Phyre 2 Results for P0A832

Email | l.a.kelley@imperial.ac.uk
Description | P0A832
Date | Thu Jan 5 11:06:45 GMT 2012
Unique Job ID | 49090ff2c04b7be7

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | d1p6va_ |
|  | 100.0 | 50 | Fold:Small protein B (SmpB) Superfamily:Small protein B (SmpB) Family:Small protein B (SmpB)
2 | c1p6vC_ |
|  | 100.0 | 50 | PDB header:rna binding protein/rna Chain: C: PDB Molecule:ssra-binding protein; PDBTitle: crystal structure of the trna domain of transfer-messenger2 rna in complex with smpb
3 | c1j1hA_ |
|  | 100.0 | 46 | PDB header:rna binding protein Chain: A: PDB Molecule:small protein b; PDBTitle: solution structure of a tmrna-binding protein, smpb, from2 thermus thermophilus
4 | d1wjxa_ |
|  | 100.0 | 51 | Fold:Small protein B (SmpB) Superfamily:Small protein B (SmpB) Family:Small protein B (SmpB)
5 | d2ipqx1 |
|  | 37.1 | 28 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:STY4665 C-terminal domain-like
6 | c2qnkA_ |
|  | 31.9 | 33 | PDB header:oxidoreductase Chain: A: PDB Molecule:3-hydroxyanthranilate 3,4-dioxygenase; PDBTitle: crystal structure of human 3-hydroxyanthranilate 3,4-dioxygenase
7 | c2agaA_ |
|  | 24.9 | 14 | PDB header:transcription Chain: A: PDB Molecule:machado-joseph disease protein 1; PDBTitle: de-ubiquitinating function of ataxin-3: insights from the2 solution structure of the josephin domain
8 | d1sdwa2 |
|  | 21.0 | 15 | Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins) Superfamily:PHM/PNGase F Family:Peptidylglycine alpha-hydroxylating monooxygenase, PHM
9 | d1zvfa1 |
|  | 19.7 | 15 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:3-hydroxyanthranilic acid dioxygenase-like
10 | d1yfua1 |
|  | 17.8 | 19 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:3-hydroxyanthranilic acid dioxygenase-like
11 | c1wqsA_ |
|  | 17.6 | 21 | PDB header:hydrolase Chain: A: PDB Molecule:3c-like protease; PDBTitle: crystal structure of norovirus 3c-like protease
12 | d1g31a_ |
|  | 15.1 | 36 | Fold:GroES-like Superfamily:GroES-like Family:GroES
13 | d2qfaa1 |
|  | 14.1 | 27 | Fold:Inhibitor of apoptosis (IAP) repeat Superfamily:Inhibitor of apoptosis (IAP) repeat Family:Inhibitor of apoptosis (IAP) repeat
14 | c3jsbA_ |
|  | 13.3 | 22 | PDB header:rna binding protein Chain: A: PDB Molecule:rna-directed rna polymerase; PDBTitle: crystal structure of the n-terminal domain of the lymphocytic2 choriomeningitis virus l protein
15 | c1hf9B_ |
|  | 11.0 | 21 | PDB header:atpase inhibitor Chain: B: PDB Molecule:atpase inhibitor (mitochondrial); PDBTitle: c-terminal coiled-coil domain from bovine if1
16 | c2quoA_ |
|  | 10.6 | 27 | PDB header:toxin Chain: A: PDB Molecule:heat-labile enterotoxin b chain; PDBTitle: crystal structure of c terminal fragment of clostridium2 perfringens enterotoxin
17 | d2raxa1 |
|  | 10.1 | 27 | Fold:Inhibitor of apoptosis (IAP) repeat Superfamily:Inhibitor of apoptosis (IAP) repeat Family:Inhibitor of apoptosis (IAP) repeat
18 | d1m4ma_ |
|  | 9.6 | 27 | Fold:Inhibitor of apoptosis (IAP) repeat Superfamily:Inhibitor of apoptosis (IAP) repeat Family:Inhibitor of apoptosis (IAP) repeat
19 | c2oa9B_ |
|  | 9.5 | 10 | PDB header:hydrolase Chain: B: PDB Molecule:r.mvai; PDBTitle: restriction endonuclease mvai in the absence of dna
20 | c2w3zA_ |
|  | 8.7 | 23 | PDB header:hydrolase Chain: A: PDB Molecule:putative deacetylase; PDBTitle: structure of a streptococcus mutans ce4 esterase
21 | d1d1na_ |
| not modelled | 8.3 | 20 | Fold:Reductase/isomerase/elongation factor common domain Superfamily:Translation proteins Family:Elongation factors
22 | d2c1ia1 |
| not modelled | 8.1 | 24 | Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:NodB-like polysaccharide deacetylase
23 | d2nlya1 |
| not modelled | 8.0 | 19 | Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:Divergent polysaccharide deacetylase
24 | d2cc0a1 |
| not modelled | 7.9 | 15 | Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:NodB-like polysaccharide deacetylase
25 | c3mjdA_ |
| not modelled | 7.9 | 22 | PDB header:transferase Chain: A: PDB Molecule:orotate phosphoribosyltransferase; PDBTitle: 1.9 angstrom crystal structure of orotate2 phosphoribosyltransferase (pyre) francisella tularensis.
