54 c3fluD_ Probab=43.70   E-value=23  Score=15.78  Aligned_columns=135  Identities=10%

Q ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCCEEEEEC--CCCCCCCHHHHHHHHHHHHCC-CCCCEEEEECCCCHHCHHHCCHHHH
Q ss_conf             7667789899999999999578986999964--874667868899999986305-7854799972721018663398999
Q batch____       134 YAENQGNKRNWQTALEYVAAHPELDEMIFSG--GDPLMAKDHELDWLLTQLEAI-PHIKRLRIHSRLPIVIPARITEALV  210 (342)
Q Consensus       134 ~~~~~~~~e~i~~~i~~i~~~~~i~eVvltG--GdPl~~~~~~l~~ll~~l~~i-~~v~~Iri~T~~~~~~P~ri~~~ll  210 (342)
                      ..++....+.+.+.++++.+. |+.-+.+.|  ||-..++.+.-.++++...+. ++-..|-.++.+....-..   ++.
T Consensus        16 ~~dg~iD~~~~~~~~~~l~~~-Gv~gi~~~G~tGE~~~Ls~~Er~~i~~~~~~~~~~~~~vi~gv~~~~~~~~i---~~a   91 (293)
T c3fluD_          16 NQDGSIHYEQLRDLIDWHIEN-GTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAI---ALS   91 (293)
T ss_dssp             CTTSCBCHHHHHHHHHHHHHT-TCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHH---HHH
T ss_pred             CCCCCCCHHHHHHHHHHHHHC-CCCEEEECCCCCCHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHH---HHH
T ss_conf             898884889999999999977-9989998772357021799999999999999608997399965889999999---999


Q ss_pred             HHHHHCCCCEEEEECCCCCHHCCHHHHHHHHHHHHC-CCEEEEE-EEEECCCCCCHHHHHHHHH
Q ss_conf             877635984899933576200578999999999986-9849998-6220286899999999999
Q batch____       211 ECFARSTLQILLVNHINHANEVDETFRQAMAKLRRV-GVTLLNQ-SVLLRDVNDNAQTLANLSN  272 (342)
Q Consensus       211 ~~l~~~~~~i~~~~h~~h~~eit~~~~~ai~~l~~~-G~~V~~q-tvLl~GvND~~e~l~~L~~  272 (342)
                      +.....+....+.......+.-.+++.+-.+.+.++ ++++.+. ..-..|+.=+.+.+.+|++
T Consensus        92 ~~a~~~Gad~v~~~pP~~~~~s~~~i~~~~~~ia~~~~~pi~~Yn~P~~tg~~~s~~~~~~L~~  155 (293)
T c3fluD_          92 QAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLAE  155 (293)
T ss_dssp             HHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCCSCEEEEECHHHHSSCCCHHHHHHHTT
T ss_pred             HHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHC
T ss_conf             9998549989999388788999889999999999754998999967533367759899999834