BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= batch____
         (160 letters)

Database: uniref50.fasta 
           3,077,464 sequences; 1,040,396,356 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_B5F2A0 SsrA-binding protein n=362 Tax=Proteobacteria Re...   317   9e-86
UniRef50_B0TLG2 SsrA-binding protein n=12 Tax=Proteobacteria Rep...   204   8e-52
UniRef50_A1WX40 SsrA-binding protein n=13 Tax=Gammaproteobacteri...   187   1e-46
UniRef50_Q1LSR7 SsrA-binding protein n=17 Tax=Gammaproteobacteri...   179   2e-44
UniRef50_Q3JBU6 SsrA-binding protein n=47 Tax=Proteobacteria Rep...   171   9e-42
UniRef50_A1WPQ3 SsrA-binding protein n=5 Tax=Proteobacteria RepI...   165   5e-40
UniRef50_A5EXZ5 SsrA-binding protein n=4 Tax=Proteobacteria RepI...   163   1e-39
UniRef50_B8D947 SsrA-binding protein n=4 Tax=Buchnera aphidicola...   159   3e-38
UniRef50_A1TSJ4 SsrA-binding protein n=6 Tax=Proteobacteria RepI...   157   1e-37
UniRef50_Q1H274 SsrA-binding protein n=29 Tax=Bacteria RepID=SSR...   155   3e-37
UniRef50_Q12AT7 SsrA-binding protein n=8 Tax=Burkholderiales Rep...   153   2e-36
UniRef50_A5G3A5 SsrA-binding protein n=5 Tax=Bacteria RepID=SSRP...   147   1e-34
UniRef50_B8H482 SsrA-binding protein n=83 Tax=Proteobacteria Rep...   145   4e-34
UniRef50_A5UPS2 SsrA-binding protein n=171 Tax=Bacteria RepID=SS...   145   4e-34
UniRef50_Q7VRQ2 TmRNA-binding protein n=2 Tax=Candidatus Blochma...   144   1e-33
UniRef50_Q2N9K0 SsrA-binding protein n=85 Tax=cellular organisms...   143   2e-33
UniRef50_Q3MAP3 SsrA-binding protein n=12 Tax=Cyanobacteria RepI...   143   2e-33
UniRef50_UPI00016992A0 SsrA-binding protein n=1 Tax=Endoriftia p...   142   3e-33
UniRef50_A0PYP8 SsrA-binding protein n=125 Tax=Bacteria RepID=SS...   139   3e-32
UniRef50_Q89AM9 SsrA-binding protein n=1 Tax=Buchnera aphidicola...   138   5e-32
UniRef50_B7IP12 SsrA-binding protein n=102 Tax=Bacteria RepID=SS...   136   2e-31
UniRef50_A0FD64 TmRNA-binding protein n=1 Tax=Coxiella endosymbi...   135   3e-31
UniRef50_B2UY12 SsrA-binding protein n=24 Tax=Bacteria RepID=SSR...   135   6e-31
UniRef50_A9WJ45 SsrA-binding protein n=32 Tax=Bacteria RepID=SSR...   134   7e-31
UniRef50_Q72DV1 SsrA-binding protein n=12 Tax=Bacteria RepID=SSR...   134   1e-30
UniRef50_A8SP47 Putative uncharacterized protein n=2 Tax=Bacteri...   131   7e-30
UniRef50_C9KNB2 SsrA-binding protein n=1 Tax=Mitsuokella multaci...   129   3e-29
UniRef50_A9G109 SsrA-binding protein n=1 Tax=Sorangium cellulosu...   129   3e-29
UniRef50_C4Z0S0 SsrA-binding protein n=22 Tax=Bacteria RepID=C4Z...   128   6e-29
UniRef50_B3DV24 TmRNA-binding protein n=1 Tax=Methylacidiphilum ...   127   2e-28
UniRef50_C1F4B8 SsrA-binding protein n=1 Tax=Acidobacterium caps...   127   2e-28
UniRef50_A9NF97 SsrA-binding protein n=1 Tax=Acholeplasma laidla...   126   3e-28
UniRef50_B2V9T6 SsrA-binding protein n=7 Tax=Bacteria RepID=SSRP...   126   3e-28
UniRef50_A7HGZ0 SsrA-binding protein n=8 Tax=Bacteria RepID=SSRP...   125   4e-28
UniRef50_A4J8T4 SsrA-binding protein n=14 Tax=Bacteria RepID=SSR...   125   4e-28
UniRef50_Q04E23 SsrA-binding protein n=4 Tax=Lactobacillales Rep...   124   8e-28
UniRef50_Q8D389 SmpB protein n=1 Tax=Wigglesworthia glossinidia ...   123   2e-27
UniRef50_Q2RLS9 SsrA-binding protein n=8 Tax=Clostridia RepID=SS...   123   2e-27
UniRef50_A6G542 SsrA-binding protein n=2 Tax=Proteobacteria RepI...   121   7e-27
UniRef50_A5FZS6 SsrA-binding protein n=11 Tax=Alphaproteobacteri...   121   7e-27
UniRef50_Q057R8 TmRNA-binding protein n=1 Tax=Buchnera aphidicol...   121   7e-27
UniRef50_Q6Q8U8 Predicted SsrA n=1 Tax=uncultured marine gamma p...   121   8e-27
UniRef50_A8EWH6 SsrA-binding protein n=48 Tax=Epsilonproteobacte...   120   1e-26
UniRef50_A0LGB7 SsrA-binding protein n=7 Tax=Bacteria RepID=SSRP...   120   2e-26
UniRef50_A1KN98 SsrA-binding protein n=62 Tax=Bacteria RepID=SSR...   119   2e-26
UniRef50_C7M112 SsrA-binding protein n=1 Tax=Acidimicrobium ferr...   119   2e-26
UniRef50_D1U5X0 SsrA-binding protein n=2 Tax=Desulfovibrio RepID...   119   2e-26
UniRef50_Q1GDQ2 SsrA-binding protein n=12 Tax=Rhodobacterales Re...   119   3e-26
UniRef50_D2RBT7 SsrA-binding protein n=3 Tax=Bacteria RepID=D2RB...   119   3e-26
UniRef50_A9BF44 SsrA-binding protein n=3 Tax=Bacteria RepID=SSRP...   119   4e-26
UniRef50_Q2GCW3 SsrA-binding protein n=2 Tax=Neorickettsia RepID...   119   4e-26
UniRef50_B2ULK9 SsrA-binding protein n=3 Tax=Verrucomicrobia Rep...   118   8e-26
UniRef50_Q1MRU5 SsrA-binding protein n=5 Tax=Desulfovibrionales ...   118   8e-26
UniRef50_Q03AJ7 SsrA-binding protein n=110 Tax=Bacteria RepID=SS...   117   1e-25
UniRef50_Q2S237 SsrA-binding protein n=1 Tax=Salinibacter ruber ...   117   1e-25
UniRef50_C1ZDG5 SsrA-binding protein n=1 Tax=Planctomyces limnop...   117   2e-25
UniRef50_C0QVL0 SsrA-binding protein n=2 Tax=Brachyspira RepID=C...   116   2e-25
UniRef50_Q4JX42 SsrA-binding protein n=87 Tax=Bacteria RepID=SSR...   116   3e-25
UniRef50_D1BK11 SsrA-binding protein n=20 Tax=Bacteria RepID=D1B...   115   7e-25
UniRef50_C0JZT0 SsrA-binding protein n=1 Tax=uncultured bacteriu...   114   1e-24
UniRef50_B7KVC8 SsrA-binding protein n=25 Tax=cellular organisms...   114   1e-24
UniRef50_Q7UZP2 SsrA-binding protein n=33 Tax=cellular organisms...   114   1e-24
UniRef50_C5JAN1 SsrA-binding protein n=1 Tax=uncultured bacteriu...   114   2e-24
UniRef50_A3PWV5 SsrA-binding protein n=83 Tax=cellular organisms...   112   5e-24
UniRef50_B1MEU3 SsrA-binding protein n=68 Tax=Bacteria RepID=SSR...   112   6e-24
UniRef50_A0QU63 SsrA-binding protein n=25 Tax=Bacteria RepID=SSR...   111   6e-24
UniRef50_Q3ZZ31 SsrA-binding protein n=6 Tax=Bacteria RepID=SSRP...   111   7e-24
UniRef50_C8W8A6 SsrA-binding protein n=5 Tax=Coriobacteriaceae R...   111   8e-24
UniRef50_B2KCF8 SsrA-binding protein n=1 Tax=Elusimicrobium minu...   111   8e-24
UniRef50_Q6MQ46 SsrA-binding protein n=1 Tax=Bdellovibrio bacter...   110   2e-23
UniRef50_C7JH78 Trans-translation helper factor SmpB n=8 Tax=Ace...   109   3e-23
UniRef50_C8PPG5 SsrA-binding protein n=1 Tax=Treponema vincentii...   108   4e-23
UniRef50_Q2ST23 SsrA-binding protein n=4 Tax=Mollicutes RepID=SS...   107   1e-22
UniRef50_Q1IQ53 SsrA-binding protein n=1 Tax=Candidatus Koribact...   107   2e-22
UniRef50_B9XT05 SsrA-binding protein n=1 Tax=bacterium Ellin514 ...   107   2e-22
UniRef50_Q6MAG8 SsrA-binding protein n=4 Tax=Chlamydiales RepID=...   105   4e-22
UniRef50_Q04TV5 SsrA-binding protein n=6 Tax=Leptospira RepID=SS...   105   4e-22
UniRef50_A3ZLQ9 SsrA-binding protein n=2 Tax=Planctomycetaceae R...   104   8e-22
UniRef50_B1VAG4 SsrA-binding protein n=2 Tax=Candidatus Phytopla...   102   3e-21
UniRef50_B2GAM5 SsrA-binding protein n=4 Tax=Bacteria RepID=SSRP...   102   4e-21
UniRef50_Q9Z8K1 SsrA-binding protein n=2 Tax=Chlamydophila pneum...   102   6e-21
UniRef50_C9RKN3 SsrA-binding protein n=1 Tax=Fibrobacter succino...   100   2e-20
UniRef50_Q6YR70 SsrA-binding protein n=3 Tax=Candidatus Phytopla...   100   2e-20
UniRef50_B2S2D1 SsrA-binding protein n=2 Tax=Treponema pallidum ...    99   6e-20
UniRef50_D2PSC9 SsrA-binding protein n=1 Tax=Kribbella flavida D...    97   1e-19
UniRef50_C9LGK2 SsrA-binding protein n=8 Tax=Prevotella RepID=C9...    97   2e-19
UniRef50_Q3ARF1 SsrA-binding protein n=11 Tax=Chlorobiaceae RepI...    97   2e-19
UniRef50_A6DIW5 SsrA-binding protein n=2 Tax=Bacteria RepID=A6DI...    97   2e-19
UniRef50_Q254F5 SsrA-binding protein n=1 Tax=Chlamydophila felis...    97   2e-19
UniRef50_Q0SPD1 SsrA-binding protein n=20 Tax=Borrelia RepID=SSR...    96   4e-19
UniRef50_D2R3D1 SsrA-binding protein n=1 Tax=Pirellula staleyi D...    95   6e-19
UniRef50_Q7UH38 SsrA-binding protein n=1 Tax=Rhodopirellula balt...    95   7e-19
UniRef50_D1VZH7 SsrA-binding protein n=1 Tax=Prevotella timonens...    94   2e-18
UniRef50_Q11TP3 SsrA-binding protein n=36 Tax=Bacteroidetes RepI...    94   2e-18
UniRef50_B1AI43 SsrA-binding protein n=16 Tax=Mycoplasmataceae R...    93   3e-18
UniRef50_A9G6R4 SmpB-like protein n=1 Tax=Sorangium cellulosum '...    93   3e-18
UniRef50_A0M3P0 SsrA-binding protein n=13 Tax=Bacteroidetes RepI...    92   4e-18
UniRef50_C6HYH8 SsrA-binding protein n=1 Tax=Leptospirillum ferr...    92   5e-18
UniRef50_C2D8P0 TmRNA-binding protein n=2 Tax=Coriobacteriaceae ...    92   7e-18
UniRef50_C6SHY7 SsrA-binding protein n=1 Tax=Neisseria meningiti...    92   7e-18
UniRef50_Q7NB37 SsrA-binding protein n=1 Tax=Mycoplasma gallisep...    91   1e-17
UniRef50_Q02A69 SsrA-binding protein n=1 Tax=Candidatus Solibact...    91   1e-17
UniRef50_Q6KI26 SsrA-binding protein n=1 Tax=Mycoplasma mobile R...    91   1e-17
UniRef50_B1GZD8 SsrA-binding protein SmpB n=1 Tax=uncultured Ter...    90   3e-17
UniRef50_Q83N13 SsrA-binding protein n=2 Tax=Tropheryma whipplei...    89   6e-17
UniRef50_C6X237 TmRNA-binding protein SmpB n=2 Tax=Flavobacteria...    89   7e-17
UniRef50_P75043 SsrA-binding protein n=2 Tax=Mycoplasma RepID=SS...    87   2e-16
UniRef50_B7GAQ2 Predicted protein (Fragment) n=3 Tax=Bacillariop...    87   2e-16
UniRef50_A6L927 SsrA-binding protein n=17 Tax=Bacteria RepID=SSR...    85   6e-16
UniRef50_D1NAK5 SsrA-binding protein n=1 Tax=Victivallis vadensi...    85   9e-16
UniRef50_A5IZI0 SsrA-binding protein n=3 Tax=Mycoplasma RepID=SS...    83   3e-15
UniRef50_UPI0001912596 SsrA-binding protein n=1 Tax=Salmonella e...    82   6e-15
UniRef50_B3PM30 SsrA-binding protein n=2 Tax=Mycoplasma RepID=B3...    82   6e-15
UniRef50_B3EUI8 SsrA-binding protein n=4 Tax=Bacteroidetes RepID...    82   7e-15
UniRef50_Q601U1 SsrA-binding protein n=3 Tax=Mycoplasma hyopneum...    79   7e-14
UniRef50_C1D1M8 Putative SsrA-binding protein n=1 Tax=Deinococcu...    77   1e-13
UniRef50_A5KSW6 SsrA-binding protein n=2 Tax=candidate division ...    74   2e-12
UniRef50_A8Z637 SsrA (TmRNA)-binding protein n=2 Tax=Candidatus ...    68   1e-10
UniRef50_Q4A5T2 SsrA-binding protein n=2 Tax=Mycoplasma RepID=SS...    64   1e-09
UniRef50_Q7P475 Small protein B n=1 Tax=Fusobacterium nucleatum ...    62   8e-09
UniRef50_D0N0I1 Putative uncharacterized protein n=1 Tax=Phytoph...    58   9e-08
UniRef50_C7LKD3 SsrA (TmRNA)-binding protein n=1 Tax=Candidatus ...    49   5e-05

>UniRef50_B5F2A0 SsrA-binding protein n=362 Tax=Proteobacteria RepID=SSRP_SALA4
          Length = 160

 Score =  317 bits (812), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 151/160 (94%), Positives = 157/160 (98%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANI DSYV+L+D
Sbjct: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANIGDSYVILKD 60

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GEA+LFGAN TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGR+NREGYTVVALSLYWKN
Sbjct: 61  GEAWLFGANFTPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRINREGYTVVALSLYWKN 120

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           AWCKVKIGVAKGKKQHDKRSD+KEREWQ+DKARIMKNA R
Sbjct: 121 AWCKVKIGVAKGKKQHDKRSDLKEREWQLDKARIMKNAGR 160


>UniRef50_B0TLG2 SsrA-binding protein n=12 Tax=Proteobacteria RepID=SSRP_SHEHH
          Length = 164

 Score =  204 bits (519), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 97/161 (60%), Positives = 125/161 (77%), Gaps = 3/161 (1%)

Query: 1   MTKKKA--HKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLL 58
           M KK A   K  SA+IA NKRA  +Y  EE+ EAGL+L GWEVKS+R GK N+S+SYV L
Sbjct: 1   MAKKNAKNSKNSSASIARNKRATFDYKFEEKLEAGLSLMGWEVKSIRMGKVNLSESYVFL 60

Query: 59  RDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW 118
           R+GEA+LFG  I P+  AS+HVVCDP R+RKLLL ++ELD L G V+R+GY++V +S+YW
Sbjct: 61  REGEAYLFGCTIAPLNTASSHVVCDPLRSRKLLLKRKELDKLQGLVDRKGYSIVPISMYW 120

Query: 119 -KNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
            K AW K++IG+ KGKK+HDKR D K+REWQ++KAR +K A
Sbjct: 121 QKGAWVKIEIGLGKGKKEHDKRDDTKDREWQIEKARTIKKA 161


>UniRef50_A1WX40 SsrA-binding protein n=13 Tax=Gammaproteobacteria RepID=SSRP_HALHL
          Length = 165

 Score =  187 bits (474), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 87/153 (56%), Positives = 121/153 (79%)

Query: 5   KAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAF 64
           K+ K     IALN++A  ++F+EE  EAGLAL+GWEVK+LRA + N+++S+VL+R GEA+
Sbjct: 10  KSKKTEGNVIALNRKAGFDFFVEERLEAGLALEGWEVKALRAKRVNLTESHVLVRRGEAW 69

Query: 65  LFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCK 124
           L G NITP++ ASTH+  DPTRTRKLLL++RE++ L G V+R+GYTVV L LYWK    K
Sbjct: 70  LIGCNITPLSTASTHIHPDPTRTRKLLLHRREINRLIGAVDRDGYTVVPLKLYWKRGRAK 129

Query: 125 VKIGVAKGKKQHDKRSDIKEREWQVDKARIMKN 157
           ++IGVAKGKK+ DKR+D KE++WQ  + R++K+
Sbjct: 130 IEIGVAKGKKKQDKRADKKEQDWQRQRERLLKH 162


>UniRef50_Q1LSR7 SsrA-binding protein n=17 Tax=Gammaproteobacteria RepID=SSRP_BAUCH
          Length = 161

 Score =  179 bits (455), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 93/149 (62%), Positives = 123/149 (82%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
            TI  NKR R+EYFIE+EFEAG++L GWEVKSLRAG  +I+DSY+LL+D EAFL GA + 
Sbjct: 13  TTITQNKRVRYEYFIEQEFEAGISLLGWEVKSLRAGIVHINDSYILLKDSEAFLLGATLR 72

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
           P+ VAS+H++  P R+RKLLL +RELD+L G+V+R+GYT+V +SLYW+N+  K+++G+AK
Sbjct: 73  PLIVASSHILYSPMRSRKLLLRRRELDTLLGKVHRKGYTIVPISLYWRNSLAKIQLGIAK 132

Query: 132 GKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           GKKQ+DKR  IKEREW ++KARI K  HR
Sbjct: 133 GKKQYDKRHCIKEREWLLNKARITKLVHR 161


>UniRef50_Q3JBU6 SsrA-binding protein n=47 Tax=Proteobacteria RepID=SSRP_NITOC
          Length = 189

 Score =  171 bits (432), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 77/144 (53%), Positives = 109/144 (75%)

Query: 13  TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
            IALN++ARH+YFIEE +EAGL L+GWEVKSLRAG+  +++ Y LL+ GE +LFG +++P
Sbjct: 15  VIALNRKARHDYFIEERYEAGLVLEGWEVKSLRAGRVQLNEGYCLLKGGEVWLFGVHLSP 74

Query: 73  MAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKG 132
           +   STH+  DP RTRKLLL+ +EL  L G V R+GY ++ L+LYWK    K++I +AKG
Sbjct: 75  LNTVSTHIHPDPLRTRKLLLHAKELRKLIGAVERKGYALIPLTLYWKRGRVKLEIALAKG 134

Query: 133 KKQHDKRSDIKEREWQVDKARIMK 156
           K+++DKR+  KE+EW   K R++K
Sbjct: 135 KQKYDKRATEKEKEWTRQKERLLK 158


>UniRef50_A1WPQ3 SsrA-binding protein n=5 Tax=Proteobacteria RepID=SSRP_VEREI
          Length = 157

 Score =  165 bits (417), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 83/161 (51%), Positives = 114/161 (70%), Gaps = 5/161 (3%)

Query: 1   MTKKKAHKPGSAT-IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLR 59
           MTKK    P  A+ IA NK+A H+YF+EE +EAG+ L GWEVK+LRAGKA ++D YVL+R
Sbjct: 1   MTKK----PDPASRIADNKKAAHDYFLEERYEAGMVLHGWEVKALRAGKAQLTDGYVLIR 56

Query: 60  DGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK 119
           DGE FL G  +  +  ASTHV  +  RT+KLLL + ++  L G+V ++GYT+V L+L+WK
Sbjct: 57  DGELFLLGCQLQALKTASTHVSPEAARTKKLLLKKDDIRRLIGKVEQKGYTLVPLNLHWK 116

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           N   K +I +A+GK QHDKR+ IKERE + +  R +K+  R
Sbjct: 117 NGVVKCEIALARGKAQHDKRNSIKEREGKREVERALKSRSR 157


>UniRef50_A5EXZ5 SsrA-binding protein n=4 Tax=Proteobacteria RepID=SSRP_DICNV
          Length = 159

 Score =  163 bits (413), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 74/147 (50%), Positives = 111/147 (75%), Gaps = 1/147 (0%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           I  NK+  H+YF+EE FEAG+AL+GWEVK++RAG+  I +SY+L++D + +LFGA I P+
Sbjct: 11  IVTNKKVFHDYFLEEHFEAGIALEGWEVKAVRAGRIQIKESYILVKDQQVYLFGALIHPL 70

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGK 133
           A AS+H+  +  RTRKLLL++ ++  L G   R+GYT++ +SLYWKN + KV + +AKGK
Sbjct: 71  ASASSHIFPEAQRTRKLLLHRYQIAKLIGASERDGYTLMPVSLYWKNGFVKVDVAIAKGK 130

Query: 134 KQHDKRSDIKEREWQVDKARIMKNAHR 160
           K+ DKR   K+++W+  ++RIMK AH+
Sbjct: 131 KEFDKRQVKKDQDWKKTQSRIMK-AHK 156


>UniRef50_B8D947 SsrA-binding protein n=4 Tax=Buchnera aphidicola RepID=SSRP_BUCA5
          Length = 162

 Score =  159 bits (401), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 69/143 (48%), Positives = 105/143 (73%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           I +NK+A + YFIE+ F++GL L+GWE+KS+R+GK NIS+SY++    E +L    I P+
Sbjct: 14  IIINKKAYYNYFIEKVFQSGLVLEGWEIKSIRSGKVNISESYIINDRNEMYLCNCLIEPL 73

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGK 133
            ++S    CDPTR +KLLL++ E+D L  +    GYT+V+LSL+WK +WCK++ G+AKGK
Sbjct: 74  QMSSNRFSCDPTRKKKLLLHKNEIDFLSLKKKNTGYTMVSLSLFWKKSWCKLEFGLAKGK 133

Query: 134 KQHDKRSDIKEREWQVDKARIMK 156
              DKR ++K+REW+ +K +I+K
Sbjct: 134 TAQDKRINLKKREWEQEKLKILK 156


>UniRef50_A1TSJ4 SsrA-binding protein n=6 Tax=Proteobacteria RepID=SSRP_ACIAC
          Length = 157

 Score =  157 bits (397), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 78/156 (50%), Positives = 106/156 (67%), Gaps = 1/156 (0%)

Query: 6   AHKPGSAT-IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAF 64
           A KP + + IA NK+A   YF EE  EAG+ L GWEVK+LR GK  ++D YV++R+GE +
Sbjct: 2   AKKPETLSRIADNKKAAFNYFFEERHEAGMVLHGWEVKALREGKVQLTDGYVVIREGELY 61

Query: 65  LFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCK 124
           L G  I P+  ASTHV  D  RT+KLLL++ E+  L  +V ++GYT+V L+L+W N   K
Sbjct: 62  LIGCQINPLKTASTHVSPDAVRTKKLLLHKDEIKRLTAKVEQKGYTLVPLNLHWTNGRAK 121

Query: 125 VKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
            +I +AKGK +HDKR  IKERE + +  R MK+ HR
Sbjct: 122 CEIALAKGKAEHDKRDTIKEREGKREVERAMKSRHR 157


>UniRef50_Q1H274 SsrA-binding protein n=29 Tax=Bacteria RepID=SSRP_METFK
          Length = 154

 Score =  155 bits (393), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 69/144 (47%), Positives = 107/144 (74%)

Query: 13  TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
           +IA NK+A H+YFIEE++EAG+ L+GWEVK++R  +  + ++YV+++ GE +L G ++TP
Sbjct: 2   SIAQNKKAFHDYFIEEKYEAGIVLEGWEVKAIRENRVQLKEAYVIIQRGEIYLIGCHVTP 61

Query: 73  MAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKG 132
           +  ASTHV  D  RTRKLLL+  ++  L G+V R GYT+V L +++     KV+IG+AKG
Sbjct: 62  LGSASTHVRPDAIRTRKLLLHSEQIAKLIGKVERAGYTLVPLDMHYTRGRIKVQIGLAKG 121

Query: 133 KKQHDKRSDIKEREWQVDKARIMK 156
           KKQ+DKR   KE++W+ +++ +MK
Sbjct: 122 KKQYDKRHSEKEKDWKREQSSLMK 145


>UniRef50_Q12AT7 SsrA-binding protein n=8 Tax=Burkholderiales RepID=SSRP_POLSJ
          Length = 149

 Score =  153 bits (387), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 73/147 (49%), Positives = 103/147 (70%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           IA NK+A   Y IEE FEAG+ L+GWEVKS+R GK  ++D YV++R GE F+ G  I P+
Sbjct: 3   IADNKKAIFNYHIEERFEAGMVLEGWEVKSVREGKVQLTDGYVVIRGGELFIIGCQINPL 62

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGK 133
             ASTHV  D  RT+KLL+++ E+  L G+V ++G+T+V L+++WK    K +IG+AKGK
Sbjct: 63  GTASTHVRPDSVRTKKLLMHKDEIRRLVGKVEQKGFTLVPLNMHWKAGKVKCEIGLAKGK 122

Query: 134 KQHDKRSDIKEREWQVDKARIMKNAHR 160
            +HDKR  IK+RE + +  R MK+  R
Sbjct: 123 GEHDKRDTIKDREGKREVERAMKSRSR 149


>UniRef50_A5G3A5 SsrA-binding protein n=5 Tax=Bacteria RepID=SSRP_GEOUR
          Length = 151

 Score =  147 bits (371), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 73/149 (48%), Positives = 107/149 (71%), Gaps = 5/149 (3%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           I  NK+A H+YFIEE+FEAG+ L+G EVKSLR GKAN++DS+ L+++GEAFL   +I+P 
Sbjct: 6   ICNNKKAYHDYFIEEKFEAGMVLKGTEVKSLRIGKANLNDSFALVKNGEAFLHNLHISPY 65

Query: 74  AVAS--THVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
              +   H   DP R RKLLL+++E+  L+  +  +GYTVV L LY+K+   KV++G+AK
Sbjct: 66  DFGNRENH---DPDRMRKLLLHKKEIGKLFSMIREQGYTVVPLRLYFKDGLVKVEVGLAK 122

Query: 132 GKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           GKK +DKR D+K+++ + D A  +K  +R
Sbjct: 123 GKKLYDKREDMKKKDMRRDVAVALKERNR 151


>UniRef50_B8H482 SsrA-binding protein n=83 Tax=Proteobacteria RepID=SSRP_CAUCN
          Length = 152

 Score =  145 bits (366), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 77/147 (52%), Positives = 100/147 (68%), Gaps = 2/147 (1%)

Query: 11  SATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI 70
           S  IA N+RAR +YFIEE FEAG+ L G EVKSLR G+ANI++SY  +   E  L  A+I
Sbjct: 2   SKPIAENRRARFDYFIEETFEAGIMLTGTEVKSLRTGRANIAESYASVEGREIVLINADI 61

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN-AWCKVKIGV 129
            P   A+     +P R RKLLL++R++D L G V REG T+V + LYW +    K+++G+
Sbjct: 62  PPYGHAN-RFNHEPRRHRKLLLHRRQIDKLIGAVQREGRTLVPIKLYWNDKGLAKLEVGL 120

Query: 130 AKGKKQHDKRSDIKEREWQVDKARIMK 156
           AKGKK HDKR    ER+WQ DKAR+MK
Sbjct: 121 AKGKKLHDKRDTAAERDWQRDKARLMK 147


>UniRef50_A5UPS2 SsrA-binding protein n=171 Tax=Bacteria RepID=SSRP_ROSS1
          Length = 158

 Score =  145 bits (366), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 71/148 (47%), Positives = 102/148 (68%)

Query: 13  TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
            +A N++ARH+YFIEE +EAG+AL G E+KS+RAG+ N+   YV + DGEA+L+  +I P
Sbjct: 10  VVADNRKARHDYFIEETYEAGIALTGSEIKSIRAGQVNLRGGYVRIVDGEAWLYDVHIAP 69

Query: 73  MAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKG 132
              +  +   +PTR RKLLL++RE+  + G+V R+GYT+V L LY +    KV+IG+A+G
Sbjct: 70  YEQSGAYFNHEPTRPRKLLLHRREISRIAGQVERQGYTLVPLRLYLRGRRAKVEIGLARG 129

Query: 133 KKQHDKRSDIKEREWQVDKARIMKNAHR 160
           KK +DKR DI  RE + D  R +K   R
Sbjct: 130 KKLYDKRDDIARREARRDIERALKERTR 157


>UniRef50_Q7VRQ2 TmRNA-binding protein n=2 Tax=Candidatus Blochmannia
           RepID=Q7VRQ2_BLOFL
          Length = 148

 Score =  144 bits (362), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 70/146 (47%), Positives = 100/146 (68%), Gaps = 7/146 (4%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI--- 70
           I  NKR  H+YFIE+E E GL L GWEVKS+R+ K  I +SYV LRD EA++  AN    
Sbjct: 3   IIQNKRVHHKYFIEKEIETGLVLLGWEVKSIRSRKITIENSYVSLRDQEAYMCNANFQIQ 62

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVA 130
           T M V++     DPTR RKLLL ++EL  L   ++++ YT++ L+L+WKN+W K  IG+A
Sbjct: 63  TNMNVSTP----DPTRMRKLLLKKQELSFLTEIMHKKSYTIIILNLFWKNSWIKANIGIA 118

Query: 131 KGKKQHDKRSDIKEREWQVDKARIMK 156
           KGKK++DKR  +   +W++++  I+K
Sbjct: 119 KGKKKYDKRHIVNTHQWKLEQKHIIK 144


>UniRef50_Q2N9K0 SsrA-binding protein n=85 Tax=cellular organisms RepID=SSRP_ERYLH
          Length = 160

 Score =  143 bits (361), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 74/146 (50%), Positives = 107/146 (73%), Gaps = 2/146 (1%)

Query: 13  TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
           T+A N+RAR +Y +E++FEAG+ALQG EVK+LRAG+A+I++SY  +RDGEA+L  ANI P
Sbjct: 14  TVAENRRARFDYAVEDKFEAGIALQGTEVKALRAGEASIAESYAEVRDGEAWLINANI-P 72

Query: 73  MAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN-AWCKVKIGVAK 131
                  +   P R RKLLL+ RE++ L G V R+G T+V LS+Y+ +    KV++ +AK
Sbjct: 73  EYSHGNRLNHQPRRPRKLLLHNREIERLLGAVERKGMTLVPLSIYFNSRGRAKVELALAK 132

Query: 132 GKKQHDKRSDIKEREWQVDKARIMKN 157
           G++  DKR  IK+R+W+ DKARIM++
Sbjct: 133 GRQAQDKREYIKDRDWKRDKARIMRD 158


>UniRef50_Q3MAP3 SsrA-binding protein n=12 Tax=Cyanobacteria RepID=SSRP_ANAVT
          Length = 155

 Score =  143 bits (361), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 72/145 (49%), Positives = 96/145 (66%)

Query: 13  TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
            I  N++AR+ Y I E FEAG+ L G EVKS+RAGK N+ D Y LLRDGE +L  A+I+P
Sbjct: 10  VITDNRQARYLYEILETFEAGIQLTGTEVKSIRAGKVNLQDGYALLRDGEIWLINAHISP 69

Query: 73  MAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKG 132
              +  +   +P RTRKLLL+++E+  L G+V ++G T+V L +Y K  W KV I + KG
Sbjct: 70  YNASGQYFNHEPRRTRKLLLHRQEIRKLIGKVEQQGLTLVPLKMYLKRGWVKVSIALGKG 129

Query: 133 KKQHDKRSDIKEREWQVDKARIMKN 157
           KK HDKR  +K R+ Q D  R MKN
Sbjct: 130 KKLHDKRESLKRRQDQRDIQRAMKN 154


>UniRef50_UPI00016992A0 SsrA-binding protein n=1 Tax=Endoriftia persephone
           'Hot96_1+Hot96_2' RepID=UPI00016992A0
          Length = 148

 Score =  142 bits (358), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 61/105 (58%), Positives = 88/105 (83%)

Query: 13  TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
           TIALNK+A+H+YFIEE +EAG+AL+GWEVKSLRAG+ N++++YV++  GEA+LFGANI+P
Sbjct: 16  TIALNKKAKHDYFIEERYEAGVALEGWEVKSLRAGRINLTEAYVIINKGEAYLFGANISP 75

Query: 73  MAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLY 117
           +   S+H+  +PTR RKLLL++ EL+ L G V R+G+T+V  ++Y
Sbjct: 76  LPTVSSHIQPNPTRNRKLLLHRTELNKLIGLVERKGFTLVPTAMY 120


>UniRef50_A0PYP8 SsrA-binding protein n=125 Tax=Bacteria RepID=SSRP_CLONN
          Length = 157

 Score =  139 bits (350), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 71/148 (47%), Positives = 99/148 (66%), Gaps = 1/148 (0%)

Query: 13  TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
           T+A N++A H+YFIEE FEAG+AL G EVKS+R GKAN+ DSY  +R+GE F+   +++P
Sbjct: 10  TLAQNRKAYHDYFIEETFEAGIALVGTEVKSIRGGKANLKDSYASIRNGEVFVCNMHVSP 69

Query: 73  MAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKG 132
               +     DP R RKLLL++ ++++L G   ++GYT++ LSLY KN   KV +GVAKG
Sbjct: 70  YEQGNI-FNRDPLRERKLLLHKSQINTLLGYTAQQGYTLIPLSLYLKNGRVKVALGVAKG 128

Query: 133 KKQHDKRSDIKEREWQVDKARIMKNAHR 160
           KK +DKR  I  +  + D  R MK   R
Sbjct: 129 KKNYDKRDAIAAKAAKRDIDRQMKERMR 156


>UniRef50_Q89AM9 SsrA-binding protein n=1 Tax=Buchnera aphidicola (Baizongia
           pistaciae) RepID=SSRP_BUCBP
          Length = 158

 Score =  138 bits (348), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 63/156 (40%), Positives = 102/156 (65%), Gaps = 2/156 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M +    KP    I +N++A++ + I+E FEAG+ L GWEVKS+R GK NIS+SY+ L++
Sbjct: 1   MKRNSNRKPNE--ICINRKAKYSFSIKETFEAGIVLLGWEVKSVRCGKINISNSYISLKN 58

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GE +L  +   P++ ++ ++  +  R +K+LL +RE+  LY ++ +   T++ LS+++K 
Sbjct: 59  GEMYLVNSQFDPISKSNLYITYECNRIKKILLRKREITYLYSKLYKSHLTIIVLSIFFKK 118

