAA E Sbjct: 3 LNDRQKKAVQHVNGPLLILAGAGSGKTRVLTQRIANLIENHQVQPWEILAITFTNKAAAE 62 Query: 257 MDERIRERLHT---EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 M ER+ + +++ TFH++ + I+++ + + +A ++ I + K Sbjct: 63 MRERMTNDVGEDVLKNMWISTFHSMCVRILRRFGESIGYTKYFTIYDSAEQKITIKDVMK 122 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 + N + E + S + + + A E Sbjct: 123 E-------------------------MNINEKEFQVGAVFSHISSKKNQFILPRQALKE- 156 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FI 428 + R ++A + A++ L N +DF L+ ++ + Sbjct: 157 ---------SEGNFREHIIAKIYDAYQDKLYENNVMDFDDLLVNVCILFNNHPDVLSFYQ 207 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 + +K+ILVDE+QD + + L+ L ++ L VGDD Q+IY + GA +S F + Sbjct: 208 NKFKYILVDEYQDTNCVQYELIRQLADKHK--NLCVVGDDDQSIYGWRGADISNILEFEK 265 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL-------L 541 +F L+ YR I E AN ++ N + K L + ++ Sbjct: 266 DFENTTIIKLEQNYRSTKNILEAANAVVKNNENRKPKVLFTDNETGEQIELYVVKNEYRE 325 Query: 542 DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + + LS Y + + IL R + EK ++ Sbjct: 326 ADVIAAQISKDLSEYRRDYKDFAILYRTNAQSRVLEEKMIQSSIPYRM 373 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 36/188 (19%), Positives = 61/188 (32%), Gaps = 29/188 (15%) Query: 506 SRIGEVANRFIQQNP-GQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERIL 564 I + I + K D+ S+ A + Sbjct: 472 ENILALLQAIIVKTDYNNFLKETEPEDAADRILNVREFVSKAAAYVQSNEE--------A 523 Query: 565 ILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARES 624 L + + + MT+H+SKG + V + GL+EG +A + Sbjct: 524 NLNNFLEEITLVADVDNYDQNSNAVVLMTLHSSKGLEFPVVFMPGLEEGLFPSHMSASDE 583 Query: 625 IMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILK 674 + EERRL YV +TRAR +++ L +E PS F+ L Sbjct: 584 ----------DKTKLEEERRLCYVGITRAREKLYILQAEERMTYGQIKAVEPSRFIAELP 633 Query: 675 NLDVPVAR 682 + + + Sbjct: 634 AEVIRINK 641 >UniRef50_B8FP41 ATP-dependent DNA helicase PcrA n=10 Tax=Firmicutes RepID=B8FP41_DESHD Length = 755 Score = 417 bits (1071), Expect = e-115, Method: Composition-based stats. Identities = 91/411 (22%), Positives = 157/411 (38%), Gaps = 54/411 (13%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 LNP Q +AV + E LL+LAGAGSGKT VL R L+A+G P IL + F KA Sbjct: 4 LEDLNPVQRQAVEHREGPLLILAGAGSGKTRVLTYRIAHLIAQG-VEPWHILAITFTNKA 62 Query: 254 AEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKV-PIVSKLENDTAARHELFIAE 310 A+EM +R+ + + TFH+ + I++ + + I Sbjct: 63 AQEMRDRVYSLVGSEGRGLWVATFHSACVRILRSEIGYLPGYSRSFVIYDSGDQLALIKS 122 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 K+ N + + R + + + + + Sbjct: 123 CMKEL-------------------------NLDEKKFAPRAIEAVISDAKNKLLTPEDFS 157 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR---- 426 R + + + + L A NA+DF +I + + + Sbjct: 158 -----------RRAKDYFEQKAERVYELYLKKLLANNALDFDDIIMLTVRLFRENPEVLS 206 Query: 427 -FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 + +++ILVDE+QD + + AL+ L K+ L VGDD Q+IY F GA + Sbjct: 207 QYQDKFRYILVDEYQDTNHAQYALVNLLAKKYR--NLCVVGDDDQSIYMFRGADVQNILD 264 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQ 545 F ++ E + L+ YR I + AN +Q N + +K L + + V + +++ Sbjct: 265 FERDYPEAKTLKLEQNYRSTKSILQAANSVVQNNTERKEKSLWTENEDGQPIVYYVADNE 324 Query: 546 LDA-------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 D + L+ + +L R + E+ +I Sbjct: 325 HDEARYMGERIQRLLNVEGRKFNEFAVLYRTNAQSRVIEERFMKEGIPYRI 375 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 23/157 (14%) Query: 538 VTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHAS 597 VT + + D + + + L + + + + MTIH++ Sbjct: 515 VTAEYDEKADNYETAVVQEGIEDALVPGLTGFLEQVSLVAQIDSLDQADDAVVMMTIHSA 574 Query: 598 KGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRV 657 KG + V + G++EG + + ++ AEERRL YVA+TRAR R+ Sbjct: 575 KGLEFPVVFLGGMEEGIFPSSRSMLDPVL------------LAEERRLCYVAITRARERL 622 Query: 658 WALFNK----------ENPSPFVEILKNLDVPVARKP 684 + + + PS F + + V V R P Sbjct: 623 YLAYAQQRMLYGRTQYNRPSEFFQEIP-THVLVDRDP 658 >UniRef50_Q0TN58 ATP-dependent DNA helicase PcrA n=12 Tax=Clostridium RepID=Q0TN58_CLOP1 Length = 751 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 83/407 (20%), Positives = 159/407 (39%), Gaps = 52/407 (12%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q A + +L+LAGAGSGKT VL R +++ + P IL + F KAA E Sbjct: 7 LNKEQYEAATTIDGQVLILAGAGSGKTRVLTHRIAYMIEN-DIKPYNILAITFTNKAAGE 65 Query: 257 MDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M ER++ + ++ TFH+ + I+++ K+ ++ + I K+ Sbjct: 66 MRERVKSLVGEVANNMWISTFHSSCVRILRREIDKLGYSKDFTIYDSSDQKTLIKLVMKE 125 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 + + + + + + ++ + E Sbjct: 126 LNINEKEITDL-------------------------EILGTIGKAKDNIQSAQSFKKE-- 158 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FIS 429 + + R +A ++ LK NA+DF LI + + + K + + Sbjct: 159 --------NEDNFRKNKIADAYLLYQKKLKENNALDFDDLIVKTVELFRKHNDVLEFYQN 210 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 +K+I++DE+QD + + L ++ + VGDD Q IY + GA + F ++ Sbjct: 211 KFKYIMIDEYQDTNKAQYEFAKLLAAKHK--NICVVGDDDQCIYAWRGADIRNILDFEKD 268 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL------LDE 543 + E + L+ YR I E AN+ I+ N + K L + +K ++ Sbjct: 269 YPEAKVVKLEQNYRSKGNILEAANKVIKNNAERKFKILRTEQVEGEKISIHRAYSDKMEA 328 Query: 544 SQLDALLDKLSG-YAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + + + ++KL + +L R + E +I Sbjct: 329 AFVVSEIEKLKNDNGYKYKDFAVLYRTNAQSRNFEEALRRAGIPYRI 375 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 50/170 (29%), Gaps = 26/170 (15%) Query: 523 LKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAAT 582 K L + ++ E + ++ + + L + + Sbjct: 489 YLKSLKDSKLIEDQSRIENLEELVSDAVEFEKSNEEDKSLSAYLEKVA----LVQDMDDL 544 Query: 583 RWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEE 642 + MT+H+SKG + V +VG++ G A E Sbjct: 545 EAEDNYVMLMTVHSSKGLEFPTVFLVGMENGIFPNAACFEHDN------------QMEEA 592 Query: 643 RRLMYVALTRARHRVWALFNKENP----------SPFVEILKNLDVPVAR 682 RRL YV +TRA +++ + S F+ + Sbjct: 593 RRLCYVGITRAEEKLYMTSAETRMIFGKTVAYGQSDFISEIPANIKDYVN 642 >UniRef50_B2GM51 ATP-dependent DNA helicase UvrD1 n=10 Tax=Actinomycetales RepID=B2GM51_KOCRD Length = 818 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 100/432 (23%), Positives = 161/432 (37%), Gaps = 59/432 (13%) Query: 191 QVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFG 250 + + LN Q AV + LL++AGAGSGKT VL R LLA G A +IL + F Sbjct: 34 EQLVAGLNEPQRAAVEHSGAPLLIVAGAGSGKTRVLTHRIAHLLATGRARRGEILAITFT 93 Query: 251 RKAAEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFI 308 KAA EM ERI E + + TFH+L + I+++ +K + + + +A I Sbjct: 94 NKAAAEMRERIAELVGDSARTMWISTFHSLCVRILRREAKTLGLNTNFSIYDSADSLRLI 153 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 + KQ + + R+ + + Sbjct: 154 TQVAKQ-------------------------HELDPKRFAPKAIQHRISALKNELVDDET 188 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-- 426 A ++ P E +A + + + L+A NA+DF LI + + + Sbjct: 189 CLARASSTDPFES---------AVAQVYRGYTQRLRAANAMDFDDLIGETVHMFRAFPQV 239 Query: 427 ---FISPWKHILVDEFQDISPQRAALLAALRKQN----------SQTTLFAVGDDWQAIY 473 + ++H+LVDE+QD + + AL+ L + L VGD Q+IY Sbjct: 240 LEYYRRRFRHVLVDEYQDTNHAQYALVRELVGGDSPGHTDESGIPPAELTVVGDSDQSIY 299 Query: 474 RFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNG 533 F GA + T F +F L+ YR I AN I QN + K L + Sbjct: 300 AFRGADIRNITDFERDFPAARTIMLEQNYRSTQNILSAANAVISQNADRRDKKLWTAEGD 359 Query: 534 DKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 V E++ + + ++ I A + + L+ M Sbjct: 360 GAPIVGYAAENEHEEARFIAEEIDRLQDEHGIR----PGDVAVFYRTNAQSRSLEEILMR 415 Query: 594 IHASKGQQADYV 605 + G V Sbjct: 416 V----GLPYKVV 423 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 22/109 (20%) Query: 584 WPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEER 643 + + MT+H +KG + V + G++ G + + EER Sbjct: 615 RDQGVVTLMTLHTAKGLEFPVVFLTGMEHGIFPHQRSFA------------DPSSMEEER 662 Query: 644 RLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVAR 682 RL YV +TRAR R++ + SPF++ + + R Sbjct: 663 RLAYVGITRARQRLYITRAESRSLWGQSQFNPASPFLDEIPAHLIDWKR 711 >UniRef50_A7VTM6 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VTM6_9CLOT Length = 740 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 86/409 (21%), Positives = 160/409 (39%), Gaps = 50/409 (12%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 +NP Q AV++ E LL+LAGAGSGKT+VL+ R +++ + A P QIL + F KA Sbjct: 8 LKKMNPRQLEAVLHTEGPLLILAGAGSGKTTVLINRIAYIIDQSLAKPWQILAITFTNKA 67 Query: 254 AEEMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 A E+ ER+ L D+ A TFH+ I+++ ++ S + + + Sbjct: 68 AGELKERLTAMLGDTGGDVWAATFHSTCARILRRDGDRIGYSSHFTVYDTDDSKRLVKDC 127 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 +K + D + + S + M QA Sbjct: 128 QKALNID-------------------------DKMISHKSILSEISHAKDSMLSPADYQA 162 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR----- 426 + R+ + + + ++ L+ +A+DF L+ + + + Sbjct: 163 AAGS----------DFRLAKIGAVYELYQKRLREADAMDFDDLLGNTVELFRQCPDVLEY 212 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + + +++I+VDE+QD + + + L ++ L VGDD Q+IY+F GA + +F Sbjct: 213 YQNRFRYIMVDEYQDTNQVQYEFVRLLAEK--SKNLCVVGDDDQSIYKFRGATIENIMSF 270 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQL 546 +++ + L+ YR I AN I N + K L + K ++ Sbjct: 271 EKSYPNAKVIRLEQNYRSTKNILNAANAVISNNEERKGKTLWTENPEGDKIQIHTSSNEQ 330 Query: 547 DA------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 D + + + +L R + + +I Sbjct: 331 DEAGFVATTILEQVAKGRKYSDFAVLYRMNSQSNILEKVFVKSGIPYRI 379 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 56/170 (32%), Gaps = 22/170 (12%) Query: 523 LKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAAT 582 L+K +K ++ L L + + L+ + + Sbjct: 489 LEKTGYIEALRGEKEEAETRIENINELASNLLKFQEENGEEATLSAFLEEVSLMTDIDNY 548 Query: 583 RWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEE 642 + MT+H++KG + V + G +EG L + EE Sbjct: 549 DETADTVVMMTMHSAKGLEFPVVFLPGFEEGIFP------------GLQAIYDPNEIQEE 596 Query: 643 RRLMYVALTRARHRVWA----------LFNKENPSPFVEILKNLDVPVAR 682 RRL YVA+TRA+ ++ ++ PS F + + R Sbjct: 597 RRLCYVAITRAKESLYLLNADSRMLFGSTSRNRPSRFSLEIPLDLINKTR 646 >UniRef50_Q28NL8 ATP-dependent DNA helicase, Rep family n=11 Tax=Rhodobacteraceae RepID=Q28NL8_JANSC Length = 817 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 95/420 (22%), Positives = 155/420 (36%), Gaps = 56/420 (13%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNPAQ AV + +L+LAGAG+GKT L AR L++ G A P +IL + F KAA Sbjct: 33 GLNPAQIAAVNQLDGPVLMLAGAGTGKTRALTARIAHLMSTGTARPNEILAVTFTNKAAR 92 Query: 256 EMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM R+ L TFHA+ + ++++ ++ + S + + Sbjct: 93 EMKTRVGHLLGQPAEGMPWLGTFHAICVKLLRRHAELAGLKSNFTILDTDDQTRLMKQLI 152 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 D R L S +D W + + Sbjct: 153 -------------------------IAEEIDDKRWPARALGSIIDGWKNRALTPDKVPSA 187 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RF 427 L ++ LKA NA DF L+ I I + ++ Sbjct: 188 -----------DHGAFNHQGVKLYAQYQARLKALNACDFGDLLLHVIQIFQDNDDLLQQY 236 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 +++ILVDE+QD + + L L + + VGDD Q+IY + GA++ F Sbjct: 237 QRWFRYILVDEYQDTNVAQYLWLRLLAAGHK--NICCVGDDDQSIYGWRGAEVGNILRFE 294 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAV---TLLDES 544 ++F L+ YR I A+ I N G+L K L + +K + Sbjct: 295 KDFPGAHVVRLEQNYRSTGHILAAASGVIAGNTGRLGKTLWTDGEDGEKVRLIGHWDGDE 354 Query: 545 QLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADY 604 + + +++ K + A L +A+ + + F+TI G Sbjct: 355 EARWIGEEIEAMGKGTRGM---EPIGPNSIAILVRASHQMRAFEDRFLTI----GLPYRV 407 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 34/146 (23%), Positives = 50/146 (34%), Gaps = 21/146 (14%) Query: 549 LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIV 608 L+ L K E L + ++ ++ MT+HA+KG + V + Sbjct: 559 RLENLKELVKALENFENLQGFLEHVSLIMDNEQDDQEP-KVTLMTLHAAKGLEFPAVFLP 617 Query: 609 GLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN--- 665 G ++G + ES EERRL YV +TRA F Sbjct: 618 GWEDGLFPSQRSMDES----------GQAGLEEERRLAYVGITRAEEVCTISFAGNRRVY 667 Query: 666 -------PSPFVEILKNLDVPVARKP 684 PS F++ L V V P Sbjct: 668 GQWQSQMPSRFIDELPEDHVEVLTPP 693 >UniRef50_A8HYL6 DNA helicase II n=8 Tax=Rhizobiales RepID=A8HYL6_AZOC5 Length = 835 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 100/401 (24%), Positives = 154/401 (38%), Gaps = 51/401 (12%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 LNP Q AV + +LVLAGAG+GKT VL R +L++G A P QIL + F KA Sbjct: 69 LDGLNPEQREAVETLDGPVLVLAGAGTGKTRVLTTRIAHILSQGRAYPSQILAVTFTNKA 128 Query: 254 AEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 A EM ERI + TFH++ + I+++ + V + S + + Sbjct: 129 AREMKERIHAMVGDTVEGMPWLGTFHSIGVRILRRHHELVGLKSGFTILDTDDQLRLLKQ 188 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 + R LAS +D W + Sbjct: 189 LI-------------------------AAEEIDEKRWPARMLASAIDGWKNRGLTPEQVP 223 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR---- 426 A A+ + L A++ LKA NAVDF L+ + I + + Sbjct: 224 AGEGAAFANGRGQM----------LYAAYQARLKALNAVDFGDLLLEGIRLFRENPDVLA 273 Query: 427 -FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 + +K+ILVDE+QD + + L L + + VGDD Q+IY + GA++ Sbjct: 274 EYHRKFKYILVDEYQDTNVAQYLWLRLLAQ--GSRNVCCVGDDDQSIYGWRGAEVDNILR 331 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL----- 540 F +F + L+ YR I A+ I N G+L K L S +K Sbjct: 332 FESDFPGAKVIRLERNYRSTGHILAAASHLIAFNEGRLGKTLFSEGEKGEKVTVTGAWDS 391 Query: 541 -LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKA 580 + + ++ L +I IL R ++ Sbjct: 392 GEEARAIGDEIEALQRAGHALSQIAILVRASFQMREFEDRF 432 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 31/108 (28%), Positives = 45/108 (41%), Gaps = 20/108 (18%) Query: 586 KLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRL 645 + MT+H++KG + D V + G +EG A E EERRL Sbjct: 606 DDAVQIMTLHSAKGLEFDTVFLPGWEEGLFPHQRALDE----------QGKAGLEEERRL 655 Query: 646 MYVALTRAR----------HRVWALFNKENPSPFVEILKNLDVPVARK 683 YV +TRAR R+ ++N PS F++ L + V V Sbjct: 656 AYVGITRARASARVYFASNRRIHGMWNSTVPSRFLDELPDTHVDVQES 703 >UniRef50_A5GA79 UvrD/REP helicase n=10 Tax=Desulfuromonadales RepID=A5GA79_GEOUR Length = 678 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 91/411 (22%), Positives = 164/411 (39%), Gaps = 53/411 (12%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 + S LNP Q AV + E +LLVLAGAGSGKT V+ R LL + IL + F Sbjct: 2 LNLSTLNPQQLAAVKHTEGALLVLAGAGSGKTGVITYRIAHLLLNKKVPAMNILAVTFTN 61 Query: 252 KAAEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFI 308 KAA+EM ER+ + + I TFH+L + I+++ + + + + + Sbjct: 62 KAAKEMRERVDSLVGRQACKGIIISTFHSLGVRILRRNIELLGYKRNFSIYSTSDQIGLV 121 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 + ++ + G +D + + ++++ ++ + Sbjct: 122 KQIMREVNID---------------------GKKYDADSIIWKISAAKNKLI-------- 152 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-- 426 + + A + ++ ALKA NA+DF +I +L+ Sbjct: 153 -------PPDRFTPRFGDEYELMAAEVYPRYQSALKAFNAIDFDDIIMLTADLLQNHPEV 205 Query: 427 ---FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 + +++++VDE+QD + + L+ L L VGDD Q+IY + GA + Sbjct: 206 LQHWQERFRYVMVDEYQDTNASQYLLVNLLAGGYG--NLCVVGDDDQSIYGWRGADVGNI 263 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKK---AVTL 540 F ++F E L+ YR I E AN I N + +K L + + + V Sbjct: 264 LDFEKDFKECRVVKLEQNYRSTGNILEAANHVIGHNAKRKEKRLWTASGSGRPLDLIVMQ 323 Query: 541 LDESQLDALLDKLS----GYAKPEERILILARYHHMRPASLEKAATRWPKL 587 DE + +++++ + IL R + E+ Sbjct: 324 DDEEEATTVVERMQMERFKHNLAYSDFAILYRTNAQSRPFEEQLRFEDIPY 374 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 58/177 (32%), Gaps = 30/177 (16%) Query: 516 IQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEER--------ILILA 567 + + +L K L + + ++++ E + Sbjct: 478 LAEKGRRLFKQLGLEDELYRTIDDPALARRKVENVEQIINSMAAYEERIPKPTLSGFLEK 537 Query: 568 RYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIME 627 K + + M++H+SKG + YV +VG++E + Sbjct: 538 VSLMDEDRFSGKDKKEHGRDAVTLMSLHSSKGLEFPYVFLVGMEEEILPHKRSI------ 591 Query: 628 EALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILK 674 EDF EERRL YV +TRAR + + PS F+E + Sbjct: 592 ------YEDFTVDEERRLCYVGITRARKHLIMTRCLQRKKYGKLQERVPSRFLEEIP 642 >UniRef50_D0BN23 ATP-dependent DNA helicase PcrA n=5 Tax=Firmicutes RepID=D0BN23_9LACT Length = 755 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 85/404 (21%), Positives = 155/404 (38%), Gaps = 51/404 (12%) Query: 198 NPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEM 257 N Q AV + + LL++AGAGSGKT VL R ++LA E P IL + F KAA EM Sbjct: 2 NDRQKEAVQHTQGPLLIMAGAGSGKTRVLTHRMAYILAEEEVHPWNILAITFTNKAAREM 61 Query: 258 DERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQC 315 ER+ + + ED+ TFH++ + I+++ + + + + + K+ Sbjct: 62 KERVSQLVGPQAEDMWVSTFHSMCVRILRRDIELLGYQRSFTICDPSEQQTAMKRILKKL 121 Query: 316 SEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIA 375 ++ R + +R+ + + + Sbjct: 122 DID-------------------------SEKYDYRMILNRISQAKNDLE----------- 145 Query: 376 SAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FISP 430 E + +++A + ++ L +DF LI + + +K + Sbjct: 146 DVEEFSKKYTGYVEQIIAKCYREYQKELAKSMTLDFDDLIMLTVQLFQKHPETLQYYQQK 205 Query: 431 WKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENF 490 +++I VDE+QD + + L+ L K+ + VGD Q+IY + GA MS F +++ Sbjct: 206 FQYIHVDEYQDTNHAQYRLVTMLAKK--FKNICVVGDADQSIYGWRGADMSNILEFEKDY 263 Query: 491 GEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDA-- 548 + L+ YR I + AN I+ N + K L + + +S+ D Sbjct: 264 QNAKVVLLEQNYRSTKTILQAANHVIENNFNRKVKKLWTENEEGQPITYYRAQSEQDEGR 323 Query: 549 ----LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 + L + IL R + E + Sbjct: 324 YVLSQIQSLLRDGYHYDDFAILYRTNAQSRVMEENLLKSNIPFR 367 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 21/106 (19%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 + MT+HA+KG + V I+GL+EG + E+ + EERRL Y Sbjct: 546 MVTLMTLHAAKGLEFPVVFIIGLEEGIFPSLRSIMENGDD-----------VEEERRLAY 594 Query: 648 VALTRARHRVWAL----------FNKENPSPFVEILKNLDVPVARK 683 V +TRA +++ PS F+ + ++ Sbjct: 595 VGITRAEQKLFLTNAYSRLLYGRTQTNRPSRFLLEIGEDLFDSKQQ 640 >UniRef50_D1VUE5 ATP-dependent DNA helicase PcrA n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUE5_9FIRM Length = 720 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 95/411 (23%), Positives = 167/411 (40%), Gaps = 51/411 (12%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 ++ LN Q A++ E LL+LAGAGSGKT V+ ++ +L+ E +IL + F Sbjct: 1 MDIDSLNDKQKEALLYNEGPLLILAGAGSGKTKVVTSKIAYLIEN-EVPSWRILAITFTN 59 Query: 252 KAAEEMDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIA 309 KAA EM ER+ + + + TFHA+ + I+++ + + S A I Sbjct: 60 KAAREMRERVAMLIDEDVSPMWIGTFHAICVRILRKNIENLGYGSNYNIYDRADQNTIIK 119 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 E K+ N + R + S++ W + Sbjct: 120 ESYKEL-------------------------NINKEIYNSRTILSKISSWKNEELTPSEV 154 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR--- 426 + + + ++ LK NA+DF L+ + + +L + Sbjct: 155 LDG----------NKEDIFNFNAGKIYEFYQNKLKENNALDFDDLLIKTVELLREFPDVR 204 Query: 427 --FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 + + +K+I VDE+QD + + L+ + L VGD+ Q+IY++ GA +S Sbjct: 205 EFYQNKFKYIFVDEYQDTNSIQYKLIKLFCGKAP--NLTVVGDNDQSIYKWRGADISNIL 262 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKA------V 538 F ++F + L+ YR I +VAN I+ NP +L K L + G +K V Sbjct: 263 NFQKDFPGAKIIKLEQNYRSTQNILDVANSVIKNNPQELSKSLWTKRQGGEKVYYKEFSV 322 Query: 539 TLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + +E + + L+ E + IL R + E + +I Sbjct: 323 SNEEEFAVTNKILGLNYKGYSFEDMAILYRTNAQSRGFEESLSREGINYKI 373 Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 72/217 (33%), Gaps = 44/217 (20%) Query: 494 ERCDLDTTY-----RFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL------- 541 E Y R I AN I + K L ++ + V Sbjct: 436 EVIKNIENYEDLNVRAKKNIKSFAN-LINLLIER--KDLLNVGELAELVVDESQYVEDLK 492 Query: 542 -----DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHA 596 + + +D+L ++ L+ Y + L ++ MT+HA Sbjct: 493 NQNTLEARTKISNIDELISNIMSYDKETSLSDY-LSNMSLLTDIDKTSDAKGVNLMTVHA 551 Query: 597 SKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHR 656 +KG + V +VG++EG + +EE RRL YVA+TRA Sbjct: 552 AKGLEFKIVFLVGMEEGLFPIIRQDEDEDIEEE-------------RRLCYVAITRAEDL 598 Query: 657 VWALFNKEN----------PSPFVEILKNLDVPVARK 683 ++ +K S F+ +++ V K Sbjct: 599 LFISSSKTRYLYGKMTPKIKSRFINEMQDTIEIVEEK 635 >UniRef50_C8WV10 UvrD/REP helicase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WV10_ALIAD Length = 705 Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 98/415 (23%), Positives = 161/415 (38%), Gaps = 55/415 (13%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 LNP Q AV LLV+AGAGSGKTSVL R +L+A + +IL + F KA Sbjct: 8 LRGLNPEQRDAVTTTSGPLLVVAGAGSGKTSVLTRRIAYLIAHAGVAVHEILAITFTNKA 67 Query: 254 AEEMDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 A EM RIR+ + D+ TFH++ + I+++ + ++ + E + + Sbjct: 68 AREMKTRIRDLIGPRADDLWMGTFHSICVRILRREADRLGYQPNFTILDSEDQEALVQQC 127 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 R + R+ +W + Sbjct: 128 LLDLGYDLKTHDA-------------------------RSIKHRISQWKN---------- 152 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----R 426 + + + + +++ + L A NA+DF LI + +LE+ + Sbjct: 153 ----EGATRVVNESNPSDLIADRVMELYNKRLFAANAMDFDDLIGHTVRLLEQNDDLRDK 208 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + ++H+LVDE+QD + + LL L ++ L AVGD QAIY + GA F Sbjct: 209 YQEKFRHVLVDEYQDTNGIQFRLLRLLCAKHR--NLCAVGDADQAIYAWRGADSEHMLRF 266 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL----- 541 +F + + L YR I + AN I NP + K L S K + + Sbjct: 267 ERDFPDAKIVVLTRNYRSTQEILDAANSVIAHNPRRRPKELRSTRGHGDKPLVVRLPDGA 326 Query: 542 -DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQID-FMTI 594 + + +++ E +L R + A EK R + MT Sbjct: 327 AEAHYVAEAIEEHVRNGGRYEDCAVLYRANAQSRAIEEKLLERAIPYTVVGGMTF 381 Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 40/108 (37%), Gaps = 22/108 (20%) Query: 581 ATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDA 640 K + MT+HASKG + V +VG++EG + + Sbjct: 541 ERDRGKGSVRLMTLHASKGLEFPVVFLVGMEEGLFPHARSMD------------DPLRIE 588 Query: 641 EERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDV 678 EER L YV LTRA R+ PS F+ ++ V Sbjct: 589 EERNLCYVGLTRAMDRLVLTHAAWRTLYGQTVAREPSRFLAEIREDLV 636 >UniRef50_Q2RGX9 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria RepID=Q2RGX9_MOOTA Length = 729 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 97/407 (23%), Positives = 155/407 (38%), Gaps = 53/407 (13%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV + LLVLAGAGSGKT VL R L+ G PE IL + F KAA+E Sbjct: 11 LNGPQQEAVKHRGTPLLVLAGAGSGKTRVLTYRVAALIQEG-VRPENILAVTFTNKAAQE 69 Query: 257 MDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M ER+ + + TFH+ + I+++ + + + + E K+ Sbjct: 70 MKERLEGLVGEAARGLWVSTFHSACVRILRREAHLLGYRPNFVIYDTDDQQAALKEVLKE 129 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 + D + R LA + + ++ Sbjct: 130 L-------------------------DLDDKKYPPRSLAQVISMAKNDLKTP-------- 156 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FIS 429 + + R + + + ++ L+ NA+DF LI Q + + ++ + Sbjct: 157 ---ERFLDGAATFREQQQGQIYRRYQEKLRELNAMDFDDLIMQTVFLWQQNPLVLRYYQQ 213 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 W+HILVDE+QD + + L+ L + L VGD Q IY + GA + AF E+ Sbjct: 214 RWQHILVDEYQDTNHAQYILVRLLAGKGD--NLCVVGDPDQGIYGWRGADIGNILAFEED 271 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLD-- 547 F L+ YR I + AN IQ N G+ +K L + + + D Sbjct: 272 FPRARVILLEENYRSTRPILQAANAVIQHNEGRREKRLWTRRREGELLHLYRATDERDEG 331 Query: 548 -----ALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + + +P +L R H A E +I Sbjct: 332 RFIAGEVYRRHQQEGRPFSDFAVLYRTHAQSRALEEAFIQAGVPYEI 378 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 22/98 (22%) Query: 591 FMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVAL 650 MT+H +KG + V + GL+EG + + EERRL YV + Sbjct: 554 LMTMHTAKGLEFPVVFLAGLEEGVFPHFRSLD------------DPAEMEEERRLCYVGM 601 Query: 651 TRARHRVWALFNKEN----------PSPFVEILKNLDV 678 TRAR ++ PS F++ + + Sbjct: 602 TRAREVLYLTHAWTRNLYGSTMSNPPSRFLDEIPADLI 639 >UniRef50_Q3A0S9 ATP-dependent DNA helicase PcrA n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A0S9_PELCD Length = 737 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 88/409 (21%), Positives = 159/409 (38%), Gaps = 52/409 (12%) Query: 193 ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 + LN Q +AV++ + LL+LAGAGSGKT L R +L+ + + P Q+L + F K Sbjct: 4 LLTSLNDCQRQAVLHEDGPLLILAGAGSGKTRTLTHRIAYLIQQQQVEPWQVLAVTFTNK 63 Query: 253 AAEEMDERIRERLH-TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 AA EM ER++ + + + TFHA I+++ + + + I + Sbjct: 64 AAAEMRERLQSLVGNIDGLWISTFHAACARILRRDGEVLGYGRDFTIYDDQDQQRLIKDC 123 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 Q + K R +A+ +D+ + + Sbjct: 124 LAQLRITEKDLK-------------------------PRAVATAIDQAKNRGLLPEEYIP 158 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGR 426 R + +A + + ++ L+ NA+DF L+ Q + + + Sbjct: 159 -------------GDHRGEQVARVYELYQKRLQQANALDFGDLLLQTVRLFREYSHIRDA 205 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + + H+LVDEFQD + + A++ AL L VGDD Q+IY + GA++ F Sbjct: 206 YRRRFAHLLVDEFQDTNQVQYAMVKALADDGRH--LCVVGDDDQSIYAWRGAEIGNILNF 263 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKK------AVTL 540 +F L+ YR ++ I E A + N G+ K L + + L Sbjct: 264 ERDFPGASVIRLEQHYRSSATILEAAGEVVACNIGRKGKTLWTDNPAGEPLTLEPLPDDL 323 Query: 541 LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + + A + +L + + + R + E + Sbjct: 324 EEARFVAAEIARLRDAGRHLRDVAVFYRTNAQSRVLEETLVREGLPYVM 372 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 30/134 (22%), Positives = 49/134 (36%), Gaps = 27/134 (20%) Query: 566 LARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESI 625 L Y + + ++ MT+HA+KG + V + G++EG A Sbjct: 529 LQEYLEQVALVTDLDSYDTRLDRVTLMTLHAAKGLEFPVVFMTGMEEGIFPHGRA----- 583 Query: 626 MEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILK- 674 E EERRL YV +TRA +++ + PS F+ + Sbjct: 584 -------AGERDDVEEERRLCYVGMTRAMQKLYLTHARRRRIYGDYQYNAPSRFLAEIPP 636 Query: 675 ----NLDVPVARKP 684 + P +KP Sbjct: 637 HLMGDKPAPALQKP 650 >UniRef50_A1AUN0 ATP-dependent DNA helicase PcrA n=10 Tax=Desulfuromonadales RepID=A1AUN0_PELPD Length = 762 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 95/407 (23%), Positives = 158/407 (38%), Gaps = 49/407 (12%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 LN Q AV++GE LL+LAGAGSGKT V+ R L+ P IL + F KAA Sbjct: 5 KHLNQPQKSAVLHGEGPLLILAGAGSGKTRVITHRIAHLIHNHGVRPWNILAVTFTNKAA 64 Query: 255 EEMDERIRERLHTED-ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM ER+ L D TFHA I+++ + S E Sbjct: 65 REMSERVSRLLGGGDAPLIATFHAACGRILRREIHHLGFDSSFAIYDERDCER------- 117 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 ++ + + + D + R +A+R+D + + Sbjct: 118 ------------------LLKDLLKDMDLDDKKFSPRIVAARIDDYKNRGLFP------- 152 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRFI 428 + + + A++ L+ NA+DF ++ Q + +LE + R Sbjct: 153 ---HDLDPVATGDIFNAKVVQIYAAYQERLRKCNALDFGDMLIQTVRLLEQFPEVRQRCQ 209 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 ++ I+VDE+QD +P + L+ L + + L VGDD Q+IY + GA + F + Sbjct: 210 ERFQWIMVDEYQDTNPVQYRLIRLLAGE--RRNLCVVGDDDQSIYSWRGADIRNILEFEK 267 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDA 548 +F + L+ YR + I + A + +N G+ K L + +K ES + Sbjct: 268 DFPDVAVVRLEQNYRSTTTILKAAGAVVSRNIGRRGKTLWTENPEGEKIRYHRVESDREE 327 Query: 549 ------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + L P E + + R + E + I Sbjct: 328 ARLVAREIVSLRSRGIPLEEMAVFYRTNAQSRLVEEALVSEALPYHI 374 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 53/147 (36%), Gaps = 22/147 (14%) Query: 548 ALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVII 607 L +E L+ + + K + MT+HA+KG + V + Sbjct: 508 EQLLAAMEEFCEKEPQAGLSAFLEQVSLVSDLEQGGQGKPSVTLMTLHAAKGLEFRAVFM 567 Query: 608 VGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN-- 665 +G++E A + EERRL YV +TRAR R++ L + Sbjct: 568 IGMEERLFPHVRALDDLD------------GMEEERRLCYVGMTRARERLYLLNTRRRYL 615 Query: 666 --------PSPFVEILKNLDVPVARKP 684 PS F++ + + +P Sbjct: 616 FGQEQCNPPSRFLKDIPAGLLDDGGEP 642 >UniRef50_C0VSX9 ATP-dependent DNA helicase n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VSX9_9CORY Length = 735 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 94/410 (22%), Positives = 162/410 (39%), Gaps = 53/410 (12%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 S LNP Q AV++ + LL++AGAGSGKT+VL R LL P QIL + F KAA Sbjct: 8 SDLNPQQRDAVLHDDSPLLIVAGAGSGKTAVLTRRIAHLLRFKGVQPWQILAITFTNKAA 67 Query: 255 EEMDERIRERLHTE--DITARTFHALALHIIQQGSKKV-PIVSKLENDTAARHELFIAEW 311 +EM ER+ + E ++ TFH+ + I+++ ++ V + S + + + + Sbjct: 68 KEMQERVIGLIGPEAQNMAVATFHSTCVRILRRNAQLVPGLNSNFTIYDSDDSKRLLQQI 127 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 K + R L +++ W + + A Sbjct: 128 AKDMDLDI-------------------------KKFSPRVLGNKISGWKNELIGVDDAVK 162 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR----- 426 E K++ + ++ L+ NA+DF LI + + I + Sbjct: 163 E----------------HKVIGQVYGFYQERLRRANALDFDDLIGEVVRIFREHPDVTAY 206 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + ++H+LVDE+QD + + ++AL ++ L VGD Q+IY F GA + F Sbjct: 207 YRRRFRHVLVDEYQDTNHAQYEFISALVGKDGTG-LCVVGDADQSIYAFRGATIRNIREF 265 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKA---VTLLDE 543 +F L+ YR I AN I N + KK L + K V +E Sbjct: 266 ERDFPNATTILLEQNYRSTQNILSAANAVISHNEHRGKKNLWTDQGAGPKIIGYVADREE 325 Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 + + + P + ++ R + + ++ T Sbjct: 326 DEARFIASTIDDRNLPYNEVAVMYRTNAASRVIEDVFIRTGIPYRVVGGT 375 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 67/190 (35%), Gaps = 28/190 (14%) Query: 505 NSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDE--SQLDALLDKLSGYAKPEER 562 +G++ N I G + S D+ + L+E + + + + Sbjct: 467 TQEVGDLIN-LITDVSGYRDELEKSKDPRDEARLDNLNELVAYARDFAQQARANDEDDSV 525 Query: 563 ILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAAR 622 L R + A A + + MT+H +KG + YV + G +EG + Sbjct: 526 QAFLERVSLVADADQIPDAGQG---VVTLMTLHTAKGLEFPYVFLPGWEEGQFPHMRSL- 581 Query: 623 ESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALF---------NKENP-SPFVEI 672 EERRL YV +TRAR +++ + NP S F+ Sbjct: 582 -----------GNTEEIEEERRLAYVGITRARKQLFISRALLRIAWGNPQTNPESRFLGD 630 Query: 673 LKNLDVPVAR 682 + + + R Sbjct: 631 IPSSLIEWER 640 >UniRef50_A8LAX0 ATP-dependent DNA helicase PcrA n=6 Tax=Bacteria RepID=A8LAX0_FRASN Length = 851 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 104/502 (20%), Positives = 170/502 (33%), Gaps = 97/502 (19%) Query: 193 ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 LNP Q AVV+ LLV+AGAGSGKT VL R +LLA A P +IL + F K Sbjct: 67 LLEGLNPQQRAAVVHAGSPLLVVAGAGSGKTRVLTHRIAYLLAARGARPGEILAITFTNK 126 Query: 253 AAEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 AA EM ER+ + + TFH+ + I++ + ++ S AA + I Sbjct: 127 AAGEMKERVEAIVGGRARAMWVSTFHSACVRILRSEASRLGFGSSFSIYDAADAQRLITL 186 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 + + R LA+ + + + A+ Sbjct: 187 VTRDLDLDPKRH-------------------------TARGLAAAISALKNELVDWETAR 221 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KG 425 + + +A + A++ L NA+DF LI + +L+ Sbjct: 222 DRA-----------TNHIERTVAEVYAAYQQRLTQANALDFDDLIMTTVNLLQAFPDVAE 270 Query: 426 RFISPWKHILVDEFQDISPQRAALLAALRKQN---------------------------- 457 + ++H+LVDE+QD + + L+ L ++ Sbjct: 271 HYRRRFRHVLVDEYQDTNHAQYVLIRELVGRSASSADEPAAGSGEAVYSGGSAEPDGAGW 330 Query: 458 -----------SQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNS 506 L VGD Q+IY F GA + F ++F L+ YR Sbjct: 331 PAKAVPPSGAVPSAELCVVGDADQSIYAFRGANIRNIVEFEQDFPNAAVILLEQNYRSTQ 390 Query: 507 RIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILIL 566 I AN I +N + K L S ++ V + +++ D + + L Sbjct: 391 TILSAANAVIARNAQRKPKRLWSDAGDGERIVGFVADNEHDEAAFVAEEIDRLGDENLAR 450 Query: 567 ARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIM 626 A + + + F+ + G V G F + Sbjct: 451 ----PADVAVFYRTNAQSRVFEEIFIRV----GLPYRVV-------GGVRFYERREIRDL 495 Query: 627 EEALLPPVEDFPDAEERRLMYV 648 L V RR++ V Sbjct: 496 LAYLRVLVNPTDTVNLRRILNV 517 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 46/117 (39%), Gaps = 22/117 (18%) Query: 578 EKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDF 637 + + MT+H++KG + V + GL++G + + Sbjct: 646 QIPDDDGSDGVVTLMTLHSAKGLEFPVVFLTGLEDGVFPH------------MRTLGDPT 693 Query: 638 PDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVARKP 684 EERRL YV +TRAR R++ ++ PS F+ + + V R P Sbjct: 694 GLEEERRLAYVGVTRARARLYLTRSQVRSAWGQPAYNPPSRFLGEVPDSLVEWRRLP 750 >UniRef50_A9WKU6 DNA helicase II n=2 Tax=Bacteria RepID=A9WKU6_RENSM Length = 797 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 91/425 (21%), Positives = 160/425 (37%), Gaps = 56/425 (13%) Query: 193 ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 LNP Q AV + LL++AGAGSGKT VL R +LLA G A P QIL + F K Sbjct: 30 LLHGLNPEQEAAVTHAGSPLLIVAGAGSGKTRVLSHRIAYLLATGRAHPGQILAITFTNK 89 Query: 253 AAEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 AA EM ERI + +++ TFH+ + I+++ + V + S +A I Sbjct: 90 AAAEMRERIAALIGDAAKNMWISTFHSSCVRILRREASTVGLNSSFSIYDSADSLRLITL 149 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 + + + + ++ + + Sbjct: 150 IARGLDLDPKRF-------------------------APKAMQHKISALKNELIDDDAFA 184 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR---- 426 A + +A + + + L+ NA+DF LI Q + + Sbjct: 185 A-----------TATDPFEQGVAEVYRGYTQRLRQANALDFDDLIAQTVWLFRAFPGVAD 233 Query: 427 -FISPWKHILVDEFQDISPQRAALLAALRK-----QNSQTTLFAVGDDWQAIYRFSGAQM 480 + ++H++VDE+QD + + AL+ + + L VGD Q+IY F GA + Sbjct: 234 YYRRRFRHVMVDEYQDTNHAQYALVKEIVGPAEGSGDEPAELTVVGDSDQSIYAFRGADI 293 Query: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL 540 F +++ L+ YR I AN I++NP + K L + +K + Sbjct: 294 RNIVEFEKDYPNARTIKLEQNYRSTQTILSAANAVIEKNPDRPVKRLWTAEGDGEKIIGY 353 Query: 541 LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQ 600 + E++ + + ++ A + + ++ M + G Sbjct: 354 VAENEHEEARFIAEEIDRLQDEADFR----PGDVAIFYRTNAQSRSIEEILMRV----GL 405 Query: 601 QADYV 605 V Sbjct: 406 PYRVV 410 Score = 108 bits (269), Expect = 9e-22, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 22/103 (21%) Query: 590 DFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVA 649 MT+H +KG + V + G++ G + AEERRL YV Sbjct: 599 TLMTLHTAKGLEFPAVFLTGMEHGIFP------------QARSATDAKELAEERRLAYVG 646 Query: 650 LTRARHRVWALFNKEN----------PSPFVEILKNLDVPVAR 682 LTRAR R++ + SPF++ + + R Sbjct: 647 LTRARKRLYLTRAEVRSLWGQSQYNPASPFIDEVPANLIEWKR 689 >UniRef50_C1A3F5 ATP-dependent DNA helicase UvrD1 n=31 Tax=Bacteria RepID=C1A3F5_RHOE4 Length = 830 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 96/421 (22%), Positives = 163/421 (38%), Gaps = 55/421 (13%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 LNP Q AVV+ LL++AGAGSGKT+VL R +LLA +P QIL + F Sbjct: 28 SDALLEGLNPQQREAVVHAGSPLLIVAGAGSGKTAVLTRRIAYLLAERGVTPGQILAITF 87 Query: 250 GRKAAEEMDERIRERLHTE--DITARTFHALALHIIQQGSKKV-PIVSKLENDTAARHEL 306 KAA EM ER+ + + TFH+ + I++ + + + S + Sbjct: 88 TNKAAAEMRERVAALVGPRANAMWVSTFHSSCVRILRAQAALLPGLNSNFSIYDSDDSRR 147 Query: 307 FIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMH 366 + K R LA+ + + + Sbjct: 148 LLTMISKDL-------------------------ELDTKRFSARLLATHISNLKNELVGP 182 Query: 367 GGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR 426 A E +L+A + ++ L+A NA+DF LI + + +L+ Sbjct: 183 EEAVVAADQDPAE--------LPRLIAKVYGHYQQRLRAANALDFDDLIGETVALLQAFP 234 Query: 427 -----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTT-------LFAVGDDWQAIYR 474 + ++H+LVDE+QD + + L+ L ++ L VGD Q+IY Sbjct: 235 QIAEYYRRRFRHVLVDEYQDTNHAQYMLVRELVGGAGESDHAVAPAELCVVGDADQSIYA 294 Query: 475 FSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGD 534 F GA + F ++ + L+ YR I AN I +N G+ +K L + + Sbjct: 295 FRGATIRNIEEFERDYPDARTILLEQNYRSTQNILSAANSVISKNTGRREKRLWTDSGEG 354 Query: 535 KKAVTLLDESQLDA------LLDKLSGYAK-PEERILILARYHHMRPASLEKAATRWPKL 587 + V + +++ D +D+L + I + R ++ A E Sbjct: 355 ELIVGYVADNEHDEASFVASEIDRLVDQGETKFADIAVFYRTNNSSRALEEIFIRLGVPY 414 Query: 588 Q 588 + Sbjct: 415 K 415 Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 49/150 (32%), Gaps = 25/150 (16%) Query: 543 ESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQA 602 + + G P L R + A + MT+H +KG + Sbjct: 584 DPDDEETAAMREGEPDPGSLAAFLERVSLVADADQ---LPDSDDGVVTMMTLHTAKGLEF 640 Query: 603 DYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFN 662 V + G ++G A + +EERRL YV +TRAR R++ Sbjct: 641 PVVFVTGWEDGQFPHMRAL------------GDPAELSEERRLAYVGITRARQRLYLTRA 688 Query: 663 ----------KENPSPFVEILKNLDVPVAR 682 + S F++ + + R Sbjct: 689 IMRSAWGQPIQNPASRFIQEIPEDLINWRR 718 >UniRef50_UPI00016B20E8 ATP-dependent DNA helicase PcrA n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B20E8 Length = 702 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 99/418 (23%), Positives = 165/418 (39%), Gaps = 56/418 (13%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 S LNP Q +AV E LL+LAGAGSGKT L R ++++RG A P QIL + F KA Sbjct: 2 SDKLNPIQQKAVETTEGPLLILAGAGSGKTKTLTHRIAYIISRGLAWPSQILAVTFTNKA 61 Query: 254 AEEMDERIRERLHTE------DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 A EM ER+ L+ + TFH + + I++ + I S + + Sbjct: 62 AREMRERLGSMLNQDYTQRNFMPWMGTFHGICVKILRIEGGIINIPSNFVIYDESDKKGV 121 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 + + K + Q K AS +S + Sbjct: 122 VKQAMKSLNITDKQIK-----------------------------ASAASGIISAEKNKM 152 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR- 426 +IA+A + + + K ++ + NA+DF L+ + + +L+ Sbjct: 153 NTPEIVIANARF-------PYQQQIGEIYKMYEKLKRESNALDFDDLLLETVNLLKNHPE 205 Query: 427 ----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + +K+I++DE+QD + + +++ L N + + VGDDWQ+IY + GA Sbjct: 206 VRKKWQDHFKYIMIDEYQDTNAAQYLIVSLLT--NDKKNICVVGDDWQSIYSWRGADFRN 263 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL- 541 F ++F + L+ YR I E A I +N + K + + N Sbjct: 264 ILNFEKDFSGAQIIKLEQNYRNTGAILEAAQNVIIKNNQRTDKKIWTAGNQGDPVEVYSA 323 Query: 542 -DESQLDALL-----DKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 D+ A + +K+ + IL R + + R L I T Sbjct: 324 LDDKSEAAWIANVISNKVESGEYNFDDFAILYRTNSQSYTIEQALNQRSIPLNIVGGT 381 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 33/158 (20%), Positives = 59/158 (37%), Gaps = 25/158 (15%) Query: 523 LKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAAT 582 L+K ++ D + L+ L ++P I + + + + Sbjct: 483 LEKVIDKTGYRDYILDGSPQAEDNNEYLNTLIDESRPYADI----ETYLEEVSLMSSSDL 538 Query: 583 RWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEE 642 + K + MT+HA+KG + V + G++EG + + EE Sbjct: 539 QSEKGYVTLMTLHAAKGLEFPVVFMSGMEEGILPHSRTLDGNPDD-----------LEEE 587 Query: 643 RRLMYVALTRARHRVWALFNKEN----------PSPFV 670 RRL YV +TRAR R++ + PS F+ Sbjct: 588 RRLCYVGMTRARERLYLSHSASRYQFNQRKYNDPSRFL 625 >UniRef50_A5CU47 ATP-dependent DNA helicase n=4 Tax=Actinobacteria (class) RepID=A5CU47_CLAM3 Length = 816 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 98/433 (22%), Positives = 154/433 (35%), Gaps = 66/433 (15%) Query: 193 ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 LNP Q AVV +LL++AGAGSGKT VL R L+ EA P QIL + F K Sbjct: 34 LLEGLNPEQREAVVYRGPALLIVAGAGSGKTRVLTHRIASLIESREAWPSQILAITFTNK 93 Query: 253 AAEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 AA EM ER+ L +E + TFH+ + I+++ ++ +A + I Sbjct: 94 AAAEMRERVESLLGQASEGMWISTFHSACVRILRREAEAFGFTQNFTIYDSADSRVLIKR 153 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 KQ ++ R+ + + + Sbjct: 154 IIKQLDADTLGF-------------------------TVSSVSGRISKLKNELSDADTFA 188 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR---- 426 + P E + + + + +L + NA DF LI Q + + Sbjct: 189 RTANFNDPAE---------AMFVEIFRQYTRSLASANAFDFDDLIGQTVYLFRAFPKVAA 239 Query: 427 -FISPWKHILVDEFQDISPQRAALLAALR-------------------KQNSQTTLFAVG 466 + ++H+LVDE+QD + + +L+ L +L VG Sbjct: 240 LYQRRFRHVLVDEYQDTNHAQYSLIRELTRAVAPEDVPVDTRMSTNGMGGIDGASLTVVG 299 Query: 467 DDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKP 526 D Q+IY F GA + T F +F + + L+ YR I AN I N + K Sbjct: 300 DSDQSIYAFRGADIRNITEFERDFPQSKVVLLEQNYRSTQNILTAANAVISNNFDRKDKK 359 Query: 527 LNSLTNGDKKAVTL------LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKA 580 L + K V + + + KL I + R + A E Sbjct: 360 LWTSIGDGDKIVGFTGYSGHDEAQFVADEIQKLHEEGTAYSEIAVFYRTNAQTRALEEIL 419 Query: 581 ATRWPKLQIDFMT 593 +I T Sbjct: 420 IRSAVPYRIMGGT 432 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 54/172 (31%), Gaps = 22/172 (12%) Query: 523 LKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAAT 582 L+K K ++ L ++ L + Sbjct: 542 LEKSGLVQALRASKDAQDEARAENVEELVAVTKEFSRNNPEGQLVDFLTEVSLVAAADEL 601 Query: 583 RWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEE 642 + MT+H +KG + D V + G++E + E AEE Sbjct: 602 DDSSGTVSLMTLHTAKGLEYDSVFLTGVEEDLLPHRMS------------ANEPGGPAEE 649 Query: 643 RRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVARKP 684 RRL YV +TRAR R++ PS +++ + + + P Sbjct: 650 RRLFYVGITRARRRLFISLAMTRAQFGEVNVAMPSRYLQEIPAELIDWKQSP 701 >UniRef50_UPI000051001F putative ATP-dependent DNA helicase II n=1 Tax=Brevibacterium linens BL2 RepID=UPI000051001F Length = 850 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 95/419 (22%), Positives = 164/419 (39%), Gaps = 54/419 (12%) Query: 193 ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 + LNP Q AV + LL++AGAGSGKT+VL R + LA G A P ++L + F K Sbjct: 22 LLTGLNPRQREAVAHTGSPLLIVAGAGSGKTTVLTRRIAYALATGRAHPGEVLAITFTNK 81 Query: 253 AAEEMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 AA+EM ER+R + + TFH+ + I+++ +K + + S + + +++ Sbjct: 82 AAKEMAERVRSIVGPASRAMWVSTFHSSCVRILRREAKVLGMKSNFTIYDSQDAQRLVSQ 141 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 K+ + R + R+ + ++ Sbjct: 142 ILKELGID-------------------------TKKYTPRSMLHRISNLKNDLQTPDDFI 176 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR---- 426 A E ++A + K + L+ NA DF LI + + + Sbjct: 177 PRANNPADE-----------VLADVFKRYTSRLRLANAFDFDDLISETVHLFGAFPEVAD 225 Query: 427 -FISPWKHILVDEFQDISPQRAALLAALRKQNSQTT----LFAVGDDWQAIYRFSGAQMS 481 + ++HILVDE+QD +P + AL+ AL + L VGD Q+IY F GA + Sbjct: 226 FYRRRFRHILVDEYQDTNPAQYALIKALAGDGAGGATGAELTVVGDSDQSIYAFRGATVR 285 Query: 482 LTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL 541 F ++F E L+ YR I + AN I N + K L + + V + Sbjct: 286 NIMEFEKDFPNAETILLEQNYRSTQNILDAANAVISNNQDRKDKKLWTSEGTGETIVGWV 345 Query: 542 DESQLDA-------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 E++ + + + + R + A + ++ T Sbjct: 346 AENEQAEARFIVDRVDELIDNEKYTYGDFAVFYRTNAQSRAIEDALVRSGIPYKVVGGT 404 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 43/105 (40%), Gaps = 22/105 (20%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 Q+ MT+H +KG + V + GL++G GFP A +EERRL Y Sbjct: 634 QVTLMTLHTAKGLEFPVVFLTGLEDG--GFPHARSFEN----------PSELSEERRLAY 681 Query: 648 VALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVAR 682 V LTRAR R+ + PS F+ + + Sbjct: 682 VGLTRARQRLIVTRAETRSMWGQPQYNPPSRFLSEIPESLIEWEN 726 >UniRef50_A4XKK0 ATP-dependent DNA helicase PcrA n=2 Tax=Clostridia RepID=A4XKK0_CALS8 Length = 714 Score = 407 bits (1046), Expect = e-112, Method: Composition-based stats. Identities = 89/409 (21%), Positives = 158/409 (38%), Gaps = 54/409 (13%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 LN Q AV++ E LLVLAGAGSGKT V+ R ++L G A P IL + F KA Sbjct: 4 LKELNKEQLEAVLSTEGPLLVLAGAGSGKTRVITYRIAYILNMGLAKPSNILAITFTNKA 63 Query: 254 AEEMDERIRERLHTE---DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 A+EM ERI++ + E ++ TFH+ I++ + + + + E Sbjct: 64 ADEMKERIKKLVSVESFAEMWVSTFHSACAKILRMEAHNIGFSNNFVIFDMQDRNQLLKE 123 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 + + + ++ + ++ + + +++ Sbjct: 124 CFTKLNIDE-------------------------EKLELKFVSRLISNFKNMLVGPSDVY 158 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR---- 426 E + + + + LK NA DF L++ I++ + Sbjct: 159 KE-------------GNVDPRVVEVYRLYNKLLKEYNAFDFDDLLYYTIMLFKTNPDILE 205 Query: 427 -FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 + +K+ILVDE+QD + + L+ L +++ + VGDD Q+IY F GA + Sbjct: 206 KYQHKFKYILVDEYQDTNHAQFYLIYLLSQKHR--NICVVGDDDQSIYSFRGADVRNILE 263 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL---- 541 F F + + L+ YR I AN I+ N + K L + N +K Sbjct: 264 FENVFPDAKVIKLEKNYRSTKTILSAANEVIKNNRNRKPKRLWTDNNEGEKIYLYPAFDE 323 Query: 542 --DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 + + + + L I IL R + ++ + Sbjct: 324 VDEANFVSMSIKNLIQGGIKPSEIGILYRTNAQSLNFENALSSHSIPYK 372 Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 19/101 (18%) Query: 584 WPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEER 643 + ++ MT+HA+KG + + V + GL+EG + E ++ EER Sbjct: 541 QKEDKVMLMTVHAAKGLEFEVVFLTGLEEGLFPLLRSEGEIELQN---------ELEEER 591 Query: 644 RLMYVALTRARHRVWALFNKEN----------PSPFVEILK 674 RL YVA+TRA+ + + S F++ + Sbjct: 592 RLCYVAITRAKRFLVLTYANNRRVFGRFSSRQKSSFIDEIP 632 >UniRef50_Q1PY53 Strongly similar to ATP-dependent DNA helicase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY53_9BACT Length = 729 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 83/416 (19%), Positives = 153/416 (36%), Gaps = 57/416 (13%) Query: 198 NPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEM 257 Q A+ + + LL++AGAGSGKT V+ R G+L++ G SP IL + F KAA EM Sbjct: 8 TDKQREAITHIDGPLLIVAGAGSGKTRVITRRIGYLMSEG-ISPYNILAITFTNKAANEM 66 Query: 258 DERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSE 317 ER+++ + + TFH + I+++ + + I Sbjct: 67 AERVKKFSSHKGMWVSTFHKMCSRILRKDIELLGYSKDFTIYDTVDQLNRIKSIMADLEI 126 Query: 318 KKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASA 377 A K R + S + + + Sbjct: 127 DTAHWK-------------------------PRSIISSISNAKNKLI-----------DH 150 Query: 378 PEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FISPWK 432 +++A + K + LK+ NA+DF L+ + + +L+ + +K Sbjct: 151 ERFAATASDIYHQMVAKIYKKYDTMLKSGNALDFDDLLIKTVELLKIRPDVLSSYQERFK 210 Query: 433 HILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGE 492 +IL+DE+QD + + A+ L ++ + GD Q+IY + GA + F +++ + Sbjct: 211 YILIDEYQDTNFVQYAISRLLAQKYK--NICVTGDPDQSIYGWRGADLRNIMDFEKDYPD 268 Query: 493 GERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDA---- 548 L+ YR I A+ IQ+N + +K + + +K T+ E++ Sbjct: 269 ARVVLLEQNYRSTKNILLAASSVIQKNKYRKQKEIWTENEHGEKIKTIHCENEHSEAEEI 328 Query: 549 --LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQA 602 + L G I + R + I G + Sbjct: 329 AKTIRALRGNGIKYTEIALFYRTNAQSRTLEIALRNAGIPYVIVG-------GVEF 377 Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 53/171 (30%), Gaps = 30/171 (17%) Query: 524 KKPLNSLTNGDKKAVTLL-----DESQLDALLDKLSGYAKPEERI---LILARYHHMRPA 575 +K L S+ + L + A +++L A + L + Sbjct: 472 EKTLKSIIDKTGYIHFLRKSEEKESEDRIANVEELVNAAHEYDANHTDGSLQGFLEEVAL 531 Query: 576 SLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVE 635 + + MT+H +KG + V I G++EG + E Sbjct: 532 ISDLDTVEDLAEAVTLMTLHTAKGLEFPVVFISGMEEGLLPHSESRISEEEIEEERR--- 588 Query: 636 DFPDAEERRLMYVALTRARHRVWALFNKENP----------SPFVEILKNL 676 L YV +TRA R++ + K S F++ + Sbjct: 589 ---------LCYVGITRAMKRLFLTYTKRRMRYGQLIPCVASRFLDEIHAD 630 >UniRef50_D1BXF2 ATP-dependent DNA helicase PcrA n=5 Tax=Actinomycetales RepID=D1BXF2_XYLCX Length = 896 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 98/518 (18%), Positives = 180/518 (34%), Gaps = 89/518 (17%) Query: 125 TSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEAMLTE 184 G + + LP R + ++ + A W++D SA Sbjct: 10 LPGFGAAVSDDSARLPSTAPRWDAWEEGKAA--GAPDWVRDAASAVGPRPDDDEAPRSGP 67 Query: 185 YADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQI 244 YA + LNP Q AV + LL++AGAGSGKT VL R +LLA G A +I Sbjct: 68 YAHLDPEALLDGLNPQQRAAVEHHGSPLLIVAGAGSGKTRVLTHRIAYLLATGRARAGEI 127 Query: 245 LLLAFGRKAAEEMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAA 302 L + F KAA EM ER+ + + TFH+ + I+++ K + + S AA Sbjct: 128 LAITFTNKAAAEMRERVEHLVGPAASRMWVSTFHSACVRILRREYKVLGLRSSFSIYDAA 187 Query: 303 RHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSL 362 + + ++ + + R L++R+ + Sbjct: 188 DSQRLVTLVTRELNLDP-------------------------KKYPARGLSNRISDLKNE 222 Query: 363 MRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVIL 422 + + ++ ++A + ++ L+ +A+DF +I + +L Sbjct: 223 LVTPEDYAEQ-------------GEKDPVLADVYTRYQARLQQASALDFDDIIMTTVHLL 269 Query: 423 EK-----GRFISPWKHILVDEFQDISPQRAALLAALRKQN-------------------- 457 + + ++H+LVDE+QD + + L+ L Sbjct: 270 QAFPNVAEHYRRRFRHVLVDEYQDTNHAQYVLVKELVGGVVSTGSTTGGGSTTGGGSTTG 329 Query: 458 ---------------SQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTY 502 L VGD Q+IY F GA + F +++ + L+ Y Sbjct: 330 GGSTAGGGSTAGGDLEPGELTVVGDADQSIYAFRGATIRNIQEFEQDYRDATTILLEQNY 389 Query: 503 RFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDA---LLDKLSGY--- 556 R I AN I +N + K L + + V + + + + +++ Sbjct: 390 RSTQTILSAANAVISRNADRKPKRLWTAAGAGARIVGYVADDEHQEARFVAEEIDRLGDS 449 Query: 557 -AKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 + I R + + E ++ T Sbjct: 450 DGVRPGDVAIFYRTNAQSRSLEEVLVRVGLPYKVVGGT 487 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 45/119 (37%), Gaps = 22/119 (18%) Query: 575 ASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPV 634 + + + + MT+H +KG + V + G+++G+ + + Sbjct: 659 DGEAEQEPKVDQGVVTLMTLHTAKGLEFPVVFLTGMEDGTFPHMRSLHDD---------- 708 Query: 635 EDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVARK 683 AEERRL YV +TRAR R++ PS F+ + RK Sbjct: 709 --AELAEERRLAYVGITRARERLYLSRAGMRSAWGMSNEMPPSRFLTDVPEDLWDWRRK 765 >UniRef50_Q1IVP8 ATP-dependent DNA helicase, Rep family n=2 Tax=Bacteria RepID=Q1IVP8_ACIBL Length = 849 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 86/417 (20%), Positives = 155/417 (37%), Gaps = 61/417 (14%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 LNP Q AV +L+LAGAGSGKT V+ R +L+ + SP+ IL + F KA Sbjct: 4 LEKLNPQQREAVETVHGPVLILAGAGSGKTRVITYRIAYLIEKVGVSPDSILAMTFTNKA 63 Query: 254 AEEMDERIRERLHTE---DITARTFHALALHIIQQGSKKV-----PIVSKLENDTAARHE 305 A EM ER+ + TFH+ + ++++ + + + + Sbjct: 64 AAEMQERVEHLVGGRTLAKPVISTFHSFCVRVLRRDIEALQINGKGYRKDFAIYDESDQQ 123 Query: 306 LFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRM 365 + K+ D + R + SR+ + + Sbjct: 124 SLVKSAMKRLGID-------------------------DKQLTVRNVLSRISHAKNHLLD 158 Query: 366 HGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-- 423 E +++ +A + K ++ L NA+DF L+ +L+ Sbjct: 159 P-----------QEVYLQSGDPKVERIAQIYKVYESELAKANALDFDDLLLMTNKLLKTS 207 Query: 424 ---KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQM 480 + R+ ++++L+DE+QD + + ++ AL + AVGD+ Q+IY + GA + Sbjct: 208 TEVRERYNRRFQYVLIDEYQDTNRPQYEIMRALAGTLH--NVCAVGDEDQSIYSWRGADI 265 Query: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL 540 F ++F E + L+ YR I E A+ ++ N + K L + G K Sbjct: 266 RNILEFEQDFPEAKIVRLEQNYRSTQNILEAASAVVKNNLKRKGKNLWTERMGGAKVGYY 325 Query: 541 LD----------ESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKL 587 ++ L +R +L R + E K Sbjct: 326 EAPDGENESLFVADYINKYLMIAHDEDDEPKRAAVLYRTNSQSRLFEEAMRRYGIKY 382 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 37/109 (33%), Gaps = 24/109 (22%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 Q+ MT+HA+KG + V IVG++EG EERRL Y Sbjct: 628 QVTLMTMHAAKGLEFPLVFIVGMEEGLFPSSRTLMNPD------------EVEEERRLCY 675 Query: 648 VALTRARHRVWALFNKENP------------SPFVEILKNLDVPVARKP 684 V +TRA + + S F+ + P Sbjct: 676 VGMTRAMRILVLSRARYRRRYGTDMPDASTASRFLSEVPPQLFEDIGSP 724 >UniRef50_C7HU69 ATP-dependent DNA helicase PcrA n=2 Tax=Anaerococcus RepID=C7HU69_9FIRM Length = 729 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 84/410 (20%), Positives = 158/410 (38%), Gaps = 51/410 (12%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 ++ S LN Q AV++ + LLV+AGAGSGKT VL +L+ +P IL + F Sbjct: 1 MDLSNLNDKQKEAVLHDKGPLLVVAGAGSGKTRVLTTSIAYLIKEKNVNPVNILAITFTN 60 Query: 252 KAAEEMDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIA 309 KAA EM ERI + L + + TFH++ I++ K+ + + + Sbjct: 61 KAANEMKERISDLLDEDVSHLWIGTFHSICARILRMNINKIGYDNNFTIYDTNDQKTLVK 120 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 E + + D+ + + + + Sbjct: 121 EIINDLN--------------------------YKDDISPKEALNLISYCKNKSISPKEF 154 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG---- 425 + F + + + K ++ N++DF LI + + + + Sbjct: 155 LN----------INTFYAKQEEYYNIYKNYEKKKFEYNSLDFDDLILKTLELFAEDSNTL 204 Query: 426 -RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 + ++++ VDE+QD + + L+ + K + + VGD Q+IY F GA ++ Sbjct: 205 KYYQDKFEYLFVDEYQDTNKSQYELIKFIGKGH--NNVRVVGDADQSIYSFRGADINNIL 262 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKA------V 538 F ++F + + L+ YR S I VAN+ I+ N + +K L + N + V Sbjct: 263 DFEKDFKDAKTIKLEENYRSTSNIINVANKLIKNNSERKEKNLWTSKNDGSEVLYKKSSV 322 Query: 539 TLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 + + ++ L + + IL R + E + Sbjct: 323 ESEEGKFVIDEINSLLNDGYRLKDMAILYRMNAQSRIFEEYLMKNLLDYK 372 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 54/164 (32%), Gaps = 32/164 (19%) Query: 538 VTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAA---------TRWPKLQ 588 + L+ES ++ + + T Sbjct: 488 IRALEESYSVENRSRIDNLNEFISSAAEYQSNNPEDNIHDYLENLSLLSDLDKTEDKDDS 547 Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 I MTIH++KG + +VG+ EG + E + EERR+ YV Sbjct: 548 ISLMTIHSAKGLEFKVCFVVGMDEGLFPSKRSIDEGNI-------------EEERRICYV 594 Query: 649 ALTRARHRVWALFNK----------ENPSPFVEILKNLDVPVAR 682 A+TRA +++ + PS F+ +++ + + Sbjct: 595 AITRAMEKLYLSSAEIRRQFGQPVYYKPSRFLNEVESSIKKIDQ 638 >UniRef50_A4XBE9 ATP-dependent DNA helicase PcrA n=18 Tax=Actinomycetales RepID=A4XBE9_SALTO Length = 795 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 86/415 (20%), Positives = 148/415 (35%), Gaps = 53/415 (12%) Query: 191 QVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFG 250 Q LN Q AV + LL++AGAGSGKT VL R +LLA + P +I+ + F Sbjct: 30 QALLDGLNGPQREAVTHAGSPLLIVAGAGSGKTRVLTHRIAYLLAARQVHPGEIIAITFT 89 Query: 251 RKAAEEMDERIRERLHTED--ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFI 308 KAA EM ER+ + + + TFH+ + I++ + + S A + Sbjct: 90 NKAAGEMKERVAQLVGPRARLMWVSTFHSACVRILRAEHEHAGLKSTFSIYDADDSRRLM 149 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 ++ R LA+++ + + Sbjct: 150 QLVARELDLDP-------------------------KRYPARGLAAQVSNLKNELVDPEE 184 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-- 426 A + +A ++ L+ +A+DF LI + +L+ Sbjct: 185 FAARAKGPNE-----------RALAEAYTLYQRRLREAHALDFDDLIMTTVHLLQSHPHV 233 Query: 427 ---FISPWKHILVDEFQDISPQRAALLAALRKQN---SQTTLFAVGDDWQAIYRFSGAQM 480 + ++H+LVDE+QD + + L+ L L VGD Q+IY F GA + Sbjct: 234 AETYRRRFRHVLVDEYQDTNHAQYVLIKELVSGTDGLDPAELCVVGDADQSIYAFRGATI 293 Query: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL 540 F +F + L+ YR I AN I +N + K L S V Sbjct: 294 RNILEFERDFTDARTILLEQNYRSTQTILNAANAVIDRNTSRKPKRLWSEAGTGDPIVGY 353 Query: 541 ---LDESQLDALLDKLSGYAKPEE----RILILARYHHMRPASLEKAATRWPKLQ 588 + ++ D + ++ + + + R + E + Sbjct: 354 VADTEHTEADWVAREIDRLVDDGDTRPGDVAVFYRTNAQSRVFEEVFIRVGLPYK 408 Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 52/150 (34%), Gaps = 22/150 (14%) Query: 543 ESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQA 602 + ++ L + L + + A A + + MT+H +KG + Sbjct: 549 AREYTERVEGLGEEGERATVAGFLEQVALVADADQLPADDPEHQGVVTLMTLHTAKGLEF 608 Query: 603 DYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFN 662 V + G+++G ++ EERRL YV +TRAR R++ Sbjct: 609 PVVFLTGMEDGVFPHARTF------------GDNHELEEERRLAYVGITRARQRLYLSRA 656 Query: 663 KEN----------PSPFVEILKNLDVPVAR 682 PS F+E L V R Sbjct: 657 VTRSAWGQPAYNAPSRFLEELPAELVRWER 686 >UniRef50_C8XDJ8 ATP-dependent DNA helicase PcrA n=2 Tax=Actinomycetales RepID=C8XDJ8_NAKMY Length = 864 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 94/432 (21%), Positives = 165/432 (38%), Gaps = 71/432 (16%) Query: 193 ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 LNP Q AV + LLV+AGAGSGKT VL R +LLA G A P +IL + F K Sbjct: 35 LLDGLNPPQREAVEHRGAPLLVVAGAGSGKTRVLTRRIAYLLAVGGAQPGEILAITFTNK 94 Query: 253 AAEEMDERIRERLHTED--ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 AA EM +R+ + + + TFH++ + I++ + ++ + + A + Sbjct: 95 AAREMKDRVTDLVGGRGRSMWVSTFHSMCVRILRAEATQIGLKTTFTIYDQADSQRLAQL 154 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 + + R LA+ + + + A Sbjct: 155 VAGGLNID-------------------------TKKYPARMLAASISNLKNELIDPETA- 188 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR---- 426 + S + L+A + + ++ L+A +A+DF LI Q + +L++ Sbjct: 189 ----------LERADSDQATLVAKVYQGYQERLRAASALDFDDLIMQTVFLLQRHPAVAE 238 Query: 427 -FISPWKHILVDEFQDISPQRAALLAALRKQN---------------------SQTTLFA 464 + ++H+LVDE+QD + + L+ AL L Sbjct: 239 HYRRRFRHVLVDEYQDTNHAQYLLVKALVGGTADEQEVRTADGELVRAAASEVPPAELVV 298 Query: 465 VGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLK 524 VGD Q+IY F GA + F ++ + L+ YR I AN I +NP + Sbjct: 299 VGDADQSIYAFRGATIRNIVEFERDYPNAQTIMLEQNYRSTQTILSAANSVIARNPQRRA 358 Query: 525 KPLNSLTNGDKKAVTLLDESQLDA------LLDKLSGYAK-PEERILILARYHHMRPASL 577 K L + G + + +++ D +D L + + + R + + Sbjct: 359 KNLWTAQGGGTRITGYVGDNEHDEAQFVGKEIDALVDAGEAVFGDVAVFYRTNSASRSLE 418 Query: 578 EKAATRWPKLQI 589 + +I Sbjct: 419 DVFIRNGMPYRI 430 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 47/129 (36%), Gaps = 22/129 (17%) Query: 564 LILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARE 623 L+LA + + + + + MT+H +KG + V + G ++G A + Sbjct: 622 LLLAVLEQLSLVADADSVPDSAEGMVTLMTLHTAKGLEFPVVFVTGWEDGIFPHQRALGD 681 Query: 624 SIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEIL 673 AEERRL YV +TRA R++ S F++ + Sbjct: 682 DS------------ELAEERRLAYVGITRAMKRLYVTRAMMRSAWGQPAANPASRFLDDI 729 Query: 674 KNLDVPVAR 682 + R Sbjct: 730 PAELIEWRR 738 >UniRef50_C4V2E0 ATP-dependent DNA helicase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V2E0_9FIRM Length = 746 Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 89/412 (21%), Positives = 153/412 (37%), Gaps = 54/412 (13%) Query: 193 ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 LN Q RAV + LL++AGAGSGKT VL R LL G P +IL + F K Sbjct: 3 LMQGLNEPQQRAVACLQGPLLIVAGAGSGKTRVLTFRIANLLEHG-VPPYRILAITFTNK 61 Query: 253 AAEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVP-IVSKLENDTAARHELFIA 309 AA EM ER+ + +D+ TFH+ +++ + AA + I Sbjct: 62 AAREMRERVDTLIGDAAQDVWLSTFHSFCARLLRMELEHYGRYAKNFVIYDAADSKGLIR 121 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 E K+ + + + + + + + Sbjct: 122 ECLKELNIDEKH-------------------------TAPGAVQAHISDAKNRLLDVAAF 156 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG---- 425 A+ + +A + ++ L+ NA+DF L+ + +L K Sbjct: 157 TAQA-----------TDFFAEQVAKIYALYQSKLQENNALDFDDLLMLTVELLTKNEELR 205 Query: 426 -RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 ++ +++ILVDE+QD + + A+ L ++ + VGD Q+IY + GA M Sbjct: 206 MKYQKKFQYILVDEYQDTNGAQYAITKLLAAEHR--NICVVGDADQSIYGWRGADMRNIM 263 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL---- 540 F +++ E L+ YR I AN I+ N + KK L + + Sbjct: 264 NFEQDYPEATVILLEQNYRSTKNILAAANAVIENNLTRKKKELWTDNPTGDRITIYEGAT 323 Query: 541 --LDESQLDALLDKLSGY-AKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + S + +++L I +L R + E + Sbjct: 324 EKNEASYIVREVERLHTMFHVKYGDIAVLYRTNAQSRNIEEAFYATGVPYAM 375 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 42/113 (37%), Gaps = 22/113 (19%) Query: 581 ATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDA 640 T + MT HA+KG + V + G++EG ++D Sbjct: 547 QTEQSDGTVTLMTFHAAKGLEFPAVFMAGMEEGLFPHSRTL------------LDDTEIE 594 Query: 641 EERRLMYVALTRARHRVWALFNKE----------NPSPFVEILKNLDVPVARK 683 EERR YV +TRA R++ + ++ PS F+ + V Sbjct: 595 EERRTCYVGITRAERRLYLTYARQRTIYGRTEMSRPSRFLAEIPEELVEHKEA 647 >UniRef50_A9H0P3 UvrD/REP helicase n=3 Tax=Alphaproteobacteria RepID=A9H0P3_9RHOB Length = 868 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 89/412 (21%), Positives = 149/412 (36%), Gaps = 49/412 (11%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 LNPAQ AV + +L+LAGAG+GKT L AR LL G A P ++L + F KA Sbjct: 28 LDGLNPAQREAVEQLDGPVLMLAGAGTGKTRALTARIVHLLNTGRARPNEVLAVTFTNKA 87 Query: 254 AEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 A EM R+ L TFHA+ + ++++ ++ V + S + + Sbjct: 88 AREMKNRVGAMLGQPVEGMPWLGTFHAICVKLLRRHAELVGLKSNFTILDTDDQLRLLKQ 147 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 + D R+LAS +D W + Sbjct: 148 LV-------------------------SAESIDDKRWPARQLASIIDGWKNSAFTPEKVP 182 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG----- 425 L ++ L NAVDF L+ + I + Sbjct: 183 -----------TADAGAYNHKGVKLYAQYQRRLIELNAVDFGDLLLHMVTIFQTHDDVLK 231 Query: 426 RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 ++ + +ILVDE+QD + + L L + + VGDD Q+IY + GA++ Sbjct: 232 QYQRWFAYILVDEYQDTNVAQYLWLRLLAAGHK--NICCVGDDDQSIYGWRGAEVGNILR 289 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAV---TLLD 542 F ++F L+ YR I A+ I+ N G+L K L + + ++ Sbjct: 290 FEKDFPGAHVVRLEQNYRSTPHILAAASGVIEGNEGRLGKTLWTAADEGERIRLIGHWDG 349 Query: 543 ESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTI 594 E + + + + + + + E + +I Sbjct: 350 EEEARWIGEDIEALCDGSSYLAKRRQNSRSQQIMEEVKRLDNNDALLGLNSI 401 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 45/121 (37%), Gaps = 20/121 (16%) Query: 572 MRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALL 631 + + + ++ MT+HA+KG + V + G ++G + ES ++ Sbjct: 645 EHVSLIMDNESDDGGAKVSIMTLHAAKGLEFPMVFLPGWEDGLFPSQRSMDESGLKG--- 701 Query: 632 PPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVA 681 EERRL YV +TRA F PS F++ L V V Sbjct: 702 -------LEEERRLAYVGITRAEEVCTISFVSNRRVFGQWQNAMPSRFIDELPQAHVEVL 754 Query: 682 R 682 Sbjct: 755 T 755 >UniRef50_C7RHP9 UvrD/REP helicase n=3 Tax=Anaerococcus RepID=C7RHP9_ANAPD Length = 731 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 85/410 (20%), Positives = 151/410 (36%), Gaps = 51/410 (12%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 + LN Q +AV++ E LLVLAGAGSGKT VL +L+ P I+ + F Sbjct: 1 MNLDGLNKMQRKAVLHDEGPLLVLAGAGSGKTRVLTTSIAYLIEEKNIDPRNIIAITFTN 60 Query: 252 KAAEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIA 309 KAA EM ERI + L + TFH++ I++ K+ + + I Sbjct: 61 KAANEMKERISKLLGMDVSHLWIGTFHSICARILRMNIDKIGYDRNFTIYDTSDQKTLIK 120 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 E + + D+ R + + + Sbjct: 121 EIINELG--------------------------YKDDIAPRDALNVISSAKN-------- 146 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR--- 426 + + + + + + + K ++ NA+DF LI + + + + + Sbjct: 147 --KSLDPDEFLKLNTYYSKGDIYYEIYKKYEEKKFYYNALDFDDLIDKVLYLFVRSKETL 204 Query: 427 --FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 + ++++ VDE+QD + + L+ + + VGD Q+IY F GA +S Sbjct: 205 DFYQKKFEYVFVDEYQDTNNSQYELIKYFAGFH--NNVTVVGDADQSIYSFRGANISNIL 262 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL---- 540 F ++F + E L+ YR I E AN I+ N + K L + G + + Sbjct: 263 NFEKDFKDAETIKLEQNYRSTKNILETANLLIENNSERKDKELWTENKGGDRVIYKANSV 322 Query: 541 --LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 + + + L + IL R + E + Sbjct: 323 ESEEAKFVLDNIKSLMQEGYDAKDFAILYRTNAQSRPFEEILMKNLLDYK 372 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 67/185 (36%), Gaps = 34/185 (18%) Query: 501 TYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPE 560 Y +I ++ + ++ K L S + + +A + + + + Sbjct: 471 NY----KIVDLIEDVLDKSG--YMKSLESSYSVEDRARIDNINEFISSASEYQENNPEDN 524 Query: 561 ERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAA 620 + Y + T I MT+HA+KG + V +VGL EG + Sbjct: 525 -----IYDYLENLSLLSDLDKTESTDNSISLMTMHAAKGLEFPVVFVVGLDEGLFPGKRS 579 Query: 621 ARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFV 670 ++ EERRL YVA+TRA+ +++ + PS F+ Sbjct: 580 I-------------DEGNIEEERRLFYVAITRAQEKLFLSSAEARRNYGKPVFYKPSRFI 626 Query: 671 EILKN 675 + + + Sbjct: 627 DEIID 631 >UniRef50_C7QGW9 ATP-dependent DNA helicase PcrA n=8 Tax=Bacteria RepID=C7QGW9_CATAD Length = 806 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 97/489 (19%), Positives = 169/489 (34%), Gaps = 84/489 (17%) Query: 133 RQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEAMLTEYADFFRQV 192 R LP P EE D RE W + A+ + Sbjct: 15 RHTDRTLPEPPAWAEESDAEREGWDG-----------WEEPEDAWVPPE----ESAAARK 59 Query: 193 ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 LN Q AV++ LL++AGAGSGKT VL R +L+ A P IL + F K Sbjct: 60 LLDGLNEPQREAVLHAGGPLLIIAGAGSGKTRVLAHRIAYLVGERHAHPGSILAITFTNK 119 Query: 253 AAEEMDERIRERLHTED--ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 AA EM +R+ E + + TFH+ + I++ +K + S A + + Sbjct: 120 AAAEMRQRVEELVGPRARLMWVSTFHSACVRILRAQAKTAGLPSNFSIYDTADSQRLMTM 179 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 + + R + ++ + + + H Sbjct: 180 VLRDLEIDP-------------------------KKTTPRSMLGQISKLKNELVDHDTFS 214 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KG 425 + A + +A + + + L A A+DF +I + +L+ Sbjct: 215 SRAQTEAERQ-----------LAQVYRLYADRLTAAKALDFDDIIMTTVHLLQAFPMIAE 263 Query: 426 RFISPWKHILVDEFQDISPQRAALLAALRKQN-------------------SQTTLFAVG 466 + +++ILVDE+QD + + L+ L Q+ L VG Sbjct: 264 HYRRRFRNILVDEYQDTNTAQYQLVKELVGQHEKRTVDGDLVRPGLNTEDLPPAELCVVG 323 Query: 467 DDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKP 526 D Q+IY F GA + F ++ + + L+ YR I AN I+ N G+ K Sbjct: 324 DADQSIYAFRGATIRNIIEFERDYPDAKVIKLEQNYRSTQTILTAANAVIENNKGRRAKN 383 Query: 527 LNSLTNGDKKA---VTLLDESQLDALLDKLSGYAK----PEERILILARYHHMRPASLEK 579 L + + K V + S+ + +++ + + + R + E Sbjct: 384 LWTDSGDGKLITGYVADDEHSEAQFVAEEIDRLSDAKETTYGGVAVFYRTNAQSRVFEEV 443 Query: 580 AATRWPKLQ 588 + Sbjct: 444 FVRVGLPYR 452 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 22/115 (19%) Query: 578 EKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDF 637 + + + MT+H++KG + V + G+++G + + Sbjct: 620 QIPDGEDHEGMVTLMTLHSAKGLEFPVVFLTGMEDGVFPHMRSM------------GDKK 667 Query: 638 PDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVAR 682 EERRL YV +TRAR +++ + PS F+ + V R Sbjct: 668 EMEEERRLAYVGITRAREQLYVSRSVYRSAWGAPQYNPPSKFLGEIPEPLVEWER 722 >UniRef50_C9LR66 ATP-dependent DNA helicase PcrA n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR66_9FIRM Length = 746 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 88/414 (21%), Positives = 159/414 (38%), Gaps = 52/414 (12%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 LN Q +AV E +L++AGAGSGKT L R ++L +G P+ IL + F KA Sbjct: 14 LDTLNERQRQAVEQIEGPVLIMAGAGSGKTKALTCRIAYMLEQG-IRPQNILAITFTNKA 72 Query: 254 AEEMDERIRERLHTE--DITARTFHALALHIIQQGSKKVP-IVSKLENDTAARHELFIAE 310 A+EM ER+ + E + TFH+ +++ P K + + I Sbjct: 73 AQEMRERVHHLVGAEADKLWMYTFHSFGARFLRREINNHPPFTDKFTIYDSDDSKQMIKN 132 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 K+ N D + R + +R+ + ++ + Sbjct: 133 ILKEL-------------------------NLDDKQYPPRNIQARISAAKNALQGPESFR 167 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG----R 426 AE + + +A + + +K NA+DF L+ +L R Sbjct: 168 AEASG----------NFYNEKIADVYDLYDKYMKQNNALDFDDLLFATTKLLADETIRRR 217 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + + +IL+DE+QD + + + + + + AVGD Q+IY + GA + F Sbjct: 218 WQDHFHYILIDEYQDTNHAQYLMAKYIAGK--SQNICAVGDADQSIYSWRGADLRNIMDF 275 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL------ 540 E++ + L+ YR I AN I+ N +L+K L + N Sbjct: 276 REDYPSAQIIKLEQNYRSTQTILNAANAVIKNNVERLEKRLWTENNPGVHLQKYAASDEH 335 Query: 541 -LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 + +++++ + P ++ +L R + E R + T Sbjct: 336 NEADFIVESMMKEHGENHVPYGKMAVLYRMNAQSRVIEESMVKRGIAYTMVGGT 389 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 45/111 (40%), Gaps = 22/111 (19%) Query: 582 TRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAE 641 ++ MTIH++KG + V + G+ EG + +++ E Sbjct: 552 FEEQDDKVTLMTIHSAKGLEFPIVYMAGMDEGIFP------------GVRSLMDETALEE 599 Query: 642 ERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVAR 682 ERRL YVA+TRA+ +++ + S F++ + + R Sbjct: 600 ERRLCYVAITRAKEKLYLTTSAVRTMYGQVKPYVESRFLKEIPVDLLDEIR 650 >UniRef50_UPI00016C5306 ATP-dependent DNA helicase n=2 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C5306 Length = 755 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 82/418 (19%), Positives = 154/418 (36%), Gaps = 44/418 (10%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 + L P Q AV++GE LL+LAGAGSGKT V+ R +LL G IL + F Sbjct: 4 DADLLADLTPDQRAAVMHGEGPLLILAGAGSGKTRVITRRVAYLLRAG-VRAHNILAITF 62 Query: 250 GRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIA 309 KAA EM R+ + + TFH+L +++Q ++++ + Sbjct: 63 TNKAAGEMKNRVEKLAPGNRVWVSTFHSLGARLLRQYAERLGFDRNFTIYDTDDRNKLVK 122 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 + + + R+A + + + + Sbjct: 123 DALEAAGIDNV-------------------------KFTPERIAGAISKAKNQLVTP--- 154 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFIS 429 P+ R K +A + ++ L++ NA+DF L++ + L++ + Sbjct: 155 --------PQYERTATDFFQKTVAAVYPRYEKRLRSANAMDFDDLLYLPAMALKQNEELR 206 Query: 430 -----PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 +++I++DE+QD + + ++ L N + VGD Q+IY++ G+ + + Sbjct: 207 AELDSRFRYIMIDEYQDTNSAQYQIVKQLSINNP--NVCVVGDPDQSIYKWRGSDIKIIL 264 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDES 544 F +F L YR I A+ I N + KK L + + + ++ Sbjct: 265 DFERDFPNARTITLAQNYRSTKSIIRAASVLIDHNKQRKKKDLVTDNPQGEPVNVITFDN 324 Query: 545 QLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQA 602 LD + + + R H + + + KG Sbjct: 325 GLDEAEGVVVRIKEAVKAGTFKYRDHAIFMRINALTRSLESAFVKHGVPFQIVKGLAF 382 Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 37/104 (35%), Gaps = 22/104 (21%) Query: 583 RWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEE 642 + MT+HASKG + V I+ +++G + EE Sbjct: 544 DEQADHVSVMTLHASKGLEFPAVYILAVEQGLLPHERSLANDE------------EIEEE 591 Query: 643 RRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNL 676 RRL +V +TRA ++ + S F++ L Sbjct: 592 RRLCFVGMTRAMKELYLCHARMREFRGQLNYCIVSQFIQELPRD 635 >UniRef50_B5K795 UvrD/REP helicase n=5 Tax=Rhodobacterales RepID=B5K795_9RHOB Length = 837 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 107/479 (22%), Positives = 181/479 (37%), Gaps = 73/479 (15%) Query: 179 EAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGE 238 AM + D+F LNPAQ +AV +L+LAGAG+GKT L R L+A G Sbjct: 27 RAMAPPHVDYFE-----GLNPAQRQAVETLNGPVLMLAGAGTGKTKALTCRIAHLMATGG 81 Query: 239 ASPEQILLLAFGRKAAEEMDERIRERLHT--EDI-TARTFHALALHIIQQGSKKVPIVSK 295 A P++IL + F KAA EM RI + + TFHA+ + ++++ ++ V + S Sbjct: 82 ARPDEILAVTFTNKAAREMMNRIGGLTQGASDGMRWLGTFHAICVKLLRRHAELVGLKSN 141 Query: 296 LENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASR 355 + + + S + R LA Sbjct: 142 FTILDTDDQLRLLKQLIRASSIDE-------------------------KRWPPRMLAGI 176 Query: 356 LDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLI 415 +D W + ++ ++ D L A++ LK NA DF L+ Sbjct: 177 IDGWKNKAWTPAQVPVGESSAYDDKGID-----------LYAAYQHRLKELNACDFGDLL 225 Query: 416 HQAIVILEKGR-----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQ 470 + I + + +K+ILVDE+QD + + L L + + + VGDD Q Sbjct: 226 LHMVTIFQTHADILATYQRWFKYILVDEYQDTNVAQYLWLRLLAQGHK--NICCVGDDDQ 283 Query: 471 AIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSL 530 +IY + GA++ F ++F L+ YR I A I N +L K L + Sbjct: 284 SIYGWRGAEVGNILLFEKDFPGAHVVRLEQNYRSTGHILGAAAGVIDANKDRLGKTLFTD 343 Query: 531 TNGDKKAVTL------LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRW 584 +K + + + ++ + + + + + A L +A+ + Sbjct: 344 GEDGEKVRLIGHWDGEEEARWIGEDIESMQRGTRGLDAMPL------NSMAILVRASHQM 397 Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEER 643 + F+TI G ++G G + M L +D A ER Sbjct: 398 RSFEDRFLTI----GLPYR---VIG---GPRFYERMEIRDAMAYFRLAVSQDDDLAFER 446 Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 46/123 (37%), Gaps = 20/123 (16%) Query: 572 MRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALL 631 + + A ++ MT+H +KG + V + G ++G + ES ++ Sbjct: 600 EHISLIMDNAKDEEDDKVTIMTLHGAKGLEFPSVYLPGWEDGLFPSQRSMDESGLKG--- 656 Query: 632 PPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVA 681 EERRL YV +TRA F PS F++ L +V V Sbjct: 657 -------LEEERRLAYVGITRAEKHCTISFTSSRLVYGQWQSQMPSRFIDELPEENVEVL 709 Query: 682 RKP 684 P Sbjct: 710 TPP 712 >UniRef50_C1F7R1 ATP-dependent DNA helicase, UvrD/REP family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7R1_ACIC5 Length = 943 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 80/386 (20%), Positives = 152/386 (39%), Gaps = 51/386 (13%) Query: 191 QVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFG 250 Q LNP Q V N + +L+LAGAGSGKT V+ R +L+ +P+ IL + F Sbjct: 2 QQLLDKLNPQQRAGVENVDGPVLILAGAGSGKTRVITHRIAYLIQERGVAPDSILAVTFT 61 Query: 251 RKAAEEMDERIRERLHTE---DITARTFHALALHIIQQGSKKV-----PIVSKLENDTAA 302 KAA+EM ER+ + TFH+ + ++++ + + + + Sbjct: 62 NKAAKEMAERVDALIGHSTLAKPVLATFHSFCVRMLRRDIEALRIGNEGLTKTFAIYDES 121 Query: 303 RHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSL 362 + + + ++ D + R + S++ + Sbjct: 122 DQQSLVKQIMRRMGLD-------------------------DKQLTPRVVLSKISWAKNH 156 Query: 363 MRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVIL 422 M E + +A + +A++ L+ NA+DF L+ +A+ +L Sbjct: 157 MIDP-----------QEYYLQSSDPVAERVAHIFEAYRKDLRKNNALDFDDLLLEAVRLL 205 Query: 423 E-----KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSG 477 + + R+ ++++L+DE+QD + + L+ L S+ + VGD+ Q+IY + G Sbjct: 206 KSSAEVRERYNRRYQYLLIDEYQDTNRPQYELMKLLA--GSRHNVCVVGDEDQSIYSWRG 263 Query: 478 AQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKA 537 A + F ++F + L+ YR I E A + +N + K L + G Sbjct: 264 ADIRNILEFEKDFPNAQTIRLEQNYRSTQVILEAAGAVVSRNEQRKGKSLWTSREGGSLI 323 Query: 538 VTLLDESQLDALLDKLSGYAKPEERI 563 + L K + Sbjct: 324 GFYEAPDGENEALFIADSIQKYLRKA 349 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 49/146 (33%), Gaps = 24/146 (16%) Query: 541 LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQ 600 + L +L+ A+ + A + ++ MT+HA+KG Sbjct: 641 PEAFSRIENLKELANAAQDAQERGETLNEFLDHAALVSDTDQFDADARVTLMTLHAAKGL 700 Query: 601 QADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWAL 660 + V++ G++EG + EERRL YV LTRA + Sbjct: 701 EFPMVVLAGMEEGLFPHSRTLTDPN------------QMEEERRLCYVGLTRAMDSLILT 748 Query: 661 FNKEN------------PSPFVEILK 674 + PS F+E + Sbjct: 749 RARYRRRYGNDMPEASTPSRFLEEIP 774 >UniRef50_A5UP48 DNA helicase, UvrD/REP helicase family n=2 Tax=Methanobrevibacter smithii RepID=A5UP48_METS3 Length = 610 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 128/579 (22%), Positives = 243/579 (41%), Gaps = 29/579 (5%) Query: 124 QTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEAMLT 183 + + ++ + P+ ++ E + + T L Sbjct: 30 EVKKTPRPEKKKTNKKPVIETFTKDIKTEPEKIASKNGKYLKKDYKSIDDLDDKTRQELL 89 Query: 184 EYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQ 243 FF+ V S PL+ Q A V ++ ++AGAG+GKT L+A+ +L+A+ PE Sbjct: 90 ANDKFFKTVNSKPLDTQQKIACVLDSKNVQIIAGAGTGKTFTLIAKIKYLIAKKHVRPED 149 Query: 244 ILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAAR 303 IL L+F + ++ ++ E++ RTFH+L +I+Q K I + Sbjct: 150 ILCLSFSNTSVRDLKGKL-----PENVEIRTFHSLGRSVIKQHHKVSVIENNEILAIIND 204 Query: 304 HELFI-AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSL 362 + + K E + N + + L +++L Sbjct: 205 YLANANTDTLKDILEFCDSYFLNIESYIIRRNDRKELLNELKEAFTKVAFKPLLADFINL 264 Query: 363 MRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVIL 422 + + + +K+ ++ L +DF+ +I+++ ++ Sbjct: 265 FKGNNFTKDYFSYFRSSNDDKDHDIFLKIAEDFYSYYQKYLDMHQQIDFNDMINESSKLI 324 Query: 423 EKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 +K +++ILVDE+QD + L+ +L + + L VGDDWQ+IY F G + Sbjct: 325 KKYGLKKHYRYILVDEYQDTTYTNYNLIKSL-QDKTDAHLTVVGDDWQSIYGFRGTNIEF 383 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD 542 + F E F +R ++ TYR + ++A FI +NP Q++K L S N K + Sbjct: 384 FSHFEEYFENPQRIFIEKTYRNPQELIDIAGSFIMKNPKQIRKSLKSPKNLKKPVKIIYP 443 Query: 543 E----SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAA----------------- 581 + + + + + + +K E +LIL R ++ ++ Sbjct: 444 QKNPIEKREMIYNLIKDLSKKSEDVLILGRTNNNINQFIKHRNLVKKGNLKKDKFLRILD 503 Query: 582 -TRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDA 640 T + + T+H+SKG +AD VII+ + + GFP+ + + + D+ + Sbjct: 504 KTDKSMNNVYYRTLHSSKGLEADNVIIINMVDDYLGFPSKLKTHSVLNYVNTKNYDYKYS 563 Query: 641 EERRLMYVALTRARHRVWALFNKENPSPFVEILKNLDVP 679 EERRL YV LTR+++ V+ + +K NPS F+E L + + Sbjct: 564 EERRLFYVGLTRSKNNVYLISDKNNPSEFIEELIDDSLE 602 >UniRef50_C1SJ11 DNA/RNA helicase, superfamily I n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJ11_9BACT Length = 703 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 88/412 (21%), Positives = 150/412 (36%), Gaps = 54/412 (13%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 LN AQ AV E LLVLAGAG+GKT V+ R L+ IL + F KA Sbjct: 5 KDELNKAQYEAVTTTEGPLLVLAGAGTGKTRVITYRIAHLINNMRVPSRNILAVTFTNKA 64 Query: 254 AEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 A EM ERI + + DI TFH++ L ++++ +K + I + Sbjct: 65 AGEMKERILKLVDYEDADIWIGTFHSICLRLLRRDPEKAGLEPGFGILDQDDRLATIRDI 124 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 K + + ++ + + + + G + Sbjct: 125 IKNLNID-------------------------HKKYPPKKYMNTISTYKNTRPYVDGKKP 159 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR----- 426 E + + + A + A++ LK + VDF ++ I + + Sbjct: 160 E--------------ELLHMFADVFAAYQQRLKDQKLVDFDDMLALTIRMFKNHPDTVGY 205 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + +++ILVDE+QD + + L L + L VGDD Q+IY + GA + F Sbjct: 206 YKELFRYILVDEYQDTNDIQFLFLHLLAGLDG--NLCVVGDDDQSIYGWRGADIRNILEF 263 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL----- 541 F + L YR +I + AN+ I+ N + K L + + L Sbjct: 264 DTIFKGTKIIRLLENYRSRPQILQAANKLIRNNKLRKGKDLVAARDEGGLVQVLPVSRET 323 Query: 542 -DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFM 592 + + ++K I IL R + + ++ Sbjct: 324 DEAEFVIDQVNKYLEEGVKGSEIAILYRTNGQSRNFEVLLNRQGVAYKVIGS 375 Score = 98.5 bits (244), Expect = 7e-19, Method: Composition-based stats. Identities = 32/212 (15%), Positives = 64/212 (30%), Gaps = 47/212 (22%) Query: 476 SGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDK 535 GAQ + + F E + ++ K + +T+ Sbjct: 445 RGAQKESFRGYLKIFNE----------------LAACLKV-----SEMVKTVMDMTDYSG 483 Query: 536 KAVTLLDESQLDALLDKLSGYAK----PEERILILARYHHMRPASLEKAATRWPKLQIDF 591 DE + + + + E + ++ ++ + Sbjct: 484 YVKRYEDEQEAERRISNIEELYNAAVSFENSNSDAMITDFLAATAIATSSDEPADSCVQL 543 Query: 592 MTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALT 651 MTIH++KG + + V + GL+ G + E E RRL YV +T Sbjct: 544 MTIHSAKGLEFESVFLTGLENGLFPLHGSLEEPDELEEE------------RRLCYVGVT 591 Query: 652 RARHRVWALFNKENP----------SPFVEIL 673 RA+ + + S F++ + Sbjct: 592 RAKQNLHMTYASTRMVYGKYMPQSRSVFLDEM 623 >UniRef50_C5NYN7 ATP-dependent helicase PcrA n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYN7_9BACL Length = 727 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 89/407 (21%), Positives = 160/407 (39%), Gaps = 51/407 (12%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 +N Q +A++ E +++V+AGAGSGKT VL R +L++ IL + F KAA Sbjct: 5 QNMNDNQLKAILKTEGAVMVIAGAGSGKTRVLTNRIAYLISEKNILENNILAITFTNKAA 64 Query: 255 EEMDERIRERLHTED--ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 +EM ERI + I TFH++ + I++Q + + + + I Sbjct: 65 KEMKERIYALVGETSKYIWINTFHSMCVRILRQHIELLGYNKNFTILDTSEQKSIIKNIV 124 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 + + +D + + + + + + Sbjct: 125 RSL-------------------------DLSEDAYQPANVLKIISNAKNSLVSVKKMREQ 159 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----F 427 +K +A + ++ LK + +DF L+ + IV+ +K + Sbjct: 160 -----------SRFGFMKNVAEIYAHYQSYLKKNSVLDFDDLMLKTIVLFKKFPEVLAIY 208 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + +++I VDE+QD + + L+ L + + VGDD Q+IY + GA F Sbjct: 209 QNQFQYIHVDEYQDTNVIQYRLIKMLSAVHK--NVCVVGDDDQSIYSWRGACSDNIINFE 266 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLD 547 ++F + E LD YR NS I + AN I+ N + +K L S G K + D Sbjct: 267 KDFDDVELVFLDQNYRSNSTILDAANAVIKNNTDRKEKELWSENKGGGKISVYAASNDKD 326 Query: 548 ALLD------KLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 D +L + I IL R +++ + + Sbjct: 327 ETDDIAKKILELKKEGIDYKDIAILYRANYLSRQMENSCLSFGIPYK 373 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 52/145 (35%), Gaps = 18/145 (12%) Query: 543 ESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQA 602 + +L AK + + + + + T+HASKG + Sbjct: 498 AESRIENISELVSSAKQFSSMNDSLIDFISEMSLTSDSDDENQEDAVVLSTVHASKGLEY 557 Query: 603 DYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFN 662 V I+GL+E + +A E EERRL YVA+TRA+ R++ + Sbjct: 558 KVVFIMGLEENLFP--------SIRDAESSADEKNKMEEERRLAYVAITRAKERLFMSYA 609 Query: 663 KENP----------SPFVEILKNLD 677 S F++ + N Sbjct: 610 NRRMQFGSIKMNKRSRFLDEVPNKL 634 >UniRef50_Q029V8 ATP-dependent DNA helicase, Rep family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q029V8_SOLUE Length = 788 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 84/413 (20%), Positives = 156/413 (37%), Gaps = 56/413 (13%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 LN Q AV + + LL+LAGAGSGKT V+ R ++ P +L + F KA Sbjct: 4 LKGLNAQQREAVTHIDGPLLILAGAGSGKTRVITHRIAHIITSRHVPPSAVLAVTFTNKA 63 Query: 254 AEEMDERIRERLH----TEDITARTFHALALHIIQQGSKKV-----PIVSKLENDTAARH 304 A+EM ER+ L T TFH+ + ++++ + + Sbjct: 64 AKEMRERVAALLEDVPLDSMPTVSTFHSFCVRLLRRDGDPLARVRPGFTRRFTIYDDEDQ 123 Query: 305 ELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMR 364 I + + + + R SR+ + Sbjct: 124 LQIIKAAYRTLGFDEKEFMQY------------------------RAALSRISHAKNTKV 159 Query: 365 MHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE- 423 E RD +K + +A L + ++ AL+ NA+DF L+ +A+ +L Sbjct: 160 TP-----------QEMFRDAVNKESEAVAALYEEYEKALRNANALDFDDLLLEAVRLLRT 208 Query: 424 ----KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQ 479 + + ++++DE+QD + + L+ L +Q+ + VGD+ Q+IY + GA Sbjct: 209 DDATRESWNRRLSYVMIDEYQDTNRSQYELMRLLTEQH--QNVCVVGDEDQSIYSWRGAD 266 Query: 480 MSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVT 539 + F +++ + L+ YR I A ++ N + K L + ++ + Sbjct: 267 IKNILDFEKDYPRAKTIRLEQNYRSTKNILAAAGAVVENNKARKGKKLWTESDSGELLGL 326 Query: 540 L-----LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKL 587 +E+ A + + P + + IL R + E K Sbjct: 327 YAGYDSENEALFIADTTEKYLASNPGDHVAILYRTNSQSRQIEEALRRYGRKY 379 Score = 89.3 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 24/178 (13%), Positives = 52/178 (29%), Gaps = 34/178 (19%) Query: 515 FIQQNPGQ--LKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHM 572 I+ + +K L + + + ++A D + + Sbjct: 485 LIRHILERTGYRKMLQQEKTPESETRLENLDELINAAADAHERGETLGDFL--------D 536 Query: 573 RPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLP 632 A + + + + MT+H +KG + V + G++ G + E Sbjct: 537 NAALVADVDSYDEQSPVTLMTLHNAKGLEFPLVFLSGMELGLFPHSRSMNSEEALEEERR 596 Query: 633 PVEDFPDAEERRLMYVALTRARHRVWALFNKENP------------SPFVEILKNLDV 678 YV +TRAR ++ + K S F+ + + Sbjct: 597 L------------CYVGMTRARKKLVLTWAKMRRRFGGGEQERSTASWFLSEVPENLI 642 >UniRef50_B3EU74 UvrD/REP helicase n=4 Tax=Bacteroidetes RepID=B3EU74_AMOA5 Length = 757 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 87/411 (21%), Positives = 157/411 (38%), Gaps = 46/411 (11%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q +A VN E +++AGAG+GKT VL R +L+ + P +IL L F KAA E Sbjct: 8 LNEQQRQAAVNTEGPCMIIAGAGAGKTKVLTTRIAYLIQEKKVDPFKILALTFTNKAANE 67 Query: 257 MDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M +RI + + +++ TFH+ +++ + K+ S + + K+ Sbjct: 68 MKKRIEQVIGPAAKNVWLGTFHSCFAKLLRIEADKIGYPSSFSIYDTTDSKSLLKSIIKE 127 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 N D + SR+ + + A+ Sbjct: 128 -------------------------MNLDDKTYTPNTVLSRISSAKNRLIT-----AQEY 157 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RFIS 429 + P +D + + + A+DF ++ ++L + ++ Sbjct: 158 INNPIYQQDDEEAMKPKVGEIYVQYAKRCLQAGAMDFDDILLNTYLLLNQHLDILYKYQE 217 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 +++IL+DEFQD + + A++ L + + VGDD Q+IY F GA + F ++ Sbjct: 218 RFQYILIDEFQDTNLAQYAIVKDLAGIHK--NICVVGDDAQSIYAFRGANIRNILNFEKD 275 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDA- 548 + L+ YR I E AN I+ N QLKK + + + + + + Sbjct: 276 YPNLTIIKLEQNYRSTQNIVEAANGIIRNNQLQLKKNVWTANEKGEVIGLIRATTDAEEG 335 Query: 549 ------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 + + E IL R + A E ++ T Sbjct: 336 RLVAASIFEIKMQNQLRNEDFAILYRTNSQSRAIEEALRKINLPYRMLGGT 386 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 22/119 (18%) Query: 566 LARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESI 625 LA + + + +I MTIHA+KG + YV IVG++E FP++ Sbjct: 534 LATFLQDVALATNNENEEDGEDKISLMTIHAAKGLEFKYVYIVGIEEDL--FPSSMMLGS 591 Query: 626 MEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFN----------KENPSPFVEILK 674 E+ EERRL YVALTRA+ +V+ + + S F+ + Sbjct: 592 RED----------LEEERRLFYVALTRAQKKVFLSYTISRYRFGKLKQCEVSRFIGEID 640 >UniRef50_B0RZV9 ATP-dependent DNA helicase n=2 Tax=Finegoldia magna RepID=B0RZV9_FINM2 Length = 725 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 88/410 (21%), Positives = 157/410 (38%), Gaps = 50/410 (12%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 + LN Q AV N + +L+LAGAGSGKT VL + + L +G S +IL + F Sbjct: 2 MNLDNLNDRQREAVENTDGPMLILAGAGSGKTKVLTTKIAYCLEKGLCSKYEILAITFTN 61 Query: 252 KAAEEMDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIA 309 KAA+EM ER+ L + + + TFHA+ I++ +++ A + Sbjct: 62 KAAKEMKERVENILQENVDSMWIGTFHAICSRILRVEIERIGFERNFTVYDRADQISLVK 121 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 E K + + + + R + Sbjct: 122 ECLKDMGVDPKNVE-------------------------IKNEINTISRLKNAGATEKNI 156 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR--- 426 E + L + ++ LK N++DF LI + ++ E+ Sbjct: 157 DKEDFDISLSTFT----------MELFQKYEHKLKRYNSLDFDDLIVKTNLLFEENPDLR 206 Query: 427 --FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 + +K++ VDE+QD + + L+ L +N + VGD Q+IY + GA + Sbjct: 207 EKYSDRFKYVFVDEYQDTNDTQYKLIKNLVSKND--NICCVGDSDQSIYGWRGANIQNIQ 264 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVT----- 539 F ++F + L+ YR I ++AN I+ N + K L + N + Sbjct: 265 NFEKDFKNAKVILLEQNYRSTQPILDLANTVIKNNSLRKDKNLWTAKNEGDMPIYRRMYS 324 Query: 540 -LLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 + + Q+ +++ P E + IL R + E+ + Sbjct: 325 DIDEADQVVQWIEQERYRENPYEEMAILYRTNAQSRLFEERLNRLGIPNR 374 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 47/121 (38%), Gaps = 26/121 (21%) Query: 566 LARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESI 625 L Y + T + MTIHA+KG + D V GL+EG+ Sbjct: 524 LREYLETSSLMTDLDKTDDNTKGVSMMTIHAAKGLEFDVVFFTGLEEGTIP--------- 574 Query: 626 MEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKN 675 D EERRL YVA+TRAR +++ + S F+E ++N Sbjct: 575 -------SRVDEDVEEERRLCYVAITRARKKLYITSVQSRRRFNEFQTKAESRFIEEMEN 627 Query: 676 L 676 Sbjct: 628 K 628 >UniRef50_Q9CD72 ATP-dependent DNA helicase pcrA n=26 Tax=Actinomycetales RepID=PCRA_MYCLE Length = 778 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 89/420 (21%), Positives = 164/420 (39%), Gaps = 57/420 (13%) Query: 193 ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 LNP Q +AVV+ LL++AGAGSGKT+VL R +L+A QIL + F K Sbjct: 17 LLDGLNPQQRQAVVHEGSPLLIVAGAGSGKTTVLARRIAYLIAARSVGVSQILAITFTNK 76 Query: 253 AAEEMDERIRERLHT---EDITARTFHALALHIIQQGSKKVP-IVSKLENDTAARHELFI 308 AA EM ER+ + + TFH+ + I++ + + + S + Sbjct: 77 AAAEMRERVARLVGDHTGPSMWVSTFHSTCVRILRNQASLIGGLNSNFSIYDVDDSRSLL 136 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 + + R +A+ + + + Sbjct: 137 QMIGQDMGLDIKRYS-------------------------PRLMANAISNLKNELIDAES 171 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK---- 424 A A + + + +A + ++ L+ NA+DF LI + + IL+ Sbjct: 172 AVANLSSDT--------DDLARTVATVYGEYQRRLRTANALDFDDLIGETVGILQAFPQI 223 Query: 425 -GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTT--------LFAVGDDWQAIYRF 475 + ++H+LVDE+QD + + L+ L ++ + L VGD Q+IY F Sbjct: 224 AEHYRRRFRHVLVDEYQDTNHAQYVLVRELVGHGARNSPDDMPPGELCVVGDADQSIYAF 283 Query: 476 SGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDK 535 G+ +S F ++ + L+ YR I AN I +N G+ K L + + Sbjct: 284 RGSTISNIEDFERDYPDTTTILLEQNYRSTQNILSAANSVIARNFGRRDKRLWTDAGKGE 343 Query: 536 KAVTLLDESQLDA---LLDKLSGYA----KPEERILILARYHHMRPASLEKAATRWPKLQ 588 V + +++ D + D++ + + +L R +++ + E + Sbjct: 344 LIVGYVSDNEHDEAKFIADEIDALVGGGEITYDDVAVLYRANNLSRSLEEVFIPTGIPYK 403 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 45/134 (33%), Gaps = 22/134 (16%) Query: 560 EERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPA 619 + + A + S + MT+HA+KG + V + G ++G Sbjct: 571 PDTGALAAFLEKVSLMSDTDQIPENNSGVVTLMTLHAAKGLEFPVVFVTGWEDGMLPH-- 628 Query: 620 AARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPF 669 + + +EERRL YV +TRAR R++ S F Sbjct: 629 ----------MRTLGDPTELSEERRLAYVGITRARQRLYLSRAITRSSWGQPILNPESRF 678 Query: 670 VEILKNLDVPVARK 683 + + + R Sbjct: 679 LREIPPELIDWRRS 692 >UniRef50_D1CD72 UvrD/REP helicase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CD72_THET1 Length = 779 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 91/431 (21%), Positives = 169/431 (39%), Gaps = 58/431 (13%) Query: 182 LTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASP 241 ++ Y D + + LN Q AV + +LVLAG GSGKT VL R +LL++G SP Sbjct: 1 MSNYPDIYSSI-LEGLNDKQLEAVTAPDGPVLVLAGPGSGKTRVLTHRIAFLLSQG-VSP 58 Query: 242 EQILLLAFGRKAAEEMDERIRERLH-------TEDITARTFHALALHIIQQGSKKVPIVS 294 IL + F KAA EM ERI + +IT TFH++ ++++ + I Sbjct: 59 FNILAVTFTNKAAREMRERIERLVGGAFGSYEARNITMGTFHSICSRVLRRDGGAIGISP 118 Query: 295 KLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLAS 354 I + + + Q R + + Sbjct: 119 NFVIYDDDDQIRLIKQALNEIGLDEKQ-------------------------YAPRSIQA 153 Query: 355 RLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGL 414 R+ S + ++ ++ S ++ A + + ++ L+ AVDF L Sbjct: 154 RISSAKSALLDPEDYSSQGVS----------SYFDEIAARVYRRYQQLLEINQAVDFDDL 203 Query: 415 IHQAIVILEKGR-----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDW 469 + + +++ + + W+++LVDE+QD + + L+ L +++ +F VGD+ Sbjct: 204 LMKVVLLWKSYPDILQQYRDRWQYVLVDEYQDTNRAQYMLINLLTQEHR--NIFVVGDED 261 Query: 470 QAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS 529 Q IY + A + F ++ E + L+ YR I +VA+ I N + K L + Sbjct: 262 QGIYSWRAADIRNILNFERDYPEAKVILLEQNYRSYQEILDVASHIISSNRLRRPKKLWT 321 Query: 530 LTNG---DKKAVTLLDESQLDALLDKLSGYA----KPEERILILARYHHMRPASLEKAAT 582 +G + ++ + + ++S ++ R + E + Sbjct: 322 NKSGGALVRVREAYDEQDEASYIAREISRLTSLGEYTYSDFAVMYRTNSQSRPVEEAFSR 381 Query: 583 RWPKLQIDFMT 593 QI T Sbjct: 382 YRIPYQIIGGT 392 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 46/137 (33%), Gaps = 22/137 (16%) Query: 553 LSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQE 612 ++ + L + + + Q+ +T+HA+KG + V I+G +E Sbjct: 543 IAQDYAAIDTSEALVEFLQEVALQSDVDTMQNNGNQVTLITLHAAKGLEYKVVFIIGFEE 602 Query: 613 GSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN------- 665 G + EE RL YV +TRA +++ + Sbjct: 603 GLLPHARSMDRES------------DIEEECRLAYVGVTRAMEKLYISYAFHRNVFGATQ 650 Query: 666 ---PSPFVEILKNLDVP 679 PS F+ + + Sbjct: 651 TNVPSRFLANIPPDLLD 667 >UniRef50_B5YHS6 ATP-dependent DNA helicase PcrA n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YHS6_THEYD Length = 699 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 95/413 (23%), Positives = 156/413 (37%), Gaps = 53/413 (12%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 + LNPAQ AVV E LLVLAGAGSGKT V+ + +L P I + F Sbjct: 2 KDFPLRDLNPAQQEAVVYCEGPLLVLAGAGSGKTRVITYKYAYLTKSKGLLPSSIFTVTF 61 Query: 250 GRKAAEEMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 KAA+EM ERI + + ++ TFH+L + I++ + Sbjct: 62 TNKAADEMKERIFKMCNGNWKNTWIGTFHSLCVRILRAHIDNIGYKRDFIIYDDDDQAGL 121 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 I K + E L + + +++ S + Sbjct: 122 IKRILKDLNMH---------------------------EALCKCVVTKISNLKSNLITPE 154 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-- 425 + + + + + + ++ LK NA+DF LI I + + Sbjct: 155 DYISNIEG----------YEFEERLGRIYMRYQNELKRYNALDFDDLILCVIKLFNENED 204 Query: 426 ---RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 R+ +K+ILVDEFQD + + LL L + + + AVGDD Q+IY+F GA + Sbjct: 205 LLRRYSEQFKYILVDEFQDTNKSQYMLLQLLCRYHK--NICAVGDDDQSIYKFRGANIHN 262 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL- 541 F ++F + + L+ YR I ++ I +N + K L + + +K Sbjct: 263 ILNFEKDFPDTKIVKLEQNYRSTKHIILASSAMISRNTMRKPKILWTERDWGEKIFYCQL 322 Query: 542 --DESQLDALLDKLSGYA----KPEERILILARYHHMRPASLEKAATRWPKLQ 588 +E + + + + IL R A E Q Sbjct: 323 NNEEEEAKYIAKNIKELYLKGDYEYKDFAILYRLVLQARALEEALRMEGIPYQ 375 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 22/111 (19%) Query: 583 RWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEE 642 K + +T+HA+KG + V I G +EG + + F EE Sbjct: 530 ENKKNYVSLLTLHAAKGLEFPVVFIAGCEEGILPY------------FKALEDPFELQEE 577 Query: 643 RRLMYVALTRARHRVWALFNKENP----------SPFVEILKNLDVPVARK 683 RRL YV +TRA++ ++ K+ S F++ + RK Sbjct: 578 RRLFYVGMTRAKNLLFITSVKQRKLYSKVQKQETSSFIKDIPPEYCICIRK 628 >UniRef50_C1XMD9 ATP-dependent DNA helicase, Rep family n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XMD9_MEIRU Length = 706 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 95/406 (23%), Positives = 156/406 (38%), Gaps = 44/406 (10%) Query: 193 ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 S LNP+Q AV++ E LV+AGAGSGKT +V R +LL P +IL + F K Sbjct: 4 LLSSLNPSQQEAVLHFEGPALVVAGAGSGKTRTVVHRIAYLLRERRVYPAEILAVTFTNK 63 Query: 253 AAEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 AA EM ER+ + + D+ TFHA A+ I++ + V + + E Sbjct: 64 AAGEMKERLEKMVGRPARDLWVSTFHAAAVRILRTYGEYVGLRPGFVIYDEDDQNTLLKE 123 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 K+ + + ++ G Sbjct: 124 VLKELELEAKPGP--------------------------------FRAMIDRIKNRGAGL 151 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR---- 426 AE + AP+ I + A + + ++ L+ + A+DF+ L+ I + E+ Sbjct: 152 AEYMREAPDFIGGVPKD---AAAEVYRKYQSGLRMQGALDFNDLLLLTIELFEQHPEVLH 208 Query: 427 -FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 + I VDE+QD +P + L L + L VGD Q+IY F A ++ Sbjct: 209 KVQQRARFIHVDEYQDTNPVQYKLTRLLAGERP--NLMVVGDPDQSIYGFRSADINNILD 266 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQ 545 F +++ L+ YR +S I VAN I++N +L+K L G + + Sbjct: 267 FTKDYPGARVIRLEENYRSSSSILRVANAVIEKNALRLEKVLRPTRPGGEPVRLYRAPNA 326 Query: 546 LDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDF 591 + K I Y + L + R + + Sbjct: 327 REEAAFVAREIVKLGNFQQIAVLYRTNAQSRLLEEHLRRANVPVRL 372 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 62/176 (35%), Gaps = 30/176 (17%) Query: 514 RFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMR 573 R ++Q + + V L + D ++ + + + + A+ Sbjct: 475 RVLEQTGFREALKQEPDGEDRLQNVEELLRAAQDWEEEEGGSLSDFLDSVALTAKA---- 530 Query: 574 PASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPP 633 E+ P + MT+H +KG + V +VGL+E + Sbjct: 531 ----EEPQGDAPAEAVTLMTLHNAKGLEFPTVFLVGLEENLLPHRNSL------------ 574 Query: 634 VEDFPDAEERRLMYVALTRARHRVWALFNK----------ENPSPFVEILKNLDVP 679 EERRL YV +TRA+ R++ + + PS F+E + + Sbjct: 575 HRLEDLEEERRLFYVGITRAQERLYLSYAEERETYGKREYTRPSRFLEDIPQDLLK 630 >UniRef50_B9KXW3 ATP-dependent DNA helicase pcrA n=2 Tax=Thermomicrobia (class) RepID=B9KXW3_THERP Length = 771 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 91/417 (21%), Positives = 156/417 (37%), Gaps = 55/417 (13%) Query: 189 FRQVE--SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILL 246 F +E L+ Q AV E +LV+AG GSGKT VL R +L+ G A P QI+ Sbjct: 39 FSGMERILIGLDADQCVAVTTTEGPVLVVAGPGSGKTRVLTHRVAYLIGSGRARPWQIVA 98 Query: 247 LAFGRKAAEEMDERIRERLHTED---ITARTFHALALHIIQQGSKKVPIVSKLENDTAAR 303 + F KAA E+ ER+ L TE + A TFH+L + I+++ ++ + Sbjct: 99 VTFTNKAAREIRERLGGLLGTESAQLVQAGTFHSLCVRILRRDGYRIGLEPAFTIYDEED 158 Query: 304 HELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLM 363 + + + + R L RL R + Sbjct: 159 QLALVKQALRDLGLDPQRFS-------------------------PRMLLGRLSRAKNDQ 193 Query: 364 RMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE 423 Q+ S ++ A + + + L+ AVDF L+ + + + Sbjct: 194 HSPSDLQSMA-----------QSYWDEVAARVYERYAQYLQRAQAVDFDDLLLRTVELFT 242 Query: 424 KGR-----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGA 478 + + W+++ VDE+QD + + L+ L + L VGD Q+IY + A Sbjct: 243 EYPDVLAHYQDRWRYLQVDEYQDTNRLQYQLVRQLASGHR--NLCVVGDPDQSIYSWRQA 300 Query: 479 QMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKA- 537 + F +F + L YR +I A+ I+ N ++++PL + Sbjct: 301 DIRNILEFQRDFPDATVIRLGRNYRSTPQIVAAADAVIRVNRQRIERPLWTENPPGPPIR 360 Query: 538 -VTLLDESQLDALL-----DKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 + DE Q ++ + I +L R + + E R Q Sbjct: 361 LLACWDEQQEAEMVVSEIDRLVRTGNARYRDIAVLYRINAQSRSVEEALVRRQIPYQ 417 Score = 95.0 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 22/111 (19%) Query: 583 RWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEE 642 Q+ +T+HA+KG + V ++G++EG A E Sbjct: 593 EMSGDQVTLLTLHAAKGLEFPVVFLIGVEEGLLPHARALESEAELEEERRL--------- 643 Query: 643 RRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVARK 683 YV +TRA+ R++ + PS F++ L V + Sbjct: 644 ---FYVGITRAKERLYLSYCSSRNRFGLRERCLPSHFLDDLPPDVVEAGSR 691 >UniRef50_C8S459 UvrD/REP helicase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S459_9RHOB Length = 850 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 96/421 (22%), Positives = 163/421 (38%), Gaps = 55/421 (13%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 LNP Q AV+ + +L+LAGAG+GKT L AR LL G+A P +IL + F KA Sbjct: 29 LDDLNPEQRAAVLAPDGPVLMLAGAGTGKTKALTARIVHLLTTGKARPNEILAVTFTNKA 88 Query: 254 AEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 A EM +R+ L TFH++++ I+++ ++ V + S + + Sbjct: 89 AREMKDRVGRMLGQVEGMPWMGTFHSISVKILRRHAELVGLKSNFTILDTDDQIRLLKQL 148 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 N + R LA +D W + + Sbjct: 149 I-------------------------VAENIDEKRWPARLLAGLIDSWKNRAWTPAKVPS 183 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR----- 426 ++ L + ++ L+A NA DF L+ + I + Sbjct: 184 SEASAYNNRGT-----------ELYQMYQDRLRALNATDFGDLLLHVVTIFQTHPDVLAQ 232 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + +++ILVDE+QD + + L L + + + VGDD Q+IY + GA++ F Sbjct: 233 YQRWFRYILVDEYQDTNVAQYLWLRLLAQAHR--NICCVGDDDQSIYGWRGAEVGNILRF 290 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAV---TLLDE 543 ++F L+ YR I A+ I N G+L K L + +K E Sbjct: 291 EKDFPGAHVVRLEQNYRSTPHILAAASAVIAANKGRLGKTLWTEREAGEKVRLIGHWDGE 350 Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQAD 603 + + D+L + + + A L +A+ + + F+TI G Sbjct: 351 EEARWIGDELEALQRGTRAM---DPHSLDDMAILVRASHQMRAFEDRFLTI----GLPYR 403 Query: 604 Y 604 Sbjct: 404 V 404 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 47/123 (38%), Gaps = 20/123 (16%) Query: 572 MRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALL 631 + + + + ++ MT+HA+KG + V + G ++G + ES ++ Sbjct: 618 EHVSLIMENESEEAAEKVSIMTLHAAKGLEFPVVFLPGWEDGLFPSQRSMDESGLKG--- 674 Query: 632 PPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVA 681 EERRL YV +TRA F PS F++ L V V Sbjct: 675 -------VEEERRLAYVGITRAEALCTISFAANRRVYGQWQSALPSRFIDELPEAHVEVL 727 Query: 682 RKP 684 P Sbjct: 728 TPP 730 >UniRef50_B1GYW6 ATP-dependent UvrD family DNA helicase PcrA n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYW6_UNCTG Length = 772 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 79/414 (19%), Positives = 163/414 (39%), Gaps = 50/414 (12%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 +++ + LNP+QA AV+ E L++ AGAG+GKT V+ R +LL+ G S + +L + F Sbjct: 2 KEMLTKNLNPSQAEAVLCTEGPLIIFAGAGTGKTRVITHRIAYLLSLGVVS-QSVLAVTF 60 Query: 250 GRKAAEEMDERIRERLHTEDI--TARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 KAA EM +RI + + + TFH+ H ++ + ++ + + Sbjct: 61 TNKAASEMKKRISDLIPGVGVNVWVSTFHSFCAHFLRAEASRISLNPYFLIYDFIDQKSV 120 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 + + K+ + + + K +A ++ R ++ Sbjct: 121 VKDCVKELNIDEKKFK-------------------------LSIIADKISRAKDNLKFPS 155 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-- 425 AE +A + + ++ L+ +A+DF LI + + L++ Sbjct: 156 DMAAEA--------ESAGDFFGITVAKIYELYQKKLERADAMDFGDLIMRTVSALQRHSE 207 Query: 426 ---RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + +K+I+VDE+QD + + + L + + VGDD Q++Y + GA ++ Sbjct: 208 LLEYYREKYKYIMVDEYQDTNHAQYIFIKLLAGKYH--NVCVVGDDDQSVYSWRGADINN 265 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD 542 F +++ + L+ YR +I AN+ ++ N ++ K L + + L Sbjct: 266 ILDFEKDYPNAKSVKLEQNYRSTPKILSTANQVVKYNNARISKRLWTQNPDNGSVTVLKA 325 Query: 543 ESQLDALLDKLS-------GYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 ++ D + + R + + I Sbjct: 326 VNENDEAVKIAELIYSNAYDNKCKFSDYAVFYRTNAQSRTFEDTFRLSRIPYAI 379 Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 43/200 (21%), Positives = 68/200 (34%), Gaps = 37/200 (18%) Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD 542 F ++F + I E + I + K L + + K Sbjct: 463 FAQFIKDFSTLK------NSGSVKLIVE---KVI--TDSEYLKELEAENTPESKIKI--- 508 Query: 543 ESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQA 602 + L+ + + K LA Y + + K ++ MT+H +KG + Sbjct: 509 -ENIQELISAVDDFEKNRSLDKSLAGYLTQIALMNDADSPDESKGKVTLMTLHLAKGLEF 567 Query: 603 DYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFN 662 D V I GL+EG D EERRLMYV +TRAR ++ ++ Sbjct: 568 DNVFICGLEEGLFP------------MGESAFNDKELEEERRLMYVGMTRARKCLYLCWS 615 Query: 663 KEN----------PSPFVEI 672 E PS F+ Sbjct: 616 TERKVYGKIIWNMPSRFIAE 635 >UniRef50_A8SMG4 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SMG4_9FIRM Length = 750 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 89/410 (21%), Positives = 153/410 (37%), Gaps = 48/410 (11%) Query: 193 ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 LN Q AV + LLVLAGAGSGKT VL + + + S +IL + F K Sbjct: 3 LLKGLNNKQLEAVEHFGSPLLVLAGAGSGKTKVLTTKIAYAVLEKNVSEYEILAITFTNK 62 Query: 253 AAEEMDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 A +EM ERI + TFH++ I++ +K+ + +L + E Sbjct: 63 AGKEMKERIENIFKRDISSMWIGTFHSICSKILRFNIEKIGYSNNFTIYDRDDQKLVLKE 122 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 KQ E + + + +S + Sbjct: 123 IFKQ---------------------------NLTWESVLGEFKNAIIGIISDAKGKNVKS 155 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----G 425 +E F ++ + K ++ L NA+DF LI + I + +K Sbjct: 156 SEFSK------YFSFGNNTDVVEKIYKKYEEILIKNNALDFDDLIFKTIELFKKCPEVLD 209 Query: 426 RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 + +K+I VDE+QD + + ++ L + + AVGD Q+IY + GA +S Sbjct: 210 YYSEKFKYIYVDEYQDTNDAQYEIIKLLASKYK--NVCAVGDIDQSIYGWRGANISNILN 267 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL----- 540 F +F + L+ YR +I + AN I+ N + +K L + G + + Sbjct: 268 FENDFPNSKIILLEENYRSTQKILDCANELIKNNVNRKEKNLWTKKEGGDEIIYKSYQNE 327 Query: 541 -LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + ++ + L I +L R + A ++ Sbjct: 328 NYEAIEVAQNVSNLIFEGYNLSDIAVLYRANFQSFAIENALRKNSIAYRM 377 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 31/136 (22%), Positives = 51/136 (37%), Gaps = 21/136 (15%) Query: 550 LDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVG 609 ++ + + L Y + T + TIH++KG + V I+G Sbjct: 510 INLFLEEISNSYKGIKLLEYLETNSLLSDIDKTEDSDDTVTLTTIHSAKGLEYKVVFIIG 569 Query: 610 LQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKE----- 664 + EG + +E D EERRL YVA+TRA+ +++ K Sbjct: 570 MDEGIFPSERSIKE-----------RDDGLEEERRLFYVAITRAKEKLFISSTKSMTMYG 618 Query: 665 -----NPSPFVEILKN 675 S FV+ + N Sbjct: 619 KLNLYRVSSFVDEIIN 634 >UniRef50_Q2S550 ATP-dependent DNA helicase pcrA n=2 Tax=Rhodothermaceae RepID=Q2S550_SALRD Length = 786 Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 94/419 (22%), Positives = 164/419 (39%), Gaps = 54/419 (12%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 Q LN Q AV E ++++AG GSGKT L R +LLA G+A P IL L F Sbjct: 22 EQRILDGLNDKQREAVTTTEGPVMIIAGPGSGKTRALTHRIAYLLAAGKAQPRDILALTF 81 Query: 250 GRKAAEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 KAA EM ER+ + + TFH+ +++ K+ A + Sbjct: 82 TNKAANEMQERVEALVGDDARGMWVGTFHSSFARLLRMEGDKIGYSEDFSIYDTADSKRL 141 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 I + K + K +QR ++S + + Sbjct: 142 IRQQMKGRNLDTDVVK---------------------PRSVQRMISSAKNEMIDPQEYAE 180 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-- 425 A+ + +++A + A++ ALK NA+DF L+ + I + E+ Sbjct: 181 LARGDQQ---------------EIVAEVYPAYERALKQANALDFDDLLLKPIELFEQHED 225 Query: 426 ---RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 ++ + W+++ +DE+QD + + L L ++ L VGDD Q+IY F GA ++ Sbjct: 226 VLEKYQTRWQYVHIDEYQDTNQAQYVLARKLSARHK--NLCVVGDDAQSIYAFRGADITN 283 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD 542 F ++ + L+ YR I +A+ I++N Q++K L + + + V L++ Sbjct: 284 ILNFDNDYPDATTIRLERNYRSTENIIRLADSIIEENDDQIEKSLWTDNA-EGEYVALME 342 Query: 543 ESQLDALLDKLSGY--------AKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 K+ +L R + A E ++ T Sbjct: 343 ALSEKDEAQKIERRVRDLHLRDGMEYGDFAVLYRTNAQSRAIEEALRKENVPYRVIGGT 401 Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 64/179 (35%), Gaps = 29/179 (16%) Query: 510 EVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARY 569 E+A IQ L S + L + L+ L+ Y + E I + + Sbjct: 502 ELARDLIQ------DAGLLSELRKEHTRENLQRWENVQELISALAEYVESTEDATI-STF 554 Query: 570 HHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEA 629 ++ ++ MT+HA+KG + V + GL+EG Sbjct: 555 LQEVALMTDQDEAEEGDDKVTLMTLHAAKGTEFPVVFVAGLEEGLFPL------------ 602 Query: 630 LLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDV 678 E EERRL YV +TRA R++ + + S F+E + + V Sbjct: 603 EQATQEKAELEEERRLFYVGVTRAEERLYLSWARSRYRYGEQTSNTRSRFLEEVDSDVV 661 >UniRef50_A7NGD4 UvrD/REP helicase n=11 Tax=Chloroflexi RepID=A7NGD4_ROSCS Length = 759 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 89/416 (21%), Positives = 156/416 (37%), Gaps = 54/416 (12%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 LNPAQ +AV +LVLAG GSGKT VL R +L+ P IL + F KA Sbjct: 8 LDGLNPAQRQAVTAAPGPVLVLAGPGSGKTRVLTRRVAYLIGVHGVDPHHILAVTFTNKA 67 Query: 254 AEEMDERIRERLHTED---ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 A EM +R+ + L + +T TFH++ +++ S + + Sbjct: 68 AREMRDRLEKLLGPGEAAALTVGTFHSICARFLRRDSIHLGRERDFAIYDTDDQLRVMKR 127 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 + N + + R + + + R + + Sbjct: 128 VLRDL-------------------------NLDEKKHAPRAIHAAISRAKNELIDPDAYS 162 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR---- 426 R S +++A ++ L+ NA+DF L+ + + + E+ Sbjct: 163 -----------RHAHSYFEEVVARCFARYQELLRGANALDFDDLLVETVRLFEEHPAVLE 211 Query: 427 -FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 + + +L DE+QD + + LL L ++ +F VGD+ Q++Y F GA + + Sbjct: 212 RYQERYGFLLADEYQDTNRAQYVLLKQLASRHH--NIFVVGDEDQSVYAFRGADIRNILS 269 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQN-PGQLKKPLNSLTNGDKKAVTLLDES 544 F ++ E + L+ YR I +VA I ++ + K L + + Sbjct: 270 FERDYPEAQVILLEQNYRSTQAILDVAQAVINRSAQRRRDKRLWTRNGEGVLVQVIEGYD 329 Query: 545 QLD-------ALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 Q + + ++G A I I+ R + A E R I T Sbjct: 330 QDEEAQLVAGEIARLIAGGAYQPGDIAIMYRTNAQSRAIEEALIARQAPYIIVGGT 385 Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 53/153 (34%), Gaps = 24/153 (15%) Query: 542 DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQ 601 D L ++ L+ + + + + + +T+H +KG + Sbjct: 526 DRWNNVMELRNVAEQYADLPLASQLSTFLEEVALVSDIDTLQEERNAVTCITLHQAKGLE 585 Query: 602 ADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALF 661 V +VGL+EG +A + EERRL YV TRA+ R++ L Sbjct: 586 FPVVFLVGLEEGLLPHARSADDRD------------ALDEERRLFYVGATRAKERLYLLH 633 Query: 662 NKEN----------PSPFVEILKNLDVPVARKP 684 PS F+ + + R P Sbjct: 634 AFRRATYGRTEIATPSRFLHDIPPDL--LQRAP 664 >UniRef50_Q11GU4 ATP-dependent DNA helicase, Rep family n=53 Tax=Alphaproteobacteria RepID=Q11GU4_MESSB Length = 876 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 103/502 (20%), Positives = 168/502 (33%), Gaps = 96/502 (19%) Query: 156 WRKCQAWLKDIESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVL 215 + + D E+ + A LNP Q AV E +LVL Sbjct: 4 FPDDLPFFGDDEAPHPAPREGGIAARAMAARQAQAPRYLEGLNPEQRLAVETTEGPVLVL 63 Query: 216 AGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLH---TEDITA 272 AGAG+GKT VL R +LA G A P QIL + F KAA EM RI + Sbjct: 64 AGAGTGKTRVLTTRIAHILATGRAYPSQILAVTFTNKAAREMKTRIGVLVGQAIEGMPWL 123 Query: 273 RTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEE 332 TFH++ + ++++ ++ + S + + Sbjct: 124 GTFHSIGVKLLRRHAELAGLTSSFTILDTDDQVRLLKQLI-------------------- 163 Query: 333 MQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLM 392 D R+LA +D W + G A++ + + Sbjct: 164 -----QAEALDDKRWPARQLAMMIDGWKN----KGLGPADIPEGDARAFGNGKGR----- 209 Query: 393 APLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FISPWKHILVDEFQDISPQRA 447 L A++ LK NA DF L+ I I + + + +K+ILVDE+QD + + Sbjct: 210 -ALYAAYQQRLKTLNATDFGDLLLHPIRIFREHPDVLREYHAKFKYILVDEYQDTNTAQY 268 Query: 448 ALLAALRKQNSQT--------------------------------------------TLF 463 L L ++ + Sbjct: 269 MWLRLLAQRPGSPGTGGLPAEGRARGHALGDVSQAHAAGGPGASPGQRPGGASANKVNIC 328 Query: 464 AVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQL 523 VGDD Q+IY + GA++ F ++F L+ YR + I A+ I N G+L Sbjct: 329 CVGDDDQSIYGWRGAEVDNILRFEKDFPGATVIRLERNYRSTAHILGAASHLIAHNEGRL 388 Query: 524 KKPLNSLTNGDK-KAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAAT 582 K L + + V + + L + L + A L +A+ Sbjct: 389 GKTLFTEHSDPDAPRVKVHAAWDSEEEARALGEEIE----ALQAKGHALNDMAILVRASF 444 Query: 583 RWPKLQIDFMTIHASKGQQADY 604 + + + F+T+ G Sbjct: 445 QMREFEDRFVTL----GLSYRV 462 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 34/143 (23%), Positives = 51/143 (35%), Gaps = 21/143 (14%) Query: 549 LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIV 608 L+ L + E L + A + A + MT+H++KG + D V + Sbjct: 591 RLENLKELIRSMEEYESLRAF-LEHVALVMDAERDEELDAVSLMTLHSAKGLEFDTVFLP 649 Query: 609 GLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN--- 665 G +EG + E EERRL YV +TRA+ + F Sbjct: 650 GWEEGLFPHQRSLDEG----------GRSGLEEERRLAYVGVTRAKKNLHIWFTSNRRIH 699 Query: 666 -------PSPFVEILKNLDVPVA 681 PS F++ L V V Sbjct: 700 GLWQSTIPSRFLDELPEKHVEVT 722 >UniRef50_C9LD15 ATP-dependent DNA helicase PcrA n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LD15_9BACT Length = 794 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 84/412 (20%), Positives = 159/412 (38%), Gaps = 48/412 (11%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 ++ LN +Q +AV + L++AGAGSGKT VL + +LL G P +IL L F Sbjct: 1 MQEDFLNESQRQAVQYCDGPSLIIAGAGSGKTRVLTYKVAYLLQNG-YQPWEILALTFTN 59 Query: 252 KAAEEMDERIRERLHTEDI---TARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFI 308 KAA EM ERI + + + A TFH++ I++ + + S AA + + Sbjct: 60 KAAREMRERIAQLVEPAAVAMLWAGTFHSIFARILRIEHAALGLPSTFSIYDAADAKSLV 119 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 ++ D +A+R+ + + + Sbjct: 120 KSIIRELKLD-------------------------DKIYRPGTVAARISDAKNHLMLPDE 154 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-- 426 A++ + + + + + + + NA+DF L+ + ++ Sbjct: 155 