BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= batch____
         (160 letters)

Database: uniref50.fasta 
           3,077,464 sequences; 1,040,396,356 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_B5F2A0 SsrA-binding protein n=362 Tax=Proteobacteria Re...   238   4e-62
UniRef50_Q3MAP3 SsrA-binding protein n=12 Tax=Cyanobacteria RepI...   226   2e-58
UniRef50_A5UPS2 SsrA-binding protein n=171 Tax=Bacteria RepID=SS...   224   7e-58
UniRef50_A9WJ45 SsrA-binding protein n=32 Tax=Bacteria RepID=SSR...   218   5e-56
UniRef50_A4J8T4 SsrA-binding protein n=14 Tax=Bacteria RepID=SSR...   215   4e-55
UniRef50_A1TSJ4 SsrA-binding protein n=6 Tax=Proteobacteria RepI...   214   6e-55
UniRef50_A0PYP8 SsrA-binding protein n=125 Tax=Bacteria RepID=SS...   214   6e-55
UniRef50_Q12AT7 SsrA-binding protein n=8 Tax=Burkholderiales Rep...   214   7e-55
UniRef50_B7IP12 SsrA-binding protein n=102 Tax=Bacteria RepID=SS...   214   7e-55
UniRef50_Q3JBU6 SsrA-binding protein n=47 Tax=Proteobacteria Rep...   213   1e-54
UniRef50_A0QU63 SsrA-binding protein n=25 Tax=Bacteria RepID=SSR...   212   2e-54
UniRef50_A3PWV5 SsrA-binding protein n=83 Tax=cellular organisms...   211   6e-54
UniRef50_Q2RLS9 SsrA-binding protein n=8 Tax=Clostridia RepID=SS...   211   6e-54
UniRef50_C9KNB2 SsrA-binding protein n=1 Tax=Mitsuokella multaci...   211   9e-54
UniRef50_A5G3A5 SsrA-binding protein n=5 Tax=Bacteria RepID=SSRP...   211   9e-54
UniRef50_A1WX40 SsrA-binding protein n=13 Tax=Gammaproteobacteri...   210   1e-53
UniRef50_B1MEU3 SsrA-binding protein n=68 Tax=Bacteria RepID=SSR...   209   2e-53
UniRef50_C8W8A6 SsrA-binding protein n=5 Tax=Coriobacteriaceae R...   209   2e-53
UniRef50_Q72DV1 SsrA-binding protein n=12 Tax=Bacteria RepID=SSR...   209   4e-53
UniRef50_B0TLG2 SsrA-binding protein n=12 Tax=Proteobacteria Rep...   208   5e-53
UniRef50_C7M112 SsrA-binding protein n=1 Tax=Acidimicrobium ferr...   208   6e-53
UniRef50_Q4JX42 SsrA-binding protein n=87 Tax=Bacteria RepID=SSR...   207   9e-53
UniRef50_A1WPQ3 SsrA-binding protein n=5 Tax=Proteobacteria RepI...   207   1e-52
UniRef50_Q03AJ7 SsrA-binding protein n=110 Tax=Bacteria RepID=SS...   207   1e-52
UniRef50_B8H482 SsrA-binding protein n=83 Tax=Proteobacteria Rep...   206   1e-52
UniRef50_A1KN98 SsrA-binding protein n=62 Tax=Bacteria RepID=SSR...   206   2e-52
UniRef50_A8SP47 Putative uncharacterized protein n=2 Tax=Bacteri...   206   2e-52
UniRef50_Q1H274 SsrA-binding protein n=29 Tax=Bacteria RepID=SSR...   205   3e-52
UniRef50_Q2N9K0 SsrA-binding protein n=85 Tax=cellular organisms...   205   4e-52
UniRef50_D1BK11 SsrA-binding protein n=20 Tax=Bacteria RepID=D1B...   203   1e-51
UniRef50_B2V9T6 SsrA-binding protein n=7 Tax=Bacteria RepID=SSRP...   203   1e-51
UniRef50_C8PPG5 SsrA-binding protein n=1 Tax=Treponema vincentii...   203   2e-51
UniRef50_C4Z0S0 SsrA-binding protein n=22 Tax=Bacteria RepID=C4Z...   202   3e-51
UniRef50_A0LGB7 SsrA-binding protein n=7 Tax=Bacteria RepID=SSRP...   201   8e-51
UniRef50_B2UY12 SsrA-binding protein n=24 Tax=Bacteria RepID=SSR...   201   9e-51
UniRef50_A3ZLQ9 SsrA-binding protein n=2 Tax=Planctomycetaceae R...   199   2e-50
UniRef50_D2RBT7 SsrA-binding protein n=3 Tax=Bacteria RepID=D2RB...   198   5e-50
UniRef50_B2S2D1 SsrA-binding protein n=2 Tax=Treponema pallidum ...   198   6e-50
UniRef50_A5EXZ5 SsrA-binding protein n=4 Tax=Proteobacteria RepI...   197   9e-50
UniRef50_C0QVL0 SsrA-binding protein n=2 Tax=Brachyspira RepID=C...   196   2e-49
UniRef50_C1F4B8 SsrA-binding protein n=1 Tax=Acidobacterium caps...   196   2e-49
UniRef50_D1U5X0 SsrA-binding protein n=2 Tax=Desulfovibrio RepID...   196   2e-49
UniRef50_Q3ZZ31 SsrA-binding protein n=6 Tax=Bacteria RepID=SSRP...   196   3e-49
UniRef50_D2R3D1 SsrA-binding protein n=1 Tax=Pirellula staleyi D...   195   4e-49
UniRef50_A7HGZ0 SsrA-binding protein n=8 Tax=Bacteria RepID=SSRP...   195   5e-49
UniRef50_Q7UZP2 SsrA-binding protein n=33 Tax=cellular organisms...   195   5e-49
UniRef50_A9NF97 SsrA-binding protein n=1 Tax=Acholeplasma laidla...   194   7e-49
UniRef50_Q2GCW3 SsrA-binding protein n=2 Tax=Neorickettsia RepID...   192   3e-48
UniRef50_Q1GDQ2 SsrA-binding protein n=12 Tax=Rhodobacterales Re...   192   3e-48
UniRef50_A9G109 SsrA-binding protein n=1 Tax=Sorangium cellulosu...   192   4e-48
UniRef50_Q04E23 SsrA-binding protein n=4 Tax=Lactobacillales Rep...   191   6e-48
UniRef50_Q7UH38 SsrA-binding protein n=1 Tax=Rhodopirellula balt...   191   6e-48
UniRef50_A6G542 SsrA-binding protein n=2 Tax=Proteobacteria RepI...   191   6e-48
UniRef50_Q1MRU5 SsrA-binding protein n=5 Tax=Desulfovibrionales ...   191   6e-48
UniRef50_C1ZDG5 SsrA-binding protein n=1 Tax=Planctomyces limnop...   190   2e-47
UniRef50_D2PSC9 SsrA-binding protein n=1 Tax=Kribbella flavida D...   189   2e-47
UniRef50_Q1IQ53 SsrA-binding protein n=1 Tax=Candidatus Koribact...   189   2e-47
UniRef50_B2KCF8 SsrA-binding protein n=1 Tax=Elusimicrobium minu...   189   3e-47
UniRef50_Q9Z8K1 SsrA-binding protein n=2 Tax=Chlamydophila pneum...   188   5e-47
UniRef50_Q254F5 SsrA-binding protein n=1 Tax=Chlamydophila felis...   188   5e-47
UniRef50_B2ULK9 SsrA-binding protein n=3 Tax=Verrucomicrobia Rep...   188   6e-47
UniRef50_Q2S237 SsrA-binding protein n=1 Tax=Salinibacter ruber ...   188   6e-47
UniRef50_A5FZS6 SsrA-binding protein n=11 Tax=Alphaproteobacteri...   187   8e-47
UniRef50_D1NAK5 SsrA-binding protein n=1 Tax=Victivallis vadensi...   185   3e-46
UniRef50_C7JH78 Trans-translation helper factor SmpB n=8 Tax=Ace...   185   3e-46
UniRef50_C9LGK2 SsrA-binding protein n=8 Tax=Prevotella RepID=C9...   184   6e-46
UniRef50_C2D8P0 TmRNA-binding protein n=2 Tax=Coriobacteriaceae ...   184   6e-46
UniRef50_A9BF44 SsrA-binding protein n=3 Tax=Bacteria RepID=SSRP...   184   7e-46
UniRef50_C6HYH8 SsrA-binding protein n=1 Tax=Leptospirillum ferr...   184   1e-45
UniRef50_A6DIW5 SsrA-binding protein n=2 Tax=Bacteria RepID=A6DI...   183   1e-45
UniRef50_Q6MAG8 SsrA-binding protein n=4 Tax=Chlamydiales RepID=...   183   2e-45
UniRef50_A0FD64 TmRNA-binding protein n=1 Tax=Coxiella endosymbi...   182   2e-45
UniRef50_B3DV24 TmRNA-binding protein n=1 Tax=Methylacidiphilum ...   182   3e-45
UniRef50_B9XT05 SsrA-binding protein n=1 Tax=bacterium Ellin514 ...   182   3e-45
UniRef50_A6L927 SsrA-binding protein n=17 Tax=Bacteria RepID=SSR...   182   4e-45
UniRef50_Q83N13 SsrA-binding protein n=2 Tax=Tropheryma whipplei...   181   5e-45
UniRef50_B2GAM5 SsrA-binding protein n=4 Tax=Bacteria RepID=SSRP...   181   5e-45
UniRef50_Q04TV5 SsrA-binding protein n=6 Tax=Leptospira RepID=SS...   181   5e-45
UniRef50_D1VZH7 SsrA-binding protein n=1 Tax=Prevotella timonens...   180   1e-44
UniRef50_C0JZT0 SsrA-binding protein n=1 Tax=uncultured bacteriu...   180   1e-44
UniRef50_Q6MQ46 SsrA-binding protein n=1 Tax=Bdellovibrio bacter...   180   1e-44
UniRef50_C9RKN3 SsrA-binding protein n=1 Tax=Fibrobacter succino...   179   2e-44
UniRef50_Q02A69 SsrA-binding protein n=1 Tax=Candidatus Solibact...   179   3e-44
UniRef50_B8D947 SsrA-binding protein n=4 Tax=Buchnera aphidicola...   179   4e-44
UniRef50_A8EWH6 SsrA-binding protein n=48 Tax=Epsilonproteobacte...   177   7e-44
UniRef50_C5JAN1 SsrA-binding protein n=1 Tax=uncultured bacteriu...   177   8e-44
UniRef50_Q2ST23 SsrA-binding protein n=4 Tax=Mollicutes RepID=SS...   177   1e-43
UniRef50_Q3ARF1 SsrA-binding protein n=11 Tax=Chlorobiaceae RepI...   177   1e-43
UniRef50_B1AI43 SsrA-binding protein n=16 Tax=Mycoplasmataceae R...   177   1e-43
UniRef50_B7KVC8 SsrA-binding protein n=25 Tax=cellular organisms...   176   2e-43
UniRef50_A0M3P0 SsrA-binding protein n=13 Tax=Bacteroidetes RepI...   174   7e-43
UniRef50_B7GAQ2 Predicted protein (Fragment) n=3 Tax=Bacillariop...   172   2e-42
UniRef50_B3EUI8 SsrA-binding protein n=4 Tax=Bacteroidetes RepID...   172   4e-42
UniRef50_Q11TP3 SsrA-binding protein n=36 Tax=Bacteroidetes RepI...   169   3e-41
UniRef50_B1GZD8 SsrA-binding protein SmpB n=1 Tax=uncultured Ter...   167   1e-40
UniRef50_Q6Q8U8 Predicted SsrA n=1 Tax=uncultured marine gamma p...   166   2e-40
UniRef50_UPI00016992A0 SsrA-binding protein n=1 Tax=Endoriftia p...   165   3e-40
UniRef50_Q89AM9 SsrA-binding protein n=1 Tax=Buchnera aphidicola...   165   4e-40
UniRef50_P75043 SsrA-binding protein n=2 Tax=Mycoplasma RepID=SS...   164   8e-40
UniRef50_B1VAG4 SsrA-binding protein n=2 Tax=Candidatus Phytopla...   164   1e-39
UniRef50_C6X237 TmRNA-binding protein SmpB n=2 Tax=Flavobacteria...   164   1e-39
UniRef50_Q1LSR7 SsrA-binding protein n=17 Tax=Gammaproteobacteri...   162   4e-39
UniRef50_Q0SPD1 SsrA-binding protein n=20 Tax=Borrelia RepID=SSR...   159   3e-38
UniRef50_Q7VRQ2 TmRNA-binding protein n=2 Tax=Candidatus Blochma...   157   9e-38
UniRef50_A5KSW6 SsrA-binding protein n=2 Tax=candidate division ...   157   2e-37
UniRef50_Q6YR70 SsrA-binding protein n=3 Tax=Candidatus Phytopla...   156   3e-37
UniRef50_Q601U1 SsrA-binding protein n=3 Tax=Mycoplasma hyopneum...   153   2e-36
UniRef50_B3PM30 SsrA-binding protein n=2 Tax=Mycoplasma RepID=B3...   151   9e-36
UniRef50_Q6KI26 SsrA-binding protein n=1 Tax=Mycoplasma mobile R...   149   3e-35
UniRef50_A9G6R4 SmpB-like protein n=1 Tax=Sorangium cellulosum '...   149   4e-35
UniRef50_Q7NB37 SsrA-binding protein n=1 Tax=Mycoplasma gallisep...   148   6e-35
UniRef50_Q057R8 TmRNA-binding protein n=1 Tax=Buchnera aphidicol...   147   1e-34
UniRef50_C1D1M8 Putative SsrA-binding protein n=1 Tax=Deinococcu...   144   1e-33
UniRef50_A5IZI0 SsrA-binding protein n=3 Tax=Mycoplasma RepID=SS...   141   9e-33
UniRef50_Q8D389 SmpB protein n=1 Tax=Wigglesworthia glossinidia ...   138   4e-32
UniRef50_A8Z637 SsrA (TmRNA)-binding protein n=2 Tax=Candidatus ...   133   2e-30
UniRef50_Q4A5T2 SsrA-binding protein n=2 Tax=Mycoplasma RepID=SS...   128   4e-29
UniRef50_D0N0I1 Putative uncharacterized protein n=1 Tax=Phytoph...   125   5e-28
UniRef50_C6SHY7 SsrA-binding protein n=1 Tax=Neisseria meningiti...   122   4e-27
UniRef50_C7LKD3 SsrA (TmRNA)-binding protein n=1 Tax=Candidatus ...    88   1e-16
UniRef50_Q7P475 Small protein B n=1 Tax=Fusobacterium nucleatum ...    84   2e-15
UniRef50_UPI0001912596 SsrA-binding protein n=1 Tax=Salmonella e...    65   6e-10
UniRef50_Q05FT0 Putative uncharacterized protein n=1 Tax=Candida...    43   0.003

>UniRef50_B5F2A0 SsrA-binding protein n=362 Tax=Proteobacteria RepID=SSRP_SALA4
          Length = 160

 Score =  238 bits (609), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 151/160 (94%), Positives = 157/160 (98%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANI DSYV+L+D
Sbjct: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANIGDSYVILKD 60

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GEA+LFGAN TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGR+NREGYTVVALSLYWKN
Sbjct: 61  GEAWLFGANFTPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRINREGYTVVALSLYWKN 120

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           AWCKVKIGVAKGKKQHDKRSD+KEREWQ+DKARIMKNA R
Sbjct: 121 AWCKVKIGVAKGKKQHDKRSDLKEREWQLDKARIMKNAGR 160


>UniRef50_Q3MAP3 SsrA-binding protein n=12 Tax=Cyanobacteria RepID=SSRP_ANAVT
          Length = 155

 Score =  226 bits (576), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 72/155 (46%), Positives = 96/155 (61%)

Query: 4   KKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEA 63
                     I  N++AR+ Y I E FEAG+ L G EVKS+RAGK N+ D Y LLRDGE 
Sbjct: 1   MSDKSESYKVITDNRQARYLYEILETFEAGIQLTGTEVKSIRAGKVNLQDGYALLRDGEI 60

Query: 64  FLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWC 123
           +L  A+I+P   +  +   +P RTRKLLL+++E+  L G+V ++G T+V L +Y K  W 
Sbjct: 61  WLINAHISPYNASGQYFNHEPRRTRKLLLHRQEIRKLIGKVEQQGLTLVPLKMYLKRGWV 120

Query: 124 KVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
           KV I + KGKK HDKR  +K R+ Q D  R MKN 
Sbjct: 121 KVSIALGKGKKLHDKRESLKRRQDQRDIQRAMKNY 155


>UniRef50_A5UPS2 SsrA-binding protein n=171 Tax=Bacteria RepID=SSRP_ROSS1
          Length = 158

 Score =  224 bits (572), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 71/150 (47%), Positives = 102/150 (68%)

Query: 11  SATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI 70
              +A N++ARH+YFIEE +EAG+AL G E+KS+RAG+ N+   YV + DGEA+L+  +I
Sbjct: 8   ERVVADNRKARHDYFIEETYEAGIALTGSEIKSIRAGQVNLRGGYVRIVDGEAWLYDVHI 67

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVA 130
            P   +  +   +PTR RKLLL++RE+  + G+V R+GYT+V L LY +    KV+IG+A
Sbjct: 68  APYEQSGAYFNHEPTRPRKLLLHRREISRIAGQVERQGYTLVPLRLYLRGRRAKVEIGLA 127

Query: 131 KGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           +GKK +DKR DI  RE + D  R +K   R
Sbjct: 128 RGKKLYDKRDDIARREARRDIERALKERTR 157


>UniRef50_A9WJ45 SsrA-binding protein n=32 Tax=Bacteria RepID=SSRP_CHLAA
          Length = 160

 Score =  218 bits (556), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 71/158 (44%), Positives = 100/158 (63%), Gaps = 2/158 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           MT  K   PG   +A N++ARH+Y IEE  EAG+ L G E+KS+RAG+ N+  S+  + D
Sbjct: 1   MTATKHKHPG--VVAENRKARHDYDIEETIEAGIVLSGSEIKSVRAGRVNLRGSFARVID 58

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
            E FL+ A+I P   +  +   DP R RKLLL++RE++ L G V  +G T+V L +Y+K 
Sbjct: 59  DEVFLYDAHIAPYEQSGKYFNHDPMRPRKLLLHRREINRLNGLVRMKGMTLVPLKVYFKG 118

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
              KV++GVA+GKK +DKR DI  R+   D  R +K A
Sbjct: 119 RRAKVELGVARGKKIYDKREDIARRDAARDIDRALKRA 156


>UniRef50_A4J8T4 SsrA-binding protein n=14 Tax=Bacteria RepID=SSRP_DESRM
          Length = 161

 Score =  215 bits (549), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 65/161 (40%), Positives = 101/161 (62%), Gaps = 2/161 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M  K   + G  TI  N+RARHEY + E +EAG+AL G EVKSLRAGKAN+ D++  + +
Sbjct: 1   MAAKATSEKGFKTITDNRRARHEYHVIETYEAGIALSGTEVKSLRAGKANLQDAFARVEN 60

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK- 119
           GE  L+  +I+P    +     +P RTR+LL++++E+  LYG+V  +G  ++ L +Y+  
Sbjct: 61  GEMMLYNLHISPYEQGN-RFNHEPKRTRRLLMHKQEILRLYGKVREKGLALIPLKVYFNP 119

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
               KV++ +A+GKK +DKR DI  R+ + D  R M+   +
Sbjct: 120 RGKVKVQLALAQGKKSYDKRHDIAARDAKRDMDRAMRERQK 160


>UniRef50_A1TSJ4 SsrA-binding protein n=6 Tax=Proteobacteria RepID=SSRP_ACIAC
          Length = 157

 Score =  214 bits (547), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 78/160 (48%), Positives = 104/160 (65%), Gaps = 3/160 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M KK         IA NK+A   YF EE  EAG+ L GWEVK+LR GK  ++D YV++R+
Sbjct: 1   MAKKPETLSR---IADNKKAAFNYFFEERHEAGMVLHGWEVKALREGKVQLTDGYVVIRE 57

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GE +L G  I P+  ASTHV  D  RT+KLLL++ E+  L  +V ++GYT+V L+L+W N
Sbjct: 58  GELYLIGCQINPLKTASTHVSPDAVRTKKLLLHKDEIKRLTAKVEQKGYTLVPLNLHWTN 117

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
              K +I +AKGK +HDKR  IKERE + +  R MK+ HR
Sbjct: 118 GRAKCEIALAKGKAEHDKRDTIKEREGKREVERAMKSRHR 157


>UniRef50_A0PYP8 SsrA-binding protein n=125 Tax=Bacteria RepID=SSRP_CLONN
          Length = 157

 Score =  214 bits (547), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 74/160 (46%), Positives = 103/160 (64%), Gaps = 4/160 (2%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M KK      + T+A N++A H+YFIEE FEAG+AL G EVKS+R GKAN+ DSY  +R+
Sbjct: 1   MGKKDKK---NNTLAQNRKAYHDYFIEETFEAGIALVGTEVKSIRGGKANLKDSYASIRN 57

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GE F+   +++P    +     DP R RKLLL++ ++++L G   ++GYT++ LSLY KN
Sbjct: 58  GEVFVCNMHVSPYEQGNI-FNRDPLRERKLLLHKSQINTLLGYTAQQGYTLIPLSLYLKN 116

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
              KV +GVAKGKK +DKR  I  +  + D  R MK   R
Sbjct: 117 GRVKVALGVAKGKKNYDKRDAIAAKAAKRDIDRQMKERMR 156


>UniRef50_Q12AT7 SsrA-binding protein n=8 Tax=Burkholderiales RepID=SSRP_POLSJ
          Length = 149

 Score =  214 bits (547), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 73/147 (49%), Positives = 103/147 (70%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           IA NK+A   Y IEE FEAG+ L+GWEVKS+R GK  ++D YV++R GE F+ G  I P+
Sbjct: 3   IADNKKAIFNYHIEERFEAGMVLEGWEVKSVREGKVQLTDGYVVIRGGELFIIGCQINPL 62

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGK 133
             ASTHV  D  RT+KLL+++ E+  L G+V ++G+T+V L+++WK    K +IG+AKGK
Sbjct: 63  GTASTHVRPDSVRTKKLLMHKDEIRRLVGKVEQKGFTLVPLNMHWKAGKVKCEIGLAKGK 122

Query: 134 KQHDKRSDIKEREWQVDKARIMKNAHR 160
            +HDKR  IK+RE + +  R MK+  R
Sbjct: 123 GEHDKRDTIKDREGKREVERAMKSRSR 149


>UniRef50_B7IP12 SsrA-binding protein n=102 Tax=Bacteria RepID=SSRP_BACC2
          Length = 155

 Score =  214 bits (546), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 67/153 (43%), Positives = 101/153 (66%), Gaps = 1/153 (0%)

Query: 8   KPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFG 67
           K     IA NK+A H+YFIEE +EAGL LQG E+KS+RAG+ N+ D++  + +GE ++  
Sbjct: 3   KGTGKVIAQNKKAFHDYFIEETYEAGLVLQGTEIKSIRAGRVNLKDAFARIHNGEVWVHN 62

Query: 68  ANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKI 127
            +I      +     DP RTRKLLL+++E+D L G     GY +V L +Y KN + K+ +
Sbjct: 63  MHINTYEQGN-RFNHDPLRTRKLLLHKKEIDKLAGAAKETGYALVPLRIYLKNGFAKMAL 121

Query: 128 GVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           G+AKGKKQ+DKR D+KE+E + + AR+ ++  +
Sbjct: 122 GLAKGKKQYDKRHDLKEKEAKREIARVFRDRQK 154


>UniRef50_Q3JBU6 SsrA-binding protein n=47 Tax=Proteobacteria RepID=SSRP_NITOC
          Length = 189

 Score =  213 bits (544), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 77/145 (53%), Positives = 109/145 (75%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             IALN++ARH+YFIEE +EAGL L+GWEVKSLRAG+  +++ Y LL+ GE +LFG +++
Sbjct: 14  NVIALNRKARHDYFIEERYEAGLVLEGWEVKSLRAGRVQLNEGYCLLKGGEVWLFGVHLS 73

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
           P+   STH+  DP RTRKLLL+ +EL  L G V R+GY ++ L+LYWK    K++I +AK
Sbjct: 74  PLNTVSTHIHPDPLRTRKLLLHAKELRKLIGAVERKGYALIPLTLYWKRGRVKLEIALAK 133

Query: 132 GKKQHDKRSDIKEREWQVDKARIMK 156
           GK+++DKR+  KE+EW   K R++K
Sbjct: 134 GKQKYDKRATEKEKEWTRQKERLLK 158


>UniRef50_A0QU63 SsrA-binding protein n=25 Tax=Bacteria RepID=SSRP_MYCS2
          Length = 161

 Score =  212 bits (542), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 60/160 (37%), Positives = 98/160 (61%), Gaps = 2/160 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           MTKK A    +  +A N++ARH Y I + +EAG+ L G EVKSLR G+A+++D++  + D
Sbjct: 1   MTKKSAS-SNNKVVATNRKARHNYTILDTYEAGIVLMGTEVKSLREGQASLADAFATVDD 59

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GE +L   +I       T     P R RKLLL+++++D+L G++     T+V LS+Y+ +
Sbjct: 60  GEIWLRNVHIAEY-HHGTWTNHAPRRNRKLLLHRKQIDNLIGKIRDGNLTLVPLSIYFTD 118

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
              KV++ +A+GK+ HDKR D+  R+ Q +  R +    +
Sbjct: 119 GKVKVELALARGKQAHDKRQDLARRDAQREVIRELGRRAK 158


>UniRef50_A3PWV5 SsrA-binding protein n=83 Tax=cellular organisms RepID=SSRP_MYCSJ
          Length = 168

 Score =  211 bits (538), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 59/155 (38%), Positives = 93/155 (60%), Gaps = 1/155 (0%)

Query: 6   AHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFL 65
                +  +A N+RARH Y I + +EAG+AL G EVKSLR G+A+++D++  + DGE +L
Sbjct: 12  TKDRNNQVVASNRRARHNYAILDTYEAGIALMGTEVKSLRDGQASLADAFATVDDGEIWL 71

Query: 66  FGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKV 125
              +I      S      P R RKLLL++RE+D+L G++     T+V LSLY+     KV
Sbjct: 72  RNLHIPEYQHGS-WTNHAPRRNRKLLLHRREIDNLIGKIRDGNLTLVPLSLYFTGGKVKV 130

Query: 126 KIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           ++ +A+GK+ HDKR D+  R+ + +  R +    +
Sbjct: 131 ELALARGKQAHDKRQDLARRDAEREVVRELGRRAK 165


>UniRef50_Q2RLS9 SsrA-binding protein n=8 Tax=Clostridia RepID=SSRP_MOOTA
          Length = 155

 Score =  211 bits (538), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 62/150 (41%), Positives = 95/150 (63%), Gaps = 2/150 (1%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             +  N+RARH+YFIEE +EAG+AL G EVKSLR G+ANI DSY  + +GE  L   +I+
Sbjct: 6   KVVTDNRRARHDYFIEETYEAGIALTGTEVKSLRNGRANIKDSYARVENGELILHDMHIS 65

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NAWCKVKIGVA 130
           P    +     +P R R+LL+++ E+  LYG+V  +G T++ L +Y+      KV++ + 
Sbjct: 66  PYEQGN-RFNHEPRRPRRLLMHRYEIQRLYGKVREKGLTLIPLKVYFNERGLAKVELALV 124

Query: 131 KGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           KGK+ +DKR DI  R+ Q + AR ++   +
Sbjct: 125 KGKRLYDKREDIAARDAQREIARALRERQK 154


>UniRef50_C9KNB2 SsrA-binding protein n=1 Tax=Mitsuokella multacida DSM 20544
           RepID=C9KNB2_9FIRM
          Length = 157

 Score =  211 bits (537), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 66/160 (41%), Positives = 103/160 (64%), Gaps = 4/160 (2%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M +K A   G  T+  N++ARH+YFI E +EAG+ALQG EVKSLRAG+AN+ DSY  +++
Sbjct: 1   MGRKNA---GIKTVCENRKARHDYFIHETYEAGIALQGTEVKSLRAGRANLKDSYASIQN 57

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GE F+   +I+P    +     DP R RKLL+++ E+  L+ +   +G+T+V L +Y+K 
Sbjct: 58  GEIFVENLHISPYDQGNI-FNHDPLRRRKLLMHKAEIVKLFAKTREKGFTLVPLKIYFKQ 116

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
              K++I +A GK  +DKR D+ E+  + +  R +K+  R
Sbjct: 117 GRAKMEIALASGKHNYDKRQDLHEKAAKREIERALKDRQR 156


>UniRef50_A5G3A5 SsrA-binding protein n=5 Tax=Bacteria RepID=SSRP_GEOUR
          Length = 151

 Score =  211 bits (537), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 72/151 (47%), Positives = 106/151 (70%), Gaps = 1/151 (0%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
               I  NK+A H+YFIEE+FEAG+ L+G EVKSLR GKAN++DS+ L+++GEAFL   +
Sbjct: 2   SEKLICNNKKAYHDYFIEEKFEAGMVLKGTEVKSLRIGKANLNDSFALVKNGEAFLHNLH 61

Query: 70  ITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGV 129
           I+P    +     DP R RKLLL+++E+  L+  +  +GYTVV L LY+K+   KV++G+
Sbjct: 62  ISPYDFGNRE-NHDPDRMRKLLLHKKEIGKLFSMIREQGYTVVPLRLYFKDGLVKVEVGL 120

Query: 130 AKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           AKGKK +DKR D+K+++ + D A  +K  +R
Sbjct: 121 AKGKKLYDKREDMKKKDMRRDVAVALKERNR 151


>UniRef50_A1WX40 SsrA-binding protein n=13 Tax=Gammaproteobacteria RepID=SSRP_HALHL
          Length = 165

 Score =  210 bits (536), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 87/154 (56%), Positives = 121/154 (78%)

Query: 5   KAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAF 64
           K+ K     IALN++A  ++F+EE  EAGLAL+GWEVK+LRA + N+++S+VL+R GEA+
Sbjct: 10  KSKKTEGNVIALNRKAGFDFFVEERLEAGLALEGWEVKALRAKRVNLTESHVLVRRGEAW 69

Query: 65  LFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCK 124
           L G NITP++ ASTH+  DPTRTRKLLL++RE++ L G V+R+GYTVV L LYWK    K
Sbjct: 70  LIGCNITPLSTASTHIHPDPTRTRKLLLHRREINRLIGAVDRDGYTVVPLKLYWKRGRAK 129

Query: 125 VKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
           ++IGVAKGKK+ DKR+D KE++WQ  + R++K+ 
Sbjct: 130 IEIGVAKGKKKQDKRADKKEQDWQRQRERLLKHK 163


>UniRef50_B1MEU3 SsrA-binding protein n=68 Tax=Bacteria RepID=SSRP_MYCA9
          Length = 159

 Score =  209 bits (534), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 63/160 (39%), Positives = 95/160 (59%), Gaps = 3/160 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M+KK A   G   IA N++ARH Y I + +EAG+ L G EVK+LR GKA++ D++  + D
Sbjct: 1   MSKKPAD--GRKVIATNRKARHNYSIIDVYEAGVQLVGTEVKTLREGKASLVDAFATVDD 58

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GE +L G +I       T     P R RKLLL++ ++D L G+      T+V LSLY+ +
Sbjct: 59  GEVWLRGVHIPQYDH-GTWTNHAPLRNRKLLLHRAQIDMLVGKTRDGNLTLVPLSLYFLD 117

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
              KV++ +A+GK+ HDKR DI +R+   +  R +    +
Sbjct: 118 GKVKVELALARGKQAHDKRQDIAKRDASREITRELGRRAK 157


>UniRef50_C8W8A6 SsrA-binding protein n=5 Tax=Coriobacteriaceae RepID=C8W8A6_ATOPD
          Length = 161

 Score =  209 bits (534), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 61/161 (37%), Positives = 98/161 (60%), Gaps = 2/161 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M + +  + G  +IA N+ ARHEY I E FE GL L G EVKSLR     ++D++ L+RD
Sbjct: 1   MAENQVKQQGKKSIARNRSARHEYEIGETFECGLVLTGTEVKSLRERGCQLTDTFCLIRD 60

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-K 119
           GEA++ G ++ P          DP R RKLLL++R++D L G++ ++G  +V L +Y+ +
Sbjct: 61  GEAWIHGMHLHPYTNGGVW-NVDPDRKRKLLLHRRQIDYLDGKLRQKGLALVPLEIYFDE 119

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           +   K+ I +++GKK +DKR+   +R+   +  R +K   R
Sbjct: 120 HNRVKLLIALSQGKKLYDKRASAAKRDSDREIQRALKERSR 160


>UniRef50_Q72DV1 SsrA-binding protein n=12 Tax=Bacteria RepID=SSRP_DESVH
          Length = 154

 Score =  209 bits (532), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 74/155 (47%), Positives = 95/155 (61%), Gaps = 4/155 (2%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M+KK    PG+  IA NK+ARH Y + +  EAG++L G EVKSLRAG  N  DSYV  R+
Sbjct: 1   MSKKA---PGANVIAQNKKARHIYELSDNHEAGISLTGSEVKSLRAGHVNFRDSYVDFRN 57

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GEAFL G +I P   A  +   DP R RKLLL+  E+++L   V ++GYTVV   LY+  
Sbjct: 58  GEAFLVGLHIAPYDNAG-YAQHDPDRDRKLLLHAHEIENLARSVEQKGYTVVPTKLYFAR 116

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIM 155
              KV I V +GKK HD+R D+K R    D  R +
Sbjct: 117 GKVKVDIAVGRGKKLHDQREDLKRRAEDRDTQREL 151


>UniRef50_B0TLG2 SsrA-binding protein n=12 Tax=Proteobacteria RepID=SSRP_SHEHH
          Length = 164

 Score =  208 bits (530), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 95/161 (59%), Positives = 124/161 (77%), Gaps = 3/161 (1%)

Query: 1   MTKK--KAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLL 58
           M KK  K  K  SA+IA NKRA  +Y  EE+ EAGL+L GWEVKS+R GK N+S+SYV L
Sbjct: 1   MAKKNAKNSKNSSASIARNKRATFDYKFEEKLEAGLSLMGWEVKSIRMGKVNLSESYVFL 60

Query: 59  RDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW 118
           R+GEA+LFG  I P+  AS+HVVCDP R+RKLLL ++ELD L G V+R+GY++V +S+YW
Sbjct: 61  REGEAYLFGCTIAPLNTASSHVVCDPLRSRKLLLKRKELDKLQGLVDRKGYSIVPISMYW 120

Query: 119 KNA-WCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
           +   W K++IG+ KGKK+HDKR D K+REWQ++KAR +K A
Sbjct: 121 QKGAWVKIEIGLGKGKKEHDKRDDTKDREWQIEKARTIKKA 161


>UniRef50_C7M112 SsrA-binding protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331
           RepID=C7M112_ACIFD
          Length = 171

 Score =  208 bits (530), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 63/159 (39%), Positives = 96/159 (60%), Gaps = 1/159 (0%)

Query: 2   TKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDG 61
             K     G   +A N+RARH+Y + E FEAG+ L G EVK++R G   + D+Y  +RDG
Sbjct: 8   PAKAQQLGGVRVLAQNRRARHDYDVLETFEAGIVLVGSEVKAVREGHVQLRDAYARIRDG 67

Query: 62  EAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNA 121
           E FLF A I+P   A+        R RKLLL++ E+D L GR+ +E  T++ LSLY ++ 
Sbjct: 68  ELFLFQAVISPYRHATGFGTHVTDRPRKLLLHRDEIDRLRGRLEQERLTLIPLSLYLRDG 127

