HHsearch 1.5 NAME batch____ FAM FILE query COM //bmm/www/servers/phyre2/HH/hhmake -i /bmm/www/servers/phyre2/public_html/phyre2_output/49753e2b121b702c/query.a3m -o /bmm/www/servers/phyre2/public_html/phyre2_output/49753e2b121b702c/query.hhm DATE Tue Jan 17 10:22:59 2012 LENG 103 match states, 103 columns in multiple alignment FILT 45 out of 47 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.2 EVD 0.4142 -0.8908 SEQ >ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCEEEEECCEEEEEECCCCEEEEEEEEHHHCCCCCCCCCCEEEEEEEEECHHCCEEEEEE EEC >ss_conf 9588989999999986401000234444599999999647531565145799997328846766875122034433577558999998581106558999 969 >Consensus xxkxxlxxxllxxxxfsxxxxAxxxxxxGxIxFxGaIVeppCxvxxxxxxvxxsCxrngkxxtxxxxlxxxxxxxxxxxxxgxxxxxwlnxxkxlaixtI xYr >batch____ MFRPFLNSLMLGSLFFPFIAIAGSTVQGGVIHFYGQIVEPACDVSTQSSPVEMNCPQNGSIPGKTYSSKALMSGNVKNAQIASVKVQYLDKQKKLAVMNI EYN >UniRef50_Q7N359(1-103:103) Similar to putative membrane protein n=2 Tax=Photorhabdus RepID=Q7N359_PHOLL E=1e-10 s/c=0.66 id=27% cov=97% MFRVIMGCffLMISGLVNSEPETASNT---GVIRFSGAIVESPCRFDWRDNWADTTCWRKGHkiIQRRKLDLQNDIY-FYLPHQIGVTEIKWIKGKEKIG VVTIFYN >UniRef50_C9Y0V7(1-100:100) Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9Y0V7_CROTZ E=7e-10 s/c=0.65 id=24% cov=97% MYKPLFVTLITaAFVGFSGPGFAQ---PGGTIAFHGAIVEEGCAVTHQTARIEVSCARGNQVHRQTLTLRAS-GVREIHSEWVHSRLDYLNPAHTLGILT LTYR >UniRef50_C5BG31(8-108:108) Putative uncharacterized protein n=2 Tax=Edwardsiella RepID=C5BG31_EDWI9 E=7e-09 s/c=0.61 id=23% cov=98% LVKIVVMGMLLGAGLAGTPVQAAGS---GVVQFGGMIVEDGCQFKIVNNQVYSECYRDGKAQTATHSVEQVQQGAMAlPAQVGESHLSWLDNAHAQALIT VSYR >UniRef50_B5XQQ6(18-95:95) Putative uncharacterized protein n=4 Tax=Klebsiella RepID=B5XQQ6_KLEP3 E=0.0002 s/c=0.60 id=19% cov=71% ----------------------------GQVHFSGRVINPACLIAPQRNRIDVSCQ---HRSPEQVALTDNPPRYAMPDDRGEVSLHWRNAQHSEADVII RYR >UniRef50_B6XJM5(11-116:117) Putative uncharacterized protein n=1 Tax=Providencia alcalifaciens DSM 30120 RepID=B6XJM5_9ENTR E=2e-19 s/c=0.92 id=26% cov=100% IFSRAVMALLLVPTLGAINAYADNNGHSGTIQFTGAIVYGACLNEVGNNNVTLNCLdDNDDMVANNIDLKKLVKTQgwtVLNGGRSSYSYNWVNKDKKIG MLTIKY- >UniRef50_B2PVJ1(6-109:110) Putative uncharacterized protein n=2 Tax=Providencia RepID=B2PVJ1_PROST E=5e-16 s/c=0.82 id=20% cov=97% -IKTALSFALIATALFTTNVQAKTNST--TITFKAMIVYPPCNYSFNNNNAQLNCYNSEENKVKTSSFNYTKQSPSSEWKKTEdnrsiYQFNWTNKEKGL AMVSVKY- >UniRef50_B4ETA1(4-107:108) Putative exported protein n=2 Tax=Proteus mirabilis RepID=B4ETA1_PROMH E=3e-15 s/c=0.80 id=26% cov=94% ----ILCSLLVSSSIsFAWASTAQQTT--GQIYVRGAIVDPACEINFTLDQAEYQCYKNNKVFTSTQSIfptsFEQSSSIILPQNMGKAEIRWMDGAEKN GLINVQY- >UniRef50_A4SJT3(6-105:105) Putative uncharacterized protein n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SJT3_AERS4 