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMK 156
            WCKVKIG+AKGK   DKR   K  EW+  + R +K
Sbjct: 119 QWCKVKIGIAKGKTIKDKREHKKLSEWKKTQNRFVK 154


>UniRef50_B7IP12 SsrA-binding protein n=102 Tax=Bacteria RepID=SSRP_BACC2
          Length = 155

 Score =  136 bits (342), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 66/145 (45%), Positives = 98/145 (67%), Gaps = 1/145 (0%)

Query: 13  TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
            IA NK+A H+YFIEE +EAGL LQG E+KS+RAG+ N+ D++  + +GE ++   +I  
Sbjct: 8   VIAQNKKAFHDYFIEETYEAGLVLQGTEIKSIRAGRVNLKDAFARIHNGEVWVHNMHINT 67

Query: 73  MAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKG 132
                     DP RTRKLLL+++E+D L G     GY +V L +Y KN + K+ +G+AKG
Sbjct: 68  YE-QGNRFNHDPLRTRKLLLHKKEIDKLAGAAKETGYALVPLRIYLKNGFAKMALGLAKG 126

Query: 133 KKQHDKRSDIKEREWQVDKARIMKN 157
           KKQ+DKR D+KE+E + + AR+ ++
Sbjct: 127 KKQYDKRHDLKEKEAKREIARVFRD 151


>UniRef50_A0FD64 TmRNA-binding protein n=1 Tax=Coxiella endosymbiont of Amblyomma
           americanum RepID=A0FD64_9COXI
          Length = 154

 Score =  135 bits (341), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 89/135 (65%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           I LNK+  H+Y+IE+  EAGL L+ WE+KS+RAG   + +SYV+ +  EA+L G + +P 
Sbjct: 9   IVLNKKTFHDYYIEQRLEAGLVLESWEIKSIRAGHIQLRNSYVIFKSREAWLIGVHCSPP 68

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGK 133
           +  + HV  DP R+RKLLLN+ E+D L   V ++  TVV L L+W     K ++ + +GK
Sbjct: 69  SNIAYHVKPDPKRSRKLLLNKHEIDRLLSTVQKKRLTVVPLDLHWYKNHVKTEVALVRGK 128

Query: 134 KQHDKRSDIKEREWQ 148
           + HDKR  IK REW+
Sbjct: 129 RMHDKRETIKRREWE 143


>UniRef50_B2UY12 SsrA-binding protein n=24 Tax=Bacteria RepID=SSRP_CLOBA
          Length = 156

 Score =  135 bits (339), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 69/153 (45%), Positives = 100/153 (65%), Gaps = 1/153 (0%)

Query: 8   KPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFG 67
           K  S T+A N++ARHEYFIEE  EAG+AL G EVKS+R G+AN+ +SY  +R+GE F+  
Sbjct: 4   KKSSNTLAENRKARHEYFIEETIEAGIALVGTEVKSIRNGRANLKESYADIRNGEIFILS 63

Query: 68  ANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKI 127
            +I+P    +   V +P R +KLLL++ E+  L G V+R+GYT++ L+LY K    KV +
Sbjct: 64  MHISPYEQGNIFNV-EPLREKKLLLHKSEIHRLAGLVSRDGYTLIPLTLYLKAGKVKVAL 122

Query: 128 GVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           G+ KGKK +DKR  + E+    +  R +K   R
Sbjct: 123 GICKGKKDYDKRDSMLEKAHNREMQRALKERSR 155


>UniRef50_A9WJ45 SsrA-binding protein n=32 Tax=Bacteria RepID=SSRP_CHLAA
          Length = 160

 Score =  134 bits (338), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 100/158 (63%), Gaps = 2/158 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           MT  K   PG   +A N++ARH+Y IEE  EAG+ L G E+KS+RAG+ N+  S+  + D
Sbjct: 1   MTATKHKHPG--VVAENRKARHDYDIEETIEAGIVLSGSEIKSVRAGRVNLRGSFARVID 58

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
            E FL+ A+I P   +  +   DP R RKLLL++RE++ L G V  +G T+V L +Y+K 
Sbjct: 59  DEVFLYDAHIAPYEQSGKYFNHDPMRPRKLLLHRREINRLNGLVRMKGMTLVPLKVYFKG 118

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
              KV++GVA+GKK +DKR DI  R+   D  R +K A
Sbjct: 119 RRAKVELGVARGKKIYDKREDIARRDAARDIDRALKRA 156


>UniRef50_Q72DV1 SsrA-binding protein n=12 Tax=Bacteria RepID=SSRP_DESVH
          Length = 154

 Score =  134 bits (336), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 74/153 (48%), Positives = 94/153 (61%), Gaps = 4/153 (2%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M+KK    PG+  IA NK+ARH Y + +  EAG++L G EVKSLRAG  N  DSYV  R+
Sbjct: 1   MSKKA---PGANVIAQNKKARHIYELSDNHEAGISLTGSEVKSLRAGHVNFRDSYVDFRN 57

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GEAFL G +I P   A  +   DP R RKLLL+  E+++L   V ++GYTVV   LY+  
Sbjct: 58  GEAFLVGLHIAPYDNAG-YAQHDPDRDRKLLLHAHEIENLARSVEQKGYTVVPTKLYFAR 116

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKAR 153
              KV I V +GKK HD+R D+K R    D  R
Sbjct: 117 GKVKVDIAVGRGKKLHDQREDLKRRAEDRDTQR 149


>UniRef50_A8SP47 Putative uncharacterized protein n=2 Tax=Bacteria
           RepID=A8SP47_9FIRM
          Length = 156

 Score =  131 bits (329), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 66/151 (43%), Positives = 102/151 (67%), Gaps = 1/151 (0%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
           G+  IA NK+A HEYFIEE+FEAG+ L G EVKS+R G  +I +++V +  GE +++  N
Sbjct: 6   GNTLIANNKKAYHEYFIEEKFEAGIELVGTEVKSIRQGHCSIKEAFVGIDHGEVYVYRMN 65

Query: 70  ITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGV 129
           + P    +     DP RTRKLLL++ E++ L G+   +GYT++ L +Y K+   K++IG+
Sbjct: 66  VNPYERGNI-FNKDPLRTRKLLLHRYEINKLIGQQKVKGYTIMPLKVYIKDGLVKMEIGL 124

Query: 130 AKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           AKGKK +DKR DI +++ + +  R +KN +R
Sbjct: 125 AKGKKLYDKREDIAKKDMKREMERDLKNRNR 155


>UniRef50_C9KNB2 SsrA-binding protein n=1 Tax=Mitsuokella multacida DSM 20544
           RepID=C9KNB2_9FIRM
          Length = 157

 Score =  129 bits (324), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 63/151 (41%), Positives = 99/151 (65%), Gaps = 1/151 (0%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
           G  T+  N++ARH+YFI E +EAG+ALQG EVKSLRAG+AN+ DSY  +++GE F+   +
Sbjct: 7   GIKTVCENRKARHDYFIHETYEAGIALQGTEVKSLRAGRANLKDSYASIQNGEIFVENLH 66

Query: 70  ITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGV 129
           I+P    +     DP R RKLL+++ E+  L+ +   +G+T+V L +Y+K    K++I +
Sbjct: 67  ISPYDQGNI-FNHDPLRRRKLLMHKAEIVKLFAKTREKGFTLVPLKIYFKQGRAKMEIAL 125

Query: 130 AKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           A GK  +DKR D+ E+  + +  R +K+  R
Sbjct: 126 ASGKHNYDKRQDLHEKAAKREIERALKDRQR 156


>UniRef50_A9G109 SsrA-binding protein n=1 Tax=Sorangium cellulosum 'So ce 56'
           RepID=SSRP_SORC5
          Length = 162

 Score =  129 bits (324), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 72/149 (48%), Positives = 99/149 (66%), Gaps = 5/149 (3%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M K+KA +PG   IA NKRA   Y + + FEAG+ L+G EVK LRAGKA+++DS+  +  
Sbjct: 1   MPKEKA-RPGETLIARNKRAGFNYDLGDRFEAGIVLKGSEVKMLRAGKADLTDSFCTVLR 59

Query: 61  GEAFLFGANITPMAVAS-THVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK 119
           GE FL G +I  MA A+  HV   P   RKLLL++RE++ +   + REG T VA  LY+K
Sbjct: 60  GEVFLHGVSIAAMASAAFGHV---PKGARKLLLHRREIERIDLSIAREGMTAVATRLYFK 116

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQ 148
           +   KV+I +A+GKK HDKR  IKE++ +
Sbjct: 117 SGLAKVEIALARGKKSHDKRETIKEQDAE 145


>UniRef50_C4Z0S0 SsrA-binding protein n=22 Tax=Bacteria RepID=C4Z0S0_EUBE2
          Length = 164

 Score =  128 bits (321), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 1/155 (0%)

Query: 5   KAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAF 64
           K    G+  IA NK+A  +YFIEE++EAG+ L G EVKS+RAGK +I +SY+ + +GE +
Sbjct: 8   KTSASGNRLIANNKKAYFDYFIEEKYEAGMVLHGTEVKSIRAGKCSIKESYIKIENGEVY 67

Query: 65  LFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCK 124
           + G NITP    +     DP R +KLLL++ +++ L G +  +GYT+V L +Y K    K
Sbjct: 68  VLGMNITPYEKGNI-FNKDPLRPKKLLLHKNQINKLTGELTIKGYTLVPLQVYLKEGKVK 126

Query: 125 VKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
           ++IG+ KGKK  DKR  I +++   D  +  KN +
Sbjct: 127 MEIGLGKGKKNFDKRDSIAKKDQIRDAQKEFKNKN 161


>UniRef50_B3DV24 TmRNA-binding protein n=1 Tax=Methylacidiphilum infernorum V4
           RepID=B3DV24_METI4
          Length = 152

 Score =  127 bits (318), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 98/143 (68%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           + +N+RAR +Y I +  EAG+ L G EVKSL+AGK ++  ++  + +GEAFL+  NI+P 
Sbjct: 5   LVVNRRARKDYQILKTLEAGIVLLGSEVKSLKAGKGSLEGAFARVENGEAFLYQMNISPY 64

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGK 133
             A+++ + DP   RKLLL+++E+  L G ++R+G T+V L LY++    KV +G+A G+
Sbjct: 65  EKAASYALRDPKAPRKLLLHKKEIGELAGAISRQGRTIVPLKLYFRRGKIKVLLGIASGR 124

Query: 134 KQHDKRSDIKEREWQVDKARIMK 156
            + DKR  IKE+E Q + +R++K
Sbjct: 125 SKVDKREKIKEQETQREISRVLK 147


>UniRef50_C1F4B8 SsrA-binding protein n=1 Tax=Acidobacterium capsulatum ATCC 51196
           RepID=C1F4B8_ACIC5
          Length = 176

 Score =  127 bits (318), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 64/137 (46%), Positives = 94/137 (68%), Gaps = 1/137 (0%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
           G    A N+ A H YF+ E++EAG+AL+G EVKS+R GKAN+ D+Y L++DGEAFL  A+
Sbjct: 26  GERDAAQNRAASHNYFLLEKYEAGVALRGTEVKSIREGKANLKDAYGLIKDGEAFLLNAH 85

Query: 70  ITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGV 129
           I P +  + +   +  RTRKLLLNQ EL  L+G+  ++G+T++   LY++N   K ++ V
Sbjct: 86  IGPYSHGN-YTNHEALRTRKLLLNQTELKKLWGKTQQKGFTLIPTRLYFRNGRVKCELAV 144

Query: 130 AKGKKQHDKRSDIKERE 146
           AKGK+  DKR   ++RE
Sbjct: 145 AKGKQDWDKRETERKRE 161


>UniRef50_A9NF97 SsrA-binding protein n=1 Tax=Acholeplasma laidlawii PG-8A
           RepID=SSRP_ACHLI
          Length = 149

 Score =  126 bits (316), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 66/147 (44%), Positives = 95/147 (64%), Gaps = 1/147 (0%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           I  NK+A  EYFIE++F AG+ LQG EVKS+RAGK +I+++Y+  R+GE F+   +I   
Sbjct: 4   ITQNKKAHFEYFIEQKFVAGIKLQGSEVKSIRAGKCSINEAYITFRNGEVFILNMHIAKF 63

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGK 133
             AS+    + TRTRKLLLN+ E+D L G   R+G T++ L++       KV I +AKGK
Sbjct: 64  D-ASSIFNHEETRTRKLLLNRSEIDKLMGAQTRDGMTIIPLTVELHEGLIKVVIALAKGK 122

Query: 134 KQHDKRSDIKEREWQVDKARIMKNAHR 160
           K  DKR  IKER+ + ++ + +K   R
Sbjct: 123 KLFDKRETIKERDIKREQQQSLKGKMR 149


>UniRef50_B2V9T6 SsrA-binding protein n=7 Tax=Bacteria RepID=SSRP_SULSY
          Length = 152

 Score =  126 bits (316), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/138 (46%), Positives = 95/138 (68%), Gaps = 5/138 (3%)

Query: 13  TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
            +A NK+A H+Y I E++EAG+ L G EVKSLR G  N+ DS+V++ DGEA+L+   I P
Sbjct: 5   VVATNKKAFHDYAILEKYEAGIVLTGSEVKSLREGACNLKDSFVMIEDGEAWLYNCYIAP 64

Query: 73  MAVAST--HVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVA 130
              A+   H   DPTR RKLLL+++E+  L G+V  +G T+V L +Y+KN   KV+I +A
Sbjct: 65  YKPAAKFGH---DPTRKRKLLLHKKEILKLMGKVKEKGLTIVPLRVYFKNGKAKVEIALA 121

Query: 131 KGKKQHDKRSDIKEREWQ 148
           KGK +++KR  +KE++ +
Sbjct: 122 KGKVKYEKREAMKEKDMK 139


>UniRef50_A7HGZ0 SsrA-binding protein n=8 Tax=Bacteria RepID=SSRP_ANADF
          Length = 165

 Score =  125 bits (315), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 64/133 (48%), Positives = 87/133 (65%), Gaps = 1/133 (0%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           +A N+RAR ++ IE+ +EAGL L G EVKSLR G  N+SD+Y L R  E FL    I   
Sbjct: 20  VATNRRARFDFTIEDSWEAGLVLTGSEVKSLREGNVNLSDAYALPRGDELFLVNCRIGEY 79

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGK 133
             A+ H   +P R RKLL+N+ ELD + G++ + GYT+V L LY+K  W KV++G+AKG+
Sbjct: 80  KQAA-HFGHEPLRDRKLLMNRPELDRVKGKIEQRGYTLVPLRLYFKQGWAKVELGLAKGR 138

Query: 134 KQHDKRSDIKERE 146
              D+R  I ERE
Sbjct: 139 SHEDRRHAIAERE 151


>UniRef50_A4J8T4 SsrA-binding protein n=14 Tax=Bacteria RepID=SSRP_DESRM
          Length = 161

 Score =  125 bits (315), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 65/157 (41%), Positives = 99/157 (63%), Gaps = 2/157 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M  K   + G  TI  N+RARHEY + E +EAG+AL G EVKSLRAGKAN+ D++  + +
Sbjct: 1   MAAKATSEKGFKTITDNRRARHEYHVIETYEAGIALSGTEVKSLRAGKANLQDAFARVEN 60

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK- 119
           GE  L+  +I+P          +P RTR+LL++++E+  LYG+V  +G  ++ L +Y+  
Sbjct: 61  GEMMLYNLHISPYE-QGNRFNHEPKRTRRLLMHKQEILRLYGKVREKGLALIPLKVYFNP 119

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMK 156
               KV++ +A+GKK +DKR DI  R+ + D  R M+
Sbjct: 120 RGKVKVQLALAQGKKSYDKRHDIAARDAKRDMDRAMR 156


>UniRef50_Q04E23 SsrA-binding protein n=4 Tax=Lactobacillales RepID=SSRP_OENOB
          Length = 155

 Score =  124 bits (312), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 67/159 (42%), Positives = 98/159 (61%), Gaps = 4/159 (2%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M KK  H      +A N+RA   YFI E +EAG+ L G E+KS+R G+  I D+Y+ +RD
Sbjct: 1   MAKKDKH---DDALARNRRASFNYFIGETYEAGIQLTGTEIKSVRLGQITIGDAYITVRD 57

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
            +AFL  ANI+P    +   V DP R RKLLL+++E+ +L   V++EG T+V L +Y   
Sbjct: 58  QQAFLNNANISPYKQGNQFNV-DPLRRRKLLLHKKEILALDRAVSKEGKTIVPLRVYIVK 116

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
            + K+ I +  GKK +DKR  IKER+ + +  + +KN H
Sbjct: 117 GFAKILIAIGTGKKNYDKRQTIKERDLKRELGKNLKNFH 155


>UniRef50_Q8D389 SmpB protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of
           Glossina brevipalpis RepID=Q8D389_WIGBR
          Length = 160

 Score =  123 bits (308), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/154 (45%), Positives = 106/154 (68%)

Query: 3   KKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGE 62
           KKK  +     I+ NKRA++  +I++E EAGL+L+GWEVKSLR+   +IS SYV L+   
Sbjct: 2   KKKNTEKNFLIISRNKRAKYNTYIKKEMEAGLSLKGWEVKSLRSNNISISTSYVTLKSSS 61

Query: 63  AFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAW 122
           A+L GA        + + + +  R  +LLL++ E++SL+G V  +GY++V +SLYWK   
Sbjct: 62  AYLTGAVFQSNTNNNMNFIYEKERNIQLLLHKHEINSLFGYVKIKGYSIVVISLYWKYHK 121

Query: 123 CKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMK 156
            K+KIG+AKGKK+ DKR +IK+REW++ K+R+ K
Sbjct: 122 AKLKIGIAKGKKKIDKRLEIKKREWEIKKSRLFK 155


>UniRef50_Q2RLS9 SsrA-binding protein n=8 Tax=Clostridia RepID=SSRP_MOOTA
          Length = 155

 Score =  123 bits (308), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 62/141 (43%), Positives = 93/141 (65%), Gaps = 2/141 (1%)

Query: 17  NKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVA 76
           N+RARH+YFIEE +EAG+AL G EVKSLR G+ANI DSY  + +GE  L   +I+P    
Sbjct: 11  NRRARHDYFIEETYEAGIALTGTEVKSLRNGRANIKDSYARVENGELILHDMHISPYE-Q 69

Query: 77  STHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-KNAWCKVKIGVAKGKKQ 135
                 +P R R+LL+++ E+  LYG+V  +G T++ L +Y+ +    KV++ + KGK+ 
Sbjct: 70  GNRFNHEPRRPRRLLMHRYEIQRLYGKVREKGLTLIPLKVYFNERGLAKVELALVKGKRL 129

Query: 136 HDKRSDIKEREWQVDKARIMK 156
           +DKR DI  R+ Q + AR ++
Sbjct: 130 YDKREDIAARDAQREIARALR 150


>UniRef50_A6G542 SsrA-binding protein n=2 Tax=Proteobacteria RepID=A6G542_9DELT
          Length = 159

 Score =  121 bits (304), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 67/153 (43%), Positives = 96/153 (62%), Gaps = 6/153 (3%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
           G   +  N++A H+Y I EE E+G+ALQG EVKS+R G+ ++ ++Y   R  E FL  A+
Sbjct: 11  GDEVLEENRKATHDYEILEELESGVALQGSEVKSIRDGRISLKEAYCQFRGDELFLLQAH 70

Query: 70  IT--PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKI 127
           I   P A A  H    P R RKLLL++RELD L+  V  +G T+V L +Y K+   K+ I
Sbjct: 71  IAEFPQAHARNH---PPLRARKLLLHRRELDKLHDAVKTQGLTIVPLVVYLKSRRIKILI 127

Query: 128 GVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           G+ +GKK HDKR+ IKER+ + +  R ++  HR
Sbjct: 128 GLGRGKKVHDKRAAIKERDQKREMQRALRE-HR 159


>UniRef50_A5FZS6 SsrA-binding protein n=11 Tax=Alphaproteobacteria RepID=SSRP_ACICJ
          Length = 159

 Score =  121 bits (304), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 64/144 (44%), Positives = 93/144 (64%), Gaps = 2/144 (1%)

Query: 15  ALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMA 74
           A N++AR  Y I++  EAG+ L+G EVKSLR G+A +S+++   RDGE +LF   I P  
Sbjct: 16  AQNRKARFNYTIKDTVEAGIVLRGAEVKSLRMGRATLSEAFAGERDGEMYLFNMYI-PEY 74

Query: 75  VASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NAWCKVKIGVAKGK 133
                   D    RKLLL ++++D L G + R+G TVV L +++      KV +G+A+G+
Sbjct: 75  QGGVLSRFDTKGPRKLLLKRKQIDQLLGAIARQGSTVVPLDVHFNPRGLAKVTLGIAEGR 134

Query: 134 KQHDKRSDIKEREWQVDKARIMKN 157
           KQHDKR  I +R+W+ DKARI+KN
Sbjct: 135 KQHDKRQAIAKRDWERDKARILKN 158


>UniRef50_Q057R8 TmRNA-binding protein n=1 Tax=Buchnera aphidicola str. Cc (Cinara
           cedri) RepID=Q057R8_BUCCC
          Length = 156

 Score =  121 bits (304), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 52/135 (38%), Positives = 85/135 (62%)

Query: 22  HEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVASTHVV 81
           + ++I+++F +G+ LQGWEVKS+RAG   ISD +V++++ E +L      P+   S    
Sbjct: 17  YNFYIKKKFISGIELQGWEVKSIRAGHVQISDGHVIIKNNEVYLTNVQFQPLIYTSDLKF 76

Query: 82  CDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSD 141
           C   R RKLLL ++E+  L     ++GYT+V + L+W  +WCK+KI + KGK + DKR D
Sbjct: 77  CLSNRVRKLLLKKKEIFFLKMYSIKKGYTIVPIKLFWIKSWCKIKIALVKGKSKMDKRQD 136

Query: 142 IKEREWQVDKARIMK 156
            +   W++++  I K
Sbjct: 137 KRNNSWKIERDTIFK 151


>UniRef50_Q6Q8U8 Predicted SsrA n=1 Tax=uncultured marine gamma proteobacterium
           EBAC20E09 RepID=Q6Q8U8_9GAMM
          Length = 156

 Score =  121 bits (303), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 61/154 (39%), Positives = 96/154 (62%), Gaps = 3/154 (1%)

Query: 8   KPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFG 67
           K  +  I  NK A   + + E F+AG+ L+GWEVKSLR  K ++ +SYV +R GEA+L G
Sbjct: 3   KEKTVLIVKNKNASRNFKLNESFQAGIVLEGWEVKSLRDSKVDVKNSYVNIRKGEAWLIG 62

Query: 68  ANI-TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVK 126
             I  P ++   ++  D T++RKLLL+++E+  +      +G T V   +YWK+   K  
Sbjct: 63  VKIDIPASLQQENI--DTTKSRKLLLHKKEIAKIERLKGEKGLTCVLTRIYWKDNLIKCD 120

Query: 127 IGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           I + +GKK  D+R DIK+R+W+ D+ RI+KN+ +
Sbjct: 121 IAMGQGKKHRDQREDIKKRDWERDQGRILKNSKK 154


>UniRef50_A8EWH6 SsrA-binding protein n=48 Tax=Epsilonproteobacteria
           RepID=SSRP_ARCB4
          Length = 158

 Score =  120 bits (302), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 55/142 (38%), Positives = 95/142 (66%), Gaps = 1/142 (0%)

Query: 17  NKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVA 76
           NK+A H++ I E  EAG+ L+G EVK++R G+ N+ DS+V +  GE FL  A+I+ ++  
Sbjct: 15  NKKAFHDFTILETLEAGIVLEGSEVKAIREGRVNLKDSFVRIIKGEVFLLNAHISHLSTT 74

Query: 77  STHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNA-WCKVKIGVAKGKKQ 135
            +    D  R+RKLLL+ +++D +Y +V ++G T+VAL LY+ +    K+++  A+GKK 
Sbjct: 75  HSTYRPDERRSRKLLLHSKQIDKMYSKVTKDGITLVALKLYFNDKNMIKIEVATAQGKKL 134

Query: 136 HDKRSDIKEREWQVDKARIMKN 157
           HDKR D+K +  + +  +++K+
Sbjct: 135 HDKREDLKAKTMKRETEQVLKS 156


>UniRef50_A0LGB7 SsrA-binding protein n=7 Tax=Bacteria RepID=SSRP_SYNFM
          Length = 161

 Score =  120 bits (300), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/160 (43%), Positives = 97/160 (60%), Gaps = 8/160 (5%)

Query: 1   MTKKKAHKPGSAT----IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYV 56
           MTK   +KP +A     I  NK+A H+Y I E+FEAG+ L G EVKSLR G+AN+ DSY 
Sbjct: 1   MTK---NKPSTAEKTRLICQNKKAYHDYDILEKFEAGIVLLGTEVKSLREGRANLKDSYA 57

Query: 57  LLRDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSL 116
            +R GE FL G +I+P   AS +   +P R RKLLL+  E+  L G+    G  ++ L L
Sbjct: 58  RVRKGEVFLQGLHISPYTHAS-YNNHEPERVRKLLLHAHEIKRLTGKTQERGLALIPLKL 116

Query: 117 YWKNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMK 156
           Y+     KV++ +A+GKK +DKR  IK +E   +  R+ K
Sbjct: 117 YFSKGKVKVELALAQGKKLYDKRESIKRKEENRELDRLRK 156


>UniRef50_A1KN98 SsrA-binding protein n=62 Tax=Bacteria RepID=SSRP_MYCBP
          Length = 160

 Score =  119 bits (299), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/144 (43%), Positives = 95/144 (65%), Gaps = 1/144 (0%)

Query: 5   KAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAF 64
           K+ + G   +A N++ARH Y I E FEAG+ALQG EVKSLR G+A+++DS+  + DGE +
Sbjct: 3   KSSRGGRQIVASNRKARHNYSIIEVFEAGVALQGTEVKSLREGQASLADSFATIDDGEVW 62

Query: 65  LFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCK 124
           L  A+I P     +    +P R RKLLL++R++D+L G++    + +V LSLY+     K
Sbjct: 63  LRNAHI-PEYRHGSWTNHEPRRNRKLLLHRRQIDTLVGKIREGNFALVPLSLYFAEGKVK 121

Query: 125 VKIGVAKGKKQHDKRSDIKEREWQ 148
           V++ +A+GK+  DKR D+  R+ Q
Sbjct: 122 VELALARGKQARDKRQDMARRDAQ 145


>UniRef50_C7M112 SsrA-binding protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331
           RepID=C7M112_ACIFD
          Length = 171

 Score =  119 bits (299), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 64/148 (43%), Positives = 94/148 (63%), Gaps = 6/148 (4%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
           G   +A N+RARH+Y + E FEAG+ L G EVK++R G   + D+Y  +RDGE FLF A 
Sbjct: 16  GVRVLAQNRRARHDYDVLETFEAGIVLVGSEVKAVREGHVQLRDAYARIRDGELFLFQAV 75

Query: 70  ITPMAVAS---THVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVK 126
           I+P   A+   THV   P   RKLLL++ E+D L GR+ +E  T++ LSLY ++   KV+
Sbjct: 76  ISPYRHATGFGTHVTDRP---RKLLLHRDEIDRLRGRLEQERLTLIPLSLYLRDGLVKVE 132

Query: 127 IGVAKGKKQHDKRSDIKEREWQVDKARI 154
           + +AKG+  +DKR  +  R+ Q +  R+
Sbjct: 133 LALAKGRTLYDKRHVLATRDAQREVERL 160


>UniRef50_D1U5X0 SsrA-binding protein n=2 Tax=Desulfovibrio RepID=D1U5X0_9DELT
          Length = 158

 Score =  119 bits (299), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/160 (41%), Positives = 93/160 (58%), Gaps = 2/160 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M KKK+      TI  NK+AR  Y I E FEAG++L G EVKSLR G     D YV  RD
Sbjct: 1   MAKKKS-TTTPDTIGTNKQARRLYDILETFEAGISLLGSEVKSLRGGHVAFKDGYVQFRD 59

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
             AFL G +I P      +   DP R R+LLL++RE+  L  + +++G TV+ + +Y+  
Sbjct: 60  HSAFLVGVHIAPYEKTGEYDQHDPERPRQLLLHKREILVLKAKSDQKGLTVIPMKMYFSR 119

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
              KV IG+ KGK  H ++ D+K+R+   D AR + + HR
Sbjct: 120 GKIKVLIGLGKGKNVHSRKQDLKDRDIARDTARQLAD-HR 158


>UniRef50_Q1GDQ2 SsrA-binding protein n=12 Tax=Rhodobacterales RepID=SSRP_SILST
          Length = 158

 Score =  119 bits (299), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 67/158 (42%), Positives = 99/158 (62%), Gaps = 3/158 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M K+K   P    IA N+RAR +Y IE++ E G+ L+G EVKSLRAG +NI++SY  + +
Sbjct: 1   MAKQKTD-PNYKVIAENRRARFDYAIEQDLECGIMLEGSEVKSLRAGGSNIAESYAAVEE 59

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GE +L  + I P   A      +  R RKLL++++E+  L+    R+G T+V L LY+ +
Sbjct: 60  GELWLVNSYIAPYEQAKV-FKHEERRRRKLLVSRKEMADLWNATQRKGMTLVPLVLYFNH 118

Query: 121 -AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKN 157
               K+KIG+AKGKK HDKR    +R+W   K R++K+
Sbjct: 119 RGMAKIKIGIAKGKKNHDKREAQAKRDWSRQKQRLLKD 156


>UniRef50_D2RBT7 SsrA-binding protein n=3 Tax=Bacteria RepID=D2RBT7_GARVA
          Length = 165

 Score =  119 bits (298), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 70/155 (45%), Positives = 104/155 (67%), Gaps = 5/155 (3%)

Query: 6   AHKP---GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLL-RDG 61
           A+KP   G+ T+A N++A H+Y IE+ +EAGLAL G EVKSLR G+A++++S+V + R G
Sbjct: 2   ANKPAQDGTVTVAQNRKAHHDYVIEDCYEAGLALTGTEVKSLREGRASLAESFVNIDRRG 61

Query: 62  EAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNA 121
           E +L GANI P  +  T     P R RKLLL+  E+  L  +   +GYTVV L LY+K +
Sbjct: 62  EMWLEGANI-PEYLNGTWNNHAPKRKRKLLLHAAEIAKLSRQTEAKGYTVVPLRLYFKGS 120

Query: 122 WCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMK 156
           + KV+I +A+GKK+ DKR  ++E + + +  R M+
Sbjct: 121 YVKVEIALARGKKEFDKRQALREEQDKREALREMR 155


>UniRef50_A9BF44 SsrA-binding protein n=3 Tax=Bacteria RepID=SSRP_PETMO
          Length = 150

 Score =  119 bits (298), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 63/138 (45%), Positives = 90/138 (65%), Gaps = 2/138 (1%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
            T+A NK+A H+Y I E FEAG++L G EVKS +AGK N  DS+  +  GE  L+  +I+
Sbjct: 2   TTLARNKKATHDYEIIETFEAGISLLGTEVKSSKAGKINFKDSFCKIEKGELILYNVHIS 61

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN-AWCKVKIGVA 130
           P + AS     DP R RKLLL+++E+  L  +V +EG T++ L +Y  N    KVKI +A
Sbjct: 62  PYSGASI-FNHDPERPRKLLLHKKEIRRLQSKVQQEGLTMIPLEIYTNNKGLIKVKIALA 120

Query: 131 KGKKQHDKRSDIKEREWQ 148
           KG K++DKR  I E+E++
Sbjct: 121 KGLKKYDKREKIAEKEYE 138


>UniRef50_Q2GCW3 SsrA-binding protein n=2 Tax=Neorickettsia RepID=SSRP_NEOSM
          Length = 147

 Score =  119 bits (297), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 65/144 (45%), Positives = 98/144 (68%), Gaps = 6/144 (4%)

Query: 13  TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
            IA+NK+AR +Y + +EFEAG+ L G EVK+L+   A++++++V  R  E +L   ++ P
Sbjct: 3   VIAINKKARFDYSLIDEFEAGIVLLGTEVKALKYHSASLNEAFVAFRRFELWLNNMHVPP 62

Query: 73  MAVAS--THVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-KNAWCKVKIGV 129
              AS   HV   PTR+RKLL+++R+L+ + G V  +G T+V LS+Y  +N   KVK  +
Sbjct: 63  YKPASRFNHV---PTRSRKLLVHKRQLNKISGAVRTKGLTLVPLSIYVNENGLIKVKFAL 119

Query: 130 AKGKKQHDKRSDIKEREWQVDKAR 153
           AKGKK+HDKR DIK+R+W   +AR
Sbjct: 120 AKGKKKHDKRQDIKDRDWARKQAR 143


>UniRef50_B2ULK9 SsrA-binding protein n=3 Tax=Verrucomicrobia RepID=B2ULK9_AKKM8
          Length = 152

 Score =  118 bits (295), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 62/148 (41%), Positives = 94/148 (63%), Gaps = 4/148 (2%)

Query: 11  SATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI 70
           S+ I+ NK+AR +Y I + +E G+ L+G EVKS+RAGK NI+DS+  + +G+  L+G +I
Sbjct: 2   SSDISTNKKARRDYEILDTYECGMELKGTEVKSIRAGKVNIADSFARVENGQMLLYGCDI 61

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVA 130
            P   A         R R+LLL++RE+  L  + +++G ++VAL LYWKN   K+ +G+ 
Sbjct: 62  QPWETAGEFFQHQARRPRRLLLHKREIFKLEQQTSQKGCSLVALKLYWKNGKVKLALGLG 121

Query: 131 KGKKQHDKRSDIKE----REWQVDKARI 154
           KGK   D+R D+K     RE Q + ARI
Sbjct: 122 KGKTHRDQRYDLKARVEMREAQREVARI 149


>UniRef50_Q1MRU5 SsrA-binding protein n=5 Tax=Desulfovibrionales RepID=SSRP_LAWIP
          Length = 155

 Score =  118 bits (295), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 63/152 (41%), Positives = 96/152 (63%), Gaps = 1/152 (0%)

Query: 8   KPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFG 67
           K  S  +  N++ARH Y + +  EAG+ L G EVKSLR+G A+  DSYV  + GE ++ G
Sbjct: 4   KKNSHLVFENRKARHLYDLLDFLEAGIVLTGPEVKSLRSGHASFQDSYVDFKQGEGYIVG 63

Query: 68  ANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKI 127
            +I P   A  +V+ +P R RKLLL+++EL  L  +V ++G T+V L LY+KN   K +I
Sbjct: 64  LHIPPYNNAG-YVIQNPDRPRKLLLHRQELKMLASKVEQKGLTIVPLKLYFKNRKVKTEI 122

Query: 128 GVAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
            +AKG+K +D R+++K+R   +D  R +   H
Sbjct: 123 ALAKGRKLYDHRNELKKRAEAMDIKRELAARH 154


>UniRef50_Q03AJ7 SsrA-binding protein n=110 Tax=Bacteria RepID=SSRP_LACC3
          Length = 157

 Score =  117 bits (293), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/156 (41%), Positives = 98/156 (62%), Gaps = 2/156 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M KK   KP +  +A NK+A H+Y I + +EAG+AL G E+KS+R GK N+ D +  +R+
Sbjct: 1   MAKKHRQKPDN-LLAQNKKAGHDYNILDTYEAGIALTGTEIKSVRDGKLNLRDGFARIRN 59