Query: 122 WCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
             KV++ +AKG+  +DKR  +  R+ Q +  R +++ +R
Sbjct: 128 LVKVELALAKGRTLYDKRHVLATRDAQREVER-LRSRYR 165


>UniRef50_Q4JX42 SsrA-binding protein n=87 Tax=Bacteria RepID=SSRP_CORJK
          Length = 184

 Score =  207 bits (528), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 62/151 (41%), Positives = 94/151 (62%), Gaps = 1/151 (0%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
           G   +A N++ARH+Y I + +E G+ L G EVKSLR GKA++ D+Y  + +GE +L G +
Sbjct: 31  GQIVVATNRKARHDYHIIDTYECGVVLVGTEVKSLREGKASLVDAYATIDEGEVWLRGLH 90

Query: 70  ITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGV 129
           I   ++        P RTRKLLL++RE+DSL G+V     T+V L LY+     KV++ +
Sbjct: 91  IPEYSMGH-WTNHSPRRTRKLLLHRREIDSLMGKVRDGNNTLVPLQLYFVAGKLKVELAL 149

Query: 130 AKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           A+GK+++DKR DIK R  + +  R M    +
Sbjct: 150 ARGKQEYDKRQDIKRRTEEREITREMGRRIK 180


>UniRef50_A1WPQ3 SsrA-binding protein n=5 Tax=Proteobacteria RepID=SSRP_VEREI
          Length = 157

 Score =  207 bits (527), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 81/160 (50%), Positives = 111/160 (69%), Gaps = 3/160 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           MTKK         IA NK+A H+YF+EE +EAG+ L GWEVK+LRAGKA ++D YVL+RD
Sbjct: 1   MTKKPDPASR---IADNKKAAHDYFLEERYEAGMVLHGWEVKALRAGKAQLTDGYVLIRD 57

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GE FL G  +  +  ASTHV  +  RT+KLLL + ++  L G+V ++GYT+V L+L+WKN
Sbjct: 58  GELFLLGCQLQALKTASTHVSPEAARTKKLLLKKDDIRRLIGKVEQKGYTLVPLNLHWKN 117

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
              K +I +A+GK QHDKR+ IKERE + +  R +K+  R
Sbjct: 118 GVVKCEIALARGKAQHDKRNSIKEREGKREVERALKSRSR 157


>UniRef50_Q03AJ7 SsrA-binding protein n=110 Tax=Bacteria RepID=SSRP_LACC3
          Length = 157

 Score =  207 bits (527), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 64/159 (40%), Positives = 98/159 (61%), Gaps = 2/159 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M KK   KP +  +A NK+A H+Y I + +EAG+AL G E+KS+R GK N+ D +  +R+
Sbjct: 1   MAKKHRQKPDN-LLAQNKKAGHDYNILDTYEAGIALTGTEIKSVRDGKLNLRDGFARIRN 59

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
            EA+L   +I+P    +     DP R RKLLL++RE+  L     R+G T+V L +Y K+
Sbjct: 60  NEAWLENVHISPYKEGNL-FNVDPMRNRKLLLHKREIRKLGQMTARQGVTLVPLRMYLKH 118

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
            + KV IGVA+GK  +DKR  +K ++ + +  R +K  +
Sbjct: 119 GYAKVLIGVAEGKHNYDKRETLKRKDQEREVQRALKARY 157


>UniRef50_B8H482 SsrA-binding protein n=83 Tax=Proteobacteria RepID=SSRP_CAUCN
          Length = 152

 Score =  206 bits (526), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 77/147 (52%), Positives = 99/147 (67%), Gaps = 2/147 (1%)

Query: 11  SATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI 70
           S  IA N+RAR +YFIEE FEAG+ L G EVKSLR G+ANI++SY  +   E  L  A+I
Sbjct: 2   SKPIAENRRARFDYFIEETFEAGIMLTGTEVKSLRTGRANIAESYASVEGREIVLINADI 61

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NAWCKVKIGV 129
            P   A+     +P R RKLLL++R++D L G V REG T+V + LYW      K+++G+
Sbjct: 62  PPYGHAN-RFNHEPRRHRKLLLHRRQIDKLIGAVQREGRTLVPIKLYWNDKGLAKLEVGL 120

Query: 130 AKGKKQHDKRSDIKEREWQVDKARIMK 156
           AKGKK HDKR    ER+WQ DKAR+MK
Sbjct: 121 AKGKKLHDKRDTAAERDWQRDKARLMK 147


>UniRef50_A1KN98 SsrA-binding protein n=62 Tax=Bacteria RepID=SSRP_MYCBP
          Length = 160

 Score =  206 bits (526), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 63/156 (40%), Positives = 98/156 (62%), Gaps = 1/156 (0%)

Query: 5   KAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAF 64
           K+ + G   +A N++ARH Y I E FEAG+ALQG EVKSLR G+A+++DS+  + DGE +
Sbjct: 3   KSSRGGRQIVASNRKARHNYSIIEVFEAGVALQGTEVKSLREGQASLADSFATIDDGEVW 62

Query: 65  LFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCK 124
           L  A+I      S     +P R RKLLL++R++D+L G++    + +V LSLY+     K
Sbjct: 63  LRNAHIPEYRHGS-WTNHEPRRNRKLLLHRRQIDTLVGKIREGNFALVPLSLYFAEGKVK 121

Query: 125 VKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           V++ +A+GK+  DKR D+  R+ Q +  R +    +
Sbjct: 122 VELALARGKQARDKRQDMARRDAQREVLRELGRRAK 157


>UniRef50_A8SP47 Putative uncharacterized protein n=2 Tax=Bacteria
           RepID=A8SP47_9FIRM
          Length = 156

 Score =  206 bits (525), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 66/155 (42%), Positives = 104/155 (67%), Gaps = 1/155 (0%)

Query: 6   AHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFL 65
           + + G+  IA NK+A HEYFIEE+FEAG+ L G EVKS+R G  +I +++V +  GE ++
Sbjct: 2   SKERGNTLIANNKKAYHEYFIEEKFEAGIELVGTEVKSIRQGHCSIKEAFVGIDHGEVYV 61

Query: 66  FGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKV 125
           +  N+ P    +     DP RTRKLLL++ E++ L G+   +GYT++ L +Y K+   K+
Sbjct: 62  YRMNVNPYERGNI-FNKDPLRTRKLLLHRYEINKLIGQQKVKGYTIMPLKVYIKDGLVKM 120

Query: 126 KIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           +IG+AKGKK +DKR DI +++ + +  R +KN +R
Sbjct: 121 EIGLAKGKKLYDKREDIAKKDMKREMERDLKNRNR 155


>UniRef50_Q1H274 SsrA-binding protein n=29 Tax=Bacteria RepID=SSRP_METFK
          Length = 154

 Score =  205 bits (523), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 69/148 (46%), Positives = 108/148 (72%)

Query: 13  TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
           +IA NK+A H+YFIEE++EAG+ L+GWEVK++R  +  + ++YV+++ GE +L G ++TP
Sbjct: 2   SIAQNKKAFHDYFIEEKYEAGIVLEGWEVKAIRENRVQLKEAYVIIQRGEIYLIGCHVTP 61

Query: 73  MAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKG 132
           +  ASTHV  D  RTRKLLL+  ++  L G+V R GYT+V L +++     KV+IG+AKG
Sbjct: 62  LGSASTHVRPDAIRTRKLLLHSEQIAKLIGKVERAGYTLVPLDMHYTRGRIKVQIGLAKG 121

Query: 133 KKQHDKRSDIKEREWQVDKARIMKNAHR 160
           KKQ+DKR   KE++W+ +++ +MK   +
Sbjct: 122 KKQYDKRHSEKEKDWKREQSSLMKKYVK 149


>UniRef50_Q2N9K0 SsrA-binding protein n=85 Tax=cellular organisms RepID=SSRP_ERYLH
          Length = 160

 Score =  205 bits (522), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 75/160 (46%), Positives = 110/160 (68%), Gaps = 3/160 (1%)

Query: 1   MTKKKAHK-PGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLR 59
           M + K        T+A N+RAR +Y +E++FEAG+ALQG EVK+LRAG+A+I++SY  +R
Sbjct: 1   MARPKPETFDKQKTVAENRRARFDYAVEDKFEAGIALQGTEVKALRAGEASIAESYAEVR 60

Query: 60  DGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK 119
           DGEA+L  ANI   +  +  +   P R RKLLL+ RE++ L G V R+G T+V LS+Y+ 
Sbjct: 61  DGEAWLINANIPEYSHGN-RLNHQPRRPRKLLLHNREIERLLGAVERKGMTLVPLSIYFN 119

Query: 120 -NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
                KV++ +AKG++  DKR  IK+R+W+ DKARIM++ 
Sbjct: 120 SRGRAKVELALAKGRQAQDKREYIKDRDWKRDKARIMRDK 159


>UniRef50_D1BK11 SsrA-binding protein n=20 Tax=Bacteria RepID=D1BK11_SANKS
          Length = 176

 Score =  203 bits (518), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 62/157 (39%), Positives = 98/157 (62%), Gaps = 1/157 (0%)

Query: 2   TKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDG 61
               +  P  A IA NK+ARH++ IE+ FEAG+ L G EVK+LRAG+A++ D YV +   
Sbjct: 18  KAPASSGPVRALIASNKKARHDFAIEDVFEAGMVLSGTEVKALRAGRASLVDGYVNIEGN 77

Query: 62  EAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNA 121
           EA+L GA+I+  A   T     P R RKLLL++ E++ L      +G+T+V L +Y+ + 
Sbjct: 78  EAWLEGAHISEYAH-GTWTNHAPRRKRKLLLHRSEIERLAQGTREKGFTIVPLQMYFLDG 136

Query: 122 WCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
             KV+I +A+GKK++DKR  ++E++   +  R ++  
Sbjct: 137 RAKVEIALARGKKEYDKRQTLREQQDNREAHRAIRQR 173


>UniRef50_B2V9T6 SsrA-binding protein n=7 Tax=Bacteria RepID=SSRP_SULSY
          Length = 152

 Score =  203 bits (518), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 64/151 (42%), Positives = 98/151 (64%), Gaps = 1/151 (0%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
               +A NK+A H+Y I E++EAG+ L G EVKSLR G  N+ DS+V++ DGEA+L+   
Sbjct: 2   SEKVVATNKKAFHDYAILEKYEAGIVLTGSEVKSLREGACNLKDSFVMIEDGEAWLYNCY 61

Query: 70  ITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGV 129
           I P   A+     DPTR RKLLL+++E+  L G+V  +G T+V L +Y+KN   KV+I +
Sbjct: 62  IAPYKPAAK-FGHDPTRKRKLLLHKKEILKLMGKVKEKGLTIVPLRVYFKNGKAKVEIAL 120

Query: 130 AKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           AKGK +++KR  +KE++ + +  +  K   +
Sbjct: 121 AKGKVKYEKREAMKEKDMKREIEKSFKGKIK 151


>UniRef50_C8PPG5 SsrA-binding protein n=1 Tax=Treponema vincentii ATCC 35580
           RepID=C8PPG5_9SPIO
          Length = 200

 Score =  203 bits (517), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 88/149 (59%), Gaps = 1/149 (0%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             IA NK+A  +Y IEE  E G+ALQG E+KS+R G+ +  DS+  +   E +L   +I+
Sbjct: 53  KIIAKNKKAHFDYSIEETIECGIALQGTEIKSVRDGRISFPDSFAEIIRNEVWLKNFHIS 112

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
               +S     DP R +KLLL++ E+  L  +   +GYT++ L  Y K    KV +G+ K
Sbjct: 113 EYVYSSI-FNHDPDRPKKLLLHKDEIKRLTRKTEEKGYTLIPLEFYLKRGRIKVMLGICK 171

Query: 132 GKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           GKKQ DKR+DIKER+ + D  R +   +R
Sbjct: 172 GKKQFDKRADIKERDIKRDMQRELHLKNR 200


>UniRef50_C4Z0S0 SsrA-binding protein n=22 Tax=Bacteria RepID=C4Z0S0_EUBE2
          Length = 164

 Score =  202 bits (515), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 1/155 (0%)

Query: 5   KAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAF 64
           K    G+  IA NK+A  +YFIEE++EAG+ L G EVKS+RAGK +I +SY+ + +GE +
Sbjct: 8   KTSASGNRLIANNKKAYFDYFIEEKYEAGMVLHGTEVKSIRAGKCSIKESYIKIENGEVY 67

Query: 65  LFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCK 124
           + G NITP    +     DP R +KLLL++ +++ L G +  +GYT+V L +Y K    K
Sbjct: 68  VLGMNITPYEKGNI-FNKDPLRPKKLLLHKNQINKLTGELTIKGYTLVPLQVYLKEGKVK 126

Query: 125 VKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
           ++IG+ KGKK  DKR  I +++   D  +  KN +
Sbjct: 127 MEIGLGKGKKNFDKRDSIAKKDQIRDAQKEFKNKN 161


>UniRef50_A0LGB7 SsrA-binding protein n=7 Tax=Bacteria RepID=SSRP_SYNFM
          Length = 161

 Score =  201 bits (511), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 68/161 (42%), Positives = 96/161 (59%), Gaps = 2/161 (1%)

Query: 1   MTKKK-AHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLR 59
           MTK K +    +  I  NK+A H+Y I E+FEAG+ L G EVKSLR G+AN+ DSY  +R
Sbjct: 1   MTKNKPSTAEKTRLICQNKKAYHDYDILEKFEAGIVLLGTEVKSLREGRANLKDSYARVR 60

Query: 60  DGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK 119
            GE FL G +I+P   AS +   +P R RKLLL+  E+  L G+    G  ++ L LY+ 
Sbjct: 61  KGEVFLQGLHISPYTHAS-YNNHEPERVRKLLLHAHEIKRLTGKTQERGLALIPLKLYFS 119

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
               KV++ +A+GKK +DKR  IK +E   +  R+ K   +
Sbjct: 120 KGKVKVELALAQGKKLYDKRESIKRKEENRELDRLRKRRRQ 160


>UniRef50_B2UY12 SsrA-binding protein n=24 Tax=Bacteria RepID=SSRP_CLOBA
          Length = 156

 Score =  201 bits (511), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 68/154 (44%), Positives = 99/154 (64%), Gaps = 1/154 (0%)

Query: 7   HKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLF 66
            K  S T+A N++ARHEYFIEE  EAG+AL G EVKS+R G+AN+ +SY  +R+GE F+ 
Sbjct: 3   RKKSSNTLAENRKARHEYFIEETIEAGIALVGTEVKSIRNGRANLKESYADIRNGEIFIL 62

Query: 67  GANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVK 126
             +I+P    +     +P R +KLLL++ E+  L G V+R+GYT++ L+LY K    KV 
Sbjct: 63  SMHISPYEQGNI-FNVEPLREKKLLLHKSEIHRLAGLVSRDGYTLIPLTLYLKAGKVKVA 121

Query: 127 IGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           +G+ KGKK +DKR  + E+    +  R +K   R
Sbjct: 122 LGICKGKKDYDKRDSMLEKAHNREMQRALKERSR 155


>UniRef50_A3ZLQ9 SsrA-binding protein n=2 Tax=Planctomycetaceae RepID=A3ZLQ9_9PLAN
          Length = 176

 Score =  199 bits (507), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 52/148 (35%), Positives = 85/148 (57%)

Query: 11  SATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI 70
              I  N++ARH+Y I +  E G+ L G EVK+LR GK ++ +++  +  GE FL    I
Sbjct: 28  ERPIGENRKARHDYEIIDTLECGIQLVGSEVKTLRDGKVSLGEAFARVLRGEVFLVNCEI 87

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVA 130
                 S  +   P R RKLLL + E+     +   +G ++V L +Y+K    KV +G+ 
Sbjct: 88  PEYRNTSMFLNHVPKRPRKLLLRKSEIVKFAAKSEDKGLSIVPLKMYFKRGLVKVLLGIG 147

Query: 131 KGKKQHDKRSDIKEREWQVDKARIMKNA 158
           +G+KQHDKR  +K+++ + D AR+M++ 
Sbjct: 148 RGRKQHDKRDKLKQQDAKRDIARVMRSR 175


>UniRef50_D2RBT7 SsrA-binding protein n=3 Tax=Bacteria RepID=D2RBT7_GARVA
          Length = 165

 Score =  198 bits (504), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 69/160 (43%), Positives = 103/160 (64%), Gaps = 3/160 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLL-R 59
           M  K A   G+ T+A N++A H+Y IE+ +EAGLAL G EVKSLR G+A++++S+V + R
Sbjct: 1   MANKPAQ-DGTVTVAQNRKAHHDYVIEDCYEAGLALTGTEVKSLREGRASLAESFVNIDR 59

Query: 60  DGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK 119
            GE +L GANI    +  T     P R RKLLL+  E+  L  +   +GYTVV L LY+K
Sbjct: 60  RGEMWLEGANIPEY-LNGTWNNHAPKRKRKLLLHAAEIAKLSRQTEAKGYTVVPLRLYFK 118

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
            ++ KV+I +A+GKK+ DKR  ++E + + +  R M+  +
Sbjct: 119 GSYVKVEIALARGKKEFDKRQALREEQDKREALREMRYRN 158


>UniRef50_B2S2D1 SsrA-binding protein n=2 Tax=Treponema pallidum RepID=SSRP_TREPS
          Length = 154

 Score =  198 bits (504), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 56/151 (37%), Positives = 86/151 (56%), Gaps = 1/151 (0%)

Query: 9   PGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGA 68
            G+  IA N++A   Y +E+  E G+AL+G EVKS+RAG  +  D++  +R GE +L   
Sbjct: 4   TGTHLIAKNRKAFFNYHVEDRLECGIALEGTEVKSVRAGHLSFPDAFAEMRGGELWLKNV 63

Query: 69  NITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIG 128
           +I     A +    +P R RKLL ++ ++  L  +V  +GYT+V L  Y K    KV +G
Sbjct: 64  HIAEYVHACS-FAPNPDRMRKLLAHRDQIARLKRKVEEKGYTLVPLEFYLKAGRVKVALG 122

Query: 129 VAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
           + KGKK  DKR+ IK R+   + +R +   H
Sbjct: 123 ICKGKKLFDKRAQIKARDNARELSRSLCERH 153


>UniRef50_A5EXZ5 SsrA-binding protein n=4 Tax=Proteobacteria RepID=SSRP_DICNV
          Length = 159

 Score =  197 bits (502), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 76/160 (47%), Positives = 113/160 (70%), Gaps = 3/160 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M+KK         I  NK+  H+YF+EE FEAG+AL+GWEVK++RAG+  I +SY+L++D
Sbjct: 1   MSKKNT---ADNHIVTNKKVFHDYFLEEHFEAGIALEGWEVKAVRAGRIQIKESYILVKD 57

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
            + +LFGA I P+A AS+H+  +  RTRKLLL++ ++  L G   R+GYT++ +SLYWKN
Sbjct: 58  QQVYLFGALIHPLASASSHIFPEAQRTRKLLLHRYQIAKLIGASERDGYTLMPVSLYWKN 117

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
            + KV + +AKGKK+ DKR   K+++W+  ++RIMK   R
Sbjct: 118 GFVKVDVAIAKGKKEFDKRQVKKDQDWKKTQSRIMKAHKR 157


>UniRef50_C0QVL0 SsrA-binding protein n=2 Tax=Brachyspira RepID=C0QVL0_BRAHW
          Length = 161

 Score =  196 bits (500), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 65/161 (40%), Positives = 92/161 (57%), Gaps = 6/161 (3%)

Query: 1   MTKKKAHKPGSATI-----ALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSY 55
           M  KK  K GS TI       NK+A   Y + E+FEAG+ L G EVKSLR    N+SDSY
Sbjct: 1   MASKKDKKSGSNTISSGEIVKNKKALFNYELVEKFEAGIVLLGTEVKSLRERSVNMSDSY 60

Query: 56  VLLRDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALS 115
              + GE F+   +I+P    +     +P R RKLL+ +REL  LYG++  +G T++ + 
Sbjct: 61  ASFKKGELFIVNMHISPYHFGN-RNNHEPLRERKLLMKKRELRRLYGKIKEQGLTLIPVK 119

Query: 116 LYWKNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMK 156
           LY+     KV++ +AKGKK HDKR  +K +    +  R +K
Sbjct: 120 LYFSRGKVKVELALAKGKKLHDKRETLKRKTLDREMERYIK 160


>UniRef50_C1F4B8 SsrA-binding protein n=1 Tax=Acidobacterium capsulatum ATCC 51196
           RepID=C1F4B8_ACIC5
          Length = 176

 Score =  196 bits (500), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 67/162 (41%), Positives = 101/162 (62%), Gaps = 4/162 (2%)

Query: 2   TKKKAHKP---GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLL 58
            K K   P   G    A N+ A H YF+ E++EAG+AL+G EVKS+R GKAN+ D+Y L+
Sbjct: 15  AKPKPRDPVAAGERDAAQNRAASHNYFLLEKYEAGVALRGTEVKSIREGKANLKDAYGLI 74

Query: 59  RDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW 118
           +DGEAFL  A+I P +  + +   +  RTRKLLLNQ EL  L+G+  ++G+T++   LY+
Sbjct: 75  KDGEAFLLNAHIGPYSHGN-YTNHEALRTRKLLLNQTELKKLWGKTQQKGFTLIPTRLYF 133

Query: 119 KNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           +N   K ++ VAKGK+  DKR   ++RE   +    +  + +
Sbjct: 134 RNGRVKCELAVAKGKQDWDKRETERKREADREARAAIDRSKK 175


>UniRef50_D1U5X0 SsrA-binding protein n=2 Tax=Desulfovibrio RepID=D1U5X0_9DELT
          Length = 158

 Score =  196 bits (499), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 65/157 (41%), Positives = 91/157 (57%), Gaps = 1/157 (0%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M KKK+      TI  NK+AR  Y I E FEAG++L G EVKSLR G     D YV  RD
Sbjct: 1   MAKKKSTTT-PDTIGTNKQARRLYDILETFEAGISLLGSEVKSLRGGHVAFKDGYVQFRD 59

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
             AFL G +I P      +   DP R R+LLL++RE+  L  + +++G TV+ + +Y+  
Sbjct: 60  HSAFLVGVHIAPYEKTGEYDQHDPERPRQLLLHKREILVLKAKSDQKGLTVIPMKMYFSR 119

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKN 157
              KV IG+ KGK  H ++ D+K+R+   D AR + +
Sbjct: 120 GKIKVLIGLGKGKNVHSRKQDLKDRDIARDTARQLAD 156


>UniRef50_Q3ZZ31 SsrA-binding protein n=6 Tax=Bacteria RepID=SSRP_DEHSC
          Length = 172

 Score =  196 bits (498), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 56/153 (36%), Positives = 96/153 (62%), Gaps = 1/153 (0%)

Query: 7   HKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLF 66
           H     T+  N++A H YF+EE++EAG+ L G E+KSLR+G+ N+ D+YV  + GE +L 
Sbjct: 18  HMAEYVTLTTNRKAFHNYFLEEKYEAGIMLLGTEIKSLRSGRVNMGDAYVKPQRGELWLV 77

Query: 67  GANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVK 126
            A+I+     S H   +P R RKLL++++E+  L  +V  +G T++ + +Y KN   KV+
Sbjct: 78  NAHISAYE-CSGHTSHEPMRERKLLMHRKEIALLMSKVKEKGLTLIPVRIYLKNDIAKVE 136

Query: 127 IGVAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
           + + +GKK +DKR  + +R+ + +  R +K  +
Sbjct: 137 LSLGRGKKLYDKRDTVTKRDTERELEREVKYRN 169


>UniRef50_D2R3D1 SsrA-binding protein n=1 Tax=Pirellula staleyi DSM 6068
           RepID=D2R3D1_9PLAN
          Length = 179

 Score =  195 bits (497), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 54/151 (35%), Positives = 88/151 (58%), Gaps = 2/151 (1%)

Query: 9   PGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGA 68
           P    +A N++AR  Y I +  E G+ L G EVKSLR GK ++ ++Y  ++DG+ +L GA
Sbjct: 29  PPVTLVAENRKARFNYEILDSLECGIQLVGSEVKSLRDGKLSLDEAYARIKDGDVWLVGA 88

Query: 69  NITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-KNAWCKVKI 127
           +I     AS      P R RKLL++++++    G  + +G T+V L +Y+ +    KV I
Sbjct: 89  DIAEYKQASIW-NHAPKRPRKLLMHKQQMRKFAGTSHDKGLTLVPLKVYFTERGIAKVVI 147

Query: 128 GVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
           G+ +GKK HDKR  +K+ + + D +R  +  
Sbjct: 148 GLCRGKKLHDKRETLKKNDAKRDISRAFRKK 178


>UniRef50_A7HGZ0 SsrA-binding protein n=8 Tax=Bacteria RepID=SSRP_ANADF
          Length = 165

 Score =  195 bits (496), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 66/149 (44%), Positives = 92/149 (61%), Gaps = 1/149 (0%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             +A N+RAR ++ IE+ +EAGL L G EVKSLR G  N+SD+Y L R  E FL    I 
Sbjct: 18  KIVATNRRARFDFTIEDSWEAGLVLTGSEVKSLREGNVNLSDAYALPRGDELFLVNCRIG 77

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
               A+ H   +P R RKLL+N+ ELD + G++ + GYT+V L LY+K  W KV++G+AK
Sbjct: 78  EYKQAA-HFGHEPLRDRKLLMNRPELDRVKGKIEQRGYTLVPLRLYFKQGWAKVELGLAK 136

Query: 132 GKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           G+   D+R  I ERE + +  R +    R
Sbjct: 137 GRSHEDRRHAIAERETKREMDREISRRRR 165


>UniRef50_Q7UZP2 SsrA-binding protein n=33 Tax=cellular organisms RepID=SSRP_PROMP
          Length = 175

 Score =  195 bits (496), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 57/143 (39%), Positives = 84/143 (58%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           ++ N+ A+ +Y I E  EAG+ L G EVKS+R G  N+ D Y   RDGE  L   +I+P 
Sbjct: 32  LSENRYAKFQYEILETIEAGIELLGTEVKSIRNGSVNLRDGYCSFRDGEILLLNVHISPH 91

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGK 133
                    DP R RKLLL+++E+  L     ++G T++ LS+Y K +W K+ IG+ KGK
Sbjct: 92  KNVGPFFNHDPLRNRKLLLHKKEIVKLKYNTEKKGLTIIPLSIYLKGSWIKLTIGIGKGK 151

Query: 134 KQHDKRSDIKEREWQVDKARIMK 156
           K HDKR   K+R+ + +    +K
Sbjct: 152 KLHDKRQADKQRDIKREIKTALK 174


>UniRef50_A9NF97 SsrA-binding protein n=1 Tax=Acholeplasma laidlawii PG-8A
           RepID=SSRP_ACHLI
          Length = 149

 Score =  194 bits (495), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 66/149 (44%), Positives = 95/149 (63%), Gaps = 1/149 (0%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             I  NK+A  EYFIE++F AG+ LQG EVKS+RAGK +I+++Y+  R+GE F+   +I 
Sbjct: 2   KIITQNKKAHFEYFIEQKFVAGIKLQGSEVKSIRAGKCSINEAYITFRNGEVFILNMHIA 61

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
               AS+    + TRTRKLLLN+ E+D L G   R+G T++ L++       KV I +AK
Sbjct: 62  KFD-ASSIFNHEETRTRKLLLNRSEIDKLMGAQTRDGMTIIPLTVELHEGLIKVVIALAK 120

Query: 132 GKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           GKK  DKR  IKER+ + ++ + +K   R
Sbjct: 121 GKKLFDKRETIKERDIKREQQQSLKGKMR 149


>UniRef50_Q2GCW3 SsrA-binding protein n=2 Tax=Neorickettsia RepID=SSRP_NEOSM
          Length = 147

 Score =  192 bits (490), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 63/143 (44%), Positives = 95/143 (66%), Gaps = 2/143 (1%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             IA+NK+AR +Y + +EFEAG+ L G EVK+L+   A++++++V  R  E +L   ++ 
Sbjct: 2   KVIAINKKARFDYSLIDEFEAGIVLLGTEVKALKYHSASLNEAFVAFRRFELWLNNMHVP 61

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NAWCKVKIGVA 130
           P   AS      PTR+RKLL+++R+L+ + G V  +G T+V LS+Y   N   KVK  +A
Sbjct: 62  PYKPAS-RFNHVPTRSRKLLVHKRQLNKISGAVRTKGLTLVPLSIYVNENGLIKVKFALA 120

Query: 131 KGKKQHDKRSDIKEREWQVDKAR 153
           KGKK+HDKR DIK+R+W   +AR
Sbjct: 121 KGKKKHDKRQDIKDRDWARKQAR 143


>UniRef50_Q1GDQ2 SsrA-binding protein n=12 Tax=Rhodobacterales RepID=SSRP_SILST
          Length = 158

 Score =  192 bits (489), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 67/158 (42%), Positives = 98/158 (62%), Gaps = 3/158 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M K+K   P    IA N+RAR +Y IE++ E G+ L+G EVKSLRAG +NI++SY  + +
Sbjct: 1   MAKQKTD-PNYKVIAENRRARFDYAIEQDLECGIMLEGSEVKSLRAGGSNIAESYAAVEE 59

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK- 119
           GE +L  + I P   A      +  R RKLL++++E+  L+    R+G T+V L LY+  
Sbjct: 60  GELWLVNSYIAPYEQAKV-FKHEERRRRKLLVSRKEMADLWNATQRKGMTLVPLVLYFNH 118

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKN 157
               K+KIG+AKGKK HDKR    +R+W   K R++K+
Sbjct: 119 RGMAKIKIGIAKGKKNHDKREAQAKRDWSRQKQRLLKD 156


>UniRef50_A9G109 SsrA-binding protein n=1 Tax=Sorangium cellulosum 'So ce 56'
           RepID=SSRP_SORC5
          Length = 162

 Score =  192 bits (488), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 71/160 (44%), Positives = 102/160 (63%), Gaps = 3/160 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M K+KA +PG   IA NKRA   Y + + FEAG+ L+G EVK LRAGKA+++DS+  +  
Sbjct: 1   MPKEKA-RPGETLIARNKRAGFNYDLGDRFEAGIVLKGSEVKMLRAGKADLTDSFCTVLR 59

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GE FL G +I  MA A+      P   RKLLL++RE++ +   + REG T VA  LY+K+
Sbjct: 60  GEVFLHGVSIAAMASAA--FGHVPKGARKLLLHRREIERIDLSIAREGMTAVATRLYFKS 117

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
              KV+I +A+GKK HDKR  IKE++ + +   ++ +  R
Sbjct: 118 GLAKVEIALARGKKSHDKRETIKEQDAEREMRAVVVHGQR 157


>UniRef50_Q04E23 SsrA-binding protein n=4 Tax=Lactobacillales RepID=SSRP_OENOB
          Length = 155

 Score =  191 bits (487), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 66/159 (41%), Positives = 97/159 (61%), Gaps = 4/159 (2%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M KK  H      +A N+RA   YFI E +EAG+ L G E+KS+R G+  I D+Y+ +RD
Sbjct: 1   MAKKDKH---DDALARNRRASFNYFIGETYEAGIQLTGTEIKSVRLGQITIGDAYITVRD 57

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
            +AFL  ANI+P    +     DP R RKLLL+++E+ +L   V++EG T+V L +Y   
Sbjct: 58  QQAFLNNANISPYKQGN-QFNVDPLRRRKLLLHKKEILALDRAVSKEGKTIVPLRVYIVK 116

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
            + K+ I +  GKK +DKR  IKER+ + +  + +KN H
Sbjct: 117 GFAKILIAIGTGKKNYDKRQTIKERDLKRELGKNLKNFH 155


>UniRef50_Q7UH38 SsrA-binding protein n=1 Tax=Rhodopirellula baltica
           RepID=SSRP_RHOBA
          Length = 176

 Score =  191 bits (487), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 54/153 (35%), Positives = 86/153 (56%), Gaps = 2/153 (1%)

Query: 7   HKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLF 66
           ++P    +A N++A+  Y I +  E G+ L G EVKS+R GK ++ ++++ + +GE +L 
Sbjct: 25  NQPNITPVAENRKAKFRYEILDSVECGMMLMGSEVKSMREGKLSLDEAHIRVTNGELWLV 84

Query: 67  GANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-KNAWCKV 125
           G++I     A      DP R RKLL++ +E D   GR    G T++ L +Y+ +    K 
Sbjct: 85  GSDIAHYNNAGMW-NHDPRRPRKLLVHAKEFDKFAGRAFERGLTLIPLRVYFSERGLAKC 143

Query: 126 KIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
            +G+ KGKK HDKR  IK+RE      R M+  
Sbjct: 144 VMGLVKGKKLHDKRETIKKRESDRGLQRAMRRK 176


>UniRef50_A6G542 SsrA-binding protein n=2 Tax=Proteobacteria RepID=A6G542_9DELT
          Length = 159

 Score =  191 bits (486), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 62/148 (41%), Positives = 91/148 (61%), Gaps = 1/148 (0%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
           G   +  N++A H+Y I EE E+G+ALQG EVKS+R G+ ++ ++Y   R  E FL  A+
Sbjct: 11  GDEVLEENRKATHDYEILEELESGVALQGSEVKSIRDGRISLKEAYCQFRGDELFLLQAH 70

Query: 70  ITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGV 129
           I     A       P R RKLLL++RELD L+  V  +G T+V L +Y K+   K+ IG+
Sbjct: 71  IAEFPQAHAR-NHPPLRARKLLLHRRELDKLHDAVKTQGLTIVPLVVYLKSRRIKILIGL 129

Query: 130 AKGKKQHDKRSDIKEREWQVDKARIMKN 157
            +GKK HDKR+ IKER+ + +  R ++ 
Sbjct: 130 GRGKKVHDKRAAIKERDQKREMQRALRE 157


>UniRef50_Q1MRU5 SsrA-binding protein n=5 Tax=Desulfovibrionales RepID=SSRP_LAWIP
          Length = 155

 Score =  191 bits (486), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 63/154 (40%), Positives = 97/154 (62%), Gaps = 1/154 (0%)

Query: 6   AHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFL 65
           + K  S  +  N++ARH Y + +  EAG+ L G EVKSLR+G A+  DSYV  + GE ++
Sbjct: 2   SAKKNSHLVFENRKARHLYDLLDFLEAGIVLTGPEVKSLRSGHASFQDSYVDFKQGEGYI 61

Query: 66  FGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKV 125
            G +I P   A  +V+ +P R RKLLL+++EL  L  +V ++G T+V L LY+KN   K 
Sbjct: 62  VGLHIPPYNNAG-YVIQNPDRPRKLLLHRQELKMLASKVEQKGLTIVPLKLYFKNRKVKT 120

Query: 126 KIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
           +I +AKG+K +D R+++K+R   +D  R +   H
Sbjct: 121 EIALAKGRKLYDHRNELKKRAEAMDIKRELAARH 154


>UniRef50_C1ZDG5 SsrA-binding protein n=1 Tax=Planctomyces limnophilus DSM 3776
           RepID=C1ZDG5_PLALI
          Length = 160

 Score =  190 bits (483), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 58/155 (37%), Positives = 98/155 (63%), Gaps = 1/155 (0%)

Query: 2   TKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDG 61
           +K +  KP + ++  N+RARHEY + ++ + G+ L G EVKS+RAGK +I +++V ++DG
Sbjct: 5   SKPEDDKPNNISVCRNRRARHEYELMDQLDCGIVLMGSEVKSIRAGKVSIEEAWVRVQDG 64