YAADV-----DRMNRDKRDGLTELVRIYNIYIERCRQANALDFDDLLLRTYLLFHDRPDI 209 Query: 427 ---FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 ++ ++++LVDE+QD + + ++ L + L VGDD Q+IY F GA + Sbjct: 210 CEKYVRKFRYVLVDEYQDTNAVQYRIIRYLCP--GEARLCVVGDDAQSIYAFRGADIGNI 267 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDE 543 F ++ + L+ YR I + AN I +N ++ K + S K + Sbjct: 268 LNFQTHYPSAKLIKLERNYRSTENIVQAANSIISRNKNRIPKTIYSENGAGDKVCIISAY 327 Query: 544 SQLDALL-------DKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 + D + +++ IL R + A + + Sbjct: 328 TDKDESAKVVKEIFKLRRQHHISLDQVAILYRTNAQSRAFEDALRNAALPYR 379 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 23/149 (15%) Query: 544 SQLDALLDKLSG-YAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQA 602 + LL+ + G ++ E +++LA Y ++ + ++ MT+HA+KG + Sbjct: 512 ENIQELLNSIKGFESEQETGVVLLADYLPQVVLLTDQDQQDDDEPKVTLMTVHAAKGLEF 571 Query: 603 DYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFN 662 + V + GL++G EERRL YVA+TRA+ + + Sbjct: 572 EAVFVTGLEDGLFP------------GTAAKYSARELEEERRLFYVAVTRAKAHCFITYA 619 Query: 663 KEN----------PSPFVEILKNLDVPVA 681 K PS F++ + V Sbjct: 620 KTRYIYGRLEFCEPSLFLQEIDPQYVETD 648 >UniRef50_B4UKQ6 UvrD/REP helicase n=4 Tax=Anaeromyxobacter RepID=B4UKQ6_ANASK Length = 797 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 93/408 (22%), Positives = 157/408 (38%), Gaps = 50/408 (12%) Query: 193 ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 LN AQ AV++ + LLVLAGAGSGKT V+V R L+ P +L + F K Sbjct: 12 LLQDLNDAQREAVLHDDGPLLVLAGAGSGKTRVIVHRIARLVRDRGVVPWHVLAVTFTNK 71 Query: 253 AAEEMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 AA EM ER+ L ++ +TFHA +++ + + + + Sbjct: 72 AAGEMRERLERLLGPLARELWVQTFHAFGARFLRREAARAGLSPSFAIYDDDDQLRLVKG 131 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 + + + R++ S++DRW + Sbjct: 132 LLSELGLDEGEG------------------------LTPRQVLSQIDRWKNQAL------ 161 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG----- 425 A E + ++ AL AVDF L+ + + +LE+ Sbjct: 162 -----RAAEVKVAGLDPETARAKEVYHRYEQALARAGAVDFGDLLLRPVRLLEEDAALRA 216 Query: 426 RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 R+ ++++LVDEFQD +P + LL L + + VGDD QAIYR+ GA +S Sbjct: 217 RWAGRFRYLLVDEFQDTNPVQYRLLQLLT--GPRRNVCVVGDDDQAIYRWRGADVSNILG 274 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKK-AVTLLDES 544 F +F + L+ YR I + A+ I + + +K L + + A+ + ++ Sbjct: 275 FDGDFPGTKVVKLEQNYRSTRTILDAAHAVISRARRRREKRLWTESGAGAPLALLVGEDE 334 Query: 545 QLDAL-----LDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKL 587 +A + G + I +L R + Sbjct: 335 HAEAERIARAVAAERGRGTSGDEIAVLYRTNAQSRPLEAAMRAARIPY 382 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 20/120 (16%) Query: 572 MRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALL 631 + A L +A P+ ++ MT+HA+KG + + V + G+++G+ + + Sbjct: 553 EQIALLGEADAATPEGRVALMTLHAAKGLEFEAVFLAGMEDGTLPYERPWADQT------ 606 Query: 632 PPVEDFPDAEERRLMYVALTRARHRVWALFNKEN--------------PSPFVEILKNLD 677 D EERRL YV +TRA+ R+ + PS F+ L Sbjct: 607 SSERDESLDEERRLCYVGMTRAKRRLTISLARRRIGYGENGPSYRNMEPSRFLRDLPPEL 666 >UniRef50_C7M3I8 UvrD/REP helicase n=3 Tax=Bacteroidetes RepID=C7M3I8_CAPOD Length = 789 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 92/417 (22%), Positives = 163/417 (39%), Gaps = 50/417 (11%) Query: 188 FFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLL 247 F +++ES LN Q AV+ + ++V+AGAGSGKT VL R L+ G IL L Sbjct: 4 FLKELES--LNAPQRAAVLQKDGPIIVIAGAGSGKTRVLTYRIANLMREG-VDAFNILAL 60 Query: 248 AFGRKAAEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARH 304 F KAA EM +RI + +++ TFH++ I++ + K+ Sbjct: 61 TFTNKAANEMKKRIASLVGNNEAKNLWMGTFHSVFAKILRIEADKLGYPQNFTIYDTQDS 120 Query: 305 ELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMR 364 + I K+ K K +R+ SR+ + + + Sbjct: 121 QRLINGIIKEMELDKDIYK-------------------------YKRIQSRISSFKNSLI 155 Query: 365 MHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK 424 + PE + R + + + + A+DF L+ + +L Sbjct: 156 TVRAYF-----NNPELMEADAMARQPRLGEIYQEYVDRCFKAGAMDFDDLLLKTNELLNL 210 Query: 425 GR-----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQ 479 + + +++ILVDE+QD + + ++ AL + + VGDD Q+IY F GA Sbjct: 211 YPDVLAKYQNRFRYILVDEYQDTNHSQYLIVKALA--DRFHNICVVGDDAQSIYAFRGAN 268 Query: 480 MSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVT 539 ++ F ++ E + L+ YR I E AN I+ N +L+K + + + Sbjct: 269 INNILNFKNDYPEAKEYKLEQNYRSTKNIVEAANSVIEHNKIRLEKVVFTENELGEPIKV 328 Query: 540 LLDESQLDA-------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + D + + + P +L R + A + R +I Sbjct: 329 HRSPTDADEGRFVASSIFENKMQHQLPNGNFAVLYRTNSQSRAIEDALRKRDIPYRI 385 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 65/178 (36%), Gaps = 26/178 (14%) Query: 512 ANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILI----LA 567 AN F K L D + ++ +L+ + + + +E + L+ Sbjct: 486 ANAFEVAEQVAKKTGLLQEFKKDGTPEGIAKMENIEEMLNGMKDFVEGQEDVADSRASLS 545 Query: 568 RYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIME 627 Y + + ++ MTIH +KG + YV +VG++E + + Sbjct: 546 EYLEDVALATDMDKEIGDDDRVALMTIHLAKGLEFPYVYVVGMEEDLFPSAMSIQSRN-- 603 Query: 628 EALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKN 675 EERRL YVALTRA + + + + PS F+E + Sbjct: 604 ----------DLEEERRLFYVALTRAEKQAYLTYAENRYRWGKLSDAEPSRFIEEIDE 651 >UniRef50_C8WBZ1 UvrD/REP helicase n=7 Tax=Alphaproteobacteria RepID=C8WBZ1_ZYMMN Length = 768 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 101/410 (24%), Positives = 171/410 (41%), Gaps = 51/410 (12%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 + LNP Q V E +LLVLAGAG+GKT+ L AR +L+ +A P QIL + F KA Sbjct: 20 LARLNPEQKEVVRTTEGALLVLAGAGTGKTAALTARLAYLVETLKAWPSQILAVTFTNKA 79 Query: 254 AEEMDERIRERLHTED---ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 A EM R+ + L ++ TFH++A ++++ ++ V + S + + Sbjct: 80 AREMQMRVGDLLGSQAENMPWLGTFHSIAAKMLRRHAELVGLKSDFIILDTDDQIRLLKQ 139 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 + + Q ++LA +DRW + Sbjct: 140 LIQGQGIDEKQ-------------------------WPAKQLAGIIDRWKNRGLTPDKIA 174 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR---- 426 + S + A L A++ L + NA DF L+ +VIL + R Sbjct: 175 GKEEDSFADGQG----------AALYLAYQKRLLSLNACDFGDLLLHMLVILTQHREVLD 224 Query: 427 -FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 + +++I+VDE+QD + + L L ++N + VGDD Q+IY + GA+++ Sbjct: 225 SYHDRFRYIMVDEYQDTNQAQYLWLRLLAQKNR--NICCVGDDDQSIYSWRGAEVANILR 282 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL----- 540 F E+F + L+ YR +I A+ I N +L K L + + +K + Sbjct: 283 FEEDFPGAKIIRLEHNYRSTPQILGAASGLITHNNARLGKTLWTERDQGEKVKIIGVWDG 342 Query: 541 -LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + QL A + L P ++ IL R + + +I Sbjct: 343 AEEARQLVADVQNLRRANIPLNKMAILIRAQFQSREFEDIFIAKNLPYRI 392 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 59/178 (33%), Gaps = 24/178 (13%) Query: 512 ANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHH 571 + + K S +AV + + L +L+ + + + + Sbjct: 487 SLSVVSHADVTRKMLDESGYKAMLRAVNDVQSAGRLENLTELARAMEEYDDLGSFLEHVS 546 Query: 572 MRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALL 631 + +I MT+HA+KG + D+V + G +EG + E + Sbjct: 547 LVMDHENDP----IDDKITLMTMHAAKGLEFDHVFLPGWEEGVFPSQRSLDEGGLN---- 598 Query: 632 PPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVP 679 EERRL YV +TRA+ PS F+ L + + Sbjct: 599 ------SLEEERRLAYVGITRAKKCCTIFHAANRRVYGQWIASTPSRFISELPDDHIE 650 >UniRef50_Q67KI7 ATP-dependent DNA helicase n=1 Tax=Symbiobacterium thermophilum RepID=Q67KI7_SYMTH Length = 825 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 91/456 (19%), Positives = 158/456 (34%), Gaps = 99/456 (21%) Query: 193 ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARG--------------- 237 S LN Q AV++G+ LL+LAGAGSGKT V+ R L+ G Sbjct: 5 LLSGLNEQQREAVLHGQGPLLILAGAGSGKTRVIAHRIAHLILFGPEYDPDAPPPPGLTA 64 Query: 238 ---------------------------EASPEQILLLAFGRKAAEEMDERIRERLHTE-- 268 P +IL + F KAA EM ER+ + + Sbjct: 65 DDLEALRLAVEGPGPIDTGAIAHLLGGGIDPWRILAITFTNKAAAEMRERVEQLVGPRAR 124 Query: 269 DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQW 328 ++ A TFH+ + ++++ +++ A + I + K+ + Q + Sbjct: 125 EVWAATFHSTCVRMLRRDIERLGYGRNFVILDAEDQQAVIRDCLKRLGLSERQFQ----- 179 Query: 329 LTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKR 388 + + + M Sbjct: 180 --------------------PGAVLGTISNAKNAMLDPRRFADRA-----------GDYW 208 Query: 389 IKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRFISPWKHILVDEFQDIS 443 + +A + ++ L++ NA+DF L+ +A+ +LE+ + +++ILVDE+QD + Sbjct: 209 RQQVAKVYALYQEQLRSGNALDFDDLLLKAVELLERFDDVREYYQRKFEYILVDEYQDTN 268 Query: 444 PQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYR 503 + + L + + L VGDD Q IY + GA +S F F L+ YR Sbjct: 269 HVQNRWVFLLAGE--KQNLAVVGDDDQGIYSWRGADISNILEFEAQFPGCRTIKLEQNYR 326 Query: 504 FNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDA------LLDKLSGYA 557 I A ++ N G+ +K L + + D +++L Sbjct: 327 STQNILSAAYAVVRHNTGRKEKRLWTAAGPGDPVYHFTAADERDEAAFVAREVERLVAEG 386 Query: 558 KP------EERILILARYHHMRPASLEKAATRWPKL 587 P + +L R H A E R Sbjct: 387 LPDGTRLDYQDFAVLYRTHAQSRALEEAMVRRSIPY 422 Score = 118 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 22/108 (20%) Query: 586 KLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRL 645 + ++ MT+H++KG + V +VGL+EG A ++ EERRL Sbjct: 601 QNKVTLMTLHSAKGLEFPVVFLVGLEEGVFPHNRALT------------DEVQMEEERRL 648 Query: 646 MYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVARK 683 YV +TRAR R++ PS F+ + V Sbjct: 649 CYVGMTRARLRLYLTNAVSRNLWGQSNYNAPSRFLLEIPAELVEEVTP 696 >UniRef50_A1BEA2 ATP-dependent DNA helicase PcrA n=2 Tax=Chlorobium RepID=A1BEA2_CHLPD Length = 734 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 101/483 (20%), Positives = 178/483 (36%), Gaps = 69/483 (14%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN Q +AV E ++VLAGAGSGKT V+ R WL+ G AS + IL L F KAA Sbjct: 7 DLNDVQRQAVRATEGPVMVLAGAGSGKTRVITYRIAWLIKNGYASAKNILALTFTNKAAG 66 Query: 256 EMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM R+ L + TFH++ +++ + A + I + Sbjct: 67 EMRHRVDVLLQQGSAGGLWIGTFHSIFARLLRNDIHLLGYDRNFSIFDADDSKSLIRQSM 126 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 + N D L + R + + Sbjct: 127 GEL-------------------------NISPDSVPLNTLQGIISRAKNSFILP------ 155 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----F 427 E R ++ A + + L+ NA+DF L+ + + + + Sbjct: 156 -----EEFRRSAGDYNQQIAAKVYDLYTRKLRENNALDFDDLLIKPLELFREHPMVLEAL 210 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 ++++L+DE+QD + + L ++ +F VGDD Q+IY + GA +S F Sbjct: 211 QDTFRYLLIDEYQDTNKAQYLAAKMLSAKHR--NIFVVGDDAQSIYSWRGADISNILNFQ 268 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL------L 541 +++ + L YR I + AN I+ N Q+KK L S + + Sbjct: 269 DDYTDALTFKLVENYRSTGTILQAANSVIRNNLRQIKKELVSHRSAGDPLTLIEARNERH 328 Query: 542 DESQLDALLDKLS-GYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQ 600 + ++ + + + R + + +I F ++ K + Sbjct: 329 EAEKIGEYIHSIRIEKGYEFRSFAVFYRTNAQSRVLEDLMRQNRIPYKI-FGSVSFYKRK 387 Query: 601 QA-DYV----IIVGLQE-----GSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVAL 650 + D V ++ ++ FP + E + + +F +AE L Y A+ Sbjct: 388 EIKDAVAYLRFLLNDRDSESLLRIINFPPRK----IGETSIGKLREFAEAEGITL-YEAI 442 Query: 651 TRA 653 TRA Sbjct: 443 TRA 445 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 52/149 (34%), Gaps = 24/149 (16%) Query: 543 ESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQA 602 L LL ++ L + + ++ + MT+HASKG + Sbjct: 506 HENLQELLSMARDFSDNNPDQGSLGDFLETISLASNYDESQDSDNYVSLMTVHASKGLEF 565 Query: 603 DYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFN 662 V I GL+E L E EERRL YVA+TRA+ +++ + Sbjct: 566 PVVFITGLEERLFP--------------LNCYEPEQLEEERRLFYVAMTRAQEKIFLSWA 611 Query: 663 KEN----------PSPFVEILKNLDVPVA 681 + S F+ + + V Sbjct: 612 QTRYLYGQPQYCLKSMFISEIDSSIVKTE 640 >UniRef50_C3QGR5 ATP-dependent DNA helicase n=23 Tax=Bacteroidales RepID=C3QGR5_9BACE Length = 792 Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 88/410 (21%), Positives = 158/410 (38%), Gaps = 48/410 (11%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARG-EASPEQILLLAFGRKAA 254 LN +Q AV + LV+AGAGSGKT VL + +LL + +P IL L F KAA Sbjct: 8 ELNESQCAAVTYNDGPSLVIAGAGSGKTRVLTYKIAYLLEQENGYNPWNILALTFTNKAA 67 Query: 255 EEMDERIRERLHTED---ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 EM ERI ++ E + TFH++ I++ ++ + S+ A + + Sbjct: 68 REMKERIARQVGMERARYLWMGTFHSIFSRILRAEAQYIGFTSQFTIYDTADSKSLLRSI 127 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 K+ + K + +R+ + + G Sbjct: 128 IKEMGLDEKTYK-------------------------PGVVQARISNAKNHLVTPTGY-- 160 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR----- 426 A+ E + ++ + + + + A+DF L+ ++ Sbjct: 161 ---AANKEAYEGDMAAKMPAIRDIYTRYWDRCRQAGAMDFDDLLVYTYILFRDFPDVLTR 217 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + + ++LVDE+QD + + +++ L K+N + + VGDD Q+IY F GA + F Sbjct: 218 YQDQFHYVLVDEYQDTNYAQHSIILQLTKENQR--ICVVGDDAQSIYSFRGADIDNILYF 275 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQL 546 + + + L+ YR I AN I++N Q++K + S + S + Sbjct: 276 TKIYPNTKVFKLEQNYRSTQTIVCAANSLIEKNERQIRKAVFSEKEKGEPIGVFQAYSDV 335 Query: 547 DA-------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + + + Y IL R + E R +I Sbjct: 336 EEGDIVANKIAELRREYHYGYAEFAILYRTNAQSRIFEEALRKRSMPYKI 385 Score = 115 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 51/140 (36%), Gaps = 25/140 (17%) Query: 555 GYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGS 614 + + + + + + + ++ MT+H++KG + V +VGL+E Sbjct: 533 RQEEGNPNVSLTDFLSEIALLTDQDSDKADDGEKVTLMTVHSAKGLEFKNVFVVGLEENL 592 Query: 615 DGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN--------- 665 + + EERRL YVA+TRA + F K Sbjct: 593 FP------------SGMVGDSPRALEEERRLFYVAITRAEEHCYLSFAKTRFRYGKMEFG 640 Query: 666 -PSPFVEILKNLDVPVARKP 684 PS F+ + DV R P Sbjct: 641 SPSRFLRDI---DVDYLRLP 657 >UniRef50_Q1J014 UvrD/REP helicase n=4 Tax=Deinococci RepID=Q1J014_DEIGD Length = 741 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 94/415 (22%), Positives = 156/415 (37%), Gaps = 46/415 (11%) Query: 187 DFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILL 246 D + LNP QA+A + LV+AGAGSGKT LV R L+ P +IL Sbjct: 3 DLPASSLLAQLNPNQAQAANHYTGPALVIAGAGSGKTRTLVYRIAHLIGHYGVDPGEILA 62 Query: 247 LAFGRKAAEEMDERIRERL-HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHE 305 + F KAA EM ER R + + + TFH+ + I++ + + + Sbjct: 63 VTFTNKAAAEMRERARHLVEGADRLWMSTFHSAGVRILRAYGEHIGLKRGFVIYDDDDQL 122 Query: 306 LFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRM 365 + E E R L LDR S + Sbjct: 123 DILKEIMGSIPG-------------------------IGAETHPRVLRGILDRAKSNLLT 157 Query: 366 HGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK- 424 +A PE + ++ A + ++ K +NA+DF LI + + + ++ Sbjct: 158 PAD-----LARHPEPFISGLPR--EVAAEAYRRYEARKKGQNAIDFGDLITETVRLFQEV 210 Query: 425 ----GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQM 480 R + I VDE+QD + + L L L VGD Q+IYRF GA + Sbjct: 211 PAVLERVQDRARFIHVDEYQDTNKAQYELTRLLAS--RDRNLLVVGDPDQSIYRFRGADI 268 Query: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL 540 F +++ + + L+ YR ++R+ +AN+ I+ N +L+K L + + Sbjct: 269 QNILDFQKDYLDAKVYMLEQNYRSSARVLTIANKLIENNAERLEKTLRPVKEDGHPVLFH 328 Query: 541 L------DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + + L +L + +L R + E +I Sbjct: 329 RATDQRAEGDFVAEWLTRLHAEGMRFSDMAVLYRTNAQSRVIEESLRRVQIPAKI 383 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 33/153 (21%), Positives = 57/153 (37%), Gaps = 24/153 (15%) Query: 534 DKKAVTLLDESQLDALLDKL--SGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDF 591 + V L + +L + ++ + + A + ++ P+ + Sbjct: 505 QEGQVRLENLEELVSAAEEWSRENEGTIGDFLDDAALLSSVDDMRTKQENKDVPEDAVTL 564 Query: 592 MTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALT 651 MT+H +KG + V IVG +EG A +E EERRL YV +T Sbjct: 565 MTLHNAKGLEFPVVFIVGTEEGLLPSKNAL------------LEPGGIEEERRLFYVGIT 612 Query: 652 RARHRVWALFNKENP----------SPFVEILK 674 RA R++ + S F+E +K Sbjct: 613 RAMERLFLTAAQNRMQYGKTLATEDSRFLEEIK 645 >UniRef50_C7NAU4 UvrD/REP helicase n=5 Tax=Fusobacteriaceae RepID=C7NAU4_LEPBD Length = 735 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 91/408 (22%), Positives = 161/408 (39%), Gaps = 47/408 (11%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 LN Q +A E +L+LAGAGSGKT + R ++ SP IL L F KA Sbjct: 5 LDELNEEQRKAAEKIEGPVLILAGAGSGKTRTVTYRIAHMVKEIGISPLNILALTFTNKA 64 Query: 254 AEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 A EM ER + ++ TFH+ ++ +++ S+++ + I + Sbjct: 65 AREMKERAAALIGHEANNLVVSTFHSFSVRLLKTYSERIGYGRNFNIYDVDDQKSIITKI 124 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 +K+ K +D +LA+R+ + + Sbjct: 125 KKEMGIK------------------------DNDNVQPGKLANRISKLK---------EQ 151 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK----GRF 427 + E D+ +L + + + LKA NA+DFS L+ A +L+ R Sbjct: 152 GIGIKELEREIDMRIPANRLFGEIYQKYDEVLKANNAMDFSDLLLNARKLLDDTFVLERI 211 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 +K+I+VDE+QD + + ++ + + + VGD+ Q+IY F GA ++ F Sbjct: 212 QERYKYIVVDEYQDTNDIQYEMINMIAAKYR--NICVVGDEDQSIYAFRGANINNILNFE 269 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL------ 541 ++ E L+ YR +I + AN I+ N K L + + +K Sbjct: 270 RDYKEAFTVKLERNYRSTKKILDTANELIKNNKSSKGKTLWTDGSDGEKIKIYNAMTVYD 329 Query: 542 DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + + + K + + IL R + EK + +I Sbjct: 330 EADFIVTEMKKKKRDGADYKDMTILYRTNAQSRVLEEKLLSANIPYKI 377 Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 60/148 (40%), Gaps = 24/148 (16%) Query: 545 QLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADY 604 ++ LL+ + K + L Y M S + + MTIH+SKG + DY Sbjct: 504 NIEELLNSIIELEKQNPNMS-LNEYLDMISLSSSTDEMEDDENYVKLMTIHSSKGLEFDY 562 Query: 605 VIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNK- 663 V + G+++G FP+ + +S EE YVA+TRA+ ++ ++ Sbjct: 563 VFLAGMEDGL--FPSISFDSPEEELEEERRL----------CYVAITRAKKELFISYSSS 610 Query: 664 ----------ENPSPFVEILKNLDVPVA 681 PS F+ +K ++ Sbjct: 611 RKIWGKDDNLRRPSRFIYEMKQDNLEYV 638 >UniRef50_B7AA42 UvrD/REP helicase n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AA42_THEAQ Length = 701 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 100/406 (24%), Positives = 168/406 (41%), Gaps = 46/406 (11%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 + S LN AQ +AV++ E LV+AGAGSGKT +V R +L+AR P +IL + F Sbjct: 8 EEALLSSLNEAQRQAVLHFEGPALVVAGAGSGKTRTVVHRVAYLIARRGVFPSEILAVTF 67 Query: 250 GRKAAEEMDERIRERL-HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFI 308 KAAEEM R++ + ++ TFHA AL I++ ++V + + Sbjct: 68 TNKAAEEMKARLKAMVRGAGELWVSTFHAAALRILRVYGERVGLKPGFVVYDEDDQTALL 127 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 E K+ + + + G Sbjct: 128 KEVLKELGLAAKPGP--------------------------------IKSLLDRAKNQGV 155 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG--- 425 ++ PE L R++ +L ++ AL+A+ A+DF ++ A+ +LE+ Sbjct: 156 PPEHLLLELPEFYAGLSRGRLQ---DVLHRYQEALRAQGALDFGDILLYALKLLEEDGEV 212 Query: 426 --RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 R + I VDE+QD +P + L + + L AVGD Q IY F A + Sbjct: 213 LKRVRKRARFIHVDEYQDTNPVQYRFTRLLAGE--EANLMAVGDPDQGIYSFRAADIRNI 270 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDE 543 F +++ + L+ YR I AN I +N +L+K L + G + E Sbjct: 271 LDFTQDYPKARVYRLEDNYRSTEAILRFANAVIVKNALRLEKTLRPVKKGGEPVRLFRAE 330 Query: 544 SQLDA---LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPK 586 S D + ++++ P +R+ +L R + + A+R Sbjct: 331 SARDEARFVAEEIARLGPPFDRVAVLYRTNAQSRLLEQALASRGIP 376 Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 55/147 (37%), Gaps = 22/147 (14%) Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQAD 603 + L+ + + + L + + + ++ MT+H +KG + Sbjct: 498 EDAEDRLENVEELLRAAKEAESLMDFLDKVALTARAEEPAEAEGRVALMTLHNAKGLEFP 557 Query: 604 YVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNK 663 V +VG++EG ++ EERRL YV +TRA+ R++ + + Sbjct: 558 VVFLVGVEEGLLPHRSSLST------------QEGLEEERRLFYVGVTRAQERLYLSYAQ 605 Query: 664 E----------NPSPFVEILKNLDVPV 680 E PS F+E + V Sbjct: 606 EREIYGRLEPVRPSRFLEEVDEGLYEV 632 >UniRef50_B3QYS3 UvrD/REP helicase n=9 Tax=Chlorobiaceae RepID=B3QYS3_CHLT3 Length = 765 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 84/413 (20%), Positives = 152/413 (36%), Gaps = 53/413 (12%) Query: 191 QVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFG 250 + LN Q +AV + ++++AGAGSGKT V+ R +++ + +P QIL L F Sbjct: 16 ETLLKSLNTEQKKAVETTKGPVMIIAGAGSGKTRVITFRIAYIINKENCAPNQILALTFT 75 Query: 251 RKAAEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 KAA EM R+ E L T + TFH+ +++Q + ++ S A + Sbjct: 76 NKAANEMRSRVEEILGTGSTRGLWIGTFHSNFARLLRQHADRLGFTSDYTIYDADDSKNL 135 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 I + + D + ++ + + Sbjct: 136 IKQIITELGI-------------------------ATDVLAPNAVQGKISMAKNRLVTPE 170 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR- 426 E+ A + + L+ NA+DF L+ + I + + Sbjct: 171 QMSQNASDFISEKT-----------AEVFYKYNERLQKNNALDFDDLLIKPIKLFNEHPE 219 Query: 427 ----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + +++I++DE+QD + + + L Q+ + VGDD Q+IY + GA ++ Sbjct: 220 ILAHYQERFQYIMIDEYQDTNRAQYIVAKMLAGQHR--NICVVGDDAQSIYSWRGADIAN 277 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL-- 540 F ++ E C L+ YR I +VAN I N QL+K L + + Sbjct: 278 ILGFQNDYKEATICRLEENYRCTKTILKVANTVISNNKEQLEKTLYTSNETGEPVTLFEA 337 Query: 541 -----LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 E A+ ++ I R + A + + Sbjct: 338 TDERREAEKVAMAIRERKLSSGNQNSDFAIFYRTNAQSRALEDALRFNGIAYR 390 Score = 93.1 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 44/123 (35%), Gaps = 24/123 (19%) Query: 566 LARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESI 625 L + + ++ Q+ MTIHA+KG + V + GL+E + Sbjct: 543 LNAFLQSASLATDQDNADANGNQVTLMTIHAAKGLEFPVVFVTGLEERLFPLNPDEPREL 602 Query: 626 MEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKN 675 EE L YVALTRA +++ F K S F+E L Sbjct: 603 EEERRL--------------FYVALTRAEKKLYVSFAKSRYKFGQSFPAKRSRFIEELDG 648 Query: 676 LDV 678 V Sbjct: 649 GSV 651 >UniRef50_B9X9R1 UvrD/REP helicase n=1 Tax=bacterium Ellin514 RepID=B9X9R1_9BACT Length = 689 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 102/419 (24%), Positives = 168/419 (40%), Gaps = 64/419 (15%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 + S LNP Q A +L+LAGAG+GKT V+ R ++ RG +P IL + F Sbjct: 2 LNLSTLNPQQRMAAETIRGPVLILAGAGTGKTRVITFRIAHMIERG-VAPGSILAVTFTN 60 Query: 252 KAAEEMDERIRERLH----------TEDITARTFHALALHIIQQGSKKVPIVSKLENDTA 301 KAA EM ER+ + + E T TFH+L + I++Q +K+ Sbjct: 61 KAAREMQERVNKLIPRPSKKSRDEKPERPTLCTFHSLCVRILRQHIEKLGYKKNFVIYDQ 120 Query: 302 ARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVS 361 I + Q S K ++ + + L ++ + Sbjct: 121 TEQLGAIKKILSQVSAK-------------------------GEKTDPAAILAMLSKYKN 155 Query: 362 LMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVI 421 E I + E IR ++ AL+A NAVDF LI + + Sbjct: 156 GGSQAAAFADESIKAMAEHIRT--------------RYESALRACNAVDFDDLILLTLRL 201 Query: 422 LEKGR-----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFS 476 E+ + +++I+VDE+QD + + +L+ L K++ L VGDD Q+IY + Sbjct: 202 FEEHPDALEACRNRFRYIMVDEYQDTNASQFSLVHYLTKEHR--NLCVVGDDDQSIYGWR 259 Query: 477 GAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKK 536 GA++S ++F E + L+ YR + I AN I+ N + K L S K Sbjct: 260 GAEISNLLDMEKHFPEVKVVKLEQNYRSTNVILTAANAVIKNNLRRRGKQLWSDKGQGTK 319 Query: 537 AVTLL---DESQLDALLDKLS----GYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 DE++ A+++++ P + IL R + A + Sbjct: 320 ITLHTFESDEAEAKAIVEQIEFKRLASRIPWSQQAILFRTNIQSRALETALRQGQVRYH 378 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 23/116 (19%) Query: 575 ASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPV 634 S K + +T+H+ KG + +V IVGL++G + E Sbjct: 561 DSERKEEKEAQGEAVTLITMHSCKGLEFPHVYIVGLEDGLLPHSRSKVEGT--------- 611 Query: 635 EDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPV 680 EERRL YVA+TRA + + PS F++ L V + Sbjct: 612 ----LDEERRLFYVAITRAMQTLTISYCTGRKKYGQVMPCHPSGFLKELPEELVEL 663 >UniRef50_A6NZ65 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NZ65_9BACE Length = 830 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 94/454 (20%), Positives = 161/454 (35%), Gaps = 90/454 (19%) Query: 191 QVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGE------------ 238 +++ LNP Q +A + E LL+LAGAGSGKT+VL+ R L+ G Sbjct: 30 ELDYQNLNPEQRKAALATEGPLLLLAGAGSGKTTVLIHRIANLMKYGRGSDCDEVPEWVT 89 Query: 239 ------------------------------ASPEQILLLAFGRKAAEEMDERIRERLHT- 267 A P I+ + F KAA E+ ER+ L Sbjct: 90 AEDLAFLEGYVAHPDPEKKAEQERLCRVDPAVPWSIIAITFTNKAAGELKERLERMLGPS 149 Query: 268 -EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWR 326 DI A TFH+ + I+++ ++ A E I + K Sbjct: 150 ANDIWASTFHSACVRILRRDIDRLGFSKSFTIYDTADAERVIKDIIKDF----------- 198 Query: 327 QWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFS 386 N D + + + R M+ + A E Sbjct: 199 --------------NLDDKAFPAKSIVGYISRAKDAMK--------LGADYLAECEKSGD 236 Query: 387 KRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRFISPWKHILVDEFQD 441 R+ +A + ++ L+ NA+DF +I + +L+ + + ++++L+DE+QD Sbjct: 237 YRLIKIAKVYVEYEKRLRDANALDFDDIILHTVRLLKEFDEVREYYQRKFRYVLIDEYQD 296 Query: 442 ISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTT 501 + + L + L + VGDD Q+IYRF GA + +F + L+ Sbjct: 297 TNNLQYLLASTLA--GGYENICVVGDDDQSIYRFRGATIENILSFESQYKGARVIRLEQN 354 Query: 502 YRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGY----- 556 YR I E +N I+ N G+ K L + K ++ D + Sbjct: 355 YRSTKNILEASNAVIRNNEGRKGKELWTDHGEGDKVQCYTAMNEHDEAQYVAAQILGSFS 414 Query: 557 -AKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + + +L R + + +I Sbjct: 415 AGRHWKDHAVLYRMNAQSNQIEQAFKRNGVPYRI 448 Score = 74.6 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 50/157 (31%), Gaps = 26/157 (16%) Query: 542 DESQLDALLDKLSGYAKPEERILI---LARYHHMRPASLEKAATRWPKLQIDFMTIHASK 598 ++ + +L + LA + + + + + MT+H++K Sbjct: 572 EDRTRLENVQELLTSINGYLENAVEPSLAGFLDEIALYTDLDSHDPEEDCVVMMTMHSAK 631 Query: 599 GQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVW 658 G E + + E EERRL YVA+TRA+ +++ Sbjct: 632 GL------------EFPVVFVVGVEEGIFPGIRAIGEAEEMEEERRLCYVAMTRAKEKLY 679 Query: 659 ALFNKE----------NPSPFVEILKNLDV-PVARKP 684 + PS F+ + V R P Sbjct: 680 MTCASQRMLFGRTNNNRPSRFLGEIPEEYVEKSGRLP 716 >UniRef50_B0MU18 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B0MU18_9BACT Length = 813 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 102/415 (24%), Positives = 172/415 (41%), Gaps = 48/415 (11%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 LN AQ AVVN + L++AGAGSGKT VL +R +++ +G +P IL L F Sbjct: 2 ESQILKGLNQAQRDAVVNYDSPSLIIAGAGSGKTRVLTSRIAYMIEQG-VAPYNILALTF 60 Query: 250 GRKAAEEMDERIRERLHTED---ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHEL 306 KAAE+M ERI + L I TFH++ I++ ++++ + + Sbjct: 61 TNKAAEQMRERIAQMLPDGRHRYIRMGTFHSVFSRILRDNAERIGFPQSFTIYEPSDCKN 120 Query: 307 FIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMH 366 + K+ N D + LASR+ + + Sbjct: 121 LLKTIVKEL-------------------------NLDDTKYKPAMLASRISYAKNCLVTP 155 Query: 367 GGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-- 424 G A A+A + +I + + K A+DF L+ Q ++L Sbjct: 156 GAYLANAGAAAEDR-----RMQIPEFGNIYNIYCARCKRNGAMDFDDLLLQTNILLRDCP 210 Query: 425 ---GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMS 481 R+ +K+ILVDE+QD + + ++ L + +S+ + VGDD Q+IY F GA++ Sbjct: 211 DVTARYQEQFKYILVDEYQDTNYAQYVIIRRLSQLHSK--VCVVGDDAQSIYSFRGAKIE 268 Query: 482 LTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL 541 +F ++F L+ YR I E AN I++N +++K S + +K L Sbjct: 269 NILSFKKDFPNAMIFKLEQNYRSTRTIVEAANSVIERNSKRMEKKCFSEGDMGEKIRVLR 328 Query: 542 DESQLDALL-------DKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + + DK+ IL R ++ A + + +I Sbjct: 329 AYTDREEAEMVVSDLRDKVRAAGDEWAEAAILYRTNNQSQALEDALRRKGIPYRI 383 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 64/179 (35%), Gaps = 24/179 (13%) Query: 509 GEVANR--FIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILIL 566 E+A R I + S + ++ + + + +G + EER I Sbjct: 492 LEIATRSGIIGAYRAENTPEATSALDNIEELLNSMQLFNEQREAEIRAGERQQEERATIE 551 Query: 567 ARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIM 626 + + + ++ MT+H++KG + +V IVGL+E A Sbjct: 552 EWLQGVMLMTDMDKDDPQDRNKVTLMTVHSAKGLEYKFVYIVGLEENLFPSQRAVESPD- 610 Query: 627 EEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNK----------ENPSPFVEILKN 675 EERRL YVALTRA+ + + PS F+ + + Sbjct: 611 -----------GFEEERRLFYVALTRAKELATLSYAEMRFKWGNMEFSRPSCFLREIDS 658 >UniRef50_C1A8M7 ATP-dependent DNA helicase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8M7_GEMAT Length = 820 Score = 390 bits (1002), Expect = e-107, Method: Composition-based stats. Identities = 87/409 (21%), Positives = 148/409 (36%), Gaps = 52/409 (12%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 + LNP Q AV + + LVLAGAGSGKT VL R L+ +P +IL + F KA Sbjct: 26 TRGLNPGQTEAVFHDDGPALVLAGAGSGKTRVLTTRIARLIGTMNVAPHEILAVTFTNKA 85 Query: 254 AEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 A EM RI + L + + TFHAL +++ + V + Sbjct: 86 AGEMRARIAKFLGHEPKGMWCGTFHALGARMLRGVAPLVGREQNFTIYDEDDAIGAVKRV 145 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 ++ N E + + S + + + Sbjct: 146 MER-------------------------RNLSPKEFAPKAILSAISSAKNALISP----- 175 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGR 426 E R+ +A + + AL+ NAV F L+ + LE + Sbjct: 176 ------SEFARNARDTFATAVAGVYTDLEVALQQANAVTFDDLLVLPVRALETDEALRAH 229 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + ++++LVDE+QD + + + + + VGDD Q+IY + GA + F Sbjct: 230 YQRRFRYLLVDEYQDTNAAQYRFVQLM--GGGYRNVMVVGDDDQSIYGWRGADIRNILDF 287 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL------ 540 +F L+ YR + +AN I +N + K L + + + Sbjct: 288 ERDFPGARIVRLEENYRSTPNVLALANAVIAENTERRGKTLRATRPAGEAVTLIEALDER 347 Query: 541 -LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 + + +L ++S IL R + A + R + Sbjct: 348 DEADFIAETILTRMSRSDLARRDCAILYRTNAQSRAIEDAFRRRNIPYR 396 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 22/108 (20%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 + MT+H +KG + V + GL++G A + EERR Sbjct: 571 NADAVTCMTMHNAKGLEFPLVFVCGLEDGLFPLARA------------AEDPAQLEEERR 618 Query: 645 LMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVAR 682 L YV +TRA +++ ++ PS F+E++K + Sbjct: 619 LFYVGITRAEEKLYLTCAEQRRRNGELMYSMPSRFLEVIKPSLAERGK 666 >UniRef50_Q1DC55 ATP-dependent DNA helicase PcrA n=2 Tax=Cystobacterineae RepID=Q1DC55_MYXXD Length = 783 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 93/412 (22%), Positives = 159/412 (38%), Gaps = 53/412 (12%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 LN Q AV++G+ LLVL+GAGSGKT V+ R +L+ P +IL + F Sbjct: 8 ESALLEDLNAPQREAVLHGDGPLLVLSGAGSGKTRVITRRVAYLVKVHNVYPWRILAVTF 67 Query: 250 GRKAAEEMDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 KAA EM ER+ + L + ++ TFH+ A I+++ ++ V + + Sbjct: 68 TNKAAREMRERLVQLLGAQANELVVSTFHSAAAQILRREAEHVGLTRSFVIYDDSDQLNV 127 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 + ++ + Q R + R+D+ + R+ Sbjct: 128 VKRAMREAGIESMQ---------------------------PREILHRIDQEKNAARLPE 160 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR- 426 Q +R +L+ + A++ L+A NAVDF L+ + + Sbjct: 161 HMQ-----------VAPGDERGQLVRKVYAAYQERLRAANAVDFGDLLLLLVTLFRTRPD 209 Query: 427 ----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + + H+LVDEFQD +P + ALL L L VGDD Q+IYR+ GA + Sbjct: 210 VLENYRRRFHHVLVDEFQDTNPVQYALLKQLAPP-PSANLVVVGDDDQSIYRWRGADVDN 268 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTN-------GDK 535 F + + L+ YR + I + A+ I++N +++K L S Sbjct: 269 ILGFPRQYPGAKVVKLEQNYRSDQNILDAAHEVIRKNTRRMEKKLWSERQRGQTLNLMLN 328 Query: 536 KAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKL 587 + + +L + + R + E Sbjct: 329 RDERAEGQEVARQILALQREGFIKLSSMAVFYRANAQSRVLEEALRLARVPY 380 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 20/119 (16%) Query: 586 KLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVE---DFPDAEE 642 ++ MT+HA+KG + D V + G++E A + + + AEE Sbjct: 580 DGRVALMTLHAAKGLEFDAVFLTGMEENVFPHSRAVKSESTFLNEVASADGEPSEEMAEE 639 Query: 643 RRLMYVALTRARHRVWALFNKEN----------PSPFVEI-------LKNLDVPVARKP 684 RRL YV TRAR R++ + PS F+ + +VP A +P Sbjct: 640 RRLCYVGFTRARKRLFVSLAQCRSLFGELRYNAPSRFLRDVPPALFGISEQEVPEAPRP 698 >UniRef50_C7H111 ATP-dependent DNA helicase PcrA n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H111_9FIRM Length = 753 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 96/426 (22%), Positives = 165/426 (38%), Gaps = 54/426 (12%) Query: 181 MLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEAS 240 ML + LN Q + V E LLVLAGAGSGKT ++ R +L+ Sbjct: 1 MLEKPKINEESEILKSLNDMQKQGAVTTEGPLLVLAGAGSGKTKMMTHRMAYLILEKNVD 60 Query: 241 PEQILLLAFGRKAAEEMDERIRERLHTED-----ITARTFHALALHIIQQGSKKVPIVSK 295 P+ IL + F KAA EM +R +H+ + +TFHA L I++ + + Sbjct: 61 PQNILAVTFTNKAANEMKQRAEFLIHSRGRSLKGLWIKTFHATCLAILKNHAGALGYGEN 120 Query: 296 LENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASR 355 TA+ + + K+C E + S Sbjct: 121 FLIYTASDQKAAVKRAIKEC-------------------------EISPKEYPVKMFTSF 155 Query: 356 LDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLI 415 + + S + S + ++ + +A++ LKA NA+DF L+ Sbjct: 156 ISKCKSQKIVPDEVFDYF----------DDSFKTQISQQVYEAYQNVLKANNAMDFDDLL 205 Query: 416 HQAIVILEKGR-----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQ 470 +++ K + +K+I+VDE+QD S + L+ L + + VGDD Q Sbjct: 206 LNTVILFSKYPDILKIYAERFKYIMVDEYQDTSSLQFELINKLA--HVHKNICVVGDDDQ 263 Query: 471 AIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSL 530 IY + GA + +F + + + L+ YR I + A+ I N + +K L + Sbjct: 264 CIYEWRGATIENILSFEKVYKGTKIIKLERNYRSTKNILDAAHAVISNNSKRKEKKLWTG 323 Query: 531 TNGDKKA---VTLLDESQLDALLDKLS----GYAKPEERILILARYHHMRPASLEKAATR 583 + +K V ++ + ++DK+ K + I IL R + E Sbjct: 324 SVEGEKISIEVYENAHAEAEFIVDKIRQAVAEEGKTYKDIAILYRNNSQSRLFEEALKRW 383 Query: 584 WPKLQI 589 +I Sbjct: 384 DVPYRI 389 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 72/215 (33%), Gaps = 34/215 (15%) Query: 476 SGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDK 535 GA+ F + + LD R I V I+ ++ L + Sbjct: 469 RGAE-----EFIKMIKHAQDMLLDENTR----ISNVLKYIIE--TSGYERKLKLADTLES 517 Query: 536 KAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIH 595 A + ++ D+ G + ++ L L+ + + + MT+H Sbjct: 518 DAKLENIYELVASVADR-EGSSAGDDEKLTLSAFLEEIALISDVDNHDETADAVVLMTLH 576 Query: 596 ASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARH 655 +SKG + + V I G++EG + EERRL YV TRA+ Sbjct: 577 SSKGLEFNVVFIPGMEEGIFP------------SGQGDDNPGKIEEERRLCYVGFTRAKE 624 Query: 656 RVWALFNKEN----------PSPFVEILKNLDVPV 680 ++ K PS F++ + V Sbjct: 625 ELFLSAAKWRRHYYEDMYMQPSRFLDEVPEELVKT 659 >UniRef50_UPI0001C37867 ATP-dependent DNA helicase PcrA n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37867 Length = 786 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 91/469 (19%), Positives = 160/469 (34%), Gaps = 95/469 (20%) Query: 173 HNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGW 232 + ++ A +F ++ N Q AV +LVLAGAGSGKT+V+V R Sbjct: 2 ASNSFVSAKQEALKKYFSRM-----NDMQQEAVFTVNGPVLVLAGAGSGKTTVIVNRIAN 56 Query: 233 LLARGE---------------------------------------ASPEQILLLAFGRKA 253 ++ G P IL + F KA Sbjct: 57 MIKFGNAFYDETRSGSEEDIAFLKDYAAGKTDDADTLRDIVAADPIKPWNILAITFTNKA 116 Query: 254 AEEMDERIRERLHTED---ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 A E+ ER+ L E+ I A TFH+ + I++ + S + + I Sbjct: 117 AGELKERLAAMLGEEEAVKINASTFHSACVRILRSEITALGYGSDFTIYDSDDSQRMIKS 176 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 + + Q + + + R M + Sbjct: 177 VMAELDISEKQL-------------------------APKAVLGEISRAKDQMITPEQLR 211 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----G 425 A+ R K++A + ++ ++ NA+DF ++ + + E+ Sbjct: 212 ADA----------GQDYRKKMVAKIYARYQEGMRTANALDFDDILTLTVELFEQFPEVLE 261 Query: 426 RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 ++ + +K+I+VDE+QD + + L++ L + L VGDD Q+IY+F GA + Sbjct: 262 KYRTRYKYIMVDEYQDTNHVQFRLVSLLSDSHK--NLCVVGDDDQSIYKFRGANIENILG 319 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL----- 540 F + F + L+ YR I AN I N G+ K L + K Sbjct: 320 FEDQFAGAKVIRLEQNYRSTQTILNAANSVIGNNVGRKAKTLWTAGEQGDKVYWYKAVDE 379 Query: 541 -LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 + + + + K +L R + A + Sbjct: 380 TDEANFVAETIKKYHKETGRYADNAVLYRMNAQSNAIERMLMKCGIPYR 428 Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 56/154 (36%), Gaps = 25/154 (16%) Query: 539 TLLDESQLDALLDKLSGYAKPEERIL---ILARYHHMRPASLEKAATRWPKLQIDFMTIH 595 TL + + +L L + E ++ MT+H Sbjct: 548 TLENADTKIENVQELRSSVVQYMNESEEPTLGGFLEEVALYTEADRDPETDDKVTLMTVH 607 Query: 596 ASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARH 655 ++KG + D + +VGL +G FP++ ++ EERRL YVA+TRA+ Sbjct: 608 SAKGLEYDNIFVVGLDDGI--FPSSRSFDSEDD----------MEEERRLAYVAITRAKK 655 Query: 656 RVWALFNKENP----------SPFVEILKNLDVP 679 ++ + S F+ + + + Sbjct: 656 HLYLTNASQRMLFGQTQRNVTSRFMREIGSELIE 689 >UniRef50_C4FEN7 Putative uncharacterized protein n=3 Tax=Bifidobacterium RepID=C4FEN7_9BIFI Length = 716 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 158/557 (28%), Positives = 253/557 (45%), Gaps = 30/557 (5%) Query: 151 NCREAWRKCQAWLKDIESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEH 210 + + K S RL+ A + VE + L+ Q A+V H Sbjct: 114 PSLDLIGRHYGTTKRSNSRRLEPQPLLDAATIANARSTIGNVEKNELSDEQISAIVGAAH 173 Query: 211 SLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDI 270 + LVLAGAG+GKT+ +V WLL G+A P +IL+L+F RK+A+EM RI+ + I Sbjct: 174 NTLVLAGAGTGKTTTIVGYIAWLLNTGKAQPNEILVLSFTRKSADEMSARIQAQTGAA-I 232 Query: 271 TARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLT 330 A TFH+L L I + + + A F + K + L Sbjct: 233 RACTFHSLGLEICRSSTIANRPIIDENVANKAIKAAFDQLLTTSIPYRLLAFKLMPKHLG 292 Query: 331 EEMQWSVPEGNF------WDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDL 384 E+ + NF +D + + L + MR + M A Sbjct: 293 EKYAAAARLENFRLPVKDYDFSQYAQHLVDTAKTIIQQMRSNNINVDGMRALNRRYGGKH 352 Query: 385 FSKRIK---LMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQD 441 + + L+ PL +A+ +A N +DF G+I AI ++ G++ ++++L+DE+QD Sbjct: 353 TGRNAEMLDLIEPLYRAYAECFRANNGIDFPGMIVDAIQCVKTGKYRHEYRYVLIDEYQD 412 Query: 442 ISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE---NFGEGERCDL 498 +S R AL+ ALR+Q +LF VGDDWQ+IYRF+G+ + L F + +GE + Sbjct: 413 MSRPRYALIRALREQ-RDFSLFCVGDDWQSIYRFAGSDIGLILDFDKLWEQWGETRMFQI 471 Query: 499 DTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL----LDESQLDALLDKLS 554 TT RF + + E + F+ +P K L+S ++ E + ++++L Sbjct: 472 TTTRRFRTSLIEASGDFVMADPSLYVKHLHSTNEKKDYSLKALGGKTPEERFTVIVEQLR 531 Query: 555 GYAKPEERILILARYHH------------MRPASLEKAATRWPKLQIDFMTIHASKGQQA 602 K +L+ R P++ I+FMT H SKG Q Sbjct: 532 KLPKKASVLLLGRYRSDLNLITGQDREGLFRCDGNSITFLEKPEMTIEFMTAHKSKGLQR 591 Query: 603 DYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFN 662 D+V ++ G GFP+ E + LLP VE +P AEERRL YVA+TR + +++ + + Sbjct: 592 DFVFLLCCSGGLKGFPSTIPEEPLLGLLLPEVERYPHAEERRLFYVAMTRCKKKIFFVVD 651 Query: 663 KENPSPFVEILKNLDVP 679 + PS F+ L + P Sbjct: 652 QTRPSRFIYELHDRICP 668 >UniRef50_D0LJZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJZ3_HALO1 Length = 787 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 95/409 (23%), Positives = 167/409 (40%), Gaps = 56/409 (13%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 ++ LNPAQ +AV +G+ L+VLAGAG+GKT VLV R ++ RG P IL + F KA Sbjct: 4 TAQLNPAQRKAVEHGDGPLMVLAGAGTGKTRVLVNRIAHMVDRG-VPPRDILAVTFTNKA 62 Query: 254 AEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 A+EM ER+RE L + TFHA + +++ + + + + + + Sbjct: 63 AKEMRERLRELLGMAANAMWIGTFHATCVKLLRIHGEHIGLSRDFTIFDSDDQKRLLNAL 122 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 K+ + D+ + LA ++DR S Sbjct: 123 IKEHGLE--------------------------DQVSAKTLAVQIDRCKSR--------- 147 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRF---- 427 + + L+ + ++ + + AVDF+ L+ + + + Sbjct: 148 -----DEDPMDRHGGWGDDLLREIYPLYQAGMAQQGAVDFNDLLLKVLELARDPTVGPVL 202 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + + H+LVDEFQD + + L+ + L VGDD Q+IY + GA+ F Sbjct: 203 SARFDHVLVDEFQDTNRVQFRLVRHFADVSR--NLTVVGDDDQSIYSWRGAEPRNLLEFK 260 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL---DES 544 ++ + E L+ YR S I + AN I +N + +K L + ++G + + D Sbjct: 261 RDYPDAEVVKLEQNYRSTSVILDAANAVIAKNRNRHEKALWTASDGGESILWEPCPSDRE 320 Query: 545 QLDALLDKLSG----YAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + + + G + + IL R E+ +I Sbjct: 321 EATFIARAIRGLVSAENRDFSDMAILYRTRAQSRQLEEQLRRFDIHYEI 369 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 55/134 (41%), Gaps = 19/134 (14%) Query: 561 ERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAA 620 E ++ ++ S A + ++ MTIHA+KG + V + GL+EG Sbjct: 521 EDASLVEFLANVALQSSGDKAESGDRGKVKMMTIHAAKGLEFPVVFLCGLEEGLFPSLRE 580 Query: 621 ARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNK----------ENPSPFV 670 + + EE RL YVA+TRAR R+ + + PS F+ Sbjct: 581 RDD---------QNDGDTLEEEYRLAYVAITRARERLVLTYAMQRMIWGETRSQRPSRFL 631 Query: 671 EILKNLDVPVARKP 684 + + + + V +P Sbjct: 632 DSIPDDCLAVRAEP 645 >UniRef50_D1PL59 ATP-dependent DNA helicase n=4 Tax=Ruminococcaceae RepID=D1PL59_9FIRM Length = 871 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 92/466 (19%), Positives = 167/466 (35%), Gaps = 91/466 (19%) Query: 178 TEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARG 237 D + + + + LNP Q +AV E LL+LAGAGSGKT+VLV R ++ G Sbjct: 4 ITQEYIALRDQYIESKFTRLNPVQRQAVFTTEGPLLILAGAGSGKTTVLVNRIANIIRFG 63 Query: 238 EA----------------------------------------SPEQILLLAFGRKAAEEM 257 A P +L + F KAA E+ Sbjct: 64 SAHGSKELPRTVTQQDLEDLRATVQSGRDLPRETAYLAVRPARPWNVLAITFTNKAAGEL 123 Query: 258 DERIRERLHT---EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 ER+R L D+ A TFH+ + I+++ ++++ + + + + K Sbjct: 124 KERLRAMLGETMGGDVNASTFHSACVRILRRDAERIGFPKSFTIYDSDDQQRVLKQIYKD 183 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 + + + S + + +++ Sbjct: 184 -----------------------------------KMIDDKFLPIKSAVSQISSYKDKLM 208 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRFIS 429 + + L++ + + G LK A+DF LI+ + +L+ + + + Sbjct: 209 SPEDVAAETPRDTKAALISKIYTTYAGRLKTAGAMDFDDLIYHTVRLLQTDAEAREYYQN 268 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 +++++VDE+QD S + L+ L + VGDD Q+IY+F GA + F + Sbjct: 269 KFRYVVVDEYQDTSIAQFHLVRLLA--GGTNNVCVVGDDDQSIYKFRGATIENILNFEQV 326 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL------LDE 543 F + L+ YR S I AN I+ N G+ K L + K + Sbjct: 327 FTGAKTIRLEQNYRSTSNILNAANSVIKNNTGRKGKTLWTEKGDGDKVHHYTAASEQDEA 386 Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 S + ++ + +L R + A +I Sbjct: 387 SHIADVIGEHLREGAHLRDHAVLYRMNAQSNPIETYFARAGIPYRI 432 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 67/185 (36%), Gaps = 29/185 (15%) Query: 510 EVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARY 569 E A I++ + L + + + L L+ + YA L+ + Sbjct: 534 EFAGEVIKKTG--YEAMLKAQKEEGETRL-----ENLGQLVSSVKTYADQNGEDATLSGF 586 Query: 570 HHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEA 629 + + + MTIH++KG + YV +VG+++G Sbjct: 587 LEEVALISDLDSYDQDADSVTMMTIHSAKGLEFPYVFVVGMEDGIFP------------G 634 Query: 630 LLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVP 679 + + EERRL YVA+TRA+ ++ ++ PS F+ + + Sbjct: 635 DMARYNEEDMEEERRLCYVAITRAKKELYLSTSRSRLIFGQTRRNLPSCFLSEIDPGLME 694 Query: 680 VARKP 684 + P Sbjct: 695 ETQSP 699 >UniRef50_A0LDC5 ATP-dependent DNA helicase, Rep family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDC5_MAGSM Length = 673 Score = 388 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 89/366 (24%), Positives = 153/366 (41%), Gaps = 47/366 (12%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 LN Q +AV + L+VLAGAGSGKT VL R W++ + +ASPE++L + F KA Sbjct: 6 LHHLNAPQRQAVTTLDGPLMVLAGAGSGKTRVLTRRLAWIIQQQQASPEEVLAVTFTNKA 65 Query: 254 AEEMDERIRERLHTEDI------TARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 A+EM R++ L + TFH ++ +++Q + ++ ++ E Sbjct: 66 AKEMRNRVQALLGLDAPAQAHRFWIGTFHGMSARMLRQYADRLGFERDFTILDSSDQERL 125 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 ++ F D +RL + RW Sbjct: 126 FKRLCEELG-------------------------FADAYWTPKRLTHTIGRWKDDGIRPQ 160 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR- 426 I A E R + + + ++ AL NA+DF L+ + + ++ Sbjct: 161 DLTDREIRKAWERAR---------IQQMYERYQQALLQSNAMDFGDLLLHCLQLWQQEPA 211 Query: 427 ----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 F ++++LVDE+QD + + + AL + L VGDD Q+IY + GA++ Sbjct: 212 ILAAFQQRFRYLLVDEYQDTNHVQYRWICALSGLH--QNLCVVGDDDQSIYSWRGARIEN 269 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD 542 F E+F + + L+ YR + I + A+ I N G+++K L + Sbjct: 270 ILKFEEDFPQTKIIRLEQNYRSSGNILKAASGLINHNKGRMEKQLWTEDAQGDAIHFYQA 329 Query: 543 ESQLDA 548 E+ D Sbjct: 330 ENDEDE 335 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 55/151 (36%), Gaps = 20/151 (13%) Query: 539 TLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASK 598 + D + + +D L R L + + + ++ T+HA+K Sbjct: 499 YVRDLEKGNDRIDNLDELRNALARTESLQLFLEEVALATDLQDGGPVANRVVISTLHAAK 558 Query: 599 GQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVW 658 G + +V +VG++E A E + EERRL YV +TRA+ R++ Sbjct: 559 GLEFPWVFLVGVEEDVMPHKLALTEQP----------EIGLEEERRLAYVGMTRAKQRLY 608 Query: 659 ALFNKENP----------SPFVEILKNLDVP 679 + S F++ L + Sbjct: 609 LTMARRRWLFNKPVMPIKSRFLKELPQEILE 639 >UniRef50_C8WP33 UvrD/REP helicase n=3 Tax=Coriobacteriaceae RepID=C8WP33_EGGLE Length = 813 Score = 387 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 84/416 (20%), Positives = 154/416 (37%), Gaps = 51/416 (12%) Query: 191 QVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFG 250 ++ LN Q AVV + LLVLAGAGSGKT VL R L+ + +P +IL + F Sbjct: 2 SIDIDSLNGPQREAVVTVDGPLLVLAGAGSGKTRVLTYRIANLIENHDVAPWEILAITFT 61 Query: 251 RKAAEEMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFI 308 KAA EM ER+ + + TFH++ + +++ ++K+ + Sbjct: 62 NKAAAEMRERLNGLVGPRCRGMWVSTFHSMCVRMLRSDAEKLGFTRNFTIYDTDDQKRLY 121 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 E + + L +R+ + + + Sbjct: 122 KEIMAELDIDPKRF-------------------------PVNALMNRISTAKNELVVPSA 156 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-- 426 + E K+ + + + LKA NA DF L+ A ++L+ Sbjct: 157 FEKEA-----------GDPVGKVASRVYSRLQERLKAANAFDFDDLLLYAYLLLKNHEDV 205 Query: 427 ---FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 + +++I+VDE+QD + + ++ L + + + VGDD Q+IY + GA + Sbjct: 206 RSAYQQRFRYIMVDEYQDTNHAQYSITGLLAEGHK--NIMVVGDDDQSIYSWRGADLRNI 263 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDE 543 F +++ L+ YR + AN I N + K L + K + Sbjct: 264 LEFEQDYPTAHTVKLEQNYRSVGNVLAAANAVIANNQHRKAKKLFTSAEDGDKIQVYMAA 323 Query: 544 SQLDA------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 + D ++K ++ + R + + +I T Sbjct: 324 DERDEGRWIAGEIEKQRAAGLSYNQVAVFYRTNAQSRMLEDMLLRAGVPYRIVGGT 379 Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 22/103 (21%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 + MT+H+SKG + D V + G++E + + EERR Sbjct: 599 DGHAVTMMTVHSSKGLEFDCVFVAGMEETLFPH------------MNSVGDAAGIEEERR 646 Query: 645 LMYVALTRARHRVWALFNKENP----------SPFVEILKNLD 677 L YVA+TRAR +++ S F++ + + Sbjct: 647 LAYVAITRARKKLFLTCAYARQIFGQTSSNPISRFIQEIPSEL 689 >UniRef50_D2RIV6 ATP-dependent DNA helicase PcrA n=6 Tax=Veillonellaceae RepID=D2RIV6_ACIFE Length = 750 Score = 387 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 84/411 (20%), Positives = 150/411 (36%), Gaps = 53/411 (12%) Query: 193 ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 + LN QA AV +L+LAGAGSGKT L + +LL +G P IL + F K Sbjct: 4 LLASLNEQQAEAVRQIAGPILILAGAGSGKTKALTTKIAYLLEKG-VKPWNILAITFTNK 62 Query: 253 AAEEMDERIRERLHT--EDITARTFHALALHIIQQGSKKV-PIVSKLENDTAARHELFIA 309 AA+EM +R+ + +D+ TFH ++++ + + + + + Sbjct: 63 AAKEMRQRVDALVGPSAKDVWLYTFHGFCNQLLRRDINALPGYTTSFSIYDPSDCKNVLK 122 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 E K+ + + L + + + Sbjct: 123 EALKKLNLDEKFYPLPG-------------------------LLATISNAKNAQV----- 152 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----K 424 A R K +A + ++ L NAVDF L+ + +L+ + Sbjct: 153 ------DAAAFARQAEDYHAKKVAEIYAEYQKHLVQSNAVDFDDLLLLTVKLLQTVPEVR 206 Query: 425 GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 ++ + + ++L+DE+QD + + L L + L AVGD Q+IY + GA +S Sbjct: 207 EKYQNKFHYVLIDEYQDTNHVQYLLAKLLSA--PENNLCAVGDIDQSIYGWRGADISNIL 264 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDES 544 F +++ + L+ YR I + AN I+ N + K L + + Sbjct: 265 DFEKDYPQARIFKLEQNYRSTQVILDAANEVIKHNAARRPKNLWTENGNGQPIAYYQARD 324 Query: 545 QLDA------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + + KL + IL R + E + Sbjct: 325 DREEAEFVVGQIRKLQREGTKLGDMAILYRTNAQSRMFEENLINNGVPYVM 375 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 42/104 (40%), Gaps = 22/104 (21%) Query: 586 KLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRL 645 + + MT+H++KG + V I G+++G + + E RRL Sbjct: 549 QDSVTLMTLHSAKGLEFPVVFIGGMEDGLFPSQRSLEDEDKLEEE------------RRL 596 Query: 646 MYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVP 679 YV +TRA+ R++ + PS F+E + + Sbjct: 597 CYVGITRAKKRLYLTNCRSRMVYGHVVMYPPSRFLEEIPRNLIE 640 >UniRef50_C0R0K3 ATP-dependent DNA helicase n=2 Tax=Brachyspira RepID=C0R0K3_BRAHW Length = 665 Score = 387 bits (993), Expect = e-106, Method: Composition-based stats. Identities = 90/405 (22%), Positives = 157/405 (38%), Gaps = 55/405 (13%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q +AV + + LL LAGAGSGKT V+ R +L+ G P QIL + F KAA E Sbjct: 5 LNEEQRQAVEHIDGPLLALAGAGSGKTRVITERIAYLIKHG-VLPSQILAVTFTNKAAAE 63 Query: 257 MDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M ERI + L + + TFH+ + +++ +K+ + +++ I ++ Sbjct: 64 MRERITKLLKEKPKQLVVSTFHSFCVRVLKGDIEKLGYKNNFSIYSSSDSRTLIRNILRE 123 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 + A +DR+ + + Sbjct: 124 IKINTLNYD-------------------------ENLFAWYIDRFKNNLMKP-------- 150 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRFIS 429 + K+ + + ++ LK NAVDF+ LI+ I + + ++ Sbjct: 151 -----YEVEPHDDLEKIAKRVYEVYQSYLKGYNAVDFNDLINLTIDLYVEFPEVLNKYQE 205 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 +++I+VDE+QD + + L L + + VGDD Q+IY F GA +S +F Sbjct: 206 RFRYIMVDEYQDTNFAQYKLTTLLASKYR--NIAVVGDDDQSIYAFRGADVSNILSFENE 263 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDA- 548 + + + L YR I E A+ I N + K + + + E + + Sbjct: 264 YPDAKIVTLTKNYRSTKAILEAAHSVISNNTQRKDKKVVAEGEEGIPPTIMPCEDEREEA 323 Query: 549 --LLDKLSGYAK----PEERILILARYHHMRPASLEKAATRWPKL 587 + D + Y+ E +L R + E R Sbjct: 324 QFVADSIINYSISKRLNYEDFAVLFRMNAQSRLFEEAFRLRGLPY 368 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 23/131 (17%) Query: 553 LSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQE 612 L + L + + E+ K I M+IHA+KG + YV I G+++ Sbjct: 520 LEYEKSNKNATLKNYLDRILLMSIEEQNDDEDKKKGIMLMSIHAAKGLEFPYVYICGMED 579 Query: 613 GSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN------- 665 G + E+ EERRL YVA+TRA+ + + + Sbjct: 580 GIMPHQKSLDEN-------------GLEEERRLCYVAMTRAKKHLTLTYCRSRTKMGKKV 626 Query: 666 ---PSPFVEIL 673 PS F+E + Sbjct: 627 ECTPSVFLEEM 637 >UniRef50_Q72IS0 DNA helicase uvrD n=3 Tax=Thermus thermophilus RepID=Q72IS0_THET2 Length = 692 Score = 387 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 102/406 (25%), Positives = 164/406 (40%), Gaps = 46/406 (11%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 +PLN AQ +AV++ E LV+AGAGSGKT +V R +L+AR P +IL + F Sbjct: 2 SDALLAPLNEAQRQAVLHFEGPALVVAGAGSGKTRTVVHRVAYLVARRGVFPSEILAVTF 61 Query: 250 GRKAAEEMDERIRERL-HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFI 308 KAAEEM ER+R + ++ TFHA AL I++ ++V + + Sbjct: 62 TNKAAEEMRERLRGLVPGAGEVWVSTFHAAALRILRVYGERVGLRPGFVVYDEDDQTALL 121 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 E K+ + + + + G Sbjct: 122 KEVLKELALSARPGP--------------------------------IKALLDRAKNRGV 149 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-- 426 ++ PE L R + +L ++ ALKA+ A+DF ++ A+ +LE+ Sbjct: 150 GLKALLGELPEYYAGLSRGR---LGDVLVRYQEALKAQGALDFGDILLYALRLLEEDEEV 206 Query: 427 ---FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 + I VDE+QD SP + L + + L AVGD Q IY F A + Sbjct: 207 LRLVRKRARFIHVDEYQDTSPVQYRFTRLLAGE--EANLMAVGDPDQGIYSFRAADIKNI 264 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDE 543 F ++ E L+ YR I AN I +N +L+K L + G + E Sbjct: 265 LDFTRDYPEARVYRLEENYRSTEAILRFANAVIVKNALRLEKALRPVKRGGEPVRLYRAE 324 Query: 544 SQLDA---LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPK 586 + + ++++ P +R +L R + + A R Sbjct: 325 DAREEARFVAEEIARLGPPWDRYAVLYRTNAQSRLLEQALAGRGIP 370 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 55/147 (37%), Gaps = 22/147 (14%) Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQAD 603 + L+ + + + L + + + + ++ MT+H +KG + Sbjct: 492 EDAEDRLENVEELLRAAKEAEDLQDFLDRVALTAKAEEPAEAEGRVALMTLHNAKGLEFP 551 Query: 604 YVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNK 663 V +VG++EG + EERRL YV +TRA+ R++ + Sbjct: 552 VVFLVGVEEGLLPHRNSVST------------LEGLEEERRLFYVGITRAQERLYLSHAE 599 Query: 664 E----------NPSPFVEILKNLDVPV 680 E PS F+E ++ V Sbjct: 600 EREVYGRREPARPSRFLEEVEEGLYEV 626 >UniRef50_B3QF13 UvrD/REP helicase n=9 Tax=Rhizobiales RepID=B3QF13_RHOPT Length = 848 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 96/454 (21%), Positives = 149/454 (32%), Gaps = 94/454 (20%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 S LNP Q AV + +LVLAGAG+GKT VL R +L+ G A P +IL + F KA Sbjct: 35 LSGLNPEQREAVETLDGPVLVLAGAGTGKTRVLTTRIAHILSTGRARPAEILSVTFTNKA 94 Query: 254 AEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 A EM R+ + L TFH++ I++ ++ V + S + + Sbjct: 95 AREMKLRLGQMLGQAVEGMPWLGTFHSIGGRILRYHAELVQLTSNFTVLDTDDQIRLLKQ 154 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 N D R LA +D W + Sbjct: 155 LL-------------------------AADNIDDKRWPARMLAGLIDGWKNRGLTPSQVP 189 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR---- 426 A A L ++ LK NA DF L+ + I + + Sbjct: 190 AGEAAMFGNGRGG----------KLYAQYQERLKILNAADFGDLLLENIRLFREHPDVLR 239 Query: 427 -FISPWKHILVDEFQDISPQRAALLAALRK------------------------------ 455 + + +K ILVDE+QD + + L L + Sbjct: 240 SYQNRFKFILVDEYQDTNVAQYMWLRLLSQTPSSSSLPGSTRQSISSQEDGSPGLAASRR 299 Query: 456 ---------------QNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDT 500 + VGDD Q+IY + GA++ F +F + L+ Sbjct: 300 PGDDVETSGNVVASTSAPPKNICCVGDDDQSIYGWRGAEVDNILRFDHDFPGAKVIRLER 359 Query: 501 TYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVT------LLDESQLDALLDKLS 554 YR I A+ I N G+L K L + + + + +++L Sbjct: 360 NYRSTGHILAAASHLIAHNEGRLGKTLRTEDVDGEMVTVTGAWDSEEEARAIGEEIEQLQ 419 Query: 555 GYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 I IL R ++ T + Sbjct: 420 RQGHALNEIAILVRASFQMREFEDRFVTLGLPYR 453 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 20/108 (18%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 + + MT+H++KG + + V + G +EG A E EERR Sbjct: 618 DEDAVSVMTLHSAKGLEFETVFLPGWEEGLFPHQRALDE----------QGRAGLEEERR 667 Query: 645 LMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVAR 682 L +V +TRAR R F PS F++ L +V + Sbjct: 668 LAHVGITRARKRAKLYFATNRRIHGTWNTTIPSRFLDELPAANVEITE 715 >UniRef50_D2R5I6 UvrD/REP helicase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5I6_9PLAN