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
            EA+L   +I+P    +   V DP R RKLLL++RE+  L     R+G T+V L +Y K+
Sbjct: 60  NEAWLENVHISPYKEGNLFNV-DPMRNRKLLLHKREIRKLGQMTARQGVTLVPLRMYLKH 118

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMK 156
            + KV IGVA+GK  +DKR  +K ++ + +  R +K
Sbjct: 119 GYAKVLIGVAEGKHNYDKRETLKRKDQEREVQRALK 154


>UniRef50_Q2S237 SsrA-binding protein n=1 Tax=Salinibacter ruber DSM 13855
           RepID=SSRP_SALRD
          Length = 154

 Score =  117 bits (293), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 89/135 (65%), Gaps = 2/135 (1%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLL-RDGEAFLFGA 68
           G+  +A NK+A+ EY IEE  EAGL L+G EVKS+R GKA++  +Y  + R+GE  + G 
Sbjct: 4   GTEVVARNKKAQFEYDIEETLEAGLVLEGSEVKSVRQGKASLDGAYCQVDREGEMKIHGM 63

Query: 69  NITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIG 128
            I P   A      +P R RKLLL+ +++        +EGYT+V LSLY+++ W K+KIG
Sbjct: 64  YIKPYEEAGP-FGHEPRRNRKLLLHDQQIGKWGQMAEQEGYTIVPLSLYFRDGWAKLKIG 122

Query: 129 VAKGKKQHDKRSDIK 143
           +AKG+++HDKR  IK
Sbjct: 123 IAKGRQKHDKRQAIK 137


>UniRef50_C1ZDG5 SsrA-binding protein n=1 Tax=Planctomyces limnophilus DSM 3776
           RepID=C1ZDG5_PLALI
          Length = 160

 Score =  117 bits (292), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 59/144 (40%), Positives = 91/144 (63%), Gaps = 5/144 (3%)

Query: 2   TKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDG 61
           +K +  KP + ++  N+RARHEY + ++ + G+ L G EVKS+RAGK +I +++V ++DG
Sbjct: 5   SKPEDDKPNNISVCRNRRARHEYELMDQLDCGIVLMGSEVKSIRAGKVSIEEAWVRVQDG 64

Query: 62  EAFLFGANIT--PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK 119
           E +L G +I   P A    H   +  RTRKLL ++REL    GR +    T+V L +Y +
Sbjct: 65  ELYLVGCDINEYPQASWLNH---ETKRTRKLLAHRRELKKFCGRTSERSITIVPLEMYLQ 121

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIK 143
             + K+KI +AKG+K HDKR  +K
Sbjct: 122 RGFVKIKIALAKGRKLHDKREKLK 145


>UniRef50_C0QVL0 SsrA-binding protein n=2 Tax=Brachyspira RepID=C0QVL0_BRAHW
          Length = 161

 Score =  116 bits (291), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 94/161 (58%), Gaps = 6/161 (3%)

Query: 1   MTKKKAHKPGSATIAL-----NKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSY 55
           M  KK  K GS TI+      NK+A   Y + E+FEAG+ L G EVKSLR    N+SDSY
Sbjct: 1   MASKKDKKSGSNTISSGEIVKNKKALFNYELVEKFEAGIVLLGTEVKSLRERSVNMSDSY 60

Query: 56  VLLRDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALS 115
              + GE F+   +I+P    + +   +P R RKLL+ +REL  LYG++  +G T++ + 
Sbjct: 61  ASFKKGELFIVNMHISPYHFGNRNN-HEPLRERKLLMKKRELRRLYGKIKEQGLTLIPVK 119

Query: 116 LYWKNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMK 156
           LY+     KV++ +AKGKK HDKR  +K +    +  R +K
Sbjct: 120 LYFSRGKVKVELALAKGKKLHDKRETLKRKTLDREMERYIK 160


>UniRef50_Q4JX42 SsrA-binding protein n=87 Tax=Bacteria RepID=SSRP_CORJK
          Length = 184

 Score =  116 bits (290), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 63/148 (42%), Positives = 95/148 (64%), Gaps = 5/148 (3%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
           G   +A N++ARH+Y I + +E G+ L G EVKSLR GKA++ D+Y  + +GE +L G +
Sbjct: 31  GQIVVATNRKARHDYHIIDTYECGVVLVGTEVKSLREGKASLVDAYATIDEGEVWLRGLH 90

Query: 70  ITPMAVA--STHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKI 127
           I   ++   + H    P RTRKLLL++RE+DSL G+V     T+V L LY+     KV++
Sbjct: 91  IPEYSMGHWTNH---SPRRTRKLLLHRREIDSLMGKVRDGNNTLVPLQLYFVAGKLKVEL 147

Query: 128 GVAKGKKQHDKRSDIKEREWQVDKARIM 155
            +A+GK+++DKR DIK R  + +  R M
Sbjct: 148 ALARGKQEYDKRQDIKRRTEEREITREM 175


>UniRef50_D1BK11 SsrA-binding protein n=20 Tax=Bacteria RepID=D1BK11_SANKS
          Length = 176

 Score =  115 bits (287), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 61/138 (44%), Positives = 93/138 (67%), Gaps = 1/138 (0%)

Query: 9   PGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGA 68
           P  A IA NK+ARH++ IE+ FEAG+ L G EVK+LRAG+A++ D YV +   EA+L GA
Sbjct: 25  PVRALIASNKKARHDFAIEDVFEAGMVLSGTEVKALRAGRASLVDGYVNIEGNEAWLEGA 84

Query: 69  NITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIG 128
           +I+  A   T     P R RKLLL++ E++ L      +G+T+V L +Y+ +   KV+I 
Sbjct: 85  HISEYA-HGTWTNHAPRRKRKLLLHRSEIERLAQGTREKGFTIVPLQMYFLDGRAKVEIA 143

Query: 129 VAKGKKQHDKRSDIKERE 146
           +A+GKK++DKR  ++E++
Sbjct: 144 LARGKKEYDKRQTLREQQ 161


>UniRef50_C0JZT0 SsrA-binding protein n=1 Tax=uncultured bacterium URE12
           RepID=C0JZT0_9BACT
          Length = 163

 Score =  114 bits (284), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 1/147 (0%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           IA N++ARH+Y IE+  EAGLAL+G EVKSLR     I+ ++  +     +L+G  I+P 
Sbjct: 17  IATNRKARHDYLIEDTIEAGLALEGPEVKSLRLKHCVITSAFARVEPRGVYLYGMQISPY 76

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGK 133
           A  +T    DP RTRKLLL + E+  L   V  +G  +VAL +Y+K  W KV IG+ +GK
Sbjct: 77  AF-NTLTQLDPVRTRKLLLKKTEIRRLSRAVEIKGMALVALEVYFKRGWAKVLIGLGRGK 135

Query: 134 KQHDKRSDIKEREWQVDKARIMKNAHR 160
           K  DK+  IK+R+   +  R  K  ++
Sbjct: 136 KAADKKETIKKRDIDREMRRDFKEKYK 162


>UniRef50_B7KVC8 SsrA-binding protein n=25 Tax=cellular organisms RepID=SSRP_METC4
          Length = 157

 Score =  114 bits (284), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/150 (44%), Positives = 96/150 (64%), Gaps = 2/150 (1%)

Query: 9   PGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGA 68
           PG   +A N+ AR+ Y IE+  EAG+AL G EVKSLR GKA I +SY      +  LF A
Sbjct: 7   PGRRVVADNRSARYHYAIEDTLEAGIALTGTEVKSLRGGKATIGESYAGPSGNDLMLFNA 66

Query: 69  NITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN-AWCKVKI 127
            I P  + +     D  R R+LLL++R+++ L G   R+GYTV+ L +Y+ +    KV++
Sbjct: 67  YI-PEYLEANRFNHDTKRPRRLLLHRRQINKLIGATQRQGYTVIPLKIYFNDKGRAKVEL 125

Query: 128 GVAKGKKQHDKRSDIKEREWQVDKARIMKN 157
           G+ KGK+ HDKR  +K+R+W  DKAR+M++
Sbjct: 126 GLGKGKQLHDKRESVKQRDWDRDKARLMRD 155


>UniRef50_Q7UZP2 SsrA-binding protein n=33 Tax=cellular organisms RepID=SSRP_PROMP
          Length = 175

 Score =  114 bits (284), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 56/130 (43%), Positives = 78/130 (60%)

Query: 17  NKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVA 76
           N+ A+ +Y I E  EAG+ L G EVKS+R G  N+ D Y   RDGE  L   +I+P    
Sbjct: 35  NRYAKFQYEILETIEAGIELLGTEVKSIRNGSVNLRDGYCSFRDGEILLLNVHISPHKNV 94

Query: 77  STHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGKKQH 136
                 DP R RKLLL+++E+  L     ++G T++ LS+Y K +W K+ IG+ KGKK H
Sbjct: 95  GPFFNHDPLRNRKLLLHKKEIVKLKYNTEKKGLTIIPLSIYLKGSWIKLTIGIGKGKKLH 154

Query: 137 DKRSDIKERE 146
           DKR   K+R+
Sbjct: 155 DKRQADKQRD 164


>UniRef50_C5JAN1 SsrA-binding protein n=1 Tax=uncultured bacterium
           RepID=C5JAN1_9BACT
          Length = 153

 Score =  114 bits (284), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 96/147 (65%), Gaps = 4/147 (2%)

Query: 13  TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYV--LLRDGEAFLFGANI 70
            IALNK A+ +Y + E  EAG+ L G+EVKS R G  +I +S+V  +   GE +LF AN 
Sbjct: 5   VIALNKLAKFDYSLLEVIEAGIVLTGFEVKSARLGGISIRESHVGEMQGSGELYLFNANF 64

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-KNAWCKVKIGV 129
            P  + +T +  +P R RKLLL +R+++ L G+V+R+G+T++ + +Y+ +    K++I +
Sbjct: 65  -PEYIHATTMKQEPKRPRKLLLGRRQINKLLGQVHRKGFTIIPVQMYFNEKGIIKIEIAL 123

Query: 130 AKGKKQHDKRSDIKEREWQVDKARIMK 156
           A+GK   DKR  IK REW  +K R++K
Sbjct: 124 AQGKNVVDKRETIKLREWDREKHRVLK 150


>UniRef50_A3PWV5 SsrA-binding protein n=83 Tax=cellular organisms RepID=SSRP_MYCSJ
          Length = 168

 Score =  112 bits (279), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 58/134 (43%), Positives = 88/134 (65%), Gaps = 1/134 (0%)

Query: 13  TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
            +A N+RARH Y I + +EAG+AL G EVKSLR G+A+++D++  + DGE +L   +I P
Sbjct: 19  VVASNRRARHNYAILDTYEAGIALMGTEVKSLRDGQASLADAFATVDDGEIWLRNLHI-P 77

Query: 73  MAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKG 132
                +     P R RKLLL++RE+D+L G++     T+V LSLY+     KV++ +A+G
Sbjct: 78  EYQHGSWTNHAPRRNRKLLLHRREIDNLIGKIRDGNLTLVPLSLYFTGGKVKVELALARG 137

Query: 133 KKQHDKRSDIKERE 146
           K+ HDKR D+  R+
Sbjct: 138 KQAHDKRQDLARRD 151


>UniRef50_B1MEU3 SsrA-binding protein n=68 Tax=Bacteria RepID=SSRP_MYCA9
          Length = 159

 Score =  112 bits (279), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 63/146 (43%), Positives = 92/146 (63%), Gaps = 3/146 (2%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M+KK A   G   IA N++ARH Y I + +EAG+ L G EVK+LR GKA++ D++  + D
Sbjct: 1   MSKKPA--DGRKVIATNRKARHNYSIIDVYEAGVQLVGTEVKTLREGKASLVDAFATVDD 58

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GE +L G +I P     T     P R RKLLL++ ++D L G+      T+V LSLY+ +
Sbjct: 59  GEVWLRGVHI-PQYDHGTWTNHAPLRNRKLLLHRAQIDMLVGKTRDGNLTLVPLSLYFLD 117

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKERE 146
              KV++ +A+GK+ HDKR DI +R+
Sbjct: 118 GKVKVELALARGKQAHDKRQDIAKRD 143


>UniRef50_A0QU63 SsrA-binding protein n=25 Tax=Bacteria RepID=SSRP_MYCS2
          Length = 161

 Score =  111 bits (278), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 59/150 (39%), Positives = 95/150 (63%), Gaps = 6/150 (4%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           MTKK A    +  +A N++ARH Y I + +EAG+ L G EVKSLR G+A+++D++  + D
Sbjct: 1   MTKKSA-SSNNKVVATNRKARHNYTILDTYEAGIVLMGTEVKSLREGQASLADAFATVDD 59

Query: 61  GEAFLFGANITPM--AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW 118
           GE +L   +I        + H    P R RKLLL+++++D+L G++     T+V LS+Y+
Sbjct: 60  GEIWLRNVHIAEYHHGTWTNHA---PRRNRKLLLHRKQIDNLIGKIRDGNLTLVPLSIYF 116

Query: 119 KNAWCKVKIGVAKGKKQHDKRSDIKEREWQ 148
            +   KV++ +A+GK+ HDKR D+  R+ Q
Sbjct: 117 TDGKVKVELALARGKQAHDKRQDLARRDAQ 146


>UniRef50_Q3ZZ31 SsrA-binding protein n=6 Tax=Bacteria RepID=SSRP_DEHSC
          Length = 172

 Score =  111 bits (278), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 56/150 (37%), Positives = 95/150 (63%), Gaps = 1/150 (0%)

Query: 7   HKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLF 66
           H     T+  N++A H YF+EE++EAG+ L G E+KSLR+G+ N+ D+YV  + GE +L 
Sbjct: 18  HMAEYVTLTTNRKAFHNYFLEEKYEAGIMLLGTEIKSLRSGRVNMGDAYVKPQRGELWLV 77

Query: 67  GANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVK 126
            A+I+     S H   +P R RKLL++++E+  L  +V  +G T++ + +Y KN   KV+
Sbjct: 78  NAHISAYE-CSGHTSHEPMRERKLLMHRKEIALLMSKVKEKGLTLIPVRIYLKNDIAKVE 136

Query: 127 IGVAKGKKQHDKRSDIKEREWQVDKARIMK 156
           + + +GKK +DKR  + +R+ + +  R +K
Sbjct: 137 LSLGRGKKLYDKRDTVTKRDTERELEREVK 166


>UniRef50_C8W8A6 SsrA-binding protein n=5 Tax=Coriobacteriaceae RepID=C8W8A6_ATOPD
          Length = 161

 Score =  111 bits (278), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 62/161 (38%), Positives = 99/161 (61%), Gaps = 2/161 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M + +  + G  +IA N+ ARHEY I E FE GL L G EVKSLR     ++D++ L+RD
Sbjct: 1   MAENQVKQQGKKSIARNRSARHEYEIGETFECGLVLTGTEVKSLRERGCQLTDTFCLIRD 60

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-K 119
           GEA++ G ++ P        V DP R RKLLL++R++D L G++ ++G  +V L +Y+ +
Sbjct: 61  GEAWIHGMHLHPYTNGGVWNV-DPDRKRKLLLHRRQIDYLDGKLRQKGLALVPLEIYFDE 119

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           +   K+ I +++GKK +DKR+   +R+   +  R +K   R
Sbjct: 120 HNRVKLLIALSQGKKLYDKRASAAKRDSDREIQRALKERSR 160


>UniRef50_B2KCF8 SsrA-binding protein n=1 Tax=Elusimicrobium minutum Pei191
           RepID=SSRP_ELUMP
          Length = 157

 Score =  111 bits (277), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 54/148 (36%), Positives = 91/148 (61%), Gaps = 1/148 (0%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
           G    A N++A H Y I + +EAG+ L G EVKS+R  + ++  ++V +   +A++F  +
Sbjct: 7   GPLVAATNRKAYHNYHILDTYEAGIELLGSEVKSIRKKEVSLDGAFVRIEGMQAYVFNMH 66

Query: 70  ITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGV 129
           I P    +T    +P R R+LLLN++E++ L G    +G+T++ L +Y+KN W K+K+G+
Sbjct: 67  INPYKY-NTVTEVEPLRQRRLLLNKKEINKLKGHAEIKGHTIIPLEVYFKNGWAKIKVGL 125

Query: 130 AKGKKQHDKRSDIKEREWQVDKARIMKN 157
            KGK+  DKR  IK+R+   +  +  KN
Sbjct: 126 GKGKQLFDKRDAIKKRDLSREMEKDFKN 153


>UniRef50_Q6MQ46 SsrA-binding protein n=1 Tax=Bdellovibrio bacteriovorus
           RepID=SSRP_BDEBA
          Length = 152

 Score =  110 bits (275), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 83/132 (62%), Gaps = 5/132 (3%)

Query: 17  NKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVA 76
           NK+AR +Y I E +EAGL L G EVKSLR     + DSY+  +  EA+L  A+I     +
Sbjct: 11  NKKARFDYTIVETYEAGLQLMGSEVKSLRNKDVQLKDSYISFKGDEAYLQNAHIAEYKAS 70

Query: 77  S--THVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGKK 134
           S   HV   P R RKLL+++ ELD ++  +  +GY+ V L +Y+KN   K++I + KGKK
Sbjct: 71  SYNNHV---PERHRKLLMHRNELDEIFEALREKGYSCVPLKIYFKNGRAKLQIALVKGKK 127

Query: 135 QHDKRSDIKERE 146
            HDKR  IK+R+
Sbjct: 128 THDKREAIKKRD 139


>UniRef50_C7JH78 Trans-translation helper factor SmpB n=8 Tax=Acetobacter
           pasteurianus RepID=C7JH78_ACEP3
          Length = 168

 Score =  109 bits (272), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 91/147 (61%), Gaps = 2/147 (1%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             +A N++AR  Y I E  EAGL L+G EVKSLR G+A I++++   RDG  +LF + I 
Sbjct: 17  GMVAQNRKARFNYNILETIEAGLVLKGAEVKSLRLGRATINEAFAGERDGALWLFNSYI- 75

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN-AWCKVKIGVA 130
           P          D    RKLL++++E+    G + ++G T+V L++++ +    KV +G+ 
Sbjct: 76  PEYQGGVLSRFDTRAPRKLLMHRKEMRKFIGAIAKQGATLVPLNVHFNDRGLAKVTLGLG 135

Query: 131 KGKKQHDKRSDIKEREWQVDKARIMKN 157
            GKK HDKR  I +R+WQ DKAR+++N
Sbjct: 136 VGKKSHDKRQSIADRDWQRDKARLIRN 162


>UniRef50_C8PPG5 SsrA-binding protein n=1 Tax=Treponema vincentii ATCC 35580
           RepID=C8PPG5_9SPIO
          Length = 200

 Score =  108 bits (271), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 60/140 (42%), Positives = 86/140 (61%), Gaps = 1/140 (0%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           IA NK+A  +Y IEE  E G+ALQG E+KS+R G+ +  DS+  +   E +L   +I+  
Sbjct: 55  IAKNKKAHFDYSIEETIECGIALQGTEIKSVRDGRISFPDSFAEIIRNEVWLKNFHISEY 114

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGK 133
            V S+    DP R +KLLL++ E+  L  +   +GYT++ L  Y K    KV +G+ KGK
Sbjct: 115 -VYSSIFNHDPDRPKKLLLHKDEIKRLTRKTEEKGYTLIPLEFYLKRGRIKVMLGICKGK 173

Query: 134 KQHDKRSDIKEREWQVDKAR 153
           KQ DKR+DIKER+ + D  R
Sbjct: 174 KQFDKRADIKERDIKRDMQR 193


>UniRef50_Q2ST23 SsrA-binding protein n=4 Tax=Mollicutes RepID=SSRP_MYCCT
          Length = 148

 Score =  107 bits (267), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 87/135 (64%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           I  NK+A   Y I + ++AG+ L G E+KS+R    +I++++VL+R  E ++   N+   
Sbjct: 6   IVKNKKAYFNYEIIQTYQAGIVLNGPEIKSIRNHDVSINEAFVLIRKKEIYILNMNVKKY 65

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGK 133
             A+     + TRTRKLLL+++E+  +  ++ +E  T++ + LY+KN + K++I +AKGK
Sbjct: 66  QFANYIKGLEETRTRKLLLHKKEIIKILNKIKQENLTIIPIKLYFKNDYVKLEIALAKGK 125

Query: 134 KQHDKRSDIKEREWQ 148
           K HDKR  IK+R+ +
Sbjct: 126 KLHDKRQTIKKRDTE 140


>UniRef50_Q1IQ53 SsrA-binding protein n=1 Tax=Candidatus Koribacter versatilis
           Ellin345 RepID=SSRP_ACIBL
          Length = 175

 Score =  107 bits (266), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 55/130 (42%), Positives = 87/130 (66%), Gaps = 1/130 (0%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
           G    ++N+ A H YF+ +++EAG+AL+G EVKS+R G+AN+ D+Y L+++ E +L  A+
Sbjct: 25  GERDASVNRAASHNYFLLDKYEAGVALRGTEVKSIRDGRANLKDAYGLVKENELWLINAH 84

Query: 70  ITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGV 129
           I P   AS +    P RTRKLL+ +RE+  L     ++G+T++   +Y+KN   KV++ V
Sbjct: 85  IGPYDAASYNNHA-PLRTRKLLVKKREILKLLAASQQKGHTLIPTRMYFKNGRVKVELAV 143

Query: 130 AKGKKQHDKR 139
           AKGK+  DKR
Sbjct: 144 AKGKQLWDKR 153


>UniRef50_B9XT05 SsrA-binding protein n=1 Tax=bacterium Ellin514 RepID=B9XT05_9BACT
          Length = 151

 Score =  107 bits (266), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/135 (42%), Positives = 82/135 (60%), Gaps = 1/135 (0%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
           A I  N +AR +Y I E FEAG+AL+G EVKSLRAG   I+D++  + + + FL+  +I 
Sbjct: 2   ADILSNHKARRDYHILETFEAGIALKGTEVKSLRAGLGQIADAFARVENDQVFLYNVHID 61

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
                +     +P   RKLLL++ E+  L+G  + +G  +  LS YWKN   KV + V K
Sbjct: 62  EYRFGNRQN-HEPKSARKLLLHKSEIRKLFGLASVKGNALFPLSFYWKNGKVKVALAVGK 120

Query: 132 GKKQHDKRSDIKERE 146
           GK + DKR DIK+R+
Sbjct: 121 GKVEFDKRDDIKKRD 135


>UniRef50_Q6MAG8 SsrA-binding protein n=4 Tax=Chlamydiales RepID=SSRP_PARUW
          Length = 153

 Score =  105 bits (263), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 56/139 (40%), Positives = 83/139 (59%), Gaps = 1/139 (0%)

Query: 8   KPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFG 67
           K   + +  N+RA H+Y I E FE G+ LQG E+KS+R   A + D+YV +   E +L G
Sbjct: 2   KDKHSDLVSNRRATHDYEILETFETGIVLQGTEIKSIRDHGATLQDAYVKVIHNELWLIG 61

Query: 68  ANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKI 127
            NI      + H   +  R RKLL+++RE+    G +  +G  ++ L+LY K    KV+I
Sbjct: 62  CNIAHYRFGNIHN-HEEKRDRKLLMHKREIKKCKGAIQEKGLALIPLALYLKQGRIKVRI 120

Query: 128 GVAKGKKQHDKRSDIKERE 146
            +AKGKK  DKR+D+KER+
Sbjct: 121 AIAKGKKSFDKRADLKERD 139


>UniRef50_Q04TV5 SsrA-binding protein n=6 Tax=Leptospira RepID=SSRP_LEPBJ
          Length = 160

 Score =  105 bits (263), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 60/157 (38%), Positives = 99/157 (63%), Gaps = 3/157 (1%)

Query: 5   KAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAF 64
           K  +PG + + +NK+A+  + +    EAG+ L G EVKSLR  K N++D++  +++GE F
Sbjct: 4   KKEEPGHSPL-VNKKAKFNFELVSFIEAGIVLSGSEVKSLREKKGNLTDAFAKIKNGEVF 62

Query: 65  LFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAW-C 123
           L   +ITP      +V     R RKLLL+++E++ L  +V  +G  +VA  +Y+KN    
Sbjct: 63  LENFSITPYKNGG-YVNHPEIRPRKLLLHKKEIEKLERQVKEKGLVLVATKVYFKNNLRV 121

Query: 124 KVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           KV+I V K KK HDKR D+++++ Q + AR +K+++R
Sbjct: 122 KVEIAVGKPKKIHDKRDDMQKKDAQQEIARALKSSNR 158


>UniRef50_A3ZLQ9 SsrA-binding protein n=2 Tax=Planctomycetaceae RepID=A3ZLQ9_9PLAN
          Length = 176

 Score =  104 bits (260), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 85/145 (58%)

Query: 13  TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
            I  N++ARH+Y I +  E G+ L G EVK+LR GK ++ +++  +  GE FL    I  
Sbjct: 30  PIGENRKARHDYEIIDTLECGIQLVGSEVKTLRDGKVSLGEAFARVLRGEVFLVNCEIPE 89

Query: 73  MAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKG 132
               S  +   P R RKLLL + E+     +   +G ++V L +Y+K    KV +G+ +G
Sbjct: 90  YRNTSMFLNHVPKRPRKLLLRKSEIVKFAAKSEDKGLSIVPLKMYFKRGLVKVLLGIGRG 149

Query: 133 KKQHDKRSDIKEREWQVDKARIMKN 157
           +KQHDKR  +K+++ + D AR+M++
Sbjct: 150 RKQHDKRDKLKQQDAKRDIARVMRS 174


>UniRef50_B1VAG4 SsrA-binding protein n=2 Tax=Candidatus Phytoplasma
           RepID=B1VAG4_PHYAS
          Length = 176

 Score =  102 bits (255), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 93/141 (65%), Gaps = 6/141 (4%)

Query: 13  TIALNKRARHEYFIEEE-FEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
           TIA NK+A  ++F+E++ + AG+ L G EVKS+R GK ++++SY  +++ E F+   +I 
Sbjct: 29  TIATNKKAVFDFFLEKKKYHAGIKLLGNEVKSIRLGKISLNNSYAYIKNNEIFIVNLSIL 88

Query: 72  --PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGV 129
             P +    +   D  RT+KLLL ++E+  +  ++  +G++V+ L +Y++    KV+I +
Sbjct: 89  KYPFSCCMQY---DENRTKKLLLRKQEIIQIQNKIKTQGFSVIPLKVYFEKNLVKVEIVL 145

Query: 130 AKGKKQHDKRSDIKEREWQVD 150
           AKGKK++DKR+ +KE+  Q+ 
Sbjct: 146 AKGKKKYDKRNSLKEKAAQLS 166


>UniRef50_B2GAM5 SsrA-binding protein n=4 Tax=Bacteria RepID=SSRP_LACF3
          Length = 157

 Score =  102 bits (254), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/157 (40%), Positives = 95/157 (60%), Gaps = 1/157 (0%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M KK      +  IA NK+ARH+Y + + FEAGL L G E+KS+RA +  + D Y    +
Sbjct: 1   MAKKNHQGLDANLIAQNKKARHDYTVTDTFEAGLVLTGTEIKSVRARRVTLKDGYAQFHN 60

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GE +L   +I   A  +     DP R RKLLL+++EL  L G +  +G T+V L +Y K+
Sbjct: 61  GELWLMNVHIAEFAGGNI-FNHDPLRNRKLLLHKKELKKLQGELTAKGVTLVPLKMYLKH 119

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKN 157
            + KV +G+A+GK ++DKR+ IK+RE      R+MK+
Sbjct: 120 GYAKVLLGLAQGKHEYDKRNAIKKREQDRQIDRVMKH 156


>UniRef50_Q9Z8K1 SsrA-binding protein n=2 Tax=Chlamydophila pneumoniae
           RepID=SSRP_CHLPN
          Length = 151

 Score =  102 bits (253), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 86/146 (58%), Gaps = 1/146 (0%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           I  N++A   Y + E  EAG+ L G E+KSLR    N+ D+YV++  GE +L  A+I P 
Sbjct: 6   IVSNRKALRNYEVIETLEAGIVLTGTEIKSLRDHGGNLGDAYVIVSKGEGWLLNASIAPY 65

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGK 133
              + +   +  R RKLLL++ EL  L G++ ++G T++ L ++    + KV++G  +GK
Sbjct: 66  RFGNIYN-HEERRKRKLLLHRYELRKLEGKIAQKGMTLIPLGMFLSRGYVKVRLGCCRGK 124

Query: 134 KQHDKRSDIKEREWQVDKARIMKNAH 159
           K +DKR  I ERE + + A  MK  H
Sbjct: 125 KAYDKRRTIIEREKEREVAAAMKRRH 150


>UniRef50_C9RKN3 SsrA-binding protein n=1 Tax=Fibrobacter succinogenes subsp.
           succinogenes S85 RepID=C9RKN3_FIBSS
          Length = 156

 Score =  100 bits (248), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 92/157 (58%), Gaps = 8/157 (5%)

Query: 8   KPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDG--EAFL 65
           K  S  +  N++A H YF++E FE G+ L G EVKS+R GK  + ++++ + +   E +L
Sbjct: 4   KESSTPVIQNRKANHLYFVDETFEVGIMLIGSEVKSIRNGKCTLGEAWIDIDENKDELWL 63

Query: 66  FGANITPMAVAS--THVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWC 123
            GA+I     A+   H    P R RKLL +  E+  +      +G T++ L +Y+KN   
Sbjct: 64  VGAHIDEYLFANRFNHF---PARRRKLLAHTHEIQKMRKAKELKGCTIIPLKMYFKNRIA 120

Query: 124 KVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           K+++G+ +GK QHDKR DI  R+ +++ AR  K AHR
Sbjct: 121 KLEVGICRGKDQHDKRQDILVRDAKMEMARAAK-AHR 156


>UniRef50_Q6YR70 SsrA-binding protein n=3 Tax=Candidatus Phytoplasma asteris
           RepID=SSRP_ONYPE
          Length = 152

 Score =  100 bits (248), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 94/149 (63%), Gaps = 2/149 (1%)

Query: 13  TIALNKRARHEYFIEEE-FEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
           TI  NK+A ++Y +E++ ++AG+ L G EVKS+R GK N+ +SY+ +++ EAF+    I 
Sbjct: 3   TIITNKKAFYDYSLEKKKYQAGIKLLGSEVKSIRIGKINLLNSYIHIKNEEAFIVNMTIL 62

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
                S  +  D  RT+KLLL + E+  +  ++  E  +V+ L +Y+     K++I ++K
Sbjct: 63  KYPF-SCCLAYDENRTKKLLLQKHEIIQIKNKIKTEKLSVIPLKVYFNKNLVKLEIALSK 121

Query: 132 GKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           GKKQHDKR+ +K+ + ++   + +KN ++
Sbjct: 122 GKKQHDKRNALKDFDAKLRIQKTLKNFNQ 150


>UniRef50_B2S2D1 SsrA-binding protein n=2 Tax=Treponema pallidum RepID=SSRP_TREPS
          Length = 154

 Score = 98.6 bits (244), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 56/150 (37%), Positives = 86/150 (57%), Gaps = 1/150 (0%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
           G+  IA N++A   Y +E+  E G+AL+G EVKS+RAG  +  D++  +R GE +L   +
Sbjct: 5   GTHLIAKNRKAFFNYHVEDRLECGIALEGTEVKSVRAGHLSFPDAFAEMRGGELWLKNVH 64

Query: 70  ITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGV 129
           I     A +    +P R RKLL ++ ++  L  +V  +GYT+V L  Y K    KV +G+
Sbjct: 65  IAEYVHACS-FAPNPDRMRKLLAHRDQIARLKRKVEEKGYTLVPLEFYLKAGRVKVALGI 123

Query: 130 AKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
            KGKK  DKR+ IK R+   + +R +   H
Sbjct: 124 CKGKKLFDKRAQIKARDNARELSRSLCERH 153


>UniRef50_D2PSC9 SsrA-binding protein n=1 Tax=Kribbella flavida DSM 17836
           RepID=D2PSC9_9ACTO
          Length = 173

 Score = 97.4 bits (241), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/134 (40%), Positives = 84/134 (62%), Gaps = 1/134 (0%)

Query: 13  TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
            IA N++A H+Y + E +EAG+ LQG EVK+LRAG+A++   +  + + E +L G +I P
Sbjct: 23  VIARNRKAAHDYHLGESWEAGMVLQGAEVKALRAGRASLVGGFATVEEREIWLHGVHI-P 81

Query: 73  MAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKG 132
               +        R RKLLL++ ++D +  +VN  G T+V + LY+K+   KV+I +A+G
Sbjct: 82  QYSQARWFNDGSRRKRKLLLHRAQIDKIERKVNESGLTIVPVLLYFKDGRAKVEIALARG 141

Query: 133 KKQHDKRSDIKERE 146
           KK  DKR  + ERE
Sbjct: 142 KKTWDKRHALAERE 155


>UniRef50_C9LGK2 SsrA-binding protein n=8 Tax=Prevotella RepID=C9LGK2_9BACT
          Length = 159

 Score = 97.1 bits (240), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 92/161 (57%), Gaps = 4/161 (2%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M K    KP    I  NKRA H+YF+ +   AG+ L G E+KS+R GKA + D++  + +
Sbjct: 1   MAKNNKLKPARINIK-NKRAEHDYFVIDRLTAGIVLTGTEIKSIRLGKAGLVDTFCFINN 59

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-K 119
           GE ++    +   +  S +   +  R RKLLLN++E+          G T+V L LY  +
Sbjct: 60  GEMWVKNMYVAEYSFGSYN-RHELRRDRKLLLNKKEIRHWASETKSPGLTIVPLRLYIDE 118

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           N   K+ IG+ +GKK++DKR+ IKE+E + +  R+ K AH+
Sbjct: 119 NGRAKLDIGLCRGKKEYDKRATIKEKESRREIERVTK-AHK 158


>UniRef50_Q3ARF1 SsrA-binding protein n=11 Tax=Chlorobiaceae RepID=SSRP_CHLCH
          Length = 157

 Score = 97.1 bits (240), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 97/156 (62%), Gaps = 6/156 (3%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M+K+   +   A +  N++ARHE+ I E F AG+ L G EVKS+R G+A++++S+ ++  
Sbjct: 1   MSKQPQQRYAEAIV--NRKARHEFEIIETFVAGIQLAGSEVKSVRLGQASLNESFAIILR 58

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVAL-SLYWK 119
            E +L    ITP       V+ +  R+RKLLL+++E+  L  +V+ +G T+V L + +  
Sbjct: 59  NEVWLENMQITPYKHNRMEVL-EAKRSRKLLLHKKEIAKLQAKVSEKGLTLVPLKAFFTP 117

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQ--VDKAR 153
           +   K+++ +A+GKK +DKR  +K RE Q  +D+ R
Sbjct: 118 HGLLKIELAIARGKKLYDKRETLKNRENQRHLDQLR 153


>UniRef50_A6DIW5 SsrA-binding protein n=2 Tax=Bacteria RepID=A6DIW5_9BACT
          Length = 147

 Score = 96.7 bits (239), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 52/133 (39%), Positives = 85/133 (63%), Gaps = 1/133 (0%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           IA N++AR  Y I E++EAG+ LQG EVKS R    +I++++V    GEA++  ++I+P 
Sbjct: 3   IATNRKARFNYEIIEKYEAGVELQGTEVKSCRNKSISIAEAFVAFESGEAWMRESHISPY 62

