2 c3rfaA_ Probab=99.87   E-value=5.2e-21  Score=154.04  Aligned_columns=282  Identities=15%

Q ss_pred             CHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCEEEEECCCHHHCCCCCCCCC
Q ss_conf             23389999998599899998709997898788887641147558889997517788137046344178888043622223
Q batch____        12 REDWLTQLADVVTDPDELLRLLNIDAEEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDEFVIAPGFST   91 (342)
Q Consensus        12 ~~~w~~~~~~~i~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~v~~~~~~li~~~~~~dpi~~q~~p~~~e~~~~~~~~~   91 (342)
                      ++-|+|..++.+.+.+++...    +.+....+..........+..+..|       .|.-.+..+-.            
T Consensus        27 ~qi~~~~~~~~~~~~~~~~~l----~~~~r~~l~~~~~~~~~~~~~~~~~-------~dgt~k~~~~~------------   83 (333)
T c3rfaA_          27 DQVMKWMYHYCCDNFDEMTDI----NKVLRGKLKEVAEIRAPEVVEEQRS-------SDGTIKWAIAV------------   83 (333)
T ss_dssp             HHHHHHHHHSCCCCGGGCTTS----CHHHHHHHHHHEECCCCEEEEEEEC-------TTSCEEEEEEE------------
T ss_pred             HHHHHHHHHCCCCCHHHCCCC----CHHHHHHHHHHCCCCCCCEEEEEEC-------CCCCEEEEEEC------------
T ss_conf             999998630027997682436----9899999975015677631377632-------78804799984------------


Q ss_pred             CCCCCCCCCCCCCEEEECCEEEEEECC--CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH--------HCCCCCEEE
Q ss_conf             445543277997066209979999558--8788371663776787667789899999999999--------578986999
Q batch____        92 DPLEEQHSVVPGLLHKYHNRALLLVKG--GCAVNCRYCFRRHFPYAENQGNKRNWQTALEYVA--------AHPELDEMI  161 (342)
Q Consensus        92 d~~~~~~~~~~gl~hrY~~rvll~vT~--~C~~~CryC~r~~~~~~~~~~~~e~i~~~i~~i~--------~~~~i~eVv  161 (342)
                          +|+. ++.+.-.|++|..+++++  ||+++|+||........++..+.|.+++.+...+        ....+++|+
T Consensus        84 ----~d~~-ie~v~i~~~~r~t~cissqvGC~~~C~FC~t~~~g~~R~ls~~EIv~qv~~~~~~~~~~~~~~~~~i~~vv  158 (333)
T c3rfaA_          84 ----GDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVV  158 (333)
T ss_dssp             ----TTEE-EEEEEEECSSCEEEECCCEEECSSCCTTCGGGTTCEEEECCHHHHHHHHHHHHHHHCCHHHHSSCSCSEEE
T ss_pred             ----CCCC-EEEEEEEECCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
T ss_conf             ----8884-87988763890389972675753667034112448501358899999999999864143320355421257


Q ss_pred             EECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHCHHHCCHHHHHHHHHCCCCEEEEECCCCC------------
Q ss_conf             96487466786889999998630578547999727210186633989998776359848999335762------------
Q batch____       162 FSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPIVIPARITEALVECFARSTLQILLVNHINHA------------  229 (342)
Q Consensus       162 ltGGdPl~~~~~~l~~ll~~l~~i~~v~~Iri~T~~~~~~P~ri~~~ll~~l~~~~~~i~~~~h~~h~------------  229 (342)
                      ++|++.++++.+.+.++++.+.+..++.   ++++.+.+.+..+.+.+..........+.+++|.-.+            
T Consensus       159 ~~g~GEPl~n~~~v~~~l~~l~~~~gl~---i~~~~itvst~g~~~~i~~L~~~~~~~l~isl~a~~~e~r~~l~p~~k~  235 (333)
T c3rfaA_         159 MMGMGEPLLNLNNVVPAMEIMLDDFGFG---LSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKK  235 (333)
T ss_dssp             ECSSSCGGGCHHHHHHHHHHHHSTTTTC---CCGGGEEEEESCCHHHHHHHHHHCCCEEEEECCCSSHHHHHHHSGGGGT
T ss_pred             EECCCCCCCCHHHHHHHHHHHHHCCCEE---EECCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHEECCCC
T ss_conf             5058632249899999999852115524---3011210157554178999873158489980677987786231406788


Q ss_pred             ---HHCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHH
Q ss_conf             ---00578999999999986984999862202868999999999999997897899967127888764002669999999
Q batch____       230 ---NEVDETFRQAMAKLRRVGVTLLNQSVLLRDVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQI  306 (342)
Q Consensus       230 ---~eit~~~~~ai~~l~~~G~~V~~qtvLl~GvND~~e~l~~L~~~L~~~gV~pyyl~~~~~~~G~~~f~~~~~~~~~i  306 (342)
                         .++.+.+.+.++...+.|+.|.+++++++|+||+.+++.+|++.+..++++. .+..+.|.+|+.+-+.+.++..++
T Consensus       236 ~~l~~i~~~~~~~~~~~~~~g~~v~i~y~li~g~nDs~e~a~~l~~~l~~~~~~V-nlip~nP~~g~~~~~p~~e~i~~f  314 (333)
T c3rfaA_         236 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKI-NLIPWNPFPGAPYGRSSNSRIDRF  314 (333)
T ss_dssp             SCHHHHHHHHHHHHHHCTTTTTCEEEEEEEBTTTTCSHHHHHHHHHHTTTSCEEE-EEEECCCCTTCCCCBCCHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEE-EEEECCCCCCCCCCCCCHHHHHHH
T ss_conf             8999999999999997764398089985540899989899999999985089879-999624688888778898999999


Q ss_pred             HHHHHHHCCCCCCCEEEEECCCC
Q ss_conf             99999858887662388866889
Q batch____       307 MRELLTLVSGYLVPKLAREIGGE  329 (342)
Q Consensus       307 ~~~l~~~lsG~~~P~~V~d~pg~  329 (342)
                      .+.|+..    .++..|+..-|.
T Consensus       315 ~~~L~~~----Gi~v~iR~~~g~  333 (333)
T c3rfaA_         315 SKVLMSY----GFTTIVRKTRGD  333 (333)
T ss_dssp             HHHHHHT----TCEEEECCCCCC
T ss_pred             HHHHHHC----CCEEEEEEECCC
T ss_conf             9999978----986997641489