Length = 800 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 79/426 (18%), Positives = 148/426 (34%), Gaps = 58/426 (13%) Query: 189 FRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLA 248 R L AQ AV + E LL+LAG GSGKT V+ R W+LA G QIL L Sbjct: 18 LRSPLLDSLTDAQRAAVCHIEGPLLILAGPGSGKTRVVTHRVAWMLASG-IPARQILALT 76 Query: 249 FGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFI 308 F KAA+EM R+ + + TFH +++ ++ V + + Sbjct: 77 FTNKAADEMRGRLERLAPRQAVWMGTFHRFCARMLRSYAELVGLRENFSIYDTDDSRKIL 136 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 + +A + + + Sbjct: 137 QIALDEEGIDLTHTS-------------------------PDAIAQAISWAKNNLVT--- 168 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFI 428 A ++ + ++ + +AVDF L+ ++L++ + Sbjct: 169 --------ADRYEPRRGHAIGGIVEKVYPTYQKLMLRSSAVDFDDLLVHVAILLKENPEV 220 Query: 429 S-----PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 +++I+VDE+QD + + ++ AL + L GD Q+IY + GA +S Sbjct: 221 RRQLDERYRYIMVDEYQDTNLAQYTIVRALSIDHP--NLAVTGDPDQSIYGWRGANLSNI 278 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDK-------K 536 F +++ + + L+ YR I +A++ I+ N + +K L + Sbjct: 279 LEFEKDYPKVKVVRLEQNYRSTKSILHIADQLIRHNIRRKEKDLFTDNPQGNRVRLATFP 338 Query: 537 AVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHA 596 E+ + + ++ + I R + + + QI Sbjct: 339 TQRDEAETIAEEIAHEVRTGKRRPRDFAIFYRTNALSRQIEHALREQVIPYQIV------ 392 Query: 597 SKGQQA 602 G + Sbjct: 393 -NGLEF 397 Score = 82.3 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 47/141 (33%), Gaps = 22/141 (15%) Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQAD 603 + L+ LL S + L ++ + A ++ MT+HA+KG + Sbjct: 521 ANLEELLTAASEFDLRNPGGAGLEQFLEDSSLVADTDAFESDSDKVTMMTLHAAKGLEFP 580 Query: 604 YVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNK 663 V IV +EG + R+ E + +V +TRA + + + Sbjct: 581 AVYIVACEEGLLPHERSRRDEEKLEEERRLL------------FVGITRAMQDLTLTWAQ 628 Query: 664 ENP----------SPFVEILK 674 S F+ L Sbjct: 629 YRMFRGQQAPAVASSFLMELP 649 >UniRef50_Q6MI36 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MI36_BDEBA Length = 762 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 84/412 (20%), Positives = 160/412 (38%), Gaps = 53/412 (12%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 + LNPAQ AV E LL+LAGAGSGKT VL R ++ +G A+ ++IL + F KA Sbjct: 8 TKNLNPAQKDAVETLEGPLLILAGAGSGKTRVLTHRMANMIGQGVAASDEILCVTFTNKA 67 Query: 254 AEEMDERIRERLHT------EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 A+EM+ RI + L + TFH+ + +++Q + ++ Sbjct: 68 AKEMEHRIYKILSDMGAVVQTQLWISTFHSFCVRVLRQHITLLDYKPFFGIYDSSDQLSQ 127 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 I + + D + SR+ + Sbjct: 128 IKKVMTAL-------------------------DINDKMYPAKNFQSRISSAKMMGLSPE 162 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR- 426 G + + + + KA++ +K N++DF L+ + + Sbjct: 163 GLE-----------KSSKRLMDQKTVEVYKAYEREMKKANSLDFDDLLLKTYDLFRMYPD 211 Query: 427 ----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + +++I+VDE+QD + + L+ L + L VGD+ Q+IY + GA + Sbjct: 212 VLQMYQKKFRYIMVDEYQDTNHIQYLLVQMLASAHR--NLCVVGDEDQSIYSWRGADIKN 269 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD 542 F ++F + + L+ YR ++ I A I+ N + K L + + + Sbjct: 270 ILDFEKDFRDAKVIKLEENYRSSANIVNGATAVIKNNSQRKDKTLFTSNDPGDLIHVREE 329 Query: 543 ESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTI 594 +++ + AK + ++ + A + + L+ T+ Sbjct: 330 KNEYEEG----RFVAKTIQSMMNEGEGSYNDYAIFYRTNAQSRVLEEQLRTM 377 Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 57/150 (38%), Gaps = 20/150 (13%) Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQAD 603 L+ L + ++ + + L + + + + + MT+H SKG + Sbjct: 514 ENLEELDNAIAQFVQERGEESTLISFLEEMALVNDVDSLDQEQNSVTMMTLHISKGLEYP 573 Query: 604 YVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNK 663 YV +VGL+E +A + EERRL YV +TRAR ++W + K Sbjct: 574 YVFVVGLEENLFPSARSAESDN----------EQDVEEERRLAYVGMTRARQKLWLTYAK 623 Query: 664 EN----------PSPFVEILKNLDVPVARK 683 PS F++ + + Sbjct: 624 MRRVWGQEQFNPPSRFIKEIPQNLIDFKTS 653 >UniRef50_Q5PB91 DNA helicase II n=20 Tax=Rickettsiales RepID=Q5PB91_ANAMM Length = 671 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 91/407 (22%), Positives = 157/407 (38%), Gaps = 47/407 (11%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN Q AV + +L+LAGAG+GKT + +R G+++ RG A P QIL + F KAA Sbjct: 36 SLNEEQKEAVFCVDGPVLILAGAGTGKTRTITSRMGYIIKRGLAFPSQILAVTFTNKAAR 95 Query: 256 EMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQC 315 EM R+ E + T I TFHA+A I++ +++V + I Sbjct: 96 EMLVRVSEIVDTTGIWLGTFHAIAARILRSNAERVGLRRDFTVIGPDDQLQLIKAIVNDT 155 Query: 316 SEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIA 375 + +++ + RW + G + Sbjct: 156 QPG-------------------------HPAEECKKMMHAIQRWKEKGLLPAGVTDTELQ 190 Query: 376 SAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RFISP 430 P ++ + ++ LKA N DF L+ + + + Sbjct: 191 KCP-----------NIVRDVYYEYQERLKALNCADFGDLLLYNVSMFSAHADVLSHYQEQ 239 Query: 431 WKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENF 490 +K+++VDE+QDI+ + L + ++ + + VGDD Q+IY + GA++ F ++F Sbjct: 240 FKYVMVDEYQDINTVQYLWLRLIVQK--RKNICCVGDDDQSIYSWRGAEVGNILRFADDF 297 Query: 491 GEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKA--VTLLDESQLDA 548 E + L+ YR S I A+ I N +L K L + + +K + D Sbjct: 298 PEAKIVRLECNYRSTSNILCAASAIINNNKSRLGKKLWTTNHAGQKVGLMKFWDGRMEAQ 357 Query: 549 LLDKLSGYAKPE--ERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 + + + + IL R E +I T Sbjct: 358 FISEYIKGSSEYRFDETAILVRAGFQTRVFEEYLVRCGIPYKIIGST 404 Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 50/146 (34%), Gaps = 20/146 (13%) Query: 547 DALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVI 606 + ++ + ++ E + + MT+HA+KG + V Sbjct: 526 ASKIENIRELFAAVGNFENATKFLEHISLVTEVDSPEQANNHVYLMTLHAAKGLEFPLVF 585 Query: 607 IVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALF----- 661 + G +EG + +S EERRL YV +TRAR +++ Sbjct: 586 LPGWEEGVFPHEKSIHDSTGN----------ALEEERRLAYVGMTRAREQLFISCVAVRE 635 Query: 662 -----NKENPSPFVEILKNLDVPVAR 682 S F++ L V V + Sbjct: 636 VNNWRQPMKISRFIKELPAEHVQVLK 661 >UniRef50_D1NAY9 UvrD/REP helicase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NAY9_9BACT Length = 679 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 88/425 (20%), Positives = 161/425 (37%), Gaps = 62/425 (14%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 LNP QA A +LVLAGAG+GKT V+ R ++LA G P+ IL + F KA Sbjct: 7 LKQLNPEQASAAGTVNGPVLVLAGAGTGKTRVITFRIAYMLACG-IPPQMILGMTFTNKA 65 Query: 254 AEEMDERIRERLHT---EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 A EM ER+ + + +T TFH+ + I+++ K+ + + + + + Sbjct: 66 AREMRERLAQLVQPQIARKVTLGTFHSFCIKILRRDIAKLGYLPSFTIADESDQQGVLKQ 125 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 Q + + S + RW + + A+ Sbjct: 126 AAGQLG-------------------------CNYEGFPLGEVQSMIGRWKNKLFFPEDAR 160 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR---- 426 R + A L + ++ L+ +N++DF ++ + + Sbjct: 161 -----------RHADTTFEATAAQLYEEYQTLLEMQNSLDFDDMLLLVYRLFTEHPDVLE 209 Query: 427 -FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 + ++++L+DE+QD + + ++ L + L VGDD Q+IY + GA +S Sbjct: 210 RYRETYQYLLIDEYQDTNAAQFTIVKLLT--GDRCNLCVVGDDDQSIYSWRGADISNILG 267 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQ 545 F ++F + L+ YR + I AN I N + +K L S + + E+ Sbjct: 268 FPDHFPGAKVVKLEQNYRSTTSILNAANVVIGSNANRHEKQLWSNLGDGEPVKIVTTENG 327 Query: 546 LDA--------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHAS 597 K + IL R +H+ + + ++ Sbjct: 328 ESEAEFIGSMITQMKNDKPELRYQDFAILYRSNHLSRQLEQTLRRQQIPYRLVG------ 381 Query: 598 KGQQA 602 GQ+ Sbjct: 382 -GQEF 385 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 30/107 (28%), Positives = 43/107 (40%), Gaps = 23/107 (21%) Query: 587 LQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLM 646 + MT+HASKG + V +V ++ A E + EE RL Sbjct: 559 DAVTLMTVHASKGLEFPVVFVVAMERNIFPHERALEEGSV-------------EEELRLF 605 Query: 647 YVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVARK 683 YVA+TRAR ++ L KE PSPF+ +L + Sbjct: 606 YVAITRARKYLYLLRAKERMQRGITRATLPSPFLHLLTDEVAERTTP 652 >UniRef50_Q04T79 ATP-dependent DNA helicase n=6 Tax=Leptospira RepID=Q04T79_LEPBJ Length = 730 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 90/407 (22%), Positives = 159/407 (39%), Gaps = 52/407 (12%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN Q +AV+ +L+LAGAGSGKT V+ R LL +I L F KAA Sbjct: 8 GLNEEQKKAVLQITGPVLILAGAGSGKTRVITHRIANLLVNHGID--RICALTFTNKAAA 65 Query: 256 EMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM ER++ + ++ +TFH+L L+I+++ + S E + + K Sbjct: 66 EMVERVKNLVPFLPTNLQIKTFHSLCLYILRREAFFFGFDSAFTVYDTTLQESLLKQVVK 125 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 S K S L ++S ++ + Sbjct: 126 DLSLDPKFYK-----------------------------PSMLGNYISGLKDKMLSPETY 156 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FI 428 + ++ + K ++ + K ++ A A DF LI + + + +K + Sbjct: 157 LE------KEGRTDFSKTVSAIYKEYEKRKDANRAFDFGDLIWKTVQLFQKSPDAIAKYR 210 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 W++++VDE+QD + + L+ L + + L VGDD Q+IY + GA + F + Sbjct: 211 HKWEYVMVDEYQDTNKVQYQLVLLLAGE--KRNLCVVGDDDQSIYSWRGADIGNILNFEK 268 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDA 548 +F E L+ YR +S I A++ I N + +K + + V E++ + Sbjct: 269 DFPESTVIKLEENYRSSSNIILAASKVISNNTQRKQKEIFTNNPKGSPVVLNEFENESEE 328 Query: 549 ------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + Y + I I R + E +I Sbjct: 329 AHGVITRIRSAYSYGTEYKNIAIFYRTNSQSRYFEEALRNLGIPYKI 375 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 67/160 (41%), Gaps = 22/160 (13%) Query: 527 LNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPK 586 L S + ++ L L++ + Y K + + + + + E+ + Sbjct: 488 LVSHLRDEGTEESIARLENLQELVNSIEEYEKNSDSPSLEEYLNQISLITSEEESKELTD 547 Query: 587 LQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLM 646 ++ MT+H +KG + V + GL+EG+ + +S F D EERRL Sbjct: 548 Y-VNLMTVHNAKGLEFKIVFLSGLEEGTFPHSMSLEDS-----------HFGDEEERRLF 595 Query: 647 YVALTRARHRVWALFNKEN----------PSPFVEILKNL 676 YVALTRAR +++ + + + PS F+ + Sbjct: 596 YVALTRAREQLFLSYCRTSRKFGKVEDRIPSRFLSEIPEE 635 >UniRef50_A9ETX5 ATP-depentend DNA helicase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9ETX5_SORC5 Length = 820 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 93/417 (22%), Positives = 150/417 (35%), Gaps = 55/417 (13%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 + LN QARA + LL+ AGAGSGKT V+V R L+ P +IL + F Sbjct: 19 LPYEELNEPQARAASHAAGPLLIFAGAGSGKTRVIVYRIANLIVTHRVPPYRILAVTFTN 78 Query: 252 KAAEEMDERIRERLHT---EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFI 308 KAA EM R+ + +D+ TFHA+ ++++ + + + Sbjct: 79 KAATEMKRRLEGLIGPDIVKDLWVGTFHAVCARLLRRHHEAAGLDKNFIIYDDDDQRAVM 138 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 K+ N D R++ SR+ R Sbjct: 139 NRVLKEL-------------------------NLDDRRYPPRQVLSRIHAEKQEGRGPAE 173 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK---- 424 + + +A +A++ LKA +AVDF L+ + I E Sbjct: 174 FERK-------------GYFDDAIARCFEAYERHLKAASAVDFDDLLLAVLRIAEDPTSY 220 Query: 425 --GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 ++H+LVDEFQD++ + L+ A K + L VGDD Q+IYR+ GA + + Sbjct: 221 AGEDLRGRFRHVLVDEFQDVNQVQYRLVRAFCKSHD--NLCVVGDDDQSIYRWRGADVRI 278 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL-- 540 F +F L+ YR + A I+ + K L + + Sbjct: 279 VRGFRRDFPHATVVKLEQNYRSIGHVVRGALGVIRHASDREPKELWTANQDGAPIDVVAA 338 Query: 541 ----LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 + + + + +L I + R H E QI T Sbjct: 339 DSEHDEAAWVVECVRELIAEGVSPNEIAVFYRIHAQSRVLEEVLREARIPYQIIGGT 395 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 65/185 (35%), Gaps = 25/185 (13%) Query: 510 EVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARY 569 +A + ++ K L + + +A + +L+D + + Sbjct: 506 ALAEEVLARSG--YAKALEQEDSVESEARLQNLRELVQSLVDYEQEATAAGDEATLAGYL 563 Query: 570 HHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEA 629 + S A P ++ MTIHA+KG + V + G++E F + Sbjct: 564 ERVSLVSDVDALADVP--KVAMMTIHAAKGLEFHAVFLTGMEEDLFPFRS---------- 611 Query: 630 LLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVP 679 P EERRL YVA+TRAR R+W PS F+ L V Sbjct: 612 -QDPNRKGDIEEERRLAYVAITRARERLWITHAARRAIFGQTRYGLPSRFLADLPPASVR 670 Query: 680 VARKP 684 P Sbjct: 671 PIATP 675 >UniRef50_A6DKH4 UvrD/REP helicase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DKH4_9BACT Length = 674 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 99/418 (23%), Positives = 171/418 (40%), Gaps = 51/418 (12%) Query: 191 QVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFG 250 V LN Q +AV E LL+LAGAG+GKT V+ +R +++ G A P +IL + F Sbjct: 2 SVLLDRLNDEQRQAVTTTEKPLLILAGAGTGKTMVVTSRIAFIVQSGRAEPGEILAVTFT 61 Query: 251 RKAAEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 KAA EM ER + +D+ TFH+ + I+++ + + Sbjct: 62 NKAANEMKERAGRLIGQKAVKDLWVSTFHSFGMKILRKYAYQAGYAPDFTLAEYGDQVGL 121 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 I + + E + + +S+ + Sbjct: 122 IKQGLNELGL---------------------------VEDGMSQDPKAILSLISMAKAKN 154 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR- 426 PE++ + + + + + ++ L A N +DF L+ + +L+K Sbjct: 155 QV--------PEDLEESSDPWEQRIGGIYRYYQEYLHALNILDFDDLLMLTVRLLQKDEK 206 Query: 427 ----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 +K+++VDEFQD + + LL AL ++ + + VGDD Q+IY + GA+++ Sbjct: 207 VRQLLQDKFKYVMVDEFQDTNHIQMELLHALLPKH-EPNICVVGDDDQSIYSWRGAEVAN 265 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD 542 AF + F G+ L+ YR N+ I AN+ I N + K L S G +K + Sbjct: 266 ILAFPQIFPGGKLIKLEQNYRSNNVILNAANKVISINSQRHVKNLWSAQEGGEKLKVVAC 325 Query: 543 ESQLDA-------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 S+ +L+K++G IL R +H A + +I T Sbjct: 326 GSEEREAKAIADTILNKVNGRQNTYGDCAILYRSNHQSRALEDAMRRGRIPYKIIGDT 383 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 50/151 (33%), Gaps = 23/151 (15%) Query: 539 TLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASK 598 + ++ ++ K + + + + +T+HASK Sbjct: 510 RYQNVLEIIHTIEGREKEDKRCIPLQEYLESVSLMEEYRRRQEKDEDPNAVMLLTVHASK 569 Query: 599 GQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVW 658 G + V + G+++ + AEERRL YVALTRA+ + Sbjct: 570 GLEFPSVFVTGMEKNLFPHEKS-------------AGLKALAEERRLFYVALTRAKSDLI 616 Query: 659 ALFNKEN----------PSPFVEILKNLDVP 679 ++K PS F+ L V Sbjct: 617 LTWSKMRKAGRRMSQRMPSQFLGELPKDLVD 647 >UniRef50_A6VEA1 ATP-dependent DNA helicase Rep n=102 Tax=Proteobacteria RepID=A6VEA1_PSEA7 Length = 706 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 100/429 (23%), Positives = 165/429 (38%), Gaps = 55/429 (12%) Query: 180 AMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEA 239 + + FR S LNP Q AV LLVLAGAGSGKTSV+ + +L+ + Sbjct: 24 RIRARFDPLFRPAPMSRLNPRQQEAVNYVGGPLLVLAGAGSGKTSVITRKIAYLVQQCGI 83 Query: 240 SPEQILLLAFGRKAAEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKL 296 + I+ + F KAA EM ER+ L +T TFH L L+II++ +++ Sbjct: 84 RAQYIVAVTFTNKAAREMKERVGSLLRGGEGRGLTVSTFHNLGLNIIRKEHERLGYKPGF 143 Query: 297 ENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRL 356 + + + + + + + + + Sbjct: 144 SIFDESDIKALLTDIM---------------------------QKEYSGDDGVDEIKNYI 176 Query: 357 DRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIH 416 W + + + E + + R + A + ++ L+A NAVDF LI Sbjct: 177 GAWKNDLILP-----------EEALEKARNPREQTAAIVYLHYQRTLRAYNAVDFDDLIL 225 Query: 417 QAIVILEKGR-----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQA 471 Q + + ++ + + +++LVDE+QD + + L+ L K +Q VGDD Q+ Sbjct: 226 QPVKLFQEHPDILQKWQNRVRYMLVDEYQDTNASQYLLVKLLVKDRAQ--FTVVGDDDQS 283 Query: 472 IYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLT 531 IY + GA+ E+F + L+ YR SRI + AN I NP +K L S Sbjct: 284 IYAWRGARPENLMQLKEDFPSLKVVMLEQNYRSTSRILKCANVLIANNPHVFEKQLWSEM 343 Query: 532 NGDKKAVTLL-------DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRW 584 + E +L +P IL R +H K Sbjct: 344 GHGDPIRVIRCRNEDAEAERIAMEILTLHLRTERPYSEFAILYRGNHQAKLMELKLQHHQ 403 Query: 585 PKLQIDFMT 593 ++ T Sbjct: 404 IPYRLSGGT 412 Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 62/182 (34%), Gaps = 27/182 (14%) Query: 514 RFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEER----ILILARY 569 ++ + N V S + L++ L + +E I Sbjct: 511 AVLRSMVMDIDYENWLRQNASSDKVAEFRMSNVWFLIEALKNTLERDEEGDMTIEQAIAK 570 Query: 570 HHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEA 629 +R + + MT+HASKG + YV I+G++E ++ + Sbjct: 571 LVLRDMLERQQEEEEGAEGVQMMTLHASKGLEFPYVFIMGMEEEILPHRSSIEADTV--- 627 Query: 630 LLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVP 679 EERRL YV +TRAR + F + PS F++ L D+ Sbjct: 628 ----------EEERRLAYVGITRARQNLAMTFAAKRKQYGEIIDCSPSRFLDELPPEDLE 677 Query: 680 VA 681 Sbjct: 678 WE 679 >UniRef50_Q2GE51 Helicase, UvrD/Rep family n=2 Tax=Neorickettsia RepID=Q2GE51_NEOSM Length = 630 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 91/413 (22%), Positives = 160/413 (38%), Gaps = 47/413 (11%) Query: 187 DFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILL 246 D Q LN Q AV +L+LAGAG+GKT LV R L+ G A P QI+ Sbjct: 6 DHLAQSTIMNLNDEQRLAVETVNGPVLILAGAGTGKTKTLVHRIAHLIRSGYAHPNQIMA 65 Query: 247 LAFGRKAAEEMDERIRERLHTEDI-TARTFHALALHIIQQGSKKVPIVSKLENDTAARHE 305 + F KAA EM +R+ E + TFHA A I++ ++K+ Sbjct: 66 VTFANKAANEMIQRVNEIVGEMKFHWIGTFHAAAAKILRIEAEKLGFKPDFTILDVDDQV 125 Query: 306 LFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRM 365 + + ++ + D+ L ++ S + W Sbjct: 126 RMLQKVAQEKKIEA-------------------------DKALLKKYLSVISAWKDKAFT 160 Query: 366 HGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG 425 + A+ + K + ++ LK N++DF L+ + + K Sbjct: 161 PSRVRFNNAAN---------TWFEKQALSVYDTYQKKLKENNSMDFGDLLMHNVTLFNKD 211 Query: 426 -----RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQM 480 ++ +++I+VDE+QD + + L L +++ + + VGDD Q+IY + GA++ Sbjct: 212 AETLEKYKEKFRYIMVDEYQDTNLCQYLWLRLLAQKH--SNICCVGDDDQSIYGWRGAEV 269 Query: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL 540 F ++F + L+ YR ++I A+ I+ N +L K L + G ++ Sbjct: 270 GNILRFAKDFEGAKVIKLEQNYRSTNKILTAAHNIIKNNQSRLTKKLWTAYPGGEEIQIF 329 Query: 541 LD---ESQLDALLDKLSG--YAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 E + A++ + IL R A E A + Sbjct: 330 TYMDSEQEARAIIRMIKERKLLCRYSDTAILVRAGFQTRAFEEAAIHENVPYR 382 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 47/143 (32%), Gaps = 22/143 (15%) Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQAD 603 Q + ++ + + + + E A ++ MT+HASKG + + Sbjct: 500 EQDETRIENVDELFRVIQEFDDATDFLQHVSLLTESDAQINNSDAVNMMTLHASKGLEFE 559 Query: 604 YVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNK 663 V + G ++G+ + EERRL YV +TRA+ + Sbjct: 560 QVFLPGWEDGTFPH------------VRSLCSTEQIEEERRLAYVGITRAKRFLTITSAH 607 Query: 664 EN----------PSPFVEILKNL 676 S F+ L Sbjct: 608 RRLIRNSWQNTVKSRFMLELAEK 630 >UniRef50_C5VHV2 ATP-dependent DNA helicase PcrA n=20 Tax=Bacteroidales RepID=C5VHV2_9BACT Length = 851 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 89/415 (21%), Positives = 159/415 (38%), Gaps = 48/415 (11%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 + S LN +Q AV LV+AGAGSGKT VL + +LL P IL L F Sbjct: 7 EEAILSALNESQREAVEYCTGPSLVIAGAGSGKTRVLTYKIAYLL-NKGLKPWNILALTF 65 Query: 250 GRKAAEEMDERIRERLHTED---ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHEL 306 KAA EM ERI + +D + TFH++ I+++ + + S Sbjct: 66 TNKAAREMKERIAQITTAKDAQHLYMGTFHSIFARILRREGEAIGFGSNFTIYDENDSRS 125 Query: 307 FIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMH 366 I K + K + + + + + Sbjct: 126 LIKSIVKALDLDEKTYK-------------------------PASVHNFISMAKNHLITA 160 Query: 367 GGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR 426 + A I S R+ + + KA++ + NA+DF ++ ++ + Sbjct: 161 SEYAEDRAA-----IERDRSARMPAIHMIYKAYEARCRQANAMDFDDILLYTFLLFRDNK 215 Query: 427 -----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMS 481 + +++ILVDE+QD + + ++++ L + + + + VGDD+Q+IY F GA + Sbjct: 216 EIREKYGQQFEYILVDEYQDTNYAQVSIISQLAETHRR--ICVVGDDYQSIYSFRGANID 273 Query: 482 LTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL 541 F F + + L+ YR I + AN ++ N Q+ K + S K + Sbjct: 274 NILDFKHKFDDAKLFKLERNYRSTQLIVQAANSLMKHNERQIPKDVFSKEAEGDKILYKP 333 Query: 542 DESQLDA------LLDKLSGY-AKPEERILILARYHHMRPASLEKAATRWPKLQI 589 S + L ++ IL R + + ++ + +I Sbjct: 334 CYSDREEAMVVANELKRIKRNDDCDYGNFAILYRTNAQSRSFEDEFRKQGIPYKI 388 Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 45/128 (35%), Gaps = 22/128 (17%) Query: 564 LILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARE 623 + L Y + ++ MTIHA+KG + V +VGL+E P +A Sbjct: 545 VYLTDYLQEVALYTDADKEDDDTPKVTLMTIHAAKGLEFPTVFVVGLEENIFPSPMSAS- 603 Query: 624 SIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEIL 673 EERRL+YVA+TRA K PS F+ Sbjct: 604 -----------SKREIEEERRLLYVAITRAERHCILTNAKNRFRYGSMQVDNPSRFLNDF 652 Query: 674 KNLDVPVA 681 + V Sbjct: 653 DPALIHVE 660 >UniRef50_D0LIZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LIZ3_HALO1 Length = 688 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 89/415 (21%), Positives = 148/415 (35%), Gaps = 56/415 (13%) Query: 191 QVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFG 250 ++ + LN Q AV++G +LVLAGAGSGKT V+ R LL G P+ I L F Sbjct: 3 NMDLAKLNTPQREAVLHGSGPVLVLAGAGSGKTRVITYRIVRLLRSG-IPPQAIAALTFT 61 Query: 251 RKAAEEMDERIRERLHTED----ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHEL 306 +AAEEM ER+ L +T TFH+L L I++ + + + Sbjct: 62 NRAAEEMRERVAALLGDRKTASMLTMGTFHSLGLRILRSEHEAMGYPRGFVIYDTSDQLG 121 Query: 307 FIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMH 366 + E + + R + +R+ + Sbjct: 122 VVRELLRGIDAGR--------------------------RFDVRAILTRISLAKNAFVFP 155 Query: 367 GGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE--- 423 E + + + ++ A + ++ AL+A AVDF L+ + + + Sbjct: 156 -----------EEYVPNGDDEYDEITAEVYPRYQEALRAYAAVDFDDLLTATVRMFDQRD 204 Query: 424 --KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMS 481 + R+ ++ ++VDE+QD + + + L ++ L VGDD Q+IY + GA + Sbjct: 205 DVRARWQEKFRFVMVDEYQDTNRAQLKFVKTLVAEHE--NLCVVGDDDQSIYSWRGADPT 262 Query: 482 LTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL 541 F F L+ YR I AN I N + K L S K V Sbjct: 263 NILHFDRMFPGARVIKLEQNYRSTPTILRAANAVIANNVNRHGKNLWSDIADGAKIVHAS 322 Query: 542 DESQLDALLDKLSGYAK-------PEERILILARYHHMRPASLEKAATRWPKLQI 589 + +L R + E + + Sbjct: 323 ATDTESEARFVAREIGDIVGTDNLRYRDVAVLYRSNIQSRLIEESLRSASIPYVM 377 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 71/184 (38%), Gaps = 16/184 (8%) Query: 506 SRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILI 565 +RI +V R I + S + + +++LL L + + + Sbjct: 480 ARIIDVTRRLIDEIQLYDDLRNASPSAAAAQRRI----DNVESLLRSLERHQEKRPGLGA 535 Query: 566 LARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESI 625 LA Y ++E A P ++ T+H +KG + V ++GL+E A Sbjct: 536 LAEYLRRLSLAVESEAGEDPGNKVVLTTLHGAKGLEFPIVFMIGLEEEILPH--ARTLKP 593 Query: 626 MEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKN 675 ++ +EERRL YV +TRA+ +++ + PS F++ + Sbjct: 594 QATDVMDLDHVTDVSEERRLAYVGITRAQRKLYLTRTQVRVSRGKNLPRTPSRFLQEIPA 653 Query: 676 LDVP 679 + Sbjct: 654 ELLE 657 >UniRef50_A0M3U3 PcrA-like UvrD/Rep family ATP-dependent DNA helicase n=28 Tax=Bacteroidetes RepID=A0M3U3_GRAFK Length = 787 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 89/414 (21%), Positives = 162/414 (39%), Gaps = 48/414 (11%) Query: 191 QVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFG 250 + + LN AQ V+ + ++V+AGAGSGKT VL R +L+ +G IL L F Sbjct: 16 EAYLAELNDAQRAPVLQKDGPMIVIAGAGSGKTRVLTYRIAYLMNQG-VDAFNILSLTFT 74 Query: 251 RKAAEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 KAA EM +RI + + +++ TFH++ I++ + K+ S Sbjct: 75 NKAAREMKQRISKIVGSSEAKNLWMGTFHSVFAKILRFEADKMGYPSNFTIYDTQDSHSV 134 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 I K+ K K +++ +R+ + + + Sbjct: 135 IRAIIKEMRLDKDVYK-------------------------YKQVYNRISSYKNSLITV- 168 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK--- 424 + PE + + + KA+ A+DF L+ + +L + Sbjct: 169 ----KAYFQNPELQEADAMSKKPRLGEIYKAYVDRCFKAGAMDFDDLLLKTNELLNRFPE 224 Query: 425 --GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 ++ S +K+ILVDE+QD + + ++ AL + + VGDD Q+IY F GA ++ Sbjct: 225 VLHKYQSRFKYILVDEYQDTNHSQYLIVRALSDK--FQNICVVGDDAQSIYAFRGANINN 282 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVT--- 539 F +++ + L+ YR + I E AN I +N +L K + + K + Sbjct: 283 ILNFQKDYDNVQMYRLEQNYRSSKNIVEAANSIIDKNQTKLDKIVWTANEDGPKIIVNRL 342 Query: 540 ----LLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 ++ + IL R + A + + +I Sbjct: 343 LTDGEEGRYVASSIFENKMQNQMDNGDFAILYRTNAQSRAMEDALRKKDIPYRI 396 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 59/161 (36%), Gaps = 22/161 (13%) Query: 526 PLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWP 585 L + A E L+ + D + G + + L+ + + + Sbjct: 514 ELKKDGTPEGIARIENIEELLNGMRDFVEGQKELADATGSLSEFLEDVALATDLDNDTGD 573 Query: 586 KLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRL 645 ++ MTIH +KG + YV IVG++E + + EERRL Sbjct: 574 DDRVALMTIHLAKGLEFPYVYIVGMEEDLFP------------SGMSMNTRSELEEERRL 621 Query: 646 MYVALTRARHRVWALFNKEN----------PSPFVEILKNL 676 YVA+TRA + + + PS F+E + + Sbjct: 622 FYVAITRAEKQAYLTYTLSRYRWGKLVDAEPSRFIEEIDDQ 662 >UniRef50_C6NTI8 ATP-dependent DNA helicase UvrD/PcrA n=2 Tax=Gammaproteobacteria RepID=C6NTI8_9GAMM Length = 729 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 91/405 (22%), Positives = 157/405 (38%), Gaps = 53/405 (13%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN Q AV+ LVLAGAGSGKT VL++R LL G P +IL + F KAA Sbjct: 20 QLNDQQREAVLLPPGPALVLAGAGSGKTRVLISRIAHLLEEG-VRPAEILAVTFTNKAAR 78 Query: 256 EMDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 M ER+ + + + TFH +A ++++ ++ + + + + + + + + Sbjct: 79 SMRERLAALVQVDLAPLWMGTFHGIAHRLLRRHAEALGLPADFQVLDSDDSQRLVRRALR 138 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 + + Q R LA+++ RW A Sbjct: 139 ELGLDEKQ-------------------------WTPRALAAQIGRWKDEGWTPAQVPARE 173 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG----RFIS 429 + R + + + ++ + VDF+ L+ A+ + ++ + Sbjct: 174 VG------------RWTIPVQVYERYERIKERGGLVDFADLLLYALRLWDQDGILEHYRE 221 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 ++H+LVDEFQD + + L L LF VGDD Q+IY + GA++ F E+ Sbjct: 222 RFQHVLVDEFQDTNAVQYTWLRRLAAHGR---LFVVGDDDQSIYAWRGARVENLLRFAED 278 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL------LDE 543 F L+ YR ++ I AN I N +L K L + +G + + Sbjct: 279 FPGAALVRLEQNYRSSAPILAAANAVIAHNAERLGKTLWTAQDGGEPLELYAAYNEEDEA 338 Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 + A + + E IL R + E + Sbjct: 339 RFVVAQIQQWVAQGGRREDCAILYRSNAQSRVFEEILVREGVPYR 383 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 71/189 (37%), Gaps = 26/189 (13%) Query: 509 GEVA-NRFIQQNPGQ--LKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAK-PEERIL 564 + A R I+ + + + + L++ ++ A +++ + + Sbjct: 476 LDAAVQRVIEVTGLRDWYARDGDRNEGRLENLDELINAARAYAFVEEREALRELNPDPGN 535 Query: 565 ILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARES 624 L+ + + A+ + + M++H++KG + V +VGL+EG + Sbjct: 536 RLSEFLTHAALEAGEGASDAWEDAVQLMSLHSAKGLEFPVVFLVGLEEGLFPHQRSLE-- 593 Query: 625 IMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILK 674 + AEERRL YV +TRA R+ + + PS F+ L Sbjct: 594 ----------DADGLAEERRLCYVGMTRAMRRLVLCYAESRRLHGSERASLPSRFLRDLP 643 Query: 675 NLDVPVARK 683 + V R Sbjct: 644 SDLVRELRP 652 >UniRef50_Q4FPM1 DNA helicase II n=5 Tax=Bacteria RepID=Q4FPM1_PELUB Length = 678 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 99/414 (23%), Positives = 163/414 (39%), Gaps = 52/414 (12%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 + LN AQ AV+ + LL++AGAGSGKT VL +R ++ +A P QIL + F KA Sbjct: 7 LNNLNNAQKEAVLYLDGPLLIVAGAGSGKTKVLTSRIAHIINEKKAFPNQILSVTFTNKA 66 Query: 254 AEEMDERIRERLHTEDI---TARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 A+EM R+ L++E I TFH++ ++++ + + S I Sbjct: 67 AKEMQNRVSSILNSEAIGLSWLGTFHSICAKLLRKHAPAAGLTSNFTIIDTDDQVRLIKN 126 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 K + Q + + S +DRW + Sbjct: 127 ICKAENIDIKQL-------------------------APKFILSIIDRWKNKGFHPD--- 158 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR---- 426 E + + + + PL K ++ L NA DF LI + ILEK Sbjct: 159 --------EVVINKNDIFERTIRPLYKIYQQKLLDLNACDFGDLILHVVKILEKNHDIRN 210 Query: 427 -FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 + + +K+ILVDE+QD + ++ L L +++ L VGDD Q+IY + GA++ Sbjct: 211 IYSNNFKYILVDEYQDTNYIQSRWLNLLSEKHK--NLCCVGDDDQSIYSWRGAEIKNFLE 268 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL---- 541 F + + + L+ YR + I VA+ I N ++ K L + Sbjct: 269 FDQVYKNSKVIRLEENYRSSQNILSVASNLIANNQNRVGKTLKTTMEEGDLVKLNCFKNG 328 Query: 542 --DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 + + ++K I IL R E+ +I T Sbjct: 329 KDEAIGVSDEIEKKLKKKYSFNNIAILVRAIFQTREFEERFLKIGLPYRILGGT 382 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 57/171 (33%), Gaps = 21/171 (12%) Query: 516 IQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPA 575 I++ L +G + + + + L+ + + L + A Sbjct: 476 IKKINHVKLLQLVLDESGYSSMLKNKKDLENENRLENIKELLSAMKDFDNLENF-LEHVA 534 Query: 576 SLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVE 635 W +++ MT+H SKG + D V + G +EG + E Sbjct: 535 LATSVDQDWDGEKVNMMTMHGSKGLEFDVVFLPGWEEGLFPHQKSIEE----------KG 584 Query: 636 DFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNL 676 EERRL YV +TRA+ + F S F+E L Sbjct: 585 QNGLEEERRLAYVGITRAKKKALISFAMNRFYQGNWIDSMASRFIEELPEK 635 >UniRef50_C1ZAM6 DNA/RNA helicase, superfamily I n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZAM6_PLALI Length = 845 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 87/412 (21%), Positives = 147/412 (35%), Gaps = 47/412 (11%) Query: 191 QVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFG 250 L P+QA AV + E LLVLAG GSGKT V+ R L+ R P +IL + F Sbjct: 2 TQLLDDLTPSQAAAVEHFEGPLLVLAGPGSGKTRVVTRRIARLIERR-VHPAEILAITFT 60 Query: 251 RKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 KAA EM ER+ + + TFH I++Q V + + + E Sbjct: 61 NKAAREMAERVEHLIPGRRVAVSTFHKFCARILRQYGGVVGLKPNFSILDVKDQDAALKE 120 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 K+ R+ R+ + + G Sbjct: 121 AVKEEGFDPTHYS-------------------------PSRIGWRIGQLKNECISPGMFA 155 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR---- 426 + + ++A ++ L NAVDF L+ + IL++ Sbjct: 156 QQAGERVGTHLDS-------VVAKAYGRYQQILLDANAVDFDDLLLHVVTILKENPNLRQ 208 Query: 427 -FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 ++ ILVDE+QD + + +++AL + + L A GD Q+IY + GAQ+ Sbjct: 209 SLDERYRFILVDEYQDTNQAQYQIVSALSQN--EPNLCATGDPDQSIYGWRGAQIENILR 266 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL---- 541 F +F + L+ +R I A+ I+ N + K L + Sbjct: 267 FERDFPRVKMVRLEDNFRSTPEILAAADDLIRHNTQRKAKSLRTSNPSGLPVEIRQYADG 326 Query: 542 ---DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQID 590 +S + ++++ + I R + + + I Sbjct: 327 FQEADSLAAEIRERVASGERQYSDFAIFYRVNSLSRSIETALGRARVPFAIT 378 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 68/182 (37%), Gaps = 26/182 (14%) Query: 503 RFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEER 562 R + I E+ I + G L+ +G + ++ ++ L+ + + Sbjct: 472 RSHGPIAEL-LEVIVERTGYLQ-----NLSGLEPEEYANRKANVEELVASARQFDQDHVE 525 Query: 563 ILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAAR 622 L+ + + Q+ MT+H++KG + V +VG++ G + R Sbjct: 526 GGSLSEFLETCSLVQDADTIDESAGQVQLMTLHSAKGLEFPCVYLVGVEHGLLPHERSLR 585 Query: 623 ESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEI 672 E + EERRL++V +TRAR ++ + + S F+ Sbjct: 586 EG----------DPLQIEEERRLLFVGMTRAREELYLTWTRLRSTHGRLLSTIASQFLTE 635 Query: 673 LK 674 L Sbjct: 636 LN 637 >UniRef50_B2UPY5 UvrD/REP helicase n=2 Tax=Verrucomicrobia RepID=B2UPY5_AKKM8 Length = 669 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 94/408 (23%), Positives = 158/408 (38%), Gaps = 47/408 (11%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV + LV+AGAGSGKT L R WLL G P ILLL F KAA E Sbjct: 26 LNEEQYAAVSSEPGPALVIAGAGSGKTRTLTYRVAWLLDHGT-DPWNILLLTFTNKAARE 84 Query: 257 MDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M ER+R + + + + TFH++A I++Q ++ + + + I K Sbjct: 85 MTERVRSLIPLDLSRLWSGTFHSIANRILRQHAEYLGYTPAFTIMDSDDRKSMIKSVVKS 144 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 + + + +S + + I Sbjct: 145 LKLDEKSTRFPKP------------------------------EVLSSLFSLADNEGANI 174 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FIS 429 E S + + + + + N++DF L+ + + ++ + S Sbjct: 175 RETQENAYPYLSNHLDAILEVHDQYVARKQETNSMDFDDLLLNVVRLFQEQEHLRALYGS 234 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 ++HILVDE+QD + ++ L+ L +++ Q L VGDD Q+IY + GA M +F Sbjct: 235 RFQHILVDEYQDTNYLQSRLIDMLAREHGQ--LMVVGDDAQSIYSWRGADMENILSFTTR 292 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL-------LD 542 + + ++T YR I E++N I N Q++K L S+ + L + Sbjct: 293 YPAAKTFKIETNYRSVPEILELSNAAIAANEVQIEKQLRSVRPTGEMPPALVPLNDDRMQ 352 Query: 543 ESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQID 590 + + L I +L R H + +I Sbjct: 353 AKFVVQRIRDLIEEGTDPSEIAVLYRAHFHSMELQMELTRGEIPFRIT 400 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 55/152 (36%), Gaps = 21/152 (13%) Query: 539 TLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASK 598 + + LL + E L++ + E AA + + TIH +K Sbjct: 523 FENYDQRRQDLLHLAGFSERFESTEDFLSQLSLLGNTDDESAAADFSGGSVTLSTIHQAK 582 Query: 599 GQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVW 658 G + V ++GL +G + + EERRL YV +TRA+ +++ Sbjct: 583 GLEWSVVFLIGLCDGMFPHQRVIDDGDL----------AGLEEERRLFYVGITRAKDQLY 632 Query: 659 ALFNK-----------ENPSPFVEILKNLDVP 679 + + + PS F++ V Sbjct: 633 LTYPRWNCRAQGGTFMQMPSRFLDEFPAGLVE 664 >UniRef50_Q83GZ5 ATP-dependent DNA helicase n=2 Tax=Tropheryma whipplei RepID=Q83GZ5_TROWT Length = 743 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 98/417 (23%), Positives = 161/417 (38%), Gaps = 43/417 (10%) Query: 193 ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 LNP Q V +LL+ AGAGSGKT VL R LA GEAS +QIL + F K Sbjct: 7 LLKGLNPQQVEGVCYRGPTLLISAGAGSGKTKVLTHRIAGFLATGEASCDQILAITFTNK 66 Query: 253 AAEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 AA EM R + + D+ TFH++ + I+++ + AA I + Sbjct: 67 AASEMRHRTGDLVGLSVRDMQISTFHSVCVRILRECVGHLGKAKNFTIYDAADQRAIIKQ 126 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 + +AS++ + M Sbjct: 127 I---------------------------CQSTDTFGLTASMVASQIGLLKNQMHTPDTYS 159 Query: 371 AEMIAS--APEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-- 426 + ++ + + +R + + + + ++ LK NA DF LI + + +L+K Sbjct: 160 RCLASNSTNGNSVTSITLQREQFILHVFRRYQEILKEANAFDFDDLISETVFLLQKSPEI 219 Query: 427 ---FISPWKHILVDEFQDISPQRAALLAALRKQNS-QTTLFAVGDDWQAIYRFSGAQMSL 482 + + WK++LVDE+QD + + L+ L K + +L AVGD Q+IY F GA ++ Sbjct: 220 SAMYRNRWKYLLVDEYQDTNHAQYRLILELTKGDKSDMSLTAVGDSDQSIYAFRGADIAN 279 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD 542 F +F + L+ YR I AN I N + K L S +K + Sbjct: 280 IVNFENDFPDCHTILLEQNYRSCQNILLAANALISNNQNRKDKNLWSELGAGEKVIAYCA 339 Query: 543 ESQLDA------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 S + + L + I + R + E + ++ T Sbjct: 340 SSAEEEGRFVADRVRHLVDQGESLSDIAVFYRSNTQSRVIEESLIRQSIPYRVVGGT 396 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 47/124 (37%), Gaps = 21/124 (16%) Query: 566 LARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESI 625 L+ + + QI MT+H +KG + D+V + GL+EG + +E Sbjct: 541 LSDFMTNIALMTSYDQSDDAPGQITLMTLHMAKGLEFDFVFLTGLEEGILPHEMSLKEKN 600 Query: 626 MEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN---------PSPFVEILKNL 676 EERRL YV +TRA+ + F+ PS F + + Sbjct: 601 ------------GIEEERRLAYVGMTRAKKVLHLSFSSYRKRYTDGVRLPSRFWDEIPQH 648 Query: 677 DVPV 680 + Sbjct: 649 LLRW 652 >UniRef50_A1WZS5 ATP-dependent DNA helicase UvrD n=3 Tax=Gammaproteobacteria RepID=A1WZS5_HALHL Length = 725 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 97/412 (23%), Positives = 160/412 (38%), Gaps = 53/412 (12%) Query: 191 QVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFG 250 ++ LN AQ AV LVLAGAGSGKT VL RA +L+ ASP IL + F Sbjct: 4 DALTADLNDAQREAVCLPPGRALVLAGAGSGKTRVLTRRAAYLVQVEGASPFAILAVTFT 63 Query: 251 RKAAEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFI 308 KAA EM RI E L T + TFH +A +++Q +++ + + A + Sbjct: 64 NKAAGEMRGRIGELLGIATAGMWVGTFHGIAHRLLRQHAQRAGLPEGFQILDADDQLRVV 123 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 + +++ ++ ++S + G Sbjct: 124 KRVLRARGNDESRFP-----------------------------PRQVRGFISARKEEGE 154 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-- 426 +++ + + + + ++ A + VDFS L+ +A +L Sbjct: 155 RPSDV--------TEAGGDYQQELLAVYHDYEQACRRGGLVDFSELLLRAYELLRDDPEL 206 Query: 427 ---FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 + + HILVDEFQD + + L L Q+ LF VGDD Q+IY + GA++ Sbjct: 207 LGHYQRRFAHILVDEFQDTNALQYRWLKLL--GGEQSELFVVGDDDQSIYGWRGARVENI 264 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL--- 540 F G+ L+ YR I + ANR I+ N G+L K L + + Sbjct: 265 EHFRREMGDVRVVRLEQNYRSTGTILDAANRLIEHNSGRLGKQLWTDGWSGEPITLYAAF 324 Query: 541 LDESQLDALLDKLSGY----AKPEERILILARYHHMRPASLEKAATRWPKLQ 588 + + ++D++ IL R + A + + Sbjct: 325 NEVDEARWVVDRIRQLSEEGGYGHADFAILYRSNAQSRALEHELHAARLPFR 376 Score = 121 bits (304), Expect = 8e-26, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 65/180 (36%), Gaps = 30/180 (16%) Query: 514 RFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMR 573 + I + + + ++ L + +L + +PE+ + LA + Sbjct: 484 QVIARTDLR--------RHHERDEARLENLDELVTAARTFAQRDEPEDDLDPLAAFLTHA 535 Query: 574 PASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPP 633 + + + MT+H++KG + V +VG++EG + Sbjct: 536 ALEAGEGQADDWEHSVQLMTLHSAKGLEFPVVFLVGMEEGLFPHRMSVE----------- 584 Query: 634 VEDFPDAEERRLMYVALTRARHRVWALFNKE----------NPSPFVEILKNLDVPVARK 683 E EERRL YV +TRAR R+ ++ PS F+ + + R Sbjct: 585 -EPGRLEEERRLCYVGMTRARQRLILTHAEKRRLHGMDQLARPSRFLTEIPGEHLEEVRP 643 >UniRef50_Q31JE9 ATP-dependent DNA helicase UvrD n=3 Tax=Gammaproteobacteria RepID=Q31JE9_THICR Length = 741 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 94/408 (23%), Positives = 157/408 (38%), Gaps = 52/408 (12%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 + LN AQ AV + L+LAGAGSGKT VLV R WL S IL + F KA Sbjct: 7 LNDLNDAQRDAVTVEDQHALILAGAGSGKTRVLVHRIAWLTQVMGFSAYNILAVTFTNKA 66 Query: 254 AEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 A EM R+ + ++ +T TFH +A +++ K+V + + + + I Sbjct: 67 ASEMRARVEALIGNQSQGMTMGTFHGIAYRLLRTHYKEVGLPQSFQILDSDDQKRVIKRL 126 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 K AQ ++ +++ + G Sbjct: 127 LKALELDDAQWPH-----------------------------KQVQAFINGEKEEG---- 153 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR----- 426 P I + ++ M + +A++ K VDF+ L+ +A + K Sbjct: 154 ----RRPHHIDPGHNPYVRQMVQIYQAYEEQCKRAGLVDFAELLLRAHELWLKNPQVLAH 209 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + + ++HILVDEFQD + + A L L + + LF VGDD Q+IY + GA++ F Sbjct: 210 YQARFRHILVDEFQDTNSLQYAWLRVLAGASGR--LFIVGDDDQSIYGWRGAKIENIRRF 267 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL------ 540 E+F + + L+ YR I + AN I N ++ K L S Sbjct: 268 DEDFSDVKTVRLEQNYRSTGTILKAANGLIAFNQDRMGKNLWSAGEEGDPIRIYEAFNEL 327 Query: 541 LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 + + ++ + +L R + + + Sbjct: 328 DEARYVCNQVESWCEQGGSRSEVAVLYRSNAQSRVMEQALLQAQIPYR 375 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 22/105 (20%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 + MT+HA+KG + V ++GL+EG + + + EERRL Y Sbjct: 572 SVQLMTLHAAKGLEFPLVFMIGLEEGLFP------------SQQSQEDPYRLEEERRLAY 619 Query: 648 VALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVAR 682 V +TRA ++ F PS F++ + + V + R Sbjct: 620 VGITRAEKQLMISFANRRRMHGSEFYPLPSRFIKEIPDDCVQMVR 664 >UniRef50_Q0AHY9 ATP-dependent DNA helicase UvrD n=16 Tax=Betaproteobacteria RepID=Q0AHY9_NITEC Length = 748 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 92/411 (22%), Positives = 149/411 (36%), Gaps = 53/411 (12%) Query: 193 ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 + LNP Q AV S L+LAGAGSGKT VL R +LL G P+ +L + F K Sbjct: 4 LLTDLNPEQLEAVTWPHQSALILAGAGSGKTRVLTTRIAYLLQSGLTQPQNLLAVTFTNK 63 Query: 253 AAEEMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 AA EM RI L + TFH L +++ + + + A I Sbjct: 64 AAREMVARISTMLPINIRGMWIGTFHGLCHRMLRAHYEDAGLPQAFQILDMADQLAVIKR 123 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 K+ S + +L +++ + G Sbjct: 124 ILKERSLDEKVL-----------------------------APRQLQWFINNAKEEGLRA 154 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR---- 426 +++ D + +A + ++ VDF+ L+ + +L + Sbjct: 155 SQV---------DTRGSFNRTLAECYQVYEAVSMRGGTVDFAELLLRCYELLSRNEILRD 205 Query: 427 -FISPWKHILVDEFQDISPQRAALLAALRKQNS--QTTLFAVGDDWQAIYRFSGAQMSLT 483 + ++HILVDEFQD + + + L S +FAVGDD Q+IY F GA + Sbjct: 206 HYRGRFEHILVDEFQDTNRLQYQWIKLLAGSGSQQHAAIFAVGDDDQSIYAFRGAHVGNM 265 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDE 543 ++F + L+ YR I + AN I+ N G+L K L + + Sbjct: 266 RDLEKDFSVPKIIRLEQNYRSQGNILDAANALIENNKGRLGKNLWTAAGKGESVRIYYAA 325 Query: 544 SQLDA------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 + +D + L I +L R + + Sbjct: 326 TDVDETSFIVDEIKALHAEGLSLSEIALLYRSNAQSRVLEHGLFNASISYR 376 Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats. Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 22/108 (20%) Query: 586 KLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRL 645 + + MT+HA+KG + V I GL+EG + E EERRL Sbjct: 552 QDAVQLMTVHAAKGLEFHSVFISGLEEGLFPHENSRNEPN------------GLEEERRL 599 Query: 646 MYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVARK 683 MYVA+TRAR R++ + + PS FV+ + + R Sbjct: 600 MYVAMTRARQRLYLSYAESRMLHGQVRVNVPSRFVDEIPEELLKRLRS 647 >UniRef50_A5TXQ2 Superfamily I ATP-dependent helicase n=15 Tax=Fusobacterium RepID=A5TXQ2_FUSNP Length = 737 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 83/408 (20%), Positives = 155/408 (37%), Gaps = 53/408 (12%) Query: 193 ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 LN Q A + S+L+LAGAGSGKT + R ++ SP IL + F K Sbjct: 5 LLEKLNDKQREAASQIDGSILILAGAGSGKTRTITYRIAHMIENVGISPYSILAVTFTNK 64 Query: 253 AAEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 AA+EM ER+ + + T TFH+ + +++ + +V + + Sbjct: 65 AAKEMRERVEGLVGDIAKACTISTFHSFGMRLLRMYASEVGYNPNFTIYDTDDQKRIVKA 124 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 K + +F + +R + S + + ++ Sbjct: 125 ILKGQNI-----------------------SFNGVKLTERDIVSIISKIKEEIKTP---- 157 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK----GR 426 D +S K + + + AL NA+DFS ++ +L+K + Sbjct: 158 ------------DEYSVINKQIIEVYDKYNKALLESNAMDFSDILLNTYKLLQKPEILEK 205 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + +K+I++DE+QD + + ++ + ++ + L VGD+ Q+IY F GA + F Sbjct: 206 VQNKYKYIMIDEYQDTNNLQYKIIDLIARK--SSNLCVVGDENQSIYGFRGANILNILNF 263 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDES-- 544 N+ + L+ YR + I + AN I+ N K L + L ++ Sbjct: 264 ENNYNNAKIVKLEENYRSTTTILDAANELIKNNKSSKDKKLWTQNGKGDLIKVLACDNGR 323 Query: 545 ----QLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 ++ + + P + IL R + E + Sbjct: 324 DEVSRIIEFIRENHQNGVPYRDMTILYRTNAQSRIFEEGLLRYNIPHK 371 Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 50/155 (32%), Gaps = 25/155 (16%) Query: 540 LLDESQLDALLDKLSGYAKPEERI---LILARYHHMRPASLEKAATRWPKLQIDFMTIHA 596 D +D+ E + L L Y + MTIH Sbjct: 494 YDDAEARIENIDEFKNSILELENVVGELRLNEYLENVSLISATDDLEEKSDYVKLMTIHN 553 Query: 597 SKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHR 656 SKG + V +VG + A +++ EERRL YVALTRA + Sbjct: 554 SKGLEFPIVFLVGFENEIFPGTRAM------------LDEKEMEEERRLCYVALTRAEKK 601 Query: 657 VWALFNKEN----------PSPFVEILKNLDVPVA 681 ++ PS F++ + + + Sbjct: 602 LYLSHATIRFVYGQDRLSTPSVFLKEIPEKLLDIE 636 >UniRef50_B2V7G3 UvrD/REP helicase n=5 Tax=Aquificales RepID=B2V7G3_SULSY Length = 706 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 89/408 (21%), Positives = 157/408 (38%), Gaps = 53/408 (12%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 S LN Q AV++ + LLVLAGAGSGKT V+ + +L+ +IL + F KA Sbjct: 7 LSGLNERQKEAVLHFDSPLLVLAGAGSGKTKVITHKIMYLVKHYGIPLNRILAITFTNKA 66 Query: 254 AEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 AEEM ERI + + + TFH+ A ++ ++ + + I + K Sbjct: 67 AEEMKERIEKAIGEKPQWVMTFHSFAAKFLRMEAENIGYDRNFVIYDEEDSKKLIKKVLK 126 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 + + + K ++ Sbjct: 127 DLNLNEEKFK--------------------------------------PDKIKDIISKIK 148 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FI 428 PE+ +++S + + + ++ LK NA DF L+ + + IL + Sbjct: 149 QDDNPEDQLEIYSISNSYIKTVFEKYEEELKNSNAFDFDDLLIKTVKILSNHPEVLERWR 208 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 + + +ILVDE+QD + + LL L T+ VGD Q IY + GA F + Sbjct: 209 NKFDYILVDEYQDTNRIQHKLLKLLVGDKH--TITVVGDPAQCIYTWRGAHPENILDFEK 266 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKK---PLNSLTNGDKKAVTLLDESQ 545 +F + L+ YR +I + AN I ++ G+ K L + + + E++ Sbjct: 267 DFPGTKIVKLERNYRSTKKILDCANAVISKSKGKWKGKVLTLWTDKEEGEDIFLVPLENE 326 Query: 546 LDA---LLDKLSGYAKP--EERILILARYHHMRPASLEKAATRWPKLQ 588 + + +K+ A+ +L R + E + Q Sbjct: 327 KEEARFIANKIKQLAQDGSYGDFAVLVRMTFLTRNIEEAFISNGIPYQ 374 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 78/213 (36%), Gaps = 36/213 (16%) Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLN--SLTNGDKKAVTLLDESQ 545 E F + + L Y E+ ++ K G ++ + E Sbjct: 442 ERFNKSVKIKLQE-Y------LELMEYVLENAKFSPSKTAKEIVERIGYQEYLQKEYEKD 494 Query: 546 LDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRW---PKLQIDFMTIHASKGQQA 602 + ++ ++ E + + + + MT+H +KG + Sbjct: 495 WEDRVENINELIIALEEAEKEGKTLDQFFEESALMQAQDTIDNQNKAKIMTVHGAKGLEF 554 Query: 603 DYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFN 662 D V + GL+EG FP+ + EERRL YVA+TRA+++++ + Sbjct: 555 DTVFVAGLEEGI--FPSGRAFD----------DPTQLEEERRLFYVAITRAKNKLYLTYA 602 Query: 663 KENP-----------SPFVEILKN-LDVPVARK 683 KE S F++ +K + +PV +K Sbjct: 603 KERKSYGNKSVPTKRSQFIDDIKEHIKLPVKQK 635 >UniRef50_P03018 DNA helicase II n=409 Tax=cellular organisms RepID=UVRD_ECOLI Length = 720 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 95/410 (23%), Positives = 150/410 (36%), Gaps = 52/410 (12%) Query: 193 ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 LN Q AV +LLVLAGAGSGKT VLV R WL++ SP I+ + F K Sbjct: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 Query: 253 AAEEMDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 AA EM RI + + T + TFH LA +++ + + + + Sbjct: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 K + + Q + +++ + G Sbjct: 126 LIKAMNLDEKQWP-----------------------------PRQAMWYINSQKDEGLR- 155 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR---- 426 P I+ + + + +A++ A VDF+ L+ +A + Sbjct: 156 -------PHHIQSYGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQ 208 Query: 427 -FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 + + +ILVDEFQD + + A + L + + VGDD Q+IY + GAQ+ Sbjct: 209 HYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK--VMIVGDDDQSIYGWRGAQVENIQR 266 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQ 545 F +F E L+ YR S I AN I+ N G+L K L + + ++ Sbjct: 267 FLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNE 326 Query: 546 LDA------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 LD + IL R + E +I Sbjct: 327 LDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRI 376 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 31/143 (21%), Positives = 53/143 (37%), Gaps = 22/143 (15%) Query: 550 LDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVG 609 + Y + +E ++ L + + + + MT+H++KG + V IVG Sbjct: 515 ATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVG 574 Query: 610 LQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKE----- 664 ++EG + E EERRL YV +TRA ++ + + Sbjct: 575 MEEGMFPSQMSLDEG------------GRLEEERRLAYVGVTRAMQKLTLTYAETRRLYG 622 Query: 665 -----NPSPFVEILKNLDVPVAR 682 PS F+ L V R Sbjct: 623 KEVYHRPSRFIGELPEECVEEVR 645 >UniRef50_A6CC22 ATP-dependent DNA helicase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CC22_9PLAN Length = 755 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 84/404 (20%), Positives = 144/404 (35%), Gaps = 47/404 (11%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 L P Q AV + + LLVLAG GSGKT V+ R L+ QIL + F KAA+E Sbjct: 7 LTPPQFAAVSHHQGPLLVLAGPGSGKTRVITHRIASLI-HAHVPAHQILGITFTNKAADE 65 Query: 257 MDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCS 316 M ER+R+ + + TFH + I+++ + V + S + I + Sbjct: 66 MGERVRQLIPDSRVEISTFHKFCVKILRRYGRGVGLDSNFSIFDTTDQQQLIRFVLNELD 125 Query: 317 EKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIAS 376 +AS + R + + S Sbjct: 126 IDTV-------------------------AYNPSTIASMISRAKNDLITVDRFVEIYQES 160 Query: 377 APEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFIS-----PW 431 + + + A + ++ L NAVDF L+ +L+ + + Sbjct: 161 VGDHL-------QAVAARVYPMYQKLLLESNAVDFDDLLLHVASLLKGSPELRATLDERY 213 Query: 432 KHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFG 491 ++ILVDE+QD + + ++ L L GD Q+IY + GA++ F +F Sbjct: 214 QYILVDEYQDTNLAQYQIIMGLSLNTR--NLCVTGDPDQSIYGWRGAKIENILQFERDFP 271 Query: 492 EGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL---DESQLDA 548 + + L+ +R I VA+ I N + K L + L + + D Sbjct: 272 DCKTIRLEQNFRSTKEILRVADDLISHNQRRKVKSLFTENEEGSPVELLCFQDERHEADD 331 Query: 549 LLDKLS----GYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 + ++ + I R + + A Q Sbjct: 332 IARRIRNAVDQGKQEYTDYAIFYRVNSLSRELELALARHKIPYQ 375 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 56/147 (38%), Gaps = 24/147 (16%) Query: 542 DESQLDALLDKLSGYAKPEERIL----ILARYHHMRPASLEKAATRWPKLQIDFMTIHAS 597 + Q A +++L AK + I L + + + ++ MT+HA+ Sbjct: 500 ADQQRIANVNELLSTAKKYDDIYGEETTLEGFLEVSTLASATDQLDTDAGRVTLMTLHAA 559 Query: 598 KGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRV 657 KG + V IVG+++ RE + EERRL +V +TRA + Sbjct: 560 KGLEYPVVFIVGVEQNLIPHERVLREEFRDG----------LEEERRLFFVGITRAEQNL 609 Query: 658 WALFNKEN----------PSPFVEILK 674 + +E S F++ + Sbjct: 610 YLTQTRERSMRGRPWRTITSDFLKEID 636 >UniRef50_B2UQR8 UvrD/REP helicase n=2 Tax=Verrucomicrobiaceae RepID=B2UQR8_AKKM8 Length = 668 Score = 377 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 90/415 (21%), Positives = 160/415 (38%), Gaps = 61/415 (14%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 + LN AQ +AV + +L+LAGAG+GKT + R ++ RG SP+ IL + F Sbjct: 3 KSFSMESLNAAQRKAVQTLQGPVLILAGAGTGKTRTVTCRIAHMVDRG-ISPKSILAVTF 61 Query: 250 GRKAAEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHEL 306 KAA EM ER+ + + I TFH+L + I+++ ++ + + + Sbjct: 62 TNKAALEMRERVGQMVERKAARQIMVSTFHSLCVRILREDIGRLGYKTNFTIYSGSEQSG 121 Query: 307 FIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMH 366 I ++ + + S + R + Sbjct: 122 LIRRLI-------------------------VRHGGITEKITPKDVLSSMSRMKNSGLGL 156 Query: 367 GGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR 426 + + A + +++ L+A+N+VDF L+ A +L++ R Sbjct: 157 DSIEDNLT------------------ANIAASYQRELQAQNSVDFDDLLILADKLLKEHR 198 Query: 427 -----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMS 481 + +++I VDEFQD + + +LL L + + VGDD Q+IY + GAQ+S Sbjct: 199 DVREAWQQRFRYITVDEFQDTNSLQMSLLGHLV--GPEHNVCVVGDDDQSIYGWRGAQIS 256 Query: 482 LTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL 541 F F L+ YR + I + AN I+ N G+ K L + G + + Sbjct: 257 NILEFERFFPNPSVIKLEENYRCTAPILDTANALIRHNLGRRDKTLRAHKGGGEAVRLIS 316 Query: 542 DESQLDALLDKL-------SGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + + +P E IL R + + ++ Sbjct: 317 MPGDAEEAEFIITDIENVRRQEGRPWEDFAILFRANTQSRIIEQTLREHKIPYRM 371 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 44/120 (36%), Gaps = 23/120 (19%) Query: 565 ILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARES 624 + + + K + +T+HA+KG + V +VGL+EG + + Sbjct: 525 LRDYLAQVTLDKEDNDDDVENKPGVCLITMHAAKGLEFPVVYLVGLEEGILPHKRSLEDG 584 Query: 625 IMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILK 674 EERRL+YV +TRA+ ++ + S F+ + Sbjct: 585 NC-------------DEERRLLYVGITRAQEKLMLTYCATRLRYGDRMPCQRSSFLSEIP 631 >UniRef50_A1TNG2 ATP-dependent DNA helicase UvrD n=11 Tax=cellular organisms RepID=A1TNG2_ACIAC Length = 818 Score = 377 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 93/416 (22%), Positives = 152/416 (36%), Gaps = 58/416 (13%) Query: 193 ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 LN Q AV L+LAGAGSGKT VL R WLL G ASP IL + F K Sbjct: 31 LLQNLNDEQLAAVTLPAGHALILAGAGSGKTRVLTTRIAWLLQNGYASPGSILAVTFTNK 90 Query: 253 AAEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 AA+EM R+ L + TFH L +++ K + + + + Sbjct: 91 AAKEMTARLSAMLPVNVRGMWIGTFHGLCNRLLRAHHKSAGLPATFQILDTQDQLSAVKR 150 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 KQ + + + ++ ++S + G Sbjct: 151 LCKQFNIDEERFP-----------------------------PKQMAYFISGCKEEGLRP 181 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG----- 425 ++ A + + L + ++ + E VDF L+ ++ +L Sbjct: 182 GDVDARDADGRKK---------VELYQLYEEQCQREGVVDFGELMLRSYELLRDNDPIRA 232 Query: 426 RFISPWKHILVDEFQDISPQRAALLAALRKQ------NSQTTLFAVGDDWQAIYRFSGAQ 479 + ++HILVDEFQD + + A L + + ++ AVGDD Q+IY F GA+ Sbjct: 233 HYQRRFQHILVDEFQDTNKLQYAWLKQIAGDVVDGRLVTHGSVLAVGDDDQSIYAFRGAR 292 Query: 480 MSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVT 539 + F F + L+ YR S I + AN I N +L K L + + Sbjct: 293 VGNMQDFVREFDVRHQIKLEQNYRSYSNILDSANALISHNSRRLGKNLRTTQGPGEPVRV 352 Query: 540 L---LDESQLDALLDKLSGY----AKPEERILILARYHHMRPASLEKAATRWPKLQ 588 D ++ ++D++ I +L R + + Sbjct: 353 YEAPTDLAEAQWMVDEIRQLARNDGFERREIAVLYRSNAQSRVIESALFNAAVPYR 408 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 49/128 (38%), Gaps = 22/128 (17%) Query: 566 LARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESI 625 LA + + + + MT+HASKG + D V I G++EG + + Sbjct: 601 LAAFLTHAALEAGDNQAQAGQDAVQLMTVHASKGLEFDAVFIGGMEEGLFPHENSMSDRD 660 Query: 626 MEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKN 675 EERRLMYVA+TRAR R++ ++ S F + L Sbjct: 661 ------------GLEEERRLMYVAITRARKRLYLSHSQTRLLHGQTRYNIKSRFFDELPE 708 Query: 676 LDVPVARK 683 + Sbjct: 709 AALKWITP 716 >UniRef50_B5YF03 ATP-dependent DNA helicase PcrA n=2 Tax=Dictyoglomus RepID=B5YF03_DICT6 Length = 625 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 91/409 (22%), Positives = 154/409 (37%), Gaps = 53/409 (12%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 LN Q AV+ E +L+LAGAGSGKT V+ + +L+ A PE I+ L F KA Sbjct: 4 LKELNKEQLEAVLEIERPVLILAGAGSGKTRVITYKIAYLIKNNIAKPENIVALTFTNKA 63 Query: 254 AEEMDERIRERLHTED---ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 AEEM +RI L +D + A TFH L++++ K + E I + Sbjct: 64 AEEMKKRINNMLGAKDADKVWAGTFHGFGLYLLKNFGKYWSLSPYFVIYDENDQEDLIKD 123 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 K + K + R + ++ R + Sbjct: 124 ILKDLNRAK--------------------------DYNARDIKEKISRLKDQLITP---- 153 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR---- 426 E + + +++ + K ++ L+ NA+DF+ L+ +I +L++ Sbjct: 154 -------QEFSSLISNSFDEIVLEVYKRYEKELRRNNALDFADLLLYSIRLLQEKPAICG 206 Query: 427 -FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 +++LVDE+QD + + L + + + VGDD Q+IY F GA Sbjct: 207 FLQDKIEYVLVDEYQDTNKAQYELFKIIVLDKQKFS--VVGDDDQSIYSFRGADYQNIFR 264 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL---- 541 ++F L YR +I E+AN I N + K L S V Sbjct: 265 LEKDFKNLRVIFLTKNYRSTQQILEIANVLIANNDKRYPKELWSDKKDGTYPVLFRALNE 