E=3e-15 s/c=0.83 id=23% cov=98% --KTIAMAITLATLGISMAQAASASST-GRITFSGAIVEDACRVNQQEKQMQVTCLSGPSQTTETVDLQQLAREASMSLSHSQVSYQWVDEGRTMAIVTI SHK >UniRef50_B4ETA0(2-103:103) Putative exported protein n=3 Tax=Proteus RepID=B4ETA0_PROMH E=6e-15 s/c=0.80 id=27% cov=86% -------------LLLTAPSLARESKVLGstTITFVGAIVEGGCYASSEENTVKTSCWNGKEMKDFQYKLDANQQFNSQLiNNKGFMDIEWINDH--LAV MNIVYN # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * 2053 * 1980 1439 * * * * * * 2871 * * 1 0 * * * * * * 3736 0 0 F 2 * * * * 887 * * 3076 * 3282 * * * * * * * 3081 * 3061 2 0 * * * * * * 3981 0 0 R 3 * * * * * * * * 989 * * 3336 * * 1674 3577 * * * * 3 0 * * * * * * 4256 0 0 P 4 * * * * * * * 3375 * 3620 * 3882 2590 * 1995 * 1999 3518 * * 4 0 * * * * * * 4256 0 0 F 5 2627 * * * 2840 * * 1439 * 3562 * * * * * 3418 * 2723 * * 5 0 * * * * * * 4428 0 0 L 6 3691 * * * 3607 * * * * 920 3761 * * * * 3542 * 2713 * * 6 0 * * * * * * 4501 0 0 N 7 * 3597 * * * 2921 * 3856 * * 2121 3030 * * * 2953 2712 3607 * * 7 0 * * * * * * 4501 0 0 S 8 1630 3978 * * 3015 3699 * * * 4148 * * * * * 2900 2169 * * * 8 95 3978 * 1000 1000 * * 4586 1000 0 L 9 2261 * * * * 2272 * 3891 * 1373 2933 * * * * * * * * * 9 0 * * * * * * 4659 0 0 M 10 * * * * * * * 2371 * 867 2335 * * * * * 4051 * * * 10 0 * * * * * * 4745 0 0 L 11 4317 * * * * 4532 * 2770 * 846 4682 * * * * * 4136 3966 4514 * 11 230 4136 3465 0 * * * 4745 1000 0 G 12 1077 * * * * 2566 * * * * * * * * * 2496 * 2474 * * 12 0 * * * * * 0 4466 0 1539 S 13 3437 4392 * * 3205 4281 * 2620 * 3851 * * 3989 * * 2450 2171 * * * 13 0 * * * * 971 1030 4466 0 1539 L 14 3382 * * * * 4195 * 3139 * 1922 * * * * * 2608 2291 3270 * * 14 0 * * * * * 0 4905 0 1000 F 15 * * * * 1715 3422 * 2683 * 1509 4276 * * * * * * 4524 * * 15 82 4176 * 0 * 0 * 4966 1000 1000 F 16 4457 * * * 977 4580 * 2515 * 3349 * 4658 * * * 3445 * * * * 16 57 * 4690 * * * * 5011 0 0 P 17 2824 * * * * 4413 * 3672 * * * * 5043 * * 1218 2161 * 4339 * 17 0 * * * * * 0 4954 0 1000 F 18 3175 * * 4596 2634 4492 4268 4550 * 4589 4390 5234 * * * 3483 2484 * 2918 4992 18 0 * * * * 0 * 4954 0 1000 I 19 3048 4109 * * 4119 * * 3816 * * 4154 2431 1854 * * 3227 3889 * * * 19 0 * * * * * * 5070 0 0 A 20 1469 * * 4780 * 4677 5646 * * * * * 4119 4569 * 2132 4528 2539 * * 20 0 * * * * * * 5070 0 0 I 21 2731 * * * 2233 * * 4015 * 3302 3561 4699 * 3251 * * 3064 4549 * 3593 21 0 * * * * * * 4989 0 0 A 22 408 * * * * 2744 * * * * * * * 5286 * 3812 * * * * 22 0 * * * * * * 5003 0 0 G 23 3022 * 3302 4862 * 4314 4889 * 4963 * * 3457 * 2858 4661 2178 3452 * * 4500 23 87 5348 4869 2585 263 * * 5003 1000 0 S 24 2002 * * 4605 * 3934 * * * * * 2380 * 2528 * 2834 3160 5252 * * 24 15 * 6642 * * * 0 4955 0 1000 T 25 4252 * 5051 * * 3889 * 