Query: 62  EAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNA 121
           E +L G +I     AS  +  +  RTRKLL ++REL    GR +    T+V L +Y +  
Sbjct: 65  ELYLVGCDINEYPQAS-WLNHETKRTRKLLAHRRELKKFCGRTSERSITIVPLEMYLQRG 123

Query: 122 WCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMK 156
           + K+KI +AKG+K HDKR  +K ++ + +  ++ +
Sbjct: 124 FVKIKIALAKGRKLHDKREKLKAQDARREIRQVTR 158


>UniRef50_D2PSC9 SsrA-binding protein n=1 Tax=Kribbella flavida DSM 17836
           RepID=D2PSC9_9ACTO
          Length = 173

 Score =  189 bits (482), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 55/155 (35%), Positives = 88/155 (56%), Gaps = 1/155 (0%)

Query: 6   AHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFL 65
                   IA N++A H+Y + E +EAG+ LQG EVK+LRAG+A++   +  + + E +L
Sbjct: 16  KKPEADPVIARNRKAAHDYHLGESWEAGMVLQGAEVKALRAGRASLVGGFATVEEREIWL 75

Query: 66  FGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKV 125
            G +I   + A         R RKLLL++ ++D +  +VN  G T+V + LY+K+   KV
Sbjct: 76  HGVHIPQYSQAR-WFNDGSRRKRKLLLHRAQIDKIERKVNESGLTIVPVLLYFKDGRAKV 134

Query: 126 KIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           +I +A+GKK  DKR  + ERE   +  R +    +
Sbjct: 135 EIALARGKKTWDKRHALAEREATREAERAVSRRLK 169


>UniRef50_Q1IQ53 SsrA-binding protein n=1 Tax=Candidatus Koribacter versatilis
           Ellin345 RepID=SSRP_ACIBL
          Length = 175

 Score =  189 bits (482), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 57/159 (35%), Positives = 95/159 (59%), Gaps = 1/159 (0%)

Query: 2   TKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDG 61
            K+     G    ++N+ A H YF+ +++EAG+AL+G EVKS+R G+AN+ D+Y L+++ 
Sbjct: 17  AKRDPVASGERDASVNRAASHNYFLLDKYEAGVALRGTEVKSIRDGRANLKDAYGLVKEN 76

Query: 62  EAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNA 121
           E +L  A+I P   AS +    P RTRKLL+ +RE+  L     ++G+T++   +Y+KN 
Sbjct: 77  ELWLINAHIGPYDAAS-YNNHAPLRTRKLLVKKREILKLLAASQQKGHTLIPTRMYFKNG 135

Query: 122 WCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
             KV++ VAKGK+  DKR   + +    D    +  + +
Sbjct: 136 RVKVELAVAKGKQLWDKRETDRRKTADRDAREAIARSRK 174


>UniRef50_B2KCF8 SsrA-binding protein n=1 Tax=Elusimicrobium minutum Pei191
           RepID=SSRP_ELUMP
          Length = 157

 Score =  189 bits (481), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 57/160 (35%), Positives = 95/160 (59%), Gaps = 4/160 (2%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M KK     G    A N++A H Y I + +EAG+ L G EVKS+R  + ++  ++V +  
Sbjct: 1   MAKKDN---GPLVAATNRKAYHNYHILDTYEAGIELLGSEVKSIRKKEVSLDGAFVRIEG 57

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
            +A++F  +I P    +T    +P R R+LLLN++E++ L G    +G+T++ L +Y+KN
Sbjct: 58  MQAYVFNMHINPYKY-NTVTEVEPLRQRRLLLNKKEINKLKGHAEIKGHTIIPLEVYFKN 116

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
            W K+K+G+ KGK+  DKR  IK+R+   +  +  KN  +
Sbjct: 117 GWAKIKVGLGKGKQLFDKRDAIKKRDLSREMEKDFKNKIK 156


>UniRef50_Q9Z8K1 SsrA-binding protein n=2 Tax=Chlamydophila pneumoniae
           RepID=SSRP_CHLPN
          Length = 151

 Score =  188 bits (479), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 55/146 (37%), Positives = 86/146 (58%), Gaps = 1/146 (0%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           I  N++A   Y + E  EAG+ L G E+KSLR    N+ D+YV++  GE +L  A+I P 
Sbjct: 6   IVSNRKALRNYEVIETLEAGIVLTGTEIKSLRDHGGNLGDAYVIVSKGEGWLLNASIAPY 65

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGK 133
              + +   +  R RKLLL++ EL  L G++ ++G T++ L ++    + KV++G  +GK
Sbjct: 66  RFGNIY-NHEERRKRKLLLHRYELRKLEGKIAQKGMTLIPLGMFLSRGYVKVRLGCCRGK 124

Query: 134 KQHDKRSDIKEREWQVDKARIMKNAH 159
           K +DKR  I ERE + + A  MK  H
Sbjct: 125 KAYDKRRTIIEREKEREVAAAMKRRH 150


>UniRef50_Q254F5 SsrA-binding protein n=1 Tax=Chlamydophila felis Fe/C-56
           RepID=SSRP_CHLFF
          Length = 150

 Score =  188 bits (479), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 84/149 (56%), Gaps = 1/149 (0%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
            S  I  N++A   Y + +  +AG+ L G E+KSLR    N+ D+YV +  GEA+L  A+
Sbjct: 2   SSKEIVSNRKALRNYEVLDTVDAGVVLTGTEIKSLRDHGGNLGDAYVTISKGEAWLLNAS 61

Query: 70  ITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGV 129
           I P    + +   +  R RKLLL++ E+  L  +V+++G T++ L ++    + K+++G 
Sbjct: 62  IAPYRFGNIY-NHEERRKRKLLLHRYEIQKLESKVSQKGITIIPLGMFLSRGYVKIRLGC 120

Query: 130 AKGKKQHDKRSDIKEREWQVDKARIMKNA 158
            +GKK HDKR  I  RE Q +    MK  
Sbjct: 121 CRGKKAHDKRQTIIAREKQREVESAMKRY 149


>UniRef50_B2ULK9 SsrA-binding protein n=3 Tax=Verrucomicrobia RepID=B2ULK9_AKKM8
          Length = 152

 Score =  188 bits (478), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 59/150 (39%), Positives = 93/150 (62%)

Query: 11  SATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI 70
           S+ I+ NK+AR +Y I + +E G+ L+G EVKS+RAGK NI+DS+  + +G+  L+G +I
Sbjct: 2   SSDISTNKKARRDYEILDTYECGMELKGTEVKSIRAGKVNIADSFARVENGQMLLYGCDI 61

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVA 130
            P   A         R R+LLL++RE+  L  + +++G ++VAL LYWKN   K+ +G+ 
Sbjct: 62  QPWETAGEFFQHQARRPRRLLLHKREIFKLEQQTSQKGCSLVALKLYWKNGKVKLALGLG 121

Query: 131 KGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           KGK   D+R D+K R    +  R +   +R
Sbjct: 122 KGKTHRDQRYDLKARVEMREAQREVARINR 151


>UniRef50_Q2S237 SsrA-binding protein n=1 Tax=Salinibacter ruber DSM 13855
           RepID=SSRP_SALRD
          Length = 154

 Score =  188 bits (478), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 62/136 (45%), Positives = 89/136 (65%), Gaps = 2/136 (1%)

Query: 9   PGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLL-RDGEAFLFG 67
            G+  +A NK+A+ EY IEE  EAGL L+G EVKS+R GKA++  +Y  + R+GE  + G
Sbjct: 3   EGTEVVARNKKAQFEYDIEETLEAGLVLEGSEVKSVRQGKASLDGAYCQVDREGEMKIHG 62

Query: 68  ANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKI 127
             I P   A      +P R RKLLL+ +++        +EGYT+V LSLY+++ W K+KI
Sbjct: 63  MYIKPYEEAGP-FGHEPRRNRKLLLHDQQIGKWGQMAEQEGYTIVPLSLYFRDGWAKLKI 121

Query: 128 GVAKGKKQHDKRSDIK 143
           G+AKG+++HDKR  IK
Sbjct: 122 GIAKGRQKHDKRQAIK 137


>UniRef50_A5FZS6 SsrA-binding protein n=11 Tax=Alphaproteobacteria RepID=SSRP_ACICJ
          Length = 159

 Score =  187 bits (477), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 66/160 (41%), Positives = 97/160 (60%), Gaps = 3/160 (1%)

Query: 1   MTKKKAHKPGSATIA-LNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLR 59
           M + +     S  IA  N++AR  Y I++  EAG+ L+G EVKSLR G+A +S+++   R
Sbjct: 1   MAEPRKSGLISHGIAAQNRKARFNYTIKDTVEAGIVLRGAEVKSLRMGRATLSEAFAGER 60

Query: 60  DGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK 119
           DGE +LF   I            D    RKLLL ++++D L G + R+G TVV L +++ 
Sbjct: 61  DGEMYLFNMYIPEY-QGGVLSRFDTKGPRKLLLKRKQIDQLLGAIARQGSTVVPLDVHFN 119

Query: 120 -NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
                KV +G+A+G+KQHDKR  I +R+W+ DKARI+KN 
Sbjct: 120 PRGLAKVTLGIAEGRKQHDKRQAIAKRDWERDKARILKNR 159


>UniRef50_D1NAK5 SsrA-binding protein n=1 Tax=Victivallis vadensis ATCC BAA-548
           RepID=D1NAK5_9BACT
          Length = 153

 Score =  185 bits (472), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 49/153 (32%), Positives = 78/153 (50%), Gaps = 1/153 (0%)

Query: 4   KKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEA 63
                P    +A NK+A H Y I E FEAG+ L G EVKS R     +++ YV + +G+A
Sbjct: 1   MPRQTPADPVLATNKKAFHNYHIIERFEAGVELVGTEVKSCRDRAIVMNEGYVTINNGQA 60

Query: 64  FLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWC 123
           +L   +I      +       T+ R+LLL+  E+  L   + ++G T+V L  Y K    
Sbjct: 61  WLLNVHIAVYGFGN-RFNHVATQKRRLLLHHNEILKLAQWLGQKGGTIVPLKFYLKKGLV 119

Query: 124 KVKIGVAKGKKQHDKRSDIKEREWQVDKARIMK 156
           KV+I   +GK   D+R  ++ R+  ++  R +K
Sbjct: 120 KVEIAYCQGKTHGDQRETLRRRQSDLEMRRAVK 152


>UniRef50_C7JH78 Trans-translation helper factor SmpB n=8 Tax=Acetobacter
           pasteurianus RepID=C7JH78_ACEP3
          Length = 168

 Score =  185 bits (472), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 58/152 (38%), Positives = 90/152 (59%), Gaps = 2/152 (1%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
               +A N++AR  Y I E  EAGL L+G EVKSLR G+A I++++   RDG  +LF + 
Sbjct: 15  SHGMVAQNRKARFNYNILETIEAGLVLKGAEVKSLRLGRATINEAFAGERDGALWLFNSY 74

Query: 70  ITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NAWCKVKIG 128
           I            D    RKLL++++E+    G + ++G T+V L++++      KV +G
Sbjct: 75  IPEY-QGGVLSRFDTRAPRKLLMHRKEMRKFIGAIAKQGATLVPLNVHFNDRGLAKVTLG 133

Query: 129 VAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           +  GKK HDKR  I +R+WQ DKAR+++N  +
Sbjct: 134 LGVGKKSHDKRQSIADRDWQRDKARLIRNKGK 165


>UniRef50_C9LGK2 SsrA-binding protein n=8 Tax=Prevotella RepID=C9LGK2_9BACT
          Length = 159

 Score =  184 bits (469), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 57/157 (36%), Positives = 89/157 (56%), Gaps = 3/157 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M K    KP    I  NKRA H+YF+ +   AG+ L G E+KS+R GKA + D++  + +
Sbjct: 1   MAKNNKLKPARINI-KNKRAEHDYFVIDRLTAGIVLTGTEIKSIRLGKAGLVDTFCFINN 59

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-K 119
           GE ++    +   +  S +   +  R RKLLLN++E+          G T+V L LY  +
Sbjct: 60  GEMWVKNMYVAEYSFGS-YNRHELRRDRKLLLNKKEIRHWASETKSPGLTIVPLRLYIDE 118

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMK 156
           N   K+ IG+ +GKK++DKR+ IKE+E + +  R+ K
Sbjct: 119 NGRAKLDIGLCRGKKEYDKRATIKEKESRREIERVTK 155


>UniRef50_C2D8P0 TmRNA-binding protein n=2 Tax=Coriobacteriaceae RepID=C2D8P0_9ACTN
          Length = 172

 Score =  184 bits (469), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 52/159 (32%), Positives = 89/159 (55%), Gaps = 2/159 (1%)

Query: 3   KKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGE 62
           K    +     IA N+ A H+Y ++   EAG+ L G EVKSLR     ++D + ++R+ E
Sbjct: 11  KGARKQATFHLIAKNRSAYHDYDLDNAEEAGIELTGVEVKSLRERSCQLTDCFCIVRNNE 70

Query: 63  AFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NA 121
            +L G +I P +        DP R R+LL++++++ S+  RV  +G ++V L +Y+    
Sbjct: 71  LYLVGLHIHPYSHGGVW-NIDPDRRRRLLMHKKQILSIARRVQTKGVSLVPLEIYFNERN 129

Query: 122 WCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
             KVK+ V +GKK +DKR+   +R+   +  R++K   R
Sbjct: 130 RVKVKVAVGRGKKMYDKRAAAAKRDSDREIQRVLKARTR 168


>UniRef50_A9BF44 SsrA-binding protein n=3 Tax=Bacteria RepID=SSRP_PETMO
          Length = 150

 Score =  184 bits (469), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 64/146 (43%), Positives = 92/146 (63%), Gaps = 2/146 (1%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
            T+A NK+A H+Y I E FEAG++L G EVKS +AGK N  DS+  +  GE  L+  +I+
Sbjct: 2   TTLARNKKATHDYEIIETFEAGISLLGTEVKSSKAGKINFKDSFCKIEKGELILYNVHIS 61

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN-AWCKVKIGVA 130
           P + AS     DP R RKLLL+++E+  L  +V +EG T++ L +Y  N    KVKI +A
Sbjct: 62  PYSGASI-FNHDPERPRKLLLHKKEIRRLQSKVQQEGLTMIPLEIYTNNKGLIKVKIALA 120

Query: 131 KGKKQHDKRSDIKEREWQVDKARIMK 156
           KG K++DKR  I E+E++    +  K
Sbjct: 121 KGLKKYDKREKIAEKEYERRIRKQQK 146


>UniRef50_C6HYH8 SsrA-binding protein n=1 Tax=Leptospirillum ferrodiazotrophum
           RepID=C6HYH8_9BACT
          Length = 170

 Score =  184 bits (467), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 56/165 (33%), Positives = 90/165 (54%), Gaps = 6/165 (3%)

Query: 1   MTKKKAHK----PGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYV 56
           M  KK  +      +  ++ N++A   Y + E FEAG+ L G EVK++R G  N+ D++V
Sbjct: 1   MAGKKKDEREADEKARAVSTNRKALFRYEVIERFEAGIVLWGTEVKAIREGSVNLGDAFV 60

Query: 57  LLRDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSL 116
                E++L+  ++ P          DP R RKLLL+++E+  L+G   ++G TVV L +
Sbjct: 61  RFEKEESWLYQMHVGPYR-GGNRENHDPLRVRKLLLHRKEILRLFGLTLQKGLTVVPLGI 119

Query: 117 YWKNA-WCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           Y  N    KV + + KGK Q DKR  IK RE   + +R+ ++  +
Sbjct: 120 YSNNRKKFKVTLALVKGKTQGDKREAIKRREADREISRVFRSNQK 164


>UniRef50_A6DIW5 SsrA-binding protein n=2 Tax=Bacteria RepID=A6DIW5_9BACT
          Length = 147

 Score =  183 bits (466), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 55/145 (37%), Positives = 88/145 (60%), Gaps = 2/145 (1%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           IA N++AR  Y I E++EAG+ LQG EVKS R    +I++++V    GEA++  ++I+P 
Sbjct: 3   IATNRKARFNYEIIEKYEAGVELQGTEVKSCRNKSISIAEAFVAFESGEAWMRESHISPY 62

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGK 133
              +     +P R R+LLL++RE+  L   V ++G +V+ LS++ K    K+ IG+ +GK
Sbjct: 63  EQGN-RNNHEPKRKRRLLLHKREIRKLMREVEQKGLSVIPLSVHLKRGKIKISIGLCRGK 121

Query: 134 KQHDKRSDIKEREWQVDKARIMKNA 158
              DKR  IK+R+      R +KN 
Sbjct: 122 NTVDKRDSIKKRDNDRALQR-LKNK 145


>UniRef50_Q6MAG8 SsrA-binding protein n=4 Tax=Chlamydiales RepID=SSRP_PARUW
          Length = 153

 Score =  183 bits (465), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 56/142 (39%), Positives = 84/142 (59%), Gaps = 1/142 (0%)

Query: 8   KPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFG 67
           K   + +  N+RA H+Y I E FE G+ LQG E+KS+R   A + D+YV +   E +L G
Sbjct: 2   KDKHSDLVSNRRATHDYEILETFETGIVLQGTEIKSIRDHGATLQDAYVKVIHNELWLIG 61

Query: 68  ANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKI 127
            NI      + H   +  R RKLL+++RE+    G +  +G  ++ L+LY K    KV+I
Sbjct: 62  CNIAHYRFGNIH-NHEEKRDRKLLMHKREIKKCKGAIQEKGLALIPLALYLKQGRIKVRI 120

Query: 128 GVAKGKKQHDKRSDIKEREWQV 149
            +AKGKK  DKR+D+KER+ + 
Sbjct: 121 AIAKGKKSFDKRADLKERDDKR 142


>UniRef50_A0FD64 TmRNA-binding protein n=1 Tax=Coxiella endosymbiont of Amblyomma
           americanum RepID=A0FD64_9COXI
          Length = 154

 Score =  182 bits (464), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 62/149 (41%), Positives = 92/149 (61%)

Query: 7   HKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLF 66
            +     I LNK+  H+Y+IE+  EAGL L+ WE+KS+RAG   + +SYV+ +  EA+L 
Sbjct: 2   KQSALRIIVLNKKTFHDYYIEQRLEAGLVLESWEIKSIRAGHIQLRNSYVIFKSREAWLI 61

Query: 67  GANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVK 126
           G + +P +  + HV  DP R+RKLLLN+ E+D L   V ++  TVV L L+W     K +
Sbjct: 62  GVHCSPPSNIAYHVKPDPKRSRKLLLNKHEIDRLLSTVQKKRLTVVPLDLHWYKNHVKTE 121

Query: 127 IGVAKGKKQHDKRSDIKEREWQVDKARIM 155
           + + +GK+ HDKR  IK REW+  K   +
Sbjct: 122 VALVRGKRMHDKRETIKRREWERKKHETL 150


>UniRef50_B3DV24 TmRNA-binding protein n=1 Tax=Methylacidiphilum infernorum V4
           RepID=B3DV24_METI4
          Length = 152

 Score =  182 bits (464), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 60/148 (40%), Positives = 98/148 (66%)

Query: 11  SATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI 70
              + +N+RAR +Y I +  EAG+ L G EVKSL+AGK ++  ++  + +GEAFL+  NI
Sbjct: 2   ERDLVVNRRARKDYQILKTLEAGIVLLGSEVKSLKAGKGSLEGAFARVENGEAFLYQMNI 61

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVA 130
           +P   A+++ + DP   RKLLL+++E+  L G ++R+G T+V L LY++    KV +G+A
Sbjct: 62  SPYEKAASYALRDPKAPRKLLLHKKEIGELAGAISRQGRTIVPLKLYFRRGKIKVLLGIA 121

Query: 131 KGKKQHDKRSDIKEREWQVDKARIMKNA 158
            G+ + DKR  IKE+E Q + +R++K  
Sbjct: 122 SGRSKVDKREKIKEQETQREISRVLKRR 149


>UniRef50_B9XT05 SsrA-binding protein n=1 Tax=bacterium Ellin514 RepID=B9XT05_9BACT
          Length = 151

 Score =  182 bits (464), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 58/143 (40%), Positives = 84/143 (58%), Gaps = 1/143 (0%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
           A I  N +AR +Y I E FEAG+AL+G EVKSLRAG   I+D++  + + + FL+  +I 
Sbjct: 2   ADILSNHKARRDYHILETFEAGIALKGTEVKSLRAGLGQIADAFARVENDQVFLYNVHID 61

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
                +     +P   RKLLL++ E+  L+G  + +G  +  LS YWKN   KV + V K
Sbjct: 62  EYRFGNRQ-NHEPKSARKLLLHKSEIRKLFGLASVKGNALFPLSFYWKNGKVKVALAVGK 120

Query: 132 GKKQHDKRSDIKEREWQVDKARI 154
           GK + DKR DIK+R+   +  R 
Sbjct: 121 GKVEFDKRDDIKKRDADRELKRA 143


>UniRef50_A6L927 SsrA-binding protein n=17 Tax=Bacteria RepID=SSRP_PARD8
          Length = 153

 Score =  182 bits (462), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 51/152 (33%), Positives = 83/152 (54%), Gaps = 2/152 (1%)

Query: 6   AHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFL 65
             K  +     NKRA  +Y + + F AG+ L G E+KS+R GKA++ D++ ++  GE ++
Sbjct: 2   KEKISNNIQIKNKRATFDYELLDTFTAGIVLTGTEIKSIRLGKASLVDTFCIVEKGELWV 61

Query: 66  FGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NAWCK 124
               I       T+   +  R RKLLL ++EL  + G V   G+T+V   L+       K
Sbjct: 62  KNMYIAEY-FYGTYNNHNARRDRKLLLTKKELRKIEGAVRASGFTIVPTRLFINEKGLAK 120

Query: 125 VKIGVAKGKKQHDKRSDIKEREWQVDKARIMK 156
           V + +A+GKK++DKR  I+ER+ + +  R  K
Sbjct: 121 VVVAIARGKKEYDKRDSIRERDDRREMDRAFK 152


>UniRef50_Q83N13 SsrA-binding protein n=2 Tax=Tropheryma whipplei RepID=SSRP_TROWT
          Length = 211

 Score =  181 bits (461), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 56/157 (35%), Positives = 86/157 (54%), Gaps = 1/157 (0%)

Query: 4   KKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEA 63
            +  K     IA NK A + YF+++ FEAGL L G EVKS+R  K ++S++Y+   + E 
Sbjct: 17  PERSKIPDCVIASNKSAEYNYFLDKTFEAGLVLLGSEVKSVRQQKISLSEAYIYEDNSEI 76

Query: 64  FLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWC 123
           +L    I            +P R RKLLL++ ++  L   +   G T+V +  Y++N   
Sbjct: 77  WLANLYIPEHKTGG-WTNHNPRRLRKLLLHKYQIARLRKDLLIPGITLVPIKFYFRNGRA 135

Query: 124 KVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           K+ I +A+GKK  DKR  IKERE  ++  R +K+  R
Sbjct: 136 KLLIALARGKKLIDKREVIKEREATLEANRALKHRLR 172


>UniRef50_B2GAM5 SsrA-binding protein n=4 Tax=Bacteria RepID=SSRP_LACF3
          Length = 157

 Score =  181 bits (461), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 64/158 (40%), Positives = 94/158 (59%), Gaps = 1/158 (0%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M KK      +  IA NK+ARH+Y + + FEAGL L G E+KS+RA +  + D Y    +
Sbjct: 1   MAKKNHQGLDANLIAQNKKARHDYTVTDTFEAGLVLTGTEIKSVRARRVTLKDGYAQFHN 60

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GE +L   +I   A        DP R RKLLL+++EL  L G +  +G T+V L +Y K+
Sbjct: 61  GELWLMNVHIAEFA-GGNIFNHDPLRNRKLLLHKKELKKLQGELTAKGVTLVPLKMYLKH 119

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
            + KV +G+A+GK ++DKR+ IK+RE      R+MK+ 
Sbjct: 120 GYAKVLLGLAQGKHEYDKRNAIKKREQDRQIDRVMKHY 157


>UniRef50_Q04TV5 SsrA-binding protein n=6 Tax=Leptospira RepID=SSRP_LEPBJ
          Length = 160

 Score =  181 bits (461), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 60/158 (37%), Positives = 98/158 (62%), Gaps = 3/158 (1%)

Query: 4   KKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEA 63
            K  +PG + +  NK+A+  + +    EAG+ L G EVKSLR  K N++D++  +++GE 
Sbjct: 3   NKKEEPGHSPLV-NKKAKFNFELVSFIEAGIVLSGSEVKSLREKKGNLTDAFAKIKNGEV 61

Query: 64  FLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNA-W 122
           FL   +ITP      +V     R RKLLL+++E++ L  +V  +G  +VA  +Y+KN   
Sbjct: 62  FLENFSITPYKNGG-YVNHPEIRPRKLLLHKKEIEKLERQVKEKGLVLVATKVYFKNNLR 120

Query: 123 CKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
            KV+I V K KK HDKR D+++++ Q + AR +K+++R
Sbjct: 121 VKVEIAVGKPKKIHDKRDDMQKKDAQQEIARALKSSNR 158


>UniRef50_D1VZH7 SsrA-binding protein n=1 Tax=Prevotella timonensis CRIS 5C-B1
           RepID=D1VZH7_9BACT
          Length = 160

 Score =  180 bits (459), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 58/160 (36%), Positives = 92/160 (57%), Gaps = 3/160 (1%)

Query: 1   MTK-KKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLR 59
           M K ++A +  S     NKRA  EYF  + + AG+ L G E+KS+R GKA++ D++  + 
Sbjct: 2   MNKDEQALRKKSPIQIKNKRASFEYFFIDTYTAGIVLTGTEIKSIRLGKASLVDAFCYIN 61

Query: 60  DGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW- 118
           +GE ++ G NI+P     +    +  R RKLLL +RE+  L       G T++ + L+  
Sbjct: 62  NGEIWVKGMNISPY-FYGSFSNHEARRDRKLLLTKREIRRLEIDAKNPGNTILPVLLFID 120

Query: 119 KNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
           +    KV I +AKGKK++DKR  +KE+E Q +  R +K+ 
Sbjct: 121 QKGRAKVDIVLAKGKKEYDKRQSLKEKEDQREMDRALKHY 160


>UniRef50_C0JZT0 SsrA-binding protein n=1 Tax=uncultured bacterium URE12
           RepID=C0JZT0_9BACT
          Length = 163

 Score =  180 bits (459), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 65/160 (40%), Positives = 92/160 (57%), Gaps = 2/160 (1%)

Query: 2   TKKKAHK-PGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
            KK   K      IA N++ARH+Y IE+  EAGLAL+G EVKSLR     I+ ++  +  
Sbjct: 4   AKKSDEKDKNFEQIATNRKARHDYLIEDTIEAGLALEGPEVKSLRLKHCVITSAFARVEP 63

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
              +L+G  I+P A  +T    DP RTRKLLL + E+  L   V  +G  +VAL +Y+K 
Sbjct: 64  RGVYLYGMQISPYAF-NTLTQLDPVRTRKLLLKKTEIRRLSRAVEIKGMALVALEVYFKR 122

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
            W KV IG+ +GKK  DK+  IK+R+   +  R  K  ++
Sbjct: 123 GWAKVLIGLGRGKKAADKKETIKKRDIDREMRRDFKEKYK 162


>UniRef50_Q6MQ46 SsrA-binding protein n=1 Tax=Bdellovibrio bacteriovorus
           RepID=SSRP_BDEBA
          Length = 152

 Score =  180 bits (458), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 58/150 (38%), Positives = 87/150 (58%), Gaps = 1/150 (0%)

Query: 9   PGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGA 68
                +  NK+AR +Y I E +EAGL L G EVKSLR     + DSY+  +  EA+L  A
Sbjct: 3   ENILIVHENKKARFDYTIVETYEAGLQLMGSEVKSLRNKDVQLKDSYISFKGDEAYLQNA 62

Query: 69  NITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIG 128
           +I     AS++    P R RKLL+++ ELD ++  +  +GY+ V L +Y+KN   K++I 
Sbjct: 63  HIAEYK-ASSYNNHVPERHRKLLMHRNELDEIFEALREKGYSCVPLKIYFKNGRAKLQIA 121

Query: 129 VAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
           + KGKK HDKR  IK+R+        ++ +
Sbjct: 122 LVKGKKTHDKREAIKKRDVSDQIRSSLRRS 151


>UniRef50_C9RKN3 SsrA-binding protein n=1 Tax=Fibrobacter succinogenes subsp.
           succinogenes S85 RepID=C9RKN3_FIBSS
          Length = 156

 Score =  179 bits (456), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 57/156 (36%), Positives = 90/156 (57%), Gaps = 4/156 (2%)

Query: 7   HKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLR--DGEAF 64
            K  S  +  N++A H YF++E FE G+ L G EVKS+R GK  + ++++ +     E +
Sbjct: 3   KKESSTPVIQNRKANHLYFVDETFEVGIMLIGSEVKSIRNGKCTLGEAWIDIDENKDELW 62

Query: 65  LFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCK 124
           L GA+I     A+      P R RKLL +  E+  +      +G T++ L +Y+KN   K
Sbjct: 63  LVGAHIDEYLFAN-RFNHFPARRRKLLAHTHEIQKMRKAKELKGCTIIPLKMYFKNRIAK 121

Query: 125 VKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           +++G+ +GK QHDKR DI  R+ +++ AR  K AHR
Sbjct: 122 LEVGICRGKDQHDKRQDILVRDAKMEMARAAK-AHR 156


>UniRef50_Q02A69 SsrA-binding protein n=1 Tax=Candidatus Solibacter usitatus
           Ellin6076 RepID=SSRP_SOLUE
          Length = 156

 Score =  179 bits (455), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 54/158 (34%), Positives = 82/158 (51%), Gaps = 3/158 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M  KK        ++ N++A H YF+ E FE G+ L G EVK+ +  K  + D+Y  +  
Sbjct: 1   MADKKDF--AFKILSDNRQAGHNYFLSERFECGMVLTGTEVKAAKDAKIQLKDAYASVLG 58

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
            EA+L  A+I+  +  +      P R RKLLL++RE+D L      +G  ++   +Y KN
Sbjct: 59  DEAWLLNAHISQYSHGNRE-NHLPVRNRKLLLHRREIDKLQEITREKGLALIPTKIYMKN 117

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
              K +I VAKGKK +DKR+  K R    +    M+  
Sbjct: 118 GKIKCEIAVAKGKKLYDKRAADKARTADDEARAEMRRR 155


>UniRef50_B8D947 SsrA-binding protein n=4 Tax=Buchnera aphidicola RepID=SSRP_BUCA5
          Length = 162

 Score =  179 bits (454), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 73/157 (46%), Positives = 113/157 (71%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M +KK ++  S+ I +NK+A + YFIE+ F++GL L+GWE+KS+R+GK NIS+SY++   
Sbjct: 1   MLQKKKYQKKSSKIIINKKAYYNYFIEKVFQSGLVLEGWEIKSIRSGKVNISESYIINDR 60

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
            E +L    I P+ ++S    CDPTR +KLLL++ E+D L  +    GYT+V+LSL+WK 
Sbjct: 61  NEMYLCNCLIEPLQMSSNRFSCDPTRKKKLLLHKNEIDFLSLKKKNTGYTMVSLSLFWKK 120

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKN 157
           +WCK++ G+AKGK   DKR ++K+REW+ +K +I+K 
Sbjct: 121 SWCKLEFGLAKGKTAQDKRINLKKREWEQEKLKILKK 157


>UniRef50_A8EWH6 SsrA-binding protein n=48 Tax=Epsilonproteobacteria
           RepID=SSRP_ARCB4
          Length = 158

 Score =  177 bits (451), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 59/159 (37%), Positives = 99/159 (62%), Gaps = 3/159 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M  KK  K     +  NK+A H++ I E  EAG+ L+G EVK++R G+ N+ DS+V +  
Sbjct: 1   MANKKDTKKN--LVFKNKKAFHDFTILETLEAGIVLEGSEVKAIREGRVNLKDSFVRIIK 58

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK- 119
           GE FL  A+I+ ++   +    D  R+RKLLL+ +++D +Y +V ++G T+VAL LY+  
Sbjct: 59  GEVFLLNAHISHLSTTHSTYRPDERRSRKLLLHSKQIDKMYSKVTKDGITLVALKLYFND 118

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
               K+++  A+GKK HDKR D+K +  + +  +++K+ 
Sbjct: 119 KNMIKIEVATAQGKKLHDKREDLKAKTMKRETEQVLKSF 157


>UniRef50_C5JAN1 SsrA-binding protein n=1 Tax=uncultured bacterium
           RepID=C5JAN1_9BACT
          Length = 153

 Score =  177 bits (451), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 61/152 (40%), Positives = 95/152 (62%), Gaps = 4/152 (2%)

Query: 11  SATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYV--LLRDGEAFLFGA 68
              IALNK A+ +Y + E  EAG+ L G+EVKS R G  +I +S+V  +   GE +LF A
Sbjct: 3   HKVIALNKLAKFDYSLLEVIEAGIVLTGFEVKSARLGGISIRESHVGEMQGSGELYLFNA 62

Query: 69  NITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NAWCKVKI 127
           N      A+T +  +P R RKLLL +R+++ L G+V+R+G+T++ + +Y+      K++I
Sbjct: 63  NFPEYIHATT-MKQEPKRPRKLLLGRRQINKLLGQVHRKGFTIIPVQMYFNEKGIIKIEI 121

Query: 128 GVAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
            +A+GK   DKR  IK REW  +K R++K + 
Sbjct: 122 ALAQGKNVVDKRETIKLREWDREKHRVLKASS 153


>UniRef50_Q2ST23 SsrA-binding protein n=4 Tax=Mollicutes RepID=SSRP_MYCCT
          Length = 148

 Score =  177 bits (450), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 52/147 (35%), Positives = 90/147 (61%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
               I  NK+A   Y I + ++AG+ L G E+KS+R    +I++++VL+R  E ++   N
Sbjct: 2   SEHLIVKNKKAYFNYEIIQTYQAGIVLNGPEIKSIRNHDVSINEAFVLIRKKEIYILNMN 61

Query: 70  ITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGV 129
           +     A+     + TRTRKLLL+++E+  +  ++ +E  T++ + LY+KN + K++I +
Sbjct: 62  VKKYQFANYIKGLEETRTRKLLLHKKEIIKILNKIKQENLTIIPIKLYFKNDYVKLEIAL 121

Query: 130 AKGKKQHDKRSDIKEREWQVDKARIMK 156
           AKGKK HDKR  IK+R+ +  + R  K
Sbjct: 122 AKGKKLHDKRQTIKKRDTERKELRDYK 148


>UniRef50_Q3ARF1 SsrA-binding protein n=11 Tax=Chlorobiaceae RepID=SSRP_CHLCH
          Length = 157

 Score =  177 bits (449), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 55/160 (34%), Positives = 96/160 (60%), Gaps = 4/160 (2%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M+K+   +   A +  N++ARHE+ I E F AG+ L G EVKS+R G+A++++S+ ++  
Sbjct: 1   MSKQPQQRYAEAIV--NRKARHEFEIIETFVAGIQLAGSEVKSVRLGQASLNESFAIILR 58

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK- 119
            E +L    ITP       V+ +  R+RKLLL+++E+  L  +V+ +G T+V L  ++  
Sbjct: 59  NEVWLENMQITPYKHNRMEVL-EAKRSRKLLLHKKEIAKLQAKVSEKGLTLVPLKAFFTP 117

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
           +   K+++ +A+GKK +DKR  +K RE Q    ++ K   
Sbjct: 118 HGLLKIELAIARGKKLYDKRETLKNRENQRHLDQLRKQYS 157