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGK 133
              + +   +P R R+LLL++RE+  L   V ++G +V+ LS++ K    K+ IG+ +GK
Sbjct: 63  EQGNRNN-HEPKRKRRLLLHKREIRKLMREVEQKGLSVIPLSVHLKRGKIKISIGLCRGK 121

Query: 134 KQHDKRSDIKERE 146
              DKR  IK+R+
Sbjct: 122 NTVDKRDSIKKRD 134


>UniRef50_Q254F5 SsrA-binding protein n=1 Tax=Chlamydophila felis Fe/C-56
           RepID=SSRP_CHLFF
          Length = 150

 Score = 96.7 bits (239), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 52/146 (35%), Positives = 84/146 (57%), Gaps = 1/146 (0%)

Query: 11  SATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI 70
           S  I  N++A   Y + +  +AG+ L G E+KSLR    N+ D+YV +  GEA+L  A+I
Sbjct: 3   SKEIVSNRKALRNYEVLDTVDAGVVLTGTEIKSLRDHGGNLGDAYVTISKGEAWLLNASI 62

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVA 130
            P    + +   +  R RKLLL++ E+  L  +V+++G T++ L ++    + K+++G  
Sbjct: 63  APYRFGNIYN-HEERRKRKLLLHRYEIQKLESKVSQKGITIIPLGMFLSRGYVKIRLGCC 121

Query: 131 KGKKQHDKRSDIKEREWQVDKARIMK 156
           +GKK HDKR  I  RE Q +    MK
Sbjct: 122 RGKKAHDKRQTIIAREKQREVESAMK 147


>UniRef50_Q0SPD1 SsrA-binding protein n=20 Tax=Borrelia RepID=SSRP_BORAP
          Length = 150

 Score = 95.9 bits (237), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 88/142 (61%), Gaps = 5/142 (3%)

Query: 17  NKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVA 76
           NK+A+  YFIEE+   G+ L+G EVKS++A K + ++S+ +++  E +L   +++     
Sbjct: 10  NKKAKFNYFIEEKISCGIVLKGTEVKSIKAKKLSFNNSFAIIKKEELWLENLHVSKYKEG 69

Query: 77  S--THVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGKK 134
           +   H   D  R RKLL+ ++EL  L     +EGYT++ +S Y K +  KV++G+ KGKK
Sbjct: 70  NIFNH---DELRPRKLLIKKKELQRLKKFKEKEGYTLIPISFYLKKSIIKVEVGICKGKK 126

Query: 135 QHDKRSDIKEREWQVDKARIMK 156
            +DKR  +K++  + D +R +K
Sbjct: 127 LYDKREILKQKSIKKDLSREIK 148


>UniRef50_D2R3D1 SsrA-binding protein n=1 Tax=Pirellula staleyi DSM 6068
           RepID=D2R3D1_9PLAN
          Length = 179

 Score = 95.1 bits (235), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 89/151 (58%), Gaps = 6/151 (3%)

Query: 9   PGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGA 68
           P    +A N++AR  Y I +  E G+ L G EVKSLR GK ++ ++Y  ++DG+ +L GA
Sbjct: 29  PPVTLVAENRKARFNYEILDSLECGIQLVGSEVKSLRDGKLSLDEAYARIKDGDVWLVGA 88

Query: 69  NITPMAVAS--THVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-KNAWCKV 125
           +I     AS   H    P R RKLL++++++    G  + +G T+V L +Y+ +    KV
Sbjct: 89  DIAEYKQASIWNHA---PKRPRKLLMHKQQMRKFAGTSHDKGLTLVPLKVYFTERGIAKV 145

Query: 126 KIGVAKGKKQHDKRSDIKEREWQVDKARIMK 156
            IG+ +GKK HDKR  +K+ + + D +R  +
Sbjct: 146 VIGLCRGKKLHDKRETLKKNDAKRDISRAFR 176


>UniRef50_Q7UH38 SsrA-binding protein n=1 Tax=Rhodopirellula baltica
           RepID=SSRP_RHOBA
          Length = 176

 Score = 95.1 bits (235), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 55/153 (35%), Positives = 87/153 (56%), Gaps = 6/153 (3%)

Query: 7   HKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLF 66
           ++P    +A N++A+  Y I +  E G+ L G EVKS+R GK ++ ++++ + +GE +L 
Sbjct: 25  NQPNITPVAENRKAKFRYEILDSVECGMMLMGSEVKSMREGKLSLDEAHIRVTNGELWLV 84

Query: 67  GANITPMAVAS--THVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-KNAWC 123
           G++I     A    H   DP R RKLL++ +E D   GR    G T++ L +Y+ +    
Sbjct: 85  GSDIAHYNNAGMWNH---DPRRPRKLLVHAKEFDKFAGRAFERGLTLIPLRVYFSERGLA 141

Query: 124 KVKIGVAKGKKQHDKRSDIKEREWQVDKARIMK 156
           K  +G+ KGKK HDKR  IK+RE      R M+
Sbjct: 142 KCVMGLVKGKKLHDKRETIKKRESDRGLQRAMR 174


>UniRef50_D1VZH7 SsrA-binding protein n=1 Tax=Prevotella timonensis CRIS 5C-B1
           RepID=D1VZH7_9BACT
          Length = 160

 Score = 93.6 bits (231), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 86/144 (59%), Gaps = 6/144 (4%)

Query: 17  NKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVA 76
           NKRA  EYF  + + AG+ L G E+KS+R GKA++ D++  + +GE ++ G NI+P    
Sbjct: 19  NKRASFEYFFIDTYTAGIVLTGTEIKSIRLGKASLVDAFCYINNGEIWVKGMNISPYFYG 78

Query: 77  --STHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-KNAWCKVKIGVAKGK 133
             S H   +  R RKLLL +RE+  L       G T++ + L+  +    KV I +AKGK
Sbjct: 79  SFSNH---EARRDRKLLLTKREIRRLEIDAKNPGNTILPVLLFIDQKGRAKVDIVLAKGK 135

Query: 134 KQHDKRSDIKEREWQVDKARIMKN 157
           K++DKR  +KE+E Q +  R +K+
Sbjct: 136 KEYDKRQSLKEKEDQREMDRALKH 159


>UniRef50_Q11TP3 SsrA-binding protein n=36 Tax=Bacteroidetes RepID=SSRP_CYTH3
          Length = 153

 Score = 93.6 bits (231), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 85/139 (61%), Gaps = 2/139 (1%)

Query: 17  NKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVA 76
           NK+A  EY   E++EAG+ L+G E+K++R  KA+IS++Y L  + E ++   NI+     
Sbjct: 14  NKKASFEYEFLEKYEAGIVLKGTEIKAIRMSKASISEAYCLFDNEELWIKNMNISSYDKG 73

Query: 77  STHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-KNAWCKVKIGVAKGKKQ 135
           S +   DP   RKLLL + EL  L+     +G T++AL L+  +  + K++I +AKGKK 
Sbjct: 74  SFY-NHDPLSARKLLLRKAELKKLFMHSKEKGLTIIALRLFTNERGYAKIEIALAKGKKL 132

Query: 136 HDKRSDIKEREWQVDKARI 154
           +DKR  IK ++ + +  RI
Sbjct: 133 YDKRESIKSKDNEREMQRI 151


>UniRef50_B1AI43 SsrA-binding protein n=16 Tax=Mycoplasmataceae RepID=SSRP_UREP2
          Length = 141

 Score = 93.2 bits (230), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 49/133 (36%), Positives = 77/133 (57%), Gaps = 1/133 (0%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           I  NK AR  Y + + FE G+ L+G EVKS+     +I+++YV +   +A +   ++   
Sbjct: 2   IVSNKHARRNYELLDFFECGIVLKGTEVKSISRANCSINEAYVQIIKNQALILNMHVANF 61

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGK 133
                +   DP R RKLLL+++E+  L   V  +  T+V   +YWKN   K++I + KGK
Sbjct: 62  -FEGNNFNQDPYRNRKLLLHKKEIIRLQHLVKTQHMTIVPTKIYWKNNKLKIEIALGKGK 120

Query: 134 KQHDKRSDIKERE 146
           + HDKR DIK+R+
Sbjct: 121 QLHDKREDIKKRD 133


>UniRef50_A9G6R4 SmpB-like protein n=1 Tax=Sorangium cellulosum 'So ce 56'
           RepID=A9G6R4_SORC5
          Length = 139

 Score = 92.8 bits (229), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/114 (45%), Positives = 73/114 (64%), Gaps = 4/114 (3%)

Query: 34  LALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVAS-THVVCDPTRTRKLLL 92
           + L G EVK LR G A ++DS+  + +GEAFL G NI  M  A+  H   +  R RKLLL
Sbjct: 1   MVLLGSEVKMLRDGAAELTDSWCAIENGEAFLKGVNIPVMPGAAFGH---EAKRPRKLLL 57

Query: 93  NQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDIKERE 146
           ++ E++++   V REG TV+A  LY+KN   K +I +AKGKK  DKR  +KE++
Sbjct: 58  HESEIEAIRKSVEREGMTVIATRLYFKNGRVKAEIALAKGKKTVDKRESLKEKD 111


>UniRef50_A0M3P0 SsrA-binding protein n=13 Tax=Bacteroidetes RepID=SSRP_GRAFK
          Length = 157

 Score = 92.4 bits (228), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 83/141 (58%), Gaps = 2/141 (1%)

Query: 17  NKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVA 76
           N++A+  Y   +++ AG+ L G E+K++R GKANI++S+    + E F+   ++   + A
Sbjct: 15  NRKAKFNYEFLDKYTAGIKLAGTEIKAIREGKANIAESFCEFNNHELFVINMHVEEYSHA 74

Query: 77  STHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN-AWCKVKIGVAKGKKQ 135
            TH   +P   RKLLL +REL  L   V   G T++ L L+  +    K++I +AKGKK 
Sbjct: 75  -THFNHNPRSQRKLLLQRRELRKLEKEVTNSGLTIIPLRLFINDRGLAKLQISLAKGKKL 133

Query: 136 HDKRSDIKEREWQVDKARIMK 156
           +DKR  IK+RE +    RI K
Sbjct: 134 YDKRETIKDRESKRRLDRIQK 154


>UniRef50_C6HYH8 SsrA-binding protein n=1 Tax=Leptospirillum ferrodiazotrophum
           RepID=C6HYH8_9BACT
          Length = 170

 Score = 92.0 bits (227), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 85/148 (57%), Gaps = 2/148 (1%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           ++ N++A   Y + E FEAG+ L G EVK++R G  N+ D++V     E++L+  ++ P 
Sbjct: 18  VSTNRKALFRYEVIERFEAGIVLWGTEVKAIREGSVNLGDAFVRFEKEESWLYQMHVGPY 77

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN-AWCKVKIGVAKG 132
                    DP R RKLLL+++E+  L+G   ++G TVV L +Y  N    KV + + KG
Sbjct: 78  R-GGNRENHDPLRVRKLLLHRKEILRLFGLTLQKGLTVVPLGIYSNNRKKFKVTLALVKG 136

Query: 133 KKQHDKRSDIKEREWQVDKARIMKNAHR 160
           K Q DKR  IK RE   + +R+ ++  +
Sbjct: 137 KTQGDKREAIKRREADREISRVFRSNQK 164


>UniRef50_C2D8P0 TmRNA-binding protein n=2 Tax=Coriobacteriaceae RepID=C2D8P0_9ACTN
          Length = 172

 Score = 91.7 bits (226), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 88/144 (61%), Gaps = 2/144 (1%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           IA N+ A H+Y ++   EAG+ L G EVKSLR     ++D + ++R+ E +L G +I P 
Sbjct: 22  IAKNRSAYHDYDLDNAEEAGIELTGVEVKSLRERSCQLTDCFCIVRNNELYLVGLHIHPY 81

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-KNAWCKVKIGVAKG 132
           +      + DP R R+LL++++++ S+  RV  +G ++V L +Y+ +    KVK+ V +G
Sbjct: 82  SHGGVWNI-DPDRRRRLLMHKKQILSIARRVQTKGVSLVPLEIYFNERNRVKVKVAVGRG 140

Query: 133 KKQHDKRSDIKEREWQVDKARIMK 156
           KK +DKR+   +R+   +  R++K
Sbjct: 141 KKMYDKRAAAAKRDSDREIQRVLK 164


>UniRef50_C6SHY7 SsrA-binding protein n=1 Tax=Neisseria meningitidis alpha275
           RepID=C6SHY7_NEIME
          Length = 146

 Score = 91.7 bits (226), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 1/96 (1%)

Query: 64  FLFGANITPM-AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAW 122
           F++ A I  +   ASTH+  D  R RKLLLNQ E++ L G+  R GYT+V L L++    
Sbjct: 50  FIWSAAILRLCPTASTHIKPDAVRPRKLLLNQSEINKLIGKTERAGYTIVPLDLHFSRGK 109

Query: 123 CKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
            K++IG+AKGKKQHDKR  +KE +W+ +K R++K+ 
Sbjct: 110 IKMEIGLAKGKKQHDKRQSMKEADWKREKQRLIKHT 145


>UniRef50_Q7NB37 SsrA-binding protein n=1 Tax=Mycoplasma gallisepticum
           RepID=SSRP_MYCGA
          Length = 144

 Score = 91.3 bits (225), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/130 (38%), Positives = 78/130 (60%), Gaps = 1/130 (0%)

Query: 17  NKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVA 76
           NK+A++ Y + +++EAG++L G EVKSL      + DSYV++R  EA+L    + P    
Sbjct: 8   NKKAKYNYELLDKYEAGISLSGNEVKSLALHHGKLDDSYVIIRKNEAYLLNL-LIPKYKF 66

Query: 77  STHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGKKQH 136
            T  V + TRTRKLLL++ E+  +     +    ++   +Y+ N   KV I +A+ KK++
Sbjct: 67  DTSKVLNETRTRKLLLHKSEILKIDLIKKQHSLVIIPYQIYFVNNKIKVSIYLARPKKRY 126

Query: 137 DKRSDIKERE 146
           DKR  IKERE
Sbjct: 127 DKRQTIKERE 136


>UniRef50_Q02A69 SsrA-binding protein n=1 Tax=Candidatus Solibacter usitatus
           Ellin6076 RepID=SSRP_SOLUE
          Length = 156

 Score = 90.9 bits (224), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 80/139 (57%), Gaps = 6/139 (4%)

Query: 17  NKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVA 76
           N++A H YF+ E FE G+ L G EVK+ +  K  + D+Y  +   EA+L  A+I+  +  
Sbjct: 15  NRQAGHNYFLSERFECGMVLTGTEVKAAKDAKIQLKDAYASVLGDEAWLLNAHISQYSHG 74

Query: 77  S--THVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGKK 134
           +   H+   P R RKLLL++RE+D L      +G  ++   +Y KN   K +I VAKGKK
Sbjct: 75  NRENHL---PVRNRKLLLHRREIDKLQEITREKGLALIPTKIYMKNGKIKCEIAVAKGKK 131

Query: 135 QHDKRSDIKEREWQVDKAR 153
            +DKR+  K R    D+AR
Sbjct: 132 LYDKRAADKARTAD-DEAR 149


>UniRef50_Q6KI26 SsrA-binding protein n=1 Tax=Mycoplasma mobile RepID=SSRP_MYCMO
          Length = 142

 Score = 90.9 bits (224), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 82/134 (61%), Gaps = 6/134 (4%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP- 72
           I  NK A   Y I E+++AGL L+GWEVKS+R  K  +  +++  ++ EA++   +I+  
Sbjct: 4   IIKNKDAFFNYEILEKYKAGLILKGWEVKSIRENKVQLKGAFITFKNDEAYITNMHISQY 63

Query: 73  MAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKG 132
           M+V    +  +P   RKLLLN+ E+  +  + NR    V+ L+L+W N + K++I +AKG
Sbjct: 64  MSVKGNEL--EP---RKLLLNKHEIRHIQDKKNRNSLAVIPLNLFWDNNYIKLEIALAKG 118

Query: 133 KKQHDKRSDIKERE 146
           K + DKR  I E++
Sbjct: 119 KTKADKRHRILEKD 132


>UniRef50_B1GZD8 SsrA-binding protein SmpB n=1 Tax=uncultured Termite group 1
           bacterium phylotype Rs-D17 RepID=B1GZD8_UNCTG
          Length = 153

 Score = 89.7 bits (221), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 84/143 (58%), Gaps = 2/143 (1%)

Query: 13  TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
           T++ N++A + Y I E+ E G+ L G+EVKS R    ++ DS V   D EAF     I  
Sbjct: 9   TLSSNRKAYYNYEILEKLETGIVLSGYEVKSARQSNISLVDSVVRFSDCEAFAENMFIAS 68

Query: 73  MAVASTHVV-CDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN-AWCKVKIGVA 130
               STH+   D  R RKLL+++ E++ +  +V  +G TV+ L +Y  N    K+ IG+A
Sbjct: 69  YEQISTHIADYDAKRKRKLLMHKSEINKMRTKVKEKGLTVIPLEVYIGNRGKIKLLIGLA 128

Query: 131 KGKKQHDKRSDIKEREWQVDKAR 153
           KGKK ++K+  +K+++ + + AR
Sbjct: 129 KGKKTYNKKEALKKKDIEREVAR 151


>UniRef50_Q83N13 SsrA-binding protein n=2 Tax=Tropheryma whipplei RepID=SSRP_TROWT
          Length = 211

 Score = 88.6 bits (218), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 85/148 (57%), Gaps = 1/148 (0%)

Query: 13  TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
            IA NK A + YF+++ FEAGL L G EVKS+R  K ++S++Y+   + E +L    I P
Sbjct: 26  VIASNKSAEYNYFLDKTFEAGLVLLGSEVKSVRQQKISLSEAYIYEDNSEIWLANLYI-P 84

Query: 73  MAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKG 132
                     +P R RKLLL++ ++  L   +   G T+V +  Y++N   K+ I +A+G
Sbjct: 85  EHKTGGWTNHNPRRLRKLLLHKYQIARLRKDLLIPGITLVPIKFYFRNGRAKLLIALARG 144

Query: 133 KKQHDKRSDIKEREWQVDKARIMKNAHR 160
           KK  DKR  IKERE  ++  R +K+  R
Sbjct: 145 KKLIDKREVIKEREATLEANRALKHRLR 172


>UniRef50_C6X237 TmRNA-binding protein SmpB n=2 Tax=Flavobacteriales
           RepID=C6X237_FLAB3
          Length = 155

 Score = 88.6 bits (218), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 63/159 (39%), Positives = 89/159 (55%), Gaps = 5/159 (3%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M K K  K  S TI LN+RAR EY + EE EAG+ L G E+KSLR+ KA+I+D++    D
Sbjct: 1   MFKMKIEK--SVTI-LNRRARFEYELLEEIEAGMVLTGTEIKSLRSSKASITDAFCQFID 57

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK- 119
           GE ++    I    +  T       R RKLLL++ EL     ++   G T++ L +Y   
Sbjct: 58  GELYIINMMIDEYKLG-TFYNHKTKRERKLLLHKTELKKFEKKLKDVGNTIIPLKMYINA 116

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
               K+ I V +GKK  DKR  IK+RE + +  RI+K +
Sbjct: 117 KGKAKILIAVGRGKKLFDKRESIKDRENKRNIDRILKKS 155


>UniRef50_P75043 SsrA-binding protein n=2 Tax=Mycoplasma RepID=SSRP_MYCPN
          Length = 147

 Score = 86.7 bits (213), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 80/132 (60%), Gaps = 1/132 (0%)

Query: 17  NKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVA 76
           N RA+++Y++   + AGL L+G EVKSL  G+ ++ ++YV +   E ++   +I+P A  
Sbjct: 7   NPRAQYDYYLLTGYCAGLVLKGSEVKSLALGQGSLKEAYVFIDKHEVYIKDFSISPYAF- 65

Query: 77  STHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGKKQH 136
           S        R +KLLLN+ E+  +  R  +EG +++ L +++KN   K++I +AK KK+ 
Sbjct: 66  SGEFNHPFKRVKKLLLNRNEIKQITARQKQEGLSIIPLKVFFKNGKIKMEIWLAKPKKKF 125

Query: 137 DKRSDIKEREWQ 148
           DKR  IK +  Q
Sbjct: 126 DKREAIKSKTIQ 137


>UniRef50_B7GAQ2 Predicted protein (Fragment) n=3 Tax=Bacillariophyta
           RepID=B7GAQ2_PHATR
          Length = 160

 Score = 86.7 bits (213), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 90/157 (57%), Gaps = 3/157 (1%)

Query: 4   KKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVL-LRDGE 62
           KK +K   +TI++N+ A   Y I +  EAG++L G EVKS+R GK N+ D Y+   +DG 
Sbjct: 1   KKKNKTRDSTISVNRVAYRNYEIVDTIEAGISLVGTEVKSIRNGKLNLRDGYIRPTKDGR 60

Query: 63  A-FLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNA 121
           +  L+  +I   + A      + TR R LL+++ E      +  ++G T+V L  Y+ + 
Sbjct: 61  SCILYNVHIGKHSQAGAFFQHEETRPRALLVHKAEARKFLQQTEQQGMTIVPLKAYYNDK 120

Query: 122 -WCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKN 157
              K++I + +GK   DKR  IKER+ + ++ RI+K+
Sbjct: 121 NRVKLQIALCRGKNVRDKRVTIKERDAKREERRIIKS 157


>UniRef50_A6L927 SsrA-binding protein n=17 Tax=Bacteria RepID=SSRP_PARD8
          Length = 153

 Score = 85.1 bits (209), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 78/131 (59%), Gaps = 2/131 (1%)

Query: 17  NKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVA 76
           NKRA  +Y + + F AG+ L G E+KS+R GKA++ D++ ++  GE ++    I      
Sbjct: 13  NKRATFDYELLDTFTAGIVLTGTEIKSIRLGKASLVDTFCIVEKGELWVKNMYIAEY-FY 71

Query: 77  STHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-KNAWCKVKIGVAKGKKQ 135
            T+   +  R RKLLL ++EL  + G V   G+T+V   L+  +    KV + +A+GKK+
Sbjct: 72  GTYNNHNARRDRKLLLTKKELRKIEGAVRASGFTIVPTRLFINEKGLAKVVVAIARGKKE 131

Query: 136 HDKRSDIKERE 146
           +DKR  I+ER+
Sbjct: 132 YDKRDSIRERD 142


>UniRef50_D1NAK5 SsrA-binding protein n=1 Tax=Victivallis vadensis ATCC BAA-548
           RepID=D1NAK5_9BACT
          Length = 153

 Score = 84.7 bits (208), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 80/150 (53%), Gaps = 5/150 (3%)

Query: 9   PGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGA 68
           P    +A NK+A H Y I E FEAG+ L G EVKS R     +++ YV + +G+A+L   
Sbjct: 6   PADPVLATNKKAFHNYHIIERFEAGVELVGTEVKSCRDRAIVMNEGYVTINNGQAWLLNV 65

Query: 69  NITPMAVAS--THVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVK 126
           +I      +   HV    T+ R+LLL+  E+  L   + ++G T+V L  Y K    KV+
Sbjct: 66  HIAVYGFGNRFNHVA---TQKRRLLLHHNEILKLAQWLGQKGGTIVPLKFYLKKGLVKVE 122

Query: 127 IGVAKGKKQHDKRSDIKEREWQVDKARIMK 156
           I   +GK   D+R  ++ R+  ++  R +K
Sbjct: 123 IAYCQGKTHGDQRETLRRRQSDLEMRRAVK 152


>UniRef50_A5IZI0 SsrA-binding protein n=3 Tax=Mycoplasma RepID=SSRP_MYCAP
          Length = 147

 Score = 83.2 bits (204), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 80/136 (58%), Gaps = 6/136 (4%)

Query: 13  TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
            I+ N++  + Y I E+ EAG++L GWEVKS RA   N+++SY+  + GE FL  AN   
Sbjct: 3   VISENRKGLYGYKIIEKHEAGISLLGWEVKSARAQTVNLTNSYIFFKKGELFLCNANFAK 62

Query: 73  MAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVV-ALSLYWKN-AWCKVKIGVA 130
             +       +  R RKLL++++E+  L  +++R   T +    +Y+ N +  KV+I + 
Sbjct: 63  YMLLK----VEEDRDRKLLMHKKEIIRLKNKLDRLSSTTIKPTKIYFNNKSKIKVEIALV 118

Query: 131 KGKKQHDKRSDIKERE 146
           +G  + DKR D+K+R+
Sbjct: 119 QGMNRADKREDLKKRD 134


>UniRef50_UPI0001912596 SsrA-binding protein n=1 Tax=Salmonella enterica subsp. enterica
          serovar Typhi str. E98-3139 RepID=UPI0001912596
          Length = 98

 Score = 82.0 bits (201), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 38/40 (95%), Positives = 40/40 (100%)

Query: 3  KKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVK 42
          ++KAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVK
Sbjct: 6  EEKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVK 45


>UniRef50_B3PM30 SsrA-binding protein n=2 Tax=Mycoplasma RepID=B3PM30_MYCA5
          Length = 143

 Score = 82.0 bits (201), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 72/136 (52%), Gaps = 5/136 (3%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLL-RDGEAFLFGANI 70
           A I  NK  + EY I   +E G++L GWE KSLRA  A +  S+  + +  E +L  A I
Sbjct: 2   ALIVKNKFPKLEYEIHSTYECGISLLGWEAKSLRAKNAKLESSFCSISQSDELWLNNAYI 61

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVA 130
               +    V  DP R+RKLL+++ E+  L     R     + LS YW+    KV+I +A
Sbjct: 62  AQYML----VKGDPLRSRKLLMHRHEIKKLRSLQQRLNLIFIPLSFYWRGNKIKVEIALA 117

Query: 131 KGKKQHDKRSDIKERE 146
           K   +HDKR  IK+ E
Sbjct: 118 KHLNKHDKREKIKKDE 133


>UniRef50_B3EUI8 SsrA-binding protein n=4 Tax=Bacteroidetes RepID=B3EUI8_AMOA5
          Length = 156

 Score = 81.6 bits (200), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 83/146 (56%), Gaps = 7/146 (4%)

Query: 11  SATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI 70
           +  +  NK+A  EY   ++F AG+ L G E+KS+R  K ++ ++Y   + GE ++   +I
Sbjct: 9   TGLVIRNKQASFEYTFIDKFIAGIVLTGTEIKSIRKAKVSLQEAYCYFKSGELWIKSMHI 68

Query: 71  TPMAVAS--THVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-KNAWCKVKI 127
                 +   HV     R RKLLL ++EL+ L  +   +G T++ + L+  +N   K++I
Sbjct: 69  AQYEQGNIYNHV---ENRERKLLLTRKELNKLI-KNQEKGLTIIPIQLFIDENNRAKLQI 124

Query: 128 GVAKGKKQHDKRSDIKEREWQVDKAR 153
            +AKGKK +DKR  IKER+ Q D  R
Sbjct: 125 ALAKGKKLYDKRQHIKERDVQRDMER 150


>UniRef50_Q601U1 SsrA-binding protein n=3 Tax=Mycoplasma hyopneumoniae
           RepID=SSRP_MYCH2
          Length = 145

 Score = 78.6 bits (192), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 79/143 (55%), Gaps = 4/143 (2%)

Query: 17  NKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVA 76
           NKRA  +Y I + F AG+ L GWEVKS++A   ++  ++   +  E FL  A I+    +
Sbjct: 7   NKRANFDYEIIDRFTAGIVLLGWEVKSIQAKNISLVGAFCYFKGHELFLSNAKISEYKGS 66

Query: 77  STHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGKKQH 136
                    R+RKLL+++ EL  +          ++ L +  KN   K++I +AKGK + 
Sbjct: 67  RGQ----TDRSRKLLMHKHELKKILKEKITRKLAIIPLFIGQKNRKIKLEIALAKGKTKL 122

Query: 137 DKRSDIKEREWQVDKARIMKNAH 159
           DKR+ IKER+ + + A+ +KN +
Sbjct: 123 DKRNLIKERDQKREAAKFLKNYY 145


>UniRef50_C1D1M8 Putative SsrA-binding protein n=1 Tax=Deinococcus deserti VCD115
           RepID=C1D1M8_DEIDV
          Length = 143

 Score = 77.4 bits (189), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/126 (42%), Positives = 78/126 (61%), Gaps = 1/126 (0%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           +  N+RA +EY + E FEAG++L G EVKS+RAG  +  D++  L  G   L G  I P 
Sbjct: 4   VYTNRRAHYEYELLERFEAGISLTGSEVKSIRAGGVDFRDAFARLHGGNVDLEGLYI-PA 62

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGK 133
              +T+   +P RTR+LLLN+ E+  L   + ++G T+V   LY K  + KV++ +A+GK
Sbjct: 63  YKEATYNNHEPRRTRRLLLNRMEILKLKKGLEQKGLTLVPTRLYQKGQYFKVELALARGK 122

Query: 134 KQHDKR 139
           K HDKR
Sbjct: 123 KLHDKR 128


>UniRef50_A5KSW6 SsrA-binding protein n=2 Tax=candidate division TM7
           RepID=A5KSW6_9BACT
          Length = 154

 Score = 73.9 bits (180), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 6/156 (3%)

Query: 3   KKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGE 62
           KKK    G+    LN+RA+ +Y + +E   GL L G EV++ R G   +  +YV +R+ E
Sbjct: 2   KKKTTTSGAV---LNRRAKFDYELGDELAVGLVLNGPEVRAARDGHVQLKGAYVTIRNDE 58

Query: 63  AFLFGA--NITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
            +L  A  ++ P            T+ RKLL +++++ +L     + G T+V L L+   
Sbjct: 59  LWLNNASFSVKPAQPKRGDARAVDTQPRKLLAHRKQIATL-AEQKKTGLTIVPLKLFTSG 117

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMK 156
              K+ I   KGKK++DKR  +K R  + +  R M+
Sbjct: 118 RHIKLLIAAGKGKKKYDKRETLKRRAQEREAQRAMR 153


>UniRef50_A8Z637 SsrA (TmRNA)-binding protein n=2 Tax=Candidatus Sulcia muelleri
           RepID=A8Z637_SULMW
          Length = 146

 Score = 67.8 bits (164), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 76/142 (53%), Gaps = 9/142 (6%)

Query: 16  LNKRARHEYFIEE-----EFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI 70
           LN   R  YF  E     +F AG+ L G EVKS++    ++++SY  L     ++F   I
Sbjct: 5   LNINNRRAYFDYELINKYKFIAGIELLGSEVKSIKNNNVSLNNSYCKLIKNNIYVFDMYI 64

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-KNAWCKVKIGV 129
           +   +    +  +P R +KLLL ++E++ +Y ++N     ++  +++  +  + K+   +
Sbjct: 65  SNYLLG---INFNPKRVKKLLLKRKEINFIYNKINELKLNIIPTNIFLNERGYIKLIFFL 121

Query: 130 AKGKKQHDKRSDIKEREWQVDK 151
           AK KK +DKR  IK + ++ +K
Sbjct: 122 AKSKKNYDKRQSIKNKYFEREK 143


>UniRef50_Q4A5T2 SsrA-binding protein n=2 Tax=Mycoplasma RepID=SSRP_MYCS5
          Length = 143

 Score = 63.9 bits (154), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 69/125 (55%), Gaps = 6/125 (4%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           IA NK A+  Y I + FEAG+ L+GWEVKS RA    + ++Y  +   E FL  +     
Sbjct: 4   IATNKNAKRNYEILKTFEAGIKLEGWEVKSARASSVELKNAYCSIYKDEVFLKESYFKKY 63

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NAWCKVKIGVAKG 132
            +       + T+ RKLLL+++E+  +   + +   +++   +Y+  N+  KV++ + +G
Sbjct: 64  MLLKV----EETKNRKLLLHKKEILKIKQELQK-NLSLIPTKIYFNSNSLIKVELALGRG 118

Query: 133 KKQHD 137
            K++D
Sbjct: 119 LKKYD 123


>UniRef50_Q7P475 Small protein B n=1 Tax=Fusobacterium nucleatum subsp. vincentii
          ATCC 49256 RepID=Q7P475_FUSNV
          Length = 84

 Score = 61.6 bits (148), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 44/59 (74%)

Query: 13 TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
           IA NK+A  +YFIEE++EAG+ L+G EVKS++AGK +I +S+V + + E F+ G ++ 
Sbjct: 2  IIANNKKAFFDYFIEEKYEAGIELKGSEVKSIKAGKVSIKESFVRIINDEIFIMGMSVV 60


>UniRef50_D0N0I1 Putative uncharacterized protein n=1 Tax=Phytophthora infestans
           T30-4 RepID=D0N0I1_PHYIN
          Length = 180

 Score = 58.2 bits (139), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 62/130 (47%), Gaps = 2/130 (1%)

Query: 18  KRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVAS 77
           K A + Y +E E+  G+ LQ  EVKSLR   A++S ++      E FL   NI P+    
Sbjct: 44  KAAGNYYEVEREWNLGIVLQPSEVKSLRNRNADLSTAFGAFYKHELFLHDLNI-PVWRQG 102

Query: 78  THVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN-AWCKVKIGVAKGKKQH 136
                +PTR RKLL N+ EL  L    NR    ++ + +   N  W KV +     + Q 
Sbjct: 103 LIGRPEPTRVRKLLANRSELKKLQEFANRPNAQLIPMRIEVGNTGWIKVIMAACFKRGQI 162

Query: 137 DKRSDIKERE 146
           D R    ERE
Sbjct: 163 DNRRRDDERE 172


>UniRef50_C7LKD3 SsrA (TmRNA)-binding protein n=1 Tax=Candidatus Sulcia muelleri
           SMDSEM RepID=C7LKD3_SULMS
          Length = 150

 Score = 49.3 bits (116), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 71/127 (55%), Gaps = 5/127 (3%)

Query: 17  NKRARHEYFI--EEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMA 74
           NK+A  +Y +  +E+F AG+ L G EVK ++  K +I +SY  L +   ++F   I+   
Sbjct: 7   NKKAGFDYNLLKKEKFLAGIELLGIEVKLIKQKKVSIKNSYCKLINNNIYIFDMYISNSN 66

Query: 75  VASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN-AWCKVKIGVAKGK 133
           + +T     P R RKLLL ++E++ +  ++      ++   +   N  + K+K  +AK K
Sbjct: 67  IYNTKF--SPKRRRKLLLKKKEINQIKKQIKNLNLNIIPTEIVLNNRNFIKIKFFLAKSK 124

