163 c1vmaA_ Probab=96.75   E-value=0.0032  Score=38.34  Aligned_columns=132  Identities=19%

Q ss_pred             CCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             24347879978999879998889999999668748764799931615300010000012222232233222210001221
Q batch____        19 DLNLNFQEGSFSVLIGTSGSGKSTTLKMINRLVEHDSGEIRFAGEEIRSLPVLELRRRMGYAIQSIGLFPHWSVAQNIAT   98 (308)
Q Consensus        19 ~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~~~~   98 (308)
                      .+.+.-.+..+++++|++|+||||++-=|+..+.-..-++.+-..|..+.                              
T Consensus        84 ~~~~~~~~~~vi~~~Gp~G~GKTTt~aklA~~~~~~g~~v~li~~D~~R~------------------------------  133 (294)
T c1vmaA_          84 KLNVPPEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRA------------------------------  133 (294)
T ss_dssp             CCCCCSSSCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTTCH------------------------------
T ss_pred             CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCH------------------------------
T ss_conf             00235789669999806887602489999999996799489997587686------------------------------


Q ss_pred             HHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEE-------------------
Q ss_conf             2102366347888741124431000000112342334432101664201234433104433-------------------
Q batch____        99 VPQLQKWSRARIDDRIDELMALLGLESNLRERYPHQLSGGQQQRVGVARALAADPQVLLMD-------------------  159 (308)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~lS~g~~~rv~la~al~~~p~ililD-------------------  159 (308)
                                ...++...+.+.+++ +......+.++..-.++.+..++  ..+-+++|+|                   
T Consensus       134 ----------gA~eQL~~~a~~~~v-~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~IlIDTaGr~~~d~~~~~el~~~~  200 (294)
T c1vmaA_         134 ----------AAIEQLKIWGERVGA-TVISHSEGADPAAVAFDAVAHAL--ARNKDVVIIDTAGRLHTKKNLMEELRKVH  200 (294)
T ss_dssp             ----------HHHHHHHHHHHHHTC-EEECCSTTCCHHHHHHHHHHHHH--HTTCSEEEEEECCCCSCHHHHHHHHHHHH
T ss_pred             ----------HHHHHHHHHHHHHCC-EEEECCCCCCHHHHHHHHHHHHH--HCCCCEEEECCCCCCCCCHHHHHHHHHHH
T ss_conf             ----------479999999976198-28974883698999999999999--77998999818889878579999999999


Q ss_pred             ------------CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf             ------------1444788789999999999999730875389834
Q batch____       160 ------------EPFGALDPVTRGALQQEMTRIHRLLGRTIVLVTH  193 (308)
Q Consensus       160 ------------Ept~~lD~~~~~~~~~~l~~l~~~~g~tvi~vtH  193 (308)
                                  +..--+|..+.......+....+..+.+-++.|+
T Consensus       201 ~~~~~~~~~~p~~~~LVl~a~~~~~~~~~~~~~~~~~~~~~iIlTK  246 (294)
T c1vmaA_         201 RVVKKKIPDAPHETLLVIDATTGQNGLVQAKIFKEAVNVTGIILTK  246 (294)
T ss_dssp             HHGGGTCTTCCSEEEEEEEGGGHHHHHHHHHHHHHHSCCCEEEEEC
T ss_pred             HHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEC
T ss_conf             9963035668853999811468789999999996308997699974