Phyre 2 alignment of P0A832 with c1h2dA_

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Job Description | P0A832
Confidence | 3.31% | Date | Thu Jan 5 11:06:45 GMT 2012
Rank | 90 | Aligned Residues | 23
% Identity | 22% | Template | c1h2dA_
PDB info | PDB header:virus/viral protein | Chain: A: PDB Molecule:matrix protein vp40; | PDBTitle: ebola virus matrix protein vp40 n-terminal domain in2 complex with rna (low-resolution vp40[31-212] variant).
Resolution | 2.6 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | D | G | E | A | F | L | F | G | A | N | I | T | P | M | A | V | A | S | T | H | V | V | C | D
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |
Template Sequence |  | G | N | Q | A | F | L | Q | E | F | V | L | P | P | V | Q | L | P | Q | . | Y | F | T | F | D
Template Known Secondary structure |  | S |  |  |  |  |  |  |  |  |  | S |  | S |  |  |  |  | S | . | S |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 153 | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 |  | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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