26 | d1jd5a_ |
| not modelled | 7.3 | 26 | Fold:Inhibitor of apoptosis (IAP) repeat Superfamily:Inhibitor of apoptosis (IAP) repeat Family:Inhibitor of apoptosis (IAP) repeat
27 | c2ylaA_ |
| not modelled | 7.3 | 15 | PDB header:hydrolase Chain: A: PDB Molecule:beta-n-acetylhexosaminidase; PDBTitle: inhibition of the pneumococcal virulence factor strh and2 molecular insights into n-glycan recognition and3 hydrolysis
28 | c3rpmA_ |
| not modelled | 7.2 | 14 | PDB header:hydrolase Chain: A: PDB Molecule:beta-n-acetyl-hexosaminidase; PDBTitle: crystal structure of the first gh20 domain of a novel beta-n-acetyl-2 hexosaminidase strh from streptococcus pneumoniae r6
29 | c2z59A_ |
| not modelled | 7.0 | 29 | PDB header:protein transport Chain: A: PDB Molecule:protein adrm1; PDBTitle: complex structures of mouse rpn13 (22-130aa) and ubiquitin
30 | c2r2yA_ |
| not modelled | 7.0 | 29 | PDB header:protein binding Chain: A: PDB Molecule:protein adrm1; PDBTitle: crystal structure of the proteasomal rpn13 pru-domain
31 | d8ohma2 |
| not modelled | 6.9 | 24 | Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RNA helicase
32 | d2ieca1 |
| not modelled | 6.8 | 71 | Fold:MK0786-like Superfamily:MK0786-like Family:MK0786-like
33 | d1kk1a1 |
| not modelled | 6.6 | 36 | Fold:Reductase/isomerase/elongation factor common domain Superfamily:Translation proteins Family:Elongation factors
34 | d2i52a1 |
| not modelled | 6.5 | 71 | Fold:MK0786-like Superfamily:MK0786-like Family:MK0786-like
35 | c2ogfD_ |
| not modelled | 6.1 | 57 | PDB header:structural genomics, unknown function Chain: D: PDB Molecule:hypothetical protein mj0408; PDBTitle: crystal structure of protein mj0408 from methanococcus jannaschii,2 pfam duf372
36 | d1jaka1 |
| not modelled | 6.1 | 15 | Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:beta-N-acetylhexosaminidase catalytic domain
37 | c2crvA_ |
| not modelled | 6.1 | 29 | PDB header:translation Chain: A: PDB Molecule:translation initiation factor if-2; PDBTitle: solution structure of c-terminal domain of mitochondrial2 translational initiationfactor 2
38 | d1xb0b_ |
| not modelled | 6.0 | 27 | Fold:Inhibitor of apoptosis (IAP) repeat Superfamily:Inhibitor of apoptosis (IAP) repeat Family:Inhibitor of apoptosis (IAP) repeat
39 | d1yhta1 |
| not modelled | 5.9 | 20 | Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:beta-N-acetylhexosaminidase catalytic domain
40 | c2vm5A_ |
| not modelled | 5.9 | 27 | PDB header:apoptosis Chain: A: PDB Molecule:baculoviral iap repeat-containing protein 1; PDBTitle: human bir2 domain of baculoviral inhibitor of apoptosis2 repeat-containing 1 (birc1)
41 | d2gjxa1 |
| not modelled | 5.8 | 15 | Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:beta-N-acetylhexosaminidase catalytic domain
42 | d1mkya3 |
| not modelled | 5.8 | 9 | Fold:Alpha-lytic protease prodomain-like Superfamily:Probable GTPase Der, C-terminal domain Family:Probable GTPase Der, C-terminal domain
43 | c1oy7C_ |
| not modelled | 5.7 | 23 | PDB header:apoptosis/peptide Chain: C: PDB Molecule:baculoviral iap repeat-containing protein 7; PDBTitle: structure and function analysis of peptide antagonists of melanoma2 inhibitor of apoptosis (ml-iap)
44 | c2elvA_ |
| not modelled | 5.7 | 21 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 406; PDBTitle: solution structure of the 6th c2h2 zinc finger of human2 zinc finger protein 406
45 | d1im3d_ |
| not modelled | 5.7 | 28 | Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Cytomegalovirus protein US2
46 | d1gtda_ |
| not modelled | 5.6 | 23 | Fold:PurS-like Superfamily:PurS-like Family:PurS subunit of FGAM synthetase
47 | c2odiA_ |
| not modelled | 5.6 | 19 | PDB header:hydrolase/dna Chain: A: PDB Molecule:r.bcni; PDBTitle: restriction endonuclease bcni-cognate dna substrate complex
48 | d2i3ha1 |
| not modelled | 5.5 | 23 | Fold:Inhibitor of apoptosis (IAP) repeat Superfamily:Inhibitor of apoptosis (IAP) repeat Family:Inhibitor of apoptosis (IAP) repeat
49 | d3d9ta1 |
| not modelled | 5.5 | 26 | Fold:Inhibitor of apoptosis (IAP) repeat Superfamily:Inhibitor of apoptosis (IAP) repeat Family:Inhibitor of apoptosis (IAP) repeat
50 | d1q4qa_ |
| not modelled | 5.5 | 27 | Fold:Inhibitor of apoptosis (IAP) repeat Superfamily:Inhibitor of apoptosis (IAP) repeat Family:Inhibitor of apoptosis (IAP) repeat
51 | d1g73d_ |
| not modelled | 5.3 | 27 | Fold:Inhibitor of apoptosis (IAP) repeat Superfamily:Inhibitor of apoptosis (IAP) repeat Family:Inhibitor of apoptosis (IAP) repeat
52 | c3i7fA_ |
| not modelled | 5.3 | 25 | PDB header:ligase Chain: A: PDB Molecule:aspartyl-trna synthetase; PDBTitle: aspartyl trna synthetase from entamoeba histolytica
53 | d1j5ua_ |
| not modelled | 5.1 | 16 | Fold:MTH1598-like Superfamily:MTH1598-like Family:MTH1598-like