11 d1pjra1 Probab=100.00  E-value=4.3e-32  Score=252.41  Aligned_columns=307  Identities=26%

Q ss_pred             HHHHHCCCCCCCHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHEEEECCCHHHHHHHHHHHHHHCC
Q ss_conf             65431245789989999972478873562289863679999999999981899966688974698999999999998628
Q batch____       187 DFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLH  266 (684)
Q Consensus       187 ~~~~~~e~~~L~~~Q~~Av~~~~~~~LV~agaGTGKT~tlv~ri~~Ll~~~~~~~~~ILilaftn~A~dei~~Ri~~~~~  266 (684)
                      +|....--+.||++|++||.+..++.||+||||||||+|+++++.+|+.++..++++||++||||.|++++.+|+.+...
T Consensus         2 ~~~~~~i~~~L~~~Q~~~I~~~~~~~lI~G~pGTGKT~~l~~~i~~ll~~~~~~~~~iL~lt~s~~a~~~~~~r~~~~~~   81 (315)
T d1pjra1           2 NFLSEQLLAHLNKEQQEAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKAAREMRERVQSLLG   81 (315)
T ss_dssp             CHHHHHHHTTSCHHHHHHHHCCSSCEEEEECTTSCHHHHHHHHHHHHHHTTCCCGGGEEEEESSHHHHHHHHHHHHHHHG
T ss_pred             CHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHEEEECCCHHHHHHHHHHHHHHHC
T ss_conf             81478988412899999996689978998389987879999999999980899976777871698999989887887511


Q ss_pred             --CCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             --578699629999999998655745877665307889999999999998640410147899888876620000123210
Q batch____       267 --TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWD  344 (684)
Q Consensus       267 --~~~i~v~T~hs~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (684)
                        .+.+.+.|+|+|+..+.+...............+......+.....................................
T Consensus        82 ~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (315)
T d1pjra1          82 GAAEDVWISTFHSMCVRILRRDIDRIGINRNFSILDPTDQLSVMKTILKEKNIDPKKFEPRTILGTISAAKNELLPPEQF  161 (315)
T ss_dssp             GGGTTSEEEEHHHHHHHHHHHHGGGGTCCTTCEECCHHHHHHHHHHHHHTTSCTTTTCCHHHHHHHHHHHHHTTCCHHHH
T ss_pred             CCCCCCEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHH
T ss_conf             33466302129999999977647861876664326958999999999874277722267899999999998612796675


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC
Q ss_conf             03689999999999997402332013788761003347889999999999999999999987898857999999998612
Q batch____       345 DEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEK  424 (684)
Q Consensus       345 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~d~i~~a~~~l~~  424 (684)
                      ...............                                       +..........+..+.+..+..++..
T Consensus       162 ~~~~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (315)
T d1pjra1         162 AKRYYEKVVSDVYQE---------------------------------------YQQRLLRNHSLDFDDLIMTTIQLFDR  202 (315)
T ss_dssp             TTCCHHHHHHHHHHH---------------------------------------HHHHHHHTTEECTTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH---------------------------------------HHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf             554544333321123---------------------------------------56776530456636899999999632


Q ss_pred             C-----CHHCCCCEEEHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHCCHHHHHHHHHHCCCCEEEEEC
Q ss_conf             7-----40102721210454069989999999872128997699953611054401103602345678855997399823
Q batch____       425 G-----RFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLD  499 (684)
Q Consensus       425 ~-----~~~~~~~~i~vDe~qd~~~~~~~l~~~L~~~~~~~~L~~vGD~~Q~i~~~~~~~~~~~~~~~~~~~~~~~~~L~  499 (684)
                      .     .....|+++++||+||+++.++.++..|......  ++++||+.|.||++++++...+..+.+.+.......|.
T Consensus       203 ~~~~~~~~~~~~~~i~vDe~Qd~~~~q~~ll~~l~~~~~~--l~l~GD~~Q~i~~~~~~~~~~~~~l~~~~~~~~~~~L~  280 (315)
T d1pjra1         203 VPDVLHYYQYKFQYIHIDEYQDTNRAQYTLVKKLAERFQN--ICAVGDADQSIYRWRGADIQNILSFERDYPNAKVILLE  280 (315)
T ss_dssp             CHHHHHHHHHHCSEEEESSGGGCCHHHHHHHHHHHTTTCC--EEEEECGGGCCCGGGTCCTHHHHTHHHHSTTCEEEEEC
T ss_pred             HHHHHHHHCCCCCEEECHHHHCCCHHHHHHHHHHHCCCCE--EEEEECCCCCCHHHCCCCHHHHHHHHHHCCCCEEEEEC
T ss_conf             8999985102483562013540998999999997246986--99980333182000499989999999844896699968


Q ss_pred             CCCCCCHHHHHHHHHHHHHCHHHCCCCCCCCCCCC
Q ss_conf             34688789999999997516111025532556667
Q batch____       500 TTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGD  534 (684)
Q Consensus       500 ~~yR~~~~I~~~a~~~i~~~~~~~~~~~~~~~~~~  534 (684)
                      .||||+++|++++|+++.+|..+..+++.+...++
T Consensus       281 ~nyR~~~~I~~~~n~l~~~n~~~~~k~i~~~~~~~  315 (315)
T d1pjra1         281 QNYRSTKRILQAANEVIEHNVNRKPKRIWTENPEG  315 (315)
T ss_dssp             BCSSSCHHHHHHHHHHHTTCSSCCCCCCBCSSCCC
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCC
T ss_conf             65588789999999999724000685063347999