Query: 134 KQHDKRS 140
           K+++KR+
Sbjct: 125 KKYEKRN 131


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_B5F2A0 SsrA-binding protein n=362 Tax=Proteobacteria Re...   238   4e-62
UniRef50_Q3MAP3 SsrA-binding protein n=12 Tax=Cyanobacteria RepI...   226   2e-58
UniRef50_A5UPS2 SsrA-binding protein n=171 Tax=Bacteria RepID=SS...   224   7e-58
UniRef50_A9WJ45 SsrA-binding protein n=32 Tax=Bacteria RepID=SSR...   218   5e-56
UniRef50_A4J8T4 SsrA-binding protein n=14 Tax=Bacteria RepID=SSR...   215   4e-55
UniRef50_A1TSJ4 SsrA-binding protein n=6 Tax=Proteobacteria RepI...   214   6e-55
UniRef50_A0PYP8 SsrA-binding protein n=125 Tax=Bacteria RepID=SS...   214   6e-55
UniRef50_Q12AT7 SsrA-binding protein n=8 Tax=Burkholderiales Rep...   214   7e-55
UniRef50_B7IP12 SsrA-binding protein n=102 Tax=Bacteria RepID=SS...   214   7e-55
UniRef50_Q3JBU6 SsrA-binding protein n=47 Tax=Proteobacteria Rep...   213   1e-54
UniRef50_A0QU63 SsrA-binding protein n=25 Tax=Bacteria RepID=SSR...   212   2e-54
UniRef50_A3PWV5 SsrA-binding protein n=83 Tax=cellular organisms...   211   6e-54
UniRef50_Q2RLS9 SsrA-binding protein n=8 Tax=Clostridia RepID=SS...   211   6e-54
UniRef50_C9KNB2 SsrA-binding protein n=1 Tax=Mitsuokella multaci...   211   9e-54
UniRef50_A5G3A5 SsrA-binding protein n=5 Tax=Bacteria RepID=SSRP...   211   9e-54
UniRef50_A1WX40 SsrA-binding protein n=13 Tax=Gammaproteobacteri...   210   1e-53
UniRef50_B1MEU3 SsrA-binding protein n=68 Tax=Bacteria RepID=SSR...   209   2e-53
UniRef50_C8W8A6 SsrA-binding protein n=5 Tax=Coriobacteriaceae R...   209   2e-53
UniRef50_Q72DV1 SsrA-binding protein n=12 Tax=Bacteria RepID=SSR...   209   4e-53
UniRef50_B0TLG2 SsrA-binding protein n=12 Tax=Proteobacteria Rep...   208   5e-53
UniRef50_C7M112 SsrA-binding protein n=1 Tax=Acidimicrobium ferr...   208   6e-53
UniRef50_Q4JX42 SsrA-binding protein n=87 Tax=Bacteria RepID=SSR...   207   9e-53
UniRef50_A1WPQ3 SsrA-binding protein n=5 Tax=Proteobacteria RepI...   207   1e-52
UniRef50_Q03AJ7 SsrA-binding protein n=110 Tax=Bacteria RepID=SS...   207   1e-52
UniRef50_B8H482 SsrA-binding protein n=83 Tax=Proteobacteria Rep...   206   1e-52
UniRef50_A1KN98 SsrA-binding protein n=62 Tax=Bacteria RepID=SSR...   206   2e-52
UniRef50_A8SP47 Putative uncharacterized protein n=2 Tax=Bacteri...   206   2e-52
UniRef50_Q1H274 SsrA-binding protein n=29 Tax=Bacteria RepID=SSR...   205   3e-52
UniRef50_Q2N9K0 SsrA-binding protein n=85 Tax=cellular organisms...   205   4e-52
UniRef50_D1BK11 SsrA-binding protein n=20 Tax=Bacteria RepID=D1B...   203   1e-51
UniRef50_B2V9T6 SsrA-binding protein n=7 Tax=Bacteria RepID=SSRP...   203   1e-51
UniRef50_C8PPG5 SsrA-binding protein n=1 Tax=Treponema vincentii...   203   2e-51
UniRef50_C4Z0S0 SsrA-binding protein n=22 Tax=Bacteria RepID=C4Z...   202   3e-51
UniRef50_A0LGB7 SsrA-binding protein n=7 Tax=Bacteria RepID=SSRP...   201   8e-51
UniRef50_B2UY12 SsrA-binding protein n=24 Tax=Bacteria RepID=SSR...   201   9e-51
UniRef50_A3ZLQ9 SsrA-binding protein n=2 Tax=Planctomycetaceae R...   199   2e-50
UniRef50_D2RBT7 SsrA-binding protein n=3 Tax=Bacteria RepID=D2RB...   198   5e-50
UniRef50_B2S2D1 SsrA-binding protein n=2 Tax=Treponema pallidum ...   198   6e-50
UniRef50_A5EXZ5 SsrA-binding protein n=4 Tax=Proteobacteria RepI...   197   9e-50
UniRef50_C0QVL0 SsrA-binding protein n=2 Tax=Brachyspira RepID=C...   196   2e-49
UniRef50_C1F4B8 SsrA-binding protein n=1 Tax=Acidobacterium caps...   196   2e-49
UniRef50_D1U5X0 SsrA-binding protein n=2 Tax=Desulfovibrio RepID...   196   2e-49
UniRef50_Q3ZZ31 SsrA-binding protein n=6 Tax=Bacteria RepID=SSRP...   196   3e-49
UniRef50_D2R3D1 SsrA-binding protein n=1 Tax=Pirellula staleyi D...   195   4e-49
UniRef50_A7HGZ0 SsrA-binding protein n=8 Tax=Bacteria RepID=SSRP...   195   5e-49
UniRef50_Q7UZP2 SsrA-binding protein n=33 Tax=cellular organisms...   195   5e-49
UniRef50_A9NF97 SsrA-binding protein n=1 Tax=Acholeplasma laidla...   194   7e-49
UniRef50_Q2GCW3 SsrA-binding protein n=2 Tax=Neorickettsia RepID...   192   3e-48
UniRef50_Q1GDQ2 SsrA-binding protein n=12 Tax=Rhodobacterales Re...   192   3e-48
UniRef50_A9G109 SsrA-binding protein n=1 Tax=Sorangium cellulosu...   192   4e-48
UniRef50_Q04E23 SsrA-binding protein n=4 Tax=Lactobacillales Rep...   191   6e-48
UniRef50_Q7UH38 SsrA-binding protein n=1 Tax=Rhodopirellula balt...   191   6e-48
UniRef50_A6G542 SsrA-binding protein n=2 Tax=Proteobacteria RepI...   191   6e-48
UniRef50_Q1MRU5 SsrA-binding protein n=5 Tax=Desulfovibrionales ...   191   6e-48
UniRef50_C1ZDG5 SsrA-binding protein n=1 Tax=Planctomyces limnop...   190   2e-47
UniRef50_D2PSC9 SsrA-binding protein n=1 Tax=Kribbella flavida D...   189   2e-47
UniRef50_Q1IQ53 SsrA-binding protein n=1 Tax=Candidatus Koribact...   189   2e-47
UniRef50_B2KCF8 SsrA-binding protein n=1 Tax=Elusimicrobium minu...   189   3e-47
UniRef50_Q9Z8K1 SsrA-binding protein n=2 Tax=Chlamydophila pneum...   188   5e-47
UniRef50_Q254F5 SsrA-binding protein n=1 Tax=Chlamydophila felis...   188   5e-47
UniRef50_B2ULK9 SsrA-binding protein n=3 Tax=Verrucomicrobia Rep...   188   6e-47
UniRef50_Q2S237 SsrA-binding protein n=1 Tax=Salinibacter ruber ...   188   6e-47
UniRef50_A5FZS6 SsrA-binding protein n=11 Tax=Alphaproteobacteri...   187   8e-47
UniRef50_D1NAK5 SsrA-binding protein n=1 Tax=Victivallis vadensi...   185   3e-46
UniRef50_C7JH78 Trans-translation helper factor SmpB n=8 Tax=Ace...   185   3e-46
UniRef50_C9LGK2 SsrA-binding protein n=8 Tax=Prevotella RepID=C9...   184   6e-46
UniRef50_C2D8P0 TmRNA-binding protein n=2 Tax=Coriobacteriaceae ...   184   6e-46
UniRef50_A9BF44 SsrA-binding protein n=3 Tax=Bacteria RepID=SSRP...   184   7e-46
UniRef50_C6HYH8 SsrA-binding protein n=1 Tax=Leptospirillum ferr...   184   1e-45
UniRef50_A6DIW5 SsrA-binding protein n=2 Tax=Bacteria RepID=A6DI...   183   1e-45
UniRef50_Q6MAG8 SsrA-binding protein n=4 Tax=Chlamydiales RepID=...   183   2e-45
UniRef50_A0FD64 TmRNA-binding protein n=1 Tax=Coxiella endosymbi...   182   2e-45
UniRef50_B3DV24 TmRNA-binding protein n=1 Tax=Methylacidiphilum ...   182   3e-45
UniRef50_B9XT05 SsrA-binding protein n=1 Tax=bacterium Ellin514 ...   182   3e-45
UniRef50_A6L927 SsrA-binding protein n=17 Tax=Bacteria RepID=SSR...   182   4e-45
UniRef50_Q83N13 SsrA-binding protein n=2 Tax=Tropheryma whipplei...   181   5e-45
UniRef50_B2GAM5 SsrA-binding protein n=4 Tax=Bacteria RepID=SSRP...   181   5e-45
UniRef50_Q04TV5 SsrA-binding protein n=6 Tax=Leptospira RepID=SS...   181   5e-45
UniRef50_D1VZH7 SsrA-binding protein n=1 Tax=Prevotella timonens...   180   1e-44
UniRef50_C0JZT0 SsrA-binding protein n=1 Tax=uncultured bacteriu...   180   1e-44
UniRef50_Q6MQ46 SsrA-binding protein n=1 Tax=Bdellovibrio bacter...   180   1e-44
UniRef50_C9RKN3 SsrA-binding protein n=1 Tax=Fibrobacter succino...   179   2e-44
UniRef50_Q02A69 SsrA-binding protein n=1 Tax=Candidatus Solibact...   179   3e-44
UniRef50_B8D947 SsrA-binding protein n=4 Tax=Buchnera aphidicola...   179   4e-44
UniRef50_A8EWH6 SsrA-binding protein n=48 Tax=Epsilonproteobacte...   177   7e-44
UniRef50_C5JAN1 SsrA-binding protein n=1 Tax=uncultured bacteriu...   177   8e-44
UniRef50_Q2ST23 SsrA-binding protein n=4 Tax=Mollicutes RepID=SS...   177   1e-43
UniRef50_Q3ARF1 SsrA-binding protein n=11 Tax=Chlorobiaceae RepI...   177   1e-43
UniRef50_B1AI43 SsrA-binding protein n=16 Tax=Mycoplasmataceae R...   177   1e-43
UniRef50_B7KVC8 SsrA-binding protein n=25 Tax=cellular organisms...   176   2e-43
UniRef50_A0M3P0 SsrA-binding protein n=13 Tax=Bacteroidetes RepI...   174   7e-43
UniRef50_B7GAQ2 Predicted protein (Fragment) n=3 Tax=Bacillariop...   172   2e-42
UniRef50_B3EUI8 SsrA-binding protein n=4 Tax=Bacteroidetes RepID...   172   4e-42
UniRef50_Q11TP3 SsrA-binding protein n=36 Tax=Bacteroidetes RepI...   169   3e-41
UniRef50_B1GZD8 SsrA-binding protein SmpB n=1 Tax=uncultured Ter...   167   1e-40
UniRef50_Q6Q8U8 Predicted SsrA n=1 Tax=uncultured marine gamma p...   166   2e-40
UniRef50_UPI00016992A0 SsrA-binding protein n=1 Tax=Endoriftia p...   165   3e-40
UniRef50_Q89AM9 SsrA-binding protein n=1 Tax=Buchnera aphidicola...   165   4e-40
UniRef50_P75043 SsrA-binding protein n=2 Tax=Mycoplasma RepID=SS...   164   8e-40
UniRef50_B1VAG4 SsrA-binding protein n=2 Tax=Candidatus Phytopla...   164   1e-39
UniRef50_C6X237 TmRNA-binding protein SmpB n=2 Tax=Flavobacteria...   164   1e-39
UniRef50_Q1LSR7 SsrA-binding protein n=17 Tax=Gammaproteobacteri...   162   4e-39
UniRef50_Q0SPD1 SsrA-binding protein n=20 Tax=Borrelia RepID=SSR...   159   3e-38
UniRef50_Q7VRQ2 TmRNA-binding protein n=2 Tax=Candidatus Blochma...   157   9e-38
UniRef50_A5KSW6 SsrA-binding protein n=2 Tax=candidate division ...   157   2e-37
UniRef50_Q6YR70 SsrA-binding protein n=3 Tax=Candidatus Phytopla...   156   3e-37
UniRef50_Q601U1 SsrA-binding protein n=3 Tax=Mycoplasma hyopneum...   153   2e-36
UniRef50_B3PM30 SsrA-binding protein n=2 Tax=Mycoplasma RepID=B3...   151   9e-36
UniRef50_Q6KI26 SsrA-binding protein n=1 Tax=Mycoplasma mobile R...   149   3e-35
UniRef50_A9G6R4 SmpB-like protein n=1 Tax=Sorangium cellulosum '...   149   4e-35
UniRef50_Q7NB37 SsrA-binding protein n=1 Tax=Mycoplasma gallisep...   148   6e-35
UniRef50_Q057R8 TmRNA-binding protein n=1 Tax=Buchnera aphidicol...   147   1e-34
UniRef50_C1D1M8 Putative SsrA-binding protein n=1 Tax=Deinococcu...   144   1e-33
UniRef50_A5IZI0 SsrA-binding protein n=3 Tax=Mycoplasma RepID=SS...   141   9e-33
UniRef50_Q8D389 SmpB protein n=1 Tax=Wigglesworthia glossinidia ...   138   4e-32
UniRef50_A8Z637 SsrA (TmRNA)-binding protein n=2 Tax=Candidatus ...   133   2e-30
UniRef50_Q4A5T2 SsrA-binding protein n=2 Tax=Mycoplasma RepID=SS...   128   4e-29
UniRef50_D0N0I1 Putative uncharacterized protein n=1 Tax=Phytoph...   125   5e-28
UniRef50_C6SHY7 SsrA-binding protein n=1 Tax=Neisseria meningiti...   122   4e-27
UniRef50_C7LKD3 SsrA (TmRNA)-binding protein n=1 Tax=Candidatus ...    88   1e-16
UniRef50_Q7P475 Small protein B n=1 Tax=Fusobacterium nucleatum ...    84   2e-15
UniRef50_UPI0001912596 SsrA-binding protein n=1 Tax=Salmonella e...    65   6e-10

Sequences not found previously or not previously below threshold:

UniRef50_Q05FT0 Putative uncharacterized protein n=1 Tax=Candida...    43   0.003


CONVERGED!
>UniRef50_B5F2A0 SsrA-binding protein n=362 Tax=Proteobacteria RepID=SSRP_SALA4
          Length = 160

 Score =  238 bits (609), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 151/160 (94%), Positives = 157/160 (98%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANI DSYV+L+D
Sbjct: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANIGDSYVILKD 60

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GEA+LFGAN TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGR+NREGYTVVALSLYWKN
Sbjct: 61  GEAWLFGANFTPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRINREGYTVVALSLYWKN 120

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           AWCKVKIGVAKGKKQHDKRSD+KEREWQ+DKARIMKNA R
Sbjct: 121 AWCKVKIGVAKGKKQHDKRSDLKEREWQLDKARIMKNAGR 160


>UniRef50_Q3MAP3 SsrA-binding protein n=12 Tax=Cyanobacteria RepID=SSRP_ANAVT
          Length = 155

 Score =  226 bits (576), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 72/155 (46%), Positives = 96/155 (61%)

Query: 4   KKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEA 63
                     I  N++AR+ Y I E FEAG+ L G EVKS+RAGK N+ D Y LLRDGE 
Sbjct: 1   MSDKSESYKVITDNRQARYLYEILETFEAGIQLTGTEVKSIRAGKVNLQDGYALLRDGEI 60

Query: 64  FLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWC 123
           +L  A+I+P   +  +   +P RTRKLLL+++E+  L G+V ++G T+V L +Y K  W 
Sbjct: 61  WLINAHISPYNASGQYFNHEPRRTRKLLLHRQEIRKLIGKVEQQGLTLVPLKMYLKRGWV 120

Query: 124 KVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
           KV I + KGKK HDKR  +K R+ Q D  R MKN 
Sbjct: 121 KVSIALGKGKKLHDKRESLKRRQDQRDIQRAMKNY 155


>UniRef50_A5UPS2 SsrA-binding protein n=171 Tax=Bacteria RepID=SSRP_ROSS1
          Length = 158

 Score =  224 bits (572), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 71/150 (47%), Positives = 102/150 (68%)

Query: 11  SATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI 70
              +A N++ARH+YFIEE +EAG+AL G E+KS+RAG+ N+   YV + DGEA+L+  +I
Sbjct: 8   ERVVADNRKARHDYFIEETYEAGIALTGSEIKSIRAGQVNLRGGYVRIVDGEAWLYDVHI 67

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVA 130
            P   +  +   +PTR RKLLL++RE+  + G+V R+GYT+V L LY +    KV+IG+A
Sbjct: 68  APYEQSGAYFNHEPTRPRKLLLHRREISRIAGQVERQGYTLVPLRLYLRGRRAKVEIGLA 127

Query: 131 KGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           +GKK +DKR DI  RE + D  R +K   R
Sbjct: 128 RGKKLYDKRDDIARREARRDIERALKERTR 157


>UniRef50_A9WJ45 SsrA-binding protein n=32 Tax=Bacteria RepID=SSRP_CHLAA
          Length = 160

 Score =  218 bits (556), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 71/158 (44%), Positives = 100/158 (63%), Gaps = 2/158 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           MT  K   PG   +A N++ARH+Y IEE  EAG+ L G E+KS+RAG+ N+  S+  + D
Sbjct: 1   MTATKHKHPG--VVAENRKARHDYDIEETIEAGIVLSGSEIKSVRAGRVNLRGSFARVID 58

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
            E FL+ A+I P   +  +   DP R RKLLL++RE++ L G V  +G T+V L +Y+K 
Sbjct: 59  DEVFLYDAHIAPYEQSGKYFNHDPMRPRKLLLHRREINRLNGLVRMKGMTLVPLKVYFKG 118

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
              KV++GVA+GKK +DKR DI  R+   D  R +K A
Sbjct: 119 RRAKVELGVARGKKIYDKREDIARRDAARDIDRALKRA 156


>UniRef50_A4J8T4 SsrA-binding protein n=14 Tax=Bacteria RepID=SSRP_DESRM
          Length = 161

 Score =  215 bits (549), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 65/161 (40%), Positives = 101/161 (62%), Gaps = 2/161 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M  K   + G  TI  N+RARHEY + E +EAG+AL G EVKSLRAGKAN+ D++  + +
Sbjct: 1   MAAKATSEKGFKTITDNRRARHEYHVIETYEAGIALSGTEVKSLRAGKANLQDAFARVEN 60

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK- 119
           GE  L+  +I+P    +     +P RTR+LL++++E+  LYG+V  +G  ++ L +Y+  
Sbjct: 61  GEMMLYNLHISPYEQGN-RFNHEPKRTRRLLMHKQEILRLYGKVREKGLALIPLKVYFNP 119

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
               KV++ +A+GKK +DKR DI  R+ + D  R M+   +
Sbjct: 120 RGKVKVQLALAQGKKSYDKRHDIAARDAKRDMDRAMRERQK 160


>UniRef50_A1TSJ4 SsrA-binding protein n=6 Tax=Proteobacteria RepID=SSRP_ACIAC
          Length = 157

 Score =  214 bits (547), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 78/160 (48%), Positives = 104/160 (65%), Gaps = 3/160 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M KK         IA NK+A   YF EE  EAG+ L GWEVK+LR GK  ++D YV++R+
Sbjct: 1   MAKKPETLSR---IADNKKAAFNYFFEERHEAGMVLHGWEVKALREGKVQLTDGYVVIRE 57

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GE +L G  I P+  ASTHV  D  RT+KLLL++ E+  L  +V ++GYT+V L+L+W N
Sbjct: 58  GELYLIGCQINPLKTASTHVSPDAVRTKKLLLHKDEIKRLTAKVEQKGYTLVPLNLHWTN 117

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
              K +I +AKGK +HDKR  IKERE + +  R MK+ HR
Sbjct: 118 GRAKCEIALAKGKAEHDKRDTIKEREGKREVERAMKSRHR 157


>UniRef50_A0PYP8 SsrA-binding protein n=125 Tax=Bacteria RepID=SSRP_CLONN
          Length = 157

 Score =  214 bits (547), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 74/160 (46%), Positives = 103/160 (64%), Gaps = 4/160 (2%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M KK      + T+A N++A H+YFIEE FEAG+AL G EVKS+R GKAN+ DSY  +R+
Sbjct: 1   MGKKDKK---NNTLAQNRKAYHDYFIEETFEAGIALVGTEVKSIRGGKANLKDSYASIRN 57

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GE F+   +++P    +     DP R RKLLL++ ++++L G   ++GYT++ LSLY KN
Sbjct: 58  GEVFVCNMHVSPYEQGNI-FNRDPLRERKLLLHKSQINTLLGYTAQQGYTLIPLSLYLKN 116

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
              KV +GVAKGKK +DKR  I  +  + D  R MK   R
Sbjct: 117 GRVKVALGVAKGKKNYDKRDAIAAKAAKRDIDRQMKERMR 156


>UniRef50_Q12AT7 SsrA-binding protein n=8 Tax=Burkholderiales RepID=SSRP_POLSJ
          Length = 149

 Score =  214 bits (547), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 73/147 (49%), Positives = 103/147 (70%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           IA NK+A   Y IEE FEAG+ L+GWEVKS+R GK  ++D YV++R GE F+ G  I P+
Sbjct: 3   IADNKKAIFNYHIEERFEAGMVLEGWEVKSVREGKVQLTDGYVVIRGGELFIIGCQINPL 62

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGK 133
             ASTHV  D  RT+KLL+++ E+  L G+V ++G+T+V L+++WK    K +IG+AKGK
Sbjct: 63  GTASTHVRPDSVRTKKLLMHKDEIRRLVGKVEQKGFTLVPLNMHWKAGKVKCEIGLAKGK 122

Query: 134 KQHDKRSDIKEREWQVDKARIMKNAHR 160
            +HDKR  IK+RE + +  R MK+  R
Sbjct: 123 GEHDKRDTIKDREGKREVERAMKSRSR 149


>UniRef50_B7IP12 SsrA-binding protein n=102 Tax=Bacteria RepID=SSRP_BACC2
          Length = 155

 Score =  214 bits (546), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 67/153 (43%), Positives = 101/153 (66%), Gaps = 1/153 (0%)

Query: 8   KPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFG 67
           K     IA NK+A H+YFIEE +EAGL LQG E+KS+RAG+ N+ D++  + +GE ++  
Sbjct: 3   KGTGKVIAQNKKAFHDYFIEETYEAGLVLQGTEIKSIRAGRVNLKDAFARIHNGEVWVHN 62

Query: 68  ANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKI 127
            +I      +     DP RTRKLLL+++E+D L G     GY +V L +Y KN + K+ +
Sbjct: 63  MHINTYEQGN-RFNHDPLRTRKLLLHKKEIDKLAGAAKETGYALVPLRIYLKNGFAKMAL 121

Query: 128 GVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           G+AKGKKQ+DKR D+KE+E + + AR+ ++  +
Sbjct: 122 GLAKGKKQYDKRHDLKEKEAKREIARVFRDRQK 154


>UniRef50_Q3JBU6 SsrA-binding protein n=47 Tax=Proteobacteria RepID=SSRP_NITOC
          Length = 189

 Score =  213 bits (544), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 77/145 (53%), Positives = 109/145 (75%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             IALN++ARH+YFIEE +EAGL L+GWEVKSLRAG+  +++ Y LL+ GE +LFG +++
Sbjct: 14  NVIALNRKARHDYFIEERYEAGLVLEGWEVKSLRAGRVQLNEGYCLLKGGEVWLFGVHLS 73

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
           P+   STH+  DP RTRKLLL+ +EL  L G V R+GY ++ L+LYWK    K++I +AK
Sbjct: 74  PLNTVSTHIHPDPLRTRKLLLHAKELRKLIGAVERKGYALIPLTLYWKRGRVKLEIALAK 133

Query: 132 GKKQHDKRSDIKEREWQVDKARIMK 156
           GK+++DKR+  KE+EW   K R++K
Sbjct: 134 GKQKYDKRATEKEKEWTRQKERLLK 158


>UniRef50_A0QU63 SsrA-binding protein n=25 Tax=Bacteria RepID=SSRP_MYCS2
          Length = 161

 Score =  212 bits (542), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 60/160 (37%), Positives = 98/160 (61%), Gaps = 2/160 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           MTKK A    +  +A N++ARH Y I + +EAG+ L G EVKSLR G+A+++D++  + D
Sbjct: 1   MTKKSAS-SNNKVVATNRKARHNYTILDTYEAGIVLMGTEVKSLREGQASLADAFATVDD 59

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GE +L   +I       T     P R RKLLL+++++D+L G++     T+V LS+Y+ +
Sbjct: 60  GEIWLRNVHIAEY-HHGTWTNHAPRRNRKLLLHRKQIDNLIGKIRDGNLTLVPLSIYFTD 118

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
              KV++ +A+GK+ HDKR D+  R+ Q +  R +    +
Sbjct: 119 GKVKVELALARGKQAHDKRQDLARRDAQREVIRELGRRAK 158


>UniRef50_A3PWV5 SsrA-binding protein n=83 Tax=cellular organisms RepID=SSRP_MYCSJ
          Length = 168

 Score =  211 bits (538), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 59/155 (38%), Positives = 93/155 (60%), Gaps = 1/155 (0%)

Query: 6   AHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFL 65
                +  +A N+RARH Y I + +EAG+AL G EVKSLR G+A+++D++  + DGE +L
Sbjct: 12  TKDRNNQVVASNRRARHNYAILDTYEAGIALMGTEVKSLRDGQASLADAFATVDDGEIWL 71

Query: 66  FGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKV 125
              +I      S      P R RKLLL++RE+D+L G++     T+V LSLY+     KV
Sbjct: 72  RNLHIPEYQHGS-WTNHAPRRNRKLLLHRREIDNLIGKIRDGNLTLVPLSLYFTGGKVKV 130

Query: 126 KIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           ++ +A+GK+ HDKR D+  R+ + +  R +    +
Sbjct: 131 ELALARGKQAHDKRQDLARRDAEREVVRELGRRAK 165


>UniRef50_Q2RLS9 SsrA-binding protein n=8 Tax=Clostridia RepID=SSRP_MOOTA
          Length = 155

 Score =  211 bits (538), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 62/150 (41%), Positives = 95/150 (63%), Gaps = 2/150 (1%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             +  N+RARH+YFIEE +EAG+AL G EVKSLR G+ANI DSY  + +GE  L   +I+
Sbjct: 6   KVVTDNRRARHDYFIEETYEAGIALTGTEVKSLRNGRANIKDSYARVENGELILHDMHIS 65

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NAWCKVKIGVA 130
           P    +     +P R R+LL+++ E+  LYG+V  +G T++ L +Y+      KV++ + 
Sbjct: 66  PYEQGN-RFNHEPRRPRRLLMHRYEIQRLYGKVREKGLTLIPLKVYFNERGLAKVELALV 124

Query: 131 KGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           KGK+ +DKR DI  R+ Q + AR ++   +
Sbjct: 125 KGKRLYDKREDIAARDAQREIARALRERQK 154


>UniRef50_C9KNB2 SsrA-binding protein n=1 Tax=Mitsuokella multacida DSM 20544
           RepID=C9KNB2_9FIRM
          Length = 157

 Score =  211 bits (537), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 66/160 (41%), Positives = 103/160 (64%), Gaps = 4/160 (2%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M +K A   G  T+  N++ARH+YFI E +EAG+ALQG EVKSLRAG+AN+ DSY  +++
Sbjct: 1   MGRKNA---GIKTVCENRKARHDYFIHETYEAGIALQGTEVKSLRAGRANLKDSYASIQN 57

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GE F+   +I+P    +     DP R RKLL+++ E+  L+ +   +G+T+V L +Y+K 
Sbjct: 58  GEIFVENLHISPYDQGNI-FNHDPLRRRKLLMHKAEIVKLFAKTREKGFTLVPLKIYFKQ 116

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
              K++I +A GK  +DKR D+ E+  + +  R +K+  R
Sbjct: 117 GRAKMEIALASGKHNYDKRQDLHEKAAKREIERALKDRQR 156


>UniRef50_A5G3A5 SsrA-binding protein n=5 Tax=Bacteria RepID=SSRP_GEOUR
          Length = 151

 Score =  211 bits (537), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 72/151 (47%), Positives = 106/151 (70%), Gaps = 1/151 (0%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
               I  NK+A H+YFIEE+FEAG+ L+G EVKSLR GKAN++DS+ L+++GEAFL   +
Sbjct: 2   SEKLICNNKKAYHDYFIEEKFEAGMVLKGTEVKSLRIGKANLNDSFALVKNGEAFLHNLH 61

Query: 70  ITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGV 129
           I+P    +     DP R RKLLL+++E+  L+  +  +GYTVV L LY+K+   KV++G+
Sbjct: 62  ISPYDFGNRE-NHDPDRMRKLLLHKKEIGKLFSMIREQGYTVVPLRLYFKDGLVKVEVGL 120

Query: 130 AKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           AKGKK +DKR D+K+++ + D A  +K  +R
Sbjct: 121 AKGKKLYDKREDMKKKDMRRDVAVALKERNR 151


>UniRef50_A1WX40 SsrA-binding protein n=13 Tax=Gammaproteobacteria RepID=SSRP_HALHL
          Length = 165

 Score =  210 bits (536), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 87/154 (56%), Positives = 121/154 (78%)

Query: 5   KAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAF 64
           K+ K     IALN++A  ++F+EE  EAGLAL+GWEVK+LRA + N+++S+VL+R GEA+
Sbjct: 10  KSKKTEGNVIALNRKAGFDFFVEERLEAGLALEGWEVKALRAKRVNLTESHVLVRRGEAW 69

Query: 65  LFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCK 124
           L G NITP++ ASTH+  DPTRTRKLLL++RE++ L G V+R+GYTVV L LYWK    K
Sbjct: 70  LIGCNITPLSTASTHIHPDPTRTRKLLLHRREINRLIGAVDRDGYTVVPLKLYWKRGRAK 129

Query: 125 VKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
           ++IGVAKGKK+ DKR+D KE++WQ  + R++K+ 
Sbjct: 130 IEIGVAKGKKKQDKRADKKEQDWQRQRERLLKHK 163


>UniRef50_B1MEU3 SsrA-binding protein n=68 Tax=Bacteria RepID=SSRP_MYCA9
          Length = 159

 Score =  209 bits (534), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 63/160 (39%), Positives = 95/160 (59%), Gaps = 3/160 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M+KK A   G   IA N++ARH Y I + +EAG+ L G EVK+LR GKA++ D++  + D
Sbjct: 1   MSKKPAD--GRKVIATNRKARHNYSIIDVYEAGVQLVGTEVKTLREGKASLVDAFATVDD 58

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GE +L G +I       T     P R RKLLL++ ++D L G+      T+V LSLY+ +
Sbjct: 59  GEVWLRGVHIPQYDH-GTWTNHAPLRNRKLLLHRAQIDMLVGKTRDGNLTLVPLSLYFLD 117

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
              KV++ +A+GK+ HDKR DI +R+   +  R +    +
Sbjct: 118 GKVKVELALARGKQAHDKRQDIAKRDASREITRELGRRAK 157


>UniRef50_C8W8A6 SsrA-binding protein n=5 Tax=Coriobacteriaceae RepID=C8W8A6_ATOPD
          Length = 161

 Score =  209 bits (534), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 61/161 (37%), Positives = 98/161 (60%), Gaps = 2/161 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M + +  + G  +IA N+ ARHEY I E FE GL L G EVKSLR     ++D++ L+RD
Sbjct: 1   MAENQVKQQGKKSIARNRSARHEYEIGETFECGLVLTGTEVKSLRERGCQLTDTFCLIRD 60

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-K 119
           GEA++ G ++ P          DP R RKLLL++R++D L G++ ++G  +V L +Y+ +
Sbjct: 61  GEAWIHGMHLHPYTNGGVW-NVDPDRKRKLLLHRRQIDYLDGKLRQKGLALVPLEIYFDE 119

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           +   K+ I +++GKK +DKR+   +R+   +  R +K   R
Sbjct: 120 HNRVKLLIALSQGKKLYDKRASAAKRDSDREIQRALKERSR 160


>UniRef50_Q72DV1 SsrA-binding protein n=12 Tax=Bacteria RepID=SSRP_DESVH
          Length = 154

 Score =  209 bits (532), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 74/155 (47%), Positives = 95/155 (61%), Gaps = 4/155 (2%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M+KK    PG+  IA NK+ARH Y + +  EAG++L G EVKSLRAG  N  DSYV  R+
Sbjct: 1   MSKKA---PGANVIAQNKKARHIYELSDNHEAGISLTGSEVKSLRAGHVNFRDSYVDFRN 57

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GEAFL G +I P   A  +   DP R RKLLL+  E+++L   V ++GYTVV   LY+  
Sbjct: 58  GEAFLVGLHIAPYDNAG-YAQHDPDRDRKLLLHAHEIENLARSVEQKGYTVVPTKLYFAR 116

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIM 155
              KV I V +GKK HD+R D+K R    D  R +
Sbjct: 117 GKVKVDIAVGRGKKLHDQREDLKRRAEDRDTQREL 151


>UniRef50_B0TLG2 SsrA-binding protein n=12 Tax=Proteobacteria RepID=SSRP_SHEHH
          Length = 164

 Score =  208 bits (530), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 95/161 (59%), Positives = 124/161 (77%), Gaps = 3/161 (1%)

Query: 1   MTKK--KAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLL 58
           M KK  K  K  SA+IA NKRA  +Y  EE+ EAGL+L GWEVKS+R GK N+S+SYV L
Sbjct: 1   MAKKNAKNSKNSSASIARNKRATFDYKFEEKLEAGLSLMGWEVKSIRMGKVNLSESYVFL 60

Query: 59  RDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW 118
           R+GEA+LFG  I P+  AS+HVVCDP R+RKLLL ++ELD L G V+R+GY++V +S+YW
Sbjct: 61  REGEAYLFGCTIAPLNTASSHVVCDPLRSRKLLLKRKELDKLQGLVDRKGYSIVPISMYW 120

Query: 119 KNA-WCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
           +   W K++IG+ KGKK+HDKR D K+REWQ++KAR +K A
Sbjct: 121 QKGAWVKIEIGLGKGKKEHDKRDDTKDREWQIEKARTIKKA 161


>UniRef50_C7M112 SsrA-binding protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331
           RepID=C7M112_ACIFD
          Length = 171

 Score =  208 bits (530), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 63/159 (39%), Positives = 96/159 (60%), Gaps = 1/159 (0%)

Query: 2   TKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDG 61
             K     G   +A N+RARH+Y + E FEAG+ L G EVK++R G   + D+Y  +RDG
Sbjct: 8   PAKAQQLGGVRVLAQNRRARHDYDVLETFEAGIVLVGSEVKAVREGHVQLRDAYARIRDG 67

Query: 62  EAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNA 121
           E FLF A I+P   A+        R RKLLL++ E+D L GR+ +E  T++ LSLY ++ 
Sbjct: 68  ELFLFQAVISPYRHATGFGTHVTDRPRKLLLHRDEIDRLRGRLEQERLTLIPLSLYLRDG 127

Query: 122 WCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
             KV++ +AKG+  +DKR  +  R+ Q +  R +++ +R
Sbjct: 128 LVKVELALAKGRTLYDKRHVLATRDAQREVER-LRSRYR 165


>UniRef50_Q4JX42 SsrA-binding protein n=87 Tax=Bacteria RepID=SSRP_CORJK
          Length = 184

 Score =  207 bits (528), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 62/151 (41%), Positives = 94/151 (62%), Gaps = 1/151 (0%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
           G   +A N++ARH+Y I + +E G+ L G EVKSLR GKA++ D+Y  + +GE +L G +
Sbjct: 31  GQIVVATNRKARHDYHIIDTYECGVVLVGTEVKSLREGKASLVDAYATIDEGEVWLRGLH 90

