Phyre 2 alignment of P77245 with c1zvvA_

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Job Description | P77245
Confidence | 93.67% | Date | Thu Jan 5 12:26:46 GMT 2012
Rank | 137 | Aligned Residues | 26
% Identity | 19% | Template | c1zvvA_
PDB info | PDB header:transcription/dna | Chain: A: PDB Molecule:glucose-resistance amylase regulator; | PDBTitle: crystal structure of a ccpa-crh-dna complex
Resolution | 2.98 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | 60
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
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Query Sequence |  | V | S | S | R | Q | M | A | K | Q | L | G | I | S | Q | S | S | I | V | K | F | A | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | Q | K | L | G | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | T | I | Y | D | V | A | R | E | A | S | V | S | M | A | T | V | S | R | V | V | N | G | N | P | N | V | K | P | S | T | R | K | K | V | L | E | T | I | E | R | L | G | Y
Template Known Secondary structure |  | S |  | S |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  |  |  |  |  | T |  | S |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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