4377 * 4156 * 2655 * 5121 5927 1968 2143 4870 * 5290 25 102 * 3868 * * 922 1082 5124 0 1556 V 26 2659 * * * * 4688 * 5171 4651 * * 4935 * 3598 4965 2168 2909 2106 * * 26 65 * 4506 * * 1564 596 4900 0 2223 Q 27 4079 * * 4732 * 4323 4695 * 5278 * * 4062 4073 1853 * 3632 1977 4103 * * 27 342 3160 3334 1953 431 * 0 4990 2223 2169 G 28 3586 * * * * 1070 * * * 4603 * * * * * 2065 2642 * * * 28 71 * 4387 * * 526 1710 4855 0 3260 G 29 * * * * * 0 * * * * * * * * * * * * * * 29 47 4959 * 1000 1000 0 * 5476 1000 1677 V 30 4593 * * * * * * 4126 5459 * * * * 3001 5001 * 1369 1577 * * 30 0 * * * * * * 5714 0 0 I 31 * * * * * * * 284 * * * * * * * * * 2485 * * 31 0 * * * * * * 5714 0 0 H 32 4921 * * * * * 1798 * * * * * * 3608 2868 3337 1735 * * 4036 32 0 * * * * * * 5714 0 0 F 33 * * * * 91 * * * * 4996 * * * * * * * 5077 * * 33 0 * * * * * * 5714 0 0 Y 34 * * * * * 5140 4921 4281 3262 5459 * 4898 * * 2314 1923 3340 2812 * 5599 34 0 * * * * * * 5714 0 0 G 35 3635 * * * * 121 * * * * * * * * * * * * * * 35 0 * * * * * * 5714 0 0 Q 36 853 * * 5361 * * * * * * 3112 * * 2871 4850 4189 5366 * * 4163 36 0 * * * * * * 5714 0 0 I 37 * * * * * * * 231 * * * * * * * * * 2756 * * 37 0 * * * * * * 5714 0 0 V 38 * * * * * * * 4850 * * * * * * * * 5459 263 * 3193 38 0 * * * * * * 5714 0 0 E 39 4598 * 3099 728 5586 * 4898 * * * 4754 4123 * * * 5073 * * * 4069 39 0 * * * * * * 5714 0 0 P 40 3948 * 3614 4921 * 4089 * * * * * 5454 910 * * 2976 4165 * * 5394 40 0 * * * * * * 5714 0 0 A 41 2276 * * * * 3129 * * * 4854 * * 1133 4163 * 4418 4898 4252 * * 41 0 * * * * * * 5714 0 0 C 42 * 0 * * * * * * * * * * * * * * * * * * 42 0 * * * * * * 5714 0 0 D 43 3833 * 1937 3312 * * * 5586 * 3959 * 4218 * 2642 4223 5438 3051 4555 * 5102 43 0 * * * * * * 5714 0 0 V 44 5102 * * * 3269 * * 2103 * 4426 4996 3984 * * * 5379 4030 1610 * 3635 44 0 * * * * * * 5714 0 0 S 45 3105 * 3456 3747 * 4754 * * 4548 * * 2238 * 5093 5459 2026 2957 * * * 45 0 * * * * * * 5714 0 0 T 46 3741 * 5366 * 3054 * 4921 3147 * * * * 2988 5001 5361 4334 2972 1979 5486 * 46 0 * * * * * * 5714 0 0 Q 47 4214 * 5461 4123 * 5168 3728 4152 * 5008 * 2945 * 2273 3996 2657 3994 4191 * * 47 0 * * * * * * 5647 0 0 S 48 3759 * 2469 2614 4945 5753 5592 * 5531 5045 * 2820 * 3937 4868 2912 4049 5379 * * 48 49 * 4905 * * * * 5647 0 0 S 49 4907 * 3988 4860 * 4091 * * 3726 * * 1962 * 2085 5489 2586 4215 * * * 49 53 4791 * 0 * * 0 5574 1450 1000 P 50 * * * * * * 3376 * 3754 * 5664 1619 5653 2740 3446 * 2354 * 5192 * 50 29 5670 * 0 * * 0 5574 1000 1000 V 51 2519 * * * 4538 * * 1591 * 4345 4915 * * * * * 5097 1561 * * 51 0 * * * * * 0 5574 0 1000 E 52 3897 * 2759 2040 * * * * 3866 * * 3104 * 3601 * 5116 2378 5456 * 5029 52 0 * * * * 0 * 5574 0 1000 M 