>UniRef50_B1AI43 SsrA-binding protein n=16 Tax=Mycoplasmataceae RepID=SSRP_UREP2
          Length = 141

 Score =  177 bits (449), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 49/138 (35%), Positives = 78/138 (56%), Gaps = 1/138 (0%)

Query: 13  TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
            I  NK AR  Y + + FE G+ L+G EVKS+     +I+++YV +   +A +   ++  
Sbjct: 1   MIVSNKHARRNYELLDFFECGIVLKGTEVKSISRANCSINEAYVQIIKNQALILNMHVAN 60

Query: 73  MAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKG 132
               +     DP R RKLLL+++E+  L   V  +  T+V   +YWKN   K++I + KG
Sbjct: 61  FFEGNN-FNQDPYRNRKLLLHKKEIIRLQHLVKTQHMTIVPTKIYWKNNKLKIEIALGKG 119

Query: 133 KKQHDKRSDIKEREWQVD 150
           K+ HDKR DIK+R+   +
Sbjct: 120 KQLHDKREDIKKRDLARE 137


>UniRef50_B7KVC8 SsrA-binding protein n=25 Tax=cellular organisms RepID=SSRP_METC4
          Length = 157

 Score =  176 bits (448), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 68/159 (42%), Positives = 96/159 (60%), Gaps = 4/159 (2%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M  K    PG   +A N+ AR+ Y IE+  EAG+AL G EVKSLR GKA I +SY     
Sbjct: 1   MAPKPD--PGRRVVADNRSARYHYAIEDTLEAGIALTGTEVKSLRGGKATIGESYAGPSG 58

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK- 119
            +  LF A I     A+     D  R R+LLL++R+++ L G   R+GYTV+ L +Y+  
Sbjct: 59  NDLMLFNAYIPEYLEAN-RFNHDTKRPRRLLLHRRQINKLIGATQRQGYTVIPLKIYFND 117

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
               KV++G+ KGK+ HDKR  +K+R+W  DKAR+M++ 
Sbjct: 118 KGRAKVELGLGKGKQLHDKRESVKQRDWDRDKARLMRDK 156


>UniRef50_A0M3P0 SsrA-binding protein n=13 Tax=Bacteroidetes RepID=SSRP_GRAFK
          Length = 157

 Score =  174 bits (443), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 53/145 (36%), Positives = 82/145 (56%), Gaps = 2/145 (1%)

Query: 15  ALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMA 74
             N++A+  Y   +++ AG+ L G E+K++R GKANI++S+    + E F+   ++   +
Sbjct: 13  IKNRKAKFNYEFLDKYTAGIKLAGTEIKAIREGKANIAESFCEFNNHELFVINMHVEEYS 72

Query: 75  VASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NAWCKVKIGVAKGK 133
            A TH   +P   RKLLL +REL  L   V   G T++ L L+       K++I +AKGK
Sbjct: 73  HA-THFNHNPRSQRKLLLQRRELRKLEKEVTNSGLTIIPLRLFINDRGLAKLQISLAKGK 131

Query: 134 KQHDKRSDIKEREWQVDKARIMKNA 158
           K +DKR  IK+RE +    RI K  
Sbjct: 132 KLYDKRETIKDRESKRRLDRIQKEY 156


>UniRef50_B7GAQ2 Predicted protein (Fragment) n=3 Tax=Bacillariophyta
           RepID=B7GAQ2_PHATR
          Length = 160

 Score =  172 bits (438), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 52/158 (32%), Positives = 85/158 (53%), Gaps = 3/158 (1%)

Query: 4   KKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDG-- 61
           KK +K   +TI++N+ A   Y I +  EAG++L G EVKS+R GK N+ D Y+       
Sbjct: 1   KKKNKTRDSTISVNRVAYRNYEIVDTIEAGISLVGTEVKSIRNGKLNLRDGYIRPTKDGR 60

Query: 62  EAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-N 120
              L+  +I   + A      + TR R LL+++ E      +  ++G T+V L  Y+   
Sbjct: 61  SCILYNVHIGKHSQAGAFFQHEETRPRALLVHKAEARKFLQQTEQQGMTIVPLKAYYNDK 120

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
              K++I + +GK   DKR  IKER+ + ++ RI+K+ 
Sbjct: 121 NRVKLQIALCRGKNVRDKRVTIKERDAKREERRIIKSF 158


>UniRef50_B3EUI8 SsrA-binding protein n=4 Tax=Bacteroidetes RepID=B3EUI8_AMOA5
          Length = 156

 Score =  172 bits (436), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 53/154 (34%), Positives = 85/154 (55%), Gaps = 5/154 (3%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M  KK    G   +  NK+A  EY   ++F AG+ L G E+KS+R  K ++ ++Y   + 
Sbjct: 1   MNVKKNKTTG--LVIRNKQASFEYTFIDKFIAGIVLTGTEIKSIRKAKVSLQEAYCYFKS 58

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-K 119
           GE ++   +I      + +      R RKLLL ++EL+ L  +   +G T++ + L+  +
Sbjct: 59  GELWIKSMHIAQYEQGNIY-NHVENRERKLLLTRKELNKLI-KNQEKGLTIIPIQLFIDE 116

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKAR 153
           N   K++I +AKGKK +DKR  IKER+ Q D  R
Sbjct: 117 NNRAKLQIALAKGKKLYDKRQHIKERDVQRDMER 150


>UniRef50_Q11TP3 SsrA-binding protein n=36 Tax=Bacteroidetes RepID=SSRP_CYTH3
          Length = 153

 Score =  169 bits (429), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 53/141 (37%), Positives = 83/141 (58%), Gaps = 2/141 (1%)

Query: 15  ALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMA 74
             NK+A  EY   E++EAG+ L+G E+K++R  KA+IS++Y L  + E ++   NI+   
Sbjct: 12  IKNKKASFEYEFLEKYEAGIVLKGTEIKAIRMSKASISEAYCLFDNEELWIKNMNISSYD 71

Query: 75  VASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NAWCKVKIGVAKGK 133
             S     DP   RKLLL + EL  L+     +G T++AL L+     + K++I +AKGK
Sbjct: 72  KGS-FYNHDPLSARKLLLRKAELKKLFMHSKEKGLTIIALRLFTNERGYAKIEIALAKGK 130

Query: 134 KQHDKRSDIKEREWQVDKARI 154
           K +DKR  IK ++ + +  RI
Sbjct: 131 KLYDKRESIKSKDNEREMQRI 151


>UniRef50_B1GZD8 SsrA-binding protein SmpB n=1 Tax=uncultured Termite group 1
           bacterium phylotype Rs-D17 RepID=B1GZD8_UNCTG
          Length = 153

 Score =  167 bits (423), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 51/145 (35%), Positives = 83/145 (57%), Gaps = 2/145 (1%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
            T++ N++A + Y I E+ E G+ L G+EVKS R    ++ DS V   D EAF     I 
Sbjct: 8   KTLSSNRKAYYNYEILEKLETGIVLSGYEVKSARQSNISLVDSVVRFSDCEAFAENMFIA 67

Query: 72  PMAVASTHVV-CDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-KNAWCKVKIGV 129
                STH+   D  R RKLL+++ E++ +  +V  +G TV+ L +Y       K+ IG+
Sbjct: 68  SYEQISTHIADYDAKRKRKLLMHKSEINKMRTKVKEKGLTVIPLEVYIGNRGKIKLLIGL 127

Query: 130 AKGKKQHDKRSDIKEREWQVDKARI 154
           AKGKK ++K+  +K+++ + + AR 
Sbjct: 128 AKGKKTYNKKEALKKKDIEREVARE 152


>UniRef50_Q6Q8U8 Predicted SsrA n=1 Tax=uncultured marine gamma proteobacterium
           EBAC20E09 RepID=Q6Q8U8_9GAMM
          Length = 156

 Score =  166 bits (421), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 60/154 (38%), Positives = 93/154 (60%), Gaps = 1/154 (0%)

Query: 7   HKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLF 66
            K  +  I  NK A   + + E F+AG+ L+GWEVKSLR  K ++ +SYV +R GEA+L 
Sbjct: 2   SKEKTVLIVKNKNASRNFKLNESFQAGIVLEGWEVKSLRDSKVDVKNSYVNIRKGEAWLI 61

Query: 67  GANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVK 126
           G  I  +  +      D T++RKLLL+++E+  +      +G T V   +YWK+   K  
Sbjct: 62  GVKID-IPASLQQENIDTTKSRKLLLHKKEIAKIERLKGEKGLTCVLTRIYWKDNLIKCD 120

Query: 127 IGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           I + +GKK  D+R DIK+R+W+ D+ RI+KN+ +
Sbjct: 121 IAMGQGKKHRDQREDIKKRDWERDQGRILKNSKK 154


>UniRef50_UPI00016992A0 SsrA-binding protein n=1 Tax=Endoriftia persephone
           'Hot96_1+Hot96_2' RepID=UPI00016992A0
          Length = 148

 Score =  165 bits (420), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 61/107 (57%), Positives = 89/107 (83%)

Query: 13  TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
           TIALNK+A+H+YFIEE +EAG+AL+GWEVKSLRAG+ N++++YV++  GEA+LFGANI+P
Sbjct: 16  TIALNKKAKHDYFIEERYEAGVALEGWEVKSLRAGRINLTEAYVIINKGEAYLFGANISP 75

Query: 73  MAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK 119
           +   S+H+  +PTR RKLLL++ EL+ L G V R+G+T+V  ++Y +
Sbjct: 76  LPTVSSHIQPNPTRNRKLLLHRTELNKLIGLVERKGFTLVPTAMYLE 122


>UniRef50_Q89AM9 SsrA-binding protein n=1 Tax=Buchnera aphidicola (Baizongia
           pistaciae) RepID=SSRP_BUCBP
          Length = 158

 Score =  165 bits (420), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 63/156 (40%), Positives = 102/156 (65%), Gaps = 2/156 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M +    KP    I +N++A++ + I+E FEAG+ L GWEVKS+R GK NIS+SY+ L++
Sbjct: 1   MKRNSNRKPNE--ICINRKAKYSFSIKETFEAGIVLLGWEVKSVRCGKINISNSYISLKN 58

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GE +L  +   P++ ++ ++  +  R +K+LL +RE+  LY ++ +   T++ LS+++K 
Sbjct: 59  GEMYLVNSQFDPISKSNLYITYECNRIKKILLRKREITYLYSKLYKSHLTIIVLSIFFKK 118

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMK 156
            WCKVKIG+AKGK   DKR   K  EW+  + R +K
Sbjct: 119 QWCKVKIGIAKGKTIKDKREHKKLSEWKKTQNRFVK 154


>UniRef50_P75043 SsrA-binding protein n=2 Tax=Mycoplasma RepID=SSRP_MYCPN
          Length = 147

 Score =  164 bits (417), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 46/141 (32%), Positives = 82/141 (58%), Gaps = 1/141 (0%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             +  N RA+++Y++   + AGL L+G EVKSL  G+ ++ ++YV +   E ++   +I+
Sbjct: 2   RVLVNNPRAQYDYYLLTGYCAGLVLKGSEVKSLALGQGSLKEAYVFIDKHEVYIKDFSIS 61

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
           P A +         R +KLLLN+ E+  +  R  +EG +++ L +++KN   K++I +AK
Sbjct: 62  PYAFSGE-FNHPFKRVKKLLLNRNEIKQITARQKQEGLSIIPLKVFFKNGKIKMEIWLAK 120

Query: 132 GKKQHDKRSDIKEREWQVDKA 152
            KK+ DKR  IK +  Q +  
Sbjct: 121 PKKKFDKREAIKSKTIQRELR 141


>UniRef50_B1VAG4 SsrA-binding protein n=2 Tax=Candidatus Phytoplasma
           RepID=B1VAG4_PHYAS
          Length = 176

 Score =  164 bits (416), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 96/149 (64%), Gaps = 2/149 (1%)

Query: 12  ATIALNKRARHEYFIEEE-FEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI 70
            TIA NK+A  ++F+E++ + AG+ L G EVKS+R GK ++++SY  +++ E F+   +I
Sbjct: 28  KTIATNKKAVFDFFLEKKKYHAGIKLLGNEVKSIRLGKISLNNSYAYIKNNEIFIVNLSI 87

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVA 130
                 S  +  D  RT+KLLL ++E+  +  ++  +G++V+ L +Y++    KV+I +A
Sbjct: 88  LKYPF-SCCMQYDENRTKKLLLRKQEIIQIQNKIKTQGFSVIPLKVYFEKNLVKVEIVLA 146

Query: 131 KGKKQHDKRSDIKEREWQVDKARIMKNAH 159
           KGKK++DKR+ +KE+  Q+   + +K  +
Sbjct: 147 KGKKKYDKRNSLKEKAAQLSIQKNLKKIN 175


>UniRef50_C6X237 TmRNA-binding protein SmpB n=2 Tax=Flavobacteriales
           RepID=C6X237_FLAB3
          Length = 155

 Score =  164 bits (416), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 60/159 (37%), Positives = 86/159 (54%), Gaps = 5/159 (3%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M K K  K       LN+RAR EY + EE EAG+ L G E+KSLR+ KA+I+D++    D
Sbjct: 1   MFKMKIEKS---VTILNRRARFEYELLEEIEAGMVLTGTEIKSLRSSKASITDAFCQFID 57

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK- 119
           GE ++    I    +  T       R RKLLL++ EL     ++   G T++ L +Y   
Sbjct: 58  GELYIINMMIDEYKL-GTFYNHKTKRERKLLLHKTELKKFEKKLKDVGNTIIPLKMYINA 116

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
               K+ I V +GKK  DKR  IK+RE + +  RI+K +
Sbjct: 117 KGKAKILIAVGRGKKLFDKRESIKDRENKRNIDRILKKS 155


>UniRef50_Q1LSR7 SsrA-binding protein n=17 Tax=Gammaproteobacteria RepID=SSRP_BAUCH
          Length = 161

 Score =  162 bits (411), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 93/149 (62%), Positives = 123/149 (82%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
            TI  NKR R+EYFIE+EFEAG++L GWEVKSLRAG  +I+DSY+LL+D EAFL GA + 
Sbjct: 13  TTITQNKRVRYEYFIEQEFEAGISLLGWEVKSLRAGIVHINDSYILLKDSEAFLLGATLR 72

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
           P+ VAS+H++  P R+RKLLL +RELD+L G+V+R+GYT+V +SLYW+N+  K+++G+AK
Sbjct: 73  PLIVASSHILYSPMRSRKLLLRRRELDTLLGKVHRKGYTIVPISLYWRNSLAKIQLGIAK 132

Query: 132 GKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           GKKQ+DKR  IKEREW ++KARI K  HR
Sbjct: 133 GKKQYDKRHCIKEREWLLNKARITKLVHR 161


>UniRef50_Q0SPD1 SsrA-binding protein n=20 Tax=Borrelia RepID=SSRP_BORAP
          Length = 150

 Score =  159 bits (403), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 50/146 (34%), Positives = 89/146 (60%), Gaps = 1/146 (0%)

Query: 11  SATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI 70
           +  +  NK+A+  YFIEE+   G+ L+G EVKS++A K + ++S+ +++  E +L   ++
Sbjct: 4   NTLLIENKKAKFNYFIEEKISCGIVLKGTEVKSIKAKKLSFNNSFAIIKKEELWLENLHV 63

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVA 130
           +     +     D  R RKLL+ ++EL  L     +EGYT++ +S Y K +  KV++G+ 
Sbjct: 64  SKYKEGNI-FNHDELRPRKLLIKKKELQRLKKFKEKEGYTLIPISFYLKKSIIKVEVGIC 122

Query: 131 KGKKQHDKRSDIKEREWQVDKARIMK 156
           KGKK +DKR  +K++  + D +R +K
Sbjct: 123 KGKKLYDKREILKQKSIKKDLSREIK 148


>UniRef50_Q7VRQ2 TmRNA-binding protein n=2 Tax=Candidatus Blochmannia
           RepID=Q7VRQ2_BLOFL
          Length = 148

 Score =  157 bits (399), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 67/147 (45%), Positives = 98/147 (66%), Gaps = 1/147 (0%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           I  NKR  H+YFIE+E E GL L GWEVKS+R+ K  I +SYV LRD EA++  AN   +
Sbjct: 3   IIQNKRVHHKYFIEKEIETGLVLLGWEVKSIRSRKITIENSYVSLRDQEAYMCNANFQ-I 61

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGK 133
                    DPTR RKLLL ++EL  L   ++++ YT++ L+L+WKN+W K  IG+AKGK
Sbjct: 62  QTNMNVSTPDPTRMRKLLLKKQELSFLTEIMHKKSYTIIILNLFWKNSWIKANIGIAKGK 121

Query: 134 KQHDKRSDIKEREWQVDKARIMKNAHR 160
           K++DKR  +   +W++++  I+K  ++
Sbjct: 122 KKYDKRHIVNTHQWKLEQKHIIKCVNK 148


>UniRef50_A5KSW6 SsrA-binding protein n=2 Tax=candidate division TM7
           RepID=A5KSW6_9BACT
          Length = 154

 Score =  157 bits (397), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 6/156 (3%)

Query: 3   KKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGE 62
           KKK    G+    LN+RA+ +Y + +E   GL L G EV++ R G   +  +YV +R+ E
Sbjct: 2   KKKTTTSGA---VLNRRAKFDYELGDELAVGLVLNGPEVRAARDGHVQLKGAYVTIRNDE 58

Query: 63  AFLFGANIT--PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
            +L  A+ +  P            T+ RKLL +++++ +L  +  + G T+V L L+   
Sbjct: 59  LWLNNASFSVKPAQPKRGDARAVDTQPRKLLAHRKQIATLAEQ-KKTGLTIVPLKLFTSG 117

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMK 156
              K+ I   KGKK++DKR  +K R  + +  R M+
Sbjct: 118 RHIKLLIAAGKGKKKYDKRETLKRRAQEREAQRAMR 153


>UniRef50_Q6YR70 SsrA-binding protein n=3 Tax=Candidatus Phytoplasma asteris
           RepID=SSRP_ONYPE
          Length = 152

 Score =  156 bits (395), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 52/150 (34%), Positives = 94/150 (62%), Gaps = 2/150 (1%)

Query: 12  ATIALNKRARHEYFIEEE-FEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI 70
            TI  NK+A ++Y +E++ ++AG+ L G EVKS+R GK N+ +SY+ +++ EAF+    I
Sbjct: 2   KTIITNKKAFYDYSLEKKKYQAGIKLLGSEVKSIRIGKINLLNSYIHIKNEEAFIVNMTI 61

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVA 130
                 S  +  D  RT+KLLL + E+  +  ++  E  +V+ L +Y+     K++I ++
Sbjct: 62  LKYPF-SCCLAYDENRTKKLLLQKHEIIQIKNKIKTEKLSVIPLKVYFNKNLVKLEIALS 120

Query: 131 KGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           KGKKQHDKR+ +K+ + ++   + +KN ++
Sbjct: 121 KGKKQHDKRNALKDFDAKLRIQKTLKNFNQ 150


>UniRef50_Q601U1 SsrA-binding protein n=3 Tax=Mycoplasma hyopneumoniae
           RepID=SSRP_MYCH2
          Length = 145

 Score =  153 bits (387), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 48/147 (32%), Positives = 80/147 (54%), Gaps = 4/147 (2%)

Query: 13  TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
            +  NKRA  +Y I + F AG+ L GWEVKS++A   ++  ++   +  E FL  A I+ 
Sbjct: 3   ILIKNKRANFDYEIIDRFTAGIVLLGWEVKSIQAKNISLVGAFCYFKGHELFLSNAKISE 62

Query: 73  MAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKG 132
              +         R+RKLL+++ EL  +          ++ L +  KN   K++I +AKG
Sbjct: 63  YKGSRGQ----TDRSRKLLMHKHELKKILKEKITRKLAIIPLFIGQKNRKIKLEIALAKG 118

Query: 133 KKQHDKRSDIKEREWQVDKARIMKNAH 159
           K + DKR+ IKER+ + + A+ +KN +
Sbjct: 119 KTKLDKRNLIKERDQKREAAKFLKNYY 145


>UniRef50_B3PM30 SsrA-binding protein n=2 Tax=Mycoplasma RepID=B3PM30_MYCA5
          Length = 143

 Score =  151 bits (382), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 51/139 (36%), Positives = 73/139 (52%), Gaps = 5/139 (3%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLL-RDGEAFLFGANI 70
           A I  NK  + EY I   +E G++L GWE KSLRA  A +  S+  + +  E +L  A I
Sbjct: 2   ALIVKNKFPKLEYEIHSTYECGISLLGWEAKSLRAKNAKLESSFCSISQSDELWLNNAYI 61

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVA 130
               +    V  DP R+RKLL+++ E+  L     R     + LS YW+    KV+I +A
Sbjct: 62  AQYML----VKGDPLRSRKLLMHRHEIKKLRSLQQRLNLIFIPLSFYWRGNKIKVEIALA 117

Query: 131 KGKKQHDKRSDIKEREWQV 149
           K   +HDKR  IK+ E + 
Sbjct: 118 KHLNKHDKREKIKKDEAKK 136


>UniRef50_Q6KI26 SsrA-binding protein n=1 Tax=Mycoplasma mobile RepID=SSRP_MYCMO
          Length = 142

 Score =  149 bits (377), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 49/143 (34%), Positives = 81/143 (56%), Gaps = 4/143 (2%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             I  NK A   Y I E+++AGL L+GWEVKS+R  K  +  +++  ++ EA++   +I+
Sbjct: 2   KIIIKNKDAFFNYEILEKYKAGLILKGWEVKSIRENKVQLKGAFITFKNDEAYITNMHIS 61

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
                   V  +    RKLLLN+ E+  +  + NR    V+ L+L+W N + K++I +AK
Sbjct: 62  QYMS----VKGNELEPRKLLLNKHEIRHIQDKKNRNSLAVIPLNLFWDNNYIKLEIALAK 117

Query: 132 GKKQHDKRSDIKEREWQVDKARI 154
           GK + DKR  I E++ +    +I
Sbjct: 118 GKTKADKRHRILEKDVRKHLKKI 140


>UniRef50_A9G6R4 SmpB-like protein n=1 Tax=Sorangium cellulosum 'So ce 56'
           RepID=A9G6R4_SORC5
          Length = 139

 Score =  149 bits (376), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 52/122 (42%), Positives = 74/122 (60%), Gaps = 2/122 (1%)

Query: 34  LALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLN 93
           + L G EVK LR G A ++DS+  + +GEAFL G NI  M  A+     +  R RKLLL+
Sbjct: 1   MVLLGSEVKMLRDGAAELTDSWCAIENGEAFLKGVNIPVMPGAA--FGHEAKRPRKLLLH 58

Query: 94  QRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKAR 153
           + E++++   V REG TV+A  LY+KN   K +I +AKGKK  DKR  +KE++   +   
Sbjct: 59  ESEIEAIRKSVEREGMTVIATRLYFKNGRVKAEIALAKGKKTVDKRESLKEKDATREARA 118

Query: 154 IM 155
            M
Sbjct: 119 AM 120


>UniRef50_Q7NB37 SsrA-binding protein n=1 Tax=Mycoplasma gallisepticum
           RepID=SSRP_MYCGA
          Length = 144

 Score =  148 bits (375), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 50/142 (35%), Positives = 79/142 (55%), Gaps = 1/142 (0%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             +  NK+A++ Y + +++EAG++L G EVKSL      + DSYV++R  EA+L    I 
Sbjct: 3   RLLVNNKKAKYNYELLDKYEAGISLSGNEVKSLALHHGKLDDSYVIIRKNEAYLLNLLIP 62

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
                 T  V + TRTRKLLL++ E+  +     +    ++   +Y+ N   KV I +A+
Sbjct: 63  KYKF-DTSKVLNETRTRKLLLHKSEILKIDLIKKQHSLVIIPYQIYFVNNKIKVSIYLAR 121

Query: 132 GKKQHDKRSDIKEREWQVDKAR 153
            KK++DKR  IKERE      +
Sbjct: 122 PKKRYDKRQTIKEREINKKIRK 143


>UniRef50_Q057R8 TmRNA-binding protein n=1 Tax=Buchnera aphidicola str. Cc (Cinara
           cedri) RepID=Q057R8_BUCCC
          Length = 156

 Score =  147 bits (372), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 52/135 (38%), Positives = 85/135 (62%)

Query: 22  HEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVASTHVV 81
           + ++I+++F +G+ LQGWEVKS+RAG   ISD +V++++ E +L      P+   S    
Sbjct: 17  YNFYIKKKFISGIELQGWEVKSIRAGHVQISDGHVIIKNNEVYLTNVQFQPLIYTSDLKF 76

Query: 82  CDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSD 141
           C   R RKLLL ++E+  L     ++GYT+V + L+W  +WCK+KI + KGK + DKR D
Sbjct: 77  CLSNRVRKLLLKKKEIFFLKMYSIKKGYTIVPIKLFWIKSWCKIKIALVKGKSKMDKRQD 136

Query: 142 IKEREWQVDKARIMK 156
            +   W++++  I K
Sbjct: 137 KRNNSWKIERDTIFK 151


>UniRef50_C1D1M8 Putative SsrA-binding protein n=1 Tax=Deinococcus deserti VCD115
           RepID=C1D1M8_DEIDV
          Length = 143

 Score =  144 bits (363), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 54/139 (38%), Positives = 81/139 (58%), Gaps = 1/139 (0%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           +  N+RA +EY + E FEAG++L G EVKS+RAG  +  D++  L  G   L G  I   
Sbjct: 4   VYTNRRAHYEYELLERFEAGISLTGSEVKSIRAGGVDFRDAFARLHGGNVDLEGLYIPAY 63

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGK 133
             A T+   +P RTR+LLLN+ E+  L   + ++G T+V   LY K  + KV++ +A+GK
Sbjct: 64  KEA-TYNNHEPRRTRRLLLNRMEILKLKKGLEQKGLTLVPTRLYQKGQYFKVELALARGK 122

Query: 134 KQHDKRSDIKEREWQVDKA 152
           K HDKR    E+  + +  
Sbjct: 123 KLHDKRRADAEKTVRRELR 141


>UniRef50_A5IZI0 SsrA-binding protein n=3 Tax=Mycoplasma RepID=SSRP_MYCAP
          Length = 147

 Score =  141 bits (356), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 47/145 (32%), Positives = 84/145 (57%), Gaps = 6/145 (4%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             I+ N++  + Y I E+ EAG++L GWEVKS RA   N+++SY+  + GE FL  AN  
Sbjct: 2   KVISENRKGLYGYKIIEKHEAGISLLGWEVKSARAQTVNLTNSYIFFKKGELFLCNANFA 61

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVV-ALSLYWKN-AWCKVKIGV 129
              +    +  +  R RKLL++++E+  L  +++R   T +    +Y+ N +  KV+I +
Sbjct: 62  KYML----LKVEEDRDRKLLMHKKEIIRLKNKLDRLSSTTIKPTKIYFNNKSKIKVEIAL 117

Query: 130 AKGKKQHDKRSDIKEREWQVDKARI 154
            +G  + DKR D+K+R+ +    ++
Sbjct: 118 VQGMNRADKREDLKKRDNEKYMQKV 142


>UniRef50_Q8D389 SmpB protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of
           Glossina brevipalpis RepID=Q8D389_WIGBR
          Length = 160

 Score =  138 bits (350), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 70/155 (45%), Positives = 106/155 (68%)

Query: 3   KKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGE 62
           KKK  +     I+ NKRA++  +I++E EAGL+L+GWEVKSLR+   +IS SYV L+   
Sbjct: 2   KKKNTEKNFLIISRNKRAKYNTYIKKEMEAGLSLKGWEVKSLRSNNISISTSYVTLKSSS 61

Query: 63  AFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAW 122
           A+L GA        + + + +  R  +LLL++ E++SL+G V  +GY++V +SLYWK   
Sbjct: 62  AYLTGAVFQSNTNNNMNFIYEKERNIQLLLHKHEINSLFGYVKIKGYSIVVISLYWKYHK 121

Query: 123 CKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKN 157
            K+KIG+AKGKK+ DKR +IK+REW++ K+R+ K 
Sbjct: 122 AKLKIGIAKGKKKIDKRLEIKKREWEIKKSRLFKK 156


>UniRef50_A8Z637 SsrA (TmRNA)-binding protein n=2 Tax=Candidatus Sulcia muelleri
           RepID=A8Z637_SULMW
          Length = 146

 Score =  133 bits (336), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/141 (26%), Positives = 77/141 (54%), Gaps = 6/141 (4%)

Query: 15  ALNKRARHEYFIEEEFE--AGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
             N+RA  +Y +  +++  AG+ L G EVKS++    ++++SY  L     ++F   I+ 
Sbjct: 7   INNRRAYFDYELINKYKFIAGIELLGSEVKSIKNNNVSLNNSYCKLIKNNIYVFDMYISN 66

Query: 73  MAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NAWCKVKIGVAK 131
             +    +  +P R +KLLL ++E++ +Y ++N     ++  +++     + K+   +AK
Sbjct: 67  YLLG---INFNPKRVKKLLLKRKEINFIYNKINELKLNIIPTNIFLNERGYIKLIFFLAK 123

Query: 132 GKKQHDKRSDIKEREWQVDKA 152
            KK +DKR  IK + ++ +K 
Sbjct: 124 SKKNYDKRQSIKNKYFEREKN 144


>UniRef50_Q4A5T2 SsrA-binding protein n=2 Tax=Mycoplasma RepID=SSRP_MYCS5
          Length = 143

 Score =  128 bits (324), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 38/127 (29%), Positives = 71/127 (55%), Gaps = 6/127 (4%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             IA NK A+  Y I + FEAG+ L+GWEVKS RA    + ++Y  +   E FL  +   
Sbjct: 2   KIIATNKNAKRNYEILKTFEAGIKLEGWEVKSARASSVELKNAYCSIYKDEVFLKESYFK 61

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NAWCKVKIGVA 130
              +    +  + T+ RKLLL+++E+  +   + ++  +++   +Y+  N+  KV++ + 
Sbjct: 62  KYML----LKVEETKNRKLLLHKKEILKIKQEL-QKNLSLIPTKIYFNSNSLIKVELALG 116

Query: 131 KGKKQHD 137
           +G K++D
Sbjct: 117 RGLKKYD 123


>UniRef50_D0N0I1 Putative uncharacterized protein n=1 Tax=Phytophthora infestans
           T30-4 RepID=D0N0I1_PHYIN
          Length = 180

 Score =  125 bits (315), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 44/141 (31%), Positives = 67/141 (47%), Gaps = 6/141 (4%)

Query: 18  KRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVAS 77
           K A + Y +E E+  G+ LQ  EVKSLR   A++S ++      E FL   NI P+    
Sbjct: 44  KAAGNYYEVEREWNLGIVLQPSEVKSLRNRNADLSTAFGAFYKHELFLHDLNI-PVWRQG 102

Query: 78  THVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN-AWCKVKIGVAKGKKQH 136
                +PTR RKLL N+ EL  L    NR    ++ + +   N  W KV +     + Q 
Sbjct: 103 LIGRPEPTRVRKLLANRSELKKLQEFANRPNAQLIPMRIEVGNTGWIKVIMAACFKRGQI 162

Query: 137 DKRSDIKEREWQVDKARIMKN 157
           D R     R+ + +  R +++
Sbjct: 163 DNR----RRDDEREIKRQLRD 179


>UniRef50_C6SHY7 SsrA-binding protein n=1 Tax=Neisseria meningitidis alpha275
           RepID=C6SHY7_NEIME
          Length = 146

 Score =  122 bits (307), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 45/95 (47%), Positives = 65/95 (68%), Gaps = 1/95 (1%)

Query: 64  FLFGANITPM-AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAW 122
           F++ A I  +   ASTH+  D  R RKLLLNQ E++ L G+  R GYT+V L L++    
Sbjct: 50  FIWSAAILRLCPTASTHIKPDAVRPRKLLLNQSEINKLIGKTERAGYTIVPLDLHFSRGK 109

Query: 123 CKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKN 157
            K++IG+AKGKKQHDKR  +KE +W+ +K R++K+
Sbjct: 110 IKMEIGLAKGKKQHDKRQSMKEADWKREKQRLIKH 144


>UniRef50_C7LKD3 SsrA (TmRNA)-binding protein n=1 Tax=Candidatus Sulcia muelleri
           SMDSEM RepID=C7LKD3_SULMS
          Length = 150

 Score = 87.8 bits (217), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/141 (28%), Positives = 74/141 (52%), Gaps = 5/141 (3%)

Query: 12  ATIALNKRARHEYFIE--EEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
             I  NK+A  +Y +   E+F AG+ L G EVK ++  K +I +SY  L +   ++F   
Sbjct: 2   KLIINNKKAGFDYNLLKKEKFLAGIELLGIEVKLIKQKKVSIKNSYCKLINNNIYIFDMY 61

Query: 70  ITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN-AWCKVKIG 128
           I+   + +T     P R RKLLL ++E++ +  ++      ++   +   N  + K+K  
Sbjct: 62  ISNSNIYNTKFS--PKRRRKLLLKKKEINQIKKQIKNLNLNIIPTEIVLNNRNFIKIKFF 119

Query: 129 VAKGKKQHDKRSDIKEREWQV 149
           +AK KK+++KR+  K +  + 
Sbjct: 120 LAKSKKKYEKRNLRKIKSLEK 140


>UniRef50_Q7P475 Small protein B n=1 Tax=Fusobacterium nucleatum subsp. vincentii
          ATCC 49256 RepID=Q7P475_FUSNV
          Length = 84

 Score = 83.9 bits (207), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/58 (48%), Positives = 44/58 (75%)

Query: 13 TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI 70
           IA NK+A  +YFIEE++EAG+ L+G EVKS++AGK +I +S+V + + E F+ G ++
Sbjct: 2  IIANNKKAFFDYFIEEKYEAGIELKGSEVKSIKAGKVSIKESFVRIINDEIFIMGMSV 59


>UniRef50_UPI0001912596 SsrA-binding protein n=1 Tax=Salmonella enterica subsp. enterica
          serovar Typhi str. E98-3139 RepID=UPI0001912596
          Length = 98

 Score = 65.4 bits (159), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 40/47 (85%), Positives = 42/47 (89%), Gaps = 1/47 (2%)

Query: 3  KKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVK-SLRAGK 48
          ++KAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVK S R   
Sbjct: 6  EEKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKISARRKS 52


>UniRef50_Q05FT0 Putative uncharacterized protein n=1 Tax=Candidatus Carsonella
           ruddii PV RepID=Q05FT0_CARRP
          Length = 116

 Score = 43.5 bits (102), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 16/119 (13%)

Query: 13  TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
            +  NK+   +YFI + F AG+ L+  ++  ++    NI+D  + L D    L       
Sbjct: 1   MLKKNKKILTKYFIIKTFIAGMILKSNDILIIKKNILNINDYIIKLSDNNINLIN----- 55

Query: 73  MAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
                        +   LLLN+RE + +      + Y  + + L+  N   K+KI + K
Sbjct: 56  -----------KKKKIILLLNKREQNIILYYNYNKNYKCIPIELFKLNFLFKLKISIVK 103