324 Query: 542 --DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 + + + + + I +L R + + E + Sbjct: 325 EDEANFVARQIKLEVAKGRRWSEIAVLYRTNRQSRSFEEALIRNNIPYK 373 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 19/92 (20%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 ++ +T+H+ KG + + V +VG++EG A + EERRL Y Sbjct: 539 KVSLITLHSVKGLEFEVVFLVGMEEGILPHYNATTKE-------------EIQEERRLCY 585 Query: 648 VALTRARHRVWALFNKEN------PSPFVEIL 673 V +TRA+ +++ + + PS F+E + Sbjct: 586 VGITRAKEKLYLSYAAKRYSRYQEPSRFLEEI 617 >UniRef50_B1AJE0 ATP-dependent DNA helicase PcrA n=15 Tax=Ureaplasma RepID=B1AJE0_UREP2 Length = 743 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 101/419 (24%), Positives = 161/419 (38%), Gaps = 47/419 (11%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 ++ S LN Q AV LV+AGAG+GKTSVL R +L+ P +IL F Sbjct: 5 IDYSRLNQEQKEAVTADLGPQLVIAGAGTGKTSVLTLRIAYLITEKNIHPSRILGFTFTN 64 Query: 252 KAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 KAA+EM ER+ + + TFH++ + I+QQ + + ++ E+ + E Sbjct: 65 KAADEMKERVGKTIGVSIPYLSTFHSMCVKILQQDIHYLNYHNNIKIIDTDDQEVLLKEI 124 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 Q + +K + S + F+D + + V L Sbjct: 125 FDQLNIEKKS----QVIKKIIKTISKVKNKFFDQNDMLNEKNHKYLELVDL--------- 171 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GR 426 + + + K + N VDF LI+ + + + Sbjct: 172 ---------------NDAQRLVDIYKIYCDRCFKLNYVDFDDLINLTHKLFIEFPEVLEK 216 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + + + +ILVDEFQD + + L++ L ++ LF VGD Q IY F GA+ + F Sbjct: 217 WQNKFDYILVDEFQDTNKIQYDLISLLATKH--QNLFVVGDPDQMIYSFRGAEQWIINNF 274 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL------ 540 +NF + L T YR I ANR I N KK L + D Sbjct: 275 SQNFKNTKVTILKTNYRSTQPILNTANRLIDANNNNYKKNLTAFNTNDNNLPIYLRGQNP 334 Query: 541 -LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASK 598 + + + + +L P +I +L R +H + TI SK Sbjct: 335 IDEANWIARKIRELLEEGTPANQIAVLFRSNHYSRTIEQSMMRESIPY-----TILGSK 388 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 68/197 (34%), Gaps = 30/197 (15%) Query: 506 SRIGEVANRFIQQNPGQLK--KPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERI 563 I N I++ +++ K L KK + + DK+ + + + Sbjct: 463 KNILNFVN-LIKEIRDEMEDLKIHEILELIYKKVNYEAYLLENEKAEDKIDNVYELKRAM 521 Query: 564 LILARYHHMRPASLE--------KAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSD 615 + H + + K + MT+H SKG + + V + G+ EG Sbjct: 522 KMYVDRHPDDTINDYLNSIALYLNKDGKDSKENVLLMTVHNSKGLEYENVFVAGMNEGLL 581 Query: 616 GFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFN---------KENP 666 A + ++ EERR+ YVALTRA+ ++ + Sbjct: 582 PSDRAINDDPIKG----------VEEERRIAYVALTRAKKNLYISSACCYDPLARRQVFE 631 Query: 667 SPFVEILKNLDVPVARK 683 S F+ + ++ + Sbjct: 632 SRFINEIGFNNLKIINS 648 >UniRef50_D2RA55 UvrD/REP helicase n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2RA55_GARVA Length = 515 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 111/538 (20%), Positives = 180/538 (33%), Gaps = 102/538 (18%) Query: 191 QVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFG 250 + L+ +Q A E + ++A AG+GKT + R + A G+ PE++L + F Sbjct: 21 EALLDGLDNSQREAATALEGPVRIIACAGAGKTRTITRRIAYACATGKWDPERVLAVTFS 80 Query: 251 RKAAEEMDERIRERLHTEDI-TARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIA 309 KAA EM RI L ++ TFH+ AL I+ V + IA Sbjct: 81 VKAAAEMRSRIEA-LGVSNVGCVSTFHSAALQQIRSVWNDVCSAQFPSIM--NDSQQIIA 137 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 K+ + R + + ++ + Sbjct: 138 SALKRYPDFADMTLL-----------------------QTRDILAEINWAKVSLIAPD-- 172 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRF-I 428 + A + + +A++ A N +DF+ ++ IL Sbjct: 173 -DYLRVCASTHRLPPAGLEPQQFVDIYEAYETEKNAHNCIDFNDILLLCCHILRNFPEAA 231 Query: 429 SPWK----HILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 + K I VDE+QD+SP + LL QN + VGD Q IY F+GA Sbjct: 232 NRIKQSIGWITVDEYQDVSPLQHELLRLWMGQNRD--ICVVGDPAQTIYSFAGANSYYLL 289 Query: 485 AFHENF-GEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLK----KPLNSLTNGDKKAVT 539 +F + F G L+T YR RI +ANR + + + K + V Sbjct: 290 SFPQEFAPLGADISLNTDYRSTERIVGLANRVLAASAHKKDYVKVKAATKGGVRVSQQVF 349 Query: 540 LLDESQLDALLDKLSGYAKPEERIL----------------------------------- 564 D + ++++++ K L Sbjct: 350 ATDVEEALGVVEQIAKLVKSGVAHLGECAILTRTNAQQQVVCKALKAAKLPYRVRKDVGW 409 Query: 565 ---ILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAA 621 +L + + TIHA KG + +V ++G EG F + Sbjct: 410 QRNVLEDAQSYGSQGISDIFASSNISTVTVSTIHAVKGLEFAHVYVIGCSEGLIPFGS-- 467 Query: 622 RESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN---------PSPFV 670 +D EERRLMYVA+TRA + + PS F+ Sbjct: 468 -----------TTDDSALEEERRLMYVAITRAEKTLHLSYASRKDSGTGMNRVPSRFL 514 >UniRef50_Q68WT1 DNA helicase II n=17 Tax=Rickettsieae RepID=UVRD_RICTY Length = 658 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 81/409 (19%), Positives = 149/409 (36%), Gaps = 50/409 (12%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 LN Q +A ++ E LL+LAGAG+GKT VL +R ++ + A P IL + F KAA Sbjct: 12 HTLNSEQKKAALHTEGPLLLLAGAGTGKTKVLTSRIANIIQQNLALPHNILAVTFTNKAA 71 Query: 255 EEMDERIRERLHTEDITARTFHALALHIIQQGSK--KVPIVSKLENDTAARHELFIAEWR 312 +EM ER+ ++ + TFH++A I++ + + + +K + + + Sbjct: 72 KEMSERVHNLINCYGVNIGTFHSMAAKILRDQIENLNLGLNNKFTIISHDDQLTLVKDIV 131 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 K + + + + + + RW + A Sbjct: 132 K------------------------LKKDIDTKKYTPKLIHIIISRWKDQGLLPSKLSA- 166 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----F 427 D ++ + + ++ L N +DF L+ + K + Sbjct: 167 ---------SDTNLPLQRVAKLIYEEYQKNLLISNVLDFGDLLLYNNELFIKNPEILKYY 217 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 +++IL+DE+QD + + L + VGDD Q+IY + GA++ F Sbjct: 218 QEKYRYILIDEYQDTNIAQYLWARMLASLYR--NICCVGDDDQSIYGWRGAEVGNILRFE 275 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL------- 540 ++F L+ YR I A+ I N + K L + + +K + Sbjct: 276 KDFAGATIIKLEQNYRSTLPILAAASNVINNNKNRHSKTLWTDSASGEKIKIISCLSDKE 335 Query: 541 LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + + I IL R + E +I Sbjct: 336 EARYIACEIDKLVREERYHAGNIAILVRAGFQTRSFEEAFINSAMPYKI 384 Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 68/213 (31%), Gaps = 27/213 (12%) Query: 481 SLTTAF--HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAV 538 + F + E +Y + + + ++ + D + Sbjct: 441 RNISNFVAIKEILETGIFK-AKSYESLKDLLTKIDNWYEKFITDTPINVVKTILDDSGYL 499 Query: 539 TLLDESQLDALLDKLSGYAKPEERILILARYH----HMRPASLEKAATRWPKLQIDFMTI 594 ++L E + + ++ + I H H + + MT+ Sbjct: 500 SMLQEEKTEEAFGRIENINEMLRAIAEFNDIHDFIEHSSLVMENEVLETNYGGSVTIMTL 559 Query: 595 HASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRAR 654 HA+KG + D V + G +EG + E + EERR+ YV +TRA+ Sbjct: 560 HAAKGLEFDVVFLPGWEEGVFPSQRSLDED----------GEKGLEEERRIAYVGITRAK 609 Query: 655 HRVWALFNKEN----------PSPFVEILKNLD 677 ++ + PS F+ + + Sbjct: 610 KDLYITHAESRKIFYEIVHSCPSRFINEIPDEI 642 >UniRef50_Q6XYV7 ATP-dependent DNA helicase n=2 Tax=Spiroplasma RepID=Q6XYV7_SPIKU Length = 729 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 83/408 (20%), Positives = 153/408 (37%), Gaps = 53/408 (12%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNP Q AV+ + ++AGAGSGKT V+ + +L+ P +I + F KA Sbjct: 8 SLNPNQREAVLRITGPVRIIAGAGSGKTRVITNKIAYLIKYANLQPWRICAVTFTNKATN 67 Query: 256 EMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM RI E + + T+HAL + I+++ + A + I K Sbjct: 68 EMRTRIVEMIGNSGQRCMIATYHALCVRILREDIIHLNYDRYFNIIDMADQDSIIRNIYK 127 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 + K D + + + + + + + A+ + Sbjct: 128 RLPMKY-------------------------DAQEAKMVKNFISKLKNDFISPNSAKTSV 162 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RFI 428 A + ++ L+ N+VDF+ LI + + ++ Sbjct: 163 NGDEMR------------WAEVYDTYEKRLREINSVDFNDLILLTYKLFKNNGEVLKKWQ 210 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 + + + LVDEFQD + + ++ L N + + VGD Q IY + GA+++L F + Sbjct: 211 NRFDYFLVDEFQDTNELQFDIIKWLVGDN--SNITIVGDPDQTIYSWRGAKINLILNFDK 268 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDA 548 F + L+ YR I +AN I N +++K L ++ + + + D Sbjct: 269 YFPHTQTIVLNENYRSTQSILSLANNLIIHNKNRIEKNLFTIKASGQLPILYHGANSSDE 328 Query: 549 -------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + + ILIL R +++ A +I Sbjct: 329 SDFVARKIKTLIKEENYDYNDILILYRANYLSRDLETALADYGISYRI 376 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 20/122 (16%) Query: 571 HMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEAL 630 +++ SL+ + I MTIH +KG + V IVGL EG Sbjct: 529 YLQLISLQTDSDNLTDNTISLMTIHNAKGLEKKVVFIVGLNEGIFP-----------TTQ 577 Query: 631 LPPVEDFPDAEERRLMYVALTRARHRVWALFN---------KENPSPFVEILKNLDVPVA 681 + EERR +YVA+TR+ ++ + + S F++ L N Sbjct: 578 AIKMGTEQLEEERRALYVAITRSEELLFISYADGYSYITGNERFESRFIKELDNDFYEKV 637 Query: 682 RK 683 Sbjct: 638 NS 639 >UniRef50_D1J8P0 ATP-dependent helicase n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J8P0_MYCHP Length = 745 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 81/418 (19%), Positives = 153/418 (36%), Gaps = 50/418 (11%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 ++ LN Q AV+ E L ++AGAGSGKT VL + +L+ + P +IL L F Sbjct: 2 IDLKDLNEQQKSAVIYNEGPLRIIAGAGSGKTRVLTYKIAYLIQKLGVLPNRILALTFSN 61 Query: 252 KAAEEMDERIRERLHTED-----ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHEL 306 KAA EM +R+ L ++ TFHA+ I+++ + + + Sbjct: 62 KAANEMKQRVFNLLAEDNPSNLSPYISTFHAMCAKILRKEIYNFGYENDFQILDELDQKE 121 Query: 307 FIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMH 366 + + E + S + + + Sbjct: 122 ILKIVYSELDISPT-------------------------EFTFSSIISFIQNKKNSIEYL 156 Query: 367 GGAQAEMIASAPEEIRDLFSKRIKLMA---PLLKAWKGALKAENAVDFSGLIHQAIVILE 423 + + E+ ++ K+ A + + ++ L+ +++DF L+ + Sbjct: 157 NNSINDNNEHFNEDSDSQETQDEKIKAIKEKIYERYQLHLERSHSLDFDDLLVFVYKLFY 216 Query: 424 K-------GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFS 476 + R+ + +IL+DEFQD S + ++ L ++ L VGD Q IY + Sbjct: 217 EPKFSFVAERWKKRFDYILIDEFQDTSILQYRIMQKLANEH----LTIVGDPDQTIYSWR 272 Query: 477 GAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKK 536 A +++ F +++ L+ YR I AN I N +L+K L + + Sbjct: 273 NADINIIMNFDKDYPNSVTVKLEENYRSTKTILRAANNLISHNKLRLEKKLFTENEEGEN 332 Query: 537 AVTLL------DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 + + + +L + I IL R + A E + Sbjct: 333 IEFYCGFNDEAEARWIATKISELKRNRVQLKNIAILYRTNSCSRAIEEALIKENTIYK 390 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 60/178 (33%), Gaps = 17/178 (9%) Query: 505 NSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERIL 564 + I I + NS + K + A +K + +E + Sbjct: 492 TNAIHLTIKELIVNKIKYFDEIKNSEEEYENKIDNFNSLIEAIAEWEKKNPQGSIDEYL- 550 Query: 565 ILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARES 624 ++ + MT+H SKG + DYV + L E A S Sbjct: 551 ------QEITLITDRDVEDDAASFVSLMTVHNSKGLEFDYVFVACLAENIFPLKRAISIS 604 Query: 625 IMEEALLPPVEDFP-----DAEERRLMYVALTRARHRVWALFNK-----ENPSPFVEI 672 ++ ++F EERRL YVA+TRA+ R+ F+ S F+ Sbjct: 605 PQDDFTFLNSKNFKENIEGLEEERRLAYVAMTRAKKRLMLSFSVGRNGINRKSRFLSE 662 >UniRef50_C1TPS7 DNA/RNA helicase, superfamily I n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TPS7_9BACT Length = 656 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 91/417 (21%), Positives = 153/417 (36%), Gaps = 58/417 (13%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 LNP Q AV LLVLAGAGSGKT VL ++ WL+A P +IL + F KA Sbjct: 8 LESLNPRQREAVSYEGTPLLVLAGAGSGKTRVLTSKLAWLVAERSVPPWRILAVTFTNKA 67 Query: 254 AEEMDERIRERLHTEDIT--ARTFHALALHII---QQGSKKVPIVSKLENDTAARHELFI 308 A EM +R+ L TFH+ L ++ + + + Sbjct: 68 AREMKDRVDAMLDGGYPYGQISTFHSFGLQMLFRNRDALEARGYRRNFVVFDRGDSLSLV 127 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 + K +Q + + + + Sbjct: 128 KKSMKAMKLDTSQME-------------------------PSWVLECISKAK-------- 154 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-- 426 + + + + MA L + +LK + A DF LI + ++ R Sbjct: 155 -------TGSDPVSMDGAILEGDMAELYSLYTKSLKEQGAFDFDDLIVMPLHLMSTDRDI 207 Query: 427 ---FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 ILVDE+QD++ + ALL L + + AVGD Q+IY + GA MS+ Sbjct: 208 LKKERDRLDWILVDEYQDVNRPQFALLRLLAGDSP--NVMAVGDPDQSIYGWRGADMSVI 265 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL-- 541 F +F + L+ YR I + AN I N + +K L + +G + + Sbjct: 266 LGFERHFPGSKVILLEQNYRSTETILDAANSVIGNNVNRPEKRLWTARSGGEPINVVTLG 325 Query: 542 ----DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTI 594 + + ++++L + +L R + + ++ R ++ T Sbjct: 326 DERAEARYVSDVVEELLSLGYRYTDMAVLYRMNALSRNFEQEFVKRGLPYRVVKGTA 382 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 38/109 (34%), Gaps = 21/109 (19%) Query: 577 LEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVED 636 I ++HA+KG + V IVG+++G + Sbjct: 532 YTDQEVDDIPDGISLSSLHAAKGLEFPVVFIVGMEDGIFPHGRSLD-----------GGR 580 Query: 637 FPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKN 675 EERRL YV +TRA R++ ++ S F+ + Sbjct: 581 DELEEERRLCYVGMTRAEERLYLTSSRFRRLFGSVMNNDVSRFIWEIPE 629 >UniRef50_Q7UIR9 ATP-dependent DNA helicase n=2 Tax=Planctomycetaceae RepID=Q7UIR9_RHOBA Length = 787 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 81/421 (19%), Positives = 153/421 (36%), Gaps = 58/421 (13%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 + L AQA AV + + LL++AG GSGKT V+ R ++L G P QI L F KA Sbjct: 5 TKDLTAAQAEAVQHIDGPLLIIAGPGSGKTRVVTHRIAYMLQSG-IRPWQIAALTFTNKA 63 Query: 254 AEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 A+EM R+ + + TFH +++ + V + ++ + + Sbjct: 64 ADEMRSRVNLLAPNQPVWMGTFHRFCAQQLRRYAPMVGLAENYSIYDSSDSKSAMKR--- 120 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 ++ ++AS + + + + Sbjct: 121 ----------------------AITAAGVSTSHTSPEQIASAISNAKNRLITPEIMAQQT 158 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFIS---- 429 + + A + ++ L NAVDF L+ +L + + Sbjct: 159 GRAGD-----------TVAAKVYPVYQQQLLTANAVDFDDLLFHFARLLRENPEVRSNLD 207 Query: 430 -PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 K+I+VDE+QD + + A++ AL + L GD Q++Y + GA ++ F + Sbjct: 208 EKLKYIMVDEYQDTNLAQYAIVRALSVDHP--NLAVTGDPDQSVYGWRGADLNNILDFEK 265 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDES---- 544 ++ + L+ YR I VA++ I+ N + +K L + + E Sbjct: 266 DYPAVKTVRLEQNYRSTPEILRVADQLIRHNRRRKQKNLFTDNPTGEAVTLRQYEDGYKE 325 Query: 545 ---QLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQ 601 D + +++ I+ R + + + R QI G + Sbjct: 326 ADGIADEIANQMIAGNAEPRDFAIMCRMNALTRSIEHALRNRGIPYQIV-------NGLE 378 Query: 602 A 602 Sbjct: 379 F 379 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 22/111 (19%) Query: 582 TRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAE 641 ++ MT+HA+KG + V I+ +++ + ++ E Sbjct: 542 FEDSNNRVTLMTLHAAKGLEFPRVFIIAVEDNLLPHRRSKE------------DETQLEE 589 Query: 642 ERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVAR 682 ERRL++V +TRA + + K PS F+ L ++ V Sbjct: 590 ERRLLFVGVTRAEQWLQISYAKLRSFRGENQPAIPSMFLGELPRDEMQVVE 640 >UniRef50_A1A2S5 Putative helicase IV n=2 Tax=Bifidobacterium RepID=A1A2S5_BIFAA Length = 690 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 147/532 (27%), Positives = 240/532 (45%), Gaps = 34/532 (6%) Query: 179 EAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGE 238 + + D +E L+ Q A+ H+ LVLAGAG+GKT+ ++ WLLA Sbjct: 114 ADRIDKARDIIGNIEKHELSDEQISAIAGAGHNTLVLAGAGTGKTTTIIGYIAWLLATKR 173 Query: 239 ASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKV-----PIV 293 A+PE+IL+L+F + +A +M +RI + I A TFH+L L I + + Sbjct: 174 AAPEEILVLSFTKASAGDMSQRIMASTG-KTIRACTFHSLGLEICRAATIANRPIIDGHA 232 Query: 294 SKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDD--EKLQRR 351 S L + K +K + + D + ++ Sbjct: 233 SNAVVRDTFD-RLLAQNIPYRLLAFKLMSKELFGKYGAAAKREDFQLPTDDYAFNQYRQS 291 Query: 352 LASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKR---IKLMAPLLKAWKGALKAENA 408 L + MR + M + ++L+ PL A+ G +A Sbjct: 292 LVENAQTIIQHMRQNNIGIDGMRELNERRGGKHIGRNREMLQLVEPLYNAYVGNFRATQG 351 Query: 409 VDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDD 468 +DF G+I AI + +G + +K++L+DE+QD+S R L+ ALR+Q S TLF VGDD Sbjct: 352 IDFPGMITDAIRCVRRGAYRHLYKYVLIDEYQDMSRPRYELIRALREQ-SDFTLFCVGDD 410 Query: 469 WQAIYRFSGAQMSLTTAFH---ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKK 525 WQ+IYRF+G+ + L F ++G + TT RF + + + F+ Q+ K Sbjct: 411 WQSIYRFAGSDIHLILDFADIWRDWGPTRMFQITTTRRFRQSLIDASGAFVMQDKSLYAK 470 Query: 526 PLNSLTNGDKKAVTL----LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKA- 580 L + ++ ++ E + DA++++L K +++ + S Sbjct: 471 QLRNPSDKKDYSLKALGGATQEERFDAIIEQLRKLPKTASVLMLGRYKSDLNLLSRNDRD 530 Query: 581 -------------ATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIME 627 PK+ I+FMT H SKG Q D+V ++ G GFP+A E + Sbjct: 531 GLFQIDEHTGGIVFLEKPKMDIEFMTAHKSKGLQRDFVFLLCCSGGLKGFPSAIPEEPLL 590 Query: 628 EALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFVEILKNLDVP 679 LLP VE P AEERRL YVA+TR + +++ + ++ PS F+ L + P Sbjct: 591 GLLLPEVERMPHAEERRLFYVAMTRCKKKLFFVVDQSRPSRFMYELHDKICP 642 >UniRef50_D2R6Z4 UvrD/REP helicase n=4 Tax=Planctomycetaceae RepID=D2R6Z4_9PLAN Length = 669 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 93/411 (22%), Positives = 158/411 (38%), Gaps = 54/411 (13%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 S LNP Q AV LLVLAGAGSGKT V+ R L+ G P++IL + F KA Sbjct: 2 SHGLNPEQQEAVDTLRGPLLVLAGAGSGKTRVVTFRMANLIKHGT-QPDRILAVTFTNKA 60 Query: 254 AEEMDERIRERLHTE---DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 A EM R+ L T+ TFH+ + ++++ ++ + K E Sbjct: 61 AAEMQHRLSALLKTKSKIKPQVSTFHSHCVRLLRRHARVLGYPEKFAIYDRGDQESLARG 120 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 + + L +++ W +L Sbjct: 121 VLRDIRVPSDLMR-------------------------PGDLVTQIGSWKTLGIRP---- 151 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KG 425 E R + + L A K ++ AL+ AVDF L+ + + + Sbjct: 152 -------QEAERLASTDKEHLAASGYKKYQKALRHAGAVDFDDLLMLTEELFKIAPQVRQ 204 Query: 426 RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 + + H+LVDE+QD + + ++ AL ++ + VGDD Q+IY + GA++ Sbjct: 205 QEARQFDHLLVDEYQDTNGLQYRIIRALADEHR--NICVVGDDDQSIYGWRGAEVKHILQ 262 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQ 545 F ++ + + L+ YR S I E AN+ I N + K L + G ++ S+ Sbjct: 263 FKNDWPDAKVVRLEWNYRSTSAILETANKLIAYNKHRHDKVLKAARAGGERPRIEQYPSE 322 Query: 546 LDA-------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 ++ + +L + IL R + A + + Sbjct: 323 VEEARQVVADIAFRLKDGTRDPRDFAILFRTNEQPRAIETELRKAKLPYVM 373 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 76/216 (35%), Gaps = 30/216 (13%) Query: 478 AQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKA 537 A + + + + E R + E+ + I + + + + +++ Sbjct: 463 AAIRSFSNLIQRYSEATA-------R-GDSLAELTRKLISETGYEQE-VRRIYPDPEEQQ 513 Query: 538 VTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHAS 597 + L ++ + + L + + + + + I MT+HAS Sbjct: 514 MRLAAVEEVVNSVAAYEAEEEKPSISGYLDQVTLGQREMGDDKEKQLARNAIALMTLHAS 573 Query: 598 KGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRV 657 KG + +V ++GL++G + + + EERRL YV +TRA+ R+ Sbjct: 574 KGLEFPHVYMIGLEDGILPHSRSVKADSQD----------QIDEERRLCYVGITRAQERL 623 Query: 658 WALFNKEN----------PSPFVEILK-NLDVPVAR 682 PS F+ + D P +R Sbjct: 624 TLSLALTRMKWGKPRDTTPSRFLFEIIGQADNPHSR 659 >UniRef50_D0RN21 ATP-dependent DNA helicase PcrA n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RN21_9RICK Length = 742 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 93/410 (22%), Positives = 161/410 (39%), Gaps = 52/410 (12%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 + LN Q AV N E L VLAGAGSGKT VL +R +L+ + + +QIL + F KA Sbjct: 5 LNSLNNQQKLAVSNTEGPLQVLAGAGSGKTKVLTSRIAYLIQQKKCFGQQILCVTFTNKA 64 Query: 254 AEEMDERIRERLHTEDI---TARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 A EM ER+ + ++++ + TFH++ ++++ S+ V + I Sbjct: 65 ASEMRERVLKLVNSKSVAFPWLGTFHSICNKMLRKNSEAVGLKPNFTIIDTLDQIKLIKN 124 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 N + +++A +D+W + + + Sbjct: 125 IL-------------------------SAENIDIKKNPPKQIAFYIDQWKNKALLPEQVK 159 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR---- 426 + + + K ++ L N VDF LI + IL+K Sbjct: 160 LK-----------NQEFNLVNALKVYKIYQKKLLVMNCVDFGDLILHVVTILKKFEDIKK 208 Query: 427 -FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 + +K+ILVDEFQD + + L L + + + VGDD Q+IY + GA++ Sbjct: 209 IYQRNFKYILVDEFQDTNYVQNFWLQLLTSE--KKNICVVGDDDQSIYSWRGAEVKNILE 266 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVT------ 539 F N+ + L+ YR I A I N +L+K + S +K Sbjct: 267 FKNNYQNTQTIKLEQNYRSTENILNSATSLISNNEDRLEKNIWSELGDGEKVKIKSYFDG 326 Query: 540 LLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + + + + ++++ I IL R E+ +I Sbjct: 327 ISEATGVSDIIEQNLSKKFKLNEISILVRAAFQTREFEERFIKIGLPYRI 376 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 56/152 (36%), Gaps = 27/152 (17%) Query: 546 LDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYV 605 DA L+ L + L + + W +I+ MTIH++KG + D V Sbjct: 502 ADARLENLKELKSSMKNYSSLNEF-LENISLQTAIDEEWDGEKINIMTIHSAKGLEFDAV 560 Query: 606 IIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN 665 + G +EG + E EERRL YVA+TRA+ ++ F + Sbjct: 561 FLPGWEEGLFPHQKSIDE----------KGADGIEEERRLAYVAITRAKKELFISFANQR 610 Query: 666 ----------------PSPFVEILKNLDVPVA 681 S F++ + + ++ Sbjct: 611 KFYGRQNDNYDFYSSLQSRFIDEIDDKYTKIS 642 >UniRef50_B2A5W4 UvrD/REP helicase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A5W4_NATTJ Length = 726 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 95/410 (23%), Positives = 164/410 (40%), Gaps = 55/410 (13%) Query: 193 ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 + + LN Q AV G+ +LVLAGAGSGKT VL R +LL PEQIL L F K Sbjct: 6 QLAELNQEQTAAVTAGDGPVLVLAGAGSGKTKVLTYRIAYLLETKGIHPEQILALTFTNK 65 Query: 253 AAEEMDERIRERLHTEDI-TARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 AA EM ER++ + + TFHA + I+++ + + + Sbjct: 66 AAGEMKERVQTIVEGDAPSWVSTFHAACVRILRREIDLLGYGKDFLIYDTRDKTKIVKDL 125 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 + K + + +A ++ + ++ Sbjct: 126 LADFNLDK-------------------------KKYPHQAVAKKISGVKNNLQ------- 153 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR----- 426 P E+ + + +A++ LK ENA+DF L+ + + E+ Sbjct: 154 -----DPRELFYPYD-------EVFEAYQKRLKKENALDFDDLLLLTLRLFEQYPDRLQY 201 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + + +++ILVDEFQD +P + L++ L Q +F VGDD Q+IY F GA + F Sbjct: 202 YQNKFQYILVDEFQDTNPAQNRLISLLSP--PQDNVFVVGDDDQSIYLFRGADVKNILEF 259 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQL 546 + + + L+ YR + I E AN+ + NP + K L + + + + Sbjct: 260 EKTYPNAQVYKLEKNYRSSKTILEAANQVVTNNPSRKSKELWTDNDEGYPLQYYEADDER 319 Query: 547 DA---LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 D + +++ I +L R + + ++ T Sbjct: 320 DEAYFIAEEIRANRYQLPLIAVLYRTNAQSRVLEDIFRKMGISYEVVGGT 369 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 51/153 (33%), Gaps = 25/153 (16%) Query: 542 DESQLDALLDKL---SGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASK 598 + + ++ + + E + H + Q+ MT+H++K Sbjct: 489 EAETRMENVREIYSMAKEFEAEGGETLQEFLTHSTLMGDIDTWEDEEQAQVVMMTLHSAK 548 Query: 599 GQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVW 658 G + V + GL+EG + + EERRL YV +TRA ++ Sbjct: 549 GLEFPGVFLTGLEEGVFPH------------IRTYDSEASMEEERRLCYVGITRAEQVLY 596 Query: 659 ALFNKEN----------PSPFVEILKNLDVPVA 681 + +E PS FV + Sbjct: 597 LTWARERTLNGMTRMLQPSRFVSEIGEDLKDTQ 629 >UniRef50_B9AEJ9 Putative uncharacterized protein n=2 Tax=Methanobrevibacter smithii RepID=B9AEJ9_METSM Length = 858 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 132/531 (24%), Positives = 233/531 (43%), Gaps = 39/531 (7%) Query: 178 TEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARG 237 + L + A FF + L+ Q A + + L ++AGAG+GKT L+A+A +L+ + Sbjct: 14 LKNELKDNASFFDNFDGKSLDEQQRIACILNDCDLEIIAGAGTGKTHTLLAKAEYLIEKK 73 Query: 238 EASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKK-----VPI 292 SP+ IL L+F + EE+ E++ + T T H+ L +I + K Sbjct: 74 NISPDDILFLSFSKSCVEELIEKLNYNVPT-----STIHSFGLSLINEYRDKEVYDGRGF 128 Query: 293 VSKLENDTAARHELFIAEWRKQCSEKKAQAKGWR-----------QWLTEEMQWSVPEGN 341 E + I + C + L + S + Sbjct: 129 KKIFEEYLKTASDKQIDDITNYCENNLNSHDMIKLIELDREIEKFNHLISKSNISSRIKS 188 Query: 342 FWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKG 401 F D K + +AS + S + + + ++ I+++ P+ + ++G Sbjct: 189 FIDLFKGKGYVASDFKKIKSKCKHDFETNNGGYYTNKNYLNNM--AFIQIVEPVFRFYEG 246 Query: 402 ALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTT 461 L + +DF+ +I++AI ++EK + +K+I VDE+QDIS + + L KQ Sbjct: 247 YLFRNHLIDFNDMINKAIDLVEKEGIFNNFKYIFVDEYQDISYKNFQFIKTL-KQACNAH 305 Query: 462 LFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPG 521 L VGDDWQ+IY F + ++L F + F R ++ TYR + ++A FI +N Sbjct: 306 LVVVGDDWQSIYGFRDSDITLFNDFCDYFPNANRVFIEKTYRNPQELIDIAGNFIMKNES 365 Query: 522 QLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKA- 580 Q KK L S + +K V ++ +S D++ + + +K E++ IL RY+ + Sbjct: 366 QFKKSLKSDKSI-EKPVKIIFDSDSDSIYNLIYNLSKDNEKVFILGRYNGDIDKFIFDTD 424 Query: 581 -------------ATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIME 627 +++ TIH +KG +ADYV+++ + GFP Sbjct: 425 LVKKSKGSYKQITNDYESIKNVEYRTIHKAKGLEADYVVLINVFNRDWGFPNKFYPPYFV 484 Query: 628 EALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFVEILKNLDV 678 + D EERRL YVA+TRA+ V+ N S +++ L + + Sbjct: 485 NLIQDWDYDKKLEEERRLFYVAITRAKKGVYIFTEDYNQSEYIDELIDENN 535 >UniRef50_B3PNG5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PNG5_MYCA5 Length = 726 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 83/419 (19%), Positives = 152/419 (36%), Gaps = 55/419 (13%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 ++ + LN Q AV+ + +L ++AGAGSGKT VL + +L+ SP IL L F Sbjct: 2 KKNDFDSLNEQQKSAVIFTDGALRIIAGAGSGKTRVLTYKIAYLIENRNVSPGDILALTF 61 Query: 250 GRKAAEEMDERIRERLHTED--ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 KAA EM +R L + T TFH+L I++ + + + + Sbjct: 62 SNKAANEMRDRAYGALEKTNEYPTVSTFHSLCARILRSEIHNFDYPNDFQILDESDQKQV 121 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 + + +AQ + S + + + Sbjct: 122 LKIVYTELGISQAQ-------------------------YTFGSIISFIQNQKNNLVAPE 156 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK--- 424 A+ ++ + K+++ L +++DF L+ + Sbjct: 157 DLLADEDSAKDPRTL------------IYKSYQERLNNAHSLDFDDLLVFVYRLFYDPKF 204 Query: 425 ----GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQM 480 ++ +K++L+DEFQD S + ++ L + VGD Q IY + A + Sbjct: 205 EEISHKWSKRFKYLLIDEFQDTSELQYKIVKILAGSG---NITVVGDPDQTIYSWRNADI 261 Query: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL 540 ++ F ++F E L+ YR +I AN I N +L K L + + Sbjct: 262 NIIMNFDKDFPEAVTIKLEQNYRSTKKILNAANNLISYNKFRLDKKLFTDNEEGEDIDFY 321 Query: 541 L------DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 + ++ + + +L + I IL R A E ++ T Sbjct: 322 CGFSEEAEARKIASKISELKRKRVQLKNIAILFRISSYSRAIEEALINENTIYKLFGST 380 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 34/121 (28%), Positives = 47/121 (38%), Gaps = 16/121 (13%) Query: 568 RYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESI-- 625 Y ++ + MTIH +KG + DYV +VGL E A S Sbjct: 533 EYLQEITLITDRDVEDDAASYVSLMTIHNAKGLEFDYVFVVGLSEDIFPLRRAITISPKF 592 Query: 626 ---------MEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN-----PSPFVE 671 EE P EERRL YVA+TRAR +++ + PS F++ Sbjct: 593 DFTYLPFEKEEELQKQPENIEGLEEERRLAYVAMTRARTKLFLSYAVNRRGLNKPSRFLK 652 Query: 672 I 672 Sbjct: 653 E 653 >UniRef50_Q21PD1 ATP-dependent DNA helicase Rep n=15 Tax=Gammaproteobacteria RepID=Q21PD1_SACD2 Length = 672 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 96/414 (23%), Positives = 153/414 (36%), Gaps = 54/414 (13%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + LNP Q AV + LVLAGAGSGKTSV+ + +++ I + F KAA Sbjct: 2 TTLNPRQKEAVHYIDGPSLVLAGAGSGKTSVITRKIAYMIQECGIPARHIAAVTFTNKAA 61 Query: 255 EEMDERIRERL---HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 EM ER+ + + +T TFH L L+II++ K + S I E Sbjct: 62 REMKERVTKLVKGSAARGLTVSTFHNLGLNIIRREHKTLGFKSGFTIFDQEDARGLIKEI 121 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 + + + + S++ W + + Sbjct: 122 M--------------------------LKDGDTNTDMIDLVQSQISNWKNGLIEPD---- 151 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR----- 426 E + S+ + A + + + ALKA NAVDF LI + + Sbjct: 152 -------EALSKAQSEGEQTWALVFERYNKALKAYNAVDFDDLIRLPSKLFSEHPEVLNR 204 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + +++LVDE+QD + + ++ L TL VGDD Q+IY + GA+ + Sbjct: 205 WQQRIRYLLVDEYQDTNSSQYKVVQQLIGDRG--TLTVVGDDDQSIYAWRGARPENMSLL 262 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL----- 541 +F L+ YR +RI + AN I NP + K L S + + Sbjct: 263 KVDFPSLHVIKLEQNYRSTARILKAANVLIANNPHEFDKTLWSDLGMGETIRVIKCPTED 322 Query: 542 --DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 E +L + + +L R +H K I T Sbjct: 323 AEAERVATEILTQRLRRQCKFKDFAVLYRGNHQARLMELKLQHHQIPYNISGGT 376 Score = 118 bits (296), Expect = 7e-25, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 64/181 (35%), Gaps = 30/181 (16%) Query: 516 IQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERI-------LILAR 568 I++ + N V ++ L++ + + +E + A Sbjct: 477 IREMIDDIDYEGWLHQNASSPKVAEKRFENVNILVESIKNSLERDENEDADGEERINTAI 536 Query: 569 YHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEE 628 + LE+ ++ MT+HASKG + +V ++GL+E + E + Sbjct: 537 SKLLLQDMLERQEEEDETDRVQLMTLHASKGLEFPHVFLLGLEEEILPHRNSIEEDNI-- 594 Query: 629 ALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDV 678 EERRL YV +TRA+ + PS F++ L DV Sbjct: 595 -----------EEERRLAYVGITRAQRTLTMTLAGTRKQFGEKQTTTPSRFLDELPPEDV 643 Query: 679 P 679 Sbjct: 644 E 644 >UniRef50_Q98PM4 ATP-DEPENDENT HELICASE PCRA n=1 Tax=Mycoplasma pulmonis RepID=Q98PM4_MYCPU Length = 734 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 89/412 (21%), Positives = 165/412 (40%), Gaps = 49/412 (11%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 S LN Q AVV + L ++AGAGSGKT V+ ++ +L+ + +P +IL L F KA Sbjct: 2 LSNLNQRQKEAVVYTKGPLRIIAGAGSGKTRVITSKIAYLIEHEKIAPWKILGLTFTNKA 61 Query: 254 AEEMDERIRERLHTED--ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 A EM ER + + + + TFH+L I++Q K+ E + + + Sbjct: 62 AREMKERALKMIGPKASHVELSTFHSLCNVILKQDIDKIGYPKNFEIVDESDKKQILKGI 121 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 + + W + +++ M+ + Sbjct: 122 YLELAITTKDVSIWDAF-----------------------------DYIAKMK-----KN 147 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGR 426 + +S EE+ + + + L+ + K + LK ++ +DF LI + + + Sbjct: 148 KYFSSIEEELDNENEEDLALLKNIYKGYVSYLKKQSLLDFDDLIILTYELFSSSDLTRQK 207 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + S + ++LVDEFQD S + ++ L + VGD Q IY + G+ + F Sbjct: 208 WASKYDYVLVDEFQDTSFIQYEIVKVLAS---NKNITIVGDPDQNIYSWRGSDFRIMLNF 264 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQ- 545 ++F + + + YR I E+AN+ I+ N +++K L S + + L + Sbjct: 265 DKDFENTKTINFEQNYRSTPNILEIANKLIKNNKNRMEKNLFSTSARGADPLFLTKYNNK 324 Query: 546 --LDALLDKLSGY--AKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 +++K+ +I I R E+ I T Sbjct: 325 LEAKWIVEKIIELSQQTKYSQIAIFTRTAKYSRDLEEELFQNSIPYVIYGGT 376 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 56/144 (38%), Gaps = 23/144 (15%) Query: 544 SQLDALLDKLSGYAKPEERI--LILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQ 601 Q+D +D+L E +L + + L Q+ MT H++KG + Sbjct: 501 DQVDFDIDQLYESIAFWEEENPELLLDDYLNEISLLTSGDQNENSDQVSIMTAHSAKGLE 560 Query: 602 ADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALF 661 DYV I GL E + + + ++ EERRL YVA+TRA+ +++ Sbjct: 561 FDYVFITGLAEKHFPHFLSLKSNDYDD---------EIEEERRLCYVAVTRAKKQLFLTA 611 Query: 662 NKE------------NPSPFVEIL 673 S F+E + Sbjct: 612 PLTLYWARDREKEELEISRFIEEM 635 >UniRef50_C0WAB3 ATP-dependent DNA helicase pcrA n=1 Tax=Acidaminococcus sp. D21 RepID=C0WAB3_9FIRM Length = 750 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 79/424 (18%), Positives = 142/424 (33%), Gaps = 76/424 (17%) Query: 193 ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 S LN QA AV + +L+LAGAGSGKT L R +LL +G P IL + F K Sbjct: 4 LLSSLNTQQAEAVKHVAGPILILAGAGSGKTKALTTRIAYLLEKG-VPPYSILAITFTNK 62 Query: 253 AAEEMDERIRERLHT--EDITARTFHALALHIIQQGSKKV---PIVSKLENDTAARHELF 307 AA+EM ER+ + + +D+ TFH ++++ K + + + Sbjct: 63 AAKEMRERVDKLVGPLAKDVWLYTFHGFCNQLLRREIKHLSHYGYGTGFSIYDTTDCKNV 122 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 + K + + S + + Sbjct: 123 LKGILKDLKMDEKF-------------------------YPLSAVMSVISNAKNAQLSSA 157 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAV---------------DFS 412 R K +A + ++ ++ NAV D Sbjct: 158 AF-----------ARKADDFHAKKVAEIYLEYEKRMRQNNAVDFDDLLLLSVDLLQHDRD 206 Query: 413 GLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAI 472 + ++ ++++++DE+QD + + L + + L AVGD Q+I Sbjct: 207 ----------VREKYQHKFQYVMIDEYQDTNHVQYLLAKLISA--PENNLCAVGDIDQSI 254 Query: 473 YRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTN 532 Y + GA +S F +++ + + L+ YR I + AN I+ N + K L + Sbjct: 255 YGWRGADISNILDFEKDYPDAKIYKLEQNYRSTQVILDAANAVIEHNSARRPKNLWTENG 314 Query: 533 GDKKAVTLL-------DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWP 585 K E + + + +L R + E Sbjct: 315 NGKPITYFQAFNDRNEAEFTVHNMRRLRDEAHFHLGDMAVLYRTNAQSRMFEETLIKNGL 374 Query: 586 KLQI 589 + Sbjct: 375 PYIM 378 Score = 121 bits (304), Expect = 8e-26, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 22/105 (20%) Query: 587 LQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLM 646 + MT+H++KG + V + G++EG + ++ EERRL Sbjct: 552 DAVTLMTLHSAKGLEFPVVFMAGMEEGLFPSQRSLDDTD------------KLEEERRLC 599 Query: 647 YVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVA 681 YV +TRA+ +++ + PS F+E + + A Sbjct: 600 YVGITRAKKKLFLTSCRSRMMYGRTVMFPPSRFLEEIPRHLIETA 644 >UniRef50_B2S250 Rep helicase, single-stranded DNA-dependent ATPase n=4 Tax=Treponema RepID=B2S250_TREPS Length = 657 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 106/420 (25%), Positives = 153/420 (36%), Gaps = 64/420 (15%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 S LNP Q RAV E LL++AGAGSGKT V+ AR ++L G +IL L F KA Sbjct: 2 LSTLNPEQRRAVTTLEGPLLIIAGAGSGKTRVITARIAYMLECGILQ-SRILALTFTNKA 60 Query: 254 AEEMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 A EM ERI+ + T TFHA + I+++ + I E Sbjct: 61 AHEMSERIKALTGKPLRNTTVSTFHAFGVTILREHIHVLGWRKNFSIYDENDKRALIREA 120 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 K+ D + ++ + +L + +A Sbjct: 121 AKEVHLLP---------------------EVLDTNCVSTLFSAIKMQRKNLKELQHKERA 159 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR----- 426 L + ALK NAVDF LI I I + Sbjct: 160 -----------------------LWHEYHTALKLFNAVDFDDLIVLPIQIFSEYPDILAS 196 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + S + +ILVDEFQD S Q+ L+ L Q + VGDD Q+IY + GA +F Sbjct: 197 YKSRYHYILVDEFQDTSAQQYRLMKMLATQ----NICVVGDDDQSIYSWRGAHHDNILSF 252 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQL 546 ++F L+ YR I AN I N + +K L S + K E++ Sbjct: 253 EKDFPYATEITLEQNYRSTGTILAAANGVIAHNTQRKEKALWSGNDSGKPIEIFNPETER 312 Query: 547 DALL--------DKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASK 598 D + +++ ++L MR P M+ K Sbjct: 313 DEAIFIANTILAEQIRASYSFSSFGVLLRTNSFMRIIEDVFLQENIPYRVSGGMSFFQRK 372 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 31/143 (21%), Positives = 52/143 (36%), Gaps = 22/143 (15%) Query: 546 LDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYV 605 L + + + L Y + + + + MTIHASKG + V Sbjct: 501 QIEHLVESIEHWEQSSEHGSLYDYLNRVTLLARDNVQKETEGAVSLMTIHASKGLEFPVV 560 Query: 606 IIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN 665 I G++ G+ + E EERRL YVA+TRA+ +++ + Sbjct: 561 FIAGVEAGTIPHERSIE------------EVHSIEEERRLFYVAITRAKEKLYLTHCRTR 608 Query: 666 P----------SPFVEILKNLDV 678 SPF++ + V Sbjct: 609 KRGGKREERTASPFLDEIPKHLV 631 >UniRef50_Q1DAU6 ATP-dependent DNA helicase, UvrD/REP family n=6 Tax=Cystobacterineae RepID=Q1DAU6_MYXXD Length = 691 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 91/412 (22%), Positives = 151/412 (36%), Gaps = 53/412 (12%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLAR--GEASPEQILLLAF 249 ++ S LNP Q AVV E LLVLAGAGSGKT V+ R LL G IL + F Sbjct: 1 MDLSKLNPPQREAVVTLEGPLLVLAGAGSGKTRVITHRIVHLLNERPGLIMARNILAVTF 60 Query: 250 GRKAAEEMDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 KAA EM ER+ + TFHA ++++ ++ K Sbjct: 61 TNKAATEMKERLVHMAGPRAQGVLVCTFHAFGAEMLREDIHRLGWPKKFAIADMGDQLAN 120 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 I ++ D R++ + + + + + Sbjct: 121 IRRAMREHKID-------------------------DRSFDARKVLNLISKAKNSGKAPE 155 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR- 426 + + + ++ +LKA+ +VDF L+ +L + Sbjct: 156 PKPEGI-----------GDDYDLITHMVYPDYQLSLKAQGSVDFDDLLLLPARLLREHPD 204 Query: 427 ----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + ++++LVDEFQD + + LL L + AVGDD Q IY + GA++ Sbjct: 205 LYEKYTKRFRYLLVDEFQDTNTAQLELLKLLA--GRSRNVCAVGDDDQCIYSWRGAEVRN 262 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD 542 F F G+ L+ YR + + AN I +NP + K + + G K + Sbjct: 263 ILDFDRLFPGGKEVRLEQNYRSVQTVLDAANAVIAKNPERKAKQMWTDRTGGTKVKVVTC 322 Query: 543 ESQLDA------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 + + + K + I +L R + E + + Sbjct: 323 PNDEEEARFVAHEIQKHMALGISADDIAVLYRTNGQSRPIEETLREKNIGYE 374 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 39/200 (19%), Positives = 67/200 (33%), Gaps = 27/200 (13%) Query: 496 CDLDTTYRFNSRIGEVAN---RFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDK 552 DL YR G++AN + +++ + ++ + + L++L + Sbjct: 461 VDLVERYRAAYEHGQLANVTRKLLEEIGFREATRAHATSATAADKKLKGVDGVLNSLENF 520 Query: 553 LSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQE 612 L R E+ ++ MT+HASKG + V +G++E Sbjct: 521 EKREGPKASLPTYLNRLSLDTRQEEEEVPGANR--RVTLMTVHASKGLEYRLVFFIGMEE 578 Query: 613 GSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN------- 665 E EERRL YV +TRA+ ++ Sbjct: 579 DLMPH------------GGMQGEAQNLEEERRLCYVGITRAKEVLYLTRAATRVKRGKEV 626 Query: 666 ---PSPFVEILKNLDVPVAR 682 PS F+E L + V Sbjct: 627 PRTPSRFLEDLPPEVIEVVE 646 >UniRef50_Q0AZZ6 ATP-dependent DNA helicase PcrA n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AZZ6_SYNWW Length = 696 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 83/408 (20%), Positives = 147/408 (36%), Gaps = 52/408 (12%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + LN Q AV + + +VLAGAGSGKT VL R L+ +G P +I+ + F KAA Sbjct: 6 ADLNEQQKEAVAHVDGPCMVLAGAGSGKTRVLTRRIVHLVKQG-IPPHRIMAITFTNKAA 64 Query: 255 EEMDERIRERLHT-EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 +EM R+ L +TFH+ I++ +++ + I + Sbjct: 65 QEMRSRVISMLPDFNSQWIQTFHSTCNRILRMDIQELGFDKYFSIIDDTEAKSLIKTLLR 124 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 + ++ + +A+ + ++ + + R R Sbjct: 125 EENDYETKAEELLYIFKQAKNSLEKPEKYFYSFAVPDFIKERNCR--------------- 169 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FI 428 + + LK N +DF LI I + ++ + Sbjct: 170 ---------------------VFSLYNSRLKNLNVLDFEDLIVLCIRLFQQNPDVLEKYQ 208 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 +++I+VDE+QD + + L ++ +F VGD Q+IY + GA+ F Sbjct: 209 GWFQYIMVDEYQDTNYSQYFWARLLASRHH--NIFVVGDPDQSIYSWRGAEPYNIKRFLG 266 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL------- 541 ++ + L+ YR + I AN I N + +K L + +K V Sbjct: 267 DYPDSRLIKLEMNYRSSGNILSAANAVICNNEEREEKQLYTQKGQGEKLVHFCAGDSFQE 326 Query: 542 DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 D + L + + + R H A E R I Sbjct: 327 ARFIADEINQLLRSENRHFQDFAVFYRTHAQSRALEEALLYRNIPYHI 374 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 48/147 (32%), Gaps = 24/147 (16%) Query: 542 DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATR-WPKLQIDFMTIHASKGQ 600 D L +L ER + +L + + + MT+H +KG Sbjct: 500 DAEARIENLQELRSLVVEFEREGGQGLEEFLSQTALVQESDELDNSDHVLLMTLHGAKGL 559 Query: 601 QADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWAL 660 + V I GL+EG + EERRL YV +TRA+ R++ Sbjct: 560 EFPVVFITGLEEGVFPSYRSQTAE-------------EMEEERRLCYVGITRAQERLYLS 606 Query: 661 FNKEN----------PSPFVEILKNLD 677 PS F+ + Sbjct: 607 HALSRLLYGYERSNPPSRFLYEIPEEL 633 >UniRef50_D2MPE9 Putative ATP-dependent helicase PcrA n=1 Tax=Bulleidia extructa W1219 RepID=D2MPE9_9FIRM Length = 710 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 89/409 (21%), Positives = 156/409 (38%), Gaps = 50/409 (12%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 ++ LNP Q AV++ L V+AGAGSGKT VL R +L+ + P +IL + F Sbjct: 2 LDIQSLNPQQKEAVLDEHQYLRVIAGAGSGKTRVLTMRIAYLMEEKKVWPSKILAITFTN 61 Query: 252 KAAEEMDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIA 309 KAA EM+ R+ + E T T H+L + I++Q + + + + Sbjct: 62 KAAREMETRVLSLMKEEVSKPTVCTIHSLCVRILRQEIEAMGYPKSFTILDVEDQKAILK 121 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 E+ K+ S K + + S + Sbjct: 122 EYYKEHSVDKNEIS-----------------------------------FASALSYISNN 146 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK----- 424 + E ++ FS K + + + K A+DF LI + + ++ Sbjct: 147 KTENVSVEEANKIADFSSLEKKKVKIYEYYLHRQKELFALDFDDLILWTVRLFDRFEVVL 206 Query: 425 GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT 484 ++ + +ILVDEFQDI + L+ L + +L VGD Q IY + GA + + Sbjct: 207 QKWQQHFHYILVDEFQDIDRIQYQLIKQLTGK--DNSLLVVGDPDQTIYTWRGADVRIIV 264 Query: 485 AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL---- 540 F ++F + L YR S I + AN I+ N ++ K L + +K Sbjct: 265 NFEKDFSNTKTILLTQNYRSTSSILKGANSVIKNNKQRVDKELFTDNQSKEKIYHFSAGS 324 Query: 541 --LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKL 587 + + + + + +L R +++ A + Sbjct: 325 DEYQAAWIAQEMKSIRLKTGTYSEMAVLYRANYLSRALEKALMDERIPY 373 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 20/100 (20%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 + MT+HASKG + D V + L EG + +E EERR Sbjct: 540 ENDFVQLMTVHASKGLEFDTVFVSDLNEGIFPSERSLQEGY-----------HGVEEERR 588 Query: 645 LMYVALTRARHRVWALFNK---------ENPSPFVEILKN 675 L YVA TRAR ++ + PS F++ +++ Sbjct: 589 LAYVAFTRARKHLYLTDAGGYSFMLQRVKTPSRFIDEIED 628 >UniRef50_P75438 Probable DNA helicase MPN_340 n=1 Tax=Mycoplasma pneumoniae RepID=Y340_MYCPN Length = 529 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 109/514 (21%), Positives = 186/514 (36%), Gaps = 73/514 (14%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q AV +V +GAG+GKT+V+ R +L+ +P+ IL F KAA E Sbjct: 4 LNQEQKAAVTCDNGVNVVYSGAGTGKTTVIAERFAYLVNEKGVNPQSILAFTFTDKAASE 63 Query: 257 MDERIRERLHTE---DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 M +RI + + + D+ TFH+ A +Q+ S + + E Sbjct: 64 MRQRIIKLIPQKSLQDLHIYTFHSFANRFLQKHG-----KSDFAILSDSNRFFSDYEMGD 118 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 Q K L + +L A Sbjct: 119 QLQTVVEIYKNKVVDLELD----------------------------NLEYNSAFRDACT 150 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFI----- 428 + + K A L+A++ L N DFS LI + +L+ + Sbjct: 151 DTFNEDFSTISNGQFRKRAATALRAYQNYLITNNLFDFSDLIIETCHLLKGNSELLQAFT 210 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 +ILVDEFQD + + L+ L + LF VGD Q IY + GA + + Sbjct: 211 ESVHYILVDEFQDTNLAQYELVKLLATTHP--NLFLVGDSNQMIYGWRGAVVEIFELLKN 268 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRF---IQQNPGQLKKPLNSLTNGDKKAVTL----- 540 +F + YR + VAN I + + L+S + V Sbjct: 269 DFQAVKEFYTTQNYRSIQAVLAVANDVLTAIARKERKALVLLHSSIDSKAVPVHYKANSL 328 Query: 541 --LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRW--PKLQIDFMTIHA 596 D+ + + P +++ +L R + A + P +++ +TIHA Sbjct: 329 KNQDQWIIYQMKQLHLNNGVPYDQMAVLFRKNKHLDAFSQTVLEDGDLPLAKLNLLTIHA 388 Query: 597 SKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHR 656 +KG + + V + GL E + + EE +L YVA+TRA+ Sbjct: 389 AKGLEFEAVFVYGLVERAFPSLH-----------WDGSDKHKLLEEMKLFYVAITRAKQF 437 Query: 657 VWALF-------NKENPSPFVEILKNLDVPVARK 683 ++ + PS F+++++ + + Sbjct: 438 LFLVSVSVESFNAYYEPSRFLKLIEKEHLQTQKA 471 >UniRef50_B0TWY9 DNA helicase II n=19 Tax=Francisella RepID=B0TWY9_FRAP2 Length = 742 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 88/409 (21%), Positives = 157/409 (38%), Gaps = 55/409 (13%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 S LNP Q +A + + + L+LAGAGSGKT VL +R +L S E IL + F KA Sbjct: 7 LSGLNPQQKKATLLEDRNSLILAGAGSGKTKVLTSRIAYLCRDKGVSVENILAVTFTNKA 66 Query: 254 AEEMDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 A+E+ R+ + L + TFH +A ++++ + ++ + I + Sbjct: 67 AKEIQHRVEKMLGISTFGMWIGTFHGIAHRLLRKHAHELGLDKNFRILDQDEQAQLIKKV 126 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 K + D + + L + +++ Sbjct: 127 IKSL-------------------------DLDDKKYPPKLLQNFINKQKDKAVRSNKLTK 161 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGR 426 + + + A++ L +NA+DF+ L+ + + Sbjct: 162 QYDIN---------------YTHIYTAYEERLLLDNALDFADLLLYLYELFSLNQQLREY 206 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + S +++IL+DEFQD + + L L N+ AVGDD Q+IY + GA + + Sbjct: 207 YQSLFRYILIDEFQDTNQVQYMWLKLLVTDNNYM--MAVGDDDQSIYGWRGAVVDNIHKY 264 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL----- 541 + + E L+ YR I +VAN I+ N ++ K L S +K Sbjct: 265 VADLNDVEIIKLEQNYRSTKNILKVANSVIKNNDNRMSKELWSAAEDGEKVEVYCAVNER 324 Query: 542 -DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + + + +L I IL R +++ E +I Sbjct: 325 DEAKYIIDKIRQLHDGGVDYSDIAILYRSNYLSRVLEESCIYTSIPYRI 373 Score = 115 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 57/157 (36%), Gaps = 17/157 (10%) Query: 539 TLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEK-------AATRWPKLQIDF 591 T D ++D L + +S E +I +L + L + Sbjct: 496 TEKDRQKIDNLKELISAAKDFEPQIELLDDNTDILQDFLSFAVLEAGEMQADENTDSVQL 555 Query: 592 MTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALT 651 MTIHASKG + YV +V +EG + + AEERRL YVA+T Sbjct: 556 MTIHASKGLEFRYVFLVAAEEGVFPPSSIINAEEAYTSSESKKIQEKLAEERRLFYVAVT 615 Query: 652 RARHRVWALFNKEN----------PSPFVEILKNLDV 678 RA + + + S F+ + + + Sbjct: 616 RAMKALTISYAQVRNIFGRSSFQVKSRFLMEIDSEHI 652 >UniRef50_B0VGK7 Superfamily I DNA and RNA helicases n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VGK7_9BACT Length = 732 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 85/413 (20%), Positives = 158/413 (38%), Gaps = 49/413 (11%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 +S LN Q V + E+ +LVLAGAGSGKT L+ R +L+ + P IL++ F Sbjct: 10 NNFYASQLNERQLEVVTDTENPVLVLAGAGSGKTRSLIYRTAYLIKEKQVHPWNILIVTF 69 Query: 250 GRKAAEEMDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 KAA E+ ER+ + L + TFHA+ I++ S +P + + Sbjct: 70 TNKAARELQERLEKLLNIPVRSLWVGTFHAICCRILRFESAHLPFNANFSIYDEDTQKSL 129 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 + + K+ K + +R+ R+ + + Sbjct: 130 LKKIYKEYGFDKQSF-------------------------PINNILTRISRYKNKL---- 160 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-- 425 M+ + + + + ++ L A+DF ++ +L Sbjct: 161 -----MLPEDIKFQGEDKDSEFATFLNIYRLYQQQLLLNQALDFDDILLWTAKLLLNNNT 215 Query: 426 ---RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 ++ + ++++++DE+QD + + ++ + + + + VGDD QAIY F GA + Sbjct: 216 VREKYRAQFQYVMIDEYQDTNKAQFEIVHQIAGGHQR--VCVVGDDDQAIYSFRGASLRN 273 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD 542 F +++ L+ YR I +AN I N + K L S K V + Sbjct: 274 ILEFEKDYNSVHSIRLEQNYRSTGNILALANAVIANNRRRHSKELWSELPVGDKPVLAVY 333 Query: 543 ESQLDA------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 E++++ + KL P I +L R + I Sbjct: 334 ENEIEEANRITDAILKLQRKGIPLREIAVLYRTNAQSRVFESALIQAEIPYSI 386 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 61/180 (33%), Gaps = 33/180 (18%) Query: 526 PLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPE----ERILILARYHHMRPASLEKAA 581 L S + L + +S +++ ER ++A Y + Sbjct: 499 ELISHYQNSNDPQDIARAENLVEFVTSVSEFSEHFYQENEREPLIADYLPYVALQTDLDR 558 Query: 582 TRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAE 641 + I MT+H +KG + + V I GL++ E Sbjct: 559 VKENMDSIRLMTLHNAKGLEFEAVFIAGLEDELLPHRMCMNNQD------------SIEE 606 Query: 642 ERRLMYVALTRARHRVWALFNKEN----------PSPFVEILK-------NLDVPVARKP 684 ERRL YV +TRA++ + + K PS F+ + + D +A+ P Sbjct: 607 ERRLFYVGITRAKNYLHLSYTKSRRLYDTFYFPVPSQFLTEVDSRLFYHSDGDFGIAQPP 666 >UniRef50_Q5KJH7 ATP-dependent DNA helicase pcra, putative n=2 Tax=Filobasidiella neoformans RepID=Q5KJH7_CRYNE Length = 982 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 85/410 (20%), Positives = 165/410 (40%), Gaps = 42/410 (10%) Query: 194 SSPLNPAQARAVVNGEH-SLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 + LN AQ +AV L +LAG GSGKT VL R +L+ + SP +I+ + F K Sbjct: 14 LASLNQAQLKAVTASPSVPLQILAGPGSGKTRVLTCRVAYLVQHHKYSPNEIVAVTFTNK 73 Query: 253 AAEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIA 309 +A EM +R+++ L + + TFHA + +++ K + + + A + ++ Sbjct: 74 SANEMRKRLQKLLGDKQADQLVLGTFHATCVKYLRRYGKLINLSNNFVIADAEDCKKIMS 133 Query: 310 EWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGA 369 K +A + + + S + + + Sbjct: 134 GILKSRKAALDEASMSLK---------------------EGVVLSEISKAKAKGE----- 167 Query: 370 QAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-FI 428 E +A + ++ F+ + ++A L + ++ AL N++DF L+ A+ + ++ + Sbjct: 168 PPEAMAIRAAQNKNAFTNTLAVIADLYEEYQLALTEANSLDFDDLLLYALRLFKEAPRVV 227 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 +HILVDEFQD + + LL K + + VGD Q+IY + A++ + Sbjct: 228 ENIRHILVDEFQDTNTTQYELLKRFAKAHKGVS--VVGDPDQSIYGWRSAEIENLNKMTK 285 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKA---VTLLDESQ 545 +F E L+ YR I + A+ + Q+ +++K L + V + Sbjct: 286 DFPGVEAIYLEENYRSTGSILDAAHAIVSQDRQRIQKSLFTSHPKSAPVTLKVFSTPVIE 345 Query: 546 LDALLDKLSGYAKP------EERILILARYHHMRPASLEKAATRWPKLQI 589 + ++ + IL RY+ + +I Sbjct: 346 ASFISTEIKRLIAYSGGLLRYDDFAILLRYNALSRVIESSLQKDSIPNRI 395 Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 14/133 (10%) Query: 526 PLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWP 585 + S + ++ L+ + + + + Sbjct: 657 DVKSKKEVVDGVKQINVADAPSDSVESLANAPDNLTPLAYFLQTSMLSTDTESGQDDAST 716 Query: 586 KLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRL 645 ++ MT+HA+KG + V I +++G+ FP+ AEERRL Sbjct: 717 P-KVTIMTVHAAKGLEWPVVFIPAVEQGT--FPSYRCTEP-----------HEIAEERRL 762 Query: 646 MYVALTRARHRVW 658 +YVA+TRA+ ++ Sbjct: 763 LYVAMTRAQSFLF 775 >UniRef50_A8R903 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=A8R903_9FIRM Length = 729 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 81/399 (20%), Positives = 152/399 (38%), Gaps = 51/399 (12%) Query: 204 AVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRE 263 AV + L ++AGAGSGKT V+ R +L+ + P +IL + F KAA EM ER+ Sbjct: 14 AVTCVDRHLRIIAGAGSGKTRVVTTRIAYLIEQCHIYPNKILAITFTNKAAREMKERVEG 73 Query: 264 RLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQ 321 L + + T H+ + ++++ A + + KQ Sbjct: 74 FLGDTAQAVMISTIHSFCVRLLREDILVHGYPRNFTILDADDQRSILRDAYKQLQVDVKT 133 Query: 322 AKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEI 381 R+ ++S + + +A A E Sbjct: 134 YSY-----------------------------HRVLSYISNNKTNFIDANSALARANYEG 164 Query: 382 RDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RFISPWKHILV 436 ++MA + ++ L +DF L+ IL++ ++ + ++ V Sbjct: 165 -------ERIMANVYAFYEKRLAEMFGLDFDDLLIFTYHILKEHVEVRKKWQRRFTYLHV 217 Query: 437 DEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERC 496 DEFQD+ + ++ L K++S L VGD Q IY + GAQ+ + F ++F Sbjct: 218 DEFQDVDMLQYQIIKMLVKEDSY--LCVVGDPDQTIYTWRGAQVDIIMNFEKDFPHSHTV 275 Query: 497 DLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVT------LLDESQLDALL 550 L+ YR I + +N I+ N +++K L + D++ V + + + Sbjct: 276 ILNENYRSTQPILQASNELIKNNRNRIEKELFTRNESDERIVHFTAMDDYNEPIWVAGKI 335 Query: 551 DKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 L I +L R +++ + + +I Sbjct: 336 LSLHHNGVKYRDIAVLYRSNYLSRGLEKALLDQHIPYRI 374 Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 55/163 (33%), Gaps = 28/163 (17%) Query: 540 LLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATR--------WPKLQIDF 591 ++ + DA +++L + I + + Sbjct: 493 YMEMLRNDAEIERLENLKELISDIANYVENNPDGSLLDYLQEISLYSDKEDLDNGEFVQL 552 Query: 592 MTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALT 651 MTIHA+KG + D V + L +G + E EERRL YVA T Sbjct: 553 MTIHAAKGLEFDRVFVYSLCDGIFPNERSINEG----------GQQALEEERRLAYVAFT 602 Query: 652 RARHRVWALFNK---------ENPSPFVEILKNL-DVPVARKP 684 RA+ +++ + + S FV+ + V KP Sbjct: 603 RAKKQLFLSDSYGYSYVLDKLKTTSRFVKEIPQDCLQEVGAKP 645 >UniRef50_B2IL96 UvrD/REP helicase n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IL96_BEII9 Length = 730 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 91/467 (19%), Positives = 167/467 (35%), Gaps = 37/467 (7%) Query: 137 SALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEAMLTEYADFFRQVESSP 196 + P ++ + + + + + + + V + Sbjct: 9 APSPCFLSTASLPASSSQFMDGIAMSNEFDHYDPDAYASFMDDRPMYAPSSEAFTVLTQG 68 Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 L P Q A +++VLAGAG+GKTS L +A S +IL + F KAA E Sbjct: 69 LTPRQIEAASAP-GAVVVLAGAGTGKTSTLTCAVVHRIAVEGLSASRILAVTFTNKAASE 127 Query: 257 MDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M +RIR L + TFH L ++ + + E A I + Sbjct: 128 MSDRIRAALQGGSTPSWLGTFHGLGARQLRAEPEVAGLRPNFEILDADDSRRLIKRIMQS 187 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA--- 371 + E + + +R+ +++ ++ L+ A A Sbjct: 188 L------------------NLNTDEQDNESGPEPIKRMINQISKFKDLLLSPDEAPAYVQ 229 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----R 426 + IA A + + A + ++ L+ +N+ DF L+ L + R Sbjct: 230 KKIAEANAIGEPIHPASLFNAARIYALYQQRLRDQNSADFGDLLLWPTRALLRDAAYRTR 289 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + + IL DE+QD++ + L AL ++ + +F VGDD QAIY + GA ++ F Sbjct: 290 WARRFDCILADEYQDVNYAQYQWLRALAFEHHR--IFCVGDDDQAIYGWRGADITYIRRF 347 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL------ 540 ++F + L+ +R I AN I ++P +L K L + + + Sbjct: 348 TQDFPQASVIRLEENFRSTGAILASANAVIARDPHRLGKTLFTNKGYGQPIEVVAYRYCD 407 Query: 541 LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKL 587 + + + K + IL R + E Sbjct: 408 GEAHGIVEEIKKRHAEGVDFAEMAILYRNNFFSRGFEECLVRAKIPY 454 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 22/100 (22%) Query: 580 AATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPD 639 + ++ MT+H SKG + ++V + G ++G + Sbjct: 613 RPNENEEGRLKLMTLHKSKGLEFEHVFLPGWEDGIFP-----------------AGNSDL 655 Query: 640 AEERRLMYVALTRARHRVWALFNKEN-----PSPFVEILK 674 EERRL YVA+TRA+ R + + PS F+ + Sbjct: 656 DEERRLAYVAITRAKRRAAITYCEYRRGLADPSSFIADIP 695 >UniRef50_A1AVZ1 UvrD/REP helicase n=3 Tax=Gammaproteobacteria RepID=A1AVZ1_RUTMC Length = 718 Score = 367 bits (941), Expect = 1e-99, Method: Composition-based stats. Identities = 85/408 (20%), Positives = 160/408 (39%), Gaps = 53/408 (12%) Query: 194 SSPLNPAQARAVVNG-EHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 ++ LN Q ++V E + L+LAGAGSGKT VL R +L+ + + + IL + F K Sbjct: 7 TNDLNDKQCQSVTFNNEKNALILAGAGSGKTRVLTHRIAYLITQKDIRIDAILAVTFTNK 66 Query: 253 AAEEMDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 AA EM ER+ L + + TFH+LA +++ +K + S + A + Sbjct: 67 AATEMRERLSTLLRRPIQSMWMGTFHSLAHRLLRTHYEKSKLTSGFQILDAQDQFRIVKR 126 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 K+ S +++ ++ +++ + Sbjct: 127 LMKENSIDESKFP-----------------------------IKKVQWFINNQKNEDIRA 157 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG----- 425 ++ ++ IK + + ++ + + +DF+ L+ ++ +L+ Sbjct: 158 QDIDPD--------YNYFIKKNLEVFELYEAYCQENDLIDFAELLIRSYELLKNNTDLLN 209 Query: 426 RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 + + ++HILVDEFQD + + + L N +F VGDD Q+IY + GA++ T Sbjct: 210 HYQARFEHILVDEFQDTNTVQYKWIKLLF--NGHNKIFCVGDDDQSIYGWRGAKIENITK 267 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL----- 540 +F E L YR I +N