BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (285 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_D2AGN5 Transcriptional regulator, RpiR family n=1 Tax=S... 514 e-144 UniRef50_A9MIE1 HTH-type transcriptional regulator murR n=48 Tax... 468 e-130 UniRef50_A0KFB6 Transcriptional regulator, RpiR family n=3 Tax=G... 234 2e-60 UniRef50_B5FDJ7 Transcriptional regulator, RpiR family protein n... 228 1e-58 UniRef50_UPI000197C448 transcriptional regulator n=1 Tax=Provide... 226 7e-58 UniRef50_A1JQZ2 RpiR family regulatory protein n=12 Tax=Enteroba... 216 6e-55 UniRef50_Q9CKN4 Putative uncharacterized protein n=1 Tax=Pasteur... 214 2e-54 UniRef50_A5L3V2 Transcriptional regulator, RpiR family protein n... 168 2e-40 UniRef50_A0ZNS9 Putative uncharacterized protein n=3 Tax=Photoba... 164 3e-39 UniRef50_C3WE65 Transcriptional regulator n=5 Tax=Fusobacterium ... 162 1e-38 UniRef50_P37767 Uncharacterized HTH-type transcriptional regulat... 159 8e-38 UniRef50_A1HSQ6 Transcriptional regulator, RpiR family n=1 Tax=T... 157 6e-37 UniRef50_Q8R7I8 Transcriptional regulator n=3 Tax=Firmicutes Rep... 149 1e-34 UniRef50_B8E0M8 Transcriptional regulator, RpiR family n=2 Tax=D... 145 1e-33 UniRef50_Q28KP3 Transcriptional regulator, RpiR family n=6 Tax=A... 145 1e-33 UniRef50_A7GD47 Transcriptional regulator, RpiR family n=10 Tax=... 145 2e-33 UniRef50_Q15N75 Transcriptional regulator, RpiR family n=1 Tax=P... 143 7e-33 UniRef50_C7MQM6 Transcriptional regulator, RpiR family n=5 Tax=A... 143 7e-33 UniRef50_D1YCB1 Transcriptional regulator, RpiR family n=3 Tax=P... 143 8e-33 UniRef50_C5CIM2 Transcriptional regulator, RpiR family n=1 Tax=K... 142 9e-33 UniRef50_Q8RD36 Uncharacterized HTH-type transcriptional regulat... 142 9e-33 UniRef50_A9KMQ5 Transcriptional regulator, RpiR family n=1 Tax=C... 142 1e-32 UniRef50_C7REF2 Transcriptional regulator, RpiR family n=2 Tax=A... 141 3e-32 UniRef50_UPI0001BC57B3 oxygen-independent coproporphyrinogen III... 140 3e-32 UniRef50_B0N1V0 Putative uncharacterized protein n=2 Tax=Bacteri... 140 7e-32 UniRef50_C6Q8T9 Transcriptional regulator, RpiR family n=1 Tax=T... 140 7e-32 UniRef50_A4F6M8 RpiR-family transcriptional regulator n=7 Tax=Ac... 139 9e-32 UniRef50_C8NZR0 RpiR family transcriptional regulator n=1 Tax=Er... 138 2e-31 UniRef50_C5B7U9 Transcriptional regulator, RpiR family protein n... 137 3e-31 UniRef50_A6LUR0 Transcriptional regulator, RpiR family n=2 Tax=C... 137 4e-31 UniRef50_A8RRF4 Putative uncharacterized protein n=5 Tax=Clostri... 137 6e-31 UniRef50_C4V1J5 RpiR family transcriptional regulator n=1 Tax=Se... 136 1e-30 UniRef50_C0ZD50 Transcriptional regulator n=32 Tax=Bacillales Re... 136 1e-30 UniRef50_C6WFA6 Transcriptional regulator, RpiR family n=2 Tax=A... 135 2e-30 UniRef50_C0CSK7 Putative uncharacterized protein n=1 Tax=Blautia... 133 7e-30 UniRef50_C0ZJF9 Transcriptional regulator n=1 Tax=Brevibacillus ... 132 1e-29 UniRef50_Q97MK5 Uncharacterized HTH-type transcriptional regulat... 132 1e-29 UniRef50_A6LRF3 Transcriptional regulator, RpiR family n=2 Tax=B... 132 2e-29 UniRef50_P26833 Uncharacterized HTH-type transcriptional regulat... 131 3e-29 UniRef50_C4L752 Transcriptional regulator, RpiR family n=4 Tax=B... 131 3e-29 UniRef50_C1I531 Transcriptional regulator n=1 Tax=Clostridium sp... 131 3e-29 UniRef50_C0Z7S3 Transcriptional regulator n=1 Tax=Brevibacillus ... 130 5e-29 UniRef50_A6LVH8 Transcriptional regulator, RpiR family n=8 Tax=F... 129 1e-28 UniRef50_C2D9G3 RpiR family transcriptional regulator n=1 Tax=At... 129 1e-28 UniRef50_C4KZ09 Transcriptional regulator, RpiR family n=85 Tax=... 129 2e-28 UniRef50_B1QW74 Transcriptional regulator n=2 Tax=Clostridium bu... 128 2e-28 UniRef50_C9AZQ1 Phosphosugar isomerase transcriptional regulator... 127 3e-28 UniRef50_A8RI47 Putative uncharacterized protein n=1 Tax=Clostri... 126 8e-28 UniRef50_A8FJ30 Possible RpiR family transcriptional regulator n... 126 9e-28 UniRef50_UPI000197BCAC RpiR family transcriptional regulator n=1... 126 1e-27 UniRef50_C1PDB4 Transcriptional regulator, RpiR family n=1 Tax=B... 124 3e-27 UniRef50_UPI000196C511 hypothetical protein CATMIT_02677 n=1 Tax... 124 4e-27 UniRef50_C8W838 Transcriptional regulator, RpiR family n=1 Tax=A... 124 5e-27 UniRef50_D0GPL3 Transcriptional regulator, RpiR family n=1 Tax=L... 123 7e-27 UniRef50_A4VXR0 Transcriptional regulator n=5 Tax=Streptococcus ... 123 7e-27 UniRef50_UPI0001789683 transcriptional regulator, RpiR family n=... 123 9e-27 UniRef50_A1AYM0 Transcriptional regulator, RpiR family n=3 Tax=P... 122 1e-26 UniRef50_P44540 Uncharacterized HTH-type transcriptional regulat... 122 1e-26 UniRef50_B4EZY5 RpiR-family transcriptional regulator n=54 Tax=G... 122 1e-26 UniRef50_D2AR91 Putative transcriptional regulator, RpiR family ... 120 7e-26 UniRef50_UPI000196C77F hypothetical protein CATMIT_02718 n=1 Tax... 120 7e-26 UniRef50_Q184N2 Putative phosphosugar-binding transcriptional re... 119 2e-25 UniRef50_B5HLI6 RpiR-family transcriptional regulator n=3 Tax=St... 118 3e-25 UniRef50_C6J1X3 RpiR family transcriptional regulator n=2 Tax=Ba... 117 3e-25 UniRef50_C3RKW6 Sugar isomerase n=3 Tax=Bacteria RepID=C3RKW6_9MOLU 117 4e-25 UniRef50_A8LV24 Transcriptional regulator, RpiR family n=7 Tax=A... 117 5e-25 UniRef50_A8RWE9 Putative uncharacterized protein n=1 Tax=Clostri... 117 5e-25 UniRef50_C6XNZ1 Transcriptional regulator, RpiR family n=1 Tax=H... 117 5e-25 UniRef50_C0R285 Transcriptional regulator n=1 Tax=Brachyspira hy... 117 5e-25 UniRef50_UPI0001788119 transcriptional regulator, RpiR family n=... 117 6e-25 UniRef50_C5C2G7 Transcriptional regulator, RpiR family n=1 Tax=B... 116 7e-25 UniRef50_D1AK74 Transcriptional regulator, RpiR family n=1 Tax=S... 116 9e-25 UniRef50_UPI00016945F6 hypothetical protein Plarl_13824 n=1 Tax=... 115 1e-24 UniRef50_C9L6X6 Transcriptional regulator, RpiR family n=1 Tax=B... 115 1e-24 UniRef50_Q9K6Z8 Transcriptional regulator (Hex regulon repressor... 115 1e-24 UniRef50_B9K581 Transcriptional repressor of rpiB expression; tr... 115 2e-24 UniRef50_A8S9N1 Putative uncharacterized protein n=3 Tax=Bacteri... 114 3e-24 UniRef50_A4EAC5 Putative uncharacterized protein n=2 Tax=Collins... 114 4e-24 UniRef50_B4SHK0 Transcriptional regulator, RpiR family n=3 Tax=S... 114 4e-24 UniRef50_D1ALE3 Transcriptional regulator, RpiR family n=1 Tax=S... 114 5e-24 UniRef50_C2JLW7 Bifunctional RpiR family transcriptional regulat... 114 5e-24 UniRef50_B2TJ91 Transcriptional regulator, RpiR family n=1 Tax=C... 114 5e-24 UniRef50_Q03YQ8 Transcriptional regulator n=4 Tax=Leuconostocace... 114 6e-24 UniRef50_B9CM70 Transcriptional regulator, RpiR family n=1 Tax=A... 113 7e-24 UniRef50_Q2G836 Transcriptional regulator, RpiR family n=4 Tax=P... 113 8e-24 UniRef50_Q38YX9 Gluconate operon transcriptional regulator, RpiR... 113 8e-24 UniRef50_UPI0001693BD8 YbbH n=1 Tax=Paenibacillus larvae subsp. ... 112 1e-23 UniRef50_B1YJ20 Transcriptional regulator, RpiR family n=1 Tax=E... 112 1e-23 UniRef50_C2D8M2 Possible transcriptional regulator n=1 Tax=Atopo... 112 1e-23 UniRef50_C9Q9L7 Helix-turn-helix protein RpiR n=6 Tax=Vibrio Rep... 112 2e-23 UniRef50_C6D7K6 Transcriptional regulator, RpiR family n=1 Tax=P... 111 3e-23 UniRef50_B5I8T9 Sugar isomerase n=1 Tax=Streptomyces sviceus ATC... 111 4e-23 UniRef50_UPI000169311A hypothetical protein Plarl_08670 n=1 Tax=... 110 4e-23 UniRef50_B7RYI4 Transcriptional regulator, RpiR family protein n... 110 4e-23 UniRef50_C4FUK3 Putative uncharacterized protein n=1 Tax=Catonel... 110 4e-23 UniRef50_A7G380 Transcriptional regulator, RpiR family n=1 Tax=C... 110 5e-23 UniRef50_Q03CI3 Transcriptional regulator n=10 Tax=Lactobacillac... 110 6e-23 UniRef50_C3JIB3 RpiR-family transcriptional regulator n=2 Tax=Rh... 110 7e-23 UniRef50_B5GNW3 RpiR-family transcriptional regulator n=14 Tax=S... 110 7e-23 UniRef50_A5EB66 Transcriptional regulator, RpiR family n=1 Tax=B... 110 8e-23 UniRef50_Q2JBJ8 Transcriptional regulator, RpiR family n=1 Tax=F... 109 1e-22 UniRef50_A9KIQ0 Transcriptional regulator, RpiR family n=1 Tax=C... 109 1e-22 UniRef50_B0NYS8 Putative uncharacterized protein n=2 Tax=Clostri... 109 1e-22 UniRef50_C5BVH6 Transcriptional regulator, RpiR family n=2 Tax=A... 108 2e-22 UniRef50_C6J4B4 Transcriptional regulator n=1 Tax=Paenibacillus ... 108 2e-22 UniRef50_C7T7Y4 Transcriptional regulator n=8 Tax=Lactobacillus ... 108 2e-22 UniRef50_Q04DU1 Transcriptional regulator n=2 Tax=Oenococcus oen... 108 3e-22 UniRef50_C8NHI8 Probable transcriptional regulator YbbH n=1 Tax=... 108 3e-22 UniRef50_A9M040 RpiR/YebK/YfhH family transcriptional regulator ... 108 3e-22 UniRef50_C3RHA3 Transcriptional regulator n=3 Tax=Bacteria RepID... 108 3e-22 UniRef50_B6G0W9 Putative uncharacterized protein n=1 Tax=Clostri... 108 3e-22 UniRef50_B6GA31 Putative uncharacterized protein n=1 Tax=Collins... 107 4e-22 UniRef50_Q6AH41 Transcriptional regulator, RpiR family n=1 Tax=L... 107 5e-22 UniRef50_A9BH25 Transcriptional regulator, RpiR family n=1 Tax=P... 107 5e-22 UniRef50_Q4LA29 Similar to transcriptional regulator n=1 Tax=Sta... 107 6e-22 UniRef50_B9Y4T6 Putative uncharacterized protein n=2 Tax=Holdema... 106 7e-22 UniRef50_C0D4M2 Putative uncharacterized protein n=1 Tax=Clostri... 106 1e-21 UniRef50_C0X6G8 RpiR family transcriptional regulator n=23 Tax=E... 106 1e-21 UniRef50_Q45581 Uncharacterized HTH-type transcriptional regulat... 105 2e-21 UniRef50_Q2J8J9 Transcriptional regulator, RpiR family n=1 Tax=F... 105 2e-21 UniRef50_D0W145 Transcriptional regulator HexR n=3 Tax=Neisseria... 105 2e-21 UniRef50_A4TMJ1 RpiR-family transcriptional regulatory protein n... 105 2e-21 UniRef50_A7VQA6 Putative uncharacterized protein n=1 Tax=Clostri... 105 2e-21 UniRef50_C8JWL0 Phosphosugar-binding transcriptional regulator n... 105 3e-21 UniRef50_C4G9W4 Putative uncharacterized protein n=1 Tax=Shuttle... 104 3e-21 UniRef50_C2H8J8 Bifunctional RpiR family transcriptional regulat... 104 4e-21 UniRef50_C0D6A5 Putative uncharacterized protein n=1 Tax=Clostri... 104 4e-21 UniRef50_C2LK66 Phosphosugar-binding transcriptional regulator n... 103 5e-21 UniRef50_Q7MD38 Transcriptional regulator n=31 Tax=Gammaproteoba... 103 7e-21 UniRef50_C7TGD6 Transcriptional regulator, RpiR family n=3 Tax=L... 103 7e-21 UniRef50_B9DJX2 Putative RpiR family transcriptional regulator n... 103 9e-21 UniRef50_A2RL41 Transcriptional regulator, RpiR family n=4 Tax=L... 103 9e-21 UniRef50_C1IBM1 Phosphosugar-binding transcriptional regulator n... 102 1e-20 UniRef50_D0I0X8 Sialic acid utilization regulator RpiR family n=... 102 1e-20 UniRef50_B1R0U2 Transcriptional regulator, RpiR family n=9 Tax=F... 102 2e-20 UniRef50_C5C1Y9 Transcriptional regulator, RpiR family n=1 Tax=B... 101 3e-20 UniRef50_A8F3D9 Transcriptional regulator, RpiR family n=1 Tax=T... 101 3e-20 UniRef50_D2PUN7 Transcriptional regulator, RpiR family n=1 Tax=K... 101 3e-20 UniRef50_C2C2H3 Bifunctional RpiR family transcriptional regulat... 101 3e-20 UniRef50_C4L7F8 Transcriptional regulator, RpiR family n=2 Tax=G... 101 4e-20 UniRef50_P0ACS8 HTH-type transcriptional regulator rpiR n=34 Tax... 101 4e-20 UniRef50_C2KD15 RpiR family transcriptional regulator n=3 Tax=La... 100 4e-20 UniRef50_C2D9S0 RpiR family transcriptional regulator n=1 Tax=At... 100 6e-20 UniRef50_D0KLH9 Transcriptional regulator, RpiR family n=1 Tax=P... 100 6e-20 UniRef50_C4FU45 Putative uncharacterized protein n=1 Tax=Catonel... 100 6e-20 UniRef50_Q02VU4 Transcriptional regulator n=4 Tax=Lactococcus la... 100 7e-20 UniRef50_Q040R4 Transcriptional regulator n=8 Tax=Lactobacillus ... 100 8e-20 UniRef50_A8UCF6 Phosphosugar-binding transcriptional regulator, ... 100 1e-19 UniRef50_A4WDW6 Transcriptional regulator n=10 Tax=Enterobacteri... 99 1e-19 UniRef50_UPI00017F2FF2 transcriptional regulator n=1 Tax=Escheri... 99 1e-19 UniRef50_C1PED1 Transcriptional regulator, RpiR family n=1 Tax=B... 99 1e-19 UniRef50_Q02YU6 Transcriptional regulator n=4 Tax=Lactobacillale... 99 2e-19 UniRef50_A4E6N7 Putative uncharacterized protein n=1 Tax=Collins... 99 2e-19 UniRef50_C2L140 RpiR family transcriptional regulator n=6 Tax=Cl... 98 3e-19 UniRef50_A8UBX8 Phosphosugar-binding transcriptional regulator, ... 97 5e-19 UniRef50_D2BPE4 Transcriptional regulator, RpiR family n=1 Tax=L... 97 5e-19 UniRef50_C0X1P6 Transcriptional regulator RpiR n=21 Tax=Enteroco... 97 7e-19 UniRef50_C6L9A2 Transcriptional regulator, RpiR family n=1 Tax=B... 97 8e-19 UniRef50_UPI00019054B9 hypothetical protein RetlB5_21050 n=1 Tax... 96 1e-18 UniRef50_A0AJB4 Complete genome n=7 Tax=Bacillales RepID=A0AJB4_... 96 1e-18 UniRef50_D0BLW5 Transcriptional regulator, RpiR family n=3 Tax=G... 96 1e-18 UniRef50_C0D858 Putative uncharacterized protein n=1 Tax=Clostri... 96 2e-18 UniRef50_C2L0R5 Possible transcriptional regulator RpiR n=1 Tax=... 96 2e-18 UniRef50_Q1J2N3 Transcriptional regulator, RpiR family n=2 Tax=D... 96 2e-18 UniRef50_P46117 Uncharacterized HTH-type transcriptional regulat... 95 2e-18 UniRef50_C0C5Q9 Putative uncharacterized protein n=1 Tax=Clostri... 95 2e-18 UniRef50_C2HLD1 Transcriptional regulator n=3 Tax=Lactobacillus ... 95 2e-18 UniRef50_B9DVM9 RpiR family regulatory protein n=2 Tax=Streptoco... 95 3e-18 UniRef50_B7CB00 Putative uncharacterized protein n=1 Tax=Eubacte... 95 3e-18 UniRef50_A9NEV7 Transcriptional regulator, RpiR family n=1 Tax=A... 94 4e-18 UniRef50_A6LRG7 Transcriptional regulator, RpiR family n=2 Tax=F... 94 4e-18 UniRef50_D1AG49 Transcriptional regulator, RpiR family n=1 Tax=S... 94 4e-18 UniRef50_B7GUA9 Transcriptional regulator, RpiR family n=7 Tax=B... 94 4e-18 UniRef50_Q5WK55 RpiR family transcriptional regulator n=1 Tax=Ba... 94 4e-18 UniRef50_B9DT48 RpiR family regulatory protein n=1 Tax=Streptoco... 94 5e-18 UniRef50_C4F999 Putative uncharacterized protein n=1 Tax=Collins... 94 5e-18 UniRef50_A6UCC0 Transcriptional regulator, RpiR family n=4 Tax=P... 94 6e-18 UniRef50_C3RHU4 Transcriptional regulator n=2 Tax=Bacteria RepID... 94 7e-18 UniRef50_C8QBF9 Transcriptional regulator, RpiR family n=1 Tax=P... 93 9e-18 UniRef50_C0X148 RpiR family transcriptional regulator n=22 Tax=E... 93 1e-17 UniRef50_C6JFN2 Transcriptional regulator n=3 Tax=Clostridiales ... 93 1e-17 UniRef50_D2ELR8 Transcription regulator n=1 Tax=Pediococcus acid... 93 1e-17 UniRef50_B6ITC5 HTH-type transcriptional regulator hexR, putativ... 93 1e-17 UniRef50_A6D304 DNA-binding transcriptional repressor RpiR n=1 T... 92 1e-17 UniRef50_C0Q155 Protein rpiR n=2 Tax=Salmonella enterica RepID=C... 92 2e-17 UniRef50_Q3JNN8 Transcriptional regulator, RpiR family n=54 Tax=... 92 2e-17 UniRef50_A8FIY5 Possible RpiR family transcriptional regulator n... 92 2e-17 UniRef50_A5IV96 Transcriptional regulator, RpiR family n=113 Tax... 92 2e-17 UniRef50_D0DKU0 Transcriptional regulator n=1 Tax=Lactobacillus ... 92 2e-17 UniRef50_A9MLD6 Putative uncharacterized protein n=1 Tax=Salmone... 92 3e-17 UniRef50_C0C246 Putative uncharacterized protein n=2 Tax=Clostri... 92 3e-17 UniRef50_D1AYR1 Transcriptional regulator, RpiR family n=2 Tax=F... 91 3e-17 UniRef50_A8RZI5 Putative uncharacterized protein n=1 Tax=Clostri... 91 5e-17 UniRef50_C4DDH7 Transcriptional regulator, RpiR family n=1 Tax=S... 91 6e-17 UniRef50_C2KAY2 Transcriptional regulator n=6 Tax=Lactobacillus ... 91 6e-17 UniRef50_C7HWK5 RpiR family phosphosugar-binding transcriptional... 90 7e-17 UniRef50_D0XGH5 Putative uncharacterized protein n=1 Tax=Vibrio ... 90 7e-17 UniRef50_Q1LPJ6 Transcriptional regulator, RpiR family n=6 Tax=B... 90 8e-17 UniRef50_C5EPZ9 Transcriptional regulator n=2 Tax=Clostridiales ... 89 2e-16 UniRef50_C4KYQ0 Transcriptional regulator, RpiR family n=1 Tax=E... 89 2e-16 UniRef50_C1XRD4 Transcriptional regulator n=1 Tax=Meiothermus si... 89 2e-16 UniRef50_C6VNS3 Transcription regulator n=3 Tax=Lactobacillus pl... 89 2e-16 UniRef50_Q71VW8 Phosphosugar-binding transcriptional regulator, ... 89 2e-16 UniRef50_D0R5V5 Transcriptional regulator n=10 Tax=Lactobacillus... 89 2e-16 UniRef50_B0MBA6 Putative uncharacterized protein n=2 Tax=Clostri... 89 2e-16 UniRef50_D1BBP1 Transcriptional regulator n=2 Tax=Micrococcineae... 89 3e-16 UniRef50_A8RDU7 Putative uncharacterized protein n=1 Tax=Eubacte... 88 3e-16 UniRef50_A8UCF8 Phosphosugar-binding transcriptional regulator, ... 88 4e-16 UniRef50_D1AUV3 Transcriptional regulator, RpiR family n=5 Tax=B... 87 5e-16 UniRef50_C6JFM8 Transcriptional regulator n=2 Tax=Clostridiales ... 87 5e-16 UniRef50_B2UK47 Transcriptional regulator, RpiR family n=5 Tax=R... 87 6e-16 UniRef50_P46118 HTH-type transcriptional regulator hexR n=302 Ta... 87 8e-16 UniRef50_Q1WQV4 Transcriptional regulator, RpiR family n=4 Tax=L... 87 8e-16 UniRef50_B6GAY7 Putative uncharacterized protein n=1 Tax=Collins... 86 1e-15 UniRef50_A6UGP6 Transcriptional regulator, RpiR family n=1 Tax=S... 86 1e-15 UniRef50_C3WAG5 Transcriptional regulator n=1 Tax=Fusobacterium ... 86 2e-15 UniRef50_C7NDE7 Transcriptional regulator, RpiR family n=2 Tax=L... 85 2e-15 UniRef50_Q0BBX6 Transcriptional regulator, RpiR family n=65 Tax=... 85 2e-15 UniRef50_C5CG85 Transcriptional regulator, RpiR family n=1 Tax=K... 85 3e-15 UniRef50_C5CD76 Transcriptional regulator, RpiR family n=1 Tax=K... 85 4e-15 UniRef50_C3RR03 Sugar isomerase n=2 Tax=Bacteria RepID=C3RR03_9MOLU 85 4e-15 UniRef50_C3RM33 Sugar isomerase n=2 Tax=Bacteria RepID=C3RM33_9MOLU 84 4e-15 UniRef50_Q1QSE2 Transcriptional regulator, RpiR family n=28 Tax=... 84 5e-15 UniRef50_B1Q8U9 Putative phosphosugar-binding transcriptional re... 84 5e-15 UniRef50_Q03HW7 Transcriptional regulator n=13 Tax=Lactobacillal... 84 6e-15 UniRef50_C2C459 RpiR family transcriptional regulator n=1 Tax=Li... 84 6e-15 UniRef50_C9A459 Phosphosugar isomerase transcriptional regulator... 84 7e-15 UniRef50_C1I751 Predicted protein n=3 Tax=Bacteria RepID=C1I751_... 84 8e-15 UniRef50_B9E8A7 Putative uncharacterized protein n=1 Tax=Macroco... 83 1e-14 UniRef50_A4EBN8 Putative uncharacterized protein n=1 Tax=Collins... 83 1e-14 UniRef50_Q03FC5 Transcriptional regulator n=1 Tax=Pediococcus pe... 83 1e-14 UniRef50_D1TJG3 Putative transcriptional regulator, RpiR family ... 83 1e-14 UniRef50_C2D3P4 RpiR family transcriptional regulator (Fragment)... 83 1e-14 UniRef50_C0DAS9 Putative uncharacterized protein n=1 Tax=Clostri... 83 1e-14 UniRef50_A9BXM8 Transcriptional regulator, RpiR family n=16 Tax=... 83 1e-14 UniRef50_C3RI81 Sugar isomerase n=1 Tax=Mollicutes bacterium D7 ... 83 1e-14 UniRef50_C3FD32 Phosphosugar-binding transcriptional regulator n... 83 1e-14 UniRef50_UPI0001BCD92E RpiR family transcriptional regulator n=1... 83 1e-14 UniRef50_Q03Q61 Transcriptional regulator n=1 Tax=Lactobacillus ... 83 1e-14 UniRef50_B9B6B2 Transcriptional regulator, RpiR family n=3 Tax=B... 82 2e-14 UniRef50_C3RJC3 Sugar isomerase n=5 Tax=Bacteria RepID=C3RJC3_9MOLU 82 2e-14 UniRef50_C0C1I3 Putative uncharacterized protein n=1 Tax=Clostri... 82 2e-14 UniRef50_A0JVW9 Transcriptional regulator, RpiR family n=2 Tax=A... 82 2e-14 UniRef50_C6VMT8 Transcription regulator n=3 Tax=Lactobacillus pl... 82 2e-14 UniRef50_C8SX74 Transcriptional regulator, RpiR family n=1 Tax=M... 82 2e-14 UniRef50_Q9WYG1 Uncharacterized HTH-type transcriptional regulat... 81 4e-14 UniRef50_Q03CT7 Transcriptional regulator n=7 Tax=Lactobacillus ... 81 4e-14 UniRef50_A8RCR9 Putative uncharacterized protein n=1 Tax=Eubacte... 81 4e-14 UniRef50_B7C842 Putative uncharacterized protein n=1 Tax=Eubacte... 81 5e-14 UniRef50_C7XVK6 6-phospho 3-hexuloisomerase n=1 Tax=Lactobacillu... 80 5e-14 >UniRef50_D2AGN5 Transcriptional regulator, RpiR family n=1 Tax=Shigella flexneri 2002017 RepID=D2AGN5_SHIF2 Length = 333 Score = 514 bits (1324), Expect = e-144, Method: Compositional matrix adjust. Identities = 256/264 (96%), Positives = 258/264 (97%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 MLYLTKI NA SEFT NEQKIADFL+A VSEL+SVSSRQMAKQLGISQSSIVKFAQKLGA Sbjct: 68 MLYLTKIRNAESEFTGNEQKIADFLRARVSELKSVSSRQMAKQLGISQSSIVKFAQKLGA 127 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCAL Sbjct: 128 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALF 187 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL Sbjct: 188 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 247 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSL DSPLRRLAHFTLDTVSGETEW Sbjct: 248 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLADSPLRRLAHFTLDTVSGETEW 307 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQ 264 RSSSMSTRTAQNSVTDLLFVGLVQ Sbjct: 308 RSSSMSTRTAQNSVTDLLFVGLVQ 331 >UniRef50_A9MIE1 HTH-type transcriptional regulator murR n=48 Tax=Enterobacteriaceae RepID=MURR_SALAR Length = 287 Score = 468 bits (1203), Expect = e-130, Method: Compositional matrix adjust. Identities = 229/280 (81%), Positives = 255/280 (91%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 MLYL K+ NA EFTENEQKIA FL A+V EL++VSSR MAKQL ISQSSIVKFAQKLGA Sbjct: 1 MLYLAKMRNAEGEFTENEQKIATFLLAHVGELKTVSSRNMAKQLEISQSSIVKFAQKLGA 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GFTELRMALI E+S SREK A+HLHSSITS+DSLE++ARKLNREK +ALE+T L+ Sbjct: 61 NGFTELRMALIEEHSVSREKKRDKAVHLHSSITSEDSLEMMARKLNREKIVALEETYNLM 120 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 DY RL+++I +ISKAP IQITG+GGSALVGRDLSFKLMKIG+RVACE DTHVQAT++QAL Sbjct: 121 DYERLEQVINLISKAPLIQITGVGGSALVGRDLSFKLMKIGFRVACEVDTHVQATIAQAL 180 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 ++GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSL DSPLRRLA +TLDTVSGETEW Sbjct: 181 RQGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLADSPLRRLADYTLDTVSGETEW 240 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSEL 280 RSSSMSTRTAQNSVTDLLFVG+VQLNDVESL+MI+RSSEL Sbjct: 241 RSSSMSTRTAQNSVTDLLFVGMVQLNDVESLRMIERSSEL 280 >UniRef50_A0KFB6 Transcriptional regulator, RpiR family n=3 Tax=Gammaproteobacteria RepID=A0KFB6_AERHH Length = 286 Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 122/285 (42%), Positives = 190/285 (66%), Gaps = 1/285 (0%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 ML L+KISN S+ + +E KIAD++ A ++ SS+++A+Q +SQSSIVKF QK+G Sbjct: 1 MLTLSKISNIRSQLSPSELKIADYILACPEQVTHFSSQELAQQADVSQSSIVKFTQKIGF 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GFT ++A+ + L++ I DD LE +A+KL +EK ++ +T L Sbjct: 61 KGFTAFKLAVSEDLGRKHAIKTDNVGDLYNGIGRDDDLETMAKKLAQEKINSIVETTQAL 120 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D A L ++++VI++A +Q+ G+GGSAL +DL +KL+KIG D+HVQ +++Q L Sbjct: 121 DNATLARVLDVINQAGRVQLVGIGGSALTAKDLWYKLLKIGVTTLFAQDSHVQISIAQTL 180 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 GDVQ+ +SYSG+ ++++ AE A++ GAT+IA+TS ++PLR++A LDTV+ E E Sbjct: 181 GPGDVQLVVSYSGASRDVLAAAELAKRNGATLIAVTSFRNTPLRQMADMVLDTVADENEL 240 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 R SS+S+RTAQN++TD+LF+GLVQ D E+ +I + RL Sbjct: 241 RISSISSRTAQNTITDILFLGLVQRRD-EAWALIDGTRGAIDRLN 284 >UniRef50_B5FDJ7 Transcriptional regulator, RpiR family protein n=48 Tax=Gammaproteobacteria RepID=B5FDJ7_VIBFM Length = 283 Score = 228 bits (582), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 124/268 (46%), Positives = 178/268 (66%), Gaps = 7/268 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L KI N S + N KI DF+ + + + S SS+ +A ++G+SQSSIVK Q+LG Sbjct: 1 MNILEKIQNQRSNLSSNGIKILDFILDDPASISSYSSQALAAKVGVSQSSIVKLTQRLGF 60 Query: 61 QGFTELRMALI---GEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTC 117 +GFT ++A+I G A E +H+ I SDDS IA+KL +EK AL T Sbjct: 61 KGFTAFKLAIIEDLGRKQAILEPERP----IHNKINSDDSSLTIAQKLVQEKTHALIATT 116 Query: 118 ALLDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVS 177 ++++ + + ++++A IQI G+GGSAL +DL+FKL+KIG E D+HVQ + Sbjct: 117 NAINFSEFELVTTLLNQAQRIQIVGIGGSALTAKDLAFKLLKIGMTALTEQDSHVQIATA 176 Query: 178 QALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGE 237 L K DVQI ISYSGS+KEI++ A+ A +GATVIA+TS SPLR+LA+F +DT++ E Sbjct: 177 NTLTKQDVQIVISYSGSRKEILMAAQTAMDKGATVIALTSTKKSPLRKLANFCIDTIADE 236 Query: 238 TEWRSSSMSTRTAQNSVTDLLFVGLVQL 265 ++RSSS+S+RTAQN +TDLLF+ L+Q+ Sbjct: 237 RQFRSSSISSRTAQNVITDLLFMTLLQI 264 >UniRef50_UPI000197C448 transcriptional regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C448 Length = 286 Score = 226 bits (576), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 116/264 (43%), Positives = 176/264 (66%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L I+ + EN++KIA F+ N + ++SS+Q+A+ L +SQS+IVKF+QK+G Sbjct: 1 MTLLDIITYSLPRLAENQRKIAQFILENPENVLNLSSQQLAEILDVSQSAIVKFSQKVGV 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +G+ L++AL + K A LH+ I DD+L V+A+KL EK ++ +T L+ Sbjct: 61 KGYPALKLALSEIIGRQQLKDGAPHSALHNRIAPDDNLMVVAQKLAMEKNHSITETTKLI 120 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D+ + ++I+E I ++ +QI G+GGS L +DLS+KL KIG E+D HVQ + L Sbjct: 121 DFKQFERIVERIDQSQRVQIVGIGGSGLTAKDLSYKLQKIGITTLVESDHHVQIAAALTL 180 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 DVQI IS++G +K+++ A ARKQGA VIAIT DSPL +LA + L++++ E EW Sbjct: 181 NTHDVQIVISFTGRRKDMLTAANIARKQGACVIAITRDCDSPLGQLADYVLESIAEEDEW 240 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQ 264 RSSS+S+RTAQN++TDL+F+ L+Q Sbjct: 241 RSSSISSRTAQNTLTDLIFMALLQ 264 >UniRef50_A1JQZ2 RpiR family regulatory protein n=12 Tax=Enterobacteriaceae RepID=A1JQZ2_YERE8 Length = 286 Score = 216 bits (551), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 112/264 (42%), Positives = 174/264 (65%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L +I+ E EN++KIA + N + S+SS Q A+ G+SQS+IVKF+QK+G Sbjct: 1 MSILNEITWLLPELAENQKKIAKCILDNPESILSISSSQFAEDAGVSQSAIVKFSQKIGM 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF L++A+ E S + + LH+SI+ +DSL V+A+KL EK ++ +T + Sbjct: 61 KGFPALKIAISEELSRNNLFKSYPHKALHNSISPEDSLMVMAQKLAHEKTASIMETTRKI 120 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 +++ Q+++ +I+ A +QI G+ G+ L +DLS+KL KIG EAD HVQ + L Sbjct: 121 NFSVFQQVVSLINAAQRVQIVGIWGAGLTAKDLSYKLQKIGIMTLVEADLHVQIAAALTL 180 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 DVQI +S++G +K++ + A A+ QGATVIAIT SPL ++A + L+++S E EW Sbjct: 181 TPKDVQIVLSFTGRRKDMKIAATVAKAQGATVIAITGSKVSPLAKIADYVLESISDENEW 240 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQ 264 RSSS+S+RTAQN++TDL+F+ L+Q Sbjct: 241 RSSSISSRTAQNTLTDLIFLALMQ 264 >UniRef50_Q9CKN4 Putative uncharacterized protein n=1 Tax=Pasteurella multocida RepID=Q9CKN4_PASMU Length = 286 Score = 214 bits (546), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 111/264 (42%), Positives = 175/264 (66%), Gaps = 1/264 (0%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M +L K+ + + NEQ+IADF+ + E++S SS+ +A Q+ +SQS+I+KF+QKLGA Sbjct: 1 MGFLIKLKHTYPSLSPNEQRIADFILKHPHEVKSSSSKALANQIAVSQSAIIKFSQKLGA 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 F++ ++A I E +E + +HLH SIT D L IA KL EK+ AL+++ +L Sbjct: 61 DKFSDFKLA-ISEALIRQETQSEPRVHLHDSITDKDDLSEIAEKLFVEKQQALKESLSLN 119 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + +++E + +A IQ+ G+G SALV +D +KL KIG V E DTH +SQ+L Sbjct: 120 AIPYVARVVEQLMQAKRIQLMGIGNSALVAKDFFYKLTKIGLPVVTETDTHASLAMSQSL 179 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 D+ IS+SG +EI+L AE A+ + +IA+T+LT +PL LA + L +V+ E+ + Sbjct: 180 TPQDILFLISFSGRHREILLAAENAKARQIKIIALTALTTNPLHELADYLLYSVADESTF 239 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQ 264 RSSS+++RTAQ+++TDLLF+G++Q Sbjct: 240 RSSSIASRTAQHAITDLLFMGILQ 263 >UniRef50_A5L3V2 Transcriptional regulator, RpiR family protein n=3 Tax=Vibrionales RepID=A5L3V2_9GAMM Length = 282 Score = 168 bits (426), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 93/261 (35%), Positives = 158/261 (60%), Gaps = 3/261 (1%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 + K+ + + ++ +A ++ + +++ +SS ++AK +G+SQS+IVKF+QK+G +GF Sbjct: 4 IAKVKALLPKLSPSDSLVARYVLDHPQQVKQLSSPELAKAVGVSQSTIVKFSQKIGYKGF 63 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 +E+++ L Y + + +H +IT DS + + KL K +LE+T L + Sbjct: 64 SEMKVKL---YQSDMSYQPVSQRGIHGTITRKDSPDTVMEKLLASKTQSLERTVLLNEGE 120 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 +L +++ A IQI+G+G S+LV +D ++KLMKIG+ V E D H+Q + +L + Sbjct: 121 QLSNAADLLHLANKIQISGVGASSLVAKDFAYKLMKIGHAVHAEPDAHIQIANAASLTEN 180 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 DV +AISYSG +E+V A+ AR + A VI I+ L+ S L + A L + + E RSS Sbjct: 181 DVLVAISYSGKTREVVKVAQLARSKKAKVIVISQLSPSALDKYADIKLISAADENHIRSS 240 Query: 244 SMSTRTAQNSVTDLLFVGLVQ 264 S++ R +Q +TDLLF+ L Q Sbjct: 241 SITARDSQFYITDLLFIALTQ 261 >UniRef50_A0ZNS9 Putative uncharacterized protein n=3 Tax=Photobacterium RepID=A0ZNS9_PHOPO Length = 277 Score = 164 bits (416), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 98/268 (36%), Positives = 156/268 (58%), Gaps = 7/268 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M + KI+N S+ + + QKIA + + + S+SS Q+A+Q + QSSIVKF QKLG Sbjct: 1 MTIIAKIANIKSQLSPSAQKIAALILQQPAAVVSLSSLQLAQQANVGQSSIVKFTQKLGF 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF + A I E A ++ L + I+ D+L IA+KL +K A+ +T + Sbjct: 61 TGFPAFKNA-IKEELARQQAIGNDPQQLQNQISHSDTLITIAQKLAHQKTDAIIETTNAI 119 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D L+ II + A IQ+ G G SA++ +D S KL+ +G E D+ Q +++ L Sbjct: 120 DEQNLKNIIALFINAQRIQLVGFGHSAIIAKDFSTKLLTLGMMAIAEQDSRSQIDIAKTL 179 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGET-- 238 D+Q I Y G+ ++ +L A +A+ +GAT+IA+TS +PLR+LA F+LDT++ ET Sbjct: 180 GPTDIQCHICYDGNHQDALLTAHSAKMKGATLIALTSPHSTPLRQLAQFSLDTLAIETSN 239 Query: 239 ----EWRSSSMSTRTAQNSVTDLLFVGL 262 + + S+++ AQ ++TDLLF+ L Sbjct: 240 HRQYQPHNYSIASHAAQQTLTDLLFMAL 267 >UniRef50_C3WE65 Transcriptional regulator n=5 Tax=Fusobacterium RepID=C3WE65_FUSMR Length = 284 Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 81/263 (30%), Positives = 156/263 (59%), Gaps = 2/263 (0%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L KI++ + E+K+ +++ N +++ +++ ++A SQ+++V+FA++LG +GF Sbjct: 4 LIKINSMLDNISSTEKKVGEYILENPDKIKDLNTYELANITKTSQATVVRFAKRLGFKGF 63 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 ++AL + + +++ +H I DDS E+I RK++ E A+ T + D+ Sbjct: 64 PAFKLALSQDLGNRKAESHVNIMH--EEIKPDDSFEIIGRKISNENITAISDTYEVTDFT 121 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L+K + ++SKA I + G+G S +V +D +KL+++G E DTH+Q + + + Sbjct: 122 ELEKAVVMLSKARKIMLAGIGFSGIVAKDFYYKLLELGKHAMIEVDTHMQLSCLSTMGED 181 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 DV IS+SG E+ + A+ +G TVIA+TS+ +P++ LA L+TV + +RS+ Sbjct: 182 DVLFVISHSGKTMEMYNVVKVAKSKGITVIAMTSIAPNPIKDLADIRLNTVEMNSNFRST 241 Query: 244 SMSTRTAQNSVTDLLFVGLVQLN 266 ++S R +Q +V D+L+V ++ N Sbjct: 242 ALSPRISQLTVIDMLYVKMMLEN 264 >UniRef50_P37767 Uncharacterized HTH-type transcriptional regulator yfhH n=149 Tax=Enterobacteriaceae RepID=YFHH_ECOLI Length = 282 Score = 159 bits (403), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 97/272 (35%), Positives = 162/272 (59%), Gaps = 5/272 (1%) Query: 14 FTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGE 73 ++++K+AD+L + +SS+Q+A + G+SQSS+VKFAQKLG +GF L++AL E Sbjct: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL-SE 72 Query: 74 YSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVIS 133 AS+ ++ ++ +H+ I DD L ++ KL +E A+ T + +L + + ++ Sbjct: 73 ALASQPES--PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 Query: 134 KAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSG 193 A I +TG+G S LV ++ ++KLMKIG+ A D H QA D+ +AISY+G Sbjct: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 Query: 194 SKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNS 253 ++E+ L A+ + G V+AIT T + L++ A L T++ E S+S+S AQ Sbjct: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGM 250 Query: 254 VTDLLFVGLVQLNDVE-SLKMIQRSSELTQRL 284 +TDLLF+ L+Q D+E + + I+ S L ++L Sbjct: 251 LTDLLFIALIQ-QDLELAPERIRHSEALVKKL 281 >UniRef50_A1HSQ6 Transcriptional regulator, RpiR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSQ6_9FIRM Length = 287 Score = 157 bits (396), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 88/277 (31%), Positives = 161/277 (58%), Gaps = 10/277 (3%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L +I + T+ EQK+AD++ N +++ +S ++A+ G ++++I + QK+G +G+ Sbjct: 12 LPRIRSIYKALTKAEQKVADYILENAAKVVHLSITELAEVSGSAEATIFRLCQKVGYRGY 71 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 ++AL G+ E ++ + + DS+ VIARK+ + L+ T ++D A Sbjct: 72 QHFKIALAGDLYTPAEL-------VYKDVNAGDSMGVIARKVFHDINEGLQDTLKIIDEA 124 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L K + I+KA I G GSA++ D+ ++ M+ G V AD H+Q + ++ G Sbjct: 125 ALDKAVAAITKARRIDAYGSAGSAVIAADIEYRFMRFGIPVRAYADPHMQIISAALMQPG 184 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 D+ IA+S++G+ ++++ A++ GATVIAITS SPL +LA TL + ETE+RS Sbjct: 185 DLAIAVSHTGANRDLLDSVAMAKQNGATVIAITSYMKSPLSKLADITLCGSAKETEYRSE 244 Query: 244 SMSTRTAQNSVTDLLFVGLV---QLNDVESLKMIQRS 277 +M+ R ++ D L+VG++ Q VE+++ I+++ Sbjct: 245 AMAARLVHLAIVDALYVGVMLDRQDCIVENMEKIRKA 281 >UniRef50_Q8R7I8 Transcriptional regulator n=3 Tax=Firmicutes RepID=Q8R7I8_THETN Length = 285 Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 84/263 (31%), Positives = 145/263 (55%), Gaps = 8/263 (3%) Query: 6 KISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTE 65 KI + + T E+K+AD++ N + +S ++A++ G +++IV+F +++G GF E Sbjct: 12 KIQSIYNSLTNAEKKVADYVLENAESVIYLSITELAEKCGTGETTIVRFCRRIGLSGFQE 71 Query: 66 LRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARL 125 ++ L E + +H +I+ +D L+V+ +K+ E LA+ T LL + L Sbjct: 72 FKLNLAKEIAEPETS-------IHENISFNDPLDVLVQKITTENTLAISNTVKLLSMSEL 124 Query: 126 QKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDV 185 +K ++ I A IQ G+G S D +K M++G V D H+QA + +L DV Sbjct: 125 EKAVDAIINARKIQFYGVGASGYTALDAKYKFMRLGLNVDANLDAHIQAISAVSLTDKDV 184 Query: 186 QIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSM 245 + IS+SGS K+ V A++ GA VIAIT+ SP+ +A L T + ET RS ++ Sbjct: 185 AVGISFSGSTKDTVETCRLAKEAGARVIAITNYARSPITSVADIVLLTSAKETPLRSGAL 244 Query: 246 STRTAQNSVTDLLFVGL-VQLND 267 +++ AQ + D+L+ + V+L D Sbjct: 245 TSKIAQLHILDILYTAVAVKLKD 267 >UniRef50_B8E0M8 Transcriptional regulator, RpiR family n=2 Tax=Dictyoglomus RepID=B8E0M8_DICTD Length = 281 Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 93/273 (34%), Positives = 150/273 (54%), Gaps = 10/273 (3%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L KI F ++E+K+A+++ A E+ + ++A+++G+S+++IV+ +KLG +GF Sbjct: 6 LEKIKEQKESFRDSEEKVANYILARWQEVLHLPITELAERIGVSEATIVRMCKKLGLRGF 65 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 EL++AL + EK +H ++ D LE I +K+ A+E T ++ Sbjct: 66 QELKIAL------ATEKIQPIKT-VHQAVQEGDDLETILKKVFSANIRAMESTLNVISVK 118 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 +++ I+ I A +QI G+GGS V D K MK G D+H+ A + L+ Sbjct: 119 EIERAIDAILNARQLQIYGVGGSGPVALDAQHKFMKTGIPTVAYIDSHMMAMSASILEPQ 178 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 DV I IS SGS K+I E A+ +GAT I IT +PL R+ L S ET +R+ Sbjct: 179 DVVIGISASGSSKDIFEALELAKNRGATTIGITHYAKTPLDRVLDIKLSVSSEETFYRTE 238 Query: 244 SMSTRTAQNSVTDLLFVG--LVQLND-VESLKM 273 S S R AQ S+ D L++G L +L+ +E+LK+ Sbjct: 239 STSARIAQLSIIDTLYIGVALKRLDKMIENLKL 271 >UniRef50_Q28KP3 Transcriptional regulator, RpiR family n=6 Tax=Alphaproteobacteria RepID=Q28KP3_JANSC Length = 306 Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 98/272 (36%), Positives = 160/272 (58%), Gaps = 5/272 (1%) Query: 14 FTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGE 73 + +++IAD + + + +SS ++A+ G SQSS+VKF QKLG G+ +LR+A+ Sbjct: 39 LSAGDRQIADTILGDPDRMARLSSGELARAAGRSQSSVVKFCQKLGFSGYQDLRLAVTRA 98 Query: 74 YSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVIS 133 + + +A +HSSI D + A+KL K AL++T ++ L + ++ Sbjct: 99 AATQKAPNDA----VHSSIEVSDDASMTAQKLLASKIHALQETLSINPAKNLDAARDALN 154 Query: 134 KAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSG 193 A +Q++G+G S+LV RD +KL K+G V +AD+H+Q S L DV +++S SG Sbjct: 155 GAARVQLSGVGASSLVARDFVYKLQKLGISVLFDADSHIQMAHSATLTPDDVLVSLSQSG 214 Query: 194 SKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNS 253 E + AEAA K+GAT+I +T L +PL +A L TV+ E + RSS++++R AQ Sbjct: 215 FSLETLRIAEAAAKRGATIITVTGLHPNPLADVADKALCTVTDEDQVRSSAITSRDAQLI 274 Query: 254 VTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + DLLF+ LVQ+ D ++ +I ++E LK Sbjct: 275 LLDLLFLRLVQVRD-GAVDLIGGAAEAVAPLK 305 >UniRef50_A7GD47 Transcriptional regulator, RpiR family n=10 Tax=Clostridium RepID=A7GD47_CLOBL Length = 281 Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 93/285 (32%), Positives = 158/285 (55%), Gaps = 6/285 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L +I T++E+KIA+++ + ++ S S++++A + S +SI++F +K+G Sbjct: 1 MGVLLRIRENFDSMTKSEKKIAEYIFKSPKDIISDSAQEIAIKTSTSPASIIRFTKKVGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 E + AL+ E ++E T I +DS++ I KL + + T L+ Sbjct: 61 NSLNEFKFALVAE-EYTKEST-----EFDYIINYNDSIDSIINKLGNKVIDTINDTKELV 114 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D +L + ++ I A I + G+G SA+V D +KL++I +V + D+H+Q VS + Sbjct: 115 DDEKLLEAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMFQQDSHLQLAVSVHI 174 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 DV +AISYSG+ +E+ L E A+K GAT IAIT S L +A L+ S E + Sbjct: 175 TNRDVAVAISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDL 234 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 R ++S+RT+Q VTD LF+G+ + N ++ K + + L + LK Sbjct: 235 RIGAISSRTSQLFVTDSLFLGIAKENLDKTEKNLINTRNLVEVLK 279 >UniRef50_Q15N75 Transcriptional regulator, RpiR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15N75_PSEA6 Length = 282 Score = 143 bits (360), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 95/264 (35%), Positives = 150/264 (56%), Gaps = 5/264 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M TKI + +E K+A F+ ++ + ++ +SS+++A +G+SQSS+VKFAQKLG Sbjct: 1 MSTFTKIKAIKDTLSNSELKLAKFVLSSSNAVRDLSSQELANVVGVSQSSVVKFAQKLGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +G+ ++ +I +++ + N LH IT +DS + ++ KL K L +T L Sbjct: 61 KGYPAFKLGVIDALNSTASEGN-----LHGKITLNDSFKQVSEKLLSSKVAVLTETKNLN 115 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + A + +E++ A I I GLGGSALVG+D S+KL K+G E D H Q + L Sbjct: 116 EEAAFHQAVELLKSAKRILICGLGGSALVGKDFSYKLQKLGMLAIEEPDMHAQLAFAATL 175 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + D+ AIS SGS +EIV + A++ VI +T +P+ LA L +V+ E Sbjct: 176 SENDLVFAISESGSTREIVNVVKQAKQNSCKVITVTRYGATPVSDLADIKLYSVAEEESA 235 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQ 264 R SS+ RTAQ + D+LF+ + Q Sbjct: 236 RLSSIMARTAQEFIIDILFIAITQ 259 >UniRef50_C7MQM6 Transcriptional regulator, RpiR family n=5 Tax=Actinomycetales RepID=C7MQM6_SACVD Length = 333 Score = 143 bits (360), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 84/262 (32%), Positives = 148/262 (56%), Gaps = 3/262 (1%) Query: 18 EQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSAS 77 EQ++A + + S + S ++A S++++ +F + +G G+ +LR+AL + + + Sbjct: 54 EQRVAKVVLEDPSSVARRSITEVAMAAKTSETTVTRFCKAIGVGGYPQLRIALAADTART 113 Query: 78 REKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPF 137 K++ L IT+DD L + K++ A+E+T LD A L ++ E++++A Sbjct: 114 EAKSS---RDLGGDITADDDLASVVSKVSFADARAVEETAEQLDIAELTRVTELLAEATR 170 Query: 138 IQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKE 197 + + G+G SA V DL KL +IG +DTH+ T + L +GDV +AIS+SG+ + Sbjct: 171 VDVYGVGASAFVAADLQQKLHRIGRVSFAWSDTHIMLTSAAVLSEGDVAVAISHSGATTD 230 Query: 198 IVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDL 257 V A++ GAT +AIT+ SP+ +A L T + ET +RS + ++R AQ +V D Sbjct: 231 TVEALRVAKEHGATTVAITNFPRSPIASVADHVLTTAARETTFRSGATASRIAQLTVIDC 290 Query: 258 LFVGLVQLNDVESLKMIQRSSE 279 LF+G+ Q ES+ ++ + E Sbjct: 291 LFIGVAQRRMDESMAALEATRE 312 >UniRef50_D1YCB1 Transcriptional regulator, RpiR family n=3 Tax=Propionibacterium acnes RepID=D1YCB1_PROAC Length = 290 Score = 143 bits (360), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 96/282 (34%), Positives = 152/282 (53%), Gaps = 3/282 (1%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L +I A + E ++A + A + S+ Q+A+ G+S +++V+F + LG G+ Sbjct: 6 LPRIDMARTTMRPAEAQVAAVILAKPDWTLAASTSQLAEAAGVSPATVVRFCRALGMSGY 65 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 ELR L + S + +++ +IT DDSL + K+ + +E T +D Sbjct: 66 RELRTELARDLSRRTLELERSSV-AEGTITLDDSLTQMITKIAFHEARTIENTARAVDAD 124 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L+ + IS AP + G+G S LV DLS KL +IG DTH+Q + K+ Sbjct: 125 ELEAVASAISIAPRTALFGVGSSGLVASDLSEKLERIGLVCQHHQDTHMQLVHAALCKRP 184 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 V + IS+SG+ +E+V A+K GAT +A+T L DSP+ RLA L T + ET+ R+ Sbjct: 185 CVALGISFSGNTQEVVEALTVAQKHGATTVAMTGLPDSPVGRLADHVLVTSARETQVRAG 244 Query: 244 SMSTRTAQNSVTDLLFVGLVQL--NDVESLKMIQRSSELTQR 283 +MS+R AQ +V D LF + QL +D+E+L R++ T R Sbjct: 245 AMSSRMAQLAVVDFLFARVAQLCMDDLETLLSSTRTAVSTHR 286 >UniRef50_C5CIM2 Transcriptional regulator, RpiR family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CIM2_KOSOT Length = 283 Score = 142 bits (359), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 92/266 (34%), Positives = 145/266 (54%), Gaps = 7/266 (2%) Query: 14 FTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGE 73 FT+ E+KIA F+ N ++ +S +++ L +S+ SIV+F QKLG GF ++AL Sbjct: 18 FTKTEKKIATFVVKNPQKVVYMSLTEVSDILKVSEGSIVRFCQKLGYTGFHPFKIAL--A 75 Query: 74 YSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVIS 133 S ++E +++ +S S V R ++ ++ T + L+ +E I Sbjct: 76 VSENQESFSSSEFDFNSRDLSSLKNYVAQRHID-----VIKNTSEFISEEILEACVEKIL 130 Query: 134 KAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSG 193 A I I+G+G S D +K M+IG D H+QA ++ L++GDV +AIS SG Sbjct: 131 TARTILISGVGASGNTAHDAFYKFMRIGLNCKTSHDAHIQAMIASELREGDVLLAISQSG 190 Query: 194 SKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNS 253 S EIV A+ ARK GATVIAIT SPL R AH L T + E+ + S ++ ++ AQ Sbjct: 191 STLEIVDIADIARKGGATVIAITGYARSPLARFAHHVLLTPTRESPFESGALRSKIAQLY 250 Query: 254 VTDLLFVGLVQLNDVESLKMIQRSSE 279 V +LLF + + + K I+R+++ Sbjct: 251 VLELLFTAVFHRMEEKGRKFIERTAD 276 >UniRef50_Q8RD36 Uncharacterized HTH-type transcriptional regulator TTE0211 n=3 Tax=Clostridia RepID=Y211_THETN Length = 282 Score = 142 bits (359), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 91/279 (32%), Positives = 149/279 (53%), Gaps = 11/279 (3%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L I S FT +E KIA ++ N + + +S ++A S++SI++F + +G +GF Sbjct: 5 LAVIREMSSSFTPSEAKIAKYILENPTVVTELSVNELANACDTSEASIIRFCRTIGLKGF 64 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 EL++ + + K L ITS+D + + +K+ + A++ T A+L+ Sbjct: 65 QELKIKIAVSLAKQTRK-------LDGGITSEDDVMAVIQKIANFNKQAIDSTIAVLNAE 117 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L K E ++ A I G+ S +V D K +I DTH+Q T + LKKG Sbjct: 118 ELTKAAEALANANKIDFYGVAASGVVAYDAMLKFSRINIPCTAYQDTHLQLTSAVNLKKG 177 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 DV ISYSG+ KEIV + A++ GAT I++T SPL + A L S E +R+ Sbjct: 178 DVAFGISYSGATKEIVEAIQTAKEAGATTISLTKYGQSPLAKAADINLFVSSEEAMFRAG 237 Query: 244 SMSTRTAQNSVTDLLFVGLVQ--LNDVESLKMIQRSSEL 280 +M++R AQ +V D+LF+ + Q NDV ++ ++ +SE+ Sbjct: 238 AMASRIAQLTVIDILFILVAQKKYNDV--VRYLENTSEV 274 >UniRef50_A9KMQ5 Transcriptional regulator, RpiR family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KMQ5_CLOPH Length = 285 Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 83/265 (31%), Positives = 142/265 (53%), Gaps = 2/265 (0%) Query: 18 EQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSAS 77 E+K+A + N+ + S+ ++A++ G+SQ + ++F + +G G +L+ +L E ++S Sbjct: 19 ERKVATYFLNNIENIFSIPIARLAEESGVSQVTWIRFCKAIGFDGLKDLKKSLFMELNSS 78 Query: 78 REKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPF 137 + T+ S I +LE + + A+E T L+DY L+K++ ++SKA Sbjct: 79 TSEGIDTSDF--SDIKKHSTLEQMCNTIRNTTLQAVEDTIKLIDYDTLKKVVSILSKASC 136 Query: 138 IQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKE 197 I++ G+G SALV D KL++I V D H Q + DV + SYSG+ KE Sbjct: 137 IKLFGVGASALVADDFCKKLLRINKNVNFSYDMHTQLVYGANARPEDVAVIFSYSGTTKE 196 Query: 198 IVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDL 257 ++ + A+K I IT T SPL A +++ + E +RS +MS+R AQ ++ DL Sbjct: 197 MLEIMDLAKKSNCPTIVITKYTKSPLVASADYSIYISAPEINYRSGAMSSRIAQLTIVDL 256 Query: 258 LFVGLVQLNDVESLKMIQRSSELTQ 282 LF L N K +++SSE+ + Sbjct: 257 LFTSLANKNYTSVEKYLEKSSEVCR 281 >UniRef50_C7REF2 Transcriptional regulator, RpiR family n=2 Tax=Anaerococcus RepID=C7REF2_ANAPD Length = 279 Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 90/286 (31%), Positives = 155/286 (54%), Gaps = 8/286 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M Y KI +FT ++ KIA ++ E+ ++S+++A G SQS+I++F QK+G Sbjct: 1 MTYTIKIKERSEDFTPSDTKIAKYILDKPGEVIKINSQKLADLTGTSQSAIIRFVQKIGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSS-ITSDDSLEVIARKLNREKELALEQTCAL 119 +G+T L++ + + S E ++L S I++DD + I K ++E+T AL Sbjct: 61 KGYTSLKLDI----AKSLENDE---INLKSEVISADDKVGDIIEKSKINVISSIEKTYAL 113 Query: 120 LDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQA 179 +D ++ K I+ I A F+ + G+G S LV D +KL + G + E D H ++ Sbjct: 114 IDEDQISKAIDNIVYANFVYLAGIGSSGLVCEDFLYKLQRSGKKAFYETDAHTNLSLLTN 173 Query: 180 LKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETE 239 +K+ D+ I I+Y+ KE+++ AE A+ GA +I+IT L ++ + E + Sbjct: 174 IKEDDLLICITYTALSKEVLIAAEYAKTIGAKLISITKAGRGKLANMSDILIPIPEIEKK 233 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 R ++S+R A +TD+LF G + N E +K + S ELT +LK Sbjct: 234 MRYGAISSRFASQIITDILFYGYISKNMDEVVKNLMVSKELTDKLK 279 >UniRef50_UPI0001BC57B3 oxygen-independent coproporphyrinogen III oxidase n=2 Tax=Fusobacterium RepID=UPI0001BC57B3 Length = 538 Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 70/236 (29%), Positives = 139/236 (58%), Gaps = 2/236 (0%) Query: 32 LQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNATALHLHSS 91 L S+ A+ + ++IV+F++KLG +GF + +++L + + +++ +H Sbjct: 286 LNSIEKEMKAENIYQGGTNIVRFSKKLGFKGFPDFKLSLSQDIGNRKAESHVNIMH--EE 343 Query: 92 ITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPFIQITGLGGSALVGR 151 I D+ E+I +K+ E +A+ T + D+ L+K +++IS+A I + G+G S +V + Sbjct: 344 IKPTDTFEIIGKKVATENTMAVNNTYEITDFKELEKAVKMISEARKIMLAGVGFSGIVAK 403 Query: 152 DLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQGAT 211 D FKL+++G + E DTH+Q + + + DV IS+SG E+ A+AA+ + Sbjct: 404 DFHFKLLELGKQTLFENDTHMQLSYLATMNENDVLFVISHSGKTLEVFNLAKAAKNRKVK 463 Query: 212 VIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDLLFVGLVQLND 267 +I +TS+ SP+R L L TV ++++R++++S R +Q +V D++++ L+ N+ Sbjct: 464 IITLTSVVQSPIRELGDIKLSTVEMKSDFRATALSPRISQLTVIDMIYIKLMLENE 519 >UniRef50_B0N1V0 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0N1V0_9FIRM Length = 277 Score = 140 bits (352), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 85/263 (32%), Positives = 147/263 (55%), Gaps = 8/263 (3%) Query: 6 KISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTE 65 KI A S +T E+ IA ++ N +++ S++ + ++ G S ++I++F++KLG GF+E Sbjct: 6 KIKEAQSSYTSTEKVIAKYILENAADVLKCSAQSLGEKTGTSAAAIIRFSKKLGYNGFSE 65 Query: 66 LRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARL 125 L+M+L A EK + I +D + +A K R + +T L+D +L Sbjct: 66 LKMSLAQSKRAPEEKIDFI-------IDENDDIVTLADKCCRLNMNTVLKTYQLIDTNQL 118 Query: 126 QKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDV 185 I+ + A I + G+GGSA+V +D+ KL +IG +V D HVQ T S+++ K D Sbjct: 119 DNAIKKLIAANTIYLFGVGGSAIVAQDVEQKLTRIGKKVIYNKDLHVQLTFSESMNKEDA 178 Query: 186 QIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSM 245 + ISYSG+ K +V A+ + + +I+IT +PL +L+ L + E E R ++ Sbjct: 179 ALFISYSGTTKGLVEIAKMIKNKNVPIISITQFKPNPLSKLSDIILQVPNEEKEIRMGAI 238 Query: 246 STRTAQNSVTDLLFVGLVQLNDV 268 S+R + +TDLL+ G+ + ND+ Sbjct: 239 SSRISSLVMTDLLYYGVFK-NDL 260 >UniRef50_C6Q8T9 Transcriptional regulator, RpiR family n=1 Tax=Thermoanaerobacter mathranii subsp. mathranii str. A3 RepID=C6Q8T9_9THEO Length = 282 Score = 140 bits (352), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 90/278 (32%), Positives = 146/278 (52%), Gaps = 11/278 (3%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 LT I + F +E KIA ++ N + +S ++A+ S++SIV+F + +G +GF Sbjct: 5 LTVIKELEATFKPSEAKIAKYILDNADVVTELSINELARACDTSEASIVRFCRTIGLKGF 64 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 EL++ + S +K L IT DD + + +K+ + A++ T +LLD Sbjct: 65 QELKIKIAVSLSKQTKK-------LDGGITDDDDVSDVIQKIANFNKQAIDNTISLLDVK 117 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 + K ++ +S A I G+ S V D K +I DTH+Q T + LKKG Sbjct: 118 SIIKAVDALSNANKIDFYGVAASGTVAYDAMLKFARINIPCTAYQDTHLQLTSAANLKKG 177 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 DV ISYSG +EIV E A++ GAT I++T PL ++A L S E +RS Sbjct: 178 DVAFGISYSGCTREIVEALEVAKEAGATTISLTKFGQFPLVKVADINLFVSSEEPLFRSG 237 Query: 244 SMSTRTAQNSVTDLLFVGLV--QLNDVESLKMIQRSSE 279 + ++R AQ +V D+LF+ + + NDV +K ++ ++E Sbjct: 238 ATASRIAQLTVIDILFILVAKRKYNDV--VKFLENTTE 273 >UniRef50_A4F6M8 RpiR-family transcriptional regulator n=7 Tax=Actinomycetales RepID=A4F6M8_SACEN Length = 308 Score = 139 bits (351), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 81/247 (32%), Positives = 141/247 (57%), Gaps = 4/247 (1%) Query: 18 EQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSAS 77 EQ++A+ + A+ + + S ++A+ G S++++ +F + +G G+ +LR+AL +A Sbjct: 30 EQRVANIVLADPASVARRSITEVAEAAGTSETTVTRFCKAIGVGGYPDLRIAL----AAD 85 Query: 78 REKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPF 137 +T++ L S I +D + I K++ A+E+T LD L+ +++ +++A Sbjct: 86 TARTSSRDRDLGSDIGPEDDVRKIIEKVSYADAKAVEETADQLDAETLRSLVDAVARARR 145 Query: 138 IQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKE 197 I + G+G SA V DL KL +IG +DTH T + L++GDV I IS++G+ E Sbjct: 146 IDVYGVGASAFVALDLQQKLHRIGLTCFAWSDTHNALTSAAVLREGDVAIGISHTGATTE 205 Query: 198 IVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDL 257 V + A K+GAT A+T+ SP+ +A L T ET +RS +M++R Q +V D Sbjct: 206 TVEALQEAGKRGATTAALTNFARSPITEVADHVLTTAVRETTYRSGAMASRIGQLTVIDC 265 Query: 258 LFVGLVQ 264 LF+G+ Q Sbjct: 266 LFIGVAQ 272 >UniRef50_C8NZR0 RpiR family transcriptional regulator n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZR0_ERYRH Length = 280 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 80/261 (30%), Positives = 149/261 (57%), Gaps = 7/261 (2%) Query: 14 FTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGE 73 +T+ E++IA+++ N E+ + SS+ AK++ S ++IV+F++K+G GFT L++ L + Sbjct: 14 YTDTEKRIAEYILENKDEVVNFSSQHFAKEINSSAAAIVRFSKKIGYNGFTHLKVELARD 73 Query: 74 YSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVIS 133 +S + + I +D++E + RK + + T LL+ L I IS Sbjct: 74 HSEEEQSFDKL-------IKEEDTIETMVRKSHYSNHRTFDNTYKLLNLEVLDASIAAIS 126 Query: 134 KAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSG 193 A I + G+GGS +V +DL K ++I V D H++ + + + DV IA+SYSG Sbjct: 127 NARRIYLLGIGGSGIVCQDLYHKFVRIDADVVYFDDFHLEMSSLTHITENDVTIALSYSG 186 Query: 194 SKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNS 253 +EI++ + A+ +GAT IAIT + + L + + F ++ E+E R S+++R + + Sbjct: 187 QTREIIMAQKLAQDKGATTIAITQVGRNELAKNSDFVINIPKEESEVRLGSIASRFSMLA 246 Query: 254 VTDLLFVGLVQLNDVESLKMI 274 ++DLL++G+ + N E+ + I Sbjct: 247 ISDLLYLGVAKNNIEETRRKI 267 >UniRef50_C5B7U9 Transcriptional regulator, RpiR family protein n=1 Tax=Edwardsiella ictaluri 93-146 RepID=C5B7U9_EDWI9 Length = 225 Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 81/200 (40%), Positives = 122/200 (61%), Gaps = 4/200 (2%) Query: 7 ISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTEL 66 +S AG++ +E+K+ADF+ ++ +L +SS+++A LGISQSS+VKFA+KLG +GF L Sbjct: 27 LSFAGTK--RDERKLADFILSSPEQLGKLSSQELANTLGISQSSVVKFAKKLGFRGFPAL 84 Query: 67 RMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQ 126 + + + N ALH I D L+V+ KL EK AL+ T + +LQ Sbjct: 85 KQDISAHLLRHQAPANEAALH--HGILRHDPLKVVGEKLMAEKIAALQSTLTINHEEQLQ 142 Query: 127 KIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQ 186 + + ++ A I ITGLG S LV RD + KLM+IG E+DTH+Q +QA++ D+ Sbjct: 143 RALRMLLGARRIVITGLGASGLVARDFANKLMQIGLAAYAESDTHMQIACAQAMQPQDLL 202 Query: 187 IAISYSGSKKEIVLCAEAAR 206 +AISYSG +KE+ + A R Sbjct: 203 MAISYSGERKEVNIAAATPR 222 >UniRef50_A6LUR0 Transcriptional regulator, RpiR family n=2 Tax=Clostridium RepID=A6LUR0_CLOB8 Length = 281 Score = 137 bits (345), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 84/254 (33%), Positives = 143/254 (56%), Gaps = 5/254 (1%) Query: 14 FTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGE 73 FT+ E+ IAD+L + S+S+R +A+ S ++V+FA+K+G EL++ L Sbjct: 14 FTDREKLIADYLIETKERIISMSARDIAEATKTSAPTVVRFAKKIGFNTLNELKLKLSIN 73 Query: 74 YSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVIS 133 S E A A+ + +D + I + + + +EQT +LLD L K IE++ Sbjct: 74 ISKEEE---AGAIQFQY-LDNDLGTKNIIYGIKQSVDSIMEQTVSLLDEECLDKAIELLI 129 Query: 134 KAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSG 193 A I I +G S LVG+D +KL ++ R C DTH+Q T S L++GDV +AISYSG Sbjct: 130 SAKNIYIFSVGVSGLVGQDFYYKLSRMNKRCICNTDTHLQITSSVLLEEGDVALAISYSG 189 Query: 194 SKKEIVLCAEAARKQGATVIAITSLT-DSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQN 252 KE++ C + AR + VIAIT + ++ + ++ + + E R ++S+R +Q Sbjct: 190 ETKEVIKCVKNARNRKVPVIAITKASVNNTIADISDIVIRIPAVEKSIREGAISSRISQL 249 Query: 253 SVTDLLFVGLVQLN 266 ++ D+L++G+++ N Sbjct: 250 AIIDMLYIGMIRNN 263 >UniRef50_A8RRF4 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A8RRF4_9CLOT Length = 289 Score = 137 bits (344), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 79/261 (30%), Positives = 142/261 (54%), Gaps = 4/261 (1%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L +I ++ + E+ + FL+ N E S +Q+A + S ++IV+ +K+G G+ Sbjct: 5 LVRIQEYSAQASGAEKGVLRFLRENPEEAAGYSIKQLADKTFSSAATIVRLCRKMGFDGY 64 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 EL+ +L+ E + RE T + I DDSLE + K+ + ++L+ T L+D Sbjct: 65 KELQKSLLYESALRRESTRP----MEQEIKKDDSLEELVNKVTYKNIVSLDNTRKLVDLD 120 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L + +E++ ++ + + G+G S LV RD+ KL+++ D H Q ++ ++ Sbjct: 121 ILNQCVELLDRSQTVYLFGIGSSLLVARDMYLKLLRVNKACVICDDWHAQLLQARNIRSC 180 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 D+ + +SYSG +E++ CA AR + A VI I+ SPL RLA + L + E +RS Sbjct: 181 DLALIVSYSGLTEEMITCAREARLREAPVITISRFEQSPLVRLADYNLAVAATELIFRSG 240 Query: 244 SMSTRTAQNSVTDLLFVGLVQ 264 +MS+R +Q ++ D+L+ V Sbjct: 241 AMSSRISQLNMIDILYTAYVH 261 >UniRef50_C4V1J5 RpiR family transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1J5_9FIRM Length = 282 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 82/255 (32%), Positives = 141/255 (55%), Gaps = 7/255 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 ++L I + T++E+KIA+++ + + + + ++A+++G S +SIV+F + G + Sbjct: 5 VFLQLIEDKLGTLTKSEKKIAEYILEHPNRVVDATITELAERIGTSDASIVRFCKLFGCK 64 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ ++ L E ++ N AL H D +L + + N E L +T +L+ Sbjct: 65 GYQNFKIRLAREVVPHYKQLNV-ALEQH-----DTALTICQKIFNTEIA-TLHETLEMLN 117 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 LQ + + I +A +I++ G GGS++V +D+ K +K+G R D +QA + LK Sbjct: 118 VEHLQTMAQRIREADYIEVFGSGGSSVVAQDIRHKFLKVGIRCTVLLDADIQAMSASLLK 177 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 KGDV I IS++GS K + C + ARK GA VI +T+ SP+ R+A + S ET ++ Sbjct: 178 KGDVAIGISHTGSTKSVFHCLKMARKNGAYVILLTTQAKSPIGRIADLVIPVGSKETLFK 237 Query: 242 SSSMSTRTAQNSVTD 256 S S S R A+ V D Sbjct: 238 SESTSARIAELVVMD 252 >UniRef50_C0ZD50 Transcriptional regulator n=32 Tax=Bacillales RepID=C0ZD50_BREBN Length = 288 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 82/260 (31%), Positives = 139/260 (53%), Gaps = 8/260 (3%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 LT++ ++ + EQ+IAD++ + SE+ S ++A Q + +++ + ++LG +G+ Sbjct: 12 LTQLRAIYTQLSGKEQQIADYILEHASEIIHFSITELADQCQCADATVFRLCRRLGFRGY 71 Query: 64 TELRMALIGEYSASREKTNATALHLHSSIT-SDDSLEVIARKLNREKELALEQTCALLDY 122 ++AL E + ++ +H I DD + IA K+ + T +++ Sbjct: 72 QAFKIALASEVTNPKQT-------IHQEINLDDDDVSAIAEKIFTANIETIRDTQQIINK 124 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 L KI+ + A I+ G GGSA++ +D K M+ G +D H Q + L K Sbjct: 125 DELMKIVSCLENASRIEFYGSGGSAVIAQDAYHKFMRTGIPCLYHSDAHYQVMSASLLTK 184 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 G V + IS+SGS K+I+ + A++ GA I ITS SPL RLA L T S ET +R+ Sbjct: 185 GAVVVGISHSGSNKDILAALQVAKEAGAKTIGITSYGKSPLVRLADMCLYTTSRETVFRT 244 Query: 243 SSMSTRTAQNSVTDLLFVGL 262 ++S+R AQ S+ DLL+V + Sbjct: 245 EALSSRLAQLSLIDLLYVAV 264 >UniRef50_C6WFA6 Transcriptional regulator, RpiR family n=2 Tax=Actinomycetales RepID=C6WFA6_ACTMD Length = 304 Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 85/267 (31%), Positives = 140/267 (52%), Gaps = 4/267 (1%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L KI + EQ++A + N + + S ++A+ G S++++ +F + +G G+ Sbjct: 11 LVKIRSLLPGLARAEQRVAKVVLDNPATVAHRSITEVAESAGTSETTVTRFCKAIGVGGY 70 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 ELR+AL + + T L I D L + K+ A+E+T L+ Sbjct: 71 PELRIAL---AADTARTAARTDRDLGGDIGPGDDLRQVVGKVAFADARAVEETAEQLNVD 127 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 LQ +++ +++A + + G G SA V DL KL +IG DTH+ T + L Sbjct: 128 TLQAVVDAVARAGRVDVYGFGASAFVAFDLQQKLHRIGRTCFAWNDTHIALTSAAVLTGA 187 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 DV + IS++GS E V AR++GAT +A+T+ SP+ +A L T + ET +RS Sbjct: 188 DVAVGISHTGSTTETVEALRVARERGATTVALTNFPRSPISEVADHVLTTAARETTFRSG 247 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVES 270 +M++R AQ +V D LF+G+ Q + VES Sbjct: 248 AMASRIAQLTVVDCLFIGVAQ-HHVES 273 >UniRef50_C0CSK7 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CSK7_9FIRM Length = 282 Score = 133 bits (335), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 87/272 (31%), Positives = 147/272 (54%), Gaps = 7/272 (2%) Query: 14 FTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGE 73 T E+KIA+++ N ++ + + ++A+ +S +S+V+F + LG +G+ + ++ + Sbjct: 17 LTNTERKIANYVLENYDQVLNSNITELAENAKVSDASVVRFCRSLGYKGYQDFKINAAKD 76 Query: 74 YSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVIS 133 REK HL+ + DS ++I K+ + LE+T A L+ ++K + I Sbjct: 77 V-LPREK------HLNPILEESDSPDMICHKIFNLEISVLERTLASLNMREVEKAAQFIF 129 Query: 134 KAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSG 193 + G GGS LVG+D K MKIG +V D +Q S +GDV I IS+SG Sbjct: 130 HGKRVLFFGSGGSLLVGQDALHKFMKIGVQVYVHEDRDLQLMASSLAGEGDVVIGISHSG 189 Query: 194 SKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNS 253 S ++ C + A++ GA IA+ S +PL ++A +DT S ET ++S S+STR AQ + Sbjct: 190 SNYSVLRCLKNAKENGAQTIALVSRGKTPLSKIADVVIDTASEETIFQSESVSTRIAQLA 249 Query: 254 VTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + D L + +N ES + IQ++ + T K Sbjct: 250 IIDSLVSIVAFMNYDESYRAIQKTRKATSENK 281 >UniRef50_C0ZJF9 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZJF9_BREBN Length = 297 Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 76/266 (28%), Positives = 145/266 (54%), Gaps = 7/266 (2%) Query: 14 FTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGE 73 FT++EQK+A + + S +A++ G+ ++++++F +K+G G+ E ++AL Sbjct: 32 FTKSEQKVAHIVLQQTDSVIYSSVIDLAEKAGVGETTVLRFCRKIGFHGYQEFKLAL--- 88 Query: 74 YSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVIS 133 ++E N +LH + DDSL++I K+ + A+ T AL +L++ ++++ Sbjct: 89 ---AQELVNPVK-NLHGEVGEDDSLDIITHKVTATNQQAIGDTSALFQLEQLERCVDLLQ 144 Query: 134 KAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSG 193 KA I G+G SA+ +D + ++IG RV ++H+QA + L GDV I +S SG Sbjct: 145 KANTIHFYGVGTSAVTAQDAKYTFLRIGLRVDAFNESHLQAMAAATLGPGDVAIGLSVSG 204 Query: 194 SKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNS 253 S K+ + + A++ GA I +T SP+ +A TL T + E + S++ + AQ Sbjct: 205 STKDTIDSLKVAKQAGAACICLTHYRRSPITNVADITLLTAAQEGPLQGGSLAAKIAQLH 264 Query: 254 VTDLLFVGLVQLNDVESLKMIQRSSE 279 V D++ + N ++L +R+++ Sbjct: 265 VLDVISTTITMRNKEKALLYKERTAK 290 >UniRef50_Q97MK5 Uncharacterized HTH-type transcriptional regulator CA_C0191 n=5 Tax=Clostridia RepID=Y191_CLOAB Length = 283 Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 83/284 (29%), Positives = 148/284 (52%), Gaps = 7/284 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L +I ++ +E+KIA+++ N + +S +++A + G S+S++V+ + L +G+ Sbjct: 5 LIRIKEIINDLNPSERKIAEYILNNSKAISDLSIKELAGKSGSSKSAVVRLCKILNYKGY 64 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 E R+A+ + ++ N ++ I D L I + ++ + +++ T +L Sbjct: 65 KEFRIAIAKDTVNVDKEENR-----YTDINPKDDLHTIIKNISYNNKKSIDNTMEVLSEE 119 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 ++K E ISKA + G+G S +V D K M+I V DTH+Q + LKKG Sbjct: 120 LVEKASEAISKAYRVDFYGIGASYIVAMDAFQKFMRINKNVRATPDTHLQVEFASNLKKG 179 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 DV +AISY+G K+ +AA++ GAT I++T + + L L +S E +RS Sbjct: 180 DVAVAISYTGETKDTFESIKAAKEAGATTISVTKFGSNSISDLCDINLFVLSPEITFRSG 239 Query: 244 SMSTRTAQNSVTDLLFVGLV--QLNDVESLKMIQRSSELTQRLK 285 +MS+R AQ +V D+LF + +V+ R S +R+K Sbjct: 240 AMSSRIAQLNVIDILFTSVAGRMFEEVKEFLENTRKSTRVKRIK 283 >UniRef50_A6LRF3 Transcriptional regulator, RpiR family n=2 Tax=Bacteria RepID=A6LRF3_CLOB8 Length = 294 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 76/270 (28%), Positives = 150/270 (55%), Gaps = 6/270 (2%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 Y KI N + +E+K+AD++ N + +++ ++++Q+G+S+ +I++F + +G G Sbjct: 7 YEYKIKNMYNLLRSSEKKVADYVLLNGHSVSTMTLAELSRQVGVSEPTIIRFVKSIGCSG 66 Query: 63 FTELRMALIGEY---SASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCAL 119 ++E +MAL+ E+ S ++ + + LH I D+ +E + K+ ALE T + Sbjct: 67 YSEFKMALMKEWGRESVDKQYDSKLLVELH--IDRDEKIEDVPVKMIGLTIKALEDTLKI 124 Query: 120 LDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQA 179 +D + +K IE+I + I + G+G S V D+ K ++IG +D+++Q + Sbjct: 125 IDINKYKKAIEMIRSSNIIDVYGVGNSGSVASDIRNKFLRIGLECRAYSDSNIQQICASH 184 Query: 180 LKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETE 239 L D+ I +S+SGS + V + A++ GA IA+T+ + A T T ET Sbjct: 185 LTSNDLAIGVSHSGSTIDTVNALKIAKESGARTIALTNFKAPAISEYADITFFTGGEETT 244 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVE 269 + S +M +R +Q ++ D+L++G++ L+D + Sbjct: 245 FYSETMVSRISQLAIVDMLYMGIL-LDDYD 273 >UniRef50_P26833 Uncharacterized HTH-type transcriptional regulator CPE0189 n=15 Tax=Clostridiales RepID=Y189_CLOPE Length = 279 Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 74/264 (28%), Positives = 147/264 (55%), Gaps = 5/264 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L ++ N + T++E+ + +++++++ + S +AK+ G+ +++I +F +KLG Sbjct: 1 MGILEQLENPKFKATKSEKTLIEYIKSDLDNIIYKSISIIAKESGVGEATITRFTKKLGF 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF + ++ L E S +++ T+ LH+H D+S+ A K+ + LEQT + Sbjct: 61 NGFQDFKVTLAKEIS-NKKNTSIINLHVHR----DESVTETANKMLKSSINILEQTVKQI 115 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D + K ++I A + G+G S + D+++K M+IG+ D+H +S Sbjct: 116 DLDLMCKCRDLIMNAKRVYFIGIGYSGIAATDINYKFMRIGFTTVPVTDSHTMVIMSSIT 175 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 DV +AIS SG+ KE++ + A++ G +I +T +D+PLR+L+ + L S ET + Sbjct: 176 NDDDVIVAISNSGTTKEVIKTVKQAKENGTKIITLTEDSDNPLRKLSDYELTYTSAETIF 235 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQ 264 + S+S++ Q + DLL+ +++ Sbjct: 236 ETGSISSKIPQIFLLDLLYTEVIK 259 >UniRef50_C4L752 Transcriptional regulator, RpiR family n=4 Tax=Bacillales RepID=C4L752_EXISA Length = 282 Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 80/258 (31%), Positives = 145/258 (56%), Gaps = 7/258 (2%) Query: 6 KISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTE 65 +I A S ++ EQ+IAD++ ++ + Q+A L +++S++ +F Q++G +G+ Sbjct: 9 RIRGAYSTLSKKEQRIADYILKQPEQIIHHTINQVADDLDVAESTVFRFCQRVGFKGYQA 68 Query: 66 LRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARL 125 L++AL + A + +H IT D+ IA K+ +E T +L+ L Sbjct: 69 LKIALASDVVAPLQD-------IHEDITETDTALEIAEKIFSTNGKTIESTRQILEGVSL 121 Query: 126 QKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDV 185 +K +E+ A I+ G GGSA+V D K ++ G +V+ ++H+Q + L DV Sbjct: 122 EKAVELFLGARRIEFFGSGGSAVVALDAYHKFVRSGLQVSAMLESHMQLMSASQLTTADV 181 Query: 186 QIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSM 245 + IS+SG+ KE + A+ +++G +IAIT+ SPL ++A +L TVS ET +RS ++ Sbjct: 182 AVVISHSGASKETLDIAKLLKEKGVPMIAITNYAKSPLSKIADVSLYTVSQETAFRSEAL 241 Query: 246 STRTAQNSVTDLLFVGLV 263 ++R A+ S+ D LF ++ Sbjct: 242 ASRIAELSLIDALFTAVM 259 >UniRef50_C1I531 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I531_9CLOT Length = 284 Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 76/256 (29%), Positives = 136/256 (53%), Gaps = 4/256 (1%) Query: 12 SEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALI 71 SE T+ E KI D+++ ++ ++ ++A G+ ++++ +F +KLG + F E +M + Sbjct: 10 SELTKAENKICDYIEEYMNSSIYMTVTEIANNCGVGEATVTRFCRKLGFRSFLEFKMTMA 69 Query: 72 GEYSASREKTNATALHLHSSITS-DDSLEVIARKLNREKELALEQTCALLDYARLQKIIE 130 E+ S + S + S +DSL +K +LE+T +DY+ +++I + Sbjct: 70 QEFKNSGYDNEDI---IESEVVSENDSLGEFVKKFYEINVNSLEETLKKIDYSMIEEISD 126 Query: 131 VISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAIS 190 ++ KA I TG+G S ++ D +K MKIG C D+H ++ +K+GDV IS Sbjct: 127 ILVKAKRISFTGVGHSGIIAEDAYYKFMKIGLICNCYRDSHTLVMMASLMKEGDVLFIIS 186 Query: 191 YSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTA 250 SG+ +EI + AE AR+ VI+IT S L R++ + L+ E + S R + Sbjct: 187 NSGNTEEINIAAEIARENNVKVISITENLLSKLARVSDYVLNYTDQEIKIDMESFGIRIS 246 Query: 251 QNSVTDLLFVGLVQLN 266 QN + DL+ +++ N Sbjct: 247 QNFLIDLICTNVIRKN 262 >UniRef50_C0Z7S3 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z7S3_BREBN Length = 288 Score = 130 bits (327), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 79/273 (28%), Positives = 153/273 (56%), Gaps = 6/273 (2%) Query: 13 EFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIG 72 + +E+K+AD++ A+ ++ +S +++A+ G+S+++I++ A+ L +G+ EL++ + G Sbjct: 18 QLKPSERKVADYILAHPEDVVKLSVQKLAEYSGVSEATIIRLARSLNMKGYQELKLRVAG 77 Query: 73 EYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVI 132 + T TA + I + S+E I + ++ +++ T ++L ++K ++V+ Sbjct: 78 DL------TKQTARGSYQEIMMEGSVESIMQAVSWNNIQSIQDTLSVLSNEEVKKAVDVL 131 Query: 133 SKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYS 192 S A I + G+G SA++ D+ K +I +D H Q T + L + DV I ISYS Sbjct: 132 SVARKIDVYGVGASAVIADDIRQKFSRINLWCEAYSDFHAQLTSAVTLTEKDVVIGISYS 191 Query: 193 GSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQN 252 G ++I+ A++QGAT+I +T SP+ LA+ L T S E RS +M++R AQ Sbjct: 192 GQTEDIIQSLTEAKQQGATIITLTKFGPSPVAELANIRLFTSSVEKSIRSGAMASRIAQL 251 Query: 253 SVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +V D+LF+ ++ + ++++S R K Sbjct: 252 NVIDILFITMISRMQERVIPLLEKSRLAVSRTK 284 >UniRef50_A6LVH8 Transcriptional regulator, RpiR family n=8 Tax=Firmicutes RepID=A6LVH8_CLOB8 Length = 282 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 80/261 (30%), Positives = 135/261 (51%), Gaps = 6/261 (2%) Query: 6 KISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTE 65 KI + + + EQ IAD++ N + S ++ +L ++ S++ +FA+KLG GF E Sbjct: 8 KIKSLYNGLSAKEQNIADYILENPISVAHNSISYLSDELNVADSTLFQFAKKLGYSGFKE 67 Query: 66 LRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARL 125 +MA++ E+ N + +H I DD+ +A+K+ L T +L L Sbjct: 68 FKMAIL------IEENNFSTTSIHEKIEIDDNELTMAQKVFDSNIKTLTNTKKILGLDDL 121 Query: 126 QKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDV 185 +K E+IS + + G+GGS ++ D K ++ V D H+Q + L D Sbjct: 122 KKAAEIISNSNLLYFFGVGGSGILAEDAYHKFLRSPAHVRHSTDYHIQLMEASLLTPQDC 181 Query: 186 QIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSM 245 I IS++G KE + AE ++ GA VI ITS SPL ++ ++S E E+ S ++ Sbjct: 182 AICISHTGKSKETIRIAEIVKEAGAKVIVITSHASSPLAKIGDVVFISISEEIEFHSEAL 241 Query: 246 STRTAQNSVTDLLFVGLVQLN 266 S+R +Q S+ D L+V L+ +N Sbjct: 242 SSRISQLSILDSLYVILMFMN 262 >UniRef50_C2D9G3 RpiR family transcriptional regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9G3_9ACTN Length = 285 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 82/253 (32%), Positives = 130/253 (51%), Gaps = 9/253 (3%) Query: 16 ENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGE-Y 74 E EQ IA F+ +V E ++ ++A +LG++ S+I KFAQK+G +GF + R L+ E Y Sbjct: 19 EKEQAIAQFILQHVRETSYMTIHELADKLGVADSTIFKFAQKMGYKGFRDFRNDLLTEAY 78 Query: 75 SASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISK 134 + +H IT+ DSL IA + +L T ALL+ L++ + +I+ Sbjct: 79 DPE--------VSVHEHITTRDSLATIAATIFHSSVTSLHNTLALLNEDNLKRALSLINN 130 Query: 135 APFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGS 194 A + G GGS +V D K ++ D H+Q + L DV I IS+SG Sbjct: 131 AHTLTFFGCGGSNIVAADAYHKFLRSPLHCQNAIDEHIQIMQASLLGAQDVAIIISHSGL 190 Query: 195 KKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSV 254 + + AE R+ +I ITS ++P+ R A + S ET +RS S+++R AQ + Sbjct: 191 SRTTLQIAEILRENRVPIIFITSYLNTPITRFADVVFISASEETGYRSESLASRVAQLVI 250 Query: 255 TDLLFVGLVQLND 267 D LF ++ +D Sbjct: 251 LDTLFCAVMFKSD 263 >UniRef50_C4KZ09 Transcriptional regulator, RpiR family n=85 Tax=Bacillales RepID=C4KZ09_EXISA Length = 301 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 79/262 (30%), Positives = 148/262 (56%), Gaps = 7/262 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 LTKI A + T E+KIAD++ ++ + + +++++++A++ +S++SIV+FA+ +G F Sbjct: 24 LTKIDLAKEDMTAVEKKIADYILSHSTLIPNMTTKELAQKTDVSEASIVRFARVVGIDSF 83 Query: 64 TELRMALIGEYSASREKTNATALH-LHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 ++AL+ + + + +T T + L T DS + K+ + A+E +D Sbjct: 84 KAFKLALVKDLAVT--ETTLTDFNVLQQKDTPYDSFQ----KVIHVNKAAIEACAEAMDK 137 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 L+ +++ ++A + G+GGS+ D +K K+GY D H ++ L K Sbjct: 138 RELEHAVDLFARASRVIFYGVGGSSTAAIDAQYKFTKLGYAATTSPDFHYMLSLIPHLGK 197 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 DV +AIS SG K+++ A+K+ VIAIT+L SPL R A L T + E+++R Sbjct: 198 SDVFVAISTSGRTKDVLELVRFAKKKRVPVIAITNLDKSPLYREADVRLCTPNVESDFRI 257 Query: 243 SSMSTRTAQNSVTDLLFVGLVQ 264 +S+++R Q ++ D L++GL+ Sbjct: 258 ASIASRMTQLTIIDTLYMGLLH 279 >UniRef50_B1QW74 Transcriptional regulator n=2 Tax=Clostridium butyricum RepID=B1QW74_CLOBU Length = 281 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 88/274 (32%), Positives = 153/274 (55%), Gaps = 12/274 (4%) Query: 15 TENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEY 74 TE+E+KIAD++ N SE+ S+ ++A S SS+V+F++KLG +GF E ++ L Sbjct: 15 TESEKKIADYVLVNSSEVYKFSASELANITKTSSSSVVRFSRKLGFEGFQEFKIEL---- 70 Query: 75 SASREKTNATALHLHSSITSDDSL-EVIARKLNREKELALEQTCALLDYARLQKIIEVIS 133 +++ N + I ++D++ EVI + N+ + ++ T +LLD +++ I+ I Sbjct: 71 --AKDDINPVENIEYDYIDTEDNIREVIVKTANKNIQ-SINDTISLLDEHTIEEAIKAIK 127 Query: 134 KAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSG 193 A I I G+G SAL+G DL +KL++I ++HVQ ++S + D+ I ISY G Sbjct: 128 NAKNIYIFGIGESALIGLDLQYKLLRIHKNAMISLESHVQLSMSANISNDDIAIGISYLG 187 Query: 194 SKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNS 253 KE+ +++GA I IT ++P+ L + E + R ++S+R Q + Sbjct: 188 KTKEVYSALSKCKEKGAKCITITKFGENPVSSLGDIKIQVPFVEKDLRIGAISSRIVQLT 247 Query: 254 VTDLLFVGLVQLN--DVESLKMIQRSSELTQRLK 285 V D+LFVGL + N DVE K ++ + + + L+ Sbjct: 248 VIDILFVGLAKENFSDVE--KYLKETRNMIEELR 279 >UniRef50_C9AZQ1 Phosphosugar isomerase transcriptional regulator n=2 Tax=Enterococcus casseliflavus RepID=C9AZQ1_ENTCA Length = 283 Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 77/249 (30%), Positives = 135/249 (54%), Gaps = 6/249 (2%) Query: 18 EQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSAS 77 EQ IAD++ N S++ S ++ +LGI+ S+ +F +KLG GF + +MA++ Sbjct: 20 EQAIADYILENPSKVSHSSISDLSNELGIADSTFFQFTKKLGYNGFKDFKMAML------ 73 Query: 78 REKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPF 137 ++ + +A+ +H +I D+ +A+K+ L T LL L+ +I+++ Sbjct: 74 MQENDFSAISIHENIQKSDNELTMAQKVFDSNMTTLTDTKNLLKEEDLKLAAAMINQSKR 133 Query: 138 IQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKE 197 + G+GGS +V D K ++ V +D H+Q + L D I IS++G +E Sbjct: 134 LFFFGVGGSEIVATDAYHKFLRSPITVFHSSDYHIQLMEASLLTPDDCGIFISHTGKSRE 193 Query: 198 IVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDL 257 + A+ A+ GA +I ITS SPL +L ++S ETE+RS ++++R AQ S+ D Sbjct: 194 TIELAQVAKNNGAKIIVITSHAASPLAKLGDVVFISISEETEFRSEALASRIAQLSIMDS 253 Query: 258 LFVGLVQLN 266 L+V L+ +N Sbjct: 254 LYVILMFIN 262 >UniRef50_A8RI47 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RI47_9CLOT Length = 285 Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 71/247 (28%), Positives = 135/247 (54%), Gaps = 7/247 (2%) Query: 16 ENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYS 75 +NE KI +F++ N E+ +S A+ G+S+++IV++AQKLG +G+ +++++ Sbjct: 22 KNEMKIYEFIEINRKEIIHMSVADAAEACGVSEAAIVRYAQKLGYKGYQAMKISI----- 76 Query: 76 ASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKA 135 + ++ ++ D++ I K+ +L T +L + + + +I Sbjct: 77 --AQDVIEPGQQIYGQLSKGDTIPTIVDKIFDSNIQSLRDTSDVLSRENIDEAVNLILGC 134 Query: 136 PFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSK 195 + G+GGS V D K +KIGY D+++QA + L DV +A+S+SG+ Sbjct: 135 RRLLFFGVGGSGCVAMDGQHKFLKIGYMAMAFTDSNLQAMAASVLTSRDVLVAVSHSGAS 194 Query: 196 KEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVT 255 K+I++ + A++ GA IAIT+ SP+ A L T S ET + S ++S+R A+ ++ Sbjct: 195 KDILMAMDIAKQSGAKTIAITNYGKSPIVEKADVVLYTSSNETAFNSDALSSRIAELTII 254 Query: 256 DLLFVGL 262 D+L++G+ Sbjct: 255 DMLYIGV 261 >UniRef50_A8FJ30 Possible RpiR family transcriptional regulator n=51 Tax=Bacillus RepID=A8FJ30_BACP2 Length = 285 Score = 126 bits (316), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 79/276 (28%), Positives = 146/276 (52%), Gaps = 6/276 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 + KI A + IA+ + + ++ +S ++AK+ S+++I + ++LG +GF Sbjct: 9 IEKIRAASRGLPPKLKAIAEHITSEPRDIIHLSIVELAKKTASSEATIFRLCKRLGFEGF 68 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 +L++A+ E ++ ++ ++ DD + V +K+ + AL+ + LL+ Sbjct: 69 QDLKIAIAQEIDQTKPN------YVDEEMSLDDDMAVFMQKVFQTNISALKDSFQLLNPE 122 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 ++K I++I +A ++ G GGS L+ D K M+ G D+H QA + L + Sbjct: 123 DVEKAIQIIHEAKRLEFYGSGGSGLIATDAFHKFMRTGINCIVHTDSHFQAMSAGLLDQH 182 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 I IS+SG K+++ + A+ +GA I ITS SPL +LA TL T + ET +R+ Sbjct: 183 STVIGISHSGRNKDLLDAMKTAKSKGAKTIGITSYQRSPLSQLADVTLYTATQETAFRTE 242 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSE 279 +MS R AQ +V D+L+ L L E++ +++ E Sbjct: 243 AMSARLAQLTVIDVLYFALAHLRQQETITNLKQMRE 278 >UniRef50_UPI000197BCAC RpiR family transcriptional regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197BCAC Length = 283 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 79/257 (30%), Positives = 141/257 (54%), Gaps = 5/257 (1%) Query: 6 KISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTE 65 K+ A + E+++A+++ AN +QS+S + +A++ +S ++I++ KLG QGF++ Sbjct: 5 KLREARDSLSTKEKQVAEYIIANKKNMQSMSIQSLAQENKVSTTTILRLCHKLGYQGFSD 64 Query: 66 LRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARL 125 L++ LI S+ K+ T L I +DS+E + K+ ++ ++E+TCAL++ Sbjct: 65 LKIDLI---SSINHKSYGTLLQ--EDIDINDSMETVNHKVGLIEKSSIEETCALVNLNAF 119 Query: 126 QKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDV 185 + E+ISK+ I I G G S LV ++ ++L+KI V C D +Q ++ L + D+ Sbjct: 120 KLANELISKSKKIVIYGAGSSGLVAKEFEYQLIKIKKDVNCHLDYSIQFSIVNTLDQNDL 179 Query: 186 QIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSM 245 I IS+SG E + AR+ IAIT + S + LA L T+S E R + Sbjct: 180 VIVISHSGENHECIKLLTLARELKVPTIAITKMGQSSVSSLAETVLHTISTEHVSRLIPI 239 Query: 246 STRTAQNSVTDLLFVGL 262 ++ +Q +V ++L L Sbjct: 240 RSKISQLTVINMLITNL 256 >UniRef50_C1PDB4 Transcriptional regulator, RpiR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PDB4_BACCO Length = 283 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 81/260 (31%), Positives = 135/260 (51%), Gaps = 7/260 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L +I SEF+ E+KIAD++ N L + Q+A QL ++ +++ +F +++G GF Sbjct: 11 LHRIQTMYSEFSAKERKIADYILENPQRLVHSTINQVADQLLVADATVFRFCKRIGFSGF 70 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 L++AL E A+R N + ++ D+ + +A K+ L+ T L+ Sbjct: 71 QALKIALAAE--AARPGKN-----MDEAVKDTDNEKAVAIKVFESNIETLQDTIHTLNQK 123 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L + +E I +A I G G ++++ D K ++ V D H+Q + K Sbjct: 124 HLHEAVEWICRAKHIVFYGCGSASVIALDALEKFLQTDLAVTAYTDPHLQLLSAARCTKE 183 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 DV + IS++G+ KE++ +A +K GA IAIT SPL + A L TVS E ++R S Sbjct: 184 DVAVFISHAGADKEMLKLLQAVQKTGAKTIAITQFAKSPLSQKADVPLFTVSQEADFRFS 243 Query: 244 SMSTRTAQNSVTDLLFVGLV 263 S S R Q S+ D L+V ++ Sbjct: 244 SFSARIVQLSLIDTLYVNVM 263 >UniRef50_UPI000196C511 hypothetical protein CATMIT_02677 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C511 Length = 286 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 76/261 (29%), Positives = 146/261 (55%), Gaps = 8/261 (3%) Query: 6 KISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTE 65 +I +T E+ IA+++ N ++ S++ + ++ S ++I++F++K+G +GF++ Sbjct: 14 RIKEYNDSYTATEKLIAEYILEN--DILQDSAQALGEKTNTSAAAIIRFSKKIGFKGFSD 71 Query: 66 LRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARL 125 L+M L S EK L +D++ + K R + +T L++ L Sbjct: 72 LKMNL--AQSTKEEKQQEVDLIFEP----EDNISTLVEKGCRLNMNTVLKTYQLINIDTL 125 Query: 126 QKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDV 185 ++ I++++ A I + G+GGS+++G D+ KLM+IG +V AD HVQ T +Q++ + D Sbjct: 126 EESIDLLNNASTIYLFGVGGSSVIGLDIYQKLMRIGKKVIYNADLHVQMTFAQSMDQNDA 185 Query: 186 QIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSM 245 + ISYSGS +V A ++ VI+IT + +P+ +L+ ++L S E R ++ Sbjct: 186 ALIISYSGSTTGLVDVARVLHEKQIPVISITQINANPISKLSTYSLKVPSEEKALRIGAV 245 Query: 246 STRTAQNSVTDLLFVGLVQLN 266 S+R + +TDLL+ G+ + N Sbjct: 246 SSRISSFVITDLLYYGVFKKN 266 >UniRef50_C8W838 Transcriptional regulator, RpiR family n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W838_ATOPD Length = 304 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 86/265 (32%), Positives = 139/265 (52%), Gaps = 9/265 (3%) Query: 13 EFTEN----EQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRM 68 E+ +N E+ I D++ ++ + S ++A Q S S++V+ +KLG G+ E + Sbjct: 10 EYRKNASSAERDIIDYILSDPEAVVGQSIHKLAAQTYTSASTVVRLCKKLGCGGYKEFQQ 69 Query: 69 ALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKI 128 ALI E + S K+N A+ + + D+ +VI K+ + +LE T LLD + + Sbjct: 70 ALIYELAVS-NKSNDIAV---GGVIAGDTTDVIIEKVTAKNISSLELTMQLLDAQVVDSV 125 Query: 129 IEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIA 188 + ++ +A I + G+G S LV RDL KLM++ D H Q ++ + + D+ I Sbjct: 126 VSLMMQAHSICLFGMGASLLVARDLQLKLMRLNINCNLSDDYHSQLLYAKNMSREDLAIV 185 Query: 189 ISYSGSKKEIVLCAEAARKQGATVIAIT-SLTDSPLRRLAHFTLDTVSGETEWRSSSMST 247 +SYSG +E + CA A+ GA VI+IT DS L + + L E RS +MS+ Sbjct: 186 VSYSGLTREAIECAWIAKANGAKVISITRGGIDSELIHRSDYVLGVAETEHIMRSGAMSS 245 Query: 248 RTAQNSVTDLLFVGLVQLNDVESLK 272 R AQ +V D LF V N +S+K Sbjct: 246 RIAQLNVVDALFAAYVNRNYEKSVK 270 >UniRef50_D0GPL3 Transcriptional regulator, RpiR family n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GPL3_9FUSO Length = 285 Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 72/256 (28%), Positives = 144/256 (56%), Gaps = 8/256 (3%) Query: 12 SEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALI 71 ++ ++ E+ IAD++ N+++ +++ +A+ +G+ S+I F +KLG +GF E R +L+ Sbjct: 15 NDLSKKEKLIADYILKNINKSTNLTIADLAENIGVVNSTIFSFTKKLGFKGFREFRDSLL 74 Query: 72 GEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEV 131 R++ N+ +++H I+ +DS+ I K+ +LE T + + +++ Sbjct: 75 ------RDQFNSN-INVHEKISKNDSITSIIEKVFNSNIKSLEDTKKIAEKKSFSTALKI 127 Query: 132 ISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISY 191 +++ + G+GGS+++ D K ++ + ++D H+Q + L K D IS+ Sbjct: 128 LTQVDIVHFFGVGGSSVIAHDAYHKFLRSPLKCRFDSDFHLQLMQASLLTKNDCAFIISH 187 Query: 192 SGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQ 251 SG KE + A+ A+++ A +I +TS S L + A T + + E E+RS ++S+R AQ Sbjct: 188 SGMTKESIEIADIAKERKAKIIVLTSYPLSILAKKADITFISTAEEIEYRSEALSSRIAQ 247 Query: 252 NSVTDLLFVGLVQLND 267 S+ D +F+ LV LN+ Sbjct: 248 LSILDTIFI-LVMLNN 262 >UniRef50_A4VXR0 Transcriptional regulator n=5 Tax=Streptococcus suis RepID=A4VXR0_STRSY Length = 275 Score = 123 bits (308), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 75/272 (27%), Positives = 144/272 (52%), Gaps = 9/272 (3%) Query: 14 FTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGE 73 T E K+ D+++ N+ +++++ Q+A G+S ++I + ++K+G F +L++ + Sbjct: 13 LTPTENKLLDYIEENIHRIETMNIYQLADNAGVSTATISRISKKMGYSNFNKLKIEI--- 69 Query: 74 YSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVIS 133 ++ K + L++ T DS++ I+ KL ++ +QT + L+ L+ ++++ Sbjct: 70 ---AKSKYDDL---LNAHFTPSDSIDDISTKLIHSITISNQQTVSFLNLEELEAAVKLLQ 123 Query: 134 KAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSG 193 A I + G+G S +V D +KL +IG DTH+Q GD+ I ISYSG Sbjct: 124 SASRIYLFGVGASGIVCSDFYYKLSRIGKTCIFAQDTHIQMANIATAGNGDLAIGISYSG 183 Query: 194 SKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNS 253 KE+V A++ G + I IT + L LA T E E R ++++R+ Sbjct: 184 MTKEVVEPLRFAKENGVSTITITGTGKNQLADLADITFRIPRHEHELRVGAITSRSNSLF 243 Query: 254 VTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +TDLL++ L+Q + E +++++ LT+ +K Sbjct: 244 LTDLLYLALIQDHKQEITAILEQTKHLTEVIK 275 >UniRef50_UPI0001789683 transcriptional regulator, RpiR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789683 Length = 289 Score = 123 bits (308), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 73/255 (28%), Positives = 138/255 (54%), Gaps = 6/255 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L IS+ S T+ E+K+AD+++ E + ++++ G+ ++S+++F +KLG +GF Sbjct: 14 LLMISSIYSSLTKTEKKVADYVKGFPEETVLATVTDLSEKAGVGETSVIRFCRKLGFRGF 73 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 E ++ S +++ + + +SI D L +ARKL + E+ L+ T L++ Sbjct: 74 HEFKL------SVAQDLVDRPPSVVDTSIDEQDDLMTVARKLTMQHEILLKNTLDLVNAD 127 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L+ ++ + A + + G+G S + DL ++LM++G V D+H+ A + +KKG Sbjct: 128 NLRMAVDKLLAANKVYVYGVGSSGITALDLHYQLMRLGLNVEAHRDSHIIAMSASLVKKG 187 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 D+ AIS SGS +++V + A+K GA VI +T SP+ A L S E Sbjct: 188 DLVFAISTSGSTRDLVDAVKEAKKNGADVICLTGHLRSPIATYADTVLLVSSREMPTEGG 247 Query: 244 SMSTRTAQNSVTDLL 258 +++T+ Q + ++L Sbjct: 248 ALATKFMQTYMLNIL 262 >UniRef50_A1AYM0 Transcriptional regulator, RpiR family n=3 Tax=Proteobacteria RepID=A1AYM0_PARDP Length = 287 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 75/227 (33%), Positives = 124/227 (54%), Gaps = 7/227 (3%) Query: 38 RQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNATALHLHSSITSDDS 97 RQ+++ G+S + +VK A+KLG GF + R AL+ R+ A+ LHS I+ +DS Sbjct: 45 RQVSEDAGVSDAMVVKIAKKLGFNGFRDFREALV----VYRQTDVAS---LHSEISPEDS 97 Query: 98 LEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKL 157 I RK+ + ALE+T +++D + + ++ A G+GGSA + RD++ K Sbjct: 98 SADIIRKVFQTSIQALEETMSIIDVSAFDRAATLLHGARQRDFYGVGGSAQIARDVAHKF 157 Query: 158 MKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITS 217 ++IG R + D H+ + L DV +A S+SG+ ++ A AR+QGA VIAIT+ Sbjct: 158 LRIGLRAGVQDDPHMMLMSAALLGPEDVVVAFSHSGTTSNVIEAARLARQQGARVIAITN 217 Query: 218 LTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDLLFVGLVQ 264 +PL LA L + + + + + R AQ ++ D +FV + Q Sbjct: 218 YATAPLSELADIALCSTAQGSPLLGENAAARIAQLNIMDAIFVAVAQ 264 >UniRef50_P44540 Uncharacterized HTH-type transcriptional regulator HI0143 n=33 Tax=Gammaproteobacteria RepID=Y143_HAEIN Length = 288 Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 81/261 (31%), Positives = 143/261 (54%), Gaps = 3/261 (1%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L KI + T++E+KIAD + + + S ++AK L + ++++V+F + +G +GF Sbjct: 8 LNKIGSLYQSLTKSEKKIADTILRSPDLVSQCSLSEIAKHLQVGEATLVRFCRTIGFKGF 67 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 +E ++ L E A+++ + + L + SDDSL IA+KL +E+T LLD Sbjct: 68 SEFKLELSIEL-ATKDNQDESILETEI-MPSDDSL-TIAQKLQTAVANVMEETINLLDLK 124 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 +L+++++V+ KA I + G+G S + D KLM+IG++V + H + L Sbjct: 125 QLEEVVKVLKKARRIFLFGVGSSGVTAEDAKNKLMRIGFQVDASGNNHFMYMQAALLTSS 184 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 DV I +S+SG E + A++ GAT +A+T SP+ A + L + + + + Sbjct: 185 DVAIGLSHSGYSAETAHTIKIAKQNGATTVALTHSLRSPVTEYADYVLVNGNKQGKLQGD 244 Query: 244 SMSTRTAQNSVTDLLFVGLVQ 264 S+ T+ AQ V DL++ LVQ Sbjct: 245 SIGTKIAQLFVLDLIYALLVQ 265 >UniRef50_B4EZY5 RpiR-family transcriptional regulator n=54 Tax=Gammaproteobacteria RepID=B4EZY5_PROMH Length = 295 Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 79/253 (31%), Positives = 132/253 (52%), Gaps = 3/253 (1%) Query: 12 SEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALI 71 + T Q+IAD++ + +E+ +S Q+++ ++++V+F + LG +GF + +M L Sbjct: 23 NSLTRVSQRIADYILFHPTEVTQLSIAQLSQATKAGEATVVRFCRTLGYKGFQDFKMDLA 82 Query: 72 GEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEV 131 E + S N + L + ++ D + I KL L +T LLD ++Q + Sbjct: 83 IEMATSD---NDESPILDAEVSHQDDIHTIGLKLQATINNVLSETLNLLDMQQVQGAVNA 139 Query: 132 ISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISY 191 + A ++ I G+G S + DL KLM+IGYRV + H + LK GDV I IS+ Sbjct: 140 LLSANYVFICGVGSSGITAEDLKNKLMRIGYRVDAVTNNHFMYMQASLLKSGDVAIGISH 199 Query: 192 SGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQ 251 SG+ E V + A++ GA+ IA+T S + A L + + + + S+ T+TAQ Sbjct: 200 SGNSLETVHALKLAKEAGASTIALTHNLGSQIMEYADHHLINGNRQGKLQGDSIGTKTAQ 259 Query: 252 NSVTDLLFVGLVQ 264 V DLL+ LVQ Sbjct: 260 LFVLDLLYTLLVQ 272 >UniRef50_D2AR91 Putative transcriptional regulator, RpiR family n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AR91_STRRD Length = 299 Score = 120 bits (300), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 75/239 (31%), Positives = 128/239 (53%), Gaps = 13/239 (5%) Query: 26 QANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNATA 85 ++ ++E +VS G S+++IV+ A+ LG G+++LR AL + +RE+ Sbjct: 43 RSTITEFSAVS--------GTSEATIVRTARALGFAGYSQLRFALAA--AVAREEPERL- 91 Query: 86 LHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPFIQITGLGG 145 + + DD L + K+ R + AL T A L+ RL ++E ++ A + + G+G Sbjct: 92 --VPGDLGPDDPLTDVIAKVTRAESEALADTAAQLNPDRLGAVVEAMTAARRVDVYGVGA 149 Query: 146 SALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAA 205 S LV D++ KLM+IG D H+ T + L +GDV + +S +G +++ A Sbjct: 150 SGLVAADMAQKLMRIGRSSHAFTDAHLALTSAALLGEGDVTVGVSCTGETPDVIAPMRVA 209 Query: 206 RKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDLLFVGLVQ 264 RK GAT +AIT+ S L LA L + ET +R ++++R +Q + D +FVG+ Q Sbjct: 210 RKAGATTVAITNNPRSSLAELAEHVLVSAGRETAFRPGALASRISQLLIVDCIFVGIAQ 268 >UniRef50_UPI000196C77F hypothetical protein CATMIT_02718 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C77F Length = 277 Score = 120 bits (300), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 77/263 (29%), Positives = 140/263 (53%), Gaps = 9/263 (3%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 +T+I A TE E++IA ++ + ++ S+ ++ ++ S +++V+FA+KLG GF Sbjct: 4 ITRIKEAS--LTETEKEIAQYIIEHPEQVLDDSAMKLGEKTHSSSAAVVRFAKKLGYSGF 61 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 +L++ L + S + + LH D+ + + K++ + + +++T LL + Sbjct: 62 PQLKIELAKDLVGSIPEVD-NLLH------PDEDMATLMNKVHHSQIVTIDKTYHLLSAS 114 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L+ +++ + +A + + G+GGSA+V D KLM+IG D H+Q T + + Sbjct: 115 TLEDVVKALEQAKHVYLFGVGGSAIVCDDFIHKLMRIGKYACFYPDVHLQMTSVPNMTEE 174 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 D+ I +SYSG K IV A+ A++ +AIT + L +L L S E R Sbjct: 175 DLAIFVSYSGETKGIVTAAKWAKEMNIPSVAITQSAYNKLGKLVDHVLTIPSQEQSLRIG 234 Query: 244 SMSTRTAQNSVTDLLFVGLVQLN 266 +MS+R + V DLL+ GLV+ N Sbjct: 235 AMSSRYSSLIVVDLLYYGLVKRN 257 >UniRef50_Q184N2 Putative phosphosugar-binding transcriptional regulator n=4 Tax=Clostridium difficile RepID=Q184N2_CLOD6 Length = 283 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 76/238 (31%), Positives = 127/238 (53%), Gaps = 6/238 (2%) Query: 13 EFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIG 72 + TE ++KIAD++ N + +S ++A S +SIV+F++K+G GF +L++ + Sbjct: 13 DLTEVDKKIADYILNNTEAISKLSVSELASNSKTSTASIVRFSRKMGYSGFGDLKIEIAK 72 Query: 73 EYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVI 132 + + + +I S VI + N+ E + QT L + +++ +E I Sbjct: 73 DLMGKENEYTYVDENYDCNIDS-----VINKITNKNIE-TINQTRLLNEKDIIKEAVEQI 126 Query: 133 SKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYS 192 KA + I G+GGSALV DL KL++I + D+H Q VS + K D+ IAISYS Sbjct: 127 IKAKNVYIFGVGGSALVALDLQMKLLRINKQAFTSLDSHTQLMVSSNVDKEDIAIAISYS 186 Query: 193 GSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTA 250 G KE++ E A+ +G VI IT +D+ L +++ L + E R ++S+R A Sbjct: 187 GESKEVIKSIENAKLKGCKVICITKYSDNHLSKISDLKLVVPNIEKRLREGAISSRIA 244 >UniRef50_B5HLI6 RpiR-family transcriptional regulator n=3 Tax=Streptomyces RepID=B5HLI6_9ACTO Length = 317 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 78/260 (30%), Positives = 141/260 (54%), Gaps = 4/260 (1%) Query: 6 KISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTE 65 K+ G T + ++A+ + A+ + +++ +A++ G S++++V+ A+ LG G+ Sbjct: 38 KVRTLGPSMTRSMHRVAEAVAADPAGCAALTVTGLAERTGTSEATVVRTARLLGYPGY-- 95 Query: 66 LRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARL 125 R + + ++ + A + + I DD + + KL +++ L T A LD A+L Sbjct: 96 -RDLRLALAGLAAQQQSGRAPAITTDIAVDDPIADVVAKLAYDEQQTLADTAAGLDTAQL 154 Query: 126 QKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDV 185 + + A I + G+G S LV +DL+ KL++IG +D H+ T + L+ GDV Sbjct: 155 GAAVAATASARRIDVYGVGASGLVAQDLTQKLLRIGLIAQAHSDPHLAVTNAVQLRSGDV 214 Query: 186 QIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSG-ETEWRSSS 244 IAI++SG+ +++ A + GAT +AIT D + + A L T + E+E R ++ Sbjct: 215 AIAITHSGATGDVIEPLRVAFEHGATTVAITGRPDGAVTQYADHVLTTSTARESELRPAA 274 Query: 245 MSTRTAQNSVTDLLFVGLVQ 264 MS+RT+Q V D LFVG+ Q Sbjct: 275 MSSRTSQLLVVDCLFVGVAQ 294 >UniRef50_C6J1X3 RpiR family transcriptional regulator n=2 Tax=Bacillales RepID=C6J1X3_9BACL Length = 289 Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 77/262 (29%), Positives = 133/262 (50%), Gaps = 6/262 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L +S+ + E+K+ +++ + + + ++A GIS S++ +F + +GF Sbjct: 5 LHAVSSHLETLSPQERKLGEYILESPATVIHQGITELANACGISPSTVTRFCKTFHFKGF 64 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 + +M L E A + N H I +D L+ I + ++ T LLD Sbjct: 65 PDFKMKLASEL-AHKPAEN----HYQDIIAGND-LQKIVEAMEANHLASITDTTRLLDMN 118 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 +L + +E + +A I + G+ S++V +D KL++IG AD+H+Q T + +L +G Sbjct: 119 QLSRAVEALCRAKRIDLYGVATSSIVAQDFYQKLVRIGKNCTAFADSHMQITSASSLGEG 178 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 DV +AISYSG E + A+ GAT +++T + + L LA L + S E R Sbjct: 179 DVALAISYSGETPETIDALRCAKDSGATTLSLTQYSSNSLASLADIALFSSSLEEGMRRG 238 Query: 244 SMSTRTAQNSVTDLLFVGLVQL 265 M++R AQ V D+LF G+V L Sbjct: 239 DMASRIAQLHVIDILFTGMVSL 260 >UniRef50_C3RKW6 Sugar isomerase n=3 Tax=Bacteria RepID=C3RKW6_9MOLU Length = 291 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 77/257 (29%), Positives = 139/257 (54%), Gaps = 7/257 (2%) Query: 13 EFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIG 72 +F+ +E+ IA ++ N ++ ++S +++AKQ S ++IV+ +KLG G+ + ++ Sbjct: 12 DFSSSEKTIAKYILDNGEDILNLSVKELAKQTYTSPATIVRLCRKLGLNGYGDFKI---- 67 Query: 73 EYSAS--REKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIE 130 +YSA +K N + ++ + DS IA ++ + A+E T L+D+ L KII Sbjct: 68 KYSAELQFDKKNKKRVDVNFPFGNTDSNSQIAYRIANLHQEAIEDTLNLVDFKNLDKIIN 127 Query: 131 VISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAIS 190 ++ +A I + G G S L G D K+M+IG V A Q +S DV I IS Sbjct: 128 LLDQARRIYLFGNGNSLLAGFDFQHKMMRIGKMVEMRAHAGEQGFLSYTCSPDDVAILIS 187 Query: 191 YSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW-RSSSMSTRT 249 YSG E+V A+ +K ++ ITS+ D+ L + + ++T S E + + + S++T Sbjct: 188 YSGETNEMVELAKFLKKMHVPLLGITSIGDNQLSKYCTYIMNTGSREKIFSKIAPYSSKT 247 Query: 250 AQNSVTDLLFVGLVQLN 266 + + + DL+F + +LN Sbjct: 248 SISYLLDLIFSCIFRLN 264 >UniRef50_A8LV24 Transcriptional regulator, RpiR family n=7 Tax=Actinomycetales RepID=A8LV24_SALAI Length = 320 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 75/277 (27%), Positives = 139/277 (50%), Gaps = 4/277 (1%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L ++ + T +++A+ + ++ + ++A++ G S ++I +F + +G +G+ Sbjct: 34 LARVRAGADDLTGALRRVAEHVLSDPEAAARATIVELAERSGTSPATITRFCRAMGFEGY 93 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 +LR+ + E R + + + I D L + ++ A+ T ALLD A Sbjct: 94 ADLRLGIAAETG--RARLAGWTVDIGREIQPGDPLRRVLDQIIAADTRAMHDTAALLDLA 151 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 +++ I+ A + I G GSALVG ++ F L +IG +D H + L+ G Sbjct: 152 EVERAAVAIAGASRVNIFGASGSALVGEEMQFMLHRIGVAAWAWSDVHEGLASAALLRVG 211 Query: 184 DVQIAISYSGSKKEIV-LCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 DV + +S+SG +E + + AEA +GAT +A+T SPL LA L T S T +R Sbjct: 212 DVALGVSHSGQTRETIEMLAEAG-SRGATTVAVTGFPRSPLAELADIALLTASRATTFRP 270 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSE 279 ++S R Q V DLL++ + Q + ++R+++ Sbjct: 271 DALSARHPQLVVLDLLYIAVAQRTHDRAHAALRRTAQ 307 >UniRef50_A8RWE9 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RWE9_9CLOT Length = 301 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 74/255 (29%), Positives = 138/255 (54%), Gaps = 8/255 (3%) Query: 14 FTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGE 73 ++ E + A+++ A+ +L S +A++ G S++++ + KLG +GF L++ + E Sbjct: 36 LSKKELETAEYMAAHQEQLIYSSITDLAERAGSSEATVTRVCGKLGYRGFQALKVGVARE 95 Query: 74 YSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVIS 133 + +EK +H ++ +D EVI K+ L T ++ + I+ + Sbjct: 96 LTTPQEK-------IHENLEADSPAEVIIEKIFSSAIETLSMTQKSINVKAVAASIDALC 148 Query: 134 KAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSG 193 +A I I G G SA + D K +++ D H+Q ++ DV +AISYSG Sbjct: 149 RARRIIIIGNGNSASIAADAQHKFLRLDLNAHAYTDDHMQMIAVSSMTDQDVLLAISYSG 208 Query: 194 SKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNS 253 S + +V A A++QGATVI++T+ SP+ +LA L+T S ET +R+ ++S+R A+ + Sbjct: 209 SSRNVVEAAHQAKEQGATVISLTNEGSSPVSKLADICLNTYSQETRYRTYAISSRMAELT 268 Query: 254 VTDLLFVGL-VQLND 267 + D ++ G+ ++L D Sbjct: 269 IIDTIYTGVALRLGD 283 >UniRef50_C6XNZ1 Transcriptional regulator, RpiR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNZ1_HIRBI Length = 297 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 72/256 (28%), Positives = 130/256 (50%), Gaps = 8/256 (3%) Query: 21 IADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASREK 80 IAD++ + + + +S ++A+ G S+ S++ ++LG GF +L+++L E + Sbjct: 39 IADYVLGHANAVVGMSVTELAEATGTSEGSVINLCRQLGLSGFQQLKLSLAQEVVRPVQ- 97 Query: 81 TNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPFIQI 140 +H + D + +K+ AL +T ++LD + ++VI A ++I Sbjct: 98 ------FIHEDLQPSDDTSTVCQKMFHAGSEALRETLSILDPDAISMAVDVIRSADRVEI 151 Query: 141 TGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVL 200 G+G SA + D +++++IG D+H+QA + + IS+SGS E + Sbjct: 152 YGIGSSAPIAEDAQYRMLRIGLDAKVVVDSHIQAISASRTGPNVAVLTISHSGSTHETLA 211 Query: 201 CAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDLLFV 260 AR GA I IT+ SPL+ A L T++ ET++RS +M++R AQ + D+L Sbjct: 212 ATRLARDAGAKTIIITNFASSPLQAYADVKLYTMARETKFRSEAMTSRIAQLCILDVLIA 271 Query: 261 GLVQLNDVESLKMIQR 276 L L+D E + R Sbjct: 272 ALA-LDDYERATTVLR 286 >UniRef50_C0R285 Transcriptional regulator n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0R285_BRAHW Length = 285 Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 76/274 (27%), Positives = 151/274 (55%), Gaps = 7/274 (2%) Query: 13 EFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIG 72 +F++ +KI++++ +N E+ +++ ++K G+S +S+V+FA+ LG +G EL++++ Sbjct: 13 DFSKAYKKISNYILSNPKEVIKLTALDISKNCGVSSASVVRFAKDLGFKGLDELKISI-- 70 Query: 73 EYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVI 132 AS+ + ++++ I++DD++E + K+ + + E LD L+K ++I Sbjct: 71 ---ASKNGDDDNKYNINTIISADDNVEELCNKIMLLIKSSNEDFFYQLDKEALEKAFKLI 127 Query: 133 SKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYS 192 A I + G+G S+L DL KL + + D H+ A L + DV IA SYS Sbjct: 128 RNARNIYMLGIGASSLSAYDLFHKLKRANFNAFFYEDAHLNAEFFNYLTEEDVVIAFSYS 187 Query: 193 GSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQN 252 G E++ + A + A++IA+T + L ++A + + E R +++++ + Sbjct: 188 GRTNEVIYPVKIASSKKASIIAVTRKKTNNLSKMADVLITVPNNEELTRMGAITSKYSSL 247 Query: 253 SVTDLLFVGLVQLNDVESLK-MIQRSSELTQRLK 285 V+DLL+ G +Q D E++K + +S LT+ LK Sbjct: 248 IVSDLLYFGAIQ-KDFENIKENLINTSILTRELK 280 >UniRef50_UPI0001788119 transcriptional regulator, RpiR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788119 Length = 278 Score = 117 bits (292), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 76/281 (27%), Positives = 142/281 (50%), Gaps = 7/281 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L ++ +E+K+A F+ +E+ +S +A + G SQ++IV+ + +G +G+ Sbjct: 5 LVRLREVYDSLNPSERKVAAFILQEPAEMIQMSVADLAVRSGSSQAAIVRLCKTMGFKGY 64 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 +L++ + G+ ++ AT + I +DS+ I + ++ ++ T +++ Sbjct: 65 QDLKLKVAGDL----QEPLATG---YQDIRPNDSISAIIQNVSNNNIQSIRDTMKIMEEG 117 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 +++ + + ++ I + G+G S L+G D K ++I D HVQ T + L Sbjct: 118 MVEEAVLALDQSKRIFMFGVGASNLIGMDAQQKFLRINKVCISFPDPHVQLTSAVLLTPD 177 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 D + ISYSG E++ A A+++G I IT DS L R L T S E E RS Sbjct: 178 DAAVCISYSGETDEVIRAAAIAKEKGCKTIGITKYGDSTLSRSVDIPLYTSSTENEIRSG 237 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 +MS+R Q ++ D+L++G+ N S+K + S +RL Sbjct: 238 AMSSRITQLNLIDILYLGVASRNYENSVKYLDESRRAIKRL 278 >UniRef50_C5C2G7 Transcriptional regulator, RpiR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C2G7_BEUC1 Length = 285 Score = 116 bits (291), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 82/249 (32%), Positives = 131/249 (52%), Gaps = 5/249 (2%) Query: 39 QMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNATALHLHSS-ITSDDS 97 ++A Q S+++IV+F + LG G+ +LR+ L E RE L H + I ++D Sbjct: 39 ELASQCETSETTIVRFCRTLGLTGYVQLRLELATEIG--RENAQRGELGDHGADILAEDG 96 Query: 98 LEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKL 157 L +A K+ L +E+T A LD L+++++ I A G+G S DL KL Sbjct: 97 LAAMAAKIAFTDTLGIEETLASLDIEHLERVVDAIDTAGRSVTYGVGSSGSSAADLQRKL 156 Query: 158 MKIGYRVACEADTHVQATVSQALK-KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAIT 216 +IG RVA D A + AL GDV +A S+SG+ +E + A K GA +A+T Sbjct: 157 FRIG-RVAFTFDDPHDAVTAAALSSPGDVAVAFSHSGATREALAFLATAGKHGARTVAVT 215 Query: 217 SLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQR 276 + +S L R A L T ET++RS +M++R AQ + D +FVG+ Q +++ ++ Sbjct: 216 NSAESALARAADIVLVTSVRETQFRSGAMASRIAQLMIVDCIFVGVAQRRYDQTVDALKS 275 Query: 277 SSELTQRLK 285 + Q L+ Sbjct: 276 TYAAAQELR 284 >UniRef50_D1AK74 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AK74_SEBTE Length = 284 Score = 116 bits (290), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 73/284 (25%), Positives = 150/284 (52%), Gaps = 9/284 (3%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 ++ K+ + ++ T++E+KIA+F+ N + ++++S ++K++ + Q+++++F++KLG Sbjct: 9 MFQVKLKSVYNDLTKSEKKIANFIMKNFEKTKTMTSYDISKKVNVGQATVIRFSKKLGYS 68 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 F EL ++ K + + L +I+ D + K+ + ++ T L Sbjct: 69 SFNELINSI--------NKLDQEDI-LEKNISLGDDIATTNTKIANQYIDVIKLTLELNP 119 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 +++IE I A I + G+G SA+V D KL ++G DTH+Q ++ L Sbjct: 120 VYVFEEVIEAIIAAERIVVLGIGNSAIVSTDFVNKLARVGMNAFTNLDTHLQFSMISNLG 179 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 K D+ I IS SG +EI+ A+ A++ +I+IT T + L + F L T S + R Sbjct: 180 KNDLLILISDSGETREIIEAAKLAKQNKTRIISITKFTKNKLHAYSDFILKTASFDINLR 239 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + ++R Q ++ D++F+ +++ + + ++I S + LK Sbjct: 240 LDATTSRITQFTIIDMIFINILKTDFSKYKEIITNSDNAVKLLK 283 >UniRef50_UPI00016945F6 hypothetical protein Plarl_13824 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016945F6 Length = 248 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 68/226 (30%), Positives = 130/226 (57%), Gaps = 3/226 (1%) Query: 46 ISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKL 105 +S+++IV+ ++ L +G+ EL++ + + + S N+ + I D S + + + Sbjct: 9 VSEATIVRLSRSLNLKGYQELKLRIAADLAQS---LNSNLAESYQEIHMDASSQSLVESI 65 Query: 106 NREKELALEQTCALLDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVA 165 + +++ T ++L+ L + IEV+ A I + G+G SA++ +D KL +I Sbjct: 66 SHNNMRSIQDTMSVLNIKELDRAIEVLGGARKITLFGIGASAVIAQDFKQKLTRINRWCE 125 Query: 166 CEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRR 225 D QAT++ L++ D + ISYSG+ ++I+L +AA+++GAT+I++T +P+ Sbjct: 126 AAYDFDSQATLAANLQEKDAVLGISYSGNTQDILLAMQAAKERGATLISLTKFGHNPVAE 185 Query: 226 LAHFTLDTVSGETEWRSSSMSTRTAQNSVTDLLFVGLVQLNDVESL 271 AH L T S E RS +M++R AQ +V D+L+VG+ + N E++ Sbjct: 186 QAHIRLFTSSLEKSIRSGAMASRIAQLNVIDILYVGIARQNYEENI 231 >UniRef50_C9L6X6 Transcriptional regulator, RpiR family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L6X6_RUMHA Length = 297 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 81/248 (32%), Positives = 132/248 (53%), Gaps = 7/248 (2%) Query: 11 GSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMAL 70 G + E+KIA +L N + + ++A ++G+S +SIV+F + +G GF E ++ Sbjct: 29 GEHTKKTERKIAAYLLGNFDKSLHSTLLELADEIGVSDASIVRFCKSIGYTGFQEYKI-- 86 Query: 71 IGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIE 130 +A+ + L+ + S++ DD+ I K+ + ALEQT LD + + K+ + Sbjct: 87 ----NAALQSVPEPRLY-NPSLSVDDNPAEICDKIFAIESSALEQTKQELDISVMNKVAD 141 Query: 131 VISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAIS 190 V+ KA I + G GGSA+ RD KL+KIG R + D +Q + L + DV AIS Sbjct: 142 VLLKARRINLVGTGGSAISARDFQHKLLKIGVRAELQEDKDLQLMSASLLTEEDVLFAIS 201 Query: 191 YSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTA 250 +SGS + E A+K+ A +I +T + + L A + L VS +T + S S S R A Sbjct: 202 HSGSNLHVAETIELAQKRNAKIITLTMKSKNILVEKADYPLYVVSEKTIFESESFSARLA 261 Query: 251 QNSVTDLL 258 Q ++ D L Sbjct: 262 QLAMLDCL 269 >UniRef50_Q9K6Z8 Transcriptional regulator (Hex regulon repressor) n=2 Tax=Bacillus RepID=Q9K6Z8_BACHD Length = 284 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 74/263 (28%), Positives = 141/263 (53%), Gaps = 5/263 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + L KI + F E K+A+++ + + +++++Q+A+Q SQSSIV+F ++LG + Sbjct: 5 MLLAKIEQELASFPAAETKVANYVLKHPELVPTMTTKQLAEQANASQSSIVRFCKRLGLE 64 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 F +L++AL E + N+ +L + +DDS ++ +K++ ++AL+ ++ Sbjct: 65 SFPKLKLALAKELTRKEAYINSASL-----LETDDSPPILFQKVSSLNQMALDMATKAMN 119 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + +E + KA I G+GGS D +K M++G+ D H + Sbjct: 120 EQAFTEAVEQMVKAKKIAFFGVGGSFTSCIDGQYKFMRLGFHSLASGDYHQMIPFITMMD 179 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 + DV I +S SG+ KE++ A+ A+++ +I IT+ + S L R A +L E + R Sbjct: 180 EQDVVICMSTSGNTKEVLDIADYAKERNVKLIGITASSRSALTRKAAVSLLIPDIEVQQR 239 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQ 264 S+++RT+Q +V D L+V + Sbjct: 240 IGSIASRTSQLNVIDALYVSVFH 262 >UniRef50_B9K581 Transcriptional repressor of rpiB expression; transcriptional repressor of ribose catabolism (RpiR/YebK family) n=3 Tax=Proteobacteria RepID=B9K581_AGRVS Length = 291 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 81/254 (31%), Positives = 138/254 (54%), Gaps = 13/254 (5%) Query: 14 FTENEQKIAD--FLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALI 71 T E K+ D F + SE S+ +Q+A+ G+S++ +VK +KLG GF + R + + Sbjct: 22 LTPLEAKVVDTVFGMRDFSEETSL--KQIAENAGVSEAMVVKITKKLGFSGFRDFRSS-V 78 Query: 72 GEYSASREKTNATALHLHSSITSDD-SLEVIARKLNREKELALEQTCALLDYARLQKIIE 130 +Y+ R+ T +H ++ DD SLE++ +K+ R ALE+T A+LD A + + Sbjct: 79 SQYN--RQPTT----EMHQELSVDDTSLEIV-QKVFRTSIHALEETLAILDMAAFDQAAD 131 Query: 131 VISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAIS 190 +I KA G+GGSA + RD++ K ++IG R + D+H+ + L DV I S Sbjct: 132 MIHKARNRDFYGVGGSAQIARDVAHKFLRIGVRASVFDDSHMMLMSAALLADTDVAIGFS 191 Query: 191 YSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTA 250 +SG+ ++ + ARK GA+ IA+T+ S L + A L + + + + + R A Sbjct: 192 HSGNTIAVIEALQLARKNGASTIAVTNYGSSALAQSADVVLCSTAQGSPLMGENAAARIA 251 Query: 251 QNSVTDLLFVGLVQ 264 Q ++ D +FV + Q Sbjct: 252 QLNILDAIFVAVAQ 265 >UniRef50_A8S9N1 Putative uncharacterized protein n=3 Tax=Bacteria RepID=A8S9N1_9FIRM Length = 321 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 79/280 (28%), Positives = 141/280 (50%), Gaps = 16/280 (5%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L ++ + E++IA F+ N E +++ R +A++ S SS+V+ + +G QG+ Sbjct: 38 LLRLREVQPSLSSTERQIAQFILENPDETTTLTIRDLARRSFSSPSSVVRICRVIGFQGY 97 Query: 64 TELRMAL------IGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTC 117 ELR AL +GE + REK IT DSL+ I K+ + +L T Sbjct: 98 KELRHALTLELATLGENGSHREK----------DITPQDSLQEIVDKVTHKNIQSLLDTQ 147 Query: 118 ALLDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVS 177 LL L++ +E+I+ A + + G+G S V +D K +++ D+H Q + Sbjct: 148 RLLLLDELEQCVELIANARTVLLFGIGSSLCVAKDTYLKFLRLDKPCVVNEDSHSQLLQA 207 Query: 178 QALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGE 237 + DV I SYSG E++ C + + GA VIA+T S + +LA L + E Sbjct: 208 RNATAQDVGIVFSYSGQTMEMIQCIKEMKAGGAPVIAVTRYYPSEVAQLADHVLYVAANE 267 Query: 238 TEWRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRS 277 + +R+ +MS+R +Q +V D+L+ N ++++ + ++ Sbjct: 268 SLFRNGAMSSRLSQLNVVDILYTAYASRNHEDTMRRLTKT 307 >UniRef50_A4EAC5 Putative uncharacterized protein n=2 Tax=Collinsella RepID=A4EAC5_9ACTN Length = 283 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 5/247 (2%) Query: 18 EQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSAS 77 E+ + ++ A+ E+ +S R +A S SSI++F ++LG G+ E + LI E + Sbjct: 20 ERNVIAYVSAHPHEVVGLSVRGLADVTFSSPSSILRFCKRLGFAGYKEFQRELIAELALL 79 Query: 78 REKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPF 137 +K + AL I+ DDS+E I K+ + +E T LDY L++ + +A Sbjct: 80 GDKKD-VAL---EDISMDDSVERIVGKVMKSNVRTIEATARTLDYTVLERCAARLKRARA 135 Query: 138 IQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKE 197 + + G+G S LV DL+ KLM++ D H Q ++ + +GD+ IA SYSG +E Sbjct: 136 VNLFGIGASRLVAHDLAQKLMRVDKECRLYDDWHDQLLCAKNMHEGDMAIAFSYSGLTQE 195 Query: 198 IVLCAEAARKQGATVIAITSLT-DSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTD 256 ++ C A++ V+A+T + S L +A L + E RS +M++R AQ V D Sbjct: 196 VLDCTAEAQRHNCPVVAVTKVDGSSKLATMADAVLGVAASEPLVRSGAMASRMAQLMVVD 255 Query: 257 LLFVGLV 263 L+ V Sbjct: 256 ALYAAYV 262 >UniRef50_B4SHK0 Transcriptional regulator, RpiR family n=3 Tax=Stenotrophomonas RepID=B4SHK0_STRM5 Length = 282 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 81/266 (30%), Positives = 133/266 (50%), Gaps = 4/266 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L KI + + + E++IADF+ N L+ SS+Q+A LGISQSS+VKF+QKLG Sbjct: 1 MPPLLKIRSERGQMSAIERRIADFILDNAHLLRDYSSQQLASALGISQSSVVKFSQKLGF 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +G+ +L+ + IG+ A + A S S D + L R K A E+T Sbjct: 61 KGYPDLKYS-IGQDVA---RAGADPQQAPSEPDSGDDYLRLGEALRRSKAQAEEETRQAN 116 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 +++I++++ AP + + GLG L R+ + +L +G V D + A Sbjct: 117 PREEIERIVQLLDGAPKLFVYGLGDDGLYAREFAMRLSLLGLLVVPHTDPILMLANLSAA 176 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + GDV + S G+ ++ + + G VI+IT T +PLR A L + + Sbjct: 177 RPGDVLLMFSEFGNLPQLSQLSRQFQDMGGKVISITRHTANPLRAHADAALAVCAHDRTP 236 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLN 266 + + + R+A +++ D LFV L N Sbjct: 237 QVAQLLYRSAMHALLDFLFVLLCHAN 262 >UniRef50_D1ALE3 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ALE3_SEBTE Length = 282 Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 70/271 (25%), Positives = 146/271 (53%), Gaps = 7/271 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 KI++ FT +E K+ ++++ N + ++ R+++ + +++I++F +K G +G+ Sbjct: 9 FNKINSLKKSFTASETKVFNYIEKNPESVVRMNIRELSNAIDTGETTIIRFCKKTGFKGY 68 Query: 64 TELRMALIGEYSASREK-TNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 + +++LI S S+EK +N + I +D++ IA + L+ T +L++ Sbjct: 69 NDFKISLIS--SLSKEKQSNKYKI----DILADENYNSIAEGIYNNSFNVLKDTLSLINN 122 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 L K I +I+ A I+ G+G S L +D +K ++IG VA +D H+ + + Sbjct: 123 EILDKCINLINNAKHIEFIGIGHSNLTAQDAKYKFLRIGKSVASHSDPHLFKMAASISDR 182 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 DV I IS +G +E++ ++A+ +GA IAIT+ + + + A + L E + Sbjct: 183 EDVIIGISQTGETREVIDSLQSAKVRGAKTIAITNNDKTEITKYADYVLLNGFNEELLET 242 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKM 273 S S R +Q + +LL++G++ N +++++ Sbjct: 243 GSFSERISQLFIIELLYLGVLSKNKDKAMEL 273 >UniRef50_C2JLW7 Bifunctional RpiR family transcriptional regulator/sugar isomerase n=22 Tax=Enterococcus faecalis RepID=C2JLW7_ENTFA Length = 290 Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 79/274 (28%), Positives = 147/274 (53%), Gaps = 8/274 (2%) Query: 13 EFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIG 72 + ++E+KIA+++ N + S++++++AKQ G S ++I++F + GFTEL++ L Sbjct: 23 QLPKSERKIAEYILKNTETVISMNAQELAKQAGSSPAAIIRFCHSMDVNGFTELKLLLSA 82 Query: 73 EYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVI 132 +++ +++ +T +S I +KL +E++ L+ + + ++++ Sbjct: 83 NLGQMKQQ-------MYTEVTKGESTADIKQKLQARFVHVVERSGQTLEDVAVNEAVDLL 135 Query: 133 SKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYS 192 K I + GLG S+LV +D+ K ++G V D H+ A++ + +K V I IS S Sbjct: 136 EKTEVIFVYGLGASSLVAQDIYQKFTRLGRTVFTTLDHHLFASMLGSTEKPSVFIVISNS 195 Query: 193 GSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGE-TEWRSSSMSTRTAQ 251 G+ KE A+ A++QG +++IT S + + L T SGE RS++ + AQ Sbjct: 196 GTNKEASTLADLAKQQGIPIVSITQDEKSVIGEKSDIVLQTSSGEDVPLRSAATVSLVAQ 255 Query: 252 NSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 V D+LF N E+L+ IQ S + +RLK Sbjct: 256 LYVVDVLFFAYAAKNYKETLEKIQISRKNVERLK 289 >UniRef50_B2TJ91 Transcriptional regulator, RpiR family n=1 Tax=Clostridium botulinum B str. Eklund 17B RepID=B2TJ91_CLOBB Length = 285 Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 73/259 (28%), Positives = 124/259 (47%), Gaps = 7/259 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L +I+N SE E+K+A ++ N + S ++A+ S++++ + KLG +G+ Sbjct: 10 LERITNIYSELKGAEKKVAQYVLENPKNIIHFSITELAEVSKASEATVFRLCSKLGYKGY 69 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 +L++ L G + +++ + +D +I RK+ ++E T + Sbjct: 70 QDLKINLAGSVIEPID-------NIYEEVKENDDTYIIMRKIMSSNINSIESTLKINKTE 122 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L K I +I A I G+GGS + D K ++ G D+H Q S G Sbjct: 123 DLDKAIAIILNAKKIMFFGMGGSWTIANDAYHKFIRTGIDCVASCDSHWQVMFSSMANSG 182 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 D IA S SGS KE+V A+K+G +IAIT SPL +++ L E+ +RS Sbjct: 183 DAIIAFSNSGSNKELVENINLAKKRGIKIIAITGNEKSPLAKISDLHLIAYGNESMFRSE 242 Query: 244 SMSTRTAQNSVTDLLFVGL 262 +M +R + D L+VG+ Sbjct: 243 AMESRLTSLMIVDWLYVGV 261 >UniRef50_Q03YQ8 Transcriptional regulator n=4 Tax=Leuconostocaceae RepID=Q03YQ8_LEUMM Length = 284 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 75/247 (30%), Positives = 128/247 (51%), Gaps = 5/247 (2%) Query: 13 EFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIG 72 ++ EQK+ DF+ +VSE + + ++M++ G+S ++I +F +K+G + F E ++L Sbjct: 15 QYNTTEQKLIDFIINHVSEAREANIQEMSELSGVSTATISRFVKKIGLESFREFSVSL-- 72 Query: 73 EYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVI 132 AS A ++ L I D +A+K+ E AL T + L +L + + Sbjct: 73 ---ASAATQMAASVDLFGEIADTDDTIAVAQKVFGGAENALAATVSNLTATQLDEATLAL 129 Query: 133 SKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYS 192 A + G+GGS++V + K ++ V D VQ + L D + IS+S Sbjct: 130 ISARRVGFFGIGGSSIVAFNAYHKFLRTPIDVIAHPDYDVQLMQAVKLNSNDTAVVISHS 189 Query: 193 GSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQN 252 G K+ +L A+ +Q +IA+TS DSPL +LA L +++ E +RS SMS+ AQ Sbjct: 190 GRNKDTLLIAKKLHEQHVKIIAVTSFKDSPLAKLADLVLLSLAEEVNFRSESMSSLIAQL 249 Query: 253 SVTDLLF 259 ++ D LF Sbjct: 250 TIIDTLF 256 >UniRef50_B9CM70 Transcriptional regulator, RpiR family n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CM70_9ACTN Length = 283 Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 84/264 (31%), Positives = 137/264 (51%), Gaps = 24/264 (9%) Query: 12 SEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALI 71 S ++ E+++A+FL A+ + ++ Q+A+ LG++ S++ KF QKLG +GF + R Sbjct: 15 SSLSDKERQLAEFLLADPHKASKMTISQIAQTLGMADSTVFKFTQKLGFEGFRDFR---- 70 Query: 72 GEYSASREKTNATALHLHSSITSDDSLEVIA--------RKLNREKELALEQTCALLDYA 123 GE +A + +H IT + + +A R L KEL EQ D Sbjct: 71 GELAAEGFDPEVS---IHEHITHKSTPKQMAETVFESSIRSLTDTKELFSEQ-----DII 122 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 K+IE + F G+GGS++V D K ++ RVA +AD H+Q + Sbjct: 123 HAAKLIEDCYQLTFY---GMGGSSVVAADAYHKFLRTPKRVAYDADFHLQLMRASRSNGD 179 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 D + +S+SG + + AE R+ GA+ I ITS SPL LA L T++ ET +RS Sbjct: 180 DCALLVSHSGRCIQTIQIAEKLREVGASTIVITSNPSSPLTALADACLVTIAEETAYRSE 239 Query: 244 SMSTRTAQNSVTDLLFVGLVQLND 267 S+++R +Q ++ D L+ +V +D Sbjct: 240 SLASRISQLALVDALYT-IVMFSD 262 >UniRef50_Q2G836 Transcriptional regulator, RpiR family n=4 Tax=Proteobacteria RepID=Q2G836_NOVAD Length = 296 Score = 113 bits (282), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 71/249 (28%), Positives = 129/249 (51%), Gaps = 9/249 (3%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 LT+I +A + ++ KIA ++ + +++ +S +A + S+ S++ F + +G GF Sbjct: 21 LTRIRSALPQMSKTAAKIAAYVVEHPADVVGMSITDLAALVDASEGSVINFCRSIGLGGF 80 Query: 64 TELRMALIGEYSASREKTNATALH-LHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 L+++L E +H +H + +DS E + RK+ AL + ++LD Sbjct: 81 QHLKLSLAQEI--------VQPVHFIHEDLEREDSTETVCRKVFHSGIQALRDSLSVLDP 132 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 + +++I A ++I G+G SA + D ++L++IG D+HVQA + K Sbjct: 133 KAMAAAVDIIRAARRVEIYGIGSSAPIAEDAHYRLLRIGLDARVVIDSHVQAISASRCDK 192 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 + IS+SGS E V A + GA I IT+ SP++ A L T++ ET +R+ Sbjct: 193 DVAVLTISHSGSTNETVAATRLAHEAGARTIVITNFGRSPIQAYADVVLFTMARETRFRT 252 Query: 243 SSMSTRTAQ 251 +M++R AQ Sbjct: 253 EAMTSRIAQ 261 >UniRef50_Q38YX9 Gluconate operon transcriptional regulator, RpiR family n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38YX9_LACSS Length = 280 Score = 113 bits (282), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 74/254 (29%), Positives = 133/254 (52%), Gaps = 9/254 (3%) Query: 14 FTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGE 73 F+E ++IAD++ Q ++ ++ A G+S ++I +FA+ LG F +MAL+ Sbjct: 16 FSEKYKQIADYIFQESQFNQRLTIQEFAANCGVSTATISRFAKILGFDNFQAFKMALL-- 73 Query: 74 YSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVIS 133 ++E + H I ++D+ +A K+ AL+ T +LL +LQK + +I+ Sbjct: 74 ---AKEANTSPLFH---EINANDTFTTMAEKIFSSNSNALKATWSLLTEEQLQKAVALIN 127 Query: 134 KAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSG 193 +A + + GLG S +V +D K ++ D H+Q + L D I IS+SG Sbjct: 128 RAHLLSLFGLGASGIVAQDGYHKFLRTSIPTVFNQDYHLQLMQATKLTNQDCAIIISHSG 187 Query: 194 SKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNS 253 K+ + A +++ +I ITS +S L +L TL ++S ET +R+ ++ AQ S Sbjct: 188 QNKDALELARILKERQVPLIVITSFGNSSLAKLGDITLLSISEETNYRAEALHALIAQIS 247 Query: 254 VTDLLFVGLVQLND 267 + D LF+ +V +N+ Sbjct: 248 LIDSLFM-MVAVNN 260 >UniRef50_UPI0001693BD8 YbbH n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001693BD8 Length = 265 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 74/265 (27%), Positives = 134/265 (50%), Gaps = 6/265 (2%) Query: 21 IADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASREK 80 +A ++ + E+ S+ ++A++ S ++I +F + L QGFT+ ++ L GE + + Sbjct: 2 LASYIVEHAHEVVSMGITELAERSQTSPATISRFCKSLHFQGFTDFKLKLSGELAKQPSE 61 Query: 81 TNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPFIQI 140 H + I + + L I + ++ T L D +LQ+ + + A I + Sbjct: 62 ------HSYQDIVAGNPLSEIVSAIEANHLRSIADTTQLNDIKQLQQAVSALKNARQIDL 115 Query: 141 TGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVL 200 G+ S +V +D KL++IG R + +D H+Q T + L + DV AISYSG +E + Sbjct: 116 YGVATSGIVAQDFYQKLVRIGKRTSVFSDPHMQITSASNLGENDVVFAISYSGDTEETIQ 175 Query: 201 CAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDLLFV 260 A+++GA I++T +PL L+ L + E R M++R AQ V D+LF Sbjct: 176 ALRCAKERGAVTISLTKFGTNPLANLSDIRLFASTLEEGMRRGDMASRIAQLHVIDILFT 235 Query: 261 GLVQLNDVESLKMIQRSSELTQRLK 285 LV E + ++RS +L ++ + Sbjct: 236 SLVSEEFDELIPRLERSYQLVRKYR 260 >UniRef50_B1YJ20 Transcriptional regulator, RpiR family n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YJ20_EXIS2 Length = 284 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 80/282 (28%), Positives = 148/282 (52%), Gaps = 8/282 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 ++IS E + +K+ADF+ A+++E+ ++ +A++ G S +++V+F + LG +G+ Sbjct: 6 FSQISAVHEELPSSSRKVADFVLAHMNEIAGMTIHHLAEESGTSAAAVVRFCRALGLKGY 65 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 ELRM + SA +T+ H I ++ + K AL+ T L Sbjct: 66 PELRMRI----SADTARTDLKGYH---DIEKNERPADLVEKTVSNSIQALQDTAKQLSED 118 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 R+ + +V+ +A I G+G S +V D + K ++G E+D H+ AT+ + Sbjct: 119 RIAEAADVLDQARAIYFYGIGASNVVALDAAQKWTRVGKLTIQESDQHLVATILANASQD 178 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTV-SGETEWRS 242 DV AISYSG +E+V A+ +G VI++T D+ + +LA L T + E RS Sbjct: 179 DVFFAISYSGETEEVVELIRLAKIRGLKVISLTRFGDNRVSQLADIALWTSRAPEAPLRS 238 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 +++S+R AQ D+LF+ ++ ++++ +Q + E + L Sbjct: 239 AALSSRLAQLFAIDVLFLSYAAVHYDDTIERLQYTRESVKML 280 >UniRef50_C2D8M2 Possible transcriptional regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D8M2_9ACTN Length = 291 Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 69/246 (28%), Positives = 126/246 (51%), Gaps = 6/246 (2%) Query: 18 EQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSAS 77 E+ +A ++ E +S + +A + +S +++V+ + +G +GF E + L E + Sbjct: 19 EKAVARYVLQCPHESNRLSVKALAARSFVSPAAVVRMCKSIGFEGFKEFKTELTRELA-- 76 Query: 78 REKTNATALHLHS-SITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAP 136 T L L + I +D+LE I +K+ + +L L+D ++K +E++ Sbjct: 77 ---TEKLILPLDTKDIKQNDTLESIIKKITLKNIHSLYDALRLIDPETIEKAVELLQACD 133 Query: 137 FIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKK 196 I + GLG S + +D + K +++ D H+Q ++ DV I ISYSG Sbjct: 134 RILLFGLGASLIAAKDANLKFLRVNKTCLINDDWHLQLITARNSTSQDVGIVISYSGQTA 193 Query: 197 EIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTD 256 E + CAE + +IAIT +SP+ +LA L T S E+ +RS++MS+R +Q ++ D Sbjct: 194 ETLTCAEILKHNNTPIIAITRCIESPISKLADVLLYTTSNESLFRSAAMSSRISQLNIID 253 Query: 257 LLFVGL 262 +L+ Sbjct: 254 ILYTAF 259 >UniRef50_C9Q9L7 Helix-turn-helix protein RpiR n=6 Tax=Vibrio RepID=C9Q9L7_9VIBR Length = 281 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 71/253 (28%), Positives = 134/253 (52%), Gaps = 3/253 (1%) Query: 15 TENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEY 74 +NEQK++ + +L +S+ ++ LGIS SS++++A+ LG GF +L++ L + Sbjct: 16 NQNEQKLSQLIVERQFDLSELSATKVGALLGISDSSVIRYAKSLGCSGFPDLKLKLAAQ- 74 Query: 75 SASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISK 134 + + TA +++SI + DS I K +EQ+ L+D +++ + + K Sbjct: 75 --APQVMARTAQSVYASIETGDSTAQIIEKAKHLFVSTIEQSIGLMDAESVEQCAQQLLK 132 Query: 135 APFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGS 194 A I + G+G SA+V D++ KL++ G+ V D H+Q + LK DV + +S G+ Sbjct: 133 ANKIALAGIGASAIVAADINHKLIRAGFNVQFNQDYHIQIVQASLLKADDVLLVVSARGN 192 Query: 195 KKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSV 254 +E++ E A++ GA VIA+T + +LA + + E + ++ + Q + Sbjct: 193 TQEVLTAIERAQQNGAQVIALTRYGRDKVAQLADYVIPYSYTEEHSQLGMVTPQLLQMAA 252 Query: 255 TDLLFVGLVQLND 267 D++F L+ L D Sbjct: 253 FDIVFFKLITLTD 265 >UniRef50_C6D7K6 Transcriptional regulator, RpiR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7K6_PAESJ Length = 284 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 71/249 (28%), Positives = 127/249 (51%), Gaps = 5/249 (2%) Query: 12 SEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALI 71 + FT E+K AD++ + + +S +A+ G+ ++SI +F + LG +G+ + ++AL Sbjct: 15 NRFTATEKKTADYILEHADAVVYMSITDLAEGCGVGEASIFRFCKALGFKGYQQFKIALA 74 Query: 72 GEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEV 131 SA E L + D+LE K + AL +T L+ + + I++ Sbjct: 75 HSISADNEIP-----QLSGQVKIQDTLEDAVSKTLQSNINALNETFKLIQLDSINRAIDL 129 Query: 132 ISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISY 191 + ++ G+G S + + + K M+I + C D+H QA + + + DV I ISY Sbjct: 130 LIRSDRFIFYGVGSSLMTAMEANNKFMRITNKTGCSVDSHQQAMSAALMGERDVAIIISY 189 Query: 192 SGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQ 251 SGS K+ + A+ A+++GA +I IT SPL + TL + E + S+S + AQ Sbjct: 190 SGSTKDSIEVAKKAKERGAAIIVITRFVKSPLTSYSDITLLCGANEGPLQGGSLSAKIAQ 249 Query: 252 NSVTDLLFV 260 + D+L+V Sbjct: 250 LYLLDVLYV 258 >UniRef50_B5I8T9 Sugar isomerase n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I8T9_9ACTO Length = 312 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 69/247 (27%), Positives = 134/247 (54%), Gaps = 1/247 (0%) Query: 19 QKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASR 78 +K+ + + + + + S+ ++ ++ G SQ+++ +F + +G + + L + L E Sbjct: 40 RKVGELILEDPAAVTHCSAAELGRRTGTSQATVTRFCRAIGLESYQHLLIELAQERGRG- 98 Query: 79 EKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPFI 138 E ++ + + I+ DDSLE + + + A++QT +D L++ + ++KA I Sbjct: 99 EVSDWGSAEIGPDISPDDSLERVVQVVGSADLRAIQQTIERIDLDALERAAQALAKARRI 158 Query: 139 QITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEI 198 + G+GGS V ++ +L +IG +V + H AT + L DV I IS+SG+ +E Sbjct: 159 DVYGVGGSGAVAQETETRLFRIGCQVRGWTEVHGAATSAALLTPADVAIGISHSGATRET 218 Query: 199 VLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDLL 258 + E A+++GAT IAIT+ SPL + A L + + ET +R+ S+ R + + D L Sbjct: 219 LEPFEMAKERGATTIAITTDPRSPLAKAADIRLISATSETSFRTGSIGGRHSVLMIVDCL 278 Query: 259 FVGLVQL 265 +V + Q+ Sbjct: 279 YVRVGQV 285 >UniRef50_UPI000169311A hypothetical protein Plarl_08670 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI000169311A Length = 267 Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 73/231 (31%), Positives = 127/231 (54%), Gaps = 19/231 (8%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L I + S F+E E+KIADFL ++ + +++A Q G+S +SI +F++K+ Q F Sbjct: 9 LKTIQSKYSSFSEKEKKIADFLLSSPAAAAQCHIKEIADQTGVSVASITRFSKKVLCQSF 68 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 EL++ L +RE + T D L+V + N+ KE+ +L++ Sbjct: 69 VELKLKL------ARESYDHTK----------DELDVELK--NQYKEM-FNDIESLIENE 109 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L++++ +I KA + I GLG S L ++ +++L ++G+ D H+ S L+K Sbjct: 110 PLKEVLSLIKKAKRLFIYGLGSSGLAAQEFNYRLSRMGFYSEAVTDPHLMIIRSVLLEKD 169 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTV 234 DV IA S SG K+++ EAA+ + A +IA T+ D+PL ++AH + T+ Sbjct: 170 DVVIAFSRSGQTKDLLKSLEAAKGKKAKLIAFTAFGDTPLTKMAHKVIWTI 220 >UniRef50_B7RYI4 Transcriptional regulator, RpiR family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RYI4_9GAMM Length = 278 Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 78/262 (29%), Positives = 127/262 (48%), Gaps = 8/262 (3%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M LT +++ S+ +++ KIA + AN + + ++ +A Q G+S+ ++ +F LG Sbjct: 1 MTLLTDLADPLSKRSKSAHKIAACVVANPEAILASTTASLAAQAGVSEPTVNRFCTGLGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF + +++L E + + + + I DDS +A K+ + +L T L Sbjct: 61 KGFPDFKLSLAAELARKQPR-------MTRDIDPDDSAAKVAAKIFESTQASLSNTQDHL 113 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D A LQ ++ +S A I + GLG SA V D KL++ + D Q V+ L Sbjct: 114 DLAALQDVVAAMSNARSIALCGLGASASVALDAQHKLLRFPIPIMAHTDIINQRVVAAGL 173 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 D+ I ISY+G ++ AE A +G V ITS SPL L SGE Sbjct: 174 GADDLLICISYTGRTTAMIELAELAVSRGCQVAGITS-PHSPLANTCPLVLGVESGEDTD 232 Query: 241 RSSSMSTRTAQNSVTDLLFVGL 262 R + M++R AQ + D+L L Sbjct: 233 RYTPMTSRIAQLVIIDILATCL 254 >UniRef50_C4FUK3 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FUK3_9FIRM Length = 280 Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 79/262 (30%), Positives = 133/262 (50%), Gaps = 7/262 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 +TKI +A T EQ I ++ + E+ +++ ++ G S ++ +FA+K+G +G Sbjct: 4 ITKIKSALESMTATEQMIGRYILEHRHEVLEMNTLELGWASGTSGAAWTRFAKKMGYKGL 63 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 L++ L ++++T+ + + D+L + K E L +T L+D A Sbjct: 64 PALKLDL------AQDRTDEEMPEVDLFLDPRDTLGALLHKTQTILEQNLRRTYELIDEA 117 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L + I++++ A + + G+GGS +V DL KL +I V + DTHV G Sbjct: 118 VLAQAIDMMASAHRLFLCGIGGSGIVCMDLVHKLTRINRPVTYDRDTHVLMAQMAHCMPG 177 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLT-DSPLRRLAHFTLDTVSGETEWRS 242 DV + +SYSG+ + A A++QGA +IAIT +PL LA L E E R Sbjct: 178 DVVLVVSYSGNTHTVNQMAYLAKEQGAKIIAITGHNLKAPLASLADVCLFIPRDEKEIRL 237 Query: 243 SSMSTRTAQNSVTDLLFVGLVQ 264 S+++R VTDLL+ G+ Q Sbjct: 238 GSVTSRDGSLIVTDLLYYGVAQ 259 >UniRef50_A7G380 Transcriptional regulator, RpiR family n=1 Tax=Clostridium botulinum A str. Hall RepID=A7G380_CLOBH Length = 179 Score = 110 bits (275), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 64/173 (36%), Positives = 101/173 (58%) Query: 113 LEQTCALLDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHV 172 + T L+D +L + ++ I A I + G+G SA+V D +KL++I +V + D+H+ Sbjct: 5 INDTKELVDDEKLLEAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMFQQDSHL 64 Query: 173 QATVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLD 232 Q VS + DV +AISYSG+ +E+ L E A+K GAT IAIT S L +A L+ Sbjct: 65 QLAVSVHITNRDVAVAISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIADINLN 124 Query: 233 TVSGETEWRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S E + R ++S+RT+Q VTD LF+G+ + N ++ K + + L + LK Sbjct: 125 IPSIEKDLRIGAISSRTSQLFVTDSLFLGIAKENLDKTEKNLINTRNLVEVLK 177 >UniRef50_Q03CI3 Transcriptional regulator n=10 Tax=Lactobacillaceae RepID=Q03CI3_LACC3 Length = 280 Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 78/258 (30%), Positives = 130/258 (50%), Gaps = 7/258 (2%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 +L ++ + E+K+A +LQA+ + ++++ G+S ++I +FA+ LG Sbjct: 4 FLVQLQIYKPNLSGQEKKLAAYLQAHPDHASQANISELSQLTGVSTATISRFAKALGYTN 63 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 F LRMAL S E +A L + ++ DS++ +A+K+ AL T A LD Sbjct: 64 FQALRMALA---QTSPEDDHA----LFAELSPKDSVDTLAQKIFTSNIDALRTTLANLDT 116 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 L K ++ I+ A + + GLG S LV D K ++ VA AD H+Q + L Sbjct: 117 DALTKAVKWITHAEHLGLFGLGASNLVALDGYHKFLRTAIPVAYAADYHMQLMAATHLGP 176 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 D I S+SG K+ + AE A+KQ +I IT S L ++A V+ E+ +R+ Sbjct: 177 RDAMILTSHSGEDKDAIALAELAKKQQVPLIVITGSPTSRLVKMADAAFVAVAEESRYRT 236 Query: 243 SSMSTRTAQNSVTDLLFV 260 ++ A+ S+ D LF+ Sbjct: 237 EALHALIAEISIMDTLFM 254 >UniRef50_C3JIB3 RpiR-family transcriptional regulator n=2 Tax=Rhodococcus erythropolis RepID=C3JIB3_RHOER Length = 291 Score = 110 bits (274), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 79/276 (28%), Positives = 144/276 (52%), Gaps = 5/276 (1%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L +I + S + E +IA+ ++A+ S +++ +A++ S +++V+ A++LG +G+ Sbjct: 14 LARIRASLSSLSPAELRIAEIIEADPSLASTLTVNDLAERASTSTATVVRTAKRLGFEGY 73 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 +LR+AL + E T + + + +D + EV+A+ E E L+ T L D A Sbjct: 74 PQLRLALAAISGSGTENTIPLGVDI---VAADSAGEVMAKLAEFESE-QLKGTAQLTDPA 129 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L++++ I A +++ G+G S +V +DL+ KL +I D + L Sbjct: 130 ALEEVVSRIRSARRVEVYGIGASGIVAQDLTLKLSRIDVNCRVHLDRDAAMVSASLLGPD 189 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 D+ + IS+SG ++V AR+ GA+ AIT S L +H L T E +RS+ Sbjct: 190 DIAVGISHSGETSDVVEPLALARRTGASTAAITGGARSTLAVQSHHVLLTAGREFGFRSA 249 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSE 279 +M++RT Q V D +F +V + +L +QRS + Sbjct: 250 AMASRTGQLLVVDTIF-AMVAHSLPSALSALQRSHD 284 >UniRef50_B5GNW3 RpiR-family transcriptional regulator n=14 Tax=Streptomyces RepID=B5GNW3_STRCL Length = 354 Score = 110 bits (274), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 82/252 (32%), Positives = 140/252 (55%), Gaps = 4/252 (1%) Query: 14 FTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGE 73 T + Q++A+ + + + +++ +A++ G S++++V+ A+ LG G+ R + Sbjct: 79 MTRSMQRVAEAVADDPAGCAALTVTGLAERTGTSEATVVRTARLLGYPGY---RDLRLAL 135 Query: 74 YSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVIS 133 + + + + + + I+ DD L + KL R+++ L T A LD A L + + Sbjct: 136 AGLAAHQQSGRSPSVTADISVDDPLPDVVAKLARDEQQTLADTAATLDTAALAAAVSAAA 195 Query: 134 KAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSG 193 A I I G+G S+LVG DL+ KL++IG D H+ T + L+ GDV +AI++SG Sbjct: 196 TARRIDIYGVGASSLVGLDLAQKLLRIGLIAHAHTDPHLAVTNAVQLRTGDVAVAITHSG 255 Query: 194 SKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDT-VSGETEWRSSSMSTRTAQN 252 S +++ AA ++GAT IAIT D P+ + A L T S E+E R ++MS+RT Q Sbjct: 256 STGDVIEPLRAAFERGATTIAITGRADGPVTQYADHVLTTSTSRESELRPAAMSSRTGQL 315 Query: 253 SVTDLLFVGLVQ 264 V D LF+G+ Q Sbjct: 316 LVVDCLFIGVAQ 327 >UniRef50_A5EB66 Transcriptional regulator, RpiR family n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EB66_BRASB Length = 270 Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 76/258 (29%), Positives = 126/258 (48%), Gaps = 8/258 (3%) Query: 12 SEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALI 71 E ++IA+ + A S ++A+ +S+ +IV F +++G +GF EL++ L Sbjct: 3 PELPPKARQIAELIAAQPEPFVHKSITEVAEACDVSEGTIVSFCRRVGVRGFQELKIML- 61 Query: 72 GEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEV 131 +R+ L + + D + + +L++T LL L + + Sbjct: 62 -----ARDLIEPVRL-IQEDLHRGDDPATVTDHIFAAHAASLQETRRLLSMEALAEATRL 115 Query: 132 ISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISY 191 + +A I+I G+G SA + +DLS++L+++G D+HVQA + G + +S+ Sbjct: 116 LREAQRIEIYGIGSSAPIAQDLSYRLLQLGLAANAIVDSHVQAVSAGMTGPGVATVTVSH 175 Query: 192 SGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQ 251 SGS E VL A+ GA I IT L SPL L TV+ ET +R +MS+R AQ Sbjct: 176 SGSTVETVLATRLAQAAGARTIGITRLGKSPLAAHCEVLLYTVANETRYRPEAMSSRVAQ 235 Query: 252 NSVTDLLFVGLVQLNDVE 269 ++ D L V L D E Sbjct: 236 LAIIDTL-VSCCALTDTE 252 >UniRef50_Q2JBJ8 Transcriptional regulator, RpiR family n=1 Tax=Frankia sp. CcI3 RepID=Q2JBJ8_FRASC Length = 299 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 79/249 (31%), Positives = 126/249 (50%), Gaps = 7/249 (2%) Query: 14 FTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGE 73 T + +KI + + E+ ++ +A + G S +++V+F Q LG +GF +L++ L GE Sbjct: 34 LTPSGRKIGQLILDDPREIVHLTVTDLADRTGTSVATVVRFCQDLGLKGFADLKIRLAGE 93 Query: 74 YSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVIS 133 LH ++T DS I K+ E AL +T +D A + ++ + Sbjct: 94 AIPPERG-------LHEAVTHADSPATILEKILHSTESALSETTRTVDRAAFTRAVDALQ 146 Query: 134 KAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSG 193 A + + G G SA + +D +++ +G AD HVQ ++ L +AIS++G Sbjct: 147 CADRVLLIGAGTSAPLAQDAAYRFRTLGLLAEAPADAHVQHVAARLLPPASACLAISHTG 206 Query: 194 SKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNS 253 +E + A AAR GAT IA+TS SPL RLA L S ET +R +MS+R + Sbjct: 207 QTRETLAGAAAARAAGATTIALTSFFRSPLTRLADVALVAGSSETNYRVEAMSSRIIHAT 266 Query: 254 VTDLLFVGL 262 V D LFV + Sbjct: 267 VLDALFVAV 275 >UniRef50_A9KIQ0 Transcriptional regulator, RpiR family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIQ0_CLOPH Length = 284 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 70/257 (27%), Positives = 132/257 (51%), Gaps = 4/257 (1%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 +I ++ S+FT++E+ +ADF+ N ++ S +A+ G+ +++ +F + L G+ Sbjct: 6 FARIESSYSKFTKSEKIVADFVFENPEKVLYTSITDLAEICGVGDTTVFRFCKALKLNGY 65 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 E +M L + A R ++ T ++ S++ DD ++ I +K AL +T L++ Sbjct: 66 QEFKMFLAQDI-AVRTGSDYT---INGSVSQDDDIQTICKKALAVDIAALTETFEGLNFE 121 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 + K++++IS A +Q G+G S ++ + K M+I V AD H+Q + L Sbjct: 122 AVTKVVDMISNANKVQFFGMGSSGVIALEAKMKFMRILPNVEHIADCHMQFMSAALLSSR 181 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 D+ I SYSGS K+ + A A+ G V++IT +S L ++ + S E Sbjct: 182 DLAIIFSYSGSTKDSIEIANLAKSNGCKVVSITRYVNSHLANISDVVIPCGSNEGPLDGG 241 Query: 244 SMSTRTAQNSVTDLLFV 260 + ST Q + D+L++ Sbjct: 242 ASSTSMVQFYILDILYL 258 >UniRef50_B0NYS8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0NYS8_9CLOT Length = 282 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 74/248 (29%), Positives = 126/248 (50%), Gaps = 13/248 (5%) Query: 18 EQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSAS 77 E+K+AD+L ++ SE +S ++A SQ++I++F +K+G +GF +L++ L GE Sbjct: 22 EKKVADYLISHPSEAIEMSVSELASHCDASQATIIRFCKKIGCKGFHQLKIKLAGEQRQQ 81 Query: 78 REKTNATALHLHSSITSDDSLEVIARKLNR---EKELALEQTCALLDYARLQKIIEVISK 134 E+ I+++ ++ + + LN K ++ T + L++I+++I Sbjct: 82 EEQV----------ISNEIDIDQMDKSLNNIMISKVEEIKATFHNFNPEELREIVDLIIH 131 Query: 135 APFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGS 194 A I+ +G + + D S+K ++G + Q S+ L+KGDV AIS SG+ Sbjct: 132 ANLIEFAAMGDTIPIALDGSYKFNQLGLKAVSSTIWESQEAFSRTLRKGDVFFAISASGA 191 Query: 195 KKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSV 254 K +V E + G T IAIT+ + SPL L L T + E + TR A SV Sbjct: 192 SKRLVKMVEIVKDNGVTTIAITNQSKSPLAELCDHVLLTATREHIFHDQVSFTRMAAMSV 251 Query: 255 TDLLFVGL 262 D LF+ L Sbjct: 252 IDTLFLLL 259 >UniRef50_C5BVH6 Transcriptional regulator, RpiR family n=2 Tax=Actinomycetales RepID=C5BVH6_BEUC1 Length = 299 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 80/276 (28%), Positives = 138/276 (50%), Gaps = 2/276 (0%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 LT++ +E++IA+ + + + + Q+A + G S++S+ +F + +G G+ Sbjct: 17 LTRLPGLLPTLRSSERRIAEAILDDPQAVSRDTIEQLAARCGTSKTSVTRFCRTIGLAGY 76 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 TELR+AL G+ R + + L SS + +V+ +L AL +T LD A Sbjct: 77 TELRLALAGDVG--RRRDESWRAELGSSADPQNPADVVVDELLTANVRALTETVRTLDRA 134 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L ++ ++ A I + G+GGS V DL + +IG +++H T + L Sbjct: 135 ALAASVDALASAGRIDLYGIGGSGTVAADLQRRFHRIGRVAHAWSESHDALTGAAMLGAS 194 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 DV IA+S++G E+ AR +GAT IA+T+ S + A L T + E R+ Sbjct: 195 DVAIALSHTGETSEVAAALALARDRGATTIAVTNYPGSAVAAAADLVLVTAAHEERARAD 254 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSE 279 ++ R AQ V D L+V + + ES ++R+SE Sbjct: 255 GLAGRHAQMFVVDCLYVLVAGVLHDESQSGLRRTSE 290 >UniRef50_C6J4B4 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J4B4_9BACL Length = 288 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 73/262 (27%), Positives = 127/262 (48%), Gaps = 10/262 (3%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L KI + T E+ +A+++ AN ++ +S + +AK S +S+++F + +G G+ Sbjct: 9 LIKIRDMKENLTPVERMVAEYILANTEDIPHLSIKSLAKLSKTSDASVLRFCKTMGYSGY 68 Query: 64 TELRMAL---IGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +++ +G R+ ++ I D L+ I ++R ++E T ++L Sbjct: 69 RSFIVSISAALGSMDDERKDQ-------YTDIQPGDDLDTIIANISRNNMKSIEDTLSVL 121 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D + + ++ + + I G+G S LV +D K +I D H Q T + L Sbjct: 122 DRGEVARAVKALRASNRIVFFGIGASGLVCQDGEQKFSRINKMCHSYTDGHSQLTAATLL 181 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 KGDV I +S SG+ EI+ E A+K AT +AIT S L A L + E Sbjct: 182 GKGDVAIFVSNSGNTLEIIETLEIAKKNNATTVAITKYNKSELADKADILLGISTPEITM 241 Query: 241 RSSSMSTRTAQNSVTDLLFVGL 262 RS +M +R A ++ D+LF G+ Sbjct: 242 RSGAMGSRIAMLTIIDMLFAGV 263 >UniRef50_C7T7Y4 Transcriptional regulator n=8 Tax=Lactobacillus RepID=C7T7Y4_LACRG Length = 315 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 77/283 (27%), Positives = 134/283 (47%), Gaps = 8/283 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L K+ + + + +AD++ + + ++ Q+A+ G+S +S+++F + Sbjct: 5 LAKVQAQLPQLSPVNRALADYVLTDAEAFIAQTTAQIARASGVSAASVIRFVRLFDYPDL 64 Query: 64 TELRMALIGEYSASREKTNATAL-HLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 ++AL+ + T A AL L + DD L + RKL++ A+ LD Sbjct: 65 QSFKLALVRD-------TQAPALTPLDPLVQDDDDLPTMMRKLSQTAIAAVRDLPDELDQ 117 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 A +Q I + A I + G+ SALV +DL KL++ GY +AD H Sbjct: 118 AAVQTAITTLRHARHIYLVGMSASALVAQDLYLKLIRAGYLAIFDADAHTALERVYYTTA 177 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 D + SYSG KE+VL A+ AR+ VI +T SPLR A + E R Sbjct: 178 ADAVVVFSYSGLTKEVVLAAQQARRNQTPVIVVTRAEPSPLRDAASCVIALPPTEPLLRI 237 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 ++++ + V ++LF+G+V ++ + + +S+LT LK Sbjct: 238 GAVTSMFTETYVANILFLGVVHGEIKQTEQNYRATSQLTGELK 280 >UniRef50_Q04DU1 Transcriptional regulator n=2 Tax=Oenococcus oeni RepID=Q04DU1_OENOB Length = 282 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 66/242 (27%), Positives = 127/242 (52%), Gaps = 7/242 (2%) Query: 18 EQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSAS 77 E++IAD++ ++ + + + ++ ++GIS +SI +F + LG F + +AL SAS Sbjct: 19 EKRIADYILSHQDSVMDATIQSLSDKIGISTASISRFTRHLGYPNFRDFLIAL----SAS 74 Query: 78 REKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPF 137 ++ +++ + I D E I +KL AL T A ++ L ++++ + + Sbjct: 75 KKNSSSD---FFTEIKQSDQSEQIVKKLFSAGIAALTATAANINMKDLDRVVDWLVSSNK 131 Query: 138 IQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKE 197 I G+GGS++V + K ++ + D +Q + L D+ I IS+SG ++ Sbjct: 132 IGFFGIGGSSIVAFNAYHKFLRTNLNIVSHPDYDIQIMQAAHLTSEDLGIVISHSGRNQD 191 Query: 198 IVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDL 257 +L R+ G+ ++AIT+ +SP+ + A L++ S E +R SMS+ AQ ++ D Sbjct: 192 TLLVENKLRENGSKIVAITAFPESPIAKNADIVLNSYSEEVNFRQESMSSLVAQITIIDT 251 Query: 258 LF 259 LF Sbjct: 252 LF 253 >UniRef50_C8NHI8 Probable transcriptional regulator YbbH n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHI8_9LACT Length = 281 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 76/265 (28%), Positives = 136/265 (51%), Gaps = 6/265 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L KI ++ S FTE ++ IA+F+ N + +++++ S ++ V+F++K+G Sbjct: 1 MSVLYKIKSSMSAFTETDRSIAEFVFVNRQVVLESNAKELGDMTKTSAAAWVRFSKKMGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +G ++AL E ++ TN + + + DSL + +K + +T +LL Sbjct: 61 KGLPAFKVALAKE---TQSYTNED--DIETFLNPQDSLMGLLQKTENMLTQNIRETFSLL 115 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 DY L+K IE I +A + + G+GGS++V D K+ +I V + D H L Sbjct: 116 DYHALEKAIEFIHEAKTVFLLGVGGSSIVCLDFYHKMTRIHQNVMYDRDLHTLMPRIAQL 175 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLT-DSPLRRLAHFTLDTVSGETE 239 K DV + ISY+G + + A+ A+ GA ++ +T S L L+ L E E Sbjct: 176 DKNDVVLVISYNGETESVNSIAKVAKTMGARIVGVTKYNLKSTLSTLSDIRLFVPVEEKE 235 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQ 264 R S+++R + ++TDLL+ G+ + Sbjct: 236 IRLGSITSRNSLLTITDLLYYGIAK 260 >UniRef50_A9M040 RpiR/YebK/YfhH family transcriptional regulator n=24 Tax=Neisseria RepID=A9M040_NEIM0 Length = 282 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 77/271 (28%), Positives = 135/271 (49%), Gaps = 8/271 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L+KIS + + + E+K+A+ A + ++A++ +SQ ++++F + LG +G Sbjct: 2 LSKISESLANLSGAERKVAECALAEPKWFVHAAVAEIAERASVSQPTVIRFCRSLGYKGL 61 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 E ++AL SAS ++H + +DD + + K+ +L L + Sbjct: 62 PEFKLAL----SASIGHEGMP--YVHEELNADDDMASVVEKVLGNAAASLLGERRFLKES 115 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L+ I + A ++ G+G S +V +D K + G DTH Q + L Sbjct: 116 ELENAIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYVDTHTQLMAASVLSDQ 175 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 DV +AIS +GS E++ A++ GA+VIA+T DSPL +LA L + E + Sbjct: 176 DVLVAISNTGSSIELLDAVSIAKENGASVIALTR-NDSPLAQLADCVLSVATQENAELYT 234 Query: 244 SMSTRTAQNSVTDLLFVGL-VQLNDVESLKM 273 M +R Q +V D+L +GL ++L D SL++ Sbjct: 235 PMVSRLLQLAVIDILAIGLALRLGDAASLQL 265 >UniRef50_C3RHA3 Transcriptional regulator n=3 Tax=Bacteria RepID=C3RHA3_9MOLU Length = 288 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 67/246 (27%), Positives = 126/246 (51%), Gaps = 5/246 (2%) Query: 18 EQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSAS 77 E+K+AD++ +L+ +S +AK++ +SQ ++++F + +G F + ++ L Y Sbjct: 20 EKKVADYILNYCGKLEDLSMTLLAKEVAVSQPTVMRFVKAIGYDSFKQFKLELAKNY--- 76 Query: 78 REKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPF 137 +K N + SI +DD + + K+ LE L QK + +I+++ Sbjct: 77 -DKENNIDILYGFSINTDDKIMDLPGKIVATATSMLENALKSLSLVNYQKTVALINQSQH 135 Query: 138 IQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKE 197 I I + S V DL KL+ +G V C +D ++Q+ + L + + I ISYSG+ K Sbjct: 136 ISIYAVENSMGVAHDLMTKLIYLGKSVTCHSDYYLQSIDASNLTRDSLAIGISYSGNSKN 195 Query: 198 IVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDL 257 V + A+ GA IAI + ++ L R L T S + ++ +RTAQ ++ D+ Sbjct: 196 TVEVLKIAKDAGAQTIAIVNFENTMLTRYGDIVLST-SNDQFLYGDAIFSRTAQIALVDM 254 Query: 258 LFVGLV 263 +++G++ Sbjct: 255 IYMGVI 260 >UniRef50_B6G0W9 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G0W9_9CLOT Length = 310 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 68/262 (25%), Positives = 137/262 (52%), Gaps = 6/262 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L +I+ +++E+K+ADF++ + + ++ +++AK+ G+S+ SI++F++ +G GF Sbjct: 32 LFRIATKYMALSKSEKKVADFIKNFNGKAEKLTMKKVAKEAGVSEPSIMRFSKSIGLDGF 91 Query: 64 TELRMALIGEYSASREKTNATALHLHS-SITSDDSLEVIARKLNREKELALEQTCALLDY 122 EL+ L+ +++ T LH I +D++++I K+ E + + Sbjct: 92 NELKYCLM----KTKKDDEGTMKPLHGFDINREDTIDMIPGKIVMTVENQINSMLESISL 147 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 +I I A + I + S DL+ KL+ +G V D+++Q + L Sbjct: 148 KSYSDMINCIINAKNVDIYSVENSVSSANDLATKLLYLGINVKMYTDSYLQKISAYNLTS 207 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 DV I ISYSG+ K+ V + A+K+GAT + IT+ DS + + A + T S + + Sbjct: 208 EDVAIGISYSGNSKDTVEMIKTAKKRGATTVVITNYKDSKIVKYADILICTSSDQMLY-G 266 Query: 243 SSMSTRTAQNSVTDLLFVGLVQ 264 ++ +R Q + D++++G++ Sbjct: 267 DAIFSRAIQLVINDMIYMGIIH 288 >UniRef50_B6GA31 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GA31_9ACTN Length = 281 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 78/250 (31%), Positives = 129/250 (51%), Gaps = 5/250 (2%) Query: 18 EQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSAS 77 E+++ + + + + +S ++A +S S+I + +KLG +G+ E + LI + + Sbjct: 19 ERELIERILDDPESISGLSIHELAAYAFVSPSTITRLCKKLGLKGYKEFQHLLIYDLALL 78 Query: 78 REKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPF 137 RE +++ L + TS ++E K+ R+ +L L D + ++++S A Sbjct: 79 RESSSSKIEDLAPTDTSRQTIE----KVTRDNIDSLRLVEKLNDPETYEACVDLMSDART 134 Query: 138 IQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKE 197 I + G+G S L RD+ +KL++IG D H Q + D+ IAISYSG +E Sbjct: 135 INLFGMGASLLSARDMHYKLLRIGVSCNLIDDWHGQLLCASNSGPEDLSIAISYSGLTEE 194 Query: 198 IVLCAEAARKQGATVIAIT-SLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTD 256 + +C AR++G VIAIT S DS L R A L S E RS++M++R Q V D Sbjct: 195 VNVCVGRARERGGKVIAITGSAFDSKLARQADEVLLVGSTEPLMRSAAMASRIGQLGVID 254 Query: 257 LLFVGLVQLN 266 +LF V N Sbjct: 255 ILFKSFVNRN 264 >UniRef50_Q6AH41 Transcriptional regulator, RpiR family n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6AH41_LEIXX Length = 289 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 82/262 (31%), Positives = 136/262 (51%), Gaps = 3/262 (1%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L+ + A + E +IA + + + ++ ++A SQ+SI +F Q L G+ Sbjct: 5 LSAVRQAVPRLSATEARIAQTVIEHPQRVVDLTIAELAAVCDASQASIARFCQALRYSGY 64 Query: 64 TELRMALIGEYSASREKTNATALHL-HSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 E R+A+ + SRE+ L S I DSL+ + K+ ++ LA+E+T LD Sbjct: 65 REFRLAVAA--ATSREQATRERFELTESEIDPSDSLQEVVAKIAYQETLAIERTARELDA 122 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 L ++ I A + + G+G S L +DL KL +IG C D+H+ + + K Sbjct: 123 EALDAVVAAIIAASRVDLYGIGSSILTAQDLQQKLSRIGLTAFCSVDSHLALSSAALQKP 182 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 G+V IA S+SG +E AR GAT +AIT++ +S + ++ L T + E +RS Sbjct: 183 GNVAIAFSHSGETRETNHALAVARAAGATTVAITNVPESSIAAVSDLLLMTQARENFYRS 242 Query: 243 SSMSTRTAQNSVTDLLFVGLVQ 264 +M++RTAQ ++ D LFV + Q Sbjct: 243 GAMASRTAQLALVDFLFVRVAQ 264 >UniRef50_A9BH25 Transcriptional regulator, RpiR family n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BH25_PETMO Length = 283 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 69/234 (29%), Positives = 125/234 (53%), Gaps = 10/234 (4%) Query: 14 FTENEQKIADF-LQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRM--AL 70 FT++E+K+A++ L + ++ ++ ++A + G S+++I +F +K G + F + ++ AL Sbjct: 15 FTKSEKKVAEYILNSKKEDITRITITELATKCGTSEATIARFVKKAGFETFQDFKLTLAL 74 Query: 71 IGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIE 130 E+ + T I +DS + I RK+ ++E T ++LD + Sbjct: 75 DNNEDIFEEEKDIT-------IFKNDSPQEILRKVKLGSLKSIESTTSILDINNFLQAAN 127 Query: 131 VISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAIS 190 I A I+I G+G S+ V + L +KL ++G+ D H+QA + L GD+ I IS Sbjct: 128 FIRSAKRIEIYGVGSSSAVAKILQYKLTRLGFPSYALEDPHMQAISAATLNFGDLAIGIS 187 Query: 191 YSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSS 244 SGS K+ V A+K GAT I++T +SP+ + + L+ SGE ++S+ Sbjct: 188 QSGSTKDTVDSLNVAKKHGATTISLTEHANSPITKYSDVVLEIFSGENPVKTSA 241 >UniRef50_Q4LA29 Similar to transcriptional regulator n=1 Tax=Staphylococcus haemolyticus JCSC1435 RepID=Q4LA29_STAHJ Length = 283 Score = 107 bits (266), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 73/256 (28%), Positives = 136/256 (53%), Gaps = 5/256 (1%) Query: 7 ISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTEL 66 I ++ S+ +E+++A+++ + E+ + S +++A +S +++V+ ++KL +GF +L Sbjct: 8 IESSLSDLNPSERRVAEYILEHPDEIINYSVQKLADLTNVSVATVVRLSKKLKCKGFQDL 67 Query: 67 RMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQ 126 ++ + + + E N ++ I D S+E + + + L T +L ++ Sbjct: 68 KLKIAYDLN---EPGNIQ--RGYAEIDKDYSIEEVTQTVFHNNTKTLRDTERILSTENIK 122 Query: 127 KIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQ 186 E+I + I G+G SAL+ +D KL +I Y + Q T+S L DV Sbjct: 123 HAFELIVNSRKTCIYGIGASALIAQDFKQKLTRIDYWCDVGSSFDEQVTLSANLSSEDVV 182 Query: 187 IAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMS 246 IAIS SG K+IV + A+++GA VI+IT D+P+ L+ L S E RS +MS Sbjct: 183 IAISSSGQTKDIVNSTQLAKEKGAKVISITKYGDNPISNLSDVQLFVSSSEKAKRSGAMS 242 Query: 247 TRTAQNSVTDLLFVGL 262 +R A S+ D+L++ + Sbjct: 243 SRIAMLSIIDILYICI 258 >UniRef50_B9Y4T6 Putative uncharacterized protein n=2 Tax=Holdemania filiformis DSM 12042 RepID=B9Y4T6_9FIRM Length = 277 Score = 106 bits (265), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 78/279 (27%), Positives = 137/279 (49%), Gaps = 9/279 (3%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 +Y K+ +E T+ E+ IADF Q + E +S +S Q+A +L I QS+I++F++KLG + Sbjct: 1 MYQEKLKQVQNELTQTEKIIADFFQNHSLEARSFTSYQLADRLNIGQSTIIRFSKKLGYR 60 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 F EL L T+ T + I ++ +K+ ++ + + T Sbjct: 61 SFRELLEDL---------STSLTEEKVKEEIVVNEGTSSTNQKIIQQYQKMAQLTLEFNP 111 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + + + + KA I + G G S L +S + +K+G C A++H+ ++ Sbjct: 112 PQVIDQTVSALKKARKIIVFGFGNSNLFAEYISNQWLKMGLDSFCSANSHIIFSMLSQFG 171 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV IS SG EI+ A A Q TVIA+T + + L + L TV+ ET R Sbjct: 172 PQDVLFLISESGETPEILKAARIAGHQNVTVIAMTRIQKNRLHGYSDIVLKTVNYETNTR 231 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSEL 280 ++M+ R +Q + D++++ L + + K+I S +L Sbjct: 232 LNAMTLRCSQLCLLDMIYLNLYKTDFEHYEKIIAESEKL 270 >UniRef50_C0D4M2 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D4M2_9CLOT Length = 282 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/250 (25%), Positives = 130/250 (52%), Gaps = 6/250 (2%) Query: 14 FTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGE 73 + +++ +AD++ N ++ + ++A +S++++++F KL + R+ L E Sbjct: 16 LSSSQKDVADYILTNPDKVMMNTLNEIAAACRVSETTVLRFLHKLNYNSYQLFRINLTQE 75 Query: 74 YSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVIS 133 S ++T ++ + D+ + I K+ ++ + ++D A ++ ++E I+ Sbjct: 76 LSKDNQET------VYDDVGFQDTEDEIIDKIIHSTVSSITDSRQIIDPASVKAVVEKIA 129 Query: 134 KAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSG 193 A I + G+G S + +DL KL+K+G C D H+ ++ L + + I S+SG Sbjct: 130 GARRIVVAGVGASGFIAQDLYHKLIKLGLNAVCANDPHIMNILATGLDQNTILILFSHSG 189 Query: 194 SKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNS 253 +E++ A A+++ V A+TS S L A + L + S ET +RS +M++R Q Sbjct: 190 ESREVLDMAAIAKERRCQVCAVTSYAKSTLANQAGYLLCSSSRETMFRSDAMTSRIVQMV 249 Query: 254 VTDLLFVGLV 263 + D+L+V LV Sbjct: 250 IIDILYVSLV 259 >UniRef50_C0X6G8 RpiR family transcriptional regulator n=23 Tax=Enterococcus RepID=C0X6G8_ENTFA Length = 283 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 73/274 (26%), Positives = 143/274 (52%), Gaps = 6/274 (2%) Query: 13 EFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIG 72 +F++ ++IAD++ + + L S+++ ++A S +S+ +F+++LG + EL++++ Sbjct: 13 DFSKVNKRIADYILKDPTRLLSLTANEIASNSETSPASVTRFSKQLGFDSWEELKLSIAA 72 Query: 73 EYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVI 132 +AS K + + + +DDS++ I K+ +E +D L++ I + Sbjct: 73 VQAASNGKKDIDPI-----VAADDSVDTICMKVESLLNATIEDLFYTVDKQALERAIAHV 127 Query: 133 SKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYS 192 KA I + G+G S+L +L K + G + D+H+ D+ I +SYS Sbjct: 128 KKAEKIHLVGIGASSLTTYNLYHKFNRAGRQAIFNYDSHMMLEFLNYATAQDILITVSYS 187 Query: 193 GSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQN 252 G KE ++ E A+ +GATVI ITS +R L+ L + E R ++S+ + Sbjct: 188 GLTKEALIACEIAKNRGATVIFITSNDGENVRSLSDEVLLVPNNEHLIRVGAISSIASSM 247 Query: 253 SVTDLLFVGLVQLN-DVESLKMIQRSSELTQRLK 285 ++ D+L++G +Q + D E + + +S+L RLK Sbjct: 248 AIGDVLYLGSIQDDLDTEIERNMIETSQLVSRLK 281 >UniRef50_Q45581 Uncharacterized HTH-type transcriptional regulator ybbH n=7 Tax=Bacillaceae RepID=YBBH_BACSU Length = 283 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 70/260 (26%), Positives = 133/260 (51%), Gaps = 8/260 (3%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L I + + +E+K+AD++ A+ + + +++ S +++++ + LG +GF Sbjct: 6 LAIIQSMKHKLPPSERKLADYILAHPHKAIESTVNEISALANSSDAAVIRLCKSLGLKGF 65 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 +L+M + G+ + + I + L I+ K A++ T L+DY Sbjct: 66 QDLKMRVAGDLAKP-------TFQGYRDIVPHEPLPSISEKTAGNAIQAIQDTSDLMDYK 118 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L++ + ++ KA + GLG S +V +D K ++I + DTH+ A++ K Sbjct: 119 ELERAVSLLLKAHTVHFIGLGASGIVAKDAQQKWLRIHKQATAFTDTHLVASLIANADKD 178 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTV-SGETEWRS 242 D+ AIS+SG +EIV A+++G T I++T + + + LA L T S E RS Sbjct: 179 DIVFAISFSGETQEIVELFAMAKEKGITTISLTQFSQTSVSALADVPLYTAHSNEALIRS 238 Query: 243 SSMSTRTAQNSVTDLLFVGL 262 ++ S+R AQ + D+LF+G+ Sbjct: 239 AATSSRLAQLFIIDVLFLGM 258 >UniRef50_Q2J8J9 Transcriptional regulator, RpiR family n=1 Tax=Frankia sp. CcI3 RepID=Q2J8J9_FRASC Length = 293 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/256 (29%), Positives = 124/256 (48%), Gaps = 7/256 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L +I + + EQ++A + A+ + S ++A+ G S +++V+F Q LG +G+ Sbjct: 19 LERIRALSASLSSAEQRVARQVLADPVAMIHQSVSELAQVSGSSPATVVRFCQSLGLRGY 78 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 EL++ALI E T L +++ D + IA K+ AL + +D Sbjct: 79 QELKLALIRE-------TLPVERQLVDEVSAADGPDEIAGKVLGGAASALTEAARGIDGG 131 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L I +++ AP +G SA + D +++L +G D HVQ ++ L G Sbjct: 132 VLAAIADLVVAAPRTLFVAVGTSAPLAMDAAYRLTTVGVDARFAGDAHVQHVTARMLAAG 191 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 D+ +A+S++GS E + AA GA AITS SPL L + S ET +R Sbjct: 192 DLCVAVSHTGSTAETLAAMRAAVDAGAHTAAITSFARSPLTELVRHAVVVGSRETAYRIE 251 Query: 244 SMSTRTAQNSVTDLLF 259 +M++R SV D LF Sbjct: 252 AMTSRIVHLSVLDALF 267 >UniRef50_D0W145 Transcriptional regulator HexR n=3 Tax=Neisseriaceae RepID=D0W145_NEICI Length = 315 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 75/271 (27%), Positives = 135/271 (49%), Gaps = 8/271 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L+KIS + ++ + E+K+A+ A + ++A+ +SQ ++++F + LG +G Sbjct: 2 LSKISESLADLSGAERKVAECALAKPKWFVHAAVAEIAEHSSVSQPTVIRFCRSLGYKGL 61 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 E ++AL SAS ++H + +DD + + K+ +L L + Sbjct: 62 PEFKLAL----SASIGHEGMP--YVHEELNADDDMSSVVEKVLGNAAASLLGERRFLKES 115 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L+ I + A ++ G+G S +V +D K + G DTH Q + L Sbjct: 116 ELENAIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYVDTHTQLMAASVLSSE 175 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 DV IAIS +GS E++ A++ GA++IA+T +SPL ++A L + E + Sbjct: 176 DVLIAISNTGSSIELLDAVSIAKENGASIIALTR-NESPLAQMADCVLSIATQENAELYT 234 Query: 244 SMSTRTAQNSVTDLLFVGL-VQLNDVESLKM 273 M +R Q +V D+L +GL ++L D SL++ Sbjct: 235 PMVSRLLQLAVIDILAIGLALRLGDAASLQL 265 >UniRef50_A4TMJ1 RpiR-family transcriptional regulatory protein n=22 Tax=Gammaproteobacteria RepID=A4TMJ1_YERPP Length = 292 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 73/263 (27%), Positives = 131/263 (49%), Gaps = 5/263 (1%) Query: 12 SEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALI 71 + T + Q+IA ++ A +++ +S ++ +++I++F + LG +GF + +M L Sbjct: 22 NSLTRSAQRIAAYILAQPAQVTQLSIADLSALTQAGEATIIRFCRTLGYKGFQDFKMDLA 81 Query: 72 GEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEV 131 E + N+ L + + D I KL L +T LL ++++++V Sbjct: 82 IEVATRHNSENSL---LDADVQEGDDTLAIGSKLQSAINNVLSETLNLLSIESVEQVVKV 138 Query: 132 ISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISY 191 + A I I G+G S + D KLM+IG RV + H + + GDV I IS+ Sbjct: 139 LRPADRICIFGVGSSGITAEDAKGKLMRIGLRVDAATNNHFMYMQASLMNPGDVAIGISH 198 Query: 192 SGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQ 251 SG+ E V + A++ GAT +A+T S + LA + L + + + + S+ T+ AQ Sbjct: 199 SGTSAETVQALKLAKEAGATTVALTHNMGSRITELADYVLINGNRQGQLQGDSIGTKIAQ 258 Query: 252 NSVTDLLFVGLVQLND--VESLK 272 V DL++ LV+ + ES+K Sbjct: 259 LFVLDLIYALLVKADPAQAESIK 281 >UniRef50_A7VQA6 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQA6_9CLOT Length = 290 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 71/261 (27%), Positives = 133/261 (50%), Gaps = 14/261 (5%) Query: 19 QKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASR 78 +KIADF+ + + ++ Q+A+ +S++S+V+F Q L GF E +++L E + Sbjct: 30 KKIADFVIDHPDQAVHMTVVQLAESCEVSEASVVRFCQCLQYAGFYEFKLSLAAEIVPAS 89 Query: 79 EKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPFI 138 + + IT +D+ I K+ ++ AL++T +L+ + I+ + + Sbjct: 90 QM-------IQEDITVEDTEPTILEKVFAGEQQALQETLQMLNRQDFISAVNHIAFSNKV 142 Query: 139 QITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEI 198 + G + + +D ++L++ G D + + L+ GDV I IS+SGS K Sbjct: 143 EFFSCGNARPIAQDAHYRLLRTGIDSRIGIDDYDCLIHASMLRTGDVAIGISHSGSTKNT 202 Query: 199 VLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDLL 258 + E A+K GAT I IT + +P+ R++ + + S ET +RS +M++R AQ ++ D L Sbjct: 203 IKMLEEAKKNGATTICITGMEKAPITRVSDICMVSHSKETMFRSMAMASRIAQMAIIDAL 262 Query: 259 FVGLVQLNDVESLKMIQRSSE 279 V + S K +RS + Sbjct: 263 VVAV-------SFKRFERSKQ 276 >UniRef50_C8JWL0 Phosphosugar-binding transcriptional regulator n=3 Tax=Listeria monocytogenes RepID=C8JWL0_LISMO Length = 273 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 74/266 (27%), Positives = 143/266 (53%), Gaps = 13/266 (4%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L IS+ +++EQK+A + +N E++++S +A + +S+IV+F++K+G Sbjct: 1 MDLLATISSYFPSLSKSEQKVAQLILSNPDEVENLSINDLALMANVGESTIVRFSRKIGL 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF +L++AL+ +Y S +K N T S+++ +++ R+ L+ T + + Sbjct: 61 TGFQDLKIALV-KYQTS-QKQNITD-------ESNEAKDLVYRQFVD----GLQDTKSFI 107 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + +L++ ++I +A + I +G SA + LS +L ++G V D H+Q+ + Sbjct: 108 EQEKLEQAAKMIHRAEHVYILSVGTSAFIAMQLSNRLKRLGKFVEFVPDGHLQSIYVTMV 167 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 KK D+ I IS SG+ KE++ E A + GA V+ +++ +S + ++ +L S E Sbjct: 168 KKTDIVIGISKSGNTKEVIQNIELASQSGAPVVTLSNFINSKISQMGDVSLVASSKEFLS 227 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLN 266 + S S +Q + D L LV +N Sbjct: 228 DAGSFSAEVSQLYLLDTLIKVLVDIN 253 >UniRef50_C4G9W4 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G9W4_9FIRM Length = 280 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 67/248 (27%), Positives = 127/248 (51%), Gaps = 9/248 (3%) Query: 12 SEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALI 71 ++ T E+KIAD++Q N ++ +S ++A++ ++ +S+ +F + +GA+G+ E +M L Sbjct: 15 NQLTRTEKKIADYVQKNAQKVLFMSITELAEECHVADASVHRFCRTIGAKGYQEFKMWL- 73 Query: 72 GEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEV 131 N +D E I +++ + A+ +T LLD ++ + + + Sbjct: 74 --------SINMGHEKGEEESEEEDGKEPIFQQVLKSHLEAINETNQLLDKEKVDQAVRM 125 Query: 132 ISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISY 191 +++A I G+G S + + K + + +V C DTH+QA + + + D+ +SY Sbjct: 126 LTEARQIMFFGVGDSKTAAIEANNKFLHVTPKVMCAGDTHLQAMAASMMTEEDLLFVVSY 185 Query: 192 SGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQ 251 SGS K+ V A+ A++ GA VI+IT SPL + L S E SM + +Q Sbjct: 186 SGSTKDTVEVAQIAKEAGAKVISITRFLKSPLTEFSDCVLICGSKEGPLEGGSMGAKLSQ 245 Query: 252 NSVTDLLF 259 + D+L+ Sbjct: 246 LHIIDILY 253 >UniRef50_C2H8J8 Bifunctional RpiR family transcriptional regulator/sugar isomerase n=16 Tax=Enterococcus RepID=C2H8J8_ENTFC Length = 286 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 141/260 (54%), Gaps = 8/260 (3%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M +++I + +++ E+K+A+++ N+ ++ ++++ ++A+ G+S ++V+F++K+G Sbjct: 5 MSVISRIESMMEDYSSAEKKLANYIIGNIEKVPTMTANELAEASGLSAPTVVRFSKKIGF 64 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 Q T+ ++ + E ++ S I +++S I KL ++A+++T +L Sbjct: 65 QSLTDFKITISTELQTGIDEG-------FSDIEANESFYSIKNKLGNNAQVAIKETVDIL 117 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + +QK++E + A + + G+G S+LV D+ K ++G + E D HV + Sbjct: 118 EEETIQKVVECLETAESVFLYGVGASSLVVEDILQKWSRVGKPIIFEKDIHVLLPQLVSN 177 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTV-SGETE 239 +K V +S SG ++V AE A+ +IA+T ++PL ++A + T E Sbjct: 178 EKKKVLWLVSNSGRSTDVVALAELAKNMNIEIIALTQFGNNPLSKIADVLVQTSRPKEIT 237 Query: 240 WRSSSMSTRTAQNSVTDLLF 259 RS++ ++ AQ + D++F Sbjct: 238 NRSAATNSLLAQFATIDIIF 257 >UniRef50_C0D6A5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D6A5_9CLOT Length = 282 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 76/264 (28%), Positives = 138/264 (52%), Gaps = 10/264 (3%) Query: 18 EQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSAS 77 E ++ +++ ++ + ++AK+ S +++V+ +K+ +GF L++ L E Sbjct: 22 ENQVREYILKYPKKVLEYTVYELAKESFTSPATVVRLCKKIDIKGFARLKVLLAEETKYF 81 Query: 78 RE-KTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAP 136 ++ K N L ++I +DS I K+ +E+T L++ + ++ ++ KA Sbjct: 82 QDMKLN---LLDTTTIEKNDSPHAIIEKITNIAVKTIEETRVLVNEKQFMQVARLLQKAV 138 Query: 137 FIQITGLGGSALVGRDLSFKLMKIGYRVACEA---DTHVQATVSQALKKGDVQIAISYSG 193 + G+G S+ V D +K M+IG V +VQA S A V I ISYSG Sbjct: 139 IVDFYGVGASSPVAIDAQYKFMRIGKNVITYQLYDRQYVQAVNSDA---SHVGIIISYSG 195 Query: 194 SKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNS 253 KE++ A +K G V+A+TS ++ L R+A + L + ET +RS +M++RTAQ Sbjct: 196 ETKEMLKIAGILQKNGTPVVAVTSSGENSLNRIADYNLFVTAKETVFRSGAMASRTAQLY 255 Query: 254 VTDLLFVGLVQLNDVESLKMIQRS 277 + D+L+ L+ ES+K IQ++ Sbjct: 256 IIDILYALYCSLDYDESIKKIQQT 279 >UniRef50_C2LK66 Phosphosugar-binding transcriptional regulator n=4 Tax=Enterobacteriaceae RepID=C2LK66_PROMI Length = 283 Score = 103 bits (258), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 65/248 (26%), Positives = 131/248 (52%), Gaps = 4/248 (1%) Query: 18 EQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSAS 77 EQ++A +L N + S+++ ++A++ G+S +S+++F++++G G+ E ++ +Y + Sbjct: 19 EQRLAHYLLENSDNIASMNAAELAQKAGVSSASVIRFSRQMGYGGYPEFKI----DYLSE 74 Query: 78 REKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPF 137 ++ +++ L++++ DS E I K A++ + ALLD A + + E + A Sbjct: 75 EKQQKSSSDILYANLAKTDSTEQIIAKTGHLFTTAIQDSIALLDAATIDLLAEKMISAKR 134 Query: 138 IQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKE 197 I + G+G SA+V D+ KL+++ AD H Q S L D+ IA++ G+ + Sbjct: 135 IVLFGVGASAIVASDIFHKLIRVNKNTLFSADLHAQLAYSANLSADDLAIAVTARGNTAD 194 Query: 198 IVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDL 257 I +AA+++G +A+T RLA++TL E + ++ + Q D+ Sbjct: 195 INRMLKAAKQEGCITVALTRFGQDEATRLANYTLPYFYDEQHSQLGVITPQVLQMVAFDV 254 Query: 258 LFVGLVQL 265 LF + L Sbjct: 255 LFFKYMTL 262 >UniRef50_Q7MD38 Transcriptional regulator n=31 Tax=Gammaproteobacteria RepID=Q7MD38_VIBVY Length = 278 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 65/261 (24%), Positives = 134/261 (51%), Gaps = 12/261 (4%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L ++ + F++ + +AD++ N ++Q + +A+ S++++V+ + +G +G+ Sbjct: 8 LVRLRSNMEPFSKKLRVVADYILENAHDVQFQTITDLARNTQTSEATVVRLCRDMGYKGY 67 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 ++ RMAL + S + + H+ I + + +L+ T L+D Sbjct: 68 SDFRMALAVDLSQTESRQQN---HIEGDICDVSAQSAVD---------SLQDTAKLIDRK 115 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L +I+E + +A FI G+G S++VGR L+++L++IG + DTH+ A + +G Sbjct: 116 SLARIVERVHQAEFIGCIGVGASSIVGRYLAYRLIRIGKKAIMFEDTHLAAMSASRSSQG 175 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 D+ A+S SGS KE++ A A K+ V+++T++ SPL L+ L E Sbjct: 176 DLWFAVSSSGSTKEVIHAAGLAYKRDIPVVSLTNINHSPLSSLSTEMLVAARPEGPLTGG 235 Query: 244 SMSTRTAQNSVTDLLFVGLVQ 264 + +++ + D+L L++ Sbjct: 236 AFASKVGALLLVDVLVNSLLE 256 >UniRef50_C7TGD6 Transcriptional regulator, RpiR family n=3 Tax=Lactobacillus rhamnosus RepID=C7TGD6_LACRL Length = 277 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 67/270 (24%), Positives = 142/270 (52%), Gaps = 10/270 (3%) Query: 5 TKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFT 64 ++I+ S E +++AD+ + N +++ + S R ++ ++G+S ++I +FA++LG F Sbjct: 6 SRIAQVYSALGEASRQVADYFRHNYAKVANSSLRNLSDKIGVSTATISRFARQLGFASFD 65 Query: 65 ELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYAR 124 +L++AL+ +E N T + + ++D+ ARK ALE T + L + Sbjct: 66 QLKLALL------KEIDNTT----NGDVETNDNSLASARKTVNANIAALEGTLSFLTQDQ 115 Query: 125 LQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD 184 + + ++ A + + GLG S ++ + +++ + + D H+Q + L + D Sbjct: 116 IDHSVNLLLDANKVALFGLGSSNVIAKAAYHTFLRLPLTLIADNDYHMQLMSANKLTEHD 175 Query: 185 VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSS 244 V I IS++G+ +I+ + +IA+TS SPL + ++S +T +RS + Sbjct: 176 VAIVISHTGNDTDILALVDLLSAHQVPIIAVTSYATSPLAKRVSDVFFSISEDTRYRSDA 235 Query: 245 MSTRTAQNSVTDLLFVGLVQLNDVESLKMI 274 + + T+Q ++ D+L+ LV+ ++S K I Sbjct: 236 LISMTSQLAIFDVLYTELVRRMGLQSEKTI 265 >UniRef50_B9DJX2 Putative RpiR family transcriptional regulator n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=B9DJX2_STACT Length = 288 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 10/250 (4%) Query: 13 EFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIG 72 T+NEQ IA FL + ++ +S++ + S +++++ A KLG +GF +L+++L Sbjct: 16 HLTKNEQHIAQFLLEHPEKVLEMSAQTLGDVTKTSSATVIRCAHKLGFKGFVDLKLSL-- 73 Query: 73 EYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVI 132 SR A H + I D+S I RKL LE T LL+ L+ +++ + Sbjct: 74 ----SRNLPQHEA-HNYKEIAQDESPREIKRKLLSRAAYTLETTEVLLEDQALEALVDKL 128 Query: 133 SKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD--VQIAIS 190 I + G+G S +V D+ K + G V AD HV ATV K D + I +S Sbjct: 129 YDVQKIVVFGVGASHIVAEDIYQKFTRAGMEVIQSADAHVLATVLAGYHKKDNVLFIGVS 188 Query: 191 YSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFT-LDTVSGETEWRSSSMSTRT 249 SG +E + A A GATV AITS +DS L A L S E R ++ S+ Sbjct: 189 NSGHNQETLRLAHVAHYYGATVAAITSRSDSKLAGEADIVLLHDASSEKSLRLAATSSLI 248 Query: 250 AQNSVTDLLF 259 AQ D+LF Sbjct: 249 AQLMTVDILF 258 >UniRef50_A2RL41 Transcriptional regulator, RpiR family n=4 Tax=Lactococcus lactis RepID=A2RL41_LACLM Length = 283 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 74/275 (26%), Positives = 141/275 (51%), Gaps = 6/275 (2%) Query: 12 SEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALI 71 S FT E+KIAD++ ++ S++++A ++G S +++V+F++KLG GF++L+ L Sbjct: 12 SNFTTVEKKIADYIFEVGEKMLEKSAQEVASEIGSSSAALVRFSRKLGYDGFSQLKQKLS 71 Query: 72 GEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEV 131 Y+ + + + + ++ I KL +E T A L + + + Sbjct: 72 ASYAVHEDDED-----YYKEVNDSETPSSIKNKLKVRVNHMVETTNAALSDDEIMAAVAL 126 Query: 132 ISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISY 191 I +A I + G+G S++V +D+ K +IG +V D H+ + + + I IS Sbjct: 127 IDEAESIFVFGIGASSMVAQDIFQKFSRIGKQVFFIQDAHLFVSSLSISDRKTIFIGISM 186 Query: 192 SGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGET-EWRSSSMSTRTA 250 G KE++ A R +IAITS +S L +++ + L +VSGE + R+++ + A Sbjct: 187 KGETKEVIELARVVRGMEIPIIAITSREESTLGQMSDYILHSVSGEDYQMRTAATMSLMA 246 Query: 251 QNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 Q V D+LF V + ES ++++ + + L+ Sbjct: 247 QLYVVDILFYMFVSEHFTESYDKLEKTRDAIKLLE 281 >UniRef50_C1IBM1 Phosphosugar-binding transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IBM1_9CLOT Length = 266 Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 64/265 (24%), Positives = 137/265 (51%), Gaps = 18/265 (6%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L ++ +EF++ E+ IAD++ + ++++++ +AK++G S ++I +FA+K+G F Sbjct: 4 LCEVQRKYNEFSDKEKDIADYIMQHGDKIKNINITDLAKEIGTSGATITRFAKKIGCDSF 63 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 ++++ L +N L I +D + + E +E+T L+D Sbjct: 64 VDMKIKL---------GSNKVEL----PINDEDGIFSYTYQYYNE---VIERTKMLIDKE 107 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 + K++ I KA I I G+G S L +++ +L+++G+ V C +D+H+ S + + Sbjct: 108 EIFKVVNEIKKAKNIYIYGVGSSGLTCKEMMQRLLRMGFNVHCISDSHMMIINSSIVSEN 167 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 D+ I IS SG +E++ +++ GA +++IT S + + + + RS Sbjct: 168 DLVIGISISGETQEVIHSLRKSKENGAKIVSITGFEGSTVSKYSDIKFIVYNPNFVDRSR 227 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDV 268 ++T+ + + DL + +V L D+ Sbjct: 228 FINTQFSAMYLLDL--ISMVLLKDI 250 >UniRef50_D0I0X8 Sialic acid utilization regulator RpiR family n=1 Tax=Vibrio cholerae CT 5369-93 RepID=D0I0X8_VIBCH Length = 282 Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 115/211 (54%), Gaps = 11/211 (5%) Query: 14 FTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGE 73 ++ + +ADF+ +N Q ++ ++A+ S++++++ + LG +G+++ RMAL E Sbjct: 20 YSPKLKTVADFIVSNADSAQYLTITELARDTMTSEATVIRLCRDLGFKGYSDFRMALAIE 79 Query: 74 YSASR-EKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVI 132 S + K N A I DD+ + +L+ T L+D ++ +I ++I Sbjct: 80 ISQPQFTKNNDVAKEDGDRI--DDATQ--------SAITSLQDTSILIDRKQINRICQMI 129 Query: 133 SKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYS 192 +A I G+G S++VGR LSF+L +IG DTH+ A + D+ AIS S Sbjct: 130 HQADNIHCVGVGASSIVGRYLSFRLTRIGKSSTMFEDTHIAAMRAVKSTPSDLWFAISSS 189 Query: 193 GSKKEIVLCAEAARKQGATVIAITSLTDSPL 223 GS K++V A A+KQ + V+++T++ SPL Sbjct: 190 GSTKDVVYVATRAKKQQSPVVSLTNIRHSPL 220 >UniRef50_B1R0U2 Transcriptional regulator, RpiR family n=9 Tax=Firmicutes RepID=B1R0U2_CLOBU Length = 284 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 71/254 (27%), Positives = 136/254 (53%), Gaps = 15/254 (5%) Query: 14 FTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGE 73 F E E+KIAD++ ++L ++ ++A+ G S +++ +F +K +GF L++ L E Sbjct: 18 FFEAEKKIADYILKYGTKLIEMTISELAEAAGTSDATVTRFCRKCNMKGFHHLKITLAKE 77 Query: 74 YSASREKTNATALHLHSSITSDDSLEVIARKLNR---EKELALEQTCALLDYARLQKIIE 130 S S+++ + ++ D S E I LN K ++QT ++ + ++I++ Sbjct: 78 LSESQKE--------DTRVSGDVSEENIKESLNNILFNKIEEMKQTILTINEEKFKEILQ 129 Query: 131 VISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADT--HVQATVSQALKKGDVQIA 188 ++ A +Q +G + V D +K ++G VA A+T Q + LK+ DV IA Sbjct: 130 ILRNAGIVQFVAVGNTIPVALDGCYKFNQVG--VASVANTIWETQIAYTYNLKENDVVIA 187 Query: 189 ISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTR 248 IS SG+ K ++ E A+++GA IAIT+ SPL +L+++ + T + E + +R Sbjct: 188 ISNSGASKRLIDVIEIAKEKGAVTIAITNSDKSPLAKLSNYHIKTATREKLFLEEYYFSR 247 Query: 249 TAQNSVTDLLFVGL 262 + +V ++LF+ + Sbjct: 248 ISAMTVIEILFLFM 261 >UniRef50_C5C1Y9 Transcriptional regulator, RpiR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C1Y9_BEUC1 Length = 307 Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/242 (29%), Positives = 125/242 (51%), Gaps = 9/242 (3%) Query: 39 QMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSL 98 +A+ G S S++ + ++LG G+ LR+A++ + +AS ++ + + +I DSL Sbjct: 53 DLAEASGTSPSAVSRLCRRLGVDGYPALRIAVVADATAS--ASSPWEIDISRTIGPTDSL 110 Query: 99 EVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLM 158 E +A L A+ T A LD L+ + ++ A + + G+ GSA++ +L +L Sbjct: 111 EDVAGTLGAATSRAVHDTLAGLDLDVLRDVAHAVAGARRVHLYGVSGSAVMTAELQLRLH 170 Query: 159 KIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSL 218 +IG AD H T + L GDV IA+SY+G E + AA + A +A+T Sbjct: 171 RIGIATWSFADVHEGLTGAALLGPGDVAIAVSYTGETIETLEMLRAAGSRDALTVAVTGA 230 Query: 219 TDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSS 278 S L +A L TV+ ET +R ++ R ++ +V +LL++ + QL +R++ Sbjct: 231 PRSSLAAVADRILVTVTEETTFREGPLAARFSELTVVELLYLAVGQLT-------YERTT 283 Query: 279 EL 280 EL Sbjct: 284 EL 285 >UniRef50_A8F3D9 Transcriptional regulator, RpiR family n=1 Tax=Thermotoga lettingae TMO RepID=A8F3D9_THELT Length = 276 Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 72/249 (28%), Positives = 120/249 (48%), Gaps = 16/249 (6%) Query: 13 EFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIG 72 +FT+ E ++A F+ + E+ +S ++ +L I Q ++V+F QKLG GF ++AL Sbjct: 15 QFTKKENELAQFVIDHPDEVIHMSITEIVDELRIGQGTVVRFCQKLGFSGFHPFKIALAK 74 Query: 73 EYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYAR--LQKIIE 130 E + + L ++ +D ++ A+E+T LL + + E Sbjct: 75 SLGRQEEASEGSKDML--AMVKEDHIK------------AIEETSKLLKLNEKVVYQCAE 120 Query: 131 VISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAIS 190 IS + + G+G S + D +K M+IG V D H QA + D +A S Sbjct: 121 KISNCRRLYLLGVGASGVTALDAYYKFMRIGVDVKYMLDPHFQAMSLSGCNEKDCVVAFS 180 Query: 191 YSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTA 250 SGS +V A+ A++ A VIA+T SPL A F L T E ++S ++ ++ A Sbjct: 181 QSGSTAVVVDMAQIAKQNKACVIAVTGYNKSPLTFYADFVLLTAVRENPFQSGAIRSKIA 240 Query: 251 QNSVTDLLF 259 Q V ++LF Sbjct: 241 QLHVLEVLF 249 >UniRef50_D2PUN7 Transcriptional regulator, RpiR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PUN7_9ACTO Length = 294 Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 78/262 (29%), Positives = 128/262 (48%), Gaps = 6/262 (2%) Query: 5 TKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFT 64 T+I T EQ++A+ + A+ + Q+A++ S +++ +F + LG G+ Sbjct: 6 TRIRGLVPTLTPAEQRVAEQVLADPLGTHRGTIGQLAERSRTSLTTVTRFCRALGMAGYQ 65 Query: 65 ELRMALIGEY--SASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 ELR AL E ++SR+ T A + I DD ++ + L AL++T + LD Sbjct: 66 ELRFALATEAGEASSRDWTLGAA----ADIGPDDPMQSVLANLVATDVRALQETASQLDL 121 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 A +++++ I+ A + + + GSA V DL +L ++G D H + L Sbjct: 122 AVAEQLVDAITTARRVDLYAVSGSAAVTNDLQRRLHQLGITCHLWIDVHDALASATLLGP 181 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 DV I IS+SG E++ AAR GA A+T+ S + +A L T + E +RS Sbjct: 182 EDVAIGISHSGETIEVIEPLTAARDAGAVTAAVTNFPRSAITSVAGLLLTTSAREATYRS 241 Query: 243 SSMSTRTAQNSVTDLLFVGLVQ 264 S+S R Q V D L G+ Q Sbjct: 242 GSLSGRHTQLLVIDCLVTGVAQ 263 >UniRef50_C2C2H3 Bifunctional RpiR family transcriptional regulator/sugar isomerase n=1 Tax=Listeria grayi DSM 20601 RepID=C2C2H3_LISGR Length = 282 Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 77/283 (27%), Positives = 141/283 (49%), Gaps = 9/283 (3%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L +I + ++E+K+A+ + + + + S +AK+ S ++IV+F + LG + F Sbjct: 7 LNRIETLFKDLPKSEKKVAEMVLQDPAFASASSIHSLAKRADTSAAAIVRFCKSLGLKSF 66 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 + + L E S+ + D+S + I++KL L T + A Sbjct: 67 PDFKRQLYSELSS-------PVASGYYDFEEDESFDGISQKLLANYFQTLNDTAGQISEA 119 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 +++ + E + KA I G+G S LV +D++ K ++ G +V D HV A A K G Sbjct: 120 KIRTVSEQLEKADTIYTYGVGASWLVAQDIAQKWLRAGKQVVISQDEHVLAMAFAARKSG 179 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTV-SGETEWRS 242 V A+S SG ++ AE A++ TVI +T S L+ A F L+T + E ++RS Sbjct: 180 -VFFAVSNSGETTSVIELAEQAKQNNLTVIGLTRFGPSKLKAKADFLLETSRAPEAKFRS 238 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 ++ S++ AQ + D+L+ V + + ++ I+ S + T R + Sbjct: 239 TATSSKQAQFFIIDVLYYHYVSRHYDQMIEQIRESRQATDRFR 281 >UniRef50_C4L7F8 Transcriptional regulator, RpiR family n=2 Tax=Gammaproteobacteria RepID=C4L7F8_TOLAT Length = 292 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 80/279 (28%), Positives = 143/279 (51%), Gaps = 7/279 (2%) Query: 6 KISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTE 65 KI A + E++IA++L A + S + +A+QL +S+ IVK ++KLG GF E Sbjct: 14 KIRMALPGLSNTERQIAEWLLAKGNVESKTSIKSVAEQLEVSEPLIVKLSKKLGFAGFRE 73 Query: 66 LRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARL 125 LR AL+ EY +S + I DS+E + K+ A+++ ++ D + Sbjct: 74 LRQALV-EYLSS------LPIDSEQEIEPTDSVESVLNKVFANSIQAMKEARSVADPILI 126 Query: 126 QKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDV 185 ++I A + I G+GGSA V +D KL++IG +D H+ VS L + DV Sbjct: 127 ANAAQLIFNAKNVVIFGVGGSAAVCQDFEHKLLRIGILSRAYSDFHMMLMVSSQLDENDV 186 Query: 186 QIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSM 245 + IS SG +E++ E A+++ + VI IT+ S L +LA + + + + + Sbjct: 187 IVVISQSGDTRELLKAVENAKQRHSRVICITNNDTSALAQLADYAIFSPAKGGILLGQNA 246 Query: 246 STRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 R Q ++ D+LF+ ++ + ++ + + R S + + L Sbjct: 247 VARIVQLNLLDVLFIAILLQDHDKNREKLTRGSRVVRHL 285 >UniRef50_P0ACS8 HTH-type transcriptional regulator rpiR n=34 Tax=Gammaproteobacteria RepID=RPIR_ECOL6 Length = 296 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 69/254 (27%), Positives = 127/254 (50%), Gaps = 11/254 (4%) Query: 15 TENEQKIADFL--QANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIG 72 TENE +I ++L N+S ++ + +A+ L +S++ IVK ++ LG GF LR AL Sbjct: 28 TENESRIVEWLLKPGNLSCAPAI--KDVAEALAVSEAMIVKVSKLLGFSGFRNLRSALED 85 Query: 73 EYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVI 132 +S S + L S + D++ + + K+ + + ++++ + + Sbjct: 86 YFSQSEQV-------LPSELAFDEAPQDVVNKVFNITLRTIMEGQSIVNVDEIHRAARFF 138 Query: 133 SKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYS 192 +A + G GGS + D+ K ++IG R D H+ + L++GDV + +++S Sbjct: 139 YQARQRDLYGAGGSNAICADVQHKFLRIGVRCQAYPDAHIMMMSASLLQEGDVVLVVTHS 198 Query: 193 GSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQN 252 G ++ E A+K GA +I IT SP+ +LA + + + + ET + S R Q Sbjct: 199 GRTSDVKAAVELAKKNGAKIICITHSYHSPIAKLADYIICSPAPETPLLGRNASARILQL 258 Query: 253 SVTDLLFVGLVQLN 266 ++ D FV + QLN Sbjct: 259 TLLDAFFVSVAQLN 272 >UniRef50_C2KD15 RpiR family transcriptional regulator n=3 Tax=Lactobacillus crispatus RepID=C2KD15_9LACO Length = 279 Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 67/227 (29%), Positives = 121/227 (53%), Gaps = 10/227 (4%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M +LT + N + + E+KIA F+ + +QS + Q+A + +S ++I +FA+++ Sbjct: 1 MTFLTDLQNRLPDLPQQERKIALFILQDPQFIQSANINQLASTIKVSNATITRFARRVNC 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 FT+L++ L ++S+ T IT+ D+ + A ++ L +T L Sbjct: 61 SSFTDLKVKLAAAAASSQVNT----------ITNQDNSKTTAHQVYDFYNRVLSETQNKL 110 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D +L+KII++I A + G+G S + + +L+++G E +++ S + Sbjct: 111 DIKQLKKIIQLIKSAKRVYFYGIGSSGYTSLEATQRLLRMGISAFAETESNNMFMTSSII 170 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLA 227 K D+ IAIS +GS +V E A+K ATV+A+TS +SPL +LA Sbjct: 171 SKDDLIIAISSTGSTDSLVRAIELAKKNKATVVALTSYDNSPLAQLA 217 >UniRef50_C2D9S0 RpiR family transcriptional regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9S0_9ACTN Length = 282 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 74/249 (29%), Positives = 119/249 (47%), Gaps = 5/249 (2%) Query: 17 NEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSA 76 +EQ+I ++ + V+ ++A+ +S ++I + +KL G+ E + LI E ++ Sbjct: 20 SEQQIITYILKKPEAIVGVTIHELAQMTFVSAATISRLLRKLSLGGYKEFQQYLIYELAS 79 Query: 77 SREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAP 136 + ++ I DS + I K+ R+ ++ T L + + E+I A Sbjct: 80 MKTSRQSSI----EDINPKDSTKQIMFKIMRKTIESITLTEKLNNPKTIDSCAELIHNAR 135 Query: 137 FIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKK 196 I I G+G S L +DL +K ++ AD H+Q + + GDV IA SYSG Sbjct: 136 HITIFGMGSSLLSAQDLQYKFLRANIDCTLSADWHMQLIAANNMSDGDVAIAFSYSGVTP 195 Query: 197 EIVLCAEAARKQGATVIAIT-SLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVT 255 E + C AA+ G VIAIT S+ + L R A L S E RSS+ ++R Q + Sbjct: 196 ETLRCVHAAQDHGGKVIAITRSVNSTELVRHADIVLYVASTEPLLRSSAGTSRITQLMIV 255 Query: 256 DLLFVGLVQ 264 D LF LV Sbjct: 256 DTLFSTLVN 264 >UniRef50_D0KLH9 Transcriptional regulator, RpiR family n=1 Tax=Pectobacterium wasabiae WPP163 RepID=D0KLH9_PECWW Length = 320 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 73/264 (27%), Positives = 130/264 (49%), Gaps = 8/264 (3%) Query: 5 TKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFT 64 T I+N ++ Q IA+++ N S + + +++A ++G+S+++IV+F + +G G Sbjct: 38 TYIANILHGLSDTNQTIANYVLQNPSMVAQLPVKKLAVEIGVSEATIVRFCKHIGYAGLL 97 Query: 65 ELRMALIGEYSASREKTNATALHLH--SSITSDDSLEVIARKLNREKELALEQTCALLDY 122 EL+ AL +RE + + L L I +D+ +A+K+ + A+++T L+D Sbjct: 98 ELKSAL------NRELFDDSDLSLPVTPDILMNDTRHDVAQKIALTVDRAVKETIDLIDM 151 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 + +I+ + A + G G S L + K+ +IG D LK Sbjct: 152 QTINQIVSLFISARRVMFIGFGASGLAALEARDKMNRIGIDSDAFTDRFSMTLKLANLKP 211 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 D+ +A S+SG E+V + A K GAT +AIT T SPL L ++ L T ++ Sbjct: 212 DDLVVAFSHSGETPEVVNAFKLAEKAGATRLAITHSTHSPLTSLGNYVLLTCGESERYQG 271 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLN 266 S+ TR +Q + + L L + N Sbjct: 272 DSIGTRVSQLFMIEFLCTELTKQN 295 >UniRef50_C4FU45 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FU45_9FIRM Length = 277 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 63/214 (29%), Positives = 116/214 (54%), Gaps = 15/214 (7%) Query: 18 EQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSAS 77 EQ +A ++ +++ +MAK+ G+S ++I +F +K+G + F +L++ L + Sbjct: 18 EQLLATYIMQESPYFTNITISEMAKETGVSAATITRFCRKVGCESFVDLKIQL-----QA 72 Query: 78 REKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPF 137 E +A+ H D + ++ NR +++T L +L+++I+V+S+A Sbjct: 73 SEGESASNHQNH------DMFDTVSEFYNR----IIQRTSELQSEYQLRQLIQVLSQANR 122 Query: 138 IQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKE 197 I + G+G S L R+L+ +L ++G E D+H+ S + DV IAIS SG K+ Sbjct: 123 IMVYGMGSSGLTARELAIRLSRMGLPATSETDSHMMIISSTVTRSSDVVIAISNSGETKD 182 Query: 198 IVLCAEAARKQGATVIAITSLTDSPLRRLAHFTL 231 ++ A++ GA ++AITS+ S L +LA TL Sbjct: 183 VIDALGNAKQNGAILVAITSMKGSSLAKLADETL 216 >UniRef50_Q02VU4 Transcriptional regulator n=4 Tax=Lactococcus lactis RepID=Q02VU4_LACLS Length = 282 Score = 100 bits (248), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 130/257 (50%), Gaps = 7/257 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 +++I + ++++Q I+D+L AN+ +S ++ A++ +S ++I +F++K+G F Sbjct: 6 ISRIRSYYDNLSKSDQAISDYLIANIDSAAMLSIQEFAQKTQVSTATISRFSKKIGFNSF 65 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 EL++A I ++R+ + L +DD E++ + N +L T L+ Sbjct: 66 QELKLA-IHATDSTRDDEFFSELS-----PTDDYKEILTKNFNGNIS-SLNSTLNLISNR 118 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 +L + +E++ KA GLGGS V K +++ D H Q + L Sbjct: 119 QLDQTMEILLKANTCGFFGLGGSNAVALIAFHKFLRMPLHCVYHQDFHFQQMQAAKLTSE 178 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 D IS++G K+ + E + +G +IA+TS SPL + A L ++S E +R Sbjct: 179 DCAFVISHTGKNKDTMHLVEILKSRGVPIIALTSFASSPLAKAADVALISISEEISFRPE 238 Query: 244 SMSTRTAQNSVTDLLFV 260 ++++ +Q S+ D LF+ Sbjct: 239 AVASTVSQISLLDALFM 255 >UniRef50_Q040R4 Transcriptional regulator n=8 Tax=Lactobacillus RepID=Q040R4_LACGA Length = 283 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 77/282 (27%), Positives = 133/282 (47%), Gaps = 8/282 (2%) Query: 5 TKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFT 64 TK+ N F +KIAD+L A+ ++ + K S +S+++F Q+LG +G Sbjct: 5 TKVLNNYPNFKGASKKIADYLLAHPKTFLQEDAQGLGKMTKTSAASMIRFCQQLGFKGLK 64 Query: 65 ELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYAR 124 + ++ L + E+T + H D+ ++ +KL E EQT L+D Sbjct: 65 DFQIQLAQDTPQDNEETIDPIVDHH------DNPHIVLQKLLSSIEKNTEQTAHLIDGLA 118 Query: 125 LQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD 184 L + I + A I + G+G S+L +DL +K ++ V D H+ D Sbjct: 119 LNQAINFLKNADRIYLAGVGASSLPAQDLYYKFIRSDKNVVFNQDIHIALERICYSHSTD 178 Query: 185 VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSS 244 + SYSG +EI+L A+ ARK +I +T SPL LA L + E R + Sbjct: 179 ALVIFSYSGLTQEILLMADQARKNHTPIIVVTRSRQSPLVELADVVLGVSTDEKLLRVGA 238 Query: 245 MSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSEL-TQRLK 285 +++ ++ V+ +LF+ + ++ L+ R +EL T +LK Sbjct: 239 INSLFSEMFVSSVLFLATIN-QELPRLEERFRETELITNQLK 279 >UniRef50_A8UCF6 Phosphosugar-binding transcriptional regulator, RpiR family protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UCF6_9LACT Length = 292 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 66/273 (24%), Positives = 136/273 (49%), Gaps = 5/273 (1%) Query: 14 FTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGE 73 F + E+ IAD ++ + + +A G+S+++I KF +K+G GF ++++ Sbjct: 17 FNDTEKIIADHFIKLGHDVVNKTLSNLADDTGLSEATIFKFVKKIGFDGFPNFKISVASN 76 Query: 74 YSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVIS 133 + E+ N L + S I+ +DS IA+KL +LAL+ LD R+ + + +I Sbjct: 77 FQNIEERKNE--LTVFSDISKEDSSYAIAQKLVYSNKLALDNLIGSLDEERINQALNLIY 134 Query: 134 KAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSG 193 + I G G S+++ D K ++ + +D H+Q + + L D S+SG Sbjct: 135 DSQTIHFFGQGASSVIALDSYHKFLRTRFLCNYISDYHMQLSYATKLGPNDCVFLFSHSG 194 Query: 194 SKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNS 253 E + A R +I +T + L +L+ + S E+ ++S ++++R + Sbjct: 195 ETNETIEVARILRNNQVNIIVLTGNHHTDLVKLSSISFVVDSEESAFQSETLTSRILYLT 254 Query: 254 VTDLLFVGLVQLNDV---ESLKMIQRSSELTQR 283 + D+L+V L+ ++ +SL+ I+++ +T++ Sbjct: 255 IIDILYVALMYHDEAKNKDSLEKIRKALAVTKK 287 >UniRef50_A4WDW6 Transcriptional regulator n=10 Tax=Enterobacteriaceae RepID=A4WDW6_ENT38 Length = 274 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/264 (25%), Positives = 133/264 (50%), Gaps = 15/264 (5%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L ++ S ++ +QK+ F+ + S + ++ ++A++ S++S+ + + LG +G+ Sbjct: 8 LLRLRQGVSGYSPTQQKLGSFVLNDPSRVLYLTITELARESDTSEASVTRLCRTLGCKGY 67 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 TE +MAL RE H + D ++ I E LAL+ T LLD Sbjct: 68 TEFKMAL--ALDVQRE---------HVPLKKGDEIDEIVE----ESILALQDTSRLLDRE 112 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L K + + ++ + I G+ SA++G L +KL+++G +D H + + L Sbjct: 113 ILLKAAQALHQSRSVYIYGVAASAIIGDYLHYKLLRLGKPAQLFSDMHRASMNATTLTSD 172 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 D+ +AIS SGS ++++ + ARK+GA V+A+++ SPL L+ L E + Sbjct: 173 DLVVAISSSGSTRDLLHVVKLARKRGAHVLALSNTPRSPLTSLSDMLLVAAKPEGPLSAG 232 Query: 244 SMSTRTAQNSVTDLLFVGLVQLND 267 +++ + + +LL ++ L+D Sbjct: 233 ALNAKVGVMLLVELLATTMISLDD 256 >UniRef50_UPI00017F2FF2 transcriptional regulator n=1 Tax=Escherichia coli O157:H7 str. EC4024 RepID=UPI00017F2FF2 Length = 285 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 78/278 (28%), Positives = 140/278 (50%), Gaps = 12/278 (4%) Query: 12 SEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALI 71 +E T+ E +I F++ N +S ++A + + ++SI++F +KLG +G +EL+ L Sbjct: 16 NELTQTEIRIYQFIKNNRMRFIDMSIAKLADAMNVGEASIIRFCKKLGYKGLSELKTTL- 74 Query: 72 GEYSASREKTNATALHLHSSITSDD----SLEVIARKLNREKELALEQTCALLDYARLQK 127 R +T+ T L S +TS D S+ IA++L A+ +T AL + L + Sbjct: 75 ------RLETD-TDDTLLSKVTSLDEQTNSMTGIAQQLANNNYFAINETLALQEEQALVR 127 Query: 128 IIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQI 187 + +S A + G+G SA+ ++ M+I V D H S + K DV + Sbjct: 128 AADYLSNAGQVYFYGIGMSAISVLYAKYRFMRIMANVDALIDNHTMTLNSNNVGKKDVVV 187 Query: 188 AISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMST 247 AIS+SG +++V + +++GA I I+ L S L + A L T ++S S + Sbjct: 188 AISHSGETRDVVDALKRVKEKGAVTIVISKLQHSSLSQYADVVLLTGGTSNPYQSDSSTI 247 Query: 248 RTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 AQ+ + D+LF L+ +N +++ I S ++ + K Sbjct: 248 TAAQSFMVDVLFNALLFINRGGNVEKIISSLDIINKTK 285 >UniRef50_C1PED1 Transcriptional regulator, RpiR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PED1_BACCO Length = 289 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 64/253 (25%), Positives = 132/253 (52%), Gaps = 7/253 (2%) Query: 12 SEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALI 71 + +++E+K+ +++ ++ E + ++ ++AK+ G+S +++V+F + +G GF++L++ L Sbjct: 16 TSLSKSEKKLGEYILSHAVETVNDNTSELAKKAGVSPATVVRFCRSIGLSGFSQLKIRLY 75 Query: 72 GEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEV 131 + S ++ +++ IT ++ + +IA KL ++ QT LL+ + ++KI + Sbjct: 76 ADASGGLDR------EIYTDITPNEDITMIADKLALRFNQSITQTANLLETSCIEKITAM 129 Query: 132 ISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISY 191 + K+P I + G+G S + D + K +IG V D H+ + K + +AIS Sbjct: 130 VDKSPAIYVYGIGASHVAAEDFTHKFSRIGKPVVHTLDHHLLGSSLINASKDCMFVAISN 189 Query: 192 SGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETE-WRSSSMSTRTA 250 SG E + + A++ G + IT DS L + L GE RS++ ++ A Sbjct: 190 SGETNEAIKLTQIAKQNGLFTVGITQKRDSTLASIVDAPLIHHGGEAVLLRSAATTSLAA 249 Query: 251 QNSVTDLLFVGLV 263 Q D+L+ V Sbjct: 250 QLFTIDVLYFAYV 262 >UniRef50_Q02YU6 Transcriptional regulator n=4 Tax=Lactobacillales RepID=Q02YU6_LACLS Length = 273 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/245 (29%), Positives = 130/245 (53%), Gaps = 14/245 (5%) Query: 14 FTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGE 73 T++E+KIA+++ A+ + + + K + + ++IV+F QKLG GF++L++ + E Sbjct: 14 LTKSEKKIANYVLASKERIVYGTMNDIKKAIKVGDATIVRFCQKLGYSGFSDLKIEVAKE 73 Query: 74 YSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVIS 133 S S++ +N T L L + +E+ L +T + LD + +K ++IS Sbjct: 74 -SYSQKSSNRTDLTLFFDENENSIIEI------------LHETKSKLDLEQFEKSSKLIS 120 Query: 134 KAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSG 193 +A I I G+G S +DL ++IG V + +H Q + LKK D+ I IS SG Sbjct: 121 EASAIYIFGVGLSGNTAKDLEAMFLRIGVPVKAISGSHFQLQTAALLKKTDLIIGISLSG 180 Query: 194 SKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNS 253 E+ + A++Q A +I ITS SPL +L+ L TV+ E + S++ + +Q Sbjct: 181 KTLELFESIKIAKEQKAQIITITSSDYSPLAQLSDINLQTVNEEF-FDGGSLTGKISQLY 239 Query: 254 VTDLL 258 + ++L Sbjct: 240 ICEIL 244 >UniRef50_A4E6N7 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6N7_9ACTN Length = 301 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 66/228 (28%), Positives = 121/228 (53%), Gaps = 15/228 (6%) Query: 14 FTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGE 73 ++E+EQ+I D++ + SE +++ Q+++ S++++ +F +KLG F + +L + Sbjct: 34 YSESEQRIVDYILEHQSEAPRLTAAQLSRAAATSEATVSRFCRKLGFGSFRSFQFSLARD 93 Query: 74 YSASREK--TNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEV 131 + R + T+ +L D++E + + K L T +D+ L ++ Sbjct: 94 LESQRNEGLTDEVSL---------DNMEQSLKNILAAKVSELNATIDGIDHDTLAAVVHA 144 Query: 132 ISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL--KKGDVQIAI 189 + A I+ +G + V D +FK ++G R C A T + ++ AL + GDV + I Sbjct: 145 LKHAGVIEFAAVGNTNAVALDATFKFSQLGLR--CMASTISETSIGFALTLRPGDVIVLI 202 Query: 190 SYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGE 237 S SG + + A+AAR GATV+ I+S + SPL RLA +T +TV+ E Sbjct: 203 SNSGKSRRLNRMAKAARNCGATVVVISSDSKSPLARLADYTFNTVNHE 250 >UniRef50_C2L140 RpiR family transcriptional regulator n=6 Tax=Clostridiales RepID=C2L140_9FIRM Length = 285 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 68/261 (26%), Positives = 131/261 (50%), Gaps = 10/261 (3%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 +LTKI +A ++FT+ E+K+AD++ N ++ +S +A+ + +S+ +F + + +G Sbjct: 5 FLTKIRSAYNQFTKAEKKVADYILQNPDQVLFMSISDLAETCKVGDTSVFRFCKTMNVKG 64 Query: 63 FTELRMALI----GEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCA 118 + E +M L G S+E D+++ +A K+ E ++++T + Sbjct: 65 YQEFKMTLSLSMRGNGKESKEGDGGNV------SLQDNNIAELAGKVLEETIDSIKETHS 118 Query: 119 LLDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQ 178 LLD+ ++ + + +SKA I G+G S L K +I +V C Q + Sbjct: 119 LLDFNKVTEAMNALSKAKRILFFGVGASMLTAMKAMNKFHRIEPKVYCSEMVSQQLMSAA 178 Query: 179 ALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGET 238 +++GDV + SYSG+ ++IV A+ A++ GATV++IT S L L + Sbjct: 179 TMERGDVAVIFSYSGATRDIVEIAKLAKESGATVVSITRFQKSELTDYTDILLLCGANVG 238 Query: 239 EWRSSSMSTRTAQNSVTDLLF 259 + S S +Q + D+++ Sbjct: 239 SLQKGSTSAEISQLFLVDIMY 259 >UniRef50_A8UBX8 Phosphosugar-binding transcriptional regulator, RpiR family protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UBX8_9LACT Length = 285 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 67/271 (24%), Positives = 139/271 (51%), Gaps = 8/271 (2%) Query: 14 FTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGE 73 ++E+KIA+ + + ++ +S+ +A + G S +++++F + +G +GFTEL++ L + Sbjct: 16 LPQSEKKIAETILRDPVKVIQMSATDLATEAGSSSAAVIRFCRSIGIKGFTELKLQLSAD 75 Query: 74 YSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVIS 133 ++ +L++ I +D++LE + +K+ ++T +LD +++++ E++ Sbjct: 76 SQGIKD-------NLYTDILADENLEQVKKKMLINTNHLFKETNNVLDTKQIERVSELLH 128 Query: 134 KAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSG 193 ++ I + GLG S +V D+ K ++G V C D H+ T + V +S SG Sbjct: 129 ESSIIYLYGLGASHIVASDIQQKFSRMGKIVVCSLDQHLLVTSMAVAGENAVFFGVSNSG 188 Query: 194 SKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDT-VSGETEWRSSSMSTRTAQN 252 KKE++ A++ G +A+T+ T++ L A L T + E RS + + Q Sbjct: 189 EKKEVLALMIMAKELGLKTVALTNNTENALSLEADIALKTAFAHEAPLRSGATISLLTQM 248 Query: 253 SVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 D+LF N ++ +++S QR Sbjct: 249 YAVDILFYDYASKNYDLTVTNLEKSKAAIQR 279 >UniRef50_D2BPE4 Transcriptional regulator, RpiR family n=1 Tax=Lactococcus lactis subsp. lactis KF147 RepID=D2BPE4_LACLK Length = 273 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 65/251 (25%), Positives = 124/251 (49%), Gaps = 11/251 (4%) Query: 14 FTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGE 73 F E+E+KIA+F+ N ++ + +A+ +S++SI +F +KL GF +L++ L Sbjct: 14 FFESEKKIAEFILKNPKKVIDMPIALLARNSNVSEASISRFCKKLNLTGFHQLKIEL--- 70 Query: 74 YSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVIS 133 +R + N + + SL + + +++ K L LD LQ II++I+ Sbjct: 71 ---ARIQDNENI-----KVNKNTSLNELIKNISKIKTTELIAATDNLDIDNLQSIIKIIT 122 Query: 134 KAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSG 193 G + V D S++ ++G D VQ + ++K D+ I IS SG Sbjct: 123 NVKLTHFVASGNTIPVAEDASYRFNQLGITSVVFDDWQVQTAFTLNMRKEDLLIVISNSG 182 Query: 194 SKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNS 253 K ++ A+++ +I+IT+ DSP+ RL++F L + S + + + +R + Sbjct: 183 ESKSLIKLINIAKEKKIPIISITNHPDSPIARLSNFHLTSFSRDYFFHNDYYFSRLSAMY 242 Query: 254 VTDLLFVGLVQ 264 + +L+F+ L Q Sbjct: 243 LIELIFLILSQ 253 >UniRef50_C0X1P6 Transcriptional regulator RpiR n=21 Tax=Enterococcus RepID=C0X1P6_ENTFA Length = 285 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 72/277 (25%), Positives = 135/277 (48%), Gaps = 17/277 (6%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M Y+ I+ T++E+K+ADF+ + + + + + + ++I++F QKLG Sbjct: 14 MNYIYLINEHYPLLTKSERKVADFILNSGESIIYSTMNDIKTKANVGDATIIRFCQKLGF 73 Query: 61 QGFTELRMALIGE-YSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCAL 119 GF++L++ + E +S +E+ ++ H + +A+ L L+ T L Sbjct: 74 SGFSDLKIEIAKEDFSKKKEQPSSGKYH-----------DEVAKSLIE----VLQSTSCL 118 Query: 120 LDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQA 179 ++ +L K I++I++A + I G+G S DL +++G + D H QA V+ Sbjct: 119 INEEKLTKAIQLINQASSLYIFGVGSSGNTSLDLESMFLRVGIQAKAVLDPHYQAQVASL 178 Query: 180 LKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETE 239 L D+ I S SG K+ + A+ GA ++AIT+ SP+ + A L T E Sbjct: 179 LTDRDLVIIFSLSGKTKDTYDSLKIAKNNGAKILAITNYIHSPIGKSADLVLQTAIEEF- 237 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQR 276 S++ + +Q + DLL Q N + SL + ++ Sbjct: 238 LNGGSLAGKISQLYICDLLVHEYEQNNKINSLDLREK 274 >UniRef50_C6L9A2 Transcriptional regulator, RpiR family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L9A2_9FIRM Length = 336 Score = 96.7 bits (239), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 72/257 (28%), Positives = 123/257 (47%), Gaps = 19/257 (7%) Query: 15 TENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMAL---- 70 T + +K+AD++ AN +E Q +S +A+ G+S+++I +F +KLG G+ + ++A+ Sbjct: 68 TRSGKKLADYIFANTTETQYLSISALAENSGVSEATITRFCRKLGLSGYNDFKLAIAKSD 127 Query: 71 ----IGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQ 126 +GE S S S+ITS DSL I +KL L+L +T LLD + Sbjct: 128 HVTDMGEPSGSP-----------STITSQDSLPDIFQKLLSANILSLTETFDLLDEKEIS 176 Query: 127 KIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQ 186 + ++++ A + G G S+++ + + R AD+H+Q DV Sbjct: 177 RAVDLLYGAHHVYCLGNGSSSVMAMEAWARFSTASTRFIHIADSHMQMLSIALATPQDVI 236 Query: 187 IAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMS 246 + SYSG+ +++ A K+ VI +T S A TL E+ +S S++ Sbjct: 237 LFFSYSGATRDMEDIMNIAHKRKIPVILVTHFPKSQAAAFADVTLLCGYNESPLQSGSIA 296 Query: 247 TRTAQNSVTDLLFVGLV 263 R Q + D LF G Sbjct: 297 ARMGQMLIIDCLFHGFC 313 >UniRef50_UPI00019054B9 hypothetical protein RetlB5_21050 n=1 Tax=Rhizobium etli Brasil 5 RepID=UPI00019054B9 Length = 259 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 77/261 (29%), Positives = 135/261 (51%), Gaps = 14/261 (5%) Query: 19 QKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASR 78 +K+A F+ A+ + S ++A++ S++S+++F ++LG QGF ++AL E + + Sbjct: 6 EKVAAFVLADPQTVLYKSITELAEEAESSEASVIRFCRELGYQGFQNFKLALAHELATLQ 65 Query: 79 EKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPFI 138 + T +S D + ++L ALE+T LLD +Q++ ++ A I Sbjct: 66 QPT--------ASAPGD-----MVQELVETARTALEETERLLDRDAIQRVSSLLLDARHI 112 Query: 139 QITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEI 198 +I G+ SA+ + L +KL ++G + D+H+ S D+ I IS SGS + Sbjct: 113 EIFGVAASAITAQYLEYKLARLGIQAHIPRDSHLATMASATASADDLYILISSSGSTIDT 172 Query: 199 VLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDLL 258 + AE+A +GA VIAIT+ T SPL + F L S ET + ++ +Q + D L Sbjct: 173 LRVAESAHARGAKVIAITNRTKSPLAAICDFKLLASSPETPLTGGAFPSKISQLLIVDAL 232 Query: 259 FVGLVQLNDVESLKMIQRSSE 279 + +L D LK I+ ++E Sbjct: 233 ANTITKL-DPARLKTIKETAE 252 >UniRef50_A0AJB4 Complete genome n=7 Tax=Bacillales RepID=A0AJB4_LISW6 Length = 283 Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 78/283 (27%), Positives = 134/283 (47%), Gaps = 8/283 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 + +I + +E+KI + AN + S ++A++ S +++V+F + +G Q F Sbjct: 7 INRIEGILHDLPTSEKKIGQTVLANPEFTTTASIHKLAQKADASGAAVVRFCKSIGLQSF 66 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 EL+ L + A +K + I ++ I KL + T + LD Sbjct: 67 PELKRQLSLDL-AQPQKIG------YYDIEPNEDFHTITDKLVSNMMQTMNDTASQLDET 119 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 ++ +++ A I G+G S LV D+S K ++ G V D HV A K+ Sbjct: 120 KVLTACDLLGDADTIYTYGVGASWLVAEDISQKWLRAGKHVLATQDAHVLAMAFATGKRK 179 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTV-SGETEWRS 242 V IAIS SG E++ + A+ TVI++T ++ L+ A L+T + E E RS Sbjct: 180 SVFIAISNSGETSEVLQLVDQAKLNDVTVISLTRFGNNKLKEKADLALETSRAPEAEIRS 239 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 ++ S+R AQ V D+LF + E ++ I++S E T R + Sbjct: 240 TATSSRQAQLLVVDILFYYYASHHYDEMIQQIKQSREATNRFR 282 >UniRef50_D0BLW5 Transcriptional regulator, RpiR family n=3 Tax=Granulicatella RepID=D0BLW5_9LACT Length = 268 Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 77/272 (28%), Positives = 147/272 (54%), Gaps = 12/272 (4%) Query: 15 TENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEY 74 T+ ++KIA++++ N+S + S S +A +G+S SSI K+ +K+G ++ ++ L Sbjct: 6 TDTDKKIANYIEQNISTVLSSSIHDLANLIGVSSSSISKYIKKIGYASYSRFKVVL---- 61 Query: 75 SASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISK 134 + NA + + + S+D+++ I KL + E T LL+ L+ I++ I Sbjct: 62 ----AQQNAQPID--AQLDSNDTIKTIQSKLFHTITRSYEMTLELLNDELLETIVQQIHS 115 Query: 135 APFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQ-ATVSQALKKGDVQIAISYSG 193 A I + G+G S +V DL FKL +IG + D+H+Q A++S A + D I ISYS Sbjct: 116 ARRIYMFGVGASGMVCNDLYFKLSRIGKNIIYHTDSHIQLASLSGATNQ-DFIIGISYSS 174 Query: 194 SKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNS 253 + KE++ + A++ ++IT + + L L+ + L E RSS++++R Sbjct: 175 NTKEVITAFKIAKELSIPTLSITGIGNQQLDSLSTYQLKIPRHENTIRSSAITSRNDSFF 234 Query: 254 VTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + D+L++ L+Q + + +++S +T L+ Sbjct: 235 LIDILYLALLQKEEHRHFQNLEKSYRMTHPLR 266 >UniRef50_C0D858 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D858_9CLOT Length = 275 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 75/248 (30%), Positives = 124/248 (50%), Gaps = 15/248 (6%) Query: 18 EQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSAS 77 E++ A++L + + ++ +AK+ +S++++V+ K+G G EL++ + + Sbjct: 24 ERRFAEYLLNSFAGIEKEPIAVLAKEAQVSEATVVRVCHKMGYSGLKELKIVV------A 77 Query: 78 REKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPF 137 RE N TA I ++ + ++ AL+ T L+D ++K +V+ A + Sbjct: 78 RE--NETAGSFDGGI-GGQYMDELKERVFMGAIRALQDTMNLIDEDEVEKATKVLCNANY 134 Query: 138 IQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK--KGDVQIAISYSGSK 195 I I G+GGS V R L +LMK+G + Q T+ A K KGDV I IS+SG Sbjct: 135 ISIYGVGGSVPVARSLKHQLMKLG--IPSNVYNEFQPTIIAAEKYNKGDVAIGISHSGES 192 Query: 196 KEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMS-TRTAQNSV 254 ++V AR +GAT I ITS DS + + T S ET S R AQ S+ Sbjct: 193 SQVVEALRIARGKGATTICITSYGDSAITHCSDVKFFTTS-ETLLNGGDNSLARIAQTSI 251 Query: 255 TDLLFVGL 262 +LL++ + Sbjct: 252 INLLYLNV 259 >UniRef50_C2L0R5 Possible transcriptional regulator RpiR n=1 Tax=Oribacterium sinus F0268 RepID=C2L0R5_9FIRM Length = 314 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 73/288 (25%), Positives = 136/288 (47%), Gaps = 27/288 (9%) Query: 2 LYLTKISNAGSE-----------------FTENEQKIADFLQANVSELQSVSSRQMAKQL 44 +Y TK+ GSE E QKIAD+L + + ++A++ Sbjct: 10 IYETKVHTKGSERFVQQSVIPEIKSLYPQMNEAMQKIADYLIDTEDKKCVERASELARRS 69 Query: 45 GISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNATALHLHSSITSDDS--LEVIA 102 G+S +S+ +F + +G + F + R+ ++ E + + IT D + I Sbjct: 70 GVSTASVSRFVKMMGYKEFRDFRLKIVMEKQEENRQEENELNYNGEPITGDAHSICKTIF 129 Query: 103 RKLNREKELALEQTCALLDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGY 162 K RE LE+T +LD+ +Q + ++I +A I + G+G S + L +L +IGY Sbjct: 130 SKSVRE----LEETWGILDFDTMQTVADLIHEARRIVVIGVGRSKVTMEALYSRLYRIGY 185 Query: 163 RVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSP 222 + +D H ++ ++K D+ I +S G K +V A A+K+G V+ I+S+ +SP Sbjct: 186 PIMMFSDAHEIVNITSIMEKKDILICVSNFGQSKSVVEGARRAKKRGIQVVGISSIKESP 245 Query: 223 LRRLAHFTLDTVSGETEWRSSSM----STRTAQNSVTDLLFVGLVQLN 266 L +++ +TL + + ++ S AQ + D L++ + N Sbjct: 246 LAKISDYTLFSAYDYNNAQDGNLFDPSSENLAQLVIVDCLYMLVAHKN 293 >UniRef50_Q1J2N3 Transcriptional regulator, RpiR family n=2 Tax=Deinococcus RepID=Q1J2N3_DEIGD Length = 290 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/245 (26%), Positives = 124/245 (50%), Gaps = 12/245 (4%) Query: 20 KIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASRE 79 ++ D + + S++ ++++ G S +++V+ Q LG G+ E ++ L + SR Sbjct: 28 RVIDQILMDPERFLSLTIAELSEAAGTSDATVVRLVQHLGFGGYQEFKLQLSRALAVSR- 86 Query: 80 KTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPFIQ 139 K + T + D+ I RK+ AL+ T L+ ++ ++ A I+ Sbjct: 87 KADLT-------VEPQDASVTILRKIFDSSNTALDDTLEHLNLEAFSAAVQAMTLARHIE 139 Query: 140 ITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQA--LKKGDVQIAISYSGSKKE 197 + G+G S +V ++ +++G ++C A T +S L+ DV IA+S+SG++ + Sbjct: 140 LIGMGASGVVALSGQYRGLRLG--LSCRASTDPGTFLSTCSLLEPTDVLIAVSFSGTRPQ 197 Query: 198 IVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDL 257 +V A AR+ GA V+A+T L +PL ++ H TL + +R ++T+ Q ++ D Sbjct: 198 VVQAARLARQAGAIVVALTGLGRTPLSKVVHHTLTVSAPGDRYRPEGLATQIPQVAILDA 257 Query: 258 LFVGL 262 LF L Sbjct: 258 LFTSL 262 >UniRef50_P46117 Uncharacterized HTH-type transcriptional regulator in aarA 3'region n=5 Tax=Enterobacteriaceae RepID=YARA_PROST Length = 282 Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 66/262 (25%), Positives = 133/262 (50%), Gaps = 6/262 (2%) Query: 18 EQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSAS 77 EQ++A FL + +++ ++A+ G+S +S+++F +++G +G+++ ++ +Y + Sbjct: 21 EQRLARFLLDSRDNFVAMNVAELAQAAGVSSASVIRFTRQMGYRGYSDFKV----DYLSD 76 Query: 78 REKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPF 137 ++ A +L S+ D E I K + A+E++ LLD + +I + I +A Sbjct: 77 EKQYKAESLS--GSLNPYDDTEQIIAKSGQMFITAIEKSLELLDPNTMDEIAQKIVEAKR 134 Query: 138 IQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKE 197 I + G+G SA+V D+ +KL+++ D HVQ + S + D+ IAI+ G+ + Sbjct: 135 IVLFGVGTSAIVAYDIFYKLIRVNKYALFSPDLHVQLSYSSNVDADDLVIAITAKGNTPD 194 Query: 198 IVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDL 257 I + A K+G + I +T RLA L E +++ ++ + Q V D Sbjct: 195 INHMLKLANKKGCSTIVLTRFGQDEAVRLADLVLPYFYDEQLFQTGVITPQVLQMVVFDT 254 Query: 258 LFVGLVQLNDVESLKMIQRSSE 279 LF + L + + + +Q+ E Sbjct: 255 LFFKYLTLTNEDVVLALQKERE 276 >UniRef50_C0C5Q9 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C5Q9_9CLOT Length = 287 Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 81/285 (28%), Positives = 134/285 (47%), Gaps = 12/285 (4%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGI-SQSSIVKFAQKLGAQG 62 L KIS + T+ ++++AD++ N SE+ + S + + S++S+VKF + LG G Sbjct: 11 LAKISELYPQLTKGQKQLADYILKNPSEVVNKSITDLISHTSLKSEASVVKFYRLLGFDG 70 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARK--LNREKELALEQTCALL 120 F ++ L ++E N T H S IT DD I +K L L+ A Sbjct: 71 FKSFKIKL------AQELVNRTFYHSESDITIDDEPTEIKKKVFLGAMSSLSKNADIAAG 124 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + QK++ S A I I G G SA + + F+L ++G C D H+ A + Sbjct: 125 ECMDAQKLL---SSAKRIIILGHGASASICQYAFFRLTELGLNCVCNQDAHMNAAILTHP 181 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + GDV + +S SG ++ E A ++ I IT S + RL+ L TVS E Sbjct: 182 RPGDVILCVSQSGETADLYKQIEMAYQRRIPAILITGAPGSSIARLSQVILSTVSEERNI 241 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + ++++R +Q + D LF + N E L +Q + ++ K Sbjct: 242 LTDALNSRVSQFCLIDALFSMISIANANEMLPRLQDTRNTFKKYK 286 >UniRef50_C2HLD1 Transcriptional regulator n=3 Tax=Lactobacillus RepID=C2HLD1_LACAC Length = 284 Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 73/271 (26%), Positives = 133/271 (49%), Gaps = 8/271 (2%) Query: 12 SEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALI 71 S+ + EQ + D++ AN + S S ++++K GIS ++IV+F +++G GF++L++ L+ Sbjct: 13 SQLPKKEQLLGDYIIANPENVISSSIQKLSKDTGISTATIVRFCREIGTNGFSDLKLQLV 72 Query: 72 GEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEV 131 A++ N H + + + I + E A+E T + L+ ++K + Sbjct: 73 ----AAQSSVNNNDYH---EFDAGEGIAAIKNTMAARFESAIEATQSGLNDNSVEKAVRK 125 Query: 132 ISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISY 191 I + I + G G S +V D+ K M++G + +D HV + D+ I IS Sbjct: 126 IYNSSSILVYGAGASGIVASDMYQKFMRVGKNINYISDLHVALAQLASFTSDDLLILISN 185 Query: 192 SGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVS-GETEWRSSSMSTRTA 250 G E+ + A K G + +T+ S + + A L T GE RS + ++ + Sbjct: 186 DGKTTEVSDIQKVADKFGIPTLLLTANPRSFVAKKADLVLLTQDIGEPSIRSGATTSLIS 245 Query: 251 QNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 Q V D+L V ++ E LK ++RS+E T Sbjct: 246 QMFVVDVLVFSYVSVHSDEVLKKLKRSNEAT 276 >UniRef50_B9DVM9 RpiR family regulatory protein n=2 Tax=Streptococcus RepID=B9DVM9_STRU0 Length = 295 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 80/270 (29%), Positives = 137/270 (50%), Gaps = 5/270 (1%) Query: 12 SEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALI 71 S F+ +EQK+ DF+ + S+ Q+AK+ S+S++V+ AQKLG G+T R A Sbjct: 10 SAFSPSEQKVVDFILKEKEHISEWSTSQIAKETYTSKSTLVRIAQKLGFSGWTSFRQAFH 69 Query: 72 GEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEV 131 E + ++ +A +L T D++LE IA KL K+ +++T L L K I + Sbjct: 70 EEVTYLLKQADAHDANLPFDKT-DNNLE-IASKLAHLKKEVIDETLHLSRNKDLNKAIHL 127 Query: 132 ISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD-VQIAIS 190 IS A + + + GR+ + + +I V D H + L + D I IS Sbjct: 128 ISHARTVHLFAASNNLHNGREFAHNMKRIQKDVQLH-DLHGEIHFDALLAEEDSCAIIIS 186 Query: 191 YSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW-RSSSMSTRT 249 YSG ++ A+ RK+ +IA+TSL D+P+ +L+ TL + E + + + +T T Sbjct: 187 YSGGTLSLIKVAQILRKKEIPIIALTSLGDNPISQLSQVTLRLSTKEKLYSKIGTYATDT 246 Query: 250 AQNSVTDLLFVGLVQLNDVESLKMIQRSSE 279 + + DLL+ + N +L Q++S+ Sbjct: 247 SITFILDLLYSIYFRQNYDYNLAFRQKTSQ 276 >UniRef50_B7CB00 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CB00_9FIRM Length = 291 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 71/276 (25%), Positives = 134/276 (48%), Gaps = 6/276 (2%) Query: 13 EFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIG 72 EFT+ E+ IAD+L N E++++S +A+ S S+I +F KLG G+ + ++ Sbjct: 11 EFTDVEKSIADYLLKNGYEVKNMSISSLAQVTYSSTSTITRFCHKLGLDGYKKFQILFNS 70 Query: 73 EYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVI 132 EY A +K ++++ T +DS E IA++L R + + +T + +Y +L +I+ + Sbjct: 71 EYEAYEKK---GLVNVNYPFTGEDSYEQIAKQLERLNQETIAKTISCFNYNQLNRIVRRM 127 Query: 133 SKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYS 192 KA I I +G S V + K+++ G V + A + V + IS S Sbjct: 128 DKADMINIFSVGTSVTVAMEFQQKMLRFGKIVNLTQQACFLPGYALAGTENTVNLVISLS 187 Query: 193 GSKKEIVLCAEAARKQGATVIAITSLTDSPL-RRLAHFTLDTV--SGETEWRSSSMSTRT 249 G +++V ++QG + +TS +S + R L + + E + + + + Sbjct: 188 GENRDVVESLNLLKEQGRYTVGMTSTPNSTVARECKEVILVDIEENNSYEAKIDTFAIYS 247 Query: 250 AQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 A + V D LF L + N + K+ + + + +R K Sbjct: 248 AFHFVLDCLFSFLYKYNFDSNTKITKEKAYMIERNK 283 >UniRef50_A9NEV7 Transcriptional regulator, RpiR family n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NEV7_ACHLI Length = 281 Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 73/242 (30%), Positives = 122/242 (50%), Gaps = 5/242 (2%) Query: 18 EQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSAS 77 E+ + D+L N + L+ S ++A+ S +S+V+ +KLG GF + ++ I + S Sbjct: 18 ERIVLDYLIENKTLLKDFSVEKIAEAAYTSPASVVRMCKKLGYNGFKDFKIDFI--LANS 75 Query: 78 REKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPF 137 + + T+ + + D + +K ALE+T L D K +I A Sbjct: 76 KVEIPETSEYTDVILIKDQNN---GKKAIENNIRALEETINLYDEKTYTKAASLIMNARK 132 Query: 138 IQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKE 197 I I G G S LV +DL KL +I + ++H Q + + DV I IS SG KE Sbjct: 133 ILIFGKGSSFLVCKDLEMKLRRINKFCVAQGESHDQFVDASFINNKDVVIFISNSGKTKE 192 Query: 198 IVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDL 257 I+ A A++ +I+IT + S L ++ L T + E+E+RS++M++R +Q SV D Sbjct: 193 IISSALLAKENKTPIISITRIGSSILADISDVVLYTSALESEFRSAAMTSRISQMSVVDA 252 Query: 258 LF 259 L+ Sbjct: 253 LY 254 >UniRef50_A6LRG7 Transcriptional regulator, RpiR family n=2 Tax=Firmicutes RepID=A6LRG7_CLOB8 Length = 291 Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 63/247 (25%), Positives = 132/247 (53%), Gaps = 7/247 (2%) Query: 16 ENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYS 75 E E+KIAD++ N + ++ ++A + +S+++IV+F +K +GF +L++ + Sbjct: 29 EAEKKIADYIINNKERVIEMTVSELALESSVSEATIVRFCKKCDLKGFYDLKIKI----- 83 Query: 76 ASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKA 135 ++E N + ++ + + S++ ++ + L + E L+QT ++++ +++I+E I A Sbjct: 84 -AKEMVNLKSSNISNELDSNNIMQSLQNILANKIE-ELKQTISMMNEGNIKRILEAIKGA 141 Query: 136 PFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSK 195 +Q +G + V D ++K ++G Q S L K DV I IS SG+ Sbjct: 142 RIVQFAAVGNTIPVAMDGAYKFNQLGISSVTNTIWETQLAFSYTLTKEDVVIVISNSGAS 201 Query: 196 KEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVT 255 KE+V E A ++ AT I+IT+ +SP+ + + ++T + E + +R + V Sbjct: 202 KELVALLEIANERQATTISITNHENSPVANKSKYHINTSTREKLFLDEFSFSRVSAMVVI 261 Query: 256 DLLFVGL 262 ++L++ L Sbjct: 262 EILYLLL 268 >UniRef50_D1AG49 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AG49_SEBTE Length = 283 Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 65/252 (25%), Positives = 129/252 (51%), Gaps = 2/252 (0%) Query: 14 FTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGE 73 FT NE A ++ ++ E+ +S ++AK+ S ++I++ +K+G G+ E ++ L E Sbjct: 13 FTPNEIGAAKYIISHSDEVIRLSCTELAKKTYTSPATIIRLCKKIGIGGYQEFKVILATE 72 Query: 74 YSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVIS 133 + + N+ ++ ++ I DS+ I K++ +L++T L D ++ +I++I+ Sbjct: 73 INFFIK--NSMEINKNNEIDKKDSISDIIDKISSLSIDSLKETKILTDKNVVKSVIDMIN 130 Query: 134 KAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSG 193 A + + G G S V D ++K M+IG A A Q ++ + I SYSG Sbjct: 131 NAEILDLYGSGASHFVALDANYKFMRIGKVTATYALYDQQYVQAKNSNENHAAIIFSYSG 190 Query: 194 SKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNS 253 E++ A+ + A +I IT +D+ L + A +L + E +RS+++ +R + + Sbjct: 191 ETAEMIEIAKILTENKAKIITITKNSDNTLEKFADKSLYVTAKENLYRSAAIYSRISMLN 250 Query: 254 VTDLLFVGLVQL 265 V D+L+ L Sbjct: 251 VIDILYTAYFNL 262 >UniRef50_B7GUA9 Transcriptional regulator, RpiR family n=7 Tax=Bifidobacterium RepID=B7GUA9_BIFLI Length = 289 Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 124/258 (48%), Gaps = 3/258 (1%) Query: 6 KISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTE 65 +I + E+ +A +++ ++ E ++ QMA +SQ ++++FA+KLG G+ E Sbjct: 10 RIDHVYPSLRPAERAVAQYIRDHIEEAADLTVGQMADIAHVSQPTVIRFARKLGFGGYRE 69 Query: 66 LRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARL 125 LR L + A+ K L D E+ ++ + K L +++ + LD Sbjct: 70 LRYVL--RHPAAEHKVTFNPLDGFDLNPWDGEDEIPSKAADGAKAL-IDELHSALDPKAY 126 Query: 126 QKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDV 185 +K + +++++ FI I G+ S DL KL +G D ++Q + L G V Sbjct: 127 RKAVALLAESEFIDIFGVENSLTPAMDLFTKLGYLGLTCRLNTDAYLQQIGAGHLTHGAV 186 Query: 186 QIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSM 245 +A S+SGS + V A+ GA IAIT+ +PL A TL T +++ Sbjct: 187 AVAFSHSGSSADTVKALRLAKSHGAKTIAITNAIGAPLASWADVTLLTGRDSHTIYGNAI 246 Query: 246 STRTAQNSVTDLLFVGLV 263 + A ++ D+L++G++ Sbjct: 247 FSCVADTALVDMLYMGVI 264 >UniRef50_Q5WK55 RpiR family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WK55_BACSK Length = 268 Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 66/247 (26%), Positives = 126/247 (51%), Gaps = 18/247 (7%) Query: 18 EQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSAS 77 E++IAD++ + EL ++ + +A + +S ++I +F +K+GA F E +M++ Sbjct: 19 EKRIADYVMSAPEELANIHIKDLAAKCSVSVATITRFCRKVGAANFVEFKMSV------- 71 Query: 78 REKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPF 137 R+ T ++ E+IA + K + + + L++ + + ++ A Sbjct: 72 RDSIR----------TEEEGGELIAEMESIYKAI-IGGSRELINQDDIVQAATLLENANR 120 Query: 138 IQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKE 197 I+I G+G S L G+++ F+LM++G RV C D+H + L DV +AIS SG + Sbjct: 121 IEIYGIGSSGLSGQEMKFRLMRMGMRVDCHIDSHTMVMNASLLTAADVVLAISNSGHTVD 180 Query: 198 IVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDL 257 I A++ GATVI +T+ +PL +A L + S + + ++ + + V DL Sbjct: 181 IQEAVALAKENGATVILLTNHEHTPLSEMADLLLLSFSPKPFYARGFLNAQLSIVHVLDL 240 Query: 258 LFVGLVQ 264 + + L Q Sbjct: 241 ISLVLAQ 247 >UniRef50_B9DT48 RpiR family regulatory protein n=1 Tax=Streptococcus uberis 0140J RepID=B9DT48_STRU0 Length = 265 Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 68/251 (27%), Positives = 126/251 (50%), Gaps = 2/251 (0%) Query: 14 FTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGE 73 FT EQ I D+LQ++ EL+S++ Q+AK S +SI++ QK G QGF + R+AL+ E Sbjct: 13 FTPTEQLIIDYLQSHQEELESLTIGQLAKGTFSSNASIIRLCQKCGYQGFRDFRLALVSE 72 Query: 74 YSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVIS 133 ++SR I + S E++ + K +++Q +LLD +L+++ E I+ Sbjct: 73 LTSSRYLGKIVDFSRPFQI-KESSQEMVNSLFSLYKS-SIDQVQSLLDIPQLEEMAEQIA 130 Query: 134 KAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSG 193 ++ + + G G L + S KL+KI Y + + + + GDV + +SY G Sbjct: 131 QSNRLFLFGYGDVKLTLKSFSNKLVKINYFPIMATENEEEHEIVPHITNGDVALFVSYRG 190 Query: 194 SKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNS 253 +++ + R+QG IT+ SPL + L E E + + ++ + + Sbjct: 191 KNEKMAQHIVSLRRQGVATFVITANQKSPLLPYSKGYLLIPDLEKEDKIGTFYSQLSFDY 250 Query: 254 VTDLLFVGLVQ 264 + +L++ L + Sbjct: 251 LLNLIYTFLYK 261 >UniRef50_C4F999 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F999_9ACTN Length = 288 Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 66/227 (29%), Positives = 116/227 (51%), Gaps = 10/227 (4%) Query: 13 EFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIG 72 +F ++EQ I DF+ AN ++S Q+A+ S++S+ +F +KLG + + + +L Sbjct: 19 QFLDSEQHIVDFILANTERAPQMTSAQLARASSTSEASVSRFCKKLGFKNYRSFQFSLAR 78 Query: 73 EYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVI 132 + +A T +T DD + +A + K+ +E T LD L++++++ Sbjct: 79 DLAAREGDERVTG-----EVTLDDIEQSLA-NIKHAKQREIEATLDALDPDTLRRVVDLF 132 Query: 133 SKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG--DVQIAIS 190 +A + +G + V D + K ++G R C A+T +++ S AL G DV + +S Sbjct: 133 RRAGLVMFAAVGNTNAVAIDAAIKFGQLGIR--CVANTITESSTSLALTMGKDDVLVLVS 190 Query: 191 YSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGE 237 SG + + AA+ GATVI I ++PL RLA L TV+ E Sbjct: 191 NSGKSQRLERILRAAKHGGATVILICGNENAPLARLADIVLRTVNYE 237 >UniRef50_A6UCC0 Transcriptional regulator, RpiR family n=4 Tax=Proteobacteria RepID=A6UCC0_SINMW Length = 296 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 65/247 (26%), Positives = 116/247 (46%), Gaps = 8/247 (3%) Query: 12 SEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALI 71 ++ ++++K+A+ + A+ + + + + A+ G+SQ ++++F +G QG+ + ++ L Sbjct: 26 ADLRKSDRKVAELVLADPKRVINATIAEAAEWAGVSQPTVIRFCASIGCQGYQDFKLRLA 85 Query: 72 GEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEV 131 + T HS I + D+ ++ K+ +L+ LD ++ + I+ Sbjct: 86 QSLALGMSAT-------HSVIDASDTPAQVSAKIFDYTITSLDWVRNHLDPVQVSRAIDA 138 Query: 132 ISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISY 191 +SKA I+ G G S +V RD K G E D H Q V LK GDV + IS Sbjct: 139 LSKASRIEFFGFGASGIVARDAQQKFPLFGVPCGAETDAHQQIMVVSMLKPGDVAVVISN 198 Query: 192 SGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQ 251 +G+ I+ A AR+ G VI I +D PL L + E + +R A Sbjct: 199 TGATLAIIETARRARESGCQVIGIVG-SDGPLVEFCDIVLMVETLENTNIYTPTISRIAA 257 Query: 252 NSVTDLL 258 +V D+L Sbjct: 258 LTVIDIL 264 >UniRef50_C3RHU4 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RHU4_9MOLU Length = 285 Score = 93.6 bits (231), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 68/252 (26%), Positives = 128/252 (50%), Gaps = 5/252 (1%) Query: 14 FTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGE 73 F++ E+ IA+++ + E+ ++ ++A+ S ++I +F +KLG + + ++ Sbjct: 13 FSDIEKGIANYIIDHKEEVANMRLVELAEATFTSTATISRFCKKLGEKNYNSFKI----N 68 Query: 74 YSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVIS 133 +++S + T + + +DS++ + +L + +E T ALLDY L ++IE + Sbjct: 69 FASSVLTSYQTDVDYNRPFKENDSIQEVTNQLGELYKDTIEATKALLDYDVLNQVIEKLL 128 Query: 134 KAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSG 193 K I I +G S L G +++ I + V ++ + Q S + K V I ISYSG Sbjct: 129 KTSVIDIFAVGASYLSGLLFEHRMISIDHFVNFKSSPNDQDKRSLFVNKNTVAIVISYSG 188 Query: 194 SKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGET-EWRSSSMSTRTAQN 252 EI + T+IAITS+ DS LR+ A++ L S E + + S++ + + Sbjct: 189 ESHEIKTIVDRIVDNKGTIIAITSINDSYLRKRANYCLTMCSKENIVSKIETYSSKLSSD 248 Query: 253 SVTDLLFVGLVQ 264 + DL+F L Q Sbjct: 249 YLMDLIFSILFQ 260 >UniRef50_C8QBF9 Transcriptional regulator, RpiR family n=1 Tax=Pantoea sp. At-9b RepID=C8QBF9_9ENTR Length = 297 Score = 93.2 bits (230), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 67/251 (26%), Positives = 116/251 (46%), Gaps = 8/251 (3%) Query: 12 SEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALI 71 E E+ IA F+ N L S+S +A L +S +SI K A+KLG GF +L+M + Sbjct: 23 PELGRKERSIARFIDDNPETLASMSITDIADYLDVSVASITKVAKKLGFTGFHDLKMNIG 82 Query: 72 GEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEV 131 + S E + + T E I LAL+ +D A ++ + + Sbjct: 83 KHITVSEELIDVPPVSGGEFYT-----EKIVESTLYNSILALQDALKAIDIAVVKSVAAL 137 Query: 132 I---SKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIA 188 S+ I I G GGS + D + KL+KIG + +D+H Q + ++ GD+ + Sbjct: 138 FIHRSENARIVIAGCGGSGSICEDFNHKLLKIGIFSSVFSDSHKQLMTASLMRPGDILLT 197 Query: 189 ISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTR 248 +S+SG +I+ + A +GA I +T+ +SPL ++ + + + +TR Sbjct: 198 VSHSGQTTDIINMTKMANDKGAETICLTNYPNSPLSHISRHAIISSVKNNPITGENATTR 257 Query: 249 TAQNSVTDLLF 259 ++ D +F Sbjct: 258 IVHLNILDAIF 268 >UniRef50_C0X148 RpiR family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X148_ENTFA Length = 295 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 69/261 (26%), Positives = 128/261 (49%), Gaps = 3/261 (1%) Query: 18 EQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSAS 77 E+KI+D+ + S L ++ +A ++G+SQSS+ +F +K+G GF E ++ + + Sbjct: 21 EKKISDYFVHSESLLTQMTLESLANEIGVSQSSVYQFVKKIGYSGFQEFKIDIARNSNYQ 80 Query: 78 REKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPF 137 N +++ I+ DD IA+K+ + +L L L ++ ++ A Sbjct: 81 PTFQNVNSVNGADDISPDDDSITIAKKVLQANIYSLSNATQFLTKELLDNVLALMYSAKT 140 Query: 138 IQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKE 197 + G GGS++V D K ++ YR D H+Q + L D S+SG KE Sbjct: 141 LHFFGQGGSSIVAFDSFHKFIRTNYRCNYIFDYHMQLSFVTKLTSEDCVFIFSHSGKTKE 200 Query: 198 IVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDL 257 + A +K A +I +T + S L L+ + V+ E +R+ S+++R + +V D+ Sbjct: 201 SINLARQVKKTNAKMITLTGNSGSELAGLSDEAIIVVTEEGLFRAESLASRISYLTVMDI 260 Query: 258 LFVGLVQLN---DVESLKMIQ 275 L+ + N + +SLK I+ Sbjct: 261 LYTNTMYHNFDQNADSLKKIR 281 >UniRef50_C6JFN2 Transcriptional regulator n=3 Tax=Clostridiales RepID=C6JFN2_9FIRM Length = 275 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 72/253 (28%), Positives = 121/253 (47%), Gaps = 17/253 (6%) Query: 14 FTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGE 73 FT E+ IADF N E Q SS+ ++ L +S++S+ +FAQK G G+ E I E Sbjct: 19 FTPLERTIADFFIHNTEE-QDFSSKNISGLLYVSEASLSRFAQKCGFHGYREF----IYE 73 Query: 74 YSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVIS 133 Y S + + EV + N +EL L ++ ALLD A++ +I ++ Sbjct: 74 YKQSLAPGPEENI---------PNFEV--SEFNTYQEL-LNKSNALLDKAQITRITNLLV 121 Query: 134 KAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSG 193 P + + G G S LV +++ + M+IG + D+H+ S L + + I IS SG Sbjct: 122 SKPRVYVYGRGSSGLVAQEMKLRFMRIGLNIEAVTDSHIMKVNSVILDENCLVIGISVSG 181 Query: 194 SKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNS 253 +I+ +AA + GA + +T+ D + TL S E + +S + Sbjct: 182 QTDDIISSLKAAHQHGAYTLLMTARQDKSYQDFCDETLIFASMEHLEYGNIISPQFPILL 241 Query: 254 VTDLLFVGLVQLN 266 V D+L+ +Q++ Sbjct: 242 VLDVLYAHYLQID 254 >UniRef50_D2ELR8 Transcription regulator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2ELR8_PEDAC Length = 280 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 76/280 (27%), Positives = 140/280 (50%), Gaps = 20/280 (7%) Query: 7 ISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTEL 66 + N +FT+ E+++A F+ + +++Q+A Q+G S +++++ A+++ G EL Sbjct: 10 LKNQLGDFTKKEKQVARFIIKYPQAVIDSNAKQVADQVGTSAATVIRLAKRVCKNGLPEL 69 Query: 67 RMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQ 126 + L E + + I D+LEV+ +K+ +EQT + ++ Sbjct: 70 KERLKNETMVNDK--------FFEEIDPADTLEVMKQKMEYRINHTIEQTNRTVKGGAVR 121 Query: 127 KIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQ 186 +++ +A + G+G S LV DL K ++G VA D H+ A ++ K V Sbjct: 122 NAAKLVDQADVVYTYGIGASHLVADDLQQKFGRLGKPVAQTQDVHLLA--AEMSKGRGVV 179 Query: 187 IAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRR-----LAHFTLDTVSGE-TEW 240 + IS SG KE + AAR V+AIT + SPL R LAH + SGE + Sbjct: 180 VLISNSGETKETLQLLGAARALDLPVVAITRVLSSPLARQSTVVLAH----SDSGEGNQL 235 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSEL 280 RS++ ++ AQ V DLL+ ++L+ +++ + +S ++ Sbjct: 236 RSAATTSLMAQLYVVDLLYYSFLKLHFEDNVDQLTKSRKI 275 >UniRef50_B6ITC5 HTH-type transcriptional regulator hexR, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6ITC5_RHOCS Length = 280 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 72/275 (26%), Positives = 127/275 (46%), Gaps = 8/275 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L +I + +EQKIAD + + + S ++A +SQ ++V+F + +G G+ Sbjct: 2 LDRIRSMRPGLRRSEQKIADIVLRQPHAVVNASVAELAHDADVSQPTVVRFCRSIGCSGY 61 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 + ++ L + +A + ++ DD + IA KL AL + L+ Sbjct: 62 QDFKLRLAQDLAAGPARPE-------DAVRPDDPVAEIAAKLLNRSIGALTRLRNQLNPD 114 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L+ ++V+++ + G G S +V D K ++G V D+HVQA + L Sbjct: 115 ALEAAVQVLTETRRLDCYGFGASGVVALDAQNKFFRLGLPVVAHTDSHVQAMAAALLGPQ 174 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 V +A+S SG +E++ + A GA VIAIT+ SPL A L + E + Sbjct: 175 GVALAVSRSGRTRELLRSVDLALAGGARVIAITA-GGSPLAGRATVPLLVDAPEDSSPYT 233 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSS 278 M++R A +V D+L V V + ++R + Sbjct: 234 PMTSRIAHLAVVDILQVATALRRGVHTGDPLRRPA 268 >UniRef50_A6D304 DNA-binding transcriptional repressor RpiR n=1 Tax=Vibrio shilonii AK1 RepID=A6D304_9VIBR Length = 289 Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 68/219 (31%), Positives = 118/219 (53%), Gaps = 17/219 (7%) Query: 14 FTENEQKIA-DFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIG 72 T+ EQ IA +FLQ + + +S S ++A++L +S + IVK ++KLG GF +L+ +L Sbjct: 24 LTKTEQSIAENFLQPHFLQ-KSTSINEVAERLSVSPALIVKVSKKLGFSGFKQLKESL-- 80 Query: 73 EYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVI 132 Y+ S ++ A + L DDS E I K+ + AL + +D + + E + Sbjct: 81 -YAQSETQSYAPSERL----LPDDSAEKIVSKVLQNSINALTEILNFVDVSMVDAAAEAL 135 Query: 133 SKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYS 192 KA I++ +GGS+++ D KL++IG + + D H+ + + DV + +S+S Sbjct: 136 LKARNIELFAVGGSSIICEDFQHKLLRIGIKSSVPKDRHLMLMSASIMTDQDVVLVVSHS 195 Query: 193 GSKKEIVLCAEAARKQGATVIAIT--------SLTDSPL 223 G +++ A++ GATVI+IT SL+D PL Sbjct: 196 GQTVDLMDAVRQAKQSGATVISITNNYHAELSSLSDIPL 234 >UniRef50_C0Q155 Protein rpiR n=2 Tax=Salmonella enterica RepID=C0Q155_SALPC Length = 293 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 63/252 (25%), Positives = 123/252 (48%), Gaps = 8/252 (3%) Query: 11 GSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMAL 70 E + E+ IA F+ N L ++S +A L +S SSI K ++KLG GF +L++++ Sbjct: 18 APELGKKERAIARFIHDNPQTLSNMSITDIAHYLKVSVSSITKVSKKLGFTGFHDLKLSI 77 Query: 71 IGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIE 130 + + + + + S+ +E I LAL++ ++D + ++ + Sbjct: 78 SKNINNNEDTVDIPVIP-----DSEGFIEKIFESTLLNSILALQEALNVIDCSIIKSVAW 132 Query: 131 VI---SKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQI 187 + + I I G GGSA + D + KL+KIG +D+H Q + +++GD+ + Sbjct: 133 