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_Q3MAP3 SsrA-binding protein n=12 Tax=Cyanobacteria RepI...   224   5e-58
UniRef50_B5F2A0 SsrA-binding protein n=362 Tax=Proteobacteria Re...   223   1e-57
UniRef50_A5UPS2 SsrA-binding protein n=171 Tax=Bacteria RepID=SS...   222   4e-57
UniRef50_A3PWV5 SsrA-binding protein n=83 Tax=cellular organisms...   216   2e-55
UniRef50_A0QU63 SsrA-binding protein n=25 Tax=Bacteria RepID=SSR...   214   7e-55
UniRef50_A9WJ45 SsrA-binding protein n=32 Tax=Bacteria RepID=SSR...   214   9e-55
UniRef50_A4J8T4 SsrA-binding protein n=14 Tax=Bacteria RepID=SSR...   213   1e-54
UniRef50_B1MEU3 SsrA-binding protein n=68 Tax=Bacteria RepID=SSR...   212   3e-54
UniRef50_B7IP12 SsrA-binding protein n=102 Tax=Bacteria RepID=SS...   212   4e-54
UniRef50_A0PYP8 SsrA-binding protein n=125 Tax=Bacteria RepID=SS...   211   6e-54
UniRef50_Q4JX42 SsrA-binding protein n=87 Tax=Bacteria RepID=SSR...   210   1e-53
UniRef50_Q2RLS9 SsrA-binding protein n=8 Tax=Clostridia RepID=SS...   210   2e-53
UniRef50_A1KN98 SsrA-binding protein n=62 Tax=Bacteria RepID=SSR...   209   4e-53
UniRef50_A5G3A5 SsrA-binding protein n=5 Tax=Bacteria RepID=SSRP...   208   5e-53
UniRef50_C9KNB2 SsrA-binding protein n=1 Tax=Mitsuokella multaci...   208   5e-53
UniRef50_A1TSJ4 SsrA-binding protein n=6 Tax=Proteobacteria RepI...   208   6e-53
UniRef50_Q12AT7 SsrA-binding protein n=8 Tax=Burkholderiales Rep...   207   8e-53
UniRef50_Q3JBU6 SsrA-binding protein n=47 Tax=Proteobacteria Rep...   206   2e-52
UniRef50_C8W8A6 SsrA-binding protein n=5 Tax=Coriobacteriaceae R...   206   2e-52
UniRef50_C7M112 SsrA-binding protein n=1 Tax=Acidimicrobium ferr...   206   2e-52
UniRef50_Q72DV1 SsrA-binding protein n=12 Tax=Bacteria RepID=SSR...   206   3e-52
UniRef50_Q2N9K0 SsrA-binding protein n=85 Tax=cellular organisms...   205   4e-52
UniRef50_Q03AJ7 SsrA-binding protein n=110 Tax=Bacteria RepID=SS...   204   8e-52
UniRef50_B8H482 SsrA-binding protein n=83 Tax=Proteobacteria Rep...   204   8e-52
UniRef50_D1BK11 SsrA-binding protein n=20 Tax=Bacteria RepID=D1B...   203   1e-51
UniRef50_A1WX40 SsrA-binding protein n=13 Tax=Gammaproteobacteri...   203   2e-51
UniRef50_C8PPG5 SsrA-binding protein n=1 Tax=Treponema vincentii...   202   2e-51
UniRef50_A1WPQ3 SsrA-binding protein n=5 Tax=Proteobacteria RepI...   202   3e-51
UniRef50_A8SP47 Putative uncharacterized protein n=2 Tax=Bacteri...   201   5e-51
UniRef50_Q1H274 SsrA-binding protein n=29 Tax=Bacteria RepID=SSR...   201   7e-51
UniRef50_B2V9T6 SsrA-binding protein n=7 Tax=Bacteria RepID=SSRP...   201   7e-51
UniRef50_A0LGB7 SsrA-binding protein n=7 Tax=Bacteria RepID=SSRP...   201   1e-50
UniRef50_B0TLG2 SsrA-binding protein n=12 Tax=Proteobacteria Rep...   200   1e-50
UniRef50_C4Z0S0 SsrA-binding protein n=22 Tax=Bacteria RepID=C4Z...   199   3e-50
UniRef50_A3ZLQ9 SsrA-binding protein n=2 Tax=Planctomycetaceae R...   199   4e-50
UniRef50_B2UY12 SsrA-binding protein n=24 Tax=Bacteria RepID=SSR...   197   7e-50
UniRef50_C1F4B8 SsrA-binding protein n=1 Tax=Acidobacterium caps...   197   8e-50
UniRef50_D2RBT7 SsrA-binding protein n=3 Tax=Bacteria RepID=D2RB...   197   9e-50
UniRef50_Q7UZP2 SsrA-binding protein n=33 Tax=cellular organisms...   195   4e-49
UniRef50_C0QVL0 SsrA-binding protein n=2 Tax=Brachyspira RepID=C...   195   4e-49
UniRef50_A7HGZ0 SsrA-binding protein n=8 Tax=Bacteria RepID=SSRP...   195   5e-49
UniRef50_B2S2D1 SsrA-binding protein n=2 Tax=Treponema pallidum ...   195   5e-49
UniRef50_D2R3D1 SsrA-binding protein n=1 Tax=Pirellula staleyi D...   194   9e-49
UniRef50_Q2GCW3 SsrA-binding protein n=2 Tax=Neorickettsia RepID...   193   1e-48
UniRef50_D1U5X0 SsrA-binding protein n=2 Tax=Desulfovibrio RepID...   193   2e-48
UniRef50_Q3ZZ31 SsrA-binding protein n=6 Tax=Bacteria RepID=SSRP...   192   3e-48
UniRef50_A5EXZ5 SsrA-binding protein n=4 Tax=Proteobacteria RepI...   192   4e-48
UniRef50_A9NF97 SsrA-binding protein n=1 Tax=Acholeplasma laidla...   191   5e-48
UniRef50_D2PSC9 SsrA-binding protein n=1 Tax=Kribbella flavida D...   191   7e-48
UniRef50_A6G542 SsrA-binding protein n=2 Tax=Proteobacteria RepI...   191   7e-48
UniRef50_A9G109 SsrA-binding protein n=1 Tax=Sorangium cellulosu...   190   1e-47
UniRef50_Q1IQ53 SsrA-binding protein n=1 Tax=Candidatus Koribact...   190   1e-47
UniRef50_Q7UH38 SsrA-binding protein n=1 Tax=Rhodopirellula balt...   189   2e-47
UniRef50_C1ZDG5 SsrA-binding protein n=1 Tax=Planctomyces limnop...   189   2e-47
UniRef50_D1NAK5 SsrA-binding protein n=1 Tax=Victivallis vadensi...   189   3e-47
UniRef50_Q04E23 SsrA-binding protein n=4 Tax=Lactobacillales Rep...   189   3e-47
UniRef50_B2ULK9 SsrA-binding protein n=3 Tax=Verrucomicrobia Rep...   188   4e-47
UniRef50_Q1GDQ2 SsrA-binding protein n=12 Tax=Rhodobacterales Re...   188   5e-47
UniRef50_Q254F5 SsrA-binding protein n=1 Tax=Chlamydophila felis...   188   6e-47
UniRef50_Q1MRU5 SsrA-binding protein n=5 Tax=Desulfovibrionales ...   187   1e-46
UniRef50_Q9Z8K1 SsrA-binding protein n=2 Tax=Chlamydophila pneum...   187   1e-46
UniRef50_Q02A69 SsrA-binding protein n=1 Tax=Candidatus Solibact...   186   2e-46
UniRef50_B2KCF8 SsrA-binding protein n=1 Tax=Elusimicrobium minu...   186   2e-46
UniRef50_A5FZS6 SsrA-binding protein n=11 Tax=Alphaproteobacteri...   186   2e-46
UniRef50_C2D8P0 TmRNA-binding protein n=2 Tax=Coriobacteriaceae ...   185   3e-46
UniRef50_A9BF44 SsrA-binding protein n=3 Tax=Bacteria RepID=SSRP...   184   8e-46
UniRef50_A6L927 SsrA-binding protein n=17 Tax=Bacteria RepID=SSR...   184   1e-45
UniRef50_C7JH78 Trans-translation helper factor SmpB n=8 Tax=Ace...   183   2e-45
UniRef50_Q6MQ46 SsrA-binding protein n=1 Tax=Bdellovibrio bacter...   183   2e-45
UniRef50_Q2S237 SsrA-binding protein n=1 Tax=Salinibacter ruber ...   183   2e-45
UniRef50_C6HYH8 SsrA-binding protein n=1 Tax=Leptospirillum ferr...   183   2e-45
UniRef50_Q83N13 SsrA-binding protein n=2 Tax=Tropheryma whipplei...   182   3e-45
UniRef50_B9XT05 SsrA-binding protein n=1 Tax=bacterium Ellin514 ...   182   4e-45
UniRef50_A6DIW5 SsrA-binding protein n=2 Tax=Bacteria RepID=A6DI...   182   5e-45
UniRef50_Q6MAG8 SsrA-binding protein n=4 Tax=Chlamydiales RepID=...   181   7e-45
UniRef50_D1VZH7 SsrA-binding protein n=1 Tax=Prevotella timonens...   180   9e-45
UniRef50_A0FD64 TmRNA-binding protein n=1 Tax=Coxiella endosymbi...   180   1e-44
UniRef50_C9LGK2 SsrA-binding protein n=8 Tax=Prevotella RepID=C9...   180   2e-44
UniRef50_B2GAM5 SsrA-binding protein n=4 Tax=Bacteria RepID=SSRP...   179   2e-44
UniRef50_B3DV24 TmRNA-binding protein n=1 Tax=Methylacidiphilum ...   179   3e-44
UniRef50_C9RKN3 SsrA-binding protein n=1 Tax=Fibrobacter succino...   179   4e-44
UniRef50_Q04TV5 SsrA-binding protein n=6 Tax=Leptospira RepID=SS...   177   1e-43
UniRef50_B7KVC8 SsrA-binding protein n=25 Tax=cellular organisms...   177   1e-43
UniRef50_C0JZT0 SsrA-binding protein n=1 Tax=uncultured bacteriu...   177   1e-43
UniRef50_A8EWH6 SsrA-binding protein n=48 Tax=Epsilonproteobacte...   176   2e-43
UniRef50_B1AI43 SsrA-binding protein n=16 Tax=Mycoplasmataceae R...   176   2e-43
UniRef50_C5JAN1 SsrA-binding protein n=1 Tax=uncultured bacteriu...   175   3e-43
UniRef50_Q3ARF1 SsrA-binding protein n=11 Tax=Chlorobiaceae RepI...   175   6e-43
UniRef50_Q2ST23 SsrA-binding protein n=4 Tax=Mollicutes RepID=SS...   174   8e-43
UniRef50_B8D947 SsrA-binding protein n=4 Tax=Buchnera aphidicola...   174   1e-42
UniRef50_A0M3P0 SsrA-binding protein n=13 Tax=Bacteroidetes RepI...   173   2e-42
UniRef50_B3EUI8 SsrA-binding protein n=4 Tax=Bacteroidetes RepID...   172   4e-42
UniRef50_B7GAQ2 Predicted protein (Fragment) n=3 Tax=Bacillariop...   171   7e-42
UniRef50_Q11TP3 SsrA-binding protein n=36 Tax=Bacteroidetes RepI...   168   5e-41
UniRef50_P75043 SsrA-binding protein n=2 Tax=Mycoplasma RepID=SS...   165   4e-40
UniRef50_B1GZD8 SsrA-binding protein SmpB n=1 Tax=uncultured Ter...   164   9e-40
UniRef50_Q6Q8U8 Predicted SsrA n=1 Tax=uncultured marine gamma p...   163   1e-39
UniRef50_C6X237 TmRNA-binding protein SmpB n=2 Tax=Flavobacteria...   162   5e-39
UniRef50_Q89AM9 SsrA-binding protein n=1 Tax=Buchnera aphidicola...   161   7e-39
UniRef50_B1VAG4 SsrA-binding protein n=2 Tax=Candidatus Phytopla...   161   7e-39
UniRef50_UPI00016992A0 SsrA-binding protein n=1 Tax=Endoriftia p...   161   9e-39
UniRef50_Q0SPD1 SsrA-binding protein n=20 Tax=Borrelia RepID=SSR...   159   2e-38
UniRef50_Q7VRQ2 TmRNA-binding protein n=2 Tax=Candidatus Blochma...   157   1e-37
UniRef50_Q1LSR7 SsrA-binding protein n=17 Tax=Gammaproteobacteri...   154   1e-36
UniRef50_A5KSW6 SsrA-binding protein n=2 Tax=candidate division ...   154   1e-36
UniRef50_Q601U1 SsrA-binding protein n=3 Tax=Mycoplasma hyopneum...   153   1e-36
UniRef50_Q6YR70 SsrA-binding protein n=3 Tax=Candidatus Phytopla...   153   2e-36
UniRef50_Q6KI26 SsrA-binding protein n=1 Tax=Mycoplasma mobile R...   150   2e-35
UniRef50_B3PM30 SsrA-binding protein n=2 Tax=Mycoplasma RepID=B3...   149   4e-35
UniRef50_A9G6R4 SmpB-like protein n=1 Tax=Sorangium cellulosum '...   149   4e-35
UniRef50_Q7NB37 SsrA-binding protein n=1 Tax=Mycoplasma gallisep...   148   7e-35
UniRef50_C1D1M8 Putative SsrA-binding protein n=1 Tax=Deinococcu...   145   5e-34
UniRef50_Q057R8 TmRNA-binding protein n=1 Tax=Buchnera aphidicol...   143   2e-33
UniRef50_A5IZI0 SsrA-binding protein n=3 Tax=Mycoplasma RepID=SS...   141   9e-33
UniRef50_Q8D389 SmpB protein n=1 Tax=Wigglesworthia glossinidia ...   136   3e-31
UniRef50_A8Z637 SsrA (TmRNA)-binding protein n=2 Tax=Candidatus ...   133   2e-30
UniRef50_Q4A5T2 SsrA-binding protein n=2 Tax=Mycoplasma RepID=SS...   127   2e-28
UniRef50_D0N0I1 Putative uncharacterized protein n=1 Tax=Phytoph...   125   6e-28
UniRef50_C6SHY7 SsrA-binding protein n=1 Tax=Neisseria meningiti...   118   7e-26
UniRef50_C7LKD3 SsrA (TmRNA)-binding protein n=1 Tax=Candidatus ...    91   1e-17
UniRef50_Q7P475 Small protein B n=1 Tax=Fusobacterium nucleatum ...    83   2e-15
UniRef50_UPI0001912596 SsrA-binding protein n=1 Tax=Salmonella e...    62   6e-09

Sequences not found previously or not previously below threshold:

UniRef50_Q05FT0 Putative uncharacterized protein n=1 Tax=Candida...    42   0.005


CONVERGED!
>UniRef50_Q3MAP3 SsrA-binding protein n=12 Tax=Cyanobacteria RepID=SSRP_ANAVT
          Length = 155

 Score =  224 bits (573), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 72/155 (46%), Positives = 96/155 (61%)

Query: 4   KKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEA 63
                     I  N++AR+ Y I E FEAG+ L G EVKS+RAGK N+ D Y LLRDGE 
Sbjct: 1   MSDKSESYKVITDNRQARYLYEILETFEAGIQLTGTEVKSIRAGKVNLQDGYALLRDGEI 60

Query: 64  FLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWC 123
           +L  A+I+P   +  +   +P RTRKLLL+++E+  L G+V ++G T+V L +Y K  W 
Sbjct: 61  WLINAHISPYNASGQYFNHEPRRTRKLLLHRQEIRKLIGKVEQQGLTLVPLKMYLKRGWV 120

Query: 124 KVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
           KV I + KGKK HDKR  +K R+ Q D  R MKN 
Sbjct: 121 KVSIALGKGKKLHDKRESLKRRQDQRDIQRAMKNY 155


>UniRef50_B5F2A0 SsrA-binding protein n=362 Tax=Proteobacteria RepID=SSRP_SALA4
          Length = 160

 Score =  223 bits (570), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 151/160 (94%), Positives = 157/160 (98%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANI DSYV+L+D
Sbjct: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANIGDSYVILKD 60

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GEA+LFGAN TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGR+NREGYTVVALSLYWKN
Sbjct: 61  GEAWLFGANFTPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRINREGYTVVALSLYWKN 120

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           AWCKVKIGVAKGKKQHDKRSD+KEREWQ+DKARIMKNA R
Sbjct: 121 AWCKVKIGVAKGKKQHDKRSDLKEREWQLDKARIMKNAGR 160


>UniRef50_A5UPS2 SsrA-binding protein n=171 Tax=Bacteria RepID=SSRP_ROSS1
          Length = 158

 Score =  222 bits (566), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 71/150 (47%), Positives = 102/150 (68%)

Query: 11  SATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI 70
              +A N++ARH+YFIEE +EAG+AL G E+KS+RAG+ N+   YV + DGEA+L+  +I
Sbjct: 8   ERVVADNRKARHDYFIEETYEAGIALTGSEIKSIRAGQVNLRGGYVRIVDGEAWLYDVHI 67

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVA 130
            P   +  +   +PTR RKLLL++RE+  + G+V R+GYT+V L LY +    KV+IG+A
Sbjct: 68  APYEQSGAYFNHEPTRPRKLLLHRREISRIAGQVERQGYTLVPLRLYLRGRRAKVEIGLA 127

Query: 131 KGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           +GKK +DKR DI  RE + D  R +K   R
Sbjct: 128 RGKKLYDKRDDIARREARRDIERALKERTR 157


>UniRef50_A3PWV5 SsrA-binding protein n=83 Tax=cellular organisms RepID=SSRP_MYCSJ
          Length = 168

 Score =  216 bits (551), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 59/155 (38%), Positives = 93/155 (60%), Gaps = 1/155 (0%)

Query: 6   AHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFL 65
                +  +A N+RARH Y I + +EAG+AL G EVKSLR G+A+++D++  + DGE +L
Sbjct: 12  TKDRNNQVVASNRRARHNYAILDTYEAGIALMGTEVKSLRDGQASLADAFATVDDGEIWL 71

Query: 66  FGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKV 125
              +I      S      P R RKLLL++RE+D+L G++     T+V LSLY+     KV
Sbjct: 72  RNLHIPEYQHGS-WTNHAPRRNRKLLLHRREIDNLIGKIRDGNLTLVPLSLYFTGGKVKV 130

Query: 126 KIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           ++ +A+GK+ HDKR D+  R+ + +  R +    +
Sbjct: 131 ELALARGKQAHDKRQDLARRDAEREVVRELGRRAK 165


>UniRef50_A0QU63 SsrA-binding protein n=25 Tax=Bacteria RepID=SSRP_MYCS2
          Length = 161

 Score =  214 bits (546), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 60/160 (37%), Positives = 98/160 (61%), Gaps = 2/160 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           MTKK A    +  +A N++ARH Y I + +EAG+ L G EVKSLR G+A+++D++  + D
Sbjct: 1   MTKKSAS-SNNKVVATNRKARHNYTILDTYEAGIVLMGTEVKSLREGQASLADAFATVDD 59

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GE +L   +I       T     P R RKLLL+++++D+L G++     T+V LS+Y+ +
Sbjct: 60  GEIWLRNVHIAEYHHG-TWTNHAPRRNRKLLLHRKQIDNLIGKIRDGNLTLVPLSIYFTD 118

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
              KV++ +A+GK+ HDKR D+  R+ Q +  R +    +
Sbjct: 119 GKVKVELALARGKQAHDKRQDLARRDAQREVIRELGRRAK 158


>UniRef50_A9WJ45 SsrA-binding protein n=32 Tax=Bacteria RepID=SSRP_CHLAA
          Length = 160

 Score =  214 bits (545), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 71/159 (44%), Positives = 100/159 (62%), Gaps = 2/159 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           MT  K   PG   +A N++ARH+Y IEE  EAG+ L G E+KS+RAG+ N+  S+  + D
Sbjct: 1   MTATKHKHPG--VVAENRKARHDYDIEETIEAGIVLSGSEIKSVRAGRVNLRGSFARVID 58

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
            E FL+ A+I P   +  +   DP R RKLLL++RE++ L G V  +G T+V L +Y+K 
Sbjct: 59  DEVFLYDAHIAPYEQSGKYFNHDPMRPRKLLLHRREINRLNGLVRMKGMTLVPLKVYFKG 118

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
              KV++GVA+GKK +DKR DI  R+   D  R +K A 
Sbjct: 119 RRAKVELGVARGKKIYDKREDIARRDAARDIDRALKRAR 157


>UniRef50_A4J8T4 SsrA-binding protein n=14 Tax=Bacteria RepID=SSRP_DESRM
          Length = 161

 Score =  213 bits (544), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 65/161 (40%), Positives = 101/161 (62%), Gaps = 2/161 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M  K   + G  TI  N+RARHEY + E +EAG+AL G EVKSLRAGKAN+ D++  + +
Sbjct: 1   MAAKATSEKGFKTITDNRRARHEYHVIETYEAGIALSGTEVKSLRAGKANLQDAFARVEN 60

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK- 119
           GE  L+  +I+P    +     +P RTR+LL++++E+  LYG+V  +G  ++ L +Y+  
Sbjct: 61  GEMMLYNLHISPYEQGN-RFNHEPKRTRRLLMHKQEILRLYGKVREKGLALIPLKVYFNP 119

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
               KV++ +A+GKK +DKR DI  R+ + D  R M+   +
Sbjct: 120 RGKVKVQLALAQGKKSYDKRHDIAARDAKRDMDRAMRERQK 160


>UniRef50_B1MEU3 SsrA-binding protein n=68 Tax=Bacteria RepID=SSRP_MYCA9
          Length = 159

 Score =  212 bits (541), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 63/160 (39%), Positives = 95/160 (59%), Gaps = 3/160 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M+KK A   G   IA N++ARH Y I + +EAG+ L G EVK+LR GKA++ D++  + D
Sbjct: 1   MSKKPAD--GRKVIATNRKARHNYSIIDVYEAGVQLVGTEVKTLREGKASLVDAFATVDD 58

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GE +L G +I       T     P R RKLLL++ ++D L G+      T+V LSLY+ +
Sbjct: 59  GEVWLRGVHIPQYDHG-TWTNHAPLRNRKLLLHRAQIDMLVGKTRDGNLTLVPLSLYFLD 117

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
              KV++ +A+GK+ HDKR DI +R+   +  R +    +
Sbjct: 118 GKVKVELALARGKQAHDKRQDIAKRDASREITRELGRRAK 157


>UniRef50_B7IP12 SsrA-binding protein n=102 Tax=Bacteria RepID=SSRP_BACC2
          Length = 155

 Score =  212 bits (540), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 67/153 (43%), Positives = 101/153 (66%), Gaps = 1/153 (0%)

Query: 8   KPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFG 67
           K     IA NK+A H+YFIEE +EAGL LQG E+KS+RAG+ N+ D++  + +GE ++  
Sbjct: 3   KGTGKVIAQNKKAFHDYFIEETYEAGLVLQGTEIKSIRAGRVNLKDAFARIHNGEVWVHN 62

Query: 68  ANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKI 127
            +I      +     DP RTRKLLL+++E+D L G     GY +V L +Y KN + K+ +
Sbjct: 63  MHINTYEQGN-RFNHDPLRTRKLLLHKKEIDKLAGAAKETGYALVPLRIYLKNGFAKMAL 121

Query: 128 GVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           G+AKGKKQ+DKR D+KE+E + + AR+ ++  +
Sbjct: 122 GLAKGKKQYDKRHDLKEKEAKREIARVFRDRQK 154


>UniRef50_A0PYP8 SsrA-binding protein n=125 Tax=Bacteria RepID=SSRP_CLONN
          Length = 157

 Score =  211 bits (538), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 74/160 (46%), Positives = 103/160 (64%), Gaps = 4/160 (2%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M KK      + T+A N++A H+YFIEE FEAG+AL G EVKS+R GKAN+ DSY  +R+
Sbjct: 1   MGKKDKK---NNTLAQNRKAYHDYFIEETFEAGIALVGTEVKSIRGGKANLKDSYASIRN 57

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GE F+   +++P    +     DP R RKLLL++ ++++L G   ++GYT++ LSLY KN
Sbjct: 58  GEVFVCNMHVSPYEQGNI-FNRDPLRERKLLLHKSQINTLLGYTAQQGYTLIPLSLYLKN 116

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
              KV +GVAKGKK +DKR  I  +  + D  R MK   R
Sbjct: 117 GRVKVALGVAKGKKNYDKRDAIAAKAAKRDIDRQMKERMR 156


>UniRef50_Q4JX42 SsrA-binding protein n=87 Tax=Bacteria RepID=SSRP_CORJK
          Length = 184

 Score =  210 bits (536), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 62/155 (40%), Positives = 94/155 (60%), Gaps = 1/155 (0%)

Query: 6   AHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFL 65
               G   +A N++ARH+Y I + +E G+ L G EVKSLR GKA++ D+Y  + +GE +L
Sbjct: 27  QKGAGQIVVATNRKARHDYHIIDTYECGVVLVGTEVKSLREGKASLVDAYATIDEGEVWL 86

Query: 66  FGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKV 125
            G +I   ++        P RTRKLLL++RE+DSL G+V     T+V L LY+     KV
Sbjct: 87  RGLHIPEYSMGH-WTNHSPRRTRKLLLHRREIDSLMGKVRDGNNTLVPLQLYFVAGKLKV 145

Query: 126 KIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           ++ +A+GK+++DKR DIK R  + +  R M    +
Sbjct: 146 ELALARGKQEYDKRQDIKRRTEEREITREMGRRIK 180


>UniRef50_Q2RLS9 SsrA-binding protein n=8 Tax=Clostridia RepID=SSRP_MOOTA
          Length = 155

 Score =  210 bits (535), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 62/150 (41%), Positives = 95/150 (63%), Gaps = 2/150 (1%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             +  N+RARH+YFIEE +EAG+AL G EVKSLR G+ANI DSY  + +GE  L   +I+
Sbjct: 6   KVVTDNRRARHDYFIEETYEAGIALTGTEVKSLRNGRANIKDSYARVENGELILHDMHIS 65

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NAWCKVKIGVA 130
           P    +     +P R R+LL+++ E+  LYG+V  +G T++ L +Y+      KV++ + 
Sbjct: 66  PYEQGN-RFNHEPRRPRRLLMHRYEIQRLYGKVREKGLTLIPLKVYFNERGLAKVELALV 124

Query: 131 KGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           KGK+ +DKR DI  R+ Q + AR ++   +
Sbjct: 125 KGKRLYDKREDIAARDAQREIARALRERQK 154


>UniRef50_A1KN98 SsrA-binding protein n=62 Tax=Bacteria RepID=SSRP_MYCBP
          Length = 160

 Score =  209 bits (532), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 63/156 (40%), Positives = 98/156 (62%), Gaps = 1/156 (0%)

Query: 5   KAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAF 64
           K+ + G   +A N++ARH Y I E FEAG+ALQG EVKSLR G+A+++DS+  + DGE +
Sbjct: 3   KSSRGGRQIVASNRKARHNYSIIEVFEAGVALQGTEVKSLREGQASLADSFATIDDGEVW 62

Query: 65  LFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCK 124
           L  A+I      S     +P R RKLLL++R++D+L G++    + +V LSLY+     K
Sbjct: 63  LRNAHIPEYRHGS-WTNHEPRRNRKLLLHRRQIDTLVGKIREGNFALVPLSLYFAEGKVK 121

Query: 125 VKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           V++ +A+GK+  DKR D+  R+ Q +  R +    +
Sbjct: 122 VELALARGKQARDKRQDMARRDAQREVLRELGRRAK 157


>UniRef50_A5G3A5 SsrA-binding protein n=5 Tax=Bacteria RepID=SSRP_GEOUR
          Length = 151

 Score =  208 bits (530), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 72/151 (47%), Positives = 106/151 (70%), Gaps = 1/151 (0%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
               I  NK+A H+YFIEE+FEAG+ L+G EVKSLR GKAN++DS+ L+++GEAFL   +
Sbjct: 2   SEKLICNNKKAYHDYFIEEKFEAGMVLKGTEVKSLRIGKANLNDSFALVKNGEAFLHNLH 61

Query: 70  ITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGV 129
           I+P    +     DP R RKLLL+++E+  L+  +  +GYTVV L LY+K+   KV++G+
Sbjct: 62  ISPYDFGN-RENHDPDRMRKLLLHKKEIGKLFSMIREQGYTVVPLRLYFKDGLVKVEVGL 120

Query: 130 AKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           AKGKK +DKR D+K+++ + D A  +K  +R
Sbjct: 121 AKGKKLYDKREDMKKKDMRRDVAVALKERNR 151


>UniRef50_C9KNB2 SsrA-binding protein n=1 Tax=Mitsuokella multacida DSM 20544
           RepID=C9KNB2_9FIRM
          Length = 157

 Score =  208 bits (530), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 1/155 (0%)

Query: 6   AHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFL 65
               G  T+  N++ARH+YFI E +EAG+ALQG EVKSLRAG+AN+ DSY  +++GE F+
Sbjct: 3   RKNAGIKTVCENRKARHDYFIHETYEAGIALQGTEVKSLRAGRANLKDSYASIQNGEIFV 62

Query: 66  FGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKV 125
              +I+P    +     DP R RKLL+++ E+  L+ +   +G+T+V L +Y+K    K+
Sbjct: 63  ENLHISPYDQGNI-FNHDPLRRRKLLMHKAEIVKLFAKTREKGFTLVPLKIYFKQGRAKM 121

Query: 126 KIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           +I +A GK  +DKR D+ E+  + +  R +K+  R
Sbjct: 122 EIALASGKHNYDKRQDLHEKAAKREIERALKDRQR 156


>UniRef50_A1TSJ4 SsrA-binding protein n=6 Tax=Proteobacteria RepID=SSRP_ACIAC
          Length = 157

 Score =  208 bits (530), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 78/160 (48%), Positives = 104/160 (65%), Gaps = 3/160 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M KK         IA NK+A   YF EE  EAG+ L GWEVK+LR GK  ++D YV++R+
Sbjct: 1   MAKKPETLSR---IADNKKAAFNYFFEERHEAGMVLHGWEVKALREGKVQLTDGYVVIRE 57

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GE +L G  I P+  ASTHV  D  RT+KLLL++ E+  L  +V ++GYT+V L+L+W N
Sbjct: 58  GELYLIGCQINPLKTASTHVSPDAVRTKKLLLHKDEIKRLTAKVEQKGYTLVPLNLHWTN 117

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
              K +I +AKGK +HDKR  IKERE + +  R MK+ HR
Sbjct: 118 GRAKCEIALAKGKAEHDKRDTIKEREGKREVERAMKSRHR 157


>UniRef50_Q12AT7 SsrA-binding protein n=8 Tax=Burkholderiales RepID=SSRP_POLSJ
          Length = 149

 Score =  207 bits (528), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 73/147 (49%), Positives = 103/147 (70%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           IA NK+A   Y IEE FEAG+ L+GWEVKS+R GK  ++D YV++R GE F+ G  I P+
Sbjct: 3   IADNKKAIFNYHIEERFEAGMVLEGWEVKSVREGKVQLTDGYVVIRGGELFIIGCQINPL 62

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGK 133
             ASTHV  D  RT+KLL+++ E+  L G+V ++G+T+V L+++WK    K +IG+AKGK
Sbjct: 63  GTASTHVRPDSVRTKKLLMHKDEIRRLVGKVEQKGFTLVPLNMHWKAGKVKCEIGLAKGK 122

Query: 134 KQHDKRSDIKEREWQVDKARIMKNAHR 160
            +HDKR  IK+RE + +  R MK+  R
Sbjct: 123 GEHDKRDTIKDREGKREVERAMKSRSR 149


>UniRef50_Q3JBU6 SsrA-binding protein n=47 Tax=Proteobacteria RepID=SSRP_NITOC
          Length = 189

 Score =  206 bits (526), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 77/145 (53%), Positives = 109/145 (75%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             IALN++ARH+YFIEE +EAGL L+GWEVKSLRAG+  +++ Y LL+ GE +LFG +++
Sbjct: 14  NVIALNRKARHDYFIEERYEAGLVLEGWEVKSLRAGRVQLNEGYCLLKGGEVWLFGVHLS 73

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
           P+   STH+  DP RTRKLLL+ +EL  L G V R+GY ++ L+LYWK    K++I +AK
Sbjct: 74  PLNTVSTHIHPDPLRTRKLLLHAKELRKLIGAVERKGYALIPLTLYWKRGRVKLEIALAK 133

Query: 132 GKKQHDKRSDIKEREWQVDKARIMK 156
           GK+++DKR+  KE+EW   K R++K
Sbjct: 134 GKQKYDKRATEKEKEWTRQKERLLK 158


>UniRef50_C8W8A6 SsrA-binding protein n=5 Tax=Coriobacteriaceae RepID=C8W8A6_ATOPD
          Length = 161

 Score =  206 bits (526), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 61/161 (37%), Positives = 98/161 (60%), Gaps = 2/161 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M + +  + G  +IA N+ ARHEY I E FE GL L G EVKSLR     ++D++ L+RD
Sbjct: 1   MAENQVKQQGKKSIARNRSARHEYEIGETFECGLVLTGTEVKSLRERGCQLTDTFCLIRD 60

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-K 119
           GEA++ G ++ P          DP R RKLLL++R++D L G++ ++G  +V L +Y+ +
Sbjct: 61  GEAWIHGMHLHPYTNGGVW-NVDPDRKRKLLLHRRQIDYLDGKLRQKGLALVPLEIYFDE 119

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           +   K+ I +++GKK +DKR+   +R+   +  R +K   R
Sbjct: 120 HNRVKLLIALSQGKKLYDKRASAAKRDSDREIQRALKERSR 160


>UniRef50_C7M112 SsrA-binding protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331
           RepID=C7M112_ACIFD
          Length = 171

 Score =  206 bits (526), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 63/159 (39%), Positives = 96/159 (60%), Gaps = 1/159 (0%)

Query: 2   TKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDG 61
             K     G   +A N+RARH+Y + E FEAG+ L G EVK++R G   + D+Y  +RDG
Sbjct: 8   PAKAQQLGGVRVLAQNRRARHDYDVLETFEAGIVLVGSEVKAVREGHVQLRDAYARIRDG 67

Query: 62  EAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNA 121
           E FLF A I+P   A+        R RKLLL++ E+D L GR+ +E  T++ LSLY ++ 
Sbjct: 68  ELFLFQAVISPYRHATGFGTHVTDRPRKLLLHRDEIDRLRGRLEQERLTLIPLSLYLRDG 127

Query: 122 WCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
             KV++ +AKG+  +DKR  +  R+ Q +  R +++ +R
Sbjct: 128 LVKVELALAKGRTLYDKRHVLATRDAQREVER-LRSRYR 165


>UniRef50_Q72DV1 SsrA-binding protein n=12 Tax=Bacteria RepID=SSRP_DESVH
          Length = 154

 Score =  206 bits (524), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 74/158 (46%), Positives = 95/158 (60%), Gaps = 4/158 (2%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M+KK    PG+  IA NK+ARH Y + +  EAG++L G EVKSLRAG  N  DSYV  R+
Sbjct: 1   MSKKA---PGANVIAQNKKARHIYELSDNHEAGISLTGSEVKSLRAGHVNFRDSYVDFRN 57

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GEAFL G +I P   A  +   DP R RKLLL+  E+++L   V ++GYTVV   LY+  
Sbjct: 58  GEAFLVGLHIAPYDNAG-YAQHDPDRDRKLLLHAHEIENLARSVEQKGYTVVPTKLYFAR 116

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
              KV I V +GKK HD+R D+K R    D  R +   
Sbjct: 117 GKVKVDIAVGRGKKLHDQREDLKRRAEDRDTQRELARF 154


>UniRef50_Q2N9K0 SsrA-binding protein n=85 Tax=cellular organisms RepID=SSRP_ERYLH
          Length = 160

 Score =  205 bits (523), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 75/160 (46%), Positives = 110/160 (68%), Gaps = 3/160 (1%)