Query: 70  ITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGV 129
           I   ++        P RTRKLLL++RE+DSL G+V     T+V L LY+     KV++ +
Sbjct: 91  IPEYSMGH-WTNHSPRRTRKLLLHRREIDSLMGKVRDGNNTLVPLQLYFVAGKLKVELAL 149

Query: 130 AKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           A+GK+++DKR DIK R  + +  R M    +
Sbjct: 150 ARGKQEYDKRQDIKRRTEEREITREMGRRIK 180


>UniRef50_A1WPQ3 SsrA-binding protein n=5 Tax=Proteobacteria RepID=SSRP_VEREI
          Length = 157

 Score =  207 bits (527), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 81/160 (50%), Positives = 111/160 (69%), Gaps = 3/160 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           MTKK         IA NK+A H+YF+EE +EAG+ L GWEVK+LRAGKA ++D YVL+RD
Sbjct: 1   MTKKPDPASR---IADNKKAAHDYFLEERYEAGMVLHGWEVKALRAGKAQLTDGYVLIRD 57

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GE FL G  +  +  ASTHV  +  RT+KLLL + ++  L G+V ++GYT+V L+L+WKN
Sbjct: 58  GELFLLGCQLQALKTASTHVSPEAARTKKLLLKKDDIRRLIGKVEQKGYTLVPLNLHWKN 117

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
              K +I +A+GK QHDKR+ IKERE + +  R +K+  R
Sbjct: 118 GVVKCEIALARGKAQHDKRNSIKEREGKREVERALKSRSR 157


>UniRef50_Q03AJ7 SsrA-binding protein n=110 Tax=Bacteria RepID=SSRP_LACC3
          Length = 157

 Score =  207 bits (527), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 64/159 (40%), Positives = 98/159 (61%), Gaps = 2/159 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M KK   KP +  +A NK+A H+Y I + +EAG+AL G E+KS+R GK N+ D +  +R+
Sbjct: 1   MAKKHRQKPDN-LLAQNKKAGHDYNILDTYEAGIALTGTEIKSVRDGKLNLRDGFARIRN 59

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
            EA+L   +I+P    +     DP R RKLLL++RE+  L     R+G T+V L +Y K+
Sbjct: 60  NEAWLENVHISPYKEGNL-FNVDPMRNRKLLLHKREIRKLGQMTARQGVTLVPLRMYLKH 118

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
            + KV IGVA+GK  +DKR  +K ++ + +  R +K  +
Sbjct: 119 GYAKVLIGVAEGKHNYDKRETLKRKDQEREVQRALKARY 157


>UniRef50_B8H482 SsrA-binding protein n=83 Tax=Proteobacteria RepID=SSRP_CAUCN
          Length = 152

 Score =  206 bits (526), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 77/147 (52%), Positives = 99/147 (67%), Gaps = 2/147 (1%)

Query: 11  SATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI 70
           S  IA N+RAR +YFIEE FEAG+ L G EVKSLR G+ANI++SY  +   E  L  A+I
Sbjct: 2   SKPIAENRRARFDYFIEETFEAGIMLTGTEVKSLRTGRANIAESYASVEGREIVLINADI 61

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NAWCKVKIGV 129
            P   A+     +P R RKLLL++R++D L G V REG T+V + LYW      K+++G+
Sbjct: 62  PPYGHAN-RFNHEPRRHRKLLLHRRQIDKLIGAVQREGRTLVPIKLYWNDKGLAKLEVGL 120

Query: 130 AKGKKQHDKRSDIKEREWQVDKARIMK 156
           AKGKK HDKR    ER+WQ DKAR+MK
Sbjct: 121 AKGKKLHDKRDTAAERDWQRDKARLMK 147


>UniRef50_A1KN98 SsrA-binding protein n=62 Tax=Bacteria RepID=SSRP_MYCBP
          Length = 160

 Score =  206 bits (526), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 63/156 (40%), Positives = 98/156 (62%), Gaps = 1/156 (0%)

Query: 5   KAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAF 64
           K+ + G   +A N++ARH Y I E FEAG+ALQG EVKSLR G+A+++DS+  + DGE +
Sbjct: 3   KSSRGGRQIVASNRKARHNYSIIEVFEAGVALQGTEVKSLREGQASLADSFATIDDGEVW 62

Query: 65  LFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCK 124
           L  A+I      S     +P R RKLLL++R++D+L G++    + +V LSLY+     K
Sbjct: 63  LRNAHIPEYRHGS-WTNHEPRRNRKLLLHRRQIDTLVGKIREGNFALVPLSLYFAEGKVK 121

Query: 125 VKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           V++ +A+GK+  DKR D+  R+ Q +  R +    +
Sbjct: 122 VELALARGKQARDKRQDMARRDAQREVLRELGRRAK 157


>UniRef50_A8SP47 Putative uncharacterized protein n=2 Tax=Bacteria
           RepID=A8SP47_9FIRM
          Length = 156

 Score =  206 bits (525), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 66/155 (42%), Positives = 104/155 (67%), Gaps = 1/155 (0%)

Query: 6   AHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFL 65
           + + G+  IA NK+A HEYFIEE+FEAG+ L G EVKS+R G  +I +++V +  GE ++
Sbjct: 2   SKERGNTLIANNKKAYHEYFIEEKFEAGIELVGTEVKSIRQGHCSIKEAFVGIDHGEVYV 61

Query: 66  FGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKV 125
           +  N+ P    +     DP RTRKLLL++ E++ L G+   +GYT++ L +Y K+   K+
Sbjct: 62  YRMNVNPYERGNI-FNKDPLRTRKLLLHRYEINKLIGQQKVKGYTIMPLKVYIKDGLVKM 120

Query: 126 KIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           +IG+AKGKK +DKR DI +++ + +  R +KN +R
Sbjct: 121 EIGLAKGKKLYDKREDIAKKDMKREMERDLKNRNR 155


>UniRef50_Q1H274 SsrA-binding protein n=29 Tax=Bacteria RepID=SSRP_METFK
          Length = 154

 Score =  205 bits (523), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 69/148 (46%), Positives = 108/148 (72%)

Query: 13  TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
           +IA NK+A H+YFIEE++EAG+ L+GWEVK++R  +  + ++YV+++ GE +L G ++TP
Sbjct: 2   SIAQNKKAFHDYFIEEKYEAGIVLEGWEVKAIRENRVQLKEAYVIIQRGEIYLIGCHVTP 61

Query: 73  MAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKG 132
           +  ASTHV  D  RTRKLLL+  ++  L G+V R GYT+V L +++     KV+IG+AKG
Sbjct: 62  LGSASTHVRPDAIRTRKLLLHSEQIAKLIGKVERAGYTLVPLDMHYTRGRIKVQIGLAKG 121

Query: 133 KKQHDKRSDIKEREWQVDKARIMKNAHR 160
           KKQ+DKR   KE++W+ +++ +MK   +
Sbjct: 122 KKQYDKRHSEKEKDWKREQSSLMKKYVK 149


>UniRef50_Q2N9K0 SsrA-binding protein n=85 Tax=cellular organisms RepID=SSRP_ERYLH
          Length = 160

 Score =  205 bits (522), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 75/160 (46%), Positives = 110/160 (68%), Gaps = 3/160 (1%)

Query: 1   MTKKKAHK-PGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLR 59
           M + K        T+A N+RAR +Y +E++FEAG+ALQG EVK+LRAG+A+I++SY  +R
Sbjct: 1   MARPKPETFDKQKTVAENRRARFDYAVEDKFEAGIALQGTEVKALRAGEASIAESYAEVR 60

Query: 60  DGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK 119
           DGEA+L  ANI   +  +  +   P R RKLLL+ RE++ L G V R+G T+V LS+Y+ 
Sbjct: 61  DGEAWLINANIPEYSHGN-RLNHQPRRPRKLLLHNREIERLLGAVERKGMTLVPLSIYFN 119

Query: 120 -NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
                KV++ +AKG++  DKR  IK+R+W+ DKARIM++ 
Sbjct: 120 SRGRAKVELALAKGRQAQDKREYIKDRDWKRDKARIMRDK 159


>UniRef50_D1BK11 SsrA-binding protein n=20 Tax=Bacteria RepID=D1BK11_SANKS
          Length = 176

 Score =  203 bits (518), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 62/157 (39%), Positives = 98/157 (62%), Gaps = 1/157 (0%)

Query: 2   TKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDG 61
               +  P  A IA NK+ARH++ IE+ FEAG+ L G EVK+LRAG+A++ D YV +   
Sbjct: 18  KAPASSGPVRALIASNKKARHDFAIEDVFEAGMVLSGTEVKALRAGRASLVDGYVNIEGN 77

Query: 62  EAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNA 121
           EA+L GA+I+  A   T     P R RKLLL++ E++ L      +G+T+V L +Y+ + 
Sbjct: 78  EAWLEGAHISEYAH-GTWTNHAPRRKRKLLLHRSEIERLAQGTREKGFTIVPLQMYFLDG 136

Query: 122 WCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
             KV+I +A+GKK++DKR  ++E++   +  R ++  
Sbjct: 137 RAKVEIALARGKKEYDKRQTLREQQDNREAHRAIRQR 173


>UniRef50_B2V9T6 SsrA-binding protein n=7 Tax=Bacteria RepID=SSRP_SULSY
          Length = 152

 Score =  203 bits (518), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 64/151 (42%), Positives = 98/151 (64%), Gaps = 1/151 (0%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
               +A NK+A H+Y I E++EAG+ L G EVKSLR G  N+ DS+V++ DGEA+L+   
Sbjct: 2   SEKVVATNKKAFHDYAILEKYEAGIVLTGSEVKSLREGACNLKDSFVMIEDGEAWLYNCY 61

Query: 70  ITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGV 129
           I P   A+     DPTR RKLLL+++E+  L G+V  +G T+V L +Y+KN   KV+I +
Sbjct: 62  IAPYKPAAK-FGHDPTRKRKLLLHKKEILKLMGKVKEKGLTIVPLRVYFKNGKAKVEIAL 120

Query: 130 AKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           AKGK +++KR  +KE++ + +  +  K   +
Sbjct: 121 AKGKVKYEKREAMKEKDMKREIEKSFKGKIK 151


>UniRef50_C8PPG5 SsrA-binding protein n=1 Tax=Treponema vincentii ATCC 35580
           RepID=C8PPG5_9SPIO
          Length = 200

 Score =  203 bits (517), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 88/149 (59%), Gaps = 1/149 (0%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             IA NK+A  +Y IEE  E G+ALQG E+KS+R G+ +  DS+  +   E +L   +I+
Sbjct: 53  KIIAKNKKAHFDYSIEETIECGIALQGTEIKSVRDGRISFPDSFAEIIRNEVWLKNFHIS 112

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
               +S     DP R +KLLL++ E+  L  +   +GYT++ L  Y K    KV +G+ K
Sbjct: 113 EYVYSSI-FNHDPDRPKKLLLHKDEIKRLTRKTEEKGYTLIPLEFYLKRGRIKVMLGICK 171

Query: 132 GKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           GKKQ DKR+DIKER+ + D  R +   +R
Sbjct: 172 GKKQFDKRADIKERDIKRDMQRELHLKNR 200


>UniRef50_C4Z0S0 SsrA-binding protein n=22 Tax=Bacteria RepID=C4Z0S0_EUBE2
          Length = 164

 Score =  202 bits (515), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 1/155 (0%)

Query: 5   KAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAF 64
           K    G+  IA NK+A  +YFIEE++EAG+ L G EVKS+RAGK +I +SY+ + +GE +
Sbjct: 8   KTSASGNRLIANNKKAYFDYFIEEKYEAGMVLHGTEVKSIRAGKCSIKESYIKIENGEVY 67

Query: 65  LFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCK 124
           + G NITP    +     DP R +KLLL++ +++ L G +  +GYT+V L +Y K    K
Sbjct: 68  VLGMNITPYEKGNI-FNKDPLRPKKLLLHKNQINKLTGELTIKGYTLVPLQVYLKEGKVK 126

Query: 125 VKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
           ++IG+ KGKK  DKR  I +++   D  +  KN +
Sbjct: 127 MEIGLGKGKKNFDKRDSIAKKDQIRDAQKEFKNKN 161


>UniRef50_A0LGB7 SsrA-binding protein n=7 Tax=Bacteria RepID=SSRP_SYNFM
          Length = 161

 Score =  201 bits (511), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 68/161 (42%), Positives = 96/161 (59%), Gaps = 2/161 (1%)

Query: 1   MTKKK-AHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLR 59
           MTK K +    +  I  NK+A H+Y I E+FEAG+ L G EVKSLR G+AN+ DSY  +R
Sbjct: 1   MTKNKPSTAEKTRLICQNKKAYHDYDILEKFEAGIVLLGTEVKSLREGRANLKDSYARVR 60

Query: 60  DGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK 119
            GE FL G +I+P   AS +   +P R RKLLL+  E+  L G+    G  ++ L LY+ 
Sbjct: 61  KGEVFLQGLHISPYTHAS-YNNHEPERVRKLLLHAHEIKRLTGKTQERGLALIPLKLYFS 119

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
               KV++ +A+GKK +DKR  IK +E   +  R+ K   +
Sbjct: 120 KGKVKVELALAQGKKLYDKRESIKRKEENRELDRLRKRRRQ 160


>UniRef50_B2UY12 SsrA-binding protein n=24 Tax=Bacteria RepID=SSRP_CLOBA
          Length = 156

 Score =  201 bits (511), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 68/154 (44%), Positives = 99/154 (64%), Gaps = 1/154 (0%)

Query: 7   HKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLF 66
            K  S T+A N++ARHEYFIEE  EAG+AL G EVKS+R G+AN+ +SY  +R+GE F+ 
Sbjct: 3   RKKSSNTLAENRKARHEYFIEETIEAGIALVGTEVKSIRNGRANLKESYADIRNGEIFIL 62

Query: 67  GANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVK 126
             +I+P    +     +P R +KLLL++ E+  L G V+R+GYT++ L+LY K    KV 
Sbjct: 63  SMHISPYEQGNI-FNVEPLREKKLLLHKSEIHRLAGLVSRDGYTLIPLTLYLKAGKVKVA 121

Query: 127 IGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           +G+ KGKK +DKR  + E+    +  R +K   R
Sbjct: 122 LGICKGKKDYDKRDSMLEKAHNREMQRALKERSR 155


>UniRef50_A3ZLQ9 SsrA-binding protein n=2 Tax=Planctomycetaceae RepID=A3ZLQ9_9PLAN
          Length = 176

 Score =  199 bits (507), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 52/148 (35%), Positives = 85/148 (57%)

Query: 11  SATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI 70
              I  N++ARH+Y I +  E G+ L G EVK+LR GK ++ +++  +  GE FL    I
Sbjct: 28  ERPIGENRKARHDYEIIDTLECGIQLVGSEVKTLRDGKVSLGEAFARVLRGEVFLVNCEI 87

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVA 130
                 S  +   P R RKLLL + E+     +   +G ++V L +Y+K    KV +G+ 
Sbjct: 88  PEYRNTSMFLNHVPKRPRKLLLRKSEIVKFAAKSEDKGLSIVPLKMYFKRGLVKVLLGIG 147

Query: 131 KGKKQHDKRSDIKEREWQVDKARIMKNA 158
           +G+KQHDKR  +K+++ + D AR+M++ 
Sbjct: 148 RGRKQHDKRDKLKQQDAKRDIARVMRSR 175


>UniRef50_D2RBT7 SsrA-binding protein n=3 Tax=Bacteria RepID=D2RBT7_GARVA
          Length = 165

 Score =  198 bits (504), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 69/160 (43%), Positives = 103/160 (64%), Gaps = 3/160 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLL-R 59
           M  K A   G+ T+A N++A H+Y IE+ +EAGLAL G EVKSLR G+A++++S+V + R
Sbjct: 1   MANKPAQ-DGTVTVAQNRKAHHDYVIEDCYEAGLALTGTEVKSLREGRASLAESFVNIDR 59

Query: 60  DGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK 119
            GE +L GANI    +  T     P R RKLLL+  E+  L  +   +GYTVV L LY+K
Sbjct: 60  RGEMWLEGANIPEY-LNGTWNNHAPKRKRKLLLHAAEIAKLSRQTEAKGYTVVPLRLYFK 118

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
            ++ KV+I +A+GKK+ DKR  ++E + + +  R M+  +
Sbjct: 119 GSYVKVEIALARGKKEFDKRQALREEQDKREALREMRYRN 158


>UniRef50_B2S2D1 SsrA-binding protein n=2 Tax=Treponema pallidum RepID=SSRP_TREPS
          Length = 154

 Score =  198 bits (504), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 56/151 (37%), Positives = 86/151 (56%), Gaps = 1/151 (0%)

Query: 9   PGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGA 68
            G+  IA N++A   Y +E+  E G+AL+G EVKS+RAG  +  D++  +R GE +L   
Sbjct: 4   TGTHLIAKNRKAFFNYHVEDRLECGIALEGTEVKSVRAGHLSFPDAFAEMRGGELWLKNV 63

Query: 69  NITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIG 128
           +I     A +    +P R RKLL ++ ++  L  +V  +GYT+V L  Y K    KV +G
Sbjct: 64  HIAEYVHACS-FAPNPDRMRKLLAHRDQIARLKRKVEEKGYTLVPLEFYLKAGRVKVALG 122

Query: 129 VAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
           + KGKK  DKR+ IK R+   + +R +   H
Sbjct: 123 ICKGKKLFDKRAQIKARDNARELSRSLCERH 153


>UniRef50_A5EXZ5 SsrA-binding protein n=4 Tax=Proteobacteria RepID=SSRP_DICNV
          Length = 159

 Score =  197 bits (502), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 76/160 (47%), Positives = 113/160 (70%), Gaps = 3/160 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M+KK         I  NK+  H+YF+EE FEAG+AL+GWEVK++RAG+  I +SY+L++D
Sbjct: 1   MSKKNT---ADNHIVTNKKVFHDYFLEEHFEAGIALEGWEVKAVRAGRIQIKESYILVKD 57

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
            + +LFGA I P+A AS+H+  +  RTRKLLL++ ++  L G   R+GYT++ +SLYWKN
Sbjct: 58  QQVYLFGALIHPLASASSHIFPEAQRTRKLLLHRYQIAKLIGASERDGYTLMPVSLYWKN 117

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
            + KV + +AKGKK+ DKR   K+++W+  ++RIMK   R
Sbjct: 118 GFVKVDVAIAKGKKEFDKRQVKKDQDWKKTQSRIMKAHKR 157


>UniRef50_C0QVL0 SsrA-binding protein n=2 Tax=Brachyspira RepID=C0QVL0_BRAHW
          Length = 161

 Score =  196 bits (500), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 65/161 (40%), Positives = 92/161 (57%), Gaps = 6/161 (3%)

Query: 1   MTKKKAHKPGSATI-----ALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSY 55
           M  KK  K GS TI       NK+A   Y + E+FEAG+ L G EVKSLR    N+SDSY
Sbjct: 1   MASKKDKKSGSNTISSGEIVKNKKALFNYELVEKFEAGIVLLGTEVKSLRERSVNMSDSY 60

Query: 56  VLLRDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALS 115
              + GE F+   +I+P    +     +P R RKLL+ +REL  LYG++  +G T++ + 
Sbjct: 61  ASFKKGELFIVNMHISPYHFGN-RNNHEPLRERKLLMKKRELRRLYGKIKEQGLTLIPVK 119

Query: 116 LYWKNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMK 156
           LY+     KV++ +AKGKK HDKR  +K +    +  R +K
Sbjct: 120 LYFSRGKVKVELALAKGKKLHDKRETLKRKTLDREMERYIK 160


>UniRef50_C1F4B8 SsrA-binding protein n=1 Tax=Acidobacterium capsulatum ATCC 51196
           RepID=C1F4B8_ACIC5
          Length = 176

 Score =  196 bits (500), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 67/162 (41%), Positives = 101/162 (62%), Gaps = 4/162 (2%)

Query: 2   TKKKAHKP---GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLL 58
            K K   P   G    A N+ A H YF+ E++EAG+AL+G EVKS+R GKAN+ D+Y L+
Sbjct: 15  AKPKPRDPVAAGERDAAQNRAASHNYFLLEKYEAGVALRGTEVKSIREGKANLKDAYGLI 74

Query: 59  RDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW 118
           +DGEAFL  A+I P +  + +   +  RTRKLLLNQ EL  L+G+  ++G+T++   LY+
Sbjct: 75  KDGEAFLLNAHIGPYSHGN-YTNHEALRTRKLLLNQTELKKLWGKTQQKGFTLIPTRLYF 133

Query: 119 KNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           +N   K ++ VAKGK+  DKR   ++RE   +    +  + +
Sbjct: 134 RNGRVKCELAVAKGKQDWDKRETERKREADREARAAIDRSKK 175


>UniRef50_D1U5X0 SsrA-binding protein n=2 Tax=Desulfovibrio RepID=D1U5X0_9DELT
          Length = 158

 Score =  196 bits (499), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 65/157 (41%), Positives = 91/157 (57%), Gaps = 1/157 (0%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M KKK+      TI  NK+AR  Y I E FEAG++L G EVKSLR G     D YV  RD
Sbjct: 1   MAKKKSTTT-PDTIGTNKQARRLYDILETFEAGISLLGSEVKSLRGGHVAFKDGYVQFRD 59

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
             AFL G +I P      +   DP R R+LLL++RE+  L  + +++G TV+ + +Y+  
Sbjct: 60  HSAFLVGVHIAPYEKTGEYDQHDPERPRQLLLHKREILVLKAKSDQKGLTVIPMKMYFSR 119

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKN 157
              KV IG+ KGK  H ++ D+K+R+   D AR + +
Sbjct: 120 GKIKVLIGLGKGKNVHSRKQDLKDRDIARDTARQLAD 156


>UniRef50_Q3ZZ31 SsrA-binding protein n=6 Tax=Bacteria RepID=SSRP_DEHSC
          Length = 172

 Score =  196 bits (498), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 56/153 (36%), Positives = 96/153 (62%), Gaps = 1/153 (0%)

Query: 7   HKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLF 66
           H     T+  N++A H YF+EE++EAG+ L G E+KSLR+G+ N+ D+YV  + GE +L 
Sbjct: 18  HMAEYVTLTTNRKAFHNYFLEEKYEAGIMLLGTEIKSLRSGRVNMGDAYVKPQRGELWLV 77

Query: 67  GANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVK 126
            A+I+     S H   +P R RKLL++++E+  L  +V  +G T++ + +Y KN   KV+
Sbjct: 78  NAHISAYE-CSGHTSHEPMRERKLLMHRKEIALLMSKVKEKGLTLIPVRIYLKNDIAKVE 136

Query: 127 IGVAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
           + + +GKK +DKR  + +R+ + +  R +K  +
Sbjct: 137 LSLGRGKKLYDKRDTVTKRDTERELEREVKYRN 169


>UniRef50_D2R3D1 SsrA-binding protein n=1 Tax=Pirellula staleyi DSM 6068
           RepID=D2R3D1_9PLAN
          Length = 179

 Score =  195 bits (497), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 54/151 (35%), Positives = 88/151 (58%), Gaps = 2/151 (1%)

Query: 9   PGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGA 68
           P    +A N++AR  Y I +  E G+ L G EVKSLR GK ++ ++Y  ++DG+ +L GA
Sbjct: 29  PPVTLVAENRKARFNYEILDSLECGIQLVGSEVKSLRDGKLSLDEAYARIKDGDVWLVGA 88

Query: 69  NITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-KNAWCKVKI 127
           +I     AS      P R RKLL++++++    G  + +G T+V L +Y+ +    KV I
Sbjct: 89  DIAEYKQASIW-NHAPKRPRKLLMHKQQMRKFAGTSHDKGLTLVPLKVYFTERGIAKVVI 147

Query: 128 GVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
           G+ +GKK HDKR  +K+ + + D +R  +  
Sbjct: 148 GLCRGKKLHDKRETLKKNDAKRDISRAFRKK 178


>UniRef50_A7HGZ0 SsrA-binding protein n=8 Tax=Bacteria RepID=SSRP_ANADF
          Length = 165

 Score =  195 bits (496), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 66/149 (44%), Positives = 92/149 (61%), Gaps = 1/149 (0%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             +A N+RAR ++ IE+ +EAGL L G EVKSLR G  N+SD+Y L R  E FL    I 
Sbjct: 18  KIVATNRRARFDFTIEDSWEAGLVLTGSEVKSLREGNVNLSDAYALPRGDELFLVNCRIG 77

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
               A+ H   +P R RKLL+N+ ELD + G++ + GYT+V L LY+K  W KV++G+AK
Sbjct: 78  EYKQAA-HFGHEPLRDRKLLMNRPELDRVKGKIEQRGYTLVPLRLYFKQGWAKVELGLAK 136

Query: 132 GKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           G+   D+R  I ERE + +  R +    R
Sbjct: 137 GRSHEDRRHAIAERETKREMDREISRRRR 165


>UniRef50_Q7UZP2 SsrA-binding protein n=33 Tax=cellular organisms RepID=SSRP_PROMP
          Length = 175

 Score =  195 bits (496), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 57/143 (39%), Positives = 84/143 (58%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           ++ N+ A+ +Y I E  EAG+ L G EVKS+R G  N+ D Y   RDGE  L   +I+P 
Sbjct: 32  LSENRYAKFQYEILETIEAGIELLGTEVKSIRNGSVNLRDGYCSFRDGEILLLNVHISPH 91

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGK 133
                    DP R RKLLL+++E+  L     ++G T++ LS+Y K +W K+ IG+ KGK
Sbjct: 92  KNVGPFFNHDPLRNRKLLLHKKEIVKLKYNTEKKGLTIIPLSIYLKGSWIKLTIGIGKGK 151

Query: 134 KQHDKRSDIKEREWQVDKARIMK 156
           K HDKR   K+R+ + +    +K
Sbjct: 152 KLHDKRQADKQRDIKREIKTALK 174


>UniRef50_A9NF97 SsrA-binding protein n=1 Tax=Acholeplasma laidlawii PG-8A
           RepID=SSRP_ACHLI
          Length = 149

 Score =  194 bits (495), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 66/149 (44%), Positives = 95/149 (63%), Gaps = 1/149 (0%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             I  NK+A  EYFIE++F AG+ LQG EVKS+RAGK +I+++Y+  R+GE F+   +I 
Sbjct: 2   KIITQNKKAHFEYFIEQKFVAGIKLQGSEVKSIRAGKCSINEAYITFRNGEVFILNMHIA 61

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
               AS+    + TRTRKLLLN+ E+D L G   R+G T++ L++       KV I +AK
Sbjct: 62  KFD-ASSIFNHEETRTRKLLLNRSEIDKLMGAQTRDGMTIIPLTVELHEGLIKVVIALAK 120

Query: 132 GKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           GKK  DKR  IKER+ + ++ + +K   R
Sbjct: 121 GKKLFDKRETIKERDIKREQQQSLKGKMR 149


>UniRef50_Q2GCW3 SsrA-binding protein n=2 Tax=Neorickettsia RepID=SSRP_NEOSM
          Length = 147

 Score =  192 bits (490), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 63/143 (44%), Positives = 95/143 (66%), Gaps = 2/143 (1%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             IA+NK+AR +Y + +EFEAG+ L G EVK+L+   A++++++V  R  E +L   ++ 
Sbjct: 2   KVIAINKKARFDYSLIDEFEAGIVLLGTEVKALKYHSASLNEAFVAFRRFELWLNNMHVP 61

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NAWCKVKIGVA 130
           P   AS      PTR+RKLL+++R+L+ + G V  +G T+V LS+Y   N   KVK  +A
Sbjct: 62  PYKPAS-RFNHVPTRSRKLLVHKRQLNKISGAVRTKGLTLVPLSIYVNENGLIKVKFALA 120

Query: 131 KGKKQHDKRSDIKEREWQVDKAR 153
           KGKK+HDKR DIK+R+W   +AR
Sbjct: 121 KGKKKHDKRQDIKDRDWARKQAR 143


>UniRef50_Q1GDQ2 SsrA-binding protein n=12 Tax=Rhodobacterales RepID=SSRP_SILST
          Length = 158

 Score =  192 bits (489), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 67/158 (42%), Positives = 98/158 (62%), Gaps = 3/158 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M K+K   P    IA N+RAR +Y IE++ E G+ L+G EVKSLRAG +NI++SY  + +
Sbjct: 1   MAKQKTD-PNYKVIAENRRARFDYAIEQDLECGIMLEGSEVKSLRAGGSNIAESYAAVEE 59

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK- 119
           GE +L  + I P   A      +  R RKLL++++E+  L+    R+G T+V L LY+  
Sbjct: 60  GELWLVNSYIAPYEQAKV-FKHEERRRRKLLVSRKEMADLWNATQRKGMTLVPLVLYFNH 118

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKN 157
               K+KIG+AKGKK HDKR    +R+W   K R++K+
Sbjct: 119 RGMAKIKIGIAKGKKNHDKREAQAKRDWSRQKQRLLKD 156


>UniRef50_A9G109 SsrA-binding protein n=1 Tax=Sorangium cellulosum 'So ce 56'
           RepID=SSRP_SORC5
          Length = 162

 Score =  192 bits (488), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 71/160 (44%), Positives = 102/160 (63%), Gaps = 3/160 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M K+KA +PG   IA NKRA   Y + + FEAG+ L+G EVK LRAGKA+++DS+  +  
Sbjct: 1   MPKEKA-RPGETLIARNKRAGFNYDLGDRFEAGIVLKGSEVKMLRAGKADLTDSFCTVLR 59

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GE FL G +I  MA A+      P   RKLLL++RE++ +   + REG T VA  LY+K+
Sbjct: 60  GEVFLHGVSIAAMASAA--FGHVPKGARKLLLHRREIERIDLSIAREGMTAVATRLYFKS 117

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
              KV+I +A+GKK HDKR  IKE++ + +   ++ +  R
Sbjct: 118 GLAKVEIALARGKKSHDKRETIKEQDAEREMRAVVVHGQR 157


>UniRef50_Q04E23 SsrA-binding protein n=4 Tax=Lactobacillales RepID=SSRP_OENOB
          Length = 155

 Score =  191 bits (487), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 66/159 (41%), Positives = 97/159 (61%), Gaps = 4/159 (2%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M KK  H      +A N+RA   YFI E +EAG+ L G E+KS+R G+  I D+Y+ +RD
Sbjct: 1   MAKKDKH---DDALARNRRASFNYFIGETYEAGIQLTGTEIKSVRLGQITIGDAYITVRD 57

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
            +AFL  ANI+P    +     DP R RKLLL+++E+ +L   V++EG T+V L +Y   
Sbjct: 58  QQAFLNNANISPYKQGN-QFNVDPLRRRKLLLHKKEILALDRAVSKEGKTIVPLRVYIVK 116

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
            + K+ I +  GKK +DKR  IKER+ + +  + +KN H
Sbjct: 117 GFAKILIAIGTGKKNYDKRQTIKERDLKRELGKNLKNFH 155


>UniRef50_Q7UH38 SsrA-binding protein n=1 Tax=Rhodopirellula baltica
           RepID=SSRP_RHOBA
          Length = 176

 Score =  191 bits (487), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 54/153 (35%), Positives = 86/153 (56%), Gaps = 2/153 (1%)

Query: 7   HKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLF 66
           ++P    +A N++A+  Y I +  E G+ L G EVKS+R GK ++ ++++ + +GE +L 
Sbjct: 25  NQPNITPVAENRKAKFRYEILDSVECGMMLMGSEVKSMREGKLSLDEAHIRVTNGELWLV 84

Query: 67  GANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-KNAWCKV 125
           G++I     A      DP R RKLL++ +E D   GR    G T++ L +Y+ +    K 
Sbjct: 85  GSDIAHYNNAGMW-NHDPRRPRKLLVHAKEFDKFAGRAFERGLTLIPLRVYFSERGLAKC 143

Query: 126 KIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
            +G+ KGKK HDKR  IK+RE      R M+  
Sbjct: 144 VMGLVKGKKLHDKRETIKKRESDRGLQRAMRRK 176


>UniRef50_A6G542 SsrA-binding protein n=2 Tax=Proteobacteria RepID=A6G542_9DELT
          Length = 159

 Score =  191 bits (486), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 62/148 (41%), Positives = 91/148 (61%), Gaps = 1/148 (0%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
           G   +  N++A H+Y I EE E+G+ALQG EVKS+R G+ ++ ++Y   R  E FL  A+
Sbjct: 11  GDEVLEENRKATHDYEILEELESGVALQGSEVKSIRDGRISLKEAYCQFRGDELFLLQAH 70

Query: 70  ITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGV 129
           I     A       P R RKLLL++RELD L+  V  +G T+V L +Y K+   K+ IG+
Sbjct: 71  IAEFPQAHAR-NHPPLRARKLLLHRRELDKLHDAVKTQGLTIVPLVVYLKSRRIKILIGL 129

Query: 130 AKGKKQHDKRSDIKEREWQVDKARIMKN 157
            +GKK HDKR+ IKER+ + +  R ++ 
Sbjct: 130 GRGKKVHDKRAAIKERDQKREMQRALRE 157


>UniRef50_Q1MRU5 SsrA-binding protein n=5 Tax=Desulfovibrionales RepID=SSRP_LAWIP
          Length = 155

 Score =  191 bits (486), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 63/154 (40%), Positives = 97/154 (62%), Gaps = 1/154 (0%)

Query: 6   AHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFL 65
           + K  S  +  N++ARH Y + +  EAG+ L G EVKSLR+G A+  DSYV  + GE ++
Sbjct: 2   SAKKNSHLVFENRKARHLYDLLDFLEAGIVLTGPEVKSLRSGHASFQDSYVDFKQGEGYI 61

Query: 66  FGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKV 125
            G +I P   A  +V+ +P R RKLLL+++EL  L  +V ++G T+V L LY+KN   K 
Sbjct: 62  VGLHIPPYNNAG-YVIQNPDRPRKLLLHRQELKMLASKVEQKGLTIVPLKLYFKNRKVKT 120

Query: 126 KIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
           +I +AKG+K +D R+++K+R   +D  R +   H
Sbjct: 121 EIALAKGRKLYDHRNELKKRAEAMDIKRELAARH 154


>UniRef50_C1ZDG5 SsrA-binding protein n=1 Tax=Planctomyces limnophilus DSM 3776
           RepID=C1ZDG5_PLALI
          Length = 160

 Score =  190 bits (483), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 58/155 (37%), Positives = 98/155 (63%), Gaps = 1/155 (0%)

Query: 2   TKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDG 61
           +K +  KP + ++  N+RARHEY + ++ + G+ L G EVKS+RAGK +I +++V ++DG
Sbjct: 5   SKPEDDKPNNISVCRNRRARHEYELMDQLDCGIVLMGSEVKSIRAGKVSIEEAWVRVQDG 64

Query: 62  EAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNA 121
           E +L G +I     AS  +  +  RTRKLL ++REL    GR +    T+V L +Y +  
Sbjct: 65  ELYLVGCDINEYPQAS-WLNHETKRTRKLLAHRRELKKFCGRTSERSITIVPLEMYLQRG 123

Query: 122 WCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMK 156
           + K+KI +AKG+K HDKR  +K ++ + +  ++ +
Sbjct: 124 FVKIKIALAKGRKLHDKREKLKAQDARREIRQVTR 158


>UniRef50_D2PSC9 SsrA-binding protein n=1 Tax=Kribbella flavida DSM 17836
           RepID=D2PSC9_9ACTO
          Length = 173

