Phyre 2 alignment of P77245 with c2ebyA_

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Job Description | P77245
Confidence | 81.33% | Date | Thu Jan 5 12:26:46 GMT 2012
Rank | 292 | Aligned Residues | 36
% Identity | 17% | Template | c2ebyA_
PDB info | PDB header:transcription | Chain: A: PDB Molecule:putative hth-type transcriptional regulator ybaq; | PDBTitle: crystal structure of a hypothetical protein from e. coli
Resolution | 2.25 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | I | A | D | F | L | Q | A | N | V | S | E | L | Q | S | V | S | S | R | Q | M | A | K | Q | L | G | I | S | Q | S | S | I | V | K | F | A | Q
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | P | G | D | I | L | L | Y | E | Y | L | E | P | L | D | L | K | I | N | E | L | A | E | L | L | H | V | H | R | N | S | V | S | A | L | I | N
Template Known Secondary structure |  |  |  |  |  |  |  |  |  | T | T | T | T | T | T |  |  |  |  |  |  |  |  |  |  | T | S |  |  |  |  |  |  |  |  |  | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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