Query: 1   MTKKKAHK-PGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLR 59
           M + K        T+A N+RAR +Y +E++FEAG+ALQG EVK+LRAG+A+I++SY  +R
Sbjct: 1   MARPKPETFDKQKTVAENRRARFDYAVEDKFEAGIALQGTEVKALRAGEASIAESYAEVR 60

Query: 60  DGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK 119
           DGEA+L  ANI   +  +  +   P R RKLLL+ RE++ L G V R+G T+V LS+Y+ 
Sbjct: 61  DGEAWLINANIPEYSHGN-RLNHQPRRPRKLLLHNREIERLLGAVERKGMTLVPLSIYFN 119

Query: 120 -NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
                KV++ +AKG++  DKR  IK+R+W+ DKARIM++ 
Sbjct: 120 SRGRAKVELALAKGRQAQDKREYIKDRDWKRDKARIMRDK 159


>UniRef50_Q03AJ7 SsrA-binding protein n=110 Tax=Bacteria RepID=SSRP_LACC3
          Length = 157

 Score =  204 bits (520), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 64/159 (40%), Positives = 97/159 (61%), Gaps = 2/159 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M KK   KP    +A NK+A H+Y I + +EAG+AL G E+KS+R GK N+ D +  +R+
Sbjct: 1   MAKKHRQKP-DNLLAQNKKAGHDYNILDTYEAGIALTGTEIKSVRDGKLNLRDGFARIRN 59

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
            EA+L   +I+P    +     DP R RKLLL++RE+  L     R+G T+V L +Y K+
Sbjct: 60  NEAWLENVHISPYKEGNL-FNVDPMRNRKLLLHKREIRKLGQMTARQGVTLVPLRMYLKH 118

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
            + KV IGVA+GK  +DKR  +K ++ + +  R +K  +
Sbjct: 119 GYAKVLIGVAEGKHNYDKRETLKRKDQEREVQRALKARY 157


>UniRef50_B8H482 SsrA-binding protein n=83 Tax=Proteobacteria RepID=SSRP_CAUCN
          Length = 152

 Score =  204 bits (520), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 77/147 (52%), Positives = 99/147 (67%), Gaps = 2/147 (1%)

Query: 11  SATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI 70
           S  IA N+RAR +YFIEE FEAG+ L G EVKSLR G+ANI++SY  +   E  L  A+I
Sbjct: 2   SKPIAENRRARFDYFIEETFEAGIMLTGTEVKSLRTGRANIAESYASVEGREIVLINADI 61

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NAWCKVKIGV 129
            P   A+     +P R RKLLL++R++D L G V REG T+V + LYW      K+++G+
Sbjct: 62  PPYGHAN-RFNHEPRRHRKLLLHRRQIDKLIGAVQREGRTLVPIKLYWNDKGLAKLEVGL 120

Query: 130 AKGKKQHDKRSDIKEREWQVDKARIMK 156
           AKGKK HDKR    ER+WQ DKAR+MK
Sbjct: 121 AKGKKLHDKRDTAAERDWQRDKARLMK 147


>UniRef50_D1BK11 SsrA-binding protein n=20 Tax=Bacteria RepID=D1BK11_SANKS
          Length = 176

 Score =  203 bits (518), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 62/155 (40%), Positives = 98/155 (63%), Gaps = 1/155 (0%)

Query: 4   KKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEA 63
             +  P  A IA NK+ARH++ IE+ FEAG+ L G EVK+LRAG+A++ D YV +   EA
Sbjct: 20  PASSGPVRALIASNKKARHDFAIEDVFEAGMVLSGTEVKALRAGRASLVDGYVNIEGNEA 79

Query: 64  FLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWC 123
           +L GA+I+  A   T     P R RKLLL++ E++ L      +G+T+V L +Y+ +   
Sbjct: 80  WLEGAHISEYAHG-TWTNHAPRRKRKLLLHRSEIERLAQGTREKGFTIVPLQMYFLDGRA 138

Query: 124 KVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
           KV+I +A+GKK++DKR  ++E++   +  R ++  
Sbjct: 139 KVEIALARGKKEYDKRQTLREQQDNREAHRAIRQR 173


>UniRef50_A1WX40 SsrA-binding protein n=13 Tax=Gammaproteobacteria RepID=SSRP_HALHL
          Length = 165

 Score =  203 bits (517), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 87/154 (56%), Positives = 121/154 (78%)

Query: 5   KAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAF 64
           K+ K     IALN++A  ++F+EE  EAGLAL+GWEVK+LRA + N+++S+VL+R GEA+
Sbjct: 10  KSKKTEGNVIALNRKAGFDFFVEERLEAGLALEGWEVKALRAKRVNLTESHVLVRRGEAW 69

Query: 65  LFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCK 124
           L G NITP++ ASTH+  DPTRTRKLLL++RE++ L G V+R+GYTVV L LYWK    K
Sbjct: 70  LIGCNITPLSTASTHIHPDPTRTRKLLLHRREINRLIGAVDRDGYTVVPLKLYWKRGRAK 129

Query: 125 VKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
           ++IGVAKGKK+ DKR+D KE++WQ  + R++K+ 
Sbjct: 130 IEIGVAKGKKKQDKRADKKEQDWQRQRERLLKHK 163


>UniRef50_C8PPG5 SsrA-binding protein n=1 Tax=Treponema vincentii ATCC 35580
           RepID=C8PPG5_9SPIO
          Length = 200

 Score =  202 bits (516), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 88/149 (59%), Gaps = 1/149 (0%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             IA NK+A  +Y IEE  E G+ALQG E+KS+R G+ +  DS+  +   E +L   +I+
Sbjct: 53  KIIAKNKKAHFDYSIEETIECGIALQGTEIKSVRDGRISFPDSFAEIIRNEVWLKNFHIS 112

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
               +S     DP R +KLLL++ E+  L  +   +GYT++ L  Y K    KV +G+ K
Sbjct: 113 EYVYSSI-FNHDPDRPKKLLLHKDEIKRLTRKTEEKGYTLIPLEFYLKRGRIKVMLGICK 171

Query: 132 GKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           GKKQ DKR+DIKER+ + D  R +   +R
Sbjct: 172 GKKQFDKRADIKERDIKRDMQRELHLKNR 200


>UniRef50_A1WPQ3 SsrA-binding protein n=5 Tax=Proteobacteria RepID=SSRP_VEREI
          Length = 157

 Score =  202 bits (516), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 81/160 (50%), Positives = 111/160 (69%), Gaps = 3/160 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           MTKK         IA NK+A H+YF+EE +EAG+ L GWEVK+LRAGKA ++D YVL+RD
Sbjct: 1   MTKKPDPASR---IADNKKAAHDYFLEERYEAGMVLHGWEVKALRAGKAQLTDGYVLIRD 57

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GE FL G  +  +  ASTHV  +  RT+KLLL + ++  L G+V ++GYT+V L+L+WKN
Sbjct: 58  GELFLLGCQLQALKTASTHVSPEAARTKKLLLKKDDIRRLIGKVEQKGYTLVPLNLHWKN 117

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
              K +I +A+GK QHDKR+ IKERE + +  R +K+  R
Sbjct: 118 GVVKCEIALARGKAQHDKRNSIKEREGKREVERALKSRSR 157


>UniRef50_A8SP47 Putative uncharacterized protein n=2 Tax=Bacteria
           RepID=A8SP47_9FIRM
          Length = 156

 Score =  201 bits (513), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 66/155 (42%), Positives = 104/155 (67%), Gaps = 1/155 (0%)

Query: 6   AHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFL 65
           + + G+  IA NK+A HEYFIEE+FEAG+ L G EVKS+R G  +I +++V +  GE ++
Sbjct: 2   SKERGNTLIANNKKAYHEYFIEEKFEAGIELVGTEVKSIRQGHCSIKEAFVGIDHGEVYV 61

Query: 66  FGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKV 125
           +  N+ P    +     DP RTRKLLL++ E++ L G+   +GYT++ L +Y K+   K+
Sbjct: 62  YRMNVNPYERGNI-FNKDPLRTRKLLLHRYEINKLIGQQKVKGYTIMPLKVYIKDGLVKM 120

Query: 126 KIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           +IG+AKGKK +DKR DI +++ + +  R +KN +R
Sbjct: 121 EIGLAKGKKLYDKREDIAKKDMKREMERDLKNRNR 155


>UniRef50_Q1H274 SsrA-binding protein n=29 Tax=Bacteria RepID=SSRP_METFK
          Length = 154

 Score =  201 bits (512), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 69/147 (46%), Positives = 107/147 (72%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           IA NK+A H+YFIEE++EAG+ L+GWEVK++R  +  + ++YV+++ GE +L G ++TP+
Sbjct: 3   IAQNKKAFHDYFIEEKYEAGIVLEGWEVKAIRENRVQLKEAYVIIQRGEIYLIGCHVTPL 62

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGK 133
             ASTHV  D  RTRKLLL+  ++  L G+V R GYT+V L +++     KV+IG+AKGK
Sbjct: 63  GSASTHVRPDAIRTRKLLLHSEQIAKLIGKVERAGYTLVPLDMHYTRGRIKVQIGLAKGK 122

Query: 134 KQHDKRSDIKEREWQVDKARIMKNAHR 160
           KQ+DKR   KE++W+ +++ +MK   +
Sbjct: 123 KQYDKRHSEKEKDWKREQSSLMKKYVK 149


>UniRef50_B2V9T6 SsrA-binding protein n=7 Tax=Bacteria RepID=SSRP_SULSY
          Length = 152

 Score =  201 bits (512), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 64/151 (42%), Positives = 98/151 (64%), Gaps = 1/151 (0%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
               +A NK+A H+Y I E++EAG+ L G EVKSLR G  N+ DS+V++ DGEA+L+   
Sbjct: 2   SEKVVATNKKAFHDYAILEKYEAGIVLTGSEVKSLREGACNLKDSFVMIEDGEAWLYNCY 61

Query: 70  ITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGV 129
           I P   A+     DPTR RKLLL+++E+  L G+V  +G T+V L +Y+KN   KV+I +
Sbjct: 62  IAPYKPAAK-FGHDPTRKRKLLLHKKEILKLMGKVKEKGLTIVPLRVYFKNGKAKVEIAL 120

Query: 130 AKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           AKGK +++KR  +KE++ + +  +  K   +
Sbjct: 121 AKGKVKYEKREAMKEKDMKREIEKSFKGKIK 151


>UniRef50_A0LGB7 SsrA-binding protein n=7 Tax=Bacteria RepID=SSRP_SYNFM
          Length = 161

 Score =  201 bits (511), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 68/161 (42%), Positives = 96/161 (59%), Gaps = 2/161 (1%)

Query: 1   MTK-KKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLR 59
           MTK K +    +  I  NK+A H+Y I E+FEAG+ L G EVKSLR G+AN+ DSY  +R
Sbjct: 1   MTKNKPSTAEKTRLICQNKKAYHDYDILEKFEAGIVLLGTEVKSLREGRANLKDSYARVR 60

Query: 60  DGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK 119
            GE FL G +I+P   AS +   +P R RKLLL+  E+  L G+    G  ++ L LY+ 
Sbjct: 61  KGEVFLQGLHISPYTHAS-YNNHEPERVRKLLLHAHEIKRLTGKTQERGLALIPLKLYFS 119

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
               KV++ +A+GKK +DKR  IK +E   +  R+ K   +
Sbjct: 120 KGKVKVELALAQGKKLYDKRESIKRKEENRELDRLRKRRRQ 160


>UniRef50_B0TLG2 SsrA-binding protein n=12 Tax=Proteobacteria RepID=SSRP_SHEHH
          Length = 164

 Score =  200 bits (509), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 94/160 (58%), Positives = 123/160 (76%), Gaps = 3/160 (1%)

Query: 1   MTKK--KAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLL 58
           M KK  K  K  SA+IA NKRA  +Y  EE+ EAGL+L GWEVKS+R GK N+S+SYV L
Sbjct: 1   MAKKNAKNSKNSSASIARNKRATFDYKFEEKLEAGLSLMGWEVKSIRMGKVNLSESYVFL 60

Query: 59  RDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW 118
           R+GEA+LFG  I P+  AS+HVVCDP R+RKLLL ++ELD L G V+R+GY++V +S+YW
Sbjct: 61  REGEAYLFGCTIAPLNTASSHVVCDPLRSRKLLLKRKELDKLQGLVDRKGYSIVPISMYW 120

Query: 119 KNA-WCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKN 157
           +   W K++IG+ KGKK+HDKR D K+REWQ++KAR +K 
Sbjct: 121 QKGAWVKIEIGLGKGKKEHDKRDDTKDREWQIEKARTIKK 160


>UniRef50_C4Z0S0 SsrA-binding protein n=22 Tax=Bacteria RepID=C4Z0S0_EUBE2
          Length = 164

 Score =  199 bits (507), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 1/155 (0%)

Query: 5   KAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAF 64
           K    G+  IA NK+A  +YFIEE++EAG+ L G EVKS+RAGK +I +SY+ + +GE +
Sbjct: 8   KTSASGNRLIANNKKAYFDYFIEEKYEAGMVLHGTEVKSIRAGKCSIKESYIKIENGEVY 67

Query: 65  LFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCK 124
           + G NITP    +     DP R +KLLL++ +++ L G +  +GYT+V L +Y K    K
Sbjct: 68  VLGMNITPYEKGNI-FNKDPLRPKKLLLHKNQINKLTGELTIKGYTLVPLQVYLKEGKVK 126

Query: 125 VKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
           ++IG+ KGKK  DKR  I +++   D  +  KN +
Sbjct: 127 MEIGLGKGKKNFDKRDSIAKKDQIRDAQKEFKNKN 161


>UniRef50_A3ZLQ9 SsrA-binding protein n=2 Tax=Planctomycetaceae RepID=A3ZLQ9_9PLAN
          Length = 176

 Score =  199 bits (506), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 52/148 (35%), Positives = 85/148 (57%)

Query: 11  SATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI 70
              I  N++ARH+Y I +  E G+ L G EVK+LR GK ++ +++  +  GE FL    I
Sbjct: 28  ERPIGENRKARHDYEIIDTLECGIQLVGSEVKTLRDGKVSLGEAFARVLRGEVFLVNCEI 87

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVA 130
                 S  +   P R RKLLL + E+     +   +G ++V L +Y+K    KV +G+ 
Sbjct: 88  PEYRNTSMFLNHVPKRPRKLLLRKSEIVKFAAKSEDKGLSIVPLKMYFKRGLVKVLLGIG 147

Query: 131 KGKKQHDKRSDIKEREWQVDKARIMKNA 158
           +G+KQHDKR  +K+++ + D AR+M++ 
Sbjct: 148 RGRKQHDKRDKLKQQDAKRDIARVMRSR 175


>UniRef50_B2UY12 SsrA-binding protein n=24 Tax=Bacteria RepID=SSRP_CLOBA
          Length = 156

 Score =  197 bits (503), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 68/154 (44%), Positives = 99/154 (64%), Gaps = 1/154 (0%)

Query: 7   HKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLF 66
            K  S T+A N++ARHEYFIEE  EAG+AL G EVKS+R G+AN+ +SY  +R+GE F+ 
Sbjct: 3   RKKSSNTLAENRKARHEYFIEETIEAGIALVGTEVKSIRNGRANLKESYADIRNGEIFIL 62

Query: 67  GANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVK 126
             +I+P    +     +P R +KLLL++ E+  L G V+R+GYT++ L+LY K    KV 
Sbjct: 63  SMHISPYEQGNI-FNVEPLREKKLLLHKSEIHRLAGLVSRDGYTLIPLTLYLKAGKVKVA 121

Query: 127 IGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           +G+ KGKK +DKR  + E+    +  R +K   R
Sbjct: 122 LGICKGKKDYDKRDSMLEKAHNREMQRALKERSR 155


>UniRef50_C1F4B8 SsrA-binding protein n=1 Tax=Acidobacterium capsulatum ATCC 51196
           RepID=C1F4B8_ACIC5
          Length = 176

 Score =  197 bits (503), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 67/162 (41%), Positives = 101/162 (62%), Gaps = 4/162 (2%)

Query: 2   TKKKAHKP---GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLL 58
            K K   P   G    A N+ A H YF+ E++EAG+AL+G EVKS+R GKAN+ D+Y L+
Sbjct: 15  AKPKPRDPVAAGERDAAQNRAASHNYFLLEKYEAGVALRGTEVKSIREGKANLKDAYGLI 74

Query: 59  RDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW 118
           +DGEAFL  A+I P +  + +   +  RTRKLLLNQ EL  L+G+  ++G+T++   LY+
Sbjct: 75  KDGEAFLLNAHIGPYSHGN-YTNHEALRTRKLLLNQTELKKLWGKTQQKGFTLIPTRLYF 133

Query: 119 KNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           +N   K ++ VAKGK+  DKR   ++RE   +    +  + +
Sbjct: 134 RNGRVKCELAVAKGKQDWDKRETERKREADREARAAIDRSKK 175


>UniRef50_D2RBT7 SsrA-binding protein n=3 Tax=Bacteria RepID=D2RBT7_GARVA
          Length = 165

 Score =  197 bits (502), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 69/160 (43%), Positives = 103/160 (64%), Gaps = 3/160 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLL-R 59
           M  K A + G+ T+A N++A H+Y IE+ +EAGLAL G EVKSLR G+A++++S+V + R
Sbjct: 1   MANKPA-QDGTVTVAQNRKAHHDYVIEDCYEAGLALTGTEVKSLREGRASLAESFVNIDR 59

Query: 60  DGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK 119
            GE +L GANI       T     P R RKLLL+  E+  L  +   +GYTVV L LY+K
Sbjct: 60  RGEMWLEGANIPEYLNG-TWNNHAPKRKRKLLLHAAEIAKLSRQTEAKGYTVVPLRLYFK 118

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
            ++ KV+I +A+GKK+ DKR  ++E + + +  R M+  +
Sbjct: 119 GSYVKVEIALARGKKEFDKRQALREEQDKREALREMRYRN 158


>UniRef50_Q7UZP2 SsrA-binding protein n=33 Tax=cellular organisms RepID=SSRP_PROMP
          Length = 175

 Score =  195 bits (497), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 57/152 (37%), Positives = 85/152 (55%)

Query: 6   AHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFL 65
             +     ++ N+ A+ +Y I E  EAG+ L G EVKS+R G  N+ D Y   RDGE  L
Sbjct: 24  KKEAVFKRLSENRYAKFQYEILETIEAGIELLGTEVKSIRNGSVNLRDGYCSFRDGEILL 83

Query: 66  FGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKV 125
              +I+P          DP R RKLLL+++E+  L     ++G T++ LS+Y K +W K+
Sbjct: 84  LNVHISPHKNVGPFFNHDPLRNRKLLLHKKEIVKLKYNTEKKGLTIIPLSIYLKGSWIKL 143

Query: 126 KIGVAKGKKQHDKRSDIKEREWQVDKARIMKN 157
            IG+ KGKK HDKR   K+R+ + +    +K 
Sbjct: 144 TIGIGKGKKLHDKRQADKQRDIKREIKTALKR 175


>UniRef50_C0QVL0 SsrA-binding protein n=2 Tax=Brachyspira RepID=C0QVL0_BRAHW
          Length = 161

 Score =  195 bits (497), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 65/162 (40%), Positives = 92/162 (56%), Gaps = 6/162 (3%)

Query: 1   MTKKKAHKPGSATI-----ALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSY 55
           M  KK  K GS TI       NK+A   Y + E+FEAG+ L G EVKSLR    N+SDSY
Sbjct: 1   MASKKDKKSGSNTISSGEIVKNKKALFNYELVEKFEAGIVLLGTEVKSLRERSVNMSDSY 60

Query: 56  VLLRDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALS 115
              + GE F+   +I+P    +     +P R RKLL+ +REL  LYG++  +G T++ + 
Sbjct: 61  ASFKKGELFIVNMHISPYHFGN-RNNHEPLRERKLLMKKRELRRLYGKIKEQGLTLIPVK 119

Query: 116 LYWKNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKN 157
           LY+     KV++ +AKGKK HDKR  +K +    +  R +K 
Sbjct: 120 LYFSRGKVKVELALAKGKKLHDKRETLKRKTLDREMERYIKR 161


>UniRef50_A7HGZ0 SsrA-binding protein n=8 Tax=Bacteria RepID=SSRP_ANADF
          Length = 165

 Score =  195 bits (496), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 66/149 (44%), Positives = 92/149 (61%), Gaps = 1/149 (0%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             +A N+RAR ++ IE+ +EAGL L G EVKSLR G  N+SD+Y L R  E FL    I 
Sbjct: 18  KIVATNRRARFDFTIEDSWEAGLVLTGSEVKSLREGNVNLSDAYALPRGDELFLVNCRIG 77

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
               A+ H   +P R RKLL+N+ ELD + G++ + GYT+V L LY+K  W KV++G+AK
Sbjct: 78  EYKQAA-HFGHEPLRDRKLLMNRPELDRVKGKIEQRGYTLVPLRLYFKQGWAKVELGLAK 136

Query: 132 GKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           G+   D+R  I ERE + +  R +    R
Sbjct: 137 GRSHEDRRHAIAERETKREMDREISRRRR 165


>UniRef50_B2S2D1 SsrA-binding protein n=2 Tax=Treponema pallidum RepID=SSRP_TREPS
          Length = 154

 Score =  195 bits (496), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 56/153 (36%), Positives = 86/153 (56%), Gaps = 1/153 (0%)

Query: 7   HKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLF 66
              G+  IA N++A   Y +E+  E G+AL+G EVKS+RAG  +  D++  +R GE +L 
Sbjct: 2   RGTGTHLIAKNRKAFFNYHVEDRLECGIALEGTEVKSVRAGHLSFPDAFAEMRGGELWLK 61

Query: 67  GANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVK 126
             +I     A +    +P R RKLL ++ ++  L  +V  +GYT+V L  Y K    KV 
Sbjct: 62  NVHIAEYVHACS-FAPNPDRMRKLLAHRDQIARLKRKVEEKGYTLVPLEFYLKAGRVKVA 120

Query: 127 IGVAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
           +G+ KGKK  DKR+ IK R+   + +R +   H
Sbjct: 121 LGICKGKKLFDKRAQIKARDNARELSRSLCERH 153


>UniRef50_D2R3D1 SsrA-binding protein n=1 Tax=Pirellula staleyi DSM 6068
           RepID=D2R3D1_9PLAN
          Length = 179

 Score =  194 bits (494), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 54/151 (35%), Positives = 88/151 (58%), Gaps = 2/151 (1%)

Query: 9   PGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGA 68
           P    +A N++AR  Y I +  E G+ L G EVKSLR GK ++ ++Y  ++DG+ +L GA
Sbjct: 29  PPVTLVAENRKARFNYEILDSLECGIQLVGSEVKSLRDGKLSLDEAYARIKDGDVWLVGA 88

Query: 69  NITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-KNAWCKVKI 127
           +I     AS      P R RKLL++++++    G  + +G T+V L +Y+ +    KV I
Sbjct: 89  DIAEYKQASIW-NHAPKRPRKLLMHKQQMRKFAGTSHDKGLTLVPLKVYFTERGIAKVVI 147

Query: 128 GVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
           G+ +GKK HDKR  +K+ + + D +R  +  
Sbjct: 148 GLCRGKKLHDKRETLKKNDAKRDISRAFRKK 178


>UniRef50_Q2GCW3 SsrA-binding protein n=2 Tax=Neorickettsia RepID=SSRP_NEOSM
          Length = 147

 Score =  193 bits (492), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 63/144 (43%), Positives = 95/144 (65%), Gaps = 2/144 (1%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             IA+NK+AR +Y + +EFEAG+ L G EVK+L+   A++++++V  R  E +L   ++ 
Sbjct: 2   KVIAINKKARFDYSLIDEFEAGIVLLGTEVKALKYHSASLNEAFVAFRRFELWLNNMHVP 61

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NAWCKVKIGVA 130
           P   AS      PTR+RKLL+++R+L+ + G V  +G T+V LS+Y   N   KVK  +A
Sbjct: 62  PYKPAS-RFNHVPTRSRKLLVHKRQLNKISGAVRTKGLTLVPLSIYVNENGLIKVKFALA 120

Query: 131 KGKKQHDKRSDIKEREWQVDKARI 154
           KGKK+HDKR DIK+R+W   +AR 
Sbjct: 121 KGKKKHDKRQDIKDRDWARKQARQ 144


>UniRef50_D1U5X0 SsrA-binding protein n=2 Tax=Desulfovibrio RepID=D1U5X0_9DELT
          Length = 158

 Score =  193 bits (491), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 65/159 (40%), Positives = 91/159 (57%), Gaps = 1/159 (0%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M KKK+      TI  NK+AR  Y I E FEAG++L G EVKSLR G     D YV  RD
Sbjct: 1   MAKKKSTTTPD-TIGTNKQARRLYDILETFEAGISLLGSEVKSLRGGHVAFKDGYVQFRD 59

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
             AFL G +I P      +   DP R R+LLL++RE+  L  + +++G TV+ + +Y+  
Sbjct: 60  HSAFLVGVHIAPYEKTGEYDQHDPERPRQLLLHKREILVLKAKSDQKGLTVIPMKMYFSR 119

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
              KV IG+ KGK  H ++ D+K+R+   D AR + +  
Sbjct: 120 GKIKVLIGLGKGKNVHSRKQDLKDRDIARDTARQLADHR 158


>UniRef50_Q3ZZ31 SsrA-binding protein n=6 Tax=Bacteria RepID=SSRP_DEHSC
          Length = 172

 Score =  192 bits (489), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 95/147 (64%), Gaps = 1/147 (0%)

Query: 13  TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
           T+  N++A H YF+EE++EAG+ L G E+KSLR+G+ N+ D+YV  + GE +L  A+I+ 
Sbjct: 24  TLTTNRKAFHNYFLEEKYEAGIMLLGTEIKSLRSGRVNMGDAYVKPQRGELWLVNAHISA 83

Query: 73  MAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKG 132
               S H   +P R RKLL++++E+  L  +V  +G T++ + +Y KN   KV++ + +G
Sbjct: 84  YE-CSGHTSHEPMRERKLLMHRKEIALLMSKVKEKGLTLIPVRIYLKNDIAKVELSLGRG 142

Query: 133 KKQHDKRSDIKEREWQVDKARIMKNAH 159
           KK +DKR  + +R+ + +  R +K  +
Sbjct: 143 KKLYDKRDTVTKRDTERELEREVKYRN 169


>UniRef50_A5EXZ5 SsrA-binding protein n=4 Tax=Proteobacteria RepID=SSRP_DICNV
          Length = 159

 Score =  192 bits (488), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 76/160 (47%), Positives = 113/160 (70%), Gaps = 3/160 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M+KK         I  NK+  H+YF+EE FEAG+AL+GWEVK++RAG+  I +SY+L++D
Sbjct: 1   MSKKNT---ADNHIVTNKKVFHDYFLEEHFEAGIALEGWEVKAVRAGRIQIKESYILVKD 57

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
            + +LFGA I P+A AS+H+  +  RTRKLLL++ ++  L G   R+GYT++ +SLYWKN
Sbjct: 58  QQVYLFGALIHPLASASSHIFPEAQRTRKLLLHRYQIAKLIGASERDGYTLMPVSLYWKN 117

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
            + KV + +AKGKK+ DKR   K+++W+  ++RIMK   R
Sbjct: 118 GFVKVDVAIAKGKKEFDKRQVKKDQDWKKTQSRIMKAHKR 157


>UniRef50_A9NF97 SsrA-binding protein n=1 Tax=Acholeplasma laidlawii PG-8A
           RepID=SSRP_ACHLI
          Length = 149

 Score =  191 bits (487), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 66/149 (44%), Positives = 95/149 (63%), Gaps = 1/149 (0%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             I  NK+A  EYFIE++F AG+ LQG EVKS+RAGK +I+++Y+  R+GE F+   +I 
Sbjct: 2   KIITQNKKAHFEYFIEQKFVAGIKLQGSEVKSIRAGKCSINEAYITFRNGEVFILNMHIA 61

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
               AS+    + TRTRKLLLN+ E+D L G   R+G T++ L++       KV I +AK
Sbjct: 62  KFD-ASSIFNHEETRTRKLLLNRSEIDKLMGAQTRDGMTIIPLTVELHEGLIKVVIALAK 120

Query: 132 GKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           GKK  DKR  IKER+ + ++ + +K   R
Sbjct: 121 GKKLFDKRETIKERDIKREQQQSLKGKMR 149


>UniRef50_D2PSC9 SsrA-binding protein n=1 Tax=Kribbella flavida DSM 17836
           RepID=D2PSC9_9ACTO
          Length = 173

 Score =  191 bits (486), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 55/155 (35%), Positives = 88/155 (56%), Gaps = 1/155 (0%)

Query: 6   AHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFL 65
                   IA N++A H+Y + E +EAG+ LQG EVK+LRAG+A++   +  + + E +L
Sbjct: 16  KKPEADPVIARNRKAAHDYHLGESWEAGMVLQGAEVKALRAGRASLVGGFATVEEREIWL 75

Query: 66  FGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKV 125
            G +I   + A         R RKLLL++ ++D +  +VN  G T+V + LY+K+   KV
Sbjct: 76  HGVHIPQYSQAR-WFNDGSRRKRKLLLHRAQIDKIERKVNESGLTIVPVLLYFKDGRAKV 134

Query: 126 KIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           +I +A+GKK  DKR  + ERE   +  R +    +
Sbjct: 135 EIALARGKKTWDKRHALAEREATREAERAVSRRLK 169


>UniRef50_A6G542 SsrA-binding protein n=2 Tax=Proteobacteria RepID=A6G542_9DELT
          Length = 159

 Score =  191 bits (486), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 62/150 (41%), Positives = 91/150 (60%), Gaps = 1/150 (0%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
           G   +  N++A H+Y I EE E+G+ALQG EVKS+R G+ ++ ++Y   R  E FL  A+
Sbjct: 11  GDEVLEENRKATHDYEILEELESGVALQGSEVKSIRDGRISLKEAYCQFRGDELFLLQAH 70

Query: 70  ITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGV 129
           I     A       P R RKLLL++RELD L+  V  +G T+V L +Y K+   K+ IG+
Sbjct: 71  IAEFPQAHAR-NHPPLRARKLLLHRRELDKLHDAVKTQGLTIVPLVVYLKSRRIKILIGL 129

Query: 130 AKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
            +GKK HDKR+ IKER+ + +  R ++   
Sbjct: 130 GRGKKVHDKRAAIKERDQKREMQRALREHR 159


>UniRef50_A9G109 SsrA-binding protein n=1 Tax=Sorangium cellulosum 'So ce 56'
           RepID=SSRP_SORC5
          Length = 162

 Score =  190 bits (483), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 71/160 (44%), Positives = 101/160 (63%), Gaps = 3/160 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M K+KA +PG   IA NKRA   Y + + FEAG+ L+G EVK LRAGKA+++DS+  +  
Sbjct: 1   MPKEKA-RPGETLIARNKRAGFNYDLGDRFEAGIVLKGSEVKMLRAGKADLTDSFCTVLR 59

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GE FL G +I  M  AS      P   RKLLL++RE++ +   + REG T VA  LY+K+
Sbjct: 60  GEVFLHGVSIAAM--ASAAFGHVPKGARKLLLHRREIERIDLSIAREGMTAVATRLYFKS 117

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
              KV+I +A+GKK HDKR  IKE++ + +   ++ +  R
Sbjct: 118 GLAKVEIALARGKKSHDKRETIKEQDAEREMRAVVVHGQR 157


>UniRef50_Q1IQ53 SsrA-binding protein n=1 Tax=Candidatus Koribacter versatilis
           Ellin345 RepID=SSRP_ACIBL
          Length = 175

 Score =  190 bits (483), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 57/159 (35%), Positives = 95/159 (59%), Gaps = 1/159 (0%)

Query: 2   TKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDG 61
            K+     G    ++N+ A H YF+ +++EAG+AL+G EVKS+R G+AN+ D+Y L+++ 
Sbjct: 17  AKRDPVASGERDASVNRAASHNYFLLDKYEAGVALRGTEVKSIRDGRANLKDAYGLVKEN 76

Query: 62  EAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNA 121
           E +L  A+I P   AS +    P RTRKLL+ +RE+  L     ++G+T++   +Y+KN 
Sbjct: 77  ELWLINAHIGPYDAAS-YNNHAPLRTRKLLVKKREILKLLAASQQKGHTLIPTRMYFKNG 135

Query: 122 WCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
             KV++ VAKGK+  DKR   + +    D    +  + +
Sbjct: 136 RVKVELAVAKGKQLWDKRETDRRKTADRDAREAIARSRK 174


>UniRef50_Q7UH38 SsrA-binding protein n=1 Tax=Rhodopirellula baltica
           RepID=SSRP_RHOBA
          Length = 176

 Score =  189 bits (482), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 54/153 (35%), Positives = 86/153 (56%), Gaps = 2/153 (1%)

Query: 7   HKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLF 66
           ++P    +A N++A+  Y I +  E G+ L G EVKS+R GK ++ ++++ + +GE +L 
Sbjct: 25  NQPNITPVAENRKAKFRYEILDSVECGMMLMGSEVKSMREGKLSLDEAHIRVTNGELWLV 84

Query: 67  GANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-KNAWCKV 125
           G++I     A      DP R RKLL++ +E D   GR    G T++ L +Y+ +    K 
Sbjct: 85  GSDIAHYNNAGMW-NHDPRRPRKLLVHAKEFDKFAGRAFERGLTLIPLRVYFSERGLAKC 143

Query: 126 KIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
            +G+ KGKK HDKR  IK+RE      R M+  
Sbjct: 144 VMGLVKGKKLHDKRETIKKRESDRGLQRAMRRK 176


>UniRef50_C1ZDG5 SsrA-binding protein n=1 Tax=Planctomyces limnophilus DSM 3776
           RepID=C1ZDG5_PLALI
          Length = 160

 Score =  189 bits (482), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 58/156 (37%), Positives = 98/156 (62%), Gaps = 1/156 (0%)

Query: 2   TKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDG 61
           +K +  KP + ++  N+RARHEY + ++ + G+ L G EVKS+RAGK +I +++V ++DG
Sbjct: 5   SKPEDDKPNNISVCRNRRARHEYELMDQLDCGIVLMGSEVKSIRAGKVSIEEAWVRVQDG 64

Query: 62  EAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNA 121
           E +L G +I     AS  +  +  RTRKLL ++REL    GR +    T+V L +Y +  
Sbjct: 65  ELYLVGCDINEYPQAS-WLNHETKRTRKLLAHRRELKKFCGRTSERSITIVPLEMYLQRG 123

Query: 122 WCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKN 157
           + K+KI +AKG+K HDKR  +K ++ + +  ++ + 
Sbjct: 124 FVKIKIALAKGRKLHDKREKLKAQDARREIRQVTRR 159


>UniRef50_D1NAK5 SsrA-binding protein n=1 Tax=Victivallis vadensis ATCC BAA-548
           RepID=D1NAK5_9BACT
          Length = 153

 Score =  189 bits (481), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 49/154 (31%), Positives = 78/154 (50%), Gaps = 1/154 (0%)

Query: 4   KKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEA 63
                P    +A NK+A H Y I E FEAG+ L G EVKS R     +++ YV + +G+A
Sbjct: 1   MPRQTPADPVLATNKKAFHNYHIIERFEAGVELVGTEVKSCRDRAIVMNEGYVTINNGQA 60

Query: 64  FLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWC 123
           +L   +I      +       T+ R+LLL+  E+  L   + ++G T+V L  Y K    
Sbjct: 61  WLLNVHIAVYGFGN-RFNHVATQKRRLLLHHNEILKLAQWLGQKGGTIVPLKFYLKKGLV 119