I N ++ K L + + Sbjct: 268 LCTDFTPIETIRLKQNYRSTGNILNASNALITHNVNRMGKSLWTDAGNGELIDVYEARTE 327 Query: 541 -LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKL 587 + + + + + KL IL R++ E Sbjct: 328 TDEANYVISNIQKLITNGASPSDCSILYRFNAQSRIFEEALIKYNIPY 375 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 47/133 (35%), Gaps = 22/133 (16%) Query: 554 SGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEG 613 + + ++ + + + + MTIH++KG + V +VG++E Sbjct: 514 QYNHEQDNKMSEVMGFISLTSLDSSGNTNASINQNVQLMTIHSAKGLEFPCVFLVGMEED 573 Query: 614 SDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN-------- 665 + E EERRL YV +TRA ++ + + Sbjct: 574 LFP------------SRQSKNEPHLTDEERRLCYVGMTRAMKKLSLSYAIKRFLYGQSLY 621 Query: 666 --PSPFVEILKNL 676 PS F+ + + Sbjct: 622 AYPSRFLNEIPSK 634 >UniRef50_C3RQ43 ATP-dependent DNA helicase n=4 Tax=Bacteria RepID=C3RQ43_9MOLU Length = 714 Score = 367 bits (941), Expect = 1e-99, Method: Composition-based stats. Identities = 83/410 (20%), Positives = 150/410 (36%), Gaps = 57/410 (13%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q A + L ++AGAGSGKT V+ R +L+ P +IL + F KAA E Sbjct: 7 LNKNQKEAATYLDSHLRIIAGAGSGKTRVVTYRIAYLIDEIGVDPRKILAITFTNKAANE 66 Query: 257 MDERIRERLHTEDI--TARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M ERI L + T H+L + I+++ + S + I + Sbjct: 67 MKERITSLLGPHALGSLVCTIHSLCVRILRRHINVINYPSNFMIMDEEDQKALIKKIYNN 126 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 + + + + + M Sbjct: 127 LDIDAKTIS-------------------------IKSMIASISNYK------------MA 149 Query: 375 ASAPEEIRDLFSKRIKLM--APLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----F 427 PE +L + + A + K + + +DF L+ +A+ I E + Sbjct: 150 NIDPERAMELAGQFQGEIKKAKVYKEYLEYQENHFMLDFDDLLLKAVYIFENYPDVLEKW 209 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 +++I VDEFQD+ L+ + + VGD Q IY F GA ++ F Sbjct: 210 QHKFQYIHVDEFQDVGNIEYRLVKLMSQDAIT---CVVGDPDQTIYSFRGANVNYILDFD 266 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL------ 541 ++F + LD YR I ++N I++N +L+K L + G + + + Sbjct: 267 KDFKPCKTVILDQNYRSTGNILNISNSLIRKNRNRLEKDLYTEATGGSEVIHYMGKSEQE 326 Query: 542 DESQLDALLDKLSGY--AKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + + + ++K+ IL R +++ + + +I Sbjct: 327 EADYICSQIEKIISEVDGVNYRDFAILYRANYLSRTIEQSMISHGIDYRI 376 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 61/151 (40%), Gaps = 22/151 (14%) Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQAD 603 + L + + I + Y + + + M+IH +KG + D Sbjct: 501 DNIHELQRSIYEFQNQNPDIATIENYLQEISLYTDNDNLDDGQY-VSLMSIHMAKGLEFD 559 Query: 604 YVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNK 663 YV ++GL EG A ES D EERRL YVA TRAR +++ ++ Sbjct: 560 YVFVLGLSEGIFPSFRALSES-----------DEGLEEERRLAYVAFTRARKQLFLTDSE 608 Query: 664 ------ENP---SPFVEILKNLDVP-VARKP 684 ++P S F++ + + + V KP Sbjct: 609 GFSFVTDSPKISSRFIDEIGSEGIKHVGTKP 639 >UniRef50_B7C8B0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8B0_9FIRM Length = 725 Score = 367 bits (941), Expect = 1e-99, Method: Composition-based stats. Identities = 79/411 (19%), Positives = 152/411 (36%), Gaps = 51/411 (12%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 LN Q A + ++AGAGSGKT VL+AR +L+ P +IL + F Sbjct: 2 SNSILDTLNENQRTAATTINEHVRIIAGAGSGKTRVLMARIVYLVQDCGILPNRILAITF 61 Query: 250 GRKAAEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 KAA EM R+ +L T + T H+L + ++++ + + + Sbjct: 62 TNKAANEMKTRLTAQLGSMTSVVRISTIHSLCVRMLREDADLIGYPKTFAIMDPEDQKAI 121 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 + K K + +++ ++ Sbjct: 122 LKPIYKTLEVDKTTIS---------------------YNRALGAISAYKTNYIDPQMAAN 160 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE---- 423 A ++ + +A + ++ A+DF L+ + +L Sbjct: 161 MAMDDVSIT---------------LAKIYAGYEARRNEMKAMDFDDLLLEGHRLLNSVSS 205 Query: 424 -KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 K ++ + +I VDEFQD+ P + ++ L +N+ L VGD Q IY + GA + + Sbjct: 206 VKEKWQNRLDYIHVDEFQDVDPIQYGIIKLLTGKNTH--LCVVGDPDQTIYTWRGASVDI 263 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL-- 540 F+++F + L+ YR I + +N I+ N ++ K L + GD+K Sbjct: 264 ILKFNKDFEPCKTVILNENYRSTQPILDASNAVIKYNKERIDKDLYTKLPGDEKITMFEG 323 Query: 541 ----LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKL 587 + + +++ + + IL R ++ A + Sbjct: 324 KEDSEEPIFVARQINEKHKKGLEYKDMAILYRSNYSSRAFERIFKSVGIPY 374 Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 54/140 (38%), Gaps = 21/140 (15%) Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQAD 603 L L + ++ + + + + A + + MT+HA+KG + D Sbjct: 511 DNLKELKEDIAQSMIEDPEMTL--ESYLQDIALFTDKTQETSENTVSLMTVHAAKGLEFD 568 Query: 604 YVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNK 663 V +V +G FP++ EERRL+YVA+TRA+ ++ +N Sbjct: 569 TVFLVNFNDGV--FPSSRACD--------EGGMKALEEERRLLYVAMTRAKKTLYITWNT 618 Query: 664 ---------ENPSPFVEILK 674 + PS F + Sbjct: 619 GFSYMQDAFKTPSRFRAEIP 638 >UniRef50_A7KV33 PcrA helicase n=1 Tax=Bacillus phage 0305phi8-36 RepID=A7KV33_9CAUD Length = 657 Score = 366 bits (940), Expect = 1e-99, Method: Composition-based stats. Identities = 94/413 (22%), Positives = 161/413 (38%), Gaps = 56/413 (13%) Query: 193 ESSPLNPAQARAV-VNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 LNPAQ AV ++ LV+AGAGSGKT VL R G++L G P +IL + F Sbjct: 18 LLDGLNPAQKEAVVKTVKNPSLVIAGAGSGKTRVLQKRVGYILENG-IDPRRILTVTFTN 76 Query: 252 KAAEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFI 308 KAA EM ERI + + I TFH+LA+ + Q + + + I Sbjct: 77 KAATEMKERIGNEVGEARAKKIMIGTFHSLAVRWLHQYYSEAGLKKNWTIFDSEDTNKVI 136 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 E K N D ++ SR+ + M + Sbjct: 137 KELLK-------------------------SNNMDDSKQNVYATQSRISNLKNDMILPKD 171 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE----- 423 + +M A + + ++ + NAVDF LI + +++LE Sbjct: 172 FRKQMEPQDKS------------FARIYERYQDRMARNNAVDFDDLIMKMVILLESNTEV 219 Query: 424 KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 + +F +K+I+ DE+QD + + ++ + + +F VGDD+Q IY + GA + Sbjct: 220 RRKFQRRYKYIMCDEYQDTNECQYRMIKNIV--GDKNNIFVVGDDYQGIYGWRGANIEKI 277 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL--- 540 F +++ + L+ YR + I N ++ N Q+ K + +K Sbjct: 278 LNFQKDYPGTKVVKLEQNYRSTNTIVTAGNAIMKHNTKQMNKTCFTDKGMGEKIRKYEAP 337 Query: 541 LDESQLDALLDKLSGY----AKPEERILILARYHHMRPASLEKAATRWPKLQI 589 DE + + ++ E I +L R + ++ + Sbjct: 338 DDEQEARFIAQEIQNLCTFDGYKYEDIALLYRTNVQSRLLEDQFIRHNIPYNM 390 Score = 118 bits (297), Expect = 6e-25, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 66/186 (35%), Gaps = 31/186 (16%) Query: 504 FNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERI 563 + I ++ I + ++K + D + + + E A + + Sbjct: 489 SDQPITDM-LELIFKYTQYIEKLQETGKEEDFRRIDNIKELTKIAKGYEQENKDPHLQDF 547 Query: 564 LILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARE 623 L + A + + ++ MT+H SKG + V ++G++EG + Sbjct: 548 L-------DQIALQSQQDKVVNQDKVQLMTLHTSKGLEYPVVFMIGMEEGLFPHSRSLS- 599 Query: 624 SIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN-----------PSPFVEI 672 + EERRL YV +TRA+ ++ + PS F+E Sbjct: 600 -----------DTVQLEEERRLAYVGITRAQEILYFTHAERRMDYNRTYNWQTPSRFMEE 648 Query: 673 LKNLDV 678 L + + Sbjct: 649 LPDELI 654 >UniRef50_C8PTM7 ATP-dependent DNA helicase PcrA n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PTM7_9SPIO Length = 809 Score = 366 bits (940), Expect = 1e-99, Method: Composition-based stats. Identities = 98/405 (24%), Positives = 152/405 (37%), Gaps = 56/405 (13%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q AV + LL+LAGAGSGKT V+ + WL+A PE IL + F KAA E Sbjct: 11 LNPEQLEAVCHTGSPLLILAGAGSGKTRVITTKIAWLIAEQGVRPESILAVTFTNKAARE 70 Query: 257 MDERIRER-LHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQC 315 M ER R T RTFH+ ++++ ++ + + + Q Sbjct: 71 MAERARVLDERTARSVIRTFHSFGAWMLRRYAEWAGLSPNFTIYDDEDSVTLLMKALPQL 130 Query: 316 SEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIA 375 ++++AQ ++ R + Q MI Sbjct: 131 NKQEAQG-----------------------------FMRKISRAKDYCLLPDSPQLVMIE 161 Query: 376 SAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RFISP 430 APE A + + ++ L+ DF LI + +L++ + + Sbjct: 162 PAPE------------FATIYRTYQQRLRETGNADFGDLIMLPVRLLQEHSAIARQLHNR 209 Query: 431 WKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENF 490 +K ILVDE+QD + + LL L + T + VGDD Q+IYRF GA++ F F Sbjct: 210 FKVILVDEYQDSNDAQFRLLRELTGE--DTYVCVVGDDDQSIYRFRGAEVQNILTFDRQF 267 Query: 491 GEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL-------DE 543 + L YR I VA + +N G+L K L + + L + Sbjct: 268 PHTKIIRLVRNYRSYEPILRVAGSIVSRNEGRLGKTLIAERGTSGQKPHLYYLPSQDAEA 327 Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 L+ K IL R + + + Sbjct: 328 ELCVQLVKKAVRAGGSYSDWAILYRTNAQSLSFETAFLHEKIPHK 372 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 45/136 (33%), Gaps = 24/136 (17%) Query: 559 PEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFP 618 L + A T + +TIH +KG + VII GL+ G Sbjct: 620 YPCSAAGLTSFLEHIELDRSLAETDAGADAVQLITIHNTKGLEFRNVIITGLENGIFP-- 677 Query: 619 AAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSP 668 EERRLMYVA TRA+ ++ PS Sbjct: 678 ------------RNDTIGEDMEEERRLMYVACTRAKDALYMTSCAARRMYGKLSFMEPSR 725 Query: 669 FVEILKNLDVPVARKP 684 F+ + V VA +P Sbjct: 726 FLAEIDGDLVDVAGQP 741 >UniRef50_B2RKD8 ATP-dependent DNA helicase n=5 Tax=Bacteroidetes RepID=B2RKD8_PORG3 Length = 765 Score = 366 bits (939), Expect = 2e-99, Method: Composition-based stats. Identities = 90/410 (21%), Positives = 157/410 (38%), Gaps = 47/410 (11%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 S LN +Q AV+ + LV+AGAGSGKT VLV + L+ G P +++ L F KA Sbjct: 6 LSSLNDSQKAAVLYNDGPALVIAGAGSGKTRVLVYKLLHLIRSG-YDPARLMALTFTNKA 64 Query: 254 AEEMDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 A+EM ER+ + I TFH++ I+++ + + + + Sbjct: 65 AKEMKERVASEIGPTAYRIQMGTFHSVFSRILRENAIHLGYTRDFSIYDTNDTKSLLRHV 124 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 K+ + D + R+ + + Sbjct: 125 MKRMNID-------------------------DKVYRLNAVQHRISMAKNQLISP----- 154 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR----- 426 E A+ + R R+ MA + + K NA+DF L+ + V+ Sbjct: 155 ESYAANKDLSRYDIDCRMPRMAEIYSLYTILCKQNNAMDFDDLLFKINVLFRDFPDVLQT 214 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + ++L+DE+QD + + + L + + +F VGDD Q+IY F GA++ F Sbjct: 215 YRDRIDYLLIDEYQDTNFAQYLIARQLMGEKGK--VFVVGDDAQSIYSFRGAKVENILGF 272 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAV-------T 539 ++F + L+ YR I AN I N G++ K + S ++ Sbjct: 273 SKSFPGSKLFKLEENYRSTQSIVNAANSLIAYNEGRIPKQVFSNKQVGERIRLTGCLSGY 332 Query: 540 LLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 L + D+++++ P IL R + E +I Sbjct: 333 LEAYTVADSIVERRMQEYCPYSDFAILYRTNAQSRVFEEALRKHNIPFRI 382 Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 24/108 (22%) Query: 587 LQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLM 646 + MT+HA+KG + ++ IVG++E + + EERRL Sbjct: 560 DYVTLMTVHAAKGLEFKHIFIVGMEENLFP-------------SMMNATEQGLEEERRLF 606 Query: 647 YVALTRARHRVWALFN----------KENPSPFVEILKNLDVPVARKP 684 YVA+TRA+ F + PS F++ L + V R P Sbjct: 607 YVAITRAKESCHISFAAERSRNGRTERSRPSRFLQELDDAYVE-RRVP 653 >UniRef50_A5IY88 ATP dependent helicase n=2 Tax=Mycoplasma RepID=A5IY88_MYCAP Length = 734 Score = 365 bits (938), Expect = 2e-99, Method: Composition-based stats. Identities = 87/409 (21%), Positives = 160/409 (39%), Gaps = 45/409 (11%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN + A+ + L ++AGAGSGKT VL + +L+ SP+ IL + F KAA Sbjct: 17 SLNEEETEALYYFDGPLRIIAGAGSGKTRVLTRKIAYLINVLGISPDHILAVTFTNKAAS 76 Query: 256 EMDERIRERLHTE----DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 EM ER+++ +T+ TFH+L I+++ + + + + + + + + Sbjct: 77 EMSERVKQYTNTKFNKGTAEISTFHSLCARILREEAFHINLKNDFQIIDDNDKKKILKDI 136 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 K+ + + + L + + Sbjct: 137 YKE-------------------------HDLVPTDSNFKNLTRFFSWLKNKLYASDEEII 171 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR----- 426 + I S PE F + + + + LK ++DF L+ + + K Sbjct: 172 DFINSDPE---SEFYGDGETVVKIYNFYNEQLKHLQSLDFDDLLIKVNELFYKNPEIVKK 228 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + + +ILVDEFQD S + ++ L Q +Q L VGD Q IYR+ GA ++L +F Sbjct: 229 WALKYSYILVDEFQDTSAIQYEIIKYLSSQKAQ--LTIVGDPDQTIYRWRGADVNLILSF 286 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL----- 541 ++F + L+ YR +I AN I+ N + K L + + + + Sbjct: 287 EKDFENTKTIILNKNYRSTKKILAAANNLIKYNRNRFNKNLVTDNSDGDEIEYIHAFSPE 346 Query: 542 -DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + + ++ L + I I R + E+ +I Sbjct: 347 AEVRWVVQKINDLKKQKIQLKNIAIFYRSNSYSRNFEEQLMNEKINYKI 395 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 21/123 (17%) Query: 566 LARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESI 625 L Y ++ + MT+HA+KG + D V +VG+ E FP + Sbjct: 546 LKEYFEYISLISASDSSNESMSYVSLMTVHAAKGLEFDNVFLVGMCENI--FPNYRAYKV 603 Query: 626 MEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNK---------ENPSPFVEILKNL 676 E EERRL YVA+TRA+ +++ ++ + PS F++ + Sbjct: 604 AE----------AMEEERRLAYVAITRAKEKLFVSDSRGLLLYSQTEKKPSRFLKEMGID 653 Query: 677 DVP 679 Sbjct: 654 INK 656 >UniRef50_Q0EW02 DNA helicase II n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EW02_9PROT Length = 699 Score = 365 bits (937), Expect = 3e-99, Method: Composition-based stats. Identities = 90/408 (22%), Positives = 155/408 (37%), Gaps = 53/408 (12%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + LNPAQ AV G+ L+LAGAGSGKT ++ R G L++ +P +IL + F KAA Sbjct: 2 ADLNPAQLAAVEAGDGPQLILAGAGSGKTRTIIHRIGHLISARGVAPHRILAVTFTNKAA 61 Query: 255 EEMDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 E+ R+ E + + + TFHA++L ++++ ++ + + A + + Sbjct: 62 AELKSRLSELIGDDGGGVVSGTFHAISLRLLRRYAEALAYPRSFQVIDADDQKALVKRIL 121 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 KQ + R S L W+ + G + Sbjct: 122 KQANIPAD-----------------------------RLHPSFLLGWIEHCKHAGQTAEQ 152 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RF 427 A + L ++ L+ +DFS LI ++++ + Sbjct: 153 APAC---------DWNGVDLRGLYSTYQQQLREHERMDFSDLILNCVLLMREHADIAEAL 203 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + HILVDE+QD +P + L L + L VGDD Q+IY + GA + F Sbjct: 204 QRRFDHILVDEYQDTNPVQHEWLTLLCAGHR--NLTVVGDDDQSIYGWRGADIRHILEFE 261 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSL------TNGDKKAVTLL 541 + L+ YR I ++AN I +N + K L + Sbjct: 262 RIWSGAGTHRLEENYRSTGAILDLANAVISKNEDRHDKSLRATQEQGLLPQWQVCNDEYD 321 Query: 542 DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + Q+ L + + +L R + A + + +I Sbjct: 322 EARQIGTQLQAWRDAGYAWQEMAVLYRSNRQSLALEQILREQGLPYRI 369 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 25/121 (20%) Query: 577 LEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVED 636 E + + M++H +KG + D V++ G++EG A + + Sbjct: 530 EEAGRDDENEESVTLMSLHRAKGLEFDCVVLPGVEEGLLPHQRALDDG-----------E 578 Query: 637 FPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILK----NLDVPVAR 682 AEERRL+YV +TRAR + + PS F++ L D PVA Sbjct: 579 AGIAEERRLLYVGITRARRHLKLTTARVRRLFGETHYPLPSRFIKNLPPSMLQQDTPVAT 638 Query: 683 K 683 Sbjct: 639 A 639 >UniRef50_Q6MAS4 Probable ATP-dependent DNA helicase, mutU n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MAS4_PARUW Length = 668 Score = 365 bits (936), Expect = 4e-99, Method: Composition-based stats. Identities = 88/410 (21%), Positives = 152/410 (37%), Gaps = 53/410 (12%) Query: 191 QVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFG 250 + E LNP Q AV +L+LAGAGSGKT VL R +L+ SP IL L F Sbjct: 2 EKELETLNPEQKHAVKLINGRVLILAGAGSGKTRVLTMRMAYLIRYLNVSPRAILGLTFT 61 Query: 251 RKAAEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 KAA EM R+ + + +T TFH + I++Q K+ +K + Sbjct: 62 NKAAAEMRHRLANFVDSKLAKQVTLCTFHGFCMQILRQDIAKLGYTTKFSLYDEQDVQRL 121 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 I + + + + L + + + Sbjct: 122 INMIVRDILQHEGELPSLTSTL------------------------NAIRHAKNKGISPE 157 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR- 426 + + + + + +++A NAVDF L+ + +LE+ Sbjct: 158 NIE-----------ISESKWHNSFVQDVYRRLQASMRAYNAVDFDHLLSLTVELLERFPD 206 Query: 427 ----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + ++++++DE+QD +P + L + L + L VGDD Q+IY + GA + Sbjct: 207 VLEAYQERFRYMMIDEYQDTNPIQYRLASLLTSKY--QNLCVVGDDDQSIYGWRGADVKN 264 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD 542 F + L+ YR + I + AN I N + KK L S Sbjct: 265 ILEFEK----ATVIKLEQNYRSTNFILKAANAVIDHNQYRHKKKLWSEKGEGHPIEVFHT 320 Query: 543 ESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFM 592 ++L+ + K +E + A L ++ + + M Sbjct: 321 PNELEEAQVVVKRIVKMKESL----NLQWKDFAILYRSNALSRQFETALM 366 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 51/144 (35%), Gaps = 23/144 (15%) Query: 546 LDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYV 605 L + E + ++ + + ++ +T H++KG + Sbjct: 532 LAEFEQQAQLNPDLESSLENFLGNMYVDNKFNQSTKNNRHEDRVSLLTFHSAKGLEFPVC 591 Query: 606 IIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKE- 664 +VG+++ + +E+ EERRLMYVA+TRA+ + ++ Sbjct: 592 FLVGMEDHIIPHEKSMKET-------------GIEEERRLMYVAITRAQQHLTISMAQQR 638 Query: 665 ---------NPSPFVEILKNLDVP 679 PS F+ + + Sbjct: 639 KRMGKDMASRPSRFLFEIPKELLK 662 >UniRef50_A6GG96 UvrD/REP helicase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GG96_9DELT Length = 693 Score = 364 bits (935), Expect = 5e-99, Method: Composition-based stats. Identities = 96/413 (23%), Positives = 168/413 (40%), Gaps = 49/413 (11%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 ++ S LNPAQ AV++ E LLVLAGAGSGKT V+ R L+ G PE+I+ L+F Sbjct: 1 MDLSSLNPAQREAVLHTEGPLLVLAGAGSGKTRVITHRIARLMELGT-QPEEIVALSFTN 59 Query: 252 KAAEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFI 308 KAAEEM ER+ + + + + TFH+L ++++ K + + + + Sbjct: 60 KAAEEMRERLAKMVGRAKAKALVLGTFHSLGARMMREDPKGFEVPPRFQILDQGDVNGIV 119 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 ++ AK + R+ W + Sbjct: 120 RALLREYGFHGGSAK---------------------KRWDINAIVQRISLWKN------- 151 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-- 426 + +++A + + + ++ A L +A+ L+A AVDF L+ + ++L+ Sbjct: 152 ---DFLSAAEVKRKVSSNDYDEIAAELYEAYDDRLRALAAVDFDDLVCRIALMLQDNPLT 208 Query: 427 ---FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 + ++++LVDE+QD + + +L L + L VGDD QAIY + GA+++ Sbjct: 209 KKRWRRRFRYLLVDEYQDTNTAQFQMLLELLGE--DQNLCVVGDDDQAIYGWRGAKVANI 266 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL--- 540 F F + L+ YR I AN I N + K L G +K + Sbjct: 267 LGFDLYFRNAKVIKLEANYRSRPPITTCANAVIAHNTSRHDKELVPQRTGGEKVQLVVTR 326 Query: 541 ----LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + D + + + +L R A + ++ Sbjct: 327 DGPSEAKWVADKIYQLIHERGARPKHCAVLYRSSRQARAVEQNLQEHGLPFRM 379 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 31/107 (28%), Positives = 42/107 (39%), Gaps = 16/107 (14%) Query: 586 KLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRL 645 I T H+SKG + V I+G++EG+ + L EERRL Sbjct: 556 PDAITLSTFHSSKGLEWSQVFIIGVEEGTLPHKRT------DAPRLSDAIAGDLEEERRL 609 Query: 646 MYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVAR 682 YV +TRAR R+W PS F++ L D V Sbjct: 610 FYVGITRARDRLWMTRAATRVDRGRELEIKPSRFLDELPEPDSGVIE 656 >UniRef50_Q0SMP9 Rep helicase, single-stranded DNA-dependent ATPase n=19 Tax=Borrelia burgdorferi group RepID=Q0SMP9_BORAP Length = 659 Score = 364 bits (934), Expect = 8e-99, Method: Composition-based stats. Identities = 93/423 (21%), Positives = 165/423 (39%), Gaps = 67/423 (15%) Query: 185 YADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQI 244 DFF+ LN Q AV E +LL++AGAGSGKT V+ R +LL +G A ++I Sbjct: 2 PDDFFK----KSLNQFQYEAVTTIEGALLIIAGAGSGKTRVVTHRIAYLLLKGIAQ-KEI 56 Query: 245 LLLAFGRKAAEEMDERIRERL--HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAA 302 L L F KAA EM +RI++ L ++ TFHA L +++ K + Sbjct: 57 LALTFTNKAANEMKDRIKKILKSPLSNLMVSTFHAFGLFFLKENYKLLGYRKNFSIYDDN 116 Query: 303 RHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSL 362 + E + + L++ + + + Sbjct: 117 DRISLLKEILLD-------------------------EGLLNKKVSLNSLSNVISLFKNG 151 Query: 363 MRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVIL 422 + + E I + + ++ L+ N+ DF LI + +L Sbjct: 152 ILTLNDLKEEDIN-------------------IFRLYEERLRLYNSFDFDDLILKPKELL 192 Query: 423 E-----KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSG 477 + ++ +K++L+DEFQD S + + L + + L VGDD Q+IY + G Sbjct: 193 SNNSDIRNKYSKRYKYVLIDEFQDTSLIQYNFIRLLI---NHSNLCCVGDDDQSIYSWRG 249 Query: 478 AQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKA 537 A + F +++ + L+ YR I +VAN I N + +K L S K Sbjct: 250 ASYNNMLQFEKDY-NAKEIKLEQNYRSAKNILDVANSVILNNKNRKEKTLWSSKMCSKVI 308 Query: 538 VTLLDESQLD-------ALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQID 590 + E ++ +++ ++I +L R + + + K ++ Sbjct: 309 DFFIFEDEIQESEFVASQIIELSKLEGFQSKKIGVLMRTNALFKNVEMIFKRQGIKYKVS 368 Query: 591 FMT 593 T Sbjct: 369 GGT 371 Score = 98.9 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 57/160 (35%), Gaps = 21/160 (13%) Query: 527 LNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPK 586 L S K ++ L + +K + L+ + + + + Sbjct: 495 LVSENPNSIKVAEYKYQNIEGFLSIIKNWESKQLGELRDLSSFLNYIVLQSNEVSEESEN 554 Query: 587 LQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLM 646 + I+ MT+H++KG + DYV + +++ +S ++ RR+ Sbjct: 555 ININLMTVHSAKGLEFDYVFFIAVEDNIIPHHRIIEDSELDLEEE-----------RRVF 603 Query: 647 YVALTRARHRVWALFNKEN----------PSPFVEILKNL 676 YVALTRA+ + + PS F+ + Sbjct: 604 YVALTRAKDSLVITMANKRKKDRQIFEQLPSRFISEIPKE 643 >UniRef50_D1R4U3 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4U3_9CHLA Length = 677 Score = 363 bits (933), Expect = 9e-99, Method: Composition-based stats. Identities = 95/420 (22%), Positives = 162/420 (38%), Gaps = 58/420 (13%) Query: 186 ADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQIL 245 DF ++++ LNP+Q AV + +L+LAGAGSGKT VL R +L++ ASP+ IL Sbjct: 3 NDFKEELDA--LNPSQRAAVTTTDGRVLILAGAGSGKTKVLTVRMAYLMSIKGASPKSIL 60 Query: 246 LLAFGRKAAEEMDERIRERLHT---EDITARTFHALALHIIQQGSKKVPIVSKLENDTAA 302 L F KAA EM RI + I+ TFH+ + I++ K+ + Sbjct: 61 GLTFTNKAAAEMRHRIGAFAAPHIAKQISLCTFHSFCMQILRAEIHKLGYTPQFSLYDEK 120 Query: 303 RHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSL 362 + I + E +A+ ++ Sbjct: 121 DVQRLIGLIARDVLEHEAELPSLASTTA----------------------------VINQ 152 Query: 363 MRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVIL 422 + G A E+ + E + + + + +L+A NAVDF+ L+ + + Sbjct: 153 AQNKGLASEEICDTGSE-------WHDEFARTIYQRLQASLRAYNAVDFNNLLGLTVQLF 205 Query: 423 EK-----GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSG 477 E ++ +++I++DE+QD +P + L + L ++ L VGDD Q+IY + G Sbjct: 206 ENFPDVLEKYQERYRYIMIDEYQDTNPVQYKLASLLSRKY--QNLCVVGDDDQSIYGWRG 263 Query: 478 AQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKA 537 A++ F + L+ YR + I + AN I N + +K L S Sbjct: 264 AEVKNILDFS----DATTIKLEQNYRSTNNILKAANGVISHNQTRYQKVLWSNRGEGDLI 319 Query: 538 VTLL-------DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQID 590 E+ + + Y I IL R + + K Sbjct: 320 EVFHAPSDKEEAEAVVYRIAHMREKYQLKWRDIAILYRSNALSRLFELALMNYAWKDGDQ 379 Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 66/211 (31%), Gaps = 40/211 (18%) Query: 484 TAFHENFGEGERCDLD-TTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD 542 F ++F ++ Y+ + N ++ + K Sbjct: 490 QRFEQDFSYALTELIEAVNYK------KAINDEVKSAQMRDFK----------WENVQEF 533 Query: 543 ESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQA 602 S L + + ++ + K Q++ MT H+SKG + Sbjct: 534 VSSLVEFNESFLKEFNKTPTLHDFITSTPLQQDWNQSQKNTQQKDQVNLMTFHSSKGLEF 593 Query: 603 DYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFN 662 +VG+++ + +E EERRLMYV +TRAR + Sbjct: 594 KACFLVGIEDHIIPHEKSLKE-------------VGVEEERRLMYVGITRARQFLTISMA 640 Query: 663 KEN----------PSPFVEILKNLDVPVARK 683 ++ PS F+ + + + + Sbjct: 641 RKRKRMGKEYASKPSRFLHEIPKELLNITKW 671 >UniRef50_C0R2D4 ATP-dependent DNA helicase n=4 Tax=Brachyspira RepID=C0R2D4_BRAHW Length = 659 Score = 363 bits (933), Expect = 1e-98, Method: Composition-based stats. Identities = 93/406 (22%), Positives = 160/406 (39%), Gaps = 59/406 (14%) Query: 198 NPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEM 257 + Q +++ LL+LAGAGSGKT V+ + +L+ E +PE I+ + F KAA EM Sbjct: 8 SEVQREGILHTGSPLLLLAGAGSGKTLVITRKIAYLINELEVAPENIMAVTFTNKAAHEM 67 Query: 258 DERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 ER+ L + RTFH+ L I+++ + + S I K+ Sbjct: 68 KERVCSLLPDIKPSRLFIRTFHSACLRILKENAHFLGYKSNFLILDEGDKASVIKRIMKE 127 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 K+ + + R++S ++ Sbjct: 128 EEVPKSIGQKI------------------------------ITRFISNVKN--------- 148 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRFIS 429 + D + + K + EN +DF LI I + E+ + + Sbjct: 149 -----GMDDGIVFDRDIFENVYKKYTEYEFNENVMDFDDLILNTIKLFEQENKVLNYYRN 203 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 +K+ILVDEFQD +PQ+ L+ L + ++ L VGDD Q+IY F GA + F ++ Sbjct: 204 RFKYILVDEFQDTNPQQYKLIKLLTQD-AENDLTVVGDDDQSIYAFRGADVLNILDFEKD 262 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDA- 548 + + L+ YR I E A I+ N + +K + S + K + S L+ Sbjct: 263 YPNTKIVRLEENYRCPKDIVEAALSVIKNNSNRHEKNVFSNKPNEFKIENWICYSDLEEA 322 Query: 549 -----LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 ++ L I++L R + A ++ +I Sbjct: 323 RSVVNEIESLFDNGFEARDIVVLFRTNSQSRAYEKELRLHSINYKI 368 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 57/151 (37%), Gaps = 25/151 (16%) Query: 546 LDALLDKLSGYAKPEERI---LILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQA 602 + + +L + + L + + + + MTIH +KG + Sbjct: 503 AEENIKELFRGFYDYKSMEANATLITFLEENTLYRDLNTNDEKEDYVTLMTIHNAKGLEF 562 Query: 603 DYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFN 662 D V + G+++G + E+ EERRL YV +TRAR +++ ++ Sbjct: 563 DVVFMTGMEQGVFPHYFSLE------------EEKGIDEERRLCYVGITRARRKLYLTYS 610 Query: 663 KEN----------PSPFVEILKNLDVPVARK 683 K+ PS F+ + + + K Sbjct: 611 KKRRVSTGIMEQIPSSFLLEIPKKLMLIKEK 641 >UniRef50_P44804 ATP-dependent DNA helicase rep n=275 Tax=Proteobacteria RepID=REP_HAEIN Length = 670 Score = 363 bits (932), Expect = 1e-98, Method: Composition-based stats. Identities = 91/413 (22%), Positives = 155/413 (37%), Gaps = 54/413 (13%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNP Q +AV LVLAGAGSGKT V++ + L+ + SP+QI + F KAA Sbjct: 2 KLNPQQQQAVEYVTGPCLVLAGAGSGKTRVIINKIAHLIEKCGYSPKQIAAVTFTNKAAR 61 Query: 256 EMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM ER+ + ++ + TFH L I+++ K + S + + E Sbjct: 62 EMKERVAHSIGKEQSKGLLVSTFHTLGFDILKREYKALGFKSNMTLFDEHDQFALLKELT 121 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 +D+ L R L S + W + + A A Sbjct: 122 ADV--------------------------LKEDKDLLRELISVISNWKNDLISPKQAFA- 154 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RF 427 + + A + + ++ NA+DF LI ++ ++ ++ Sbjct: 155 ----------LARDAKYQTFAKCYERYATQIRTYNALDFDDLIMLPTLLFKQNEEVRSKW 204 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + +++LVDE+QD + + L+ L + VGDD Q+IY + GA+ Sbjct: 205 QAKIRYLLVDEYQDTNTSQYELIKLLV--GDRACFTVVGDDDQSIYSWRGARPENMVRLR 262 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLD 547 ++F L+ YR RI AN I N K L S +K + + +++ Sbjct: 263 DDFPRLNVIKLEQNYRSTQRILHCANILIDNNEHVFDKKLFSTIGKGEKLLVIEAKNEEH 322 Query: 548 ALLDKLSGYAKP-------EERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 ++ + IL R +H + +I T Sbjct: 323 EAERIVAELIAHRFSRKTKYKDYAILYRGNHQSRLLEKVLMQNRIPYKISGGT 375 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 41/147 (27%), Positives = 57/147 (38%), Gaps = 23/147 (15%) Query: 546 LDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYV 605 D + D L G E L LE+ Q+ MT+HASKG + YV Sbjct: 510 FDWVADMLKGDETNEPMNLNQVVTRLTLRDMLERGEDDDDSDQVQLMTLHASKGLEFPYV 569 Query: 606 IIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN 665 ++G++EG + E + EERRL YV +TRA+ + +E Sbjct: 570 YLIGMEEGILPHQTSIDEDNV-------------EEERRLAYVGITRAQKELTFSLCRER 616 Query: 666 ----------PSPFVEILKNLDVPVAR 682 PS F+ L N DV R Sbjct: 617 RQYGELVRPEPSRFLAELPNDDVLWER 643 >UniRef50_C3JBX6 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria RepID=C3JBX6_9PORP Length = 809 Score = 361 bits (928), Expect = 3e-98, Method: Composition-based stats. Identities = 90/412 (21%), Positives = 156/412 (37%), Gaps = 49/412 (11%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 LNPAQA AV+ + LV+AGAGSGKT VL + LL G P +++ L F KA Sbjct: 5 EKELNPAQAEAVLYDDGPALVIAGAGSGKTRVLTYKLAHLLEEG-YDPHKLMALTFTNKA 63 Query: 254 AEEMDERIRERLHTED---ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 A EM R+ + + D + TFH++ ++ + + + + + Sbjct: 64 AREMLSRVESMVGSRDTFRMKLGTFHSVFSRYLRIYAPLLGFTPNFSIYDTSDSKSLVKR 123 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 K + + + R+ + + Sbjct: 124 IVKDMALDPKF-------------------------YTPKLVLGRISHCKNNLITP---- 154 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR---- 426 E A+ E + + + ++ + A+ + NA+DF L++ ++L Sbjct: 155 -EGYAAGGEYAEYDYRRGVPMLHSVYAAYVAQCRQANAMDFDDLLYYFNILLRDHPEVQA 213 Query: 427 -FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 + ++L+DE+QD +P + + L + + +FAVGDD Q+IY F GA M Sbjct: 214 ECAASVDYLLIDEYQDTNPSQYLIARRLVEA--KQRIFAVGDDAQSIYSFRGASMQNILT 271 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQ 545 F F L+ YR + RI +AN I+ N ++KK + S +K ES Sbjct: 272 FTHTFPSARLFKLEENYRSSQRIVALANSLIEHNVHRIKKDVFSNRAKGEKIDLYEMESG 331 Query: 546 LDALLDKLSGYAKPEER--------ILILARYHHMRPASLEKAATRWPKLQI 589 + K + IL R + ++ +I Sbjct: 332 YREAQHVVESIYKRYCKHSETSYGSFAILYRTNAQSRLFEDQLRQAGIPYRI 383 Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 31/100 (31%), Positives = 42/100 (42%), Gaps = 23/100 (23%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 + MTIHA+KG + D+V IVGL+EG FP+ RR Sbjct: 569 NADAVHLMTIHAAKGLEFDHVYIVGLEEGL--FPSMLSAEEENIEEE-----------RR 615 Query: 645 LMYVALTRARHRVWALFNKEN----------PSPFVEILK 674 L+YVA+TRA+ F + PS F+ L Sbjct: 616 LLYVAITRAKEYCSISFARYRAINGMTEYMIPSRFLRDLD 655 >UniRef50_C9M511 ATP-dependent DNA helicase PcrA n=2 Tax=Synergistaceae RepID=C9M511_9BACT Length = 673 Score = 361 bits (928), Expect = 4e-98, Method: Composition-based stats. Identities = 91/415 (21%), Positives = 147/415 (35%), Gaps = 57/415 (13%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 LN AQ AVV L+LAGAGSGKT VL + WL+ P +IL + F Sbjct: 21 ESAWLKGLNDAQKEAVVYLGKRQLILAGAGSGKTRVLTRKIAWLIDAQRVKPWRILAVTF 80 Query: 250 GRKAAEEMDERIRERLHTE--DITARTFHALALHII---QQGSKKVPIVSKLENDTAARH 304 KAA EM +R+ L + RTFH+ L ++ + +++ + A Sbjct: 81 TNKAAREMLDRLTASLGENLAGLQVRTFHSFGLQMLFRSRAQLEQLGYPPQCVVYDRADS 140 Query: 305 ELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMR 364 + + ++ + + + + Sbjct: 141 LSAAKAVLEALNLDP-------------------------EQYTPAWVLETISKAKNSGA 175 Query: 365 MHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK 424 G + S ++ PL + + G LK+ A DF LI + +L + Sbjct: 176 GLGAFDNSPMKS--------------IVGPLYERYDGLLKSRGAWDFDDLIALPLELLTR 221 Query: 425 -----GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQ 479 R +LVDE+QD++ + L+ L L AVGD Q+IY + GA Sbjct: 222 FPEVKEREQKALDWVLVDEYQDVNAAQYRLMRLLASGG--ANLTAVGDPDQSIYGWRGAD 279 Query: 480 MSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVT 539 MS+ F +F L+ YR I E AN I N + +K L + K Sbjct: 280 MSMIMNFERDFPGASVMLLEQNYRSTGGILEAANSLISHNFDRREKNLWTDREQGAKPQV 339 Query: 540 LL------DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 + + +++ + IL R + + E + Q Sbjct: 340 WNCPTSDDEAELITTEIERFLSSGYRASDVAILYRMNALSRRIEESLLSHNLPYQ 394 Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 39/101 (38%), Gaps = 22/101 (21%) Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 I+ T+H +KG + V ++GL+EG + + EERRL YV Sbjct: 563 INLSTLHGAKGLEFPLVFMIGLEEGIFPHSRS------------SDDPAEIEEERRLCYV 610 Query: 649 ALTRARHRVWAL----------FNKENPSPFVEILKNLDVP 679 +TRA+ R+ + PS F+ + Sbjct: 611 GMTRAQERLILTRVRERRLFGSTTTQRPSRFLAEIAPDLRD 651 >UniRef50_Q2STJ5 ATP-dependent DNA helicase Rep n=90 Tax=Bacteria RepID=Q2STJ5_BURTA Length = 848 Score = 361 bits (927), Expect = 4e-98, Method: Composition-based stats. Identities = 98/425 (23%), Positives = 153/425 (36%), Gaps = 69/425 (16%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 + S+ LNPAQ+ AV + LVLAGAGSGKT V+ + L+ P I + F Sbjct: 151 SAIMSAGLNPAQSEAVRYLDGPCLVLAGAGSGKTRVITQKIAHLIEAKGFEPRHIAAVTF 210 Query: 250 GRKAAEEMDERIRERL---------------HTEDITARTFHALALHIIQQGSKKVPIVS 294 KAA EM ER+ + L +T TFH+L + I++Q ++ V + Sbjct: 211 TNKAAAEMRERVGKLLEGKTLTTPGKEGRKVPVNQLTVCTFHSLGVQILRQEAEHVGLKP 270 Query: 295 KLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLAS 354 + + I E D+ L R++ + Sbjct: 271 QFSIMDSDDCFGMIQEQIG-----------------------------TTDKGLIRKIQT 301 Query: 355 RLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGL 414 + W + + E + ++ A + + + L A AVDF L Sbjct: 302 IISLWKNGLVTP-----------EEAMTIAANEDEHQAALVYRNYVATLHAYQAVDFDDL 350 Query: 415 IHQAIVILE-----KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDW 469 I + + R+ + +++L+DE+QD + + LL L + AVGDD Sbjct: 351 IRLPTELFAKNEPVRDRWQNRLRYLLIDEYQDTNACQYELLKLLA--GPRAAFTAVGDDD 408 Query: 470 QAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS 529 QAIY + GA + ++F + L+ YR RI AN I NP +K L S Sbjct: 409 QAIYGWRGATLENLAQLGKDFPKLHVIKLEQNYRSTVRILTAANNVIANNPKLFEKKLWS 468 Query: 530 LTNGDKKAVT--LLDESQLDALLDKLSGYAKPEERI-----LILARYHHMRPASLEKAAT 582 DE + K E R IL R + + Sbjct: 469 EHGMGDSITVTPCNDEEHEAESVVFRLSAHKFERRTQFRDYAILYRGNFQARIFEQVLRR 528 Query: 583 RWPKL 587 Sbjct: 529 ERIPY 533 Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 18/101 (17%) Query: 583 RWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEE 642 + T+HASKG + +V +VG++EG + + + +D EE Sbjct: 726 EEDPDAVRLSTVHASKGLEYPHVFLVGVEEGIMPHSGGSDDGPI--------DDERIEEE 777 Query: 643 RRLMYVALTRARHRVWALFNKEN----------PSPFVEIL 673 RRLMYVA+TRA+ + + K+ S F+ + Sbjct: 778 RRLMYVAITRAQRSLHLNWCKKRKRARETIVCEQSRFIAEM 818 >UniRef50_P45612 Probable DNA helicase II homolog n=4 Tax=Mollicutes RepID=UVRD_MYCCT Length = 722 Score = 361 bits (927), Expect = 5e-98, Method: Composition-based stats. Identities = 83/399 (20%), Positives = 167/399 (41%), Gaps = 47/399 (11%) Query: 203 RAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIR 262 AV+N + + ++AGAGSGKT V+ + +L+ + P +IL + F KAA+EM ER+ Sbjct: 16 AAVLNIDKPVRIIAGAGSGKTRVITTKIAYLIEKQNIDPSRILAVTFTNKAAKEMKERVL 75 Query: 263 ERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKA 320 + + + TFH+ +++ K + + K + + I K+ + + + Sbjct: 76 QITNNSFKSPFISTFHSWCSKVLRIDGKHIGLEDKFLIIDSDDQKRIIKSALKESNIELS 135 Query: 321 QAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEE 380 + D + +++ ++ W E + E Sbjct: 136 E---------------------NDKKTFDKKILYKIKEWK-----------EELVDPSEA 163 Query: 381 IRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GRFISPWKHIL 435 I + S K A + + ++ L N++DF L + ++ ++ + + ++L Sbjct: 164 ILNATSTLEKNFAVIYRLYQNTLLKNNSLDFDDLQIYVYRLFKQNNEILNKWRNAYDYVL 223 Query: 436 VDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGER 495 VDEFQD + + +L+ L + L VGD Q IY + GA++ + F++ + Sbjct: 224 VDEFQDTNELQFSLIKFLTINTNH--LTVVGDPDQTIYSWRGAKLDIILNFNKTYSNAIS 281 Query: 496 CDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL------DESQLDAL 549 L+ YR +I +++N FI+ N + K + + KK V + S + + Sbjct: 282 IVLNQNYRSTKQILDISNSFIKNNKFREHKEIFTNNKSGKKVVLKECNSKTSEASYVSSK 341 Query: 550 LDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 + +L + I IL R + ++ A + Q Sbjct: 342 IKELVKQGYHYKDIFILYRMNAWSQEFEKELANKKIPFQ 380 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 75/213 (35%), Gaps = 32/213 (15%) Query: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL 540 E F + LD T I + + Q+ + K + + + L Sbjct: 457 KNLDELIEVFKTAHQLYLDNT--NIEEILKY---LLIQSGYENKLKIRKEQDDLENINAL 511 Query: 541 LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQ 600 D+ + Y++ + I L + ++ +T+HA+KG Sbjct: 512 YDQLKRFDEDFDPKYYSEENKLIAFLQEEALTSDIDEAEQI-----DKVSLLTVHAAKGL 566 Query: 601 QADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWAL 660 + V I GL +G FP+ E+ + E EERR +YVALTRA+ ++ Sbjct: 567 ENKVVFITGLNQGI--FPSRISETSINE----------LEEERRALYVALTRAKDELFLT 614 Query: 661 F----------NKENPSPFVEILKNLDVPVARK 683 + ++ PS F+ L + Sbjct: 615 YVKGDYSHIMQSELKPSKFIHELDKDLYEFETQ 647 >UniRef50_C3WE38 UvrD/REP helicase n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WE38_FUSMR Length = 518 Score = 361 bits (926), Expect = 6e-98, Method: Composition-based stats. Identities = 109/505 (21%), Positives = 191/505 (37%), Gaps = 84/505 (16%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LN Q +A+++ E LV+AGAGSGKT +V R WL+ G S E+IL++ F RKA+EE Sbjct: 67 LNEEQKKALLSTEGQYLVIAGAGSGKTRTIVYRTAWLIENG-VSEEKILMVTFTRKASEE 125 Query: 257 MDERIRERLHTEDI--TARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 M ER++ L+ E++ TFH+ +I + + L E + + ++ Sbjct: 126 MKERLKNILNVEELKTVVTTFHSFCARLIFKYKALFEVD-NLNIMEEGEREKILLKIVER 184 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 K + ++ + + A+ + Sbjct: 185 FELNKKYKGKFYD----------------------------IEELSNRLEKLQNARLRLE 216 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FIS 429 P+E I + + ++ K +N ++ L+ I ++ R Sbjct: 217 DIFPKE-------HIDDIIKIKSEYRKYKKIKNVYEYDDLVEIVIKKFKENREFLKIIRD 269 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 +I+VDE+QD + + LL L + L VGDD+Q+IY F GA + F E+ Sbjct: 270 KIDYIVVDEYQDSNLAQRELLKLLVGE--DKNLMVVGDDYQSIYGFRGADFTNILKFGED 327 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVT--LLDESQLD 547 F + + L+ YR + I NR + K + ++ DE + Sbjct: 328 FPKAKLIKLEKNYRSSEEIIAYTNRIANNFKIKYNKKIYGTGRRGERVHINSFKDEEKEG 387 Query: 548 ALLDKLS---GYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFM---------TIH 595 + + P E ++IL R + + M ++H Sbjct: 388 RYICEKILAYKEKFPFEEMVILFRNKYTVKVMEKLLMEYKIPYYKKEMEEKRGVALYSLH 447 Query: 596 ASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARH 655 +SKG + + V I L +G +E EE+RL YV +RA+ Sbjct: 448 SSKGLEWEIVFIPTLLDGVFP---------------SSIEKENLEEEKRLYYVGCSRAKS 492 Query: 656 RVWALFNK---------ENPSPFVE 671 + + K + S F++ Sbjct: 493 FLHLSYPKYHYEKLGYFDKKSKFLD 517 >UniRef50_Q256I8 DNA/RNA helicase n=17 Tax=Chlamydiales RepID=Q256I8_CHLFF Length = 636 Score = 360 bits (924), Expect = 1e-97, Method: Composition-based stats. Identities = 88/414 (21%), Positives = 158/414 (38%), Gaps = 60/414 (14%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 + + LN AQ AV +LVLAGAG+GKT V+ R L+ G +P +IL + F Sbjct: 1 MLTLELNEAQIAAVTAPLSPVLVLAGAGAGKTRVVTCRILHLIKEG-IAPREILAVTFTN 59 Query: 252 KAAEEMDERIR----ERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 KAA+E+ ERI + + TFH+L + I+++ + + + + + Sbjct: 60 KAAKELKERILHQCPQVSGADIPMVCTFHSLGVFILRRSIQALNRENNFIIYDQSDTDKL 119 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 + + ++ + KK L+S + +S + Sbjct: 120 LKQCLQKFNLKKT-------------------------------LSSSIQYHISQAKNRL 148 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRF 427 ++ + + + K ++ LK NA+DF L+ + + + Sbjct: 149 LYPEDLDPEEYVDP----------VVSIYKEYQQRLKETNALDFDDLLFLTVKLFKDFPE 198 Query: 428 ISP-----WKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + WK +L+DE+QD + + + + ++ +FAVGD Q+IY + GA + Sbjct: 199 VKKEYSELWKALLIDEYQDTNHAQYMMAQTIAGKH--QNIFAVGDPDQSIYSWRGANIHN 256 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL-- 540 F +++ + L+ YR I AN IQ N +LKK L S+ +K Sbjct: 257 ILNFEQDYPQARVLRLEENYRSYGNILNAANALIQNNASRLKKNLRSVKGPGEKIRVFLG 316 Query: 541 -----LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 E + P I R + + R +I Sbjct: 317 KTDKDEAEFVASEIYRLHKRSNIPLRDFCIFYRTNFQSRTFEDALLRRRIPYEI 370 Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 38/102 (37%), Gaps = 22/102 (21%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 +++ MTIH KG + +VGL+E + EERR Sbjct: 541 IADRVNLMTIHNGKGLEFRIAFVVGLEENLFPHANSK------------GNYENLEEERR 588 Query: 645 LMYVALTRARHRVWALFNKEN----------PSPFVEILKNL 676 L YV +TRA+ ++ + PS F++ + Sbjct: 589 LCYVGITRAQDLLYLTAAQTRFLWGTVRVMKPSRFLKEIPRD 630 >UniRef50_B0RZ36 ATP-dependent DNA helicase n=21 Tax=Bacteria RepID=B0RZ36_XANCB Length = 658 Score = 360 bits (923), Expect = 1e-97, Method: Composition-based stats. Identities = 100/416 (24%), Positives = 156/416 (37%), Gaps = 59/416 (14%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 LNP Q+ AV++ E LLVLAGAGSGKT V+V + L+A G ++I + F K+A Sbjct: 2 HGLNPPQSAAVLHCEGPLLVLAGAGSGKTRVIVEKIAHLIAIGRYPAKRIAAITFTNKSA 61 Query: 255 EEMDERIRERL---HTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 +EM ER+ +R+ + +T TFHAL L +Q + + I + Sbjct: 62 KEMRERVAKRIRGDGADGLTICTFHALGLKFLQIEHAAAGLKRGFSIFDSDDAAAQIKDL 121 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 +S + G + Sbjct: 122 MHGAKPDA---------------------------------IEDAKNLISRAKNAGMSPE 148 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR----- 426 + +A+A S R K A L + ++ L NAVDF LI + ILE Sbjct: 149 QAMAAA-------RSNREKEAASLYERYQARLTTFNAVDFDDLIRLPVQILEANEEIVMG 201 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + ++LVDE QD + + LL L + VGDD Q+IY + GA Sbjct: 202 WRERIGYLLVDECQDTNDAQYRLLKMLA--GPRGNFTCVGDDDQSIYAWRGANPENLQQM 259 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQL 546 ++ E L+ YR ++R+ AN I NP + K L S D + + + + Sbjct: 260 GRDYPALEIIKLEQNYRCSNRVLRAANALIAHNPHEHLKTLWSD-QADGERIRVWECRDS 318 Query: 547 DALLDKLSGY--------AKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTI 594 + +K++ P IL R + + + T Sbjct: 319 EHEAEKVAAEISFLGTAKQVPWSDFCILFRGNFQSRPLEKALQLLRVPYHLTGGTA 374 Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats. Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 23/108 (21%) Query: 577 LEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVED 636 L + Q+ MT+HASKG + YV IVG ++G + E Sbjct: 530 LSRNDKDDGGNQVRMMTMHASKGLEFRYVFIVGCEDGVLPHEVSLEEGN----------- 578 Query: 637 FPDAEERRLMYVALTRARHRVWALFNK----------ENPSPFVEILK 674 EERRL+YV +TRA+ ++W ++K PS F + + Sbjct: 579 --LQEERRLLYVGITRAKQQLWMSYSKLTRKFGEHVRLKPSRFFDEIP 624 >UniRef50_C1ZKV9 DNA/RNA helicase, superfamily I n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZKV9_PLALI Length = 680 Score = 358 bits (920), Expect = 3e-97, Method: Composition-based stats. Identities = 93/412 (22%), Positives = 155/412 (37%), Gaps = 53/412 (12%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 ++ S LN Q AV LLVLAGAG+GKT V+ R L+A G PE+IL + F Sbjct: 2 LDISHLNRPQQEAVRTHRGPLLVLAGAGTGKTRVITYRMADLIAAG-VDPERILSVTFTN 60 Query: 252 KAAEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFI 308 KAA EM +R L + T TFH+ + I++Q + + E Sbjct: 61 KAAREMLDRTSLLLGRTMKKRPTISTFHSWCVGILRQEIDSLGYPKQFVIYDRGDQESAA 120 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 + + D L +++ RW M Sbjct: 121 RKALQVL-------------------------KMTDTALKPGDLLAQISRWKMQGVMPDL 155 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRF- 427 AQ S +L + ++ ALKA VDF L+ + + Sbjct: 156 AQE-----------IADSDHEQLAGMAYRRYQLALKAAGGVDFDDLLFLTFQLFKHHPEA 204 Query: 428 ----ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 + + + +DE+QD + + L+ ++ +++ L VGDD Q+IY + GA++ Sbjct: 205 LERQQNRFDFVQIDEYQDTNELQFRLIESIVRRH--QNLCVVGDDDQSIYGWRGAEVKHI 262 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDE 543 F ++F + L+ YR I ++AN+ + N G+ +K L + G + Sbjct: 263 LGFKQSFPAAKVVRLEDNYRCTESIIQLANQLVAHNRGRHEKRLIAHRGGTSVVFREYPD 322 Query: 544 SQLDAL------LDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 Q +A + I IL R + + + +I Sbjct: 323 EQAEAEGVVRDIAYLIHQLNVRPCEIAILFRTNEQPRIFEHELRRKQIHYRI 374 Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 18/104 (17%) Query: 581 ATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDA 640 R + I MT+H++KG + + V +VGL+EG + E Sbjct: 547 PERPDENAITLMTLHSAKGLEFERVYLVGLEEGILPHKRSVDEEF--------ENPSSVE 598 Query: 641 EERRLMYVALTRARHRVWALFNKEN----------PSPFVEILK 674 EERRL YV +TRA+ + ++ PS F++ ++ Sbjct: 599 EERRLCYVGITRAKDFLTITRSQSRVKWGKKRETKPSRFLKEMR 642 >UniRef50_Q3F0Y3 ATP-dependent DNA helicase pcrA n=2 Tax=Bacillus thuringiensis RepID=Q3F0Y3_BACTI Length = 653 Score = 358 bits (920), Expect = 3e-97, Method: Composition-based stats. Identities = 92/478 (19%), Positives = 172/478 (35%), Gaps = 68/478 (14%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN +Q RAV+ E +LVLAGAGSGKT VL R +LL +G P +IL + F K+A+ Sbjct: 12 TLNSSQQRAVLTTEGRVLVLAGAGSGKTKVLTTRIAYLLQQG-VDPWRILAITFTNKSAK 70 Query: 256 EMDERIRER-LHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 EM ER+ TFH++ I+ + + + + Q Sbjct: 71 EMKERVTGMDSRASKSWIGTFHSICNRILSTNIHHLG-MDMFTLMDDTDQKALVKTAAVQ 129 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 + D+ + L S++ W + G AQ+ Sbjct: 130 LGLEA-------------------------DKNIVYNLLSQISLWKNEAISPGQAQS--- 161 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FIS 429 K ++ + + ++ N D+ L+ + + + + + + Sbjct: 162 -------NSTGDKEKLAVSHIYQKYEDLKAIHNYFDYDDLLLKTVHLFQNNPELLGRYQN 214 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 ++++LVDEFQD + + L+ L +++ +F VGD Q+IY F A++ ++ + Sbjct: 215 LFRYVLVDEFQDTNKIQFDLIEMLSQKHG--NIFLVGDADQSIYSFRSAKIENILSYQKI 272 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL-------D 542 E + L YR I +N + N +L++ S++ Sbjct: 273 HPETQLILLQENYRSTQNIVNASNSLVGNNKMRLEREAFSVSGVGDDIHVFRFNDASREA 332 Query: 543 ESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQA 602 + +++ + +L R + +I T + ++ Sbjct: 333 DFVARMIVNMKKATQCDWKDFAVLYRMNFQSKHLELALRDENIPYKIVGTTSFYDR-KE- 390 Query: 603 DYVIIVGLQEGSDGFPAAARESIMEEALLPPVED---------FPDAEERRL-MYVAL 650 I L + +E + P + A ERR+ +VAL Sbjct: 391 ----IKDLVSYIRASHNLTDDYALERVINVPSRKIGKTTIEKIYAFAHERRIPFFVAL 444 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 57/148 (38%), Gaps = 26/148 (17%) Query: 542 DESQLDALLDKLSGYAKPEERILILAR--YHHMRPASLEKAATRWPKLQIDFMTIHASKG 599 ++ + L YA+ + + +L+ + + + ++H++KG Sbjct: 508 EDETRIENVTHLRDYARHWDAQEKEINSLAQFVSEITLDGDSDEDEEDFVTLTSVHSAKG 567 Query: 600 QQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWA 659 + ++GL++ + + EERRLMYVA+TRA R++ Sbjct: 568 LEWPETFVIGLEDDVFPHYRSK------------QKLSDLEEERRLMYVAMTRAGKRLYL 615 Query: 660 LFN------------KENPSPFVEILKN 675 + ++ PSPF+ + + Sbjct: 616 THSAFKYEYGSQKPIRQKPSPFLGEIPD 643 >UniRef50_Q6KHF5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma mobile RepID=Q6KHF5_MYCMO Length = 723 Score = 358 bits (920), Expect = 3e-97, Method: Composition-based stats. Identities = 94/415 (22%), Positives = 164/415 (39%), Gaps = 53/415 (12%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 + LN Q AVV + L ++AGAGSGKT VLV + +L+ + P QIL + F Sbjct: 5 EKNLLDSLNKDQKLAVVFNDSPLRIIAGAGSGKTRVLVHKIAYLIQKMNVKPYQILAVTF 64 Query: 250 GRKAAEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 KAA EM ERI+ + + TFHAL ++I+++ + A Sbjct: 65 TNKAANEMKERIKTLVDNHESEPLISTFHALCVYILRRDIDVLKYPKNFTILDVADQFDI 124 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 + ++ K + + ++S +++ Sbjct: 125 LKNIYEKFDINKIDIT-----------------------------LTSMINYISFHKINK 155 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR- 426 + E + + + LK +DF+ L+ + + EK Sbjct: 156 TPIEVLETEDNSEDDRIK-------LKIYLEYNEILKKLALLDFNDLLLKTQELFEKFPE 208 Query: 427 ----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + +K+ILVDEFQD SP + ++ L + + L VGD Q IY + GA ++L Sbjct: 209 IKLKWSRRFKYILVDEFQDTSPIQYEIIKTLAQNH---NLTIVGDPDQTIYSWRGANVNL 265 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD 542 FH++F + +L+ YR +I + AN I N +L+K L + T ++ + Sbjct: 266 ILDFHKDFENAKTINLNLNYRSTEKILKHANSLIHFNKKRLEKDLVAYTKQGQEVIFHHA 325 Query: 543 ---ESQLDALLDKLSGYAKPEE----RILILARYHHMRPASLEKAATRWPKLQID 590 E + ++DK+ E+ I I+ R + + Q+ Sbjct: 326 LSPELEARWVVDKIKWLISIEKAKLSEISIIYRANFYSKNFEDALLRESIHHQVH 380 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 28/132 (21%), Positives = 47/132 (35%), Gaps = 19/132 (14%) Query: 552 KLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQ 611 + + + + + A+ K + M IH KG + YV +VGL Sbjct: 514 LIIISNWFRNNPKKTFQDYFEEISLVPNASQEDDKNTVSLMNIHNCKGLEFSYVFLVGLS 573 Query: 612 EGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFN--------- 662 E A +D EERRL YVA+TRA+ ++ + Sbjct: 574 EEILPSKKALEND---------FDDSNLEEERRLAYVAITRAKKMLFLTDSDGYLFGNFK 624 Query: 663 -KENPSPFVEIL 673 ++ S F+ + Sbjct: 625 TQKKTSRFIGEM 636 >UniRef50_Q6AJ72 Probable ATP-dependent DNA helicase, UvrD/REP family n=1 Tax=Desulfotalea psychrophila RepID=Q6AJ72_DESPS Length = 733 Score = 358 bits (920), Expect = 3e-97, Method: Composition-based stats. Identities = 87/414 (21%), Positives = 155/414 (37%), Gaps = 46/414 (11%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 ++ S LNPAQ AV E +LV+AGAGSGKT L+ R LL +G +PE ILLL F Sbjct: 14 SPIDLSGLNPAQHLAVTTTEGPVLVIAGAGSGKTRTLIYRVAHLLDKG-VAPESILLLTF 72 Query: 250 GRKAAEEMDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 RKA++EM R E L + TFH +A +++Q + A E Sbjct: 73 TRKASQEMVWRAGELLGENCSRVMGGTFHGVANMLLRQYGSHMGWGKGFTIIDRADAEGI 132 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 I + K + + + + + +E + + D ++R+ Sbjct: 133 INLLKSSLEMGKGDKRFPGKRIIINIISGSINKSTPMEELIHDQYGHLADHCADILRLG- 191 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRF 427 + + + +D+ L+ ++L++ Sbjct: 192 -----------------------------RHYHTFKRDNVLMDYDDLLVNWKLLLQESPE 222 Query: 428 IS-----PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + +++++VDE+QD + +A ++ L ++S + VGDD Q+IY F GA Sbjct: 223 VRSMMSHRFRYVMVDEYQDTNLIQADIIRLLASEHS--NVMVVGDDSQSIYSFRGADFYN 280 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD 542 F + F + L+ YR I + N I + K L+S G+++ + Sbjct: 281 IMRFPKEFPGAKLIKLEENYRSTQPILSLTNDLIANASEKYTKSLHSNIKGEQRPIVYGA 340 Query: 543 ESQLDA------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQID 590 + + + I +L R + + Sbjct: 341 RDEQAEATFILARVQQHIRDGIDPSEIAVLFRSGFHSYKLEIGLGAAGIEFEKR 394 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 59/155 (38%), Gaps = 24/155 (15%) Query: 536 KAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIH 595 + + D + + L+ G + + + P + T K ++ TIH Sbjct: 502 ERLYSDDYPKREKDLEHFKGVIAGYDDLQKFIDDTTLDPPAPTADKTPDGK-RMVLSTIH 560 Query: 596 ASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARH 655 +SKG + D V ++GL EG EERRL+YVA TRAR Sbjct: 561 SSKGLEFDAVFVMGLAEGRFPHANTVGFGP------------QWEEERRLLYVAATRARK 608 Query: 656 RVWALFNKE-----------NPSPFVEILKNLDVP 679 ++ + ++ SP++ LK++ Sbjct: 609 HLYLTYPRQMMTPDRQFKRVGMSPYLVELKDMLYE 643 >UniRef50_B9KCT9 ATP-dependent DNA helicase n=1 Tax=Campylobacter lari RM2100 RepID=B9KCT9_CAMLR Length = 687 Score = 358 bits (919), Expect = 4e-97, Method: Composition-based stats. Identities = 88/415 (21%), Positives = 159/415 (38%), Gaps = 54/415 (13%) Query: 187 DFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILL 246 FF LN +Q A+++ + ++L+LAGAGSGKT + AR +L+ + L Sbjct: 2 SFFE-----GLNDSQKEAIMHIDGAMLILAGAGSGKTKTITARLAYLIDHIGVPAQNTLT 56 Query: 247 LAFGRKAAEEMDERIRERLHTEDIT---ARTFHALALHIIQQGSKKVPIVSKLENDTAAR 303 L F KAA M R L +++ TFH L ++ S+++ + Sbjct: 57 LTFTNKAANVMKTRALALLQDQNLHNPLLCTFHKFGLLFLRLYSERINRANNFVIIDTDD 116 Query: 304 HELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLM 363 + + + + + + + + + + Sbjct: 117 KKKILKDLASENL-----------------------------QSSLASIGAYISNFKNQS 147 Query: 364 RMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE 423 + + E+ E ++D +K + + L + ++ L N +DF L+ ILE Sbjct: 148 KSAQEIRKEL-----EFLKDEKNKNYEEIIHLYEQYEHFLIQNNFMDFDDLLMLTNKILE 202 Query: 424 KGRFI----SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQ 479 F + +I VDE+QD + + +L L + + VGDD Q+IY + GA+ Sbjct: 203 DEAFAKEQSQKYTYITVDEYQDTNALQYQILKKLCASHE--NICVVGDDDQSIYGWRGAK 260 Query: 480 MSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVT 539 + F E F + L+ YR S I + AN I+ N +L K L + ++ Sbjct: 261 IENILNFKEQFNNVKLVKLEQNYRSTSAILQAANELIEHNRKRLGKTLICTKDEGEEITI 320 Query: 540 LLDESQLDALLD------KLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 L ++ + KL I IL R + + A E + + Sbjct: 321 LQNDDEKIESFKVAREVSKLLNSGINPSEIAILYRVNALSRALEEAFSKEKIPFK 375 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 25/98 (25%) Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 K I M+IHASKG + DYV I+GL+EG + E EERR Sbjct: 540 DKESICIMSIHASKGLEFDYVFIIGLEEGFFPLTS---------------ESSNIEEERR 584 Query: 645 LMYVALTRARHRVWALFNKEN----------PSPFVEI 672 L YVA+TRA+ +++ + S F Sbjct: 585 LAYVAITRAKKKLYLSYANSRFYKGSRTRLEKSRFFGE 622 >UniRef50_A9M0G6 ATP-dependent DNA helicase n=38 Tax=Betaproteobacteria RepID=A9M0G6_NEIM0 Length = 690 Score = 358 bits (918), Expect = 5e-97, Method: Composition-based stats. Identities = 96/432 (22%), Positives = 163/432 (37%), Gaps = 59/432 (13%) Query: 176 AYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLA 235 ++ A T DF + LNP Q AV LLVLAGAGSGKT V+ + +L+ Sbjct: 2 RHSTASKTAQTDFRQHQNMMKLNPQQLEAVRYLGGPLLVLAGAGSGKTGVITQKIKYLIV 61 Query: 236 RGEASPEQILLLAFGRKAAEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPI 292 P + + F KAA EM ER+ + LH T +T TFH+L + I+++ + + Sbjct: 62 NVGYLPHTVAAITFTNKAAAEMQERVAKMLHKSQTRGLTICTFHSLGMKILREEANHIGY 121 Query: 293 VSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRL 352 + I E ++ + Sbjct: 122 KKNFSILDSTDSAKIIGELLGGTGKEAVF-----------------------------KA 152 Query: 353 ASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFS 412 ++ W + ++ ++ + + A + +++ L++ AVDF Sbjct: 153 QHQISLWKNDLKTPEDV-----------VQTASNAWEQQTARVYASYQETLQSYQAVDFD 201 Query: 413 GLIHQAIVILE-----KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGD 467 LI V+L+ + ++ +++LVDE QD + + L+ L AVGD Sbjct: 202 DLIRLPAVLLQQNSEVRNKWQRRLRYLLVDECQDTNTCQFTLMKLLTGAEGM--FTAVGD 259 Query: 468 DWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527 D Q+IY + GA M EN+ + + L+ YR +RI ++AN+ I+ NP K L Sbjct: 260 DDQSIYAWRGANMENLRKMQENYPQMKVIKLEQNYRSTARILKIANKVIENNPKLFTKKL 319 Query: 528 NSLTNGDKK--AVTLLDESQLDALL-------DKLSGYAKPEERILILARYHHMRPASLE 578 S + V +E + + G +L R H E Sbjct: 320 WSKLGEGEPVKVVACQNEQHEADWVVSQIVKQKLIGGDKTQYADFAVLYRGKHQARIFEE 379 Query: 579 KAATRWPKLQID 590 ++ Sbjct: 380 ALRGARIPYRLS 391 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 52/129 (40%), Gaps = 23/129 (17%) Query: 565 ILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARES 624 I+ + +L + + T+HA+KG + YV +VG +EG + E Sbjct: 542 IIELAQTVALMTLLEGKDEEETDAVSLSTLHAAKGLEYPYVFLVGCEEGVLPHNDSIEEG 601 Query: 625 IMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILK 674 + EERRLMYV +TRA+ ++ + PS F++ + Sbjct: 602 NV-------------EEERRLMYVGITRAKRQLTLTHCVKRKKQGTWQFPEPSRFIDEMP 648 Query: 675 NLDVPVARK 683 D+ + + Sbjct: 649 QEDLKILGR 657 >UniRef50_B1XW04 UvrD/REP helicase n=41 Tax=Bacteria RepID=B1XW04_POLNS Length = 788 Score = 358 bits (918), Expect = 6e-97, Method: Composition-based stats. Identities = 96/425 (22%), Positives = 159/425 (37%), Gaps = 68/425 (16%) Query: 193 ESSPLNPAQARAVVNGEHS-------LLVLAGAGSGKTSVLVARAGWLLARGEASPEQIL 245 + LNP Q AV + L+LAGAG GKT VL R WL+ G+ SP +L Sbjct: 5 LLANLNPEQREAVTLPPVNENGQSQSALILAGAGGGKTRVLTTRIAWLIQTGQVSPIGVL 64 Query: 246 LLAFGRKAAEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAAR 303 + F KAA+EM R+ L T + TFH L +++ K+ + S + Sbjct: 65 AVTFTNKAAKEMMLRLSAMLPINTRGMWIGTFHGLCNRLLRAHHKEAGLPSTFQILDTQD 124 Query: 304 HELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLM 363 I K DDEK A +L +++ Sbjct: 125 QLSAIKRLLKGLK--------------------------VDDEKYP---AKQLQYFIAHA 155 Query: 364 RMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE 423 + G ++ + MA L A+ + E VDF+ L+ ++ +L+ Sbjct: 156 KERGQRAKDL---------SVGDDFQAKMAQLYAAYDEQCQREGVVDFAELLLRSYELLK 