15/01/2012 18:00:58 : INFO  : Run start: Sun Jan 15 18:00:58 GMT 2012
15/01/2012 18:01:01 : INFO  : Initialised job
15/01/2012 18:01:02 : INFO  : Renaming log file 'phyre2_20120115_180058.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/49090ff2c04b7be7/phyre_20120115_180058.log'
15/01/2012 18:01:02 : INFO  : Initialised job:
Sequence
>batch____
MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD
GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN
AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR

15/01/2012 18:01:02 : INFO  : Checked sequence
15/01/2012 18:01:04 : INFO  : Finding homologues with PSI-BLAST
15/01/2012 18:01:05 : INFO  : PSI-BLAST 3 iterations
15/01/2012 18:01:50 : INFO  : PSI-BLAST 5 iterations
15/01/2012 18:02:54 : INFO  : Finished PSI-BLAST
15/01/2012 18:02:54 : INFO  : Running Buildali to generate a3m file
15/01/2012 18:07:02 : INFO  : Converting to HMM
15/01/2012 18:07:03 : INFO  : Calibrating HMM
15/01/2012 18:07:09 : INFO  : Searching HMM database
15/01/2012 18:10:34 : INFO  : Finished buildali
15/01/2012 18:10:35 : INFO  : Predicting secondary structure
15/01/2012 18:10:39 : INFO  : Predicted secondary structure (PSI-Pred)
15/01/2012 18:10:40 : INFO  : Predicting Disordered regions
15/01/2012 18:10:42 : INFO  : Predicted Disorder (Disopred)
15/01/2012 18:10:44 : INFO  : Running memsat_svm check
15/01/2012 18:11:13 : INFO  : Globular protein
15/01/2012 18:11:13 : INFO  : Predicted Transmembrane (memsat_svm) ID '49090ff2c04b7be7'
15/01/2012 18:11:14 : INFO  : Initialising fold library search
15/01/2012 18:11:15 : INFO  : Initialised search input
15/01/2012 18:11:15 : INFO  : Building Ensemble models
15/01/2012 18:11:17 : INFO  : Building hh.d1p6va_.model.1.pdb
15/01/2012 18:11:22 : INFO  : Building hh.c1p6vC_.model.2.pdb
15/01/2012 18:11:27 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/49090ff2c04b7be7/hh.c1p6vC_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/49090ff2c04b7be7/c1p6vC_.2.pdb
15/01/2012 18:11:30 : INFO  : Building hh.c1j1hA_.model.3.pdb
15/01/2012 18:11:38 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/49090ff2c04b7be7/hh.c1j1hA_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/49090ff2c04b7be7/c1j1hA_.3.pdb
15/01/2012 18:11:42 : INFO  : Building hh.d1wjxa_.model.4.pdb
15/01/2012 18:11:51 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/49090ff2c04b7be7/hh.d1wjxa_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/49090ff2c04b7be7/d1wjxa_.4.pdb
15/01/2012 18:11:53 : INFO  : Building d1p6va_.1.pdb
15/01/2012 18:12:04 : INFO  : Building c1p6vC_.2.pdb
15/01/2012 18:12:18 : INFO  : Building c1j1hA_.3.pdb
15/01/2012 18:12:31 : INFO  : Building d1wjxa_.4.pdb
15/01/2012 18:12:47 : INFO  : Building d2ipqx1.5.pdb
15/01/2012 18:13:03 : INFO  : Building c2qnkA_.6.pdb
15/01/2012 18:13:16 : INFO  : Building c2agaA_.7.pdb
15/01/2012 18:13:28 : INFO  : Building d1sdwa2.8.pdb
15/01/2012 18:13:45 : INFO  : Building d1zvfa1.9.pdb
15/01/2012 18:14:04 : INFO  : Building d1yfua1.10.pdb
15/01/2012 18:14:17 : INFO  : Building c1wqsA_.11.pdb
15/01/2012 18:14:32 : INFO  : Building d1g31a_.12.pdb
15/01/2012 18:14:44 : INFO  : Building d2qfaa1.13.pdb
15/01/2012 18:14:57 : INFO  : Building c3jsbA_.14.pdb
15/01/2012 18:15:11 : INFO  : Building c1hf9B_.15.pdb
15/01/2012 18:15:23 : INFO  : Building c2quoA_.16.pdb
15/01/2012 18:15:35 : INFO  : Building d2raxa1.17.pdb
15/01/2012 18:15:47 : INFO  : Building d1m4ma_.18.pdb
15/01/2012 18:16:00 : INFO  : Building c2oa9B_.19.pdb
15/01/2012 18:16:12 : INFO  : Building c2w3zA_.20.pdb
15/01/2012 18:17:11 : INFO  : Finished HH model building
15/01/2012 18:17:12 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
15/01/2012 18:18:21 : INFO  : html domain output complete ID '49090ff2c04b7be7'
15/01/2012 18:32:27 : INFO  : Run end  : Sun Jan 15 18:32:26 GMT 2012
