Phyre 2 alignment of P0A832 with d2nlya1

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Job Description | P0A832
Confidence | 7.96% | Date | Thu Jan 5 11:06:45 GMT 2012
Rank | 23 | Aligned Residues | 26
% Identity | 19% | Template | d2nlya1
SCOP info | 7-stranded beta/alpha barrel | Glycoside hydrolase/deacetylase | Divergent polysaccharide deacetylase
Resolution | 2.50

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 90 | . | . | . |  |  |  |  | . | . | . |  |  |  |  | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  | . | . | . | . |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  | . | . | . | . |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | L | L | L | N | . | . | . | . | Q | R | E | . | . | . | . | L | D | S | L | Y | G | R | V | N | R | E | G | Y | T | V | V | A | L | S
Query Conservation |  |  |  |  |  | . | . | . | . |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  | . | . | . | . |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | I | G | H | V | G | V | R | G | D | E | T | Y | A | G | I | R | S | M | L | D | E | F | Q | A | E | S | I | Q | L | V | P | V | S
Template Known Secondary structure |  |  |  |  |  |  | S | T | T |  |  |  |  |  |  |  |  | G | G | G |  |  |  |  |  |  | T | T |  |  |  |  |  | G | G
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 217 | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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