206 Query: 424 -----KGRFISPWKHILVDEFQDISPQRAALLAALRKQN---------SQTTLFAVGDDW 469 + + ++HIL+DEFQD + + A L L + +++FAVGDD Sbjct: 207 HSEAIRTHYQERFRHILIDEFQDTNALQYAWLKLLSGHDASSINVSGMGSSSVFAVGDDD 266 Query: 470 QAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS 529 Q+IY F GA + + + + L+ YR + I + AN I N +L K L + Sbjct: 267 QSIYAFRGADVENMRLYEKQYHPL-MVKLEQNYRSHGHILDTANHLIANNSERLGKNLRT 325 Query: 530 LTNGDKKAVTLL------DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATR 583 + + + + L + L + +L R + + Sbjct: 326 DADHGEPVRIYEAPSDHAEAAWLVDEIKALVNSGIKRTEVALLYRSNAQSRIIEHALFSA 385 Query: 584 WPKLQ 588 + Sbjct: 386 GIPYR 390 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 50/128 (39%), Gaps = 22/128 (17%) Query: 566 LARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESI 625 LA + + + + MT+H++KG + V I GL+EG + E Sbjct: 555 LAAFLSHASLEAGDNQAQAGQDAVQLMTVHSAKGLEFTSVFITGLEEGLFPHENSVNEQN 614 Query: 626 MEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKN 675 EERRLMYVA+TRA+ R++ + PS F+E L + Sbjct: 615 ------------GLEEERRLMYVAITRAKERLYLSHTQSRMLHGQVRYNMPSRFLEELPS 662 Query: 676 LDVPVARK 683 + Sbjct: 663 DSLKWLTP 670 >UniRef50_D0JAI1 ATP-dependent DNA helicase n=2 Tax=Blattabacterium RepID=D0JAI1_BLASB Length = 709 Score = 358 bits (918), Expect = 6e-97, Method: Composition-based stats. Identities = 83/412 (20%), Positives = 156/412 (37%), Gaps = 59/412 (14%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN +Q + + +LVLAGAGSGKT V+ R ++ +P IL L F +KAA+ Sbjct: 2 SLNSSQRKIIETINGPILVLAGAGSGKTRVITYRIVHMIQNIGINPSNILALTFTKKAAK 61 Query: 256 EMDERIRERLHTE---DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM RI + + IT TFH++ ++++ S + S E I + Sbjct: 62 EMKHRISNMIDQKKLNQITLGTFHSIFSILLRKESHLLGYKSNYTIYDQRDSENVIKKIL 121 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 + + + + + + + + + + Sbjct: 122 EDINLDISLST--------------------------KEIRRIISEYKNNL--------- 146 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----F 427 I +K+ + + + K++ A+DF ++ + + Sbjct: 147 -------YINKKNNKQSECLIKIYKSYIKRCLQAEALDFDDILLHTNHLFSHFPNVLRKY 199 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + +K+IL+DE+QD + + ++ +L Q+ LF VGDD Q+IY F GA++S FH Sbjct: 200 QNKFKYILIDEYQDTNLSQNTIIKSLAFQHK--NLFVVGDDAQSIYAFRGAKISNILNFH 257 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLD 547 ++ + L+ YR I + +N I N Q+ K + + +K S+ + Sbjct: 258 IDYKNAKVFRLEQNYRSTHHIVQASNNIISFNKNQILKKIWTNNEKGEKVKIYSASSEKE 317 Query: 548 ALL-------DKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFM 592 L + + IL R + + +I Sbjct: 318 EALYVASSIFSIIKKTKYHYKDFAILYRANMQSNIIEYALKEKNIPYKIYGS 369 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 54/167 (32%), Gaps = 22/167 (13%) Query: 527 LNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPK 586 L K + + + + E L + + + Sbjct: 478 LKEDPKNYKNENFQYILNNIFCYVSEQKKLKDNGEISLSGFLQYFYLEIDEDMNHDENEE 537 Query: 587 LQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLM 646 ++ MT+H SKG + V I+GL+E ++ F EERRL Sbjct: 538 NKVSLMTVHLSKGLEFSIVFIIGLEENLFPSKSSLDN------------QFKIEEERRLF 585 Query: 647 YVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVARK 683 YVALTRA+ + + + PS F+ L + + Sbjct: 586 YVALTRAQKKAVLTYARSRFLWGERKMTLPSRFINELNKNFIDRENQ 632 >UniRef50_B0MNA1 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0MNA1_9FIRM Length = 792 Score = 357 bits (917), Expect = 8e-97, Method: Composition-based stats. Identities = 89/449 (19%), Positives = 155/449 (34%), Gaps = 92/449 (20%) Query: 198 NPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGE------------------- 238 N Q +AV ++L++AGAGSGKT+VL R +L G Sbjct: 19 NDMQKKAVFRINGAVLIVAGAGSGKTTVLCNRIANMLLFGNAYNSNTVRELSDDDVAFAQ 78 Query: 239 ------------------------ASPEQILLLAFGRKAAEEMDERIRER-LHTEDITAR 273 P IL + F KAA E+ ER+ + I A Sbjct: 79 SFLAGEIDNFDAAERLSEIFGEDRVKPWNILAVTFTNKAAAELKERLENMGADVDGIWAA 138 Query: 274 TFHALALHIIQQGSKKVP--IVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTE 331 TFH+ + I++Q +++ S I K+ Sbjct: 139 TFHSACVRILRQDIEELGMGYKSNFTIYDTDDQLKVIKTVMKE----------------- 181 Query: 332 EMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKL 391 N D + + + + R + + + ++ Sbjct: 182 --------HNISDKAVTPKAVQNLISRSKDKLITPDKFSTKGKNGSD-------DYQLST 226 Query: 392 MAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FISPWKHILVDEFQDISPQR 446 + ++ L+A NA+DF +I + + + + +++I+VDE+QD + + Sbjct: 227 AKTIYTDYQARLEAANALDFDDIIMLTVKLFAHCPDVLSHWQNRFRYIMVDEYQDTNAAQ 286 Query: 447 AALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNS 506 L++ L + + L VGD+ Q+IYRF GA + +F E F E L+ YR + Sbjct: 287 YKLVSLLAEGSG--NLCVVGDEDQSIYRFRGATIENILSFEEQF-GAEVIKLEQNYRSTA 343 Query: 507 RIGEVANRFIQQNPGQLKKPLNSLTNGDKKA---VTLLDESQLDALLDKLS---GYAKPE 560 I + AN I N K L S K ++ + + +++ K Sbjct: 344 TILKAANAVIANNTQHKDKNLWSDLGDGDKIRMDRFSTEQEEAMFITERILDGVKQGKKY 403 Query: 561 ERILILARYHHMRPASLEKAATRWPKLQI 589 +IL R + A +I Sbjct: 404 ADHVILYRNNAQSRTVETTLAKSGIPYKI 432 Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 45/121 (37%), Gaps = 22/121 (18%) Query: 566 LARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESI 625 L+ + + + + MT+H++KG + D V +VG +E Sbjct: 582 LSEFLEQVALVSDMDSFEADDDKAVLMTMHSAKGLEFDTVFVVGAEENIFP--------- 632 Query: 626 MEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKN 675 + EERRL YVA+TRA+ ++ K+ S FV + + Sbjct: 633 ---GYRSQFDPMEIEEERRLAYVAITRAKRHLYFTCAKQRMLYGQTMRNKVSRFVVEIPS 689 Query: 676 L 676 Sbjct: 690 Q 690 >UniRef50_C5TB61 UvrD/REP helicase n=3 Tax=cellular organisms RepID=C5TB61_ACIDE Length = 778 Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats. Identities = 91/416 (21%), Positives = 157/416 (37%), Gaps = 58/416 (13%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 S+ LN AQ +AV + + LVLAGAGSGKT V+ + ++ +G P +I + F KA Sbjct: 89 SAGLNLAQLQAVHYTQGACLVLAGAGSGKTRVITHKIAHMIEQG-LEPRRIAAITFTNKA 147 Query: 254 AEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 A EM ER + + +D+ TFHAL + ++++ + + + A + + Sbjct: 148 AAEMRERAKGLIGRRAKDVLVCTFHALGVRMVREDGAVLGLKPQFSIMDADDVAGILKD- 206 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 D R+ + +W ++ A A Sbjct: 207 ---------------------------AAGGTTDLATARQWQWTISKWKNMGLSSEQALA 239 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-FISP 430 + +A ++ ++ L A +VDF LI + +L + Sbjct: 240 QAADDNERS-----------IAVVMARYEERLAAYQSVDFDDLISMPLRLLRDHPEVRAK 288 Query: 431 WK----HILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 W+ H+LVDE+QD + + LL L + AVGDD Q+IY + GA + Sbjct: 289 WQALLGHVLVDEYQDTNATQYELLKLLVGERGH--FTAVGDDDQSIYGWRGATLDNLKKL 346 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQL 546 ++F + + L+ YR S I AN I NP K L S + + +++ Sbjct: 347 PQDFPQLKVIKLEQNYRSTSAILRAANNVIGPNPKLFPKTLFSELGEGEPVRVVDADTEE 406 Query: 547 DALLDKLSGYAK---------PEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 ++ + IL R +H + ++ T Sbjct: 407 HEAERAVARIQSLRAASNPPPDWKSFAILYRANHQAKPFEKALRRANIPYKVSGGT 462 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 48/129 (37%), Gaps = 12/129 (9%) Query: 566 LARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESI 625 L + + + T+HASKG + +V++VG+ EG F + Sbjct: 627 LLEVSQTIALLSTISEREKEQDMVTLSTLHASKGLEWPHVVLVGVTEGMLPF--KLDDDE 684 Query: 626 MEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKN 675 + + EERRLMYV +TRA+ + + K+ PS F+ + Sbjct: 685 GRQQKVTDDTLQRLQEERRLMYVGITRAQRTLAVSWTKKRKKGREMVAAQPSRFIAEMGL 744 Query: 676 LDVPVARKP 684 P Sbjct: 745 DKTTAREDP 753 >UniRef50_C2KQX4 Possible UvrD/REP helicase n=3 Tax=Mobiluncus RepID=C2KQX4_9ACTO Length = 569 Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats. Identities = 120/561 (21%), Positives = 205/561 (36%), Gaps = 92/561 (16%) Query: 151 NCREAWRKCQAWLK---DIESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVN 207 + A K W++ I++ + + +L + ++ L+P+Q + Sbjct: 25 SVSTACGKLLDWMELSFRIKTLTPIKHPTKGKKLLETPRNDQPEMLLEQLDPSQREVATH 84 Query: 208 GEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHT 267 +L VLAGAG+GKT + R + + G + E IL L+F +KAA EM ER+ L Sbjct: 85 QHGALCVLAGAGTGKTRAITYRIAYGVRTGAVAAENILALSFTQKAAGEMRERLTG-LGV 143 Query: 268 EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQ 327 + RTFH+ AL + +V L + + A R +AQ Sbjct: 144 PGVETRTFHSAALAQARFFWPQVVGGEILRVMSGKASLVTAAAARLGLDPSRAQ------ 197 Query: 328 WLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSK 387 R LA ++ + A+ + + Sbjct: 198 ---------------------VRDLAGEIEWAKVSLLAPDEYVEAARAAGR---MGVANL 233 Query: 388 RIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FISPWKHILVDEFQDI 442 + +A L A++ A+DF ++ +L++ + +++ +VDE+QD+ Sbjct: 234 NPERIADLAAAYEEVKAEAQALDFEDILLVCAGMLDEREDVLRAVQARYQYFVVDEYQDV 293 Query: 443 SPQR-AALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTT 501 SP + LL L + L VGD Q IY F+GA S T F + E + +L Sbjct: 294 SPLQNYLLLRWL---GHRRDLAVVGDAAQTIYSFAGATPSFLTDFTRGYPEAKVVELTRD 350 Query: 502 YRFNSRIGEVANRFIQQNPGQLKKPL-----NSLTNGDKKAVTLL---DESQLDALLDK- 552 YR ++ +AN+ + +PL D V D+ + + K Sbjct: 351 YRSTPQVVGLANQVLADAKDAAGRPLGGTVQLVSQREDGPDVQWFIAEDDQTEASTVAKR 410 Query: 553 ---LSGYAKPEERILILARYHHMR-----------------------PASLEKAATRWPK 586 L + I IL R + + + P+ Sbjct: 411 SWHLMKQGTNPKDIAILFRTNSQAGLFGTELARMGLPYVVKDQVKSGFEADGASKDSIPR 470 Query: 587 LQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLM 646 I ++H++KG + + V +VG EG + D EERRL Sbjct: 471 EAITLASLHSAKGLEWEAVFLVGASEGLLP-------------INLSTTDAQIEEERRLT 517 Query: 647 YVALTRARHRVWALFNK-ENP 666 YV +TRAR + + K + P Sbjct: 518 YVGITRARSLLTISYAKGKRP 538 >UniRef50_C9RM93 UvrD/REP helicase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RM93_FIBSS Length = 843 Score = 356 bits (914), Expect = 2e-96, Method: Composition-based stats. Identities = 84/427 (19%), Positives = 154/427 (36%), Gaps = 51/427 (11%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 V LNP QA A +L+LAGAGSGKT + + L++ + ++L + F Sbjct: 12 DSVLDKELNPEQAAAAKKINGPMLILAGAGSGKTRCITYKIAHLVSYHKIDSNRVLAVTF 71 Query: 250 GRKAAEEMDERIRERLHTEDI--TARTFHALAL----------HIIQQGSKKVPIVSKLE 297 KAA EM +RI++ L+ TFH++ L +I+ K + Sbjct: 72 TNKAAREMKDRIQKLLNCRKPFTWMGTFHSVCLKLLKLCLAKESVIKALGGKW-FDANFS 130 Query: 298 NDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLD 357 + + E K D +++ S + Sbjct: 131 IYDDDDQKRILKEILKDDLGD------------------------DYDVNELKKVHSAIS 166 Query: 358 RWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQ 417 R+ + + ++ + + + A A++ L NA+DF L+ Sbjct: 167 RFKNTVLYKND--KAVLQTPDVAALNAEFADEERKARYYAAYQKKLAESNAMDFDDLLFN 224 Query: 418 AIVILE-----KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAI 472 + +L+ + +++++VDE+QD + + LL L + VGDD Q+I Sbjct: 225 TVRMLQMVPNLAEQLRERFQYVVVDEYQDTNDVQYELLKLLI-NRDTKNVTVVGDDDQSI 283 Query: 473 YRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQN--PGQLKKPLNSL 530 Y + GA + + FH +F L+ YR + I + A I N P +++K + S Sbjct: 284 YGWRGANIKIIRNFHRDFAPVTIVKLERNYRSTANIVKGAGSVIAHNVRPAEMQKNVFSK 343 Query: 531 TNGDK-KAVTLLDESQLDAL---LDKLSGYAKPEERILILARYHHMRPASLEKAATRWPK 586 + V ++ + +A + I R + + Sbjct: 344 EEAGELIHVRYFEDDRAEASNIAKTVAQAGPDFYAKTAIFYRTNAQSRVLEKALNDLRIP 403 Query: 587 LQIDFMT 593 I T Sbjct: 404 SVIFGGT 410 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 52/148 (35%), Gaps = 16/148 (10%) Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQAD 603 + LD +++ + + + + A + + K + MTIH +KG + + Sbjct: 536 ANLDEMINAIREFDEEHPGATLDAFLQDISLLTDGDKKVDTSKGLVTLMTIHMAKGLEFN 595 Query: 604 YVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNK 663 V + G + M E + EERRL YV TRA +++ + Sbjct: 596 TVHLAGCDDEIFPLVRGTSMLSMAEI------NEQMEEERRLFYVGCTRAEKKLYLYHAE 649 Query: 664 EN----------PSPFVEILKNLDVPVA 681 PS F++ L V Sbjct: 650 RRFFQGNIRPFAPSRFLKELDPSVVDFT 677 >UniRef50_C2ME74 ATP-dependent DNA helicase PcrA n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2ME74_9PORP Length = 778 Score = 356 bits (913), Expect = 2e-96, Method: Composition-based stats. Identities = 92/427 (21%), Positives = 165/427 (38%), Gaps = 51/427 (11%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 V+ + LN AQ AVV E LV+AGAGSGKT V+ + L+ +G +P+++ L F Sbjct: 2 VDLTALNEAQRVAVVYNEGPALVIAGAGSGKTRVITYKLAHLVDQG-WNPQRLYALTFTN 60 Query: 252 KAAEEMDERIRERLHTE---DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFI 308 KAA EM R+ E L + TFH++ I+++ + + + + I Sbjct: 61 KAAGEMRSRVSEMLGEGIAYRLRMGTFHSICGRILRRYAPLLGYSQDYSIYDTSDTKALI 120 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 K+ + D R+ R+ +++ Sbjct: 121 RNCIKEL-------------------------DLSDKSYTPTRVLKRISDAKNMLISP-- 153 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFI 428 + A+ E + + + L + K N++DF L+ V++ Sbjct: 154 ---QAYAANQEIRKYDTMNQEGELYKLYSLYTQRCKESNSMDFDDLLFLLNVLIRDFPEA 210 Query: 429 SP-----WKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 +L+DE+QD + + L L +++ +FAVGDD Q+IY F GA+++ Sbjct: 211 HQEIKSGIDFLLIDEYQDTNTSQFELARHLVADHNR--IFAVGDDAQSIYSFRGARIANI 268 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDE 543 +F + F + L+ YR I AN I+ N ++ K + + +K Sbjct: 269 LSFKQAFAGAKLFKLEQNYRSTGHIVSSANALIEHNQQRIPKEVYTDLGEGEKLQLYHYT 328 Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQAD 603 S + + + + I L + + K + + S+G Sbjct: 329 SSDEEATRLIDIITQRHDEEQI----PLSDQTILYRTNAQSRKFEEVLL----SEGI--P 378 Query: 604 YVIIVGL 610 YVI G+ Sbjct: 379 YVIYGGM 385 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 38/103 (36%), Gaps = 22/103 (21%) Query: 586 KLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRL 645 + ++ MTIH +KG + YV I G++E + EERRL Sbjct: 579 QDRLQLMTIHVAKGLEFPYVYIAGVEENLLPSSRSLDT------------AEMIEEERRL 626 Query: 646 MYVALTRARHRVWALFNKEN----------PSPFVEILKNLDV 678 +YV +TRA+ + PS F+ L Sbjct: 627 LYVGITRAQKLCTLSYTSIRTRNGKTELMIPSRFIAELPRAHY 669 >UniRef50_B0SSS8 ATP-dependent DNA helicase PcrA n=6 Tax=Leptospira RepID=B0SSS8_LEPBP Length = 678 Score = 356 bits (913), Expect = 2e-96, Method: Composition-based stats. Identities = 97/410 (23%), Positives = 155/410 (37%), Gaps = 55/410 (13%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 LN AQ AV + LLV AGAGSGKT V+ R ++ + +I+ L+F K+ Sbjct: 7 LMKLNAAQMEAVSTIQGPLLVFAGAGSGKTRVITNRIAHMVEGVKIPASKIVALSFTNKS 66 Query: 254 AEEMDERIRERLHTE---DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 A+EM ER+R+ + E IT TFH+L L I+++ K+ E F+++ Sbjct: 67 AKEMAERLRKMVPREKLKGITLSTFHSLGLKILKEHIGKLGYNETFLLFNGTDQEAFVSD 126 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 K + R + R+ + Sbjct: 127 LLK-------------------------SKRLDPKKVPPREILRRISYAKNTQVHPKD-- 159 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR---- 426 L + + A + ++ LK +NA+DF LI +L + Sbjct: 160 -----------NGLTGEFDLVAAEIFPLYEDGLKEKNAIDFDDLILLPKRLLAEFPEIAA 208 Query: 427 -FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 + ++ LVDEFQD + + L+ + + L VGDD Q+IY F G+ + L Sbjct: 209 YYQRKHEYFLVDEFQDTNQLQYEFLSLF--RGNSDNLCVVGDDDQSIYAFRGSNVQLILN 266 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQ 545 F F + L YR S I + AN IQ N G+ +K L S ++ + Sbjct: 267 FEREFPHAKVVRLLENYRSTSLIIQAANSLIQNNIGRKEKTLYSRIPSAERVEYYETADE 326 Query: 546 LDALL-------DKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 + + L + I IL R + E+ R + Sbjct: 327 REEAIFVAGRIQTLLIKNEFKGKEIAILFRTNFQSRPFEEELRNRSIPYK 376 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 71/219 (32%), Gaps = 38/219 (17%) Query: 470 QAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS 529 Q IY+F + + AF + F ++ + + I Q + + + Sbjct: 461 QEIYQF----VEMVDAFKKKFAMSQKL---------APVLR---EMITQIGFEREISMEE 504 Query: 530 LTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 KA L +L E + I + ++ ++ Sbjct: 505 TEEKVVKARIYNLSE-LVNMLSFFEEEEGREGKATIFDFLQRLVLLMEDEPKEDEEDRRV 563 Query: 590 DFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVA 649 +T+H SKG + D V +VGL+EG E RRL+YV Sbjct: 564 QLLTMHQSKGLEYDLVFLVGLEEGILPNSRVIEEEGEVVDEE-----------RRLLYVG 612 Query: 650 LTRARHRVWALFNKEN----------PSPFVEILKNLDV 678 +TR R +++ + PS F+ L V Sbjct: 613 MTRPRRKLYLTSARTRRKFGEQIESAPSRFLNELSQDAV 651 >UniRef50_A0LVT3 UvrD/REP helicase n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LVT3_ACIC1 Length = 508 Score = 355 bits (912), Expect = 3e-96, Method: Composition-based stats. Identities = 102/505 (20%), Positives = 177/505 (35%), Gaps = 79/505 (15%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 L+ Q AV + +LAG G+GKT + R + G+ P+Q+L + F +AA E Sbjct: 14 LDDDQRAAVTAMPGPVGILAGPGTGKTRTIAHRIAHAVQSGQWRPQQVLAVTFTNRAAAE 73 Query: 257 MDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCS 316 + R+R L +D++ TFHA+AL ++ ++ + A F+ + Q Sbjct: 74 LRHRLR-MLGVDDVSTGTFHAVALRQLRYFWPRLVGGAFPRI--VADKTPFLTQAAGQLG 130 Query: 317 EKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIAS 376 + + R +A+ L+ L + + Sbjct: 131 VRLSDFD-------------------------VRDVAADLEWAKVLQ-----CPPQNYPA 160 Query: 377 APEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FISPW 431 + +K A L ++ A + +DF ++ + +LE + Sbjct: 161 LARRHGRVSAKPADETAALYDRYEALKSAAHCLDFEDVLLLLVALLETEPEAVRMVRGRY 220 Query: 432 KHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFG 491 + +VDE+QD++ LL A S+T + VGD QAIY F+GA F E + Sbjct: 221 QCFVVDEYQDVNALEQRLLDAWL--GSRTEVCVVGDPRQAIYGFAGATDRYLVEFAERYP 278 Query: 492 EGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLD 551 + L YR I A+R P + + + A + Sbjct: 279 QATMVSLTRNYRSTQEILAAAHRLAGGTPLIAVRGSGVSPTVVAYPTVEAEAQGVAASVA 338 Query: 552 KLSGYAKPEERILILARYHHMRPASLEKAAT----------------RWPKLQIDFMTIH 595 +L + I +L R H + + ++H Sbjct: 339 ELISSGVSPDDIAVLVRRHALAEPISAAFDEVGIRSVRIATASRTGVPRTAGAVTIASLH 398 Query: 596 ASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARH 655 A+KG + + V + G +G A AEE+RL YV +TRAR Sbjct: 399 AAKGLEWEVVFLPGWADGILPDARALSVD-------------AVAEEQRLAYVGVTRARR 445 Query: 656 RVWALFNKE----------NPSPFV 670 + + + PS F+ Sbjct: 446 MLVVSYPRSVQRAGERVECEPSRFL 470 >UniRef50_B2A3D2 UvrD/REP helicase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A3D2_NATTJ Length = 754 Score = 355 bits (911), Expect = 3e-96, Method: Composition-based stats. Identities = 104/509 (20%), Positives = 192/509 (37%), Gaps = 52/509 (10%) Query: 112 TRTGENKWLTREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARL 171 + G++K ++ + S P D R ++ Q+ + I + Sbjct: 32 RKQGQDKHEASNTEESLKNKETNHASIFPSQYPEPPVDDEIRARFQHLQSLIDKINNQLE 91 Query: 172 -QHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARA 230 + +++ A F+ LNP Q AV LL++AGAG+GKT LV R Sbjct: 92 QEARPGDFPNNISQSASDFKINYPEELNPQQLEAVTYCNGPLLIIAGAGTGKTRTLVYRV 151 Query: 231 GWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTE---DITARTFHALALHIIQQGS 287 +LL G P++ILLL F RKAA EM ER+++ L TE I TFH+ A +++++ S Sbjct: 152 SYLLESG-IPPQEILLLTFTRKAAREMLERVKKLLGTESTDRIKGGTFHSFANNVLRRYS 210 Query: 288 KKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEK 347 V + + + R + + + ++ Sbjct: 211 GLVGLSPDFSVLDQIDSQDVVDLLRTEYDFHRQEKAFPKK-------------------- 250 Query: 348 LQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAEN 407 R+ + + + + G +E I + + +A+ + N Sbjct: 251 --ERIFEIISKSRNTQKSIGQVISEEF--------SGLDDYIDEIDTIAQAYHKYKRHYN 300 Query: 408 AVDFSGLIHQAIVILEKG-----RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTL 462 +DF L+ L + S +ILVDEFQD + + ++ L + + Sbjct: 301 LMDFDDLLLVLRDNLRDNSTFRKQLSSELSYILVDEFQDTNVVQNEIVNLL--GSQSRNI 358 Query: 463 FAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQ 522 VGDD+Q+IY F GA F +N+ + + L+ YR +++I + AN + Sbjct: 359 TVVGDDFQSIYAFRGANWENILLFPQNYPDAKLIKLEKNYRSHNKILKFANEIVDSAQIG 418 Query: 523 LKKPLNS---LTNGDKKAVTLLDESQLDALLDKL---SGYAKPEERILILARYHHMRPAS 576 +K L+S + E + +A++ ++ + + +L R Sbjct: 419 YQKHLSSEFHEGTLPQFIKYYSQEEEAEAIVSEILALREQGFSYKDMAVLYRAGFHGNYI 478 Query: 577 LEKAATRWPKLQIDFMTIHASKGQQADYV 605 + R + K + +V Sbjct: 479 QAELLRRKIPYVVYG----GIKFMERKHV 503 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 27/170 (15%) Query: 514 RFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMR 573 R I+ L+K + L SQ + L++ + + + + Sbjct: 588 RIIEYYYPILEKQEVDASERKNDLEVLYHLSQNYSELEQ------FLADLSLEPPANKFQ 641 Query: 574 PASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPP 633 + + TIH++KG + + V I L +G + R Sbjct: 642 QETTPALNEAEDDDSLVISTIHSAKGLEWNTVFIPHLLDGLFPSSKSLR----------- 690 Query: 634 VEDFPDAEERRLMYVALTRARHRVWALFNKE---------NPSPFVEILK 674 + F EERRL YVA+TRA+ +++ + PS F++ L Sbjct: 691 -DPFILEEERRLFYVAITRAKEKLYLSMPHQVVSYNGYFIQPSRFLKDLD 739 >UniRef50_Q4PDX2 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4PDX2_USTMA Length = 1176 Score = 355 bits (910), Expect = 4e-96, Method: Composition-based stats. Identities = 80/391 (20%), Positives = 157/391 (40%), Gaps = 34/391 (8%) Query: 194 SSPLNPAQARAVVNGEHSLL-VLAGAGSGKTSVLVARAGWLLAR--GEASPEQILLLAFG 250 L+P+Q A + + L +LAG GSGKT VL +R WL+ + PE IL++ F Sbjct: 43 LESLSPSQYAAATHPPTTCLQILAGPGSGKTRVLTSRVAWLILDPANKLRPEDILVVTFT 102 Query: 251 RKAAEEMDERIRERLHTEDI---TARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 KAA EM R+ + + E + TFH++ +++ + + + + + + Sbjct: 103 NKAANEMKMRLVKLIGKERVDNLVIGTFHSVCARYLRKYGRLISLSNNFSIIDSEDAKRM 162 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 + K+ + E E+ ++ + + +R Sbjct: 163 LKSILKELKAELE-----------------KENLELKPEQAMSEISKAKAKEIDPVRYRQ 205 Query: 368 GAQAEMIASAPEEIR-----DLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVIL 422 A+ E SA + + ++MA + ++ L NA+DF L+ + + Sbjct: 206 LAEQEAAKSASRKAPIGKQFTGSASFKQVMATIYIMYQKQLVDANALDFDDLLVYGVQLF 265 Query: 423 EK-GRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMS 481 + + + +H+LVDEFQD + + L+ + + ++ VGD Q+IY + A++ Sbjct: 266 RRQNQVVRNIRHVLVDEFQDTNITQYELMRLVATASQAVSI--VGDPDQSIYGWRSAEIG 323 Query: 482 LTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL 541 F ++ L+ YR I E+A R +QQ+ ++ K L + V Sbjct: 324 NLDKMTREFKGTQQARLEENYRSTGAILELALRVVQQDTSRVDKDLYTSHPRGLPVVLKS 383 Query: 542 DES---QLDALLDKLSGYAKPEERILILARY 569 S + + ++ +L + Sbjct: 384 HASAQLEAAYIASEIKRLVAHYGGVLDYNDF 414 Score = 98.9 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 13/93 (13%) Query: 573 RPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLP 632 + + K ++ T HA+KG + V I ++EG FP+ E E Sbjct: 773 DMGTESEEKDGKKKPKVTISTCHAAKGLEWPVVFIPAIEEG--CFPSFRCEKPDE----- 825 Query: 633 PVEDFPDAEERRLMYVALTRARHRVWALFNKEN 665 AEERRL+YVA+TRA ++ Sbjct: 826 ------IAEERRLLYVAMTRAESMLYLTHASYR 852 >UniRef50_C8P127 ATP-dependent DNA helicase PcrA n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P127_ERYRH Length = 715 Score = 353 bits (906), Expect = 1e-95, Method: Composition-based stats. Identities = 86/405 (21%), Positives = 149/405 (36%), Gaps = 49/405 (12%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 LN Q AV+ + V+AGAGSGKT VL R L+A P +I + F KAA Sbjct: 5 QGLNKEQKEAVLTKAKHVRVIAGAGSGKTRVLTTRIVHLIADLGYYPSKICAITFTNKAA 64 Query: 255 EEMDERIRERLHTE-DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM ER+ L + T H+L + II++ + + +V + + + E K Sbjct: 65 NEMKERMEAMLPDAIRVHTSTIHSLCVRIIREEYEALNLVRNFTILDTSDQQAVMREAYK 124 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 Q + ++S + G A+ Sbjct: 125 QFDYDRKDISF-----------------------------REALTYISNNKFAGVDVAQA 155 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RFI 428 A + + L + + L A+DF L+ + + ++ ++ Sbjct: 156 ERMAGS------NYHEQKKVNLYRFYVNRLHELFALDFDDLLLEVNRLFKENLEVRDKWR 209 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 + +LVDEFQD+ + ++ AL +Q L+ VGD Q IY + GA + F + Sbjct: 210 RRFDVVLVDEFQDVDHVQYGIVDALVGDENQ--LYVVGDPDQTIYTWRGANVDFIIDFDK 267 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL------D 542 + E E L+ YR I + AN I+ N + K L + + + Sbjct: 268 KYPESETITLNQNYRSTQHILDSANTLIKNNKDRPDKALYANKESEFPVQYATLDDGDAE 327 Query: 543 ESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKL 587 + + +L + +L R +++ A + R Sbjct: 328 AYWVANRMLELHDEGHSYLDMAVLYRSNYLSRALEKVLMARRIPY 372 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 20/99 (20%) Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647 + MT+HA+KG + + V I+GL + + +E EERRLMY Sbjct: 539 YVRLMTVHAAKGLEFENVFIMGLADNIFPNKNSIQEGS-----------GGIQEERRLMY 587 Query: 648 VALTRARHRVWAL---------FNKENPSPFVEILKNLD 677 VA+TRA+ R++ S F++ + + Sbjct: 588 VAITRAKERLFLSNNIGYNFVAGGYARASRFIKEMHLDE 626 >UniRef50_A8Q3F1 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8Q3F1_MALGO Length = 876 Score = 353 bits (905), Expect = 2e-95, Method: Composition-based stats. Identities = 83/417 (19%), Positives = 155/417 (37%), Gaps = 46/417 (11%) Query: 192 VESSPLNPAQARAVVNG-EHSLLVLAGAGSGKTSVLVARAGWLLA----RGEASPEQILL 246 + S L+ AQ AV + L +LAG GSGKT VL R WL+ R P Q ++ Sbjct: 1 MMLSGLSDAQRTAVTSDASRPLQILAGPGSGKTRVLTTRVAWLVQGAPDRKPIPPSQCVV 60 Query: 247 LAFGRKAAEEMDERIRERLHTED---ITARTFHALALHIIQQGSKKVPIVSKLENDTAAR 303 + F KAA EM R++ + E + TFHA +++ +++ + + A Sbjct: 61 VTFTNKAAAEMRSRLQALIGEERTRMLILGTFHATCARFLRRWGERIGLSRQFTIADADD 120 Query: 304 HELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLM 363 + I + A D + + R S Sbjct: 121 AKRIIKDICADFDADMAS---------------------DDVRVKPETAIAAISRAKSRC 159 Query: 364 RMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE 423 ++ + + + + + ++ L + NA+DF L+ + + Sbjct: 160 MNAVQWRSMSKYPPGTAMHEEHTY----VCRIYAEYESRLASHNALDFDDLLMYGVKLFR 215 Query: 424 KGRFIS--PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMS 481 + F+S +H+LVDEFQD + + L+ + N ++ VGD Q+IY + A +S Sbjct: 216 EHPFLSLDHIEHVLVDEFQDTNAVQYELMCHMSAGNKCVSI--VGDPDQSIYSWRHADVS 273 Query: 482 LTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAV--- 538 +F +R L+ +R I + A +QQ+ +++K L + V Sbjct: 274 HLERMRTDFPGVQRVLLEQNFRSTPSILDAALSVMQQDKLRIQKGLYTSHAQGAPVVLRA 333 Query: 539 TLLDESQLDALLDKLSGYAK------PEERILILARYHHMRPASLEKAATRWPKLQI 589 + + + ++ + + I IL R++ +I Sbjct: 334 FHDADEEARYIALEILRHVQCTGGLLTFADISILLRFNAQSRPLEAALQRHGIPYRI 390 Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 41/115 (35%), Gaps = 27/115 (23%) Query: 584 WPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEER 643 P + T HA+KG + V + ++G F + E Sbjct: 605 SPPAMVTISTCHAAKGLEWPVVFLPASEDGIYPFYRSTTPEERREERR------------ 652 Query: 644 RLMYVALTRARHRVWALFNKEN----------PSPFVEILKNL----DVPVARKP 684 L YVA+TRA+ + ++ SPF+ L + VP+ +KP Sbjct: 653 -LYYVAMTRAQTNLILSWSHRRLVMSEWSSRQLSPFLAPLVSKAHGGHVPLDKKP 706 >UniRef50_B0KVA6 Putative UvrD/REP helicase n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVA6_9BACT Length = 710 Score = 353 bits (905), Expect = 2e-95, Method: Composition-based stats. Identities = 95/422 (22%), Positives = 176/422 (41%), Gaps = 50/422 (11%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 + LN Q +AV + +LV+AGAG+GKT V+ R +L+ P++IL L F KA Sbjct: 8 KTELNEEQLKAVKHKSGPVLVVAGAGTGKTRVITERIRYLIKEKNVDPQEILALTFTEKA 67 Query: 254 AEEMDERIRER--LHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 A+EM +R+ + L E+ TFH+ A I+++ ++ I + + + L + + Sbjct: 68 AQEMVDRVGDIMPLGYEEPWVYTFHSFADRILKEKGIEIGIDPSYKILSPSDQWLLLRKN 127 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 K ++ + S + ++S ++ + Sbjct: 128 LFDLKLK-----------------------YFRPLGNPTKFISAILTFISRLQDENVSPE 164 Query: 372 EMIA--SAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR--- 426 E++ D +R + ++ + ++ +A+DF LI I +L Sbjct: 165 ELLEFVKHSNYTSDEEKQRWEELSYIYSEYERLKIESSAMDFGNLIIWVIKLLNVRPNIL 224 Query: 427 --FISPWKHILVDEFQDISPQRAALLAALRK----QNSQTTLFAVGDDWQAIYRFSGAQM 480 + + +KHILVDEFQD + + L+ L + S+ +L VGDD Q+IY+F GA + Sbjct: 225 AEYKNQFKHILVDEFQDTNYAQYELIKLLFPTKETKESERSLLVVGDDSQSIYKFRGAAV 284 Query: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQ-------LKKPLNSLTNG 533 S F E++ + + L YR I + A + IQ N + K L + +G Sbjct: 285 SNILQFMEDYKDSKMITLLKNYRSTQEILDAAYKLIQNNNPDTLESKLGISKKLIGINSG 344 Query: 534 DKKAVTLLD--ESQLDALLDKLSGY-----AKPEERILILARYHHMRPASLEKAATRWPK 586 + + E +++ ++ K+ + ILAR ++ + Sbjct: 345 SNPKILQTETLEDEVELVISKILEILAKEPQYTYKDFAILARANNHLDPFVMALRKYGLP 404 Query: 587 LQ 588 Q Sbjct: 405 YQ 406 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 58/166 (34%), Gaps = 11/166 (6%) Query: 518 QNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASL 577 Q + K + L + +D + + + ++ + A Sbjct: 511 NYLNQFLEEETIENELCIKNLNLFLQRVQKFEVDYHNETGEMPTVVNLVDYLDMIIEAGE 570 Query: 578 EKAATRWPK-LQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVED 636 A I+ MT+H+SKG + V +V L G + E L+ Sbjct: 571 NPAQAEIEDIDTINLMTVHSSKGLEFPVVFMVNLVSGRFPTRNQGDTIEVPEELIKETLP 630 Query: 637 FPDA---EERRLMYVALTRARHRVWAL----FNKEN---PSPFVEI 672 + EERRL YV +TRA+ ++ + + PS +++ Sbjct: 631 TGNEHIQEERRLFYVGMTRAQKYLFMTLGKNYGGKRDTIPSGYLQE 676 >UniRef50_C9RKG0 UvrD/REP helicase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKG0_FIBSS Length = 803 Score = 352 bits (904), Expect = 2e-95, Method: Composition-based stats. Identities = 88/415 (21%), Positives = 148/415 (35%), Gaps = 30/415 (7%) Query: 193 ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 E S L+ Q AV E + V+AGAGSGKT L R +L+ SP IL + F K Sbjct: 17 ERSRLDKEQLEAVETTEGYVRVVAGAGSGKTRTLTHRYLYLVKEMGISPANILCVTFTNK 76 Query: 253 AAEEMDERIRERLHTEDI-TARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 AA EM +RIR L +D TFH + +++ + + + + + Sbjct: 77 AAAEMKKRIRSILGGDDSGYISTFHGFCVQFLREEIHVLNYPKEFMILDEDDQKSLLRKA 136 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 K + + + LA + Sbjct: 137 YADLG---FSLKDLKISSVLDFVGGRKANDIGYVSLFAEHLADEVGA------SAAENAP 187 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----GR 426 + E + +L + + + K A+DF LI + ILE + Sbjct: 188 AVENEKREHLVELADEAPDKWMAVYYRYLYEQKKNYALDFDDLILVTLYILENFPEKLDK 247 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + +++VDE+QDI Q+ L L + LF VGD Q IY + GA ++ F Sbjct: 248 WRKRMMYVMVDEYQDIDGQQYCLADLLSSYHK--NLFVVGDPDQTIYGWRGADINRILEF 305 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD---E 543 + + L YR I +V + I+ N +++K L + G K V Sbjct: 306 DQFHKGTKTILLQNNYRSTPSILKVPDAVIKNNKYRIEKVLRPVRAGGKTPVFYHAKNTR 365 Query: 544 SQLDALLDKLSG----------YAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 + +++++ + I +L R H + E + + Sbjct: 366 EEAKWIVERIQNAVQNSVKNGAGGVHYKDIAVLYRMHSQSRSVEEALMSESIPYK 420 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 67/199 (33%), Gaps = 34/199 (17%) Query: 504 FNSRIGEVANRFIQQNPGQLKKPLNSL--------TNGDKKAVTLLDESQLDALLDK--- 552 S + E + I++ + K S T ++ DE +LD L + Sbjct: 527 SRSNVVEYV-KLIEKYRSRYKDMRVSELLSKMLRETKYEEMLRLDGDEDRLDNLAELKQG 585 Query: 553 LSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQE 612 + + E L Y K ++ MTIH +KG + YV + GL E Sbjct: 586 ILEFENYYEEDASLDEYLQNIVLFTNADEDSQEKDRVQLMTIHNAKGLEFPYVFVCGLNE 645 Query: 613 GSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWAL---------FNK 663 G + EERRL YVA TRA + + Sbjct: 646 GFFP-------------VKRVQNKMQLEEERRLAYVAFTRAENVLCLSDAEDGVAGESGS 692 Query: 664 ENPSPFVEILKNLDVPVAR 682 PS F+ + ++ VAR Sbjct: 693 RYPSRFLLEMNMDELDVAR 711 >UniRef50_A5UVF1 ATP-dependent DNA helicase, Rep family n=6 Tax=Chloroflexi (class) RepID=A5UVF1_ROSS1 Length = 659 Score = 352 bits (904), Expect = 2e-95, Method: Composition-based stats. Identities = 97/425 (22%), Positives = 156/425 (36%), Gaps = 61/425 (14%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 + LNP Q AV +LV AGAGSGKT VL R +L+ SP IL L F KAA Sbjct: 10 ASLNPEQRTAVAAPPGPILVRAGAGSGKTRVLTLRIAYLIVEHGVSPSNILALTFTNKAA 69 Query: 255 EEMDERIRERLHT--EDITARTFHALALHIIQQG-SKKVP-IVSKLENDTAARHELFIAE 310 EM +R+R+ +TA TFH++ ++++ + ++ + + Sbjct: 70 REMRQRLRDMPGVSIRGLTAGTFHSVCASVLREHIAGRIGSYTADFTIYAEDEQVHLASA 129 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 E+ L + R S + A Sbjct: 130 ALDAARERPPAL------------------------LEPEELLRHISRAKSRLLTPRLA- 164 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR---- 426 R + +A + ++ +L+ NA+DF LI + + Sbjct: 165 ----------ARFARDDLARFVAGCYQRYQRSLERANALDFDDLILLTHRLFSEHPDVLD 214 Query: 427 -FISPWKHILVDEFQDISPQRAALLAALRK----QNSQTTLFAVGDDWQAIYRFSGAQMS 481 S W+H+L+DE+QD P + AL+ L + +LFAVGD QAIY F A + Sbjct: 215 ACQSRWRHVLIDEYQDTDPAQHALVELLTRPSPANGGVRSLFAVGDGMQAIYGFRNADHT 274 Query: 482 LTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPG------QLKKPLNSLTNGDK 535 + + F +F + +L T YR I + A I+ + + KP G Sbjct: 275 IISRFERDFPDARVIELATNYRSRQPILDAAYAVIRHSRTVQPMALRATKPETPRGVGYT 334 Query: 536 KAVTLLDESQLDALLDK-------LSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 + ++D ++ L + + I +L R HM A Sbjct: 335 SPLQIVDAKDARDEAERVARSIADLLRQGRRPQEIAVLYRSRHMSRAFESALRHARIPYA 394 Query: 589 IDFMT 593 + T Sbjct: 395 LRGAT 399 Score = 111 bits (279), Expect = 7e-23, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 53/151 (35%), Gaps = 20/151 (13%) Query: 539 TLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASK 598 L E+ DA + L + + ++ TIHA+K Sbjct: 517 RLEPENVPDARAHLQELANAAADHTA-LNAFLQEVALLTSADDNDEERDRVQLSTIHAAK 575 Query: 599 GQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVW 658 G + V +VGL+EG + V EERRL YVALTRA +++ Sbjct: 576 GLEWPIVFVVGLEEGVLPHEHSL------------VTPEGVDEERRLCYVALTRAGEQLY 623 Query: 659 ALFNKEN-------PSPFVEILKNLDVPVAR 682 + PS F+ ++ AR Sbjct: 624 LSWAASRVRGKLAKPSRFLNDIEAYGRERAR 654 >UniRef50_B9XNK2 UvrD/REP helicase n=2 Tax=Verrucomicrobiales RepID=B9XNK2_9BACT Length = 692 Score = 352 bits (904), Expect = 3e-95, Method: Composition-based stats. Identities = 91/408 (22%), Positives = 154/408 (37%), Gaps = 46/408 (11%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN Q AV LV+AGAGSGKT L R G+LL +G ++ILLL F KAA Sbjct: 23 ELNEQQHAAVTAPPGPSLVIAGAGSGKTRTLTFRVGFLLEQG-IPADRILLLTFTNKAAR 81 Query: 256 EMDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM R+ + L + + TFH++ I++Q + + + + Sbjct: 82 EMMRRVSDLLGQDLPSLWGGTFHSIGNRILRQHAPLLGYQRDFSIMDREDAKDLVDACVA 141 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 + + + ++ + + LA D + +L Sbjct: 142 EAEIDVKATRFPK----ADVLADIFSLGLNTQRSIPEVLAQEYDYFENLA---------- 187 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FI 428 +A + + + K+ NA+DF L+ + +L++ + Sbjct: 188 ----------------PQIADIKERYILRKKSTNAMDFDDLLELWLKLLKEHPEVREHYQ 231 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 ++ ILVDE+QD + ++ L+ L ++ + VGDD Q+IY + GA F E Sbjct: 232 RRFQFILVDEYQDTNALQSELIDLLAARHH--NVMVVGDDAQSIYAWRGANFQNIIKFPE 289 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL------D 542 + E ++T YR I +AN I N Q +K L K V + Sbjct: 290 RYSEARVYKIETNYRSTPEILNLANAAISANVKQFEKQLTPARKSGLKPVLVPCMTASEQ 349 Query: 543 ESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQID 590 S + + +L ++ +L R H + R I Sbjct: 350 ASFVAQRMLELREEGVNMNQMAVLYRSHFHALELQLELTRRNIPFSIT 397 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 29/115 (25%), Positives = 44/115 (38%), Gaps = 24/115 (20%) Query: 577 LEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVED 636 Q+ TIH +KG + D V I+ L +G FP+A E Sbjct: 579 ETDEPANNDNEQVKLSTIHQAKGLEFDVVFIIMLCDGL--FPSARSLDTAEGEEEE---- 632 Query: 637 FPDAEERRLMYVALTRARHRVWALFN------------KENPSPFVEILKNLDVP 679 RRL+YVA+TRAR+ ++ + + PS F+ L + Sbjct: 633 ------RRLLYVAITRARNELYLSYPLIRMMPGGSGDAMQQPSRFLSELPKESLD 681 >UniRef50_B2S4R5 DNA helicase II n=3 Tax=Treponema RepID=B2S4R5_TREPS Length = 670 Score = 352 bits (903), Expect = 3e-95, Method: Composition-based stats. Identities = 92/408 (22%), Positives = 152/408 (37%), Gaps = 43/408 (10%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 S LN AQ +AV + LL+LAGAGSGKT V+ + L+ + PEQIL + F KA Sbjct: 5 LSALNEAQRQAVCHYGSPLLILAGAGSGKTRVITTKIAHLIRSRQVRPEQILAVTFTNKA 64 Query: 254 AEEMDERIRER-LHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 A EM R + T TFHAL + I+++ + ++ + + + Sbjct: 65 AREMRTRACALESAAQGATICTFHALGVWILRRYAVRLGLNPHFSIYDDHDVRALLPKIL 124 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 C + LA + + ++ Sbjct: 125 PHCDHSR-----------------------------AGMLARGISQAKDYGLDCASFESV 155 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RF 427 + + A + ++ VDF LI + +L + + Sbjct: 156 HARVSAPACAARAVLGDRQFAHAYACYHRRMREMGTVDFGDLIMLPVQLLREHQDVAEQL 215 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + W+ ++VDE+QD + + L L + T L VGDD Q+IYRF GA++ F Sbjct: 216 HARWQVVMVDEYQDSNVAQFHFLQVLTGAH--TYLCVVGDDDQSIYRFRGAEVKNILTFP 273 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLD 547 E F + L+ YR I VA+ +++N +L K L + G K L +Q + Sbjct: 274 EFFQNTQIIRLEYNYRSTDAILRVADSVVKKNQDRLGKALIAQRTGGTKPRLFLLNNQDE 333 Query: 548 AL------LDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + + P IL R + + + +I Sbjct: 334 EAALCVHLIQEARARGIPYADWAILYRVNAQSLSFEQCFLRNRIPYRI 381 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 48/148 (32%), Gaps = 26/148 (17%) Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQAD 603 + + ++ + L + A + +TIH +KG + Sbjct: 533 QCAVNVQELMNAASLYACSHEGLVSFLEHIQLDQNMADEGGAADAVHLITIHNTKGLEFR 592 Query: 604 YVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNK 663 VI+ GL+ G ++ EERRLMYVA TRA ++ Sbjct: 593 RVILTGLENGVFP----------------RDDEADIQEERRLMYVACTRAMDSLYLTACA 636 Query: 664 EN----------PSPFVEILKNLDVPVA 681 PS F+ L + + + Sbjct: 637 YRRMWGRHTAMKPSRFLTELDSALLEIT 664 >UniRef50_UPI0000E87DAA UvrD/REP helicase n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87DAA Length = 725 Score = 351 bits (902), Expect = 4e-95, Method: Composition-based stats. Identities = 99/412 (24%), Positives = 158/412 (38%), Gaps = 53/412 (12%) Query: 190 RQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAF 249 + + LN Q AV + S L+LAGAGSGKT VL +R WL+ ASP IL + F Sbjct: 9 NKQQGQELNLKQQEAVTLSDQSALILAGAGSGKTKVLTSRFAWLIQNQIASPGGILAVTF 68 Query: 250 GRKAAEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELF 307 KAA+EM RI +L + TFH L +++ + + + +A + Sbjct: 69 TNKAAKEMLVRISAQLPINPRGMWVGTFHGLCNRFLKKHYQDASLPQIFQILDSADQKSA 128 Query: 308 IAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHG 367 I K+ + + + + +++ + G Sbjct: 129 IKRVMKKMNIDEDFLP-----------------------------SKEVLYFINGNKEEG 159 Query: 368 GAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE---- 423 A F + + KA++ E VDF+ L+ + + + + Sbjct: 160 VRSNAYKA---------FDDISEKKNAIYKAYEDQCLKEGVVDFAELLLRCLELFQNKPM 210 Query: 424 -KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 + + S +KHILVDEFQD S + L L +NS +FAVGDD Q+IY F GA+ Sbjct: 211 IREHYQSIFKHILVDEFQDTSKLQYEWLKLLTAKNSF--IFAVGDDDQSIYGFRGARPGN 268 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL-- 540 ++F L+ YR + I AN I+ N +L K L S Sbjct: 269 MKDLQKDFKINNIIKLEQNYRSKNNILNAANAIIENNADRLGKNLWSEAGDGDLIRQYNA 328 Query: 541 ----LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 + S + + L ++I IL R + + + Sbjct: 329 LDDRFETSYILDEIKGLHRSGSRYDQIAILYRNNAQSRVIEMAMVSNNIPYR 380 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 37/166 (22%), Positives = 65/166 (39%), Gaps = 22/166 (13%) Query: 529 SLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 S + + ++ ++ ++ + + + IL+ + + Sbjct: 501 SSRIENLDELVSAAKAYINEFREENTENESGDSKASILSDFLDFTSLESGELQASAGDDA 560 Query: 589 IDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYV 648 + MTIH+SKG + D V I GL+EG + E+ EERRLMYV Sbjct: 561 LQLMTIHSSKGLEFDTVFITGLEEGLCPHERSLSENN------------GLEEERRLMYV 608 Query: 649 ALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVARKP 684 A+TRAR +++ + PS F++ + N V P Sbjct: 609 AVTRARQKLYLTLAQSRLTYGQTMYNLPSRFLDEIPNELVKRINAP 654 >UniRef50_UPI0001C42BC3 ATP-dependent DNA helicase n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42BC3 Length = 785 Score = 351 bits (901), Expect = 4e-95, Method: Composition-based stats. Identities = 110/553 (19%), Positives = 200/553 (36%), Gaps = 70/553 (12%) Query: 64 EKVVRLHGTEWGETQRFYHH-LDAHWRRWSGEMSEIASGVLRQQLDLIATRTGEN----- 117 +KV++L E + Q+ Y+ + + + I T + Sbjct: 8 QKVIQLSSIERSQWQQMYNASIRQELTCMHCGEPLRIYIGIHEAPFFIHPPTSLDCLKEV 67 Query: 118 -KWLTREQTSGVQQQIRQALSALPLPVNR-LEEFDNCREAWRKCQAW--LKDIESARLQH 173 + Q + +L+ +PV R + N A + + +K I + H Sbjct: 68 AAYERESQKKQSDRTETSSLNGFKMPVRREISSSGNESSATDQWKPPEPIKAIPTFTAHH 127 Query: 174 NQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWL 233 + T Y ++ + L+ Q A E LL+LAGAGSGKT VL RA ++ Sbjct: 128 KSGH--EEYTGYRAILKE-QGISLDDQQWNAATTTEGPLLILAGAGSGKTRVLTTRAAYM 184 Query: 234 LARGEASPEQILLLAFGRKAAEEMDERIRERLHT-----EDITARTFHALALHIIQQGSK 288 L SP+Q++L+ F KAA+EM ER+ + + TFH++ ++ Sbjct: 185 LTEKNYSPKQMILVTFTAKAAKEMKERMTIYPGVTKGALQQLVVGTFHSIFYRMLMHYDF 244 Query: 289 KVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKL 348 + L +W+K K+A + + + E Sbjct: 245 EK----------WNSQHLLKWDWQKDQILKEAGREI----------------DLDEKEFA 278 Query: 349 QRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENA 408 + +++ W + M+ + + + A L K ++ ++ Sbjct: 279 YDQALTQISWWKNHMQNPNEIKPK-------------DIWEERAAYLYKRYEQMRTSKRL 325 Query: 409 VDFSGLIHQAIVILEKG-----RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLF 463 DF ++ +L R+ + ++ +DEFQDI+ + L+ L + + L Sbjct: 326 FDFDDMLLGCYDLLTTNQALLERYQERFAYVSIDEFQDINKVQVELITLLTET--KRNLC 383 Query: 464 AVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQL 523 VGDD Q+IY F G+ F ++ E + C LD YR I E AN I N + Sbjct: 384 VVGDDDQSIYAFRGSDPDYILNFKSDYPEAKVCVLDQNYRSTHPIVESANNVITTNKTRF 443 Query: 524 KKPLNSLTNGDKKAVTLLDESQLDA------LLDKLSGYAKPEERILILARYHHMRPASL 577 K L++ + V + + + +L R + A Sbjct: 444 NKQLHAQHTDENAPVLFFPYDEEEEATMIVNDIKSRIKNGAEPSDFAVLFRTNVTSRALF 503 Query: 578 EKAATRWPKLQID 590 E+ T + I+ Sbjct: 504 ERMVTSSLPISIE 516 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 36/132 (27%), Positives = 51/132 (38%), Gaps = 13/132 (9%) Query: 551 DKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGL 610 D + E + HM E K + +TIH +KG + +V I+G Sbjct: 644 DLKVAARQHETIEAFIQHVDHMIAKQEEARKMPAEKTAVQLLTIHRAKGLEYKHVYILGA 703 Query: 611 QEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENP---- 666 EGS A +D P EERRLMYVA+TRA++ + Sbjct: 704 NEGSLPHDYALDAWR-------EGDDKPLEEERRLMYVAMTRAKNTLAISVPTMRRGKRA 756 Query: 667 --SPFVEILKNL 676 S FV +K + Sbjct: 757 HSSRFVREVKKM 768 >UniRef50_B3DUG1 ATP-dependent DNA helicase UvrD/PcrA n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DUG1_METI4 Length = 636 Score = 351 bits (901), Expect = 5e-95, Method: Composition-based stats. Identities = 88/410 (21%), Positives = 154/410 (37%), Gaps = 48/410 (11%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN Q +AV +LV+AGAGSGKT L R +L+ +G +P +ILL F KAA Sbjct: 7 ELNEEQKKAVTAPLGPILVIAGAGSGKTRTLTYRVAYLIEKG-INPGRILLATFTNKAAR 65 Query: 256 EMDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 EM R+ ++T+ I TFH L I++ +K + + + Sbjct: 66 EMLNRVDRLVNTDTSQIWGGTFHHLCHKILRNHAKTIGFEQNFTIIDREDSIQLLTGCIE 125 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 + + K+ F E L + +++ + + Sbjct: 126 ELNLKRG------------------NKLFPSPEALLEVFSLVVNKVKPIWKTL------- 160 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FI 428 EE + + L ++ K D+ L+ + + ++ + Sbjct: 161 -----EESFSHLAIFSDEITKLEYFYRERKKKLLVFDYDDLLFYTVKLFQEKENILKFYQ 215 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 S +++ILVDE+QD S +A + L S + VGDD Q+IY + GA++ F + Sbjct: 216 SYFEYILVDEYQDTSRIQADFIDLL--GQSSQRVMVVGDDAQSIYSWRGAEIENMLNFPK 273 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAV--------TL 540 + ++ T YR I +AN I+ N Q K L + ++ T Sbjct: 274 RYPSTVVINIKTNYRSTPEILALANAAIEGNQFQFPKELRAARKSLQEIKPQLLLCYSTA 333 Query: 541 LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQID 590 + + ++ + + IL R H + R +I Sbjct: 334 VQSQVIAEFIEDFRKQGIEAKEMAILYRAHFHALEMQLELTRRKIPFEIT 383 Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 52/170 (30%), Gaps = 22/170 (12%) Query: 519 NPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLE 578 Q K L + +G + L+ + + Sbjct: 470 YAHQPSKQLERILHGVYADHLKMLYECYQRRLEDIEELINFASLYNSTEDFLAQISLLTG 529 Query: 579 KAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFP 638 + + + TIH +KG + V I+ L EG + + Sbjct: 530 VDTVQEQRGGVRLSTIHQAKGLEWKVVFIIMLCEGLFPSNYSLNHPTL------------ 577 Query: 639 DAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDV 678 EERRL YVA TRA+ R++ + PS F+E L V Sbjct: 578 LEEERRLFYVAATRAKDRLFLCYPARRSFNNRQSTYFPSRFLEELPKHLV 627 >UniRef50_Q8EUN0 ATP-dependent DNA helicase n=1 Tax=Mycoplasma penetrans RepID=Q8EUN0_MYCPE Length = 738 Score = 351 bits (900), Expect = 7e-95, Method: Composition-based stats. Identities = 97/410 (23%), Positives = 166/410 (40%), Gaps = 45/410 (10%) Query: 196 PLNPAQARAVVNGEH-SLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 N Q A+ + L+V+AGAGSGKT+VL RA +LL ++IL F KAA Sbjct: 8 SFNEKQYEAITAPDDVPLMVIAGAGSGKTAVLTYRAVYLLNELNYVSDRILGFTFTNKAA 67 Query: 255 EEMDERIRERLHTEDI-TARTFHALALHIIQQGSKKVP---IVSKLENDTAARHELFIAE 310 EM +RI + + TFH++ L I+++ K++ I S + E Sbjct: 68 NEMKDRITKVIPNRSFKYIGTFHSVCLRILREDIKELNIGKINSNFTIIDEDDQNSILKE 127 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 K NF + S + + S Sbjct: 128 IYK-------------------------LNNFDKQILNYKVCLSWISKLKSDNIYDANDV 162 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE----KGR 426 E ++ + + A + + + L+ N +DF LI A +LE + + Sbjct: 163 YEWLSFLDNTY--DGKVKKDIFAAVYEGYINFLRDGNLLDFDDLIKYARRVLEIEEIRTK 220 Query: 427 FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + + + +ILVDEFQD + + ++ L K +FAVGD Q IY + GAQ ++ F Sbjct: 221 WQNRFDYILVDEFQDTNYDQYQIIKLLSKN--FKNIFAVGDPDQMIYSWRGAQENIFEVF 278 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQL 546 ++F + L+ YR I +AN IQ+N ++KK L + ++ + + + + Q Sbjct: 279 KKDFSDSLTIVLEKNYRSTKNILNIANSLIQKNKNRIKKNLYTDSSTESEIIYFEADDQN 338 Query: 547 DA-------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + D + + I IL R +++ E + +I Sbjct: 339 LESKFVCTRIKDLVDSKKYNYKDIAILYRANYLSRNIEEFLSNYRIPYRI 388 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 57/154 (37%), Gaps = 30/154 (19%) Query: 543 ESQLDALLDKLSGYAKPEER------ILILARYHHMRPASLEKAATRWPKLQIDFMTIHA 596 E + +L +K E+ I + + ++ E+ + + + MT+HA Sbjct: 509 EEHRTENIIELKNASKNFEQNNPGSNINFYLQELALLTSNDEEENQKNKQDSVSLMTVHA 568 Query: 597 SKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHR 656 SKG + V I+ E + E + EERR+ YVA+TRA+ Sbjct: 569 SKGLEFKIVFIIQFNENIFPSIRSLEEGNL-------------DEERRIAYVAITRAKEN 615 Query: 657 VWALFN-----------KENPSPFVEILKNLDVP 679 ++ + PS F+ + + + Sbjct: 616 LYISCCNGTSFFGNREMEREPSRFISEIGDALIE 649 >UniRef50_Q67LG5 ATP-dependent DNA helicase n=1 Tax=Symbiobacterium thermophilum RepID=Q67LG5_SYMTH Length = 671 Score = 349 bits (895), Expect = 2e-94, Method: Composition-based stats. Identities = 92/416 (22%), Positives = 151/416 (36%), Gaps = 51/416 (12%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNPAQ A ++ + LLV+AGAG+GKT R LLARG PE ++ + F KAA Sbjct: 10 GLNPAQRAAALHQDGPLLVIAGAGAGKTRTATHRLACLLARG-VPPEAVMCITFTNKAAR 68 Query: 256 EMDERIRERLHT--EDITARTFHALALHIIQQGS---KKVPIVSKLENDTAARHELFIAE 310 EM +R + + RTFH+ A+ +++Q + + E Sbjct: 69 EMRDRAVALVGADARRVMIRTFHSAAMVLLRQYIGDFPESGRTPSFTVADPTIQLALLKE 128 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 + + + R+ R+ + + Sbjct: 129 AIAERNFDLKANR-------------------------PESFLWRIGRYKNELADPESLL 163 Query: 371 AEMIASAP-------EEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE 423 A + E IR +L A + K ++ L+ + VDF LI+ + +L Sbjct: 164 ARQPSHDLMDWSRVLEMIRSTDRYVNRLTAEIWKRYEEKLRRNDMVDFDDLINLFVQMLR 223 Query: 424 KGR-----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGA 478 + + ++ VDEFQD + + ++ L + + + AVGDD Q+IY + A Sbjct: 224 EKPDIRADLQRRFTYLQVDEFQDTNVAQLHMVKLLAGK--RQNVMAVGDDAQSIYSWRSA 281 Query: 479 QMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAV 538 + F +F L+ YR I ANR I N GQ K L + + V Sbjct: 282 DIRCILEFERHFPGARTILLEQNYRSTGAIIRAANRLIAHNAGQRPKRLFTAAPEGRPVV 341 Query: 539 TLLDES------QLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 E+ + + + + IL R E+ Q Sbjct: 342 AHEAETEVDEAKWVVQRIRAGAEAGRRWGDFAILYRTTAQGRPFEEELREASIPYQ 397 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 23/111 (20%) Query: 572 MRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALL 631 A LE + TIH++KG + V +VG+++G + A E + Sbjct: 557 DHLALLEGQEDESGGDVVKLQTIHSAKGLEYPVVFVVGMEQGLLPYQRALEEGNL----- 611 Query: 632 PPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEI 672 EERRL YVA+TRAR ++ + PS F+ Sbjct: 612 --------EEERRLCYVAITRAREELYLTGARVRWQRGEMVLTTPSQFLSE 654 >UniRef50_C5BBB0 ATP-dependent DNA helicase Rep, putative n=2 Tax=Edwardsiella RepID=C5BBB0_EDWI9 Length = 726 Score = 348 bits (894), Expect = 3e-94, Method: Composition-based stats. Identities = 95/412 (23%), Positives = 151/412 (36%), Gaps = 54/412 (13%) Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256 LNP Q +AV LVLAGAGSGKT V+ + L+ I + F KAA E Sbjct: 54 LNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRVCGYQARHIAAVTFTNKAARE 113 Query: 257 MDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 M ER+ + L + TFH L L II++ K + + S + + + Sbjct: 114 MKERVAQTLGRKEARGLMISTFHTLGLEIIKREYKALGMKSNFSLFDDQDQLALLTDLTE 173 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 + EK D+ ++L + + W + + A Sbjct: 174 RWLEK--------------------------DKTQLQQLIATISNWKNDLIDPAQA---- 203 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FI 428 S R +L A + LK+ N +DF LI ++L + + Sbjct: 204 -------AAQARSARERLFADCYGLYDTQLKSCNVLDFDDLILLPTLLLRRDPEVRERWQ 256 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 +++LVDE+QD + + L+ L S+ VGDD Q+IY + GA+ E Sbjct: 257 QRIRYLLVDEYQDTNTSQYELVKLLV--GSRARFTVVGDDDQSIYSWRGARPQNLVLLKE 314 Query: 489 NFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDA 548 +F + L+ YR + RI + AN I NP +K L S + + ++ Sbjct: 315 DFPALQVVKLEQNYRSSQRILKAANILIANNPHVFEKRLFSELGYGEPLKVITANNEDHE 374 Query: 549 LLDKLSGYAKP-------EERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 + IL R +H + +I T Sbjct: 375 AERVVGELIAHHFIHKTAYSDYAILYRGNHQSRVFEKMLMQNRIPYKISGGT 426 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 37/146 (25%), Positives = 56/146 (38%), Gaps = 23/146 (15%) Query: 548 ALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVII 607 + D L G E L +E+ + Q+ MT+HASKG + YV + Sbjct: 562 WMTDMLQGSDLDEPMTLTQVVNRFTLRDMMERGESEEEADQVQLMTLHASKGLEFPYVYL 621 Query: 608 VGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN-- 665 VG++EG ++ E + EERRL YV +TRA+ + +E Sbjct: 622 VGMEEGLLPHQSSIDEDNV-------------DEERRLAYVGITRAQKALVFTLCRERRQ 668 Query: 666 --------PSPFVEILKNLDVPVARK 683 PS F+ L D+ Sbjct: 669 YGELMRPEPSRFLLELPQDDLSWESA 694 >UniRef50_Q5WF16 UvrD/REP family ATP-dependent DNA helicase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WF16_BACSK Length = 763 Score = 348 bits (894), Expect = 3e-94, Method: Composition-based stats. Identities = 110/509 (21%), Positives = 195/509 (38%), Gaps = 71/509 (13%) Query: 103 LRQQLDLIATRTGENKWLTREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAW 162 + Q+ I +G+N+ REQ +Q RQA S R AW Sbjct: 55 IHQKPSFIHPPSGDNR--CREQVEAF-EQARQAESQTAATTAHGFRLPQRRAVLNTTPAW 111 Query: 163 -----LKDIESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAG 217 L ++ + + + Y + + + L+ AQ +AV + + LL+LAG Sbjct: 112 KAPLVLSNVAPFTVPASTKQMA--MEGYREQLTKAGLT-LDDAQWKAVKHIDGPLLLLAG 168 Query: 218 AGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDIT-----A 272 AG GKT VL ARA ++++ P ++ L+ F KAA+EM ER+ E E + Sbjct: 169 AGCGKTRVLTARAAYMISEANIHPNKMALVTFTAKAAQEMRERMTEYPGIEPMFAQSLLI 228 Query: 273 RTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEE 332 RTFH+L ++ K + E Sbjct: 229 RTFHSLFYTMLVHADP-----------------------------SKWHGSKLIKSGQEL 259 Query: 333 MQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLM 392 ++ + E + A+++ W + M E + + Sbjct: 260 LKTQGRALGLDESEFPYDQAATQISWWKNHMIAP-------------EHVETTDPFEEKA 306 Query: 393 APLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RFISPWKHILVDEFQDISPQRA 447 A L + ++ AL+ DF + + +L++ R+ + ++L+DEFQDI+P + Sbjct: 307 ALLYEHYEKALRETGRFDFDDMQLGCLYVLQENNRLLQRYQERFAYLLIDEFQDINPVQF 366 Query: 448 ALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSR 507 ++ L Q + VGDD Q+IYRF G+ +F ++ E + L YR + Sbjct: 367 EIVKLLAM--PQRNICVVGDDDQSIYRFRGSDPRFIRSFTAHYPEAKTIHLVENYRSSHP 424 Query: 508 IGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL------DESQLDALLDKLSGYAKPEE 561 I ANR I +N +L+K L + D+ + + + + +L G Sbjct: 425 IIASANRVIAENRTRLEKTLVAQHTSDQLPYLFFPYNEEEEATMIVEEIKRLIGKGICPS 484 Query: 562 RILILARYHHMRPASLEKAATRWPKLQID 590 I +L R A +++ ++ Sbjct: 485 EIAVLYRTSTSVRALVDRLVDTTLPFSLE 513 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 33/113 (29%), Positives = 47/113 (41%), Gaps = 13/113 (11%) Query: 564 LILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARE 623 ++ H + + I +TIH SKG + +V IVG EGS A Sbjct: 655 FLIHIDHVIAKQQECQTFQTRHPKSIQLLTIHRSKGLEFSHVFIVGAVEGSLPHDYALDA 714 Query: 624 SIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFN------KENPSPFV 670 +D P EERRLMYVA+TRA+ + + +P+ FV Sbjct: 715 WR-------EGDDGPLQEERRLMYVAMTRAKKELAISAPVHYRGKRAHPTRFV 760 >UniRef50_A7Z3H2 YjcD n=3 Tax=Bacillus RepID=A7Z3H2_BACA2 Length = 761 Score = 348 bits (894), Expect = 3e-94, Method: Composition-based stats. Identities = 94/511 (18%), Positives = 175/511 (34%), Gaps = 68/511 (13%) Query: 106 QLDLIATRTGENKWLTREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKD 165 L+ A + T + + ++ + + + + + + Sbjct: 48 ILEQPAFYHRQKGDFTACEKACAAEEPQAEKEKEEYKEAGMFRLPKGKAISENPKPIVSE 107 Query: 166 IESARL-QHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTS 224 +S + + ++ F + LN Q +AV + LLVLAGAGSGKT Sbjct: 108 WKSPKKVPAAEPFSPTSEAADTSLFPGI---GLNREQMKAVTETDGPLLVLAGAGSGKTR 164 Query: 225 VLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLH-----TEDITARTFHALA 279 VL ARA ++ SPE +LL+ F KA EM ER+ + TFH+ Sbjct: 165 VLTARAAHMIEHLGISPENMLLVTFTTKAVAEMKERMANEYGLAAGKVSRLVTGTFHSFF 224 Query: 280 LHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPE 339 I+ S+L + + ++ Sbjct: 225 YKILYHYDSSKWNGSQLLKMEWQKEQYVKKALYEE------------------------- 259 Query: 340 GNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAW 399 N + E + + W + P E L K + L + + Sbjct: 260 -NLDEKEFPVDQALQLIGCWKN-------------TYLPHETIPLADDWEKKVYRLYEHY 305 Query: 400 KGALKAENAVDFSGLIHQAIVILEKGR-----FISPWKHILVDEFQDISPQRAALLAALR 454 + + + DF + + + + + + HIL+DEFQDI+P + ++ + Sbjct: 306 ERQKREKRQFDFDDMAQGCYELFQSRPDILAQYQNRFSHILIDEFQDINPVQYNIMQMIA 365 Query: 455 KQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANR 514 + L VGDD Q+IY F G+ S F +++ + L YR I A+ Sbjct: 366 S--PENNLCCVGDDDQSIYAFRGSSPSFILDFQKDYPAAKTIYLTANYRSPHPIVSSAHA 423 Query: 515 FIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDA------LLDKLSGYAKPEERILILAR 568 +++N + +K L+++ +G V + + + + + +L R Sbjct: 424 VVKKNKKRYEKTLSAVKDGVHNPVMFYPYDEEEEATMIVSDMKEKIQNGASPDDFAVLYR 483 Query: 569 YHHMRPASLEKAATRWPKLQIDFMTIHASKG 599 + A E+ HA +G Sbjct: 484 TNSAGRAIYERLHQSSIPY-------HADRG 507 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 13/97 (13%) Query: 583 RWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEE 642 + + ++ +TIH SKG + + V I+G +GS A + P EE Sbjct: 661 KTDENGVELLTIHRSKGLEFNTVYILGAADGSIPHDFALET-------ARQGDPAPLEEE 713 Query: 643 RRLMYVALTRARHRVWALFNKENP------SPFVEIL 673 RRL+YVA+TRA ++ S F+E L Sbjct: 714 RRLLYVAMTRAMQHLYVSCPAYRRGKTARSSRFLEPL 750 >UniRef50_Q018Z5 ATP-dependent DNA helicase (ISS) n=1 Tax=Ostreococcus tauri RepID=Q018Z5_OSTTA Length = 859 Score = 348 bits (894), Expect = 3e-94, Method: Composition-based stats. Identities = 95/429 (22%), Positives = 175/429 (40%), Gaps = 48/429 (11%) Query: 186 ADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQIL 245 A+ V LN AQ AV+ + VLAG GSGKT VL+ R L+ + P +IL Sbjct: 62 AEALEPVHVRGLNDAQRAAVLAPVGATRVLAGPGSGKTHVLIGRVAHLIHEEKTPPREIL 