Phyre 2 alignment of P0A832 with d1b8aa1

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Job Description | P0A832
Confidence | 3.57% | Date | Thu Jan 5 11:06:45 GMT 2012
Rank | 78 | Aligned Residues | 24
% Identity | 21% | Template | d1b8aa1
SCOP info | OB-fold | Nucleic acid-binding proteins | Anticodon-binding domain
Resolution | 1.90

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 34 | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | L | A | L | Q | G | W | E | V | K | S | L | R | A | G | K | A | N | I | S | D | S | Y | V | L | L | R | D | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | K | V | A | G | W | . | V | W | E | V | K | D | L | G | . | . | . | G | I | K | F | L | W | I | R | D | R
Template Known Secondary structure |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  | T | . | . | . | T |  |  |  |  |  |  |  |  | T
Template Predicted Secondary structure |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 19 | 20 | . | . | . | . |  | . | . | . | . | . | 30 | . | . |  |  |  | . | . | . | . | . | . | . | 40 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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