LFIHKNAEAKIFIAGCGGSASICDDFNHKLLKIGIFSTVFSDSHKQLMSASLMRQGDILL 192 Query: 188 AISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMST 247 A+S+SG +I+ A ++GA I +T+ +SPL + ++ + + +T Sbjct: 193 AVSHSGQTSDIIQMVNIANERGAETICLTNYPNSPLSLICRHSIISAVKNNPITGENATT 252 Query: 248 RTAQNSVTDLLF 259 R ++ D +F Sbjct: 253 RIVHLNILDAIF 264 >UniRef50_Q3JNN8 Transcriptional regulator, RpiR family n=54 Tax=Burkholderiaceae RepID=Q3JNN8_BURP1 Length = 339 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 18/281 (6%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L +I ++ +E+K+ADF+ A E+ +S ++A + G SQ +I +F Q LG GF Sbjct: 9 LPRIETIRAQLRPSERKLADFVLAAPREVLDLSMTELAARAGASQPTIARFCQALGCSGF 68 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 E ++ L + ++ + D+ I K+ AL + L Sbjct: 69 REFKIRLA-------QSVAPGVASVYRDVEPDERAPGIIGKVFDRTIGALIEVRNSLSAT 121 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 + + IE++++A I+ G GGS + +D+ K ++G +D H + + L Sbjct: 122 SVAEAIELLTRASRIEFYGAGGSGIAAQDIQHKFFRLGVPSVAYSDPHTFSMSAALLGAN 181 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 DV +AIS +G ++IV A AA GA VI+IT + SPL +L+ +L + E S Sbjct: 182 DVVVAISNTGRTRDIVDAARAALACGAKVISITH-SHSPLAQLSTVSLASNVAEETDVFS 240 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 M++R + ++ D+L VG+ ++R EL RL Sbjct: 241 PMTSRMSHLAIGDILAVGVA----------LRRGPELVDRL 271 >UniRef50_A8FIY5 Possible RpiR family transcriptional regulator n=4 Tax=Firmicutes RepID=A8FIY5_BACP2 Length = 286 Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 66/263 (25%), Positives = 141/263 (53%), Gaps = 13/263 (4%) Query: 15 TENEQKIADFLQANVSE--LQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIG 72 + ++KIA+++ N + L S+S+ +A + S+++I +F +K+G + + R+ + Sbjct: 21 SPTQKKIANYILENPQKVVLHSISA--LASECNTSETTIFRFLRKIGYESYQVFRVHVAQ 78 Query: 73 EYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVI 132 + + + ++ ++ I + DS+ I K+ +++ +++ + + IE + Sbjct: 79 DIATNTPQS------IYGEIEASDSVADIKHKVIELTTNSIQDMKHIVEDHAVTQFIEQM 132 Query: 133 SKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYS 192 +A G G S+ + D K +++G+ V+ +D H+ ++ + D +AIS+S Sbjct: 133 KQAHKTVFFGAGASSFIAGDAYHKFLQLGFDVSLCSDPHMMNMIATHATEHDFIVAISHS 192 Query: 193 GSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQN 252 G +EI+ + A+++GA + +ITS S L + + F L + S ET +RS SM +R Q Sbjct: 193 GESREILDAVQFAKEKGAKIASITSYPKSELAKRSDFHLLSSSRETTYRSDSMISRINQL 252 Query: 253 SVTDLLFVGLV-QL--NDVESLK 272 + D+L+V V +L N +E++K Sbjct: 253 VIIDVLYVAAVLELGSNAIENVK 275 >UniRef50_A5IV96 Transcriptional regulator, RpiR family n=113 Tax=Staphylococcus RepID=A5IV96_STAA9 Length = 290 Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 75/277 (27%), Positives = 137/277 (49%), Gaps = 12/277 (4%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 LT+I + T+NE+KIA F+ + ++ + S+ +A L IS SS+++F++K+ GF Sbjct: 5 LTEIDSQYPYMTKNEKKIAKFILNSPQKVIKMRSQDLASLLDISTSSVIRFSKKITDGGF 64 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 +L++ + S+ A++++ + + +++S E + KL+ AL L+ Sbjct: 65 HDLKINI------SKYVPKASSIY-NVELMNNESTESLRTKLHTRTTRALNHANNELNDK 117 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 + +I + ++ I I G G S +V DL KL +IG + +TH+ AT+ Sbjct: 118 TIDQICHCLKRSETIFIYGFGASFVVATDLYQKLSRIGLNIQLVQETHIFATLLATHNSN 177 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 D I I+ +G++ E+ + +I ITS D+P+ + ++ L G+T+ Sbjct: 178 DSVILITNNGTQSEMQSMVKVIDDYHIPIITITSTRDNPVAQASNIVL--TYGKTDENEM 235 Query: 244 SMSTRT---AQNSVTDLLFVGLVQLNDVESLKMIQRS 277 M T AQ D+L+ V LN SL I +S Sbjct: 236 HMGATTSLFAQMFTIDILYYRYVALNYHASLDFITQS 272 >UniRef50_D0DKU0 Transcriptional regulator n=1 Tax=Lactobacillus crispatus MV-3A-US RepID=D0DKU0_9LACO Length = 284 Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/274 (23%), Positives = 134/274 (48%), Gaps = 5/274 (1%) Query: 12 SEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALI 71 +E ++ + IAD + N L + +++++ S +S+++F ++L +G + ++ L Sbjct: 12 TELKKSSRIIADAVLENPKILLNKNAKEIGNYTNTSAASVIRFCKQLNYKGLKDFQIDL- 70 Query: 72 GEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEV 131 A + + +T DD + + KL E +D LQK + + Sbjct: 71 ----AQSTVKQSQLKPIDMIVTKDDKADEVMTKLRVSLSQNFEDLSKTIDIKDLQKAVSL 126 Query: 132 ISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISY 191 I K+ + I G+G S+ +DL +KL++ G V D H+ DV I SY Sbjct: 127 IKKSRAVYIAGIGASSFSAKDLFYKLIRSGKTVFYNDDVHIALERIYYSTPKDVMICFSY 186 Query: 192 SGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQ 251 SG +E++L + A+K ++A+T ++SPL +LA L E+ R ++++ AQ Sbjct: 187 SGLTQELLLAVKQAKKNKTPIVAVTRKSESPLSKLADINLKLPDHESLMRVGAINSTFAQ 246 Query: 252 NSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 ++++L++ + + E + ++ + +L ++LK Sbjct: 247 MFISNVLYLCSISSDLGEVKQEMEATGKLLEKLK 280 >UniRef50_A9MLD6 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- RepID=A9MLD6_SALAR Length = 293 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 71/253 (28%), Positives = 120/253 (47%), Gaps = 6/253 (2%) Query: 7 ISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTEL 66 ++N E + KIA ++ + +++A+++G+S+++IV+F +K+G G L Sbjct: 12 LANILGSLGETDAKIAGYILQQPGLVVQFPVKKLAQEIGVSEATIVRFCKKVGYGGLLNL 71 Query: 67 RMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQ 126 + L E A N +L I DDS +A+K+ E + +T LLD ++ Sbjct: 72 KADLKRELLAE----NDLSLPSSPDIFLDDSRNDVAQKIALTIETSARETIGLLDMKIVK 127 Query: 127 KIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQ 186 ++E A + G G S L + K+ ++G D LK+ D+ Sbjct: 128 PVVERFLSARRVMFVGFGASGLAALEARDKMNRLGIDSDAFTDRFTMTLKLANLKRDDLV 187 Query: 187 IAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGET-EWRSSSM 245 +A S+SG E+V A+K+GA +AIT SPL LA+ T SGE + S+ Sbjct: 188 VAFSHSGETPEVVNAFRLAQKKGAYTLAITHSPHSPLNELAN-TFWLTSGEAGPMQGDSI 246 Query: 246 STRTAQNSVTDLL 258 STR +Q + + L Sbjct: 247 STRISQLFIIEFL 259 >UniRef50_C0C246 Putative uncharacterized protein n=2 Tax=Clostridium hylemonae DSM 15053 RepID=C0C246_9CLOT Length = 292 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 71/268 (26%), Positives = 130/268 (48%), Gaps = 10/268 (3%) Query: 14 FTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGE 73 T E+++A+F+ A+ E+ +S +++A + +++IV+ + +G G+ EL+ L + Sbjct: 21 LTAAEKRVAEFVLASPKEVTRMSLKKLAVRCECGEATIVRLCKTIGVSGYAELKSLLETQ 80 Query: 74 YSASREKTNATALHLHSSITSDDSLEVIAR--KLNREKELALEQTCALLDYARLQKIIEV 131 K + L T E++AR +LN L L +T + + EV Sbjct: 81 LQLPAVKEESVRLS-----TGQGMGEIVARVFELNI---LNLRRTLEVAAVEEYENACEV 132 Query: 132 ISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISY 191 +S A I +G + S + +IGY ++D VQ + +K+GDV IAIS+ Sbjct: 133 LSTANKICFFAIGDAMFPCSYASLRFRRIGYDCYADSDADVQIVNACNMKEGDVAIAISH 192 Query: 192 SGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQ 251 SG K++V A+ +GA I IT S L + + L V+ +T ++ R A+ Sbjct: 193 SGRTKQVVEAMRIAKSRGAVTICITKAGKSELTKYSDIVLYNVTTDTTVDKEIIARRVAE 252 Query: 252 NSVTDLLFVGLVQLNDVESLKMIQRSSE 279 ++ D +++G++Q + S +Q SE Sbjct: 253 QAMLDAVYMGVLQKMEANSFARLQEVSE 280 >UniRef50_D1AYR1 Transcriptional regulator, RpiR family n=2 Tax=Fusobacteriaceae RepID=D1AYR1_STRM9 Length = 281 Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 72/258 (27%), Positives = 136/258 (52%), Gaps = 7/258 (2%) Query: 11 GSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMAL 70 ++FT +E+ IA FL N ++ + +R++AK+ S S++ + +K+G +GF E ++ L Sbjct: 10 NNDFTSSEKDIAKFLMNNYKNIKKIDARKIAKETFTSVSAVTRTCKKIGLRGFQEFKIDL 69 Query: 71 IGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIE 130 I E A+ E+ ++S I ++ +I KLN+ +L++T L D + K+++ Sbjct: 70 IEEL-ANLEQQKLE--FVNSDIERNNDTRMIIEKLNKLSISSLKETKLLQDPDIIDKVVK 126 Query: 131 VISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIA-- 188 +I K I G+G S +V D +K M+IG C A QA+ D +A Sbjct: 127 LIKKKKVIDFYGIGASHIVCLDAQYKFMRIGK--VCNAFGPFDLQYIQAVNSTDDNLAII 184 Query: 189 ISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTR 248 ISYSG ++I+ +E R +G ++IT + + A+ L S E+ RS+++ +R Sbjct: 185 ISYSGMTEDIIKISEVLRNKGIETVSITMYGSNKVASNANHNLYVTSKESLKRSAAIYSR 244 Query: 249 TAQNSVTDLLFVGLVQLN 266 + ++ D++++ +N Sbjct: 245 ISMLNLIDVIYLKYSNMN 262 >UniRef50_A8RZI5 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RZI5_9CLOT Length = 294 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 56/249 (22%), Positives = 125/249 (50%), Gaps = 5/249 (2%) Query: 13 EFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIG 72 +F ++ +A+++ N +++ + R +A + +S++++ +F + +G + + ++ Sbjct: 24 DFNPAQKAVANYILNNFYDMEGMPIRDLAVESEVSEATVSRFVKAMGYENYRAFQL---- 79 Query: 73 EYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVI 132 E + S+ + +L ++ +T +D+ I RK+ AL+ T ++DY L++ ++I Sbjct: 80 EVTKSKAERRKGSLKGYAEVTEEDNAPGICRKIFESNIQALQDTLTVIDYDALERAADLI 139 Query: 133 SKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYS 192 ++A + I G S + + +L ++G D H QA S + DV + IS Sbjct: 140 ARARRLCIFAQGRSKVTANSIRLRLHRLGIEGTLYTDPHEQAIASSLMGPEDVAVGISTF 199 Query: 193 GSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSG-ETEWRSSSMSTRTAQ 251 G + I++ A +G+++I +TS ++PL + A L TV+ E ++ S Q Sbjct: 200 GRSRSILVSIRRAAARGSSIIGVTSYQNTPLEKEADILLRTVNNDEADFGSEPSCASVTQ 259 Query: 252 NSVTDLLFV 260 + D L++ Sbjct: 260 MVMLDCLYM 268 >UniRef50_C4DDH7 Transcriptional regulator, RpiR family n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DDH7_9ACTO Length = 342 Score = 90.5 bits (223), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 75/281 (26%), Positives = 133/281 (47%), Gaps = 3/281 (1%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L ++ A +E++IA+ + + ++ ++A S +++V+F Q++G + Sbjct: 13 LVRVRAALPGLRPSERRIAEAILDDPHATAGLTVAELAAACDTSTTTVVRFYQRIGYGRY 72 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIAR-KLNREKELALEQTCALLDY 122 +LR+ L E A+RE+ L S D K+ + L++ T +LD Sbjct: 73 KDLRLDLTRE--ATREQLETANLPAASGDIDRDDTIDDIIAKVAANETLSIADTAEILDR 130 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 L + ++ + A + G+G S VG DL KL +IG DT + + L + Sbjct: 131 DALARAVDCVLNARRVDSFGVGASGFVGLDLQQKLTRIGRTALSWLDTDAAWSAAVTLDE 190 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 V IAIS++G+ V A +GAT IAIT+ ++ L A L T + ET +RS Sbjct: 191 QCVAIAISHTGTTAATVEFLAMAAAEGATTIAITNHDNTALAETADVVLTTAARETRFRS 250 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 ++ +R AQ V D LF G+ + + S+ ++++ R Sbjct: 251 GALGSRIAQLMVVDCLFTGVARASYDASMSALRKTYAAVHR 291 >UniRef50_C2KAY2 Transcriptional regulator n=6 Tax=Lactobacillus RepID=C2KAY2_9LACO Length = 281 Score = 90.5 bits (223), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 71/264 (26%), Positives = 127/264 (48%), Gaps = 31/264 (11%) Query: 1 MLYL-TKISNAGSEFTENEQKIAD--------FLQANVSELQSVSSRQMAKQLGISQSSI 51 ML L KIS+ + + IAD FL N+ EL +++ S +S+ Sbjct: 1 MLNLANKISDVYPNLNKTSKLIADVYFKEPRIFLNKNLQELGTITQT--------SGASV 52 Query: 52 VKFAQKLGAQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKEL 111 V+F + LG +GF + ++A ++E N + + I ++D + KL +L Sbjct: 53 VRFCRNLGFKGFKDFQIA------CAQEMPNKQDAMVDTIINTNDEPTSVLYKL----QL 102 Query: 112 ALEQTCA----LLDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACE 167 +L + A +D+ L ++++ A I + G G S L +DL +KL++ G V Sbjct: 103 SLGKNIADIGKTIDHKSLDAAVDLMRSAQQIYVAGEGASGLAAQDLFYKLIRSGKNVNFV 162 Query: 168 ADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLA 227 +H+ + K D+ I SYSG +E +L A+ A+K A ++A+T + DSPL+ +A Sbjct: 163 QSSHIALEQVANINKEDILIVFSYSGLTQEPLLMAKQAQKNNAKIVAVTRIQDSPLKNMA 222 Query: 228 HFTLDTVSGETEWRSSSMSTRTAQ 251 + S E R ++++ A+ Sbjct: 223 DTVITLPSNEKLLRYGAINSLFAE 246 >UniRef50_C7HWK5 RpiR family phosphosugar-binding transcriptional regulator n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HWK5_9FIRM Length = 297 Score = 90.1 bits (222), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 66/268 (24%), Positives = 136/268 (50%), Gaps = 9/268 (3%) Query: 12 SEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALI 71 S FT+ E A++ E+ + + +A++ S +SI KF +KLG +G+ + ++ L Sbjct: 26 STFTKTENFYAEYFLKLDDEILNKTISNVAEETESSTASIFKFIKKLGFKGYKDFQLNLA 85 Query: 72 GEYSASREKTNATALHLHSSITSDDSLEVIARKL---NREKELALEQTCALLDYARLQKI 128 + + + + TA+ +S+ +DS + IA K+ N + L++ + + + Sbjct: 86 TNINKNSDDSLLTAI---TSVNENDSPDEIANKIMAFNIQSMYTLKEDIKNIPF---ESC 139 Query: 129 IEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIA 188 + +I K+ I G+GGSA + D K ++ Y V +D+H+Q + + + D Sbjct: 140 LNLIKKSKKIHFFGMGGSATIAYDSYHKFLRTKYMVNYISDSHMQLSACTKMDQNDCIFV 199 Query: 189 ISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTR 248 S+SG E++ ++ A+K A +IA+T S + +++ + S E+E + S++ R Sbjct: 200 FSHSGRTLEVIEVSKVAKKNKAKIIALTGNPKSEMVKISDEAMILPSIESEHGTESLNAR 259 Query: 249 TAQNSVTDLLFVGLVQLNDVESLKMIQR 276 +V D+L + L+ N E+ K +++ Sbjct: 260 ILYLTVMDILLISLMYDNVEENKKYMKK 287 >UniRef50_D0XGH5 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XGH5_VIBHA Length = 296 Score = 90.1 bits (222), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 9/219 (4%) Query: 14 FTENEQKIA-DFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIG 72 T EQ IA +FL+ + + +S S +++A++LG+S + IVK ++KLG GF +L+ AL Sbjct: 31 LTRTEQSIAENFLKPHFMQ-KSTSIKEVAERLGVSTALIVKVSKKLGFSGFKQLKDALNA 89 Query: 73 EYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVI 132 + + + + DDS E I K+ + AL + +D + E I Sbjct: 90 HHHSDSYAPS-------EQLQPDDSCEQIVTKVLQNSINALTEILNFVDANMVSAAAEAI 142 Query: 133 SKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYS 192 A I++ GGS ++ D KL++ G R + D H+ + L + DV + +S+S Sbjct: 143 INARNIELYAAGGSNIICEDFQHKLLRFGIRASVPRDRHLMLMSASVLSEKDVVLVVSHS 202 Query: 193 GSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTL 231 G +++ A++ GAT+I+IT+ + L +L+ + L Sbjct: 203 GQTVDLMDAVRLAKQSGATIISITNNFHAELSQLSDYPL 241 >UniRef50_Q1LPJ6 Transcriptional regulator, RpiR family n=6 Tax=Burkholderiaceae RepID=Q1LPJ6_RALME Length = 338 Score = 90.1 bits (222), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 65/256 (25%), Positives = 123/256 (48%), Gaps = 9/256 (3%) Query: 16 ENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYS 75 +E+++AD++ + + + ++ ++A + G+SQ +I +F LG GF E ++ Sbjct: 14 PSERRLADYVARHGASVIRLTMPELADRAGVSQPTIARFCAALGYDGFKEFKLQFA---- 69 Query: 76 ASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKA 135 + +H + +DD IA K+ L L +++ I +++ A Sbjct: 70 ---QNVGGGTPFVHQDVEADDRPADIAGKVFDRTIATLMSVRNALSADQIEHGIRLLAGA 126 Query: 136 PFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSK 195 I+ G G S +V D+ K ++G +D HV + + L+ GDV + +S SG Sbjct: 127 RRIEFYGCGNSGIVALDIQHKFFRLGIPTTAYSDPHVFSMSAALLRPGDVAVLVSNSGRT 186 Query: 196 KEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVT 255 +++ A AR GA+V+A+T + SPL RLA + + E + M++R + Sbjct: 187 WDMLTAATLARSSGASVLALTH-SGSPLARLADVCVFSDVEEDSEVYTPMTSRICHLVLG 245 Query: 256 DLLFVGLVQLNDVESL 271 D+L G V L+ +S+ Sbjct: 246 DVLAAG-VALDRADSV 260 >UniRef50_C5EPZ9 Transcriptional regulator n=2 Tax=Clostridiales RepID=C5EPZ9_9FIRM Length = 295 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 74/278 (26%), Positives = 134/278 (48%), Gaps = 13/278 (4%) Query: 16 ENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYS 75 ++EQK AD+ ++++S MA+ G+SQ ++++F + LG +GF E + ++ Sbjct: 18 KSEQKAADYYLGYDGPVETMSIAAMARAAGVSQPTVMRFVKALGLEGFKEFKYQVLKASM 77 Query: 76 ASREKTNATALHLHSSITSDDSLEVIARKLNREKELA---LEQTCALLDYA-------RL 125 S E+ AR +R +E+ + Q+ + LD A + Sbjct: 78 GGNGSGMGEEEGGRSEEVLRYGYEISAR--DRPEEVPGRVVAQSVSYLDDALKHISPSSI 135 Query: 126 QKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDV 185 + ++I A I + + SA V DL KLM +G+ D ++Q + L DV Sbjct: 136 GRAAKLICGARQIAVYYVENSASVAGDLVTKLMYLGFNCIMYNDIYLQHISAGNLDSRDV 195 Query: 186 QIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSM 245 I ISYSGS K V + A+K+GA IAIT+ S + A L T S + + +++ Sbjct: 196 AIGISYSGSSKNTVDVMKLAKKKGAATIAITNFEHSLIAGHADILLCTSSQQLLY-GNAI 254 Query: 246 STRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 +R +Q +V D++++G++ + + + SS + +R Sbjct: 255 FSRMSQTAVVDMIYMGIILRDYGHFTEKLDESSRIIRR 292 >UniRef50_C4KYQ0 Transcriptional regulator, RpiR family n=1 Tax=Exiguobacterium sp. AT1b RepID=C4KYQ0_EXISA Length = 267 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 66/235 (28%), Positives = 116/235 (49%), Gaps = 21/235 (8%) Query: 6 KISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTE 65 +I + SE T +E+KIAD+L AN++E ++ +A + S +I +F +K+G ++ Sbjct: 4 QIKHVYSEMTGSEKKIADYLMANMNEAIEMNITDLANAIATSPGTITRFCKKIGVGSYSS 63 Query: 66 LRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCA-LLDYAR 124 L++ + +KT +++ SLE + R + L QT A L+D Sbjct: 64 LKLMM--------QKTLT-----ETNLPQTTSLEPMQRSY-----IELIQTTAHLIDQDE 105 Query: 125 LQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD 184 L I + I+ + + + GLG + LV +++ ++L ++G D+H + + D Sbjct: 106 LLAICKEITSSRSVHLYGLGNAGLVAQEMEYRLRRMGLLATTAFDSHSMVMDASIVTSED 165 Query: 185 VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDT--VSGE 237 V IA S SG +E+V + A++ G T +A SPL L + L T SGE Sbjct: 166 VVIAFSNSGESREVVQAMQLAKESGCTTVAFVGYQHSPLAELVDYRLLTAGASGE 220 >UniRef50_C1XRD4 Transcriptional regulator n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XRD4_9DEIN Length = 264 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 70/245 (28%), Positives = 115/245 (46%), Gaps = 8/245 (3%) Query: 15 TENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEY 74 T ++IA ++ N ++ + ++A G S++S+V+F + LG QGF + ++AL Sbjct: 2 TPALERIAQYVLHNADQVIYQTVIEVADAAGSSEASVVRFCRDLGFQGFQDFKLAL---- 57 Query: 75 SASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISK 134 AS T+ L TS S R+ L++T L++ L++++E I K Sbjct: 58 -ASDLVTSPVILPKQEKPTSAQSTADYVYNTARQ---VLDETRRLMNVDLLEEVVERILK 113 Query: 135 APFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGS 194 A I G+G + +D + KL ++G D H A + L D+ IS SGS Sbjct: 114 ARRIDFYGVGNAGTTAQDFAQKLQRLGCAAIAYPDPHSAAVSAATLGPKDLAFGISVSGS 173 Query: 195 KKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSV 254 + V E A+ GA +A+T SP+ R A L T + E+ SM + +Q + Sbjct: 174 SIDTVKALEQAKLAGAYTVAVTRGARSPITRFADAVLLTSAPESPLTRGSMGAKISQLML 233 Query: 255 TDLLF 259 D LF Sbjct: 234 LDFLF 238 >UniRef50_C6VNS3 Transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VNS3_LACPJ Length = 292 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 69/276 (25%), Positives = 132/276 (47%), Gaps = 5/276 (1%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 LT I + + ++KIAD++ A+ + + S +A +G+S +++ +F +++ F Sbjct: 13 LTLIRSYYPNLSVTDRKIADYIIADPIKTAAQSISDLAAAVGVSTATVSRFVKRISFSSF 72 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 + L + E+TNA A + + + IA +L+QT ++ A Sbjct: 73 RDFSRELTA--AEPIEQTNAEAFQ---DVEKQTTFKGIAESTFNSIRSSLDQTSQVMTEA 127 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L++ +E++ A I GLGGSA+ D K ++ G A +D +Q + + Sbjct: 128 DLKRAVELLLNARSIGFYGLGGSAVAALDGYHKFVRTGIPCAHNSDYDMQLMQAAQMNAS 187 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 DV + IS++G ++ + Q VIA+TS +SPL + + +V+ E +RS Sbjct: 188 DVAVVISHTGRNQQTLQVLATLTSQSVPVIALTSFGNSPLAKDSTVAFISVAEEINYRSE 247 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSE 279 +++ AQ S+ D LF+ ++E + + R E Sbjct: 248 GLTSLIAQMSIIDSLFLMTAVHGNIEMAESLGRVRE 283 >UniRef50_Q71VW8 Phosphosugar-binding transcriptional regulator, RpiR family n=15 Tax=Firmicutes RepID=Q71VW8_LISMF Length = 268 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 67/278 (24%), Positives = 134/278 (48%), Gaps = 27/278 (9%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L +I + E++IA ++ EL++++ +++A++ G S S+I +F + + Sbjct: 1 MTILNEIQQNYNRLPNKEKQIAKYILEKSDELKNINIKELAEETGTSISTITRFCRHVRC 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 F +L+M R T AT + S+ DD E + ++ ++ T L+ Sbjct: 61 DSFVDLKM---------RVNTAATMV---PSLGYDDLFEEVYSFYHK----VIDNTVKLI 104 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + A+++++++ I +A + I G+G S L ++S +L+++G V D H+ S Sbjct: 105 EPAKIREVVQYIQEAKRVYICGVGSSGLTAVEMSQRLIRMGLNVISVNDPHMMIITSSIT 164 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 K D I IS SG+ E+V + A+K + V TS +S + ++ T+ + Sbjct: 165 TKEDFVIGISNSGNTPELVTALKIAKKNKSKVATFTSFENSEMTEISDVTIPV------Y 218 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSS 278 + +S R NS +++V D+ S+ ++Q S Sbjct: 219 NTLFVSKRYFANSQFSIMYVM-----DIISMMLLQNES 251 >UniRef50_D0R5V5 Transcriptional regulator n=10 Tax=Lactobacillus RepID=D0R5V5_LACJF Length = 272 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 60/233 (25%), Positives = 121/233 (51%), Gaps = 13/233 (5%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M ++ + + + T++E K+A+++ + + + + + ++IV+ +KLG Sbjct: 1 MEFIQRYNQNKDKLTKSENKLANYIATHTEHVIYDTIKSLGTANNTGDATIVRLCKKLGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF++L++AL + + K+ H + +S+ S +V+ ++E+T L+ Sbjct: 61 SGFSDLKIALAQDSMMTTSKS-----HEEAQTSSELSSKVLIS--------SIEKTEELI 107 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + + L++ + +++KA I I GLG S RD ++IG E+D H+Q V+ L Sbjct: 108 NPSVLKQAVSLLAKARRIHIFGLGHSGESARDYERTWLRIGLIANAESDPHIQVQVATLL 167 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDT 233 K D+ + +S SG K+ + A++ GA +IAIT+ SP+ +L +L T Sbjct: 168 SKDDLVVGLSLSGHTKDTYDSLKVAKEYGAKIIAITNDLTSPIAQLGDVSLQT 220 >UniRef50_B0MBA6 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MBA6_9FIRM Length = 286 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 67/230 (29%), Positives = 117/230 (50%), Gaps = 16/230 (6%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L I N + E++IAD+++ + E+ ++ Q+AK G S++++V+ + LG QG+ Sbjct: 8 LDSIDNLYQQLFSKEKQIADYIKDHPDEVVMMNVSQLAKASGTSEATVVRTCKHLGYQGY 67 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKL--NREKELALEQTCALLD 121 +LR+ L + A S T + +++ + R L N K++ L+ CAL Sbjct: 68 YQLRLILSRDIGTKSNDIGIDADTDFVSYTFERNIQNL-RNLSSNLSKDVLLQ--CAL-- 122 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 ++ KAP + I G + + DLSF+L + G + + + Sbjct: 123 ---------ILLKAPAVHIIATGNTTPIALDLSFRLSRFGVQSFSSSISEYYLNNVSLGS 173 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTL 231 K DV IAIS SG+ K+++ A+ A+ G T+I+ITS +DSPL R++ L Sbjct: 174 KEDVVIAISGSGTSKQVLQAADIAKDIGMTIISITSDSDSPLARVSDHIL 223 >UniRef50_D1BBP1 Transcriptional regulator n=2 Tax=Micrococcineae RepID=D1BBP1_SANKS Length = 290 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 59/228 (25%), Positives = 116/228 (50%), Gaps = 15/228 (6%) Query: 6 KISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTE 65 +I+ + E+++ D + +V+ +++++A + G+++SS+++ Q+LG +G+ + Sbjct: 19 RIATVRNTLQPTERRVVDLVLDDVAGAVEATAQEIADRAGVARSSVIRTCQRLGYRGYPQ 78 Query: 66 LRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELA--LEQTCALLDYA 123 LR+AL E ++ E + T D+ + R + LA L Q ++LD Sbjct: 79 LRVALARELASGAEPS-----------THPDT--AVGRVRTHVESLAATLPQITSVLDDD 125 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 ++++ + + A + +TG G S+ + DL+ +L +G C AD Q + L Sbjct: 126 QVERAVTLCVGAGRVLVTGNGLSSPLAADLALRLTAVGRPTECVADPIGQQIAAAQLTSA 185 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTL 231 D+ + +S SG+ + + A A R G TV+ +TS +SPL LA L Sbjct: 186 DLCLVVSGSGASESSLRVARAGRAAGVTVVVLTSFVESPLTALADVAL 233 >UniRef50_A8RDU7 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RDU7_9FIRM Length = 281 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 129/258 (50%), Gaps = 4/258 (1%) Query: 15 TENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEY 74 +ENE ++ ++ N ++ S+S++++A + S +++++ ++L +G++EL++ L E Sbjct: 18 SENEVRM--YILRNSKKVISMSTQELAAKSYTSPATVIRLCKRLELKGYSELKIQLASEI 75 Query: 75 SASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISK 134 A E N + ++ DSL + K+ ++E+T LLDY L + I Sbjct: 76 KAF-ETMNLDVVD-QTTFKKGDSLTELIDKVTDISIHSIEETRLLLDYEVLLCVARQIMD 133 Query: 135 APFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGS 194 A I + G+G S + D +K M+IG ++C + Q + I ISYSG Sbjct: 134 ASIIDLYGVGASNNIAFDAGYKFMRIGKSISCLSLIDRQRIQAINSDSSHFAIIISYSGE 193 Query: 195 KKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSV 254 EI+ A+ K ++IT + L L + L S E+ +R+ ++ +RT+ + Sbjct: 194 TPEIIEIAKILEKNNVPAVSITGSIQNQLVNLVEYNLFVSSRESNFRNGAIVSRTSTLYM 253 Query: 255 TDLLFVGLVQLNDVESLK 272 DL+++ + LN +S K Sbjct: 254 LDLIYITCISLNYDDSAK 271 >UniRef50_A8UCF8 Phosphosugar-binding transcriptional regulator, RpiR family protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UCF8_9LACT Length = 283 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 65/285 (22%), Positives = 139/285 (48%), Gaps = 13/285 (4%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L +I + + +E+KI +++ E +++ Q+ + +++++ ++G GF Sbjct: 7 LGRIKSVLDDLPNSERKIGEYILTYPEETIKMTTSQLGIAAESNSTAVIRLCNRIGVNGF 66 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 T+L++ L E + E ++ I +++++ I KL ++E+T +L++ Sbjct: 67 TKLKVNLSAEIVSVDESG-------YAEIEAEETIGTIKNKLLTNAFKSMEETISLMNEF 119 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 ++++IE+I A + + G+G S ++ ++ K ++G V C D H ++ A K Sbjct: 120 DIERVIELIESASMVYVYGVGNSRIIAENMVQKWSRVGKIVICPTDNHQLVSMLGAAPKN 179 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTV---SGETEW 240 + IS SG +EI+ + A+K + +T + L A +T+ TV ++++ Sbjct: 180 ALFFGISNSGETREIIELIKLAKKCSLKTVGLTQFGQNSLTNKADYTIQTVKTIESDSQF 239 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 SSS+ AQ D+LF + N V + I++S E + K Sbjct: 240 ISSSLH---AQLIAIDVLFYSFLSKNYVAGTERIKQSREEMNQYK 281 >UniRef50_D1AUV3 Transcriptional regulator, RpiR family n=5 Tax=Bacteria RepID=D1AUV3_STRM9 Length = 272 Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 58/261 (22%), Positives = 125/261 (47%), Gaps = 14/261 (5%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M Y+T I + F++ E K+AD++ + + ++ K++ +S+++IV+F +K+G Sbjct: 1 MKYITLIQSFYPSFSKQEIKVADYVIKEKDAICFMPLHEITKKINVSEATIVRFVKKIGF 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF + ++ + E + ++ N T + +E I + ++ T L+ Sbjct: 61 KGFIDFKLEVAREIATIEDERN----------TKEHYIENIEYNIIE----TIKNTKNLI 106 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + ++ IE I + + + G+G S + + + M+ G +D H Q + Sbjct: 107 NKEDVENAIEAIENSKKLYVFGMGASGVAALEFQNRFMRFGKIGHSVSDGHFQVMYASTT 166 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + DV + IS SG +++ A++ G +IAIT+ SP+ +L+ + T ET Sbjct: 167 TEKDVIVVISLSGETVDLIYPLSIAKENGCKIIAITNYILSPIAKLSDIVILTSGKETLL 226 Query: 241 RSSSMSTRTAQNSVTDLLFVG 261 ++ ++ +Q + D+L G Sbjct: 227 NGGALVSKMSQLYIIDVLATG 247 >UniRef50_C6JFM8 Transcriptional regulator n=2 Tax=Clostridiales RepID=C6JFM8_9FIRM Length = 285 Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 66/268 (24%), Positives = 122/268 (45%), Gaps = 19/268 (7%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L I+ T++ +K+AD++ ++ +E Q +S +A+ +S+++I +F + LG G+ Sbjct: 6 LDSITEQYHSLTKSGKKLADYVFSHTTETQYLSITSLAENCKVSEATITRFCRGLGLSGY 65 Query: 64 TELRMAL--------IGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQ 115 ++AL +G+ S S E ++S+DS+ I K++ L+L + Sbjct: 66 NAFKLALAQADRTTDLGDSSNSAEP-----------VSSEDSISTICAKVHAANLLSLNE 114 Query: 116 TCALLDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQAT 175 + AL D + K I ++S + I G GGS ++ + + D+H+QA+ Sbjct: 115 SYALYDEEEMSKAISILSSSRRIYCFGQGGSMIMAMEAWARFSTASPNFVHICDSHMQAS 174 Query: 176 VSQALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVS 235 D + SYSGS +++ + A + VI IT S A L Sbjct: 175 AIAMADSKDAILFFSYSGSTRDMCDTLQIASSRHVPVILITHFPKSAGAEFASVVLQCGY 234 Query: 236 GETEWRSSSMSTRTAQNSVTDLLFVGLV 263 E+ +S S++ + Q + D LF G Sbjct: 235 NESPLQSGSVAAKVGQLFLIDCLFYGYC 262 >UniRef50_B2UK47 Transcriptional regulator, RpiR family n=5 Tax=Ralstonia RepID=B2UK47_RALPJ Length = 280 Score = 87.0 bits (214), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 62/229 (27%), Positives = 110/229 (48%), Gaps = 16/229 (6%) Query: 6 KISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTE 65 +I A + E+++AD++ + S+ +A++ G+SQ ++++F + +G G ++ Sbjct: 20 RIRAARPSLSPAERQVADWVLRQPGTVLSLPVAAIAREAGVSQPTVIRFCRSMGCHGLSD 79 Query: 66 LRMALI-GEYSASREKTNATALHLHSSITS--DDSLEVIARKLNREKELALEQTCALLDY 122 ++ L G + + + A ++ S T D+++ +A +R LAL+ AL+D Sbjct: 80 FKLRLAQGNAAHDKPRGAAAPSNVPRSGTRVLQDTIDALAAMRDRFDPLALDAAVALVDT 139 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 A I + G G S +V RD K + G +D ++ + L+ Sbjct: 140 AHR------------IDLYGFGSSGVVARDAQTKFFRYGIPANAYSDPYLVSMSLNVLQA 187 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTL 231 GDV IAIS SG+ E+ E R+ G VIA+T+ SPL LA L Sbjct: 188 GDVVIAISKSGALPELQTAVERVRELGVHVIAVTA-PGSPLAALADVVL 235 >UniRef50_P46118 HTH-type transcriptional regulator hexR n=302 Tax=Gammaproteobacteria RepID=HEXR_ECOLI Length = 289 Score = 86.7 bits (213), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 73/264 (27%), Positives = 128/264 (48%), Gaps = 12/264 (4%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L KI + +++E+K+A+ + A+ S MA + +S+ ++ +F + + Sbjct: 1 MNMLEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAAMALEANVSEPTVNRFCRSMDT 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF + ++ L ++ N T +++ ++ DDS+E K+ L+ L Sbjct: 61 RGFPDFKLHL------AQSLANGTP-YVNRNVNEDDSVESYTGKIFESAMATLDHVRHSL 113 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D + + + ++++++A I GLG SA V D K + V D +Q Sbjct: 114 DKSAINRAVDLLTQAKKIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNC 173 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHF--TLDTVSGET 238 GDV + IS++G K +V A+ AR+ A VIA+TS +PL R A TLD V +T Sbjct: 174 SDGDVVVLISHTGRTKNLVELAQLARENDAMVIALTS-AGTPLAREATLAITLD-VPEDT 231 Query: 239 EWRSSSMSTRTAQNSVTDLLFVGL 262 + M +R AQ +V D+L G Sbjct: 232 DI-YMPMVSRLAQLTVIDVLATGF 254 >UniRef50_Q1WQV4 Transcriptional regulator, RpiR family n=4 Tax=Lactobacillus RepID=Q1WQV4_LACS1 Length = 274 Score = 86.7 bits (213), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 60/230 (26%), Positives = 114/230 (49%), Gaps = 12/230 (5%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L I S + E+K+A + N E+QS++ ++AK+ G+S ++I +F +++ Sbjct: 1 MNLLNNIEAIFSTLSRQERKVALKVLQNPQEVQSMNITKLAKKAGVSNATITRFVRRMEC 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 F + ++ L ++S E + S SD + K+ + L+ T L Sbjct: 61 SDFHDFKLKLAISAASSPE--------VPVSSESDS----MGDKVYEFYQKVLQGTWKQL 108 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D + I+ I+KA + + GLG S ++ + +L+++G C D+H+ S + Sbjct: 109 DTDTIHNIVHAITKARRVYVYGLGSSGYTAQEFTQRLIRMGIAAFCTVDSHMMFIDSTIV 168 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFT 230 DV IAIS SG+ ++ + A+++G +I+IT SPL L+ ++ Sbjct: 169 NSDDVIIAISQSGNTDDVNVACSLAKQKGTKIISITGFYQSPLIELSTWS 218 >UniRef50_B6GAY7 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAY7_9ACTN Length = 288 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 65/259 (25%), Positives = 125/259 (48%), Gaps = 7/259 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 + +I + + ++ E+ IAD++ AN ++ S+++R +A++ S +S+ +FA++LG + F Sbjct: 8 INEICSLYDQLSDGERSIADYMMANPFDVASMTTRDIAQESETSAASVSRFARRLGYESF 67 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 + LR AL+ + +A ++ + + + + LE + NRE L T +LLD Sbjct: 68 SALRQALLRDEAAYDDRGQLAVISIDAPAAA---LETVLMVKNRE----LTDTLSLLDAR 120 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L + + ++ ++ I +G + V SF L ++G R AC T S +L Sbjct: 121 ELVRAVHLLERSVSITFAAVGNTIPVALSASFLLGQLGLRCACAPTTEAMMLDSLSLTPR 180 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 DV + +S SG K + + I IT+ SPL R A L + + + Sbjct: 181 DVIVFLSKSGHSKRLNKMMDNVIDSETPTIVITNQPSSPLARRATCVLHAATHDKMLSTE 240 Query: 244 SMSTRTAQNSVTDLLFVGL 262 + + N + ++LF+ L Sbjct: 241 LPFSHNSINYIIEVLFLLL 259 >UniRef50_A6UGP6 Transcriptional regulator, RpiR family n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6UGP6_SINMW Length = 284 Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 78/257 (30%), Positives = 135/257 (52%), Gaps = 15/257 (5%) Query: 12 SEFTENEQKIADFLQANV--SELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMA 69 + ++ E+++A ++ NV S QS+S+ +A+ +S +++++ + G +GFT+L++A Sbjct: 21 PKLSDAERRVALWMLKNVDLSIRQSMSA--IAQATDVSDTTVLRMCRTAGFEGFTDLKLA 78 Query: 70 LIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKII 129 L E RE HSS + S A +L R AL T +LD A K + Sbjct: 79 LAQE---PREAIE------HSSGEPEASALQAAGRLFRAITQALNDTFGVLDEATFAKAL 129 Query: 130 EVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAI 189 ++++ A I + G+GGS +V + + +++G R D+ +Q + GD+ +AI Sbjct: 130 DLVANAKHIMVGGVGGSGIVAQAFYQRCIRLGLRCDAPIDSQLQIMHAALTGPGDLVVAI 189 Query: 190 SYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRT 249 SYSG + VL + A+ +GA+ + IT + S L RLA L +VS E S M+ + Sbjct: 190 SYSGITSDPVLVLQEAKARGASTLCITGNSSSALARLADVVLVSVSHEQG--SEPMAAQI 247 Query: 250 AQNSVTDLLFVGLVQLN 266 AQ ++ D L+ LV N Sbjct: 248 AQMTLVDALYAALVARN 264 >UniRef50_C3WAG5 Transcriptional regulator n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WAG5_FUSMR Length = 283 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 64/272 (23%), Positives = 128/272 (47%), Gaps = 13/272 (4%) Query: 14 FTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGE 73 F+ EQKIA F+ N + ++ M++++G S +SI +F +K+G + F L++ + E Sbjct: 17 FSPAEQKIALFILENTFAVIDMTIEDMSEKIGTSVASISRFTKKIGFENFYLLKLGIAKE 76 Query: 74 YSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVIS 133 + S KT + ++ +S+ T I + + LE++ + ++++I E+I Sbjct: 77 FVNSSNKTISLNVNKNSNATD------IYTNVAKTNSAILEESIEYFNTDKMEEISEIIL 130 Query: 134 KAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSG 193 A I + +G S ++ ++ +K +++G + + D H Q + L DV + S+SG Sbjct: 131 NANHIYLFAMGASGILAKESWYKFIRLGLKCSMIEDFHSQLLQASILDDTDVALIFSHSG 190 Query: 194 SKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNS 253 K+++ E + A I IT+ +P + L T S+R Q Sbjct: 191 INKDVLTLLEIINETPAYSIGITNYARTPFSQSVDICLFFSENSTPMDKVGFSSRIPQLI 250 Query: 254 VTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + + L+ + SLK+ ++S +R K Sbjct: 251 IIESLY-------RILSLKLGKKSKICQERYK 275 >UniRef50_C7NDE7 Transcriptional regulator, RpiR family n=2 Tax=Leptotrichia RepID=C7NDE7_LEPBD Length = 286 Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 64/253 (25%), Positives = 120/253 (47%), Gaps = 3/253 (1%) Query: 14 FTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGE 73 FT NE++IAD++ ++ E+ +S+ +AK+ +S++++V+F +KLG + + E + L E Sbjct: 12 FTNNEKEIADYILRHLEEIHLLSAENLAKKAFVSKATVVRFCRKLGVERYREFQRRLDKE 71 Query: 74 YSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVIS 133 E L + S+ + I + E + T LD ++KIIE + Sbjct: 72 ---VEEMMKIKGLLSEEPVNSETKYDEIISIIPSLYERVIGATKLNLDTTVMEKIIEKLK 128 Query: 134 KAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSG 193 A I+I G G S ++ + SFK M +G A + +S + D+ + IS SG Sbjct: 129 NAKKIEIYGTGISYILAKLTSFKFMTLGIESAAYDGLNEHYIISAEKGEKDIALIISLSG 188 Query: 194 SKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNS 253 + ++ AE +K+ V+ I + + +++ ++ + +S T N Sbjct: 189 TNPYMIRIAEYLKKRNVFVVGIGNGSSEEIKKACSEYIEIHAPNYILSFEMVSLFTGINY 248 Query: 254 VTDLLFVGLVQLN 266 V D+ F L+ LN Sbjct: 249 VLDIFFTSLLVLN 261 >UniRef50_Q0BBX6 Transcriptional regulator, RpiR family n=65 Tax=Proteobacteria RepID=Q0BBX6_BURCM Length = 324 Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 74/278 (26%), Positives = 144/278 (51%), Gaps = 12/278 (4%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 + +I+ E E E+K+A ++ A+++ S +A+ G+S +++ +FA+ +G + Sbjct: 40 VARIAECAPELREAERKVAAYILADLARAAHASIGALARDAGVSVATVTRFAKAVGCRDV 99 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 EL++ L+ + +A ++ L + ++D+ A + E +AL LL Sbjct: 100 RELKV-LVAQAAAVGQRF----LVPSDAHPAEDASP--ASVVYDEIRVALAHNHQLLRNT 152 Query: 124 RLQKIIEVISKAPFIQITGLGG-SALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 ++++ A + + G GG S + +L F+L++ G VA D+ +Q V+ L + Sbjct: 153 SFDAAADLLAGAKMVYVYGQGGGSTALADELRFRLVRFGRPVASYQDSLLQRMVAATLSR 212 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 V +A+S SG E++ A++ GAT+IAIT+ SPL +LA + V+ ET++ Sbjct: 213 DAVVVALSVSGRVPELLESCRLAKRYGATLIAITAPA-SPLAKLADHLIPVVAFETDFIY 271 Query: 243 SSMSTRTAQNSVTDLLFVGL-VQLNDV--ESLKMIQRS 277 ++R A D+L G+ ++L D ESL+ I+ + Sbjct: 272 KPSTSRYAMMMAIDVLVTGVALRLGDAGRESLRRIKHA 309 >UniRef50_C5CG85 Transcriptional regulator, RpiR family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CG85_KOSOT Length = 275 Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 61/245 (24%), Positives = 120/245 (48%), Gaps = 10/245 (4%) Query: 15 TENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEY 74 +E+E+++A ++ ++ + ++AK S++++ + +KLG G+ +++L E Sbjct: 14 SESERRVAKYIIERPDDVIHYTITELAKFSHSSEATVYRLVKKLGFSGYQSFKISLAREL 73 Query: 75 SASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISK 134 S +E S+ S + ++ +E ++T A+LD L+K +E+I Sbjct: 74 SIPQEVIEEG---------SEGSYQNFVERIVQENISLAKETMAVLDLDALKKAVELIIN 124 Query: 135 APFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGS 194 A + G+G SA+V + SF +G+ D H Q V+ L DV + IS++G+ Sbjct: 125 ARRLVFFGVGRSAVVAQSGSFNFALLGFSSTHYIDPHAQVMVASGLTNEDVVVGISHTGT 184 Query: 195 KKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSV 254 ++ V + A GA I ITS +SP+ + L T +G+ ++S R + + Sbjct: 185 IRDTVKSVQVAHAAGAKTIVITSGINSPITEVGDVVLYTAAGKPSTSEFTVS-RIGEFLI 243 Query: 255 TDLLF 259 D+L+ Sbjct: 244 LDILY 248 >UniRef50_C5CD76 Transcriptional regulator, RpiR family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CD76_KOSOT Length = 278 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 76/286 (26%), Positives = 136/286 (47%), Gaps = 26/286 (9%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 +L + + T +E+K+A +++ N ++ ++S + +A + + S+++K A+KLG G Sbjct: 5 FLNQFNERVGALTSSEEKVARYIKENPLKVVNMSIQSLANECFVVPSTVIKTAKKLGFSG 64 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELA---LEQTCAL 119 F+EL++AL E ++IT DS ++++ R E +EQ Sbjct: 65 FSELKIALAAELD-------------KAAITGLDS-DILSNTFKRYAEFVQELIEQASVR 110 Query: 120 LDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQA 179 L L + ++ +A I I G ++ G DL KL++IG A + ++Q + Sbjct: 111 LSEELLNEAARIVLEANKIDIYSFGFDSIAGLDLYLKLVQIGKTTAHYENGYMQMISATY 170 Query: 180 LKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETE 239 L D IAIS +GS K++ + A + GA VI I + S L L LDT Sbjct: 171 LGTEDAVIAISSTGSSKDLFDAVKRAIESGAKVIVIAP-SSSMLAGLETVYLDTYFSTLV 229 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 ++TR Q + D L++ + LKM ++SSE ++ + Sbjct: 230 LPEGGIATRLVQLFLIDQLYLRI--------LKMDEKSSERYEKFQ 267 >UniRef50_C3RR03 Sugar isomerase n=2 Tax=Bacteria RepID=C3RR03_9MOLU Length = 298 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 67/262 (25%), Positives = 126/262 (48%), Gaps = 9/262 (3%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 ML KI A ++++Q IAD+L S ++ ++ +++A S +I++ A+KLG Sbjct: 1 MLIEQKIERA--RLSQSQQLIADYLLEKRSNIKDMTIKELAVATYTSTGTIIRLAKKLGY 58 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 G+ + + + E T+ + + D+++ IA K+ + L T ALL Sbjct: 59 HGYEDFKADFLKE--VYYLDTHFKNIDPNFPFVKTDNIQKIASKVTLLAQETLSDTLALL 116 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 ++ LQK + ++ KA I + + S L+G+ +++IG V + + + Sbjct: 117 EHDNLQKALRIMQKANQIHLAAISYSLLLGQIFKLDMLRIGKNVNICNTNGEELFLPAVI 176 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 K D I ISYSG + A + + +IAITSL D+ L++ A L + E + Sbjct: 177 KNNDCIIIISYSGEIHNLCSLARTLKGRSVPIIAITSLGDNELKKYADVVLHISTREKLY 236 Query: 241 RSSSMSTRTAQNSVT---DLLF 259 S ++ + +NS+ D+L+ Sbjct: 237 --SKIAGYSNENSIKLILDILY 256 >UniRef50_C3RM33 Sugar isomerase n=2 Tax=Bacteria RepID=C3RM33_9MOLU Length = 312 Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 63/262 (24%), Positives = 129/262 (49%), Gaps = 3/262 (1%) Query: 13 EFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIG 72 +F+ +E+ IA ++ N ++ ++S+ Q+AK S ++I + QKL +G+ + ++AL Sbjct: 12 DFSTSEKLIATYILKNGPDVLNMSTSQLAKATYTSPATITRLCQKLEYKGYNDFKIALSA 71 Query: 73 EYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVI 132 + + ++ + T + D++ I + + ++ T +D L KII ++ Sbjct: 72 QLQYTFDRNSETNPNF--PFKKRDTIHTIKHSIATLAKDSINLTVNNIDNDILAKIIIML 129 Query: 133 SKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYS 192 +A I I G+ G + D +K+ +IG V + Q + K I ISYS Sbjct: 130 DQAKVIDIYGVSGPLRIASDFQYKMFRIGKNVQIAPMVNEQLFQAAQSNKDHCAILISYS 189 Query: 193 GSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW-RSSSMSTRTAQ 251 G E++ AE +++ +IAITS +S L +L + L S E + + S+ + + Sbjct: 190 GETNEVIAAAELLKRRKVPMIAITSFGESRLSKLCDYVLFLDSRERIYSKVSTFGSTISI 249 Query: 252 NSVTDLLFVGLVQLNDVESLKM 273 + + D+++ L + E+L++ Sbjct: 250 HIMLDIIYSCLFARHYDENLEL 271 >UniRef50_Q1QSE2 Transcriptional regulator, RpiR family n=28 Tax=cellular organisms RepID=Q1QSE2_CHRSD Length = 289 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 69/268 (25%), Positives = 118/268 (44%), Gaps = 11/268 (4%) Query: 13 EFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIG 72 F +EQK+A F+ + ++ + +A + +S+ ++V+F + LG GF + ++ L Sbjct: 15 HFRRSEQKVARFVLRHPEDVIHMRIVDLATEAKVSEPTVVRFCRALGCNGFQDFKLKLAQ 74 Query: 73 EYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVI 132 + + S+ DS+ A + L LD+A L K + + Sbjct: 75 MLATGSQFAQ-------FSMNDSDSVAEFAHNIFDSTVGTLLSVRDRLDHAALGKAVTAL 127 Query: 133 SKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYS 192 + A ++ G G S V D K ++ A D H+Q + L DV +AIS + Sbjct: 128 AMANRVEFYGFGASGAVAFDAQHKFFRLQISTAAYTDPHMQNMSAVTLTPRDVVVAISQT 187 Query: 193 GSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQN 252 G + +V AR+ GATVI + +DSPL L E + MS+R A Sbjct: 188 GRTRALVASVRLARETGATVIGLCP-SDSPLASEVTLPLYIDVHEDTEIYTPMSSRVAHL 246 Query: 253 SVTDLLFVGLVQLND---VESLKMIQRS 277 + D+L VG+ + E LK +++S Sbjct: 247 VIIDVLAVGVAKTRGPKLAEQLKSVKKS 274 >UniRef50_B1Q8U9 Putative phosphosugar-binding transcriptional regulator n=1 Tax=Clostridium botulinum NCTC 2916 RepID=B1Q8U9_CLOBO Length = 291 Score = 84.0 bits (206), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 62/253 (24%), Positives = 129/253 (50%), Gaps = 9/253 (3%) Query: 11 GSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMAL 70 ++F+ +E+ I D++ + ++++ + ++++K+ I+ S+ ++ ++KLG +G+ EL+ Sbjct: 9 NTKFSPSEKIIVDYMLKHKYDIKNKTIKEISKETFINPSTFIRISKKLGYKGWNELKEKY 68 Query: 71 IGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIE 130 + E +N + + +DS I+ KL + E+ ++ T +LL L+ +E Sbjct: 69 LNE--IKYLDSNFENIDANIPFDKNDSYISISNKLGKLNEITIKDTLSLLSNDDLKNAVE 126 Query: 131 VISKAPFIQITGLGGSALVGRDLSFKLMKI-GYRVACEADTHVQATVSQALKKGDVQIAI 189 +++ A I++ S L+ +D + K+ +I Y C D Q + +K I I Sbjct: 127 ILNSASDIKLFANNESILISQDFALKMNRIKKYVSICTVDGE-QVFEAFNCRKNSCAIII 185 Query: 190 SYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRT 249 SYSG K ++ +K ++AITSL ++ L A+ L + E + S +S T Sbjct: 186 SYSGETKRLLETIPILKKYNIPILAITSLGNNTLANNANCVLRITTREHLY--SKISNFT 243 Query: 250 AQNSVT---DLLF 259 + NS+ D+L+ Sbjct: 244 SNNSICFILDILY 256 >UniRef50_Q03HW7 Transcriptional regulator n=13 Tax=Lactobacillales RepID=Q03HW7_PEDPA Length = 295 Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 74/263 (28%), Positives = 136/263 (51%), Gaps = 10/263 (3%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 ML + K+SN FT EQ+IAD++ N++++ ++ +++K S S++V+ +KLG Sbjct: 1 MLLIDKLSN-HENFTNTEQRIADYILKNITDIPPMNIDKLSKVTYTSHSAVVRLTKKLGF 59 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF + ++A I E + + TN ++ + S+DS+ I++K+ ++++T A L Sbjct: 60 EGFKDFKVA-ISE-AVYSQTTNMNSVDANFPFDSNDSVSTISKKVAELSVESIQRTFAQL 117 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQA- 179 D +++ I+K+ I + G S + R KL+K+ R A + + + A Sbjct: 118 DERLIEEAANTIAKSERIFLFAQGDSQIRARSFQNKLVKLN-RFAILGEEYSDEDWTAAN 176 Query: 180 LKKGDVQIAISYSG--SKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGE 237 L K D I ISY G S+ E +L + K + V +T SPL RLA + T E Sbjct: 177 LTKKDCAIFISYGGRISQYERMLTHFSENKIPSVV--LTGNQKSPLIRLAQTAIVTTQNE 234 Query: 238 TEW-RSSSMSTRTAQNSVTDLLF 259 ++ + S+ S++ + D +F Sbjct: 235 YDFLKISTFSSQITFEYLLDTIF 257 >UniRef50_C2C459 RpiR family transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C459_LISGR Length = 284 Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 63/263 (23%), Positives = 125/263 (47%), Gaps = 16/263 (6%) Query: 12 SEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALI 71 + FT E+ IAD++ AN + ++ ++ +++A++ S +SI++F +KLG GF ++ L+ Sbjct: 10 TNFTNTEKVIADYILANTANMEQLTIQELARKTYTSHASIIRFTRKLGLDGFKSFKIELL 69 Query: 72 GEYSASREKTNATALHLHSSITS------DDSLEVIARKLNREKELALEQTCALLDYARL 125 KTN H+ S I DDS+ I+R++ + + ++ LLD +L Sbjct: 70 --------KTNQQENHVLSEINPNIPFEHDDSILKISREMMELTQQTITESYHLLDEQKL 121 Query: 126 QKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDV 185 + + A I + LG S + KL KI D A + + D Sbjct: 122 FQATRQLYDAKRIFLFALGDSQIRAESFQNKLWKINQYAILATDRSEWAVHTANITSEDC 181 Query: 186 QIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTL--DTVSGETEWRSS 243 + ISY + AE + +G +I +TS S L ++A + + ++E + + Sbjct: 182 ALFISYDAKSPHDITAAEWLKSRGVPIILLTSHITSKLSKIADICIAVPNLEDKSELKIA 241 Query: 244 SMSTRTAQNSVTDLLFVGLVQLN 266 + +++ A + + +++F L Q++ Sbjct: 242 TFASQIAFDYILNVIFSTLYQID 264 >UniRef50_C9A459 Phosphosugar isomerase transcriptional regulator n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A459_ENTGA Length = 268 Score = 83.6 bits (205), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 55/235 (23%), Positives = 120/235 (51%), Gaps = 21/235 (8%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M +T I + +E + + K+AD++ N+ E+ +++S +A S +++++F++KLG Sbjct: 1 MSVVTTIESIKNELSTTDLKLADYIVENLDEIPTMTSNVLAVHSNTSPAAVIRFSKKLGF 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 F++ ++AL +++ N + +S I +DDS + K+ R ++ ++ T +L Sbjct: 61 SKFSDFKLAL------TKDIENRI-YNEYSDIQNDDSFQTAKNKILRNNKMIIDATDPIL 113 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D +Q++++ + A I + G+G S L D+ K +IG V + D ++ ++Q + Sbjct: 114 DEQTVQQVVDKMFHAKRIYVYGVGTSVLAAEDIRQKWTRIGKTVIFDKDRYL---LTQQM 170 Query: 181 KKGDVQ---IAISYSGSKKEIVLCAEAARKQGATVIAITSL--------TDSPLR 224 K IS+SG ++++ E A+ G + ++ L D+P+ Sbjct: 171 KNDGADSLFWGISHSGKNRDVLSLVEIAKSLGMPTLGMSQLGQNQLTKKVDTPIH 225 >UniRef50_C1I751 Predicted protein n=3 Tax=Bacteria RepID=C1I751_9CLOT Length = 246 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 61/247 (24%), Positives = 126/247 (51%), Gaps = 19/247 (7%) Query: 12 SEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALI 71 ++ T +EQK+ ++ AN ++ + +AK+ S++ I+ +QKLG +GF++L+ Sbjct: 9 NKLTNSEQKVFTYIYANQQKVIKMKINDLAKETFTSKTVIINLSQKLGFEGFSDLKY--- 65 Query: 72 GEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEV 131 +L S+ ++DD ++V+ L + +E+T +++ +KI Sbjct: 66 ---------------YLKSNNSADDDIKVL-EDLQYGLKQNIEKTFVVIEADLYKKISRE 109 Query: 132 ISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISY 191 + +A + + G S G L+ L+ +G + D ++ V L+ ++ I IS Sbjct: 110 VIEAKTVYVFARGTSKAAGYYLNHLLLTLGVKCIFVKDYNLLTLVGNTLESDELVILISL 169 Query: 192 SGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQ 251 SG+ ++I+ A A+ +G+ IAITS ++ L +++ +TL VS +TE + + +R Sbjct: 170 SGNTEKILEVANIAKVKGSRTIAITSFGNNELSKISDYTLHCVSNDTETKFNDSISRIGM 229 Query: 252 NSVTDLL 258 V ++L Sbjct: 230 FIVIEML 236 >UniRef50_B9E8A7 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E8A7_MACCJ Length = 285 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 120/257 (46%), Gaps = 6/257 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L +I+ FT E++IAD + ++ ++ +++A S+++IV+F+++LG G Sbjct: 5 LGQITKMYDSFTPVEKRIADVVIEYPEKVVNLPIKEIAHLSNTSEAAIVRFSKRLGLSGI 64 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 +++ L E +K T + L +DD EV+ K+ AL T ++ Sbjct: 65 KVVKVELARELHTIADKKVPTKIEL-----TDDE-EVMKEKVFNNTIQALYNTEKVISAK 118 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 + + + I+ A + I G+G S +V DL KLM I D T+ + G Sbjct: 119 VIDEAAQAITSAKRVMIFGVGNSRVVATDLHVKLMNIDQSAILATDLLSAITLLGHYEAG 178 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 DV S + K I + A+++G +I +T SP R+A L E E Sbjct: 179 DVLFVTSETSKNKVITDICKYAKEKGIKIILLTQKFSSPAIRMADIVLAMAKEENEINLG 238 Query: 244 SMSTRTAQNSVTDLLFV 260 M+ RTAQ ++ D+L++ Sbjct: 239 YMTVRTAQLTIVDVLYL 255 >UniRef50_A4EBN8 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBN8_9ACTN Length = 285 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 3/222 (1%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L + N+ S F E ++ IA +L + +L++++ ++A++ S ++I++F +KLG G+ Sbjct: 3 LDSLRNSAS-FNETDRAIATYLLNHTGDLKTLTMAKLAQETYTSNATIIRFCKKLGLSGY 61 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 EL M LI E S AT H + S DS+E I L + ++QT LD A Sbjct: 62 RELIMQLIQEISGDYLLA-ATVDH-NRPFGSTDSIEAIEGNLANLLKGVIDQTKIELDSA 119 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 +L I + + AP I I G S L G L+K+ V D +Q + + G Sbjct: 120 KLSIIAKAVLSAPRIYIFAKGESYLAGCIFRNNLLKLDRHVTMADDGGLQTLHVKNGRPG 179 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRR 225 D+ + +SYSG + A A ++G IT+ +DS L R Sbjct: 180 DLFLFLSYSGIHYDYSKYAAALSERGIKPCLITAFSDSALAR 221 >UniRef50_Q03FC5 Transcriptional regulator n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03FC5_PEDPA Length = 280 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 70/258 (27%), Positives = 124/258 (48%), Gaps = 12/258 (4%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L +SN +F+ +EQK+A F+ E+ +++ +++ + +S +++V+ A+K+ G Sbjct: 5 LFTLSNDFEKFSRSEQKVARFMIDYPREVIQMNAEEISDRTQVSPATVVRLAKKICKSGL 64 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 L++ + E L++ + D L+V+ KL A+ QT +L Sbjct: 65 PGLKIQVASEIKVDDS--------LYTEVNPSDDLDVMKHKLEFRISHAIGQTNQILLKN 116 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 ++K +++ +A I + G+G S LV D K ++IG V DTH+ A V A K Sbjct: 117 DVKKATDIVEQADDIYVFGMGASNLVAEDFQQKFIRIGKSVIQTLDTHLMA-VGLA-KPN 174 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETE--WR 241 V I +S SG KE A +IAIT +S + + + TL G R Sbjct: 175 SVLIVVSDSGETKESCHITRVASSLNIPIIAITHERNSTIAKNSTVTLTHDDGGESGVLR 234 Query: 242 SSSMSTRTAQNSVTDLLF 259 +++ ++ AQ V DLL+ Sbjct: 235 TAATTSLLAQLYVVDLLY 252 >UniRef50_D1TJG3 Putative transcriptional regulator, RpiR family n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TJG3_9BURK Length = 325 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 73/274 (26%), Positives = 134/274 (48%), Gaps = 10/274 (3%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 + +I+ E E+K+A + +++ S +A+Q +S +++ +FA+ +G + Sbjct: 42 VARIAECAPELRSAERKVAALILDDLTGASRASIGALAQQAEVSIATVTRFAKAVGCRDV 101 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 EL++ L + A + D+ E IA ++ E + AL LL A Sbjct: 102 RELKLRL--------AQAAAVGQRFLERDAASDAPEPIATRVFDELQTALAHNHQLLRQA 153 Query: 124 RLQKIIEVISKAPFIQITGLGG-SALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 L + + A I + G+GG S + ++ F+L+++G VA D +Q V+ + + Sbjct: 154 PLAEAAAALRNARMIYVFGMGGGSTALADEMRFRLVRLGRPVATYQDGLLQRMVASTVSR 213 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 V +A+S +G E+V + AR GATV+A+T+ SPL RLA + + V+ ET++ Sbjct: 214 DCVVVALSTTGRVPEMVENCKIARSYGATVVAVTAPA-SPLARLADWLIPIVAFETDFIY 272 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQR 276 S+R A D+L L ES ++++R Sbjct: 273 KPSSSRYAMMMALDVLVTELAVSQGDESRELLRR 306 >UniRef50_C2D3P4 RpiR family transcriptional regulator (Fragment) n=3 Tax=Lactobacillus RepID=C2D3P4_LACBR Length = 281 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 65/243 (26%), Positives = 111/243 (45%), Gaps = 6/243 (2%) Query: 18 EQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSAS 77 +KIA ++ N + +A S +S+ + + LG F E ++L Y+ Sbjct: 19 NKKIAKYVIDNPQAASEANIEDLAAVTETSTASVSRLVKTLGYSNFREFTLSL--AYTQL 76 Query: 78 REKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPF 137 R + L + I ++D+L IA K+ + AL+ T +D + + I Sbjct: 77 RPQN----LPIFKDIDANDTLSTIADKIFTSSQRALQDTREGIDENEFARSVLRIIHCRR 132 Query: 138 IQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKE 197 + GLGGS++ D K ++ D VQ + L + D I +S+SG ++ Sbjct: 133 LGFFGLGGSSVAALDGYHKFLRTSIDCFYYPDFDVQLMQAVKLGEDDCAIVVSHSGKNRQ 192 Query: 198 IVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDL 257 + AE +++ VIAITS DSPL + T + S E+ +RS M + AQ ++ D Sbjct: 193 TIKIAETLKRRKVPVIAITSYQDSPLVGHSDITFISSSDESNYRSEGMYSLLAQLTIIDT 252 Query: 258 LFV 260 LF+ Sbjct: 253 LFM 255 >UniRef50_C0DAS9 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DAS9_9CLOT Length = 290 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 63/232 (27%), Positives = 117/232 (50%), Gaps = 14/232 (6%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 Y+ +I + ++++++IA+++ + + S MA++ G S++ +F Q L +G Sbjct: 16 YIGRIKMQYASLSKSQKRIANYILNHREAVIHHSITTMAQKTGTVPSTVTRFCQALSYKG 75 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 F+E+++ + EK A+ L + + I D+L+V+ +KL + A++ T LD Sbjct: 76 FSEMKVYM--------EKNLASPLTMDALIQKTDTLQVVLQKLMNSSQNAIQDTMRTLDA 127 Query: 123 ARLQKIIEVISKAPFIQITGLGG---SALVGRDLSFKLMKIGYRVACEADTHVQATVSQA 179 L + ++ I A I + G G SA R L ++ + V D ++ A+ Sbjct: 128 RSLTEAVDAILAAGNILLFGQSGGYISATYARQLLLRINVLSQAVNDRVDANLAAST--- 184 Query: 180 LKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTL 231 LKKGDV I +YSG + ++ A+ AT I IT+ T+S + +LA L Sbjct: 185 LKKGDVAIGFAYSGEARSVIEALTTAKHNKATTIVITANTNSTMAKLADLKL 236 >UniRef50_A9BXM8 Transcriptional regulator, RpiR family n=16 Tax=cellular organisms RepID=A9BXM8_DELAS Length = 323 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 12/261 (4%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L L +I+ + EQ++A + A+ R++A++ +S+ ++V+F + +G Sbjct: 42 LMLDRITASLPSLAPAEQRVARLVLADPRAFARQPVRELAERAHVSKPTVVRFCRSMGYD 101 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDD-SLEVIARKLNREKELALEQTCALL 120 G + ++ L G S +H S+ +DD + +V+ + ++ L+ A Sbjct: 102 GLADFKLKLAGSVSEG-------VPFIHRSVDTDDKTSDVMVKVVDNAVAAFLQYRNAAS 154 Query: 121 DYARLQKIIEVISK---APFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVS 177 A Q + S I+ G G S +V +D K ++G +D H+Q + Sbjct: 155 TTAIEQAAQAIASTWQTGRRIEFYGAGNSGIVAQDAQHKFFRLGVTSLATSDGHMQVMSA 214 Query: 178 QALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGE 237 L GD + IS SG ++++ A+ ARK GAT IAIT+ + SPL H L E Sbjct: 215 TLLGPGDCAVIISNSGRTRDLMDAADIARKNGATTIAITA-SGSPLASACHIHLAADHPE 273 Query: 238 TEWRSSSMSTRTAQNSVTDLL 258 R S M +R V D+L Sbjct: 274 GYDRYSPMVSRLLHLLVIDVL 294 >UniRef50_C3RI81 Sugar isomerase n=1 Tax=Mollicutes bacterium D7 RepID=C3RI81_9MOLU Length = 296 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 63/260 (24%), Positives = 121/260 (46%), Gaps = 4/260 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 ML + K+ N + ++ E+ IA F+ EL S+R +A+ S +++++ +KL Sbjct: 1 MLIIEKL-NLKEKMSDGEESIAAFILTLGKELHKYSTRNIAEATLTSPATVIRLCKKLDF 59 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF + + + E + ++ + +D++ A K++ E + T LL Sbjct: 60 KGFDDFKEQFLKEINYLDQQYGKVDANF--PFNRNDTMMKTAHKISHLYEDTVTDTMTLL 117 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + LQK + ++ + I I G + + K++KIG V + + Q + Sbjct: 118 HHDDLQKALRLLKNSNSIHIFSTGTALNLAESFKEKMLKIGKNVVISNNLNYQLYEVSCI 177 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 KGD+ I ISYSG + A+ + +IAITS ++ L +LA L + E+ + Sbjct: 178 PKGDIAIIISYSGETINTIKIAQTCKNNKIPIIAITSFGENTLAKLASCKLTISTKESLY 237 Query: 241 RS-SSMSTRTAQNSVTDLLF 259 + ST A + + D+L+ Sbjct: 238 HNLGDFSTHLATHLMLDILY 257 >UniRef50_C3FD32 Phosphosugar-binding transcriptional regulator n=1 Tax=Bacillus thuringiensis serovar monterrey BGSC 4AJ1 RepID=C3FD32_BACTU Length = 294 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 60/248 (24%), Positives = 125/248 (50%), Gaps = 7/248 (2%) Query: 14 FTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGE 73 F+ +E +I +L ++ +++Q++K+ S++++ A+KLG G+ EL+ + +GE Sbjct: 12 FSPSESEIIVYLFKQRENIKDKTTKQISKETYTHPSTLIRIAKKLGYSGWVELKNSFLGE 71 Query: 74 YSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVIS 133 ++ +++ + DS+ +A K+ + + T +LL++ LQ+ ++ Sbjct: 72 --IEYLNSHFSSIDANYPFDDRDSIMTVANKMALLNQTTISDTLSLLNHDDLQRATNMLD 129 Query: 134 KAPFIQITGLGGSALVGRDLSFKLMKIGYRVA-CEADTHVQATVSQALKKGDVQIAISYS 192 +A I++ + + L+ D K+ +IG V+ C D H +A S I ISYS Sbjct: 130 EAAHIKVFSMYHNLLICHDFKSKMNRIGKHVSLCTVDPHFEAVNSNT---ETCAIVISYS 186 Query: 193 GSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW-RSSSMSTRTAQ 251 G ++IV +++ VIA+TS+ ++ L + A L + E + + S S+ + Sbjct: 187 GESEDIVGRLPFLKRKKVPVIALTSIGENTLTKYADCILRITTREKLYSKIGSFSSNESI 246 Query: 252 NSVTDLLF 259 + DLL+ Sbjct: 247 CFLLDLLY 254 >UniRef50_UPI0001BCD92E RpiR family transcriptional regulator n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCD92E Length = 288 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 70/271 (25%), Positives = 133/271 (49%), Gaps = 19/271 (7%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L KI + + E+++AD++ N +++ ++ +A G S +++V+F +K G GF Sbjct: 8 LEKIFSIYPVLFDAEKRLADYVLQNEAKVVDMTVSDLAAACGTSDATVVRFCKKCGCNGF 67 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 L++ + E + K + A + S+ ++V R + K+ L QT A +D A Sbjct: 68 HHLKINMAKEMAT---KPSDGAPIVGSNELDCARMDVSLRNIFASKQEELRQTLAEIDPA 124 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL--- 180 + ++E I A FI +G + V D ++K ++G T + A V + + Sbjct: 125 VFRSVVERIRAARFIFCAAMGNTIPVAMDAAYKFNELGL-------TAISAPVWENMLAM 177 Query: 181 ----KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSG 236 DV +AIS SG K+++ AAR +GA ++ +T+ S + R++ L VS Sbjct: 178 MHTATPDDVLLAISASGETKDLMRIVSAARGRGAYIVLVTNQVHSSIARVSDRVLHAVSQ 237 Query: 237 E-TEWRSSSM-STRTAQNSVTDLLFVGLVQL 265 E +R+ S STR + +V + ++ L+ + Sbjct: 238 ERMFFRTFSFSSTRLSMTAVIEAVYYMLLSV 268 >UniRef50_Q03Q61 Transcriptional regulator n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03Q61_LACBA Length = 286 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 117/262 (44%), Gaps = 18/262 (6%) Query: 6 KISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTE 65 KI + + E+K+A + + ++ +++A G+S ++I +F +++ + E Sbjct: 8 KIRGTYDQLSRTEKKVAQMALNTPAVVSEMTIKELASATGVSTATISRFVKRMDYANYRE 67 Query: 66 LRMALI-------GEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCA 118 MAL GE+ +S + + DSL IA K +LE T Sbjct: 68 FTMALAHLAIEDGGEHQSSFPE-----------LAEGDSLATIANKTFHYTISSLEATNE 116 Query: 119 LLDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQ 178 L L + + + A + GLGGS++ D K ++ V D +Q + Sbjct: 117 ALSEKDLARAVLKLINAEKVTFFGLGGSSIAALDGYHKFLRTALSVTYYPDFDIQLMQAA 176 Query: 179 ALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGET 238 L D + IS+SG E + E ++ ++IAITS + SPL + A T +++ E Sbjct: 177 RLSDQDCAVVISHSGRNSETLQVVEELQRNDVSIIAITSYSGSPLAQAADVTFLSLTDEV 236 Query: 239 EWRSSSMSTRTAQNSVTDLLFV 260 +RS M + +Q ++ D LF+ Sbjct: 237 NYRSEGMYSLISQLAILDTLFM 258 >UniRef50_B9B6B2 Transcriptional regulator, RpiR family n=3 Tax=Burkholderia multivorans RepID=B9B6B2_9BURK Length = 311 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 67/260 (25%), Positives = 117/260 (45%), Gaps = 6/260 (2%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 ++ I + +E K+ + L ++ + + ++ Q+A + G+S ++++ A+ LG G Sbjct: 36 WIGSIQARSGDLAASEAKVVELLLSDPLFVGASTTAQVAARAGVSPPTVIRAARALGFTG 95 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 FTEL++ + +R + A +T+D S + R AL ++ Sbjct: 96 FTELKIEI------ARARGTARFFAPPEVLTADASSAAVLETSIRTGVDALSALSGAIEI 149 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 A L K + I +A + G G SA V D F+L +G D ++ L Sbjct: 150 AALDKAVASIQQARQVFAFGAGPSATVAADAVFRLRAVGVTTVGIPDYLSAMIAARLLGP 209 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 GDV IA+S +G + A+AA GAT++A+T+ +PL LA L + Sbjct: 210 GDVVIAVSSTGRTSSTLAVADAASSAGATLVAVTNQYGTPLANLADIALVVGGAPLPAQM 269 Query: 243 SSMSTRTAQNSVTDLLFVGL 262 ++ +R AQ V D L L Sbjct: 270 AAAGSRLAQLVVIDALVAAL 289 >UniRef50_C3RJC3 Sugar isomerase n=5 Tax=Bacteria RepID=C3RJC3_9MOLU Length = 291 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 58/234 (24%), Positives = 113/234 (48%), Gaps = 10/234 (4%) Query: 11 GSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMAL 70 ++F+ +E+ + DF+ ++ S+ +A + S S +V+ ++KLG G+ + A Sbjct: 3 NTKFSPSEEIVIDFILTKQERIKDYSTTMIAGETYTSPSLLVRISKKLGFSGYNNFKNAF 62 Query: 71 IGEYSA-SREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKII 129 + E + N A + DS+ IA K+ + K +L T +L+ + LQK + Sbjct: 63 LEEVQYLHKSHLNIDA---NQPFLKTDSIMNIANKITQLKTESLNDTLSLIHHDTLQKAV 119 Query: 130 EVISKAPFIQITGLGGSALVGRDLSFKLMKIGYR---VACEADTHVQATVSQALKKGDVQ 186 + K+ +++ G+ + + FKL IG ++ + +A ++ + D+ Sbjct: 120 RALQKSNTVKVFGVSNLSFPAEEFVFKLRHIGKNAEVFVLNSNIYQEAMMANS---NDLG 176 Query: 187 IAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 I +SYSG EI+ A +K+ +IAITS+ ++ L RLA L + E + Sbjct: 177 ICLSYSGESGEIIKIANILKKKNVPIIAITSIGENSLTRLADIVLRVTTREKSY 230 >UniRef50_C0C1I3 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C1I3_9CLOT Length = 288 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 69/269 (25%), Positives = 129/269 (47%), Gaps = 17/269 (6%) Query: 18 EQKIADF--LQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYS 75 E+K AD+ L + L S+ + + A + G S+++ V+ AQKLG G+ +L+ L+ + Sbjct: 23 ERKAADYVLLHPQEAALHSIIT-ESAGRAGCSEATFVRLAQKLGYNGYAQLKQMLLPAEA 81 Query: 76 ASREKTNATALHLHSSI-TSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIE---- 130 A +T L + I +DS V+ + A + +K+ E Sbjct: 82 AFEPET----LLPYGDIGRGEDSQAVLCSVFH-----AAARALDDTLDLLDRKVYEESLS 132 Query: 131 VISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAIS 190 I++A I G G + K +IG R C AD VQ + +K+GDV + IS Sbjct: 133 YITRAGKILSAGAGDAYTAAYSAYLKFSRIGLRAVCPADFDVQIMEASGMKRGDVLLLIS 192 Query: 191 YSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTA 250 +SGS + + AE A+ + A +I +T+ SPL +L+ + T + + +++ R Sbjct: 193 HSGSTRTLCQVAETAKAKKARIITVTNYPLSPLAKLSDCVIRTAAFTKNPCNETVAKRIP 252 Query: 251 QNSVTDLLFVGLVQLNDVESLKMIQRSSE 279 + + + L++ ++Q + + KM+ ++E Sbjct: 253 ELCIIEALYISILQGREEKYAKMLAAANE 281 >UniRef50_A0JVW9 Transcriptional regulator, RpiR family n=2 Tax=Actinomycetales RepID=A0JVW9_ARTS2 Length = 309 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/261 (23%), Positives = 125/261 (47%), Gaps = 5/261 (1%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L +IS + +++A+ + + + Q+++ ++A G+ +S++ +F ++LG G+ Sbjct: 11 LHRISGRLPYLPPSLRQVAEAVLKSPEQAQTMTISELAVAAGVGESTVSRFVKELGIDGY 70 Query: 64 TELRMALIGEYSASREKTNATALH---LHSSITSDDSLEVIARKLNREKELALEQTCALL 120 + + L S+ T+A ++ + D+ IA K+ R +L +T Sbjct: 71 KSMLLGLAEATFISKAATSARTADSEVVYEGVNRGDTAAEIAGKVERSSVQSLRRTGQRQ 130 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D +Q+ +++I + + + +G S++ + + + G + DT +Q ++ + Sbjct: 131 DVEAIQRAVDLIDASNTVIFSCMGSSSIAAEEAVMRFTRAGKKCMLYRDTTIQVMLAAII 190 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTL--DTVSGET 238 + GD+ I IS SG I+ AR++GA IAIT SPLR A L TV Sbjct: 191 EPGDLLIGISDSGRSTPIIDAMHLARQRGAATIAITGAEGSPLRNYADVVLYTATVPSGG 250 Query: 239 EWRSSSMSTRTAQNSVTDLLF 259 E S++++ Q V D+L+ Sbjct: 251 ELYGESVTSKWGQLLVIDILY 271 >UniRef50_C6VMT8 Transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VMT8_LACPJ Length = 282 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 74/270 (27%), Positives = 126/270 (46%), Gaps = 14/270 (5%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG- 62 L I N F++ EQKI ++ + + + +S+ ++A G+S +++ +F + L G Sbjct: 5 LFTIHNRLENFSKAEQKIGRYILDHTNAVIKMSTAELAAATGVSTATVARFGKTLIPDGG 64 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 + L++ L E + + L+ I DSL+ I KL +++T LD Sbjct: 65 YPALKLRLSAESTVDQT--------LYDEINPKDSLDAIKSKLALRITHTIDETNRSLDD 116 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 A LQ ++I+ + + GLG S +V D K ++IG V D H+ A ++ Sbjct: 117 AALQAASQLIADKASVYVYGLGASNVVATDFEQKFIRIGKAVIHSQDPHLLAVGMTTQRQ 176 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTL---DTVSGETE 239 V + IS SG K E + A A VI ++ S L +LA L D+ +T Sbjct: 177 NVVLLLISNSGEKSESIRLANLAHSINVPVIVLSRNATSTLGKLADIILINDDSEENQT- 235 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVE 269 R+++ ++ AQ V DLL+ + ND E Sbjct: 236 ARAAATTSLMAQLYVVDLLYYTFIT-NDYE 264 >UniRef50_C8SX74 Transcriptional regulator, RpiR family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SX74_9RHIZ Length = 314 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 68/273 (24%), Positives = 129/273 (47%), Gaps = 12/273 (4%) Query: 7 ISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTEL 66 + ++ SE E+++AD + +V S+ +A++ G+S+ ++ +F + +G +G + Sbjct: 32 VKDSYSELRRAERRVADVVLDDVKYAVDASNAALAQRAGVSEPTVTRFCRAIGCEGLRDF 91 Query: 67 RMALIGEYSASREKTNATALHLHSSIT--SDDSLEVIARKLNREKELALEQTCALLDYAR 124 ++ L + AL+L S S + + E AL++ LD Sbjct: 92 KLKLA-------QSLVVGALYLAKSPAPGSGNGMPFWNAVFG-EARRALQEAERQLDPVE 143 Query: 125 LQKIIEVISKAPFIQITGLGGSA-LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 LQK E+I+KA + + GLGGS+ + ++ ++L + G V + D ++ + LK G Sbjct: 144 LQKAAELIAKARQVTVFGLGGSSSALAQETQYRLFRYGITVNAQCDPYLMRMTASTLKPG 203 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 D+ IAIS +G +E++ E A+ A I +T+ D+ L R L E Sbjct: 204 DLVIAISATGRTREVIEAVELAKHYRANAIGVTA-PDTELARACDVRLAVAVPEYPDTLK 262 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQR 276 ++R A ++ DLL V D + + ++R Sbjct: 263 PTASRYAFLAMIDLLAVASAYKLDASARETVRR 295 >UniRef50_Q9WYG1 Uncharacterized HTH-type transcriptional regulator TM_0326 n=7 Tax=Thermotogaceae RepID=Y326_THEMA Length = 280 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 70/263 (26%), Positives = 127/263 (48%), Gaps = 7/263 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGI-SQSSIVKFAQKLG 59 M + +I EFT E+KIAD + ++ + S ++++ G+ S++S+VKF +KLG Sbjct: 1 MDVIQRIKEKYDEFTNAEKKIADTILSDPKGIIESSISDLSEKAGVKSEASVVKFYKKLG 60 Query: 60 AQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCAL 119 F + ++ L S SR A ++ ++S+D + I K+ + A+ T Sbjct: 61 LNSFQQFKVLL--AQSISR----APLEIVYEDVSSEDDTKTITEKIFKATVRAILDTLNW 114 Query: 120 LDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQA 179 LD +++ +++ A I G SA V D K +IG D H+ A + Sbjct: 115 LDIDSIERTVDLFKNAQRIIFIGFAASAAVAFDAFHKFTRIGKNCLFSNDEHIIAAILAT 174 Query: 180 LKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETE 239 D+ +AIS++G +V A+ A++ V+ IT S L + + L T + ET+ Sbjct: 175 ASPSDLLVAISHTGETISVVNFAKKAKEMKMPVVTITGNRKSTLAKYSDVVLATNTKETK 234 Query: 240 WRSSSMSTRTAQNSVTDLLFVGL 262 R+ +M++R Q + D ++ L Sbjct: 235 IRTDAMTSRIVQLVILDTIYTLL 257 >UniRef50_Q03CT7 Transcriptional regulator n=7 Tax=Lactobacillus RepID=Q03CT7_LACC3 Length = 289 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 69/260 (26%), Positives = 130/260 (50%), Gaps = 20/260 (7%) Query: 12 SEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALI 71 SE +E E+KI D++ A+ + ++S +AK G S +S+ + A++L G+ EL+M L Sbjct: 12 SELSETEKKIVDYVMAHSQAVLTMSVHDLAKAAGTSPASVSRAARRLQFSGYNELKMQLA 71 Query: 72 GEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEV 131 + +++ + ++++T+ I +KL + +L +T ++ A + II + Sbjct: 72 ADLKGDTNQSDDQEIQKNATLTT------IKQKLLIDANQSLRETVDQINEANVDTIINL 125 Query: 132 ISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHV------QATVSQALKKGDV 185 I ++ + + G+G S L ++++ K ++GY D ++ A V Q L Sbjct: 126 IHQSDRLLVFGVGASYLAAQNIAQKWGRLGYPCHFSDDLNLFLPLAATADVEQTLC---- 181 Query: 186 QIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSM 245 IS SG E+VL A+ A+K G VI T L + L + A ++ T S E R+ Sbjct: 182 -WFISNSGESPEVVLAAKLAKKAGLQVIVTTKLGKNSLTKYADVSIQT-SQPMEARNRFA 239 Query: 246 STRT--AQNSVTDLLFVGLV 263 +T++ Q + D+L+ V Sbjct: 240 ATQSLHTQFMLIDILYYAYV 259 >UniRef50_A8RCR9 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RCR9_9FIRM Length = 289 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 62/263 (23%), Positives = 130/263 (49%), Gaps = 10/263 (3%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 LT+I + +++EQK+ +++ + ++ +S+ +++ IS+ ++++F ++LG QG+ Sbjct: 7 LTRIESLMPFLSKSEQKLGNYILTHPKDVTDMSTSALSQACDISEPTLIRFTRRLGFQGY 66 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 + ++ L + +++ + ++L +D ++E I RKL +L T LD Sbjct: 67 KDFKLHLSANFISNQIDSTPVKVNL-----NDSAIE-IYRKLASFTINSLNSTLNTLDAN 120 Query: 124 RLQKIIEVISKAPF----IQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQA 179 L+ I A I ++G+G S ++ + K+M++ + D H++ Sbjct: 121 DLENATNYIYVAAKQNRKIFLSGMGASTVLIHEFQIKMMRLNIQTIFFEDIHLRLEACAN 180 Query: 180 LKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETE 239 LKK D+ I + G+ KE + A ++ A +I IT +S + A L T E Sbjct: 181 LKKNDLFICFTTLGASKENYELIDIAHERKAKIIVITQFGNSQIAEKADIALYTSIIENN 240 Query: 240 WRSSSMSTRTAQNSVTDLLFVGL 262 R +S ++ Q+ V D+LF+ + Sbjct: 241 LRLASQTSIILQSMVIDVLFLTI 263 >UniRef50_B7C842 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C842_9FIRM Length = 276 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 73/286 (25%), Positives = 134/286 (46%), Gaps = 13/286 (4%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + L I + F ++E+KIAD++ + E+ +++ +Q+A+ SQ+S+ +FA+K Sbjct: 1 MILDTIHGHYNSFFDSEKKIADYIIQHPKEVVNMTIKQLAQACNTSQASVSRFARKCQMD 60 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSD--DSLEVIARKLNREKELALEQTCAL 119 F L++ L +R+ N ++ TSD SLE I N+ EL T Sbjct: 61 SFHHLKVNL------ARDCVNEIEQKSNTISTSDISGSLETILS--NKISELT--ATIRN 110 Query: 120 LDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQA 179 +D + I+ +I A + + +G + V D FK +IG Q + + Sbjct: 111 IDVDQFSVILSLIQNAKHVLVCAVGNTVPVALDCMFKFNEIGILTFTSTIWENQVSYALG 170 Query: 180 LKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETE 239 L DV IAIS SG +++ + +K+G I IT+ DS + + + + T + E Sbjct: 171 LDSNDVVIAISNSGESSQVLAVCKEMKKRGVPTIGITNNEDSVVAKECVYHIQTSTREKL 230 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + + +R + ++ ++L++ L +D S I + EL LK Sbjct: 231 FLNEFCFSRISAATIIEILYLFLTNASD-NSYDRISQCEELYASLK 275 >UniRef50_C7XVK6 6-phospho 3-hexuloisomerase n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XVK6_9LACO Length = 280 Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 51/229 (22%), Positives = 114/229 (49%), Gaps = 15/229 (6%) Query: 39 QMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSL 98 ++A Q G+ +++ +F +++G + F + ++AL+ + RE ++++ + + Sbjct: 36 ELANQAGVGVATVSRFTKRVGCKNFADFKLALVTPDTMQRES--------EQNVSTPNDI 87 Query: 99 EVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLM 158 +K+ L +T A++ +L++ +I A + + G+G S ++ + +LM Sbjct: 88 HNYYQKI-------LAETMAMVSTKQLRQAANLIHGAKRVYVFGIGSSGYNAQEFAQRLM 140 Query: 159 KIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSL 218 ++G ++++ S ++ D+ IA+S SGS E+ +RK GAT+IA+T+ Sbjct: 141 RMGKPAFAMTESNMMTIASATMQDNDIVIALSVSGSTPEVCSAVRDSRKNGATIIAVTAF 200 Query: 219 TDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDLLFVGLVQLND 267 +S L +++ S E ++++ A V D+L L+Q D Sbjct: 201 KNSLLGKMSDLLFQIKSTELVGDYDFINSQFAVTYVIDMLTQMLLQFTD 249 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A9MIE1 HTH-type transcriptional regulator murR n=48 Tax... 313 6e-84 UniRef50_D2AGN5 Transcriptional regulator, RpiR family n=1 Tax=S... 310 4e-83 UniRef50_C7MQM6 Transcriptional regulator, RpiR family n=5 Tax=A... 296 5e-79 UniRef50_Q8R7I8 Transcriptional regulator n=3 Tax=Firmicutes Rep... 291 2e-77 UniRef50_A4F6M8 RpiR-family transcriptional regulator n=7 Tax=Ac... 290 3e-77 UniRef50_C6WFA6 Transcriptional regulator, RpiR family n=2 Tax=A... 290 4e-77 UniRef50_UPI0001788119 transcriptional regulator, RpiR family n=... 286 5e-76 UniRef50_A0KFB6 Transcriptional regulator, RpiR family n=3 Tax=G... 284 3e-75 UniRef50_A1HSQ6 Transcriptional regulator, RpiR family n=1 Tax=T... 281 2e-74 UniRef50_C0ZD50 Transcriptional regulator n=32 Tax=Bacillales Re... 281 2e-74 UniRef50_Q8RD36 Uncharacterized HTH-type transcriptional regulat... 280 3e-74 UniRef50_C6J1X3 RpiR family transcriptional regulator n=2 Tax=Ba... 275 8e-73 UniRef50_C6Q8T9 Transcriptional regulator, RpiR family n=1 Tax=T... 275 1e-72 UniRef50_C0CSK7 Putative uncharacterized protein n=1 Tax=Blautia... 274 2e-72 UniRef50_B8E0M8 Transcriptional regulator, RpiR family n=2 Tax=D... 273 4e-72 UniRef50_UPI000196C77F hypothetical protein CATMIT_02718 n=1 Tax... 273 4e-72 UniRef50_Q97MK5 Uncharacterized HTH-type transcriptional regulat... 272 1e-71 UniRef50_A7GD47 Transcriptional regulator, RpiR family n=10 Tax=... 272 1e-71 UniRef50_C0ZJF9 Transcriptional regulator n=1 Tax=Brevibacillus ... 272 1e-71 UniRef50_A8LV24 Transcriptional regulator, RpiR family n=7 Tax=A... 270 4e-71 UniRef50_A8S9N1 Putative uncharacterized protein n=3 Tax=Bacteri... 270 5e-71 UniRef50_C4L752 Transcriptional regulator, RpiR family n=4 Tax=B... 269 8e-71 UniRef50_C4V1J5 RpiR family transcriptional regulator n=1 Tax=Se... 267 3e-70 UniRef50_A8FJ30 Possible RpiR family transcriptional regulator n... 267 4e-70 UniRef50_C4G9W4 Putative uncharacterized protein n=1 Tax=Shuttle... 266 5e-70 UniRef50_C0Z7S3 Transcriptional regulator n=1 Tax=Brevibacillus ... 266 6e-70 UniRef50_C5C2G7 Transcriptional regulator, RpiR family n=1 Tax=B... 266 7e-70 UniRef50_UPI000197C448 transcriptional regulator n=1 Tax=Provide... 265 1e-69 UniRef50_C3WE65 Transcriptional regulator n=5 Tax=Fusobacterium ... 265 1e-69 UniRef50_UPI0001693BD8 YbbH n=1 Tax=Paenibacillus larvae subsp. ... 265 2e-69 UniRef50_C6D7K6 Transcriptional regulator, RpiR family n=1 Tax=P... 265 2e-69 UniRef50_Q4LA29 Similar to transcriptional regulator n=1 Tax=Sta... 265 2e-69 UniRef50_C5CIM2 Transcriptional regulator, RpiR family n=1 Tax=K... 264 2e-69 UniRef50_P44540 Uncharacterized HTH-type transcriptional regulat... 264 2e-69 UniRef50_B5I8T9 Sugar isomerase n=1 Tax=Streptomyces sviceus ATC... 263 3e-69 UniRef50_D2AR91 Putative transcriptional regulator, RpiR family ... 263 4e-69 UniRef50_A8RRF4 Putative uncharacterized protein n=5 Tax=Clostri... 263 4e-69 UniRef50_C6J4B4 Transcriptional regulator n=1 Tax=Paenibacillus ... 263 5e-69 UniRef50_B2TJ91 Transcriptional regulator, RpiR family n=1 Tax=C... 262 8e-69 UniRef50_A9KIQ0 Transcriptional regulator, RpiR family n=1 Tax=C... 262 9e-69 UniRef50_A5L3V2 Transcriptional regulator, RpiR family protein n... 262 1e-68 UniRef50_C4DDH7 Transcriptional regulator, RpiR family n=1 Tax=S... 261 2e-68 UniRef50_A9KMQ5 Transcriptional regulator, RpiR family n=1 Tax=C... 261 2e-68 UniRef50_B4EZY5 RpiR-family transcriptional regulator n=54 Tax=G... 261 3e-68 UniRef50_C1PDB4 Transcriptional regulator, RpiR family n=1 Tax=B... 260 3e-68 UniRef50_C2D8M2 Possible transcriptional regulator n=1 Tax=Atopo... 260 4e-68 UniRef50_D1YCB1 Transcriptional regulator, RpiR family n=3 Tax=P... 260 4e-68 UniRef50_A6LRF3 Transcriptional regulator, RpiR family n=2 Tax=B... 260 5e-68 UniRef50_B1YJ20 Transcriptional regulator, RpiR family n=1 Tax=E... 258 2e-67 UniRef50_A4TMJ1 RpiR-family transcriptional regulatory protein n... 258 2e-67 UniRef50_B6ITC5 HTH-type transcriptional regulator hexR, putativ... 258 2e-67 UniRef50_A6LUR0 Transcriptional regulator, RpiR family n=2 Tax=C... 258 2e-67 UniRef50_A8RI47 Putative uncharacterized protein n=1 Tax=Clostri... 257 3e-67 UniRef50_Q9CKN4 Putative uncharacterized protein n=1 Tax=Pasteur... 257 3e-67 UniRef50_A6LVH8 Transcriptional regulator, RpiR family n=8 Tax=F... 257 4e-67 UniRef50_B0N1V0 Putative uncharacterized protein n=2 Tax=Bacteri... 256 7e-67 UniRef50_C9AZQ1 Phosphosugar isomerase transcriptional regulator... 255 9e-67 UniRef50_C8W838 Transcriptional regulator, RpiR family n=1 Tax=A... 255 9e-67 UniRef50_C0D6A5 Putative uncharacterized protein n=1 Tax=Clostri... 255 1e-66 UniRef50_C6XNZ1 Transcriptional regulator, RpiR family n=1 Tax=H... 254 2e-66 UniRef50_UPI0001789683 transcriptional regulator, RpiR family n=... 254 2e-66 UniRef50_C2L140 RpiR family transcriptional regulator n=6 Tax=Cl... 252 8e-66 UniRef50_C8NZR0 RpiR family transcriptional regulator n=1 Tax=Er... 252 9e-66 UniRef50_Q45581 Uncharacterized HTH-type transcriptional regulat... 251 2e-65 UniRef50_C4FUK3 Putative uncharacterized protein n=1 Tax=Catonel... 251 2e-65 UniRef50_A1JQZ2 RpiR family regulatory protein n=12 Tax=Enteroba... 251 2e-65 UniRef50_C3RKW6 Sugar isomerase n=3 Tax=Bacteria RepID=C3RKW6_9MOLU 250 3e-65 UniRef50_Q1LPJ6 Transcriptional regulator, RpiR family n=6 Tax=B... 249 7e-65 UniRef50_C6L9A2 Transcriptional regulator, RpiR family n=1 Tax=B... 248 1e-64 UniRef50_A7VQA6 Putative uncharacterized protein n=1 Tax=Clostri... 248 2e-64 UniRef50_Q2G836 Transcriptional regulator, RpiR family n=4 Tax=P... 247 3e-64 UniRef50_B6GA31 Putative uncharacterized protein n=1 Tax=Collins... 247 3e-64 UniRef50_C4KZ09 Transcriptional regulator, RpiR family n=85 Tax=... 247 4e-64 UniRef50_A8FIY5 Possible RpiR family transcriptional regulator n... 247 4e-64 UniRef50_UPI000196C511 hypothetical protein CATMIT_02677 n=1 Tax... 247 5e-64 UniRef50_D1ALE3 Transcriptional regulator, RpiR family n=1 Tax=S... 246 5e-64 UniRef50_A4VXR0 Transcriptional regulator n=5 Tax=Streptococcus ... 246 6e-64 UniRef50_A4EAC5 Putative uncharacterized protein n=2 Tax=Collins... 246 7e-64 UniRef50_A8RWE9 Putative uncharacterized protein n=1 Tax=Clostri... 246 8e-64 UniRef50_A1AYM0 Transcriptional regulator, RpiR family n=3 Tax=P... 245 1e-63 UniRef50_B5HLI6 RpiR-family transcriptional regulator n=3 Tax=St... 245 1e-63 UniRef50_D0W145 Transcriptional regulator HexR n=3 Tax=Neisseria... 245 2e-63 UniRef50_C2C2H3 Bifunctional RpiR family transcriptional regulat... 245 2e-63 UniRef50_D1AUV3 Transcriptional regulator, RpiR family n=5 Tax=B... 244 3e-63 UniRef50_Q9K6Z8 Transcriptional regulator (Hex regulon repressor... 244 3e-63 UniRef50_A9M040 RpiR/YebK/YfhH family transcriptional regulator ... 244 3e-63 UniRef50_A0AJB4 Complete genome n=7 Tax=Bacillales RepID=A0AJB4_... 243 4e-63 UniRef50_D0GPL3 Transcriptional regulator, RpiR family n=1 Tax=L... 243 5e-63 UniRef50_D2PUN7 Transcriptional regulator, RpiR family n=1 Tax=K... 243 6e-63 UniRef50_C3RM33 Sugar isomerase n=2 Tax=Bacteria RepID=C3RM33_9MOLU 243 6e-63 UniRef50_C2D3P4 RpiR family transcriptional regulator (Fragment)... 242 8e-63 UniRef50_C0D4M2 Putative uncharacterized protein n=1 Tax=Clostri... 242 1e-62 UniRef50_B5FDJ7 Transcriptional regulator, RpiR family protein n... 241 1e-62 UniRef50_C1I531 Transcriptional regulator n=1 Tax=Clostridium sp... 241 2e-62 UniRef50_B9K581 Transcriptional repressor of rpiB expression; tr... 241 2e-62 UniRef50_C2D9G3 RpiR family transcriptional regulator n=1 Tax=At... 241 3e-62 UniRef50_Q184N2 Putative phosphosugar-binding transcriptional re... 240 3e-62 UniRef50_Q1QSE2 Transcriptional regulator, RpiR family n=28 Tax=... 240 3e-62 UniRef50_A8F3D9 Transcriptional regulator, RpiR family n=1 Tax=T... 240 5e-62 UniRef50_A9BXM8 Transcriptional regulator, RpiR family n=16 Tax=... 240 6e-62 UniRef50_Q04DU1 Transcriptional regulator n=2 Tax=Oenococcus oen... 239 7e-62 UniRef50_C4L7F8 Transcriptional regulator, RpiR family n=2 Tax=G... 239 7e-62 UniRef50_C2D9S0 RpiR family transcriptional regulator n=1 Tax=At... 239 1e-61 UniRef50_Q3JNN8 Transcriptional regulator, RpiR family n=54 Tax=... 238 1e-61 UniRef50_Q38YX9 Gluconate operon transcriptional regulator, RpiR... 238 2e-61 UniRef50_D1AG49 Transcriptional regulator, RpiR family n=1 Tax=S... 238 2e-61 UniRef50_P46118 HTH-type transcriptional regulator hexR n=302 Ta... 238 2e-61 UniRef50_C1XRD4 Transcriptional regulator n=1 Tax=Meiothermus si... 237 3e-61 UniRef50_C3JIB3 RpiR-family transcriptional regulator n=2 Tax=Rh... 236 4e-61 UniRef50_B7RYI4 Transcriptional regulator, RpiR family protein n... 236 4e-61 UniRef50_C8NHI8 Probable transcriptional regulator YbbH n=1 Tax=... 236 5e-61 UniRef50_C5C1Y9 Transcriptional regulator, RpiR family n=1 Tax=B... 236 5e-61 UniRef50_C9L6X6 Transcriptional regulator, RpiR family n=1 Tax=B... 236 6e-61 UniRef50_B9CM70 Transcriptional regulator, RpiR family n=1 Tax=A... 236 9e-61 UniRef50_P37767 Uncharacterized HTH-type transcriptional regulat... 235 1e-60 UniRef50_C7REF2 Transcriptional regulator, RpiR family n=2 Tax=A... 235 1e-60 UniRef50_P26833 Uncharacterized HTH-type transcriptional regulat... 235 1e-60 UniRef50_C2JLW7 Bifunctional RpiR family transcriptional regulat... 235 1e-60 UniRef50_Q02VU4 Transcriptional regulator n=4 Tax=Lactococcus la... 235 2e-60 UniRef50_C5BVH6 Transcriptional regulator, RpiR family n=2 Tax=A... 235 2e-60 UniRef50_Q2JBJ8 Transcriptional regulator, RpiR family n=1 Tax=F... 235 2e-60 UniRef50_A0JVW9 Transcriptional regulator, RpiR family n=2 Tax=A... 235 2e-60 UniRef50_B5GNW3 RpiR-family transcriptional regulator n=14 Tax=S... 234 2e-60 UniRef50_B1QW74 Transcriptional regulator n=2 Tax=Clostridium bu... 234 3e-60 UniRef50_Q9WYG1 Uncharacterized HTH-type transcriptional regulat... 234 3e-60 UniRef50_B8KWX3 Bifunctional protein glk n=3 Tax=unclassified Ga... 234 3e-60 UniRef50_C6VNS3 Transcription regulator n=3 Tax=Lactobacillus pl... 233 4e-60 UniRef50_A6UCC0 Transcriptional regulator, RpiR family n=4 Tax=P... 233 5e-60 UniRef50_A5EB66 Transcriptional regulator, RpiR family n=1 Tax=B... 233 6e-60 UniRef50_A8UCF6 Phosphosugar-binding transcriptional regulator, ... 233 7e-60 UniRef50_C6JFM8 Transcriptional regulator n=2 Tax=Clostridiales ... 233 7e-60 UniRef50_C0R285 Transcriptional regulator n=1 Tax=Brachyspira hy... 233 7e-60 UniRef50_Q6AH41 Transcriptional regulator, RpiR family n=1 Tax=L... 232 8e-60 UniRef50_C5CG85 Transcriptional regulator, RpiR family n=1 Tax=K... 231 2e-59 UniRef50_Q7MD38 Transcriptional regulator n=31 Tax=Gammaproteoba... 231 2e-59 UniRef50_B7GUA9 Transcriptional regulator, RpiR family n=7 Tax=B... 231 2e-59 UniRef50_A9BH25 Transcriptional regulator, RpiR family n=1 Tax=P... 231 3e-59 UniRef50_C1PED1 Transcriptional regulator, RpiR family n=1 Tax=B... 230 4e-59 UniRef50_C0X1P6 Transcriptional regulator RpiR n=21 Tax=Enteroco... 230 4e-59 UniRef50_C0C246 Putative uncharacterized protein n=2 Tax=Clostri... 230 5e-59 UniRef50_A8SDH7 Putative uncharacterized protein n=1 Tax=Faecali... 229 7e-59 UniRef50_UPI00016945F6 hypothetical protein Plarl_13824 n=1 Tax=... 229 7e-59 UniRef50_Q03Q61 Transcriptional regulator n=1 Tax=Lactobacillus ... 229 8e-59 UniRef50_Q2J8J9 Transcriptional regulator, RpiR family n=1 Tax=F... 229 8e-59 UniRef50_A9NEV7 Transcriptional regulator, RpiR family n=1 Tax=A... 229 1e-58 UniRef50_A2RL41 Transcriptional regulator, RpiR family n=4 Tax=L... 229 1e-58 UniRef50_Q03YQ8 Transcriptional regulator n=4 Tax=Leuconostocace... 228 1e-58 UniRef50_C0CU66 Putative uncharacterized protein n=2 Tax=Clostri... 228 2e-58 UniRef50_B0NYS8 Putative uncharacterized protein n=2 Tax=Clostri... 227 3e-58 UniRef50_A8RZI5 Putative uncharacterized protein n=1 Tax=Clostri... 227 3e-58 UniRef50_B6G0W9 Putative uncharacterized protein n=1 Tax=Clostri... 227 3e-58 UniRef50_Q03CI3 Transcriptional regulator n=10 Tax=Lactobacillac... 227 4e-58 UniRef50_A8RDU7 Putative uncharacterized protein n=1 Tax=Eubacte... 226 5e-58 UniRef50_Q040R4 Transcriptional regulator n=8 Tax=Lactobacillus ... 226 5e-58 UniRef50_C5EPZ9 Transcriptional regulator n=2 Tax=Clostridiales ... 226 7e-58 UniRef50_C2H8J8 Bifunctional RpiR family transcriptional regulat... 226 7e-58 UniRef50_A8UBX8 Phosphosugar-binding transcriptional regulator, ... 226 7e-58 UniRef50_C0X6G8 RpiR family transcriptional regulator n=23 Tax=E... 225 1e-57 UniRef50_B9DJX2 Putative RpiR family transcriptional regulator n... 225 1e-57 UniRef50_C0X148 RpiR family transcriptional regulator n=22 Tax=E... 225 1e-57 UniRef50_Q13K65 Transcriptional regulator, RpiR family n=7 Tax=B... 225 2e-57 UniRef50_B1R0U2 Transcriptional regulator, RpiR family n=9 Tax=F... 225 2e-57 UniRef50_D0DKU0 Transcriptional regulator n=1 Tax=Lactobacillus ... 225 2e-57 UniRef50_P0ACS8 HTH-type transcriptional regulator rpiR n=34 Tax... 225 2e-57 UniRef50_UPI00017F2FF2 transcriptional regulator n=1 Tax=Escheri... 224 2e-57 UniRef50_D0R5V5 Transcriptional regulator n=10 Tax=Lactobacillus... 224 3e-57 UniRef50_D0KLH9 Transcriptional regulator, RpiR family n=1 Tax=P... 224 3e-57 UniRef50_Q28KP3 Transcriptional regulator, RpiR family n=6 Tax=A... 223 4e-57 UniRef50_A4WDW6 Transcriptional regulator n=10 Tax=Enterobacteri... 223 6e-57 UniRef50_C3RHA3 Transcriptional regulator n=3 Tax=Bacteria RepID... 223 7e-57 UniRef50_C1IBM1 Phosphosugar-binding transcriptional regulator n... 223 7e-57 UniRef50_C6J2D0 Transcription regulator n=1 Tax=Paenibacillus sp... 223 7e-57 UniRef50_Q2SNY6 Transcriptional regulator n=1 Tax=Hahella chejue... 222 1e-56 UniRef50_D1AK74 Transcriptional regulator, RpiR family n=1 Tax=S... 221 1e-56 UniRef50_C2HLD1 Transcriptional regulator n=3 Tax=Lactobacillus ... 221 2e-56 UniRef50_Q03HR4 Transcriptional regulator, RpiR family n=2 Tax=P... 221 3e-56 UniRef50_C8SX74 Transcriptional regulator, RpiR family n=1 Tax=M... 220 3e-56 UniRef50_B7UNF1 Predicted transcriptional regulator, RpiR family... 220 3e-56 UniRef50_UPI0001BCD92E RpiR family transcriptional regulator n=1... 220 3e-56 UniRef50_A6T0F7 Transcriptional regulator, RpiR family n=2 Tax=O... 220 4e-56 UniRef50_Q1J2N3 Transcriptional regulator, RpiR family n=2 Tax=D... 220 5e-56 UniRef50_D0I0X8 Sialic acid utilization regulator RpiR family n=... 220 6e-56 UniRef50_C0C5Q9 Putative uncharacterized protein n=1 Tax=Clostri... 220 7e-56 UniRef50_P46117 Uncharacterized HTH-type transcriptional regulat... 220 7e-56 UniRef50_UPI000197BCAC RpiR family transcriptional regulator n=1... 219 7e-56 UniRef50_UPI0001BC57B3 oxygen-independent coproporphyrinogen III... 219 1e-55 UniRef50_D1PSB4 Transcriptional regulator n=3 Tax=Clostridiales ... 219 1e-55 UniRef50_A9MLD6 Putative uncharacterized protein n=1 Tax=Salmone... 218 1e-55 UniRef50_A0Z4E2 Transcriptional regulator n=3 Tax=Bacteria RepID... 218 2e-55 UniRef50_Q15N75 Transcriptional regulator, RpiR family n=1 Tax=P... 218 2e-55 UniRef50_B7CB00 Putative uncharacterized protein n=1 Tax=Eubacte... 217 3e-55 UniRef50_C8JWL0 Phosphosugar-binding transcriptional regulator n... 217 3e-55 UniRef50_A1BB20 Transcriptional regulator, RpiR family n=1 Tax=P... 216 5e-55 UniRef50_D2ELR8 Transcription regulator n=1 Tax=Pediococcus acid... 216 5e-55 UniRef50_C7HWK5 RpiR family phosphosugar-binding transcriptional... 216 8e-55 UniRef50_Q03CT7 Transcriptional regulator n=7 Tax=Lactobacillus ... 216 9e-55 UniRef50_D2BPE4 Transcriptional regulator, RpiR family n=1 Tax=L... 216 9e-55 UniRef50_Q1WQV4 Transcriptional regulator, RpiR family n=4 Tax=L... 215 1e-54 UniRef50_Q02YU6 Transcriptional regulator n=4 Tax=Lactobacillale... 215 1e-54 UniRef50_D1AYR1 Transcriptional regulator, RpiR family n=2 Tax=F... 215 1e-54 UniRef50_D0XGH5 Putative uncharacterized protein n=1 Tax=Vibrio ... 215 1e-54 UniRef50_B7C842 Putative uncharacterized protein n=1 Tax=Eubacte... 215 2e-54 UniRef50_C6VMT8 Transcription regulator n=3 Tax=Lactobacillus pl... 215 2e-54 UniRef50_C2L0R5 Possible transcriptional regulator RpiR n=1 Tax=... 214 2e-54 UniRef50_B9NXN7 Bifunctional protein glk n=2 Tax=Rhodobacteracea... 214 3e-54 UniRef50_Q5WK55 RpiR family transcriptional regulator n=1 Tax=Ba... 214 3e-54 UniRef50_A6LRG7 Transcriptional regulator, RpiR family n=2 Tax=F... 214 3e-54 UniRef50_A8UCF8 Phosphosugar-binding transcriptional regulator, ... 213 4e-54 UniRef50_A6D304 DNA-binding transcriptional repressor RpiR n=1 T... 213 5e-54 UniRef50_C2KD15 RpiR family transcriptional regulator n=3 Tax=La... 213 5e-54 UniRef50_B9Y4T6 Putative uncharacterized protein n=2 Tax=Holdema... 213 8e-54 UniRef50_A6UGP6 Transcriptional regulator, RpiR family n=1 Tax=S... 212 9e-54 UniRef50_C3RM35 Transcriptional regulator n=2 Tax=Bacteria RepID... 212 1e-53 UniRef50_C8P0W4 RpiR family phosphosugar-binding transcriptional... 212 1e-53 UniRef50_C3RI81 Sugar isomerase n=1 Tax=Mollicutes bacterium D7 ... 212 1e-53 UniRef50_B7X566 Transcriptional regulator, RpiR family n=1 Tax=C... 211 2e-53 UniRef50_C0D858 Putative uncharacterized protein n=1 Tax=Clostri... 211 2e-53 UniRef50_A8RCR9 Putative uncharacterized protein n=1 Tax=Eubacte... 211 3e-53 UniRef50_C7T7Y4 Transcriptional regulator n=8 Tax=Lactobacillus ... 211 3e-53 UniRef50_C2C459 RpiR family transcriptional regulator n=1 Tax=Li... 211 3e-53 UniRef50_C2LK66 Phosphosugar-binding transcriptional regulator n... 210 5e-53 UniRef50_Q03HW7 Transcriptional regulator n=13 Tax=Lactobacillal... 210 5e-53 UniRef50_B9YAK0 Putative uncharacterized protein n=1 Tax=Holdema... 210 6e-53 UniRef50_Q03FC5 Transcriptional regulator n=1 Tax=Pediococcus pe... 209 8e-53 UniRef50_A9BEU1 Transcriptional regulator, RpiR family n=1 Tax=P... 209 1e-52 UniRef50_A9WVK2 Transcriptional regulator, RpiR family n=2 Tax=M... 209 1e-52 UniRef50_C7TGD6 Transcriptional regulator, RpiR family n=3 Tax=L... 208 1e-52 UniRef50_Q71VW8 Phosphosugar-binding transcriptional regulator, ... 208 1e-52 UniRef50_C2KAY2 Transcriptional regulator n=6 Tax=Lactobacillus ... 208 1e-52 UniRef50_Q4L9T6 Similar to transcriptional regulator n=2 Tax=Sta... 208 2e-52 UniRef50_UPI00019054B9 hypothetical protein RetlB5_21050 n=1 Tax... 207 3e-52 UniRef50_C7XVK6 6-phospho 3-hexuloisomerase n=1 Tax=Lactobacillu... 207 3e-52 UniRef50_C8QBF9 Transcriptional regulator, RpiR family n=1 Tax=P... 207 4e-52 UniRef50_Q0BBX6 Transcriptional regulator, RpiR family n=65 Tax=... 206 5e-52 UniRef50_Q71W74 Phosphosugar-binding transcriptional regulator, ... 206 7e-52 UniRef50_C0XD02 RpiR family transcriptional regulator n=1 Tax=La... 206 7e-52 UniRef50_C0C1I3 Putative uncharacterized protein n=1 Tax=Clostri... 205 1e-51 UniRef50_UPI00016A71F3 transcriptional regulator, RpiR family pr... 205 1e-51 UniRef50_B9E8A7 Putative uncharacterized protein n=1 Tax=Macroco... 205 1e-51 UniRef50_C9A459 Phosphosugar isomerase transcriptional regulator... 205 1e-51 UniRef50_C4FU45 Putative uncharacterized protein n=1 Tax=Catonel... 205 2e-51 UniRef50_A4E6N7 Putative uncharacterized protein n=1 Tax=Collins... 205 2e-51 UniRef50_B9DVM9 RpiR family regulatory protein n=2 Tax=Streptoco... 205 2e-51 UniRef50_A0ZNS9 Putative uncharacterized protein n=3 Tax=Photoba... 204 3e-51 UniRef50_B7RLA4 Transcriptional regulator, RpiR family n=1 Tax=R... 204 3e-51 UniRef50_C3RHU3 Transcriptional regulator n=2 Tax=Bacteria RepID... 204 3e-51 UniRef50_C3RR03 Sugar isomerase n=2 Tax=Bacteria RepID=C3RR03_9MOLU 204 4e-51 UniRef50_Q1J381 Transcriptional regulator, RpiR family n=1 Tax=D... 204 4e-51 UniRef50_D1TJG3 Putative transcriptional regulator, RpiR family ... 203 4e-51 UniRef50_Q38V38 Putative transcriptional regulator with a sugari... 203 5e-51 Sequences not found previously or not previously below threshold: >UniRef50_A9MIE1 HTH-type transcriptional regulator murR n=48 Tax=Enterobacteriaceae RepID=MURR_SALAR Length = 287 Score = 313 bits (802), Expect = 6e-84, Method: Composition-based stats. Identities = 230/284 (80%), Positives = 256/284 (90%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 MLYL K+ NA EFTENEQKIA FL A+V EL++VSSR MAKQL ISQSSIVKFAQKLGA Sbjct: 1 MLYLAKMRNAEGEFTENEQKIATFLLAHVGELKTVSSRNMAKQLEISQSSIVKFAQKLGA 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GFTELRMALI E+S SREK A+HLHSSITS+DSLE++ARKLNREK +ALE+T L+ Sbjct: 61 NGFTELRMALIEEHSVSREKKRDKAVHLHSSITSEDSLEMMARKLNREKIVALEETYNLM 120 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 DY RL+++I +ISKAP IQITG+GGSALVGRDLSFKLMKIG+RVACE DTHVQAT++QAL Sbjct: 121 DYERLEQVINLISKAPLIQITGVGGSALVGRDLSFKLMKIGFRVACEVDTHVQATIAQAL 180 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 ++GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSL DSPLRRLA +TLDTVSGETEW Sbjct: 181 RQGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLADSPLRRLADYTLDTVSGETEW 240 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 RSSSMSTRTAQNSVTDLLFVG+VQLNDVESL+MI+RSSEL L Sbjct: 241 RSSSMSTRTAQNSVTDLLFVGMVQLNDVESLRMIERSSELITLL 284 >UniRef50_D2AGN5 Transcriptional regulator, RpiR family n=1 Tax=Shigella flexneri 2002017 RepID=D2AGN5_SHIF2 Length = 333 Score = 310 bits (794), Expect = 4e-83, Method: Composition-based stats. Identities = 256/266 (96%), Positives = 258/266 (96%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 MLYLTKI NA SEFT NEQKIADFL+A VSEL+SVSSRQMAKQLGISQSSIVKFAQKLGA Sbjct: 68 MLYLTKIRNAESEFTGNEQKIADFLRARVSELKSVSSRQMAKQLGISQSSIVKFAQKLGA 127 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCAL Sbjct: 128 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALF 187 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL Sbjct: 188 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 247 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSL DSPLRRLAHFTLDTVSGETEW Sbjct: 248 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLADSPLRRLAHFTLDTVSGETEW 307 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLN 266 RSSSMSTRTAQNSVTDLLFVGLVQ Sbjct: 308 RSSSMSTRTAQNSVTDLLFVGLVQHQ 333 >UniRef50_C7MQM6 Transcriptional regulator, RpiR family n=5 Tax=Actinomycetales RepID=C7MQM6_SACVD Length = 333 Score = 296 bits (759), Expect = 5e-79, Method: Composition-based stats. Identities = 86/279 (30%), Positives = 152/279 (54%), Gaps = 3/279 (1%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L +I + EQ++A + + S + S ++A S++++ +F + +G G+ Sbjct: 40 LVRIRSLLPGLARAEQRVAKVVLEDPSSVARRSITEVAMAAKTSETTVTRFCKAIGVGGY 99 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 +LR+AL + + + K++ L IT+DD L + K++ A+E+T LD A Sbjct: 100 PQLRIALAADTARTEAKSS---RDLGGDITADDDLASVVSKVSFADARAVEETAEQLDIA 156 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L ++ E++++A + + G+G SA V DL KL +IG +DTH+ T + L +G Sbjct: 157 ELTRVTELLAEATRVDVYGVGASAFVAADLQQKLHRIGRVSFAWSDTHIMLTSAAVLSEG 216 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 DV +AIS+SG+ + V A++ GAT +AIT+ SP+ +A L T + ET +RS Sbjct: 217 DVAVAISHSGATTDTVEALRVAKEHGATTVAITNFPRSPIASVADHVLTTAARETTFRSG 276 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 + ++R AQ +V D LF+G+ Q ES+ ++ + E Sbjct: 277 ATASRIAQLTVIDCLFIGVAQRRMDESMAALEATREAVN 315 >UniRef50_Q8R7I8 Transcriptional regulator n=3 Tax=Firmicutes RepID=Q8R7I8_THETN Length = 285 Score = 291 bits (745), Expect = 2e-77, Method: Composition-based stats. Identities = 81/280 (28%), Positives = 151/280 (53%), Gaps = 7/280 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + KI + + T E+K+AD++ N + +S ++A++ G +++IV+F +++G Sbjct: 8 NVILKIQSIYNSLTNAEKKVADYVLENAESVIYLSITELAEKCGTGETTIVRFCRRIGLS 67 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF E ++ L E + +H +I+ +D L+V+ +K+ E LA+ T LL Sbjct: 68 GFQEFKLNLAKEIA-------EPETSIHENISFNDPLDVLVQKITTENTLAISNTVKLLS 120 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + L+K ++ I A IQ G+G S D +K M++G V D H+QA + +L Sbjct: 121 MSELEKAVDAIINARKIQFYGVGASGYTALDAKYKFMRLGLNVDANLDAHIQAISAVSLT 180 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV + IS+SGS K+ V A++ GA VIAIT+ SP+ +A L T + ET R Sbjct: 181 DKDVAVGISFSGSTKDTVETCRLAKEAGARVIAITNYARSPITSVADIVLLTSAKETPLR 240 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 S +++++ AQ + D+L+ + ++++ + ++++ Sbjct: 241 SGALTSKIAQLHILDILYTAVAVKLKDKAVQELNKTAKAV 280 >UniRef50_A4F6M8 RpiR-family transcriptional regulator n=7 Tax=Actinomycetales RepID=A4F6M8_SACEN Length = 308 Score = 290 bits (743), Expect = 3e-77, Method: Composition-based stats. Identities = 83/278 (29%), Positives = 152/278 (54%), Gaps = 4/278 (1%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L +I + EQ++A+ + A+ + + S ++A+ G S++++ +F + +G G+ Sbjct: 16 LIRIRSLLPGLARAEQRVANIVLADPASVARRSITEVAEAAGTSETTVTRFCKAIGVGGY 75 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 +LR+AL + + +T++ L S I +D + I K++ A+E+T LD Sbjct: 76 PDLRIALAADTA----RTSSRDRDLGSDIGPEDDVRKIIEKVSYADAKAVEETADQLDAE 131 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L+ +++ +++A I + G+G SA V DL KL +IG +DTH T + L++G Sbjct: 132 TLRSLVDAVARARRIDVYGVGASAFVALDLQQKLHRIGLTCFAWSDTHNALTSAAVLREG 191 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 DV I IS++G+ E V + A K+GAT A+T+ SP+ +A L T ET +RS Sbjct: 192 DVAIGISHTGATTETVEALQEAGKRGATTAALTNFARSPITEVADHVLTTAVRETTYRSG 251 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 +M++R Q +V D LF+G+ Q + ++ ++ + E Sbjct: 252 AMASRIGQLTVIDCLFIGVAQRHLDQTKAALEATYEAV 289 >UniRef50_C6WFA6 Transcriptional regulator, RpiR family n=2 Tax=Actinomycetales RepID=C6WFA6_ACTMD Length = 304 Score = 290 bits (743), Expect = 4e-77, Method: Composition-based stats. Identities = 82/278 (29%), Positives = 143/278 (51%), Gaps = 3/278 (1%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L KI + EQ++A + N + + S ++A+ G S++++ +F + +G G+ Sbjct: 11 LVKIRSLLPGLARAEQRVAKVVLDNPATVAHRSITEVAESAGTSETTVTRFCKAIGVGGY 70 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 ELR+AL + + + T L I D L + K+ A+E+T L+ Sbjct: 71 PELRIALAADTART---AARTDRDLGGDIGPGDDLRQVVGKVAFADARAVEETAEQLNVD 127 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 LQ +++ +++A + + G G SA V DL KL +IG DTH+ T + L Sbjct: 128 TLQAVVDAVARAGRVDVYGFGASAFVAFDLQQKLHRIGRTCFAWNDTHIALTSAAVLTGA 187 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 DV + IS++GS E V AR++GAT +A+T+ SP+ +A L T + ET +RS Sbjct: 188 DVAVGISHTGSTTETVEALRVARERGATTVALTNFPRSPISEVADHVLTTAARETTFRSG 247 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 +M++R AQ +V D LF+G+ Q + + ++ + + Sbjct: 248 AMASRIAQLTVVDCLFIGVAQHHVESATSALEATYDAV 285 >UniRef50_UPI0001788119 transcriptional regulator, RpiR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788119 Length = 278 Score = 286 bits (733), Expect = 5e-76, Method: Composition-based stats. Identities = 74/281 (26%), Positives = 138/281 (49%), Gaps = 7/281 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L ++ +E+K+A F+ +E+ +S +A + G SQ++IV+ + +G +G+ Sbjct: 5 LVRLREVYDSLNPSERKVAAFILQEPAEMIQMSVADLAVRSGSSQAAIVRLCKTMGFKGY 64 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 +L++ + G+ + I +DS+ I + ++ ++ T +++ Sbjct: 65 QDLKLKVAGDLQ-------EPLATGYQDIRPNDSISAIIQNVSNNNIQSIRDTMKIMEEG 117 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 +++ + + ++ I + G+G S L+G D K ++I D HVQ T + L Sbjct: 118 MVEEAVLALDQSKRIFMFGVGASNLIGMDAQQKFLRINKVCISFPDPHVQLTSAVLLTPD 177 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 D + ISYSG E++ A A+++G I IT DS L R L T S E E RS Sbjct: 178 DAAVCISYSGETDEVIRAAAIAKEKGCKTIGITKYGDSTLSRSVDIPLYTSSTENEIRSG 237 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 +MS+R Q ++ D+L++G+ N S+K + S +RL Sbjct: 238 AMSSRITQLNLIDILYLGVASRNYENSVKYLDESRRAIKRL 278 >UniRef50_A0KFB6 Transcriptional regulator, RpiR family n=3 Tax=Gammaproteobacteria RepID=A0KFB6_AERHH Length = 286 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 122/284 (42%), Positives = 190/284 (66%), Gaps = 1/284 (0%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 ML L+KISN S+ + +E KIAD++ A ++ SS+++A+Q +SQSSIVKF QK+G Sbjct: 1 MLTLSKISNIRSQLSPSELKIADYILACPEQVTHFSSQELAQQADVSQSSIVKFTQKIGF 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GFT ++A+ + L++ I DD LE +A+KL +EK ++ +T L Sbjct: 61 KGFTAFKLAVSEDLGRKHAIKTDNVGDLYNGIGRDDDLETMAKKLAQEKINSIVETTQAL 120 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D A L ++++VI++A +Q+ G+GGSAL +DL +KL+KIG D+HVQ +++Q L Sbjct: 121 DNATLARVLDVINQAGRVQLVGIGGSALTAKDLWYKLLKIGVTTLFAQDSHVQISIAQTL 180 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 GDVQ+ +SYSG+ ++++ AE A++ GAT+IA+TS ++PLR++A LDTV+ E E Sbjct: 181 GPGDVQLVVSYSGASRDVLAAAELAKRNGATLIAVTSFRNTPLRQMADMVLDTVADENEL 240 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 R SS+S+RTAQN++TD+LF+GLVQ D E+ +I + RL Sbjct: 241 RISSISSRTAQNTITDILFLGLVQRRD-EAWALIDGTRGAIDRL 283 >UniRef50_A1HSQ6 Transcriptional regulator, RpiR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSQ6_9FIRM Length = 287 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 84/278 (30%), Positives = 157/278 (56%), Gaps = 7/278 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L +I + T+ EQK+AD++ N +++ +S ++A+ G ++++I + QK+G +G+ Sbjct: 12 LPRIRSIYKALTKAEQKVADYILENAAKVVHLSITELAEVSGSAEATIFRLCQKVGYRGY 71 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 ++AL G+ E ++ + + DS+ VIARK+ + L+ T ++D A Sbjct: 72 QHFKIALAGDLYTPAEL-------VYKDVNAGDSMGVIARKVFHDINEGLQDTLKIIDEA 124 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L K + I+KA I G GSA++ D+ ++ M+ G V AD H+Q + ++ G Sbjct: 125 ALDKAVAAITKARRIDAYGSAGSAVIAADIEYRFMRFGIPVRAYADPHMQIISAALMQPG 184 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 D+ IA+S++G+ ++++ A++ GATVIAITS SPL +LA TL + ETE+RS Sbjct: 185 DLAIAVSHTGANRDLLDSVAMAKQNGATVIAITSYMKSPLSKLADITLCGSAKETEYRSE 244 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 +M+ R ++ D L+VG++ ++ +++ + Sbjct: 245 AMAARLVHLAIVDALYVGVMLDRQDCIVENMEKIRKAI 282 >UniRef50_C0ZD50 Transcriptional regulator n=32 Tax=Bacillales RepID=C0ZD50_BREBN Length = 288 Score = 281 bits (719), Expect = 2e-74, Method: Composition-based stats. Identities = 85/281 (30%), Positives = 145/281 (51%), Gaps = 8/281 (2%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 LT++ ++ + EQ+IAD++ + SE+ S ++A Q + +++ + ++LG +G Sbjct: 11 VLTQLRAIYTQLSGKEQQIADYILEHASEIIHFSITELADQCQCADATVFRLCRRLGFRG 70 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSIT-SDDSLEVIARKLNREKELALEQTCALLD 121 + ++AL E + ++ +H I DD + IA K+ + T +++ Sbjct: 71 YQAFKIALASEVTNPKQT-------IHQEINLDDDDVSAIAEKIFTANIETIRDTQQIIN 123 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L KI+ + A I+ G GGSA++ +D K M+ G +D H Q + L Sbjct: 124 KDELMKIVSCLENASRIEFYGSGGSAVIAQDAYHKFMRTGIPCLYHSDAHYQVMSASLLT 183 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 KG V + IS+SGS K+I+ + A++ GA I ITS SPL RLA L T S ET +R Sbjct: 184 KGAVVVGISHSGSNKDILAALQVAKEAGAKTIGITSYGKSPLVRLADMCLYTTSRETVFR 243 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 + ++S+R AQ S+ DLL+V + +++ IQ E Sbjct: 244 TEALSSRLAQLSLIDLLYVAVSLRRQEDTIANIQHIREAIS 284 >UniRef50_Q8RD36 Uncharacterized HTH-type transcriptional regulator TTE0211 n=3 Tax=Clostridia RepID=Y211_THETN Length = 282 Score = 280 bits (718), Expect = 3e-74, Method: Composition-based stats. Identities = 89/283 (31%), Positives = 148/283 (52%), Gaps = 7/283 (2%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 L I S FT +E KIA ++ N + + +S ++A S++SI++F + +G +G Sbjct: 4 VLAVIREMSSSFTPSEAKIAKYILENPTVVTELSVNELANACDTSEASIIRFCRTIGLKG 63 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 F EL++ + + K L ITS+D + + +K+ + A++ T A+L+ Sbjct: 64 FQELKIKIAVSLAKQTRK-------LDGGITSEDDVMAVIQKIANFNKQAIDSTIAVLNA 116 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 L K E ++ A I G+ S +V D K +I DTH+Q T + LKK Sbjct: 117 EELTKAAEALANANKIDFYGVAASGVVAYDAMLKFSRINIPCTAYQDTHLQLTSAVNLKK 176 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 GDV ISYSG+ KEIV + A++ GAT I++T SPL + A L S E +R+ Sbjct: 177 GDVAFGISYSGATKEIVEAIQTAKEAGATTISLTKYGQSPLAKAADINLFVSSEEAMFRA 236 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +M++R AQ +V D+LF+ + Q + ++ ++ +SE+ K Sbjct: 237 GAMASRIAQLTVIDILFILVAQKKYNDVVRYLENTSEVLSMRK 279 >UniRef50_C6J1X3 RpiR family transcriptional regulator n=2 Tax=Bacillales RepID=C6J1X3_9BACL Length = 289 Score = 275 bits (705), Expect = 8e-73, Method: Composition-based stats. Identities = 76/283 (26%), Positives = 141/283 (49%), Gaps = 6/283 (2%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 L +S+ + E+K+ +++ + + + ++A GIS S++ +F + +G Sbjct: 4 ILHAVSSHLETLSPQERKLGEYILESPATVIHQGITELANACGISPSTVTRFCKTFHFKG 63 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 F + +M L E + A + + I + + L+ I + ++ T LLD Sbjct: 64 FPDFKMKLASELAHK------PAENHYQDIIAGNDLQKIVEAMEANHLASITDTTRLLDM 117 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 +L + +E + +A I + G+ S++V +D KL++IG AD+H+Q T + +L + Sbjct: 118 NQLSRAVEALCRAKRIDLYGVATSSIVAQDFYQKLVRIGKNCTAFADSHMQITSASSLGE 177 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 GDV +AISYSG E + A+ GAT +++T + + L LA L + S E R Sbjct: 178 GDVALAISYSGETPETIDALRCAKDSGATTLSLTQYSSNSLASLADIALFSSSLEEGMRR 237 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 M++R AQ V D+LF G+V L + + ++ S + Q + Sbjct: 238 GDMASRIAQLHVIDILFTGMVSLEFQDFIPKLESSYQNVQIYR 280 >UniRef50_C6Q8T9 Transcriptional regulator, RpiR family n=1 Tax=Thermoanaerobacter mathranii subsp. mathranii str. A3 RepID=C6Q8T9_9THEO Length = 282 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 87/278 (31%), Positives = 144/278 (51%), Gaps = 7/278 (2%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 LT I + F +E KIA ++ N + +S ++A+ S++SIV+F + +G +G Sbjct: 4 ILTVIKELEATFKPSEAKIAKYILDNADVVTELSINELARACDTSEASIVRFCRTIGLKG 63 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 F EL++ + S +K L IT DD + + +K+ + A++ T +LLD Sbjct: 64 FQELKIKIAVSLSKQTKK-------LDGGITDDDDVSDVIQKIANFNKQAIDNTISLLDV 116 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 + K ++ +S A I G+ S V D K +I DTH+Q T + LKK Sbjct: 117 KSIIKAVDALSNANKIDFYGVAASGTVAYDAMLKFARINIPCTAYQDTHLQLTSAANLKK 176 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 GDV ISYSG +EIV E A++ GAT I++T PL ++A L S E +RS Sbjct: 177 GDVAFGISYSGCTREIVEALEVAKEAGATTISLTKFGQFPLVKVADINLFVSSEEPLFRS 236 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSEL 280 + ++R AQ +V D+LF+ + + + +K ++ ++E Sbjct: 237 GATASRIAQLTVIDILFILVAKRKYNDVVKFLENTTEA 274 >UniRef50_C0CSK7 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CSK7_9FIRM Length = 282 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 85/279 (30%), Positives = 147/279 (52%), Gaps = 7/279 (2%) Query: 7 ISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTEL 66 I + T E+KIA+++ N ++ + + ++A+ +S +S+V+F + LG +G+ + Sbjct: 10 IRGRMNYLTNTERKIANYVLENYDQVLNSNITELAENAKVSDASVVRFCRSLGYKGYQDF 69 Query: 67 RMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQ 126 ++ + + HL+ + DS ++I K+ + LE+T A L+ ++ Sbjct: 70 KINAAKDVLPREK-------HLNPILEESDSPDMICHKIFNLEISVLERTLASLNMREVE 122 Query: 127 KIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQ 186 K + I + G GGS LVG+D K MKIG +V D +Q S +GDV Sbjct: 123 KAAQFIFHGKRVLFFGSGGSLLVGQDALHKFMKIGVQVYVHEDRDLQLMASSLAGEGDVV 182 Query: 187 IAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMS 246 I IS+SGS ++ C + A++ GA IA+ S +PL ++A +DT S ET ++S S+S Sbjct: 183 IGISHSGSNYSVLRCLKNAKENGAQTIALVSRGKTPLSKIADVVIDTASEETIFQSESVS 242 Query: 247 TRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 TR AQ ++ D L + +N ES + IQ++ + T K Sbjct: 243 TRIAQLAIIDSLVSIVAFMNYDESYRAIQKTRKATSENK 281 >UniRef50_B8E0M8 Transcriptional regulator, RpiR family n=2 Tax=Dictyoglomus RepID=B8E0M8_DICTD Length = 281 Score = 273 bits (699), Expect = 4e-72, Method: Composition-based stats. Identities = 88/280 (31%), Positives = 146/280 (52%), Gaps = 7/280 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L KI F ++E+K+A+++ A E+ + ++A+++G+S+++IV+ +KLG + Sbjct: 4 SILEKIKEQKESFRDSEEKVANYILARWQEVLHLPITELAERIGVSEATIVRMCKKLGLR 63 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF EL++AL E +H ++ D LE I +K+ A+E T ++ Sbjct: 64 GFQELKIALATEKIQ-------PIKTVHQAVQEGDDLETILKKVFSANIRAMESTLNVIS 116 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 +++ I+ I A +QI G+GGS V D K MK G D+H+ A + L+ Sbjct: 117 VKEIERAIDAILNARQLQIYGVGGSGPVALDAQHKFMKTGIPTVAYIDSHMMAMSASILE 176 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV I IS SGS K+I E A+ +GAT I IT +PL R+ L S ET +R Sbjct: 177 PQDVVIGISASGSSKDIFEALELAKNRGATTIGITHYAKTPLDRVLDIKLSVSSEETFYR 236 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 + S S R AQ S+ D L++G+ + ++ ++ + E Sbjct: 237 TESTSARIAQLSIIDTLYIGVALKRLDKMIENLKLTREAI 276 >UniRef50_UPI000196C77F hypothetical protein CATMIT_02718 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C77F Length = 277 Score = 273 bits (699), Expect = 4e-72, Method: Composition-based stats. Identities = 78/284 (27%), Positives = 147/284 (51%), Gaps = 9/284 (3%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M +T+I A TE E++IA ++ + ++ S+ ++ ++ S +++V+FA+KLG Sbjct: 1 MSCITRIKEA--SLTETEKEIAQYIIEHPEQVLDDSAMKLGEKTHSSSAAVVRFAKKLGY 58 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF +L++ L + S + + + D+ + + K++ + + +++T LL Sbjct: 59 SGFPQLKIELAKDLVGSIPEVDNL-------LHPDEDMATLMNKVHHSQIVTIDKTYHLL 111 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + L+ +++ + +A + + G+GGSA+V D KLM+IG D H+Q T + Sbjct: 112 SASTLEDVVKALEQAKHVYLFGVGGSAIVCDDFIHKLMRIGKYACFYPDVHLQMTSVPNM 171 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + D+ I +SYSG K IV A+ A++ +AIT + L +L L S E Sbjct: 172 TEEDLAIFVSYSGETKGIVTAAKWAKEMNIPSVAITQSAYNKLGKLVDHVLTIPSQEQSL 231 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 R +MS+R + V DLL+ GLV+ N + + I + + Q + Sbjct: 232 RIGAMSSRYSSLIVVDLLYYGLVKRNKEKYAQKIINTRRIIQEM 275 >UniRef50_Q97MK5 Uncharacterized HTH-type transcriptional regulator CA_C0191 n=5 Tax=Clostridia RepID=Y191_CLOAB Length = 283 Score = 272 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 80/279 (28%), Positives = 147/279 (52%), Gaps = 5/279 (1%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L +I ++ +E+KIA+++ N + +S +++A + G S+S++V+ + L +G+ Sbjct: 5 LIRIKEIINDLNPSERKIAEYILNNSKAISDLSIKELAGKSGSSKSAVVRLCKILNYKGY 64 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 E R+A+ + ++ N ++ I D L I + ++ + +++ T +L Sbjct: 65 KEFRIAIAKDTVNVDKEENR-----YTDINPKDDLHTIIKNISYNNKKSIDNTMEVLSEE 119 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 ++K E ISKA + G+G S +V D K M+I V DTH+Q + LKKG Sbjct: 120 LVEKASEAISKAYRVDFYGIGASYIVAMDAFQKFMRINKNVRATPDTHLQVEFASNLKKG 179 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 DV +AISY+G K+ +AA++ GAT I++T + + L L +S E +RS Sbjct: 180 DVAVAISYTGETKDTFESIKAAKEAGATTISVTKFGSNSISDLCDINLFVLSPEITFRSG 239 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 +MS+R AQ +V D+LF + E + ++ + + T+ Sbjct: 240 AMSSRIAQLNVIDILFTSVAGRMFEEVKEFLENTRKSTR 278 >UniRef50_A7GD47 Transcriptional regulator, RpiR family n=10 Tax=Clostridium RepID=A7GD47_CLOBL Length = 281 Score = 272 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 91/285 (31%), Positives = 156/285 (54%), Gaps = 6/285 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L +I T++E+KIA+++ + ++ S S++++A + S +SI++F +K+G Sbjct: 1 MGVLLRIRENFDSMTKSEKKIAEYIFKSPKDIISDSAQEIAIKTSTSPASIIRFTKKVGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 E + AL+ E + + I +DS++ I KL + + T L+ Sbjct: 61 NSLNEFKFALVAE------EYTKESTEFDYIINYNDSIDSIINKLGNKVIDTINDTKELV 114 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D +L + ++ I A I + G+G SA+V D +KL++I +V + D+H+Q VS + Sbjct: 115 DDEKLLEAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMFQQDSHLQLAVSVHI 174 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 DV +AISYSG+ +E+ L E A+K GAT IAIT S L +A L+ S E + Sbjct: 175 TNRDVAVAISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDL 234 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 R ++S+RT+Q VTD LF+G+ + N ++ K + + L + LK Sbjct: 235 RIGAISSRTSQLFVTDSLFLGIAKENLDKTEKNLINTRNLVEVLK 279 >UniRef50_C0ZJF9 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZJF9_BREBN Length = 297 Score = 272 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 78/282 (27%), Positives = 146/282 (51%), Gaps = 7/282 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L I + FT++EQK+A + + S +A++ G+ ++++++F +K+G G+ Sbjct: 22 LLHIQSLLPSFTKSEQKVAHIVLQQTDSVIYSSVIDLAEKAGVGETTVLRFCRKIGFHGY 81 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 E ++AL E +LH + DDSL++I K+ + A+ T AL Sbjct: 82 QEFKLALAQELVN-------PVKNLHGEVGEDDSLDIITHKVTATNQQAIGDTSALFQLE 134 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 +L++ ++++ KA I G+G SA+ +D + ++IG RV ++H+QA + L G Sbjct: 135 QLERCVDLLQKANTIHFYGVGTSAVTAQDAKYTFLRIGLRVDAFNESHLQAMAAATLGPG 194 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 DV I +S SGS K+ + + A++ GA I +T SP+ +A TL T + E + Sbjct: 195 DVAIGLSVSGSTKDTIDSLKVAKQAGAACICLTHYRRSPITNVADITLLTAAQEGPLQGG 254 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S++ + AQ V D++ + N ++L +R+++ K Sbjct: 255 SLAAKIAQLHVLDVISTTITMRNKEKALLYKERTAKAVLERK 296 >UniRef50_A8LV24 Transcriptional regulator, RpiR family n=7 Tax=Actinomycetales