 Score =  189 bits (482), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 55/155 (35%), Positives = 88/155 (56%), Gaps = 1/155 (0%)

Query: 6   AHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFL 65
                   IA N++A H+Y + E +EAG+ LQG EVK+LRAG+A++   +  + + E +L
Sbjct: 16  KKPEADPVIARNRKAAHDYHLGESWEAGMVLQGAEVKALRAGRASLVGGFATVEEREIWL 75

Query: 66  FGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKV 125
            G +I   + A         R RKLLL++ ++D +  +VN  G T+V + LY+K+   KV
Sbjct: 76  HGVHIPQYSQAR-WFNDGSRRKRKLLLHRAQIDKIERKVNESGLTIVPVLLYFKDGRAKV 134

Query: 126 KIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           +I +A+GKK  DKR  + ERE   +  R +    +
Sbjct: 135 EIALARGKKTWDKRHALAEREATREAERAVSRRLK 169


>UniRef50_Q1IQ53 SsrA-binding protein n=1 Tax=Candidatus Koribacter versatilis
           Ellin345 RepID=SSRP_ACIBL
          Length = 175

 Score =  189 bits (482), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 57/159 (35%), Positives = 95/159 (59%), Gaps = 1/159 (0%)

Query: 2   TKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDG 61
            K+     G    ++N+ A H YF+ +++EAG+AL+G EVKS+R G+AN+ D+Y L+++ 
Sbjct: 17  AKRDPVASGERDASVNRAASHNYFLLDKYEAGVALRGTEVKSIRDGRANLKDAYGLVKEN 76

Query: 62  EAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNA 121
           E +L  A+I P   AS +    P RTRKLL+ +RE+  L     ++G+T++   +Y+KN 
Sbjct: 77  ELWLINAHIGPYDAAS-YNNHAPLRTRKLLVKKREILKLLAASQQKGHTLIPTRMYFKNG 135

Query: 122 WCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
             KV++ VAKGK+  DKR   + +    D    +  + +
Sbjct: 136 RVKVELAVAKGKQLWDKRETDRRKTADRDAREAIARSRK 174


>UniRef50_B2KCF8 SsrA-binding protein n=1 Tax=Elusimicrobium minutum Pei191
           RepID=SSRP_ELUMP
          Length = 157

 Score =  189 bits (481), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 57/160 (35%), Positives = 95/160 (59%), Gaps = 4/160 (2%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M KK     G    A N++A H Y I + +EAG+ L G EVKS+R  + ++  ++V +  
Sbjct: 1   MAKKDN---GPLVAATNRKAYHNYHILDTYEAGIELLGSEVKSIRKKEVSLDGAFVRIEG 57

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
            +A++F  +I P    +T    +P R R+LLLN++E++ L G    +G+T++ L +Y+KN
Sbjct: 58  MQAYVFNMHINPYKY-NTVTEVEPLRQRRLLLNKKEINKLKGHAEIKGHTIIPLEVYFKN 116

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
            W K+K+G+ KGK+  DKR  IK+R+   +  +  KN  +
Sbjct: 117 GWAKIKVGLGKGKQLFDKRDAIKKRDLSREMEKDFKNKIK 156


>UniRef50_Q9Z8K1 SsrA-binding protein n=2 Tax=Chlamydophila pneumoniae
           RepID=SSRP_CHLPN
          Length = 151

 Score =  188 bits (479), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 55/146 (37%), Positives = 86/146 (58%), Gaps = 1/146 (0%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           I  N++A   Y + E  EAG+ L G E+KSLR    N+ D+YV++  GE +L  A+I P 
Sbjct: 6   IVSNRKALRNYEVIETLEAGIVLTGTEIKSLRDHGGNLGDAYVIVSKGEGWLLNASIAPY 65

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGK 133
              + +   +  R RKLLL++ EL  L G++ ++G T++ L ++    + KV++G  +GK
Sbjct: 66  RFGNIY-NHEERRKRKLLLHRYELRKLEGKIAQKGMTLIPLGMFLSRGYVKVRLGCCRGK 124

Query: 134 KQHDKRSDIKEREWQVDKARIMKNAH 159
           K +DKR  I ERE + + A  MK  H
Sbjct: 125 KAYDKRRTIIEREKEREVAAAMKRRH 150


>UniRef50_Q254F5 SsrA-binding protein n=1 Tax=Chlamydophila felis Fe/C-56
           RepID=SSRP_CHLFF
          Length = 150

 Score =  188 bits (479), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 84/149 (56%), Gaps = 1/149 (0%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
            S  I  N++A   Y + +  +AG+ L G E+KSLR    N+ D+YV +  GEA+L  A+
Sbjct: 2   SSKEIVSNRKALRNYEVLDTVDAGVVLTGTEIKSLRDHGGNLGDAYVTISKGEAWLLNAS 61

Query: 70  ITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGV 129
           I P    + +   +  R RKLLL++ E+  L  +V+++G T++ L ++    + K+++G 
Sbjct: 62  IAPYRFGNIY-NHEERRKRKLLLHRYEIQKLESKVSQKGITIIPLGMFLSRGYVKIRLGC 120

Query: 130 AKGKKQHDKRSDIKEREWQVDKARIMKNA 158
            +GKK HDKR  I  RE Q +    MK  
Sbjct: 121 CRGKKAHDKRQTIIAREKQREVESAMKRY 149


>UniRef50_B2ULK9 SsrA-binding protein n=3 Tax=Verrucomicrobia RepID=B2ULK9_AKKM8
          Length = 152

 Score =  188 bits (478), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 59/150 (39%), Positives = 93/150 (62%)

Query: 11  SATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI 70
           S+ I+ NK+AR +Y I + +E G+ L+G EVKS+RAGK NI+DS+  + +G+  L+G +I
Sbjct: 2   SSDISTNKKARRDYEILDTYECGMELKGTEVKSIRAGKVNIADSFARVENGQMLLYGCDI 61

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVA 130
            P   A         R R+LLL++RE+  L  + +++G ++VAL LYWKN   K+ +G+ 
Sbjct: 62  QPWETAGEFFQHQARRPRRLLLHKREIFKLEQQTSQKGCSLVALKLYWKNGKVKLALGLG 121

Query: 131 KGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           KGK   D+R D+K R    +  R +   +R
Sbjct: 122 KGKTHRDQRYDLKARVEMREAQREVARINR 151


>UniRef50_Q2S237 SsrA-binding protein n=1 Tax=Salinibacter ruber DSM 13855
           RepID=SSRP_SALRD
          Length = 154

 Score =  188 bits (478), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 62/136 (45%), Positives = 89/136 (65%), Gaps = 2/136 (1%)

Query: 9   PGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLL-RDGEAFLFG 67
            G+  +A NK+A+ EY IEE  EAGL L+G EVKS+R GKA++  +Y  + R+GE  + G
Sbjct: 3   EGTEVVARNKKAQFEYDIEETLEAGLVLEGSEVKSVRQGKASLDGAYCQVDREGEMKIHG 62

Query: 68  ANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKI 127
             I P   A      +P R RKLLL+ +++        +EGYT+V LSLY+++ W K+KI
Sbjct: 63  MYIKPYEEAGP-FGHEPRRNRKLLLHDQQIGKWGQMAEQEGYTIVPLSLYFRDGWAKLKI 121

Query: 128 GVAKGKKQHDKRSDIK 143
           G+AKG+++HDKR  IK
Sbjct: 122 GIAKGRQKHDKRQAIK 137


>UniRef50_A5FZS6 SsrA-binding protein n=11 Tax=Alphaproteobacteria RepID=SSRP_ACICJ
          Length = 159

 Score =  187 bits (477), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 66/160 (41%), Positives = 97/160 (60%), Gaps = 3/160 (1%)

Query: 1   MTKKKAHKPGSATIA-LNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLR 59
           M + +     S  IA  N++AR  Y I++  EAG+ L+G EVKSLR G+A +S+++   R
Sbjct: 1   MAEPRKSGLISHGIAAQNRKARFNYTIKDTVEAGIVLRGAEVKSLRMGRATLSEAFAGER 60

Query: 60  DGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK 119
           DGE +LF   I            D    RKLLL ++++D L G + R+G TVV L +++ 
Sbjct: 61  DGEMYLFNMYIPEY-QGGVLSRFDTKGPRKLLLKRKQIDQLLGAIARQGSTVVPLDVHFN 119

Query: 120 -NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
                KV +G+A+G+KQHDKR  I +R+W+ DKARI+KN 
Sbjct: 120 PRGLAKVTLGIAEGRKQHDKRQAIAKRDWERDKARILKNR 159


>UniRef50_D1NAK5 SsrA-binding protein n=1 Tax=Victivallis vadensis ATCC BAA-548
           RepID=D1NAK5_9BACT
          Length = 153

 Score =  185 bits (472), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 49/153 (32%), Positives = 78/153 (50%), Gaps = 1/153 (0%)

Query: 4   KKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEA 63
                P    +A NK+A H Y I E FEAG+ L G EVKS R     +++ YV + +G+A
Sbjct: 1   MPRQTPADPVLATNKKAFHNYHIIERFEAGVELVGTEVKSCRDRAIVMNEGYVTINNGQA 60

Query: 64  FLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWC 123
           +L   +I      +       T+ R+LLL+  E+  L   + ++G T+V L  Y K    
Sbjct: 61  WLLNVHIAVYGFGN-RFNHVATQKRRLLLHHNEILKLAQWLGQKGGTIVPLKFYLKKGLV 119

Query: 124 KVKIGVAKGKKQHDKRSDIKEREWQVDKARIMK 156
           KV+I   +GK   D+R  ++ R+  ++  R +K
Sbjct: 120 KVEIAYCQGKTHGDQRETLRRRQSDLEMRRAVK 152


>UniRef50_C7JH78 Trans-translation helper factor SmpB n=8 Tax=Acetobacter
           pasteurianus RepID=C7JH78_ACEP3
          Length = 168

 Score =  185 bits (472), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 58/152 (38%), Positives = 90/152 (59%), Gaps = 2/152 (1%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
               +A N++AR  Y I E  EAGL L+G EVKSLR G+A I++++   RDG  +LF + 
Sbjct: 15  SHGMVAQNRKARFNYNILETIEAGLVLKGAEVKSLRLGRATINEAFAGERDGALWLFNSY 74

Query: 70  ITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NAWCKVKIG 128
           I            D    RKLL++++E+    G + ++G T+V L++++      KV +G
Sbjct: 75  IPEY-QGGVLSRFDTRAPRKLLMHRKEMRKFIGAIAKQGATLVPLNVHFNDRGLAKVTLG 133

Query: 129 VAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           +  GKK HDKR  I +R+WQ DKAR+++N  +
Sbjct: 134 LGVGKKSHDKRQSIADRDWQRDKARLIRNKGK 165


>UniRef50_C9LGK2 SsrA-binding protein n=8 Tax=Prevotella RepID=C9LGK2_9BACT
          Length = 159

 Score =  184 bits (469), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 57/157 (36%), Positives = 89/157 (56%), Gaps = 3/157 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M K    KP    I  NKRA H+YF+ +   AG+ L G E+KS+R GKA + D++  + +
Sbjct: 1   MAKNNKLKPARINI-KNKRAEHDYFVIDRLTAGIVLTGTEIKSIRLGKAGLVDTFCFINN 59

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-K 119
           GE ++    +   +  S +   +  R RKLLLN++E+          G T+V L LY  +
Sbjct: 60  GEMWVKNMYVAEYSFGS-YNRHELRRDRKLLLNKKEIRHWASETKSPGLTIVPLRLYIDE 118

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMK 156
           N   K+ IG+ +GKK++DKR+ IKE+E + +  R+ K
Sbjct: 119 NGRAKLDIGLCRGKKEYDKRATIKEKESRREIERVTK 155


>UniRef50_C2D8P0 TmRNA-binding protein n=2 Tax=Coriobacteriaceae RepID=C2D8P0_9ACTN
          Length = 172

 Score =  184 bits (469), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 52/159 (32%), Positives = 89/159 (55%), Gaps = 2/159 (1%)

Query: 3   KKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGE 62
           K    +     IA N+ A H+Y ++   EAG+ L G EVKSLR     ++D + ++R+ E
Sbjct: 11  KGARKQATFHLIAKNRSAYHDYDLDNAEEAGIELTGVEVKSLRERSCQLTDCFCIVRNNE 70

Query: 63  AFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NA 121
            +L G +I P +        DP R R+LL++++++ S+  RV  +G ++V L +Y+    
Sbjct: 71  LYLVGLHIHPYSHGGVW-NIDPDRRRRLLMHKKQILSIARRVQTKGVSLVPLEIYFNERN 129

Query: 122 WCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
             KVK+ V +GKK +DKR+   +R+   +  R++K   R
Sbjct: 130 RVKVKVAVGRGKKMYDKRAAAAKRDSDREIQRVLKARTR 168


>UniRef50_A9BF44 SsrA-binding protein n=3 Tax=Bacteria RepID=SSRP_PETMO
          Length = 150

 Score =  184 bits (469), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 64/146 (43%), Positives = 92/146 (63%), Gaps = 2/146 (1%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
            T+A NK+A H+Y I E FEAG++L G EVKS +AGK N  DS+  +  GE  L+  +I+
Sbjct: 2   TTLARNKKATHDYEIIETFEAGISLLGTEVKSSKAGKINFKDSFCKIEKGELILYNVHIS 61

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN-AWCKVKIGVA 130
           P + AS     DP R RKLLL+++E+  L  +V +EG T++ L +Y  N    KVKI +A
Sbjct: 62  PYSGASI-FNHDPERPRKLLLHKKEIRRLQSKVQQEGLTMIPLEIYTNNKGLIKVKIALA 120

Query: 131 KGKKQHDKRSDIKEREWQVDKARIMK 156
           KG K++DKR  I E+E++    +  K
Sbjct: 121 KGLKKYDKREKIAEKEYERRIRKQQK 146


>UniRef50_C6HYH8 SsrA-binding protein n=1 Tax=Leptospirillum ferrodiazotrophum
           RepID=C6HYH8_9BACT
          Length = 170

 Score =  184 bits (467), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 56/165 (33%), Positives = 90/165 (54%), Gaps = 6/165 (3%)

Query: 1   MTKKKAHK----PGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYV 56
           M  KK  +      +  ++ N++A   Y + E FEAG+ L G EVK++R G  N+ D++V
Sbjct: 1   MAGKKKDEREADEKARAVSTNRKALFRYEVIERFEAGIVLWGTEVKAIREGSVNLGDAFV 60

Query: 57  LLRDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSL 116
                E++L+  ++ P          DP R RKLLL+++E+  L+G   ++G TVV L +
Sbjct: 61  RFEKEESWLYQMHVGPYR-GGNRENHDPLRVRKLLLHRKEILRLFGLTLQKGLTVVPLGI 119

Query: 117 YWKNA-WCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           Y  N    KV + + KGK Q DKR  IK RE   + +R+ ++  +
Sbjct: 120 YSNNRKKFKVTLALVKGKTQGDKREAIKRREADREISRVFRSNQK 164


>UniRef50_A6DIW5 SsrA-binding protein n=2 Tax=Bacteria RepID=A6DIW5_9BACT
          Length = 147

 Score =  183 bits (466), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 55/145 (37%), Positives = 88/145 (60%), Gaps = 2/145 (1%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           IA N++AR  Y I E++EAG+ LQG EVKS R    +I++++V    GEA++  ++I+P 
Sbjct: 3   IATNRKARFNYEIIEKYEAGVELQGTEVKSCRNKSISIAEAFVAFESGEAWMRESHISPY 62

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGK 133
              +     +P R R+LLL++RE+  L   V ++G +V+ LS++ K    K+ IG+ +GK
Sbjct: 63  EQGN-RNNHEPKRKRRLLLHKREIRKLMREVEQKGLSVIPLSVHLKRGKIKISIGLCRGK 121

Query: 134 KQHDKRSDIKEREWQVDKARIMKNA 158
              DKR  IK+R+      R +KN 
Sbjct: 122 NTVDKRDSIKKRDNDRALQR-LKNK 145


>UniRef50_Q6MAG8 SsrA-binding protein n=4 Tax=Chlamydiales RepID=SSRP_PARUW
          Length = 153

 Score =  183 bits (465), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 56/142 (39%), Positives = 84/142 (59%), Gaps = 1/142 (0%)

Query: 8   KPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFG 67
           K   + +  N+RA H+Y I E FE G+ LQG E+KS+R   A + D+YV +   E +L G
Sbjct: 2   KDKHSDLVSNRRATHDYEILETFETGIVLQGTEIKSIRDHGATLQDAYVKVIHNELWLIG 61

Query: 68  ANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKI 127
            NI      + H   +  R RKLL+++RE+    G +  +G  ++ L+LY K    KV+I
Sbjct: 62  CNIAHYRFGNIH-NHEEKRDRKLLMHKREIKKCKGAIQEKGLALIPLALYLKQGRIKVRI 120

Query: 128 GVAKGKKQHDKRSDIKEREWQV 149
            +AKGKK  DKR+D+KER+ + 
Sbjct: 121 AIAKGKKSFDKRADLKERDDKR 142


>UniRef50_A0FD64 TmRNA-binding protein n=1 Tax=Coxiella endosymbiont of Amblyomma
           americanum RepID=A0FD64_9COXI
          Length = 154

 Score =  182 bits (464), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 62/149 (41%), Positives = 92/149 (61%)

Query: 7   HKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLF 66
            +     I LNK+  H+Y+IE+  EAGL L+ WE+KS+RAG   + +SYV+ +  EA+L 
Sbjct: 2   KQSALRIIVLNKKTFHDYYIEQRLEAGLVLESWEIKSIRAGHIQLRNSYVIFKSREAWLI 61

Query: 67  GANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVK 126
           G + +P +  + HV  DP R+RKLLLN+ E+D L   V ++  TVV L L+W     K +
Sbjct: 62  GVHCSPPSNIAYHVKPDPKRSRKLLLNKHEIDRLLSTVQKKRLTVVPLDLHWYKNHVKTE 121

Query: 127 IGVAKGKKQHDKRSDIKEREWQVDKARIM 155
           + + +GK+ HDKR  IK REW+  K   +
Sbjct: 122 VALVRGKRMHDKRETIKRREWERKKHETL 150


>UniRef50_B3DV24 TmRNA-binding protein n=1 Tax=Methylacidiphilum infernorum V4
           RepID=B3DV24_METI4
          Length = 152

 Score =  182 bits (464), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 60/148 (40%), Positives = 98/148 (66%)

Query: 11  SATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI 70
              + +N+RAR +Y I +  EAG+ L G EVKSL+AGK ++  ++  + +GEAFL+  NI
Sbjct: 2   ERDLVVNRRARKDYQILKTLEAGIVLLGSEVKSLKAGKGSLEGAFARVENGEAFLYQMNI 61

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVA 130
           +P   A+++ + DP   RKLLL+++E+  L G ++R+G T+V L LY++    KV +G+A
Sbjct: 62  SPYEKAASYALRDPKAPRKLLLHKKEIGELAGAISRQGRTIVPLKLYFRRGKIKVLLGIA 121

Query: 131 KGKKQHDKRSDIKEREWQVDKARIMKNA 158
            G+ + DKR  IKE+E Q + +R++K  
Sbjct: 122 SGRSKVDKREKIKEQETQREISRVLKRR 149


>UniRef50_B9XT05 SsrA-binding protein n=1 Tax=bacterium Ellin514 RepID=B9XT05_9BACT
          Length = 151

 Score =  182 bits (464), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 58/143 (40%), Positives = 84/143 (58%), Gaps = 1/143 (0%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
           A I  N +AR +Y I E FEAG+AL+G EVKSLRAG   I+D++  + + + FL+  +I 
Sbjct: 2   ADILSNHKARRDYHILETFEAGIALKGTEVKSLRAGLGQIADAFARVENDQVFLYNVHID 61

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
                +     +P   RKLLL++ E+  L+G  + +G  +  LS YWKN   KV + V K
Sbjct: 62  EYRFGNRQ-NHEPKSARKLLLHKSEIRKLFGLASVKGNALFPLSFYWKNGKVKVALAVGK 120

Query: 132 GKKQHDKRSDIKEREWQVDKARI 154
           GK + DKR DIK+R+   +  R 
Sbjct: 121 GKVEFDKRDDIKKRDADRELKRA 143


>UniRef50_A6L927 SsrA-binding protein n=17 Tax=Bacteria RepID=SSRP_PARD8
          Length = 153

 Score =  182 bits (462), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 51/152 (33%), Positives = 83/152 (54%), Gaps = 2/152 (1%)

Query: 6   AHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFL 65
             K  +     NKRA  +Y + + F AG+ L G E+KS+R GKA++ D++ ++  GE ++
Sbjct: 2   KEKISNNIQIKNKRATFDYELLDTFTAGIVLTGTEIKSIRLGKASLVDTFCIVEKGELWV 61

Query: 66  FGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NAWCK 124
               I       T+   +  R RKLLL ++EL  + G V   G+T+V   L+       K
Sbjct: 62  KNMYIAEY-FYGTYNNHNARRDRKLLLTKKELRKIEGAVRASGFTIVPTRLFINEKGLAK 120

Query: 125 VKIGVAKGKKQHDKRSDIKEREWQVDKARIMK 156
           V + +A+GKK++DKR  I+ER+ + +  R  K
Sbjct: 121 VVVAIARGKKEYDKRDSIRERDDRREMDRAFK 152


>UniRef50_Q83N13 SsrA-binding protein n=2 Tax=Tropheryma whipplei RepID=SSRP_TROWT
          Length = 211

 Score =  181 bits (461), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 56/157 (35%), Positives = 86/157 (54%), Gaps = 1/157 (0%)

Query: 4   KKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEA 63
            +  K     IA NK A + YF+++ FEAGL L G EVKS+R  K ++S++Y+   + E 
Sbjct: 17  PERSKIPDCVIASNKSAEYNYFLDKTFEAGLVLLGSEVKSVRQQKISLSEAYIYEDNSEI 76

Query: 64  FLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWC 123
           +L    I            +P R RKLLL++ ++  L   +   G T+V +  Y++N   
Sbjct: 77  WLANLYIPEHKTGG-WTNHNPRRLRKLLLHKYQIARLRKDLLIPGITLVPIKFYFRNGRA 135

Query: 124 KVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           K+ I +A+GKK  DKR  IKERE  ++  R +K+  R
Sbjct: 136 KLLIALARGKKLIDKREVIKEREATLEANRALKHRLR 172


>UniRef50_B2GAM5 SsrA-binding protein n=4 Tax=Bacteria RepID=SSRP_LACF3
          Length = 157

 Score =  181 bits (461), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 64/158 (40%), Positives = 94/158 (59%), Gaps = 1/158 (0%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M KK      +  IA NK+ARH+Y + + FEAGL L G E+KS+RA +  + D Y    +
Sbjct: 1   MAKKNHQGLDANLIAQNKKARHDYTVTDTFEAGLVLTGTEIKSVRARRVTLKDGYAQFHN 60

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GE +L   +I   A        DP R RKLLL+++EL  L G +  +G T+V L +Y K+
Sbjct: 61  GELWLMNVHIAEFA-GGNIFNHDPLRNRKLLLHKKELKKLQGELTAKGVTLVPLKMYLKH 119

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
            + KV +G+A+GK ++DKR+ IK+RE      R+MK+ 
Sbjct: 120 GYAKVLLGLAQGKHEYDKRNAIKKREQDRQIDRVMKHY 157


>UniRef50_Q04TV5 SsrA-binding protein n=6 Tax=Leptospira RepID=SSRP_LEPBJ
          Length = 160

 Score =  181 bits (461), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 60/158 (37%), Positives = 98/158 (62%), Gaps = 3/158 (1%)

Query: 4   KKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEA 63
            K  +PG + +  NK+A+  + +    EAG+ L G EVKSLR  K N++D++  +++GE 
Sbjct: 3   NKKEEPGHSPLV-NKKAKFNFELVSFIEAGIVLSGSEVKSLREKKGNLTDAFAKIKNGEV 61

Query: 64  FLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNA-W 122
           FL   +ITP      +V     R RKLLL+++E++ L  +V  +G  +VA  +Y+KN   
Sbjct: 62  FLENFSITPYKNGG-YVNHPEIRPRKLLLHKKEIEKLERQVKEKGLVLVATKVYFKNNLR 120

Query: 123 CKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
            KV+I V K KK HDKR D+++++ Q + AR +K+++R
Sbjct: 121 VKVEIAVGKPKKIHDKRDDMQKKDAQQEIARALKSSNR 158


>UniRef50_D1VZH7 SsrA-binding protein n=1 Tax=Prevotella timonensis CRIS 5C-B1
           RepID=D1VZH7_9BACT
          Length = 160

 Score =  180 bits (459), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 58/160 (36%), Positives = 92/160 (57%), Gaps = 3/160 (1%)

Query: 1   MTK-KKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLR 59
           M K ++A +  S     NKRA  EYF  + + AG+ L G E+KS+R GKA++ D++  + 
Sbjct: 2   MNKDEQALRKKSPIQIKNKRASFEYFFIDTYTAGIVLTGTEIKSIRLGKASLVDAFCYIN 61

Query: 60  DGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW- 118
           +GE ++ G NI+P     +    +  R RKLLL +RE+  L       G T++ + L+  
Sbjct: 62  NGEIWVKGMNISPY-FYGSFSNHEARRDRKLLLTKREIRRLEIDAKNPGNTILPVLLFID 120

Query: 119 KNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
           +    KV I +AKGKK++DKR  +KE+E Q +  R +K+ 
Sbjct: 121 QKGRAKVDIVLAKGKKEYDKRQSLKEKEDQREMDRALKHY 160


>UniRef50_C0JZT0 SsrA-binding protein n=1 Tax=uncultured bacterium URE12
           RepID=C0JZT0_9BACT
          Length = 163

 Score =  180 bits (459), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 65/160 (40%), Positives = 92/160 (57%), Gaps = 2/160 (1%)

Query: 2   TKKKAHK-PGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
            KK   K      IA N++ARH+Y IE+  EAGLAL+G EVKSLR     I+ ++  +  
Sbjct: 4   AKKSDEKDKNFEQIATNRKARHDYLIEDTIEAGLALEGPEVKSLRLKHCVITSAFARVEP 63

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
              +L+G  I+P A  +T    DP RTRKLLL + E+  L   V  +G  +VAL +Y+K 
Sbjct: 64  RGVYLYGMQISPYAF-NTLTQLDPVRTRKLLLKKTEIRRLSRAVEIKGMALVALEVYFKR 122

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
            W KV IG+ +GKK  DK+  IK+R+   +  R  K  ++
Sbjct: 123 GWAKVLIGLGRGKKAADKKETIKKRDIDREMRRDFKEKYK 162


>UniRef50_Q6MQ46 SsrA-binding protein n=1 Tax=Bdellovibrio bacteriovorus
           RepID=SSRP_BDEBA
          Length = 152

 Score =  180 bits (458), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 58/150 (38%), Positives = 87/150 (58%), Gaps = 1/150 (0%)

Query: 9   PGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGA 68
                +  NK+AR +Y I E +EAGL L G EVKSLR     + DSY+  +  EA+L  A
Sbjct: 3   ENILIVHENKKARFDYTIVETYEAGLQLMGSEVKSLRNKDVQLKDSYISFKGDEAYLQNA 62

Query: 69  NITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIG 128
           +I     AS++    P R RKLL+++ ELD ++  +  +GY+ V L +Y+KN   K++I 
Sbjct: 63  HIAEYK-ASSYNNHVPERHRKLLMHRNELDEIFEALREKGYSCVPLKIYFKNGRAKLQIA 121

Query: 129 VAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
           + KGKK HDKR  IK+R+        ++ +
Sbjct: 122 LVKGKKTHDKREAIKKRDVSDQIRSSLRRS 151


>UniRef50_C9RKN3 SsrA-binding protein n=1 Tax=Fibrobacter succinogenes subsp.
           succinogenes S85 RepID=C9RKN3_FIBSS
          Length = 156

 Score =  179 bits (456), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 57/156 (36%), Positives = 90/156 (57%), Gaps = 4/156 (2%)

Query: 7   HKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLR--DGEAF 64
            K  S  +  N++A H YF++E FE G+ L G EVKS+R GK  + ++++ +     E +
Sbjct: 3   KKESSTPVIQNRKANHLYFVDETFEVGIMLIGSEVKSIRNGKCTLGEAWIDIDENKDELW 62

Query: 65  LFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCK 124
           L GA+I     A+      P R RKLL +  E+  +      +G T++ L +Y+KN   K
Sbjct: 63  LVGAHIDEYLFAN-RFNHFPARRRKLLAHTHEIQKMRKAKELKGCTIIPLKMYFKNRIAK 121

Query: 125 VKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           +++G+ +GK QHDKR DI  R+ +++ AR  K AHR
Sbjct: 122 LEVGICRGKDQHDKRQDILVRDAKMEMARAAK-AHR 156


>UniRef50_Q02A69 SsrA-binding protein n=1 Tax=Candidatus Solibacter usitatus
           Ellin6076 RepID=SSRP_SOLUE
          Length = 156

 Score =  179 bits (455), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 54/158 (34%), Positives = 82/158 (51%), Gaps = 3/158 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M  KK        ++ N++A H YF+ E FE G+ L G EVK+ +  K  + D+Y  +  
Sbjct: 1   MADKKDF--AFKILSDNRQAGHNYFLSERFECGMVLTGTEVKAAKDAKIQLKDAYASVLG 58

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
            EA+L  A+I+  +  +      P R RKLLL++RE+D L      +G  ++   +Y KN
Sbjct: 59  DEAWLLNAHISQYSHGNRE-NHLPVRNRKLLLHRREIDKLQEITREKGLALIPTKIYMKN 117

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
              K +I VAKGKK +DKR+  K R    +    M+  
Sbjct: 118 GKIKCEIAVAKGKKLYDKRAADKARTADDEARAEMRRR 155


>UniRef50_B8D947 SsrA-binding protein n=4 Tax=Buchnera aphidicola RepID=SSRP_BUCA5
          Length = 162

 Score =  179 bits (454), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 73/157 (46%), Positives = 113/157 (71%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M +KK ++  S+ I +NK+A + YFIE+ F++GL L+GWE+KS+R+GK NIS+SY++   
Sbjct: 1   MLQKKKYQKKSSKIIINKKAYYNYFIEKVFQSGLVLEGWEIKSIRSGKVNISESYIINDR 60

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
            E +L    I P+ ++S    CDPTR +KLLL++ E+D L  +    GYT+V+LSL+WK 
Sbjct: 61  NEMYLCNCLIEPLQMSSNRFSCDPTRKKKLLLHKNEIDFLSLKKKNTGYTMVSLSLFWKK 120

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKN 157
           +WCK++ G+AKGK   DKR ++K+REW+ +K +I+K 
Sbjct: 121 SWCKLEFGLAKGKTAQDKRINLKKREWEQEKLKILKK 157


>UniRef50_A8EWH6 SsrA-binding protein n=48 Tax=Epsilonproteobacteria
           RepID=SSRP_ARCB4
          Length = 158

 Score =  177 bits (451), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 59/159 (37%), Positives = 99/159 (62%), Gaps = 3/159 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M  KK  K     +  NK+A H++ I E  EAG+ L+G EVK++R G+ N+ DS+V +  
Sbjct: 1   MANKKDTKKN--LVFKNKKAFHDFTILETLEAGIVLEGSEVKAIREGRVNLKDSFVRIIK 58

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK- 119
           GE FL  A+I+ ++   +    D  R+RKLLL+ +++D +Y +V ++G T+VAL LY+  
Sbjct: 59  GEVFLLNAHISHLSTTHSTYRPDERRSRKLLLHSKQIDKMYSKVTKDGITLVALKLYFND 118

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
               K+++  A+GKK HDKR D+K +  + +  +++K+ 
Sbjct: 119 KNMIKIEVATAQGKKLHDKREDLKAKTMKRETEQVLKSF 157


>UniRef50_C5JAN1 SsrA-binding protein n=1 Tax=uncultured bacterium
           RepID=C5JAN1_9BACT
          Length = 153

 Score =  177 bits (451), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 61/152 (40%), Positives = 95/152 (62%), Gaps = 4/152 (2%)

Query: 11  SATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYV--LLRDGEAFLFGA 68
              IALNK A+ +Y + E  EAG+ L G+EVKS R G  +I +S+V  +   GE +LF A
Sbjct: 3   HKVIALNKLAKFDYSLLEVIEAGIVLTGFEVKSARLGGISIRESHVGEMQGSGELYLFNA 62

Query: 69  NITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NAWCKVKI 127
           N      A+T +  +P R RKLLL +R+++ L G+V+R+G+T++ + +Y+      K++I
Sbjct: 63  NFPEYIHATT-MKQEPKRPRKLLLGRRQINKLLGQVHRKGFTIIPVQMYFNEKGIIKIEI 121

Query: 128 GVAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
            +A+GK   DKR  IK REW  +K R++K + 
Sbjct: 122 ALAQGKNVVDKRETIKLREWDREKHRVLKASS 153


>UniRef50_Q2ST23 SsrA-binding protein n=4 Tax=Mollicutes RepID=SSRP_MYCCT
          Length = 148

 Score =  177 bits (450), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 52/147 (35%), Positives = 90/147 (61%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
               I  NK+A   Y I + ++AG+ L G E+KS+R    +I++++VL+R  E ++   N
Sbjct: 2   SEHLIVKNKKAYFNYEIIQTYQAGIVLNGPEIKSIRNHDVSINEAFVLIRKKEIYILNMN 61

Query: 70  ITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGV 129
           +     A+     + TRTRKLLL+++E+  +  ++ +E  T++ + LY+KN + K++I +
Sbjct: 62  VKKYQFANYIKGLEETRTRKLLLHKKEIIKILNKIKQENLTIIPIKLYFKNDYVKLEIAL 121

Query: 130 AKGKKQHDKRSDIKEREWQVDKARIMK 156
           AKGKK HDKR  IK+R+ +  + R  K
Sbjct: 122 AKGKKLHDKRQTIKKRDTERKELRDYK 148


>UniRef50_Q3ARF1 SsrA-binding protein n=11 Tax=Chlorobiaceae RepID=SSRP_CHLCH
          Length = 157

 Score =  177 bits (449), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 55/160 (34%), Positives = 96/160 (60%), Gaps = 4/160 (2%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M+K+   +   A +  N++ARHE+ I E F AG+ L G EVKS+R G+A++++S+ ++  
Sbjct: 1   MSKQPQQRYAEAIV--NRKARHEFEIIETFVAGIQLAGSEVKSVRLGQASLNESFAIILR 58

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK- 119
            E +L    ITP       V+ +  R+RKLLL+++E+  L  +V+ +G T+V L  ++  
Sbjct: 59  NEVWLENMQITPYKHNRMEVL-EAKRSRKLLLHKKEIAKLQAKVSEKGLTLVPLKAFFTP 117

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
           +   K+++ +A+GKK +DKR  +K RE Q    ++ K   
Sbjct: 118 HGLLKIELAIARGKKLYDKRETLKNRENQRHLDQLRKQYS 157


>UniRef50_B1AI43 SsrA-binding protein n=16 Tax=Mycoplasmataceae RepID=SSRP_UREP2
          Length = 141

 Score =  177 bits (449), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 49/138 (35%), Positives = 78/138 (56%), Gaps = 1/138 (0%)

Query: 13  TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
            I  NK AR  Y + + FE G+ L+G EVKS+     +I+++YV +   +A +   ++  
Sbjct: 1   MIVSNKHARRNYELLDFFECGIVLKGTEVKSISRANCSINEAYVQIIKNQALILNMHVAN 60