Query: 124 KVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKN 157
           KV+I   +GK   D+R  ++ R+  ++  R +K 
Sbjct: 120 KVEIAYCQGKTHGDQRETLRRRQSDLEMRRAVKR 153


>UniRef50_Q04E23 SsrA-binding protein n=4 Tax=Lactobacillales RepID=SSRP_OENOB
          Length = 155

 Score =  189 bits (481), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 66/159 (41%), Positives = 97/159 (61%), Gaps = 4/159 (2%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M KK  H      +A N+RA   YFI E +EAG+ L G E+KS+R G+  I D+Y+ +RD
Sbjct: 1   MAKKDKHDDA---LARNRRASFNYFIGETYEAGIQLTGTEIKSVRLGQITIGDAYITVRD 57

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
            +AFL  ANI+P    +     DP R RKLLL+++E+ +L   V++EG T+V L +Y   
Sbjct: 58  QQAFLNNANISPYKQGN-QFNVDPLRRRKLLLHKKEILALDRAVSKEGKTIVPLRVYIVK 116

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
            + K+ I +  GKK +DKR  IKER+ + +  + +KN H
Sbjct: 117 GFAKILIAIGTGKKNYDKRQTIKERDLKRELGKNLKNFH 155


>UniRef50_B2ULK9 SsrA-binding protein n=3 Tax=Verrucomicrobia RepID=B2ULK9_AKKM8
          Length = 152

 Score =  188 bits (479), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 59/150 (39%), Positives = 93/150 (62%)

Query: 11  SATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI 70
           S+ I+ NK+AR +Y I + +E G+ L+G EVKS+RAGK NI+DS+  + +G+  L+G +I
Sbjct: 2   SSDISTNKKARRDYEILDTYECGMELKGTEVKSIRAGKVNIADSFARVENGQMLLYGCDI 61

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVA 130
            P   A         R R+LLL++RE+  L  + +++G ++VAL LYWKN   K+ +G+ 
Sbjct: 62  QPWETAGEFFQHQARRPRRLLLHKREIFKLEQQTSQKGCSLVALKLYWKNGKVKLALGLG 121

Query: 131 KGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           KGK   D+R D+K R    +  R +   +R
Sbjct: 122 KGKTHRDQRYDLKARVEMREAQREVARINR 151


>UniRef50_Q1GDQ2 SsrA-binding protein n=12 Tax=Rhodobacterales RepID=SSRP_SILST
          Length = 158

 Score =  188 bits (479), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 67/158 (42%), Positives = 98/158 (62%), Gaps = 3/158 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M K+K   P    IA N+RAR +Y IE++ E G+ L+G EVKSLRAG +NI++SY  + +
Sbjct: 1   MAKQKTD-PNYKVIAENRRARFDYAIEQDLECGIMLEGSEVKSLRAGGSNIAESYAAVEE 59

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK- 119
           GE +L  + I P   A      +  R RKLL++++E+  L+    R+G T+V L LY+  
Sbjct: 60  GELWLVNSYIAPYEQAKV-FKHEERRRRKLLVSRKEMADLWNATQRKGMTLVPLVLYFNH 118

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKN 157
               K+KIG+AKGKK HDKR    +R+W   K R++K+
Sbjct: 119 RGMAKIKIGIAKGKKNHDKREAQAKRDWSRQKQRLLKD 156


>UniRef50_Q254F5 SsrA-binding protein n=1 Tax=Chlamydophila felis Fe/C-56
           RepID=SSRP_CHLFF
          Length = 150

 Score =  188 bits (478), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 52/150 (34%), Positives = 84/150 (56%), Gaps = 1/150 (0%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
            S  I  N++A   Y + +  +AG+ L G E+KSLR    N+ D+YV +  GEA+L  A+
Sbjct: 2   SSKEIVSNRKALRNYEVLDTVDAGVVLTGTEIKSLRDHGGNLGDAYVTISKGEAWLLNAS 61

Query: 70  ITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGV 129
           I P    + +   +  R RKLLL++ E+  L  +V+++G T++ L ++    + K+++G 
Sbjct: 62  IAPYRFGNIY-NHEERRKRKLLLHRYEIQKLESKVSQKGITIIPLGMFLSRGYVKIRLGC 120

Query: 130 AKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
            +GKK HDKR  I  RE Q +    MK   
Sbjct: 121 CRGKKAHDKRQTIIAREKQREVESAMKRYR 150


>UniRef50_Q1MRU5 SsrA-binding protein n=5 Tax=Desulfovibrionales RepID=SSRP_LAWIP
          Length = 155

 Score =  187 bits (476), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 63/154 (40%), Positives = 97/154 (62%), Gaps = 1/154 (0%)

Query: 6   AHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFL 65
           + K  S  +  N++ARH Y + +  EAG+ L G EVKSLR+G A+  DSYV  + GE ++
Sbjct: 2   SAKKNSHLVFENRKARHLYDLLDFLEAGIVLTGPEVKSLRSGHASFQDSYVDFKQGEGYI 61

Query: 66  FGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKV 125
            G +I P   A  +V+ +P R RKLLL+++EL  L  +V ++G T+V L LY+KN   K 
Sbjct: 62  VGLHIPPYNNAG-YVIQNPDRPRKLLLHRQELKMLASKVEQKGLTIVPLKLYFKNRKVKT 120

Query: 126 KIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
           +I +AKG+K +D R+++K+R   +D  R +   H
Sbjct: 121 EIALAKGRKLYDHRNELKKRAEAMDIKRELAARH 154


>UniRef50_Q9Z8K1 SsrA-binding protein n=2 Tax=Chlamydophila pneumoniae
           RepID=SSRP_CHLPN
          Length = 151

 Score =  187 bits (475), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 55/150 (36%), Positives = 86/150 (57%), Gaps = 1/150 (0%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
               I  N++A   Y + E  EAG+ L G E+KSLR    N+ D+YV++  GE +L  A+
Sbjct: 2   AQKEIVSNRKALRNYEVIETLEAGIVLTGTEIKSLRDHGGNLGDAYVIVSKGEGWLLNAS 61

Query: 70  ITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGV 129
           I P    + +   +  R RKLLL++ EL  L G++ ++G T++ L ++    + KV++G 
Sbjct: 62  IAPYRFGNIY-NHEERRKRKLLLHRYELRKLEGKIAQKGMTLIPLGMFLSRGYVKVRLGC 120

Query: 130 AKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
            +GKK +DKR  I ERE + + A  MK  H
Sbjct: 121 CRGKKAYDKRRTIIEREKEREVAAAMKRRH 150


>UniRef50_Q02A69 SsrA-binding protein n=1 Tax=Candidatus Solibacter usitatus
           Ellin6076 RepID=SSRP_SOLUE
          Length = 156

 Score =  186 bits (474), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 54/158 (34%), Positives = 82/158 (51%), Gaps = 3/158 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M  KK        ++ N++A H YF+ E FE G+ L G EVK+ +  K  + D+Y  +  
Sbjct: 1   MADKKDF--AFKILSDNRQAGHNYFLSERFECGMVLTGTEVKAAKDAKIQLKDAYASVLG 58

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
            EA+L  A+I+  +  +      P R RKLLL++RE+D L      +G  ++   +Y KN
Sbjct: 59  DEAWLLNAHISQYSHGN-RENHLPVRNRKLLLHRREIDKLQEITREKGLALIPTKIYMKN 117

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
              K +I VAKGKK +DKR+  K R    +    M+  
Sbjct: 118 GKIKCEIAVAKGKKLYDKRAADKARTADDEARAEMRRR 155


>UniRef50_B2KCF8 SsrA-binding protein n=1 Tax=Elusimicrobium minutum Pei191
           RepID=SSRP_ELUMP
          Length = 157

 Score =  186 bits (474), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 57/160 (35%), Positives = 95/160 (59%), Gaps = 4/160 (2%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M KK     G    A N++A H Y I + +EAG+ L G EVKS+R  + ++  ++V +  
Sbjct: 1   MAKKDN---GPLVAATNRKAYHNYHILDTYEAGIELLGSEVKSIRKKEVSLDGAFVRIEG 57

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
            +A++F  +I P    +T    +P R R+LLLN++E++ L G    +G+T++ L +Y+KN
Sbjct: 58  MQAYVFNMHINPYKY-NTVTEVEPLRQRRLLLNKKEINKLKGHAEIKGHTIIPLEVYFKN 116

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
            W K+K+G+ KGK+  DKR  IK+R+   +  +  KN  +
Sbjct: 117 GWAKIKVGLGKGKQLFDKRDAIKKRDLSREMEKDFKNKIK 156


>UniRef50_A5FZS6 SsrA-binding protein n=11 Tax=Alphaproteobacteria RepID=SSRP_ACICJ
          Length = 159

 Score =  186 bits (473), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 66/160 (41%), Positives = 97/160 (60%), Gaps = 3/160 (1%)

Query: 1   MTKKKAHKPGSATIA-LNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLR 59
           M + +     S  IA  N++AR  Y I++  EAG+ L+G EVKSLR G+A +S+++   R
Sbjct: 1   MAEPRKSGLISHGIAAQNRKARFNYTIKDTVEAGIVLRGAEVKSLRMGRATLSEAFAGER 60

Query: 60  DGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK 119
           DGE +LF   I            D    RKLLL ++++D L G + R+G TVV L +++ 
Sbjct: 61  DGEMYLFNMYIPEY-QGGVLSRFDTKGPRKLLLKRKQIDQLLGAIARQGSTVVPLDVHFN 119

Query: 120 -NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
                KV +G+A+G+KQHDKR  I +R+W+ DKARI+KN 
Sbjct: 120 PRGLAKVTLGIAEGRKQHDKRQAIAKRDWERDKARILKNR 159


>UniRef50_C2D8P0 TmRNA-binding protein n=2 Tax=Coriobacteriaceae RepID=C2D8P0_9ACTN
          Length = 172

 Score =  185 bits (472), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 52/159 (32%), Positives = 89/159 (55%), Gaps = 2/159 (1%)

Query: 3   KKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGE 62
           K    +     IA N+ A H+Y ++   EAG+ L G EVKSLR     ++D + ++R+ E
Sbjct: 11  KGARKQATFHLIAKNRSAYHDYDLDNAEEAGIELTGVEVKSLRERSCQLTDCFCIVRNNE 70

Query: 63  AFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NA 121
            +L G +I P +        DP R R+LL++++++ S+  RV  +G ++V L +Y+    
Sbjct: 71  LYLVGLHIHPYSHGGVW-NIDPDRRRRLLMHKKQILSIARRVQTKGVSLVPLEIYFNERN 129

Query: 122 WCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
             KVK+ V +GKK +DKR+   +R+   +  R++K   R
Sbjct: 130 RVKVKVAVGRGKKMYDKRAAAAKRDSDREIQRVLKARTR 168


>UniRef50_A9BF44 SsrA-binding protein n=3 Tax=Bacteria RepID=SSRP_PETMO
          Length = 150

 Score =  184 bits (468), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 64/149 (42%), Positives = 93/149 (62%), Gaps = 2/149 (1%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
            T+A NK+A H+Y I E FEAG++L G EVKS +AGK N  DS+  +  GE  L+  +I+
Sbjct: 2   TTLARNKKATHDYEIIETFEAGISLLGTEVKSSKAGKINFKDSFCKIEKGELILYNVHIS 61

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN-AWCKVKIGVA 130
           P + AS     DP R RKLLL+++E+  L  +V +EG T++ L +Y  N    KVKI +A
Sbjct: 62  PYSGASI-FNHDPERPRKLLLHKKEIRRLQSKVQQEGLTMIPLEIYTNNKGLIKVKIALA 120

Query: 131 KGKKQHDKRSDIKEREWQVDKARIMKNAH 159
           KG K++DKR  I E+E++    +  K  +
Sbjct: 121 KGLKKYDKREKIAEKEYERRIRKQQKYEN 149


>UniRef50_A6L927 SsrA-binding protein n=17 Tax=Bacteria RepID=SSRP_PARD8
          Length = 153

 Score =  184 bits (467), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 2/153 (1%)

Query: 6   AHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFL 65
             K  +     NKRA  +Y + + F AG+ L G E+KS+R GKA++ D++ ++  GE ++
Sbjct: 2   KEKISNNIQIKNKRATFDYELLDTFTAGIVLTGTEIKSIRLGKASLVDTFCIVEKGELWV 61

Query: 66  FGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NAWCK 124
               I       T+   +  R RKLLL ++EL  + G V   G+T+V   L+       K
Sbjct: 62  KNMYIAEY-FYGTYNNHNARRDRKLLLTKKELRKIEGAVRASGFTIVPTRLFINEKGLAK 120

Query: 125 VKIGVAKGKKQHDKRSDIKEREWQVDKARIMKN 157
           V + +A+GKK++DKR  I+ER+ + +  R  K 
Sbjct: 121 VVVAIARGKKEYDKRDSIRERDDRREMDRAFKR 153


>UniRef50_C7JH78 Trans-translation helper factor SmpB n=8 Tax=Acetobacter
           pasteurianus RepID=C7JH78_ACEP3
          Length = 168

 Score =  183 bits (466), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 58/152 (38%), Positives = 90/152 (59%), Gaps = 2/152 (1%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
               +A N++AR  Y I E  EAGL L+G EVKSLR G+A I++++   RDG  +LF + 
Sbjct: 15  SHGMVAQNRKARFNYNILETIEAGLVLKGAEVKSLRLGRATINEAFAGERDGALWLFNSY 74

Query: 70  ITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NAWCKVKIG 128
           I            D    RKLL++++E+    G + ++G T+V L++++      KV +G
Sbjct: 75  IPEY-QGGVLSRFDTRAPRKLLMHRKEMRKFIGAIAKQGATLVPLNVHFNDRGLAKVTLG 133

Query: 129 VAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           +  GKK HDKR  I +R+WQ DKAR+++N  +
Sbjct: 134 LGVGKKSHDKRQSIADRDWQRDKARLIRNKGK 165


>UniRef50_Q6MQ46 SsrA-binding protein n=1 Tax=Bdellovibrio bacteriovorus
           RepID=SSRP_BDEBA
          Length = 152

 Score =  183 bits (465), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 58/151 (38%), Positives = 87/151 (57%), Gaps = 1/151 (0%)

Query: 9   PGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGA 68
                +  NK+AR +Y I E +EAGL L G EVKSLR     + DSY+  +  EA+L  A
Sbjct: 3   ENILIVHENKKARFDYTIVETYEAGLQLMGSEVKSLRNKDVQLKDSYISFKGDEAYLQNA 62

Query: 69  NITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIG 128
           +I     AS++    P R RKLL+++ ELD ++  +  +GY+ V L +Y+KN   K++I 
Sbjct: 63  HIAEYK-ASSYNNHVPERHRKLLMHRNELDEIFEALREKGYSCVPLKIYFKNGRAKLQIA 121

Query: 129 VAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
           + KGKK HDKR  IK+R+        ++ + 
Sbjct: 122 LVKGKKTHDKREAIKKRDVSDQIRSSLRRSR 152


>UniRef50_Q2S237 SsrA-binding protein n=1 Tax=Salinibacter ruber DSM 13855
           RepID=SSRP_SALRD
          Length = 154

 Score =  183 bits (465), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 62/136 (45%), Positives = 89/136 (65%), Gaps = 2/136 (1%)

Query: 9   PGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLL-RDGEAFLFG 67
            G+  +A NK+A+ EY IEE  EAGL L+G EVKS+R GKA++  +Y  + R+GE  + G
Sbjct: 3   EGTEVVARNKKAQFEYDIEETLEAGLVLEGSEVKSVRQGKASLDGAYCQVDREGEMKIHG 62

Query: 68  ANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKI 127
             I P   A      +P R RKLLL+ +++        +EGYT+V LSLY+++ W K+KI
Sbjct: 63  MYIKPYEEAGP-FGHEPRRNRKLLLHDQQIGKWGQMAEQEGYTIVPLSLYFRDGWAKLKI 121

Query: 128 GVAKGKKQHDKRSDIK 143
           G+AKG+++HDKR  IK
Sbjct: 122 GIAKGRQKHDKRQAIK 137


>UniRef50_C6HYH8 SsrA-binding protein n=1 Tax=Leptospirillum ferrodiazotrophum
           RepID=C6HYH8_9BACT
          Length = 170

 Score =  183 bits (465), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 56/165 (33%), Positives = 90/165 (54%), Gaps = 6/165 (3%)

Query: 1   MTKKKAHK----PGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYV 56
           M  KK  +      +  ++ N++A   Y + E FEAG+ L G EVK++R G  N+ D++V
Sbjct: 1   MAGKKKDEREADEKARAVSTNRKALFRYEVIERFEAGIVLWGTEVKAIREGSVNLGDAFV 60

Query: 57  LLRDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSL 116
                E++L+  ++ P          DP R RKLLL+++E+  L+G   ++G TVV L +
Sbjct: 61  RFEKEESWLYQMHVGPYR-GGNRENHDPLRVRKLLLHRKEILRLFGLTLQKGLTVVPLGI 119

Query: 117 YWKNA-WCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           Y  N    KV + + KGK Q DKR  IK RE   + +R+ ++  +
Sbjct: 120 YSNNRKKFKVTLALVKGKTQGDKREAIKRREADREISRVFRSNQK 164


>UniRef50_Q83N13 SsrA-binding protein n=2 Tax=Tropheryma whipplei RepID=SSRP_TROWT
          Length = 211

 Score =  182 bits (464), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 56/157 (35%), Positives = 86/157 (54%), Gaps = 1/157 (0%)

Query: 4   KKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEA 63
            +  K     IA NK A + YF+++ FEAGL L G EVKS+R  K ++S++Y+   + E 
Sbjct: 17  PERSKIPDCVIASNKSAEYNYFLDKTFEAGLVLLGSEVKSVRQQKISLSEAYIYEDNSEI 76

Query: 64  FLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWC 123
           +L    I            +P R RKLLL++ ++  L   +   G T+V +  Y++N   
Sbjct: 77  WLANLYIPEHKTGG-WTNHNPRRLRKLLLHKYQIARLRKDLLIPGITLVPIKFYFRNGRA 135

Query: 124 KVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           K+ I +A+GKK  DKR  IKERE  ++  R +K+  R
Sbjct: 136 KLLIALARGKKLIDKREVIKEREATLEANRALKHRLR 172


>UniRef50_B9XT05 SsrA-binding protein n=1 Tax=bacterium Ellin514 RepID=B9XT05_9BACT
          Length = 151

 Score =  182 bits (462), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 86/149 (57%), Gaps = 1/149 (0%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
           A I  N +AR +Y I E FEAG+AL+G EVKSLRAG   I+D++  + + + FL+  +I 
Sbjct: 2   ADILSNHKARRDYHILETFEAGIALKGTEVKSLRAGLGQIADAFARVENDQVFLYNVHID 61

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
                +     +P   RKLLL++ E+  L+G  + +G  +  LS YWKN   KV + V K
Sbjct: 62  EYRFGNRQ-NHEPKSARKLLLHKSEIRKLFGLASVKGNALFPLSFYWKNGKVKVALAVGK 120

Query: 132 GKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           GK + DKR DIK+R+   +  R   +  +
Sbjct: 121 GKVEFDKRDDIKKRDADRELKRATMHHFK 149


>UniRef50_A6DIW5 SsrA-binding protein n=2 Tax=Bacteria RepID=A6DIW5_9BACT
          Length = 147

 Score =  182 bits (462), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 55/145 (37%), Positives = 88/145 (60%), Gaps = 2/145 (1%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           IA N++AR  Y I E++EAG+ LQG EVKS R    +I++++V    GEA++  ++I+P 
Sbjct: 3   IATNRKARFNYEIIEKYEAGVELQGTEVKSCRNKSISIAEAFVAFESGEAWMRESHISPY 62

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGK 133
              +     +P R R+LLL++RE+  L   V ++G +V+ LS++ K    K+ IG+ +GK
Sbjct: 63  EQGN-RNNHEPKRKRRLLLHKREIRKLMREVEQKGLSVIPLSVHLKRGKIKISIGLCRGK 121

Query: 134 KQHDKRSDIKEREWQVDKARIMKNA 158
              DKR  IK+R+      R +KN 
Sbjct: 122 NTVDKRDSIKKRDNDRALQR-LKNK 145


>UniRef50_Q6MAG8 SsrA-binding protein n=4 Tax=Chlamydiales RepID=SSRP_PARUW
          Length = 153

 Score =  181 bits (460), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 56/142 (39%), Positives = 84/142 (59%), Gaps = 1/142 (0%)

Query: 8   KPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFG 67
           K   + +  N+RA H+Y I E FE G+ LQG E+KS+R   A + D+YV +   E +L G
Sbjct: 2   KDKHSDLVSNRRATHDYEILETFETGIVLQGTEIKSIRDHGATLQDAYVKVIHNELWLIG 61

Query: 68  ANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKI 127
            NI      + H   +  R RKLL+++RE+    G +  +G  ++ L+LY K    KV+I
Sbjct: 62  CNIAHYRFGNIH-NHEEKRDRKLLMHKREIKKCKGAIQEKGLALIPLALYLKQGRIKVRI 120

Query: 128 GVAKGKKQHDKRSDIKEREWQV 149
            +AKGKK  DKR+D+KER+ + 
Sbjct: 121 AIAKGKKSFDKRADLKERDDKR 142


>UniRef50_D1VZH7 SsrA-binding protein n=1 Tax=Prevotella timonensis CRIS 5C-B1
           RepID=D1VZH7_9BACT
          Length = 160

 Score =  180 bits (459), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 58/160 (36%), Positives = 92/160 (57%), Gaps = 3/160 (1%)

Query: 1   MTK-KKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLR 59
           M K ++A +  S     NKRA  EYF  + + AG+ L G E+KS+R GKA++ D++  + 
Sbjct: 2   MNKDEQALRKKSPIQIKNKRASFEYFFIDTYTAGIVLTGTEIKSIRLGKASLVDAFCYIN 61

Query: 60  DGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW- 118
           +GE ++ G NI+P     +    +  R RKLLL +RE+  L       G T++ + L+  
Sbjct: 62  NGEIWVKGMNISPY-FYGSFSNHEARRDRKLLLTKREIRRLEIDAKNPGNTILPVLLFID 120

Query: 119 KNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
           +    KV I +AKGKK++DKR  +KE+E Q +  R +K+ 
Sbjct: 121 QKGRAKVDIVLAKGKKEYDKRQSLKEKEDQREMDRALKHY 160


>UniRef50_A0FD64 TmRNA-binding protein n=1 Tax=Coxiella endosymbiont of Amblyomma
           americanum RepID=A0FD64_9COXI
          Length = 154

 Score =  180 bits (457), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 62/149 (41%), Positives = 92/149 (61%)

Query: 7   HKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLF 66
            +     I LNK+  H+Y+IE+  EAGL L+ WE+KS+RAG   + +SYV+ +  EA+L 
Sbjct: 2   KQSALRIIVLNKKTFHDYYIEQRLEAGLVLESWEIKSIRAGHIQLRNSYVIFKSREAWLI 61

Query: 67  GANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVK 126
           G + +P +  + HV  DP R+RKLLLN+ E+D L   V ++  TVV L L+W     K +
Sbjct: 62  GVHCSPPSNIAYHVKPDPKRSRKLLLNKHEIDRLLSTVQKKRLTVVPLDLHWYKNHVKTE 121

Query: 127 IGVAKGKKQHDKRSDIKEREWQVDKARIM 155
           + + +GK+ HDKR  IK REW+  K   +
Sbjct: 122 VALVRGKRMHDKRETIKRREWERKKHETL 150


>UniRef50_C9LGK2 SsrA-binding protein n=8 Tax=Prevotella RepID=C9LGK2_9BACT
          Length = 159

 Score =  180 bits (457), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 57/157 (36%), Positives = 89/157 (56%), Gaps = 3/157 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M K    KP    I  NKRA H+YF+ +   AG+ L G E+KS+R GKA + D++  + +
Sbjct: 1   MAKNNKLKPARINI-KNKRAEHDYFVIDRLTAGIVLTGTEIKSIRLGKAGLVDTFCFINN 59

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-K 119
           GE ++    +   +  S +   +  R RKLLLN++E+          G T+V L LY  +
Sbjct: 60  GEMWVKNMYVAEYSFGS-YNRHELRRDRKLLLNKKEIRHWASETKSPGLTIVPLRLYIDE 118

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMK 156
           N   K+ IG+ +GKK++DKR+ IKE+E + +  R+ K
Sbjct: 119 NGRAKLDIGLCRGKKEYDKRATIKEKESRREIERVTK 155


>UniRef50_B2GAM5 SsrA-binding protein n=4 Tax=Bacteria RepID=SSRP_LACF3
          Length = 157

 Score =  179 bits (456), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 64/158 (40%), Positives = 95/158 (60%), Gaps = 1/158 (0%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M KK      +  IA NK+ARH+Y + + FEAGL L G E+KS+RA +  + D Y    +
Sbjct: 1   MAKKNHQGLDANLIAQNKKARHDYTVTDTFEAGLVLTGTEIKSVRARRVTLKDGYAQFHN 60

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GE +L   +I   A  +     DP R RKLLL+++EL  L G +  +G T+V L +Y K+
Sbjct: 61  GELWLMNVHIAEFAGGNI-FNHDPLRNRKLLLHKKELKKLQGELTAKGVTLVPLKMYLKH 119

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
            + KV +G+A+GK ++DKR+ IK+RE      R+MK+ 
Sbjct: 120 GYAKVLLGLAQGKHEYDKRNAIKKREQDRQIDRVMKHY 157


>UniRef50_B3DV24 TmRNA-binding protein n=1 Tax=Methylacidiphilum infernorum V4
           RepID=B3DV24_METI4
          Length = 152

 Score =  179 bits (455), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 98/149 (65%)

Query: 11  SATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI 70
              + +N+RAR +Y I +  EAG+ L G EVKSL+AGK ++  ++  + +GEAFL+  NI
Sbjct: 2   ERDLVVNRRARKDYQILKTLEAGIVLLGSEVKSLKAGKGSLEGAFARVENGEAFLYQMNI 61

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVA 130
           +P   A+++ + DP   RKLLL+++E+  L G ++R+G T+V L LY++    KV +G+A
Sbjct: 62  SPYEKAASYALRDPKAPRKLLLHKKEIGELAGAISRQGRTIVPLKLYFRRGKIKVLLGIA 121

Query: 131 KGKKQHDKRSDIKEREWQVDKARIMKNAH 159
            G+ + DKR  IKE+E Q + +R++K   
Sbjct: 122 SGRSKVDKREKIKEQETQREISRVLKRRR 150


>UniRef50_C9RKN3 SsrA-binding protein n=1 Tax=Fibrobacter succinogenes subsp.
           succinogenes S85 RepID=C9RKN3_FIBSS
          Length = 156

 Score =  179 bits (454), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 54/152 (35%), Positives = 87/152 (57%), Gaps = 3/152 (1%)

Query: 7   HKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLR--DGEAF 64
            K  S  +  N++A H YF++E FE G+ L G EVKS+R GK  + ++++ +     E +
Sbjct: 3   KKESSTPVIQNRKANHLYFVDETFEVGIMLIGSEVKSIRNGKCTLGEAWIDIDENKDELW 62

Query: 65  LFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCK 124
           L GA+I     A+      P R RKLL +  E+  +      +G T++ L +Y+KN   K
Sbjct: 63  LVGAHIDEYLFAN-RFNHFPARRRKLLAHTHEIQKMRKAKELKGCTIIPLKMYFKNRIAK 121

Query: 125 VKIGVAKGKKQHDKRSDIKEREWQVDKARIMK 156
           +++G+ +GK QHDKR DI  R+ +++ AR  K
Sbjct: 122 LEVGICRGKDQHDKRQDILVRDAKMEMARAAK 153


>UniRef50_Q04TV5 SsrA-binding protein n=6 Tax=Leptospira RepID=SSRP_LEPBJ
          Length = 160

 Score =  177 bits (450), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 61/161 (37%), Positives = 97/161 (60%), Gaps = 4/161 (2%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M  KK     S  +  NK+A+  + +    EAG+ L G EVKSLR  K N++D++  +++
Sbjct: 1   MANKKEEPGHSPLV--NKKAKFNFELVSFIEAGIVLSGSEVKSLREKKGNLTDAFAKIKN 58

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GE FL   +ITP      +V     R RKLLL+++E++ L  +V  +G  +VA  +Y+KN
Sbjct: 59  GEVFLENFSITPYKNGG-YVNHPEIRPRKLLLHKKEIEKLERQVKEKGLVLVATKVYFKN 117

Query: 121 A-WCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
               KV+I V K KK HDKR D+++++ Q + AR +K+++R
Sbjct: 118 NLRVKVEIAVGKPKKIHDKRDDMQKKDAQQEIARALKSSNR 158


>UniRef50_B7KVC8 SsrA-binding protein n=25 Tax=cellular organisms RepID=SSRP_METC4
          Length = 157

 Score =  177 bits (450), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 68/159 (42%), Positives = 96/159 (60%), Gaps = 4/159 (2%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M  K    PG   +A N+ AR+ Y IE+  EAG+AL G EVKSLR GKA I +SY     
Sbjct: 1   MAPKPD--PGRRVVADNRSARYHYAIEDTLEAGIALTGTEVKSLRGGKATIGESYAGPSG 58

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK- 119
            +  LF A I     A+     D  R R+LLL++R+++ L G   R+GYTV+ L +Y+  
Sbjct: 59  NDLMLFNAYIPEYLEAN-RFNHDTKRPRRLLLHRRQINKLIGATQRQGYTVIPLKIYFND 117

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
               KV++G+ KGK+ HDKR  +K+R+W  DKAR+M++ 
Sbjct: 118 KGRAKVELGLGKGKQLHDKRESVKQRDWDRDKARLMRDK 156


>UniRef50_C0JZT0 SsrA-binding protein n=1 Tax=uncultured bacterium URE12
           RepID=C0JZT0_9BACT
          Length = 163

 Score =  177 bits (449), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 63/159 (39%), Positives = 90/159 (56%), Gaps = 1/159 (0%)

Query: 2   TKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDG 61
            K          IA N++ARH+Y IE+  EAGLAL+G EVKSLR     I+ ++  +   
Sbjct: 5   KKSDEKDKNFEQIATNRKARHDYLIEDTIEAGLALEGPEVKSLRLKHCVITSAFARVEPR 64

Query: 62  EAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNA 121
             +L+G  I+P A  +T    DP RTRKLLL + E+  L   V  +G  +VAL +Y+K  
Sbjct: 65  GVYLYGMQISPYAF-NTLTQLDPVRTRKLLLKKTEIRRLSRAVEIKGMALVALEVYFKRG 123

Query: 122 WCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           W KV IG+ +GKK  DK+  IK+R+   +  R  K  ++
Sbjct: 124 WAKVLIGLGRGKKAADKKETIKKRDIDREMRRDFKEKYK 162


>UniRef50_A8EWH6 SsrA-binding protein n=48 Tax=Epsilonproteobacteria
           RepID=SSRP_ARCB4
          Length = 158

 Score =  176 bits (447), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 59/160 (36%), Positives = 99/160 (61%), Gaps = 3/160 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M  KK  K     +  NK+A H++ I E  EAG+ L+G EVK++R G+ N+ DS+V +  
Sbjct: 1   MANKKDTKKN--LVFKNKKAFHDFTILETLEAGIVLEGSEVKAIREGRVNLKDSFVRIIK 58

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK- 119
           GE FL  A+I+ ++   +    D  R+RKLLL+ +++D +Y +V ++G T+VAL LY+  
Sbjct: 59  GEVFLLNAHISHLSTTHSTYRPDERRSRKLLLHSKQIDKMYSKVTKDGITLVALKLYFND 118

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
               K+++  A+GKK HDKR D+K +  + +  +++K+  
Sbjct: 119 KNMIKIEVATAQGKKLHDKREDLKAKTMKRETEQVLKSFK 158


>UniRef50_B1AI43 SsrA-binding protein n=16 Tax=Mycoplasmataceae RepID=SSRP_UREP2
          Length = 141

 Score =  176 bits (447), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 49/140 (35%), Positives = 78/140 (55%), Gaps = 1/140 (0%)

Query: 13  TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
            I  NK AR  Y + + FE G+ L+G EVKS+     +I+++YV +   +A +   ++  
Sbjct: 1   MIVSNKHARRNYELLDFFECGIVLKGTEVKSISRANCSINEAYVQIIKNQALILNMHVAN 60

Query: 73  MAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKG 132
               +     DP R RKLLL+++E+  L   V  +  T+V   +YWKN   K++I + KG
Sbjct: 61  FFEGNN-FNQDPYRNRKLLLHKKEIIRLQHLVKTQHMTIVPTKIYWKNNKLKIEIALGKG 119

Query: 133 KKQHDKRSDIKEREWQVDKA 152
           K+ HDKR DIK+R+   +  
Sbjct: 120 KQLHDKREDIKKRDLARETR 139


>UniRef50_C5JAN1 SsrA-binding protein n=1 Tax=uncultured bacterium
           RepID=C5JAN1_9BACT
          Length = 153

 Score =  175 bits (446), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 61/152 (40%), Positives = 95/152 (62%), Gaps = 4/152 (2%)

Query: 11  SATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYV--LLRDGEAFLFGA 68
              IALNK A+ +Y + E  EAG+ L G+EVKS R G  +I +S+V  +   GE +LF A
Sbjct: 3   HKVIALNKLAKFDYSLLEVIEAGIVLTGFEVKSARLGGISIRESHVGEMQGSGELYLFNA 62

Query: 69  NITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NAWCKVKI 127
           N      A+T +  +P R RKLLL +R+++ L G+V+R+G+T++ + +Y+      K++I
Sbjct: 63  NFPEYIHATT-MKQEPKRPRKLLLGRRQINKLLGQVHRKGFTIIPVQMYFNEKGIIKIEI 121

Query: 128 GVAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
            +A+GK   DKR  IK REW  +K R++K + 
Sbjct: 122 ALAQGKNVVDKRETIKLREWDREKHRVLKASS 153


>UniRef50_Q3ARF1 SsrA-binding protein n=11 Tax=Chlorobiaceae RepID=SSRP_CHLCH
          Length = 157

 Score =  175 bits (444), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 55/160 (34%), Positives = 95/160 (59%), Gaps = 4/160 (2%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M+K+   +   A +  N++ARHE+ I E F AG+ L G EVKS+R G+A++++S+ ++  
Sbjct: 1   MSKQPQQRYAEAIV--NRKARHEFEIIETFVAGIQLAGSEVKSVRLGQASLNESFAIILR 58

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK- 119
            E +L    ITP       V  +  R+RKLLL+++E+  L  +V+ +G T+V L  ++  
Sbjct: 59  NEVWLENMQITPYKHNRMEV-LEAKRSRKLLLHKKEIAKLQAKVSEKGLTLVPLKAFFTP 117

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
           +   K+++ +A+GKK +DKR  +K RE Q    ++ K   
Sbjct: 118 HGLLKIELAIARGKKLYDKRETLKNRENQRHLDQLRKQYS 157


>UniRef50_Q2ST23 SsrA-binding protein n=4 Tax=Mollicutes RepID=SSRP_MYCCT
          Length = 148

 Score =  174 bits (442), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 52/147 (35%), Positives = 90/147 (61%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
               I  NK+A   Y I + ++AG+ L G E+KS+R    +I++++VL+R  E ++   N
Sbjct: 2   SEHLIVKNKKAYFNYEIIQTYQAGIVLNGPEIKSIRNHDVSINEAFVLIRKKEIYILNMN 61