RepID=A8LV24_SALAI Length = 320 Score = 270 bits (691), Expect = 4e-71, Method: Composition-based stats. Identities = 74/283 (26%), Positives = 137/283 (48%), Gaps = 2/283 (0%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 L ++ + T +++A+ + ++ + ++A++ G S ++I +F + +G +G Sbjct: 33 VLARVRAGADDLTGALRRVAEHVLSDPEAAARATIVELAERSGTSPATITRFCRAMGFEG 92 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 + +LR+ + E R + + + I D L + ++ A+ T ALLD Sbjct: 93 YADLRLGIAAE--TGRARLAGWTVDIGREIQPGDPLRRVLDQIIAADTRAMHDTAALLDL 150 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 A +++ I+ A + I G GSALVG ++ F L +IG +D H + L+ Sbjct: 151 AEVERAAVAIAGASRVNIFGASGSALVGEEMQFMLHRIGVAAWAWSDVHEGLASAALLRV 210 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 GDV + +S+SG +E + A +GAT +A+T SPL LA L T S T +R Sbjct: 211 GDVALGVSHSGQTRETIEMLAEAGSRGATTVAVTGFPRSPLAELADIALLTASRATTFRP 270 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 ++S R Q V DLL++ + Q + ++R+++ K Sbjct: 271 DALSARHPQLVVLDLLYIAVAQRTHDRAHAALRRTAQAVDGHK 313 >UniRef50_A8S9N1 Putative uncharacterized protein n=3 Tax=Bacteria RepID=A8S9N1_9FIRM Length = 321 Score = 270 bits (690), Expect = 5e-71, Method: Composition-based stats. Identities = 77/277 (27%), Positives = 139/277 (50%), Gaps = 4/277 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L ++ + E++IA F+ N E +++ R +A++ S SS+V+ + +G Q Sbjct: 36 NVLLRLREVQPSLSSTERQIAQFILENPDETTTLTIRDLARRSFSSPSSVVRICRVIGFQ 95 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ ELR AL E + E + H IT DSL+ I K+ + +L T LL Sbjct: 96 GYKELRHALTLELATLGENGS----HREKDITPQDSLQEIVDKVTHKNIQSLLDTQRLLL 151 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L++ +E+I+ A + + G+G S V +D K +++ D+H Q ++ Sbjct: 152 LDELEQCVELIANARTVLLFGIGSSLCVAKDTYLKFLRLDKPCVVNEDSHSQLLQARNAT 211 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV I SYSG E++ C + + GA VIA+T S + +LA L + E+ +R Sbjct: 212 AQDVGIVFSYSGQTMEMIQCIKEMKAGGAPVIAVTRYYPSEVAQLADHVLYVAANESLFR 271 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSS 278 + +MS+R +Q +V D+L+ N ++++ + ++ Sbjct: 272 NGAMSSRLSQLNVVDILYTAYASRNHEDTMRRLTKTH 308 >UniRef50_C4L752 Transcriptional regulator, RpiR family n=4 Tax=Bacillales RepID=C4L752_EXISA Length = 282 Score = 269 bits (688), Expect = 8e-71, Method: Composition-based stats. Identities = 83/282 (29%), Positives = 151/282 (53%), Gaps = 7/282 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M +I A S ++ EQ+IAD++ ++ + Q+A L +++S++ +F Q++G Sbjct: 4 MNGTARIRGAYSTLSKKEQRIADYILKQPEQIIHHTINQVADDLDVAESTVFRFCQRVGF 63 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +G+ L++AL + A + +H IT D+ IA K+ +E T +L Sbjct: 64 KGYQALKIALASDVVAPLQ-------DIHEDITETDTALEIAEKIFSTNGKTIESTRQIL 116 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + L+K +E+ A I+ G GGSA+V D K ++ G +V+ ++H+Q + L Sbjct: 117 EGVSLEKAVELFLGARRIEFFGSGGSAVVALDAYHKFVRSGLQVSAMLESHMQLMSASQL 176 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 DV + IS+SG+ KE + A+ +++G +IAIT+ SPL ++A +L TVS ET + Sbjct: 177 TTADVAVVISHSGASKETLDIAKLLKEKGVPMIAITNYAKSPLSKIADVSLYTVSQETAF 236 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 RS ++++R A+ S+ D LF ++ + +Q+ E Sbjct: 237 RSEALASRIAELSLIDALFTAVMMRRGEAARTSLQQMREAIS 278 >UniRef50_C4V1J5 RpiR family transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1J5_9FIRM Length = 282 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 82/283 (28%), Positives = 148/283 (52%), Gaps = 7/283 (2%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 +L I + T++E+KIA+++ + + + + ++A+++G S +SIV+F + G +G Sbjct: 6 FLQLIEDKLGTLTKSEKKIAEYILEHPNRVVDATITELAERIGTSDASIVRFCKLFGCKG 65 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 + ++ L E ++ N + D+ I +K+ + L +T +L+ Sbjct: 66 YQNFKIRLAREVVPHYKQLNVA-------LEQHDTALTICQKIFNTEIATLHETLEMLNV 118 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 LQ + + I +A +I++ G GGS++V +D+ K +K+G R D +QA + LKK Sbjct: 119 EHLQTMAQRIREADYIEVFGSGGSSVVAQDIRHKFLKVGIRCTVLLDADIQAMSASLLKK 178 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 GDV I IS++GS K + C + ARK GA VI +T+ SP+ R+A + S ET ++S Sbjct: 179 GDVAIGISHTGSTKSVFHCLKMARKNGAYVILLTTQAKSPIGRIADLVIPVGSKETLFKS 238 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S S R A+ V D + V + + I ++ + T K Sbjct: 239 ESTSARIAELVVMDAVLALAVSDDYKKYNVKITKTRDATSENK 281 >UniRef50_A8FJ30 Possible RpiR family transcriptional regulator n=51 Tax=Bacillus RepID=A8FJ30_BACP2 Length = 285 Score = 267 bits (682), Expect = 4e-70, Method: Composition-based stats. Identities = 79/280 (28%), Positives = 147/280 (52%), Gaps = 6/280 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 + KI A + IA+ + + ++ +S ++AK+ S+++I + ++LG +GF Sbjct: 9 IEKIRAASRGLPPKLKAIAEHITSEPRDIIHLSIVELAKKTASSEATIFRLCKRLGFEGF 68 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 +L++A+ E ++ ++ ++ DD + V +K+ + AL+ + LL+ Sbjct: 69 QDLKIAIAQEIDQTKPN------YVDEEMSLDDDMAVFMQKVFQTNISALKDSFQLLNPE 122 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 ++K I++I +A ++ G GGS L+ D K M+ G D+H QA + L + Sbjct: 123 DVEKAIQIIHEAKRLEFYGSGGSGLIATDAFHKFMRTGINCIVHTDSHFQAMSAGLLDQH 182 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 I IS+SG K+++ + A+ +GA I ITS SPL +LA TL T + ET +R+ Sbjct: 183 STVIGISHSGRNKDLLDAMKTAKSKGAKTIGITSYQRSPLSQLADVTLYTATQETAFRTE 242 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 +MS R AQ +V D+L+ L L E++ +++ E + Sbjct: 243 AMSARLAQLTVIDVLYFALAHLRQQETITNLKQMRETISQ 282 >UniRef50_C4G9W4 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G9W4_9FIRM Length = 280 Score = 266 bits (681), Expect = 5e-70, Method: Composition-based stats. Identities = 67/280 (23%), Positives = 138/280 (49%), Gaps = 9/280 (3%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L + + ++ T E+KIAD++Q N ++ +S ++A++ ++ +S+ +F + +GA+ Sbjct: 5 NVLLSMQLSYNQLTRTEKKIADYVQKNAQKVLFMSITELAEECHVADASVHRFCRTIGAK 64 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ E +M L + + + I +++ + A+ +T LLD Sbjct: 65 GYQEFKMWLSINMGHEKGEEESEEEDGKEP---------IFQQVLKSHLEAINETNQLLD 115 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 ++ + + ++++A I G+G S + + K + + +V C DTH+QA + + Sbjct: 116 KEKVDQAVRMLTEARQIMFFGVGDSKTAAIEANNKFLHVTPKVMCAGDTHLQAMAASMMT 175 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 + D+ +SYSGS K+ V A+ A++ GA VI+IT SPL + L S E Sbjct: 176 EEDLLFVVSYSGSTKDTVEVAQIAKEAGAKVISITRFLKSPLTEFSDCVLICGSKEGPLE 235 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 SM + +Q + D+L+ + N ++ + Q+++ Sbjct: 236 GGSMGAKLSQLHIIDILYQCYFKANGKKARENRQKTANAV 275 >UniRef50_C0Z7S3 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z7S3_BREBN Length = 288 Score = 266 bits (681), Expect = 6e-70, Method: Composition-based stats. Identities = 79/279 (28%), Positives = 154/279 (55%), Gaps = 6/279 (2%) Query: 7 ISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTEL 66 + + +E+K+AD++ A+ ++ +S +++A+ G+S+++I++ A+ L +G+ EL Sbjct: 12 LQAILDQLKPSERKVADYILAHPEDVVKLSVQKLAEYSGVSEATIIRLARSLNMKGYQEL 71 Query: 67 RMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQ 126 ++ + G+ T TA + I + S+E I + ++ +++ T ++L ++ Sbjct: 72 KLRVAGDL------TKQTARGSYQEIMMEGSVESIMQAVSWNNIQSIQDTLSVLSNEEVK 125 Query: 127 KIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQ 186 K ++V+S A I + G+G SA++ D+ K +I +D H Q T + L + DV Sbjct: 126 KAVDVLSVARKIDVYGVGASAVIADDIRQKFSRINLWCEAYSDFHAQLTSAVTLTEKDVV 185 Query: 187 IAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMS 246 I ISYSG ++I+ A++QGAT+I +T SP+ LA+ L T S E RS +M+ Sbjct: 186 IGISYSGQTEDIIQSLTEAKQQGATIITLTKFGPSPVAELANIRLFTSSVEKSIRSGAMA 245 Query: 247 TRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +R AQ +V D+LF+ ++ + ++++S R K Sbjct: 246 SRIAQLNVIDILFITMISRMQERVIPLLEKSRLAVSRTK 284 >UniRef50_C5C2G7 Transcriptional regulator, RpiR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C2G7_BEUC1 Length = 285 Score = 266 bits (680), Expect = 7e-70, Method: Composition-based stats. Identities = 79/285 (27%), Positives = 140/285 (49%), Gaps = 1/285 (0%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M + I + +F + +++A+ + + + ++A Q S+++IV+F + LG Sbjct: 1 MSIQSSIQSRLDQFAPSMRRVAEAILERPQVVLEKTISELASQCETSETTIVRFCRTLGL 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 G+ +LR+ L E + H + I ++D L +A K+ L +E+T A L Sbjct: 61 TGYVQLRLELATEIGRENAQRGELGDH-GADILAEDGLAAMAAKIAFTDTLGIEETLASL 119 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D L+++++ I A G+G S DL KL +IG D H T + Sbjct: 120 DIEHLERVVDAIDTAGRSVTYGVGSSGSSAADLQRKLFRIGRVAFTFDDPHDAVTAAALS 179 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 GDV +A S+SG+ +E + A K GA +A+T+ +S L R A L T ET++ Sbjct: 180 SPGDVAVAFSHSGATREALAFLATAGKHGARTVAVTNSAESALARAADIVLVTSVRETQF 239 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 RS +M++R AQ + D +FVG+ Q +++ ++ + Q L+ Sbjct: 240 RSGAMASRIAQLMIVDCIFVGVAQRRYDQTVDALKSTYAAAQELR 284 >UniRef50_UPI000197C448 transcriptional regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C448 Length = 286 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 117/284 (41%), Positives = 185/284 (65%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L I+ + EN++KIA F+ N + ++SS+Q+A+ L +SQS+IVKF+QK+G Sbjct: 1 MTLLDIITYSLPRLAENQRKIAQFILENPENVLNLSSQQLAEILDVSQSAIVKFSQKVGV 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +G+ L++AL + K A LH+ I DD+L V+A+KL EK ++ +T L+ Sbjct: 61 KGYPALKLALSEIIGRQQLKDGAPHSALHNRIAPDDNLMVVAQKLAMEKNHSITETTKLI 120 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D+ + ++I+E I ++ +QI G+GGS L +DLS+KL KIG E+D HVQ + L Sbjct: 121 DFKQFERIVERIDQSQRVQIVGIGGSGLTAKDLSYKLQKIGITTLVESDHHVQIAAALTL 180 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 DVQI IS++G +K+++ A ARKQGA VIAIT DSPL +LA + L++++ E EW Sbjct: 181 NTHDVQIVISFTGRRKDMLTAANIARKQGACVIAITRDCDSPLGQLADYVLESIAEEDEW 240 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 RSSS+S+RTAQN++TDL+F+ L+Q + ++ ++ + + +L Sbjct: 241 RSSSISSRTAQNTLTDLIFMALLQRREAKAKSLVMNARVVINKL 284 >UniRef50_C3WE65 Transcriptional regulator n=5 Tax=Fusobacterium RepID=C3WE65_FUSMR Length = 284 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 87/285 (30%), Positives = 163/285 (57%), Gaps = 3/285 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L KI++ + E+K+ +++ N +++ +++ ++A SQ+++V+FA++LG Sbjct: 1 MGVLIKINSMLDNISSTEKKVGEYILENPDKIKDLNTYELANITKTSQATVVRFAKRLGF 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF ++AL + + +++ +H I DDS E+I RK++ E A+ T + Sbjct: 61 KGFPAFKLALSQDLGNRKAESHVNI--MHEEIKPDDSFEIIGRKISNENITAISDTYEVT 118 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D+ L+K + ++SKA I + G+G S +V +D +KL+++G E DTH+Q + + Sbjct: 119 DFTELEKAVVMLSKARKIMLAGIGFSGIVAKDFYYKLLELGKHAMIEVDTHMQLSCLSTM 178 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + DV IS+SG E+ + A+ +G TVIA+TS+ +P++ LA L+TV + + Sbjct: 179 GEDDVLFVISHSGKTMEMYNVVKVAKSKGITVIAMTSIAPNPIKDLADIRLNTVEMNSNF 238 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 RS+++S R +Q +V D+L+V ++ N I + EL Q K Sbjct: 239 RSTALSPRISQLTVIDMLYVKMMLENK-NMQDYIFDAIELVQGFK 282 >UniRef50_UPI0001693BD8 YbbH n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001693BD8 Length = 265 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 74/265 (27%), Positives = 134/265 (50%), Gaps = 6/265 (2%) Query: 21 IADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASREK 80 +A ++ + E+ S+ ++A++ S ++I +F + L QGFT+ ++ L GE + Sbjct: 2 LASYIVEHAHEVVSMGITELAERSQTSPATISRFCKSLHFQGFTDFKLKLSGELAKQ--- 58 Query: 81 TNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPFIQI 140 + H + I + + L I + ++ T L D +LQ+ + + A I + Sbjct: 59 ---PSEHSYQDIVAGNPLSEIVSAIEANHLRSIADTTQLNDIKQLQQAVSALKNARQIDL 115 Query: 141 TGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVL 200 G+ S +V +D KL++IG R + +D H+Q T + L + DV AISYSG +E + Sbjct: 116 YGVATSGIVAQDFYQKLVRIGKRTSVFSDPHMQITSASNLGENDVVFAISYSGDTEETIQ 175 Query: 201 CAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDLLFV 260 A+++GA I++T +PL L+ L + E R M++R AQ V D+LF Sbjct: 176 ALRCAKERGAVTISLTKFGTNPLANLSDIRLFASTLEEGMRRGDMASRIAQLHVIDILFT 235 Query: 261 GLVQLNDVESLKMIQRSSELTQRLK 285 LV E + ++RS +L ++ + Sbjct: 236 SLVSEEFDELIPRLERSYQLVRKYR 260 >UniRef50_C6D7K6 Transcriptional regulator, RpiR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7K6_PAESJ Length = 284 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 74/280 (26%), Positives = 136/280 (48%), Gaps = 5/280 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + I + + FT E+K AD++ + + +S +A+ G+ ++SI +F + LG + Sbjct: 5 SITSTIHSHYNRFTATEKKTADYILEHADAVVYMSITDLAEGCGVGEASIFRFCKALGFK 64 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ + ++AL SA E L + D+LE K + AL +T L+ Sbjct: 65 GYQQFKIALAHSISADNE-----IPQLSGQVKIQDTLEDAVSKTLQSNINALNETFKLIQ 119 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + + I+++ ++ G+G S + + + K M+I + C D+H QA + + Sbjct: 120 LDSINRAIDLLIRSDRFIFYGVGSSLMTAMEANNKFMRITNKTGCSVDSHQQAMSAALMG 179 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 + DV I ISYSGS K+ + A+ A+++GA +I IT SPL + TL + E + Sbjct: 180 ERDVAIIISYSGSTKDSIEVAKKAKERGAAIIVITRFVKSPLTSYSDITLLCGANEGPLQ 239 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 S+S + AQ + D+L+V + S+ + +S Sbjct: 240 GGSLSAKIAQLYLLDVLYVEYFKRTYEASIVNKENTSAAV 279 >UniRef50_Q4LA29 Similar to transcriptional regulator n=1 Tax=Staphylococcus haemolyticus JCSC1435 RepID=Q4LA29_STAHJ Length = 283 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 73/282 (25%), Positives = 145/282 (51%), Gaps = 5/282 (1%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L I ++ S+ +E+++A+++ + E+ + S +++A +S +++V+ ++KL +GF Sbjct: 5 LIIIESSLSDLNPSERRVAEYILEHPDEIINYSVQKLADLTNVSVATVVRLSKKLKCKGF 64 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 +L++ + + + ++ I D S+E + + + L T +L Sbjct: 65 QDLKLKIAYDLNEP-----GNIQRGYAEIDKDYSIEEVTQTVFHNNTKTLRDTERILSTE 119 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 ++ E+I + I G+G SAL+ +D KL +I Y + Q T+S L Sbjct: 120 NIKHAFELIVNSRKTCIYGIGASALIAQDFKQKLTRIDYWCDVGSSFDEQVTLSANLSSE 179 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 DV IAIS SG K+IV + A+++GA VI+IT D+P+ L+ L S E RS Sbjct: 180 DVVIAISSSGQTKDIVNSTQLAKEKGAKVISITKYGDNPISNLSDVQLFVSSSEKAKRSG 239 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +MS+R A S+ D+L++ + + + + + ++ + + + K Sbjct: 240 AMSSRIAMLSIIDILYICIASNDYLSNRQKLENTRKAIKNNK 281 >UniRef50_C5CIM2 Transcriptional regulator, RpiR family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CIM2_KOSOT Length = 283 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 92/282 (32%), Positives = 147/282 (52%), Gaps = 7/282 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L I FT+ E+KIA F+ N ++ +S +++ L +S+ SIV+F QKLG Sbjct: 6 NVLLTIETLKDSFTKTEKKIATFVVKNPQKVVYMSLTEVSDILKVSEGSIVRFCQKLGYT 65 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF ++AL S ++E +++ +S L + + + ++ T + Sbjct: 66 GFHPFKIALA--VSENQESFSSSEFDFNSR-----DLSSLKNYVAQRHIDVIKNTSEFIS 118 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L+ +E I A I I+G+G S D +K M+IG D H+QA ++ L+ Sbjct: 119 EEILEACVEKILTARTILISGVGASGNTAHDAFYKFMRIGLNCKTSHDAHIQAMIASELR 178 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 +GDV +AIS SGS EIV A+ ARK GATVIAIT SPL R AH L T + E+ + Sbjct: 179 EGDVLLAISQSGSTLEIVDIADIARKGGATVIAITGYARSPLARFAHHVLLTPTRESPFE 238 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 S ++ ++ AQ V +LLF + + + K I+R+++ + Sbjct: 239 SGALRSKIAQLYVLELLFTAVFHRMEEKGRKFIERTADSVAK 280 >UniRef50_P44540 Uncharacterized HTH-type transcriptional regulator HI0143 n=33 Tax=Gammaproteobacteria RepID=Y143_HAEIN Length = 288 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 83/286 (29%), Positives = 148/286 (51%), Gaps = 5/286 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L KI + T++E+KIAD + + + S ++AK L + ++++V+F + +G + Sbjct: 6 NVLNKIGSLYQSLTKSEKKIADTILRSPDLVSQCSLSEIAKHLQVGEATLVRFCRTIGFK 65 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF+E ++ L E + K N L + I D IA+KL +E+T LLD Sbjct: 66 GFSEFKLELSIELAT---KDNQDESILETEIMPSDDSLTIAQKLQTAVANVMEETINLLD 122 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 +L+++++V+ KA I + G+G S + D KLM+IG++V + H + L Sbjct: 123 LKQLEEVVKVLKKARRIFLFGVGSSGVTAEDAKNKLMRIGFQVDASGNNHFMYMQAALLT 182 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV I +S+SG E + A++ GAT +A+T SP+ A + L + + + + Sbjct: 183 SSDVAIGLSHSGYSAETAHTIKIAKQNGATTVALTHSLRSPVTEYADYVLVNGNKQGKLQ 242 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT--QRLK 285 S+ T+ AQ V DL++ LVQ + + + Q++ + QR+K Sbjct: 243 GDSIGTKIAQLFVLDLIYALLVQGEEDIAAQTKQKTLNVILEQRIK 288 >UniRef50_B5I8T9 Sugar isomerase n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I8T9_9ACTO Length = 312 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 72/277 (25%), Positives = 142/277 (51%), Gaps = 1/277 (0%) Query: 5 TKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFT 64 T I + +K+ + + + + + S+ ++ ++ G SQ+++ +F + +G + + Sbjct: 26 TLIRTELPRLAGSLRKVGELILEDPAAVTHCSAAELGRRTGTSQATVTRFCRAIGLESYQ 85 Query: 65 ELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYAR 124 L + L E E ++ + + I+ DDSLE + + + A++QT +D Sbjct: 86 HLLIELAQERGRG-EVSDWGSAEIGPDISPDDSLERVVQVVGSADLRAIQQTIERIDLDA 144 Query: 125 LQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD 184 L++ + ++KA I + G+GGS V ++ +L +IG +V + H AT + L D Sbjct: 145 LERAAQALAKARRIDVYGVGGSGAVAQETETRLFRIGCQVRGWTEVHGAATSAALLTPAD 204 Query: 185 VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSS 244 V I IS+SG+ +E + E A+++GAT IAIT+ SPL + A L + + ET +R+ S Sbjct: 205 VAIGISHSGATRETLEPFEMAKERGATTIAITTDPRSPLAKAADIRLISATSETSFRTGS 264 Query: 245 MSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 + R + + D L+V + Q+ + + + +T Sbjct: 265 IGGRHSVLMIVDCLYVRVGQVAYQRASASLALTDHIT 301 >UniRef50_D2AR91 Putative transcriptional regulator, RpiR family n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AR91_STRRD Length = 299 Score = 263 bits (674), Expect = 4e-69, Method: Composition-based stats. Identities = 75/283 (26%), Positives = 132/283 (46%), Gaps = 5/283 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + + T Q IA + + + + + + G S+++IV+ A+ LG Sbjct: 11 NLVATVRAVLPSLTPAAQAIARLILDDPGMVARSTITEFSAVSGTSEATIVRTARALGFA 70 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+++LR AL + + + DD L + K+ R + AL T A L+ Sbjct: 71 GYSQLRFALAAAVAREE-----PERLVPGDLGPDDPLTDVIAKVTRAESEALADTAAQLN 125 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 RL ++E ++ A + + G+G S LV D++ KLM+IG D H+ T + L Sbjct: 126 PDRLGAVVEAMTAARRVDVYGVGASGLVAADMAQKLMRIGRSSHAFTDAHLALTSAALLG 185 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 +GDV + +S +G +++ ARK GAT +AIT+ S L LA L + ET +R Sbjct: 186 EGDVTVGVSCTGETPDVIAPMRVARKAGATTVAITNNPRSSLAELAEHVLVSAGRETAFR 245 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 ++++R +Q + D +FVG+ Q S ++ + Sbjct: 246 PGALASRISQLLIVDCIFVGIAQRTFETSDAALRATRGALDEF 288 >UniRef50_A8RRF4 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A8RRF4_9CLOT Length = 289 Score = 263 bits (674), Expect = 4e-69, Method: Composition-based stats. Identities = 80/282 (28%), Positives = 148/282 (52%), Gaps = 4/282 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L +I ++ + E+ + FL+ N E S +Q+A + S ++IV+ +K+G Sbjct: 3 SVLVRIQEYSAQASGAEKGVLRFLRENPEEAAGYSIKQLADKTFSSAATIVRLCRKMGFD 62 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ EL+ +L+ E + RE T + I DDSLE + K+ + ++L+ T L+D Sbjct: 63 GYKELQKSLLYESALRRESTRP----MEQEIKKDDSLEELVNKVTYKNIVSLDNTRKLVD 118 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L + +E++ ++ + + G+G S LV RD+ KL+++ D H Q ++ ++ Sbjct: 119 LDILNQCVELLDRSQTVYLFGIGSSLLVARDMYLKLLRVNKACVICDDWHAQLLQARNIR 178 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 D+ + +SYSG +E++ CA AR + A VI I+ SPL RLA + L + E +R Sbjct: 179 SCDLALIVSYSGLTEEMITCAREARLREAPVITISRFEQSPLVRLADYNLAVAATELIFR 238 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 S +MS+R +Q ++ D+L+ V E ++ +++ Sbjct: 239 SGAMSSRISQLNMIDILYTAYVHKRYDECMEQFRKTHIAKSE 280 >UniRef50_C6J4B4 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J4B4_9BACL Length = 288 Score = 263 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 72/279 (25%), Positives = 130/279 (46%), Gaps = 4/279 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L KI + T E+ +A+++ AN ++ +S + +AK S +S+++F + +G Sbjct: 7 NILIKIRDMKENLTPVERMVAEYILANTEDIPHLSIKSLAKLSKTSDASVLRFCKTMGYS 66 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ +++ + + ++ I D L+ I ++R ++E T ++LD Sbjct: 67 GYRSFIVSISAALGS----MDDERKDQYTDIQPGDDLDTIIANISRNNMKSIEDTLSVLD 122 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + + ++ + + I G+G S LV +D K +I D H Q T + L Sbjct: 123 RGEVARAVKALRASNRIVFFGIGASGLVCQDGEQKFSRINKMCHSYTDGHSQLTAATLLG 182 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 KGDV I +S SG+ EI+ E A+K AT +AIT S L A L + E R Sbjct: 183 KGDVAIFVSNSGNTLEIIETLEIAKKNNATTVAITKYNKSELADKADILLGISTPEITMR 242 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSEL 280 S +M +R A ++ D+LF G+ K + ++ + Sbjct: 243 SGAMGSRIAMLTIIDMLFAGVASAEYQNVKKYLTKTHSI 281 >UniRef50_B2TJ91 Transcriptional regulator, RpiR family n=1 Tax=Clostridium botulinum B str. Eklund 17B RepID=B2TJ91_CLOBB Length = 285 Score = 262 bits (671), Expect = 8e-69, Method: Composition-based stats. Identities = 75/276 (27%), Positives = 129/276 (46%), Gaps = 7/276 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L +I+N SE E+K+A ++ N + S ++A+ S++++ + KLG +G+ Sbjct: 10 LERITNIYSELKGAEKKVAQYVLENPKNIIHFSITELAEVSKASEATVFRLCSKLGYKGY 69 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 +L++ L G +++ + +D +I RK+ ++E T + Sbjct: 70 QDLKINLAG-------SVIEPIDNIYEEVKENDDTYIIMRKIMSSNINSIESTLKINKTE 122 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L K I +I A I G+GGS + D K ++ G D+H Q S G Sbjct: 123 DLDKAIAIILNAKKIMFFGMGGSWTIANDAYHKFIRTGIDCVASCDSHWQVMFSSMANSG 182 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 D IA S SGS KE+V A+K+G +IAIT SPL +++ L E+ +RS Sbjct: 183 DAIIAFSNSGSNKELVENINLAKKRGIKIIAITGNEKSPLAKISDLHLIAYGNESMFRSE 242 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSE 279 +M +R + D L+VG+ ++L ++R Sbjct: 243 AMESRLTSLMIVDWLYVGVAIKRKDKTLGNLERIRN 278 >UniRef50_A9KIQ0 Transcriptional regulator, RpiR family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIQ0_CLOPH Length = 284 Score = 262 bits (670), Expect = 9e-69, Method: Composition-based stats. Identities = 69/280 (24%), Positives = 136/280 (48%), Gaps = 4/280 (1%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 +I ++ S+FT++E+ +ADF+ N ++ S +A+ G+ +++ +F + L G Sbjct: 5 IFARIESSYSKFTKSEKIVADFVFENPEKVLYTSITDLAEICGVGDTTVFRFCKALKLNG 64 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 + E +M L + + + ++ S++ DD ++ I +K AL +T L++ Sbjct: 65 YQEFKMFLAQDIAVR----TGSDYTINGSVSQDDDIQTICKKALAVDIAALTETFEGLNF 120 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 + K++++IS A +Q G+G S ++ + K M+I V AD H+Q + L Sbjct: 121 EAVTKVVDMISNANKVQFFGMGSSGVIALEAKMKFMRILPNVEHIADCHMQFMSAALLSS 180 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 D+ I SYSGS K+ + A A+ G V++IT +S L ++ + S E Sbjct: 181 RDLAIIFSYSGSTKDSIEIANLAKSNGCKVVSITRYVNSHLANISDVVIPCGSNEGPLDG 240 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 + ST Q + D+L++ + +S +++E Sbjct: 241 GASSTSMVQFYILDILYLLYFTKHYHQSKLNKAKTTESIS 280 >UniRef50_A5L3V2 Transcriptional regulator, RpiR family protein n=3 Tax=Vibrionales RepID=A5L3V2_9GAMM Length = 282 Score = 262 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 97/285 (34%), Positives = 169/285 (59%), Gaps = 4/285 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M + K+ + + ++ +A ++ + +++ +SS ++AK +G+SQS+IVKF+QK+G Sbjct: 1 MKGIAKVKALLPKLSPSDSLVARYVLDHPQQVKQLSSPELAKAVGVSQSTIVKFSQKIGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF+E+++ L Y + + +H +IT DS + + KL K +LE+T L Sbjct: 61 KGFSEMKVKL---YQSDMSYQPVSQRGIHGTITRKDSPDTVMEKLLASKTQSLERTVLLN 117 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + +L +++ A IQI+G+G S+LV +D ++KLMKIG+ V E D H+Q + +L Sbjct: 118 EGEQLSNAADLLHLANKIQISGVGASSLVAKDFAYKLMKIGHAVHAEPDAHIQIANAASL 177 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + DV +AISYSG +E+V A+ AR + A VI I+ L+ S L + A L + + E Sbjct: 178 TENDVLVAISYSGKTREVVKVAQLARSKKAKVIVISQLSPSALDKYADIKLISAADENHI 237 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 RSSS++ R +Q +TDLLF+ L Q + ++ ++I++S K Sbjct: 238 RSSSITARDSQFYITDLLFIALTQ-QEEQADQLIEQSKSAVAEFK 281 >UniRef50_C4DDH7 Transcriptional regulator, RpiR family n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DDH7_9ACTO Length = 342 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 74/282 (26%), Positives = 135/282 (47%), Gaps = 1/282 (0%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L ++ A +E++IA+ + + ++ ++A S +++V+F Q++G Sbjct: 11 TVLVRVRAALPGLRPSERRIAEAILDDPHATAGLTVAELAAACDTSTTTVVRFYQRIGYG 70 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 + +LR+ L E + + A I DD+++ I K+ + L++ T +LD Sbjct: 71 RYKDLRLDLTRE-ATREQLETANLPAASGDIDRDDTIDDIIAKVAANETLSIADTAEILD 129 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L + ++ + A + G+G S VG DL KL +IG DT + + L Sbjct: 130 RDALARAVDCVLNARRVDSFGVGASGFVGLDLQQKLTRIGRTALSWLDTDAAWSAAVTLD 189 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 + V IAIS++G+ V A +GAT IAIT+ ++ L A L T + ET +R Sbjct: 190 EQCVAIAISHTGTTAATVEFLAMAAAEGATTIAITNHDNTALAETADVVLTTAARETRFR 249 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 S ++ +R AQ V D LF G+ + + S+ ++++ R Sbjct: 250 SGALGSRIAQLMVVDCLFTGVARASYDASMSALRKTYAAVHR 291 >UniRef50_A9KMQ5 Transcriptional regulator, RpiR family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KMQ5_CLOPH Length = 285 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 85/283 (30%), Positives = 147/283 (51%), Gaps = 3/283 (1%) Query: 1 MLYLT-KISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLG 59 M + K + +E+K+A + N+ + S+ ++A++ G+SQ + ++F + +G Sbjct: 1 MTNIEIKTRSIMDSLNNSERKVATYFLNNIENIFSIPIARLAEESGVSQVTWIRFCKAIG 60 Query: 60 AQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCAL 119 G +L+ +L E ++S + T+ S I +LE + + A+E T L Sbjct: 61 FDGLKDLKKSLFMELNSSTSEGIDTSDF--SDIKKHSTLEQMCNTIRNTTLQAVEDTIKL 118 Query: 120 LDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQA 179 +DY L+K++ ++SKA I++ G+G SALV D KL++I V D H Q Sbjct: 119 IDYDTLKKVVSILSKASCIKLFGVGASALVADDFCKKLLRINKNVNFSYDMHTQLVYGAN 178 Query: 180 LKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETE 239 + DV + SYSG+ KE++ + A+K I IT T SPL A +++ + E Sbjct: 179 ARPEDVAVIFSYSGTTKEMLEIMDLAKKSNCPTIVITKYTKSPLVASADYSIYISAPEIN 238 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 +RS +MS+R AQ ++ DLLF L N K +++SSE+ + Sbjct: 239 YRSGAMSSRIAQLTIVDLLFTSLANKNYTSVEKYLEKSSEVCR 281 >UniRef50_B4EZY5 RpiR-family transcriptional regulator n=54 Tax=Gammaproteobacteria RepID=B4EZY5_PROMH Length = 295 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 81/282 (28%), Positives = 139/282 (49%), Gaps = 3/282 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L + + T Q+IAD++ + +E+ +S Q+++ ++++V+F + LG + Sbjct: 13 KILDTLGAMKNSLTRVSQRIADYILFHPTEVTQLSIAQLSQATKAGEATVVRFCRTLGYK 72 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF + +M L E + S N + L + ++ D + I KL L +T LLD Sbjct: 73 GFQDFKMDLAIEMATSD---NDESPILDAEVSHQDDIHTIGLKLQATINNVLSETLNLLD 129 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 ++Q + + A ++ I G+G S + DL KLM+IGYRV + H + LK Sbjct: 130 MQQVQGAVNALLSANYVFICGVGSSGITAEDLKNKLMRIGYRVDAVTNNHFMYMQASLLK 189 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 GDV I IS+SG+ E V + A++ GA+ IA+T S + A L + + + + Sbjct: 190 SGDVAIGISHSGNSLETVHALKLAKEAGASTIALTHNLGSQIMEYADHHLINGNRQGKLQ 249 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 S+ T+TAQ V DLL+ LVQ + R+ ++ Sbjct: 250 GDSIGTKTAQLFVLDLLYTLLVQAKPETVKEQKLRTLNALKQ 291 >UniRef50_C1PDB4 Transcriptional regulator, RpiR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PDB4_BACCO Length = 283 Score = 260 bits (666), Expect = 3e-68, Method: Composition-based stats. Identities = 80/278 (28%), Positives = 140/278 (50%), Gaps = 7/278 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L +I SEF+ E+KIAD++ N L + Q+A QL ++ +++ +F +++G GF Sbjct: 11 LHRIQTMYSEFSAKERKIADYILENPQRLVHSTINQVADQLLVADATVFRFCKRIGFSGF 70 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 L++AL E + ++ ++ D+ + +A K+ L+ T L+ Sbjct: 71 QALKIALAAEAAR-------PGKNMDEAVKDTDNEKAVAIKVFESNIETLQDTIHTLNQK 123 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L + +E I +A I G G ++++ D K ++ V D H+Q + K Sbjct: 124 HLHEAVEWICRAKHIVFYGCGSASVIALDALEKFLQTDLAVTAYTDPHLQLLSAARCTKE 183 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 DV + IS++G+ KE++ +A +K GA IAIT SPL + A L TVS E ++R S Sbjct: 184 DVAVFISHAGADKEMLKLLQAVQKTGAKTIAITQFAKSPLSQKADVPLFTVSQEADFRFS 243 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 S S R Q S+ D L+V ++ + +++Q+ E Sbjct: 244 SFSARIVQLSLIDTLYVNVMLRYKDTNEEILQKGKETY 281 >UniRef50_C2D8M2 Possible transcriptional regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D8M2_9ACTN Length = 291 Score = 260 bits (665), Expect = 4e-68, Method: Composition-based stats. Identities = 66/277 (23%), Positives = 132/277 (47%), Gaps = 4/277 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + ++ E+ +A ++ E +S + +A + +S +++V+ + +G + Sbjct: 3 NIIIRLRENIGFLNPAEKAVARYVLQCPHESNRLSVKALAARSFVSPAAVVRMCKSIGFE 62 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF E + L E + + I +D+LE I +K+ + +L L+D Sbjct: 63 GFKEFKTELTRELATEK----LILPLDTKDIKQNDTLESIIKKITLKNIHSLYDALRLID 118 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 ++K +E++ I + GLG S + +D + K +++ D H+Q ++ Sbjct: 119 PETIEKAVELLQACDRILLFGLGASLIAAKDANLKFLRVNKTCLINDDWHLQLITARNST 178 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV I ISYSG E + CAE + +IAIT +SP+ +LA L T S E+ +R Sbjct: 179 SQDVGIVISYSGQTAETLTCAEILKHNNTPIIAITRCIESPISKLADVLLYTTSNESLFR 238 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSS 278 S++MS+R +Q ++ D+L+ + ++ + ++ Sbjct: 239 SAAMSSRISQLNIIDILYTAFAVSDYEKNFTYLSKTR 275 >UniRef50_D1YCB1 Transcriptional regulator, RpiR family n=3 Tax=Propionibacterium acnes RepID=D1YCB1_PROAC Length = 290 Score = 260 bits (665), Expect = 4e-68, Method: Composition-based stats. Identities = 96/284 (33%), Positives = 152/284 (53%), Gaps = 3/284 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L +I A + E ++A + A + S+ Q+A+ G+S +++V+F + LG Sbjct: 4 SLLPRIDMARTTMRPAEAQVAAVILAKPDWTLAASTSQLAEAAGVSPATVVRFCRALGMS 63 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ ELR L + S + +++ +IT DDSL + K+ + +E T +D Sbjct: 64 GYRELRTELARDLSRRTLELERSSV-AEGTITLDDSLTQMITKIAFHEARTIENTARAVD 122 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L+ + IS AP + G+G S LV DLS KL +IG DTH+Q + K Sbjct: 123 ADELEAVASAISIAPRTALFGVGSSGLVASDLSEKLERIGLVCQHHQDTHMQLVHAALCK 182 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 + V + IS+SG+ +E+V A+K GAT +A+T L DSP+ RLA L T + ET+ R Sbjct: 183 RPCVALGISFSGNTQEVVEALTVAQKHGATTVAMTGLPDSPVGRLADHVLVTSARETQVR 242 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQL--NDVESLKMIQRSSELTQR 283 + +MS+R AQ +V D LF + QL +D+E+L R++ T R Sbjct: 243 AGAMSSRMAQLAVVDFLFARVAQLCMDDLETLLSSTRTAVSTHR 286 >UniRef50_A6LRF3 Transcriptional regulator, RpiR family n=2 Tax=Bacteria RepID=A6LRF3_CLOB8 Length = 294 Score = 260 bits (664), Expect = 5e-68, Method: Composition-based stats. Identities = 76/283 (26%), Positives = 153/283 (54%), Gaps = 1/283 (0%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 Y KI N + +E+K+AD++ N + +++ ++++Q+G+S+ +I++F + +G Sbjct: 6 SYEYKIKNMYNLLRSSEKKVADYVLLNGHSVSTMTLAELSRQVGVSEPTIIRFVKSIGCS 65 Query: 62 GFTELRMALIGEYS-ASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 G++E +MAL+ E+ S +K + L + I D+ +E + K+ ALE T ++ Sbjct: 66 GYSEFKMALMKEWGRESVDKQYDSKLLVELHIDRDEKIEDVPVKMIGLTIKALEDTLKII 125 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D + +K IE+I + I + G+G S V D+ K ++IG +D+++Q + L Sbjct: 126 DINKYKKAIEMIRSSNIIDVYGVGNSGSVASDIRNKFLRIGLECRAYSDSNIQQICASHL 185 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 D+ I +S+SGS + V + A++ GA IA+T+ + A T T ET + Sbjct: 186 TSNDLAIGVSHSGSTIDTVNALKIAKESGARTIALTNFKAPAISEYADITFFTGGEETTF 245 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 S +M +R +Q ++ D+L++G++ + K +++ + L + Sbjct: 246 YSETMVSRISQLAIVDMLYMGILLDDYDLYTKRLEKINLLLKE 288 >UniRef50_B1YJ20 Transcriptional regulator, RpiR family n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YJ20_EXIS2 Length = 284 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 78/283 (27%), Positives = 147/283 (51%), Gaps = 8/283 (2%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 ++IS E + +K+ADF+ A+++E+ ++ +A++ G S +++V+F + LG +G Sbjct: 5 IFSQISAVHEELPSSSRKVADFVLAHMNEIAGMTIHHLAEESGTSAAAVVRFCRALGLKG 64 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 + ELRM + + + T L + I ++ + K AL+ T L Sbjct: 65 YPELRMRISADTAR-------TDLKGYHDIEKNERPADLVEKTVSNSIQALQDTAKQLSE 117 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 R+ + +V+ +A I G+G S +V D + K ++G E+D H+ AT+ + Sbjct: 118 DRIAEAADVLDQARAIYFYGIGASNVVALDAAQKWTRVGKLTIQESDQHLVATILANASQ 177 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTV-SGETEWR 241 DV AISYSG +E+V A+ +G VI++T D+ + +LA L T + E R Sbjct: 178 DDVFFAISYSGETEEVVELIRLAKIRGLKVISLTRFGDNRVSQLADIALWTSRAPEAPLR 237 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 S+++S+R AQ D+LF+ ++ ++++ +Q + E + L Sbjct: 238 SAALSSRLAQLFAIDVLFLSYAAVHYDDTIERLQYTRESVKML 280 >UniRef50_A4TMJ1 RpiR-family transcriptional regulatory protein n=22 Tax=Gammaproteobacteria RepID=A4TMJ1_YERPP Length = 292 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 71/283 (25%), Positives = 138/283 (48%), Gaps = 3/283 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L + + T + Q+IA ++ A +++ +S ++ +++I++F + LG + Sbjct: 12 KILDALGAMQNSLTRSAQRIAAYILAQPAQVTQLSIADLSALTQAGEATIIRFCRTLGYK 71 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF + +M L E + N+ L + + D I KL L +T LL Sbjct: 72 GFQDFKMDLAIEVATRHNSENSL---LDADVQEGDDTLAIGSKLQSAINNVLSETLNLLS 128 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 ++++++V+ A I I G+G S + D KLM+IG RV + H + + Sbjct: 129 IESVEQVVKVLRPADRICIFGVGSSGITAEDAKGKLMRIGLRVDAATNNHFMYMQASLMN 188 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 GDV I IS+SG+ E V + A++ GAT +A+T S + LA + L + + + + Sbjct: 189 PGDVAIGISHSGTSAETVQALKLAKEAGATTVALTHNMGSRITELADYVLINGNRQGQLQ 248 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 S+ T+ AQ V DL++ LV+ + ++ + +++++ + Sbjct: 249 GDSIGTKIAQLFVLDLIYALLVKADPAQAESIKRKTTQAVSQN 291 >UniRef50_B6ITC5 HTH-type transcriptional regulator hexR, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6ITC5_RHOCS Length = 280 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 72/280 (25%), Positives = 127/280 (45%), Gaps = 8/280 (2%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 L +I + +EQKIAD + + + S ++A +SQ ++V+F + +G G Sbjct: 1 MLDRIRSMRPGLRRSEQKIADIVLRQPHAVVNASVAELAHDADVSQPTVVRFCRSIGCSG 60 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 + + ++ L + +A + + DD + IA KL AL + L+ Sbjct: 61 YQDFKLRLAQDLAAGPARPEDA-------VRPDDPVAEIAAKLLNRSIGALTRLRNQLNP 113 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 L+ ++V+++ + G G S +V D K ++G V D+HVQA + L Sbjct: 114 DALEAAVQVLTETRRLDCYGFGASGVVALDAQNKFFRLGLPVVAHTDSHVQAMAAALLGP 173 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 V +A+S SG +E++ + A GA VIAIT+ SPL A L + E Sbjct: 174 QGVALAVSRSGRTRELLRSVDLALAGGARVIAITA-GGSPLAGRATVPLLVDAPEDSSPY 232 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 + M++R A +V D+L V V + ++R + + Sbjct: 233 TPMTSRIAHLAVVDILQVATALRRGVHTGDPLRRPAAALR 272 >UniRef50_A6LUR0 Transcriptional regulator, RpiR family n=2 Tax=Clostridium RepID=A6LUR0_CLOB8 Length = 281 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 87/285 (30%), Positives = 153/285 (53%), Gaps = 5/285 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L I FT+ E+ IAD+L + S+S+R +A+ S ++V+FA+K+G Sbjct: 1 MNVLQYIKQNYDSFTDREKLIADYLIETKERIISMSARDIAEATKTSAPTVVRFAKKIGF 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 EL++ L S E +L + + + + + I + ++ +EQT +LL Sbjct: 61 NTLNELKLKLSINISKEEEAGAIQFQYLDNDLGTKNIIYGIKQSVDSI----MEQTVSLL 116 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D L K IE++ A I I +G S LVG+D +KL ++ R C DTH+Q T S L Sbjct: 117 DEECLDKAIELLISAKNIYIFSVGVSGLVGQDFYYKLSRMNKRCICNTDTHLQITSSVLL 176 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAIT-SLTDSPLRRLAHFTLDTVSGETE 239 ++GDV +AISYSG KE++ C + AR + VIAIT + ++ + ++ + + E Sbjct: 177 EEGDVALAISYSGETKEVIKCVKNARNRKVPVIAITKASVNNTIADISDIVIRIPAVEKS 236 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 R ++S+R +Q ++ D+L++G+++ N E + + + + + L Sbjct: 237 IREGAISSRISQLAIIDMLYIGMIRNNIKEVEEKLISTRKAVKEL 281 >UniRef50_A8RI47 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RI47_9CLOT Length = 285 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 76/285 (26%), Positives = 148/285 (51%), Gaps = 8/285 (2%) Query: 2 LYLTKISNAGSEFTE-NEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 Y ++ + + NE KI +F++ N E+ +S A+ G+S+++IV++AQKLG Sbjct: 7 SYQLRVQSILPSINKKNEMKIYEFIEINRKEIIHMSVADAAEACGVSEAAIVRYAQKLGY 66 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +G+ +++++ + ++ ++ ++ D++ I K+ +L T +L Sbjct: 67 KGYQAMKISIAQDVIEPGQQ-------IYGQLSKGDTIPTIVDKIFDSNIQSLRDTSDVL 119 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + + + +I + G+GGS V D K +KIGY D+++QA + L Sbjct: 120 SRENIDEAVNLILGCRRLLFFGVGGSGCVAMDGQHKFLKIGYMAMAFTDSNLQAMAASVL 179 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 DV +A+S+SG+ K+I++ + A++ GA IAIT+ SP+ A L T S ET + Sbjct: 180 TSRDVLVAVSHSGASKDILMAMDIAKQSGAKTIAITNYGKSPIVEKADVVLYTSSNETAF 239 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S ++S+R A+ ++ D+L++G+ ES I ++ + K Sbjct: 240 NSDALSSRIAELTIIDMLYIGVSYKRYDESYANILKTRKALDSTK 284 >UniRef50_Q9CKN4 Putative uncharacterized protein n=1 Tax=Pasteurella multocida RepID=Q9CKN4_PASMU Length = 286 Score = 257 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 114/284 (40%), Positives = 182/284 (64%), Gaps = 2/284 (0%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M +L K+ + + NEQ+IADF+ + E++S SS+ +A Q+ +SQS+I+KF+QKLGA Sbjct: 1 MGFLIKLKHTYPSLSPNEQRIADFILKHPHEVKSSSSKALANQIAVSQSAIIKFSQKLGA 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 F++ ++A+ E +E + +HLH SIT D L IA KL EK+ AL+++ +L Sbjct: 61 DKFSDFKLAI-SEALIRQETQSEPRVHLHDSITDKDDLSEIAEKLFVEKQQALKESLSLN 119 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + +++E + +A IQ+ G+G SALV +D +KL KIG V E DTH +SQ+L Sbjct: 120 AIPYVARVVEQLMQAKRIQLMGIGNSALVAKDFFYKLTKIGLPVVTETDTHASLAMSQSL 179 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 D+ IS+SG +EI+L AE A+ + +IA+T+LT +PL LA + L +V+ E+ + Sbjct: 180 TPQDILFLISFSGRHREILLAAENAKARQIKIIALTALTTNPLHELADYLLYSVADESTF 239 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 RSSS+++RTAQ+++TDLLF+G++Q + +I S L +L Sbjct: 240 RSSSIASRTAQHAITDLLFMGILQ-QKEHANDLILESRALIGQL 282 >UniRef50_A6LVH8 Transcriptional regulator, RpiR family n=8 Tax=Firmicutes RepID=A6LVH8_CLOB8 Length = 282 Score = 257 bits (656), Expect = 4e-67, Method: Composition-based stats. Identities = 82/280 (29%), Positives = 142/280 (50%), Gaps = 6/280 (2%) Query: 6 KISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTE 65 KI + + + EQ IAD++ N + S ++ +L ++ S++ +FA+KLG GF E Sbjct: 8 KIKSLYNGLSAKEQNIADYILENPISVAHNSISYLSDELNVADSTLFQFAKKLGYSGFKE 67 Query: 66 LRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARL 125 +MA++ E + N + +H I DD+ +A+K+ L T +L L Sbjct: 68 FKMAILIE------ENNFSTTSIHEKIEIDDNELTMAQKVFDSNIKTLTNTKKILGLDDL 121 Query: 126 QKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDV 185 +K E+IS + + G+GGS ++ D K ++ V D H+Q + L D Sbjct: 122 KKAAEIISNSNLLYFFGVGGSGILAEDAYHKFLRSPAHVRHSTDYHIQLMEASLLTPQDC 181 Query: 186 QIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSM 245 I IS++G KE + AE ++ GA VI ITS SPL ++ ++S E E+ S ++ Sbjct: 182 AICISHTGKSKETIRIAEIVKEAGAKVIVITSHASSPLAKIGDVVFISISEEIEFHSEAL 241 Query: 246 STRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S+R +Q S+ D L+V L+ +N +S + + + +K Sbjct: 242 SSRISQLSILDSLYVILMFMNKEKSKEALSKVRRTIWDVK 281 >UniRef50_B0N1V0 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0N1V0_9FIRM Length = 277 Score = 256 bits (654), Expect = 7e-67, Method: Composition-based stats. Identities = 84/284 (29%), Positives = 152/284 (53%), Gaps = 7/284 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M KI A S +T E+ IA ++ N +++ S++ + ++ G S ++I++F++KLG Sbjct: 1 MNSYAKIKEAQSSYTSTEKVIAKYILENAADVLKCSAQSLGEKTGTSAAAIIRFSKKLGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF+EL+M+L A EK + I +D + +A K R + +T L+ Sbjct: 61 NGFSELKMSLAQSKRAPEEKIDFI-------IDENDDIVTLADKCCRLNMNTVLKTYQLI 113 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D +L I+ + A I + G+GGSA+V +D+ KL +IG +V D HVQ T S+++ Sbjct: 114 DTNQLDNAIKKLIAANTIYLFGVGGSAIVAQDVEQKLTRIGKKVIYNKDLHVQLTFSESM 173 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 K D + ISYSG+ K +V A+ + + +I+IT +PL +L+ L + E E Sbjct: 174 NKEDAALFISYSGTTKGLVEIAKMIKNKNVPIISITQFKPNPLSKLSDIILQVPNEEKEI 233 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 R ++S+R + +TDLL+ G+ + + + + + + ++ Sbjct: 234 RMGAISSRISSLVMTDLLYYGVFKNDLTGNKDKLIETKRIVSKI 277 >UniRef50_C9AZQ1 Phosphosugar isomerase transcriptional regulator n=2 Tax=Enterococcus casseliflavus RepID=C9AZQ1_ENTCA Length = 283 Score = 255 bits (653), Expect = 9e-67, Method: Composition-based stats. Identities = 80/280 (28%), Positives = 147/280 (52%), Gaps = 6/280 (2%) Query: 6 KISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTE 65 +I + + EQ IAD++ N S++ S ++ +LGI+ S+ +F +KLG GF + Sbjct: 8 QIKTLYKDLSLKEQAIADYILENPSKVSHSSISDLSNELGIADSTFFQFTKKLGYNGFKD 67 Query: 66 LRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARL 125 +MA++ ++ + +A+ +H +I D+ +A+K+ L T LL L Sbjct: 68 FKMAML------MQENDFSAISIHENIQKSDNELTMAQKVFDSNMTTLTDTKNLLKEEDL 121 Query: 126 QKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDV 185 + +I+++ + G+GGS +V D K ++ V +D H+Q + L D Sbjct: 122 KLAAAMINQSKRLFFFGVGGSEIVATDAYHKFLRSPITVFHSSDYHIQLMEASLLTPDDC 181 Query: 186 QIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSM 245 I IS++G +E + A+ A+ GA +I ITS SPL +L ++S ETE+RS ++ Sbjct: 182 GIFISHTGKSRETIELAQVAKNNGAKIIVITSHAASPLAKLGDVVFISISEETEFRSEAL 241 Query: 246 STRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 ++R AQ S+ D L+V L+ +N ++ + I + ++K Sbjct: 242 ASRIAQLSIMDSLYVILMFINRDKAQQSIAKIRRSISKIK 281 >UniRef50_C8W838 Transcriptional regulator, RpiR family n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W838_ATOPD Length = 304 Score = 255 bits (653), Expect = 9e-67, Method: Composition-based stats. Identities = 81/269 (30%), Positives = 135/269 (50%), Gaps = 5/269 (1%) Query: 6 KISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTE 65 ++ + E+ I D++ ++ + S ++A Q S S++V+ +KLG G+ E Sbjct: 7 RLEEYRKNASSAERDIIDYILSDPEAVVGQSIHKLAAQTYTSASTVVRLCKKLGCGGYKE 66 Query: 66 LRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARL 125 + ALI E + S + + + + D+ +VI K+ + +LE T LLD + Sbjct: 67 FQQALIYELAVSNKSNDIAV----GGVIAGDTTDVIIEKVTAKNISSLELTMQLLDAQVV 122 Query: 126 QKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDV 185 ++ ++ +A I + G+G S LV RDL KLM++ D H Q ++ + + D+ Sbjct: 123 DSVVSLMMQAHSICLFGMGASLLVARDLQLKLMRLNINCNLSDDYHSQLLYAKNMSREDL 182 Query: 186 QIAISYSGSKKEIVLCAEAARKQGATVIAITSLT-DSPLRRLAHFTLDTVSGETEWRSSS 244 I +SYSG +E + CA A+ GA VI+IT DS L + + L E RS + Sbjct: 183 AIVVSYSGLTREAIECAWIAKANGAKVISITRGGIDSELIHRSDYVLGVAETEHIMRSGA 242 Query: 245 MSTRTAQNSVTDLLFVGLVQLNDVESLKM 273 MS+R AQ +V D LF V N +S+K Sbjct: 243 MSSRIAQLNVVDALFAAYVNRNYEKSVKR 271 >UniRef50_C0D6A5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D6A5_9CLOT Length = 282 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 73/278 (26%), Positives = 138/278 (49%), Gaps = 3/278 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L K+ + + E ++ +++ ++ + ++AK+ S +++V+ +K+ Sbjct: 6 MSVLIKLRD-YRNLSAAENQVREYILKYPKKVLEYTVYELAKESFTSPATVVRLCKKIDI 64 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF L++ L E ++ L ++I +DS I K+ +E+T L+ Sbjct: 65 KGFARLKVLLAEETKYFQDMK--LNLLDTTTIEKNDSPHAIIEKITNIAVKTIEETRVLV 122 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + + ++ ++ KA + G+G S+ V D +K M+IG V Q + Sbjct: 123 NEKQFMQVARLLQKAVIVDFYGVGASSPVAIDAQYKFMRIGKNVITYQLYDRQYVQAVNS 182 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 V I ISYSG KE++ A +K G V+A+TS ++ L R+A + L + ET + Sbjct: 183 DASHVGIIISYSGETKEMLKIAGILQKNGTPVVAVTSSGENSLNRIADYNLFVTAKETVF 242 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSS 278 RS +M++RTAQ + D+L+ L+ ES+K IQ++ Sbjct: 243 RSGAMASRTAQLYIIDILYALYCSLDYDESIKKIQQTR 280 >UniRef50_C6XNZ1 Transcriptional regulator, RpiR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNZ1_HIRBI Length = 297 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 71/279 (25%), Positives = 138/279 (49%), Gaps = 7/279 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 +++I + IAD++ + + + +S ++A+ G S+ S++ ++LG Sbjct: 20 NVISRIRIRKDSLGPSTSTIADYVLGHANAVVGMSVTELAEATGTSEGSVINLCRQLGLS 79 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF +L+++L E +H + D + +K+ AL +T ++LD Sbjct: 80 GFQQLKLSLAQEVVR-------PVQFIHEDLQPSDDTSTVCQKMFHAGSEALRETLSILD 132 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + ++VI A ++I G+G SA + D +++++IG D+H+QA + Sbjct: 133 PDAISMAVDVIRSADRVEIYGIGSSAPIAEDAQYRMLRIGLDAKVVVDSHIQAISASRTG 192 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 + IS+SGS E + AR GA I IT+ SPL+ A L T++ ET++R Sbjct: 193 PNVAVLTISHSGSTHETLAATRLARDAGAKTIIITNFASSPLQAYADVKLYTMARETKFR 252 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSEL 280 S +M++R AQ + D+L L + + +++++SE+ Sbjct: 253 SEAMTSRIAQLCILDVLIAALALDDYERATTVLRQTSEV 291 >UniRef50_UPI0001789683 transcriptional regulator, RpiR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789683 Length = 289 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 73/275 (26%), Positives = 148/275 (53%), Gaps = 7/275 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L IS+ S T+ E+K+AD+++ E + ++++ G+ ++S+++F +KLG +GF Sbjct: 14 LLMISSIYSSLTKTEKKVADYVKGFPEETVLATVTDLSEKAGVGETSVIRFCRKLGFRGF 73 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 E ++++ + + + +SI D L +ARKL + E+ L+ T L++ Sbjct: 74 HEFKLSVAQDL------VDRPPSVVDTSIDEQDDLMTVARKLTMQHEILLKNTLDLVNAD 127 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L+ ++ + A + + G+G S + DL ++LM++G V D+H+ A + +KKG Sbjct: 128 NLRMAVDKLLAANKVYVYGVGSSGITALDLHYQLMRLGLNVEAHRDSHIIAMSASLVKKG 187 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 D+ AIS SGS +++V + A+K GA VI +T SP+ A L S E Sbjct: 188 DLVFAISTSGSTRDLVDAVKEAKKNGADVICLTGHLRSPIATYADTVLLVSSREMPTEGG 247 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSS 278 +++T+ Q + ++L L+ + ++ + +++++ Sbjct: 248 ALATKFMQTYMLNIL-TTLLTMKKEDASESLKKTA 281 >UniRef50_C2L140 RpiR family transcriptional regulator n=6 Tax=Clostridiales RepID=C2L140_9FIRM Length = 285 Score = 252 bits (645), Expect = 8e-66, Method: Composition-based stats. Identities = 66/280 (23%), Positives = 140/280 (50%), Gaps = 2/280 (0%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 +LTKI +A ++FT+ E+K+AD++ N ++ +S +A+ + +S+ +F + + +G Sbjct: 5 FLTKIRSAYNQFTKAEKKVADYILQNPDQVLFMSISDLAETCKVGDTSVFRFCKTMNVKG 64 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 + E +M L S + + D+++ +A K+ E ++++T +LLD+ Sbjct: 65 YQEFKMTLS--LSMRGNGKESKEGDGGNVSLQDNNIAELAGKVLEETIDSIKETHSLLDF 122 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 ++ + + +SKA I G+G S L K +I +V C Q + +++ Sbjct: 123 NKVTEAMNALSKAKRILFFGVGASMLTAMKAMNKFHRIEPKVYCSEMVSQQLMSAATMER 182 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 GDV + SYSG+ ++IV A+ A++ GATV++IT S L L + + Sbjct: 183 GDVAVIFSYSGATRDIVEIAKLAKESGATVVSITRFQKSELTDYTDILLLCGANVGSLQK 242 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 S S +Q + D+++ + + +++++++ + Sbjct: 243 GSTSAEISQLFLVDIMYTEYYRRHYEYCNQILEKTTVAIK 282 >UniRef50_C8NZR0 RpiR family transcriptional regulator n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZR0_ERYRH Length = 280 Score = 252 bits (645), Expect = 9e-66, Method: Composition-based stats. Identities = 82/285 (28%), Positives = 158/285 (55%), Gaps = 7/285 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M + +I +T+ E++IA+++ N E+ + SS+ AK++ S ++IV+F++K+G Sbjct: 1 MSCIYRIKENMHTYTDTEKRIAEYILENKDEVVNFSSQHFAKEINSSAAAIVRFSKKIGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GFT L++ L ++S + + I +D++E + RK + + T LL Sbjct: 61 NGFTHLKVELARDHSEEEQSFDKL-------IKEEDTIETMVRKSHYSNHRTFDNTYKLL 113 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + L I IS A I + G+GGS +V +DL K ++I V D H++ + + Sbjct: 114 NLEVLDASIAAISNARRIYLLGIGGSGIVCQDLYHKFVRIDADVVYFDDFHLEMSSLTHI 173 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + DV IA+SYSG +EI++ + A+ +GAT IAIT + + L + + F ++ E+E Sbjct: 174 TENDVTIALSYSGQTREIIMAQKLAQDKGATTIAITQVGRNELAKNSDFVINIPKEESEV 233 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 R S+++R + +++DLL++G+ + N E+ + I + + + ++ Sbjct: 234 RLGSIASRFSMLAISDLLYLGVAKNNIEETRRKIVNTRDTIKSIR 278 >UniRef50_Q45581 Uncharacterized HTH-type transcriptional regulator ybbH n=7 Tax=Bacillaceae RepID=YBBH_BACSU Length = 283 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 72/283 (25%), Positives = 140/283 (49%), Gaps = 8/283 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L I + + +E+K+AD++ A+ + + +++ S +++++ + LG +GF Sbjct: 6 LAIIQSMKHKLPPSERKLADYILAHPHKAIESTVNEISALANSSDAAVIRLCKSLGLKGF 65 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 +L+M + G+ + + I + L I+ K A++ T L+DY Sbjct: 66 QDLKMRVAGDLAK-------PTFQGYRDIVPHEPLPSISEKTAGNAIQAIQDTSDLMDYK 118 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L++ + ++ KA + GLG S +V +D K ++I + DTH+ A++ K Sbjct: 119 ELERAVSLLLKAHTVHFIGLGASGIVAKDAQQKWLRIHKQATAFTDTHLVASLIANADKD 178 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTV-SGETEWRS 242 D+ AIS+SG +EIV A+++G T I++T + + + LA L T S E RS Sbjct: 179 DIVFAISFSGETQEIVELFAMAKEKGITTISLTQFSQTSVSALADVPLYTAHSNEALIRS 238 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 ++ S+R AQ + D+LF+G+ + I ++ Q ++ Sbjct: 239 AATSSRLAQLFIIDVLFLGMAAEQYETTTGYIDKTRAAIQSMR 281 >UniRef50_C4FUK3 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FUK3_9FIRM Length = 280 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 80/285 (28%), Positives = 142/285 (49%), Gaps = 7/285 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M +TKI +A T EQ I ++ + E+ +++ ++ G S ++ +FA+K+G Sbjct: 1 MSCITKIKSALESMTATEQMIGRYILEHRHEVLEMNTLELGWASGTSGAAWTRFAKKMGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +G L++ L + +T+ + + D+L + K E L +T L+ Sbjct: 61 KGLPALKLDLAQD------RTDEEMPEVDLFLDPRDTLGALLHKTQTILEQNLRRTYELI 114 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D A L + I++++ A + + G+GGS +V DL KL +I V + DTHV Sbjct: 115 DEAVLAQAIDMMASAHRLFLCGIGGSGIVCMDLVHKLTRINRPVTYDRDTHVLMAQMAHC 174 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITS-LTDSPLRRLAHFTLDTVSGETE 239 GDV + +SYSG+ + A A++QGA +IAIT +PL LA L E E Sbjct: 175 MPGDVVLVVSYSGNTHTVNQMAYLAKEQGAKIIAITGHNLKAPLASLADVCLFIPRDEKE 234 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 R S+++R VTDLL+ G+ Q + + + ++ ++ +++ Sbjct: 235 IRLGSVTSRDGSLIVTDLLYYGVAQRQFHATKEHLVKTRKMIRKI 279 >UniRef50_A1JQZ2 RpiR family regulatory protein n=12 Tax=Enterobacteriaceae RepID=A1JQZ2_YERE8 Length = 286 Score = 251 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 115/284 (40%), Positives = 180/284 (63%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L +I+ E EN++KIA + N + S+SS Q A+ G+SQS+IVKF+QK+G Sbjct: 1 MSILNEITWLLPELAENQKKIAKCILDNPESILSISSSQFAEDAGVSQSAIVKFSQKIGM 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF L++A+ E S + + LH+SI+ +DSL V+A+KL EK ++ +T + Sbjct: 61 KGFPALKIAISEELSRNNLFKSYPHKALHNSISPEDSLMVMAQKLAHEKTASIMETTRKI 120 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 +++ Q+++ +I+ A +QI G+ G+ L +DLS+KL KIG EAD HVQ + L Sbjct: 121 NFSVFQQVVSLINAAQRVQIVGIWGAGLTAKDLSYKLQKIGIMTLVEADLHVQIAAALTL 180 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 DVQI +S++G +K++ + A A+ QGATVIAIT SPL ++A + L+++S E EW Sbjct: 181 TPKDVQIVLSFTGRRKDMKIAATVAKAQGATVIAITGSKVSPLAKIADYVLESISDENEW 240 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 RSSS+S+RTAQN++TDL+F+ L+Q + +I +S L Sbjct: 241 RSSSISSRTAQNTLTDLIFLALMQQRKEMAKPLILNASMTINNL 284 >UniRef50_C3RKW6 Sugar isomerase n=3 Tax=Bacteria RepID=C3RKW6_9MOLU Length = 291 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 79/278 (28%), Positives = 145/278 (52%), Gaps = 5/278 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M +T++ +F+ +E+ IA ++ N ++ ++S +++AKQ S ++IV+ +KLG Sbjct: 1 MSIMTQLEFEL-DFSSSEKTIAKYILDNGEDILNLSVKELAKQTYTSPATIVRLCRKLGL 59 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 G+ + ++ E +K N + ++ + DS IA ++ + A+E T L+ Sbjct: 60 NGYGDFKIKYSAELQ--FDKKNKKRVDVNFPFGNTDSNSQIAYRIANLHQEAIEDTLNLV 117 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D+ L KII ++ +A I + G G S L G D K+M+IG V A Q +S Sbjct: 118 DFKNLDKIINLLDQARRIYLFGNGNSLLAGFDFQHKMMRIGKMVEMRAHAGEQGFLSYTC 177 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 DV I ISYSG E+V A+ +K ++ ITS+ D+ L + + ++T S E + Sbjct: 178 SPDDVAILISYSGETNEMVELAKFLKKMHVPLLGITSIGDNQLSKYCTYIMNTGSREKIF 237 Query: 241 -RSSSMSTRTAQNSVTDLLFVGLVQLNDVESL-KMIQR 276 + + S++T+ + + DL+F + +LN + + I R Sbjct: 238 SKIAPYSSKTSISYLLDLIFSCIFRLNYDHYINEKINR 275 >UniRef50_Q1LPJ6 Transcriptional regulator, RpiR family n=6 Tax=Burkholderiaceae RepID=Q1LPJ6_RALME Length = 338 Score = 249 bits (637), Expect = 7e-65, Method: Composition-based stats. Identities = 65/274 (23%), Positives = 122/274 (44%), Gaps = 8/274 (2%) Query: 5 TKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFT 64 +I +E+++AD++ + + + ++ ++A + G+SQ +I +F LG GF Sbjct: 3 DRILAVYDSLRPSERRLADYVARHGASVIRLTMPELADRAGVSQPTIARFCAALGYDGFK 62 Query: 65 ELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYAR 124 E ++ +H + +DD IA K+ L L + Sbjct: 63 EFKLQFAQNVGGG-------TPFVHQDVEADDRPADIAGKVFDRTIATLMSVRNALSADQ 115 Query: 125 LQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD 184 ++ I +++ A I+ G G S +V D+ K ++G +D HV + + L+ GD Sbjct: 116 IEHGIRLLAGARRIEFYGCGNSGIVALDIQHKFFRLGIPTTAYSDPHVFSMSAALLRPGD 175 Query: 185 VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSS 244 V + +S SG +++ A AR GA+V+A+T SPL RLA + + E + Sbjct: 176 VAVLVSNSGRTWDMLTAATLARSSGASVLALTHSG-SPLARLADVCVFSDVEEDSEVYTP 234 Query: 245 MSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSS 278 M++R + D+L G+ +QR+ Sbjct: 235 MTSRICHLVLGDVLAAGVALDRADSVAAGLQRAK 268 >UniRef50_C6L9A2 Transcriptional regulator, RpiR family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L9A2_9FIRM Length = 336 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 70/262 (26%), Positives = 122/262 (46%), Gaps = 3/262 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L I+ T + +K+AD++ AN +E Q +S +A+ G+S+++I +F +KLG Sbjct: 55 NILDLITEQYPTLTRSGKKLADYIFANTTETQYLSISALAENSGVSEATITRFCRKLGLS 114 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ + ++A+ + S+ITS DSL I +KL L+L +T LLD Sbjct: 115 GYNDFKLAIAK---SDHVTDMGEPSGSPSTITSQDSLPDIFQKLLSANILSLTETFDLLD 171 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + + ++++ A + G G S+++ + + R AD+H+Q Sbjct: 172 EKEISRAVDLLYGAHHVYCLGNGSSSVMAMEAWARFSTASTRFIHIADSHMQMLSIALAT 231 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV + SYSG+ +++ A K+ VI +T S A TL E+ + Sbjct: 232 PQDVILFFSYSGATRDMEDIMNIAHKRKIPVILVTHFPKSQAAAFADVTLLCGYNESPLQ 291 Query: 242 SSSMSTRTAQNSVTDLLFVGLV 263 S S++ R Q + D LF G Sbjct: 292 SGSIAARMGQMLIIDCLFHGFC 313 >UniRef50_A7VQA6 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQA6_9CLOT Length = 290 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 72/285 (25%), Positives = 139/285 (48%), Gaps = 7/285 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M +I S + +KIADF+ + + ++ Q+A+ +S++S+V+F Q L Sbjct: 12 MGCTERIQATYSALSGASKKIADFVIDHPDQAVHMTVVQLAESCEVSEASVVRFCQCLQY 71 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF E +++L E + + + IT +D+ I K+ ++ AL++T +L Sbjct: 72 AGFYEFKLSLAAEIVPASQM-------IQEDITVEDTEPTILEKVFAGEQQALQETLQML 124 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + + I+ + ++ G + + +D ++L++ G D + + L Sbjct: 125 NRQDFISAVNHIAFSNKVEFFSCGNARPIAQDAHYRLLRTGIDSRIGIDDYDCLIHASML 184 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + GDV I IS+SGS K + E A+K GAT I IT + +P+ R++ + + S ET + Sbjct: 185 RTGDVAIGISHSGSTKNTIKMLEEAKKNGATTICITGMEKAPITRVSDICMVSHSKETMF 244 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 RS +M++R AQ ++ D L V + S + + + ++ K Sbjct: 245 RSMAMASRIAQMAIIDALVVAVSFKRFERSKQYLTLTDKILVEDK 289 >UniRef50_Q2G836 Transcriptional regulator, RpiR family n=4 Tax=Proteobacteria RepID=Q2G836_NOVAD Length = 296 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 75/274 (27%), Positives = 138/274 (50%), Gaps = 7/274 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 LT+I +A + ++ KIA ++ + +++ +S +A + S+ S++ F + +G GF Sbjct: 21 LTRIRSALPQMSKTAAKIAAYVVEHPADVVGMSITDLAALVDASEGSVINFCRSIGLGGF 80 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 L+++L E +H + +DS E + RK+ AL + ++LD Sbjct: 81 QHLKLSLAQEIVQ-------PVHFIHEDLEREDSTETVCRKVFHSGIQALRDSLSVLDPK 133 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 + +++I A ++I G+G SA + D ++L++IG D+HVQA + K Sbjct: 134 AMAAAVDIIRAARRVEIYGIGSSAPIAEDAHYRLLRIGLDARVVIDSHVQAISASRCDKD 193 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 + IS+SGS E V A + GA I IT+ SP++ A L T++ ET +R+ Sbjct: 194 VAVLTISHSGSTNETVAATRLAHEAGARTIVITNFGRSPIQAYADVVLFTMARETRFRTE 253 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRS 277 +M++R AQ V D L L + S +++++ Sbjct: 254 AMTSRIAQLCVIDALIAALALADYDRSTDVLKQT 287 >UniRef50_B6GA31 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GA31_9ACTN Length = 281 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 75/276 (27%), Positives = 133/276 (48%), Gaps = 5/276 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L ++ + E+++ + + + + +S ++A +S S+I + +KLG + Sbjct: 3 SLLVRLKQYRDNASPAERELIERILDDPESISGLSIHELAAYAFVSPSTITRLCKKLGLK 62 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ E + LI + + RE +++ + D+ K+ R+ +L L D Sbjct: 63 GYKEFQHLLIYDLALLRESSSSKI----EDLAPTDTSRQTIEKVTRDNIDSLRLVEKLND 118 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + ++++S A I + G+G S L RD+ +KL++IG D H Q + Sbjct: 119 PETYEACVDLMSDARTINLFGMGASLLSARDMHYKLLRIGVSCNLIDDWHGQLLCASNSG 178 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLT-DSPLRRLAHFTLDTVSGETEW 240 D+ IAISYSG +E+ +C AR++G VIAIT DS L R A L S E Sbjct: 179 PEDLSIAISYSGLTEEVNVCVGRARERGGKVIAITGSAFDSKLARQADEVLLVGSTEPLM 238 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQR 276 RS++M++R Q V D+LF V N +++++ Sbjct: 239 RSAAMASRIGQLGVIDILFKSFVNRNYARFSEVLEQ 274 >UniRef50_C4KZ09 Transcriptional regulator, RpiR family n=85 Tax=Bacillales RepID=C4KZ09_EXISA Length = 301 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 77/284 (27%), Positives = 152/284 (53%), Gaps = 5/284 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 LTKI A + T E+KIAD++ ++ + + +++++++A++ +S++SIV+FA+ +G Sbjct: 22 SLLTKIDLAKEDMTAVEKKIADYILSHSTLIPNMTTKELAQKTDVSEASIVRFARVVGID 81 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 F ++AL+ + + + T L + + D+ +K+ + A+E +D Sbjct: 82 SFKAFKLALVKDLAVTE-----TTLTDFNVLQQKDTPYDSFQKVIHVNKAAIEACAEAMD 136 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L+ +++ ++A + G+GGS+ D +K K+GY D H ++ L Sbjct: 137 KRELEHAVDLFARASRVIFYGVGGSSTAAIDAQYKFTKLGYAATTSPDFHYMLSLIPHLG 196 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 K DV +AIS SG K+++ A+K+ VIAIT+L SPL R A L T + E+++R Sbjct: 197 KSDVFVAISTSGRTKDVLELVRFAKKKRVPVIAITNLDKSPLYREADVRLCTPNVESDFR 256 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +S+++R Q ++ D L++GL+ + + + +L+ Sbjct: 257 IASIASRMTQLTIIDTLYMGLLHRKGEGLIDRYAEARDEMVKLR 300 >UniRef50_A8FIY5 Possible RpiR family transcriptional regulator n=4 Tax=Firmicutes RepID=A8FIY5_BACP2 Length = 286 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 65/284 (22%), Positives = 140/284 (49%), Gaps = 6/284 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + I + ++KIA+++ N ++ S +A + S+++I +F +K+G + Sbjct: 8 NIFSHIRTTFHSLSPTQKKIANYILENPQKVVLHSISALASECNTSETTIFRFLRKIGYE 67 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 + R+ + + + + T ++ I + DS+ I K+ +++ +++ Sbjct: 68 SYQVFRVHVAQDIATN------TPQSIYGEIEASDSVADIKHKVIELTTNSIQDMKHIVE 121 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + + IE + +A G G S+ + D K +++G+ V+ +D H+ ++ Sbjct: 122 DHAVTQFIEQMKQAHKTVFFGAGASSFIAGDAYHKFLQLGFDVSLCSDPHMMNMIATHAT 181 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 + D +AIS+SG +EI+ + A+++GA + +ITS S L + + F L + S ET +R Sbjct: 182 EHDFIVAISHSGESREILDAVQFAKEKGAKIASITSYPKSELAKRSDFHLLSSSRETTYR 241 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S SM +R Q + D+L+V V +++ ++RS + K Sbjct: 242 SDSMISRINQLVIIDVLYVAAVLELGSNAIENVKRSRLAVAKNK 285 >UniRef50_UPI000196C511 hypothetical protein CATMIT_02677 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C511 Length = 286 Score = 247 bits (630), Expect = 5e-64, Method: Composition-based stats. Identities = 78/285 (27%), Positives = 154/285 (54%), Gaps = 8/285 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M +I +T E+ IA+++ N ++ S++ + ++ S ++I++F++K+G Sbjct: 9 MNAYIRIKEYNDSYTATEKLIAEYILEN--DILQDSAQALGEKTNTSAAAIIRFSKKIGF 66 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF++L+M L +++ + +D++ + K R + +T L+ Sbjct: 67 KGFSDLKMNLAQSTKEEKQQ------EVDLIFEPEDNISTLVEKGCRLNMNTVLKTYQLI 120 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + L++ I++++ A I + G+GGS+++G D+ KLM+IG +V AD HVQ T +Q++ Sbjct: 121 NIDTLEESIDLLNNASTIYLFGVGGSSVIGLDIYQKLMRIGKKVIYNADLHVQMTFAQSM 180 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + D + ISYSGS +V A ++ VI+IT + +P+ +L+ ++L S E Sbjct: 181 DQNDAALIISYSGSTTGLVDVARVLHEKQIPVISITQINANPISKLSTYSLKVPSEEKAL 240 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 R ++S+R + +TDLL+ G+ + N E K + S + LK Sbjct: 241 RIGAVSSRISSFVITDLLYYGVFKKNFEEHKKNLIDSKDNVSILK 285 >UniRef50_D1ALE3 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ALE3_SEBTE Length = 282 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 66/272 (24%), Positives = 141/272 (51%), Gaps = 5/272 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 KI++ FT +E K+ ++++ N + ++ R+++ + +++I++F +K G + Sbjct: 7 NLFNKINSLKKSFTASETKVFNYIEKNPESVVRMNIRELSNAIDTGETTIIRFCKKTGFK 66 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ + +++LI S ++ I +D++ IA + L+ T +L++ Sbjct: 67 GYNDFKISLISSLSKEKQSNKYKI-----DILADENYNSIAEGIYNNSFNVLKDTLSLIN 121 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L K I +I+ A I+ G+G S L +D +K ++IG VA +D H+ + Sbjct: 122 NEILDKCINLINNAKHIEFIGIGHSNLTAQDAKYKFLRIGKSVASHSDPHLFKMAASISD 181 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 + DV I IS +G +E++ ++A+ +GA IAIT+ + + + A + L E Sbjct: 182 REDVIIGISQTGETREVIDSLQSAKVRGAKTIAITNNDKTEITKYADYVLLNGFNEELLE 241 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKM 273 + S S R +Q + +LL++G++ N +++++ Sbjct: 242 TGSFSERISQLFIIELLYLGVLSKNKDKAMEL 273 >UniRef50_A4VXR0 Transcriptional regulator n=5 Tax=Streptococcus suis RepID=A4VXR0_STRSY Length = 275 Score = 246 bits (629), Expect = 6e-64, Method: Composition-based stats. Identities = 74/279 (26%), Positives = 145/279 (51%), Gaps = 9/279 (3%) Query: 7 ISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTEL 66 ++++ T E K+ D+++ N+ +++++ Q+A G+S ++I + ++K+G F +L Sbjct: 6 LNHSIENLTPTENKLLDYIEENIHRIETMNIYQLADNAGVSTATISRISKKMGYSNFNKL 65 Query: 67 RMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQ 126 ++ + + L++ T DS++ I+ KL ++ +QT + L+ L+ Sbjct: 66 KIEIAK---------SKYDDLLNAHFTPSDSIDDISTKLIHSITISNQQTVSFLNLEELE 116 Query: 127 KIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQ 186 ++++ A I + G+G S +V D +KL +IG DTH+Q GD+ Sbjct: 117 AAVKLLQSASRIYLFGVGASGIVCSDFYYKLSRIGKTCIFAQDTHIQMANIATAGNGDLA 176 Query: 187 IAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMS 246 I ISYSG KE+V A++ G + I IT + L LA T E E R +++ Sbjct: 177 IGISYSGMTKEVVEPLRFAKENGVSTITITGTGKNQLADLADITFRIPRHEHELRVGAIT 236 Query: 247 TRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +R+ +TDLL++ L+Q + E +++++ LT+ +K Sbjct: 237 SRSNSLFLTDLLYLALIQDHKQEITAILEQTKHLTEVIK 275 >UniRef50_A4EAC5 Putative uncharacterized protein n=2 Tax=Collinsella RepID=A4EAC5_9ACTN Length = 283 Score = 246 bits (629), Expect = 7e-64, Method: Composition-based stats. Identities = 76/265 (28%), Positives = 133/265 (50%), Gaps = 5/265 (1%) Query: 15 TENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEY 74 + E+ + ++ A+ E+ +S R +A S SSI++F ++LG G+ E + LI E Sbjct: 17 SPAERNVIAYVSAHPHEVVGLSVRGLADVTFSSPSSILRFCKRLGFAGYKEFQRELIAEL 76 Query: 75 SASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISK 134 + +K + I+ DDS+E I K+ + +E T LDY L++ + + Sbjct: 77 ALLGDKKDVAL----EDISMDDSVERIVGKVMKSNVRTIEATARTLDYTVLERCAARLKR 132 Query: 135 APFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGS 194 A + + G+G S LV DL+ KLM++ D H Q ++ + +GD+ IA SYSG Sbjct: 133 ARAVNLFGIGASRLVAHDLAQKLMRVDKECRLYDDWHDQLLCAKNMHEGDMAIAFSYSGL 192 Query: 195 KKEIVLCAEAARKQGATVIAITS-LTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNS 253 +E++ C A++ V+A+T S L +A L + E RS +M++R AQ Sbjct: 193 TQEVLDCTAEAQRHNCPVVAVTKVDGSSKLATMADAVLGVAASEPLVRSGAMASRMAQLM 252 Query: 254 VTDLLFVGLVQLNDVESLKMIQRSS 278 V D L+ V + + +I+++ Sbjct: 253 VVDALYAAYVASDYERATHVIKQNY 277 >UniRef50_A8RWE9 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RWE9_9CLOT Length = 301 Score = 246 bits (628), Expect = 8e-64, Method: Composition-based stats. Identities = 72/279 (25%), Positives = 140/279 (50%), Gaps = 7/279 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 ++ ++ E + A+++ A+ +L S +A++ G S++++ + KLG + Sbjct: 24 TLYDRVEEKRGSLSKKELETAEYMAAHQEQLIYSSITDLAERAGSSEATVTRVCGKLGYR 83 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF L++ + E + +EK +H ++ +D EVI K+ L T ++ Sbjct: 84 GFQALKVGVARELTTPQEK-------IHENLEADSPAEVIIEKIFSSAIETLSMTQKSIN 136 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + I+ + +A I I G G SA + D K +++ D H+Q ++ Sbjct: 137 VKAVAASIDALCRARRIIIIGNGNSASIAADAQHKFLRLDLNAHAYTDDHMQMIAVSSMT 196 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV +AISYSGS + +V A A++QGATVI++T+ SP+ +LA L+T S ET +R Sbjct: 197 DQDVLLAISYSGSSRNVVEAAHQAKEQGATVISLTNEGSSPVSKLADICLNTYSQETRYR 256 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSEL 280 + ++S+R A+ ++ D ++ G+ +++ + Sbjct: 257 TYAISSRMAELTIIDTIYTGVALRLGDKAIANFEALERA 295 >UniRef50_A1AYM0 Transcriptional regulator, RpiR family n=3 Tax=Proteobacteria RepID=A1AYM0_PARDP Length = 287 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 78/278 (28%), Positives = 135/278 (48%), Gaps = 7/278 (2%) Query: 5 TKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFT 64 +I T E ++ D + + + RQ+++ G+S + +VK A+KLG GF Sbjct: 12 AQIRMKLPFLTPLEARVVDTITGRNDLDLTTALRQVSEDAGVSDAMVVKIAKKLGFNGFR 71 Query: 65 ELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYAR 124 + R AL+ LHS I+ +DS I RK+ + ALE+T +++D + Sbjct: 72 DFREALVVYRQT-------DVASLHSEISPEDSSADIIRKVFQTSIQALEETMSIIDVSA 124 Query: 125 LQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD 184 + ++ A G+GGSA + RD++ K ++IG R + D H+ + L D Sbjct: 125 FDRAATLLHGARQRDFYGVGGSAQIARDVAHKFLRIGLRAGVQDDPHMMLMSAALLGPED 184 Query: 185 VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSS 244 V +A S+SG+ ++ A AR+QGA VIAIT+ +PL LA L + + + + Sbjct: 185 VVVAFSHSGTTSNVIEAARLARQQGARVIAITNYATAPLSELADIALCSTAQGSPLLGEN 244 Query: 245 MSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 + R AQ ++ D +FV + Q + + + R+ Sbjct: 245 AAARIAQLNIMDAIFVAVAQRDLERAEAQLARTRNAVD 282 >UniRef50_B5HLI6 RpiR-family transcriptional regulator n=3 Tax=Streptomyces RepID=B5HLI6_9ACTO Length = 317 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 79/280 (28%), Positives = 145/280 (51%), Gaps = 4/280 (1%) Query: 5 TKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFT 64 K+ G T + ++A+ + A+ + +++ +A++ G S++++V+ A+ LG G+ Sbjct: 37 AKVRTLGPSMTRSMHRVAEAVAADPAGCAALTVTGLAERTGTSEATVVRTARLLGYPGYR 96 Query: 65 ELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYAR 124 + + + ++ + A + + I DD + + KL +++ L T A LD A+ Sbjct: 97 D---LRLALAGLAAQQQSGRAPAITTDIAVDDPIADVVAKLAYDEQQTLADTAAGLDTAQ 153 Query: 125 LQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD 184 L + + A I + G+G S LV +DL+ KL++IG +D H+ T + L+ GD Sbjct: 154 LGAAVAATASARRIDVYGVGASGLVAQDLTQKLLRIGLIAQAHSDPHLAVTNAVQLRSGD 213 Query: 185 VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVS-GETEWRSS 243 V IAI++SG+ +++ A + GAT +AIT D + + A L T + E+E R + Sbjct: 214 VAIAITHSGATGDVIEPLRVAFEHGATTVAITGRPDGAVTQYADHVLTTSTARESELRPA 273 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 +MS+RT+Q V D LFVG+ Q + + S E Sbjct: 274 AMSSRTSQLLVVDCLFVGVAQRTYETAAPALAASYEALAH 313 >UniRef50_D0W145 Transcriptional regulator HexR n=3 Tax=Neisseriaceae RepID=D0W145_NEICI Length = 315 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 70/279 (25%), Positives = 131/279 (46%), Gaps = 7/279 (2%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 L+KIS + ++ + E+K+A+ A + ++A+ +SQ ++++F + LG +G Sbjct: 1 MLSKISESLADLSGAERKVAECALAKPKWFVHAAVAEIAEHSSVSQPTVIRFCRSLGYKG 60 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 E ++AL + ++H + +DD + + K+ +L L Sbjct: 61 LPEFKLALSASIG------HEGMPYVHEELNADDDMSSVVEKVLGNAAASLLGERRFLKE 114 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 + L+ I + A ++ G+G S +V +D K + G DTH Q + L Sbjct: 115 SELENAIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYVDTHTQLMAASVLSS 174 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 DV IAIS +GS E++ A++ GA++IA+T +SPL ++A L + E Sbjct: 175 EDVLIAISNTGSSIELLDAVSIAKENGASIIALTRN-ESPLAQMADCVLSIATQENAELY 233 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 + M +R Q +V D+L +GL + +Q+S + Sbjct: 234 TPMVSRLLQLAVIDILAIGLALRLGDAASLQLQKSKKAY 272 >UniRef50_C2C2H3 Bifunctional RpiR family transcriptional regulator/sugar isomerase n=1 Tax=Listeria grayi DSM 20601 RepID=C2C2H3_LISGR Length = 282 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 77/285 (27%), Positives = 141/285 (49%), Gaps = 9/285 (3%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L +I + ++E+K+A+ + + + + S +AK+ S ++IV+F + LG + Sbjct: 5 SILNRIETLFKDLPKSEKKVAEMVLQDPAFASASSIHSLAKRADTSAAAIVRFCKSLGLK 64 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 F + + L E S+ + D+S + I++KL L T + Sbjct: 65 SFPDFKRQLYSELSS-------PVASGYYDFEEDESFDGISQKLLANYFQTLNDTAGQIS 117 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 A+++ + E + KA I G+G S LV +D++ K ++ G +V D HV A A K Sbjct: 118 EAKIRTVSEQLEKADTIYTYGVGASWLVAQDIAQKWLRAGKQVVISQDEHVLAMAFAARK 177 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTV-SGETEW 240 G V A+S SG ++ AE A++ TVI +T S L+ A F L+T + E ++ Sbjct: 178 SG-VFFAVSNSGETTSVIELAEQAKQNNLTVIGLTRFGPSKLKAKADFLLETSRAPEAKF 236 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 RS++ S++ AQ + D+L+ V + + ++ I+ S + T R + Sbjct: 237 RSTATSSKQAQFFIIDVLYYHYVSRHYDQMIEQIRESRQATDRFR 281 >UniRef50_D1AUV3 Transcriptional regulator, RpiR family n=5 Tax=Bacteria RepID=D1AUV3_STRM9 Length = 272 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 58/281 (20%), Positives = 129/281 (45%), Gaps = 14/281 (4%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M Y+T I + F++ E K+AD++ + + ++ K++ +S+++IV+F +K+G Sbjct: 1 MKYITLIQSFYPSFSKQEIKVADYVIKEKDAICFMPLHEITKKINVSEATIVRFVKKIGF 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF + ++ + E + ++ N ++ + ++ T L+ Sbjct: 61 KGFIDFKLEVAREIATIEDERNTKEHYI--------------ENIEYNIIETIKNTKNLI 106 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + ++ IE I + + + G+G S + + + M+ G +D H Q + Sbjct: 107 NKEDVENAIEAIENSKKLYVFGMGASGVAALEFQNRFMRFGKIGHSVSDGHFQVMYASTT 166 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + DV + IS SG +++ A++ G +IAIT+ SP+ +L+ + T ET Sbjct: 167 TEKDVIVVISLSGETVDLIYPLSIAKENGCKIIAITNYILSPIAKLSDIVILTSGKETLL 226 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 ++ ++ +Q + D+L G N ++ + Q +E Sbjct: 227 NGGALVSKMSQLYIIDVLATGYALRNSKKAKLVRQGMAEAI 267 >UniRef50_Q9K6Z8 Transcriptional regulator (Hex regulon repressor) n=2 Tax=Bacillus RepID=Q9K6Z8_BACHD Length = 284 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 77/282 (27%), Positives = 147/282 (52%), Gaps = 5/282 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + L KI + F E K+A+++ + + +++++Q+A+Q SQSSIV+F ++LG + Sbjct: 5 MLLAKIEQELASFPAAETKVANYVLKHPELVPTMTTKQLAEQANASQSSIVRFCKRLGLE 64 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 F +L++AL E + N+ +L + +DDS ++ +K++ ++AL+ ++ Sbjct: 65 SFPKLKLALAKELTRKEAYINSASL-----LETDDSPPILFQKVSSLNQMALDMATKAMN 119 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + +E + KA I G+GGS D +K M++G+ D H + Sbjct: 120 EQAFTEAVEQMVKAKKIAFFGVGGSFTSCIDGQYKFMRLGFHSLASGDYHQMIPFITMMD 179 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 + DV I +S SG+ KE++ A+ A+++ +I IT+ + S L R A +L E + R Sbjct: 180 EQDVVICMSTSGNTKEVLDIADYAKERNVKLIGITASSRSALTRKAAVSLLIPDIEVQQR 239 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 S+++RT+Q +V D L+V + + L S + T+ Sbjct: 240 IGSIASRTSQLNVIDALYVSVFHRIGSDLLDAFDASRKKTEE 281 >UniRef50_A9M040 RpiR/YebK/YfhH family transcriptional regulator n=24 Tax=Neisseria RepID=A9M040_NEIM0 Length = 282 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 72/280 (25%), Positives = 131/280 (46%), Gaps = 7/280 (2%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 L+KIS + + + E+K+A+ A + ++A++ +SQ ++++F + LG +G Sbjct: 1 MLSKISESLANLSGAERKVAECALAEPKWFVHAAVAEIAERASVSQPTVIRFCRSLGYKG 60 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 E ++AL + ++H + +DD + + K+ +L L Sbjct: 61 LPEFKLALSASIG------HEGMPYVHEELNADDDMASVVEKVLGNAAASLLGERRFLKE 114 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 + L+ I + A ++ G+G S +V +D K + G DTH Q + L Sbjct: 115 SELENAIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYVDTHTQLMAASVLSD 174 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 DV +AIS +GS E++ A++ GA+VIA+T DSPL +LA L + E Sbjct: 175 QDVLVAISNTGSSIELLDAVSIAKENGASVIALTRN-DSPLAQLADCVLSVATQENAELY 233 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 + M +R Q +V D+L +GL + +Q+S + Sbjct: 234 TPMVSRLLQLAVIDILAIGLALRLGDAASLQLQKSKKSIH 273 >UniRef50_A0AJB4 Complete genome n=7 Tax=Bacillales RepID=A0AJB4_LISW6 Length = 283 Score = 243 bits (622), Expect = 4e-63, Method: Composition-based stats. Identities = 76/285 (26%), Positives = 134/285 (47%), Gaps = 8/285 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + +I + +E+KI + AN + S ++A++ S +++V+F + +G Q Sbjct: 5 SIINRIEGILHDLPTSEKKIGQTVLANPEFTTTASIHKLAQKADASGAAVVRFCKSIGLQ 64 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 F EL+ L + + ++ + I ++ I KL + T + LD Sbjct: 65 SFPELKRQLSLDLAQPQK-------IGYYDIEPNEDFHTITDKLVSNMMQTMNDTASQLD 117 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 ++ +++ A I G+G S LV D+S K ++ G V D HV A K Sbjct: 118 ETKVLTACDLLGDADTIYTYGVGASWLVAEDISQKWLRAGKHVLATQDAHVLAMAFATGK 177 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTV-SGETEW 240 + V IAIS SG E++ + A+ TVI++T ++ L+ A L+T + E E Sbjct: 178 RKSVFIAISNSGETSEVLQLVDQAKLNDVTVISLTRFGNNKLKEKADLALETSRAPEAEI 237 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 RS++ S+R AQ V D+LF + E ++ I++S E T R + Sbjct: 238 RSTATSSRQAQLLVVDILFYYYASHHYDEMIQQIKQSREATNRFR 282 >UniRef50_D0GPL3 Transcriptional regulator, RpiR family n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GPL3_9FUSO Length = 285 Score = 243 bits (621), Expect = 5e-63, Method: Composition-based stats. Identities = 71/285 (24%), Positives = 148/285 (51%), Gaps = 9/285 (3%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M + I ++ ++ E+ IAD++ N+++ +++ +A+ +G+ S+I F +KLG Sbjct: 6 MKF--TIKTIYNDLSKKEKLIADYILKNINKSTNLTIADLAENIGVVNSTIFSFTKKLGF 63 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF E R +L+ + S +++H I+ +DS+ I K+ +LE T + Sbjct: 64 KGFREFRDSLLRDQFNSN-------INVHEKISKNDSITSIIEKVFNSNIKSLEDTKKIA 116 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + ++++++ + G+GGS+++ D K ++ + ++D H+Q + L Sbjct: 117 EKKSFSTALKILTQVDIVHFFGVGGSSVIAHDAYHKFLRSPLKCRFDSDFHLQLMQASLL 176 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 K D IS+SG KE + A+ A+++ A +I +TS S L + A T + + E E+ Sbjct: 177 TKNDCAFIISHSGMTKESIEIADIAKERKAKIIVLTSYPLSILAKKADITFISTAEEIEY 236 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 RS ++S+R AQ S+ D +F+ ++ N ++ + + + K Sbjct: 237 RSEALSSRIAQLSILDTIFILVMLNNPTKTQISLNKIRTTIAKTK 281 >UniRef50_D2PUN7 Transcriptional regulator, RpiR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PUN7_9ACTO Length = 294 Score = 243 bits (620), Expect = 6e-63, Method: Composition-based stats. Identities = 76/263 (28%), Positives = 124/263 (47%), Gaps = 2/263 (0%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 T+I T EQ++A+ + A+ + Q+A++ S +++ +F + LG G Sbjct: 4 IETRIRGLVPTLTPAEQRVAEQVLADPLGTHRGTIGQLAERSRTSLTTVTRFCRALGMAG 63 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 + ELR AL E A + L + I DD ++ + L AL++T + LD Sbjct: 64 YQELRFALATE--AGEASSRDWTLGAAADIGPDDPMQSVLANLVATDVRALQETASQLDL 121 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 A +++++ I+ A + + + GSA V DL +L ++G D H + L Sbjct: 122 AVAEQLVDAITTARRVDLYAVSGSAAVTNDLQRRLHQLGITCHLWIDVHDALASATLLGP 181 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 DV I IS+SG E++ AAR GA A+T+ S + +A L T + E +RS Sbjct: 182 EDVAIGISHSGETIEVIEPLTAARDAGAVTAAVTNFPRSAITSVAGLLLTTSAREATYRS 241 Query: 243 SSMSTRTAQNSVTDLLFVGLVQL 265 S+S R Q V D L G+ Q Sbjct: 242 GSLSGRHTQLLVIDCLVTGVAQR 264 >UniRef50_C3RM33 Sugar isomerase n=2 Tax=Bacteria RepID=C3RM33_9MOLU Length = 312 Score = 243 bits (620), Expect = 6e-63, Method: Composition-based stats. Identities = 67/284 (23%), Positives = 136/284 (47%), Gaps = 4/284 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L K+ A +F+ +E+ IA ++ N ++ ++S+ Q+AK S ++I + QKL Sbjct: 1 MSLLRKLEMAV-DFSTSEKLIATYILKNGPDVLNMSTSQLAKATYTSPATITRLCQKLEY 59 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +G+ + ++AL + + ++ + T + D++ I + + ++ T + Sbjct: 60 KGYNDFKIALSAQLQYTFDRNSETNPNF--PFKKRDTIHTIKHSIATLAKDSINLTVNNI 117 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D L KII ++ +A I I G+ G + D +K+ +IG V + Q + Sbjct: 118 DNDILAKIIIMLDQAKVIDIYGVSGPLRIASDFQYKMFRIGKNVQIAPMVNEQLFQAAQS 177 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 K I ISYSG E++ AE +++ +IAITS +S L +L + L S E + Sbjct: 178 NKDHCAILISYSGETNEVIAAAELLKRRKVPMIAITSFGESRLSKLCDYVLFLDSRERIY 237 Query: 241 -RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 + S+ + + + + D+++ L + E+L++ + + Sbjct: 238 SKVSTFGSTISIHIMLDIIYSCLFARHYDENLELKLETDHIIDH 281 >UniRef50_C2D3P4 RpiR family transcriptional regulator (Fragment) n=3 Tax=Lactobacillus RepID=C2D3P4_LACBR Length = 281 Score = 242 bits (619), Expect = 8e-63, Method: Composition-based stats. Identities = 64/279 (22%), Positives = 117/279 (41%), Gaps = 6/279 (2%) Query: 7 ISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTEL 66 + + + +KIA ++ N + +A S +S+ + + LG F E Sbjct: 8 LKQSFDNLSRTNKKIAKYVIDNPQAASEANIEDLAAVTETSTASVSRLVKTLGYSNFREF 67 Query: 67 RMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQ 126 ++L + L + I ++D+L IA K+ + AL+ T +D Sbjct: 68 TLSLAYT------QLRPQNLPIFKDIDANDTLSTIADKIFTSSQRALQDTREGIDENEFA 121 Query: 127 KIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQ 186 + + I + GLGGS++ D K ++ D VQ + L + D Sbjct: 122 RSVLRIIHCRRLGFFGLGGSSVAALDGYHKFLRTSIDCFYYPDFDVQLMQAVKLGEDDCA 181 Query: 187 IAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMS 246 I +S+SG ++ + AE +++ VIAITS DSPL + T + S E+ +RS M Sbjct: 182 IVVSHSGKNRQTIKIAETLKRRKVPVIAITSYQDSPLVGHSDITFISSSDESNYRSEGMY 241 Query: 247 TRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + AQ ++ D LF+ + I+ + + + Sbjct: 242 SLLAQLTIIDTLFMMATVRMGPATEDTIRSVQNIIESTR 280 >UniRef50_C0D4M2 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D4M2_9CLOT Length = 282 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 68/283 (24%), Positives = 138/283 (48%), Gaps = 6/283 (2%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 + I + + +++ +AD++ N ++ + ++A +S++++++F KL Sbjct: 5 IFSLIRTKYNTLSSSQKDVADYILTNPDKVMMNTLNEIAAACRVSETTVLRFLHKLNYNS 64 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 + R+ L E S ++T ++ + D+ + I K+ ++ + ++D Sbjct: 65 YQLFRINLTQELSKDNQET------VYDDVGFQDTEDEIIDKIIHSTVSSITDSRQIIDP 118 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 A ++ ++E I+ A I + G+G S + +DL KL+K+G C D H+ ++ L + Sbjct: 119 ASVKAVVEKIAGARRIVVAGVGASGFIAQDLYHKLIKLGLNAVCANDPHIMNILATGLDQ 178 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 + I S+SG +E++ A A+++ V A+TS S L A + L + S ET +RS Sbjct: 179 NTILILFSHSGESREVLDMAAIAKERRCQVCAVTSYAKSTLANQAGYLLCSSSRETMFRS 238 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +M++R Q + D+L+V LV L I S + K Sbjct: 239 DAMTSRIVQMVIIDILYVSLVIALGDGILPQIHSSRLAVAKNK 281 >UniRef50_B5FDJ7 Transcriptional regulator, RpiR family protein n=48 Tax=Gammaproteobacteria RepID=B5FDJ7_VIBFM Length = 283 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 124/284 (43%), Positives = 185/284 (65%), Gaps = 1/284 (0%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L KI N S + N KI DF+ + + + S SS+ +A ++G+SQSSIVK Q+LG Sbjct: 1 MNILEKIQNQRSNLSSNGIKILDFILDDPASISSYSSQALAAKVGVSQSSIVKLTQRLGF 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GFT ++A+I + ++ +H+ I SDDS IA+KL +EK AL T + Sbjct: 61 KGFTAFKLAIIEDLGR-KQAILEPERPIHNKINSDDSSLTIAQKLVQEKTHALIATTNAI 119 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 +++ + + ++++A IQI G+GGSAL +DL+FKL+KIG E D+HVQ + L Sbjct: 120 NFSEFELVTTLLNQAQRIQIVGIGGSALTAKDLAFKLLKIGMTALTEQDSHVQIATANTL 179 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 K DVQI ISYSGS+KEI++ A+ A +GATVIA+TS SPLR+LA+F +DT++ E ++ Sbjct: 180 TKQDVQIVISYSGSRKEILMAAQTAMDKGATVIALTSTKKSPLRKLANFCIDTIADERQF 239 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 RSSS+S+RTAQN +TDLLF+ L+Q+ ++ +I S R+ Sbjct: 240 RSSSISSRTAQNVITDLLFMTLLQIKSDKAKLLIDEISSTMNRI 283 >UniRef50_C1I531 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I531_9CLOT Length = 284 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 75/273 (27%), Positives = 144/273 (52%), Gaps = 2/273 (0%) Query: 12 SEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALI 71 SE T+ E KI D+++ ++ ++ ++A G+ ++++ +F +KLG + F E +M + Sbjct: 10 SELTKAENKICDYIEEYMNSSIYMTVTEIANNCGVGEATVTRFCRKLGFRSFLEFKMTMA 69 Query: 72 GEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEV 131 E+ S + + ++ +DSL +K +LE+T +DY+ +++I ++ Sbjct: 70 QEFKNS--GYDNEDIIESEVVSENDSLGEFVKKFYEINVNSLEETLKKIDYSMIEEISDI 127 Query: 132 ISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISY 191 + KA I TG+G S ++ D +K MKIG C D+H ++ +K+GDV IS Sbjct: 128 LVKAKRISFTGVGHSGIIAEDAYYKFMKIGLICNCYRDSHTLVMMASLMKEGDVLFIISN 187 Query: 192 SGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQ 251 SG+ +EI + AE AR+ VI+IT S L R++ + L+ E + S R +Q Sbjct: 188 SGNTEEINIAAEIARENNVKVISITENLLSKLARVSDYVLNYTDQEIKIDMESFGIRISQ 247 Query: 252 NSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 N + DL+ +++ N ++ ++ + ++L Sbjct: 248 NFLIDLICTNVIRKNKEIAVVSKSKTEKAIEKL 280 >UniRef50_B9K581 Transcriptional repressor of rpiB expression; transcriptional repressor of ribose catabolism (RpiR/YebK family) n=3 Tax=Proteobacteria RepID=B9K581_AGRVS Length = 291 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 7/276 (2%) Query: 6 KISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTE 65 +I T E K+ D + + S +Q+A+ G+S++ +VK +KLG GF + Sbjct: 14 RIRMMMPMLTPLEAKVVDTVFGMRDFSEETSLKQIAENAGVSEAMVVKITKKLGFSGFRD 73 Query: 66 LRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARL 125 R S+ + +H ++ DD+ I +K+ R ALE+T A+LD A Sbjct: 74 FR-------SSVSQYNRQPTTEMHQELSVDDTSLEIVQKVFRTSIHALEETLAILDMAAF 126 Query: 126 QKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDV 185 + ++I KA G+GGSA + RD++ K ++IG R + D+H+ + L DV Sbjct: 127 DQAADMIHKARNRDFYGVGGSAQIARDVAHKFLRIGVRASVFDDSHMMLMSAALLADTDV 186 Query: 186 QIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSM 245 I S+SG+ ++ + ARK GA+ IA+T+ S L + A L + + + + Sbjct: 187 AIGFSHSGNTIAVIEALQLARKNGASTIAVTNYGSSALAQSADVVLCSTAQGSPLMGENA 246 Query: 246 STRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 + R AQ ++ D +FV + Q + + + + R+ Sbjct: 247 AARIAQLNILDAIFVAVAQRDYQAAERNLDRTMSAV 282 >UniRef50_C2D9G3 RpiR family transcriptional regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9G3_9ACTN Length = 285 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 85/282 (30%), Positives = 138/282 (48%), Gaps = 8/282 (2%) Query: 5 TKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFT 64 KI + E EQ IA F+ +V E ++ ++A +LG++ S+I KFAQK+G +GF Sbjct: 8 AKIKSLLPSCAEKEQAIAQFILQHVRETSYMTIHELADKLGVADSTIFKFAQKMGYKGFR 67 Query: 65 ELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYAR 124 + R L+ E + +H IT+ DSL IA + +L T ALL+ Sbjct: 68 DFRNDLLTE-------AYDPEVSVHEHITTRDSLATIAATIFHSSVTSLHNTLALLNEDN 120 Query: 125 LQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD 184 L++ + +I+ A + G GGS +V D K ++ D H+Q + L D Sbjct: 121 LKRALSLINNAHTLTFFGCGGSNIVAADAYHKFLRSPLHCQNAIDEHIQIMQASLLGAQD 180 Query: 185 VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSS 244 V I IS+SG + + AE R+ +I ITS ++P+ R A + S ET +RS S Sbjct: 181 VAIIISHSGLSRTTLQIAEILRENRVPIIFITSYLNTPITRFADVVFISASEETGYRSES 240 Query: 245 MSTRTAQNSVTDLLFVGLVQLNDVESLKM-IQRSSELTQRLK 285 +++R AQ + D LF ++ +D +++ + R K Sbjct: 241 LASRVAQLVILDTLFCAVMFKSDDKNVAQTLHNIRSAINRTK 282 >UniRef50_Q184N2 Putative phosphosugar-binding transcriptional regulator n=4 Tax=Clostridium difficile RepID=Q184N2_CLOD6 Length = 283 Score = 240 bits (614), Expect = 3e-62, Method: Composition-based stats. Identities = 80/284 (28%), Positives = 150/284 (52%), Gaps = 6/284 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M + K+ + TE ++KIAD++ N + +S ++A S +SIV+F++K+G Sbjct: 1 MSCILKLKQIYEDLTEVDKKIADYILNNTEAISKLSVSELASNSKTSTASIVRFSRKMGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF +L++ + + + + + D +++ + K+ + + QT L Sbjct: 61 SGFGDLKIEIAKDLMGKENE------YTYVDENYDCNIDSVINKITNKNIETINQTRLLN 114 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + +++ +E I KA + I G+GGSALV DL KL++I + D+H Q VS + Sbjct: 115 EKDIIKEAVEQIIKAKNVYIFGVGGSALVALDLQMKLLRINKQAFTSLDSHTQLMVSSNV 174 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 K D+ IAISYSG KE++ E A+ +G VI IT +D+ L +++ L + E Sbjct: 175 DKEDIAIAISYSGESKEVIKSIENAKLKGCKVICITKYSDNHLSKISDLKLVVPNIEKRL 234 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 R ++S+R A ++ D++++ ++Q N E+ + +Q + + L Sbjct: 235 REGAISSRIAMLTLIDIIYISIIQENLNEAEQKLQETKRILDYL 278 >UniRef50_Q1QSE2 Transcriptional regulator, RpiR family n=28 Tax=cellular organisms RepID=Q1QSE2_CHRSD Length = 289 Score = 240 bits (614), Expect = 3e-62, Method: Composition-based stats. Identities = 66/283 (23%), Positives = 120/283 (42%), Gaps = 8/283 (2%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 ++ F +EQK+A F+ + ++ + +A + +S+ ++V+F + LG G Sbjct: 5 LFDEMRRRMEHFRRSEQKVARFVLRHPEDVIHMRIVDLATEAKVSEPTVVRFCRALGCNG 64 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 F + ++ L + + S+ DS+ A + L LD+ Sbjct: 65 FQDFKLKLAQMLATGSQ-------FAQFSMNDSDSVAEFAHNIFDSTVGTLLSVRDRLDH 117 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 A L K + ++ A ++ G G S V D K ++ A D H+Q + L Sbjct: 118 AALGKAVTALAMANRVEFYGFGASGAVAFDAQHKFFRLQISTAAYTDPHMQNMSAVTLTP 177 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 DV +AIS +G + +V AR+ GATVI + +DSPL L E Sbjct: 178 RDVVVAISQTGRTRALVASVRLARETGATVIGLC-PSDSPLASEVTLPLYIDVHEDTEIY 236 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + MS+R A + D+L VG+ + + + ++ + L+ Sbjct: 237 TPMSSRVAHLVIIDVLAVGVAKTRGPKLAEQLKSVKKSLVPLR 279 >UniRef50_A8F3D9 Transcriptional regulator, RpiR family n=1 Tax=Thermotoga lettingae TMO RepID=A8F3D9_THELT Length = 276 Score = 240 bits (613), Expect = 5e-62, Method: Composition-based stats. Identities = 73/279 (26%), Positives = 129/279 (46%), Gaps = 16/279 (5%) Query: 7 ISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTEL 66 I +FT+ E ++A F+ + E+ +S ++ +L I Q ++V+F QKLG GF Sbjct: 9 IKANQKQFTKKENELAQFVIDHPDEVIHMSITEIVDELRIGQGTVVRFCQKLGFSGFHPF 68 Query: 67 RMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL--DYAR 124 ++AL E + + + + + + A+E+T LL + Sbjct: 69 KIALAKSLGRQEE--------------ASEGSKDMLAMVKEDHIKAIEETSKLLKLNEKV 114 Query: 125 LQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD 184 + + E IS + + G+G S + D +K M+IG V D H QA + D Sbjct: 115 VYQCAEKISNCRRLYLLGVGASGVTALDAYYKFMRIGVDVKYMLDPHFQAMSLSGCNEKD 174 Query: 185 VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSS 244 +A S SGS +V A+ A++ A VIA+T SPL A F L T E ++S + Sbjct: 175 CVVAFSQSGSTAVVVDMAQIAKQNKACVIAVTGYNKSPLTFYADFVLLTAVRENPFQSGA 234 Query: 245 MSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 + ++ AQ V ++LF L ++ + + R++ ++ Sbjct: 235 IRSKIAQLHVLEVLFEQTKLLLADKAKQNVDRTARSVEK 273 >UniRef50_A9BXM8 Transcriptional regulator, RpiR family n=16 Tax=cellular organisms RepID=A9BXM8_DELAS Length = 323 Score = 240 bits (612), Expect = 6e-62, Method: Composition-based stats. Identities = 67/285 (23%), Positives = 120/285 (42%), Gaps = 12/285 (4%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L L +I+ + EQ++A + A+ R++A++ +S+ ++V+F + +G Sbjct: 42 LMLDRITASLPSLAPAEQRVARLVLADPRAFARQPVRELAERAHVSKPTVVRFCRSMGYD 101 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G + ++ L G S +H S+ +DD + K+ A Q Sbjct: 102 GLADFKLKLAGSVSEG-------VPFIHRSVDTDDKTSDVMVKVVDNAVAAFLQYRNAAS 154 Query: 122 YARLQKIIEVISK----APFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVS 177 +++ + I+ I+ G G S +V +D K ++G +D H+Q + Sbjct: 155 TTAIEQAAQAIASTWQTGRRIEFYGAGNSGIVAQDAQHKFFRLGVTSLATSDGHMQVMSA 214 Query: 178 QALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGE 237 L GD + IS SG ++++ A+ ARK GAT IAIT+ SPL H L E Sbjct: 215 TLLGPGDCAVIISNSGRTRDLMDAADIARKNGATTIAITASG-SPLASACHIHLAADHPE 273 Query: 238 TEWRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 R S M +R V D+L + +++ + Sbjct: 274 GYDRYSPMVSRLLHLLVIDVLATCVALRIGPALQPALEQMKNNLR 318 >UniRef50_Q04DU1 Transcriptional regulator n=2 Tax=Oenococcus oeni RepID=Q04DU1_OENOB Length = 282 Score = 239 bits (611), Expect = 7e-62, Method: Composition-based stats. Identities = 66/281 (23%), Positives = 135/281 (48%), Gaps = 7/281 (2%) Query: 5 TKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFT 64 I + + E++IAD++ ++ + + + ++ ++GIS +SI +F + LG F Sbjct: 6 ETIRSYYEKLHPGEKRIADYILSHQDSVMDATIQSLSDKIGISTASISRFTRHLGYPNFR 65 Query: 65 ELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYAR 124 + +AL S + + I D E I +KL AL T A ++ Sbjct: 66 DFLIALSASKKNS-------SSDFFTEIKQSDQSEQIVKKLFSAGIAALTATAANINMKD 118 Query: 125 LQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD 184 L ++++ + + I G+GGS++V + K ++ + D +Q + L D Sbjct: 119 LDRVVDWLVSSNKIGFFGIGGSSIVAFNAYHKFLRTNLNIVSHPDYDIQIMQAAHLTSED 178 Query: 185 VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSS 244 + I IS+SG ++ +L R+ G+ ++AIT+ +SP+ + A L++ S E +R S Sbjct: 179 LGIVISHSGRNQDTLLVENKLRENGSKIVAITAFPESPIAKNADIVLNSYSEEVNFRQES 238 Query: 245 MSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 MS+ AQ ++ D LF + + ++ ++I + ++ + Sbjct: 239 MSSLVAQITIIDTLFTLVGHRLNEQTDQVINSMRRVIEQTR 279 >UniRef50_C4L7F8 Transcriptional regulator, RpiR family n=2 Tax=Gammaproteobacteria RepID=C4L7F8_TOLAT Length = 292 Score = 239 bits (611), Expect = 7e-62, Method: Composition-based stats. Identities = 78/280 (27%), Positives = 142/280 (50%), Gaps = 7/280 (2%) Query: 5 TKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFT 64 KI A + E++IA++L A + S + +A+QL +S+ IVK ++KLG GF Sbjct: 13 AKIRMALPGLSNTERQIAEWLLAKGNVESKTSIKSVAEQLEVSEPLIVKLSKKLGFAGFR 72 Query: 65 ELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYAR 124 ELR AL+ E ++ + I DS+E + K+ A+++ ++ D Sbjct: 73 ELRQALV-------EYLSSLPIDSEQEIEPTDSVESVLNKVFANSIQAMKEARSVADPIL 125 Query: 125 LQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD 184 + ++I A + I G+GGSA V +D KL++IG +D H+ VS L + D Sbjct: 126 IANAAQLIFNAKNVVIFGVGGSAAVCQDFEHKLLRIGILSRAYSDFHMMLMVSSQLDEND 185 Query: 185 VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSS 244 V + IS SG +E++ E A+++ + VI IT+ S L +LA + + + + + Sbjct: 186 VIVVISQSGDTRELLKAVENAKQRHSRVICITNNDTSALAQLADYAIFSPAKGGILLGQN 245 Query: 245 MSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 R Q ++ D+LF+ ++ + ++ + + R S + + L Sbjct: 246 AVARIVQLNLLDVLFIAILLQDHDKNREKLTRGSRVVRHL 285 >UniRef50_C2D9S0 RpiR family transcriptional regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9S0_9ACTN Length = 282 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 76/275 (27%), Positives = 124/275 (45%), Gaps = 5/275 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L + + +EQ+I ++ + V+ ++A+ +S ++I + +KL Sbjct: 5 SLLVLLKENKDRVSTSEQQIITYILKKPEAIVGVTIHELAQMTFVSAATISRLLRKLSLG 64 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ E + LI E ++ + ++ I DS + I K+ R+ ++ T L + Sbjct: 65 GYKEFQQYLIYELASMKTSRQSSI----EDINPKDSTKQIMFKIMRKTIESITLTEKLNN 120 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + E+I A I I G+G S L +DL +K ++ AD H+Q + + Sbjct: 121 PKTIDSCAELIHNARHITIFGMGSSLLSAQDLQYKFLRANIDCTLSADWHMQLIAANNMS 180 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSP-LRRLAHFTLDTVSGETEW 240 GDV IA SYSG E + C AA+ G VIAIT +S L R A L S E Sbjct: 181 DGDVAIAFSYSGVTPETLRCVHAAQDHGGKVIAITRSVNSTELVRHADIVLYVASTEPLL 240 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQ 275 RSS+ ++R Q + D LF LV + I+ Sbjct: 241 RSSAGTSRITQLMIVDTLFSTLVNKHYDVYATAIE 275 >UniRef50_Q3JNN8 Transcriptional regulator, RpiR family n=54 Tax=Burkholderiaceae RepID=Q3JNN8_BURP1 Length = 339 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 77/282 (27%), Positives = 134/282 (47%), Gaps = 8/282 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L +I ++ +E+K+ADF+ A E+ +S ++A + G SQ +I +F Q LG Sbjct: 7 TMLPRIETIRAQLRPSERKLADFVLAAPREVLDLSMTELAARAGASQPTIARFCQALGCS 66 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF E ++ L + ++ + D+ I K+ AL + L Sbjct: 67 GFREFKIRLAQSVA-------PGVASVYRDVEPDERAPGIIGKVFDRTIGALIEVRNSLS 119 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + + IE++++A I+ G GGS + +D+ K ++G +D H + + L Sbjct: 120 ATSVAEAIELLTRASRIEFYGAGGSGIAAQDIQHKFFRLGVPSVAYSDPHTFSMSAALLG 179 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV +AIS +G ++IV A AA GA VI+IT SPL +L+ +L + E Sbjct: 180 ANDVVVAISNTGRTRDIVDAARAALACGAKVISITHS-HSPLAQLSTVSLASNVAEETDV 238 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 S M++R + ++ D+L VG+ E + + R+ E R Sbjct: 239 FSPMTSRMSHLAIGDILAVGVALRRGPELVDRLGRAKEAITR 280 >UniRef50_Q38YX9 Gluconate operon transcriptional regulator, RpiR family n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38YX9_LACSS Length = 280 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 75/279 (26%), Positives = 136/279 (48%), Gaps = 8/279 (2%) Query: 7 ISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTEL 66 + + F+E ++IAD++ Q ++ ++ A G+S ++I +FA+ LG F Sbjct: 9 LRSYYDNFSEKYKQIADYIFQESQFNQRLTIQEFAANCGVSTATISRFAKILGFDNFQAF 68 Query: 67 RMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQ 126 +MAL+ + A L I ++D+ +A K+ AL+ T +LL +LQ Sbjct: 69 KMALLAK--------EANTSPLFHEINANDTFTTMAEKIFSSNSNALKATWSLLTEEQLQ 120 Query: 127 KIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQ 186 K + +I++A + + GLG S +V +D K ++ D H+Q + L D Sbjct: 121 KAVALINRAHLLSLFGLGASGIVAQDGYHKFLRTSIPTVFNQDYHLQLMQATKLTNQDCA 180 Query: 187 IAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMS 246 I IS+SG K+ + A +++ +I ITS +S L +L TL ++S ET +R+ ++ Sbjct: 181 IIISHSGQNKDALELARILKERQVPLIVITSFGNSSLAKLGDITLLSISEETNYRAEALH 240 Query: 247 TRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 AQ S+ D LF+ + N E+ + + R + Sbjct: 241 ALIAQISLIDSLFMMVAVNNGQETEQSFKEIRAEIDRTR 279 >UniRef50_D1AG49 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AG49_SEBTE Length = 283 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 70/285 (24%), Positives = 144/285 (50%), Gaps = 3/285 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M + K+ A + FT NE A ++ ++ E+ +S ++AK+ S ++I++ +K+G Sbjct: 1 MSLIIKLREAKN-FTPNEIGAAKYIISHSDEVIRLSCTELAKKTYTSPATIIRLCKKIGI 59 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 G+ E ++ L E + + N+ ++ ++ I DS+ I K++ +L++T L Sbjct: 60 GGYQEFKVILATEINFFIK--NSMEINKNNEIDKKDSISDIIDKISSLSIDSLKETKILT 117 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D ++ +I++I+ A + + G G S V D ++K M+IG A A Q ++ Sbjct: 118 DKNVVKSVIDMINNAEILDLYGSGASHFVALDANYKFMRIGKVTATYALYDQQYVQAKNS 177 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + I SYSG E++ A+ + A +I IT +D+ L + A +L + E + Sbjct: 178 NENHAAIIFSYSGETAEMIEIAKILTENKAKIITITKNSDNTLEKFADKSLYVTAKENLY 237 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 RS+++ +R + +V D+L+ L ++L+ + ++ +K Sbjct: 238 RSAAIYSRISMLNVIDILYTAYFNLIYEKALEALGKTRISKTEVK 282 >UniRef50_P46118 HTH-type transcriptional regulator hexR n=302 Tax=Gammaproteobacteria RepID=HEXR_ECOLI Length = 289 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 69/283 (24%), Positives = 126/283 (44%), Gaps = 8/283 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L KI + +++E+K+A+ + A+ S MA + +S+ ++ +F + + Sbjct: 1 MNMLEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAAMALEANVSEPTVNRFCRSMDT 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF + ++ L + +++ ++ DDS+E K+ L+ L Sbjct: 61 RGFPDFKLHLAQSLANG-------TPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSL 113 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D + + + ++++++A I GLG SA V D K + V D +Q Sbjct: 114 DKSAINRAVDLLTQAKKIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNC 173 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 GDV + IS++G K +V A+ AR+ A VIA+TS +PL R A + E Sbjct: 174 SDGDVVVLISHTGRTKNLVELAQLARENDAMVIALTS-AGTPLAREATLAITLDVPEDTD 232 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 M +R AQ +V D+L G + ++R E + Sbjct: 233 IYMPMVSRLAQLTVIDVLATGFTLRRGAKFRDNLKRVKEALKE 275 >UniRef50_C1XRD4 Transcriptional regulator n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XRD4_9DEIN Length = 264 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 66/268 (24%), Positives = 121/268 (45%), Gaps = 9/268 (3%) Query: 14 FTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGE 73 T ++IA ++ N ++ + ++A G S++S+V+F + LG QGF + ++AL + Sbjct: 1 MTPALERIAQYVLHNADQVIYQTVIEVADAAGSSEASVVRFCRDLGFQGFQDFKLALASD 60 Query: 74 YSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVIS 133 T+ + S + A + L++T L++ L++++E I Sbjct: 61 L--------VTSPVILPKQEKPTSAQSTADYVYNTARQVLDETRRLMNVDLLEEVVERIL 112 Query: 134 KAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSG 193 KA I G+G + +D + KL ++G D H A + L D+ IS SG Sbjct: 113 KARRIDFYGVGNAGTTAQDFAQKLQRLGCAAIAYPDPHSAAVSAATLGPKDLAFGISVSG 172 Query: 194 SKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNS 253 S + V E A+ GA +A+T SP+ R A L T + E+ SM + +Q Sbjct: 173 SSIDTVKALEQAKLAGAYTVAVTRGARSPITRFADAVLLTSAPESPLTRGSMGAKISQLM 232 Query: 254 VTDLLFVGLVQLNDVESLKMIQRSSELT 281 + D LF L + +++ +++ Sbjct: 233 LLDFLFTRTA-LRHPKGAELLSKTAAAV 259 >UniRef50_C3JIB3 RpiR-family transcriptional regulator n=2 Tax=Rhodococcus erythropolis RepID=C3JIB3_RHOER Length = 291 Score = 236 bits (604), Expect = 4e-61, Method: Composition-based stats. Identities = 79/279 (28%), Positives = 141/279 (50%), Gaps = 5/279 (1%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 L +I + S + E +IA+ ++A+ S +++ +A++ S +++V+ A++LG +G Sbjct: 13 LLARIRASLSSLSPAELRIAEIIEADPSLASTLTVNDLAERASTSTATVVRTAKRLGFEG 72 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 + +LR+AL + E T + L I + DS + KL + L+ T L D Sbjct: 73 YPQLRLALAAISGSGTENT----IPLGVDIVAADSAGEVMAKLAEFESEQLKGTAQLTDP 128 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 A L++++ I A +++ G+G S +V +DL+ KL +I D + L Sbjct: 129 AALEEVVSRIRSARRVEVYGIGASGIVAQDLTLKLSRIDVNCRVHLDRDAAMVSASLLGP 188 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 D+ + IS+SG ++V AR+ GA+ AIT S L +H L T E +RS Sbjct: 189 DDIAVGISHSGETSDVVEPLALARRTGASTAAITGGARSTLAVQSHHVLLTAGREFGFRS 248 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 ++M++RT Q V D +F +V + +L +QRS + Sbjct: 249 AAMASRTGQLLVVDTIF-AMVAHSLPSALSALQRSHDAI 286 >UniRef50_B7RYI4 Transcriptional regulator, RpiR family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RYI4_9GAMM Length = 278 Score = 236 bits (604), Expect = 4e-61, Method: Composition-based stats. Identities = 79/285 (27%), Positives = 130/285 (45%), Gaps = 8/285 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M LT +++ S+ +++ KIA + AN + + ++ +A Q G+S+ ++ +F LG Sbjct: 1 MTLLTDLADPLSKRSKSAHKIAACVVANPEAILASTTASLAAQAGVSEPTVNRFCTGLGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF + +++L E + + + I DDS +A K+ + +L T L Sbjct: 61 KGFPDFKLSLAAELARKQPRMT-------RDIDPDDSAAKVAAKIFESTQASLSNTQDHL 113 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D A LQ ++ +S A I + GLG SA V D KL++ + D Q V+ L Sbjct: 114 DLAALQDVVAAMSNARSIALCGLGASASVALDAQHKLLRFPIPIMAHTDIINQRVVAAGL 173 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 D+ I ISY+G ++ AE A +G V ITS SPL L SGE Sbjct: 174 GADDLLICISYTGRTTAMIELAELAVSRGCQVAGITS-PHSPLANTCPLVLGVESGEDTD 232 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 R + M++R AQ + D+L L +Q + + Sbjct: 233 RYTPMTSRIAQLVIIDILATCLALEQGEAFADHLQEVKRNLSQTR 277 >UniRef50_C8NHI8 Probable transcriptional regulator YbbH n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHI8_9LACT Length = 281 Score = 236 bits (604), Expect = 5e-61, Method: Composition-based stats. Identities = 75/284 (26%), Positives = 143/284 (50%), Gaps = 6/284 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L KI ++ S FTE ++ IA+F+ N + +++++ S ++ V+F++K+G Sbjct: 1 MSVLYKIKSSMSAFTETDRSIAEFVFVNRQVVLESNAKELGDMTKTSAAAWVRFSKKMGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +G ++AL E + + + + + + DSL + +K + +T +LL Sbjct: 61 KGLPAFKVALAKETQSYTNEDD-----IETFLNPQDSLMGLLQKTENMLTQNIRETFSLL 115 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 DY L+K IE I +A + + G+GGS++V D K+ +I V + D H L Sbjct: 116 DYHALEKAIEFIHEAKTVFLLGVGGSSIVCLDFYHKMTRIHQNVMYDRDLHTLMPRIAQL 175 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLT-DSPLRRLAHFTLDTVSGETE 239 K DV + ISY+G + + A+ A+ GA ++ +T S L L+ L E E Sbjct: 176 DKNDVVLVISYNGETESVNSIAKVAKTMGARIVGVTKYNLKSTLSTLSDIRLFVPVEEKE 235 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 R S+++R + ++TDLL+ G+ + + + ++ R+ + + Sbjct: 236 IRLGSITSRNSLLTITDLLYYGIAKTDFNVTKDLLVRTRQFIKE 279 >UniRef50_C5C1Y9 Transcriptional regulator, RpiR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C1Y9_BEUC1 Length = 307 Score = 236 bits (604), Expect = 5e-61, Method: Composition-based stats. Identities = 72/281 (25%), Positives = 143/281 (50%), Gaps = 2/281 (0%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 L ++ + ++ ++ A+ + A+ + + +A+ G S S++ + ++LG G Sbjct: 17 ILAELRRLLPDLPDSVRRTAERVLADPVASVAGTITDLAEASGTSPSAVSRLCRRLGVDG 76 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 + LR+A++ + +AS ++ + + +I DSLE +A L A+ T A LD Sbjct: 77 YPALRIAVVADATASA--SSPWEIDISRTIGPTDSLEDVAGTLGAATSRAVHDTLAGLDL 134 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 L+ + ++ A + + G+ GSA++ +L +L +IG AD H T + L Sbjct: 135 DVLRDVAHAVAGARRVHLYGVSGSAVMTAELQLRLHRIGIATWSFADVHEGLTGAALLGP 194 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 GDV IA+SY+G E + AA + A +A+T S L +A L TV+ ET +R Sbjct: 195 GDVAIAVSYTGETIETLEMLRAAGSRDALTVAVTGAPRSSLAAVADRILVTVTEETTFRE 254 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 ++ R ++ +V +LL++ + QL + +++ +++ +R Sbjct: 255 GPLAARFSELTVVELLYLAVGQLTYERTTELLTQTALAVRR 295 >UniRef50_C9L6X6 Transcriptional regulator, RpiR family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L6X6_RUMHA Length = 297 Score = 236 bits (603), Expect = 6e-61, Method: Composition-based stats. Identities = 83/270 (30%), Positives = 138/270 (51%), Gaps = 7/270 (2%) Query: 16 ENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYS 75 + E+KIA +L N + + ++A ++G+S +SIV+F + +G GF E ++ Sbjct: 34 KTERKIAAYLLGNFDKSLHSTLLELADEIGVSDASIVRFCKSIGYTGFQEYKIN------ 87 Query: 76 ASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKA 135 + ++ + S++ DD+ I K+ + ALEQT LD + + K+ +V+ KA Sbjct: 88 -AALQSVPEPRLYNPSLSVDDNPAEICDKIFAIESSALEQTKQELDISVMNKVADVLLKA 146 Query: 136 PFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSK 195 I + G GGSA+ RD KL+KIG R + D +Q + L + DV AIS+SGS Sbjct: 147 RRINLVGTGGSAISARDFQHKLLKIGVRAELQEDKDLQLMSASLLTEEDVLFAISHSGSN 206 Query: 196 KEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVT 255 + E A+K+ A +I +T + + L A + L VS +T + S S S R AQ ++ Sbjct: 207 LHVAETIELAQKRNAKIITLTMKSKNILVEKADYPLYVVSEKTIFESESFSARLAQLAML 266 Query: 256 DLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 D L + N SL+ ++ + T K Sbjct: 267 DCLVALMAFKNFDGSLEAMKATRIATSVNK 296 >UniRef50_B9CM70 Transcriptional regulator, RpiR family n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CM70_9ACTN Length = 283 Score = 236 bits (602), Expect = 9e-61, Method: Composition-based stats. Identities = 74/280 (26%), Positives = 140/280 (50%), Gaps = 7/280 (2%) Query: 6 KISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTE 65 ++ S ++ E+++A+FL A+ + ++ Q+A+ LG++ S++ KF QKLG +GF + Sbjct: 9 RVRALESSLSDKERQLAEFLLADPHKASKMTISQIAQTLGMADSTVFKFTQKLGFEGFRD 68 Query: 66 LRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARL 125 R L E + +H IT + + +A + +L T L + Sbjct: 69 FRGELAAE-------GFDPEVSIHEHITHKSTPKQMAETVFESSIRSLTDTKELFSEQDI 121 Query: 126 QKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDV 185 ++I + G+GGS++V D K ++ RVA +AD H+Q + D Sbjct: 122 IHAAKLIEDCYQLTFYGMGGSSVVAADAYHKFLRTPKRVAYDADFHLQLMRASRSNGDDC 181 Query: 186 QIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSM 245 + +S+SG + + AE R+ GA+ I ITS SPL LA L T++ ET +RS S+ Sbjct: 182 ALLVSHSGRCIQTIQIAEKLREVGASTIVITSNPSSPLTALADACLVTIAEETAYRSESL 241 Query: 246 STRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 ++R +Q ++ D L+ ++ ++ + + ++ E+ + Sbjct: 242 ASRISQLALVDALYTIVMFSDENAASRSLKEVREVISATR 281 >UniRef50_P37767 Uncharacterized HTH-type transcriptional regulator yfhH n=149 Tax=Enterobacteriaceae RepID=YFHH_ECOLI Length = 282 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 95/284 (33%), Positives = 162/284 (57%), Gaps = 3/284 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L +I ++++K+AD+L + +SS+Q+A + G+SQSS+VKFAQKLG Sbjct: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF L++AL ++ + + ++ +H+ I DD L ++ KL +E A+ T + Sbjct: 61 KGFPALKLALSEALAS---QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 +L + + ++ A I +TG+G S LV ++ ++KLMKIG+ A D H QA Sbjct: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 D+ +AISY+G ++E+ L A+ + G V+AIT T + L++ A L T++ E Sbjct: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 S+S+S AQ +TDLLF+ L+Q + + + I+ S L ++L Sbjct: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 >UniRef50_C7REF2 Transcriptional regulator, RpiR family n=2 Tax=Anaerococcus RepID=C7REF2_ANAPD Length = 279 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 87/285 (30%), Positives = 149/285 (52%), Gaps = 6/285 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M Y KI +FT ++ KIA ++ E+ ++S+++A G SQS+I++F QK+G Sbjct: 1 MTYTIKIKERSEDFTPSDTKIAKYILDKPGEVIKINSQKLADLTGTSQSAIIRFVQKIGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +G+T L++ + N I++DD + I K ++E+T AL+ Sbjct: 61 KGYTSLKLDIAKSL------ENDEINLKSEVISADDKVGDIIEKSKINVISSIEKTYALI 114 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D ++ K I+ I A F+ + G+G S LV D +KL + G + E D H ++ + Sbjct: 115 DEDQISKAIDNIVYANFVYLAGIGSSGLVCEDFLYKLQRSGKKAFYETDAHTNLSLLTNI 174 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 K+ D+ I I+Y+ KE+++ AE A+ GA +I+IT L ++ + E + Sbjct: 175 KEDDLLICITYTALSKEVLIAAEYAKTIGAKLISITKAGRGKLANMSDILIPIPEIEKKM 234 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 R ++S+R A +TD+LF G + N E +K + S ELT +LK Sbjct: 235 RYGAISSRFASQIITDILFYGYISKNMDEVVKNLMVSKELTDKLK 279 >UniRef50_P26833 Uncharacterized HTH-type transcriptional regulator CPE0189 n=15 Tax=Clostridiales RepID=Y189_CLOPE Length = 279 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 75/281 (26%), Positives = 153/281 (54%), Gaps = 5/281 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L ++ N + T++E+ + +++++++ + S +AK+ G+ +++I +F +KLG Sbjct: 1 MGILEQLENPKFKATKSEKTLIEYIKSDLDNIIYKSISIIAKESGVGEATITRFTKKLGF 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF + ++ L E S K N + ++LH + D+S+ A K+ + LEQT + Sbjct: 61 NGFQDFKVTLAKEIS---NKKNTSIINLH--VHRDESVTETANKMLKSSINILEQTVKQI 115 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D + K ++I A + G+G S + D+++K M+IG+ D+H +S Sbjct: 116 DLDLMCKCRDLIMNAKRVYFIGIGYSGIAATDINYKFMRIGFTTVPVTDSHTMVIMSSIT 175 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 DV +AIS SG+ KE++ + A++ G +I +T +D+PLR+L+ + L S ET + Sbjct: 176 NDDDVIVAISNSGTTKEVIKTVKQAKENGTKIITLTEDSDNPLRKLSDYELTYTSAETIF 235 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 + S+S++ Q + DLL+ +++ E+++ +++ Sbjct: 236 ETGSISSKIPQIFLLDLLYTEVIKEMFSEAVEKKIKTTSAI 276 >UniRef50_C2JLW7 Bifunctional RpiR family transcriptional regulator/sugar isomerase n=22 Tax=Enterococcus faecalis RepID=C2JLW7_ENTFA Length = 290 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 80/280 (28%), Positives = 149/280 (53%), Gaps = 8/280 (2%) Query: 7 ISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTEL 66 I + + ++E+KIA+++ N + S++++++AKQ G S ++I++F + GFTEL Sbjct: 17 IQDRLQQLPKSERKIAEYILKNTETVISMNAQELAKQAGSSPAAIIRFCHSMDVNGFTEL 76 Query: 67 RMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQ 126 ++ L +++ +++ +T +S I +KL +E++ L+ + Sbjct: 77 KLLLSANLGQMKQQ-------MYTEVTKGESTADIKQKLQARFVHVVERSGQTLEDVAVN 129 Query: 127 KIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQ 186 + ++++ K I + GLG S+LV +D+ K ++G V D H+ A++ + +K V Sbjct: 130 EAVDLLEKTEVIFVYGLGASSLVAQDIYQKFTRLGRTVFTTLDHHLFASMLGSTEKPSVF 189 Query: 187 IAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGET-EWRSSSM 245 I IS SG+ KE A+ A++QG +++IT S + + L T SGE RS++ Sbjct: 190 IVISNSGTNKEASTLADLAKQQGIPIVSITQDEKSVIGEKSDIVLQTSSGEDVPLRSAAT 249 Query: 246 STRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + AQ V D+LF N E+L+ IQ S + +RLK Sbjct: 250 VSLVAQLYVVDVLFFAYAAKNYKETLEKIQISRKNVERLK 289 >UniRef50_Q02VU4 Transcriptional regulator n=4 Tax=Lactococcus lactis RepID=Q02VU4_LACLS Length = 282 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 66/281 (23%), Positives = 130/281 (46%), Gaps = 7/281 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 +++I + ++++Q I+D+L AN+ +S ++ A++ +S ++I +F++K+G Sbjct: 4 TLISRIRSYYDNLSKSDQAISDYLIANIDSAAMLSIQEFAQKTQVSTATISRFSKKIGFN 63 