12/01/2012 01:15:14 : INFO  : Run start: Thu Jan 12 01:15:14 GMT 2012
12/01/2012 01:15:16 : INFO  : Initialised job
12/01/2012 01:15:16 : INFO  : Renaming log file 'phyre2_20120112_011513.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/49e70d8001fb5d57/phyre_20120112_011513.log'
12/01/2012 01:15:16 : INFO  : Initialised job:
Sequence
>batch____
MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA
QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALL
DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL
KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEW
RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK

12/01/2012 01:15:17 : INFO  : Checked sequence
12/01/2012 01:15:18 : INFO  : Finding homologues with PSI-BLAST
12/01/2012 01:15:18 : INFO  : PSI-BLAST 3 iterations
12/01/2012 01:17:08 : INFO  : PSI-BLAST 5 iterations
12/01/2012 01:19:28 : INFO  : Finished PSI-BLAST
12/01/2012 01:19:29 : INFO  : Running Buildali to generate a3m file
12/01/2012 01:31:19 : INFO  : Converting to HMM
12/01/2012 01:31:21 : INFO  : Calibrating HMM
12/01/2012 01:31:32 : INFO  : Searching HMM database
12/01/2012 01:37:51 : INFO  : Finished buildali
12/01/2012 01:37:51 : INFO  : Predicting secondary structure
12/01/2012 01:37:54 : INFO  : Predicted secondary structure (PSI-Pred)
12/01/2012 01:37:54 : INFO  : Predicting Disordered regions
12/01/2012 01:37:56 : INFO  : Predicted Disorder (Disopred)
12/01/2012 01:37:56 : INFO  : Running memsat_svm check
12/01/2012 01:39:20 : INFO  : Globular protein
12/01/2012 01:39:21 : INFO  : Predicted Transmembrane (memsat_svm) ID '49e70d8001fb5d57'
12/01/2012 01:39:21 : INFO  : Initialising fold library search
12/01/2012 01:39:23 : INFO  : Initialised search input
12/01/2012 01:39:23 : INFO  : Building Ensemble models
12/01/2012 01:39:25 : INFO  : Building hh.c3shoA_.model.1.pdb
12/01/2012 01:39:32 : INFO  : Building hh.c3fxaA_.model.2.pdb
12/01/2012 01:39:36 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/49e70d8001fb5d57/hh.c3fxaA_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/49e70d8001fb5d57/c3fxaA_.2.pdb
12/01/2012 01:39:38 : INFO  : Building hh.c2xhzC_.model.3.pdb
12/01/2012 01:39:43 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/49e70d8001fb5d57/hh.c2xhzC_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/49e70d8001fb5d57/c2xhzC_.3.pdb
12/01/2012 01:39:45 : INFO  : Building hh.c3etnD_.model.4.pdb
12/01/2012 01:39:50 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/49e70d8001fb5d57/hh.c3etnD_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/49e70d8001fb5d57/c3etnD_.4.pdb
12/01/2012 01:39:52 : INFO  : Building hh.d1vima_.model.5.pdb
12/01/2012 01:39:59 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/49e70d8001fb5d57/hh.d1vima_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/49e70d8001fb5d57/d1vima_.5.pdb
12/01/2012 01:40:01 : INFO  : Building hh.d1m3sa_.model.6.pdb
12/01/2012 01:40:07 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/49e70d8001fb5d57/hh.d1m3sa_.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/49e70d8001fb5d57/d1m3sa_.6.pdb
12/01/2012 01:40:09 : INFO  : Building hh.c3iwfA_.model.7.pdb
12/01/2012 01:40:14 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/49e70d8001fb5d57/hh.c3iwfA_.model.7.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/49e70d8001fb5d57/c3iwfA_.24.pdb
12/01/2012 01:40:16 : INFO  : Building c3shoA_.1.pdb
12/01/2012 01:40:21 : INFO  : Building c3fxaA_.2.pdb
12/01/2012 01:40:28 : INFO  : Building c2xhzC_.3.pdb
12/01/2012 01:40:34 : INFO  : Building c3etnD_.4.pdb
12/01/2012 01:40:40 : INFO  : Building d1vima_.5.pdb
12/01/2012 01:40:46 : INFO  : Building d1m3sa_.6.pdb
12/01/2012 01:40:52 : INFO  : Building d1jeoa_.7.pdb
12/01/2012 01:40:57 : INFO  : Building c2puwA_.8.pdb
12/01/2012 01:41:03 : INFO  : Building c3trjC_.9.pdb
12/01/2012 01:41:09 : INFO  : Building c2zj3A_.10.pdb
12/01/2012 01:41:15 : INFO  : Building d1x92a_.11.pdb
12/01/2012 01:41:21 : INFO  : Building d1j5xa_.12.pdb
12/01/2012 01:41:27 : INFO  : Building d1tk9a_.13.pdb
12/01/2012 01:41:32 : INFO  : Building c2yvaB_.14.pdb
12/01/2012 01:41:37 : INFO  : Building d1nria_.15.pdb
12/01/2012 01:41:42 : INFO  : Building c1nriA_.16.pdb
12/01/2012 01:41:46 : INFO  : Building c2a3nA_.17.pdb
12/01/2012 01:41:51 : INFO  : Building d1x94a_.18.pdb
12/01/2012 01:41:56 : INFO  : Building c3fj1A_.19.pdb
12/01/2012 01:42:01 : INFO  : Building c2x3yA_.20.pdb
12/01/2012 01:42:46 : INFO  : Finished HH model building
12/01/2012 01:42:46 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
12/01/2012 01:43:26 : INFO  : html domain output complete ID '49e70d8001fb5d57'
12/01/2012 02:17:37 : INFO  : Run end  : Thu Jan 12 02:17:37 GMT 2012