121 Query: 246 LLAFGRKAAEEMDERIRERLH---TEDITARTFHALALHIIQQGSKK---VPIVSKLEND 299 + F KAA+E+ ER+R+++ ++ITA TFH++A ++++ ++ + + Sbjct: 122 CITFTNKAAKELRERLRDKIGEVAAKEITAGTFHSVAARMLRRHGERIPGIGRTGEFTIY 181 Query: 300 TAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRW 359 A + + V + + + + Sbjct: 182 DADDSKQIVQSVL------------------------VNKFGESKKTAQPGPMRNWISTA 217 Query: 360 VSLMRMH-GGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQA 418 S ++ G ++M+ + + + + + L ++ L+ NA DF L+ Sbjct: 218 KSCVKHSVGLRGSQMLRALEDAKKPIPPMSQQRFVELYDEYEDGLRQANAFDFDDLLSAT 277 Query: 419 IVILE-----KGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIY 473 + +LE + + W +LVDEFQD S + L+ L + Q ++F VGD QAIY Sbjct: 278 VAMLEMCPDVRAYYERRWSQVLVDEFQDTSTTQYELIRKLSQ--PQGSVFVVGDADQAIY 335 Query: 474 RFSGAQMSLTT-AFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTN 532 + GA+++ F ++F E + L T YR S I E A I+++ L + T Sbjct: 336 GWRGAEVANIRTQFDQDFKEVQTHMLTTNYRSTSTIVEAAQAVIKESSFPSPLDLVAHTP 395 Query: 533 GDKKAVTLLDESQLDALLDKLSGYAK--------PEERILILARYHHMRPASLEKAATRW 584 + V +++ + + ++ A+ + +L R + E Sbjct: 396 -GGRDVAIVEANDDREEAEFIALEARKLVQDSDLRYSDVAVLYRTNSQARVLEEAFIRAG 454 Query: 585 PKLQIDFMT 593 + T Sbjct: 455 VPHTVVGDT 463 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 13/83 (15%) Query: 587 LQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLM 646 + MT+HASKG + D V I G+++G F + D EE RL Sbjct: 660 DKAKLMTMHASKGLEFDTVFIAGVEDGLIPF------------IRNGDSDDDQDEEVRLF 707 Query: 647 YVALTRARHRVWALFNKENPSPF 669 YV +TRA+ ++ +E F Sbjct: 708 YVGITRAKRKLMLCHARERR-RF 729 >UniRef50_C6XGC2 DNA helicase II n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XGC2_LIBAP Length = 685 Score = 348 bits (892), Expect = 5e-94, Method: Composition-based stats. Identities = 88/411 (21%), Positives = 152/411 (36%), Gaps = 52/411 (12%) Query: 194 SSPLNPAQARAVVNGEH-SLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 LN Q AV + LL+LAGAG+GKT+VL+AR L+ E P +IL + F + Sbjct: 27 LKGLNAQQTHAVTIPDDTPLLILAGAGTGKTTVLIARMLHLICHKEIPPSKILAMTFTNQ 86 Query: 253 AAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 A +EM R+ L + +TFH+ I+++ + V + + +A I + Sbjct: 87 AIQEMKNRLACYLGEKIPRIQTFHSFCASILRKHGEVVGLPTDFAILDSAESRTIIKQLL 146 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 K D + + ++D W + Sbjct: 147 KDLQID-------------------------DKDYDPHEVIEKIDYWQNRGWNPKDIPQS 181 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWK 432 + E + + + L+ + DF GLI + I +L + + Sbjct: 182 SLTEDAEIPKA-----------IYIQYVAYLQKTKSCDFGGLIIKTIEVLHHPHVLKKYH 230 Query: 433 ----HILVDEFQDISPQRAALLAALRKQNSQT---TLFAVGDDWQAIYRFSGAQMSLTTA 485 +I+VDE+QDI+ + LL L ++ + VGD+ Q IY + GAQ S Sbjct: 231 EKIPYIMVDEYQDINTPQYLLLRLLCQKEDSKQGARICCVGDENQCIYEWRGAQFSHILN 290 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL---- 541 F ++F + L+ YR + I AN+ I N + K L + + A + Sbjct: 291 FQKDFKDANIIKLEQNYRSTTHILNTANKLISHNKQRFDKKLFTQRDCHDDAKVSIHVSQ 350 Query: 542 ----DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 + S + + + I IL R + + + Sbjct: 351 SDNSELSTIIQEIINIQNTGMSLNNIAILVRTSWQTRKFEDAFLEQEIPHK 401 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 48/146 (32%), Gaps = 28/146 (19%) Query: 547 DALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVI 606 LD L E+ L + P + I MT+HA+KG + D V Sbjct: 529 QERLDNLRELLSIIEKHETLEGFVLQAPLRENLGSFIPDSNCIQIMTLHAAKGLEFDTVF 588 Query: 607 IVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFN---- 662 I G ++G + E +E ERRL YV +TRA+ + + Sbjct: 589 ISGWEQGLLPHQLSINEGNVEG-------------ERRLAYVGITRAKKKCHLFYTINRR 635 Query: 663 -----------KENPSPFVEILKNLD 677 S F+ L + Sbjct: 636 THDFTRVERYQPSQVSQFLLELYDPS 661 >UniRef50_Q6MND7 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MND7_BDEBA Length = 672 Score = 347 bits (891), Expect = 7e-94, Method: Composition-based stats. Identities = 91/414 (21%), Positives = 160/414 (38%), Gaps = 56/414 (13%) Query: 195 SPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAA 254 LNP Q +AV + LL+LAGAGSGKT+VLV+R G L++ A ++I +L F KAA Sbjct: 5 KGLNPEQQKAVKHNFGPLLILAGAGSGKTTVLVSRTGRLISERVAQAQEICVLTFTNKAA 64 Query: 255 EEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 E+ R+ +L + A TFH+ L I+++ K + + + + Sbjct: 65 RELKHRVGAKLGSSGSGMWAGTFHSFGLQILRRFHKHAGLSPYFGIVDQSDCNAIVKDLI 124 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 K A ++ ++ R Q E Sbjct: 125 KDIKNSGKDKFD----------------------------ADKILNMINDRRTGMAPQTE 156 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----F 427 F + +++ L + L+ VDF GL+ + I + ++ Sbjct: 157 A-----------FDEYHEMVEVLTPKFTKRLEHLGVVDFEGLLIKPITLFKENPEILEKV 205 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + ++VDEFQD + + L+A + K + + VGDD Q+IY + GA++ F Sbjct: 206 QGMFTQVMVDEFQDTNRLQMDLIAQIVKSH--NNIAVVGDDDQSIYGWRGAEVKNILNFP 263 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS-----LTNGDKKAVTLLD 542 + F E L+ YR ++ I VAN I +N + K L + + + Sbjct: 264 QEFTPCEVIKLERNYRSSAEILAVANAAISKNKNRHGKILRPQVAEDTGQLPELFILDRE 323 Query: 543 ESQLDALLDKL---SGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 E + + ++ ++ + + +L R + I T Sbjct: 324 EDECEFVVTEILNFQRQGYSYKDMAVLYRSNTQGGLIESSLRRANVPYHISGGT 377 Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 54/155 (34%), Gaps = 29/155 (18%) Query: 544 SQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWP-KLQIDFMTIHASKGQQA 602 + +L ++ + + L + + ++ MT+HASKG + Sbjct: 507 WMVVEILGRILDSFLGRRSYDVENIKSFVDCMLLRDDLSEEELENKVQLMTLHASKGLEF 566 Query: 603 DYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFN 662 VI+ GL+E + EERRL YV +TRA+ R+ Sbjct: 567 PVVILAGLEEDLLPHKNLGSD---------------IDEERRLFYVGVTRAKKRLVMSRC 611 Query: 663 KEN----------PSPFVEILKNLDV---PVARKP 684 ++ PS F+ L P+ +P Sbjct: 612 QQRKKNGAVRPVAPSRFLLELPKELYTEFPLGARP 646 >UniRef50_D1B9M8 UvrD/REP helicase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9M8_THEAS Length = 653 Score = 347 bits (891), Expect = 7e-94, Method: Composition-based stats. Identities = 99/411 (24%), Positives = 165/411 (40%), Gaps = 62/411 (15%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 LNP Q AV + + L+LAGAGSGKT VL + +L++ SP +IL + F KA Sbjct: 10 LDGLNPKQVEAVTYCDGNQLILAGAGSGKTRVLTRKIAYLISHKGVSPSKILAVTFTNKA 69 Query: 254 AEEMDERIRERLHTE--DITARTFHALALHIIQQGSK---KVPIVSKLENDTAARHELFI 308 A EM +R+ L I TFH+ L+ +++ + ++ + L + + + Sbjct: 70 AGEMRQRVERLLGGSLHGIRICTFHSYGLNFLRRNEEIMRRMGYATPLVVIDRSDQKRLL 129 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 K+ + + +R S L S + G Sbjct: 130 KLLLKENNVDE-----------------------------RRVDPSWLMEAFSAAKGEGN 160 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFI 428 A A L +A++ ++++ A+DF LIH + IL R Sbjct: 161 GSAYFRGEAQ---------------RLFEAYEAKMRSQGALDFDDLIHLPLKILSTHREA 205 Query: 429 -----SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 + +LVDE+QD++ + LL L + +T VGD QAIY + GA +S+ Sbjct: 206 LERELDSIEWVLVDEYQDVNRSQYMLLKRLSSRGQRT--VVVGDPDQAIYGWRGADVSMI 263 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL-- 541 F ++F + L+ YR I E AN I +N + KK L + + +K L Sbjct: 264 LNFDKDFQGAKVTVLEQNYRSTGHILEGANCVIARNSDRPKKNLWTAASRGEKIRILKAR 323 Query: 542 ----DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 D L + +L G + + IL R + + ++ + Sbjct: 324 NDEEDSRCLVDWILELQGEGYALKDMAILYRVNALSRLYEQRLIEAGIPYR 374 Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 57/171 (33%), Gaps = 24/171 (14%) Query: 518 QNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASL 577 + +L G + + D+S + L + I A Sbjct: 473 RGNIRLAVRYILEEYGYGEHLEREDQSTFEERLQNVEELMSVLPEGSI--DDVLSEVALF 530 Query: 578 EKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDF 637 A ++ +T+HA+KG + V +VGL+EG + + Sbjct: 531 SDADVASGDDRVSLLTLHAAKGLEFPVVFMVGLEEGIFPNAKCREDRSL----------- 579 Query: 638 PDAEERRLMYVALTRARHRVWALFNKENP----------SPFVEILKNLDV 678 EERRL YV +TRA+ R++ S F+ + + V Sbjct: 580 -LEEERRLFYVGMTRAQERLFLSGAARRVLFGSFMMNPFSRFLSEIPSSCV 629 >UniRef50_C7M335 UvrD/REP helicase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M335_ACIFD Length = 715 Score = 347 bits (891), Expect = 7e-94, Method: Composition-based stats. Identities = 98/412 (23%), Positives = 156/412 (37%), Gaps = 53/412 (12%) Query: 191 QVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFG 250 + LNP+Q AV +LVLAGAGSGKT VL R WLLA GE P IL + F Sbjct: 3 EELLEDLNPSQREAVSAPIGPVLVLAGAGSGKTRVLTRRVAWLLAAGE-RPSSILAITFT 61 Query: 251 RKAAEEMDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFI 308 KAA EM ER+R + + TFHA +++ + + S + Sbjct: 62 NKAAGEMAERVRSLVGPNADGLWVSTFHAACARMLRLHPELGGLRSGWSIYDQDDARRLL 121 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 ++ + R +A ++ + + Sbjct: 122 ERTIRRL-------------------------DLDTKRFPPRAIAQQVSLAKARLVDPER 156 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-- 426 E + +A + ++++ AL NA DF LI + L Sbjct: 157 FTDEAEG-----------LYERQVAMVYRSYQAALAEANAADFDDLIGLVVEGLATRPEL 205 Query: 427 ---FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 + ++H+L+DE+QD +P + A +A L ++ ++FAVGD Q+IY F GA S Sbjct: 206 AEHWRRRFRHVLIDEYQDANPAQHAFVAELVGRSG--SVFAVGDVDQSIYAFRGADPSGV 263 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLL-- 541 F E F + L+ YR + I +AN I +N + K L S A Sbjct: 264 LTFEERFDGAKVVTLEQNYRSTNAILGLANAVIAKNRRRYAKHLFSELGEGTPARRYQAT 323 Query: 542 ----DESQLDALLDK-LSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 + + A + + L I ++ R + E + + Sbjct: 324 DERDEARWVAATVREFLQRGGVDPSEIAVIFRTNAQSRPLEEAFSEAGIPFR 375 Score = 92.4 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 37/105 (35%), Gaps = 22/105 (20%) Query: 590 DFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVA 649 +T HA+KG + D E + + V+ EERRL YVA Sbjct: 546 TLLTAHAAKGLEFDV------------VVVVGLEEGVFPHVRAIVDAEAVEEERRLFYVA 593 Query: 650 LTRARHRVWALFNKEN----------PSPFVEILKNLDVPVARKP 684 +TRAR + + PS F++ L V P Sbjct: 594 MTRARTTLVLTSARRRASWGEPLYNPPSRFLDELPADLVATTAAP 638 >UniRef50_O31626 Putative ATP-dependent DNA helicase yjcD n=3 Tax=Bacillus RepID=YJCD_BACSU Length = 759 Score = 347 bits (891), Expect = 7e-94, Method: Composition-based stats. Identities = 96/429 (22%), Positives = 155/429 (36%), Gaps = 60/429 (13%) Query: 175 QAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLL 234 + + F V LN Q +AV E LLVLAGAGSGKT VL ARA ++ Sbjct: 117 TPFVPKTIEPDTSLFPSV---GLNTDQLKAVTETEGPLLVLAGAGSGKTRVLTARAAHMI 173 Query: 235 ARGEASPEQILLLAFGRKAAEEMDERIRERLH-----TEDITARTFHALALHIIQQGSKK 289 PE +LL+ F KA EM ER+ + I TFH+L I+ Sbjct: 174 EHLGIPPENMLLVTFTTKAVAEMKERMANQYGLQPAKVRRIVTGTFHSLFYKIL------ 227 Query: 290 VPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQ 349 S L EW+++ KKA + + E Sbjct: 228 --YHSNSA--KWNGEHLLKMEWQREQYIKKALYE----------------EGIDEKESPV 267 Query: 350 RRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAV 409 + ++ W + P E L + K + L + ++ K + Sbjct: 268 DQALQQIGFWKNTYV-------------PNERIPLKDEWEKQVYRLYEHYERQKKEHSQF 314 Query: 410 DFSGLIHQAIVILEKGR-----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFA 464 DF + + + + S + +IL+DEFQDI+P + ++ L + L Sbjct: 315 DFDDMASACYELFIERPDLLEQYQSRFTYILIDEFQDINPVQYKIMQMLAS--PEQNLCC 372 Query: 465 VGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLK 524 VGDD Q+IY F G+ S F +++ + L YR I A+ +++N + Sbjct: 373 VGDDDQSIYAFRGSNPSFILDFQKDYPGAKTIYLTANYRSTHPIVSSADIVVKKNKNRYA 432 Query: 525 KPLNSLTNGDKKAVTLLDESQLDA------LLDKLSGYAKPEERILILARYHHMRPASLE 578 K L + + + V + + + + E +L R + A E Sbjct: 433 KTLEAARDDIQVPVLFYPYDEEEEATMVVSDIKEKIQNGASPEDFAVLYRTNSGGRAIYE 492 Query: 579 KAATRWPKL 587 + Sbjct: 493 RLHQSSIPY 501 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 56/150 (37%), Gaps = 17/150 (11%) Query: 541 LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQ 600 + ++L+ D L ++ + + R + + MTIH SKG Sbjct: 618 NEGNKLEKGSDDLRDIKVVAKKFKTIPDFLAHVDHMRAAEKNRTDEHGVQLMTIHRSKGL 677 Query: 601 QADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWAL 660 + V ++G +GS + ++ EERRL+YVA+TRA+ ++ Sbjct: 678 EFKTVYVLGTVDGSIPHDFSLET-------ARKGDEAALEEERRLLYVAMTRAKQHLYLS 730 Query: 661 FNKEN------PSPFVEILKNLDVPVARKP 684 S F+ L AR+P Sbjct: 731 CPANRRGKTANRSRFLYPLLQK----ARQP 756 >UniRef50_B8FB90 UvrD/REP helicase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FB90_DESAA Length = 638 Score = 347 bits (891), Expect = 8e-94, Method: Composition-based stats. Identities = 93/407 (22%), Positives = 155/407 (38%), Gaps = 47/407 (11%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 LN +Q AV E +LV+AGAGSGKT L R L+ G A P +ILLL F RKA Sbjct: 8 EKDLNESQYEAVTTLEGPMLVIAGAGSGKTRTLTYRVARLVDSG-APPARILLLTFTRKA 66 Query: 254 AEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEW 311 +EEM R L +D+ TFH+ + ++++ + K+ E I Sbjct: 67 SEEMLRRAGVLLGMDCDDVAGGTFHSFSHQMLRRYAFKLGFDPGFVILDRPDCEALIDRL 126 Query: 312 RKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQA 371 +K+ KG R + + S+ + +++ L S + ++ Sbjct: 127 KKELV-----PKGVRNFPRKGTVASIFSRSANTGMSVEKILFSEYNHFI----------- 170 Query: 372 EMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFIS-- 429 ++ + + EN +DF L+ ++L I Sbjct: 171 ---------------PHKDILDEMYTQYALTKSQENLMDFDDLLLHMRIMLATEPEIRDV 215 Query: 430 ---PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAF 486 + +I+VDE+QD + +A +L L + VGDD Q+IY F GA F Sbjct: 216 IAKKYDYIMVDEYQDTNLIQADILRYL--GEGHQNVMVVGDDCQSIYGFRGANFENIMRF 273 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL------ 540 + F + L+ YR + +V N+ ++Q + K L + G V + Sbjct: 274 PDVFPGTKIIRLEENYRSYQPVLDVTNKIVKQATRKYSKTLFTNLQGGAAPVLVSTRDEN 333 Query: 541 LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKL 587 + + +L P I +L R + + K Sbjct: 334 SQSQFVVDEVKRLQSQDVPLREIAVLFRAGYQSFDLEVELTRAGIKF 380 Score = 95.0 bits (235), Expect = 8e-18, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 22/103 (21%) Query: 583 RWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEE 642 P ++ TIH++KG + + V ++ +G A E EE Sbjct: 538 EAPPDRMVLSTIHSAKGLEWEAVFVIWTLDGRFPSRQAVA-----------KEGESLEEE 586 Query: 643 RRLMYVALTRARHRVWALFNKE-----------NPSPFVEILK 674 RLMYVA TRA+ ++ + + PS F+E L Sbjct: 587 LRLMYVAATRAKKELFFVHPTDVFDAASMTYLYRPSRFLERLP 629 >UniRef50_C6NVE2 ATP-dependent DNA helicase Rep n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NVE2_9GAMM Length = 663 Score = 347 bits (890), Expect = 8e-94, Method: Composition-based stats. Identities = 94/412 (22%), Positives = 153/412 (37%), Gaps = 57/412 (13%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 + LN Q AV +LVLAGAGSGKT V+ + L+ P I + F KA Sbjct: 5 LADLNGPQREAVARVHGPVLVLAGAGSGKTRVITRKIVHLIQDHGVEPRHIAAVTFTNKA 64 Query: 254 AEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 A EM R+++ L +T TFH L L I++Q ++ + Sbjct: 65 AREMKGRVQQSLEGRSARGLTISTFHRLGLEILRQDITQLGYRENFSVVDPGDSLTLVRN 124 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 ++ LA + +S + G Sbjct: 125 LLREMQG-------------------------------PSDLAESIQARISKAKNDGHGP 153 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK-----G 425 +M + + +L + + ++ ALKA N+VD LI +L + Sbjct: 154 EDM---------PIRDRLDELAQRVYRPYQRALKACNSVDLDDLILLPTELLSRFAEAQE 204 Query: 426 RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 R+ +++LVDE+QD + + LL L K+ + L AVGDD Q+IY + GA Sbjct: 205 RWQERIRYLLVDEYQDSNGAQYRLLQNLLKK--RQNLTAVGDDDQSIYSWRGAAADNLQR 262 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS---LTNGDKKAVTLLD 542 ++F + L+ YR RI + AN I NP +K L S + + V + Sbjct: 263 LAQDFPDLRLIKLEQNYRSTGRILQAANHLIAHNPHLFEKKLWSSLGEGDRIQVIVARDE 322 Query: 543 ESQLDALLDKLSG----YAKPEERILILARYHHMRPASLEKAATRWPKLQID 590 + + +++ + IL R +H Q+ Sbjct: 323 TDEAEQVVNAILRDRFQRQGEYRDYAILYRSNHQSRPFETALRNARIPYQLS 374 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 55/149 (36%), Gaps = 25/149 (16%) Query: 543 ESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQA 602 E L + L P+ +L R + LE+ + + T+H +KG + Sbjct: 506 EELLAWMARLLEQEDGPKNLAELLNRLSVIH--ILERDEDDEERDVLRLSTLHGAKGLEF 563 Query: 603 DYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFN 662 V +VG++E + EERRL YV +TRARH++ + Sbjct: 564 SRVFLVGVEEELLPHRNS-------------ETPAQIEEERRLFYVGVTRARHKLSLSYC 610 Query: 663 KEN----------PSPFVEILKNLDVPVA 681 + PS F++ L + A Sbjct: 611 RRRKRYGEAQAPEPSRFLQELPRELLDWA 639 >UniRef50_B0DAK6 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0DAK6_LACBS Length = 1055 Score = 347 bits (890), Expect = 9e-94, Method: Composition-based stats. Identities = 85/394 (21%), Positives = 152/394 (38%), Gaps = 38/394 (9%) Query: 194 SSPLNPAQAR-------------------AVVN-GEHSLLVLAGAGSGKTSVLVARAGWL 233 + LN AQ R AV E L +LAG GSGKT VL +R L Sbjct: 6 LNSLNDAQLRGQTRPSISVIILLTRTTLVAVKYWPETPLQILAGPGSGKTKVLTSRIAHL 65 Query: 234 LARGEASPEQILLLAFGRKAAEEMDERIRERLHTED---ITARTFHALALHIIQQGSKKV 290 + P I + F KAA EM ER+ + + E + TFHAL +++ + V Sbjct: 66 ILNHHLPPFSICAVTFTNKAANEMRERLTKLIGKERTSQLRMGTFHALCARFLRKYAHLV 125 Query: 291 PIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQR 350 + A + I K + ++Q + + ++ Sbjct: 126 KLAENFTVCDAEESKKIIQALLK-------PYTAYLASENLDLQPGRVVSSISKAKSKEQ 178 Query: 351 RLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVD 410 + L+ + R + EE + + +++ + ++ LK NA+D Sbjct: 179 SGSVFLEEVIKAERRIRQRNGLPLGDDVEEKKTI----DRIIGEIFLEYEKTLKRNNALD 234 Query: 411 FSGLIHQAIVILEKGRFISPW-KHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDW 469 F L+ + + K W +HILVDEFQD + + L+ AL + VGD Sbjct: 235 FDDLLTYGVKLFTKNDETVIWCRHILVDEFQDTNITQYKLMRALAIAR---CVTIVGDPD 291 Query: 470 QAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNS 529 Q+IY + A++ + +F + E+ L+ YR + I + + I Q+ +++K L++ Sbjct: 292 QSIYGWRSAEVGNLSKMRRDFPDTEQVLLEENYRSTAAILKASLAIISQDKSRIQKSLHT 351 Query: 530 LTNGDKKAVTLLDESQLDALLDKLSGYAKPEERI 563 V +++ + + + Sbjct: 352 SHPNGFTPVLYQVQTEHEEAAFIAIEMKRLVAHM 385 Score = 92.0 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 55/163 (33%), Gaps = 29/163 (17%) Query: 525 KPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRW 584 K L + + + + + A D + L M + + + Sbjct: 556 KELITFASEMEAQNQAEEAADAVAGGD---NSIEMSTTPLRQFLQASMLSSEGDNQSEEG 612 Query: 585 PKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERR 644 K ++ T H++KG + V+I + + + F + AEERR Sbjct: 613 NKDKVTISTCHSAKGLEWPVVMIPSVDQNTFPFYRSEDT----------------AEERR 656 Query: 645 LMYVALTRARHRVWALFNKENP----------SPFVEILKNLD 677 L+YVA TRA+ ++ S F+ + N + Sbjct: 657 LLYVACTRAQSLLYVSRATTRMVAGETKSKELSEFISSVLNDN 699 >UniRef50_A7HBX8 UvrD/REP helicase n=7 Tax=Cystobacterineae RepID=A7HBX8_ANADF Length = 745 Score = 347 bits (890), Expect = 9e-94, Method: Composition-based stats. Identities = 109/442 (24%), Positives = 170/442 (38%), Gaps = 47/442 (10%) Query: 163 LKDIESARLQHNQAYTEAMLTEYADFFRQVESSPL-NPAQARAVVNGEHSLLVLAGAGSG 221 + D + + L A R + L N Q V G+ +LV+AGAGSG Sbjct: 1 MSDRPARLHLPERMSRRYQLKSAAPPARALNYQGLLNDQQIAVVEAGDGPILVVAGAGSG 60 Query: 222 KTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRE--RLHTEDITARTFHALA 279 KT L R LLA G ASPE ILLL F KAA+EM R+ E RL T IT TFH +A Sbjct: 61 KTRTLTWRVARLLAEG-ASPESILLLTFTNKAAQEMLRRVGEVCRLDTRQITGGTFHHVA 119 Query: 280 LHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPE 339 ++++ ++ ++ C + + Sbjct: 120 HQLLREHGGELGYRKGYSILDREDSSDVMSAAIADCGLAVGARRFPK------------- 166 Query: 340 GNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAW 399 A L VS+ A+++A + L + + + + Sbjct: 167 -------------ADVLIDLVSMAVNTQTPLADVLADRRPQFVPLTDD----VLRVARRY 209 Query: 400 KGALKAENAVDFSGLIHQAIVILEKGR-----FISPWKHILVDEFQDISPQRAALLAALR 454 NA+DF L+ ++L + ++H+LVDE+QD + + ++ + Sbjct: 210 AERKHELNAMDFDDLLLNWKILLAEREAVRRAVAGRYRHVLVDEYQDTNRLQGDVVDLVA 269 Query: 455 KQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANR 514 ++ L VGDD Q+IY F GA + F + + + R DL YR +I +AN Sbjct: 270 GEHR--NLCVVGDDAQSIYAFRGAHFANILEFEKRYPDARRYDLTVNYRSTPQILGLANA 327 Query: 515 FIQQNPGQLKKPLNSLTNGDK-KAVTLLDE-----SQLDALLDKLSGYAKPEERILILAR 568 I N Q +K L S+ AV E + + + +L P I +L R Sbjct: 328 SIAANVRQFEKELTSVRPDGTLPAVVPCREVQQQAAFVAQRVLELRDEGIPLPEIAVLYR 387 Query: 569 YHHMRPASLEKAATRWPKLQID 590 HH + A R + Sbjct: 388 AHHHAMEIQFELARRGIPFVVR 409 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 52/146 (35%), Gaps = 25/146 (17%) Query: 542 DESQLDALLDKLSGYAKPEERI--LILARYHHMRPASLEKAATRWPKLQIDFMTIHASKG 599 + L +L+ YA+ E + + + P ++ ++H +KG Sbjct: 533 NADSRVEDLRQLAEYARGYEDTETFLAEISLLTELTAETVSEGGDPDEKMVLSSVHQAKG 592 Query: 600 QQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWA 659 + V +V L +G A ++ E EERRL YVA TRA+ ++ Sbjct: 593 LEWRAVFVVWLSDGRFPSAQALKDRDGE------------EEERRLFYVACTRAKDELYL 640 Query: 660 LFN-----------KENPSPFVEILK 674 + S FVE L Sbjct: 641 TYPILAAPRDRERVVMKASRFVEELP 666 >UniRef50_Q4A5L9 Atp-dependent helicase n=2 Tax=Mycoplasma synoviae 53 RepID=Q4A5L9_MYCS5 Length = 734 Score = 346 bits (889), Expect = 1e-93, Method: Composition-based stats. Identities = 87/417 (20%), Positives = 155/417 (37%), Gaps = 48/417 (11%) Query: 188 FFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLL 247 F ++ LN Q AV + L ++AGAG+GKT VL + +L+ + P +IL + Sbjct: 4 FKKKDLLDDLNEKQREAVEYFDSHLRIIAGAGTGKTKVLTRKILYLILEKKVDPSKILAV 63 Query: 248 AFGRKAAEEMDERI-RERLHTEDI---TARTFHALALHIIQQGSKKVPIVSKLENDTAAR 303 F KAA+EM +RI + + + T H+ ++++ + Sbjct: 64 TFTNKAAKEMKDRINSKYYDKQKVLFENVFTLHSFCAQVLRKYINLIGFSRNFPILDELD 123 Query: 304 HELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLM 363 + + + + + E +A + + + Sbjct: 124 KKQVLQDL-------------------------YVKNKITNHEVSYSNMAKYISWAKNNL 158 Query: 364 RMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE 423 AE+ E + K +A + + + + + A+DF LI +LE Sbjct: 159 LDQKDLIAEL------EKQFSGDAVSKTIANVYQDYLNYMAEKGALDFDDLILHCKTLLE 212 Query: 424 KGR-----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGA 478 + +ILVDEFQD S + +L + ++SQ L VGD Q IY + GA Sbjct: 213 MHPNVAAKIARYFNYILVDEFQDTSDLQFDILEKIIDKSSQ--LTIVGDPDQTIYNWRGA 270 Query: 479 QMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAV 538 + L F F + LDT YR +I AN+ I+ N + K L + + Sbjct: 271 SVDLILNFENIFENSKTIVLDTNYRSTKKILASANKLIKNNKNRFSKDLITNNDEGNDIE 330 Query: 539 TLL------DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 + + + + L + I+IL R ++ A + +I Sbjct: 331 FYHAFNTEAEAQWVISKIKLLKKQKHQIKNIVILYRSNYYSRAFEDALLGEGINYKI 387 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 10/98 (10%) Query: 586 KLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRL 645 + MTIHASKG + D V IVGL EG ++ + + EERRL Sbjct: 559 DDFVSLMTIHASKGLEFDNVFIVGLTEGVFPNYKHLEDAKENKHKTKTELNKGIEEERRL 618 Query: 646 MYVALTRARHRVWALFNK----------ENPSPFVEIL 673 YVA+TRAR ++ ++ + S F+ + Sbjct: 619 AYVAITRARKNLFVSDSRGSVYAPIIHEKQTSRFIREM 656 >UniRef50_A4IYZ2 ATP-dependent DNA helicase/UvrD/REP helicase n=21 Tax=Francisella RepID=A4IYZ2_FRATW Length = 671 Score = 346 bits (888), Expect = 1e-93, Method: Composition-based stats. Identities = 94/420 (22%), Positives = 165/420 (39%), Gaps = 56/420 (13%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 LN Q +AV LLVLAGAGSGKTSV++ + +L+ + + IL + F KA Sbjct: 2 LDNLNQQQQQAVKYIATPLLVLAGAGSGKTSVIIEKISYLIEQLLYPAKSILAVTFTNKA 61 Query: 254 AEEMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 A+EM ER++ RL ++ + TFH+L L I+++ ++ + I + Sbjct: 62 AKEMQERVKSRLDKEKSKGLMISTFHSLGLSILKKHFNELGYKKNFTLFDSHDSLALIYD 121 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 +D+ +L ++ AS + +S + Sbjct: 122 I------------------------------AYDEYQLPKQNASFIQAKISFWKSALLTP 151 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR---- 426 ++ E + A + + ++ LK+ N+ DF LI Q I + Sbjct: 152 DQVKPKDELE---------EQAAFIYQEYQKYLKSYNSFDFDDLIFQPIQLFRNHSNIQK 202 Query: 427 -FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 + +++IL+DE+QD + + LL L + VGDD Q+IY + G++ Sbjct: 203 LWADKFRYILIDEYQDTNESQYQLLKYLTL--GKNKFTVVGDDDQSIYAWRGSRPENLRH 260 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVT---LLD 542 E+F + + L+ YR RI VAN+ I+ N K L S + ++ + D Sbjct: 261 LQEDFADLKVIKLEQNYRSTGRILNVANKLIENNSHIFDKKLWSNKDYGEQIKVISLIND 320 Query: 543 ESQLDALLDKL----SGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASK 598 E + + + +L R ++ I + SK Sbjct: 321 EDEAQFIASDIFFDRVKTKSKNSDYAVLIRSNYQAYLLERYMQMHKIPYTISGGSSFFSK 380 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 67/188 (35%), Gaps = 23/188 (12%) Query: 504 FNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERI 563 + + N FI + +S + + ++++L + Sbjct: 471 SVQELKNIINSFIDNISYRQWLIDSSSSEKQAEFRYANIIEVTKWIVNQLEDESYNGLES 530 Query: 564 LILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARE 623 L + L++ Q+ +T+HASKG + V I+G++EG + + Sbjct: 531 LATVLNKMLLIDILDRDNEDKNDNQVQIITMHASKGLEFKKVYIMGMEEGILPHQQSIED 590 Query: 624 SIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEIL 673 +E+ ERRL YVA+TRAR + K PS F++ L Sbjct: 591 DSIED-------------ERRLAYVAITRARENLTITMTKHRKKFGEKQVSVPSRFIDEL 637 Query: 674 KNLDVPVA 681 D+ Sbjct: 638 PETDLYWV 645 >UniRef50_A6CGD0 ATP-dependent DNA helicase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CGD0_9PLAN Length = 693 Score = 346 bits (887), Expect = 2e-93, Method: Composition-based stats. Identities = 88/443 (19%), Positives = 155/443 (34%), Gaps = 68/443 (15%) Query: 183 TEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPE 242 + D F+Q LNP Q A + LL++AGAG+GKT+ L R +L+A+G P Sbjct: 6 PQLEDLFKQ-----LNPEQQAAACHDTGPLLIIAGAGTGKTTTLSHRVAYLIAQG-IDPS 59 Query: 243 QILLLAFGRKAAEEMDERIRERLHT-------------EDITARTFHALALHIIQQGSKK 289 +ILLL F R+AA EM R+ L I TFH+ A ++++ + Sbjct: 60 RILLLTFSRRAANEMVRRVDALLRAMSAGRENTASARSRSIWGGTFHSTAARLLRRYGQA 119 Query: 290 VPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQ 349 + + + E ++ R + K R+ Sbjct: 120 IGLPDDFTIIDRSDAEDLMSALRSELDLGNNGKKFPRK---------------------- 157 Query: 350 RRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAV 409 L R V+ + E + + L +A+ + +N + Sbjct: 158 GTLLEIYSRCVNTC--------SKLEPILERHYPWCLEHADELKKLFQAFVDRKEKQNIL 209 Query: 410 DFSGLIHQAIVILEKGR----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAV 465 D+ L+ + ++ +LVDE+QD + ++ +L + L V Sbjct: 210 DYDDLLLFWHALAADPAGGKLLRGQFEAVLVDEYQDTNILQSGILKNICPDGEG--LTVV 267 Query: 466 GDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKK 525 GDD Q+IY F A + F + + L+ YR I + N+ I + + +K Sbjct: 268 GDDAQSIYSFRAATVRNILDFPQEYEGTTVVTLEENYRSTQPILQATNQIIDEAHERYEK 327 Query: 526 PLNSLTNGDKKAVTLL------DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEK 579 L S + + + + + P + +L R H + + Sbjct: 328 NLWSSKISGEAPCLVDCSDNNEQADFVVQQVLEHREAGIPLNQQAVLFRASHHSLSLEVE 387 Query: 580 AATRWPKLQIDFMTIHASKGQQA 602 A R H G + Sbjct: 388 LARRNIAY-------HKYGGLKF 403 Score = 92.0 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 12/82 (14%) Query: 584 WPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEER 643 + TIH+SKG + D V ++ +GS + EER Sbjct: 560 DDDDFLVLSTIHSSKGLEWDAVYVLQAADGSIPSEMSLESED------------EIDEER 607 Query: 644 RLMYVALTRARHRVWALFNKEN 665 RL YVALTRA++ ++ F Sbjct: 608 RLFYVALTRAKNWLYVCFPHRQ 629 >UniRef50_C6HUX3 Putative ATP-dependent DNA helicase, UvrD/REP family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUX3_9BACT Length = 796 Score = 345 bits (886), Expect = 3e-93, Method: Composition-based stats. Identities = 89/407 (21%), Positives = 163/407 (40%), Gaps = 50/407 (12%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LNP Q AV + E LLVLA AGSGKT V++ R +L+ R E + F RKAA Sbjct: 20 GLNPEQRLAVTHEEGPLLVLAPAGSGKTRVVIERLLFLIERSGRGGESFFVATFTRKAAR 79 Query: 256 EMDERIRERLHTED-ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQ 314 E+ ERI RL TFH+L+ ++++ + + + A + + E ++ Sbjct: 80 ELVERISHRLPDARLPYVGTFHSLSARLLRRLADRAGLPPDFTVSDAGDQKALVREIMRR 139 Query: 315 CSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMI 374 +++ + + ++ +W + + G Sbjct: 140 -------------------------HKVSEEDVAPQEILRQISQWKNARQTPGP------ 168 Query: 375 ASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FIS 429 E+ + MA + ++ L+ ++D+ L+ + + +L Sbjct: 169 -----ELARRLFGSRRFMATCYEEYEEGLRKNRSLDYDDLLCRLVGLLSSQPDVATALRQ 223 Query: 430 PWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHEN 489 + HILVDE+QD +P + L+ L ++ + + VGDD Q+IYRF GA+++ F ++ Sbjct: 224 EFHHILVDEYQDTNPLQEELIRLLSRE--RRNVTVVGDDDQSIYRFRGAEVAHIQRFSDH 281 Query: 490 FGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDA- 548 + R L YR S I + A I++N G+ K + ++ G + + + Sbjct: 282 YPGAGRVLLSRNYRSTSAIVDSATSVIRKNDGRYMKTVTAVRGGGSPVLLMEFPDEEAEA 341 Query: 549 -----LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQID 590 +L + R +L R + + A Sbjct: 342 RGVAGILREWIAGGGRPSRAAVLFRTNAQSLPLEKAMAAAGVPFFRP 388 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 41/97 (42%), Gaps = 20/97 (20%) Query: 591 FMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVAL 650 MTIH SKG + D V++ GL++ F + EERRL YVA+ Sbjct: 565 LMTIHQSKGLEFDCVVVAGLEDQLLPFRS----------FAGGRSSTDIEEERRLFYVAM 614 Query: 651 TRARHRVWALFNKEN----------PSPFVEILKNLD 677 TRAR R+ + + PSPF+ + Sbjct: 615 TRARERLHLTWARTRRIYGKTQSFGPSPFLRDIPGEL 651 >UniRef50_D0L0Z4 UvrD/REP helicase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L0Z4_HALNC Length = 688 Score = 344 bits (883), Expect = 6e-93, Method: Composition-based stats. Identities = 88/410 (21%), Positives = 156/410 (38%), Gaps = 50/410 (12%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN Q+ AV + E LLVLAGAGSGKT V+ + +L+ + Q+ + F KAA+ Sbjct: 8 GLNAQQSAAVRHLESPLLVLAGAGSGKTRVITEKIVYLIEKQGIPARQVFAVTFTNKAAK 67 Query: 256 EMDERIRERLHTED---ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM R ERL E + TFH L L+ I++ + + + + Sbjct: 68 EMVARTAERLPPERRRGLNISTFHTLGLNFIRREYAALGLRAGFTVFDSDDSLALFKSLI 127 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 + + D + ++ +W + +R + Sbjct: 128 GH--------------------------SEYKDVIEPKAAQWQISQWKNDLRTPQSCYEQ 161 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRF 427 + + + + +A L ++ L A NA+DF LI + + +L+ + R+ Sbjct: 162 AKN-------EGWDEETRALAGLFDQYQRQLTACNALDFDDLIGRPVELLQSDAAVRERW 214 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 + +++LVDE+QD + + L+ L + L AVGDD Q+IY + GA+ Sbjct: 215 QARVRYLLVDEYQDTNTTQYELVRLLVGKIGA--LTAVGDDHQSIYAWRGAKPENLNRLA 272 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL------- 540 ++F R L+ YR + + + AN I + K L S + + Sbjct: 273 DDFPNLHRIKLEQNYRSVNSVLKAANHLIALDTTTASKQLWSDIGMGEPHRVIVAATAED 332 Query: 541 LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQID 590 E +L + +L R +H + + Sbjct: 333 EAERIATEILHRHFRAQTEYRDFAVLFRGNHQARLIEQALRKLNIPYSLT 382 Score = 97.7 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 22/115 (19%) Query: 577 LEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVED 636 L++ + +T+HA+KG + +V + G++E ++ Sbjct: 558 LDQQTREKDSNAVALLTLHAAKGLEFGHVFMAGMEEDILPHRDCIE------------DE 605 Query: 637 FPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDVPVA 681 AEERRL +V +TRAR + K PS F++ + + Sbjct: 606 ARLAEERRLCFVGITRARLSLTFTLTKRRRRYGEWKDTEPSRFLDDIPADLLQWQ 660 >UniRef50_P57654 ATP-dependent DNA helicase rep n=4 Tax=Buchnera aphidicola RepID=REP_BUCAI Length = 645 Score = 343 bits (881), Expect = 1e-92, Method: Composition-based stats. Identities = 93/410 (22%), Positives = 159/410 (38%), Gaps = 54/410 (13%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 LN +Q AV L+LAGAGSGKT V++ + +L+ + P+ I + F KAA Sbjct: 2 SLNFSQKNAVELTNGPCLILAGAGSGKTKVIINKIIYLINHCQYEPDNIAAVTFTNKAAY 61 Query: 256 EMDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM R+ + L+ + I TFH+L L II++ + + + L + + Sbjct: 62 EMRIRLSKYLNIPEIKKIIISTFHSLGLEIIKKEIDALELNNNFTLLDEKDQILLLKKIC 121 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 K+ ++ +L ++L + W + Q Sbjct: 122 KK--------------------------EIKNNIQLLKKLNFMISYWKNKFLTPLQVQ-- 153 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RF 427 S + K A + + + L N +DF LI ++L+ R+ Sbjct: 154 ---------LLAKSSQEKDFAYVYEQYTNYLYKANILDFDDLICMPTLLLKNNKKIKIRW 204 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 ++LVDE+QD + + L+ L +NS TL VGDD Q+IY + GA Sbjct: 205 QKKISYLLVDEYQDTNNSQYELIKMLANKNSDFTL--VGDDDQSIYSWRGANPQNIFLLK 262 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL---LDES 544 ++F + ++ YR + RI + AN I N L+K L S L +E+ Sbjct: 263 KDFPNLKIIKMEHNYRSSGRILKAANSLIANNIHYLEKKLFSQLKYGNLIKVLIGKNEEN 322 Query: 545 QLDALLDKL----SGYAKPEERILILARYHHMRPASLEKAATRWPKLQID 590 + ++ K+ + IL R ++ + I Sbjct: 323 EAQKIVKKIISQYAKKKIKYRDFAILYRGNYQSRILEKALIKENIPYNIS 372 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 55/147 (37%), Gaps = 23/147 (15%) Query: 547 DALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVI 606 + + G + L L+ + + ++ MT+HASKG + V Sbjct: 510 QWFKNMIKGDDFEKPMTLFQIVTRMTIRDILDDNIIKEQQDRVQLMTLHASKGLEFPAVF 569 Query: 607 IVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN- 665 I+G+ EG + + EERRL YV +TRA+ +++ + + Sbjct: 570 IIGMCEGILPNQKSIDNDNI-------------EEERRLTYVGITRAKKQLFFTYCYKRT 616 Query: 666 ---------PSPFVEILKNLDVPVARK 683 PS F+ L D+ +K Sbjct: 617 QYGQILDMLPSRFLFELPQEDLKWEKK 643 >UniRef50_B2KB12 UvrD/REP helicase n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KB12_ELUMP Length = 786 Score = 343 bits (880), Expect = 1e-92, Method: Composition-based stats. Identities = 83/409 (20%), Positives = 152/409 (37%), Gaps = 49/409 (11%) Query: 193 ESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 LNP Q AV++ L++AGAG+GKT L R L+ G +P +IL + F K Sbjct: 6 LLQSLNPMQQEAVLHQNGPCLIIAGAGTGKTKTLTTRIAALIENG-VNPNRILAVTFTNK 64 Query: 253 AAEEMDERIRERLHTE--DITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAE 310 AA +M ER+ + + TFH+ + +++Q + + + + + I Sbjct: 65 AAAQMRERVEALAPGQSGRVWIHTFHSFGVRLLRQNAHLLKLTKDFAIYDESEQKKIITL 124 Query: 311 WRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQ 370 ++ +K D +K + S + R M Sbjct: 125 VLQEMGQK-------------------------DAKKEINQYISLISRAKDDMIDPESFA 159 Query: 371 AEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR---- 426 +AS A + K ++ L A A+DF L+ + +L+ Sbjct: 160 ISALASN--------IDFKIRAAEVYKRYQNKLNAAGALDFGDLLVKTAELLKNNEDVRE 211 Query: 427 -FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTA 485 + + ++HILVDE+QD + + + L ++ L VGD Q+IY + GA + Sbjct: 212 YYQNIFQHILVDEYQDTNHTQYIITRTLAYKHR--NLCVVGDPDQSIYSWRGANIRNILE 269 Query: 486 FHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL----- 540 F ++F + + L+ YR I + +N+ I++N + K L S + Sbjct: 270 FEKDFPDAKIITLEQNYRSTQIILDSSNKLIKKNKKRKDKSLYSNKTSGEPIEVRELLTE 329 Query: 541 -LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 + + L I + R + + + Sbjct: 330 GEEARWTAQNIANLIEDGASLNDIAVFYRTNAQSRNFEDNFRKYQLPYR 378 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 64/177 (36%), Gaps = 31/177 (17%) Query: 506 SRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILI 565 ++I ++ + + +++K L + D + + + + + A + + Sbjct: 485 NKILTLSGYW-KAVEDEVEKDLEAGARLDNLQELVNAVKEYEERMARTEREASLSDFV-- 541 Query: 566 LARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESI 625 + + + MT+H +KG + V + GL+EG Sbjct: 542 ----QEISLITGADEKQDSSAGAVTLMTVHLAKGLEFPVVFVSGLEEGLFP--------- 588 Query: 626 MEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKEN----------PSPFVEI 672 L +D EERRL YVA+TRA+ R++ + PS F+ Sbjct: 589 -----LSSKDDDDLEEERRLCYVAMTRAKDRLFMTYTSTRRIFGKMYTNLPSRFLFE 640 >UniRef50_B3SEY0 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3SEY0_TRIAD Length = 863 Score = 343 bits (880), Expect = 1e-92, Method: Composition-based stats. Identities = 89/548 (16%), Positives = 185/548 (33%), Gaps = 70/548 (12%) Query: 72 TEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENKWLTREQT-----S 126 E + + + + +I ++++ I + + T Sbjct: 258 LPLIEYHKLIEFYENADKDNIEKQLKILENAVKKEAKSINEKYIKPPHSTDFAVLFLPVE 317 Query: 127 GVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLK-DIESARLQHNQAYTEAMLTEY 185 G+ +I + + ++ ++ ++ +L Sbjct: 318 GLYAEIIRIPGLIDKLQRDYRVVITSPTTLIALLNSIQMGFKTLAIEKRSNEVWKLLDTV 377 Query: 186 ADFFRQVESS------PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEA 239 F L+ A ++A+ AGAG+GKT VL +R L+ +G A Sbjct: 378 KHEFSNFVGILSKTKVKLDQA-SKAI----GDAEYKAGAGTGKTKVLTSRVIHLINKGFA 432 Query: 240 SPEQILLLAFGRKAAEEMDERIRERLH--TEDITARTFHALALHIIQQGSKKVPIVSKLE 297 P QIL + F EM + + L+ + + TFH++A I+++ ++ + + Sbjct: 433 FPSQILAVTFT--IGNEMKQEFEKFLNNISGSMNIGTFHSMAAKILRRHAELIGYNTDFT 490 Query: 298 NDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLD 357 I + K D + L ++ Sbjct: 491 IINQDDQIRLIKQLIKDFGLD-------------------------DKNTSAKVLLYYIN 525 Query: 358 RWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQ 417 R+ M ++ + + + ++ L+ NA+DF L+ Sbjct: 526 RFKDRAIMPKNLSSQEVEHYANGKLN----------EIYCEYQNRLENFNAMDFGDLLLN 575 Query: 418 AIVILEKG-----RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAI 472 I + + + + +K+ILVDE+QD + + + L +++ + VGDD Q+I Sbjct: 576 NIRLFNENLDICEYYQNKFKYILVDEYQDTNIAQYLWVRTLSQKH--NNICCVGDDDQSI 633 Query: 473 YRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTN 532 Y + GA+++ F +++ + + L+ YR I +A+ I N + K L + Sbjct: 634 YAWRGAEITNILRFDKDYPDAKVIRLEKNYRSTQHILSLASNLISNNKNRHSKVLWTDQK 693 Query: 533 GDKKAV---TLLDESQLDALLDKL----SGYAKPEERILILARYHHMRPASLEKAATRWP 585 K D+ + A+ D++ I IL R + E Sbjct: 694 DGNKVKIINYYDDKEEARAIADEIDMVERLKKTKLSDIAILVRAGYQTRNFEESLNFLGI 753 Query: 586 KLQIDFMT 593 +I T Sbjct: 754 PYRIVGST 761 >UniRef50_C1E652 ATP-dependent DNA helicase n=2 Tax=Micromonas RepID=C1E652_9CHLO Length = 907 Score = 343 bits (880), Expect = 1e-92, Method: Composition-based stats. Identities = 102/474 (21%), Positives = 173/474 (36%), Gaps = 50/474 (10%) Query: 139 LPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEAMLTEYADFFRQVESSPLN 198 L RL + W Q S+ + A +N Sbjct: 10 LEPFARRLRLSNRAPPRWGPVQRRAAAGFSSPAHSAEPMFRADAPH---------LEGMN 60 Query: 199 PAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMD 258 Q A+V + VLAG GSGKT VLV R L+ P IL + F KAA EM Sbjct: 61 DEQIAAIVAPVAPMKVLAGPGSGKTRVLVGRVTHLINELGVPPSHILCITFTNKAAREMR 120 Query: 259 ERIRERLH---TEDITARTFHALALHIIQQGSKKV---PIVSKLENDTAARHELFIAEWR 312 ER+ + ITA TFH++A ++++ + + A + I + Sbjct: 121 ERLVASVGEENARQITAGTFHSVASRMLRKHVHLLDGYGRGNDFVIYDEADTKSIIRKIM 180 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 + + + D + R+++ + + M G A Sbjct: 181 --------------------VDVFMEDKKKADPALAKSRISAAKSAVDACVGMDGRRMAR 220 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----F 427 + ++ R + L ++ L++ NA+DF L+ A+ +L + Sbjct: 221 ALCDTRPSLKRDPYIRDQ-FPRLYDEYEANLRSSNALDFDDLLSAAVALLRTSEEARLFY 279 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTT-AF 486 W+H+LVDEFQD S + L+ AL + ++ +F VGD QAIY + GA+++ F Sbjct: 280 RQRWRHVLVDEFQDTSLSQYELIRALAAETAR--VFVVGDVDQAIYSWRGAEVANIRTKF 337 Query: 487 HENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQL 546 +F L YR + I + A I ++ + L+++ G K + E ++ Sbjct: 338 DSDFAGAGTVLLTKNYRSTATIVKAAQAVIGESRDRSPLELDAVRPGGKDVAVVATEDEI 397 Query: 547 ------DALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTI 594 + + P + I +L R H E + T Sbjct: 398 EEADFAAREAARAARSGVPLKDIAVLYRTHSQSRPLEEAFIRAGVPHVVVGDTA 451 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 20/106 (18%) Query: 583 RWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEE 642 + MT+HA+KG + D V+I G ++ F + EE Sbjct: 658 DEGADAVKLMTLHAAKGLEFDTVLITGCEDELIPFKRGDA----------SSDAAEHDEE 707 Query: 643 RRLMYVALTRARHRVWALFNKEN----------PSPFVEILKNLDV 678 RL YV LTRA+ +++ + PSPF+E+++ V Sbjct: 708 VRLFYVGLTRAKRKLFLCRAFKRQRFGRTVYADPSPFLEVIRESLV 753 >UniRef50_A0LFK0 ATP-dependent DNA helicase, Rep family n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LFK0_SYNFM Length = 620 Score = 342 bits (878), Expect = 3e-92, Method: Composition-based stats. Identities = 85/412 (20%), Positives = 153/412 (37%), Gaps = 58/412 (14%) Query: 192 VESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGR 251 + L+P Q AV + E +V AGAGSGKT L + +L+ PE+IL + F Sbjct: 1 MSMQSLSPVQMEAVSHVETPAIVTAGAGSGKTRTLTNKIAYLVNNLHYDPERILAITFTN 60 Query: 252 KAAEEMDERIRERLHTED---ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFI 308 KAA+EM R+ + RTFH+ I++ + + L A++ + + Sbjct: 61 KAADEMKSRLEKITGRSAGDFPWVRTFHSACFKILKVHCELLGYRKPLLIHDASQQKAHL 120 Query: 309 AEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGG 368 + + + + +++ + P + ++ RR Sbjct: 121 KKVLAELNLDRHYLFAAASLISKAKNSADPVLYLASNGRVPRR----------------- 163 Query: 369 AQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-- 426 + + L N+VDF ++ +L+K Sbjct: 164 ------------------------KEAYRIYNEMLAQSNSVDFDDILLLTRDLLQKYPEI 199 Query: 427 ---FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLT 483 + + + +ILVDEFQD + + ++ L K L VGDD+Q+IY+F GA Sbjct: 200 RKAYRNRFDYILVDEFQDSNEIQNQIIDLLLKDGR---LTVVGDDYQSIYQFRGANPFHF 256 Query: 484 TAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAV-TLLD 542 F + + + L+ +R +I ++R I N +++K S +G V T + Sbjct: 257 INFPQKYAKARVFRLEENFRSTRQIVTASDRLIAHNLQRIEKQCFSRRDGQPVTVETFYN 316 Query: 543 ESQLDALL-----DKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQI 589 E + + L+ P I IL R + + Sbjct: 317 EQMEAEWVADRCRELLNDENIPYREIAILYRTKFTSLPFERALRSAGVPYTM 368 Score = 108 bits (269), Expect = 9e-22, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 47/137 (34%), Gaps = 12/137 (8%) Query: 542 DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQ 601 D L+ L+ + + Y + + TIHA+KG + Sbjct: 487 DGDDLETRLENIKSMIYDAAGKASIPEYLEDAALIRDDQDETDNGNGVRLSTIHAAKGLE 546 Query: 602 ADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALF 661 V +V ++EG + E + EERRLMYVA+TRA + Sbjct: 547 FKAVFVVAVEEGILPHRKSIETESEIEL------ERGMEEERRLMYVAMTRASELLSLSA 600 Query: 662 NKE------NPSPFVEI 672 PSPF+ Sbjct: 601 AATRRGELARPSPFLAE 617 >UniRef50_C4R3W4 DNA helicase and DNA-dependent ATPase n=1 Tax=Pichia pastoris GS115 RepID=C4R3W4_PICPG Length = 802 Score = 342 bits (877), Expect = 3e-92, Method: Composition-based stats. Identities = 84/419 (20%), Positives = 164/419 (39%), Gaps = 33/419 (7%) Query: 194 SSPLNPAQARAVVNG-EHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRK 252 + LN Q AV L ++AG G+GKT VL +R +LL + P I++ F +K Sbjct: 2 LASLNSQQYEAVTADIHKPLQIIAGPGTGKTKVLTSRVAYLLIEHKIPPSNIIVTTFTKK 61 Query: 253 AAEEMDERIRERLHTE---------DITARTFHALALHIIQQGSKKVPIVSKLENDTAAR 303 AA EM ER++ E + TFH++ + ++++ ++ + K + Sbjct: 62 AANEMVERLQVLFAKENLDPDKYLKGLLIGTFHSICVKLLRRYGTQIGLTPKFKIADERD 121 Query: 304 HELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLM 363 +++ S+ + K ++ ++ P+ ++ S++ + SL Sbjct: 122 SNTILSKILTTLSDDVVRLKFHPSSVSVDIYQKDPKETDKLHGYDLKKAKSQISKLKSLT 181 Query: 364 RMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE 423 + S R +A + ++ +L+ N +DF + ++L Sbjct: 182 TTP-------------QTYSTTSARSFDLAVIYSLYQESLRKHNLIDFDDCLLYTYLLLS 228 Query: 424 KGRFISPW-----KHILVDEFQDISPQRAALLAALRK----QNSQTTLFAVGDDWQAIYR 474 + R KH+LVDEFQD + + LL L + QN + + VGD Q+IY Sbjct: 229 ETRKKGRVLLKELKHVLVDEFQDTNKIQMELLYLLGQCTDDQNFEDNVTVVGDSDQSIYM 288 Query: 475 FSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGD 534 F A S ++ + L YR S I + + + Q + +K L S + Sbjct: 289 FRNAVASNFENMIIHYQNCQEITLKENYRSTSNILNFSEQIMTQQKDRKQKSLRSQISHL 348 Query: 535 KKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMT 593 + + D ++ + L + A L +++ + ++ +T Sbjct: 349 NIPIVYVRTQNTFKEADHIASEVAKLGLMSGL-LTSYNDIAILLRSSFQSRVIEQSLVT 406 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 61/183 (33%), Gaps = 30/183 (16%) Query: 507 RIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLD-ESQLDALLDKLSGYAKPEERIL- 564 +I ++AN ++KK + L E L+ +L Y ++I+ Sbjct: 529 QIVQLAN------LKEIKKTPETSKGTHDSENALKAVEENLNEFKRQLIEYKPIIDQIIT 582 Query: 565 ---------------ILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVG 609 + S + K ++ TIH +KG + V I G Sbjct: 583 AEAGDTPLTTRDVLSSFLDSIDLYETSNNENKKDSKKGRVTISTIHGAKGLEWPVVFIPG 642 Query: 610 LQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPF 669 +G + P E+RR YVALTRA+ ++ KE +P+ Sbjct: 643 CTDGVIPSKWTLEDD-------GPDSSTNLDEDRRCFYVALTRAKSMLYLSSYKERSTPW 695 Query: 670 VEI 672 Sbjct: 696 SGE 698 >UniRef50_C6A914 DNA helicase II n=11 Tax=Bifidobacterium RepID=C6A914_BIFLB Length = 529 Score = 341 bits (876), Expect = 4e-92, Method: Composition-based stats. Identities = 100/537 (18%), Positives = 180/537 (33%), Gaps = 100/537 (18%) Query: 194 SSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKA 253 + L+ AQ A + + + ++A AG+GKT + R + A G P ++L + F KA Sbjct: 34 LATLDDAQRSAALAVDGPVRIIAVAGAGKTRTITRRIAYACASGVWDPTRVLAVTFSVKA 93 Query: 254 AEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313 A EM ER+ + A TFH+ AL +++ + + T + L + Sbjct: 94 ANEMRERLDALQVPRGVRASTFHSAALRQMREVWPDI-CEGPFPDVTEDKSALVAQALYR 152 Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373 + + ++ + + +D + A+ Sbjct: 153 FNGIRPKEQ----------------------PKQSVYEVGAEIDWCKVSLIT---AKNYA 187 Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGR-----FI 428 A A + + ++ + +DF+ ++ A +L+ Sbjct: 188 RVCAATHRTPPAGLEPGQFATVYEQYEAEKNSRFEIDFNDILLLACHVLDAFPDVAKRIR 247 Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488 + VDE+QD+SP + L+ N + VGD Q IY F+GA F + Sbjct: 248 RQIGWLTVDEYQDVSPLQHLLMTRWLGSNR--NICVVGDPAQTIYSFAGATSYYLEHFGK 305 Query: 489 NF-GEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKK-PLNSLTNGDKKAVTLLDESQL 546 F L+ YR S I ANR + + + L S + ++ + E+ Sbjct: 306 EFAPLTADIALNRDYRSVSPIVGYANRVLGGSAQRQDYIRLESGRGTGSRVMSRIYETDA 365 Query: 547 DA------LLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQID---------- 590 + ++ +L R + + ++ Sbjct: 366 AEAQAVARQISRILAQGGNASDCAVLTRVGGQQTLVAQALKQANIPYRLRRNMNWQSSAL 425 Query: 591 ---------------------------FMTIHASKGQQADYVIIVGLQEGSDGFPAAARE 623 TIHA+KG + +V ++GL EG + Sbjct: 426 AGTARQETAETSNAGVEQLGVEKGRVTISTIHAAKGLEYKHVFVIGLSEGLLPYK----- 480 Query: 624 SIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNK---------ENPSPFVE 671 P +D EERR++YVALTRA + F K S F++ Sbjct: 481 --------PQSDDGDVEEERRVLYVALTRAEDTLHLSFAKRSDSQTTYVRRLSRFLQ 529 >UniRef50_UPI000023F08A hypothetical protein FG08405.1 n=1 Tax=Gibberella zeae PH-1 RepID=UPI000023F08A Length = 1060 Score = 341 bits (875), Expect = 5e-92, Method: Composition-based stats. Identities = 77/387 (19%), Positives = 142/387 (36%), Gaps = 47/387 (12%) Query: 187 DFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILL 246 + LN AQ RAV + ++ +LAG GSGKT L +R WL+ R P +++ Sbjct: 3 SIVQDAILQSLNEAQRRAVTSTASTVAILAGPGSGKTHTLTSRVVWLIQRVGYRPSDVIV 62 Query: 247 LAFGRKAAEEMDERIRERLHTE---DITARTFHALALHIIQQGSKKVPIVSKLENDTAAR 303 F KAA EM ERI + L E I TFH++A + ++ + SK Sbjct: 63 ATFTVKAAREMKERIGKTLGEECEKKIVLGTFHSIARRYLSIYGNRIGLDSKFGIADDGD 122 Query: 304 HELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLM 363 I K+ + W+S Sbjct: 123 SRAIIQRICKRLKLNIEPQQA--------------------------------KSWISKE 150 Query: 364 RMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE 423 + G + K + + ++ L N +D+ L+ + + +L Sbjct: 151 KAKG------PDAMAPPPTQKGRKENPELRTCYEEYQAQLTRSNLLDYDDLLVKCVELLR 204 Query: 424 KGR-FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSL 482 +S + +L+DE+QD + + L+ + + + VGD Q+IY + A++ Sbjct: 205 DHPACVSNVQTVLIDEYQDTNGIQYELMKLFAQA--KQRITIVGDPDQSIYGWRSAEVKN 262 Query: 483 TTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL-- 540 + + L+ YR + I +V+ IQQ+ + KK L + + V Sbjct: 263 LFRLLREYPNTDEISLEENYRSSQSILDVSLTVIQQDTKRYKKVLLPVHTKGARPVLRSL 322 Query: 541 -LDESQLDALLDKLSGYAKPEERILIL 566 ++ + ++ ++ +L Sbjct: 323 KSSSAEGEWIVSEIKRAVMMFGDMLKF 349 Score = 93.5 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 25/90 (27%) Query: 590 DFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVA 649 TIHA+KG + V + + GS + EERRL+YVA Sbjct: 587 TISTIHAAKGLEWPVVFVPSVYTGSIPHSRSEDTD----------------EERRLLYVA 630 Query: 650 LTRARHRVWALFN---------KENPSPFV 670 +TRA+ ++ K SPFV Sbjct: 631 MTRAKALLYLSCPLYGSQGLSSKVELSPFV 660 >UniRef50_B5YD55 ATP-dependent DNA helicase n=2 Tax=Dictyoglomus RepID=B5YD55_DICT6 Length = 656 Score = 340 bits (873), Expect = 9e-92, Method: Composition-based stats. Identities = 86/418 (20%), Positives = 160/418 (38%), Gaps = 51/418 (12%) Query: 186 ADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQIL 245 +F ++E LN Q + V+ + LV+AG GSGKT +V R G+L+A G SP+ I+ Sbjct: 20 KEFLERIE-KDLNEEQRKVVLEADGPSLVIAGPGSGKTRTIVYRVGYLVALG-YSPKNIM 77 Query: 246 LLAFGRKAAEEMDERIRERLHT--EDITARTFHALALHIIQQGSKKVPIVSKLENDTAAR 303 LL F +AA M R + + E+I TFH + I++ K + I + Sbjct: 78 LLTFTNQAARHMINRTQALIRESIEEIWGGTFHHVGNRILRVYGKIIGINEQYNILDRED 137 Query: 304 HELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLM 363 I E ++ ++ KG L + + K + + Sbjct: 138 SLDLIDECLEELFPEENLGKGILGELFSYKVNTGKNWDEVLKIKAPQII----------- 186 Query: 364 RMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE 423 +I+++ + + ++ + N +D+ L+ +L Sbjct: 187 -----------------------DKIEIVQKVFERYEKRKRELNVLDYDDLLFFWYRLLL 223 Query: 424 KGR-----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGA 478 + + +ILVDE+QD + + ++ + + VGDD Q+IY F GA Sbjct: 224 ESEKTRKILNDRFLYILVDEYQDTNWLQGEIIRL--TREENKNILVVGDDAQSIYSFRGA 281 Query: 479 QMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAV 538 + +F E F L YR I +AN I++N Q K + + K Sbjct: 282 TIENILSFPEIFPGTRIFYLVFNYRSTPEIINLANEIIKRNTRQYFKEIKPVLKSGSKPK 341 Query: 539 TLL------DESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQID 590 + + + ++ +L + I +L R ++ A + + ++ Sbjct: 342 LVWVRDDEEEAQFVVEVIKELHKEGVKYKDIGVLFRSNYHSMAVQMELTLQGIPYEVR 399 Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 52/147 (35%), Gaps = 27/147 (18%) Query: 540 LLDESQLDALLDKLSGYAKPEERILILAR--YHHMRPASLEKAATRWPKLQIDFMTIHAS 597 D + +D+L ++ + + + K + TIH + Sbjct: 511 YPDFKDREKDVDQLILLSERYDDLEKFLSELTLYTYAGEKLLEEEEEEKDFVVLSTIHQA 570 Query: 598 KGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRV 657 KG + V I+ L +G FP+ + EERRL YVA+TRA+ + Sbjct: 571 KGLEWHAVFILRLVQG--DFPSYKSMDNI-------------EEERRLFYVAVTRAKREL 615 Query: 658 WALFNKEN----------PSPFVEILK 674 + + PS F+E L Sbjct: 616 YVITYLTRKVKDMNVFTKPSIFLEELP 642 >UniRef50_A8ZTY6 UvrD/REP helicase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZTY6_DESOH Length = 616 Score = 340 bits (873), Expect = 9e-92, Method: Composition-based stats. Identities = 90/406 (22%), Positives = 148/406 (36%), Gaps = 56/406 (13%) Query: 196 PLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAE 255 L+P Q AV++ LV AGAGSGKT L A+ L+ PE+IL + F KAA+ Sbjct: 4 KLSPQQEAAVLHMGSPALVTAGAGSGKTRTLTAKIAHLI-SLGYPPERILAITFTNKAAD 62 Query: 256 EMDERIRERLHTED---ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWR 312 EM R+ + RT+H+ I+ + + L+ I + Sbjct: 63 EMKRRLVALTGIPETGFPWVRTYHSACYKILCVHCGLLGYTTPLQIYDTYHQRKTITDVL 122 Query: 313 KQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAE 372 D+K + + + + + Sbjct: 123 ---------------------------IRMNHDKKFVPTILNHISKAKNS---------- 145 Query: 373 MIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-----RF 427 + + +A + ++ LK +NAVDF ++ IL R+ Sbjct: 146 --GNPGAYLDAYPFISYVRLADAYELYERMLKEKNAVDFDNILLCVRDILRDHDDVRRRY 203 Query: 428 ISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFH 487 ++ ILVDE+QD + + L L + + LF VGDDWQAIY F G+ M +F Sbjct: 204 QERFEFILVDEYQDTNNLQEDLTGLLCRGD---NLFCVGDDWQAIYSFRGSNMRHFLSFE 260 Query: 488 ENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLD 547 + + + L+ YR I VAN I N ++ K S +G + D+ + Sbjct: 261 QRYADARVFKLEQNYRSADTIVRVANDIIDYNHDKMDKTCFSEESGGTVEIYEFDDEVEE 320 Query: 548 AL-----LDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQ 588 A ++L+ P + + +L R Sbjct: 321 ARWVARKAEELNEDGVPYDAMAVLYRTKFTSLYFEHAFRRAGIPYH 366 Score = 96.2 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 44/133 (33%), Gaps = 18/133 (13%) Query: 548 ALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVII 607 ++ + R+ L Y E ++ TIHA+KG + V + Sbjct: 493 EKVENIDQLISAAARMESLTAYLEEAALIREDKDDEEGGFGVNLATIHAAKGLEFHTVFV 552 Query: 608 VGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNK---- 663 VG +E + E + RRLMYVA TRA ++ Sbjct: 553 VGCEENLLPHWKSLEEEDDLQEE------------RRLMYVAATRAARCLFLTAAGFRKG 600 Query: 664 --ENPSPFVEILK 674 S F+ ++ Sbjct: 601 QFNRRSRFLFEIE 613 >UniRef50_A5WC18 UvrD/REP helicase n=2 Tax=Psychrobacter RepID=A5WC18_PSYWF Length = 742 Score = 340 bits (871), Expect = 1e-91, Method: Composition-based stats. Identities = 110/490 (22%), Positives = 186/490 (37%), Gaps = 65/490 (13%) Query: 122 REQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEAM 181 R++ + +QQ I + S L P + + N + + D SA HN + + Sbjct: 21 RQKMAHLQQSIAKLESNLIAPESMDKRLSNTVYDDKVADQKIADKHSA--PHNSVLSSSE 78 Query: 182 LTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASP 241 + + LNP+Q A E +LV+AGAGSGKT L R +L+ G ASP Sbjct: 79 VDYAGE---------LNPSQLLAATTTEGKVLVIAGAGSGKTKTLTYRTSYLIESG-ASP 128 Query: 242 EQILLLAFGRKAAEEMDERIRERLHT-------------EDITARTFHALALHIIQQGSK 288 ILLL F RKAA E+ R++ L IT+ TFH+ ++++ S Sbjct: 129 SSILLLTFTRKAANEIKGRVKSLLAESLADNRALSGLDLNAITSGTFHSFCNMLLRRYSG 188 Query: 289 KVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKL 348 + I K E + K+ + K F + L Sbjct: 189 LLGINPKFTILDTGDSEDALDMICKEQGIVRKNMK----------------QAFPRKKTL 232 Query: 349 QRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENA 408 Q +++ +R + ++ E + I L+ L A+ +A + Sbjct: 233 QNLISTSRNRHI------------LLRDLIENDYPDIAIHIPLIEDLAMAYHKYKRANHL 280 Query: 409 VDFSGLIHQAIVILEKGR-----FISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLF 463 DF +I Q + L+ ++H++VDE+QD + + L+ L + +L Sbjct: 281 YDFDDIISQVVYHLKNNLQFRKLIQDTYRHVMVDEYQDTNIPQKQLIDYLCEP-DNVSLM 339 Query: 464 AVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQL 523 VGDD Q+IY F GA F + + + + L+ YR I + N + Sbjct: 340 VVGDDNQSIYAFRGANYENILLFADGYPDAKLIKLEQNYRSTPAILDYVNALSEHITLGY 399 Query: 524 KKPLNSLTNGDKKAVTLL----DESQLDALLDKLSGYAKPEER--ILILARYHHMRPASL 577 +K L S + + TL D+ + + DK+ + +L+R Sbjct: 400 QKKLFSNLAIEGEKPTLCRRSNDKQEAVYIADKIIELKPEYDFNDFAVLSRTSFQSNEIQ 459 Query: 578 EKAATRWPKL 587 + R Sbjct: 460 LQFMQRNIPF 469 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 31/203 (15%), Positives = 67/203 (33%), Gaps = 31/203 (15%) Query: 497 DLDTTYRFNSRIGEVANRFIQ-QNPGQLKKPLNSLTNGDKKAVTLLDESQLDAL------ 549 L + I E+ + I+ Q + L +L + + L+++ + Sbjct: 538 KLTKN---KAPINELYHVLIKAQQQATVADILQTLIDFYAPILKTLEDNWRERSEDFRVL 594 Query: 550 LDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVG 609 ++ ++ + + LA ++ + TIH++KG + V + Sbjct: 595 INLAQEHSSLDNFLENLALDPPNDSVAVMTNPEDKQTDAVTISTIHSAKGLEWPVVFVNA 654 Query: 610 LQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNK------ 663 L +G + E EER+L YVA +RA+ ++ Sbjct: 655 LVDGLMPHHRSL------------HEFEALEEERKLFYVACSRAKTHLYLTAPDYFSSFA 702 Query: 664 ---ENPSPFVEILKNLDVPVARK 683 + S F+ + + V Sbjct: 703 GYFDKISRFISEVATDTLQVDAA 725 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.142 0.447 Lambda K H 0.267 0.0435 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,843,163,459 Number of Sequences: 3077464 Number of extensions: 188245740 Number of successful extensions: 603533 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 3887 Number of HSP's successfully gapped in prelim test: 2988 Number of HSP's that attempted gapping in prelim test: 566142 Number of HSP's gapped (non-prelim): 19972 length of query: 684 length of database: 1,040,396,356 effective HSP length: 136 effective length of query: 548 effective length of database: 621,861,252 effective search space: 340779966096 effective search space used: 340779966096 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 97 (41.9 bits)