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 F EL++A+ S ++ S ++ D + I K +L T L+ Sbjct: 64 SFQELKLAIHATDSTRDDE-------FFSELSPTDDYKEILTKNFNGNISSLNSTLNLIS 116 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 +L + +E++ KA GLGGS V K +++ D H Q + L Sbjct: 117 NRQLDQTMEILLKANTCGFFGLGGSNAVALIAFHKFLRMPLHCVYHQDFHFQQMQAAKLT 176 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 D IS++G K+ + E + +G +IA+TS SPL + A L ++S E +R Sbjct: 177 SEDCAFVISHTGKNKDTMHLVEILKSRGVPIIALTSFASSPLAKAADVALISISEEISFR 236 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 ++++ +Q S+ D LF+ S + ++ Sbjct: 237 PEAVASTVSQISLLDALFMMYGMKMKDVSEGTLSEIRKVIS 277 >UniRef50_C5BVH6 Transcriptional regulator, RpiR family n=2 Tax=Actinomycetales RepID=C5BVH6_BEUC1 Length = 299 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 80/283 (28%), Positives = 141/283 (49%), Gaps = 2/283 (0%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 LT++ +E++IA+ + + + + Q+A + G S++S+ +F + +G G Sbjct: 16 VLTRLPGLLPTLRSSERRIAEAILDDPQAVSRDTIEQLAARCGTSKTSVTRFCRTIGLAG 75 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 +TELR+AL G+ R++ + L SS + +V+ +L AL +T LD Sbjct: 76 YTELRLALAGDVGRRRDE--SWRAELGSSADPQNPADVVVDELLTANVRALTETVRTLDR 133 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 A L ++ ++ A I + G+GGS V DL + +IG +++H T + L Sbjct: 134 AALAASVDALASAGRIDLYGIGGSGTVAADLQRRFHRIGRVAHAWSESHDALTGAAMLGA 193 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 DV IA+S++G E+ AR +GAT IA+T+ S + A L T + E R+ Sbjct: 194 SDVAIALSHTGETSEVAAALALARDRGATTIAVTNYPGSAVAAAADLVLVTAAHEERARA 253 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 ++ R AQ V D L+V + + ES ++R+SE + + Sbjct: 254 DGLAGRHAQMFVVDCLYVLVAGVLHDESQSGLRRTSEAVRSTR 296 >UniRef50_Q2JBJ8 Transcriptional regulator, RpiR family n=1 Tax=Frankia sp. CcI3 RepID=Q2JBJ8_FRASC Length = 299 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 81/277 (29%), Positives = 135/277 (48%), Gaps = 7/277 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 + + T + +KI + + E+ ++ +A + G S +++V+F Q LG +GF Sbjct: 24 IAHLRACLPTLTPSGRKIGQLILDDPREIVHLTVTDLADRTGTSVATVVRFCQDLGLKGF 83 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 +L++ L GE LH ++T DS I K+ E AL +T +D A Sbjct: 84 ADLKIRLAGEAI-------PPERGLHEAVTHADSPATILEKILHSTESALSETTRTVDRA 136 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 + ++ + A + + G G SA + +D +++ +G AD HVQ ++ L Sbjct: 137 AFTRAVDALQCADRVLLIGAGTSAPLAQDAAYRFRTLGLLAEAPADAHVQHVAARLLPPA 196 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 +AIS++G +E + A AAR GAT IA+TS SPL RLA L S ET +R Sbjct: 197 SACLAISHTGQTRETLAGAAAARAAGATTIALTSFFRSPLTRLADVALVAGSSETNYRVE 256 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSEL 280 +MS+R +V D LFV + + K + ++E+ Sbjct: 257 AMSSRIIHATVLDALFVAVHLAQPDRAQKAQELTAEV 293 >UniRef50_A0JVW9 Transcriptional regulator, RpiR family n=2 Tax=Actinomycetales RepID=A0JVW9_ARTS2 Length = 309 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 61/282 (21%), Positives = 134/282 (47%), Gaps = 5/282 (1%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 L +IS + +++A+ + + + Q+++ ++A G+ +S++ +F ++LG G Sbjct: 10 LLHRISGRLPYLPPSLRQVAEAVLKSPEQAQTMTISELAVAAGVGESTVSRFVKELGIDG 69 Query: 63 FTELRMALIGEYSASREKTNATALH---LHSSITSDDSLEVIARKLNREKELALEQTCAL 119 + + + L S+ T+A ++ + D+ IA K+ R +L +T Sbjct: 70 YKSMLLGLAEATFISKAATSARTADSEVVYEGVNRGDTAAEIAGKVERSSVQSLRRTGQR 129 Query: 120 LDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQA 179 D +Q+ +++I + + + +G S++ + + + G + DT +Q ++ Sbjct: 130 QDVEAIQRAVDLIDASNTVIFSCMGSSSIAAEEAVMRFTRAGKKCMLYRDTTIQVMLAAI 189 Query: 180 LKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVS--GE 237 ++ GD+ I IS SG I+ AR++GA IAIT SPLR A L T + Sbjct: 190 IEPGDLLIGISDSGRSTPIIDAMHLARQRGAATIAITGAEGSPLRNYADVVLYTATVPSG 249 Query: 238 TEWRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSE 279 E S++++ Q V D+L+ + +++ ++++ + Sbjct: 250 GELYGESVTSKWGQLLVIDILYATYASRHYDATVEHLKQTYQ 291 >UniRef50_B5GNW3 RpiR-family transcriptional regulator n=14 Tax=Streptomyces RepID=B5GNW3_STRCL Length = 354 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 84/280 (30%), Positives = 147/280 (52%), Gaps = 4/280 (1%) Query: 5 TKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFT 64 +K+ T + Q++A+ + + + +++ +A++ G S++++V+ A+ LG G+ Sbjct: 70 SKVRTLVPSMTRSMQRVAEAVADDPAGCAALTVTGLAERTGTSEATVVRTARLLGYPGYR 129 Query: 65 ELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYAR 124 + + + + + + + + I+ DD L + KL R+++ L T A LD A Sbjct: 130 D---LRLALAGLAAHQQSGRSPSVTADISVDDPLPDVVAKLARDEQQTLADTAATLDTAA 186 Query: 125 LQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD 184 L + + A I I G+G S+LVG DL+ KL++IG D H+ T + L+ GD Sbjct: 187 LAAAVSAAATARRIDIYGVGASSLVGLDLAQKLLRIGLIAHAHTDPHLAVTNAVQLRTGD 246 Query: 185 VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTV-SGETEWRSS 243 V +AI++SGS +++ AA ++GAT IAIT D P+ + A L T S E+E R + Sbjct: 247 VAVAITHSGSTGDVIEPLRAAFERGATTIAITGRADGPVTQYADHVLTTSTSRESELRPA 306 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 +MS+RT Q V D LF+G+ Q + + S E Sbjct: 307 AMSSRTGQLLVVDCLFIGVAQRTYASAAPALAASYEALAH 346 >UniRef50_B1QW74 Transcriptional regulator n=2 Tax=Clostridium butyricum RepID=B1QW74_CLOBU Length = 281 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 83/279 (29%), Positives = 148/279 (53%), Gaps = 6/279 (2%) Query: 7 ISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTEL 66 I + TE+E+KIAD++ N SE+ S+ ++A S SS+V+F++KLG +GF E Sbjct: 7 IKQIYDKMTESEKKIADYVLVNSSEVYKFSASELANITKTSSSSVVRFSRKLGFEGFQEF 66 Query: 67 RMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQ 126 ++ L ++ N + I ++D++ + K + ++ T +LLD ++ Sbjct: 67 KIELA------KDDINPVENIEYDYIDTEDNIREVIVKTANKNIQSINDTISLLDEHTIE 120 Query: 127 KIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQ 186 + I+ I A I I G+G SAL+G DL +KL++I ++HVQ ++S + D+ Sbjct: 121 EAIKAIKNAKNIYIFGIGESALIGLDLQYKLLRIHKNAMISLESHVQLSMSANISNDDIA 180 Query: 187 IAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMS 246 I ISY G KE+ +++GA I IT ++P+ L + E + R ++S Sbjct: 181 IGISYLGKTKEVYSALSKCKEKGAKCITITKFGENPVSSLGDIKIQVPFVEKDLRIGAIS 240 Query: 247 TRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +R Q +V D+LFVGL + N + K ++ + + + L+ Sbjct: 241 SRIVQLTVIDILFVGLAKENFSDVEKYLKETRNMIEELR 279 >UniRef50_Q9WYG1 Uncharacterized HTH-type transcriptional regulator TM_0326 n=7 Tax=Thermotogaceae RepID=Y326_THEMA Length = 280 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 72/286 (25%), Positives = 134/286 (46%), Gaps = 8/286 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGI-SQSSIVKFAQKLG 59 M + +I EFT E+KIAD + ++ + S ++++ G+ S++S+VKF +KLG Sbjct: 1 MDVIQRIKEKYDEFTNAEKKIADTILSDPKGIIESSISDLSEKAGVKSEASVVKFYKKLG 60 Query: 60 AQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCAL 119 F + ++ L S A ++ ++S+D + I K+ + A+ T Sbjct: 61 LNSFQQFKVLLAQSISR------APLEIVYEDVSSEDDTKTITEKIFKATVRAILDTLNW 114 Query: 120 LDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQA 179 LD +++ +++ A I G SA V D K +IG D H+ A + Sbjct: 115 LDIDSIERTVDLFKNAQRIIFIGFAASAAVAFDAFHKFTRIGKNCLFSNDEHIIAAILAT 174 Query: 180 LKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETE 239 D+ +AIS++G +V A+ A++ V+ IT S L + + L T + ET+ Sbjct: 175 ASPSDLLVAISHTGETISVVNFAKKAKEMKMPVVTITGNRKSTLAKYSDVVLATNTKETK 234 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 R+ +M++R Q + D ++ L D +++ + +S LK Sbjct: 235 IRTDAMTSRIVQLVILDTIYTLLAAR-DPRAIENLNKSRLAVSELK 279 >UniRef50_B8KWX3 Bifunctional protein glk n=3 Tax=unclassified Gammaproteobacteria RepID=B8KWX3_9GAMM Length = 337 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 68/286 (23%), Positives = 127/286 (44%), Gaps = 10/286 (3%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L I+ + ++E K+A + ++ +S +A + G+S+ S+ +F ++ GA Sbjct: 52 NLLEDINQSLPGLNKSEVKVAQAILSDPDAATRMSIASLASRAGVSEPSVNRFCKRFGAS 111 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF + ++ L + ++ ++ D ++ KL AL L Sbjct: 112 GFPDFKLRLATSMVSG-------VRYISRAVEFSDDIDTYPGKLFDNAISALVAAKEQLP 164 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + + ++ +++A I GLG SA V +D K + V D +Q ++ A Sbjct: 165 TGDIARAVDFLAQARRIHFFGLGTSAAVTKDAEHKFFRFNVPVTNHQDPLMQRMLAAAGS 224 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 GDV IS++G + +V AE AR+ ATV+++T+ SPL + + + GE Sbjct: 225 VGDVFFIISHTGRTRALVEVAELARQTEATVVSLTA-PQSPLAQESDCAITLTIGENTEE 283 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ--RLK 285 M++R Q +V D+L G+ L + R + + RLK Sbjct: 284 YLPMTSRLVQLAVIDVLATGVTLRRGERFLPHLARIKDSLKATRLK 329 >UniRef50_C6VNS3 Transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VNS3_LACPJ Length = 292 Score = 233 bits (596), Expect = 4e-60, Method: Composition-based stats. Identities = 66/283 (23%), Positives = 130/283 (45%), Gaps = 5/283 (1%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 LT I + + ++KIAD++ A+ + + S +A +G+S +++ +F +++ Sbjct: 12 VLTLIRSYYPNLSVTDRKIADYIIADPIKTAAQSISDLAAAVGVSTATVSRFVKRISFSS 71 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 F + L + E T + + + IA +L+QT ++ Sbjct: 72 FRDFSREL-----TAAEPIEQTNAEAFQDVEKQTTFKGIAESTFNSIRSSLDQTSQVMTE 126 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 A L++ +E++ A I GLGGSA+ D K ++ G A +D +Q + + Sbjct: 127 ADLKRAVELLLNARSIGFYGLGGSAVAALDGYHKFVRTGIPCAHNSDYDMQLMQAAQMNA 186 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 DV + IS++G ++ + Q VIA+TS +SPL + + +V+ E +RS Sbjct: 187 SDVAVVISHTGRNQQTLQVLATLTSQSVPVIALTSFGNSPLAKDSTVAFISVAEEINYRS 246 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +++ AQ S+ D LF+ ++E + + R E + + Sbjct: 247 EGLTSLIAQMSIIDSLFLMTAVHGNIEMAESLGRVREAISQTR 289 >UniRef50_A6UCC0 Transcriptional regulator, RpiR family n=4 Tax=Proteobacteria RepID=A6UCC0_SINMW Length = 296 Score = 233 bits (596), Expect = 5e-60, Method: Composition-based stats. Identities = 69/284 (24%), Positives = 124/284 (43%), Gaps = 8/284 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L I ++ ++++K+A+ + A+ + + + + A+ G+SQ ++++F +G Q Sbjct: 16 NILEVIRLRRADLRKSDRKVAELVLADPKRVINATIAEAAEWAGVSQPTVIRFCASIGCQ 75 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ + ++ L + T HS I + D+ ++ K+ +L+ LD Sbjct: 76 GYQDFKLRLAQSLALGMSAT-------HSVIDASDTPAQVSAKIFDYTITSLDWVRNHLD 128 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 ++ + I+ +SKA I+ G G S +V RD K G E D H Q V LK Sbjct: 129 PVQVSRAIDALSKASRIEFFGFGASGIVARDAQQKFPLFGVPCGAETDAHQQIMVVSMLK 188 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 GDV + IS +G+ I+ A AR+ G VI I D PL L + E Sbjct: 189 PGDVAVVISNTGATLAIIETARRARESGCQVIGIVGS-DGPLVEFCDIVLMVETLENTNI 247 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + +R A +V D+L + E + + + L+ Sbjct: 248 YTPTISRIAALTVIDILSTSVALRRGAEHVDLFTGMKRNLRYLR 291 >UniRef50_A5EB66 Transcriptional regulator, RpiR family n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EB66_BRASB Length = 270 Score = 233 bits (595), Expect = 6e-60, Method: Composition-based stats. Identities = 72/274 (26%), Positives = 127/274 (46%), Gaps = 7/274 (2%) Query: 10 AGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMA 69 E ++IA+ + A S ++A+ +S+ +IV F +++G +GF EL++ Sbjct: 1 MLPELPPKARQIAELIAAQPEPFVHKSITEVAEACDVSEGTIVSFCRRVGVRGFQELKIM 60 Query: 70 LIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKII 129 L + + + D + + +L++T LL L + Sbjct: 61 LARDLI-------EPVRLIQEDLHRGDDPATVTDHIFAAHAASLQETRRLLSMEALAEAT 113 Query: 130 EVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAI 189 ++ +A I+I G+G SA + +DLS++L+++G D+HVQA + G + + Sbjct: 114 RLLREAQRIEIYGIGSSAPIAQDLSYRLLQLGLAANAIVDSHVQAVSAGMTGPGVATVTV 173 Query: 190 SYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRT 249 S+SGS E VL A+ GA I IT L SPL L TV+ ET +R +MS+R Sbjct: 174 SHSGSTVETVLATRLAQAAGARTIGITRLGKSPLAAHCEVLLYTVANETRYRPEAMSSRV 233 Query: 250 AQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 AQ ++ D L + S+ +Q ++ + Sbjct: 234 AQLAIIDTLVSCCALTDTERSVGRLQHAARILSE 267 >UniRef50_A8UCF6 Phosphosugar-binding transcriptional regulator, RpiR family protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UCF6_9LACT Length = 292 Score = 233 bits (594), Expect = 7e-60, Method: Composition-based stats. Identities = 66/285 (23%), Positives = 135/285 (47%), Gaps = 3/285 (1%) Query: 2 LYLTKISNAG-SEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 YL K+ F + E+ IAD ++ + + +A G+S+++I KF +K+G Sbjct: 4 NYLEKLLRPYIKSFNDTEKIIADHFIKLGHDVVNKTLSNLADDTGLSEATIFKFVKKIGF 63 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF ++++ + E+ N L + S I+ +DS IA+KL +LAL+ L Sbjct: 64 DGFPNFKISVASNFQNIEERKNE--LTVFSDISKEDSSYAIAQKLVYSNKLALDNLIGSL 121 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D R+ + + +I + I G G S+++ D K ++ + +D H+Q + + L Sbjct: 122 DEERINQALNLIYDSQTIHFFGQGASSVIALDSYHKFLRTRFLCNYISDYHMQLSYATKL 181 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 D S+SG E + A R +I +T + L +L+ + S E+ + Sbjct: 182 GPNDCVFLFSHSGETNETIEVARILRNNQVNIIVLTGNHHTDLVKLSSISFVVDSEESAF 241 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +S ++++R ++ D+L+V L+ ++ ++ +++ + K Sbjct: 242 QSETLTSRILYLTIIDILYVALMYHDEAKNKDSLEKIRKALAVTK 286 >UniRef50_C6JFM8 Transcriptional regulator n=2 Tax=Clostridiales RepID=C6JFM8_9FIRM Length = 285 Score = 233 bits (594), Expect = 7e-60, Method: Composition-based stats. Identities = 64/280 (22%), Positives = 122/280 (43%), Gaps = 3/280 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L I+ T++ +K+AD++ ++ +E Q +S +A+ +S+++I +F + LG Sbjct: 4 SILDSITEQYHSLTKSGKKLADYVFSHTTETQYLSITSLAENCKVSEATITRFCRGLGLS 63 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ ++AL A R + + ++S+DS+ I K++ L+L ++ AL D Sbjct: 64 GYNAFKLALAQ---ADRTTDLGDSSNSAEPVSSEDSISTICAKVHAANLLSLNESYALYD 120 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + K I ++S + I G GGS ++ + + D+H+QA+ Sbjct: 121 EEEMSKAISILSSSRRIYCFGQGGSMIMAMEAWARFSTASPNFVHICDSHMQASAIAMAD 180 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 D + SYSGS +++ + A + VI IT S A L E+ + Sbjct: 181 SKDAILFFSYSGSTRDMCDTLQIASSRHVPVILITHFPKSAGAEFASVVLQCGYNESPLQ 240 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 S S++ + Q + D LF G ++ Sbjct: 241 SGSVAAKVGQLFLIDCLFYGYCSQKPDTCSAARSATAHAI 280 >UniRef50_C0R285 Transcriptional regulator n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0R285_BRAHW Length = 285 Score = 233 bits (594), Expect = 7e-60, Method: Composition-based stats. Identities = 74/285 (25%), Positives = 150/285 (52%), Gaps = 5/285 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M I + +F++ +KI++++ +N E+ +++ ++K G+S +S+V+FA+ LG Sbjct: 1 MNAYLIIRDKYEDFSKAYKKISNYILSNPKEVIKLTALDISKNCGVSSASVVRFAKDLGF 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +G EL++++ S+ + ++++ I++DD++E + K+ + + E L Sbjct: 61 KGLDELKISIA-----SKNGDDDNKYNINTIISADDNVEELCNKIMLLIKSSNEDFFYQL 115 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D L+K ++I A I + G+G S+L DL KL + + D H+ A L Sbjct: 116 DKEALEKAFKLIRNARNIYMLGIGASSLSAYDLFHKLKRANFNAFFYEDAHLNAEFFNYL 175 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + DV IA SYSG E++ + A + A++IA+T + L ++A + + E Sbjct: 176 TEEDVVIAFSYSGRTNEVIYPVKIASSKKASIIAVTRKKTNNLSKMADVLITVPNNEELT 235 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 R +++++ + V+DLL+ G +Q + + + +S LT+ LK Sbjct: 236 RMGAITSKYSSLIVSDLLYFGAIQKDFENIKENLINTSILTRELK 280 >UniRef50_Q6AH41 Transcriptional regulator, RpiR family n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6AH41_LEIXX Length = 289 Score = 232 bits (593), Expect = 8e-60, Method: Composition-based stats. Identities = 83/281 (29%), Positives = 142/281 (50%), Gaps = 3/281 (1%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 L+ + A + E +IA + + + ++ ++A SQ+SI +F Q L G Sbjct: 4 VLSAVRQAVPRLSATEARIAQTVIEHPQRVVDLTIAELAAVCDASQASIARFCQALRYSG 63 Query: 63 FTELRMALIGEYSASREKTNATALHL-HSSITSDDSLEVIARKLNREKELALEQTCALLD 121 + E R+A+ + SRE+ L S I DSL+ + K+ ++ LA+E+T LD Sbjct: 64 YREFRLAVAA--ATSREQATRERFELTESEIDPSDSLQEVVAKIAYQETLAIERTARELD 121 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L ++ I A + + G+G S L +DL KL +IG C D+H+ + + K Sbjct: 122 AEALDAVVAAIIAASRVDLYGIGSSILTAQDLQQKLSRIGLTAFCSVDSHLALSSAALQK 181 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 G+V IA S+SG +E AR GAT +AIT++ +S + ++ L T + E +R Sbjct: 182 PGNVAIAFSHSGETRETNHALAVARAAGATTVAITNVPESSIAAVSDLLLMTQARENFYR 241 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 S +M++RTAQ ++ D LFV + Q + ++ + E + Sbjct: 242 SGAMASRTAQLALVDFLFVRVAQRLYDQMTDSLRLTYEAVR 282 >UniRef50_C5CG85 Transcriptional regulator, RpiR family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CG85_KOSOT Length = 275 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 64/281 (22%), Positives = 129/281 (45%), Gaps = 10/281 (3%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + + ++ +E+E+++A ++ ++ + ++AK S++++ + +KLG Sbjct: 1 MIIVQLKGIYDSLSESERRVAKYIIERPDDVIHYTITELAKFSHSSEATVYRLVKKLGFS 60 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ +++L E S +E S+ S + ++ +E ++T A+LD Sbjct: 61 GYQSFKISLARELSIPQEVIEEG---------SEGSYQNFVERIVQENISLAKETMAVLD 111 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L+K +E+I A + G+G SA+V + SF +G+ D H Q V+ L Sbjct: 112 LDALKKAVELIINARRLVFFGVGRSAVVAQSGSFNFALLGFSSTHYIDPHAQVMVASGLT 171 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV + IS++G+ ++ V + A GA I ITS +SP+ + L T +G Sbjct: 172 NEDVVVGISHTGTIRDTVKSVQVAHAAGAKTIVITSGINSPITEVGDVVLYTAAG-KPST 230 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 S +R + + D+L+ +V K + E+ + Sbjct: 231 SEFTVSRIGEFLILDILYKTVVARMSERLSKHFDKLEEILK 271 >UniRef50_Q7MD38 Transcriptional regulator n=31 Tax=Gammaproteobacteria RepID=Q7MD38_VIBVY Length = 278 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 69/280 (24%), Positives = 142/280 (50%), Gaps = 13/280 (4%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L ++ + F++ + +AD++ N ++Q + +A+ S++++V+ + +G + Sbjct: 6 NLLVRLRSNMEPFSKKLRVVADYILENAHDVQFQTITDLARNTQTSEATVVRLCRDMGYK 65 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+++ RMAL + S + + + I D I + +L+ T L+D Sbjct: 66 GYSDFRMALAVDLSQTESRQ-------QNHIEGD-----ICDVSAQSAVDSLQDTAKLID 113 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L +I+E + +A FI G+G S++VGR L+++L++IG + DTH+ A + Sbjct: 114 RKSLARIVERVHQAEFIGCIGVGASSIVGRYLAYRLIRIGKKAIMFEDTHLAAMSASRSS 173 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 +GD+ A+S SGS KE++ A A K+ V+++T++ SPL L+ L E Sbjct: 174 QGDLWFAVSSSGSTKEVIHAAGLAYKRDIPVVSLTNINHSPLSSLSTEMLVAARPEGPLT 233 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 + +++ + D+L L++ + E +Q ++E+ Sbjct: 234 GGAFASKVGALLLVDVLVNSLLE-SYPEYKDSVQETAEVV 272 >UniRef50_B7GUA9 Transcriptional regulator, RpiR family n=7 Tax=Bifidobacterium RepID=B7GUA9_BIFLI Length = 289 Score = 231 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 65/278 (23%), Positives = 125/278 (44%), Gaps = 3/278 (1%) Query: 5 TKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFT 64 +I + E+ +A +++ ++ E ++ QMA +SQ ++++FA+KLG G+ Sbjct: 9 ERIDHVYPSLRPAERAVAQYIRDHIEEAADLTVGQMADIAHVSQPTVIRFARKLGFGGYR 68 Query: 65 ELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYAR 124 ELR L + + N + D + I K + +++ + LD Sbjct: 69 ELRYVLRHPAAEHKVTFNPLD---GFDLNPWDGEDEIPSKAADGAKALIDELHSALDPKA 125 Query: 125 LQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD 184 +K + +++++ FI I G+ S DL KL +G D ++Q + L G Sbjct: 126 YRKAVALLAESEFIDIFGVENSLTPAMDLFTKLGYLGLTCRLNTDAYLQQIGAGHLTHGA 185 Query: 185 VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSS 244 V +A S+SGS + V A+ GA IAIT+ +PL A TL T ++ Sbjct: 186 VAVAFSHSGSSADTVKALRLAKSHGAKTIAITNAIGAPLASWADVTLLTGRDSHTIYGNA 245 Query: 245 MSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 + + A ++ D+L++G++ + + S + + Sbjct: 246 IFSCVADTALVDMLYMGVILSDYGRFSTALDESGRMIR 283 >UniRef50_A9BH25 Transcriptional regulator, RpiR family n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BH25_PETMO Length = 283 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 69/276 (25%), Positives = 139/276 (50%), Gaps = 6/276 (2%) Query: 7 ISNAGSEFTENEQKIADFLQANV-SELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTE 65 +++ FT++E+K+A+++ + ++ ++ ++A + G S+++I +F +K G + F + Sbjct: 8 LNSRMPTFTKSEKKVAEYILNSKKEDITRITITELATKCGTSEATIARFVKKAGFETFQD 67 Query: 66 LRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARL 125 ++ L + + +I +DS + I RK+ ++E T ++LD Sbjct: 68 FKLTLALD-----NNEDIFEEEKDITIFKNDSPQEILRKVKLGSLKSIESTTSILDINNF 122 Query: 126 QKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDV 185 + I A I+I G+G S+ V + L +KL ++G+ D H+QA + L GD+ Sbjct: 123 LQAANFIRSAKRIEIYGVGSSSAVAKILQYKLTRLGFPSYALEDPHMQAISAATLNFGDL 182 Query: 186 QIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSM 245 I IS SGS K+ V A+K GAT I++T +SP+ + + L+ SGE ++S+ Sbjct: 183 AIGISQSGSTKDTVDSLNVAKKHGATTISLTEHANSPITKYSDVVLEIFSGENPVKTSAG 242 Query: 246 STRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 + Q ++L L + ++L + ++ Sbjct: 243 RSILVQIFAVEILSGLLYSIEYEKALTTGKDTARAV 278 >UniRef50_C1PED1 Transcriptional regulator, RpiR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PED1_BACCO Length = 289 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 68/284 (23%), Positives = 143/284 (50%), Gaps = 7/284 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + +I + + +++E+K+ +++ ++ E + ++ ++AK+ G+S +++V+F + +G Sbjct: 6 NIILQIKSKLTSLSKSEKKLGEYILSHAVETVNDNTSELAKKAGVSPATVVRFCRSIGLS 65 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF++L++ L + S ++ +++ IT ++ + +IA KL ++ QT LL+ Sbjct: 66 GFSQLKIRLYADASGGLDR------EIYTDITPNEDITMIADKLALRFNQSITQTANLLE 119 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + ++KI ++ K+P I + G+G S + D + K +IG V D H+ + Sbjct: 120 TSCIEKITAMVDKSPAIYVYGIGASHVAAEDFTHKFSRIGKPVVHTLDHHLLGSSLINAS 179 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGE-TEW 240 K + +AIS SG E + + A++ G + IT DS L + L GE Sbjct: 180 KDCMFVAISNSGETNEAIKLTQIAKQNGLFTVGITQKRDSTLASIVDAPLIHHGGEAVLL 239 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 RS++ ++ AQ D+L+ V + E + ++ S Q Sbjct: 240 RSAATTSLAAQLFTIDVLYFAYVAKHYHEIMGRLKNSKINIQTF 283 >UniRef50_C0X1P6 Transcriptional regulator RpiR n=21 Tax=Enterococcus RepID=C0X1P6_ENTFA Length = 285 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 67/276 (24%), Positives = 131/276 (47%), Gaps = 15/276 (5%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M Y+ I+ T++E+K+ADF+ + + + + + + ++I++F QKLG Sbjct: 14 MNYIYLINEHYPLLTKSERKVADFILNSGESIIYSTMNDIKTKANVGDATIIRFCQKLGF 73 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF++L++ + E + +++ ++ + + + L+ T L+ Sbjct: 74 SGFSDLKIEIAKEDFSKKKEQPSSGKYHDE--------------VAKSLIEVLQSTSCLI 119 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + +L K I++I++A + I G+G S DL +++G + D H QA V+ L Sbjct: 120 NEEKLTKAIQLINQASSLYIFGVGSSGNTSLDLESMFLRVGIQAKAVLDPHYQAQVASLL 179 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 D+ I S SG K+ + A+ GA ++AIT+ SP+ + A L T E Sbjct: 180 TDRDLVIIFSLSGKTKDTYDSLKIAKNNGAKILAITNYIHSPIGKSADLVLQTAIEE-FL 238 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQR 276 S++ + +Q + DLL Q N + SL + ++ Sbjct: 239 NGGSLAGKISQLYICDLLVHEYEQNNKINSLDLREK 274 >UniRef50_C0C246 Putative uncharacterized protein n=2 Tax=Clostridium hylemonae DSM 15053 RepID=C0C246_9CLOT Length = 292 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 68/284 (23%), Positives = 130/284 (45%), Gaps = 6/284 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L T E+++A+F+ A+ E+ +S +++A + +++IV+ + +G Sbjct: 9 NILATTRFLLPSLTAAEKRVAEFVLASPKEVTRMSLKKLAVRCECGEATIVRLCKTIGVS 68 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ EL+ L + K + L ++ + I ++ L L +T + Sbjct: 69 GYAELKSLLETQLQLPAVKEESVRL------STGQGMGEIVARVFELNILNLRRTLEVAA 122 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + EV+S A I +G + S + +IGY ++D VQ + +K Sbjct: 123 VEEYENACEVLSTANKICFFAIGDAMFPCSYASLRFRRIGYDCYADSDADVQIVNACNMK 182 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 +GDV IAIS+SG K++V A+ +GA I IT S L + + L V+ +T Sbjct: 183 EGDVAIAISHSGRTKQVVEAMRIAKSRGAVTICITKAGKSELTKYSDIVLYNVTTDTTVD 242 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 ++ R A+ ++ D +++G++Q + S +Q SE + K Sbjct: 243 KEIIARRVAEQAMLDAVYMGVLQKMEANSFARLQEVSENLKVNK 286 >UniRef50_A8SDH7 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDH7_9FIRM Length = 281 Score = 229 bits (585), Expect = 7e-59, Method: Composition-based stats. Identities = 57/274 (20%), Positives = 126/274 (45%), Gaps = 7/274 (2%) Query: 7 ISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTEL 66 + + T++ + +A++L + +E Q +S +A++ ++++++ +F + LG +G+ E+ Sbjct: 9 LQQHQGDLTKSGRTVAEYLVQHAAEAQYLSISSLARECQVAEATVFRFCRALGFEGYHEM 68 Query: 67 RMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQ 126 R+AL + L D + + A+ T L + Sbjct: 69 RIALAQANATG-------VLVNQQEPAPDADTATLCEHASALFMTAINGTQNALSPQAVD 121 Query: 127 KIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQ 186 + + ++ A + G GGS +++ + I + AD+H+Q + + + DV Sbjct: 122 QAVALLHSARQVFCMGQGGSMAAAKEICARFACITNKFRAVADSHMQVMAASLMTEQDVV 181 Query: 187 IAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMS 246 + +SYSG+ ++++ A+ GA +I IT DSP +LA L + E+ S S+ Sbjct: 182 LFVSYSGATRDLMETLRTAKANGAKIILITHYEDSPGAKLADIVLLCGAQESPLDSGSIP 241 Query: 247 TRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSEL 280 + A V ++L + + + S + +R++E Sbjct: 242 IKVAVLYVAEVLVLRYILDDKPGSTEAQERTTEA 275 >UniRef50_UPI00016945F6 hypothetical protein Plarl_13824 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016945F6 Length = 248 Score = 229 bits (585), Expect = 7e-59, Method: Composition-based stats. Identities = 68/247 (27%), Positives = 141/247 (57%), Gaps = 3/247 (1%) Query: 38 RQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNATALHLHSSITSDDS 97 +++A+ +S+++IV+ ++ L +G+ EL++ + + + + N+ + I D S Sbjct: 1 QRLAELAEVSEATIVRLSRSLNLKGYQELKLRIAADLA---QSLNSNLAESYQEIHMDAS 57 Query: 98 LEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKL 157 + + ++ +++ T ++L+ L + IEV+ A I + G+G SA++ +D KL Sbjct: 58 SQSLVESISHNNMRSIQDTMSVLNIKELDRAIEVLGGARKITLFGIGASAVIAQDFKQKL 117 Query: 158 MKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITS 217 +I D QAT++ L++ D + ISYSG+ ++I+L +AA+++GAT+I++T Sbjct: 118 TRINRWCEAAYDFDSQATLAANLQEKDAVLGISYSGNTQDILLAMQAAKERGATLISLTK 177 Query: 218 LTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRS 277 +P+ AH L T S E RS +M++R AQ +V D+L+VG+ + N E++ ++ + Sbjct: 178 FGHNPVAEQAHIRLFTSSLEKSIRSGAMASRIAQLNVIDILYVGIARQNYEENILALENT 237 Query: 278 SELTQRL 284 + + + Sbjct: 238 RKAVKMM 244 >UniRef50_Q03Q61 Transcriptional regulator n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03Q61_LACBA Length = 286 Score = 229 bits (585), Expect = 8e-59, Method: Composition-based stats. Identities = 63/282 (22%), Positives = 123/282 (43%), Gaps = 4/282 (1%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 + KI + + E+K+A + + ++ +++A G+S ++I +F +++ + Sbjct: 6 IGKIRGTYDQLSRTEKKVAQMALNTPAVVSEMTIKELASATGVSTATISRFVKRMDYANY 65 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 E MAL + + DSL IA K +LE T L Sbjct: 66 REFTMALAHLAI----EDGGEHQSSFPELAEGDSLATIANKTFHYTISSLEATNEALSEK 121 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L + + + A + GLGGS++ D K ++ V D +Q + L Sbjct: 122 DLARAVLKLINAEKVTFFGLGGSSIAALDGYHKFLRTALSVTYYPDFDIQLMQAARLSDQ 181 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 D + IS+SG E + E ++ ++IAITS + SPL + A T +++ E +RS Sbjct: 182 DCAVVISHSGRNSETLQVVEELQRNDVSIIAITSYSGSPLAQAADVTFLSLTDEVNYRSE 241 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 M + +Q ++ D LF+ V + ++ + ++ ++ + Sbjct: 242 GMYSLISQLAILDTLFMMTVLRVSSRTGNVMTKVHDVIEQTR 283 >UniRef50_Q2J8J9 Transcriptional regulator, RpiR family n=1 Tax=Frankia sp. CcI3 RepID=Q2J8J9_FRASC Length = 293 Score = 229 bits (585), Expect = 8e-59, Method: Composition-based stats. Identities = 77/263 (29%), Positives = 126/263 (47%), Gaps = 7/263 (2%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 L +I + + EQ++A + A+ + S ++A+ G S +++V+F Q LG +G Sbjct: 18 VLERIRALSASLSSAEQRVARQVLADPVAMIHQSVSELAQVSGSSPATVVRFCQSLGLRG 77 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 + EL++ALI E T L +++ D + IA K+ AL + +D Sbjct: 78 YQELKLALIRE-------TLPVERQLVDEVSAADGPDEIAGKVLGGAASALTEAARGIDG 130 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 L I +++ AP +G SA + D +++L +G D HVQ ++ L Sbjct: 131 GVLAAIADLVVAAPRTLFVAVGTSAPLAMDAAYRLTTVGVDARFAGDAHVQHVTARMLAA 190 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 GD+ +A+S++GS E + AA GA AITS SPL L + S ET +R Sbjct: 191 GDLCVAVSHTGSTAETLAAMRAAVDAGAHTAAITSFARSPLTELVRHAVVVGSRETAYRI 250 Query: 243 SSMSTRTAQNSVTDLLFVGLVQL 265 +M++R SV D LF +V Sbjct: 251 EAMTSRIVHLSVLDALFALVVVR 273 >UniRef50_A9NEV7 Transcriptional regulator, RpiR family n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NEV7_ACHLI Length = 281 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 76/285 (26%), Positives = 136/285 (47%), Gaps = 5/285 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M + + + E+ + D+L N + L+ S ++A+ S +S+V+ +KLG Sbjct: 1 MSVMLNMLKNKEALSMAERIVLDYLIENKTLLKDFSVEKIAEAAYTSPASVVRMCKKLGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF + ++ I + S+ + T+ + + D + +K ALE+T L Sbjct: 61 NGFKDFKIDFI--LANSKVEIPETSEYTDVILIKDQNN---GKKAIENNIRALEETINLY 115 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D K +I A I I G G S LV +DL KL +I + ++H Q + + Sbjct: 116 DEKTYTKAASLIMNARKILIFGKGSSFLVCKDLEMKLRRINKFCVAQGESHDQFVDASFI 175 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 DV I IS SG KEI+ A A++ +I+IT + S L ++ L T + E+E+ Sbjct: 176 NNKDVVIFISNSGKTKEIISSALLAKENKTPIISITRIGSSILADISDVVLYTSALESEF 235 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 RS++M++R +Q SV D L+ + S++ ++ + ++ K Sbjct: 236 RSAAMTSRISQMSVVDALYAKCAYTDIDRSIQALETTYRTIKKFK 280 >UniRef50_A2RL41 Transcriptional regulator, RpiR family n=4 Tax=Lactococcus lactis RepID=A2RL41_LACLM Length = 283 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 77/285 (27%), Positives = 143/285 (50%), Gaps = 6/285 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L I S FT E+KIAD++ ++ S++++A ++G S +++V+F++KLG Sbjct: 1 MDTLLIIRQNYSNFTTVEKKIADYIFEVGEKMLEKSAQEVASEIGSSSAALVRFSRKLGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF++L+ L Y+ + + + + ++ I KL +E T A L Sbjct: 61 DGFSQLKQKLSASYAVHEDDED-----YYKEVNDSETPSSIKNKLKVRVNHMVETTNAAL 115 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + + +I +A I + G+G S++V +D+ K +IG +V D H+ + Sbjct: 116 SDDEIMAAVALIDEAESIFVFGIGASSMVAQDIFQKFSRIGKQVFFIQDAHLFVSSLSIS 175 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGE-TE 239 + + I IS G KE++ A R +IAITS +S L +++ + L +VSGE + Sbjct: 176 DRKTIFIGISMKGETKEVIELARVVRGMEIPIIAITSREESTLGQMSDYILHSVSGEDYQ 235 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 R+++ + AQ V D+LF V + ES ++++ + + L Sbjct: 236 MRTAATMSLMAQLYVVDILFYMFVSEHFTESYDKLEKTRDAIKLL 280 >UniRef50_Q03YQ8 Transcriptional regulator n=4 Tax=Leuconostocaceae RepID=Q03YQ8_LEUMM Length = 284 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 74/284 (26%), Positives = 139/284 (48%), Gaps = 5/284 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + ++ ++ EQK+ DF+ +VSE + + ++M++ G+S ++I +F +K+G + Sbjct: 4 NIIAQLRAQRKQYNTTEQKLIDFIINHVSEAREANIQEMSELSGVSTATISRFVKKIGLE 63 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 F E ++L S A ++ L I D +A+K+ E AL T + L Sbjct: 64 SFREFSVSLA-----SAATQMAASVDLFGEIADTDDTIAVAQKVFGGAENALAATVSNLT 118 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 +L + + A + G+GGS++V + K ++ V D VQ + L Sbjct: 119 ATQLDEATLALISARRVGFFGIGGSSIVAFNAYHKFLRTPIDVIAHPDYDVQLMQAVKLN 178 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 D + IS+SG K+ +L A+ +Q +IA+TS DSPL +LA L +++ E +R Sbjct: 179 SNDTAVVISHSGRNKDTLLIAKKLHEQHVKIIAVTSFKDSPLAKLADLVLLSLAEEVNFR 238 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S SMS+ AQ ++ D LF + ++ ++ ++ + + Sbjct: 239 SESMSSLIAQLTIIDTLFTLVGSHLSQDTQSVVDTMRDVIEETR 282 >UniRef50_C0CU66 Putative uncharacterized protein n=2 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CU66_9CLOT Length = 285 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 54/284 (19%), Positives = 125/284 (44%), Gaps = 4/284 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L I + T E+K+AD++ + E+ ++ +++ G+ +++ +F + + Sbjct: 5 NLLISIRSCYDRLTRLEKKVADYVLQHPQEVVKMTINELSNSCGVGDTTVFRFCRSMNVG 64 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ + ++AL S + ++ L +A++++ A+ +T + LD Sbjct: 65 GYQDFKLALA----LSSNVNDMLDSKGEFNLAQSHDLHELAQQVSGVFTDAVNETLSSLD 120 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 Y + + +E I A + + G G S + + ++M+I + +D H+Q T + ++ Sbjct: 121 YDAISRTVEAILNARSVHLFGFGNSGVSALMMQNRMMRILPNIFYTSDVHMQLTSAATMQ 180 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 + V I SG K+ + A+ + GA + IT +P A L + + E + Sbjct: 181 EDSVAIIFCNSGITKDSIRIAQMTHEAGAFTVFITKFMQTPAAPYADVLLCSGATEGPIQ 240 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S+S +Q + LL+ L + + + + +++ K Sbjct: 241 GGSISGVASQMYIVMLLYSELFRRMETRAQENKIKAAHAIAEKK 284 >UniRef50_B0NYS8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0NYS8_9CLOT Length = 282 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 75/281 (26%), Positives = 134/281 (47%), Gaps = 8/281 (2%) Query: 5 TKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFT 64 +I + + E+K+AD+L ++ SE +S ++A SQ++I++F +K+G +GF Sbjct: 9 DQIFSTYDSLYDAEKKVADYLISHPSEAIEMSVSELASHCDASQATIIRFCKKIGCKGFH 68 Query: 65 ELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYAR 124 +L++ L GE E+ + + + D ++ + K ++ T + Sbjct: 69 QLKIKLAGEQRQQEEQVISNEIDI-------DQMDKSLNNIMISKVEEIKATFHNFNPEE 121 Query: 125 LQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD 184 L++I+++I A I+ +G + + D S+K ++G + Q S+ L+KGD Sbjct: 122 LREIVDLIIHANLIEFAAMGDTIPIALDGSYKFNQLGLKAVSSTIWESQEAFSRTLRKGD 181 Query: 185 VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSS 244 V AIS SG+ K +V E + G T IAIT+ + SPL L L T + E + Sbjct: 182 VFFAISASGASKRLVKMVEIVKDNGVTTIAITNQSKSPLAELCDHVLLTATREHIFHDQV 241 Query: 245 MSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 TR A SV D LF+ L +S + + + + K Sbjct: 242 SFTRMAAMSVIDTLFLLLFS-TKWDSFENVAQHEQSVAEEK 281 >UniRef50_A8RZI5 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RZI5_9CLOT Length = 294 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 59/285 (20%), Positives = 140/285 (49%), Gaps = 5/285 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + I + +F ++ +A+++ N +++ + R +A + +S++++ +F + +G + Sbjct: 13 TIVLDIRSKMQDFNPAQKAVANYILNNFYDMEGMPIRDLAVESEVSEATVSRFVKAMGYE 72 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 + ++ E + S+ + +L ++ +T +D+ I RK+ AL+ T ++D Sbjct: 73 NYRAFQL----EVTKSKAERRKGSLKGYAEVTEEDNAPGICRKIFESNIQALQDTLTVID 128 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 Y L++ ++I++A + I G S + + +L ++G D H QA S + Sbjct: 129 YDALERAADLIARARRLCIFAQGRSKVTANSIRLRLHRLGIEGTLYTDPHEQAIASSLMG 188 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSG-ETEW 240 DV + IS G + I++ A +G+++I +TS ++PL + A L TV+ E ++ Sbjct: 189 PEDVAVGISTFGRSRSILVSIRRAAARGSSIIGVTSYQNTPLEKEADILLRTVNNDEADF 248 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S Q + D L++ + + + ++ + + + + Q+ K Sbjct: 249 GSEPSCASVTQMVMLDCLYMLVAKRMEGKAEERFKITRDAIQQEK 293 >UniRef50_B6G0W9 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G0W9_9CLOT Length = 310 Score = 227 bits (579), Expect = 3e-58, Method: Composition-based stats. Identities = 65/280 (23%), Positives = 143/280 (51%), Gaps = 4/280 (1%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 L +I+ +++E+K+ADF++ + + ++ +++AK+ G+S+ SI++F++ +G G Sbjct: 31 LLFRIATKYMALSKSEKKVADFIKNFNGKAEKLTMKKVAKEAGVSEPSIMRFSKSIGLDG 90 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 F EL+ L+ ++ I +D++++I K+ E + + Sbjct: 91 FNELKYCLMK---TKKDDEGTMKPLHGFDINREDTIDMIPGKIVMTVENQINSMLESISL 147 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 +I I A + I + S DL+ KL+ +G V D+++Q + L Sbjct: 148 KSYSDMINCIINAKNVDIYSVENSVSSANDLATKLLYLGINVKMYTDSYLQKISAYNLTS 207 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 DV I ISYSG+ K+ V + A+K+GAT + IT+ DS + + A + T S + + Sbjct: 208 EDVAIGISYSGNSKDTVEMIKTAKKRGATTVVITNYKDSKIVKYADILICTSSDQMLY-G 266 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 ++ +R Q + D++++G++ + + ++++ ++ + + Sbjct: 267 DAIFSRAIQLVINDMIYMGIIHSDYDKYIEILNKNEKAIR 306 >UniRef50_Q03CI3 Transcriptional regulator n=10 Tax=Lactobacillaceae RepID=Q03CI3_LACC3 Length = 280 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 76/283 (26%), Positives = 135/283 (47%), Gaps = 7/283 (2%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 +L ++ + E+K+A +LQA+ + ++++ G+S ++I +FA+ LG Sbjct: 4 FLVQLQIYKPNLSGQEKKLAAYLQAHPDHASQANISELSQLTGVSTATISRFAKALGYTN 63 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 F LRMAL + + L + ++ DS++ +A+K+ AL T A LD Sbjct: 64 FQALRMALA-------QTSPEDDHALFAELSPKDSVDTLAQKIFTSNIDALRTTLANLDT 116 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 L K ++ I+ A + + GLG S LV D K ++ VA AD H+Q + L Sbjct: 117 DALTKAVKWITHAEHLGLFGLGASNLVALDGYHKFLRTAIPVAYAADYHMQLMAATHLGP 176 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 D I S+SG K+ + AE A+KQ +I IT S L ++A V+ E+ +R+ Sbjct: 177 RDAMILTSHSGEDKDAIALAELAKKQQVPLIVITGSPTSRLVKMADAAFVAVAEESRYRT 236 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 ++ A+ S+ D LF+ D ++ + ++ + Sbjct: 237 EALHALIAEISIMDTLFMISAIKTDSQTAPLFRQVRATIDATR 279 >UniRef50_A8RDU7 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RDU7_9FIRM Length = 281 Score = 226 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 67/282 (23%), Positives = 138/282 (48%), Gaps = 3/282 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L K+ + +E ++ ++ N ++ S+S++++A + S +++++ ++L Sbjct: 3 MSVLVKLRE-YHTLSNSENEVRMYILRNSKKVISMSTQELAAKSYTSPATVIRLCKRLEL 61 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +G++EL++ L E A +T + ++ DSL + K+ ++E+T LL Sbjct: 62 KGYSELKIQLASEIKAF--ETMNLDVVDQTTFKKGDSLTELIDKVTDISIHSIEETRLLL 119 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 DY L + I A I + G+G S + D +K M+IG ++C + Q + Sbjct: 120 DYEVLLCVARQIMDASIIDLYGVGASNNIAFDAGYKFMRIGKSISCLSLIDRQRIQAINS 179 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 I ISYSG EI+ A+ K ++IT + L L + L S E+ + Sbjct: 180 DSSHFAIIISYSGETPEIIEIAKILEKNNVPAVSITGSIQNQLVNLVEYNLFVSSRESNF 239 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 R+ ++ +RT+ + DL+++ + LN +S K + ++ +++ Sbjct: 240 RNGAIVSRTSTLYMLDLIYITCISLNYDDSAKRLGQTLTISK 281 >UniRef50_Q040R4 Transcriptional regulator n=8 Tax=Lactobacillus RepID=Q040R4_LACGA Length = 283 Score = 226 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 74/285 (25%), Positives = 130/285 (45%), Gaps = 6/285 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M TK+ N F +KIAD+L A+ ++ + K S +S+++F Q+LG Sbjct: 1 MDLSTKVLNNYPNFKGASKKIADYLLAHPKTFLQEDAQGLGKMTKTSAASMIRFCQQLGF 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +G + ++ L + E+T + H D+ ++ +KL E EQT L+ Sbjct: 61 KGLKDFQIQLAQDTPQDNEETIDPIVDHH------DNPHIVLQKLLSSIEKNTEQTAHLI 114 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D L + I + A I + G+G S+L +DL +K ++ V D H+ Sbjct: 115 DGLALNQAINFLKNADRIYLAGVGASSLPAQDLYYKFIRSDKNVVFNQDIHIALERICYS 174 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 D + SYSG +EI+L A+ ARK +I +T SPL LA L + E Sbjct: 175 HSTDALVIFSYSGLTQEILLMADQARKNHTPIIVVTRSRQSPLVELADVVLGVSTDEKLL 234 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 R ++++ ++ V+ +LF+ + + + + +T +LK Sbjct: 235 RVGAINSLFSEMFVSSVLFLATINQELPRLEERFRETELITNQLK 279 >UniRef50_C5EPZ9 Transcriptional regulator n=2 Tax=Clostridiales RepID=C5EPZ9_9FIRM Length = 295 Score = 226 bits (577), Expect = 7e-58, Method: Composition-based stats. Identities = 70/285 (24%), Positives = 134/285 (47%), Gaps = 9/285 (3%) Query: 7 ISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTEL 66 I + ++EQK AD+ ++++S MA+ G+SQ ++++F + LG +GF E Sbjct: 9 IKRIYASLRKSEQKAADYYLGYDGPVETMSIAAMARAAGVSQPTVMRFVKALGLEGFKEF 68 Query: 67 RMALIG--------EYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCA 118 + ++ + L I++ D E + ++ + L+ Sbjct: 69 KYQVLKASMGGNGSGMGEEEGGRSEEVLRYGYEISARDRPEEVPGRVVAQSVSYLDDALK 128 Query: 119 LLDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQ 178 + + + + ++I A I + + SA V DL KLM +G+ D ++Q + Sbjct: 129 HISPSSIGRAAKLICGARQIAVYYVENSASVAGDLVTKLMYLGFNCIMYNDIYLQHISAG 188 Query: 179 ALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGET 238 L DV I ISYSGS K V + A+K+GA IAIT+ S + A L T S + Sbjct: 189 NLDSRDVAIGISYSGSSKNTVDVMKLAKKKGAATIAITNFEHSLIAGHADILLCTSSQQL 248 Query: 239 EWRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 + +++ +R +Q +V D++++G++ + + + SS + +R Sbjct: 249 LY-GNAIFSRMSQTAVVDMIYMGIILRDYGHFTEKLDESSRIIRR 292 >UniRef50_C2H8J8 Bifunctional RpiR family transcriptional regulator/sugar isomerase n=16 Tax=Enterococcus RepID=C2H8J8_ENTFC Length = 286 Score = 226 bits (576), Expect = 7e-58, Method: Composition-based stats. Identities = 69/285 (24%), Positives = 152/285 (53%), Gaps = 9/285 (3%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M +++I + +++ E+K+A+++ N+ ++ ++++ ++A+ G+S ++V+F++K+G Sbjct: 5 MSVISRIESMMEDYSSAEKKLANYIIGNIEKVPTMTANELAEASGLSAPTVVRFSKKIGF 64 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 Q T+ ++ + E ++ S I +++S I KL ++A+++T +L Sbjct: 65 QSLTDFKITISTELQTGIDEG-------FSDIEANESFYSIKNKLGNNAQVAIKETVDIL 117 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + +QK++E + A + + G+G S+LV D+ K ++G + E D HV + Sbjct: 118 EEETIQKVVECLETAESVFLYGVGASSLVVEDILQKWSRVGKPIIFEKDIHVLLPQLVSN 177 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSG-ETE 239 +K V +S SG ++V AE A+ +IA+T ++PL ++A + T E Sbjct: 178 EKKKVLWLVSNSGRSTDVVALAELAKNMNIEIIALTQFGNNPLSKIADVLVQTSRPKEIT 237 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 RS++ ++ AQ + D++F + N+ S K ++++ E Q Sbjct: 238 NRSAATNSLLAQFATIDIIFYFYMAKNESLSEK-VKKTREAIQDY 281 >UniRef50_A8UBX8 Phosphosugar-binding transcriptional regulator, RpiR family protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UBX8_9LACT Length = 285 Score = 226 bits (576), Expect = 7e-58, Method: Composition-based stats. Identities = 69/284 (24%), Positives = 141/284 (49%), Gaps = 8/284 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L I ++E+KIA+ + + ++ +S+ +A + G S +++++F + +G + Sbjct: 4 NVLLTIREKKITLPQSEKKIAETILRDPVKVIQMSATDLATEAGSSSAAVIRFCRSIGIK 63 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GFTEL++ L + ++ +L++ I +D++LE + +K+ ++T +LD Sbjct: 64 GFTELKLQLSADSQGIKD-------NLYTDILADENLEQVKKKMLINTNHLFKETNNVLD 116 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 +++++ E++ ++ I + GLG S +V D+ K ++G V C D H+ T Sbjct: 117 TKQIERVSELLHESSIIYLYGLGASHIVASDIQQKFSRMGKIVVCSLDQHLLVTSMAVAG 176 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDT-VSGETEW 240 + V +S SG KKE++ A++ G +A+T+ T++ L A L T + E Sbjct: 177 ENAVFFGVSNSGEKKEVLALMIMAKELGLKTVALTNNTENALSLEADIALKTAFAHEAPL 236 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 RS + + Q D+LF N ++ +++S QR Sbjct: 237 RSGATISLLTQMYAVDILFYDYASKNYDLTVTNLEKSKAAIQRY 280 >UniRef50_C0X6G8 RpiR family transcriptional regulator n=23 Tax=Enterococcus RepID=C0X6G8_ENTFA Length = 283 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 75/286 (26%), Positives = 146/286 (51%), Gaps = 6/286 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M + I +F++ ++IAD++ + + L S+++ ++A S +S+ +F+++LG Sbjct: 1 MEPIRSIRQKYKDFSKVNKRIADYILKDPTRLLSLTANEIASNSETSPASVTRFSKQLGF 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 + EL++++ +AS K + + + +DDS++ I K+ +E + Sbjct: 61 DSWEELKLSIAAVQAASNGKKDIDPI-----VAADDSVDTICMKVESLLNATIEDLFYTV 115 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D L++ I + KA I + G+G S+L +L K + G + D+H+ Sbjct: 116 DKQALERAIAHVKKAEKIHLVGIGASSLTTYNLYHKFNRAGRQAIFNYDSHMMLEFLNYA 175 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 D+ I +SYSG KE ++ E A+ +GATVI ITS +R L+ L + E Sbjct: 176 TAQDILITVSYSGLTKEALIACEIAKNRGATVIFITSNDGENVRSLSDEVLLVPNNEHLI 235 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLN-DVESLKMIQRSSELTQRLK 285 R ++S+ + ++ D+L++G +Q + D E + + +S+L RLK Sbjct: 236 RVGAISSIASSMAIGDVLYLGSIQDDLDTEIERNMIETSQLVSRLK 281 >UniRef50_B9DJX2 Putative RpiR family transcriptional regulator n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=B9DJX2_STACT Length = 288 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 80/285 (28%), Positives = 128/285 (44%), Gaps = 10/285 (3%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 + I T+NEQ IA FL + ++ +S++ + S +++++ A KLG +G Sbjct: 6 LIIHIREQMKHLTKNEQHIAQFLLEHPEKVLEMSAQTLGDVTKTSSATVIRCAHKLGFKG 65 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 F +L+++L H + I D+S I RKL LE T LL+ Sbjct: 66 FVDLKLSLSRNLPQHE-------AHNYKEIAQDESPREIKRKLLSRAAYTLETTEVLLED 118 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 L+ +++ + I + G+G S +V D+ K + G V AD HV ATV K Sbjct: 119 QALEALVDKLYDVQKIVVFGVGASHIVAEDIYQKFTRAGMEVIQSADAHVLATVLAGYHK 178 Query: 183 GD--VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFT-LDTVSGETE 239 D + I +S SG +E + A A GATV AITS +DS L A L S E Sbjct: 179 KDNVLFIGVSNSGHNQETLRLAHVAHYYGATVAAITSRSDSKLAGEADIVLLHDASSEKS 238 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 R ++ S+ AQ D+LF + + + + + + + Sbjct: 239 LRLAATSSLIAQLMTVDILFYTYLSKDYQAHVAHLSETKKAVEMY 283 >UniRef50_C0X148 RpiR family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X148_ENTFA Length = 295 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 67/281 (23%), Positives = 131/281 (46%) Query: 5 TKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFT 64 +I + E+KI+D+ + S L ++ +A ++G+SQSS+ +F +K+G GF Sbjct: 8 QRIRIKKPNLSLTEKKISDYFVHSESLLTQMTLESLANEIGVSQSSVYQFVKKIGYSGFQ 67 Query: 65 ELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYAR 124 E ++ + + N +++ I+ DD IA+K+ + +L L Sbjct: 68 EFKIDIARNSNYQPTFQNVNSVNGADDISPDDDSITIAKKVLQANIYSLSNATQFLTKEL 127 Query: 125 LQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD 184 L ++ ++ A + G GGS++V D K ++ YR D H+Q + L D Sbjct: 128 LDNVLALMYSAKTLHFFGQGGSSIVAFDSFHKFIRTNYRCNYIFDYHMQLSFVTKLTSED 187 Query: 185 VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSS 244 S+SG KE + A +K A +I +T + S L L+ + V+ E +R+ S Sbjct: 188 CVFIFSHSGKTKESINLARQVKKTNAKMITLTGNSGSELAGLSDEAIIVVTEEGLFRAES 247 Query: 245 MSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +++R + +V D+L+ + N ++ +++ + K Sbjct: 248 LASRISYLTVMDILYTNTMYHNFDQNADSLKKIRDNISTTK 288 >UniRef50_Q13K65 Transcriptional regulator, RpiR family n=7 Tax=Burkholderia RepID=Q13K65_BURXL Length = 287 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 61/278 (21%), Positives = 127/278 (45%), Gaps = 9/278 (3%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + I +A + E+K+AD + ++V S ++A++ +S+ S+ +F + +GA Sbjct: 5 NLIPHIRSALANLRPAERKVADMVLSDVDFAMRASITELAQRAEVSEPSVTRFCRAIGAH 64 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G + +M L + + +++ DD ++ + K+ + LD Sbjct: 65 GLRDFKMQLAQSVAGG-------VPYASTAVARDDDVQTLMDKVGEAAIGGITHARGALD 117 Query: 122 YARLQKIIEVISKAPFIQITGLG-GSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 A ++ I +S A + G+G GS LV +D + + +++ D H+Q + + Sbjct: 118 PAVVESAIAALSSARRVFFFGVGSGSGLVAQDAALRFLRLDIASTAFTDGHLQRLYAGLM 177 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + GDV AIS+SG E+ + A+++GAT IA+T++ S L L L Sbjct: 178 EPGDVAFAISHSGRSVEVNESIQIAKERGATTIALTNVG-SRLAWLVDIPLLLRVPSPID 236 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSS 278 ++ +R + D L +G+ ++L+ ++ + Sbjct: 237 PNTPGVSRLVHLCIMDALAIGVALKAGPKTLEKMRHAK 274 >UniRef50_B1R0U2 Transcriptional regulator, RpiR family n=9 Tax=Firmicutes RepID=B1R0U2_CLOBU Length = 284 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 66/284 (23%), Positives = 141/284 (49%), Gaps = 6/284 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + I + F E E+KIAD++ ++L ++ ++A+ G S +++ +F +K + Sbjct: 6 SIIDTIYAEYNSFFEAEKKIADYILKYGTKLIEMTISELAEAAGTSDATVTRFCRKCNMK 65 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF L++ L E S S+++ + + S+++++ + K ++QT ++ Sbjct: 66 GFHHLKITLAKELSESQKEDTRVSGDV-----SEENIKESLNNILFNKIEEMKQTILTIN 120 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + ++I++++ A +Q +G + V D +K ++G Q + LK Sbjct: 121 EEKFKEILQILRNAGIVQFVAVGNTIPVALDGCYKFNQVGVASVANTIWETQIAYTYNLK 180 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 + DV IAIS SG+ K ++ E A+++GA IAIT+ SPL +L+++ + T + E + Sbjct: 181 ENDVVIAISNSGASKRLIDVIEIAKEKGAVTIAITNSDKSPLAKLSNYHIKTATREKLFL 240 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +R + +V ++LF+ + + + K + R + K Sbjct: 241 EEYYFSRISAMTVIEILFL-FMTVGKHDVYKTLSRHEQSIADDK 283 >UniRef50_D0DKU0 Transcriptional regulator n=1 Tax=Lactobacillus crispatus MV-3A-US RepID=D0DKU0_9LACO Length = 284 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 66/285 (23%), Positives = 136/285 (47%), Gaps = 5/285 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M +I +E ++ + IAD + N L + +++++ S +S+++F ++L Sbjct: 1 MNVRDRILENYTELKKSSRIIADAVLENPKILLNKNAKEIGNYTNTSAASVIRFCKQLNY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +G + ++ L + + +T DD + + KL E + Sbjct: 61 KGLKDFQIDLAQSTVKQSQLK-----PIDMIVTKDDKADEVMTKLRVSLSQNFEDLSKTI 115 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D LQK + +I K+ + I G+G S+ +DL +KL++ G V D H+ Sbjct: 116 DIKDLQKAVSLIKKSRAVYIAGIGASSFSAKDLFYKLIRSGKTVFYNDDVHIALERIYYS 175 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 DV I SYSG +E++L + A+K ++A+T ++SPL +LA L E+ Sbjct: 176 TPKDVMICFSYSGLTQELLLAVKQAKKNKTPIVAVTRKSESPLSKLADINLKLPDHESLM 235 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 R ++++ AQ ++++L++ + + E + ++ + +L ++LK Sbjct: 236 RVGAINSTFAQMFISNVLYLCSISSDLGEVKQEMEATGKLLEKLK 280 >UniRef50_P0ACS8 HTH-type transcriptional regulator rpiR n=34 Tax=Gammaproteobacteria RepID=RPIR_ECOL6 Length = 296 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 68/278 (24%), Positives = 133/278 (47%), Gaps = 7/278 (2%) Query: 7 ISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTEL 66 + TENE +I ++L + + + + +A+ L +S++ IVK ++ LG GF L Sbjct: 20 LRMKQEGMTENESRIVEWLLKPGNLSCAPAIKDVAEALAVSEAMIVKVSKLLGFSGFRNL 79 Query: 67 RMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQ 126 R AL +S S + L S + D++ + + K+ + + ++++ + Sbjct: 80 RSALEDYFSQSEQV-------LPSELAFDEAPQDVVNKVFNITLRTIMEGQSIVNVDEIH 132 Query: 127 KIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQ 186 + +A + G GGS + D+ K ++IG R D H+ + L++GDV Sbjct: 133 RAARFFYQARQRDLYGAGGSNAICADVQHKFLRIGVRCQAYPDAHIMMMSASLLQEGDVV 192 Query: 187 IAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMS 246 + +++SG ++ E A+K GA +I IT SP+ +LA + + + + ET + S Sbjct: 193 LVVTHSGRTSDVKAAVELAKKNGAKIICITHSYHSPIAKLADYIICSPAPETPLLGRNAS 252 Query: 247 TRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 R Q ++ D FV + QLN ++ +Q++ + Sbjct: 253 ARILQLTLLDAFFVSVAQLNIEQANINMQKTGAIVDFF 290 >UniRef50_UPI00017F2FF2 transcriptional regulator n=1 Tax=Escherichia coli O157:H7 str. EC4024 RepID=UPI00017F2FF2 Length = 285 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 74/283 (26%), Positives = 139/283 (49%), Gaps = 4/283 (1%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 + T I+ +E T+ E +I F++ N +S ++A + + ++SI++F +KLG +G Sbjct: 7 FNTLINTRINELTQTEIRIYQFIKNNRMRFIDMSIAKLADAMNVGEASIIRFCKKLGYKG 66 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 +EL+ L E + + + S +S+ IA++L A+ +T AL + Sbjct: 67 LSELKTTLRLET----DTDDTLLSKVTSLDEQTNSMTGIAQQLANNNYFAINETLALQEE 122 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 L + + +S A + G+G SA+ ++ M+I V D H S + K Sbjct: 123 QALVRAADYLSNAGQVYFYGIGMSAISVLYAKYRFMRIMANVDALIDNHTMTLNSNNVGK 182 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 DV +AIS+SG +++V + +++GA I I+ L S L + A L T ++S Sbjct: 183 KDVVVAISHSGETRDVVDALKRVKEKGAVTIVISKLQHSSLSQYADVVLLTGGTSNPYQS 242 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S + AQ+ + D+LF L+ +N +++ I S ++ + K Sbjct: 243 DSSTITAAQSFMVDVLFNALLFINRGGNVEKIISSLDIINKTK 285 >UniRef50_D0R5V5 Transcriptional regulator n=10 Tax=Lactobacillus RepID=D0R5V5_LACJF Length = 272 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 66/283 (23%), Positives = 141/283 (49%), Gaps = 14/283 (4%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M ++ + + + T++E K+A+++ + + + + + ++IV+ +KLG Sbjct: 1 MEFIQRYNQNKDKLTKSENKLANYIATHTEHVIYDTIKSLGTANNTGDATIVRLCKKLGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF++L++AL + + K++ A + ++ K+ ++E+T L+ Sbjct: 61 SGFSDLKIALAQDSMMTTSKSHEEAQ----------TSSELSSKVL---ISSIEKTEELI 107 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + + L++ + +++KA I I GLG S RD ++IG E+D H+Q V+ L Sbjct: 108 NPSVLKQAVSLLAKARRIHIFGLGHSGESARDYERTWLRIGLIANAESDPHIQVQVATLL 167 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 K D+ + +S SG K+ + A++ GA +IAIT+ SP+ +L +L T E Sbjct: 168 SKDDLVVGLSLSGHTKDTYDSLKVAKEYGAKIIAITNDLTSPIAQLGDVSLQTSVSE-FM 226 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 +++ + +Q + D+L +LN V+ K+ +++ + Sbjct: 227 NIGTVAGQVSQLYLCDVLAREYEKLNKVDVDKIKEQALAAVMK 269 >UniRef50_D0KLH9 Transcriptional regulator, RpiR family n=1 Tax=Pectobacterium wasabiae WPP163 RepID=D0KLH9_PECWW Length = 320 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 71/265 (26%), Positives = 129/265 (48%), Gaps = 4/265 (1%) Query: 5 TKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFT 64 T I+N ++ Q IA+++ N S + + +++A ++G+S+++IV+F + +G G Sbjct: 38 TYIANILHGLSDTNQTIANYVLQNPSMVAQLPVKKLAVEIGVSEATIVRFCKHIGYAGLL 97 Query: 65 ELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYAR 124 EL+ AL E + +L + I +D+ +A+K+ + A+++T L+D Sbjct: 98 ELKSALNRELF----DDSDLSLPVTPDILMNDTRHDVAQKIALTVDRAVKETIDLIDMQT 153 Query: 125 LQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD 184 + +I+ + A + G G S L + K+ +IG D LK D Sbjct: 154 INQIVSLFISARRVMFIGFGASGLAALEARDKMNRIGIDSDAFTDRFSMTLKLANLKPDD 213 Query: 185 VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSS 244 + +A S+SG E+V + A K GAT +AIT T SPL L ++ L T ++ S Sbjct: 214 LVVAFSHSGETPEVVNAFKLAEKAGATRLAITHSTHSPLTSLGNYVLLTCGESERYQGDS 273 Query: 245 MSTRTAQNSVTDLLFVGLVQLNDVE 269 + TR +Q + + L L + N + Sbjct: 274 IGTRVSQLFMIEFLCTELTKQNFKD 298 >UniRef50_Q28KP3 Transcriptional regulator, RpiR family n=6 Tax=Alphaproteobacteria RepID=Q28KP3_JANSC Length = 306 Score = 223 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 100/284 (35%), Positives = 163/284 (57%), Gaps = 5/284 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 LT + + +++IAD + + + +SS ++A+ G SQSS+VKF QKLG Sbjct: 27 SILTIMQAQLPTLSAGDRQIADTILGDPDRMARLSSGELARAAGRSQSSVVKFCQKLGFS 86 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ +LR+A+ + + +A +HSSI D + A+KL K AL++T ++ Sbjct: 87 GYQDLRLAVTRAAATQKAPNDA----VHSSIEVSDDASMTAQKLLASKIHALQETLSINP 142 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L + ++ A +Q++G+G S+LV RD +KL K+G V +AD+H+Q S L Sbjct: 143 AKNLDAARDALNGAARVQLSGVGASSLVARDFVYKLQKLGISVLFDADSHIQMAHSATLT 202 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV +++S SG E + AEAA K+GAT+I +T L +PL +A L TV+ E + R Sbjct: 203 PDDVLVSLSQSGFSLETLRIAEAAAKRGATIITVTGLHPNPLADVADKALCTVTDEDQVR 262 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 SS++++R AQ + DLLF+ LVQ+ D ++ +I ++E LK Sbjct: 263 SSAITSRDAQLILLDLLFLRLVQVRDG-AVDLIGGAAEAVAPLK 305 >UniRef50_A4WDW6 Transcriptional regulator n=10 Tax=Enterobacteriaceae RepID=A4WDW6_ENT38 Length = 274 Score = 223 bits (569), Expect = 6e-57, Method: Composition-based stats. Identities = 66/266 (24%), Positives = 132/266 (49%), Gaps = 15/266 (5%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L ++ S ++ +QK+ F+ + S + ++ ++A++ S++S+ + + LG + Sbjct: 6 NLLLRLRQGVSGYSPTQQKLGSFVLNDPSRVLYLTITELARESDTSEASVTRLCRTLGCK 65 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+TE +MAL + H + D ++ I E LAL+ T LLD Sbjct: 66 GYTEFKMALALDVQRE-----------HVPLKKGDEIDEIVE----ESILALQDTSRLLD 110 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L K + + ++ + I G+ SA++G L +KL+++G +D H + + L Sbjct: 111 REILLKAAQALHQSRSVYIYGVAASAIIGDYLHYKLLRLGKPAQLFSDMHRASMNATTLT 170 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 D+ +AIS SGS ++++ + ARK+GA V+A+++ SPL L+ L E Sbjct: 171 SDDLVVAISSSGSTRDLLHVVKLARKRGAHVLALSNTPRSPLTSLSDMLLVAAKPEGPLS 230 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLND 267 + +++ + + +LL ++ L+D Sbjct: 231 AGALNAKVGVMLLVELLATTMISLDD 256 >UniRef50_C3RHA3 Transcriptional regulator n=3 Tax=Bacteria RepID=C3RHA3_9MOLU Length = 288 Score = 223 bits (568), Expect = 7e-57, Method: Composition-based stats. Identities = 70/278 (25%), Positives = 137/278 (49%), Gaps = 5/278 (1%) Query: 6 KISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTE 65 +I + +E+K+AD++ +L+ +S +AK++ +SQ ++++F + +G F + Sbjct: 8 RIKTIYNILRPSEKKVADYILNYCGKLEDLSMTLLAKEVAVSQPTVMRFVKAIGYDSFKQ 67 Query: 66 LRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARL 125 ++ L Y +K N + SI +DD + + K+ LE L Sbjct: 68 FKLELAKNY----DKENNIDILYGFSINTDDKIMDLPGKIVATATSMLENALKSLSLVNY 123 Query: 126 QKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDV 185 QK + +I+++ I I + S V DL KL+ +G V C +D ++Q+ + L + + Sbjct: 124 QKTVALINQSQHISIYAVENSMGVAHDLMTKLIYLGKSVTCHSDYYLQSIDASNLTRDSL 183 Query: 186 QIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSM 245 I ISYSG+ K V + A+ GA IAI + ++ L R L T + + + ++ Sbjct: 184 AIGISYSGNSKNTVEVLKIAKDAGAQTIAIVNFENTMLTRYGDIVLSTSNDQFLY-GDAI 242 Query: 246 STRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 +RTAQ ++ D++++G++ + K + S L + Sbjct: 243 FSRTAQIALVDMIYMGVIISDYDNYTKKLDHYSRLIKH 280 >UniRef50_C1IBM1 Phosphosugar-binding transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IBM1_9CLOT Length = 266 Score = 223 bits (568), Expect = 7e-57, Method: Composition-based stats. Identities = 61/264 (23%), Positives = 134/264 (50%), Gaps = 16/264 (6%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L ++ +EF++ E+ IAD++ + ++++++ +AK++G S ++I +FA+K+G Sbjct: 1 MDILCEVQRKYNEFSDKEKDIADYIMQHGDKIKNINITDLAKEIGTSGATITRFAKKIGC 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 F ++++ L + I +D I + +E+T L+ Sbjct: 61 DSFVDMKIKLGSN-------------KVELPINDEDG---IFSYTYQYYNEVIERTKMLI 104 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D + K++ I KA I I G+G S L +++ +L+++G+ V C +D+H+ S + Sbjct: 105 DKEEIFKVVNEIKKAKNIYIYGVGSSGLTCKEMMQRLLRMGFNVHCISDSHMMIINSSIV 164 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + D+ I IS SG +E++ +++ GA +++IT S + + + + Sbjct: 165 SENDLVIGISISGETQEVIHSLRKSKENGAKIVSITGFEGSTVSKYSDIKFIVYNPNFVD 224 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQ 264 RS ++T+ + + DL+ + L++ Sbjct: 225 RSRFINTQFSAMYLLDLISMVLLK 248 >UniRef50_C6J2D0 Transcription regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J2D0_9BACL Length = 284 Score = 223 bits (568), Expect = 7e-57, Method: Composition-based stats. Identities = 67/285 (23%), Positives = 133/285 (46%), Gaps = 8/285 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 LT++ + E+E+K A ++ +E+ +S +A + G S ++I + + LG Sbjct: 5 SVLTQMEAMLEQLPESERKAAQYILTASAEVSGLSIHAVADKAGTSAAAITRLCRSLGLS 64 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF +L+M L + + + I ++++ + +K A++ L Sbjct: 65 GFPDLKMRLSVDNAK-------PQRPGYYDIERGETIQNVIQKTVSNSLQAIQDMMLHLQ 117 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 ++++++ +A I + G+G SA+V D + K +++G + D H+ A + Sbjct: 118 PELIEQVVDSFREASVIHMYGVGASAIVAADAAQKWLRLGKQAFALQDEHLIAAALASAP 177 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTV-SGETEW 240 G + + ISYSG+ KE++ A+K G I ++ + + LA L T + E Sbjct: 178 PGALFMGISYSGNTKEVLQLFRVAQKYGVRTIGLSRFGNHKVAELADLMLYTPQAPEATL 237 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 RS + S+R AQ + D+LF E++ + ++ E T LK Sbjct: 238 RSGASSSRLAQLVMIDILFFAYASTQYEETILRLSQTHEATAFLK 282 >UniRef50_Q2SNY6 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SNY6_HAHCH Length = 285 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 64/283 (22%), Positives = 131/283 (46%), Gaps = 8/283 (2%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 L+ + ++EQK+A+ + N +++ + +A + G+S+ +IV+F + + Sbjct: 7 ILSWLRQNRDTLRKSEQKVAECVLRNPNDVIHMRIVDLATEAGVSEPTIVRFCRTICFDS 66 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 F +++L + ++ + +T A S DSL+ + K+ + + +L+Q L + Sbjct: 67 FQSFKVSLAQQLASMQRQTPFRAR-------SGDSLQQLGAKIFSDVQSSLQQVFNQLAW 119 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 R+++ IS +P + G G SA V D K ++ D Q ++ ++ Sbjct: 120 DRIEQACAWISNSPRLYFFGYGASAAVAADAQQKFFRLKPSTHACPDPDTQMLIAGLVET 179 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 DV IAIS+SG ++ AR GA V+AI S S L +A+ + E Sbjct: 180 NDVIIAISHSGRTNNLIQSCMQARASGAKVVAI-SPPQSALANIANLNIGVSVDENADAF 238 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + +++R A + D + L Q D + ++ + ++ + L+ Sbjct: 239 TPLASRLAHLMILDTIASNLFQKLDEQHVQKLNQAKKNLSSLR 281 >UniRef50_D1AK74 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AK74_SEBTE Length = 284 Score = 221 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 72/284 (25%), Positives = 147/284 (51%), Gaps = 9/284 (3%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 ++ K+ + ++ T++E+KIA+F+ N + ++++S ++K++ + Q+++++F++KLG Sbjct: 9 MFQVKLKSVYNDLTKSEKKIANFIMKNFEKTKTMTSYDISKKVNVGQATVIRFSKKLGYS 68 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 F EL ++ L +I+ D + K+ + ++ T L Sbjct: 69 SFNELINSI---------NKLDQEDILEKNISLGDDIATTNTKIANQYIDVIKLTLELNP 119 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 +++IE I A I + G+G SA+V D KL ++G DTH+Q ++ L Sbjct: 120 VYVFEEVIEAIIAAERIVVLGIGNSAIVSTDFVNKLARVGMNAFTNLDTHLQFSMISNLG 179 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 K D+ I IS SG +EI+ A+ A++ +I+IT T + L + F L T S + R Sbjct: 180 KNDLLILISDSGETREIIEAAKLAKQNKTRIISITKFTKNKLHAYSDFILKTASFDINLR 239 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + ++R Q ++ D++F+ +++ + + ++I S + LK Sbjct: 240 LDATTSRITQFTIIDMIFINILKTDFSKYKEIITNSDNAVKLLK 283 >UniRef50_C2HLD1 Transcriptional regulator n=3 Tax=Lactobacillus RepID=C2HLD1_LACAC Length = 284 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 72/281 (25%), Positives = 134/281 (47%), Gaps = 8/281 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + I S+ + EQ + D++ AN + S S ++++K GIS ++IV+F +++G Sbjct: 3 NIFSIIKGKKSQLPKKEQLLGDYIIANPENVISSSIQKLSKDTGISTATIVRFCREIGTN 62 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF++L++ L+ S+ + + + + + I + E A+E T + L+ Sbjct: 63 GFSDLKLQLVAAQSSVNN-------NDYHEFDAGEGIAAIKNTMAARFESAIEATQSGLN 115 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 ++K + I + I + G G S +V D+ K M++G + +D HV + Sbjct: 116 DNSVEKAVRKIYNSSSILVYGAGASGIVASDMYQKFMRVGKNINYISDLHVALAQLASFT 175 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVS-GETEW 240 D+ I IS G E+ + A K G + +T+ S + + A L T GE Sbjct: 176 SDDLLILISNDGKTTEVSDIQKVADKFGIPTLLLTANPRSFVAKKADLVLLTQDIGEPSI 235 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 RS + ++ +Q V D+L V ++ E LK ++RS+E T Sbjct: 236 RSGATTSLISQMFVVDVLVFSYVSVHSDEVLKKLKRSNEAT 276 >UniRef50_Q03HR4 Transcriptional regulator, RpiR family n=2 Tax=Pediococcus RepID=Q03HR4_PEDPA Length = 270 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 56/285 (19%), Positives = 127/285 (44%), Gaps = 15/285 (5%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M + + + E+KIA + + ++++ ++ ++K+ +S +++ +F +K+G Sbjct: 1 MNIIDVVEQKYPSLSRQERKIALKVVQHPADVKKMNINTLSKKAEVSTATVTRFVKKMGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 F++ ++ L S E + L ++ + T + Sbjct: 61 PDFSQFKLGLAEATSNITENVDNAPLP---------------DQVTDFYNQMITGTWKRI 105 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + L ++ +I AP + I GLG S ++LS +LM++G +D+H S + Sbjct: 106 NQKTLNQVAMLIKNAPRVFIFGLGSSGYNAQELSQRLMRMGINAFAPSDSHTMYISSSIM 165 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 +K D+ I +S SG E+ A++ V++IT+ DSPL ++ + L E Sbjct: 166 QKDDLLIVLSVSGKSNEVNEAVAVAKQHQLKVVSITAFDDSPLAEMSDYQLSVQYSEFVD 225 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + ++++ + D+L L+Q ++ ++ L +++K Sbjct: 226 NTQFINSQLGVVYIIDILSTMLLQNETYKARYQQTVAAILNRKMK 270 >UniRef50_C8SX74 Transcriptional regulator, RpiR family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SX74_9RHIZ Length = 314 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 63/275 (22%), Positives = 125/275 (45%), Gaps = 8/275 (2%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 ++ + ++ SE E+++AD + +V S+ +A++ G+S+ ++ +F + +G +G Sbjct: 28 IISLVKDSYSELRRAERRVADVVLDDVKYAVDASNAALAQRAGVSEPTVTRFCRAIGCEG 87 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 + ++ L + + + E AL++ LD Sbjct: 88 LRDFKLKLAQSLVVGALYLAKSPAPGSGNGMP------FWNAVFGEARRALQEAERQLDP 141 Query: 123 ARLQKIIEVISKAPFIQITGLGGSAL-VGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 LQK E+I+KA + + GLGGS+ + ++ ++L + G V + D ++ + LK Sbjct: 142 VELQKAAELIAKARQVTVFGLGGSSSALAQETQYRLFRYGITVNAQCDPYLMRMTASTLK 201 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 GD+ IAIS +G +E++ E A+ A I +T+ D+ L R L E Sbjct: 202 PGDLVIAISATGRTREVIEAVELAKHYRANAIGVTA-PDTELARACDVRLAVAVPEYPDT 260 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQR 276 ++R A ++ DLL V D + + ++R Sbjct: 261 LKPTASRYAFLAMIDLLAVASAYKLDASARETVRR 295 >UniRef50_B7UNF1 Predicted transcriptional regulator, RpiR family n=11 Tax=Escherichia RepID=B7UNF1_ECO27 Length = 281 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 63/279 (22%), Positives = 128/279 (45%), Gaps = 8/279 (2%) Query: 7 ISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTEL 66 I + + E+K+AD++ ++ E+ + S +++++ S+++IV+ +KLG QG+ L Sbjct: 10 IQSNYPTLHQAEKKVADYILSHAHEVVNYSVTELSEKSHASEATIVRTCKKLGYQGYYHL 69 Query: 67 RMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQ 126 ++AL E + + T + +A L +++ L Q+ + L+ Sbjct: 70 KIALAKEV--------INPDNSYPDNTDFTDITSLATFLLKKQAEDLIQSTQFFNAEVLE 121 Query: 127 KIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQ 186 I+++++ I G S + ++K ++G + +Q + ++ K D+ Sbjct: 122 SILKLLANCDTIFFFAAGNSNPLAVYGAYKFSQLGLKTVVHVSPEMQINAAYSMGKRDLA 181 Query: 187 IAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMS 246 I IS SGS +V + +++GA + IT+ SPL +L+ L+T + + + S Sbjct: 182 IGISNSGSTNLMVDIFKVVKERGAKSVCITNYIKSPLSKLSTHQLNTAVSDKIFFEAFDS 241 Query: 247 TRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 TR V D+L + + N K R L R K Sbjct: 242 TRVPAMGVIDMLVLLFMYKNKAHYEKYRTREEFLGSRFK 280 >UniRef50_UPI0001BCD92E RpiR family transcriptional regulator n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCD92E Length = 288 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 68/284 (23%), Positives = 134/284 (47%), Gaps = 5/284 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L KI + + E+++AD++ N +++ ++ +A G S +++V+F +K G Sbjct: 6 SILEKIFSIYPVLFDAEKRLADYVLQNEAKVVDMTVSDLAAACGTSDATVVRFCKKCGCN 65 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF L++ + E + K + A + S+ ++V R + K+ L QT A +D Sbjct: 66 GFHHLKINMAKEMAT---KPSDGAPIVGSNELDCARMDVSLRNIFASKQEELRQTLAEID 122 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 A + ++E I A FI +G + V D ++K ++G + Sbjct: 123 PAVFRSVVERIRAARFIFCAAMGNTIPVAMDAAYKFNELGLTAISAPVWENMLAMMHTAT 182 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETE-W 240 DV +AIS SG K+++ AAR +GA ++ +T+ S + R++ L VS E + Sbjct: 183 PDDVLLAISASGETKDLMRIVSAARGRGAYIVLVTNQVHSSIARVSDRVLHAVSQERMFF 242 Query: 241 RSSSMST-RTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 R+ S S+ R + +V + ++ L+ + S + L+++ Sbjct: 243 RTFSFSSTRLSMTAVIEAVYYMLLSVKRDSSALVDTHEQRLSEQ 286 >UniRef50_A6T0F7 Transcriptional regulator, RpiR family n=2 Tax=Oxalobacteraceae RepID=A6T0F7_JANMA Length = 286 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 122/283 (43%), Gaps = 8/283 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + L I +++E+K+A + + + +AK+ +S+ ++V+F + +G Sbjct: 1 MLLDSIRTQYDSLSKSEKKVALAVLEQPELAIAENITALAKKAEVSEPTVVRFCRAIGFD 60 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ ++ L + + + + + +D + K+ L LD Sbjct: 61 GWQAFKLKLAQGLALAPGTGDESPML-------EDMAADLVDKVCNRSINTLLDLRNSLD 113 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 +++ ++V+ +A I+ G G S ++ D K + G +D H+ + + LK Sbjct: 114 ANAIEQALQVLGRANTIEFYGQGTSGIIAADAQHKFFRSGVPTVAYSDPHIHSIAASLLK 173 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 KGDV +AIS GS ++ + AR GA ++ + + + +PL LA + Sbjct: 174 KGDVVVAISQRGSSLSLLRSVQLARSSGAAIVVL-APSGTPLAELATVLIPIDLHFHTDP 232 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 + +S R A V D+L VGL E K + + + Q+ Sbjct: 233 YTPISARLAHLVVIDILAVGLALRLSPERRKKMLNAQKALQKF 275 >UniRef50_Q1J2N3 Transcriptional regulator, RpiR family n=2 Tax=Deinococcus RepID=Q1J2N3_DEIGD Length = 290 Score = 220 bits (561), Expect = 5e-56, Method: Composition-based stats. Identities = 60/255 (23%), Positives = 121/255 (47%), Gaps = 8/255 (3%) Query: 20 KIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASRE 79 ++ D + + S++ ++++ G S +++V+ Q LG G+ E ++ L + SR+ Sbjct: 28 RVIDQILMDPERFLSLTIAELSEAAGTSDATVVRLVQHLGFGGYQEFKLQLSRALAVSRK 87 Query: 80 KTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPFIQ 139 ++ D+ I RK+ AL+ T L+ ++ ++ A I+ Sbjct: 88 --------ADLTVEPQDASVTILRKIFDSSNTALDDTLEHLNLEAFSAAVQAMTLARHIE 139 Query: 140 ITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIV 199 + G+G S +V ++ +++G D + L+ DV IA+S+SG++ ++V Sbjct: 140 LIGMGASGVVALSGQYRGLRLGLSCRASTDPGTFLSTCSLLEPTDVLIAVSFSGTRPQVV 199 Query: 200 LCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDLLF 259 A AR+ GA V+A+T L +PL ++ H TL + +R ++T+ Q ++ D LF Sbjct: 200 QAARLARQAGAIVVALTGLGRTPLSKVVHHTLTVSAPGDRYRPEGLATQIPQVAILDALF 259 Query: 260 VGLVQLNDVESLKMI 274 L D + + Sbjct: 260 TSLHVAQDPYLSERL 274 >UniRef50_D0I0X8 Sialic acid utilization regulator RpiR family n=1 Tax=Vibrio cholerae CT 5369-93 RepID=D0I0X8_VIBCH Length = 282 Score = 220 bits (560), Expect = 6e-56, Method: Composition-based stats. Identities = 70/283 (24%), Positives = 139/283 (49%), Gaps = 10/283 (3%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L+++ ++ + +ADF+ +N Q ++ ++A+ S++++++ + LG + Sbjct: 8 NLLSRLRYGMEGYSPKLKTVADFIVSNADSAQYLTITELARDTMTSEATVIRLCRDLGFK 67 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+++ RMAL E S + N D + I +L+ T L+D Sbjct: 68 GYSDFRMALAIEISQPQFTKNNDVAKEDGDRIDDATQSAI---------TSLQDTSILID 118 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 ++ +I ++I +A I G+G S++VGR LSF+L +IG DTH+ A + Sbjct: 119 RKQINRICQMIHQADNIHCVGVGASSIVGRYLSFRLTRIGKSSTMFEDTHIAAMRAVKST 178 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 D+ AIS SGS K++V A A+KQ + V+++T++ SPL + + E Sbjct: 179 PSDLWFAISSSGSTKDVVYVATRAKKQQSPVVSLTNIRHSPLSVTSDEVMVAARPEGPLT 238 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 + +++ + + D+L LV + E + ++ ++E+T Sbjct: 239 GGAFASKVSALLLVDILINQLVAEH-AEYAESVKDTAEVTMAF 280 >UniRef50_C0C5Q9 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C5Q9_9CLOT Length = 287 Score = 220 bits (560), Expect = 7e-56, Method: Composition-based stats. Identities = 77/283 (27%), Positives = 132/283 (46%), Gaps = 8/283 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGI-SQSSIVKFAQKLGAQG 62 L KIS + T+ ++++AD++ N SE+ + S + + S++S+VKF + LG G Sbjct: 11 LAKISELYPQLTKGQKQLADYILKNPSEVVNKSITDLISHTSLKSEASVVKFYRLLGFDG 70 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 F ++ L E N T H S IT DD I +K+ +L + + Sbjct: 71 FKSFKIKLAQEL------VNRTFYHSESDITIDDEPTEIKKKVFLGAMSSLSKNADIAAG 124 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 + +++S A I I G G SA + + F+L ++G C D H+ A + + Sbjct: 125 ECMD-AQKLLSSAKRIIILGHGASASICQYAFFRLTELGLNCVCNQDAHMNAAILTHPRP 183 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 GDV + +S SG ++ E A ++ I IT S + RL+ L TVS E + Sbjct: 184 GDVILCVSQSGETADLYKQIEMAYQRRIPAILITGAPGSSIARLSQVILSTVSEERNILT 243 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 ++++R +Q + D LF + N E L +Q + ++ K Sbjct: 244 DALNSRVSQFCLIDALFSMISIANANEMLPRLQDTRNTFKKYK 286 >UniRef50_P46117 Uncharacterized HTH-type transcriptional regulator in aarA 3'region n=5 Tax=Enterobacteriaceae RepID=YARA_PROST Length = 282 Score = 220 bits (560), Expect = 7e-56, Method: Composition-based stats. Identities = 69/285 (24%), Positives = 140/285 (49%), Gaps = 7/285 (2%) Query: 1 MLYLT-KISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLG 59 M LT K+ + + EQ++A FL + +++ ++A+ G+S +S+++F +++G Sbjct: 3 MSTLTSKLESLLNRGKGTEQRLARFLLDSRDNFVAMNVAELAQAAGVSSASVIRFTRQMG 62 Query: 60 AQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCAL 119 +G+++ ++ + + + ++ L S+ D E I K + A+E++ L Sbjct: 63 YRGYSDFKVDYLSDEKQYKAES------LSGSLNPYDDTEQIIAKSGQMFITAIEKSLEL 116 Query: 120 LDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQA 179 LD + +I + I +A I + G+G SA+V D+ +KL+++ D HVQ + S Sbjct: 117 LDPNTMDEIAQKIVEAKRIVLFGVGTSAIVAYDIFYKLIRVNKYALFSPDLHVQLSYSSN 176 Query: 180 LKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETE 239 + D+ IAI+ G+ +I + A K+G + I +T RLA L E Sbjct: 177 VDADDLVIAITAKGNTPDINHMLKLANKKGCSTIVLTRFGQDEAVRLADLVLPYFYDEQL 236 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 +++ ++ + Q V D LF + L + + + +Q+ E +L Sbjct: 237 FQTGVITPQVLQMVVFDTLFFKYLTLTNEDVVLALQKEREAIIQL 281 >UniRef50_UPI000197BCAC RpiR family transcriptional regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197BCAC Length = 283 Score = 219 bits (559), Expect = 7e-56, Method: Composition-based stats. Identities = 78/273 (28%), Positives = 142/273 (52%), Gaps = 5/273 (1%) Query: 6 KISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTE 65 K+ A + E+++A+++ AN +QS+S + +A++ +S ++I++ KLG QGF++ Sbjct: 5 KLREARDSLSTKEKQVAEYIIANKKNMQSMSIQSLAQENKVSTTTILRLCHKLGYQGFSD 64 Query: 66 LRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARL 125 L++ LI + T L I +DS+E + K+ ++ ++E+TCAL++ Sbjct: 65 LKIDLISSINHKSYGT-----LLQEDIDINDSMETVNHKVGLIEKSSIEETCALVNLNAF 119 Query: 126 QKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDV 185 + E+ISK+ I I G G S LV ++ ++L+KI V C D +Q ++ L + D+ Sbjct: 120 KLANELISKSKKIVIYGAGSSGLVAKEFEYQLIKIKKDVNCHLDYSIQFSIVNTLDQNDL 179 Query: 186 QIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSM 245 I IS+SG E + AR+ IAIT + S + LA L T+S E R + Sbjct: 180 VIVISHSGENHECIKLLTLARELKVPTIAITKMGQSSVSSLAETVLHTISTEHVSRLIPI 239 Query: 246 STRTAQNSVTDLLFVGLVQLNDVESLKMIQRSS 278 ++ +Q +V ++L L E ++ + Sbjct: 240 RSKISQLTVINMLITNLFIKQYDERIQKQISTR 272 >UniRef50_UPI0001BC57B3 oxygen-independent coproporphyrinogen III oxidase n=2 Tax=Fusobacterium RepID=UPI0001BC57B3 Length = 538 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 72/245 (29%), Positives = 142/245 (57%), Gaps = 3/245 (1%) Query: 41 AKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEV 100 A+ + ++IV+F++KLG +GF + +++L + + +++ +H I D+ E+ Sbjct: 295 AENIYQGGTNIVRFSKKLGFKGFPDFKLSLSQDIGNRKAESHVNI--MHEEIKPTDTFEI 352 Query: 101 IARKLNREKELALEQTCALLDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKI 160 I +K+ E +A+ T + D+ L+K +++IS+A I + G+G S +V +D FKL+++ Sbjct: 353 IGKKVATENTMAVNNTYEITDFKELEKAVKMISEARKIMLAGVGFSGIVAKDFHFKLLEL 412 Query: 161 GYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTD 220 G + E DTH+Q + + + DV IS+SG E+ A+AA+ + +I +TS+ Sbjct: 413 GKQTLFENDTHMQLSYLATMNENDVLFVISHSGKTLEVFNLAKAAKNRKVKIITLTSVVQ 472 Query: 221 SPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSEL 280 SP+R L L TV ++++R++++S R +Q +V D++++ L+ N+ I + EL Sbjct: 473 SPIRELGDIKLSTVEMKSDFRATALSPRISQLTVIDMIYIKLMLENED-LQDYIFNAIEL 531 Query: 281 TQRLK 285 + K Sbjct: 532 VKGFK 536 >UniRef50_D1PSB4 Transcriptional regulator n=3 Tax=Clostridiales RepID=D1PSB4_9FIRM Length = 282 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 56/274 (20%), Positives = 122/274 (44%), Gaps = 7/274 (2%) Query: 7 ISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTEL 66 + + SE T + +++AD+L + E Q +S +A + G+++++I +F + LG G+ E+ Sbjct: 10 LRSRYSELTRSGRRVADYLTRHAEEAQYLSISSLAAECGVAEATIFRFCRSLGFDGYNEM 69 Query: 67 RMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQ 126 +++L + + + + A+ T ++L+ + Sbjct: 70 KISLAQANAI-------PTAAGADKLEPGADTATLCTHASAVALEAINGTRSVLNPEAID 122 Query: 127 KIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQ 186 ++ +A + G GGS ++ D+ + + + D+H+Q + + DV Sbjct: 123 AAATLLQRARQVFCFGQGGSQILANDIWARFATVSTKFRTAGDSHMQTIAASLMVPEDVV 182 Query: 187 IAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMS 246 + ISYSGS ++++ + GA VI +T D+P LA L + E+ S++ Sbjct: 183 LFISYSGSTRDMMETLRIVKGNGAKVILLTHYADAPGTALADVVLLCGAKESPLDGGSIA 242 Query: 247 TRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSEL 280 + A V ++L + N + +R+S+ Sbjct: 243 AKIAVLFVAEVLVLRFTLDNQELAAIARERTSKA 276 >UniRef50_A9MLD6 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- RepID=A9MLD6_SALAR Length = 293 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 69/260 (26%), Positives = 120/260 (46%), Gaps = 4/260 (1%) Query: 7 ISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTEL 66 ++N E + KIA ++ + +++A+++G+S+++IV+F +K+G G L Sbjct: 12 LANILGSLGETDAKIAGYILQQPGLVVQFPVKKLAQEIGVSEATIVRFCKKVGYGGLLNL 71 Query: 67 RMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQ 126 + L E A N +L I DDS +A+K+ E + +T LLD ++ Sbjct: 72 KADLKRELLAE----NDLSLPSSPDIFLDDSRNDVAQKIALTIETSARETIGLLDMKIVK 127 Query: 127 KIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQ 186 ++E A + G G S L + K+ ++G D LK+ D+ Sbjct: 128 PVVERFLSARRVMFVGFGASGLAALEARDKMNRLGIDSDAFTDRFTMTLKLANLKRDDLV 187 Query: 187 IAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMS 246 +A S+SG E+V A+K+GA +AIT SPL LA+ T + S+S Sbjct: 188 VAFSHSGETPEVVNAFRLAQKKGAYTLAITHSPHSPLNELANTFWLTSGEAGPMQGDSIS 247 Query: 247 TRTAQNSVTDLLFVGLVQLN 266 TR +Q + + L + + N Sbjct: 248 TRISQLFIIEFLCTEITRHN 267 >UniRef50_A0Z4E2 Transcriptional regulator n=3 Tax=Bacteria RepID=A0Z4E2_9GAMM Length = 291 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 68/278 (24%), Positives = 123/278 (44%), Gaps = 8/278 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 LT+I A ++++ KIA + A+ S +A+Q +S+ S+ +F ++LGA Sbjct: 6 NVLTQIQAALPGLSKSDTKIAHVVLADPEAATHASIALLAQQANVSEPSVNRFCKRLGAT 65 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ + ++ L A ++ + +D++ KL AL L Sbjct: 66 GYPDFKIWLARSLVAG-------VRYISQVVDPEDTVTTYPGKLVDNTVNALLLAREQLP 118 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L+ +E + A I G+G SA V +D K + V D + ++ Sbjct: 119 LKTLEVAVEHLDAAGRIYFFGMGTSAAVAQDAEHKFFRFQTPVTTHTDPLMLRMLAAGGS 178 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 +GDV + IS++G + IV A A GATVI++T+ DSPL +++H + + E Sbjct: 179 QGDVFVFISHTGRTEAIVDAAALASASGATVISLTA-QDSPLAQVSHCVIGLEAPENTED 237 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSE 279 M++R + D+L G+ ++ + R E Sbjct: 238 YLPMTSRIVHLVIIDILVTGVTLKRGEPCIEHLARIKE 275 >UniRef50_Q15N75 Transcriptional regulator, RpiR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15N75_PSEA6 Length = 282 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 95/285 (33%), Positives = 161/285 (56%), Gaps = 6/285 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M TKI + +E K+A F+ ++ + ++ +SS+++A +G+SQSS+VKFAQKLG Sbjct: 1 MSTFTKIKAIKDTLSNSELKLAKFVLSSSNAVRDLSSQELANVVGVSQSSVVKFAQKLGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +G+ ++ +I +++ + N LH IT +DS + ++ KL K L +T L Sbjct: 61 KGYPAFKLGVIDALNSTASEGN-----LHGKITLNDSFKQVSEKLLSSKVAVLTETKNLN 115 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + A + +E++ A I I GLGGSALVG+D S+KL K+G E D H Q + L Sbjct: 116 EEAAFHQAVELLKSAKRILICGLGGSALVGKDFSYKLQKLGMLAIEEPDMHAQLAFAATL 175 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + D+ AIS SGS +EIV + A++ VI +T +P+ LA L +V+ E Sbjct: 176 SENDLVFAISESGSTREIVNVVKQAKQNSCKVITVTRYGATPVSDLADIKLYSVAEEESA 235 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 R SS+ RTAQ + D+LF+ + Q + + +++++++ + + Sbjct: 236 RLSSIMARTAQEFIIDILFIAITQSSR-QGRQLLEKTNSVVSDFR 279 >UniRef50_B7CB00 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CB00_9FIRM Length = 291 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 72/287 (25%), Positives = 137/287 (47%), Gaps = 7/287 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + + +I EFT+ E+ IAD+L N E++++S +A+ S S+I +F KLG Sbjct: 1 MIIERIIKQ-EEFTDVEKSIADYLLKNGYEVKNMSISSLAQVTYSSTSTITRFCHKLGLD 59 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ + ++ EY A +K ++++ T +DS E IA++L R + + +T + + Sbjct: 60 GYKKFQILFNSEYEAYEKKG---LVNVNYPFTGEDSYEQIAKQLERLNQETIAKTISCFN 116 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 Y +L +I+ + KA I I +G S V + K+++ G V + A Sbjct: 117 YNQLNRIVRRMDKADMINIFSVGTSVTVAMEFQQKMLRFGKIVNLTQQACFLPGYALAGT 176 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGET--- 238 + V + IS SG +++V ++QG + +TS +S + R + E Sbjct: 177 ENTVNLVISLSGENRDVVESLNLLKEQGRYTVGMTSTPNSTVARECKEVILVDIEENNSY 236 Query: 239 EWRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 E + + + +A + V D LF L + N + K+ + + + +R K Sbjct: 237 EAKIDTFAIYSAFHFVLDCLFSFLYKYNFDSNTKITKEKAYMIERNK 283 >UniRef50_C8JWL0 Phosphosugar-binding transcriptional regulator n=3 Tax=Listeria monocytogenes RepID=C8JWL0_LISMO Length = 273 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 69/266 (25%), Positives = 135/266 (50%), Gaps = 13/266 (4%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L IS+ +++EQK+A + +N E++++S +A + +S+IV+F++K+G Sbjct: 1 MDLLATISSYFPSLSKSEQKVAQLILSNPDEVENLSINDLALMANVGESTIVRFSRKIGL 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF +L++AL+ ++ ++ D + R+ L+ T + + Sbjct: 61 TGFQDLKIALVKYQTSQKQNIT-------------DESNEAKDLVYRQFVDGLQDTKSFI 107 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + +L++ ++I +A + I +G SA + LS +L ++G V D H+Q+ + Sbjct: 108 EQEKLEQAAKMIHRAEHVYILSVGTSAFIAMQLSNRLKRLGKFVEFVPDGHLQSIYVTMV 167 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 KK D+ I IS SG+ KE++ E A + GA V+ +++ +S + ++ +L S E Sbjct: 168 KKTDIVIGISKSGNTKEVIQNIELASQSGAPVVTLSNFINSKISQMGDVSLVASSKEFLS 227 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLN 266 + S S +Q + D L LV +N Sbjct: 228 DAGSFSAEVSQLYLLDTLIKVLVDIN 253 >UniRef50_A1BB20 Transcriptional regulator, RpiR family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1BB20_PARDP Length = 280 Score = 216 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 64/270 (23%), Positives = 118/270 (43%), Gaps = 6/270 (2%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 L +I + + FT E+++A+ + S + S A+ +S+ SI++F ++L G Sbjct: 15 MLDRIRQSLASFTPAERRVAEAVLDTPSTAITWSISDAARIAKVSEPSIIRFCRRLDCDG 74 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 F + R+ L + + + A + DD L + + + A+E+ LD Sbjct: 75 FPDFRLKLAQQLAKHQPAPQPLARPGSGN---DDPLAAMVDDIFQRAGQAIEEARRDLDL 131 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 L+ + ++ KA + I G G S + + +L + +D +Q + L Sbjct: 132 GALRAAVAMLGKARRVDIYGYGSSGFMASEAQHRLAALAIPAVAYSDPTLQMHSAPLLGP 191 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVS-GETEWR 241 GD+ +S+SG ++ E ARK GA V+AI S S + LA L+ + ++ R Sbjct: 192 GDLLFVLSFSGLTSYLISNIEIARKAGAPVLAI-SPKGSIVASLADVNLNLNAYRQSSGR 250 Query: 242 SSSMSTRTAQNSV-TDLLFVGLVQLNDVES 270 + + R A V D LF + + E Sbjct: 251 MAVPTGRVAPMYVLLDALFAAMAEEMGGEH 280 >UniRef50_D2ELR8 Transcription regulator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2ELR8_PEDAC Length = 280 Score = 216 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 74/278 (26%), Positives = 140/278 (50%), Gaps = 12/278 (4%) Query: 7 ISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTEL 66 + N +FT+ E+++A F+ + +++Q+A Q+G S +++++ A+++ G EL Sbjct: 10 LKNQLGDFTKKEKQVARFIIKYPQAVIDSNAKQVADQVGTSAATVIRLAKRVCKNGLPEL 69 Query: 67 RMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQ 126 + L E + + I D+LEV+ +K+ +EQT + ++ Sbjct: 70 KERLKNETMVNDK--------FFEEIDPADTLEVMKQKMEYRINHTIEQTNRTVKGGAVR 121 Query: 127 KIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQ 186 +++ +A + G+G S LV DL K ++G VA D H+ A ++ K V Sbjct: 122 NAAKLVDQADVVYTYGIGASHLVADDLQQKFGRLGKPVAQTQDVHLLA--AEMSKGRGVV 179 Query: 187 IAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTL-DTVSGE-TEWRSSS 244 + IS SG KE + AAR V+AIT + SPL R + L + SGE + RS++ Sbjct: 180 VLISNSGETKETLQLLGAARALDLPVVAITRVLSSPLARQSTVVLAHSDSGEGNQLRSAA 239 Query: 245 MSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 ++ AQ V DLL+ ++L+ +++ + +S ++ + Sbjct: 240 TTSLMAQLYVVDLLYYSFLKLHFEDNVDQLTKSRKIIK 277 >UniRef50_C7HWK5 RpiR family phosphosugar-binding transcriptional regulator n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HWK5_9FIRM Length = 297 Score = 216 bits (550), Expect = 8e-55, Method: Composition-based stats. Identities = 68/284 (23%), Positives = 140/284 (49%), Gaps = 4/284 (1%) Query: 3 YLTKIS-NAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 YL +I + S FT+ E A++ E+ + + +A++ S +SI KF +KLG + Sbjct: 16 YLERIILSKKSTFTKTENFYAEYFLKLDDEILNKTISNVAEETESSTASIFKFIKKLGFK 75 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ + ++ L + + + + TA+ +S+ +DS + IA K+ ++ + Sbjct: 76 GYKDFQLNLATNINKNSDDSLLTAI---TSVNENDSPDEIANKIMAFNIQSMYTLKEDIK 132 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + + +I K+ I G+GGSA + D K ++ Y V +D+H+Q + + Sbjct: 133 NIPFESCLNLIKKSKKIHFFGMGGSATIAYDSYHKFLRTKYMVNYISDSHMQLSACTKMD 192 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 + D S+SG E++ ++ A+K A +IA+T S + +++ + S E+E Sbjct: 193 QNDCIFVFSHSGRTLEVIEVSKVAKKNKAKIIALTGNPKSEMVKISDEAMILPSIESEHG 252 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + S++ R +V D+L + L+ N E+ K +++ + + K Sbjct: 253 TESLNARILYLTVMDILLISLMYDNVEENKKYMKKRLDALKVTK 296 >UniRef50_Q03CT7 Transcriptional regulator n=7 Tax=Lactobacillus RepID=Q03CT7_LACC3 Length = 289 Score = 216 bits (550), Expect = 9e-55, Method: Composition-based stats. Identities = 66/287 (22%), Positives = 130/287 (45%), Gaps = 8/287 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M + SE +E E+KI D++ A+ + ++S +AK G S +S+ + A++L Sbjct: 1 MSVKGNYQSTRSELSETEKKIVDYVMAHSQAVLTMSVHDLAKAAGTSPASVSRAARRLQF 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 G+ EL+M L + +++ I + +L I +KL + +L +T + Sbjct: 61 SGYNELKMQLAADLKGDTNQSDD------QEIQKNATLTTIKQKLLIDANQSLRETVDQI 114 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + A + II +I ++ + + G+G S L ++++ K ++GY D ++ ++ Sbjct: 115 NEANVDTIINLIHQSDRLLVFGVGASYLAAQNIAQKWGRLGYPCHFSDDLNLFLPLAATA 174 Query: 181 K-KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSG-ET 238 + + IS SG E+VL A+ A+K G VI T L + L + A ++ T E Sbjct: 175 DVEQTLCWFISNSGESPEVVLAAKLAKKAGLQVIVTTKLGKNSLTKYADVSIQTSQPMEA 234 Query: 239 EWRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 R ++ + Q + D+L+ V + +S + Sbjct: 235 RNRFAATQSLHTQFMLIDILYYAYVSRYYDAAKIATDQSKAAVTAYR 281 >UniRef50_D2BPE4 Transcriptional regulator, RpiR family n=1 Tax=Lactococcus lactis subsp. lactis KF147 RepID=D2BPE4_LACLK Length = 273 Score = 216 bits (550), Expect = 9e-55, Method: Composition-based stats. Identities = 70/285 (24%), Positives = 134/285 (47%), Gaps = 13/285 (4%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L +I F E+E+KIA+F+ N ++ + +A+ +S++SI +F +KL Sbjct: 1 MNILDQIQVNFQNFFESEKKIAEFILKNPKKVIDMPIALLARNSNVSEASISRFCKKLNL 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF +L++ L + + + + SL + + +++ K L L Sbjct: 61 TGFHQLKIELAR-----------IQDNENIKVNKNTSLNELIKNISKIKTTELIAATDNL 109 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D LQ II++I+ G + V D S++ ++G D VQ + + Sbjct: 110 DIDNLQSIIKIITNVKLTHFVASGNTIPVAEDASYRFNQLGITSVVFDDWQVQTAFTLNM 169 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 +K D+ I IS SG K ++ A+++ +I+IT+ DSP+ RL++F L + S + + Sbjct: 170 RKEDLLIVISNSGESKSLIKLINIAKEKKIPIISITNHPDSPIARLSNFHLTSFSRDYFF 229 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + +R + + +L+F+ L Q D L+ I+ ++ K Sbjct: 230 HNDYYFSRLSAMYLIELIFLILSQ--DKSRLENIKLHEQIISEAK 272 >UniRef50_Q1WQV4 Transcriptional regulator, RpiR family n=4 Tax=Lactobacillus RepID=Q1WQV4_LACS1 Length = 274 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 65/285 (22%), Positives = 136/285 (47%), Gaps = 14/285 (4%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L I S + E+K+A + N E+QS++ ++AK+ G+S ++I +F +++ Sbjct: 1 MNLLNNIEAIFSTLSRQERKVALKVLQNPQEVQSMNITKLAKKAGVSNATITRFVRRMEC 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 F + ++ L ++S E + + + K+ + L+ T L Sbjct: 61 SDFHDFKLKLAISAASSPE------------VPVSSESDSMGDKVYEFYQKVLQGTWKQL 108 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D + I+ I+KA + + GLG S ++ + +L+++G C D+H+ S + Sbjct: 109 DTDTIHNIVHAITKARRVYVYGLGSSGYTAQEFTQRLIRMGIAAFCTVDSHMMFIDSTIV 168 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 DV IAIS SG+ ++ + A+++G +I+IT SPL L+ ++ + Sbjct: 169 NSDDVIIAISQSGNTDDVNVACSLAKQKGTKIISITGFYQSPLIELSTWSAVVKNSNFVD 228 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + ++++ A V D++ + L++ ++ S + ++ EL K Sbjct: 229 NTRFINSQLAIVYVIDIITMELMEKSEYSST--MNKTVELIMDRK 271 >UniRef50_Q02YU6 Transcriptional regulator n=4 Tax=Lactobacillales RepID=Q02YU6_LACLS Length = 273 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 80/283 (28%), Positives = 141/283 (49%), Gaps = 18/283 (6%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M T I T++E+KIA+++ A+ + + + K + + ++IV+F QKLG Sbjct: 1 MKIETVIKEKYELLTKSEKKIANYVLASKERIVYGTMNDIKKAIKVGDATIVRFCQKLGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF++L++ + E S S++ +N T L L + +E+ L +T + L Sbjct: 61 SGFSDLKIEVAKE-SYSQKSSNRTDLTLFFDENENSIIEI------------LHETKSKL 107 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D + +K ++IS+A I I G+G S +DL ++IG V + +H Q + L Sbjct: 108 DLEQFEKSSKLISEASAIYIFGVGLSGNTAKDLEAMFLRIGVPVKAISGSHFQLQTAALL 167 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 KK D+ I IS SG E+ + A++Q A +I ITS SPL +L+ L TV+ E + Sbjct: 168 KKTDLIIGISLSGKTLELFESIKIAKEQKAQIITITSSDYSPLAQLSDINLQTVNEE-FF 226 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 S++ + +Q + ++L V+ ++ +S E R Sbjct: 227 DGGSLTGKISQLYICEIL----VKNHERLYKDKSIQSREAIIR 265 >UniRef50_D1AYR1 Transcriptional regulator, RpiR family n=2 Tax=Fusobacteriaceae RepID=D1AYR1_STRM9 Length = 281 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 71/277 (25%), Positives = 140/277 (50%), Gaps = 4/277 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L K+ ++FT +E+ IA FL N ++ + +R++AK+ S S++ + +K+G Sbjct: 1 MSILVKLREN-NDFTSSEKDIAKFLMNNYKNIKKIDARKIAKETFTSVSAVTRTCKKIGL 59 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF E ++ LI E + ++ ++S I ++ +I KLN+ +L++T L Sbjct: 60 RGFQEFKIDLIEELANLEQQK---LEFVNSDIERNNDTRMIIEKLNKLSISSLKETKLLQ 116 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D + K++++I K I G+G S +V D +K M+IG +Q + Sbjct: 117 DPDIIDKVVKLIKKKKVIDFYGIGASHIVCLDAQYKFMRIGKVCNAFGPFDLQYIQAVNS 176 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 ++ I ISYSG ++I+ +E R +G ++IT + + A+ L S E+ Sbjct: 177 TDDNLAIIISYSGMTEDIIKISEVLRNKGIETVSITMYGSNKVASNANHNLYVTSKESLK 236 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRS 277 RS+++ +R + ++ D++++ +N E I + Sbjct: 237 RSAAIYSRISMLNLIDVIYLKYSNMNFDEVSVKINET 273 >UniRef50_D0XGH5 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XGH5_VIBHA Length = 296 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 66/283 (23%), Positives = 131/283 (46%), Gaps = 9/283 (3%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSV-SSRQMAKQLGISQSSIVKFAQKLGAQ 61 + I T EQ IA+ +Q S +++A++LG+S + IVK ++KLG Sbjct: 20 VIPNIRMRMPSLTRTEQSIAENFLK-PHFMQKSTSIKEVAERLGVSTALIVKVSKKLGFS 78 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF +L+ AL + ++ + + DDS E I K+ + AL + +D Sbjct: 79 GFKQLKDALNAHH-------HSDSYAPSEQLQPDDSCEQIVTKVLQNSINALTEILNFVD 131 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + E I A I++ GGS ++ D KL++ G R + D H+ + L Sbjct: 132 ANMVSAAAEAIINARNIELYAAGGSNIICEDFQHKLLRFGIRASVPRDRHLMLMSASVLS 191 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 + DV + +S+SG +++ A++ GAT+I+IT+ + L +L+ + L + Sbjct: 192 EKDVVLVVSHSGQTVDLMDAVRLAKQSGATIISITNNFHAELSQLSDYPLYAPASPEPLL 251 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 + R + ++ D L+ + ++ + ++++++ L Sbjct: 252 GKNGIARLVKLAMIDSLYATIASKIPDQAEENLEKTTKAVAIL 294 >UniRef50_B7C842 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C842_9FIRM Length = 276 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 66/284 (23%), Positives = 127/284 (44%), Gaps = 9/284 (3%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + L I + F ++E+KIAD++ + E+ +++ +Q+A+ SQ+S+ +FA+K Sbjct: 1 MILDTIHGHYNSFFDSEKKIADYIIQHPKEVVNMTIKQLAQACNTSQASVSRFARKCQMD 60 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 F L++ L + E+ + T S + + K L T +D Sbjct: 61 SFHHLKVNLARDCVNEIEQKSNTI--------STSDISGSLETILSNKISELTATIRNID 112 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + I+ +I A + + +G + V D FK +IG Q + + L Sbjct: 113 VDQFSVILSLIQNAKHVLVCAVGNTVPVALDCMFKFNEIGILTFTSTIWENQVSYALGLD 172 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV IAIS SG +++ + +K+G I IT+ DS + + + + T + E + Sbjct: 173 SNDVVIAISNSGESSQVLAVCKEMKKRGVPTIGITNNEDSVVAKECVYHIQTSTREKLFL 232 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + +R + ++ ++L++ L +D S I + EL LK Sbjct: 233 NEFCFSRISAATIIEILYLFLTNASD-NSYDRISQCEELYASLK 275 >UniRef50_C6VMT8 Transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VMT8_LACPJ Length = 282 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 73/286 (25%), Positives = 127/286 (44%), Gaps = 11/286 (3%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L I N F++ EQKI ++ + + + +S+ ++A G+S +++ +F + L Sbjct: 3 SVLFTIHNRLENFSKAEQKIGRYILDHTNAVIKMSTAELAAATGVSTATVARFGKTLIPD 62 Query: 62 G-FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 G + L++ L E + + L+ I DSL+ I KL +++T L Sbjct: 63 GGYPALKLRLSAESTVDQ--------TLYDEINPKDSLDAIKSKLALRITHTIDETNRSL 114 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D A LQ ++I+ + + GLG S +V D K ++IG V D H+ A Sbjct: 115 DDAALQAASQLIADKASVYVYGLGASNVVATDFEQKFIRIGKAVIHSQDPHLLAVGMTTQ 174 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 ++ V + IS SG K E + A A VI ++ S L +LA L E Sbjct: 175 RQNVVLLLISNSGEKSESIRLANLAHSINVPVIVLSRNATSTLGKLADIILINDDSEENQ 234 Query: 241 --RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 R+++ ++ AQ V DLL+ + + +K + S E + Sbjct: 235 TARAAATTSLMAQLYVVDLLYYTFITNDYERHIKQLVASREAIKEN 280 >UniRef50_C2L0R5 Possible transcriptional regulator RpiR n=1 Tax=Oribacterium sinus F0268 RepID=C2L0R5_9FIRM Length = 314 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 65/278 (23%), Positives = 136/278 (48%), Gaps = 6/278 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + +I + + E QKIAD+L + + ++A++ G+S +S+ +F + +G + Sbjct: 27 SVIPEIKSLYPQMNEAMQKIADYLIDTEDKKCVERASELARRSGVSTASVSRFVKMMGYK 86 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 F + R+ ++ E + + IT D I + + + LE+T +LD Sbjct: 87 EFRDFRLKIVMEKQEENRQEENELNYNGEPITGD--AHSICKTIFSKSVRELEETWGILD 144 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + +Q + ++I +A I + G+G S + L +L +IGY + +D H ++ ++ Sbjct: 145 FDTMQTVADLIHEARRIVVIGVGRSKVTMEALYSRLYRIGYPIMMFSDAHEIVNITSIME 204 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 K D+ I +S G K +V A A+K+G V+ I+S+ +SPL +++ +TL + + Sbjct: 205 KKDILICVSNFGQSKSVVEGARRAKKRGIQVVGISSIKESPLAKISDYTLFSAYDYNNAQ 264 Query: 242 SSSM----STRTAQNSVTDLLFVGLVQLNDVESLKMIQ 275 ++ S AQ + D L++ + N +++ + Sbjct: 265 DGNLFDPSSENLAQLVIVDCLYMLVAHKNKRKNITYFK 302 >UniRef50_B9NXN7 Bifunctional protein glk n=2 Tax=Rhodobacteraceae RepID=B9NXN7_9RHOB Length = 320 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 67/275 (24%), Positives = 133/275 (48%), Gaps = 8/275 (2%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 + + N+ ++ EQK+AD+++ +++E+ S++ +A++ +S+ ++V+F + LG +G Sbjct: 34 LIPALHNSQTKLAVQEQKVADYVKDHLNEISSMTIGNLAERCSVSKPTVVRFCRSLGCEG 93 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 F + ++ L + S + L+ ++ S D+ I + L L+ +D Sbjct: 94 FRDFKLRLAQNVAVSAQY-----LYRNAGDESSDANSAIDQVLGALFA-TLDVMRGQIDT 147 Query: 123 ARLQKIIEVISKAPFIQITGL-GGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 RL++ + I G+ GGS+LV ++ S + ++G D++V + AL Sbjct: 148 ERLEEARDACLDRRQILFAGIGGGSSLVAQEASNRFFRLGIPSFFVNDSYVLQMRAAALG 207 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV +S SG IV AE A GAT I+IT ++ L ++ L T E Sbjct: 208 LEDVLFLVSASGEADAIVSAAEVANGYGATTISITK-PNTRLSDISKIALLTELPEDSDI 266 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQR 276 ++R A ++ D L + + Q E+ + ++R Sbjct: 267 YKPTASRYAHLAIVDALAMTVAQEMTDETKENLRR 301 >UniRef50_Q5WK55 RpiR family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WK55_BACSK Length = 268 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 68/283 (24%), Positives = 135/283 (47%), Gaps = 20/283 (7%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 L +I + E++IAD++ + EL ++ + +A + +S ++I +F +K+GA Sbjct: 4 MLQQIQVNYHALSAAEKRIADYVMSAPEELANIHIKDLAAKCSVSVATITRFCRKVGAAN 63 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 F E +M+ + SI +++ + ++ + + + L++ Sbjct: 64 FVEFKMS------------------VRDSIRTEEEGGELIAEMESIYKAIIGGSRELINQ 105 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 + + ++ A I+I G+G S L G+++ F+LM++G RV C D+H + L Sbjct: 106 DDIVQAATLLENANRIEIYGIGSSGLSGQEMKFRLMRMGMRVDCHIDSHTMVMNASLLTA 165 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 DV +AIS SG +I A++ GATVI +T+ +PL +A L + S + + Sbjct: 166 ADVVLAISNSGHTVDIQEAVALAKENGATVILLTNHEHTPLSEMADLLLLSFSPKPFYAR 225 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 ++ + + V DL+ LV + E K +++ +LK Sbjct: 226 GFLNAQLSIVHVLDLI--SLVLAQNEERAKARRKTLHALSQLK 266 >UniRef50_A6LRG7 Transcriptional regulator, RpiR family n=2 Tax=Firmicutes RepID=A6LRG7_CLOB8 Length = 291 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 67/284 (23%), Positives = 141/284 (49%), Gaps = 8/284 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L KI E E+KIAD++ N + ++ ++A + +S+++IV+F +K + Sbjct: 15 SVLDKILCIYKSLHEAEKKIADYIINNKERVIEMTVSELALESSVSEATIVRFCKKCDLK 74 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF +L++ + E N + ++ + + S++ ++ + + + K L+QT ++++ Sbjct: 75 GFYDLKIKIAKEM------VNLKSSNISNELDSNNIMQSL-QNILANKIEELKQTISMMN 127 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 +++I+E I A +Q +G + V D ++K ++G Q S L Sbjct: 128 EGNIKRILEAIKGARIVQFAAVGNTIPVAMDGAYKFNQLGISSVTNTIWETQLAFSYTLT 187 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 K DV I IS SG+ KE+V E A ++ AT I+IT+ +SP+ + + ++T + E + Sbjct: 188 KEDVVIVISNSGASKELVALLEIANERQATTISITNHENSPVANKSKYHINTSTREKLFL 247 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +R + V ++L++ L+ + ++ I + + K Sbjct: 248 DEFSFSRVSAMVVIEILYL-LLTRDKEDAYNWISQHEQSIAEGK 290 >UniRef50_A8UCF8 Phosphosugar-binding transcriptional regulator, RpiR family protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UCF8_9LACT Length = 283 Score = 213 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 65/285 (22%), Positives = 139/285 (48%), Gaps = 9/285 (3%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L +I + + +E+KI +++ E +++ Q+ + +++++ ++G Sbjct: 5 NILGRIKSVLDDLPNSERKIGEYILTYPEETIKMTTSQLGIAAESNSTAVIRLCNRIGVN 64 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GFT+L++ L E + E ++ I +++++ I KL ++E+T +L++ Sbjct: 65 GFTKLKVNLSAEIVSVDESG-------YAEIEAEETIGTIKNKLLTNAFKSMEETISLMN 117 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 ++++IE+I A + + G+G S ++ ++ K ++G V C D H ++ A Sbjct: 118 EFDIERVIELIESASMVYVYGVGNSRIIAENMVQKWSRVGKIVICPTDNHQLVSMLGAAP 177 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTV-SGETEW 240 K + IS SG +EI+ + A+K + +T + L A +T+ TV + E++ Sbjct: 178 KNALFFGISNSGETREIIELIKLAKKCSLKTVGLTQFGQNSLTNKADYTIQTVKTIESDS 237 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + S S+ AQ D+LF + N V + I++S E + K Sbjct: 238 QFIS-SSLHAQLIAIDVLFYSFLSKNYVAGTERIKQSREEMNQYK 281 >UniRef50_A6D304 DNA-binding transcriptional repressor RpiR n=1 Tax=Vibrio shilonii AK1 RepID=A6D304_9VIBR Length = 289 Score = 213 bits (544), Expect = 5e-54, Method: Composition-based stats. Identities = 68/283 (24%), Positives = 135/283 (47%), Gaps = 9/283 (3%) Query: 3 YLTKISNAGSEFTENEQKIAD-FLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + I T+ EQ IA+ FLQ + + +S S ++A++L +S + IVK ++KLG Sbjct: 13 VIPNIRMMMPSLTKTEQSIAENFLQPHFLQ-KSTSINEVAERLSVSPALIVKVSKKLGFS 71 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF +L+ +L ++ + + DDS E I K+ + AL + +D Sbjct: 72 GFKQLKESLYA-------QSETQSYAPSERLLPDDSAEKIVSKVLQNSINALTEILNFVD 124 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + + E + KA I++ +GGS+++ D KL++IG + + D H+ + + Sbjct: 125 VSMVDAAAEALLKARNIELFAVGGSSIICEDFQHKLLRIGIKSSVPKDRHLMLMSASIMT 184 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV + +S+SG +++ A++ GATVI+IT+ + L L+ L + Sbjct: 185 DQDVVLVVSHSGQTVDLMDAVRQAKQSGATVISITNNYHAELSSLSDIPLYAPASPEPVL 244 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 + + R + ++ D L+ + + + + ++ +RL Sbjct: 245 GKNGTARLVKLAMIDSLYATMASKMPSLAEESLSKTIRAVERL 287 >UniRef50_C2KD15 RpiR family transcriptional regulator n=3 Tax=Lactobacillus crispatus RepID=C2KD15_9LACO Length = 279 Score = 213 bits (544), Expect = 5e-54, Method: Composition-based stats. Identities = 73/284 (25%), Positives = 141/284 (49%), Gaps = 10/284 (3%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M +LT + N + + E+KIA F+ + +QS + Q+A + +S ++I +FA+++ Sbjct: 1 MTFLTDLQNRLPDLPQQERKIALFILQDPQFIQSANINQLASTIKVSNATITRFARRVNC 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 FT+L++ L ++S+ T IT+ D+ + A ++ L +T L Sbjct: 61 SSFTDLKVKLAAAAASSQVNT----------ITNQDNSKTTAHQVYDFYNRVLSETQNKL 110 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D +L+KII++I A + G+G S + + +L+++G E +++ S + Sbjct: 111 DIKQLKKIIQLIKSAKRVYFYGIGSSGYTSLEATQRLLRMGISAFAETESNNMFMTSSII 170 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 K D+ IAIS +GS +V E A+K ATV+A+TS +SPL +LA + Sbjct: 171 SKDDLIIAISSTGSTDSLVRAIELAKKNKATVVALTSYDNSPLAQLADIVVGVQDTNYIN 230 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 + ++++ + V D++ L++ N +S L ++ Sbjct: 231 DARFINSQFSIMYVIDVITTLLLKNNKYHDRMTRTITSVLNEKY 274 >UniRef50_B9Y4T6 Putative uncharacterized protein n=2 Tax=Holdemania filiformis DSM 12042 RepID=B9Y4T6_9FIRM Length = 277 Score = 213 bits (542), Expect = 8e-54, Method: Composition-based stats. Identities = 78/281 (27%), Positives = 137/281 (48%), Gaps = 9/281 (3%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 +Y K+ +E T+ E+ IADF Q + E +S +S Q+A +L I QS+I++F++KLG + Sbjct: 1 MYQEKLKQVQNELTQTEKIIADFFQNHSLEARSFTSYQLADRLNIGQSTIIRFSKKLGYR 60 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 F EL L T+ T + I ++ +K+ ++ + + T Sbjct: 61 SFRELLEDL---------STSLTEEKVKEEIVVNEGTSSTNQKIIQQYQKMAQLTLEFNP 111 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + + + + KA I + G G S L +S + +K+G C A++H+ ++ Sbjct: 112 PQVIDQTVSALKKARKIIVFGFGNSNLFAEYISNQWLKMGLDSFCSANSHIIFSMLSQFG 171 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV IS SG EI+ A A Q TVIA+T + + L + L TV+ ET R Sbjct: 172 PQDVLFLISESGETPEILKAARIAGHQNVTVIAMTRIQKNRLHGYSDIVLKTVNYETNTR 231 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 ++M+ R +Q + D++++ L + + K+I S +L Sbjct: 232 LNAMTLRCSQLCLLDMIYLNLYKTDFEHYEKIIAESEKLLD 272 >UniRef50_A6UGP6 Transcriptional regulator, RpiR family n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6UGP6_SINMW Length = 284 Score = 212 bits (541), Expect = 9e-54, Method: Composition-based stats. Identities = 75/277 (27%), Positives = 137/277 (49%), Gaps = 11/277 (3%) Query: 5 TKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFT 64 +++ + + ++ E+++A ++ NV S +A+ +S +++++ + G +GFT Sbjct: 14 SRLRSVLPKLSDAERRVALWMLKNVDLSIRQSMSAIAQATDVSDTTVLRMCRTAGFEGFT 73 Query: 65 ELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYAR 124 +L++AL E + E HSS + S A +L R AL T +LD A Sbjct: 74 DLKLALAQEPREAIE---------HSSGEPEASALQAAGRLFRAITQALNDTFGVLDEAT 124 Query: 125 LQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD 184 K +++++ A I + G+GGS +V + + +++G R D+ +Q + GD Sbjct: 125 FAKALDLVANAKHIMVGGVGGSGIVAQAFYQRCIRLGLRCDAPIDSQLQIMHAALTGPGD 184 Query: 185 VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSS 244 + +AISYSG + VL + A+ +GA+ + IT + S L RLA L +VS E S Sbjct: 185 LVVAISYSGITSDPVLVLQEAKARGASTLCITGNSSSALARLADVVLVSVSHEQG--SEP 242 Query: 245 MSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 M+ + AQ ++ D L+ LV N + +R Sbjct: 243 MAAQIAQMTLVDALYAALVARNPEPAQLTEERMVNAI 279 >UniRef50_C3RM35 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RM35_9MOLU Length = 284 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 60/275 (21%), Positives = 131/275 (47%), Gaps = 3/275 (1%) Query: 10 AGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMA 69 + F+ E+ + ++ N ++ ++S++++AK S +SIV+F +KL +G+ + ++A Sbjct: 1 MANNFSSVERILGKYVLENGEKVLNMSTKELAKATFTSPASIVRFCRKLEYEGYNDFKIA 60 Query: 70 LIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKII 129 L + SR + ++ + DS+ +A + + +++ T LD L+ ++ Sbjct: 61 LAAQLQYSRLSNDD--INANYPFKGTDSVYTVASNIANLSKESIDITMKNLDLEELRLVV 118 Query: 130 EVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAI 189 +I+KA I I G+ G + D +K+ +IG V + Q + + I I Sbjct: 119 LMITKAKVIDIYGVSGPLRIASDFQYKMFRIGKDVRISQMINEQLFQAAQSTSEHLAILI 178 Query: 190 SYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW-RSSSMSTR 248 SYSG +E++ A+ ++ IAITS ++ L + L S E + + ++ S+ Sbjct: 179 SYSGETEEVIEAAKILYRRKIPAIAITSFGENRLVKYTQRVLYLNSSEFIYSKIATFSST 238 Query: 249 TAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 + + + D+++ + N ++L + L Sbjct: 239 LSLHLLLDIIYGCVFSKNYEDNLNYKIETDNLIDH 273 >UniRef50_C8P0W4 RpiR family phosphosugar-binding transcriptional regulator n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P0W4_ERYRH Length = 285 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 128/278 (46%), Gaps = 4/278 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 ML + +I N+ ++ ++ E KIA ++ N + ++ ++++ S S+I +F +K+ Sbjct: 1 MLLINRIKNS-TQLSDTESKIAQYILENPQLVTQLTIHELSEITYASASTITRFCRKMKT 59 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF++ ++ L GE S+ N + S+ + I + + ++ T + Sbjct: 60 EGFSDFKVKLAGELSSFSITENRIRDDV--PFQSNHTSTEIVQSILSLNYQSMSDTYNNI 117 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D +L++I I AP I + G G S ++ +D +KL +I E Q+ + Sbjct: 118 DLEQLERIAHKIYYAPHIYLYGSGQSLILAQDFQYKLFRIELDCNLETSLGFQSLKANTQ 177 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETE- 239 + + ISY G + ++ ++ I IT ++PL A + E Sbjct: 178 PLDSIALIISYYGQNEHNKTIVDSLVERNIPYILITGPLNNPLCTHASEVVHVSPQEELV 237 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRS 277 + +S S+RT+ V D ++ + ++ ++ K+I++ Sbjct: 238 TKMASFSSRTSMQLVLDFIYALIFAIDYEKNQKIIEKH 275 >UniRef50_C3RI81 Sugar isomerase n=1 Tax=Mollicutes bacterium D7 RepID=C3RI81_9MOLU Length = 296 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 64/286 (22%), Positives = 131/286 (45%), Gaps = 4/286 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 ML + K+ N + ++ E+ IA F+ EL S+R +A+ S +++++ +KL Sbjct: 1 MLIIEKL-NLKEKMSDGEESIAAFILTLGKELHKYSTRNIAEATLTSPATVIRLCKKLDF 59 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF + + + E + ++ + + +D++ A K++ E + T LL Sbjct: 60 KGFDDFKEQFLKEINYLDQQY--GKVDANFPFNRNDTMMKTAHKISHLYEDTVTDTMTLL 117 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + LQK + ++ + I I G + + K++KIG V + + Q + Sbjct: 118 HHDDLQKALRLLKNSNSIHIFSTGTALNLAESFKEKMLKIGKNVVISNNLNYQLYEVSCI 177 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 KGD+ I ISYSG + A+ + +IAITS ++ L +LA L + E+ + Sbjct: 178 PKGDIAIIISYSGETINTIKIAQTCKNNKIPIIAITSFGENTLAKLASCKLTISTKESLY 237 Query: 241 RS-SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + ST A + + D+L+ + ++ + ++ + L+ Sbjct: 238 HNLGDFSTHLATHLMLDILYSVFFLEDYDQNYDNKIKITKDLEALR 283 >UniRef50_B7X566 Transcriptional regulator, RpiR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X566_COMTE Length = 282 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 66/282 (23%), Positives = 127/282 (45%), Gaps = 13/282 (4%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 L ++ T E+++ + N S+S+ ++A + +SQ ++V+F + LG G Sbjct: 1 MLDQVMATLETLTPAEKRVGKLVIENPRRFASMSTSEIASECFVSQPTVVRFCKGLGYGG 60 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 T+ + L G+ S ++HSS+ + D+ +A K+ L + Sbjct: 61 LTQFKQKLRGDRS-------DGVPYVHSSVDAGDTSFNVALKVVDSSIATLALFRTYVPK 113 Query: 123 ARLQKIIEVISKA----PFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQ 178 +++ ++ A + G G S +V +D + ++G+ D + Q + Sbjct: 114 ISIERASNTLAAAYSEQRSLSFYGSGHSGVVAQDAQLRFSRLGFNSTALNDGYSQVLNAA 173 Query: 179 ALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGET 238 + K+GDV +A+S SG KE++ + A++QGATVIA+T +PL + L T E Sbjct: 174 SRKEGDVVVALSCSGRTKELLESVDVAKRQGATVIAVTGSG-TPLATMGSIHLATDHLED 232 Query: 239 EWRSSSMSTRTAQNSVTDLLFVGLV-QLNDVESLKMIQRSSE 279 R MS+R V D++ + Q+ ++R+ Sbjct: 233 IDRYLPMSSRLLHLVVIDIVATAVALQIGCGRLQDQLERTQN 274 >UniRef50_C0D858 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D858_9CLOT Length = 275 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 72/269 (26%), Positives = 124/269 (46%), Gaps = 12/269 (4%) Query: 6 KISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTE 65 K+ E++ A++L + + ++ +AK+ +S++++V+ K+G G E Sbjct: 12 KLRGVIGSLGAQERRFAEYLLNSFAGIEKEPIAVLAKEAQVSEATVVRVCHKMGYSGLKE 71 Query: 66 LRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARL 125 L++ + E N TA I ++ + ++ AL+ T L+D + Sbjct: 72 LKIVVARE--------NETAGSFDGGI-GGQYMDELKERVFMGAIRALQDTMNLIDEDEV 122 Query: 126 QKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDV 185 +K +V+ A +I I G+GGS V R L +LMK+G + ++ KGDV Sbjct: 123 EKATKVLCNANYISIYGVGGSVPVARSLKHQLMKLGIPSNVYNEFQPTIIAAEKYNKGDV 182 Query: 186 QIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSM 245 I IS+SG ++V AR +GAT I ITS DS + + T S ET Sbjct: 183 AIGISHSGESSQVVEALRIARGKGATTICITSYGDSAITHCSDVKFFTTS-ETLLNGGDN 241 Query: 246 S-TRTAQNSVTDLLFVGLV-QLNDVESLK 272 S R AQ S+ +LL++ + + N + Sbjct: 242 SLARIAQTSIINLLYLNVALKYNRYHNTD 270 >UniRef50_A8RCR9 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RCR9_9FIRM Length = 289 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 64/286 (22%), Positives = 135/286 (47%), Gaps = 10/286 (3%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 LT+I + +++EQK+ +++ + ++ +S+ +++ IS+ ++++F ++LG QG Sbjct: 6 ILTRIESLMPFLSKSEQKLGNYILTHPKDVTDMSTSALSQACDISEPTLIRFTRRLGFQG 65 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 + + ++ L + +++ + ++L +DS I RKL +L T LD Sbjct: 66 YKDFKLHLSANFISNQIDSTPVKVNL------NDSAIEIYRKLASFTINSLNSTLNTLDA 119 Query: 123 ARLQKIIEVISKA----PFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQ 178 L+ I A I ++G+G S ++ + K+M++ + D H++ Sbjct: 120 NDLENATNYIYVAAKQNRKIFLSGMGASTVLIHEFQIKMMRLNIQTIFFEDIHLRLEACA 179 Query: 179 ALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGET 238 LKK D+ I + G+ KE + A ++ A +I IT +S + A L T E Sbjct: 180 NLKKNDLFICFTTLGASKENYELIDIAHERKAKIIVITQFGNSQIAEKADIALYTSIIEN 239 Query: 239 EWRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 R +S ++ Q+ V D+LF+ + + ++ E ++L Sbjct: 240 NLRLASQTSIILQSMVIDVLFLTIACKDYASITNSVKDFREKFKQL 285 >UniRef50_C7T7Y4 Transcriptional regulator n=8 Tax=Lactobacillus RepID=C7T7Y4_LACRG Length = 315 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 74/283 (26%), Positives = 131/283 (46%), Gaps = 6/283 (2%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 L K+ + + + +AD++ + + ++ Q+A+ G+S +S+++F + Sbjct: 4 LLAKVQAQLPQLSPVNRALADYVLTDAEAFIAQTTAQIARASGVSAASVIRFVRLFDYPD 