53 5667 * * * * * * * * 1895 4070 * * * * 4094 1887 1942 * 3994 53 0 * * * * * * 5647 0 0 N 54 * * 5168 3575 * * 5379 * 4640 * * 3239 * 3100 4410 1494 2326 * * * 54 0 * * * * * * 5647 0 0 C 55 * 0 * * * * * * * * * * * * * * * * * * 55 0 * * * * * * 5647 0 0 P 56 4971 * * 3808 3509 * * * * 2571 5689 * 3902 4601 * 5442 * 5851 2881 1569 56 163 3923 4601 636 1488 * * 5426 1730 0 Q 57 * * 5064 * * * * * 3484 * * 1840 * 3907 1090 3943 * * * * 57 33 5469 * 0 * * 0 5315 1000 1000 N 58 * * 3046 4083 * 2952 5034 * 3884 * * 1179 * 3272 * 5089 * 5791 * * 58 159 4263 4257 709 1364 * 0 5315 1586 1000 G 59 * * 4963 4300 * 610 * * 4864 * * 2697 4841 * * * 4692 * * * 59 60 4606 * 679 1414 1485 638 5277 1549 2314 S 60 * * 5078 2504 * * 3193 * 1342 * * * * 2812 3769 4222 5580 * * * 60 96 3962 * 760 1288 1041 960 5361 1917 1633 I 61 4937 * * * * * * 3399 4854 4630 2093 4569 4689 5002 4597 4835 2939 2393 * 4211 61 55 5924 5581 1000 1000 * 0 5414 1000 1000 P 62 5089 * * 3111 3494 * 4945 5122 2844 5980 * * 5562 1623 * 3663 3891 4120 * * 62 0 * * * * 918 1086 5404 0 1544 G 63 5167 * 4490 * * 4101 * 4671 * * 3535 4498 4574 * 2715 4052 1267 5090 * * 63 70 * 4398 * * * 0 5417 0 1000 K 64 3585 * * 3720 4988 * 4814 * 3610 4768 * 4386 * 2273 3805 2672 2731 5550 * * 64 0 * * * * * 0 5304 0 1741 T 65 5550 * * * * * 4469 * 3856 5611 * 3916 3948 2560 2881 3444 1774 * * 5411 65 0 * * * * 688 1399 5304 0 1741 Y 66 5605 * * * 4642 5097 4946 2465 * 2550 4442 * * 3077 * 4073 3422 3362 * 3167 66 44 5064 * 2322 322 * 0 5417 1000 1000 S 67 4574 * 2165 * * 4831 * * 3746 4862 * 5009 5668 3907 * 1601 3066 5344 * * 67 0 * * * * * 0 5417 0 1000 S 68 * * 5699 * 3138 * * 3096 * 1109 4398 5357 * * 5025 3743 * 4025 * 4387 68 49 4907 * 2000 415 * 0 5417 1000 1000 K 69 4912 * 4463 4004 4907 4504 4584 * 2369 * * 3098 * 2433 3521 3725 3613 * * * 69 80 5344 5108 0 * 0 * 5417 1000 1000 A 70 3601 * 3113 4125 4282 * * * 2529 * 5026 2578 * 2465 5018 4114 * 5549 * 5023 70 25 * 5862 * * 0 * 5386 0 1000 L 71 3294 * 3993 4788 * 4498 5336 4808 * 2039 * 3295 5934 4913 * 2747 3633 3836 * * 71 48 * 4941 * * 0 * 5314 0 1000 M 72 3094 * * * * * * 3767 3433 3711 4226 * 4555 2698 4596 2925 2786 4393 * 5334 72 65 4506 * 0 * 0 * 5239 1388 1000 S 73 5361 * 4245 * * 4320 5617 * 3210 * 5368 5945 4131 1911 4874 2401 3460 4664 * 5198 73 93 6003 4416 0 * * * 5310 1000 0 G 74 2828 * * 3400 5037 2244 5163 * 5582 4838 * * * * 3623 3026 3010 3481 * 5540 74 30 5601 * 0 * 1025 976 5252 1000 1526 N 75 3112 * * 5304 4396 4925 4516 3571 3785 3892 5534 3918 2724 4120 3491 4038 5494 * * 4566 75 41 5155 * 1585 585 * 0 5287 1000 1000 V 76 3238 * 4158 2989 * * 4485 3975 * 3737 4907 5349 3932 3259 5977 2672 5087 3819 * 5164 76 78 4257 * 1261 779 0 * 