Query: 70  ITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGV 129
           +     A+     + TRTRKLLL+++E+  +  ++ +E  T++ + LY+KN + K++I +
Sbjct: 62  VKKYQFANYIKGLEETRTRKLLLHKKEIIKILNKIKQENLTIIPIKLYFKNDYVKLEIAL 121

Query: 130 AKGKKQHDKRSDIKEREWQVDKARIMK 156
           AKGKK HDKR  IK+R+ +  + R  K
Sbjct: 122 AKGKKLHDKRQTIKKRDTERKELRDYK 148


>UniRef50_B8D947 SsrA-binding protein n=4 Tax=Buchnera aphidicola RepID=SSRP_BUCA5
          Length = 162

 Score =  174 bits (442), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 73/157 (46%), Positives = 113/157 (71%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M +KK ++  S+ I +NK+A + YFIE+ F++GL L+GWE+KS+R+GK NIS+SY++   
Sbjct: 1   MLQKKKYQKKSSKIIINKKAYYNYFIEKVFQSGLVLEGWEIKSIRSGKVNISESYIINDR 60

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
            E +L    I P+ ++S    CDPTR +KLLL++ E+D L  +    GYT+V+LSL+WK 
Sbjct: 61  NEMYLCNCLIEPLQMSSNRFSCDPTRKKKLLLHKNEIDFLSLKKKNTGYTMVSLSLFWKK 120

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKN 157
           +WCK++ G+AKGK   DKR ++K+REW+ +K +I+K 
Sbjct: 121 SWCKLEFGLAKGKTAQDKRINLKKREWEQEKLKILKK 157


>UniRef50_A0M3P0 SsrA-binding protein n=13 Tax=Bacteroidetes RepID=SSRP_GRAFK
          Length = 157

 Score =  173 bits (439), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 53/151 (35%), Positives = 84/151 (55%), Gaps = 2/151 (1%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
            ++    N++A+  Y   +++ AG+ L G E+K++R GKANI++S+    + E F+   +
Sbjct: 8   KNSINIKNRKAKFNYEFLDKYTAGIKLAGTEIKAIREGKANIAESFCEFNNHELFVINMH 67

Query: 70  ITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NAWCKVKIG 128
           +   + A TH   +P   RKLLL +REL  L   V   G T++ L L+       K++I 
Sbjct: 68  VEEYSHA-THFNHNPRSQRKLLLQRRELRKLEKEVTNSGLTIIPLRLFINDRGLAKLQIS 126

Query: 129 VAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
           +AKGKK +DKR  IK+RE +    RI K   
Sbjct: 127 LAKGKKLYDKRETIKDRESKRRLDRIQKEYK 157


>UniRef50_B3EUI8 SsrA-binding protein n=4 Tax=Bacteroidetes RepID=B3EUI8_AMOA5
          Length = 156

 Score =  172 bits (437), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 53/154 (34%), Positives = 85/154 (55%), Gaps = 5/154 (3%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M  KK    G   +  NK+A  EY   ++F AG+ L G E+KS+R  K ++ ++Y   + 
Sbjct: 1   MNVKKNKTTG--LVIRNKQASFEYTFIDKFIAGIVLTGTEIKSIRKAKVSLQEAYCYFKS 58

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-K 119
           GE ++   +I      + +      R RKLLL ++EL+ L  +   +G T++ + L+  +
Sbjct: 59  GELWIKSMHIAQYEQGNIY-NHVENRERKLLLTRKELNKLI-KNQEKGLTIIPIQLFIDE 116

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKAR 153
           N   K++I +AKGKK +DKR  IKER+ Q D  R
Sbjct: 117 NNRAKLQIALAKGKKLYDKRQHIKERDVQRDMER 150


>UniRef50_B7GAQ2 Predicted protein (Fragment) n=3 Tax=Bacillariophyta
           RepID=B7GAQ2_PHATR
          Length = 160

 Score =  171 bits (434), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 3/159 (1%)

Query: 4   KKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDG-- 61
           KK +K   +TI++N+ A   Y I +  EAG++L G EVKS+R GK N+ D Y+       
Sbjct: 1   KKKNKTRDSTISVNRVAYRNYEIVDTIEAGISLVGTEVKSIRNGKLNLRDGYIRPTKDGR 60

Query: 62  EAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-N 120
              L+  +I   + A      + TR R LL+++ E      +  ++G T+V L  Y+   
Sbjct: 61  SCILYNVHIGKHSQAGAFFQHEETRPRALLVHKAEARKFLQQTEQQGMTIVPLKAYYNDK 120

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAH 159
              K++I + +GK   DKR  IKER+ + ++ RI+K+  
Sbjct: 121 NRVKLQIALCRGKNVRDKRVTIKERDAKREERRIIKSFR 159


>UniRef50_Q11TP3 SsrA-binding protein n=36 Tax=Bacteroidetes RepID=SSRP_CYTH3
          Length = 153

 Score =  168 bits (427), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 53/152 (34%), Positives = 84/152 (55%), Gaps = 2/152 (1%)

Query: 4   KKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEA 63
               +        NK+A  EY   E++EAG+ L+G E+K++R  KA+IS++Y L  + E 
Sbjct: 1   MSTKEIVKNVNIKNKKASFEYEFLEKYEAGIVLKGTEIKAIRMSKASISEAYCLFDNEEL 60

Query: 64  FLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NAW 122
           ++   NI+     S     DP   RKLLL + EL  L+     +G T++AL L+     +
Sbjct: 61  WIKNMNISSYDKGS-FYNHDPLSARKLLLRKAELKKLFMHSKEKGLTIIALRLFTNERGY 119

Query: 123 CKVKIGVAKGKKQHDKRSDIKEREWQVDKARI 154
            K++I +AKGKK +DKR  IK ++ + +  RI
Sbjct: 120 AKIEIALAKGKKLYDKRESIKSKDNEREMQRI 151


>UniRef50_P75043 SsrA-binding protein n=2 Tax=Mycoplasma RepID=SSRP_MYCPN
          Length = 147

 Score =  165 bits (419), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 46/143 (32%), Positives = 83/143 (58%), Gaps = 1/143 (0%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             +  N RA+++Y++   + AGL L+G EVKSL  G+ ++ ++YV +   E ++   +I+
Sbjct: 2   RVLVNNPRAQYDYYLLTGYCAGLVLKGSEVKSLALGQGSLKEAYVFIDKHEVYIKDFSIS 61

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
           P A +         R +KLLLN+ E+  +  R  +EG +++ L +++KN   K++I +AK
Sbjct: 62  PYAFSGE-FNHPFKRVKKLLLNRNEIKQITARQKQEGLSIIPLKVFFKNGKIKMEIWLAK 120

Query: 132 GKKQHDKRSDIKEREWQVDKARI 154
            KK+ DKR  IK +  Q +  + 
Sbjct: 121 PKKKFDKREAIKSKTIQRELRQQ 143


>UniRef50_B1GZD8 SsrA-binding protein SmpB n=1 Tax=uncultured Termite group 1
           bacterium phylotype Rs-D17 RepID=B1GZD8_UNCTG
          Length = 153

 Score =  164 bits (416), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 51/147 (34%), Positives = 83/147 (56%), Gaps = 2/147 (1%)

Query: 10  GSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
              T++ N++A + Y I E+ E G+ L G+EVKS R    ++ DS V   D EAF     
Sbjct: 6   KKKTLSSNRKAYYNYEILEKLETGIVLSGYEVKSARQSNISLVDSVVRFSDCEAFAENMF 65

Query: 70  ITPMAVASTHVV-CDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-KNAWCKVKI 127
           I      STH+   D  R RKLL+++ E++ +  +V  +G TV+ L +Y       K+ I
Sbjct: 66  IASYEQISTHIADYDAKRKRKLLMHKSEINKMRTKVKEKGLTVIPLEVYIGNRGKIKLLI 125

Query: 128 GVAKGKKQHDKRSDIKEREWQVDKARI 154
           G+AKGKK ++K+  +K+++ + + AR 
Sbjct: 126 GLAKGKKTYNKKEALKKKDIEREVARE 152


>UniRef50_Q6Q8U8 Predicted SsrA n=1 Tax=uncultured marine gamma proteobacterium
           EBAC20E09 RepID=Q6Q8U8_9GAMM
          Length = 156

 Score =  163 bits (414), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 60/154 (38%), Positives = 93/154 (60%), Gaps = 1/154 (0%)

Query: 7   HKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLF 66
            K  +  I  NK A   + + E F+AG+ L+GWEVKSLR  K ++ +SYV +R GEA+L 
Sbjct: 2   SKEKTVLIVKNKNASRNFKLNESFQAGIVLEGWEVKSLRDSKVDVKNSYVNIRKGEAWLI 61

Query: 67  GANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVK 126
           G  I  +  +      D T++RKLLL+++E+  +      +G T V   +YWK+   K  
Sbjct: 62  GVKID-IPASLQQENIDTTKSRKLLLHKKEIAKIERLKGEKGLTCVLTRIYWKDNLIKCD 120

Query: 127 IGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           I + +GKK  D+R DIK+R+W+ D+ RI+KN+ +
Sbjct: 121 IAMGQGKKHRDQREDIKKRDWERDQGRILKNSKK 154


>UniRef50_C6X237 TmRNA-binding protein SmpB n=2 Tax=Flavobacteriales
           RepID=C6X237_FLAB3
          Length = 155

 Score =  162 bits (410), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 60/159 (37%), Positives = 86/159 (54%), Gaps = 5/159 (3%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M K K  K       LN+RAR EY + EE EAG+ L G E+KSLR+ KA+I+D++    D
Sbjct: 1   MFKMKIEKS---VTILNRRARFEYELLEEIEAGMVLTGTEIKSLRSSKASITDAFCQFID 57

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK- 119
           GE ++    I    +  T       R RKLLL++ EL     ++   G T++ L +Y   
Sbjct: 58  GELYIINMMIDEYKLG-TFYNHKTKRERKLLLHKTELKKFEKKLKDVGNTIIPLKMYINA 116

Query: 120 NAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNA 158
               K+ I V +GKK  DKR  IK+RE + +  RI+K +
Sbjct: 117 KGKAKILIAVGRGKKLFDKRESIKDRENKRNIDRILKKS 155


>UniRef50_Q89AM9 SsrA-binding protein n=1 Tax=Buchnera aphidicola (Baizongia
           pistaciae) RepID=SSRP_BUCBP
          Length = 158

 Score =  161 bits (408), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 63/157 (40%), Positives = 102/157 (64%), Gaps = 2/157 (1%)

Query: 1   MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD 60
           M +    KP    I +N++A++ + I+E FEAG+ L GWEVKS+R GK NIS+SY+ L++
Sbjct: 1   MKRNSNRKPNE--ICINRKAKYSFSIKETFEAGIVLLGWEVKSVRCGKINISNSYISLKN 58

Query: 61  GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
           GE +L  +   P++ ++ ++  +  R +K+LL +RE+  LY ++ +   T++ LS+++K 
Sbjct: 59  GEMYLVNSQFDPISKSNLYITYECNRIKKILLRKREITYLYSKLYKSHLTIIVLSIFFKK 118

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKN 157
            WCKVKIG+AKGK   DKR   K  EW+  + R +K 
Sbjct: 119 QWCKVKIGIAKGKTIKDKREHKKLSEWKKTQNRFVKR 155


>UniRef50_B1VAG4 SsrA-binding protein n=2 Tax=Candidatus Phytoplasma
           RepID=B1VAG4_PHYAS
          Length = 176

 Score =  161 bits (408), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 96/149 (64%), Gaps = 2/149 (1%)

Query: 12  ATIALNKRARHEYFIEEE-FEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI 70
            TIA NK+A  ++F+E++ + AG+ L G EVKS+R GK ++++SY  +++ E F+   +I
Sbjct: 28  KTIATNKKAVFDFFLEKKKYHAGIKLLGNEVKSIRLGKISLNNSYAYIKNNEIFIVNLSI 87

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVA 130
                 S  +  D  RT+KLLL ++E+  +  ++  +G++V+ L +Y++    KV+I +A
Sbjct: 88  LKYPF-SCCMQYDENRTKKLLLRKQEIIQIQNKIKTQGFSVIPLKVYFEKNLVKVEIVLA 146

Query: 131 KGKKQHDKRSDIKEREWQVDKARIMKNAH 159
           KGKK++DKR+ +KE+  Q+   + +K  +
Sbjct: 147 KGKKKYDKRNSLKEKAAQLSIQKNLKKIN 175


>UniRef50_UPI00016992A0 SsrA-binding protein n=1 Tax=Endoriftia persephone
           'Hot96_1+Hot96_2' RepID=UPI00016992A0
          Length = 148

 Score =  161 bits (408), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 61/107 (57%), Positives = 89/107 (83%)

Query: 13  TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
           TIALNK+A+H+YFIEE +EAG+AL+GWEVKSLRAG+ N++++YV++  GEA+LFGANI+P
Sbjct: 16  TIALNKKAKHDYFIEERYEAGVALEGWEVKSLRAGRINLTEAYVIINKGEAYLFGANISP 75

Query: 73  MAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK 119
           +   S+H+  +PTR RKLLL++ EL+ L G V R+G+T+V  ++Y +
Sbjct: 76  LPTVSSHIQPNPTRNRKLLLHRTELNKLIGLVERKGFTLVPTAMYLE 122


>UniRef50_Q0SPD1 SsrA-binding protein n=20 Tax=Borrelia RepID=SSRP_BORAP
          Length = 150

 Score =  159 bits (404), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 50/148 (33%), Positives = 89/148 (60%), Gaps = 1/148 (0%)

Query: 11  SATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI 70
           +  +  NK+A+  YFIEE+   G+ L+G EVKS++A K + ++S+ +++  E +L   ++
Sbjct: 4   NTLLIENKKAKFNYFIEEKISCGIVLKGTEVKSIKAKKLSFNNSFAIIKKEELWLENLHV 63

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVA 130
           +     +     D  R RKLL+ ++EL  L     +EGYT++ +S Y K +  KV++G+ 
Sbjct: 64  SKYKEGNI-FNHDELRPRKLLIKKKELQRLKKFKEKEGYTLIPISFYLKKSIIKVEVGIC 122

Query: 131 KGKKQHDKRSDIKEREWQVDKARIMKNA 158
           KGKK +DKR  +K++  + D +R +K  
Sbjct: 123 KGKKLYDKREILKQKSIKKDLSREIKYK 150


>UniRef50_Q7VRQ2 TmRNA-binding protein n=2 Tax=Candidatus Blochmannia
           RepID=Q7VRQ2_BLOFL
          Length = 148

 Score =  157 bits (398), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 67/147 (45%), Positives = 98/147 (66%), Gaps = 1/147 (0%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           I  NKR  H+YFIE+E E GL L GWEVKS+R+ K  I +SYV LRD EA++  AN   +
Sbjct: 3   IIQNKRVHHKYFIEKEIETGLVLLGWEVKSIRSRKITIENSYVSLRDQEAYMCNANFQ-I 61

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGK 133
                    DPTR RKLLL ++EL  L   ++++ YT++ L+L+WKN+W K  IG+AKGK
Sbjct: 62  QTNMNVSTPDPTRMRKLLLKKQELSFLTEIMHKKSYTIIILNLFWKNSWIKANIGIAKGK 121

Query: 134 KQHDKRSDIKEREWQVDKARIMKNAHR 160
           K++DKR  +   +W++++  I+K  ++
Sbjct: 122 KKYDKRHIVNTHQWKLEQKHIIKCVNK 148


>UniRef50_Q1LSR7 SsrA-binding protein n=17 Tax=Gammaproteobacteria RepID=SSRP_BAUCH
          Length = 161

 Score =  154 bits (390), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 93/152 (61%), Positives = 123/152 (80%)

Query: 9   PGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGA 68
               TI  NKR R+EYFIE+EFEAG++L GWEVKSLRAG  +I+DSY+LL+D EAFL GA
Sbjct: 10  SKITTITQNKRVRYEYFIEQEFEAGISLLGWEVKSLRAGIVHINDSYILLKDSEAFLLGA 69

Query: 69  NITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIG 128
            + P+ VAS+H++  P R+RKLLL +RELD+L G+V+R+GYT+V +SLYW+N+  K+++G
Sbjct: 70  TLRPLIVASSHILYSPMRSRKLLLRRRELDTLLGKVHRKGYTIVPISLYWRNSLAKIQLG 129

Query: 129 VAKGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           +AKGKKQ+DKR  IKEREW ++KARI K  HR
Sbjct: 130 IAKGKKQYDKRHCIKEREWLLNKARITKLVHR 161


>UniRef50_A5KSW6 SsrA-binding protein n=2 Tax=candidate division TM7
           RepID=A5KSW6_9BACT
          Length = 154

 Score =  154 bits (389), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 6/157 (3%)

Query: 3   KKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGE 62
           KKK    G+    LN+RA+ +Y + +E   GL L G EV++ R G   +  +YV +R+ E
Sbjct: 2   KKKTTTSGA---VLNRRAKFDYELGDELAVGLVLNGPEVRAARDGHVQLKGAYVTIRNDE 58

Query: 63  AFLFGANIT--PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN 120
            +L  A+ +  P            T+ RKLL +++++ +L  +  + G T+V L L+   
Sbjct: 59  LWLNNASFSVKPAQPKRGDARAVDTQPRKLLAHRKQIATLAEQ-KKTGLTIVPLKLFTSG 117

Query: 121 AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKN 157
              K+ I   KGKK++DKR  +K R  + +  R M+ 
Sbjct: 118 RHIKLLIAAGKGKKKYDKRETLKRRAQEREAQRAMRR 154


>UniRef50_Q601U1 SsrA-binding protein n=3 Tax=Mycoplasma hyopneumoniae
           RepID=SSRP_MYCH2
          Length = 145

 Score =  153 bits (388), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 48/147 (32%), Positives = 80/147 (54%), Gaps = 4/147 (2%)

Query: 13  TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
            +  NKRA  +Y I + F AG+ L GWEVKS++A   ++  ++   +  E FL  A I+ 
Sbjct: 3   ILIKNKRANFDYEIIDRFTAGIVLLGWEVKSIQAKNISLVGAFCYFKGHELFLSNAKISE 62

Query: 73  MAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKG 132
              +         R+RKLL+++ EL  +          ++ L +  KN   K++I +AKG
Sbjct: 63  YKGSRGQ----TDRSRKLLMHKHELKKILKEKITRKLAIIPLFIGQKNRKIKLEIALAKG 118

Query: 133 KKQHDKRSDIKEREWQVDKARIMKNAH 159
           K + DKR+ IKER+ + + A+ +KN +
Sbjct: 119 KTKLDKRNLIKERDQKREAAKFLKNYY 145


>UniRef50_Q6YR70 SsrA-binding protein n=3 Tax=Candidatus Phytoplasma asteris
           RepID=SSRP_ONYPE
          Length = 152

 Score =  153 bits (388), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 52/150 (34%), Positives = 94/150 (62%), Gaps = 2/150 (1%)

Query: 12  ATIALNKRARHEYFIEEE-FEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI 70
            TI  NK+A ++Y +E++ ++AG+ L G EVKS+R GK N+ +SY+ +++ EAF+    I
Sbjct: 2   KTIITNKKAFYDYSLEKKKYQAGIKLLGSEVKSIRIGKINLLNSYIHIKNEEAFIVNMTI 61

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVA 130
                 S  +  D  RT+KLLL + E+  +  ++  E  +V+ L +Y+     K++I ++
Sbjct: 62  LKYPF-SCCLAYDENRTKKLLLQKHEIIQIKNKIKTEKLSVIPLKVYFNKNLVKLEIALS 120

Query: 131 KGKKQHDKRSDIKEREWQVDKARIMKNAHR 160
           KGKKQHDKR+ +K+ + ++   + +KN ++
Sbjct: 121 KGKKQHDKRNALKDFDAKLRIQKTLKNFNQ 150


>UniRef50_Q6KI26 SsrA-binding protein n=1 Tax=Mycoplasma mobile RepID=SSRP_MYCMO
          Length = 142

 Score =  150 bits (379), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 49/143 (34%), Positives = 81/143 (56%), Gaps = 4/143 (2%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             I  NK A   Y I E+++AGL L+GWEVKS+R  K  +  +++  ++ EA++   +I+
Sbjct: 2   KIIIKNKDAFFNYEILEKYKAGLILKGWEVKSIRENKVQLKGAFITFKNDEAYITNMHIS 61

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
                   V  +    RKLLLN+ E+  +  + NR    V+ L+L+W N + K++I +AK
Sbjct: 62  QYMS----VKGNELEPRKLLLNKHEIRHIQDKKNRNSLAVIPLNLFWDNNYIKLEIALAK 117

Query: 132 GKKQHDKRSDIKEREWQVDKARI 154
           GK + DKR  I E++ +    +I
Sbjct: 118 GKTKADKRHRILEKDVRKHLKKI 140


>UniRef50_B3PM30 SsrA-binding protein n=2 Tax=Mycoplasma RepID=B3PM30_MYCA5
          Length = 143

 Score =  149 bits (376), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 51/145 (35%), Positives = 74/145 (51%), Gaps = 5/145 (3%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLL-RDGEAFLFGANI 70
           A I  NK  + EY I   +E G++L GWE KSLRA  A +  S+  + +  E +L  A I
Sbjct: 2   ALIVKNKFPKLEYEIHSTYECGISLLGWEAKSLRAKNAKLESSFCSISQSDELWLNNAYI 61

Query: 71  TPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVA 130
                    V  DP R+RKLL+++ E+  L     R     + LS YW+    KV+I +A
Sbjct: 62  AQY----MLVKGDPLRSRKLLMHRHEIKKLRSLQQRLNLIFIPLSFYWRGNKIKVEIALA 117

Query: 131 KGKKQHDKRSDIKEREWQVDKARIM 155
           K   +HDKR  IK+ E +     ++
Sbjct: 118 KHLNKHDKREKIKKDEAKKFIKAVL 142


>UniRef50_A9G6R4 SmpB-like protein n=1 Tax=Sorangium cellulosum 'So ce 56'
           RepID=A9G6R4_SORC5
          Length = 139

 Score =  149 bits (376), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 52/122 (42%), Positives = 74/122 (60%), Gaps = 2/122 (1%)

Query: 34  LALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLN 93
           + L G EVK LR G A ++DS+  + +GEAFL G NI  M  A+     +  R RKLLL+
Sbjct: 1   MVLLGSEVKMLRDGAAELTDSWCAIENGEAFLKGVNIPVMPGAA--FGHEAKRPRKLLLH 58

Query: 94  QRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKAR 153
           + E++++   V REG TV+A  LY+KN   K +I +AKGKK  DKR  +KE++   +   
Sbjct: 59  ESEIEAIRKSVEREGMTVIATRLYFKNGRVKAEIALAKGKKTVDKRESLKEKDATREARA 118

Query: 154 IM 155
            M
Sbjct: 119 AM 120


>UniRef50_Q7NB37 SsrA-binding protein n=1 Tax=Mycoplasma gallisepticum
           RepID=SSRP_MYCGA
          Length = 144

 Score =  148 bits (374), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 49/142 (34%), Positives = 80/142 (56%), Gaps = 1/142 (0%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             +  NK+A++ Y + +++EAG++L G EVKSL      + DSYV++R  EA+L    I 
Sbjct: 3   RLLVNNKKAKYNYELLDKYEAGISLSGNEVKSLALHHGKLDDSYVIIRKNEAYLLNLLIP 62

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
                ++ V  + TRTRKLLL++ E+  +     +    ++   +Y+ N   KV I +A+
Sbjct: 63  KYKFDTSKV-LNETRTRKLLLHKSEILKIDLIKKQHSLVIIPYQIYFVNNKIKVSIYLAR 121

Query: 132 GKKQHDKRSDIKEREWQVDKAR 153
            KK++DKR  IKERE      +
Sbjct: 122 PKKRYDKRQTIKEREINKKIRK 143


>UniRef50_C1D1M8 Putative SsrA-binding protein n=1 Tax=Deinococcus deserti VCD115
           RepID=C1D1M8_DEIDV
          Length = 143

 Score =  145 bits (367), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 54/139 (38%), Positives = 81/139 (58%), Gaps = 1/139 (0%)

Query: 14  IALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPM 73
           +  N+RA +EY + E FEAG++L G EVKS+RAG  +  D++  L  G   L G  I   
Sbjct: 4   VYTNRRAHYEYELLERFEAGISLTGSEVKSIRAGGVDFRDAFARLHGGNVDLEGLYIPAY 63

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGK 133
             A T+   +P RTR+LLLN+ E+  L   + ++G T+V   LY K  + KV++ +A+GK
Sbjct: 64  KEA-TYNNHEPRRTRRLLLNRMEILKLKKGLEQKGLTLVPTRLYQKGQYFKVELALARGK 122

Query: 134 KQHDKRSDIKEREWQVDKA 152
           K HDKR    E+  + +  
Sbjct: 123 KLHDKRRADAEKTVRRELR 141


>UniRef50_Q057R8 TmRNA-binding protein n=1 Tax=Buchnera aphidicola str. Cc (Cinara
           cedri) RepID=Q057R8_BUCCC
          Length = 156

 Score =  143 bits (361), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 52/136 (38%), Positives = 85/136 (62%)

Query: 22  HEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVASTHVV 81
           + ++I+++F +G+ LQGWEVKS+RAG   ISD +V++++ E +L      P+   S    
Sbjct: 17  YNFYIKKKFISGIELQGWEVKSIRAGHVQISDGHVIIKNNEVYLTNVQFQPLIYTSDLKF 76

Query: 82  CDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSD 141
           C   R RKLLL ++E+  L     ++GYT+V + L+W  +WCK+KI + KGK + DKR D
Sbjct: 77  CLSNRVRKLLLKKKEIFFLKMYSIKKGYTIVPIKLFWIKSWCKIKIALVKGKSKMDKRQD 136

Query: 142 IKEREWQVDKARIMKN 157
            +   W++++  I K 
Sbjct: 137 KRNNSWKIERDTIFKR 152


>UniRef50_A5IZI0 SsrA-binding protein n=3 Tax=Mycoplasma RepID=SSRP_MYCAP
          Length = 147

 Score =  141 bits (356), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 48/149 (32%), Positives = 84/149 (56%), Gaps = 6/149 (4%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             I+ N++  + Y I E+ EAG++L GWEVKS RA   N+++SY+  + GE FL  AN  
Sbjct: 2   KVISENRKGLYGYKIIEKHEAGISLLGWEVKSARAQTVNLTNSYIFFKKGELFLCNANFA 61

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVV-ALSLYWKN-AWCKVKIGV 129
                   +  +  R RKLL++++E+  L  +++R   T +    +Y+ N +  KV+I +
Sbjct: 62  KY----MLLKVEEDRDRKLLMHKKEIIRLKNKLDRLSSTTIKPTKIYFNNKSKIKVEIAL 117

Query: 130 AKGKKQHDKRSDIKEREWQVDKARIMKNA 158
            +G  + DKR D+K+R+ +    ++  N 
Sbjct: 118 VQGMNRADKREDLKKRDNEKYMQKVKSNY 146


>UniRef50_Q8D389 SmpB protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of
           Glossina brevipalpis RepID=Q8D389_WIGBR
          Length = 160

 Score =  136 bits (343), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 70/155 (45%), Positives = 106/155 (68%)

Query: 3   KKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGE 62
           KKK  +     I+ NKRA++  +I++E EAGL+L+GWEVKSLR+   +IS SYV L+   
Sbjct: 2   KKKNTEKNFLIISRNKRAKYNTYIKKEMEAGLSLKGWEVKSLRSNNISISTSYVTLKSSS 61

Query: 63  AFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAW 122
           A+L GA        + + + +  R  +LLL++ E++SL+G V  +GY++V +SLYWK   
Sbjct: 62  AYLTGAVFQSNTNNNMNFIYEKERNIQLLLHKHEINSLFGYVKIKGYSIVVISLYWKYHK 121

Query: 123 CKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKN 157
            K+KIG+AKGKK+ DKR +IK+REW++ K+R+ K 
Sbjct: 122 AKLKIGIAKGKKKIDKRLEIKKREWEIKKSRLFKK 156


>UniRef50_A8Z637 SsrA (TmRNA)-binding protein n=2 Tax=Candidatus Sulcia muelleri
           RepID=A8Z637_SULMW
          Length = 146

 Score =  133 bits (335), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/141 (26%), Positives = 77/141 (54%), Gaps = 6/141 (4%)

Query: 15  ALNKRARHEYFIEEEFE--AGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
             N+RA  +Y +  +++  AG+ L G EVKS++    ++++SY  L     ++F   I+ 
Sbjct: 7   INNRRAYFDYELINKYKFIAGIELLGSEVKSIKNNNVSLNNSYCKLIKNNIYVFDMYISN 66

Query: 73  MAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NAWCKVKIGVAK 131
             +    +  +P R +KLLL ++E++ +Y ++N     ++  +++     + K+   +AK
Sbjct: 67  YLLG---INFNPKRVKKLLLKRKEINFIYNKINELKLNIIPTNIFLNERGYIKLIFFLAK 123

Query: 132 GKKQHDKRSDIKEREWQVDKA 152
            KK +DKR  IK + ++ +K 
Sbjct: 124 SKKNYDKRQSIKNKYFEREKN 144


>UniRef50_Q4A5T2 SsrA-binding protein n=2 Tax=Mycoplasma RepID=SSRP_MYCS5
          Length = 143

 Score =  127 bits (319), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 38/127 (29%), Positives = 70/127 (55%), Gaps = 6/127 (4%)

Query: 12  ATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANIT 71
             IA NK A+  Y I + FEAG+ L+GWEVKS RA    + ++Y  +   E FL  +   
Sbjct: 2   KIIATNKNAKRNYEILKTFEAGIKLEGWEVKSARASSVELKNAYCSIYKDEVFLKESYFK 61

Query: 72  PMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWK-NAWCKVKIGVA 130
                   +  + T+ RKLLL+++E+  +   + ++  +++   +Y+  N+  KV++ + 
Sbjct: 62  KY----MLLKVEETKNRKLLLHKKEILKIKQEL-QKNLSLIPTKIYFNSNSLIKVELALG 116

Query: 131 KGKKQHD 137
           +G K++D
Sbjct: 117 RGLKKYD 123


>UniRef50_D0N0I1 Putative uncharacterized protein n=1 Tax=Phytophthora infestans
           T30-4 RepID=D0N0I1_PHYIN
          Length = 180

 Score =  125 bits (314), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 11/152 (7%)

Query: 12  ATIALN-----KRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLF 66
             +  N     K A + Y +E E+  G+ LQ  EVKSLR   A++S ++      E FL 
Sbjct: 33  KVLCRNQKFVRKAAGNYYEVEREWNLGIVLQPSEVKSLRNRNADLSTAFGAFYKHELFLH 92

Query: 67  GANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN-AWCKV 125
             NI            +PTR RKLL N+ EL  L    NR    ++ + +   N  W KV
Sbjct: 93  DLNIPVWRQG-LIGRPEPTRVRKLLANRSELKKLQEFANRPNAQLIPMRIEVGNTGWIKV 151

Query: 126 KIGVAKGKKQHDKRSDIKEREWQVDKARIMKN 157
            +     + Q D R     R+ + +  R +++
Sbjct: 152 IMAACFKRGQIDNR----RRDDEREIKRQLRD 179


>UniRef50_C6SHY7 SsrA-binding protein n=1 Tax=Neisseria meningitidis alpha275
           RepID=C6SHY7_NEIME
          Length = 146

 Score =  118 bits (296), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 42/84 (50%), Positives = 59/84 (70%)

Query: 74  AVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGK 133
             ASTH+  D  R RKLLLNQ E++ L G+  R GYT+V L L++     K++IG+AKGK
Sbjct: 61  PTASTHIKPDAVRPRKLLLNQSEINKLIGKTERAGYTIVPLDLHFSRGKIKMEIGLAKGK 120

Query: 134 KQHDKRSDIKEREWQVDKARIMKN 157
           KQHDKR  +KE +W+ +K R++K+
Sbjct: 121 KQHDKRQSMKEADWKREKQRLIKH 144


>UniRef50_C7LKD3 SsrA (TmRNA)-binding protein n=1 Tax=Candidatus Sulcia muelleri
           SMDSEM RepID=C7LKD3_SULMS
          Length = 150

 Score = 91.2 bits (226), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/141 (28%), Positives = 74/141 (52%), Gaps = 5/141 (3%)

Query: 12  ATIALNKRARHEYFIE--EEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGAN 69
             I  NK+A  +Y +   E+F AG+ L G EVK ++  K +I +SY  L +   ++F   
Sbjct: 2   KLIINNKKAGFDYNLLKKEKFLAGIELLGIEVKLIKQKKVSIKNSYCKLINNNIYIFDMY 61

Query: 70  ITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN-AWCKVKIG 128
           I+   + +T     P R RKLLL ++E++ +  ++      ++   +   N  + K+K  
Sbjct: 62  ISNSNIYNTKFS--PKRRRKLLLKKKEINQIKKQIKNLNLNIIPTEIVLNNRNFIKIKFF 119

Query: 129 VAKGKKQHDKRSDIKEREWQV 149
           +AK KK+++KR+  K +  + 
Sbjct: 120 LAKSKKKYEKRNLRKIKSLEK 140


>UniRef50_Q7P475 Small protein B n=1 Tax=Fusobacterium nucleatum subsp. vincentii
          ATCC 49256 RepID=Q7P475_FUSNV
          Length = 84

 Score = 83.1 bits (205), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/58 (48%), Positives = 44/58 (75%)

Query: 13 TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANI 70
           IA NK+A  +YFIEE++EAG+ L+G EVKS++AGK +I +S+V + + E F+ G ++
Sbjct: 2  IIANNKKAFFDYFIEEKYEAGIELKGSEVKSIKAGKVSIKESFVRIINDEIFIMGMSV 59


>UniRef50_UPI0001912596 SsrA-binding protein n=1 Tax=Salmonella enterica subsp. enterica
          serovar Typhi str. E98-3139 RepID=UPI0001912596
          Length = 98

 Score = 61.9 bits (150), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 40/47 (85%), Positives = 42/47 (89%), Gaps = 1/47 (2%)

Query: 3  KKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVK-SLRAGK 48
          ++KAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVK S R   
Sbjct: 6  EEKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKISARRKS 52


>UniRef50_Q05FT0 Putative uncharacterized protein n=1 Tax=Candidatus Carsonella
           ruddii PV RepID=Q05FT0_CARRP
          Length = 116

 Score = 42.3 bits (99), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 16/119 (13%)

Query: 13  TIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITP 72
            +  NK+   +YFI + F AG+ L+  ++  ++    NI+D  + L D    L       
Sbjct: 1   MLKKNKKILTKYFIIKTFIAGMILKSNDILIIKKNILNINDYIIKLSDNNINLIN----- 55

Query: 73  MAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAK 131
                        +   LLLN+RE + +      + Y  + + L+  N   K+KI + K
Sbjct: 56  -----------KKKKIILLLNKREQNIILYYNYNKNYKCIPIELFKLNFLFKLKISIVK 103


  Database: uniref50.fasta
    Posted date:  Mar 8, 2010 10:38 AM
  Number of letters in database: 1,040,396,356
  Number of sequences in database:  3,077,464
  
Lambda     K      H
   0.316    0.182    0.606 

Lambda     K      H
   0.267   0.0554    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,097,348,949
Number of Sequences: 3077464
Number of extensions: 73079243
Number of successful extensions: 186808
Number of sequences better than 1.0e-01: 123
Number of HSP's better than  0.1 without gapping: 245
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 186266
Number of HSP's gapped (non-prelim): 251
length of query: 160
length of database: 1,040,396,356
effective HSP length: 118
effective length of query: 42
effective length of database: 677,255,604
effective search space: 28444735368
effective search space used: 28444735368
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 88 (38.1 bits)