63 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 ++AL+ + A L + DD L + RKL++ A+ LD Sbjct: 64 LQSFKLALVRDTQA------PALTPLDPLVQDDDDLPTMMRKLSQTAIAAVRDLPDELDQ 117 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 A +Q I + A I + G+ SALV +DL KL++ GY +AD H Sbjct: 118 AAVQTAITTLRHARHIYLVGMSASALVAQDLYLKLIRAGYLAIFDADAHTALERVYYTTA 177 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 D + SYSG KE+VL A+ AR+ VI +T SPLR A + E R Sbjct: 178 ADAVVVFSYSGLTKEVVLAAQQARRNQTPVIVVTRAEPSPLRDAASCVIALPPTEPLLRI 237 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 ++++ + V ++LF+G+V ++ + + +S+LT LK Sbjct: 238 GAVTSMFTETYVANILFLGVVHGEIKQTEQNYRATSQLTGELK 280 >UniRef50_C2C459 RpiR family transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C459_LISGR Length = 284 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 62/274 (22%), Positives = 131/274 (47%), Gaps = 5/274 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + L KI + FT E+ IAD++ AN + ++ ++ +++A++ S +SI++F +KLG Sbjct: 1 MLLQKIKT-MTNFTNTEKVIADYILANTANMEQLTIQELARKTYTSHASIIRFTRKLGLD 59 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF ++ L+ + +E + ++ + DDS+ I+R++ + + ++ LLD Sbjct: 60 GFKSFKIELLK--TNQQENHVLSEINPNIPFEHDDSILKISREMMELTQQTITESYHLLD 117 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 +L + + A I + LG S + KL KI D A + + Sbjct: 118 EQKLFQATRQLYDAKRIFLFALGDSQIRAESFQNKLWKINQYAILATDRSEWAVHTANIT 177 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGE--TE 239 D + ISY + AE + +G +I +TS S L ++A + + E +E Sbjct: 178 SEDCALFISYDAKSPHDITAAEWLKSRGVPIILLTSHITSKLSKIADICIAVPNLEDKSE 237 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKM 273 + ++ +++ A + + +++F L Q++ ++ Sbjct: 238 LKIATFASQIAFDYILNVIFSTLYQIDYEKNKDY 271 >UniRef50_C2LK66 Phosphosugar-binding transcriptional regulator n=4 Tax=Enterobacteriaceae RepID=C2LK66_PROMI Length = 283 Score = 210 bits (535), Expect = 5e-53, Method: Composition-based stats. Identities = 71/284 (25%), Positives = 144/284 (50%), Gaps = 5/284 (1%) Query: 1 MLYLTK-ISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLG 59 M LTK + N + EQ++A +L N + S+++ ++A++ G+S +S+++F++++G Sbjct: 1 MSTLTKKLENLRLQGKGTEQRLAHYLLENSDNIASMNAAELAQKAGVSSASVIRFSRQMG 60 Query: 60 AQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCAL 119 G+ E ++ +Y + ++ +++ L++++ DS E I K A++ + AL Sbjct: 61 YGGYPEFKI----DYLSEEKQQKSSSDILYANLAKTDSTEQIIAKTGHLFTTAIQDSIAL 116 Query: 120 LDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQA 179 LD A + + E + A I + G+G SA+V D+ KL+++ AD H Q S Sbjct: 117 LDAATIDLLAEKMISAKRIVLFGVGASAIVASDIFHKLIRVNKNTLFSADLHAQLAYSAN 176 Query: 180 LKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETE 239 L D+ IA++ G+ +I +AA+++G +A+T RLA++TL E Sbjct: 177 LSADDLAIAVTARGNTADINRMLKAAKQEGCITVALTRFGQDEATRLANYTLPYFYDEQH 236 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 + ++ + Q D+LF + L + K + + + + Sbjct: 237 SQLGVITPQVLQMVAFDVLFFKYMTLAKGSAEKALLKGRQAVMQ 280 >UniRef50_Q03HW7 Transcriptional regulator n=13 Tax=Lactobacillales RepID=Q03HW7_PEDPA Length = 295 Score = 210 bits (535), Expect = 5e-53, Method: Composition-based stats. Identities = 67/284 (23%), Positives = 135/284 (47%), Gaps = 4/284 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 ML + K+SN FT EQ+IAD++ N++++ ++ +++K S S++V+ +KLG Sbjct: 1 MLLIDKLSNH-ENFTNTEQRIADYILKNITDIPPMNIDKLSKVTYTSHSAVVRLTKKLGF 59 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF + ++A+ + + TN ++ + S+DS+ I++K+ ++++T A L Sbjct: 60 EGFKDFKVAISE--AVYSQTTNMNSVDANFPFDSNDSVSTISKKVAELSVESIQRTFAQL 117 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D +++ I+K+ I + G S + R KL+K+ + + + L Sbjct: 118 DERLIEEAANTIAKSERIFLFAQGDSQIRARSFQNKLVKLNRFAILGEEYSDEDWTAANL 177 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 K D I ISY G + + + +T SPL RLA + T E ++ Sbjct: 178 TKKDCAIFISYGGRISQYERMLTHFSENKIPSVVLTGNQKSPLIRLAQTAIVTTQNEYDF 237 Query: 241 -RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 + S+ S++ + D +F + +++ ++ L QR Sbjct: 238 LKISTFSSQITFEYLLDTIFSVIYAKEYQQNIINLKNKFNLIQR 281 >UniRef50_B9YAK0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAK0_9FIRM Length = 364 Score = 210 bits (534), Expect = 6e-53, Method: Composition-based stats. Identities = 54/283 (19%), Positives = 122/283 (43%), Gaps = 3/283 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M + ++ S T E+ I +++ + +E+ ++ +A++ S+S+I +F +K G Sbjct: 81 MSFFLELQKNHSS-TPVEKSIINYIINHPNEVIEMTMEDLARETYTSRSTISRFCKKNGY 139 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF L+M L E + + +++ L D+ I + + ++ +T Sbjct: 140 EGFNSLKMQLAIELNLFLKDEMSSSTSL--LFEKGDNASSIIDNITSQDTYSIIETVRTN 197 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 ++K+ + I + G+ S ++ D + ++G T S Sbjct: 198 PVEHIEKLADKILNCRHVVFLGVQFSGIIAYDAHLRFSRLGIPCKYFNTECDILTYSYFA 257 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 DV I SYSG I+ A+ R +G + ++T ++ L ++ L S + Sbjct: 258 DPQDVVIIFSYSGKTAVILEAADHIRGKGTFLASVTKNYNNELLEISDLHLYINSIDDPE 317 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 + S+S+R A + D+++ LV + ++++L ++ Sbjct: 318 NNLSLSSRIAALCLVDMIYAVLVNKKSDNFYDKLMQTNKLYKK 360 >UniRef50_Q03FC5 Transcriptional regulator n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03FC5_PEDPA Length = 280 Score = 209 bits (533), Expect = 8e-53, Method: Composition-based stats. Identities = 69/285 (24%), Positives = 129/285 (45%), Gaps = 12/285 (4%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L +SN +F+ +EQK+A F+ E+ +++ +++ + +S +++V+ A+K+ Sbjct: 3 NILFTLSNDFEKFSRSEQKVARFMIDYPREVIQMNAEEISDRTQVSPATVVRLAKKICKS 62 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G L++ + E L++ + D L+V+ KL A+ QT +L Sbjct: 63 GLPGLKIQVASEIK--------VDDSLYTEVNPSDDLDVMKHKLEFRISHAIGQTNQILL 114 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 ++K +++ +A I + G+G S LV D K ++IG V DTH+ A K Sbjct: 115 KNDVKKATDIVEQADDIYVFGMGASNLVAEDFQQKFIRIGKSVIQTLDTHLMAV--GLAK 172 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSG--ETE 239 V I +S SG KE A +IAIT +S + + + TL G Sbjct: 173 PNSVLIVVSDSGETKESCHITRVASSLNIPIIAITHERNSTIAKNSTVTLTHDDGGESGV 232 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 R+++ ++ AQ V DLL+ + + + + +S + Sbjct: 233 LRTAATTSLLAQLYVVDLLYYAYLTQDFSNNKARLVKSKTIIAEN 277 >UniRef50_A9BEU1 Transcriptional regulator, RpiR family n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEU1_PETMO Length = 269 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 57/280 (20%), Positives = 123/280 (43%), Gaps = 15/280 (5%) Query: 5 TKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFT 64 +KI + T E++ A ++ ++ S +++ G S+++I + +K+G G+ Sbjct: 4 SKIKGIYNSLTNKEKQAAQYIIERPGDVIHYSITELSNWAGTSETTIYRVLKKVGYSGYQ 63 Query: 65 ELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYAR 124 + ++ L E S + + + + + AL +D + Sbjct: 64 KFKLELARELSTPTLDSKES--------------KDLFDMIYNRTVNALTDILRQVDRDK 109 Query: 125 LQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD 184 + E+I + + +G S + D S K +G+ +D H+Q V+ L+K D Sbjct: 110 ITHASEIIMNSKKLLFYAVGRSFPIALDASLKFAALGFASTAYSDPHMQVIVASNLEKDD 169 Query: 185 VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSS 244 V IAIS+SG ++ A+ A++ GA I +T+ +SPL ++ + L T + E S Sbjct: 170 VVIAISHSGVIRDTYKSAQVAKEAGAFTIGMTAGVNSPLSKIVNLVLYTSA-EMPQESEF 228 Query: 245 MSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 +R + + +LL+ + +++ + + T++ Sbjct: 229 TVSRIGEMFMVELLYNSVASKMSLKNKESRISQAMKTKKF 268 >UniRef50_A9WVK2 Transcriptional regulator, RpiR family n=2 Tax=Micrococcineae RepID=A9WVK2_RENSM Length = 346 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 53/247 (21%), Positives = 110/247 (44%), Gaps = 1/247 (0%) Query: 5 TKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFT 64 ++ E + KIA +L +S +++A + G S +++ +F + +G G+ Sbjct: 39 NRLKAQLPEMSGAMSKIARYLIEKPLAPLELSIKELADETGTSAATVTRFCRLIGYTGYA 98 Query: 65 ELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYAR 124 R+ + + S + + + + DDS + L +L++T A+LD Sbjct: 99 PFRVGVASDLGRSDAR-ESWKTDIGRAFGPDDSPRDVLSTLMNAHARSLQETAAVLDLRL 157 Query: 125 LQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD 184 ++ + I+ + + I G+GGSA++ ++L +L +IG + + T + Sbjct: 158 MKNLARRIALSEHVDIYGIGGSAVMAKELQNRLYRIGIPCHHCTEVYAGLTSASLQNSQC 217 Query: 185 VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSS 244 + I IS +G +E + A GAT +A+++ +S L A F + T E + Sbjct: 218 IAIGISNTGRTEETIQMLRQAGLAGATTVALSNNPNSTLAESADFQITTSVHEQFLQPDD 277 Query: 245 MSTRTAQ 251 +S + Q Sbjct: 278 LSAKHVQ 284 >UniRef50_C7TGD6 Transcriptional regulator, RpiR family n=3 Tax=Lactobacillus rhamnosus RepID=C7TGD6_LACRL Length = 277 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 65/282 (23%), Positives = 143/282 (50%), Gaps = 10/282 (3%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + ++I+ S E +++AD+ + N +++ + S R ++ ++G+S ++I +FA++LG Sbjct: 3 TFDSRIAQVYSALGEASRQVADYFRHNYAKVANSSLRNLSDKIGVSTATISRFARQLGFA 62 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 F +L++AL+ E + + + ++D+ ARK ALE T + L Sbjct: 63 SFDQLKLALLKEIDNT----------TNGDVETNDNSLASARKTVNANIAALEGTLSFLT 112 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 ++ + ++ A + + GLG S ++ + +++ + + D H+Q + L Sbjct: 113 QDQIDHSVNLLLDANKVALFGLGSSNVIAKAAYHTFLRLPLTLIADNDYHMQLMSANKLT 172 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 + DV I IS++G+ +I+ + +IA+TS SPL + ++S +T +R Sbjct: 173 EHDVAIVISHTGNDTDILALVDLLSAHQVPIIAVTSYATSPLAKRVSDVFFSISEDTRYR 232 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 S ++ + T+Q ++ D+L+ LV+ ++S K I + + Sbjct: 233 SDALISMTSQLAIFDVLYTELVRRMGLQSEKTIALVHQAVAQ 274 >UniRef50_Q71VW8 Phosphosugar-binding transcriptional regulator, RpiR family n=15 Tax=Firmicutes RepID=Q71VW8_LISMF Length = 268 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 54/281 (19%), Positives = 130/281 (46%), Gaps = 18/281 (6%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L +I + E++IA ++ EL++++ +++A++ G S S+I +F + + Sbjct: 1 MTILNEIQQNYNRLPNKEKQIAKYILEKSDELKNINIKELAEETGTSISTITRFCRHVRC 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 F +L+M ++ +++ + + ++ ++ T L+ Sbjct: 61 DSFVDLKMR----------------VNTAATMVPSLGYDDLFEEVYSFYHKVIDNTVKLI 104 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + A+++++++ I +A + I G+G S L ++S +L+++G V D H+ S Sbjct: 105 EPAKIREVVQYIQEAKRVYICGVGSSGLTAVEMSQRLIRMGLNVISVNDPHMMIITSSIT 164 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 K D I IS SG+ E+V + A+K + V TS +S + ++ T+ + Sbjct: 165 TKEDFVIGISNSGNTPELVTALKIAKKNKSKVATFTSFENSEMTEISDVTIPVYNTLFVS 224 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 + +++ + V D++ + L+Q + ++++ Sbjct: 225 KRYFANSQFSIMYVMDIISMMLLQ--NESYRDNMEKTINTV 263 >UniRef50_C2KAY2 Transcriptional regulator n=6 Tax=Lactobacillus RepID=C2KAY2_9LACO Length = 281 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 72/286 (25%), Positives = 135/286 (47%), Gaps = 7/286 (2%) Query: 1 MLYL-TKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLG 59 ML L KIS+ + + IAD + + +++ S +S+V+F + LG Sbjct: 1 MLNLANKISDVYPNLNKTSKLIADVYFKEPRIFLNKNLQELGTITQTSGASVVRFCRNLG 60 Query: 60 AQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCAL 119 +GF + ++A ++E N + + I ++D + KL + Sbjct: 61 FKGFKDFQIA------CAQEMPNKQDAMVDTIINTNDEPTSVLYKLQLSLGKNIADIGKT 114 Query: 120 LDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQA 179 +D+ L ++++ A I + G G S L +DL +KL++ G V +H+ Sbjct: 115 IDHKSLDAAVDLMRSAQQIYVAGEGASGLAAQDLFYKLIRSGKNVNFVQSSHIALEQVAN 174 Query: 180 LKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETE 239 + K D+ I SYSG +E +L A+ A+K A ++A+T + DSPL+ +A + S E Sbjct: 175 INKEDILIVFSYSGLTQEPLLMAKQAQKNNAKIVAVTRIQDSPLKNMADTVITLPSNEKL 234 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 R ++++ A+ + LL++ L+ N E ++ + LT +LK Sbjct: 235 LRYGAINSLFAEIFASSLLYLSLISPNLEELNMKMKTTQNLTNQLK 280 >UniRef50_Q4L9T6 Similar to transcriptional regulator n=2 Tax=Staphylococcus RepID=Q4L9T6_STAHJ Length = 268 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 126/281 (44%), Gaps = 19/281 (6%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M + +I + T+ ++KI +++Q + + + +A +G S ++I +F+ KL Sbjct: 1 MKFENRIQRSRHVLTKMDKKIIEYIQTHELDENFSTINSLAYAIGTSPATITRFSGKLNY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 F +++ L E S + + + ++R + ++QT + Sbjct: 61 ANFQDMKFNLQHEKSEKVVENAP-----------------LVQLIHRYHQNIIQQTGEFI 103 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 +++++ + + GLG S L + ++ M++G + + D H + L Sbjct: 104 SEEKIKRLAHNLKTCRQVNFAGLGSSGLTASEFYYRTMRMGIKGSVSTDAHQMKISASLL 163 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 D+ +AIS SG E++ A+ AR QGA V+ IT+ S L + A L T + + Sbjct: 164 SSRDMFVAISNSGETLELIEAAKIARNQGAYVVVITNFEGSALTKNADLVLITTAQSSNN 223 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 S ++++ A + D+ V + LND + Q++ ++ Sbjct: 224 DSKFINSQIATLFLLDI--VSYLLLNDTHMHHVYQQTRDVI 262 >UniRef50_UPI00019054B9 hypothetical protein RetlB5_21050 n=1 Tax=Rhizobium etli Brasil 5 RepID=UPI00019054B9 Length = 259 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 76/269 (28%), Positives = 135/269 (50%), Gaps = 14/269 (5%) Query: 14 FTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGE 73 T +K+A F+ A+ + S ++A++ S++S+++F ++LG QGF ++AL E Sbjct: 1 MTRALEKVAAFVLADPQTVLYKSITELAEEAESSEASVIRFCRELGYQGFQNFKLALAHE 60 Query: 74 YSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVIS 133 + ++ T + + + ++L ALE+T LLD +Q++ ++ Sbjct: 61 LATLQQPTAS-------------APGDMVQELVETARTALEETERLLDRDAIQRVSSLLL 107 Query: 134 KAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSG 193 A I+I G+ SA+ + L +KL ++G + D+H+ S D+ I IS SG Sbjct: 108 DARHIEIFGVAASAITAQYLEYKLARLGIQAHIPRDSHLATMASATASADDLYILISSSG 167 Query: 194 SKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNS 253 S + + AE+A +GA VIAIT+ T SPL + F L S ET + ++ +Q Sbjct: 168 STIDTLRVAESAHARGAKVIAITNRTKSPLAAICDFKLLASSPETPLTGGAFPSKISQLL 227 Query: 254 VTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 + D L + +L D LK I+ ++E Sbjct: 228 IVDALANTITKL-DPARLKTIKETAESVS 255 >UniRef50_C7XVK6 6-phospho 3-hexuloisomerase n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XVK6_9LACO Length = 280 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 58/282 (20%), Positives = 131/282 (46%), Gaps = 17/282 (6%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 + ++ N E+K+A ++ ++ ++A Q G+ +++ +F +++G + F Sbjct: 1 MEQVQNLFINLPRQEKKVARVTLQKPELVRRMNITELANQAGVGVATVSRFTKRVGCKNF 60 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 + ++AL+ + RE + T +D ++ + L +T A++ Sbjct: 61 ADFKLALVTPDTMQRESEQNVS-------TPND--------IHNYYQKILAETMAMVSTK 105 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 +L++ +I A + + G+G S ++ + +LM++G ++++ S ++ Sbjct: 106 QLRQAANLIHGAKRVYVFGIGSSGYNAQEFAQRLMRMGKPAFAMTESNMMTIASATMQDN 165 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 D+ IA+S SGS E+ +RK GAT+IA+T+ +S L +++ S E Sbjct: 166 DIVIALSVSGSTPEVCSAVRDSRKNGATIIAVTAFKNSLLGKMSDLLFQIKSTELVGDYD 225 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 ++++ A V D+L L+Q D + + ++ E K Sbjct: 226 FINSQFAVTYVIDMLTQMLLQFTDFRAT--MNKTVEAILVTK 265 >UniRef50_C8QBF9 Transcriptional regulator, RpiR family n=1 Tax=Pantoea sp. At-9b RepID=C8QBF9_9ENTR Length = 297 Score = 207 bits (527), Expect = 4e-52, Method: Composition-based stats. Identities = 68/277 (24%), Positives = 121/277 (43%), Gaps = 8/277 (2%) Query: 8 SNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELR 67 E E+ IA F+ N L S+S +A L +S +SI K A+KLG GF +L+ Sbjct: 19 RTLAPELGRKERSIARFIDDNPETLASMSITDIADYLDVSVASITKVAKKLGFTGFHDLK 78 Query: 68 MALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQK 127 M + + S E + + T E I LAL+ +D A ++ Sbjct: 79 MNIGKHITVSEELIDVPPVSGGEFYT-----EKIVESTLYNSILALQDALKAIDIAVVKS 133 Query: 128 IIEVI---SKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD 184 + + S+ I I G GGS + D + KL+KIG + +D+H Q + ++ GD Sbjct: 134 VAALFIHRSENARIVIAGCGGSGSICEDFNHKLLKIGIFSSVFSDSHKQLMTASLMRPGD 193 Query: 185 VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSS 244 + + +S+SG +I+ + A +GA I +T+ +SPL ++ + + + Sbjct: 194 ILLTVSHSGQTTDIINMTKMANDKGAETICLTNYPNSPLSHISRHAIISSVKNNPITGEN 253 Query: 245 MSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 +TR ++ D +F + S + + + Sbjct: 254 ATTRIVHLNILDAIFTIIASKTSEFSQESLHNTRNAV 290 >UniRef50_Q0BBX6 Transcriptional regulator, RpiR family n=65 Tax=Proteobacteria RepID=Q0BBX6_BURCM Length = 324 Score = 206 bits (526), Expect = 5e-52, Method: Composition-based stats. Identities = 66/275 (24%), Positives = 130/275 (47%), Gaps = 9/275 (3%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 + +I+ E E E+K+A ++ A+++ S +A+ G+S +++ +FA+ +G + Sbjct: 39 IVARIAECAPELREAERKVAAYILADLARAAHASIGALARDAGVSVATVTRFAKAVGCRD 98 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 EL++ + + + + H + A + E +AL LL Sbjct: 99 VRELKVLVAQAAAVGQRFLVPSDAHPAEDASP-------ASVVYDEIRVALAHNHQLLRN 151 Query: 123 ARLQKIIEVISKAPFIQITGL-GGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 ++++ A + + G GGS + +L F+L++ G VA D+ +Q V+ L Sbjct: 152 TSFDAAADLLAGAKMVYVYGQGGGSTALADELRFRLVRFGRPVASYQDSLLQRMVAATLS 211 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 + V +A+S SG E++ A++ GAT+IAIT+ SPL +LA + V+ ET++ Sbjct: 212 RDAVVVALSVSGRVPELLESCRLAKRYGATLIAITA-PASPLAKLADHLIPVVAFETDFI 270 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQR 276 ++R A D+L G+ + ++R Sbjct: 271 YKPSTSRYAMMMAIDVLVTGVALRLGDAGRESLRR 305 >UniRef50_Q71W74 Phosphosugar-binding transcriptional regulator, RpiR family n=17 Tax=Listeria RepID=Q71W74_LISMF Length = 283 Score = 206 bits (525), Expect = 7e-52, Method: Composition-based stats. Identities = 62/274 (22%), Positives = 122/274 (44%), Gaps = 5/274 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L KI + T +E+++A+++ AN + +++A +S ++I + KLG Sbjct: 1 MNILIKIRE-LTNLTNSEKELANYILANPKKTLQCKPKELATAAFVSAATIYRLINKLGL 59 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 G EL++ + RE L+ I D+ I LN+ + +++T Sbjct: 60 NGIGELKIEIASSL---RETNEEKDLNYDYPILESDTPYQIMTNLNQIYKGTIDETLNNA 116 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D L KI E + +A I + + ++ F++ +IG V + ++Q+ + Sbjct: 117 DPEELVKIGEKLIQAKTIDVYAASANLFFAQNFKFQMQEIGVLVNVPEEDYIQSLSAANS 176 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + + I +SY G + + + + +I ITS+ D+PL A + S E + Sbjct: 177 DENHIAIVVSYGGRSRTLQRVVKILSENNVDIILITSMQDNPLVEFATHKIYMASAENHY 236 Query: 241 -RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKM 273 + SS STR + S+ D L+ N ++++ Sbjct: 237 NKVSSFSTRQSLLSIFDTLYSIYFNQNYEKNIQY 270 >UniRef50_C0XD02 RpiR family transcriptional regulator n=1 Tax=Lactobacillus gasseri JV-V03 RepID=C0XD02_9LACO Length = 294 Score = 206 bits (525), Expect = 7e-52, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 132/296 (44%), Gaps = 14/296 (4%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 ML ++ + + NE+ +A++L ++ + R +A++ S S+I++ KLG Sbjct: 1 MLIKDQLREKKN-MSNNEKIVANYLLKADENIEKDTVRTVAEKTYTSPSTIIRLCHKLGF 59 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF++ + + E + + ++ +D+ + K+ ++ T ++ Sbjct: 60 TGFSDFKNKFLNEVKYFNLQFQ--NVDVNFPFRREDTAREVMSKITDLYIETIKDTEKVV 117 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D L + ++ S++ I I G K+MKIG +V ++ + Q ++ + Sbjct: 118 DMRTLLRCRKICSESEEIHIFSYGTYLNQAYSFKEKMMKIGKKVMISSNLNYQLYEAEIM 177 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + GD+ I ISYSG +L A+ RK IAITS+ ++ L ++ TL + E+ + Sbjct: 178 QAGDIAIIISYSGETNNSLLIAKQCRKNNIPTIAITSIGENDLTKICDETLYISTKESLY 237 Query: 241 R-SSSMSTRTAQNSVTDLLFVGLVQLNDVE----------SLKMIQRSSELTQRLK 285 + S + + V D+L+ + Q + SL+ +RSS K Sbjct: 238 KNIGDYSIHLSVSYVLDVLYSLIFQNDFEHFYETKMNLAMSLEKDRRSSNSIIDNK 293 >UniRef50_C0C1I3 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C1I3_9CLOT Length = 288 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 70/280 (25%), Positives = 134/280 (47%), Gaps = 5/280 (1%) Query: 7 ISNAGSEFTENEQKIADFLQANVSELQSVSS-RQMAKQLGISQSSIVKFAQKLGAQGFTE 65 I+ E+K AD++ + E S + A + G S+++ V+ AQKLG G+ + Sbjct: 12 ITAIYDTLRGAERKAADYVLLHPQEAALHSIITESAGRAGCSEATFVRLAQKLGYNGYAQ 71 Query: 66 LRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARL 125 L+ L+ +A +T L + I + + + + AL+ T LLD Sbjct: 72 LKQMLLPAEAAFEPET----LLPYGDIGRGEDSQAVLCSVFHAAARALDDTLDLLDRKVY 127 Query: 126 QKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDV 185 ++ + I++A I G G + K +IG R C AD VQ + +K+GDV Sbjct: 128 EESLSYITRAGKILSAGAGDAYTAAYSAYLKFSRIGLRAVCPADFDVQIMEASGMKRGDV 187 Query: 186 QIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSM 245 + IS+SGS + + AE A+ + A +I +T+ SPL +L+ + T + + ++ Sbjct: 188 LLLISHSGSTRTLCQVAETAKAKKARIITVTNYPLSPLAKLSDCVIRTAAFTKNPCNETV 247 Query: 246 STRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + R + + + L++ ++Q + + KM+ ++E ++ K Sbjct: 248 AKRIPELCIIEALYISILQGREEKYAKMLAAANEELRKNK 287 >UniRef50_UPI00016A71F3 transcriptional regulator, RpiR family protein n=1 Tax=Burkholderia oklahomensis EO147 RepID=UPI00016A71F3 Length = 300 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 54/275 (19%), Positives = 110/275 (40%), Gaps = 9/275 (3%) Query: 7 ISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTEL 66 I + ++ +A ++A G+S+ ++V+F + LG G + Sbjct: 16 IHARLPDLAAAQRLVAKVFLDKPEWAMQAHVNEIAVFAGVSEPTVVRFCRALGFHGLRDF 75 Query: 67 RMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQ 126 ++ + + + ++ LH ++T+ DS++ I K+ R L L +++ Sbjct: 76 KLRVAQQVALG-------SVALHRNVTAVDSIDEIVGKVLRSSADILLDIERQLPREQIK 128 Query: 127 KIIEVISKAPFIQITGLGG-SALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDV 185 + I + A + G+G S V D +L + G + D ++Q + L GD Sbjct: 129 RAISALGSAHRVDCYGVGTTSGFVAADAQARLFRFGIQAQTYTDANMQMFSAATLSPGDG 188 Query: 186 QIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSM 245 IA+S+ G ++ AR++GA VI I +PL L + Sbjct: 189 VIAVSHFGRMPFLLEAVRVARERGAVVIGIC-EPGTPLAGECDIPLTFALPASVNAYIGS 247 Query: 246 STRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSEL 280 A ++ D+L VG+ ++ ++R + Sbjct: 248 DACIAHLAIIDILIVGVAFERGAAGIEQLRRLQNV 282 >UniRef50_B9E8A7 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E8A7_MACCJ Length = 285 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 67/285 (23%), Positives = 129/285 (45%), Gaps = 9/285 (3%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L +I+ FT E++IAD + ++ ++ +++A S+++IV+F+++LG Sbjct: 3 SVLGQITKMYDSFTPVEKRIADVVIEYPEKVVNLPIKEIAHLSNTSEAAIVRFSKRLGLS 62 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G +++ L E +K + + I D EV+ K+ AL T ++ Sbjct: 63 GIKVVKVELARELHTIADKK------VPTKIELTDDEEVMKEKVFNNTIQALYNTEKVIS 116 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + + + I+ A + I G+G S +V DL KLM I D T+ + Sbjct: 117 AKVIDEAAQAITSAKRVMIFGVGNSRVVATDLHVKLMNIDQSAILATDLLSAITLLGHYE 176 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 GDV S + K I + A+++G +I +T SP R+A L E E Sbjct: 177 AGDVLFVTSETSKNKVITDICKYAKEKGIKIILLTQKFSSPAIRMADIVLAMAKEENEIN 236 Query: 242 SSSMSTRTAQNSVTDLLFV---GLVQLNDVESLKMIQRSSELTQR 283 M+ RTAQ ++ D+L++ ++ + +++ + + ++T Sbjct: 237 LGYMTVRTAQLTIVDVLYLRVCAYLKDTVLSNMQNLNETRKITHE 281 >UniRef50_C9A459 Phosphosugar isomerase transcriptional regulator n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A459_ENTGA Length = 268 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 59/269 (21%), Positives = 127/269 (47%), Gaps = 11/269 (4%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M +T I + +E + + K+AD++ N+ E+ +++S +A S +++++F++KLG Sbjct: 1 MSVVTTIESIKNELSTTDLKLADYIVENLDEIPTMTSNVLAVHSNTSPAAVIRFSKKLGF 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 F++ ++AL + + +S I +DDS + K+ R ++ ++ T +L Sbjct: 61 SKFSDFKLALTKDI-------ENRIYNEYSDIQNDDSFQTAKNKILRNNKMIIDATDPIL 113 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D +Q++++ + A I + G+G S L D+ K +IG V + D ++ + Sbjct: 114 DEQTVQQVVDKMFHAKRIYVYGVGTSVLAAEDIRQKWTRIGKTVIFDKDRYLLTQQMKND 173 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGET-- 238 + IS+SG ++++ E A+ G + ++ L + L + + T E Sbjct: 174 GADSLFWGISHSGKNRDVLSLVEIAKSLGMPTLGMSQLGQNQLTKKVDTPIHTARTEDIK 233 Query: 239 --EWRSSSMSTRTAQNSVTDLLFVGLVQL 265 + S + + Q DLLF ++ Sbjct: 234 NGHYGSGATHSIILQIVTIDLLFYFYMRR 262 >UniRef50_C4FU45 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FU45_9FIRM Length = 277 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 71/288 (24%), Positives = 136/288 (47%), Gaps = 19/288 (6%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L +I + EQ +A ++ +++ +MAK+ G+S ++I +F +K+G Sbjct: 1 MGVLERIEANFVHLSPKEQLLATYIMQESPYFTNITISEMAKETGVSAATITRFCRKVGC 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 + F +L++ L S S+ + ++ +++T L Sbjct: 61 ESFVDLKIQLQASEGES---------------ASNHQNHDMFDTVSEFYNRIIQRTSELQ 105 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 +L+++I+V+S+A I + G+G S L R+L+ +L ++G E D+H+ S Sbjct: 106 SEYQLRQLIQVLSQANRIMVYGMGSSGLTARELAIRLSRMGLPATSETDSHMMIISSTVT 165 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + DV IAIS SG K+++ A++ GA ++AITS+ S L +LA TL + Sbjct: 166 RSSDVVIAISNSGETKDVIDALGNAKQNGAILVAITSMKGSSLAKLADETLLVHNSRFVN 225 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDV---ESLKMIQRSSELTQRLK 285 ++T+ + D + ++ N V K IQ + + Q+L+ Sbjct: 226 SEFFVNTQLPIFFLIDAI-TLMMLENPVFSQNMQKTIQEITSINQKLQ 272 >UniRef50_A4E6N7 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6N7_9ACTN Length = 301 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 62/250 (24%), Positives = 125/250 (50%), Gaps = 8/250 (3%) Query: 15 TENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEY 74 +E+EQ+I D++ + SE +++ Q+++ S++++ +F +KLG F + +L + Sbjct: 35 SESEQRIVDYILEHQSEAPRLTAAQLSRAAATSEATVSRFCRKLGFGSFRSFQFSLARDL 94 Query: 75 SASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISK 134 + R + + L D++E + + K L T +D+ L ++ + Sbjct: 95 ESQRNEGLTDEVSL-------DNMEQSLKNILAAKVSELNATIDGIDHDTLAAVVHALKH 147 Query: 135 APFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGS 194 A I+ +G + V D +FK ++G R + + L+ GDV + IS SG Sbjct: 148 AGVIEFAAVGNTNAVALDATFKFSQLGLRCMASTISETSIGFALTLRPGDVIVLISNSGK 207 Query: 195 KKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMS-TRTAQNS 253 + + A+AAR GATV+ I+S + SPL RLA +T +TV+ E + + ++ + Sbjct: 208 SRRLNRMAKAARNCGATVVVISSDSKSPLARLADYTFNTVNHEALLTTGDFAFSKISATM 267 Query: 254 VTDLLFVGLV 263 + ++++ L+ Sbjct: 268 IIEVIYNFLL 277 >UniRef50_B9DVM9 RpiR family regulatory protein n=2 Tax=Streptococcus RepID=B9DVM9_STRU0 Length = 295 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 80/284 (28%), Positives = 137/284 (48%), Gaps = 7/284 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M KI S F+ +EQK+ DF+ + S+ Q+AK+ S+S++V+ AQKLG Sbjct: 1 MFINEKIE--LSAFSPSEQKVVDFILKEKEHISEWSTSQIAKETYTSKSTLVRIAQKLGF 58 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 G+T R A E + ++ +A +L D+ IA KL K+ +++T L Sbjct: 59 SGWTSFRQAFHEEVTYLLKQADAHDANL--PFDKTDNNLEIASKLAHLKKEVIDETLHLS 116 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 L K I +IS A + + + GR+ + + +I V D H + L Sbjct: 117 RNKDLNKAIHLISHARTVHLFAASNNLHNGREFAHNMKRIQKDVQLH-DLHGEIHFDALL 175 Query: 181 KKGD-VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETE 239 + D I ISYSG ++ A+ RK+ +IA+TSL D+P+ +L+ TL + E Sbjct: 176 AEEDSCAIIISYSGGTLSLIKVAQILRKKEIPIIALTSLGDNPISQLSQVTLRLSTKEKL 235 Query: 240 W-RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 + + + +T T+ + DLL+ + N +L Q++S+ + Sbjct: 236 YSKIGTYATDTSITFILDLLYSIYFRQNYDYNLAFRQKTSQEIE 279 >UniRef50_A0ZNS9 Putative uncharacterized protein n=3 Tax=Photobacterium RepID=A0ZNS9_PHOPO Length = 277 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 97/270 (35%), Positives = 155/270 (57%), Gaps = 7/270 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M + KI+N S+ + + QKIA + + + S+SS Q+A+Q + QSSIVKF QKLG Sbjct: 1 MTIIAKIANIKSQLSPSAQKIAALILQQPAAVVSLSSLQLAQQANVGQSSIVKFTQKLGF 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF + A+ E + + N L + I+ D+L IA+KL +K A+ +T + Sbjct: 61 TGFPAFKNAIKEELARQQAIGNDPQ-QLQNQISHSDTLITIAQKLAHQKTDAIIETTNAI 119 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D L+ II + A IQ+ G G SA++ +D S KL+ +G E D+ Q +++ L Sbjct: 120 DEQNLKNIIALFINAQRIQLVGFGHSAIIAKDFSTKLLTLGMMAIAEQDSRSQIDIAKTL 179 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 D+Q I Y G+ ++ +L A +A+ +GAT+IA+TS +PLR+LA F+LDT++ ET Sbjct: 180 GPTDIQCHICYDGNHQDALLTAHSAKMKGATLIALTSPHSTPLRQLAQFSLDTLAIETSN 239 Query: 241 ------RSSSMSTRTAQNSVTDLLFVGLVQ 264 + S+++ AQ ++TDLLF+ L Sbjct: 240 HRQYQPHNYSIASHAAQQTLTDLLFMALTH 269 >UniRef50_B7RLA4 Transcriptional regulator, RpiR family n=1 Tax=Roseobacter sp. GAI101 RepID=B7RLA4_9RHOB Length = 317 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 55/275 (20%), Positives = 118/275 (42%), Gaps = 8/275 (2%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 ++ + EQK+A++++A++ ++ +++ ++A +S ++++F + LG G Sbjct: 31 VISALRRHDGHLATQEQKVANYVKAHLEDISAMTIAELAGHCDVSTPTVIRFCRTLGCDG 90 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 F E ++ L + S + +A D ++ I + + +D Sbjct: 91 FREFKLRLAQNLAVSMQYLSADPQ--PEPADGDTAINQILGGIYASANVM----RRQIDP 144 Query: 123 ARLQKIIEVISKAPFIQITGL-GGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L + + K + G+ GGS+ V ++ + + ++G +D+++ + L+ Sbjct: 145 EVLDRAKSALLKTRHLLFAGIGGGSSNVSQEAANRFFRLGIPSFSTSDSYILQMRAATLQ 204 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 GDV IS SG IV AE A GAT I IT + L + + + E Sbjct: 205 AGDVLFLISASGEADAIVGAAEIAGGYGATTICITKSG-TRLANVCNIPILIDLPEDRDI 263 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQR 276 ++R + D L + + Q E+ + ++R Sbjct: 264 HKPTASRYIHMIIVDALAMSVAQDLAHETTENLRR 298 >UniRef50_C3RHU3 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RHU3_9MOLU Length = 281 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 60/270 (22%), Positives = 128/270 (47%), Gaps = 5/270 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + L K+ FT +E+ IA+++ + +L +S ++ K+ S++++++ +KL Sbjct: 4 MILEKLRERK-RFTNSEKLIAEYVLKHPEQLYQLSVEELGKETYTSKATVIRLCKKLEVN 62 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 + E + + EY E + ++L + + + + I + + + ++ QT LD Sbjct: 63 SYQEFKRQVEFEY---NELSRISSLLKDEPVDENSTYQDIVKVIPTIYDKSIVQTRLDLD 119 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 ++ ++I +S+A I I G G S + +FK+M +G + + +SQ Sbjct: 120 QNKMIQVINRLSQAKRISIYGTGISYTIASQAAFKIMTLGKECDAHSGINEHFILSQKNS 179 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 + V I IS++G+ E++ A+ +K G VIAI L+ L+ S + Sbjct: 180 RQCVAILISFTGNNSEMIKIAKYLKKAGIYVIAI-GGKKGELQNYCDIYLNVYSSQDILS 238 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESL 271 +++ TA V D++FV L+ + ++ Sbjct: 239 LEVITSFTATMYVLDVIFVSLLVKDYQSNV 268 >UniRef50_C3RR03 Sugar isomerase n=2 Tax=Bacteria RepID=C3RR03_9MOLU Length = 298 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 67/274 (24%), Positives = 127/274 (46%), Gaps = 5/274 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 ML KI A ++++Q IAD+L S ++ ++ +++A S +I++ A+KLG Sbjct: 1 MLIEQKIERA--RLSQSQQLIADYLLEKRSNIKDMTIKELAVATYTSTGTIIRLAKKLGY 58 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 G+ + + + E T+ + + D+++ IA K+ + L T ALL Sbjct: 59 HGYEDFKADFLKE--VYYLDTHFKNIDPNFPFVKTDNIQKIASKVTLLAQETLSDTLALL 116 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 ++ LQK + ++ KA I + + S L+G+ +++IG V + + + Sbjct: 117 EHDNLQKALRIMQKANQIHLAAISYSLLLGQIFKLDMLRIGKNVNICNTNGEELFLPAVI 176 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 K D I ISYSG + A + + +IAITSL D+ L++ A L + E + Sbjct: 177 KNNDCIIIISYSGEIHNLCSLARTLKGRSVPIIAITSLGDNELKKYADVVLHISTREKLY 236 Query: 241 -RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKM 273 + + S + + D+L+ L ++L Sbjct: 237 SKIAGYSNENSIKLILDILYSCYFNLMYDDNLAR 270 >UniRef50_Q1J381 Transcriptional regulator, RpiR family n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J381_DEIGD Length = 286 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 112/254 (44%), Gaps = 15/254 (5%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L ++ ++ ++IA ++ A+ E+ + ++A G+ +S++ + ++LG GF Sbjct: 20 LARLHAERAQLPPTLERIAAYVVAHPEEVIYQTITELAATAGVVESAVTRLCRRLGFSGF 79 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 ++AL G+ S ++ AT R+ A+E T + D A Sbjct: 80 HAFKIALSGDVSQAQGAAEATDPF---------------SVAARQAVQAIEGTRQVADPA 124 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L+++ + I+ A + + G S L + L+ KL ++G D H+ A + Sbjct: 125 ALERVAQAIAAATRVDVVGQSNSGLSAQFLANKLARVGVPAFAYTDPHLAAVAAATQSPR 184 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 V + + SGS + V A +GA +A+T SP+ R A L T S E+ Sbjct: 185 GVVVGFTRSGSTIDTVQTLRLAASKGACTVAVTHRASSPVTRYAREVLATSSPESPLAGG 244 Query: 244 SMSTRTAQNSVTDL 257 ++S+ +Q + + Sbjct: 245 ALSSLVSQVLLVEA 258 >UniRef50_D1TJG3 Putative transcriptional regulator, RpiR family n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TJG3_9BURK Length = 325 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 73/281 (25%), Positives = 135/281 (48%), Gaps = 10/281 (3%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 + +I+ E E+K+A + +++ S +A+Q +S +++ +FA+ +G + Sbjct: 41 IVARIAECAPELRSAERKVAALILDDLTGASRASIGALAQQAEVSIATVTRFAKAVGCRD 100 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 EL++ L + + A + D+ E IA ++ E + AL LL Sbjct: 101 VRELKLRLAQAAAVGQRFLERDA--------ASDAPEPIATRVFDELQTALAHNHQLLRQ 152 Query: 123 ARLQKIIEVISKAPFIQITGLGG-SALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 A L + + A I + G+GG S + ++ F+L+++G VA D +Q V+ + Sbjct: 153 APLAEAAAALRNARMIYVFGMGGGSTALADEMRFRLVRLGRPVATYQDGLLQRMVASTVS 212 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 + V +A+S +G E+V + AR GATV+A+T+ SPL RLA + + V+ ET++ Sbjct: 213 RDCVVVALSTTGRVPEMVENCKIARSYGATVVAVTA-PASPLARLADWLIPIVAFETDFI 271 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 S+R A D+L L ES ++++R Sbjct: 272 YKPSSSRYAMMMALDVLVTELAVSQGDESRELLRRMKHALD 312 >UniRef50_Q38V38 Putative transcriptional regulator with a sugarisomerase domain, RpiR family n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38V38_LACSS Length = 276 Score = 203 bits (517), Expect = 5e-51, Method: Composition-based stats. Identities = 66/285 (23%), Positives = 129/285 (45%), Gaps = 10/285 (3%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M + I S + EQK+A + + +Q + ++A +L +S S+I +F +K+G Sbjct: 1 MAIIEHIKQQYSFLSPQEQKVALAVIQKGASIQRIGIDELAAELQVSNSTISRFVRKIGC 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 Q F + ++ + + T + S S+E + + + + +T A + Sbjct: 61 QNFVDFKLQF-----SEGPQPTMTGVQGQVDHESQTSVE-----IYQFYQDVITKTQARI 110 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 A L +++ I + + I GLG S G + +L ++G + ++H+ S+ + Sbjct: 111 KQADLDQLVSWIKTSQQLFIYGLGSSGYTGAEFGQRLTRMGIQATVVTESHMMLMTSRII 170 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 K D+ I +S SG+ +E+ + AR+ GA AITS TDSPL + TL Sbjct: 171 NKTDLVIGLSNSGNTEEVNQAVQNARENGAKTAAITSGTDSPLAAASDLTLFVEDSIGFA 230 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + ++++ A V D+L + L++ + + +LK Sbjct: 231 SARFVNSQFALTYVIDILAMLLLEDEQYNWRMKQTVDTIMHHKLK 275 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q8R7I8 Transcriptional regulator n=3 Tax=Firmicutes Rep... 306 7e-82 UniRef50_C7MQM6 Transcriptional regulator, RpiR family n=5 Tax=A... 303 3e-81 UniRef50_C6WFA6 Transcriptional regulator, RpiR family n=2 Tax=A... 300 3e-80 UniRef50_A4F6M8 RpiR-family transcriptional regulator n=7 Tax=Ac... 299 5e-80 UniRef50_UPI0001788119 transcriptional regulator, RpiR family n=... 299 1e-79 UniRef50_C0ZD50 Transcriptional regulator n=32 Tax=Bacillales Re... 296 4e-79 UniRef50_Q8RD36 Uncharacterized HTH-type transcriptional regulat... 294 2e-78 UniRef50_A1HSQ6 Transcriptional regulator, RpiR family n=1 Tax=T... 292 8e-78 UniRef50_B8E0M8 Transcriptional regulator, RpiR family n=2 Tax=D... 289 8e-77 UniRef50_C6Q8T9 Transcriptional regulator, RpiR family n=1 Tax=T... 288 1e-76 UniRef50_C6J1X3 RpiR family transcriptional regulator n=2 Tax=Ba... 287 2e-76 UniRef50_C0ZJF9 Transcriptional regulator n=1 Tax=Brevibacillus ... 287 3e-76 UniRef50_UPI000196C77F hypothetical protein CATMIT_02718 n=1 Tax... 286 4e-76 UniRef50_C4L752 Transcriptional regulator, RpiR family n=4 Tax=B... 286 6e-76 UniRef50_A8FJ30 Possible RpiR family transcriptional regulator n... 285 1e-75 UniRef50_A8S9N1 Putative uncharacterized protein n=3 Tax=Bacteri... 285 1e-75 UniRef50_C0CSK7 Putative uncharacterized protein n=1 Tax=Blautia... 284 2e-75 UniRef50_Q97MK5 Uncharacterized HTH-type transcriptional regulat... 284 2e-75 UniRef50_C6D7K6 Transcriptional regulator, RpiR family n=1 Tax=P... 281 1e-74 UniRef50_D2AR91 Putative transcriptional regulator, RpiR family ... 281 2e-74 UniRef50_A8LV24 Transcriptional regulator, RpiR family n=7 Tax=A... 281 2e-74 UniRef50_C6J4B4 Transcriptional regulator n=1 Tax=Paenibacillus ... 281 2e-74 UniRef50_A7GD47 Transcriptional regulator, RpiR family n=10 Tax=... 281 3e-74 UniRef50_C0Z7S3 Transcriptional regulator n=1 Tax=Brevibacillus ... 280 4e-74 UniRef50_C5C2G7 Transcriptional regulator, RpiR family n=1 Tax=B... 280 4e-74 UniRef50_C4V1J5 RpiR family transcriptional regulator n=1 Tax=Se... 280 5e-74 UniRef50_A9KIQ0 Transcriptional regulator, RpiR family n=1 Tax=C... 279 6e-74 UniRef50_C4G9W4 Putative uncharacterized protein n=1 Tax=Shuttle... 278 1e-73 UniRef50_A0KFB6 Transcriptional regulator, RpiR family n=3 Tax=G... 278 2e-73 UniRef50_Q4LA29 Similar to transcriptional regulator n=1 Tax=Sta... 278 2e-73 UniRef50_B6ITC5 HTH-type transcriptional regulator hexR, putativ... 278 2e-73 UniRef50_UPI0001693BD8 YbbH n=1 Tax=Paenibacillus larvae subsp. ... 277 3e-73 UniRef50_B5I8T9 Sugar isomerase n=1 Tax=Streptomyces sviceus ATC... 277 3e-73 UniRef50_C2D8M2 Possible transcriptional regulator n=1 Tax=Atopo... 276 9e-73 UniRef50_B2TJ91 Transcriptional regulator, RpiR family n=1 Tax=C... 276 9e-73 UniRef50_C5CIM2 Transcriptional regulator, RpiR family n=1 Tax=K... 275 9e-73 UniRef50_P44540 Uncharacterized HTH-type transcriptional regulat... 275 9e-73 UniRef50_A8RRF4 Putative uncharacterized protein n=5 Tax=Clostri... 274 2e-72 UniRef50_C6XNZ1 Transcriptional regulator, RpiR family n=1 Tax=H... 274 2e-72 UniRef50_A8RI47 Putative uncharacterized protein n=1 Tax=Clostri... 274 3e-72 UniRef50_A6LRF3 Transcriptional regulator, RpiR family n=2 Tax=B... 273 4e-72 UniRef50_B4EZY5 RpiR-family transcriptional regulator n=54 Tax=G... 272 9e-72 UniRef50_Q1QSE2 Transcriptional regulator, RpiR family n=28 Tax=... 271 2e-71 UniRef50_Q1LPJ6 Transcriptional regulator, RpiR family n=6 Tax=B... 270 3e-71 UniRef50_D1YCB1 Transcriptional regulator, RpiR family n=3 Tax=P... 270 3e-71 UniRef50_B1YJ20 Transcriptional regulator, RpiR family n=1 Tax=E... 270 4e-71 UniRef50_C1PDB4 Transcriptional regulator, RpiR family n=1 Tax=B... 270 4e-71 UniRef50_A9MIE1 HTH-type transcriptional regulator murR n=48 Tax... 270 4e-71 UniRef50_A4TMJ1 RpiR-family transcriptional regulatory protein n... 269 5e-71 UniRef50_C0D6A5 Putative uncharacterized protein n=1 Tax=Clostri... 269 6e-71 UniRef50_C2L140 RpiR family transcriptional regulator n=6 Tax=Cl... 269 7e-71 UniRef50_C3WE65 Transcriptional regulator n=5 Tax=Fusobacterium ... 269 9e-71 UniRef50_Q45581 Uncharacterized HTH-type transcriptional regulat... 269 1e-70 UniRef50_A9KMQ5 Transcriptional regulator, RpiR family n=1 Tax=C... 268 1e-70 UniRef50_C4DDH7 Transcriptional regulator, RpiR family n=1 Tax=S... 268 2e-70 UniRef50_UPI0001789683 transcriptional regulator, RpiR family n=... 268 2e-70 UniRef50_C8W838 Transcriptional regulator, RpiR family n=1 Tax=A... 267 3e-70 UniRef50_C4FUK3 Putative uncharacterized protein n=1 Tax=Catonel... 267 3e-70 UniRef50_UPI000197C448 transcriptional regulator n=1 Tax=Provide... 266 4e-70 UniRef50_A6LUR0 Transcriptional regulator, RpiR family n=2 Tax=C... 266 4e-70 UniRef50_C9AZQ1 Phosphosugar isomerase transcriptional regulator... 266 5e-70 UniRef50_C3RKW6 Sugar isomerase n=3 Tax=Bacteria RepID=C3RKW6_9MOLU 266 5e-70 UniRef50_A7VQA6 Putative uncharacterized protein n=1 Tax=Clostri... 266 6e-70 UniRef50_A5L3V2 Transcriptional regulator, RpiR family protein n... 266 8e-70 UniRef50_A6LVH8 Transcriptional regulator, RpiR family n=8 Tax=F... 265 1e-69 UniRef50_A8FIY5 Possible RpiR family transcriptional regulator n... 265 1e-69 UniRef50_B0N1V0 Putative uncharacterized protein n=2 Tax=Bacteri... 265 1e-69 UniRef50_C8NZR0 RpiR family transcriptional regulator n=1 Tax=Er... 264 3e-69 UniRef50_A8RWE9 Putative uncharacterized protein n=1 Tax=Clostri... 263 4e-69 UniRef50_D1ALE3 Transcriptional regulator, RpiR family n=1 Tax=S... 263 4e-69 UniRef50_C6L9A2 Transcriptional regulator, RpiR family n=1 Tax=B... 263 6e-69 UniRef50_B6GA31 Putative uncharacterized protein n=1 Tax=Collins... 263 7e-69 UniRef50_P46118 HTH-type transcriptional regulator hexR n=302 Ta... 262 1e-68 UniRef50_Q3JNN8 Transcriptional regulator, RpiR family n=54 Tax=... 261 2e-68 UniRef50_D0W145 Transcriptional regulator HexR n=3 Tax=Neisseria... 261 2e-68 UniRef50_A9M040 RpiR/YebK/YfhH family transcriptional regulator ... 261 2e-68 UniRef50_C3RM33 Sugar isomerase n=2 Tax=Bacteria RepID=C3RM33_9MOLU 260 5e-68 UniRef50_Q2G836 Transcriptional regulator, RpiR family n=4 Tax=P... 259 6e-68 UniRef50_D1AUV3 Transcriptional regulator, RpiR family n=5 Tax=B... 259 7e-68 UniRef50_UPI000196C511 hypothetical protein CATMIT_02677 n=1 Tax... 259 9e-68 UniRef50_D2AGN5 Transcriptional regulator, RpiR family n=1 Tax=S... 258 1e-67 UniRef50_Q04DU1 Transcriptional regulator n=2 Tax=Oenococcus oen... 258 1e-67 UniRef50_A1AYM0 Transcriptional regulator, RpiR family n=3 Tax=P... 257 3e-67 UniRef50_A4EAC5 Putative uncharacterized protein n=2 Tax=Collins... 257 3e-67 UniRef50_Q184N2 Putative phosphosugar-binding transcriptional re... 257 3e-67 UniRef50_C2D3P4 RpiR family transcriptional regulator (Fragment)... 257 4e-67 UniRef50_A0AJB4 Complete genome n=7 Tax=Bacillales RepID=A0AJB4_... 257 4e-67 UniRef50_C2D9S0 RpiR family transcriptional regulator n=1 Tax=At... 256 5e-67 UniRef50_Q9K6Z8 Transcriptional regulator (Hex regulon repressor... 256 5e-67 UniRef50_C4KZ09 Transcriptional regulator, RpiR family n=85 Tax=... 256 5e-67 UniRef50_C0D4M2 Putative uncharacterized protein n=1 Tax=Clostri... 256 6e-67 UniRef50_A4VXR0 Transcriptional regulator n=5 Tax=Streptococcus ... 256 7e-67 UniRef50_A6UCC0 Transcriptional regulator, RpiR family n=4 Tax=P... 256 8e-67 UniRef50_A9BXM8 Transcriptional regulator, RpiR family n=16 Tax=... 255 1e-66 UniRef50_C1I531 Transcriptional regulator n=1 Tax=Clostridium sp... 255 1e-66 UniRef50_C2C2H3 Bifunctional RpiR family transcriptional regulat... 255 2e-66 UniRef50_A8F3D9 Transcriptional regulator, RpiR family n=1 Tax=T... 255 2e-66 UniRef50_C5CG85 Transcriptional regulator, RpiR family n=1 Tax=K... 255 2e-66 UniRef50_B8KWX3 Bifunctional protein glk n=3 Tax=unclassified Ga... 254 2e-66 UniRef50_B9K581 Transcriptional repressor of rpiB expression; tr... 254 2e-66 UniRef50_Q02VU4 Transcriptional regulator n=4 Tax=Lactococcus la... 254 3e-66 UniRef50_Q38YX9 Gluconate operon transcriptional regulator, RpiR... 253 4e-66 UniRef50_C1XRD4 Transcriptional regulator n=1 Tax=Meiothermus si... 253 6e-66 UniRef50_A0JVW9 Transcriptional regulator, RpiR family n=2 Tax=A... 252 1e-65 UniRef50_P26833 Uncharacterized HTH-type transcriptional regulat... 252 1e-65 UniRef50_Q9CKN4 Putative uncharacterized protein n=1 Tax=Pasteur... 252 1e-65 UniRef50_B7RYI4 Transcriptional regulator, RpiR family protein n... 252 1e-65 UniRef50_C0CU66 Putative uncharacterized protein n=2 Tax=Clostri... 252 1e-65 UniRef50_D0GPL3 Transcriptional regulator, RpiR family n=1 Tax=L... 251 2e-65 UniRef50_C2D9G3 RpiR family transcriptional regulator n=1 Tax=At... 251 2e-65 UniRef50_D1AG49 Transcriptional regulator, RpiR family n=1 Tax=S... 251 3e-65 UniRef50_C3JIB3 RpiR-family transcriptional regulator n=2 Tax=Rh... 250 3e-65 UniRef50_Q9WYG1 Uncharacterized HTH-type transcriptional regulat... 250 4e-65 UniRef50_A8SDH7 Putative uncharacterized protein n=1 Tax=Faecali... 250 4e-65 UniRef50_D2PUN7 Transcriptional regulator, RpiR family n=1 Tax=K... 250 4e-65 UniRef50_C8NHI8 Probable transcriptional regulator YbbH n=1 Tax=... 250 4e-65 UniRef50_A1JQZ2 RpiR family regulatory protein n=12 Tax=Enteroba... 250 5e-65 UniRef50_Q13K65 Transcriptional regulator, RpiR family n=7 Tax=B... 249 8e-65 UniRef50_A5EB66 Transcriptional regulator, RpiR family n=1 Tax=B... 248 1e-64 UniRef50_A9NEV7 Transcriptional regulator, RpiR family n=1 Tax=A... 248 2e-64 UniRef50_C2JLW7 Bifunctional RpiR family transcriptional regulat... 247 2e-64 UniRef50_Q7MD38 Transcriptional regulator n=31 Tax=Gammaproteoba... 247 2e-64 UniRef50_A9BH25 Transcriptional regulator, RpiR family n=1 Tax=P... 247 3e-64 UniRef50_C4L7F8 Transcriptional regulator, RpiR family n=2 Tax=G... 247 3e-64 UniRef50_B7GUA9 Transcriptional regulator, RpiR family n=7 Tax=B... 247 4e-64 UniRef50_A6T0F7 Transcriptional regulator, RpiR family n=2 Tax=O... 246 6e-64 UniRef50_B5HLI6 RpiR-family transcriptional regulator n=3 Tax=St... 246 7e-64 UniRef50_Q03Q61 Transcriptional regulator n=1 Tax=Lactobacillus ... 246 7e-64 UniRef50_B9CM70 Transcriptional regulator, RpiR family n=1 Tax=A... 246 7e-64 UniRef50_A8UCF6 Phosphosugar-binding transcriptional regulator, ... 246 8e-64 UniRef50_C1PED1 Transcriptional regulator, RpiR family n=1 Tax=B... 246 8e-64 UniRef50_Q2JBJ8 Transcriptional regulator, RpiR family n=1 Tax=F... 246 9e-64 UniRef50_C6JFM8 Transcriptional regulator n=2 Tax=Clostridiales ... 245 1e-63 UniRef50_C5BVH6 Transcriptional regulator, RpiR family n=2 Tax=A... 245 1e-63 UniRef50_C9L6X6 Transcriptional regulator, RpiR family n=1 Tax=B... 245 2e-63 UniRef50_Q03YQ8 Transcriptional regulator n=4 Tax=Leuconostocace... 244 2e-63 UniRef50_A8RZI5 Putative uncharacterized protein n=1 Tax=Clostri... 244 2e-63 UniRef50_C0R285 Transcriptional regulator n=1 Tax=Brachyspira hy... 244 2e-63 UniRef50_Q03HR4 Transcriptional regulator, RpiR family n=2 Tax=P... 243 6e-63 UniRef50_D0DKU0 Transcriptional regulator n=1 Tax=Lactobacillus ... 242 7e-63 UniRef50_C7REF2 Transcriptional regulator, RpiR family n=2 Tax=A... 242 7e-63 UniRef50_Q2SNY6 Transcriptional regulator n=1 Tax=Hahella chejue... 242 9e-63 UniRef50_D1PSB4 Transcriptional regulator n=3 Tax=Clostridiales ... 242 1e-62 UniRef50_Q6AH41 Transcriptional regulator, RpiR family n=1 Tax=L... 242 1e-62 UniRef50_B1QW74 Transcriptional regulator n=2 Tax=Clostridium bu... 242 1e-62 UniRef50_C6VNS3 Transcription regulator n=3 Tax=Lactobacillus pl... 242 1e-62 UniRef50_C0X1P6 Transcriptional regulator RpiR n=21 Tax=Enteroco... 242 1e-62 UniRef50_B0NYS8 Putative uncharacterized protein n=2 Tax=Clostri... 241 2e-62 UniRef50_C5C1Y9 Transcriptional regulator, RpiR family n=1 Tax=B... 241 2e-62 UniRef50_A8UBX8 Phosphosugar-binding transcriptional regulator, ... 241 2e-62 UniRef50_B5FDJ7 Transcriptional regulator, RpiR family protein n... 241 2e-62 UniRef50_A4WDW6 Transcriptional regulator n=10 Tax=Enterobacteri... 241 3e-62 UniRef50_A8RDU7 Putative uncharacterized protein n=1 Tax=Eubacte... 240 3e-62 UniRef50_B9DJX2 Putative RpiR family transcriptional regulator n... 240 4e-62 UniRef50_A0Z4E2 Transcriptional regulator n=3 Tax=Bacteria RepID... 240 4e-62 UniRef50_Q03CI3 Transcriptional regulator n=10 Tax=Lactobacillac... 240 4e-62 UniRef50_C0X148 RpiR family transcriptional regulator n=22 Tax=E... 240 5e-62 UniRef50_A2RL41 Transcriptional regulator, RpiR family n=4 Tax=L... 239 6e-62 UniRef50_C0C246 Putative uncharacterized protein n=2 Tax=Clostri... 239 7e-62 UniRef50_D0R5V5 Transcriptional regulator n=10 Tax=Lactobacillus... 239 7e-62 UniRef50_Q040R4 Transcriptional regulator n=8 Tax=Lactobacillus ... 239 7e-62 UniRef50_B1R0U2 Transcriptional regulator, RpiR family n=9 Tax=F... 239 9e-62 UniRef50_C5EPZ9 Transcriptional regulator n=2 Tax=Clostridiales ... 239 9e-62 UniRef50_C8SX74 Transcriptional regulator, RpiR family n=1 Tax=M... 238 1e-61 UniRef50_Q2J8J9 Transcriptional regulator, RpiR family n=1 Tax=F... 238 1e-61 UniRef50_P37767 Uncharacterized HTH-type transcriptional regulat... 238 2e-61 UniRef50_C1IBM1 Phosphosugar-binding transcriptional regulator n... 238 2e-61 UniRef50_D0I0X8 Sialic acid utilization regulator RpiR family n=... 237 2e-61 UniRef50_D0KLH9 Transcriptional regulator, RpiR family n=1 Tax=P... 237 2e-61 UniRef50_C2H8J8 Bifunctional RpiR family transcriptional regulat... 237 3e-61 UniRef50_D0XGH5 Putative uncharacterized protein n=1 Tax=Vibrio ... 237 4e-61 UniRef50_C2HLD1 Transcriptional regulator n=3 Tax=Lactobacillus ... 236 5e-61 UniRef50_Q1WQV4 Transcriptional regulator, RpiR family n=4 Tax=L... 236 6e-61 UniRef50_B7UNF1 Predicted transcriptional regulator, RpiR family... 236 6e-61 UniRef50_B6G0W9 Putative uncharacterized protein n=1 Tax=Clostri... 236 7e-61 UniRef50_A6D304 DNA-binding transcriptional repressor RpiR n=1 T... 236 1e-60 UniRef50_A6LRG7 Transcriptional regulator, RpiR family n=2 Tax=F... 235 1e-60 UniRef50_UPI000197BCAC RpiR family transcriptional regulator n=1... 235 2e-60 UniRef50_Q03CT7 Transcriptional regulator n=7 Tax=Lactobacillus ... 234 2e-60 UniRef50_UPI00016945F6 hypothetical protein Plarl_13824 n=1 Tax=... 234 2e-60 UniRef50_UPI00017F2FF2 transcriptional regulator n=1 Tax=Escheri... 234 2e-60 UniRef50_Q1J2N3 Transcriptional regulator, RpiR family n=2 Tax=D... 234 2e-60 UniRef50_C6J2D0 Transcription regulator n=1 Tax=Paenibacillus sp... 234 4e-60 UniRef50_C8JWL0 Phosphosugar-binding transcriptional regulator n... 233 5e-60 UniRef50_UPI0001BCD92E RpiR family transcriptional regulator n=1... 232 8e-60 UniRef50_P46117 Uncharacterized HTH-type transcriptional regulat... 232 1e-59 UniRef50_A1BB20 Transcriptional regulator, RpiR family n=1 Tax=P... 232 1e-59 UniRef50_B9NXN7 Bifunctional protein glk n=2 Tax=Rhodobacteracea... 231 2e-59 UniRef50_D1AK74 Transcriptional regulator, RpiR family n=1 Tax=S... 231 3e-59 UniRef50_Q02YU6 Transcriptional regulator n=4 Tax=Lactobacillale... 231 3e-59 UniRef50_B5GNW3 RpiR-family transcriptional regulator n=14 Tax=S... 231 3e-59 UniRef50_B7C842 Putative uncharacterized protein n=1 Tax=Eubacte... 231 3e-59 UniRef50_C3RI81 Sugar isomerase n=1 Tax=Mollicutes bacterium D7 ... 231 3e-59 UniRef50_B9YAK0 Putative uncharacterized protein n=1 Tax=Holdema... 230 4e-59 UniRef50_C3RHA3 Transcriptional regulator n=3 Tax=Bacteria RepID... 230 5e-59 UniRef50_A9MLD6 Putative uncharacterized protein n=1 Tax=Salmone... 230 5e-59 UniRef50_Q5WK55 RpiR family transcriptional regulator n=1 Tax=Ba... 229 6e-59 UniRef50_C0X6G8 RpiR family transcriptional regulator n=23 Tax=E... 229 1e-58 UniRef50_Q28KP3 Transcriptional regulator, RpiR family n=6 Tax=A... 229 1e-58 UniRef50_C3RM35 Transcriptional regulator n=2 Tax=Bacteria RepID... 228 2e-58 UniRef50_D0RS60 RpiR family transcriptional regulator n=2 Tax=La... 228 2e-58 UniRef50_A3DDB2 Transcriptional regulator, RpiR family n=5 Tax=C... 227 3e-58 UniRef50_B7CB00 Putative uncharacterized protein n=1 Tax=Eubacte... 227 3e-58 UniRef50_C8P0W4 RpiR family phosphosugar-binding transcriptional... 227 4e-58 UniRef50_P0ACS8 HTH-type transcriptional regulator rpiR n=34 Tax... 227 4e-58 UniRef50_Q71VW8 Phosphosugar-binding transcriptional regulator, ... 227 4e-58 UniRef50_UPI00016A71F3 transcriptional regulator, RpiR family pr... 226 5e-58 UniRef50_A8UCF8 Phosphosugar-binding transcriptional regulator, ... 226 7e-58 UniRef50_D2BPE4 Transcriptional regulator, RpiR family n=1 Tax=L... 226 9e-58 UniRef50_B7RLA4 Transcriptional regulator, RpiR family n=1 Tax=R... 226 9e-58 UniRef50_C2KD15 RpiR family transcriptional regulator n=3 Tax=La... 225 1e-57 UniRef50_Q03HW7 Transcriptional regulator n=13 Tax=Lactobacillal... 225 1e-57 UniRef50_C7HWK5 RpiR family phosphosugar-binding transcriptional... 225 1e-57 UniRef50_C2C459 RpiR family transcriptional regulator n=1 Tax=Li... 225 1e-57 UniRef50_C6VMT8 Transcription regulator n=3 Tax=Lactobacillus pl... 225 1e-57 UniRef50_A9BEU1 Transcriptional regulator, RpiR family n=1 Tax=P... 225 2e-57 UniRef50_C0C5Q9 Putative uncharacterized protein n=1 Tax=Clostri... 224 3e-57 UniRef50_C4FU45 Putative uncharacterized protein n=1 Tax=Catonel... 224 3e-57 UniRef50_C7XVK6 6-phospho 3-hexuloisomerase n=1 Tax=Lactobacillu... 223 4e-57 UniRef50_B7X566 Transcriptional regulator, RpiR family n=1 Tax=C... 223 5e-57 UniRef50_C6B6F5 Transcriptional regulator, RpiR family n=7 Tax=A... 223 6e-57 UniRef50_B6GAC9 Putative uncharacterized protein n=1 Tax=Collins... 222 7e-57 UniRef50_C2L0R5 Possible transcriptional regulator RpiR n=1 Tax=... 222 7e-57 UniRef50_Q15N75 Transcriptional regulator, RpiR family n=1 Tax=P... 222 8e-57 UniRef50_D1AYR1 Transcriptional regulator, RpiR family n=2 Tax=F... 222 1e-56 UniRef50_B7LQI9 Transcriptional regulator n=32 Tax=Gammaproteoba... 222 1e-56 UniRef50_Q03FC5 Transcriptional regulator n=1 Tax=Pediococcus pe... 222 1e-56 UniRef50_C2LK66 Phosphosugar-binding transcriptional regulator n... 221 2e-56 UniRef50_D2ELR8 Transcription regulator n=1 Tax=Pediococcus acid... 221 2e-56 UniRef50_C0XD02 RpiR family transcriptional regulator n=1 Tax=La... 221 2e-56 UniRef50_C4KYQ0 Transcriptional regulator, RpiR family n=1 Tax=E... 221 2e-56 UniRef50_UPI0001BC57B3 oxygen-independent coproporphyrinogen III... 221 3e-56 UniRef50_C0X0S9 RpiR family transcriptional regulator n=22 Tax=E... 221 3e-56 UniRef50_C9A857 Transcription regulator n=3 Tax=Enterococcus cas... 221 3e-56 UniRef50_A8RCR9 Putative uncharacterized protein n=1 Tax=Eubacte... 220 4e-56 UniRef50_A4E6N7 Putative uncharacterized protein n=1 Tax=Collins... 220 4e-56 UniRef50_C2KAY2 Transcriptional regulator n=6 Tax=Lactobacillus ... 219 6e-56 UniRef50_Q0BBX6 Transcriptional regulator, RpiR family n=65 Tax=... 219 6e-56 UniRef50_A1HTD9 Transcriptional regulator, RpiR family n=1 Tax=T... 219 7e-56 UniRef50_Q1J381 Transcriptional regulator, RpiR family n=1 Tax=D... 219 9e-56 UniRef50_A9WVK2 Transcriptional regulator, RpiR family n=2 Tax=M... 219 9e-56 UniRef50_Q1YGT9 Putative transcriptional regulator, RpiR family ... 218 1e-55 UniRef50_C0D858 Putative uncharacterized protein n=1 Tax=Clostri... 218 1e-55 UniRef50_B9Y4T6 Putative uncharacterized protein n=2 Tax=Holdema... 218 2e-55 UniRef50_UPI000196B715 hypothetical protein CATMIT_00151 n=1 Tax... 218 2e-55 UniRef50_C5D4L1 Transcriptional regulator, RpiR family n=1 Tax=G... 217 2e-55 UniRef50_B2UK47 Transcriptional regulator, RpiR family n=5 Tax=R... 217 3e-55 UniRef50_C9A459 Phosphosugar isomerase transcriptional regulator... 217 3e-55 UniRef50_A6UGP6 Transcriptional regulator, RpiR family n=1 Tax=S... 217 3e-55 UniRef50_Q38V38 Putative transcriptional regulator with a sugari... 217 3e-55 Sequences not found previously or not previously below threshold: >UniRef50_Q8R7I8 Transcriptional regulator n=3 Tax=Firmicutes RepID=Q8R7I8_THETN Length = 285 Score = 306 bits (784), Expect = 7e-82, Method: Composition-based stats. Identities = 81/280 (28%), Positives = 151/280 (53%), Gaps = 7/280 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + KI + + T E+K+AD++ N + +S ++A++ G +++IV+F +++G Sbjct: 8 NVILKIQSIYNSLTNAEKKVADYVLENAESVIYLSITELAEKCGTGETTIVRFCRRIGLS 67 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF E ++ L E + +H +I+ +D L+V+ +K+ E LA+ T LL Sbjct: 68 GFQEFKLNLAKEIAE-------PETSIHENISFNDPLDVLVQKITTENTLAISNTVKLLS 120 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + L+K ++ I A IQ G+G S D +K M++G V D H+QA + +L Sbjct: 121 MSELEKAVDAIINARKIQFYGVGASGYTALDAKYKFMRLGLNVDANLDAHIQAISAVSLT 180 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV + IS+SGS K+ V A++ GA VIAIT+ SP+ +A L T + ET R Sbjct: 181 DKDVAVGISFSGSTKDTVETCRLAKEAGARVIAITNYARSPITSVADIVLLTSAKETPLR 240 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 S +++++ AQ + D+L+ + ++++ + ++++ Sbjct: 241 SGALTSKIAQLHILDILYTAVAVKLKDKAVQELNKTAKAV 280 >UniRef50_C7MQM6 Transcriptional regulator, RpiR family n=5 Tax=Actinomycetales RepID=C7MQM6_SACVD Length = 333 Score = 303 bits (778), Expect = 3e-81, Method: Composition-based stats. Identities = 86/282 (30%), Positives = 153/282 (54%), Gaps = 3/282 (1%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L +I + EQ++A + + S + S ++A S++++ +F + +G G+ Sbjct: 40 LVRIRSLLPGLARAEQRVAKVVLEDPSSVARRSITEVAMAAKTSETTVTRFCKAIGVGGY 99 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 +LR+AL + + + K++ L IT+DD L + K++ A+E+T LD A Sbjct: 100 PQLRIALAADTARTEAKSSR---DLGGDITADDDLASVVSKVSFADARAVEETAEQLDIA 156 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L ++ E++++A + + G+G SA V DL KL +IG +DTH+ T + L +G Sbjct: 157 ELTRVTELLAEATRVDVYGVGASAFVAADLQQKLHRIGRVSFAWSDTHIMLTSAAVLSEG 216 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 DV +AIS+SG+ + V A++ GAT +AIT+ SP+ +A L T + ET +RS Sbjct: 217 DVAVAISHSGATTDTVEALRVAKEHGATTVAITNFPRSPIASVADHVLTTAARETTFRSG 276 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + ++R AQ +V D LF+G+ Q ES+ ++ + E + Sbjct: 277 ATASRIAQLTVIDCLFIGVAQRRMDESMAALEATREAVNGHR 318 >UniRef50_C6WFA6 Transcriptional regulator, RpiR family n=2 Tax=Actinomycetales RepID=C6WFA6_ACTMD Length = 304 Score = 300 bits (770), Expect = 3e-80, Method: Composition-based stats. Identities = 82/282 (29%), Positives = 143/282 (50%), Gaps = 3/282 (1%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L KI + EQ++A + N + + S ++A+ G S++++ +F + +G G+ Sbjct: 11 LVKIRSLLPGLARAEQRVAKVVLDNPATVAHRSITEVAESAGTSETTVTRFCKAIGVGGY 70 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 ELR+AL + + T L I D L + K+ A+E+T L+ Sbjct: 71 PELRIALA---ADTARTAARTDRDLGGDIGPGDDLRQVVGKVAFADARAVEETAEQLNVD 127 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 LQ +++ +++A + + G G SA V DL KL +IG DTH+ T + L Sbjct: 128 TLQAVVDAVARAGRVDVYGFGASAFVAFDLQQKLHRIGRTCFAWNDTHIALTSAAVLTGA 187 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 DV + IS++GS E V AR++GAT +A+T+ SP+ +A L T + ET +RS Sbjct: 188 DVAVGISHTGSTTETVEALRVARERGATTVALTNFPRSPISEVADHVLTTAARETTFRSG 247 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +M++R AQ +V D LF+G+ Q + + ++ + + + Sbjct: 248 AMASRIAQLTVVDCLFIGVAQHHVESATSALEATYDAVAGHR 289 >UniRef50_A4F6M8 RpiR-family transcriptional regulator n=7 Tax=Actinomycetales RepID=A4F6M8_SACEN Length = 308 Score = 299 bits (768), Expect = 5e-80, Method: Composition-based stats. Identities = 83/278 (29%), Positives = 151/278 (54%), Gaps = 4/278 (1%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L +I + EQ++A+ + A+ + + S ++A+ G S++++ +F + +G G+ Sbjct: 16 LIRIRSLLPGLARAEQRVANIVLADPASVARRSITEVAEAAGTSETTVTRFCKAIGVGGY 75 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 +LR+AL + + T++ L S I +D + I K++ A+E+T LD Sbjct: 76 PDLRIALAADTAR----TSSRDRDLGSDIGPEDDVRKIIEKVSYADAKAVEETADQLDAE 131 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L+ +++ +++A I + G+G SA V DL KL +IG +DTH T + L++G Sbjct: 132 TLRSLVDAVARARRIDVYGVGASAFVALDLQQKLHRIGLTCFAWSDTHNALTSAAVLREG 191 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 DV I IS++G+ E V + A K+GAT A+T+ SP+ +A L T ET +RS Sbjct: 192 DVAIGISHTGATTETVEALQEAGKRGATTAALTNFARSPITEVADHVLTTAVRETTYRSG 251 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 +M++R Q +V D LF+G+ Q + ++ ++ + E Sbjct: 252 AMASRIGQLTVIDCLFIGVAQRHLDQTKAALEATYEAV 289 >UniRef50_UPI0001788119 transcriptional regulator, RpiR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788119 Length = 278 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 74/281 (26%), Positives = 138/281 (49%), Gaps = 7/281 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L ++ +E+K+A F+ +E+ +S +A + G SQ++IV+ + +G +G+ Sbjct: 5 LVRLREVYDSLNPSERKVAAFILQEPAEMIQMSVADLAVRSGSSQAAIVRLCKTMGFKGY 64 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 +L++ + G+ + I +DS+ I + ++ ++ T +++ Sbjct: 65 QDLKLKVAGDLQE-------PLATGYQDIRPNDSISAIIQNVSNNNIQSIRDTMKIMEEG 117 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 +++ + + ++ I + G+G S L+G D K ++I D HVQ T + L Sbjct: 118 MVEEAVLALDQSKRIFMFGVGASNLIGMDAQQKFLRINKVCISFPDPHVQLTSAVLLTPD 177 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 D + ISYSG E++ A A+++G I IT DS L R L T S E E RS Sbjct: 178 DAAVCISYSGETDEVIRAAAIAKEKGCKTIGITKYGDSTLSRSVDIPLYTSSTENEIRSG 237 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 +MS+R Q ++ D+L++G+ N S+K + S +RL Sbjct: 238 AMSSRITQLNLIDILYLGVASRNYENSVKYLDESRRAIKRL 278 >UniRef50_C0ZD50 Transcriptional regulator n=32 Tax=Bacillales RepID=C0ZD50_BREBN Length = 288 Score = 296 bits (760), Expect = 4e-79, Method: Composition-based stats. Identities = 83/280 (29%), Positives = 143/280 (51%), Gaps = 6/280 (2%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 LT++ ++ + EQ+IAD++ + SE+ S ++A Q + +++ + ++LG +G Sbjct: 11 VLTQLRAIYTQLSGKEQQIADYILEHASEIIHFSITELADQCQCADATVFRLCRRLGFRG 70 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 + ++AL E + ++ + DD + IA K+ + T +++ Sbjct: 71 YQAFKIALASEVTNPKQTIHQEINL------DDDDVSAIAEKIFTANIETIRDTQQIINK 124 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 L KI+ + A I+ G GGSA++ +D K M+ G +D H Q + L K Sbjct: 125 DELMKIVSCLENASRIEFYGSGGSAVIAQDAYHKFMRTGIPCLYHSDAHYQVMSASLLTK 184 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 G V + IS+SGS K+I+ + A++ GA I ITS SPL RLA L T S ET +R+ Sbjct: 185 GAVVVGISHSGSNKDILAALQVAKEAGAKTIGITSYGKSPLVRLADMCLYTTSRETVFRT 244 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 ++S+R AQ S+ DLL+V + +++ IQ E Sbjct: 245 EALSSRLAQLSLIDLLYVAVSLRRQEDTIANIQHIREAIS 284 >UniRef50_Q8RD36 Uncharacterized HTH-type transcriptional regulator TTE0211 n=3 Tax=Clostridia RepID=Y211_THETN Length = 282 Score = 294 bits (754), Expect = 2e-78, Method: Composition-based stats. Identities = 89/284 (31%), Positives = 148/284 (52%), Gaps = 7/284 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L I S FT +E KIA ++ N + + +S ++A S++SI++F + +G + Sbjct: 3 DVLAVIREMSSSFTPSEAKIAKYILENPTVVTELSVNELANACDTSEASIIRFCRTIGLK 62 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF EL++ + + K L ITS+D + + +K+ + A++ T A+L+ Sbjct: 63 GFQELKIKIAVSLAKQTRK-------LDGGITSEDDVMAVIQKIANFNKQAIDSTIAVLN 115 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L K E ++ A I G+ S +V D K +I DTH+Q T + LK Sbjct: 116 AEELTKAAEALANANKIDFYGVAASGVVAYDAMLKFSRINIPCTAYQDTHLQLTSAVNLK 175 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 KGDV ISYSG+ KEIV + A++ GAT I++T SPL + A L S E +R Sbjct: 176 KGDVAFGISYSGATKEIVEAIQTAKEAGATTISLTKYGQSPLAKAADINLFVSSEEAMFR 235 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + +M++R AQ +V D+LF+ + Q + ++ ++ +SE+ K Sbjct: 236 AGAMASRIAQLTVIDILFILVAQKKYNDVVRYLENTSEVLSMRK 279 >UniRef50_A1HSQ6 Transcriptional regulator, RpiR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSQ6_9FIRM Length = 287 Score = 292 bits (749), Expect = 8e-78, Method: Composition-based stats. Identities = 84/279 (30%), Positives = 157/279 (56%), Gaps = 7/279 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L +I + T+ EQK+AD++ N +++ +S ++A+ G ++++I + QK+G +G+ Sbjct: 12 LPRIRSIYKALTKAEQKVADYILENAAKVVHLSITELAEVSGSAEATIFRLCQKVGYRGY 71 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 ++AL G+ A ++ + + DS+ VIARK+ + L+ T ++D A Sbjct: 72 QHFKIALAGDL-------YTPAELVYKDVNAGDSMGVIARKVFHDINEGLQDTLKIIDEA 124 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L K + I+KA I G GSA++ D+ ++ M+ G V AD H+Q + ++ G Sbjct: 125 ALDKAVAAITKARRIDAYGSAGSAVIAADIEYRFMRFGIPVRAYADPHMQIISAALMQPG 184 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 D+ IA+S++G+ ++++ A++ GATVIAITS SPL +LA TL + ETE+RS Sbjct: 185 DLAIAVSHTGANRDLLDSVAMAKQNGATVIAITSYMKSPLSKLADITLCGSAKETEYRSE 244 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 +M+ R ++ D L+VG++ ++ +++ + Sbjct: 245 AMAARLVHLAIVDALYVGVMLDRQDCIVENMEKIRKAIA 283 >UniRef50_B8E0M8 Transcriptional regulator, RpiR family n=2 Tax=Dictyoglomus RepID=B8E0M8_DICTD Length = 281 Score = 289 bits (740), Expect = 8e-77, Method: Composition-based stats. Identities = 88/280 (31%), Positives = 146/280 (52%), Gaps = 7/280 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L KI F ++E+K+A+++ A E+ + ++A+++G+S+++IV+ +KLG + Sbjct: 4 SILEKIKEQKESFRDSEEKVANYILARWQEVLHLPITELAERIGVSEATIVRMCKKLGLR 63 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF EL++AL E +H ++ D LE I +K+ A+E T ++ Sbjct: 64 GFQELKIALATE-------KIQPIKTVHQAVQEGDDLETILKKVFSANIRAMESTLNVIS 116 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 +++ I+ I A +QI G+GGS V D K MK G D+H+ A + L+ Sbjct: 117 VKEIERAIDAILNARQLQIYGVGGSGPVALDAQHKFMKTGIPTVAYIDSHMMAMSASILE 176 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV I IS SGS K+I E A+ +GAT I IT +PL R+ L S ET +R Sbjct: 177 PQDVVIGISASGSSKDIFEALELAKNRGATTIGITHYAKTPLDRVLDIKLSVSSEETFYR 236 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 + S S R AQ S+ D L++G+ + ++ ++ + E Sbjct: 237 TESTSARIAQLSIIDTLYIGVALKRLDKMIENLKLTREAI 276 >UniRef50_C6Q8T9 Transcriptional regulator, RpiR family n=1 Tax=Thermoanaerobacter mathranii subsp. mathranii str. A3 RepID=C6Q8T9_9THEO Length = 282 Score = 288 bits (739), Expect = 1e-76, Method: Composition-based stats. Identities = 88/284 (30%), Positives = 145/284 (51%), Gaps = 7/284 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 LT I + F +E KIA ++ N + +S ++A+ S++SIV+F + +G + Sbjct: 3 DILTVIKELEATFKPSEAKIAKYILDNADVVTELSINELARACDTSEASIVRFCRTIGLK 62 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF EL++ + S +K L IT DD + + +K+ + A++ T +LLD Sbjct: 63 GFQELKIKIAVSLSKQTKK-------LDGGITDDDDVSDVIQKIANFNKQAIDNTISLLD 115 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + K ++ +S A I G+ S V D K +I DTH+Q T + LK Sbjct: 116 VKSIIKAVDALSNANKIDFYGVAASGTVAYDAMLKFARINIPCTAYQDTHLQLTSAANLK 175 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 KGDV ISYSG +EIV E A++ GAT I++T PL ++A L S E +R Sbjct: 176 KGDVAFGISYSGCTREIVEALEVAKEAGATTISLTKFGQFPLVKVADINLFVSSEEPLFR 235 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S + ++R AQ +V D+LF+ + + + +K ++ ++E K Sbjct: 236 SGATASRIAQLTVIDILFILVAKRKYNDVVKFLENTTEALSIRK 279 >UniRef50_C6J1X3 RpiR family transcriptional regulator n=2 Tax=Bacillales RepID=C6J1X3_9BACL Length = 289 Score = 287 bits (736), Expect = 2e-76, Method: Composition-based stats. Identities = 77/286 (26%), Positives = 143/286 (50%), Gaps = 7/286 (2%) Query: 1 ML-YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLG 59 M L +S+ + E+K+ +++ + + + ++A GIS S++ +F + Sbjct: 1 MTPILHAVSSHLETLSPQERKLGEYILESPATVIHQGITELANACGISPSTVTRFCKTFH 60 Query: 60 AQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCAL 119 +GF + +M L E + + A + + I + + L+ I + ++ T L Sbjct: 61 FKGFPDFKMKLASELA------HKPAENHYQDIIAGNDLQKIVEAMEANHLASITDTTRL 114 Query: 120 LDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQA 179 LD +L + +E + +A I + G+ S++V +D KL++IG AD+H+Q T + + Sbjct: 115 LDMNQLSRAVEALCRAKRIDLYGVATSSIVAQDFYQKLVRIGKNCTAFADSHMQITSASS 174 Query: 180 LKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETE 239 L +GDV +AISYSG E + A+ GAT +++T + + L LA L + S E Sbjct: 175 LGEGDVALAISYSGETPETIDALRCAKDSGATTLSLTQYSSNSLASLADIALFSSSLEEG 234 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 R M++R AQ V D+LF G+V L + + ++ S + Q + Sbjct: 235 MRRGDMASRIAQLHVIDILFTGMVSLEFQDFIPKLESSYQNVQIYR 280 >UniRef50_C0ZJF9 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZJF9_BREBN Length = 297 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 78/284 (27%), Positives = 146/284 (51%), Gaps = 7/284 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L I + FT++EQK+A + + S +A++ G+ ++++++F +K+G Sbjct: 20 NTLLHIQSLLPSFTKSEQKVAHIVLQQTDSVIYSSVIDLAEKAGVGETTVLRFCRKIGFH 79 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ E ++AL E +LH + DDSL++I K+ + A+ T AL Sbjct: 80 GYQEFKLALAQELVN-------PVKNLHGEVGEDDSLDIITHKVTATNQQAIGDTSALFQ 132 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 +L++ ++++ KA I G+G SA+ +D + ++IG RV ++H+QA + L Sbjct: 133 LEQLERCVDLLQKANTIHFYGVGTSAVTAQDAKYTFLRIGLRVDAFNESHLQAMAAATLG 192 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 GDV I +S SGS K+ + + A++ GA I +T SP+ +A TL T + E + Sbjct: 193 PGDVAIGLSVSGSTKDTIDSLKVAKQAGAACICLTHYRRSPITNVADITLLTAAQEGPLQ 252 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S++ + AQ V D++ + N ++L +R+++ K Sbjct: 253 GGSLAAKIAQLHVLDVISTTITMRNKEKALLYKERTAKAVLERK 296 >UniRef50_UPI000196C77F hypothetical protein CATMIT_02718 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C77F Length = 277 Score = 286 bits (734), Expect = 4e-76, Method: Composition-based stats. Identities = 78/284 (27%), Positives = 147/284 (51%), Gaps = 9/284 (3%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M +T+I A TE E++IA ++ + ++ S+ ++ ++ S +++V+FA+KLG Sbjct: 1 MSCITRIKEA--SLTETEKEIAQYIIEHPEQVLDDSAMKLGEKTHSSSAAVVRFAKKLGY 58 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF +L++ L + S + + + D+ + + K++ + + +++T LL Sbjct: 59 SGFPQLKIELAKDLVGSIPEVDNL-------LHPDEDMATLMNKVHHSQIVTIDKTYHLL 111 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + L+ +++ + +A + + G+GGSA+V D KLM+IG D H+Q T + Sbjct: 112 SASTLEDVVKALEQAKHVYLFGVGGSAIVCDDFIHKLMRIGKYACFYPDVHLQMTSVPNM 171 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + D+ I +SYSG K IV A+ A++ +AIT + L +L L S E Sbjct: 172 TEEDLAIFVSYSGETKGIVTAAKWAKEMNIPSVAITQSAYNKLGKLVDHVLTIPSQEQSL 231 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 R +MS+R + V DLL+ GLV+ N + + I + + Q + Sbjct: 232 RIGAMSSRYSSLIVVDLLYYGLVKRNKEKYAQKIINTRRIIQEM 275 >UniRef50_C4L752 Transcriptional regulator, RpiR family n=4 Tax=Bacillales RepID=C4L752_EXISA Length = 282 Score = 286 bits (733), Expect = 6e-76, Method: Composition-based stats. Identities = 83/285 (29%), Positives = 151/285 (52%), Gaps = 7/285 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M +I A S ++ EQ+IAD++ ++ + Q+A L +++S++ +F Q++G Sbjct: 4 MNGTARIRGAYSTLSKKEQRIADYILKQPEQIIHHTINQVADDLDVAESTVFRFCQRVGF 63 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +G+ L++AL + A +H IT D+ IA K+ +E T +L Sbjct: 64 KGYQALKIALASDVV-------APLQDIHEDITETDTALEIAEKIFSTNGKTIESTRQIL 116 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + L+K +E+ A I+ G GGSA+V D K ++ G +V+ ++H+Q + L Sbjct: 117 EGVSLEKAVELFLGARRIEFFGSGGSAVVALDAYHKFVRSGLQVSAMLESHMQLMSASQL 176 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 DV + IS+SG+ KE + A+ +++G +IAIT+ SPL ++A +L TVS ET + Sbjct: 177 TTADVAVVISHSGASKETLDIAKLLKEKGVPMIAITNYAKSPLSKIADVSLYTVSQETAF 236 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 RS ++++R A+ S+ D LF ++ + +Q+ E + Sbjct: 237 RSEALASRIAELSLIDALFTAVMMRRGEAARTSLQQMREAISMRR 281 >UniRef50_A8FJ30 Possible RpiR family transcriptional regulator n=51 Tax=Bacillus RepID=A8FJ30_BACP2 Length = 285 Score = 285 bits (730), Expect = 1e-75, Method: Composition-based stats. Identities = 79/282 (28%), Positives = 148/282 (52%), Gaps = 6/282 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 + KI A + IA+ + + ++ +S ++AK+ S+++I + ++LG +GF Sbjct: 9 IEKIRAASRGLPPKLKAIAEHITSEPRDIIHLSIVELAKKTASSEATIFRLCKRLGFEGF 68 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 +L++A+ E ++ ++ ++ DD + V +K+ + AL+ + LL+ Sbjct: 69 QDLKIAIAQEIDQTKPN------YVDEEMSLDDDMAVFMQKVFQTNISALKDSFQLLNPE 122 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 ++K I++I +A ++ G GGS L+ D K M+ G D+H QA + L + Sbjct: 123 DVEKAIQIIHEAKRLEFYGSGGSGLIATDAFHKFMRTGINCIVHTDSHFQAMSAGLLDQH 182 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 I IS+SG K+++ + A+ +GA I ITS SPL +LA TL T + ET +R+ Sbjct: 183 STVIGISHSGRNKDLLDAMKTAKSKGAKTIGITSYQRSPLSQLADVTLYTATQETAFRTE 242 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +MS R AQ +V D+L+ L L E++ +++ E + + Sbjct: 243 AMSARLAQLTVIDVLYFALAHLRQQETITNLKQMRETISQKR 284 >UniRef50_A8S9N1 Putative uncharacterized protein n=3 Tax=Bacteria RepID=A8S9N1_9FIRM Length = 321 Score = 285 bits (730), Expect = 1e-75, Method: Composition-based stats. Identities = 77/277 (27%), Positives = 139/277 (50%), Gaps = 4/277 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L ++ + E++IA F+ N E +++ R +A++ S SS+V+ + +G Q Sbjct: 36 NVLLRLREVQPSLSSTERQIAQFILENPDETTTLTIRDLARRSFSSPSSVVRICRVIGFQ 95 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ ELR AL E + E + H IT DSL+ I K+ + +L T LL Sbjct: 96 GYKELRHALTLELATLGENGS----HREKDITPQDSLQEIVDKVTHKNIQSLLDTQRLLL 151 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L++ +E+I+ A + + G+G S V +D K +++ D+H Q ++ Sbjct: 152 LDELEQCVELIANARTVLLFGIGSSLCVAKDTYLKFLRLDKPCVVNEDSHSQLLQARNAT 211 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV I SYSG E++ C + + GA VIA+T S + +LA L + E+ +R Sbjct: 212 AQDVGIVFSYSGQTMEMIQCIKEMKAGGAPVIAVTRYYPSEVAQLADHVLYVAANESLFR 271 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSS 278 + +MS+R +Q +V D+L+ N ++++ + ++ Sbjct: 272 NGAMSSRLSQLNVVDILYTAYASRNHEDTMRRLTKTH 308 >UniRef50_C0CSK7 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CSK7_9FIRM Length = 282 Score = 284 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 85/281 (30%), Positives = 147/281 (52%), Gaps = 7/281 (2%) Query: 5 TKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFT 64 I + T E+KIA+++ N ++ + + ++A+ +S +S+V+F + LG +G+ Sbjct: 8 EIIRGRMNYLTNTERKIANYVLENYDQVLNSNITELAENAKVSDASVVRFCRSLGYKGYQ 67 Query: 65 ELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYAR 124 + ++ + + HL+ + DS ++I K+ + LE+T A L+ Sbjct: 68 DFKINAAKDVLPREK-------HLNPILEESDSPDMICHKIFNLEISVLERTLASLNMRE 120 Query: 125 LQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD 184 ++K + I + G GGS LVG+D K MKIG +V D +Q S +GD Sbjct: 121 VEKAAQFIFHGKRVLFFGSGGSLLVGQDALHKFMKIGVQVYVHEDRDLQLMASSLAGEGD 180 Query: 185 VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSS 244 V I IS+SGS ++ C + A++ GA IA+ S +PL ++A +DT S ET ++S S Sbjct: 181 VVIGISHSGSNYSVLRCLKNAKENGAQTIALVSRGKTPLSKIADVVIDTASEETIFQSES 240 Query: 245 MSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +STR AQ ++ D L + +N ES + IQ++ + T K Sbjct: 241 VSTRIAQLAIIDSLVSIVAFMNYDESYRAIQKTRKATSENK 281 >UniRef50_Q97MK5 Uncharacterized HTH-type transcriptional regulator CA_C0191 n=5 Tax=Clostridia RepID=Y191_CLOAB Length = 283 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 80/279 (28%), Positives = 147/279 (52%), Gaps = 5/279 (1%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L +I ++ +E+KIA+++ N + +S +++A + G S+S++V+ + L +G+ Sbjct: 5 LIRIKEIINDLNPSERKIAEYILNNSKAISDLSIKELAGKSGSSKSAVVRLCKILNYKGY 64 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 E R+A+ + ++ N ++ I D L I + ++ + +++ T +L Sbjct: 65 KEFRIAIAKDTVNVDKEENR-----YTDINPKDDLHTIIKNISYNNKKSIDNTMEVLSEE 119 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 ++K E ISKA + G+G S +V D K M+I V DTH+Q + LKKG Sbjct: 120 LVEKASEAISKAYRVDFYGIGASYIVAMDAFQKFMRINKNVRATPDTHLQVEFASNLKKG 179 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 DV +AISY+G K+ +AA++ GAT I++T + + L L +S E +RS Sbjct: 180 DVAVAISYTGETKDTFESIKAAKEAGATTISVTKFGSNSISDLCDINLFVLSPEITFRSG 239 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 +MS+R AQ +V D+LF + E + ++ + + T+ Sbjct: 240 AMSSRIAQLNVIDILFTSVAGRMFEEVKEFLENTRKSTR 278 >UniRef50_C6D7K6 Transcriptional regulator, RpiR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7K6_PAESJ Length = 284 Score = 281 bits (721), Expect = 1e-74, Method: Composition-based stats. Identities = 74/281 (26%), Positives = 136/281 (48%), Gaps = 5/281 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + I + + FT E+K AD++ + + +S +A+ G+ ++SI +F + LG + Sbjct: 5 SITSTIHSHYNRFTATEKKTADYILEHADAVVYMSITDLAEGCGVGEASIFRFCKALGFK 64 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ + ++AL SA E L + D+LE K + AL +T L+ Sbjct: 65 GYQQFKIALAHSISADNE-----IPQLSGQVKIQDTLEDAVSKTLQSNINALNETFKLIQ 119 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + + I+++ ++ G+G S + + + K M+I + C D+H QA + + Sbjct: 120 LDSINRAIDLLIRSDRFIFYGVGSSLMTAMEANNKFMRITNKTGCSVDSHQQAMSAALMG 179 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 + DV I ISYSGS K+ + A+ A+++GA +I IT SPL + TL + E + Sbjct: 180 ERDVAIIISYSGSTKDSIEVAKKAKERGAAIIVITRFVKSPLTSYSDITLLCGANEGPLQ 239 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 S+S + AQ + D+L+V + S+ + +S Sbjct: 240 GGSLSAKIAQLYLLDVLYVEYFKRTYEASIVNKENTSAAVA 280 >UniRef50_D2AR91 Putative transcriptional regulator, RpiR family n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AR91_STRRD Length = 299 Score = 281 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 75/283 (26%), Positives = 132/283 (46%), Gaps = 5/283 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + + T Q IA + + + + + + G S+++IV+ A+ LG Sbjct: 11 NLVATVRAVLPSLTPAAQAIARLILDDPGMVARSTITEFSAVSGTSEATIVRTARALGFA 70 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+++LR AL + + + DD L + K+ R + AL T A L+ Sbjct: 71 GYSQLRFALAAAVAR-----EEPERLVPGDLGPDDPLTDVIAKVTRAESEALADTAAQLN 125 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 RL ++E ++ A + + G+G S LV D++ KLM+IG D H+ T + L Sbjct: 126 PDRLGAVVEAMTAARRVDVYGVGASGLVAADMAQKLMRIGRSSHAFTDAHLALTSAALLG 185 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 +GDV + +S +G +++ ARK GAT +AIT+ S L LA L + ET +R Sbjct: 186 EGDVTVGVSCTGETPDVIAPMRVARKAGATTVAITNNPRSSLAELAEHVLVSAGRETAFR 245 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 ++++R +Q + D +FVG+ Q S ++ + Sbjct: 246 PGALASRISQLLIVDCIFVGIAQRTFETSDAALRATRGALDEF 288 >UniRef50_A8LV24 Transcriptional regulator, RpiR family n=7 Tax=Actinomycetales RepID=A8LV24_SALAI Length = 320 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 74/283 (26%), Positives = 137/283 (48%), Gaps = 2/283 (0%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 L ++ + T +++A+ + ++ + ++A++ G S ++I +F + +G +G Sbjct: 33 VLARVRAGADDLTGALRRVAEHVLSDPEAAARATIVELAERSGTSPATITRFCRAMGFEG 92 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 + +LR+ + E R + + + I D L + ++ A+ T ALLD Sbjct: 93 YADLRLGIAAE--TGRARLAGWTVDIGREIQPGDPLRRVLDQIIAADTRAMHDTAALLDL 150 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 A +++ I+ A + I G GSALVG ++ F L +IG +D H + L+ Sbjct: 151 AEVERAAVAIAGASRVNIFGASGSALVGEEMQFMLHRIGVAAWAWSDVHEGLASAALLRV 210 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 GDV + +S+SG +E + A +GAT +A+T SPL LA L T S T +R Sbjct: 211 GDVALGVSHSGQTRETIEMLAEAGSRGATTVAVTGFPRSPLAELADIALLTASRATTFRP 270 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 ++S R Q V DLL++ + Q + ++R+++ K Sbjct: 271 DALSARHPQLVVLDLLYIAVAQRTHDRAHAALRRTAQAVDGHK 313 >UniRef50_C6J4B4 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J4B4_9BACL Length = 288 Score = 281 bits (719), Expect = 2e-74, Method: Composition-based stats. Identities = 72/281 (25%), Positives = 130/281 (46%), Gaps = 4/281 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L KI + T E+ +A+++ AN ++ +S + +AK S +S+++F + +G Sbjct: 7 NILIKIRDMKENLTPVERMVAEYILANTEDIPHLSIKSLAKLSKTSDASVLRFCKTMGYS 66 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ +++ + + ++ I D L+ I ++R ++E T ++LD Sbjct: 67 GYRSFIVSISAALGSM----DDERKDQYTDIQPGDDLDTIIANISRNNMKSIEDTLSVLD 122 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + + ++ + + I G+G S LV +D K +I D H Q T + L Sbjct: 123 RGEVARAVKALRASNRIVFFGIGASGLVCQDGEQKFSRINKMCHSYTDGHSQLTAATLLG 182 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 KGDV I +S SG+ EI+ E A+K AT +AIT S L A L + E R Sbjct: 183 KGDVAIFVSNSGNTLEIIETLEIAKKNNATTVAITKYNKSELADKADILLGISTPEITMR 242 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 S +M +R A ++ D+LF G+ K + ++ + Sbjct: 243 SGAMGSRIAMLTIIDMLFAGVASAEYQNVKKYLTKTHSILA 283 >UniRef50_A7GD47 Transcriptional regulator, RpiR family n=10 Tax=Clostridium RepID=A7GD47_CLOBL Length = 281 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 91/285 (31%), Positives = 156/285 (54%), Gaps = 6/285 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L +I T++E+KIA+++ + ++ S S++++A + S +SI++F +K+G Sbjct: 1 MGVLLRIRENFDSMTKSEKKIAEYIFKSPKDIISDSAQEIAIKTSTSPASIIRFTKKVGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 E + AL+ E + + I +DS++ I KL + + T L+ Sbjct: 61 NSLNEFKFALVAE------EYTKESTEFDYIINYNDSIDSIINKLGNKVIDTINDTKELV 114 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D +L + ++ I A I + G+G SA+V D +KL++I +V + D+H+Q VS + Sbjct: 115 DDEKLLEAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMFQQDSHLQLAVSVHI 174 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 DV +AISYSG+ +E+ L E A+K GAT IAIT S L +A L+ S E + Sbjct: 175 TNRDVAVAISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDL 234 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 R ++S+RT+Q VTD LF+G+ + N ++ K + + L + LK Sbjct: 235 RIGAISSRTSQLFVTDSLFLGIAKENLDKTEKNLINTRNLVEVLK 279 >UniRef50_C0Z7S3 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z7S3_BREBN Length = 288 Score = 280 bits (718), Expect = 4e-74, Method: Composition-based stats. Identities = 76/279 (27%), Positives = 154/279 (55%), Gaps = 6/279 (2%) Query: 7 ISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTEL 66 + + +E+K+AD++ A+ ++ +S +++A+ G+S+++I++ A+ L +G+ EL Sbjct: 12 LQAILDQLKPSERKVADYILAHPEDVVKLSVQKLAEYSGVSEATIIRLARSLNMKGYQEL 71 Query: 67 RMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQ 126 ++ + G+ + + + + I + S+E I + ++ +++ T ++L ++ Sbjct: 72 KLRVAGDLTKQTARGS------YQEIMMEGSVESIMQAVSWNNIQSIQDTLSVLSNEEVK 125 Query: 127 KIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQ 186 K ++V+S A I + G+G SA++ D+ K +I +D H Q T + L + DV Sbjct: 126 KAVDVLSVARKIDVYGVGASAVIADDIRQKFSRINLWCEAYSDFHAQLTSAVTLTEKDVV 185 Query: 187 IAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMS 246 I ISYSG ++I+ A++QGAT+I +T SP+ LA+ L T S E RS +M+ Sbjct: 186 IGISYSGQTEDIIQSLTEAKQQGATIITLTKFGPSPVAELANIRLFTSSVEKSIRSGAMA 245 Query: 247 TRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +R AQ +V D+LF+ ++ + ++++S R K Sbjct: 246 SRIAQLNVIDILFITMISRMQERVIPLLEKSRLAVSRTK 284 >UniRef50_C5C2G7 Transcriptional regulator, RpiR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C2G7_BEUC1 Length = 285 Score = 280 bits (717), Expect = 4e-74, Method: Composition-based stats. Identities = 79/285 (27%), Positives = 140/285 (49%), Gaps = 1/285 (0%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M + I + +F + +++A+ + + + ++A Q S+++IV+F + LG Sbjct: 1 MSIQSSIQSRLDQFAPSMRRVAEAILERPQVVLEKTISELASQCETSETTIVRFCRTLGL 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 G+ +LR+ L E + H + I ++D L +A K+ L +E+T A L Sbjct: 61 TGYVQLRLELATEIGRENAQRGELGDH-GADILAEDGLAAMAAKIAFTDTLGIEETLASL 119 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D L+++++ I A G+G S DL KL +IG D H T + Sbjct: 120 DIEHLERVVDAIDTAGRSVTYGVGSSGSSAADLQRKLFRIGRVAFTFDDPHDAVTAAALS 179 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 GDV +A S+SG+ +E + A K GA +A+T+ +S L R A L T ET++ Sbjct: 180 SPGDVAVAFSHSGATREALAFLATAGKHGARTVAVTNSAESALARAADIVLVTSVRETQF 239 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 RS +M++R AQ + D +FVG+ Q +++ ++ + Q L+ Sbjct: 240 RSGAMASRIAQLMIVDCIFVGVAQRRYDQTVDALKSTYAAAQELR 284 >UniRef50_C4V1J5 RpiR family transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1J5_9FIRM Length = 282 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 82/283 (28%), Positives = 150/283 (53%), Gaps = 7/283 (2%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 +L I + T++E+KIA+++ + + + + ++A+++G S +SIV+F + G +G Sbjct: 6 FLQLIEDKLGTLTKSEKKIAEYILEHPNRVVDATITELAERIGTSDASIVRFCKLFGCKG 65 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 + ++ L E ++ L+ ++ D+ I +K+ + L +T +L+ Sbjct: 66 YQNFKIRLAREVVPHYKQ-------LNVALEQHDTALTICQKIFNTEIATLHETLEMLNV 118 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 LQ + + I +A +I++ G GGS++V +D+ K +K+G R D +QA + LKK Sbjct: 119 EHLQTMAQRIREADYIEVFGSGGSSVVAQDIRHKFLKVGIRCTVLLDADIQAMSASLLKK 178 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 GDV I IS++GS K + C + ARK GA VI +T+ SP+ R+A + S ET ++S Sbjct: 179 GDVAIGISHTGSTKSVFHCLKMARKNGAYVILLTTQAKSPIGRIADLVIPVGSKETLFKS 238 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S S R A+ V D + V + + I ++ + T K Sbjct: 239 ESTSARIAELVVMDAVLALAVSDDYKKYNVKITKTRDATSENK 281 >UniRef50_A9KIQ0 Transcriptional regulator, RpiR family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIQ0_CLOPH Length = 284 Score = 279 bits (716), Expect = 6e-74, Method: Composition-based stats. Identities = 69/280 (24%), Positives = 136/280 (48%), Gaps = 4/280 (1%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 +I ++ S+FT++E+ +ADF+ N ++ S +A+ G+ +++ +F + L G Sbjct: 5 IFARIESSYSKFTKSEKIVADFVFENPEKVLYTSITDLAEICGVGDTTVFRFCKALKLNG 64 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 + E +M L + + + ++ S++ DD ++ I +K AL +T L++ Sbjct: 65 YQEFKMFLAQDIAVR----TGSDYTINGSVSQDDDIQTICKKALAVDIAALTETFEGLNF 120 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 + K++++IS A +Q G+G S ++ + K M+I V AD H+Q + L Sbjct: 121 EAVTKVVDMISNANKVQFFGMGSSGVIALEAKMKFMRILPNVEHIADCHMQFMSAALLSS 180 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 D+ I SYSGS K+ + A A+ G V++IT +S L ++ + S E Sbjct: 181 RDLAIIFSYSGSTKDSIEIANLAKSNGCKVVSITRYVNSHLANISDVVIPCGSNEGPLDG 240 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 + ST Q + D+L++ + +S +++E Sbjct: 241 GASSTSMVQFYILDILYLLYFTKHYHQSKLNKAKTTESIS 280 >UniRef50_C4G9W4 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G9W4_9FIRM Length = 280 Score = 278 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 67/280 (23%), Positives = 138/280 (49%), Gaps = 9/280 (3%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L + + ++ T E+KIAD++Q N ++ +S ++A++ ++ +S+ +F + +GA+ Sbjct: 5 NVLLSMQLSYNQLTRTEKKIADYVQKNAQKVLFMSITELAEECHVADASVHRFCRTIGAK 64 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ E +M L + + + I +++ + A+ +T LLD Sbjct: 65 GYQEFKMWLSINMGHEKGEEESEEEDGKEP---------IFQQVLKSHLEAINETNQLLD 115 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 ++ + + ++++A I G+G S + + K + + +V C DTH+QA + + Sbjct: 116 KEKVDQAVRMLTEARQIMFFGVGDSKTAAIEANNKFLHVTPKVMCAGDTHLQAMAASMMT 175 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 + D+ +SYSGS K+ V A+ A++ GA VI+IT SPL + L S E Sbjct: 176 EEDLLFVVSYSGSTKDTVEVAQIAKEAGAKVISITRFLKSPLTEFSDCVLICGSKEGPLE 235 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 SM + +Q + D+L+ + N ++ + Q+++ Sbjct: 236 GGSMGAKLSQLHIIDILYQCYFKANGKKARENRQKTANAV 275 >UniRef50_A0KFB6 Transcriptional regulator, RpiR family n=3 Tax=Gammaproteobacteria RepID=A0KFB6_AERHH Length = 286 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 121/284 (42%), Positives = 189/284 (66%), Gaps = 1/284 (0%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 ML L+KISN S+ + +E KIAD++ A ++ SS+++A+Q +SQSSIVKF QK+G Sbjct: 1 MLTLSKISNIRSQLSPSELKIADYILACPEQVTHFSSQELAQQADVSQSSIVKFTQKIGF 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GFT ++A+ + L++ I DD LE +A+KL +EK ++ +T L Sbjct: 61 KGFTAFKLAVSEDLGRKHAIKTDNVGDLYNGIGRDDDLETMAKKLAQEKINSIVETTQAL 120 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D A L ++++VI++A +Q+ G+GGSAL +DL +KL+KIG D+HVQ +++Q L Sbjct: 121 DNATLARVLDVINQAGRVQLVGIGGSALTAKDLWYKLLKIGVTTLFAQDSHVQISIAQTL 180 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 GDVQ+ +SYSG+ ++++ AE A++ GAT+IA+TS ++PLR++A LDTV+ E E Sbjct: 181 GPGDVQLVVSYSGASRDVLAAAELAKRNGATLIAVTSFRNTPLRQMADMVLDTVADENEL 240 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 R SS+S+RTAQN++TD+LF+GLVQ E+ +I + RL Sbjct: 241 RISSISSRTAQNTITDILFLGLVQRR-DEAWALIDGTRGAIDRL 283 >UniRef50_Q4LA29 Similar to transcriptional regulator n=1 Tax=Staphylococcus haemolyticus JCSC1435 RepID=Q4LA29_STAHJ Length = 283 Score = 278 bits (711), Expect = 2e-73, Method: Composition-based stats. Identities = 73/282 (25%), Positives = 145/282 (51%), Gaps = 5/282 (1%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L I ++ S+ +E+++A+++ + E+ + S +++A +S +++V+ ++KL +GF Sbjct: 5 LIIIESSLSDLNPSERRVAEYILEHPDEIINYSVQKLADLTNVSVATVVRLSKKLKCKGF 64 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 +L++ + + + ++ I D S+E + + + L T +L Sbjct: 65 QDLKLKIAYDLNEP-----GNIQRGYAEIDKDYSIEEVTQTVFHNNTKTLRDTERILSTE 119 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 ++ E+I + I G+G SAL+ +D KL +I Y + Q T+S L Sbjct: 120 NIKHAFELIVNSRKTCIYGIGASALIAQDFKQKLTRIDYWCDVGSSFDEQVTLSANLSSE 179 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 DV IAIS SG K+IV + A+++GA VI+IT D+P+ L+ L S E RS Sbjct: 180 DVVIAISSSGQTKDIVNSTQLAKEKGAKVISITKYGDNPISNLSDVQLFVSSSEKAKRSG 239 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +MS+R A S+ D+L++ + + + + + ++ + + + K Sbjct: 240 AMSSRIAMLSIIDILYICIASNDYLSNRQKLENTRKAIKNNK 281 >UniRef50_B6ITC5 HTH-type transcriptional regulator hexR, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6ITC5_RHOCS Length = 280 Score = 278 bits (711), Expect = 2e-73, Method: Composition-based stats. Identities = 72/283 (25%), Positives = 128/283 (45%), Gaps = 8/283 (2%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 L +I + +EQKIAD + + + S ++A +SQ ++V+F + +G G Sbjct: 1 MLDRIRSMRPGLRRSEQKIADIVLRQPHAVVNASVAELAHDADVSQPTVVRFCRSIGCSG 60 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 + + ++ L + +A + + DD + IA KL AL + L+ Sbjct: 61 YQDFKLRLAQDLAAGPARPEDA-------VRPDDPVAEIAAKLLNRSIGALTRLRNQLNP 113 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 L+ ++V+++ + G G S +V D K ++G V D+HVQA + L Sbjct: 114 DALEAAVQVLTETRRLDCYGFGASGVVALDAQNKFFRLGLPVVAHTDSHVQAMAAALLGP 173 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 V +A+S SG +E++ + A GA VIAIT+ SPL A L + E Sbjct: 174 QGVALAVSRSGRTRELLRSVDLALAGGARVIAITA-GGSPLAGRATVPLLVDAPEDSSPY 232 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + M++R A +V D+L V V + ++R + + + Sbjct: 233 TPMTSRIAHLAVVDILQVATALRRGVHTGDPLRRPAAALRDDR 275 >UniRef50_UPI0001693BD8 YbbH n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001693BD8 Length = 265 Score = 277 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 74/265 (27%), Positives = 134/265 (50%), Gaps = 6/265 (2%) Query: 21 IADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASREK 80 +A ++ + E+ S+ ++A++ S ++I +F + L QGFT+ ++ L GE + Sbjct: 2 LASYIVEHAHEVVSMGITELAERSQTSPATISRFCKSLHFQGFTDFKLKLSGELAKQ--- 58 Query: 81 TNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPFIQI 140 + H + I + + L I + ++ T L D +LQ+ + + A I + Sbjct: 59 ---PSEHSYQDIVAGNPLSEIVSAIEANHLRSIADTTQLNDIKQLQQAVSALKNARQIDL 115 Query: 141 TGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVL 200 G+ S +V +D KL++IG R + +D H+Q T + L + DV AISYSG +E + Sbjct: 116 YGVATSGIVAQDFYQKLVRIGKRTSVFSDPHMQITSASNLGENDVVFAISYSGDTEETIQ 175 Query: 201 CAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDLLFV 260 A+++GA I++T +PL L+ L + E R M++R AQ V D+LF Sbjct: 176 ALRCAKERGAVTISLTKFGTNPLANLSDIRLFASTLEEGMRRGDMASRIAQLHVIDILFT 235 Query: 261 GLVQLNDVESLKMIQRSSELTQRLK 285 LV E + ++RS +L ++ + Sbjct: 236 SLVSEEFDELIPRLERSYQLVRKYR 260 >UniRef50_B5I8T9 Sugar isomerase n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I8T9_9ACTO Length = 312 Score = 277 bits (709), Expect = 3e-73, Method: Composition-based stats. Identities = 72/280 (25%), Positives = 142/280 (50%), Gaps = 1/280 (0%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 T I + +K+ + + + + + S+ ++ ++ G SQ+++ +F + +G + Sbjct: 23 DVTTLIRTELPRLAGSLRKVGELILEDPAAVTHCSAAELGRRTGTSQATVTRFCRAIGLE 82 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 + L + L E E ++ + + I+ DDSLE + + + A++QT +D Sbjct: 83 SYQHLLIELAQERGRG-EVSDWGSAEIGPDISPDDSLERVVQVVGSADLRAIQQTIERID 141 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L++ + ++KA I + G+GGS V ++ +L +IG +V + H AT + L Sbjct: 142 LDALERAAQALAKARRIDVYGVGGSGAVAQETETRLFRIGCQVRGWTEVHGAATSAALLT 201 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV I IS+SG+ +E + E A+++GAT IAIT+ SPL + A L + + ET +R Sbjct: 202 PADVAIGISHSGATRETLEPFEMAKERGATTIAITTDPRSPLAKAADIRLISATSETSFR 261 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 + S+ R + + D L+V + Q+ + + + +T Sbjct: 262 TGSIGGRHSVLMIVDCLYVRVGQVAYQRASASLALTDHIT 301 >UniRef50_C2D8M2 Possible transcriptional regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D8M2_9ACTN Length = 291 Score = 276 bits (706), Expect = 9e-73, Method: Composition-based stats. Identities = 66/277 (23%), Positives = 132/277 (47%), Gaps = 4/277 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + ++ E+ +A ++ E +S + +A + +S +++V+ + +G + Sbjct: 3 NIIIRLRENIGFLNPAEKAVARYVLQCPHESNRLSVKALAARSFVSPAAVVRMCKSIGFE 62 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF E + L E + + I +D+LE I +K+ + +L L+D Sbjct: 63 GFKEFKTELTRELATEK----LILPLDTKDIKQNDTLESIIKKITLKNIHSLYDALRLID 118 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 ++K +E++ I + GLG S + +D + K +++ D H+Q ++ Sbjct: 119 PETIEKAVELLQACDRILLFGLGASLIAAKDANLKFLRVNKTCLINDDWHLQLITARNST 178 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV I ISYSG E + CAE + +IAIT +SP+ +LA L T S E+ +R Sbjct: 179 SQDVGIVISYSGQTAETLTCAEILKHNNTPIIAITRCIESPISKLADVLLYTTSNESLFR 238 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSS 278 S++MS+R +Q ++ D+L+ + ++ + ++ Sbjct: 239 SAAMSSRISQLNIIDILYTAFAVSDYEKNFTYLSKTR 275 >UniRef50_B2TJ91 Transcriptional regulator, RpiR family n=1 Tax=Clostridium botulinum B str. Eklund 17B RepID=B2TJ91_CLOBB Length = 285 Score = 276 bits (706), Expect = 9e-73, Method: Composition-based stats. Identities = 75/282 (26%), Positives = 130/282 (46%), Gaps = 7/282 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L +I+N SE E+K+A ++ N + S ++A+ S++++ + KLG +G+ Sbjct: 10 LERITNIYSELKGAEKKVAQYVLENPKNIIHFSITELAEVSKASEATVFRLCSKLGYKGY 69 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 +L++ L G +++ + +D +I RK+ ++E T + Sbjct: 70 QDLKINLAGSVIE-------PIDNIYEEVKENDDTYIIMRKIMSSNINSIESTLKINKTE 122 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L K I +I A I G+GGS + D K ++ G D+H Q S G Sbjct: 123 DLDKAIAIILNAKKIMFFGMGGSWTIANDAYHKFIRTGIDCVASCDSHWQVMFSSMANSG 182 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 D IA S SGS KE+V A+K+G +IAIT SPL +++ L E+ +RS Sbjct: 183 DAIIAFSNSGSNKELVENINLAKKRGIKIIAITGNEKSPLAKISDLHLIAYGNESMFRSE 242 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +M +R + D L+VG+ ++L ++R + Sbjct: 243 AMESRLTSLMIVDWLYVGVAIKRKDKTLGNLERIRNGIASKR 284 >UniRef50_C5CIM2 Transcriptional regulator, RpiR family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CIM2_KOSOT Length = 283 Score = 275 bits (705), Expect = 9e-73, Method: Composition-based stats. Identities = 92/283 (32%), Positives = 147/283 (51%), Gaps = 7/283 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L I FT+ E+KIA F+ N ++ +S +++ L +S+ SIV+F QKLG Sbjct: 6 NVLLTIETLKDSFTKTEKKIATFVVKNPQKVVYMSLTEVSDILKVSEGSIVRFCQKLGYT 65 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF ++AL S ++E +++ +S L + + + ++ T + Sbjct: 66 GFHPFKIALA--VSENQESFSSSEFDFNSR-----DLSSLKNYVAQRHIDVIKNTSEFIS 118 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L+ +E I A I I+G+G S D +K M+IG D H+QA ++ L+ Sbjct: 119 EEILEACVEKILTARTILISGVGASGNTAHDAFYKFMRIGLNCKTSHDAHIQAMIASELR 178 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 +GDV +AIS SGS EIV A+ ARK GATVIAIT SPL R AH L T + E+ + Sbjct: 179 EGDVLLAISQSGSTLEIVDIADIARKGGATVIAITGYARSPLARFAHHVLLTPTRESPFE 238 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 S ++ ++ AQ V +LLF + + + K I+R+++ + Sbjct: 239 SGALRSKIAQLYVLELLFTAVFHRMEEKGRKFIERTADSVAKW 281 >UniRef50_P44540 Uncharacterized HTH-type transcriptional regulator HI0143 n=33 Tax=Gammaproteobacteria RepID=Y143_HAEIN Length = 288 Score = 275 bits (705), Expect = 9e-73, Method: Composition-based stats. Identities = 78/284 (27%), Positives = 145/284 (51%), Gaps = 3/284 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L KI + T++E+KIAD + + + S ++AK L + ++++V+F + +G + Sbjct: 6 NVLNKIGSLYQSLTKSEKKIADTILRSPDLVSQCSLSEIAKHLQVGEATLVRFCRTIGFK 65 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF+E ++ L E + + + L + I D IA+KL +E+T LLD Sbjct: 66 GFSEFKLELSIELATKDNQDESI---LETEIMPSDDSLTIAQKLQTAVANVMEETINLLD 122 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 +L+++++V+ KA I + G+G S + D KLM+IG++V + H + L Sbjct: 123 LKQLEEVVKVLKKARRIFLFGVGSSGVTAEDAKNKLMRIGFQVDASGNNHFMYMQAALLT 182 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV I +S+SG E + A++ GAT +A+T SP+ A + L + + + + Sbjct: 183 SSDVAIGLSHSGYSAETAHTIKIAKQNGATTVALTHSLRSPVTEYADYVLVNGNKQGKLQ 242 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S+ T+ AQ V DL++ LVQ + + + Q++ + + Sbjct: 243 GDSIGTKIAQLFVLDLIYALLVQGEEDIAAQTKQKTLNVILEQR 286 >UniRef50_A8RRF4 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A8RRF4_9CLOT Length = 289 Score = 274 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 80/282 (28%), Positives = 148/282 (52%), Gaps = 4/282 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L +I ++ + E+ + FL+ N E S +Q+A + S ++IV+ +K+G Sbjct: 3 SVLVRIQEYSAQASGAEKGVLRFLRENPEEAAGYSIKQLADKTFSSAATIVRLCRKMGFD 62 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ EL+ +L+ E + RE T + I DDSLE + K+ + ++L+ T L+D Sbjct: 63 GYKELQKSLLYESALRRESTRP----MEQEIKKDDSLEELVNKVTYKNIVSLDNTRKLVD 118 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L + +E++ ++ + + G+G S LV RD+ KL+++ D H Q ++ ++ Sbjct: 119 LDILNQCVELLDRSQTVYLFGIGSSLLVARDMYLKLLRVNKACVICDDWHAQLLQARNIR 178 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 D+ + +SYSG +E++ CA AR + A VI I+ SPL RLA + L + E +R Sbjct: 179 SCDLALIVSYSGLTEEMITCAREARLREAPVITISRFEQSPLVRLADYNLAVAATELIFR 238 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 S +MS+R +Q ++ D+L+ V E ++ +++ Sbjct: 239 SGAMSSRISQLNMIDILYTAYVHKRYDECMEQFRKTHIAKSE 280 >UniRef50_C6XNZ1 Transcriptional regulator, RpiR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNZ1_HIRBI Length = 297 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 71/281 (25%), Positives = 138/281 (49%), Gaps = 7/281 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 +++I + IAD++ + + + +S ++A+ G S+ S++ ++LG Sbjct: 20 NVISRIRIRKDSLGPSTSTIADYVLGHANAVVGMSVTELAEATGTSEGSVINLCRQLGLS 79 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF +L+++L E +H + D + +K+ AL +T ++LD Sbjct: 80 GFQQLKLSLAQEVVR-------PVQFIHEDLQPSDDTSTVCQKMFHAGSEALRETLSILD 132 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + ++VI A ++I G+G SA + D +++++IG D+H+QA + Sbjct: 133 PDAISMAVDVIRSADRVEIYGIGSSAPIAEDAQYRMLRIGLDAKVVVDSHIQAISASRTG 192 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 + IS+SGS E + AR GA I IT+ SPL+ A L T++ ET++R Sbjct: 193 PNVAVLTISHSGSTHETLAATRLARDAGAKTIIITNFASSPLQAYADVKLYTMARETKFR 252 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 S +M++R AQ + D+L L + + +++++SE+ Sbjct: 253 SEAMTSRIAQLCILDVLIAALALDDYERATTVLRQTSEVLS 293 >UniRef50_A8RI47 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RI47_9CLOT Length = 285 Score = 274 bits (701), Expect = 3e-72, Method: Composition-based stats. Identities = 75/281 (26%), Positives = 147/281 (52%), Gaps = 8/281 (2%) Query: 6 KISNAGSEFTE-NEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFT 64 ++ + + NE KI +F++ N E+ +S A+ G+S+++IV++AQKLG +G+ Sbjct: 11 RVQSILPSINKKNEMKIYEFIEINRKEIIHMSVADAAEACGVSEAAIVRYAQKLGYKGYQ 70 Query: 65 ELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYAR 124 +++++ + ++ ++ ++ D++ I K+ +L T +L Sbjct: 71 AMKISIAQDVIEPGQQ-------IYGQLSKGDTIPTIVDKIFDSNIQSLRDTSDVLSREN 123 Query: 125 LQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD 184 + + + +I + G+GGS V D K +KIGY D+++QA + L D Sbjct: 124 IDEAVNLILGCRRLLFFGVGGSGCVAMDGQHKFLKIGYMAMAFTDSNLQAMAASVLTSRD 183 Query: 185 VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSS 244 V +A+S+SG+ K+I++ + A++ GA IAIT+ SP+ A L T S ET + S + Sbjct: 184 VLVAVSHSGASKDILMAMDIAKQSGAKTIAITNYGKSPIVEKADVVLYTSSNETAFNSDA 243 Query: 245 MSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +S+R A+ ++ D+L++G+ ES I ++ + K Sbjct: 244 LSSRIAELTIIDMLYIGVSYKRYDESYANILKTRKALDSTK 284 >UniRef50_A6LRF3 Transcriptional regulator, RpiR family n=2 Tax=Bacteria RepID=A6LRF3_CLOB8 Length = 294 Score = 273 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 76/283 (26%), Positives = 153/283 (54%), Gaps = 1/283 (0%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 Y KI N + +E+K+AD++ N + +++ ++++Q+G+S+ +I++F + +G Sbjct: 6 SYEYKIKNMYNLLRSSEKKVADYVLLNGHSVSTMTLAELSRQVGVSEPTIIRFVKSIGCS 65 Query: 62 GFTELRMALIGEYS-ASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 G++E +MAL+ E+ S +K + L + I D+ +E + K+ ALE T ++ Sbjct: 66 GYSEFKMALMKEWGRESVDKQYDSKLLVELHIDRDEKIEDVPVKMIGLTIKALEDTLKII 125 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D + +K IE+I + I + G+G S V D+ K ++IG +D+++Q + L Sbjct: 126 DINKYKKAIEMIRSSNIIDVYGVGNSGSVASDIRNKFLRIGLECRAYSDSNIQQICASHL 185 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 D+ I +S+SGS + V + A++ GA IA+T+ + A T T ET + Sbjct: 186 TSNDLAIGVSHSGSTIDTVNALKIAKESGARTIALTNFKAPAISEYADITFFTGGEETTF 245 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 S +M +R +Q ++ D+L++G++ + K +++ + L + Sbjct: 246 YSETMVSRISQLAIVDMLYMGILLDDYDLYTKRLEKINLLLKE 288 >UniRef50_B4EZY5 RpiR-family transcriptional regulator n=54 Tax=Gammaproteobacteria RepID=B4EZY5_PROMH Length = 295 Score = 272 bits (697), Expect = 9e-72, Method: Composition-based stats. Identities = 81/283 (28%), Positives = 139/283 (49%), Gaps = 3/283 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L + + T Q+IAD++ + +E+ +S Q+++ ++++V+F + LG + Sbjct: 13 KILDTLGAMKNSLTRVSQRIADYILFHPTEVTQLSIAQLSQATKAGEATVVRFCRTLGYK 72 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF + +M L E + S N + L + ++ D + I KL L +T LLD Sbjct: 73 GFQDFKMDLAIEMATSD---NDESPILDAEVSHQDDIHTIGLKLQATINNVLSETLNLLD 129 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 ++Q + + A ++ I G+G S + DL KLM+IGYRV + H + LK Sbjct: 130 MQQVQGAVNALLSANYVFICGVGSSGITAEDLKNKLMRIGYRVDAVTNNHFMYMQASLLK 189 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 GDV I IS+SG+ E V + A++ GA+ IA+T S + A L + + + + Sbjct: 190 SGDVAIGISHSGNSLETVHALKLAKEAGASTIALTHNLGSQIMEYADHHLINGNRQGKLQ 249 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 S+ T+TAQ V DLL+ LVQ + R+ ++ Sbjct: 250 GDSIGTKTAQLFVLDLLYTLLVQAKPETVKEQKLRTLNALKQT 292 >UniRef50_Q1QSE2 Transcriptional regulator, RpiR family n=28 Tax=cellular organisms RepID=Q1QSE2_CHRSD Length = 289 Score = 271 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 67/287 (23%), Positives = 121/287 (42%), Gaps = 10/287 (3%) Query: 1 ML--YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKL 58 M ++ F +EQK+A F+ + ++ + +A + +S+ ++V+F + L Sbjct: 1 MSSALFDEMRRRMEHFRRSEQKVARFVLRHPEDVIHMRIVDLATEAKVSEPTVVRFCRAL 60 Query: 59 GAQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCA 118 G GF + ++ L + + S+ DS+ A + L Sbjct: 61 GCNGFQDFKLKLAQMLATGSQ-------FAQFSMNDSDSVAEFAHNIFDSTVGTLLSVRD 113 Query: 119 LLDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQ 178 LD+A L K + ++ A ++ G G S V D K ++ A D H+Q + Sbjct: 114 RLDHAALGKAVTALAMANRVEFYGFGASGAVAFDAQHKFFRLQISTAAYTDPHMQNMSAV 173 Query: 179 ALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGET 238 L DV +AIS +G + +V AR+ GATVI + +DSPL L E Sbjct: 174 TLTPRDVVVAISQTGRTRALVASVRLARETGATVIGLC-PSDSPLASEVTLPLYIDVHED 232 Query: 239 EWRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + MS+R A + D+L VG+ + + + ++ + L+ Sbjct: 233 TEIYTPMSSRVAHLVIIDVLAVGVAKTRGPKLAEQLKSVKKSLVPLR 279 >UniRef50_Q1LPJ6 Transcriptional regulator, RpiR family n=6 Tax=Burkholderiaceae RepID=Q1LPJ6_RALME Length = 338 Score = 270 bits (692), Expect = 3e-71, Method: Composition-based stats. Identities = 65/281 (23%), Positives = 124/281 (44%), Gaps = 8/281 (2%) Query: 5 TKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFT 64 +I +E+++AD++ + + + ++ ++A + G+SQ +I +F LG GF Sbjct: 3 DRILAVYDSLRPSERRLADYVARHGASVIRLTMPELADRAGVSQPTIARFCAALGYDGFK 62 Query: 65 ELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYAR 124 E ++ +H + +DD IA K+ L L + Sbjct: 63 EFKLQFAQNVGGG-------TPFVHQDVEADDRPADIAGKVFDRTIATLMSVRNALSADQ 115 Query: 125 LQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD 184 ++ I +++ A I+ G G S +V D+ K ++G +D HV + + L+ GD Sbjct: 116 IEHGIRLLAGARRIEFYGCGNSGIVALDIQHKFFRLGIPTTAYSDPHVFSMSAALLRPGD 175 Query: 185 VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSS 244 V + +S SG +++ A AR GA+V+A+T SPL RLA + + E + Sbjct: 176 VAVLVSNSGRTWDMLTAATLARSSGASVLALTHSG-SPLARLADVCVFSDVEEDSEVYTP 234 Query: 245 MSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 M++R + D+L G+ +QR+ + + Sbjct: 235 MTSRICHLVLGDVLAAGVALDRADSVAAGLQRAKAHLRERR 275 >UniRef50_D1YCB1 Transcriptional regulator, RpiR family n=3 Tax=Propionibacterium acnes RepID=D1YCB1_PROAC Length = 290 Score = 270 bits (692), Expect = 3e-71, Method: Composition-based stats. Identities = 90/284 (31%), Positives = 146/284 (51%), Gaps = 1/284 (0%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L +I A + E ++A + A + S+ Q+A+ G+S +++V+F + LG Sbjct: 4 SLLPRIDMARTTMRPAEAQVAAVILAKPDWTLAASTSQLAEAAGVSPATVVRFCRALGMS 63 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ ELR L + S + +++ +IT DDSL + K+ + +E T +D Sbjct: 64 GYRELRTELARDLSRRTLELERSSV-AEGTITLDDSLTQMITKIAFHEARTIENTARAVD 122 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L+ + IS AP + G+G S LV DLS KL +IG DTH+Q + K Sbjct: 123 ADELEAVASAISIAPRTALFGVGSSGLVASDLSEKLERIGLVCQHHQDTHMQLVHAALCK 182 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 + V + IS+SG+ +E+V A+K GAT +A+T L DSP+ RLA L T + ET+ R Sbjct: 183 RPCVALGISFSGNTQEVVEALTVAQKHGATTVAMTGLPDSPVGRLADHVLVTSARETQVR 242 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + +MS+R AQ +V D LF + QL + ++ + + Sbjct: 243 AGAMSSRMAQLAVVDFLFARVAQLCMDDLETLLSSTRTAVSTHR 286 >UniRef50_B1YJ20 Transcriptional regulator, RpiR family n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YJ20_EXIS2 Length = 284 Score = 270 bits (691), Expect = 4e-71, Method: Composition-based stats. Identities = 78/283 (27%), Positives = 147/283 (51%), Gaps = 8/283 (2%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 ++IS E + +K+ADF+ A+++E+ ++ +A++ G S +++V+F + LG +G Sbjct: 5 IFSQISAVHEELPSSSRKVADFVLAHMNEIAGMTIHHLAEESGTSAAAVVRFCRALGLKG 64 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 + ELRM + + + T L + I ++ + K AL+ T L Sbjct: 65 YPELRMRISADTAR-------TDLKGYHDIEKNERPADLVEKTVSNSIQALQDTAKQLSE 117 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 R+ + +V+ +A I G+G S +V D + K ++G E+D H+ AT+ + Sbjct: 118 DRIAEAADVLDQARAIYFYGIGASNVVALDAAQKWTRVGKLTIQESDQHLVATILANASQ 177 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTV-SGETEWR 241 DV AISYSG +E+V A+ +G VI++T D+ + +LA L T + E R Sbjct: 178 DDVFFAISYSGETEEVVELIRLAKIRGLKVISLTRFGDNRVSQLADIALWTSRAPEAPLR 237 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 S+++S+R AQ D+LF+ ++ ++++ +Q + E + L Sbjct: 238 SAALSSRLAQLFAIDVLFLSYAAVHYDDTIERLQYTRESVKML 280 >UniRef50_C1PDB4 Transcriptional regulator, RpiR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PDB4_BACCO Length = 283 Score = 270 bits (691), Expect = 4e-71, Method: Composition-based stats. Identities = 80/278 (28%), Positives = 140/278 (50%), Gaps = 7/278 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L +I SEF+ E+KIAD++ N L + Q+A QL ++ +++ +F +++G GF Sbjct: 11 LHRIQTMYSEFSAKERKIADYILENPQRLVHSTINQVADQLLVADATVFRFCKRIGFSGF 70 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 L++AL E + ++ ++ D+ + +A K+ L+ T L+ Sbjct: 71 QALKIALAAEAAR-------PGKNMDEAVKDTDNEKAVAIKVFESNIETLQDTIHTLNQK 123 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L + +E I +A I G G ++++ D K ++ V D H+Q + K Sbjct: 124 HLHEAVEWICRAKHIVFYGCGSASVIALDALEKFLQTDLAVTAYTDPHLQLLSAARCTKE 183 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 DV + IS++G+ KE++ +A +K GA IAIT SPL + A L TVS E ++R S Sbjct: 184 DVAVFISHAGADKEMLKLLQAVQKTGAKTIAITQFAKSPLSQKADVPLFTVSQEADFRFS 243 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 S S R Q S+ D L+V ++ + +++Q+ E Sbjct: 244 SFSARIVQLSLIDTLYVNVMLRYKDTNEEILQKGKETY 281 >UniRef50_A9MIE1 HTH-type transcriptional regulator murR n=48 Tax=Enterobacteriaceae RepID=MURR_SALAR Length = 287 Score = 270 bits (691), Expect = 4e-71, Method: Composition-based stats. Identities = 229/281 (81%), Positives = 255/281 (90%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 MLYL K+ NA EFTENEQKIA FL A+V EL++VSSR MAKQL ISQSSIVKFAQKLGA Sbjct: 1 MLYLAKMRNAEGEFTENEQKIATFLLAHVGELKTVSSRNMAKQLEISQSSIVKFAQKLGA 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GFTELRMALI E+S SREK A+HLHSSITS+DSLE++ARKLNREK +ALE+T L+ Sbjct: 61 NGFTELRMALIEEHSVSREKKRDKAVHLHSSITSEDSLEMMARKLNREKIVALEETYNLM 120 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 DY RL+++I +ISKAP IQITG+GGSALVGRDLSFKLMKIG+RVACE DTHVQAT++QAL Sbjct: 121 DYERLEQVINLISKAPLIQITGVGGSALVGRDLSFKLMKIGFRVACEVDTHVQATIAQAL 180 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 ++GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSL DSPLRRLA +TLDTVSGETEW Sbjct: 181 RQGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLADSPLRRLADYTLDTVSGETEW 240 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 RSSSMSTRTAQNSVTDLLFVG+VQLNDVESL+MI+RSSEL Sbjct: 241 RSSSMSTRTAQNSVTDLLFVGMVQLNDVESLRMIERSSELI 281 >UniRef50_A4TMJ1 RpiR-family transcriptional regulatory protein n=22 Tax=Gammaproteobacteria RepID=A4TMJ1_YERPP Length = 292 Score = 269 bits (690), Expect = 5e-71, Method: Composition-based stats. Identities = 71/283 (25%), Positives = 138/283 (48%), Gaps = 3/283 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L + + T + Q+IA ++ A +++ +S ++ +++I++F + LG + Sbjct: 12 KILDALGAMQNSLTRSAQRIAAYILAQPAQVTQLSIADLSALTQAGEATIIRFCRTLGYK 71 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF + +M L E + N+ L + + D I KL L +T LL Sbjct: 72 GFQDFKMDLAIEVATRHNSENSL---LDADVQEGDDTLAIGSKLQSAINNVLSETLNLLS 128 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 ++++++V+ A I I G+G S + D KLM+IG RV + H + + Sbjct: 129 IESVEQVVKVLRPADRICIFGVGSSGITAEDAKGKLMRIGLRVDAATNNHFMYMQASLMN 188 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 GDV I IS+SG+ E V + A++ GAT +A+T S + LA + L + + + + Sbjct: 189 PGDVAIGISHSGTSAETVQALKLAKEAGATTVALTHNMGSRITELADYVLINGNRQGQLQ 248 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 S+ T+ AQ V DL++ LV+ + ++ + +++++ + Sbjct: 249 GDSIGTKIAQLFVLDLIYALLVKADPAQAESIKRKTTQAVSQN 291 >UniRef50_C0D6A5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D6A5_9CLOT Length = 282 Score = 269 bits (690), Expect = 6e-71, Method: Composition-based stats. Identities = 72/278 (25%), Positives = 137/278 (49%), Gaps = 3/278 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L K+ + + E ++ +++ ++ + ++AK+ S +++V+ +K+ Sbjct: 6 MSVLIKLRD-YRNLSAAENQVREYILKYPKKVLEYTVYELAKESFTSPATVVRLCKKIDI 64 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF L++ L E ++ ++I +DS I K+ +E+T L+ Sbjct: 65 KGFARLKVLLAEETKYFQDMKLNLLD--TTTIEKNDSPHAIIEKITNIAVKTIEETRVLV 122 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + + ++ ++ KA + G+G S+ V D +K M+IG V Q + Sbjct: 123 NEKQFMQVARLLQKAVIVDFYGVGASSPVAIDAQYKFMRIGKNVITYQLYDRQYVQAVNS 182 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 V I ISYSG KE++ A +K G V+A+TS ++ L R+A + L + ET + Sbjct: 183 DASHVGIIISYSGETKEMLKIAGILQKNGTPVVAVTSSGENSLNRIADYNLFVTAKETVF 242 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSS 278 RS +M++RTAQ + D+L+ L+ ES+K IQ++ Sbjct: 243 