Query: 73  MAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKG 132
               +     DP R RKLLL+++E+  L   V  +  T+V   +YWKN   K++I + KG
Sbjct: 61  FFEGNN-FNQDPYRNRKLLLHKKEIIRLQHLVKTQHMTIVPTKIYWKNNKLKIEIALGKG 119

Query: 133 KKQHDKRSDIKEREWQVD 150
           K+ HDKR DIK+R+   +
Sbjct: 120 KQLHDKREDIKKRDLARE 137


>UniRef50_B7KVC8 SsrA-binding protein n=25 Tax=cellular organisms RepID=SSRP_METC4
          Length = 157

 Score =  176 bits (448), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 68/159 (42%), Positives = 96/159 (60%), Gaps = 4/159 (2%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M  K    PG   +A N+ AR+ Y IE+  EAG+AL G EVKSLR GKA I +SY     
Sbjct: 1   MAPKPD--PGRRVVADNRSARYHYAIEDTLEAGIALTGTEVKSLRGGKATIGESYAGPSG 58

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK- 119
            +  LF A I     A+     D  R R+LLL++R+++ L G   R+GYTV+ L +Y+  
Sbjct: 59  NDLMLFNAYIPEYLEAN-RFNHDTKRPRRLLLHRRQINKLIGATQRQGYTVIPLKIYFND 117

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
               KV++G+ KGK+ HDKR  +K+R+W  DKAR+M++ 
Sbjct: 118 KGRAKVELGLGKGKQLHDKRESVKQRDWDRDKARLMRDK 156


>UniRef50_A0M3P0 SsrA-binding protein n=13 Tax=Bacteroidetes RepID=SSRP_GRAFK
          Length = 157

 Score =  174 bits (443), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 53/145 (36%), Positives = 82/145 (56%), Gaps = 2/145 (1%)

Query: 15  ALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMA 74
             N++A+  Y   +++ AG+ L G E+K++R GKANI++S+    + E F+   ++   +
Sbjct: 13  IKNRKAKFNYEFLDKYTAGIKLAGTEIKAIREGKANIAESFCEFNNHELFVINMHVEEYS 72

Query: 75  VASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NAWCKVKIGVAKGK 133
            A TH   +P   RKLLL +REL  L   V   G T++ L L+       K++I +AKGK
Sbjct: 73  HA-THFNHNPRSQRKLLLQRRELRKLEKEVTNSGLTIIPLRLFINDRGLAKLQISLAKGK 131

Query: 134 KQHDKRSDIKEREWQVDKARIMKNA 158
           K +DKR  IK+RE +    RI K  
Sbjct: 132 KLYDKRETIKDRESKRRLDRIQKEY 156


>UniRef50_B7GAQ2 Predicted protein (Fragment) n=3 Tax=Bacillariophyta
           RepID=B7GAQ2_PHATR
          Length = 160

 Score =  172 bits (438), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 52/158 (32%), Positives = 85/158 (53%), Gaps = 3/158 (1%)

Query: 4   KKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDG-- 61
           KK +K   +TI++N+ A   Y I +  EAG++L G EVKS+R GK N+ D Y+       
Sbjct: 1   KKKNKTRDSTISVNRVAYRNYEIVDTIEAGISLVGTEVKSIRNGKLNLRDGYIRPTKDGR 60

Query: 62  EAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-N 120
              L+  +I   + A      + TR R LL+++ E      +  ++G T+V L  Y+   
Sbjct: 61  SCILYNVHIGKHSQAGAFFQHEETRPRALLVHKAEARKFLQQTEQQGMTIVPLKAYYNDK 120

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
              K++I + +GK   DKR  IKER+ + ++ RI+K+ 
Sbjct: 121 NRVKLQIALCRGKNVRDKRVTIKERDAKREERRIIKSF 158


>UniRef50_B3EUI8 SsrA-binding protein n=4 Tax=Bacteroidetes RepID=B3EUI8_AMOA5
          Length = 156

 Score =  172 bits (436), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 53/154 (34%), Positives = 85/154 (55%), Gaps = 5/154 (3%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M  KK    G   +  NK+A  EY   ++F AG+ L G E+KS+R  K ++ ++Y   + 
Sbjct: 1   MNVKKNKTTG--LVIRNKQASFEYTFIDKFIAGIVLTGTEIKSIRKAKVSLQEAYCYFKS 58

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-K 119
           GE ++   +I      + +      R RKLLL ++EL+ L  +   +G T++ + L+  +
Sbjct: 59  GELWIKSMHIAQYEQGNIY-NHVENRERKLLLTRKELNKLI-KNQEKGLTIIPIQLFIDE 116

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKAR 153
           N   K++I +AKGKK +DKR  IKER+ Q D  R
Sbjct: 117 NNRAKLQIALAKGKKLYDKRQHIKERDVQRDMER 150


>UniRef50_Q11TP3 SsrA-binding protein n=36 Tax=Bacteroidetes RepID=SSRP_CYTH3
          Length = 153

 Score =  169 bits (429), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 53/141 (37%), Positives = 83/141 (58%), Gaps = 2/141 (1%)

Query: 15  ALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMA 74
             NK+A  EY   E++EAG+ L+G E+K++R  KA+IS++Y L  + E ++   NI+   
Sbjct: 12  IKNKKASFEYEFLEKYEAGIVLKGTEIKAIRMSKASISEAYCLFDNEELWIKNMNISSYD 71

Query: 75  VASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NAWCKVKIGVAKGK 133
             S     DP   RKLLL + EL  L+     +G T++AL L+     + K++I +AKGK
Sbjct: 72  KGS-FYNHDPLSARKLLLRKAELKKLFMHSKEKGLTIIALRLFTNERGYAKIEIALAKGK 130

Query: 134 KQHDKRSDIKEREWQVDKARI 154
           K +DKR  IK ++ + +  RI
Sbjct: 131 KLYDKRESIKSKDNEREMQRI 151


>UniRef50_B1GZD8 SsrA-binding protein SmpB n=1 Tax=uncultured Termite group 1
           bacterium phylotype Rs-D17 RepID=B1GZD8_UNCTG
          Length = 153

 Score =  167 bits (423), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 51/145 (35%), Positives = 83/145 (57%), Gaps = 2/145 (1%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
            T++ N++A + Y I E+ E G+ L G+EVKS R    ++ DS V   D EAF     I 
Sbjct: 8   KTLSSNRKAYYNYEILEKLETGIVLSGYEVKSARQSNISLVDSVVRFSDCEAFAENMFIA 67

Query: 72  PMAVASTHVV-CDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-KNAWCKVKIGV 129
                STH+   D  R RKLL+++ E++ +  +V  +G TV+ L +Y       K+ IG+
Sbjct: 68  SYEQISTHIADYDAKRKRKLLMHKSEINKMRTKVKEKGLTVIPLEVYIGNRGKIKLLIGL 127

Query: 130 AKGKKQHDKRSDIKEREWQVDKARI 154
           AKGKK ++K+  +K+++ + + AR 
Sbjct: 128 AKGKKTYNKKEALKKKDIEREVARE 152


>UniRef50_Q6Q8U8 Predicted SsrA n=1 Tax=uncultured marine gamma proteobacterium
           EBAC20E09 RepID=Q6Q8U8_9GAMM
          Length = 156

 Score =  166 bits (421), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 60/154 (38%), Positives = 93/154 (60%), Gaps = 1/154 (0%)

Query: 7   HKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLF 66
            K  +  I  NK A   + + E F+AG+ L+GWEVKSLR  K ++ +SYV +R GEA+L 
Sbjct: 2   SKEKTVLIVKNKNASRNFKLNESFQAGIVLEGWEVKSLRDSKVDVKNSYVNIRKGEAWLI 61

Query: 67  GANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVK 126
           G  I  +  +      D T++RKLLL+++E+  +      +G T V   +YWK+   K  
Sbjct: 62  GVKID-IPASLQQENIDTTKSRKLLLHKKEIAKIERLKGEKGLTCVLTRIYWKDNLIKCD 120

Query: 127 IGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           I + +GKK  D+R DIK+R+W+ D+ RI+KN+ +
Sbjct: 121 IAMGQGKKHRDQREDIKKRDWERDQGRILKNSKK 154


>UniRef50_UPI00016992A0 SsrA-binding protein n=1 Tax=Endoriftia persephone
           'Hot96_1+Hot96_2' RepID=UPI00016992A0
          Length = 148

 Score =  165 bits (420), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 61/107 (57%), Positives = 89/107 (83%)

Query: 13  TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
           TIALNK+A+H+YFIEE +EAG+AL+GWEVKSLRAG+ N++++YV++  GEA+LFGANI+P
Sbjct: 16  TIALNKKAKHDYFIEERYEAGVALEGWEVKSLRAGRINLTEAYVIINKGEAYLFGANISP 75

Query: 73  MAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK 119
           +   S+H+  +PTR RKLLL++ EL+ L G V R+G+T+V  ++Y +
Sbjct: 76  LPTVSSHIQPNPTRNRKLLLHRTELNKLIGLVERKGFTLVPTAMYLE 122


>UniRef50_Q89AM9 SsrA-binding protein n=1 Tax=Buchnera aphidicola (Baizongia
           pistaciae) RepID=SSRP_BUCBP
          Length = 158

 Score =  165 bits (420), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 63/156 (40%), Positives = 102/156 (65%), Gaps = 2/156 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M +    KP    I +N++A++ + I+E FEAG+ L GWEVKS+R GK NIS+SY+ L++
Sbjct: 1   MKRNSNRKPNE--ICINRKAKYSFSIKETFEAGIVLLGWEVKSVRCGKINISNSYISLKN 58

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GE +L  +   P++ ++ ++  +  R +K+LL +RE+  LY ++ +   T++ LS+++K 
Sbjct: 59  GEMYLVNSQFDPISKSNLYITYECNRIKKILLRKREITYLYSKLYKSHLTIIVLSIFFKK 118

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMK 156
            WCKVKIG+AKGK   DKR   K  EW+  + R +K
Sbjct: 119 QWCKVKIGIAKGKTIKDKREHKKLSEWKKTQNRFVK 154


>UniRef50_P75043 SsrA-binding protein n=2 Tax=Mycoplasma RepID=SSRP_MYCPN
          Length = 147

 Score =  164 bits (417), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 46/141 (32%), Positives = 82/141 (58%), Gaps = 1/141 (0%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             +  N RA+++Y++   + AGL L+G EVKSL  G+ ++ ++YV +   E ++   +I+
Sbjct: 2   RVLVNNPRAQYDYYLLTGYCAGLVLKGSEVKSLALGQGSLKEAYVFIDKHEVYIKDFSIS 61

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
           P A +         R +KLLLN+ E+  +  R  +EG +++ L +++KN   K++I +AK
Sbjct: 62  PYAFSGE-FNHPFKRVKKLLLNRNEIKQITARQKQEGLSIIPLKVFFKNGKIKMEIWLAK 120

Query: 132 GKKQHDKRSDIKEREWQVDKA 152
            KK+ DKR  IK +  Q +  
Sbjct: 121 PKKKFDKREAIKSKTIQRELR 141


>UniRef50_B1VAG4 SsrA-binding protein n=2 Tax=Candidatus Phytoplasma
           RepID=B1VAG4_PHYAS
          Length = 176

 Score =  164 bits (416), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 96/149 (64%), Gaps = 2/149 (1%)

Query: 12  ATIALNKRARHEYFIEEE-FEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI 70
            TIA NK+A  ++F+E++ + AG+ L G EVKS+R GK ++++SY  +++ E F+   +I
Sbjct: 28  KTIATNKKAVFDFFLEKKKYHAGIKLLGNEVKSIRLGKISLNNSYAYIKNNEIFIVNLSI 87

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVA 130
                 S  +  D  RT+KLLL ++E+  +  ++  +G++V+ L +Y++    KV+I +A
Sbjct: 88  LKYPF-SCCMQYDENRTKKLLLRKQEIIQIQNKIKTQGFSVIPLKVYFEKNLVKVEIVLA 146

Query: 131 KGKKQHDKRSDIKEREWQVDKARIMKNAH 159
           KGKK++DKR+ +KE+  Q+   + +K  +
Sbjct: 147 KGKKKYDKRNSLKEKAAQLSIQKNLKKIN 175


>UniRef50_C6X237 TmRNA-binding protein SmpB n=2 Tax=Flavobacteriales
           RepID=C6X237_FLAB3
          Length = 155

 Score =  164 bits (416), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 60/159 (37%), Positives = 86/159 (54%), Gaps = 5/159 (3%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M K K  K       LN+RAR EY + EE EAG+ L G E+KSLR+ KA+I+D++    D
Sbjct: 1   MFKMKIEKS---VTILNRRARFEYELLEEIEAGMVLTGTEIKSLRSSKASITDAFCQFID 57

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK- 119
           GE ++    I    +  T       R RKLLL++ EL     ++   G T++ L +Y   
Sbjct: 58  GELYIINMMIDEYKL-GTFYNHKTKRERKLLLHKTELKKFEKKLKDVGNTIIPLKMYINA 116

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
               K+ I V +GKK  DKR  IK+RE + +  RI+K +
Sbjct: 117 KGKAKILIAVGRGKKLFDKRESIKDRENKRNIDRILKKS 155


>UniRef50_Q1LSR7 SsrA-binding protein n=17 Tax=Gammaproteobacteria RepID=SSRP_BAUCH
          Length = 161

 Score =  162 bits (411), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 93/149 (62%), Positives = 123/149 (82%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
            TI  NKR R+EYFIE+EFEAG++L GWEVKSLRAG  +I+DSY+LL+D EAFL GA + 
Sbjct: 13  TTITQNKRVRYEYFIEQEFEAGISLLGWEVKSLRAGIVHINDSYILLKDSEAFLLGATLR 72

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
           P+ VAS+H++  P R+RKLLL +RELD+L G+V+R+GYT+V +SLYW+N+  K+++G+AK
Sbjct: 73  PLIVASSHILYSPMRSRKLLLRRRELDTLLGKVHRKGYTIVPISLYWRNSLAKIQLGIAK 132

Query: 132 GKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           GKKQ+DKR  IKEREW ++KARI K  HR
Sbjct: 133 GKKQYDKRHCIKEREWLLNKARITKLVHR 161


>UniRef50_Q0SPD1 SsrA-binding protein n=20 Tax=Borrelia RepID=SSRP_BORAP
          Length = 150

 Score =  159 bits (403), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 50/146 (34%), Positives = 89/146 (60%), Gaps = 1/146 (0%)

Query: 11  SATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI 70
           +  +  NK+A+  YFIEE+   G+ L+G EVKS++A K + ++S+ +++  E +L   ++
Sbjct: 4   NTLLIENKKAKFNYFIEEKISCGIVLKGTEVKSIKAKKLSFNNSFAIIKKEELWLENLHV 63

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVA 130
           +     +     D  R RKLL+ ++EL  L     +EGYT++ +S Y K +  KV++G+ 
Sbjct: 64  SKYKEGNI-FNHDELRPRKLLIKKKELQRLKKFKEKEGYTLIPISFYLKKSIIKVEVGIC 122

Query: 131 KGKKQHDKRSDIKEREWQVDKARIMK 156
           KGKK +DKR  +K++  + D +R +K
Sbjct: 123 KGKKLYDKREILKQKSIKKDLSREIK 148


>UniRef50_Q7VRQ2 TmRNA-binding protein n=2 Tax=Candidatus Blochmannia
           RepID=Q7VRQ2_BLOFL
          Length = 148

 Score =  157 bits (399), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 67/147 (45%), Positives = 98/147 (66%), Gaps = 1/147 (0%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           I  NKR  H+YFIE+E E GL L GWEVKS+R+ K  I +SYV LRD EA++  AN   +
Sbjct: 3   IIQNKRVHHKYFIEKEIETGLVLLGWEVKSIRSRKITIENSYVSLRDQEAYMCNANFQ-I 61

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGK 133
                    DPTR RKLLL ++EL  L   ++++ YT++ L+L+WKN+W K  IG+AKGK
Sbjct: 62  QTNMNVSTPDPTRMRKLLLKKQELSFLTEIMHKKSYTIIILNLFWKNSWIKANIGIAKGK 121

Query: 134 KQHDKRSDIKEREWQVDKARIMKNAHR 160
           K++DKR  +   +W++++  I+K  ++
Sbjct: 122 KKYDKRHIVNTHQWKLEQKHIIKCVNK 148


>UniRef50_A5KSW6 SsrA-binding protein n=2 Tax=candidate division TM7
           RepID=A5KSW6_9BACT
          Length = 154

 Score =  157 bits (397), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 6/156 (3%)

Query: 3   KKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGE 62
           KKK    G+    LN+RA+ +Y + +E   GL L G EV++ R G   +  +YV +R+ E
Sbjct: 2   KKKTTTSGA---VLNRRAKFDYELGDELAVGLVLNGPEVRAARDGHVQLKGAYVTIRNDE 58

Query: 63  AFLFGANIT--PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
            +L  A+ +  P            T+ RKLL +++++ +L  +  + G T+V L L+   
Sbjct: 59  LWLNNASFSVKPAQPKRGDARAVDTQPRKLLAHRKQIATLAEQ-KKTGLTIVPLKLFTSG 117

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMK 156
              K+ I   KGKK++DKR  +K R  + +  R M+
Sbjct: 118 RHIKLLIAAGKGKKKYDKRETLKRRAQEREAQRAMR 153


>UniRef50_Q6YR70 SsrA-binding protein n=3 Tax=Candidatus Phytoplasma asteris
           RepID=SSRP_ONYPE
          Length = 152

 Score =  156 bits (395), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 52/150 (34%), Positives = 94/150 (62%), Gaps = 2/150 (1%)

Query: 12  ATIALNKRARHEYFIEEE-FEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI 70
            TI  NK+A ++Y +E++ ++AG+ L G EVKS+R GK N+ +SY+ +++ EAF+    I
Sbjct: 2   KTIITNKKAFYDYSLEKKKYQAGIKLLGSEVKSIRIGKINLLNSYIHIKNEEAFIVNMTI 61

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVA 130
                 S  +  D  RT+KLLL + E+  +  ++  E  +V+ L +Y+     K++I ++
Sbjct: 62  LKYPF-SCCLAYDENRTKKLLLQKHEIIQIKNKIKTEKLSVIPLKVYFNKNLVKLEIALS 120

Query: 131 KGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           KGKKQHDKR+ +K+ + ++   + +KN ++
Sbjct: 121 KGKKQHDKRNALKDFDAKLRIQKTLKNFNQ 150


>UniRef50_Q601U1 SsrA-binding protein n=3 Tax=Mycoplasma hyopneumoniae
           RepID=SSRP_MYCH2
          Length = 145

 Score =  153 bits (387), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 48/147 (32%), Positives = 80/147 (54%), Gaps = 4/147 (2%)

Query: 13  TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
            +  NKRA  +Y I + F AG+ L GWEVKS++A   ++  ++   +  E FL  A I+ 
Sbjct: 3   ILIKNKRANFDYEIIDRFTAGIVLLGWEVKSIQAKNISLVGAFCYFKGHELFLSNAKISE 62

Query: 73  MAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKG 132
              +         R+RKLL+++ EL  +          ++ L +  KN   K++I +AKG
Sbjct: 63  YKGSRGQ----TDRSRKLLMHKHELKKILKEKITRKLAIIPLFIGQKNRKIKLEIALAKG 118

Query: 133 KKQHDKRSDIKEREWQVDKARIMKNAH 159
           K + DKR+ IKER+ + + A+ +KN +
Sbjct: 119 KTKLDKRNLIKERDQKREAAKFLKNYY 145


>UniRef50_B3PM30 SsrA-binding protein n=2 Tax=Mycoplasma RepID=B3PM30_MYCA5
          Length = 143

 Score =  151 bits (382), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 51/139 (36%), Positives = 73/139 (52%), Gaps = 5/139 (3%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLL-RDGEAFLFGANI 70
           A I  NK  + EY I   +E G++L GWE KSLRA  A +  S+  + +  E +L  A I
Sbjct: 2   ALIVKNKFPKLEYEIHSTYECGISLLGWEAKSLRAKNAKLESSFCSISQSDELWLNNAYI 61

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVA 130
               +    V  DP R+RKLL+++ E+  L     R     + LS YW+    KV+I +A
Sbjct: 62  AQYML----VKGDPLRSRKLLMHRHEIKKLRSLQQRLNLIFIPLSFYWRGNKIKVEIALA 117

Query: 131 KGKKQHDKRSDIKEREWQV 149
           K   +HDKR  IK+ E + 
Sbjct: 118 KHLNKHDKREKIKKDEAKK 136


>UniRef50_Q6KI26 SsrA-binding protein n=1 Tax=Mycoplasma mobile RepID=SSRP_MYCMO
          Length = 142

 Score =  149 bits (377), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 49/143 (34%), Positives = 81/143 (56%), Gaps = 4/143 (2%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             I  NK A   Y I E+++AGL L+GWEVKS+R  K  +  +++  ++ EA++   +I+
Sbjct: 2   KIIIKNKDAFFNYEILEKYKAGLILKGWEVKSIRENKVQLKGAFITFKNDEAYITNMHIS 61

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
                   V  +    RKLLLN+ E+  +  + NR    V+ L+L+W N + K++I +AK
Sbjct: 62  QYMS----VKGNELEPRKLLLNKHEIRHIQDKKNRNSLAVIPLNLFWDNNYIKLEIALAK 117

Query: 132 GKKQHDKRSDIKEREWQVDKARI 154
           GK + DKR  I E++ +    +I
Sbjct: 118 GKTKADKRHRILEKDVRKHLKKI 140


>UniRef50_A9G6R4 SmpB-like protein n=1 Tax=Sorangium cellulosum 'So ce 56'
           RepID=A9G6R4_SORC5
          Length = 139

 Score =  149 bits (376), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 52/122 (42%), Positives = 74/122 (60%), Gaps = 2/122 (1%)

Query: 34  LALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLN 93
           + L G EVK LR G A ++DS+  + +GEAFL G NI  M  A+     +  R RKLLL+
Sbjct: 1   MVLLGSEVKMLRDGAAELTDSWCAIENGEAFLKGVNIPVMPGAA--FGHEAKRPRKLLLH 58

Query: 94  QRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKAR 153
           + E++++   V REG TV+A  LY+KN   K +I +AKGKK  DKR  +KE++   +   
Sbjct: 59  ESEIEAIRKSVEREGMTVIATRLYFKNGRVKAEIALAKGKKTVDKRESLKEKDATREARA 118

Query: 154 IM 155
            M
Sbjct: 119 AM 120


>UniRef50_Q7NB37 SsrA-binding protein n=1 Tax=Mycoplasma gallisepticum
           RepID=SSRP_MYCGA
          Length = 144

 Score =  148 bits (375), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 50/142 (35%), Positives = 79/142 (55%), Gaps = 1/142 (0%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             +  NK+A++ Y + +++EAG++L G EVKSL      + DSYV++R  EA+L    I 
Sbjct: 3   RLLVNNKKAKYNYELLDKYEAGISLSGNEVKSLALHHGKLDDSYVIIRKNEAYLLNLLIP 62

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
                 T  V + TRTRKLLL++ E+  +     +    ++   +Y+ N   KV I +A+
Sbjct: 63  KYKF-DTSKVLNETRTRKLLLHKSEILKIDLIKKQHSLVIIPYQIYFVNNKIKVSIYLAR 121

Query: 132 GKKQHDKRSDIKEREWQVDKAR 153
            KK++DKR  IKERE      +
Sbjct: 122 PKKRYDKRQTIKEREINKKIRK 143


>UniRef50_Q057R8 TmRNA-binding protein n=1 Tax=Buchnera aphidicola str. Cc (Cinara
           cedri) RepID=Q057R8_BUCCC
          Length = 156

 Score =  147 bits (372), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 52/135 (38%), Positives = 85/135 (62%)

Query: 22  HEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVASTHVV 81
           + ++I+++F +G+ LQGWEVKS+RAG   ISD +V++++ E +L      P+   S    
Sbjct: 17  YNFYIKKKFISGIELQGWEVKSIRAGHVQISDGHVIIKNNEVYLTNVQFQPLIYTSDLKF 76

Query: 82  CDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSD 141
           C   R RKLLL ++E+  L     ++GYT+V + L+W  +WCK+KI + KGK + DKR D
Sbjct: 77  CLSNRVRKLLLKKKEIFFLKMYSIKKGYTIVPIKLFWIKSWCKIKIALVKGKSKMDKRQD 136

Query: 142 IKEREWQVDKARIMK 156
            +   W++++  I K
Sbjct: 137 KRNNSWKIERDTIFK 151


>UniRef50_C1D1M8 Putative SsrA-binding protein n=1 Tax=Deinococcus deserti VCD115
           RepID=C1D1M8_DEIDV
          Length = 143

 Score =  144 bits (363), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 54/139 (38%), Positives = 81/139 (58%), Gaps = 1/139 (0%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           +  N+RA +EY + E FEAG++L G EVKS+RAG  +  D++  L  G   L G  I   
Sbjct: 4   VYTNRRAHYEYELLERFEAGISLTGSEVKSIRAGGVDFRDAFARLHGGNVDLEGLYIPAY 63

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGK 133
             A T+   +P RTR+LLLN+ E+  L   + ++G T+V   LY K  + KV++ +A+GK
Sbjct: 64  KEA-TYNNHEPRRTRRLLLNRMEILKLKKGLEQKGLTLVPTRLYQKGQYFKVELALARGK 122

Query: 134 KQHDKRSDIKEREWQVDKA 152
           K HDKR    E+  + +  
Sbjct: 123 KLHDKRRADAEKTVRRELR 141


>UniRef50_A5IZI0 SsrA-binding protein n=3 Tax=Mycoplasma RepID=SSRP_MYCAP
          Length = 147

 Score =  141 bits (356), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 47/145 (32%), Positives = 84/145 (57%), Gaps = 6/145 (4%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             I+ N++  + Y I E+ EAG++L GWEVKS RA   N+++SY+  + GE FL  AN  
Sbjct: 2   KVISENRKGLYGYKIIEKHEAGISLLGWEVKSARAQTVNLTNSYIFFKKGELFLCNANFA 61

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVV-ALSLYWKN-AWCKVKIGV 129
              +    +  +  R RKLL++++E+  L  +++R   T +    +Y+ N +  KV+I +
Sbjct: 62  KYML----LKVEEDRDRKLLMHKKEIIRLKNKLDRLSSTTIKPTKIYFNNKSKIKVEIAL 117

Query: 130 AKGKKQHDKRSDIKEREWQVDKARI 154
            +G  + DKR D+K+R+ +    ++
Sbjct: 118 VQGMNRADKREDLKKRDNEKYMQKV 142


>UniRef50_Q8D389 SmpB protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of
           Glossina brevipalpis RepID=Q8D389_WIGBR
          Length = 160

 Score =  138 bits (350), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 70/155 (45%), Positives = 106/155 (68%)

Query: 3   KKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGE 62
           KKK  +     I+ NKRA++  +I++E EAGL+L+GWEVKSLR+   +IS SYV L+   
Sbjct: 2   KKKNTEKNFLIISRNKRAKYNTYIKKEMEAGLSLKGWEVKSLRSNNISISTSYVTLKSSS 61

Query: 63  AFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAW 122
           A+L GA        + + + +  R  +LLL++ E++SL+G V  +GY++V +SLYWK   
Sbjct: 62  AYLTGAVFQSNTNNNMNFIYEKERNIQLLLHKHEINSLFGYVKIKGYSIVVISLYWKYHK 121

Query: 123 CKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKN 157
            K+KIG+AKGKK+ DKR +IK+REW++ K+R+ K 
Sbjct: 122 AKLKIGIAKGKKKIDKRLEIKKREWEIKKSRLFKK 156


>UniRef50_A8Z637 SsrA (TmRNA)-binding protein n=2 Tax=Candidatus Sulcia muelleri
           RepID=A8Z637_SULMW
          Length = 146

 Score =  133 bits (336), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/141 (26%), Positives = 77/141 (54%), Gaps = 6/141 (4%)

Query: 15  ALNKRARHEYFIEEEFE--AGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
             N+RA  +Y +  +++  AG+ L G EVKS++    ++++SY  L     ++F   I+ 
Sbjct: 7   INNRRAYFDYELINKYKFIAGIELLGSEVKSIKNNNVSLNNSYCKLIKNNIYVFDMYISN 66

Query: 73  MAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NAWCKVKIGVAK 131
             +    +  +P R +KLLL ++E++ +Y ++N     ++  +++     + K+   +AK
Sbjct: 67  YLLG---INFNPKRVKKLLLKRKEINFIYNKINELKLNIIPTNIFLNERGYIKLIFFLAK 123

Query: 132 GKKQHDKRSDIKEREWQVDKA 152
            KK +DKR  IK + ++ +K 
Sbjct: 124 SKKNYDKRQSIKNKYFEREKN 144


>UniRef50_Q4A5T2 SsrA-binding protein n=2 Tax=Mycoplasma RepID=SSRP_MYCS5
          Length = 143

 Score =  128 bits (324), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 38/127 (29%), Positives = 71/127 (55%), Gaps = 6/127 (4%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             IA NK A+  Y I + FEAG+ L+GWEVKS RA    + ++Y  +   E FL  +   
Sbjct: 2   KIIATNKNAKRNYEILKTFEAGIKLEGWEVKSARASSVELKNAYCSIYKDEVFLKESYFK 61

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NAWCKVKIGVA 130
              +    +  + T+ RKLLL+++E+  +   + ++  +++   +Y+  N+  KV++ + 
Sbjct: 62  KYML----LKVEETKNRKLLLHKKEILKIKQEL-QKNLSLIPTKIYFNSNSLIKVELALG 116

Query: 131 KGKKQHD 137
           +G K++D
Sbjct: 117 RGLKKYD 123


>UniRef50_D0N0I1 Putative uncharacterized protein n=1 Tax=Phytophthora infestans
           T30-4 RepID=D0N0I1_PHYIN
          Length = 180

 Score =  125 bits (315), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 44/141 (31%), Positives = 67/141 (47%), Gaps = 6/141 (4%)

Query: 18  KRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVAS 77
           K A + Y +E E+  G+ LQ  EVKSLR   A++S ++      E FL   NI P+    
Sbjct: 44  KAAGNYYEVEREWNLGIVLQPSEVKSLRNRNADLSTAFGAFYKHELFLHDLNI-PVWRQG 102

Query: 78  THVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN-AWCKVKIGVAKGKKQH 136
                +PTR RKLL N+ EL  L    NR    ++ + +   N  W KV +     + Q 
Sbjct: 103 LIGRPEPTRVRKLLANRSELKKLQEFANRPNAQLIPMRIEVGNTGWIKVIMAACFKRGQI 162

Query: 137 DKRSDIKEREWQVDKARIMKN 157
           D R     R+ + +  R +++
Sbjct: 163 DNR----RRDDEREIKRQLRD 179


>UniRef50_C6SHY7 SsrA-binding protein n=1 Tax=Neisseria meningitidis alpha275
           RepID=C6SHY7_NEIME
          Length = 146

 Score =  122 bits (307), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 45/95 (47%), Positives = 65/95 (68%), Gaps = 1/95 (1%)

Query: 64  FLFGANITPM-AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAW 122
           F++ A I  +   ASTH+  D  R RKLLLNQ E++ L G+  R GYT+V L L++    
Sbjct: 50  FIWSAAILRLCPTASTHIKPDAVRPRKLLLNQSEINKLIGKTERAGYTIVPLDLHFSRGK 109

Query: 123 CKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKN 157
            K++IG+AKGKKQHDKR  +KE +W+ +K R++K+
Sbjct: 110 IKMEIGLAKGKKQHDKRQSMKEADWKREKQRLIKH 144


>UniRef50_C7LKD3 SsrA (TmRNA)-binding protein n=1 Tax=Candidatus Sulcia muelleri
           SMDSEM RepID=C7LKD3_SULMS
          Length = 150

 Score = 87.8 bits (217), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/141 (28%), Positives = 74/141 (52%), Gaps = 5/141 (3%)

Query: 12  ATIALNKRARHEYFIE--EEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
             I  NK+A  +Y +   E+F AG+ L G EVK ++  K +I +SY  L +   ++F   
Sbjct: 2   KLIINNKKAGFDYNLLKKEKFLAGIELLGIEVKLIKQKKVSIKNSYCKLINNNIYIFDMY 61

Query: 70  ITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN-AWCKVKIG 128
           I+   + +T     P R RKLLL ++E++ +  ++      ++   +   N  + K+K  
Sbjct: 62  ISNSNIYNTKFS--PKRRRKLLLKKKEINQIKKQIKNLNLNIIPTEIVLNNRNFIKIKFF 119

Query: 129 VAKGKKQHDKRSDIKEREWQV 149
           +AK KK+++KR+  K +  + 
Sbjct: 120 LAKSKKKYEKRNLRKIKSLEK 140


>UniRef50_Q7P475 Small protein B n=1 Tax=Fusobacterium nucleatum subsp. vincentii
          ATCC 49256 RepID=Q7P475_FUSNV
          Length = 84

 Score = 83.9 bits (207), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/58 (48%), Positives = 44/58 (75%)

Query: 13 TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI 70
           IA NK+A  +YFIEE++EAG+ L+G EVKS++AGK +I +S+V + + E F+ G ++
Sbjct: 2  IIANNKKAFFDYFIEEKYEAGIELKGSEVKSIKAGKVSIKESFVRIINDEIFIMGMSV 59


>UniRef50_UPI0001912596 SsrA-binding protein n=1 Tax=Salmonella enterica subsp. enterica
          serovar Typhi str. E98-3139 RepID=UPI0001912596
          Length = 98

 Score = 65.4 bits (159), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 40/47 (85%), Positives = 42/47 (89%), Gaps = 1/47 (2%)

Query: 3  KKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVK-SLRAGK 48
          ++KAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVK S R   
Sbjct: 6  EEKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKISARRKS 52


>UniRef50_Q05FT0 Putative uncharacterized protein n=1 Tax=Candidatus Carsonella
           ruddii PV RepID=Q05FT0_CARRP
          Length = 116

 Score = 43.5 bits (102), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 16/119 (13%)

Query: 13  TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
            +  NK+   +YFI + F AG+ L+  ++  ++    NI+D  + L D    L       
Sbjct: 1   MLKKNKKILTKYFIIKTFIAGMILKSNDILIIKKNILNINDYIIKLSDNNINLIN----- 55

Query: 73  MAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
                        +   LLLN+RE + +      + Y  + + L+  N   K+KI + K
Sbjct: 56  -----------KKKKIILLLNKREQNIILYYNYNKNYKCIPIELFKLNFLFKLKISIVK 103


  Database: uniref50.fasta
    Posted date:  Mar 8, 2010 10:38 AM
  Number of letters in database: 1,040,396,356
  Number of sequences in database:  3,077,464
  
Lambda     K      H
   0.313    0.181    0.605 

Lambda     K      H
   0.267   0.0556    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 857,471,395
Number of Sequences: 3077464
Number of extensions: 47974495
Number of successful extensions: 117561
Number of sequences better than 1.0e-01: 125
Number of HSP's better than  0.1 without gapping: 241
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 117049
Number of HSP's gapped (non-prelim): 249
length of query: 160
length of database: 1,040,396,356
effective HSP length: 118
effective length of query: 42
effective length of database: 677,255,604
effective search space: 28444735368
effective search space used: 28444735368
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.0 bits)
S2: 88 (38.1 bits)