5287 1602 1000 K 77 4261 * 5821 4466 5100 * 5434 3878 4564 1436 3725 * 5029 3434 5837 4240 5407 5394 4784 * 77 111 4924 4599 0 * * * 5310 1000 0 N 78 * * 5848 4876 5402 * 4905 5780 * 3441 5649 1945 1405 * * 3576 5655 5623 * * 78 108 5074 4564 0 * 904 1102 5293 1000 1620 A 79 2943 * 3642 4733 * 3390 5150 5802 5379 3790 * 2891 4445 2381 4690 4893 4838 * 4858 * 79 0 * * * * 1528 615 5277 0 2062 Q 80 5419 * 3359 4915 * 2849 5412 4852 4211 4743 * 2308 * 2174 * 2897 * * * * 80 55 4731 * 1658 550 964 1037 5266 1576 1620 I 81 * * * * * * 4852 2079 3224 3086 3503 4755 * 4355 2860 4197 3821 4880 4928 * 81 30 5587 * 0 * * 0 5291 1000 1000 A 82 2171 * * * * 1088 * * * * * 4775 * * * 3368 3965 3184 * * 82 0 * * * * 0 * 5291 0 1000 S 83 * * * 2594 5108 * 4949 * 3992 * * 5488 * 4116 4240 1934 1925 5198 * 5320 83 82 4171 * 2062 395 * * 5310 1640 0 V 84 3992 * * * * * * * * * 4022 * * 3606 * 2470 3085 1327 * 3371 84 0 * * * * * * 5310 0 0 K 85 * * 5108 2578 * * 4924 * 3171 * * 4258 * 3110 2879 1584 5512 * * * 85 54 4755 * 1585 585 * * 5310 1000 0 V 86 4446 * * * 2686 * * 3045 * 2077 2550 * * * * 5196 5347 3538 * 2923 86 0 * * * * * * 5287 0 0 Q 87 * * 4910 2602 * * 3049 * 1829 * * 2287 * 3352 3975 4907 * * * * 87 0 * * * * * * 5287 0 0 Y 88 * * * * * * * 5196 * 4925 * * * * * * 4446 * 681 1888 88 70 * 4393 * * * * 5287 0 0 L 89 * * * * * * * 2083 * 1254 3946 * * * 4461 4764 3766 3011 * * 89 0 * * * * 0 * 5233 0 1082 D 90 4925 * 1290 * * * * * 5164 * * 1046 * * * 4446 * * * * 90 0 * * * * * * 5287 0 0 K 91 3679 * 5074 3459 * 3407 * * 1632 * * 3978 2941 3505 * 3285 * * * * 91 0 * * * * * * 5287 0 0 Q 92 2949 * 3327 2192 * 4860 5074 * 5164 * * 4446 * 1721 * 3635 5052 * * * 92 43 * 5074 * * * * 5287 0 0 K 93 5173 * * 3990 * * 2873 * 1308 * * 4381 * 3476 3312 3588 * 4405 * * 93 0 * * * * * 0 5238 0 1000 K 94 4865 * * * * 3774 * * 1524 * * 4854 * 4719 3015 2217 2906 * * * 94 72 * 4360 * * 0 * 5238 0 1000 L 95 * * * 4512 * * * 3061 * 760 3417 4436 * 3880 * * * * * 4707 95 0 * * * * * 0 5218 0 1121 A 96 870 * * * * 1603 * * * * * * 4315 * 4745 * * 4794 * * 96 0 * * * * 0 * 5218 0 1121 V 97 * * 4544 * * * * 1547 * 2758 2750 * * * * * * 1651 * * 97 0 * * * * * * 5263 0 0 M 98 * * * * * * * 3639 * 1740 2251 * * * * * * 1623 * 3546 98 0 * * * * * * 5263 0 0 N 99 * * * 5340 * * * 4544 * * * 2148 * 5292 * 3075 830 * * * 99 0 * * * * * * 5263 0 0 I 100 * * * * * * * 1158 * 3331 * * * * * * * 1235 * 5177 100 0 * * * * * * 5263 0 0 E 101 * * 4316 2769 5132 * * 5474 3028 * * * * 3594 3457 2285 2847 3167 * * 101 0 * * * * * * 5263 0 0 Y 102 * * * * * * 3766 * * * * * * * * * * * * 110 102 0 * * * * * * 5253 0 0 N 103 * * * * * * * * 3202 * * 2020 * 4660 724 * * * * * 103 0 * * 0 * * * 4480 0 0 //