RSGAMASRTAQLYIIDILYALYCSLDYDESIKKIQQTR 280 >UniRef50_C2L140 RpiR family transcriptional regulator n=6 Tax=Clostridiales RepID=C2L140_9FIRM Length = 285 Score = 269 bits (689), Expect = 7e-71, Method: Composition-based stats. Identities = 66/282 (23%), Positives = 140/282 (49%), Gaps = 2/282 (0%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 +LTKI +A ++FT+ E+K+AD++ N ++ +S +A+ + +S+ +F + + + Sbjct: 4 DFLTKIRSAYNQFTKAEKKVADYILQNPDQVLFMSISDLAETCKVGDTSVFRFCKTMNVK 63 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ E +M L S + + D+++ +A K+ E ++++T +LLD Sbjct: 64 GYQEFKMTLS--LSMRGNGKESKEGDGGNVSLQDNNIAELAGKVLEETIDSIKETHSLLD 121 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + ++ + + +SKA I G+G S L K +I +V C Q + ++ Sbjct: 122 FNKVTEAMNALSKAKRILFFGVGASMLTAMKAMNKFHRIEPKVYCSEMVSQQLMSAATME 181 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 +GDV + SYSG+ ++IV A+ A++ GATV++IT S L L + + Sbjct: 182 RGDVAVIFSYSGATRDIVEIAKLAKESGATVVSITRFQKSELTDYTDILLLCGANVGSLQ 241 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 S S +Q + D+++ + + +++++++ + Sbjct: 242 KGSTSAEISQLFLVDIMYTEYYRRHYEYCNQILEKTTVAIKD 283 >UniRef50_C3WE65 Transcriptional regulator n=5 Tax=Fusobacterium RepID=C3WE65_FUSMR Length = 284 Score = 269 bits (688), Expect = 9e-71, Method: Composition-based stats. Identities = 87/285 (30%), Positives = 163/285 (57%), Gaps = 3/285 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L KI++ + E+K+ +++ N +++ +++ ++A SQ+++V+FA++LG Sbjct: 1 MGVLIKINSMLDNISSTEKKVGEYILENPDKIKDLNTYELANITKTSQATVVRFAKRLGF 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF ++AL + + +++ +H I DDS E+I RK++ E A+ T + Sbjct: 61 KGFPAFKLALSQDLGNRKAESHVNI--MHEEIKPDDSFEIIGRKISNENITAISDTYEVT 118 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D+ L+K + ++SKA I + G+G S +V +D +KL+++G E DTH+Q + + Sbjct: 119 DFTELEKAVVMLSKARKIMLAGIGFSGIVAKDFYYKLLELGKHAMIEVDTHMQLSCLSTM 178 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + DV IS+SG E+ + A+ +G TVIA+TS+ +P++ LA L+TV + + Sbjct: 179 GEDDVLFVISHSGKTMEMYNVVKVAKSKGITVIAMTSIAPNPIKDLADIRLNTVEMNSNF 238 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 RS+++S R +Q +V D+L+V ++ N I + EL Q K Sbjct: 239 RSTALSPRISQLTVIDMLYVKMMLENK-NMQDYIFDAIELVQGFK 282 >UniRef50_Q45581 Uncharacterized HTH-type transcriptional regulator ybbH n=7 Tax=Bacillaceae RepID=YBBH_BACSU Length = 283 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 72/283 (25%), Positives = 140/283 (49%), Gaps = 8/283 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L I + + +E+K+AD++ A+ + + +++ S +++++ + LG +GF Sbjct: 6 LAIIQSMKHKLPPSERKLADYILAHPHKAIESTVNEISALANSSDAAVIRLCKSLGLKGF 65 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 +L+M + G+ + + I + L I+ K A++ T L+DY Sbjct: 66 QDLKMRVAGDLAK-------PTFQGYRDIVPHEPLPSISEKTAGNAIQAIQDTSDLMDYK 118 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L++ + ++ KA + GLG S +V +D K ++I + DTH+ A++ K Sbjct: 119 ELERAVSLLLKAHTVHFIGLGASGIVAKDAQQKWLRIHKQATAFTDTHLVASLIANADKD 178 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTV-SGETEWRS 242 D+ AIS+SG +EIV A+++G T I++T + + + LA L T S E RS Sbjct: 179 DIVFAISFSGETQEIVELFAMAKEKGITTISLTQFSQTSVSALADVPLYTAHSNEALIRS 238 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 ++ S+R AQ + D+LF+G+ + I ++ Q ++ Sbjct: 239 AATSSRLAQLFIIDVLFLGMAAEQYETTTGYIDKTRAAIQSMR 281 >UniRef50_A9KMQ5 Transcriptional regulator, RpiR family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KMQ5_CLOPH Length = 285 Score = 268 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 84/284 (29%), Positives = 146/284 (51%), Gaps = 2/284 (0%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 K + +E+K+A + N+ + S+ ++A++ G+SQ + ++F + +G Sbjct: 3 NIEIKTRSIMDSLNNSERKVATYFLNNIENIFSIPIARLAEESGVSQVTWIRFCKAIGFD 62 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G +L+ +L E ++S + T+ S I +LE + + A+E T L+D Sbjct: 63 GLKDLKKSLFMELNSSTSEGIDTSDF--SDIKKHSTLEQMCNTIRNTTLQAVEDTIKLID 120 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 Y L+K++ ++SKA I++ G+G SALV D KL++I V D H Q + Sbjct: 121 YDTLKKVVSILSKASCIKLFGVGASALVADDFCKKLLRINKNVNFSYDMHTQLVYGANAR 180 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV + SYSG+ KE++ + A+K I IT T SPL A +++ + E +R Sbjct: 181 PEDVAVIFSYSGTTKEMLEIMDLAKKSNCPTIVITKYTKSPLVASADYSIYISAPEINYR 240 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S +MS+R AQ ++ DLLF L N K +++SSE+ + + Sbjct: 241 SGAMSSRIAQLTIVDLLFTSLANKNYTSVEKYLEKSSEVCRSHR 284 >UniRef50_C4DDH7 Transcriptional regulator, RpiR family n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DDH7_9ACTO Length = 342 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 74/282 (26%), Positives = 135/282 (47%), Gaps = 1/282 (0%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L ++ A +E++IA+ + + ++ ++A S +++V+F Q++G Sbjct: 11 TVLVRVRAALPGLRPSERRIAEAILDDPHATAGLTVAELAAACDTSTTTVVRFYQRIGYG 70 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 + +LR+ L E + + A I DD+++ I K+ + L++ T +LD Sbjct: 71 RYKDLRLDLTRE-ATREQLETANLPAASGDIDRDDTIDDIIAKVAANETLSIADTAEILD 129 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L + ++ + A + G+G S VG DL KL +IG DT + + L Sbjct: 130 RDALARAVDCVLNARRVDSFGVGASGFVGLDLQQKLTRIGRTALSWLDTDAAWSAAVTLD 189 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 + V IAIS++G+ V A +GAT IAIT+ ++ L A L T + ET +R Sbjct: 190 EQCVAIAISHTGTTAATVEFLAMAAAEGATTIAITNHDNTALAETADVVLTTAARETRFR 249 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 S ++ +R AQ V D LF G+ + + S+ ++++ R Sbjct: 250 SGALGSRIAQLMVVDCLFTGVARASYDASMSALRKTYAAVHR 291 >UniRef50_UPI0001789683 transcriptional regulator, RpiR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789683 Length = 289 Score = 268 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 73/282 (25%), Positives = 146/282 (51%), Gaps = 7/282 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L IS+ S T+ E+K+AD+++ E + ++++ G+ ++S+++F +KLG + Sbjct: 12 NTLLMISSIYSSLTKTEKKVADYVKGFPEETVLATVTDLSEKAGVGETSVIRFCRKLGFR 71 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF E ++++ + + + +SI D L +ARKL + E+ L+ T L++ Sbjct: 72 GFHEFKLSVAQDL------VDRPPSVVDTSIDEQDDLMTVARKLTMQHEILLKNTLDLVN 125 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L+ ++ + A + + G+G S + DL ++LM++G V D+H+ A + +K Sbjct: 126 ADNLRMAVDKLLAANKVYVYGVGSSGITALDLHYQLMRLGLNVEAHRDSHIIAMSASLVK 185 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 KGD+ AIS SGS +++V + A+K GA VI +T SP+ A L S E Sbjct: 186 KGDLVFAISTSGSTRDLVDAVKEAKKNGADVICLTGHLRSPIATYADTVLLVSSREMPTE 245 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 +++T+ Q + ++L L ++ + +++++ Sbjct: 246 GGALATKFMQTYMLNILTTLLTMK-KEDASESLKKTASSVAD 286 >UniRef50_C8W838 Transcriptional regulator, RpiR family n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W838_ATOPD Length = 304 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 81/270 (30%), Positives = 135/270 (50%), Gaps = 5/270 (1%) Query: 6 KISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTE 65 ++ + E+ I D++ ++ + S ++A Q S S++V+ +KLG G+ E Sbjct: 7 RLEEYRKNASSAERDIIDYILSDPEAVVGQSIHKLAAQTYTSASTVVRLCKKLGCGGYKE 66 Query: 66 LRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARL 125 + ALI E + S + + + + D+ +VI K+ + +LE T LLD + Sbjct: 67 FQQALIYELAVSNKSNDIAV----GGVIAGDTTDVIIEKVTAKNISSLELTMQLLDAQVV 122 Query: 126 QKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDV 185 ++ ++ +A I + G+G S LV RDL KLM++ D H Q ++ + + D+ Sbjct: 123 DSVVSLMMQAHSICLFGMGASLLVARDLQLKLMRLNINCNLSDDYHSQLLYAKNMSREDL 182 Query: 186 QIAISYSGSKKEIVLCAEAARKQGATVIAITSLT-DSPLRRLAHFTLDTVSGETEWRSSS 244 I +SYSG +E + CA A+ GA VI+IT DS L + + L E RS + Sbjct: 183 AIVVSYSGLTREAIECAWIAKANGAKVISITRGGIDSELIHRSDYVLGVAETEHIMRSGA 242 Query: 245 MSTRTAQNSVTDLLFVGLVQLNDVESLKMI 274 MS+R AQ +V D LF V N +S+K Sbjct: 243 MSSRIAQLNVVDALFAAYVNRNYEKSVKRF 272 >UniRef50_C4FUK3 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FUK3_9FIRM Length = 280 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 80/284 (28%), Positives = 141/284 (49%), Gaps = 7/284 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M +TKI +A T EQ I ++ + E+ +++ ++ G S ++ +FA+K+G Sbjct: 1 MSCITKIKSALESMTATEQMIGRYILEHRHEVLEMNTLELGWASGTSGAAWTRFAKKMGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +G L++ L + +T+ + + D+L + K E L +T L+ Sbjct: 61 KGLPALKLDLAQD------RTDEEMPEVDLFLDPRDTLGALLHKTQTILEQNLRRTYELI 114 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D A L + I++++ A + + G+GGS +V DL KL +I V + DTHV Sbjct: 115 DEAVLAQAIDMMASAHRLFLCGIGGSGIVCMDLVHKLTRINRPVTYDRDTHVLMAQMAHC 174 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITS-LTDSPLRRLAHFTLDTVSGETE 239 GDV + +SYSG+ + A A++QGA +IAIT +PL LA L E E Sbjct: 175 MPGDVVLVVSYSGNTHTVNQMAYLAKEQGAKIIAITGHNLKAPLASLADVCLFIPRDEKE 234 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 R S+++R VTDLL+ G+ Q + + + ++ ++ ++ Sbjct: 235 IRLGSVTSRDGSLIVTDLLYYGVAQRQFHATKEHLVKTRKMIRK 278 >UniRef50_UPI000197C448 transcriptional regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C448 Length = 286 Score = 266 bits (682), Expect = 4e-70, Method: Composition-based stats. Identities = 117/284 (41%), Positives = 185/284 (65%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L I+ + EN++KIA F+ N + ++SS+Q+A+ L +SQS+IVKF+QK+G Sbjct: 1 MTLLDIITYSLPRLAENQRKIAQFILENPENVLNLSSQQLAEILDVSQSAIVKFSQKVGV 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +G+ L++AL + K A LH+ I DD+L V+A+KL EK ++ +T L+ Sbjct: 61 KGYPALKLALSEIIGRQQLKDGAPHSALHNRIAPDDNLMVVAQKLAMEKNHSITETTKLI 120 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D+ + ++I+E I ++ +QI G+GGS L +DLS+KL KIG E+D HVQ + L Sbjct: 121 DFKQFERIVERIDQSQRVQIVGIGGSGLTAKDLSYKLQKIGITTLVESDHHVQIAAALTL 180 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 DVQI IS++G +K+++ A ARKQGA VIAIT DSPL +LA + L++++ E EW Sbjct: 181 NTHDVQIVISFTGRRKDMLTAANIARKQGACVIAITRDCDSPLGQLADYVLESIAEEDEW 240 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 RSSS+S+RTAQN++TDL+F+ L+Q + ++ ++ + + +L Sbjct: 241 RSSSISSRTAQNTLTDLIFMALLQRREAKAKSLVMNARVVINKL 284 >UniRef50_A6LUR0 Transcriptional regulator, RpiR family n=2 Tax=Clostridium RepID=A6LUR0_CLOB8 Length = 281 Score = 266 bits (682), Expect = 4e-70, Method: Composition-based stats. Identities = 87/285 (30%), Positives = 152/285 (53%), Gaps = 5/285 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L I FT+ E+ IAD+L + S+S+R +A+ S ++V+FA+K+G Sbjct: 1 MNVLQYIKQNYDSFTDREKLIADYLIETKERIISMSARDIAEATKTSAPTVVRFAKKIGF 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 EL++ L S E +L + + + + I + + + +EQT +LL Sbjct: 61 NTLNELKLKLSINISKEEEAGAIQFQYLDNDLGTKN----IIYGIKQSVDSIMEQTVSLL 116 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D L K IE++ A I I +G S LVG+D +KL ++ R C DTH+Q T S L Sbjct: 117 DEECLDKAIELLISAKNIYIFSVGVSGLVGQDFYYKLSRMNKRCICNTDTHLQITSSVLL 176 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAIT-SLTDSPLRRLAHFTLDTVSGETE 239 ++GDV +AISYSG KE++ C + AR + VIAIT + ++ + ++ + + E Sbjct: 177 EEGDVALAISYSGETKEVIKCVKNARNRKVPVIAITKASVNNTIADISDIVIRIPAVEKS 236 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 R ++S+R +Q ++ D+L++G+++ N E + + + + + L Sbjct: 237 IREGAISSRISQLAIIDMLYIGMIRNNIKEVEEKLISTRKAVKEL 281 >UniRef50_C9AZQ1 Phosphosugar isomerase transcriptional regulator n=2 Tax=Enterococcus casseliflavus RepID=C9AZQ1_ENTCA Length = 283 Score = 266 bits (682), Expect = 5e-70, Method: Composition-based stats. Identities = 80/284 (28%), Positives = 147/284 (51%), Gaps = 6/284 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 +I + + EQ IAD++ N S++ S ++ +LGI+ S+ +F +KLG Sbjct: 4 SIRLQIKTLYKDLSLKEQAIADYILENPSKVSHSSISDLSNELGIADSTFFQFTKKLGYN 63 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF + +MA++ ++ + +A+ +H +I D+ +A+K+ L T LL Sbjct: 64 GFKDFKMAML------MQENDFSAISIHENIQKSDNELTMAQKVFDSNMTTLTDTKNLLK 117 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L+ +I+++ + G+GGS +V D K ++ V +D H+Q + L Sbjct: 118 EEDLKLAAAMINQSKRLFFFGVGGSEIVATDAYHKFLRSPITVFHSSDYHIQLMEASLLT 177 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 D I IS++G +E + A+ A+ GA +I ITS SPL +L ++S ETE+R Sbjct: 178 PDDCGIFISHTGKSRETIELAQVAKNNGAKIIVITSHAASPLAKLGDVVFISISEETEFR 237 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S ++++R AQ S+ D L+V L+ +N ++ + I + ++K Sbjct: 238 SEALASRIAQLSIMDSLYVILMFINRDKAQQSIAKIRRSISKIK 281 >UniRef50_C3RKW6 Sugar isomerase n=3 Tax=Bacteria RepID=C3RKW6_9MOLU Length = 291 Score = 266 bits (682), Expect = 5e-70, Method: Composition-based stats. Identities = 78/284 (27%), Positives = 143/284 (50%), Gaps = 4/284 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M +T++ F+ +E+ IA ++ N ++ ++S +++AKQ S ++IV+ +KLG Sbjct: 1 MSIMTQLEFELD-FSSSEKTIAKYILDNGEDILNLSVKELAKQTYTSPATIVRLCRKLGL 59 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 G+ + ++ E +K N + ++ + DS IA ++ + A+E T L+ Sbjct: 60 NGYGDFKIKYSAELQF--DKKNKKRVDVNFPFGNTDSNSQIAYRIANLHQEAIEDTLNLV 117 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D+ L KII ++ +A I + G G S L G D K+M+IG V A Q +S Sbjct: 118 DFKNLDKIINLLDQARRIYLFGNGNSLLAGFDFQHKMMRIGKMVEMRAHAGEQGFLSYTC 177 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 DV I ISYSG E+V A+ +K ++ ITS+ D+ L + + ++T S E + Sbjct: 178 SPDDVAILISYSGETNEMVELAKFLKKMHVPLLGITSIGDNQLSKYCTYIMNTGSREKIF 237 Query: 241 -RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 + + S++T+ + + DL+F + +LN + +L Sbjct: 238 SKIAPYSSKTSISYLLDLIFSCIFRLNYDHYINEKINRDKLFDH 281 >UniRef50_A7VQA6 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQA6_9CLOT Length = 290 Score = 266 bits (681), Expect = 6e-70, Method: Composition-based stats. Identities = 72/285 (25%), Positives = 139/285 (48%), Gaps = 7/285 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M +I S + +KIADF+ + + ++ Q+A+ +S++S+V+F Q L Sbjct: 12 MGCTERIQATYSALSGASKKIADFVIDHPDQAVHMTVVQLAESCEVSEASVVRFCQCLQY 71 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF E +++L E + + + IT +D+ I K+ ++ AL++T +L Sbjct: 72 AGFYEFKLSLAAEIVPASQM-------IQEDITVEDTEPTILEKVFAGEQQALQETLQML 124 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + + I+ + ++ G + + +D ++L++ G D + + L Sbjct: 125 NRQDFISAVNHIAFSNKVEFFSCGNARPIAQDAHYRLLRTGIDSRIGIDDYDCLIHASML 184 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + GDV I IS+SGS K + E A+K GAT I IT + +P+ R++ + + S ET + Sbjct: 185 RTGDVAIGISHSGSTKNTIKMLEEAKKNGATTICITGMEKAPITRVSDICMVSHSKETMF 244 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 RS +M++R AQ ++ D L V + S + + + ++ K Sbjct: 245 RSMAMASRIAQMAIIDALVVAVSFKRFERSKQYLTLTDKILVEDK 289 >UniRef50_A5L3V2 Transcriptional regulator, RpiR family protein n=3 Tax=Vibrionales RepID=A5L3V2_9GAMM Length = 282 Score = 266 bits (680), Expect = 8e-70, Method: Composition-based stats. Identities = 97/285 (34%), Positives = 169/285 (59%), Gaps = 4/285 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M + K+ + + ++ +A ++ + +++ +SS ++AK +G+SQS+IVKF+QK+G Sbjct: 1 MKGIAKVKALLPKLSPSDSLVARYVLDHPQQVKQLSSPELAKAVGVSQSTIVKFSQKIGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF+E+++ L Y + + +H +IT DS + + KL K +LE+T L Sbjct: 61 KGFSEMKVKL---YQSDMSYQPVSQRGIHGTITRKDSPDTVMEKLLASKTQSLERTVLLN 117 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + +L +++ A IQI+G+G S+LV +D ++KLMKIG+ V E D H+Q + +L Sbjct: 118 EGEQLSNAADLLHLANKIQISGVGASSLVAKDFAYKLMKIGHAVHAEPDAHIQIANAASL 177 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + DV +AISYSG +E+V A+ AR + A VI I+ L+ S L + A L + + E Sbjct: 178 TENDVLVAISYSGKTREVVKVAQLARSKKAKVIVISQLSPSALDKYADIKLISAADENHI 237 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 RSSS++ R +Q +TDLLF+ L Q + ++ ++I++S K Sbjct: 238 RSSSITARDSQFYITDLLFIALTQ-QEEQADQLIEQSKSAVAEFK 281 >UniRef50_A6LVH8 Transcriptional regulator, RpiR family n=8 Tax=Firmicutes RepID=A6LVH8_CLOB8 Length = 282 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 82/284 (28%), Positives = 142/284 (50%), Gaps = 6/284 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 KI + + + EQ IAD++ N + S ++ +L ++ S++ +FA+KLG Sbjct: 4 SVRLKIKSLYNGLSAKEQNIADYILENPISVAHNSISYLSDELNVADSTLFQFAKKLGYS 63 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF E +MA++ E + N + +H I DD+ +A+K+ L T +L Sbjct: 64 GFKEFKMAILIE------ENNFSTTSIHEKIEIDDNELTMAQKVFDSNIKTLTNTKKILG 117 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L+K E+IS + + G+GGS ++ D K ++ V D H+Q + L Sbjct: 118 LDDLKKAAEIISNSNLLYFFGVGGSGILAEDAYHKFLRSPAHVRHSTDYHIQLMEASLLT 177 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 D I IS++G KE + AE ++ GA VI ITS SPL ++ ++S E E+ Sbjct: 178 PQDCAICISHTGKSKETIRIAEIVKEAGAKVIVITSHASSPLAKIGDVVFISISEEIEFH 237 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S ++S+R +Q S+ D L+V L+ +N +S + + + +K Sbjct: 238 SEALSSRISQLSILDSLYVILMFMNKEKSKEALSKVRRTIWDVK 281 >UniRef50_A8FIY5 Possible RpiR family transcriptional regulator n=4 Tax=Firmicutes RepID=A8FIY5_BACP2 Length = 286 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 64/284 (22%), Positives = 141/284 (49%), Gaps = 6/284 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + I + ++KIA+++ N ++ S +A + S+++I +F +K+G + Sbjct: 8 NIFSHIRTTFHSLSPTQKKIANYILENPQKVVLHSISALASECNTSETTIFRFLRKIGYE 67 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 + R+ + + + + ++ ++ I + DS+ I K+ +++ +++ Sbjct: 68 SYQVFRVHVAQDIATNTPQS------IYGEIEASDSVADIKHKVIELTTNSIQDMKHIVE 121 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + + IE + +A G G S+ + D K +++G+ V+ +D H+ ++ Sbjct: 122 DHAVTQFIEQMKQAHKTVFFGAGASSFIAGDAYHKFLQLGFDVSLCSDPHMMNMIATHAT 181 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 + D +AIS+SG +EI+ + A+++GA + +ITS S L + + F L + S ET +R Sbjct: 182 EHDFIVAISHSGESREILDAVQFAKEKGAKIASITSYPKSELAKRSDFHLLSSSRETTYR 241 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S SM +R Q + D+L+V V +++ ++RS + K Sbjct: 242 SDSMISRINQLVIIDVLYVAAVLELGSNAIENVKRSRLAVAKNK 285 >UniRef50_B0N1V0 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0N1V0_9FIRM Length = 277 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 82/283 (28%), Positives = 149/283 (52%), Gaps = 7/283 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M KI A S +T E+ IA ++ N +++ S++ + ++ G S ++I++F++KLG Sbjct: 1 MNSYAKIKEAQSSYTSTEKVIAKYILENAADVLKCSAQSLGEKTGTSAAAIIRFSKKLGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF+EL+M+L A + I +D + +A K R + +T L+ Sbjct: 61 NGFSELKMSLAQ-------SKRAPEEKIDFIIDENDDIVTLADKCCRLNMNTVLKTYQLI 113 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D +L I+ + A I + G+GGSA+V +D+ KL +IG +V D HVQ T S+++ Sbjct: 114 DTNQLDNAIKKLIAANTIYLFGVGGSAIVAQDVEQKLTRIGKKVIYNKDLHVQLTFSESM 173 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 K D + ISYSG+ K +V A+ + + +I+IT +PL +L+ L + E E Sbjct: 174 NKEDAALFISYSGTTKGLVEIAKMIKNKNVPIISITQFKPNPLSKLSDIILQVPNEEKEI 233 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 R ++S+R + +TDLL+ G+ + + + + + + + Sbjct: 234 RMGAISSRISSLVMTDLLYYGVFKNDLTGNKDKLIETKRIVSK 276 >UniRef50_C8NZR0 RpiR family transcriptional regulator n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZR0_ERYRH Length = 280 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 82/285 (28%), Positives = 158/285 (55%), Gaps = 7/285 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M + +I +T+ E++IA+++ N E+ + SS+ AK++ S ++IV+F++K+G Sbjct: 1 MSCIYRIKENMHTYTDTEKRIAEYILENKDEVVNFSSQHFAKEINSSAAAIVRFSKKIGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GFT L++ L ++S + + I +D++E + RK + + T LL Sbjct: 61 NGFTHLKVELARDHSEEEQSFDKL-------IKEEDTIETMVRKSHYSNHRTFDNTYKLL 113 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + L I IS A I + G+GGS +V +DL K ++I V D H++ + + Sbjct: 114 NLEVLDASIAAISNARRIYLLGIGGSGIVCQDLYHKFVRIDADVVYFDDFHLEMSSLTHI 173 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + DV IA+SYSG +EI++ + A+ +GAT IAIT + + L + + F ++ E+E Sbjct: 174 TENDVTIALSYSGQTREIIMAQKLAQDKGATTIAITQVGRNELAKNSDFVINIPKEESEV 233 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 R S+++R + +++DLL++G+ + N E+ + I + + + ++ Sbjct: 234 RLGSIASRFSMLAISDLLYLGVAKNNIEETRRKIVNTRDTIKSIR 278 >UniRef50_A8RWE9 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RWE9_9CLOT Length = 301 Score = 263 bits (674), Expect = 4e-69, Method: Composition-based stats. Identities = 72/280 (25%), Positives = 140/280 (50%), Gaps = 7/280 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 ++ ++ E + A+++ A+ +L S +A++ G S++++ + KLG + Sbjct: 24 TLYDRVEEKRGSLSKKELETAEYMAAHQEQLIYSSITDLAERAGSSEATVTRVCGKLGYR 83 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF L++ + E + +EK +H ++ +D EVI K+ L T ++ Sbjct: 84 GFQALKVGVARELTTPQEK-------IHENLEADSPAEVIIEKIFSSAIETLSMTQKSIN 136 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + I+ + +A I I G G SA + D K +++ D H+Q ++ Sbjct: 137 VKAVAASIDALCRARRIIIIGNGNSASIAADAQHKFLRLDLNAHAYTDDHMQMIAVSSMT 196 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV +AISYSGS + +V A A++QGATVI++T+ SP+ +LA L+T S ET +R Sbjct: 197 DQDVLLAISYSGSSRNVVEAAHQAKEQGATVISLTNEGSSPVSKLADICLNTYSQETRYR 256 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 + ++S+R A+ ++ D ++ G+ +++ + Sbjct: 257 TYAISSRMAELTIIDTIYTGVALRLGDKAIANFEALERAL 296 >UniRef50_D1ALE3 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ALE3_SEBTE Length = 282 Score = 263 bits (674), Expect = 4e-69, Method: Composition-based stats. Identities = 66/280 (23%), Positives = 143/280 (51%), Gaps = 5/280 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 KI++ FT +E K+ ++++ N + ++ R+++ + +++I++F +K G + Sbjct: 7 NLFNKINSLKKSFTASETKVFNYIEKNPESVVRMNIRELSNAIDTGETTIIRFCKKTGFK 66 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ + +++LI S ++ I +D++ IA + L+ T +L++ Sbjct: 67 GYNDFKISLISSLSKEKQSN-----KYKIDILADENYNSIAEGIYNNSFNVLKDTLSLIN 121 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L K I +I+ A I+ G+G S L +D +K ++IG VA +D H+ + Sbjct: 122 NEILDKCINLINNAKHIEFIGIGHSNLTAQDAKYKFLRIGKSVASHSDPHLFKMAASISD 181 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 + DV I IS +G +E++ ++A+ +GA IAIT+ + + + A + L E Sbjct: 182 REDVIIGISQTGETREVIDSLQSAKVRGAKTIAITNNDKTEITKYADYVLLNGFNEELLE 241 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 + S S R +Q + +LL++G++ N +++++ + + Sbjct: 242 TGSFSERISQLFIIELLYLGVLSKNKDKAMELKDLTIKAV 281 >UniRef50_C6L9A2 Transcriptional regulator, RpiR family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L9A2_9FIRM Length = 336 Score = 263 bits (673), Expect = 6e-69, Method: Composition-based stats. Identities = 70/264 (26%), Positives = 122/264 (46%), Gaps = 3/264 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L I+ T + +K+AD++ AN +E Q +S +A+ G+S+++I +F +KLG Sbjct: 55 NILDLITEQYPTLTRSGKKLADYIFANTTETQYLSISALAENSGVSEATITRFCRKLGLS 114 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ + ++A+ + S+ITS DSL I +KL L+L +T LLD Sbjct: 115 GYNDFKLAIAK---SDHVTDMGEPSGSPSTITSQDSLPDIFQKLLSANILSLTETFDLLD 171 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + + ++++ A + G G S+++ + + R AD+H+Q Sbjct: 172 EKEISRAVDLLYGAHHVYCLGNGSSSVMAMEAWARFSTASTRFIHIADSHMQMLSIALAT 231 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV + SYSG+ +++ A K+ VI +T S A TL E+ + Sbjct: 232 PQDVILFFSYSGATRDMEDIMNIAHKRKIPVILVTHFPKSQAAAFADVTLLCGYNESPLQ 291 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQL 265 S S++ R Q + D LF G Sbjct: 292 SGSIAARMGQMLIIDCLFHGFCLK 315 >UniRef50_B6GA31 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GA31_9ACTN Length = 281 Score = 263 bits (672), Expect = 7e-69, Method: Composition-based stats. Identities = 75/276 (27%), Positives = 133/276 (48%), Gaps = 5/276 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L ++ + E+++ + + + + +S ++A +S S+I + +KLG + Sbjct: 3 SLLVRLKQYRDNASPAERELIERILDDPESISGLSIHELAAYAFVSPSTITRLCKKLGLK 62 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ E + LI + + RE +++ + D+ K+ R+ +L L D Sbjct: 63 GYKEFQHLLIYDLALLRESSSSKI----EDLAPTDTSRQTIEKVTRDNIDSLRLVEKLND 118 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + ++++S A I + G+G S L RD+ +KL++IG D H Q + Sbjct: 119 PETYEACVDLMSDARTINLFGMGASLLSARDMHYKLLRIGVSCNLIDDWHGQLLCASNSG 178 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLT-DSPLRRLAHFTLDTVSGETEW 240 D+ IAISYSG +E+ +C AR++G VIAIT DS L R A L S E Sbjct: 179 PEDLSIAISYSGLTEEVNVCVGRARERGGKVIAITGSAFDSKLARQADEVLLVGSTEPLM 238 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQR 276 RS++M++R Q V D+LF V N +++++ Sbjct: 239 RSAAMASRIGQLGVIDILFKSFVNRNYARFSEVLEQ 274 >UniRef50_P46118 HTH-type transcriptional regulator hexR n=302 Tax=Gammaproteobacteria RepID=HEXR_ECOLI Length = 289 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 69/285 (24%), Positives = 127/285 (44%), Gaps = 8/285 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L KI + +++E+K+A+ + A+ S MA + +S+ ++ +F + + Sbjct: 1 MNMLEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAAMALEANVSEPTVNRFCRSMDT 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF + ++ L + +++ ++ DDS+E K+ L+ L Sbjct: 61 RGFPDFKLHLAQSLANG-------TPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSL 113 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D + + + ++++++A I GLG SA V D K + V D +Q Sbjct: 114 DKSAINRAVDLLTQAKKIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNC 173 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 GDV + IS++G K +V A+ AR+ A VIA+TS +PL R A + E Sbjct: 174 SDGDVVVLISHTGRTKNLVELAQLARENDAMVIALTS-AGTPLAREATLAITLDVPEDTD 232 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 M +R AQ +V D+L G + ++R E + + Sbjct: 233 IYMPMVSRLAQLTVIDVLATGFTLRRGAKFRDNLKRVKEALKESR 277 >UniRef50_Q3JNN8 Transcriptional regulator, RpiR family n=54 Tax=Burkholderiaceae RepID=Q3JNN8_BURP1 Length = 339 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 77/284 (27%), Positives = 135/284 (47%), Gaps = 8/284 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L +I ++ +E+K+ADF+ A E+ +S ++A + G SQ +I +F Q LG Sbjct: 7 TMLPRIETIRAQLRPSERKLADFVLAAPREVLDLSMTELAARAGASQPTIARFCQALGCS 66 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF E ++ L + ++ + D+ I K+ AL + L Sbjct: 67 GFREFKIRLAQSVA-------PGVASVYRDVEPDERAPGIIGKVFDRTIGALIEVRNSLS 119 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + + IE++++A I+ G GGS + +D+ K ++G +D H + + L Sbjct: 120 ATSVAEAIELLTRASRIEFYGAGGSGIAAQDIQHKFFRLGVPSVAYSDPHTFSMSAALLG 179 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV +AIS +G ++IV A AA GA VI+IT SPL +L+ +L + E Sbjct: 180 ANDVVVAISNTGRTRDIVDAARAALACGAKVISITHS-HSPLAQLSTVSLASNVAEETDV 238 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S M++R + ++ D+L VG+ E + + R+ E R + Sbjct: 239 FSPMTSRMSHLAIGDILAVGVALRRGPELVDRLGRAKEAITRRR 282 >UniRef50_D0W145 Transcriptional regulator HexR n=3 Tax=Neisseriaceae RepID=D0W145_NEICI Length = 315 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 70/279 (25%), Positives = 131/279 (46%), Gaps = 7/279 (2%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 L+KIS + ++ + E+K+A+ A + ++A+ +SQ ++++F + LG +G Sbjct: 1 MLSKISESLADLSGAERKVAECALAKPKWFVHAAVAEIAEHSSVSQPTVIRFCRSLGYKG 60 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 E ++AL + ++H + +DD + + K+ +L L Sbjct: 61 LPEFKLALSASIG------HEGMPYVHEELNADDDMSSVVEKVLGNAAASLLGERRFLKE 114 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 + L+ I + A ++ G+G S +V +D K + G DTH Q + L Sbjct: 115 SELENAIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYVDTHTQLMAASVLSS 174 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 DV IAIS +GS E++ A++ GA++IA+T +SPL ++A L + E Sbjct: 175 EDVLIAISNTGSSIELLDAVSIAKENGASIIALTRN-ESPLAQMADCVLSIATQENAELY 233 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 + M +R Q +V D+L +GL + +Q+S + Sbjct: 234 TPMVSRLLQLAVIDILAIGLALRLGDAASLQLQKSKKAY 272 >UniRef50_A9M040 RpiR/YebK/YfhH family transcriptional regulator n=24 Tax=Neisseria RepID=A9M040_NEIM0 Length = 282 Score = 261 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 72/280 (25%), Positives = 131/280 (46%), Gaps = 7/280 (2%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 L+KIS + + + E+K+A+ A + ++A++ +SQ ++++F + LG +G Sbjct: 1 MLSKISESLANLSGAERKVAECALAEPKWFVHAAVAEIAERASVSQPTVIRFCRSLGYKG 60 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 E ++AL + ++H + +DD + + K+ +L L Sbjct: 61 LPEFKLALSASIG------HEGMPYVHEELNADDDMASVVEKVLGNAAASLLGERRFLKE 114 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 + L+ I + A ++ G+G S +V +D K + G DTH Q + L Sbjct: 115 SELENAIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYVDTHTQLMAASVLSD 174 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 DV +AIS +GS E++ A++ GA+VIA+T DSPL +LA L + E Sbjct: 175 QDVLVAISNTGSSIELLDAVSIAKENGASVIALTRN-DSPLAQLADCVLSVATQENAELY 233 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 + M +R Q +V D+L +GL + +Q+S + Sbjct: 234 TPMVSRLLQLAVIDILAIGLALRLGDAASLQLQKSKKSIH 273 >UniRef50_C3RM33 Sugar isomerase n=2 Tax=Bacteria RepID=C3RM33_9MOLU Length = 312 Score = 260 bits (665), Expect = 5e-68, Method: Composition-based stats. Identities = 67/284 (23%), Positives = 136/284 (47%), Gaps = 4/284 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L K+ A F+ +E+ IA ++ N ++ ++S+ Q+AK S ++I + QKL Sbjct: 1 MSLLRKLEMAVD-FSTSEKLIATYILKNGPDVLNMSTSQLAKATYTSPATITRLCQKLEY 59 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +G+ + ++AL + + ++ + T + + D++ I + + ++ T + Sbjct: 60 KGYNDFKIALSAQLQYTFDRNSET--NPNFPFKKRDTIHTIKHSIATLAKDSINLTVNNI 117 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D L KII ++ +A I I G+ G + D +K+ +IG V + Q + Sbjct: 118 DNDILAKIIIMLDQAKVIDIYGVSGPLRIASDFQYKMFRIGKNVQIAPMVNEQLFQAAQS 177 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 K I ISYSG E++ AE +++ +IAITS +S L +L + L S E + Sbjct: 178 NKDHCAILISYSGETNEVIAAAELLKRRKVPMIAITSFGESRLSKLCDYVLFLDSRERIY 237 Query: 241 -RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 + S+ + + + + D+++ L + E+L++ + + Sbjct: 238 SKVSTFGSTISIHIMLDIIYSCLFARHYDENLELKLETDHIIDH 281 >UniRef50_Q2G836 Transcriptional regulator, RpiR family n=4 Tax=Proteobacteria RepID=Q2G836_NOVAD Length = 296 Score = 259 bits (664), Expect = 6e-68, Method: Composition-based stats. Identities = 75/281 (26%), Positives = 140/281 (49%), Gaps = 7/281 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 LT+I +A + ++ KIA ++ + +++ +S +A + S+ S++ F + +G Sbjct: 19 NALTRIRSALPQMSKTAAKIAAYVVEHPADVVGMSITDLAALVDASEGSVINFCRSIGLG 78 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF L+++L E +H + +DS E + RK+ AL + ++LD Sbjct: 79 GFQHLKLSLAQEIVQ-------PVHFIHEDLEREDSTETVCRKVFHSGIQALRDSLSVLD 131 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + +++I A ++I G+G SA + D ++L++IG D+HVQA + Sbjct: 132 PKAMAAAVDIIRAARRVEIYGIGSSAPIAEDAHYRLLRIGLDARVVIDSHVQAISASRCD 191 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 K + IS+SGS E V A + GA I IT+ SP++ A L T++ ET +R Sbjct: 192 KDVAVLTISHSGSTNETVAATRLAHEAGARTIVITNFGRSPIQAYADVVLFTMARETRFR 251 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 + +M++R AQ V D L L + S +++++ ++ Sbjct: 252 TEAMTSRIAQLCVIDALIAALALADYDRSTDVLKQTFDVLS 292 >UniRef50_D1AUV3 Transcriptional regulator, RpiR family n=5 Tax=Bacteria RepID=D1AUV3_STRM9 Length = 272 Score = 259 bits (663), Expect = 7e-68, Method: Composition-based stats. Identities = 58/282 (20%), Positives = 128/282 (45%), Gaps = 14/282 (4%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M Y+T I + F++ E K+AD++ + + ++ K++ +S+++IV+F +K+G Sbjct: 1 MKYITLIQSFYPSFSKQEIKVADYVIKEKDAICFMPLHEITKKINVSEATIVRFVKKIGF 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF + ++ + E + ++ N + + ++ T L+ Sbjct: 61 KGFIDFKLEVAREIATIEDERNTKEHY--------------IENIEYNIIETIKNTKNLI 106 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + ++ IE I + + + G+G S + + + M+ G +D H Q + Sbjct: 107 NKEDVENAIEAIENSKKLYVFGMGASGVAALEFQNRFMRFGKIGHSVSDGHFQVMYASTT 166 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + DV + IS SG +++ A++ G +IAIT+ SP+ +L+ + T ET Sbjct: 167 TEKDVIVVISLSGETVDLIYPLSIAKENGCKIIAITNYILSPIAKLSDIVILTSGKETLL 226 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 ++ ++ +Q + D+L G N ++ + Q +E Sbjct: 227 NGGALVSKMSQLYIIDVLATGYALRNSKKAKLVRQGMAEAIA 268 >UniRef50_UPI000196C511 hypothetical protein CATMIT_02677 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C511 Length = 286 Score = 259 bits (663), Expect = 9e-68, Method: Composition-based stats. Identities = 78/285 (27%), Positives = 153/285 (53%), Gaps = 8/285 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M +I +T E+ IA+++ N ++ S++ + ++ S ++I++F++K+G Sbjct: 9 MNAYIRIKEYNDSYTATEKLIAEYILEN--DILQDSAQALGEKTNTSAAAIIRFSKKIGF 66 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF++L+M L +++ +D++ + K R + +T L+ Sbjct: 67 KGFSDLKMNLAQSTKEEKQQEVDLI------FEPEDNISTLVEKGCRLNMNTVLKTYQLI 120 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + L++ I++++ A I + G+GGS+++G D+ KLM+IG +V AD HVQ T +Q++ Sbjct: 121 NIDTLEESIDLLNNASTIYLFGVGGSSVIGLDIYQKLMRIGKKVIYNADLHVQMTFAQSM 180 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + D + ISYSGS +V A ++ VI+IT + +P+ +L+ ++L S E Sbjct: 181 DQNDAALIISYSGSTTGLVDVARVLHEKQIPVISITQINANPISKLSTYSLKVPSEEKAL 240 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 R ++S+R + +TDLL+ G+ + N E K + S + LK Sbjct: 241 RIGAVSSRISSFVITDLLYYGVFKKNFEEHKKNLIDSKDNVSILK 285 >UniRef50_D2AGN5 Transcriptional regulator, RpiR family n=1 Tax=Shigella flexneri 2002017 RepID=D2AGN5_SHIF2 Length = 333 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 256/266 (96%), Positives = 258/266 (96%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 MLYLTKI NA SEFT NEQKIADFL+A VSEL+SVSSRQMAKQLGISQSSIVKFAQKLGA Sbjct: 68 MLYLTKIRNAESEFTGNEQKIADFLRARVSELKSVSSRQMAKQLGISQSSIVKFAQKLGA 127 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCAL Sbjct: 128 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALF 187 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL Sbjct: 188 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 247 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSL DSPLRRLAHFTLDTVSGETEW Sbjct: 248 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLADSPLRRLAHFTLDTVSGETEW 307 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLN 266 RSSSMSTRTAQNSVTDLLFVGLVQ Sbjct: 308 RSSSMSTRTAQNSVTDLLFVGLVQHQ 333 >UniRef50_Q04DU1 Transcriptional regulator n=2 Tax=Oenococcus oeni RepID=Q04DU1_OENOB Length = 282 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 65/284 (22%), Positives = 135/284 (47%), Gaps = 7/284 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 I + + E++IAD++ ++ + + + ++ ++GIS +SI +F + LG Sbjct: 3 NVTETIRSYYEKLHPGEKRIADYILSHQDSVMDATIQSLSDKIGISTASISRFTRHLGYP 62 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 F + +AL ++ + I D E I +KL AL T A ++ Sbjct: 63 NFRDFLIALSA-------SKKNSSSDFFTEIKQSDQSEQIVKKLFSAGIAALTATAANIN 115 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L ++++ + + I G+GGS++V + K ++ + D +Q + L Sbjct: 116 MKDLDRVVDWLVSSNKIGFFGIGGSSIVAFNAYHKFLRTNLNIVSHPDYDIQIMQAAHLT 175 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 D+ I IS+SG ++ +L R+ G+ ++AIT+ +SP+ + A L++ S E +R Sbjct: 176 SEDLGIVISHSGRNQDTLLVENKLRENGSKIVAITAFPESPIAKNADIVLNSYSEEVNFR 235 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 SMS+ AQ ++ D LF + + ++ ++I + ++ + Sbjct: 236 QESMSSLVAQITIIDTLFTLVGHRLNEQTDQVINSMRRVIEQTR 279 >UniRef50_A1AYM0 Transcriptional regulator, RpiR family n=3 Tax=Proteobacteria RepID=A1AYM0_PARDP Length = 287 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 78/281 (27%), Positives = 136/281 (48%), Gaps = 7/281 (2%) Query: 5 TKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFT 64 +I T E ++ D + + + RQ+++ G+S + +VK A+KLG GF Sbjct: 12 AQIRMKLPFLTPLEARVVDTITGRNDLDLTTALRQVSEDAGVSDAMVVKIAKKLGFNGFR 71 Query: 65 ELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYAR 124 + R AL+ LHS I+ +DS I RK+ + ALE+T +++D + Sbjct: 72 DFREALV-------VYRQTDVASLHSEISPEDSSADIIRKVFQTSIQALEETMSIIDVSA 124 Query: 125 LQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD 184 + ++ A G+GGSA + RD++ K ++IG R + D H+ + L D Sbjct: 125 FDRAATLLHGARQRDFYGVGGSAQIARDVAHKFLRIGLRAGVQDDPHMMLMSAALLGPED 184 Query: 185 VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSS 244 V +A S+SG+ ++ A AR+QGA VIAIT+ +PL LA L + + + + Sbjct: 185 VVVAFSHSGTTSNVIEAARLARQQGARVIAITNYATAPLSELADIALCSTAQGSPLLGEN 244 Query: 245 MSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + R AQ ++ D +FV + Q + + + R+ + Sbjct: 245 AAARIAQLNIMDAIFVAVAQRDLERAEAQLARTRNAVDNKR 285 >UniRef50_A4EAC5 Putative uncharacterized protein n=2 Tax=Collinsella RepID=A4EAC5_9ACTN Length = 283 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 76/265 (28%), Positives = 133/265 (50%), Gaps = 5/265 (1%) Query: 15 TENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEY 74 + E+ + ++ A+ E+ +S R +A S SSI++F ++LG G+ E + LI E Sbjct: 17 SPAERNVIAYVSAHPHEVVGLSVRGLADVTFSSPSSILRFCKRLGFAGYKEFQRELIAEL 76 Query: 75 SASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISK 134 + +K + I+ DDS+E I K+ + +E T LDY L++ + + Sbjct: 77 ALLGDKKDVAL----EDISMDDSVERIVGKVMKSNVRTIEATARTLDYTVLERCAARLKR 132 Query: 135 APFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGS 194 A + + G+G S LV DL+ KLM++ D H Q ++ + +GD+ IA SYSG Sbjct: 133 ARAVNLFGIGASRLVAHDLAQKLMRVDKECRLYDDWHDQLLCAKNMHEGDMAIAFSYSGL 192 Query: 195 KKEIVLCAEAARKQGATVIAITS-LTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNS 253 +E++ C A++ V+A+T S L +A L + E RS +M++R AQ Sbjct: 193 TQEVLDCTAEAQRHNCPVVAVTKVDGSSKLATMADAVLGVAASEPLVRSGAMASRMAQLM 252 Query: 254 VTDLLFVGLVQLNDVESLKMIQRSS 278 V D L+ V + + +I+++ Sbjct: 253 VVDALYAAYVASDYERATHVIKQNY 277 >UniRef50_Q184N2 Putative phosphosugar-binding transcriptional regulator n=4 Tax=Clostridium difficile RepID=Q184N2_CLOD6 Length = 283 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 80/284 (28%), Positives = 150/284 (52%), Gaps = 6/284 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M + K+ + TE ++KIAD++ N + +S ++A S +SIV+F++K+G Sbjct: 1 MSCILKLKQIYEDLTEVDKKIADYILNNTEAISKLSVSELASNSKTSTASIVRFSRKMGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF +L++ + + + + + D +++ + K+ + + QT L Sbjct: 61 SGFGDLKIEIAKDLMGKENE------YTYVDENYDCNIDSVINKITNKNIETINQTRLLN 114 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + +++ +E I KA + I G+GGSALV DL KL++I + D+H Q VS + Sbjct: 115 EKDIIKEAVEQIIKAKNVYIFGVGGSALVALDLQMKLLRINKQAFTSLDSHTQLMVSSNV 174 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 K D+ IAISYSG KE++ E A+ +G VI IT +D+ L +++ L + E Sbjct: 175 DKEDIAIAISYSGESKEVIKSIENAKLKGCKVICITKYSDNHLSKISDLKLVVPNIEKRL 234 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 R ++S+R A ++ D++++ ++Q N E+ + +Q + + L Sbjct: 235 REGAISSRIAMLTLIDIIYISIIQENLNEAEQKLQETKRILDYL 278 >UniRef50_C2D3P4 RpiR family transcriptional regulator (Fragment) n=3 Tax=Lactobacillus RepID=C2D3P4_LACBR Length = 281 Score = 257 bits (657), Expect = 4e-67, Method: Composition-based stats. Identities = 64/281 (22%), Positives = 117/281 (41%), Gaps = 6/281 (2%) Query: 5 TKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFT 64 + + + +KIA ++ N + +A S +S+ + + LG F Sbjct: 6 QMLKQSFDNLSRTNKKIAKYVIDNPQAASEANIEDLAAVTETSTASVSRLVKTLGYSNFR 65 Query: 65 ELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYAR 124 E ++L + L + I ++D+L IA K+ + AL+ T +D Sbjct: 66 EFTLSLAY------TQLRPQNLPIFKDIDANDTLSTIADKIFTSSQRALQDTREGIDENE 119 Query: 125 LQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD 184 + + I + GLGGS++ D K ++ D VQ + L + D Sbjct: 120 FARSVLRIIHCRRLGFFGLGGSSVAALDGYHKFLRTSIDCFYYPDFDVQLMQAVKLGEDD 179 Query: 185 VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSS 244 I +S+SG ++ + AE +++ VIAITS DSPL + T + S E+ +RS Sbjct: 180 CAIVVSHSGKNRQTIKIAETLKRRKVPVIAITSYQDSPLVGHSDITFISSSDESNYRSEG 239 Query: 245 MSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 M + AQ ++ D LF+ + I+ + + + Sbjct: 240 MYSLLAQLTIIDTLFMMATVRMGPATEDTIRSVQNIIESTR 280 >UniRef50_A0AJB4 Complete genome n=7 Tax=Bacillales RepID=A0AJB4_LISW6 Length = 283 Score = 257 bits (657), Expect = 4e-67, Method: Composition-based stats. Identities = 76/285 (26%), Positives = 134/285 (47%), Gaps = 8/285 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + +I + +E+KI + AN + S ++A++ S +++V+F + +G Q Sbjct: 5 SIINRIEGILHDLPTSEKKIGQTVLANPEFTTTASIHKLAQKADASGAAVVRFCKSIGLQ 64 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 F EL+ L + + ++ + I ++ I KL + T + LD Sbjct: 65 SFPELKRQLSLDLAQPQK-------IGYYDIEPNEDFHTITDKLVSNMMQTMNDTASQLD 117 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 ++ +++ A I G+G S LV D+S K ++ G V D HV A K Sbjct: 118 ETKVLTACDLLGDADTIYTYGVGASWLVAEDISQKWLRAGKHVLATQDAHVLAMAFATGK 177 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTV-SGETEW 240 + V IAIS SG E++ + A+ TVI++T ++ L+ A L+T + E E Sbjct: 178 RKSVFIAISNSGETSEVLQLVDQAKLNDVTVISLTRFGNNKLKEKADLALETSRAPEAEI 237 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 RS++ S+R AQ V D+LF + E ++ I++S E T R + Sbjct: 238 RSTATSSRQAQLLVVDILFYYYASHHYDEMIQQIKQSREATNRFR 282 >UniRef50_C2D9S0 RpiR family transcriptional regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9S0_9ACTN Length = 282 Score = 256 bits (656), Expect = 5e-67, Method: Composition-based stats. Identities = 76/275 (27%), Positives = 124/275 (45%), Gaps = 5/275 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L + + +EQ+I ++ + V+ ++A+ +S ++I + +KL Sbjct: 5 SLLVLLKENKDRVSTSEQQIITYILKKPEAIVGVTIHELAQMTFVSAATISRLLRKLSLG 64 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ E + LI E ++ + ++ I DS + I K+ R+ ++ T L + Sbjct: 65 GYKEFQQYLIYELASMKTSRQSSI----EDINPKDSTKQIMFKIMRKTIESITLTEKLNN 120 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + E+I A I I G+G S L +DL +K ++ AD H+Q + + Sbjct: 121 PKTIDSCAELIHNARHITIFGMGSSLLSAQDLQYKFLRANIDCTLSADWHMQLIAANNMS 180 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSP-LRRLAHFTLDTVSGETEW 240 GDV IA SYSG E + C AA+ G VIAIT +S L R A L S E Sbjct: 181 DGDVAIAFSYSGVTPETLRCVHAAQDHGGKVIAITRSVNSTELVRHADIVLYVASTEPLL 240 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQ 275 RSS+ ++R Q + D LF LV + I+ Sbjct: 241 RSSAGTSRITQLMIVDTLFSTLVNKHYDVYATAIE 275 >UniRef50_Q9K6Z8 Transcriptional regulator (Hex regulon repressor) n=2 Tax=Bacillus RepID=Q9K6Z8_BACHD Length = 284 Score = 256 bits (656), Expect = 5e-67, Method: Composition-based stats. Identities = 77/284 (27%), Positives = 148/284 (52%), Gaps = 5/284 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + L KI + F E K+A+++ + + +++++Q+A+Q SQSSIV+F ++LG + Sbjct: 5 MLLAKIEQELASFPAAETKVANYVLKHPELVPTMTTKQLAEQANASQSSIVRFCKRLGLE 64 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 F +L++AL E + N+ +L + +DDS ++ +K++ ++AL+ ++ Sbjct: 65 SFPKLKLALAKELTRKEAYINSASL-----LETDDSPPILFQKVSSLNQMALDMATKAMN 119 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + +E + KA I G+GGS D +K M++G+ D H + Sbjct: 120 EQAFTEAVEQMVKAKKIAFFGVGGSFTSCIDGQYKFMRLGFHSLASGDYHQMIPFITMMD 179 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 + DV I +S SG+ KE++ A+ A+++ +I IT+ + S L R A +L E + R Sbjct: 180 EQDVVICMSTSGNTKEVLDIADYAKERNVKLIGITASSRSALTRKAAVSLLIPDIEVQQR 239 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S+++RT+Q +V D L+V + + L S + T+ + Sbjct: 240 IGSIASRTSQLNVIDALYVSVFHRIGSDLLDAFDASRKKTEEKR 283 >UniRef50_C4KZ09 Transcriptional regulator, RpiR family n=85 Tax=Bacillales RepID=C4KZ09_EXISA Length = 301 Score = 256 bits (656), Expect = 5e-67, Method: Composition-based stats. Identities = 75/284 (26%), Positives = 150/284 (52%), Gaps = 5/284 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 LTKI A + T E+KIAD++ ++ + + +++++++A++ +S++SIV+FA+ +G Sbjct: 22 SLLTKIDLAKEDMTAVEKKIADYILSHSTLIPNMTTKELAQKTDVSEASIVRFARVVGID 81 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 F ++AL+ + + + + + D+ +K+ + A+E +D Sbjct: 82 SFKAFKLALVKDLAVTETTLTDFNV-----LQQKDTPYDSFQKVIHVNKAAIEACAEAMD 136 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L+ +++ ++A + G+GGS+ D +K K+GY D H ++ L Sbjct: 137 KRELEHAVDLFARASRVIFYGVGGSSTAAIDAQYKFTKLGYAATTSPDFHYMLSLIPHLG 196 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 K DV +AIS SG K+++ A+K+ VIAIT+L SPL R A L T + E+++R Sbjct: 197 KSDVFVAISTSGRTKDVLELVRFAKKKRVPVIAITNLDKSPLYREADVRLCTPNVESDFR 256 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +S+++R Q ++ D L++GL+ + + + +L+ Sbjct: 257 IASIASRMTQLTIIDTLYMGLLHRKGEGLIDRYAEARDEMVKLR 300 >UniRef50_C0D4M2 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D4M2_9CLOT Length = 282 Score = 256 bits (655), Expect = 6e-67, Method: Composition-based stats. Identities = 68/283 (24%), Positives = 138/283 (48%), Gaps = 6/283 (2%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 + I + + +++ +AD++ N ++ + ++A +S++++++F KL Sbjct: 5 IFSLIRTKYNTLSSSQKDVADYILTNPDKVMMNTLNEIAAACRVSETTVLRFLHKLNYNS 64 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 + R+ L E S ++T ++ + D+ + I K+ ++ + ++D Sbjct: 65 YQLFRINLTQELSKDNQET------VYDDVGFQDTEDEIIDKIIHSTVSSITDSRQIIDP 118 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 A ++ ++E I+ A I + G+G S + +DL KL+K+G C D H+ ++ L + Sbjct: 119 ASVKAVVEKIAGARRIVVAGVGASGFIAQDLYHKLIKLGLNAVCANDPHIMNILATGLDQ 178 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 + I S+SG +E++ A A+++ V A+TS S L A + L + S ET +RS Sbjct: 179 NTILILFSHSGESREVLDMAAIAKERRCQVCAVTSYAKSTLANQAGYLLCSSSRETMFRS 238 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +M++R Q + D+L+V LV L I S + K Sbjct: 239 DAMTSRIVQMVIIDILYVSLVIALGDGILPQIHSSRLAVAKNK 281 >UniRef50_A4VXR0 Transcriptional regulator n=5 Tax=Streptococcus suis RepID=A4VXR0_STRSY Length = 275 Score = 256 bits (654), Expect = 7e-67, Method: Composition-based stats. Identities = 74/281 (26%), Positives = 145/281 (51%), Gaps = 9/281 (3%) Query: 5 TKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFT 64 ++++ T E K+ D+++ N+ +++++ Q+A G+S ++I + ++K+G F Sbjct: 4 NILNHSIENLTPTENKLLDYIEENIHRIETMNIYQLADNAGVSTATISRISKKMGYSNFN 63 Query: 65 ELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYAR 124 +L++ + + L++ T DS++ I+ KL ++ +QT + L+ Sbjct: 64 KLKIEIAK---------SKYDDLLNAHFTPSDSIDDISTKLIHSITISNQQTVSFLNLEE 114 Query: 125 LQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD 184 L+ ++++ A I + G+G S +V D +KL +IG DTH+Q GD Sbjct: 115 LEAAVKLLQSASRIYLFGVGASGIVCSDFYYKLSRIGKTCIFAQDTHIQMANIATAGNGD 174 Query: 185 VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSS 244 + I ISYSG KE+V A++ G + I IT + L LA T E E R + Sbjct: 175 LAIGISYSGMTKEVVEPLRFAKENGVSTITITGTGKNQLADLADITFRIPRHEHELRVGA 234 Query: 245 MSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +++R+ +TDLL++ L+Q + E +++++ LT+ +K Sbjct: 235 ITSRSNSLFLTDLLYLALIQDHKQEITAILEQTKHLTEVIK 275 >UniRef50_A6UCC0 Transcriptional regulator, RpiR family n=4 Tax=Proteobacteria RepID=A6UCC0_SINMW Length = 296 Score = 256 bits (654), Expect = 8e-67, Method: Composition-based stats. Identities = 69/284 (24%), Positives = 124/284 (43%), Gaps = 8/284 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L I ++ ++++K+A+ + A+ + + + + A+ G+SQ ++++F +G Q Sbjct: 16 NILEVIRLRRADLRKSDRKVAELVLADPKRVINATIAEAAEWAGVSQPTVIRFCASIGCQ 75 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ + ++ L + T HS I + D+ ++ K+ +L+ LD Sbjct: 76 GYQDFKLRLAQSLALGMSAT-------HSVIDASDTPAQVSAKIFDYTITSLDWVRNHLD 128 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 ++ + I+ +SKA I+ G G S +V RD K G E D H Q V LK Sbjct: 129 PVQVSRAIDALSKASRIEFFGFGASGIVARDAQQKFPLFGVPCGAETDAHQQIMVVSMLK 188 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 GDV + IS +G+ I+ A AR+ G VI I D PL L + E Sbjct: 189 PGDVAVVISNTGATLAIIETARRARESGCQVIGIVGS-DGPLVEFCDIVLMVETLENTNI 247 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + +R A +V D+L + E + + + L+ Sbjct: 248 YTPTISRIAALTVIDILSTSVALRRGAEHVDLFTGMKRNLRYLR 291 >UniRef50_A9BXM8 Transcriptional regulator, RpiR family n=16 Tax=cellular organisms RepID=A9BXM8_DELAS Length = 323 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 66/287 (22%), Positives = 120/287 (41%), Gaps = 12/287 (4%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 L +I+ + EQ++A + A+ R++A++ +S+ ++V+F + +G G Sbjct: 43 MLDRITASLPSLAPAEQRVARLVLADPRAFARQPVRELAERAHVSKPTVVRFCRSMGYDG 102 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 + ++ L G S +H S+ +DD + K+ A Q Sbjct: 103 LADFKLKLAGSVSEG-------VPFIHRSVDTDDKTSDVMVKVVDNAVAAFLQYRNAAST 155 Query: 123 ARLQKIIEVISKA----PFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQ 178 +++ + I+ I+ G G S +V +D K ++G +D H+Q + Sbjct: 156 TAIEQAAQAIASTWQTGRRIEFYGAGNSGIVAQDAQHKFFRLGVTSLATSDGHMQVMSAT 215 Query: 179 ALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGET 238 L GD + IS SG ++++ A+ ARK GAT IAIT+ SPL H L E Sbjct: 216 LLGPGDCAVIISNSGRTRDLMDAADIARKNGATTIAITASG-SPLASACHIHLAADHPEG 274 Query: 239 EWRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 R S M +R V D+L + +++ + + Sbjct: 275 YDRYSPMVSRLLHLLVIDVLATCVALRIGPALQPALEQMKNNLRAKR 321 >UniRef50_C1I531 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I531_9CLOT Length = 284 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 74/274 (27%), Positives = 143/274 (52%), Gaps = 2/274 (0%) Query: 11 GSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMAL 70 SE T+ E KI D+++ ++ ++ ++A G+ ++++ +F +KLG + F E +M + Sbjct: 9 RSELTKAENKICDYIEEYMNSSIYMTVTEIANNCGVGEATVTRFCRKLGFRSFLEFKMTM 68 Query: 71 IGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIE 130 E+ + + ++ +DSL +K +LE+T +DY+ +++I + Sbjct: 69 AQEF--KNSGYDNEDIIESEVVSENDSLGEFVKKFYEINVNSLEETLKKIDYSMIEEISD 126 Query: 131 VISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAIS 190 ++ KA I TG+G S ++ D +K MKIG C D+H ++ +K+GDV IS Sbjct: 127 ILVKAKRISFTGVGHSGIIAEDAYYKFMKIGLICNCYRDSHTLVMMASLMKEGDVLFIIS 186 Query: 191 YSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTA 250 SG+ +EI + AE AR+ VI+IT S L R++ + L+ E + S R + Sbjct: 187 NSGNTEEINIAAEIARENNVKVISITENLLSKLARVSDYVLNYTDQEIKIDMESFGIRIS 246 Query: 251 QNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 QN + DL+ +++ N ++ ++ + ++L Sbjct: 247 QNFLIDLICTNVIRKNKEIAVVSKSKTEKAIEKL 280 >UniRef50_C2C2H3 Bifunctional RpiR family transcriptional regulator/sugar isomerase n=1 Tax=Listeria grayi DSM 20601 RepID=C2C2H3_LISGR Length = 282 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 77/285 (27%), Positives = 141/285 (49%), Gaps = 9/285 (3%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L +I + ++E+K+A+ + + + + S +AK+ S ++IV+F + LG + Sbjct: 5 SILNRIETLFKDLPKSEKKVAEMVLQDPAFASASSIHSLAKRADTSAAAIVRFCKSLGLK 64 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 F + + L E S+ + D+S + I++KL L T + Sbjct: 65 SFPDFKRQLYSELSS-------PVASGYYDFEEDESFDGISQKLLANYFQTLNDTAGQIS 117 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 A+++ + E + KA I G+G S LV +D++ K ++ G +V D HV A A K Sbjct: 118 EAKIRTVSEQLEKADTIYTYGVGASWLVAQDIAQKWLRAGKQVVISQDEHVLAMAFAARK 177 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTV-SGETEW 240 G V A+S SG ++ AE A++ TVI +T S L+ A F L+T + E ++ Sbjct: 178 SG-VFFAVSNSGETTSVIELAEQAKQNNLTVIGLTRFGPSKLKAKADFLLETSRAPEAKF 236 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 RS++ S++ AQ + D+L+ V + + ++ I+ S + T R + Sbjct: 237 RSTATSSKQAQFFIIDVLYYHYVSRHYDQMIEQIRESRQATDRFR 281 >UniRef50_A8F3D9 Transcriptional regulator, RpiR family n=1 Tax=Thermotoga lettingae TMO RepID=A8F3D9_THELT Length = 276 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 74/285 (25%), Positives = 130/285 (45%), Gaps = 16/285 (5%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 T I +FT+ E ++A F+ + E+ +S ++ +L I Q ++V+F QKLG Sbjct: 4 DVQTIIKANQKQFTKKENELAQFVIDHPDEVIHMSITEIVDELRIGQGTVVRFCQKLGFS 63 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL- 120 GF ++AL E + + + + + + A+E+T LL Sbjct: 64 GFHPFKIALAKSLGRQEE--------------ASEGSKDMLAMVKEDHIKAIEETSKLLK 109 Query: 121 -DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQA 179 + + + E IS + + G+G S + D +K M+IG V D H QA Sbjct: 110 LNEKVVYQCAEKISNCRRLYLLGVGASGVTALDAYYKFMRIGVDVKYMLDPHFQAMSLSG 169 Query: 180 LKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETE 239 + D +A S SGS +V A+ A++ A VIA+T SPL A F L T E Sbjct: 170 CNEKDCVVAFSQSGSTAVVVDMAQIAKQNKACVIAVTGYNKSPLTFYADFVLLTAVRENP 229 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 ++S ++ ++ AQ V ++LF L ++ + + R++ ++ Sbjct: 230 FQSGAIRSKIAQLHVLEVLFEQTKLLLADKAKQNVDRTARSVEKW 274 >UniRef50_C5CG85 Transcriptional regulator, RpiR family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CG85_KOSOT Length = 275 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 64/284 (22%), Positives = 130/284 (45%), Gaps = 10/284 (3%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + + ++ +E+E+++A ++ ++ + ++AK S++++ + +KLG Sbjct: 1 MIIVQLKGIYDSLSESERRVAKYIIERPDDVIHYTITELAKFSHSSEATVYRLVKKLGFS 60 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ +++L E S +E S+ S + ++ +E ++T A+LD Sbjct: 61 GYQSFKISLARELSIPQEVIEE---------GSEGSYQNFVERIVQENISLAKETMAVLD 111 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L+K +E+I A + G+G SA+V + SF +G+ D H Q V+ L Sbjct: 112 LDALKKAVELIINARRLVFFGVGRSAVVAQSGSFNFALLGFSSTHYIDPHAQVMVASGLT 171 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV + IS++G+ ++ V + A GA I ITS +SP+ + L T +G Sbjct: 172 NEDVVVGISHTGTIRDTVKSVQVAHAAGAKTIVITSGINSPITEVGDVVLYTAAG-KPST 230 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S +R + + D+L+ +V K + E+ + + Sbjct: 231 SEFTVSRIGEFLILDILYKTVVARMSERLSKHFDKLEEILKPKR 274 >UniRef50_B8KWX3 Bifunctional protein glk n=3 Tax=unclassified Gammaproteobacteria RepID=B8KWX3_9GAMM Length = 337 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 65/284 (22%), Positives = 125/284 (44%), Gaps = 8/284 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L I+ + ++E K+A + ++ +S +A + G+S+ S+ +F ++ GA Sbjct: 52 NLLEDINQSLPGLNKSEVKVAQAILSDPDAATRMSIASLASRAGVSEPSVNRFCKRFGAS 111 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF + ++ L + ++ ++ D ++ KL AL L Sbjct: 112 GFPDFKLRLATSMVSG-------VRYISRAVEFSDDIDTYPGKLFDNAISALVAAKEQLP 164 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + + ++ +++A I GLG SA V +D K + V D +Q ++ A Sbjct: 165 TGDIARAVDFLAQARRIHFFGLGTSAAVTKDAEHKFFRFNVPVTNHQDPLMQRMLAAAGS 224 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 GDV IS++G + +V AE AR+ ATV+++T+ SPL + + + GE Sbjct: 225 VGDVFFIISHTGRTRALVEVAELARQTEATVVSLTA-PQSPLAQESDCAITLTIGENTEE 283 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 M++R Q +V D+L G+ L + R + + + Sbjct: 284 YLPMTSRLVQLAVIDVLATGVTLRRGERFLPHLARIKDSLKATR 327 >UniRef50_B9K581 Transcriptional repressor of rpiB expression; transcriptional repressor of ribose catabolism (RpiR/YebK family) n=3 Tax=Proteobacteria RepID=B9K581_AGRVS Length = 291 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 75/280 (26%), Positives = 135/280 (48%), Gaps = 7/280 (2%) Query: 6 KISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTE 65 +I T E K+ D + + S +Q+A+ G+S++ +VK +KLG GF + Sbjct: 14 RIRMMMPMLTPLEAKVVDTVFGMRDFSEETSLKQIAENAGVSEAMVVKITKKLGFSGFRD 73 Query: 66 LRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARL 125 R ++ +H ++ DD+ I +K+ R ALE+T A+LD A Sbjct: 74 FRSSVSQ-------YNRQPTTEMHQELSVDDTSLEIVQKVFRTSIHALEETLAILDMAAF 126 Query: 126 QKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDV 185 + ++I KA G+GGSA + RD++ K ++IG R + D+H+ + L DV Sbjct: 127 DQAADMIHKARNRDFYGVGGSAQIARDVAHKFLRIGVRASVFDDSHMMLMSAALLADTDV 186 Query: 186 QIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSM 245 I S+SG+ ++ + ARK GA+ IA+T+ S L + A L + + + + Sbjct: 187 AIGFSHSGNTIAVIEALQLARKNGASTIAVTNYGSSALAQSADVVLCSTAQGSPLMGENA 246 Query: 246 STRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + R AQ ++ D +FV + Q + + + + R+ + Sbjct: 247 AARIAQLNILDAIFVAVAQRDYQAAERNLDRTMSAVTSKR 286 >UniRef50_Q02VU4 Transcriptional regulator n=4 Tax=Lactococcus lactis RepID=Q02VU4_LACLS Length = 282 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 65/284 (22%), Positives = 129/284 (45%), Gaps = 7/284 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 +++I + ++++Q I+D+L AN+ +S ++ A++ +S ++I +F++K+G Sbjct: 4 TLISRIRSYYDNLSKSDQAISDYLIANIDSAAMLSIQEFAQKTQVSTATISRFSKKIGFN 63 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 F EL++A+ + S ++ D + I K +L T L+ Sbjct: 64 SFQELKLAI-------HATDSTRDDEFFSELSPTDDYKEILTKNFNGNISSLNSTLNLIS 116 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 +L + +E++ KA GLGGS V K +++ D H Q + L Sbjct: 117 NRQLDQTMEILLKANTCGFFGLGGSNAVALIAFHKFLRMPLHCVYHQDFHFQQMQAAKLT 176 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 D IS++G K+ + E + +G +IA+TS SPL + A L ++S E +R Sbjct: 177 SEDCAFVISHTGKNKDTMHLVEILKSRGVPIIALTSFASSPLAKAADVALISISEEISFR 236 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 ++++ +Q S+ D LF+ S + ++ + Sbjct: 237 PEAVASTVSQISLLDALFMMYGMKMKDVSEGTLSEIRKVISDSR 280 >UniRef50_Q38YX9 Gluconate operon transcriptional regulator, RpiR family n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38YX9_LACSS Length = 280 Score = 253 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 75/283 (26%), Positives = 136/283 (48%), Gaps = 8/283 (2%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 + + + F+E ++IAD++ Q ++ ++ A G+S ++I +FA+ LG Sbjct: 5 IDSLLRSYYDNFSEKYKQIADYIFQESQFNQRLTIQEFAANCGVSTATISRFAKILGFDN 64 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 F +MAL+ A L I ++D+ +A K+ AL+ T +LL Sbjct: 65 FQAFKMALLA--------KEANTSPLFHEINANDTFTTMAEKIFSSNSNALKATWSLLTE 116 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 +LQK + +I++A + + GLG S +V +D K ++ D H+Q + L Sbjct: 117 EQLQKAVALINRAHLLSLFGLGASGIVAQDGYHKFLRTSIPTVFNQDYHLQLMQATKLTN 176 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 D I IS+SG K+ + A +++ +I ITS +S L +L TL ++S ET +R+ Sbjct: 177 QDCAIIISHSGQNKDALELARILKERQVPLIVITSFGNSSLAKLGDITLLSISEETNYRA 236 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 ++ AQ S+ D LF+ + N E+ + + R + Sbjct: 237 EALHALIAQISLIDSLFMMVAVNNGQETEQSFKEIRAEIDRTR 279 >UniRef50_C1XRD4 Transcriptional regulator n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XRD4_9DEIN Length = 264 Score = 253 bits (647), Expect = 6e-66, Method: Composition-based stats. Identities = 65/270 (24%), Positives = 121/270 (44%), Gaps = 9/270 (3%) Query: 14 FTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGE 73 T ++IA ++ N ++ + ++A G S++S+V+F + LG QGF + ++AL + Sbjct: 1 MTPALERIAQYVLHNADQVIYQTVIEVADAAGSSEASVVRFCRDLGFQGFQDFKLALASD 60 Query: 74 YSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVIS 133 T+ + S + A + L++T L++ L++++E I Sbjct: 61 L--------VTSPVILPKQEKPTSAQSTADYVYNTARQVLDETRRLMNVDLLEEVVERIL 112 Query: 134 KAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSG 193 KA I G+G + +D + KL ++G D H A + L D+ IS SG Sbjct: 113 KARRIDFYGVGNAGTTAQDFAQKLQRLGCAAIAYPDPHSAAVSAATLGPKDLAFGISVSG 172 Query: 194 SKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNS 253 S + V E A+ GA +A+T SP+ R A L T + E+ SM + +Q Sbjct: 173 SSIDTVKALEQAKLAGAYTVAVTRGARSPITRFADAVLLTSAPESPLTRGSMGAKISQLM 232 Query: 254 VTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 + D LF + + +++ +++ Sbjct: 233 LLDFLFTRTALRH-PKGAELLSKTAAAVAD 261 >UniRef50_A0JVW9 Transcriptional regulator, RpiR family n=2 Tax=Actinomycetales RepID=A0JVW9_ARTS2 Length = 309 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 61/282 (21%), Positives = 134/282 (47%), Gaps = 5/282 (1%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 L +IS + +++A+ + + + Q+++ ++A G+ +S++ +F ++LG G Sbjct: 10 LLHRISGRLPYLPPSLRQVAEAVLKSPEQAQTMTISELAVAAGVGESTVSRFVKELGIDG 69 Query: 63 FTELRMALIGEYSASREKTNATALH---LHSSITSDDSLEVIARKLNREKELALEQTCAL 119 + + + L S+ T+A ++ + D+ IA K+ R +L +T Sbjct: 70 YKSMLLGLAEATFISKAATSARTADSEVVYEGVNRGDTAAEIAGKVERSSVQSLRRTGQR 129 Query: 120 LDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQA 179 D +Q+ +++I + + + +G S++ + + + G + DT +Q ++ Sbjct: 130 QDVEAIQRAVDLIDASNTVIFSCMGSSSIAAEEAVMRFTRAGKKCMLYRDTTIQVMLAAI 189 Query: 180 LKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVS--GE 237 ++ GD+ I IS SG I+ AR++GA IAIT SPLR A L T + Sbjct: 190 IEPGDLLIGISDSGRSTPIIDAMHLARQRGAATIAITGAEGSPLRNYADVVLYTATVPSG 249 Query: 238 TEWRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSE 279 E S++++ Q V D+L+ + +++ ++++ + Sbjct: 250 GELYGESVTSKWGQLLVIDILYATYASRHYDATVEHLKQTYQ 291 >UniRef50_P26833 Uncharacterized HTH-type transcriptional regulator CPE0189 n=15 Tax=Clostridiales RepID=Y189_CLOPE Length = 279 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 71/281 (25%), Positives = 150/281 (53%), Gaps = 5/281 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L ++ N + T++E+ + +++++++ + S +AK+ G+ +++I +F +KLG Sbjct: 1 MGILEQLENPKFKATKSEKTLIEYIKSDLDNIIYKSISIIAKESGVGEATITRFTKKLGF 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF + ++ L E S + + ++ + D+S+ A K+ + LEQT + Sbjct: 61 NGFQDFKVTLAKEISNKKNTSI-----INLHVHRDESVTETANKMLKSSINILEQTVKQI 115 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D + K ++I A + G+G S + D+++K M+IG+ D+H +S Sbjct: 116 DLDLMCKCRDLIMNAKRVYFIGIGYSGIAATDINYKFMRIGFTTVPVTDSHTMVIMSSIT 175 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 DV +AIS SG+ KE++ + A++ G +I +T +D+PLR+L+ + L S ET + Sbjct: 176 NDDDVIVAISNSGTTKEVIKTVKQAKENGTKIITLTEDSDNPLRKLSDYELTYTSAETIF 235 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 + S+S++ Q + DLL+ +++ E+++ +++ Sbjct: 236 ETGSISSKIPQIFLLDLLYTEVIKEMFSEAVEKKIKTTSAI 276 >UniRef50_Q9CKN4 Putative uncharacterized protein n=1 Tax=Pasteurella multocida RepID=Q9CKN4_PASMU Length = 286 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 114/284 (40%), Positives = 182/284 (64%), Gaps = 2/284 (0%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M +L K+ + + NEQ+IADF+ + E++S SS+ +A Q+ +SQS+I+KF+QKLGA Sbjct: 1 MGFLIKLKHTYPSLSPNEQRIADFILKHPHEVKSSSSKALANQIAVSQSAIIKFSQKLGA 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 F++ ++A+ E +E + +HLH SIT D L IA KL EK+ AL+++ +L Sbjct: 61 DKFSDFKLAIS-EALIRQETQSEPRVHLHDSITDKDDLSEIAEKLFVEKQQALKESLSLN 119 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + +++E + +A IQ+ G+G SALV +D +KL KIG V E DTH +SQ+L Sbjct: 120 AIPYVARVVEQLMQAKRIQLMGIGNSALVAKDFFYKLTKIGLPVVTETDTHASLAMSQSL 179 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 D+ IS+SG +EI+L AE A+ + +IA+T+LT +PL LA + L +V+ E+ + Sbjct: 180 TPQDILFLISFSGRHREILLAAENAKARQIKIIALTALTTNPLHELADYLLYSVADESTF 239 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 RSSS+++RTAQ+++TDLLF+G++Q + +I S L +L Sbjct: 240 RSSSIASRTAQHAITDLLFMGILQ-QKEHANDLILESRALIGQL 282 >UniRef50_B7RYI4 Transcriptional regulator, RpiR family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RYI4_9GAMM Length = 278 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 79/285 (27%), Positives = 130/285 (45%), Gaps = 8/285 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M LT +++ S+ +++ KIA + AN + + ++ +A Q G+S+ ++ +F LG Sbjct: 1 MTLLTDLADPLSKRSKSAHKIAACVVANPEAILASTTASLAAQAGVSEPTVNRFCTGLGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF + +++L E + + + I DDS +A K+ + +L T L Sbjct: 61 KGFPDFKLSLAAELARKQ-------PRMTRDIDPDDSAAKVAAKIFESTQASLSNTQDHL 113 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D A LQ ++ +S A I + GLG SA V D KL++ + D Q V+ L Sbjct: 114 DLAALQDVVAAMSNARSIALCGLGASASVALDAQHKLLRFPIPIMAHTDIINQRVVAAGL 173 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 D+ I ISY+G ++ AE A +G V ITS SPL L SGE Sbjct: 174 GADDLLICISYTGRTTAMIELAELAVSRGCQVAGITS-PHSPLANTCPLVLGVESGEDTD 232 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 R + M++R AQ + D+L L +Q + + Sbjct: 233 RYTPMTSRIAQLVIIDILATCLALEQGEAFADHLQEVKRNLSQTR 277 >UniRef50_C0CU66 Putative uncharacterized protein n=2 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CU66_9CLOT Length = 285 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 54/284 (19%), Positives = 125/284 (44%), Gaps = 4/284 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L I + T E+K+AD++ + E+ ++ +++ G+ +++ +F + + Sbjct: 5 NLLISIRSCYDRLTRLEKKVADYVLQHPQEVVKMTINELSNSCGVGDTTVFRFCRSMNVG 64 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ + ++AL S + ++ L +A++++ A+ +T + LD Sbjct: 65 GYQDFKLALA----LSSNVNDMLDSKGEFNLAQSHDLHELAQQVSGVFTDAVNETLSSLD 120 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 Y + + +E I A + + G G S + + ++M+I + +D H+Q T + ++ Sbjct: 121 YDAISRTVEAILNARSVHLFGFGNSGVSALMMQNRMMRILPNIFYTSDVHMQLTSAATMQ 180 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 + V I SG K+ + A+ + GA + IT +P A L + + E + Sbjct: 181 EDSVAIIFCNSGITKDSIRIAQMTHEAGAFTVFITKFMQTPAAPYADVLLCSGATEGPIQ 240 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S+S +Q + LL+ L + + + + +++ K Sbjct: 241 GGSISGVASQMYIVMLLYSELFRRMETRAQENKIKAAHAIAEKK 284 >UniRef50_D0GPL3 Transcriptional regulator, RpiR family n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GPL3_9FUSO Length = 285 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 69/279 (24%), Positives = 146/279 (52%), Gaps = 7/279 (2%) Query: 7 ISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTEL 66 I ++ ++ E+ IAD++ N+++ +++ +A+ +G+ S+I F +KLG +GF E Sbjct: 10 IKTIYNDLSKKEKLIADYILKNINKSTNLTIADLAENIGVVNSTIFSFTKKLGFKGFREF 69 Query: 67 RMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQ 126 R +L+ + + +++H I+ +DS+ I K+ +LE T + + Sbjct: 70 RDSLLRD-------QFNSNINVHEKISKNDSITSIIEKVFNSNIKSLEDTKKIAEKKSFS 122 Query: 127 KIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQ 186 ++++++ + G+GGS+++ D K ++ + ++D H+Q + L K D Sbjct: 123 TALKILTQVDIVHFFGVGGSSVIAHDAYHKFLRSPLKCRFDSDFHLQLMQASLLTKNDCA 182 Query: 187 IAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMS 246 IS+SG KE + A+ A+++ A +I +TS S L + A T + + E E+RS ++S Sbjct: 183 FIISHSGMTKESIEIADIAKERKAKIIVLTSYPLSILAKKADITFISTAEEIEYRSEALS 242 Query: 247 TRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +R AQ S+ D +F+ ++ N ++ + + + K Sbjct: 243 SRIAQLSILDTIFILVMLNNPTKTQISLNKIRTTIAKTK 281 >UniRef50_C2D9G3 RpiR family transcriptional regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9G3_9ACTN Length = 285 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 85/285 (29%), Positives = 139/285 (48%), Gaps = 8/285 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 KI + E EQ IA F+ +V E ++ ++A +LG++ S+I KFAQK+G + Sbjct: 5 SVTAKIKSLLPSCAEKEQAIAQFILQHVRETSYMTIHELADKLGVADSTIFKFAQKMGYK 64 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF + R L+ E + +H IT+ DSL IA + +L T ALL+ Sbjct: 65 GFRDFRNDLLTE-------AYDPEVSVHEHITTRDSLATIAATIFHSSVTSLHNTLALLN 117 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L++ + +I+ A + G GGS +V D K ++ D H+Q + L Sbjct: 118 EDNLKRALSLINNAHTLTFFGCGGSNIVAADAYHKFLRSPLHCQNAIDEHIQIMQASLLG 177 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV I IS+SG + + AE R+ +I ITS ++P+ R A + S ET +R Sbjct: 178 AQDVAIIISHSGLSRTTLQIAEILRENRVPIIFITSYLNTPITRFADVVFISASEETGYR 237 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESL-KMIQRSSELTQRLK 285 S S+++R AQ + D LF ++ +D +++ + + R K Sbjct: 238 SESLASRVAQLVILDTLFCAVMFKSDDKNVAQTLHNIRSAINRTK 282 >UniRef50_D1AG49 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AG49_SEBTE Length = 283 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 70/285 (24%), Positives = 143/285 (50%), Gaps = 3/285 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M + K+ A FT NE A ++ ++ E+ +S ++AK+ S ++I++ +K+G Sbjct: 1 MSLIIKLREAK-NFTPNEIGAAKYIISHSDEVIRLSCTELAKKTYTSPATIIRLCKKIGI 59 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 G+ E ++ L E + + N+ ++ ++ I DS+ I K++ +L++T L Sbjct: 60 GGYQEFKVILATEINFFIK--NSMEINKNNEIDKKDSISDIIDKISSLSIDSLKETKILT 117 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D ++ +I++I+ A + + G G S V D ++K M+IG A A Q ++ Sbjct: 118 DKNVVKSVIDMINNAEILDLYGSGASHFVALDANYKFMRIGKVTATYALYDQQYVQAKNS 177 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + I SYSG E++ A+ + A +I IT +D+ L + A +L + E + Sbjct: 178 NENHAAIIFSYSGETAEMIEIAKILTENKAKIITITKNSDNTLEKFADKSLYVTAKENLY 237 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 RS+++ +R + +V D+L+ L ++L+ + ++ +K Sbjct: 238 RSAAIYSRISMLNVIDILYTAYFNLIYEKALEALGKTRISKTEVK 282 >UniRef50_C3JIB3 RpiR-family transcriptional regulator n=2 Tax=Rhodococcus erythropolis RepID=C3JIB3_RHOER Length = 291 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 78/284 (27%), Positives = 140/284 (49%), Gaps = 5/284 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L +I + S + E +IA+ ++A+ S +++ +A++ S +++V+ A++LG + Sbjct: 12 DLLARIRASLSSLSPAELRIAEIIEADPSLASTLTVNDLAERASTSTATVVRTAKRLGFE 71 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ +LR+AL + E T + L I + DS + KL + L+ T L D Sbjct: 72 GYPQLRLALAAISGSGTENT----IPLGVDIVAADSAGEVMAKLAEFESEQLKGTAQLTD 127 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 A L++++ I A +++ G+G S +V +DL+ KL +I D + L Sbjct: 128 PAALEEVVSRIRSARRVEVYGIGASGIVAQDLTLKLSRIDVNCRVHLDRDAAMVSASLLG 187 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 D+ + IS+SG ++V AR+ GA+ AIT S L +H L T E +R Sbjct: 188 PDDIAVGISHSGETSDVVEPLALARRTGASTAAITGGARSTLAVQSHHVLLTAGREFGFR 247 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S++M++RT Q V D +F + +L +QRS + + Sbjct: 248 SAAMASRTGQLLVVDTIFAMVAHSL-PSALSALQRSHDAIASKR 290 >UniRef50_Q9WYG1 Uncharacterized HTH-type transcriptional regulator TM_0326 n=7 Tax=Thermotogaceae RepID=Y326_THEMA Length = 280 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 71/286 (24%), Positives = 134/286 (46%), Gaps = 8/286 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGI-SQSSIVKFAQKLG 59 M + +I EFT E+KIAD + ++ + S ++++ G+ S++S+VKF +KLG Sbjct: 1 MDVIQRIKEKYDEFTNAEKKIADTILSDPKGIIESSISDLSEKAGVKSEASVVKFYKKLG 60 Query: 60 AQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCAL 119 F + ++ L S A ++ ++S+D + I K+ + A+ T Sbjct: 61 LNSFQQFKVLLAQSISR------APLEIVYEDVSSEDDTKTITEKIFKATVRAILDTLNW 114 Query: 120 LDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQA 179 LD +++ +++ A I G SA V D K +IG D H+ A + Sbjct: 115 LDIDSIERTVDLFKNAQRIIFIGFAASAAVAFDAFHKFTRIGKNCLFSNDEHIIAAILAT 174 Query: 180 LKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETE 239 D+ +AIS++G +V A+ A++ V+ IT S L + + L T + ET+ Sbjct: 175 ASPSDLLVAISHTGETISVVNFAKKAKEMKMPVVTITGNRKSTLAKYSDVVLATNTKETK 234 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 R+ +M++R Q + D ++ L + +++ + +S LK Sbjct: 235 IRTDAMTSRIVQLVILDTIYTLLAARD-PRAIENLNKSRLAVSELK 279 >UniRef50_A8SDH7 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDH7_9FIRM Length = 281 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 127/281 (45%), Gaps = 7/281 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + + + T++ + +A++L + +E Q +S +A++ ++++++ +F + LG + Sbjct: 4 NFWELLQQHQGDLTKSGRTVAEYLVQHAAEAQYLSISSLARECQVAEATVFRFCRALGFE 63 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ E+R+AL + L D + + A+ T L Sbjct: 64 GYHEMRIALAQANATG-------VLVNQQEPAPDADTATLCEHASALFMTAINGTQNALS 116 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + + + ++ A + G GGS +++ + I + AD+H+Q + + Sbjct: 117 PQAVDQAVALLHSARQVFCMGQGGSMAAAKEICARFACITNKFRAVADSHMQVMAASLMT 176 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 + DV + +SYSG+ ++++ A+ GA +I IT DSP +LA L + E+ Sbjct: 177 EQDVVLFVSYSGATRDLMETLRTAKANGAKIILITHYEDSPGAKLADIVLLCGAQESPLD 236 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 S S+ + A V ++L + + + S + +R++E Sbjct: 237 SGSIPIKVAVLYVAEVLVLRYILDDKPGSTEAQERTTEALA 277 >UniRef50_D2PUN7 Transcriptional regulator, RpiR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PUN7_9ACTO Length = 294 Score = 250 bits (639), Expect = 4e-65, Method: Composition-based stats. Identities = 77/268 (28%), Positives = 125/268 (46%), Gaps = 2/268 (0%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 T+I T EQ++A+ + A+ + Q+A++ S +++ +F + LG G Sbjct: 4 IETRIRGLVPTLTPAEQRVAEQVLADPLGTHRGTIGQLAERSRTSLTTVTRFCRALGMAG 63 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 + ELR AL E A + L + I DD ++ + L AL++T + LD Sbjct: 64 YQELRFALATE--AGEASSRDWTLGAAADIGPDDPMQSVLANLVATDVRALQETASQLDL 121 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 A +++++ I+ A + + + GSA V DL +L ++G D H + L Sbjct: 122 AVAEQLVDAITTARRVDLYAVSGSAAVTNDLQRRLHQLGITCHLWIDVHDALASATLLGP 181 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 DV I IS+SG E++ AAR GA A+T+ S + +A L T + E +RS Sbjct: 182 EDVAIGISHSGETIEVIEPLTAARDAGAVTAAVTNFPRSAITSVAGLLLTTSAREATYRS 241 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVES 270 S+S R Q V D L G+ Q S Sbjct: 242 GSLSGRHTQLLVIDCLVTGVAQRTSPAS 269 >UniRef50_C8NHI8 Probable transcriptional regulator YbbH n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHI8_9LACT Length = 281 Score = 250 bits (639), Expect = 4e-65, Method: Composition-based stats. Identities = 75/284 (26%), Positives = 142/284 (50%), Gaps = 6/284 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L KI ++ S FTE ++ IA+F+ N + +++++ S ++ V+F++K+G Sbjct: 1 MSVLYKIKSSMSAFTETDRSIAEFVFVNRQVVLESNAKELGDMTKTSAAAWVRFSKKMGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +G ++AL E + + + + + DSL + +K + +T +LL Sbjct: 61 KGLPAFKVALAKETQSYTNE-----DDIETFLNPQDSLMGLLQKTENMLTQNIRETFSLL 115 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 DY L+K IE I +A + + G+GGS++V D K+ +I V + D H L Sbjct: 116 DYHALEKAIEFIHEAKTVFLLGVGGSSIVCLDFYHKMTRIHQNVMYDRDLHTLMPRIAQL 175 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLT-DSPLRRLAHFTLDTVSGETE 239 K DV + ISY+G + + A+ A+ GA ++ +T S L L+ L E E Sbjct: 176 DKNDVVLVISYNGETESVNSIAKVAKTMGARIVGVTKYNLKSTLSTLSDIRLFVPVEEKE 235 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 R S+++R + ++TDLL+ G+ + + + ++ R+ + + Sbjct: 236 IRLGSITSRNSLLTITDLLYYGIAKTDFNVTKDLLVRTRQFIKE 279 >UniRef50_A1JQZ2 RpiR family regulatory protein n=12 Tax=Enterobacteriaceae RepID=A1JQZ2_YERE8 Length = 286 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 115/284 (40%), Positives = 180/284 (63%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L +I+ E EN++KIA + N + S+SS Q A+ G+SQS+IVKF+QK+G Sbjct: 1 MSILNEITWLLPELAENQKKIAKCILDNPESILSISSSQFAEDAGVSQSAIVKFSQKIGM 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF L++A+ E S + + LH+SI+ +DSL V+A+KL EK ++ +T + Sbjct: 61 KGFPALKIAISEELSRNNLFKSYPHKALHNSISPEDSLMVMAQKLAHEKTASIMETTRKI 120 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 +++ Q+++ +I+ A +QI G+ G+ L +DLS+KL KIG EAD HVQ + L Sbjct: 121 NFSVFQQVVSLINAAQRVQIVGIWGAGLTAKDLSYKLQKIGIMTLVEADLHVQIAAALTL 180 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 DVQI +S++G +K++ + A A+ QGATVIAIT SPL ++A + L+++S E EW Sbjct: 181 TPKDVQIVLSFTGRRKDMKIAATVAKAQGATVIAITGSKVSPLAKIADYVLESISDENEW 240 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 RSSS+S+RTAQN++TDL+F+ L+Q + +I +S L Sbjct: 241 RSSSISSRTAQNTLTDLIFLALMQQRKEMAKPLILNASMTINNL 284 >UniRef50_Q13K65 Transcriptional regulator, RpiR family n=7 Tax=Burkholderia RepID=Q13K65_BURXL Length = 287 Score = 249 bits (637), Expect = 8e-65, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 126/278 (45%), Gaps = 9/278 (3%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + I +A + E+K+AD + ++V S ++A++ +S+ S+ +F + +GA Sbjct: 5 NLIPHIRSALANLRPAERKVADMVLSDVDFAMRASITELAQRAEVSEPSVTRFCRAIGAH 64 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G + +M L + + +++ DD ++ + K+ + LD Sbjct: 65 GLRDFKMQLAQSVAGG-------VPYASTAVARDDDVQTLMDKVGEAAIGGITHARGALD 117 Query: 122 YARLQKIIEVISKAPFIQITGLGG-SALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 A ++ I +S A + G+G S LV +D + + +++ D H+Q + + Sbjct: 118 PAVVESAIAALSSARRVFFFGVGSGSGLVAQDAALRFLRLDIASTAFTDGHLQRLYAGLM 177 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + GDV AIS+SG E+ + A+++GAT IA+T++ S L L L Sbjct: 178 EPGDVAFAISHSGRSVEVNESIQIAKERGATTIALTNVG-SRLAWLVDIPLLLRVPSPID 236 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSS 278 ++ +R + D L +G+ ++L+ ++ + Sbjct: 237 PNTPGVSRLVHLCIMDALAIGVALKAGPKTLEKMRHAK 274 >UniRef50_A5EB66 Transcriptional regulator, RpiR family n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EB66_BRASB Length = 270 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 72/276 (26%), Positives = 128/276 (46%), Gaps = 7/276 (2%) Query: 10 AGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMA 69 E ++IA+ + A S ++A+ +S+ +IV F +++G +GF EL++ Sbjct: 1 MLPELPPKARQIAELIAAQPEPFVHKSITEVAEACDVSEGTIVSFCRRVGVRGFQELKIM 60 Query: 70 LIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKII 129 L + + + D + + +L++T LL L + Sbjct: 61 LARDLIE-------PVRLIQEDLHRGDDPATVTDHIFAAHAASLQETRRLLSMEALAEAT 113 Query: 130 EVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAI 189 ++ +A I+I G+G SA + +DLS++L+++G D+HVQA + G + + Sbjct: 114 RLLREAQRIEIYGIGSSAPIAQDLSYRLLQLGLAANAIVDSHVQAVSAGMTGPGVATVTV 173 Query: 190 SYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRT 249 S+SGS E VL A+ GA I IT L SPL L TV+ ET +R +MS+R Sbjct: 174 SHSGSTVETVLATRLAQAAGARTIGITRLGKSPLAAHCEVLLYTVANETRYRPEAMSSRV 233 Query: 250 AQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 AQ ++ D L + S+ +Q ++ + + Sbjct: 234 AQLAIIDTLVSCCALTDTERSVGRLQHAARILSEKR 269 >UniRef50_A9NEV7 Transcriptional regulator, RpiR family n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NEV7_ACHLI Length = 281 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 76/285 (26%), Positives = 136/285 (47%), Gaps = 5/285 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M + + + E+ + D+L N + L+ S ++A+ S +S+V+ +KLG Sbjct: 1 MSVMLNMLKNKEALSMAERIVLDYLIENKTLLKDFSVEKIAEAAYTSPASVVRMCKKLGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF + ++ I + S+ + T+ + + D + +K ALE+T L Sbjct: 61 NGFKDFKIDFI--LANSKVEIPETSEYTDVILIKDQNNG---KKAIENNIRALEETINLY 115 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D K +I A I I G G S LV +DL KL +I + ++H Q + + Sbjct: 116 DEKTYTKAASLIMNARKILIFGKGSSFLVCKDLEMKLRRINKFCVAQGESHDQFVDASFI 175 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 DV I IS SG KEI+ A A++ +I+IT + S L ++ L T + E+E+ Sbjct: 176 NNKDVVIFISNSGKTKEIISSALLAKENKTPIISITRIGSSILADISDVVLYTSALESEF 235 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 RS++M++R +Q SV D L+ + S++ ++ + ++ K Sbjct: 236 RSAAMTSRISQMSVVDALYAKCAYTDIDRSIQALETTYRTIKKFK 280 >UniRef50_C2JLW7 Bifunctional RpiR family transcriptional regulator/sugar isomerase n=22 Tax=Enterococcus faecalis RepID=C2JLW7_ENTFA Length = 290 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 80/285 (28%), Positives = 150/285 (52%), Gaps = 8/285 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + I + + ++E+KIA+++ N + S++++++AKQ G S ++I++F + Sbjct: 12 NIVLSIQDRLQQLPKSERKIAEYILKNTETVISMNAQELAKQAGSSPAAIIRFCHSMDVN 71 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GFTEL++ L +++ +++ +T +S I +KL +E++ L+ Sbjct: 72 GFTELKLLLSANLGQMKQQ-------MYTEVTKGESTADIKQKLQARFVHVVERSGQTLE 124 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + + ++++ K I + GLG S+LV +D+ K ++G V D H+ A++ + + Sbjct: 125 DVAVNEAVDLLEKTEVIFVYGLGASSLVAQDIYQKFTRLGRTVFTTLDHHLFASMLGSTE 184 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGET-EW 240 K V I IS SG+ KE A+ A++QG +++IT S + + L T SGE Sbjct: 185 KPSVFIVISNSGTNKEASTLADLAKQQGIPIVSITQDEKSVIGEKSDIVLQTSSGEDVPL 244 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 RS++ + AQ V D+LF N E+L+ IQ S + +RLK Sbjct: 245 RSAATVSLVAQLYVVDVLFFAYAAKNYKETLEKIQISRKNVERLK 289 >UniRef50_Q7MD38 Transcriptional regulator n=31 Tax=Gammaproteobacteria RepID=Q7MD38_VIBVY Length = 278 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 67/280 (23%), Positives = 138/280 (49%), Gaps = 13/280 (4%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L ++ + F++ + +AD++ N ++Q + +A+ S++++V+ + +G + Sbjct: 6 NLLVRLRSNMEPFSKKLRVVADYILENAHDVQFQTITDLARNTQTSEATVVRLCRDMGYK 65 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+++ RMAL + S + + I + +L+ T L+D Sbjct: 66 GYSDFRMALAVDLSQTESRQQNHIE------------GDICDVSAQSAVDSLQDTAKLID 113 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L +I+E + +A FI G+G S++VGR L+++L++IG + DTH+ A + Sbjct: 114 RKSLARIVERVHQAEFIGCIGVGASSIVGRYLAYRLIRIGKKAIMFEDTHLAAMSASRSS 173 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 +GD+ A+S SGS KE++ A A K+ V+++T++ SPL L+ L E Sbjct: 174 QGDLWFAVSSSGSTKEVIHAAGLAYKRDIPVVSLTNINHSPLSSLSTEMLVAARPEGPLT 233 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 + +++ + D+L L++ E +Q ++E+ Sbjct: 234 GGAFASKVGALLLVDVLVNSLLES-YPEYKDSVQETAEVV 272 >UniRef50_A9BH25 Transcriptional regulator, RpiR family n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BH25_PETMO Length = 283 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 69/281 (24%), Positives = 138/281 (49%), Gaps = 6/281 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQA-NVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 +++ FT++E+K+A+++ ++ ++ ++A + G S+++I +F +K G Sbjct: 3 KIQAFLNSRMPTFTKSEKKVAEYILNSKKEDITRITITELATKCGTSEATIARFVKKAGF 62 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 + F + ++ L + + +I +DS + I RK+ ++E T ++L Sbjct: 63 ETFQDFKLTLALD-----NNEDIFEEEKDITIFKNDSPQEILRKVKLGSLKSIESTTSIL 117 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D + I A I+I G+G S+ V + L +KL ++G+ D H+QA + L Sbjct: 118 DINNFLQAANFIRSAKRIEIYGVGSSSAVAKILQYKLTRLGFPSYALEDPHMQAISAATL 177 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 GD+ I IS SGS K+ V A+K GAT I++T +SP+ + + L+ SGE Sbjct: 178 NFGDLAIGISQSGSTKDTVDSLNVAKKHGATTISLTEHANSPITKYSDVVLEIFSGENPV 237 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 ++S+ + Q ++L L + ++L + ++ Sbjct: 238 KTSAGRSILVQIFAVEILSGLLYSIEYEKALTTGKDTARAV 278 >UniRef50_C4L7F8 Transcriptional regulator, RpiR family n=2 Tax=Gammaproteobacteria RepID=C4L7F8_TOLAT Length = 292 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 78/280 (27%), Positives = 141/280 (50%), Gaps = 7/280 (2%) Query: 5 TKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFT 64 KI A + E++IA++L A + S + +A+QL +S+ IVK ++KLG GF Sbjct: 13 AKIRMALPGLSNTERQIAEWLLAKGNVESKTSIKSVAEQLEVSEPLIVKLSKKLGFAGFR 72 Query: 65 ELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYAR 124 ELR AL+ S+ + I DS+E + K+ A+++ ++ D Sbjct: 73 ELRQALVEYLSS-------LPIDSEQEIEPTDSVESVLNKVFANSIQAMKEARSVADPIL 125 Query: 125 LQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD 184 + ++I A + I G+GGSA V +D KL++IG +D H+ VS L + D Sbjct: 126 IANAAQLIFNAKNVVIFGVGGSAAVCQDFEHKLLRIGILSRAYSDFHMMLMVSSQLDEND 185 Query: 185 VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSS 244 V + IS SG +E++ E A+++ + VI IT+ S L +LA + + + + + Sbjct: 186 VIVVISQSGDTRELLKAVENAKQRHSRVICITNNDTSALAQLADYAIFSPAKGGILLGQN 245 Query: 245 MSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 R Q ++ D+LF+ ++ + ++ + + R S + + L Sbjct: 246 AVARIVQLNLLDVLFIAILLQDHDKNREKLTRGSRVVRHL 285 >UniRef50_B7GUA9 Transcriptional regulator, RpiR family n=7 Tax=Bifidobacterium RepID=B7GUA9_BIFLI Length = 289 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 65/281 (23%), Positives = 125/281 (44%), Gaps = 3/281 (1%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 +I + E+ +A +++ ++ E ++ QMA +SQ ++++FA+KLG G Sbjct: 7 IRERIDHVYPSLRPAERAVAQYIRDHIEEAADLTVGQMADIAHVSQPTVIRFARKLGFGG 66 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 + ELR L + + N + D + I K + +++ + LD Sbjct: 67 YRELRYVLRHPAAEHKVTFNPLD---GFDLNPWDGEDEIPSKAADGAKALIDELHSALDP 123 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 +K + +++++ FI I G+ S DL KL +G D ++Q + L Sbjct: 124 KAYRKAVALLAESEFIDIFGVENSLTPAMDLFTKLGYLGLTCRLNTDAYLQQIGAGHLTH 183 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 G V +A S+SGS + V A+ GA IAIT+ +PL A TL T Sbjct: 184 GAVAVAFSHSGSSADTVKALRLAKSHGAKTIAITNAIGAPLASWADVTLLTGRDSHTIYG 243 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 +++ + A ++ D+L++G++ + + S + + Sbjct: 244 NAIFSCVADTALVDMLYMGVILSDYGRFSTALDESGRMIRD 284 >UniRef50_A6T0F7 Transcriptional regulator, RpiR family n=2 Tax=Oxalobacteraceae RepID=A6T0F7_JANMA Length = 286 Score = 246 bits (629), Expect = 6e-64, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 122/283 (43%), Gaps = 8/283 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + L I +++E+K+A + + + +AK+ +S+ ++V+F + +G Sbjct: 1 MLLDSIRTQYDSLSKSEKKVALAVLEQPELAIAENITALAKKAEVSEPTVVRFCRAIGFD 60 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ ++ L + + + + + +D + K+ L LD Sbjct: 61 GWQAFKLKLAQGLALAPGTGDESPML-------EDMAADLVDKVCNRSINTLLDLRNSLD 113 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 +++ ++V+ +A I+ G G S ++ D K + G +D H+ + + LK Sbjct: 114 ANAIEQALQVLGRANTIEFYGQGTSGIIAADAQHKFFRSGVPTVAYSDPHIHSIAASLLK 173 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 KGDV +AIS GS ++ + AR GA ++ + + + +PL LA + Sbjct: 174 KGDVVVAISQRGSSLSLLRSVQLARSSGAAIVVL-APSGTPLAELATVLIPIDLHFHTDP 232 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 + +S R A V D+L VGL E K + + + Q+ Sbjct: 233 YTPISARLAHLVVIDILAVGLALRLSPERRKKMLNAQKALQKF 275 >UniRef50_B5HLI6 RpiR-family transcriptional regulator n=3 Tax=Streptomyces RepID=B5HLI6_9ACTO Length = 317 Score = 246 bits (629), Expect = 7e-64, Method: Composition-based stats. Identities = 79/282 (28%), Positives = 145/282 (51%), Gaps = 4/282 (1%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 K+ G T + ++A+ + A+ + +++ +A++ G S++++V+ A+ LG G Sbjct: 35 LAAKVRTLGPSMTRSMHRVAEAVAADPAGCAALTVTGLAERTGTSEATVVRTARLLGYPG 94 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 + + + + ++ + A + + I DD + + KL +++ L T A LD Sbjct: 95 YRD---LRLALAGLAAQQQSGRAPAITTDIAVDDPIADVVAKLAYDEQQTLADTAAGLDT 151 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 A+L + + A I + G+G S LV +DL+ KL++IG +D H+ T + L+ Sbjct: 152 AQLGAAVAATASARRIDVYGVGASGLVAQDLTQKLLRIGLIAQAHSDPHLAVTNAVQLRS 211 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVS-GETEWR 241 GDV IAI++SG+ +++ A + GAT +AIT D + + A L T + E+E R Sbjct: 212 GDVAIAITHSGATGDVIEPLRVAFEHGATTVAITGRPDGAVTQYADHVLTTSTARESELR 271 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 ++MS+RT+Q V D LFVG+ Q + + S E Sbjct: 272 PAAMSSRTSQLLVVDCLFVGVAQRTYETAAPALAASYEALAH 313 >UniRef50_Q03Q61 Transcriptional regulator n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03Q61_LACBA Length = 286 Score = 246 bits (629), Expect = 7e-64, Method: Composition-based stats. Identities = 63/284 (22%), Positives = 123/284 (43%), Gaps = 4/284 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + KI + + E+K+A + + ++ +++A G+S ++I +F +++ Sbjct: 4 STIGKIRGTYDQLSRTEKKVAQMALNTPAVVSEMTIKELASATGVSTATISRFVKRMDYA 63 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 + E MAL + + DSL IA K +LE T L Sbjct: 64 NYREFTMALAH----LAIEDGGEHQSSFPELAEGDSLATIANKTFHYTISSLEATNEALS 119 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L + + + A + GLGGS++ D K ++ V D +Q + L Sbjct: 120 EKDLARAVLKLINAEKVTFFGLGGSSIAALDGYHKFLRTALSVTYYPDFDIQLMQAARLS 179 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 D + IS+SG E + E ++ ++IAITS + SPL + A T +++ E +R Sbjct: 180 DQDCAVVISHSGRNSETLQVVEELQRNDVSIIAITSYSGSPLAQAADVTFLSLTDEVNYR 239 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S M + +Q ++ D LF+ V + ++ + ++ ++ + Sbjct: 240 SEGMYSLISQLAILDTLFMMTVLRVSSRTGNVMTKVHDVIEQTR 283 >UniRef50_B9CM70 Transcriptional regulator, RpiR family n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CM70_9ACTN Length = 283 Score = 246 bits (629), Expect = 7e-64, Method: Composition-based stats. Identities = 74/284 (26%), Positives = 140/284 (49%), Gaps = 7/284 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 ++ S ++ E+++A+FL A+ + ++ Q+A+ LG++ S++ KF QKLG + Sbjct: 5 TIRVRVRALESSLSDKERQLAEFLLADPHKASKMTISQIAQTLGMADSTVFKFTQKLGFE 64 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF + R L E + +H IT + + +A + +L T L Sbjct: 65 GFRDFRGELAAE-------GFDPEVSIHEHITHKSTPKQMAETVFESSIRSLTDTKELFS 117 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + ++I + G+GGS++V D K ++ RVA +AD H+Q + Sbjct: 118 EQDIIHAAKLIEDCYQLTFYGMGGSSVVAADAYHKFLRTPKRVAYDADFHLQLMRASRSN 177 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 D + +S+SG + + AE R+ GA+ I ITS SPL LA L T++ ET +R Sbjct: 178 GDDCALLVSHSGRCIQTIQIAEKLREVGASTIVITSNPSSPLTALADACLVTIAEETAYR 237 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S S+++R +Q ++ D L+ ++ ++ + + ++ E+ + Sbjct: 238 SESLASRISQLALVDALYTIVMFSDENAASRSLKEVREVISATR 281 >UniRef50_A8UCF6 Phosphosugar-binding transcriptional regulator, RpiR family protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UCF6_9LACT Length = 292 Score = 246 bits (629), Expect = 8e-64, Method: Composition-based stats. Identities = 65/285 (22%), Positives = 134/285 (47%), Gaps = 3/285 (1%) Query: 2 LYLTKI-SNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 YL K+ F + E+ IAD ++ + + +A G+S+++I KF +K+G Sbjct: 4 NYLEKLLRPYIKSFNDTEKIIADHFIKLGHDVVNKTLSNLADDTGLSEATIFKFVKKIGF 63 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF ++++ + E+ N + S I+ +DS IA+KL +LAL+ L Sbjct: 64 DGFPNFKISVASNFQNIEERKNELTVF--SDISKEDSSYAIAQKLVYSNKLALDNLIGSL 121 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D R+ + + +I + I G G S+++ D K ++ + +D H+Q + + L Sbjct: 122 DEERINQALNLIYDSQTIHFFGQGASSVIALDSYHKFLRTRFLCNYISDYHMQLSYATKL 181 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 D S+SG E + A R +I +T + L +L+ + S E+ + Sbjct: 182 GPNDCVFLFSHSGETNETIEVARILRNNQVNIIVLTGNHHTDLVKLSSISFVVDSEESAF 241 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +S ++++R ++ D+L+V L+ ++ ++ +++ + K Sbjct: 242 QSETLTSRILYLTIIDILYVALMYHDEAKNKDSLEKIRKALAVTK 286 >UniRef50_C1PED1 Transcriptional regulator, RpiR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PED1_BACCO Length = 289 Score = 246 bits (628), Expect = 8e-64, Method: Composition-based stats. Identities = 68/284 (23%), Positives = 143/284 (50%), Gaps = 7/284 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + +I + + +++E+K+ +++ ++ E + ++ ++AK+ G+S +++V+F + +G Sbjct: 6 NIILQIKSKLTSLSKSEKKLGEYILSHAVETVNDNTSELAKKAGVSPATVVRFCRSIGLS 65 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF++L++ L + S ++ +++ IT ++ + +IA KL ++ QT LL+ Sbjct: 66 GFSQLKIRLYADASGGLDRE------IYTDITPNEDITMIADKLALRFNQSITQTANLLE 119 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + ++KI ++ K+P I + G+G S + D + K +IG V D H+ + Sbjct: 120 TSCIEKITAMVDKSPAIYVYGIGASHVAAEDFTHKFSRIGKPVVHTLDHHLLGSSLINAS 179 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGE-TEW 240 K + +AIS SG E + + A++ G + IT DS L + L GE Sbjct: 180 KDCMFVAISNSGETNEAIKLTQIAKQNGLFTVGITQKRDSTLASIVDAPLIHHGGEAVLL 239 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 RS++ ++ AQ D+L+ V + E + ++ S Q Sbjct: 240 RSAATTSLAAQLFTIDVLYFAYVAKHYHEIMGRLKNSKINIQTF 283 >UniRef50_Q2JBJ8 Transcriptional regulator, RpiR family n=1 Tax=Frankia sp. CcI3 RepID=Q2JBJ8_FRASC Length = 299 Score = 246 bits (628), Expect = 9e-64, Method: Composition-based stats. Identities = 81/282 (28%), Positives = 136/282 (48%), Gaps = 7/282 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 + + T + +KI + + E+ ++ +A + G S +++V+F Q LG +GF Sbjct: 24 IAHLRACLPTLTPSGRKIGQLILDDPREIVHLTVTDLADRTGTSVATVVRFCQDLGLKGF 83 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 +L++ L GE LH ++T DS I K+ E AL +T +D A Sbjct: 84 ADLKIRLAGE-------AIPPERGLHEAVTHADSPATILEKILHSTESALSETTRTVDRA 136 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 + ++ + A + + G G SA + +D +++ +G AD HVQ ++ L Sbjct: 137 AFTRAVDALQCADRVLLIGAGTSAPLAQDAAYRFRTLGLLAEAPADAHVQHVAARLLPPA 196 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 +AIS++G +E + A AAR GAT IA+TS SPL RLA L S ET +R Sbjct: 197 SACLAISHTGQTRETLAGAAAARAAGATTIALTSFFRSPLTRLADVALVAGSSETNYRVE 256 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +MS+R +V D LFV + + K + ++E+ + Sbjct: 257 AMSSRIIHATVLDALFVAVHLAQPDRAQKAQELTAEVLTEHR 298 >UniRef50_C6JFM8 Transcriptional regulator n=2 Tax=Clostridiales RepID=C6JFM8_9FIRM Length = 285 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 64/281 (22%), Positives = 122/281 (43%), Gaps = 3/281 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L I+ T++ +K+AD++ ++ +E Q +S +A+ +S+++I +F + LG Sbjct: 4 SILDSITEQYHSLTKSGKKLADYVFSHTTETQYLSITSLAENCKVSEATITRFCRGLGLS 63 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ ++AL A R + + ++S+DS+ I K++ L+L ++ AL D Sbjct: 64 GYNAFKLALAQ---ADRTTDLGDSSNSAEPVSSEDSISTICAKVHAANLLSLNESYALYD 120 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + K I ++S + I G GGS ++ + + D+H+QA+ Sbjct: 121 EEEMSKAISILSSSRRIYCFGQGGSMIMAMEAWARFSTASPNFVHICDSHMQASAIAMAD 180 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 D + SYSGS +++ + A + VI IT S A L E+ + Sbjct: 181 SKDAILFFSYSGSTRDMCDTLQIASSRHVPVILITHFPKSAGAEFASVVLQCGYNESPLQ 240 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 S S++ + Q + D LF G ++ Sbjct: 241 SGSVAAKVGQLFLIDCLFYGYCSQKPDTCSAARSATAHAIA 281 >UniRef50_C5BVH6 Transcriptional regulator, RpiR family n=2 Tax=Actinomycetales RepID=C5BVH6_BEUC1 Length = 299 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 80/283 (28%), Positives = 141/283 (49%), Gaps = 2/283 (0%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 LT++ +E++IA+ + + + + Q+A + G S++S+ +F + +G G Sbjct: 16 VLTRLPGLLPTLRSSERRIAEAILDDPQAVSRDTIEQLAARCGTSKTSVTRFCRTIGLAG 75 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 +TELR+AL G+ R++ + L SS + +V+ +L AL +T LD Sbjct: 76 YTELRLALAGDVGRRRDE--SWRAELGSSADPQNPADVVVDELLTANVRALTETVRTLDR 133 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 A L ++ ++ A I + G+GGS V DL + +IG +++H T + L Sbjct: 134 AALAASVDALASAGRIDLYGIGGSGTVAADLQRRFHRIGRVAHAWSESHDALTGAAMLGA 193 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 DV IA+S++G E+ AR +GAT IA+T+ S + A L T + E R+ Sbjct: 194 SDVAIALSHTGETSEVAAALALARDRGATTIAVTNYPGSAVAAAADLVLVTAAHEERARA 253 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 ++ R AQ V D L+V + + ES ++R+SE + + Sbjct: 254 DGLAGRHAQMFVVDCLYVLVAGVLHDESQSGLRRTSEAVRSTR 296 >UniRef50_C9L6X6 Transcriptional regulator, RpiR family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L6X6_RUMHA Length = 297 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 83/270 (30%), Positives = 138/270 (51%), Gaps = 7/270 (2%) Query: 16 ENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYS 75 + E+KIA +L N + + ++A ++G+S +SIV+F + +G GF E ++ Sbjct: 34 KTERKIAAYLLGNFDKSLHSTLLELADEIGVSDASIVRFCKSIGYTGFQEYKI------- 86 Query: 76 ASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKA 135 + ++ + S++ DD+ I K+ + ALEQT LD + + K+ +V+ KA Sbjct: 87 NAALQSVPEPRLYNPSLSVDDNPAEICDKIFAIESSALEQTKQELDISVMNKVADVLLKA 146 Query: 136 PFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSK 195 I + G GGSA+ RD KL+KIG R + D +Q + L + DV AIS+SGS Sbjct: 147 RRINLVGTGGSAISARDFQHKLLKIGVRAELQEDKDLQLMSASLLTEEDVLFAISHSGSN 206 Query: 196 KEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVT 255 + E A+K+ A +I +T + + L A + L VS +T + S S S R AQ ++ Sbjct: 207 LHVAETIELAQKRNAKIITLTMKSKNILVEKADYPLYVVSEKTIFESESFSARLAQLAML 266 Query: 256 DLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 D L + N SL+ ++ + T K Sbjct: 267 DCLVALMAFKNFDGSLEAMKATRIATSVNK 296 >UniRef50_Q03YQ8 Transcriptional regulator n=4 Tax=Leuconostocaceae RepID=Q03YQ8_LEUMM Length = 284 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 74/284 (26%), Positives = 139/284 (48%), Gaps = 5/284 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + ++ ++ EQK+ DF+ +VSE + + ++M++ G+S ++I +F +K+G + Sbjct: 4 NIIAQLRAQRKQYNTTEQKLIDFIINHVSEAREANIQEMSELSGVSTATISRFVKKIGLE 63 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 F E ++L S A ++ L I D +A+K+ E AL T + L Sbjct: 64 SFREFSVSLA-----SAATQMAASVDLFGEIADTDDTIAVAQKVFGGAENALAATVSNLT 118 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 +L + + A + G+GGS++V + K ++ V D VQ + L Sbjct: 119 ATQLDEATLALISARRVGFFGIGGSSIVAFNAYHKFLRTPIDVIAHPDYDVQLMQAVKLN 178 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 D + IS+SG K+ +L A+ +Q +IA+TS DSPL +LA L +++ E +R Sbjct: 179 SNDTAVVISHSGRNKDTLLIAKKLHEQHVKIIAVTSFKDSPLAKLADLVLLSLAEEVNFR 238 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S SMS+ AQ ++ D LF + ++ ++ ++ + + Sbjct: 239 SESMSSLIAQLTIIDTLFTLVGSHLSQDTQSVVDTMRDVIEETR 282 >UniRef50_A8RZI5 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RZI5_9CLOT Length = 294 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 57/285 (20%), Positives = 138/285 (48%), Gaps = 5/285 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + I + +F ++ +A+++ N +++ + R +A + +S++++ +F + +G + Sbjct: 13 TIVLDIRSKMQDFNPAQKAVANYILNNFYDMEGMPIRDLAVESEVSEATVSRFVKAMGYE 72 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 + ++ E + S+ + +L ++ +T +D+ I RK+ AL+ T ++D Sbjct: 73 NYRAFQL----EVTKSKAERRKGSLKGYAEVTEEDNAPGICRKIFESNIQALQDTLTVID 128 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 Y L++ ++I++A + I G S + + +L ++G D H QA S + Sbjct: 129 YDALERAADLIARARRLCIFAQGRSKVTANSIRLRLHRLGIEGTLYTDPHEQAIASSLMG 188 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTL-DTVSGETEW 240 DV + IS G + I++ A +G+++I +TS ++PL + A L + E ++ Sbjct: 189 PEDVAVGISTFGRSRSILVSIRRAAARGSSIIGVTSYQNTPLEKEADILLRTVNNDEADF 248 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S Q + D L++ + + + ++ + + + + Q+ K Sbjct: 249 GSEPSCASVTQMVMLDCLYMLVAKRMEGKAEERFKITRDAIQQEK 293 >UniRef50_C0R285 Transcriptional regulator n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0R285_BRAHW Length = 285 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 74/285 (25%), Positives = 150/285 (52%), Gaps = 5/285 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M I + +F++ +KI++++ +N E+ +++ ++K G+S +S+V+FA+ LG Sbjct: 1 MNAYLIIRDKYEDFSKAYKKISNYILSNPKEVIKLTALDISKNCGVSSASVVRFAKDLGF 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +G EL++++ S+ + ++++ I++DD++E + K+ + + E L Sbjct: 61 KGLDELKISIA-----SKNGDDDNKYNINTIISADDNVEELCNKIMLLIKSSNEDFFYQL 115 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D L+K ++I A I + G+G S+L DL KL + + D H+ A L Sbjct: 116 DKEALEKAFKLIRNARNIYMLGIGASSLSAYDLFHKLKRANFNAFFYEDAHLNAEFFNYL 175 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + DV IA SYSG E++ + A + A++IA+T + L ++A + + E Sbjct: 176 TEEDVVIAFSYSGRTNEVIYPVKIASSKKASIIAVTRKKTNNLSKMADVLITVPNNEELT 235 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 R +++++ + V+DLL+ G +Q + + + +S LT+ LK Sbjct: 236 RMGAITSKYSSLIVSDLLYFGAIQKDFENIKENLINTSILTRELK 280 >UniRef50_Q03HR4 Transcriptional regulator, RpiR family n=2 Tax=Pediococcus RepID=Q03HR4_PEDPA Length = 270 Score = 243 bits (621), Expect = 6e-63, Method: Composition-based stats. Identities = 56/285 (19%), Positives = 124/285 (43%), Gaps = 17/285 (5%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M + + + E+KIA + + ++++ ++ ++K+ +S +++ +F +K+G Sbjct: 1 MNIIDVVEQKYPSLSRQERKIALKVVQHPADVKKMNINTLSKKAEVSTATVTRFVKKMGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 F++ ++ L S+IT + + ++ + T + Sbjct: 61 PDFSQFKLGLAE---------------ATSNITENVDNAPLPDQVTDFYNQMITGTWKRI 105 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + L ++ +I AP + I GLG S ++LS +LM++G +D+H S + Sbjct: 106 NQKTLNQVAMLIKNAPRVFIFGLGSSGYNAQELSQRLMRMGINAFAPSDSHTMYISSSIM 165 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 +K D+ I +S SG E+ A++ V++IT+ DSPL ++ + L E Sbjct: 166 QKDDLLIVLSVSGKSNEVNEAVAVAKQHQLKVVSITAFDDSPLAEMSDYQLSVQYSEFVD 225 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + ++++ + D+L L+Q Q++ K Sbjct: 226 NTQFINSQLGVVYIIDILSTMLLQN--ETYKARYQQTVAAILNRK 268 >UniRef50_D0DKU0 Transcriptional regulator n=1 Tax=Lactobacillus crispatus MV-3A-US RepID=D0DKU0_9LACO Length = 284 Score = 242 bits (620), Expect = 7e-63, Method: Composition-based stats. Identities = 66/285 (23%), Positives = 136/285 (47%), Gaps = 5/285 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M +I +E ++ + IAD + N L + +++++ S +S+++F ++L Sbjct: 1 MNVRDRILENYTELKKSSRIIADAVLENPKILLNKNAKEIGNYTNTSAASVIRFCKQLNY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +G + ++ L + + +T DD + + KL E + Sbjct: 61 KGLKDFQIDLAQSTVKQSQLK-----PIDMIVTKDDKADEVMTKLRVSLSQNFEDLSKTI 115 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D LQK + +I K+ + I G+G S+ +DL +KL++ G V D H+ Sbjct: 116 DIKDLQKAVSLIKKSRAVYIAGIGASSFSAKDLFYKLIRSGKTVFYNDDVHIALERIYYS 175 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 DV I SYSG +E++L + A+K ++A+T ++SPL +LA L E+ Sbjct: 176 TPKDVMICFSYSGLTQELLLAVKQAKKNKTPIVAVTRKSESPLSKLADINLKLPDHESLM 235 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 R ++++ AQ ++++L++ + + E + ++ + +L ++LK Sbjct: 236 RVGAINSTFAQMFISNVLYLCSISSDLGEVKQEMEATGKLLEKLK 280 >UniRef50_C7REF2 Transcriptional regulator, RpiR family n=2 Tax=Anaerococcus RepID=C7REF2_ANAPD Length = 279 Score = 242 bits (620), Expect = 7e-63, Method: Composition-based stats. Identities = 87/285 (30%), Positives = 149/285 (52%), Gaps = 6/285 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M Y KI +FT ++ KIA ++ E+ ++S+++A G SQS+I++F QK+G Sbjct: 1 MTYTIKIKERSEDFTPSDTKIAKYILDKPGEVIKINSQKLADLTGTSQSAIIRFVQKIGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +G+T L++ + N I++DD + I K ++E+T AL+ Sbjct: 61 KGYTSLKLDIAKSL------ENDEINLKSEVISADDKVGDIIEKSKINVISSIEKTYALI 114 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D ++ K I+ I A F+ + G+G S LV D +KL + G + E D H ++ + Sbjct: 115 DEDQISKAIDNIVYANFVYLAGIGSSGLVCEDFLYKLQRSGKKAFYETDAHTNLSLLTNI 174 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 K+ D+ I I+Y+ KE+++ AE A+ GA +I+IT L ++ + E + Sbjct: 175 KEDDLLICITYTALSKEVLIAAEYAKTIGAKLISITKAGRGKLANMSDILIPIPEIEKKM 234 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 R ++S+R A +TD+LF G + N E +K + S ELT +LK Sbjct: 235 RYGAISSRFASQIITDILFYGYISKNMDEVVKNLMVSKELTDKLK 279 >UniRef50_Q2SNY6 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SNY6_HAHCH Length = 285 Score = 242 bits (619), Expect = 9e-63, Method: Composition-based stats. Identities = 64/284 (22%), Positives = 131/284 (46%), Gaps = 8/284 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L+ + ++EQK+A+ + N +++ + +A + G+S+ +IV+F + + Sbjct: 6 DILSWLRQNRDTLRKSEQKVAECVLRNPNDVIHMRIVDLATEAGVSEPTIVRFCRTICFD 65 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 F +++L + ++ + +T A S DSL+ + K+ + + +L+Q L Sbjct: 66 SFQSFKVSLAQQLASMQRQTPFRAR-------SGDSLQQLGAKIFSDVQSSLQQVFNQLA 118 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + R+++ IS +P + G G SA V D K ++ D Q ++ ++ Sbjct: 119 WDRIEQACAWISNSPRLYFFGYGASAAVAADAQQKFFRLKPSTHACPDPDTQMLIAGLVE 178 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV IAIS+SG ++ AR GA V+AI S S L +A+ + E Sbjct: 179 TNDVIIAISHSGRTNNLIQSCMQARASGAKVVAI-SPPQSALANIANLNIGVSVDENADA 237 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + +++R A + D + L Q D + ++ + ++ + L+ Sbjct: 238 FTPLASRLAHLMILDTIASNLFQKLDEQHVQKLNQAKKNLSSLR 281 >UniRef50_D1PSB4 Transcriptional regulator n=3 Tax=Clostridiales RepID=D1PSB4_9FIRM Length = 282 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 56/281 (19%), Positives = 123/281 (43%), Gaps = 7/281 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + + + SE T + +++AD+L + E Q +S +A + G+++++I +F + LG Sbjct: 5 NFWELLRSRYSELTRSGRRVADYLTRHAEEAQYLSISSLAAECGVAEATIFRFCRSLGFD 64 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ E++++L + + + + A+ T ++L+ Sbjct: 65 GYNEMKISLAQANA-------IPTAAGADKLEPGADTATLCTHASAVALEAINGTRSVLN 117 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + ++ +A + G GGS ++ D+ + + + D+H+Q + + Sbjct: 118 PEAIDAAATLLQRARQVFCFGQGGSQILANDIWARFATVSTKFRTAGDSHMQTIAASLMV 177 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV + ISYSGS ++++ + GA VI +T D+P LA L + E+ Sbjct: 178 PEDVVLFISYSGSTRDMMETLRIVKGNGAKVILLTHYADAPGTALADVVLLCGAKESPLD 237 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 S++ + A V ++L + N + +R+S+ Sbjct: 238 GGSIAAKIAVLFVAEVLVLRFTLDNQELAAIARERTSKALA 278 >UniRef50_Q6AH41 Transcriptional regulator, RpiR family n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6AH41_LEIXX Length = 289 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 82/286 (28%), Positives = 141/286 (49%), Gaps = 2/286 (0%) Query: 1 ML-YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLG 59 M L+ + A + E +IA + + + ++ ++A SQ+SI +F Q L Sbjct: 1 MSDVLSAVRQAVPRLSATEARIAQTVIEHPQRVVDLTIAELAAVCDASQASIARFCQALR 60 Query: 60 AQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCAL 119 G+ E R+A+ S + L S I DSL+ + K+ ++ LA+E+T Sbjct: 61 YSGYREFRLAVAAATSREQATRERFELT-ESEIDPSDSLQEVVAKIAYQETLAIERTARE 119 Query: 120 LDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQA 179 LD L ++ I A + + G+G S L +DL KL +IG C D+H+ + + Sbjct: 120 LDAEALDAVVAAIIAASRVDLYGIGSSILTAQDLQQKLSRIGLTAFCSVDSHLALSSAAL 179 Query: 180 LKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETE 239 K G+V IA S+SG +E AR GAT +AIT++ +S + ++ L T + E Sbjct: 180 QKPGNVAIAFSHSGETRETNHALAVARAAGATTVAITNVPESSIAAVSDLLLMTQARENF 239 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +RS +M++RTAQ ++ D LFV + Q + ++ + E + + Sbjct: 240 YRSGAMASRTAQLALVDFLFVRVAQRLYDQMTDSLRLTYEAVRSQR 285 >UniRef50_B1QW74 Transcriptional regulator n=2 Tax=Clostridium butyricum RepID=B1QW74_CLOBU Length = 281 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 84/285 (29%), Positives = 148/285 (51%), Gaps = 6/285 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M I + TE+E+KIAD++ N SE+ S+ ++A S SS+V+F++KLG Sbjct: 1 MNCSLLIKQIYDKMTESEKKIADYVLVNSSEVYKFSASELANITKTSSSSVVRFSRKLGF 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF E ++ L + N + I ++D++ + K + ++ T +LL Sbjct: 61 EGFQEFKIELAKD------DINPVENIEYDYIDTEDNIREVIVKTANKNIQSINDTISLL 114 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D +++ I+ I A I I G+G SAL+G DL +KL++I ++HVQ ++S + Sbjct: 115 DEHTIEEAIKAIKNAKNIYIFGIGESALIGLDLQYKLLRIHKNAMISLESHVQLSMSANI 174 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 D+ I ISY G KE+ +++GA I IT ++P+ L + E + Sbjct: 175 SNDDIAIGISYLGKTKEVYSALSKCKEKGAKCITITKFGENPVSSLGDIKIQVPFVEKDL 234 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 R ++S+R Q +V D+LFVGL + N + K ++ + + + L+ Sbjct: 235 RIGAISSRIVQLTVIDILFVGLAKENFSDVEKYLKETRNMIEELR 279 >UniRef50_C6VNS3 Transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VNS3_LACPJ Length = 292 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 66/283 (23%), Positives = 130/283 (45%), Gaps = 5/283 (1%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 LT I + + ++KIAD++ A+ + + S +A +G+S +++ +F +++ Sbjct: 12 VLTLIRSYYPNLSVTDRKIADYIIADPIKTAAQSISDLAAAVGVSTATVSRFVKRISFSS 71 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 F + L + E T + + + IA +L+QT ++ Sbjct: 72 FRDFSREL-----TAAEPIEQTNAEAFQDVEKQTTFKGIAESTFNSIRSSLDQTSQVMTE 126 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 A L++ +E++ A I GLGGSA+ D K ++ G A +D +Q + + Sbjct: 127 ADLKRAVELLLNARSIGFYGLGGSAVAALDGYHKFVRTGIPCAHNSDYDMQLMQAAQMNA 186 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 DV + IS++G ++ + Q VIA+TS +SPL + + +V+ E +RS Sbjct: 187 SDVAVVISHTGRNQQTLQVLATLTSQSVPVIALTSFGNSPLAKDSTVAFISVAEEINYRS 246 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +++ AQ S+ D LF+ ++E + + R E + + Sbjct: 247 EGLTSLIAQMSIIDSLFLMTAVHGNIEMAESLGRVREAISQTR 289 >UniRef50_C0X1P6 Transcriptional regulator RpiR n=21 Tax=Enterococcus RepID=C0X1P6_ENTFA Length = 285 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 67/281 (23%), Positives = 131/281 (46%), Gaps = 15/281 (5%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M Y+ I+ T++E+K+ADF+ + + + + + + ++I++F QKLG Sbjct: 14 MNYIYLINEHYPLLTKSERKVADFILNSGESIIYSTMNDIKTKANVGDATIIRFCQKLGF 73 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF++L++ + E + +++ ++ + + + L+ T L+ Sbjct: 74 SGFSDLKIEIAKEDFSKKKEQPSSGKYHDE--------------VAKSLIEVLQSTSCLI 119 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + +L K I++I++A + I G+G S DL +++G + D H QA V+ L Sbjct: 120 NEEKLTKAIQLINQASSLYIFGVGSSGNTSLDLESMFLRVGIQAKAVLDPHYQAQVASLL 179 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 D+ I S SG K+ + A+ GA ++AIT+ SP+ + A L T E Sbjct: 180 TDRDLVIIFSLSGKTKDTYDSLKIAKNNGAKILAITNYIHSPIGKSADLVLQTAIEE-FL 238 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 S++ + +Q + DLL Q N + SL + ++ Sbjct: 239 NGGSLAGKISQLYICDLLVHEYEQNNKINSLDLREKVLRSI 279 >UniRef50_B0NYS8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0NYS8_9CLOT Length = 282 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 75/281 (26%), Positives = 133/281 (47%), Gaps = 8/281 (2%) Query: 5 TKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFT 64 +I + + E+K+AD+L ++ SE +S ++A SQ++I++F +K+G +GF Sbjct: 9 DQIFSTYDSLYDAEKKVADYLISHPSEAIEMSVSELASHCDASQATIIRFCKKIGCKGFH 68 Query: 65 ELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYAR 124 +L++ L GE E+ + + + D ++ + K ++ T + Sbjct: 69 QLKIKLAGEQRQQEEQVISNEIDI-------DQMDKSLNNIMISKVEEIKATFHNFNPEE 121 Query: 125 LQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD 184 L++I+++I A I+ +G + + D S+K ++G + Q S+ L+KGD Sbjct: 122 LREIVDLIIHANLIEFAAMGDTIPIALDGSYKFNQLGLKAVSSTIWESQEAFSRTLRKGD 181 Query: 185 VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSS 244 V AIS SG+ K +V E + G T IAIT+ + SPL L L T + E + Sbjct: 182 VFFAISASGASKRLVKMVEIVKDNGVTTIAITNQSKSPLAELCDHVLLTATREHIFHDQV 241 Query: 245 MSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 TR A SV D LF+ L S + + + + K Sbjct: 242 SFTRMAAMSVIDTLFLLLFSTKWD-SFENVAQHEQSVAEEK 281 >UniRef50_C5C1Y9 Transcriptional regulator, RpiR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C1Y9_BEUC1 Length = 307 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 72/281 (25%), Positives = 143/281 (50%), Gaps = 2/281 (0%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 L ++ + ++ ++ A+ + A+ + + +A+ G S S++ + ++LG G Sbjct: 17 ILAELRRLLPDLPDSVRRTAERVLADPVASVAGTITDLAEASGTSPSAVSRLCRRLGVDG 76 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 + LR+A++ + +AS ++ + + +I DSLE +A L A+ T A LD Sbjct: 77 YPALRIAVVADATASA--SSPWEIDISRTIGPTDSLEDVAGTLGAATSRAVHDTLAGLDL 134 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 L+ + ++ A + + G+ GSA++ +L +L +IG AD H T + L Sbjct: 135 DVLRDVAHAVAGARRVHLYGVSGSAVMTAELQLRLHRIGIATWSFADVHEGLTGAALLGP 194 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 GDV IA+SY+G E + AA + A +A+T S L +A L TV+ ET +R Sbjct: 195 GDVAIAVSYTGETIETLEMLRAAGSRDALTVAVTGAPRSSLAAVADRILVTVTEETTFRE 254 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 ++ R ++ +V +LL++ + QL + +++ +++ +R Sbjct: 255 GPLAARFSELTVVELLYLAVGQLTYERTTELLTQTALAVRR 295 >UniRef50_A8UBX8 Phosphosugar-binding transcriptional regulator, RpiR family protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UBX8_9LACT Length = 285 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 69/284 (24%), Positives = 140/284 (49%), Gaps = 8/284 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L I ++E+KIA+ + + ++ +S+ +A + G S +++++F + +G + Sbjct: 4 NVLLTIREKKITLPQSEKKIAETILRDPVKVIQMSATDLATEAGSSSAAVIRFCRSIGIK 63 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GFTEL++ L + + +L++ I +D++LE + +K+ ++T +LD Sbjct: 64 GFTELKLQLSAD-------SQGIKDNLYTDILADENLEQVKKKMLINTNHLFKETNNVLD 116 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 +++++ E++ ++ I + GLG S +V D+ K ++G V C D H+ T Sbjct: 117 TKQIERVSELLHESSIIYLYGLGASHIVASDIQQKFSRMGKIVVCSLDQHLLVTSMAVAG 176 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTV-SGETEW 240 + V +S SG KKE++ A++ G +A+T+ T++ L A L T + E Sbjct: 177 ENAVFFGVSNSGEKKEVLALMIMAKELGLKTVALTNNTENALSLEADIALKTAFAHEAPL 236 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 RS + + Q D+LF N ++ +++S QR Sbjct: 237 RSGATISLLTQMYAVDILFYDYASKNYDLTVTNLEKSKAAIQRY 280 >UniRef50_B5FDJ7 Transcriptional regulator, RpiR family protein n=48 Tax=Gammaproteobacteria RepID=B5FDJ7_VIBFM Length = 283 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 124/283 (43%), Positives = 184/283 (65%), Gaps = 1/283 (0%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L KI N S + N KI DF+ + + + S SS+ +A ++G+SQSSIVK Q+LG Sbjct: 1 MNILEKIQNQRSNLSSNGIKILDFILDDPASISSYSSQALAAKVGVSQSSIVKLTQRLGF 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GFT ++A+I + ++ +H+ I SDDS IA+KL +EK AL T + Sbjct: 61 KGFTAFKLAIIEDLG-RKQAILEPERPIHNKINSDDSSLTIAQKLVQEKTHALIATTNAI 119 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 +++ + + ++++A IQI G+GGSAL +DL+FKL+KIG E D+HVQ + L Sbjct: 120 NFSEFELVTTLLNQAQRIQIVGIGGSALTAKDLAFKLLKIGMTALTEQDSHVQIATANTL 179 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 K DVQI ISYSGS+KEI++ A+ A +GATVIA+TS SPLR+LA+F +DT++ E ++ Sbjct: 180 TKQDVQIVISYSGSRKEILMAAQTAMDKGATVIALTSTKKSPLRKLANFCIDTIADERQF 239 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 RSSS+S+RTAQN +TDLLF+ L+Q+ ++ +I S R Sbjct: 240 RSSSISSRTAQNVITDLLFMTLLQIKSDKAKLLIDEISSTMNR 282 >UniRef50_A4WDW6 Transcriptional regulator n=10 Tax=Enterobacteriaceae RepID=A4WDW6_ENT38 Length = 274 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 66/280 (23%), Positives = 136/280 (48%), Gaps = 16/280 (5%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L ++ S ++ +QK+ F+ + S + ++ ++A++ S++S+ + + LG + Sbjct: 6 NLLLRLRQGVSGYSPTQQKLGSFVLNDPSRVLYLTITELARESDTSEASVTRLCRTLGCK 65 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+TE +MAL + H + D ++ I + LAL+ T LLD Sbjct: 66 GYTEFKMALALDVQRE-----------HVPLKKGDEIDEIVEE----SILALQDTSRLLD 110 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L K + + ++ + I G+ SA++G L +KL+++G +D H + + L Sbjct: 111 REILLKAAQALHQSRSVYIYGVAASAIIGDYLHYKLLRLGKPAQLFSDMHRASMNATTLT 170 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 D+ +AIS SGS ++++ + ARK+GA V+A+++ SPL L+ L E Sbjct: 171 SDDLVVAISSSGSTRDLLHVVKLARKRGAHVLALSNTPRSPLTSLSDMLLVAAKPEGPLS 230 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 + +++ + + +LL ++ L+ Q+++ T Sbjct: 231 AGALNAKVGVMLLVELLATTMISLD-DRYGDASQQTASAT 269 >UniRef50_A8RDU7 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RDU7_9FIRM Length = 281 Score = 240 bits (614), Expect = 3e-62, Method: Composition-based stats. Identities = 66/282 (23%), Positives = 135/282 (47%), Gaps = 3/282 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L K+ + +E ++ ++ N ++ S+S++++A + S +++++ ++L Sbjct: 3 MSVLVKLRE-YHTLSNSENEVRMYILRNSKKVISMSTQELAAKSYTSPATVIRLCKRLEL 61 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +G++EL++ L E A ++ DSL + K+ ++E+T LL Sbjct: 62 KGYSELKIQLASEIKAFETMNLDVVD--QTTFKKGDSLTELIDKVTDISIHSIEETRLLL 119 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 DY L + I A I + G+G S + D +K M+IG ++C + Q + Sbjct: 120 DYEVLLCVARQIMDASIIDLYGVGASNNIAFDAGYKFMRIGKSISCLSLIDRQRIQAINS 179 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 I ISYSG EI+ A+ K ++IT + L L + L S E+ + Sbjct: 180 DSSHFAIIISYSGETPEIIEIAKILEKNNVPAVSITGSIQNQLVNLVEYNLFVSSRESNF 239 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 R+ ++ +RT+ + DL+++ + LN +S K + ++ +++ Sbjct: 240 RNGAIVSRTSTLYMLDLIYITCISLNYDDSAKRLGQTLTISK 281 >UniRef50_B9DJX2 Putative RpiR family transcriptional regulator n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=B9DJX2_STACT Length = 288 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 80/285 (28%), Positives = 128/285 (44%), Gaps = 10/285 (3%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 + I T+NEQ IA FL + ++ +S++ + S +++++ A KLG +G Sbjct: 6 LIIHIREQMKHLTKNEQHIAQFLLEHPEKVLEMSAQTLGDVTKTSSATVIRCAHKLGFKG 65 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 F +L+++L H + I D+S I RKL LE T LL+ Sbjct: 66 FVDLKLSLSRNLPQHEA-------HNYKEIAQDESPREIKRKLLSRAAYTLETTEVLLED 118 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 L+ +++ + I + G+G S +V D+ K + G V AD HV ATV K Sbjct: 119 QALEALVDKLYDVQKIVVFGVGASHIVAEDIYQKFTRAGMEVIQSADAHVLATVLAGYHK 178 Query: 183 GD--VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDT-VSGETE 239 D + I +S SG +E + A A GATV AITS +DS L A L S E Sbjct: 179 KDNVLFIGVSNSGHNQETLRLAHVAHYYGATVAAITSRSDSKLAGEADIVLLHDASSEKS 238 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 R ++ S+ AQ D+LF + + + + + + + Sbjct: 239 LRLAATSSLIAQLMTVDILFYTYLSKDYQAHVAHLSETKKAVEMY 283 >UniRef50_A0Z4E2 Transcriptional regulator n=3 Tax=Bacteria RepID=A0Z4E2_9GAMM Length = 291 Score = 240 bits (613), Expect = 4e-62, Method: Composition-based stats. Identities = 68/284 (23%), Positives = 124/284 (43%), Gaps = 8/284 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 LT+I A ++++ KIA + A+ S +A+Q +S+ S+ +F ++LGA Sbjct: 6 NVLTQIQAALPGLSKSDTKIAHVVLADPEAATHASIALLAQQANVSEPSVNRFCKRLGAT 65 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ + ++ L A ++ + +D++ KL AL L Sbjct: 66 GYPDFKIWLARSLVAG-------VRYISQVVDPEDTVTTYPGKLVDNTVNALLLAREQLP 118 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L+ +E + A I G+G SA V +D K + V D + ++ Sbjct: 119 LKTLEVAVEHLDAAGRIYFFGMGTSAAVAQDAEHKFFRFQTPVTTHTDPLMLRMLAAGGS 178 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 +GDV + IS++G + IV A A GATVI++T+ DSPL +++H + + E Sbjct: 179 QGDVFVFISHTGRTEAIVDAAALASASGATVISLTA-QDSPLAQVSHCVIGLEAPENTED 237 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 M++R + D+L G+ ++ + R E + Sbjct: 238 YLPMTSRIVHLVIIDILVTGVTLKRGEPCIEHLARIKESLLPTR 281 >UniRef50_Q03CI3 Transcriptional regulator n=10 Tax=Lactobacillaceae RepID=Q03CI3_LACC3 Length = 280 Score = 240 bits (613), Expect = 4e-62, Method: Composition-based stats. Identities = 76/284 (26%), Positives = 134/284 (47%), Gaps = 7/284 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 +L ++ + E+K+A +LQA+ + ++++ G+S ++I +FA+ LG Sbjct: 3 DFLVQLQIYKPNLSGQEKKLAAYLQAHPDHASQANISELSQLTGVSTATISRFAKALGYT 62 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 F LRMAL + L + ++ DS++ +A+K+ AL T A LD Sbjct: 63 NFQALRMALAQ-------TSPEDDHALFAELSPKDSVDTLAQKIFTSNIDALRTTLANLD 115 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L K ++ I+ A + + GLG S LV D K ++ VA AD H+Q + L Sbjct: 116 TDALTKAVKWITHAEHLGLFGLGASNLVALDGYHKFLRTAIPVAYAADYHMQLMAATHLG 175 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 D I S+SG K+ + AE A+KQ +I IT S L ++A V+ E+ +R Sbjct: 176 PRDAMILTSHSGEDKDAIALAELAKKQQVPLIVITGSPTSRLVKMADAAFVAVAEESRYR 235 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + ++ A+ S+ D LF+ D ++ + ++ + Sbjct: 236 TEALHALIAEISIMDTLFMISAIKTDSQTAPLFRQVRATIDATR 279 >UniRef50_C0X148 RpiR family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X148_ENTFA Length = 295 Score = 240 bits (613), Expect = 5e-62, Method: Composition-based stats. Identities = 67/283 (23%), Positives = 131/283 (46%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 +I + E+KI+D+ + S L ++ +A ++G+SQSS+ +F +K+G G Sbjct: 6 LDQRIRIKKPNLSLTEKKISDYFVHSESLLTQMTLESLANEIGVSQSSVYQFVKKIGYSG 65 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 F E ++ + + N +++ I+ DD IA+K+ + +L L Sbjct: 66 FQEFKIDIARNSNYQPTFQNVNSVNGADDISPDDDSITIAKKVLQANIYSLSNATQFLTK 125 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 L ++ ++ A + G GGS++V D K ++ YR D H+Q + L Sbjct: 126 ELLDNVLALMYSAKTLHFFGQGGSSIVAFDSFHKFIRTNYRCNYIFDYHMQLSFVTKLTS 185 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 D S+SG KE + A +K A +I +T + S L L+ + V+ E +R+ Sbjct: 186 EDCVFIFSHSGKTKESINLARQVKKTNAKMITLTGNSGSELAGLSDEAIIVVTEEGLFRA 245 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S+++R + +V D+L+ + N ++ +++ + K Sbjct: 246 ESLASRISYLTVMDILYTNTMYHNFDQNADSLKKIRDNISTTK 288 >UniRef50_A2RL41 Transcriptional regulator, RpiR family n=4 Tax=Lactococcus lactis RepID=A2RL41_LACLM Length = 283 Score = 239 bits (612), Expect = 6e-62, Method: Composition-based stats. Identities = 77/285 (27%), Positives = 142/285 (49%), Gaps = 6/285 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L I S FT E+KIAD++ ++ S++++A ++G S +++V+F++KLG Sbjct: 1 MDTLLIIRQNYSNFTTVEKKIADYIFEVGEKMLEKSAQEVASEIGSSSAALVRFSRKLGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF++L+ L Y+ + + + ++ I KL +E T A L Sbjct: 61 DGFSQLKQKLSASYAVHED-----DEDYYKEVNDSETPSSIKNKLKVRVNHMVETTNAAL 115 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + + +I +A I + G+G S++V +D+ K +IG +V D H+ + Sbjct: 116 SDDEIMAAVALIDEAESIFVFGIGASSMVAQDIFQKFSRIGKQVFFIQDAHLFVSSLSIS 175 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGE-TE 239 + + I IS G KE++ A R +IAITS +S L +++ + L +VSGE + Sbjct: 176 DRKTIFIGISMKGETKEVIELARVVRGMEIPIIAITSREESTLGQMSDYILHSVSGEDYQ 235 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 R+++ + AQ V D+LF V + ES ++++ + + L Sbjct: 236 MRTAATMSLMAQLYVVDILFYMFVSEHFTESYDKLEKTRDAIKLL 280 >UniRef50_C0C246 Putative uncharacterized protein n=2 Tax=Clostridium hylemonae DSM 15053 RepID=C0C246_9CLOT Length = 292 Score = 239 bits (612), Expect = 7e-62, Method: Composition-based stats. Identities = 67/284 (23%), Positives = 130/284 (45%), Gaps = 6/284 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L T E+++A+F+ A+ E+ +S +++A + +++IV+ + +G Sbjct: 9 NILATTRFLLPSLTAAEKRVAEFVLASPKEVTRMSLKKLAVRCECGEATIVRLCKTIGVS 68 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ EL+ L + K + +++ + I ++ L L +T + Sbjct: 69 GYAELKSLLETQLQLPAVKEESVR------LSTGQGMGEIVARVFELNILNLRRTLEVAA 122 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + EV+S A I +G + S + +IGY ++D VQ + +K Sbjct: 123 VEEYENACEVLSTANKICFFAIGDAMFPCSYASLRFRRIGYDCYADSDADVQIVNACNMK 182 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 +GDV IAIS+SG K++V A+ +GA I IT S L + + L V+ +T Sbjct: 183 EGDVAIAISHSGRTKQVVEAMRIAKSRGAVTICITKAGKSELTKYSDIVLYNVTTDTTVD 242 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 ++ R A+ ++ D +++G++Q + S +Q SE + K Sbjct: 243 KEIIARRVAEQAMLDAVYMGVLQKMEANSFARLQEVSENLKVNK 286 >UniRef50_D0R5V5 Transcriptional regulator n=10 Tax=Lactobacillus RepID=D0R5V5_LACJF Length = 272 Score = 239 bits (611), Expect = 7e-62, Method: Composition-based stats. Identities = 66/283 (23%), Positives = 141/283 (49%), Gaps = 14/283 (4%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M ++ + + + T++E K+A+++ + + + + + ++IV+ +KLG Sbjct: 1 MEFIQRYNQNKDKLTKSENKLANYIATHTEHVIYDTIKSLGTANNTGDATIVRLCKKLGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF++L++AL + + K++ A + ++ K+ ++E+T L+ Sbjct: 61 SGFSDLKIALAQDSMMTTSKSHEEAQ----------TSSELSSKVL---ISSIEKTEELI 107 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + + L++ + +++KA I I GLG S RD ++IG E+D H+Q V+ L Sbjct: 108 NPSVLKQAVSLLAKARRIHIFGLGHSGESARDYERTWLRIGLIANAESDPHIQVQVATLL 167 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 K D+ + +S SG K+ + A++ GA +IAIT+ SP+ +L +L T E Sbjct: 168 SKDDLVVGLSLSGHTKDTYDSLKVAKEYGAKIIAITNDLTSPIAQLGDVSLQTSVSE-FM 226 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 +++ + +Q + D+L +LN V+ K+ +++ + Sbjct: 227 NIGTVAGQVSQLYLCDVLAREYEKLNKVDVDKIKEQALAAVMK 269 >UniRef50_Q040R4 Transcriptional regulator n=8 Tax=Lactobacillus RepID=Q040R4_LACGA Length = 283 Score = 239 bits (611), Expect = 7e-62, Method: Composition-based stats. Identities = 74/285 (25%), Positives = 130/285 (45%), Gaps = 6/285 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M TK+ N F +KIAD+L A+ ++ + K S +S+++F Q+LG Sbjct: 1 MDLSTKVLNNYPNFKGASKKIADYLLAHPKTFLQEDAQGLGKMTKTSAASMIRFCQQLGF 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +G + ++ L + E+T + H D+ ++ +KL E EQT L+ Sbjct: 61 KGLKDFQIQLAQDTPQDNEETIDPIVDHH------DNPHIVLQKLLSSIEKNTEQTAHLI 114 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D L + I + A I + G+G S+L +DL +K ++ V D H+ Sbjct: 115 DGLALNQAINFLKNADRIYLAGVGASSLPAQDLYYKFIRSDKNVVFNQDIHIALERICYS 174 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 D + SYSG +EI+L A+ ARK +I +T SPL LA L + E Sbjct: 175 HSTDALVIFSYSGLTQEILLMADQARKNHTPIIVVTRSRQSPLVELADVVLGVSTDEKLL 234 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 R ++++ ++ V+ +LF+ + + + + +T +LK Sbjct: 235 RVGAINSLFSEMFVSSVLFLATINQELPRLEERFRETELITNQLK 279 >UniRef50_B1R0U2 Transcriptional regulator, RpiR family n=9 Tax=Firmicutes RepID=B1R0U2_CLOBU Length = 284 Score = 239 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 66/284 (23%), Positives = 141/284 (49%), Gaps = 6/284 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + I + F E E+KIAD++ ++L ++ ++A+ G S +++ +F +K + Sbjct: 6 SIIDTIYAEYNSFFEAEKKIADYILKYGTKLIEMTISELAEAAGTSDATVTRFCRKCNMK 65 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF L++ L E S S+++ + + S+++++ + K ++QT ++ Sbjct: 66 GFHHLKITLAKELSESQKEDTRVSGDV-----SEENIKESLNNILFNKIEEMKQTILTIN 120 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + ++I++++ A +Q +G + V D +K ++G Q + LK Sbjct: 121 EEKFKEILQILRNAGIVQFVAVGNTIPVALDGCYKFNQVGVASVANTIWETQIAYTYNLK 180 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 + DV IAIS SG+ K ++ E A+++GA IAIT+ SPL +L+++ + T + E + Sbjct: 181 ENDVVIAISNSGASKRLIDVIEIAKEKGAVTIAITNSDKSPLAKLSNYHIKTATREKLFL 240 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +R + +V ++LF+ + + + K + R + K Sbjct: 241 EEYYFSRISAMTVIEILFL-FMTVGKHDVYKTLSRHEQSIADDK 283 >UniRef50_C5EPZ9 Transcriptional regulator n=2 Tax=Clostridiales RepID=C5EPZ9_9FIRM Length = 295 Score = 239 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 70/289 (24%), Positives = 134/289 (46%), Gaps = 9/289 (3%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 +I + ++EQK AD+ ++++S MA+ G+SQ ++++F + LG +G Sbjct: 5 LEYEIKRIYASLRKSEQKAADYYLGYDGPVETMSIAAMARAAGVSQPTVMRFVKALGLEG 64 Query: 63 FTELRMALIGEYSASREKTNATA--------LHLHSSITSDDSLEVIARKLNREKELALE 114 F E + ++ L I++ D E + ++ + L+ Sbjct: 65 FKEFKYQVLKASMGGNGSGMGEEEGGRSEEVLRYGYEISARDRPEEVPGRVVAQSVSYLD 124 Query: 115 QTCALLDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQA 174 + + + + ++I A I + + SA V DL KLM +G+ D ++Q Sbjct: 125 DALKHISPSSIGRAAKLICGARQIAVYYVENSASVAGDLVTKLMYLGFNCIMYNDIYLQH 184 Query: 175 TVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTV 234 + L DV I ISYSGS K V + A+K+GA IAIT+ S + A L T Sbjct: 185 ISAGNLDSRDVAIGISYSGSSKNTVDVMKLAKKKGAATIAITNFEHSLIAGHADILLCTS 244 Query: 235 SGETEWRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 S + + +++ +R +Q +V D++++G++ + + + SS + +R Sbjct: 245 SQQLLY-GNAIFSRMSQTAVVDMIYMGIILRDYGHFTEKLDESSRIIRR 292 >UniRef50_C8SX74 Transcriptional regulator, RpiR family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SX74_9RHIZ Length = 314 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 62/278 (22%), Positives = 124/278 (44%), Gaps = 8/278 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 ++ + ++ SE E+++AD + +V S+ +A++ G+S+ ++ +F + +G + Sbjct: 27 DIISLVKDSYSELRRAERRVADVVLDDVKYAVDASNAALAQRAGVSEPTVTRFCRAIGCE 86 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G + ++ L + + + E AL++ LD Sbjct: 87 GLRDFKLKLAQSLVVGALYLAKSPAPGSGNGMP------FWNAVFGEARRALQEAERQLD 140 Query: 122 YARLQKIIEVISKAPFIQITGL-GGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 LQK E+I+KA + + GL G S+ + ++ ++L + G V + D ++ + L Sbjct: 141 PVELQKAAELIAKARQVTVFGLGGSSSALAQETQYRLFRYGITVNAQCDPYLMRMTASTL 200 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 K GD+ IAIS +G +E++ E A+ A I +T+ D+ L R L E Sbjct: 201 KPGDLVIAISATGRTREVIEAVELAKHYRANAIGVTA-PDTELARACDVRLAVAVPEYPD 259 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSS 278 ++R A ++ DLL V D + + ++R Sbjct: 260 TLKPTASRYAFLAMIDLLAVASAYKLDASARETVRRIK 297 >UniRef50_Q2J8J9 Transcriptional regulator, RpiR family n=1 Tax=Frankia sp. CcI3 RepID=Q2J8J9_FRASC Length = 293 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 77/263 (29%), Positives = 126/263 (47%), Gaps = 7/263 (2%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 L +I + + EQ++A + A+ + S ++A+ G S +++V+F Q LG +G Sbjct: 18 VLERIRALSASLSSAEQRVARQVLADPVAMIHQSVSELAQVSGSSPATVVRFCQSLGLRG 77 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 + EL++ALI E T L +++ D + IA K+ AL + +D Sbjct: 78 YQELKLALIRE-------TLPVERQLVDEVSAADGPDEIAGKVLGGAASALTEAARGIDG 130 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 L I +++ AP +G SA + D +++L +G D HVQ ++ L Sbjct: 131 GVLAAIADLVVAAPRTLFVAVGTSAPLAMDAAYRLTTVGVDARFAGDAHVQHVTARMLAA 190 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 GD+ +A+S++GS E + AA GA AITS SPL L + S ET +R Sbjct: 191 GDLCVAVSHTGSTAETLAAMRAAVDAGAHTAAITSFARSPLTELVRHAVVVGSRETAYRI 250 Query: 243 SSMSTRTAQNSVTDLLFVGLVQL 265 +M++R SV D LF +V Sbjct: 251 EAMTSRIVHLSVLDALFALVVVR 273 >UniRef50_P37767 Uncharacterized HTH-type transcriptional regulator yfhH n=149 Tax=Enterobacteriaceae RepID=YFHH_ECOLI Length = 282 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 95/284 (33%), Positives = 162/284 (57%), Gaps = 3/284 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L +I ++++K+AD+L + +SS+Q+A + G+SQSS+VKFAQKLG Sbjct: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF L++AL ++ + + ++ +H+ I DD L ++ KL +E A+ T + Sbjct: 61 KGFPALKLALSEALAS---QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 +L + + ++ A I +TG+G S LV ++ ++KLMKIG+ A D H QA Sbjct: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 D+ +AISY+G ++E+ L A+ + G V+AIT T + L++ A L T++ E Sbjct: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 S+S+S AQ +TDLLF+ L+Q + + + I+ S L ++L Sbjct: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 >UniRef50_C1IBM1 Phosphosugar-binding transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IBM1_9CLOT Length = 266 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 63/282 (22%), Positives = 138/282 (48%), Gaps = 17/282 (6%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L ++ +EF++ E+ IAD++ + ++++++ +AK++G S ++I +FA+K+G Sbjct: 1 MDILCEVQRKYNEFSDKEKDIADYIMQHGDKIKNINITDLAKEIGTSGATITRFAKKIGC 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 F ++++ L + + I +D I + +E+T L+ Sbjct: 61 DSFVDMKIKL-------------GSNKVELPINDEDG---IFSYTYQYYNEVIERTKMLI 104 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D + K++ I KA I I G+G S L +++ +L+++G+ V C +D+H+ S + Sbjct: 105 DKEEIFKVVNEIKKAKNIYIYGVGSSGLTCKEMMQRLLRMGFNVHCISDSHMMIINSSIV 164 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + D+ I IS SG +E++ +++ GA +++IT S + + + + Sbjct: 165 SENDLVIGISISGETQEVIHSLRKSKENGAKIVSITGFEGSTVSKYSDIKFIVYNPNFVD 224 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 RS ++T+ + + D L ++ + S KM + + Sbjct: 225 RSRFINTQFSAMYLLD-LISMVLLKDINLSNKMQTTINAIIN 265 >UniRef50_D0I0X8 Sialic acid utilization regulator RpiR family n=1 Tax=Vibrio cholerae CT 5369-93 RepID=D0I0X8_VIBCH Length = 282 Score = 237 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 70/283 (24%), Positives = 139/283 (49%), Gaps = 10/283 (3%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L+++ ++ + +ADF+ +N Q ++ ++A+ S++++++ + LG + Sbjct: 8 NLLSRLRYGMEGYSPKLKTVADFIVSNADSAQYLTITELARDTMTSEATVIRLCRDLGFK 67 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+++ RMAL E S + N D + I +L+ T L+D Sbjct: 68 GYSDFRMALAIEISQPQFTKNNDVAKEDGDRIDDATQSAI---------TSLQDTSILID 118 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 ++ +I ++I +A I G+G S++VGR LSF+L +IG DTH+ A + Sbjct: 119 RKQINRICQMIHQADNIHCVGVGASSIVGRYLSFRLTRIGKSSTMFEDTHIAAMRAVKST 178 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 D+ AIS SGS K++V A A+KQ + V+++T++ SPL + + E Sbjct: 179 PSDLWFAISSSGSTKDVVYVATRAKKQQSPVVSLTNIRHSPLSVTSDEVMVAARPEGPLT 238 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 + +++ + + D+L LV + E + ++ ++E+T Sbjct: 239 GGAFASKVSALLLVDILINQLVAEH-AEYAESVKDTAEVTMAF 280 >UniRef50_D0KLH9 Transcriptional regulator, RpiR family n=1 Tax=Pectobacterium wasabiae WPP163 RepID=D0KLH9_PECWW Length = 320 Score = 237 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 72/284 (25%), Positives = 132/284 (46%), Gaps = 4/284 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 T I+N ++ Q IA+++ N S + + +++A ++G+S+++IV+F + +G Sbjct: 35 KVRTYIANILHGLSDTNQTIANYVLQNPSMVAQLPVKKLAVEIGVSEATIVRFCKHIGYA 94 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G EL+ AL E + +L + I +D+ +A+K+ + A+++T L+D Sbjct: 95 GLLELKSALNRELF----DDSDLSLPVTPDILMNDTRHDVAQKIALTVDRAVKETIDLID 150 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + +I+ + A + G G S L + K+ +IG D LK Sbjct: 151 MQTINQIVSLFISARRVMFIGFGASGLAALEARDKMNRIGIDSDAFTDRFSMTLKLANLK 210 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 D+ +A S+SG E+V + A K GAT +AIT T SPL L ++ L T ++ Sbjct: 211 PDDLVVAFSHSGETPEVVNAFKLAEKAGATRLAITHSTHSPLTSLGNYVLLTCGESERYQ 270 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S+ TR +Q + + L L + N + L + + Sbjct: 271 GDSIGTRVSQLFMIEFLCTELTKQNFKDFSSQSISIKALLIKER 314 >UniRef50_C2H8J8 Bifunctional RpiR family transcriptional regulator/sugar isomerase n=16 Tax=Enterococcus RepID=C2H8J8_ENTFC Length = 286 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 67/285 (23%), Positives = 150/285 (52%), Gaps = 9/285 (3%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M +++I + +++ E+K+A+++ N+ ++ ++++ ++A+ G+S ++V+F++K+G Sbjct: 5 MSVISRIESMMEDYSSAEKKLANYIIGNIEKVPTMTANELAEASGLSAPTVVRFSKKIGF 64 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 Q T+ ++ + E ++ S I +++S I KL ++A+++T +L Sbjct: 65 QSLTDFKITISTELQTGIDEG-------FSDIEANESFYSIKNKLGNNAQVAIKETVDIL 117 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + +QK++E + A + + G+G S+LV D+ K ++G + E D HV + Sbjct: 118 EEETIQKVVECLETAESVFLYGVGASSLVVEDILQKWSRVGKPIIFEKDIHVLLPQLVSN 177 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSG-ETE 239 +K V +S SG ++V AE A+ +IA+T ++PL ++A + T E Sbjct: 178 EKKKVLWLVSNSGRSTDVVALAELAKNMNIEIIALTQFGNNPLSKIADVLVQTSRPKEIT 237 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 RS++ ++ AQ + D++F + N + ++++ E Q Sbjct: 238 NRSAATNSLLAQFATIDIIFYFYMAKN-ESLSEKVKKTREAIQDY 281 >UniRef50_D0XGH5 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XGH5_VIBHA Length = 296 Score = 237 bits (605), Expect = 4e-61, Method: Composition-based stats. Identities = 65/281 (23%), Positives = 129/281 (45%), Gaps = 9/281 (3%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSV-SSRQMAKQLGISQSSIVKFAQKLGAQ 61 + I T EQ IA+ +Q S +++A++LG+S + IVK ++KLG Sbjct: 20 VIPNIRMRMPSLTRTEQSIAENFLK-PHFMQKSTSIKEVAERLGVSTALIVKVSKKLGFS 78 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF +L+ AL ++ + + DDS E I K+ + AL + +D Sbjct: 79 GFKQLKDAL-------NAHHHSDSYAPSEQLQPDDSCEQIVTKVLQNSINALTEILNFVD 131 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + E I A I++ GGS ++ D KL++ G R + D H+ + L Sbjct: 132 ANMVSAAAEAIINARNIELYAAGGSNIICEDFQHKLLRFGIRASVPRDRHLMLMSASVLS 191 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 + DV + +S+SG +++ A++ GAT+I+IT+ + L +L+ + L + Sbjct: 192 EKDVVLVVSHSGQTVDLMDAVRLAKQSGATIISITNNFHAELSQLSDYPLYAPASPEPLL 251 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 + R + ++ D L+ + ++ + ++++++ Sbjct: 252 GKNGIARLVKLAMIDSLYATIASKIPDQAEENLEKTTKAVA 292 >UniRef50_C2HLD1 Transcriptional regulator n=3 Tax=Lactobacillus RepID=C2HLD1_LACAC Length = 284 Score = 236 bits (604), Expect = 5e-61, Method: Composition-based stats. Identities = 72/285 (25%), Positives = 135/285 (47%), Gaps = 8/285 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + I S+ + EQ + D++ AN + S S ++++K GIS ++IV+F +++G Sbjct: 3 NIFSIIKGKKSQLPKKEQLLGDYIIANPENVISSSIQKLSKDTGISTATIVRFCREIGTN 62 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF++L++ L+ ++ + + + + + I + E A+E T + L+ Sbjct: 63 GFSDLKLQLVA-------AQSSVNNNDYHEFDAGEGIAAIKNTMAARFESAIEATQSGLN 115 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 ++K + I + I + G G S +V D+ K M++G + +D HV + Sbjct: 116 DNSVEKAVRKIYNSSSILVYGAGASGIVASDMYQKFMRVGKNINYISDLHVALAQLASFT 175 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVS-GETEW 240 D+ I IS G E+ + A K G + +T+ S + + A L T GE Sbjct: 176 SDDLLILISNDGKTTEVSDIQKVADKFGIPTLLLTANPRSFVAKKADLVLLTQDIGEPSI 235 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 RS + ++ +Q V D+L V ++ E LK ++RS+E T K Sbjct: 236 RSGATTSLISQMFVVDVLVFSYVSVHSDEVLKKLKRSNEATAIHK 280 >UniRef50_Q1WQV4 Transcriptional regulator, RpiR family n=4 Tax=Lactobacillus RepID=Q1WQV4_LACS1 Length = 274 Score = 236 bits (603), Expect = 6e-61, Method: Composition-based stats. Identities = 65/285 (22%), Positives = 135/285 (47%), Gaps = 14/285 (4%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L I S + E+K+A + N E+QS++ ++AK+ G+S ++I +F +++ Sbjct: 1 MNLLNNIEAIFSTLSRQERKVALKVLQNPQEVQSMNITKLAKKAGVSNATITRFVRRMEC 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 F + ++ L ++S E ++ + + K+ + L+ T L Sbjct: 61 SDFHDFKLKLAISAASSPEVPVSSE------------SDSMGDKVYEFYQKVLQGTWKQL 108 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D + I+ I+KA + + GLG S ++ + +L+++G C D+H+ S + Sbjct: 109 DTDTIHNIVHAITKARRVYVYGLGSSGYTAQEFTQRLIRMGIAAFCTVDSHMMFIDSTIV 168 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 DV IAIS SG+ ++ + A+++G +I+IT SPL L+ ++ + Sbjct: 169 NSDDVIIAISQSGNTDDVNVACSLAKQKGTKIISITGFYQSPLIELSTWSAVVKNSNFVD 228 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + ++++ A V D++ + L++ E + ++ EL K Sbjct: 229 NTRFINSQLAIVYVIDIITMELMEK--SEYSSTMNKTVELIMDRK 271 >UniRef50_B7UNF1 Predicted transcriptional regulator, RpiR family n=11 Tax=Escherichia RepID=B7UNF1_ECO27 Length = 281 Score = 236 bits (603), Expect = 6e-61, Method: Composition-based stats. Identities = 65/288 (22%), Positives = 131/288 (45%), Gaps = 11/288 (3%) Query: 1 MLYLT---KISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQK 57 M +T I + + E+K+AD++ ++ E+ + S +++++ S+++IV+ +K Sbjct: 1 MNNITVKSLIQSNYPTLHQAEKKVADYILSHAHEVVNYSVTELSEKSHASEATIVRTCKK 60 Query: 58 LGAQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTC 117 LG QG+ L++AL E + + T + +A L +++ L Q+ Sbjct: 61 LGYQGYYHLKIALAKEV--------INPDNSYPDNTDFTDITSLATFLLKKQAEDLIQST 112 Query: 118 ALLDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVS 177 + L+ I+++++ I G S + ++K ++G + +Q + Sbjct: 113 QFFNAEVLESILKLLANCDTIFFFAAGNSNPLAVYGAYKFSQLGLKTVVHVSPEMQINAA 172 Query: 178 QALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGE 237 ++ K D+ I IS SGS +V + +++GA + IT+ SPL +L+ L+T + Sbjct: 173 YSMGKRDLAIGISNSGSTNLMVDIFKVVKERGAKSVCITNYIKSPLSKLSTHQLNTAVSD 232 Query: 238 TEWRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + + STR V D+L + + N K R L R K Sbjct: 233 KIFFEAFDSTRVPAMGVIDMLVLLFMYKNKAHYEKYRTREEFLGSRFK 280 >UniRef50_B6G0W9 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G0W9_9CLOT Length = 310 Score = 236 bits (603), Expect = 7e-61, Method: Composition-based stats. Identities = 65/280 (23%), Positives = 142/280 (50%), Gaps = 4/280 (1%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 L +I+ +++E+K+ADF++ + + ++ +++AK+ G+S+ SI++F++ +G G Sbjct: 31 LLFRIATKYMALSKSEKKVADFIKNFNGKAEKLTMKKVAKEAGVSEPSIMRFSKSIGLDG 90 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 F EL+ L ++ I +D++++I K+ E + + Sbjct: 91 FNELKYCL---MKTKKDDEGTMKPLHGFDINREDTIDMIPGKIVMTVENQINSMLESISL 147 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 +I I A + I + S DL+ KL+ +G V D+++Q + L Sbjct: 148 KSYSDMINCIINAKNVDIYSVENSVSSANDLATKLLYLGINVKMYTDSYLQKISAYNLTS 207 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 DV I ISYSG+ K+ V + A+K+GAT + IT+ DS + + A + T S + + Sbjct: 208 EDVAIGISYSGNSKDTVEMIKTAKKRGATTVVITNYKDSKIVKYADILICTSSDQMLY-G 266 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 ++ +R Q + D++++G++ + + ++++ ++ + + Sbjct: 267 DAIFSRAIQLVINDMIYMGIIHSDYDKYIEILNKNEKAIR 306 >UniRef50_A6D304 DNA-binding transcriptional repressor RpiR n=1 Tax=Vibrio shilonii AK1 RepID=A6D304_9VIBR Length = 289 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 66/283 (23%), Positives = 130/283 (45%), Gaps = 9/283 (3%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSV-SSRQMAKQLGISQSSIVKFAQKLGAQ 61 + I T+ EQ IA+ LQ S ++A++L +S + IVK ++KLG Sbjct: 13 VIPNIRMMMPSLTKTEQSIAENFLQ-PHFLQKSTSINEVAERLSVSPALIVKVSKKLGFS 71 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF +L+ +L ++ + + DDS E I K+ + AL + +D Sbjct: 72 GFKQLKESLYA-------QSETQSYAPSERLLPDDSAEKIVSKVLQNSINALTEILNFVD 124 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + + E + KA I++ +GGS+++ D KL++IG + + D H+ + + Sbjct: 125 VSMVDAAAEALLKARNIELFAVGGSSIICEDFQHKLLRIGIKSSVPKDRHLMLMSASIMT 184 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV + +S+SG +++ A++ GATVI+IT+ + L L+ L + Sbjct: 185 DQDVVLVVSHSGQTVDLMDAVRQAKQSGATVISITNNYHAELSSLSDIPLYAPASPEPVL 244 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 + + R + ++ D L+ + + + + ++ +RL Sbjct: 245 GKNGTARLVKLAMIDSLYATMASKMPSLAEESLSKTIRAVERL 287 >UniRef50_A6LRG7 Transcriptional regulator, RpiR family n=2 Tax=Firmicutes RepID=A6LRG7_CLOB8 Length = 291 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 66/284 (23%), Positives = 135/284 (47%), Gaps = 8/284 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L KI E E+KIAD++ N + ++ ++A + +S+++IV+F +K + Sbjct: 15 SVLDKILCIYKSLHEAEKKIADYIINNKERVIEMTVSELALESSVSEATIVRFCKKCDLK 74 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF +L++ + E + + L + ++ + + K L+QT ++++ Sbjct: 75 GFYDLKIKIAKEMVNLKSSNISNELDSN-------NIMQSLQNILANKIEELKQTISMMN 127 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 +++I+E I A +Q +G + V D ++K ++G Q S L Sbjct: 128 EGNIKRILEAIKGARIVQFAAVGNTIPVAMDGAYKFNQLGISSVTNTIWETQLAFSYTLT 187 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 K DV I IS SG+ KE+V E A ++ AT I+IT+ +SP+ + + ++T + E + Sbjct: 188 KEDVVIVISNSGASKELVALLEIANERQATTISITNHENSPVANKSKYHINTSTREKLFL 247 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +R + V ++L++ L+ + ++ I + + K Sbjct: 248 DEFSFSRVSAMVVIEILYL-LLTRDKEDAYNWISQHEQSIAEGK 290 >UniRef50_UPI000197BCAC RpiR family transcriptional regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197BCAC Length = 283 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 77/277 (27%), Positives = 143/277 (51%), Gaps = 5/277 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + K+ A + E+++A+++ AN +QS+S + +A++ +S ++I++ KLG Q Sbjct: 1 MIDLKLREARDSLSTKEKQVAEYIIANKKNMQSMSIQSLAQENKVSTTTILRLCHKLGYQ 60 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF++L++ LI + + L I +DS+E + K+ ++ ++E+TCAL++ Sbjct: 61 GFSDLKIDLISSINHK-----SYGTLLQEDIDINDSMETVNHKVGLIEKSSIEETCALVN 115 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + E+ISK+ I I G G S LV ++ ++L+KI V C D +Q ++ L Sbjct: 116 LNAFKLANELISKSKKIVIYGAGSSGLVAKEFEYQLIKIKKDVNCHLDYSIQFSIVNTLD 175 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 + D+ I IS+SG E + AR+ IAIT + S + LA L T+S E R Sbjct: 176 QNDLVIVISHSGENHECIKLLTLARELKVPTIAITKMGQSSVSSLAETVLHTISTEHVSR 235 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSS 278 + ++ +Q +V ++L L E ++ + Sbjct: 236 LIPIRSKISQLTVINMLITNLFIKQYDERIQKQISTR 272 >UniRef50_Q03CT7 Transcriptional regulator n=7 Tax=Lactobacillus RepID=Q03CT7_LACC3 Length = 289 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 66/287 (22%), Positives = 130/287 (45%), Gaps = 8/287 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M + SE +E E+KI D++ A+ + ++S +AK G S +S+ + A++L Sbjct: 1 MSVKGNYQSTRSELSETEKKIVDYVMAHSQAVLTMSVHDLAKAAGTSPASVSRAARRLQF 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 G+ EL+M L + +++ I + +L I +KL + +L +T + Sbjct: 61 SGYNELKMQLAADLKGDTNQSDD------QEIQKNATLTTIKQKLLIDANQSLRETVDQI 114 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + A + II +I ++ + + G+G S L ++++ K ++GY D ++ ++ Sbjct: 115 NEANVDTIINLIHQSDRLLVFGVGASYLAAQNIAQKWGRLGYPCHFSDDLNLFLPLAATA 174 Query: 181 K-KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSG-ET 238 + + IS SG E+VL A+ A+K G VI T L + L + A ++ T E Sbjct: 175 DVEQTLCWFISNSGESPEVVLAAKLAKKAGLQVIVTTKLGKNSLTKYADVSIQTSQPMEA 234 Query: 239 EWRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 R ++ + Q + D+L+ V + +S + Sbjct: 235 RNRFAATQSLHTQFMLIDILYYAYVSRYYDAAKIATDQSKAAVTAYR 281 >UniRef50_UPI00016945F6 hypothetical protein Plarl_13824 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016945F6 Length = 248 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 68/245 (27%), Positives = 139/245 (56%), Gaps = 3/245 (1%) Query: 40 MAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLE 99 +A+ +S+++IV+ ++ L +G+ EL++ + + + + N+ + I D S + Sbjct: 3 LAELAEVSEATIVRLSRSLNLKGYQELKLRIAADLA---QSLNSNLAESYQEIHMDASSQ 59 Query: 100 VIARKLNREKELALEQTCALLDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMK 159 + ++ +++ T ++L+ L + IEV+ A I + G+G SA++ +D KL + Sbjct: 60 SLVESISHNNMRSIQDTMSVLNIKELDRAIEVLGGARKITLFGIGASAVIAQDFKQKLTR 119 Query: 160 IGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLT 219 I D QAT++ L++ D + ISYSG+ ++I+L +AA+++GAT+I++T Sbjct: 120 INRWCEAAYDFDSQATLAANLQEKDAVLGISYSGNTQDILLAMQAAKERGATLISLTKFG 179 Query: 220 DSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSE 279 +P+ AH L T S E RS +M++R AQ +V D+L+VG+ + N E++ ++ + + Sbjct: 180 HNPVAEQAHIRLFTSSLEKSIRSGAMASRIAQLNVIDILYVGIARQNYEENILALENTRK 239 Query: 280 LTQRL 284 + + Sbjct: 240 AVKMM 244 >UniRef50_UPI00017F2FF2 transcriptional regulator n=1 Tax=Escherichia coli O157:H7 str. EC4024 RepID=UPI00017F2FF2 Length = 285 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 74/283 (26%), Positives = 139/283 (49%), Gaps = 4/283 (1%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 + T I+ +E T+ E +I F++ N +S ++A + + ++SI++F +KLG +G Sbjct: 7 FNTLINTRINELTQTEIRIYQFIKNNRMRFIDMSIAKLADAMNVGEASIIRFCKKLGYKG 66 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 +EL+ L E + + + S +S+ IA++L A+ +T AL + Sbjct: 67 LSELKTTLRLE----TDTDDTLLSKVTSLDEQTNSMTGIAQQLANNNYFAINETLALQEE 122 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 L + + +S A + G+G SA+ ++ M+I V D H S + K Sbjct: 123 QALVRAADYLSNAGQVYFYGIGMSAISVLYAKYRFMRIMANVDALIDNHTMTLNSNNVGK 182 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 DV +AIS+SG +++V + +++GA I I+ L S L + A L T ++S Sbjct: 183 KDVVVAISHSGETRDVVDALKRVKEKGAVTIVISKLQHSSLSQYADVVLLTGGTSNPYQS 242 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S + AQ+ + D+LF L+ +N +++ I S ++ + K Sbjct: 243 DSSTITAAQSFMVDVLFNALLFINRGGNVEKIISSLDIINKTK 285 >UniRef50_Q1J2N3 Transcriptional regulator, RpiR family n=2 Tax=Deinococcus RepID=Q1J2N3_DEIGD Length = 290 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 60/255 (23%), Positives = 121/255 (47%), Gaps = 8/255 (3%) Query: 20 KIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASRE 79 ++ D + + S++ ++++ G S +++V+ Q LG G+ E ++ L + SR+ Sbjct: 28 RVIDQILMDPERFLSLTIAELSEAAGTSDATVVRLVQHLGFGGYQEFKLQLSRALAVSRK 87 Query: 80 KTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPFIQ 139 ++ D+ I RK+ AL+ T L+ ++ ++ A I+ Sbjct: 88 --------ADLTVEPQDASVTILRKIFDSSNTALDDTLEHLNLEAFSAAVQAMTLARHIE 139 Query: 140 ITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIV 199 + G+G S +V ++ +++G D + L+ DV IA+S+SG++ ++V Sbjct: 140 LIGMGASGVVALSGQYRGLRLGLSCRASTDPGTFLSTCSLLEPTDVLIAVSFSGTRPQVV 199 Query: 200 LCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDLLF 259 A AR+ GA V+A+T L +PL ++ H TL + +R ++T+ Q ++ D LF Sbjct: 200 QAARLARQAGAIVVALTGLGRTPLSKVVHHTLTVSAPGDRYRPEGLATQIPQVAILDALF 259 Query: 260 VGLVQLNDVESLKMI 274 L D + + Sbjct: 260 TSLHVAQDPYLSERL 274 >UniRef50_C6J2D0 Transcription regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J2D0_9BACL Length = 284 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 67/285 (23%), Positives = 134/285 (47%), Gaps = 8/285 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 LT++ + E+E+K A ++ +E+ +S +A + G S ++I + + LG Sbjct: 5 SVLTQMEAMLEQLPESERKAAQYILTASAEVSGLSIHAVADKAGTSAAAITRLCRSLGLS 64 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF +L+M L + + + + I ++++ + +K A++ L Sbjct: 65 GFPDLKMRLSVDNAKPQRPG-------YYDIERGETIQNVIQKTVSNSLQAIQDMMLHLQ 117 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 ++++++ +A I + G+G SA+V D + K +++G + D H+ A + Sbjct: 118 PELIEQVVDSFREASVIHMYGVGASAIVAADAAQKWLRLGKQAFALQDEHLIAAALASAP 177 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTV-SGETEW 240 G + + ISYSG+ KE++ A+K G I ++ + + LA L T + E Sbjct: 178 PGALFMGISYSGNTKEVLQLFRVAQKYGVRTIGLSRFGNHKVAELADLMLYTPQAPEATL 237 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 RS + S+R AQ + D+LF E++ + ++ E T LK Sbjct: 238 RSGASSSRLAQLVMIDILFFAYASTQYEETILRLSQTHEATAFLK 282 >UniRef50_C8JWL0 Phosphosugar-binding transcriptional regulator n=3 Tax=Listeria monocytogenes RepID=C8JWL0_LISMO Length = 273 Score = 233 bits (596), Expect = 5e-60, Method: Composition-based stats. Identities = 69/281 (24%), Positives = 139/281 (49%), Gaps = 13/281 (4%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L IS+ +++EQK+A + +N E++++S +A + +S+IV+F++K+G Sbjct: 1 MDLLATISSYFPSLSKSEQKVAQLILSNPDEVENLSINDLALMANVGESTIVRFSRKIGL 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF +L++AL+ ++ ++ D + R+ L+ T + + Sbjct: 61 TGFQDLKIALVKYQTSQKQ-------------NITDESNEAKDLVYRQFVDGLQDTKSFI 107 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + +L++ ++I +A + I +G SA + LS +L ++G V D H+Q+ + Sbjct: 108 EQEKLEQAAKMIHRAEHVYILSVGTSAFIAMQLSNRLKRLGKFVEFVPDGHLQSIYVTMV 167 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 KK D+ I IS SG+ KE++ E A + GA V+ +++ +S + ++ +L S E Sbjct: 168 KKTDIVIGISKSGNTKEVIQNIELASQSGAPVVTLSNFINSKISQMGDVSLVASSKEFLS 227 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 + S S +Q + D L LV +N + +++ Sbjct: 228 DAGSFSAEVSQLYLLDTLIKVLVDINPSSYHNIRSLTNKAL 268 >UniRef50_UPI0001BCD92E RpiR family transcriptional regulator n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCD92E Length = 288 Score = 232 bits (594), Expect = 8e-60, Method: Composition-based stats. Identities = 64/271 (23%), Positives = 119/271 (43%), Gaps = 5/271 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L KI + + E+++AD++ N +++ ++ +A G S +++V+F +K G Sbjct: 6 SILEKIFSIYPVLFDAEKRLADYVLQNEAKVVDMTVSDLAAACGTSDATVVRFCKKCGCN 65 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF L++ + E + D R + K+ L QT A +D Sbjct: 66 GFHHLKINMAKEMATKPSDGAPIVGSNELDCARMDVS---LRNIFASKQEELRQTLAEID 122 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 A + ++E I A FI +G + V D ++K ++G + Sbjct: 123 PAVFRSVVERIRAARFIFCAAMGNTIPVAMDAAYKFNELGLTAISAPVWENMLAMMHTAT 182 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV +AIS SG K+++ AAR +GA ++ +T+ S + R++ L VS E + Sbjct: 183 PDDVLLAISASGETKDLMRIVSAARGRGAYIVLVTNQVHSSIARVSDRVLHAVSQERMFF 242 Query: 242 --SSSMSTRTAQNSVTDLLFVGLVQLNDVES 270 S STR + +V + ++ L+ + S Sbjct: 243 RTFSFSSTRLSMTAVIEAVYYMLLSVKRDSS 273 >UniRef50_P46117 Uncharacterized HTH-type transcriptional regulator in aarA 3'region n=5 Tax=Enterobacteriaceae RepID=YARA_PROST Length = 282 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 69/285 (24%), Positives = 140/285 (49%), Gaps = 7/285 (2%) Query: 1 MLYLT-KISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLG 59 M LT K+ + + EQ++A FL + +++ ++A+ G+S +S+++F +++G Sbjct: 3 MSTLTSKLESLLNRGKGTEQRLARFLLDSRDNFVAMNVAELAQAAGVSSASVIRFTRQMG 62 Query: 60 AQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCAL 119 +G+++ ++ + + + ++ L S+ D E I K + A+E++ L Sbjct: 63 YRGYSDFKVDYLSDEKQYKAES------LSGSLNPYDDTEQIIAKSGQMFITAIEKSLEL 116 Query: 120 LDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQA 179 LD + +I + I +A I + G+G SA+V D+ +KL+++ D HVQ + S Sbjct: 117 LDPNTMDEIAQKIVEAKRIVLFGVGTSAIVAYDIFYKLIRVNKYALFSPDLHVQLSYSSN 176 Query: 180 LKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETE 239 + D+ IAI+ G+ +I + A K+G + I +T RLA L E Sbjct: 177 VDADDLVIAITAKGNTPDINHMLKLANKKGCSTIVLTRFGQDEAVRLADLVLPYFYDEQL 236 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 +++ ++ + Q V D LF + L + + + +Q+ E +L Sbjct: 237 FQTGVITPQVLQMVVFDTLFFKYLTLTNEDVVLALQKEREAIIQL 281 >UniRef50_A1BB20 Transcriptional regulator, RpiR family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1BB20_PARDP Length = 280 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 64/270 (23%), Positives = 118/270 (43%), Gaps = 6/270 (2%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 L +I + + FT E+++A+ + S + S A+ +S+ SI++F ++L G Sbjct: 15 MLDRIRQSLASFTPAERRVAEAVLDTPSTAITWSISDAARIAKVSEPSIIRFCRRLDCDG 74 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 F + R+ L + + + A + DD L + + + A+E+ LD Sbjct: 75 FPDFRLKLAQQLAKHQPAPQPLARPGSGN---DDPLAAMVDDIFQRAGQAIEEARRDLDL 131 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 L+ + ++ KA + I G G S + + +L + +D +Q + L Sbjct: 132 GALRAAVAMLGKARRVDIYGYGSSGFMASEAQHRLAALAIPAVAYSDPTLQMHSAPLLGP 191 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVS-GETEWR 241 GD+ +S+SG ++ E ARK GA V+AI S S + LA L+ + ++ R Sbjct: 192 GDLLFVLSFSGLTSYLISNIEIARKAGAPVLAI-SPKGSIVASLADVNLNLNAYRQSSGR 250 Query: 242 SSSMSTRTAQNSV-TDLLFVGLVQLNDVES 270 + + R A V D LF + + E Sbjct: 251 MAVPTGRVAPMYVLLDALFAAMAEEMGGEH 280 >UniRef50_B9NXN7 Bifunctional protein glk n=2 Tax=Rhodobacteraceae RepID=B9NXN7_9RHOB Length = 320 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 65/284 (22%), Positives = 132/284 (46%), Gaps = 8/284 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + + N+ ++ EQK+AD+++ +++E+ S++ +A++ +S+ ++V+F + LG + Sbjct: 33 DLIPALHNSQTKLAVQEQKVADYVKDHLNEISSMTIGNLAERCSVSKPTVVRFCRSLGCE 92 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF + ++ L + S + A S ++ +++ + L L+ +D Sbjct: 93 GFRDFKLRLAQNVAVSAQYLYRNAGDESSD--ANSAIDQVLGALFA----TLDVMRGQID 146 Query: 122 YARLQKIIEVISKAPFIQITGL-GGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 RL++ + I G+ GGS+LV ++ S + ++G D++V + AL Sbjct: 147 TERLEEARDACLDRRQILFAGIGGGSSLVAQEASNRFFRLGIPSFFVNDSYVLQMRAAAL 206 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 DV +S SG IV AE A GAT I+IT ++ L ++ L T E Sbjct: 207 GLEDVLFLVSASGEADAIVSAAEVANGYGATTISITK-PNTRLSDISKIALLTELPEDSD 265 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 ++R A ++ D L + + Q E+ + ++R Sbjct: 266 IYKPTASRYAHLAIVDALAMTVAQEMTDETKENLRRIRASLTAY 309 >UniRef50_D1AK74 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AK74_SEBTE Length = 284 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 72/284 (25%), Positives = 147/284 (51%), Gaps = 9/284 (3%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 ++ K+ + ++ T++E+KIA+F+ N + ++++S ++K++ + Q+++++F++KLG Sbjct: 9 MFQVKLKSVYNDLTKSEKKIANFIMKNFEKTKTMTSYDISKKVNVGQATVIRFSKKLGYS 68 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 F EL ++ L +I+ D + K+ + ++ T L Sbjct: 69 SFNELINSI---------NKLDQEDILEKNISLGDDIATTNTKIANQYIDVIKLTLELNP 119 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 +++IE I A I + G+G SA+V D KL ++G DTH+Q ++ L Sbjct: 120 VYVFEEVIEAIIAAERIVVLGIGNSAIVSTDFVNKLARVGMNAFTNLDTHLQFSMISNLG 179 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 K D+ I IS SG +EI+ A+ A++ +I+IT T + L + F L T S + R Sbjct: 180 KNDLLILISDSGETREIIEAAKLAKQNKTRIISITKFTKNKLHAYSDFILKTASFDINLR 239 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + ++R Q ++ D++F+ +++ + + ++I S + LK Sbjct: 240 LDATTSRITQFTIIDMIFINILKTDFSKYKEIITNSDNAVKLLK 283 >UniRef50_Q02YU6 Transcriptional regulator n=4 Tax=Lactobacillales RepID=Q02YU6_LACLS Length = 273 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 76/283 (26%), Positives = 135/283 (47%), Gaps = 14/283 (4%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M T I T++E+KIA+++ A+ + + + K + + ++IV+F QKLG Sbjct: 1 MKIETVIKEKYELLTKSEKKIANYVLASKERIVYGTMNDIKKAIKVGDATIVRFCQKLGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF++L++ + E S S++ +N T L L + L +T + L Sbjct: 61 SGFSDLKIEVAKE-SYSQKSSNRTDLTLFFDENEN------------SIIEILHETKSKL 107 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D + +K ++IS+A I I G+G S +DL ++IG V + +H Q + L Sbjct: 108 DLEQFEKSSKLISEASAIYIFGVGLSGNTAKDLEAMFLRIGVPVKAISGSHFQLQTAALL 167 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 KK D+ I IS SG E+ + A++Q A +I ITS SPL +L+ L T E + Sbjct: 168 KKTDLIIGISLSGKTLELFESIKIAKEQKAQIITITSSDYSPLAQLSDINLQT-VNEEFF 226 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 S++ + +Q + ++L +L +S++ + Sbjct: 227 DGGSLTGKISQLYICEILVKNHERLYKDKSIQSREAIIRAVMD 269 >UniRef50_B5GNW3 RpiR-family transcriptional regulator n=14 Tax=Streptomyces RepID=B5GNW3_STRCL Length = 354 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 84/280 (30%), Positives = 147/280 (52%), Gaps = 4/280 (1%) Query: 5 TKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFT 64 +K+ T + Q++A+ + + + +++ +A++ G S++++V+ A+ LG G+ Sbjct: 70 SKVRTLVPSMTRSMQRVAEAVADDPAGCAALTVTGLAERTGTSEATVVRTARLLGYPGYR 129 Query: 65 ELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYAR 124 + + + + + + + + I+ DD L + KL R+++ L T A LD A Sbjct: 130 D---LRLALAGLAAHQQSGRSPSVTADISVDDPLPDVVAKLARDEQQTLADTAATLDTAA 186 Query: 125 LQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD 184 L + + A I I G+G S+LVG DL+ KL++IG D H+ T + L+ GD Sbjct: 187 LAAAVSAAATARRIDIYGVGASSLVGLDLAQKLLRIGLIAHAHTDPHLAVTNAVQLRTGD 246 Query: 185 VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTV-SGETEWRSS 243 V +AI++SGS +++ AA ++GAT IAIT D P+ + A L T S E+E R + Sbjct: 247 VAVAITHSGSTGDVIEPLRAAFERGATTIAITGRADGPVTQYADHVLTTSTSRESELRPA 306 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 +MS+RT Q V D LF+G+ Q + + S E Sbjct: 307 AMSSRTGQLLVVDCLFIGVAQRTYASAAPALAASYEALAH 346 >UniRef50_B7C842 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C842_9FIRM Length = 276 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 65/284 (22%), Positives = 125/284 (44%), Gaps = 9/284 (3%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + L I + F ++E+KIAD++ + E+ +++ +Q+A+ SQ+S+ +FA+K Sbjct: 1 MILDTIHGHYNSFFDSEKKIADYIIQHPKEVVNMTIKQLAQACNTSQASVSRFARKCQMD 60 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 F L++ L + E+ + T S + + K L T +D Sbjct: 61 SFHHLKVNLARDCVNEIEQKSNTI--------STSDISGSLETILSNKISELTATIRNID 112 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + I+ +I A + + +G + V D FK +IG Q + + L Sbjct: 113 VDQFSVILSLIQNAKHVLVCAVGNTVPVALDCMFKFNEIGILTFTSTIWENQVSYALGLD 172 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV IAIS SG +++ + +K+G I IT+ DS + + + + T + E + Sbjct: 173 SNDVVIAISNSGESSQVLAVCKEMKKRGVPTIGITNNEDSVVAKECVYHIQTSTREKLFL 232 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + +R + ++ ++L++ L S I + EL LK Sbjct: 233 NEFCFSRISAATIIEILYLFLTNA-SDNSYDRISQCEELYASLK 275 >UniRef50_C3RI81 Sugar isomerase n=1 Tax=Mollicutes bacterium D7 RepID=C3RI81_9MOLU Length = 296 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 64/286 (22%), Positives = 131/286 (45%), Gaps = 4/286 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 ML + K+ N + ++ E+ IA F+ EL S+R +A+ S +++++ +KL Sbjct: 1 MLIIEKL-NLKEKMSDGEESIAAFILTLGKELHKYSTRNIAEATLTSPATVIRLCKKLDF 59 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF + + + E + ++ + + +D++ A K++ E + T LL Sbjct: 60 KGFDDFKEQFLKEINYLDQQYGK--VDANFPFNRNDTMMKTAHKISHLYEDTVTDTMTLL 117 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + LQK + ++ + I I G + + K++KIG V + + Q + Sbjct: 118 HHDDLQKALRLLKNSNSIHIFSTGTALNLAESFKEKMLKIGKNVVISNNLNYQLYEVSCI 177 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 KGD+ I ISYSG + A+ + +IAITS ++ L +LA L + E+ + Sbjct: 178 PKGDIAIIISYSGETINTIKIAQTCKNNKIPIIAITSFGENTLAKLASCKLTISTKESLY 237 Query: 241 RS-SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + ST A + + D+L+ + ++ + ++ + L+ Sbjct: 238 HNLGDFSTHLATHLMLDILYSVFFLEDYDQNYDNKIKITKDLEALR 283 >UniRef50_B9YAK0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAK0_9FIRM Length = 364 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 54/283 (19%), Positives = 122/283 (43%), Gaps = 3/283 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M + ++ S T E+ I +++ + +E+ ++ +A++ S+S+I +F +K G Sbjct: 81 MSFFLELQKNHSS-TPVEKSIINYIINHPNEVIEMTMEDLARETYTSRSTISRFCKKNGY 139 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF L+M L E + + +++ L D+ I + + ++ +T Sbjct: 140 EGFNSLKMQLAIELNLFLKDEMSSSTSL--LFEKGDNASSIIDNITSQDTYSIIETVRTN 197 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 ++K+ + I + G+ S ++ D + ++G T S Sbjct: 198 PVEHIEKLADKILNCRHVVFLGVQFSGIIAYDAHLRFSRLGIPCKYFNTECDILTYSYFA 257 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 DV I SYSG I+ A+ R +G + ++T ++ L ++ L S + Sbjct: 258 DPQDVVIIFSYSGKTAVILEAADHIRGKGTFLASVTKNYNNELLEISDLHLYINSIDDPE 317 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 + S+S+R A + D+++ LV + ++++L ++ Sbjct: 318 NNLSLSSRIAALCLVDMIYAVLVNKKSDNFYDKLMQTNKLYKK 360 >UniRef50_C3RHA3 Transcriptional regulator n=3 Tax=Bacteria RepID=C3RHA3_9MOLU Length = 288 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 70/278 (25%), Positives = 137/278 (49%), Gaps = 5/278 (1%) Query: 6 KISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTE 65 +I + +E+K+AD++ +L+ +S +AK++ +SQ ++++F + +G F + Sbjct: 8 RIKTIYNILRPSEKKVADYILNYCGKLEDLSMTLLAKEVAVSQPTVMRFVKAIGYDSFKQ 67 Query: 66 LRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARL 125 ++ L Y +K N + SI +DD + + K+ LE L Sbjct: 68 FKLELAKNY----DKENNIDILYGFSINTDDKIMDLPGKIVATATSMLENALKSLSLVNY 123 Query: 126 QKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDV 185 QK + +I+++ I I + S V DL KL+ +G V C +D ++Q+ + L + + Sbjct: 124 QKTVALINQSQHISIYAVENSMGVAHDLMTKLIYLGKSVTCHSDYYLQSIDASNLTRDSL 183 Query: 186 QIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSM 245 I ISYSG+ K V + A+ GA IAI + ++ L R L T + + + ++ Sbjct: 184 AIGISYSGNSKNTVEVLKIAKDAGAQTIAIVNFENTMLTRYGDIVLSTSNDQFLY-GDAI 242 Query: 246 STRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 +RTAQ ++ D++++G++ + K + S L + Sbjct: 243 FSRTAQIALVDMIYMGVIISDYDNYTKKLDHYSRLIKH 280 >UniRef50_A9MLD6 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- RepID=A9MLD6_SALAR Length = 293 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 69/265 (26%), Positives = 120/265 (45%), Gaps = 4/265 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 ++N E + KIA ++ + +++A+++G+S+++IV+F +K+G Sbjct: 7 NVRVYLANILGSLGETDAKIAGYILQQPGLVVQFPVKKLAQEIGVSEATIVRFCKKVGYG 66 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G L+ L E A N +L I DDS +A+K+ E + +T LLD Sbjct: 67 GLLNLKADLKRELLA----ENDLSLPSSPDIFLDDSRNDVAQKIALTIETSARETIGLLD 122 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 ++ ++E A + G G S L + K+ ++G D LK Sbjct: 123 MKIVKPVVERFLSARRVMFVGFGASGLAALEARDKMNRLGIDSDAFTDRFTMTLKLANLK 182 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 + D+ +A S+SG E+V A+K+GA +AIT SPL LA+ T + Sbjct: 183 RDDLVVAFSHSGETPEVVNAFRLAQKKGAYTLAITHSPHSPLNELANTFWLTSGEAGPMQ 242 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLN 266 S+STR +Q + + L + + N Sbjct: 243 GDSISTRISQLFIIEFLCTEITRHN 267 >UniRef50_Q5WK55 RpiR family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WK55_BACSK Length = 268 Score = 229 bits (586), Expect = 6e-59, Method: Composition-based stats. Identities = 64/283 (22%), Positives = 130/283 (45%), Gaps = 20/283 (7%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 L +I + E++IAD++ + EL ++ + +A + +S ++I +F +K+GA Sbjct: 4 MLQQIQVNYHALSAAEKRIADYVMSAPEELANIHIKDLAAKCSVSVATITRFCRKVGAAN 63 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 F E +M++ E + ++ + + + L++ Sbjct: 64 FVEFKMSVRDSIRTEEEGG------------------ELIAEMESIYKAIIGGSRELINQ 105 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 + + ++ A I+I G+G S L G+++ F+LM++G RV C D+H + L Sbjct: 106 DDIVQAATLLENANRIEIYGIGSSGLSGQEMKFRLMRMGMRVDCHIDSHTMVMNASLLTA 165 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 DV +AIS SG +I A++ GATVI +T+ +PL +A L + S + + Sbjct: 166 ADVVLAISNSGHTVDIQEAVALAKENGATVILLTNHEHTPLSEMADLLLLSFSPKPFYAR 225 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 ++ + + V D L ++ N+ + +++ +LK Sbjct: 226 GFLNAQLSIVHVLD-LISLVLAQNEERAKAR-RKTLHALSQLK 266 >UniRef50_C0X6G8 RpiR family transcriptional regulator n=23 Tax=Enterococcus RepID=C0X6G8_ENTFA Length = 283 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 71/286 (24%), Positives = 142/286 (49%), Gaps = 6/286 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M + I +F++ ++IAD++ + + L S+++ ++A S +S+ +F+++LG Sbjct: 1 MEPIRSIRQKYKDFSKVNKRIADYILKDPTRLLSLTANEIASNSETSPASVTRFSKQLGF 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 + EL++++ + + + + +DDS++ I K+ +E + Sbjct: 61 DSWEELKLSIAA-----VQAASNGKKDIDPIVAADDSVDTICMKVESLLNATIEDLFYTV 115 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D L++ I + KA I + G+G S+L +L K + G + D+H+ Sbjct: 116 DKQALERAIAHVKKAEKIHLVGIGASSLTTYNLYHKFNRAGRQAIFNYDSHMMLEFLNYA 175 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 D+ I +SYSG KE ++ E A+ +GATVI ITS +R L+ L + E Sbjct: 176 TAQDILITVSYSGLTKEALIACEIAKNRGATVIFITSNDGENVRSLSDEVLLVPNNEHLI 235 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDV-ESLKMIQRSSELTQRLK 285 R ++S+ + ++ D+L++G +Q + E + + +S+L RLK Sbjct: 236 RVGAISSIASSMAIGDVLYLGSIQDDLDTEIERNMIETSQLVSRLK 281 >UniRef50_Q28KP3 Transcriptional regulator, RpiR family n=6 Tax=Alphaproteobacteria RepID=Q28KP3_JANSC Length = 306 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 88/250 (35%), Positives = 143/250 (57%), Gaps = 4/250 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 LT + + +++IAD + + + +SS ++A+ G SQSS+VKF QKLG Sbjct: 27 SILTIMQAQLPTLSAGDRQIADTILGDPDRMARLSSGELARAAGRSQSSVVKFCQKLGFS 86 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ +LR+A+ + + +A +HSSI D + A+KL K AL++T ++ Sbjct: 87 GYQDLRLAVTRAAATQKAPNDA----VHSSIEVSDDASMTAQKLLASKIHALQETLSINP 142 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L + ++ A +Q++G+G S+LV RD +KL K+G V +AD+H+Q S L Sbjct: 143 AKNLDAARDALNGAARVQLSGVGASSLVARDFVYKLQKLGISVLFDADSHIQMAHSATLT 202 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV +++S SG E + AEAA K+GAT+I +T L +PL +A L TV+ E + R Sbjct: 203 PDDVLVSLSQSGFSLETLRIAEAAAKRGATIITVTGLHPNPLADVADKALCTVTDEDQVR 262 Query: 242 SSSMSTRTAQ 251 SS++++R AQ Sbjct: 263 SSAITSRDAQ 272 >UniRef50_C3RM35 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RM35_9MOLU Length = 284 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 60/273 (21%), Positives = 131/273 (47%), Gaps = 3/273 (1%) Query: 12 SEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALI 71 + F+ E+ + ++ N ++ ++S++++AK S +SIV+F +KL +G+ + ++AL Sbjct: 3 NNFSSVERILGKYVLENGEKVLNMSTKELAKATFTSPASIVRFCRKLEYEGYNDFKIALA 62 Query: 72 GEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEV 131 + SR + ++ + DS+ +A + + +++ T LD L+ ++ + Sbjct: 63 AQLQYSRLSNDD--INANYPFKGTDSVYTVASNIANLSKESIDITMKNLDLEELRLVVLM 120 Query: 132 ISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISY 191 I+KA I I G+ G + D +K+ +IG V + Q + + I ISY Sbjct: 121 ITKAKVIDIYGVSGPLRIASDFQYKMFRIGKDVRISQMINEQLFQAAQSTSEHLAILISY 180 Query: 192 SGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW-RSSSMSTRTA 250 SG +E++ A+ ++ IAITS ++ L + L S E + + ++ S+ + Sbjct: 181 SGETEEVIEAAKILYRRKIPAIAITSFGENRLVKYTQRVLYLNSSEFIYSKIATFSSTLS 240 Query: 251 QNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 + + D+++ + N ++L + L Sbjct: 241 LHLLLDIIYGCVFSKNYEDNLNYKIETDNLIDH 273 >UniRef50_D0RS60 RpiR family transcriptional regulator n=2 Tax=Lactobacillales RepID=D0RS60_9STRE Length = 277 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 57/284 (20%), Positives = 119/284 (41%), Gaps = 17/284 (5%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L I + T E+KIAD+ + + +S++ ++++L +S S+ +FA+K G Sbjct: 4 NILPVIESVYGSLTHLEKKIADYFLSAEALTADLSAQAVSQRLYVSVPSLTRFAKKCGFS 63 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ + S S+ + + R + + L +T +L+D Sbjct: 64 GYRQFIFEFQESSSESKNVSR-----------------DLTRNVLSDYGELLNKTFSLID 106 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + ++ ++++ A + I G G S LV R++ F+ M++G D H+ L Sbjct: 107 EEQFLRVGDMLNNAGRVYIYGQGSSGLVAREMEFRFMRLGMVCKAITDDHMIRMNRVMLN 166 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 + I IS SG K I + A+K GA + +TS LR+ + + + Sbjct: 167 PDCLVIGISISGETKIITQAIQNAKKVGAKTVLVTSNNSDDLRQQCDELVLVAVKKHLAQ 226 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +++S + V D+ + + L+ ++ + + + Sbjct: 227 GNNISPQFPVLVVMDIFYAYYMDLDRDHRSQIFTNTLSALEENQ 270 >UniRef50_A3DDB2 Transcriptional regulator, RpiR family n=5 Tax=Clostridiales RepID=A3DDB2_CLOTH Length = 299 Score = 227 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 64/286 (22%), Positives = 121/286 (42%), Gaps = 11/286 (3%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L +I F++ ++ IA+F+ + + +++ ++ +++G+S+S++V+FA ++G Sbjct: 8 DLLKRIQAGMPGFSKGQKLIANFIINHYDKAAYMTAAKLGEEVGVSESTVVRFANEIGFD 67 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ +L+ L K+ TA+ +S + I + + + ++ T +D Sbjct: 68 GYPKLQKVLRE-----MNKSKLTAVQRIEVTSSRINEGNILKSVLQSDMEKIKATLEEID 122 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACE--ADTHVQATVSQA 179 I++ I A I I G+ SA + L F I V Sbjct: 123 QESFNNIVKSILNARKIYILGVRSSAPLASFLGFYFNLIFDNVRLVHTTSVSEMFEQIIH 182 Query: 180 LKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETE 239 +GDV I IS+ K + A+ QGATV+AIT SPL + A + S Sbjct: 183 ASRGDVVIGISFPRYSKRTINAMRFAQNQGATVVAITDSLYSPLAKNADHVITARSD--- 239 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +S + + A SV + L V + + +R ++ K Sbjct: 240 -MASFVDSLVAPLSVINALIVAIGMSRKPHVQETFERLEKIWDEYK 284 >UniRef50_B7CB00 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CB00_9FIRM Length = 291 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 72/287 (25%), Positives = 137/287 (47%), Gaps = 7/287 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + + +I EFT+ E+ IAD+L N E++++S +A+ S S+I +F KLG Sbjct: 1 MIIERIIKQ-EEFTDVEKSIADYLLKNGYEVKNMSISSLAQVTYSSTSTITRFCHKLGLD 59 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ + ++ EY A +K ++++ T +DS E IA++L R + + +T + + Sbjct: 60 GYKKFQILFNSEYEAYEKKG---LVNVNYPFTGEDSYEQIAKQLERLNQETIAKTISCFN 116 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 Y +L +I+ + KA I I +G S V + K+++ G V + A Sbjct: 117 YNQLNRIVRRMDKADMINIFSVGTSVTVAMEFQQKMLRFGKIVNLTQQACFLPGYALAGT 176 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGET--- 238 + V + IS SG +++V ++QG + +TS +S + R + E Sbjct: 177 ENTVNLVISLSGENRDVVESLNLLKEQGRYTVGMTSTPNSTVARECKEVILVDIEENNSY 236 Query: 239 EWRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 E + + + +A + V D LF L + N + K+ + + + +R K Sbjct: 237 EAKIDTFAIYSAFHFVLDCLFSFLYKYNFDSNTKITKEKAYMIERNK 283 >UniRef50_C8P0W4 RpiR family phosphosugar-binding transcriptional regulator n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P0W4_ERYRH Length = 285 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 59/284 (20%), Positives = 130/284 (45%), Gaps = 4/284 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 ML + +I N+ ++ ++ E KIA ++ N + ++ ++++ S S+I +F +K+ Sbjct: 1 MLLINRIKNS-TQLSDTESKIAQYILENPQLVTQLTIHELSEITYASASTITRFCRKMKT 59 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF++ ++ L GE S+ N + S+ + I + + ++ T + Sbjct: 60 EGFSDFKVKLAGELSSFSITENRIRDDV--PFQSNHTSTEIVQSILSLNYQSMSDTYNNI 117 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D +L++I I AP I + G G S ++ +D +KL +I E Q+ + Sbjct: 118 DLEQLERIAHKIYYAPHIYLYGSGQSLILAQDFQYKLFRIELDCNLETSLGFQSLKANTQ 177 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + + ISY G + ++ ++ I IT ++PL A + E Sbjct: 178 PLDSIALIISYYGQNEHNKTIVDSLVERNIPYILITGPLNNPLCTHASEVVHVSPQEELV 237 Query: 241 -RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 + +S S+RT+ V D ++ + ++ ++ K+I++ ++ Sbjct: 238 TKMASFSSRTSMQLVLDFIYALIFAIDYEKNQKIIEKHPWYIKK 281 >UniRef50_P0ACS8 HTH-type transcriptional regulator rpiR n=34 Tax=Gammaproteobacteria RepID=RPIR_ECOL6 Length = 296 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 66/278 (23%), Positives = 132/278 (47%), Gaps = 7/278 (2%) Query: 7 ISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTEL 66 + TENE +I ++L + + + + +A+ L +S++ IVK ++ LG GF L Sbjct: 20 LRMKQEGMTENESRIVEWLLKPGNLSCAPAIKDVAEALAVSEAMIVKVSKLLGFSGFRNL 79 Query: 67 RMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQ 126 R AL + + + L S + D++ + + K+ + + ++++ + Sbjct: 80 RSAL-------EDYFSQSEQVLPSELAFDEAPQDVVNKVFNITLRTIMEGQSIVNVDEIH 132 Query: 127 KIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQ 186 + +A + G GGS + D+ K ++IG R D H+ + L++GDV Sbjct: 133 RAARFFYQARQRDLYGAGGSNAICADVQHKFLRIGVRCQAYPDAHIMMMSASLLQEGDVV 192 Query: 187 IAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMS 246 + +++SG ++ E A+K GA +I IT SP+ +LA + + + + ET + S Sbjct: 193 LVVTHSGRTSDVKAAVELAKKNGAKIICITHSYHSPIAKLADYIICSPAPETPLLGRNAS 252 Query: 247 TRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 R Q ++ D FV + QLN ++ +Q++ + Sbjct: 253 ARILQLTLLDAFFVSVAQLNIEQANINMQKTGAIVDFF 290 >UniRef50_Q71VW8 Phosphosugar-binding transcriptional regulator, RpiR family n=15 Tax=Firmicutes RepID=Q71VW8_LISMF Length = 268 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 54/283 (19%), Positives = 129/283 (45%), Gaps = 18/283 (6%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L +I + E++IA ++ EL++++ +++A++ G S S+I +F + + Sbjct: 1 MTILNEIQQNYNRLPNKEKQIAKYILEKSDELKNINIKELAEETGTSISTITRFCRHVRC 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 F +L+M ++ +++ + + ++ ++ T L+ Sbjct: 61 DSFVDLKMR----------------VNTAATMVPSLGYDDLFEEVYSFYHKVIDNTVKLI 104 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + A+++++++ I +A + I G+G S L ++S +L+++G V D H+ S Sbjct: 105 EPAKIREVVQYIQEAKRVYICGVGSSGLTAVEMSQRLIRMGLNVISVNDPHMMIITSSIT 164 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 K D I IS SG+ E+V + A+K + V TS +S + ++ T+ + Sbjct: 165 TKEDFVIGISNSGNTPELVTALKIAKKNKSKVATFTSFENSEMTEISDVTIPVYNTLFVS 224 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 + +++ + V D++ + L+Q ++++ Sbjct: 225 KRYFANSQFSIMYVMDIISMMLLQN--ESYRDNMEKTINTVTD 265 >UniRef50_UPI00016A71F3 transcriptional regulator, RpiR family protein n=1 Tax=Burkholderia oklahomensis EO147 RepID=UPI00016A71F3 Length = 300 Score = 226 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 111/282 (39%), Gaps = 9/282 (3%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + I + ++ +A ++A G+S+ ++V+F + LG Sbjct: 11 DLFSLIHARLPDLAAAQRLVAKVFLDKPEWAMQAHVNEIAVFAGVSEPTVVRFCRALGFH 70 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G + ++ + + + ++ LH ++T+ DS++ I K+ R L L Sbjct: 71 GLRDFKLRVAQQVALG-------SVALHRNVTAVDSIDEIVGKVLRSSADILLDIERQLP 123 Query: 122 YARLQKIIEVISKAPFIQITGLG-GSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 ++++ I + A + G+G S V D +L + G + D ++Q + L Sbjct: 124 REQIKRAISALGSAHRVDCYGVGTTSGFVAADAQARLFRFGIQAQTYTDANMQMFSAATL 183 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 GD IA+S+ G ++ AR++GA VI I +PL L + Sbjct: 184 SPGDGVIAVSHFGRMPFLLEAVRVARERGAVVIGICE-PGTPLAGECDIPLTFALPASVN 242 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 A ++ D+L VG+ ++ ++R + Sbjct: 243 AYIGSDACIAHLAIIDILIVGVAFERGAAGIEQLRRLQNVLS 284 >UniRef50_A8UCF8 Phosphosugar-binding transcriptional regulator, RpiR family protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UCF8_9LACT Length = 283 Score = 226 bits (577), Expect = 7e-58, Method: Composition-based stats. Identities = 63/284 (22%), Positives = 133/284 (46%), Gaps = 7/284 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L +I + + +E+KI +++ E +++ Q+ + +++++ ++G Sbjct: 5 NILGRIKSVLDDLPNSERKIGEYILTYPEETIKMTTSQLGIAAESNSTAVIRLCNRIGVN 64 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GFT+L++ L E + E ++ I +++++ I KL ++E+T +L++ Sbjct: 65 GFTKLKVNLSAEIVSVDESG-------YAEIEAEETIGTIKNKLLTNAFKSMEETISLMN 117 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 ++++IE+I A + + G+G S ++ ++ K ++G V C D H ++ A Sbjct: 118 EFDIERVIELIESASMVYVYGVGNSRIIAENMVQKWSRVGKIVICPTDNHQLVSMLGAAP 177 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 K + IS SG +EI+ + A+K + +T + L A +T+ TV Sbjct: 178 KNALFFGISNSGETREIIELIKLAKKCSLKTVGLTQFGQNSLTNKADYTIQTVKTIESDS 237 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S+ AQ D+LF + N V + I++S E + K Sbjct: 238 QFISSSLHAQLIAIDVLFYSFLSKNYVAGTERIKQSREEMNQYK 281 >UniRef50_D2BPE4 Transcriptional regulator, RpiR family n=1 Tax=Lactococcus lactis subsp. lactis KF147 RepID=D2BPE4_LACLK Length = 273 Score = 226 bits (576), Expect = 9e-58, Method: Composition-based stats. Identities = 70/285 (24%), Positives = 134/285 (47%), Gaps = 13/285 (4%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L +I F E+E+KIA+F+ N ++ + +A+ +S++SI +F +KL Sbjct: 1 MNILDQIQVNFQNFFESEKKIAEFILKNPKKVIDMPIALLARNSNVSEASISRFCKKLNL 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF +L++ L + + + + SL + + +++ K L L Sbjct: 61 TGFHQLKIELAR-----------IQDNENIKVNKNTSLNELIKNISKIKTTELIAATDNL 109 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D LQ II++I+ G + V D S++ ++G D VQ + + Sbjct: 110 DIDNLQSIIKIITNVKLTHFVASGNTIPVAEDASYRFNQLGITSVVFDDWQVQTAFTLNM 169 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 +K D+ I IS SG K ++ A+++ +I+IT+ DSP+ RL++F L + S + + Sbjct: 170 RKEDLLIVISNSGESKSLIKLINIAKEKKIPIISITNHPDSPIARLSNFHLTSFSRDYFF 229 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + +R + + +L+F+ L Q D L+ I+ ++ K Sbjct: 230 HNDYYFSRLSAMYLIELIFLILSQ--DKSRLENIKLHEQIISEAK 272 >UniRef50_B7RLA4 Transcriptional regulator, RpiR family n=1 Tax=Roseobacter sp. GAI101 RepID=B7RLA4_9RHOB Length = 317 Score = 226 bits (576), Expect = 9e-58, Method: Composition-based stats. Identities = 55/284 (19%), Positives = 118/284 (41%), Gaps = 8/284 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 ++ + EQK+A++++A++ ++ +++ ++A +S ++++F + LG Sbjct: 30 DVISALRRHDGHLATQEQKVANYVKAHLEDISAMTIAELAGHCDVSTPTVIRFCRTLGCD 89 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF E ++ L + S + +A D ++ I + + +D Sbjct: 90 GFREFKLRLAQNLAVSMQYLSADPQP--EPADGDTAINQILGGIYASANV----MRRQID 143 Query: 122 YARLQKIIEVISKAPFIQITGL-GGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 L + + K + G+ GGS+ V ++ + + ++G +D+++ + L Sbjct: 144 PEVLDRAKSALLKTRHLLFAGIGGGSSNVSQEAANRFFRLGIPSFSTSDSYILQMRAATL 203 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + GDV IS SG IV AE A GAT I IT + L + + + E Sbjct: 204 QAGDVLFLISASGEADAIVGAAEIAGGYGATTICITKSG-TRLANVCNIPILIDLPEDRD 262 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 ++R + D L + + Q E+ + ++R Sbjct: 263 IHKPTASRYIHMIIVDALAMSVAQDLAHETTENLRRIRASLTAY 306 >UniRef50_C2KD15 RpiR family transcriptional regulator n=3 Tax=Lactobacillus crispatus RepID=C2KD15_9LACO Length = 279 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 72/277 (25%), Positives = 140/277 (50%), Gaps = 12/277 (4%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M +LT + N + + E+KIA F+ + +QS + Q+A + +S ++I +FA+++ Sbjct: 1 MTFLTDLQNRLPDLPQQERKIALFILQDPQFIQSANINQLASTIKVSNATITRFARRVNC 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 FT+L++ L ++S+ T IT+ D+ + A ++ L +T L Sbjct: 61 SSFTDLKVKLAAAAASSQVNT----------ITNQDNSKTTAHQVYDFYNRVLSETQNKL 110 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D +L+KII++I A + G+G S + + +L+++G E +++ S + Sbjct: 111 DIKQLKKIIQLIKSAKRVYFYGIGSSGYTSLEATQRLLRMGISAFAETESNNMFMTSSII 170 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 K D+ IAIS +GS +V E A+K ATV+A+TS +SPL +LA + Sbjct: 171 SKDDLIIAISSTGSTDSLVRAIELAKKNKATVVALTSYDNSPLAQLADIVVGVQDTNYIN 230 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRS 277 + ++++ + V D++ L++ N + + R+ Sbjct: 231 DARFINSQFSIMYVIDVITTLLLKNN--KYHDRMTRT 265 >UniRef50_Q03HW7 Transcriptional regulator n=13 Tax=Lactobacillales RepID=Q03HW7_PEDPA Length = 295 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 67/284 (23%), Positives = 135/284 (47%), Gaps = 4/284 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 ML + K+SN FT EQ+IAD++ N++++ ++ +++K S S++V+ +KLG Sbjct: 1 MLLIDKLSNH-ENFTNTEQRIADYILKNITDIPPMNIDKLSKVTYTSHSAVVRLTKKLGF 59 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF + ++A+ + + TN ++ + S+DS+ I++K+ ++++T A L Sbjct: 60 EGFKDFKVAISE--AVYSQTTNMNSVDANFPFDSNDSVSTISKKVAELSVESIQRTFAQL 117 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D +++ I+K+ I + G S + R KL+K+ + + + L Sbjct: 118 DERLIEEAANTIAKSERIFLFAQGDSQIRARSFQNKLVKLNRFAILGEEYSDEDWTAANL 177 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 K D I ISY G + + + +T SPL RLA + T E ++ Sbjct: 178 TKKDCAIFISYGGRISQYERMLTHFSENKIPSVVLTGNQKSPLIRLAQTAIVTTQNEYDF 237 Query: 241 -RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 + S+ S++ + D +F + +++ ++ L QR Sbjct: 238 LKISTFSSQITFEYLLDTIFSVIYAKEYQQNIINLKNKFNLIQR 281 >UniRef50_C7HWK5 RpiR family phosphosugar-binding transcriptional regulator n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HWK5_9FIRM Length = 297 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 65/283 (22%), Positives = 135/283 (47%), Gaps = 3/283 (1%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 I + S FT+ E A++ E+ + + +A++ S +SI KF +KLG +G Sbjct: 17 LERIILSKKSTFTKTENFYAEYFLKLDDEILNKTISNVAEETESSTASIFKFIKKLGFKG 76 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 + + ++ L + ++ + L +S+ +DS + IA K+ ++ + Sbjct: 77 YKDFQLNLATNI---NKNSDDSLLTAITSVNENDSPDEIANKIMAFNIQSMYTLKEDIKN 133 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 + + +I K+ I G+GGSA + D K ++ Y V +D+H+Q + + + Sbjct: 134 IPFESCLNLIKKSKKIHFFGMGGSATIAYDSYHKFLRTKYMVNYISDSHMQLSACTKMDQ 193 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 D S+SG E++ ++ A+K A +IA+T S + +++ + S E+E + Sbjct: 194 NDCIFVFSHSGRTLEVIEVSKVAKKNKAKIIALTGNPKSEMVKISDEAMILPSIESEHGT 253 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S++ R +V D+L + L+ N E+ K +++ + + K Sbjct: 254 ESLNARILYLTVMDILLISLMYDNVEENKKYMKKRLDALKVTK 296 >UniRef50_C2C459 RpiR family transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C459_LISGR Length = 284 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 62/285 (21%), Positives = 133/285 (46%), Gaps = 5/285 (1%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + L KI + FT E+ IAD++ AN + ++ ++ +++A++ S +SI++F +KLG Sbjct: 1 MLLQKIKT-MTNFTNTEKVIADYILANTANMEQLTIQELARKTYTSHASIIRFTRKLGLD 59 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF ++ L+ + +E + ++ + DDS+ I+R++ + + ++ LLD Sbjct: 60 GFKSFKIELLK--TNQQENHVLSEINPNIPFEHDDSILKISREMMELTQQTITESYHLLD 117 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 +L + + A I + LG S + KL KI D A + + Sbjct: 118 EQKLFQATRQLYDAKRIFLFALGDSQIRAESFQNKLWKINQYAILATDRSEWAVHTANIT 177 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGE--TE 239 D + ISY + AE + +G +I +TS S L ++A + + E +E Sbjct: 178 SEDCALFISYDAKSPHDITAAEWLKSRGVPIILLTSHITSKLSKIADICIAVPNLEDKSE 237 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 + ++ +++ A + + +++F L Q++ ++ + + Sbjct: 238 LKIATFASQIAFDYILNVIFSTLYQIDYEKNKDYQTLNQQFLSDN 282 >UniRef50_C6VMT8 Transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VMT8_LACPJ Length = 282 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 74/288 (25%), Positives = 127/288 (44%), Gaps = 15/288 (5%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKL--- 58 L I N F++ EQKI ++ + + + +S+ ++A G+S +++ +F + L Sbjct: 3 SVLFTIHNRLENFSKAEQKIGRYILDHTNAVIKMSTAELAAATGVSTATVARFGKTLIPD 62 Query: 59 GAQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCA 118 G G+ L++ L E + L+ I DSL+ I KL +++T Sbjct: 63 G--GYPALKLRLSAE--------STVDQTLYDEINPKDSLDAIKSKLALRITHTIDETNR 112 Query: 119 LLDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQ 178 LD A LQ ++I+ + + GLG S +V D K ++IG V D H+ A Sbjct: 113 SLDDAALQAASQLIADKASVYVYGLGASNVVATDFEQKFIRIGKAVIHSQDPHLLAVGMT 172 Query: 179 ALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGE- 237 ++ V + IS SG K E + A A VI ++ S L +LA L E Sbjct: 173 TQRQNVVLLLISNSGEKSESIRLANLAHSINVPVIVLSRNATSTLGKLADIILINDDSEE 232 Query: 238 -TEWRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 R+++ ++ AQ V DLL+ + + +K + S E + Sbjct: 233 NQTARAAATTSLMAQLYVVDLLYYTFITNDYERHIKQLVASREAIKEN 280 >UniRef50_A9BEU1 Transcriptional regulator, RpiR family n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEU1_PETMO Length = 269 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 57/283 (20%), Positives = 124/283 (43%), Gaps = 15/283 (5%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + +KI + T E++ A ++ ++ S +++ G S+++I + +K+G Sbjct: 1 MVTSKIKGIYNSLTNKEKQAAQYIIERPGDVIHYSITELSNWAGTSETTIYRVLKKVGYS 60 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ + ++ L E S + + + + + AL +D Sbjct: 61 GYQKFKLELARELSTPTLDSKES--------------KDLFDMIYNRTVNALTDILRQVD 106 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 ++ E+I + + +G S + D S K +G+ +D H+Q V+ L+ Sbjct: 107 RDKITHASEIIMNSKKLLFYAVGRSFPIALDASLKFAALGFASTAYSDPHMQVIVASNLE 166 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 K DV IAIS+SG ++ A+ A++ GA I +T+ +SPL ++ + L T + E Sbjct: 167 KDDVVIAISHSGVIRDTYKSAQVAKEAGAFTIGMTAGVNSPLSKIVNLVLYTSA-EMPQE 225 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 S +R + + +LL+ + +++ + + T++ Sbjct: 226 SEFTVSRIGEMFMVELLYNSVASKMSLKNKESRISQAMKTKKF 268 >UniRef50_C0C5Q9 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C5Q9_9CLOT Length = 287 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 77/283 (27%), Positives = 132/283 (46%), Gaps = 8/283 (2%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGI-SQSSIVKFAQKLGAQG 62 L KIS + T+ ++++AD++ N SE+ + S + + S++S+VKF + LG G Sbjct: 11 LAKISELYPQLTKGQKQLADYILKNPSEVVNKSITDLISHTSLKSEASVVKFYRLLGFDG 70 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 F ++ L E N T H S IT DD I +K+ +L + + Sbjct: 71 FKSFKIKLAQEL------VNRTFYHSESDITIDDEPTEIKKKVFLGAMSSLSKNADIAAG 124 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 + +++S A I I G G SA + + F+L ++G C D H+ A + + Sbjct: 125 ECMD-AQKLLSSAKRIIILGHGASASICQYAFFRLTELGLNCVCNQDAHMNAAILTHPRP 183 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 GDV + +S SG ++ E A ++ I IT S + RL+ L TVS E + Sbjct: 184 GDVILCVSQSGETADLYKQIEMAYQRRIPAILITGAPGSSIARLSQVILSTVSEERNILT 243 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 ++++R +Q + D LF + N E L +Q + ++ K Sbjct: 244 DALNSRVSQFCLIDALFSMISIANANEMLPRLQDTRNTFKKYK 286 >UniRef50_C4FU45 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FU45_9FIRM Length = 277 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 66/287 (22%), Positives = 133/287 (46%), Gaps = 20/287 (6%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L +I + EQ +A ++ +++ +MAK+ G+S ++I +F +K+G Sbjct: 1 MGVLERIEANFVHLSPKEQLLATYIMQESPYFTNITISEMAKETGVSAATITRFCRKVGC 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 + F +L++ L S+ + ++ +++T L Sbjct: 61 ESFVDLKIQLQAS---------------EGESASNHQNHDMFDTVSEFYNRIIQRTSELQ 105 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 +L+++I+V+S+A I + G+G S L R+L+ +L ++G E D+H+ S Sbjct: 106 SEYQLRQLIQVLSQANRIMVYGMGSSGLTARELAIRLSRMGLPATSETDSHMMIISSTVT 165 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + DV IAIS SG K+++ A++ GA ++AITS+ S L +LA TL + Sbjct: 166 RSSDVVIAISNSGETKDVIDALGNAKQNGAILVAITSMKGSSLAKLADETLLVHNSRFVN 225 Query: 241 RSSSMSTRTAQNSVTDLLFVG-----LVQLNDVESLKMIQRSSELTQ 282 ++T+ + D + + + N ++++ I ++ Q Sbjct: 226 SEFFVNTQLPIFFLIDAITLMMLENPVFSQNMQKTIQEITSINQKLQ 272 >UniRef50_C7XVK6 6-phospho 3-hexuloisomerase n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XVK6_9LACO Length = 280 Score = 223 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 127/282 (45%), Gaps = 17/282 (6%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 + ++ N E+K+A ++ ++ ++A Q G+ +++ +F +++G + F Sbjct: 1 MEQVQNLFINLPRQEKKVARVTLQKPELVRRMNITELANQAGVGVATVSRFTKRVGCKNF 60 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 + ++AL+ + RE + ++ + L +T A++ Sbjct: 61 ADFKLALVTPDTMQRESEQNVSTP---------------NDIHNYYQKILAETMAMVSTK 105 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 +L++ +I A + + G+G S ++ + +LM++G ++++ S ++ Sbjct: 106 QLRQAANLIHGAKRVYVFGIGSSGYNAQEFAQRLMRMGKPAFAMTESNMMTIASATMQDN 165 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 D+ IA+S SGS E+ +RK GAT+IA+T+ +S L +++ S E Sbjct: 166 DIVIALSVSGSTPEVCSAVRDSRKNGATIIAVTAFKNSLLGKMSDLLFQIKSTELVGDYD 225 Query: 244 SMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 ++++ A V D+L L+Q + + ++ E K Sbjct: 226 FINSQFAVTYVIDMLTQMLLQ--FTDFRATMNKTVEAILVTK 265 >UniRef50_B7X566 Transcriptional regulator, RpiR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X566_COMTE Length = 282 Score = 223 bits (570), Expect = 5e-57, Method: Composition-based stats. Identities = 64/288 (22%), Positives = 127/288 (44%), Gaps = 13/288 (4%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 L ++ T E+++ + N S+S+ ++A + +SQ ++V+F + LG G Sbjct: 1 MLDQVMATLETLTPAEKRVGKLVIENPRRFASMSTSEIASECFVSQPTVVRFCKGLGYGG 60 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 T+ + L G+ + ++HSS+ + D+ +A K+ L + Sbjct: 61 LTQFKQKLRGD-------RSDGVPYVHSSVDAGDTSFNVALKVVDSSIATLALFRTYVPK 113 Query: 123 ARLQKIIEVISKA----PFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQ 178 +++ ++ A + G G S +V +D + ++G+ D + Q + Sbjct: 114 ISIERASNTLAAAYSEQRSLSFYGSGHSGVVAQDAQLRFSRLGFNSTALNDGYSQVLNAA 173 Query: 179 ALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGET 238 + K+GDV +A+S SG KE++ + A++QGATVIA+T +PL + L T E Sbjct: 174 SRKEGDVVVALSCSGRTKELLESVDVAKRQGATVIAVTGSG-TPLATMGSIHLATDHLED 232 Query: 239 EWRSSSMSTRTAQNSVTDLLFVGLVQLND-VESLKMIQRSSELTQRLK 285 R MS+R V D++ + ++R+ + + Sbjct: 233 IDRYLPMSSRLLHLVVIDIVATAVALQIGCGRLQDQLERTQNHLRHRR 280 >UniRef50_C6B6F5 Transcriptional regulator, RpiR family n=7 Tax=Alphaproteobacteria RepID=C6B6F5_RHILS Length = 287 Score = 223 bits (569), Expect = 6e-57, Method: Composition-based stats. Identities = 61/280 (21%), Positives = 124/280 (44%), Gaps = 10/280 (3%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M + + + +E +IA+ + + + S ++A++ +S ++ +F ++LG Sbjct: 1 MDIFSTLQEDKGRLSPSESRIAEIIVNDFEFAVNASIIELAERAKVSPPTVTRFCRRLGC 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 + F++ ++ L T + + +A+ + + + AL L Sbjct: 61 ESFSDFKVQLAR--------TAHIGVRYLKPESKSTDPADVAQDIITKAQNALFLLHRSL 112 Query: 121 DYARLQKIIEVISKAPFIQITGLGG-SALVGRDLSFKLMKIGYRVACEADTHVQATVSQA 179 D A ++ + I+KA I G GG S+++ +L +L ++G R+ +D +Q ++ A Sbjct: 113 DLAAIEAAVSHIAKADMIYAFGSGGNSSMIADELQNRLFRLGLRITASSDHSMQLMMAAA 172 Query: 180 LKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETE 239 + GDV I S+SG E+V E AR+ IA+T DSP+ + A + E Sbjct: 173 ARPGDVLIGSSFSGRNMELVRAFELARQTKVKTIALTQT-DSPVAKAAEIVVPIDLPEGH 231 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSE 279 STR A + D+L + ++ ++R + Sbjct: 232 NIYRPTSTRIAYIATIDILSSLVAYAVQPKATTTLRRIKQ 271 >UniRef50_B6GAC9 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAC9_9ACTN Length = 270 Score = 222 bits (568), Expect = 7e-57, Method: Composition-based stats. Identities = 59/282 (20%), Positives = 119/282 (42%), Gaps = 19/282 (6%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSE-LQSVSSRQMAKQLGISQSSIVKFAQKLG 59 M + KI + FT+ E IA F+ + + ++ ++++LG+ +++IV+F +KLG Sbjct: 1 MSIIGKIESCLPSFTKTETIIARFILDHREDGVEQYLLGDLSRELGVGEATIVRFCRKLG 60 Query: 60 AQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCAL 119 GFTEL+ L E + ++ +++ T ++ Sbjct: 61 LGGFTELKFLLSVENEEHTAARENS------------------GEIKDILISSIKMTDSM 102 Query: 120 LDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQA 179 + + ++++ A + G+G S L +L + G R + H Q + Sbjct: 103 VSSKDISDVVDLAGAASEVFFFGIGMSGLSASMGESRLFRFGKRTKAITEAHAQNMQASL 162 Query: 180 LKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETE 239 + + +A+S SG +++ A++ GA V+AITS S L LA + L + Sbjct: 163 CDENSLIVAVSISGETIDLIEAVSLAKESGAKVVAITSYLRSTLAELADYVLLSFGKPNY 222 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 + + ST +Q + DL+ E+ + +R + Sbjct: 223 INAGAFSTVVSQLYILDLITSEYALRFSAEAARSKKRIARSI 264 >UniRef50_C2L0R5 Possible transcriptional regulator RpiR n=1 Tax=Oribacterium sinus F0268 RepID=C2L0R5_9FIRM Length = 314 Score = 222 bits (568), Expect = 7e-57, Method: Composition-based stats. Identities = 66/285 (23%), Positives = 137/285 (48%), Gaps = 6/285 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + +I + + E QKIAD+L + + ++A++ G+S +S+ +F + +G + Sbjct: 27 SVIPEIKSLYPQMNEAMQKIADYLIDTEDKKCVERASELARRSGVSTASVSRFVKMMGYK 86 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 F + R+ ++ E + + IT D I + + + LE+T +LD Sbjct: 87 EFRDFRLKIVMEKQEENRQEENELNYNGEPITGD--AHSICKTIFSKSVRELEETWGILD 144 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + +Q + ++I +A I + G+G S + L +L +IGY + +D H ++ ++ Sbjct: 145 FDTMQTVADLIHEARRIVVIGVGRSKVTMEALYSRLYRIGYPIMMFSDAHEIVNITSIME 204 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 K D+ I +S G K +V A A+K+G V+ I+S+ +SPL +++ +TL + + Sbjct: 205 KKDILICVSNFGQSKSVVEGARRAKKRGIQVVGISSIKESPLAKISDYTLFSAYDYNNAQ 264 Query: 242 SSSM----STRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 ++ S AQ + D L++ + N +++ + S Sbjct: 265 DGNLFDPSSENLAQLVIVDCLYMLVAHKNKRKNITYFKTFSNEIH 309 >UniRef50_Q15N75 Transcriptional regulator, RpiR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15N75_PSEA6 Length = 282 Score = 222 bits (568), Expect = 8e-57, Method: Composition-based stats. Identities = 95/285 (33%), Positives = 161/285 (56%), Gaps = 6/285 (2%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M TKI + +E K+A F+ ++ + ++ +SS+++A +G+SQSS+VKFAQKLG Sbjct: 1 MSTFTKIKAIKDTLSNSELKLAKFVLSSSNAVRDLSSQELANVVGVSQSSVVKFAQKLGY 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +G+ ++ +I +++ + N LH IT +DS + ++ KL K L +T L Sbjct: 61 KGYPAFKLGVIDALNSTASEGN-----LHGKITLNDSFKQVSEKLLSSKVAVLTETKNLN 115 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + A + +E++ A I I GLGGSALVG+D S+KL K+G E D H Q + L Sbjct: 116 EEAAFHQAVELLKSAKRILICGLGGSALVGKDFSYKLQKLGMLAIEEPDMHAQLAFAATL 175 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + D+ AIS SGS +EIV + A++ VI +T +P+ LA L +V+ E Sbjct: 176 SENDLVFAISESGSTREIVNVVKQAKQNSCKVITVTRYGATPVSDLADIKLYSVAEEESA 235 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 R SS+ RTAQ + D+LF+ + Q + + +++++++ + + Sbjct: 236 RLSSIMARTAQEFIIDILFIAITQSSR-QGRQLLEKTNSVVSDFR 279 >UniRef50_D1AYR1 Transcriptional regulator, RpiR family n=2 Tax=Fusobacteriaceae RepID=D1AYR1_STRM9 Length = 281 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 71/278 (25%), Positives = 140/278 (50%), Gaps = 4/278 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M L K+ ++FT +E+ IA FL N ++ + +R++AK+ S S++ + +K+G Sbjct: 1 MSILVKLREN-NDFTSSEKDIAKFLMNNYKNIKKIDARKIAKETFTSVSAVTRTCKKIGL 59 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF E ++ LI E + ++ ++S I ++ +I KLN+ +L++T L Sbjct: 60 RGFQEFKIDLIEELANLEQQKLE---FVNSDIERNNDTRMIIEKLNKLSISSLKETKLLQ 116 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D + K++++I K I G+G S +V D +K M+IG +Q + Sbjct: 117 DPDIIDKVVKLIKKKKVIDFYGIGASHIVCLDAQYKFMRIGKVCNAFGPFDLQYIQAVNS 176 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 ++ I ISYSG ++I+ +E R +G ++IT + + A+ L S E+ Sbjct: 177 TDDNLAIIISYSGMTEDIIKISEVLRNKGIETVSITMYGSNKVASNANHNLYVTSKESLK 236 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSS 278 RS+++ +R + ++ D++++ +N E I + Sbjct: 237 RSAAIYSRISMLNLIDVIYLKYSNMNFDEVSVKINETQ 274 >UniRef50_B7LQI9 Transcriptional regulator n=32 Tax=Gammaproteobacteria RepID=B7LQI9_ESCF3 Length = 301 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 64/285 (22%), Positives = 123/285 (43%), Gaps = 14/285 (4%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 ++ I+ T E++IA F+ +V + ++A+ SQ+S+ +FA+ LG + Sbjct: 20 DIISCITERFMALTATEKRIAQFILDDVPAAVELPIAELARLTQTSQASVTRFARALGCK 79 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 EL++ L + + + D ++ I + LE LD Sbjct: 80 DVRELKVKLAQSLAIGQRFIL--------DVPDLDGVQGIYESI----ISVLETHRRSLD 127 Query: 122 YARLQKIIEVISKAPFIQITGL-GGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 + + + +S+A I G GGS + +++ ++L ++G V + D + + A+ Sbjct: 128 MNAISQAVSWLSQARQILALGTGGGSTICSQEIQYRLFRLGLPVVSQNDALMMRMMCSAV 187 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 DV I +S G EI+ A AR+ GA VIAIT +PL L + E+++ Sbjct: 188 MPQDVVIVLSLGGYTPEIIESAAIARQYGARVIAIT-PAQTPLAEQVDLVLPLLVQESDY 246 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +R A ++ D+L L N ++ ++R + + Sbjct: 247 IFKPTPSRYAMLAMVDVLATELAMANKAQAKDRLRRIKLVLDSHR 291 >UniRef50_Q03FC5 Transcriptional regulator n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03FC5_PEDPA Length = 280 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 67/285 (23%), Positives = 126/285 (44%), Gaps = 12/285 (4%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 L +SN +F+ +EQK+A F+ E+ +++ +++ + +S +++V+ A+K+ Sbjct: 3 NILFTLSNDFEKFSRSEQKVARFMIDYPREVIQMNAEEISDRTQVSPATVVRLAKKICKS 62 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G L++ + E L++ + D L+V+ KL A+ QT +L Sbjct: 63 GLPGLKIQVASEIKV--------DDSLYTEVNPSDDLDVMKHKLEFRISHAIGQTNQILL 114 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 ++K +++ +A I + G+G S LV D K ++IG V DTH K Sbjct: 115 KNDVKKATDIVEQADDIYVFGMGASNLVAEDFQQKFIRIGKSVIQTLDTH--LMAVGLAK 172 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVS--GETE 239 V I +S SG KE A +IAIT +S + + + TL Sbjct: 173 PNSVLIVVSDSGETKESCHITRVASSLNIPIIAITHERNSTIAKNSTVTLTHDDGGESGV 232 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 R+++ ++ AQ V DLL+ + + + + +S + Sbjct: 233 LRTAATTSLLAQLYVVDLLYYAYLTQDFSNNKARLVKSKTIIAEN 277 >UniRef50_C2LK66 Phosphosugar-binding transcriptional regulator n=4 Tax=Enterobacteriaceae RepID=C2LK66_PROMI Length = 283 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 71/284 (25%), Positives = 143/284 (50%), Gaps = 5/284 (1%) Query: 1 MLYLTK-ISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLG 59 M LTK + N + EQ++A +L N + S+++ ++A++ G+S +S+++F++++G Sbjct: 1 MSTLTKKLENLRLQGKGTEQRLAHYLLENSDNIASMNAAELAQKAGVSSASVIRFSRQMG 60 Query: 60 AQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCAL 119 G+ E ++ + E ++ +++ L++++ DS E I K A++ + AL Sbjct: 61 YGGYPEFKIDYLSE----EKQQKSSSDILYANLAKTDSTEQIIAKTGHLFTTAIQDSIAL 116 Query: 120 LDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQA 179 LD A + + E + A I + G+G SA+V D+ KL+++ AD H Q S Sbjct: 117 LDAATIDLLAEKMISAKRIVLFGVGASAIVASDIFHKLIRVNKNTLFSADLHAQLAYSAN 176 Query: 180 LKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETE 239 L D+ IA++ G+ +I +AA+++G +A+T RLA++TL E Sbjct: 177 LSADDLAIAVTARGNTADINRMLKAAKQEGCITVALTRFGQDEATRLANYTLPYFYDEQH 236 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQR 283 + ++ + Q D+LF + L + K + + + + Sbjct: 237 SQLGVITPQVLQMVAFDVLFFKYMTLAKGSAEKALLKGRQAVMQ 280 >UniRef50_D2ELR8 Transcription regulator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2ELR8_PEDAC Length = 280 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 70/285 (24%), Positives = 135/285 (47%), Gaps = 12/285 (4%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + + N +FT+ E+++A F+ + +++Q+A Q+G S +++++ A+++ Sbjct: 5 SVVFTLKNQLGDFTKKEKQVARFIIKYPQAVIDSNAKQVADQVGTSAATVIRLAKRVCKN 64 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G EL+ L E + + I D+LEV+ +K+ +EQT + Sbjct: 65 GLPELKERLKNETMVNDK--------FFEEIDPADTLEVMKQKMEYRINHTIEQTNRTVK 116 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 ++ +++ +A + G+G S LV DL K ++G VA D H ++ K Sbjct: 117 GGAVRNAAKLVDQADVVYTYGIGASHLVADDLQQKFGRLGKPVAQTQDVH--LLAAEMSK 174 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVS--GETE 239 V + IS SG KE + AAR V+AIT + SPL R + L + Sbjct: 175 GRGVVVLISNSGETKETLQLLGAARALDLPVVAITRVLSSPLARQSTVVLAHSDSGEGNQ 234 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 RS++ ++ AQ V DLL+ ++L+ +++ + +S ++ + Sbjct: 235 LRSAATTSLMAQLYVVDLLYYSFLKLHFEDNVDQLTKSRKIIKSN 279 >UniRef50_C0XD02 RpiR family transcriptional regulator n=1 Tax=Lactobacillus gasseri JV-V03 RepID=C0XD02_9LACO Length = 294 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 59/286 (20%), Positives = 128/286 (44%), Gaps = 4/286 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 ML ++ + NE+ +A++L ++ + R +A++ S S+I++ KLG Sbjct: 1 MLIKDQLREKK-NMSNNEKIVANYLLKADENIEKDTVRTVAEKTYTSPSTIIRLCHKLGF 59 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 GF++ + + E + + ++ +D+ + K+ ++ T ++ Sbjct: 60 TGFSDFKNKFLNEVKYFNLQFQN--VDVNFPFRREDTAREVMSKITDLYIETIKDTEKVV 117 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D L + ++ S++ I I G K+MKIG +V ++ + Q ++ + Sbjct: 118 DMRTLLRCRKICSESEEIHIFSYGTYLNQAYSFKEKMMKIGKKVMISSNLNYQLYEAEIM 177 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + GD+ I ISYSG +L A+ RK IAITS+ ++ L ++ TL + E+ + Sbjct: 178 QAGDIAIIISYSGETNNSLLIAKQCRKNNIPTIAITSIGENDLTKICDETLYISTKESLY 237 Query: 241 R-SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + S + + V D+L+ + Q + + + ++ + Sbjct: 238 KNIGDYSIHLSVSYVLDVLYSLIFQNDFEHFYETKMNLAMSLEKDR 283 >UniRef50_C4KYQ0 Transcriptional regulator, RpiR family n=1 Tax=Exiguobacterium sp. AT1b RepID=C4KYQ0_EXISA Length = 267 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 63/281 (22%), Positives = 122/281 (43%), Gaps = 20/281 (7%) Query: 5 TKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFT 64 +I + SE T +E+KIAD+L AN++E ++ +A + S +I +F +K+G ++ Sbjct: 3 EQIKHVYSEMTGSEKKIADYLMANMNEAIEMNITDLANAIATSPGTITRFCKKIGVGSYS 62 Query: 65 ELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYAR 124 L++ + + + + + R ++ T L+D Sbjct: 63 SLKLMMQKTLTETNLPQTTS-----------------LEPMQRSYIELIQTTAHLIDQDE 105 Query: 125 LQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD 184 L I + I+ + + + GLG + LV +++ ++L ++G D+H + + D Sbjct: 106 LLAICKEITSSRSVHLYGLGNAGLVAQEMEYRLRRMGLLATTAFDSHSMVMDASIVTSED 165 Query: 185 VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSS 244 V IA S SG +E+V + A++ G T +A SPL L + L T E Sbjct: 166 VVIAFSNSGESREVVQAMQLAKESGCTTVAFVGYQHSPLAELVDYRLLTAGASGEAFL-- 223 Query: 245 MSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 ++T+ D + L++ N ++ + RLK Sbjct: 224 INTQLPLLFTADAVTKTLMETN-EALKAHYLQTLKALDRLK 263 >UniRef50_UPI0001BC57B3 oxygen-independent coproporphyrinogen III oxidase n=2 Tax=Fusobacterium RepID=UPI0001BC57B3 Length = 538 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 72/245 (29%), Positives = 142/245 (57%), Gaps = 3/245 (1%) Query: 41 AKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEV 100 A+ + ++IV+F++KLG +GF + +++L + + +++ +H I D+ E+ Sbjct: 295 AENIYQGGTNIVRFSKKLGFKGFPDFKLSLSQDIGNRKAESHVNI--MHEEIKPTDTFEI 352 Query: 101 IARKLNREKELALEQTCALLDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKI 160 I +K+ E +A+ T + D+ L+K +++IS+A I + G+G S +V +D FKL+++ Sbjct: 353 IGKKVATENTMAVNNTYEITDFKELEKAVKMISEARKIMLAGVGFSGIVAKDFHFKLLEL 412 Query: 161 GYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTD 220 G + E DTH+Q + + + DV IS+SG E+ A+AA+ + +I +TS+ Sbjct: 413 GKQTLFENDTHMQLSYLATMNENDVLFVISHSGKTLEVFNLAKAAKNRKVKIITLTSVVQ 472 Query: 221 SPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSEL 280 SP+R L L TV ++++R++++S R +Q +V D++++ L+ N + I + EL Sbjct: 473 SPIRELGDIKLSTVEMKSDFRATALSPRISQLTVIDMIYIKLMLEN-EDLQDYIFNAIEL 531 Query: 281 TQRLK 285 + K Sbjct: 532 VKGFK 536 >UniRef50_C0X0S9 RpiR family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X0S9_ENTFA Length = 285 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 69/287 (24%), Positives = 127/287 (44%), Gaps = 5/287 (1%) Query: 1 MLYLTKIS--NAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKL 58 M L I +T NE I DF+ ++ + +S ++A+ S S+IV+ +K Sbjct: 1 MNPLNLIECLEQKERYTYNEGLIIDFILSHTERVLHMSIYELAEATNSSTSTIVRLCKKT 60 Query: 59 GAQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCA 118 GF E ++ L + + + + + DS +IA+K+ + ++ T Sbjct: 61 ETSGFKEFKIRLSRDLEIHYQAI--RNVDANMPFLAQDSDLLIAKKIAQLTTETVQSTQQ 118 Query: 119 LLDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQ 178 LL A L K I+++ A I G+ S + D KL++I + Q ++ Sbjct: 119 LLTEAMLNKSIDLLLTAENILAVGVSNSYIRLTDFQTKLLRIQLFIHLIPYQAEQFYLAI 178 Query: 179 ALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGET 238 K DV I +SYSG+ EIV A + G +IAITS +S L + A L + E Sbjct: 179 NATKNDVAILVSYSGNTAEIVNEARIFAEGGTPIIAITSDLNSQLAKYATVILPIPNVEH 238 Query: 239 -EWRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 +++ S+ S++ A + ++L+ + N ++ + + + Sbjct: 239 ADFKVSTFSSQLAIEYILNVLYSCIFSRNFDKNYTSQKNTPTSILKF 285 >UniRef50_C9A857 Transcription regulator n=3 Tax=Enterococcus casseliflavus RepID=C9A857_ENTCA Length = 297 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 58/283 (20%), Positives = 124/283 (43%), Gaps = 4/283 (1%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 ML K+ T E++IAD++ N++++ S++ +AK S SS+++ A+K+G Sbjct: 1 MLLGDKLR-LQEGLTNTEKRIADYILQNINDVPSLTIEVIAKHTYTSHSSVIRLAKKMGY 59 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 +GF R+ L A + N T + + + D I +K+ ++ +T A + Sbjct: 60 EGFKSFRLGLAE--IAHNQMFNPTFVDANFPFSPKDQTPDILKKMADLTINSIHKTHAQV 117 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 ++ +++ + A I + G S + R KL+KI + + A + + Sbjct: 118 APEMMEAVVQSLEAAQRIFLFARGDSQIRARSFQNKLVKINKYLILADEYGDDAWNASNV 177 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + D + I+Y G + + R G VI I+ + + LA + E ++ Sbjct: 178 TQNDCAVFITYRGKNTQYEKIMQHFRDVGVPVIVISGNAHAKIIPLATHAIIASHDERDF 237 Query: 241 -RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 + + S++ A + D LF L +++ +++ + + Sbjct: 238 LKVGTFSSQVAFEYILDSLFALLYAKEYQKNIVELRKKQTVLE 280 >UniRef50_A8RCR9 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RCR9_9FIRM Length = 289 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 64/286 (22%), Positives = 135/286 (47%), Gaps = 10/286 (3%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 LT+I + +++EQK+ +++ + ++ +S+ +++ IS+ ++++F ++LG QG Sbjct: 6 ILTRIESLMPFLSKSEQKLGNYILTHPKDVTDMSTSALSQACDISEPTLIRFTRRLGFQG 65 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 + + ++ L + +++ + ++L +DS I RKL +L T LD Sbjct: 66 YKDFKLHLSANFISNQIDSTPVKVNL------NDSAIEIYRKLASFTINSLNSTLNTLDA 119 Query: 123 ARLQKIIEVISKA----PFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQ 178 L+ I A I ++G+G S ++ + K+M++ + D H++ Sbjct: 120 NDLENATNYIYVAAKQNRKIFLSGMGASTVLIHEFQIKMMRLNIQTIFFEDIHLRLEACA 179 Query: 179 ALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGET 238 LKK D+ I + G+ KE + A ++ A +I IT +S + A L T E Sbjct: 180 NLKKNDLFICFTTLGASKENYELIDIAHERKAKIIVITQFGNSQIAEKADIALYTSIIEN 239 Query: 239 EWRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 R +S ++ Q+ V D+LF+ + + ++ E ++L Sbjct: 240 NLRLASQTSIILQSMVIDVLFLTIACKDYASITNSVKDFREKFKQL 285 >UniRef50_A4E6N7 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6N7_9ACTN Length = 301 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 67/272 (24%), Positives = 132/272 (48%), Gaps = 9/272 (3%) Query: 15 TENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEY 74 +E+EQ+I D++ + SE +++ Q+++ S++++ +F +KLG F + +L + Sbjct: 35 SESEQRIVDYILEHQSEAPRLTAAQLSRAAATSEATVSRFCRKLGFGSFRSFQFSLARDL 94 Query: 75 SASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISK 134 + R + + L D++E + + K L T +D+ L ++ + Sbjct: 95 ESQRNEGLTDEVSL-------DNMEQSLKNILAAKVSELNATIDGIDHDTLAAVVHALKH 147 Query: 135 APFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGS 194 A I+ +G + V D +FK ++G R + + L+ GDV + IS SG Sbjct: 148 AGVIEFAAVGNTNAVALDATFKFSQLGLRCMASTISETSIGFALTLRPGDVIVLISNSGK 207 Query: 195 KKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMS-TRTAQNS 253 + + A+AAR GATV+ I+S + SPL RLA +T +TV+ E + + ++ + Sbjct: 208 SRRLNRMAKAARNCGATVVVISSDSKSPLARLADYTFNTVNHEALLTTGDFAFSKISATM 267 Query: 254 VTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + ++++ L+ + + I EL Q K Sbjct: 268 IIEVIYNFLLPEIKD-AREHISYYEELIQPDK 298 >UniRef50_C2KAY2 Transcriptional regulator n=6 Tax=Lactobacillus RepID=C2KAY2_9LACO Length = 281 Score = 219 bits (560), Expect = 6e-56, Method: Composition-based stats. Identities = 69/284 (24%), Positives = 130/284 (45%), Gaps = 6/284 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 KIS+ + + IAD + + +++ S +S+V+F + LG + Sbjct: 3 NLANKISDVYPNLNKTSKLIADVYFKEPRIFLNKNLQELGTITQTSGASVVRFCRNLGFK 62 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF + ++A E N + + I ++D + KL + +D Sbjct: 63 GFKDFQIACAQEM------PNKQDAMVDTIINTNDEPTSVLYKLQLSLGKNIADIGKTID 116 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + L ++++ A I + G G S L +DL +KL++ G V +H+ + Sbjct: 117 HKSLDAAVDLMRSAQQIYVAGEGASGLAAQDLFYKLIRSGKNVNFVQSSHIALEQVANIN 176 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 K D+ I SYSG +E +L A+ A+K A ++A+T + DSPL+ +A + S E R Sbjct: 177 KEDILIVFSYSGLTQEPLLMAKQAQKNNAKIVAVTRIQDSPLKNMADTVITLPSNEKLLR 236 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 ++++ A+ + LL++ L+ N E ++ + LT +LK Sbjct: 237 YGAINSLFAEIFASSLLYLSLISPNLEELNMKMKTTQNLTNQLK 280 >UniRef50_Q0BBX6 Transcriptional regulator, RpiR family n=65 Tax=Proteobacteria RepID=Q0BBX6_BURCM Length = 324 Score = 219 bits (560), Expect = 6e-56, Method: Composition-based stats. Identities = 63/285 (22%), Positives = 127/285 (44%), Gaps = 9/285 (3%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + +I+ E E E+K+A ++ A+++ S +A+ G+S +++ +FA+ +G + Sbjct: 38 DIVARIAECAPELREAERKVAAYILADLARAAHASIGALARDAGVSVATVTRFAKAVGCR 97 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 EL++ + + + + H + + R L T Sbjct: 98 DVRELKVLVAQAAAVGQRFLVPSDAHPAEDASPASVVYDEIRVALAHNHQLLRNT----- 152 Query: 122 YARLQKIIEVISKAPFIQITGL-GGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 ++++ A + + G GGS + +L F+L++ G VA D+ +Q V+ L Sbjct: 153 --SFDAAADLLAGAKMVYVYGQGGGSTALADELRFRLVRFGRPVASYQDSLLQRMVAATL 210 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 + V +A+S SG E++ A++ GAT+IAIT+ SPL +LA + V+ ET++ Sbjct: 211 SRDAVVVALSVSGRVPELLESCRLAKRYGATLIAITA-PASPLAKLADHLIPVVAFETDF 269 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 ++R A D+L G+ + ++R + Sbjct: 270 IYKPSTSRYAMMMAIDVLVTGVALRLGDAGRESLRRIKHALDAHR 314 >UniRef50_A1HTD9 Transcriptional regulator, RpiR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTD9_9FIRM Length = 282 Score = 219 bits (560), Expect = 7e-56, Method: Composition-based stats. Identities = 56/284 (19%), Positives = 117/284 (41%), Gaps = 10/284 (3%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + I + + +KIA++L + + ++++++ + LG+S++++++FA L + Sbjct: 4 SLVKNIQEHYHGMSASHKKIAEYLLDHYDKAVFLTAKELGQTLGVSEATVIRFAVALNYK 63 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G+ EL+ AL L L D + K ++ T + Sbjct: 64 GYPELQQALQDMVKNKITTVERLRLALL------DGQTNLPHKALSTDISNIQLTMEEVT 117 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 A +K + I +A I I L + +G L F L + + Sbjct: 118 SADFEKAVNEIIQARNIYIVSLRSATALGYFLHFYLQLLLQNSRLIHGVGTFFEEIRPAG 177 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 GD+ I IS+ ++ V + AR+ GA V+AIT SPL +H L S + Sbjct: 178 PGDLVIGISFPRYTRQTVEGLKYARENGARVLAITDSLTSPLAPYSHHVLTARSQ----Q 233 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 S + + A S+ + L + + + ++ ++++ + + + Sbjct: 234 ISFIDSFAAPLSLINALILAVGARDSAKTADVLRQMEAVWESYR 277 >UniRef50_Q1J381 Transcriptional regulator, RpiR family n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J381_DEIGD Length = 286 Score = 219 bits (559), Expect = 9e-56, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 113/254 (44%), Gaps = 15/254 (5%) Query: 4 LTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGF 63 L ++ ++ ++IA ++ A+ E+ + ++A G+ +S++ + ++LG GF Sbjct: 20 LARLHAERAQLPPTLERIAAYVVAHPEEVIYQTITELAATAGVVESAVTRLCRRLGFSGF 79 Query: 64 TELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYA 123 ++AL G+ S ++ AT + R+ A+E T + D A Sbjct: 80 HAFKIALSGDVSQAQGAAEATDPFSVA---------------ARQAVQAIEGTRQVADPA 124 Query: 124 RLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKG 183 L+++ + I+ A + + G S L + L+ KL ++G D H+ A + Sbjct: 125 ALERVAQAIAAATRVDVVGQSNSGLSAQFLANKLARVGVPAFAYTDPHLAAVAAATQSPR 184 Query: 184 DVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSS 243 V + + SGS + V A +GA +A+T SP+ R A L T S E+ Sbjct: 185 GVVVGFTRSGSTIDTVQTLRLAASKGACTVAVTHRASSPVTRYAREVLATSSPESPLAGG 244 Query: 244 SMSTRTAQNSVTDL 257 ++S+ +Q + + Sbjct: 245 ALSSLVSQVLLVEA 258 >UniRef50_A9WVK2 Transcriptional regulator, RpiR family n=2 Tax=Micrococcineae RepID=A9WVK2_RENSM Length = 346 Score = 219 bits (559), Expect = 9e-56, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 124/283 (43%), Gaps = 1/283 (0%) Query: 3 YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQG 62 + ++ E + KIA +L +S +++A + G S +++ +F + +G G Sbjct: 37 VVNRLKAQLPEMSGAMSKIARYLIEKPLAPLELSIKELADETGTSAATVTRFCRLIGYTG 96 Query: 63 FTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDY 122 + R+ + + S + + + + DDS + L +L++T A+LD Sbjct: 97 YAPFRVGVASDLGRSDAR-ESWKTDIGRAFGPDDSPRDVLSTLMNAHARSLQETAAVLDL 155 Query: 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKK 182 ++ + I+ + + I G+GGSA++ ++L +L +IG + + T + Sbjct: 156 RLMKNLARRIALSEHVDIYGIGGSAVMAKELQNRLYRIGIPCHHCTEVYAGLTSASLQNS 215 Query: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRS 242 + I IS +G +E + A GAT +A+++ +S L A F + T E + Sbjct: 216 QCIAIGISNTGRTEETIQMLRQAGLAGATTVALSNNPNSTLAESADFQITTSVHEQFLQP 275 Query: 243 SSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +S + Q DLL++ L Q N + + S+ + Sbjct: 276 DDLSAKHVQLLAMDLLYLLLAQENFPRATSQLAASAMAVAPHR 318 >UniRef50_Q1YGT9 Putative transcriptional regulator, RpiR family n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YGT9_MOBAS Length = 305 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 58/285 (20%), Positives = 118/285 (41%), Gaps = 9/285 (3%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + ++ ++ +AD L N+ S + +A + G+S+ S+++FA+ +G + Sbjct: 17 SLIDRMRQELPAMKRADRAVADALLENIDAATRSSVKAVAGRAGVSEPSVIRFARHMGCE 76 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF++ ++ L +Y+ R +A H + +A + AL A D Sbjct: 77 GFSDFKIRLAQDYAIGRMYLSADYQHPAK------TGSDVAGHVYEATSQALASAFAQRD 130 Query: 122 YARLQKIIEVISKAPFIQITGL-GGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 A L + ++I + + G+ G SA V + +L ++ + AD + Q + Sbjct: 131 PAALDRAADLIDGSRRVFCFGVGGSSANVAAEAENRLFRLDLAASATADAYKQRITAATA 190 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTL-DTVSGETE 239 K DV + S +G + ++ A +A++ GA++IA+T +PL A + E + Sbjct: 191 GKDDVFLMFSVTGRPRSLIESARSAKQCGASIIAVT-TAGTPLAIEADVLIPLIAFDEEK 249 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 + R Q + D L L + + + L Sbjct: 250 FFYMPNRGRYGQLFILDCLATLLGGRRMKHISSKLWNARTMLADL 294 >UniRef50_C0D858 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D858_9CLOT Length = 275 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 64/260 (24%), Positives = 116/260 (44%), Gaps = 9/260 (3%) Query: 6 KISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTE 65 K+ E++ A++L + + ++ +AK+ +S++++V+ K+G G E Sbjct: 12 KLRGVIGSLGAQERRFAEYLLNSFAGIEKEPIAVLAKEAQVSEATVVRVCHKMGYSGLKE 71 Query: 66 LRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARL 125 L++ + E + ++ + ++ AL+ T L+D + Sbjct: 72 LKIVVARENETAGSFDGGIGGQY---------MDELKERVFMGAIRALQDTMNLIDEDEV 122 Query: 126 QKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDV 185 +K +V+ A +I I G+GGS V R L +LMK+G + ++ KGDV Sbjct: 123 EKATKVLCNANYISIYGVGGSVPVARSLKHQLMKLGIPSNVYNEFQPTIIAAEKYNKGDV 182 Query: 186 QIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSM 245 I IS+SG ++V AR +GAT I ITS DS + + T S + Sbjct: 183 AIGISHSGESSQVVEALRIARGKGATTICITSYGDSAITHCSDVKFFTTSETLLNGGDNS 242 Query: 246 STRTAQNSVTDLLFVGLVQL 265 R AQ S+ +LL++ + Sbjct: 243 LARIAQTSIINLLYLNVALK 262 >UniRef50_B9Y4T6 Putative uncharacterized protein n=2 Tax=Holdemania filiformis DSM 12042 RepID=B9Y4T6_9FIRM Length = 277 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 76/281 (27%), Positives = 136/281 (48%), Gaps = 9/281 (3%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 +Y K+ +E T+ E+ IADF Q + E +S +S Q+A +L I QS+I++F++KLG + Sbjct: 1 MYQEKLKQVQNELTQTEKIIADFFQNHSLEARSFTSYQLADRLNIGQSTIIRFSKKLGYR 60 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 F EL L + + + I ++ +K+ ++ + + T Sbjct: 61 SFRELLEDLSTSLTEEK---------VKEEIVVNEGTSSTNQKIIQQYQKMAQLTLEFNP 111 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 + + + + KA I + G G S L +S + +K+G C A++H+ ++ Sbjct: 112 PQVIDQTVSALKKARKIIVFGFGNSNLFAEYISNQWLKMGLDSFCSANSHIIFSMLSQFG 171 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 DV IS SG EI+ A A Q TVIA+T + + L + L TV+ ET R Sbjct: 172 PQDVLFLISESGETPEILKAARIAGHQNVTVIAMTRIQKNRLHGYSDIVLKTVNYETNTR 231 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQ 282 ++M+ R +Q + D++++ L + + K+I S +L Sbjct: 232 LNAMTLRCSQLCLLDMIYLNLYKTDFEHYEKIIAESEKLLD 272 >UniRef50_UPI000196B715 hypothetical protein CATMIT_00151 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B715 Length = 282 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 57/284 (20%), Positives = 130/284 (45%), Gaps = 6/284 (2%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 + +I ++ F ++E+KIA ++ + SE+ +++ +++ G S++S+ +F +++G + Sbjct: 4 NVIDEIYSSYDHFFDSEKKIAKYIMHHTSEVVNMTVGDLSQASGASEASVSRFCKRIGLK 63 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 GF L+++L E + + + + + K L QT ++ Sbjct: 64 GFHHLKISLAQELVEIPSCNTTISNRISIT-----DVNNSLDSILANKVEELTQTITMMK 118 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 +L +I++ I K+ I +G + V D FK +IG + + + + + Sbjct: 119 SNKLDEILDCILKSRHIYFVAVGNTVPVALDGCFKFNQIGIPSSTSSILETELGMILNVS 178 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR 241 K D+ IAIS SG ++ + A Q AT ++IT+ S + + + + T + E + Sbjct: 179 KEDMVIAISNSGESSGVLTAIKEAHNQKATTLSITNSDKSSIALESDYHITTATREKVYL 238 Query: 242 SSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 +R + +V ++L++ L ++ + + +L K Sbjct: 239 EGYCFSRVSATAVIEILYLFLTT-MKEDAHEKSAQHEDLIAGDK 281 >UniRef50_C5D4L1 Transcriptional regulator, RpiR family n=1 Tax=Geobacillus sp. WCH70 RepID=C5D4L1_GEOSW Length = 282 Score = 217 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 56/285 (19%), Positives = 110/285 (38%), Gaps = 9/285 (3%) Query: 1 ML-YLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLG 59 M I+ E + ++KIA ++ N + + ++AK G+S++++V+FA LG Sbjct: 1 MNEVYRLIAEKLPEMSRAQRKIAKYVLNNPEAVPFFTVGKLAKMAGVSEATVVRFATFLG 60 Query: 60 AQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCAL 119 G+ E + A+ + DS + ++ +E ++ Sbjct: 61 FSGYPEWQQAMQESMKRQLTTVERLKISE----EVYDSEDKSIFEMFQEDIERIKAMSVQ 116 Query: 120 LDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQA 179 +D + ++ I+ A I I + +G L F + + H + Sbjct: 117 IDMDLFYQAVQYITDAKRIFIIANRSAVSLGLFLEFYFDILFENAELIRNPHGISEKLFR 176 Query: 180 LKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETE 239 L K DV I +S++ K + A+ +GA +I IT SPL TL + Sbjct: 177 LNKDDVVIGLSFARYTKSTIEAVAFAKDRGAKIIVITDHLLSPLVSYGDVTLCAPTEMPS 236 Query: 240 WRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRL 284 + + + A S+ + L + + E K + E+ +R Sbjct: 237 F----IDSFVAPLSLVNALITEVGRRKRSEVEKHLSDLEEIWERF 277 >UniRef50_B2UK47 Transcriptional regulator, RpiR family n=5 Tax=Ralstonia RepID=B2UK47_RALPJ Length = 280 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 56/235 (23%), Positives = 103/235 (43%), Gaps = 10/235 (4%) Query: 2 LYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQ 61 +I A + E+++AD++ + S+ +A++ G+SQ ++++F + +G Sbjct: 16 DLRERIRAARPSLSPAERQVADWVLRQPGTVLSLPVAAIAREAGVSQPTVIRFCRSMGCH 75 Query: 62 GFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLD 121 G ++ ++ L +A + A A ++ ++ ++ AL D Sbjct: 76 GLSDFKLRLAQGNAAHDKPRGAAAPS---------NVPRSGTRVLQDTIDALAAMRDRFD 126 Query: 122 YARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALK 181 L + ++ A I + G G S +V RD K + G +D ++ + L+ Sbjct: 127 PLALDAAVALVDTAHRIDLYGFGSSGVVARDAQTKFFRYGIPANAYSDPYLVSMSLNVLQ 186 Query: 182 KGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSG 236 GDV IAIS SG+ E+ E R+ G VIA+T+ SPL LA L Sbjct: 187 AGDVVIAISKSGALPELQTAVERVRELGVHVIAVTA-PGSPLAALADVVLPADVD 240 >UniRef50_C9A459 Phosphosugar isomerase transcriptional regulator n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A459_ENTGA Length = 268 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 59/269 (21%), Positives = 127/269 (47%), Gaps = 11/269 (4%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M +T I + +E + + K+AD++ N+ E+ +++S +A S +++++F++KLG Sbjct: 1 MSVVTTIESIKNELSTTDLKLADYIVENLDEIPTMTSNVLAVHSNTSPAAVIRFSKKLGF 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 F++ ++AL + + +S I +DDS + K+ R ++ ++ T +L Sbjct: 61 SKFSDFKLALTKDI-------ENRIYNEYSDIQNDDSFQTAKNKILRNNKMIIDATDPIL 113 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 D +Q++++ + A I + G+G S L D+ K +IG V + D ++ + Sbjct: 114 DEQTVQQVVDKMFHAKRIYVYGVGTSVLAAEDIRQKWTRIGKTVIFDKDRYLLTQQMKND 173 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGET-- 238 + IS+SG ++++ E A+ G + ++ L + L + + T E Sbjct: 174 GADSLFWGISHSGKNRDVLSLVEIAKSLGMPTLGMSQLGQNQLTKKVDTPIHTARTEDIK 233 Query: 239 --EWRSSSMSTRTAQNSVTDLLFVGLVQL 265 + S + + Q DLLF ++ Sbjct: 234 NGHYGSGATHSIILQIVTIDLLFYFYMRR 262 >UniRef50_A6UGP6 Transcriptional regulator, RpiR family n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6UGP6_SINMW Length = 284 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 75/277 (27%), Positives = 137/277 (49%), Gaps = 11/277 (3%) Query: 5 TKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFT 64 +++ + + ++ E+++A ++ NV S +A+ +S +++++ + G +GFT Sbjct: 14 SRLRSVLPKLSDAERRVALWMLKNVDLSIRQSMSAIAQATDVSDTTVLRMCRTAGFEGFT 73 Query: 65 ELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYAR 124 +L++AL E + E HSS + S A +L R AL T +LD A Sbjct: 74 DLKLALAQEPREAIE---------HSSGEPEASALQAAGRLFRAITQALNDTFGVLDEAT 124 Query: 125 LQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGD 184 K +++++ A I + G+GGS +V + + +++G R D+ +Q + GD Sbjct: 125 FAKALDLVANAKHIMVGGVGGSGIVAQAFYQRCIRLGLRCDAPIDSQLQIMHAALTGPGD 184 Query: 185 VQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSS 244 + +AISYSG + VL + A+ +GA+ + IT + S L RLA L +VS E S Sbjct: 185 LVVAISYSGITSDPVLVLQEAKARGASTLCITGNSSSALARLADVVLVSVSHEQ--GSEP 242 Query: 245 MSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELT 281 M+ + AQ ++ D L+ LV N + +R Sbjct: 243 MAAQIAQMTLVDALYAALVARNPEPAQLTEERMVNAI 279 >UniRef50_Q38V38 Putative transcriptional regulator with a sugarisomerase domain, RpiR family n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38V38_LACSS Length = 276 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 66/285 (23%), Positives = 131/285 (45%), Gaps = 12/285 (4%) Query: 1 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA 60 M + I S + EQK+A + + +Q + ++A +L +S S+I +F +K+G Sbjct: 1 MAIIEHIKQQYSFLSPQEQKVALAVIQKGASIQRIGIDELAAELQVSNSTISRFVRKIGC 60 Query: 61 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL 120 Q F + ++ + T + S S+E + + + + +T A + Sbjct: 61 QNFVDFKLQFSE-----GPQPTMTGVQGQVDHESQTSVE-----IYQFYQDVITKTQARI 110 Query: 121 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 180 A L +++ I + + I GLG S G + +L ++G + ++H+ S+ + Sbjct: 111 KQADLDQLVSWIKTSQQLFIYGLGSSGYTGAEFGQRLTRMGIQATVVTESHMMLMTSRII 170 Query: 181 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW 240 K D+ I +S SG+ +E+ + AR+ GA AITS TDSPL + TL Sbjct: 171 NKTDLVIGLSNSGNTEEVNQAVQNARENGAKTAAITSGTDSPLAAASDLTLFVEDSIGFA 230 Query: 241 RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK 285 + ++++ A V D+L + L++ D + ++++ + K Sbjct: 231 SARFVNSQFALTYVIDILAMLLLE--DEQYNWRMKQTVDTIMHHK 273 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.316 0.183 0.524 Lambda K H 0.267 0.0558 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,928,109,003 Number of Sequences: 3077464 Number of extensions: 103064557 Number of successful extensions: 397260 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 3664 Number of HSP's successfully gapped in prelim test: 794 Number of HSP's that attempted gapping in prelim test: 388438 Number of HSP's gapped (non-prelim): 5083 length of query: 285 length of database: 1,040,396,356 effective HSP length: 127 effective length of query: 158 effective length of database: 649,558,428 effective search space: 102630231624 effective search space used: 102630231624 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 93 (40.0 bits)